LOCUS       XP_016674392             308 aa            linear   PLN 06-AUG-2024
DEFINITION  ricin B-like lectin R40G3 [Gossypium hirsutum].
ACCESSION   XP_016674392
VERSION     XP_016674392.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818903.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674392.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..308
                     /product="ricin B-like lectin R40G3"
                     /calculated_mol_wt=34989
     Region          158..307
                     /region_name="beta-trefoil_Ricin_AtEULS3-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in Arabidopsis thaliana Ricin B-like lectin EULS3
                     (AtEULS3) and similar proteins; cd23431"
                     /db_xref="CDD:467309"
     Site            order(173..176,180,182,185,190..191)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467309"
     Site            order(224..227,234,236,239,246..247)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467309"
     Site            order(273..276,291,293,300..301)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467309"
     CDS             1..308
                     /gene="LOC107893814"
                     /coded_by="XM_016818903.2:134..1060"
                     /db_xref="GeneID:107893814"
ORIGIN      
        1 mefpfghnrs hthhhrndde enqerpppph phphlhhhef tppyppppsy qqppgfvgpy
       61 pppppssyfh qpgfdgpppp syfqqpgfpp ppphqppsyq yqqpphvthv hhqpehspsn
      121 yspppasvsh vahessqgrv ddhpsfrphl ppefykkptv kvyckadpnf hltirdgkvv
      181 lapsdpsdef qhwykdekfs tsvkdevgfp sfslvnkatg qaikhsigas hpvqlvpykp
      241 dhldesvlws eskevrdgyr airminnirl nvdafhgdkk sggiqngtti vlwqwnkgdn
      301 qiwkivpy
//
LOCUS       XP_016674393             313 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-related protein KNOLLE isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674393
VERSION     XP_016674393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818904.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="syntaxin-related protein KNOLLE isoform X1"
                     /calculated_mol_wt=35366
     Region          47..250
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          218..284
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(246,253,256)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            249
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..313
                     /gene="LOC107893818"
                     /coded_by="XM_016818904.2:267..1208"
                     /db_xref="GeneID:107893818"
ORIGIN      
        1 mndlmtksfm nyvdlkkeam kdleagpdyd lemssttntm dqnlglflee aekvkqgmav
       61 irellgklqe sneeskslhk peslkasrnk inndivtvqk kartikaqle emdranaank
      121 rlsgykegtl nyrtriavtn glrnklkelm mdfqglrqkm maeyketvgr syftvtgenp
      181 deetiekiis dgsggegflt ravqehgrgk vletvveiqd rhdaakeiek sllelhqvfl
      241 dmavmveaqg eqmddiehhv mnashyvkdg skelnnakry qrssrkwmci giillllivl
      301 viiipiatsf sss
//
LOCUS       XP_040941003             281 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-related protein KNOLLE isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941003
VERSION     XP_040941003.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085069.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="syntaxin-related protein KNOLLE isoform X2"
                     /calculated_mol_wt=31832
     Region          47..250
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          229..274
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(246,253,256)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            249
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..281
                     /gene="LOC107893818"
                     /coded_by="XM_041085069.1:278..1123"
                     /db_xref="GeneID:107893818"
ORIGIN      
        1 mndlmtksfm nyvdlkkeam kdleagpdyd lemssttntm dqnlglflee aekvkqgmav
       61 irellgklqe sneeskslhk peslkasrnk inndivtvqk kartikaqle emdranaank
      121 rlsgykegtl nyrtriavtn glrnklkelm mdfqglrqkm maeyketvgr syftvtgenp
      181 deetiekiis dgsggegflt ravqehgrgk vletvveiqd rhdaakeiek sllelhqvfl
      241 dmavmveaqg eqmddiehhv mnashyvkdg skelnnakrr k
//
LOCUS       XP_040941004             281 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-related protein KNOLLE isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941004
VERSION     XP_040941004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085070.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="syntaxin-related protein KNOLLE isoform X2"
                     /calculated_mol_wt=31832
     Region          47..250
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          229..274
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(246,253,256)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            249
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..281
                     /gene="LOC107893818"
                     /coded_by="XM_041085070.1:281..1126"
                     /db_xref="GeneID:107893818"
ORIGIN      
        1 mndlmtksfm nyvdlkkeam kdleagpdyd lemssttntm dqnlglflee aekvkqgmav
       61 irellgklqe sneeskslhk peslkasrnk inndivtvqk kartikaqle emdranaank
      121 rlsgykegtl nyrtriavtn glrnklkelm mdfqglrqkm maeyketvgr syftvtgenp
      181 deetiekiis dgsggegflt ravqehgrgk vletvveiqd rhdaakeiek sllelhqvfl
      241 dmavmveaqg eqmddiehhv mnashyvkdg skelnnakrr k
//
LOCUS       XP_016674394             197 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB114 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674394
VERSION     XP_016674394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="transcription factor MYB114 isoform X1"
                     /calculated_mol_wt=22246
     Region          6..>112
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..197
                     /gene="LOC107893819"
                     /coded_by="XM_016818905.2:127..720"
                     /db_xref="GeneID:107893819"
ORIGIN      
        1 mggvawteee dyllkkcier ygegkwhrip vlaglkrcrk scrlrwlnyl rpnikrgsfa
       61 aeevnliinl hsllgnrwsl iagrlpgrta ndvknywnch lskkltyapq seddqtaaat
      121 ttasmkprsp ahvspntqqe tsvwapfhdv qvnqqgqeva aeepgtllgd lefdeggssk
      181 wdwddfifnm dlwtasl
//
LOCUS       XP_040941005             174 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941005
VERSION     XP_040941005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085071.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..174
                     /product="transcription factor MYB1 isoform X2"
                     /calculated_mol_wt=19642
     Region          <13..>82
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..174
                     /gene="LOC107893819"
                     /coded_by="XM_041085071.1:122..646"
                     /db_xref="GeneID:107893819"
ORIGIN      
        1 mekgsgieyl fwlrcrkscr lrwlnylrpn ikrgsfaaee vnliinlhsl lgnrwsliag
       61 rlpgrtandv knywnchlsk kltyapqsed dqtaaattta smkprspahv spntqqetsv
      121 wapfhdvqvn qqgqevaaee pgtllgdlef deggsskwdw ddfifnmdlw tasl
//
LOCUS       XP_016674398             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674398
VERSION     XP_016674398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818909.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..185
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20503
     CDS             1..185
                     /gene="LOC107893820"
                     /coded_by="XM_016818909.2:331..888"
                     /db_xref="GeneID:107893820"
ORIGIN      
        1 mddynckrsg qipafgdwdh atelpitqyf esareaglig fssssakpkp yltvdlktkh
       61 prnhvpvrkq vsrvkekreg sggggplvte ekkagrvggv tepprklhyq yhhrhphhhv
      121 pnnindcnkq hgndvvppkr lpvdedlyki tpeilhsskp kkmsgffscl lpacatstts
      181 epdla
//
LOCUS       XP_016674397             184 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674397
VERSION     XP_016674397.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674397.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..184
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=20375
     CDS             1..184
                     /gene="LOC107893820"
                     /coded_by="XM_016818908.2:306..860"
                     /db_xref="GeneID:107893820"
ORIGIN      
        1 mddynckrsg qipafgdwdh atelpitqyf esareaglig fssssakpkp yltvdlktkh
       61 prnhvpvrkv srvkekregs ggggplvtee kkagrvggvt epprklhyqy hhrhphhhvp
      121 nnindcnkqh gndvvppkrl pvdedlykit peilhsskpk kmsgffscll pacatsttse
      181 pdla
//
LOCUS       XP_040941006             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941006
VERSION     XP_040941006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085072.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085072.1:1326..1919"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941007             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941007
VERSION     XP_040941007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085073.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085073.1:1301..1894"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941008             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941008
VERSION     XP_040941008.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085074.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085074.1:914..1507"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941009             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941009
VERSION     XP_040941009.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085075.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085075.1:1206..1799"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941010             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941010
VERSION     XP_040941010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085076.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085076.1:1005..1598"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941011             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941011
VERSION     XP_040941011.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085077.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085077.1:1038..1631"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941012             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941012
VERSION     XP_040941012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085078.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20132
     CDS             1..197
                     /gene="LOC107893821"
                     /coded_by="XM_041085078.1:880..1473"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaennilkm rkvydaflae
      181 fplcygyctt kqvfsgv
//
LOCUS       XP_040941013             192 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941013
VERSION     XP_040941013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085079.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..192
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19512
     CDS             1..192
                     /gene="LOC107893821"
                     /coded_by="XM_041085079.1:1514..2092"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaereqklq nsnrdaishv
      181 lfksviccla ni
//
LOCUS       XP_040941014             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941014
VERSION     XP_040941014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085080.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=18358
     CDS             1..181
                     /gene="LOC107893821"
                     /coded_by="XM_041085080.1:1513..2058"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 kpaggstdet avavgntaad askaaacnyp lngnvvnaag nattvengna fdnlggdsta
      121 pefvdgsapt msaeeerlws ilransldfn awtalieete kvaelfyvlt ggkwnkknql
      181 h
//
LOCUS       XP_016674400             158 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 39 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016674400
VERSION     XP_016674400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="pre-mRNA-processing factor 39 isoform X4"
                     /calculated_mol_wt=16502
     CDS             1..158
                     /gene="LOC107893821"
                     /coded_by="XM_016818911.2:1321..1797"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaennilk mrkvydafla efplcygyct tkqvfsgv
//
LOCUS       XP_016674402             158 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 39 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016674402
VERSION     XP_016674402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818913.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="pre-mRNA-processing factor 39 isoform X4"
                     /calculated_mol_wt=16502
     CDS             1..158
                     /gene="LOC107893821"
                     /coded_by="XM_016818913.2:1000..1476"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaennilk mrkvydafla efplcygyct tkqvfsgv
//
LOCUS       XP_016674401             158 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 39 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016674401
VERSION     XP_016674401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="pre-mRNA-processing factor 39 isoform X4"
                     /calculated_mol_wt=16502
     CDS             1..158
                     /gene="LOC107893821"
                     /coded_by="XM_016818912.2:1100..1576"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaennilk mrkvydafla efplcygyct tkqvfsgv
//
LOCUS       XP_040941015             157 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941015
VERSION     XP_040941015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085081.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..157
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=16431
     CDS             1..157
                     /gene="LOC107893821"
                     /coded_by="XM_041085081.1:913..1386"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 nattvengna fdnlggdsta pefvdgsapt msaeeerlws ilransldfn awtalieete
      121 kvaennilkm rkvydaflae fplcygyctt kqvfsgv
//
LOCUS       XP_040941016             153 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941016
VERSION     XP_040941016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085082.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=15882
     CDS             1..153
                     /gene="LOC107893821"
                     /coded_by="XM_041085082.1:1415..1876"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaereqkl qnsnrdaish vlfksviccl ani
//
LOCUS       XP_040941017             153 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941017
VERSION     XP_040941017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085083.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=15882
     CDS             1..153
                     /gene="LOC107893821"
                     /coded_by="XM_041085083.1:1319..1780"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaereqkl qnsnrdaish vlfksviccl ani
//
LOCUS       XP_040941018             153 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941018
VERSION     XP_040941018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085084.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=15882
     CDS             1..153
                     /gene="LOC107893821"
                     /coded_by="XM_041085084.1:907..1368"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaereqkl qnsnrdaish vlfksviccl ani
//
LOCUS       XP_040941019             153 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941019
VERSION     XP_040941019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085085.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=15882
     CDS             1..153
                     /gene="LOC107893821"
                     /coded_by="XM_041085085.1:586..1047"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamyda
       61 gnattvengn afdnlggdst apefvdgsap tmsaeeerlw silransldf nawtalieet
      121 ekvaereqkl qnsnrdaish vlfksviccl ani
//
LOCUS       XP_040941020             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941020
VERSION     XP_040941020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085086.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=15811
     CDS             1..152
                     /gene="LOC107893821"
                     /coded_by="XM_041085086.1:1419..1877"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 nattvengna fdnlggdsta pefvdgsapt msaeeerlws ilransldfn awtalieete
      121 kvaereqklq nsnrdaishv lfksviccla ni
//
LOCUS       XP_040941021             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941021
VERSION     XP_040941021.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085087.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=15811
     CDS             1..152
                     /gene="LOC107893821"
                     /coded_by="XM_041085087.1:1101..1559"
                     /db_xref="GeneID:107893821"
ORIGIN      
        1 mgdseavvad ssammdytsa aynsagsgay ssqatgypta pgghpnsagq egqssamydg
       61 nattvengna fdnlggdsta pefvdgsapt msaeeerlws ilransldfn awtalieete
      121 kvaereqklq nsnrdaishv lfksviccla ni
//
LOCUS       XP_016674407              63 aa            linear   PLN 06-AUG-2024
DEFINITION  anaphase-promoting complex subunit 13 [Gossypium hirsutum].
ACCESSION   XP_016674407
VERSION     XP_016674407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..63
                     /product="anaphase-promoting complex subunit 13"
                     /calculated_mol_wt=7096
     CDS             1..63
                     /gene="LOC107893823"
                     /coded_by="XM_016818918.2:298..489"
                     /db_xref="GeneID:107893823"
ORIGIN      
        1 maelslgili divdeewmrd tlpdddlplp pvmvartddt edsnhetqqa ddntwrdlel
       61 stq
//
LOCUS       XP_016674409              63 aa            linear   PLN 06-AUG-2024
DEFINITION  anaphase-promoting complex subunit 13 [Gossypium hirsutum].
ACCESSION   XP_016674409
VERSION     XP_016674409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..63
                     /product="anaphase-promoting complex subunit 13"
                     /calculated_mol_wt=7096
     CDS             1..63
                     /gene="LOC107893823"
                     /coded_by="XM_016818920.2:301..492"
                     /db_xref="GeneID:107893823"
ORIGIN      
        1 maelslgili divdeewmrd tlpdddlplp pvmvartddt edsnhetqqa ddntwrdlel
       61 stq
//
LOCUS       XP_016674410              63 aa            linear   PLN 06-AUG-2024
DEFINITION  anaphase-promoting complex subunit 13 [Gossypium hirsutum].
ACCESSION   XP_016674410
VERSION     XP_016674410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818921.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..63
                     /product="anaphase-promoting complex subunit 13"
                     /calculated_mol_wt=7096
     CDS             1..63
                     /gene="LOC107893823"
                     /coded_by="XM_016818921.2:414..605"
                     /db_xref="GeneID:107893823"
ORIGIN      
        1 maelslgili divdeewmrd tlpdddlplp pvmvartddt edsnhetqqa ddntwrdlel
       61 stq
//
LOCUS       XP_040941022              63 aa            linear   PLN 06-AUG-2024
DEFINITION  anaphase-promoting complex subunit 13 [Gossypium hirsutum].
ACCESSION   XP_040941022
VERSION     XP_040941022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085088.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..63
                     /product="anaphase-promoting complex subunit 13"
                     /calculated_mol_wt=7096
     CDS             1..63
                     /gene="LOC107893823"
                     /coded_by="XM_041085088.1:488..679"
                     /db_xref="GeneID:107893823"
ORIGIN      
        1 maelslgili divdeewmrd tlpdddlplp pvmvartddt edsnhetqqa ddntwrdlel
       61 stq
//
LOCUS       XP_016674411             435 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 9 [Gossypium hirsutum].
ACCESSION   XP_016674411
VERSION     XP_016674411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..435
                     /product="U-box domain-containing protein 9"
                     /calculated_mol_wt=47864
     Region          59..108
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(60,62..65,84,88,97)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(211,215,219,253,257,261,294,298,302)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          227..264
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          228..>336
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          269..302
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..435
                     /gene="LOC107893824"
                     /coded_by="XM_016818922.2:438..1745"
                     /db_xref="GeneID:107893824"
ORIGIN      
        1 maekevssaa aggreeelkk elqsvvkkiv dednygieit lkaisilsdl sdtvltkkfr
       61 cpisgeimgd pvvlssglty drpsiqkwln egnltcpqsk evlshtiltp nclvrkliss
      121 wckghgvavp rshqdsngem stefdrvyfn slvtkmfssl tdrkeaakel rrlttaapsy
      181 ravffeftdp isrligpile gsvdsdpelq edlittfmnl lvdsdnmklv adhpdaipll
      241 ikslefgtie trknaavals mlssdndrrl lignagapmp llqllreghp iamkeaasai
      301 lnqcveynnk ekfielgavk vllekiregk lvdelinlva qlsthpkavn elseldtvhc
      361 llgiiretes ertkencvai lynvclndvg llkviwtegi ehqtlaklvd tgtarakrka
      421 talatkigkl fptvl
//
LOCUS       XP_016674418             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674418
VERSION     XP_016674418.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674418.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818929.2:651..2195"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674414             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674414
VERSION     XP_016674414.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674414.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818925.2:792..2336"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_040941023             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_040941023
VERSION     XP_040941023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085089.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_041085089.1:651..2195"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674413             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674413
VERSION     XP_016674413.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674413.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818924.2:792..2336"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_040941024             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_040941024
VERSION     XP_040941024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085090.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_041085090.1:651..2195"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_040941025             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_040941025
VERSION     XP_040941025.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085091.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_041085091.1:651..2195"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674416             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674416
VERSION     XP_016674416.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674416.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818927.2:792..2336"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674417             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674417
VERSION     XP_016674417.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674417.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818928.2:792..2336"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_040941026             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_040941026
VERSION     XP_040941026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085092.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_041085092.1:651..2195"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674412             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674412
VERSION     XP_016674412.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674412.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818923.2:815..2359"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_040941027             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_040941027
VERSION     XP_040941027.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085093.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_041085093.1:792..2336"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674415             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_016674415
VERSION     XP_016674415.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674415.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_016818926.2:841..2385"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_040941028             514 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Gossypium
            hirsutum].
ACCESSION   XP_040941028
VERSION     XP_040941028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085094.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="U11/U12 small nuclear ribonucleoprotein 48 kDa
                     protein"
                     /calculated_mol_wt=58984
     CDS             1..514
                     /gene="LOC107893825"
                     /coded_by="XM_041085094.1:792..2336"
                     /db_xref="GeneID:107893825"
ORIGIN      
        1 mmkggdlrkw lvansprygi videymghhi vllvrlclka vareatslve agmeykedkv
       61 kesdvnlarr mfecpvllqv lmwlgsqlsv lygelngkff ainmikqcvl egasrlllfp
      121 mqekvinsln lgqesqslft ngveeiklee pteqsnepvk tvdgsigvgt ilvsqvaaav
      181 aalhercfle gkikhlqasr ppsryermae hayvserada erkkrpnyrp iidhdglprq
      241 assneetnrt ktreeilaee rdykrrrmsy rgkklkrtkl evmrdiieey teeikkaggi
      301 gcfvkgadee rllssespvp ydhavnageh rkstsdisea vsgspdhygr rshndqhsrs
      361 srfenyslnn feqsrrhcdl edqrrrigee khredhsrts rhrshggsdr rrshrrerdd
      421 vestratlye rgsrssiskl rdykssysvs nssddfhekk nylkldsrdq nrrssyenqt
      481 sgssaqngfd drynplesed mfddvlggky vrpd
//
LOCUS       XP_016674421            1286 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PIR isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674421
VERSION     XP_016674421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1286
                     /product="protein PIR isoform X1"
                     /calculated_mol_wt=145959
     Region          3..1284
                     /region_name="PIR"
                     /note="Protein PIR; Provisional; PLN03099"
                     /db_xref="CDD:215574"
     CDS             1..1286
                     /gene="LOC107893827"
                     /coded_by="XM_016818932.2:197..4057"
                     /db_xref="GeneID:107893827"
ORIGIN      
        1 maavpveeai aalstfsled eqpevqgpav lvstergsti spieysdvsa yrlsltedtk
       61 alnqlntliq dgkemasvly tyrscvkalp qlpesmkhsq adlyletyqv ldlemsrlre
      121 iqrwqasaat klaadmqrfs rperringpt ithlwsmlkl ldvlvqldhl knakasipnd
      181 fswykrtftq vsiqwpdtds mreelddlqi flstrwaill nlhvemfrvn nvedilqvli
      241 vfavesleld fallfperhm llrvlpvlvv matssekdse slykrvkinr linifkndpv
      301 ipafpdlhls ptailkelsn yfqkfssqtr lltlpsphel ppreaqdyqr hylivnhiga
      361 iraehddfsi rfasamnqll llkstdgadv ewckevkgnm ydmvvegfql lsrwtarvwe
      421 qcawkfsrpc kdvgpsesqe lsssysdyek vvrynysaee rkalvelvsy iksvgsmmqr
      481 sdtliadalw etihaevqdf vqntlatmlr ttfrkkkdls rilsdmrtls adwmantnkp
      541 dsefqslqhg gdesrgnffy prpvapttaq vhclqfliye vvsggnlrkp gglfgnsgse
      601 ipvndlkqle tffyklsffl hildysatia tltdlgflwf refylessrv iqfpiecslp
      661 wmlvdhvles qsagllesvl mpfdiyndsa qhalvvlkqr flydeieaev dhcfdifvtk
      721 lceaiftyyk swsaselldp sflfaldnge kysiqpmrft sllkmtrvkl lgrtidlrsl
      781 iaermnkvfr enleflfdrf esqdlcaive leklidilkh shellskdls idsfslmlne
      841 mqenislvsf ssrlasqiws emqsdflpnf ilcnttqrfv rsskvplvpv qkpsvphakp
      901 nfycgtqdln sahqsfarlh sgffgiphmi slvkllgsrs lpwliralld hisnkiatle
      961 pmitglqetl pksigllpfd ggvtgcmrlv keqlswgtks elkaevlrgi keigsvlywm
     1021 glldivlrel dtthfmqtap wlgllpgadg qmlsqnages pvvnlfksat aatvsnprcr
     1081 npasfytmsk qaeaadllyk anlntgsvle yalaftsaal dkycskwsaa pktgfiditt
     1141 skdfyriysg lqigyleqsv qlqpnnhdml gdsvawggct iiyllgqqlh felfdfsyqi
     1201 lnvaeveaas imqthksphs gqgwdsmlea mkkarrlnnh vfsmlkarcp ledkmacaik
     1261 qsgaplprik fentvsafet lpqkgt
//
LOCUS       XP_016674422            1030 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PIR isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674422
VERSION     XP_016674422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818933.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1030
                     /product="protein PIR isoform X2"
                     /calculated_mol_wt=117725
     Region          3..>1029
                     /region_name="PIR"
                     /note="Protein PIR; Provisional; PLN03099"
                     /db_xref="CDD:215574"
     CDS             1..1030
                     /gene="LOC107893827"
                     /coded_by="XM_016818933.2:197..3289"
                     /db_xref="GeneID:107893827"
ORIGIN      
        1 maavpveeai aalstfsled eqpevqgpav lvstergsti spieysdvsa yrlsltedtk
       61 alnqlntliq dgkemasvly tyrscvkalp qlpesmkhsq adlyletyqv ldlemsrlre
      121 iqrwqasaat klaadmqrfs rperringpt ithlwsmlkl ldvlvqldhl knakasipnd
      181 fswykrtftq vsiqwpdtds mreelddlqi flstrwaill nlhvemfrvn nvedilqvli
      241 vfavesleld fallfperhm llrvlpvlvv matssekdse slykrvkinr linifkndpv
      301 ipafpdlhls ptailkelsn yfqkfssqtr lltlpsphel ppreaqdyqr hylivnhiga
      361 iraehddfsi rfasamnqll llkstdgadv ewckevkgnm ydmvvegfql lsrwtarvwe
      421 qcawkfsrpc kdvgpsesqe lsssysdyek vvrynysaee rkalvelvsy iksvgsmmqr
      481 sdtliadalw etihaevqdf vqntlatmlr ttfrkkkdls rilsdmrtls adwmantnkp
      541 dsefqslqhg gdesrgnffy prpvapttaq vhclqfliye vvsggnlrkp gglfgnsgse
      601 ipvndlkqle tffyklsffl hildysatia tltdlgflwf refylessrv iqfpiecslp
      661 wmlvdhvles qsagllesvl mpfdiyndsa qhalvvlkqr flydeieaev dhcfdifvtk
      721 lceaiftyyk swsaselldp sflfaldnge kysiqpmrft sllkmtrvkl lgrtidlrsl
      781 iaermnkvfr enleflfdrf esqdlcaive leklidilkh shellskdls idsfslmlne
      841 mqenislvsf ssrlasqiws emqsdflpnf ilcnttqrfv rsskvplvpv qkpsvphakp
      901 nfycgtqdln sahqsfarlh sgffgiphmi slvkllgsrs lpwliralld hisnkiatle
      961 pmitglqetl pksigllpfd ggvtgcmrlv keqlswgtks elkaevlrgi keigsvlywm
     1021 glldivllpl
//
LOCUS       XP_016674423             900 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674423
VERSION     XP_016674423.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674423.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..900
                     /product="uncharacterized protein"
                     /calculated_mol_wt=101703
     Region          107..136
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          142..170
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <206..>372
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          214..240
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          246..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          283..315
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..392
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          536..568
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     CDS             1..900
                     /gene="LOC107893828"
                     /coded_by="XM_016818934.2:85..2787"
                     /db_xref="GeneID:107893828"
ORIGIN      
        1 msllfshalp psvpplsghr navvfatist qkrktssrrk krqpqenkde gnatfsssng
       61 stavsaleks lrltfmeelm qkarsrdtvg vsdviydmia agltpgprsf hglvvahvln
      121 gdvegalqal rrelgvgvrp lhetlvsmvr lfgskglatk glevlaamek lnydirqawi
      181 ilveelvrnk yledanavfl kgakgglrat nelydlmiee dckagdhsna leiayemeaa
      241 grmattfhfn cllsvqatcg ipeiafatfe nmeygeeymk pdtetynwvi qaytraesyd
      301 rvqdvaellg mmvedhkrlq pnvktyallv ecftkycvvr eairhfralk nyeggtivlh
      361 negnfddpls lylralcreg rvvellqale amskdnqpip pramilsrky rtlvsswiep
      421 lqeeaelgye idyiaryiee ggltgerkrw vprrgktpld pdatgfiysn pmetsfkqrc
      481 leewkiyhrk llktlqnegl aalgdatesd ymrvverlrk iikgpdqnvl kpkaaskmvv
      541 selkeeleaq glptdgtrnv lyqrvqkarr inrsrgrplw vppveeeeee vdeeldelis
      601 rikleegnte fwkrrflgeg lnvnqvklid edeseaadde ldesdvveda akdieeeege
      661 eeeeveqtes qevdrikdke veakkplqmi gvqllkdsdq tttrskksrr rssrvsvedd
      721 ddedwfpedi feafqemrdr kvfdvedmyt iadawgwtwe relknkpprr wsqewevela
      781 iqvmqkviel ggtptigdca milraaikap vpsaflkilq kthslgyvfg splydevisl
      841 cidlgeldaa iaivadlett giavpdqtld rvisarqtmd tsgndtssss ppppppptss
//
LOCUS       XP_016674424             362 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g33370 [Gossypium hirsutum].
ACCESSION   XP_016674424
VERSION     XP_016674424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="GDSL esterase/lipase At5g33370"
                     /calculated_mol_wt=39597
     Region          25..343
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(32,109,165,323,326)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(32,323,326)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(32,109,165)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..362
                     /gene="LOC107893829"
                     /coded_by="XM_016818935.2:57..1145"
                     /db_xref="GeneID:107893829"
ORIGIN      
        1 massaslmvl allmasiaai aearaffifg dslvdsgnnn ylettarads ppygidyptg
       61 rptgrfsngl nipdligkqi glsesplpyl spdfngkkll lganfasagv gilndtgvqf
      121 vnilrmyrql elfeeykrrl sglvgtrqan rvvsqalvli tvggndfvnn yylvpfsars
      181 rqyslpdyvr fliseyrkll mklykagarr vlvtgtgplg cvpaelamrg nnggcsqelq
      241 raaslynpql vqminglnak igrdvfisan tqkmhndfvs dpqafgftts eiaccgqgpy
      301 nglglctqls nlcpnrdlyt fwdpfhpsek anrliveqim rgsneymnpt nlstiiafds
      361 km
//
LOCUS       XP_016674425             129 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674425
VERSION     XP_016674425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="importin beta-like protein KAP120 isoform X1"
                     /calculated_mol_wt=14182
     Region          25..>99
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..129
                     /gene="LOC107893830"
                     /coded_by="XM_016818936.2:461..850"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mevifvheer ysapsvarss sfktlsieka virglllstl ddpnrklcis vsmavaaiav
       61 ydwpeswpdl lpfllkligd qtrmngvkky gicalintia fcflilnifs scfggliavl
      121 dglhrclfl
//
LOCUS       XP_016674426             129 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674426
VERSION     XP_016674426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818937.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="importin beta-like protein KAP120 isoform X1"
                     /calculated_mol_wt=14182
     Region          25..>99
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..129
                     /gene="LOC107893830"
                     /coded_by="XM_016818937.2:586..975"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mevifvheer ysapsvarss sfktlsieka virglllstl ddpnrklcis vsmavaaiav
       61 ydwpeswpdl lpfllkligd qtrmngvkky gicalintia fcflilnifs scfggliavl
      121 dglhrclfl
//
LOCUS       XP_040941029             129 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941029
VERSION     XP_040941029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085095.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="importin beta-like protein KAP120 isoform X1"
                     /calculated_mol_wt=14182
     Region          25..>99
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..129
                     /gene="LOC107893830"
                     /coded_by="XM_041085095.1:579..968"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mevifvheer ysapsvarss sfktlsieka virglllstl ddpnrklcis vsmavaaiav
       61 ydwpeswpdl lpfllkligd qtrmngvkky gicalintia fcflilnifs scfggliavl
      121 dglhrclfl
//
LOCUS       XP_016674427             129 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674427
VERSION     XP_016674427.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818938.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="importin beta-like protein KAP120 isoform X1"
                     /calculated_mol_wt=14182
     Region          25..>99
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..129
                     /gene="LOC107893830"
                     /coded_by="XM_016818938.2:454..843"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mevifvheer ysapsvarss sfktlsieka virglllstl ddpnrklcis vsmavaaiav
       61 ydwpeswpdl lpfllkligd qtrmngvkky gicalintia fcflilnifs scfggliavl
      121 dglhrclfl
//
LOCUS       XP_016674428             127 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674428
VERSION     XP_016674428.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818939.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..127
                     /product="importin beta-like protein KAP120 isoform X2"
                     /calculated_mol_wt=13857
     Region          23..>97
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..127
                     /gene="LOC107893830"
                     /coded_by="XM_016818939.2:303..686"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mtevaeerys apsvarsssf ktlsiekavi rglllstldd pnrklcisvs mavaaiavyd
       61 wpeswpdllp fllkligdqt rmngvkkygi calintiafc flilnifssc fggliavldg
      121 lhrclfl
//
LOCUS       XP_040941030             127 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941030
VERSION     XP_040941030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085096.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..127
                     /product="importin beta-like protein KAP120 isoform X2"
                     /calculated_mol_wt=13857
     Region          23..>97
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..127
                     /gene="LOC107893830"
                     /coded_by="XM_041085096.1:296..679"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mtevaeerys apsvarsssf ktlsiekavi rglllstldd pnrklcisvs mavaaiavyd
       61 wpeswpdllp fllkligdqt rmngvkkygi calintiafc flilnifssc fggliavldg
      121 lhrclfl
//
LOCUS       XP_040941031             127 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like protein KAP120 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941031
VERSION     XP_040941031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085097.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..127
                     /product="importin beta-like protein KAP120 isoform X2"
                     /calculated_mol_wt=13857
     Region          23..>97
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..127
                     /gene="LOC107893830"
                     /coded_by="XM_041085097.1:421..804"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mtevaeerys apsvarsssf ktlsiekavi rglllstldd pnrklcisvs mavaaiavyd
       61 wpeswpdllp fllkligdqt rmngvkkygi calintiafc flilnifssc fggliavldg
      121 lhrclfl
//
LOCUS       XP_040941032              79 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941032
VERSION     XP_040941032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085098.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..79
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9101
     CDS             1..79
                     /gene="LOC107893830"
                     /coded_by="XM_041085098.1:194..433"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mdletenria aillkeaael krqadkegvh vylqqpkvls altvqicidd rssrqlsady
       61 fyqlwmilie nfayqsvwl
//
LOCUS       XP_016674429              79 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674429
VERSION     XP_016674429.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818940.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..79
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9101
     CDS             1..79
                     /gene="LOC107893830"
                     /coded_by="XM_016818940.2:152..391"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mdletenria aillkeaael krqadkegvh vylqqpkvls altvqicidd rssrqlsady
       61 fyqlwmilie nfayqsvwl
//
LOCUS       XP_040941033              79 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941033
VERSION     XP_040941033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085099.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..79
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9101
     CDS             1..79
                     /gene="LOC107893830"
                     /coded_by="XM_041085099.1:291..530"
                     /db_xref="GeneID:107893830"
ORIGIN      
        1 mdletenria aillkeaael krqadkegvh vylqqpkvls altvqicidd rssrqlsady
       61 fyqlwmilie nfayqsvwl
//
LOCUS       XP_016674432             369 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g33370 [Gossypium hirsutum].
ACCESSION   XP_016674432
VERSION     XP_016674432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..369
                     /product="GDSL esterase/lipase At5g33370"
                     /calculated_mol_wt=40144
     Region          31..348
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(38,114,170,328,331)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(38,328,331)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(38,114,170)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..369
                     /gene="LOC107893833"
                     /coded_by="XM_016818943.2:59..1168"
                     /db_xref="GeneID:107893833"
ORIGIN      
        1 mansmvlvsl malgllmvfs tttqveaaar affvfgdslv dngnnnylat taradsppyg
       61 idtptrrptg rfsngknipd fisdalgsep tlpylspelr gekllvganf asagvgilnd
      121 tgiqfiniir mfrqlqyfqd yqtrlaelvg ndeaqqivsd slvlitvggn dfvnnyflip
      181 fsarsrqfll pdyvtylise yrkilmrlhd lgarrvlvtg tgplgcvpae ramrspngec
      241 apelqqaasl fnpqlvqmin glnseygani fiaantqlqt sdfitnpgay gfttskiacc
      301 gqgpyngigl ctvfsnlcsn rdeyvfwdpf hpserangii vnnivsgstn yvspmnlstl
      361 lalnsdtrn
//
LOCUS       XP_040941034              98 aa            linear   PLN 06-AUG-2024
DEFINITION  BRCA1-associated RING domain protein 1-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941034
VERSION     XP_040941034.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085100.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="BRCA1-associated RING domain protein 1-like
                     isoform X1"
                     /calculated_mol_wt=10617
     Region          36..87
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..98
                     /gene="LOC107894881"
                     /coded_by="XM_041085100.1:342..638"
                     /db_xref="GeneID:107894881"
ORIGIN      
        1 mpnivsevnp nhsglgavse sgvatrsans yflpflmvkf akmisvtvsk fwrpdvthvi
       61 astdengact rtlkvlvais ngkwvlklnc efvvlflf
//
LOCUS       XP_040941035              91 aa            linear   PLN 06-AUG-2024
DEFINITION  BRCA1-associated RING domain protein 1-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941035
VERSION     XP_040941035.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085101.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..91
                     /product="BRCA1-associated RING domain protein 1-like
                     isoform X2"
                     /calculated_mol_wt=9750
     Region          36..87
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..91
                     /gene="LOC107894881"
                     /coded_by="XM_041085101.1:342..617"
                     /db_xref="GeneID:107894881"
ORIGIN      
        1 mpnivsevnp nhsglgavse sgvatrsans yflpflmvkf akmisvtvsk fwrpdvthvi
       61 astdengact rtlkvlvais ngkwvlklnc k
//
LOCUS       XP_040941036             475 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase SUVR4 [Gossypium hirsutum].
ACCESSION   XP_040941036
VERSION     XP_040941036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085102.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..475
                     /product="histone-lysine N-methyltransferase SUVR4"
                     /calculated_mol_wt=53791
     Region          6..61
                     /region_name="WIYLD"
                     /note="Ubiquitin-binding WIYLD domain; pfam10440"
                     /db_xref="CDD:431288"
     Region          180..448
                     /region_name="SET_SETDB-like"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and 2 (SETDB2),
                     suppressor of variegation 3-9 homologs, SUV39H1 and
                     SUV39H2, euchromatic histone-lysine N-methyltransferase
                     EHMT1 and EHMT2, and similar proteins; cd10538"
                     /db_xref="CDD:380936"
     Site            order(325..327,344,351,354..355,357,368..372,390,401..405,
                     414,416,429,445,447)
                     /site_type="active"
                     /db_xref="CDD:380936"
     Site            order(325..327,368..369,401..405,447)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380936"
     Site            order(370..372,390,414,429,447)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380936"
     Site            407
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380936"
     CDS             1..475
                     /gene="LOC107894555"
                     /coded_by="XM_041085102.1:270..1697"
                     /db_xref="GeneID:107894555"
ORIGIN      
        1 mmsvrerark afhatralgl pdqevtpvle hllklfnnnw dliesedyra lidayfelke
       61 nkgeddrknv vgdygessrl pkrlclqdpe dqasptkgsa rqilspeelg kpsvnlqqga
      121 tflnkkdsss sgcsnsckkp qqqpvtcekn rplhiindit kgtenvkisl vgeignqelp
      181 kftymrdnii yqdayvhisl arvadedccs gcsgdclsvs ipcacahetg gefayttdgq
      241 lrdkflkaci smkqdpeghd svycqdcple rlkneykpek ckghlvrkfi kecwrkcgcn
      301 mqcgnrvvqr gitcklqvfw tregkgwgvk tlqdlpkgtf vceyvgeilt ntelfernlk
      361 gsgnekhtyp vtldadwgse rvlkdeealc ldatfcgnva rfinhrcfda nlidipveve
      421 tpdrhyyhla lfttrdvras eeltwdygid fnddehpika fkcccrsafc rdvkr
//
LOCUS       XP_016674433             376 aa            linear   PLN 06-AUG-2024
DEFINITION  1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Gossypium
            hirsutum].
ACCESSION   XP_016674433
VERSION     XP_016674433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818944.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..376
                     /product="1-aminocyclopropane-1-carboxylate oxidase
                     homolog 1"
                     /calculated_mol_wt=42828
     Region          38..353
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..376
                     /gene="LOC107893835"
                     /coded_by="XM_016818944.2:66..1196"
                     /db_xref="GeneID:107893835"
ORIGIN      
        1 maemeignde qkmlpkkvhk dndrakevka fddtkagvqg lvdvgvvklp pifhmpreyi
       61 hdhptlnghn lhgfqvptid lkhvsdpcir keivdkmrla sekwgffqvi nhgipqdvmk
      121 evlegvrrfh eqpremkmky ysreteivry ytnydlhqsk gaswrdtlic vmapnppppn
      181 mypsacreil veyskrvqsi gevifkllse algldpdhlk digcleghtf gcqyyppcpe
      241 pertlghvrh rdpdfltill qdqigglqvl hqdhwidvpp legaliinig dllqlisndk
      301 frsvehrvla ksvgprisla clfsthleps nrvygplkql lspqnpplye ettiltylns
      361 yksvgglena lsfhkl
//
LOCUS       XP_016674121             445 aa            linear   PLN 06-AUG-2024
DEFINITION  rubisco accumulation factor 1.1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016674121
VERSION     XP_016674121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818632.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..445
                     /product="rubisco accumulation factor 1.1, chloroplastic"
                     /calculated_mol_wt=49711
     Region          80..140
                     /region_name="Raf1_HTH"
                     /note="Rubisco accumulation factor 1 helix turn helix
                     domain; pfam18579"
                     /db_xref="CDD:436593"
     Region          152..261
                     /region_name="Raf1_N"
                     /note="Rubisco accumulation factor 1 alpha helical domain;
                     pfam18578"
                     /db_xref="CDD:436592"
     Region          281..432
                     /region_name="RuBisCo_chap_C"
                     /note="Rubisco Assembly chaperone C-terminal domain;
                     pfam18087"
                     /db_xref="CDD:436262"
     CDS             1..445
                     /gene="LOC107893598"
                     /coded_by="XM_016818632.2:98..1435"
                     /db_xref="GeneID:107893598"
ORIGIN      
        1 mlsstslkpi tnpkipffss fsiqnpslls fhlpfspska llkpisatli pstpqpqqqq
       61 lyqpfrppps plppkfrsld aqgrldvlan rnglwfeyap lipslyqegf sppsieeitg
      121 itgveqntli vasqvresli qsktdedvms ffdtggaell yeirllsasq raeavryive
      181 ngldakgaqd laramkdfpr rkmdkgwksf eyglpgdcls fmyyrlsreh rnpseqrtaa
      241 lmqalqvaes esakkevsqe leggedekpe kdddleyrvw vpvvrmqfge vaeatsvvvl
      301 pvcmaeedtk eileaplecr sggdfgvvea ekgwkrwvvl psweplaglr hggvvvafsd
      361 arvipwksnr wykeeailvv tdrnrkevev daafylakvd ggrlkvdtgs alkemgvkes
      421 lgtvvlvvrp pkeesddqls dedwe
//
LOCUS       XP_016674119             186 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP19-3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674119
VERSION     XP_016674119.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..186
                     /product="peptidyl-prolyl cis-trans isomerase CYP19-3
                     isoform X1"
                     /calculated_mol_wt=20239
     Region          16..181
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(73..74,79,130,132,140)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..186
                     /gene="LOC107893597"
                     /coded_by="XM_016818630.2:258..818"
                     /db_xref="GeneID:107893597"
ORIGIN      
        1 mrfewcvnwv skmsnpkiff diligkakag rvvmelfadv vpktaenfra lctgekgvgq
       61 cgkplhykgs afhriipsfm cqggdftrgn gtggesiygm kfadenfklk htgpgclsma
      121 nagpntngsq ffictektpw ldgkhvvfgk vvdgysvvke mekvgsesgr tlqpvviedc
      181 gqveen
//
LOCUS       XP_040941037             183 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP19-3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941037
VERSION     XP_040941037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085103.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="peptidyl-prolyl cis-trans isomerase CYP19-3
                     isoform X2"
                     /calculated_mol_wt=19777
     Region          13..178
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(70..71,76,127,129,137)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..183
                     /gene="LOC107893597"
                     /coded_by="XM_041085103.1:308..859"
                     /db_xref="GeneID:107893597"
ORIGIN      
        1 mrcvnwvskm snpkiffdil igkakagrvv melfadvvpk taenfralct gekgvgqcgk
       61 plhykgsafh riipsfmcqg gdftrgngtg gesiygmkfa denfklkhtg pgclsmanag
      121 pntngsqffi ctektpwldg khvvfgkvvd gysvvkemek vgsesgrtlq pvviedcgqv
      181 een
//
LOCUS       XP_016674120             174 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP19-3 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016674120
VERSION     XP_016674120.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818631.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..174
                     /product="peptidyl-prolyl cis-trans isomerase CYP19-3
                     isoform X3"
                     /calculated_mol_wt=18672
     Region          4..169
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(61..62,67,118,120,128)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..174
                     /gene="LOC107893597"
                     /coded_by="XM_016818631.2:177..701"
                     /db_xref="GeneID:107893597"
ORIGIN      
        1 msnpkiffdi ligkakagrv vmelfadvvp ktaenfralc tgekgvgqcg kplhykgsaf
       61 hriipsfmcq ggdftrgngt ggesiygmkf adenfklkht gpgclsmana gpntngsqff
      121 ictektpwld gkhvvfgkvv dgysvvkeme kvgsesgrtl qpvviedcgq veen
//
LOCUS       XP_016675253             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675253
VERSION     XP_016675253.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675253.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_016819764.2:1009..1383"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941038             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941038
VERSION     XP_040941038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085104.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085104.1:1061..1435"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941039             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941039
VERSION     XP_040941039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085105.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085105.1:1074..1448"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941040             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941040
VERSION     XP_040941040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085106.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085106.1:995..1369"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941041             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941041
VERSION     XP_040941041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085107.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085107.1:988..1362"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941042             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941042
VERSION     XP_040941042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085108.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085108.1:1047..1421"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941043             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941043
VERSION     XP_040941043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085109.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085109.1:1040..1414"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941044             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941044
VERSION     XP_040941044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085110.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085110.1:1060..1434"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941045             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941045
VERSION     XP_040941045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085111.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085111.1:1053..1427"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941046             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941046
VERSION     XP_040941046.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085112.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085112.1:649..1023"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941047             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941047
VERSION     XP_040941047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085113.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085113.1:686..1060"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941048             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941048
VERSION     XP_040941048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085114.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085114.1:738..1112"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941049             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941049
VERSION     XP_040941049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085115.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14018
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..124
                     /gene="LOC107894494"
                     /coded_by="XM_041085115.1:701..1075"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtvht lafyssilds lavelkaskd fsklyasiai lwlhlslnqp svvycffffl
      121 iffl
//
LOCUS       XP_040941050             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941050
VERSION     XP_040941050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085116.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12142
     Region          1..>29
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..106
                     /gene="LOC107894494"
                     /coded_by="XM_041085116.1:525..845"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mqckplskqq vralcdkake ilmeesnvqd wtglnfqevm deaekirvtv htlafyssil
       61 dslavelkas kdfsklyasi ailwlhlsln qpsvvycfff fliffl
//
LOCUS       XP_040941051             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941051
VERSION     XP_040941051.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085117.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12142
     Region          1..>29
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..106
                     /gene="LOC107894494"
                     /coded_by="XM_041085117.1:488..808"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mqckplskqq vralcdkake ilmeesnvqd wtglnfqevm deaekirvtv htlafyssil
       61 dslavelkas kdfsklyasi ailwlhlsln qpsvvycfff fliffl
//
LOCUS       XP_040941052             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941052
VERSION     XP_040941052.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085118.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12142
     Region          1..>29
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..106
                     /gene="LOC107894494"
                     /coded_by="XM_041085118.1:415..735"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mqckplskqq vralcdkake ilmeesnvqd wtglnfqevm deaekirvtv htlafyssil
       61 dslavelkas kdfsklyasi ailwlhlsln qpsvvycfff fliffl
//
LOCUS       XP_040941053             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941053
VERSION     XP_040941053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085119.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12142
     Region          1..>29
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..106
                     /gene="LOC107894494"
                     /coded_by="XM_041085119.1:508..828"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mqckplskqq vralcdkake ilmeesnvqd wtglnfqevm deaekirvtv htlafyssil
       61 dslavelkas kdfsklyasi ailwlhlsln qpsvvycfff fliffl
//
LOCUS       XP_040941054             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941054
VERSION     XP_040941054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085120.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12142
     Region          1..>29
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..106
                     /gene="LOC107894494"
                     /coded_by="XM_041085120.1:494..814"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mqckplskqq vralcdkake ilmeesnvqd wtglnfqevm deaekirvtv htlafyssil
       61 dslavelkas kdfsklyasi ailwlhlsln qpsvvycfff fliffl
//
LOCUS       XP_040941055             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941055
VERSION     XP_040941055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085121.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12142
     Region          1..>29
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     CDS             1..106
                     /gene="LOC107894494"
                     /coded_by="XM_041085121.1:467..787"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mqckplskqq vralcdkake ilmeesnvqd wtglnfqevm deaekirvtv htlafyssil
       61 dslavelkas kdfsklyasi ailwlhlsln qpsvvycfff fliffl
//
LOCUS       XP_040941056              90 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941056
VERSION     XP_040941056.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085122.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..90
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9920
     CDS             1..90
                     /gene="LOC107894494"
                     /coded_by="XM_041085122.1:1019..1291"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqli skelgvfvre llcvccktfl rftciilfsg
       61 qsimrqgkgn ingrkqcsgl dwfelsrsng
//
LOCUS       XP_040941057              74 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP2A-4 catalytic subunit
            isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941057
VERSION     XP_040941057.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085123.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..74
                     /product="serine/threonine-protein phosphatase PP2A-4
                     catalytic subunit isoform X4"
                     /calculated_mol_wt=8173
     Region          10..>47
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          <26..>71
                     /region_name="Pro_dh"
                     /note="Proline dehydrogenase; pfam01619"
                     /db_xref="CDD:426348"
     CDS             1..74
                     /gene="LOC107894494"
                     /coded_by="XM_041085123.1:1026..1250"
                     /db_xref="GeneID:107894494"
ORIGIN      
        1 mgastdsald ldeqisqlmq ckplskqqvr alcdkakeil meesnvqdwt glnfqevmde
       61 aekirvtyfg fsgg
//
LOCUS       XP_040941058             851 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase ANXUR2 [Gossypium hirsutum].
ACCESSION   XP_040941058
VERSION     XP_040941058.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085124.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..851
                     /product="receptor-like protein kinase ANXUR2"
                     /calculated_mol_wt=94323
     Region          30..397
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          522..787
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(522..526,530,542,544,573,589..592,596,598,640,642,
                     644..645,647,658,661,679..682)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(522..526,530,542,544,573,589..592,596,640,642,
                     644..645,647,658)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(526,596,598,640,642,644,661,679..682)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(657..664,675..682)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..851
                     /gene="LOC121212440"
                     /coded_by="XM_041085124.1:335..2890"
                     /db_xref="GeneID:121212440"
ORIGIN      
        1 mkmmkylanl iagvclifnl ilvssqplfv dcgskggkde ygrtwvedak yltssknseq
       61 agaqhhnpll pstlpymnar ifksqatykf pkkakeryfl rfhfypstfg nydvsksyfa
      121 vaageiplmn nfsaaitcra ltqaylvrey slapsdcdsl eitftpstny sdtfafvngi
      181 elvvmpnllg tapmvgyrsw svldvatenl qtmyrvnvgg qfippnkdag glsrtwyidd
      241 tylngavqgl siqsdktiki dygnmstata pedvystarv mgkfgkvnlq tnltwvfrvd
      301 pnitylvrlh fcelqfdkln nrmfniylnn hsaiadpypa dilawtnqkd vatykdfald
      361 lndesgheqi rvdlnpsaih npryynvlln gleifkvseg rslaspnpel sdmmiqedqv
      421 amnkpktfsk ssdnivvvga tggaaaafvv vallaffytk krkvhrvgph tsswlpvygn
      481 snvggsrsns ahlsalaqgl srhfsiaeik qatnnfdesn vigvggfgkv ykgvinggtk
      541 vaikrsnpss eqginefqte iemlsklrhk hlvsligfce dggemclvyd ymalgtfreh
      601 iynnkksnls wkkrleicig aarglhylht gaqytiihrd vkttnillde kwvakvsdfg
      661 lsktgpdmnq ghvstvvkgs fgyldpeyfr rqqlteksdv ysfgvvlfea lcarpalnps
      721 lpkeqvslad walschkkgt lddiidphlk dkidpeclkk fagtavkcls dqgidrphmg
      781 dvlwnlefal qlqetadssg ssgdqgsvrs rdasvrnpre sgnlsvgseh elneskddsv
      841 ifsqlvnptg r
//
LOCUS       XP_016725185             240 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725185
VERSION     XP_016725185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869696.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..240
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27214
     Region          131..>177
                     /region_name="DUF1685"
                     /note="Protein of unknown function (DUF1685); pfam07939"
                     /db_xref="CDD:462321"
     CDS             1..240
                     /gene="LOC107936908"
                     /coded_by="XM_016869696.2:406..1128"
                     /db_xref="GeneID:107936908"
ORIGIN      
        1 mtrkmvdasf lssssasiye aeteelqhmp lkplmknkky lskqlsmcet srgmdwerrn
       61 rqvvrqergk nteegprlta vpslmrnrry lskqlsmlet srdiawerrr rqilrqergk
      121 ngiaesngng ltdedlhelk gcielgfgfn eeegqqlcnt lpaldlyfav nrqlspspvs
      181 tphsrrsssl sslggrsssf gspksdqewk icspgedpqq vktklrhwaq avacsvmqsy
//
LOCUS       XP_040941059             128 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prefoldin subunit 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941059
VERSION     XP_040941059.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085125.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..128
                     /product="probable prefoldin subunit 4 isoform X1"
                     /calculated_mol_wt=14694
     Region          17..118
                     /region_name="Prefoldin_4"
                     /note="prefoldin subunit 4; cd23165"
                     /db_xref="CDD:467481"
     Site            order(17,19..22,25..26,29,95,98..99,101..102,105..106,
                     108..110,112..114,116..118)
                     /site_type="other"
                     /note="prefoldin/TRiC interface [polypeptide binding]"
                     /db_xref="CDD:467481"
     Region          17..58
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467481"
     Site            order(54..55,59,62,64..73,79,83)
                     /site_type="other"
                     /note="prefoldin oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467481"
     Region          77..118
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467481"
     CDS             1..128
                     /gene="LOC121212441"
                     /coded_by="XM_041085125.1:16..402"
                     /db_xref="GeneID:121212441"
ORIGIN      
        1 milkgtggse tevtwedqqn inkfgrlnnr fhelddeikv akeaidnled asneliltde
       61 evvrfqigev fahvpkeeve trieemkevn sknlekleee kesvlaqmae lkkilygkfk
      121 dsinleed
//
LOCUS       XP_040941060             127 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prefoldin subunit 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941060
VERSION     XP_040941060.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085126.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..127
                     /product="probable prefoldin subunit 4 isoform X2"
                     /calculated_mol_wt=14596
     Region          16..117
                     /region_name="Prefoldin_4"
                     /note="prefoldin subunit 4; cd23165"
                     /db_xref="CDD:467481"
     Site            order(16,18..21,24..25,28,94,97..98,100..101,104..105,
                     107..109,111..113,115..117)
                     /site_type="other"
                     /note="prefoldin/TRiC interface [polypeptide binding]"
                     /db_xref="CDD:467481"
     Region          16..57
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467481"
     Site            order(53..54,58,61,63..72,78,82)
                     /site_type="other"
                     /note="prefoldin oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467481"
     Region          76..117
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467481"
     CDS             1..127
                     /gene="LOC121212441"
                     /coded_by="XM_041085126.1:115..498"
                     /db_xref="GeneID:121212441"
ORIGIN      
        1 mqqgtggset evtwedqqni nkfgrlnnrf helddeikva keaidnleda sneliltdee
       61 vvrfqigevf ahvpkeevet rieemkevns knlekleeek esvlaqmael kkilygkfkd
      121 sinleed
//
LOCUS       XP_040941061             103 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prefoldin subunit 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941061
VERSION     XP_040941061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085127.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..103
                     /product="probable prefoldin subunit 4 isoform X3"
                     /calculated_mol_wt=11863
     Region          <13..93
                     /region_name="Prefoldin"
                     /note="prefoldin; cl09111"
                     /db_xref="CDD:471851"
     Region          52..81
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467481"
     CDS             1..103
                     /gene="LOC121212441"
                     /coded_by="XM_041085127.1:207..518"
                     /db_xref="GeneID:121212441"
ORIGIN      
        1 mnldfnnsln cvikhireai dnledasnel iltdeevvrf qigevfahvp keevetriee
       61 mkevnsknle kleeekesvl aqmaelkkil ygkfkdsinl eed
//
LOCUS       XP_040941062             376 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-mannose 3,5-epimerase 2 [Gossypium hirsutum].
ACCESSION   XP_040941062
VERSION     XP_040941062.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085128.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..376
                     /product="GDP-mannose 3,5-epimerase 2"
                     /calculated_mol_wt=42213
     Region          7..376
                     /region_name="PLN02695"
                     /note="GDP-D-mannose-3',5'-epimerase"
                     /db_xref="CDD:178298"
     Site            order(34,36..39,58..60,77..80,98..102,122,141..143,173,
                     177,200,202..203,216)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187581"
     Site            order(82,112,116..117,120..121,124..125,128,131,150,
                     165..168,172,175,179,182..183,186..187,190..191)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187581"
     Site            order(102..105,108,143..145,173,200..202,215..217,
                     220..221,224,234..235,240,242,276,299..300,305)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187581"
     Site            order(119,143,173,177)
                     /site_type="active"
                     /db_xref="CDD:187581"
     CDS             1..376
                     /gene="LOC121212442"
                     /coded_by="XM_041085128.1:233..1363"
                     /db_xref="GeneID:121212442"
ORIGIN      
        1 mgstdgtsyg aytydalere pywpsqklri sitgaggfia shiarrlkse ghyiiasdwk
       61 knehmtedmf cnefhlvdlr vmenclkvsk gvdhvfnlaa dmggmgfiqs nhsvimynnt
      121 misfnmleaa risgvkrffy assaciypef kqldtnvslk esdawpaepq daygleklat
      181 eelckhytkd fgiecrigrf hniygpfgtw kggrekapaa fcrkaitsid kfemwgdglq
      241 trsftfidec vegvlrltks dfrepvnigs demvsmnema eivlsfedkn lpihhipgpe
      301 gvrgrnsdnt likeklgwap tmrlkdglri tyfwikeqie kekaqgidls vygsskvvgt
      361 qapvqlgslr aadgke
//
LOCUS       XP_040941063             331 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941063
VERSION     XP_040941063.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085129.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..331
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36609
     CDS             1..331
                     /gene="LOC121212443"
                     /coded_by="XM_041085129.1:228..1223"
                     /db_xref="GeneID:121212443"
ORIGIN      
        1 msesgltvld gthlrsfnps lpelngsvsg aqlleiadsk astslfglsl pqnlkasals
       61 rviagpgdha dvtfrqtele kdkaskflsd yisaiadelk ddplvvsild gntlkmfled
      121 eddyamlaen lftdmdiedk gkicknelrn alvhmgvemg ippfsefpll ndilkkhgde
      181 geeelgqaqf aellqpilqe tadalsenhv viihnvkvvn gsklrkllad kkqfdnvver
      241 vlqetksgkd glqkttelir sffeklgknf glppsesnda villydavfs eveneksvvk
      301 adnefreymk dvlkkfaekl ednpiycdld d
//
LOCUS       XP_016733294             349 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: probable aldo-keto reductase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016733294
VERSION     XP_016733294.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877805.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016733294.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..349
                     /product="LOW QUALITY PROTEIN: probable aldo-keto
                     reductase 1"
                     /calculated_mol_wt=38437
     Region          11..313
                     /region_name="AKR_AKR13D1"
                     /note="AKR13D family of aldo-keto reductase (AKR);
                     cd19145"
                     /db_xref="CDD:381371"
     Site            order(30,213..216,219,268,286..290,293,296..297)
                     /site_type="active"
                     /db_xref="CDD:381371"
     Site            order(61,66,92,134)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381371"
     CDS             1..349
                     /gene="LOC107943991"
                     /coded_by="XM_016877805.2:185..1234"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107943991"
ORIGIN      
        1 maqpgcllqi ptvklgtqgl evsklgfgcm gltgiynspl sedeiisiin hafakgitff
       61 dtadvygaht nevlvgkalk qlprekiqla tkfgiagmap tgmivkgspe yvracceasl
      121 krldvdyidl yyqhrvdtsv pieetmgelk klveegkiky iglsesspdt irrahavhpi
      181 tavqmewslw trdiedeivp lcrdlgigiv pyspxgrgff ggravvdsls agtflashpr
      241 fqgdnlkknk nfyiriedqa kkrqctpaql alawvlqqgd dvvpipgttk iknldqnids
      301 lrvkltsddl keirdavpie evagdrnyds mkkaswkfad tckrcwgfn
//
LOCUS       XP_040941064             210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941064
VERSION     XP_040941064.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085130.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..210
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=22996
     CDS             1..210
                     /gene="LOC107899355"
                     /coded_by="XM_041085130.1:273..905"
                     /db_xref="GeneID:107899355"
ORIGIN      
        1 masyqilafa alflillpva vngdlgdlsp alspfydrlc ddvdcgkgtc kadisyplny
       61 icecdagwkr tqddsddddd hkflpcvipn ctldyscqpa pppvpqrevp rnsslfdpcy
      121 waycgegtcn ktatykyvce crsgfsnlln rtyfpcysqc tlgsdcsrlg itvesqevtp
      181 dggvgkantf lpgklhwvai gmmsmaivlw
//
LOCUS       XP_040941065             199 aa            linear   PLN 06-AUG-2024
DEFINITION  slit homolog 2 protein isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941065
VERSION     XP_040941065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085131.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..199
                     /product="slit homolog 2 protein isoform X2"
                     /calculated_mol_wt=21848
     CDS             1..199
                     /gene="LOC107899355"
                     /coded_by="XM_041085131.1:114..713"
                     /db_xref="GeneID:107899355"
ORIGIN      
        1 masyqilafa alflillpva vngdldrlcd dvdcgkgtck adisyplnyi cecdagwkrt
       61 qddsdddddh kflpcvipnc tldyscqpap ppvpqrevpr nsslfdpcyw aycgegtcnk
      121 tatykyvcec rsgfsnllnr tyfpcysqct lgsdcsrlgi tvesqevtpd ggvgkantfl
      181 pgklhwvaig mmsmaivlw
//
LOCUS       XP_016674116             693 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674116
VERSION     XP_016674116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..693
                     /product="protein tesmin/TSO1-like CXC 3 isoform X1"
                     /calculated_mol_wt=76275
     Region          409..446
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          495..530
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..693
                     /gene="LOC107893594"
                     /coded_by="XM_016818627.2:127..2208"
                     /db_xref="GeneID:107893594"
ORIGIN      
        1 mdtpdktqit ptsnlskfed spvfkyidsl spielaksrq tdngfsslaf lspsslfpsp
       61 qitchresrf svkrhhflep lnsrvarsgh esntsegask vdehlgclnn dsssketssd
      121 qldkqpnlat dlprtlkydc rspdgdfepc neilkktnve vagqerspfq cnrdkweerq
      181 qsfqnerdlr kicgikqsee sagpdwvavl sdvadmltmn ssiihantdg rdwrttnsgt
      241 tsfisnilqf pldkannsen aefgdpsgsc kqsesgepvm drmhgilstc lpdelvvnds
      301 glkkddkegn cnesnhqqfs irrrclvfek spgfglhlns lpnipkgqsp lskstlsstn
      361 rgevpddnkg vvtensyemp atfggneadh nspekkrqkf eiveesvack rcnckrskcl
      421 klycdcfaag lyciepcscq dcfnkpihen vvletrrqie srnplafapk virttngvsd
      481 smgeinktpa sarhkrgcnc krssclkkyc ecfqagvgcs lscrcegckn sfgrkeggce
      541 sesdgdnlea ceknasekss hdtvisngqe hldlsvpspd isrlpfaysg klaaffphsi
      601 ksspqlcgtq eqgsshtssc kpklesnldg ipesgtpeip khkcftlvsn ptspnckgvf
      661 stpnhdstss stkwrsrkli lrsvpsfpsf spp
//
LOCUS       XP_016674117             692 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674117
VERSION     XP_016674117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..692
                     /product="protein tesmin/TSO1-like CXC 3 isoform X2"
                     /calculated_mol_wt=76147
     Region          408..445
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          494..529
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..692
                     /gene="LOC107893594"
                     /coded_by="XM_016818628.2:157..2235"
                     /db_xref="GeneID:107893594"
ORIGIN      
        1 mdtpdktqit ptsnlskfed spvfkyidsl spielaksrq tdngfsslaf lspsslfpsp
       61 qitchresrf svkrhhflep lnsrvarsgh esntsegask vdehlgclnn dsssketssd
      121 qldkqpnlat dlprtlkydc rspdgdfepc neilkktnve vagqerspfq cnrdkweerq
      181 qsfqnerdlr kicgikqsee sagpdwvavl sdvadmltmn ssiihantdg rdwrttnsgt
      241 tsfisnilqf pldkannsen aefgdpsgsc kqsesgepvm drmhgilstc lpdelvvnds
      301 glkkddkegn cnesnhqfsi rrrclvfeks pgfglhlnsl pnipkgqspl skstlsstnr
      361 gevpddnkgv vtensyempa tfggneadhn spekkrqkfe iveesvackr cnckrskclk
      421 lycdcfaagl yciepcscqd cfnkpihenv vletrrqies rnplafapkv irttngvsds
      481 mgeinktpas arhkrgcnck rssclkkyce cfqagvgcsl scrcegckns fgrkeggces
      541 esdgdnleac eknasekssh dtvisngqeh ldlsvpspdi srlpfaysgk laaffphsik
      601 sspqlcgtqe qgsshtssck pklesnldgi pesgtpeipk hkcftlvsnp tspnckgvfs
      661 tpnhdstsss tkwrsrklil rsvpsfpsfs pp
//
LOCUS       XP_040941067             654 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941067
VERSION     XP_040941067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085133.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..654
                     /product="protein tesmin/TSO1-like CXC 3 isoform X3"
                     /calculated_mol_wt=72304
     Region          409..446
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          495..530
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..654
                     /gene="LOC107893594"
                     /coded_by="XM_041085133.1:127..2091"
                     /db_xref="GeneID:107893594"
ORIGIN      
        1 mdtpdktqit ptsnlskfed spvfkyidsl spielaksrq tdngfsslaf lspsslfpsp
       61 qitchresrf svkrhhflep lnsrvarsgh esntsegask vdehlgclnn dsssketssd
      121 qldkqpnlat dlprtlkydc rspdgdfepc neilkktnve vagqerspfq cnrdkweerq
      181 qsfqnerdlr kicgikqsee sagpdwvavl sdvadmltmn ssiihantdg rdwrttnsgt
      241 tsfisnilqf pldkannsen aefgdpsgsc kqsesgepvm drmhgilstc lpdelvvnds
      301 glkkddkegn cnesnhqqfs irrrclvfek spgfglhlns lpnipkgqsp lskstlsstn
      361 rgevpddnkg vvtensyemp atfggneadh nspekkrqkf eiveesvack rcnckrskcl
      421 klycdcfaag lyciepcscq dcfnkpihen vvletrrqie srnplafapk virttngvsd
      481 smgeinktpa sarhkrgcnc krssclkkyc ecfqagvgcs lscrcegckn sfgrkeggce
      541 sesdgdnlea ceknasekss hdtvisngqe hldlsvpspd isrdlncgcg rvfgrvafva
      601 vaditdaiav tvgiaiviff kfaqlivkhs nynynyknsl lmilecflal inly
//
LOCUS       XP_040941068             653 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 3 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941068
VERSION     XP_040941068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085134.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..653
                     /product="protein tesmin/TSO1-like CXC 3 isoform X4"
                     /calculated_mol_wt=72176
     Region          408..445
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          494..529
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..653
                     /gene="LOC107893594"
                     /coded_by="XM_041085134.1:180..2141"
                     /db_xref="GeneID:107893594"
ORIGIN      
        1 mdtpdktqit ptsnlskfed spvfkyidsl spielaksrq tdngfsslaf lspsslfpsp
       61 qitchresrf svkrhhflep lnsrvarsgh esntsegask vdehlgclnn dsssketssd
      121 qldkqpnlat dlprtlkydc rspdgdfepc neilkktnve vagqerspfq cnrdkweerq
      181 qsfqnerdlr kicgikqsee sagpdwvavl sdvadmltmn ssiihantdg rdwrttnsgt
      241 tsfisnilqf pldkannsen aefgdpsgsc kqsesgepvm drmhgilstc lpdelvvnds
      301 glkkddkegn cnesnhqfsi rrrclvfeks pgfglhlnsl pnipkgqspl skstlsstnr
      361 gevpddnkgv vtensyempa tfggneadhn spekkrqkfe iveesvackr cnckrskclk
      421 lycdcfaagl yciepcscqd cfnkpihenv vletrrqies rnplafapkv irttngvsds
      481 mgeinktpas arhkrgcnck rssclkkyce cfqagvgcsl scrcegckns fgrkeggces
      541 esdgdnleac eknasekssh dtvisngqeh ldlsvpspdi srdlncgcgr vfgrvafvav
      601 aditdaiavt vgiaiviffk faqlivkhsn ynynyknsll milecflali nly
//
LOCUS       XP_040941069             629 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 3 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941069
VERSION     XP_040941069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085135.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..629
                     /product="protein tesmin/TSO1-like CXC 3 isoform X5"
                     /calculated_mol_wt=69757
     Region          409..446
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          495..530
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..629
                     /gene="LOC107893594"
                     /coded_by="XM_041085135.1:127..2016"
                     /db_xref="GeneID:107893594"
ORIGIN      
        1 mdtpdktqit ptsnlskfed spvfkyidsl spielaksrq tdngfsslaf lspsslfpsp
       61 qitchresrf svkrhhflep lnsrvarsgh esntsegask vdehlgclnn dsssketssd
      121 qldkqpnlat dlprtlkydc rspdgdfepc neilkktnve vagqerspfq cnrdkweerq
      181 qsfqnerdlr kicgikqsee sagpdwvavl sdvadmltmn ssiihantdg rdwrttnsgt
      241 tsfisnilqf pldkannsen aefgdpsgsc kqsesgepvm drmhgilstc lpdelvvnds
      301 glkkddkegn cnesnhqqfs irrrclvfek spgfglhlns lpnipkgqsp lskstlsstn
      361 rgevpddnkg vvtensyemp atfggneadh nspekkrqkf eiveesvack rcnckrskcl
      421 klycdcfaag lyciepcscq dcfnkpihen vvletrrqie srnplafapk virttngvsd
      481 smgeinktpa sarhkrgcnc krssclkkyc ecfqagvgcs lscrcegckn sfgrkeggce
      541 sesdgdnlea ceknasekss hdtvisngqe hldlsvpspd isrwgnifpf vfhcfcrflf
      601 egmtfflkft vtenngnsgp llpqlavtr
//
LOCUS       XP_040941070             628 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 3 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040941070
VERSION     XP_040941070.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085136.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..628
                     /product="protein tesmin/TSO1-like CXC 3 isoform X6"
                     /calculated_mol_wt=69629
     Region          408..445
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          494..529
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..628
                     /gene="LOC107893594"
                     /coded_by="XM_041085136.1:127..2013"
                     /db_xref="GeneID:107893594"
ORIGIN      
        1 mdtpdktqit ptsnlskfed spvfkyidsl spielaksrq tdngfsslaf lspsslfpsp
       61 qitchresrf svkrhhflep lnsrvarsgh esntsegask vdehlgclnn dsssketssd
      121 qldkqpnlat dlprtlkydc rspdgdfepc neilkktnve vagqerspfq cnrdkweerq
      181 qsfqnerdlr kicgikqsee sagpdwvavl sdvadmltmn ssiihantdg rdwrttnsgt
      241 tsfisnilqf pldkannsen aefgdpsgsc kqsesgepvm drmhgilstc lpdelvvnds
      301 glkkddkegn cnesnhqfsi rrrclvfeks pgfglhlnsl pnipkgqspl skstlsstnr
      361 gevpddnkgv vtensyempa tfggneadhn spekkrqkfe iveesvackr cnckrskclk
      421 lycdcfaagl yciepcscqd cfnkpihenv vletrrqies rnplafapkv irttngvsds
      481 mgeinktpas arhkrgcnck rssclkkyce cfqagvgcsl scrcegckns fgrkeggces
      541 esdgdnleac eknasekssh dtvisngqeh ldlsvpspdi srwgnifpfv fhcfcrflfe
      601 gmtfflkftv tenngnsgpl lpqlavtr
//
LOCUS       XP_016722144             134 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S24-1 [Gossypium hirsutum].
ACCESSION   XP_016722144
VERSION     XP_016722144.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866655.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="40S ribosomal protein S24-1"
                     /calculated_mol_wt=15447
     Region          5..132
                     /region_name="PTZ00071"
                     /note="40S ribosomal protein S24; Provisional"
                     /db_xref="CDD:240256"
     CDS             1..134
                     /gene="LOC107934276"
                     /coded_by="XM_016866655.2:199..603"
                     /db_xref="GeneID:107934276"
ORIGIN      
        1 madkavtirt rkfmtnrlls rkqfiidvlh pgrpnvskae lkenlsrmye vkdpnsifvf
       61 kfrthfgggk stgfgliyds venakkyepk yrlirngldt kveksrkqmk erknrakkir
      121 gvkktkasea akkk
//
LOCUS       XP_016675764              97 aa            linear   PLN 06-AUG-2024
DEFINITION  succinate dehydrogenase assembly factor 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016675764
VERSION     XP_016675764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..97
                     /product="succinate dehydrogenase assembly factor 1,
                     mitochondrial"
                     /calculated_mol_wt=10925
     Region          10..74
                     /region_name="Complex1_LYR_SDHAF1_LYRM8"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     mitochondrial succinate dehydrogenase assembly factor 1
                     (SDHAF1) and similar proteins; cd20268"
                     /db_xref="CDD:380763"
     CDS             1..97
                     /gene="LOC107895066"
                     /coded_by="XM_016820275.2:346..639"
                     /db_xref="GeneID:107895066"
ORIGIN      
        1 mgaskgqkls gmqrqvlsly rgflraarsk ptedrrqies ivsaefrrns kqvdrknflh
       61 ieyllrrgkk qldqlkspdt iglsscnvss skknaet
//
LOCUS       XP_016675765              97 aa            linear   PLN 06-AUG-2024
DEFINITION  succinate dehydrogenase assembly factor 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016675765
VERSION     XP_016675765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820276.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..97
                     /product="succinate dehydrogenase assembly factor 1,
                     mitochondrial"
                     /calculated_mol_wt=10925
     Region          10..74
                     /region_name="Complex1_LYR_SDHAF1_LYRM8"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     mitochondrial succinate dehydrogenase assembly factor 1
                     (SDHAF1) and similar proteins; cd20268"
                     /db_xref="CDD:380763"
     CDS             1..97
                     /gene="LOC107895066"
                     /coded_by="XM_016820276.2:264..557"
                     /db_xref="GeneID:107895066"
ORIGIN      
        1 mgaskgqkls gmqrqvlsly rgflraarsk ptedrrqies ivsaefrrns kqvdrknflh
       61 ieyllrrgkk qldqlkspdt iglsscnvss skknaet
//
LOCUS       XP_040941072              97 aa            linear   PLN 06-AUG-2024
DEFINITION  succinate dehydrogenase assembly factor 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040941072
VERSION     XP_040941072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085138.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..97
                     /product="succinate dehydrogenase assembly factor 1,
                     mitochondrial"
                     /calculated_mol_wt=10925
     Region          10..74
                     /region_name="Complex1_LYR_SDHAF1_LYRM8"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     mitochondrial succinate dehydrogenase assembly factor 1
                     (SDHAF1) and similar proteins; cd20268"
                     /db_xref="CDD:380763"
     CDS             1..97
                     /gene="LOC107895066"
                     /coded_by="XM_041085138.1:740..1033"
                     /db_xref="GeneID:107895066"
ORIGIN      
        1 mgaskgqkls gmqrqvlsly rgflraarsk ptedrrqies ivsaefrrns kqvdrknflh
       61 ieyllrrgkk qldqlkspdt iglsscnvss skknaet
//
LOCUS       XP_040941073             147 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941073
VERSION     XP_040941073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085139.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..147
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16534
     Region          <4..61
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     CDS             1..147
                     /gene="LOC121212446"
                     /coded_by="XM_041085139.1:493..936"
                     /db_xref="GeneID:121212446"
ORIGIN      
        1 miseateime klkdkkaeye atastdnsvn fedidnkiin evlgperygr vrfqgsgvnp
       61 tqyfgstshq yipsgsqsqa kvqrlkdqiv qiqastdeqi sqlraeaaar eaeaaareve
      121 qkrkynelql qlqsmmtmfq qfqnpps
//
LOCUS       XP_016674077             400 aa            linear   PLN 06-AUG-2024
DEFINITION  monooxygenase 1 [Gossypium hirsutum].
ACCESSION   XP_016674077
VERSION     XP_016674077.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818588.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674077.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..400
                     /product="monooxygenase 1"
                     /calculated_mol_wt=43726
     Region          6..382
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     CDS             1..400
                     /gene="LOC107893557"
                     /coded_by="XM_016818588.2:142..1344"
                     /db_xref="GeneID:107893557"
ORIGIN      
        1 mniseqeqdi vivgggisgl atalalrrkg iksmvlerse tlraagvgii mqpngwrald
       61 qlgvaaklrq tcteipsgvf isvaegkcre selplgkgel rclkrmelmk alaeelpves
      121 vylgcravsi lldpltsnpl lqlhdgtlik akivigcdgv nsiiskfvgv nspklfsrca
      181 trgftyyegg hsfgdkfrfy ssndvtlgql pvtdklvywf ltrvltsqdl sdakkdpayi
      241 tkasleaikg fpeeivelvk ntepntlylt elryrapwdl vrtkfrkgtv vvagdamham
      301 cpfisqggga slgdavvlar clseklkqaa egggkrlvee aldeyvrerr mrvfwlslqt
      361 yfiglvqdnt skvkkalgia glilvfgdqt shtdydcghl
//
LOCUS       XP_040941075             836 aa            linear   PLN 06-AUG-2024
DEFINITION  nucleolar complex protein 3 homolog [Gossypium hirsutum].
ACCESSION   XP_040941075
VERSION     XP_040941075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085141.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..836
                     /product="nucleolar complex protein 3 homolog"
                     /calculated_mol_wt=93724
     Region          161..713
                     /region_name="NOC3"
                     /note="Protein involved in the nuclear export of
                     pre-ribosomes [Translation, ribosomal structure and
                     biogenesis / Intracellular trafficking and secretion];
                     COG5117"
                     /db_xref="CDD:227447"
     CDS             1..836
                     /gene="LOC121212447"
                     /coded_by="XM_041085141.1:165..2675"
                     /db_xref="GeneID:121212447"
ORIGIN      
        1 mgkgkgkqrk qiilppelpp eiadddievs dedlkfvden kdyagfvsrl dthsinkqvt
       61 rvegvnedal ealyekrrrk tlehkeneks vvqvdpvdal pvksldgevy yrtfsqtaev
      121 tenegdidks vvkltkaerr aklkktkkea kkmgkelakt eevqptqqea alaevkedlt
      181 aeeafeakkr klaelgmall adpeaniksl kemlqfakdg dhsilklgll sllavfkdii
      241 pgyrirlpte kelemkvske vkkmrfyest llsaykgylq kllalekqpr fhhvvvrcic
      301 tlldavphfn fresllvavv rnigssddvv rricystiks lftsegkhgg eatveavrli
      361 adhvkvhdcq lhpdsvevlm slsfdddlgk pevqegnnkm kknkkrknfe esnqpqgndr
      421 trskqetiak mkeevatdyk avsytpdvee rkrmqsetls avfetyfril rhtmqssvas
      481 seangniisd gsgahpllap clsglgkfsh lidmdyigdl mnylkrlaar gsssdssaqk
      541 vqnltlserl hccivafkvm rsnldalnvd lqdffvqlyn lvleyrpgrd egevlaeahk
      601 imlcddrqhd mqkaaafikr latfalcfgs aesmaalvtl kqllqrnvkc rnllendagg
      661 gsvsgsiaky qpygsdpsls galasvlwel nllskhyhpa istlasgiss mnsaqnqvyi
      721 sispqqafkn llleaesfky nqqgctqksn krkgrstala stlasveppp ieenevskkl
      781 rrhfillrdi kenerlrgel drtasalqly eeykkqrkpa tltnkkskka kttvgm
//
LOCUS       XP_040941076             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941076
VERSION     XP_040941076.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085142.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12810
     CDS             1..107
                     /gene="LOC107962085"
                     /coded_by="XM_041085142.1:18..341"
                     /db_xref="GeneID:107962085"
ORIGIN      
        1 mpsqkilkpi lssgyhfffs fdgsvywesc sfknwfiffs ytfllvlffp ipfsiwfmsp
       61 fnpllsfsip rdthyqlqrr klphdgsqsk kiaqrpqqkr wfwlgvn
//
LOCUS       XP_016755458             137 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HIGH ARSENIC CONTENT 1, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016755458
VERSION     XP_016755458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016899969.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..137
                     /product="protein HIGH ARSENIC CONTENT 1, mitochondrial"
                     /calculated_mol_wt=14871
     Region          6..117
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            84
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     CDS             1..137
                     /gene="LOC107963456"
                     /coded_by="XM_016899969.2:159..572"
                     /db_xref="GeneID:107963456"
ORIGIN      
        1 mdapksctpe evatvnvisa kdllgsnycy ldvrtpeefs kshidhafnv pymfitqegk
       61 vknpeflkev slilkkddhi ivgcnsggrg vracvdliea gyenvsnmeg gysawvdagl
      121 tsagdkpaee lkskfrp
//
LOCUS       XP_016753809             250 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016753809
VERSION     XP_016753809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016898320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..250
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26874
     CDS             1..250
                     /gene="LOC107962086"
                     /coded_by="XM_016898320.2:127..879"
                     /db_xref="GeneID:107962086"
ORIGIN      
        1 maadvsslhr vlsgykddlt vgnesggpks talitrdllg vgvggsaftd akhdqsqeld
       61 ldlhvpngwe krldlksgrv ylqrcnstns ssssdgtkhq tnptvaklqd lniptsplpc
      121 kpslnlfdes nlelklvpss snyqsvctld kvksalerae kepikkrtsp sslwksslsp
      181 syssssssik dsqksefsie kfaspiaagc pgclsyvlim khnpkcprcn tlvpimpaak
      241 kpridlnisi
//
LOCUS       XP_040941078            1232 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040941078
VERSION     XP_040941078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085144.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1232
                     /product="pre-mRNA-splicing factor ATP-dependent RNA
                     helicase DEAH7 isoform X1"
                     /calculated_mol_wt=139050
     Region          80..>203
                     /region_name="RSRP"
                     /note="Arginine/Serine-Rich protein 1; pfam17069"
                     /db_xref="CDD:293674"
     Region          534..>1153
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..1232
                     /gene="LOC121202928"
                     /coded_by="XM_041085144.1:336..4034"
                     /db_xref="GeneID:121202928"
ORIGIN      
        1 msldvgarek qgnpkvddgf kvpkekitci aasvdvdegf essgveetrs tvtngsrsht
       61 nrryrdktas ettnsesgvt ldsggsddtf gtprsrehrs sdvpaspsqs srtvssrslr
      121 yeredhgmer rgssddsrne hriarkrhyy ddrrdthgry gedyrrsrnr yesrtpgrsd
      181 wddgrwewqd tpnwdsysgs srrhqpspap mflgaspdar lvspwmgdrt prstvsaspw
      241 dhaspspvai rasgasvkss ssrygrtshq lsfsressqs fedeadrnsl aeehnyeite
      301 smrlemeyns drawydreeg ntmfdadsss lflgdeasfq kkeaelakrl vrrdgtkmsl
      361 aqskklsqlt adnaqwedrq llrsgavrgt evqtefdded erkvillvhd tkppfldgri
      421 vftkqaepvm pikdptsdma iisrkgsnlv reihekqsmn ksrqrfwela gsklgdilgv
      481 ektaeqidad taevgehgei dfkedakfaq hlkkgeavse famsksmaeq rqylpiysvr
      541 dellqviren qvvvvvgetg sgkttqltqy lhedgyting vvgctqprrv aamsvakrvs
      601 eemetelgdk vgyairfedv tgpntiikym tdgvllretl kdadldkyrv ivmdeahers
      661 lntdvlfgil kkvvaqrrdf klivtsatln aqkfsnffgs vpifhipgrt fpvnilyskt
      721 pcedyveaav kqamtihits spgdilifmt gqdeieaacy alaerieqli sstrkgvpkl
      781 lilpiysqlp adlqakifqk aedgarkciv atniaetslt vdgifyvidt gygkmkvynp
      841 kmgmdalqvf pvsraaadqr agragrtgpg tcyrlytesa ylnemlpapv peiqrtnlgn
      901 vvlllkslki enlldfdfmd pppqenilns myqlwvlgal nnvggltdig wkmvefpldp
      961 plakmllmge qlecldevlt ivsmlsvpsv ffrpkdraee sdaarenffv pesdhltlln
     1021 vyqqwkanqy rgdwcndhfl hvkglrkare vrsqlldilk tlkipltscg fdwdivrkai
     1081 csayfhnaar lkgvgeyvnc rngmpchlhp ssalfglgyt peyvvyheli lttkeymqcv
     1141 tavepqwlae lgpmffsvke sdttllehkk kqkeektame eemenlrkmq aeaekeskek
     1201 erqkrakqqq qvsmpglrkg sstylrpkkf gl
//
LOCUS       XP_040941079            1105 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040941079
VERSION     XP_040941079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085145.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1105
                     /product="pre-mRNA-splicing factor ATP-dependent RNA
                     helicase DEAH7 isoform X2"
                     /calculated_mol_wt=125284
     Region          2..>118
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          407..>1026
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..1105
                     /gene="LOC121202928"
                     /coded_by="XM_041085145.1:123..3440"
                     /db_xref="GeneID:121202928"
ORIGIN      
        1 merrgssdds rnehriarkr hyyddrrdth grygedyrrs rnryesrtpg rsdwddgrwe
       61 wqdtpnwdsy sgssrrhqps papmflgasp darlvspwmg drtprstvsa spwdhaspsp
      121 vairasgasv kssssrygrt shqlsfsres sqsfedeadr nslaeehnye itesmrleme
      181 ynsdrawydr eegntmfdad ssslflgdea sfqkkeaela krlvrrdgtk mslaqskkls
      241 qltadnaqwe drqllrsgav rgtevqtefd dederkvill vhdtkppfld grivftkqae
      301 pvmpikdpts dmaiisrkgs nlvreihekq smnksrqrfw elagsklgdi lgvektaeqi
      361 dadtaevgeh geidfkedak faqhlkkgea vsefamsksm aeqrqylpiy svrdellqvi
      421 renqvvvvvg etgsgkttql tqylhedgyt ingvvgctqp rrvaamsvak rvseemetel
      481 gdkvgyairf edvtgpntii kymtdgvllr etlkdadldk yrvivmdeah erslntdvlf
      541 gilkkvvaqr rdfklivtsa tlnaqkfsnf fgsvpifhip grtfpvnily sktpcedyve
      601 aavkqamtih itsspgdili fmtgqdeiea acyalaerie qlisstrkgv pkllilpiys
      661 qlpadlqaki fqkaedgark civatniaet sltvdgifyv idtgygkmkv ynpkmgmdal
      721 qvfpvsraaa dqragragrt gpgtcyrlyt esaylnemlp apvpeiqrtn lgnvvlllks
      781 lkienlldfd fmdpppqeni lnsmyqlwvl galnnvgglt digwkmvefp ldpplakmll
      841 mgeqleclde vltivsmlsv psvffrpkdr aeesdaaren ffvpesdhlt llnvyqqwka
      901 nqyrgdwcnd hflhvkglrk arevrsqlld ilktlkiplt scgfdwdivr kaicsayfhn
      961 aarlkgvgey vncrngmpch lhpssalfgl gytpeyvvyh elilttkeym qcvtavepqw
     1021 laelgpmffs vkesdttlle hkkkqkeekt ameeemenlr kmqaeaekes kekerqkrak
     1081 qqqqvsmpgl rkgsstylrp kkfgl
//
LOCUS       XP_016755459             508 aa            linear   PLN 06-AUG-2024
DEFINITION  desmethyl-deoxy-podophyllotoxin synthase [Gossypium hirsutum].
ACCESSION   XP_016755459
VERSION     XP_016755459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016899970.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..508
                     /product="desmethyl-deoxy-podophyllotoxin synthase"
                     /calculated_mol_wt=57514
     Region          68..494
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(105,129,133,141,186,302,305..306,309..310,369,
                     373..374,376,436..439,442..446,449..450)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(208,212,237,301,304..305,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..508
                     /gene="LOC107963457"
                     /coded_by="XM_016899970.2:37..1563"
                     /db_xref="GeneID:107963457"
ORIGIN      
        1 menqlpsflf lfaslififm vlrtrqnsky nqlasklppg plklpligsl hlfigtqphh
       61 clarlahkyg slmllqlgev ptviissaec akevmkthds ifserpylya aetitynfqd
      121 ivfahgdyrk qirkicvlel lsqkrvqsfr pireeeisnl vkaikskagv ainlknllys
      181 lslnilsraa fggrfkqqda fkkllpdive lfgglsivdv ypslkllrli lgmrpkhkrl
      241 hreadeilen viqqhraakl rtdmeqenei ddlvqvlldi qdrggdeipl atsgikatlm
      301 dlflaggett ssivewamse llrnphvmqk aqaevrqvfs grkdvnesgi velkylnpvi
      361 ketlrlhppa plllprecqe rcemmgceip aksrvivnaw aigrnhnywn eadkfdperf
      421 lessisykgt dfelipfgag kricpgmsfg lanvelilan llyhfdwklp nginpqdldm
      481 aevfgaslrr khdlclvpip yqfgesee
//
LOCUS       XP_040941080             538 aa            linear   PLN 06-AUG-2024
DEFINITION  probable terpene synthase 9 [Gossypium hirsutum].
ACCESSION   XP_040941080
VERSION     XP_040941080.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085146.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..538
                     /product="probable terpene synthase 9"
                     /calculated_mol_wt=62366
     Region          4..536
                     /region_name="Terpene_cyclase_plant_C1"
                     /note="Plant Terpene Cyclases, Class 1; cd00684"
                     /db_xref="CDD:173832"
     Site            order(4..11,445..446,448..451,453..456,516..519)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     Site            order(251,260,281,283..285,288,292,363,435..436,438..439,
                     442,446,513,517,519)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173832"
     Site            order(288,292,438,442,446)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     Site            288..292
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173832"
     Site            438..446
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173832"
     CDS             1..538
                     /gene="LOC107963127"
                     /coded_by="XM_041085146.1:2..1618"
                     /db_xref="GeneID:107963127"
ORIGIN      
        1 mserrsggyl ptvwdpeliq sftplctyes dghrleelkh atqllfkspt rpeekldmin
       61 kmqrldvakh fkkeikeflt hldpntptdl ftvalqfrll rhygfsvgsd vfnkfmnsdg
      121 kfkeclseda agllslyeas hlgvheedvl deakafstkq lklaldklel ekdlaqqike
      181 slevplhwrl prmearnfin iyqrdenkkl allelakldf nllqsvylqe lkelaewwkg
      241 lkmkdklpfa rdrmvesyfw amgsvpdpkf skcrrnmtky aslvtmlddv ydiygskdel
      301 hkyttavkrw dleaivelpe ymkvcykgmy nhvnemleda lntlgldilp yikdqwmcyv
      361 qslhveaewy ygeympttld eylknawisi gipvglayif lamledsnsl nqcelqlfeq
      421 wsssdlfylp slitrllddl stsevemerg eainsiqcym iqegvseeea rdhikdlisd
      481 lwkklnksva hsslptgfae aalamvrcvh gmyqfgdwfg iqskankdcq nsllfngv
//
LOCUS       XP_016675845             760 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphate transporter PHO1 homolog 7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675845
VERSION     XP_016675845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..760
                     /product="phosphate transporter PHO1 homolog 7 isoform X1"
                     /calculated_mol_wt=88129
     Region          1..310
                     /region_name="SPX"
                     /note="SPX domain; pfam03105"
                     /db_xref="CDD:460807"
     Region          399..734
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..760
                     /gene="LOC107895125"
                     /coded_by="XM_016820356.2:200..2482"
                     /db_xref="GeneID:107895125"
ORIGIN      
        1 mkfgkefasq mvpewqaayv dysslkkflk eihgvkqkyr qpdtptrlqr altlyrsfsg
       61 ldprrnkggs sfddhdvenq ailvnsvrgn gsgkyettfl mvaeegaeye qeffkkldne
      121 lnkvdkfyrs kvkevmaeae tltnqmhali afrikvdklq enfdvsgsnd kimvpmnalq
      181 gttesdndak qssngcleiq eenpkkvvss irlapqevln hvklnqaiqa pfsaakvyca
      241 sntnktqmnf skdnlkkiqn qlkqafiefy yklrllknys flnvlafski mkkydkitsr
      301 raskyymrtv ddsyignsde vtklmervea tfikhfsnsn rskgmnqlrp kskkerhsts
      361 fgtgffagct aalilalvli iharnildke grvqymesmf pvyslfgfmv lhmlmhagni
      421 yfwrryrvny sfifgfkqgt elgfrealfl sfglatlali svvsnldmem dpktgdykal
      481 tellplslll lviivllcpf nilyrssrff llrtsfrcic aplykvkfqd fyladqftse
      541 vqafrsveyy ichygwgdfk lrqntcksnd ifntfyfiva vvpywsrllq cvrrfhdekd
      601 pmqgynglky fltivalctr taygldrgts wkavawtfsa maalygtywd lvvdwgllqr
      661 rsknrwlrdk llipyksvyf gamvlnvllr fawlqtvldl slslhretli aivasleiir
      721 rgiwnffrle nehlnnvgkf rafksvplpf yndededrid
//
LOCUS       XP_016675846             685 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphate transporter PHO1 homolog 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016675846
VERSION     XP_016675846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..685
                     /product="phosphate transporter PHO1 homolog 3 isoform X2"
                     /calculated_mol_wt=79263
     Region          1..310
                     /region_name="SPX"
                     /note="SPX domain; pfam03105"
                     /db_xref="CDD:460807"
     Region          399..684
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..685
                     /gene="LOC107895125"
                     /coded_by="XM_016820357.2:203..2260"
                     /db_xref="GeneID:107895125"
ORIGIN      
        1 mkfgkefasq mvpewqaayv dysslkkflk eihgvkqkyr qpdtptrlqr altlyrsfsg
       61 ldprrnkggs sfddhdvenq ailvnsvrgn gsgkyettfl mvaeegaeye qeffkkldne
      121 lnkvdkfyrs kvkevmaeae tltnqmhali afrikvdklq enfdvsgsnd kimvpmnalq
      181 gttesdndak qssngcleiq eenpkkvvss irlapqevln hvklnqaiqa pfsaakvyca
      241 sntnktqmnf skdnlkkiqn qlkqafiefy yklrllknys flnvlafski mkkydkitsr
      301 raskyymrtv ddsyignsde vtklmervea tfikhfsnsn rskgmnqlrp kskkerhsts
      361 fgtgffagct aalilalvli iharnildke grvqymesmf pvyslfgfmv lhmlmhagni
      421 yfwrryrvny sfifgfkqgt elgfrealfl sfglatlali svvsnldmem dpktgdykal
      481 tellplslll lviivllcpf nilyrssrff llrtsfrcic aplykvkfqd fyladqftse
      541 vqafrsveyy ichygwgdfk lrqntcksnd ifntfyfiva vvpywsrllq cvrrfhdekd
      601 pmqgynglky fltivalctr taygldrgts wkavawtfsa maalygtywd lvvdwgllqr
      661 rsknrwlrdk llipyksvyf gamvk
//
LOCUS       XP_016675847             430 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase CDR1 [Gossypium hirsutum].
ACCESSION   XP_016675847
VERSION     XP_016675847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..430
                     /product="aspartic proteinase CDR1"
                     /calculated_mol_wt=46436
     Region          8..430
                     /region_name="PLN03146"
                     /note="aspartyl protease family protein; Provisional"
                     /db_xref="CDD:178691"
     CDS             1..430
                     /gene="LOC107895126"
                     /coded_by="XM_016820358.2:159..1451"
                     /db_xref="GeneID:107895126"
ORIGIN      
        1 mmhkplflvl taifsslvvq pvigakgfsv elihrdspis pfydpsltss qilrknalhs
       61 mdrlkhfqsl idqstiqsav tpnggiylin lsfgtppvey mavadtgsdl iwiqcvpcpq
      121 sqcypqgspp fdpqasstyk kipcgsdscq alpryqcsnd vndcqylyry gdksftrgil
      181 stdtitfdds ngqktafpts ifgcghnnlg kfrspsaglv glgggplslv sqistqidhr
      241 fsyclvplsa sssskllfgq eaiisrpgav stplvskapq tyyylslegv sigdktaqag
      301 ssqgniiids gttltyless fyssletivk daigadpvqs psesfslcyg setninvpem
      361 vfhfsgadlr lqpvntfanf ddnlvcmlia ptpsdlplsi fgnfaqinlq veydlekrtv
      421 sfvptdctnq
//
LOCUS       XP_016675848             425 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase CDR1 [Gossypium hirsutum].
ACCESSION   XP_016675848
VERSION     XP_016675848.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675848.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..425
                     /product="aspartic proteinase CDR1"
                     /calculated_mol_wt=45927
     Region          7..425
                     /region_name="PLN03146"
                     /note="aspartyl protease family protein; Provisional"
                     /db_xref="CDD:178691"
     CDS             1..425
                     /gene="LOC107895127"
                     /coded_by="XM_016820359.2:178..1455"
                     /db_xref="GeneID:107895127"
ORIGIN      
        1 mhnplflvlt vifsslvvqp vmgakgfsve lihldspisp fynasltssq ilrknalhsm
       61 drlkhfqfli dqsaiqsavt pnggiylmkl sfgtppvdym avadtgsdli wiqcvpclqs
      121 qcypqgsppf dpqasstykk ipcdsdscqa lpryqcsndv ndcqysysyg dksftkgils
      181 tdtltfddsn gqktafptsi fgcghnnqgk frspsaglvg lgggplslas qisnqidnrf
      241 syclvprsas ssskllfgqe aiisrpgavs tplvsktpqt fyylslegvs igdktaeags
      301 sqgniiidsg ttltylessf yssletivkd aigvdpvkdp sgtfslcyga ktnisvpemv
      361 fhfsgadlll qpqntfrind glfcmlivps dslsifgnya qmnfqveydl qkrtvsfapt
      421 dctkq
//
LOCUS       XP_040941081             378 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941081
VERSION     XP_040941081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085147.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..378
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X1"
                     /calculated_mol_wt=41885
     Region          59..378
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..378
                     /gene="LOC107895128"
                     /coded_by="XM_041085147.1:271..1407"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnkrefrv qaesyhttyk asgqhsrlma
       61 saaietrsnf stqslstndp vvsvdwlhan lrepdlkvld aswympdeqr npiqeyqqva
      121 hipgalffdv dgisdrttkl phmlpseegf avavsalgih nkdglvvydg kgifsaarvw
      181 wmfrvfghdr vwvldgglpr wrssgydves sassdailka saaseaiekv yrgqtagplt
      241 fqtkfqphlv wtldqvrrni eekthqhida rskprfdgaa peprkgirsg hvpgskcipf
      301 pqmldasqtl lpaeelkkrf neegislerp vltscgtgvt acilalglhr lgktdvpvyd
      361 gswtewgaes dtpvdtss
//
LOCUS       XP_016675849             377 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675849
VERSION     XP_016675849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X2"
                     /calculated_mol_wt=41757
     Region          59..377
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..377
                     /gene="LOC107895128"
                     /coded_by="XM_016820360.2:271..1404"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnkrefrv qaesyhttyk asgqhsrlma
       61 saaietrsnf stqslstndp vvsvdwlhan lrepdlkvld aswympdeqr npiqeyqvah
      121 ipgalffdvd gisdrttklp hmlpseegfa vavsalgihn kdglvvydgk gifsaarvww
      181 mfrvfghdrv wvldgglprw rssgydvess assdailkas aaseaiekvy rgqtagpltf
      241 qtkfqphlvw tldqvrrnie ekthqhidar skprfdgaap eprkgirsgh vpgskcipfp
      301 qmldasqtll paeelkkrfn eegislerpv ltscgtgvta cilalglhrl gktdvpvydg
      361 swtewgaesd tpvdtss
//
LOCUS       XP_040941082             377 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941082
VERSION     XP_040941082.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085148.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X3"
                     /calculated_mol_wt=41757
     Region          58..377
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..377
                     /gene="LOC107895128"
                     /coded_by="XM_041085148.1:271..1404"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnrefrvq aesyhttyka sgqhsrlmas
       61 aaietrsnfs tqslstndpv vsvdwlhanl repdlkvlda swympdeqrn piqeyqqvah
      121 ipgalffdvd gisdrttklp hmlpseegfa vavsalgihn kdglvvydgk gifsaarvww
      181 mfrvfghdrv wvldgglprw rssgydvess assdailkas aaseaiekvy rgqtagpltf
      241 qtkfqphlvw tldqvrrnie ekthqhidar skprfdgaap eprkgirsgh vpgskcipfp
      301 qmldasqtll paeelkkrfn eegislerpv ltscgtgvta cilalglhrl gktdvpvydg
      361 swtewgaesd tpvdtss
//
LOCUS       XP_040941083             376 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941083
VERSION     XP_040941083.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085149.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..376
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X4"
                     /calculated_mol_wt=41629
     Region          58..376
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..376
                     /gene="LOC107895128"
                     /coded_by="XM_041085149.1:271..1401"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnrefrvq aesyhttyka sgqhsrlmas
       61 aaietrsnfs tqslstndpv vsvdwlhanl repdlkvlda swympdeqrn piqeyqvahi
      121 pgalffdvdg isdrttklph mlpseegfav avsalgihnk dglvvydgkg ifsaarvwwm
      181 frvfghdrvw vldgglprwr ssgydvessa ssdailkasa aseaiekvyr gqtagpltfq
      241 tkfqphlvwt ldqvrrniee kthqhidars kprfdgaape prkgirsghv pgskcipfpq
      301 mldasqtllp aeelkkrfne egislerpvl tscgtgvtac ilalglhrlg ktdvpvydgs
      361 wtewgaesdt pvdtss
//
LOCUS       XP_040941084             369 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941084
VERSION     XP_040941084.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085150.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..369
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X5"
                     /calculated_mol_wt=40739
     Region          59..369
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..369
                     /gene="LOC107895128"
                     /coded_by="XM_041085150.1:271..1380"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnkrefrv qaesyhttyk asgqhsrlma
       61 saaietrsnf stqslstndp vvsvdwlhan lrepdlkvld aswympdeqr npiqeyqqva
      121 hipgalffdv dgisdrttkl phmlpseegf avavsalgih nkdglvvydg kgifsaarvw
      181 wvwvldgglp rwrssgydve ssassdailk asaaseaiek vyrgqtagpl tfqtkfqphl
      241 vwtldqvrrn ieekthqhid arskprfdga apeprkgirs ghvpgskcip fpqmldasqt
      301 llpaeelkkr fneegisler pvltscgtgv tacilalglh rlgktdvpvy dgswtewgae
      361 sdtpvdtss
//
LOCUS       XP_016675850             368 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016675850
VERSION     XP_016675850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..368
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X6"
                     /calculated_mol_wt=40611
     Region          59..368
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..368
                     /gene="LOC107895128"
                     /coded_by="XM_016820361.2:271..1377"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnkrefrv qaesyhttyk asgqhsrlma
       61 saaietrsnf stqslstndp vvsvdwlhan lrepdlkvld aswympdeqr npiqeyqvah
      121 ipgalffdvd gisdrttklp hmlpseegfa vavsalgihn kdglvvydgk gifsaarvww
      181 vwvldgglpr wrssgydves sassdailka saaseaiekv yrgqtagplt fqtkfqphlv
      241 wtldqvrrni eekthqhida rskprfdgaa peprkgirsg hvpgskcipf pqmldasqtl
      301 lpaeelkkrf neegislerp vltscgtgvt acilalglhr lgktdvpvyd gswtewgaes
      361 dtpvdtss
//
LOCUS       XP_040941085             367 aa            linear   PLN 06-AUG-2024
DEFINITION  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial
            isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040941085
VERSION     XP_040941085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085151.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..367
                     /product="thiosulfate/3-mercaptopyruvate sulfurtransferase
                     1, mitochondrial isoform X7"
                     /calculated_mol_wt=40483
     Region          58..367
                     /region_name="PLN02723"
                     /note="3-mercaptopyruvate sulfurtransferase"
                     /db_xref="CDD:178324"
     CDS             1..367
                     /gene="LOC107895128"
                     /coded_by="XM_041085151.1:271..1374"
                     /db_xref="GeneID:107895128"
ORIGIN      
        1 massllsrtl lghrlirfss slpqnplifs nlfnrefrvq aesyhttyka sgqhsrlmas
       61 aaietrsnfs tqslstndpv vsvdwlhanl repdlkvlda swympdeqrn piqeyqvahi
      121 pgalffdvdg isdrttklph mlpseegfav avsalgihnk dglvvydgkg ifsaarvwwv
      181 wvldgglprw rssgydvess assdailkas aaseaiekvy rgqtagpltf qtkfqphlvw
      241 tldqvrrnie ekthqhidar skprfdgaap eprkgirsgh vpgskcipfp qmldasqtll
      301 paeelkkrfn eegislerpv ltscgtgvta cilalglhrl gktdvpvydg swtewgaesd
      361 tpvdtss
//
LOCUS       XP_040941086             937 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941086
VERSION     XP_040941086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085152.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..937
                     /product="pentatricopeptide repeat-containing protein
                     At3g24000, mitochondrial"
                     /calculated_mol_wt=104603
     Region          <21..>121
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          25..52
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          58..123
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          127..154
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          138..935
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          160..189
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          195..224
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          228..290
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          296..325
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          327..356
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          362..396
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          401..426
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          428..457
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          499..528
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          530..559
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          633..660
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          666..696
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          702..728
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          734..762
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..937
                     /gene="LOC107919883"
                     /coded_by="XM_041085152.1:638..3451"
                     /db_xref="GeneID:107919883"
ORIGIN      
        1 mysrfalvdc arylfdslsv rnaaswntmm sglvrvglyg dvmllfretq nfsvrpsgfl
       61 vssliaacdr sgcmfgegiq vhgfaikvgl lydvfvgscl lhfygaykrv fdaqrifeem
      121 pernvvswts lmfgyldngd fenvmylyqe mrkeeiscne ntfatviaac ssledellgl
      181 kvlahavksg fetkvsvans linmlgslgs lkeayyvfsh mderdtiswn siisahvqng
      241 lfgesmrffh lmrhvhkkin sttlatllsi cssvdnlkwg kgihnlvikl gldsnvctcn
      301 sllgmysegg rlddadfvfk emperdlisw nsmmtcyvrg grsldvlkll nemlqmkkai
      361 nyvtfmsala acsnsefiae gkivhalvil srlhenlavg nasitmyaks gtmveakkvf
      421 qmmpkrnqvt wnaligglae neepdeavka fqlmreegik adyitlsnvl gacltpddll
      481 khglpihahi vligfesnsy vqnslitmya kcgdlqssec ifdgllnknt iswnaiiaan
      541 ahhgleeevl kcivkmknag idldqfsfse glaaaaklav leegqqlhcl avkhgldldp
      601 fvtnaamdmy gkcaemddml rilpqplnrs rlswnilisa farhgyfqka retfnemlem
      661 glkpdhvtfv sllsacshgg lvdeglayya amskefnvpp gikhcvciid llgrsgrlie
      721 aetfinempv ppdalvwrtl lasckihgnl elgkkaaehl fkldpsddsa yvlysnicat
      781 tgkwdavedv rrqmgsynik kkpacswvkl rdqvvlfgmg dqthpqtsei yaklgelrkf
      841 ikeagyvtdt sfalqdtdee qkehnlwnhs erlalafgli ntpngstikv fknlrvcgdc
      901 hsvykfvsgi irrkiilrdp yrfhhfsggq csccdyw
//
LOCUS       XP_016704789             444 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 10 [Gossypium hirsutum].
ACCESSION   XP_016704789
VERSION     XP_016704789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849300.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..444
                     /product="DEAD-box ATP-dependent RNA helicase 10"
                     /calculated_mol_wt=49528
     Region          9..416
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..444
                     /gene="LOC107919884"
                     /coded_by="XM_016849300.2:259..1593"
                     /db_xref="GeneID:107919884"
ORIGIN      
        1 maeeekeemk sfkdlglcee lveacdslgw kyptkiqvea iphalegkdl iglaqtgsgk
       61 tgafalpilh alleshskqg yksapvffal vlsptrelai qiaeqfealg sgislkcavl
      121 vggvdimqqq ialgkrphii vgtpgrlvdh ltntkgfslr mlkflvldea drllnedfek
      181 alddilnvip rdrhtylfsa tmtkkvkklq raclrnpvki eaaskystvd tlkqqyrfip
      241 akykdcylvy iltemsgcts mvftrtcdat rllafilrnl niraipisgq mtqakrlgal
      301 nkfksgecnv lvctdvasrg ldipsvdmvi nydiptnskd yihrvgrtar agrsgvaisl
      361 vnqyelewyl qiekligkkl seypaqeeev lqylesvtea krlsqmklke iggtkkrrgg
      421 ddddediery lgvkgksskk vkrk
//
LOCUS       XP_016704790             160 aa            linear   PLN 06-AUG-2024
DEFINITION  style cell-cycle inhibitor 1-A [Gossypium hirsutum].
ACCESSION   XP_016704790
VERSION     XP_016704790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849301.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..160
                     /product="style cell-cycle inhibitor 1-A"
                     /calculated_mol_wt=19028
     CDS             1..160
                     /gene="LOC107919885"
                     /coded_by="XM_016849301.2:88..570"
                     /db_xref="GeneID:107919885"
ORIGIN      
        1 mgsdrkemrs kkrskfsssg sedegrdkrq rrgeeeeeer ksrkkndkke krkdkkshkh
       61 sshkekklke khkskhhkgd rhskhgfqel snddyfsknn efatwlkeek rvffsdlsse
      121 sarelfadfv kdwnnqklgs qyyegiasgp rtahnwkikq
//
LOCUS       XP_016675856             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_016675856
VERSION     XP_016675856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_016820367.2:682..1128"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_040941087             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_040941087
VERSION     XP_040941087.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085153.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_041085153.1:673..1119"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_016675857             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_016675857
VERSION     XP_016675857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_016820368.2:666..1112"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_040941088             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_040941088
VERSION     XP_040941088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085154.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_041085154.1:1281..1727"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_016675862             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_016675862
VERSION     XP_016675862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820373.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_016820373.2:615..1061"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_016675859             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_016675859
VERSION     XP_016675859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_016820370.2:624..1070"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_016675860             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_016675860
VERSION     XP_016675860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820371.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_016820371.2:608..1054"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_016675861             148 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 8 [Gossypium hirsutum].
ACCESSION   XP_016675861
VERSION     XP_016675861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820372.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="calcium-dependent protein kinase 8"
                     /calculated_mol_wt=17009
     Region          <30..86
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..148
                     /gene="LOC107895133"
                     /coded_by="XM_016820372.2:631..1077"
                     /db_xref="GeneID:107895133"
ORIGIN      
        1 mrqdgsypmg nvpqpvwtap msttdscyyw seteqgvaqa iirsaidfkr dpwpkvsgna
       61 kdlvkkmlnp dpkerltiqe vlehpwlqna kkvpnvplge tvkarlkqfs imnklnkral
      121 rvrihliyif yneqfsilll stfsnyvn
//
LOCUS       XP_040941089             216 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941089
VERSION     XP_040941089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085155.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23907
     CDS             1..216
                     /gene="LOC121212450"
                     /coded_by="XM_041085155.1:111..761"
                     /db_xref="GeneID:121212450"
ORIGIN      
        1 mksggsdnke dwdpvvvlas lknaklneka alelenakre vlqgtgigkd rkdkeeaspe
       61 dkdneatatv egceadvali ldslanamld ektaseqkkt ktgflkdkgs ssdihgrnde
      121 sgqkqrkrsp pppptqfmgr ssrtgykgtl pnattsqtqn pwrttsihqf lpydgrttsa
      181 vasswldtll hswdrrfksy fcmfhflves lgffkf
//
LOCUS       XP_040941090             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941090
VERSION     XP_040941090.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085156.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..171
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=18930
     CDS             1..171
                     /gene="LOC121212451"
                     /coded_by="XM_041085156.1:174..689"
                     /db_xref="GeneID:121212451"
ORIGIN      
        1 mksrgsdyee edwdpvvila slknakldak aalqlekakr evherlgigk dkkdkeeasp
       61 kdednevgft vrgsdavlvl aslatvqvde ktaselekmk seclkgkkdk erpssdtdgr
      121 nderglllls yqgsiatnai yrkikkkqqk assemgdeel srravtehpm p
//
LOCUS       XP_040941092             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941092
VERSION     XP_040941092.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085158.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=17027
     CDS             1..152
                     /gene="LOC121212451"
                     /coded_by="XM_041085158.1:168..626"
                     /db_xref="GeneID:121212451"
ORIGIN      
        1 mksrgsdyee edwdpvvila slknakldak aalqlekakr evherlgigk dkkdkeeasp
       61 kdednevgft vrgsdavlvl aslatvqvde ktaselekmk seclkgkkdk erpssdtdgr
      121 ndergeaspp tqfigrsrrs nrrravrwem rn
//
LOCUS       XP_016675462             242 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB106 [Gossypium hirsutum].
ACCESSION   XP_016675462
VERSION     XP_016675462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819973.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..242
                     /product="transcription factor MYB106"
                     /calculated_mol_wt=27867
     Region          7..>111
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..242
                     /gene="LOC107894735"
                     /coded_by="XM_016819973.2:33..761"
                     /db_xref="GeneID:107894735"
ORIGIN      
        1 mvrqpylkkg twsrdedqkl iayivrygiw nwnempkhag lqrsgkssrl rwmnylrpni
       61 rrgnftreee etiirlqkil gnrwsaiaar lpqrtdndik nywntrlkkr vtsenknsta
      121 attsttetns smvenssdtd sslmltnill dspvstiddl leppayscfs psgsnlvavd
      181 dkysmgtdny lvscwetqsy leqpqmiegl dweavlpnse lshshhqqny vplddfwvnp
      241 li
//
LOCUS       XP_040941093             144 aa            linear   PLN 06-AUG-2024
DEFINITION  dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941093
VERSION     XP_040941093.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085159.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..144
                     /product="dol-P-Man:Man(6)GlcNAc(2)-PP-Dol
                     alpha-1,2-mannosyltransferase-like isoform X1"
                     /calculated_mol_wt=16341
     Region          <24..142
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..144
                     /gene="LOC107895135"
                     /coded_by="XM_041085159.1:308..742"
                     /db_xref="GeneID:107895135"
ORIGIN      
        1 mglttstsvs sllcfswefc qiarkkyapd llivisplyi wlafmslqph keerflypiy
       61 plvcvsasav iesfpdlfrd kynpyynsii vmmakflrpv alslilcash srtfslingy
      121 aapmevykil ehhddagtsd rdfv
//
LOCUS       XP_040941094             140 aa            linear   PLN 06-AUG-2024
DEFINITION  dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941094
VERSION     XP_040941094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085160.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..140
                     /product="dol-P-Man:Man(6)GlcNAc(2)-PP-Dol
                     alpha-1,2-mannosyltransferase-like isoform X2"
                     /calculated_mol_wt=15891
     Region          <24..139
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..140
                     /gene="LOC107895135"
                     /coded_by="XM_041085160.1:302..724"
                     /db_xref="GeneID:107895135"
ORIGIN      
        1 mglttstsvs sllcfswefc qiarkkyapd llivisplyi wlafmslqph keerflypiy
       61 plvcvsasav iesfpdlfrd kynpyynsii vmmakflrpv alslilcash srtfslingy
      121 aapmevykil ehhddagtir
//
LOCUS       XP_016674383             209 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase AIRP1 [Gossypium hirsutum].
ACCESSION   XP_016674383
VERSION     XP_016674383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818894.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase AIRP1"
                     /calculated_mol_wt=23247
     Region          137..185
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(141,144,159,161,164,167,178,181)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..209
                     /gene="LOC107893802"
                     /coded_by="XM_016818894.2:199..828"
                     /db_xref="GeneID:107893802"
ORIGIN      
        1 mgacccclgi rdpelhvstf islnsvihal rgkftgvrsn eqsdspalns qvsapldsna
       61 afnniithta rvlhseadtt psyeydrieg redyrinhte hasignksag vqcesqlkfs
      121 hdkpetevgc dygslededv cptcledyip enprivlqcs htyhlgciye wmersencpi
      181 cakmmmfgev eigspltkde rmifegtfq
//
LOCUS       XP_040941095             299 aa            linear   PLN 06-AUG-2024
DEFINITION  polyprenol reductase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941095
VERSION     XP_040941095.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085161.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..299
                     /product="polyprenol reductase 2 isoform X1"
                     /calculated_mol_wt=34223
     Region          16..299
                     /region_name="ICMT"
                     /note="Isoprenylcysteine carboxyl methyltransferase (ICMT)
                     family; cl21511"
                     /db_xref="CDD:473892"
     CDS             1..299
                     /gene="LOC107903719"
                     /coded_by="XM_041085161.1:202..1101"
                     /db_xref="GeneID:107903719"
ORIGIN      
        1 mevglvallr ltwvaailpi ilaslrlrpf hqtilglakr gktmhpsssk ftvpqrffsh
       61 fymvgtlwtt llllttwlya ctagstssti falhkshrvw ralfllwlme aqvlrrlyes
      121 lyvfhyrpla rmhifgyfig msyyivasls lcctcapevf eftldlvseg rkqwqplevi
      181 ggnrsplwlg wkqwvgsaif lwgwihqlri lgsmraggee yvipkgdwfe ivssphylae
      241 iviyvgllia sggaditiwl llafvvtnlg faaaetqkwy igkfedypkh ryamipfif
//
LOCUS       XP_040941096             298 aa            linear   PLN 06-AUG-2024
DEFINITION  polyprenol reductase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941096
VERSION     XP_040941096.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085162.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..298
                     /product="polyprenol reductase 2 isoform X2"
                     /calculated_mol_wt=34094
     Region          16..298
                     /region_name="ICMT"
                     /note="Isoprenylcysteine carboxyl methyltransferase (ICMT)
                     family; cl21511"
                     /db_xref="CDD:473892"
     CDS             1..298
                     /gene="LOC107903719"
                     /coded_by="XM_041085162.1:112..1008"
                     /db_xref="GeneID:107903719"
ORIGIN      
        1 mevglvallr ltwvaailpi ilaslrlrpf hqtilglakr gktmhpsssf tvpqrffshf
       61 ymvgtlwttl lllttwlyac tagstsstif alhkshrvwr alfllwlmea qvlrrlyesl
      121 yvfhyrplar mhifgyfigm syyivaslsl cctcapevfe ftldlvsegr kqwqplevig
      181 gnrsplwlgw kqwvgsaifl wgwihqlril gsmraggeey vipkgdwfei vssphylaei
      241 viyvgllias ggaditiwll lafvvtnlgf aaaetqkwyi gkfedypkhr yamipfif
//
LOCUS       XP_040941097             269 aa            linear   PLN 06-AUG-2024
DEFINITION  polyprenol reductase 2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941097
VERSION     XP_040941097.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085163.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..269
                     /product="polyprenol reductase 2 isoform X3"
                     /calculated_mol_wt=30902
     Region          16..269
                     /region_name="ICMT"
                     /note="Isoprenylcysteine carboxyl methyltransferase (ICMT)
                     family; cl21511"
                     /db_xref="CDD:473892"
     CDS             1..269
                     /gene="LOC107903719"
                     /coded_by="XM_041085163.1:178..987"
                     /db_xref="GeneID:107903719"
ORIGIN      
        1 mevglvallr ltwvaailpi ilaslrlrpf hqtilglakr gktmhpsssk ftvpqrffsh
       61 fymvgtlwtt llllttwlya ctagstssti falhkshrvw ralfllwlme aqvlrrlyes
      121 lyvfhyrpla rmhifgyfig msyyivasls lcctcapevf eftldlvseg rkqwqplevi
      181 ggnrsplwlg wkqwvgsaif lwgwihqlri lviyvgllia sggaditiwl llafvvtnlg
      241 faaaetqkwy igkfedypkh ryamipfif
//
LOCUS       XP_016674390             231 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS32 [Gossypium hirsutum].
ACCESSION   XP_016674390
VERSION     XP_016674390.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818901.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..231
                     /product="universal stress protein PHOS32"
                     /calculated_mol_wt=25795
     Region          67..207
                     /region_name="USP-like"
                     /note="universal stress protein (USP) and similar
                     proteins; cd00293"
                     /db_xref="CDD:467483"
     CDS             1..231
                     /gene="LOC107893810"
                     /coded_by="XM_016818901.2:376..1071"
                     /db_xref="GeneID:107893810"
ORIGIN      
        1 mgrsgtrlps fclnrirphv rvrsppiqak anlnsattdh khenngklee dkpshgekkp
       61 dfvmgrkimi vvdssiearg alqwalshtv qchdtvilly vtkpskqvpv tndesnenra
      121 yepistlktm ckqkrpevev evavvegkek gptiveeakk qgaallvlgr kkksmtwrli
      181 mmwagnritg gvveyciqna scmavavrrk skklggylit tkrhkdfwll a
//
LOCUS       XP_016677265             371 aa            linear   PLN 06-AUG-2024
DEFINITION  COBW domain-containing protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016677265
VERSION     XP_016677265.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016821776.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..371
                     /product="COBW domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=41711
     Region          38..371
                     /region_name="YejR"
                     /note="Zinc metallochaperone YeiR/ZagA and related
                     GTPases, G3E family [General function prediction only];
                     COG0523"
                     /db_xref="CDD:440289"
     CDS             1..371
                     /gene="LOC107896579"
                     /coded_by="XM_016821776.2:304..1419"
                     /db_xref="GeneID:107896579"
ORIGIN      
        1 maddqeeppl airidqtvee psqsdqekhq ndyvsvgvtv itgylgagks tlvnyilnaq
       61 hgkriaviln efgeeigver aminegesga lveewvelan gcvcctvkhs lvqaleqlvq
      121 mkkkldhill ettglanpap lasvlwlddq lessvkldsi vtvvdaknlr fqlnrhcdss
      181 sfpeaflqia fadvvilnkv dlvsqeqsec aleeleneih sinslaniir sircevdlsq
      241 ilnrqaydat hathlealle eskslssrdl hdsgvctlci nqmeavdlhk vrlwieeilw
      301 dkkygmdvyr ckgvlrvgns dqlhtlqavr eiyeivptrq wrneerqmnr ivfighnlde
      361 nilidtfrgc i
//
LOCUS       XP_040941099             344 aa            linear   PLN 06-AUG-2024
DEFINITION  COBW domain-containing protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941099
VERSION     XP_040941099.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085165.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="COBW domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=38128
     Region          38..243
                     /region_name="CobW-like"
                     /note="cobalamin synthesis protein CobW; cd03112"
                     /db_xref="CDD:349766"
     Site            order(46..51,131,198..199)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:349766"
     Site            order(69,74,104)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:349766"
     CDS             1..344
                     /gene="LOC107896579"
                     /coded_by="XM_041085165.1:150..1184"
                     /db_xref="GeneID:107896579"
ORIGIN      
        1 maddqeeppl airidqtvee psqsdqekhq ndyvsvgvtv itgylgagks tlvnyilnaq
       61 hgkriaviln efgeeigver aminegesga lveewvelan gcvcctvkhs lvqaleqlvq
      121 mkkkldhill ettglanpap lasvlwlddq lessvkldsi vtvvdaknlr fqlnrhcdss
      181 sfpeaflqia fadvvilnkv dlvsqeqsec aleeleneih sinslaniir sircevdlsq
      241 ilnrqaydat hathlealle eskslssrdl hdsgvctlci nqmeavdlhk vasghnllds
      301 ftyklmsvcg lrrfsgirnm awmyiaakgf yvletlinyi lcrl
//
LOCUS       XP_016674208             513 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucose 6-dehydrogenase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674208
VERSION     XP_016674208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818719.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..513
                     /product="UDP-glucose 6-dehydrogenase 1 isoform X1"
                     /calculated_mol_wt=56368
     Region          34..506
                     /region_name="PLN02353"
                     /note="probable UDP-glucose 6-dehydrogenase"
                     /db_xref="CDD:177986"
     CDS             1..513
                     /gene="LOC107893665"
                     /coded_by="XM_016818719.2:24..1565"
                     /db_xref="GeneID:107893665"
ORIGIN      
        1 mqnhlndefv fryklvgsve yiksgkdqli lskmvkicci gagyvggptm avialkcpni
       61 qvavvdista rinawnsdtl piyepgldev vkkcrgknls fstdvekhva esdivfvsvn
      121 tptktqglga gkaadltywe saarmiadva ksnkivveks tvpvktaeai ekilthnskg
      181 infsilsnpe flaegtaisd llnpdrvlig gretpegkka iealrdvyah wvpvdrilct
      241 nlwsaelskl aanaflaqri ssvnamsalc eatgadvsqv ahavgkdtri gpkflnasvg
      301 fggscfqkdi lnlvyicecn glpevatywk qvikvndyqk trfvnrivss mfntvsgkki
      361 avlgfafkkd tgdtretpai dvckgligdk aklsiydpqv nqdqiqrdls mkkfdwdhpv
      421 hlqpmsptsv kdvsvvwday tatkdahgic iltewdefkn ldyqkifndm qkpafvfdgr
      481 nvvdaeklrk igfivysigk plddwlkdmp ava
//
LOCUS       XP_040941100             480 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucose 6-dehydrogenase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941100
VERSION     XP_040941100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085166.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="UDP-glucose 6-dehydrogenase 5 isoform X2"
                     /calculated_mol_wt=52486
     Region          1..473
                     /region_name="PLN02353"
                     /note="probable UDP-glucose 6-dehydrogenase"
                     /db_xref="CDD:177986"
     CDS             1..480
                     /gene="LOC107893665"
                     /coded_by="XM_041085166.1:168..1610"
                     /db_xref="GeneID:107893665"
ORIGIN      
        1 mvkiccigag yvggptmavi alkcpniqva vvdistarin awnsdtlpiy epgldevvkk
       61 crgknlsfst dvekhvaesd ivfvsvntpt ktqglgagka adltywesaa rmiadvaksn
      121 kivvekstvp vktaeaieki lthnskginf silsnpefla egtaisdlln pdrvliggre
      181 tpegkkaiea lrdvyahwvp vdrilctnlw saelsklaan aflaqrissv namsalceat
      241 gadvsqvaha vgkdtrigpk flnasvgfgg scfqkdilnl vyicecnglp evatywkqvi
      301 kvndyqktrf vnrivssmfn tvsgkkiavl gfafkkdtgd tretpaidvc kgligdkakl
      361 siydpqvnqd qiqrdlsmkk fdwdhpvhlq pmsptsvkdv svvwdaytat kdahgicilt
      421 ewdefknldy qkifndmqkp afvfdgrnvv daeklrkigf ivysigkpld dwlkdmpava
//
LOCUS       XP_016674209             480 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucose 6-dehydrogenase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674209
VERSION     XP_016674209.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818720.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="UDP-glucose 6-dehydrogenase 5 isoform X2"
                     /calculated_mol_wt=52486
     Region          1..473
                     /region_name="PLN02353"
                     /note="probable UDP-glucose 6-dehydrogenase"
                     /db_xref="CDD:177986"
     CDS             1..480
                     /gene="LOC107893665"
                     /coded_by="XM_016818720.2:158..1600"
                     /db_xref="GeneID:107893665"
ORIGIN      
        1 mvkiccigag yvggptmavi alkcpniqva vvdistarin awnsdtlpiy epgldevvkk
       61 crgknlsfst dvekhvaesd ivfvsvntpt ktqglgagka adltywesaa rmiadvaksn
      121 kivvekstvp vktaeaieki lthnskginf silsnpefla egtaisdlln pdrvliggre
      181 tpegkkaiea lrdvyahwvp vdrilctnlw saelsklaan aflaqrissv namsalceat
      241 gadvsqvaha vgkdtrigpk flnasvgfgg scfqkdilnl vyicecnglp evatywkqvi
      301 kvndyqktrf vnrivssmfn tvsgkkiavl gfafkkdtgd tretpaidvc kgligdkakl
      361 siydpqvnqd qiqrdlsmkk fdwdhpvhlq pmsptsvkdv svvwdaytat kdahgicilt
      421 ewdefknldy qkifndmqkp afvfdgrnvv daeklrkigf ivysigkpld dwlkdmpava
//
LOCUS       XP_016683887             645 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016683887
VERSION     XP_016683887.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828398.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016683887.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..645
                     /product="uncharacterized protein"
                     /calculated_mol_wt=74281
     Region          403..644
                     /region_name="DUF1666"
                     /note="Protein of unknown function (DUF1666); pfam07891"
                     /db_xref="CDD:462306"
     CDS             1..645
                     /gene="LOC107902174"
                     /coded_by="XM_016828398.2:167..2104"
                     /db_xref="GeneID:107902174"
ORIGIN      
        1 mrgliesmgi nrfillkkth fayaflhrnm frvlvsfwvf lsklirsffr fstsrflegs
       61 dsniddfnei qssdhvdegn retksspmva stskneflcs tgisgfveep etksftvhaf
      121 fmgsndyvea ekteetnavf eekteecalr fsffefekqi evikqeepve dyagrssves
      181 svekqggdie gnehvadvfe sivvgkcsgk chkdntgkei hecntrisdh keptifeepv
      241 ndseedlnae tesiaspekt iepnmqeeee eeddddlidr lkmevkiara gglatiledf
      301 espkmvqelg plkidekydh khhmgeiqkv yksysdkmrk ldilnsqtmh aisllklkdv
      361 piqvstlgks saaatnslhk alsfkqrtae aepamklird lhkefetvyv gqiclswail
      421 lwqfgqvkkl ldcdnslaih hynqvaeefq hfqvllqrfi edepfrtghr venytysrcs
      481 vrhllqvpvi kddcskskdd aiscemlkdi ieesllvfwe flradkdean stskalrsqv
      541 aphepidfef lmdvkthlhk kekrlkeiqr gtnciikkfq rqqhqgnlld yalfiaqvel
      601 klvsrvlnms kistdqlawc heklqrirfs srkieiepsf tlfpc
//
LOCUS       XP_040941101             245 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein MADS2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941101
VERSION     XP_040941101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085167.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="agamous-like MADS-box protein MADS2 isoform X1"
                     /calculated_mol_wt=27769
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          83..173
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..245
                     /gene="LOC107893809"
                     /coded_by="XM_041085167.1:325..1062"
                     /db_xref="GeneID:107893809"
ORIGIN      
        1 mgrgrvelkr ienkinrqvt fakrrngllk kayelsilcd aevaliifsn rgklyefcst
       61 ssmaktleky nsytygalep aqteidaqqs nyqeylklks kvevlqqsqr hflgeeiadl
      121 gtkeleqleh qldfslkkir stkmqlmidq lselqtkeev lletnrnlrm kldesgpsmr
      181 sswetgeqsi pynhpppppq segffeplhc nnslqigynp ssvtvedtat asalapsgfi
      241 pgwml
//
LOCUS       XP_016674389             244 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein MADS2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674389
VERSION     XP_016674389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818900.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="agamous-like MADS-box protein MADS2 isoform X2"
                     /calculated_mol_wt=27641
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          88..172
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..244
                     /gene="LOC107893809"
                     /coded_by="XM_016818900.2:330..1064"
                     /db_xref="GeneID:107893809"
ORIGIN      
        1 mgrgrvelkr ienkinrqvt fakrrngllk kayelsilcd aevaliifsn rgklyefcst
       61 ssmaktleky nsytygalep aqteidaqsn yqeylklksk vevlqqsqrh flgeeiadlg
      121 tkeleqlehq ldfslkkirs tkmqlmidql selqtkeevl letnrnlrmk ldesgpsmrs
      181 swetgeqsip ynhpppppqs egffeplhcn nslqigynps svtvedtata salapsgfip
      241 gwml
//
LOCUS       XP_016674111             200 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized GPI-anchored protein At5g19250 [Gossypium
            hirsutum].
ACCESSION   XP_016674111
VERSION     XP_016674111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818622.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..200
                     /product="uncharacterized GPI-anchored protein At5g19250"
                     /calculated_mol_wt=21662
     CDS             1..200
                     /gene="LOC107893589"
                     /coded_by="XM_016818622.2:144..746"
                     /db_xref="GeneID:107893589"
ORIGIN      
        1 maaaslrqps lttfvfvlai fslshrvysd deedhllqgl nsyrtsanlp afaknknaec
       61 vakriaddvs dddnnqhctn psnspgnnat glsaypkais kcdidantts dvmvlpvcvp
      121 nlvptlvltn ftrthyskyi ndstftgigl sseddwmvvv lssnkptgsl angaysllnr
      181 klgfsyymvl fllgfllfss
//
LOCUS       XP_040941102             143 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR71 [Gossypium hirsutum].
ACCESSION   XP_040941102
VERSION     XP_040941102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085168.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..143
                     /product="auxin-responsive protein SAUR71"
                     /calculated_mol_wt=16248
     Region          <55..115
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..143
                     /gene="LOC121212455"
                     /coded_by="XM_041085168.1:210..641"
                     /db_xref="GeneID:121212455"
ORIGIN      
        1 mkqlirrfsr vadsssqyrl lrsdtsnrer atptrsaesf liavssvkkp grrsvpqghv
       61 pvyvgeemer fvvnaellnh pvfvgllnks aqeygyeqkg vlripchvlv fervmealrl
      121 gvesrdlqdl lrsfsddccf ldf
//
LOCUS       XP_040941103             269 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941103
VERSION     XP_040941103.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085169.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..269
                     /product="renalase isoform X1"
                     /calculated_mol_wt=29776
     Region          85..>245
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..269
                     /gene="LOC107942606"
                     /coded_by="XM_041085169.1:100..909"
                     /db_xref="GeneID:107942606"
ORIGIN      
        1 mapsalpsfs ssflfplktq ksfkppkplt iicssqepkk psknpqrpts rnrkrtpygt
       61 srrsilkitf tqeqvkftag vsadphvgii gggmagllca lslekrgvks tvfdtgmhgl
      121 ggrmgtrvid pqqlifdhaa qfftvsdsrf sklvdywlek glvrewkglv gqlelggrfv
      181 plpsspprfi gvngmrplad sllsetsmvn vvrpcwiskl epfngmwhls engkprgefd
      241 aiviahngnf vpqylcffll shffqfkfa
//
LOCUS       XP_016731793             254 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016731793
VERSION     XP_016731793.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876304.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..254
                     /product="renalase isoform X2"
                     /calculated_mol_wt=27957
     Region          85..>245
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..254
                     /gene="LOC107942606"
                     /coded_by="XM_016876304.2:100..864"
                     /db_xref="GeneID:107942606"
ORIGIN      
        1 mapsalpsfs ssflfplktq ksfkppkplt iicssqepkk psknpqrpts rnrkrtpygt
       61 srrsilkitf tqeqvkftag vsadphvgii gggmagllca lslekrgvks tvfdtgmhgl
      121 ggrmgtrvid pqqlifdhaa qfftvsdsrf sklvdywlek glvrewkglv gqlelggrfv
      181 plpsspprfi gvngmrplad sllsetsmvn vvrpcwiskl epfngmwhls engkprgefd
      241 aiviahndcr lftk
//
LOCUS       XP_016683323             439 aa            linear   PLN 06-AUG-2024
DEFINITION  probable folate-biopterin transporter 7 [Gossypium hirsutum].
ACCESSION   XP_016683323
VERSION     XP_016683323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016827834.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..439
                     /product="probable folate-biopterin transporter 7"
                     /calculated_mol_wt=47578
     Region          31..431
                     /region_name="BT1"
                     /note="BT1 family; pfam03092"
                     /db_xref="CDD:308617"
     CDS             1..439
                     /gene="LOC107901722"
                     /coded_by="XM_016827834.2:236..1555"
                     /db_xref="GeneID:107901722"
ORIGIN      
        1 msakedakgr rpgkgkakwi rillgvgywv qgfrcfpwma vnfflkdsvk vdsstlqilq
       61 nsvnlpmvgk piygvvsdav yisgqhrvpy iaigaflqam swltivilsq snisvvtlsl
      121 ylllsnlgas vaevandaiv aemgksensq sassgelqsf vwmassvggv lgnllggaai
      181 drfspqsmfi ffglllvlqf litisvpers lnlpkspsnv girkqlsels aalqkpeiay
      241 siawfaasya iipaltgtmf fyqtqylkid aavlgiskvf gqvvtllwgi iynrslksvq
      301 prklietiqa tmavfmisdv lfikgiyrqm gvpdsiyivv fsgvlevlff fkilpfsili
      361 aqlcprgceg slmafvmsav alafivsgyl gvalasylgv tgndfsglpl glliqavctf
      421 lplfssswip dqksktrte
//
LOCUS       XP_016683318             439 aa            linear   PLN 06-AUG-2024
DEFINITION  probable folate-biopterin transporter 7 [Gossypium hirsutum].
ACCESSION   XP_016683318
VERSION     XP_016683318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016827829.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..439
                     /product="probable folate-biopterin transporter 7"
                     /calculated_mol_wt=47578
     Region          31..431
                     /region_name="BT1"
                     /note="BT1 family; pfam03092"
                     /db_xref="CDD:308617"
     CDS             1..439
                     /gene="LOC107901722"
                     /coded_by="XM_016827829.2:247..1566"
                     /db_xref="GeneID:107901722"
ORIGIN      
        1 msakedakgr rpgkgkakwi rillgvgywv qgfrcfpwma vnfflkdsvk vdsstlqilq
       61 nsvnlpmvgk piygvvsdav yisgqhrvpy iaigaflqam swltivilsq snisvvtlsl
      121 ylllsnlgas vaevandaiv aemgksensq sassgelqsf vwmassvggv lgnllggaai
      181 drfspqsmfi ffglllvlqf litisvpers lnlpkspsnv girkqlsels aalqkpeiay
      241 siawfaasya iipaltgtmf fyqtqylkid aavlgiskvf gqvvtllwgi iynrslksvq
      301 prklietiqa tmavfmisdv lfikgiyrqm gvpdsiyivv fsgvlevlff fkilpfsili
      361 aqlcprgceg slmafvmsav alafivsgyl gvalasylgv tgndfsglpl glliqavctf
      421 lplfssswip dqksktrte
//
LOCUS       XP_016683904             545 aa            linear   PLN 06-AUG-2024
DEFINITION  probable apyrase 6 [Gossypium hirsutum].
ACCESSION   XP_016683904
VERSION     XP_016683904.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828415.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..545
                     /product="probable apyrase 6"
                     /calculated_mol_wt=61319
     Region          81..475
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..545
                     /gene="LOC107902190"
                     /coded_by="XM_016828415.2:339..1976"
                     /db_xref="GeneID:107902190"
ORIGIN      
        1 mrrsharnrv esksksttnp qkmdpiklqi rsnsrstalf srnsrqtksi psfvavsiai
       61 slalfafiyi fffsskgsvk ygiiidggst gtrihviryr vdggknpvfd fkegldslrv
      121 npglsayaed lagagyslke llefarrkvp kkqwgeteir lmatagmrll ddevqerile
      181 qcrkvlrvsg fkfrddwasv itgsdegvya wvvanyvlgt lggnplhttg iielggasaq
      241 vtffsnepmp sefsrsikfg nityslyshs flhfgqnvah eslrallvkg dfspaadslh
      301 kemyidpcmp kgyfpessnl slgsvaeksk yisefkargn fsecrsaalm llqkgkercs
      361 ydhcylgsvf mpklrgkfla tenffytskf frlrqrafls dlimagkhfc eedwsklkkk
      421 hqslneedll rycfssayiv allhdsleia ldderisfan qvndipldwa lgafilqstt
      481 isdvqqtdwi tiimssdsst lisitaisai lmfaawsisk wrkpqlktvy dlekgryiit
      541 rigrs
//
LOCUS       XP_040941104             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941104
VERSION     XP_040941104.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085170.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29833
     Region          56..102
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          107..224
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..273
                     /gene="LOC107902201"
                     /coded_by="XM_041085170.1:217..1038"
                     /db_xref="GeneID:107902201"
ORIGIN      
        1 msdhlvlyvd rlvrpvparp vesgagpste ekekvkdkev fqgsneedpl iqvaecricq
       61 eedsiknlet pcacngslky ahrkcvqhwc nekgdiicei chqsyqpdyt apprpptdet
      121 aidigggwti sgtpldlrdp rllaiaeaer qfletgydey aasnatgaaf crsaavilma
      181 llllrhavtv pdadsdddvs sffsffllra agfllpcyim awaisilqqr rqrqeaaala
      241 atqvafvlqs gqsrgmhfai asgpavtphp env
//
LOCUS       XP_040941105             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941105
VERSION     XP_040941105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085171.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29833
     Region          56..102
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          107..224
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..273
                     /gene="LOC107902201"
                     /coded_by="XM_041085171.1:129..950"
                     /db_xref="GeneID:107902201"
ORIGIN      
        1 msdhlvlyvd rlvrpvparp vesgagpste ekekvkdkev fqgsneedpl iqvaecricq
       61 eedsiknlet pcacngslky ahrkcvqhwc nekgdiicei chqsyqpdyt apprpptdet
      121 aidigggwti sgtpldlrdp rllaiaeaer qfletgydey aasnatgaaf crsaavilma
      181 llllrhavtv pdadsdddvs sffsffllra agfllpcyim awaisilqqr rqrqeaaala
      241 atqvafvlqs gqsrgmhfai asgpavtphp env
//
LOCUS       XP_040941106             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941106
VERSION     XP_040941106.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085172.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29833
     Region          56..102
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          107..224
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..273
                     /gene="LOC107902201"
                     /coded_by="XM_041085172.1:154..975"
                     /db_xref="GeneID:107902201"
ORIGIN      
        1 msdhlvlyvd rlvrpvparp vesgagpste ekekvkdkev fqgsneedpl iqvaecricq
       61 eedsiknlet pcacngslky ahrkcvqhwc nekgdiicei chqsyqpdyt apprpptdet
      121 aidigggwti sgtpldlrdp rllaiaeaer qfletgydey aasnatgaaf crsaavilma
      181 llllrhavtv pdadsdddvs sffsffllra agfllpcyim awaisilqqr rqrqeaaala
      241 atqvafvlqs gqsrgmhfai asgpavtphp env
//
LOCUS       XP_040941107             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941107
VERSION     XP_040941107.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085173.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29833
     Region          56..102
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          107..224
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..273
                     /gene="LOC107902201"
                     /coded_by="XM_041085173.1:142..963"
                     /db_xref="GeneID:107902201"
ORIGIN      
        1 msdhlvlyvd rlvrpvparp vesgagpste ekekvkdkev fqgsneedpl iqvaecricq
       61 eedsiknlet pcacngslky ahrkcvqhwc nekgdiicei chqsyqpdyt apprpptdet
      121 aidigggwti sgtpldlrdp rllaiaeaer qfletgydey aasnatgaaf crsaavilma
      181 llllrhavtv pdadsdddvs sffsffllra agfllpcyim awaisilqqr rqrqeaaala
      241 atqvafvlqs gqsrgmhfai asgpavtphp env
//
LOCUS       XP_040941108             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941108
VERSION     XP_040941108.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085174.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=28590
     Region          56..102
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          107..224
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..257
                     /gene="LOC107902201"
                     /coded_by="XM_041085174.1:150..923"
                     /db_xref="GeneID:107902201"
ORIGIN      
        1 msdhlvlyvd rlvrpvparp vesgagpste ekekvkdkev fqgsneedpl iqvaecricq
       61 eedsiknlet pcacngslky ahrkcvqhwc nekgdiicei chqsyqpdyt apprpptdet
      121 aidigggwti sgtpldlrdp rllaiaeaer qfletgydey aasnatgaaf crsaavilma
      181 llllrhavtv pdadsdddvs sffsffllra agfllpcyim awaisilqqr rqrqqrwlpp
      241 klllyynlgk vgvcisq
//
LOCUS       XP_040941109             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941109
VERSION     XP_040941109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085175.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=28590
     Region          56..102
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          107..224
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..257
                     /gene="LOC107902201"
                     /coded_by="XM_041085175.1:131..904"
                     /db_xref="GeneID:107902201"
ORIGIN      
        1 msdhlvlyvd rlvrpvparp vesgagpste ekekvkdkev fqgsneedpl iqvaecricq
       61 eedsiknlet pcacngslky ahrkcvqhwc nekgdiicei chqsyqpdyt apprpptdet
      121 aidigggwti sgtpldlrdp rllaiaeaer qfletgydey aasnatgaaf crsaavilma
      181 llllrhavtv pdadsdddvs sffsffllra agfllpcyim awaisilqqr rqrqqrwlpp
      241 klllyynlgk vgvcisq
//
LOCUS       XP_016688385             112 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016688385
VERSION     XP_016688385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832896.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12098
     CDS             1..112
                     /gene="LOC107906048"
                     /coded_by="XM_016832896.1:129..467"
                     /db_xref="GeneID:107906048"
ORIGIN      
        1 mhrrdrlgrw pslcigatls pvsdpvqrps llglnterkn llapplepis aterapttrp
       61 rapqvpvads ggrgvrvgva deeverhtcg awrlgfplia eiffkfcglg fs
//
LOCUS       XP_016683938             420 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid transporter AVT1I [Gossypium hirsutum].
ACCESSION   XP_016683938
VERSION     XP_016683938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828449.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..420
                     /product="amino acid transporter AVT1I"
                     /calculated_mol_wt=46263
     Region          31..413
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..420
                     /gene="LOC107902231"
                     /coded_by="XM_016828449.2:50..1312"
                     /db_xref="GeneID:107902231"
ORIGIN      
        1 mwvyechkmd ftkagklesq nevqqpqqpt kgtsffrtcf nglnalsgvg ilsipyalaq
       61 ggwlsllllf lvavlcwytg lllrrcmdth pliktypdig erafgykgra ivsvfmyvel
      121 ylvaveflil egdnldklfp ntafkvaglk irgkqafvml tslivlpttw lkslallayv
      181 saggvlasfi lvicifwvga vdkvgfhend svlnwkgmpi aismfafcyc ghavfptlcs
      241 smkdrskfsk vllvcfitst inygsmavmg ylmfgehlks qvtlnlpikk mstkiaiytt
      301 linpltkyai ittpittaie etslfrnsrs lsilirtalv istvivalti pffgyvmafi
      361 gsflsvtasm llpclcylkl nkaarkmgle liiivailva glfigvvgtf tsikqivnhl
//
LOCUS       XP_016683946             275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016683946
VERSION     XP_016683946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828457.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=31332
     CDS             1..275
                     /gene="LOC107902242"
                     /coded_by="XM_016828457.2:207..1034"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe eliykfssdi
      241 ltmklefdfd dganseiltp qvallvkkgv iafev
//
LOCUS       XP_016683954             272 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016683954
VERSION     XP_016683954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..272
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=30939
     CDS             1..272
                     /gene="LOC107902242"
                     /coded_by="XM_016828465.2:207..1025"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe vdsdnvdkmm
      241 lekgqlrlsq lrrkvrsgnv dlvaptdvgn tv
//
LOCUS       XP_016683964             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016683964
VERSION     XP_016683964.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828475.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..271
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=30840
     CDS             1..271
                     /gene="LOC107902242"
                     /coded_by="XM_016828475.2:207..1022"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe dsdnvdkmml
      241 ekgqlrlsql rrkvrsgnvd lvaptdvgnt v
//
LOCUS       XP_040941110             268 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941110
VERSION     XP_040941110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085176.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..268
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=30582
     CDS             1..268
                     /gene="LOC107902242"
                     /coded_by="XM_041085176.1:207..1013"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe vdsdnvdkmm
      241 lekgqlrlsq lrrkvrsgnv dlvaptdn
//
LOCUS       XP_040941111             268 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941111
VERSION     XP_040941111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085177.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..268
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=30582
     CDS             1..268
                     /gene="LOC107902242"
                     /coded_by="XM_041085177.1:207..1013"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe vdsdnvdkmm
      241 lekgqlrlsq lrrkvrsgnv dlvaptdn
//
LOCUS       XP_040941112             267 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941112
VERSION     XP_040941112.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085178.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..267
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=30483
     CDS             1..267
                     /gene="LOC107902242"
                     /coded_by="XM_041085178.1:207..1010"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe dsdnvdkmml
      241 ekgqlrlsql rrkvrsgnvd lvaptdn
//
LOCUS       XP_016683971             248 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016683971
VERSION     XP_016683971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=28464
     CDS             1..248
                     /gene="LOC107902242"
                     /coded_by="XM_016828482.2:207..953"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe eliykfssdi
      241 ltmkleys
//
LOCUS       XP_040941113             231 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941113
VERSION     XP_040941113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085179.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..231
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=26401
     CDS             1..231
                     /gene="LOC107902242"
                     /coded_by="XM_041085179.1:207..902"
                     /db_xref="GeneID:107902242"
ORIGIN      
        1 mtikqrqycr dvsqqkqivv secrkerise emslkfegkl tegsnnqlli lanfaelise
       61 seyilptvhe npqndedssm eaqnlqenad dvmakssdkn wgeademppi shdrnerdgs
      121 hgegtvprls hirrqarlki qsfmkqsiqe dsyrtlqgsk mrltqirrqa rsgnhiprln
      181 isavcshgkl lggitrlsqi rrearsknnc srqeetgepm hvqldcqfhe v
//
LOCUS       XP_016683995             309 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016683995
VERSION     XP_016683995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..309
                     /product="myb family transcription factor PHL8 isoform X1"
                     /calculated_mol_wt=33891
     Region          10..66
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          101..147
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..309
                     /gene="LOC107902293"
                     /coded_by="XM_016828506.2:476..1405"
                     /db_xref="GeneID:107902293"
ORIGIN      
        1 mnlvlstdak prlkwtpelh qrfvdainql ggtdkatpks vmrvmgipgl tlyhlkshlq
       61 kyrlgkslgn ntdykeiqss ngnfirdtsd gihgqmnesl qipqalhmqm evqrklheqi
      121 evqrhlqlri eaqgkylqtv lkkaqetlag yssssagael araelsqlvs mvntgctsss
      181 fseltevggs siierkpmrg ttcsmgsslt ssessgrndk aplengnict qnvelslmdf
      241 lpekkplisc asnqangkkr svskvsdgvc veqplakrle lpeeetggcl rksgflelfd
      301 lnnqchndi
//
LOCUS       XP_040941114             308 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941114
VERSION     XP_040941114.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085180.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..308
                     /product="myb family transcription factor PHL8 isoform X2"
                     /calculated_mol_wt=33726
     Region          9..65
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          100..146
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..308
                     /gene="LOC107902293"
                     /coded_by="XM_041085180.1:377..1303"
                     /db_xref="GeneID:107902293"
ORIGIN      
        1 mvstkkgskn tlkwtpelhq rfvdainqlg gtdkatpksv mrvmgipglt lyhlkshlqk
       61 yrlgkslgnn tdykeiqssn gnfirdtsdg ihgqmneslq ipqalhmqme vqrklheqie
      121 vqrhlqlrie aqgkylqtvl kkaqetlagy ssssagaela raelsqlvsm vntgctsssf
      181 seltevggss iierkpmrgt tcsmgsslts sessgrndka plengnictq nvelslmdfl
      241 pekkplisca snqangkkrs vskvsdgvcv eqplakrlel peeetggclr ksgflelfdl
      301 nnqchndi
//
LOCUS       XP_016683999             308 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016683999
VERSION     XP_016683999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..308
                     /product="myb family transcription factor PHL8 isoform X3"
                     /calculated_mol_wt=33790
     Region          10..66
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          100..146
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..308
                     /gene="LOC107902293"
                     /coded_by="XM_016828510.2:496..1422"
                     /db_xref="GeneID:107902293"
ORIGIN      
        1 mnlvlstdak prlkwtpelh qrfvdainql ggtdkatpks vmrvmgipgl tlyhlkshlq
       61 kyrlgkslgn ntdykeiqss ngnfirdtsd gihgqmndlq ipqalhmqme vqrklheqie
      121 vqrhlqlrie aqgkylqtvl kkaqetlagy ssssagaela raelsqlvsm vntgctsssf
      181 seltevggss iierkpmrgt tcsmgsslts sessgrndka plengnictq nvelslmdfl
      241 pekkplisca snqangkkrs vskvsdgvcv eqplakrlel peeetggclr ksgflelfdl
      301 nnqchndi
//
LOCUS       XP_016684004             268 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016684004
VERSION     XP_016684004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828515.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..268
                     /product="myb family transcription factor PHL8 isoform X4"
                     /calculated_mol_wt=29331
     Region          <2..25
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Region          60..106
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..268
                     /gene="LOC107902293"
                     /coded_by="XM_016828515.2:432..1238"
                     /db_xref="GeneID:107902293"
ORIGIN      
        1 mrvmgipglt lyhlkshlqk yrlgkslgnn tdykeiqssn gnfirdtsdg ihgqmneslq
       61 ipqalhmqme vqrklheqie vqrhlqlrie aqgkylqtvl kkaqetlagy ssssagaela
      121 raelsqlvsm vntgctsssf seltevggss iierkpmrgt tcsmgsslts sessgrndka
      181 plengnictq nvelslmdfl pekkplisca snqangkkrs vskvsdgvcv eqplakrlel
      241 peeetggclr ksgflelfdl nnqchndi
//
LOCUS       XP_016683981             231 aa            linear   PLN 06-AUG-2024
DEFINITION  extracellular ribonuclease LE [Gossypium hirsutum].
ACCESSION   XP_016683981
VERSION     XP_016683981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828492.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..231
                     /product="extracellular ribonuclease LE"
                     /calculated_mol_wt=25761
     Region          30..214
                     /region_name="Ribonuclease_T2"
                     /note="Ribonuclease T2 family; pfam00445"
                     /db_xref="CDD:459812"
     CDS             1..231
                     /gene="LOC107902274"
                     /coded_by="XM_016828492.2:257..952"
                     /db_xref="GeneID:107902274"
ORIGIN      
        1 mekemkfkci alinflvlqc lailgvskgf dffyfveqwp gsycdsdkfs ccypttgkpa
       61 adfsihglwp nyrngsypqn cdpnnpfnes eiadlissmr rnwpslacps ssgesfwshe
      121 wekhgtcses lldqhsyfqt altlrqqtni lqslksvgii pdggsyslan ikdaikngtg
      181 ytpwiecned ssgnsqlyqv ylcvdssgsn liecpvfskg kcvsemefpt f
//
LOCUS       XP_040941115             159 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 23, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941115
VERSION     XP_040941115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085181.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="nudix hydrolase 23, chloroplastic isoform X1"
                     /calculated_mol_wt=18447
     Region          <65..142
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     CDS             1..159
                     /gene="LOC107887230"
                     /coded_by="XM_041085181.1:1017..1496"
                     /db_xref="GeneID:107887230"
ORIGIN      
        1 micliqlvst lqelersley rvlrefnhvn pqtdeegkvf ldtrflpslm aiqifeligw
       61 hqhrtlptgy leiresaieg airetweeag aevevispfa qmdipfigqt yviflaklkk
      121 pqfspgpess ecclfeldni pffgifshfc yfefvyrrc
//
LOCUS       XP_040941116             139 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 23, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941116
VERSION     XP_040941116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085182.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="nudix hydrolase 23, chloroplastic isoform X2"
                     /calculated_mol_wt=16058
     Region          <45..122
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     CDS             1..139
                     /gene="LOC107887230"
                     /coded_by="XM_041085182.1:514..933"
                     /db_xref="GeneID:107887230"
ORIGIN      
        1 mvlrefnhvn pqtdeegkvf ldtrflpslm aiqifeligw hqhrtlptgy leiresaieg
       61 airetweeag aevevispfa qmdipfigqt yviflaklkk pqfspgpess ecclfeldni
      121 pffgifshfc yfefvyrrc
//
LOCUS       XP_016674587             436 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor CSA [Gossypium hirsutum].
ACCESSION   XP_016674587
VERSION     XP_016674587.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819098.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..436
                     /product="transcription factor CSA"
                     /calculated_mol_wt=48310
     Region          138..>242
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..436
                     /gene="LOC107893942"
                     /coded_by="XM_016819098.2:470..1780"
                     /db_xref="GeneID:107893942"
ORIGIN      
        1 mntpgyyltt ipsssssslg ssmgmvypdm gslslgqnyg ilgssvsstq dsygckvpem
       61 eneraswgfh fmgncktrsf eenhssdvve gqssdcsdgf gddsrtinln ailneenpnd
      121 ntvsgketds gqsklcargh wrpaedtklk elvalygpqn wnliaekleg rsgkscrlrw
      181 fnqldprinr rafteeeeer lmqahrlygn kwamiarlfp grtdnavknh whvimarkyr
      241 eqstayrrrk lsqsvyrkme etpnfvcrda atkaepppyc lnipnrrlgt ishyqfgtfn
      301 ganaggnvgs nvsphsssev prtgfitqqp pfdfipgvks ndmmgifsqt rswdrpidep
      361 qisgfyphqh hhpsyimamq qseflssqgl tdsaaptaqi sgsepsssvp gtkaatsshy
      421 etvpppfidf lgvgai
//
LOCUS       XP_016674595             343 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL30 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674595
VERSION     XP_016674595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..343
                     /product="agamous-like MADS-box protein AGL30 isoform X1"
                     /calculated_mol_wt=38529
     Region          2..82
                     /region_name="MADS_SRF_like"
                     /note="SRF-like/Type I subfamily of MADS (MCM1, Agamous,
                     Deficiens, and SRF (serum response factor) box family of
                     eukaryotic transcriptional regulators. Binds DNA and
                     exists as hetero- and homo-dimers. Differs from the
                     MEF-like/Type II subgroup mainly in...; cd00266"
                     /db_xref="CDD:238166"
     Site            order(3,5,19,22..24,27,30..31)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238166"
     Site            order(21,24,28..29,32,35,37..38,44,46,48,54,59,66..67,73,
                     76..77,81)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            order(29..30,33,37,53..56,58..61,68,74,77..78,81..82)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            60
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238166"
     CDS             1..343
                     /gene="LOC107893946"
                     /coded_by="XM_016819106.2:331..1362"
                     /db_xref="GeneID:107893946"
ORIGIN      
        1 mgrvklkikk lentngrqat yakrkhgimk kanelsilcd veiillmfsp tnkpsvcigk
       61 rssieeilek faqltpqera krklesleal kktfkkldhd vniheflgss tqtiedltnq
      121 arllqarlse ihrrlscwtd vdkinnvehl gqmedslkdy lnqirahken lgkqqllpie
      181 ctsqfqnemh vpfrmgieqq lqslawmpnn dsrhmalted pnlipprdve csasssfgsy
      241 sgyfgtpkss elsssgqeng ilndlqlggq cpffsydlsi lndhkfqpva emnfpetpvd
      301 yhvngvlagp ragydpnqgs wastsgpcav tmfdeplytg qln
//
LOCUS       XP_016674596             343 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL30 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674596
VERSION     XP_016674596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..343
                     /product="agamous-like MADS-box protein AGL30 isoform X1"
                     /calculated_mol_wt=38529
     Region          2..82
                     /region_name="MADS_SRF_like"
                     /note="SRF-like/Type I subfamily of MADS (MCM1, Agamous,
                     Deficiens, and SRF (serum response factor) box family of
                     eukaryotic transcriptional regulators. Binds DNA and
                     exists as hetero- and homo-dimers. Differs from the
                     MEF-like/Type II subgroup mainly in...; cd00266"
                     /db_xref="CDD:238166"
     Site            order(3,5,19,22..24,27,30..31)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238166"
     Site            order(21,24,28..29,32,35,37..38,44,46,48,54,59,66..67,73,
                     76..77,81)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            order(29..30,33,37,53..56,58..61,68,74,77..78,81..82)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            60
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238166"
     CDS             1..343
                     /gene="LOC107893946"
                     /coded_by="XM_016819107.2:171..1202"
                     /db_xref="GeneID:107893946"
ORIGIN      
        1 mgrvklkikk lentngrqat yakrkhgimk kanelsilcd veiillmfsp tnkpsvcigk
       61 rssieeilek faqltpqera krklesleal kktfkkldhd vniheflgss tqtiedltnq
      121 arllqarlse ihrrlscwtd vdkinnvehl gqmedslkdy lnqirahken lgkqqllpie
      181 ctsqfqnemh vpfrmgieqq lqslawmpnn dsrhmalted pnlipprdve csasssfgsy
      241 sgyfgtpkss elsssgqeng ilndlqlggq cpffsydlsi lndhkfqpva emnfpetpvd
      301 yhvngvlagp ragydpnqgs wastsgpcav tmfdeplytg qln
//
LOCUS       XP_016674597             342 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL30 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674597
VERSION     XP_016674597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819108.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="agamous-like MADS-box protein AGL30 isoform X2"
                     /calculated_mol_wt=38442
     Region          2..81
                     /region_name="MADS_SRF_like"
                     /note="SRF-like/Type I subfamily of MADS (MCM1, Agamous,
                     Deficiens, and SRF (serum response factor) box family of
                     eukaryotic transcriptional regulators. Binds DNA and
                     exists as hetero- and homo-dimers. Differs from the
                     MEF-like/Type II subgroup mainly in...; cd00266"
                     /db_xref="CDD:238166"
     Site            order(3,5,19,22..24,27,30..31)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238166"
     Site            order(21,24,28..29,32,35,37..38,44,46,48,54,58,65..66,72,
                     75..76,80)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            order(29..30,33,37,53..60,67,73,76..77,80..81)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238166"
     CDS             1..342
                     /gene="LOC107893946"
                     /coded_by="XM_016819108.2:545..1573"
                     /db_xref="GeneID:107893946"
ORIGIN      
        1 mgrvklkikk lentngrqat yakrkhgimk kanelsilcd veiillmfsp tnkpsvcigk
       61 rsieeilekf aqltpqerak rkleslealk ktfkkldhdv niheflgsst qtiedltnqa
      121 rllqarlsei hrrlscwtdv dkinnvehlg qmedslkdyl nqirahkenl gkqqllpiec
      181 tsqfqnemhv pfrmgieqql qslawmpnnd srhmaltedp nlipprdvec sasssfgsys
      241 gyfgtpksse lsssgqengi lndlqlggqc pffsydlsil ndhkfqpvae mnfpetpvdy
      301 hvngvlagpr agydpnqgsw astsgpcavt mfdeplytgq ln
//
LOCUS       XP_040941117             342 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL30 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941117
VERSION     XP_040941117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085183.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="agamous-like MADS-box protein AGL30 isoform X2"
                     /calculated_mol_wt=38442
     Region          2..81
                     /region_name="MADS_SRF_like"
                     /note="SRF-like/Type I subfamily of MADS (MCM1, Agamous,
                     Deficiens, and SRF (serum response factor) box family of
                     eukaryotic transcriptional regulators. Binds DNA and
                     exists as hetero- and homo-dimers. Differs from the
                     MEF-like/Type II subgroup mainly in...; cd00266"
                     /db_xref="CDD:238166"
     Site            order(3,5,19,22..24,27,30..31)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238166"
     Site            order(21,24,28..29,32,35,37..38,44,46,48,54,58,65..66,72,
                     75..76,80)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            order(29..30,33,37,53..60,67,73,76..77,80..81)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238166"
     CDS             1..342
                     /gene="LOC107893946"
                     /coded_by="XM_041085183.1:150..1178"
                     /db_xref="GeneID:107893946"
ORIGIN      
        1 mgrvklkikk lentngrqat yakrkhgimk kanelsilcd veiillmfsp tnkpsvcigk
       61 rsieeilekf aqltpqerak rkleslealk ktfkkldhdv niheflgsst qtiedltnqa
      121 rllqarlsei hrrlscwtdv dkinnvehlg qmedslkdyl nqirahkenl gkqqllpiec
      181 tsqfqnemhv pfrmgieqql qslawmpnnd srhmaltedp nlipprdvec sasssfgsys
      241 gyfgtpksse lsssgqengi lndlqlggqc pffsydlsil ndhkfqpvae mnfpetpvdy
      301 hvngvlagpr agydpnqgsw astsgpcavt mfdeplytgq ln
//
LOCUS       XP_016674217             248 aa            linear   PLN 06-AUG-2024
DEFINITION  expansin-A10 [Gossypium hirsutum].
ACCESSION   XP_016674217
VERSION     XP_016674217.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818728.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="expansin-A10"
                     /calculated_mol_wt=26126
     Region          1..247
                     /region_name="PLN00050"
                     /note="expansin A; Provisional"
                     /db_xref="CDD:165628"
     CDS             1..248
                     /gene="LOC107893671"
                     /coded_by="XM_016818728.2:464..1210"
                     /db_xref="GeneID:107893671"
ORIGIN      
        1 mafagilllg llsmvsavhg ygggwtnaha tfyggsdasg tmggacgygn lysqgygtnt
       61 aalstalfnn glscgscyei kcandgkwcl pgsivvtatn fcppnnalpn naggwcnppl
      121 qhfdlsqpvf qhiaqykagi vpvsyrrvpc rrkggirfti nghsyfnlvl isnvggagdv
      181 haaaikgsrt gwqpmsrnwg qnwqsnnyln gqslsfkvtt sdgrtvvsyn vapagwsfgq
      241 tftggqfr
//
LOCUS       XP_040941118             211 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear pore complex protein NUP93B-like [Gossypium hirsutum].
ACCESSION   XP_040941118
VERSION     XP_040941118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085184.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..211
                     /product="nuclear pore complex protein NUP93B-like"
                     /calculated_mol_wt=23055
     CDS             1..211
                     /gene="LOC121203315"
                     /coded_by="XM_041085184.1:363..998"
                     /db_xref="GeneID:121203315"
ORIGIN      
        1 mramaseqgm sswtdllhss tklleqaaps aqfpplqrnl dqlealskkl kaktlrtdap
       61 sqsiaatrll areginveql trdlksfelk ttfedvfpae atsveeylhg llpladkpvv
      121 ekkvsvyaev vrnlnnarqq glpfkvctis acgnfavlgt aggwierfnl qsgisqgsyv
      181 ddipfdslaf ssifvtlnlv safcfsffps m
//
LOCUS       XP_040941119             411 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941119
VERSION     XP_040941119.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085185.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..411
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45097
     Region          <266..313
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..411
                     /gene="LOC107893673"
                     /coded_by="XM_041085185.1:526..1761"
                     /db_xref="GeneID:107893673"
ORIGIN      
        1 mgphepywqt ntsfspppsr wdfhfqpdgl sysshdgsql yesstspnsk enrgwmrrnf
       61 lynhqystsd gaapflssps dlsqgpqwtp pviqeitldd yetattrdhv ggqapfaslv
      121 egtstnadsg vstssysdss esepmvkqcl sshhnissry cfmskpihpl sfpmetsttg
      181 vsdfavagls ndtampqrda hrwssasssn dvadisepfe svifgrscvp sngfkcglce
      241 rflsqrspws arrivrskdm pvaavlscgh tfhaecleqt tqkarirdpp cpvcakleeq
      301 nspenrvfsr lrnsisrlrs fsedgpsrtw scaqvgdcvq galhppqrst mlllnqsrmk
      361 knlfvkvnss kefpgklrks sspslqlfgg ksidqgavgc sktiagpsvk r
//
LOCUS       XP_016674220             304 aa            linear   PLN 06-AUG-2024
DEFINITION  methyltransferase-like protein 7B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674220
VERSION     XP_016674220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="methyltransferase-like protein 7B isoform X1"
                     /calculated_mol_wt=33120
     Region          119..234
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..304
                     /gene="LOC107893674"
                     /coded_by="XM_016818731.2:139..1053"
                     /db_xref="GeneID:107893674"
ORIGIN      
        1 mvklvhlhys psfhlqplns lktnqksrsa aaipskqlsl apsfcsccgr rhfieaatav
       61 flpispsksn astsqsdhyl dllnrihppr pdwyeefyas vmdtsmkpye akiagyksql
      121 leklkgkakr vleigigtgp nleyyagdne vqvfgldpnk kmekyaraaa tavglpsknf
      181 hfieavaeav plddssvdav vgtlvlcsvq dvnmalkevk rvlkpgglfl fiehvaaedg
      241 tslrlwqtlv dplqqavadg chltretgky isssgfssle lsmaslynap fslitphvyg
      301 vacn
//
LOCUS       XP_016674221             240 aa            linear   PLN 06-AUG-2024
DEFINITION  methyltransferase-like protein 7B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674221
VERSION     XP_016674221.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818732.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..240
                     /product="methyltransferase-like protein 7B isoform X2"
                     /calculated_mol_wt=26231
     Region          119..234
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..240
                     /gene="LOC107893674"
                     /coded_by="XM_016818732.2:78..800"
                     /db_xref="GeneID:107893674"
ORIGIN      
        1 mvklvhlhys psfhlqplns lktnqksrsa aaipskqlsl apsfcsccgr rhfieaatav
       61 flpispsksn astsqsdhyl dllnrihppr pdwyeefyas vmdtsmkpye akiagyksql
      121 leklkgkakr vleigigtgp nleyyagdne vqvfgldpnk kmekyaraaa tavglpsknf
      181 hfieavaeav plddssvdav vgtlvlcsvq dvnmalkevk rvlkpgglfl fiehvaaevl
//
LOCUS       XP_016674958             673 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein PFB0145c isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674958
VERSION     XP_016674958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..673
                     /product="uncharacterized protein PFB0145c isoform X1"
                     /calculated_mol_wt=77159
     Region          234..>549
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..673
                     /gene="LOC107894221"
                     /coded_by="XM_016819469.2:193..2214"
                     /db_xref="GeneID:107894221"
ORIGIN      
        1 mswirtavsr avevggnnnl rrtvwsvads vvqhagsavf ggarmihnri aarnmqnlri
       61 tvkrleevsv sckgveriql lrrwlvalke idrllndqnn nnddnknisi tinnsdttnd
      121 ndknnvdqfs fedikdspqk pslvyyydpe vgepmnfrev flysqalegm tlsmilevpn
      181 eeevslfmei lriciaggke vhetvmsnim nlavafsnyv eevlvkreel lqyaqaaikg
      241 lkinvglari daeacslkek lgemkalqns stqghedffq kqttamieal kealglvrly
      301 srlealllkk ktlsngdtpq lhaekvdklk vlseslsnst skaekrileq rvqkeeavsf
      361 riakanevsq qekeleaaiq elekqkdele aelkkvnasl iaarvrlrna reerehfdda
      421 snqillqlts keeeisrsia scrveadvvn awihfledtw flqttfheqk ekqvngeler
      481 ygeyfvnlvt hllsaykeql rpsisrirql veslsssers getakdesqk apnqrrnlee
      541 eylnleskfv stfsvvgsmk tqiyspnegt yrkkderlke lfddlesire efesmerptl
      601 elenpilnsh spstpksqks pwsrlkssln kkdqkklkfe leqdedeesl dyetdeivew
      661 eydafekdlk ptn
//
LOCUS       XP_040941120             556 aa            linear   PLN 06-AUG-2024
DEFINITION  centromere-associated protein E isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941120
VERSION     XP_040941120.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085186.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..556
                     /product="centromere-associated protein E isoform X2"
                     /calculated_mol_wt=64007
     Region          140..>432
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..556
                     /gene="LOC107894221"
                     /coded_by="XM_041085186.1:54..1724"
                     /db_xref="GeneID:107894221"
ORIGIN      
        1 mimtkttlis flsktsrilp kshlwsvyyy dpevgepmnf revflysqal egmtlsmile
       61 vpneeevslf meilriciag gkevhetvms nimnlavafs nyveevlvkr eellqyaqaa
      121 ikglkinvgl aridaeacsl keklgemkal qnsstqghed ffqkqttami ealkealglv
      181 rlysrleall lkkktlsngd tpqlhaekvd klkvlsesls nstskaekri leqrvqkeea
      241 vsfriakane vsqqekelea aiqelekqkd eleaelkkvn asliaarvrl rnareerehf
      301 ddasnqillq ltskeeeisr siascrvead vvnawihfle dtwflqttfh eqkekqvnge
      361 lerygeyfvn lvthllsayk eqlrpsisri rqlveslsss ersgetakde sqkapnqrrn
      421 leeeylnles kfvstfsvvg smktqiyspn egtyrkkder lkelfddles ireefesmer
      481 ptlelenpil nshspstpks qkspwsrlks slnkkdqkkl kfeleqdede esldyetdei
      541 veweydafek dlkptn
//
LOCUS       XP_040941121             551 aa            linear   PLN 06-AUG-2024
DEFINITION  RING finger protein PFF0165c isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941121
VERSION     XP_040941121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085187.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..551
                     /product="RING finger protein PFF0165c isoform X3"
                     /calculated_mol_wt=62787
     Region          257..>520
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..551
                     /gene="LOC107894221"
                     /coded_by="XM_041085187.1:193..1848"
                     /db_xref="GeneID:107894221"
ORIGIN      
        1 mswirtavsr avevggnnnl rrtvwsvads vvqhagsavf ggarmihnri aarnmqnlri
       61 tvkrleevsv sckgveriql lrrwlvalke idrllndqnn nnddnknisi tinnsdttnd
      121 ndknnvdqfs fedikdspqk pslvyyydpe vgepmnfrev flysqalegm tlsmilevpn
      181 eeevslfmei lriciaggke vhetvmsnim nlavafsnyv eevlvkreel lqyaqaaikg
      241 lkinvglari daeacslkek lgemkalqns stqghedffq kqttamieal kealglvrly
      301 srlealllkk ktlsngdtpq lhaekvdklk vlseslsnst skaekrileq rvqkeeavsf
      361 riakanevsq qekeleaaiq elekqkdele aelkkvnasl iaarvrlrna reerehfdda
      421 snqillqlts keeeisrsia scrveadvvn awihfledtw flqttfheqk ekqvngeler
      481 ygeyfvnlvt hllsaykeql rpsisrirql veslsssers getakdesqk apnqrrnlee
      541 eylnleskek r
//
LOCUS       XP_016674959             502 aa            linear   PLN 06-AUG-2024
DEFINITION  centromere-associated protein E isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016674959
VERSION     XP_016674959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..502
                     /product="centromere-associated protein E isoform X4"
                     /calculated_mol_wt=57702
     Region          <55..>241
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <153..>378
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..502
                     /gene="LOC107894221"
                     /coded_by="XM_016819470.2:239..1747"
                     /db_xref="GeneID:107894221"
ORIGIN      
        1 mtqilevpne eevslfmeil riciaggkev hetvmsnimn lavafsnyve evlvkreell
       61 qyaqaaikgl kinvglarid aeacslkekl gemkalqnss tqghedffqk qttamiealk
      121 ealglvrlys rlealllkkk tlsngdtpql haekvdklkv lseslsnsts kaekrileqr
      181 vqkeeavsfr iakanevsqq ekeleaaiqe lekqkdelea elkkvnasli aarvrlrnar
      241 eerehfddas nqillqltsk eeeisrsias crveadvvna wihfledtwf lqttfheqke
      301 kqvngelery geyfvnlvth llsaykeqlr psisrirqlv eslsssersg etakdesqka
      361 pnqrrnleee ylnleskfvs tfsvvgsmkt qiyspnegty rkkderlkel fddlesiree
      421 fesmerptle lenpilnshs pstpksqksp wsrlksslnk kdqkklkfel eqdedeesld
      481 yetdeivewe ydafekdlkp tn
//
LOCUS       XP_040941122             502 aa            linear   PLN 06-AUG-2024
DEFINITION  centromere-associated protein E isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941122
VERSION     XP_040941122.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085188.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..502
                     /product="centromere-associated protein E isoform X4"
                     /calculated_mol_wt=57702
     Region          <55..>241
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <153..>378
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..502
                     /gene="LOC107894221"
                     /coded_by="XM_041085188.1:146..1654"
                     /db_xref="GeneID:107894221"
ORIGIN      
        1 mtqilevpne eevslfmeil riciaggkev hetvmsnimn lavafsnyve evlvkreell
       61 qyaqaaikgl kinvglarid aeacslkekl gemkalqnss tqghedffqk qttamiealk
      121 ealglvrlys rlealllkkk tlsngdtpql haekvdklkv lseslsnsts kaekrileqr
      181 vqkeeavsfr iakanevsqq ekeleaaiqe lekqkdelea elkkvnasli aarvrlrnar
      241 eerehfddas nqillqltsk eeeisrsias crveadvvna wihfledtwf lqttfheqke
      301 kqvngelery geyfvnlvth llsaykeqlr psisrirqlv eslsssersg etakdesqka
      361 pnqrrnleee ylnleskfvs tfsvvgsmkt qiyspnegty rkkderlkel fddlesiree
      421 fesmerptle lenpilnshs pstpksqksp wsrlksslnk kdqkklkfel eqdedeesld
      481 yetdeivewe ydafekdlkp tn
//
LOCUS       XP_016675888             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675888
VERSION     XP_016675888.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675888.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18379
     CDS             1..159
                     /gene="LOC107895152"
                     /coded_by="XM_016820399.2:946..1425"
                     /db_xref="GeneID:107895152"
ORIGIN      
        1 mslavlckny mmrpflssrf qysmeplkrr filrkkpkrk mkstkymksf erlkidmkki
       61 skeqqsikeg qgqveakfna ieqeckqlcd eidlmircsa ntqirlglmf silkarqqad
      121 fgtaaqltgl lreivgrdde ykseesgvrt dvqgkhvvt
//
LOCUS       XP_016675889             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675889
VERSION     XP_016675889.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820400.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675889.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18379
     CDS             1..159
                     /gene="LOC107895152"
                     /coded_by="XM_016820400.2:459..938"
                     /db_xref="GeneID:107895152"
ORIGIN      
        1 mslavlckny mmrpflssrf qysmeplkrr filrkkpkrk mkstkymksf erlkidmkki
       61 skeqqsikeg qgqveakfna ieqeckqlcd eidlmircsa ntqirlglmf silkarqqad
      121 fgtaaqltgl lreivgrdde ykseesgvrt dvqgkhvvt
//
LOCUS       XP_016675886             988 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016675886
VERSION     XP_016675886.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820397.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675886.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..988
                     /product="ATP-dependent zinc metalloprotease FTSH 12,
                     chloroplastic"
                     /calculated_mol_wt=113154
     Region          340..945
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..988
                     /gene="LOC107895151"
                     /coded_by="XM_016820397.2:63..3029"
                     /db_xref="GeneID:107895151"
ORIGIN      
        1 mevsipcaqt pllfsssktp qtltfyqlpt rrrlkirass ssanpsgsgs nafswlrlgs
       61 qkfwskfges vkketgfdld eanvrvgelv grvnqglrkg egefnrlrte llpefvswnr
      121 wdrwkdlknw elkritalil yifvaiiscq klyavvrapq qdqerkqlte aymealipep
      181 spnnirkfkk glwrkttpkg lklkkfiegp ngmlihdsfy vgenawdddp esskenvkqi
      241 idsdarlnae ekeelrkelg isgevpdsmg twrdrlqawk eilrkeklse qldsinakyv
      301 vefdmkeven slrkdvvekv tetqgtralw iskrwwryrp klpytyflqk iessevaavv
      361 ftedlkrlyv tmkegfpley ivdipldphl feiisssgve vdllqkrqih yfmkvvialv
      421 pgllilwlir esamllhits krflykkynq lfdmayaenf ilpvgdsetk smykevvlgg
      481 dvwdlldelm iymgnpmqyy ekgvqfvrgv llsgppgtgk tlfartlake sglpfvfasg
      541 aeftdseksg aarinemfsi arrnapafvf vdeidaiagr harkdprrra tfealiaqld
      601 gekektgvdr fslrqavifi catnrpdeld lefvrlgrid rrlyiglpda kqrvqifgvh
      661 sagkllaedv nfeqlvfrtv gfsgadirnl vneaaimsvr kghskisqqd iidvldkqll
      721 egmgvlltee eqqkceasvs fekkrllavh eaghivlahl fprfdwhafs qllpggketa
      781 isvfypredm vdqgyttfgy mkmqmvvahg grcaervvfg dditdggrdd lekitkiare
      841 mvispqnarl glsqltkrvg lldrpdspdg elikyrwddp hvipsnmtle vselfsrelt
      901 ryieeteela inalkdnrhi ldmiakelle ksritgleve ekirghspvm fedfvkpfqi
      961 nldeegplph ndrlryqpld iypaplhr
//
LOCUS       XP_016675883             203 aa            linear   PLN 06-AUG-2024
DEFINITION  CBS domain-containing protein CBSX3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016675883
VERSION     XP_016675883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="CBS domain-containing protein CBSX3,
                     mitochondrial"
                     /calculated_mol_wt=22383
     Region          72..182
                     /region_name="CBS_pair_bac_euk"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains present in bacteria and
                     eukaryotes; cd04623"
                     /db_xref="CDD:341391"
     Region          72..133
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     Site            order(92,107,111..112,115,140,162..164,178)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341391"
     Region          140..182
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     CDS             1..203
                     /gene="LOC107895150"
                     /coded_by="XM_016820394.2:411..1022"
                     /db_xref="GeneID:107895150"
ORIGIN      
        1 mqravrafsv hgntvknail hrirvvnpvi rpvmfsrslt sasmeehgfe sttisdvlka
       61 kgkgadgswl wcttddsvyd avksmtqhnv galvvvkpge qksiagiite rdylrkiivh
      121 grsskstkvg dimteenkli tvtpetkvlq amqlmtdnri rhipvineke mvgmvsigdv
      181 vravvsehra eldrlnayiq ggy
//
LOCUS       XP_016675884             203 aa            linear   PLN 06-AUG-2024
DEFINITION  CBS domain-containing protein CBSX3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016675884
VERSION     XP_016675884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="CBS domain-containing protein CBSX3,
                     mitochondrial"
                     /calculated_mol_wt=22383
     Region          72..182
                     /region_name="CBS_pair_bac_euk"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains present in bacteria and
                     eukaryotes; cd04623"
                     /db_xref="CDD:341391"
     Region          72..133
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     Site            order(92,107,111..112,115,140,162..164,178)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341391"
     Region          140..182
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     CDS             1..203
                     /gene="LOC107895150"
                     /coded_by="XM_016820395.2:416..1027"
                     /db_xref="GeneID:107895150"
ORIGIN      
        1 mqravrafsv hgntvknail hrirvvnpvi rpvmfsrslt sasmeehgfe sttisdvlka
       61 kgkgadgswl wcttddsvyd avksmtqhnv galvvvkpge qksiagiite rdylrkiivh
      121 grsskstkvg dimteenkli tvtpetkvlq amqlmtdnri rhipvineke mvgmvsigdv
      181 vravvsehra eldrlnayiq ggy
//
LOCUS       XP_016675885             203 aa            linear   PLN 06-AUG-2024
DEFINITION  CBS domain-containing protein CBSX3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016675885
VERSION     XP_016675885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820396.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="CBS domain-containing protein CBSX3,
                     mitochondrial"
                     /calculated_mol_wt=22383
     Region          72..182
                     /region_name="CBS_pair_bac_euk"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains present in bacteria and
                     eukaryotes; cd04623"
                     /db_xref="CDD:341391"
     Region          72..133
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     Site            order(92,107,111..112,115,140,162..164,178)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341391"
     Region          140..182
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     CDS             1..203
                     /gene="LOC107895150"
                     /coded_by="XM_016820396.2:405..1016"
                     /db_xref="GeneID:107895150"
ORIGIN      
        1 mqravrafsv hgntvknail hrirvvnpvi rpvmfsrslt sasmeehgfe sttisdvlka
       61 kgkgadgswl wcttddsvyd avksmtqhnv galvvvkpge qksiagiite rdylrkiivh
      121 grsskstkvg dimteenkli tvtpetkvlq amqlmtdnri rhipvineke mvgmvsigdv
      181 vravvsehra eldrlnayiq ggy
//
LOCUS       XP_040941123             203 aa            linear   PLN 06-AUG-2024
DEFINITION  CBS domain-containing protein CBSX3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040941123
VERSION     XP_040941123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085189.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="CBS domain-containing protein CBSX3,
                     mitochondrial"
                     /calculated_mol_wt=22383
     Region          72..182
                     /region_name="CBS_pair_bac_euk"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains present in bacteria and
                     eukaryotes; cd04623"
                     /db_xref="CDD:341391"
     Region          72..133
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     Site            order(92,107,111..112,115,140,162..164,178)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341391"
     Region          140..182
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341391"
     CDS             1..203
                     /gene="LOC107895150"
                     /coded_by="XM_041085189.1:147..758"
                     /db_xref="GeneID:107895150"
ORIGIN      
        1 mqravrafsv hgntvknail hrirvvnpvi rpvmfsrslt sasmeehgfe sttisdvlka
       61 kgkgadgswl wcttddsvyd avksmtqhnv galvvvkpge qksiagiite rdylrkiivh
      121 grsskstkvg dimteenkli tvtpetkvlq amqlmtdnri rhipvineke mvgmvsigdv
      181 vravvsehra eldrlnayiq ggy
//
LOCUS       XP_016675877             443 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675877
VERSION     XP_016675877.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820388.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675877.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..443
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=51036
     Region          94..195
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Site            order(107,130..132,135,170,191)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381594"
     Region          <341..>412
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..443
                     /gene="LOC107895146"
                     /coded_by="XM_016820388.2:150..1481"
                     /db_xref="GeneID:107895146"
ORIGIN      
        1 mnplgqyiyf fenyrsqcrp atmvgfkywd dcvdpedlea mwqqpavrke widvgetqgq
       61 rvhlsrdpeg qpyltqtemr avaeivtsrh fdthidpemi ctiaelesnr qplaeqhdkk
      121 skvttvgimq islataesma keyqislyki egdpdilyrp fvnvyfgaty lkwlsnfenk
      181 vrteefmvra ymggtkkath kstlpywkry isvketftpr crkhsngptt qaptstalds
      241 snsddaclyw dsrvspedmr emwnnpeicn ewnksnqkrg kvlftldsek npclsrlelk
      301 avaeiivnny fstmgikpta lcalaemvsm rnvdgteert glmgidysta frlytevgfr
      361 dypidyeedl tkpfvsmyfg aayfawlsmy egserdlqfv iqayisgpen vnpegmcpew
      421 akfeqtlagf efrernggrc tvm
//
LOCUS       XP_016675876             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675876
VERSION     XP_016675876.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675876.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=48355
     Region          72..173
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Site            order(85,108..110,113,148,169)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381594"
     Region          <319..>390
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..421
                     /gene="LOC107895146"
                     /coded_by="XM_016820387.2:148..1413"
                     /db_xref="GeneID:107895146"
ORIGIN      
        1 mvgfkywddc vdpedleamw qqpavrkewi dvgetqgqrv hlsrdpegqp yltqtemrav
       61 aeivtsrhfd thidpemict iaelesnrqp laeqhdkksk vttvgimqis lataesmake
      121 yqislykieg dpdilyrpfv nvyfgatylk wlsnfenkvr teefmvraym ggtkkathks
      181 tlpywkryis vketftprcr khsngpttqa ptstaldssn sddaclywds rvspedmrem
      241 wnnpeicnew nksnqkrgkv lftldseknp clsrlelkav aeiivnnyfs tmgikptalc
      301 alaemvsmrn vdgteertgl mgidystafr lytevgfrdy pidyeedltk pfvsmyfgaa
      361 yfawlsmyeg serdlqfviq ayisgpenvn pegmcpewak feqtlagfef rernggrctv
      421 m
//
LOCUS       XP_016675878             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675878
VERSION     XP_016675878.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675878.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=48355
     Region          72..173
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Site            order(85,108..110,113,148,169)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381594"
     Region          <319..>390
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..421
                     /gene="LOC107895146"
                     /coded_by="XM_016820389.2:145..1410"
                     /db_xref="GeneID:107895146"
ORIGIN      
        1 mvgfkywddc vdpedleamw qqpavrkewi dvgetqgqrv hlsrdpegqp yltqtemrav
       61 aeivtsrhfd thidpemict iaelesnrqp laeqhdkksk vttvgimqis lataesmake
      121 yqislykieg dpdilyrpfv nvyfgatylk wlsnfenkvr teefmvraym ggtkkathks
      181 tlpywkryis vketftprcr khsngpttqa ptstaldssn sddaclywds rvspedmrem
      241 wnnpeicnew nksnqkrgkv lftldseknp clsrlelkav aeiivnnyfs tmgikptalc
      301 alaemvsmrn vdgteertgl mgidystafr lytevgfrdy pidyeedltk pfvsmyfgaa
      361 yfawlsmyeg serdlqfviq ayisgpenvn pegmcpewak feqtlagfef rernggrctv
      421 m
//
LOCUS       XP_016675879             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675879
VERSION     XP_016675879.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675879.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=48355
     Region          72..173
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Site            order(85,108..110,113,148,169)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381594"
     Region          <319..>390
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..421
                     /gene="LOC107895146"
                     /coded_by="XM_016820390.2:188..1453"
                     /db_xref="GeneID:107895146"
ORIGIN      
        1 mvgfkywddc vdpedleamw qqpavrkewi dvgetqgqrv hlsrdpegqp yltqtemrav
       61 aeivtsrhfd thidpemict iaelesnrqp laeqhdkksk vttvgimqis lataesmake
      121 yqislykieg dpdilyrpfv nvyfgatylk wlsnfenkvr teefmvraym ggtkkathks
      181 tlpywkryis vketftprcr khsngpttqa ptstaldssn sddaclywds rvspedmrem
      241 wnnpeicnew nksnqkrgkv lftldseknp clsrlelkav aeiivnnyfs tmgikptalc
      301 alaemvsmrn vdgteertgl mgidystafr lytevgfrdy pidyeedltk pfvsmyfgaa
      361 yfawlsmyeg serdlqfviq ayisgpenvn pegmcpewak feqtlagfef rernggrctv
      421 m
//
LOCUS       XP_016675880             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675880
VERSION     XP_016675880.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675880.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=48355
     Region          72..173
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Site            order(85,108..110,113,148,169)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381594"
     Region          <319..>390
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..421
                     /gene="LOC107895146"
                     /coded_by="XM_016820391.2:120..1385"
                     /db_xref="GeneID:107895146"
ORIGIN      
        1 mvgfkywddc vdpedleamw qqpavrkewi dvgetqgqrv hlsrdpegqp yltqtemrav
       61 aeivtsrhfd thidpemict iaelesnrqp laeqhdkksk vttvgimqis lataesmake
      121 yqislykieg dpdilyrpfv nvyfgatylk wlsnfenkvr teefmvraym ggtkkathks
      181 tlpywkryis vketftprcr khsngpttqa ptstaldssn sddaclywds rvspedmrem
      241 wnnpeicnew nksnqkrgkv lftldseknp clsrlelkav aeiivnnyfs tmgikptalc
      301 alaemvsmrn vdgteertgl mgidystafr lytevgfrdy pidyeedltk pfvsmyfgaa
      361 yfawlsmyeg serdlqfviq ayisgpenvn pegmcpewak feqtlagfef rernggrctv
      421 m
//
LOCUS       XP_016675873             494 aa            linear   PLN 06-AUG-2024
DEFINITION  histidinol dehydrogenase, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675873
VERSION     XP_016675873.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675873.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..494
                     /product="histidinol dehydrogenase, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=53350
     Region          55..485
                     /region_name="PLN02926"
                     /note="histidinol dehydrogenase"
                     /db_xref="CDD:215500"
     Site            order(110,180,182..183,191,212,239..240,242,263..265,
                     267..268,316)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(133..134,137..138,140,143..144,147..148,151..152,
                     159,161,165..169,172,174,186..190,258,273,277,304..305,
                     308..309,311..313,315..316,386,391,394..395,397..405,407,
                     409..410,412..416,418,420,430..431,433..437,439..440,
                     443..450,465..466,468..474)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119329"
     Site            order(188,190,291,316,381..382,411,415..416,422,469,471,
                     474)
                     /site_type="active"
                     /note="product binding site [active]"
                     /db_xref="CDD:119329"
     Site            order(190,291,313,316,381..382,411,415..416,422,469,471,
                     474)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(313,316,415,474)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:119329"
     Site            381..382
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:119329"
     CDS             1..494
                     /gene="LOC107895145"
                     /coded_by="XM_016820384.2:164..1648"
                     /db_xref="GeneID:107895145"
ORIGIN      
        1 mdsqllrlnp pnnlsikpfh spnfpsfaap sfirlsslsf psatvtgpac krircamksy
       61 klpelshvev eslkarprid fssifsviqp ivddvrsrgd aavrvytekf dkvelekive
      121 nvselpypel dptikeafdv aydniyafhl aqksveksve nmkgvrckrv arsigsvgly
      181 vpggtavlps talmlsvpaq iagcktvvla tppgqdgnic kevlycakka gvthilkagg
      241 aqaisamawg tescpkveki fgpgnqyvta akmilqnsea misidmpagp sevlviadkl
      301 aspvhiaadl lsqaehgpds qvvlviageg vdlkaieeei skqcnslprg dfaskalshs
      361 ftvfardmve aisfsnlyap ehliinvkda ekwegfvena gsvflgqwtp esvgdyasgt
      421 nhvlptygya rmyggvslds flkymtvqsl teeglrnlgp yvatmaeveg ldahkravtl
      481 rlqdieakhs ssvr
//
LOCUS       XP_016675874             494 aa            linear   PLN 06-AUG-2024
DEFINITION  histidinol dehydrogenase, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016675874
VERSION     XP_016675874.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675874.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..494
                     /product="histidinol dehydrogenase, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=53265
     Region          55..485
                     /region_name="PLN02926"
                     /note="histidinol dehydrogenase"
                     /db_xref="CDD:215500"
     Site            order(110,180,182..183,191,212,239..240,242,263..265,
                     267..268,316)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(133..134,137..138,140,143..144,147..148,151..152,
                     159,161,165..169,172,174,186..190,258,273,277,304..305,
                     308..309,311..313,315..316,386,391,394..395,397..405,407,
                     409..410,412..416,418,420,430..431,433..437,439..440,
                     443..450,465..466,468..474)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119329"
     Site            order(188,190,291,316,381..382,411,415..416,422,469,471,
                     474)
                     /site_type="active"
                     /note="product binding site [active]"
                     /db_xref="CDD:119329"
     Site            order(190,291,313,316,381..382,411,415..416,422,469,471,
                     474)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(313,316,415,474)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:119329"
     Site            381..382
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:119329"
     CDS             1..494
                     /gene="LOC107895145"
                     /coded_by="XM_016820385.2:155..1639"
                     /db_xref="GeneID:107895145"
ORIGIN      
        1 mdsqllrlnp pnnlsikpfh spnfpsfaap sfirlsslsf psatvtgpac krircamksy
       61 klpelshvev eslkarprid fssifsviqp ivddvrsrgd aavrvytekf dkvelekive
      121 nvselpypel dptikeafdv aydniyafhl aqksveksve nmkgvrckrv arsigsvgly
      181 vpggtavlps talmlsvpaq iagcktvvla tppgqdgnic kevlycakka gvthilkagg
      241 aqaisamawg tescpkveki fgpgnqyvta akmilqnsea misidmpagp sevlviadkl
      301 aspvhiaadl lsqaehgpds qvvlviageg vdlkaieeei skqcnslprg dfaskalshs
      361 ftvfardmve aisfsnlyap ehliinvkda ekwegfvena gsvflgqwtp esvgdyasgt
      421 nhvlptygya rmyggvslds flkymtvqsl teeglrnlgp yvatmaeveg ldahkravtl
      481 rlqdieakhs ssav
//
LOCUS       XP_040941124             438 aa            linear   PLN 06-AUG-2024
DEFINITION  histidinol dehydrogenase, chloroplastic isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941124
VERSION     XP_040941124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085190.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..438
                     /product="histidinol dehydrogenase, chloroplastic isoform
                     X3"
                     /calculated_mol_wt=47181
     Region          1..429
                     /region_name="PLN02926"
                     /note="histidinol dehydrogenase"
                     /db_xref="CDD:215500"
     Site            order(54,124,126..127,135,156,183..184,186,207..209,
                     211..212,260)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(77..78,81..82,84,87..88,91..92,95..96,103,105,
                     109..113,116,118,130..134,202,217,221,248..249,252..253,
                     255..257,259..260,330,335,338..339,341..349,351,353..354,
                     356..360,362,364,374..375,377..381,383..384,387..394,
                     409..410,412..418)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119329"
     Site            order(132,134,235,260,325..326,355,359..360,366,413,415,
                     418)
                     /site_type="active"
                     /note="product binding site [active]"
                     /db_xref="CDD:119329"
     Site            order(134,235,257,260,325..326,355,359..360,366,413,415,
                     418)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(257,260,359,418)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:119329"
     Site            325..326
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:119329"
     CDS             1..438
                     /gene="LOC107895145"
                     /coded_by="XM_041085190.1:166..1482"
                     /db_xref="GeneID:107895145"
ORIGIN      
        1 mksyklpels hveveslkar pridfssifs viqpivddvr srgdaavrvy tekfdkvele
       61 kivenvselp ypeldptike afdvaydniy afhlaqksve ksvenmkgvr ckrvarsigs
      121 vglyvpggta vlpstalmls vpaqiagckt vvlatppgqd gnickevlyc akkagvthil
      181 kaggaqaisa mawgtescpk vekifgpgnq yvtaakmilq nseamisidm pagpsevlvi
      241 adklaspvhi aadllsqaeh gpdsqvvlvi agegvdlkai eeeiskqcns lprgdfaska
      301 lshsftvfar dmveaisfsn lyapehliin vkdaekwegf venagsvflg qwtpesvgdy
      361 asgtnhvlpt ygyarmyggv sldsflkymt vqslteeglr nlgpyvatma evegldahkr
      421 avtlrlqdie akhsssav
//
LOCUS       XP_040941125             403 aa            linear   PLN 06-AUG-2024
DEFINITION  histidinol dehydrogenase, chloroplastic isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941125
VERSION     XP_040941125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085191.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..403
                     /product="histidinol dehydrogenase, chloroplastic isoform
                     X4"
                     /calculated_mol_wt=43308
     Region          15..394
                     /region_name="PLN02926"
                     /note="histidinol dehydrogenase"
                     /db_xref="CDD:215500"
     Site            order(19,89,91..92,100,121,148..149,151,172..174,176..177,
                     225)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(42..43,46..47,49,52..53,56..57,60..61,68,70,74..78,
                     81,83,95..99,167,182,186,213..214,217..218,220..222,
                     224..225,295,300,303..304,306..314,316,318..319,321..325,
                     327,329,339..340,342..346,348..349,352..359,374..375,
                     377..383)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119329"
     Site            order(97,99,200,225,290..291,320,324..325,331,378,380,383)
                     /site_type="active"
                     /note="product binding site [active]"
                     /db_xref="CDD:119329"
     Site            order(99,200,222,225,290..291,320,324..325,331,378,380,
                     383)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119329"
     Site            order(222,225,324,383)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:119329"
     Site            290..291
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:119329"
     CDS             1..403
                     /gene="LOC107895145"
                     /coded_by="XM_041085191.1:143..1354"
                     /db_xref="GeneID:107895145"
ORIGIN      
        1 mmsaaeamlq lecrytekfd kvelekiven vselpypeld ptikeafdva ydniyafhla
       61 qksveksven mkgvrckrva rsigsvglyv pggtavlpst almlsvpaqi agcktvvlat
      121 ppgqdgnick evlycakkag vthilkagga qaisamawgt escpkvekif gpgnqyvtaa
      181 kmilqnseam isidmpagps evlviadkla spvhiaadll sqaehgpdsq vvlviagegv
      241 dlkaieeeis kqcnslprgd faskalshsf tvfardmvea isfsnlyape hliinvkdae
      301 kwegfvenag svflgqwtpe svgdyasgtn hvlptygyar myggvsldsf lkymtvqslt
      361 eeglrnlgpy vatmaevegl dahkravtlr lqdieakhss svr
//
LOCUS       XP_016675132             424 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200-like [Gossypium hirsutum].
ACCESSION   XP_016675132
VERSION     XP_016675132.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675132.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..424
                     /product="UPF0481 protein At3g47200-like"
                     /calculated_mol_wt=49220
     Region          40..398
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..424
                     /gene="LOC107894361"
                     /coded_by="XM_016819643.2:1..1275"
                     /db_xref="GeneID:107894361"
ORIGIN      
        1 mamdlqspnn divqqrtmas meekllksrq rrshpephti cpfpdslikv hdeirwpqlt
       61 sfgpcrhrth pflpfekhkw dlldefltrt krnwqfyyer lmnsidqikr cyseevdkpa
      121 ddhqlvkmml ldgsfmvelf llyeegkdft ppppssvqtl iadllklenq lpffvleilf
      181 elstvgppir slsylalrfl sqafckspem vkaqvrkpkh lldlfrrsll patnldedsh
      241 lskhdrpmhp iqsvkhlrta gisvrqrtak slleidfkkf qipplalkip plaiddftna
      301 ilvncvaveq cftdeskhft ayvcfmsclm kqpedvgylr sadiingfsr degsfinmln
      361 gigtkvsstl recylckqfr eihcyynsyw asisrsffqy nhimlycsll qivvsivgwr
      421 vsgn
//
LOCUS       XP_040941126             423 aa            linear   PLN 06-AUG-2024
DEFINITION  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941126
VERSION     XP_040941126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085192.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..423
                     /product="glyceraldehyde-3-phosphate dehydrogenase GAPCP1,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=45031
     Region          1..422
                     /region_name="PLN02272"
                     /note="glyceraldehyde-3-phosphate dehydrogenase"
                     /db_xref="CDD:177912"
     CDS             1..423
                     /gene="LOC107895144"
                     /coded_by="XM_041085192.1:205..1476"
                     /db_xref="GeneID:107895144"
ORIGIN      
        1 mafsflirst aaasfhieas dlslspsdrl kvssigfsgn lnsifgaals ttsvslqkcn
       61 srsiqpikat aakippaapk srksgktkig ingfgrigrl vlrvanlrdd ievvavndpf
      121 idakymtymf kydsthggfk gkirvvdest leingkqihv vnkrdpaeip wgkfgaefvv
      181 essgifttvs kasahmkgga kkvvisapst dapmfvvgvn eksykpsmnv vsnascttnc
      241 laplakvvhe efgvieglmt tvhattatqk tvdgpsmkdw rggrgagqni ipsstgaakt
      301 vgkvlpelng kltgmafrvp tpnvsvvdlt crlqksasye tvkaaikras egplkgilgy
      361 tdedvvssdf vgdprssifd akagiglsns fmklvswyen ewgysnrvvn liqhmelvgs
      421 tpk
//
LOCUS       XP_040941127             350 aa            linear   PLN 06-AUG-2024
DEFINITION  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941127
VERSION     XP_040941127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085193.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..350
                     /product="glyceraldehyde-3-phosphate dehydrogenase GAPCP2,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=37776
     Region          <11..349
                     /region_name="PLN02272"
                     /note="glyceraldehyde-3-phosphate dehydrogenase"
                     /db_xref="CDD:177912"
     CDS             1..350
                     /gene="LOC107895144"
                     /coded_by="XM_041085193.1:31..1083"
                     /db_xref="GeneID:107895144"
ORIGIN      
        1 mhnwnsvsay tfvpinfkis fgrigrlvlr vanlrddiev vavndpfida kymtymfkyd
       61 sthggfkgki rvvdestlei ngkqihvvnk rdpaeipwgk fgaefvvess gifttvskas
      121 ahmkggakkv visapstdap mfvvgvneks ykpsmnvvsn ascttnclap lakvvheefg
      181 vieglmttvh attatqktvd gpsmkdwrgg rgagqniips stgaaktvgk vlpelngklt
      241 gmafrvptpn vsvvdltcrl qksasyetvk aaikrasegp lkgilgytde dvvssdfvgd
      301 prssifdaka giglsnsfmk lvswyenewg ysnrvvnliq hmelvgstpk
//
LOCUS       XP_016675871             143 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S19-3 [Gossypium hirsutum].
ACCESSION   XP_016675871
VERSION     XP_016675871.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820382.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675871.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..143
                     /product="40S ribosomal protein S19-3"
                     /calculated_mol_wt=15850
     Region          6..140
                     /region_name="Ribosomal_S19e"
                     /note="Ribosomal protein S19e; pfam01090"
                     /db_xref="CDD:460058"
     CDS             1..143
                     /gene="LOC107895143"
                     /coded_by="XM_016820382.2:120..551"
                     /db_xref="GeneID:107895143"
ORIGIN      
        1 meaartvkdv sphefvkaya ahlkrsgkie lppwtdivkt gklkelppyd pdwyyvraas
       61 markiylrgv lgvgafrriy ggakrngsrp rhfckssgsv arhilqqlqd vniididpkg
      121 grritsngqr dldqvagria vai
//
LOCUS       XP_016675467             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675467
VERSION     XP_016675467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819978.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16355
     CDS             1..150
                     /gene="LOC107894742"
                     /coded_by="XM_016819978.2:195..647"
                     /db_xref="GeneID:107894742"
ORIGIN      
        1 masssgsdai rydlnsdsrv flcrhcenhv lssnnfldvi vtpgtsrilc repvnvrgql
       61 pampfshckl sirqppgwpa nafypspavn vlckqcnkyl getlitggvg qvptgpsmeq
      121 rfmlhpgell fwdgsrlvga eslkpvrskk
//
LOCUS       XP_040941128             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941128
VERSION     XP_040941128.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085194.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16355
     CDS             1..150
                     /gene="LOC107894742"
                     /coded_by="XM_041085194.1:190..642"
                     /db_xref="GeneID:107894742"
ORIGIN      
        1 masssgsdai rydlnsdsrv flcrhcenhv lssnnfldvi vtpgtsrilc repvnvrgql
       61 pampfshckl sirqppgwpa nafypspavn vlckqcnkyl getlitggvg qvptgpsmeq
      121 rfmlhpgell fwdgsrlvga eslkpvrskk
//
LOCUS       XP_040941129             413 aa            linear   PLN 06-AUG-2024
DEFINITION  metal tolerance protein 9 [Gossypium hirsutum].
ACCESSION   XP_040941129
VERSION     XP_040941129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085195.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..413
                     /product="metal tolerance protein 9"
                     /calculated_mol_wt=47095
     Region          120..394
                     /region_name="FieF"
                     /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump
                     [Inorganic ion transport and metabolism]; COG0053"
                     /db_xref="CDD:439823"
     CDS             1..413
                     /gene="LOC121212461"
                     /coded_by="XM_041085195.1:98..1339"
                     /db_xref="GeneID:121212461"
ORIGIN      
        1 mangvkyann lrtdssdyra ellspapnge nhvtmaseqs wrlnmdkfhl perrkessyf
       61 slgyfikalk rhrklsqyyk rqeellkgfn evdafnelgi lpgslseeem kqvarserva
      121 iyasnvanlv lflakvyasv msrslavias tldslldlls gfilwftaya mrkpnqyryp
      181 igknrmqpvg ivvfasvmat lglqilfesg reliikaqpe rdpvkekwmi gimvsvtlvk
      241 lvlmlycrrf qneivkayaq dhffdvitns iglgtavlai kfywwidplg ailialytmg
      301 nwantvmdnv waligktapp eylakltyli wnhheeirhi etvraytfgs qyfvevhivl
      361 pqdmtlpqsh nigqtledkl eqlpeveraf vhvdfdtihp pehkpkgtps ssp
//
LOCUS       XP_016675870             407 aa            linear   PLN 06-AUG-2024
DEFINITION  proton pump-interactor BIP131 [Gossypium hirsutum].
ACCESSION   XP_016675870
VERSION     XP_016675870.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820381.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675870.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..407
                     /product="proton pump-interactor BIP131"
                     /calculated_mol_wt=47616
     CDS             1..407
                     /gene="LOC107895142"
                     /coded_by="XM_016820381.2:134..1357"
                     /db_xref="GeneID:107895142"
ORIGIN      
        1 mskepmegnw mstpaadede gtkfngeggs rkvhqfyfvk fwpykdpekd sklewsrqqc
       61 eqldqekkli vddkmkeims rgeniysele rkryrsavlg agvewktlvv gflqasmdkl
      121 nvtasssskq paihsprtlv thgsnnlake eqlskktpsa hqpqflmssl rneigrayfw
      181 ysqsknrkkf eqilkeikei edrhdkakad aaakgniwnp lsskkaiedq irllnkipde
      241 lkpercevme eikclenelk alkkeenivs ekfqrlinrk sdlcdfvlai rkeedeanan
      301 yneyvslirn vnelarnkdv kaleqlsskq vddfmrqwkd sqsfreryek tvlwslhyre
      361 msrdgrirnd heqpilenge ihqlflhlvs tfltlfllld vrnkmlh
//
LOCUS       XP_016674056             518 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: organic cation/carnitine transporter 3
            [Gossypium hirsutum].
ACCESSION   XP_016674056
VERSION     XP_016674056.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818567.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674056.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..518
                     /product="LOW QUALITY PROTEIN: organic cation/carnitine
                     transporter 3"
                     /calculated_mol_wt=56372
     Region          84..488
                     /region_name="MFS_OCT_plant"
                     /note="Plant organic cation/carnitine transporters of the
                     Major Facilitator Superfamily of transporters; cd17378"
                     /db_xref="CDD:340936"
     Site            order(101..102,105..106,109,133,184..185,187..189,192,208,
                     211..212,215,329,332..333,336..338,341,361,365,416..417,
                     421,425,441,444..445,448..449,452)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340936"
     CDS             1..518
                     /gene="LOC107893532"
                     /coded_by="XM_016818567.2:69..1625"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107893532"
ORIGIN      
        1 madstpllsh cdkpaepkrp prsldetieg cigdfgwwqf lqailvslaw vfdaqqtfis
       61 vftdaepswh ctqggdesvc nslsnicelp knswswdwps qtsiisewgl ecapsfitgl
      121 pasaffmgcl agglalatla dstlgrknml lfsclmmsfs siftvfspni wiysvlrfin
      181 gfgratvgtc alvlstelvg krwrgqvgvv gffcftlgfl slpvmayvnr gsswrtlylw
      241 isvptilyci lvhflvhesp rwlfvrgrke eavltlksma qanqspitms fsnvlieqes
      301 wnvdiyssik illnkrwaak rlaavmvggf gigmvyygmp lglgnlsvnl ylgvtlnals
      361 elpaslitff ligkmkrkds llgftilsgv csvlcvvvgk vspslqiame lisffsacsa
      421 fnmsliytle lfptcvrnsa ismvrqalvf ggxfspllva agrtnnfisf gvfglvigic
      481 glplvglpet rggticdtmd eeehkqneka aaaiatla
//
LOCUS       XP_040941130             347 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor IPN2 [Gossypium hirsutum].
ACCESSION   XP_040941130
VERSION     XP_040941130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085196.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..347
                     /product="myb family transcription factor IPN2"
                     /calculated_mol_wt=38318
     Region          32..88
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          121..160
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..347
                     /gene="LOC121212463"
                     /coded_by="XM_041085196.1:316..1359"
                     /db_xref="GeneID:121212463"
ORIGIN      
        1 mfqpkkpttm nshdrpmcvq gdsglvlttd pkprlrwtve lherfvdavt qlggpdkatp
       61 ktimrvmgvk gltlyhlksh lqkfrlgkqp hkeindhsmk ddlqrsaass sgmmarsmne
      121 mqmevqrrlh eqlevqrhlq lrieaqgkym qsilekacqt lagenmasgg ykgmgnqgvp
      181 digamkdfgp lnfppfqdln iyggdqldlp hnmdrplldg fisnndntcl gkkrpspysg
      241 sgkspliwsd dlrlqdlgta psclgpqddp fktdqiqlap psteldsise iydakpvlsg
      301 dgigekkfea spklerpspr raalqtermn pvinsgsvaq grnspfg
//
LOCUS       XP_040941132             317 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 86 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941132
VERSION     XP_040941132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085198.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..317
                     /product="NAC domain-containing protein 86 isoform X1"
                     /calculated_mol_wt=35891
     Region          7..133
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..317
                     /gene="LOC121202829"
                     /coded_by="XM_041085198.1:496..1449"
                     /db_xref="GeneID:121202829"
ORIGIN      
        1 mapmtlppgf rfhptdeelv ayyldrkisg rtieleiipe vdlykcepwd lpdksflpsk
       61 dmewyfyspr dkkypngsrt nratrggywk atgkdravqt skavvgmkkt lvyyrgraph
      121 girtnwvmhe yrllhsaspt apsslkdsys lcrifkkniq ipktkgaave nnqsfgdeis
      181 rgreaevede nfntsssdvt qgtpnetgma deyqppftsd eanssanlss lgpdfssdlf
      241 qipsytnlhy qapypplele dfpqiniise tkaskaeiid eymmydkckd ymngsleeif
      301 slcasqdnsm pplsmhd
//
LOCUS       XP_040941133             268 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 86 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941133
VERSION     XP_040941133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085199.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..268
                     /product="NAC domain-containing protein 86 isoform X2"
                     /calculated_mol_wt=30142
     Region          7..133
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..268
                     /gene="LOC121202829"
                     /coded_by="XM_041085199.1:565..1371"
                     /db_xref="GeneID:121202829"
ORIGIN      
        1 mapmtlppgf rfhptdeelv ayyldrkisg rtieleiipe vdlykcepwd lpdksflpsk
       61 dmewyfyspr dkkypngsrt nratrggywk atgkdravqt skavvgmkkt lvyyrgraph
      121 girtnwvmhe yrllhsaspt apsslkdsys lcrifkkniq ipktkgaave nnqsfgdeis
      181 rgreaevede nfntsssdvt qgtpnetgma deyqppftsd eanssanlss lgpdfssdlf
      241 qqhsallgaf inhqrlqnhs vslphpnt
//
LOCUS       XP_040941134             383 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RGLG4 [Gossypium hirsutum].
ACCESSION   XP_040941134
VERSION     XP_040941134.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085200.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="E3 ubiquitin-protein ligase RGLG4"
                     /calculated_mol_wt=41998
     Region          32..282
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(67,157,185)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          339..382
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(339,342,353,355,358,361,368,371)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..383
                     /gene="LOC121212465"
                     /coded_by="XM_041085200.1:258..1409"
                     /db_xref="GeneID:121212465"
ORIGIN      
        1 maaarggest apinepsrlq rkqstkqkyg fipdhfstfd qvtqalreag lessnlilgi
       61 dftksnewtg kvsfknrslh aigdtpnpye kaisiigktl apfdednlip cfgfgdatth
      121 dtevfsfhnd rsschgfeev lacyrkivpn lrlagptsya pvidvavdiv ensggqfhvl
      181 viiadgqvtr svytsdrels pqeestinsi vnaslyplsi vlvgvgdgpw ddmkkfddki
      241 parefdnfqf vnftgimskn ispeeketaf alaalmeipl qykavtelgf lgqrtgkakk
      301 vvprpppvsy rrptpapper vpsnvssssp addqtqatcp icltntkdla fncghttcre
      361 cgskvsncpi crqritnrlr lft
//
LOCUS       XP_040941135             383 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RGLG4 [Gossypium hirsutum].
ACCESSION   XP_040941135
VERSION     XP_040941135.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085201.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="E3 ubiquitin-protein ligase RGLG4"
                     /calculated_mol_wt=41998
     Region          32..282
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(67,157,185)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          339..382
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(339,342,353,355,358,361,368,371)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..383
                     /gene="LOC121212465"
                     /coded_by="XM_041085201.1:253..1404"
                     /db_xref="GeneID:121212465"
ORIGIN      
        1 maaarggest apinepsrlq rkqstkqkyg fipdhfstfd qvtqalreag lessnlilgi
       61 dftksnewtg kvsfknrslh aigdtpnpye kaisiigktl apfdednlip cfgfgdatth
      121 dtevfsfhnd rsschgfeev lacyrkivpn lrlagptsya pvidvavdiv ensggqfhvl
      181 viiadgqvtr svytsdrels pqeestinsi vnaslyplsi vlvgvgdgpw ddmkkfddki
      241 parefdnfqf vnftgimskn ispeeketaf alaalmeipl qykavtelgf lgqrtgkakk
      301 vvprpppvsy rrptpapper vpsnvssssp addqtqatcp icltntkdla fncghttcre
      361 cgskvsncpi crqritnrlr lft
//
LOCUS       XP_016674062            1256 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FORGETTER 1 [Gossypium hirsutum].
ACCESSION   XP_016674062
VERSION     XP_016674062.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818573.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674062.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1256
                     /product="protein FORGETTER 1"
                     /calculated_mol_wt=139018
     Region          180..478
                     /region_name="AAA_34"
                     /note="P-loop containing NTP hydrolase pore-1; pfam13872"
                     /db_xref="CDD:464010"
     Region          657..705
                     /region_name="PHD"
                     /note="PHD-finger; pfam00628"
                     /db_xref="CDD:425785"
     Site            order(657,670..673,677,697)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          746..1035
                     /region_name="Helicase_C_4"
                     /note="C-terminal domain on Strawberry notch homolog;
                     pfam13871"
                     /db_xref="CDD:464009"
     CDS             1..1256
                     /gene="LOC107893540"
                     /coded_by="XM_016818573.2:271..4041"
                     /db_xref="GeneID:107893540"
ORIGIN      
        1 mpqpsipplp laqqpppapa agpaapgvqv rcagcrmils vgpgvtefvc ptcqlpqmlp
       61 pelmtrarin npppnqssvp ahgidptkiq lpcanckail nvpyglarfs cpqcgvdlav
      121 dlnkmkqlfp ppqprpplpp eevnevaiev ereedeggpv getftdyrpp klsigpphpd
      181 pivetsslsa vqppeptydl rikddlensk alsclqietl vyacqrhlqh lpsgsragff
      241 vgdgagvgkg rtiagliwen whharrkaiw isvgsdlkfd arrdlddvga acievhalnk
      301 lpyskldsks vginqgvvfl tyssliasse kgrsrlqqlv qwcgsgfdgl iifdechkak
      361 nlvpeagsqp trtgeavlei qarlpearvi ycsatgasep rnmgymirlg lwgagtsfpd
      421 fqsflvalek ggvgalelva mdmkargmyv crtlsykgve fevieaplea emeamykkaa
      481 elwaelrvel lsasafhsne kpnpsqlwrm ywsshqrffr hmcmsakvpa tvrlakqalk
      541 edkcvviglq stgearteea vtkygleldd fvsgprelll kfvdenyplp ekpeplqgde
      601 svkelqrkrh satpgvslkg rvrkvakwkp asdgesdees dtdsgheste sddefqicei
      661 csseeerkkl lqcsccgklv hpaclvppit dlvpekwscy sckektdeym qarrayieel
      721 lkryeqalqr kskildiirs ldlpnnpldd iidqlggpdk vaemtgrrgm lvrassgkgv
      781 tyqarntkev tmemvnmhek qlfmdgkklv aiiseagsag vslqadrral nqkrrvhltl
      841 elpwsadrai qqfgrthrsn qasapeyrll ftnlggerrf asivakrles lgaltqgdrr
      901 agpslsayny dssygkkalm vmyrgimeqd nlpvvppgcs sekpetiqdf itkakaalvs
      961 vgivrdtvlg ngkdngkfsg rivdsdmhdv grflnrllgl ppdiqnrlfe lfisildvli
     1021 qnariegnld sgivdmkani ielqgnpktv hvdqmsgast vlftftldrg itwesastml
     1081 dekkkdglgs andgfyeskr ewlgrrhfvl afessasgmf kivrpavges vremtlaelk
     1141 nkyrrislle karrgwedey evsskqcmhg pncklgnfct vgrriqevnv lgglilpvwg
     1201 tiekalskqa rlshrrlrvv rlettadnwr ivgllvpnaa vetvlqdltw vqdied
//
LOCUS       XP_040941136             461 aa            linear   PLN 06-AUG-2024
DEFINITION  metacaspase-4 [Gossypium hirsutum].
ACCESSION   XP_040941136
VERSION     XP_040941136.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085202.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..461
                     /product="metacaspase-4"
                     /calculated_mol_wt=50737
     Region          45..>211
                     /region_name="Peptidase_C14"
                     /note="Caspase domain; pfam00656"
                     /db_xref="CDD:425803"
     CDS             1..461
                     /gene="LOC107893541"
                     /coded_by="XM_041085202.1:16..1401"
                     /db_xref="GeneID:107893541"
ORIGIN      
        1 minnsntlif anqesiisly krqklfseif hllikakttr iqwgkkavli ginypgtkae
       61 lkgcindvkr mykclteryg fseeditvli dtdnsydqpt gknirralnd lvrsaepgdf
      121 lfvhysghgt rlpaetgddd dtgydecivp cdmnlitddd frelvdkvpk gsrisivsds
      181 chsgglidea keqigdsskp qdsesesgsg gfrsflhhtv qdafesrgih vpsrlrhrdh
      241 hhdkeevddr gvnedyddsg yvksrslpls tliemlkqkt gkddidvgkl rptlfdmfge
      301 daspkvkkfm niimtklqgs gddgegggfm gkvgnlalqf lkqkldddeg ygkpaletev
      361 sskqeayaga gkhslpdsgi lisgcqtdqt sadaspsgna skaygalsna iqtiiadsdg
      421 sitnkelvlk arqmlkkqgf tqqpglyccd hhvrapfvce y
//
LOCUS       XP_016674064             977 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific demethylase JMJ25 [Gossypium hirsutum].
ACCESSION   XP_016674064
VERSION     XP_016674064.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818575.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674064.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..977
                     /product="lysine-specific demethylase JMJ25"
                     /calculated_mol_wt=112296
     Region          8..43
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     Region          143..>199
                     /region_name="zf-4CXXC_R1"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; pfam10497"
                     /db_xref="CDD:463117"
     Region          575..627
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          827..925
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..977
                     /gene="LOC107893542"
                     /coded_by="XM_016818575.2:141..3074"
                     /db_xref="GeneID:107893542"
ORIGIN      
        1 mvpfiappee lqcarngrkw rcsrwrihge sycefhflhq knrckqnpak trphkkkrkr
       61 tnqnerveee kgisvldkdy gngggvepws rrtrnakfaa ekqengpksk gkkdgngdks
      121 esfsrtgnvs saekkevagg gychqchqlk srvqfcrkcq rkrycdscik kwyprfpeka
      181 iagscpfcrk icncksclrs dqlmkdvkns glplnkeeri khfkylisll ypflkqfnee
      241 qmkeieleak iqglrsseme llravpsdye rlycnnckts ivdlhrvcpk csyelcltcc
      301 weirgkclrs gdkmvqryld rgraylhgge plsldkeknk tssrkhvklp sewqvkgngd
      361 ilcpveklgg cghkclelkc mlpanwvsml kikaerlvkl hkldnglgtl tghcsclfdn
      421 eigvvneaiq ehssnerlys plakdlqqgd lehfqwhwik gepvivrnvh eltsglswep
      481 mvlwrafrdi sskkgssnvn vkaidcldlc evelnihkff mgylegcvhs nswpqilklk
      541 dwppsnhfee llprhcaefv sslpfleytn pfsgilnmaa klpanslrpd lgpktyiayg
      601 fveelgrgds vtklhfdmsd avnvlvhsae vihtsdqlad ieilkmrhvr qdqmelygny
      661 kdsnlpleeq vgmdfwpkva khskmksits kkevnpcqcs dsttkllmkt lefqneensk
      721 ldkesngrik eahtsdtsfs nmhspngwde dscllmkgqv dadvmvkvvk spnrksrtrk
      781 kkvkscqtsl lvqneeelev gesngkiykt hsdtaidvcl tneasgggal wdifrrqdvp
      841 kleeylrkhh refrhvycsp vdqvvhpihd qtfylnmhhk rklkeefgve pwtiiqklge
      901 aifipagcph qvrnlksctk valdfvspen irecirltee frvlphehrs kedklevkkm
      961 mlhalkyave eleklta
//
LOCUS       XP_016674065             459 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 37 [Gossypium hirsutum].
ACCESSION   XP_016674065
VERSION     XP_016674065.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818576.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674065.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..459
                     /product="zinc finger CCCH domain-containing protein 37"
                     /calculated_mol_wt=50175
     Region          103..128
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          155..181
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          202..228
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          273..299
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          364..389
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          419..440
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     CDS             1..459
                     /gene="LOC107893543"
                     /coded_by="XM_016818576.2:227..1606"
                     /db_xref="GeneID:107893543"
ORIGIN      
        1 manqfygyss pspsastlhr yldsdaasqs qshllqqlhp saaaaaaaaa slikrpsqvl
       61 yhqnildaqn tlgqieawys asslvkrprl esasnlpiyp qrpgekdcah ymltrtckfg
      121 dsckfdhpiw vpeggipywk evppvpages lperpgepdc pyflktqrck fgskckfnhp
      181 kdkldapgds enltvsglpe rpseppcafy mktgtckfgs tckfnhpkdi qiqlslqnnv
      241 nceqsdiamk iggisgdikp alyhnskglp vrpdevdcpf ylktgsckyg stcrynhpdr
      301 nafippvalg hsliasasnl nigvvnpass lyqtidprls qtallaqqtm ptlvgtqtvy
      361 pqrpgqtecd yymktgeckf gdrckfhhpi drlttneasq eaikltlagl prregsvhcp
      421 yymktgtcky gatckfdhpp pgevmsvtgv qgtsttmsg
//
LOCUS       XP_016674066             602 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase [Gossypium hirsutum].
ACCESSION   XP_016674066
VERSION     XP_016674066.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818577.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..602
                     /product="CTP synthase"
                     /calculated_mol_wt=65858
     Region          1..557
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..602
                     /gene="LOC107893545"
                     /coded_by="XM_016818577.2:486..2294"
                     /db_xref="GeneID:107893545"
ORIGIN      
        1 mkyvlvtggv vsglgkgvta ssiglllksc gfrvtsikid pylntdagtm spfehgevfv
       61 lddggevdld lgnyerfldi tltrdnnitt gkiyqyvink erkgdylgkt vqvvphitda
      121 iqewieraal ipvdgkegpa dicvielggt igdiesmpfi ealgqfsyrv gtgnfclvhv
      181 slvpvlnvvg eqktkptqhs vrglrglglt pnilacrstm aldenvkekl srfchvpaen
      241 ivtlydvpni whiplllrdq kaheallkel nllgiarkpd ltewtartkv ydilhdpvki
      301 amvgkyvglk dsylsvlkal lhasvrcrkk lvvewveash leditakedp dtykaawnrl
      361 kgadgilvpg gfgdrgvqgk ilaakyares kvpflgiclg mqiavveyar svlglydant
      421 eefdpqtsnp cvifmpegsk thmggtmrlg srrtyfkvpd cksaklygda tfvderhrhr
      481 yevnpdmisq leaaglsfvg rdesgrrmei velpshpyfi gvqfhpefks rpgkpsalfs
      541 gliaascgqm dlllnksdhl sngmanging katskprang ncfkssngsl ngvysngngv
      601 hh
//
LOCUS       XP_016674067             550 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase RHS3 [Gossypium hirsutum].
ACCESSION   XP_016674067
VERSION     XP_016674067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..550
                     /product="serine/threonine-protein kinase RHS3"
                     /calculated_mol_wt=60748
     Region          156..511
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(164..168,172,185,187,219,235..236,238,242,244,283,
                     285,287..288,290,300..301,304,390..395,422,428,431)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(164..168,172,185,187,219,236..238,242,283,285,
                     287..288,290,300..301)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(168,242,244,283,285,287,304,390..395,422,428,431)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(300..310,387..395)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     CDS             1..550
                     /gene="LOC107893546"
                     /coded_by="XM_016818578.2:341..1993"
                     /db_xref="GeneID:107893546"
ORIGIN      
        1 msskinktln sdntesshms sgaatdsqhs kkknslacnp ppqdqrkveg mgknsssgas
       61 hhghgskvne nvssnhhyap kmmdpvkmpn tpsdadfhss waktndarna nhqgsrnsnr
      121 sdsmesttap lrphtggdvr wdainsvsak gpiglsnfrl lkrigygdig svylvelrgt
      181 nayfamkvmd kaslasrnkl lraqtereil glldhpflpt lysyfetekf yclvmefcsg
      241 gnlhslrqkq pnkhfteeaa rffasevlla leylhmlgiv yrdlkpenvl vrdeghimls
      301 dfdlslrcsv sptlvkssss hqasngggst ggildnehvp ahgcmqpstf fprilpgkkn
      361 rksksdfglf vggsmpelma eptnvrsmsf vgtheylape iirgeghgsa vdwwtfgifl
      421 yellhgttpf kgqgnratlf nvvgqplrfp etpqvsfvar dlirgllvke pskriackrg
      481 ateikqhpff egvnwalvrs ampphvpepv dfsllsakee krnhhlqhel gdpgapqkan
      541 ssdyvqfeyf
//
LOCUS       XP_016674068             417 aa            linear   PLN 06-AUG-2024
DEFINITION  isocitrate dehydrogenase [NADP] [Gossypium hirsutum].
ACCESSION   XP_016674068
VERSION     XP_016674068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..417
                     /product="isocitrate dehydrogenase [NADP]"
                     /calculated_mol_wt=47004
     Region          1..411
                     /region_name="PLN00103"
                     /note="isocitrate dehydrogenase (NADP+); Provisional"
                     /db_xref="CDD:177720"
     CDS             1..417
                     /gene="LOC107893548"
                     /coded_by="XM_016818579.2:830..2083"
                     /db_xref="GeneID:107893548"
ORIGIN      
        1 mafptkikvm npivemdgde mtriiwksik eklifpflel dikyfdlglh nrdatndevt
       61 iasgeatlky nvaikcatit pdegrvkefn lkemwkspng tirnilngtv frepiicknv
      121 prlvpswtkp icigrhafgd qyratdlvvq esgklmlvfv pdksnekkel evfnfkgagg
      181 valsmyntde sirafaeasm ttayqkkwpl ylstkntilk sydgrfkdmf qevyetqwks
      241 kfeaegiwye hrliddmvay alkseggyvw acknydgdvq sdflaqgfgs lglmtsvlmc
      301 pdgktieaea ahgtvtrhyr vhktggetst nsiasifaws rglahrarld gndrlldftq
      361 kleaacvgtv esgkmtkdla llihgpkvsr sqylnteefi eavakelsnr myvkpkl
//
LOCUS       XP_016674069             165 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0678 fatty acid-binding protein-like protein At1g79260
            [Gossypium hirsutum].
ACCESSION   XP_016674069
VERSION     XP_016674069.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818580.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674069.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="UPF0678 fatty acid-binding protein-like protein
                     At1g79260"
                     /calculated_mol_wt=18065
     Region          15..163
                     /region_name="THAP4_heme-bd"
                     /note="THAP4-like, heme-binding beta-barrel domain;
                     pfam08768"
                     /db_xref="CDD:462593"
     CDS             1..165
                     /gene="LOC107893549"
                     /coded_by="XM_016818580.2:188..685"
                     /db_xref="GeneID:107893549"
ORIGIN      
        1 mdkekkeess aihpavapls yllgtwkgeg eggyptinsf rygeelhfsh pasgkpviay
       61 shktwkldsg qpmhsesgyw rpkpdgslev viaqstglae vlkgtysaed nviklhsqvv
      121 anaskvreis rvykivngdl hyvvqmatnl ttlqphlkav lkklp
//
LOCUS       XP_016674070             165 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0678 fatty acid-binding protein-like protein At1g79260
            [Gossypium hirsutum].
ACCESSION   XP_016674070
VERSION     XP_016674070.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818581.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674070.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="UPF0678 fatty acid-binding protein-like protein
                     At1g79260"
                     /calculated_mol_wt=18065
     Region          15..163
                     /region_name="THAP4_heme-bd"
                     /note="THAP4-like, heme-binding beta-barrel domain;
                     pfam08768"
                     /db_xref="CDD:462593"
     CDS             1..165
                     /gene="LOC107893549"
                     /coded_by="XM_016818581.2:147..644"
                     /db_xref="GeneID:107893549"
ORIGIN      
        1 mdkekkeess aihpavapls yllgtwkgeg eggyptinsf rygeelhfsh pasgkpviay
       61 shktwkldsg qpmhsesgyw rpkpdgslev viaqstglae vlkgtysaed nviklhsqvv
      121 anaskvreis rvykivngdl hyvvqmatnl ttlqphlkav lkklp
//
LOCUS       XP_016674071             473 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase NANA, chloroplast [Gossypium hirsutum].
ACCESSION   XP_016674071
VERSION     XP_016674071.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818582.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674071.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..473
                     /product="aspartic proteinase NANA, chloroplast"
                     /calculated_mol_wt=52400
     Region          <98..>166
                     /region_name="PTZ00165"
                     /note="aspartyl protease; Provisional"
                     /db_xref="CDD:240300"
     Region          104..470
                     /region_name="pepsin_A_like_plant"
                     /note="Chroloplast Nucleoids DNA-binding Protease and
                     Nucellin, pepsin-like aspartic proteases from plants;
                     cd05476"
                     /db_xref="CDD:133143"
     Site            order(123..126,349..352)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133143"
     Site            order(123,349)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133143"
     Site            order(196..199,203..206)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133143"
     CDS             1..473
                     /gene="LOC107893550"
                     /coded_by="XM_016818582.2:286..1707"
                     /db_xref="GeneID:107893550"
ORIGIN      
        1 mkvkliilvp fmvlvsmvva qqhvdqmqhq hdsnsitlel ihrhapqftn nnpitqhqrl
       61 vdllyhdiir hgimshrrra keedpltasi kmplasgrdf gigqyitsfk vgtpsqkfwl
      121 ivdtgsdltw ircryrcsrg drsctskgri nrkrvfhapl sssfspvpcf semckvelmn
      181 lfslttcptp itpcaydyry sdgsaamgvf anetvsaglt ngrktrlhnv ligctdsfqg
      241 ptlqnvdgim glantkysfa tnaaatfggk fsyclvdhls hlnatnyiif gtnrnqvkvs
      301 gntrhtnlel daipsfyavn vigisvgnkm leipmqvwda segggtiids gtsltfladp
      361 ayqavmealk vsvskyqrvk ldgvpmeycf nstgfngslv pkliihfddg arfephwnsy
      421 viaaaaevrc lgflparfpa lsvignimqq nylwefdlkg krlvfapssc nss
//
LOCUS       XP_040941137             315 aa            linear   PLN 06-AUG-2024
DEFINITION  COP9 signalosome complex subunit 6a [Gossypium hirsutum].
ACCESSION   XP_040941137
VERSION     XP_040941137.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085203.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="COP9 signalosome complex subunit 6a"
                     /calculated_mol_wt=35346
     Region          9..311
                     /region_name="MPN_CSN6"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains without
                     catalytic isopeptidase activity, found in COP9 signalosome
                     complex subunit 6; cd08063"
                     /db_xref="CDD:163694"
     CDS             1..315
                     /gene="LOC107893551"
                     /coded_by="XM_041085203.1:134..1081"
                     /db_xref="GeneID:107893551"
ORIGIN      
        1 masssssglt fklhplvivn isdhytrvks qlnpppltst satvngvenq qqaprvygcv
       61 igvqrgrtve ifnsfellyd psthsldrpf lkkkqelykk vfphfyilgw ystgsdaqes
      121 dmhihralmd inesplyvll npainpaqkd lpvtiyesel hvidgipqli fvrssytiet
      181 veaerisvdh vahlkpsdgg saatqlaahl tgihsaikml nsrirvlhhy lvgmqkgdip
      241 censllrqvs sllrrlpaie sekfqddflm eyndtllity lamftncsst mnelvdkfnt
      301 aydrhsrrgg rtafi
//
LOCUS       XP_016741870             771 aa            linear   PLN 06-AUG-2024
DEFINITION  chloride channel protein CLC-f [Gossypium hirsutum].
ACCESSION   XP_016741870
VERSION     XP_016741870.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886381.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741870.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="chloride channel protein CLC-f"
                     /calculated_mol_wt=82615
     Region          133..538
                     /region_name="Voltage_gated_ClC"
                     /note="CLC voltage-gated chloride channel. The ClC
                     chloride channels catalyse the selective flow of Cl- ions
                     across cell membranes, thereby regulating electrical
                     excitation in skeletal muscle and the flow of salt and
                     water across epithelial barriers. This...; cd00400"
                     /db_xref="CDD:238233"
     Site            order(197..201,239..243,455..459)
                     /site_type="active"
                     /note="Cl- selectivity filter [active]"
                     /db_xref="CDD:238233"
     Site            order(198,200,241..242,455..457)
                     /site_type="other"
                     /note="Cl- binding residues [ion binding]"
                     /db_xref="CDD:238233"
     Site            241
                     /site_type="active"
                     /note="pore gating glutamate residue [active]"
                     /db_xref="CDD:238233"
     Site            order(286,295,315,322,509,512,520,528,535..536)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238233"
     Region          598..738
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04592"
                     /db_xref="CDD:341368"
     Site            order(599,601..603,625..627,710,731,733..735,738)
                     /site_type="other"
                     /note="putative ligand binding site II [chemical binding]"
                     /db_xref="CDD:341368"
     Region          599..674
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341368"
     Site            order(625,638,642..643,646,688,710..712,734)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341368"
     Region          688..738
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341368"
     CDS             1..771
                     /gene="LOC107951362"
                     /coded_by="XM_016886381.2:354..2669"
                     /db_xref="GeneID:107951362"
ORIGIN      
        1 mtgggeysdq rhllrsnshk deqhdkeenp gdlesqvtyh nsnnagfndl vkylgrgfsa
       61 rrlsfkrldr dgdrgrerss pssldhhhhp hhhhhhhqqh qghyhsyvgd aadplgdsap
      121 pewallligc llgvasglfv aafnggvhvi hewawagtpn egaawlrmqs ladtwhrill
      181 vpvtggvivg mmhglleiln qirqssssqq qgfslvagvf ptvkaiqaai tlgtgcslgp
      241 egpsvdigks cangfslmme nnrerkialv aagaasgias gfnaavagcf faietvlrpl
      301 raensppftt amiilasvis stvsnavlgt esaftvpsyd lksaaelply lilgmlcgvv
      361 svvfarlvsw ftaafeyike klglptvicp algglgagii alrypgilyw gftnvneilh
      421 tgksasapgi wlltqlaaak vvatalckgs glvgglyaps lmigaavgav fggsaaelin
      481 saipgnaava qpqayalvgm aatlasvcsv pltsvlllfe ltkdyrillp lmgavglaiw
      541 vpsvanqnke tdsemrtsar gyssvsaaee lsviekaadq ealdddmlle dlrvskamsk
      601 kylkvsmaat vkeamkcmhd nhqkfalvvd ednflegiit lgdirwclsk kqpsdiskgd
      661 stadvnpclv ssvctkgisy rgqkrglltc fadtdlaiar elmeasgvkq lpvvnrggep
      721 hkgrkrrvia vlhyesiwnc lreeinhrks vyqhshrkdn neeetinsng h
//
LOCUS       XP_016741871             740 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g26450 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016741871
VERSION     XP_016741871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886382.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..740
                     /product="uncharacterized protein At4g26450 isoform X1"
                     /calculated_mol_wt=81497
     CDS             1..740
                     /gene="LOC107951363"
                     /coded_by="XM_016886382.2:171..2393"
                     /db_xref="GeneID:107951363"
ORIGIN      
        1 mharhrtagn dyrsnsmamg vsasrispet sgrghgfynl eyrnfkrgfg rgqshpksfq
       61 phplparegt difmeagrla aeylvsqgll pptvlpakwq ngrlkkqmgd yqdyrsqegd
      121 nlhvpydgrt salarlrnan sdlgpgrrky lddnnstwsk nlskgrrkeg syrgreyggs
      181 gswsdrirgs pdleidddnv sghheepqag kdvgnglqks vsnefapkge eldnfdvkyn
      241 ledelslmas ssgaekdlks etdgelqkrs desmdfraea velkdggndn veteeegiln
      301 dssfkhsste ddvsgktgad llalckfakv ptktrssltl knlkpdsvst igqegvsdfe
      361 spnvpqalle dnslggssgd lllnktqdsk pdselskdls vhsfgldhmy gvdqgkctrs
      421 qsfpdrvllh dteeelaqem pglqrscsmv vieergekrg leqsdlrega kkprewlqpv
      481 ttkaeflpfs dfddkkvgsv egtaspsekv gvivergiqd slvttssfpd gdgessvsyv
      541 qekqlfpnaf kicdlnlmea sdineshhnd piimysstse tkseaatidi dlsmsnsnsg
      601 ggnrhtsnck eievidlend ctqedkavdt lerksepmfv smngdmtdvp dqydglmite
      661 flqnfsncpp ddinahplqn esinslqted inplqnemgl hngegtladd dsiymslgei
      721 plsflpaweq ppsqgyekpf
//
LOCUS       XP_016741874             727 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g26450 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016741874
VERSION     XP_016741874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..727
                     /product="uncharacterized protein At4g26450 isoform X2"
                     /calculated_mol_wt=79932
     CDS             1..727
                     /gene="LOC107951363"
                     /coded_by="XM_016886385.2:369..2552"
                     /db_xref="GeneID:107951363"
ORIGIN      
        1 mharhrtagn dyrsnsmamg vsasrispet sgrghgfynl eyrnfkrgfg rgqshpksfq
       61 phplparegt difmeagrla aeylvsqgll pptvlpakwq ngrlkkqmgd yqdyrsqegd
      121 nlhvpydgrt salarlrnan sdlgpgrrky lddnnstwsk nlskgrrkeg syrgreyggs
      181 gswsdrirgs pdleidddnv sghheepqag kdvgnglqks vsnefapkge eldnfdvkyn
      241 ledelslmas ssgaekdlks etdgelqkrs desmdfraea velkdggndn veteeegiln
      301 dssfkhsste ddvsgktgad llalckfakv ptktrssltl knlkpdsvst igqegvsdfe
      361 spnvpqalle dnslggssgd lllnktqdsk pdselskdls vhsfgldhmy gvdqgkctrs
      421 qsfpdrvllh dteeelaqem pglqrscsmv vieergekrg leqsdlrega kkprewlqpv
      481 ttkaeflpfs dfddkkvgsv egtaspsekv gvivergiqd slvttssfpd gdgessvsyv
      541 qekqlfpnaf kicdlnlmea sdineshhnd piimysstse tkseaatidi dlsmsnsnsg
      601 ggnrhtsnck eievidlend ctqedkavdt lerksepmfv smngdmtdvp dqydglmite
      661 flqnfsncpp ddinahplqn esinslqted inplqnemgl hngegtladd dsiymslgei
      721 plsmppi
//
LOCUS       XP_040941138             734 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g26450 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941138
VERSION     XP_040941138.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085204.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..734
                     /product="uncharacterized protein At4g26450 isoform X3"
                     /calculated_mol_wt=80631
     CDS             1..734
                     /gene="LOC107951363"
                     /coded_by="XM_041085204.1:163..2367"
                     /db_xref="GeneID:107951363"
ORIGIN      
        1 mharhrtagn dyrsnsmamg vsasrispet sgrghgfynl eyrnfkrgfg rgqshpksfq
       61 phplparegt difmeagrla aeylvsqgll pptvlpakwq ngrlkkqmgd yqdyrsqegd
      121 nlhvpydgrt salarlrnan sdlgpgrrky lddnnstwsk nlskgrrkeg syrgreyggs
      181 gswsdrirgs pdleidddnv sghheepqag kdvgnglqks vsnefapkge eldnfdvkyn
      241 ledelslmas ssgaekdlks etdgelqkrs desmdfraea velkdggndn veteeegiln
      301 dssfkhsste ddvsgktgad llalckfakv ptktrssltl knlkpdsvst igqegvsdfe
      361 spnvpqalle dnslggssgd lllnktqdsk pdselskdls vhsfgldhmy gvdqgkctrs
      421 qsfpdrvllh dteeelaqem pglqrscsmv vieergekrg leqsdlrega kkprewlqpv
      481 ttkaeflpfs dfddkkvgsv egtaspsekv gvivergiqd slvttssfpd gdgessvsyv
      541 qekqlfpnaf kicdlnlmea sdineshhnd piimysstse tkseaatidi dlsmsnsnsg
      601 ggnrhtsnck eievidlend ctqedkavdt lerksepmfv smngdmtdvp dqydglmite
      661 flqnfsncpp ddinahplqn esinslqted inplqnemgl hngegtladd dsiymslgei
      721 plsakmcgge sylp
//
LOCUS       XP_040941140            1450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941140
VERSION     XP_040941140.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085206.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1450
                     /product="uncharacterized protein"
                     /calculated_mol_wt=159061
     CDS             1..1450
                     /gene="LOC107951365"
                     /coded_by="XM_041085206.1:671..5023"
                     /db_xref="GeneID:107951365"
ORIGIN      
        1 mlsienpppd ppcpcqvivq lksggdeiqr pphklplpev dllkkpsldn hhhrhhhqtp
       61 lpkfsirdyv ftargkdikk nwpfspknlq lclkhglkdp lppfqpldtv rnlsiercvv
      121 etnpfekqni rksgeepsgs ndhvvlessn dahsnhnlag tcidnsscrs gehgsglpst
      181 tasvsqsdid svlinkqssl pletdtsvea saevqatgki rktenttrps gkkcrlivkf
      241 gahsdrsste ditsnctmls esmaskvcpv cktfssssnt tlnahidqcl sdestpkwtv
      301 dskltrhrik prktrlmvdv yatakpctle eldrrngtsw atasniprqd sgkleisdeg
      361 kkqkisstip kdtgdvgavy fdangtkiri lskpndaplv skvgddpgpn kafkgskgsk
      421 flstkkkrrh slkhnkylkl apqsrklfsh ktrssmivgg qegccgvses cknegshvpr
      481 qvkssdsrnf rervcskqag lsrkpdnqdr lqpsnckryv tldlqvpsdq phqgdpvver
      541 ncvrrlknls knpisspeks ektekpvyea psdmvemehs lgrkrvrssl sgarirnkve
      601 lrplkqnanq lskdhphldr hhmvrsmnsg gnsssslskk vididansnp nspvtattpi
      661 sdqsfafkcf rsspkknlps assrpsmvks gsnlvknhlt mesqlhfmee ideeeswgpe
      721 sdqecdlvhd gaknqcgrke itkemsfggs siqgaqsgeq rgrksvsree ymalkslhse
      781 pryydndeme ntdssargse nildrvdgle sieetvtsls qpvetkfnel snlsmnrsns
      841 lqtnedysrp lcggeelanl tepslvgkph rfcaevsdgi igqtanmgge ldsdaaqvns
      901 fpevdpipip gppgsflpsp rdmgsddfqg nsslttsriq ssqdqldlvd gdssdspisa
      961 vstisnsvea ksdlkyaepl afvdapavle nyrsgysttk seplaengaa fphssagldr
     1021 tlegeklrvh risfgkrpli fkndeqpccc qrkdrssqgf alnyqesqll rqrtmgsmlv
     1081 patgmqiaan qnispdnlda rpettsrsss aslgseqmvl pvmklpadpi pfngfpdasv
     1141 klsasndrds atpsssnpvl rlmgknlmvv nkeedksvpv gqaqsfaqsd hptpkfptps
     1201 gispsnmgnq agmpfhhtms qsslifdqhp kdlvgqsfdv qftngyrnha nlgtppqfpa
     1261 gmffdermdr gltnsmefyk yecdynlpaq lnrlknkpvp aatydmekva tldgrhrngd
     1321 savsskqvii iddepesett kfadiakhfe glresplipa gismplvpnh sirrrnpfsr
     1381 yhsegalvgd pnmvqnknfn aipsgrgntv pvrwdcsseg sgvpqraslm avspsrghlr
     1441 pavsyspsls
//
LOCUS       XP_040941141            1450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941141
VERSION     XP_040941141.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085207.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1450
                     /product="uncharacterized protein"
                     /calculated_mol_wt=159061
     CDS             1..1450
                     /gene="LOC107951365"
                     /coded_by="XM_041085207.1:931..5283"
                     /db_xref="GeneID:107951365"
ORIGIN      
        1 mlsienpppd ppcpcqvivq lksggdeiqr pphklplpev dllkkpsldn hhhrhhhqtp
       61 lpkfsirdyv ftargkdikk nwpfspknlq lclkhglkdp lppfqpldtv rnlsiercvv
      121 etnpfekqni rksgeepsgs ndhvvlessn dahsnhnlag tcidnsscrs gehgsglpst
      181 tasvsqsdid svlinkqssl pletdtsvea saevqatgki rktenttrps gkkcrlivkf
      241 gahsdrsste ditsnctmls esmaskvcpv cktfssssnt tlnahidqcl sdestpkwtv
      301 dskltrhrik prktrlmvdv yatakpctle eldrrngtsw atasniprqd sgkleisdeg
      361 kkqkisstip kdtgdvgavy fdangtkiri lskpndaplv skvgddpgpn kafkgskgsk
      421 flstkkkrrh slkhnkylkl apqsrklfsh ktrssmivgg qegccgvses cknegshvpr
      481 qvkssdsrnf rervcskqag lsrkpdnqdr lqpsnckryv tldlqvpsdq phqgdpvver
      541 ncvrrlknls knpisspeks ektekpvyea psdmvemehs lgrkrvrssl sgarirnkve
      601 lrplkqnanq lskdhphldr hhmvrsmnsg gnsssslskk vididansnp nspvtattpi
      661 sdqsfafkcf rsspkknlps assrpsmvks gsnlvknhlt mesqlhfmee ideeeswgpe
      721 sdqecdlvhd gaknqcgrke itkemsfggs siqgaqsgeq rgrksvsree ymalkslhse
      781 pryydndeme ntdssargse nildrvdgle sieetvtsls qpvetkfnel snlsmnrsns
      841 lqtnedysrp lcggeelanl tepslvgkph rfcaevsdgi igqtanmgge ldsdaaqvns
      901 fpevdpipip gppgsflpsp rdmgsddfqg nsslttsriq ssqdqldlvd gdssdspisa
      961 vstisnsvea ksdlkyaepl afvdapavle nyrsgysttk seplaengaa fphssagldr
     1021 tlegeklrvh risfgkrpli fkndeqpccc qrkdrssqgf alnyqesqll rqrtmgsmlv
     1081 patgmqiaan qnispdnlda rpettsrsss aslgseqmvl pvmklpadpi pfngfpdasv
     1141 klsasndrds atpsssnpvl rlmgknlmvv nkeedksvpv gqaqsfaqsd hptpkfptps
     1201 gispsnmgnq agmpfhhtms qsslifdqhp kdlvgqsfdv qftngyrnha nlgtppqfpa
     1261 gmffdermdr gltnsmefyk yecdynlpaq lnrlknkpvp aatydmekva tldgrhrngd
     1321 savsskqvii iddepesett kfadiakhfe glresplipa gismplvpnh sirrrnpfsr
     1381 yhsegalvgd pnmvqnknfn aipsgrgntv pvrwdcsseg sgvpqraslm avspsrghlr
     1441 pavsyspsls
//
LOCUS       XP_040941142            1450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941142
VERSION     XP_040941142.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085208.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1450
                     /product="uncharacterized protein"
                     /calculated_mol_wt=159061
     CDS             1..1450
                     /gene="LOC107951365"
                     /coded_by="XM_041085208.1:798..5150"
                     /db_xref="GeneID:107951365"
ORIGIN      
        1 mlsienpppd ppcpcqvivq lksggdeiqr pphklplpev dllkkpsldn hhhrhhhqtp
       61 lpkfsirdyv ftargkdikk nwpfspknlq lclkhglkdp lppfqpldtv rnlsiercvv
      121 etnpfekqni rksgeepsgs ndhvvlessn dahsnhnlag tcidnsscrs gehgsglpst
      181 tasvsqsdid svlinkqssl pletdtsvea saevqatgki rktenttrps gkkcrlivkf
      241 gahsdrsste ditsnctmls esmaskvcpv cktfssssnt tlnahidqcl sdestpkwtv
      301 dskltrhrik prktrlmvdv yatakpctle eldrrngtsw atasniprqd sgkleisdeg
      361 kkqkisstip kdtgdvgavy fdangtkiri lskpndaplv skvgddpgpn kafkgskgsk
      421 flstkkkrrh slkhnkylkl apqsrklfsh ktrssmivgg qegccgvses cknegshvpr
      481 qvkssdsrnf rervcskqag lsrkpdnqdr lqpsnckryv tldlqvpsdq phqgdpvver
      541 ncvrrlknls knpisspeks ektekpvyea psdmvemehs lgrkrvrssl sgarirnkve
      601 lrplkqnanq lskdhphldr hhmvrsmnsg gnsssslskk vididansnp nspvtattpi
      661 sdqsfafkcf rsspkknlps assrpsmvks gsnlvknhlt mesqlhfmee ideeeswgpe
      721 sdqecdlvhd gaknqcgrke itkemsfggs siqgaqsgeq rgrksvsree ymalkslhse
      781 pryydndeme ntdssargse nildrvdgle sieetvtsls qpvetkfnel snlsmnrsns
      841 lqtnedysrp lcggeelanl tepslvgkph rfcaevsdgi igqtanmgge ldsdaaqvns
      901 fpevdpipip gppgsflpsp rdmgsddfqg nsslttsriq ssqdqldlvd gdssdspisa
      961 vstisnsvea ksdlkyaepl afvdapavle nyrsgysttk seplaengaa fphssagldr
     1021 tlegeklrvh risfgkrpli fkndeqpccc qrkdrssqgf alnyqesqll rqrtmgsmlv
     1081 patgmqiaan qnispdnlda rpettsrsss aslgseqmvl pvmklpadpi pfngfpdasv
     1141 klsasndrds atpsssnpvl rlmgknlmvv nkeedksvpv gqaqsfaqsd hptpkfptps
     1201 gispsnmgnq agmpfhhtms qsslifdqhp kdlvgqsfdv qftngyrnha nlgtppqfpa
     1261 gmffdermdr gltnsmefyk yecdynlpaq lnrlknkpvp aatydmekva tldgrhrngd
     1321 savsskqvii iddepesett kfadiakhfe glresplipa gismplvpnh sirrrnpfsr
     1381 yhsegalvgd pnmvqnknfn aipsgrgntv pvrwdcsseg sgvpqraslm avspsrghlr
     1441 pavsyspsls
//
LOCUS       XP_040941143            1450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941143
VERSION     XP_040941143.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085209.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1450
                     /product="uncharacterized protein"
                     /calculated_mol_wt=159061
     CDS             1..1450
                     /gene="LOC107951365"
                     /coded_by="XM_041085209.1:632..4984"
                     /db_xref="GeneID:107951365"
ORIGIN      
        1 mlsienpppd ppcpcqvivq lksggdeiqr pphklplpev dllkkpsldn hhhrhhhqtp
       61 lpkfsirdyv ftargkdikk nwpfspknlq lclkhglkdp lppfqpldtv rnlsiercvv
      121 etnpfekqni rksgeepsgs ndhvvlessn dahsnhnlag tcidnsscrs gehgsglpst
      181 tasvsqsdid svlinkqssl pletdtsvea saevqatgki rktenttrps gkkcrlivkf
      241 gahsdrsste ditsnctmls esmaskvcpv cktfssssnt tlnahidqcl sdestpkwtv
      301 dskltrhrik prktrlmvdv yatakpctle eldrrngtsw atasniprqd sgkleisdeg
      361 kkqkisstip kdtgdvgavy fdangtkiri lskpndaplv skvgddpgpn kafkgskgsk
      421 flstkkkrrh slkhnkylkl apqsrklfsh ktrssmivgg qegccgvses cknegshvpr
      481 qvkssdsrnf rervcskqag lsrkpdnqdr lqpsnckryv tldlqvpsdq phqgdpvver
      541 ncvrrlknls knpisspeks ektekpvyea psdmvemehs lgrkrvrssl sgarirnkve
      601 lrplkqnanq lskdhphldr hhmvrsmnsg gnsssslskk vididansnp nspvtattpi
      661 sdqsfafkcf rsspkknlps assrpsmvks gsnlvknhlt mesqlhfmee ideeeswgpe
      721 sdqecdlvhd gaknqcgrke itkemsfggs siqgaqsgeq rgrksvsree ymalkslhse
      781 pryydndeme ntdssargse nildrvdgle sieetvtsls qpvetkfnel snlsmnrsns
      841 lqtnedysrp lcggeelanl tepslvgkph rfcaevsdgi igqtanmgge ldsdaaqvns
      901 fpevdpipip gppgsflpsp rdmgsddfqg nsslttsriq ssqdqldlvd gdssdspisa
      961 vstisnsvea ksdlkyaepl afvdapavle nyrsgysttk seplaengaa fphssagldr
     1021 tlegeklrvh risfgkrpli fkndeqpccc qrkdrssqgf alnyqesqll rqrtmgsmlv
     1081 patgmqiaan qnispdnlda rpettsrsss aslgseqmvl pvmklpadpi pfngfpdasv
     1141 klsasndrds atpsssnpvl rlmgknlmvv nkeedksvpv gqaqsfaqsd hptpkfptps
     1201 gispsnmgnq agmpfhhtms qsslifdqhp kdlvgqsfdv qftngyrnha nlgtppqfpa
     1261 gmffdermdr gltnsmefyk yecdynlpaq lnrlknkpvp aatydmekva tldgrhrngd
     1321 savsskqvii iddepesett kfadiakhfe glresplipa gismplvpnh sirrrnpfsr
     1381 yhsegalvgd pnmvqnknfn aipsgrgntv pvrwdcsseg sgvpqraslm avspsrghlr
     1441 pavsyspsls
//
LOCUS       XP_016741879             628 aa            linear   PLN 06-AUG-2024
DEFINITION  WPP domain-interacting protein 2 [Gossypium hirsutum].
ACCESSION   XP_016741879
VERSION     XP_016741879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..628
                     /product="WPP domain-interacting protein 2"
                     /calculated_mol_wt=68901
     Region          <430..>577
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     CDS             1..628
                     /gene="LOC107951366"
                     /coded_by="XM_016886390.2:276..2162"
                     /db_xref="GeneID:107951366"
ORIGIN      
        1 mdlgsecsal elvedneatq ntiphvgddk mknnhgddck skdngsctid nltqrsaidq
       61 tgysdaltag nhvkgtaeiv lpmhstplva gkspggsspp ttkgyglkkw rrikrdfvkd
      121 stasmdsski lkrgltgsan ldpskpqqra speikqnsas pigpvnmlst svapgsmfav
      181 gaafasatds ensedrssks staasmpkvr ydlpavlgym hdknqmknlg gnivgnsshr
      241 vqqgkgraes skkargvrvk iekenshssv esdsrssnfi ftqhpisvts ngkqsgnpmn
      301 ydgensdeah eddhqiseev qtvyrkensg dieelspedl aaelswedke ekngnhrpsp
      361 dqdplvqsil alqsvqeale nevqklveig kepvrdgsvn innvhvdstf adeeihetss
      421 sdqlasekit ksasgsletq vftlthkvky leskleears vlqvkeskis elktsvkssg
      481 swkeesrsia esqqdeyrkm eldleglfqk kmeaeieflv ltweieklkv svgnqitvve
      541 eqtslvveqe qmlnklgeve skavmlkkqa eelekyhgni ldveevlqmr grvckvmscf
      601 ftqlvllvlv flflilqfsi hsgvvvpt
//
LOCUS       XP_016741880             628 aa            linear   PLN 06-AUG-2024
DEFINITION  WPP domain-interacting protein 2 [Gossypium hirsutum].
ACCESSION   XP_016741880
VERSION     XP_016741880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..628
                     /product="WPP domain-interacting protein 2"
                     /calculated_mol_wt=68901
     Region          <430..>577
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     CDS             1..628
                     /gene="LOC107951366"
                     /coded_by="XM_016886391.2:171..2057"
                     /db_xref="GeneID:107951366"
ORIGIN      
        1 mdlgsecsal elvedneatq ntiphvgddk mknnhgddck skdngsctid nltqrsaidq
       61 tgysdaltag nhvkgtaeiv lpmhstplva gkspggsspp ttkgyglkkw rrikrdfvkd
      121 stasmdsski lkrgltgsan ldpskpqqra speikqnsas pigpvnmlst svapgsmfav
      181 gaafasatds ensedrssks staasmpkvr ydlpavlgym hdknqmknlg gnivgnsshr
      241 vqqgkgraes skkargvrvk iekenshssv esdsrssnfi ftqhpisvts ngkqsgnpmn
      301 ydgensdeah eddhqiseev qtvyrkensg dieelspedl aaelswedke ekngnhrpsp
      361 dqdplvqsil alqsvqeale nevqklveig kepvrdgsvn innvhvdstf adeeihetss
      421 sdqlasekit ksasgsletq vftlthkvky leskleears vlqvkeskis elktsvkssg
      481 swkeesrsia esqqdeyrkm eldleglfqk kmeaeieflv ltweieklkv svgnqitvve
      541 eqtslvveqe qmlnklgeve skavmlkkqa eelekyhgni ldveevlqmr grvckvmscf
      601 ftqlvllvlv flflilqfsi hsgvvvpt
//
LOCUS       XP_040941144             306 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941144
VERSION     XP_040941144.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085210.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..306
                     /product="high mobility group B protein 10 isoform X1"
                     /calculated_mol_wt=34808
     Region          33..118
                     /region_name="ARID_HMGB9-like"
                     /note="ARID/BRIGHT DNA binding domain of Arabidopsis
                     thaliana high mobility group B proteins HMGB9, HMGB10,
                     HMGB11, HMGB15 and similar proteins; cd16872"
                     /db_xref="CDD:350636"
     Site            order(53..59,84,86..87,90,101,103..105,107)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350636"
     Region          232..297
                     /region_name="HMG-box_AtHMGB9-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 9 (HMGB9) and
                     similar proteins; cd22009"
                     /db_xref="CDD:438825"
     Site            order(233..234,236..240,243..244,251,262..263,266,
                     269..270,277,281,284,290)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438825"
     CDS             1..306
                     /gene="LOC107951367"
                     /coded_by="XM_041085210.1:102..1022"
                     /db_xref="GeneID:107951367"
ORIGIN      
        1 msehqeqter rnghpsmsry psptatyedv lqspdlfwek lkafhislgf kfkvpvvggk
       61 aldlhqlfve vtsrgglekv ikdrkwkevi vgfrfpttit sasfvlrkyy lsllyhfeqv
      121 yyfrkqlspv stpgtasesl vtgsanamed astnqltavg tqelqigssv tgiidgkfdn
      181 gylvtvrlgs dqfkgvlyhi pqmhqlsqss ntsdvpprrr krsrlaqdps rpksnrsgyn
      241 hfyaehyaql kpmyygeekv iskkignlws nlteaekqvy qekgmkdery gtemleyrss
      301 hdstpq
//
LOCUS       XP_016741882             295 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016741882
VERSION     XP_016741882.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741882.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..295
                     /product="high mobility group B protein 10 isoform X2"
                     /calculated_mol_wt=33317
     Region          33..118
                     /region_name="ARID_HMGB9-like"
                     /note="ARID/BRIGHT DNA binding domain of Arabidopsis
                     thaliana high mobility group B proteins HMGB9, HMGB10,
                     HMGB11, HMGB15 and similar proteins; cd16872"
                     /db_xref="CDD:350636"
     Site            order(53..59,84,86..87,90,101,103..105,107)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350636"
     Region          232..288
                     /region_name="HMG-box_SF"
                     /note="high mobility group (HMG)-box domain superfamily;
                     cl00082"
                     /db_xref="CDD:469606"
     Site            order(234,236..240,243..244,251,262..263,266,269..270,277,
                     281,284,288)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438789"
     CDS             1..295
                     /gene="LOC107951367"
                     /coded_by="XM_016886393.2:102..989"
                     /db_xref="GeneID:107951367"
ORIGIN      
        1 msehqeqter rnghpsmsry psptatyedv lqspdlfwek lkafhislgf kfkvpvvggk
       61 aldlhqlfve vtsrgglekv ikdrkwkevi vgfrfpttit sasfvlrkyy lsllyhfeqv
      121 yyfrkqlspv stpgtasesl vtgsanamed astnqltavg tqelqigssv tgiidgkfdn
      181 gylvtvrlgs dqfkgvlyhi pqmhqlsqss ntsdvpprrr krsrlaqdps rpksnrsgyn
      241 hfyaehyaql kpmyygeekv iskkignlws nlteaekqvy qekgmkdvcv cvcav
//
LOCUS       XP_016741883             158 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem I reaction center subunit V, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016741883
VERSION     XP_016741883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="photosystem I reaction center subunit V,
                     chloroplastic"
                     /calculated_mol_wt=16940
     Region          1..157
                     /region_name="PSI_PSAK"
                     /note="Photosystem I psaG / psaK; cl11425"
                     /db_xref="CDD:448251"
     CDS             1..158
                     /gene="LOC107951368"
                     /coded_by="XM_016886394.2:1..477"
                     /db_xref="GeneID:107951368"
ORIGIN      
        1 masasalltp iftttlqnkh gsrhniatps fqglrplrka pssklaplsc grkvggvkae
       61 lsapvvisls tglslflgrf vffnfqrenv akqvpeqngl thfeagdtra keyvsllksn
      121 dpvgfnlvdv lawgslghiv ayyilatssn gydpkffs
//
LOCUS       XP_016741884             475 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016741884
VERSION     XP_016741884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..475
                     /product="actin-related protein 8 isoform X1"
                     /calculated_mol_wt=52735
     Region          42..85
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(45..46,48..50,53..54,57,68..70,72,75)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(45,49,52..53,56..57,61,63..64,68..70,72)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          138..469
                     /region_name="ASKHA_NBD_AtArp8-like"
                     /note="nucleotide-binding domain (NBD) of Arabidopsis
                     thaliana actin-related protein 8 (AtArp8) and similar
                     proteins; cd13396"
                     /db_xref="CDD:466847"
     CDS             1..475
                     /gene="LOC107951369"
                     /coded_by="XM_016886395.2:162..1589"
                     /db_xref="GeneID:107951369"
ORIGIN      
        1 matllrkvwe svstrsssts hsplqltsss atssdsslgp cfdsipldil lqilrlvgpk
       61 daiklgcvsr awrslvsdnl lwiyflqyye ghddpwdsvf faelnlrsgy plqtfpsrtg
      121 elsfmriygq raqvpgsvii dgcsgyckfg wskyacpsgr satflefgni espmyarlrh
      181 ffgtiysrmq vkpstqpivl sipichyddt dsakasrrql kdaihtvlfd mnvpavcavn
      241 qatlalfaar rtsgivvnig fqvtsvvpil ngkvtrkvgv eviglgalkl tgylkelmqq
      301 nninfeslyt vrtlkenlcy vaadyktell kdtrasmevp avgwftlske rfqtgeilfq
      361 priggvsamg lhqavalcmd hchaaeltcd dtwfktivls rgtaclpgla erlekelhet
      421 lspslanglr vippphgpdt awfgakfisn lstfpgtwci rkkqfrrksr animw
//
LOCUS       XP_016741885             351 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016741885
VERSION     XP_016741885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886396.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..351
                     /product="actin-related protein 8 isoform X2"
                     /calculated_mol_wt=38875
     Region          14..345
                     /region_name="ASKHA_NBD_AtArp8-like"
                     /note="nucleotide-binding domain (NBD) of Arabidopsis
                     thaliana actin-related protein 8 (AtArp8) and similar
                     proteins; cd13396"
                     /db_xref="CDD:466847"
     CDS             1..351
                     /gene="LOC107951369"
                     /coded_by="XM_016886396.1:176..1231"
                     /db_xref="GeneID:107951369"
ORIGIN      
        1 mriygqraqv pgsviidgcs gyckfgwsky acpsgrsatf lefgniespm yarlrhffgt
       61 iysrmqvkps tqpivlsipi chyddtdsak asrrqlkdai htvlfdmnvp avcavnqatl
      121 alfaarrtsg ivvnigfqvt svvpilngkv trkvgvevig lgalkltgyl kelmqqnnin
      181 feslytvrtl kenlcyvaad yktellkdtr asmevpavgw ftlskerfqt geilfqprig
      241 gvsamglhqa valcmdhcha aeltcddtwf ktivlsrgta clpglaerle kelhetlsps
      301 langlrvipp phgpdtawfg akfisnlstf pgtwcirkkq frrksranim w
//
LOCUS       XP_016741886             306 aa            linear   PLN 06-AUG-2024
DEFINITION  eEF1A lysine and N-terminal methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016741886
VERSION     XP_016741886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886397.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..306
                     /product="eEF1A lysine and N-terminal methyltransferase"
                     /calculated_mol_wt=33401
     Region          85..262
                     /region_name="SpeE"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; COG0421"
                     /db_xref="CDD:440190"
     CDS             1..306
                     /gene="LOC107951371"
                     /coded_by="XM_016886397.2:150..1070"
                     /db_xref="GeneID:107951371"
ORIGIN      
        1 mvqsealltr dglfdksvyg tekkkassss kskrrgalkr nnessgkmkv yhgylassyh
       61 taiisgfsli ssylesvass gnrvkavvig lgagllpmfl hgcmqsmqie gveldpvmln
      121 lardyfgfte dkrmkvhiad giqfvrdyrn lfsagnevll ssngscklsd aesrstaidi
      181 iivdvdssds ssglrcptad fvedsflqnv kdtlskqglf vinlvsrspa ikdavvsrmk
      241 evfshlfciq legevnlvlf glcseshiee dcipdaalkl dkllksehpe isqsitdaak
      301 klkrlk
//
LOCUS       XP_016741888             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrodolichyl diphosphate synthase CPT3 [Gossypium hirsutum].
ACCESSION   XP_016741888
VERSION     XP_016741888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrodolichyl diphosphate synthase CPT3"
                     /calculated_mol_wt=32978
     Region          35..277
                     /region_name="Cis_IPPS"
                     /note="Cis (Z)-Isoprenyl Diphosphate Synthases; cd00475"
                     /db_xref="CDD:259850"
     Site            order(40..45,54,58,62,65,84,92,96,103..104,107,159,233,
                     239,241)
                     /site_type="active"
                     /db_xref="CDD:259850"
     Site            order(166..167,169..170,173..174,211..213,216,227,
                     238..242,245..247,249..253,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259850"
     CDS             1..289
                     /gene="LOC107951372"
                     /coded_by="XM_016886399.2:759..1628"
                     /db_xref="GeneID:107951372"
ORIGIN      
        1 merirerviq iygnlvsllq kcifcilsvg pipnhiafim dgnrrfakkc klmegaghkv
       61 gfsalmsmlk ycyefgvryv tvyafsienf krspeevqsl mdlmlkkiee ilkkqsivnr
      121 ygvrvifsgn lkllsepvrl aaeramlata knskavlsic vaytstneim havqesceek
      181 wdeitllnss gagyglislg gyeqdemdhl ikltdiekhm ymaaapdpdi iirtsgetrl
      241 snfllwqsan cylyspsvlw peigfrqflw ailnfqqihf yldklrkqs
//
LOCUS       XP_040941147             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrodolichyl diphosphate synthase CPT3 [Gossypium hirsutum].
ACCESSION   XP_040941147
VERSION     XP_040941147.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085213.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrodolichyl diphosphate synthase CPT3"
                     /calculated_mol_wt=32978
     Region          35..277
                     /region_name="Cis_IPPS"
                     /note="Cis (Z)-Isoprenyl Diphosphate Synthases; cd00475"
                     /db_xref="CDD:259850"
     Site            order(40..45,54,58,62,65,84,92,96,103..104,107,159,233,
                     239,241)
                     /site_type="active"
                     /db_xref="CDD:259850"
     Site            order(166..167,169..170,173..174,211..213,216,227,
                     238..242,245..247,249..253,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259850"
     CDS             1..289
                     /gene="LOC107951372"
                     /coded_by="XM_041085213.1:479..1348"
                     /db_xref="GeneID:107951372"
ORIGIN      
        1 merirerviq iygnlvsllq kcifcilsvg pipnhiafim dgnrrfakkc klmegaghkv
       61 gfsalmsmlk ycyefgvryv tvyafsienf krspeevqsl mdlmlkkiee ilkkqsivnr
      121 ygvrvifsgn lkllsepvrl aaeramlata knskavlsic vaytstneim havqesceek
      181 wdeitllnss gagyglislg gyeqdemdhl ikltdiekhm ymaaapdpdi iirtsgetrl
      241 snfllwqsan cylyspsvlw peigfrqflw ailnfqqihf yldklrkqs
//
LOCUS       XP_016741891             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrodolichyl diphosphate synthase CPT3 [Gossypium hirsutum].
ACCESSION   XP_016741891
VERSION     XP_016741891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrodolichyl diphosphate synthase CPT3"
                     /calculated_mol_wt=32978
     Region          35..277
                     /region_name="Cis_IPPS"
                     /note="Cis (Z)-Isoprenyl Diphosphate Synthases; cd00475"
                     /db_xref="CDD:259850"
     Site            order(40..45,54,58,62,65,84,92,96,103..104,107,159,233,
                     239,241)
                     /site_type="active"
                     /db_xref="CDD:259850"
     Site            order(166..167,169..170,173..174,211..213,216,227,
                     238..242,245..247,249..253,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259850"
     CDS             1..289
                     /gene="LOC107951372"
                     /coded_by="XM_016886402.2:596..1465"
                     /db_xref="GeneID:107951372"
ORIGIN      
        1 merirerviq iygnlvsllq kcifcilsvg pipnhiafim dgnrrfakkc klmegaghkv
       61 gfsalmsmlk ycyefgvryv tvyafsienf krspeevqsl mdlmlkkiee ilkkqsivnr
      121 ygvrvifsgn lkllsepvrl aaeramlata knskavlsic vaytstneim havqesceek
      181 wdeitllnss gagyglislg gyeqdemdhl ikltdiekhm ymaaapdpdi iirtsgetrl
      241 snfllwqsan cylyspsvlw peigfrqflw ailnfqqihf yldklrkqs
//
LOCUS       XP_016741889             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrodolichyl diphosphate synthase CPT3 [Gossypium hirsutum].
ACCESSION   XP_016741889
VERSION     XP_016741889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886400.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrodolichyl diphosphate synthase CPT3"
                     /calculated_mol_wt=32978
     Region          35..277
                     /region_name="Cis_IPPS"
                     /note="Cis (Z)-Isoprenyl Diphosphate Synthases; cd00475"
                     /db_xref="CDD:259850"
     Site            order(40..45,54,58,62,65,84,92,96,103..104,107,159,233,
                     239,241)
                     /site_type="active"
                     /db_xref="CDD:259850"
     Site            order(166..167,169..170,173..174,211..213,216,227,
                     238..242,245..247,249..253,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259850"
     CDS             1..289
                     /gene="LOC107951372"
                     /coded_by="XM_016886400.2:604..1473"
                     /db_xref="GeneID:107951372"
ORIGIN      
        1 merirerviq iygnlvsllq kcifcilsvg pipnhiafim dgnrrfakkc klmegaghkv
       61 gfsalmsmlk ycyefgvryv tvyafsienf krspeevqsl mdlmlkkiee ilkkqsivnr
      121 ygvrvifsgn lkllsepvrl aaeramlata knskavlsic vaytstneim havqesceek
      181 wdeitllnss gagyglislg gyeqdemdhl ikltdiekhm ymaaapdpdi iirtsgetrl
      241 snfllwqsan cylyspsvlw peigfrqflw ailnfqqihf yldklrkqs
//
LOCUS       XP_016741890             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrodolichyl diphosphate synthase CPT3 [Gossypium hirsutum].
ACCESSION   XP_016741890
VERSION     XP_016741890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrodolichyl diphosphate synthase CPT3"
                     /calculated_mol_wt=32978
     Region          35..277
                     /region_name="Cis_IPPS"
                     /note="Cis (Z)-Isoprenyl Diphosphate Synthases; cd00475"
                     /db_xref="CDD:259850"
     Site            order(40..45,54,58,62,65,84,92,96,103..104,107,159,233,
                     239,241)
                     /site_type="active"
                     /db_xref="CDD:259850"
     Site            order(166..167,169..170,173..174,211..213,216,227,
                     238..242,245..247,249..253,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259850"
     CDS             1..289
                     /gene="LOC107951372"
                     /coded_by="XM_016886401.2:710..1579"
                     /db_xref="GeneID:107951372"
ORIGIN      
        1 merirerviq iygnlvsllq kcifcilsvg pipnhiafim dgnrrfakkc klmegaghkv
       61 gfsalmsmlk ycyefgvryv tvyafsienf krspeevqsl mdlmlkkiee ilkkqsivnr
      121 ygvrvifsgn lkllsepvrl aaeramlata knskavlsic vaytstneim havqesceek
      181 wdeitllnss gagyglislg gyeqdemdhl ikltdiekhm ymaaapdpdi iirtsgetrl
      241 snfllwqsan cylyspsvlw peigfrqflw ailnfqqihf yldklrkqs
//
LOCUS       XP_040941148             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrodolichyl diphosphate synthase CPT3 [Gossypium hirsutum].
ACCESSION   XP_040941148
VERSION     XP_040941148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085214.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrodolichyl diphosphate synthase CPT3"
                     /calculated_mol_wt=32978
     Region          35..277
                     /region_name="Cis_IPPS"
                     /note="Cis (Z)-Isoprenyl Diphosphate Synthases; cd00475"
                     /db_xref="CDD:259850"
     Site            order(40..45,54,58,62,65,84,92,96,103..104,107,159,233,
                     239,241)
                     /site_type="active"
                     /db_xref="CDD:259850"
     Site            order(166..167,169..170,173..174,211..213,216,227,
                     238..242,245..247,249..253,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259850"
     CDS             1..289
                     /gene="LOC107951372"
                     /coded_by="XM_041085214.1:351..1220"
                     /db_xref="GeneID:107951372"
ORIGIN      
        1 merirerviq iygnlvsllq kcifcilsvg pipnhiafim dgnrrfakkc klmegaghkv
       61 gfsalmsmlk ycyefgvryv tvyafsienf krspeevqsl mdlmlkkiee ilkkqsivnr
      121 ygvrvifsgn lkllsepvrl aaeramlata knskavlsic vaytstneim havqesceek
      181 wdeitllnss gagyglislg gyeqdemdhl ikltdiekhm ymaaapdpdi iirtsgetrl
      241 snfllwqsan cylyspsvlw peigfrqflw ailnfqqihf yldklrkqs
//
LOCUS       XP_016741893             167 aa            linear   PLN 06-AUG-2024
DEFINITION  GPI-anchored protein LLG1 [Gossypium hirsutum].
ACCESSION   XP_016741893
VERSION     XP_016741893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..167
                     /product="GPI-anchored protein LLG1"
                     /calculated_mol_wt=17974
     CDS             1..167
                     /gene="LOC107951373"
                     /coded_by="XM_016886404.2:414..917"
                     /db_xref="GeneID:107951373"
ORIGIN      
        1 mginkllcwf avfffllgfs actsisdgvf dsltstgrhl lqakkacpvn feflnytiit
       61 sqckgpkypp qsccsafkef acpyaeqind lttecastmf syinlygkyp pglfasecre
      121 gkeglacpal spsasasase nangsqqlir npwmlvmaai iaaamll
//
LOCUS       XP_040941149             625 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941149
VERSION     XP_040941149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085215.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..625
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X1"
                     /calculated_mol_wt=71702
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..625
                     /gene="LOC121203105"
                     /coded_by="XM_041085215.1:229..2106"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyheqq kergy
//
LOCUS       XP_040941150             625 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941150
VERSION     XP_040941150.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085216.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..625
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X1"
                     /calculated_mol_wt=71702
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..625
                     /gene="LOC121203105"
                     /coded_by="XM_041085216.1:867..2744"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyheqq kergy
//
LOCUS       XP_040941152             625 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941152
VERSION     XP_040941152.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085218.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..625
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X1"
                     /calculated_mol_wt=71702
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..625
                     /gene="LOC121203105"
                     /coded_by="XM_041085218.1:450..2327"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyheqq kergy
//
LOCUS       XP_040941153             625 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941153
VERSION     XP_040941153.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085219.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..625
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X1"
                     /calculated_mol_wt=71702
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..625
                     /gene="LOC121203105"
                     /coded_by="XM_041085219.1:106..1983"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyheqq kergy
//
LOCUS       XP_040941154             625 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941154
VERSION     XP_040941154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085220.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..625
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X1"
                     /calculated_mol_wt=71702
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..625
                     /gene="LOC121203105"
                     /coded_by="XM_041085220.1:129..2006"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyheqq kergy
//
LOCUS       XP_040941155             623 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941155
VERSION     XP_040941155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085221.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..623
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X2"
                     /calculated_mol_wt=71515
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..623
                     /gene="LOC121203105"
                     /coded_by="XM_041085221.1:866..2737"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyhrrr lfc
//
LOCUS       XP_040941156             623 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941156
VERSION     XP_040941156.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085222.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..623
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X2"
                     /calculated_mol_wt=71515
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..623
                     /gene="LOC121203105"
                     /coded_by="XM_041085222.1:229..2100"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyhrrr lfc
//
LOCUS       XP_040941157             623 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941157
VERSION     XP_040941157.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085223.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..623
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X2"
                     /calculated_mol_wt=71515
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..623
                     /gene="LOC121203105"
                     /coded_by="XM_041085223.1:129..2000"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyhrrr lfc
//
LOCUS       XP_040941158             623 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941158
VERSION     XP_040941158.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085224.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..623
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X3"
                     /calculated_mol_wt=71444
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..623
                     /gene="LOC121203105"
                     /coded_by="XM_041085224.1:440..2311"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyhqke rgy
//
LOCUS       XP_040941159             623 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941159
VERSION     XP_040941159.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085225.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..623
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X2"
                     /calculated_mol_wt=71515
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..623
                     /gene="LOC121203105"
                     /coded_by="XM_041085225.1:450..2321"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvlhgtvmr
      601 qieisefldn iraseyhrrr lfc
//
LOCUS       XP_040941160             613 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941160
VERSION     XP_040941160.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085226.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..613
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X4"
                     /calculated_mol_wt=70174
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..613
                     /gene="LOC121203105"
                     /coded_by="XM_041085226.1:440..2281"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvwlnlvhl
      601 eksgftwysn aan
//
LOCUS       XP_040941161             613 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941161
VERSION     XP_040941161.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085227.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..613
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X4"
                     /calculated_mol_wt=70174
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..613
                     /gene="LOC121203105"
                     /coded_by="XM_041085227.1:440..2281"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvwlnlvhl
      601 eksgftwysn aan
//
LOCUS       XP_040941163             613 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941163
VERSION     XP_040941163.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085229.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..613
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X4"
                     /calculated_mol_wt=70174
     Region          76..123
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..314
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..613
                     /gene="LOC121203105"
                     /coded_by="XM_041085229.1:440..2281"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 msgveeigan desrdrrsdf dnsederrrs kignlkkkai nasnkfthsl kkrgkkkidy
       61 rapsvsiedv rdakeegavh elrqkllhkd llpprhddyh tllrflkare fniektiqmw
      121 eemlkwrqef gtdtiledfd feeleevlqy ypqgyhgvdk egrpvyierl gkahpsrlmk
      181 ittidrylky hvqefertls ekfpacsiaa krqicsttti ldvqglgmkn fsrtaanlla
      241 amtkidnsyy petlhrmyiv nagpgfkkml wpaaqkflda ktigkinvle pkslgrllei
      301 idssqlpdfl ggsctcsteg gclrsnkgpw ndpeimklvh naertfvrqi trvsndqhny
      361 esyvqirplk gmtsdtsaae seiddpcspt errssafpcl apvhedvrvs dpnayyscnd
      421 gfpmiektik sdqgllysld qlpscsnads qshrrasfys egipitswid nvkekfgrrn
      481 iqsfakllia llvrlaafir tvrleswrrp nnihpsnvig sstnshsnvt vpeavneedh
      541 vrpcierlqk lekafeelcn kpagipleke kmlmesldri kcveydldkt krvwlnlvhl
      601 eksgftwysn aan
//
LOCUS       XP_040941164             507 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH13
            isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941164
VERSION     XP_040941164.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085230.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..507
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH13 isoform X5"
                     /calculated_mol_wt=57908
     Region          29..196
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..507
                     /gene="LOC121203105"
                     /coded_by="XM_041085230.1:235..1758"
                     /db_xref="GeneID:121203105"
ORIGIN      
        1 mweemlkwrq efgtdtiled fdfeeleevl qyypqgyhgv dkegrpvyie rlgkahpsrl
       61 mkittidryl kyhvqefert lsekfpacsi aakrqicstt tildvqglgm knfsrtaanl
      121 laamtkidns yypetlhrmy ivnagpgfkk mlwpaaqkfl daktigkinv lepkslgrll
      181 eiidssqlpd flggsctcst eggclrsnkg pwndpeimkl vhnaertfvr qitrvsndqh
      241 nyesyvqirp lkgmtsdtsa aeseiddpcs pterrssafp clapvhedvr vsdpnayysc
      301 ndgfpmiekt iksdqgllys ldqlpscsna dsqshrrasf ysegipitsw idnvkekfgr
      361 rniqsfakll iallvrlaaf irtvrleswr rpnnihpsnv igsstnshsn vtvpeavnee
      421 dhvrpcierl qklekafeel cnkpagiple kekmlmesld rikcveydld ktkrvlhgtv
      481 mrqieisefl dniraseyhe qqkergy
//
LOCUS       XP_016675890             460 aa            linear   PLN 06-AUG-2024
DEFINITION  probable amino acid permease 7 [Gossypium hirsutum].
ACCESSION   XP_016675890
VERSION     XP_016675890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..460
                     /product="probable amino acid permease 7"
                     /calculated_mol_wt=50598
     Region          23..456
                     /region_name="Aa_trans"
                     /note="Transmembrane amino acid transporter protein;
                     pfam01490"
                     /db_xref="CDD:279788"
     CDS             1..460
                     /gene="LOC107895155"
                     /coded_by="XM_016820401.2:164..1546"
                     /db_xref="GeneID:107895155"
ORIGIN      
        1 meeahssnqt pllnkkhhnh lhrtgnvwta vahiitgvig agvlslawsm aqlgwiagpl
       61 amvlfasvtl istyllcncy ktpdpevgpv rnqsyidavn mnlgktnarv cglfvqvgly
      121 gmgiaytits aislraiqks ncyhneghna ecyfgdaqym lafgvvqlil sqinnfhniq
      181 wlsvvaaims faysiiglgl giakvvgngy ikgsirgist sttgekvwlv sqalgdisfa
      241 ypysliliei qdtlksppse kdtmktasii sisattffyl ccgalgyaaf gdktpgnllt
      301 gfgfyepywl idfanmcivl hlvggyqvys qplfanvekw vsvkfpdsgi ihkdfklklp
      361 llpafklnvl rlcfrtifva stttiamlfp yfnqvlgvlg giyfwplsiy fpvqmyfkqr
      421 nveawslkwv mlqsfsivcl pltlfalvgs ieglitarlk
//
LOCUS       XP_016675891             828 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division control protein 48 homolog C isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675891
VERSION     XP_016675891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..828
                     /product="cell division control protein 48 homolog C
                     isoform X1"
                     /calculated_mol_wt=91996
     Region          9..67
                     /region_name="Nucleolin_bd"
                     /note="Nucleolin binding domain; pfam16725"
                     /db_xref="CDD:465247"
     Region          <251..826
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..828
                     /gene="LOC107895156"
                     /coded_by="XM_016820402.2:66..2552"
                     /db_xref="GeneID:107895156"
ORIGIN      
        1 mvrrsggrrs pagsgvlnrk ilsrrlescq qthstveeiv dhlrtnypdy krmkqqpfti
       61 avrhalrsss kctqnpspsp snlnfdadsd ehehaiaass sssplhsrsr kkarvtdgke
      121 erlqhfeely iekrrnqryd sssnsdtdss ssseevdegv stsedavygq keepkfdlmk
      181 smlrqgynqs nntkpkleen nmemevaink tkdkidmtng rgtakkdaka sftaaadang
      241 mevngkegpr frdlggmkgv leelkmeviv plyhphlprw lgvrpmagil lhgppgcgkt
      301 klahaianet gvpfykisat evvsgvsgas eenirdlfsk ayrtapsivf ideidaiask
      361 renlqremer rivtqlmtcm deshrlvqpn dkdsslensd skpgyvlvig atnrpdavdp
      421 alrrpgrfdr eivlgvpden arleilsvlt gnlrlegsfd llkiaratpg fvgadlsala
      481 nkagnlamkr iidqrkhefs repiddeqad qwwrqpwlpd emeklaitma dfeeaakmvq
      541 pssrregfss ipnvtwenvg gldflrqefe ryivrrikfp eeyaefgvdl etgfllygpp
      601 gcgktliaka vaneaganfi hikgpellnk yvgeselavr tlfsrartcs pcilffdevd
      661 alttkrgkeg gwvverllnq llieldgadq rcgvfvigat nrpevmdrav lrpgrfgkll
      721 yvplpspder glilkalark kpvdesvdls aigrmeacen lsgadlsalm neaamvalyd
      781 klsstetsea sctiktchfe ralskispsv sdkqkqfykv lsesfkag
//
LOCUS       XP_040941165             763 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division control protein 48 homolog C isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941165
VERSION     XP_040941165.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085231.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..763
                     /product="cell division control protein 48 homolog C
                     isoform X2"
                     /calculated_mol_wt=85019
     Region          9..67
                     /region_name="Nucleolin_bd"
                     /note="Nucleolin binding domain; pfam16725"
                     /db_xref="CDD:465247"
     Region          <251..755
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..763
                     /gene="LOC107895156"
                     /coded_by="XM_041085231.1:67..2358"
                     /db_xref="GeneID:107895156"
ORIGIN      
        1 mvrrsggrrs pagsgvlnrk ilsrrlescq qthstveeiv dhlrtnypdy krmkqqpfti
       61 avrhalrsss kctqnpspsp snlnfdadsd ehehaiaass sssplhsrsr kkarvtdgke
      121 erlqhfeely iekrrnqryd sssnsdtdss ssseevdegv stsedavygq keepkfdlmk
      181 smlrqgynqs nntkpkleen nmemevaink tkdkidmtng rgtakkdaka sftaaadang
      241 mevngkegpr frdlggmkgv leelkmeviv plyhphlprw lgvrpmagil lhgppgcgkt
      301 klahaianet gvpfykisat evvsgvsgas eenirdlfsk ayrtapsivf ideidaiask
      361 renlqremer rivtqlmtcm deshrlvqpn dkdsslensd skpgyvlvig atnrpdavdp
      421 alrrpgrfdr eivlgvpden arleilsvlt gnlrlegsfd llkiaratpg fvgadlsala
      481 nkagnlamkr iidqrkhefs repiddeqad qwwrqpwlpd emeklaitma dfeeaakmvq
      541 pssrregfss ipnvtwenvg gldflrqefe ryivrrikfp eeyaefgvdl etgfllygpp
      601 gcgktliaka vaneaganfi hikgpellnk yvgeselavr tlfsrartcs pcilffdevd
      661 alttkrgkeg gwvverllnq llieldgadq rcgvfvigat nrpevmdrav lrpgrfgkll
      721 yvplpspder glilkalark kpvdesvdls aigrmeacen lne
//
LOCUS       XP_016675893             460 aa            linear   PLN 06-AUG-2024
DEFINITION  probable amino acid permease 7 [Gossypium hirsutum].
ACCESSION   XP_016675893
VERSION     XP_016675893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..460
                     /product="probable amino acid permease 7"
                     /calculated_mol_wt=50940
     Region          23..455
                     /region_name="Aa_trans"
                     /note="Transmembrane amino acid transporter protein;
                     pfam01490"
                     /db_xref="CDD:279788"
     CDS             1..460
                     /gene="LOC107895157"
                     /coded_by="XM_016820404.2:146..1528"
                     /db_xref="GeneID:107895157"
ORIGIN      
        1 mgeeednqls pllpssstss vkrtgtvwta vahiitgvig agvlslawst aqlgwiagpi
       61 svlvfaattl vstyilcdcn myphphygpn rlrsymdavl fylgeknhka cgvilmetly
      121 gstlayvits assikaiqks ncyhreghna pcsyedtssm llfgavqvvm sqipdfhnmk
      181 wlsmfaaims faysfigfgl glaqviengt ikgsingvpt aniadklwlv fqalgdiafa
      241 ypysvivlei qdtlkspppe nkimkkasii avslttffyl ccgcfgyaaf gnntpgnllt
      301 gfgfyepywl vdlanacivl hlvggyqifg qpvfafaerw finrfpnswf vnnyytnkhr
      361 wfpsfqinpl kicfrtayva tttaiammfp yfnqvlgvlg alnfwplaiy fpvemcivqk
      421 kiqswtrkwv vlksfsfvcl lvtivafigs iqglinakfe
//
LOCUS       XP_016675894             459 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar cation/proton exchanger 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675894
VERSION     XP_016675894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..459
                     /product="vacuolar cation/proton exchanger 3 isoform X1"
                     /calculated_mol_wt=50379
     Region          77..445
                     /region_name="caca2"
                     /note="calcium/proton exchanger; TIGR00846"
                     /db_xref="CDD:273297"
     CDS             1..459
                     /gene="LOC107895158"
                     /coded_by="XM_016820405.2:668..2047"
                     /db_xref="GeneID:107895158"
ORIGIN      
        1 mdyklqvgvq shleqmgsle drsmqdlhde clhspetdar knqttysnep lpfsdgrlpa
       61 gcnnmighgv yrsiktvvfs nklnllmpfg plailvhklt ahngwvfsls llgitplaer
      121 lgyateqlaf ytgptiggll natfgnatel iisiyalksg mtrvvqlsll gsilsnmllv
      181 lgcaffcggl vyhrkeqvfn kataivnsgl llmavmgllf pavlhythte rqygkselsl
      241 srfsscvmlv ayaaylvfql kgqndlyapi neenlddddd dddddddddd ddeapeiskw
      301 esgiwlvilt awisilsdyl vdtiqgasea wdvsiafisv illpiignaa ehasaimfam
      361 kdkldislgv aigsstqism fgipfcvvig wimgqemdln fqlfetatlf itvivvaffl
      421 qegtsnyfkg lmlilayliv aasffahedp tsanekkqp
//
LOCUS       XP_016675895             458 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar cation/proton exchanger 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675895
VERSION     XP_016675895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820406.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..458
                     /product="vacuolar cation/proton exchanger 5 isoform X2"
                     /calculated_mol_wt=50251
     Region          76..444
                     /region_name="caca2"
                     /note="calcium/proton exchanger; TIGR00846"
                     /db_xref="CDD:273297"
     CDS             1..458
                     /gene="LOC107895158"
                     /coded_by="XM_016820406.2:686..2062"
                     /db_xref="GeneID:107895158"
ORIGIN      
        1 mdyklqvgvq shlemgsled rsmqdlhdec lhspetdark nqttysnepl pfsdgrlpag
       61 cnnmighgvy rsiktvvfsn klnllmpfgp lailvhklta hngwvfslsl lgitplaerl
      121 gyateqlafy tgptigglln atfgnateli isiyalksgm trvvqlsllg silsnmllvl
      181 gcaffcgglv yhrkeqvfnk ataivnsgll lmavmgllfp avlhythter qygkselsls
      241 rfsscvmlva yaaylvfqlk gqndlyapin eenldddddd dddddddddd deapeiskwe
      301 sgiwlvilta wisilsdylv dtiqgaseaw dvsiafisvi llpiignaae hasaimfamk
      361 dkldislgva igsstqismf gipfcvvigw imgqemdlnf qlfetatlfi tvivvafflq
      421 egtsnyfkgl mlilayliva asffahedpt sanekkqp
//
LOCUS       XP_016675897             449 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome c oxidase assembly protein COX15 [Gossypium hirsutum].
ACCESSION   XP_016675897
VERSION     XP_016675897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820408.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..449
                     /product="cytochrome c oxidase assembly protein COX15"
                     /calculated_mol_wt=49502
     Region          86..432
                     /region_name="COX15-CtaA"
                     /note="Cytochrome oxidase assembly protein; cl19388"
                     /db_xref="CDD:473166"
     CDS             1..449
                     /gene="LOC107895159"
                     /coded_by="XM_016820408.2:348..1697"
                     /db_xref="GeneID:107895159"
ORIGIN      
        1 mfqsrvvasi lrrnkaiins lpsnlkgtcs srcftpssan avartsffgf rslpkghhvp
       61 sfrnmstvas vgteeeglkm lvtagpraqk mvgiwlfgsa awvfsmvvlg gvtrltrsgl
      121 smtdwkftgn lpplsddewq qefekykqsp eykrvnkgms iedfkfiywm eyahrmwgra
      181 lgmmfalpfs yflrkgyitm rlglrlsalf algagqglig wwmvksglee paseyveprv
      241 spyrlaahlt safviysglf wtalsvvmpe ppaeslawvq gaaklkrlai pvslivgita
      301 vsgafvagnd agrayntfpk mgdvwvpdni fdlkptirnl fentsmvqld hrilatttli
      361 sicglwwstk kldihpairt lvgatfgmaa lqvtlgvstl lsyvpvslgt ahqagaltll
      421 tlmlllnhtv rrpsmsllkt lpqvtktaw
//
LOCUS       XP_016675898             749 aa            linear   PLN 06-AUG-2024
DEFINITION  probable galactinol--sucrose galactosyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016675898
VERSION     XP_016675898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820409.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..749
                     /product="probable galactinol--sucrose
                     galactosyltransferase 1"
                     /calculated_mol_wt=83120
     Region          1..749
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     CDS             1..749
                     /gene="LOC107895160"
                     /coded_by="XM_016820409.2:247..2496"
                     /db_xref="GeneID:107895160"
ORIGIN      
        1 mtvgagicvs dngklmvlgn cvlhdvpdni vvlpasgdal adgafigvfs dktgcrrvfp
       61 vgklqglrfm cvfrfkmwwm tqrmgtcgqd ipfetqfliv eardcsgngd dsavyvvflp
      121 ilegdfravl qgnernelei clesgdpavd efegnhlvfv aagsdpfdvi tnavksvekh
      181 lqtfshrerk kmpdmlnwfg wctwdafytn vtseslkegl eslekggihp kfliiddgwq
      241 svamdshgte fradnaanfa nrltnikenh kfqkdgkegh rvedpalglr hivteikqkh
      301 alkyayvwha itgywggvrp dvtemehyes kvvypisspg vesnepdqal dsitknglgl
      361 vnpekvfnfy delhaylata gidgvkvdvq niletlgagh ggrvklarky hqaleasiar
      421 nfanndiisc mshntdglys akrtaviras ddfwprdpas htihiasvay ntvflgefmq
      481 pdwdmfhslh pmaeyhgaar avggcaiyvs dkpgqhdfdl lkklvlpdgs ilraklpgrp
      541 trdclfsdpa rdgksllkiw nlneftgvmg vfncqgagwc rvgktniihd kqpdtitgyv
      601 rardvdylpk vagdewngds viyshlggel tylpndatmp itlkarqyev ftvvpvkils
      661 ngckfapigl ikmfnsggai kelryhhani dmkirgcgmf gayssirpkr itveteevsf
      721 eyedasglvt lslrvpeeel yvwslaiev
//
LOCUS       XP_016675899             410 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DNA-DAMAGE INDUCIBLE 1 [Gossypium hirsutum].
ACCESSION   XP_016675899
VERSION     XP_016675899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820410.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..410
                     /product="protein DNA-DAMAGE INDUCIBLE 1"
                     /calculated_mol_wt=44738
     Region          1..69
                     /region_name="Ubl_Ddi1_like"
                     /note="ubiquitin-like (Ubl) domain found in the eukaryotic
                     Ddi1 family; cd01796"
                     /db_xref="CDD:340494"
     Region          183..306
                     /region_name="RP_DDI"
                     /note="retropepsin-like domain of DNA damage inducible
                     protein; cd05479"
                     /db_xref="CDD:133146"
     Site            215..217
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133146"
     Site            215
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133146"
     Region          373..408
                     /region_name="UBA_scDdi1_like"
                     /note="UBA domain found in Saccharomyces cerevisiae
                     DNA-damage response protein Ddi1 and similar proteins;
                     cd14309"
                     /db_xref="CDD:270494"
     CDS             1..410
                     /gene="LOC107895161"
                     /coded_by="XM_016820410.2:192..1424"
                     /db_xref="GeneID:107895161"
ORIGIN      
        1 mritvmtade qilsldvdph etvenlkall evetmvplqq qqllfngrem nnseklsalg
       61 vkdddlvmmv sgvassgsas rndlslnpdg savnpaafqq qirqdsnlig qlfqtdpela
      121 qavvgndlnk lqeilrarhq rrselrqqee eelallqadp fdveaqkkie aairqkgide
      181 nwaaaleynp egfarvvmly vdmevngvpl kafvdsgaqs tiiskscaer cgllrlmdqr
      241 ykgiahgvgq seilgrihva pikigeifyp csflvldspn meflfgldml rkhqciidlk
      301 nnvlrvggge vsvpflqekd ipsrfldeer hakqasssga svkngttkna nvpsggqssg
      361 gargdathkp efeakvakli elgfaremvi ealklcdgne eqaagilfgg
//
LOCUS       XP_016675901             223 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein pno1 [Gossypium hirsutum].
ACCESSION   XP_016675901
VERSION     XP_016675901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820412.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="RNA-binding protein pno1"
                     /calculated_mol_wt=25071
     Region          44..123
                     /region_name="KH-I_PNO1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22391"
                     /db_xref="CDD:411819"
     Site            order(44..45,47..48,56..57,59..60,63,67,71,73,75..83,88,
                     90,94,98..99,102,106,116,118..119,121..122)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411819"
     Site            order(53..58,82,85)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411819"
     Region          125..220
                     /region_name="KH-I_PNO1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22392"
                     /db_xref="CDD:411820"
     Site            order(125..130,132..133,138..141,148..149,158,160,163,
                     166..167,170..172,183,186,193,197..198,201,220)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411820"
     Site            order(146,148..149,151..153,155..159,161..163,175,190,
                     202..205,207,209,213)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411820"
     CDS             1..223
                     /gene="LOC107895162"
                     /coded_by="XM_016820412.2:353..1024"
                     /db_xref="GeneID:107895162"
ORIGIN      
        1 msteaptsme tetvasktkl esntlppkpk feplkahems dgriqfrkvs vpphrysplk
       61 kywmdiytpi yeqmkvdirm nlkarkvelk trsdtpdvsn lqkcadfvqa fmlgfdvpda
      121 iallrldely vesfeikdvk tlrgehlsra igrlsgkggk tkfaienatk triviadtki
      181 hilgsfanik iardslcnli lgspagkvys klrqvtarla erf
//
LOCUS       XP_016675902             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675902
VERSION     XP_016675902.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820413.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..767
                     /product="protein CLMP1 isoform X1"
                     /calculated_mol_wt=84539
     Region          <44..186
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          46..74
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(47,50..51,54..55,57,85,88..89,92..93,95..96,121,
                     124..125,128..129,132)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          83..115
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          120..147
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          290..382
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(294,300..302,318,376)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(294,301..303,318,322,376)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(294,322)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(335,348)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(335,348)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(335,348)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(335,348)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107895163"
                     /coded_by="XM_016820413.2:257..2560"
                     /db_xref="GeneID:107895163"
ORIGIN      
        1 mgksggrkkk gglnanqvsv dnnssnknsh vnggvdldss vfskranelk eegnvkyqnk
       61 dymaalqlyd nalrlipkth pdravfhsnr aaclmqmkpi dydaviaecn maiqaqplyv
      121 rallrraraf eavgkyemam qdvqlllgae pnnkdaleig rrlrtalgpr leaqqdlqsr
      181 pspaalgasa vrgapiaglg pclparpvpk ktstsppqgs avspnnkldk hqmnvapetg
      241 sknknqlpkl mlkpcsgssk atdnpnkdgl reksfstsmr gqvpevaiqw rplklvydhd
      301 irlsqmpvnc sfkvlreivs krfpssksvl ikykdndgdl vtitcttelr laessvdalv
      361 piepqadkts gfgtlrlhiv evspeqeppl peeevekple sqgaksdesv shsslgdsvs
      421 egvdveiekt ekesskgkig anedpeckev emddwlfefa qlfrtnvgid pdahidlhel
      481 gmehcseale etvtseeaqi lfdkaaakfq evaalaffnw gnvhmcsark ripldesagk
      541 evvseklqta ydwvgekysl arekyaeals ikpdfyegll algqqhfema klnwsfalak
      601 kidlstwdpa etlqlfnsae emmkdatemw ekleqqrvne lkdpnsgkke ellkikkklg
      661 sgaenelpgt gnqcelsaee vaeqaavmrs qihlfwgnml fersqveckl gmdgwkknln
      721 taverfklag aseadistvl knhcsngdav egdekkvvgd vnqisdk
//
LOCUS       XP_040941167             705 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941167
VERSION     XP_040941167.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085233.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..705
                     /product="protein CLMP1 isoform X2"
                     /calculated_mol_wt=77857
     Region          <2..124
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          21..53
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          58..85
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          228..320
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(232,238..240,256,314)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(232,239..241,256,260,314)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(232,260)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(273,286)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(273,286)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(273,286)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(273,286)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..705
                     /gene="LOC107895163"
                     /coded_by="XM_041085233.1:229..2346"
                     /db_xref="GeneID:107895163"
ORIGIN      
        1 maalqlydna lrlipkthpd ravfhsnraa clmqmkpidy daviaecnma iqaqplyvra
       61 llrrarafea vgkyemamqd vqlllgaepn nkdaleigrr lrtalgprle aqqdlqsrps
      121 paalgasavr gapiaglgpc lparpvpkkt stsppqgsav spnnkldkhq mnvapetgsk
      181 nknqlpklml kpcsgsskat dnpnkdglre ksfstsmrgq vpevaiqwrp lklvydhdir
      241 lsqmpvncsf kvlreivskr fpssksvlik ykdndgdlvt itcttelrla essvdalvpi
      301 epqadktsgf gtlrlhivev speqepplpe eevekplesq gaksdesvsh sslgdsvseg
      361 vdveiektek esskgkigan edpeckevem ddwlfefaql frtnvgidpd ahidlhelgm
      421 ehcsealeet vtseeaqilf dkaaakfqev aalaffnwgn vhmcsarkri pldesagkev
      481 vseklqtayd wvgekyslar ekyaealsik pdfyegllal gqqhfemakl nwsfalakki
      541 dlstwdpaet lqlfnsaeem mkdatemwek leqqrvnelk dpnsgkkeel lkikkklgsg
      601 aenelpgtgn qcelsaeeva eqaavmrsqi hlfwgnmlfe rsqvecklgm dgwkknlnta
      661 verfklagas eadistvlkn hcsngdaveg dekkvvgdvn qisdk
//
LOCUS       XP_016675906             479 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675906
VERSION     XP_016675906.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820417.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..479
                     /product="uridine kinase-like protein 3 isoform X1"
                     /calculated_mol_wt=53810
     Region          49..247
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(61,184,232)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(82,104,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(85,101,130,132,135,193)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          265..467
                     /region_name="UPRTase"
                     /note="Uracil phosphoribosyltransferase; pfam14681"
                     /db_xref="CDD:434124"
     Site            order(335,337,388..390,392..396,422)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..479
                     /gene="LOC107895166"
                     /coded_by="XM_016820417.1:166..1605"
                     /db_xref="GeneID:107895166"
ORIGIN      
        1 mdsksvedmi egssgfhfsg fhmdgsklnn iekptttlai envhkqpfii gvaggaasgk
       61 ttvcdmiiqq lhdqrvvlvn qdsfyhklte eelatvheyn fdhpdsfdte klldsmenlr
      121 hgqavdipny dfksyknsvf parrvnpsdv iilegilifh dprvrelmnm kifvdtdadv
      181 rlarrirrdt vekgrdigvv ldqyskfvks afddfilptk kyadiiiprg gdnhvaidli
      241 vqhirtklgq hdlckiypnl yviqstfqir gmhtlirdsq ttkhdfvfya drlirlvveh
      301 glghlpftek qvitptgsvy tgvdfckrlc gvsvirsges menalracck gikigkilih
      361 regedngqql iyeklpqdis erhvllldpi lgtgntavka isllirkgvp esniiflnli
      421 sapqgvhvvc ksfprvkivt seidiglnee frvipgmgef gdryfgtddd dlqvvppsq
//
LOCUS       XP_016675907             479 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675907
VERSION     XP_016675907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820418.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..479
                     /product="uridine kinase-like protein 3 isoform X1"
                     /calculated_mol_wt=53810
     Region          49..247
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(61,184,232)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(82,104,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(85,101,130,132,135,193)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          265..467
                     /region_name="UPRTase"
                     /note="Uracil phosphoribosyltransferase; pfam14681"
                     /db_xref="CDD:434124"
     Site            order(335,337,388..390,392..396,422)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..479
                     /gene="LOC107895166"
                     /coded_by="XM_016820418.2:178..1617"
                     /db_xref="GeneID:107895166"
ORIGIN      
        1 mdsksvedmi egssgfhfsg fhmdgsklnn iekptttlai envhkqpfii gvaggaasgk
       61 ttvcdmiiqq lhdqrvvlvn qdsfyhklte eelatvheyn fdhpdsfdte klldsmenlr
      121 hgqavdipny dfksyknsvf parrvnpsdv iilegilifh dprvrelmnm kifvdtdadv
      181 rlarrirrdt vekgrdigvv ldqyskfvks afddfilptk kyadiiiprg gdnhvaidli
      241 vqhirtklgq hdlckiypnl yviqstfqir gmhtlirdsq ttkhdfvfya drlirlvveh
      301 glghlpftek qvitptgsvy tgvdfckrlc gvsvirsges menalracck gikigkilih
      361 regedngqql iyeklpqdis erhvllldpi lgtgntavka isllirkgvp esniiflnli
      421 sapqgvhvvc ksfprvkivt seidiglnee frvipgmgef gdryfgtddd dlqvvppsq
//
LOCUS       XP_016675909             467 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675909
VERSION     XP_016675909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820420.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..467
                     /product="uridine kinase-like protein 4 isoform X2"
                     /calculated_mol_wt=52905
     Region          49..247
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(61,184,232)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(82,104,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(85,101,130,132,135,193)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          265..455
                     /region_name="UPRTase"
                     /note="Uracil phosphoribosyltransferase; pfam14681"
                     /db_xref="CDD:434124"
     Site            order(376..378,380..384,410)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..467
                     /gene="LOC107895166"
                     /coded_by="XM_016820420.2:168..1571"
                     /db_xref="GeneID:107895166"
ORIGIN      
        1 mdsksvedmi egssgfhfsg fhmdgsklnn iekptttlai envhkqpfii gvaggaasgk
       61 ttvcdmiiqq lhdqrvvlvn qdsfyhklte eelatvheyn fdhpdsfdte klldsmenlr
      121 hgqavdipny dfksyknsvf parrvnpsdv iilegilifh dprvrelmnm kifvdtdadv
      181 rlarrirrdt vekgrdigvv ldqyskfvks afddfilptk kyadiiiprg gdnhvaidli
      241 vqhirtklgq hdlckiypnl yviqstfqir gmhtlirdsq ttkhdfvfya drlirlvveh
      301 glghlpftek qglsilvwis vrgyavyqll evvrvwrmlc ehvakgsrla rflfigkliy
      361 eklpqdiser hvllldpilg tgntavkais llirkgvpes niiflnlisa pqgvhvvcks
      421 fprvkivtse idiglneefr vipgmgefgd ryfgtddddl qvvppsq
//
LOCUS       XP_016675910             462 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016675910
VERSION     XP_016675910.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820421.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..462
                     /product="uridine kinase-like protein 4 isoform X3"
                     /calculated_mol_wt=51822
     Region          49..230
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(61,184,215)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(82,104,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(85,101,130,132,135,193)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          248..450
                     /region_name="UPRTase"
                     /note="Uracil phosphoribosyltransferase; pfam14681"
                     /db_xref="CDD:434124"
     Site            order(318,320,371..373,375..379,405)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..462
                     /gene="LOC107895166"
                     /coded_by="XM_016820421.1:166..1554"
                     /db_xref="GeneID:107895166"
ORIGIN      
        1 mdsksvedmi egssgfhfsg fhmdgsklnn iekptttlai envhkqpfii gvaggaasgk
       61 ttvcdmiiqq lhdqrvvlvn qdsfyhklte eelatvheyn fdhpdsfdte klldsmenlr
      121 hgqavdipny dfksyknsvf parrvnpsdv iilegilifh dprvrelmnm kifvdtdadv
      181 rlarrirrdt vekgrdigvv ldqkyadiii prggdnhvai dlivqhirtk lgqhdlckiy
      241 pnlyviqstf qirgmhtlir dsqttkhdfv fyadrlirlv vehglghlpf tekqvitptg
      301 svytgvdfck rlcgvsvirs gesmenalra cckgikigki lihregedng qqliyeklpq
      361 diserhvlll dpilgtgnta vkaisllirk gvpesniifl nlisapqgvh vvcksfprvk
      421 ivtseidigl neefrvipgm gefgdryfgt ddddlqvvpp sq
//
LOCUS       XP_040941169             401 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 3 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941169
VERSION     XP_040941169.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085235.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..401
                     /product="uridine kinase-like protein 3 isoform X4"
                     /calculated_mol_wt=45432
     Region          2..169
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(4,26,107)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(7,23,52,54,57,115)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          187..389
                     /region_name="UPRTase"
                     /note="Uracil phosphoribosyltransferase; pfam14681"
                     /db_xref="CDD:434124"
     Site            order(257,259,310..312,314..318,344)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..401
                     /gene="LOC107895166"
                     /coded_by="XM_041085235.1:134..1339"
                     /db_xref="GeneID:107895166"
ORIGIN      
        1 mcqdsfyhkl teeelatvhe ynfdhpdsfd teklldsmen lrhgqavdip nydfksykns
       61 vfparrvnps dviilegili fhdprvrelm nmkifvdtda dvrlarrirr dtvekgrdig
      121 vvldqyskfv ksafddfilp tkkyadiiip rggdnhvaid livqhirtkl gqhdlckiyp
      181 nlyviqstfq irgmhtlird sqttkhdfvf yadrlirlvv ehglghlpft ekqvitptgs
      241 vytgvdfckr lcgvsvirsg esmenalrac ckgikigkil ihregedngq qliyeklpqd
      301 iserhvllld pilgtgntav kaisllirkg vpesniifln lisapqgvhv vcksfprvki
      361 vtseidigln eefrvipgmg efgdryfgtd dddlqvvpps q
//
LOCUS       XP_016675912             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 3 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016675912
VERSION     XP_016675912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820423.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="uridine kinase-like protein 3 isoform X5"
                     /calculated_mol_wt=45779
     Region          49..247
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(61,184,232)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(82,104,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(85,101,130,132,135,193)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          265..>311
                     /region_name="PRTases_typeI"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     cl00309"
                     /db_xref="CDD:444823"
     CDS             1..399
                     /gene="LOC107895166"
                     /coded_by="XM_016820423.2:169..1368"
                     /db_xref="GeneID:107895166"
ORIGIN      
        1 mdsksvedmi egssgfhfsg fhmdgsklnn iekptttlai envhkqpfii gvaggaasgk
       61 ttvcdmiiqq lhdqrvvlvn qdsfyhklte eelatvheyn fdhpdsfdte klldsmenlr
      121 hgqavdipny dfksyknsvf parrvnpsdv iilegilifh dprvrelmnm kifvdtdadv
      181 rlarrirrdt vekgrdigvv ldqyskfvks afddfilptk kyadiiiprg gdnhvaidli
      241 vqhirtklgq hdlckiypnl yviqstfqir gmhtlirdsq ttkhdfvfya drlirlvveh
      301 glghlpftek qglsilvwis vrgyavyqll evvrvwrmlc ehvakgsrla rflfigkvrt
      361 tvsslfmkny hktsqkgmcc ywilfsarai qlsklfhyl
//
LOCUS       XP_016675904             357 aa            linear   PLN 06-AUG-2024
DEFINITION  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [Gossypium
            hirsutum].
ACCESSION   XP_016675904
VERSION     XP_016675904.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820415.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..357
                     /product="fructose-bisphosphate aldolase, cytoplasmic
                     isozyme 1"
                     /calculated_mol_wt=38300
     Region          1..357
                     /region_name="PLN02455"
                     /note="fructose-bisphosphate aldolase"
                     /db_xref="CDD:178074"
     Site            order(30..32,35,103,142,144,183,225,265..267,295,297..298)
                     /site_type="active"
                     /db_xref="CDD:188635"
     Site            order(106,157,160..161,164,168,171,199,203,206,213..214,
                     216,220,252..253,255)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:188635"
     Site            225
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188635"
     CDS             1..357
                     /gene="LOC107895164"
                     /coded_by="XM_016820415.2:363..1436"
                     /db_xref="GeneID:107895164"
ORIGIN      
        1 msafvgkyae eliknakyia tpgkgilaad estgtigkrl ssinvenies nrqalrellf
       61 tspnalscls gvilfeetly qktsdgkpfv eileennvip gikvdkgtve iagtngettt
      121 qgfdslgarc qqyykagarf akwravlkig pnepselaiq qnaqglarya iicqenglvp
      181 ivepevltdg phdikkcaav tetvlaavyk alndhhvlle gtllkpnmvt pgsdslkeap
      241 eviaqytvta lrrtvppavp givflsggqs eeeatqnlda mnklevlkpw tlsfsfgral
      301 qqstlktwag kkanvrkaqe aflsrckans eatlgkysgg sagglasesl fvkgyky
//
LOCUS       XP_016675905             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g26485 [Gossypium hirsutum].
ACCESSION   XP_016675905
VERSION     XP_016675905.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820416.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="uncharacterized protein At4g26485"
                     /calculated_mol_wt=35429
     Region          123..287
                     /region_name="BMT5-like"
                     /note="rRNA (uridine-N3-)-methyltransferase BTM5-like;
                     pfam10354"
                     /db_xref="CDD:463056"
     CDS             1..314
                     /gene="LOC107895165"
                     /coded_by="XM_016820416.2:302..1246"
                     /db_xref="GeneID:107895165"
ORIGIN      
        1 mdqiisfiqk glvglvfypf krlrsrqsve ssedledpke qctllistpe lsddpscnse
       61 sdtdtifrlh qnvgttcidi vgdnsrqdsd vcvvnvenlg grqlvgagei rwirhycssq
      121 rmllvgegdf sfsaslaraf gsatnmiats ldsrgflfrn ykkaianihe lrvrgcivlh
      181 gidateianh cylgafkfdr iifnfphagf csdepgesqr rrhqllislf lknakemiee
      241 rgeihvthks nrffrdwnlr glaaavglrl iqevpfnftd yrgyrtkygf ggdnnfncnp
      301 sktykfglfp imsp
//
LOCUS       XP_040941170             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g26485 [Gossypium hirsutum].
ACCESSION   XP_040941170
VERSION     XP_040941170.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085236.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="uncharacterized protein At4g26485"
                     /calculated_mol_wt=35429
     Region          123..287
                     /region_name="BMT5-like"
                     /note="rRNA (uridine-N3-)-methyltransferase BTM5-like;
                     pfam10354"
                     /db_xref="CDD:463056"
     CDS             1..314
                     /gene="LOC107895165"
                     /coded_by="XM_041085236.1:760..1704"
                     /db_xref="GeneID:107895165"
ORIGIN      
        1 mdqiisfiqk glvglvfypf krlrsrqsve ssedledpke qctllistpe lsddpscnse
       61 sdtdtifrlh qnvgttcidi vgdnsrqdsd vcvvnvenlg grqlvgagei rwirhycssq
      121 rmllvgegdf sfsaslaraf gsatnmiats ldsrgflfrn ykkaianihe lrvrgcivlh
      181 gidateianh cylgafkfdr iifnfphagf csdepgesqr rrhqllislf lknakemiee
      241 rgeihvthks nrffrdwnlr glaaavglrl iqevpfnftd yrgyrtkygf ggdnnfncnp
      301 sktykfglfp imsp
//
LOCUS       XP_016675471             131 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675471
VERSION     XP_016675471.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819982.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675471.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..131
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14892
     CDS             1..131
                     /gene="LOC107894747"
                     /coded_by="XM_016819982.2:262..657"
                     /db_xref="GeneID:107894747"
ORIGIN      
        1 mkmitcdrat ydaavmahkk yepflnksid hynemalvvg kdmaigsfar tfadidlddd
       61 nidsvpidce neateevrtn vsssgtsnvk ekrlkkvsmm nklnlwvnnl akllmlwnnl
      121 lqirhhiftk k
//
LOCUS       XP_016675914             699 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock cognate protein 80 [Gossypium hirsutum].
ACCESSION   XP_016675914
VERSION     XP_016675914.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820425.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..699
                     /product="heat shock cognate protein 80"
                     /calculated_mol_wt=80012
     Region          4..699
                     /region_name="HSP90"
                     /note="Hsp90 protein; cl46693"
                     /db_xref="CDD:481033"
     CDS             1..699
                     /gene="LOC107895167"
                     /coded_by="XM_016820425.2:291..2390"
                     /db_xref="GeneID:107895167"
ORIGIN      
        1 madtetfafq aeinqllsli intfysnkei flreiisnas daldkirfes ltdkskldaq
       61 pelfihivpd ktnntlsiid sgvgmtkadl vnnlgtiars gtkefmeala agadvsmigq
      121 fgvgfysayl vaervvvttk hnddeqyvwe sqaggsftvt rdtsgeklgr gtkitlflke
      181 dqleyleerr lkdlikkhse fisypislwi ekttekeisd dedeedkkde egkvedvdee
      241 kekeekkkkk ikevshewsl vnkqkpiwmr kpeeitkeey aafyksltnd weehlavkhf
      301 svegqlefka ilfvpkrapf dlfdtrkkpn niklyvrrvf imdnceelip eflsfvkgiv
      361 dsedlplnis remlqqnkil kvirknlvkk cielffeiae nkedynkfye afsknlklgi
      421 hedsqnrnki aellryhstk sgdemtslkd yvtrmkegqn diyyitgesk kavenspfle
      481 klkkkgyevl ymvdaideya igqlkefegk klvsatkegl kldesedekk kkealkekfe
      541 glckvikdvl gdkvekvmvs drvvdspccl vtgeygwtan merimkaqal rdnsmagyms
      601 skktmeinpe npimeelrkr adadkndksv kdlvlllfet alltsgfsld dpntfgnrih
      661 rmlklglsid edagdadads emppledada egskmeevd
//
LOCUS       XP_016675915             226 aa            linear   PLN 06-AUG-2024
DEFINITION  calcineurin B-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016675915
VERSION     XP_016675915.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820426.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..226
                     /product="calcineurin B-like protein 3"
                     /calculated_mol_wt=25849
     Region          64..192
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..226
                     /gene="LOC107895168"
                     /coded_by="XM_016820426.2:334..1014"
                     /db_xref="GeneID:107895168"
ORIGIN      
        1 mlqcldglkh lfasvlhccd idlckqsrgl edpellaret vfsvseieal yelfkkissa
       61 viddglinke efqlalfktn kkeslfadrv fdlfdtkhng mlgfeefara lsvfhpnapi
      121 ddkidfsfql ydlkqqgfie rqevkqmvva tlaesgmnls ddviesiidk tfeeadtkhd
      181 gridkeewrs lvlrhpsllk nmtlqylkdi tttfpsfvfh sqvddt
//
LOCUS       XP_040941172             226 aa            linear   PLN 06-AUG-2024
DEFINITION  calcineurin B-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941172
VERSION     XP_040941172.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085238.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..226
                     /product="calcineurin B-like protein 3"
                     /calculated_mol_wt=25849
     Region          64..192
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..226
                     /gene="LOC107895168"
                     /coded_by="XM_041085238.1:264..944"
                     /db_xref="GeneID:107895168"
ORIGIN      
        1 mlqcldglkh lfasvlhccd idlckqsrgl edpellaret vfsvseieal yelfkkissa
       61 viddglinke efqlalfktn kkeslfadrv fdlfdtkhng mlgfeefara lsvfhpnapi
      121 ddkidfsfql ydlkqqgfie rqevkqmvva tlaesgmnls ddviesiidk tfeeadtkhd
      181 gridkeewrs lvlrhpsllk nmtlqylkdi tttfpsfvfh sqvddt
//
LOCUS       XP_040941173             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941173
VERSION     XP_040941173.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085239.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19069
     CDS             1..170
                     /gene="LOC107893515"
                     /coded_by="XM_041085239.1:391..903"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 memdfimstr asnltrqllp skhsffires rsgvrhtnil lkgsilrtfg inyftygfle
       61 pkgwsepldf lacsfllefp lceslciwts cvcslysvcl slnvslasie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffycsvipva
//
LOCUS       XP_040941174             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941174
VERSION     XP_040941174.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085240.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19069
     CDS             1..170
                     /gene="LOC107893515"
                     /coded_by="XM_041085240.1:454..966"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 memdfimstr asnltrqllp skhsffires rsgvrhtnil lkgsilrtfg inyftygfle
       61 pkgwsepldf lacsfllefp lceslciwts cvcslysvcl slnvslasie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffycsvipva
//
LOCUS       XP_040941176             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941176
VERSION     XP_040941176.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085242.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19069
     CDS             1..170
                     /gene="LOC107893515"
                     /coded_by="XM_041085242.1:251..763"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 memdfimstr asnltrqllp skhsffires rsgvrhtnil lkgsilrtfg inyftygfle
       61 pkgwsepldf lacsfllefp lceslciwts cvcslysvcl slnvslasie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffycsvipva
//
LOCUS       XP_040941177             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941177
VERSION     XP_040941177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085243.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..162
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=18120
     CDS             1..162
                     /gene="LOC107893515"
                     /coded_by="XM_041085243.1:334..822"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 meqqnmepct pciykfgiqh dirsgvrhtn illkgsilrt fginyftygf lepkgwsepl
       61 dflacsflle fplceslciw tscvcslysv clslnvslas iewlashfnc smylnvslas
      121 ielaqvtiel iavsiltcyl rlvafcnllk giffycsvip va
//
LOCUS       XP_016674024             105 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016674024
VERSION     XP_016674024.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818535.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674024.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..105
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X3"
                     /calculated_mol_wt=11676
     CDS             1..105
                     /gene="LOC107893515"
                     /coded_by="XM_016818535.2:437..754"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 memdfimstr asnltrqllp skhsffires rsgvrhtnil lkgsilrtfg inyftygfle
       61 pkgwseplgm imgaaastdk tctgleqvnq eallelnsqv ivicf
//
LOCUS       XP_016674025              98 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_016674025
VERSION     XP_016674025.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818536.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674025.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X4"
                     /calculated_mol_wt=11169
     CDS             1..98
                     /gene="LOC107893515"
                     /coded_by="XM_016818536.2:437..733"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 memdfimstr asnltrqllp skhsffires rsgvrhtnil lkgsilrtfg inyftygfle
       61 pkgwsepldf lacsfllefp lceslciwts cvcslysv
//
LOCUS       XP_040941178              98 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040941178
VERSION     XP_040941178.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085244.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X4"
                     /calculated_mol_wt=11169
     CDS             1..98
                     /gene="LOC107893515"
                     /coded_by="XM_041085244.1:391..687"
                     /db_xref="GeneID:107893515"
ORIGIN      
        1 memdfimstr asnltrqllp skhsffires rsgvrhtnil lkgsilrtfg inyftygfle
       61 pkgwsepldf lacsfllefp lceslciwts cvcslysv
//
LOCUS       XP_040941179             342 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941179
VERSION     XP_040941179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085245.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="E3 ubiquitin-protein ligase At4g11680 isoform
                     X1"
                     /calculated_mol_wt=39381
     Region          295..336
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(296,299,314,316,319,322,333,336)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438124"
     CDS             1..342
                     /gene="LOC107893514"
                     /coded_by="XM_041085245.1:848..1876"
                     /db_xref="GeneID:107893514"
ORIGIN      
        1 mntrysfqpd slctsstavp fssnphgvee rvvvgmrnrp prappssili rtamrisrar
       61 wfnllrrvfh yqngsrsdlg snpfnsstwm mleflalviq isiiaftlai sneerpiwpm
      121 riwivgydig cvlsllllyg nyhlqitqgn rfglsdieqq rtseesrssh lmnkcrtsle
      181 lffaiwfvmg nvwvfdsrfr sfhrapnlhv lcisllawna lsysfpfllf lllcccvpli
      241 ssllgynmnm gsiergasdd qisrlpswry keintnldld hdltcdtsqa nedpeccicl
      301 anykdkeevr qlpcshifhl rcvdqwlrii sccplckqel dr
//
LOCUS       XP_040941180             307 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941180
VERSION     XP_040941180.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085246.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..307
                     /product="E3 ubiquitin-protein ligase At4g11680 isoform
                     X2"
                     /calculated_mol_wt=35598
     Region          260..301
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(261,264,279,281,284,287,298,301)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..307
                     /gene="LOC107893514"
                     /coded_by="XM_041085246.1:430..1353"
                     /db_xref="GeneID:107893514"
ORIGIN      
        1 mrnrpprapp ssilirtamr israrwfnll rrvfhyqngs rsdlgsnpfn sstwmmlefl
       61 alviqisiia ftlaisneer piwpmriwiv gydigcvlsl lllygnyhlq itqgnrfgls
      121 dieqqrtsee srsshlmnkc rtslelffai wfvmgnvwvf dsrfrsfhra pnlhvlcisl
      181 lawnalsysf pfllflllcc cvplissllg ynmnmgsier gasddqisrl pswrykeint
      241 nldldhdltc dtsqanedpe cciclanykd keevrqlpcs hifhlrcvdq wlriisccpl
      301 ckqeldr
//
LOCUS       XP_040941182             307 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941182
VERSION     XP_040941182.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085248.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..307
                     /product="E3 ubiquitin-protein ligase At4g11680 isoform
                     X2"
                     /calculated_mol_wt=35598
     Region          260..301
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(261,264,279,281,284,287,298,301)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..307
                     /gene="LOC107893514"
                     /coded_by="XM_041085248.1:414..1337"
                     /db_xref="GeneID:107893514"
ORIGIN      
        1 mrnrpprapp ssilirtamr israrwfnll rrvfhyqngs rsdlgsnpfn sstwmmlefl
       61 alviqisiia ftlaisneer piwpmriwiv gydigcvlsl lllygnyhlq itqgnrfgls
      121 dieqqrtsee srsshlmnkc rtslelffai wfvmgnvwvf dsrfrsfhra pnlhvlcisl
      181 lawnalsysf pfllflllcc cvplissllg ynmnmgsier gasddqisrl pswrykeint
      241 nldldhdltc dtsqanedpe cciclanykd keevrqlpcs hifhlrcvdq wlriisccpl
      301 ckqeldr
//
LOCUS       XP_016674020             230 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CWC15 homolog A [Gossypium hirsutum].
ACCESSION   XP_016674020
VERSION     XP_016674020.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818531.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674020.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..230
                     /product="protein CWC15 homolog A"
                     /calculated_mol_wt=26774
     Region          1..229
                     /region_name="Cwf_Cwc_15"
                     /note="Cwf15/Cwc15 cell cycle control protein; pfam04889"
                     /db_xref="CDD:428176"
     CDS             1..230
                     /gene="LOC107893513"
                     /coded_by="XM_016818531.2:226..918"
                     /db_xref="GeneID:107893513"
ORIGIN      
        1 mttaarptwq pakggneqgg trifgpsqky ssrdlaahtt lkprkdgqdt qdelqkrnlr
       61 neleererrh fssrdksynd drdhrkgnhl llegakreae drivprsvda ddsdvevnsd
      121 nesddddddd deddeealla elerikkeka eeklrqekle qeeqlkakea ellrgnplln
      181 nptsfgvkrr wdddvvfknq argetkpqkr findtirndf hrkfllkymk
//
LOCUS       XP_016674022             230 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CWC15 homolog A [Gossypium hirsutum].
ACCESSION   XP_016674022
VERSION     XP_016674022.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818533.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674022.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..230
                     /product="protein CWC15 homolog A"
                     /calculated_mol_wt=26774
     Region          1..229
                     /region_name="Cwf_Cwc_15"
                     /note="Cwf15/Cwc15 cell cycle control protein; pfam04889"
                     /db_xref="CDD:428176"
     CDS             1..230
                     /gene="LOC107893513"
                     /coded_by="XM_016818533.2:185..877"
                     /db_xref="GeneID:107893513"
ORIGIN      
        1 mttaarptwq pakggneqgg trifgpsqky ssrdlaahtt lkprkdgqdt qdelqkrnlr
       61 neleererrh fssrdksynd drdhrkgnhl llegakreae drivprsvda ddsdvevnsd
      121 nesddddddd deddeealla elerikkeka eeklrqekle qeeqlkakea ellrgnplln
      181 nptsfgvkrr wdddvvfknq argetkpqkr findtirndf hrkfllkymk
//
LOCUS       XP_016674014             747 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674014
VERSION     XP_016674014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818525.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..747
                     /product="GBF-interacting protein 1-like isoform X1"
                     /calculated_mol_wt=78755
     Region          21..70
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..747
                     /gene="LOC107893511"
                     /coded_by="XM_016818525.2:103..2346"
                     /db_xref="GeneID:107893511"
ORIGIN      
        1 msskgdgggg gggaegsrvs ipdnakktil sireitgkqh sdeeiyailk ecsmdpneta
       61 qkllymdtfh dvkrkrdkkk etagtqgrgg rgsrgnyytl sgkdagggkn afarrengvn
      121 rtadrgsmps pasqkvknna alqmtktsta isngsstslp ngssshgcgt qssidgiise
      181 tknslpvnkp ktisaqtavg eppapilaqs fsslikgqek sasnlnttst satspivsrd
      241 svavdtiqse lglqqeaael nriqgnkhip wdmdisktek mvsevsismh geepskseva
      301 eqvkqsmpve qvvtsevaav tdkanpqlla dsnvrngqhv ifpthfqvse alkngltfgs
      361 fdasfgqvsk hnnvtdlein sarpvetslv vdetvgepss ssqgilpage ggnadqqqap
      421 celekvtesd gnvssdtnlk vdqsnhemhl hldnnqstip nvpsyglgfv pasmtnvpqf
      481 dgpearphdv shltnfisgn ppapsgsstp piqssvaaap qavhlfrqpf ppnyfpyphy
      541 lspfymhpmh qflnptglpq qpstgnvyma pgatppgvkf plpqfkpgtn agnpahlaip
      601 sgygpltspp igfnlplpsv tsgssssned iaalqfkenq iyttgplneg salwmpapgq
      661 dlsnlqvnsl ynlplhgpql pfspaqaghg afaglyqslp qtmaapsnvn tllqqsqsta
      721 aavgsvgpps gtyqqpqlaq vnwktny
//
LOCUS       XP_016674015             746 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674015
VERSION     XP_016674015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..746
                     /product="GBF-interacting protein 1-like isoform X2"
                     /calculated_mol_wt=78668
     Region          21..70
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..746
                     /gene="LOC107893511"
                     /coded_by="XM_016818526.2:105..2345"
                     /db_xref="GeneID:107893511"
ORIGIN      
        1 msskgdgggg gggaegsrvs ipdnakktil sireitgkqh sdeeiyailk ecsmdpneta
       61 qkllymdtfh dvkrkrdkkk etagtqgrgg rgsrgnyytl sgkdagggkn afarrengvn
      121 rtadrgsmps pasqkvknna alqmtktsta isngsstslp ngssshgcgt qssidgiise
      181 tknslpvnkp ktisaqtavg eppapilaqs fsslikgqek sasnlnttst satspivsrd
      241 svavdtiqse lglqqeaael nriqgnkhip wdmdisktek mvsevsismh geepskseva
      301 eqvkqsmpve qvvtsevaav tdkanpqlla dsnvrngqhv ifpthfqvse alkngltfgs
      361 fdasfgqvsk hnnvtdlein sarpvetslv vdetvgepss sqgilpageg gnadqqqapc
      421 elekvtesdg nvssdtnlkv dqsnhemhlh ldnnqstipn vpsyglgfvp asmtnvpqfd
      481 gpearphdvs hltnfisgnp papsgsstpp iqssvaaapq avhlfrqpfp pnyfpyphyl
      541 spfymhpmhq flnptglpqq pstgnvymap gatppgvkfp lpqfkpgtna gnpahlaips
      601 gygpltsppi gfnlplpsvt sgssssnedi aalqfkenqi yttgplnegs alwmpapgqd
      661 lsnlqvnsly nlplhgpqlp fspaqaghga faglyqslpq tmaapsnvnt llqqsqstaa
      721 avgsvgppsg tyqqpqlaqv nwktny
//
LOCUS       XP_016674016             746 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016674016
VERSION     XP_016674016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818527.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..746
                     /product="GBF-interacting protein 1-like isoform X3"
                     /calculated_mol_wt=78656
     Region          21..70
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..746
                     /gene="LOC107893511"
                     /coded_by="XM_016818527.2:105..2345"
                     /db_xref="GeneID:107893511"
ORIGIN      
        1 msskgdgggg gggaegsrvs ipdnakktil sireitgkqh sdeeiyailk ecsmdpneta
       61 qkllymdtfh dvkrkrdkkk etagtqgrgg rgsrgnyytl sgkdagggkn afarrengvn
      121 rtadrgsmps pasqkvknna alqmtktsta isngsstslp ngssshgcgt qssidgiise
      181 tknslpvnkp ktisaqtavg eppapilaqs fsslikgqek sasnlnttst satspivsrd
      241 svavdtiqse lglqqeaael nriqgnkhip wdmdisktek mvsevsismh geepskseva
      301 eqvkqsmpve qvtsevaavt dkanpqllad snvrngqhvi fpthfqvsea lkngltfgsf
      361 dasfgqvskh nnvtdleins arpvetslvv detvgepsss sqgilpageg gnadqqqapc
      421 elekvtesdg nvssdtnlkv dqsnhemhlh ldnnqstipn vpsyglgfvp asmtnvpqfd
      481 gpearphdvs hltnfisgnp papsgsstpp iqssvaaapq avhlfrqpfp pnyfpyphyl
      541 spfymhpmhq flnptglpqq pstgnvymap gatppgvkfp lpqfkpgtna gnpahlaips
      601 gygpltsppi gfnlplpsvt sgssssnedi aalqfkenqi yttgplnegs alwmpapgqd
      661 lsnlqvnsly nlplhgpqlp fspaqaghga faglyqslpq tmaapsnvnt llqqsqstaa
      721 avgsvgppsg tyqqpqlaqv nwktny
//
LOCUS       XP_040941183             745 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941183
VERSION     XP_040941183.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085249.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..745
                     /product="GBF-interacting protein 1-like isoform X4"
                     /calculated_mol_wt=78568
     Region          21..70
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..745
                     /gene="LOC107893511"
                     /coded_by="XM_041085249.1:107..2344"
                     /db_xref="GeneID:107893511"
ORIGIN      
        1 msskgdgggg gggaegsrvs ipdnakktil sireitgkqh sdeeiyailk ecsmdpneta
       61 qkllymdtfh dvkrkrdkkk etagtqgrgg rgsrgnyytl sgkdagggkn afarrengvn
      121 rtadrgsmps pasqkvknna alqmtktsta isngsstslp ngssshgcgt qssidgiise
      181 tknslpvnkp ktisaqtavg eppapilaqs fsslikgqek sasnlnttst satspivsrd
      241 svavdtiqse lglqqeaael nriqgnkhip wdmdisktek mvsevsismh geepskseva
      301 eqvkqsmpve qvtsevaavt dkanpqllad snvrngqhvi fpthfqvsea lkngltfgsf
      361 dasfgqvskh nnvtdleins arpvetslvv detvgepsss qgilpagegg nadqqqapce
      421 lekvtesdgn vssdtnlkvd qsnhemhlhl dnnqstipnv psyglgfvpa smtnvpqfdg
      481 pearphdvsh ltnfisgnpp apsgsstppi qssvaaapqa vhlfrqpfpp nyfpyphyls
      541 pfymhpmhqf lnptglpqqp stgnvymapg atppgvkfpl pqfkpgtnag npahlaipsg
      601 ygpltsppig fnlplpsvts gssssnedia alqfkenqiy ttgplnegsa lwmpapgqdl
      661 snlqvnslyn lplhgpqlpf spaqaghgaf aglyqslpqt maapsnvntl lqqsqstaaa
      721 vgsvgppsgt yqqpqlaqvn wktny
//
LOCUS       XP_016674017             521 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 22 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674017
VERSION     XP_016674017.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818528.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674017.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..521
                     /product="coiled-coil domain-containing protein 22 isoform
                     X1"
                     /calculated_mol_wt=59744
     Region          1..493
                     /region_name="CCDC22"
                     /note="Coiled-coil domain-containing protein 22;
                     pfam05667"
                     /db_xref="CDD:461708"
     CDS             1..521
                     /gene="LOC107893512"
                     /coded_by="XM_016818528.2:127..1692"
                     /db_xref="GeneID:107893512"
ORIGIN      
        1 meesqeillk slssfgisip envssfselt pttlislccq slnilgnndd ddenhfsfpi
       61 svedsvsvad kfkicsdvsl afknlgylgd mnyykflyps eeelhklvrf lveklsssse
      121 avkfsgerdv gprlkfkedn fgkvsesvmk nadneevdqn lqkveailkd lrvdelsess
      181 qfkagdatvv cdplrvhdil qdelfsesta efvdssgasg hegtahqkde hvstcpketn
      241 skiqyeegdl lcqekalkde lrantlqmqh leeefeswka aadmafdenh pmeffleqln
      301 kridakkhni lelelqwdav qkpieekkrs leehlyannp vaqeklqklr eielemqlts
      361 seirkreeeh lklaadlkkq pevasrrsyi eqikeitkns skldsdieri lrdtrtlqle
      421 snsiqeslhr tyavideivf reakkntdrg qayrlltsih dsfeqiseki lttdrirrei
      481 adlekklaav ssrslnedkl qvdvdaimke neyleqqiqy d
//
LOCUS       XP_016674018             486 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 22 homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016674018
VERSION     XP_016674018.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818529.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674018.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="coiled-coil domain-containing protein 22 homolog
                     isoform X2"
                     /calculated_mol_wt=55510
     Region          1..441
                     /region_name="CCDC22"
                     /note="Coiled-coil domain-containing protein 22;
                     pfam05667"
                     /db_xref="CDD:461708"
     CDS             1..486
                     /gene="LOC107893512"
                     /coded_by="XM_016818529.2:63..1523"
                     /db_xref="GeneID:107893512"
ORIGIN      
        1 meesqeillk slssfgisip envssfselt pttlislccq slnilgnndd ddenhfsfpi
       61 svedsvsvad kfkicsdvsl afknlgylgd mnyykflyps eeelhklvrf lveklsssse
      121 avkfsgerdv gprlkfkedn fgkvsesvmk nadneevdqn lqkveailkd lrvdelsess
      181 qfkagdatvv cdplrvhdil qdelfsesta efvdssgasg hegtahqkde hvstcpketn
      241 skiqyeegdl lcqekalkde lrantlqmqh leeefeswka aadmafdenh pmeffleqln
      301 kridakkhni lelelqwdav qkpieekkrs leehlyannp vaqeklqklr eielemqlts
      361 seirkreeeh lklaadlkkq pevasrrsyi eqikeitkns skldsdieri lrdtrtlqle
      421 snsiqeslhr tyavideivf rkncvyagkq rktqtgdkli dcsqasmial skslrkfsrp
      481 tefeek
//
LOCUS       XP_040941185             637 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: 26S rRNA (cytosine-C(5))-methyltransferase
            NOP2B-like [Gossypium hirsutum].
ACCESSION   XP_040941185
VERSION     XP_040941185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085251.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..637
                     /product="LOW QUALITY PROTEIN: 26S rRNA
                     (cytosine-C(5))-methyltransferase NOP2B-like"
                     /calculated_mol_wt=71566
     Region          252..517
                     /region_name="nop2p"
                     /note="NOL1/NOP2/sun family putative RNA methylase;
                     TIGR00446"
                     /db_xref="CDD:188051"
     CDS             1..637
                     /gene="LOC107893508"
                     /coded_by="XM_041085251.1:162..2075"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107893508"
ORIGIN      
        1 masnkskgak sknqppkkkq rndlfidkkr ptkkdevldd vsdghseeee eagdlldgde
       61 qmsdfddddv seisdeddap laddflqgsd dnedsgsgst sgsgsdsdsd etdieeksra
      121 ideqrareek daqaemelni keesdefrlp tkeeleaeqq rppdlanlqm rikeivrvls
      181 nfkdmrqegt trkdyidqlk idlgsyygyn eflirvlvdm fpvvelmeli eafekprptc
      241 irtntlrtrr rdladvlskr gveldqlskw skvglvvyns hvpigatpey lagfyyiqsa
      301 ssflpvmala pqekervvdm aaapggktty vaalmknsgi iyaneisear lksltanlhr
      361 mgvtntivcn ydgrelpkvl gqnsvgrvll dspcsgtgvi tkdpsvktsk slddiqkcah
      421 lqkqlilaai dmvdansksg gyivystcsi mvpeneavid yalkkrdvkv vpcgldfgcp
      481 gyirfrehqf htslenxrrf yphvhnmdgf fvaklkkmsn akknpinsed letivqtqrp
      541 entpidkdnt eelkqnlkkq gnkrkkeslk knvlskngkv espptsktkk rtetgkvesp
      601 lsskkrkrrf pskeeisear egkrkamrek rkqgrke
//
LOCUS       XP_016697387             587 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PK [Gossypium hirsutum].
ACCESSION   XP_016697387
VERSION     XP_016697387.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016697387.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..587
                     /product="serine/threonine-protein kinase D6PK"
                     /calculated_mol_wt=64349
     Region          196..553
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(203..207,211,224,226,258,274..275,277,281,283,322,
                     324,326..327,329,339..340,343,434..439,466,472,475)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(203..207,211,224,226,258,275..277,281,322,324,
                     326..327,329,339..340)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(207,281,283,322,324,326,343,434..439,466,472,475)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(339..349,431..439)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          371..>392
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..587
                     /gene="LOC107913342"
                     /coded_by="XM_016841898.2:799..2562"
                     /db_xref="GeneID:107913342"
ORIGIN      
        1 matkgdsirp spiqisktsk lvpvtpktvp kgtqqvvseq dcvgmideik gsktyklgav
       61 dsltkkvdlg lslshpkevp ghvgsevcqd gglpegsgee ekkasehgis sasakssdga
      121 tglvktsgsa kagdrpdhte sgkssmcrgs tssdvsness ysslssrinr pnktndirwe
      181 aiqavqgkdd ilglnhfrll krlgcgdigs vylselsgtr cyfamkvmdk aslasrkkll
      241 raqtereilq sldhpflptl ythfetdkfs clvmefcpgg dlhtlrqrqp gkhfteqavk
      301 fyvaevllal eylhmlgivy rdlkpenvlv redghimlsd fdlslrcavs pilvkssshe
      361 seplrknpvy cvqpacieps ciqpscvapt tcfsprffss kskkdrkpkn emgkqvsplp
      421 eliaeptnar smsfvgthey lapeiikgeg hgsavdwwtf giflyellfg ktpfkgsgnr
      481 atlfnvvgqp lrfpespvvs fsardlirgl lvkepqqrla ykrgateikq hpffegvnwa
      541 lircasppev pkpveverip aptssagnrp tvpatkdqnn ylefdff
//
LOCUS       XP_016697388             587 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PK [Gossypium hirsutum].
ACCESSION   XP_016697388
VERSION     XP_016697388.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016697388.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..587
                     /product="serine/threonine-protein kinase D6PK"
                     /calculated_mol_wt=64349
     Region          196..553
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(203..207,211,224,226,258,274..275,277,281,283,322,
                     324,326..327,329,339..340,343,434..439,466,472,475)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(203..207,211,224,226,258,275..277,281,322,324,
                     326..327,329,339..340)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(207,281,283,322,324,326,343,434..439,466,472,475)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(339..349,431..439)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          371..>392
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..587
                     /gene="LOC107913342"
                     /coded_by="XM_016841899.2:453..2216"
                     /db_xref="GeneID:107913342"
ORIGIN      
        1 matkgdsirp spiqisktsk lvpvtpktvp kgtqqvvseq dcvgmideik gsktyklgav
       61 dsltkkvdlg lslshpkevp ghvgsevcqd gglpegsgee ekkasehgis sasakssdga
      121 tglvktsgsa kagdrpdhte sgkssmcrgs tssdvsness ysslssrinr pnktndirwe
      181 aiqavqgkdd ilglnhfrll krlgcgdigs vylselsgtr cyfamkvmdk aslasrkkll
      241 raqtereilq sldhpflptl ythfetdkfs clvmefcpgg dlhtlrqrqp gkhfteqavk
      301 fyvaevllal eylhmlgivy rdlkpenvlv redghimlsd fdlslrcavs pilvkssshe
      361 seplrknpvy cvqpacieps ciqpscvapt tcfsprffss kskkdrkpkn emgkqvsplp
      421 eliaeptnar smsfvgthey lapeiikgeg hgsavdwwtf giflyellfg ktpfkgsgnr
      481 atlfnvvgqp lrfpespvvs fsardlirgl lvkepqqrla ykrgateikq hpffegvnwa
      541 lircasppev pkpveverip aptssagnrp tvpatkdqnn ylefdff
//
LOCUS       XP_040941186             619 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At5g55860 [Gossypium hirsutum].
ACCESSION   XP_040941186
VERSION     XP_040941186.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085252.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..619
                     /product="WEB family protein At5g55860"
                     /calculated_mol_wt=68628
     Region          18..565
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..619
                     /gene="LOC107911128"
                     /coded_by="XM_041085252.1:835..2694"
                     /db_xref="GeneID:107911128"
ORIGIN      
        1 mvamgrssat vspkvqvgev dtsapfttvk davtrfseat fsgekptmka akarpaeral
       61 aketqlhlaq nvlnkfkgrl enaettksqa ledleraktt veelthklkt anesknsvik
      121 ateaakdqak qfeetnssdl pgtngarsqd lgtaneqytt vitelyaakq elskarkqrd
      181 asleakiaaf nqageaehav kvniekvgal sreisavqes ignvklasle iqkeqaktya
      241 ekdtqrqlyk akieestkrl lalknesdie larnleaklc ktvnqiadlq kqikyakasd
      301 lesvqavtse ldgvkgsqqk vinkenllrn lveslkvele nvkkehselk ekeaetesia
      361 gnlhvklrrs kydfevflae esktrgayee mistlqqlpv etegaqreae emkketeklk
      421 leaeasrvrl keadkklrnv seendaakea atraldqikm lserinaara stpecgadit
      481 isgeefesls hkaeesnnia emkveaamar veavkasene alkrieaiqk eiedmkaatm
      541 dalkraevae aakmaverel qrwrereqkk aakaaaqilp esssrhgrkq kqnasdrivq
      601 vqklekskss rksqsqsvy
//
LOCUS       XP_040941187             337 aa            linear   PLN 06-AUG-2024
DEFINITION  SEC14 cytosolic factor isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941187
VERSION     XP_040941187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085253.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..337
                     /product="SEC14 cytosolic factor isoform X1"
                     /calculated_mol_wt=38204
     Region          8..59
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; pfam03765"
                     /db_xref="CDD:461043"
     Region          79..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..337
                     /gene="LOC107913340"
                     /coded_by="XM_041085253.1:350..1363"
                     /db_xref="GeneID:107913340"
ORIGIN      
        1 msnthqeaik qflslmgnvd eqlndtfqnm hhgnptetla rflkardwdv qkaykmlidc
       61 lqwriqneid nilskpiipa dlyravrdsq lvglsgyske glpviaigvg lstydkasvn
      121 yyvqshiqmn eyrdrvilpa atqkygkhis tclkvldmtg lklsalnqik llttistidd
      181 lnypektety yivnapyifs acwkavkpll qertkrkiqv lqgcgrdell kvmdysslph
      241 fcrkegsgss rnrsngtidn cfsldhsyhq qlynyirhqa nliesgrpik qgsvhvefpe
      301 pdpedtkiak tiesefqrla dqngicnsln glkvngd
//
LOCUS       XP_040941189             308 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH11
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941189
VERSION     XP_040941189.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085255.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..308
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH11 isoform X2"
                     /calculated_mol_wt=34868
     Region          <2..30
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; pfam03765"
                     /db_xref="CDD:461043"
     Region          50..213
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..308
                     /gene="LOC107913340"
                     /coded_by="XM_041085255.1:521..1447"
                     /db_xref="GeneID:107913340"
ORIGIN      
        1 mhhgnptetl arflkardwd vqkaykmlid clqwriqnei dnilskpiip adlyravrds
       61 qlvglsgysk eglpviaigv glstydkasv nyyvqshiqm neyrdrvilp aatqkygkhi
      121 stclkvldmt glklsalnqi kllttistid dlnypektet yyivnapyif sacwkavkpl
      181 lqertkrkiq vlqgcgrdel lkvmdysslp hfcrkegsgs srnrsngtid ncfsldhsyh
      241 qqlynyirhq anliesgrpi kqgsvhvefp epdpedtkia ktiesefqrl adqngicnsl
      301 nglkvngd
//
LOCUS       XP_016697381             344 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016697381
VERSION     XP_016697381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841892.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="transcription termination factor MTEF1,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=39387
     Region          <119..317
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..344
                     /gene="LOC107913339"
                     /coded_by="XM_016841892.2:482..1516"
                     /db_xref="GeneID:107913339"
ORIGIN      
        1 mslislsham qdtlpflpkn npfppllpph hhdfpllsrp knlhfptfss rtitptslpp
       61 kphpkipqip stsppppmpp pnshsdfqek mlylesigld ffsliqhhpp iifaslhdlk
      121 stvdflasms fttlelrril smcphiltvk stsllpiftf llreahvngs dlkkvinrrp
      181 rllacnvetq lrptlyflqs igisevkkht slltcsvenk lipridyfqk igfshrqtis
      241 mfcrfpplfn ysikenyelk lnyfmvemgr dlreirefpq yfsfslenri kprhqicvek
      301 gvcfplpall ktsevefcsr levccnstlp lkgsplwcak acdi
//
LOCUS       XP_016697382             344 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016697382
VERSION     XP_016697382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841893.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="transcription termination factor MTEF1,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=39387
     Region          <119..317
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..344
                     /gene="LOC107913339"
                     /coded_by="XM_016841893.2:487..1521"
                     /db_xref="GeneID:107913339"
ORIGIN      
        1 mslislsham qdtlpflpkn npfppllpph hhdfpllsrp knlhfptfss rtitptslpp
       61 kphpkipqip stsppppmpp pnshsdfqek mlylesigld ffsliqhhpp iifaslhdlk
      121 stvdflasms fttlelrril smcphiltvk stsllpiftf llreahvngs dlkkvinrrp
      181 rllacnvetq lrptlyflqs igisevkkht slltcsvenk lipridyfqk igfshrqtis
      241 mfcrfpplfn ysikenyelk lnyfmvemgr dlreirefpq yfsfslenri kprhqicvek
      301 gvcfplpall ktsevefcsr levccnstlp lkgsplwcak acdi
//
LOCUS       XP_016697383             344 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016697383
VERSION     XP_016697383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841894.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="transcription termination factor MTEF1,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=39387
     Region          <119..317
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..344
                     /gene="LOC107913339"
                     /coded_by="XM_016841894.2:403..1437"
                     /db_xref="GeneID:107913339"
ORIGIN      
        1 mslislsham qdtlpflpkn npfppllpph hhdfpllsrp knlhfptfss rtitptslpp
       61 kphpkipqip stsppppmpp pnshsdfqek mlylesigld ffsliqhhpp iifaslhdlk
      121 stvdflasms fttlelrril smcphiltvk stsllpiftf llreahvngs dlkkvinrrp
      181 rllacnvetq lrptlyflqs igisevkkht slltcsvenk lipridyfqk igfshrqtis
      241 mfcrfpplfn ysikenyelk lnyfmvemgr dlreirefpq yfsfslenri kprhqicvek
      301 gvcfplpall ktsevefcsr levccnstlp lkgsplwcak acdi
//
LOCUS       XP_040941190             211 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF1, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941190
VERSION     XP_040941190.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085256.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..211
                     /product="transcription termination factor MTEF1,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=23852
     Region          93..>204
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..211
                     /gene="LOC107913339"
                     /coded_by="XM_041085256.1:403..1038"
                     /db_xref="GeneID:107913339"
ORIGIN      
        1 mslislsham qdtlpflpkn npfppllpph hhdfpllsrp knlhfptfss rtitptslpp
       61 kphpkipqip stsppppmpp pnshsdfqek mlylesigld ffsliqhhpp iifaslhdlk
      121 stvdflasms fttlelrril smcphiltvk stsllpiftf llreahvngs dlkkvinrrp
      181 rllacnvetq lrptlyflqs igiselqwma r
//
LOCUS       XP_040941191             207 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF1, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941191
VERSION     XP_040941191.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085257.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..207
                     /product="transcription termination factor MTEF1,
                     chloroplastic isoform X3"
                     /calculated_mol_wt=23295
     Region          93..>206
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..207
                     /gene="LOC107913339"
                     /coded_by="XM_041085257.1:402..1025"
                     /db_xref="GeneID:107913339"
ORIGIN      
        1 mslislsham qdtlpflpkn npfppllpph hhdfpllsrp knlhfptfss rtitptslpp
       61 kphpkipqip stsppppmpp pnshsdfqek mlylesigld ffsliqhhpp iifaslhdlk
      121 stvdflasms fttlelrril smcphiltvk stsllpiftf llreahvngs dlkkvinrrp
      181 rllacnvetq lrptlyflqs igisekt
//
LOCUS       XP_040941192             206 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF1, chloroplastic isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040941192
VERSION     XP_040941192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085258.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..206
                     /product="transcription termination factor MTEF1,
                     chloroplastic isoform X4"
                     /calculated_mol_wt=23165
     Region          93..>204
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..206
                     /gene="LOC107913339"
                     /coded_by="XM_041085258.1:402..1022"
                     /db_xref="GeneID:107913339"
ORIGIN      
        1 mslislsham qdtlpflpkn npfppllpph hhdfpllsrp knlhfptfss rtitptslpp
       61 kphpkipqip stsppppmpp pnshsdfqek mlylesigld ffsliqhhpp iifaslhdlk
      121 stvdflasms fttlelrril smcphiltvk stsllpiftf llreahvngs dlkkvinrrp
      181 rllacnvetq lrptlyflqs igisev
//
LOCUS       XP_016697380              77 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NOI4 [Gossypium hirsutum].
ACCESSION   XP_016697380
VERSION     XP_016697380.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841891.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016697380.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..77
                     /product="protein NOI4"
                     /calculated_mol_wt=8172
     Region          3..38
                     /region_name="AvrRpt-cleavage"
                     /note="Cleavage site for pathogenic type III effector
                     avirulence factor Avr; pfam05627"
                     /db_xref="CDD:398967"
     CDS             1..77
                     /gene="LOC107913337"
                     /coded_by="XM_016841891.2:152..385"
                     /db_xref="GeneID:107913337"
ORIGIN      
        1 msekgrplpk fgewdvndpa saegftvifn kardekktgg kpespsggdp hlkpgadpsk
       61 tqpkkwlccm happaes
//
LOCUS       XP_016697379             290 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016697379
VERSION     XP_016697379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841890.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..290
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31718
     CDS             1..290
                     /gene="LOC107913335"
                     /coded_by="XM_016841890.2:175..1047"
                     /db_xref="GeneID:107913335"
ORIGIN      
        1 masddevavf thtnlgthla iavspnttvg dfhrelerth hacfpelgki evhalmvrrk
       61 scfyhlpssm pikyafqhqv gtwflniear tlkdsgspcl snfaaievgd hkcdgnrltg
      121 slvrdtregt ticrdaaewn sgsssraita dgvingclln csgvsqhpss pgsgramqgl
      181 peeqlrtkad ngycssalap ftvrtppkqs lfltpvdrtt rirrdrfgss gvgkriilas
      241 nnirisdkrr pitplsnird gkllccknlc rakflvfems dsdeedvdal
//
LOCUS       XP_016694722             194 aa            linear   PLN 06-AUG-2024
DEFINITION  mavicyanin [Gossypium hirsutum].
ACCESSION   XP_016694722
VERSION     XP_016694722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..194
                     /product="mavicyanin"
                     /calculated_mol_wt=21448
     Region          30..131
                     /region_name="OsENODL1_like"
                     /note="Early nodulin-like protein (OsENODL1) and similar
                     proteins; cd11019"
                     /db_xref="CDD:259905"
     CDS             1..194
                     /gene="LOC107911400"
                     /coded_by="XM_016839233.2:47..631"
                     /db_xref="GeneID:107911400"
ORIGIN      
        1 mssfslqklf kfalfsvvfi smatlaiasf qfrvggeggw tkptgneset ynewasrnrf
       61 hvgdslyfky sndsvlvvnh tsytncsvsn pilkfkdgdt vfefdrygff yfisgerghc
      121 kagqkliirv mvhpamsspp paqspmedgg snddgdgwds iwgppphnst ikqavasyfm
      181 talggmlvim yllm
//
LOCUS       XP_016697378             667 aa            linear   PLN 06-AUG-2024
DEFINITION  probable L-type lectin-domain containing receptor kinase S.7
            [Gossypium hirsutum].
ACCESSION   XP_016697378
VERSION     XP_016697378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841889.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..667
                     /product="probable L-type lectin-domain containing
                     receptor kinase S.7"
                     /calculated_mol_wt=73771
     Region          31..260
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            order(31..32,34,42,74,77,174,194,205,207..209,217..219,
                     221,233)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173887"
     Site            order(31..32,34,42,74,77,233)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173887"
     Site            133
                     /site_type="other"
                     /note="N-linked glycosylation site"
                     /db_xref="CDD:173887"
     Site            order(146,148,162)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     Region          362..630
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(362..366,370,383,385,413,429..432,436,438,482,484,
                     486..487,489,500,503,520..523)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(362..366,370,383,385,413,429..432,436,482,484,
                     486..487,489,500)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(366,436,438,482,484,486,503,520..523)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(499..506,517..519,520..523)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..667
                     /gene="LOC107913334"
                     /coded_by="XM_016841889.2:216..2219"
                     /db_xref="GeneID:107913334"
ORIGIN      
        1 mpprnllvfl lflfpllftf dspfiilaes tsfnfpfftv rnltllgdsh lkngvigltr
       61 etavpssssg tliynhpihf ldqdsnitas fsttfsftin svdpttfgdg ltfflspdnq
      121 tlgssgaylg lanslvlakn kflaiefdtk ldtrfndsnd nhvgldvnsl nsikatdall
      181 qdidlksgnl itawivyknd lrvlnvflsy stvkpqtplf svdidlsgyl keyvfvgfsa
      241 stegstgihs ienwsfktfg flpvrprshp hnvsgssvtv psvvpasnst nrhhkrlglg
      301 lgiagpafff vvlavfgyvs vkkwkdmrie knlkaeilag prefsykely aatrgfhssr
      361 iigrgafgnv ykaifvssgc vsavkrskhs reckteflae lsimaglrhk nlvqlqgwca
      421 ekgelllvye fmpngsldtl lhqhpengll ltwshrqnia vglasvlayl hqeceqqvih
      481 rdiktsniml dgnfnprlgd fglarlmdhd kspvstltag tmgylapeyl qygkatektd
      541 vfsygvvile vacgrrpier evnsqkmvnl idwvwgllge griidaadkr lkgdfneeem
      601 rklllvglsc ahpdsaerps irrilqilnn eadpiavpkm kpsltfscsl tvedivsdde
      661 eskttqs
//
LOCUS       XP_016705377             231 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-9 [Gossypium hirsutum].
ACCESSION   XP_016705377
VERSION     XP_016705377.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849888.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016705377.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..231
                     /product="nuclear transcription factor Y subunit B-9"
                     /calculated_mol_wt=25448
     Region          60..150
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(60,62..63,66,92,95..96,100,103..104,107..108,111,
                     131..133,135)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(63..68,71,75..76,79..81,84..87,90,93..94,97..102,
                     104..107,110,119..123,126,130,134..135,138,142,145,
                     149..150)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(63,68..71,74,77,85..88,91,119..120)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..231
                     /gene="LOC107920272"
                     /coded_by="XM_016849888.2:83..778"
                     /db_xref="GeneID:107920272"
ORIGIN      
        1 mergdgfnrf ykhaksssgl simhgdssns ntntntiinn naanngnaan sntmpppcmv
       61 reqdqympia nvirimrril pthakisdda ketiqecvse yisfitgean ercqreqrkt
      121 itaedvlwam gklgfddyve pltvflnryr enenertslr sepmlkrgid ygpsmmmapy
      181 gagfhvghqq gifdgatamg gymrdgssgg ggepssqasl anhfdpfgqf k
//
LOCUS       XP_040941195             465 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD-dependent protein deacetylase SRT1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941195
VERSION     XP_040941195.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085261.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..465
                     /product="NAD-dependent protein deacetylase SRT1 isoform
                     X1"
                     /calculated_mol_wt=51805
     Region          46..251
                     /region_name="SIRT7"
                     /note="Eukaryotic and prokaryotic group (class4) which
                     includes human sirtuin SIRT6, SIRT7, and several bacterial
                     homologs; and are members of the SIR2 family of proteins,
                     silent information regulator 2 (Sir2) enzymes which
                     catalyze NAD+-dependent protein...; cd01410"
                     /db_xref="CDD:238701"
     Site            order(54,56..57,64..65,96,114..115,117,134,209,214,
                     236..237)
                     /site_type="other"
                     /note="NAD+ binding site [chemical binding]"
                     /db_xref="CDD:238701"
     Site            order(116,134,181,183..187,213..215)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238701"
     Site            order(142,145,167,172)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:238701"
     Region          <405..441
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     CDS             1..465
                     /gene="LOC121212471"
                     /coded_by="XM_041085261.1:242..1639"
                     /db_xref="GeneID:121212471"
ORIGIN      
        1 mslgyaekls fiedvgqvgm teffdsahvl qdkieqlakl ieksrhlvvf tgagistscg
       61 ipdfrgpkgi wtlqregqpl peaslpfhra mpsmthmalv glekagilkf visqnvdglh
      121 lrsgiprekl aelhgnsfme tcpscgaeyy rdfeletigl ketsrrcsde kcgaklrdtv
      181 ldwedalppk emnlaekhcr mgdlvlclgt slqitpacnl plkslrgggk ivivnlqktp
      241 kdkkaslvih gfvdtviagv mellnmkipp yiridlfqti lsqslssdkk fvnwtirias
      301 vhglsaplpf iksievsfsn nqnykeatld tqpfllkrrt vltetfeifl nlkfsdgcgc
      361 lntrieipfn fqdsiegfkl dknatlekmr daaiedskcg qnavverktv lvpksemtvh
      421 aivtnvktfd yqlsngdmkp ikeglnglkt trkqrskgrk rktrl
//
LOCUS       XP_040941196             375 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD-dependent protein deacetylase SRT1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941196
VERSION     XP_040941196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085262.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..375
                     /product="NAD-dependent protein deacetylase SRT1 isoform
                     X2"
                     /calculated_mol_wt=41893
     Region          <1..161
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
     Region          <315..351
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     CDS             1..375
                     /gene="LOC121212471"
                     /coded_by="XM_041085262.1:280..1407"
                     /db_xref="GeneID:121212471"
ORIGIN      
        1 mpsmthmalv glekagilkf visqnvdglh lrsgiprekl aelhgnsfme tcpscgaeyy
       61 rdfeletigl ketsrrcsde kcgaklrdtv ldwedalppk emnlaekhcr mgdlvlclgt
      121 slqitpacnl plkslrgggk ivivnlqktp kdkkaslvih gfvdtviagv mellnmkipp
      181 yiridlfqti lsqslssdkk fvnwtirias vhglsaplpf iksievsfsn nqnykeatld
      241 tqpfllkrrt vltetfeifl nlkfsdgcgc lntrieipfn fqdsiegfkl dknatlekmr
      301 daaiedskcg qnavverktv lvpksemtvh aivtnvktfd yqlsngdmkp ikeglnglkt
      361 trkqrskgrk rktrl
//
LOCUS       XP_040941197             258 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate mutase-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941197
VERSION     XP_040941197.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085263.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..258
                     /product="phosphoglycerate mutase-like protein 1"
                     /calculated_mol_wt=29374
     Region          19..191
                     /region_name="PGAM"
                     /note="Phosphoglycerate mutase family; smart00855"
                     /db_xref="CDD:214859"
     Site            order(23..24,84,187..188)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132718"
     CDS             1..258
                     /gene="LOC107919612"
                     /coded_by="XM_041085263.1:89..865"
                     /db_xref="GeneID:107919612"
ORIGIN      
        1 mesiegqfpy pwhqhckilh lvrhgqalhn vegdknpeal lspnlfdaql tplglkqvak
       61 lrnevhasgl fnrielvvts plsrametas gcfgregena vssstpkima velcrdrlgv
      121 rpsdmrrkms dccsrfpwid fsmvdveddn lwntelrese eelaervtkl lnwvwkrpek
      181 eivivshglv lqhilinlla nsdfnptltp alckrfdnce lrsvvildts kigrerwawl
      241 csddkakdvl kqvwssfn
//
LOCUS       XP_040941198             295 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 10 [Gossypium hirsutum].
ACCESSION   XP_040941198
VERSION     XP_040941198.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085264.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..295
                     /product="nudix hydrolase 10"
                     /calculated_mol_wt=33600
     Region          30..104
                     /region_name="Nudix_hydro"
                     /note="Nudix hydrolase domain; pfam18290"
                     /db_xref="CDD:465697"
     Region          117..238
                     /region_name="NUDIX_ASFGF2_Nudt6"
                     /note="Antisense Basic Fibroblast Growth Factor; cd04670"
                     /db_xref="CDD:467554"
     CDS             1..295
                     /gene="LOC107918550"
                     /coded_by="XM_041085264.1:223..1110"
                     /db_xref="GeneID:107918550"
ORIGIN      
        1 mpisadllev vgrpvcrngv whdellpvin ddhggviiem kehmdtetfl tmlrasmlqw
       61 kqqgkkgvwi klpiglihlv etavkegfry hhaepsylml vfwipktpst ipgnathrvg
      121 vgaiilndkr evlvvqeksg llqgtgiwki ptgvveegee ifvaamrevk eetgidtefv
      181 evlgfrqthk sffeksdlff icmlhplsfd iqkqeleiea aqwmpfeeya aqpfaqkhel
      241 fryvnelcla kvdrsytgfs prptvsifsd hssflylnnq dldksrsvtn peeqn
//
LOCUS       XP_040941199             517 aa            linear   PLN 06-AUG-2024
DEFINITION  fasciclin-like arabinogalactan protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941199
VERSION     XP_040941199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085265.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..517
                     /product="fasciclin-like arabinogalactan protein 1"
                     /calculated_mol_wt=55612
     Region          138..>213
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; cl02663"
                     /db_xref="CDD:470649"
     Region          327..431
                     /region_name="FAS1"
                     /note="Four repeated domains in the Fasciclin I family of
                     proteins, present in many other contexts; smart00554"
                     /db_xref="CDD:214719"
     CDS             1..517
                     /gene="LOC121202809"
                     /coded_by="XM_041085265.1:8..1561"
                     /db_xref="GeneID:121202809"
ORIGIN      
        1 mktlnpqsnt fslvelnltt rrrqslhqnl applslfprs qnhkqsglls kliifqalss
       61 ppppfkvltf lplqkllfss skskkepipp pidvsqantq hsstmpqkhp llllifsvfl
      121 ifqtsdghni trllakhpsl ssfnhyltlt hlaqeinrrt titvlaldna amssllnknp
      181 siytmknils lhvlldyfga kklhqitngt alaatmfqat gvapgvsgfv nitdfkggkv
      241 gfgaeanggd ldsffvksve elpynisviq iskalpsaia eaptpgpsel nitgimsahg
      301 ckvfadtlla npeamgtyed nlnggltvfc plddafkafl pkyknltasg kesfleffgv
      361 pvyqslsmlk snnglmntla tdgaskfdft vqndgeqvtl ktkintvkit gtlldeqpva
      421 iytidkvlmp relfkaaptp apapapeeaa dapkasksks ksksksksap tpesdapads
      481 pdddpadqta ddnaalsfkg grfvavglnf llvflll
//
LOCUS       XP_016703360             170 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIC 20-v, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016703360
VERSION     XP_016703360.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847871.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703360.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="protein TIC 20-v, chloroplastic isoform X1"
                     /calculated_mol_wt=19306
     Region          45..>160
                     /region_name="TIC20"
                     /note="Chloroplast import apparatus Tic20-like; cl15935"
                     /db_xref="CDD:387700"
     CDS             1..170
                     /gene="LOC107918336"
                     /coded_by="XM_016847871.2:139..651"
                     /db_xref="GeneID:107918336"
ORIGIN      
        1 mllfnpvtsl svpltlspkt hyspslsslk nhpsfltnkn hnptrrklli vqakgedsad
       61 gpdrlisaic yfypffdgiq ygkyvitqft piqvliqplf paikvfksfp lngflvfltl
      121 yfvvvrnpnf gryvrfntmq aivldvllif pdllersfnp kevakvaycr
//
LOCUS       XP_016703361             149 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIC 20-v, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016703361
VERSION     XP_016703361.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847872.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703361.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..149
                     /product="protein TIC 20-v, chloroplastic isoform X2"
                     /calculated_mol_wt=16472
     Region          <64..144
                     /region_name="TIC20"
                     /note="Chloroplast import apparatus Tic20-like; cl15935"
                     /db_xref="CDD:387700"
     CDS             1..149
                     /gene="LOC107918336"
                     /coded_by="XM_016847872.2:139..588"
                     /db_xref="GeneID:107918336"
ORIGIN      
        1 mllfnpvtsl svpltlspkt hyspslsslk nhpsfltnkn hnptrrklli vqakgedsad
       61 gpdrnpnfgr yvrfntmqai vldvllifpd llersfnpke glgldlvmsf dstvflyllv
      121 sliyassscl fgqlprlpiv aeaadrqvl
//
LOCUS       XP_016703362             108 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703362
VERSION     XP_016703362.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847873.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703362.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=12078
     Region          <64..>98
                     /region_name="TIC20"
                     /note="Chloroplast import apparatus Tic20-like; cl15935"
                     /db_xref="CDD:387700"
     CDS             1..108
                     /gene="LOC107918336"
                     /coded_by="XM_016847873.2:140..466"
                     /db_xref="GeneID:107918336"
ORIGIN      
        1 mllfnpvtsl svpltlspkt hyspslsslk nhpsfltnkn hnptrrklli vqakgedsad
       61 gpdrnpnfgr yvrfntmqai vldvllifpd llersfnpke vakvaycr
//
LOCUS       XP_016675931             172 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-2 [Gossypium hirsutum].
ACCESSION   XP_016675931
VERSION     XP_016675931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820442.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..172
                     /product="nuclear transcription factor Y subunit B-2"
                     /calculated_mol_wt=18485
     Region          24..113
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(25..26,29,55,58..59,63,66..67,70..71,74,94..96,98)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(26..31,34,38..39,42..44,47..50,53,56..57,60..65,
                     67..70,73,82..86,89,93,97..98,101,105,108,112..113)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(26,31..34,37,40,48..51,54,82..83)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..172
                     /gene="LOC107895183"
                     /coded_by="XM_016820442.2:427..945"
                     /db_xref="GeneID:107895183"
ORIGIN      
        1 mvdsdtesgg gqnnasnadl sspkeqdrfl pianvsrimk kalpanakis keaketvqec
       61 vsefisfitg easdkcqkek rktingddll wamttlgfed yveplkvylq rfremegekt
      121 avardkdapl aggvgaaaaa gssgmygmmv hqqhqghvyg tggfhqmgrg pr
//
LOCUS       XP_016675930             512 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 71D10 [Gossypium hirsutum].
ACCESSION   XP_016675930
VERSION     XP_016675930.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820441.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..512
                     /product="cytochrome P450 71D10"
                     /calculated_mol_wt=57908
     Region          69..489
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(106,131,135,143,188,300,303..304,307..308,367,
                     371..372,374,434..437,440..444,447..448)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(210,214,239,299,302..303,372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..512
                     /gene="LOC107895182"
                     /coded_by="XM_016820441.2:105..1643"
                     /db_xref="GeneID:107895182"
ORIGIN      
        1 mefgiplfhi fisfllvlli airsvrkska rsltqrlipg prklplignl hqladstlph
       61 rtlrdlatky gavmhlqlsq vstvvissae maeeimkthd ivfasrplll aakiityect
      121 divfspygky wrnlrkicts ellsasrvas frsireeevl nlvktiksnd glavnlsqkv
      181 fsmtygitar aafgkkckyq dsfisvaaeq tklvsgffvs effpslqfld vasgvkyrve
      241 kthaeadril qsivndhkes rargrskddr edlvdlllrl qeddefpltd nsvkaiildi
      301 ftagsetsas tvewalsemi knprvmtkaq aevrqvfqgk gnvdetgihq lqylkcvike
      361 tlrlhpilpl llprecgknc eingfeipsk trviinawai grdpnhwaqp ekfeperfin
      421 ssvdflgtnf efipfgagrr icpgmlfavp nlelplaqll fhfdwklpkq edidmteefa
      481 lsvrrktdlv lvptpyhasi ivsykhkedi fv
//
LOCUS       XP_016675927             346 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 [Gossypium hirsutum].
ACCESSION   XP_016675927
VERSION     XP_016675927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820438.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..346
                     /product="two-pore potassium channel 1"
                     /calculated_mol_wt=37958
     Region          <95..150
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          191..266
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..346
                     /gene="LOC107895179"
                     /coded_by="XM_016820438.2:157..1197"
                     /db_xref="GeneID:107895179"
ORIGIN      
        1 mlghfnsiia maanaakqtk lpmaatdspn ltndkngpkk ttfqsckats vatncdprtn
       61 lpdlkwlgly yviyigagtl sflalrnhir gkktndfids lymsvvtmtt vgygdlvphd
      121 flsqvvctgf itvgmllfgi vvklaakylv fkqqkvlina lhtarkmgpm ealneiesie
      181 idytkciisl iamavhfvig vsvlvnvegm eiedavycac ttmttvgfgd esfssefgrm
      241 fgvlwiftgt sclgqlflyv aevytdieak klvkwviasn iidkkdfeaa dnlekgkvhg
      301 aadfilyklk evrkikqedi scamkdagvd drsvfdvipa qssekk
//
LOCUS       XP_016675928             346 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 [Gossypium hirsutum].
ACCESSION   XP_016675928
VERSION     XP_016675928.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820439.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..346
                     /product="two-pore potassium channel 1"
                     /calculated_mol_wt=37958
     Region          <95..150
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          191..266
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..346
                     /gene="LOC107895179"
                     /coded_by="XM_016820439.2:116..1156"
                     /db_xref="GeneID:107895179"
ORIGIN      
        1 mlghfnsiia maanaakqtk lpmaatdspn ltndkngpkk ttfqsckats vatncdprtn
       61 lpdlkwlgly yviyigagtl sflalrnhir gkktndfids lymsvvtmtt vgygdlvphd
      121 flsqvvctgf itvgmllfgi vvklaakylv fkqqkvlina lhtarkmgpm ealneiesie
      181 idytkciisl iamavhfvig vsvlvnvegm eiedavycac ttmttvgfgd esfssefgrm
      241 fgvlwiftgt sclgqlflyv aevytdieak klvkwviasn iidkkdfeaa dnlekgkvhg
      301 aadfilyklk evrkikqedi scamkdagvd drsvfdvipa qssekk
//
LOCUS       XP_016679326             330 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 11 [Gossypium hirsutum].
ACCESSION   XP_016679326
VERSION     XP_016679326.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823837.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..330
                     /product="zinc transporter 11"
                     /calculated_mol_wt=35549
     Region          46..326
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..330
                     /gene="LOC107898322"
                     /coded_by="XM_016823837.2:55..1047"
                     /db_xref="GeneID:107898322"
ORIGIN      
        1 mkvssflffl flylslflsd tshggsdddn dtasnkrhnl rskslvlvki wclilvfvgt
       61 fisgvspyfl kwnqgflvlg tqfaggvflg taimhflsda netfedlttk qypfafmltc
      121 vgylvtmvad svvsyvygkg kgsschtndl elhgtgtgtd aacersssls svssfgdsvl
      181 livalcfhsv fegiaigvte teadawkalw iislhkifaa igmgiallrm ipdrpflsci
      241 ayafafaiss pagvaigiil dattegvmad wifaismgla cgvfiyvsin hllskgytph
      301 ktvsvdkphy kflavllgvg viavvmiwdn
//
LOCUS       XP_016679593             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016679593
VERSION     XP_016679593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016824104.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36858
     CDS             1..335
                     /gene="LOC107898604"
                     /coded_by="XM_016824104.2:242..1249"
                     /db_xref="GeneID:107898604"
ORIGIN      
        1 magiailldl yrknpsfcsq esfhssgffs asaaaasaaa tvvagtpfas rflfgnpkvs
       61 hcdaaaafpe dylsnvqrls edivknvknl kndalkyavk eykvelkply safelrpfam
      121 ttlrsflmfy lpllepatnv eeddedflqd tpkeqhvdlv vpfkksvkqi irettvvttr
      181 rvlerlaviy vsqrmawkll kdvpksavrk sqrglpttvy ffrvsrttfr ghllgvvaaa
      241 lvqtgieiyr cfcrktnsee sdevnlteqt kllgkkisdi tircgaslvf asigagigav
      301 lfrpsvgqwi gcaagdlagp iivsvcleka fhvnl
//
LOCUS       XP_016679324             360 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase QRT1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016679324
VERSION     XP_016679324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823835.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..360
                     /product="pectinesterase QRT1 isoform X1"
                     /calculated_mol_wt=40146
     Region          6..360
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..360
                     /gene="LOC107898320"
                     /coded_by="XM_016823835.2:150..1232"
                     /db_xref="GeneID:107898320"
ORIGIN      
        1 mdyccvlvmv imtlfascfg vglsktneiy vknfiswddm kvdghkirln tstvyhnqsr
       61 vivvdknggg dsitvqeavn mvpeynkqrv kiyilpgiyr ekvvvprfkp yisfvgnegq
      121 mantiiswhd kasdrnsngg slgtyrsasv tvgsdyfcat ditfentvig apgepgrqav
      181 alriygdkam fykvkivggq dtlldetgsh yfyhsviqgs vdfisgksrs lyqecliqst
      241 akkigaiaah hrdlpddntg fsfvsciitg sgkvylgraw gnysrtiysn cyfdnviipa
      301 gwsdwndplr hktvefgefq swgtgsdtsg rvpwskklty eeakpfmdik fidgkqwlkl
//
LOCUS       XP_016679325             323 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase QRT1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016679325
VERSION     XP_016679325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823836.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="pectinesterase QRT1 isoform X2"
                     /calculated_mol_wt=35813
     Region          6..312
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..323
                     /gene="LOC107898320"
                     /coded_by="XM_016823836.2:150..1121"
                     /db_xref="GeneID:107898320"
ORIGIN      
        1 mdyccvlvmv imtlfascfg vglsktneiy vknfiswddm kvdghkirln tstvyhnqsr
       61 vivvdknggg dsitvqeavn mvpeynkqrv kiyilpgiyr ekvvvprfkp yisfvgnegq
      121 mantiiswhd kasdrnsngg slgtyrsasv tvgsdyfcat ditfentvig apgepgrqav
      181 alriygdkam fykvkivggq dtlldetgsh yfyhsviqgs vdfisgksrs lyqecliqst
      241 akkigaiaah hrdlpddntg fsfvsciitg sgkvylgraw gnysrtiysn cyfdnviipa
      301 gwsdwndplr hkirgipelg nri
//
LOCUS       XP_016679592             136 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H3.2 [Gossypium hirsutum].
ACCESSION   XP_016679592
VERSION     XP_016679592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016824103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..136
                     /product="histone H3.2"
                     /calculated_mol_wt=15137
     Region          1..136
                     /region_name="PTZ00018"
                     /note="histone H3; Provisional"
                     /db_xref="CDD:185400"
     Site            order(40..48,50,64..67,70,73,84..87,117..119,121)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(45,48,51..52,55..56,58,60,62..63,67..68,70..72,
                     74..75,77,79,82..86,88..89,92..93,96..98,100..102,
                     104..106,109,118..122,126,129)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(49,52..53,56..57,59,95,99,102,109,113,118)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(107,110..111,114..115,117,123..124,127..128,
                     130..132)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..136
                     /gene="LOC107898602"
                     /coded_by="XM_016824103.2:259..669"
                     /db_xref="GeneID:107898602"
ORIGIN      
        1 martkqtark stggkaprkq latkaarksa patggvkkph rfrpgtvalr eirkyqkste
       61 llirklpfqr lvreiaqdfk tdlrfqssav aalqeaaeay lvglfedtnl caihakrvti
      121 mpkdiqlarr irgera
//
LOCUS       XP_016679590             389 aa            linear   PLN 06-AUG-2024
DEFINITION  serine acetyltransferase 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016679590
VERSION     XP_016679590.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016824101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..389
                     /product="serine acetyltransferase 1, chloroplastic"
                     /calculated_mol_wt=42186
     Region          24..389
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(255,257,272,306,336,339,341)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:100045"
     Site            order(271..272,291..292,298..299,306..307,318,333,
                     335..336,339,341,349,354)
                     /site_type="active"
                     /db_xref="CDD:100045"
     Site            order(271..272,298,306..307)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100045"
     Site            order(291..292,298..299,318,333,335..336,339,341,349,354)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:100045"
     CDS             1..389
                     /gene="LOC107898601"
                     /coded_by="XM_016824101.2:88..1257"
                     /db_xref="GeneID:107898601"
ORIGIN      
        1 mkvlgtprpl plaldtndsr vlshthssps vlsstkhshk lsksmatcid tsrttepsrv
       61 sqrpnrsqpd eihykyvkfc rptftdhvss ipfsenhtng ihtrkiadls feeegevaei
      121 gslwlkmnee arldaeqepi lsnyyyssil sqnslecala nhlsiklsns slpsctlfdi
      181 fmgvvledkg ivkavkedlk avkerdpaci syvhcflnyk gflacqahri ahnlwsqgrk
      241 vlalliqnrv sevfavdihp gakigsgvff dhatgvvvge tavignnvsi lhnvtlggtg
      301 kvcgdrhpki gdgvligagt cilgnikigd aakigagsvv lkdvppktta vgnparligg
      361 lenpvkldki psfimdhtsh itewpdyvi
//
LOCUS       XP_016679589             508 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 71D10 [Gossypium hirsutum].
ACCESSION   XP_016679589
VERSION     XP_016679589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016824100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..508
                     /product="cytochrome P450 71D10"
                     /calculated_mol_wt=57799
     Region          68..494
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(105,130,134,142,187,302,305..306,309..310,369,
                     373..374,376,436..439,442..446,449..450)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(209,213,238,301,304..305,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..508
                     /gene="LOC107898600"
                     /coded_by="XM_016824100.2:138..1664"
                     /db_xref="GeneID:107898600"
ORIGIN      
        1 melqlpsfqv llsillvsff ifrslkkskp knpdlkpipg prkfpvignl hqiaspsphk
       61 tlrdlalkhg plmhlqlgei stvivsspev akevtkthdi nfsyrpamev prvytydftn
      121 iafapygnyw rylrkvcnte lltasrvqsf rsireaevln lvktiheseg kpvnlsdmif
      181 smtygivara afgkkckdqq tyidsitelt kllsgfslsd fypsikplql fsgmktkvek
      241 mhkendkiia niikehrerr areksgqaea eqedlvdvll riqeenefpl adkniksviv
      301 dvfgagsets sttvewalse miknpwvmke aqaevrrvfg pkgnvdetgl helkylkavi
      361 retfrirpsv plllprechq aceingyhvp ektrvlinaw algrdpnywn epdkfnperf
      421 lngsvdytgt nyefipfgag rrmcpgitfa tpnlelplah llfhfdwklp ngmkgedldm
      481 sevfgmtvkr ktelvliptp yhgskivh
//
LOCUS       XP_040941205             249 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941205
VERSION     XP_040941205.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085271.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..249
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28271
     Region          132..>153
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..249
                     /gene="LOC121212476"
                     /coded_by="XM_041085271.1:1458..2207"
                     /db_xref="GeneID:121212476"
ORIGIN      
        1 msemrslses aegwlrdkdp rtwsrahfst kcksdlllnn nnecfnkiil eardkpiltm
       61 leiirrkvmt rlvsmreaae kypgplcpri qkklfeivsq snniwpvyag nekyevdcgl
      121 gnkhvvdlln sscscrkwdl sgipckhavs cmqllavspe tyvntcytvt tqlniyshli
      181 npvkgpiqwe hvrdmepilp piirkppgrp kqtrrkevge erksgpklsk igqqanctkc
      241 gkpghntrt
//
LOCUS       XP_040941206             565 aa            linear   PLN 06-AUG-2024
DEFINITION  FRIGIDA-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941206
VERSION     XP_040941206.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085272.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..565
                     /product="FRIGIDA-like protein 1"
                     /calculated_mol_wt=62022
     Region          148..425
                     /region_name="Frigida"
                     /note="Frigida-like protein; pfam07899"
                     /db_xref="CDD:462311"
     CDS             1..565
                     /gene="LOC121212477"
                     /coded_by="XM_041085272.1:77..1774"
                     /db_xref="GeneID:121212477"
ORIGIN      
        1 mssenrsatp slssiesaik lidvkkdelk rafddlqans qrlssfsisw sdldshftal
       61 qnsvtqrfri llsreaihnp idhvptqpla skqgdpsaph plteqdpvds vvnqplthll
      121 pldsdkpsss nslsvqsdgs vppsgnidsv vtrpelkkfc ermdgkglrk yindhvkere
      181 airmelpcal qsatdpgamv ldamegfyae nsqskgekdp eflglrrvcv vlleqlmetg
      241 lsfseevrer akklalewkg kvrlrkdnsl etsaflhlva tyslgamfdk eelvdyffti
      301 akfrqatmlc rsiglgekvh dliqklldsg kqllavrfif efglaekfsp mplleeylne
      361 tkklaqqvcq ngkntlksqn eaaskeigal ksvikiieeh kletqysrep fqkrieqlek
      421 qlanrkppat paapkpqqlq asqpvaqqak kkkkqaqgkq qqsankhpkt tasvvhaapl
      481 lsaagstsav apfqppglll dhsaaylsss pipfgfpgpt avnpyagpsa amyglagpsa
      541 amyasqvplq slcrpisyls irlcp
//
LOCUS       XP_040941207             362 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941207
VERSION     XP_040941207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085273.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42014
     CDS             1..362
                     /gene="LOC107895231"
                     /coded_by="XM_041085273.1:754..1842"
                     /db_xref="GeneID:107895231"
ORIGIN      
        1 meesitqite kgavvrdwsl kiqkekgdsl vegcvanlpe hitvnvrqnn ledlvriwnq
       61 wdsdtrdift erygdiahli tirideqliq vmvrfwdpay qcftfnqedm tptieeyaal
      121 lrinnvqfgk iyvkepksmt fkkklvrltd mtdawaekqi kkkneticil wsslrdlaln
      181 hpnmlkrvnl falaiyglvi fpkvlghlev avvdfferlk qginpvptil aetfrslnsc
      241 rrkgegrfig caqllnvwil shfwkvertp fhmfsktfsp leaylkkewp kevteqhwvs
      301 vfqnlraeni tlrapwirps vllykcgsqd wvpllglwgg vgyapllvqr qfssrqflpa
      361 tg
//
LOCUS       XP_040941208             362 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941208
VERSION     XP_040941208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085274.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42014
     CDS             1..362
                     /gene="LOC107895231"
                     /coded_by="XM_041085274.1:698..1786"
                     /db_xref="GeneID:107895231"
ORIGIN      
        1 meesitqite kgavvrdwsl kiqkekgdsl vegcvanlpe hitvnvrqnn ledlvriwnq
       61 wdsdtrdift erygdiahli tirideqliq vmvrfwdpay qcftfnqedm tptieeyaal
      121 lrinnvqfgk iyvkepksmt fkkklvrltd mtdawaekqi kkkneticil wsslrdlaln
      181 hpnmlkrvnl falaiyglvi fpkvlghlev avvdfferlk qginpvptil aetfrslnsc
      241 rrkgegrfig caqllnvwil shfwkvertp fhmfsktfsp leaylkkewp kevteqhwvs
      301 vfqnlraeni tlrapwirps vllykcgsqd wvpllglwgg vgyapllvqr qfssrqflpa
      361 tg
//
LOCUS       XP_040941210             523 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF9, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040941210
VERSION     XP_040941210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085276.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..523
                     /product="transcription termination factor MTERF9,
                     chloroplastic"
                     /calculated_mol_wt=60196
     Region          <250..472
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..523
                     /gene="LOC107894379"
                     /coded_by="XM_041085276.1:222..1793"
                     /db_xref="GeneID:107894379"
ORIGIN      
        1 maalsvhnfn hlvlilssps sssfwnlsfa fnnevrfkkg kflvflsths npkilksnkk
       61 srfgqritry dtdqeeeede deefddnddg magddwlmnd dfaqpheyvv ngkkiksrkg
      121 sgregnrrlq eqrkgskalk srqgliised qmdvrhgndg lkrksvgnsy rsstktkeag
      181 sfdvdggrml vsktsrenry qrlsdeidld ekwfplldyl stfglkdthf iqmyerhmps
      241 lqinvcsaqe rldyllsvgv kqrdvrrill rqpqileytv ennlkshvaf lmslgipssr
      301 igqiiacaps lfsysvensl kptvryliee vginehdlgk vvqlspqilv qridiswntr
      361 ymflskelga prdsivkmvk khpqllhysi ddgllprinf lrsigmrnsd ilkvltsltq
      421 vlslslednl kpkylyline lnnevhsltk ypmylslsld qrirprhrfl vslkkapkgp
      481 fplgslvpsd ecfcqqwagt sldkylafrq rlllkefakk yek
//
LOCUS       XP_040941211             523 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF9, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040941211
VERSION     XP_040941211.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085277.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..523
                     /product="transcription termination factor MTERF9,
                     chloroplastic"
                     /calculated_mol_wt=60196
     Region          <250..472
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..523
                     /gene="LOC107894379"
                     /coded_by="XM_041085277.1:222..1793"
                     /db_xref="GeneID:107894379"
ORIGIN      
        1 maalsvhnfn hlvlilssps sssfwnlsfa fnnevrfkkg kflvflsths npkilksnkk
       61 srfgqritry dtdqeeeede deefddnddg magddwlmnd dfaqpheyvv ngkkiksrkg
      121 sgregnrrlq eqrkgskalk srqgliised qmdvrhgndg lkrksvgnsy rsstktkeag
      181 sfdvdggrml vsktsrenry qrlsdeidld ekwfplldyl stfglkdthf iqmyerhmps
      241 lqinvcsaqe rldyllsvgv kqrdvrrill rqpqileytv ennlkshvaf lmslgipssr
      301 igqiiacaps lfsysvensl kptvryliee vginehdlgk vvqlspqilv qridiswntr
      361 ymflskelga prdsivkmvk khpqllhysi ddgllprinf lrsigmrnsd ilkvltsltq
      421 vlslslednl kpkylyline lnnevhsltk ypmylslsld qrirprhrfl vslkkapkgp
      481 fplgslvpsd ecfcqqwagt sldkylafrq rlllkefakk yek
//
LOCUS       XP_040941212             570 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 20 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941212
VERSION     XP_040941212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085278.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..570
                     /product="probable WRKY transcription factor 20 isoform
                     X1"
                     /calculated_mol_wt=61435
     Region          224..279
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          387..444
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..570
                     /gene="LOC107895229"
                     /coded_by="XM_041085278.1:202..1914"
                     /db_xref="GeneID:107895229"
ORIGIN      
        1 meeqilasss aaaaaaaasa sasatqhdls asaassgary klvapaklpi srsacitipp
       61 glspssfles pvllsdvkae pspttgslik pqavhgsvns stysvtaacs nafdernpsc
      121 fefrphprsn lapadlnhlr seqslqiqgq fqtisynssa lvksemagss nelslsvpfh
      181 tatsvasasa eidvdelnqs gnsnsgmlsg qtdhrvsgss tisddgynwr kygqkhvkgs
      241 efprsyykct hpncevkklf ershdgqite iiykgthdhp kpqpsrryss gntmsvqeer
      301 fdkvppltgr ddkssnmygq mahsiepnnt adsspvtand dnvddvdddd pfskrrkmdg
      361 gidiipvvkp ireprvvvqt lsevdilddg yrwrkygqkv vrgnpnprsy ykctsagcpv
      421 rkhierashd pkavittyeg khnhdvptak tsshdiagpv tvnalsrirs eendaisldl
      481 gvgispapen ssnehqqlhs evvqshhqtg gssfklhqvt pmtayygvpn ggmnqygsre
      541 apsegltvdi tplnhsyays qtmgriltgp
//
LOCUS       XP_040941213             405 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 20 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941213
VERSION     XP_040941213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085279.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..405
                     /product="probable WRKY transcription factor 20 isoform
                     X2"
                     /calculated_mol_wt=44408
     Region          59..114
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          222..279
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..405
                     /gene="LOC107895229"
                     /coded_by="XM_041085279.1:970..2187"
                     /db_xref="GeneID:107895229"
ORIGIN      
        1 magssnelsl svpfhtatsv asasaeidvd elnqsgnsns gmlsgqtdhr vsgsstisdd
       61 gynwrkygqk hvkgsefprs yykcthpnce vkklfershd gqiteiiykg thdhpkpqps
      121 rryssgntms vqeerfdkvp pltgrddkss nmygqmahsi epnntadssp vtanddnvdd
      181 vddddpfskr rkmdggidii pvvkpirepr vvvqtlsevd ilddgyrwrk ygqkvvrgnp
      241 nprsyykcts agcpvrkhie rashdpkavi ttyegkhnhd vptaktsshd iagpvtvnal
      301 srirseenda isldlgvgis papenssneh qqlhsevvqs hhqtggssfk lhqvtpmtay
      361 ygvpnggmnq ygsreapseg ltvditplnh syaysqtmgr iltgp
//
LOCUS       XP_040941214             405 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 20 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941214
VERSION     XP_040941214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085280.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..405
                     /product="probable WRKY transcription factor 20 isoform
                     X2"
                     /calculated_mol_wt=44408
     Region          59..114
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          222..279
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..405
                     /gene="LOC107895229"
                     /coded_by="XM_041085280.1:962..2179"
                     /db_xref="GeneID:107895229"
ORIGIN      
        1 magssnelsl svpfhtatsv asasaeidvd elnqsgnsns gmlsgqtdhr vsgsstisdd
       61 gynwrkygqk hvkgsefprs yykcthpnce vkklfershd gqiteiiykg thdhpkpqps
      121 rryssgntms vqeerfdkvp pltgrddkss nmygqmahsi epnntadssp vtanddnvdd
      181 vddddpfskr rkmdggidii pvvkpirepr vvvqtlsevd ilddgyrwrk ygqkvvrgnp
      241 nprsyykcts agcpvrkhie rashdpkavi ttyegkhnhd vptaktsshd iagpvtvnal
      301 srirseenda isldlgvgis papenssneh qqlhsevvqs hhqtggssfk lhqvtpmtay
      361 ygvpnggmnq ygsreapseg ltvditplnh syaysqtmgr iltgp
//
LOCUS       XP_016675995             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675995
VERSION     XP_016675995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31165
     CDS             1..274
                     /gene="LOC107895230"
                     /coded_by="XM_016820506.2:553..1377"
                     /db_xref="GeneID:107895230"
ORIGIN      
        1 msergktige mlavwvslke nvncvaklsd vvgrpekncg nsrtqnpeke lvhqlrnpfr
       61 ealfrpihpk tqfcelnvgd psrniielif qsasmdpsks kpswkikrvl kvknsievlk
      121 rfedyrekvi kkanqqherh prstidgnel llfygttmac crkpkpvpel ckdpscracr
      181 iihsrfdmef trkngvrlst sseevcdnmv sfklkklkra vivcrviags igntidrtre
      241 dfdsigrlgp hsnleylvvp npsailpcfl ivfn
//
LOCUS       XP_040941215             578 aa            linear   PLN 06-AUG-2024
DEFINITION  FRIGIDA-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941215
VERSION     XP_040941215.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085281.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..578
                     /product="FRIGIDA-like protein 1"
                     /calculated_mol_wt=63545
     Region          148..425
                     /region_name="Frigida"
                     /note="Frigida-like protein; pfam07899"
                     /db_xref="CDD:462311"
     CDS             1..578
                     /gene="LOC121212478"
                     /coded_by="XM_041085281.1:86..1822"
                     /db_xref="GeneID:121212478"
ORIGIN      
        1 mssenrsatp slssiesaik lidvkkdelk rafddlqans qrlssfsisw sdldshftal
       61 qnsvtqrfri llsreaihnp idhvptqpla skqgdpsaph plteqdpvds vvnqplthll
      121 pldsdkpsss nslsvqsdgs vppsgnidsv vtrpelkkfc ermdgkglrk yindhvkere
      181 airmelpcal qsatdpgamv ldamegfyae nsqskgekdp eflglrrvcv vlleqlmetg
      241 lsfseevrer akklalewkg kvrlrkdnsl etsaflhlva tyslgamfdk eelvdyffti
      301 akfrqatmlc rsiglgekvh dliqklldsg kqllavrfif efglaekfsp vplleeylne
      361 tkklaqqvcq ngkntlksqn eatskeigal ksvikiieeh kletqysrep lqkrieqlek
      421 qlanrkppat paapkpqqlq asqpvaqqak kkkkqaqgkq qqsankhpkt tasvvhaapl
      481 lsaagstsav apfqppglll dhsaaylsss pipfgfpgpt avnpyagpsa amyglagapm
      541 gfpvnpnssa shlynydrlp tygaygfppq fhpsyhpk
//
LOCUS       XP_016675994             597 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At2g26730 [Gossypium hirsutum].
ACCESSION   XP_016675994
VERSION     XP_016675994.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820505.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..597
                     /product="probable inactive receptor kinase At2g26730"
                     /calculated_mol_wt=67139
     Region          <55..168
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          84..103
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          104..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..556
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(303..305,308,310,322,324,352,368..371,424,428..429,
                     431,441..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..597
                     /gene="LOC107895226"
                     /coded_by="XM_016820505.2:597..2390"
                     /db_xref="GeneID:107895226"
ORIGIN      
        1 mqrkggfdlf lnrltciavv saliktcmgg elyesksffs firsvdpqne lgiqwnhlsq
       61 npclhkpngv kcnlqatsil eirlenlnls gvidadalck lrklqvlsls rnlihgtips
      121 sisycirlry lnlssnslsg rvphtltklk ylksldisnn hftnigpsig kefdhsnkyl
      181 kkpvslqsdg hlnttrkdeh aagalkdsse dnsidllvvl iplylgfgfl fvflyhmrkr
      241 adkiakekea qkvlketplk lspinaiqev kqevrnqelv ffvednqsfk lddlleasad
      301 lqsqgicssl ykvilknnat yavkrlkklq vsfeefsqtm trignlkhrn ilplvgynct
      361 neekllfyky qnnrsllnll qgyiegkref pwrlrltias glarglafiy qnpndadeii
      421 phgnlklsni llgesmepli seygisrlld pkknslfsng ytapekslse kgdvfsfgvi
      481 llelltgktv ektgvdlpkw vksmvreewt gevfdkevtk talqwafpll nialkcasys
      541 pldrpttsev letidealfa hddhsvssms swesghpdcc ilhtvisetw dtpgsnc
//
LOCUS       XP_016675989            1193 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675989
VERSION     XP_016675989.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820500.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1193
                     /product="kinesin-like protein KIN-12F isoform X1"
                     /calculated_mol_wt=133633
     Region          43..1190
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1193
                     /gene="LOC107895225"
                     /coded_by="XM_016820500.2:233..3814"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkqkdmv eseeqngdlt nldpsvkvvv
      121 rirpingqek evdrtvtkvs sdslsvggrk ftfdsvldan ssqenvfqli gvplvknala
      181 gyntsvlsyg qtgsgktytm wgppsamved pspashqgiv prifqmlfse iqreqensdg
      241 rqtnyqcrcs fleiyneqig dlldptqrnl eikddpkngl yvenlteeyv ssyedvtqvl
      301 ikglssrkvg attvnskssr shivftffie swckqgassk cfsssktsri slidlagldr
      361 nkledvgrqh lqegknvkks lsqlgylvnt laketqpekp edvpyggscl trilreslgg
      421 nakltvmcni sadnsrntse ilstlrfgqr vkavrnepvi neiseddvng lsdqirqlke
      481 eliraksday ssvgsksgyf kgwnaresln qlrislnrsl ilpridneye eeinigeddv
      541 kelrqqldyl dsscetnlrd pldkrgsiqs svkescetdl lseydihcpk eteieeidev
      601 evppmsspep addlsvtskt lkavdpsirn sisisphrrs sileeptlse spkiannlrk
      661 smavpsalla sqknvsesse sevlrellky sdhirsslrt sktflgptes laaslqrgrq
      721 iidqhqhssv pnrssvafsf ehlmlkpspe adkanasvqt lpndkpspdg sstplfcssc
      781 qrkfdnnhpd evqdslktwi vtvdnqqrdg rntveeaskk ektlesvcke qaakiepltq
      841 lvkkyklere nsaiehapep lkneiilfde qsnngengke yfdmtekeal lqeiqtlksk
      901 lqsytaspsp nksteilrss llsrsiqlrk svdcrnnsee elererqrwm emesdwislt
      961 delrmdlesn rcraekveme lklekkctee lddalsravl gharmvehya dlqekyndlv
     1021 skhraimegi aeikkaaaka gskghgarfa kslaaelsai rvererekeq lkkenrslrt
     1081 qlrdtaeavh aagellvrlr eaeqaasiae enfsnvqqen eklkkqadkl krkhkmemvt
     1141 mkqylaesrl pesalqplyr edsdvaashn ssaipyddqa wraefgaiyq ehy
//
LOCUS       XP_016675990            1192 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675990
VERSION     XP_016675990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820501.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1192
                     /product="kinesin-like protein KIN-12F isoform X2"
                     /calculated_mol_wt=133505
     Region          43..1189
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1192
                     /gene="LOC107895225"
                     /coded_by="XM_016820501.2:237..3815"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkkdmve seeqngdltn ldpsvkvvvr
      121 irpingqeke vdrtvtkvss dslsvggrkf tfdsvldans sqenvfqlig vplvknalag
      181 yntsvlsygq tgsgktytmw gppsamvedp spashqgivp rifqmlfsei qreqensdgr
      241 qtnyqcrcsf leiyneqigd lldptqrnle ikddpkngly venlteeyvs syedvtqvli
      301 kglssrkvga ttvnskssrs hivftffies wckqgasskc fsssktsris lidlagldrn
      361 kledvgrqhl qegknvkksl sqlgylvntl aketqpekpe dvpyggsclt rilreslggn
      421 akltvmcnis adnsrntsei lstlrfgqrv kavrnepvin eiseddvngl sdqirqlkee
      481 liraksdays svgsksgyfk gwnareslnq lrislnrsli lpridneyee einigeddvk
      541 elrqqldyld sscetnlrdp ldkrgsiqss vkescetdll seydihcpke teieeideve
      601 vppmsspepa ddlsvtsktl kavdpsirns isisphrrss ileeptlses pkiannlrks
      661 mavpsallas qknvsesses evlrellkys dhirsslrts ktflgptesl aaslqrgrqi
      721 idqhqhssvp nrssvafsfe hlmlkpspea dkanasvqtl pndkpspdgs stplfcsscq
      781 rkfdnnhpde vqdslktwiv tvdnqqrdgr ntveeaskke ktlesvckeq aakiepltql
      841 vkkykleren saiehapepl kneiilfdeq snngengkey fdmtekeall qeiqtlkskl
      901 qsytaspspn ksteilrssl lsrsiqlrks vdcrnnseee lererqrwme mesdwisltd
      961 elrmdlesnr craekvemel klekkcteel ddalsravlg harmvehyad lqekyndlvs
     1021 khraimegia eikkaaakag skghgarfak slaaelsair vererekeql kkenrslrtq
     1081 lrdtaeavha agellvrlre aeqaasiaee nfsnvqqene klkkqadklk rkhkmemvtm
     1141 kqylaesrlp esalqplyre dsdvaashns saipyddqaw raefgaiyqe hy
//
LOCUS       XP_016675991            1192 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016675991
VERSION     XP_016675991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820502.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1192
                     /product="kinesin-like protein KIN-12F isoform X3"
                     /calculated_mol_wt=133546
     Region          43..1189
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1192
                     /gene="LOC107895225"
                     /coded_by="XM_016820502.2:233..3811"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkqkdmv eseeqngdlt nldpsvkvvv
      121 rirpingqek evdrtvtkvs sdslsvggrk ftfdsvldan ssqenvfqli gvplvknala
      181 gyntsvlsyg qtgsgktytm wgppsamved pspashqgiv prifqmlfse iqreqensdg
      241 rqtnyqcrcs fleiyneqig dlldptqrnl eikddpkngl yvenlteeyv ssyedvtqvl
      301 ikglssrkvg attvnskssr shivftffie swckqgassk cfsssktsri slidlagldr
      361 nkledvgrqh lqegknvkks lsqlgylvnt laketqpekp edvpyggscl trilreslgg
      421 nakltvmcni sadnrntsei lstlrfgqrv kavrnepvin eiseddvngl sdqirqlkee
      481 liraksdays svgsksgyfk gwnareslnq lrislnrsli lpridneyee einigeddvk
      541 elrqqldyld sscetnlrdp ldkrgsiqss vkescetdll seydihcpke teieeideve
      601 vppmsspepa ddlsvtsktl kavdpsirns isisphrrss ileeptlses pkiannlrks
      661 mavpsallas qknvsesses evlrellkys dhirsslrts ktflgptesl aaslqrgrqi
      721 idqhqhssvp nrssvafsfe hlmlkpspea dkanasvqtl pndkpspdgs stplfcsscq
      781 rkfdnnhpde vqdslktwiv tvdnqqrdgr ntveeaskke ktlesvckeq aakiepltql
      841 vkkykleren saiehapepl kneiilfdeq snngengkey fdmtekeall qeiqtlkskl
      901 qsytaspspn ksteilrssl lsrsiqlrks vdcrnnseee lererqrwme mesdwisltd
      961 elrmdlesnr craekvemel klekkcteel ddalsravlg harmvehyad lqekyndlvs
     1021 khraimegia eikkaaakag skghgarfak slaaelsair vererekeql kkenrslrtq
     1081 lrdtaeavha agellvrlre aeqaasiaee nfsnvqqene klkkqadklk rkhkmemvtm
     1141 kqylaesrlp esalqplyre dsdvaashns saipyddqaw raefgaiyqe hy
//
LOCUS       XP_016675992            1192 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016675992
VERSION     XP_016675992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820503.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1192
                     /product="kinesin-like protein KIN-12F isoform X4"
                     /calculated_mol_wt=133505
     Region          43..1189
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1192
                     /gene="LOC107895225"
                     /coded_by="XM_016820503.2:233..3811"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkqkdmv eseeqngdlt nldpsvkvvv
      121 rirpingqek evdrtvtkvs sdslsvggrk ftfdsvldan ssqenvfqli gvplvknala
      181 gyntsvlsyg qtgsgktytm wgppsamved pspashqgiv prifqmlfse iqreqensdg
      241 rqtnyqcrcs fleiyneqig dlldptqrnl eikddpkngl yvenlteeyv ssyedvtqvl
      301 ikglssrkvg attvnskssr shivftffie swckgasskc fsssktsris lidlagldrn
      361 kledvgrqhl qegknvkksl sqlgylvntl aketqpekpe dvpyggsclt rilreslggn
      421 akltvmcnis adnsrntsei lstlrfgqrv kavrnepvin eiseddvngl sdqirqlkee
      481 liraksdays svgsksgyfk gwnareslnq lrislnrsli lpridneyee einigeddvk
      541 elrqqldyld sscetnlrdp ldkrgsiqss vkescetdll seydihcpke teieeideve
      601 vppmsspepa ddlsvtsktl kavdpsirns isisphrrss ileeptlses pkiannlrks
      661 mavpsallas qknvsesses evlrellkys dhirsslrts ktflgptesl aaslqrgrqi
      721 idqhqhssvp nrssvafsfe hlmlkpspea dkanasvqtl pndkpspdgs stplfcsscq
      781 rkfdnnhpde vqdslktwiv tvdnqqrdgr ntveeaskke ktlesvckeq aakiepltql
      841 vkkykleren saiehapepl kneiilfdeq snngengkey fdmtekeall qeiqtlkskl
      901 qsytaspspn ksteilrssl lsrsiqlrks vdcrnnseee lererqrwme mesdwisltd
      961 elrmdlesnr craekvemel klekkcteel ddalsravlg harmvehyad lqekyndlvs
     1021 khraimegia eikkaaakag skghgarfak slaaelsair vererekeql kkenrslrtq
     1081 lrdtaeavha agellvrlre aeqaasiaee nfsnvqqene klkkqadklk rkhkmemvtm
     1141 kqylaesrlp esalqplyre dsdvaashns saipyddqaw raefgaiyqe hy
//
LOCUS       XP_040941216            1191 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941216
VERSION     XP_040941216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085282.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1191
                     /product="kinesin-like protein KIN-12F isoform X5"
                     /calculated_mol_wt=133418
     Region          43..1188
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1191
                     /gene="LOC107895225"
                     /coded_by="XM_041085282.1:237..3812"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkkdmve seeqngdltn ldpsvkvvvr
      121 irpingqeke vdrtvtkvss dslsvggrkf tfdsvldans sqenvfqlig vplvknalag
      181 yntsvlsygq tgsgktytmw gppsamvedp spashqgivp rifqmlfsei qreqensdgr
      241 qtnyqcrcsf leiyneqigd lldptqrnle ikddpkngly venlteeyvs syedvtqvli
      301 kglssrkvga ttvnskssrs hivftffies wckqgasskc fsssktsris lidlagldrn
      361 kledvgrqhl qegknvkksl sqlgylvntl aketqpekpe dvpyggsclt rilreslggn
      421 akltvmcnis adnrntseil stlrfgqrvk avrnepvine iseddvngls dqirqlkeel
      481 iraksdayss vgsksgyfkg wnareslnql rislnrslil pridneyeee inigeddvke
      541 lrqqldylds scetnlrdpl dkrgsiqssv kescetdlls eydihcpket eieeidevev
      601 ppmsspepad dlsvtsktlk avdpsirnsi sisphrrssi leeptlsesp kiannlrksm
      661 avpsallasq knvsessese vlrellkysd hirsslrtsk tflgptesla aslqrgrqii
      721 dqhqhssvpn rssvafsfeh lmlkpspead kanasvqtlp ndkpspdgss tplfcsscqr
      781 kfdnnhpdev qdslktwivt vdnqqrdgrn tveeaskkek tlesvckeqa akiepltqlv
      841 kkyklerens aiehapeplk neiilfdeqs nngengkeyf dmtekeallq eiqtlksklq
      901 sytaspspnk steilrssll srsiqlrksv dcrnnseeel ererqrwmem esdwisltde
      961 lrmdlesnrc raekvemelk lekkcteeld dalsravlgh armvehyadl qekyndlvsk
     1021 hraimegiae ikkaaakags kghgarfaks laaelsairv ererekeqlk kenrslrtql
     1081 rdtaeavhaa gellvrlrea eqaasiaeen fsnvqqenek lkkqadklkr khkmemvtmk
     1141 qylaesrlpe salqplyred sdvaashnss aipyddqawr aefgaiyqeh y
//
LOCUS       XP_040941217            1191 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040941217
VERSION     XP_040941217.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085283.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1191
                     /product="kinesin-like protein KIN-12F isoform X6"
                     /calculated_mol_wt=133377
     Region          43..1188
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1191
                     /gene="LOC107895225"
                     /coded_by="XM_041085283.1:237..3812"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkkdmve seeqngdltn ldpsvkvvvr
      121 irpingqeke vdrtvtkvss dslsvggrkf tfdsvldans sqenvfqlig vplvknalag
      181 yntsvlsygq tgsgktytmw gppsamvedp spashqgivp rifqmlfsei qreqensdgr
      241 qtnyqcrcsf leiyneqigd lldptqrnle ikddpkngly venlteeyvs syedvtqvli
      301 kglssrkvga ttvnskssrs hivftffies wckgasskcf sssktsrisl idlagldrnk
      361 ledvgrqhlq egknvkksls qlgylvntla ketqpekped vpyggscltr ilreslggna
      421 kltvmcnisa dnsrntseil stlrfgqrvk avrnepvine iseddvngls dqirqlkeel
      481 iraksdayss vgsksgyfkg wnareslnql rislnrslil pridneyeee inigeddvke
      541 lrqqldylds scetnlrdpl dkrgsiqssv kescetdlls eydihcpket eieeidevev
      601 ppmsspepad dlsvtsktlk avdpsirnsi sisphrrssi leeptlsesp kiannlrksm
      661 avpsallasq knvsessese vlrellkysd hirsslrtsk tflgptesla aslqrgrqii
      721 dqhqhssvpn rssvafsfeh lmlkpspead kanasvqtlp ndkpspdgss tplfcsscqr
      781 kfdnnhpdev qdslktwivt vdnqqrdgrn tveeaskkek tlesvckeqa akiepltqlv
      841 kkyklerens aiehapeplk neiilfdeqs nngengkeyf dmtekeallq eiqtlksklq
      901 sytaspspnk steilrssll srsiqlrksv dcrnnseeel ererqrwmem esdwisltde
      961 lrmdlesnrc raekvemelk lekkcteeld dalsravlgh armvehyadl qekyndlvsk
     1021 hraimegiae ikkaaakags kghgarfaks laaelsairv ererekeqlk kenrslrtql
     1081 rdtaeavhaa gellvrlrea eqaasiaeen fsnvqqenek lkkqadklkr khkmemvtmk
     1141 qylaesrlpe salqplyred sdvaashnss aipyddqawr aefgaiyqeh y
//
LOCUS       XP_016675993            1191 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X7 [Gossypium hirsutum].
ACCESSION   XP_016675993
VERSION     XP_016675993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820504.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1191
                     /product="kinesin-like protein KIN-12F isoform X7"
                     /calculated_mol_wt=133418
     Region          43..1188
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1191
                     /gene="LOC107895225"
                     /coded_by="XM_016820504.2:233..3808"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkqkdmv eseeqngdlt nldpsvkvvv
      121 rirpingqek evdrtvtkvs sdslsvggrk ftfdsvldan ssqenvfqli gvplvknala
      181 gyntsvlsyg qtgsgktytm wgppsamved pspashqgiv prifqmlfse iqreqensdg
      241 rqtnyqcrcs fleiyneqig dlldptqrnl eikddpkngl yvenlteeyv ssyedvtqvl
      301 ikglssrkvg attvnskssr shivftffie swckgasskc fsssktsris lidlagldrn
      361 kledvgrqhl qegknvkksl sqlgylvntl aketqpekpe dvpyggsclt rilreslggn
      421 akltvmcnis adnrntseil stlrfgqrvk avrnepvine iseddvngls dqirqlkeel
      481 iraksdayss vgsksgyfkg wnareslnql rislnrslil pridneyeee inigeddvke
      541 lrqqldylds scetnlrdpl dkrgsiqssv kescetdlls eydihcpket eieeidevev
      601 ppmsspepad dlsvtsktlk avdpsirnsi sisphrrssi leeptlsesp kiannlrksm
      661 avpsallasq knvsessese vlrellkysd hirsslrtsk tflgptesla aslqrgrqii
      721 dqhqhssvpn rssvafsfeh lmlkpspead kanasvqtlp ndkpspdgss tplfcsscqr
      781 kfdnnhpdev qdslktwivt vdnqqrdgrn tveeaskkek tlesvckeqa akiepltqlv
      841 kkyklerens aiehapeplk neiilfdeqs nngengkeyf dmtekeallq eiqtlksklq
      901 sytaspspnk steilrssll srsiqlrksv dcrnnseeel ererqrwmem esdwisltde
      961 lrmdlesnrc raekvemelk lekkcteeld dalsravlgh armvehyadl qekyndlvsk
     1021 hraimegiae ikkaaakags kghgarfaks laaelsairv ererekeqlk kenrslrtql
     1081 rdtaeavhaa gellvrlrea eqaasiaeen fsnvqqenek lkkqadklkr khkmemvtmk
     1141 qylaesrlpe salqplyred sdvaashnss aipyddqawr aefgaiyqeh y
//
LOCUS       XP_040941218            1190 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12F isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040941218
VERSION     XP_040941218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085284.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1190
                     /product="kinesin-like protein KIN-12F isoform X8"
                     /calculated_mol_wt=133290
     Region          43..1187
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..1190
                     /gene="LOC107895225"
                     /coded_by="XM_041085284.1:237..3809"
                     /db_xref="GeneID:107895225"
ORIGIN      
        1 mkstaeaava engrflgsis tsslrnllpk sklkksikks nsentpppdp niiqinnsaq
       61 fspksplsks ltsdsfvnps dahpqislsm dssvkkdmve seeqngdltn ldpsvkvvvr
      121 irpingqeke vdrtvtkvss dslsvggrkf tfdsvldans sqenvfqlig vplvknalag
      181 yntsvlsygq tgsgktytmw gppsamvedp spashqgivp rifqmlfsei qreqensdgr
      241 qtnyqcrcsf leiyneqigd lldptqrnle ikddpkngly venlteeyvs syedvtqvli
      301 kglssrkvga ttvnskssrs hivftffies wckgasskcf sssktsrisl idlagldrnk
      361 ledvgrqhlq egknvkksls qlgylvntla ketqpekped vpyggscltr ilreslggna
      421 kltvmcnisa dnrntseils tlrfgqrvka vrnepvinei seddvnglsd qirqlkeeli
      481 raksdayssv gsksgyfkgw nareslnqlr islnrslilp ridneyeeei nigeddvkel
      541 rqqldyldss cetnlrdpld krgsiqssvk escetdllse ydihcpkete ieeidevevp
      601 pmsspepadd lsvtsktlka vdpsirnsis isphrrssil eeptlsespk iannlrksma
      661 vpsallasqk nvsessesev lrellkysdh irsslrtskt flgpteslaa slqrgrqiid
      721 qhqhssvpnr ssvafsfehl mlkpspeadk anasvqtlpn dkpspdgsst plfcsscqrk
      781 fdnnhpdevq dslktwivtv dnqqrdgrnt veeaskkekt lesvckeqaa kiepltqlvk
      841 kyklerensa iehapeplkn eiilfdeqsn ngengkeyfd mtekeallqe iqtlksklqs
      901 ytaspspnks teilrsslls rsiqlrksvd crnnseeele rerqrwmeme sdwisltdel
      961 rmdlesnrcr aekvemelkl ekkcteeldd alsravlgha rmvehyadlq ekyndlvskh
     1021 raimegiaei kkaaakagsk ghgarfaksl aaelsairve rerekeqlkk enrslrtqlr
     1081 dtaeavhaag ellvrlreae qaasiaeenf snvqqenekl kkqadklkrk hkmemvtmkq
     1141 ylaesrlpes alqplyreds dvaashnssa ipyddqawra efgaiyqehy
//
LOCUS       XP_016675988             208 aa            linear   PLN 06-AUG-2024
DEFINITION  chloroplastic import inner membrane translocase subunit TIM22-2
            [Gossypium hirsutum].
ACCESSION   XP_016675988
VERSION     XP_016675988.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820499.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..208
                     /product="chloroplastic import inner membrane translocase
                     subunit TIM22-2"
                     /calculated_mol_wt=21455
     Region          40..139
                     /region_name="Tim17"
                     /note="Tim17/Tim22/Tim23/Pmp24 family; pfam02466"
                     /db_xref="CDD:460567"
     CDS             1..208
                     /gene="LOC107895224"
                     /coded_by="XM_016820499.2:104..730"
                     /db_xref="GeneID:107895224"
ORIGIN      
        1 matsdspnts aesdietnpn pnsskaiipt psnsnspavc lfqfagdsaa gafmgsifgy
       61 gsglikkkgf kgsfveagsy aktfavlsgv hslvvcflkr lrgkddvina gvagcctgla
      121 lsfpgapqal lqscltfgaf sfiieglnkq qpalahsfsa rnesahhkgp rplalplsip
      181 ipdelkgafs sfckslvkpn kgrfptgn
//
LOCUS       XP_016675987             217 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S8 [Gossypium hirsutum].
ACCESSION   XP_016675987
VERSION     XP_016675987.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..217
                     /product="40S ribosomal protein S8"
                     /calculated_mol_wt=24596
     Region          1..212
                     /region_name="PTZ00148"
                     /note="40S ribosomal protein S8; Provisional"
                     /db_xref="CDD:240292"
     CDS             1..217
                     /gene="LOC107895223"
                     /coded_by="XM_016820498.2:157..810"
                     /db_xref="GeneID:107895223"
ORIGIN      
        1 mgisrdsmhk rratggkkka wrkkrkyelg rqpantklss nktvrrirvr ggnvkwralr
       61 ldtgnyswgs eavtrktril dvvynasnne lvrtqtlvks aivqvdaapf kqwylqhygi
      121 digrkkksaa akkegeeget ateevkksnh vlrklekrqq nrtldphiee qfgsgrllac
      181 issrpgqcgr adgyilegke lefymkkiqr kkgkgaa
//
LOCUS       XP_016675981             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675981
VERSION     XP_016675981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820492.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_016820492.2:774..1115"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_040941219             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941219
VERSION     XP_040941219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085285.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_041085285.1:913..1254"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_040941220             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941220
VERSION     XP_040941220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085286.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_041085286.1:688..1029"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_016675978             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675978
VERSION     XP_016675978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820489.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_016820489.2:983..1324"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_016675979             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675979
VERSION     XP_016675979.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820490.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_016820490.2:1038..1379"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_016675980             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675980
VERSION     XP_016675980.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_016820491.2:899..1240"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_016675982             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675982
VERSION     XP_016675982.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820493.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_016820493.2:540..881"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_016675983             113 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675983
VERSION     XP_016675983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820494.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="DNA polymerase kappa isoform X1"
                     /calculated_mol_wt=12198
     Region          1..>106
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..113
                     /gene="LOC107895222"
                     /coded_by="XM_016820494.2:369..710"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakvlfsv lgt
//
LOCUS       XP_016675984             111 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675984
VERSION     XP_016675984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820495.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="DNA polymerase kappa isoform X2"
                     /calculated_mol_wt=11925
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..111
                     /gene="LOC107895222"
                     /coded_by="XM_016820495.2:945..1280"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakalqsg s
//
LOCUS       XP_040941221             111 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941221
VERSION     XP_040941221.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085287.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="DNA polymerase kappa isoform X2"
                     /calculated_mol_wt=11925
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..111
                     /gene="LOC107895222"
                     /coded_by="XM_041085287.1:860..1195"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakalqsg s
//
LOCUS       XP_040941222             111 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941222
VERSION     XP_040941222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085288.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="DNA polymerase kappa isoform X2"
                     /calculated_mol_wt=11925
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..111
                     /gene="LOC107895222"
                     /coded_by="XM_041085288.1:774..1109"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakalqsg s
//
LOCUS       XP_040941223             111 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941223
VERSION     XP_040941223.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085289.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="DNA polymerase kappa isoform X2"
                     /calculated_mol_wt=11925
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..111
                     /gene="LOC107895222"
                     /coded_by="XM_041085289.1:539..874"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakalqsg s
//
LOCUS       XP_040941224             111 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941224
VERSION     XP_040941224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085290.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="DNA polymerase kappa isoform X2"
                     /calculated_mol_wt=11925
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..111
                     /gene="LOC107895222"
                     /coded_by="XM_041085290.1:687..1022"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllakalqsg s
//
LOCUS       XP_040941225             108 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941225
VERSION     XP_040941225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085291.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="DNA polymerase kappa isoform X3"
                     /calculated_mol_wt=11612
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..108
                     /gene="LOC107895222"
                     /coded_by="XM_041085291.1:860..1186"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllaksgs
//
LOCUS       XP_040941226             108 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941226
VERSION     XP_040941226.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085292.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="DNA polymerase kappa isoform X3"
                     /calculated_mol_wt=11612
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..108
                     /gene="LOC107895222"
                     /coded_by="XM_041085292.1:774..1100"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllaksgs
//
LOCUS       XP_040941227             108 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941227
VERSION     XP_040941227.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085293.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="DNA polymerase kappa isoform X3"
                     /calculated_mol_wt=11612
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..108
                     /gene="LOC107895222"
                     /coded_by="XM_041085293.1:912..1238"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllaksgs
//
LOCUS       XP_040941228             108 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941228
VERSION     XP_040941228.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085294.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="DNA polymerase kappa isoform X3"
                     /calculated_mol_wt=11612
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..108
                     /gene="LOC107895222"
                     /coded_by="XM_041085294.1:687..1013"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllaksgs
//
LOCUS       XP_016675985             108 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase kappa isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016675985
VERSION     XP_016675985.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820496.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="DNA polymerase kappa isoform X3"
                     /calculated_mol_wt=11612
     Region          1..>105
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..108
                     /gene="LOC107895222"
                     /coded_by="XM_016820496.2:987..1313"
                     /db_xref="GeneID:107895222"
ORIGIN      
        1 mavssmsmis tanyearkfg vcaamtgfia lklcpdlifi ptvfwdydpn fmaasldeay
       61 lditkvcekr sitgaenake lrsrvyeetg ltcsagvapn rllaksgs
//
LOCUS       XP_016675976             231 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-51 [Gossypium hirsutum].
ACCESSION   XP_016675976
VERSION     XP_016675976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820487.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..231
                     /product="syntaxin-51"
                     /calculated_mol_wt=25573
     Region          138..195
                     /region_name="SNARE_Qc"
                     /note="SNARE motif, subgroup Qc; cd15841"
                     /db_xref="CDD:277194"
     Site            order(142..145,147..149,151..153,155..156,158..163,
                     165..166,168..169,172..173,175..177,179..181,183..184,
                     186..187,190..191,193..194)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277194"
     Site            169
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277194"
     Region          171..222
                     /region_name="SNARE"
                     /note="SNARE domain; pfam05739"
                     /db_xref="CDD:461727"
     CDS             1..231
                     /gene="LOC107895220"
                     /coded_by="XM_016820487.2:391..1086"
                     /db_xref="GeneID:107895220"
ORIGIN      
        1 maassdpwik eyneavkiad dingmiseri slpasgpetq rhasairrki tilgtrldgl
       61 qslmsrptgk pltekemnrr kdmvanlrsk anqmasafnm snfanrdsll gpetkedams
      121 rtvgldnsgl vglqrqimke qdegleklee tvtstkhial avneeldlht rliddldqhv
      181 dvtdsrlrrv qknlailnkr tkggcscmcm llavigivil vvaiylliky l
//
LOCUS       XP_016675974             414 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division protein FtsZ homolog 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016675974
VERSION     XP_016675974.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820485.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..414
                     /product="cell division protein FtsZ homolog 1,
                     chloroplastic"
                     /calculated_mol_wt=43074
     Region          75..378
                     /region_name="FtsZ"
                     /note="Cell division GTPase FtsZ [Cell cycle control, cell
                     division, chromosome partitioning]; COG0206"
                     /db_xref="CDD:439976"
     CDS             1..414
                     /gene="LOC107895218"
                     /coded_by="XM_016820485.2:385..1629"
                     /db_xref="GeneID:107895218"
ORIGIN      
        1 matlqvtspk elisitasss lfssrlrsss knslkksflr trhrfggiac sfapmetaki
       61 kvvgvggggn navnrmigsg lqgvdfyain tdsqallqsa aenplqigel ltrglgtggn
      121 pllgeqaaee srdaianalk gsdlvfitag mgggtgsgaa pvvaqiakea gyltvgvvty
      181 pfsfegrkrt vqaleaiekl qknvdtlivi pndrllgiad eqtplqdafl laddvlrqgv
      241 qgisdiitip glvnvdfadv kavmkdsgta mlgvgvsssk nraeeaaeqa tlapligssi
      301 qsatgvvyni tggkditlqe vnrvsqvvts ladpsaniif gavvddryng eihvtiiatg
      361 fsqsfqktll tdpkaakqnd kvaggqerkg iplplkpssp stvpsgssqr rlff
//
LOCUS       XP_016675973              70 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit e1 [Gossypium hirsutum].
ACCESSION   XP_016675973
VERSION     XP_016675973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820484.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..70
                     /product="V-type proton ATPase subunit e1"
                     /calculated_mol_wt=7508
     Region          2..65
                     /region_name="ATP_synt_H"
                     /note="ATP synthase subunit H; pfam05493"
                     /db_xref="CDD:461663"
     CDS             1..70
                     /gene="LOC107895217"
                     /coded_by="XM_016820484.2:222..434"
                     /db_xref="GeneID:107895217"
ORIGIN      
        1 mgflvttlif avigiiaslc triccnrgps anllhltlvi tatvccwmmw aivylaqmkp
       61 livpilsege
//
LOCUS       XP_016675971             305 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP-X isozyme 2 [Gossypium
            hirsutum].
ACCESSION   XP_016675971
VERSION     XP_016675971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="serine/threonine-protein phosphatase PP-X
                     isozyme 2"
                     /calculated_mol_wt=34673
     Region          3..288
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(45,61,64..65,67..68,70,72..73,85,100..104,115..116,
                     119..120,124..125,128..129,137,263,272,282,288)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(51,53,79,83,111..112,116..117,121,161,183..185,194,
                     208..210,236,238,262..264)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(51,53,79,111,161,236)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..305
                     /gene="LOC107895216"
                     /coded_by="XM_016820482.2:187..1104"
                     /db_xref="GeneID:107895216"
ORIGIN      
        1 msdldrqieq lkkceplkes evkalclkam eilveesnvq rvdapvticg dihgqfydmk
       61 elfkvggdcp ktnylflgdf vdrgfysvet fllllalkvr ypdritlirg nhesrqitqv
      121 ygfydeclrk ygsvnvwryc teifdylsls alienkifsv hgglspaist ldqirtidrk
      181 qevphdgamc dllwsdpedi vdgwglsprg agflfggsvv tsfnhtnnid yicrahqlvm
      241 egykwmfnnq ivtvwsapny cyrcgnvaai leldenlnkq frvfdaapqe srgtpakkpa
      301 pdyfl
//
LOCUS       XP_016675966             580 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 1 [Gossypium hirsutum].
ACCESSION   XP_016675966
VERSION     XP_016675966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820477.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..580
                     /product="65-kDa microtubule-associated protein 1"
                     /calculated_mol_wt=64901
     Region          17..531
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..580
                     /gene="LOC107895215"
                     /coded_by="XM_016820477.2:276..2018"
                     /db_xref="GeneID:107895215"
ORIGIN      
        1 mavmdaqnpl lgettcgtll qklqeiwdev gesdeerdkm llqieqecld vykrkveqaa
       61 ksraellvtl sdaklelstl vsalgdksfl gvdtvkasgt ikeqlaaiap aleqlwkqke
      121 ervkefsdvq sqiqkicgei tgsaneqaga pavdesdlsl kklneyqvkl qelqkeksdr
      181 lhkvlefvgt vhdlcavlgm dffstitevh pslddktcvq sksisndtll rlaetvsalh
      241 edkkqrlhkl qelatkltdl wnlmdtpeee rrlfdhvtcn isasvdevtv pgalaldlie
      301 qaeveverld qlkssrmkel afkrqvelee ifahahidid peaarekima lidsgnvepa
      361 elladmdnqi akakeealsr keildrvekw msaceeeswl ddynrddnry nasrgahlnl
      421 kraekarilv nkipgmvdtl vaktraweed rgisfkydgv pllamldeya mlrqereeek
      481 rrlrdqkkfg eqqnteqepi fgsrstparp astkkvvgpr tngtpsrrls lsasqngsrs
      541 aakegkrdsm rlaapanfva itkedaaphv sgtdrspasp
//
LOCUS       XP_016675967             580 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 1 [Gossypium hirsutum].
ACCESSION   XP_016675967
VERSION     XP_016675967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..580
                     /product="65-kDa microtubule-associated protein 1"
                     /calculated_mol_wt=64901
     Region          17..531
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..580
                     /gene="LOC107895215"
                     /coded_by="XM_016820478.2:520..2262"
                     /db_xref="GeneID:107895215"
ORIGIN      
        1 mavmdaqnpl lgettcgtll qklqeiwdev gesdeerdkm llqieqecld vykrkveqaa
       61 ksraellvtl sdaklelstl vsalgdksfl gvdtvkasgt ikeqlaaiap aleqlwkqke
      121 ervkefsdvq sqiqkicgei tgsaneqaga pavdesdlsl kklneyqvkl qelqkeksdr
      181 lhkvlefvgt vhdlcavlgm dffstitevh pslddktcvq sksisndtll rlaetvsalh
      241 edkkqrlhkl qelatkltdl wnlmdtpeee rrlfdhvtcn isasvdevtv pgalaldlie
      301 qaeveverld qlkssrmkel afkrqvelee ifahahidid peaarekima lidsgnvepa
      361 elladmdnqi akakeealsr keildrvekw msaceeeswl ddynrddnry nasrgahlnl
      421 kraekarilv nkipgmvdtl vaktraweed rgisfkydgv pllamldeya mlrqereeek
      481 rrlrdqkkfg eqqnteqepi fgsrstparp astkkvvgpr tngtpsrrls lsasqngsrs
      541 aakegkrdsm rlaapanfva itkedaaphv sgtdrspasp
//
LOCUS       XP_016675968             580 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 1 [Gossypium hirsutum].
ACCESSION   XP_016675968
VERSION     XP_016675968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..580
                     /product="65-kDa microtubule-associated protein 1"
                     /calculated_mol_wt=64901
     Region          17..531
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..580
                     /gene="LOC107895215"
                     /coded_by="XM_016820479.2:242..1984"
                     /db_xref="GeneID:107895215"
ORIGIN      
        1 mavmdaqnpl lgettcgtll qklqeiwdev gesdeerdkm llqieqecld vykrkveqaa
       61 ksraellvtl sdaklelstl vsalgdksfl gvdtvkasgt ikeqlaaiap aleqlwkqke
      121 ervkefsdvq sqiqkicgei tgsaneqaga pavdesdlsl kklneyqvkl qelqkeksdr
      181 lhkvlefvgt vhdlcavlgm dffstitevh pslddktcvq sksisndtll rlaetvsalh
      241 edkkqrlhkl qelatkltdl wnlmdtpeee rrlfdhvtcn isasvdevtv pgalaldlie
      301 qaeveverld qlkssrmkel afkrqvelee ifahahidid peaarekima lidsgnvepa
      361 elladmdnqi akakeealsr keildrvekw msaceeeswl ddynrddnry nasrgahlnl
      421 kraekarilv nkipgmvdtl vaktraweed rgisfkydgv pllamldeya mlrqereeek
      481 rrlrdqkkfg eqqnteqepi fgsrstparp astkkvvgpr tngtpsrrls lsasqngsrs
      541 aakegkrdsm rlaapanfva itkedaaphv sgtdrspasp
//
LOCUS       XP_016675146             506 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: putative BPI/LBP family protein At1g04970
            [Gossypium hirsutum].
ACCESSION   XP_016675146
VERSION     XP_016675146.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819657.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675146.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="LOW QUALITY PROTEIN: putative BPI/LBP family
                     protein At1g04970"
                     /calculated_mol_wt=55776
     Region          36..258
                     /region_name="BPI"
                     /note="BPI/LBP/CETP domain; Bactericidal
                     permeability-increasing protein (BPI) /
                     Lipopolysaccharide-binding protein (LBP) / Cholesteryl
                     ester transfer protein (CETP) domain; binds to and
                     neutralizes lipopolysaccharides from the outer membrane of
                     Gram-negative...; cl00188"
                     /db_xref="CDD:412206"
     Site            36..41
                     /site_type="other"
                     /note="BPI dimerizatation interface [polypeptide binding]"
                     /db_xref="CDD:238164"
     Site            order(40,45,48,52,55,106,151,153,162,208,212,216,250)
                     /site_type="active"
                     /note="apolar binding pocket [active]"
                     /db_xref="CDD:238164"
     Region          286..481
                     /region_name="BPI"
                     /note="BPI/LBP/CETP domain; Bactericidal
                     permeability-increasing protein (BPI) /
                     Lipopolysaccharide-binding protein (LBP) / Cholesteryl
                     ester transfer protein (CETP) domain; binds to and
                     neutralizes lipopolysaccharides from the outer membrane of
                     Gram-negative...; cl00188"
                     /db_xref="CDD:412206"
     Site            286..292
                     /site_type="other"
                     /note="BPI dimerizatation interface [polypeptide binding]"
                     /db_xref="CDD:238164"
     Site            order(291,296,299,303,306,361,393,395,404,440,444,448,474)
                     /site_type="active"
                     /note="apolar binding pocket [active]"
                     /db_xref="CDD:238164"
     CDS             1..506
                     /gene="LOC107894377"
                     /coded_by="XM_016819657.2:245..1765"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107894377"
ORIGIN      
        1 meissksmen airfiffsfl lipantqles nqkgyisavi stkgldfakd lliekavssi
       61 iplqlsdiek sakipvvgkv rmglsdiviy svxfsfssia tgdsgivlva sgatanlnmk
      121 wkysyktwiv tisdqgtatv evlgmvvwlk aavineegtl klllseyech vkdisinvdg
      181 gaswlyqgii dafrgkimse vedaiikkik egiikldsll qslpkqlqvn svvalnvtfm
      241 ddplltnssv eleinglfng adeisvsnyy skraqnflsc nglakmveis lhekvfqsaa
      301 svyfhadhmh wtlnkipesl tntagwryii pqlyeqypnd dmklhvtvts ppviriadhd
      361 vdttiyadlt fevldssevv siacislvis ascsaeihrn nltggikltn ftsslawsni
      421 gnlnmhllqa amstvlenff mpdlnlhlrn gfplplphgf tlqnaeivql nskvmvrsdl
      481 sytedmisrp etlflslfsw tpyksg
//
LOCUS       XP_016675921             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675921
VERSION     XP_016675921.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820432.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12057
     CDS             1..107
                     /gene="LOC107895173"
                     /coded_by="XM_016820432.2:469..792"
                     /db_xref="GeneID:107895173"
ORIGIN      
        1 mifrishpiv refgefeggr evvgqnrgfv slgtldflqq lqlegcylll kesyfvtgpl
       61 irtvgglnff hifiivivll ilansglsrt fqmqmrgsnr rwlsccs
//
LOCUS       XP_016675917             349 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At4g26790 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675917
VERSION     XP_016675917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820428.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..349
                     /product="GDSL esterase/lipase At4g26790 isoform X1"
                     /calculated_mol_wt=39209
     Region          4..348
                     /region_name="Lipase_GDSL_3"
                     /note="GDSL-like Lipase/Acylhydrolase family; cl46856"
                     /db_xref="CDD:481196"
     CDS             1..349
                     /gene="LOC107895171"
                     /coded_by="XM_016820428.2:442..1491"
                     /db_xref="GeneID:107895171"
ORIGIN      
        1 macklvtlff fvnllmqipk vratvpaiiv fgdstvdpgn nnqvstvlks nfepygrdyy
       61 ggqptgrfsn griatdfise alrikpaipa yldpkydied fatgvsfasa gtgydnatsd
      121 vlsvipfwke leyykeyqnk lrkhlgkdea nqrfseslhl isigtndfle nyyilptrss
      181 eysvdeyqsf ligiasnfir elyklgarkv vigglppmgc lplerttnmf fgsdcineyn
      241 dvakdfnkkl qgavtelkqe lggihlvmss pydklmemir npshfgfeda etaccgtgff
      301 emsylcdnmn pftcsdanky vfwdafhpte ktnailadyv vkttlaefr
//
LOCUS       XP_040941230             294 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At4g26790 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941230
VERSION     XP_040941230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085296.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..294
                     /product="GDSL esterase/lipase At4g26790 isoform X2"
                     /calculated_mol_wt=32973
     Region          4..285
                     /region_name="Lipase_GDSL_3"
                     /note="GDSL-like Lipase/Acylhydrolase family; cl46856"
                     /db_xref="CDD:481196"
     CDS             1..294
                     /gene="LOC107895171"
                     /coded_by="XM_041085296.1:506..1390"
                     /db_xref="GeneID:107895171"
ORIGIN      
        1 macklvtlff fvnllmqipk vratvpaiiv fgdstvdpgn nnqvstvlks nfepygrdyy
       61 ggqptgrfsn griatdfise alrikpaipa yldpkydied fatgvsfasa gtgydnatsd
      121 vlsvipfwke leyykeyqnk lrkhlgkdea nqrfseslhl isigtndfle nyyilptrss
      181 eysvdeyqsf ligiasnfir elyklgarkv vigglppmgc lplerttnmf fgsdcineyn
      241 dvakdfnkkl qgavtelkqe lggihlvmss pydklmemir npshfdvays tamr
//
LOCUS       XP_040941231             294 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At4g26790 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941231
VERSION     XP_040941231.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085297.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..294
                     /product="GDSL esterase/lipase At4g26790 isoform X3"
                     /calculated_mol_wt=33000
     Region          4..285
                     /region_name="Lipase_GDSL_3"
                     /note="GDSL-like Lipase/Acylhydrolase family; cl46856"
                     /db_xref="CDD:481196"
     CDS             1..294
                     /gene="LOC107895171"
                     /coded_by="XM_041085297.1:508..1392"
                     /db_xref="GeneID:107895171"
ORIGIN      
        1 macklvtlff fvnllmqipk vratvpaiiv fgdstvdpgn nnqvstvlks nfepygrdyy
       61 ggqptgrfsn griatdfise alrikpaipa yldpkydied fatgvsfasa gtgydnatsd
      121 vlsvipfwke leyykeyqnk lrkhlgkdea nqrfseslhl isigtndfle nyyilptrss
      181 eysvdeyqsf ligiasnfir elyklgarkv vigglppmgc lplerttnmf fgsdcineyn
      241 dvakdfnkkl qgavtelkqe lggihlvmss pydklmemir npshfvqtll tlrp
//
LOCUS       XP_016675918             100 aa            linear   PLN 06-AUG-2024
DEFINITION  upstream activation factor subunit UAF30 [Gossypium hirsutum].
ACCESSION   XP_016675918
VERSION     XP_016675918.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820429.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..100
                     /product="upstream activation factor subunit UAF30"
                     /calculated_mol_wt=11315
     Region          25..95
                     /region_name="SWIB"
                     /note="SWIB/MDM2 domain; pfam02201"
                     /db_xref="CDD:460488"
     CDS             1..100
                     /gene="LOC107895172"
                     /coded_by="XM_016820429.2:287..589"
                     /db_xref="GeneID:107895172"
ORIGIN      
        1 mlpqrlkkti tdnpkklanl idlanlpspv refvgqsqis rlgcffrvws yikennlqdp
       61 nnknlvncde klrsillgkp qvelaelpal iklhfpkvpk
//
LOCUS       XP_016675919             100 aa            linear   PLN 06-AUG-2024
DEFINITION  upstream activation factor subunit UAF30 [Gossypium hirsutum].
ACCESSION   XP_016675919
VERSION     XP_016675919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820430.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..100
                     /product="upstream activation factor subunit UAF30"
                     /calculated_mol_wt=11315
     Region          25..95
                     /region_name="SWIB"
                     /note="SWIB/MDM2 domain; pfam02201"
                     /db_xref="CDD:460488"
     CDS             1..100
                     /gene="LOC107895172"
                     /coded_by="XM_016820430.2:248..550"
                     /db_xref="GeneID:107895172"
ORIGIN      
        1 mlpqrlkkti tdnpkklanl idlanlpspv refvgqsqis rlgcffrvws yikennlqdp
       61 nnknlvncde klrsillgkp qvelaelpal iklhfpkvpk
//
LOCUS       XP_016675138             944 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016675138
VERSION     XP_016675138.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819649.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675138.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..944
                     /product="pentatricopeptide repeat-containing protein
                     At3g24000, mitochondrial"
                     /calculated_mol_wt=104864
     Region          70..96
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          100..145
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          102..131
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          133..162
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          142..942
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          171..232
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          234..263
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          269..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          335..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          370..399
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          438..465
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          471..500
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          510..535
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          539..566
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          572..601
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          607..635
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          640..667
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          673..703
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          709..736
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..944
                     /gene="LOC107894367"
                     /coded_by="XM_016819649.2:138..2972"
                     /db_xref="GeneID:107894367"
ORIGIN      
        1 mliqslvfrc lstrknhlvi efprrllsas fqfvssfsah vateeinpsl kvplfkektk
       61 legtkrlkly skilhdcask gslssakavh gkiikkgfdp dlhlwnslvn ayakrgvfgy
      121 ackvldrmpe rdvvswtalf sglvnegygy dvldlycsmk kdgvlpnghc lvtalkacsl
      181 sldlffgtll hgegvkvgvl ldifvgsslv dlyakcgqme laervflfmd kknvvswnal
      241 lngyalkgda gkilnlfqgm teselrcskf tlsnvlksct ylvnltwgli ahslviktgc
      301 ehdefvgccl ldlyskcgla edtlkvfkri qepnivawsa midcldeqgq iqeaaelfsl
      361 mrckgvspnq htfasiagva anlgdrlyce gvhacilkhg feseiilsna liamymkirs
      421 vqngwqvfke msfwnsaswn sllsgshngk tcdrgpsifh kmlaegfkpd ictftsilrs
      481 csnllnikfg hqvhahiikn glkdnnlvgt slidlyakng fladaellft qlierdlfsw
      541 taliagyaqs dcsekaikcf nhmqrqgvtp nnftlatcls scsnmgmlen gqllhsmaik
      601 agnsgdvfvs ssivdmyanc gcieeaeaaf qgmvstdtvs wnmmlfgylq hrqglkvlet
      661 frtmldkgle pdevtfiavl sacsymgfvi egkeyfdslt nvfgivptik hcacmidilg
      721 ragkfnevks fikdmkvtsn pliwetvlga crmhgndklg esaaeklfel npgiashyil
      781 lanifaakgr wedvrrvral mthcgvkkep gcswvmvngq vhifrstdgc hpkhgeiyik
      841 lkelveksil agyvpktdhi lndvgddekl eqlfhhnerl alafalisin pvktirifkn
      901 lhicedchdf mklvsgvikq eivvrdancf hhfksgicsc qdyc
//
LOCUS       XP_040941232             944 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941232
VERSION     XP_040941232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085298.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..944
                     /product="pentatricopeptide repeat-containing protein
                     At3g24000, mitochondrial"
                     /calculated_mol_wt=104864
     Region          70..96
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          100..145
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          102..131
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          133..162
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          142..942
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          171..232
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          234..263
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          269..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          335..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          370..399
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          438..465
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          471..500
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          510..535
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          539..566
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          572..601
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          607..635
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          640..667
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          673..703
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          709..736
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..944
                     /gene="LOC107894367"
                     /coded_by="XM_041085298.1:89..2923"
                     /db_xref="GeneID:107894367"
ORIGIN      
        1 mliqslvfrc lstrknhlvi efprrllsas fqfvssfsah vateeinpsl kvplfkektk
       61 legtkrlkly skilhdcask gslssakavh gkiikkgfdp dlhlwnslvn ayakrgvfgy
      121 ackvldrmpe rdvvswtalf sglvnegygy dvldlycsmk kdgvlpnghc lvtalkacsl
      181 sldlffgtll hgegvkvgvl ldifvgsslv dlyakcgqme laervflfmd kknvvswnal
      241 lngyalkgda gkilnlfqgm teselrcskf tlsnvlksct ylvnltwgli ahslviktgc
      301 ehdefvgccl ldlyskcgla edtlkvfkri qepnivawsa midcldeqgq iqeaaelfsl
      361 mrckgvspnq htfasiagva anlgdrlyce gvhacilkhg feseiilsna liamymkirs
      421 vqngwqvfke msfwnsaswn sllsgshngk tcdrgpsifh kmlaegfkpd ictftsilrs
      481 csnllnikfg hqvhahiikn glkdnnlvgt slidlyakng fladaellft qlierdlfsw
      541 taliagyaqs dcsekaikcf nhmqrqgvtp nnftlatcls scsnmgmlen gqllhsmaik
      601 agnsgdvfvs ssivdmyanc gcieeaeaaf qgmvstdtvs wnmmlfgylq hrqglkvlet
      661 frtmldkgle pdevtfiavl sacsymgfvi egkeyfdslt nvfgivptik hcacmidilg
      721 ragkfnevks fikdmkvtsn pliwetvlga crmhgndklg esaaeklfel npgiashyil
      781 lanifaakgr wedvrrvral mthcgvkkep gcswvmvngq vhifrstdgc hpkhgeiyik
      841 lkelveksil agyvpktdhi lndvgddekl eqlfhhnerl alafalisin pvktirifkn
      901 lhicedchdf mklvsgvikq eivvrdancf hhfksgicsc qdyc
//
LOCUS       XP_040941233             944 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941233
VERSION     XP_040941233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085299.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..944
                     /product="pentatricopeptide repeat-containing protein
                     At3g24000, mitochondrial"
                     /calculated_mol_wt=104864
     Region          70..96
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          100..145
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          102..131
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          133..162
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          142..942
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          171..232
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          234..263
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          269..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          335..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          370..399
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          438..465
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          471..500
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          510..535
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          539..566
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          572..601
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          607..635
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          640..667
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          673..703
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          709..736
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..944
                     /gene="LOC107894367"
                     /coded_by="XM_041085299.1:90..2924"
                     /db_xref="GeneID:107894367"
ORIGIN      
        1 mliqslvfrc lstrknhlvi efprrllsas fqfvssfsah vateeinpsl kvplfkektk
       61 legtkrlkly skilhdcask gslssakavh gkiikkgfdp dlhlwnslvn ayakrgvfgy
      121 ackvldrmpe rdvvswtalf sglvnegygy dvldlycsmk kdgvlpnghc lvtalkacsl
      181 sldlffgtll hgegvkvgvl ldifvgsslv dlyakcgqme laervflfmd kknvvswnal
      241 lngyalkgda gkilnlfqgm teselrcskf tlsnvlksct ylvnltwgli ahslviktgc
      301 ehdefvgccl ldlyskcgla edtlkvfkri qepnivawsa midcldeqgq iqeaaelfsl
      361 mrckgvspnq htfasiagva anlgdrlyce gvhacilkhg feseiilsna liamymkirs
      421 vqngwqvfke msfwnsaswn sllsgshngk tcdrgpsifh kmlaegfkpd ictftsilrs
      481 csnllnikfg hqvhahiikn glkdnnlvgt slidlyakng fladaellft qlierdlfsw
      541 taliagyaqs dcsekaikcf nhmqrqgvtp nnftlatcls scsnmgmlen gqllhsmaik
      601 agnsgdvfvs ssivdmyanc gcieeaeaaf qgmvstdtvs wnmmlfgylq hrqglkvlet
      661 frtmldkgle pdevtfiavl sacsymgfvi egkeyfdslt nvfgivptik hcacmidilg
      721 ragkfnevks fikdmkvtsn pliwetvlga crmhgndklg esaaeklfel npgiashyil
      781 lanifaakgr wedvrrvral mthcgvkkep gcswvmvngq vhifrstdgc hpkhgeiyik
      841 lkelveksil agyvpktdhi lndvgddekl eqlfhhnerl alafalisin pvktirifkn
      901 lhicedchdf mklvsgvikq eivvrdancf hhfksgicsc qdyc
//
LOCUS       XP_040941234             112 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prolyl 4-hydroxylase 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941234
VERSION     XP_040941234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085300.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="probable prolyl 4-hydroxylase 7 isoform X1"
                     /calculated_mol_wt=12582
     Region          40..>105
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..112
                     /gene="LOC107896496"
                     /coded_by="XM_041085300.1:2153..2491"
                     /db_xref="GeneID:107896496"
ORIGIN      
        1 meyryflgff llllinftlv laeingsvlk mrggtssvqf dptsvtqlsw rprafiyngf
       61 lsseecdhli flakdkleks mvaddvsgqs iesevrtssg mflekalpyr lv
//
LOCUS       XP_040941235             110 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prolyl 4-hydroxylase 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941235
VERSION     XP_040941235.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085301.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="probable prolyl 4-hydroxylase 7 isoform X2"
                     /calculated_mol_wt=12343
     Region          40..>105
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..110
                     /gene="LOC107896496"
                     /coded_by="XM_041085301.1:1943..2275"
                     /db_xref="GeneID:107896496"
ORIGIN      
        1 meyryflgff llllinftlv laeingsvlk mrggtssvqf dptsvtqlsw rprafiyngf
       61 lsseecdhli flakdkleks mvaddvsgqs iesevrtssg mflekalvyk
//
LOCUS       XP_016704602             442 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-L-galactose phosphorylase 2 [Gossypium hirsutum].
ACCESSION   XP_016704602
VERSION     XP_016704602.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704602.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..442
                     /product="GDP-L-galactose phosphorylase 2"
                     /calculated_mol_wt=49368
     Region          4..400
                     /region_name="PLN03103"
                     /note="GDP-L-galactose-hexose-1-phosphate
                     guanyltransferase; Provisional"
                     /db_xref="CDD:215577"
     CDS             1..442
                     /gene="LOC107919728"
                     /coded_by="XM_016849113.2:962..2290"
                     /db_xref="GeneID:107919728"
ORIGIN      
        1 miqlsikrvp tvvsnyqkde aeetarrsgg cgknclrncc isgaklplya fkkesekdaf
       61 esdnkeppva fldslvlgew edrmqrglfr ydvtacetkv ipgeygfiaq lnegrhlkkr
      121 ptefrvdkvl qpfdgnkfnf tkvgqeevlf qfeasedgev qffpnapidv enhpsvvain
      181 vspieyghvl liprileclp qridresfll alymaaeagn pyfrlgynsl gafatinhlh
      241 fqayylavaf piekaptkki ttlndgviis ellkypvrgv vfeggntlqd lsdtvseaci
      301 clqdnniayn vlisdcgkri fllpqcyaek qalgevsvel ldtqvnpavw eisghmvlkr
      361 rkdydeasde nawrllaevs lsderfdevn alifeaiggg kdatenveep dtkaqsieke
      421 ngitetshha mvagtqqclv lh
//
LOCUS       XP_016704600             366 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g55050 [Gossypium hirsutum].
ACCESSION   XP_016704600
VERSION     XP_016704600.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849111.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704600.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..366
                     /product="GDSL esterase/lipase At5g55050"
                     /calculated_mol_wt=40074
     Region          37..351
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(45,123,179,331,334)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(45,331,334)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(45,123,179)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..366
                     /gene="LOC107919726"
                     /coded_by="XM_016849111.2:61..1161"
                     /db_xref="GeneID:107919726"
ORIGIN      
        1 mksmdsrrvl vgrnimfffl icvlgwsskl seaqmvpalf vfgdsqvdvg nnnhlffsia
       61 kanfphngvd fptkkatgry sngknaadfl aeklglsssp aylslssnth asymngvsfa
      121 sggsgilnts sqvlgqsipl sdqvnnflsv hkvmlqkmgt dglekhfsks lfaivigsnd
      181 ilnyfesede kdtpehlvnl mvnnlkaeik klygfgahki lvsgvgaigc vpaqrakhst
      241 hecneevnmw vvkyneglke vlkglkselp glnyafldly gimqkvirdp sahgfkevra
      301 accglgelra kipclpfssy cpnradhvfw dlyhpteams rivadtvfdg pseycvpmnv
      361 rqliaa
//
LOCUS       XP_016704601             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized membrane protein YuiD [Gossypium hirsutum].
ACCESSION   XP_016704601
VERSION     XP_016704601.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704601.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..168
                     /product="uncharacterized membrane protein YuiD"
                     /calculated_mol_wt=17718
     Region          44..160
                     /region_name="DUF212"
                     /note="Divergent PAP2 family; pfam02681"
                     /db_xref="CDD:426924"
     CDS             1..168
                     /gene="LOC107919727"
                     /coded_by="XM_016849112.2:86..592"
                     /db_xref="GeneID:107919727"
ORIGIN      
        1 meevmtvgda sarfrsisst ssiipsnvpl lsaffafala qflklfttwy kekrwdsrrl
       61 vasggmpssh satvtalaaa iglqeglggs afaialvlac vvmydasgvr lhagrqaell
      121 nqivcelppe hpvssvrplr dslghtplqv lagsilgciv aflmrtss
//
LOCUS       XP_040941236             522 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB120 [Gossypium hirsutum].
ACCESSION   XP_040941236
VERSION     XP_040941236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085302.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..522
                     /product="transcription factor MYB120"
                     /calculated_mol_wt=57909
     Region          22..>130
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..522
                     /gene="LOC121212482"
                     /coded_by="XM_041085302.1:467..2035"
                     /db_xref="GeneID:121212482"
ORIGIN      
        1 mmgnnnnnhh qvsmqkeegv mlkkgpwtaa edavlaeyvr thgegnwnav qrntglarcg
       61 kscrlrwanh lrpnlkkgaf speeeriive lhaimgnkwa rmaarlpgrt dneiknywnt
      121 rvkrrqrqgl plyppeiqsl ysqtqpvltp sstssfsfqh stttltsssp stpprllayd
      181 phsaatpppv qspspastpp plpspshvsp lqsphkpsfs sipladsfts ntpsssldfy
      241 fprplpslqq plrnkrprhd enntnngdss fmlpfsslmk tdpfnphtvt nnslnpqhys
      301 nsycldqttf dmasssrfpq phfdpgqfis tprfgynqlk telpsnqift qvgnsqvrld
      361 pkgnnnyssh nqiqnsnhhs sslnisgngl iedmlqevqt lnekneimas qsclvrssss
      421 seglasglea keeskeqimn takhvdysnv npssmamaip ewyinngets igqsstvtyd
      481 nlalefelhd qiasllpidt apdhhgrsss sytwdhsfpg ic
//
LOCUS       XP_040941237             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941237
VERSION     XP_040941237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085303.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..185
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20933
     Region          27..185
                     /region_name="Senescence_reg"
                     /note="Senescence regulator; pfam04520"
                     /db_xref="CDD:461341"
     CDS             1..185
                     /gene="LOC121212484"
                     /coded_by="XM_041085303.1:423..980"
                     /db_xref="GeneID:121212484"
ORIGIN      
        1 mlkwsrwcfc rnlgmedrys fpslrdgdfe eedvwavlke skdstyrvgh ssessipdrg
       61 hvpsaarmip rtlsainnss nigsccssys heandvkqqs apenipdwsk vstkmrngsw
      121 hddddddddd deynsmlpph eilarrlarn qissfsvfeg vgrklkgrdl kkvrnavltk
      181 tgfle
//
LOCUS       XP_040941238             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941238
VERSION     XP_040941238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085304.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..171
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19151
     Region          13..171
                     /region_name="Senescence_reg"
                     /note="Senescence regulator; pfam04520"
                     /db_xref="CDD:461341"
     CDS             1..171
                     /gene="LOC121212484"
                     /coded_by="XM_041085304.1:434..949"
                     /db_xref="GeneID:121212484"
ORIGIN      
        1 medrysfpsl rdgdfeeedv wavlkeskds tyrvghsses sipdrghvps aarmiprtls
       61 ainnssnigs ccssyshean dvkqqsapen ipdwskvstk mrngswhddd dddddddeyn
      121 smlppheila rrlarnqiss fsvfegvgrk lkgrdlkkvr navltktgfl e
//
LOCUS       XP_040941239             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941239
VERSION     XP_040941239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085305.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..185
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20933
     Region          27..185
                     /region_name="Senescence_reg"
                     /note="Senescence regulator; pfam04520"
                     /db_xref="CDD:461341"
     CDS             1..185
                     /gene="LOC121212484"
                     /coded_by="XM_041085305.1:420..977"
                     /db_xref="GeneID:121212484"
ORIGIN      
        1 mlkwsrwcfc rnlgmedrys fpslrdgdfe eedvwavlke skdstyrvgh ssessipdrg
       61 hvpsaarmip rtlsainnss nigsccssys heandvkqqs apenipdwsk vstkmrngsw
      121 hddddddddd deynsmlpph eilarrlarn qissfsvfeg vgrklkgrdl kkvrnavltk
      181 tgfle
//
LOCUS       XP_040941240             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941240
VERSION     XP_040941240.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085306.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..171
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19151
     Region          13..171
                     /region_name="Senescence_reg"
                     /note="Senescence regulator; pfam04520"
                     /db_xref="CDD:461341"
     CDS             1..171
                     /gene="LOC121212484"
                     /coded_by="XM_041085306.1:419..934"
                     /db_xref="GeneID:121212484"
ORIGIN      
        1 medrysfpsl rdgdfeeedv wavlkeskds tyrvghsses sipdrghvps aarmiprtls
       61 ainnssnigs ccssyshean dvkqqsapen ipdwskvstk mrngswhddd dddddddeyn
      121 smlppheila rrlarnqiss fsvfegvgrk lkgrdlkkvr navltktgfl e
//
LOCUS       XP_016705026             536 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 33 [Gossypium hirsutum].
ACCESSION   XP_016705026
VERSION     XP_016705026.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849537.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016705026.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="calcium-dependent protein kinase 33"
                     /calculated_mol_wt=60228
     Region          88..346
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(95..99,103,116,118,151,167..170,174,176,212..213,
                     215,217..218,220,233..234,237,251..255,257)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(95..98,103,116,118,151,167..170,174,217..218,220,
                     233..234)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(99,174,176,212..213,215,217,237,251..255,257)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(233..241,251..255)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          383..528
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..536
                     /gene="LOC107920041"
                     /coded_by="XM_016849537.2:472..2082"
                     /db_xref="GeneID:107920041"
ORIGIN      
        1 mggcltknkd pmpqhngyrs gatttaavhq qryqdpvrpa piqpqvyhip qkpgtqtpwk
       61 pavpapspkp apnidtilgk pfedirmhyt igkelgkgqf gvtyhctens tgkqyackti
      121 skrklvrknd kedmkreiqi mqhlsgqpni vefkgayedk qsvhlvmelc aggelfdrii
      181 akghyseraa asicraivnv vhachfmgvm hrdlkpenfl lsskgenall katdfglsvf
      241 ieegkvyqdi vgsafyvape vllrkygkei diwsagvily illsgvppfw aetekgifda
      301 ilegeidfes qpwpsisdsa kdlvcrmltq dpkkritstq vlehpwireg gnasdkplds
      361 avlsrmkqfr rmnklkqlal kviaenlste eiqglkqmfa nidtdnsgti tydelktgla
      421 rlgskltete vqqlmeaadv dgngtidyie fitatmhrhr lerdedlyka fqhfdkdnsg
      481 hitrdeleaa mkeygmgddd tikeiisevd tdndgkinye efrdmmrsgt qhgqlf
//
LOCUS       XP_040941241             112 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translation factor SUI1 homolog [Gossypium hirsutum].
ACCESSION   XP_040941241
VERSION     XP_040941241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085307.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="protein translation factor SUI1 homolog"
                     /calculated_mol_wt=12561
     Region          6..112
                     /region_name="eIF1_SUI1_like"
                     /note="Eukaryotic initiation factor 1 and related
                     proteins; cl00229"
                     /db_xref="CDD:469673"
     Site            order(37,40..41,43,60,63..65,67..69,71,85,88)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            87..88
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..112
                     /gene="LOC121212485"
                     /coded_by="XM_041085307.1:445..783"
                     /db_xref="GeneID:121212485"
ORIGIN      
        1 mvelgiqipt tfdpfaeaee fgrtgtkdyv hiriqqrngr kslttveglk qelssdkilk
       61 slkkefccng nvvhdkelgk iiqlqgdqrk kvahflvnag ivkkeqikih gf
//
LOCUS       XP_040941242             112 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translation factor SUI1 homolog [Gossypium hirsutum].
ACCESSION   XP_040941242
VERSION     XP_040941242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085308.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="protein translation factor SUI1 homolog"
                     /calculated_mol_wt=12561
     Region          6..112
                     /region_name="eIF1_SUI1_like"
                     /note="Eukaryotic initiation factor 1 and related
                     proteins; cl00229"
                     /db_xref="CDD:469673"
     Site            order(37,40..41,43,60,63..65,67..69,71,85,88)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            87..88
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..112
                     /gene="LOC121212485"
                     /coded_by="XM_041085308.1:240..578"
                     /db_xref="GeneID:121212485"
ORIGIN      
        1 mvelgiqipt tfdpfaeaee fgrtgtkdyv hiriqqrngr kslttveglk qelssdkilk
       61 slkkefccng nvvhdkelgk iiqlqgdqrk kvahflvnag ivkkeqikih gf
//
LOCUS       XP_040941243             239 aa            linear   PLN 06-AUG-2024
DEFINITION  NEP1-interacting protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941243
VERSION     XP_040941243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085309.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..239
                     /product="NEP1-interacting protein 1"
                     /calculated_mol_wt=25961
     Region          179..222
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(180,183,199,201,204,207,218,221)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438124"
     CDS             1..239
                     /gene="LOC121212486"
                     /coded_by="XM_041085309.1:179..898"
                     /db_xref="GeneID:121212486"
ORIGIN      
        1 mlkdcfpgla frcgealafw ifvlmtdlri gfliklfkrs lfaaficifa lggaivgtvv
       61 gamkgqttet gffrgagiga vagaitavql lesladgesl skvallvslv ngkvfiewvs
      121 pavlkayqwq mnslestyre isdiydvngg kglsrsciqk lpmqefhsie riksreescc
      181 siciqglkdg emarnlprcg hifhlkcide wlsrqgtcpm credvldddd ngggggeev
//
LOCUS       XP_040941244             192 aa            linear   PLN 06-AUG-2024
DEFINITION  reactive Intermediate Deaminase A, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941244
VERSION     XP_040941244.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085310.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..192
                     /product="reactive Intermediate Deaminase A, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=20228
     Region          67..190
                     /region_name="TIGR00004"
                     /note="reactive intermediate/imine deaminase"
                     /db_xref="CDD:129116"
     Site            order(82..83,86,88,91,93,95..96,136,138..139,141,143,154,
                     157,166..173,183,185,187)
                     /site_type="other"
                     /note="homotrimer interaction site [polypeptide binding]"
                     /db_xref="CDD:100004"
     Site            order(82,150,154,168,183)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
     CDS             1..192
                     /gene="LOC121212488"
                     /coded_by="XM_041085310.1:106..684"
                     /db_xref="GeneID:121212488"
ORIGIN      
        1 mawcslrsih vptvdvgllr trsplaavgg vvagssflrs ssrngspfac lslstspgnk
       61 rktirikeav atnkapaalg pysqaikann llfvsgvlgl ipetgkfisd svedqteqvl
      121 knmgeilkas gadyssvvkt timladlkdf kkvneiyaky fpspaparst yqvaalplda
      181 kieieciaal ka
//
LOCUS       XP_040941245             185 aa            linear   PLN 06-AUG-2024
DEFINITION  reactive Intermediate Deaminase A, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941245
VERSION     XP_040941245.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085311.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..185
                     /product="reactive Intermediate Deaminase A, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=19330
     Region          60..183
                     /region_name="TIGR00004"
                     /note="reactive intermediate/imine deaminase"
                     /db_xref="CDD:129116"
     Site            order(75..76,79,81,84,86,88..89,129,131..132,134,136,147,
                     150,159..166,176,178,180)
                     /site_type="other"
                     /note="homotrimer interaction site [polypeptide binding]"
                     /db_xref="CDD:100004"
     Site            order(75,143,147,161,176)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
     CDS             1..185
                     /gene="LOC121212488"
                     /coded_by="XM_041085311.1:220..777"
                     /db_xref="GeneID:121212488"
ORIGIN      
        1 mawcslrsih vptvdvgllr trsplaavgg vvagssflrs ssrngspfac lslstspgik
       61 eavatnkapa algpysqaik annllfvsgv lglipetgkf isdsvedqte qvlknmgeil
      121 kasgadyssv vkttimladl kdfkkvneiy akyfpspapa rstyqvaalp ldakieieci
      181 aalka
//
LOCUS       XP_040941246             684 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941246
VERSION     XP_040941246.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085312.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..684
                     /product="uncharacterized protein"
                     /calculated_mol_wt=77319
     Region          <217..>394
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..684
                     /gene="LOC121212489"
                     /coded_by="XM_041085312.1:306..2360"
                     /db_xref="GeneID:121212489"
ORIGIN      
        1 mslpttfsgr npadadlkpt rkrttrntrw krvgaavvgr rsrpetpllk wkmeerervr
       61 dkgggvekel eeeedggrar rrkgtstvsa rklagglwrl qlpetvtlgg gerrrdqlgl
      121 kagnrfigvp flyhhkdkfy gsepknplqs pssvspakns fprkvgpliq fsnsamegat
      181 kwdpvcfrtt devqqiysrm kgidqqvsav sivsaleael eqarvrikel etecwsskkk
      241 lehflrkvse eraawrsreh ekirafvndv kadlnrekkn rqrleivssk lvkelaaasl
      301 sakqymqdye kerkdrelie evcdelakei gedkseveal nrdsmklrde vdgerkmlqm
      361 aevwreervq mklidakval eerysqmnkl vadldtflrs rtgtldvkdm reaeslrqaa
      421 asvnvqeike fayepanpdd ifavledval aeaneretep svacspanra skvhmasaem
      481 nmmkkdgnlr hsnlygdqkd eieedesgwe tishiegqgp syspkgsaas adkfhrhsnl
      541 sgsgtewegd tpvteisevc slparqlkkv spivrlwrsv pkheehfkvi svegtngrls
      601 dgrkcngsir spdkgsdngg fspldlvghw sspdpghphi mkgmkgciew prgvqkksfk
      661 akllearmes qkvqlrhvik qkik
//
LOCUS       XP_016705077             400 aa            linear   PLN 06-AUG-2024
DEFINITION  embryogenesis-associated protein EMB8 [Gossypium hirsutum].
ACCESSION   XP_016705077
VERSION     XP_016705077.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849588.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016705077.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..400
                     /product="embryogenesis-associated protein EMB8"
                     /calculated_mol_wt=44202
     Region          30..398
                     /region_name="PLN02511"
                     /note="hydrolase"
                     /db_xref="CDD:215282"
     CDS             1..400
                     /gene="LOC107920071"
                     /coded_by="XM_016849588.2:245..1447"
                     /db_xref="GeneID:107920071"
ORIGIN      
        1 matsplsvts kppsvtrlrh qrppltpvrv saaavttttg mpdhhhpsle itgggadrfl
       61 pafntlhlhy kpfpiigwnr hletifaaff rtvpevkyrr eclrtqdngt ialdwvygdh
      121 rslpsdspil illpgltggs qdsyvkhmla kakskgwrvv vfnsrgcans pvttpqlqta
      181 sftadtchvv dhvssrypia siyavgwslg gnilvnylgr ehhrcslsga vslcnpfnlv
      241 iadenlrkgf nniydralrg glsrtfekha slfeemhdey nvqeglnprt vreydeaitr
      301 vslgyksvde yysnscschv vqhvripllc iqaandpiap ieatpysdik dnpncmlivt
      361 pqgghlgwva gddapfgapw tdnvviefle hlqknaskle
//
LOCUS       XP_016674040             438 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674040
VERSION     XP_016674040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818551.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..438
                     /product="uncharacterized protein"
                     /calculated_mol_wt=47645
     Region          <182..283
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..438
                     /gene="LOC107893523"
                     /coded_by="XM_016818551.2:1..1317"
                     /db_xref="GeneID:107893523"
ORIGIN      
        1 mlvisallfc lparnrnkic rkgdlfaant tmnqdneqdn npdalddfll krkrgrprkh
       61 pkhdlnqgen aqmpwnqnln haenahvppg fgavngnrph qvnpdandvm vgqavsgvie
      121 aafdagyllt vrvgnsdttl rgvvfrpghy vpisaendva pnlqmirrne iplprerngt
      181 ahplngpalt nqvprarasn lgaiknknvq paatqfnsll srgtvvpvvl qpaslsngkv
      241 ssqqlsqpph lvskgkqvsg tanatneekp vnqmatvgnp ifptqpqprs snhtvpkgiq
      301 setvsysqlp aeglqdkdak lmtgmpfekl lsevmkrvqv plqppevqgg nlsvkelgnk
      361 leddqalsie plqavqsths ssmlkplenf rtgkmtellq avqenmrenq asrneqpais
      421 segtmlrdka thdsnkqs
//
LOCUS       XP_016674042             419 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein RBP45C isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674042
VERSION     XP_016674042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818553.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="polyadenylate-binding protein RBP45C isoform X1"
                     /calculated_mol_wt=46126
     Region          83..161
                     /region_name="RRM1_SECp43_like"
                     /note="RNA recognition motif 1 (RRM1) found in tRNA
                     selenocysteine-associated protein 1 (SECp43) and similar
                     proteins; cd12344"
                     /db_xref="CDD:409780"
     Region          174..253
                     /region_name="RRM2_SECp43_like"
                     /note="RNA recognition motif 2 (RRM2) found in tRNA
                     selenocysteine-associated protein 1 (SECp43) and similar
                     proteins; cd12345"
                     /db_xref="CDD:409781"
     Region          282..357
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..419
                     /gene="LOC107893524"
                     /coded_by="XM_016818553.2:175..1434"
                     /db_xref="GeneID:107893524"
ORIGIN      
        1 mmqqpppggv atppsmaadq sqthhyqqqq qsqtwmmmsq qqqqvgqpvp ppsgwntqpi
       61 pppsqmqqyp agsaaagsge irslwigdlq pwmdenylmn ifaqtgevvs akvirnkqta
      121 lpegygfief vsqeaaervl qsyngvpmpn seqnfrlnwa algygdkrqe egtdytifvg
      181 dlagdvsdyl lqetfkavyp svkgakvvtd rttgrskgyg fvrfgneteq iramtemngi
      241 ycstramrig paankkpftg qqyqkdtyqn tqgnpgendp nnttayvqif vggldpsvse
      301 dqlkqifsql gevvhvkipa nkncgfvqya nrtsaeqals vlngtilggr nvrlswgrsp
      361 sskqaqpdqa qwnggyygya qgyeaygyap ppqdpsmyyg gypgygnyqq pgayqqpqq
//
LOCUS       XP_016674043             415 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein RBP45C isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674043
VERSION     XP_016674043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818554.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..415
                     /product="polyadenylate-binding protein RBP45C isoform X2"
                     /calculated_mol_wt=45665
     Region          83..161
                     /region_name="RRM1_SECp43_like"
                     /note="RNA recognition motif 1 (RRM1) found in tRNA
                     selenocysteine-associated protein 1 (SECp43) and similar
                     proteins; cd12344"
                     /db_xref="CDD:409780"
     Region          174..253
                     /region_name="RRM2_SECp43_like"
                     /note="RNA recognition motif 2 (RRM2) found in tRNA
                     selenocysteine-associated protein 1 (SECp43) and similar
                     proteins; cd12345"
                     /db_xref="CDD:409781"
     Region          282..353
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..415
                     /gene="LOC107893524"
                     /coded_by="XM_016818554.2:175..1422"
                     /db_xref="GeneID:107893524"
ORIGIN      
        1 mmqqpppggv atppsmaadq sqthhyqqqq qsqtwmmmsq qqqqvgqpvp ppsgwntqpi
       61 pppsqmqqyp agsaaagsge irslwigdlq pwmdenylmn ifaqtgevvs akvirnkqta
      121 lpegygfief vsqeaaervl qsyngvpmpn seqnfrlnwa algygdkrqe egtdytifvg
      181 dlagdvsdyl lqetfkavyp svkgakvvtd rttgrskgyg fvrfgneteq iramtemngi
      241 ycstramrig paankkpftg qqyqkdtyqn tqgnpgendp nnttifvggl dpsvsedqlk
      301 qifsqlgevv hvkipanknc gfvqyanrts aeqalsvlng tilggrnvrl swgrspsskq
      361 aqpdqaqwng gyygyaqgye aygyapppqd psmyyggypg ygnyqqpgay qqpqq
//
LOCUS       XP_016674044             498 aa            linear   PLN 06-AUG-2024
DEFINITION  probable folate-biopterin transporter 4 [Gossypium hirsutum].
ACCESSION   XP_016674044
VERSION     XP_016674044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818555.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..498
                     /product="probable folate-biopterin transporter 4"
                     /calculated_mol_wt=54773
     Region          18..487
                     /region_name="MFS_FBT"
                     /note="Folate-biopterin transporter of the Major
                     Facilitator Superfamily of transporters; cd17484"
                     /db_xref="CDD:341037"
     Site            order(30..31,34..35,38,66,125..126,128..130,133,156,
                     159..160,163,305,308..309,312..314,317,345,349,400..401,
                     405,409,433,436..437,440..441,444)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341037"
     CDS             1..498
                     /gene="LOC107893525"
                     /coded_by="XM_016818555.2:125..1621"
                     /db_xref="GeneID:107893525"
ORIGIN      
        1 miqcikqlkt afglaflwlv cliyftqgfr sfvwtavsyq lkdrlklsps vsqfvfsvsf
       61 fpwsikpiyg ilsdcipikg kkripylvis tvmslvpwli lginastrss iwhlmilltl
      121 qnlgsamadv vvdamiaeav rfekasfagd lqslswlsma fggvcgsllg gyaltnleid
      181 iifllfsilp aiqlfscglv eessmggevl sdfsissdsh hlngkandld edgslekksn
      241 vsarkrkkgq kkskktqltg rkaqtpspgk gkslpllwfq slkyatynlc rafkqpmilr
      301 pmawfflahv tvpnlstvmf yyqteflkle asflgtvrvi gwlglmlgtf tynqylkkmk
      361 lrrilalthi glaflnlfdv ilvsrinvaf gvsdktlvlc gsalsdavnq fkfmpflils
      421 gqlcppgieg tlfalfmsin nfgstvgsfv gaglasilni ssgsfdnlll giniqlfctf
      481 ipvvllflip keatgias
//
LOCUS       XP_016674045             437 aa            linear   PLN 06-AUG-2024
DEFINITION  purple acid phosphatase 18 [Gossypium hirsutum].
ACCESSION   XP_016674045
VERSION     XP_016674045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..437
                     /product="purple acid phosphatase 18"
                     /calculated_mol_wt=49349
     Region          26..422
                     /region_name="PLN02533"
                     /note="probable purple acid phosphatase"
                     /db_xref="CDD:215292"
     CDS             1..437
                     /gene="LOC107893526"
                     /coded_by="XM_016818556.2:269..1582"
                     /db_xref="GeneID:107893526"
ORIGIN      
        1 metkrmifvi lisvllslsl pvrtdyvrpq prktlhfpre pkhpslphqv hislagenhm
       61 riswitddns apsiveygtl pgqytfsssg eatsynylfy ssgkihhtvi gplehdtvyf
      121 yrcggqgpef qlktppgqfp vtfavagdlg qtgwtkstld hidqckydvh llpgdlsyad
      181 cmqhlwdnfg elvqplasar pwmvtqgnhe kekipfftda fesynarwkm pfeesestsn
      241 lyysfevagv hvimlgsytd ydelsdqysw lkadlskvdr kktpwlvvlf hvpwynsnha
      301 hqgegdgmmt amepllyaag vdlvfaghvh ayerskrvnk gksdpcgtvh itigdggnre
      361 glaqkyihpt pewsmfreas fghgelkivn sthafwswhr ndddepvrsd qvwiisligs
      421 gclaekayes skilvsp
//
LOCUS       XP_040941247             676 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941247
VERSION     XP_040941247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085313.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..676
                     /product="uncharacterized protein"
                     /calculated_mol_wt=77346
     Region          105..468
                     /region_name="PMD"
                     /note="Plant mobile domain; pfam10536"
                     /db_xref="CDD:463139"
     CDS             1..676
                     /gene="LOC121212491"
                     /coded_by="XM_041085313.1:825..2855"
                     /db_xref="GeneID:121212491"
ORIGIN      
        1 mveptgneie netiieeree lmvsrfangk pclraahflk ptlssihepi pdlfplspss
       61 lhyifcpeqw plkvsftgws npkkawvfwi dilrpvyqpi wekagifeai msstystkry
      121 ynlviglaek wnpgtntfif pwgettisle dvlilggysv vgfpvtfsgd sqelreaqek
      181 lvtehknirg dtwrkiflte wmdyfigsgr dieheaflsw wltrfvfqds vgfickrvfp
      241 iacllargqv valgpavlas iyrdltllke tiadstkyrs tefddcvskv tlcspmklvq
      301 lwawerfpal qpnpnviqef dprsarwnsv kfvkvenvrm vldsagdtfg wrpyakivnn
      361 rqclefyeke ewvsidrnli kelvsfalcl rpselvglgp gciqqylphr vamqfgidqd
      421 vpshvarsnk speiawnnyl rpinggklyi psrffrsdvt vrylewwkmv smlvqqdvik
      481 givrrkrssr krprqipwvk akkgeneasi ppgfhpklia vkpepfidel epeafevskq
      541 kgnvitrpvg hdncflvkaq ghsssmadtg gsvkmefsmt paqtaidikd qseetarvrr
      601 eaiesefecs myskdniskn gessstfevn miastlevrv arlerivsdl mqhrsleeiq
      661 akktakenla ivnlyi
//
LOCUS       XP_016674048             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674048
VERSION     XP_016674048.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818559.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674048.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..193
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20948
     CDS             1..193
                     /gene="LOC107893528"
                     /coded_by="XM_016818559.2:1..582"
                     /db_xref="GeneID:107893528"
ORIGIN      
        1 mgwvsvlspk kegfsfpksq mvdlcisfvt gllvaqlnvs dkdkthpmes kdnnlvlgfv
       61 vlavflisgv kswtgeihgr vvcdvcadss igpedhvleg aevavlcitk sgevvnyqaf
      121 tnskgiytva etmpeserwd aclgrpissf hdhcnhlgdg stgikftynh psghfhairp
      181 fvyrpstapt yci
//
LOCUS       XP_040941248            1120 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase delta catalytic subunit isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941248
VERSION     XP_040941248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085314.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1120
                     /product="DNA polymerase delta catalytic subunit isoform
                     X1"
                     /calculated_mol_wt=126429
     Region          54..1119
                     /region_name="PTZ00166"
                     /note="DNA polymerase delta catalytic subunit;
                     Provisional"
                     /db_xref="CDD:240301"
     CDS             1..1120
                     /gene="LOC107893529"
                     /coded_by="XM_041085314.1:71..3433"
                     /db_xref="GeneID:107893529"
ORIGIN      
        1 mnkggnsrkr ppppsshqps palkhqattp tppppsteed fvdedvffde tlmgeedves
       61 lilrdfeerq alasrlskwa rpplsdayis qsrsivfqql eidyvigesh knllpdsscq
      121 aaiirifgvt geghsvcclv hgfepyfyis cppgmgpddi shfhqtlegr mkemnrnskv
      181 pkfvrrielv qkrsimyyqq qksqpflkiv valptmvatc rgildrgiqi dglgmksfit
      241 yesnvlfalr fmidcnivgg nwieipagky kktaknmsyc qlefdclysd lishapegef
      301 skmapfrils fdiecagrkg hfpepsqdpv iqvanlvtlq gedqpfirnv mtlkscspiv
      361 gvdvmsfdte kevllawref irevdpdiii gynickfdlp ylieraqtlg iaefpilgri
      421 rnsrvrvkdt tfssrqygtr eskevtvegr vqfdllqamq rdyklssysl nsvsahflse
      481 qkedvhhsii sdlqngnaet rrrlavyclk gigegillwa snpslvevyl lsedaylpqr
      541 lldklmyvyn yvemarvtgv pisfllsrgq sikvlsqllr kskqknlvip nvkqagseqg
      601 tfegatvlea kagfyekpia tldfaslyps immaynlcyc tlvtpedvrk lnlppecvnr
      661 tpsgetfvkp elqkgilpei leellaarkr akadlkeakd plekavldgr qlalkvsans
      721 vygftgatvg qlpcleisss vtsygrqmie htkklvedkf tvlggyehna eviygdtdsv
      781 mvqfgvsdve aamnlgreaa ehisgtftkp iklefekvyy pylliskkry aglfwtnpqk
      841 fdkmdtkgie tvrrdncllv knlvteclhk ilidrdipga vqyvkntisd llmnrmdlsl
      901 lvitkgltkt gddyevkaah velaermrkr dpatapnvgd rvpyviikaa kgakayerse
      961 dpiyvlenni pidpqyylen qiskpllrif epilknaske llhgshtrsi sistpsnsgi
     1021 mkfakkqlsc igckalicns drtlcshckg reaelyyktv sqvseleelf grlwtqcqec
     1081 qgslhqdvlc tsrdcpifyr rkkaqkdmve akrqldrwnf
//
LOCUS       XP_040941250            1120 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase delta catalytic subunit isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941250
VERSION     XP_040941250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085316.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1120
                     /product="DNA polymerase delta catalytic subunit isoform
                     X1"
                     /calculated_mol_wt=126429
     Region          54..1119
                     /region_name="PTZ00166"
                     /note="DNA polymerase delta catalytic subunit;
                     Provisional"
                     /db_xref="CDD:240301"
     CDS             1..1120
                     /gene="LOC107893529"
                     /coded_by="XM_041085316.1:72..3434"
                     /db_xref="GeneID:107893529"
ORIGIN      
        1 mnkggnsrkr ppppsshqps palkhqattp tppppsteed fvdedvffde tlmgeedves
       61 lilrdfeerq alasrlskwa rpplsdayis qsrsivfqql eidyvigesh knllpdsscq
      121 aaiirifgvt geghsvcclv hgfepyfyis cppgmgpddi shfhqtlegr mkemnrnskv
      181 pkfvrrielv qkrsimyyqq qksqpflkiv valptmvatc rgildrgiqi dglgmksfit
      241 yesnvlfalr fmidcnivgg nwieipagky kktaknmsyc qlefdclysd lishapegef
      301 skmapfrils fdiecagrkg hfpepsqdpv iqvanlvtlq gedqpfirnv mtlkscspiv
      361 gvdvmsfdte kevllawref irevdpdiii gynickfdlp ylieraqtlg iaefpilgri
      421 rnsrvrvkdt tfssrqygtr eskevtvegr vqfdllqamq rdyklssysl nsvsahflse
      481 qkedvhhsii sdlqngnaet rrrlavyclk gigegillwa snpslvevyl lsedaylpqr
      541 lldklmyvyn yvemarvtgv pisfllsrgq sikvlsqllr kskqknlvip nvkqagseqg
      601 tfegatvlea kagfyekpia tldfaslyps immaynlcyc tlvtpedvrk lnlppecvnr
      661 tpsgetfvkp elqkgilpei leellaarkr akadlkeakd plekavldgr qlalkvsans
      721 vygftgatvg qlpcleisss vtsygrqmie htkklvedkf tvlggyehna eviygdtdsv
      781 mvqfgvsdve aamnlgreaa ehisgtftkp iklefekvyy pylliskkry aglfwtnpqk
      841 fdkmdtkgie tvrrdncllv knlvteclhk ilidrdipga vqyvkntisd llmnrmdlsl
      901 lvitkgltkt gddyevkaah velaermrkr dpatapnvgd rvpyviikaa kgakayerse
      961 dpiyvlenni pidpqyylen qiskpllrif epilknaske llhgshtrsi sistpsnsgi
     1021 mkfakkqlsc igckalicns drtlcshckg reaelyyktv sqvseleelf grlwtqcqec
     1081 qgslhqdvlc tsrdcpifyr rkkaqkdmve akrqldrwnf
//
LOCUS       XP_040941251            1097 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase delta catalytic subunit isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941251
VERSION     XP_040941251.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085317.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1097
                     /product="DNA polymerase delta catalytic subunit isoform
                     X2"
                     /calculated_mol_wt=123987
     Region          54..1096
                     /region_name="PTZ00166"
                     /note="DNA polymerase delta catalytic subunit;
                     Provisional"
                     /db_xref="CDD:240301"
     CDS             1..1097
                     /gene="LOC107893529"
                     /coded_by="XM_041085317.1:71..3364"
                     /db_xref="GeneID:107893529"
ORIGIN      
        1 mnkggnsrkr ppppsshqps palkhqattp tppppsteed fvdedvffde tlmgeedves
       61 lilrdfeerq alasrlskwa rpplsdayis qsrsivfqql eidyvigesh knllpdsscq
      121 aaiirifgvt geghsvcclv hgfepyfyis cppgmgpddi shfhqtlegr mkemnrnskv
      181 pkfvrrielv qkrsimyyqq qksqpflkiv valptmvatc rgildrgiqi dglgmksfit
      241 yesnvlfalr fmidcnivgg nwieipagky kktaknmsyc qlefdclysd lishapegef
      301 skmapfrils fdiecagrkg hfpepsqdpv iqvanlvtlq gedqpfirnv mtlkscspiv
      361 gvdvmsfdte kevllawref irevdpdiii gynickfdlp ylieraqtlg iaefpilgri
      421 rnsrvrvkdt tfssrqygtr eskevtvegr vqfdllqamq rdyklssysl nsvsahflse
      481 qkedvhhsii sdlqngnaet rrrlavyclk daylpqrlld klmyvynyve marvtgvpis
      541 fllsrgqsik vlsqllrksk qknlvipnvk qagseqgtfe gatvleakag fyekpiatld
      601 faslypsimm aynlcyctlv tpedvrklnl ppecvnrtps getfvkpelq kgilpeilee
      661 llaarkraka dlkeakdple kavldgrqla lkvsansvyg ftgatvgqlp cleisssvts
      721 ygrqmiehtk klvedkftvl ggyehnaevi ygdtdsvmvq fgvsdveaam nlgreaaehi
      781 sgtftkpikl efekvyypyl liskkryagl fwtnpqkfdk mdtkgietvr rdncllvknl
      841 vteclhkili drdipgavqy vkntisdllm nrmdlsllvi tkgltktgdd yevkaahvel
      901 aermrkrdpa tapnvgdrvp yviikaakga kayersedpi yvlennipid pqyylenqis
      961 kpllrifepi lknaskellh gshtrsisis tpsnsgimkf akkqlscigc kalicnsdrt
     1021 lcshckgrea elyyktvsqv seleelfgrl wtqcqecqgs lhqdvlctsr dcpifyrrkk
     1081 aqkdmveakr qldrwnf
//
LOCUS       XP_016674049            1097 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase delta catalytic subunit isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674049
VERSION     XP_016674049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818560.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1097
                     /product="DNA polymerase delta catalytic subunit isoform
                     X2"
                     /calculated_mol_wt=123987
     Region          54..1096
                     /region_name="PTZ00166"
                     /note="DNA polymerase delta catalytic subunit;
                     Provisional"
                     /db_xref="CDD:240301"
     CDS             1..1097
                     /gene="LOC107893529"
                     /coded_by="XM_016818560.2:71..3364"
                     /db_xref="GeneID:107893529"
ORIGIN      
        1 mnkggnsrkr ppppsshqps palkhqattp tppppsteed fvdedvffde tlmgeedves
       61 lilrdfeerq alasrlskwa rpplsdayis qsrsivfqql eidyvigesh knllpdsscq
      121 aaiirifgvt geghsvcclv hgfepyfyis cppgmgpddi shfhqtlegr mkemnrnskv
      181 pkfvrrielv qkrsimyyqq qksqpflkiv valptmvatc rgildrgiqi dglgmksfit
      241 yesnvlfalr fmidcnivgg nwieipagky kktaknmsyc qlefdclysd lishapegef
      301 skmapfrils fdiecagrkg hfpepsqdpv iqvanlvtlq gedqpfirnv mtlkscspiv
      361 gvdvmsfdte kevllawref irevdpdiii gynickfdlp ylieraqtlg iaefpilgri
      421 rnsrvrvkdt tfssrqygtr eskevtvegr vqfdllqamq rdyklssysl nsvsahflse
      481 qkedvhhsii sdlqngnaet rrrlavyclk daylpqrlld klmyvynyve marvtgvpis
      541 fllsrgqsik vlsqllrksk qknlvipnvk qagseqgtfe gatvleakag fyekpiatld
      601 faslypsimm aynlcyctlv tpedvrklnl ppecvnrtps getfvkpelq kgilpeilee
      661 llaarkraka dlkeakdple kavldgrqla lkvsansvyg ftgatvgqlp cleisssvts
      721 ygrqmiehtk klvedkftvl ggyehnaevi ygdtdsvmvq fgvsdveaam nlgreaaehi
      781 sgtftkpikl efekvyypyl liskkryagl fwtnpqkfdk mdtkgietvr rdncllvknl
      841 vteclhkili drdipgavqy vkntisdllm nrmdlsllvi tkgltktgdd yevkaahvel
      901 aermrkrdpa tapnvgdrvp yviikaakga kayersedpi yvlennipid pqyylenqis
      961 kpllrifepi lknaskellh gshtrsisis tpsnsgimkf akkqlscigc kalicnsdrt
     1021 lcshckgrea elyyktvsqv seleelfgrl wtqcqecqgs lhqdvlctsr dcpifyrrkk
     1081 aqkdmveakr qldrwnf
//
LOCUS       XP_040941252             937 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase delta catalytic subunit isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941252
VERSION     XP_040941252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085318.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..937
                     /product="DNA polymerase delta catalytic subunit isoform
                     X3"
                     /calculated_mol_wt=105467
     Region          54..929
                     /region_name="PTZ00166"
                     /note="DNA polymerase delta catalytic subunit;
                     Provisional"
                     /db_xref="CDD:240301"
     CDS             1..937
                     /gene="LOC107893529"
                     /coded_by="XM_041085318.1:73..2886"
                     /db_xref="GeneID:107893529"
ORIGIN      
        1 mnkggnsrkr ppppsshqps palkhqattp tppppsteed fvdedvffde tlmgeedves
       61 lilrdfeerq alasrlskwa rpplsdayis qsrsivfqql eidyvigesh knllpdsscq
      121 aaiirifgvt geghsvcclv hgfepyfyis cppgmgpddi shfhqtlegr mkemnrnskv
      181 pkfvrrielv qkrsimyyqq qksqpflkiv valptmvatc rgildrgiqi dglgmksfit
      241 yesnvlfalr fmidcnivgg nwieipagky kktaknmsyc qlefdclysd lishapegef
      301 skmapfrils fdiecagrkg hfpepsqdpv iqvanlvtlq gedqpfirnv mtlkscspiv
      361 gvdvmsfdte kevllawref irevdpdiii gynickfdlp ylieraqtlg iaefpilgri
      421 rnsrvrvkdt tfssrqygtr eskevtvegr vqfdllqamq rdyklssysl nsvsahflse
      481 qkedvhhsii sdlqngnaet rrrlavyclk gigegillwa snpslvevyl lsedaylpqr
      541 lldklmyvyn yvemarvtgv pisfllsrgq sikvlsqllr kskqknlvip nvkqagseqg
      601 tfegatvlea kagfyekpia tldfaslyps immaynlcyc tlvtpedvrk lnlppecvnr
      661 tpsgetfvkp elqkgilpei leellaarkr akadlkeakd plekavldgr qlalkvsans
      721 vygftgatvg qlpcleisss vtsygrqmie htkklvedkf tvlggyehna eviygdtdsv
      781 mvqfgvsdve aamnlgreaa ehisgtftkp iklefekvyy pylliskkry aglfwtnpqk
      841 fdkmdtkgie tvrrdncllv knlvteclhk ilidrdipga vqyvkntisd llmnrmdlsl
      901 lvitkgltkt gddyevkaah velaermrki svvvaff
//
LOCUS       XP_016674050             277 aa            linear   PLN 06-AUG-2024
DEFINITION  septum-promoting GTP-binding protein 1 [Gossypium hirsutum].
ACCESSION   XP_016674050
VERSION     XP_016674050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818561.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..277
                     /product="septum-promoting GTP-binding protein 1"
                     /calculated_mol_wt=31000
     Region          94..274
                     /region_name="Spg1"
                     /note="Septum-promoting GTPase (Spg1); cd04128"
                     /db_xref="CDD:206701"
     Site            94..95
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206701"
     Site            100..107
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206701"
     Site            order(102..108,123..124,150,204..205,207,239..241)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206701"
     Site            order(108..117,118,122..123)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206701"
     Site            order(122,126..133,140,142)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206701"
     Site            122..130
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206701"
     Site            124
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206701"
     Site            order(125,127..129,144,146,153..154,157,161,163..166)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206701"
     Site            order(125..126,128,146..147,154,156,158..160)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206701"
     Site            125..129
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206701"
     Site            142..146
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206701"
     Site            147..150
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206701"
     Site            order(150,152..162)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206701"
     Site            153..158
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206701"
     Site            161..165
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206701"
     Site            170..175
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206701"
     Site            193..201
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206701"
     Site            204..207
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206701"
     Site            239..241
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206701"
     Site            254..256
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206701"
     CDS             1..277
                     /gene="LOC107893530"
                     /coded_by="XM_016818561.2:123..956"
                     /db_xref="GeneID:107893530"
ORIGIN      
        1 mtlpsmktvh lntkwgiler vsifrrffsf lwdkilvcsi arpiqyrrlt rpdsssssss
       61 pvevvvvddn ktlpedhppm icngneadsd lvslkisllg dcqigktsfl vkyvgdeqek
      121 slrmtglnlv nktlfvqgar iafsiwdvgg dsnsldllpi acknavailf mfdltsrctl
      181 ngvvgwysqa rkwnqtaipi lvgtkfddfv glppdlqwti vtqarayara mnatlffssa
      241 thninvnkif kfimaklfnl pwtvernlti gepiidf
//
LOCUS       XP_016674051             374 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674051
VERSION     XP_016674051.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818562.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..374
                     /product="FHA domain-containing protein DDL isoform X1"
                     /calculated_mol_wt=43273
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          221..370
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(282..283,298..299,301,333..334)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438770"
     CDS             1..374
                     /gene="LOC107893531"
                     /coded_by="XM_016818562.2:197..1321"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehsrddedd svakmkaaee aleakqkqqk ptfelsgkla aetnrvrgvt
      241 llfneppdar kpdirwrlyv fkagevlnep lyihrqscyl fgrerrvadv ptdhpscskq
      301 haviqfrqve keqpdgtltk qvrpyimdlg stnktfindn pvepqryyel fekdtikfgn
      361 ssreyvllhe nssq
//
LOCUS       XP_016674052             373 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674052
VERSION     XP_016674052.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818563.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..373
                     /product="FHA domain-containing protein DDL isoform X2"
                     /calculated_mol_wt=43186
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          220..369
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(281..282,297..298,300,332..333)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438770"
     CDS             1..373
                     /gene="LOC107893531"
                     /coded_by="XM_016818563.2:233..1354"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehrddedds vakmkaaeea leakqkqqkp tfelsgklaa etnrvrgvtl
      241 lfneppdark pdirwrlyvf kagevlnepl yihrqscylf grerrvadvp tdhpscskqh
      301 aviqfrqvek eqpdgtltkq vrpyimdlgs tnktfindnp vepqryyelf ekdtikfgns
      361 sreyvllhen ssq
//
LOCUS       XP_040941253             373 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941253
VERSION     XP_040941253.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085319.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..373
                     /product="FHA domain-containing protein DDL isoform X2"
                     /calculated_mol_wt=43186
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          220..369
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(281..282,297..298,300,332..333)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438770"
     CDS             1..373
                     /gene="LOC107893531"
                     /coded_by="XM_041085319.1:122..1243"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehrddedds vakmkaaeea leakqkqqkp tfelsgklaa etnrvrgvtl
      241 lfneppdark pdirwrlyvf kagevlnepl yihrqscylf grerrvadvp tdhpscskqh
      301 aviqfrqvek eqpdgtltkq vrpyimdlgs tnktfindnp vepqryyelf ekdtikfgns
      361 sreyvllhen ssq
//
LOCUS       XP_016674053             373 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016674053
VERSION     XP_016674053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818564.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..373
                     /product="FHA domain-containing protein DDL isoform X3"
                     /calculated_mol_wt=43145
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          220..369
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(281..282,297..298,300,332..333)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438770"
     CDS             1..373
                     /gene="LOC107893531"
                     /coded_by="XM_016818564.2:197..1318"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehsrddedd svakmkaaee aleakqkqkp tfelsgklaa etnrvrgvtl
      241 lfneppdark pdirwrlyvf kagevlnepl yihrqscylf grerrvadvp tdhpscskqh
      301 aviqfrqvek eqpdgtltkq vrpyimdlgs tnktfindnp vepqryyelf ekdtikfgns
      361 sreyvllhen ssq
//
LOCUS       XP_016674054             372 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016674054
VERSION     XP_016674054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818565.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="FHA domain-containing protein DDL isoform X4"
                     /calculated_mol_wt=43058
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          219..368
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(280..281,296..297,299,331..332)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438770"
     CDS             1..372
                     /gene="LOC107893531"
                     /coded_by="XM_016818565.2:236..1354"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehrddedds vakmkaaeea leakqkqkpt felsgklaae tnrvrgvtll
      241 fneppdarkp dirwrlyvfk agevlneply ihrqscylfg rerrvadvpt dhpscskqha
      301 viqfrqveke qpdgtltkqv rpyimdlgst nktfindnpv epqryyelfe kdtikfgnss
      361 reyvllhens sq
//
LOCUS       XP_040941254             372 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941254
VERSION     XP_040941254.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085320.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="FHA domain-containing protein DDL isoform X4"
                     /calculated_mol_wt=43058
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          219..368
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(280..281,296..297,299,331..332)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438770"
     CDS             1..372
                     /gene="LOC107893531"
                     /coded_by="XM_041085320.1:122..1240"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehrddedds vakmkaaeea leakqkqkpt felsgklaae tnrvrgvtll
      241 fneppdarkp dirwrlyvfk agevlneply ihrqscylfg rerrvadvpt dhpscskqha
      301 viqfrqveke qpdgtltkqv rpyimdlgst nktfindnpv epqryyelfe kdtikfgnss
      361 reyvllhens sq
//
LOCUS       XP_016674055             348 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016674055
VERSION     XP_016674055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818566.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..348
                     /product="FHA domain-containing protein DDL isoform X5"
                     /calculated_mol_wt=40000
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          221..>323
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     CDS             1..348
                     /gene="LOC107893531"
                     /coded_by="XM_016818566.2:197..1243"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehsrddedd svakmkaaee aleakqkqqk ptfelsgkla aetnrvrgvt
      241 llfneppdar kpdirwrlyv fkagevlnep lyihrqscyl fgrerrvadv ptdhpscskq
      301 haviqfrqve keqpdgtltk qprvcstare lfpvrhahah nqkatati
//
LOCUS       XP_040941255             347 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040941255
VERSION     XP_040941255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085321.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..347
                     /product="FHA domain-containing protein DDL isoform X6"
                     /calculated_mol_wt=39872
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          220..>322
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     CDS             1..347
                     /gene="LOC107893531"
                     /coded_by="XM_041085321.1:197..1240"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehsrddedd svakmkaaee aleakqkqkp tfelsgklaa etnrvrgvtl
      241 lfneppdark pdirwrlyvf kagevlnepl yihrqscylf grerrvadvp tdhpscskqh
      301 aviqfrqvek eqpdgtltkq prvcstarel fpvrhahahn qkatati
//
LOCUS       XP_040941256             346 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040941256
VERSION     XP_040941256.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085322.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..346
                     /product="FHA domain-containing protein DDL isoform X7"
                     /calculated_mol_wt=39785
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          219..>321
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     CDS             1..346
                     /gene="LOC107893531"
                     /coded_by="XM_041085322.1:197..1237"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehrddedds vakmkaaeea leakqkqkpt felsgklaae tnrvrgvtll
      241 fneppdarkp dirwrlyvfk agevlneply ihrqscylfg rerrvadvpt dhpscskqha
      301 viqfrqveke qpdgtltkqp rvcstarelf pvrhahahnq katati
//
LOCUS       XP_040941257             346 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein DDL isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040941257
VERSION     XP_040941257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085323.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..346
                     /product="FHA domain-containing protein DDL isoform X7"
                     /calculated_mol_wt=39785
     Region          10..>121
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          219..>321
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     CDS             1..346
                     /gene="LOC107893531"
                     /coded_by="XM_041085323.1:122..1162"
                     /db_xref="GeneID:107893531"
ORIGIN      
        1 mgrnssnhse spvrrrgspl rrspsnrers pgrhksshrg sspvreksps rhrrshrdhs
       61 lerekrssht kspkhassrs psprtkrlrr peaekevekv ereyernhsr gseksthkdr
      121 asgkeriser emggdrkdrr sgrddidsks srgrqersvs psdrhhrsrh rsrspasnsr
      181 srdevnnsrg aehrddedds vakmkaaeea leakqkqkpt felsgklaae tnrvrgvtll
      241 fneppdarkp dirwrlyvfk agevlneply ihrqscylfg rerrvadvpt dhpscskqha
      301 viqfrqveke qpdgtltkqp rvcstarelf pvrhahahnq katati
//
LOCUS       XP_016704772             477 aa            linear   PLN 06-AUG-2024
DEFINITION  tryptophan synthase beta chain 1 [Gossypium hirsutum].
ACCESSION   XP_016704772
VERSION     XP_016704772.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849283.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704772.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..477
                     /product="tryptophan synthase beta chain 1"
                     /calculated_mol_wt=51516
     Region          73..477
                     /region_name="PLN02618"
                     /note="tryptophan synthase, beta chain"
                     /db_xref="CDD:215333"
     Site            order(171..172,199,275,317..321,435,461)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107207"
     Site            172
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107207"
     CDS             1..477
                     /gene="LOC107919875"
                     /coded_by="XM_016849283.2:278..1711"
                     /db_xref="GeneID:107919875"
ORIGIN      
        1 mpsnmaatat statfrlgnp lssssfssss vysskilpvn fsqfalqtsp vksfsvsctv
       61 trepvpaapv smdsdpngwk rpdsfgrfgk fggkyvpetl msalseldta fhslskdekf
      121 qeelagilkd yvgresplyf aerlsehykr pngegpdiyl kredlnhtga hkinnavaqa
      181 llakrlgkkr iiaetgagqh gvatatvcar fglqciiymg aqdmerqaln vfrmrllgae
      241 vravhsgtat lkdatseair dwvtnvetth yilgsvagph pypvmvrefh avigketrkq
      301 alekwggkpd vlvacvgggs namglfhefv ndkdvrligv eaagfgldsg khaatltkge
      361 vgvlhgamsy llqdedgqiv ephsisagld ypgvgpehsf lkdvgraeyh svtdeealea
      421 fkrlsrlegi ipaletshal ayleqlcptl pndtkvvvnc sgrgdkdvqt vikhlqv
//
LOCUS       XP_040941258             390 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate/phosphate translocator 1, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040941258
VERSION     XP_040941258.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085324.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..390
                     /product="glucose-6-phosphate/phosphate translocator 1,
                     chloroplastic"
                     /calculated_mol_wt=42390
     Region          98..386
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; pfam03151"
                     /db_xref="CDD:308657"
     CDS             1..390
                     /gene="LOC121212492"
                     /coded_by="XM_041085324.1:193..1365"
                     /db_xref="GeneID:121212492"
ORIGIN      
        1 msfslkqsal aacsdvsnsv lqrrslscrs silpplvfqn nskrtnlsls kplhvsavei
       61 igkdkepvik crayeadksq piqaaaqevk seaakrvkig iyfatwwaln vvfniynkkv
      121 lnaypypwlt stlslacgsl mmliswatri aeapktdfef wktlfpvava htighvaatv
      181 smskvavsft hiiksgepaf svlvsslllg esfppavyls lvpiiggcal aavtelnfnm
      241 tgfmgamisn lafvfrnifs kkgmkgnsvs gmnyyaclsm lslviltpfa iavegpqmwa
      301 agwekalsqi gpqfiwwvaa qsifyhlynq vsymsldqis pltfsigntm krisvivssi
      361 iifhtpvqpv navgaaiail gtflysqaka
//
LOCUS       XP_016675145             444 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14103 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675145
VERSION     XP_016675145.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819656.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675145.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..444
                     /product="F-box/LRR-repeat protein At4g14103 isoform X1"
                     /calculated_mol_wt=50243
     Region          22..57
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(25..26,28..30,33..34,37,48..50,52,55)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438931"
     Site            order(25,29,32..33,36..37,41,43..44,48..50,52)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          148..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          172..197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          198..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          221..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          266..294
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          295..320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          321..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          375..444
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..444
                     /gene="LOC107894375"
                     /coded_by="XM_016819656.2:134..1468"
                     /db_xref="GeneID:107894375"
ORIGIN      
        1 maayqrkrrf anqtrdkdld rlsglpdkvi lqiisllplk eivrtsilai rwkdlfslvs
       61 diniddnnvi rkslgngymn iverflfsrk rdvginkfrl kcgkivdpfr ingwiqyalg
      121 yhvkeldlti gikgfnelnf gvftcktlvi lrlsmdkgsi lsvptyfrlp nlkvlhlglm
      181 kcsddgsvdr lfsgcislee lhlrncevsn mnklrvgnat lkklflsgfm gtdheieiia
      241 pnlvhfsyyy tgtkgfslin lnslseariy igpylfstid faptatalmn gvsqarslyl
      301 tlysskpill tpglvpqfpn ltylnlemgg clpewkilla nspcldtlvl dfefsgsele
      361 shnngrdete kvpgclmykv kiikllsfqg kpfesqvvey llknakvler ftvrlsgkkr
      421 lrtkiskevr alsrvskkcq vtii
//
LOCUS       XP_040941259             366 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box protein At1g58310 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941259
VERSION     XP_040941259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085325.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..366
                     /product="putative F-box protein At1g58310 isoform X2"
                     /calculated_mol_wt=41248
     Region          70..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          94..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          120..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          143..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          188..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          217..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          297..366
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..366
                     /gene="LOC107894375"
                     /coded_by="XM_041085325.1:319..1419"
                     /db_xref="GeneID:107894375"
ORIGIN      
        1 mniverflfs rkrdvginkf rlkcgkivdp fringwiqya lgyhvkeldl tigikgfnel
       61 nfgvftcktl vilrlsmdkg silsvptyfr lpnlkvlhlg lmkcsddgsv drlfsgcisl
      121 eelhlrncev snmnklrvgn atlkklflsg fmgtdheiei iapnlvhfsy yytgtkgfsl
      181 inlnslsear iyigpylfst idfaptatal mngvsqarsl yltlysskpi lltpglvpqf
      241 pnltylnlem ggclpewkil lanspcldtl vldfefsgse leshnngrde tekvpgclmy
      301 kvkiikllsf qgkpfesqvv eyllknakvl erftvrlsgk krlrtkiske vralsrvskk
      361 cqvtii
//
LOCUS       XP_016675964             459 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/FBD/LRR-repeat protein At4g26340 [Gossypium hirsutum].
ACCESSION   XP_016675964
VERSION     XP_016675964.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820475.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..459
                     /product="F-box/FBD/LRR-repeat protein At4g26340"
                     /calculated_mol_wt=52232
     Region          34..69
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(37,41,44..45,48..49,53,55..56,60..62,64)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          187..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          213..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          236..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          284..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          315..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          388..459
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..459
                     /gene="LOC107895211"
                     /coded_by="XM_016820475.2:76..1455"
                     /db_xref="GeneID:107895211"
ORIGIN      
        1 maikrkqgfa naenlitrgv karrideedl adrlselpdn vilhimsslp mkeavrtcll
       61 strwkdlfts isnieldgvl rkgalrnrfm efvdgflslr kdisvdrfrl cygpgidhrk
      121 inewilyavr hgvrelelif qsgtfetrhf tdlelgvftc ktlltlrlfn lpslvltipt
      181 hsclpnlkgl hltflkfsdd esirrllssc nsleellvqs celsnlnkls vchptlkrlt
      241 isggfiapsc eveidtpnlv ffdfgcvyck etrlslrnln slseariyig fiamssnycn
      301 vtdsvfdvmr alscvqsfhl tgicsgiqam lqrpslipef pnltflkigt cnagwenmlv
      361 rcpcletlaf eledvdpvdw rtpkkypscl rhhikaikif alkrkniefq lveylfkkag
      421 vlesltveik svpkreqrmm sknicalpka skkchilii
//
LOCUS       XP_016675965             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675965
VERSION     XP_016675965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820476.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..144
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16785
     CDS             1..144
                     /gene="LOC107895213"
                     /coded_by="XM_016820476.2:21..455"
                     /db_xref="GeneID:107895213"
ORIGIN      
        1 mttsliiagl hsafphlmyr fqspkkqfpi nhslfrflfi fstkrplsdn cqsgsflfcr
       61 siskvyclri lsirggckaf rlgtwcpcvf qrdvslqarq lmpklrfvem ddrinsknhs
      121 iqisfgyfly vylwviwhvi gvfc
//
LOCUS       XP_016675472             221 aa            linear   PLN 06-AUG-2024
DEFINITION  putative FBD-associated F-box protein At3g50710 [Gossypium
            hirsutum].
ACCESSION   XP_016675472
VERSION     XP_016675472.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819983.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675472.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..221
                     /product="putative FBD-associated F-box protein At3g50710"
                     /calculated_mol_wt=25575
     Region          34..69
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(37,41,44..45,48..49,53,55..56,60..62,64)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          188..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..221
                     /gene="LOC107894750"
                     /coded_by="XM_016819983.2:260..925"
                     /db_xref="GeneID:107894750"
ORIGIN      
        1 maikrkqgfa naenlitrgv karrideedl adrlselpdn vilhimsslp mkeavrtcll
       61 strwkdlfts isnieldgvl rkrralrnrf mefvdgflsl rkdisvdrfr lcygpgidhp
      121 kinewilyav rhgvreleli fqsgtfetrh ftdlefwvft cktlltlrlf nlpslvltip
      181 thcclpnlkg lhltflkfsd desirrlhss cnsleellvq s
//
LOCUS       XP_040941261             191 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941261
VERSION     XP_040941261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085327.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..191
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21772
     CDS             1..191
                     /gene="LOC121212494"
                     /coded_by="XM_041085327.1:407..982"
                     /db_xref="GeneID:121212494"
ORIGIN      
        1 mkialftknk hgyvdgtylr vdlptglhpq wdccnaifls wilnivcqel svgivfassa
       61 clvwkdlqeh yskvdgskiy ylhhtissht qgsicsyfni rtilatfdyf aegffyfccc
      121 shgwtfavdv cwglvknmlv fttfthissi pilfvltnlp ifpcslllll wlyimihvyg
      181 mltlvtplfp q
//
LOCUS       XP_040941262              99 aa            linear   PLN 06-AUG-2024
DEFINITION  serine hydroxymethyltransferase 3, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040941262
VERSION     XP_040941262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085328.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..99
                     /product="serine hydroxymethyltransferase 3,
                     chloroplastic"
                     /calculated_mol_wt=11289
     Region          1..>67
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     CDS             1..99
                     /gene="LOC121202984"
                     /coded_by="XM_041085328.1:449..748"
                     /db_xref="GeneID:121202984"
ORIGIN      
        1 mevvgscltn kyskglpgks yyggneyide peilcqkral avfhldekkw ginvqplsgs
       61 pvnfeiwrlq aadceqieit kfsqqeferl qkcifqekt
//
LOCUS       XP_040941263              99 aa            linear   PLN 06-AUG-2024
DEFINITION  serine hydroxymethyltransferase 3, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040941263
VERSION     XP_040941263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085329.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..99
                     /product="serine hydroxymethyltransferase 3,
                     chloroplastic"
                     /calculated_mol_wt=11289
     Region          1..>67
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     CDS             1..99
                     /gene="LOC121202984"
                     /coded_by="XM_041085329.1:443..742"
                     /db_xref="GeneID:121202984"
ORIGIN      
        1 mevvgscltn kyskglpgks yyggneyide peilcqkral avfhldekkw ginvqplsgs
       61 pvnfeiwrlq aadceqieit kfsqqeferl qkcifqekt
//
LOCUS       XP_016674032             441 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59190 [Gossypium hirsutum].
ACCESSION   XP_016674032
VERSION     XP_016674032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818543.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..441
                     /product="F-box/LRR-repeat protein At3g59190"
                     /calculated_mol_wt=50791
     Region          14..49
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(17,21,24..25,28..29,33,35..36,40..42,44)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          142..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          164..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          189..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          213..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          261..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          293..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          370..439
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..441
                     /gene="LOC107893520"
                     /coded_by="XM_016818543.2:431..1756"
                     /db_xref="GeneID:107893520"
ORIGIN      
        1 makqaknegv ldristlpdh ilchmlcflp ikdavrtsvl sprwrylftf mstldlydyr
       61 qfrgftrrdf ndfknfvdrl llfpkqqvrl ecfrvtenas dgdcprlygw icavlsrgik
      121 elvvsygktl rlptllftcq slvtleldip gdmkippdvs lpnlkslnls nflfsdglif
      181 klvsschvle elymefvklg rnitevnihn lslkrmtlef vlvnrdkdyk mvinapnley
      241 fkiydmladg yrvssmnsle hanikvhqcp eyaiydvnre raatnllqai cnvkclylli
      301 thaetlipmg pepvfafhkl vqlkfvnete awvgtwilef lhcvpnleil hlaldaaseg
      361 ikplaenvps cvsfhlteir isrfvgdepm fqmisfflkh atvletliia mkyltekeel
      421 sitkrllelp rnsrscqvit e
//
LOCUS       XP_016674033             441 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59190 [Gossypium hirsutum].
ACCESSION   XP_016674033
VERSION     XP_016674033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818544.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..441
                     /product="F-box/LRR-repeat protein At3g59190"
                     /calculated_mol_wt=50791
     Region          14..49
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(17,21,24..25,28..29,33,35..36,40..42,44)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          142..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          164..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          189..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          213..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          261..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          293..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          370..439
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..441
                     /gene="LOC107893520"
                     /coded_by="XM_016818544.2:493..1818"
                     /db_xref="GeneID:107893520"
ORIGIN      
        1 makqaknegv ldristlpdh ilchmlcflp ikdavrtsvl sprwrylftf mstldlydyr
       61 qfrgftrrdf ndfknfvdrl llfpkqqvrl ecfrvtenas dgdcprlygw icavlsrgik
      121 elvvsygktl rlptllftcq slvtleldip gdmkippdvs lpnlkslnls nflfsdglif
      181 klvsschvle elymefvklg rnitevnihn lslkrmtlef vlvnrdkdyk mvinapnley
      241 fkiydmladg yrvssmnsle hanikvhqcp eyaiydvnre raatnllqai cnvkclylli
      301 thaetlipmg pepvfafhkl vqlkfvnete awvgtwilef lhcvpnleil hlaldaaseg
      361 ikplaenvps cvsfhlteir isrfvgdepm fqmisfflkh atvletliia mkyltekeel
      421 sitkrllelp rnsrscqvit e
//
LOCUS       XP_016674031             108 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase subunit d, mitochondrial-like [Gossypium hirsutum].
ACCESSION   XP_016674031
VERSION     XP_016674031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818542.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="ATP synthase subunit d, mitochondrial-like"
                     /calculated_mol_wt=12657
     Region          <44..>80
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     CDS             1..108
                     /gene="LOC107893519"
                     /coded_by="XM_016818542.2:275..601"
                     /db_xref="GeneID:107893519"
ORIGIN      
        1 mlvirfgwsf egftvtnviy ssiagveipk fvntvtpqyk pkfdellvel keaeekslke
       61 serlekeiae vqelkqkist mtadeyfekh pelkkkfdde irndywgy
//
LOCUS       XP_016674030             221 aa            linear   PLN 06-AUG-2024
DEFINITION  putative FBD-associated F-box protein At3g50710 [Gossypium
            hirsutum].
ACCESSION   XP_016674030
VERSION     XP_016674030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818541.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..221
                     /product="putative FBD-associated F-box protein At3g50710"
                     /calculated_mol_wt=25575
     Region          34..69
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(37,41,44..45,48..49,53,55..56,60..62,64)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          188..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..221
                     /gene="LOC107893518"
                     /coded_by="XM_016818541.2:266..931"
                     /db_xref="GeneID:107893518"
ORIGIN      
        1 maikrkkgfa naenlitrgv karrideedl adrlselpdn vilhimsslp mkeavrtcll
       61 strwkdlfts isnieldgvl rkrralrnrf mefvdgflsl rkdisvdrfr lcygpgidhp
      121 kinewilyav rhgvreleli fqsgtfetrh ftdlefwvft cktlltlrlf nlpslvltip
      181 thcclpnlkg lhltflkfsd desirrlhss cnsleellvq s
//
LOCUS       XP_040941264             108 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase subunit d, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941264
VERSION     XP_040941264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085330.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="ATP synthase subunit d, mitochondrial"
                     /calculated_mol_wt=12658
     Region          <44..>80
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     CDS             1..108
                     /gene="LOC121212496"
                     /coded_by="XM_041085330.1:169..495"
                     /db_xref="GeneID:121212496"
ORIGIN      
        1 mlvirfgwsf egftvtnviy ssiagveipk fvdtvtpqyk pkfdellvel keaeekslke
       61 serlekeiae vqelkqkist mtadeyfekh pelkkkfdde irndywgy
//
LOCUS       XP_016675934             443 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/FBD/LRR-repeat protein At1g78750 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675934
VERSION     XP_016675934.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820445.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675934.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..443
                     /product="F-box/FBD/LRR-repeat protein At1g78750 isoform
                     X1"
                     /calculated_mol_wt=50939
     Region          16..51
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(19,23,26..27,30..31,35,37..38,42..44,46)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          171..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          197..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          220..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          296..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          324..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          372..443
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..443
                     /gene="LOC107895186"
                     /coded_by="XM_016820445.2:138..1469"
                     /db_xref="GeneID:107895186"
ORIGIN      
        1 mgrrqqpetv gvldrinnlp dsilshilsf lpnkeavrts vlstrwkylf assisildfe
       61 hclknlyeed vnnfmnfvdt llfnprervh lesfwvndyf vddeddylpl ygwistalsr
      121 glkniginfi nekvpvlptl lftshslvtl tlflhikddm kvptnaclpn lknlcltnla
      181 fedgysilkl issclvledl tiydccfhsi selnihnhll rrlilcfehv cvrdydyvma
      241 idapslvyfe ytgivgkgyt lsnmkslvka eisishfhev hsersatqll qgicnvqslh
      301 laieafnetf frtrldpklv fhnlvelefh syycyrkgvr lveflhnvpn lktlildlad
      361 geeglrslpi pscllfhvke ikisgvdgsk yafemisyfl nhamvlekli lkminllgkd
      421 elcilkkllr lprnskkcev vvh
//
LOCUS       XP_016675935             402 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box/FBD/LRR-repeat protein At5g22670 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016675935
VERSION     XP_016675935.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820446.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675935.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..402
                     /product="putative F-box/FBD/LRR-repeat protein At5g22670
                     isoform X2"
                     /calculated_mol_wt=45969
     Region          16..47
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(19,23,26..27,30..31,35,37..38,42..44,46)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          130..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          156..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          179..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          255..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          283..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          331..402
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..402
                     /gene="LOC107895186"
                     /coded_by="XM_016820446.2:138..1346"
                     /db_xref="GeneID:107895186"
ORIGIN      
        1 mgrrqqpetv gvldrinnlp dsilshilsf lpnkeavrts vlstrervhl esfwvndyfv
       61 ddeddylply gwistalsrg lkniginfin ekvpvlptll ftshslvtlt lflhikddmk
      121 vptnaclpnl knlcltnlaf edgysilkli ssclvledlt iydccfhsis elnihnhllr
      181 rlilcfehvc vrdydyvmai dapslvyfey tgivgkgytl snmkslvkae isishfhevh
      241 sersatqllq gicnvqslhl aieafnetff rtrldpklvf hnlvelefhs yycyrkgvrl
      301 veflhnvpnl ktlildladg eeglrslpip scllfhvkei kisgvdgsky afemisyfln
      361 hamvleklil kminllgkde lcilkkllrl prnskkcevv vh
//
LOCUS       XP_016675140             165 aa            linear   PLN 06-AUG-2024
DEFINITION  vascular-related unknown protein 4 [Gossypium hirsutum].
ACCESSION   XP_016675140
VERSION     XP_016675140.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819651.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675140.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="vascular-related unknown protein 4"
                     /calculated_mol_wt=17965
     CDS             1..165
                     /gene="LOC107894371"
                     /coded_by="XM_016819651.2:45..542"
                     /db_xref="GeneID:107894371"
ORIGIN      
        1 mnsrsrssde necpeesswt lyfqdfsykn tiddlmnqns ssilshishh tpdaacsaag
       61 plpsldhtrl sfkkrkikgs ssgfidhdle dtatspansp kvynvgnlfd kqkddamgis
      121 qemkgsgsgk indevgfieg envghklkkk glclvplsmv lhylg
//
LOCUS       XP_016675936             480 aa            linear   PLN 06-AUG-2024
DEFINITION  protein disulfide-isomerase 5-3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675936
VERSION     XP_016675936.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820447.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="protein disulfide-isomerase 5-3 isoform X1"
                     /calculated_mol_wt=53897
     Region          7..98
                     /region_name="ERGIC_N"
                     /note="Endoplasmic Reticulum-Golgi Intermediate
                     Compartment (ERGIC); pfam13850"
                     /db_xref="CDD:464000"
     Region          144..258
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(170,173)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          <290..461
                     /region_name="COPIIcoated_ERV"
                     /note="Endoplasmic reticulum vesicle transporter;
                     pfam07970"
                     /db_xref="CDD:462327"
     CDS             1..480
                     /gene="LOC107895188"
                     /coded_by="XM_016820447.2:160..1602"
                     /db_xref="GeneID:107895188"
ORIGIN      
        1 mfssskiksv dfyrkiprdl teaslsgagl siiaalammf lfgmelndyl tvstttsivv
       61 dnssdgdflr idfnisfpal scefasvdvs dvlgtnrlni tktirkfsid pdlrptgaef
      121 hsgplphyik hgdevdeetn egsvalnsas fdklshqyqi lvvnfyapwc ywstrlkpsw
      181 ekaakiikqr ydpevdgril lakvdcteev dlcrrnhiqg ypsirifrkg sdvrethghh
      241 ehesyygdrd tdtlvktmed lvdsipqedq kialedksnv tkrpaplsgg criegyvrvk
      301 kvpgnliisa rsgshsfdas kmnmshvish lsfgktvspq vlndvkrlip ylgrshdkln
      361 grsfinhrdl danvtiehyl qvvktevvtt ksshdhriie eyeytahssl aqsvyipvak
      421 fhfelspmqv lvtedsksfs hfltnvcaii ggvftvagil dsifhntirl mkkveigkny
//
LOCUS       XP_016675937             443 aa            linear   PLN 06-AUG-2024
DEFINITION  protein disulfide-isomerase 5-3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675937
VERSION     XP_016675937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820448.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..443
                     /product="protein disulfide-isomerase 5-3 isoform X2"
                     /calculated_mol_wt=49971
     Region          <1..61
                     /region_name="ERGIC_N"
                     /note="Endoplasmic Reticulum-Golgi Intermediate
                     Compartment (ERGIC); pfam13850"
                     /db_xref="CDD:464000"
     Region          107..221
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(133,136)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          <253..424
                     /region_name="COPIIcoated_ERV"
                     /note="Endoplasmic reticulum vesicle transporter;
                     pfam07970"
                     /db_xref="CDD:462327"
     CDS             1..443
                     /gene="LOC107895188"
                     /coded_by="XM_016820448.2:207..1538"
                     /db_xref="GeneID:107895188"
ORIGIN      
        1 mmflfgmeln dyltvsttts ivvdnssdgd flridfnisf palscefasv dvsdvlgtnr
       61 lnitktirkf sidpdlrptg aefhsgplph yikhgdevde etnegsvaln sasfdklshq
      121 yqilvvnfya pwcywstrlk pswekaakii kqrydpevdg rillakvdct eevdlcrrnh
      181 iqgypsirif rkgsdvreth ghhehesyyg drdtdtlvkt medlvdsipq edqkialedk
      241 snvtkrpapl sggcriegyv rvkkvpgnli isarsgshsf daskmnmshv ishlsfgktv
      301 spqvlndvkr lipylgrshd klngrsfinh rdldanvtie hylqvvktev vttksshdhr
      361 iieeyeytah sslaqsvyip vakfhfelsp mqvlvtedsk sfshfltnvc aiiggvftva
      421 gildsifhnt irlmkkveig kny
//
LOCUS       XP_016675938             217 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016675938
VERSION     XP_016675938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820449.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..217
                     /product="early nodulin-like protein 3"
                     /calculated_mol_wt=23114
     Region          47..134
                     /region_name="OsENODL1_like"
                     /note="Early nodulin-like protein (OsENODL1) and similar
                     proteins; cd11019"
                     /db_xref="CDD:259905"
     Region          123..>216
                     /region_name="rad23"
                     /note="UV excision repair protein Rad23; TIGR00601"
                     /db_xref="CDD:273167"
     CDS             1..217
                     /gene="LOC107895190"
                     /coded_by="XM_016820449.2:212..865"
                     /db_xref="GeneID:107895190"
ORIGIN      
        1 mansilitdy qrkafnvvgl glsfmllmiq kgyardfsvn wglhngtnae nynqwaeknr
       61 fqigdslvft ytpnddsvlq vnedaykncs vesplssytd ghtvfslshs gpyyfisgnk
      121 dnckkneklv vvvladrsnr sstanetnps spppsssidi mpspapsggs ppagtvenpt
      181 papsdeskpp naasavfmsv tasmgavfaa stlllgf
//
LOCUS       XP_016675939             665 aa            linear   PLN 06-AUG-2024
DEFINITION  COBRA-like protein 10 [Gossypium hirsutum].
ACCESSION   XP_016675939
VERSION     XP_016675939.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820450.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675939.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..665
                     /product="COBRA-like protein 10"
                     /calculated_mol_wt=74281
     Region          240..419
                     /region_name="COBRA"
                     /note="COBRA-like protein; pfam04833"
                     /db_xref="CDD:461450"
     CDS             1..665
                     /gene="LOC107895191"
                     /coded_by="XM_016820450.2:23..2020"
                     /db_xref="GeneID:107895191"
ORIGIN      
        1 mkmpwmklmc laflflslrn qicygapddy ddydeeeepk eknppgqdkc ngiflmytft
       61 ernkelphvk nvtaqawsfk skatlvntgl eelkgwkmfi rfqhrevlvs atnailvdga
      121 gdfpakvekg atlsgypntd lktsvdtagd ltkmsteief tgtmfglnek aiplpksirl
      181 andgwkcpml ttyrtflttc chkdpkyksl nqsakgkytp rqygdvnlmy dvlksyegsy
      241 eaqvtidndg tlsrldnwnl twewmrgefi hsmrgaytrr ieysdcifgl pgqylkgfdf
      301 sqvmnckkrp visdlpleka ndteighipn cckngslvsp vmdennarav fqlrvyklpp
      361 dtpktvlypp qrwnitslvs ahyhcsapvr vdpsafpeat gtgaktyava swqvvcnmtk
      421 pkkkrakccv sftayysnga vpcstcacgc ddsqtdkcnp ssramllppd alllpaenrt
      481 akikayaklk kkpvprampc pdncvvsinw hvssdhkagw tarmtlfnwg etqfkdwyaa
      541 velkkaasgy ddvysfngtk lvspkntiff qglkgleyli eikngssdsk pkvpgkqqsv
      601 isftkkkpea inirkgdgfp skvffngaec alpdslpsaa tllssmpllf fsaiafllit
      661 ypfhs
//
LOCUS       XP_016675941             113 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translation factor SUI1 homolog 2 [Gossypium hirsutum].
ACCESSION   XP_016675941
VERSION     XP_016675941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820452.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="protein translation factor SUI1 homolog 2"
                     /calculated_mol_wt=12478
     Region          5..113
                     /region_name="SUI1_MOF2"
                     /note="translation initiation factor SUI1, eukaryotic;
                     TIGR01160"
                     /db_xref="CDD:130228"
     Site            order(38,41..42,44,61,64..66,68..70,72,86,89)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            88..89
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..113
                     /gene="LOC107895192"
                     /coded_by="XM_016820452.2:318..659"
                     /db_xref="GeneID:107895192"
ORIGIN      
        1 msdldvqipt afdpfadana edsgagakey vhiriqqrng rkslttvqgl kkefsynkil
       61 kdlkkefccn gtvvqdpelg qviqlqgdqr knvstflvqa givkkeniki hgf
//
LOCUS       XP_016675942             381 aa            linear   PLN 06-AUG-2024
DEFINITION  polyubiquitin [Gossypium hirsutum].
ACCESSION   XP_016675942
VERSION     XP_016675942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820453.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..381
                     /product="polyubiquitin"
                     /calculated_mol_wt=42568
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          77..152
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(82..85,87,110..113,116,118,120,122..125,144..152)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(84..88,107..111,116,118,120,122..125,144,146..152)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          153..228
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(158..161,163,186..189,192,194,196,198..201,220..228)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(160..164,183..187,192,194,196,198..201,220,222..228)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          229..304
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(234..237,239,262..265,268,270,272,274..277,296..304)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(236..240,259..263,268,270,272,274..277,296,298..304)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          305..380
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(310..313,315,338..341,344,346,348,350..353,372..380)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(312..316,335..339,344,346,348,350..353,372,374..380)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     CDS             1..381
                     /gene="LOC107895193"
                     /coded_by="XM_016820453.2:158..1303"
                     /db_xref="GeneID:107895193"
ORIGIN      
        1 mqifvktltg ktitlevess dtidnvkaki qdkegippdq qrlifagkql edgrtladyn
       61 iqkestlhlv lrlrggmqif vktltgktit levessdtid nvkakiqdke gippdqqrli
      121 fagkqledgr tladyniqke stlhlvlrlr ggmqifvktl tgktitleve ssdtidnvka
      181 kiqdkegipp dqqrlifagk qledgrtlad yniqkestlh lvlrlrggmq ifvktltgkt
      241 itlevessdt idnvkakiqd kegippdqqr lifagkqled grtladyniq kestlhlvlr
      301 lrggmqifvk tltgktitle vessdtidnv kakiqdkegi ppdqqrlifa gkqledgrtl
      361 adyniqkest lhlvlrlrgg f
//
LOCUS       XP_016675943             141 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NDR1 [Gossypium hirsutum].
ACCESSION   XP_016675943
VERSION     XP_016675943.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820454.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..141
                     /product="protein NDR1"
                     /calculated_mol_wt=15595
     CDS             1..141
                     /gene="LOC107895194"
                     /coded_by="XM_016820454.2:268..693"
                     /db_xref="GeneID:107895194"
ORIGIN      
        1 mdtyfkpqmf hsnsvlafps qrlephswsy lkphakgyrk katkpgqgta nttvalravs
       61 engtgvfrvd matavkfktl ygyskrhkir igadvvvnas gvkvdrkgir lrsmapkmgn
      121 scvvllgalf nfllfalldf w
//
LOCUS       XP_040941265            1252 aa            linear   PLN 06-AUG-2024
DEFINITION  putative multidrug resistance protein [Gossypium hirsutum].
ACCESSION   XP_040941265
VERSION     XP_040941265.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085331.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1252
                     /product="putative multidrug resistance protein"
                     /calculated_mol_wt=137297
     Region          57..1244
                     /region_name="PTZ00265"
                     /note="multidrug resistance protein (mdr1); Provisional"
                     /db_xref="CDD:240339"
     Region          669..1249
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..1252
                     /gene="LOC107894373"
                     /coded_by="XM_041085331.1:57..3815"
                     /db_xref="GeneID:107894373"
ORIGIN      
        1 mvskdgmfry adnvdkllmf fgtlgsigdg lqypltmlvl skvineygdp naklsndtvd
       61 kyalrllyva ivvglsafve gvcwtrtaer qtsrirtkyl ksvlrqevgf fdtqetgist
      121 tfqvvstisa danaiqvaic dkipnclafl stfffclvvs filswritla aipltlffiv
      181 pglvfgklmm dvimkmiesy gvaggiaeqa issirtvysy vaenqtiekf shalertlel
      241 gvnqgfakgl lmgsmgsiyv gwafqawvgt ylvtekgekg gsvfaaginv vmgglsvlga
      301 lpnltgitea tvaatrifem vnrdpsidad dskgkalsyv rgeiefkdiy fsypsrpdsp
      361 vlqglnlrip agksvglvgg sgsgksttia llqrfydpnd gevlldgyki rrlqlkwlrs
      421 qmglvsqepv lfatsikeni lfgkeeasme dvisaakvan ahdfivklpe gyethvgqfg
      481 fqmsggqkqr iaiaralird prillldeat saldaqaeri vqeaidkask grtsiiiahr
      541 lmtirnanli vvlqdgrvie sgshnelmqm ndgeggeyhr mvelqkmalq nevsddssyk
      601 tegryhhrvn vaqspmsyrs saastpalsp fspalsvgtp ysytiqydpd ddsidenfkq
      661 vshptpsqwr llkmnapewg ralvgsvaai gsgavqpina ycvgllisiy frgnkseiks
      721 ksrtlsfvfl giaalnftss llqhynfaim gekltkrvre kfleklmtfe vgffdeeent
      781 saaictrlat easmvrslvg drmsllvqai fgsifayiva lklswrlslv miavqplvvg
      841 sfyarsmlmk smsgkaqkaq kegsqlasea vvnhrtitaf ssqkrilglf kdtlkgpkee
      901 svrhswlsgl glfssqffnt astalaywyg grlltqglit sehlfqaflv llftayviae
      961 agsmtndlsk gnsairsvfv ildrkteidp nhswalevkk tikgrielkn vffayptrpd
     1021 qlifkglnlr ieagrtvala gqsgsgkstv iglierfydp tkgsvfidaq diknynlrml
     1081 rthialvsqe ptlfagtire niaygkenak eseirkaakl anahefisgm kdgydtncge
     1141 rgvqlsggqk qrialarail knpsilllde atsaldsvse klvqealekm mvsrtcvvva
     1201 hrlstiqkad tiavikngkv aehgshnell slgrggayys liklqggssp yr
//
LOCUS       XP_016675944             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675944
VERSION     XP_016675944.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820455.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675944.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23904
     CDS             1..211
                     /gene="LOC107895195"
                     /coded_by="XM_016820455.2:122..757"
                     /db_xref="GeneID:107895195"
ORIGIN      
        1 mastllhfls ppnllhnhts nlssisnnps ktlhfpikct sptsessqsd fpspishett
       61 tspesfpiek rrrseivrer rprpdivkpe ppnfevgwrr tkeinlekpk gyvimdflek
      121 leglmgrefg stellakage ivaerareea evlrdegeve drmvteffrv lklmemdlam
      181 vkaavkdetl serleqakar crqailvans f
//
LOCUS       XP_016675945             370 aa            linear   PLN 06-AUG-2024
DEFINITION  polycomb group protein FIE1 [Gossypium hirsutum].
ACCESSION   XP_016675945
VERSION     XP_016675945.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820456.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675945.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..370
                     /product="polycomb group protein FIE1"
                     /calculated_mol_wt=41410
     Region          <24..160
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          87..126
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <96..365
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          131..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          178..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          243..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          294..335
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          342..364
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..370
                     /gene="LOC107895196"
                     /coded_by="XM_016820456.2:93..1205"
                     /db_xref="GeneID:107895196"
ORIGIN      
        1 maktpiglep vvgslssskk keyrvtnrlq egkrplyavv fnfidsryfn vfatvggnrv
       61 tvyqcleggv iavlqsyvde dkdesfytvs wacnidgtpf vvaggingii rvidasneki
      121 hksfvghgds ineirtqplk pslivsaskd esvrlwnvht gicilifaga gghrnevlsv
      181 dfhpsdiyri ascgmdntvk iwsmkefwty veksftwtdl pskfptkyvq fpvflasvhs
      241 nyvdcnrwlg dfilsksvdn eivlwepkmk eqspgegtad ilqkypvpec diwfikfscd
      301 fhynaaaign regkifvwel qssppvliar lshaqskspi rqtatsfdgs tilsccedgt
      361 iwrwdsvqtn
//
LOCUS       XP_016675946             534 aa            linear   PLN 06-AUG-2024
DEFINITION  probable galacturonosyltransferase 12 [Gossypium hirsutum].
ACCESSION   XP_016675946
VERSION     XP_016675946.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820457.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675946.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..534
                     /product="probable galacturonosyltransferase 12"
                     /calculated_mol_wt=60718
     Region          1..532
                     /region_name="PLN02659"
                     /note="Probable galacturonosyltransferase"
                     /db_xref="CDD:215356"
     CDS             1..534
                     /gene="LOC107895197"
                     /coded_by="XM_016820457.2:282..1886"
                     /db_xref="GeneID:107895197"
ORIGIN      
        1 mqlhvspslr hvtvfpgkgv refikvrigs rwisyrmlfy sllfftfllr fifvfstvdt
       61 idgdpskcst igclgkrigp rilgrmesnv peviyqilde aiseeevepk sdipqtlqdf
      121 madikqttpd akafalklrq mvllleqrtr kakiqeylyr hvasssipkh lhclalklan
      181 ehsnnaaarl qlpsadlvpt lvdnsyfhfv lasdnvlavs vvakslikna lhprkfvlhi
      241 itdrktyapm qawfslhpla pavievkalh qfdwlskgkv pvleamekdq rvrskfrggs
      301 saivaknyte kpqviaaklq alspkynslm nhirihlpel fpslnkvvfl dddiviqtdl
      361 salwdidmng kvngavetcr gedsfvmskr fksylnfshp liannfdpne cawaygmnif
      421 dleawrktni tltyyhwleq nlksdlslwq lgtlppglia fhgqvhvidp fwhmlglgyq
      481 dnttlsdaet agvihfngra kpwldiafpq lrplwakyig fsdkfikgch irvy
//
LOCUS       XP_016675948             237 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor ILR3 [Gossypium hirsutum].
ACCESSION   XP_016675948
VERSION     XP_016675948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820459.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..237
                     /product="transcription factor ILR3"
                     /calculated_mol_wt=26082
     Region          79..154
                     /region_name="bHLH_AtILR3_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein IAA-leucine resistant 3
                     (ILR3) and similar proteins; cd11446"
                     /db_xref="CDD:381452"
     Site            order(79..80,83..84,86..87,91,110..111)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381452"
     Site            order(89..90,93,96..97,100,111..112,115..116,119,122,
                     125..126,129,132..133,135..136,139,142..143,146,149..150)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381452"
     Region          <140..177
                     /region_name="BRLZ"
                     /note="basic region leucin zipper; smart00338"
                     /db_xref="CDD:197664"
     Site            order(142..143,146..147,149..150,153..154,156..157,
                     160..161,163..164,167..168,170..171)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..237
                     /gene="LOC107895198"
                     /coded_by="XM_016820459.2:267..980"
                     /db_xref="GeneID:107895198"
ORIGIN      
        1 mvppenpsyw shfdystlid dipvpdgpyt gfswstqptn aptavnveid nsfgdldgla
       61 esgskkrgrs escnpssska creklrrdrl ndkfmelgai lepgrppktd ksailvdavr
      121 mvtqlrdeaq kmkdsnsslq erikelkaek nelreekqrl kaekekleqq lktmnaqpsf
      181 mppapaipaa faaaaqgqap gnklvpffgy pgvamwqfmp paavdtsqdh vlrppva
//
LOCUS       XP_016675949             224 aa            linear   PLN 06-AUG-2024
DEFINITION  photosynthetic NDH subunit of lumenal location 3, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675949
VERSION     XP_016675949.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820460.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..224
                     /product="photosynthetic NDH subunit of lumenal location
                     3, chloroplastic isoform X1"
                     /calculated_mol_wt=25122
     Region          3..224
                     /region_name="PsbQ"
                     /note="Oxygen evolving enhancer protein 3 (PsbQ); cl23783"
                     /db_xref="CDD:420004"
     CDS             1..224
                     /gene="LOC107895199"
                     /coded_by="XM_016820460.2:161..835"
                     /db_xref="GeneID:107895199"
ORIGIN      
        1 mkmahlasln gitetlpaip klptirrtrk tskiigflgk ntsnfheqpp lqttrrmala
       61 fssialigts tngislaedn gywitdllpv psventeitn adtgtrsfvk kglyvanlnt
      121 knrmyrlkky afdllamadl igpdtlnyvk kylrlkstvm yydfdkiisa aatddkqpli
      181 tlanrlfdsf ekledaakmr nlpqtescyq dtkvilqevm erma
//
LOCUS       XP_016675950             223 aa            linear   PLN 06-AUG-2024
DEFINITION  photosynthetic NDH subunit of lumenal location 3, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675950
VERSION     XP_016675950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="photosynthetic NDH subunit of lumenal location
                     3, chloroplastic isoform X2"
                     /calculated_mol_wt=25020
     Region          3..223
                     /region_name="PsbQ"
                     /note="Oxygen evolving enhancer protein 3 (PsbQ); cl23783"
                     /db_xref="CDD:420004"
     CDS             1..223
                     /gene="LOC107895199"
                     /coded_by="XM_016820461.2:160..831"
                     /db_xref="GeneID:107895199"
ORIGIN      
        1 mkmahlasln gitetlpaip klptirrtrk tskiigflgk ntsnfheqpp lqttrrmala
       61 fssialigts tngislaedn gywitdllpv psvenkitna dtgtrsfvkk glyvanlntk
      121 nrmyrlkkya fdllamadli gpdtlnyvkk ylrlkstvmy ydfdkiisaa atddkqplit
      181 lanrlfdsfe kledaakmrn lpqtescyqd tkvilqevme rma
//
LOCUS       XP_016675951             197 aa            linear   PLN 06-AUG-2024
DEFINITION  21.7 kDa class VI heat shock protein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675951
VERSION     XP_016675951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="21.7 kDa class VI heat shock protein isoform X1"
                     /calculated_mol_wt=22461
     Region          85..180
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..197
                     /gene="LOC107895200"
                     /coded_by="XM_016820462.2:78..671"
                     /db_xref="GeneID:107895200"
ORIGIN      
        1 mtsclklevq tedqtphkwc islaedefkr llsqgnplvh kvfgegslfs pllfgkffdp
       61 sdafplwdfe sdsllsnlrn sgkssvdwfq tdqayvlkae lpagvgktnn vqihvekgki
      121 veifgqlkll qresqkkdwr scnwweygyv rrlelpedad wrrieaylsi davleiripr
      181 nllhsdtsas gvgknse
//
LOCUS       XP_016675952             196 aa            linear   PLN 06-AUG-2024
DEFINITION  21.7 kDa class VI heat shock protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016675952
VERSION     XP_016675952.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820463.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..196
                     /product="21.7 kDa class VI heat shock protein isoform X2"
                     /calculated_mol_wt=22390
     Region          85..179
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..196
                     /gene="LOC107895200"
                     /coded_by="XM_016820463.2:77..667"
                     /db_xref="GeneID:107895200"
ORIGIN      
        1 mtsclklevq tedqtphkwc islaedefkr llsqgnplvh kvfgegslfs pllfgkffdp
       61 sdafplwdfe sdsllsnlrn sgkssvdwfq tdqayvlkae lpgvgktnnv qihvekgkiv
      121 eifgqlkllq resqkkdwrs cnwweygyvr rlelpedadw rrieaylsid avleiriprn
      181 llhsdtsasg vgknse
//
LOCUS       XP_040941266             952 aa            linear   PLN 06-AUG-2024
DEFINITION  formin-like protein 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941266
VERSION     XP_040941266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085332.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..952
                     /product="formin-like protein 5 isoform X1"
                     /calculated_mol_wt=102519
     Region          485..887
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..952
                     /gene="LOC107895201"
                     /coded_by="XM_041085332.1:765..3623"
                     /db_xref="GeneID:107895201"
ORIGIN      
        1 mmlmvqgqmg lirtnslwfl vvllfasfav sldytkeeee eaflnqlvdp stgeiyddla
       61 ellwiscrqd lnnlkeafed pklrlseetr stindigaks hllakekfqk fikvirpelk
      121 qvlsdcvrkn kllfqesged scfktcypqy sgslfrwcev srkslaaqsi avgsalnlrp
      181 ttprssapap slanespdss tdlsvslals tspsihdkra vpareladds vsdyeedyee
      241 eggegeggtd hnkiiiiacv atavvtslia alilflcchr dsgsmvndes pllslrsdas
      301 ggsthapgss kessqhqkas tngsdyiesd alqisldgns sdgaaadask assessetpg
      361 nassllplpp gragpgglpp lkpppgkedl tpeapvpaks apppppppsl ksastnvgpp
      421 ppgapppppp kagappppps kagapppppp kagggprppp plgskgprpp napgrggpgs
      481 gsaskaklkp ffwdkvantp eqgqvwnqik ggsfqvndak ietlfgyspv eksksdkkds
      541 taqepqfiql ldgkkaqnla imlralnvts eevsdalvev ilklgnelpv ellqtllkma
      601 ptsdeelklr lftgeitqlg paerflkvvv dipfayqkme tllfmcslhd eltatresfq
      661 ileaackelk ssrlflklle avlktgnrmn dgtfrggaqa fkldtllkls dvkgvdgktt
      721 llhfvvleii rteglraari aresrsfssi ksedlledvs pddeeyyrnl glqavsnlss
      781 eleyvkkaaa ldaenlssnv akvghamvkt rnflntemkd ngeksgfhet lesfvknaes
      841 svmslleeek kvmdlvkstg dyfhgnvkkd eglrifsvvr dflvildkvc revknapkkp
      901 tqapkkqtsn astssesrva ppspdprqkl fptiaqqrkd dssstsssde ks
//
LOCUS       XP_040941267             951 aa            linear   PLN 06-AUG-2024
DEFINITION  formin-like protein 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941267
VERSION     XP_040941267.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085333.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..951
                     /product="formin-like protein 5 isoform X2"
                     /calculated_mol_wt=102461
     Region          484..886
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..951
                     /gene="LOC107895201"
                     /coded_by="XM_041085333.1:771..3626"
                     /db_xref="GeneID:107895201"
ORIGIN      
        1 mmlmvqgqmg lirtnslwfl vvllfasfav sldytkeeee eaflnqlvdp stgeiyddla
       61 ellwiscrqd lnnlkeafed pklrlseetr stindigaks hllakekfqk fikvirpelk
      121 qvlsdcvrkn kllfqesged scfktcypqy sgslfrwcev srkslaaqsi avgsalnlrp
      181 ttprssapap slanespdss tdlsvslals tspsihdkra vpareladds vsdyeedyee
      241 eggegeggtd hnkiiiiacv atavvtslia alilflcchr dsgsmvndes pllslrsdas
      301 gsthapgssk essqhqkast ngsdyiesda lqisldgnss dgaaadaska ssessetpgn
      361 assllplppg ragpgglppl kpppgkedlt peapvpaksa pppppppslk sastnvgppp
      421 pgappppppk agapppppsk agappppppk agggprpppp lgskgprppn apgrggpgsg
      481 saskaklkpf fwdkvantpe qgqvwnqikg gsfqvndaki etlfgyspve ksksdkkdst
      541 aqepqfiqll dgkkaqnlai mlralnvtse evsdalvevi lklgnelpve llqtllkmap
      601 tsdeelklrl ftgeitqlgp aerflkvvvd ipfayqkmet llfmcslhde ltatresfqi
      661 leaackelks srlflkllea vlktgnrmnd gtfrggaqaf kldtllklsd vkgvdgkttl
      721 lhfvvleiir teglraaria resrsfssik sedlledvsp ddeeyyrnlg lqavsnlsse
      781 leyvkkaaal daenlssnva kvghamvktr nflntemkdn geksgfhetl esfvknaess
      841 vmslleeekk vmdlvkstgd yfhgnvkkde glrifsvvrd flvildkvcr evknapkkpt
      901 qapkkqtsna stssesrvap pspdprqklf ptiaqqrkdd ssstsssdek s
//
LOCUS       XP_040941268             947 aa            linear   PLN 06-AUG-2024
DEFINITION  formin-like protein 5 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941268
VERSION     XP_040941268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085334.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..947
                     /product="formin-like protein 5 isoform X3"
                     /calculated_mol_wt=101952
     Region          485..882
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..947
                     /gene="LOC107895201"
                     /coded_by="XM_041085334.1:756..3599"
                     /db_xref="GeneID:107895201"
ORIGIN      
        1 mmlmvqgqmg lirtnslwfl vvllfasfav sldytkeeee eaflnqlvdp stgeiyddla
       61 ellwiscrqd lnnlkeafed pklrlseetr stindigaks hllakekfqk fikvirpelk
      121 qvlsdcvrkn kllfqesged scfktcypqy sgslfrwcev srkslaaqsi avgsalnlrp
      181 ttprssapap slanespdss tdlsvslals tspsihdkra vpareladds vsdyeedyee
      241 eggegeggtd hnkiiiiacv atavvtslia alilflcchr dsgsmvndes pllslrsdas
      301 ggsthapgss kessqhqkas tngsdyiesd alqisldgns sdgaaadask assessetpg
      361 nassllplpp gragpgglpp lkpppgkedl tpeapvpaks apppppppsl ksastnvgpp
      421 ppgapppppp kagappppps kagapppppp kagggprppp plgskgprpp napgrggpgs
      481 gsaskaklkp ffwdkvantp eqgqvwnqik ggsfqvndak ietlfgyspv eksksdkkds
      541 taqepqfiql ldgkkaqnla imlralnvts eevsdalveg nelpvellqt llkmaptsde
      601 elklrlftge itqlgpaerf lkvvvdipfa yqkmetllfm cslhdeltat resfqileaa
      661 ckelkssrlf lklleavlkt gnrmndgtfr ggaqafkldt llklsdvkgv dgkttllhfv
      721 vleiirtegl raariaresr sfssiksedl ledvspddee yyrnlglqav snlsseleyv
      781 kkaaaldaen lssnvakvgh amvktrnfln temkdngeks gfhetlesfv knaessvmsl
      841 leeekkvmdl vkstgdyfhg nvkkdeglri fsvvrdflvi ldkvcrevkn apkkptqapk
      901 kqtsnastss esrvappspd prqklfptia qqrkddssst sssdeks
//
LOCUS       XP_016675953             134 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H2A.6 [Gossypium hirsutum].
ACCESSION   XP_016675953
VERSION     XP_016675953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820464.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="histone H2A.6"
                     /calculated_mol_wt=13792
     Region          1..130
                     /region_name="PLN00157"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:177758"
     CDS             1..134
                     /gene="LOC107895202"
                     /coded_by="XM_016820464.2:296..700"
                     /db_xref="GeneID:107895202"
ORIGIN      
        1 magrgktlgs gaskkatsrs skaglqfpvg riarflkagk yaervgagap vylaavleyl
       61 aaevlelagn aardnkktri vprhiqlavr ndeelskllg dvtianggvm pnihnvllpk
      121 kaggsskvsg gddd
//
LOCUS       XP_040941269             436 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium/calmodulin-regulated receptor-like kinase 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941269
VERSION     XP_040941269.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085335.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..436
                     /product="calcium/calmodulin-regulated receptor-like
                     kinase 1 isoform X1"
                     /calculated_mol_wt=48196
     Region          118..384
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,194,242,244,
                     246..247,249,260,263,278..281)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,242,244,
                     246..247,249,260)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(122,192,194,242,244,246,263,278..281)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(259..265,272..274,277..281)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..436
                     /gene="LOC107895203"
                     /coded_by="XM_041085335.1:291..1601"
                     /db_xref="GeneID:107895203"
ORIGIN      
        1 mrgessglii gisigvvigv llaisalfci ryhrrrsqig nsssrrasti pirangadsc
       61 tilsdstigp dspvksgrng msvwiegfrr snvvsasgil eysykdlqka thnfttligq
      121 gafgpvykaq mstgetvavk vlatdskqge kefqtevmll grlhhrnlvn lvgycaekgq
      181 hmlvyvymsk gslashlytf clcagenhep lswnlrvyia ldvargleyl hdgavppvih
      241 rdikssnill dqsmrarvad fglsreemvd khaanirgtf gyldpeyist rtftkksdvy
      301 sfgvllfeli agrnplqglm eyvelaamst eekdgweeia dsrldgkfdv qelnevaala
      361 ykcvnrvpkk rpsmrdivqv ltrilktrhi kkhqislsva tagevsvdle qgetkipitv
      421 hqrdesmdsa tdtfem
//
LOCUS       XP_040941270             436 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium/calmodulin-regulated receptor-like kinase 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941270
VERSION     XP_040941270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085336.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..436
                     /product="calcium/calmodulin-regulated receptor-like
                     kinase 1 isoform X1"
                     /calculated_mol_wt=48196
     Region          118..384
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,194,242,244,
                     246..247,249,260,263,278..281)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,242,244,
                     246..247,249,260)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(122,192,194,242,244,246,263,278..281)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(259..265,272..274,277..281)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..436
                     /gene="LOC107895203"
                     /coded_by="XM_041085336.1:648..1958"
                     /db_xref="GeneID:107895203"
ORIGIN      
        1 mrgessglii gisigvvigv llaisalfci ryhrrrsqig nsssrrasti pirangadsc
       61 tilsdstigp dspvksgrng msvwiegfrr snvvsasgil eysykdlqka thnfttligq
      121 gafgpvykaq mstgetvavk vlatdskqge kefqtevmll grlhhrnlvn lvgycaekgq
      181 hmlvyvymsk gslashlytf clcagenhep lswnlrvyia ldvargleyl hdgavppvih
      241 rdikssnill dqsmrarvad fglsreemvd khaanirgtf gyldpeyist rtftkksdvy
      301 sfgvllfeli agrnplqglm eyvelaamst eekdgweeia dsrldgkfdv qelnevaala
      361 ykcvnrvpkk rpsmrdivqv ltrilktrhi kkhqislsva tagevsvdle qgetkipitv
      421 hqrdesmdsa tdtfem
//
LOCUS       XP_016675954             430 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium/calmodulin-regulated receptor-like kinase 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016675954
VERSION     XP_016675954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..430
                     /product="calcium/calmodulin-regulated receptor-like
                     kinase 1 isoform X2"
                     /calculated_mol_wt=47588
     Region          118..378
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,194,236,238,
                     240..241,243,254,257,272..275)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,236,238,
                     240..241,243,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(122,192,194,236,238,240,257,272..275)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(253..259,266..268,271..275)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..430
                     /gene="LOC107895203"
                     /coded_by="XM_016820465.2:411..1703"
                     /db_xref="GeneID:107895203"
ORIGIN      
        1 mrgessglii gisigvvigv llaisalfci ryhrrrsqig nsssrrasti pirangadsc
       61 tilsdstigp dspvksgrng msvwiegfrr snvvsasgil eysykdlqka thnfttligq
      121 gafgpvykaq mstgetvavk vlatdskqge kefqtevmll grlhhrnlvn lvgycaekgq
      181 hmlvyvymsk gslashlyse nheplswnlr vyialdvarg leylhdgavp pvihrdikss
      241 nilldqsmra rvadfglsre emvdkhaani rgtfgyldpe yistrtftkk sdvysfgvll
      301 feliagrnpl qglmeyvela amsteekdgw eeiadsrldg kfdvqelnev aalaykcvnr
      361 vpkkrpsmrd ivqvltrilk trhikkhqis lsvatagevs vdleqgetki pitvhqrdes
      421 mdsatdtfem
//
LOCUS       XP_016675957             576 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 21 [Gossypium hirsutum].
ACCESSION   XP_016675957
VERSION     XP_016675957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820468.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..576
                     /product="scarecrow-like protein 21"
                     /calculated_mol_wt=64549
     Region          203..572
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..576
                     /gene="LOC107895204"
                     /coded_by="XM_016820468.1:264..1994"
                     /db_xref="GeneID:107895204"
ORIGIN      
        1 mdshqlfgls nstcystiss ipnrlfsssk sdirnspnsp fstkfdcyty ttpsdsqeqh
       61 sstdklsgls pssnsslqsn nyfyplsppl ncrgeslply sggssytqya nlshqmiyts
      121 qeldsalwap drdkevttps vsrpretgpl srtwsresqg slvlqpqtff vsrhrqsaea
      181 vhvekrqkai edlslhgipp gnlrqllfac akalfenkmd efdeliakak davsiagepi
      241 qrlgaymveg lvarkeasgs niyralrcre pegkellsym hmlyeicpyl kfgymaanga
      301 iaeacrnedh ihiidfqiaq gtqwvtllqa laarpggapr vritgiddpv skyargggle
      361 avgrrlsals ekfnipvefh gvpvfapdvt rdmlnlrpge alavnfplql hhtpdesvdv
      421 nnprdgilrl vkslspkvtt lveqesntnt apflprfiet leyylaifes idetlprdrk
      481 erinveqqcl ardivniiac egkerverhe llgkwksrlt magfrqypls syvnsvirsl
      541 lrcyskhytl vekdgamllr wkdrnlisas awhcnn
//
LOCUS       XP_016675958             555 aa            linear   PLN 06-AUG-2024
DEFINITION  (+)-delta-cadinene synthase isozyme A [Gossypium hirsutum].
ACCESSION   XP_016675958
VERSION     XP_016675958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="(+)-delta-cadinene synthase isozyme A"
                     /calculated_mol_wt=64023
     Region          21..552
                     /region_name="Terpene_cyclase_plant_C1"
                     /note="Plant Terpene Cyclases, Class 1; cd00684"
                     /db_xref="CDD:173832"
     Site            order(21..28,459..460,462..465,467..470,531..534)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     Site            order(271,280,301,303..305,308,312,383,449..450,452..453,
                     456,460,528,532,534)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173832"
     Site            order(308,312,452,456,460)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     Site            308..312
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173832"
     Site            452..460
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173832"
     CDS             1..555
                     /gene="LOC107895205"
                     /coded_by="XM_016820469.2:103..1770"
                     /db_xref="GeneID:107895205"
ORIGIN      
        1 masqaspvla sphpaissen rpkadfhpgi wgdmflncpd tdidaatelq yeefkaqvrk
       61 mimepvddsn qklpfidavq rlgvsyhfek eiedeleniy rdtnnndaen dlyttalrfr
      121 llrehgfdis cdafnkfkde agnfkpslts dvqgllelye asymrvhgee ildeaisftt
      181 aqltlalptl dhplseqvgh alkqsirrgl prvearnfis iyqdleshnk sllqfakidf
      241 nllqllhrke lseicrwwkd ldftrklpfa rdrvvegyfw imgvyfepqy slgrkmltkv
      301 iamasivddt ydsyatydel ipytnaiqrw dikcmnqlpd ymkisykall dvyeemeqll
      361 anqgrqyrve yakkamirla qaylleakwt hqnykptfee frdnalptsg yamlaitafv
      421 gmgevitpet fkwaandpki ikastiicrf mddiaehkfn hrreddcsai ecymeqygvt
      481 aqeaynefnk hiesswkdvn eeflkptemp tpvlcrslnl arvmdvlyre gdgythvgka
      541 akggitslli dpiqi
//
LOCUS       XP_016675959             555 aa            linear   PLN 06-AUG-2024
DEFINITION  (+)-delta-cadinene synthase isozyme A [Gossypium hirsutum].
ACCESSION   XP_016675959
VERSION     XP_016675959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="(+)-delta-cadinene synthase isozyme A"
                     /calculated_mol_wt=64023
     Region          21..552
                     /region_name="Terpene_cyclase_plant_C1"
                     /note="Plant Terpene Cyclases, Class 1; cd00684"
                     /db_xref="CDD:173832"
     Site            order(21..28,459..460,462..465,467..470,531..534)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     Site            order(271,280,301,303..305,308,312,383,449..450,452..453,
                     456,460,528,532,534)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173832"
     Site            order(308,312,452,456,460)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     Site            308..312
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173832"
     Site            452..460
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173832"
     CDS             1..555
                     /gene="LOC107895206"
                     /coded_by="XM_016820470.2:103..1770"
                     /db_xref="GeneID:107895206"
ORIGIN      
        1 masqaspvla sphpaissen rpkadfhpgi wgdmflncpd tdidaatelq yeefkaqvrk
       61 mimepvddsn qklpfidavq rlgvsyhfek eiedeleniy rdtnnndaen dlyttalrfr
      121 llrehgfdis cdafnkfkde agnfkpslts dvqgllelye asymrvhgee ildeaisftt
      181 aqltlalptl dhplseqvgh alkqsirrgl prvearnfis iyqdleshnk sllqfakidf
      241 nllqllhrke lseicrwwkd ldftrklpfa rdrvvegyfw imgvyfepqy slgrkmltkv
      301 iamasivddt ydsyatydel ipytnaiqrw dikcmnqlpd ymkisykall dvyeemeqll
      361 anqgrqyrve yakkamirla qaylleakwt hqnykptfee frdnalptsg yamlaitafv
      421 gmgevitpet fkwaandpki ikastiicrf mddiaehkfn hrreddcsai ecymeqygvt
      481 aqeaynefnk hiesswkdvn eeflkptemp tpvlcrslnl arvmdvlyre gdgythvgka
      541 akggitslli dpiqi
//
LOCUS       XP_040941271             536 aa            linear   PLN 06-AUG-2024
DEFINITION  organic cation/carnitine transporter 4 [Gossypium hirsutum].
ACCESSION   XP_040941271
VERSION     XP_040941271.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085337.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="organic cation/carnitine transporter 4"
                     /calculated_mol_wt=57340
     Region          103..512
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(119..120,123..124,127,151,202..203,205..207,210,226,
                     229..230,233,354,357..358,361..363,366,386,390,443..444,
                     448,452,468,471..472,475..476,479)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..536
                     /gene="LOC107894374"
                     /coded_by="XM_041085337.1:75..1685"
                     /db_xref="GeneID:107894374"
ORIGIN      
        1 mataggsetc shgsslessl llptkepnwe aipesesekl ciddmldvyc gefgswqlrh
       61 fvltslawal eafhtmvmif adqepgwrcv egsgsrcdek aesvcglepg sweweggpgs
      121 stvaqwglvc gekykvglvq alffagcmig agvfghlsds slgrkgslkt vcilnaifgc
      181 ltsiapdyft ylllrfltgf stggvglcsf vlatepvgpt krgvagmstf yffstgiall
      241 agiayifptw ralyvassvp svlflflvip fisesprwyl vrgkinkamk imqaiaksng
      301 nnlpegiila lddeandasn dnqssskeav sgsivdvirs pvtsirlfla vgisftcsvv
      361 yyglslnvvn letnihlsvl lnavaempaf titavlldrf grkplaigtq wfsaifcltg
      421 svvgsvrmwe vikmgcgvlg ifgmagtynl lfiytaelfp tvvrnaalgs atqaaqmgai
      481 lapfvvvlgg ilpflvfgic glvggmlayc lpetlnkply dtmrgieege adwrit
//
LOCUS       XP_016675960             513 aa            linear   PLN 06-AUG-2024
DEFINITION  putative beta-glucosidase 41 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675960
VERSION     XP_016675960.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820471.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675960.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..513
                     /product="putative beta-glucosidase 41 isoform X1"
                     /calculated_mol_wt=58713
     Region          32..505
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..513
                     /gene="LOC107895207"
                     /coded_by="XM_016820471.2:235..1776"
                     /db_xref="GeneID:107895207"
ORIGIN      
        1 masfiwvmsl lvllfitrev llvsssaqtv drddfpdgfi fgtassayqy egavnegnkg
       61 dsiwdtftrk pgkimdfsna dttvdqyhrf esdielmkdl vmdayrfsis wprifpygtg
      121 epnieginyy nclidalikk giqplvtlyh wdlpqiledk yqgwlskqiv ddfehyaitc
      181 fqafgdrvkh wvtfnephgf siqgydngiq apgrcsilgg llcnsgnsst epyivahnil
      241 lshaaayhsy rryfkekqgg qigialdakw yepisdkded kdaanraldf gigwfldplf
      301 fgdypgsmrk lvgerlpqis petskllvgv fdfiginhyt tyyarndrtq irklilqdas
      361 sdaavittsf regaaigeka asrwlrivpw girklarylk dkygnppvmi tengmddlns
      421 pfisikralk dvkrieyhrd ylsnlsaair edkcdvrgyf vwslldnwew nsgytvrfgl
      481 yyvdyknnlt ripkasvqwf ksflrprthv sti
//
LOCUS       XP_040941272             483 aa            linear   PLN 06-AUG-2024
DEFINITION  putative beta-glucosidase 41 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941272
VERSION     XP_040941272.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085338.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..483
                     /product="putative beta-glucosidase 41 isoform X2"
                     /calculated_mol_wt=55115
     Region          32..475
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..483
                     /gene="LOC107895207"
                     /coded_by="XM_041085338.1:227..1678"
                     /db_xref="GeneID:107895207"
ORIGIN      
        1 masfiwvmsl lvllfitrev llvsssaqtv drddfpdgfi fgtassayqy egavnegnkg
       61 dsiwdtftrk pgkimdfsna dttvdqyhrf esdielmkdl vmdayrfsis wprifpygtg
      121 epnieginyy nclidalikk giqplvtlyh wdlpqiledk yqgwlskqiv ddfehyaitc
      181 fqafgdrvkh wvtfnephgf siqgydngiq apgrcsilgg llcnsgnsst epyivahnil
      241 lshaaayhsy rryfkekqgg qigialdakw yepisdkded kdaanraldf gigwfldplf
      301 fgdypgsmrk lvgerlpqis petsklldas sdaavittsf regaaigeka asrwlrivpw
      361 girklarylk dkygnppvmi tengmddlns pfisikralk dvkrieyhrd ylsnlsaair
      421 edkcdvrgyf vwslldnwew nsgytvrfgl yyvdyknnlt ripkasvqwf ksflrprthv
      481 sti
//
LOCUS       XP_016675961             372 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA cap guanine-N7 methyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016675961
VERSION     XP_016675961.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820472.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675961.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="mRNA cap guanine-N7 methyltransferase 1"
                     /calculated_mol_wt=42374
     Region          30..341
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(91..97,114..115,149..151,172)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..372
                     /gene="LOC107895209"
                     /coded_by="XM_016820472.2:286..1404"
                     /db_xref="GeneID:107895209"
ORIGIN      
        1 mkrgypgsps ssfgppqsrs khnpegdsqf ledestkifa rkvadhysar tnqtleerea
       61 spiihlkkln nwiksvliql yarrgdavld lacgkggdli kwdkakvgyy vgidiaegsi
      121 edcrtryngd adhhqrrkkf tfparlicgd cfevrldrvl addapfdics cqfamhysws
      181 teararrala nvsallrpgg tfigtmpdan vivkklreae glafgnsvyw irfdeeftdk
      241 kfkssspfgi kykfhlkdav dcpewivpfh vfkslaeeyd lelvfvknsh efvheymkkp
      301 eyielmrrlg algdgnqdqs tlspdeweaa ylylafvlkk rgqpdrtqan srkdkgqmqi
      361 akedilyins dd
//
LOCUS       XP_016675963             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675963
VERSION     XP_016675963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820474.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..316
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33172
     CDS             1..316
                     /gene="LOC107895210"
                     /coded_by="XM_016820474.2:249..1199"
                     /db_xref="GeneID:107895210"
ORIGIN      
        1 mgggamraaa kvagagtvnt glrggvqvap ssaeysvmrv aasrsassgi svsgggvssv
       61 sdmtaspnqm mswemvddwe faggieeevp taisgggepm prvlfggapt leeakeaasd
      121 lkdaldkayl sslnstddtr ssrssllsee tkdcvaydak atllpkpavq afkllnespa
      181 vqsmvasiaa dpnvwnavlh npaymdfigs hktnyifegn rsrqgcests vkieeyfkan
      241 egkevgnpfs eflenlkssv vevankatdf lqclftipia gmekenggln ylektigasl
      301 mglavmvimv vllkrv
//
LOCUS       XP_016676098             118 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-binding protein KRP1 [Gossypium hirsutum].
ACCESSION   XP_016676098
VERSION     XP_016676098.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820609.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..118
                     /product="calcium-binding protein KRP1"
                     /calculated_mol_wt=12569
     Region          47..100
                     /region_name="EF-hand_8"
                     /note="EF-hand domain pair; pfam13833"
                     /db_xref="CDD:404678"
     CDS             1..118
                     /gene="LOC107895300"
                     /coded_by="XM_016820609.2:274..630"
                     /db_xref="GeneID:107895300"
ORIGIN      
        1 makpsasasa npstgfedfl pimanklgge gligelcngf nllmdsekgv itfdslkkns
       61 allglqdlsd ddlrcmvkeg dfdgdgalnq mefcvlmfrl spelmeasgf fleeafat
//
LOCUS       XP_016676097             223 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS32 [Gossypium hirsutum].
ACCESSION   XP_016676097
VERSION     XP_016676097.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820608.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="universal stress protein PHOS32"
                     /calculated_mol_wt=24001
     Region          40..194
                     /region_name="USP_At3g01520-like"
                     /note="universal stress protein At3g01520 and similar
                     proteins; cd23659"
                     /db_xref="CDD:467505"
     CDS             1..223
                     /gene="LOC107895299"
                     /coded_by="XM_016820608.2:327..998"
                     /db_xref="GeneID:107895299"
ORIGIN      
        1 mnpadntdhp qlptikihhp ssphhptsaa tptptsgarr kigvavdlsd esafavrwav
       61 qnylrpgdav illhvsptsv lfgadwgplp qtpqnpetpq sqkqleddfd aftaskaadl
      121 akplkeagih fkihivkdhd mrerlcleve rlglsavimg srgfgaekrg sdgrlgsvsd
      181 ycvhhcvcpv ivvrypedkd ggdaapvvnv ketevvekdg kda
//
LOCUS       XP_016675475             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675475
VERSION     XP_016675475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819986.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29776
     Region          45..253
                     /region_name="DUF1223"
                     /note="Protein of unknown function (DUF1223); pfam06764"
                     /db_xref="CDD:429108"
     CDS             1..273
                     /gene="LOC107894760"
                     /coded_by="XM_016819986.2:147..968"
                     /db_xref="GeneID:107894760"
ORIGIN      
        1 mgrrlfgcfg kgssssssgn evdgngktnn dtvveeaape spimvelfss qgcatspaae
       61 lllsrlgrgd fqldapvvvl ayhvdywdym gwkdpygssq wtvrqkayve tlnldtmftp
      121 qvvvqgraqc vpndedvlls tiataprfpa psfqaniqrp tsetlqvtit galrfkvedn
      181 gvhvmvalye nglvndcsag enkgkvlsnd fvvrkleklc nvedtsakkt isgtvtfslw
      241 dnfnhnkyai avfaensshq ifgsqkfqlp ddi
//
LOCUS       XP_016676093             451 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676093
VERSION     XP_016676093.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820604.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..451
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=49428
     CDS             1..451
                     /gene="LOC107895298"
                     /coded_by="XM_016820604.2:233..1588"
                     /db_xref="GeneID:107895298"
ORIGIN      
        1 malknqkdhw afleeieapm wvdlisetnf ssqdiddkwf qtshlfhqcs ssqlksafsc
       61 sgeegvtlel dlvgaysptl pqsvsrsrgk dfrskkwkgn ccdiswnkie smkvlkgksl
      121 vygegikpkl nfinskgtsr sktnlvseit enakgknvkp vsnrggpers lspvvdklge
      181 tngrstvtse siqqqqqqkf fevssrgfgq tselltsvrs slrkscitrp gsrveinadr
      241 shrmesrdsr sssgkssvgs ssysgyeakr stvswikrke ktpdsrnvar pteaaktkvk
      301 psnmckksnv rgkegernsr tgglvtvtki tweeavkska nsqthrskls llhkvneqkp
      361 ladarkasek vgvgnkvrdt gkennageip lsqkcngkgk aaegivarkk gatqstsamg
      421 gktgmvvpkg rvvnqregkn ptnsipkvhf r
//
LOCUS       XP_016676094             451 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676094
VERSION     XP_016676094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820605.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..451
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=49428
     CDS             1..451
                     /gene="LOC107895298"
                     /coded_by="XM_016820605.2:233..1588"
                     /db_xref="GeneID:107895298"
ORIGIN      
        1 malknqkdhw afleeieapm wvdlisetnf ssqdiddkwf qtshlfhqcs ssqlksafsc
       61 sgeegvtlel dlvgaysptl pqsvsrsrgk dfrskkwkgn ccdiswnkie smkvlkgksl
      121 vygegikpkl nfinskgtsr sktnlvseit enakgknvkp vsnrggpers lspvvdklge
      181 tngrstvtse siqqqqqqkf fevssrgfgq tselltsvrs slrkscitrp gsrveinadr
      241 shrmesrdsr sssgkssvgs ssysgyeakr stvswikrke ktpdsrnvar pteaaktkvk
      301 psnmckksnv rgkegernsr tgglvtvtki tweeavkska nsqthrskls llhkvneqkp
      361 ladarkasek vgvgnkvrdt gkennageip lsqkcngkgk aaegivarkk gatqstsamg
      421 gktgmvvpkg rvvnqregkn ptnsipkvhf r
//
LOCUS       XP_016676096             427 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676096
VERSION     XP_016676096.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820607.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..427
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=46676
     CDS             1..427
                     /gene="LOC107895298"
                     /coded_by="XM_016820607.2:237..1520"
                     /db_xref="GeneID:107895298"
ORIGIN      
        1 malknqkdhw afleeieapm wvdlisetnf ssqdiddkwf qtshlfhqcs ssqlksafsc
       61 sgeegvtlel dlvgaysptl pqsvsrsrgk dfrskkwkgn ccdiswnkie smkvlkgksl
      121 vygegikpkl nfinskgtsr sktnlvseit enakgknvkp vsnrggpers lspvvdklge
      181 tngrstvtse siqqqqqqkf fevssrgfgq tselltsvrs slrkscitrp gsrveinadr
      241 shrmesrdsr sssgkssvgs ssysgyeakr stvswikrke ktpdsrnvar pteaaktkvk
      301 psnmckksnv rgkegernsr tgglvtvtki tweeavkska nsqthrskls llhkvneqkp
      361 ladarkasek vgvgnkvrdt gkennageip lsqkcngkgk aaegivarkk gatqstsamg
      421 gktgksc
//
LOCUS       XP_016676090            1118 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676090
VERSION     XP_016676090.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820601.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1118
                     /product="myosin-2 isoform X1"
                     /calculated_mol_wt=126336
     Region          195..835
                     /region_name="MYSc_Myo8"
                     /note="class VIII myosin, motor domain; cd01383"
                     /db_xref="CDD:276834"
     Site            order(222..230,272..279,316..326,545..550)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276834"
     Site            222..230
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276834"
     Site            272..279
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276834"
     Site            316..326
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276834"
     Site            545..550
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276834"
     Site            order(574..585,588..597)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276834"
     Site            769..778
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276834"
     Site            order(781..798,805..835)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276834"
     Region          915..>1082
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..1118
                     /gene="LOC107895297"
                     /coded_by="XM_016820601.2:268..3624"
                     /db_xref="GeneID:107895297"
ORIGIN      
        1 mlspttlars sleemleslr lrdnsdrpkd lppalpsrpp srarirsgrw saqpnfntds
       61 nsesggegqr kenelrvkrn tfwnkkrrkd vnvnspynvv avegiegeer meekgilegs
      121 dnigyfiekk lrvwcrqsng vwvsgtihst sgeesfvsla ngnvvkvstc hlfpanpeil
      181 dgvddlmhls ylneptvfhn lkyrysrdmi yskagpilia vnpfkdvqin gkdivttykq
      241 katdkphvfa iaenaynemm ndgvnqslmi sgesgagkte takfavqyla algggnvgid
      301 cqilqtscil eafgnsktsm ndnssrfgkf ieihftaagk icgskirtfl leksrvvqla
      361 agersyhify qlcagapqal rerlnlkmak eynylaqsdc lvingvddaq rflkfmetld
      421 ifqiskgeqd qafamlaavl wlgnisfhai dyenhveasn dealinaarm igceshelke
      481 alsarriqte egnivekftm sqaidtrdal akfiyaslfd wlveqinnll evgkqhtgws
      541 isildiygfe sfkknsfeqf cinyanerlq qhfnrhvfkl eqeeyeldgi dgvkvdfadn
      601 qecldlfekk pigllsllde dlhspdanda tlanklkqnl ngmacfkgdk grvfgvrhfa
      661 gevlyntndf lkknqdslnp eliellsscn gqlpqlfaik mlnqtlepat sldspnqsvs
      721 akfkgklfkl mqqlektkph ficcikpnrk qlpgmyeedl vsqqlrcsgv leavrmsrsg
      781 yptrmthqef adrygfllle tnespdplsi svavlkqfni lpgmyqigyt klylriglig
      841 vledrrkqvl qtgkytdean kgsafasqlh dgqltaiigl qsairgclvr khfsnphkli
      901 tlrskqklvr enseandipn eqssamaelq rrvvdaeasl gqkqqenatl qeqlqqyeak
      961 mkkmeeqlqq seakmkktee qlqqseakmk kteemlrkqt aplqaslaaa kksevsatae
     1021 vggrengvss lvkefeqqkq sfeddinktt qpasnmnsye elrklkrrfr awkkdykvrl
     1081 kettaivrkh rhqdsdktrk kwwpnrgkvl qncgksps
//
LOCUS       XP_016676091            1110 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676091
VERSION     XP_016676091.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820602.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1110
                     /product="myosin-2 isoform X2"
                     /calculated_mol_wt=125436
     Region          195..835
                     /region_name="MYSc_Myo8"
                     /note="class VIII myosin, motor domain; cd01383"
                     /db_xref="CDD:276834"
     Site            order(222..230,272..279,316..326,545..550)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276834"
     Site            222..230
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276834"
     Site            272..279
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276834"
     Site            316..326
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276834"
     Site            545..550
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276834"
     Site            order(574..585,588..597)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276834"
     Site            769..778
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276834"
     Site            order(781..798,805..835)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276834"
     Region          899..>1074
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..1110
                     /gene="LOC107895297"
                     /coded_by="XM_016820602.2:269..3601"
                     /db_xref="GeneID:107895297"
ORIGIN      
        1 mlspttlars sleemleslr lrdnsdrpkd lppalpsrpp srarirsgrw saqpnfntds
       61 nsesggegqr kenelrvkrn tfwnkkrrkd vnvnspynvv avegiegeer meekgilegs
      121 dnigyfiekk lrvwcrqsng vwvsgtihst sgeesfvsla ngnvvkvstc hlfpanpeil
      181 dgvddlmhls ylneptvfhn lkyrysrdmi yskagpilia vnpfkdvqin gkdivttykq
      241 katdkphvfa iaenaynemm ndgvnqslmi sgesgagkte takfavqyla algggnvgid
      301 cqilqtscil eafgnsktsm ndnssrfgkf ieihftaagk icgskirtfl leksrvvqla
      361 agersyhify qlcagapqal rerlnlkmak eynylaqsdc lvingvddaq rflkfmetld
      421 ifqiskgeqd qafamlaavl wlgnisfhai dyenhveasn dealinaarm igceshelke
      481 alsarriqte egnivekftm sqaidtrdal akfiyaslfd wlveqinnll evgkqhtgws
      541 isildiygfe sfkknsfeqf cinyanerlq qhfnrhvfkl eqeeyeldgi dgvkvdfadn
      601 qecldlfekk pigllsllde dlhspdanda tlanklkqnl ngmacfkgdk grvfgvrhfa
      661 gevlyntndf lkknqdslnp eliellsscn gqlpqlfaik mlnqtlepat sldspnqsvs
      721 akfkgklfkl mqqlektkph ficcikpnrk qlpgmyeedl vsqqlrcsgv leavrmsrsg
      781 yptrmthqef adrygfllle tnespdplsi svavlkqfni lpgmyqigyt klylriglig
      841 vledrrkqvl qtgkytdean kgsafasqlh dgqltaiigl qsairgclvr khfsnphkli
      901 tlrskqkldi pneqssamae lqrrvvdaea slgqkqqena tlqeqlqqye akmkkmeeql
      961 qqseakmkkt eeqlqqseak mkkteemlrk qtaplqasla aakksevsat aevggrengv
     1021 sslvkefeqq kqsfeddink ttqpasnmns yeelrklkrr frawkkdykv rlkettaivr
     1081 khrhqdsdkt rkkwwpnrgk vlqncgksps
//
LOCUS       XP_016676092            1070 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016676092
VERSION     XP_016676092.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820603.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1070
                     /product="myosin-2 isoform X3"
                     /calculated_mol_wt=120699
     Region          164..787
                     /region_name="MYSc_Myo8"
                     /note="class VIII myosin, motor domain; cd01383"
                     /db_xref="CDD:276834"
     Site            order(174..182,224..231,268..278,497..502)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276834"
     Site            174..182
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276834"
     Site            224..231
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276834"
     Site            268..278
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276834"
     Site            497..502
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276834"
     Site            order(526..537,540..549)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276834"
     Site            721..730
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276834"
     Site            order(733..750,757..787)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276834"
     Region          867..>1034
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..1070
                     /gene="LOC107895297"
                     /coded_by="XM_016820603.2:268..3480"
                     /db_xref="GeneID:107895297"
ORIGIN      
        1 mlspttlars sleemleslr lrdnsdrpkd lppalpsrpp srarirsgrw saqpnfntds
       61 nsesggegqr kenelrvkrn tfwnkkrrkd vnvnspynvv avegiegeer meekgilegs
      121 dnigyfiekk lrvwcrqsng vwvsgtihst sgeesfvsla ngnskagpil iavnpfkdvq
      181 ingkdivtty kqkatdkphv faiaenayne mmndgvnqsl misgesgagk tetakfavqy
      241 laalgggnvg idcqilqtsc ileafgnskt smndnssrfg kfieihftaa gkicgskirt
      301 flleksrvvq laagersyhi fyqlcagapq alrerlnlkm akeynylaqs dclvingvdd
      361 aqrflkfmet ldifqiskge qdqafamlaa vlwlgnisfh aidyenhvea sndealinaa
      421 rmigceshel kealsarriq teegnivekf tmsqaidtrd alakfiyasl fdwlveqinn
      481 llevgkqhtg wsisildiyg fesfkknsfe qfcinyaner lqqhfnrhvf kleqeeyeld
      541 gidgvkvdfa dnqecldlfe kkpigllsll dedlhspdan datlanklkq nlngmacfkg
      601 dkgrvfgvrh fagevlyntn dflkknqdsl npeliellss cngqlpqlfa ikmlnqtlep
      661 atsldspnqs vsakfkgklf klmqqlektk phficcikpn rkqlpgmyee dlvsqqlrcs
      721 gvleavrmsr sgyptrmthq efadrygfll letnespdpl sisvavlkqf nilpgmyqig
      781 ytklylrigl igvledrrkq vlqtgkytde ankgsafasq lhdgqltaii glqsairgcl
      841 vrkhfsnphk litlrskqkl vrenseandi pneqssamae lqrrvvdaea slgqkqqena
      901 tlqeqlqqye akmkkmeeql qqseakmkkt eeqlqqseak mkkteemlrk qtaplqasla
      961 aakksevsat aevggrengv sslvkefeqq kqsfeddink ttqpasnmns yeelrklkrr
     1021 frawkkdykv rlkettaivr khrhqdsdkt rkkwwpnrgk vlqncgksps
//
LOCUS       XP_016676087             537 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016676087
VERSION     XP_016676087.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820598.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..537
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD5 isoform X1"
                     /calculated_mol_wt=57769
     Region          19..117
                     /region_name="ArfGap"
                     /note="GTPase-activating protein (GAP) for the ADP
                     ribosylation factors (ARFs); cd08204"
                     /db_xref="CDD:350058"
     Site            order(31,34,51,54,59)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350058"
     Site            order(31,34,51,54)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350058"
     CDS             1..537
                     /gene="LOC107895295"
                     /coded_by="XM_016820598.2:307..1920"
                     /db_xref="GeneID:107895295"
ORIGIN      
        1 mnekahvske lnekhrkile gllkipenke cadckskgpr wasvnlgvfi cmqcsgihrs
       61 lgvhiskvrs atldtwlpeq vafiqsmgne kansyweael pphydrvgie nfirakyeek
      121 rwiprnrrsk spprgldera tshwqrptek sghghvsnsd nsfeerrtsq assrkenlpa
      181 trislpvppk gpnqvtpvre petvvavpve attpppvtpp kfeyamdlfn mmsmddasse
      241 nasgsgaast ddndwagfqs agdtsatgqn dppkageknt rsatgieklf ndsppittnq
      301 vtekpqkdik ddimslfens nmpspfamhq qqlaalaqqq sllmaaaaks asgnaqqsps
      361 ngtmiptqqq lamlaqqqsl lmaaaakaap gngqqppstt tslptqqqla llahqqsllm
      421 aaaagnmqqp pststsvptq awpnigyqip gmmmpvgaqa dlqklmqtmq igqtqqtgnn
      481 vasssfyalg qgtpasgvat ngaskpqsas pvsstnssqa gkdydfsslt qgmftkr
//
LOCUS       XP_040941273             510 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941273
VERSION     XP_040941273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085339.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..510
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD5 isoform X2"
                     /calculated_mol_wt=54976
     Region          <40..96
                     /region_name="ArfGap"
                     /note="Putative GTPase activating protein for Arf;
                     pfam01412"
                     /db_xref="CDD:460200"
     Region          41..>170
                     /region_name="COG5347"
                     /note="GTPase-activating protein that regulates ARFs
                     (ADP-ribosylation factors), involved in ARF-mediated
                     vesicular transport [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227651"
     CDS             1..510
                     /gene="LOC107895295"
                     /coded_by="XM_041085339.1:102..1634"
                     /db_xref="GeneID:107895295"
ORIGIN      
        1 mhamfwdpqk srgahikesv nrlsfmfpqs mfasyclllq vrsatldtwl peqvafiqsm
       61 gnekansywe aelpphydrv gienfiraky eekrwiprnr rskspprgld eratshwqrp
      121 teksghghvs nsdnsfeerr tsqassrken lpatrislpv ppkgpnqvtp vrepetvvav
      181 pveattpppv tppkfeyamd lfnmmsmdda ssenasgsga astddndwag fqsagdtsat
      241 gqndppkage kntrsatgie klfndsppit tnqvtekpqk dikddimslf ensnmpspfa
      301 mhqqqlaala qqqsllmaaa aksasgnaqq spsngtmipt qqqlamlaqq qsllmaaaak
      361 aapgngqqpp stttslptqq qlallahqqs llmaaaagnm qqppststsv ptqawpnigy
      421 qipgmmmpvg aqadlqklmq tmqigqtqqt gnnvasssfy algqgtpasg vatngaskpq
      481 saspvsstns sqagkdydfs sltqgmftkr
//
LOCUS       XP_040941274             348 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome c-type biogenesis ccda-like chloroplastic protein 2
            [Gossypium hirsutum].
ACCESSION   XP_040941274
VERSION     XP_040941274.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085340.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..348
                     /product="cytochrome c-type biogenesis ccda-like
                     chloroplastic protein 2"
                     /calculated_mol_wt=35773
     Region          130..337
                     /region_name="DsbD"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl21514"
                     /db_xref="CDD:473893"
     CDS             1..348
                     /gene="LOC107895296"
                     /coded_by="XM_041085340.1:187..1233"
                     /db_xref="GeneID:107895296"
ORIGIN      
        1 mtlvlnhsvt ssfsnffkis slknhprtyy gkytmainkp tgskdlcnei eslkftslvn
       61 tiavanlvai dsakalsedn ilegaaslyt ladgssgdwf ggllysagqq aneavqgqls
      121 alsftslavi fgaglvtsls pctlsvlplt lgyigafgsg kgrtevivns mafslglatt
      181 lallgigasf agkaygqigq glplaasgla vimglnllev ielqlpsffs nfdprtaaan
      241 lpsgvqayla gltfalaasp cstpvlatll gyvatskdpv iggsllltyt agyvapllla
      301 asfagalqnl lsfrkfsawi npvsgalllg ggvytfldrl fpattmam
//
LOCUS       XP_040941275             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941275
VERSION     XP_040941275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085341.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13921
     CDS             1..123
                     /gene="LOC107895293"
                     /coded_by="XM_041085341.1:69..440"
                     /db_xref="GeneID:107895293"
ORIGIN      
        1 mrtlfhgitl ptsptlppfl rvrtsflfim esfeqvkgng gvidqtmeda gatnprvlwk
       61 qmgyeektva vheemkrmnr lpatssyvth rmrvlnkilq llsiqrtasq eeelellfag
      121 lsl
//
LOCUS       XP_016676082             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676082
VERSION     XP_016676082.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820593.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13921
     CDS             1..123
                     /gene="LOC107895293"
                     /coded_by="XM_016820593.2:133..504"
                     /db_xref="GeneID:107895293"
ORIGIN      
        1 mrtlfhgitl ptsptlppfl rvrtsflfim esfeqvkgng gvidqtmeda gatnprvlwk
       61 qmgyeektva vheemkrmnr lpatssyvth rmrvlnkilq llsiqrtasq eeelellfag
      121 lsl
//
LOCUS       XP_016676083             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676083
VERSION     XP_016676083.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820594.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13921
     CDS             1..123
                     /gene="LOC107895293"
                     /coded_by="XM_016820594.2:69..440"
                     /db_xref="GeneID:107895293"
ORIGIN      
        1 mrtlfhgitl ptsptlppfl rvrtsflfim esfeqvkgng gvidqtmeda gatnprvlwk
       61 qmgyeektva vheemkrmnr lpatssyvth rmrvlnkilq llsiqrtasq eeelellfag
      121 lsl
//
LOCUS       XP_016676084             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676084
VERSION     XP_016676084.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820595.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13921
     CDS             1..123
                     /gene="LOC107895293"
                     /coded_by="XM_016820595.2:69..440"
                     /db_xref="GeneID:107895293"
ORIGIN      
        1 mrtlfhgitl ptsptlppfl rvrtsflfim esfeqvkgng gvidqtmeda gatnprvlwk
       61 qmgyeektva vheemkrmnr lpatssyvth rmrvlnkilq llsiqrtasq eeelellfag
      121 lsl
//
LOCUS       XP_016676085             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676085
VERSION     XP_016676085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820596.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13921
     CDS             1..123
                     /gene="LOC107895293"
                     /coded_by="XM_016820596.2:69..440"
                     /db_xref="GeneID:107895293"
ORIGIN      
        1 mrtlfhgitl ptsptlppfl rvrtsflfim esfeqvkgng gvidqtmeda gatnprvlwk
       61 qmgyeektva vheemkrmnr lpatssyvth rmrvlnkilq llsiqrtasq eeelellfag
      121 lsl
//
LOCUS       XP_016676086             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676086
VERSION     XP_016676086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820597.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13921
     CDS             1..123
                     /gene="LOC107895293"
                     /coded_by="XM_016820597.2:69..440"
                     /db_xref="GeneID:107895293"
ORIGIN      
        1 mrtlfhgitl ptsptlppfl rvrtsflfim esfeqvkgng gvidqtmeda gatnprvlwk
       61 qmgyeektva vheemkrmnr lpatssyvth rmrvlnkilq llsiqrtasq eeelellfag
      121 lsl
//
LOCUS       XP_016676078             750 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: lysine-specific histone demethylase 1 homolog
            2-like [Gossypium hirsutum].
ACCESSION   XP_016676078
VERSION     XP_016676078.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820589.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676078.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..750
                     /product="LOW QUALITY PROTEIN: lysine-specific histone
                     demethylase 1 homolog 2-like"
                     /calculated_mol_wt=83228
     Region          1..744
                     /region_name="PLN02529"
                     /note="lysine-specific histone demethylase 1"
                     /db_xref="CDD:178144"
     CDS             1..750
                     /gene="LOC107895290"
                     /coded_by="XM_016820589.2:279..2531"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107895290"
ORIGIN      
        1 metpvseglv skrslrkksa vknydenlmd efiekhiggs frkirtkeel eketeteami
       61 alslgfpida liedeikagv vrdiggkeqn dyivlrnhil srwrsnvriw lskghiretv
      121 sneyehllsa aydfllyngy infgvspsfs syipaeateg sviivgagla glaaarqlix
      181 fgfkvvvieg rnrpggrvyt qlmgkkdkrg avdlggsvit gihanplgvl arqlsiplhk
      241 vrdncplykp dgvpvnkvid sktemifnkl ldkvnelrki mggfanyisl gsvleklrql
      301 ygvarspeer qllewhlanl eyanagclsd lsaaywdqdd pyemggdhcf laggnwrlik
      361 alcdgvpiiy gktvdairyg vegvevvtgk qafqadmvlc tvplgvlkrr tirfepelpq
      421 rklaaidrlg fgllnkvami fshvfwgeel dtfgclndts dnrgefflfy syhtvsggpv
      481 lialvagkaa qtfertdpsl llhrvlsklr giygpkgvdv pdpiqtictr wgndpfsygs
      541 yshvrvqssg rdydilaesi gnrlffagea ttrqypatmh gaylsglrea srilratrgr
      601 qnyfrrsvqr nvgpssdqlg dlfkrpdlvf gkfsfvfnpl tedpkslgll ritfdncted
      661 trkvlekscd pqsnqslqly talsreqahe lqmvtgedes klvylinnig lklmganalg
      721 itynslvtsi ssarkgrsry cisapllntv
//
LOCUS       XP_016676079             558 aa            linear   PLN 06-AUG-2024
DEFINITION  monodehydroascorbate reductase, seedling isozyme [Gossypium
            hirsutum].
ACCESSION   XP_016676079
VERSION     XP_016676079.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820590.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676079.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..558
                     /product="monodehydroascorbate reductase, seedling
                     isozyme"
                     /calculated_mol_wt=62075
     Region          148..520
                     /region_name="NirB"
                     /note="NAD(P)H-nitrite reductase, large subunit [Energy
                     production and conversion]; COG1251"
                     /db_xref="CDD:440863"
     CDS             1..558
                     /gene="LOC107895291"
                     /coded_by="XM_016820590.2:182..1858"
                     /db_xref="GeneID:107895291"
ORIGIN      
        1 massfnlvig sakfifapie rclnckrnfd enmkilqkll kelntvkevi elrlsaeihg
       61 gtmqteevkn wlddvqrikt eieiiehktk ekkflsrafl gktveekvfe lkaflrkgka
      121 flgmvksfky iivgggvaag yaarefdrqg lkpgqlaiis kesvapyerp tlskgylnpn
      181 pkaaarlpef hvcvgsggdr llpdwykekg iqlilgteiv kvnlalktlv saageifkfq
      241 tliiatgstv irltdfkveg adaknifylr eledadklve sikmkkhgka viigggyigl
      301 evaaamrind fdvtmvypdp wcmprlftpt iaafyesyye nkgikiikgt vsvgfnanan
      361 gevkgvklkd grvleadivv vgvgarplta lfkgqleedr ggiktdgffk tsmpgvyavg
      421 dvasfpikly netrrvehvd harksaehav kaikanetgk eleeydylpy fysrifelsw
      481 qfygdnvges lffrdnnpls pkpkfgsywi kdgkvvgafl eggtpeenka iakvsrlnpp
      541 venldqlkke glsfaskf
//
LOCUS       XP_016676080             558 aa            linear   PLN 06-AUG-2024
DEFINITION  monodehydroascorbate reductase, seedling isozyme [Gossypium
            hirsutum].
ACCESSION   XP_016676080
VERSION     XP_016676080.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820591.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676080.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..558
                     /product="monodehydroascorbate reductase, seedling
                     isozyme"
                     /calculated_mol_wt=62075
     Region          148..520
                     /region_name="NirB"
                     /note="NAD(P)H-nitrite reductase, large subunit [Energy
                     production and conversion]; COG1251"
                     /db_xref="CDD:440863"
     CDS             1..558
                     /gene="LOC107895291"
                     /coded_by="XM_016820591.2:175..1851"
                     /db_xref="GeneID:107895291"
ORIGIN      
        1 massfnlvig sakfifapie rclnckrnfd enmkilqkll kelntvkevi elrlsaeihg
       61 gtmqteevkn wlddvqrikt eieiiehktk ekkflsrafl gktveekvfe lkaflrkgka
      121 flgmvksfky iivgggvaag yaarefdrqg lkpgqlaiis kesvapyerp tlskgylnpn
      181 pkaaarlpef hvcvgsggdr llpdwykekg iqlilgteiv kvnlalktlv saageifkfq
      241 tliiatgstv irltdfkveg adaknifylr eledadklve sikmkkhgka viigggyigl
      301 evaaamrind fdvtmvypdp wcmprlftpt iaafyesyye nkgikiikgt vsvgfnanan
      361 gevkgvklkd grvleadivv vgvgarplta lfkgqleedr ggiktdgffk tsmpgvyavg
      421 dvasfpikly netrrvehvd harksaehav kaikanetgk eleeydylpy fysrifelsw
      481 qfygdnvges lffrdnnpls pkpkfgsywi kdgkvvgafl eggtpeenka iakvsrlnpp
      541 venldqlkke glsfaskf
//
LOCUS       XP_016676081             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676081
VERSION     XP_016676081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820592.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16907
     CDS             1..156
                     /gene="LOC107895292"
                     /coded_by="XM_016820592.2:85..555"
                     /db_xref="GeneID:107895292"
ORIGIN      
        1 mgiwdlisws tdsvkgfwqs scdhgstvit kgkevsvdal qkvnhhgsaa iskgkevlct
       61 alekvnhhls dpetrskisk vatdiaknat veglktipga yptykivsks isdddqkfks
      121 enkskkqeea lkalqatvsk lekevdvlre qaaskl
//
LOCUS       XP_016676075             691 aa            linear   PLN 06-AUG-2024
DEFINITION  H/ACA ribonucleoprotein complex non-core subunit NAF1 [Gossypium
            hirsutum].
ACCESSION   XP_016676075
VERSION     XP_016676075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820586.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..691
                     /product="H/ACA ribonucleoprotein complex non-core subunit
                     NAF1"
                     /calculated_mol_wt=75179
     Region          304..388
                     /region_name="Gar1"
                     /note="Gar1/Naf1 RNA binding region; pfam04410"
                     /db_xref="CDD:461296"
     CDS             1..691
                     /gene="LOC107895288"
                     /coded_by="XM_016820586.2:199..2274"
                     /db_xref="GeneID:107895288"
ORIGIN      
        1 mfsdnlkewf egfpdldrie leesvfadid nsmeigkedk fdkthvselg fngsesdfdg
       61 fkpivhgsal vegepgravk veedtskpes nlnlsieesk aedfdglkpi vcgsepvrge
      121 sgcmvkveee skpegnlslp ieevignvsl vdglesgsss sesdsecsss ssssssssdd
      181 dndedeeeeg edeeeedkek vkgeaknmdg adeleegeii gineevavdg tdsddddeee
      241 eedddeedgt deilsaldie ldevddeeed agalrgpiks knevevlpqv ppldvelqph
      301 hqmlpvgvvl svistkvive greqhnplne gsilwitadr splgfvdeif gpvknpyyvi
      361 rynsesevpa gihegtsisf vpefanhvln eknlhkkgyd asgendeels ddaefsddek
      421 eaeyrrmqkm tkramndqrv gnrksnkkkn kskngcwktg knssqqtstg mgqnqhnftt
      481 isaslvnhnc sssvmgeqnf vggsgfvppf svvpqssgii tpsngvwtng mpvrhpqnai
      541 fpnrisaegm sllsqnyqqq piplptpamp tmmpyqqqqf dpssntfpkl ilpggqsnlf
      601 aalasapwmg iagqngtfgm gmqgqqfnsa lqgistngpt mggncklqpd gvqgnfessq
      661 nfnmgasssr grkpyhrgrg rftggrghqr s
//
LOCUS       XP_040941276             321 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At3g07870 [Gossypium hirsutum].
ACCESSION   XP_040941276
VERSION     XP_040941276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085342.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="F-box protein At3g07870"
                     /calculated_mol_wt=37222
     Region          39..235
                     /region_name="F_box_assoc_1"
                     /note="F-box protein interaction domain; TIGR01640"
                     /db_xref="CDD:273726"
     CDS             1..321
                     /gene="LOC107895289"
                     /coded_by="XM_041085342.1:377..1342"
                     /db_xref="GeneID:107895289"
ORIGIN      
        1 mtgrheveys lhsddqefrk yaqleympfd nhhsivgacn gllclmdfqf sfdsifilcn
       61 piirksitlp kpclsslpyk isvgfgfdsa qndykllkit kkgvldkyve velyslkrnc
      121 wkilappkyd lysddfmvyv netvhwiaye rvnnegsysc kllilgfdmr ddvfkeimlp
      181 erlrnlphqs eiyvipydel ssiavielgs lhaecdiwvm kkygvvetwt kmyslgklgt
      241 epmprvlgfr kngdlmlrty nnlrlisrdp esneidyfgi qgrrtyvcny teslvlldrv
      301 iddamtenra nyasnanrst e
//
LOCUS       XP_016676069             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676069
VERSION     XP_016676069.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820580.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676069.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19239
     CDS             1..170
                     /gene="LOC107895286"
                     /coded_by="XM_016820580.2:466..978"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyyvcl slnvslvsie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffyrsvmpva
//
LOCUS       XP_040941277             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941277
VERSION     XP_040941277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085343.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19239
     CDS             1..170
                     /gene="LOC107895286"
                     /coded_by="XM_041085343.1:607..1119"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyyvcl slnvslvsie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffyrsvmpva
//
LOCUS       XP_016676070             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676070
VERSION     XP_016676070.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820581.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676070.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19239
     CDS             1..170
                     /gene="LOC107895286"
                     /coded_by="XM_016820581.2:479..991"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyyvcl slnvslvsie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffyrsvmpva
//
LOCUS       XP_040941278             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941278
VERSION     XP_040941278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085344.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19239
     CDS             1..170
                     /gene="LOC107895286"
                     /coded_by="XM_041085344.1:594..1106"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyyvcl slnvslvsie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffyrsvmpva
//
LOCUS       XP_016676071             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676071
VERSION     XP_016676071.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820582.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676071.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..170
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=19239
     CDS             1..170
                     /gene="LOC107895286"
                     /coded_by="XM_016820582.2:293..805"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyyvcl slnvslvsie wlashfncsm
      121 ylnvslasie laqvtielia vsiltcylrl vafcnllkgi ffyrsvmpva
//
LOCUS       XP_040941279             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941279
VERSION     XP_040941279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085345.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..162
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=18348
     CDS             1..162
                     /gene="LOC107895286"
                     /coded_by="XM_041085345.1:373..861"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 meqqnmepct pciykfgiqh dirssvrhtn illrgpilrt fginyftygf pepkgwsepl
       61 dflacsflle fplceslciw tscvcslyyv clslnvslvs iewlashfnc smylnvslas
      121 ielaqvtiel iavsiltcyl rlvafcnllk giffyrsvmp va
//
LOCUS       XP_040941280              98 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941280
VERSION     XP_040941280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085346.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X3"
                     /calculated_mol_wt=11212
     CDS             1..98
                     /gene="LOC107895286"
                     /coded_by="XM_041085346.1:479..775"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyya
//
LOCUS       XP_016676074              97 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_016676074
VERSION     XP_016676074.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820585.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..97
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X4"
                     /calculated_mol_wt=10779
     CDS             1..97
                     /gene="LOC107895286"
                     /coded_by="XM_016820585.2:450..743"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwseplgm imgaaastdk tctglqqvnq ealleln
//
LOCUS       XP_016676073              97 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_016676073
VERSION     XP_016676073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820584.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..97
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X5"
                     /calculated_mol_wt=11133
     CDS             1..97
                     /gene="LOC107895286"
                     /coded_by="XM_016820584.2:450..743"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpi
       61 sllalsfwsf hfaslyafgl layvryimhd hgcssfn
//
LOCUS       XP_016676072              98 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016676072
VERSION     XP_016676072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820583.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X3"
                     /calculated_mol_wt=11212
     CDS             1..98
                     /gene="LOC107895286"
                     /coded_by="XM_016820583.2:466..762"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyya
//
LOCUS       XP_040941281              98 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941281
VERSION     XP_040941281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085347.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X3"
                     /calculated_mol_wt=11212
     CDS             1..98
                     /gene="LOC107895286"
                     /coded_by="XM_041085347.1:647..943"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwsepldf lacsfllefp lceslciwts cvcslyya
//
LOCUS       XP_040941282              97 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040941282
VERSION     XP_040941282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085348.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..97
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X4"
                     /calculated_mol_wt=10779
     CDS             1..97
                     /gene="LOC107895286"
                     /coded_by="XM_041085348.1:293..586"
                     /db_xref="GeneID:107895286"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rssvrhtnil lrgpilrtfg inyftygfpe
       61 pkgwseplgm imgaaastdk tctglqqvnq ealleln
//
LOCUS       XP_016676068             527 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine 5'-monophosphate synthase [Gossypium hirsutum].
ACCESSION   XP_016676068
VERSION     XP_016676068.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676068.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..527
                     /product="uridine 5'-monophosphate synthase"
                     /calculated_mol_wt=57372
     Region          59..251
                     /region_name="PRTases_typeI"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     cl00309"
                     /db_xref="CDD:444823"
     Site            order(124,126,172..174,176..180,204)
                     /site_type="active"
                     /db_xref="CDD:206754"
     Region          295..514
                     /region_name="OMPdecase"
                     /note="Orotidine 5'-phosphate decarboxylase / HUMPS
                     family; pfam00215"
                     /db_xref="CDD:395160"
     Site            order(300,302,324,326,355,357,414..415,465,498..499)
                     /site_type="active"
                     /db_xref="CDD:240076"
     Site            order(326,328..329,356..357,359..360,363..364,367..368,
                     386..388,399,414,425,499)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:240076"
     CDS             1..527
                     /gene="LOC107895284"
                     /coded_by="XM_016820579.2:890..2473"
                     /db_xref="GeneID:107895284"
ORIGIN      
        1 miffyviirl spthtktyvn wlyffikhqs tlpfplpllh spapsalpva aattmssves
       61 lilqlheisa vkfgnfrlks gisspiyidl rliisypsll rqisqsllss lppqtpfnli
      121 cgvpytalpi atsisldtsi smlmrrkevk dygtaksieg vyekgqvcli vedlvtsgas
      181 vletaaplra lgikvtdavv vidreqggrq tleengiklh alftltqmvk vlrakgklea
      241 emetlvmkfl eetkkvavpk vekarvkslg feeraklakn ptgkklfevm vkkhsnlcla
      301 advgtaaell diaekvgpei cllkthvdif pdftpdfgsk lcliaerhnf mifedrkfad
      361 igntvtmqce ggifrildwa divnahvisg pgivdglklk glprgrglll laemssagnl
      421 akgdytaaav kiaeehsdfv igfisvnpas wsgapvnpaf iqatpgvqmv kggddlgqqy
      481 ntpysvifdr gsdiiivgrg iikaanpaea areyrlqgwe aykakcg
//
LOCUS       XP_016676067             349 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC transcription factor 56 [Gossypium hirsutum].
ACCESSION   XP_016676067
VERSION     XP_016676067.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676067.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..349
                     /product="NAC transcription factor 56"
                     /calculated_mol_wt=38772
     Region          16..142
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..349
                     /gene="LOC107895283"
                     /coded_by="XM_016820578.2:343..1392"
                     /db_xref="GeneID:107895283"
ORIGIN      
        1 mestdsstvs qrpnlppgfr fhptdeelvv hylkkkatsa plpvaiiaev dlykfdpwel
       61 pakatfgere wyffsprdrk ypngarpnra atsgywkatg tdkpvlnskg tqkvgvkkal
      121 vfyggkppkg iktnwimhey rlpdnknnnk ppgcdlgykk nslrlddwvl criykknntn
      181 rplgyekdea mddmggpvpt smsigslqfq tkgtscgtfl enhehnlfdg mlgsdgmnnn
      241 gsmshlgrcs sskpdlsmvn plkrstvpsl ywtdedtasp stsktfhgdh sndgslekpd
      301 tngsnsiatl lsqlpqtphl qqqtmvgsme dgifrpsyql pglnwytln
//
LOCUS       XP_016676064             546 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 18 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676064
VERSION     XP_016676064.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820575.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..546
                     /product="beta-glucosidase 18 isoform X1"
                     /calculated_mol_wt=62114
     Region          38..506
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..546
                     /gene="LOC107895281"
                     /coded_by="XM_016820575.2:137..1777"
                     /db_xref="GeneID:107895281"
ORIGIN      
        1 mpvnviihvs liffvvyllv sstsnaegfe iesqdvrrse fpdnflfgta vssyqveggy
       61 ledgkglsnw dvfthipgni knnengddad ddyhlfleda eiaqslgvna yrfsiswari
      121 lprgrfgevn pggikfynki idnlllrgie pfltihhfdl pqeledrygv wlsplmqddf
      181 lllaetcfks fgdrvkywtt inepnmfaem syvrglyppa hcsppfgncs vgnadiepli
      241 vvhnmllahg kavklyrerf qskqggsigl vvhlhmyepl rdvesdrqav nralaftggw
      301 vldplvfgdy ppemrqyhrs elprfsseet eymrgsidfi glnhystlya kdcihsrcvl
      361 ggdhfirgft fttgerdgil igeptgverf yvvprgmeki vdhvskrynn mpiyvtengy
      421 cpplteaapn llhdvnrinf yngylaalsr airkgadvrg yfawslmdnf ewaggysstf
      481 glyyvdrltm nrtpklsakw fqhflanrss arfnrqrfvn rtpksgrvrk skyiviattn
      541 anatdv
//
LOCUS       XP_016676065             514 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 18 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676065
VERSION     XP_016676065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820576.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..514
                     /product="beta-glucosidase 18 isoform X2"
                     /calculated_mol_wt=58567
     Region          24..474
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..514
                     /gene="LOC107895281"
                     /coded_by="XM_016820576.2:156..1700"
                     /db_xref="GeneID:107895281"
ORIGIN      
        1 mlkvlrskak mledlnsqtt fslveggyle dgkglsnwdv fthipgnikn nengddaddd
       61 yhlfledaei aqslgvnayr fsiswarilp rgrfgevnpg gikfynkiid nlllrgiepf
      121 ltihhfdlpq eledrygvwl splmqddfll laetcfksfg drvkywttin epnmfaemsy
      181 vrglyppahc sppfgncsvg nadieplivv hnmllahgka vklyrerfqs kqggsiglvv
      241 hlhmyeplrd vesdrqavnr alaftggwvl dplvfgdypp emrqyhrsel prfsseetey
      301 mrgsidfigl nhystlyakd cihsrcvlgg dhfirgftft tgerdgilig eptgverfyv
      361 vprgmekivd hvskrynnmp iyvtengycp plteaapnll hdvnrinfyn gylaalsrai
      421 rkgadvrgyf awslmdnfew aggysstfgl yyvdrltmnr tpklsakwfq hflanrssar
      481 fnrqrfvnrt pksgrvrksk yiviattnan atdv
//
LOCUS       XP_016676061             909 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 44 [Gossypium hirsutum].
ACCESSION   XP_016676061
VERSION     XP_016676061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820572.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..909
                     /product="WD repeat-containing protein 44"
                     /calculated_mol_wt=99757
     Region          430..753
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(436,454,458,464..465,479..480,500,526,535..536,
                     547..548,564,569,575..576,588,606,611,617..618,630..631,
                     648,652,658..659,680..681,701,704,721,724,742,746,
                     752..753)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          440..481
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          488..547
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          552..586
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          593..629
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          634..677
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          685..723
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          728..752
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..909
                     /gene="LOC107895279"
                     /coded_by="XM_016820572.2:321..3050"
                     /db_xref="GeneID:107895279"
ORIGIN      
        1 msknpirsnc sklndhdwtq vvevnqeaee eyfyhsldri assnscscsn saspssdsds
       61 dpiapsnnah hpfpvpkfpk vvsqfdiwis epssvserrt rllrdmglsr hpglsrirpg
      121 setevgdgre mgsgggggel grrsvssnrl vkeeledqdr grekessssg ivrsksdgdc
      181 saaavpsspl slrsnssssi lsvglctvnn nnnisecdqs naaaanlrrc gsngskppke
      241 riskslngel sfksfgdgea vvvddemdcs eqvctiknld ngeefvvnei redgmwnklk
      301 evgtgrqltm eefevcvghs pivqelmrrq nveegnkdna dlivsgggag vskskkkgsw
      361 fksiksvans vkgnkerrss derdtssekg grrsssatdd sqdvsfhgpe rvrvkqygks
      421 ckeltalyks qeiqahtgsi wsikfsldgk ylasagedcv ihiwkvvesd rkgellmekp
      481 edgnfnlllv angspepils spstdyppdk rrrgrssisr kslsldnivv petvfalsdk
      541 pvcsfqghld dvldlswsks qqllsssmdk tvrlwdltsk tclsifshsd yvtciqfnpv
      601 ddkyfisgsl dakvriwsip drkvvdwndl hemvtaacyt pdgqgalvgs ykgschlynt
      661 senklqpksq inlqnkrkks hqkkitgfqf apgsssevlv tsadsrirvv dssdlihkfk
      721 gfrntnsqis asvtangkyv vcasedsyvy vwkheagsrp srnkgvtmtq syehfhckdv
      781 svaipwpgtw glrdiqlddn idevstanhp ptpveeysgn egllsasgyt nsplhgtiss
      841 atnsyffdri satwpeeilv qvtrtwsspk tivdlsgvnq dtasgmvivt aglrgeirtf
      901 qnfglpfri
//
LOCUS       XP_016676060             399 aa            linear   PLN 06-AUG-2024
DEFINITION  protochlorophyllide reductase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016676060
VERSION     XP_016676060.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820571.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676060.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="protochlorophyllide reductase, chloroplastic"
                     /calculated_mol_wt=43444
     Region          91..397
                     /region_name="PLN00015"
                     /note="protochlorophyllide reductase"
                     /db_xref="CDD:177654"
     Site            order(93,95..98,118..120,143..145,171..173,195,230..232,
                     274,278,305..308,310..311)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187670"
     Site            order(196,232,274,278)
                     /site_type="active"
                     /db_xref="CDD:187670"
     CDS             1..399
                     /gene="LOC107895278"
                     /coded_by="XM_016820571.2:145..1344"
                     /db_xref="GeneID:107895278"
ORIGIN      
        1 malqtaalvp atftlpkegk sspsfkdstf fgvslsdhak adfsssalrc krefnprnga
       61 vraettatat paisrsavdg kktlrkdsvf itgassglgl atakalaetr kwhiimacrd
      121 flkaeraaks agmskqnyti lhldlaslds vrefvdgykr sgrpldvlvc naavyqpiak
      181 epsftaegfe lsvgtnhlgh fllsrllldd lkqsdypskr liivgsitgn tntlagnvpp
      241 kanlgnlrgl agglnglnss tmidgeefdg akaykdskvc nmltmqefhr rfheesgitf
      301 aslypgciam tdlfrehipl frllfpsfqk yitkgfvseh eagkrlaqvv sdpsltkssv
      361 ywswnqnsas fenqlspeas deekarkiwe lseklvgla
//
LOCUS       XP_040941284             584 aa            linear   PLN 06-AUG-2024
DEFINITION  plant intracellular Ras-group-related LRR protein 6 [Gossypium
            hirsutum].
ACCESSION   XP_040941284
VERSION     XP_040941284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085350.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..584
                     /product="plant intracellular Ras-group-related LRR
                     protein 6"
                     /calculated_mol_wt=63589
     Region          13..34
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          47..69
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <59..294
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          70..>550
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          70..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          139..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..360
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          361..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..429
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          430..453
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          454..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          478..500
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          501..523
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          524..547
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..584
                     /gene="LOC107895277"
                     /coded_by="XM_041085350.1:126..1880"
                     /db_xref="GeneID:107895277"
ORIGIN      
        1 mdrllkaara sgslnlsnrs lrdvpeeiyr sldavgegek wweavelqkl ilahnniesl
       61 keevrnlpll tvlnvshnkl tdlpagigql smlklldvsf nsivtipeei gsatslvkfd
      121 cssnhikelp sslgkcsdls dlkvsnnlit slpedltncl kltkldvegn kltalsenlf
      181 asctmlteln asknllsgip enigcltrli rldlhqnris sippsisgcs slaefymgnn
      241 alsilteelg alsrlgtldl hsnqlkeypv gtcklslsvl dlsnnsltgl paelgkmttl
      301 rkillsgnpl rtlrsslvsg ptsallrylr sqlseaedsg aqtpakeevv tmaarlslts
      361 kelslegmgl svvpseawes geiiklnlsk nsiqelpvel sscsslqtlv lssnnikdwp
      421 vailkslpnl sclkldsnpl rqipsdgfqa ismiqildis gnatslpenp afsnlphlke
      481 lylrrmqlre vpseimslcq lqilglsqns lqsipegfkn ltslteldls dnnistlppe
      541 lgllepslqv lrldgnplrs irrpildrgt kavlkylkdk lpeq
//
LOCUS       XP_016676058             174 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin [Gossypium hirsutum].
ACCESSION   XP_016676058
VERSION     XP_016676058.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820569.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..174
                     /product="thioredoxin"
                     /calculated_mol_wt=19200
     Region          74..174
                     /region_name="CnoX"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; COG3118"
                     /db_xref="CDD:442352"
     CDS             1..174
                     /gene="LOC107895276"
                     /coded_by="XM_016820569.2:193..717"
                     /db_xref="GeneID:107895276"
ORIGIN      
        1 masstvpigv avsapssvls nrrisvrfse frglkikprl asltqstrsa iqdrrrvgrv
       61 vceaqntavd vpaikdetwq slvlecelpv lvefwapwcg pcrmihpiid elskqyagkl
      121 kcykvntdes pniatrygir siptvmifkr gekkdaviga vpkstlttci erll
//
LOCUS       XP_040941285             570 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941285
VERSION     XP_040941285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085351.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..570
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64659
     Region          207..509
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..570
                     /gene="LOC107895272"
                     /coded_by="XM_041085351.1:446..2158"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mtggslglra gsygslpnik nviagggrll hsksfgsvrk npimmlsgtr ekersfpsiw
       61 yrylgrrkis mllmvalavl vfvlgsfvvn kesnspnvdq rigtmsmahy inatrtdasr
      121 ilgrrnrqkg gdgnrfqasv pkganhpcan ftfpppppph lrrigprpcp vcylpvdqai
      181 asmpsspses pvlhnltyvh denpikteph ggsdfggyps lkqrndsfdi kesmvvhcgf
      241 vkgskpghqt gfdfdksdla elqqfheiiv asaifgnydl iqqprnisee akrnvpfymf
      301 ideeteaymk nrsmldsskr vglwriivih nvpysdarrn gkvpklllhr ifpnirysiw
      361 idgklqlvvd pyqilerflw rqnanfaisr hyrrfdvfve aeankaagky dnssidaqvd
      421 fyrtegltpy seaklpiisd vpegcvlike hipitnlftc lwfnevdrft srdqlsfgiv
      481 rdkimakvdw hinmfldcer rnfviqayhr dllehmpppv avirrppalp niitrgrnqg
      541 kkiprhgrdr rsgsrrhhka sagnresnif
//
LOCUS       XP_040941286             570 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941286
VERSION     XP_040941286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085352.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..570
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64659
     Region          207..509
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..570
                     /gene="LOC107895272"
                     /coded_by="XM_041085352.1:490..2202"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mtggslglra gsygslpnik nviagggrll hsksfgsvrk npimmlsgtr ekersfpsiw
       61 yrylgrrkis mllmvalavl vfvlgsfvvn kesnspnvdq rigtmsmahy inatrtdasr
      121 ilgrrnrqkg gdgnrfqasv pkganhpcan ftfpppppph lrrigprpcp vcylpvdqai
      181 asmpsspses pvlhnltyvh denpikteph ggsdfggyps lkqrndsfdi kesmvvhcgf
      241 vkgskpghqt gfdfdksdla elqqfheiiv asaifgnydl iqqprnisee akrnvpfymf
      301 ideeteaymk nrsmldsskr vglwriivih nvpysdarrn gkvpklllhr ifpnirysiw
      361 idgklqlvvd pyqilerflw rqnanfaisr hyrrfdvfve aeankaagky dnssidaqvd
      421 fyrtegltpy seaklpiisd vpegcvlike hipitnlftc lwfnevdrft srdqlsfgiv
      481 rdkimakvdw hinmfldcer rnfviqayhr dllehmpppv avirrppalp niitrgrnqg
      541 kkiprhgrdr rsgsrrhhka sagnresnif
//
LOCUS       XP_040941287             570 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941287
VERSION     XP_040941287.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085353.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..570
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64659
     Region          207..509
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..570
                     /gene="LOC107895272"
                     /coded_by="XM_041085353.1:356..2068"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mtggslglra gsygslpnik nviagggrll hsksfgsvrk npimmlsgtr ekersfpsiw
       61 yrylgrrkis mllmvalavl vfvlgsfvvn kesnspnvdq rigtmsmahy inatrtdasr
      121 ilgrrnrqkg gdgnrfqasv pkganhpcan ftfpppppph lrrigprpcp vcylpvdqai
      181 asmpsspses pvlhnltyvh denpikteph ggsdfggyps lkqrndsfdi kesmvvhcgf
      241 vkgskpghqt gfdfdksdla elqqfheiiv asaifgnydl iqqprnisee akrnvpfymf
      301 ideeteaymk nrsmldsskr vglwriivih nvpysdarrn gkvpklllhr ifpnirysiw
      361 idgklqlvvd pyqilerflw rqnanfaisr hyrrfdvfve aeankaagky dnssidaqvd
      421 fyrtegltpy seaklpiisd vpegcvlike hipitnlftc lwfnevdrft srdqlsfgiv
      481 rdkimakvdw hinmfldcer rnfviqayhr dllehmpppv avirrppalp niitrgrnqg
      541 kkiprhgrdr rsgsrrhhka sagnresnif
//
LOCUS       XP_040941288             494 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941288
VERSION     XP_040941288.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085354.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..494
                     /product="probable hexosyltransferase MUCI70 isoform X2"
                     /calculated_mol_wt=56262
     Region          131..433
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..494
                     /gene="LOC107895272"
                     /coded_by="XM_041085354.1:446..1930"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mtggslglra gsygslpnik nviagggrll hsksfgsvrk npimmlsgtr ekersfpsiw
       61 yrylgrrkis mllmvalavl vfvlgsfvvn kacpvcylpv dqaiasmpss psespvlhnl
      121 tyvhdenpik tephggsdfg gypslkqrnd sfdikesmvv hcgfvkgskp ghqtgfdfdk
      181 sdlaelqqfh eiivasaifg nydliqqprn iseeakrnvp fymfideete aymknrsmld
      241 sskrvglwri ivihnvpysd arrngkvpkl llhrifpnir ysiwidgklq lvvdpyqile
      301 rflwrqnanf aisrhyrrfd vfveaeanka agkydnssid aqvdfyrteg ltpyseaklp
      361 iisdvpegcv likehipitn lftclwfnev drftsrdqls fgivrdkima kvdwhinmfl
      421 dcerrnfviq ayhrdllehm pppvavirrp palpniitrg rnqgkkiprh grdrrsgsrr
      481 hhkasagnre snif
//
LOCUS       XP_040941289             486 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941289
VERSION     XP_040941289.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085355.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="probable hexosyltransferase MUCI70 isoform X3"
                     /calculated_mol_wt=55575
     Region          123..425
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..486
                     /gene="LOC107895272"
                     /coded_by="XM_041085355.1:239..1699"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mievritesn spnvdqrigt msmahyinat rtdasrilgr rnrqkggdgn rfqasvpkga
       61 nhpcanftfp ppppphlrri gprpcpvcyl pvdqaiasmp sspsespvlh nltyvhdenp
      121 iktephggsd fggypslkqr ndsfdikesm vvhcgfvkgs kpghqtgfdf dksdlaelqq
      181 fheiivasai fgnydliqqp rniseeakrn vpfymfidee teaymknrsm ldsskrvglw
      241 riivihnvpy sdarrngkvp klllhrifpn irysiwidgk lqlvvdpyqi lerflwrqna
      301 nfaisrhyrr fdvfveaean kaagkydnss idaqvdfyrt egltpyseak lpiisdvpeg
      361 cvlikehipi tnlftclwfn evdrftsrdq lsfgivrdki makvdwhinm fldcerrnfv
      421 iqayhrdlle hmpppvavir rppalpniit rgrnqgkkip rhgrdrrsgs rrhhkasagn
      481 resnif
//
LOCUS       XP_040941290             486 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941290
VERSION     XP_040941290.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085356.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="probable hexosyltransferase MUCI70 isoform X3"
                     /calculated_mol_wt=55575
     Region          123..425
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..486
                     /gene="LOC107895272"
                     /coded_by="XM_041085356.1:223..1683"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mievritesn spnvdqrigt msmahyinat rtdasrilgr rnrqkggdgn rfqasvpkga
       61 nhpcanftfp ppppphlrri gprpcpvcyl pvdqaiasmp sspsespvlh nltyvhdenp
      121 iktephggsd fggypslkqr ndsfdikesm vvhcgfvkgs kpghqtgfdf dksdlaelqq
      181 fheiivasai fgnydliqqp rniseeakrn vpfymfidee teaymknrsm ldsskrvglw
      241 riivihnvpy sdarrngkvp klllhrifpn irysiwidgk lqlvvdpyqi lerflwrqna
      301 nfaisrhyrr fdvfveaean kaagkydnss idaqvdfyrt egltpyseak lpiisdvpeg
      361 cvlikehipi tnlftclwfn evdrftsrdq lsfgivrdki makvdwhinm fldcerrnfv
      421 iqayhrdlle hmpppvavir rppalpniit rgrnqgkkip rhgrdrrsgs rrhhkasagn
      481 resnif
//
LOCUS       XP_040941291             486 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941291
VERSION     XP_040941291.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085357.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="probable hexosyltransferase MUCI70 isoform X3"
                     /calculated_mol_wt=55575
     Region          123..425
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..486
                     /gene="LOC107895272"
                     /coded_by="XM_041085357.1:373..1833"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mievritesn spnvdqrigt msmahyinat rtdasrilgr rnrqkggdgn rfqasvpkga
       61 nhpcanftfp ppppphlrri gprpcpvcyl pvdqaiasmp sspsespvlh nltyvhdenp
      121 iktephggsd fggypslkqr ndsfdikesm vvhcgfvkgs kpghqtgfdf dksdlaelqq
      181 fheiivasai fgnydliqqp rniseeakrn vpfymfidee teaymknrsm ldsskrvglw
      241 riivihnvpy sdarrngkvp klllhrifpn irysiwidgk lqlvvdpyqi lerflwrqna
      301 nfaisrhyrr fdvfveaean kaagkydnss idaqvdfyrt egltpyseak lpiisdvpeg
      361 cvlikehipi tnlftclwfn evdrftsrdq lsfgivrdki makvdwhinm fldcerrnfv
      421 iqayhrdlle hmpppvavir rppalpniit rgrnqgkkip rhgrdrrsgs rrhhkasagn
      481 resnif
//
LOCUS       XP_040941292             483 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941292
VERSION     XP_040941292.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085358.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..483
                     /product="probable hexosyltransferase MUCI70 isoform X4"
                     /calculated_mol_wt=55271
     Region          120..422
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..483
                     /gene="LOC107895272"
                     /coded_by="XM_041085358.1:235..1686"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mhdresnspn vdqrigtmsm ahyinatrtd asrilgrrnr qkggdgnrfq asvpkganhp
       61 canftfpppp pphlrrigpr pcpvcylpvd qaiasmpssp sespvlhnlt yvhdenpikt
      121 ephggsdfgg ypslkqrnds fdikesmvvh cgfvkgskpg hqtgfdfdks dlaelqqfhe
      181 iivasaifgn ydliqqprni seeakrnvpf ymfideetea ymknrsmlds skrvglwrii
      241 vihnvpysda rrngkvpkll lhrifpniry siwidgklql vvdpyqiler flwrqnanfa
      301 isrhyrrfdv fveaeankaa gkydnssida qvdfyrtegl tpyseaklpi isdvpegcvl
      361 ikehipitnl ftclwfnevd rftsrdqlsf givrdkimak vdwhinmfld cerrnfviqa
      421 yhrdllehmp ppvavirrpp alpniitrgr nqgkkiprhg rdrrsgsrrh hkasagnres
      481 nif
//
LOCUS       XP_040941293             483 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941293
VERSION     XP_040941293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085359.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..483
                     /product="probable hexosyltransferase MUCI70 isoform X4"
                     /calculated_mol_wt=55271
     Region          120..422
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..483
                     /gene="LOC107895272"
                     /coded_by="XM_041085359.1:230..1681"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mhdresnspn vdqrigtmsm ahyinatrtd asrilgrrnr qkggdgnrfq asvpkganhp
       61 canftfpppp pphlrrigpr pcpvcylpvd qaiasmpssp sespvlhnlt yvhdenpikt
      121 ephggsdfgg ypslkqrnds fdikesmvvh cgfvkgskpg hqtgfdfdks dlaelqqfhe
      181 iivasaifgn ydliqqprni seeakrnvpf ymfideetea ymknrsmlds skrvglwrii
      241 vihnvpysda rrngkvpkll lhrifpniry siwidgklql vvdpyqiler flwrqnanfa
      301 isrhyrrfdv fveaeankaa gkydnssida qvdfyrtegl tpyseaklpi isdvpegcvl
      361 ikehipitnl ftclwfnevd rftsrdqlsf givrdkimak vdwhinmfld cerrnfviqa
      421 yhrdllehmp ppvavirrpp alpniitrgr nqgkkiprhg rdrrsgsrrh hkasagnres
      481 nif
//
LOCUS       XP_040941294             483 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941294
VERSION     XP_040941294.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085360.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..483
                     /product="probable hexosyltransferase MUCI70 isoform X4"
                     /calculated_mol_wt=55271
     Region          120..422
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..483
                     /gene="LOC107895272"
                     /coded_by="XM_041085360.1:283..1734"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mhdresnspn vdqrigtmsm ahyinatrtd asrilgrrnr qkggdgnrfq asvpkganhp
       61 canftfpppp pphlrrigpr pcpvcylpvd qaiasmpssp sespvlhnlt yvhdenpikt
      121 ephggsdfgg ypslkqrnds fdikesmvvh cgfvkgskpg hqtgfdfdks dlaelqqfhe
      181 iivasaifgn ydliqqprni seeakrnvpf ymfideetea ymknrsmlds skrvglwrii
      241 vihnvpysda rrngkvpkll lhrifpniry siwidgklql vvdpyqiler flwrqnanfa
      301 isrhyrrfdv fveaeankaa gkydnssida qvdfyrtegl tpyseaklpi isdvpegcvl
      361 ikehipitnl ftclwfnevd rftsrdqlsf givrdkimak vdwhinmfld cerrnfviqa
      421 yhrdllehmp ppvavirrpp alpniitrgr nqgkkiprhg rdrrsgsrrh hkasagnres
      481 nif
//
LOCUS       XP_040941295             457 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941295
VERSION     XP_040941295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085361.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..457
                     /product="probable hexosyltransferase MUCI70 isoform X5"
                     /calculated_mol_wt=52123
     Region          94..396
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..457
                     /gene="LOC107895272"
                     /coded_by="XM_041085361.1:336..1709"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mlhgslgggi grkegmeidf kllflkvqti hvrishsllp lllildglgl gvslacpvcy
       61 lpvdqaiasm psspsespvl hnltyvhden piktephggs dfggypslkq rndsfdikes
      121 mvvhcgfvkg skpghqtgfd fdksdlaelq qfheiivasa ifgnydliqq prniseeakr
      181 nvpfymfide eteaymknrs mldsskrvgl wriivihnvp ysdarrngkv pklllhrifp
      241 nirysiwidg klqlvvdpyq ilerflwrqn anfaisrhyr rfdvfveaea nkaagkydns
      301 sidaqvdfyr tegltpysea klpiisdvpe gcvlikehip itnlftclwf nevdrftsrd
      361 qlsfgivrdk imakvdwhin mfldcerrnf viqayhrdll ehmpppvavi rrppalpnii
      421 trgrnqgkki prhgrdrrsg srrhhkasag nresnif
//
LOCUS       XP_040941296             457 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941296
VERSION     XP_040941296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085362.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..457
                     /product="probable hexosyltransferase MUCI70 isoform X5"
                     /calculated_mol_wt=52123
     Region          94..396
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..457
                     /gene="LOC107895272"
                     /coded_by="XM_041085362.1:165..1538"
                     /db_xref="GeneID:107895272"
ORIGIN      
        1 mlhgslgggi grkegmeidf kllflkvqti hvrishsllp lllildglgl gvslacpvcy
       61 lpvdqaiasm psspsespvl hnltyvhden piktephggs dfggypslkq rndsfdikes
      121 mvvhcgfvkg skpghqtgfd fdksdlaelq qfheiivasa ifgnydliqq prniseeakr
      181 nvpfymfide eteaymknrs mldsskrvgl wriivihnvp ysdarrngkv pklllhrifp
      241 nirysiwidg klqlvvdpyq ilerflwrqn anfaisrhyr rfdvfveaea nkaagkydns
      301 sidaqvdfyr tegltpysea klpiisdvpe gcvlikehip itnlftclwf nevdrftsrd
      361 qlsfgivrdk imakvdwhin mfldcerrnf viqayhrdll ehmpppvavi rrppalpnii
      421 trgrnqgkki prhgrdrrsg srrhhkasag nresnif
//
LOCUS       XP_040941297             716 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase At1g54610 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941297
VERSION     XP_040941297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085363.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..716
                     /product="probable serine/threonine-protein kinase
                     At1g54610 isoform X1"
                     /calculated_mol_wt=79762
     Region          142..424
                     /region_name="STKc_CDK9_like"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; cd07840"
                     /db_xref="CDD:270832"
     Site            order(146..149,154,167,169,186,200,218..221,224,226..227,
                     264,266,268..269,271,282,285,298,300..303,305,343..344)
                     /site_type="active"
                     /db_xref="CDD:270832"
     Site            order(146..149,154,167,169,200,218..221,224,227,268..269,
                     271,282)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270832"
     Site            order(178..180,182,185,189,192,202..205,207,214)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270832"
     Site            order(186,226,264,266,285,298,300..303,305,343..344)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270832"
     Site            order(281..292,297..305)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270832"
     CDS             1..716
                     /gene="LOC107895270"
                     /coded_by="XM_041085363.1:860..3010"
                     /db_xref="GeneID:107895270"
ORIGIN      
        1 mgcicckpsa iedskqspts kvsldvrvsm atsskredsq rtkdrygnse grtmlidkqv
       61 ngsvrihgen ldrkrekvec vvrqhpgrgs vpkaiegeqv aagwpawlaa vageaiqgwi
      121 prpadsfekl dkmcnwesgt mklkkigqgt ysnvyrardl dqkkvvalkk vrfdnlepes
      181 vrfmareihi lrrldhpnvi kleglvtsrm scslylvfey mehdlaglas npglkfsepq
      241 vkcymqqllc gldhchsrgv lhrdikgsnl lldnngilki adfglasfyd plqnqpftsr
      301 vvtlwyrppe lllgatyygt avdlwstgci laelyagkpi mpgrteveql hkifklcgsp
      361 sedywrkskl phatifkpqr pyrrcvaetf kefpapalal vetllsidps drgsaasalk
      421 seffttkplp cgpsslpkyp pskefdakmr neearrqgaa gtkgqrpele rkatresraa
      481 papdanaelv lsmqkrqnqs nsksrsekfn phpeemasgf pidpprpsqa iesnadahgn
      541 hpkrgshsgp lshraawtks gknrddppki ligadlsmms glvvarrnnl isedhrersg
      601 ssqseapklf arfpgsfkea sesfiqqdqe hnmqqkedgr sdnkdpvllg ygskgnkihy
      661 sgpllvpsgn vdqmlkdhdr qiqeavrrar ldkakkrkvq leanhmstts lfvsgc
//
LOCUS       XP_016676051             703 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase At1g54610 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016676051
VERSION     XP_016676051.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820562.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676051.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..703
                     /product="probable serine/threonine-protein kinase
                     At1g54610 isoform X2"
                     /calculated_mol_wt=78224
     Region          127..411
                     /region_name="STKc_CDK9_like"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; cd07840"
                     /db_xref="CDD:270832"
     Site            order(133..136,141,154,156,173,187,205..208,211,213..214,
                     251,253,255..256,258,269,272,285,287..290,292,330..331)
                     /site_type="active"
                     /db_xref="CDD:270832"
     Site            order(133..136,141,154,156,187,205..208,211,214,255..256,
                     258,269)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270832"
     Site            order(165..167,169,172,176,179,189..192,194,201)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270832"
     Site            order(173,213,251,253,272,285,287..290,292,330..331)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270832"
     Site            order(268..279,284..292)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270832"
     CDS             1..703
                     /gene="LOC107895270"
                     /coded_by="XM_016820562.2:881..2992"
                     /db_xref="GeneID:107895270"
ORIGIN      
        1 mgcicckpsa iedskqspts kvsldvrvsm atsskredsq rtkdrygnse grtmlidkqv
       61 ngsvrihgen ldrkrekvec vvrqhpgrgs vpkaiegeqv aagwpawlaa vageaiqgwi
      121 prpadsfekl dkigqgtysn vyrardldqk kvvalkkvrf dnlepesvrf mareihilrr
      181 ldhpnvikle glvtsrmscs lylvfeymeh dlaglasnpg lkfsepqvkc ymqqllcgld
      241 hchsrgvlhr dikgsnllld nngilkiadf glasfydplq nqpftsrvvt lwyrppelll
      301 gatyygtavd lwstgcilae lyagkpimpg rteveqlhki fklcgspsed ywrksklpha
      361 tifkpqrpyr rcvaetfkef papalalvet llsidpsdrg saasalksef fttkplpcgp
      421 sslpkyppsk efdakmrnee arrqgaagtk gqrpelerka tresraapap danaelvlsm
      481 qkrqnqsnsk srsekfnphp eemasgfpid pprpsqaies nadahgnhpk rgshsgplsh
      541 raawtksgkn rddppkilig adlsmmsglv varrnnlise dhrersgssq seapklfarf
      601 pgsfkeases fiqqdqehnm qqkedgrsdn kdpvllgygs kgnkihysgp llvpsgnvdq
      661 mlkdhdrqiq eavrrarldk akkrkvqlea nhmsttslfv sgc
//
LOCUS       XP_016676053             423 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14A [Gossypium hirsutum].
ACCESSION   XP_016676053
VERSION     XP_016676053.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820564.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676053.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..423
                     /product="beta-glucuronosyltransferase GlcAT14A"
                     /calculated_mol_wt=47603
     Region          5..423
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..423
                     /gene="LOC107895271"
                     /coded_by="XM_016820564.2:419..1690"
                     /db_xref="GeneID:107895271"
ORIGIN      
        1 mvsmlnmekk wvfplvitsl ictilvvtcf nmglvssvhk insifsifpa hismnqrkpg
       61 yaeskidtgp lpppsgpalp rfaylvsgsk gdleklwrtl halyhprnqy vvhldleapa
      121 vervtlasri anhtvfskvg nvymitkanm vtyrgptmva ntlhacaihl nrsknwdwfi
      181 nlsasdyplv tqddlidafs dlnqnlnfie htsqlgwkad krampliidp glymstksdi
      241 fwtsqrralp tafklftgsa wtvlshsfve fcvwgwdnlp rtllmyytnf lsspegyfqt
      301 vvcnvpefak tvvnhdlhyi swdtppkqhp hiltlndmdk mirsnaafar kfsqddpvld
      361 kidkdllgre kgsftpgawc sgnpkclkvg dmnkikpgpg aqrvrqliak lstkailgrd
      421 qck
//
LOCUS       XP_016676048             627 aa            linear   PLN 06-AUG-2024
DEFINITION  proton pump-interactor 1 [Gossypium hirsutum].
ACCESSION   XP_016676048
VERSION     XP_016676048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820559.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..627
                     /product="proton pump-interactor 1"
                     /calculated_mol_wt=71090
     Region          120..>369
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..627
                     /gene="LOC107895269"
                     /coded_by="XM_016820559.2:200..2083"
                     /db_xref="GeneID:107895269"
ORIGIN      
        1 mgvevvgsem akvsvdkate vekslvhdke ngkldkdpvh sepikfgsni eesnkgeekn
       61 asdanfpsda vvewpapkqi hsfyfvryrp yddpkikaki dqadkevqkw nkarfqltde
      121 ikayksdrae llsqvkalni dfeqfktmlg ekkkeleplq qalgklrnnn neggrggics
      181 seeelndfiy slqyriqhes iplseekqll reikqlegtr ekvianaamr akiqeslgqk
      241 eaiqdqvklm gvdldgvrke qnaiwskkkq ikekvnaies kieslqeeln aviqkknkay
      301 etmqqlwkqr deanahfyqs rsllnkakel aakkdikale elstveaekf malwsskkav
      361 rddyekrilp sldqrqlsrd grirnpdekp lvvqetpvps etvtipkpsi rqpkeeakps
      421 pepdskppkk vqkdveskak isksspengi veekeisglg mlqkdttavk evdeaklkem
      481 kreeeiakak qamerkkkka eekaakaakr aekeaekklk erekkakkka aaasassanv
      541 eeptetvaev pepekdvnae epvpapvpvk nkvqkentvr yknrsrares lprpvlkrkk
      601 stnywiwaap aavvvlilia layyylv
//
LOCUS       XP_016676047             319 aa            linear   PLN 06-AUG-2024
DEFINITION  putative RNA-binding protein YlmH [Gossypium hirsutum].
ACCESSION   XP_016676047
VERSION     XP_016676047.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820558.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676047.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..319
                     /product="putative RNA-binding protein YlmH"
                     /calculated_mol_wt=34523
     Region          53..319
                     /region_name="PLN00051"
                     /note="RNA-binding S4 domain-containing protein;
                     Provisional"
                     /db_xref="CDD:177682"
     Site            order(245,256..257,259..260,262..263,266..267,269,
                     276..283,285)
                     /site_type="other"
                     /note="RNA binding surface [nucleotide binding]"
                     /db_xref="CDD:238095"
     CDS             1..319
                     /gene="LOC107895268"
                     /coded_by="XM_016820558.2:221..1180"
                     /db_xref="GeneID:107895268"
ORIGIN      
        1 maaasvtspw llrkafqala fsqplhtnkh lsfygnlcsf pfqyplrssg lchisqvikg
       61 dndvllkgvg dksaieevkh ildtarraat rrevfhtdfl tppvlkesmi vlqkladvka
      121 vaqggypqae rcrlsighse vltndpnvva ainisgnfsf qpcshgdflg ailgkgiare
      181 klgdiilqge kgahvlivpe lvdflmstld kvanvsvsct qipllaleye pprtqsfkti
      241 easlrvdala sagfkisrsk lvdlisngdv rvnwatvtkn gttlktgdii svsgkgrlki
      301 geinstkkgk fsveliryl
//
LOCUS       XP_016676044             363 aa            linear   PLN 06-AUG-2024
DEFINITION  probable bifunctional methylthioribulose-1-phosphate
            dehydratase/enolase-phosphatase E1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676044
VERSION     XP_016676044.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820555.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676044.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..363
                     /product="probable bifunctional
                     methylthioribulose-1-phosphate
                     dehydratase/enolase-phosphatase E1 isoform X1"
                     /calculated_mol_wt=40188
     Region          <35..76
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Region          123..344
                     /region_name="HAD_EP"
                     /note="Enolase-phosphatase similar to human
                     enolase-phosphatase E1 and and Xanthomonas oryzae pv.
                     Oryzae enolase-phosphatase Xep; cd01629"
                     /db_xref="CDD:319768"
     Site            order(127..131,138,142..143,227,262..264,268,296,321..322,
                     326..327)
                     /site_type="active"
                     /db_xref="CDD:319768"
     CDS             1..363
                     /gene="LOC107895267"
                     /coded_by="XM_016820555.2:262..1353"
                     /db_xref="GeneID:107895267"
ORIGIN      
        1 myvlsgdwsi isspspkpyp hkppkcsnca plfmkttavl vrhhgiyvwg dswisaktqa
       61 ecyhylfdaa iklhhlgldw stpdhgpiqn vkgfssinsm ikrvatkagt vesdfklqpy
      121 prcvvldieg tttpisfvtd vlfpyardnv grhlsatyds aetqddikll rsqveddlkq
      181 gvlgavpipl edpgkekvia slvanveami kadrkitalk qlqghiwrtg fennelegvv
      241 fddvpealek whalgikvyi yssgsrlaqr lifgntnygd lrkylsgffd tavgykretr
      301 syveiteslg vdkpsdilfv tdvyqeataa kaaglevvls irpgnsplpe nhgfktinsf
      361 lei
//
LOCUS       XP_016676045             326 aa            linear   PLN 06-AUG-2024
DEFINITION  probable bifunctional methylthioribulose-1-phosphate
            dehydratase/enolase-phosphatase E1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676045
VERSION     XP_016676045.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676045.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="probable bifunctional
                     methylthioribulose-1-phosphate
                     dehydratase/enolase-phosphatase E1 isoform X2"
                     /calculated_mol_wt=36059
     Region          86..307
                     /region_name="HAD_EP"
                     /note="Enolase-phosphatase similar to human
                     enolase-phosphatase E1 and and Xanthomonas oryzae pv.
                     Oryzae enolase-phosphatase Xep; cd01629"
                     /db_xref="CDD:319768"
     Site            order(90..94,101,105..106,190,225..227,231,259,284..285,
                     289..290)
                     /site_type="active"
                     /db_xref="CDD:319768"
     CDS             1..326
                     /gene="LOC107895267"
                     /coded_by="XM_016820556.2:392..1372"
                     /db_xref="GeneID:107895267"
ORIGIN      
        1 mvytygvthg svlklsddil fqaecyhylf daaiklhhlg ldwstpdhgp iqnvkgfssi
       61 nsmikrvatk agtvesdfkl qpyprcvvld iegtttpisf vtdvlfpyar dnvgrhlsat
      121 ydsaetqddi kllrsqvedd lkqgvlgavp ipledpgkek viaslvanve amikadrkit
      181 alkqlqghiw rtgfennele gvvfddvpea lekwhalgik vyiyssgsrl aqrlifgntn
      241 ygdlrkylsg ffdtavgykr etrsyveite slgvdkpsdi lfvtdvyqea taakaaglev
      301 vlsirpgnsp lpenhgfkti nsflei
//
LOCUS       XP_016676046             326 aa            linear   PLN 06-AUG-2024
DEFINITION  probable bifunctional methylthioribulose-1-phosphate
            dehydratase/enolase-phosphatase E1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676046
VERSION     XP_016676046.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820557.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676046.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="probable bifunctional
                     methylthioribulose-1-phosphate
                     dehydratase/enolase-phosphatase E1 isoform X2"
                     /calculated_mol_wt=36059
     Region          86..307
                     /region_name="HAD_EP"
                     /note="Enolase-phosphatase similar to human
                     enolase-phosphatase E1 and and Xanthomonas oryzae pv.
                     Oryzae enolase-phosphatase Xep; cd01629"
                     /db_xref="CDD:319768"
     Site            order(90..94,101,105..106,190,225..227,231,259,284..285,
                     289..290)
                     /site_type="active"
                     /db_xref="CDD:319768"
     CDS             1..326
                     /gene="LOC107895267"
                     /coded_by="XM_016820557.2:289..1269"
                     /db_xref="GeneID:107895267"
ORIGIN      
        1 mvytygvthg svlklsddil fqaecyhylf daaiklhhlg ldwstpdhgp iqnvkgfssi
       61 nsmikrvatk agtvesdfkl qpyprcvvld iegtttpisf vtdvlfpyar dnvgrhlsat
      121 ydsaetqddi kllrsqvedd lkqgvlgavp ipledpgkek viaslvanve amikadrkit
      181 alkqlqghiw rtgfennele gvvfddvpea lekwhalgik vyiyssgsrl aqrlifgntn
      241 ygdlrkylsg ffdtavgykr etrsyveite slgvdkpsdi lfvtdvyqea taakaaglev
      301 vlsirpgnsp lpenhgfkti nsflei
//
LOCUS       XP_016676042             420 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676042
VERSION     XP_016676042.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820553.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676042.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..420
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48981
     Region          309..>377
                     /region_name="MRP-S28"
                     /note="Mitochondrial ribosomal subunit protein; pfam10213"
                     /db_xref="CDD:463002"
     CDS             1..420
                     /gene="LOC107895266"
                     /coded_by="XM_016820553.2:217..1479"
                     /db_xref="GeneID:107895266"
ORIGIN      
        1 mkrvlfrgis lttrnffhsy tktnqnpvhs fnplaastrs rlrfyssesd spvekkpdpv
       61 iesasvaeah vkdvalpved vsnkelktri kkyfegdeea lpsvleailr rklagkheet
      121 ddelmdelev qprddvddee fesdfdnlys tdeeienlys ardivvkrmv kdeyfnmddq
      181 kwdemikeav qhgylkdtke ceeiledmls wdkllpdemk kkveerfnel gdmcergele
      241 veeayeqfke fedqmvmeyg kmmeaegppk fdetavpdlk knlddppgeg pilrwqtrav
      301 fapggdawhp knrkvkmsvt vkelglskhq frrlrelvgk ryhpgegelt itserfehre
      361 enrkdclrtl fslieeagka nkmveeartk yvknrlranp afmerlrakt mklqesttfp
//
LOCUS       XP_016676039             484 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676039
VERSION     XP_016676039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820550.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="protein DETOXIFICATION 19 isoform X1"
                     /calculated_mol_wt=52828
     Region          38..470
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(277,281,309,312,391,395,422,448,452)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..484
                     /gene="LOC107895263"
                     /coded_by="XM_016820550.2:222..1676"
                     /db_xref="GeneID:107895263"
ORIGIN      
        1 mepsnssldt tallseasqr qdqstetrcl rnvldveeak tqilfslpmi ltnvfyyaia
       61 lvsvmfaghl geldlagatl answanvtgy afmvglsgal etlcgqgfga ktynmlgiyl
      121 qasciisflf siiisilwfy tepiliflhq qpdiakkada ylkyqipavf afgliqnvlr
      181 flqtqsvvmp lvlfsglplv lhfgiaytlv ywtslglega smaasisfwi sflllityva
      241 fsnkfehtwe gfsfesfgyi ipdlklalps aamvcleywa feilvllagl mpnseittsl
      301 vamcvnteai afnftyglsa aastrvsnel gadkpekakk amavtlqlvv llalivvlal
      361 afghdtwagf fsdsasiikd fatmtpflai siavdsfqsv lsgvargigw qhmvvvvnla
      421 syyvvgmpia aiagfkfkly akglwiglic glliqaaill vitfhrrwsk idisaerdee
      481 nsvd
//
LOCUS       XP_016676040             447 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 19 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676040
VERSION     XP_016676040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820551.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..447
                     /product="protein DETOXIFICATION 19 isoform X2"
                     /calculated_mol_wt=48683
     Region          38..439
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     CDS             1..447
                     /gene="LOC107895263"
                     /coded_by="XM_016820551.2:171..1514"
                     /db_xref="GeneID:107895263"
ORIGIN      
        1 mepsnssldt tallseasqr qdqstetrcl rnvldveeak tqilfslpmi ltnvfyyaia
       61 lvsvmfaghl geldlagatl answanvtgy afmvglsgal etlcgqgfga ktynmlgiyl
      121 qasciisflf siiisilwfy tepiliflhq qpdiakkada ylkyqipavf afgliqnvlr
      181 flqtqsvvmp lvlfsglplv lhfgiaytlv ywtslglega smaasisfwi sflllityva
      241 fsnkfehtwe gfsfesfgyi ipdlklalps aamvcleywa feilvllagl mpnseittsl
      301 vamcvnteai afnftyglsa aastrvsnel gadkpekakk amavtlqlvv llalivvlal
      361 afghdtwagf fsdsasiikd fatmtpflai siavdsfqsv lsgvargigw qhmvvvvnla
      421 syyvvgmpia aiagfkfkly akemvkd
//
LOCUS       XP_016675154             459 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 18 [Gossypium hirsutum].
ACCESSION   XP_016675154
VERSION     XP_016675154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819665.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..459
                     /product="protein DETOXIFICATION 18"
                     /calculated_mol_wt=49851
     Region          31..444
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     CDS             1..459
                     /gene="LOC107894389"
                     /coded_by="XM_016819665.2:35..1414"
                     /db_xref="GeneID:107894389"
ORIGIN      
        1 mesplnvega ngcrpegtng rcwkkvmdlg eaktqimfav pmvlsnvfyf sitmvsvmfa
       61 ghlgevelag stlanswatv tgfafmtgls galetlcgqg fgakmhkmlg iylqasciis
      121 fffsiiisvl wsftepilvl lhqdpeisra aavymkylip glfaygflqn ilrflqtqsi
      181 viplvvfsvv plgihfgivy slvnktslgy kgapmaasvs iwisflllal yvlfankfqn
      241 twtgfsfesf ryiirnskla lpsaamicle vwafeilvvl aglmpnseis tslvaictrv
      301 snelgagnan qakhamkvtl klsillavav vvslalghdi wagffsdshs inkkfaemtp
      361 llipsiavda iqgvlsgavr gcgwqrvtvl anlgafyfig mpiaivlgfk fhlyvkglwi
      421 glicglccqa ctlmlitfyk kwakidllgk dnsetqlsv
//
LOCUS       XP_016676038             182 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016676038
VERSION     XP_016676038.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820549.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676038.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..182
                     /product="squamosa promoter-binding-like protein 3"
                     /calculated_mol_wt=20287
     Region          55..128
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..182
                     /gene="LOC107895262"
                     /coded_by="XM_016820549.2:178..726"
                     /db_xref="GeneID:107895262"
ORIGIN      
        1 mnkdfiaeel dndmqeeeee gvggdhgfpd dekkkkgygr rgaagggggv sppacqvekc
       61 gldlsdakry hrrhkvceih akapfvvvag lrqrfcqqcs rfhelpefde akrscrrrla
      121 ghnerrrkss aesssaaess nrrgmmisaq lkeshyladd qrarvnpmai hgsssfkrsq
      181 ir
//
LOCUS       XP_016676032             700 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 25 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676032
VERSION     XP_016676032.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820543.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676032.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..700
                     /product="serine/threonine-protein kinase 25 isoform X1"
                     /calculated_mol_wt=77514
     Region          14..291
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,140,142..145,
                     147,157..158,161,175..178,180,208,217)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,144..145,
                     147,158)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,140,142..144,161,175..178,180,208,217)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(157..168,170..180)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..700
                     /gene="LOC107895261"
                     /coded_by="XM_016820543.2:355..2457"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 madieglqpa agyrfsqvel igrgafgdvy kvfdkelkke vaikvidlee seddiediqn
       61 eisvlsqcrc qyiteyygsy lhqtklwlim eymaggsvad llqsgpplde msiasisrkd
      121 sqryqsnllc slletfllsl laatnillte ngdvkvadfg vsaqltrtis qrktfvgtpf
      181 wmapeviqns dgynekadiw slgitviema kgeppladlh pmrvlfiipq enppqldehf
      241 srpmkefvsl clkkvpaera takellkhrf iknarksqkl lerirerpky qlkedaetpk
      301 ngpkpvgesa dtvkvtrdvr geetvrasnq gktfrsagwd fsiggpqntg tvqsapkppq
      361 vrerkldvty nqaiqrpres gntlnefpev ssgkgtrely snenqdnyhd detlvggsgt
      421 vvrrsprgsq ssglirdpss lsssehasfe dastsgtivf rgqhddsdsp ptprsrlgiq
      481 grpsaasved stsnlaeaka amqaglrkgn ardrsapskn ngtgnenrrr dqmsnssnss
      541 rssheyfdaq kafprtrqps ddeenakits sciplsmlli pslkeviadd segrvmhvvt
      601 nslvhmertk pgsckalvck lldrlasske psmkglqdva armfnkgkvt pedvqnsspe
      661 sdgkkrlqhk elhsnsnlsp larfllsrwq shsesqpelk
//
LOCUS       XP_040941298             699 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941298
VERSION     XP_040941298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085364.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..699
                     /product="serine/threonine-protein kinase 25 isoform X2"
                     /calculated_mol_wt=77358
     Region          14..291
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,140,142..145,
                     147,157..158,161,175..178,180,208,217)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,144..145,
                     147,158)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,140,142..144,161,175..178,180,208,217)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(157..168,170..180)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..699
                     /gene="LOC107895261"
                     /coded_by="XM_041085364.1:356..2455"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 madieglqpa agyrfsqvel igrgafgdvy kvfdkelkke vaikvidlee seddiediqn
       61 eisvlsqcrc qyiteyygsy lhqtklwlim eymaggsvad llqsgpplde msiasisrkd
      121 sqryqsnllc slletfllsl laatnillte ngdvkvadfg vsaqltrtis qrktfvgtpf
      181 wmapeviqns dgynekadiw slgitviema kgeppladlh pmrvlfiipq enppqldehf
      241 srpmkefvsl clkkvpaera takellkhrf iknarksqkl lerirerpky qlkedaetpk
      301 ngpkpvgesa dtvkvtrdvr geetvrasnq gktfrsagwd fsiggpqntg tvqsapkppq
      361 vrerkldvty nqaiqrpres gntlnefpev ssgkgtrely snenqdnyhd detlvggsgt
      421 vvrrsprgsq ssglirdpss lsssehasfe dastsgtivf rgqhddsdsp ptprsrlgiq
      481 grpsaasved stsnlaeaka amqaglrkgn ardrsapskn ngtgnenrrr dqmsnssnss
      541 ssheyfdaqk afprtrqpsd deenakitss ciplsmllip slkeviadds egrvmhvvtn
      601 slvhmertkp gsckalvckl ldrlasskep smkglqdvaa rmfnkgkvtp edvqnsspes
      661 dgkkrlqhke lhsnsnlspl arfllsrwqs hsesqpelk
//
LOCUS       XP_016676033             696 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 25 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016676033
VERSION     XP_016676033.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820544.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676033.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..696
                     /product="serine/threonine-protein kinase 25 isoform X3"
                     /calculated_mol_wt=77173
     Region          14..287
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,204,213)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,140..141,
                     143,154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,136,138..140,157,171..174,176,204,213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(153..164,166..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..696
                     /gene="LOC107895261"
                     /coded_by="XM_016820544.2:355..2445"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 madieglqpa agyrfsqvel igrgafgdvy kvfdkelkke vaikvidlee seddiediqn
       61 eisvlsqcrc qyiteyygsy lhqtklwlim eymaggsvad llqsgpplde msiasisrdl
      121 lhaieylhne gkihrdikat nilltengdv kvadfgvsaq ltrtisqrkt fvgtpfwmap
      181 eviqnsdgyn ekadiwslgi tviemakgep pladlhpmrv lfiipqenpp qldehfsrpm
      241 kefvslclkk vpaeratake llkhrfikna rksqklleri rerpkyqlke daetpkngpk
      301 pvgesadtvk vtrdvrgeet vrasnqgktf rsagwdfsig gpqntgtvqs apkppqvrer
      361 kldvtynqai qrpresgntl nefpevssgk gtrelysnen qdnyhddetl vggsgtvvrr
      421 sprgsqssgl irdpsslsss ehasfedast sgtivfrgqh ddsdspptpr srlgiqgrps
      481 aasvedstsn laeakaamqa glrkgnardr sapsknngtg nenrrrdqms nssnssrssh
      541 eyfdaqkafp rtrqpsddee nakitsscip lsmllipslk eviaddsegr vmhvvtnslv
      601 hmertkpgsc kalvcklldr lasskepsmk glqdvaarmf nkgkvtpedv qnsspesdgk
      661 krlqhkelhs nsnlsplarf llsrwqshse sqpelk
//
LOCUS       XP_016676034             680 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 25 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016676034
VERSION     XP_016676034.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820545.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676034.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..680
                     /product="serine/threonine-protein kinase 25 isoform X4"
                     /calculated_mol_wt=75611
     Region          14..271
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..680
                     /gene="LOC107895261"
                     /coded_by="XM_016820545.2:355..2397"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 madieglqpa agyrfsqvel igrgafgdvy kvfdkelkke vaikvidlee seddiediqn
       61 eisvlsqcrc qyiteyygsy lhqtklwlim eymaggsvad llqsgpplde msiasisrdl
      121 lhaieylhne gkihrdikgc rfwcfstink dniaekgtpf wmapeviqns dgynekadiw
      181 slgitviema kgeppladlh pmrvlfiipq enppqldehf srpmkefvsl clkkvpaera
      241 takellkhrf iknarksqkl lerirerpky qlkedaetpk ngpkpvgesa dtvkvtrdvr
      301 geetvrasnq gktfrsagwd fsiggpqntg tvqsapkppq vrerkldvty nqaiqrpres
      361 gntlnefpev ssgkgtrely snenqdnyhd detlvggsgt vvrrsprgsq ssglirdpss
      421 lsssehasfe dastsgtivf rgqhddsdsp ptprsrlgiq grpsaasved stsnlaeaka
      481 amqaglrkgn ardrsapskn ngtgnenrrr dqmsnssnss rssheyfdaq kafprtrqps
      541 ddeenakits sciplsmlli pslkeviadd segrvmhvvt nslvhmertk pgsckalvck
      601 lldrlasske psmkglqdva armfnkgkvt pedvqnsspe sdgkkrlqhk elhsnsnlsp
      661 larfllsrwq shsesqpelk
//
LOCUS       XP_016676035             607 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016676035
VERSION     XP_016676035.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820546.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676035.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..607
                     /product="germinal center kinase 1 isoform X5"
                     /calculated_mol_wt=66923
     Region          <1..198
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..607
                     /gene="LOC107895261"
                     /coded_by="XM_016820546.2:248..2071"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 meymaggsva dllqsgppld emsiasisrd llhaieylhn egkihrdika tnilltengd
       61 vkvadfgvsa qltrtisqrk tfvgtpfwma peviqnsdgy nekadiwslg itviemakge
      121 ppladlhpmr vlfiipqenp pqldehfsrp mkefvslclk kvpaeratak ellkhrfikn
      181 arksqkller irerpkyqlk edaetpkngp kpvgesadtv kvtrdvrgee tvrasnqgkt
      241 frsagwdfsi ggpqntgtvq sapkppqvre rkldvtynqa iqrpresgnt lnefpevssg
      301 kgtrelysne nqdnyhddet lvggsgtvvr rsprgsqssg lirdpsslss sehasfedas
      361 tsgtivfrgq hddsdspptp rsrlgiqgrp saasvedsts nlaeakaamq aglrkgnard
      421 rsapsknngt gnenrrrdqm snssnssrss heyfdaqkaf prtrqpsdde enakitssci
      481 plsmllipsl keviaddseg rvmhvvtnsl vhmertkpgs ckalvcklld rlasskepsm
      541 kglqdvaarm fnkgkvtped vqnsspesdg kkrlqhkelh snsnlsplar fllsrwqshs
      601 esqpelk
//
LOCUS       XP_016676036             575 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016676036
VERSION     XP_016676036.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676036.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..575
                     /product="germinal center kinase 1 isoform X6"
                     /calculated_mol_wt=63541
     Region          <9..166
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..575
                     /gene="LOC107895261"
                     /coded_by="XM_016820547.2:231..1958"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 mkcqlpvfqg kihrdikatn illtengdvk vadfgvsaql trtisqrktf vgtpfwmape
       61 viqnsdgyne kadiwslgit viemakgepp ladlhpmrvl fiipqenppq ldehfsrpmk
      121 efvslclkkv paeratakel lkhrfiknar ksqkllerir erpkyqlked aetpkngpkp
      181 vgesadtvkv trdvrgeetv rasnqgktfr sagwdfsigg pqntgtvqsa pkppqvrerk
      241 ldvtynqaiq rpresgntln efpevssgkg trelysnenq dnyhddetlv ggsgtvvrrs
      301 prgsqssgli rdpsslssse hasfedasts gtivfrgqhd dsdspptprs rlgiqgrpsa
      361 asvedstsnl aeakaamqag lrkgnardrs apsknngtgn enrrrdqmsn ssnssrsshe
      421 yfdaqkafpr trqpsddeen akitsscipl smllipslke viaddsegrv mhvvtnslvh
      481 mertkpgsck alvcklldrl asskepsmkg lqdvaarmfn kgkvtpedvq nsspesdgkk
      541 rlqhkelhsn snlsplarfl lsrwqshses qpelk
//
LOCUS       XP_016676037             575 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016676037
VERSION     XP_016676037.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676037.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..575
                     /product="germinal center kinase 1 isoform X6"
                     /calculated_mol_wt=63541
     Region          <9..166
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..575
                     /gene="LOC107895261"
                     /coded_by="XM_016820548.2:299..2026"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 mkcqlpvfqg kihrdikatn illtengdvk vadfgvsaql trtisqrktf vgtpfwmape
       61 viqnsdgyne kadiwslgit viemakgepp ladlhpmrvl fiipqenppq ldehfsrpmk
      121 efvslclkkv paeratakel lkhrfiknar ksqkllerir erpkyqlked aetpkngpkp
      181 vgesadtvkv trdvrgeetv rasnqgktfr sagwdfsigg pqntgtvqsa pkppqvrerk
      241 ldvtynqaiq rpresgntln efpevssgkg trelysnenq dnyhddetlv ggsgtvvrrs
      301 prgsqssgli rdpsslssse hasfedasts gtivfrgqhd dsdspptprs rlgiqgrpsa
      361 asvedstsnl aeakaamqag lrkgnardrs apsknngtgn enrrrdqmsn ssnssrsshe
      421 yfdaqkafpr trqpsddeen akitsscipl smllipslke viaddsegrv mhvvtnslvh
      481 mertkpgsck alvcklldrl asskepsmkg lqdvaarmfn kgkvtpedvq nsspesdgkk
      541 rlqhkelhsn snlsplarfl lsrwqshses qpelk
//
LOCUS       XP_040941299             575 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040941299
VERSION     XP_040941299.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085365.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..575
                     /product="germinal center kinase 1 isoform X7"
                     /calculated_mol_wt=63771
     Region          <30..166
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..575
                     /gene="LOC107895261"
                     /coded_by="XM_041085365.1:299..2026"
                     /db_xref="GeneID:107895261"
ORIGIN      
        1 mkcqlpvfqg icfmqlniyi mkerfteisk vadfgvsaql trtisqrktf vgtpfwmape
       61 viqnsdgyne kadiwslgit viemakgepp ladlhpmrvl fiipqenppq ldehfsrpmk
      121 efvslclkkv paeratakel lkhrfiknar ksqkllerir erpkyqlked aetpkngpkp
      181 vgesadtvkv trdvrgeetv rasnqgktfr sagwdfsigg pqntgtvqsa pkppqvrerk
      241 ldvtynqaiq rpresgntln efpevssgkg trelysnenq dnyhddetlv ggsgtvvrrs
      301 prgsqssgli rdpsslssse hasfedasts gtivfrgqhd dsdspptprs rlgiqgrpsa
      361 asvedstsnl aeakaamqag lrkgnardrs apsknngtgn enrrrdqmsn ssnssrsshe
      421 yfdaqkafpr trqpsddeen akitsscipl smllipslke viaddsegrv mhvvtnslvh
      481 mertkpgsck alvcklldrl asskepsmkg lqdvaarmfn kgkvtpedvq nsspesdgkk
      541 rlqhkelhsn snlsplarfl lsrwqshses qpelk
//
LOCUS       XP_016676031             174 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor 4 [Gossypium hirsutum].
ACCESSION   XP_016676031
VERSION     XP_016676031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820542.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..174
                     /product="ethylene-responsive transcription factor 4"
                     /calculated_mol_wt=18858
     Region          20..76
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(22..23,25,27,29,31,35,37,44,46,49)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..174
                     /gene="LOC107895260"
                     /coded_by="XM_016820542.2:165..689"
                     /db_xref="GeneID:107895260"
ORIGIN      
        1 maprskpinp nsnlvsmeir yrgvrkrpwg ryaaeirdpk rktrvwlgtf dtaedaaray
       61 daaarelrga kaktnfadsn ftrspshsst vesssppppl dltlavtanr pqfffdafas
      121 agsgcplscg aqsdtdsssw vvdleggggq vrefdldlnk lpaemklpel pkak
//
LOCUS       XP_040941300             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941300
VERSION     XP_040941300.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085366.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49070
     Region          309..>377
                     /region_name="MRP-S28"
                     /note="Mitochondrial ribosomal subunit protein; pfam10213"
                     /db_xref="CDD:463002"
     CDS             1..421
                     /gene="LOC107895259"
                     /coded_by="XM_041085366.1:37..1302"
                     /db_xref="GeneID:107895259"
ORIGIN      
        1 mkrvlfrgis lttrnflhsy tktnqnpvps ftplavstrs rlrffssesd spiekkpdpv
       61 lesasvadsh vkdvalpved vsnkelktri kkyfegdeea lpsvleailr rklagkheet
      121 ddelmdelev qprdnvddee fesdfdnlys tdeeienlys ardivvkrmv kdeyfnmddq
      181 kwdemikeav qhgylkdtke ceeiledmls wdkllpdemk kkveerfnel gdmcergele
      241 veeayeqfke fedqmvmeyg kmveaeglpk fdetavpdlk knlddppgeg pilrwqtrvv
      301 fapagdawhp knrkvkmsvt vkelglskhq frrlrelvgk ryhpgkdelt itserfehre
      361 enrkdclrtl fslieeagka nkmmeeartk yvknrlranp afierlrakt mklqesttsh
      421 a
//
LOCUS       XP_016676030             540 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g15200
            [Gossypium hirsutum].
ACCESSION   XP_016676030
VERSION     XP_016676030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820541.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..540
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g15200"
                     /calculated_mol_wt=63029
     Region          151..178
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <176..>408
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          183..212
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          220..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          254..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          320..369
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          393..419
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..470
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          427..454
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          458..>493
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          460..489
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..540
                     /gene="LOC107895257"
                     /coded_by="XM_016820541.2:598..2220"
                     /db_xref="GeneID:107895257"
ORIGIN      
        1 mmrlitqsqm lkclcqeavi hrkfpfdfpk shflstsnpa gpqyhpsvhi fpflgatknp
       61 vflhslansd estgfhqksy eayslklqnv lknhrnskte eielaldqck vtisdglvle
      121 lvrrnrfdwk layvffqwvs kksgnslgfd vcneildilg rmhrfeeltk vfdkmsergl
      181 idgrtfrilv nryaaahmve daigvfhrrk efefkddlva fqvllmclcr ykhvetaetl
      241 yqlkrrefgy dlktmnivln gwcvlgnvhe akrfwkdiie skykpdlfty gtfinaltkk
      301 gklgtamklf rgmwekgcnp dvvicncvid alcfkkripe alevfremke rgcspnvaty
      361 nslikhlgki grmekvyeil demeekegcs pnnvtfnyll kfsekpeevp gvlermerng
      421 cnmccdtynl ilrlymkwdh eekvrqmwde igksglgpdr rsytvmihwl ydkgrvedal
      481 syfnemtskg ivperrteil vnsmrnklee qegekqkkdl gingksprfr skrfkktkar
//
LOCUS       XP_016676029             349 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CUP-SHAPED COTYLEDON 2 [Gossypium hirsutum].
ACCESSION   XP_016676029
VERSION     XP_016676029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820540.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..349
                     /product="protein CUP-SHAPED COTYLEDON 2"
                     /calculated_mol_wt=38498
     Region          15..141
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..349
                     /gene="LOC107895256"
                     /coded_by="XM_016820540.2:408..1457"
                     /db_xref="GeneID:107895256"
ORIGIN      
        1 mdsyhhfdng ethlppgfrf hptdeelity yllkkvldss ftgraiaevd lnkcepwelp
       61 drakmgekew yffslrdrky ptglrtnrat eagywkatgk dreiyssktc alvgmkktlv
      121 fyrgrapkge ksnwvvheyr legkfayhyl srsskdewvi srvfqkssgg akkatmsaas
      181 mvlyqepssp ssvslpplld ttnatgsata tgasltdrds csydshnqse hvscfstiaa
      241 tssatfpayh sgfdlalptp pqmnnsfdsi arytrnvgvp vfpslrslee nlqlpfyfse
      301 ptlagaappl dggssanwga vseegnsgsv adgkmpnigp teldcmwty
//
LOCUS       XP_016676027             417 aa            linear   PLN 06-AUG-2024
DEFINITION  probable aminotransferase TAT2 [Gossypium hirsutum].
ACCESSION   XP_016676027
VERSION     XP_016676027.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820538.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..417
                     /product="probable aminotransferase TAT2"
                     /calculated_mol_wt=46308
     Region          1..410
                     /region_name="PLN02656"
                     /note="tyrosine transaminase"
                     /db_xref="CDD:178262"
     CDS             1..417
                     /gene="LOC107895254"
                     /coded_by="XM_016820538.2:342..1595"
                     /db_xref="GeneID:107895254"
ORIGIN      
        1 mengsvnhem etastitikg ilsllmqnld ennckrlipl gmgdptlysc fhtthvagqa
       61 vvealqsdkf ngysptvglp qtrraiaeyl ssdlpyklsc ddvfitsgct qaidvalaml
      121 arpganvlip rpgfpiyelc atfrrleiry ydllpengwe vdldsveala dqntvgfvii
      181 npgnpcgnvy syqhlkkiae aaeklkipvi adevyghlvf gdnpfvpmgv fgsmvpvltl
      241 gslskrwivp gwrlgwfvin dpscmfknpk iierikkyfd ilggpatfiq aavphiieqt
      301 dnvffkktin tlkqtsdicw dmikeipclt cpqkpqgsma vmiklnissl edisddidfc
      361 frlakeesvi ilpgtavglk nwlritfaad pqslkealgr lksfckrhtk lmlqqqq
//
LOCUS       XP_016676028             149 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676028
VERSION     XP_016676028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820539.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..149
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16119
     CDS             1..149
                     /gene="LOC107895255"
                     /coded_by="XM_016820539.2:1328..1777"
                     /db_xref="GeneID:107895255"
ORIGIN      
        1 mmglrwgpvg tqeneldryr svlldttldk gnnrvigfde nldplgtaih sglscnaass
       61 sneriratkp mesgaqvrrk vvplcvavdv misgiepysd dggsnplswe vsrhiqwrtl
      121 ddaaevgdcf qggtlynclc sivkfcgii
//
LOCUS       XP_040941301             713 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional regulator ATRX [Gossypium hirsutum].
ACCESSION   XP_040941301
VERSION     XP_040941301.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085367.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..713
                     /product="transcriptional regulator ATRX"
                     /calculated_mol_wt=78953
     CDS             1..713
                     /gene="LOC107895250"
                     /coded_by="XM_041085367.1:392..2533"
                     /db_xref="GeneID:107895250"
ORIGIN      
        1 mdperphrst sinnsstsgn ntselficft srlsssssmk issksilspg rsressshis
       61 lssslsrrlr nngsmkggqa spmfptnsgk krgsgfdnpe psspkvtcig qvrvktkkqg
      121 kkfracrskr rgevsfrkvd hnnggnslds sssqdynmgh flssnsshhq qqqeckkwvh
      181 lplticealr afgaefncfl pcrsscmanq rdkegktrgs sanvgngngn kngngrsscg
      241 avftrwllav qegegkerei elvvgggedd erressemmm lrssqrrhvf edieindfan
      301 enkgddddea aarvsicipp knalllmrcr sdpvkmaala nkfwetpvpk ekhddegeed
      361 gneregevee helvqedtle aereesevkf eqemehqvse vsdmyvscea neeqeeipea
      421 eaeaeteves vlvkngstgv aeetsidyqd qeheheheve edpqestske qtltevplsl
      481 eneaaieelh qaeeenvngn geeereeqtk aeedeeedst veeeeegets qerseleype
      541 tdleneskes esqdkllpdc lllmmcepkl smevsketwv cstdfirwlp ekrkqqvvkp
      601 kdsgdepkrr isvdsnprpi flqpprsscs fpaappmdta gaaavngagg ggskattmeh
      661 klvggkgyep fpltrcksep rrssaklapd acfwknrklg ptsvgvgaag vgf
//
LOCUS       XP_016676021             375 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016676021
VERSION     XP_016676021.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820532.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..375
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X1"
                     /calculated_mol_wt=41739
     Region          13..75
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(13,65,68..69,72)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          132..260
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..375
                     /gene="LOC107895249"
                     /coded_by="XM_016820532.2:439..1566"
                     /db_xref="GeneID:107895249"
ORIGIN      
        1 mgrhpssggp afrftqteva emetilqehh nqmpvreilm sladkfsesa erkgkivvqf
       61 kqiwnwfqnr ryairaksnk vpgklnitsm prddsnpmrn vpqpvaapvp phmtapmpas
      121 tvpgagrnls esymefeaks srdgawydva tflahrylda gdpevqvria gfgpeedewv
      181 nirkhvrqrs lpceasecva vlpgdlvlcf qegkdqalyf dahvldaqrr rhdirgcrcr
      241 flvrydhdqs eeivplrkvc rrpetdyrlq qlhtasnlsn dqhktstdqs tapapkiigs
      301 steamqklqn pdqsrtatds hfnvsvaaqt tnqeskisgi vttdatdpri spvknamaaa
      361 atgigpgqnv qeakl
//
LOCUS       XP_016676022             373 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016676022
VERSION     XP_016676022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820533.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..373
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X2"
                     /calculated_mol_wt=41543
     Region          13..75
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(13,65,68..69,72)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          130..258
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..373
                     /gene="LOC107895249"
                     /coded_by="XM_016820533.2:404..1525"
                     /db_xref="GeneID:107895249"
ORIGIN      
        1 mgrhpssggp afrftqteva emetilqehh nqmpvreilm sladkfsesa erkgkivvqf
       61 kqiwnwfqnr ryairaksnk vpgklnitsm prddsnpmrn vpqpvaapvp phmtapmpas
      121 tgagrnlses ymefeakssr dgawydvatf lahryldagd pevqvriagf gpeedewvni
      181 rkhvrqrslp ceasecvavl pgdlvlcfqe gkdqalyfda hvldaqrrrh dirgcrcrfl
      241 vrydhdqsee ivplrkvcrr petdyrlqql htasnlsndq hktstdqsta papkiigsst
      301 eamqklqnpd qsrtatdshf nvsvaaqttn qeskisgivt tdatdprisp vknamaaaat
      361 gigpgqnvqe akl
//
LOCUS       XP_016676020             267 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA exonuclease 4 [Gossypium hirsutum].
ACCESSION   XP_016676020
VERSION     XP_016676020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820531.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..267
                     /product="RNA exonuclease 4"
                     /calculated_mol_wt=30524
     Region          79..226
                     /region_name="REX4_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     4, XPMC2, Interferon Stimulated Gene product of 20 kDa,
                     and similar proteins; cd06144"
                     /db_xref="CDD:99847"
     Site            order(82..85,87,124,128,160..161,163..165,213,218)
                     /site_type="active"
                     /db_xref="CDD:99847"
     Site            order(82..85,87,124,128,160..161,163..164,213,218)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99847"
     Site            order(82,84,165,213,218)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99847"
     CDS             1..267
                     /gene="LOC107895248"
                     /coded_by="XM_016820531.2:147..950"
                     /db_xref="GeneID:107895248"
ORIGIN      
        1 msserkknpe hfqlnpnwaq lqqklkssak psrhsknpqs etpnsilgkr kerpnsetdd
       61 akpnplmptn ddssvtdvla mdcemvgvgq gnksalgrvt vvnkwrnviy defvrpverv
      121 vdfrthisgi rprdlrkakd frvvqkkvae likgrilvgh alhndlkall lthpkkdlrd
      181 tsefqpflke grrkalrhla aevlgveiqn gehcpvddar aamllyskhr kewersvkdq
      241 lrlkekqkkr kqrkkpkadi nhslias
//
LOCUS       XP_016676019             159 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein [Gossypium hirsutum].
ACCESSION   XP_016676019
VERSION     XP_016676019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820530.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="28 kDa heat- and acid-stable phosphoprotein"
                     /calculated_mol_wt=18598
     Region          71..148
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..159
                     /gene="LOC107895247"
                     /coded_by="XM_016820530.2:99..578"
                     /db_xref="GeneID:107895247"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe elragtsarp rtfrkeeaev eeeeereese eeieeepekr
       61 kgtqglieie npnlakqknv kakdvdmgkt telsrreree iekqkahery mklqeqgkte
      121 qsrkdlerla mirqqraeaa kkreeekaak eqkkveark
//
LOCUS       XP_016676017             528 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ZFP1 [Gossypium hirsutum].
ACCESSION   XP_016676017
VERSION     XP_016676017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820528.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..528
                     /product="probable E3 ubiquitin-protein ligase ZFP1"
                     /calculated_mol_wt=57799
     Region          474..520
                     /region_name="RING-H2_RNF24-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF24, RNF122, and similar proteins; cd16469"
                     /db_xref="CDD:438132"
     CDS             1..528
                     /gene="LOC107895246"
                     /coded_by="XM_016820528.2:206..1792"
                     /db_xref="GeneID:107895246"
ORIGIN      
        1 mgqrnmlcpn qmidlemdqq gqgylhpepc ifmggrpnyp ppdiqmgvta pgnatsldth
       61 plpehydsgm fyglpqypgv qhhnhspnld lgigsasnyy ipyvanpsss apvnhgpadq
      121 mpsssnfnll gvsaneyarn chfmdnvsgs ykrknsegvp gnfphfnaps sssssvtpls
      181 srhpdgvgtm dgasfnipqy rgngpptire agpqrsvrnr lgatpvepvl mhsanhvfqg
      241 nyirqpfqpt itdggasawt qvpgvpymhg snvgapmets lrsstnfsha splelrnhnf
      301 hhpappiegv rghsinihpq vaavpprfpa syasqssmnl shdgwemgrr hlgpvppsgf
      361 rlyhsrresg ivpettvrhr nlphlrvlpp dgvavlelpe fyevgnfidh hrdmrldied
      421 msyeellalg erignvntgl seetitsklk trsystfatt inleeaapid qepdscivcq
      481 edyknqekig tldcgheyha gclkkwlvvk nvcpicksea iatesknv
//
LOCUS       XP_040941302             528 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ZFP1 [Gossypium hirsutum].
ACCESSION   XP_040941302
VERSION     XP_040941302.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085368.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..528
                     /product="probable E3 ubiquitin-protein ligase ZFP1"
                     /calculated_mol_wt=57799
     Region          474..520
                     /region_name="RING-H2_RNF24-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF24, RNF122, and similar proteins; cd16469"
                     /db_xref="CDD:438132"
     CDS             1..528
                     /gene="LOC107895246"
                     /coded_by="XM_041085368.1:261..1847"
                     /db_xref="GeneID:107895246"
ORIGIN      
        1 mgqrnmlcpn qmidlemdqq gqgylhpepc ifmggrpnyp ppdiqmgvta pgnatsldth
       61 plpehydsgm fyglpqypgv qhhnhspnld lgigsasnyy ipyvanpsss apvnhgpadq
      121 mpsssnfnll gvsaneyarn chfmdnvsgs ykrknsegvp gnfphfnaps sssssvtpls
      181 srhpdgvgtm dgasfnipqy rgngpptire agpqrsvrnr lgatpvepvl mhsanhvfqg
      241 nyirqpfqpt itdggasawt qvpgvpymhg snvgapmets lrsstnfsha splelrnhnf
      301 hhpappiegv rghsinihpq vaavpprfpa syasqssmnl shdgwemgrr hlgpvppsgf
      361 rlyhsrresg ivpettvrhr nlphlrvlpp dgvavlelpe fyevgnfidh hrdmrldied
      421 msyeellalg erignvntgl seetitsklk trsystfatt inleeaapid qepdscivcq
      481 edyknqekig tldcgheyha gclkkwlvvk nvcpicksea iatesknv
//
LOCUS       XP_040941303             528 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ZFP1 [Gossypium hirsutum].
ACCESSION   XP_040941303
VERSION     XP_040941303.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085369.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..528
                     /product="probable E3 ubiquitin-protein ligase ZFP1"
                     /calculated_mol_wt=57799
     Region          474..520
                     /region_name="RING-H2_RNF24-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF24, RNF122, and similar proteins; cd16469"
                     /db_xref="CDD:438132"
     CDS             1..528
                     /gene="LOC107895246"
                     /coded_by="XM_041085369.1:209..1795"
                     /db_xref="GeneID:107895246"
ORIGIN      
        1 mgqrnmlcpn qmidlemdqq gqgylhpepc ifmggrpnyp ppdiqmgvta pgnatsldth
       61 plpehydsgm fyglpqypgv qhhnhspnld lgigsasnyy ipyvanpsss apvnhgpadq
      121 mpsssnfnll gvsaneyarn chfmdnvsgs ykrknsegvp gnfphfnaps sssssvtpls
      181 srhpdgvgtm dgasfnipqy rgngpptire agpqrsvrnr lgatpvepvl mhsanhvfqg
      241 nyirqpfqpt itdggasawt qvpgvpymhg snvgapmets lrsstnfsha splelrnhnf
      301 hhpappiegv rghsinihpq vaavpprfpa syasqssmnl shdgwemgrr hlgpvppsgf
      361 rlyhsrresg ivpettvrhr nlphlrvlpp dgvavlelpe fyevgnfidh hrdmrldied
      421 msyeellalg erignvntgl seetitsklk trsystfatt inleeaapid qepdscivcq
      481 edyknqekig tldcgheyha gclkkwlvvk nvcpicksea iatesknv
//
LOCUS       XP_016676018             528 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ZFP1 [Gossypium hirsutum].
ACCESSION   XP_016676018
VERSION     XP_016676018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820529.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..528
                     /product="probable E3 ubiquitin-protein ligase ZFP1"
                     /calculated_mol_wt=57799
     Region          474..520
                     /region_name="RING-H2_RNF24-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF24, RNF122, and similar proteins; cd16469"
                     /db_xref="CDD:438132"
     CDS             1..528
                     /gene="LOC107895246"
                     /coded_by="XM_016820529.2:432..2018"
                     /db_xref="GeneID:107895246"
ORIGIN      
        1 mgqrnmlcpn qmidlemdqq gqgylhpepc ifmggrpnyp ppdiqmgvta pgnatsldth
       61 plpehydsgm fyglpqypgv qhhnhspnld lgigsasnyy ipyvanpsss apvnhgpadq
      121 mpsssnfnll gvsaneyarn chfmdnvsgs ykrknsegvp gnfphfnaps sssssvtpls
      181 srhpdgvgtm dgasfnipqy rgngpptire agpqrsvrnr lgatpvepvl mhsanhvfqg
      241 nyirqpfqpt itdggasawt qvpgvpymhg snvgapmets lrsstnfsha splelrnhnf
      301 hhpappiegv rghsinihpq vaavpprfpa syasqssmnl shdgwemgrr hlgpvppsgf
      361 rlyhsrresg ivpettvrhr nlphlrvlpp dgvavlelpe fyevgnfidh hrdmrldied
      421 msyeellalg erignvntgl seetitsklk trsystfatt inleeaapid qepdscivcq
      481 edyknqekig tldcgheyha gclkkwlvvk nvcpicksea iatesknv
//
LOCUS       XP_016676015             217 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: ras-related protein RABA1f [Gossypium
            hirsutum].
ACCESSION   XP_016676015
VERSION     XP_016676015.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820526.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676015.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..217
                     /product="LOW QUALITY PROTEIN: ras-related protein RABA1f"
                     /calculated_mol_wt=23789
     Region          11..175
                     /region_name="Rab11_like"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; cd01868"
                     /db_xref="CDD:206660"
     Site            11..15
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206660"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206660"
     Site            order(22..28,39,42,45,71,126..127,129,156..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206660"
     Site            order(28..39,41..44)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206660"
     Site            order(38,43..51)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206660"
     Site            order(43,47..54,61,63)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            45
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206660"
     Site            order(46,48..50,65,67,74..75,78,82,84..87,174)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     Site            order(46..47,49,67..68,75,77,79..81)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            46..50
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206660"
     Site            63..67
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206660"
     Site            68..71
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206660"
     Site            order(71,73..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206660"
     Site            74..79
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206660"
     Site            82..86
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206660"
     Site            91..96
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206660"
     Site            119..123
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206660"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206660"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206660"
     Site            172..175
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206660"
     CDS             1..217
                     /gene="LOC107895245"
                     /coded_by="XM_016820526.2:139..792"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:107895245"
ORIGIN      
        1 maayradddy dylfkvvlig dsgvgksnll srftrnefsl eskstigvef atrsirvddk
       61 vvkaqiwdta gqeryraits ayyrgavgal lvydvtrhvt fenverwlke lrghtdsniv
      121 imlvgnkadl xhlravstdd akafaerent ffmetsales mnvetaftev ltqihhvvsr
      181 kalevgddpa alpkgrtinv gskddvsavk nagccsa
//
LOCUS       XP_016676013             319 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 34 [Gossypium hirsutum].
ACCESSION   XP_016676013
VERSION     XP_016676013.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820524.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676013.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..319
                     /product="basic leucine zipper 34"
                     /calculated_mol_wt=35741
     Region          180..230
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          180..230
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(183..184,186..188,190..195,197..199)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(198,201..202,205..206,208..209,212..213,215..216,
                     219..220,222..223,226..227,229..230)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     CDS             1..319
                     /gene="LOC107895244"
                     /coded_by="XM_016820524.2:481..1440"
                     /db_xref="GeneID:107895244"
ORIGIN      
        1 maelppkipn isqnwpsfph dkmpsmanff pstitnhpsw vdefldfssa rrgahrrsms
       61 dsiafleqpl veeecrdsna mpmmttttvs nlntfdrldd dqlmslfsdd iavtmaasap
      121 tvsssnpstp tssnneekta pstdlqqpkn epgevestrk lsaseappss ngdsiidpkr
      181 vkrilanrqs aqrsrvrklq yisqlersvt tlqtevsals prvafldhqr lilnvdnsal
      241 kqriaalaqd kifkdahqea lkkeierlrq vyqqqqnlkn mnttttnrha lpsqqqqppp
      301 ssppppqnee qldqrkres
//
LOCUS       XP_016676010             384 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF5, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016676010
VERSION     XP_016676010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820521.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..384
                     /product="transcription termination factor MTERF5,
                     chloroplastic"
                     /calculated_mol_wt=43965
     Region          76..341
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..384
                     /gene="LOC107895242"
                     /coded_by="XM_016820521.2:331..1485"
                     /db_xref="GeneID:107895242"
ORIGIN      
        1 mqtlksssif ssfrllkpns fiviqyfsas ssvtvapnpp lfnylvkdln fdeiqafsis
       61 nrfrkvksle ktqsavnflq slgfsnaqia ssarlapqil fadvenvlrp kikffqdlgl
      121 mephipkffs mnstlltcsl dkklipsvql vkkvlgnnne dlfkvfsrcn gfiardsilk
      181 lsrnieyles cgivgsqlsm llrrqprifr mrestlrnlv sraldmgfst dsrmlvhaih
      241 tmnclsektf kkkwellksc gfsendcatm frkapglfrv seeklklgie ffinaakfnk
      301 divasnpfll mysledrvip ryrvmqiiks kmllkkdrsf lyildqteie flkfisrftd
      361 dveelliayk ahlfptssse eeat
//
LOCUS       XP_016676012             290 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPEAR2 [Gossypium hirsutum].
ACCESSION   XP_016676012
VERSION     XP_016676012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820523.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..290
                     /product="protein SPEAR2"
                     /calculated_mol_wt=31483
     CDS             1..290
                     /gene="LOC107895243"
                     /coded_by="XM_016820523.2:360..1232"
                     /db_xref="GeneID:107895243"
ORIGIN      
        1 measkseden qtqrcrntts sgggignnni grsfkkqrpk kvlqrglgva qlekirneee
       61 eeqkkhaavl spptvshkss yvplpipsfh lsnqssssss vpfpastgga llpvngsvkn
      121 ghnlwsscec diekeccgld pglvfnttfq qssssmvnnl tsrnsstsll nyqmeppsnq
      181 syygnctcll pehdkvigmn rscplsldna pptsihnkyp smvrsitgev eatsssngsg
      241 fnfepetlny rkgrccstsn gvfdgdshis sshnyfkfkm qalsihfnqs
//
LOCUS       XP_016676007             409 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TCP4 [Gossypium hirsutum].
ACCESSION   XP_016676007
VERSION     XP_016676007.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820518.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676007.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..409
                     /product="transcription factor TCP4"
                     /calculated_mol_wt=44134
     Region          36..>96
                     /region_name="TCP"
                     /note="TCP family transcription factor; pfam03634"
                     /db_xref="CDD:460998"
     CDS             1..409
                     /gene="LOC107895241"
                     /coded_by="XM_016820518.2:551..1780"
                     /db_xref="GeneID:107895241"
ORIGIN      
        1 mgesnqqaat ssrlglkhsg geivevqggh ivrsigrkdr hskvctakgp rdrrvrlsah
       61 taiqfydvqd rlgydrpska vdwlikkaks aidelaelpp wnpqtlkttt sttkqnnqqd
      121 qniitavdne kprrtatlmg nqvqilqqqg tgdnpnsnsg flpsslvsde iadtmkssfp
      181 lgasseapss siqfqnyppd flsktsshsq dlrlslqsfp epvllhhhhq aaaaqahqte
      241 svlfsagtsp lagfdgssag wenhhhhpae igrfqrlvaw nngaaaadtg sgggggmggf
      301 lfgnpsappl spafgqngqf ffqrgplqss ntplvrawid qpipttdeyh hhhhqipqni
      361 hhqpalsgie fttsgvfsgf rvparfqgaq edqdsiankl ssassdshh
//
LOCUS       XP_016676008             409 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TCP4 [Gossypium hirsutum].
ACCESSION   XP_016676008
VERSION     XP_016676008.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820519.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676008.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..409
                     /product="transcription factor TCP4"
                     /calculated_mol_wt=44134
     Region          36..>96
                     /region_name="TCP"
                     /note="TCP family transcription factor; pfam03634"
                     /db_xref="CDD:460998"
     CDS             1..409
                     /gene="LOC107895241"
                     /coded_by="XM_016820519.2:605..1834"
                     /db_xref="GeneID:107895241"
ORIGIN      
        1 mgesnqqaat ssrlglkhsg geivevqggh ivrsigrkdr hskvctakgp rdrrvrlsah
       61 taiqfydvqd rlgydrpska vdwlikkaks aidelaelpp wnpqtlkttt sttkqnnqqd
      121 qniitavdne kprrtatlmg nqvqilqqqg tgdnpnsnsg flpsslvsde iadtmkssfp
      181 lgasseapss siqfqnyppd flsktsshsq dlrlslqsfp epvllhhhhq aaaaqahqte
      241 svlfsagtsp lagfdgssag wenhhhhpae igrfqrlvaw nngaaaadtg sgggggmggf
      301 lfgnpsappl spafgqngqf ffqrgplqss ntplvrawid qpipttdeyh hhhhqipqni
      361 hhqpalsgie fttsgvfsgf rvparfqgaq edqdsiankl ssassdshh
//
LOCUS       XP_016676009             409 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TCP4 [Gossypium hirsutum].
ACCESSION   XP_016676009
VERSION     XP_016676009.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820520.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676009.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..409
                     /product="transcription factor TCP4"
                     /calculated_mol_wt=44134
     Region          36..>96
                     /region_name="TCP"
                     /note="TCP family transcription factor; pfam03634"
                     /db_xref="CDD:460998"
     CDS             1..409
                     /gene="LOC107895241"
                     /coded_by="XM_016820520.2:547..1776"
                     /db_xref="GeneID:107895241"
ORIGIN      
        1 mgesnqqaat ssrlglkhsg geivevqggh ivrsigrkdr hskvctakgp rdrrvrlsah
       61 taiqfydvqd rlgydrpska vdwlikkaks aidelaelpp wnpqtlkttt sttkqnnqqd
      121 qniitavdne kprrtatlmg nqvqilqqqg tgdnpnsnsg flpsslvsde iadtmkssfp
      181 lgasseapss siqfqnyppd flsktsshsq dlrlslqsfp epvllhhhhq aaaaqahqte
      241 svlfsagtsp lagfdgssag wenhhhhpae igrfqrlvaw nngaaaadtg sgggggmggf
      301 lfgnpsappl spafgqngqf ffqrgplqss ntplvrawid qpipttdeyh hhhhqipqni
      361 hhqpalsgie fttsgvfsgf rvparfqgaq edqdsiankl ssassdshh
//
LOCUS       XP_016676004             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676004
VERSION     XP_016676004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820515.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..308
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=34740
     Region          <164..>260
                     /region_name="PEARLI-4"
                     /note="Arabidopsis phospholipase-like protein (PEARLI 4);
                     pfam05278"
                     /db_xref="CDD:253129"
     CDS             1..308
                     /gene="LOC107895239"
                     /coded_by="XM_016820515.2:453..1379"
                     /db_xref="GeneID:107895239"
ORIGIN      
        1 mhsrvsnhea snkqigckge lrkiqkknnk nkseardqql kkkefqslts engnleelie
       61 cliagyrqvp atdlqkqeis vdlsyshphf dvkneeqgmk sdvegnaeel dglelddlrd
      121 dnpensliiq pntiaefllk idedvasnvd fsdfmicfng eqktigrysf pislvptver
      181 imntygdvsa sspmntnitg kiyllfcaai kemedlelhq vtetkmlkwr daikdalrvn
      241 fkvefamshl kkiaqayfgg igeqvlltin eklnslyker dkalegfkdf latakdfdgq
      301 svstglfp
//
LOCUS       XP_016676005             285 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676005
VERSION     XP_016676005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820516.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..285
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=32356
     CDS             1..285
                     /gene="LOC107895239"
                     /coded_by="XM_016820516.2:392..1249"
                     /db_xref="GeneID:107895239"
ORIGIN      
        1 mhsrvsnhea snkqigckge lrkiqkknnk nkseardqql kkkefqslts engnleelie
       61 cliagyrqvp atdlqkqeis vdlsyshphf dvkneeqgmk sdvegnaeel dglelddlrd
      121 dnpensliiq pntiaefllk idedvasnvd fsdfmicfng eqktigrysf pislvptver
      181 imntyaikem edlelhqvte tkmlkwrdai kdalrvnfkv efamshlkki aqayfggige
      241 qvlltinekl nslykerdka legfkdflat akdfdgqsvs tglfp
//
LOCUS       XP_040941304            1412 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941304
VERSION     XP_040941304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085370.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1412
                     /product="increased DNA methylation 1 isoform X1"
                     /calculated_mol_wt=156528
     Region          899..950
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          977..1016
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(982..988,990,998,1006..1011)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          1017..1065
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(1017,1032..1034,1039,1043,1063)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276994"
     Region          <1166..1257
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
     CDS             1..1412
                     /gene="LOC107895236"
                     /coded_by="XM_041085370.1:354..4592"
                     /db_xref="GeneID:107895236"
ORIGIN      
        1 malfmpnssf vacftalvsn lkmgnsatag sifsgsvkag mhltemsfst yfedmhddgf
       61 egshddhsis tevfskndtg riskrclvtg atnfkgiksp easlcsysas savtslscsk
      121 tlcqevsnla ndncgwvsal gsfperyala erddqnasfk rmklstgevs rgeaqkkkal
      181 saplqqkeiv sglsstptns vcqrvmpylv essavetekg aemedvdvtk sriqdsgase
      241 gkevvvgiai aspvseesfa skvvvsspet alvkfesplc tlerfnlcqs fgvdgsnisg
      301 atvskkdprp llqshvfhvl kgagwsierk krpsrsymdt vyrspegrlf refpkvwrfc
      361 gevlladkyd fmlendgkkw tdmiqfwsdl letllnieke inrtnlsnal alhwtlldpf
      421 vtvvfinrki gslrkgdevk agrslviekn kkndtvlahr kkvtmrkfcs qgmmptqhcd
      481 sslaaksslt vpkrsydsse elsgngslsk fygkmssgav kclkdvsnmt dqegsylvdt
      541 anrletfgce fkslhivssh acgsdntygq lvssqfiypv asgdvtnmlh gfksvsphqd
      601 sntispsfgk qmslcngetl nevpgdvsfd sqeekdktsg aldagnvrnf pqhllddhps
      661 ypsdsliqsg dgedqfeksa ealkfeinne ncaqnailkk karrrsrkis eislttsyqs
      721 dvlcsytpdm seqdidscqa dlnskeiqks fetkgslqks sspgpslcqv ekrgsnfkri
      781 ccnrdgsesr kkkstecqie dddllvsaii rnkdlslgat rsklkapkvr aqtkfkrkrg
      841 rprllprvkg kgrkhvtkik lnnvgsrtvl swlilagvis lndviqsrnp yddaivkdgf
      901 vslegitckc cnrvlsvsef knhagfkfnr pclnlfmesg kpftlcqlqa wsaeyktkkk
      961 girkveaden drnddscglc gdggeliccd ncpstfhlac lsmqelpegd wycsnctcwi
     1021 cgnfvndkea snlfdafkcs qcehkyhkec lndkfqfkek eswlcggsce elysglssrl
     1081 gminhlpdgf swtllkcihe dqkvytaqwf alkaecnskl avalsimeec fqsmvdprtg
     1141 vdmipqllyn wgsdfarlnf fgfyslvlek ddvlisvasi rihgvtvaem pliatcinyr
     1201 rqgmcrrlmn vieemlisfk veklvitaip nlvetwtkgf gftpveeder kmlkkinlmv
     1261 fpgtillkkp lyrestdivi hsvgdqpvyk anaeigtela gdknlqesei dgmkeikttd
     1321 agevvekptl rvtettrlgi ctagepvney dqcsdhnrcs aepddrlnvg pcretpaaei
     1381 nsaaqfescg gdneagnepk aefkqqlvek qw
//
LOCUS       XP_040941305            1372 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941305
VERSION     XP_040941305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085371.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1372
                     /product="increased DNA methylation 1 isoform X2"
                     /calculated_mol_wt=152531
     Region          859..910
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          937..976
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(942..948,950,958,966..971)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          977..1025
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(977,992..994,999,1003,1023)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <1126..1217
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
     CDS             1..1372
                     /gene="LOC107895236"
                     /coded_by="XM_041085371.1:2474..6592"
                     /db_xref="GeneID:107895236"
ORIGIN      
        1 mhltemsfst yfedmhddgf egshddhsis tevfskndtg riskrclvtg atnfkgiksp
       61 easlcsysas savtslscsk tlcqevsnla ndncgwvsal gsfperyala erddqnasfk
      121 rmklstgevs rgeaqkkkal saplqqkeiv sglsstptns vcqrvmpylv essavetekg
      181 aemedvdvtk sriqdsgase gkevvvgiai aspvseesfa skvvvsspet alvkfesplc
      241 tlerfnlcqs fgvdgsnisg atvskkdprp llqshvfhvl kgagwsierk krpsrsymdt
      301 vyrspegrlf refpkvwrfc gevlladkyd fmlendgkkw tdmiqfwsdl letllnieke
      361 inrtnlsnal alhwtlldpf vtvvfinrki gslrkgdevk agrslviekn kkndtvlahr
      421 kkvtmrkfcs qgmmptqhcd sslaaksslt vpkrsydsse elsgngslsk fygkmssgav
      481 kclkdvsnmt dqegsylvdt anrletfgce fkslhivssh acgsdntygq lvssqfiypv
      541 asgdvtnmlh gfksvsphqd sntispsfgk qmslcngetl nevpgdvsfd sqeekdktsg
      601 aldagnvrnf pqhllddhps ypsdsliqsg dgedqfeksa ealkfeinne ncaqnailkk
      661 karrrsrkis eislttsyqs dvlcsytpdm seqdidscqa dlnskeiqks fetkgslqks
      721 sspgpslcqv ekrgsnfkri ccnrdgsesr kkkstecqie dddllvsaii rnkdlslgat
      781 rsklkapkvr aqtkfkrkrg rprllprvkg kgrkhvtkik lnnvgsrtvl swlilagvis
      841 lndviqsrnp yddaivkdgf vslegitckc cnrvlsvsef knhagfkfnr pclnlfmesg
      901 kpftlcqlqa wsaeyktkkk girkveaden drnddscglc gdggeliccd ncpstfhlac
      961 lsmqelpegd wycsnctcwi cgnfvndkea snlfdafkcs qcehkyhkec lndkfqfkek
     1021 eswlcggsce elysglssrl gminhlpdgf swtllkcihe dqkvytaqwf alkaecnskl
     1081 avalsimeec fqsmvdprtg vdmipqllyn wgsdfarlnf fgfyslvlek ddvlisvasi
     1141 rihgvtvaem pliatcinyr rqgmcrrlmn vieemlisfk veklvitaip nlvetwtkgf
     1201 gftpveeder kmlkkinlmv fpgtillkkp lyrestdivi hsvgdqpvyk anaeigtela
     1261 gdknlqesei dgmkeikttd agevvekptl rvtettrlgi ctagepvney dqcsdhnrcs
     1321 aepddrlnvg pcretpaaei nsaaqfescg gdneagnepk aefkqqlvek qw
//
LOCUS       XP_040941306            1372 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941306
VERSION     XP_040941306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085372.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1372
                     /product="increased DNA methylation 1 isoform X2"
                     /calculated_mol_wt=152531
     Region          859..910
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          937..976
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(942..948,950,958,966..971)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          977..1025
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(977,992..994,999,1003,1023)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <1126..1217
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
     CDS             1..1372
                     /gene="LOC107895236"
                     /coded_by="XM_041085372.1:1268..5386"
                     /db_xref="GeneID:107895236"
ORIGIN      
        1 mhltemsfst yfedmhddgf egshddhsis tevfskndtg riskrclvtg atnfkgiksp
       61 easlcsysas savtslscsk tlcqevsnla ndncgwvsal gsfperyala erddqnasfk
      121 rmklstgevs rgeaqkkkal saplqqkeiv sglsstptns vcqrvmpylv essavetekg
      181 aemedvdvtk sriqdsgase gkevvvgiai aspvseesfa skvvvsspet alvkfesplc
      241 tlerfnlcqs fgvdgsnisg atvskkdprp llqshvfhvl kgagwsierk krpsrsymdt
      301 vyrspegrlf refpkvwrfc gevlladkyd fmlendgkkw tdmiqfwsdl letllnieke
      361 inrtnlsnal alhwtlldpf vtvvfinrki gslrkgdevk agrslviekn kkndtvlahr
      421 kkvtmrkfcs qgmmptqhcd sslaaksslt vpkrsydsse elsgngslsk fygkmssgav
      481 kclkdvsnmt dqegsylvdt anrletfgce fkslhivssh acgsdntygq lvssqfiypv
      541 asgdvtnmlh gfksvsphqd sntispsfgk qmslcngetl nevpgdvsfd sqeekdktsg
      601 aldagnvrnf pqhllddhps ypsdsliqsg dgedqfeksa ealkfeinne ncaqnailkk
      661 karrrsrkis eislttsyqs dvlcsytpdm seqdidscqa dlnskeiqks fetkgslqks
      721 sspgpslcqv ekrgsnfkri ccnrdgsesr kkkstecqie dddllvsaii rnkdlslgat
      781 rsklkapkvr aqtkfkrkrg rprllprvkg kgrkhvtkik lnnvgsrtvl swlilagvis
      841 lndviqsrnp yddaivkdgf vslegitckc cnrvlsvsef knhagfkfnr pclnlfmesg
      901 kpftlcqlqa wsaeyktkkk girkveaden drnddscglc gdggeliccd ncpstfhlac
      961 lsmqelpegd wycsnctcwi cgnfvndkea snlfdafkcs qcehkyhkec lndkfqfkek
     1021 eswlcggsce elysglssrl gminhlpdgf swtllkcihe dqkvytaqwf alkaecnskl
     1081 avalsimeec fqsmvdprtg vdmipqllyn wgsdfarlnf fgfyslvlek ddvlisvasi
     1141 rihgvtvaem pliatcinyr rqgmcrrlmn vieemlisfk veklvitaip nlvetwtkgf
     1201 gftpveeder kmlkkinlmv fpgtillkkp lyrestdivi hsvgdqpvyk anaeigtela
     1261 gdknlqesei dgmkeikttd agevvekptl rvtettrlgi ctagepvney dqcsdhnrcs
     1321 aepddrlnvg pcretpaaei nsaaqfescg gdneagnepk aefkqqlvek qw
//
LOCUS       XP_040941307            1372 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941307
VERSION     XP_040941307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085373.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1372
                     /product="increased DNA methylation 1 isoform X2"
                     /calculated_mol_wt=152531
     Region          859..910
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          937..976
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(942..948,950,958,966..971)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          977..1025
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(977,992..994,999,1003,1023)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <1126..1217
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
     CDS             1..1372
                     /gene="LOC107895236"
                     /coded_by="XM_041085373.1:1187..5305"
                     /db_xref="GeneID:107895236"
ORIGIN      
        1 mhltemsfst yfedmhddgf egshddhsis tevfskndtg riskrclvtg atnfkgiksp
       61 easlcsysas savtslscsk tlcqevsnla ndncgwvsal gsfperyala erddqnasfk
      121 rmklstgevs rgeaqkkkal saplqqkeiv sglsstptns vcqrvmpylv essavetekg
      181 aemedvdvtk sriqdsgase gkevvvgiai aspvseesfa skvvvsspet alvkfesplc
      241 tlerfnlcqs fgvdgsnisg atvskkdprp llqshvfhvl kgagwsierk krpsrsymdt
      301 vyrspegrlf refpkvwrfc gevlladkyd fmlendgkkw tdmiqfwsdl letllnieke
      361 inrtnlsnal alhwtlldpf vtvvfinrki gslrkgdevk agrslviekn kkndtvlahr
      421 kkvtmrkfcs qgmmptqhcd sslaaksslt vpkrsydsse elsgngslsk fygkmssgav
      481 kclkdvsnmt dqegsylvdt anrletfgce fkslhivssh acgsdntygq lvssqfiypv
      541 asgdvtnmlh gfksvsphqd sntispsfgk qmslcngetl nevpgdvsfd sqeekdktsg
      601 aldagnvrnf pqhllddhps ypsdsliqsg dgedqfeksa ealkfeinne ncaqnailkk
      661 karrrsrkis eislttsyqs dvlcsytpdm seqdidscqa dlnskeiqks fetkgslqks
      721 sspgpslcqv ekrgsnfkri ccnrdgsesr kkkstecqie dddllvsaii rnkdlslgat
      781 rsklkapkvr aqtkfkrkrg rprllprvkg kgrkhvtkik lnnvgsrtvl swlilagvis
      841 lndviqsrnp yddaivkdgf vslegitckc cnrvlsvsef knhagfkfnr pclnlfmesg
      901 kpftlcqlqa wsaeyktkkk girkveaden drnddscglc gdggeliccd ncpstfhlac
      961 lsmqelpegd wycsnctcwi cgnfvndkea snlfdafkcs qcehkyhkec lndkfqfkek
     1021 eswlcggsce elysglssrl gminhlpdgf swtllkcihe dqkvytaqwf alkaecnskl
     1081 avalsimeec fqsmvdprtg vdmipqllyn wgsdfarlnf fgfyslvlek ddvlisvasi
     1141 rihgvtvaem pliatcinyr rqgmcrrlmn vieemlisfk veklvitaip nlvetwtkgf
     1201 gftpveeder kmlkkinlmv fpgtillkkp lyrestdivi hsvgdqpvyk anaeigtela
     1261 gdknlqesei dgmkeikttd agevvekptl rvtettrlgi ctagepvney dqcsdhnrcs
     1321 aepddrlnvg pcretpaaei nsaaqfescg gdneagnepk aefkqqlvek qw
//
LOCUS       XP_040941308            1372 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941308
VERSION     XP_040941308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085374.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1372
                     /product="increased DNA methylation 1 isoform X2"
                     /calculated_mol_wt=152531
     Region          859..910
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          937..976
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(942..948,950,958,966..971)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          977..1025
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(977,992..994,999,1003,1023)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <1126..1217
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
     CDS             1..1372
                     /gene="LOC107895236"
                     /coded_by="XM_041085374.1:1541..5659"
                     /db_xref="GeneID:107895236"
ORIGIN      
        1 mhltemsfst yfedmhddgf egshddhsis tevfskndtg riskrclvtg atnfkgiksp
       61 easlcsysas savtslscsk tlcqevsnla ndncgwvsal gsfperyala erddqnasfk
      121 rmklstgevs rgeaqkkkal saplqqkeiv sglsstptns vcqrvmpylv essavetekg
      181 aemedvdvtk sriqdsgase gkevvvgiai aspvseesfa skvvvsspet alvkfesplc
      241 tlerfnlcqs fgvdgsnisg atvskkdprp llqshvfhvl kgagwsierk krpsrsymdt
      301 vyrspegrlf refpkvwrfc gevlladkyd fmlendgkkw tdmiqfwsdl letllnieke
      361 inrtnlsnal alhwtlldpf vtvvfinrki gslrkgdevk agrslviekn kkndtvlahr
      421 kkvtmrkfcs qgmmptqhcd sslaaksslt vpkrsydsse elsgngslsk fygkmssgav
      481 kclkdvsnmt dqegsylvdt anrletfgce fkslhivssh acgsdntygq lvssqfiypv
      541 asgdvtnmlh gfksvsphqd sntispsfgk qmslcngetl nevpgdvsfd sqeekdktsg
      601 aldagnvrnf pqhllddhps ypsdsliqsg dgedqfeksa ealkfeinne ncaqnailkk
      661 karrrsrkis eislttsyqs dvlcsytpdm seqdidscqa dlnskeiqks fetkgslqks
      721 sspgpslcqv ekrgsnfkri ccnrdgsesr kkkstecqie dddllvsaii rnkdlslgat
      781 rsklkapkvr aqtkfkrkrg rprllprvkg kgrkhvtkik lnnvgsrtvl swlilagvis
      841 lndviqsrnp yddaivkdgf vslegitckc cnrvlsvsef knhagfkfnr pclnlfmesg
      901 kpftlcqlqa wsaeyktkkk girkveaden drnddscglc gdggeliccd ncpstfhlac
      961 lsmqelpegd wycsnctcwi cgnfvndkea snlfdafkcs qcehkyhkec lndkfqfkek
     1021 eswlcggsce elysglssrl gminhlpdgf swtllkcihe dqkvytaqwf alkaecnskl
     1081 avalsimeec fqsmvdprtg vdmipqllyn wgsdfarlnf fgfyslvlek ddvlisvasi
     1141 rihgvtvaem pliatcinyr rqgmcrrlmn vieemlisfk veklvitaip nlvetwtkgf
     1201 gftpveeder kmlkkinlmv fpgtillkkp lyrestdivi hsvgdqpvyk anaeigtela
     1261 gdknlqesei dgmkeikttd agevvekptl rvtettrlgi ctagepvney dqcsdhnrcs
     1321 aepddrlnvg pcretpaaei nsaaqfescg gdneagnepk aefkqqlvek qw
//
LOCUS       XP_016675999             153 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 [Gossypium hirsutum].
ACCESSION   XP_016675999
VERSION     XP_016675999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="ubiquitin-conjugating enzyme E2 36"
                     /calculated_mol_wt=17089
     Region          6..149
                     /region_name="UBCc_UBE2N"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; cd23813"
                     /db_xref="CDD:467433"
     CDS             1..153
                     /gene="LOC107895234"
                     /coded_by="XM_016820510.2:176..637"
                     /db_xref="GeneID:107895234"
ORIGIN      
        1 mansnlprri iketqrllse papgisasps ednmryfnvm ilgptqspye ggvfklelfl
       61 peeypmaapk vrfltkiyhp nidklgricl dilkdkwspa lqirtvllsi qallsapnpd
      121 dplseniakh wktneaeave takewtrlya sga
//
LOCUS       XP_016675997             579 aa            linear   PLN 06-AUG-2024
DEFINITION  dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
            [Gossypium hirsutum].
ACCESSION   XP_016675997
VERSION     XP_016675997.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820508.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..579
                     /product="dol-P-Man:Man(6)GlcNAc(2)-PP-Dol
                     alpha-1,2-mannosyltransferase"
                     /calculated_mol_wt=65457
     Region          52..458
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..579
                     /gene="LOC107895232"
                     /coded_by="XM_016820508.2:207..1946"
                     /db_xref="GeneID:107895232"
ORIGIN      
        1 msfstrqrra tvsdlpssss ppqpskpesy tkvdkpgrss sdgvgedrgl gwftvlfalg
       61 mlrymsatsn iihdcdevfn yweplhylly ksgfqtweys sefalrsyly iifhelvgrp
      121 aswlfaeekv rvfyavrlfl gflslisdat lvvalsrkyg krlasyalam lclasgcffa
      181 stsflpssfs myamslssgl fllekpawav avaavgvilg wpfsilaflp ltfyslakqf
      241 kqaflsgavt siallalsvl vdhcyyqrwt ssvfnllvyn vlgggeshly gtegplfyir
      301 ngfnnfnfcf ilallflgil piarkkyapd llivisplyi wlafmslqph keerflypiy
      361 plvcvaasav iesfpdlfrd kynpydnsii vmmakflrpv alslilcash srtfslingy
      421 aapmevykil ehhddagtgs vlcvgsewhr ypssffvpdy igevrwiddg frgllpfpfn
      481 dtlggtaaap pyfnnknkas deqylrdiea ctflvelqln rpfpyrgndl sawepiaalp
      541 yldrelspak yrsffipylw qeknvfgmyk llrrvskpe
//
LOCUS       XP_016675998             486 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016675998
VERSION     XP_016675998.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820509.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase 2"
                     /calculated_mol_wt=51804
     Region          40..462
                     /region_name="MurA"
                     /note="UDP-N-acetylglucosamine enolpyruvyl transferase
                     [Cell wall/membrane/envelope biogenesis]; COG0766"
                     /db_xref="CDD:440529"
     CDS             1..486
                     /gene="LOC107895233"
                     /coded_by="XM_016820509.2:148..1608"
                     /db_xref="GeneID:107895233"
ORIGIN      
        1 malscsntlf pkpfvtscss qtqgthfsnl pqptkqdpif kikgpstlsg hitvsgskna
       61 slpllaatlc csgtsllhnl pnvsdiqama silsslgakv dafdgkmmvn sdgvgkvevd
      121 leemkkirgg ffvigplvar fgeavvalpg gcnigkrpvd lhlrglralg avvelrdgkv
      181 waraangrgl vggkfrldyp svgatetlmm aasmadgttv lsnvakepev vdlarfltdc
      241 gawiegagsd nliirgkrql ygsecvikpd rietgtfmla aaitrscilm spvipsrvsc
      301 lidklsqagc kisrldqqtl qvsahpshig ydlksfdikt npfpgfptdl qpqtmalltt
      361 ctgsslvees vfdnrmthar elqklgariq vsgsnalvyg fdegsalegs rviardlrgg
      421 vsiilaglaa kgttqihdia hiergyenid mklqnlgadi qrlthtsaps fitflhfkha
      481 prfafh
//
LOCUS       XP_040941309             969 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoenolpyruvate carboxylase [Gossypium hirsutum].
ACCESSION   XP_040941309
VERSION     XP_040941309.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085375.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..969
                     /product="phosphoenolpyruvate carboxylase"
                     /calculated_mol_wt=110623
     Region          42..969
                     /region_name="PEPcase"
                     /note="Phosphoenolpyruvate carboxylase; pfam00311"
                     /db_xref="CDD:425598"
     CDS             1..969
                     /gene="LOC107895337"
                     /coded_by="XM_041085375.1:222..3131"
                     /db_xref="GeneID:107895337"
ORIGIN      
        1 masfnnnnnn nnnngkfekl asidaqlrql vpakvseddk lveydallld rfldilqdlh
       61 gedlketvqe cyelsaeyeg knnpkkleel gnvltsldpg dsivvakafs hmlnlanlae
      121 evqiahrrri klkkgdfvde nnattesdle etlkrlvvdl kkspqevfda lknqtvdlvf
      181 tahptqsvrr sllqkhgrir nclaqlyakd itpddkqeld ealgreiqaa frtdeirrtp
      241 ptpqdemrag msyfhetvwk gvpkflrrvd talknigine rvpynapliq fsswmggdrd
      301 gnprvtpevt rdvcllarmm aanlyysqie dlmfelsmwr csdelrvrad elhrslrrda
      361 khyiefwkqi ppsepyrvil gdvrdklyqt rersrqllsh gmseipeeat ftnieqflep
      421 lelcyrslcc cgdrpiadgs lldflrqvst fglslvrldi rqesdrhtdv ldaitkhlei
      481 gsyrewseeq kqewllsels gkrplfgsdl pkteeiadil dtfnvlaelp adnfgayiis
      541 matapsdvla vellqrechv kqplrvvplf ekladleaap aalarlfsvd wyrnringkq
      601 evmigysdsg kdagrlsaaw qlykaqeeli kvakqfgmkl tmfhgrggtv grgggpthla
      661 ilsqppetih gslrvtvqge vieqsfgeeh lcfrtlqrft aatlehgmhp pvspkpewra
      721 lmdemaivat eeyrsivfke prfveyfrla tpeleygrmn igsrpskrkp sggieslrai
      781 pwifawtqtr fhlpvwlgfg aafkhaiekd iknlqmlqem ynewpffrvt idlvemvfak
      841 gdpgiaglyd kllvspelws fgerlrtnye etkclllqia ahkdllegdp ylkqrlrlrd
      901 syittlnvcq aytlkrirdp nynvkfrphi ckpadelvkl nptsdyapgl edtliltmkg
      961 iaagmqntg
//
LOCUS       XP_040941310             431 aa            linear   PLN 06-AUG-2024
DEFINITION  epidermis-specific secreted glycoprotein EP1 [Gossypium hirsutum].
ACCESSION   XP_040941310
VERSION     XP_040941310.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085376.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..431
                     /product="epidermis-specific secreted glycoprotein EP1"
                     /calculated_mol_wt=48496
     Region          39..155
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cd00028"
                     /db_xref="CDD:237995"
     Site            order(39..40,42,45,75,84..85,118,120,127,129,131,133..155)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(64,70,72,74,76,102,104,106,108,110,133,135,137,139,
                     141)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          351..428
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(370,372,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     CDS             1..431
                     /gene="LOC107895336"
                     /coded_by="XM_041085376.1:99..1394"
                     /db_xref="GeneID:107895336"
ORIGIN      
        1 mrliflflft vffiakatvp psetfqyvne gelgpyiiey dgnyralppf sapfqlcfyn
       61 ttpnaytlal rmgltrsesl frwvweanrg npvrenatlt fgsdgnlvla dvdgriawqt
      121 ntankgvtgf kvlpngnmvl hdskgnfiwq sfdyptdtll agqslrlgga tklvsrasam
      181 nnsdgpyslv meskalvlyy kasntprpil yfnheywvnv rkgpleyvkf dstseddegt
      241 ayglnleyqv ansstggtlr igrpnynstl sflrlgmdgn lkvytyydpv ldsawevtft
      301 lfsrdsfwss ecqlpercge lglcedsqcv acpspngllg wskdcdvkkl sscnekdfny
      361 ykldgvdhfm ttytrgnaik qdecgnkctk dckcmgyfyn qetsrcwmay dlktltrvan
      421 sthvayikap k
//
LOCUS       XP_016676131             604 aa            linear   PLN 06-AUG-2024
DEFINITION  peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
            [Gossypium hirsutum].
ACCESSION   XP_016676131
VERSION     XP_016676131.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820642.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676131.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..604
                     /product="peptide-N4-(N-acetyl-beta-
                     glucosaminyl)asparagine amidase A"
                     /calculated_mol_wt=69133
     Region          66..469
                     /region_name="PNGaseA"
                     /note="Peptide N-acetyl-beta-D-glucosaminyl asparaginase
                     amidase A; pfam12222"
                     /db_xref="CDD:403439"
     CDS             1..604
                     /gene="LOC107895330"
                     /coded_by="XM_016820642.2:952..2766"
                     /db_xref="GeneID:107895330"
ORIGIN      
        1 masslfslhf flllflyqpl fsmanlhktk nmilrsnhrs hlintipfne nsstvyfevt
       61 kpiklpntkp csyhvlhhdf gftygrppvv vnytrpacys qkftkivlew katckgtqfd
      121 rifgvwlsgv ellrgctaep tpkgiiwsve kditrynsll lknqtqtlav ylgnivdqty
      181 tgvyhvnltf hfypvecnvm inndenkisl nnlasnyysk adlilpisqd rslndglwfe
      241 vrnsnetksk qfqipenvyr avlevhisfh endefwygnf qndyiaannl sdtpgngpfr
      301 evviyldgev vgavwpftvi ytgginpsfw tpitgissfn lpsydieitp flgnmldgkp
      361 htlgfsvtna lnvwfidanl hlwldtrkak tegglvkfsn kaanvyeesd fkglngtflt
      421 yskrlisstg wikscygnit thsiqefryn nslqvakdgd fqvvdqmihf ndrvytkmpf
      481 hhvhveesfk tfhlnfyadf tvqgegsfif vsnvtlgfne nkykhggldf fisflrntqk
      541 aqsvievkny sttkrlrgtk qvyeyhgsdi cysrnisssn nlieydeggk lcddfevkpv
      601 kkai
//
LOCUS       XP_016676127             468 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676127
VERSION     XP_016676127.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820638.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676127.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..468
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=51149
     CDS             1..468
                     /gene="LOC107895325"
                     /coded_by="XM_016820638.2:634..2040"
                     /db_xref="GeneID:107895325"
ORIGIN      
        1 msversfeaw eevqrhgqdl adrlaqgftc liqshmipps fpwpnppksk lfdlefpsqs
       61 fgnkdfglpi dnsaifdigd ignmigqvga dfgaglnglv qqffrrlpip lraeesavvs
      121 vrgdmsvkgq kaevgvndme glvgfsdskd fgfvgneshs egvgdeeipg fnlksagllg
      181 rpqgiinits tfesrtrdle sslvargdlw rveasnanst srndnslfli qlgpvlfvrd
      241 ttlllpvhls kqhllwygyd rkngmhslcp avwskhrrwl lmsmlclnpl acsfvdlqfp
      301 ngqltyvsge glttsaflpl cggllqaqgq ypgemrysfs cknkwgtrit pmvlwpdksf
      361 alglsqalaw krsglmmkps iqfslcptfg gsnpglraev ihtvkdnlnl icgcslvahr
      421 aafasislgr skwngnvgns givvrvdtpl ssvgrpsfsv qinnvief
//
LOCUS       XP_016676128             393 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676128
VERSION     XP_016676128.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820639.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676128.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..393
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=43482
     CDS             1..393
                     /gene="LOC107895325"
                     /coded_by="XM_016820639.2:634..1815"
                     /db_xref="GeneID:107895325"
ORIGIN      
        1 msversfeaw eevqrhgqdl adrlaqgftc liqshmipps fpwpnppksk lfdlefpsqs
       61 fgnkdfglpi dnsaifdigd ignmigqvga dfgaglnglv qqffrrlpip lraeesavvs
      121 vrgdmsvkgq kaevgvndme glvgfsdskd fgfvgneshs egvgdeeipg fnlksagllg
      181 rpqgiinits tfesrtrdle sslvargdlw rveasnanst srndnslfli qlgpvlfvrd
      241 ttlllpvhls kqhllwygyd rkngmhslcp avwskhrrwl lmsmlclnpl acsfvdlqfp
      301 ngqltyvsge glttsaflpl cggllqaqgq ypgemrysfs cknkwgtrit pmvlwpdksf
      361 alglsqalaw krsglmmkps iqfrslpycl lhr
//
LOCUS       XP_016676124             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_016676124
VERSION     XP_016676124.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820635.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676124.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53053
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,361..362)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107895323"
                     /coded_by="XM_016820635.2:487..1974"
                     /db_xref="GeneID:107895323"
ORIGIN      
        1 mgtpaeskrr vafvlidglg dvsipkfgck tplqaanvpn ldaialagvs glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcgaldrmk lpsfpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelswei srilvshpln akrlaegkni anivllrgcg
      241 irievppfqk khdlwpcmva ptkiiaglgl sldinileap gatgdyrtli tskataiaka
      301 lsaplqtcpn vfvpgedehk pgrsdgydfg flhikaidda ghdkatvfkv kgleavdqai
      361 gqlaklmwqa estgnfqyfi cvtgdhstpv eygdhsfepv pfaicrlkdf vgaiggesvi
      421 lepsldpfpl ptvkagedln editlgkgrn ckqveslsgd svfefneiaa argalgrfpg
      481 gemmgiikrf lklsa
//
LOCUS       XP_016676125             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_016676125
VERSION     XP_016676125.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820636.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676125.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53053
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,361..362)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107895323"
                     /coded_by="XM_016820636.2:552..2039"
                     /db_xref="GeneID:107895323"
ORIGIN      
        1 mgtpaeskrr vafvlidglg dvsipkfgck tplqaanvpn ldaialagvs glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcgaldrmk lpsfpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelswei srilvshpln akrlaegkni anivllrgcg
      241 irievppfqk khdlwpcmva ptkiiaglgl sldinileap gatgdyrtli tskataiaka
      301 lsaplqtcpn vfvpgedehk pgrsdgydfg flhikaidda ghdkatvfkv kgleavdqai
      361 gqlaklmwqa estgnfqyfi cvtgdhstpv eygdhsfepv pfaicrlkdf vgaiggesvi
      421 lepsldpfpl ptvkagedln editlgkgrn ckqveslsgd svfefneiaa argalgrfpg
      481 gemmgiikrf lklsa
//
LOCUS       XP_016676126             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_016676126
VERSION     XP_016676126.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820637.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676126.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53053
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,361..362)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107895323"
                     /coded_by="XM_016820637.2:450..1937"
                     /db_xref="GeneID:107895323"
ORIGIN      
        1 mgtpaeskrr vafvlidglg dvsipkfgck tplqaanvpn ldaialagvs glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcgaldrmk lpsfpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelswei srilvshpln akrlaegkni anivllrgcg
      241 irievppfqk khdlwpcmva ptkiiaglgl sldinileap gatgdyrtli tskataiaka
      301 lsaplqtcpn vfvpgedehk pgrsdgydfg flhikaidda ghdkatvfkv kgleavdqai
      361 gqlaklmwqa estgnfqyfi cvtgdhstpv eygdhsfepv pfaicrlkdf vgaiggesvi
      421 lepsldpfpl ptvkagedln editlgkgrn ckqveslsgd svfefneiaa argalgrfpg
      481 gemmgiikrf lklsa
//
LOCUS       XP_016676119             580 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676119
VERSION     XP_016676119.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676119.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..580
                     /product="uncharacterized protein"
                     /calculated_mol_wt=65174
     Region          52..124
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          380..>495
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          428..475
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(430,433,446,448,451,454,471,474)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438497"
     Region          528..>561
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(528,541..544,548)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277009"
     CDS             1..580
                     /gene="LOC107895317"
                     /coded_by="XM_016820630.2:17..1759"
                     /db_xref="GeneID:107895317"
ORIGIN      
        1 mlgswlgmps lfplrkllks pfsrltniif rekknsskrl kdyrkrkkme pvvatvsgyh
       61 glerfnlikl isiagasyig cltqstthlv cwrfegrkye lakklktiiv nhrwiedcik
      121 egkrlpegpy mlrsgeemgp llleipdvak gdaltkkckv fsdksnvhdg vgnettdvdr
      181 gasglsgwsk salldenlfq ehgrnsshkl kskafrkspt eenlfsgsnc fqetsstgfs
      241 reeheelfsy asvppmrnkr kisknkepsa hcsaqlmree rdipngsrgt slaesskrkg
      301 rrlvknvnre svvfdisdsd qechpplrvh kpyvgvtsps ghsldrivsl sqiggpsyrd
      361 fsehirldee ieeveeiklr nkgppsndlt spgkgaqpvs grtspdrcsd aerenqdvts
      421 rlstsmnlsc vicwtefspt rgvlpcghrf cysciqewad kmtsrrkapc cplckaifms
      481 itkvedaais dqkifsqtip catstldvsv isdqertgfg aqssaasvci kcrlrepedl
      541 lischfcqir nihrycldpp llpwtcihcq dierlnpyif
//
LOCUS       XP_016676120             395 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase BLUS1 [Gossypium hirsutum].
ACCESSION   XP_016676120
VERSION     XP_016676120.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820631.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676120.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..395
                     /product="serine/threonine-protein kinase BLUS1"
                     /calculated_mol_wt=44105
     Region          14..272
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(21..24,27,29,42,44,75,91..94,137,141..142,144,
                     154..155)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..395
                     /gene="LOC107895319"
                     /coded_by="XM_016820631.2:151..1338"
                     /db_xref="GeneID:107895319"
ORIGIN      
        1 madvqriysa nrfdyvllde ignggsatvy rafylplnav vavkcldldr cnngslenir
       61 letqtmscvd hpnlvrayss fvvdrnlwvv mpfmsvgscl hamkkahpng leeieicfke
      121 tlkaldylhr qghihrdvka gnilvdsnga vklsdfgvsa cmfdsgdrqr crntftgtpc
      181 wmapevmqae tgydskadiw sfgitalela hghpplseyp plkvllmtvq napprlgdkk
      241 fsksfkdmva mclvkdpkkr ptagkllkhs ffkhakppel slkklladfr pplnpvkvlq
      301 iqnsesaqql ssknmasaae yearsmreyp kgisawtfdi qelkaqastl lldddndetl
      361 esrlvdnyrd gltvmgqcnq lfplkcqtlt ksaqf
//
LOCUS       XP_016676116             311 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676116
VERSION     XP_016676116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..311
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35499
     CDS             1..311
                     /gene="LOC107895316"
                     /coded_by="XM_016820627.2:113..1048"
                     /db_xref="GeneID:107895316"
ORIGIN      
        1 mslfktllls nqakvvfktq nplhktflhs psfiirrtls sspqepikkp lsllfeeavg
       61 ltekaggnes eyqeekngim selrelerev ralkenpksk vqkeekekkp kkkvinlvel
      121 fggekmvekr rresgeatvl kdlspfvkaf ashlyskgyf nnanflvdnk ldfsyfdsky
      181 grdfiksaay kfgkdhqeia qwlssknlkt valfgcpsld knnvfaakwl rkifkiqedt
      241 vcsqcmlkds crhankdvwg iaarnlllvh vmkviivynl dqvppkltvp devrdsankl
      301 leeviklsrt t
//
LOCUS       XP_016676117             311 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676117
VERSION     XP_016676117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..311
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35499
     CDS             1..311
                     /gene="LOC107895316"
                     /coded_by="XM_016820628.2:112..1047"
                     /db_xref="GeneID:107895316"
ORIGIN      
        1 mslfktllls nqakvvfktq nplhktflhs psfiirrtls sspqepikkp lsllfeeavg
       61 ltekaggnes eyqeekngim selrelerev ralkenpksk vqkeekekkp kkkvinlvel
      121 fggekmvekr rresgeatvl kdlspfvkaf ashlyskgyf nnanflvdnk ldfsyfdsky
      181 grdfiksaay kfgkdhqeia qwlssknlkt valfgcpsld knnvfaakwl rkifkiqedt
      241 vcsqcmlkds crhankdvwg iaarnlllvh vmkviivynl dqvppkltvp devrdsankl
      301 leeviklsrt t
//
LOCUS       XP_016676118             311 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676118
VERSION     XP_016676118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820629.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..311
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35499
     CDS             1..311
                     /gene="LOC107895316"
                     /coded_by="XM_016820629.2:113..1048"
                     /db_xref="GeneID:107895316"
ORIGIN      
        1 mslfktllls nqakvvfktq nplhktflhs psfiirrtls sspqepikkp lsllfeeavg
       61 ltekaggnes eyqeekngim selrelerev ralkenpksk vqkeekekkp kkkvinlvel
      121 fggekmvekr rresgeatvl kdlspfvkaf ashlyskgyf nnanflvdnk ldfsyfdsky
      181 grdfiksaay kfgkdhqeia qwlssknlkt valfgcpsld knnvfaakwl rkifkiqedt
      241 vcsqcmlkds crhankdvwg iaarnlllvh vmkviivynl dqvppkltvp devrdsankl
      301 leeviklsrt t
//
LOCUS       XP_016676112             503 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676112
VERSION     XP_016676112.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820623.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676112.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..503
                     /product="protein GRAVITROPIC IN THE LIGHT 1 isoform X1"
                     /calculated_mol_wt=57353
     Region          120..245
                     /region_name="DUF641"
                     /note="Plant protein of unknown function (DUF641);
                     pfam04859"
                     /db_xref="CDD:461458"
     CDS             1..503
                     /gene="LOC107895315"
                     /coded_by="XM_016820623.2:1481..2992"
                     /db_xref="GeneID:107895315"
ORIGIN      
        1 mdhnggllss fnfahleley yacclppvcy kntahldldl csyrnfcmme avkpsavtps
       61 kskwirslsk vlhlhtatag ivpddgvqkv kskdaeewnd sktakrlskk fdslhdeele
      121 rkvalealia kifatvsaik agyaqlqhaq spydaegiqa adqlivtdlk klselkqcfl
      181 kkqydpspeh tmiladiqeq kslsktfeim gkklesqlkl keseiiflre kldesnkhnr
      241 llgkrlnqsg qlfvldnlql ssltpsnfst vlgqtvksir sfvrlmldem ksadwdinaa
      301 assieqgvvy wkaddkcftf esficremfk afhhpyfsly gnsisegkrr pqvfidrfme
      361 mksvkvgeyl avkpkstfak fcrtkylqvv hprmessffg nlsnrdmvns yqfpdtmffa
      421 lftemakrvw llhclafafe peasifqisk gcrfsevyme svaeeaflss eseprvaftv
      481 vpgfrihktv iqaqvylsql ktr
//
LOCUS       XP_016676113             455 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GRAVITROPIC IN THE LIGHT 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676113
VERSION     XP_016676113.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820624.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676113.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..455
                     /product="protein GRAVITROPIC IN THE LIGHT 1 isoform X2"
                     /calculated_mol_wt=51837
     Region          72..197
                     /region_name="DUF641"
                     /note="Plant protein of unknown function (DUF641);
                     pfam04859"
                     /db_xref="CDD:461458"
     CDS             1..455
                     /gene="LOC107895315"
                     /coded_by="XM_016820624.2:308..1675"
                     /db_xref="GeneID:107895315"
ORIGIN      
        1 meavkpsavt pskskwirsl skvlhlhtat agivpddgvq kvkskdaeew ndsktakrls
       61 kkfdslhdee lerkvaleal iakifatvsa ikagyaqlqh aqspydaegi qaadqlivtd
      121 lkklselkqc flkkqydpsp ehtmiladiq eqkslsktfe imgkklesql klkeseiifl
      181 rekldesnkh nrllgkrlnq sgqlfvldnl qlssltpsnf stvlgqtvks irsfvrlmld
      241 emksadwdin aaassieqgv vywkaddkcf tfesficrem fkafhhpyfs lygnsisegk
      301 rrpqvfidrf memksvkvge ylavkpkstf akfcrtkylq vvhprmessf fgnlsnrdmv
      361 nsyqfpdtmf falftemakr vwllhclafa fepeasifqi skgcrfsevy mesvaeeafl
      421 sseseprvaf tvvpgfrihk tviqaqvyls qlktr
//
LOCUS       XP_016676114             455 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GRAVITROPIC IN THE LIGHT 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016676114
VERSION     XP_016676114.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820625.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676114.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..455
                     /product="protein GRAVITROPIC IN THE LIGHT 1 isoform X2"
                     /calculated_mol_wt=51837
     Region          72..197
                     /region_name="DUF641"
                     /note="Plant protein of unknown function (DUF641);
                     pfam04859"
                     /db_xref="CDD:461458"
     CDS             1..455
                     /gene="LOC107895315"
                     /coded_by="XM_016820625.2:708..2075"
                     /db_xref="GeneID:107895315"
ORIGIN      
        1 meavkpsavt pskskwirsl skvlhlhtat agivpddgvq kvkskdaeew ndsktakrls
       61 kkfdslhdee lerkvaleal iakifatvsa ikagyaqlqh aqspydaegi qaadqlivtd
      121 lkklselkqc flkkqydpsp ehtmiladiq eqkslsktfe imgkklesql klkeseiifl
      181 rekldesnkh nrllgkrlnq sgqlfvldnl qlssltpsnf stvlgqtvks irsfvrlmld
      241 emksadwdin aaassieqgv vywkaddkcf tfesficrem fkafhhpyfs lygnsisegk
      301 rrpqvfidrf memksvkvge ylavkpkstf akfcrtkylq vvhprmessf fgnlsnrdmv
      361 nsyqfpdtmf falftemakr vwllhclafa fepeasifqi skgcrfsevy mesvaeeafl
      421 sseseprvaf tvvpgfrihk tviqaqvyls qlktr
//
LOCUS       XP_040941311             455 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GRAVITROPIC IN THE LIGHT 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941311
VERSION     XP_040941311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085377.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..455
                     /product="protein GRAVITROPIC IN THE LIGHT 1 isoform X2"
                     /calculated_mol_wt=51837
     Region          72..197
                     /region_name="DUF641"
                     /note="Plant protein of unknown function (DUF641);
                     pfam04859"
                     /db_xref="CDD:461458"
     CDS             1..455
                     /gene="LOC107895315"
                     /coded_by="XM_041085377.1:310..1677"
                     /db_xref="GeneID:107895315"
ORIGIN      
        1 meavkpsavt pskskwirsl skvlhlhtat agivpddgvq kvkskdaeew ndsktakrls
       61 kkfdslhdee lerkvaleal iakifatvsa ikagyaqlqh aqspydaegi qaadqlivtd
      121 lkklselkqc flkkqydpsp ehtmiladiq eqkslsktfe imgkklesql klkeseiifl
      181 rekldesnkh nrllgkrlnq sgqlfvldnl qlssltpsnf stvlgqtvks irsfvrlmld
      241 emksadwdin aaassieqgv vywkaddkcf tfesficrem fkafhhpyfs lygnsisegk
      301 rrpqvfidrf memksvkvge ylavkpkstf akfcrtkylq vvhprmessf fgnlsnrdmv
      361 nsyqfpdtmf falftemakr vwllhclafa fepeasifqi skgcrfsevy mesvaeeafl
      421 sseseprvaf tvvpgfrihk tviqaqvyls qlktr
//
LOCUS       XP_016676110             356 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 41 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016676110
VERSION     XP_016676110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820621.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..356
                     /product="protein trichome birefringence-like 41 isoform
                     X1"
                     /calculated_mol_wt=39922
     Region          36..356
                     /region_name="PLN02629"
                     /note="powdery mildew resistance 5"
                     /db_xref="CDD:215338"
     CDS             1..356
                     /gene="LOC107895313"
                     /coded_by="XM_016820621.2:147..1217"
                     /db_xref="GeneID:107895313"
ORIGIN      
        1 mgvwvdansl isssfyllvl clicsrngna aaangcdlft grwvldpsyp lykasacpfi
       61 qkefscqkng rqdlvytqyr wqplgctltr fnglkllekf rgksiifvgd slslnqwqsl
      121 tcmlhyavps aqfnisrvgd vttfefldye vkvmvdrsvy lvdvvmekig rvlkldsiqg
      181 gklwkgidml ifntwhwwnr rgptqpwdyi evggvikkdm drmqafeial ntwagwvdan
      241 idpsksllff qgispshyng tlwgepkakn cvgqkqpllg ttypgglppa vdvvkkvlsk
      301 mkkpvklldi tllsllhkdg hpsmyglggs tgmdcshwcl agvpdtwnel lynlil
//
LOCUS       XP_040941312             313 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 41 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941312
VERSION     XP_040941312.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085378.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="protein trichome birefringence-like 41 isoform
                     X2"
                     /calculated_mol_wt=34963
     Region          86..309
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..313
                     /gene="LOC107895313"
                     /coded_by="XM_041085378.1:159..1100"
                     /db_xref="GeneID:107895313"
ORIGIN      
        1 mpillfhhlf tcwfcalsaa amemlllqma aiclqaggfw ihltlftkpq lapsfrkssa
       61 akrtaariwf tlnidgnllv ahslvpsaqf nisrvgdvtt fefldyevkv mvdrsvylvd
      121 vvmekigrvl kldsiqggkl wkgidmlifn twhwwnrrgp tqpwdyievg gvikkdmdrm
      181 qafeialntw agwvdanidp sksllffqgi spshyngtlw gepkakncvg qkqpllgtty
      241 pgglppavdv vkkvlskmkk pvkllditll sllhkdghps myglggstgm dcshwclagv
      301 pdtwnellyn lil
//
LOCUS       XP_040941313             558 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941313
VERSION     XP_040941313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085379.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..558
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59870
     Region          93..220
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..558
                     /gene="LOC121212504"
                     /coded_by="XM_041085379.1:215..1891"
                     /db_xref="GeneID:121212504"
ORIGIN      
        1 masadsayge pssgvfaagr vttvlprhev vkldegtylq wrkqvklivn gyglagfldg
       61 tvappsrfia lpdgsrapnp aaqvftqqdq llmswllstv tsshqssfdd actacdiwsm
      121 adnlftadtg akqsrirhel hslkkgnlsi kayvarikdl csmldasgsr isdeekievv
      181 laglpsefea vissarlspv vlplqrlvda lvdcesrqdr vlqevslnan lvenelsveg
      241 agrggrasvr grgrfirsrv qcqicsrfgh vaqkcyyryh rdsnemsgve gcdsgtfvqn
      301 gdeqmvaplq ksqrifygqg shagqnryvs qnvcagmqnr slprgphvsn aqndaykpsl
      361 skfghdagqg ysgdtlhgft tgngqwrgys gnkshgqnvq fndgpnvqhs shgpnvqfna
      421 gpnfvpssnf vqldqddpgs pepigdglgv ggpvlkftkp rarvytgsnp ciglprlgdl
      481 yasdysdpsv sdshvntaql asstgnddsy ipvcggttsw ypdsgashhv crdvsdlrnv
      541 tpysgygdsg diadgphs
//
LOCUS       XP_040941315             388 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box protein At5g55150 [Gossypium hirsutum].
ACCESSION   XP_040941315
VERSION     XP_040941315.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085381.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..388
                     /product="putative F-box protein At5g55150"
                     /calculated_mol_wt=45008
     Region          300..357
                     /region_name="DUF295"
                     /note="Protein of unknown function (DUF295); pfam03478"
                     /db_xref="CDD:460939"
     CDS             1..388
                     /gene="LOC121212505"
                     /coded_by="XM_041085381.1:95..1261"
                     /db_xref="GeneID:121212505"
ORIGIN      
        1 mgnsmpdwey lpklclltvf ekidepislv qfgavskywh slfntfldik rrsstnlvpm
       61 lmipfkksat krkiyslqak skiaeiefpk pytwrycgsc ygwlatvdes fnitlsnpfe
      121 nlsirlpqfd smaydsghyt ykilkvvlse dpllhpnnfv vvviysvygr lafyrpcqen
      181 wiymdvdedq slfldilfhk glvyaighyn nlvwfdvngv eddesskppk lntlvptilr
      241 lenyshrayl vrssmgnlys ihkhlkfeev gersvhsikk ftvfklildd ensrllekke
      301 vqsidgdivf vgdnrtlavs aldfpegqpn siyftddfid tdtyepfgpr digifhlkdg
      361 slekyyqfks shkdlppyiw ispsieyn
//
LOCUS       XP_016676109             247 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L13, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016676109
VERSION     XP_016676109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820620.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..247
                     /product="50S ribosomal protein L13, chloroplastic"
                     /calculated_mol_wt=27841
     Region          108..239
                     /region_name="RplM"
                     /note="Ribosomal protein L13 [Translation, ribosomal
                     structure and biogenesis]; COG0102"
                     /db_xref="CDD:439872"
     CDS             1..247
                     /gene="LOC107895312"
                     /coded_by="XM_016820620.2:176..919"
                     /db_xref="GeneID:107895312"
ORIGIN      
        1 mallcastsv ifsssssser psfaslkrts psnqssflgf fpvvalskps yartttlsfs
       61 krdfkvccrd lslvpenqrw mfeeseadgp diwnntwypk akdhinnekt wyivdatdki
      121 lgrlastiav hirgknlpty tpsvdmgafv ivvnaekvav sgkkrtqkly rrhsgrpggm
      181 kvetfnqlqq riperiieha vrgmlpkgrl gralfnhlkv ykgadhphea qkpielpird
      241 krvqkqr
//
LOCUS       XP_016676108             411 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ROOT INITIATION DEFECTIVE 3 [Gossypium hirsutum].
ACCESSION   XP_016676108
VERSION     XP_016676108.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820619.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..411
                     /product="protein ROOT INITIATION DEFECTIVE 3"
                     /calculated_mol_wt=43825
     Region          <3..301
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          127..174
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..217
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          223..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..411
                     /gene="LOC107895311"
                     /coded_by="XM_016820619.2:19..1254"
                     /db_xref="GeneID:107895311"
ORIGIN      
        1 msspshpivl tsslngpita fdavsgvplc hfsgsrspyh glalvgnsfi atshisaets
       61 sasihlynww sstaldnflv pepvaplsat ldglylfagg lsgsvhalsv psgeilasys
      121 ahnkpvsclk isedgsllis ggddgtisfv pifqiieasp dksstslmlq rfvahdgsvt
      181 aidsimaqcn stiisssldc tikiwglldg tklrtvtfpc aimgialdqi rkeffaassd
      241 gfiykgsina gskkhvnqtq efirwaqkhe sgivslvmvs etnnlvsase dgkvyiweie
      301 tgeaimgldn dvgsisdmvv angmerglkf gkkadnfydg ysglcrvels rslkdtldie
      361 dvlrvatkdr sraidmlesa isayerllel ilkeakkgps ssksgnekhs l
//
LOCUS       XP_016676104             418 aa            linear   PLN 06-AUG-2024
DEFINITION  solanesyl diphosphate synthase 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016676104
VERSION     XP_016676104.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820615.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..418
                     /product="solanesyl diphosphate synthase 1, chloroplastic"
                     /calculated_mol_wt=45860
     Region          2..418
                     /region_name="PLN02857"
                     /note="octaprenyl-diphosphate synthase"
                     /db_xref="CDD:215462"
     Site            order(175,178..180,182..184,186..187,192..193,245,248,
                     269..270,273,310..311,314,324,329,334)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173833"
     Site            178..187
                     /site_type="active"
                     /note="chain length determination region [active]"
                     /db_xref="CDD:173833"
     Site            order(183..184,187,192..193,248,269,310..311,314,324,329,
                     334)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173833"
     Site            order(183..184,187,192..193,269,310..311)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173833"
     Site            order(183..184,187,192..193,248,269)
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173833"
     Site            order(189..203,317..318,324..329,332..336)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173833"
     Site            order(310..311,314,324,329,334)
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173833"
     CDS             1..418
                     /gene="LOC107895305"
                     /coded_by="XM_016820615.2:451..1707"
                     /db_xref="GeneID:107895305"
ORIGIN      
        1 mmsmtchnld fgtrvldlva vgsssnssie rhvvknhgkt fatkvygarr maccrqnisr
       61 trvfstntse alldgvgqrt apvldlkkea kspislanlf kvvaddlqtl nqnlqsivga
      121 enpvlmsaae qifgaggkrm rpalvflvsr ataelvglkd lttkhrrlae iiemihtasl
      181 ihddvldesd mrrgketvhq lygtrvavla gdfmfaqssw ylanlenlev iklisqvikd
      241 fasgeikqas slfdcdvkle dyllksyykt asliaastkg aaifsgadrs vteqmyeygk
      301 nlglsfqvvd dildftqsae qlgkpagsdl akgnltapvi faleketklr eiiesefcet
      361 gsldeaielv kqcggieraq elakekadia ikslqclpqs nfrlgledmv mfnlerid
//
LOCUS       XP_016676106             160 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial inner membrane protease subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016676106
VERSION     XP_016676106.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820617.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..160
                     /product="mitochondrial inner membrane protease subunit 1"
                     /calculated_mol_wt=17618
     Region          31..154
                     /region_name="sigpep_I_bact"
                     /note="signal peptidase I, bacterial type; TIGR02227"
                     /db_xref="CDD:274044"
     CDS             1..160
                     /gene="LOC107895306"
                     /coded_by="XM_016820617.2:190..672"
                     /db_xref="GeneID:107895306"
ORIGIN      
        1 mrqwrsiake amdrasiivk flcllhvtda yvvssnhvlg psmlptlnit gdvvlvehls
       61 hrigklgsgd lvlvrspldp nktltkriva megdkvtfsl dptrsfssrs lvvpkghvwi
      121 qgdnlyvsrd srhfgplpyg liegkvfmrv wppssfgllg
//
LOCUS       XP_016676107             160 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial inner membrane protease subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016676107
VERSION     XP_016676107.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820618.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..160
                     /product="mitochondrial inner membrane protease subunit 1"
                     /calculated_mol_wt=17618
     Region          31..154
                     /region_name="sigpep_I_bact"
                     /note="signal peptidase I, bacterial type; TIGR02227"
                     /db_xref="CDD:274044"
     CDS             1..160
                     /gene="LOC107895306"
                     /coded_by="XM_016820618.2:190..672"
                     /db_xref="GeneID:107895306"
ORIGIN      
        1 mrqwrsiake amdrasiivk flcllhvtda yvvssnhvlg psmlptlnit gdvvlvehls
       61 hrigklgsgd lvlvrspldp nktltkriva megdkvtfsl dptrsfssrs lvvpkghvwi
      121 qgdnlyvsrd srhfgplpyg liegkvfmrv wppssfgllg
//
LOCUS       XP_016676105             160 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial inner membrane protease subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016676105
VERSION     XP_016676105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820616.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..160
                     /product="mitochondrial inner membrane protease subunit 1"
                     /calculated_mol_wt=17618
     Region          31..154
                     /region_name="sigpep_I_bact"
                     /note="signal peptidase I, bacterial type; TIGR02227"
                     /db_xref="CDD:274044"
     CDS             1..160
                     /gene="LOC107895306"
                     /coded_by="XM_016820616.2:198..680"
                     /db_xref="GeneID:107895306"
ORIGIN      
        1 mrqwrsiake amdrasiivk flcllhvtda yvvssnhvlg psmlptlnit gdvvlvehls
       61 hrigklgsgd lvlvrspldp nktltkriva megdkvtfsl dptrsfssrs lvvpkghvwi
      121 qgdnlyvsrd srhfgplpyg liegkvfmrv wppssfgllg
//
LOCUS       XP_016696797             153 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L18a-like protein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016696797
VERSION     XP_016696797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="60S ribosomal protein L18a-like protein isoform
                     X1"
                     /calculated_mol_wt=16528
     Region          42..>67
                     /region_name="PRP8"
                     /note="U5 snRNP spliceosome subunit [RNA processing and
                     modification]; COG5178"
                     /db_xref="CDD:227505"
     Region          <60..>151
                     /region_name="ThrE"
                     /note="Putative threonine/serine exporter; cl46398"
                     /db_xref="CDD:480738"
     CDS             1..153
                     /gene="LOC107912921"
                     /coded_by="XM_016841308.2:247..708"
                     /db_xref="GeneID:107912921"
ORIGIN      
        1 msgdeknpav vvdhqhhqyg tfqgvsnypp ppppqhhgpa igfpqpvppp glhepsappp
       61 qyypqgyqtv pgyavaegrp vrerrlpccg igfgwflfii gfflgaipwy iglfvllcar
      121 idyrekpgyi actiaavlat iaiilgvtkg idd
//
LOCUS       XP_040941317             134 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L18a-like protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941317
VERSION     XP_040941317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085383.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="60S ribosomal protein L18a-like protein isoform
                     X2"
                     /calculated_mol_wt=14367
     Region          42..>67
                     /region_name="PRP8"
                     /note="U5 snRNP spliceosome subunit [RNA processing and
                     modification]; COG5178"
                     /db_xref="CDD:227505"
     CDS             1..134
                     /gene="LOC107912921"
                     /coded_by="XM_041085383.1:205..609"
                     /db_xref="GeneID:107912921"
ORIGIN      
        1 msgdeknpav vvdhqhhqyg tfqgvsnypp ppppqhhgpa igfpqpvppp glhepsappp
       61 qyypqgyqtv pgyavaegrp vrerrlpccg igfgwflgds lsirgvyffe glslvsslgp
      121 spgtldclfy fvqg
//
LOCUS       XP_016696798             356 aa            linear   PLN 06-AUG-2024
DEFINITION  glutelin type-B 5 [Gossypium hirsutum].
ACCESSION   XP_016696798
VERSION     XP_016696798.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696798.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..356
                     /product="glutelin type-B 5"
                     /calculated_mol_wt=38337
     Region          3..172
                     /region_name="cupin_11S_legumin_N"
                     /note="11S legumin seed storage globulin, N-terminal cupin
                     domain; cd02242"
                     /db_xref="CDD:380369"
     Site            order(3..8,24,31..32,34..35,37,39,41,51..52,54..56,58..60,
                     62,64,70,72..75,78..80,82..83,85,87..93,99,111,113,115,
                     120..122,124,126,136..141,144,147..151,155,158..159,171)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380369"
     Site            order(34,51..52,54..56,73,75,78..79,99,120..122,124,126,
                     136..137,139..141,144,147..151,155,158..159)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:380369"
     Region          198..353
                     /region_name="cupin_11S_legumin_C"
                     /note="11S legumin seed storage globulin, C-terminal cupin
                     domain; cd02243"
                     /db_xref="CDD:380370"
     Site            order(198..203,206,209,211..212,216,219,231,306,308..309,
                     350,353)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:380370"
     Site            order(225,227,238,240..241,246..248,250,252,258,271..272,
                     277..282,288,299,301)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380370"
     Site            order(235,238,240,245..246,257,259,261..262,265,267,
                     282..283,285..286,288,290,303,308..309,312..313,318..321,
                     323..326,329..331,333,337,340..342,344,352..353)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:380370"
     CDS             1..356
                     /gene="LOC107912923"
                     /coded_by="XM_016841309.2:287..1357"
                     /db_xref="GeneID:107912923"
ORIGIN      
        1 meldlspkla kkvygddggs yyswcpnelp mlregnigaa klalekngfa lprysdssmv
       61 ayvlqgagva giilpeseek viaikkgdai alpfgvitww ynkedtelvv lfmgdtskgh
      121 kpgqftdffl tgsngiftgf ttdfverawd vdddiakali gnqkgkgivk ldanvkmpep
      181 kpdhrkgmal nceeapldtd iknagnvvll ntqnlplvgq vglgadlvrl egnamcspgf
      241 scdsalqvty ivkgsgrlqv vgvdgkwvle tivkagnlli vprffvvski adpgglswfs
      301 iittpnpmft hlagsigawk aispevlqaa fkvpaetekl frskrtndai ffpppn
//
LOCUS       XP_016696799             578 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 27 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016696799
VERSION     XP_016696799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..578
                     /product="ubiquitin carboxyl-terminal hydrolase 27 isoform
                     X1"
                     /calculated_mol_wt=64944
     Region          <71..576
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          71..575
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(74,79,521,553)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..578
                     /gene="LOC107912924"
                     /coded_by="XM_016841310.2:321..2057"
                     /db_xref="GeneID:107912924"
ORIGIN      
        1 meqetsmrai irnwkhgyra llhmrwaadf gfhisvvglv gvvgfvlaii rdgklgekrk
       61 khleklclvp glqnlgnncf lnvilqalas csyfqsflpk ilgecestlv drqgeslplt
      121 itlsdlleel gmagerrvsl sphkvmsals lyiqnfdlts qqdaaeaflh llsslreefs
      181 diylpnqstl adifasqtsr iltperkevq neqkrwqqhy lgpfdgiigs ilscrscsyq
      241 isldfqffhs lplfpvlyga stimagctle dclwqfvlae klenyycshc whsaaikfls
      301 ckganevmpf lieieklkrc gaeescdcrs fcclenlpws nnfsntlkql ciarcpkilc
      361 lhlqrasine fgeliklqgh iafplildls pfmtteveit nwegvhkgql klqnqktmph
      421 lnlinaqyes ilnriskptg ekvsseilva ngsqcttspg eslpekskly ptdgcskasn
      481 idmheqhndk isltsklpps etksyrlasv vehfgrpggg hytvyrsmrt ksdeedsdey
      541 sepattkwfc isdsqvcsvs ekdvlaaeas llfyeriv
//
LOCUS       XP_016696800             578 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 27 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016696800
VERSION     XP_016696800.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841311.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..578
                     /product="ubiquitin carboxyl-terminal hydrolase 27 isoform
                     X1"
                     /calculated_mol_wt=64944
     Region          <71..576
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          71..575
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(74,79,521,553)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..578
                     /gene="LOC107912924"
                     /coded_by="XM_016841311.2:181..1917"
                     /db_xref="GeneID:107912924"
ORIGIN      
        1 meqetsmrai irnwkhgyra llhmrwaadf gfhisvvglv gvvgfvlaii rdgklgekrk
       61 khleklclvp glqnlgnncf lnvilqalas csyfqsflpk ilgecestlv drqgeslplt
      121 itlsdlleel gmagerrvsl sphkvmsals lyiqnfdlts qqdaaeaflh llsslreefs
      181 diylpnqstl adifasqtsr iltperkevq neqkrwqqhy lgpfdgiigs ilscrscsyq
      241 isldfqffhs lplfpvlyga stimagctle dclwqfvlae klenyycshc whsaaikfls
      301 ckganevmpf lieieklkrc gaeescdcrs fcclenlpws nnfsntlkql ciarcpkilc
      361 lhlqrasine fgeliklqgh iafplildls pfmtteveit nwegvhkgql klqnqktmph
      421 lnlinaqyes ilnriskptg ekvsseilva ngsqcttspg eslpekskly ptdgcskasn
      481 idmheqhndk isltsklpps etksyrlasv vehfgrpggg hytvyrsmrt ksdeedsdey
      541 sepattkwfc isdsqvcsvs ekdvlaaeas llfyeriv
//
LOCUS       XP_016696801             578 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 27 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016696801
VERSION     XP_016696801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..578
                     /product="ubiquitin carboxyl-terminal hydrolase 27 isoform
                     X1"
                     /calculated_mol_wt=64944
     Region          <71..576
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          71..575
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(74,79,521,553)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..578
                     /gene="LOC107912924"
                     /coded_by="XM_016841312.2:142..1878"
                     /db_xref="GeneID:107912924"
ORIGIN      
        1 meqetsmrai irnwkhgyra llhmrwaadf gfhisvvglv gvvgfvlaii rdgklgekrk
       61 khleklclvp glqnlgnncf lnvilqalas csyfqsflpk ilgecestlv drqgeslplt
      121 itlsdlleel gmagerrvsl sphkvmsals lyiqnfdlts qqdaaeaflh llsslreefs
      181 diylpnqstl adifasqtsr iltperkevq neqkrwqqhy lgpfdgiigs ilscrscsyq
      241 isldfqffhs lplfpvlyga stimagctle dclwqfvlae klenyycshc whsaaikfls
      301 ckganevmpf lieieklkrc gaeescdcrs fcclenlpws nnfsntlkql ciarcpkilc
      361 lhlqrasine fgeliklqgh iafplildls pfmtteveit nwegvhkgql klqnqktmph
      421 lnlinaqyes ilnriskptg ekvsseilva ngsqcttspg eslpekskly ptdgcskasn
      481 idmheqhndk isltsklpps etksyrlasv vehfgrpggg hytvyrsmrt ksdeedsdey
      541 sepattkwfc isdsqvcsvs ekdvlaaeas llfyeriv
//
LOCUS       XP_016696804             573 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 27 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016696804
VERSION     XP_016696804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..573
                     /product="ubiquitin carboxyl-terminal hydrolase 27 isoform
                     X2"
                     /calculated_mol_wt=64356
     Region          <71..571
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          71..570
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(74,79,516,548)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..573
                     /gene="LOC107912924"
                     /coded_by="XM_016841315.2:321..2042"
                     /db_xref="GeneID:107912924"
ORIGIN      
        1 meqetsmrai irnwkhgyra llhmrwaadf gfhisvvglv gvvgfvlaii rdgklgekrk
       61 khleklclvp glqnlgnncf lnvilqalas csyfqsflpk ilgecestlv drqgeslplt
      121 itlsdlleel gmagerrvsl sphkvmsals lyiqnfdlts qqdaaeaflh llsslreefs
      181 diylpnqstl adifasqtsr iltperkevq neqkrwqqhy lgpfdgiigs ilscrscsyq
      241 isldfqffhs lplfpvlyga stimagctle dclwqfvlae klenyycshc whsaaikfls
      301 ckganeieie klkrcgaees cdcrsfccle nlpwsnnfsn tlkqlciarc pkilclhlqr
      361 asinefgeli klqghiafpl ildlspfmtt eveitnwegv hkgqlklqnq ktmphlnlin
      421 aqyesilnri skptgekvss eilvangsqc ttspgeslpe ksklyptdgc skasnidmhe
      481 qhndkislts klppsetksy rlasvvehfg rpggghytvy rsmrtksdee dsdeysepat
      541 tkwfcisdsq vcsvsekdvl aaeasllfye riv
//
LOCUS       XP_040941318             573 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 27 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941318
VERSION     XP_040941318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085384.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..573
                     /product="ubiquitin carboxyl-terminal hydrolase 27 isoform
                     X2"
                     /calculated_mol_wt=64356
     Region          <71..571
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          71..570
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(74,79,516,548)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..573
                     /gene="LOC107912924"
                     /coded_by="XM_041085384.1:182..1903"
                     /db_xref="GeneID:107912924"
ORIGIN      
        1 meqetsmrai irnwkhgyra llhmrwaadf gfhisvvglv gvvgfvlaii rdgklgekrk
       61 khleklclvp glqnlgnncf lnvilqalas csyfqsflpk ilgecestlv drqgeslplt
      121 itlsdlleel gmagerrvsl sphkvmsals lyiqnfdlts qqdaaeaflh llsslreefs
      181 diylpnqstl adifasqtsr iltperkevq neqkrwqqhy lgpfdgiigs ilscrscsyq
      241 isldfqffhs lplfpvlyga stimagctle dclwqfvlae klenyycshc whsaaikfls
      301 ckganeieie klkrcgaees cdcrsfccle nlpwsnnfsn tlkqlciarc pkilclhlqr
      361 asinefgeli klqghiafpl ildlspfmtt eveitnwegv hkgqlklqnq ktmphlnlin
      421 aqyesilnri skptgekvss eilvangsqc ttspgeslpe ksklyptdgc skasnidmhe
      481 qhndkislts klppsetksy rlasvvehfg rpggghytvy rsmrtksdee dsdeysepat
      541 tkwfcisdsq vcsvsekdvl aaeasllfye riv
//
LOCUS       XP_016696805             574 aa            linear   PLN 06-AUG-2024
DEFINITION  cationic amino acid transporter 8, vacuolar [Gossypium hirsutum].
ACCESSION   XP_016696805
VERSION     XP_016696805.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696805.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..574
                     /product="cationic amino acid transporter 8, vacuolar"
                     /calculated_mol_wt=62565
     Region          51..565
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..574
                     /gene="LOC107912925"
                     /coded_by="XM_016841316.2:1..1725"
                     /db_xref="GeneID:107912925"
ORIGIN      
        1 makekpisst tkrsywrwsk tdffpetsfq tlssyktals qtcprlsdrl larssstdel
       61 vtlqkvsenp mqkcltwwdl iwlgfgsvvg sgifvitgqe ahnnagpaiv lsyaisglsa
      121 llsvfcytef aaeipvaggs fsylrvelgd fvafiaagni llealvgaag lgrswssyfa
      181 smikndsdfl rikvdslpvg fnlldplavv vllvangiam sgtkrtswln wiaslvsgav
      241 ivfvivfgfi haktsnlepf fpygvegvfr aaavvywsyt gfdmvanmae etkkpsrdip
      301 iglvgsmsgi tvvyclmala ltmmvkytei dvnaaysvvf eqigmnwaky lvsicalkgm
      361 ttsllvgslg qaryttqiar ahmippffal ihpktgtpvy atllvtlisa ivalfssldv
      421 lssvlsfstl fifmliaval lvrryyvkdv tpkndlvkfl iclfitigss igvsalwnsn
      481 ergwlgytta gllwffgtlg maflskqrvp kvwgvplvpw lpslsivmnl fligslglta
      541 ilrfiicsav mivyyllvgl hatydvahqn elsa
//
LOCUS       XP_016696806             332 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin 2-beta-dioxygenase 1 [Gossypium hirsutum].
ACCESSION   XP_016696806
VERSION     XP_016696806.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696806.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..332
                     /product="gibberellin 2-beta-dioxygenase 1"
                     /calculated_mol_wt=37209
     Region          1..328
                     /region_name="PLN02156"
                     /note="gibberellin 2-beta-dioxygenase"
                     /db_xref="CDD:177816"
     CDS             1..332
                     /gene="LOC107912927"
                     /coded_by="XM_016841317.2:190..1188"
                     /db_xref="GeneID:107912927"
ORIGIN      
        1 mvilskpaie qfgcirnkqa atlfpplipl vdlskpdsrq qiikaceefg ffkvinhgvp
       61 mdfisrlese atkffslpls ekektgqpqp ygygnkrigp ngdvgwveyl llttnqdpnl
      121 lgtenpesfr ialdnymaav kkmaceilem iadglkvqpr nvlsklmmde qsdsvfrlnh
      181 yppcpevvqs lngtssnvig fgehtdpqii svlrsnntsg lqislrdgtw isvppdqysf
      241 finvgdslqv mtngrfksvk hrvlansvks rlsmiyfcgp plsekiaplp slmrgdqqsl
      301 ykeftwfeyk ksayssrlad nrlmhfekiv as
//
LOCUS       XP_040941320             423 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase DA2L isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941320
VERSION     XP_040941320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085386.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..423
                     /product="E3 ubiquitin-protein ligase DA2L isoform X1"
                     /calculated_mol_wt=46596
     Region          10..>110
                     /region_name="SIP5-like"
                     /note="SNF1-interacting protein 5 and similar proteins;
                     cd24139"
                     /db_xref="CDD:467940"
     CDS             1..423
                     /gene="LOC107912928"
                     /coded_by="XM_041085386.1:485..1756"
                     /db_xref="GeneID:107912928"
ORIGIN      
        1 mgnklgrrrq vvdekytrpq glyvhkdvdi kklrkliles klapcypgde eccsdleecp
       61 icflyypsln rsrccmksic tecflqmknp nstrptqcpf cktsnyavey rgvktkeekg
      121 ieqieeqrvi eaqirmrqqe lqddeermlk rqdlssssta vapgevqyns iadrspreee
      181 ifssqdsqaa lmigqrshpr vnrdddfdid leeimvmeav wqsiqensrq rnlnnvgaas
      241 svhyvsgdgy vlpstttvtg sssspsggla caiaalaerq qmggesslnh dgsmqafdml
      301 psssssrrfy nnrlhqvgen yppaespvgd ggmtpgsdeg kwginhelev aeagtsyass
      361 dvtedsggis aipqqdeirg sfqsvggpgp mvpesyeeqm mlamavslae aramtsgpgl
      421 swq
//
LOCUS       XP_016696807             423 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase DA2L isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016696807
VERSION     XP_016696807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..423
                     /product="E3 ubiquitin-protein ligase DA2L isoform X1"
                     /calculated_mol_wt=46596
     Region          10..>110
                     /region_name="SIP5-like"
                     /note="SNF1-interacting protein 5 and similar proteins;
                     cd24139"
                     /db_xref="CDD:467940"
     CDS             1..423
                     /gene="LOC107912928"
                     /coded_by="XM_016841318.2:605..1876"
                     /db_xref="GeneID:107912928"
ORIGIN      
        1 mgnklgrrrq vvdekytrpq glyvhkdvdi kklrkliles klapcypgde eccsdleecp
       61 icflyypsln rsrccmksic tecflqmknp nstrptqcpf cktsnyavey rgvktkeekg
      121 ieqieeqrvi eaqirmrqqe lqddeermlk rqdlssssta vapgevqyns iadrspreee
      181 ifssqdsqaa lmigqrshpr vnrdddfdid leeimvmeav wqsiqensrq rnlnnvgaas
      241 svhyvsgdgy vlpstttvtg sssspsggla caiaalaerq qmggesslnh dgsmqafdml
      301 psssssrrfy nnrlhqvgen yppaespvgd ggmtpgsdeg kwginhelev aeagtsyass
      361 dvtedsggis aipqqdeirg sfqsvggpgp mvpesyeeqm mlamavslae aramtsgpgl
      421 swq
//
LOCUS       XP_016696808             348 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase DA2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016696808
VERSION     XP_016696808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841319.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..348
                     /product="E3 ubiquitin-protein ligase DA2 isoform X2"
                     /calculated_mol_wt=37829
     Region          <2..>35
                     /region_name="SIP5-like"
                     /note="SNF1-interacting protein 5 and similar proteins;
                     cd24139"
                     /db_xref="CDD:467940"
     CDS             1..348
                     /gene="LOC107912928"
                     /coded_by="XM_016841319.2:255..1301"
                     /db_xref="GeneID:107912928"
ORIGIN      
        1 mksictecfl qmknpnstrp tqcpfcktsn yaveyrgvkt keekgieqie eqrvieaqir
       61 mrqqelqdde ermlkrqdls ssstavapge vqynsiadrs preeeifssq dsqaalmigq
      121 rshprvnrdd dfdidleeim vmeavwqsiq ensrqrnlnn vgaassvhyv sgdgyvlpst
      181 ttvtgssssp sgglacaiaa laerqqmgge sslnhdgsmq afdmlpssss srrfynnrlh
      241 qvgenyppae spvgdggmtp gsdegkwgin helevaeagt syassdvted sggisaipqq
      301 deirgsfqsv ggpgpmvpes yeeqmmlama vslaearamt sgpglswq
//
LOCUS       XP_016696809             589 aa            linear   PLN 06-AUG-2024
DEFINITION  9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016696809
VERSION     XP_016696809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..589
                     /product="9-cis-epoxycarotenoid dioxygenase NCED2,
                     chloroplastic"
                     /calculated_mol_wt=65057
     Region          3..589
                     /region_name="PLN02258"
                     /note="9-cis-epoxycarotenoid dioxygenase NCED"
                     /db_xref="CDD:215145"
     CDS             1..589
                     /gene="LOC107912930"
                     /coded_by="XM_016841320.2:118..1887"
                     /db_xref="GeneID:107912930"
ORIGIN      
        1 massssqavs ttnckflpvs tcfssslnlg smplkrtrrk pniscslqtp silllpnqss
       61 tdyttknavk pqpqhwnpfq raaamaldvv enalvsherh hplpktadpa vqisgnfapv
      121 pdrpvkhnlp vigtipdclq gvyvrnganp lhepvaghhf fdgdgmvhav qfqngsasya
      181 crftetnrlv qeralgrpvf pkaigelhgh sgiarlllfy arglfglvdp shgtgvanag
      241 lvcfnghlla mseddlpyhv rvtpsgdlet vgrydfdgql kstmiahpkv dpetgeffal
      301 sydviqkpyl kyfrfspdgk kspdvdipvd gptmihdfai tenlvvipdq qvvfklpemi
      361 hggspvvhdk nkmsrfgild knatdasgit wveapdcfcf hlwnaweepe tdevvvigsc
      421 mtppdsifne cdeslksvls eirlnlrtak strrpiipds eqvnleagmv nrnllgrktr
      481 yaylalaepw pkvsgfakvd lstgeikkyi ygdqryggep llfprnpnle neddgyilaf
      541 vhdertwkse vqivnamnle veatvklpsr vpygfhgtfi sskdlekqa
//
LOCUS       XP_016694680             219 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016694680
VERSION     XP_016694680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=24905
     Region          5..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(13,15,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(18,25,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          89..212
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(90,92,96,104)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(96,103,155..156,159,199)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(103,107..108,111..112,114..115,160,163,205,208,212)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..219
                     /gene="LOC107911335"
                     /coded_by="XM_016839191.2:72..731"
                     /db_xref="GeneID:107911335"
ORIGIN      
        1 maddiilldf wsspfamrvr ialaekgiey eareedlsnk sslllkmnpv hkqipvlihk
       61 grpvceslit vqyidevwsh kspllpshpy hranakfwad fadkkiyptg klvwgatgev
      121 qegakkelie smkvlegelg dkpyfggesf gftdvalipf ytwfysletc gdfsiiancp
      181 nlvawakrcm qresvskslp dqykvycflv elkkkfeak
//
LOCUS       XP_016696810             219 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016696810
VERSION     XP_016696810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841321.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25269
     Region          5..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(13,15,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(18,25,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          89..212
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(90,92,96,104)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(96,103,155..156,159,199)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(103,107..108,111..112,114..115,160,163,205,208,212)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..219
                     /gene="LOC107912931"
                     /coded_by="XM_016841321.2:163..822"
                     /db_xref="GeneID:107912931"
ORIGIN      
        1 magelvlldf wpspfgmrsr ialaekgipy eyreedlrnk sdlllqmnpv hkkipvlihn
       61 gkpvcesviq vqyidevwhd kaplipsdpy qravarfwvd fvdkkiydlg skiwktkgee
      121 qanakkefie clkllegelg dktyfggesl gyvdvalvpf ytwfyayekc gdfsieaecp
      181 kmiawvkrcm qkesvakslp dqekvyefvl qlkklfgie
//
LOCUS       XP_016694682             367 aa            linear   PLN 06-AUG-2024
DEFINITION  scopoletin 8-hydroxylase [Gossypium hirsutum].
ACCESSION   XP_016694682
VERSION     XP_016694682.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694682.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..367
                     /product="scopoletin 8-hydroxylase"
                     /calculated_mol_wt=40928
     Region          13..344
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..367
                     /gene="LOC107911338"
                     /coded_by="XM_016839193.2:323..1426"
                     /db_xref="GeneID:107911338"
ORIGIN      
        1 mapsfedgns vfefvvrrgn gvkglvdsgl skvpeayvqp pkeridkena vkhglppidl
       61 skldgfgpdh devadqivka aetlgffqvv nhgvplhlle slkdtahyff slppqrkavy
      121 rsdvspsplv kygssfmpek ekalewkdyi lmqytnddea lqhwpqeikg vlleylrssi
      181 gmvkkllqvl lgnfrikpdd pmidvligkk mlsmnfypac pnpdltvgvg rhsdmgtltv
      241 llqdgiggly vkmeqdmdyg kkgdwieipp tpnalvinvg dmlqilsngk yksaehrvrt
      301 tstssrvsip iftmpkettk ivplsqvvkk dgtalyrefv lidymknffg nahegkksld
      361 fakinlt
//
LOCUS       XP_016696811             367 aa            linear   PLN 06-AUG-2024
DEFINITION  scopoletin 8-hydroxylase [Gossypium hirsutum].
ACCESSION   XP_016696811
VERSION     XP_016696811.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696811.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..367
                     /product="scopoletin 8-hydroxylase"
                     /calculated_mol_wt=40678
     Region          13..360
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..367
                     /gene="LOC107912932"
                     /coded_by="XM_016841322.2:147..1250"
                     /db_xref="GeneID:107912932"
ORIGIN      
        1 mapnledrns vfefvvrqgn gvkglvdsgl stvpeayvqp peeridkena ikydlppidl
       61 skldgrgpdh devanqivra vetlgffqvv nhgvplhlle slkvsahyff slppqrkavy
      121 ladvspsplv kygtsyipek ekalgwkdyi lmqytnddea lqhwpqeike llleylrsst
      181 gmvkkllqvt lgnlgvkpdd smidvligkk mlsmifypic pnpdltlgvg rhsdigtftv
      241 llqdevggly vkieqdtgyg kkgdwilipp tpnalvinvg dmlqilsngk yksaehivct
      301 sstnsrvsvp ifimprettk iaplpqvvek dgiavykefv yvdymnkvfa naldgkksld
      361 fakispa
//
LOCUS       XP_016696814             343 aa            linear   PLN 06-AUG-2024
DEFINITION  post-GPI attachment to proteins factor 3 [Gossypium hirsutum].
ACCESSION   XP_016696814
VERSION     XP_016696814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841325.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..343
                     /product="post-GPI attachment to proteins factor 3"
                     /calculated_mol_wt=39320
     Region          71..331
                     /region_name="Per1"
                     /note="Per1-like family; pfam04080"
                     /db_xref="CDD:461161"
     CDS             1..343
                     /gene="LOC107912933"
                     /coded_by="XM_016841325.2:146..1177"
                     /db_xref="GeneID:107912933"
ORIGIN      
        1 mmidrysial flvfsylvgl ldasagdadp ryrgcvaece ktgcaggtcf phckfpsdgv
       61 andgpwymqe plylkwkqwd cqsdcryncm idrekereav ghgpvkyhgk wpftrvfgiq
      121 epasvafsal nlamhfhgwl sffillyynl plrqdkkayy eyaslwhiyg llamnswlws
      181 avfhsrdvdl tekldyssav allgyslivs ilrsfnvrve aarvmvaapf lafvtthily
      241 lnfytfdygw nmkvcvaigv aqlliwaiwv githhpsrwk lwvvvvgggl amlleiydfp
      301 pyqgffdaha iwhattiplt clwwsfirdd akfrtsillk kak
//
LOCUS       XP_016696815             843 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation factor 2 [Gossypium hirsutum].
ACCESSION   XP_016696815
VERSION     XP_016696815.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841326.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696815.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..843
                     /product="elongation factor 2"
                     /calculated_mol_wt=93971
     Region          1..843
                     /region_name="PLN00116"
                     /note="translation elongation factor EF-2 subunit;
                     Provisional"
                     /db_xref="CDD:177730"
     CDS             1..843
                     /gene="LOC107912934"
                     /coded_by="XM_016841326.2:227..2758"
                     /db_xref="GeneID:107912934"
ORIGIN      
        1 mvkftaeelr aimdrkhnir nmsviahvdh gkstltdslv aaagiiaqev agdvrmtdtr
       61 adeaergiti kstgislyye msddslmsyk gerqgneyli nlidspghvd fssevtaalr
      121 itdgalvvvd ciegvcvqte tvlrqalger irpvltvnkm drcflelqvd geeayqtfqr
      181 vienanvima tyedpllgdv qvypekgtva fsaglhgwaf tltnfakmya skfgvdeakm
      241 merlwgenff dpatkkwttk ntgsgtckrg fvqfcyepik qiintcmndq kdklwpmlqk
      301 lgvtmksdek dlmgkslmkr vmqtwlpass allemmifhl pspskaqkyr venlyegpld
      361 dvyanairnc dpegplmlyv skmipasdkg rfyafgrvfs gkvstglkvr imgpnyvpge
      421 kkdlyvksvq rtviwmgkkq etvedvpcgn tvamvgldqf itknatltne kevdahpira
      481 mkfsvspvvr vavqckvasd lpklveglkr laksdpmvvc tieesgehiv agagelhlei
      541 clkdlqedfm ggaeiiksdp vvsfretvle rscrtvmsks pnkhnrlyme arpleeglae
      601 aidegrigpr ddpkvrskil aeeygwdkdl akkiwcfgpe ttgpnmvvdm ckgvqylnei
      661 kdsvvagfqw askegamaee nmrgicfevc dvvlhtdaih rgggqiipta rrvfyasqlt
      721 akprllepvy lveiqapeqa lggiysvlnq krghvfeemq rpgtplynik aylpviesfg
      781 fsstlraats gqafpqcvfd hwdmmssdpl epgsqaanhv aeirkrkglk eqmtplsdye
      841 dkl
//
LOCUS       XP_040941321             419 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR45 [Gossypium hirsutum].
ACCESSION   XP_040941321
VERSION     XP_040941321.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085387.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="serine/arginine-rich splicing factor SR45"
                     /calculated_mol_wt=46190
     Region          117..188
                     /region_name="RRM_RNPS1"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein with serine-rich domain 1 (RNPS1) and similar
                     proteins; cd12365"
                     /db_xref="CDD:409800"
     Site            order(123..127,129..130,133..134,137..138,149,153..154,
                     174..184)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409800"
     CDS             1..419
                     /gene="LOC107911053"
                     /coded_by="XM_041085387.1:157..1416"
                     /db_xref="GeneID:107911053"
ORIGIN      
        1 makpttrgrr spsisgsssr srsrsksrsr sysgsdskss srsrsvsrsr saspsssrsr
       61 ssfssspsrs grsrsrsppk rrspvpgsrr gnspppqskk sspaprkasp ireslvlyvd
      121 slsrnvnegh lkeifsnfge vvnvdlamdr ilnlprgygy vefktradae kallyvdgaq
      181 idgnvvrakf tlpprpkvsp ppkpissaak gdvpksdnas adierggpkr presspqrks
      241 lpsprqgspv grrggsprrp pesprrrvds pvrrngetpp rrspaspvrg rsplspprrl
      301 rspprasprr mrspirrrsp pprrrspprr arspprrspl grrrsrspir rparsrsrsf
      361 sprrgkgpaa rrgrsssysr spsprkvprr isrsrsprrp lrgrsssnss sntspprkp
//
LOCUS       XP_016696816             785 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PAT1 homolog [Gossypium hirsutum].
ACCESSION   XP_016696816
VERSION     XP_016696816.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841327.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696816.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..785
                     /product="protein PAT1 homolog"
                     /calculated_mol_wt=87145
     Region          <170..>277
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          <193..>610
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..785
                     /gene="LOC107912935"
                     /coded_by="XM_016841327.2:370..2727"
                     /db_xref="GeneID:107912935"
ORIGIN      
        1 mdasedlkqf sdtdrggavf dasqyaffgn dvleevelgg ldgddedlpa agldeeeflf
       61 dqeeggvlra lsdiddlest fsklntavsr prgsgiigdr gsresssvae waqgeefpyw
      121 ldqhaleteg iperwssqps tnldpkhllr tssypephqq qpqqhhhlhf ssepilvpks
      181 sytsypppcg rspqaspnrq pghlnipymv ggsqmtsspd lssfsnsqpq mpglhhgshy
      241 ggnmnhlvpg lsvnsrasdq wgsqpklygg dgssvlnnml qqqlshqngl ippqlmpqlq
      301 vhqqrlqhpv qpsfnrlpgi qsqlfnphls lssppmnqfe avlgigdlrd hrpksahkgr
      361 qnprlsqqgf digwpqfrsk ymspdeiegi lrmqlaaths ndpyvddyyh qaclarksag
      421 aklrhhfcpt hlrdlpprar anaephaflq vdalgrvpfs sirrprplle vdppnssavn
      481 nndqkasdmp leqepmlaar vtiedglcll ldvddidrfl qfnqlqdgga qlrqrrqall
      541 eglaaslqlv dplgknghtd elaqkddlvf lrivslpkgr kllarylqll fpdgelmriv
      601 cmaifrhlrf lfgglpsdpg aaettsnlar vvsscvhhmd lrvlsfclaa vvcsseqppl
      661 rplgspagdg asfilkcvld ratklvtdfk aggdynisnq slwkasfdef fnlltkycvn
      721 kydtvmqslr mqvkpnmvid eadatkaikr empvdllhac lphineqqkk liwdlsqrsm
      781 lvgqs
//
LOCUS       XP_016696817            1013 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g04390 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016696817
VERSION     XP_016696817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1013
                     /product="BTB/POZ domain-containing protein At1g04390
                     isoform X1"
                     /calculated_mol_wt=114124
     Region          673..786
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          813..895
                     /region_name="BTB_POZ_ZBTB_KLHL-like"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing (ZBTB) proteins, Kelch-like (KLHL)
                     proteins, and similar proteins; cd18186"
                     /db_xref="CDD:349497"
     CDS             1..1013
                     /gene="LOC107912936"
                     /coded_by="XM_016841328.2:207..3248"
                     /db_xref="GeneID:107912936"
ORIGIN      
        1 mgsskrraad nsrggsstdh lptlhqrlkh alslgttrvs ddkerkwkct dleiqkhvvr
       61 slaafldsss ghasthrllk dsladiveal vwilhcksea ivgmavnvvv klvssnssmm
      121 qlyltdlinp lssllcsnnl evatscatal nmvlsnlsvk rekqvweivk eaktliqiir
      181 iirefpgvtq pienfqemvs llytilwqwp psryfvwkdt ilikvledsh ikshlstkva
      241 vlklcsalal cnkvakellg ngetiltmmv scmdvsepla vriegfrlaq hlvadeqrci
      301 kmtslcsgpl ikaiiggmrv wrlgsgkgvn dlvslldeac rlalitrwpg ehhnhfweqg
      361 idkvlldlll enfdkqaseh tltpqarisi aqqgldtnfl ialrpyiwei fgwlavhcrk
      421 dfrpstdrte lyidmlitca clsfveaick gcqisenddt srsesssrav lvmmhsssty
      481 iaskvrlils gvleikgnec lkrllylldy gssannfgsa nipktvvelv clicysglpe
      541 yqknvtrgdg irtlvtsirr clsngvctsr rsfalhfyhn vfyertccwm taeewegkda
      601 llfyslwgla elvqhssdtd hshiksnlik tvqevldnvs apgprwlaan ilsyfgvygf
      661 pnkhdkgfgr aledkehtdl qllfangesv svhkiilavq cpsllppeqf prsakttdnf
      721 lvkdvprkcc pmlrkevrfs arvdqqallk lldyvyfgyv eagedlarkl ktlakscnmq
      781 plylmlcrki pqwgtpipss dftdalgplg fqfadiilea eetekmpwac sfcslllphm
      841 hahkfilqsr ckylqalfls gmqeshsqsi kvpvsweali klvrliysrk lpdppfgclw
      901 dnmdtkerly elkpyvevyw laefwiledv qeacfttiis cldsdrqlal evmklaagfs
      961 lwklaevaad ymapiyhklr dsgvleqlde llielvrdas vrlsqgsggf phl
//
LOCUS       XP_016696818             866 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g04390 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016696818
VERSION     XP_016696818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..866
                     /product="BTB/POZ domain-containing protein At1g04390
                     isoform X2"
                     /calculated_mol_wt=97352
     Region          673..786
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          800..>864
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     CDS             1..866
                     /gene="LOC107912936"
                     /coded_by="XM_016841329.2:207..2807"
                     /db_xref="GeneID:107912936"
ORIGIN      
        1 mgsskrraad nsrggsstdh lptlhqrlkh alslgttrvs ddkerkwkct dleiqkhvvr
       61 slaafldsss ghasthrllk dsladiveal vwilhcksea ivgmavnvvv klvssnssmm
      121 qlyltdlinp lssllcsnnl evatscatal nmvlsnlsvk rekqvweivk eaktliqiir
      181 iirefpgvtq pienfqemvs llytilwqwp psryfvwkdt ilikvledsh ikshlstkva
      241 vlklcsalal cnkvakellg ngetiltmmv scmdvsepla vriegfrlaq hlvadeqrci
      301 kmtslcsgpl ikaiiggmrv wrlgsgkgvn dlvslldeac rlalitrwpg ehhnhfweqg
      361 idkvlldlll enfdkqaseh tltpqarisi aqqgldtnfl ialrpyiwei fgwlavhcrk
      421 dfrpstdrte lyidmlitca clsfveaick gcqisenddt srsesssrav lvmmhsssty
      481 iaskvrlils gvleikgnec lkrllylldy gssannfgsa nipktvvelv clicysglpe
      541 yqknvtrgdg irtlvtsirr clsngvctsr rsfalhfyhn vfyertccwm taeewegkda
      601 llfyslwgla elvqhssdtd hshiksnlik tvqevldnvs apgprwlaan ilsyfgvygf
      661 pnkhdkgfgr aledkehtdl qllfangesv svhkiilavq cpsllppeqf prsakttdnf
      721 lvkdvprkcc pmlrkevrfs arvdqqallk lldyvyfgyv eagedlarkl ktlakscnmq
      781 plylmlcrki pqwgtpipss dftdalgplg fqfadiilea eetekmpwac sfcslllphm
      841 hahkfilqsr ckylqalfls gmqerr
//
LOCUS       XP_016696819             822 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g04390 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016696819
VERSION     XP_016696819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..822
                     /product="BTB/POZ domain-containing protein At1g04390
                     isoform X3"
                     /calculated_mol_wt=92053
     Region          673..786
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     CDS             1..822
                     /gene="LOC107912936"
                     /coded_by="XM_016841330.2:207..2675"
                     /db_xref="GeneID:107912936"
ORIGIN      
        1 mgsskrraad nsrggsstdh lptlhqrlkh alslgttrvs ddkerkwkct dleiqkhvvr
       61 slaafldsss ghasthrllk dsladiveal vwilhcksea ivgmavnvvv klvssnssmm
      121 qlyltdlinp lssllcsnnl evatscatal nmvlsnlsvk rekqvweivk eaktliqiir
      181 iirefpgvtq pienfqemvs llytilwqwp psryfvwkdt ilikvledsh ikshlstkva
      241 vlklcsalal cnkvakellg ngetiltmmv scmdvsepla vriegfrlaq hlvadeqrci
      301 kmtslcsgpl ikaiiggmrv wrlgsgkgvn dlvslldeac rlalitrwpg ehhnhfweqg
      361 idkvlldlll enfdkqaseh tltpqarisi aqqgldtnfl ialrpyiwei fgwlavhcrk
      421 dfrpstdrte lyidmlitca clsfveaick gcqisenddt srsesssrav lvmmhsssty
      481 iaskvrlils gvleikgnec lkrllylldy gssannfgsa nipktvvelv clicysglpe
      541 yqknvtrgdg irtlvtsirr clsngvctsr rsfalhfyhn vfyertccwm taeewegkda
      601 llfyslwgla elvqhssdtd hshiksnlik tvqevldnvs apgprwlaan ilsyfgvygf
      661 pnkhdkgfgr aledkehtdl qllfangesv svhkiilavq cpsllppeqf prsakttdnf
      721 lvkdvprkcc pmlrkevrfs arvdqqallk lldyvyfgyv eagedlarkl ktlakscnmq
      781 plylmlcrki pqwgtpipss dftdalgplg fqfaclslsl fa
//
LOCUS       XP_016696821             218 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696821
VERSION     XP_016696821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24076
     Region          77..177
                     /region_name="SnoaL_2"
                     /note="SnoaL-like domain; pfam12680"
                     /db_xref="CDD:432716"
     CDS             1..218
                     /gene="LOC107912938"
                     /coded_by="XM_016841332.2:154..810"
                     /db_xref="GeneID:107912938"
ORIGIN      
        1 mllnstitpl csvhsripdl pnvftkalpy sttltapgkg sftsrtlikv fsssenqaav
       61 fdvasqpqde daaaevvrrf ydginrrdla svepliaekc vyedlifprp fvgreeilgf
      121 lksfidsisk dlqfviddis sedssavgvt whlewkgkaf pfskgcsfyr lqmvdgkrqi
      181 lygrdvvepa ikpgkaalga iravtwvlqq fpqladql
//
LOCUS       XP_016696822             364 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696822
VERSION     XP_016696822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..364
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40272
     CDS             1..364
                     /gene="LOC107912940"
                     /coded_by="XM_016841333.2:400..1494"
                     /db_xref="GeneID:107912940"
ORIGIN      
        1 masacvnnmg ispesfqpyg wlsrrmslsr ekelpksvpt dpvepelqet ppagdfefrl
       61 qdpvtnmlpa delfsngkll plhfsslkqq hhpsseiksp etskprrgmd mdpylfspra
      121 prcssrwrel lglkklsqnt nqphkpepqc skslkhflhr ssksssslnl pllkdsdses
      181 fsisssrlsl ssstsshehe hehedlprls ldsdkpspnp fapsrprmrm vkprgsettg
      241 gdrtgrrrsr rdattsrgvs vdsprmnssg kivfqslers ssspssfngg prfkqrgmer
      301 sysanvritp vlnvpvcslr gssksgyvfg fgnlfssspq ktangannns karqcnnsgi
      361 rnkt
//
LOCUS       XP_016696824             394 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016696824
VERSION     XP_016696824.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696824.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..394
                     /product="renalase isoform X1"
                     /calculated_mol_wt=42628
     Region          7..384
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..394
                     /gene="LOC107912941"
                     /coded_by="XM_016841335.2:174..1358"
                     /db_xref="GeneID:107912941"
ORIGIN      
        1 mqntvakvav vgsgisgsvc aatlarngis vilfdsargp ggrmsqrrei sedgrellfd
       61 hgapyftvtn pdvlsvvtew esrglvaewk snfgsfdcft nkfvntehqe reskkyvgvp
      121 gmnsickalc hepgvdskfn mgigkfewle henlwsligl dgqhlghfkg vvasdknias
      181 prftaitgqp ppldiitkvi qelsnncgyh ksqlylagdl slapelvklh dipidpcfal
      241 mlgfneplsl vpanglsftn skvlsrahce sskpgrssts erwvlhstte yakdviaqsg
      301 lekpsketls kvgnemlqef lgtgltipqp ffmkahrwgs afpatsiake ekcvwsekkk
      361 laicgdfcls pnvegailsg laaasklkgl igtl
//
LOCUS       XP_016696825             369 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016696825
VERSION     XP_016696825.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841336.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696825.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..369
                     /product="renalase isoform X2"
                     /calculated_mol_wt=39838
     Region          7..359
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..369
                     /gene="LOC107912941"
                     /coded_by="XM_016841336.2:174..1283"
                     /db_xref="GeneID:107912941"
ORIGIN      
        1 mqntvakvav vgsgisgsvc aatlarngis vilfdsargp ggrmsqrrei sedgrellfd
       61 hgapyftvtn pdvlsvvtew esrglvaewk snfgsfdcft nkfvntehqe reskkyvgvp
      121 gmnsickalc hepgvdskfn mgigkfewle henlwsligl dgqhlghfkg vvasdknias
      181 prftaitgqp ppldlslape lvklhdipid pcfalmlgfn eplslvpang lsftnskvls
      241 rahcesskpg rsstserwvl hstteyakdv iaqsglekps ketlskvgne mlqeflgtgl
      301 tipqpffmka hrwgsafpat siakeekcvw sekkklaicg dfclspnveg ailsglaaas
      361 klkgligtl
//
LOCUS       XP_040941323             358 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941323
VERSION     XP_040941323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085389.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="renalase isoform X3"
                     /calculated_mol_wt=39080
     Region          7..337
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..358
                     /gene="LOC107912941"
                     /coded_by="XM_041085389.1:174..1250"
                     /db_xref="GeneID:107912941"
ORIGIN      
        1 mqntvakvav vgsgisgsvc aatlarngis vilfdsargp ggrmsqrrei sedgrellfd
       61 hgapyftvtn pdvlsvvtew esrglvaewk snfgsfdcft nkfvntehqe reskkyvgvp
      121 gmnsickalc hepgvdskfn mgigkfewle henlwsligl dgqhlghfkg vvasdknias
      181 prftaitgqp ppldiitkvi qelsnncgyh ksqlylagdl slapelvklh dipidpcfal
      241 mlgfneplsl vpanglsftn skvlsrahce sskpgrssts erwvlhstte yakdviaqsg
      301 lekpsketls kvgnemlqef lgtgltipqp ffmkahrclq gkclpsnkhs qgremcle
//
LOCUS       XP_040941324             351 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941324
VERSION     XP_040941324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085390.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..351
                     /product="renalase isoform X4"
                     /calculated_mol_wt=38457
     Region          1..341
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..351
                     /gene="LOC107912941"
                     /coded_by="XM_041085390.1:211..1266"
                     /db_xref="GeneID:107912941"
ORIGIN      
        1 msqrreised grellfdhga pyftvtnpdv lsvvtewesr glvaewksnf gsfdcftnkf
       61 vntehqeres kkyvgvpgmn sickalchep gvdskfnmgi gkfewlehen lwsligldgq
      121 hlghfkgvva sdkniasprf taitgqpppl diitkviqel snncgyhksq lylagdlsla
      181 pelvklhdip idpcfalmlg fneplslvpa nglsftnskv lsrahcessk pgrsstserw
      241 vlhstteyak dviaqsglek psketlskvg nemlqeflgt gltipqpffm kahrwgsafp
      301 atsiakeekc vwsekkklai cgdfclspnv egailsglaa asklkgligt l
//
LOCUS       XP_016696826             275 aa            linear   PLN 06-AUG-2024
DEFINITION  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_016696826
VERSION     XP_016696826.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696826.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
                     peroxisomal"
                     /calculated_mol_wt=29599
     Region          3..275
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(30,32,64,68..72,121,123..125,147..148,151)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(70,125)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(105,113,134..137,149..152,158,160..162,164..165,
                     170..171,173..174,176..177,180,191,194,210,213..214)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..275
                     /gene="LOC107912942"
                     /coded_by="XM_016841337.2:207..1034"
                     /db_xref="GeneID:107912942"
ORIGIN      
        1 meekyetlki qqespnsgvf nliinrpsvs nalglnffse fpkvlnaldq nptvavivls
       61 gsgnhfcggi dlkslaamad dnsgdqgrts erlrrkikfl qdaitamerc rkpviaaihg
      121 aclglginiv tacdiryctk daifsvkevd laitadlgtl qrlpgivgfg kamelsltgr
      181 rfsgdeakel glvsrvfgsr eelkegvrti aegiggkppl avvgtkavli rsrdvnveqg
      241 ldyvatwnss mllsedltea ssaqkqkrkp tfakl
//
LOCUS       XP_040941325             275 aa            linear   PLN 06-AUG-2024
DEFINITION  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_040941325
VERSION     XP_040941325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085391.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
                     peroxisomal"
                     /calculated_mol_wt=29599
     Region          3..275
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(30,32,64,68..72,121,123..125,147..148,151)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(70,125)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(105,113,134..137,149..152,158,160..162,164..165,
                     170..171,173..174,176..177,180,191,194,210,213..214)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..275
                     /gene="LOC107912942"
                     /coded_by="XM_041085391.1:536..1363"
                     /db_xref="GeneID:107912942"
ORIGIN      
        1 meekyetlki qqespnsgvf nliinrpsvs nalglnffse fpkvlnaldq nptvavivls
       61 gsgnhfcggi dlkslaamad dnsgdqgrts erlrrkikfl qdaitamerc rkpviaaihg
      121 aclglginiv tacdiryctk daifsvkevd laitadlgtl qrlpgivgfg kamelsltgr
      181 rfsgdeakel glvsrvfgsr eelkegvrti aegiggkppl avvgtkavli rsrdvnveqg
      241 ldyvatwnss mllsedltea ssaqkqkrkp tfakl
//
LOCUS       XP_040941326             275 aa            linear   PLN 06-AUG-2024
DEFINITION  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_040941326
VERSION     XP_040941326.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085392.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
                     peroxisomal"
                     /calculated_mol_wt=29599
     Region          3..275
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(30,32,64,68..72,121,123..125,147..148,151)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(70,125)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(105,113,134..137,149..152,158,160..162,164..165,
                     170..171,173..174,176..177,180,191,194,210,213..214)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..275
                     /gene="LOC107912942"
                     /coded_by="XM_041085392.1:238..1065"
                     /db_xref="GeneID:107912942"
ORIGIN      
        1 meekyetlki qqespnsgvf nliinrpsvs nalglnffse fpkvlnaldq nptvavivls
       61 gsgnhfcggi dlkslaamad dnsgdqgrts erlrrkikfl qdaitamerc rkpviaaihg
      121 aclglginiv tacdiryctk daifsvkevd laitadlgtl qrlpgivgfg kamelsltgr
      181 rfsgdeakel glvsrvfgsr eelkegvrti aegiggkppl avvgtkavli rsrdvnveqg
      241 ldyvatwnss mllsedltea ssaqkqkrkp tfakl
//
LOCUS       XP_016696827             553 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696827
VERSION     XP_016696827.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696827.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..553
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=63290
     Region          <68..187
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          385..481
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..553
                     /gene="LOC107912943"
                     /coded_by="XM_016841338.2:630..2291"
                     /db_xref="GeneID:107912943"
ORIGIN      
        1 mediglyeqg wkwlksqkhv yskaktavgc frdkmgllie khwpmvcsaf lnlwkfsrll
       61 lvywkdclvr gfqscsrlgs asllvimwsc flsltsmscl lylllsmgaa gaaiqnlgyt
      121 pglfivglfs ililwmyanf wmtgtlfivg gymfslshar livliattys iyfvkvrvgw
      181 lgvflsinla flsndvlnyl vqrfdnvset ahyeepkesk pvmeedlsge ceysnpsids
      241 ekvqpcksss ksattsvinq kevsakrvvk eetssademt rilnctdhyq algiprhtki
      301 dtavlkkeyk kkamlvhpdk nmgsplases fkklqcayev lsdstkkrdy deelrkeesr
      361 trgvcqeshg ssrqqpspdy cseesrriqc tkcgnshiwv ctnrnkakar wcqdccqyhq
      421 akdgdgwvey kgslvfdrpq kveiprafvc aeskifdvse waicqgmacr pnthrpsfhv
      481 nmvglektqr sntsrypwdl daemidedee felwlqqala sglfcetskr rkswspfklp
      541 qkkskrqwrr sst
//
LOCUS       XP_040941327             552 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941327
VERSION     XP_040941327.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085393.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..552
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=63162
     Region          <68..187
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          384..480
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..552
                     /gene="LOC107912943"
                     /coded_by="XM_041085393.1:554..2212"
                     /db_xref="GeneID:107912943"
ORIGIN      
        1 mediglyeqg wkwlksqkhv yskaktavgc frdkmgllie khwpmvcsaf lnlwkfsrll
       61 lvywkdclvr gfqscsrlgs asllvimwsc flsltsmscl lylllsmgaa gaaiqnlgyt
      121 pglfivglfs ililwmyanf wmtgtlfivg gymfslshar livliattys iyfvkvrvgw
      181 lgvflsinla flsndvlnyl vqrfdnvset ahyeepkesk pvmeedlsge ceysnpsids
      241 ekvqpcksss ksattsvinq kevsakrvvk eetssademt rilnctdhyq algiprhtki
      301 dtavlkkeyk kkamlvhpdk nmgsplases fkklqcayev lsdstkkrdy deelrkeesr
      361 trgvcqeshg ssrqpspdyc seesrriqct kcgnshiwvc tnrnkakarw cqdccqyhqa
      421 kdgdgwveyk gslvfdrpqk veiprafvca eskifdvsew aicqgmacrp nthrpsfhvn
      481 mvglektqrs ntsrypwdld aemidedeef elwlqqalas glfcetskrr kswspfklpq
      541 kkskrqwrrs st
//
LOCUS       XP_040941328             509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941328
VERSION     XP_040941328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085394.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..509
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=58143
     Region          <68..187
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          385..>429
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..509
                     /gene="LOC107912943"
                     /coded_by="XM_041085394.1:458..1987"
                     /db_xref="GeneID:107912943"
ORIGIN      
        1 mediglyeqg wkwlksqkhv yskaktavgc frdkmgllie khwpmvcsaf lnlwkfsrll
       61 lvywkdclvr gfqscsrlgs asllvimwsc flsltsmscl lylllsmgaa gaaiqnlgyt
      121 pglfivglfs ililwmyanf wmtgtlfivg gymfslshar livliattys iyfvkvrvgw
      181 lgvflsinla flsndvlnyl vqrfdnvset ahyeepkesk pvmeedlsge ceysnpsids
      241 ekvqpcksss ksattsvinq kevsakrvvk eetssademt rilnctdhyq algiprhtki
      301 dtavlkkeyk kkamlvhpdk nmgsplases fkklqcayev lsdstkkrdy deelrkeesr
      361 trgvcqeshg ssrqqpspdy cseesrriqc tkcgnshiwv ctnrnkakar wcqdccqyhq
      421 akdgdgwvey kgslvfdrpq kkqlhllvlk qlltlsimct wmfkipdgqf qgfpfvipvf
      481 ydwtsanqne sqllnnkmwg niteiifed
//
LOCUS       XP_040941329             509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941329
VERSION     XP_040941329.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085395.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..509
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=58143
     Region          <68..187
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          385..>429
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..509
                     /gene="LOC107912943"
                     /coded_by="XM_041085395.1:562..2091"
                     /db_xref="GeneID:107912943"
ORIGIN      
        1 mediglyeqg wkwlksqkhv yskaktavgc frdkmgllie khwpmvcsaf lnlwkfsrll
       61 lvywkdclvr gfqscsrlgs asllvimwsc flsltsmscl lylllsmgaa gaaiqnlgyt
      121 pglfivglfs ililwmyanf wmtgtlfivg gymfslshar livliattys iyfvkvrvgw
      181 lgvflsinla flsndvlnyl vqrfdnvset ahyeepkesk pvmeedlsge ceysnpsids
      241 ekvqpcksss ksattsvinq kevsakrvvk eetssademt rilnctdhyq algiprhtki
      301 dtavlkkeyk kkamlvhpdk nmgsplases fkklqcayev lsdstkkrdy deelrkeesr
      361 trgvcqeshg ssrqqpspdy cseesrriqc tkcgnshiwv ctnrnkakar wcqdccqyhq
      421 akdgdgwvey kgslvfdrpq kkqlhllvlk qlltlsimct wmfkipdgqf qgfpfvipvf
      481 ydwtsanqne sqllnnkmwg niteiifed
//
LOCUS       XP_040941330             486 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941330
VERSION     XP_040941330.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085396.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=55568
     Region          <68..187
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          385..>454
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..486
                     /gene="LOC107912943"
                     /coded_by="XM_041085396.1:557..2017"
                     /db_xref="GeneID:107912943"
ORIGIN      
        1 mediglyeqg wkwlksqkhv yskaktavgc frdkmgllie khwpmvcsaf lnlwkfsrll
       61 lvywkdclvr gfqscsrlgs asllvimwsc flsltsmscl lylllsmgaa gaaiqnlgyt
      121 pglfivglfs ililwmyanf wmtgtlfivg gymfslshar livliattys iyfvkvrvgw
      181 lgvflsinla flsndvlnyl vqrfdnvset ahyeepkesk pvmeedlsge ceysnpsids
      241 ekvqpcksss ksattsvinq kevsakrvvk eetssademt rilnctdhyq algiprhtki
      301 dtavlkkeyk kkamlvhpdk nmgsplases fkklqcayev lsdstkkrdy deelrkeesr
      361 trgvcqeshg ssrqqpspdy cseesrriqc tkcgnshiwv ctnrnkakar wcqdccqyhq
      421 akdgdgwvey kgslvfdrpq kfahlsfrwk yhvllfvpra rslmfqnglf vrewhvdqtp
      481 idlasm
//
LOCUS       XP_040941331             472 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941331
VERSION     XP_040941331.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085397.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..472
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=53773
     Region          <68..187
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          385..>429
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..472
                     /gene="LOC107912943"
                     /coded_by="XM_041085397.1:562..1980"
                     /db_xref="GeneID:107912943"
ORIGIN      
        1 mediglyeqg wkwlksqkhv yskaktavgc frdkmgllie khwpmvcsaf lnlwkfsrll
       61 lvywkdclvr gfqscsrlgs asllvimwsc flsltsmscl lylllsmgaa gaaiqnlgyt
      121 pglfivglfs ililwmyanf wmtgtlfivg gymfslshar livliattys iyfvkvrvgw
      181 lgvflsinla flsndvlnyl vqrfdnvset ahyeepkesk pvmeedlsge ceysnpsids
      241 ekvqpcksss ksattsvinq kevsakrvvk eetssademt rilnctdhyq algiprhtki
      301 dtavlkkeyk kkamlvhpdk nmgsplases fkklqcayev lsdstkkrdy deelrkeesr
      361 trgvcqeshg ssrqqpspdy cseesrriqc tkcgnshiwv ctnrnkakar wcqdccqyhq
      421 akdgdgwvey kgslvfdrpq kkqlhllflk qfltlsikct wvfktpdgqf qg
//
LOCUS       XP_016696828             367 aa            linear   PLN 06-AUG-2024
DEFINITION  codeine O-demethylase [Gossypium hirsutum].
ACCESSION   XP_016696828
VERSION     XP_016696828.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841339.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696828.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..367
                     /product="codeine O-demethylase"
                     /calculated_mol_wt=41821
     Region          23..360
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..367
                     /gene="LOC107912944"
                     /coded_by="XM_016841339.2:58..1161"
                     /db_xref="GeneID:107912944"
ORIGIN      
        1 mgssssyted dfstsafdps tfsvqelvkl aapdfsipqp fvrinqqpps lsvstplppt
       61 mdmsrllled dhqklelhkl hstcqdwgif qlvnhgvsss lleklkheve efyrlpleek
      121 lkykigergw egygrrmrad gkydwvdtln iitnplhmrs phvfpqlppp lrstmecyls
      181 elqklatkli gfmgkalkik ekemmelfdd glqavkmayy ppcphpesvm gliphsdmtl
      241 ltilhqlngv dgleikkngl wfpfnvnpda fvvnvgdife ifsngvyhsv ehkvtcnker
      301 eritvtfnls pnfetevgps lslinaenpp lfrrvgmedy ckqfstlkvy gkkyldymri
      361 qpsengd
//
LOCUS       XP_016696830             367 aa            linear   PLN 06-AUG-2024
DEFINITION  codeine O-demethylase [Gossypium hirsutum].
ACCESSION   XP_016696830
VERSION     XP_016696830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..367
                     /product="codeine O-demethylase"
                     /calculated_mol_wt=42000
     Region          23..360
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..367
                     /gene="LOC107912945"
                     /coded_by="XM_016841341.2:116..1219"
                     /db_xref="GeneID:107912945"
ORIGIN      
        1 mgssssyted dfstsafdps tfsvqelvkl aapdfsipqp fvrinqqsps lsvttplppt
       61 idmsrllled dhhnlelhkl hatcqdwgif qlvnhgvsss lleklkheve efyrlpleek
      121 lkykvregel egygrrtrgd gkydwvdtfn iitnplhrrr phlfpqlpps lrstmecyls
      181 elqklatkli gfmgkalkik ekemmelfdd glqavrmayy ppcpqpesvm glfphsdmtl
      241 ltilhqlngv dglevkkngl wfpfnvnpda fvvnvgdifq ifsngvyhsi ehkvtcnker
      301 eritvtfnls pnfeaevgps lsvinaenpp lfrrvgmeey fkqfftlkiy gkkyldymri
      361 epsengd
//
LOCUS       XP_016696832            1069 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696832
VERSION     XP_016696832.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696832.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1069
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=119062
     Region          759..1064
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1069
                     /gene="LOC107912947"
                     /coded_by="XM_016841343.2:163..3372"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mscgirgnhl hnnnskvtev gkgsrlqlng yrrspqdsri ssfnfrnidq rcailtfptl
       61 ecdgqwriva lplqyfdhtn rfgtgtqvnm nglhllssps intfkldghd tqkgpqpdhi
      121 phaampfrtr slpgsnvqqq frnkplpnnt tqlsytssth ssndssavts kgsnatmfid
      181 cpeedksakr nsqkngrkkg khkkkhlcdv gsmesevcae ytcgsstsei cesssgvvts
      241 sqsqnicrgd idevetpesi apskahkfsg ehhtdsyeig sedqqlsrcq gdierrhpsh
      301 hkvfsdmhds lvldsisvgs nseegmsggh ivnpfndynh eisqlevsgs stnkgslyre
      361 nsscsisrtc dyteetkhgm arkcfdgrkv apskrdkqfk svpgkpgstg nlhtrtgien
      421 gysvwqrvqk nsvekcntel kktspvcsqf dvalkdaplq krncnnassp ttvpitddkr
      481 klknkvpkkl krkvspspkq esgiysrkes lpnkvnlnay aktsipnggi sddlssmddn
      541 gviknhsrss sqpgyarvdt lksesvsdfe vglcsmepce nacdatsgfn iqdsieknsh
      601 vpsdqstlve aetpvylphl mvngvaqtek ssvaengkqs htlgsvlwkw ipigikdcgf
      661 tssrsanssf ehgnglgpdv edrtsmynsf eekfapcskn lspsmnvgrm sssirnktke
      721 enlsagandl nkiakalndg ykaqmaseav qmtsggpiae ferllhfcsp vichsyssvr
      781 cqhclldkvp sallcrhetp niplrclwtw yekhgsygle ikaedyenpk rlgidqvefr
      841 ayfvpflsav qlfrntktys tprgseacdt dpndqsqvyd mksvdmelvf eyfeseqphq
      901 rralyetiqq lvnddvstrc kmygdpvhln sinmldlhpq swysvawypi yripdgnfra
      961 afltyhslsh fvcrsskfdy astvdacivs pvvglksyna qgecwfqprh tttnimyenl
     1021 glspsrilke rsrtleetas lmaravvikg nqtsvnrhpd yeffmsrqr
//
LOCUS       XP_016696833            1069 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696833
VERSION     XP_016696833.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696833.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1069
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=119062
     Region          759..1064
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1069
                     /gene="LOC107912947"
                     /coded_by="XM_016841344.2:537..3746"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mscgirgnhl hnnnskvtev gkgsrlqlng yrrspqdsri ssfnfrnidq rcailtfptl
       61 ecdgqwriva lplqyfdhtn rfgtgtqvnm nglhllssps intfkldghd tqkgpqpdhi
      121 phaampfrtr slpgsnvqqq frnkplpnnt tqlsytssth ssndssavts kgsnatmfid
      181 cpeedksakr nsqkngrkkg khkkkhlcdv gsmesevcae ytcgsstsei cesssgvvts
      241 sqsqnicrgd idevetpesi apskahkfsg ehhtdsyeig sedqqlsrcq gdierrhpsh
      301 hkvfsdmhds lvldsisvgs nseegmsggh ivnpfndynh eisqlevsgs stnkgslyre
      361 nsscsisrtc dyteetkhgm arkcfdgrkv apskrdkqfk svpgkpgstg nlhtrtgien
      421 gysvwqrvqk nsvekcntel kktspvcsqf dvalkdaplq krncnnassp ttvpitddkr
      481 klknkvpkkl krkvspspkq esgiysrkes lpnkvnlnay aktsipnggi sddlssmddn
      541 gviknhsrss sqpgyarvdt lksesvsdfe vglcsmepce nacdatsgfn iqdsieknsh
      601 vpsdqstlve aetpvylphl mvngvaqtek ssvaengkqs htlgsvlwkw ipigikdcgf
      661 tssrsanssf ehgnglgpdv edrtsmynsf eekfapcskn lspsmnvgrm sssirnktke
      721 enlsagandl nkiakalndg ykaqmaseav qmtsggpiae ferllhfcsp vichsyssvr
      781 cqhclldkvp sallcrhetp niplrclwtw yekhgsygle ikaedyenpk rlgidqvefr
      841 ayfvpflsav qlfrntktys tprgseacdt dpndqsqvyd mksvdmelvf eyfeseqphq
      901 rralyetiqq lvnddvstrc kmygdpvhln sinmldlhpq swysvawypi yripdgnfra
      961 afltyhslsh fvcrsskfdy astvdacivs pvvglksyna qgecwfqprh tttnimyenl
     1021 glspsrilke rsrtleetas lmaravvikg nqtsvnrhpd yeffmsrqr
//
LOCUS       XP_040941332            1069 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941332
VERSION     XP_040941332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085398.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1069
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=119062
     Region          759..1064
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1069
                     /gene="LOC107912947"
                     /coded_by="XM_041085398.1:163..3372"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mscgirgnhl hnnnskvtev gkgsrlqlng yrrspqdsri ssfnfrnidq rcailtfptl
       61 ecdgqwriva lplqyfdhtn rfgtgtqvnm nglhllssps intfkldghd tqkgpqpdhi
      121 phaampfrtr slpgsnvqqq frnkplpnnt tqlsytssth ssndssavts kgsnatmfid
      181 cpeedksakr nsqkngrkkg khkkkhlcdv gsmesevcae ytcgsstsei cesssgvvts
      241 sqsqnicrgd idevetpesi apskahkfsg ehhtdsyeig sedqqlsrcq gdierrhpsh
      301 hkvfsdmhds lvldsisvgs nseegmsggh ivnpfndynh eisqlevsgs stnkgslyre
      361 nsscsisrtc dyteetkhgm arkcfdgrkv apskrdkqfk svpgkpgstg nlhtrtgien
      421 gysvwqrvqk nsvekcntel kktspvcsqf dvalkdaplq krncnnassp ttvpitddkr
      481 klknkvpkkl krkvspspkq esgiysrkes lpnkvnlnay aktsipnggi sddlssmddn
      541 gviknhsrss sqpgyarvdt lksesvsdfe vglcsmepce nacdatsgfn iqdsieknsh
      601 vpsdqstlve aetpvylphl mvngvaqtek ssvaengkqs htlgsvlwkw ipigikdcgf
      661 tssrsanssf ehgnglgpdv edrtsmynsf eekfapcskn lspsmnvgrm sssirnktke
      721 enlsagandl nkiakalndg ykaqmaseav qmtsggpiae ferllhfcsp vichsyssvr
      781 cqhclldkvp sallcrhetp niplrclwtw yekhgsygle ikaedyenpk rlgidqvefr
      841 ayfvpflsav qlfrntktys tprgseacdt dpndqsqvyd mksvdmelvf eyfeseqphq
      901 rralyetiqq lvnddvstrc kmygdpvhln sinmldlhpq swysvawypi yripdgnfra
      961 afltyhslsh fvcrsskfdy astvdacivs pvvglksyna qgecwfqprh tttnimyenl
     1021 glspsrilke rsrtleetas lmaravvikg nqtsvnrhpd yeffmsrqr
//
LOCUS       XP_016696836            1026 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696836
VERSION     XP_016696836.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841347.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696836.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1026
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=114212
     Region          716..1021
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1026
                     /gene="LOC107912947"
                     /coded_by="XM_016841347.2:248..3328"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mviedhprca iltfptlecd gqwrivalpl qyfdhtnrfg tgtqvnmngl hllsspsint
       61 fkldghdtqk gpqpdhipha ampfrtrslp gsnvqqqfrn kplpnnttql sytssthssn
      121 dssavtskgs natmfidcpe edksakrnsq kngrkkgkhk kkhlcdvgsm esevcaeytc
      181 gsstseices ssgvvtssqs qnicrgdide vetpesiaps kahkfsgehh tdsyeigsed
      241 qqlsrcqgdi errhpshhkv fsdmhdslvl dsisvgsnse egmsgghivn pfndynheis
      301 qlevsgsstn kgslyrenss csisrtcdyt eetkhgmark cfdgrkvaps krdkqfksvp
      361 gkpgstgnlh trtgiengys vwqrvqknsv ekcntelkkt spvcsqfdva lkdaplqkrn
      421 cnnasspttv pitddkrklk nkvpkklkrk vspspkqesg iysrkeslpn kvnlnayakt
      481 sipnggisdd lssmddngvi knhsrsssqp gyarvdtlks esvsdfevgl csmepcenac
      541 datsgfniqd sieknshvps dqstlveaet pvylphlmvn gvaqtekssv aengkqshtl
      601 gsvlwkwipi gikdcgftss rsanssfehg nglgpdvedr tsmynsfeek fapcsknlsp
      661 smnvgrmsss irnktkeenl sagandlnki akalndgyka qmaseavqmt sggpiaefer
      721 llhfcspvic hsyssvrcqh clldkvpsal lcrhetpnip lrclwtwyek hgsygleika
      781 edyenpkrlg idqvefrayf vpflsavqlf rntktystpr gseacdtdpn dqsqvydmks
      841 vdmelvfeyf eseqphqrra lyetiqqlvn ddvstrckmy gdpvhlnsin mldlhpqswy
      901 svawypiyri pdgnfraafl tyhslshfvc rsskfdyast vdacivspvv glksynaqge
      961 cwfqprhttt nimyenlgls psrilkersr tleetaslma ravvikgnqt svnrhpdyef
     1021 fmsrqr
//
LOCUS       XP_040941333            1026 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941333
VERSION     XP_040941333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085399.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1026
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=114212
     Region          716..1021
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1026
                     /gene="LOC107912947"
                     /coded_by="XM_041085399.1:499..3579"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mviedhprca iltfptlecd gqwrivalpl qyfdhtnrfg tgtqvnmngl hllsspsint
       61 fkldghdtqk gpqpdhipha ampfrtrslp gsnvqqqfrn kplpnnttql sytssthssn
      121 dssavtskgs natmfidcpe edksakrnsq kngrkkgkhk kkhlcdvgsm esevcaeytc
      181 gsstseices ssgvvtssqs qnicrgdide vetpesiaps kahkfsgehh tdsyeigsed
      241 qqlsrcqgdi errhpshhkv fsdmhdslvl dsisvgsnse egmsgghivn pfndynheis
      301 qlevsgsstn kgslyrenss csisrtcdyt eetkhgmark cfdgrkvaps krdkqfksvp
      361 gkpgstgnlh trtgiengys vwqrvqknsv ekcntelkkt spvcsqfdva lkdaplqkrn
      421 cnnasspttv pitddkrklk nkvpkklkrk vspspkqesg iysrkeslpn kvnlnayakt
      481 sipnggisdd lssmddngvi knhsrsssqp gyarvdtlks esvsdfevgl csmepcenac
      541 datsgfniqd sieknshvps dqstlveaet pvylphlmvn gvaqtekssv aengkqshtl
      601 gsvlwkwipi gikdcgftss rsanssfehg nglgpdvedr tsmynsfeek fapcsknlsp
      661 smnvgrmsss irnktkeenl sagandlnki akalndgyka qmaseavqmt sggpiaefer
      721 llhfcspvic hsyssvrcqh clldkvpsal lcrhetpnip lrclwtwyek hgsygleika
      781 edyenpkrlg idqvefrayf vpflsavqlf rntktystpr gseacdtdpn dqsqvydmks
      841 vdmelvfeyf eseqphqrra lyetiqqlvn ddvstrckmy gdpvhlnsin mldlhpqswy
      901 svawypiyri pdgnfraafl tyhslshfvc rsskfdyast vdacivspvv glksynaqge
      961 cwfqprhttt nimyenlgls psrilkersr tleetaslma ravvikgnqt svnrhpdyef
     1021 fmsrqr
//
LOCUS       XP_016696837            1007 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696837
VERSION     XP_016696837.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841348.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696837.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1007
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=111970
     Region          697..1002
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1007
                     /gene="LOC107912947"
                     /coded_by="XM_016841348.2:248..3271"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mviedhprip efllsilgtl irgtqvnmng lhllsspsin tfkldghdtq kgpqpdhiph
       61 aampfrtrsl pgsnvqqqfr nkplpnnttq lsytssthss ndssavtskg snatmfidcp
      121 eedksakrns qkngrkkgkh kkkhlcdvgs mesevcaeyt cgsstseice sssgvvtssq
      181 sqnicrgdid evetpesiap skahkfsgeh htdsyeigse dqqlsrcqgd ierrhpshhk
      241 vfsdmhdslv ldsisvgsns eegmsgghiv npfndynhei sqlevsgsst nkgslyrens
      301 scsisrtcdy teetkhgmar kcfdgrkvap skrdkqfksv pgkpgstgnl htrtgiengy
      361 svwqrvqkns vekcntelkk tspvcsqfdv alkdaplqkr ncnnassptt vpitddkrkl
      421 knkvpkklkr kvspspkqes giysrkeslp nkvnlnayak tsipnggisd dlssmddngv
      481 iknhsrsssq pgyarvdtlk sesvsdfevg lcsmepcena cdatsgfniq dsieknshvp
      541 sdqstlveae tpvylphlmv ngvaqtekss vaengkqsht lgsvlwkwip igikdcgfts
      601 srsanssfeh gnglgpdved rtsmynsfee kfapcsknls psmnvgrmss sirnktkeen
      661 lsagandlnk iakalndgyk aqmaseavqm tsggpiaefe rllhfcspvi chsyssvrcq
      721 hclldkvpsa llcrhetpni plrclwtwye khgsygleik aedyenpkrl gidqvefray
      781 fvpflsavql frntktystp rgseacdtdp ndqsqvydmk svdmelvfey feseqphqrr
      841 alyetiqqlv nddvstrckm ygdpvhlnsi nmldlhpqsw ysvawypiyr ipdgnfraaf
      901 ltyhslshfv crsskfdyas tvdacivspv vglksynaqg ecwfqprhtt tnimyenlgl
      961 spsrilkers rtleetaslm aravvikgnq tsvnrhpdye ffmsrqr
//
LOCUS       XP_040941334            1007 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941334
VERSION     XP_040941334.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085400.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1007
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=111970
     Region          697..1002
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..1007
                     /gene="LOC107912947"
                     /coded_by="XM_041085400.1:622..3645"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mviedhprip efllsilgtl irgtqvnmng lhllsspsin tfkldghdtq kgpqpdhiph
       61 aampfrtrsl pgsnvqqqfr nkplpnnttq lsytssthss ndssavtskg snatmfidcp
      121 eedksakrns qkngrkkgkh kkkhlcdvgs mesevcaeyt cgsstseice sssgvvtssq
      181 sqnicrgdid evetpesiap skahkfsgeh htdsyeigse dqqlsrcqgd ierrhpshhk
      241 vfsdmhdslv ldsisvgsns eegmsgghiv npfndynhei sqlevsgsst nkgslyrens
      301 scsisrtcdy teetkhgmar kcfdgrkvap skrdkqfksv pgkpgstgnl htrtgiengy
      361 svwqrvqkns vekcntelkk tspvcsqfdv alkdaplqkr ncnnassptt vpitddkrkl
      421 knkvpkklkr kvspspkqes giysrkeslp nkvnlnayak tsipnggisd dlssmddngv
      481 iknhsrsssq pgyarvdtlk sesvsdfevg lcsmepcena cdatsgfniq dsieknshvp
      541 sdqstlveae tpvylphlmv ngvaqtekss vaengkqsht lgsvlwkwip igikdcgfts
      601 srsanssfeh gnglgpdved rtsmynsfee kfapcsknls psmnvgrmss sirnktkeen
      661 lsagandlnk iakalndgyk aqmaseavqm tsggpiaefe rllhfcspvi chsyssvrcq
      721 hclldkvpsa llcrhetpni plrclwtwye khgsygleik aedyenpkrl gidqvefray
      781 fvpflsavql frntktystp rgseacdtdp ndqsqvydmk svdmelvfey feseqphqrr
      841 alyetiqqlv nddvstrckm ygdpvhlnsi nmldlhpqsw ysvawypiyr ipdgnfraaf
      901 ltyhslshfv crsskfdyas tvdacivspv vglksynaqg ecwfqprhtt tnimyenlgl
      961 spsrilkers rtleetaslm aravvikgnq tsvnrhpdye ffmsrqr
//
LOCUS       XP_040941335             980 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941335
VERSION     XP_040941335.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085401.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..980
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=108925
     Region          670..975
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..980
                     /gene="LOC107912947"
                     /coded_by="XM_041085401.1:231..3173"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mnglhllssp sintfkldgh dtqkgpqpdh iphaampfrt rslpgsnvqq qfrnkplpnn
       61 ttqlsytsst hssndssavt skgsnatmfi dcpeedksak rnsqkngrkk gkhkkkhlcd
      121 vgsmesevca eytcgsstse icesssgvvt ssqsqnicrg didevetpes iapskahkfs
      181 gehhtdsyei gsedqqlsrc qgdierrhps hhkvfsdmhd slvldsisvg snseegmsgg
      241 hivnpfndyn heisqlevsg sstnkgslyr ensscsisrt cdyteetkhg markcfdgrk
      301 vapskrdkqf ksvpgkpgst gnlhtrtgie ngysvwqrvq knsvekcnte lkktspvcsq
      361 fdvalkdapl qkrncnnass pttvpitddk rklknkvpkk lkrkvspspk qesgiysrke
      421 slpnkvnlna yaktsipngg isddlssmdd ngviknhsrs ssqpgyarvd tlksesvsdf
      481 evglcsmepc enacdatsgf niqdsiekns hvpsdqstlv eaetpvylph lmvngvaqte
      541 kssvaengkq shtlgsvlwk wipigikdcg ftssrsanss fehgnglgpd vedrtsmyns
      601 feekfapcsk nlspsmnvgr msssirnktk eenlsagand lnkiakalnd gykaqmasea
      661 vqmtsggpia eferllhfcs pvichsyssv rcqhclldkv psallcrhet pniplrclwt
      721 wyekhgsygl eikaedyenp krlgidqvef rayfvpflsa vqlfrntkty stprgseacd
      781 tdpndqsqvy dmksvdmelv feyfeseqph qrralyetiq qlvnddvstr ckmygdpvhl
      841 nsinmldlhp qswysvawyp iyripdgnfr aafltyhsls hfvcrsskfd yastvdaciv
      901 spvvglksyn aqgecwfqpr htttnimyen lglspsrilk ersrtleeta slmaravvik
      961 gnqtsvnrhp dyeffmsrqr
//
LOCUS       XP_040941336             980 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941336
VERSION     XP_040941336.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085402.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..980
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=108925
     Region          670..975
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..980
                     /gene="LOC107912947"
                     /coded_by="XM_041085402.1:147..3089"
                     /db_xref="GeneID:107912947"
ORIGIN      
        1 mnglhllssp sintfkldgh dtqkgpqpdh iphaampfrt rslpgsnvqq qfrnkplpnn
       61 ttqlsytsst hssndssavt skgsnatmfi dcpeedksak rnsqkngrkk gkhkkkhlcd
      121 vgsmesevca eytcgsstse icesssgvvt ssqsqnicrg didevetpes iapskahkfs
      181 gehhtdsyei gsedqqlsrc qgdierrhps hhkvfsdmhd slvldsisvg snseegmsgg
      241 hivnpfndyn heisqlevsg sstnkgslyr ensscsisrt cdyteetkhg markcfdgrk
      301 vapskrdkqf ksvpgkpgst gnlhtrtgie ngysvwqrvq knsvekcnte lkktspvcsq
      361 fdvalkdapl qkrncnnass pttvpitddk rklknkvpkk lkrkvspspk qesgiysrke
      421 slpnkvnlna yaktsipngg isddlssmdd ngviknhsrs ssqpgyarvd tlksesvsdf
      481 evglcsmepc enacdatsgf niqdsiekns hvpsdqstlv eaetpvylph lmvngvaqte
      541 kssvaengkq shtlgsvlwk wipigikdcg ftssrsanss fehgnglgpd vedrtsmyns
      601 feekfapcsk nlspsmnvgr msssirnktk eenlsagand lnkiakalnd gykaqmasea
      661 vqmtsggpia eferllhfcs pvichsyssv rcqhclldkv psallcrhet pniplrclwt
      721 wyekhgsygl eikaedyenp krlgidqvef rayfvpflsa vqlfrntkty stprgseacd
      781 tdpndqsqvy dmksvdmelv feyfeseqph qrralyetiq qlvnddvstr ckmygdpvhl
      841 nsinmldlhp qswysvawyp iyripdgnfr aafltyhsls hfvcrsskfd yastvdaciv
      901 spvvglksyn aqgecwfqpr htttnimyen lglspsrilk ersrtleeta slmaravvik
      961 gnqtsvnrhp dyeffmsrqr
//
LOCUS       XP_016694683             219 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase parA [Gossypium hirsutum].
ACCESSION   XP_016694683
VERSION     XP_016694683.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694683.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="probable glutathione S-transferase parA"
                     /calculated_mol_wt=25265
     Region          5..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(13,15,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(18,25,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          89..212
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(90,92,96,104)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(96,103,154..155,158,199)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(103,107..108,111..112,114..115,159,162,205,208,212)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..219
                     /gene="LOC107911340"
                     /coded_by="XM_016839194.2:53..712"
                     /db_xref="GeneID:107911340"
ORIGIN      
        1 medevvlldf wpssfamrvk ialgekgiky kckqedlfnk splllemnpi hkkipvlihn
       61 gkpiseslii lqyidqvwnh kspllpsdpy qrsqalfwad yidkkiygig rrvwmgkedq
      121 eeakeelmqc lktldrelgd klyfggqnig vvdvalvpft twfysyetcg nfsieagcpk
      181 lvawakrcke nyqsvsealp hplqiyeyvm elkkrlglv
//
LOCUS       XP_040941337             761 aa            linear   PLN 06-AUG-2024
DEFINITION  WRKY transcription factor SUSIBA2 [Gossypium hirsutum].
ACCESSION   XP_040941337
VERSION     XP_040941337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085403.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="WRKY transcription factor SUSIBA2"
                     /calculated_mol_wt=81760
     Region          272..327
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          490..547
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..761
                     /gene="LOC107912949"
                     /coded_by="XM_041085403.1:216..2501"
                     /db_xref="GeneID:107912949"
ORIGIN      
        1 mdhnitvftn rqesvtaddg ngesetvdhg cgggdgdggv dggksgvsia erraatcgfk
       61 vdkintarfr astsplaspp vrlpyltipp gisptallds pimlpnaqgs pttgtfpvpt
      121 lnqdgqvlsv sntdrgskia psfsfkpqsm dsqpsfssle dqvssslnlv qraevdyqpl
      181 vhlgtpldfe fpvefskeat srsfaadsva evkvlnnivn dnvnlgchps elagdrmsmq
      241 kvpfngqdvs tnlsesdpkg tnttagtart sedgynwrky gqkqvkgsey prsyykcthp
      301 ncqvkkkver sldgqiteii ykgahnhpkp qpcrpslgss sssnemsesa egngtcvkve
      361 sgliwkntqa gskdiklgsd lradglerts stsvitdlsd plstaqgksv gvfesadtpe
      421 fsstlasndd dnddratqgs islcddaand deseskrrkt escstemnva sgalreprvv
      481 vqiesevdil ddgyrwrkyg qkvvkgnpnp rsyykctspg cpvrkhvera shnlkcvltt
      541 ydgkhnhevp aarssshvns sacnlpptvp nsqaalalsr nshvlkpetp iqdiappfdr
      601 kpefkneymr psflgdfsne mklgtaslas vyqmkfpslq kaipygtfgl npncistrsp
      661 gsiastvpnf pismplnlpt sanlslagfd innggkpaap ihsflpgqqf kenaarfhgi
      721 kqelkddnhy dpclpivdha satssssssv yrqqatgnfp s
//
LOCUS       XP_016696839             761 aa            linear   PLN 06-AUG-2024
DEFINITION  WRKY transcription factor SUSIBA2 [Gossypium hirsutum].
ACCESSION   XP_016696839
VERSION     XP_016696839.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841350.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696839.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="WRKY transcription factor SUSIBA2"
                     /calculated_mol_wt=81760
     Region          272..327
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          490..547
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..761
                     /gene="LOC107912949"
                     /coded_by="XM_016841350.2:231..2516"
                     /db_xref="GeneID:107912949"
ORIGIN      
        1 mdhnitvftn rqesvtaddg ngesetvdhg cgggdgdggv dggksgvsia erraatcgfk
       61 vdkintarfr astsplaspp vrlpyltipp gisptallds pimlpnaqgs pttgtfpvpt
      121 lnqdgqvlsv sntdrgskia psfsfkpqsm dsqpsfssle dqvssslnlv qraevdyqpl
      181 vhlgtpldfe fpvefskeat srsfaadsva evkvlnnivn dnvnlgchps elagdrmsmq
      241 kvpfngqdvs tnlsesdpkg tnttagtart sedgynwrky gqkqvkgsey prsyykcthp
      301 ncqvkkkver sldgqiteii ykgahnhpkp qpcrpslgss sssnemsesa egngtcvkve
      361 sgliwkntqa gskdiklgsd lradglerts stsvitdlsd plstaqgksv gvfesadtpe
      421 fsstlasndd dnddratqgs islcddaand deseskrrkt escstemnva sgalreprvv
      481 vqiesevdil ddgyrwrkyg qkvvkgnpnp rsyykctspg cpvrkhvera shnlkcvltt
      541 ydgkhnhevp aarssshvns sacnlpptvp nsqaalalsr nshvlkpetp iqdiappfdr
      601 kpefkneymr psflgdfsne mklgtaslas vyqmkfpslq kaipygtfgl npncistrsp
      661 gsiastvpnf pismplnlpt sanlslagfd innggkpaap ihsflpgqqf kenaarfhgi
      721 kqelkddnhy dpclpivdha satssssssv yrqqatgnfp s
//
LOCUS       XP_040941338             761 aa            linear   PLN 06-AUG-2024
DEFINITION  WRKY transcription factor SUSIBA2 [Gossypium hirsutum].
ACCESSION   XP_040941338
VERSION     XP_040941338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085404.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="WRKY transcription factor SUSIBA2"
                     /calculated_mol_wt=81760
     Region          272..327
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          490..547
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..761
                     /gene="LOC107912949"
                     /coded_by="XM_041085404.1:216..2501"
                     /db_xref="GeneID:107912949"
ORIGIN      
        1 mdhnitvftn rqesvtaddg ngesetvdhg cgggdgdggv dggksgvsia erraatcgfk
       61 vdkintarfr astsplaspp vrlpyltipp gisptallds pimlpnaqgs pttgtfpvpt
      121 lnqdgqvlsv sntdrgskia psfsfkpqsm dsqpsfssle dqvssslnlv qraevdyqpl
      181 vhlgtpldfe fpvefskeat srsfaadsva evkvlnnivn dnvnlgchps elagdrmsmq
      241 kvpfngqdvs tnlsesdpkg tnttagtart sedgynwrky gqkqvkgsey prsyykcthp
      301 ncqvkkkver sldgqiteii ykgahnhpkp qpcrpslgss sssnemsesa egngtcvkve
      361 sgliwkntqa gskdiklgsd lradglerts stsvitdlsd plstaqgksv gvfesadtpe
      421 fsstlasndd dnddratqgs islcddaand deseskrrkt escstemnva sgalreprvv
      481 vqiesevdil ddgyrwrkyg qkvvkgnpnp rsyykctspg cpvrkhvera shnlkcvltt
      541 ydgkhnhevp aarssshvns sacnlpptvp nsqaalalsr nshvlkpetp iqdiappfdr
      601 kpefkneymr psflgdfsne mklgtaslas vyqmkfpslq kaipygtfgl npncistrsp
      661 gsiastvpnf pismplnlpt sanlslagfd innggkpaap ihsflpgqqf kenaarfhgi
      721 kqelkddnhy dpclpivdha satssssssv yrqqatgnfp s
//
LOCUS       XP_040941339             761 aa            linear   PLN 06-AUG-2024
DEFINITION  WRKY transcription factor SUSIBA2 [Gossypium hirsutum].
ACCESSION   XP_040941339
VERSION     XP_040941339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085405.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="WRKY transcription factor SUSIBA2"
                     /calculated_mol_wt=81760
     Region          272..327
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     Region          490..547
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..761
                     /gene="LOC107912949"
                     /coded_by="XM_041085405.1:216..2501"
                     /db_xref="GeneID:107912949"
ORIGIN      
        1 mdhnitvftn rqesvtaddg ngesetvdhg cgggdgdggv dggksgvsia erraatcgfk
       61 vdkintarfr astsplaspp vrlpyltipp gisptallds pimlpnaqgs pttgtfpvpt
      121 lnqdgqvlsv sntdrgskia psfsfkpqsm dsqpsfssle dqvssslnlv qraevdyqpl
      181 vhlgtpldfe fpvefskeat srsfaadsva evkvlnnivn dnvnlgchps elagdrmsmq
      241 kvpfngqdvs tnlsesdpkg tnttagtart sedgynwrky gqkqvkgsey prsyykcthp
      301 ncqvkkkver sldgqiteii ykgahnhpkp qpcrpslgss sssnemsesa egngtcvkve
      361 sgliwkntqa gskdiklgsd lradglerts stsvitdlsd plstaqgksv gvfesadtpe
      421 fsstlasndd dnddratqgs islcddaand deseskrrkt escstemnva sgalreprvv
      481 vqiesevdil ddgyrwrkyg qkvvkgnpnp rsyykctspg cpvrkhvera shnlkcvltt
      541 ydgkhnhevp aarssshvns sacnlpptvp nsqaalalsr nshvlkpetp iqdiappfdr
      601 kpefkneymr psflgdfsne mklgtaslas vyqmkfpslq kaipygtfgl npncistrsp
      661 gsiastvpnf pismplnlpt sanlslagfd innggkpaap ihsflpgqqf kenaarfhgi
      721 kqelkddnhy dpclpivdha satssssssv yrqqatgnfp s
//
LOCUS       XP_016696840             104 aa            linear   PLN 06-AUG-2024
DEFINITION  protein METHYLENE BLUE SENSITIVITY 1 [Gossypium hirsutum].
ACCESSION   XP_016696840
VERSION     XP_016696840.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841351.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..104
                     /product="protein METHYLENE BLUE SENSITIVITY 1"
                     /calculated_mol_wt=10936
     CDS             1..104
                     /gene="LOC107912950"
                     /coded_by="XM_016841351.2:262..576"
                     /db_xref="GeneID:107912950"
ORIGIN      
        1 mtgkakpkkh takeiaakid aattnrgggk agladrsgve kgghakfecp hckttapdlk
       61 tmqihhdakh pklpfeeskl vnlhsthgad sskprpgvrg slkk
//
LOCUS       XP_016696841             201 aa            linear   PLN 06-AUG-2024
DEFINITION  tyrosine-protein phosphatase DSP3 [Gossypium hirsutum].
ACCESSION   XP_016696841
VERSION     XP_016696841.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841352.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696841.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..201
                     /product="tyrosine-protein phosphatase DSP3"
                     /calculated_mol_wt=23134
     Region          17..161
                     /region_name="PFA-DSP_Siw14"
                     /note="atypical dual specificity phosphatases similar to
                     yeast Siw14; cd14528"
                     /db_xref="CDD:350377"
     CDS             1..201
                     /gene="LOC107912952"
                     /coded_by="XM_016841352.2:239..844"
                     /db_xref="GeneID:107912952"
ORIGIN      
        1 mgciieeddg dkvvmepppn fsmveegiyr sscprpcnfs fletlnlrsi iylcpepype
       61 enleyirshn irlfqfgieg ktepslatlk dairgalkil idvrnhpvli hckrgkhrtg
      121 slvgclrklq nwclssvfee yqhfagiksr dadmkfietf dvvclrqclh siiyqyqgyg
      181 skkrrllyse dnvqkprits i
//
LOCUS       XP_016696842             446 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein ZFN-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016696842
VERSION     XP_016696842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841353.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..446
                     /product="zinc finger CCCH domain-containing protein
                     ZFN-like isoform X1"
                     /calculated_mol_wt=48423
     Region          56..82
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          102..127
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          147..173
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          308..334
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          354..380
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     CDS             1..446
                     /gene="LOC107912953"
                     /coded_by="XM_016841353.2:419..1759"
                     /db_xref="GeneID:107912953"
ORIGIN      
        1 mgfsfdagip msrtataavp vtegsslsps lnqdamwqmn lrssetmess pyperpgepd
       61 csyyirtglc rfgatchfnh ppnrklaiaa armkgefper vgqpecqyyl ktgtckfgat
      121 ckfhhprdka giagrvslni lgyplrpnet ecayylrtgq ckfgstckfh hpqptnmmvs
      181 lrgspiyqtv pspatpgqqs hpggitnwsr asfipsprwq gpssyaslil pqgmvsvpgw
      241 naysgqlasv sssenlqqtn vnhqihgtsr qnesatagsq asfselrsgs vpvgvyalqr
      301 envfperpge pecqfymktg dckfgavckf hhprervlpa pdcvlspigl plrpgeplci
      361 fysrygickf gpsckfnhpm giftysysps spsdapvhcf lgsssgtagl nlsseglvea
      421 vptkprrlsl senrqlspsd didaeg
//
LOCUS       XP_016696843             406 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein ZFN-like isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016696843
VERSION     XP_016696843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="zinc finger CCCH domain-containing protein
                     ZFN-like isoform X2"
                     /calculated_mol_wt=43990
     Region          56..82
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          109..133
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          268..294
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          314..340
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     CDS             1..406
                     /gene="LOC107912953"
                     /coded_by="XM_016841354.2:419..1639"
                     /db_xref="GeneID:107912953"
ORIGIN      
        1 mgfsfdagip msrtataavp vtegsslsps lnqdamwqmn lrssetmess pyperpgepd
       61 csyyirtglc rfgatchfnh ppnrklaiaa armkgefper vgqpecqnet ecayylrtgq
      121 ckfgstckfh hpqptnmmvs lrgspiyqtv pspatpgqqs hpggitnwsr asfipsprwq
      181 gpssyaslil pqgmvsvpgw naysgqlasv sssenlqqtn vnhqihgtsr qnesatagsq
      241 asfselrsgs vpvgvyalqr envfperpge pecqfymktg dckfgavckf hhprervlpa
      301 pdcvlspigl plrpgeplci fysrygickf gpsckfnhpm giftysysps spsdapvhcf
      361 lgsssgtagl nlsseglvea vptkprrlsl senrqlspsd didaeg
//
LOCUS       XP_016696845             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696845
VERSION     XP_016696845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11991
     CDS             1..110
                     /gene="LOC107912954"
                     /coded_by="XM_016841356.2:555..887"
                     /db_xref="GeneID:107912954"
ORIGIN      
        1 mksgygvtlf llflffsafv fnyneatsma qvngpsemfp lveekmmlfn esrrklgsfq
       61 icavctccgg akgaclpspc cyaincnipn rpfgfcsftp ktcncfgchl
//
LOCUS       XP_016696846             424 aa            linear   PLN 06-AUG-2024
DEFINITION  CBS domain-containing protein CBSX6 [Gossypium hirsutum].
ACCESSION   XP_016696846
VERSION     XP_016696846.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696846.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..424
                     /product="CBS domain-containing protein CBSX6"
                     /calculated_mol_wt=45740
     Region          28..148
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cd02205"
                     /db_xref="CDD:341358"
     Site            order(43,68,73..74,77,108,129..131,145)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          108..148
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          <353..405
                     /region_name="COG2905"
                     /note="Signal-transduction protein containing
                     cAMP-binding, CBS, and nucleotidyltransferase domains
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:442149"
     CDS             1..424
                     /gene="LOC107912955"
                     /coded_by="XM_016841357.2:486..1760"
                     /db_xref="GeneID:107912955"
ORIGIN      
        1 masvllyhvv gdltvgkpel vefcdvetve sairaigest ecgipvwkrs shvgmienne
       61 mrqqrfvgil tsldiisfla ksqcledqdk amktqvsdvv vpnntllkiv dpgtrlidal
      121 emmkqgvrrl lvpkskvwkg mskrfsilyn gkwlknidnc sgnnlianan rpssssaaay
      181 mrdkfcclsr edmirfligc lgalaplpls sisslgavnl syssieaslp aveatqkhpg
      241 dptavavvei tqdgrhkilg eisasklwkc dylaaawala nlsagqfvmg aednvssrll
      301 pdfsvnstve dnkvvngggs ararkfssrs igfnpvspsf gmgktmyrgr sapltcktss
      361 slaavmaqml shranhvwvt eddnddvlvg mvgyadilva vtkqpaafip strsimelas
      421 eiqs
//
LOCUS       XP_040941340             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941340
VERSION     XP_040941340.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085406.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20298
     Region          73..160
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..176
                     /gene="LOC107912956"
                     /coded_by="XM_041085406.1:434..964"
                     /db_xref="GeneID:107912956"
ORIGIN      
        1 mgvdpsdlln yglyeepesd liiptltere ereearewsa krdeiaqaiw idymarnirm
       61 gkgnkkgtsk qfrwtkpmeh lfleilaeea qkgnkpsntf kavsfnhvav aiserfqvqc
      121 dakhvgnhlr tvknqwqiic airdesgfgw ddnmkmitcd ratydatmmv iyvyic
//
LOCUS       XP_016696847             594 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696847
VERSION     XP_016696847.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016696847.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..594
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67542
     Region          20..83
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          214..312
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          <245..>518
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     Region          472..497
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..594
                     /gene="LOC107912957"
                     /coded_by="XM_016841358.2:370..2154"
                     /db_xref="GeneID:107912957"
ORIGIN      
        1 madhalvvad tshtlveqsl vigqefpdve tcrrtlkdia ialhfdlriv ksdrsrfiak
       61 cskegcpwrv hvakcpgvpt fsirtlhgeh tcegvrnlhh qqasvgwvar svearirdnp
      121 qykpkeilqd irdqhgvavs ymqawrgker smaalhgtfe egyrllpayc eqirktnpgs
      181 vasvfatgqe ncfqrlfisy rasiygfita crplleldka dlkgkylgal lcaaavdadd
      241 alfplaiaiv dvesdenwmw fmselrkllg vntenmprlt ilserqrgmv davethfpsa
      301 fhgfclrhvs enfrdtfknt klvnifwnav yaltivefes kiaemvgisq dviqwfqlfp
      361 pqlwavayfe gvryghftlg vtemlynwal echelpivqm mehirhqltt wftnrremgm
      421 rwtsilvpsa ekriseaiad arcyqvlran evefeivste rtnivdirnr vcscrrwqly
      481 glpcahaaaa liscgqnahl faepcftvgs yletysqmih pipdksvwke lgegaeggaa
      541 klditvrppk irrppgrpkk kvlrvenlkr pkrvvqcgrc hllghsqkkc tmpi
//
LOCUS       XP_040941341             594 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941341
VERSION     XP_040941341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085407.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..594
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67542
     Region          20..83
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          214..312
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          <245..>518
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     Region          472..497
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..594
                     /gene="LOC107912957"
                     /coded_by="XM_041085407.1:1953..3737"
                     /db_xref="GeneID:107912957"
ORIGIN      
        1 madhalvvad tshtlveqsl vigqefpdve tcrrtlkdia ialhfdlriv ksdrsrfiak
       61 cskegcpwrv hvakcpgvpt fsirtlhgeh tcegvrnlhh qqasvgwvar svearirdnp
      121 qykpkeilqd irdqhgvavs ymqawrgker smaalhgtfe egyrllpayc eqirktnpgs
      181 vasvfatgqe ncfqrlfisy rasiygfita crplleldka dlkgkylgal lcaaavdadd
      241 alfplaiaiv dvesdenwmw fmselrkllg vntenmprlt ilserqrgmv davethfpsa
      301 fhgfclrhvs enfrdtfknt klvnifwnav yaltivefes kiaemvgisq dviqwfqlfp
      361 pqlwavayfe gvryghftlg vtemlynwal echelpivqm mehirhqltt wftnrremgm
      421 rwtsilvpsa ekriseaiad arcyqvlran evefeivste rtnivdirnr vcscrrwqly
      481 glpcahaaaa liscgqnahl faepcftvgs yletysqmih pipdksvwke lgegaeggaa
      541 klditvrppk irrppgrpkk kvlrvenlkr pkrvvqcgrc hllghsqkkc tmpi
//
LOCUS       XP_016696848             616 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LUTEIN DEFICIENT 5, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016696848
VERSION     XP_016696848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..616
                     /product="protein LUTEIN DEFICIENT 5, chloroplastic"
                     /calculated_mol_wt=68757
     Region          2..616
                     /region_name="PLN02738"
                     /note="carotene beta-ring hydroxylase"
                     /db_xref="CDD:215393"
     CDS             1..616
                     /gene="LOC107912958"
                     /coded_by="XM_016841359.2:109..1959"
                     /db_xref="GeneID:107912958"
ORIGIN      
        1 maatpafpll qlrltkpkpk ltascfrpyg tskfgivkcg sssngrepds adngvksver
       61 lleekrrael sariasgeft vqksgfpsll knglskigvp sgvleilfkg vddvedypki
      121 peakgaikai rseaffiply elyltyggif rltfgpksfl ivsdpsiakh ilkdnskays
      181 kgilaeildf vmgkglipad geiwrirrra ivpalhqkyv aamislfgla tdrlclkldd
      241 aatdgedvem eslfsrltld iigkavfnyd fdsltndtgi veavytvlre aedrsvspip
      301 tweipiwkdl sprqrkvmea lklindvldd liatckrmve eeelqfsdey mneqdpsilh
      361 fllasgddvs skqlrddlmt mliaghetsa alltwtfyll skepsvvskl qdevdfvlgd
      421 rfptiddmkk lkyttrvine slrlypqppv lirrsiendv lgkypikrge difisvwnlh
      481 rspslwqdae kfnperwpld gpnpnetnqn fcylpfgggp rkcvgdmfas fetvvavaml
      541 vrrfnfqmal gappvemttg atihttqglk mtvtrrmkpp iipeinmegl kmegtarile
      601 aetqlgekge vsqahs
//
LOCUS       XP_016694765             109 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694765
VERSION     XP_016694765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839276.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..109
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11936
     CDS             1..109
                     /gene="LOC107911456"
                     /coded_by="XM_016839276.2:68..397"
                     /db_xref="GeneID:107911456"
ORIGIN      
        1 mallnpvkkl invgkfggrv asavrrryiq asskqeaqac eraketvkqg vneakevnkk
       61 anskaqsawd saketaqkak dnmfgkades kevikqnaek ikqsmnkkd
//
LOCUS       XP_016696853             352 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-arabinopyranose mutase 5 [Gossypium hirsutum].
ACCESSION   XP_016696853
VERSION     XP_016696853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..352
                     /product="probable UDP-arabinopyranose mutase 5"
                     /calculated_mol_wt=39092
     Region          5..343
                     /region_name="RGP"
                     /note="Reversibly glycosylated polypeptide; pfam03214"
                     /db_xref="CDD:367397"
     CDS             1..352
                     /gene="LOC107912960"
                     /coded_by="XM_016841364.2:935..1993"
                     /db_xref="GeneID:107912960"
ORIGIN      
        1 mslsikdhei divigalrsd ltsfmsewrp ifsrfhliiv kdpdlkeelk ipegfnldvy
       61 kkpdidcvvg tststifsgy scryfgylvs rkkyiisvdd dcypakdnkg ilvdavaqhi
      121 tnlttpatpf ffntlydpft egadfvrgyp fslrsgvqca lscglwlnla dydaptqalk
      181 peernsryvd avltvparsl mpisginiaf nrevigpall pslrlggegk frwetmediw
      241 sgmcvkvacd hlglgvktgm pyvwrndrgd aiaslrkewe gvklmeevvp ffqsvrlpre
      301 atttedcvae vanvvkeqlg skdpifaraa kamvdwvmlw ksvgsstssp ga
//
LOCUS       XP_016696854             772 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g51745 [Gossypium hirsutum].
ACCESSION   XP_016696854
VERSION     XP_016696854.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..772
                     /product="uncharacterized protein At1g51745"
                     /calculated_mol_wt=86233
     Region          9..106
                     /region_name="PWWP"
                     /note="PWWP domain; pfam00855"
                     /db_xref="CDD:459964"
     CDS             1..772
                     /gene="LOC107912962"
                     /coded_by="XM_016841365.2:336..2654"
                     /db_xref="GeneID:107912962"
ORIGIN      
        1 mengaggggl ivwvrrrngs wwpgkilgpe elpashlasp rtgtpvkllg redasvdwyn
       61 lekskrvkaf rcgefddcie raesslgvpp kkrekyarre dailhalele kellrkqgkl
      121 drlsnersks tgsakkdscg sdisngkpgn tksiqsrnqd tsikgetlss pvllqkdqag
      181 nlpslendha eiiprtremq dmglkiacak qkltsfsald ddtlspstrv psmgrpahin
      241 geqrmegvlr akrskcmyfs pesfdvldyk eilrnqiems pshflecdsy pfhrlliedd
      301 ssefledies gssestsses esesdssete pdmdeditsh sgaticmdtr lgafqrldtl
      361 gagsmgqges desslsgems hfyphgphsv neavskwqlk gkrnlrnlgk rsmdaseirg
      421 yngyaprlhs eergmfrkrl vgqtycrnhd fdddvdvagl sakdfgvqmf gfdgtgslym
      481 prdssrsrds fdhnihdweg mrwenhaaer newenevwhf dpefsthrnf ggkrrsilid
      541 vdlnvqasyq kepvpivslm skldgkaiig hpiqiealdd nsietllsan gyfsnglmny
      601 gytslppawr takrtnfrvp rphrsfalgs yeggeyhsln herkppfkky nvvspnhsaa
      661 lvkksishvp vsptdrqlqr klpkkvslfs spktrtlssi giehtlisrp ihdsrncqme
      721 gsikpessgl ttvacipvkl vfsrllekin rppsktankv ilstsdavrd ps
//
LOCUS       XP_016696855             863 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696855
VERSION     XP_016696855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..863
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=95920
     Region          128..>570
                     /region_name="SpoT"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; COG0317"
                     /db_xref="CDD:440086"
     Region          808..861
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..863
                     /gene="LOC107912963"
                     /coded_by="XM_016841366.2:120..2711"
                     /db_xref="GeneID:107912963"
ORIGIN      
        1 mpfvtsssss scqsqihskt mflvhktspi flhkfypqta tkfrcipkkf tvsaslntia
       61 aaaasgsgat ihgavssait qvavtafaia sgaclstkvd flwpkveeqq gsftvegidv
      121 tgypifseak vqkaiafakr ahngqfrktg dpylshciht grilamlvps tglravdtvv
      181 agilhdvvdd tcerlfsiea efgddvarlv agvsrlsyin qllrrhrrin vnqstlshee
      241 annlrvmllg mvddprvvli kladrlhnmr tiyalplaka qavaqetllv wcslasrlgl
      301 walkaeledl cfavlqpqif rklradlasm wspsnkgtcp rrisvkgsws smqgndsvhe
      361 deapmhdedi tsikdlleav vpfdilldrr krlnflnnla kssemepkpk vvqdagiala
      421 slvvceeale relfisisyv pgmevtlssr lkslysiysk mkrkdvgink iydaralrvv
      481 vgdkngtlhg pavqccysll nivhrfwtpi dgefddyivn pkpsgyqslh tavqgpdasp
      541 levqirtqrm heyaehglaa hwlyketgnd lpsisvldes eieessylpe dlddqnsmdy
      601 esfqrysslk vghpvlrveg snllaaviik vdkegrellv avsfglaase avadrrssfq
      661 ikrweayarl ykkvsdewwc epghgdwctc lekytlcrdg iyhkqdqfer llptfvqvid
      721 ltaqeeseyw tvmsavfegk pvesielrpn ldyvasnsie asinrkvrll rtmlqweekl
      781 rsessfgrqd ggaksrnhad svvlgevvii cwphgdimrl rtgstaadaa rraglegklv
      841 lvngqlvlps telkdgdvve vrs
//
LOCUS       XP_040941342             816 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941342
VERSION     XP_040941342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085408.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..816
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=90858
     Region          128..>523
                     /region_name="SpoT"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; COG0317"
                     /db_xref="CDD:440086"
     Region          761..814
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..816
                     /gene="LOC107912963"
                     /coded_by="XM_041085408.1:88..2538"
                     /db_xref="GeneID:107912963"
ORIGIN      
        1 mpfvtsssss scqsqihskt mflvhktspi flhkfypqta tkfrcipkkf tvsaslntia
       61 aaaasgsgat ihgavssait qvavtafaia sgaclstkvd flwpkveeqq gsftvegidv
      121 tgypifseak vqkaiafakr ahngqfrktg dpylshciht grilamlvps tglrllrrhr
      181 rinvnqstls heeannlrvm llgmvddprv vlikladrlh nmrtiyalpl akaqavaqet
      241 llvwcslasr lglwalkael edlcfavlqp qifrklradl asmwspsnkg tcprrisvkg
      301 swssmqgnds vhedeapmhd editsikdll eavvpfdill drrkrlnfln nlakssemep
      361 kpkvvqdagi alaslvvcee alerelfisi syvpgmevtl ssrlkslysi yskmkrkdvg
      421 inkiydaral rvvvgdkngt lhgpavqccy sllnivhrfw tpidgefddy ivnpkpsgyq
      481 slhtavqgpd asplevqirt qrmheyaehg laahwlyket gndlpsisvl deseieessy
      541 lpedlddqns mdyesfqrys slkvghpvlr vegsnllaav iikvdkegre llvavsfgla
      601 aseavadrrs sfqikrweay arlykkvsde wwcepghgdw ctclekytlc rdgiyhkqdq
      661 ferllptfvq vidltaqees eywtvmsavf egkpvesiel rpnldyvasn sieasinrkv
      721 rllrtmlqwe eklrsessfg rqdggaksrn hadsvvlgev viicwphgdi mrlrtgstaa
      781 daarragleg klvlvngqlv lpstelkdgd vvevrs
//
LOCUS       XP_016696857             698 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016696857
VERSION     XP_016696857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016841368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..698
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=78324
     Region          11..>405
                     /region_name="SpoT"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; COG0317"
                     /db_xref="CDD:440086"
     Region          643..696
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..698
                     /gene="LOC107912963"
                     /coded_by="XM_016841368.2:171..2267"
                     /db_xref="GeneID:107912963"
ORIGIN      
        1 mlvpstglra vdtvvagilh dvvddtcerl fsieaefgdd varlvagvsr lsyinqllrr
       61 hrrinvnqst lsheeannlr vmllgmvddp rvvlikladr lhnmrtiyal plakaqavaq
      121 etllvwcsla srlglwalka eledlcfavl qpqifrklra dlasmwspsn kgtcprrisv
      181 kgswssmqgn dsvhedeapm hdeditsikd lleavvpfdi lldrrkrlnf lnnlakssem
      241 epkpkvvqda gialaslvvc eealerelfi sisyvpgmev tlssrlksly siyskmkrkd
      301 vginkiydar alrvvvgdkn gtlhgpavqc cysllnivhr fwtpidgefd dyivnpkpsg
      361 yqslhtavqg pdasplevqi rtqrmheyae hglaahwlyk etgndlpsis vldeseiees
      421 sylpedlddq nsmdyesfqr ysslkvghpv lrvegsnlla aviikvdkeg rellvavsfg
      481 laaseavadr rssfqikrwe ayarlykkvs dewwcepghg dwctclekyt lcrdgiyhkq
      541 dqferllptf vqvidltaqe eseywtvmsa vfegkpvesi elrpnldyva snsieasinr
      601 kvrllrtmlq weeklrsess fgrqdggaks rnhadsvvlg evviicwphg dimrlrtgst
      661 aadaarragl egklvlvngq lvlpstelkd gdvvevrs
//
LOCUS       XP_016694684             359 aa            linear   PLN 06-AUG-2024
DEFINITION  feruloyl CoA ortho-hydroxylase F6H1-3 [Gossypium hirsutum].
ACCESSION   XP_016694684
VERSION     XP_016694684.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694684.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..359
                     /product="feruloyl CoA ortho-hydroxylase F6H1-3"
                     /calculated_mol_wt=40013
     Region          26..355
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..359
                     /gene="LOC107911341"
                     /coded_by="XM_016839195.2:79..1158"
                     /db_xref="GeneID:107911341"
ORIGIN      
        1 maptladpfn dssalinfvi nqgngvkgls elglkalpkq yiqpleermc mnsivpqgsi
       61 piidmsnwed pnvaksicda asawgffqiv nhdvpvevle nvkdatynff rlpaevknky
      121 skehsssnnv rfgtsftpqa ekalewkdyl slfyvseeea salwppvcrq qvldymkkse
      181 lvikqllqvl mkglnvneid aakesllmgs mrtnlnyypk cpnpeltvgv grhsdvstlt
      241 illqdeiggl fvrgnkgddw ihvppikgsl vinvgdalqi msngryrsve hrvvangskn
      301 risvpifvnp rpadmigplp elatngekpi ykqvlysdyv khffrkahdg kktvefael
//
LOCUS       XP_040941343             359 aa            linear   PLN 06-AUG-2024
DEFINITION  feruloyl CoA ortho-hydroxylase F6H1-3 [Gossypium hirsutum].
ACCESSION   XP_040941343
VERSION     XP_040941343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085409.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..359
                     /product="feruloyl CoA ortho-hydroxylase F6H1-3"
                     /calculated_mol_wt=40100
     Region          26..355
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..359
                     /gene="LOC107912965"
                     /coded_by="XM_041085409.1:90..1169"
                     /db_xref="GeneID:107912965"
ORIGIN      
        1 maptladpfn dssalidfvi nqgngvkgls elglkalpkq yiqpleermc mtnivpqgsi
       61 piidmsnwed pkvaksicda asewgffqiv nhdvpievle nvkdatynff kmpaevknky
      121 skehsssnnv rfgtsftpqa ekalewkdyl slfyvseeea salwpsicre qvldymkkse
      181 vvikqllqvl mkglivneid eakesllvgs mrtnlnyypk cpnpeltvgv grhsdvstlt
      241 illqdeiggl fvrgnegddw ihvppikgsl vinvgdalqi msngryrsve hrvvangskn
      301 risvpifvnp rpadmigplp elvangekpi ykqvlysdyv khffhkahdg kktvefael
//
LOCUS       XP_040941344             360 aa            linear   PLN 06-AUG-2024
DEFINITION  feruloyl CoA ortho-hydroxylase F6H1-3 [Gossypium hirsutum].
ACCESSION   XP_040941344
VERSION     XP_040941344.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085410.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..360
                     /product="feruloyl CoA ortho-hydroxylase F6H1-3"
                     /calculated_mol_wt=40287
     Region          26..356
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..360
                     /gene="LOC107911342"
                     /coded_by="XM_041085410.1:65..1147"
                     /db_xref="GeneID:107911342"
ORIGIN      
        1 maptladpfn dssalidfvv nqgngvkgls elglkalpkq yiqpleermc mtnivpqgsi
       61 piidmskwed pkvaksicda asewgffqiv nhdvpievll envkdatynf fkmpvevknk
      121 yskehsssnn vrfgtsftpq aekalewkdy lslfyvseee asalwpsicr ekvldymkks
      181 evvikqllqv lmkglnvdei deakesllmg smrtnlnyyp kcpnpkltvg vgrhsdvstl
      241 iillqdeigg pfvrgnegdd wihvppikgs lvinvgdalq imsngryrsv ehhvvangsk
      301 nrisvpifvn arpidmigpl pelvangekp iykqvlysdy vkhffrkahd gkktvefael
//
LOCUS       XP_016676154             495 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 73C1 [Gossypium hirsutum].
ACCESSION   XP_016676154
VERSION     XP_016676154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820665.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..495
                     /product="UDP-glycosyltransferase 73C1"
                     /calculated_mol_wt=55700
     Region          1..488
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(22..23,25,184,201..202,206,233,292,369,371,373..374,
                     377)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(22,292,369,371,373..374)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            23
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..495
                     /gene="LOC107895353"
                     /coded_by="XM_016820665.2:1704..3191"
                     /db_xref="GeneID:107895353"
ORIGIN      
        1 matptqeeqq lhfvvfpfms qghmapmidi arllaqrgvi vtiittpqka arfkatldra
       61 mesglfirll evqfpcaefg lpegcesfdm lpsfslawnf yqatdaletp vkkllpeltp
      121 spncilsdvl faftldianq fqiprivfhg vccfrlvclh nlrisnvldh vsseteyfvv
      181 pnmphkveft kcqvtqvmae nlkqfseerk kadlesygvi insfeemepe yvkeykkare
      241 dkvwcigpvs lcnkdamdka qrgnkasvde qeflrwldsq kpgtviyacl gsisnltpsq
      301 liqlglglea snrpfiwvir asdasndvdt wisedgfeer tkgrglvirg wapqvlilsh
      361 qaiggflthc gwnstiegis agvplitwpl fadqfanekl avqiveigvr vgveepmrwg
      421 eeekigvlvk kedvkeaiek lmdegeegee rrkrakrlge mankaveigg sshlhisrli
      481 qdirqraner kqlst
//
LOCUS       XP_016676155             103 aa            linear   PLN 06-AUG-2024
DEFINITION  NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016676155
VERSION     XP_016676155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820666.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..103
                     /product="NADH dehydrogenase [ubiquinone] iron-sulfur
                     protein 6, mitochondrial"
                     /calculated_mol_wt=11414
     Region          60..97
                     /region_name="zf-CHCC"
                     /note="Zinc-finger domain; pfam10276"
                     /db_xref="CDD:463041"
     CDS             1..103
                     /gene="LOC107895354"
                     /coded_by="XM_016820666.2:144..455"
                     /db_xref="GeneID:107895354"
ORIGIN      
        1 maysgvlrtl irssylgstt rnfslvssqi snhtakwmqd sskkspmeli nevppikveg
       61 rivacegdnd palghpiefi cldlkepavc kycglryvqe hhh
//
LOCUS       XP_016676156             515 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016676156
VERSION     XP_016676156.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820667.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..515
                     /product="UPF0481 protein At3g47200 isoform X1"
                     /calculated_mol_wt=60033
     Region          83..485
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..515
                     /gene="LOC107895356"
                     /coded_by="XM_016820667.2:285..1832"
                     /db_xref="GeneID:107895356"
ORIGIN      
        1 mersssemtp shfdiekgcv efehglssfq ekmtsensdl atmstvlele veeekmtsen
       61 snldtmssvl eveeevieke syilkvprrl reinekayep nvisvgpyhy rkphlarmed
      121 fkkwlfekhv ekphlsldqf reamkdlegk trkcyerplp pdlkddanfv dmmvfdgcfv
      181 vtliladhrd fselgrhfyn dtwydlllle nqlpffvllk lysminpnpg lrghfnvlat
      241 saleffdkdp cslpinttss rhlldlvhtt fqtkeiqakv vkkvpccvpe ntsikhllrl
      301 vrtifhpset qaeeekssgk mpsateleda gihllgvpiq ekqkqeqwke cmfritfdng
      361 tkelkiptlq vddfterlfr nymayeqffp lnlptyfvdy vvfmddlint skdvellrks
      421 eiidnllgnd eavsemfnkl cdsitydeeg fyykdiashl ndhckrkrni wkanlkkdyf
      481 nspwslisll aalvllllai lqtifsllsy yhqrq
//
LOCUS       XP_040941346             515 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941346
VERSION     XP_040941346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085412.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..515
                     /product="UPF0481 protein At3g47200 isoform X1"
                     /calculated_mol_wt=60033
     Region          83..485
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..515
                     /gene="LOC107895356"
                     /coded_by="XM_041085412.1:468..2015"
                     /db_xref="GeneID:107895356"
ORIGIN      
        1 mersssemtp shfdiekgcv efehglssfq ekmtsensdl atmstvlele veeekmtsen
       61 snldtmssvl eveeevieke syilkvprrl reinekayep nvisvgpyhy rkphlarmed
      121 fkkwlfekhv ekphlsldqf reamkdlegk trkcyerplp pdlkddanfv dmmvfdgcfv
      181 vtliladhrd fselgrhfyn dtwydlllle nqlpffvllk lysminpnpg lrghfnvlat
      241 saleffdkdp cslpinttss rhlldlvhtt fqtkeiqakv vkkvpccvpe ntsikhllrl
      301 vrtifhpset qaeeekssgk mpsateleda gihllgvpiq ekqkqeqwke cmfritfdng
      361 tkelkiptlq vddfterlfr nymayeqffp lnlptyfvdy vvfmddlint skdvellrks
      421 eiidnllgnd eavsemfnkl cdsitydeeg fyykdiashl ndhckrkrni wkanlkkdyf
      481 nspwslisll aalvllllai lqtifsllsy yhqrq
//
LOCUS       XP_040941347             515 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941347
VERSION     XP_040941347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085413.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..515
                     /product="UPF0481 protein At3g47200 isoform X1"
                     /calculated_mol_wt=60033
     Region          83..485
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..515
                     /gene="LOC107895356"
                     /coded_by="XM_041085413.1:370..1917"
                     /db_xref="GeneID:107895356"
ORIGIN      
        1 mersssemtp shfdiekgcv efehglssfq ekmtsensdl atmstvlele veeekmtsen
       61 snldtmssvl eveeevieke syilkvprrl reinekayep nvisvgpyhy rkphlarmed
      121 fkkwlfekhv ekphlsldqf reamkdlegk trkcyerplp pdlkddanfv dmmvfdgcfv
      181 vtliladhrd fselgrhfyn dtwydlllle nqlpffvllk lysminpnpg lrghfnvlat
      241 saleffdkdp cslpinttss rhlldlvhtt fqtkeiqakv vkkvpccvpe ntsikhllrl
      301 vrtifhpset qaeeekssgk mpsateleda gihllgvpiq ekqkqeqwke cmfritfdng
      361 tkelkiptlq vddfterlfr nymayeqffp lnlptyfvdy vvfmddlint skdvellrks
      421 eiidnllgnd eavsemfnkl cdsitydeeg fyykdiashl ndhckrkrni wkanlkkdyf
      481 nspwslisll aalvllllai lqtifsllsy yhqrq
//
LOCUS       XP_040941348             515 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941348
VERSION     XP_040941348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085414.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..515
                     /product="UPF0481 protein At3g47200 isoform X1"
                     /calculated_mol_wt=60033
     Region          83..485
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..515
                     /gene="LOC107895356"
                     /coded_by="XM_041085414.1:514..2061"
                     /db_xref="GeneID:107895356"
ORIGIN      
        1 mersssemtp shfdiekgcv efehglssfq ekmtsensdl atmstvlele veeekmtsen
       61 snldtmssvl eveeevieke syilkvprrl reinekayep nvisvgpyhy rkphlarmed
      121 fkkwlfekhv ekphlsldqf reamkdlegk trkcyerplp pdlkddanfv dmmvfdgcfv
      181 vtliladhrd fselgrhfyn dtwydlllle nqlpffvllk lysminpnpg lrghfnvlat
      241 saleffdkdp cslpinttss rhlldlvhtt fqtkeiqakv vkkvpccvpe ntsikhllrl
      301 vrtifhpset qaeeekssgk mpsateleda gihllgvpiq ekqkqeqwke cmfritfdng
      361 tkelkiptlq vddfterlfr nymayeqffp lnlptyfvdy vvfmddlint skdvellrks
      421 eiidnllgnd eavsemfnkl cdsitydeeg fyykdiashl ndhckrkrni wkanlkkdyf
      481 nspwslisll aalvllllai lqtifsllsy yhqrq
//
LOCUS       XP_040941349             511 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941349
VERSION     XP_040941349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085415.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..511
                     /product="UPF0481 protein At3g47200 isoform X2"
                     /calculated_mol_wt=59563
     Region          79..481
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..511
                     /gene="LOC107895356"
                     /coded_by="XM_041085415.1:1433..2968"
                     /db_xref="GeneID:107895356"
ORIGIN      
        1 mersssemtp shfdiekgcv efehglssfq ekmtsensdl atmstvlele veeekmtsen
       61 snldtmssvl eveeeesyil kvprrlrein ekayepnvis vgpyhyrkph larmedfkkw
      121 lfekhvekph lsldqfream kdlegktrkc yerplppdlk ddanfvdmmv fdgcfvvtli
      181 ladhrdfsel grhfyndtwy dllllenqlp ffvllklysm inpnpglrgh fnvlatsale
      241 ffdkdpcslp inttssrhll dlvhttfqtk eiqakvvkkv pccvpentsi khllrlvrti
      301 fhpsetqaee ekssgkmpsa teledagihl lgvpiqekqk qeqwkecmfr itfdngtkel
      361 kiptlqvddf terlfrnyma yeqffplnlp tyfvdyvvfm ddlintskdv ellrkseiid
      421 nllgndeavs emfnklcdsi tydeegfyyk diashlndhc krkrniwkan lkkdyfnspw
      481 slisllaalv llllailqti fsllsyyhqr q
//
LOCUS       XP_040941350             490 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941350
VERSION     XP_040941350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085416.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..490
                     /product="UPF0481 protein At3g47200 isoform X3"
                     /calculated_mol_wt=57209
     Region          58..460
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..490
                     /gene="LOC107895356"
                     /coded_by="XM_041085416.1:469..1941"
                     /db_xref="GeneID:107895356"
ORIGIN      
        1 mersssemtp shfdiekgcv efehglssfq ekmtsensdl atmstvlele veeeesyilk
       61 vprrlreine kayepnvisv gpyhyrkphl armedfkkwl fekhvekphl sldqfreamk
      121 dlegktrkcy erplppdlkd danfvdmmvf dgcfvvtlil adhrdfselg rhfyndtwyd
      181 llllenqlpf fvllklysmi npnpglrghf nvlatsalef fdkdpcslpi nttssrhlld
      241 lvhttfqtke iqakvvkkvp ccvpentsik hllrlvrtif hpsetqaeee kssgkmpsat
      301 eledagihll gvpiqekqkq eqwkecmfri tfdngtkelk iptlqvddft erlfrnymay
      361 eqffplnlpt yfvdyvvfmd dlintskdve llrkseiidn llgndeavse mfnklcdsit
      421 ydeegfyykd iashlndhck rkrniwkanl kkdyfnspws lisllaalvl lllailqtif
      481 sllsyyhqrq
//
LOCUS       XP_016668039             440 aa            linear   PLN 06-AUG-2024
DEFINITION  putative UPF0481 protein At3g02645 [Gossypium hirsutum].
ACCESSION   XP_016668039
VERSION     XP_016668039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016812550.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..440
                     /product="putative UPF0481 protein At3g02645"
                     /calculated_mol_wt=51432
     Region          32..410
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..440
                     /gene="LOC107888443"
                     /coded_by="XM_016812550.2:134..1456"
                     /db_xref="GeneID:107888443"
ORIGIN      
        1 mgssspertt whciieiehg hsssqeispt iifkvprrlr evnerayepn visvgpyhyr
       61 kphlarmedi kkrwfeeivd ethlgldqfr kemkhlerkt rkcyeqplpp dledeekfvd
      121 mmvydgcfvv qlirkghlcd fwklglhvsr dirgdlllle nqlpffvllk lygmiepnpg
      181 prrhfcklvt salvffdrdp pnvhrntasi rhllglvhst fyhsllptqa eiarreenfq
      241 ippytmpsat eledagihfs gvpiqnmqnq nqgtgnmfdi tfdnstkelk ipilavgdst
      301 ertfgnymay eqlfawevpn ffvdyvvfmd klintskdve llrkneiivn llgnneavtq
      361 mfnklahsvy yspecfyyrd iasqvnehck rkrniwkakl kkdyfntpws pilflaalvl
      421 llltilqtif svlsyyhqkq
//
LOCUS       XP_040941351             131 aa            linear   PLN 06-AUG-2024
DEFINITION  ATPase family AAA domain-containing protein 3A homolog [Gossypium
            hirsutum].
ACCESSION   XP_040941351
VERSION     XP_040941351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085417.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..131
                     /product="ATPase family AAA domain-containing protein 3A
                     homolog"
                     /calculated_mol_wt=15344
     Region          56..>131
                     /region_name="ATAD3_N"
                     /note="ATPase family AAA domain-containing protein 3,
                     N-terminal; pfam12037"
                     /db_xref="CDD:463442"
     CDS             1..131
                     /gene="LOC121212512"
                     /coded_by="XM_041085417.1:2195..2590"
                     /db_xref="GeneID:121212512"
ORIGIN      
        1 mlfcrnprwg taqyalaivh rcssscgrri wpkillekgm kfstnltfhs lmkllkafel
       61 mkkqeetrqa evaaraaefk amqaqaeter qrviydeqkk ltqhqaqtks qmaryedela
      121 rkrmqaeney q
//
LOCUS       XP_016705180             400 aa            linear   PLN 06-AUG-2024
DEFINITION  TOM1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016705180
VERSION     XP_016705180.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849691.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016705180.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..400
                     /product="TOM1-like protein 1"
                     /calculated_mol_wt=44343
     Region          49..177
                     /region_name="VHS"
                     /note="VHS (Vps27/Hrs/STAM) domain family; cd03561"
                     /db_xref="CDD:340765"
     Site            order(65..66,69,73,113..114)
                     /site_type="other"
                     /note="putative intraprotein/interprotein binding site
                     [polypeptide binding]"
                     /db_xref="CDD:340765"
     Region          237..313
                     /region_name="GAT_SF"
                     /note="GAT domain found in eukaryotic GGAs, metazoan
                     Tom1-like proteins, metazoan STAMs, fungal Vps27, and
                     similar proteins; cl03906"
                     /db_xref="CDD:470905"
     CDS             1..400
                     /gene="LOC107920152"
                     /coded_by="XM_016849691.2:264..1466"
                     /db_xref="GeneID:107920152"
ORIGIN      
        1 mekelmdkvs afgerikveg aelgrkmsag mssmsfmvke lfqgpnptdk lledatseal
       61 depdwalnld icdmvnhekv nsvelirgik rrimlksprv qylsmvllet fvkncekafs
      121 evaaegvlge mvkliddpqt vvnnrnkali lieawgests elrylpvfee tykslksrgi
      181 rfpgrdnesl apiftparsv saaevdasla qqlqrdvqlq hdttvpsfsa eqtkeafdva
      241 rnciellstv lssspqqdal eddltttlvq qccqsqstvl riietagdne allfealnvn
      301 deiqkalsky eelkkpsvvr hepepamipv avepgdsprh tnedafirkt strhgthggs
      361 nddmmddlde mifgkkgggs sergqdlkkq qaskddlitf
//
LOCUS       XP_040941352             400 aa            linear   PLN 06-AUG-2024
DEFINITION  TOM1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941352
VERSION     XP_040941352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085418.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..400
                     /product="TOM1-like protein 1"
                     /calculated_mol_wt=44343
     Region          49..177
                     /region_name="VHS"
                     /note="VHS (Vps27/Hrs/STAM) domain family; cd03561"
                     /db_xref="CDD:340765"
     Site            order(65..66,69,73,113..114)
                     /site_type="other"
                     /note="putative intraprotein/interprotein binding site
                     [polypeptide binding]"
                     /db_xref="CDD:340765"
     Region          237..313
                     /region_name="GAT_SF"
                     /note="GAT domain found in eukaryotic GGAs, metazoan
                     Tom1-like proteins, metazoan STAMs, fungal Vps27, and
                     similar proteins; cl03906"
                     /db_xref="CDD:470905"
     CDS             1..400
                     /gene="LOC107920152"
                     /coded_by="XM_041085418.1:216..1418"
                     /db_xref="GeneID:107920152"
ORIGIN      
        1 mekelmdkvs afgerikveg aelgrkmsag mssmsfmvke lfqgpnptdk lledatseal
       61 depdwalnld icdmvnhekv nsvelirgik rrimlksprv qylsmvllet fvkncekafs
      121 evaaegvlge mvkliddpqt vvnnrnkali lieawgests elrylpvfee tykslksrgi
      181 rfpgrdnesl apiftparsv saaevdasla qqlqrdvqlq hdttvpsfsa eqtkeafdva
      241 rnciellstv lssspqqdal eddltttlvq qccqsqstvl riietagdne allfealnvn
      301 deiqkalsky eelkkpsvvr hepepamipv avepgdsprh tnedafirkt strhgthggs
      361 nddmmddlde mifgkkgggs sergqdlkkq qaskddlitf
//
LOCUS       XP_040941353             294 aa            linear   PLN 06-AUG-2024
DEFINITION  binding partner of ACD11 1 [Gossypium hirsutum].
ACCESSION   XP_040941353
VERSION     XP_040941353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085419.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..294
                     /product="binding partner of ACD11 1"
                     /calculated_mol_wt=31297
     Region          1..259
                     /region_name="PLN03120"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215588"
     CDS             1..294
                     /gene="LOC121212513"
                     /coded_by="XM_041085419.1:136..1020"
                     /db_xref="GeneID:121212513"
ORIGIN      
        1 mairsvkvsn vslgaseqdi keffifsgel vyvemqgdne rsqvayitfk epqgaetavl
       61 lsgativdqs vtielapdyk lpdhvfttpg tgdkssgqae sgykkaedvv stmlakgfii
      121 gkdalgkaka fdekhqftst asakiasldq kigftekfsa gtaivnekmr dvdqkfqvse
      181 ktksafavae qsvstagsai mknryvlvga swvsaaynrv akaaedvgqk arekvlaeeq
      241 aqkpeghahv nesnspkdsk paktsgqpsn psseqalils eqpsnpsadr glli
//
LOCUS       XP_016703715             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703715
VERSION     XP_016703715.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703715.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..171
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18786
     CDS             1..171
                     /gene="LOC107918634"
                     /coded_by="XM_016848226.2:393..908"
                     /db_xref="GeneID:107918634"
ORIGIN      
        1 mgknnpslda yslqpsadsk nvytlvtntk sreshrlpvp ddcilsmlai fidesmrdgt
       61 epedahsvly fkasdlldgy ghghgvsldd qsdeitsrlv psidhsdvas pttlmeipqp
      121 shdesilaml diftedstmm ivgkkredgp llvsladekd ddiffllqnf i
//
LOCUS       XP_016703716             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703716
VERSION     XP_016703716.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703716.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..171
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18582
     CDS             1..171
                     /gene="LOC107918635"
                     /coded_by="XM_016848227.2:383..898"
                     /db_xref="GeneID:107918635"
ORIGIN      
        1 mgknkpslda cslqpsadsn nvytlvtntk sreshrlpvp ddsilsmlai fidestrdgp
       61 epedahsvly fkasdlldgh ghghgvsldd qsdeitsrla tsidhsdvas pttlkeipql
      121 shddsilsml diftedstmm ivgekredgp llvslgdekd deifsllqnf i
//
LOCUS       XP_040941354             432 aa            linear   PLN 06-AUG-2024
DEFINITION  heat stress transcription factor A-1b isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941354
VERSION     XP_040941354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085420.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..432
                     /product="heat stress transcription factor A-1b isoform
                     X1"
                     /calculated_mol_wt=47632
     Region          24..114
                     /region_name="HSF"
                     /note="heat shock factor; smart00415"
                     /db_xref="CDD:214654"
     CDS             1..432
                     /gene="LOC121212514"
                     /coded_by="XM_041085420.1:363..1661"
                     /db_xref="GeneID:121212514"
ORIGIN      
        1 metlhgsvps acadtaangn tvtpflskty dvvddpstds vvswssdnns fvvwkvpefa
       61 rdllpmyfkh nnfssfvrql ntygfkkvdp drwefanvgf lrgqkhalka isrrkpanvh
      121 cnqqqnssig acvdvgkfgl qeeveglkrd knvlmqelvr lrqqqqatdn qlqaygqsvq
      181 mmeqrqqqmm sflakvmqtp gflnqllqqq nesnrqltga nkkrrlhrqd eenltgenga
      241 vspngqtvkf qplhnehqmm evntsprreh gappssalhs ssssseisev tlpevspasw
      301 rsylqaesgv pdsslstaaa qlttetsvhk sqkdaifrsv pqmlgfvpdn tvgpesrnae
      361 yldpmsvvsn atmpveades cagqdmeiml dgspklpain dtfwehfltg spltgdtdei
      421 nssslengay gg
//
LOCUS       XP_040941356             399 aa            linear   PLN 06-AUG-2024
DEFINITION  heat stress transcription factor A-1b isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941356
VERSION     XP_040941356.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085422.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="heat stress transcription factor A-1b isoform
                     X2"
                     /calculated_mol_wt=44091
     Region          24..104
                     /region_name="HSF"
                     /note="heat shock factor; smart00415"
                     /db_xref="CDD:214654"
     CDS             1..399
                     /gene="LOC121212514"
                     /coded_by="XM_041085422.1:366..1565"
                     /db_xref="GeneID:121212514"
ORIGIN      
        1 metlhgsvps acadtaangn tvtpflskty dvvddpstds vvswssdnns fvvwkvpefa
       61 rdllpmyfkh nnfssfvrql ntygfkkvdp drwefanvgf lrgkfglqee veglkrdknv
      121 lmqelvrlrq qqqatdnqlq aygqsvqmme qrqqqmmsfl akvmqtpgfl nqllqqqnes
      181 nrqltgankk rrlhrqdeen ltgengavsp ngqtvkfqpl hnehqmmevn tsprrehgap
      241 pssalhssss sseisevtlp evspaswrsy lqaesgvpds slstaaaqlt tetsvhksqk
      301 daifrsvpqm lgfvpdntvg pesrnaeyld pmsvvsnatm pveadescag qdmeimldgs
      361 pklpaindtf wehfltgspl tgdtdeinss slengaygg
//
LOCUS       XP_040941357             888 aa            linear   PLN 06-AUG-2024
DEFINITION  transducin beta-like protein 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941357
VERSION     XP_040941357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085423.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..888
                     /product="transducin beta-like protein 3 isoform X1"
                     /calculated_mol_wt=98106
     Region          64..100
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          67..611
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          105..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          148..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          238..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          402..441
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          446..493
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          500..535
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          541..577
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          583..619
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          611..650
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          625..649
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          672..802
                     /region_name="Utp13"
                     /note="Utp13 specific WD40 associated domain; pfam08625"
                     /db_xref="CDD:462540"
     CDS             1..888
                     /gene="LOC121212515"
                     /coded_by="XM_041085423.1:202..2868"
                     /db_xref="GeneID:121212515"
ORIGIN      
        1 masatlkkny rcsqslqqfy sggpfvvssd gsfiacscge sikivdssna stkftieaes
       61 stitalalsp ndkllfsagh srqikvwdld tfkclrswkg hdgpvmgmac hgsggllats
      121 gadrkvlvwd vdggfcthyf kghkgvvtsi mfhpdvnksl lfsgsddttv rvwdllakkc
      181 vavlekhfsa vssmavsedg wtlltagrdk vvnlwdlldy rckstiptye vleavcvvys
      241 gsrfasslga flqqsgkkks rstgiyfiaa gergivriwt segavflyeq kssdvtissa
      301 ededstrgfi savmlpldqg llcvtadqqf lfyspaehle ekwslkltkr lvgfndeivd
      361 mkfldeeeqy lavatnleqv rvydlssmsc syvlaghtdt ilcldtsiss ngrrliltgs
      421 kdnsvrlwes errcciglgi ghmgavgava fskkcrdffv sgssdrtikv wnfhglsddi
      481 eepislkaka vvaahdkdin slavapndsl vcsgsqdrta ciwrlpelvl vvkftghkrg
      541 iwcvefspvd qcvitasgdk tvkiwaiadg sclktfeght ssvlrasflt rgtqfvscga
      601 dglvklwtik tneciatydq hedkvwalav gkktemlatg gsdavinlwh dstaaekeea
      661 frkeeegvlr gqelenalld aeytkaiqia lelrrphklf elfselcrkr eagyhidkal
      721 halgkgefll lfeyirewnt kpklcnvaqs vlfrafnill pteiieiksi selleglipy
      781 sqrhfsridr lirstflldy tllrmsviep atqddlktks llhsekneed alltdnaeed
      841 qkqvseeqkp kasgkkrksh ksgdhsrshk kvkdssthan taavpsqa
//
LOCUS       XP_040941358             843 aa            linear   PLN 06-AUG-2024
DEFINITION  transducin beta-like protein 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941358
VERSION     XP_040941358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085424.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..843
                     /product="transducin beta-like protein 3 isoform X2"
                     /calculated_mol_wt=93274
     Region          44..566
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..100
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          105..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          148..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          238..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          359..396
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          401..448
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          455..490
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          496..532
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          538..574
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          566..605
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          580..604
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          627..757
                     /region_name="Utp13"
                     /note="Utp13 specific WD40 associated domain; pfam08625"
                     /db_xref="CDD:462540"
     CDS             1..843
                     /gene="LOC121212515"
                     /coded_by="XM_041085424.1:170..2701"
                     /db_xref="GeneID:121212515"
ORIGIN      
        1 masatlkkny rcsqslqqfy sggpfvvssd gsfiacscge sikivdssna stkftieaes
       61 stitalalsp ndkllfsagh srqikvwdld tfkclrswkg hdgpvmgmac hgsggllats
      121 gadrkvlvwd vdggfcthyf kghkgvvtsi mfhpdvnksl lfsgsddttv rvwdllakkc
      181 vavlekhfsa vssmavsedg wtlltagrdk vvnlwdlldy rckstiptye vleavcvvys
      241 gsrfasslga flqqsgkkks rstgiyfiaa gergivriwt segavflyeq kssdvtissa
      301 ededstrgfi savmlpldqg llcvtadqqf lfyspaehle ekwslkltkr lvgfndeivd
      361 mkfldeeeqy lavatnleqv rlweserrcc iglgighmga vgavafskkc rdffvsgssd
      421 rtikvwnfhg lsddieepis lkakavvaah dkdinslava pndslvcsgs qdrtaciwrl
      481 pelvlvvkft ghkrgiwcve fspvdqcvit asgdktvkiw aiadgsclkt feghtssvlr
      541 asfltrgtqf vscgadglvk lwtiktneci atydqhedkv walavgkkte mlatggsdav
      601 inlwhdstaa ekeeafrkee egvlrgqele nalldaeytk aiqialelrr phklfelfse
      661 lcrkreagyh idkalhalgk geflllfeyi rewntkpklc nvaqsvlfra fnillpteii
      721 eiksiselle glipysqrhf sridrlirst flldytllrm sviepatqdd lktksllhse
      781 kneedalltd naeedqkqvs eeqkpkasgk krkshksgdh srshkkvkds sthantaavp
      841 sqa
//
LOCUS       XP_016703623             283 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703623
VERSION     XP_016703623.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848134.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703623.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..283
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30858
     Region          109..248
                     /region_name="UPF0114"
                     /note="Uncharacterized protein family, UPF0114; pfam03350"
                     /db_xref="CDD:460892"
     CDS             1..283
                     /gene="LOC107918555"
                     /coded_by="XM_016848134.2:114..965"
                     /db_xref="GeneID:107918555"
ORIGIN      
        1 malssasvft hplaistltr rplgvslhyh rlhhhrsptf atlsssssqp psstavtppl
       61 ptsagentls sqthqhpnpg sfnyalanpk gdsllgiars tesniekiif dfrflalfav
      121 ggslagsllc flngcvyife aykvywtscv kgihtgnmvl rlveaidvyl agtvmlifgm
      181 glyglfisnl npelpadvdr alkgsslfgm famkerpkwm kissldelkt kvghvivmil
      241 lvkmferskm vaintgmdll syaiciflss aslyilhhlh kpe
//
LOCUS       XP_040941359            1051 aa            linear   PLN 06-AUG-2024
DEFINITION  structural maintenance of chromosomes protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941359
VERSION     XP_040941359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085425.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1051
                     /product="structural maintenance of chromosomes protein 5
                     isoform X1"
                     /calculated_mol_wt=120776
     Region          21..>178
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          23..902
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Site            50..57
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213244"
     Site            149..152
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213244"
     Region          <926..1028
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            942..951
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213244"
     Site            966..971
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213244"
     Site            974..977
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213244"
     Site            1001..1007
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213244"
     CDS             1..1051
                     /gene="LOC121212517"
                     /coded_by="XM_041085425.1:298..3453"
                     /db_xref="GeneID:121212517"
ORIGIN      
        1 meeprvkrpk isrdeddylp gniteielhn fmtfnhlvck pgprlnlvig pngsgksslv
       61 caialclgge pqllgratsi gayvkrgeds gyikislrgy tkeeqitivr kidtrnksew
      121 cyngksvakk evlevikkfn iqvnnltqfl pqdrvcefak ltpiqlleet ekavgdpqlp
      181 vqhfalveks relkkykkav dkmgdslkql ialnaeqekd vervrqrdel lekvdcmkkk
      241 lpwlkydmkk ieyleaqkre keakkklnea akmlnefkap iekqkqektk lddqckrisn
      301 fmnenikkrn drlqkeneaa vqarskykei edlrreeacr kqsiieakmk ladaerdlqn
      361 lpayeppkee ierlksqile ltssahqmmq qkkekekslg lmkttlrncv dglkdmentk
      421 tkllhalkks gaekifeayq wlelhrkeln kdvygpvlle vnvsnevhak fleghvahyi
      481 wksfitqdsg drdflvnnlq pfdvpilnyv reesgqkaps eiskqmhdlg iysrldqvfd
      541 apaavkdvmt sqfglehsyi gsdktdrkad diakklgild fwtpqnhyhw svsrygdnem
      601 sarvepvhds rlllygldsg eienmrsrkn elekliadae egikslqiqq rlvedeaakl
      661 qkqreemvet arremrkrkd lescveqrkr klvslersgd ietavdklie qaarsnierl
      721 khaikvkdll veavsckwsy aekhmasiey dakiidsevn lkeqekfayq asvnlqncqq
      781 dvkdysqqll aakrnaesia iitpelerlf lqmpttieel eaaiqdnisq ansivflnqn
      841 ilqeyedrrr qietisakle sdgkelqrcl aeihalkgsw lpklrnlvsq inetfsrnfq
      901 emavagevsl dehdtdfdqf gilvkvkfrq agqlqvlsah hqsggersvs tilylvslqd
      961 lancpfrvvd einqgmdpin erkmfqqlvq aasqpntpqc flltpkllpd leyseacsil
     1021 nimngpwiee pskvwrngdc wstiaglaet r
//
LOCUS       XP_040941360             984 aa            linear   PLN 06-AUG-2024
DEFINITION  structural maintenance of chromosomes protein 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941360
VERSION     XP_040941360.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085426.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..984
                     /product="structural maintenance of chromosomes protein 5
                     isoform X2"
                     /calculated_mol_wt=113585
     Region          21..>178
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          23..>868
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Site            50..57
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213244"
     Site            149..152
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213244"
     Region          <926..>945
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..984
                     /gene="LOC121212517"
                     /coded_by="XM_041085426.1:298..3252"
                     /db_xref="GeneID:121212517"
ORIGIN      
        1 meeprvkrpk isrdeddylp gniteielhn fmtfnhlvck pgprlnlvig pngsgksslv
       61 caialclgge pqllgratsi gayvkrgeds gyikislrgy tkeeqitivr kidtrnksew
      121 cyngksvakk evlevikkfn iqvnnltqfl pqdrvcefak ltpiqlleet ekavgdpqlp
      181 vqhfalveks relkkykkav dkmgdslkql ialnaeqekd vervrqrdel lekvdcmkkk
      241 lpwlkydmkk ieyleaqkre keakkklnea akmlnefkap iekqkqektk lddqckrisn
      301 fmnenikkrn drlqkeneaa vqarskykei edlrreeacr kqsiieakmk ladaerdlqn
      361 lpayeppkee ierlksqile ltssahqmmq qkkekekslg lmkttlrncv dglkdmentk
      421 tkllhalkks gaekifeayq wlelhrkeln kdvygpvlle vnvsnevhak fleghvahyi
      481 wksfitqdsg drdflvnnlq pfdvpilnyv reesgqkaps eiskqmhdlg iysrldqvfd
      541 apaavkdvmt sqfglehsyi gsdktdrkad diakklgild fwtpqnhyhw svsrygdnem
      601 sarvepvhds rlllygldsg eienmrsrkn elekliadae egikslqiqq rlvedeaakl
      661 qkqreemvet arremrkrkd lescveqrkr klvslersgd ietavdklie qaarsnierl
      721 khaikvkdll veavsckwsy aekhmasiey dakiidsevn lkeqekfayq asvnlqncqq
      781 dvkdysqqll aakrnaesia iitpelerlf lqmpttieel eaaiqdnisq ansivflnqn
      841 ilqeyedrrr qietisakle sdgkelqrcl aeihalkgsw lpklrnlvsq inetfsrnfq
      901 emavagevsl dehdtdfdqf gilvkvkfrq agqlqvlsah hqsggfqlff ilflfkisli
      961 vplgwlmrlt kewtplmker cfsn
//
LOCUS       XP_040941361             849 aa            linear   PLN 06-AUG-2024
DEFINITION  structural maintenance of chromosomes protein 5 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941361
VERSION     XP_040941361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085427.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..849
                     /product="structural maintenance of chromosomes protein 5
                     isoform X3"
                     /calculated_mol_wt=97967
     Region          <3..701
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <724..826
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            740..749
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            764..769
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            772..775
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            799..805
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
     CDS             1..849
                     /gene="LOC121212517"
                     /coded_by="XM_041085427.1:147..2696"
                     /db_xref="GeneID:121212517"
ORIGIN      
        1 mgdslkqlia lnaeqekdve rvrqrdelle kvdcmkkklp wlkydmkkie yleaqkreke
       61 akkklneaak mlnefkapie kqkqektkld dqckrisnfm nenikkrndr lqkeneaavq
      121 arskykeied lrreeacrkq siieakmkla daerdlqnlp ayeppkeeie rlksqilelt
      181 ssahqmmqqk kekekslglm kttlrncvdg lkdmentktk llhalkksga ekifeayqwl
      241 elhrkelnkd vygpvllevn vsnevhakfl eghvahyiwk sfitqdsgdr dflvnnlqpf
      301 dvpilnyvre esgqkapsei skqmhdlgiy srldqvfdap aavkdvmtsq fglehsyigs
      361 dktdrkaddi akklgildfw tpqnhyhwsv srygdnemsa rvepvhdsrl llygldsgei
      421 enmrsrknel ekliadaeeg ikslqiqqrl vedeaaklqk qreemvetar remrkrkdle
      481 scveqrkrkl vslersgdie tavdklieqa arsnierlkh aikvkdllve avsckwsyae
      541 khmasieyda kiidsevnlk eqekfayqas vnlqncqqdv kdysqqllaa krnaesiaii
      601 tpelerlflq mpttieelea aiqdnisqan sivflnqnil qeyedrrrqi etisaklesd
      661 gkelqrclae ihalkgswlp klrnlvsqin etfsrnfqem avagevslde hdtdfdqfgi
      721 lvkvkfrqag qlqvlsahhq sggersvsti lylvslqdla ncpfrvvdei nqgmdpiner
      781 kmfqqlvqaa sqpntpqcfl ltpkllpdle yseacsilni mngpwieeps kvwrngdcws
      841 tiaglaetr
//
LOCUS       XP_016703922             233 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 [Gossypium hirsutum].
ACCESSION   XP_016703922
VERSION     XP_016703922.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848433.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703922.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..233
                     /product="protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1"
                     /calculated_mol_wt=26078
     Region          96..167
                     /region_name="PLATZ"
                     /note="PLATZ transcription factor; pfam04640"
                     /db_xref="CDD:461376"
     CDS             1..233
                     /gene="LOC107918853"
                     /coded_by="XM_016848433.2:197..898"
                     /db_xref="GeneID:107918853"
ORIGIN      
        1 minidqeets svreirpksr rimggggpdd eddededmkw ppwlrpllqt sffgqcklha
       61 dahksecnmy clecmngalc slclayhkdh rtiqirrssy hdvirvseiq kliditgiqt
      121 yiinsarivf lnerpqprlg kgvtntchvc hrslldsftf cslgckvvgt skklikkgkl
      181 stemeysege slnisvsieg iqsiqqsftp stppptarrr kgvphrapmg gsl
//
LOCUS       XP_016703457             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703457
VERSION     XP_016703457.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847968.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703457.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16850
     CDS             1..158
                     /gene="LOC107918407"
                     /coded_by="XM_016847968.2:152..628"
                     /db_xref="GeneID:107918407"
ORIGIN      
        1 masciapvsi sggshlqase icfaksstfg ktpslavqrk pmasnhrfsv caeyrdgtkg
       61 ggndfaagfl lggalfgtlg yifapqirrs llnedeygfr kakrpiyydg glektrqtln
      121 akirqlnsai dnvssrlrgg nnspsvpvet dpeveatm
//
LOCUS       XP_016704987             334 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 4 [Gossypium hirsutum].
ACCESSION   XP_016704987
VERSION     XP_016704987.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704987.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="growth-regulating factor 4"
                     /calculated_mol_wt=36289
     Region          31..65
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          93..134
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..334
                     /gene="LOC107920016"
                     /coded_by="XM_016849498.2:443..1447"
                     /db_xref="GeneID:107920016"
ORIGIN      
        1 mnsggggggg gaesggvgmv amrsssssss pftvsqwqel ehqalifkym maglpvppdl
       61 vlpiqksfes ishrffhhpt mgycsfygkk vdpepgrcrr tdgkkwrcsk daypdskyce
      121 rhmhrgrnrs rkpvesqtma qslstvtslt vsgsttgggg tgtasfqslp lhafggtqvt
      181 alatgqsnyh vesipygipr kdyrsqgikp dagghsfise algsnrdtwp lmqsrvssfp
      241 qsksdgnpil lndypqlsff sdfnsgetvk hegqslrpff dewpktrdtw saleddrsnq
      301 tsfsttqlsi sipmassdfs ttsshsphge fqtp
//
LOCUS       XP_040941362             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941362
VERSION     XP_040941362.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085428.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085428.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941363             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941363
VERSION     XP_040941363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085429.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085429.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941364             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941364
VERSION     XP_040941364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085430.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085430.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941365             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941365
VERSION     XP_040941365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085431.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085431.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941366             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941366
VERSION     XP_040941366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085432.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085432.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941367             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941367
VERSION     XP_040941367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085433.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085433.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941368             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941368
VERSION     XP_040941368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085434.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085434.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941369             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941369
VERSION     XP_040941369.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085435.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085435.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941370             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941370
VERSION     XP_040941370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085436.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38451
     Region          88..272
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(145,183,200,202)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..334
                     /gene="LOC121212520"
                     /coded_by="XM_041085436.1:142..1146"
                     /db_xref="GeneID:121212520"
ORIGIN      
        1 mlaycfplii qlsnyksrii hnigllvgnl kyrrtyssqn lfepvsgrli tssqfvnhps
       61 qrsfsqsscy qkfahaeths ilrssslqhr fknwqelrkh kltastfaga igfwplrrtq
      121 lwleklgaie hfsgnlatcw snikeeeale ryklitgnti efpefqvygk mnpedswlaa
      181 spdglvnrfv yglppggvle ikcpffggdm sqafpwkrip lycipqaqgl meimdrewmd
      241 fyvwtpngss lfriyrdvky wnvlksalsd fwwkhvqpak eicsknvitd plielkslrp
      301 dsrhescgdi vrqskliadn snlliceing qlit
//
LOCUS       XP_040941371             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941371
VERSION     XP_040941371.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085437.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..177
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20249
     CDS             1..177
                     /gene="LOC121212521"
                     /coded_by="XM_041085437.1:223..756"
                     /db_xref="GeneID:121212521"
ORIGIN      
        1 mqhsshklsc emlaycfpli iqlsnyksri ihnigllvgn lkyrrtyssq nllepvsgrl
       61 itssqfvnhp sqrrfsqssc yqkfapaeth silrsssllh rfknwqelrk hkltastfag
      121 avgfflsrrt klwleklgai phtrvisivf hhpnsgvsil kfcvnlegqr plhdytd
//
LOCUS       XP_040941372             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941372
VERSION     XP_040941372.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085438.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..177
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=20249
     CDS             1..177
                     /gene="LOC121212521"
                     /coded_by="XM_041085438.1:223..756"
                     /db_xref="GeneID:121212521"
ORIGIN      
        1 mqhsshklsc emlaycfpli iqlsnyksri ihnigllvgn lkyrrtyssq nllepvsgrl
       61 itssqfvnhp sqrrfsqssc yqkfapaeth silrsssllh rfknwqelrk hkltastfag
      121 avgfflsrrt klwleklgai phtrvisivf hhpnsgvsil kfcvnlegqr plhdytd
//
LOCUS       XP_040941373             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941373
VERSION     XP_040941373.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085439.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..177
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20249
     CDS             1..177
                     /gene="LOC121212521"
                     /coded_by="XM_041085439.1:213..746"
                     /db_xref="GeneID:121212521"
ORIGIN      
        1 mqhsshklsc emlaycfpli iqlsnyksri ihnigllvgn lkyrrtyssq nllepvsgrl
       61 itssqfvnhp sqrrfsqssc yqkfapaeth silrsssllh rfknwqelrk hkltastfag
      121 avgfflsrrt klwleklgai phtrvisivf hhpnsgvsil kfcvnlegqr plhdytd
//
LOCUS       XP_040941374             143 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941374
VERSION     XP_040941374.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085440.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..143
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=16356
     CDS             1..143
                     /gene="LOC121212521"
                     /coded_by="XM_041085440.1:223..654"
                     /db_xref="GeneID:121212521"
ORIGIN      
        1 mqhsshklsw rtyssqnlle pvsgrlitss qfvnhpsqrr fsqsscyqkf apaethsilr
       61 sssllhrfkn wqelrkhklt astfagavgf flsrrtklwl eklgaiphtr visivfhhpn
      121 sgvsilkfcv nlegqrplhd ytd
//
LOCUS       XP_016704942             372 aa            linear   PLN 06-AUG-2024
DEFINITION  mastermind-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016704942
VERSION     XP_016704942.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849453.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704942.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="mastermind-like protein 2"
                     /calculated_mol_wt=42656
     Region          142..257
                     /region_name="GLTSCR1"
                     /note="Conserved region of unknown function on GLTSCR
                     protein; pfam15249"
                     /db_xref="CDD:464589"
     CDS             1..372
                     /gene="LOC107919987"
                     /coded_by="XM_016849453.2:138..1256"
                     /db_xref="GeneID:107919987"
ORIGIN      
        1 meedksvspq qrlqqqflld qqkqqqqqqq qqqqqmlllq qlqkqaqhhq qqqqaisrfp
       61 snidahlrtt pgvlpnrain ihpnpnstpn pnpnpnstpn sqqqqqpsqs qqqqqqqqrq
      121 qqqqqkqmrp lnqaelqmay qdalrvchpd fkrpfssled acerllpyhv vadyeaeedd
      181 rildsdttgq mpsrsqqwdh niaakvaeft atfekqalaf niisrkraag efrseerlmv
      241 eqallqeekr amlelraeie srekagreah eaklrmaamv qaeqaraesq ahaeimargp
      301 iranalgshg hdigeqsqgl npdemmngwg nnaprdekep sedflndeet engdtsvqne
      361 wrevgefdln sr
//
LOCUS       XP_040941375             339 aa            linear   PLN 06-AUG-2024
DEFINITION  golgin subfamily A member 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941375
VERSION     XP_040941375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085441.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..339
                     /product="golgin subfamily A member 4 isoform X1"
                     /calculated_mol_wt=37980
     Region          165..>334
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..339
                     /gene="LOC121212522"
                     /coded_by="XM_041085441.1:55..1074"
                     /db_xref="GeneID:121212522"
ORIGIN      
        1 mntrnsrvsr gqksknfqge gpnwiliagg allstlsvrl gyklkqaldt kqqdsatasl
       61 kengtsdrrr ssgcrlhsnm yafteeddgc fncmsgaeni ekhppngqil pesevalplv
      121 tvptsdfskd ngvmwasspd rlelpprpfh hsncsdspcv sesgsdifsk revihklrqh
      181 lkrrddmile mqdqimelqn slnaqvahst hlqsqldaan rdlfdserei qrlrkaiadh
      241 cvgyggtnkm tsidtvwpsd irnghangyl dvesnsdspe kgrgdgerie mlkrevgelk
      301 eviegkeyll qsykeqklel smkikelqqr ldsqlpnil
//
LOCUS       XP_040941377             337 aa            linear   PLN 06-AUG-2024
DEFINITION  golgin subfamily A member 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941377
VERSION     XP_040941377.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085443.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..337
                     /product="golgin subfamily A member 4 isoform X2"
                     /calculated_mol_wt=37764
     Region          163..>332
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..337
                     /gene="LOC121212522"
                     /coded_by="XM_041085443.1:229..1242"
                     /db_xref="GeneID:121212522"
ORIGIN      
        1 mrnsrvsrgq ksknfqgegp nwiliaggal lstlsvrlgy klkqaldtkq qdsataslke
       61 ngtsdrrrss gcrlhsnmya fteeddgcfn cmsgaeniek hppngqilpe sevalplvtv
      121 ptsdfskdng vmwasspdrl elpprpfhhs ncsdspcvse sgsdifskre vihklrqhlk
      181 rrddmilemq dqimelqnsl naqvahsthl qsqldaanrd lfdsereiqr lrkaiadhcv
      241 gyggtnkmts idtvwpsdir nghangyldv esnsdspekg rgdgerieml krevgelkev
      301 iegkeyllqs ykeqklelsm kikelqqrld sqlpnil
//
LOCUS       XP_040941378             335 aa            linear   PLN 06-AUG-2024
DEFINITION  golgin subfamily A member 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941378
VERSION     XP_040941378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085444.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..335
                     /product="golgin subfamily A member 4 isoform X3"
                     /calculated_mol_wt=37494
     Region          161..>330
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..335
                     /gene="LOC121212522"
                     /coded_by="XM_041085444.1:246..1253"
                     /db_xref="GeneID:121212522"
ORIGIN      
        1 msrvsrgqks knfqgegpnw iliaggalls tlsvrlgykl kqaldtkqqd sataslkeng
       61 tsdrrrssgc rlhsnmyaft eeddgcfncm sgaeniekhp pngqilpese valplvtvpt
      121 sdfskdngvm wasspdrlel pprpfhhsnc sdspcvsesg sdifskrevi hklrqhlkrr
      181 ddmilemqdq imelqnslna qvahsthlqs qldaanrdlf dsereiqrlr kaiadhcvgy
      241 ggtnkmtsid tvwpsdirng hangyldves nsdspekgrg dgeriemlkr evgelkevie
      301 gkeyllqsyk eqklelsmki kelqqrldsq lpnil
//
LOCUS       XP_040941379             542 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941379
VERSION     XP_040941379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085445.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..542
                     /product="uncharacterized protein"
                     /calculated_mol_wt=62627
     Region          374..535
                     /region_name="RpsE"
                     /note="Ribosomal protein S5 [Translation, ribosomal
                     structure and biogenesis]; COG0098"
                     /db_xref="CDD:439868"
     CDS             1..542
                     /gene="LOC121212523"
                     /coded_by="XM_041085445.1:201..1829"
                     /db_xref="GeneID:121212523"
ORIGIN      
        1 mstksqpssw frllhqtfqn pprtppsfsr kisspdthys sapclrnrip ktplkphspf
       61 crkistfsyf pnqqtpkspl sfmrchfsts ftsdeaiddl leelvaevel ekqkeredrk
      121 rkgldtkdid eednedymgv tpliaklekk elteqdidlm ldvptdsdte edsedendrd
      181 enkwelqfek kkkmheqllk nfceagtldd afkwmekvnk feekhfklrl eyrvigdlmn
      241 llkvaegkek filqqklnra mrllqwkeay dpnnpanygv iqqqqvdpsg dhedggelen
      301 enekkivgdd ddedeeefdd mkerdnille klnaidkkle eklaeldytf grkgklleee
      361 irdlaeerna ltekkrtply rkgfdvrlid vnrtckvtkg gqvvkytalm acgnfhgvvg
      421 yakakapavp ialqkahekc fenlhyierh eehtiahaiq ttykktkvyl wpaktttgmk
      481 agrtvenile lagfknvksk vigsrnahnt vkavfkalna vetpkdiqek fgrtvvekhl
      541 lq
//
LOCUS       XP_040941380             936 aa            linear   PLN 06-AUG-2024
DEFINITION  dual specificity protein kinase YAK1 homolog [Gossypium hirsutum].
ACCESSION   XP_040941380
VERSION     XP_040941380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085446.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..936
                     /product="dual specificity protein kinase YAK1 homolog"
                     /calculated_mol_wt=103502
     Region          123..465
                     /region_name="PKc_YAK1"
                     /note="Catalytic domain of the Dual-specificity protein
                     kinase, YAK1; cd14212"
                     /db_xref="CDD:271114"
     Site            order(129..133,137,150,152,166,187,203..206,209,211..212,
                     250,252,254..255,257,271,274,283,285..288,290,327)
                     /site_type="active"
                     /db_xref="CDD:271114"
     Site            order(129..133,137,150,152,187,203..206,209,250,252,
                     254..255,257,271)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271114"
     Site            order(166,211,250,252,274,283,285..288,290,327)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271114"
     Site            270..290
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271114"
     CDS             1..936
                     /gene="LOC121212524"
                     /coded_by="XM_041085446.1:679..3489"
                     /db_xref="GeneID:121212524"
ORIGIN      
        1 mdevgpsnqg epprtsesgs degssmrwrp rqlvfgpyst rnegdrklrv vvrrplvarl
       61 tkdiietyqi cnsqfkysee lnpkrfltsp svgvlndgyd nvnsdliltv nfvlinletq
      121 rryivkdvlg hgtfgqvakc wvpetssfva vkiiknqpay yqqalvevsi lttinkkydp
      181 edkhhivriy dyfvyqrhlc icfelldtnl yelikinhfr glslsivqlf skqilrglal
      241 lkdagiihcd lkpenillct svkpaeikii dfgsacmedr tvysyiqsry yrspevllgy
      301 qyttaidmws fgcivaelfl glplfpgase fdllrrmiri lgsqppdyvl keakntskff
      361 kcigsthdie ngevpigsrs ayqelteeey earelkkplm gkeyfshknl eaivtnypyr
      421 knlpeediik eaqirlalid flrglvefdp akrwspfqas khpfvtgepf tcpyrpppet
      481 prlpvaqnik vdhhpggghw faaglspnip nrnmvafhns phfpmvpyvh ansygsigsh
      541 gsyndntglg ssygsygess nmfayyspvg psamnmhpqs gasmlgsspd arwrfmqysq
      601 gqglgvspsa gnfaplplgt spsqftppss ysggspghyg ptsparnscq glplskmaaa
      661 gqfnrrkswg ysgssqsqes ssspnwqgqv tdgaissqae gnsqadgglp shllsnsnaa
      721 nwnqqlglgs nvqlqhspra tqdksetsmp lldpgdwdpn ysdelllqed gseegcisad
      781 fnrgmhigsa dssvgvgrfn rpsttssnls iqrqngpvgf shvevgspps andmhagypr
      841 flskhshfmp httqnypsrl gqqtaqrfnp grstgargge wnhmkvqlpp sfnslgprsp
      901 gnstfssgmp wgrranhpvs nipsgsrgrk dygria
//
LOCUS       XP_040941381             454 aa            linear   PLN 06-AUG-2024
DEFINITION  benzyl alcohol O-benzoyltransferase [Gossypium hirsutum].
ACCESSION   XP_040941381
VERSION     XP_040941381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085447.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..454
                     /product="benzyl alcohol O-benzoyltransferase"
                     /calculated_mol_wt=50307
     Region          4..435
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..454
                     /gene="LOC121212526"
                     /coded_by="XM_041085447.1:219..1583"
                     /db_xref="GeneID:121212526"
ORIGIN      
        1 matsstslvl kvhrhepeli apakptphey kllsdiddqe glrfqipviq fykynpsmqg
       61 kdpvrvirea laqalvfyyp fagrlregpq rklmvdctge glmfieadad vtleqfgdvl
      121 qppfpcleel lydvpgstgv lncpviliqv trlrcggfif alrlnhtmsd aaglaqfmsa
      181 vgemargwlt psippvwerh llaardpprv tckhreyeev egtivpyddm vhrsfffgpt
      241 evsalrklvp ehfrkcstfe lltaclwrcr tiaiqanpee evriicivna rsrfnpplps
      301 gyygnafafp vavaqagklc qnpleyslel vkqakndvte eymksladlm vikgrphftv
      361 irsylvsdvt harfgdadfg wgkavyggpa kggvgaipgv asflipvknk kgeagvvlpi
      421 tlparameif vkeldgmlkg kpierkpgfi sssl
//
LOCUS       XP_040941382             264 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941382
VERSION     XP_040941382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085448.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..264
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29915
     Region          192..>247
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..264
                     /gene="LOC121212527"
                     /coded_by="XM_041085448.1:219..1013"
                     /db_xref="GeneID:121212527"
ORIGIN      
        1 mtvvltksvr npkiwlsipi kmdcsqdqna ivgvvasvls fgalwikklk trkkitshpr
       61 vnrdyereny insilysgdq hcidvirmrp ivffnlcdil sgnnllqstk svnimeqvvi
      121 flhiighnvr frvigsrhyr sietvhhyfg vvlrailkly kpvirlpyes tpneirnnpi
      181 fypyfkdcig alggthvlas ipfsiqgrfy srkgrttqni laaitfdlkf syilvgwegs
      241 ahdsrilgda lssprgltip egkn
//
LOCUS       XP_016673518             461 aa            linear   PLN 06-AUG-2024
DEFINITION  benzyl alcohol O-benzoyltransferase [Gossypium hirsutum].
ACCESSION   XP_016673518
VERSION     XP_016673518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..461
                     /product="benzyl alcohol O-benzoyltransferase"
                     /calculated_mol_wt=51099
     Region          1..439
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..461
                     /gene="LOC107893103"
                     /coded_by="XM_016818029.2:70..1455"
                     /db_xref="GeneID:107893103"
ORIGIN      
        1 maapssiplk ftvrrcepql vapakptpye qkllsdiddq aslrfqvpli nfyqyepsme
       61 gkdpaevire alaqtlvcyy pfagrlrega ngklmvdctg egvmfikada dvtleqfgep
      121 lrppfpcfde llynvpgseg mlncpllliq vtqlkcggfi falrlnhvms dgtglaqflf
      181 algemargvi thlispvwer hlldarhpar mtfthreyde vearvttpit ilpfdnpiqr
      241 sfsfgfaevs llrsllpphl rrcttfelit aclwrcrtla inldpdeevr mlcivnarsk
      301 fnpsfpsgyy gnvfvfpaai ttvkslrekp leyavelikq akasvteeyv ksvaalmvar
      361 gkrihfpnvi gtyilsdltk agledidfgw gkavfggpii avgvisflmp tknkkgevgs
      421 vasiclpapa merfakelen mlkqqpsegk kiksksissa l
//
LOCUS       XP_016675477             461 aa            linear   PLN 06-AUG-2024
DEFINITION  benzyl alcohol O-benzoyltransferase [Gossypium hirsutum].
ACCESSION   XP_016675477
VERSION     XP_016675477.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819988.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675477.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..461
                     /product="benzyl alcohol O-benzoyltransferase"
                     /calculated_mol_wt=51190
     Region          1..439
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..461
                     /gene="LOC107894767"
                     /coded_by="XM_016819988.2:1..1386"
                     /db_xref="GeneID:107894767"
ORIGIN      
        1 meapsniplk ytvrrcepql vapakptpye qkllsdiddq aslrfqvpli nfyqyepsve
       61 gkdpaevire alaqtlvcyy pfagrlrega ngklivdctg egvmfikada dvtleqfgep
      121 lrhpflcfde llynipgseg mlncallliq vtrlkcggfi falrlnhvms dgaglaqflf
      181 tlgemargvt thlispiwer hlldarhpar iifthreyde meapvttpit ifpldnpiqh
      241 ffsfsfaevs llrsllppyl rrcttfelit aclwscrtla inldpdeevr mlcvvnarsk
      301 fnpsfpsgyy gnvfvfpaai ttvkslhgkp lgyvmelikq akasvteeyv ksvaalmvaw
      361 gkqihipnvi gtymisdltk agledidfgw gkavfggpmi evglisllmp tkntkrevgr
      421 valvclpapa verfakelen llkhqasegk ksksnsissa l
//
LOCUS       XP_016675479             301 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized metal-dependent hydrolase YabD isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016675479
VERSION     XP_016675479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819990.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..301
                     /product="uncharacterized metal-dependent hydrolase YabD
                     isoform X1"
                     /calculated_mol_wt=33147
     Region          34..292
                     /region_name="TatD_DNase"
                     /note="TatD related DNase; pfam01026"
                     /db_xref="CDD:425997"
     Site            order(37,39,161,186,236)
                     /site_type="active"
                     /db_xref="CDD:238635"
     CDS             1..301
                     /gene="LOC107894769"
                     /coded_by="XM_016819990.2:74..979"
                     /db_xref="GeneID:107894769"
ORIGIN      
        1 mkeainiklf yislavlciv ssetkirsma mklfdahchl qdqrvvdkas llihianaag
       61 vvyiavdgit ekdwhlvkem sdeydsvipn fglhpwyveg ksrswfdtlk elieanpsaa
      121 vgeigldksp lakgvdfgeq vevfkkqlql akglkrpasv hcldafpell qimkeigpfp
      181 agvilhsfqg spevvpqltk lgsyfsfsgh lmplkedkar kivkavpldr illetdapda
      241 lptnpiffvp gnatlnqpan vhsvliyvas lldlskeela disynnalrv fsfqgskipl
      301 k
//
LOCUS       XP_016675480             264 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized metal-dependent hydrolase YabD isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016675480
VERSION     XP_016675480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819991.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..264
                     /product="uncharacterized metal-dependent hydrolase YabD
                     isoform X2"
                     /calculated_mol_wt=29022
     Region          34..264
                     /region_name="TatD_DNase"
                     /note="TatD related DNase; pfam01026"
                     /db_xref="CDD:425997"
     Site            order(37,39,161,186,236)
                     /site_type="active"
                     /db_xref="CDD:238635"
     CDS             1..264
                     /gene="LOC107894769"
                     /coded_by="XM_016819991.2:76..870"
                     /db_xref="GeneID:107894769"
ORIGIN      
        1 mkeainiklf yislavlciv ssetkirsma mklfdahchl qdqrvvdkas llihianaag
       61 vvyiavdgit ekdwhlvkem sdeydsvipn fglhpwyveg ksrswfdtlk elieanpsaa
      121 vgeigldksp lakgvdfgeq vevfkkqlql akglkrpasv hcldafpell qimkeigpfp
      181 agvilhsfqg spevvpqltk lgsyfsfsgh lmplkedkar kivkavpldr illetdapda
      241 lptnpiffvp gnatlnqpan vhsi
//
LOCUS       XP_016673519             184 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BOLA4, chloroplastic/mitochondrial isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673519
VERSION     XP_016673519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..184
                     /product="protein BOLA4, chloroplastic/mitochondrial
                     isoform X1"
                     /calculated_mol_wt=20296
     Region          102..181
                     /region_name="BolA"
                     /note="DNA-binding global transcriptional regulator BolA,
                     affects cell shape, cell division and biofilm formation
                     [Transcription, Signal transduction mechanisms]; COG0271"
                     /db_xref="CDD:440041"
     CDS             1..184
                     /gene="LOC107893107"
                     /coded_by="XM_016818030.2:133..687"
                     /db_xref="GeneID:107893107"
ORIGIN      
        1 maktlittrp fffssikasl flksfplfch snnisfsshp tllpiknhpd ssffgssnin
       61 kstrnvekkn rivsrtssgi lghrrfsika thvndpgsid spliqsmekk ikehlnaesv
      121 ivqdasgdgr hvcidvvasa fdgqlvvnrq rmvykaiwee lqntvhavdq mttktpseaa
      181 asqk
//
LOCUS       XP_040941384             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941384
VERSION     XP_040941384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085450.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..164
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=18544
     CDS             1..164
                     /gene="LOC107893107"
                     /coded_by="XM_041085450.1:94..588"
                     /db_xref="GeneID:107893107"
ORIGIN      
        1 maktlittrp fffssikasl flksfplfch snnisfsshp tllpiknhpd ssffgssnin
       61 kstrnvekkn rivsrtssgi lghrrfsika thvndpgsid spliqsmekk fsvinsqata
      121 khisqswmiv rvivqsmqrh dqgtfecris hctrciwrwp aclh
//
LOCUS       XP_016673520             354 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL52 [Gossypium hirsutum].
ACCESSION   XP_016673520
VERSION     XP_016673520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..354
                     /product="RING-H2 finger protein ATL52"
                     /calculated_mol_wt=39177
     Region          139..182
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Region          140..>354
                     /region_name="RAD18"
                     /note="RING-finger-containing E3 ubiquitin ligase [Signal
                     transduction mechanisms]; COG5432"
                     /db_xref="CDD:227719"
     Site            167..172
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..354
                     /gene="LOC107893108"
                     /coded_by="XM_016818031.2:200..1264"
                     /db_xref="GeneID:107893108"
ORIGIN      
        1 mssssstpnt wspydtykdc sqgicsmycp qwcyfifppp ppfaiddddd dsstdfspli
       61 ialigilasa filvsyytii skycrrrrqs htsldfnenr deinhdgwqp gsqgldesli
      121 kaitvckfkk negliegtdc svclsefled eslrllpkcn hafhvpcidt wlkshsscpl
      181 cranitstnq pataaataqe ghrnvgvsai vyqqrneais viqdlesgvr eeavvslvvn
      241 edfgkttade ddvsdmavle irqdgdpiqp lrrsvsmsst lfsqgqamsi adilhiseed
      301 edelqssmgt gsskqfdase yycksnhrng vfnlvrspla mkrsistgry vpki
//
LOCUS       XP_040941385             627 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCAI isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941385
VERSION     XP_040941385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085451.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..627
                     /product="protein SCAI isoform X1"
                     /calculated_mol_wt=70483
     Region          24..564
                     /region_name="SCAI"
                     /note="Protein SCAI; pfam12070"
                     /db_xref="CDD:463455"
     CDS             1..627
                     /gene="LOC107893109"
                     /coded_by="XM_041085451.1:377..2260"
                     /db_xref="GeneID:107893109"
ORIGIN      
        1 msqqqmnnnt sssnipvser ywtlvdkadk kfskirdlpy yernrydtyf ykvfkvytql
       61 wkfqqenrqk lveaglkrwe igeiasrigq lyygqymrts easylseayi fyeailtrey
      121 fkegsfqdfn lankqlrfla rflmvclvln rremvhqlvn qlkmlvdeck rtfqdtdfke
      181 wklvvqeivr flkadtafmn irplryslvl dphpdvlphv aapvarknlr lrdavlssyh
      241 hnevkfselt ldtfrmlqcl ewepsgsfyl saggkngqng algssrinhs qdiadptlpp
      301 nprkavlyrp slthfiavla ticeelppdg vllvylsasg gttghtlsps gsgtcfnaae
      361 nitrdfqsht ihsdgtstss msspsnspnp sasqkkgdci syhtgclqfg ncgsgglnci
      421 ypsdlipftr rplfiiiesd asevfkaisg aekgeraall lspncsfpig ssdasrhsvg
      481 slltifltap lqafclllgi sgsdiemdty khaesllsss lndwgltlat sdnldpvwaq
      541 ilgdqflrrf llrfifcrav ltlfvqtynk eefhpecmpa lpdavsprts afqtavvqla
      601 klfhatkrfv fteaiplpdd insgtrs
//
LOCUS       XP_016673521             626 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCAI isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673521
VERSION     XP_016673521.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818032.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673521.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..626
                     /product="protein SCAI isoform X2"
                     /calculated_mol_wt=70426
     Region          24..563
                     /region_name="SCAI"
                     /note="Protein SCAI; pfam12070"
                     /db_xref="CDD:463455"
     CDS             1..626
                     /gene="LOC107893109"
                     /coded_by="XM_016818032.2:325..2205"
                     /db_xref="GeneID:107893109"
ORIGIN      
        1 msqqqmnnnt sssnipvser ywtlvdkadk kfskirdlpy yernrydtyf ykvfkvytql
       61 wkfqqenrqk lveaglkrwe igeiasrigq lyygqymrts easylseayi fyeailtrey
      121 fkegsfqdfn lankqlrfla rflmvclvln rremvhqlvn qlkmlvdeck rtfqdtdfke
      181 wklvvqeivr flkadtafmn irplryslvl dphpdvlphv aapvarknlr lrdavlssyh
      241 hnevkfselt ldtfrmlqcl ewepsgsfyl saggkngqng algssrinhs qdiadptlpp
      301 nprkavlyrp slthfiavla ticeelppdg vllvylsasg ttghtlspsg sgtcfnaaen
      361 itrdfqshti hsdgtstssm sspsnspnps asqkkgdcis yhtgclqfgn cgsgglnciy
      421 psdlipftrr plfiiiesda sevfkaisga ekgeraalll spncsfpigs sdasrhsvgs
      481 lltifltapl qafclllgis gsdiemdtyk haesllsssl ndwgltlats dnldpvwaqi
      541 lgdqflrrfl lrfifcravl tlfvqtynke efhpecmpal pdavsprtsa fqtavvqlak
      601 lfhatkrfvf teaiplpddi nsgtrs
//
LOCUS       XP_040941386             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941386
VERSION     XP_040941386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085452.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11954
     Region          <18..65
                     /region_name="NT_Pol-beta-like"
                     /note="Nucleotidyltransferase (NT) domain of DNA
                     polymerase beta and similar proteins; cl11966"
                     /db_xref="CDD:472251"
     CDS             1..110
                     /gene="LOC121212528"
                     /coded_by="XM_041085452.1:1062..1394"
                     /db_xref="GeneID:121212528"
ORIGIN      
        1 mlsalshqnm eenlaryicn ilqdnqqnse vlvqdvqyir aqvkivkctv ndipvdisfn
       61 qtaglsalcf lekrslrrqg lrpkirspsa vgsatsatvh sgrkskkggg
//
LOCUS       XP_040941387             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941387
VERSION     XP_040941387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085453.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11954
     Region          <18..65
                     /region_name="NT_Pol-beta-like"
                     /note="Nucleotidyltransferase (NT) domain of DNA
                     polymerase beta and similar proteins; cl11966"
                     /db_xref="CDD:472251"
     CDS             1..110
                     /gene="LOC121212528"
                     /coded_by="XM_041085453.1:338..670"
                     /db_xref="GeneID:121212528"
ORIGIN      
        1 mlsalshqnm eenlaryicn ilqdnqqnse vlvqdvqyir aqvkivkctv ndipvdisfn
       61 qtaglsalcf lekrslrrqg lrpkirspsa vgsatsatvh sgrkskkggg
//
LOCUS       XP_016673523             720 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g23330
            [Gossypium hirsutum].
ACCESSION   XP_016673523
VERSION     XP_016673523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818034.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..720
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g23330"
                     /calculated_mol_wt=81361
     Region          75..102
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          108..137
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          114..720
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          143..179
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          214..241
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          247..311
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          315..342
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          387..412
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          416..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..479
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          485..511
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          551..580
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..720
                     /gene="LOC107893115"
                     /coded_by="XM_016818034.2:224..2386"
                     /db_xref="GeneID:107893115"
ORIGIN      
        1 mtskstaktl vktflrtphs lktkfqakql laqflktqpy spsstsilis vysnfnllhp
       61 slflfnslns ppllawksii kcyansghfl nsltsfvqmr sfgiypdpnm fplvlkacvf
      121 lknlrlgesi hgciirlgld fdlftgnall nmyakfqslq pnggrkvfaf nvfdgmpksd
      181 elcgtsaqek gasiiqlesm tkvlemmpir dvvswntvia gnaqngmyee alrmvremgn
      241 anmkpdsftl ssvlpifaey vdaitgkeih gyairhwfds dcyiasslid myancaried
      301 scsvfnllsk rddiswnsii aacvqngvfd eglklfrqml takvkprdvt fssimpacay
      361 lttlhlgkql hgyiirggfn dnmfiasslv dmyakcgnik aarwifdqme hhdmvswtai
      421 imgyalhgha hdalllfkqm emdgfkpnyv syiavftacs hagltdeawr yfnsmsrnhg
      481 ikpglehyaa madllgragk leeaykfigs mhiaptgsiw stllsacrvh knlelaekva
      541 neifkvdpen vgayvlmsnm yaaarrwkda akmrifmrkk girkepacsw ievknrvhtf
      601 isgdkshply drifealkdl lqqieregyi pdtnedfhdv deeqkkymif shserlalaf
      661 giistpagtt iritknirvc vdchtaikli skvvqreiiv rdnsrfhhfk dgkcscrdyw
//
LOCUS       XP_016673524             275 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016673524
VERSION     XP_016673524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818035.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="50S ribosomal protein L3, chloroplastic"
                     /calculated_mol_wt=29840
     Region          60..271
                     /region_name="RplC"
                     /note="Ribosomal protein L3 [Translation, ribosomal
                     structure and biogenesis]; COG0087"
                     /db_xref="CDD:439857"
     CDS             1..275
                     /gene="LOC107893116"
                     /coded_by="XM_016818035.2:265..1092"
                     /db_xref="GeneID:107893116"
ORIGIN      
        1 mpiatlslhs lgyccqkspp fsfkssflsk ptktqfsfaf kttekrpfsh ivsmsmeagi
       61 gvmgtklgmm sffetdgtvv pvtvvgfreg nivtqvktsa tdgydavqvg yrrvrdkklt
      121 kpelghlgka gvipmrhlqe frlqsvgefe tgqklaveei fkegdlvdvs gttigkgfqg
      181 gikrhnfkrg qmshgskshr algsigagtt pgrvykgkkm pgrmggskrk irklkivkid
      241 nelrvvmikg alpgkpgnll ritpskivgk nipks
//
LOCUS       XP_016673525             447 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 [Gossypium hirsutum].
ACCESSION   XP_016673525
VERSION     XP_016673525.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673525.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..447
                     /product="UPF0481 protein At3g47200"
                     /calculated_mol_wt=51516
     Region          41..436
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..447
                     /gene="LOC107893117"
                     /coded_by="XM_016818036.2:145..1488"
                     /db_xref="GeneID:107893117"
ORIGIN      
        1 maprkgqlgs inapsfetkk deasndseve dlergldqgf iyevprnirq anpkaytpll
       61 isigplhyrk tslasmakyk vdyqdkflqr tsvskeales fwsfiernek iilycyeali
      121 dedefvkmif ydalfivelf lrnyekevek nsdikdfllk etwsaglrrd lillenqipm
      181 fvleelykpy enhklasdas vpsflklacs yfdipwdpqf ehiqiphfta lqrchmtktq
      241 npssktkipt lkkvydatsl hevgveliae pnqtaclldv kfdgkklkip kftvhsntea
      301 ylrnimafem chcpdeayvc ayielmnyli rtaqdveqli ekgilskegk negklvtiin
      361 tniavqrmik klmqgigepp acyretanrl nqlykegrkr kvtlfikeny gilkrvyfpn
      421 lwrgtgtvaa fmvvvltciq tvlafvn
//
LOCUS       XP_040941388             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941388
VERSION     XP_040941388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085454.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085454.1:540..2057"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941389             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941389
VERSION     XP_040941389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085455.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085455.1:484..2001"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941390             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941390
VERSION     XP_040941390.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085456.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085456.1:563..2080"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941391             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941391
VERSION     XP_040941391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085457.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085457.1:462..1979"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941392             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941392
VERSION     XP_040941392.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085458.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085458.1:540..2057"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941393             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941393
VERSION     XP_040941393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085459.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085459.1:357..1874"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941394             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941394
VERSION     XP_040941394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085460.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085460.1:711..2228"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941395             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941395
VERSION     XP_040941395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085461.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085461.1:817..2334"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941396             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941396
VERSION     XP_040941396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085462.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085462.1:485..2002"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941397             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941397
VERSION     XP_040941397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085463.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085463.1:563..2080"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941398             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941398
VERSION     XP_040941398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085464.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085464.1:524..2041"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941399             505 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941399
VERSION     XP_040941399.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085465.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="MLO-like protein 1"
                     /calculated_mol_wt=57199
     Region          8..455
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..505
                     /gene="LOC107893118"
                     /coded_by="XM_041085465.1:467..1984"
                     /db_xref="GeneID:107893118"
ORIGIN      
        1 msggaeegvt lehtptwiva aictvivais lamerllhvv gnvlkrkqqk plfeallkvk
       61 eelmllgfis llltvfqnai skicvssdvl tsmlpckred nketgegsnh ttshfqkyfa
      121 ltlsggtrhl laetpstgyc akkgkvplls vealhqlhif ifvlaivhvt fcvltvsfgg
      181 lkirewkrwe dsiaeknyds eqvlkkkvth vqqhafiqeh fqglgknsil lgwvhsffkq
      241 fyasvtksdy vtlrlgfimt hcrgnpkfnf hrymiraled dfkqvvgisw ylwvfvvifl
      301 llnvngwhty fwiafipfil llavgtkleh vitqlaheva ekhvaiegel vvqpsddhfw
      361 fnrprivlfl ihfilfqnaf eiafffwiwv qfgfdscimg qvryivprlv igvfiqvlcs
      421 ystlplyaiv tqmgssfkks ifdehvqvgl vgwaqkvkkk kglkaatgsa aqenseqnps
      481 aaiqmgrvlr nasapeeihp shgty
//
LOCUS       XP_040941400             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein slr1919 [Gossypium hirsutum].
ACCESSION   XP_040941400
VERSION     XP_040941400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085466.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein slr1919"
                     /calculated_mol_wt=19505
     Region          <21..107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..176
                     /gene="LOC107893120"
                     /coded_by="XM_041085466.1:467..997"
                     /db_xref="GeneID:107893120"
ORIGIN      
        1 mvivcniheq illlfslfmp ilpvlakvfd qalegggvkn infqdlasdl aqitfdypfr
       61 ippyfaliir aigvlegial vgnpdiaivd eaypyiaqrl ltdefprlrn alrytiygks
      121 gvfdaerfid vmqafenfii atksgggenl ngdmaelgll qrqvdisfpr flsses
//
LOCUS       XP_040941401             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein slr1919 [Gossypium hirsutum].
ACCESSION   XP_040941401
VERSION     XP_040941401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085467.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein slr1919"
                     /calculated_mol_wt=19505
     Region          <21..107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..176
                     /gene="LOC107893120"
                     /coded_by="XM_041085467.1:985..1515"
                     /db_xref="GeneID:107893120"
ORIGIN      
        1 mvivcniheq illlfslfmp ilpvlakvfd qalegggvkn infqdlasdl aqitfdypfr
       61 ippyfaliir aigvlegial vgnpdiaivd eaypyiaqrl ltdefprlrn alrytiygks
      121 gvfdaerfid vmqafenfii atksgggenl ngdmaelgll qrqvdisfpr flsses
//
LOCUS       XP_040941402             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein slr1919 [Gossypium hirsutum].
ACCESSION   XP_040941402
VERSION     XP_040941402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085468.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein slr1919"
                     /calculated_mol_wt=19505
     Region          <21..107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..176
                     /gene="LOC107893120"
                     /coded_by="XM_041085468.1:698..1228"
                     /db_xref="GeneID:107893120"
ORIGIN      
        1 mvivcniheq illlfslfmp ilpvlakvfd qalegggvkn infqdlasdl aqitfdypfr
       61 ippyfaliir aigvlegial vgnpdiaivd eaypyiaqrl ltdefprlrn alrytiygks
      121 gvfdaerfid vmqafenfii atksgggenl ngdmaelgll qrqvdisfpr flsses
//
LOCUS       XP_040941403             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein slr1919 [Gossypium hirsutum].
ACCESSION   XP_040941403
VERSION     XP_040941403.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085469.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein slr1919"
                     /calculated_mol_wt=19505
     Region          <21..107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..176
                     /gene="LOC107893120"
                     /coded_by="XM_041085469.1:672..1202"
                     /db_xref="GeneID:107893120"
ORIGIN      
        1 mvivcniheq illlfslfmp ilpvlakvfd qalegggvkn infqdlasdl aqitfdypfr
       61 ippyfaliir aigvlegial vgnpdiaivd eaypyiaqrl ltdefprlrn alrytiygks
      121 gvfdaerfid vmqafenfii atksgggenl ngdmaelgll qrqvdisfpr flsses
//
LOCUS       XP_040941404             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein slr1919 [Gossypium hirsutum].
ACCESSION   XP_040941404
VERSION     XP_040941404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085470.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein slr1919"
                     /calculated_mol_wt=19505
     Region          <21..107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..176
                     /gene="LOC107893120"
                     /coded_by="XM_041085470.1:539..1069"
                     /db_xref="GeneID:107893120"
ORIGIN      
        1 mvivcniheq illlfslfmp ilpvlakvfd qalegggvkn infqdlasdl aqitfdypfr
       61 ippyfaliir aigvlegial vgnpdiaivd eaypyiaqrl ltdefprlrn alrytiygks
      121 gvfdaerfid vmqafenfii atksgggenl ngdmaelgll qrqvdisfpr flsses
//
LOCUS       XP_040941405             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein slr1919 [Gossypium hirsutum].
ACCESSION   XP_040941405
VERSION     XP_040941405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085471.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein slr1919"
                     /calculated_mol_wt=19505
     Region          <21..107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..176
                     /gene="LOC107893120"
                     /coded_by="XM_041085471.1:267..797"
                     /db_xref="GeneID:107893120"
ORIGIN      
        1 mvivcniheq illlfslfmp ilpvlakvfd qalegggvkn infqdlasdl aqitfdypfr
       61 ippyfaliir aigvlegial vgnpdiaivd eaypyiaqrl ltdefprlrn alrytiygks
      121 gvfdaerfid vmqafenfii atksgggenl ngdmaelgll qrqvdisfpr flsses
//
LOCUS       XP_016673531            2054 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: TATA-binding protein-associated factor BTAF1
            [Gossypium hirsutum].
ACCESSION   XP_016673531
VERSION     XP_016673531.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818042.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673531.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2054
                     /product="LOW QUALITY PROTEIN: TATA-binding
                     protein-associated factor BTAF1"
                     /calculated_mol_wt=227530
     Region          516..541
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          554..582
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          788..1245
                     /region_name="DUF3535"
                     /note="Domain of unknown function (DUF3535); pfam12054"
                     /db_xref="CDD:463447"
     Region          1331..1971
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     CDS             1..2054
                     /gene="LOC107893121"
                     /coded_by="XM_016818042.2:290..6454"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107893121"
ORIGIN      
        1 maqqqssrln rlltlldtgs tqatrftaar qigdiakshp qdlssllkkv ssylhsknwe
       61 trvaaahaig aiaqnvkhts ladlfssvga kmtgagvsan vkdvvvspel hskivsgvsf
      121 rsfdinkvle fgallasggq eydiandnlk npkerlarqk qnlkrrlgld mceqfmdvgd
      181 mirdedlvvh kyhqgngldn rfytppsvnn iqqfvsrmvp nviskrrpsa relnmlkrka
      241 kinskdqakg wsddgdtels pahnvstprg acpdplgssk fdavtdedss dhdgdgrwpf
      301 rsfveqlild mfdpvweirh gsvmalreil thhggsagvy lpdlnsddal flevkdieyp
      361 skikrereid lnmqvspdel epnlkkpkie depflvldkv psadqhggfd vaikiedsaw
      421 tfpsgqfngq hdissmkmet efydndvmyq skeavvveep ksyyedkgaf ansdvlkdlp
      481 encelinlvk larhswlknc eflqdcavrf lcvlsldrfg dyvsdqvvap vretcaqalg
      541 atfkymhpsl vhetlnvllq mqrrpeweir hgsllgikyl vavrqemlqd llgyvlpack
      601 agledpdddv ravaadalip aadaivalkg qslhsivmll wdilldlddl spstssvmnl
      661 laeiysqedm mpkmfgtsta kekqnfdlne vvdvdevgea kdlqenpyml smlaprlwpf
      721 mrhsitsvrh sailtlerll eagykrsise psgssfwpsf ilgdtlrivf qnlllesnee
      781 ilqcservwr llvqcpvgdl evaaasfmss wielattsyg stldatkmfw pvalprkshh
      841 kaaaxmkavk lenesygttg ldsvrgavsq enngdtssnl vkiivgadae msvtntrvit
      901 asalgifask lqanslqyvv dplwnaltsl sgvqrqvasv vliswfkeik srdssgnqei
      961 ihsfpdhlrk wlldllacsd pafptkdsvl pyaelsrtfa kmrneasqll havessgmfv
     1021 dilstmkvnv esvtvdeais fasklsllss dnaenesmkr niddiesakq rliatsgylk
     1081 cvqsnlhvtv tslvaaavvw mselparlnp iilplmasik reqeeilqqk aaealaeliy
     1141 hciarkpspn dkliknicsl tcsdpsetpq aavinsmeii ddqdflsfgt stgkpkskvh
     1201 mlagaedrsk vegfisrrgs elalrhlcek fgptlfeklp kvwdcitevl lpsspsedhq
     1261 ivqavesvkd pqilinniqv vrsiapvlde slkpkllmll pcifkcishs hvavrlaasr
     1321 cimtmaksmt vnvmravien aipmlgdvts vharqgagml itllvqglsv elvpyapllv
     1381 vpllrcmsdc dhsvrqsvtr sfaalvpllp larglpppvg lseglsrnte dakfleqlld
     1441 nshiddyklf telkvtlrry qqeginwlaf lkrfklhgil cddmglgktl qasaivasei
     1501 aeyrasnkdv dpppslivcp stlvghwafe iekyidasli stlqyvgsvq drvalreqfd
     1561 khnvvitsyd vvrkdaecla qfpwnycild eghiiksaks kitlavkqlk aqhrlilsgt
     1621 piqnnimdlw slfdflmpgf lgterqfqat ygkpllaard pkcsakdaea galamealhk
     1681 qvmpfllrrt kdevlsdlpe kiiqdrycdl spaqlllyeq fsgshvkqei ssmvktdesg
     1741 vaggakqtsp kasthvfqal qyllklcshp llvvgdkvpe sltsqlsdlf pansdvisel
     1801 rklhhspklv alqeileecg igvdtsasdg avtvgqhrvl ifaqhkalld iiekdlfhth
     1861 mknvtylrld gsvepekrfd ivkafnsdpt idallltthv gglglnltsa dtlifmehdw
     1921 npmrdhqamd rahrlgqrkv vnvhrlimrg tleekvmslq rfklsvanav inaenaslkt
     1981 mntdqlldlf asaetskkga taskrsdsgi dgdpklmgtg kglkailggl eelwdqsqyt
     2041 eeynlsqfla klns
//
LOCUS       XP_016673533             302 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol transfer protein 3 [Gossypium hirsutum].
ACCESSION   XP_016673533
VERSION     XP_016673533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..302
                     /product="phosphatidylinositol transfer protein 3"
                     /calculated_mol_wt=34528
     Region          21..68
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          88..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..302
                     /gene="LOC107893122"
                     /coded_by="XM_016818044.2:420..1328"
                     /db_xref="GeneID:107893122"
ORIGIN      
        1 mssiqlkrga sdkslspvdq qakiddvrkl igpvvdklpv lcsdasilrf lrarnwntkk
       61 askmlketlk wrlqykpeai rwediaqeae tgkvyranyc dklgrpvlvm rpglqntnsp
      121 vgqikylvyc ienaimnlvq dqeqmvwlvd fqgwamtsis vkvtretari lqdhyperlg
      181 igilynppki fesfwtivkp fletktykkm kfvysddpks lkvieeifdl dkldvafggr
      241 npagfnlevy arqmkdddsk rmnfhgsgcs spfyhsssls esqqhestdl drdsnasdeg
      301 rl
//
LOCUS       XP_016673532             302 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol transfer protein 3 [Gossypium hirsutum].
ACCESSION   XP_016673532
VERSION     XP_016673532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..302
                     /product="phosphatidylinositol transfer protein 3"
                     /calculated_mol_wt=34528
     Region          21..68
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          88..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..302
                     /gene="LOC107893122"
                     /coded_by="XM_016818043.2:278..1186"
                     /db_xref="GeneID:107893122"
ORIGIN      
        1 mssiqlkrga sdkslspvdq qakiddvrkl igpvvdklpv lcsdasilrf lrarnwntkk
       61 askmlketlk wrlqykpeai rwediaqeae tgkvyranyc dklgrpvlvm rpglqntnsp
      121 vgqikylvyc ienaimnlvq dqeqmvwlvd fqgwamtsis vkvtretari lqdhyperlg
      181 igilynppki fesfwtivkp fletktykkm kfvysddpks lkvieeifdl dkldvafggr
      241 npagfnlevy arqmkdddsk rmnfhgsgcs spfyhsssls esqqhestdl drdsnasdeg
      301 rl
//
LOCUS       XP_040941406             302 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol transfer protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941406
VERSION     XP_040941406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085472.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..302
                     /product="phosphatidylinositol transfer protein 3"
                     /calculated_mol_wt=34528
     Region          21..68
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          88..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..302
                     /gene="LOC107893122"
                     /coded_by="XM_041085472.1:148..1056"
                     /db_xref="GeneID:107893122"
ORIGIN      
        1 mssiqlkrga sdkslspvdq qakiddvrkl igpvvdklpv lcsdasilrf lrarnwntkk
       61 askmlketlk wrlqykpeai rwediaqeae tgkvyranyc dklgrpvlvm rpglqntnsp
      121 vgqikylvyc ienaimnlvq dqeqmvwlvd fqgwamtsis vkvtretari lqdhyperlg
      181 igilynppki fesfwtivkp fletktykkm kfvysddpks lkvieeifdl dkldvafggr
      241 npagfnlevy arqmkdddsk rmnfhgsgcs spfyhsssls esqqhestdl drdsnasdeg
      301 rl
//
LOCUS       XP_040941407             302 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol transfer protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941407
VERSION     XP_040941407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085473.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..302
                     /product="phosphatidylinositol transfer protein 3"
                     /calculated_mol_wt=34528
     Region          21..68
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          88..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..302
                     /gene="LOC107893122"
                     /coded_by="XM_041085473.1:179..1087"
                     /db_xref="GeneID:107893122"
ORIGIN      
        1 mssiqlkrga sdkslspvdq qakiddvrkl igpvvdklpv lcsdasilrf lrarnwntkk
       61 askmlketlk wrlqykpeai rwediaqeae tgkvyranyc dklgrpvlvm rpglqntnsp
      121 vgqikylvyc ienaimnlvq dqeqmvwlvd fqgwamtsis vkvtretari lqdhyperlg
      181 igilynppki fesfwtivkp fletktykkm kfvysddpks lkvieeifdl dkldvafggr
      241 npagfnlevy arqmkdddsk rmnfhgsgcs spfyhsssls esqqhestdl drdsnasdeg
      301 rl
//
LOCUS       XP_040941408             302 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol transfer protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941408
VERSION     XP_040941408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085474.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..302
                     /product="phosphatidylinositol transfer protein 3"
                     /calculated_mol_wt=34528
     Region          21..68
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          88..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..302
                     /gene="LOC107893122"
                     /coded_by="XM_041085474.1:307..1215"
                     /db_xref="GeneID:107893122"
ORIGIN      
        1 mssiqlkrga sdkslspvdq qakiddvrkl igpvvdklpv lcsdasilrf lrarnwntkk
       61 askmlketlk wrlqykpeai rwediaqeae tgkvyranyc dklgrpvlvm rpglqntnsp
      121 vgqikylvyc ienaimnlvq dqeqmvwlvd fqgwamtsis vkvtretari lqdhyperlg
      181 igilynppki fesfwtivkp fletktykkm kfvysddpks lkvieeifdl dkldvafggr
      241 npagfnlevy arqmkdddsk rmnfhgsgcs spfyhsssls esqqhestdl drdsnasdeg
      301 rl
//
LOCUS       XP_040941409            1509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941409
VERSION     XP_040941409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085475.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1509
                     /product="uncharacterized protein"
                     /calculated_mol_wt=166730
     CDS             1..1509
                     /gene="LOC107894414"
                     /coded_by="XM_041085475.1:307..4836"
                     /db_xref="GeneID:107894414"
ORIGIN      
        1 mglermdvgv kvrkfivisv rtcykfvcsh pflvglacfl iflyrsfpll fsflvtaspv
       61 lvctavllgt llsfgspnip eidkheeenv shevsplktg vseddtvvkr dfndddfvve
      121 rhvgkrwdia enadekvslv dnevneveeg dgsvlykpli nddldsrdvh cengmiveve
      181 gllnhsllek mtgirgemle servlsmrra eesqhllaee vgdrnvelgd gkltsyiddv
      241 prgneldssl vsswkcvtgd edagdgdkdd ddnddddess dsgsdgaess spdasladis
      301 lmldelhpll gseaiqaaql srdgldsase sshgssddes desenkgege nneeeggakg
      361 dnedesksai kwteddqknl mdlgnlever nlrldkliar rrarksmrlm aeknlidldf
      421 adiplnlapi stsrgnpfdl pysyddlglp pipgsapsnl qprrnpfdlp ydsseekpdl
      481 kgdsfqeefs gfnqrgtnsq reaffsrhes fnvgssslgv prqelkwkpy fvpeqlvteg
      541 aspslfqrqs sevsesklss ipdsesvssv vdeednkpnk qdvsreteli lnedhvsvde
      601 qeshssdsdd vesmdvdqve nrdvhhdvve itlgdgeshl eiepvseaga tdhsehtase
      661 aenrdvhhdt vvitlgdvar atthvelnat eihprtepae edyssrssls slseidekis
      721 dvkgvvsagc eprdnelkes giskklsfee sefhftsgvv ddnqhtesif yssfhppsve
      781 tflsfstvss dkqaeisemg spsmlvesid ekheahgema eqgtssfqvm hggssdllng
      841 neprerdlpe iikhevtfag samvsstsad ynasmvpeyv veyvsrears ssdegleedv
      901 pnkeessiqn hvdllslgae ttlaidegmg evvdsspeeq qhqrhpness eaniweehkm
      961 esemdqtqap fsdsktntgc degvpsnssh qdlssresps sesekqllfd kdelpvdehd
     1021 kleepsiiat estrgadivn tdinvhevdd sedklsanfs lmtsgssslp seilehtlpm
     1081 dredlkekvl keienegpdd hfgyadvyap rvdeennnee vdeikeider ilseldtvgd
     1141 fnvgeiglpe rshvaytesa mladdmetet svglpvlear svedidlafk qlhegadfee
     1201 vilprmiknq pdhadtnsdl pvvevrsled ihnallqdpe pnlaqlphst dlrngsseve
     1261 qhvivsseei evsnavsgie egfdnaagep kneeeieelk tetnvelpvl earsvedidl
     1321 afkqlhegvd veevilpsmi enlpdhtdtt sefpvveais ldgihnafik gpepnpaelp
     1381 htadlrhgss eveqhdvvcs neievgqavs gfeehlqnva pgepkkeyee ieelkmetna
     1441 elpvldarsv edidlafkql hegvdveevv lasmiedqld heilrlssng imlqkvqnli
     1501 wpschfpqt
//
LOCUS       XP_040941410            1509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941410
VERSION     XP_040941410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085476.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1509
                     /product="uncharacterized protein"
                     /calculated_mol_wt=166730
     CDS             1..1509
                     /gene="LOC107894414"
                     /coded_by="XM_041085476.1:386..4915"
                     /db_xref="GeneID:107894414"
ORIGIN      
        1 mglermdvgv kvrkfivisv rtcykfvcsh pflvglacfl iflyrsfpll fsflvtaspv
       61 lvctavllgt llsfgspnip eidkheeenv shevsplktg vseddtvvkr dfndddfvve
      121 rhvgkrwdia enadekvslv dnevneveeg dgsvlykpli nddldsrdvh cengmiveve
      181 gllnhsllek mtgirgemle servlsmrra eesqhllaee vgdrnvelgd gkltsyiddv
      241 prgneldssl vsswkcvtgd edagdgdkdd ddnddddess dsgsdgaess spdasladis
      301 lmldelhpll gseaiqaaql srdgldsase sshgssddes desenkgege nneeeggakg
      361 dnedesksai kwteddqknl mdlgnlever nlrldkliar rrarksmrlm aeknlidldf
      421 adiplnlapi stsrgnpfdl pysyddlglp pipgsapsnl qprrnpfdlp ydsseekpdl
      481 kgdsfqeefs gfnqrgtnsq reaffsrhes fnvgssslgv prqelkwkpy fvpeqlvteg
      541 aspslfqrqs sevsesklss ipdsesvssv vdeednkpnk qdvsreteli lnedhvsvde
      601 qeshssdsdd vesmdvdqve nrdvhhdvve itlgdgeshl eiepvseaga tdhsehtase
      661 aenrdvhhdt vvitlgdvar atthvelnat eihprtepae edyssrssls slseidekis
      721 dvkgvvsagc eprdnelkes giskklsfee sefhftsgvv ddnqhtesif yssfhppsve
      781 tflsfstvss dkqaeisemg spsmlvesid ekheahgema eqgtssfqvm hggssdllng
      841 neprerdlpe iikhevtfag samvsstsad ynasmvpeyv veyvsrears ssdegleedv
      901 pnkeessiqn hvdllslgae ttlaidegmg evvdsspeeq qhqrhpness eaniweehkm
      961 esemdqtqap fsdsktntgc degvpsnssh qdlssresps sesekqllfd kdelpvdehd
     1021 kleepsiiat estrgadivn tdinvhevdd sedklsanfs lmtsgssslp seilehtlpm
     1081 dredlkekvl keienegpdd hfgyadvyap rvdeennnee vdeikeider ilseldtvgd
     1141 fnvgeiglpe rshvaytesa mladdmetet svglpvlear svedidlafk qlhegadfee
     1201 vilprmiknq pdhadtnsdl pvvevrsled ihnallqdpe pnlaqlphst dlrngsseve
     1261 qhvivsseei evsnavsgie egfdnaagep kneeeieelk tetnvelpvl earsvedidl
     1321 afkqlhegvd veevilpsmi enlpdhtdtt sefpvveais ldgihnafik gpepnpaelp
     1381 htadlrhgss eveqhdvvcs neievgqavs gfeehlqnva pgepkkeyee ieelkmetna
     1441 elpvldarsv edidlafkql hegvdveevv lasmiedqld heilrlssng imlqkvqnli
     1501 wpschfpqt
//
LOCUS       XP_040941411            1509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941411
VERSION     XP_040941411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085477.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1509
                     /product="uncharacterized protein"
                     /calculated_mol_wt=166730
     CDS             1..1509
                     /gene="LOC107894414"
                     /coded_by="XM_041085477.1:190..4719"
                     /db_xref="GeneID:107894414"
ORIGIN      
        1 mglermdvgv kvrkfivisv rtcykfvcsh pflvglacfl iflyrsfpll fsflvtaspv
       61 lvctavllgt llsfgspnip eidkheeenv shevsplktg vseddtvvkr dfndddfvve
      121 rhvgkrwdia enadekvslv dnevneveeg dgsvlykpli nddldsrdvh cengmiveve
      181 gllnhsllek mtgirgemle servlsmrra eesqhllaee vgdrnvelgd gkltsyiddv
      241 prgneldssl vsswkcvtgd edagdgdkdd ddnddddess dsgsdgaess spdasladis
      301 lmldelhpll gseaiqaaql srdgldsase sshgssddes desenkgege nneeeggakg
      361 dnedesksai kwteddqknl mdlgnlever nlrldkliar rrarksmrlm aeknlidldf
      421 adiplnlapi stsrgnpfdl pysyddlglp pipgsapsnl qprrnpfdlp ydsseekpdl
      481 kgdsfqeefs gfnqrgtnsq reaffsrhes fnvgssslgv prqelkwkpy fvpeqlvteg
      541 aspslfqrqs sevsesklss ipdsesvssv vdeednkpnk qdvsreteli lnedhvsvde
      601 qeshssdsdd vesmdvdqve nrdvhhdvve itlgdgeshl eiepvseaga tdhsehtase
      661 aenrdvhhdt vvitlgdvar atthvelnat eihprtepae edyssrssls slseidekis
      721 dvkgvvsagc eprdnelkes giskklsfee sefhftsgvv ddnqhtesif yssfhppsve
      781 tflsfstvss dkqaeisemg spsmlvesid ekheahgema eqgtssfqvm hggssdllng
      841 neprerdlpe iikhevtfag samvsstsad ynasmvpeyv veyvsrears ssdegleedv
      901 pnkeessiqn hvdllslgae ttlaidegmg evvdsspeeq qhqrhpness eaniweehkm
      961 esemdqtqap fsdsktntgc degvpsnssh qdlssresps sesekqllfd kdelpvdehd
     1021 kleepsiiat estrgadivn tdinvhevdd sedklsanfs lmtsgssslp seilehtlpm
     1081 dredlkekvl keienegpdd hfgyadvyap rvdeennnee vdeikeider ilseldtvgd
     1141 fnvgeiglpe rshvaytesa mladdmetet svglpvlear svedidlafk qlhegadfee
     1201 vilprmiknq pdhadtnsdl pvvevrsled ihnallqdpe pnlaqlphst dlrngsseve
     1261 qhvivsseei evsnavsgie egfdnaagep kneeeieelk tetnvelpvl earsvedidl
     1321 afkqlhegvd veevilpsmi enlpdhtdtt sefpvveais ldgihnafik gpepnpaelp
     1381 htadlrhgss eveqhdvvcs neievgqavs gfeehlqnva pgepkkeyee ieelkmetna
     1441 elpvldarsv edidlafkql hegvdveevv lasmiedqld heilrlssng imlqkvqnli
     1501 wpschfpqt
//
LOCUS       XP_016675181            1509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675181
VERSION     XP_016675181.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819692.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675181.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1509
                     /product="uncharacterized protein"
                     /calculated_mol_wt=166730
     CDS             1..1509
                     /gene="LOC107894414"
                     /coded_by="XM_016819692.2:482..5011"
                     /db_xref="GeneID:107894414"
ORIGIN      
        1 mglermdvgv kvrkfivisv rtcykfvcsh pflvglacfl iflyrsfpll fsflvtaspv
       61 lvctavllgt llsfgspnip eidkheeenv shevsplktg vseddtvvkr dfndddfvve
      121 rhvgkrwdia enadekvslv dnevneveeg dgsvlykpli nddldsrdvh cengmiveve
      181 gllnhsllek mtgirgemle servlsmrra eesqhllaee vgdrnvelgd gkltsyiddv
      241 prgneldssl vsswkcvtgd edagdgdkdd ddnddddess dsgsdgaess spdasladis
      301 lmldelhpll gseaiqaaql srdgldsase sshgssddes desenkgege nneeeggakg
      361 dnedesksai kwteddqknl mdlgnlever nlrldkliar rrarksmrlm aeknlidldf
      421 adiplnlapi stsrgnpfdl pysyddlglp pipgsapsnl qprrnpfdlp ydsseekpdl
      481 kgdsfqeefs gfnqrgtnsq reaffsrhes fnvgssslgv prqelkwkpy fvpeqlvteg
      541 aspslfqrqs sevsesklss ipdsesvssv vdeednkpnk qdvsreteli lnedhvsvde
      601 qeshssdsdd vesmdvdqve nrdvhhdvve itlgdgeshl eiepvseaga tdhsehtase
      661 aenrdvhhdt vvitlgdvar atthvelnat eihprtepae edyssrssls slseidekis
      721 dvkgvvsagc eprdnelkes giskklsfee sefhftsgvv ddnqhtesif yssfhppsve
      781 tflsfstvss dkqaeisemg spsmlvesid ekheahgema eqgtssfqvm hggssdllng
      841 neprerdlpe iikhevtfag samvsstsad ynasmvpeyv veyvsrears ssdegleedv
      901 pnkeessiqn hvdllslgae ttlaidegmg evvdsspeeq qhqrhpness eaniweehkm
      961 esemdqtqap fsdsktntgc degvpsnssh qdlssresps sesekqllfd kdelpvdehd
     1021 kleepsiiat estrgadivn tdinvhevdd sedklsanfs lmtsgssslp seilehtlpm
     1081 dredlkekvl keienegpdd hfgyadvyap rvdeennnee vdeikeider ilseldtvgd
     1141 fnvgeiglpe rshvaytesa mladdmetet svglpvlear svedidlafk qlhegadfee
     1201 vilprmiknq pdhadtnsdl pvvevrsled ihnallqdpe pnlaqlphst dlrngsseve
     1261 qhvivsseei evsnavsgie egfdnaagep kneeeieelk tetnvelpvl earsvedidl
     1321 afkqlhegvd veevilpsmi enlpdhtdtt sefpvveais ldgihnafik gpepnpaelp
     1381 htadlrhgss eveqhdvvcs neievgqavs gfeehlqnva pgepkkeyee ieelkmetna
     1441 elpvldarsv edidlafkql hegvdveevv lasmiedqld heilrlssng imlqkvqnli
     1501 wpschfpqt
//
LOCUS       XP_040941412            1509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941412
VERSION     XP_040941412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085478.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1509
                     /product="uncharacterized protein"
                     /calculated_mol_wt=166730
     CDS             1..1509
                     /gene="LOC107894414"
                     /coded_by="XM_041085478.1:203..4732"
                     /db_xref="GeneID:107894414"
ORIGIN      
        1 mglermdvgv kvrkfivisv rtcykfvcsh pflvglacfl iflyrsfpll fsflvtaspv
       61 lvctavllgt llsfgspnip eidkheeenv shevsplktg vseddtvvkr dfndddfvve
      121 rhvgkrwdia enadekvslv dnevneveeg dgsvlykpli nddldsrdvh cengmiveve
      181 gllnhsllek mtgirgemle servlsmrra eesqhllaee vgdrnvelgd gkltsyiddv
      241 prgneldssl vsswkcvtgd edagdgdkdd ddnddddess dsgsdgaess spdasladis
      301 lmldelhpll gseaiqaaql srdgldsase sshgssddes desenkgege nneeeggakg
      361 dnedesksai kwteddqknl mdlgnlever nlrldkliar rrarksmrlm aeknlidldf
      421 adiplnlapi stsrgnpfdl pysyddlglp pipgsapsnl qprrnpfdlp ydsseekpdl
      481 kgdsfqeefs gfnqrgtnsq reaffsrhes fnvgssslgv prqelkwkpy fvpeqlvteg
      541 aspslfqrqs sevsesklss ipdsesvssv vdeednkpnk qdvsreteli lnedhvsvde
      601 qeshssdsdd vesmdvdqve nrdvhhdvve itlgdgeshl eiepvseaga tdhsehtase
      661 aenrdvhhdt vvitlgdvar atthvelnat eihprtepae edyssrssls slseidekis
      721 dvkgvvsagc eprdnelkes giskklsfee sefhftsgvv ddnqhtesif yssfhppsve
      781 tflsfstvss dkqaeisemg spsmlvesid ekheahgema eqgtssfqvm hggssdllng
      841 neprerdlpe iikhevtfag samvsstsad ynasmvpeyv veyvsrears ssdegleedv
      901 pnkeessiqn hvdllslgae ttlaidegmg evvdsspeeq qhqrhpness eaniweehkm
      961 esemdqtqap fsdsktntgc degvpsnssh qdlssresps sesekqllfd kdelpvdehd
     1021 kleepsiiat estrgadivn tdinvhevdd sedklsanfs lmtsgssslp seilehtlpm
     1081 dredlkekvl keienegpdd hfgyadvyap rvdeennnee vdeikeider ilseldtvgd
     1141 fnvgeiglpe rshvaytesa mladdmetet svglpvlear svedidlafk qlhegadfee
     1201 vilprmiknq pdhadtnsdl pvvevrsled ihnallqdpe pnlaqlphst dlrngsseve
     1261 qhvivsseei evsnavsgie egfdnaagep kneeeieelk tetnvelpvl earsvedidl
     1321 afkqlhegvd veevilpsmi enlpdhtdtt sefpvveais ldgihnafik gpepnpaelp
     1381 htadlrhgss eveqhdvvcs neievgqavs gfeehlqnva pgepkkeyee ieelkmetna
     1441 elpvldarsv edidlafkql hegvdveevv lasmiedqld heilrlssng imlqkvqnli
     1501 wpschfpqt
//
LOCUS       XP_040941413            1509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941413
VERSION     XP_040941413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085479.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1509
                     /product="uncharacterized protein"
                     /calculated_mol_wt=166730
     CDS             1..1509
                     /gene="LOC107894414"
                     /coded_by="XM_041085479.1:221..4750"
                     /db_xref="GeneID:107894414"
ORIGIN      
        1 mglermdvgv kvrkfivisv rtcykfvcsh pflvglacfl iflyrsfpll fsflvtaspv
       61 lvctavllgt llsfgspnip eidkheeenv shevsplktg vseddtvvkr dfndddfvve
      121 rhvgkrwdia enadekvslv dnevneveeg dgsvlykpli nddldsrdvh cengmiveve
      181 gllnhsllek mtgirgemle servlsmrra eesqhllaee vgdrnvelgd gkltsyiddv
      241 prgneldssl vsswkcvtgd edagdgdkdd ddnddddess dsgsdgaess spdasladis
      301 lmldelhpll gseaiqaaql srdgldsase sshgssddes desenkgege nneeeggakg
      361 dnedesksai kwteddqknl mdlgnlever nlrldkliar rrarksmrlm aeknlidldf
      421 adiplnlapi stsrgnpfdl pysyddlglp pipgsapsnl qprrnpfdlp ydsseekpdl
      481 kgdsfqeefs gfnqrgtnsq reaffsrhes fnvgssslgv prqelkwkpy fvpeqlvteg
      541 aspslfqrqs sevsesklss ipdsesvssv vdeednkpnk qdvsreteli lnedhvsvde
      601 qeshssdsdd vesmdvdqve nrdvhhdvve itlgdgeshl eiepvseaga tdhsehtase
      661 aenrdvhhdt vvitlgdvar atthvelnat eihprtepae edyssrssls slseidekis
      721 dvkgvvsagc eprdnelkes giskklsfee sefhftsgvv ddnqhtesif yssfhppsve
      781 tflsfstvss dkqaeisemg spsmlvesid ekheahgema eqgtssfqvm hggssdllng
      841 neprerdlpe iikhevtfag samvsstsad ynasmvpeyv veyvsrears ssdegleedv
      901 pnkeessiqn hvdllslgae ttlaidegmg evvdsspeeq qhqrhpness eaniweehkm
      961 esemdqtqap fsdsktntgc degvpsnssh qdlssresps sesekqllfd kdelpvdehd
     1021 kleepsiiat estrgadivn tdinvhevdd sedklsanfs lmtsgssslp seilehtlpm
     1081 dredlkekvl keienegpdd hfgyadvyap rvdeennnee vdeikeider ilseldtvgd
     1141 fnvgeiglpe rshvaytesa mladdmetet svglpvlear svedidlafk qlhegadfee
     1201 vilprmiknq pdhadtnsdl pvvevrsled ihnallqdpe pnlaqlphst dlrngsseve
     1261 qhvivsseei evsnavsgie egfdnaagep kneeeieelk tetnvelpvl earsvedidl
     1321 afkqlhegvd veevilpsmi enlpdhtdtt sefpvveais ldgihnafik gpepnpaelp
     1381 htadlrhgss eveqhdvvcs neievgqavs gfeehlqnva pgepkkeyee ieelkmetna
     1441 elpvldarsv edidlafkql hegvdveevv lasmiedqld heilrlssng imlqkvqnli
     1501 wpschfpqt
//
LOCUS       XP_016673534             324 aa            linear   PLN 06-AUG-2024
DEFINITION  ELMO domain-containing protein C [Gossypium hirsutum].
ACCESSION   XP_016673534
VERSION     XP_016673534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="ELMO domain-containing protein C"
                     /calculated_mol_wt=37284
     Region          128..294
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..324
                     /gene="LOC107893123"
                     /coded_by="XM_016818045.2:264..1238"
                     /db_xref="GeneID:107893123"
ORIGIN      
        1 mrsgtgigtv rrrlhhsdvg cirsenyets gldgldepll gkrdyddkhs egrvmeeiwd
       61 derkkeqlhw tllfsnliaq waqwianlvf gsgsfivrhi pllsntknrs npklivptls
      121 plqeerlrnl qqrlgvpfdg srvdhqdalk llwrlaypdr elpplkselw kdmgwqgpdp
      181 stdfrgggfi slenliffak kypesfqrll hkqdgnradw eypfavagin isfmltqmld
      241 lqsgkpssla girflkllge demalddlyc vafqmmdaqw lvkrasymef ndvlkstrtq
      301 lerelsledv stvkdlpayn llrr
//
LOCUS       XP_016673535             342 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GrpE [Gossypium hirsutum].
ACCESSION   XP_016673535
VERSION     XP_016673535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="protein GrpE"
                     /calculated_mol_wt=37710
     Region          84..319
                     /region_name="GrpE"
                     /note="nucleotide exchange factor GrpE; cl03075"
                     /db_xref="CDD:446000"
     Region          166..213
                     /region_name="2-helical coiled coil"
                     /note="2-helical coiled coil [structural motif]"
                     /db_xref="CDD:271355"
     Site            order(168..169,172..173,175..176,179..181,183,186..187,
                     190..191,194..195,197..198,201..203,205..209,211..212,
                     229..230,232..234,237,243..244)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271355"
     Site            order(181,189,211,214,256,258..259,261..265,281,290,294,
                     296,299)
                     /site_type="other"
                     /note="Hsp70 (ATPase domain) interactions [polypeptide
                     binding]"
                     /db_xref="CDD:271355"
     Region          229..244
                     /region_name="2-helical coiled coil"
                     /note="2-helical coiled coil [structural motif]"
                     /db_xref="CDD:271355"
     CDS             1..342
                     /gene="LOC107893124"
                     /coded_by="XM_016818046.2:230..1258"
                     /db_xref="GeneID:107893124"
ORIGIN      
        1 mavllktlsf kstplpplsp slrpislnsp rpfyvcfkqr lprtpgalrf spspslrfvk
       61 lvpfasngge tetaetqeev eepqiedssd gavsveedtt gdesndfedt psptivsllq
      121 tykealasnd eskvadieaf lnsiedekvd lekkmaslse elsiekervl risadfdnfr
      181 krtererlsl vsntqgevle nllpvldnfe rakaqikfet egeekisnsy qsiykqfmei
      241 lsslgvepve tvgnlfdpml heaimredst efeegiilqe frkgfklger llrpsmvkvs
      301 agpgpakpeq gespestekg esneggessg ssetdpgtae ts
//
LOCUS       XP_016675481             396 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At5g07610 [Gossypium hirsutum].
ACCESSION   XP_016675481
VERSION     XP_016675481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819992.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..396
                     /product="F-box protein At5g07610"
                     /calculated_mol_wt=45506
     Region          17..51
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(19,22..23,26..27,31,33..34,38..40,42)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          107..>226
                     /region_name="F_box_assoc_1"
                     /note="F-box protein interaction domain; TIGR01640"
                     /db_xref="CDD:273726"
     CDS             1..396
                     /gene="LOC107894770"
                     /coded_by="XM_016819992.2:110..1300"
                     /db_xref="GeneID:107894770"
ORIGIN      
        1 mnpklmissa ekignnqdll aqillrlpak slikfkcvsk qwlslisnpq fclshtrhqg
       61 degflhptal llkvqyivsp efdvvplkhf sqvpffdyis tsglnilqsc nglfvceald
      121 ddlnvsgyfi cnpttkqfkk lsflqnpikd cefyvslafd plqsphykii vvrevlensf
      181 ifeldiyase sdswkiatti fetkeeacma fedavfcngk lhwnsygnqs lyldvekecl
      241 qmmpmptklr gnhrleiyry fgesggrlyl avtyhafidl dlyvhqmasd yshwflkhrl
      301 nvgdamkvfp elnlgchpfk sgfsgvsfvg serkeeakvv iwtdgkiicy dfndgawkmm
      361 hdpgpglkig tpfedfnhlh eqrfipykyf esvyvf
//
LOCUS       XP_016673537             297 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB60 [Gossypium hirsutum].
ACCESSION   XP_016673537
VERSION     XP_016673537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..297
                     /product="transcription factor MYB60"
                     /calculated_mol_wt=32985
     Region          5..>162
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..297
                     /gene="LOC107893127"
                     /coded_by="XM_016818048.2:125..1018"
                     /db_xref="GeneID:107893127"
ORIGIN      
        1 mgrppccdkv gikkgpwtpe ediilvsyiq ehgpgnwrsv ptntglmrcs kscrlrwtny
       61 lrpgikrgnf tpheegmiih lqallgnkwa aiasylpqrt dngiknywnt hlkkklrkfq
      121 sameppsmag deksldfaes etgagssnlk lnqtsssyas stenisrllq gwmrsspkin
      181 nnnnnsdsig scsaaanndl ishgddqles ilsfenmkdv almekstska tfqdsgekii
      241 npertqkadn nnnniddnnn nnsnpplsfl ekwlldesss aaqveeidqm melpsif
//
LOCUS       XP_040941414             484 aa            linear   PLN 06-AUG-2024
DEFINITION  probable arabinosyltransferase ARAD1 [Gossypium hirsutum].
ACCESSION   XP_040941414
VERSION     XP_040941414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085480.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="probable arabinosyltransferase ARAD1"
                     /calculated_mol_wt=55453
     Region          95..410
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..484
                     /gene="LOC107893128"
                     /coded_by="XM_041085480.1:89..1543"
                     /db_xref="GeneID:107893128"
ORIGIN      
        1 maekrgssit kiaflclfit ttmmfvlssr grpglfdhkt mpaeklltvf nngdsqtsnq
       61 snaessngsn railanseqq rvevggfqvt cngnlkeplk iflydldpef hfglldwkpq
      121 gnsvwpdirt kipsypggln sqhsieywlt ldllasefse npssreairv knsseadlif
      181 vpffsslsyn rysklsphqk ksknwelqek lvkfvmgqke wkisggrnhv vlahhpnsml
      241 narmqlwpai filsdfgryp invanldkdv iapykhviks yvndssdfds rktllyfqga
      301 iyrknggfar qelyyllkde kdvhfsfgsv qrngirqasq gmhsskfcln iagdtpssnr
      361 lfdaiashcv pviisdeiel pyedildyte fcifirtsda vkkgflinri rsitkdkwtq
      421 mweklkqvep lfefqypske gdavqmiwqs lshkvssvkm kinkskrysr fvprkrrglr
      481 trtk
//
LOCUS       XP_040941415             484 aa            linear   PLN 06-AUG-2024
DEFINITION  probable arabinosyltransferase ARAD1 [Gossypium hirsutum].
ACCESSION   XP_040941415
VERSION     XP_040941415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085481.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="probable arabinosyltransferase ARAD1"
                     /calculated_mol_wt=55453
     Region          95..410
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..484
                     /gene="LOC107893128"
                     /coded_by="XM_041085481.1:440..1894"
                     /db_xref="GeneID:107893128"
ORIGIN      
        1 maekrgssit kiaflclfit ttmmfvlssr grpglfdhkt mpaeklltvf nngdsqtsnq
       61 snaessngsn railanseqq rvevggfqvt cngnlkeplk iflydldpef hfglldwkpq
      121 gnsvwpdirt kipsypggln sqhsieywlt ldllasefse npssreairv knsseadlif
      181 vpffsslsyn rysklsphqk ksknwelqek lvkfvmgqke wkisggrnhv vlahhpnsml
      241 narmqlwpai filsdfgryp invanldkdv iapykhviks yvndssdfds rktllyfqga
      301 iyrknggfar qelyyllkde kdvhfsfgsv qrngirqasq gmhsskfcln iagdtpssnr
      361 lfdaiashcv pviisdeiel pyedildyte fcifirtsda vkkgflinri rsitkdkwtq
      421 mweklkqvep lfefqypske gdavqmiwqs lshkvssvkm kinkskrysr fvprkrrglr
      481 trtk
//
LOCUS       XP_016673540             244 aa            linear   PLN 06-AUG-2024
DEFINITION  WUSCHEL-related homeobox 11 [Gossypium hirsutum].
ACCESSION   XP_016673540
VERSION     XP_016673540.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818051.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="WUSCHEL-related homeobox 11"
                     /calculated_mol_wt=26596
     Region          22..75
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..244
                     /gene="LOC107893130"
                     /coded_by="XM_016818051.2:96..830"
                     /db_xref="GeneID:107893130"
ORIGIN      
        1 medngpdhns pshvsersep vrsrwtpkpe qililesifn sgmvnpskde tvrirkllek
       61 fgsvgdanvf ywfqnrrsrs rrrqrqlqas laagseqrnn npqaqavygg gaiqydssga
      121 aaaaamgfap ppfhvgssss cgvmgddgfe nllsmsaqmg fqelrqsssv setsnlhyqt
      181 gfitvfingv ptevprgpld vkamfgedvd lvhssgvpip inefgfllqt lqhgesyflv
      241 srvt
//
LOCUS       XP_040941416             244 aa            linear   PLN 06-AUG-2024
DEFINITION  WUSCHEL-related homeobox 11 [Gossypium hirsutum].
ACCESSION   XP_040941416
VERSION     XP_040941416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085482.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="WUSCHEL-related homeobox 11"
                     /calculated_mol_wt=26596
     Region          22..75
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..244
                     /gene="LOC107893130"
                     /coded_by="XM_041085482.1:96..830"
                     /db_xref="GeneID:107893130"
ORIGIN      
        1 medngpdhns pshvsersep vrsrwtpkpe qililesifn sgmvnpskde tvrirkllek
       61 fgsvgdanvf ywfqnrrsrs rrrqrqlqas laagseqrnn npqaqavygg gaiqydssga
      121 aaaaamgfap ppfhvgssss cgvmgddgfe nllsmsaqmg fqelrqsssv setsnlhyqt
      181 gfitvfingv ptevprgpld vkamfgedvd lvhssgvpip inefgfllqt lqhgesyflv
      241 srvt
//
LOCUS       XP_016673541             604 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor IIIB 90 kDa subunit isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673541
VERSION     XP_016673541.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818052.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..604
                     /product="transcription factor IIIB 90 kDa subunit isoform
                     X1"
                     /calculated_mol_wt=67744
     Region          69..161
                     /region_name="CYCLIN_TFIIIB90_rpt1"
                     /note="first cyclin box found in transcription factor IIIB
                     90 kDa subunit (TFIIIB90) and similar proteins; cd20553"
                     /db_xref="CDD:410256"
     Site            order(69,111..114,148,152,155..156)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410256"
     Region          171..261
                     /region_name="CYCLIN_TFIIIB90_rpt2"
                     /note="second cyclin box found in transcription factor
                     IIIB 90 kDa subunit (TFIIIB90) and similar proteins;
                     cd20554"
                     /db_xref="CDD:410257"
     Site            order(213..215,246..247,249..250)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410257"
     Region          407..531
                     /region_name="BRF1"
                     /note="Brf1-like TBP-binding domain; pfam07741"
                     /db_xref="CDD:462250"
     CDS             1..604
                     /gene="LOC107893131"
                     /coded_by="XM_016818052.2:448..2262"
                     /db_xref="GeneID:107893131"
ORIGIN      
        1 mvycnncsrn vsgerldegl lscsfcgkvl eeynfatepq fvkdsagqsk lsgnfvrsvq
       61 aisdsrrrtl dyaseqmsgm knalqiddys ddvvhtarrf yeiglernft rgrrselvqa
      121 aclylacrqk rkpfllidfa hylkinvyel gsvylqlcyv lyladgkdlq klidpsifih
      181 kfttalipeg ndevvktard ilasmkrdwm qtgrkpsglc gaalyisals hglkfpksei
      241 ikhvyiceat lskrliefen tnagaltmee ftekerelrt ssltrkqpnt gsketsldev
      301 lcrhkerkpf ayglcnecye efmkvsggld ggsdppafqr aekerlakls ieenaksiss
      361 ctsasgsekp encgaledat nkeaidegdn dklpgvdgsd desdnfsdid dfevdgylhn
      421 eeekrfkkii weeinreyle eqaakeaaaa aakeacmany dkcpedlqaa qelaaaaaev
      481 vakskkerlq kraaeaknag paktaaeatr qmlvkkrlss kinydalekl fdepvateks
      541 kkqrigsnsd ekeqkaskig kdegdydegd eedggiyddn pefdkqvydy ddndydygyd
      601 ydgy
//
LOCUS       XP_016673542             600 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor IIIB 90 kDa subunit isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673542
VERSION     XP_016673542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818053.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..600
                     /product="transcription factor IIIB 90 kDa subunit isoform
                     X2"
                     /calculated_mol_wt=67349
     Region          69..161
                     /region_name="CYCLIN_TFIIIB90_rpt1"
                     /note="first cyclin box found in transcription factor IIIB
                     90 kDa subunit (TFIIIB90) and similar proteins; cd20553"
                     /db_xref="CDD:410256"
     Site            order(69,111..114,148,152,155..156)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410256"
     Region          171..257
                     /region_name="CYCLIN_TFIIIB90_rpt2"
                     /note="second cyclin box found in transcription factor
                     IIIB 90 kDa subunit (TFIIIB90) and similar proteins;
                     cd20554"
                     /db_xref="CDD:410257"
     Site            order(209..211,242..243,245..246)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410257"
     Region          403..527
                     /region_name="BRF1"
                     /note="Brf1-like TBP-binding domain; pfam07741"
                     /db_xref="CDD:462250"
     CDS             1..600
                     /gene="LOC107893131"
                     /coded_by="XM_016818053.2:348..2150"
                     /db_xref="GeneID:107893131"
ORIGIN      
        1 mvycnncsrn vsgerldegl lscsfcgkvl eeynfatepq fvkdsagqsk lsgnfvrsvq
       61 aisdsrrrtl dyaseqmsgm knalqiddys ddvvhtarrf yeiglernft rgrrselvqa
      121 aclylacrqk rkpfllidfa hylkinvyel gsvylqlcyv lyladgkdlq klidpsifih
      181 kfttegndev vktardilas mkrdwmqtgr kpsglcgaal yisalshglk fpkseiikhv
      241 yiceatlskr liefentnag altmeeftek erelrtsslt rkqpntgske tsldevlcrh
      301 kerkpfaygl cnecyeefmk vsggldggsd ppafqraeke rlaklsieen aksissctsa
      361 sgsekpencg aledatnkea idegdndklp gvdgsddesd nfsdiddfev dgylhneeek
      421 rfkkiiweei nreyleeqaa keaaaaaake acmanydkcp edlqaaqela aaaaevvaks
      481 kkerlqkraa eaknagpakt aaeatrqmlv kkrlsskiny daleklfdep vatekskkqr
      541 igsnsdekeq kaskigkdeg dydegdeedg giyddnpefd kqvydyddnd ydygydydgy
//
LOCUS       XP_016673543             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673543
VERSION     XP_016673543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..168
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17502
     Region          <70..>163
                     /region_name="PRK14291"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:237661"
     CDS             1..168
                     /gene="LOC107893134"
                     /coded_by="XM_016818054.2:243..749"
                     /db_xref="GeneID:107893134"
ORIGIN      
        1 melalnissp tifpinstpk lkkvhkisyg fgsngyypis kicavcsngs vsssssshga
       61 earavgdahr rrssleslfc ydkpipeeri eepvgvslae klvgdnprct dcqakgavlc
      121 ttcsgsglyv dsilesqgii vkvrclgcgg sgnimclecg grghlgse
//
LOCUS       XP_016673545             568 aa            linear   PLN 06-AUG-2024
DEFINITION  cation/calcium exchanger 2 [Gossypium hirsutum].
ACCESSION   XP_016673545
VERSION     XP_016673545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818056.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..568
                     /product="cation/calcium exchanger 2"
                     /calculated_mol_wt=62422
     Region          36..568
                     /region_name="PLN03151"
                     /note="cation/calcium exchanger; Provisional"
                     /db_xref="CDD:215604"
     CDS             1..568
                     /gene="LOC107893136"
                     /coded_by="XM_016818056.2:333..2039"
                     /db_xref="GeneID:107893136"
ORIGIN      
        1 mgtwvlqyqn krcilifmni sfllvasvfl mmcsspsqvv lgsngskfrn sqqdckaled
       61 lddykakcsy lksnnnpcvy qgyvdylyhf ycnfgrfpvl glclliawli vlfyllgnta
      121 seyfcysles lssllklspt lagvtllslg ngapdvfssv vsfmdsatqd vglntvlggv
      181 ffvtsivvgt igtfvhrkrv avnkpafvrd vcylllvlvs lililimgei nlwgamafss
      241 myivyvilvy iiyivwnsgg rditdsdssy nsglnipiln gidkmeivyl eegdvkdvkv
      301 defkncclcl risdtwsvll wvlemplylp rrltipiacq erwskpvavv svtlapills
      361 vlwdlqddnl tfktglvvyg igvlfgislg flaylrteks nppktclfpw laggflmsvv
      421 wsyiiaqelv gllislghil gisqsilgft vlawgnslgd ivtnltmaln ggpegvqvai
      481 sgcyagpifn tlfglgmslv gsawygypsp vqipedpyll etlgflvaal lwallvlpmr
      541 nmkldgvlgg glfliyftsm slrvieal
//
LOCUS       XP_040941417             354 aa            linear   PLN 06-AUG-2024
DEFINITION  replication factor C subunit 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941417
VERSION     XP_040941417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085483.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..354
                     /product="replication factor C subunit 3 isoform X1"
                     /calculated_mol_wt=40546
     Region          2..347
                     /region_name="rfc"
                     /note="replication factor C small subunit; Reviewed;
                     PRK00440"
                     /db_xref="CDD:234763"
     CDS             1..354
                     /gene="LOC121212533"
                     /coded_by="XM_041085483.1:104..1168"
                     /db_xref="GeneID:121212533"
ORIGIN      
        1 mlwvdkyrpk tldqamvhqe ialnlkklva eqdcphllfy gpsgsgkktl imallrqifg
       61 psaekvkven knwkidagsr tidleltmls sanhvelsps dagfqdryiv qeiikemakn
      121 rpidtkgkkg ykvlilnevd klsreaqhsl rrtmekysas crlilccnss skvteairsr
      181 clnirinaps eeqiikvief igkkeglqlp sgfaariaek snrslrrail sfetcrvqqh
      241 pftsnqailp mdweeyisei atdimkeqsp krlfevrgkv yellincipp eiilkrllhe
      301 llkkldaelk hevchwaayy ehrmrlgqka ifhieafvak fmsiykafli atfg
//
LOCUS       XP_040941418             303 aa            linear   PLN 06-AUG-2024
DEFINITION  replication factor C subunit 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941418
VERSION     XP_040941418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085484.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..303
                     /product="replication factor C subunit 3 isoform X2"
                     /calculated_mol_wt=34738
     Region          <42..296
                     /region_name="rfc"
                     /note="replication factor C small subunit; Reviewed;
                     PRK00440"
                     /db_xref="CDD:234763"
     CDS             1..303
                     /gene="LOC121212533"
                     /coded_by="XM_041085484.1:252..1163"
                     /db_xref="GeneID:121212533"
ORIGIN      
        1 mallrqifgp saekvkvenk nwkidagsrt idleltmlss anhvelspsd agfqdryivq
       61 eiikemaknr pidtkgkkgy kvlilnevdk lsreaqhslr rtmekysasc rlilccnsss
      121 kvteairsrc lnirinapse eqiikviefi gkkeglqlps gfaariaeks nrslrrails
      181 fetcrvqqhp ftsnqailpm dweeyiseia tdimkeqspk rlfevrgkvy ellincippe
      241 iilkrllhel lkkldaelkh evchwaayye hrmrlgqkai fhieafvakf msiykaflia
      301 tfg
//
LOCUS       XP_040941419             642 aa            linear   PLN 06-AUG-2024
DEFINITION  cationic amino acid transporter 2, vacuolar isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941419
VERSION     XP_040941419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085485.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..642
                     /product="cationic amino acid transporter 2, vacuolar
                     isoform X1"
                     /calculated_mol_wt=68297
     Region          22..618
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..642
                     /gene="LOC121212534"
                     /coded_by="XM_041085485.1:279..2207"
                     /db_xref="GeneID:121212534"
ORIGIN      
        1 mgvlvdsqke gfgsswgglk nlvrrkqvdc ahtkrldnhq lakeltiphl iavgvgstig
       61 agvyilvgav ardhsgpalt mcfliagiaa alsafcyael aslcpsagsa yhysyicvge
      121 gvawlvgwal ileytiggsa vargifpnla llfggenslp tflarqhfpg ldvmvdpcaa
      181 alvlivtgfl clgikesala qgiatavnvf amlfviiagg ylgfktgwtg yevptgyfpf
      241 gvdgmlagsa tvffsyigfd tvastaeeak npkrdlplgi alslsicccl ymlvsivivg
      301 lvpyyamdpd tpissafasn gmqwaayiit vgavtalist lmgsilpqpr ilmamardgl
      361 lpsffldvnk htqvpvnstl atgivasila ffmdvsqlag mvsvgtllaf tmvavsvlil
      421 ryvppdevpl plslqesids yklrhnsdaq mingenpaks pgdpclpllg eknvavdctv
      481 veklealssf tagtldeenr rkiagwtiml icvgafmltf aasnlwfssl irftlcgagg
      541 llllsglvil tcidqdderh nfghaggfic pfvpllpisc ilinvyllin levatwvrvs
      601 vwlmvgvliy ifygrrhssl lnaiyvpkah vdeiyrssga il
//
LOCUS       XP_040941420             639 aa            linear   PLN 06-AUG-2024
DEFINITION  cationic amino acid transporter 2, vacuolar isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941420
VERSION     XP_040941420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085486.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..639
                     /product="cationic amino acid transporter 2, vacuolar
                     isoform X2"
                     /calculated_mol_wt=68023
     Region          22..615
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..639
                     /gene="LOC121212534"
                     /coded_by="XM_041085486.1:280..2199"
                     /db_xref="GeneID:121212534"
ORIGIN      
        1 mgvlvdsqke gfgsswgglk nlvrrkqvdc ahtkrldnhq lakeltiphl iavgvgstig
       61 agvyilvgav ardhsgpalt mcfliagiaa alsafcyael aslcpsagsa yhysyicvge
      121 gvawlvgwal ileytiggsa vargifpnla llfggenslp tflarqhfpg ldvmvdpcaa
      181 alvlivtgfl clgikesala qgiatavnvf amlfviiagg ylgfktgwtg yevptgyfpf
      241 gvdgmlagsa tvffsyigfd tvastaeeak npkrdlplgi alslsicccl ymlvsivivg
      301 lvpyyamdpd tpissafasn gmqwaayiit vgavtalist lmgsilpqpr ilmamardgl
      361 lpsffldvnk htqvpvnstl atgivasila ffmdvsqlag mvsvgtllaf tmvavsvlil
      421 ryvppdevpl plslqesids yklrhnsdaq mingenpaks pgdpclpllg eknvavdctv
      481 veklealssc tldeenrrki agwtimlicv gafmltfaas nlwfsslirf tlcgagglll
      541 lsglviltci dqdderhnfg haggficpfv pllpiscili nvyllinlev atwvrvsvwl
      601 mvgvliyify grrhssllna iyvpkahvde iyrssgail
//
LOCUS       XP_040941421             507 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941421
VERSION     XP_040941421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085487.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..507
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57141
     Region          160..419
                     /region_name="NEMP"
                     /note="NEMP family; pfam10225"
                     /db_xref="CDD:463008"
     CDS             1..507
                     /gene="LOC107893140"
                     /coded_by="XM_041085487.1:79..1602"
                     /db_xref="GeneID:107893140"
ORIGIN      
        1 maisssstsi lffflifvll ltcfsryhrl qrvgfkwtgi dfasptidvt ptplsgyssv
       61 rgskyvllcd rvhvsghsrl klgsyanffr vtlapsvlip erlhskiqvc fhrnaslglc
      121 kcgdgdwkpl qkgiwhtams pyddryidvk figdmsgsvt valeedfqlw rliflvlgfv
      181 llllapfvsk wvpfyysssm algvllvvii llyqgmkllp tgrkstfyft mygsmllgag
      241 sfllnqfsvl vnsilvnfgl seemhnpvai fafvgivlsg aglgywtark fvilkdgsvd
      301 vgvaqfvkwa mriisilfif qstvdsrlav valascsaic slntskirkg ymqpqysrdq
      361 spwlhhsrqr tlmpgraefl srsprvdsnq kmrnspktap awtnslvkgy yaklgegaid
      421 hqdyystfhk tnhqkkfteq ewedfsqest rqamaelaas peftdwmieh adrikllprd
      481 dssdesvgsk sssddedees hswfrlf
//
LOCUS       XP_016673551             797 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive leucine-rich repeat receptor-like protein kinase
            At3g03770 [Gossypium hirsutum].
ACCESSION   XP_016673551
VERSION     XP_016673551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818062.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..797
                     /product="probable inactive leucine-rich repeat
                     receptor-like protein kinase At3g03770"
                     /calculated_mol_wt=88048
     Region          <92..766
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          122..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          146..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          170..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          194..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          241..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          286..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          496..759
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(496..499,502,504,516,518,547,570..573,622,626..627,
                     629,639..640)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..797
                     /gene="LOC107893142"
                     /coded_by="XM_016818062.2:1060..3453"
                     /db_xref="GeneID:107893142"
ORIGIN      
        1 mlsafplvlv lyilpmakgf kyqafvvlgi illlidqseq lqssqthtll rlqlllnypd
       61 vlsswnnsvd fcnaeptsqv tvvcyeesit qlhvigndgt pslpsnfsmd sfvttlvklp
      121 dlrvltlvsl glwgplpgki arlssleiln mtsnllygti phelsdvttl qtlilddnmf
      181 sgwlpewlgs fpvlavlslr nnsfngslpd sfsilenlrv lalshnhfqg elpdlssltn
      241 lqeldledna fgpqfprlgn klirlvlgkn rfrsaiptel nsfyqlqwld lsfnrfvgpf
      301 pssllslpsi tylniadnkl tgmlfentsc nvelkfadls snlltgllps clsdskdrvf
      361 lyaqnclatg kenqhplpfc rnealavgil phskkskpsk falafgitgg iiggivllgl
      421 ififvrrlna yktinkpttr lisekasiay tskllsdary isqtmklgal glppyrtfal
      481 eeledatnnf dttafmgegs qgqmyrgrlk dgtfvaircl kmkkshstqs fmhhielisk
      541 lryrhlvsal ghcfvcyldd ssvsriflif eyvpngtlrs wiseghagrs ltwpqrisaa
      601 igitkgiqfl htgimpgvys nnlkitnvlm dqslvakiss ynlpllaesa gkvdhrtsal
      661 pkdsssrtra syedkadvyd fgvillemil grpskaksev eilknqllav vatddatrrs
      721 iadpavqtsc sdqslktmme icvrcllkdp aerpsvedvm wnlqfaaqvq dawrgdsrss
      781 spggspsqpa nlpvafh
//
LOCUS       XP_040941422             925 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RRP6-like 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941422
VERSION     XP_040941422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085488.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..925
                     /product="protein RRP6-like 2 isoform X1"
                     /calculated_mol_wt=103494
     Region          <65..128
                     /region_name="PMC2NT"
                     /note="PMC2NT (NUC016) domain; pfam08066"
                     /db_xref="CDD:462352"
     Region          270..462
                     /region_name="Rrp6p_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of yeast Rrp6p,
                     human polymyositis/scleroderma autoantigen 100kDa, and
                     similar proteins; cd06147"
                     /db_xref="CDD:99850"
     Site            order(299..302,353..354,356..358,389..390,423,427)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99850"
     Site            order(299,301,358,423,427)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99850"
     Site            order(300..302,353..354,356..357,389..390,423,427)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99850"
     Region          496..563
                     /region_name="HRDC"
                     /note="HRDC domain; pfam00570"
                     /db_xref="CDD:425755"
     CDS             1..925
                     /gene="LOC107893143"
                     /coded_by="XM_041085488.1:139..2916"
                     /db_xref="GeneID:107893143"
ORIGIN      
        1 mnndndpiam eaqsepskna qslqtlasgp lssslsslas ssrtlpsnqg fhffnnfddf
       61 rlpidriakt sdsllqfigs ssktwdpnna ihfpnnidri tddetyrwlv dmnddileqf
      121 dvsvdefqvk eektgrffgs dldnngfqlv qgkkkkkgds glisdsvces lsgkeggssn
      181 scsgakvkkg altmvttgka kfpfhvptir kpqeeynilv dnsnqpfehv wlqrsedglr
      241 fvhpleklsv mdfvdkdian lepirppsie stpfklveev kdlkelaakl rnvdefavdl
      301 ehnqyrsfqg ltclmqistr tedfivdtlk lrihigpylr evfkdpmkkk vmhgsdkdil
      361 wlqrdfgiyl cnlfdtgqas kvlklernsl khllqhycgv tankeyqnad wrvrplpdem
      421 lryaredthy llyiydlmri kllsmpkeai hfdaplvevy krssdvcmql yekellmens
      481 ylhiyglqga gfnaeqlaiv aalcewrdii araedestgy vlpnkvllei akqmpvtask
      541 lrrllkskhp yvernigtvv siirqsmqns vvfeaaaqql rmghllnasg ehvavnegae
      601 alppetptds kiaidtteii dggmwgpdkr tahpastqhr aellkigssi sgpdmvknqt
      661 rlsfepdiml msareresit isglsgeana wpvislsaki atgatvpvlk kpshgfgsll
      721 gnaatkkksd vdkmkeegkl eqirssvdls fhsfsgtkeq pepatkdttr slevsrpeep
      781 ptiettestl eniillednl nkketnngns spedetmsls elstifqqcl qsindqnrnv
      841 vkvekpkeai dvpqmkafdy eaamkevkfg eeivgeesgn qsnsagkkks saidrlqidd
      901 gtkqfpqarr raafpasgnr natfr
//
LOCUS       XP_016673552             925 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RRP6-like 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673552
VERSION     XP_016673552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..925
                     /product="protein RRP6-like 2 isoform X1"
                     /calculated_mol_wt=103494
     Region          <65..128
                     /region_name="PMC2NT"
                     /note="PMC2NT (NUC016) domain; pfam08066"
                     /db_xref="CDD:462352"
     Region          270..462
                     /region_name="Rrp6p_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of yeast Rrp6p,
                     human polymyositis/scleroderma autoantigen 100kDa, and
                     similar proteins; cd06147"
                     /db_xref="CDD:99850"
     Site            order(299..302,353..354,356..358,389..390,423,427)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99850"
     Site            order(299,301,358,423,427)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99850"
     Site            order(300..302,353..354,356..357,389..390,423,427)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99850"
     Region          496..563
                     /region_name="HRDC"
                     /note="HRDC domain; pfam00570"
                     /db_xref="CDD:425755"
     CDS             1..925
                     /gene="LOC107893143"
                     /coded_by="XM_016818063.2:149..2926"
                     /db_xref="GeneID:107893143"
ORIGIN      
        1 mnndndpiam eaqsepskna qslqtlasgp lssslsslas ssrtlpsnqg fhffnnfddf
       61 rlpidriakt sdsllqfigs ssktwdpnna ihfpnnidri tddetyrwlv dmnddileqf
      121 dvsvdefqvk eektgrffgs dldnngfqlv qgkkkkkgds glisdsvces lsgkeggssn
      181 scsgakvkkg altmvttgka kfpfhvptir kpqeeynilv dnsnqpfehv wlqrsedglr
      241 fvhpleklsv mdfvdkdian lepirppsie stpfklveev kdlkelaakl rnvdefavdl
      301 ehnqyrsfqg ltclmqistr tedfivdtlk lrihigpylr evfkdpmkkk vmhgsdkdil
      361 wlqrdfgiyl cnlfdtgqas kvlklernsl khllqhycgv tankeyqnad wrvrplpdem
      421 lryaredthy llyiydlmri kllsmpkeai hfdaplvevy krssdvcmql yekellmens
      481 ylhiyglqga gfnaeqlaiv aalcewrdii araedestgy vlpnkvllei akqmpvtask
      541 lrrllkskhp yvernigtvv siirqsmqns vvfeaaaqql rmghllnasg ehvavnegae
      601 alppetptds kiaidtteii dggmwgpdkr tahpastqhr aellkigssi sgpdmvknqt
      661 rlsfepdiml msareresit isglsgeana wpvislsaki atgatvpvlk kpshgfgsll
      721 gnaatkkksd vdkmkeegkl eqirssvdls fhsfsgtkeq pepatkdttr slevsrpeep
      781 ptiettestl eniillednl nkketnngns spedetmsls elstifqqcl qsindqnrnv
      841 vkvekpkeai dvpqmkafdy eaamkevkfg eeivgeesgn qsnsagkkks saidrlqidd
      901 gtkqfpqarr raafpasgnr natfr
//
LOCUS       XP_016673553             761 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RRP6-like 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673553
VERSION     XP_016673553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="protein RRP6-like 2 isoform X2"
                     /calculated_mol_wt=85495
     Region          <65..128
                     /region_name="PMC2NT"
                     /note="PMC2NT (NUC016) domain; pfam08066"
                     /db_xref="CDD:462352"
     Region          270..462
                     /region_name="Rrp6p_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of yeast Rrp6p,
                     human polymyositis/scleroderma autoantigen 100kDa, and
                     similar proteins; cd06147"
                     /db_xref="CDD:99850"
     Site            order(299..302,353..354,356..358,389..390,423,427)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99850"
     Site            order(299,301,358,423,427)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99850"
     Site            order(300..302,353..354,356..357,389..390,423,427)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99850"
     Region          496..563
                     /region_name="HRDC"
                     /note="HRDC domain; pfam00570"
                     /db_xref="CDD:425755"
     CDS             1..761
                     /gene="LOC107893143"
                     /coded_by="XM_016818064.2:140..2425"
                     /db_xref="GeneID:107893143"
ORIGIN      
        1 mnndndpiam eaqsepskna qslqtlasgp lssslsslas ssrtlpsnqg fhffnnfddf
       61 rlpidriakt sdsllqfigs ssktwdpnna ihfpnnidri tddetyrwlv dmnddileqf
      121 dvsvdefqvk eektgrffgs dldnngfqlv qgkkkkkgds glisdsvces lsgkeggssn
      181 scsgakvkkg altmvttgka kfpfhvptir kpqeeynilv dnsnqpfehv wlqrsedglr
      241 fvhpleklsv mdfvdkdian lepirppsie stpfklveev kdlkelaakl rnvdefavdl
      301 ehnqyrsfqg ltclmqistr tedfivdtlk lrihigpylr evfkdpmkkk vmhgsdkdil
      361 wlqrdfgiyl cnlfdtgqas kvlklernsl khllqhycgv tankeyqnad wrvrplpdem
      421 lryaredthy llyiydlmri kllsmpkeai hfdaplvevy krssdvcmql yekellmens
      481 ylhiyglqga gfnaeqlaiv aalcewrdii araedestgy vlpnkvllei akqmpvtask
      541 lrrllkskhp yvernigtvv siirqsmqns vvfeaaaqql rmghllnasg ehvavnegae
      601 alppetptds kiaidtteii dggmwgpdkr tahpastqhr aellkigssi sgpdmvknqt
      661 rlsfepdiml msareresit isglsgeana wpvislsaki atgatvpvlk kpshgfgsll
      721 gnaatkkksd vdkmvprssq nlqqriqldh wkfhdlknll p
//
LOCUS       XP_016673554             297 aa            linear   PLN 06-AUG-2024
DEFINITION  FH protein interacting protein FIP2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673554
VERSION     XP_016673554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818065.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..297
                     /product="FH protein interacting protein FIP2 isoform X1"
                     /calculated_mol_wt=32780
     Region          18..106
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          139..295
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..297
                     /gene="LOC107893144"
                     /coded_by="XM_016818065.2:108..1001"
                     /db_xref="GeneID:107893144"
ORIGIN      
        1 mifissflme dsnlptlvrl siggkkfctt idtltrrepd smlaavfssr htvyqdsekg
       61 yvfvdrdgkh frhilnwlrd gvvptltdse yselireaey yqllgliegv ssvlnkrked
      121 ekspaeltrt diikciqser vkfrgdlslv dfsfaclknv ffsranlqca kfrdvdavgs
      181 nfhnatlrec eftganlrga llaganlqsa nlqdaslidc sfcvadlrsa hlqsadltda
      241 nleganlega nlkgaklsna nlkganlqra ylrhvnlrdt hlegakldga nllgair
//
LOCUS       XP_016673556             256 aa            linear   PLN 06-AUG-2024
DEFINITION  FH protein interacting protein FIP2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673556
VERSION     XP_016673556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818067.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..256
                     /product="FH protein interacting protein FIP2 isoform X2"
                     /calculated_mol_wt=28167
     Region          18..106
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          104..254
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..256
                     /gene="LOC107893144"
                     /coded_by="XM_016818067.2:106..876"
                     /db_xref="GeneID:107893144"
ORIGIN      
        1 mifissflme dsnlptlvrl siggkkfctt idtltrrepd smlaavfssr htvyqdsekg
       61 yvfvdrdgkh frhilnwlrd gvvptltdse yselireaey yqlldlslvd fsfaclknvf
      121 fsranlqcak frdvdavgsn fhnatlrece ftganlrgal laganlqsan lqdaslidcs
      181 fcvadlrsah lqsadltdan leganlegan lkgaklsnan lkganlqray lrhvnlrdth
      241 legakldgan llgair
//
LOCUS       XP_016673559             256 aa            linear   PLN 06-AUG-2024
DEFINITION  FH protein interacting protein FIP2 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016673559
VERSION     XP_016673559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818070.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..256
                     /product="FH protein interacting protein FIP2 isoform X3"
                     /calculated_mol_wt=28164
     Region          <1..65
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          98..254
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..256
                     /gene="LOC107893144"
                     /coded_by="XM_016818070.2:240..1010"
                     /db_xref="GeneID:107893144"
ORIGIN      
        1 mlaavfssrh tvyqdsekgy vfvdrdgkhf rhilnwlrdg vvptltdsey selireaeyy
       61 qllgliegvs svlnkrkede kspaeltrtd iikciqserv kfrgdlslvd fsfaclknvf
      121 fsranlqcak frdvdavgsn fhnatlrece ftganlrgal laganlqsan lqdaslidcs
      181 fcvadlrsah lqsadltdan leganlegan lkgaklsnan lkganlqray lrhvnlrdth
      241 legakldgan llgair
//
LOCUS       XP_016673557             256 aa            linear   PLN 06-AUG-2024
DEFINITION  FH protein interacting protein FIP2 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016673557
VERSION     XP_016673557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..256
                     /product="FH protein interacting protein FIP2 isoform X3"
                     /calculated_mol_wt=28164
     Region          <1..65
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          98..254
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..256
                     /gene="LOC107893144"
                     /coded_by="XM_016818068.2:95..865"
                     /db_xref="GeneID:107893144"
ORIGIN      
        1 mlaavfssrh tvyqdsekgy vfvdrdgkhf rhilnwlrdg vvptltdsey selireaeyy
       61 qllgliegvs svlnkrkede kspaeltrtd iikciqserv kfrgdlslvd fsfaclknvf
      121 fsranlqcak frdvdavgsn fhnatlrece ftganlrgal laganlqsan lqdaslidcs
      181 fcvadlrsah lqsadltdan leganlegan lkgaklsnan lkganlqray lrhvnlrdth
      241 legakldgan llgair
//
LOCUS       XP_040941423             308 aa            linear   PLN 06-AUG-2024
DEFINITION  FH protein interacting protein FIP2 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941423
VERSION     XP_040941423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085489.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..308
                     /product="FH protein interacting protein FIP2 isoform X4"
                     /calculated_mol_wt=33921
     Region          18..106
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          139..306
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..308
                     /gene="LOC107893144"
                     /coded_by="XM_041085489.1:108..1034"
                     /db_xref="GeneID:107893144"
ORIGIN      
        1 mifissflme dsnlptlvrl siggkkfctt idtltrrepd smlaavfssr htvyqdsekg
       61 yvfvdrdgkh frhilnwlrd gvvptltdse yselireaey yqllgliegv ssvlnkrked
      121 ekspaeltrt diikciqser vkfrgvnlsg ldlskldlsl vdfsfaclkn vffsranlqc
      181 akfrdvdavg snfhnatlre ceftganlrg allaganlqs anlqdaslid csfcvadlrs
      241 ahlqsadltd anleganleg anlkgaklsn anlkganlqr aylrhvnlrd thlegakldg
      301 anllgair
//
LOCUS       XP_016673560             159 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SRC1 [Gossypium hirsutum].
ACCESSION   XP_016673560
VERSION     XP_016673560.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673560.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="protein SRC1"
                     /calculated_mol_wt=17403
     CDS             1..159
                     /gene="LOC107893147"
                     /coded_by="XM_016818071.2:79..558"
                     /db_xref="GeneID:107893147"
ORIGIN      
        1 mfshsyskqy qrnkartrkp drkmsgimhk ieetlhmggh kkeeekhkge ahhegghgyg
       61 aaehkgevhh egghgygyga aehkgevhhe gghgygaaaa aghghghgeq qkegfmdkik
      121 dkihgegghe hghegekkkk kekkkhedgh esssssdsd
//
LOCUS       XP_016673563             540 aa            linear   PLN 06-AUG-2024
DEFINITION  protein VAPYRIN [Gossypium hirsutum].
ACCESSION   XP_016673563
VERSION     XP_016673563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818074.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..540
                     /product="protein VAPYRIN"
                     /calculated_mol_wt=58669
     Region          4..121
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     Region          105..>228
                     /region_name="PTZ00322"
                     /note="6-phosphofructo-2-kinase/fructose-2,
                     6-biphosphatase; Provisional"
                     /db_xref="CDD:140343"
     Region          187..483
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(205,207,211..212,215..217,219..220,224,227,236,238,
                     240,244..245,248..250,252..253,257,260,269,271,273,
                     277..278,281..283,285..286,290,293,302)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          205..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          238..269
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          271..302
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          305..336
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          364..390
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(365..366,369..371,373..374,378,381,390,392,394,
                     398..399,402..404,406..407,411,414,423,425,427,431..432,
                     435..437,439..440,444,447)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          392..423
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          425..455
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          458..483
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..540
                     /gene="LOC107893150"
                     /coded_by="XM_016818074.2:238..1860"
                     /db_xref="GeneID:107893150"
ORIGIN      
        1 mdrlisleps nlvavrielg qkcfgeltlr nvmftmpvaf rlqpvnkgry tvkpqsgiiv
       61 plgtltveiv yhlppgsflp dsfpftddsf llhsvvvpga amkdstssyd avpnewfttr
      121 kkqvfidsgv kimfvgspvl vqlvmdgsmd eirevldrsd pswrpadsvd shgqsllhva
      181 iaqsrpdivq lllefepdie fqsrygstpl eaasgcgeel ivelllahka ipdrsesssr
      241 gpihlatigg yfevlrllll kganvdaltk dgntalhlav enrrrdctrl llangadpsv
      301 rntrdgdtal hvaaglgdeq mvklllqkgv nkdirnktgk taydvaaehg hmrlfdalkl
      361 gdnlclaark gevraiqrli engaaingrd qhgwtalhra sfkgrtdavk ilidkgidid
      421 srdedgytal hcavesghae vvellvkkga dvesrankgv kplqiadslh yvgisrilih
      481 ggatttggmp rvsampdsvp fgngkigkei etkkapmkrr ptkaravrgs fdrslplavi
//
LOCUS       XP_016673564             765 aa            linear   PLN 06-AUG-2024
DEFINITION  5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016673564
VERSION     XP_016673564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..765
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /calculated_mol_wt=84555
     Region          1..765
                     /region_name="PLN02475"
                     /note="5-methyltetrahydropteroyltriglutamate--homocysteine
                     methyltransferase"
                     /db_xref="CDD:215264"
     CDS             1..765
                     /gene="LOC107893151"
                     /coded_by="XM_016818075.2:153..2450"
                     /db_xref="GeneID:107893151"
ORIGIN      
        1 mashivgypr mgpkrelkfa lesfwdkkss aedlqkvaad lrssiwkqms dagikyipsn
       61 afsyydqvld atsmlgavpp rygwsggeig fdtyfsmarg nasvpamemt kwfdtnyhfi
      121 vpelgpdvnf syashkavde ykeakalgvn tvpvligpvs ylllskpakg vektfsllsl
      181 lpkilpiyke viselkaaga swiqfdeptl vldldshklq aftaayddle stlsglnvli
      241 etyfadltae ayktliglkg vtaygldlvr gaqtldlvks nfpkgkylfa gvvdgrniwa
      301 ndlaaslstl keleavvgke nlvvstscsl lhtavdlvne tklddeiksw lafaaqkvve
      361 vnalakalag qkdeaffsan aaaqasrkss prvtneavqk aaaalkgsdh rratnvsarl
      421 daqqkkldlp ilptttigsf pqtlelrrvr refkankise ddyikaikee ikkvvdlqee
      481 ldidvlvhge perndmveyf geqlsgfaft vngwvqsygs rcvkppiiyg dvsrpkpmtv
      541 fwsstaqsmt arpmkgmltg pvtilnwsfv rndqprfetc yqialaikde vedlekagin
      601 viqideaalr eglplrkseh afylkwavhs fritncgvqd ttqihthmcy snfndiihsi
      661 idmdadviti ensrsdekll svfregvkyg agigpgvydi hspripstee iadrinkmla
      721 vletnilwvn pdcglktrky aevkpalnnm vaaakllrtq lasak
//
LOCUS       XP_040941425             765 aa            linear   PLN 06-AUG-2024
DEFINITION  5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase [Gossypium hirsutum].
ACCESSION   XP_040941425
VERSION     XP_040941425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085491.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..765
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /calculated_mol_wt=84555
     Region          1..765
                     /region_name="PLN02475"
                     /note="5-methyltetrahydropteroyltriglutamate--homocysteine
                     methyltransferase"
                     /db_xref="CDD:215264"
     CDS             1..765
                     /gene="LOC107893151"
                     /coded_by="XM_041085491.1:799..3096"
                     /db_xref="GeneID:107893151"
ORIGIN      
        1 mashivgypr mgpkrelkfa lesfwdkkss aedlqkvaad lrssiwkqms dagikyipsn
       61 afsyydqvld atsmlgavpp rygwsggeig fdtyfsmarg nasvpamemt kwfdtnyhfi
      121 vpelgpdvnf syashkavde ykeakalgvn tvpvligpvs ylllskpakg vektfsllsl
      181 lpkilpiyke viselkaaga swiqfdeptl vldldshklq aftaayddle stlsglnvli
      241 etyfadltae ayktliglkg vtaygldlvr gaqtldlvks nfpkgkylfa gvvdgrniwa
      301 ndlaaslstl keleavvgke nlvvstscsl lhtavdlvne tklddeiksw lafaaqkvve
      361 vnalakalag qkdeaffsan aaaqasrkss prvtneavqk aaaalkgsdh rratnvsarl
      421 daqqkkldlp ilptttigsf pqtlelrrvr refkankise ddyikaikee ikkvvdlqee
      481 ldidvlvhge perndmveyf geqlsgfaft vngwvqsygs rcvkppiiyg dvsrpkpmtv
      541 fwsstaqsmt arpmkgmltg pvtilnwsfv rndqprfetc yqialaikde vedlekagin
      601 viqideaalr eglplrkseh afylkwavhs fritncgvqd ttqihthmcy snfndiihsi
      661 idmdadviti ensrsdekll svfregvkyg agigpgvydi hspripstee iadrinkmla
      721 vletnilwvn pdcglktrky aevkpalnnm vaaakllrtq lasak
//
LOCUS       XP_016673565             765 aa            linear   PLN 06-AUG-2024
DEFINITION  5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016673565
VERSION     XP_016673565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818076.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..765
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /calculated_mol_wt=84555
     Region          1..765
                     /region_name="PLN02475"
                     /note="5-methyltetrahydropteroyltriglutamate--homocysteine
                     methyltransferase"
                     /db_xref="CDD:215264"
     CDS             1..765
                     /gene="LOC107893151"
                     /coded_by="XM_016818076.2:613..2910"
                     /db_xref="GeneID:107893151"
ORIGIN      
        1 mashivgypr mgpkrelkfa lesfwdkkss aedlqkvaad lrssiwkqms dagikyipsn
       61 afsyydqvld atsmlgavpp rygwsggeig fdtyfsmarg nasvpamemt kwfdtnyhfi
      121 vpelgpdvnf syashkavde ykeakalgvn tvpvligpvs ylllskpakg vektfsllsl
      181 lpkilpiyke viselkaaga swiqfdeptl vldldshklq aftaayddle stlsglnvli
      241 etyfadltae ayktliglkg vtaygldlvr gaqtldlvks nfpkgkylfa gvvdgrniwa
      301 ndlaaslstl keleavvgke nlvvstscsl lhtavdlvne tklddeiksw lafaaqkvve
      361 vnalakalag qkdeaffsan aaaqasrkss prvtneavqk aaaalkgsdh rratnvsarl
      421 daqqkkldlp ilptttigsf pqtlelrrvr refkankise ddyikaikee ikkvvdlqee
      481 ldidvlvhge perndmveyf geqlsgfaft vngwvqsygs rcvkppiiyg dvsrpkpmtv
      541 fwsstaqsmt arpmkgmltg pvtilnwsfv rndqprfetc yqialaikde vedlekagin
      601 viqideaalr eglplrkseh afylkwavhs fritncgvqd ttqihthmcy snfndiihsi
      661 idmdadviti ensrsdekll svfregvkyg agigpgvydi hspripstee iadrinkmla
      721 vletnilwvn pdcglktrky aevkpalnnm vaaakllrtq lasak
//
LOCUS       XP_040941426             765 aa            linear   PLN 06-AUG-2024
DEFINITION  5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase [Gossypium hirsutum].
ACCESSION   XP_040941426
VERSION     XP_040941426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085492.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..765
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /calculated_mol_wt=84555
     Region          1..765
                     /region_name="PLN02475"
                     /note="5-methyltetrahydropteroyltriglutamate--homocysteine
                     methyltransferase"
                     /db_xref="CDD:215264"
     CDS             1..765
                     /gene="LOC107893151"
                     /coded_by="XM_041085492.1:73..2370"
                     /db_xref="GeneID:107893151"
ORIGIN      
        1 mashivgypr mgpkrelkfa lesfwdkkss aedlqkvaad lrssiwkqms dagikyipsn
       61 afsyydqvld atsmlgavpp rygwsggeig fdtyfsmarg nasvpamemt kwfdtnyhfi
      121 vpelgpdvnf syashkavde ykeakalgvn tvpvligpvs ylllskpakg vektfsllsl
      181 lpkilpiyke viselkaaga swiqfdeptl vldldshklq aftaayddle stlsglnvli
      241 etyfadltae ayktliglkg vtaygldlvr gaqtldlvks nfpkgkylfa gvvdgrniwa
      301 ndlaaslstl keleavvgke nlvvstscsl lhtavdlvne tklddeiksw lafaaqkvve
      361 vnalakalag qkdeaffsan aaaqasrkss prvtneavqk aaaalkgsdh rratnvsarl
      421 daqqkkldlp ilptttigsf pqtlelrrvr refkankise ddyikaikee ikkvvdlqee
      481 ldidvlvhge perndmveyf geqlsgfaft vngwvqsygs rcvkppiiyg dvsrpkpmtv
      541 fwsstaqsmt arpmkgmltg pvtilnwsfv rndqprfetc yqialaikde vedlekagin
      601 viqideaalr eglplrkseh afylkwavhs fritncgvqd ttqihthmcy snfndiihsi
      661 idmdadviti ensrsdekll svfregvkyg agigpgvydi hspripstee iadrinkmla
      721 vletnilwvn pdcglktrky aevkpalnnm vaaakllrtq lasak
//
LOCUS       XP_016673566             365 aa            linear   PLN 06-AUG-2024
DEFINITION  caffeic acid 3-O-methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016673566
VERSION     XP_016673566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818077.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..365
                     /product="caffeic acid 3-O-methyltransferase"
                     /calculated_mol_wt=40380
     Region          29..80
                     /region_name="dimerization"
                     /note="dimerization domain; pfam08100"
                     /db_xref="CDD:400439"
     Region          135..340
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..365
                     /gene="LOC107893152"
                     /coded_by="XM_016818077.2:189..1286"
                     /db_xref="GeneID:107893152"
ORIGIN      
        1 mmssqqsttk eeedclraiq yatstvlpfa lkaavdldlf eiiaksgsgs mvsaaeivsk
       61 lpaknpnape iidrilrflt vhsvldcklv tdedgnttrl ygiasigryf aknkdgisvv
      121 pilhltmdrh miecwnflke atlegglsfv rgfgvdifev aakdrnlant fnhsmsshta
      181 ivmnkalqiy kgfegltqvv dvgggwgtnl kliiskypri kginfdlpfv vkdapnipgv
      241 ehvggdmfnk vpnaevifmk wilhdwgdke clkllrncye aisecgkviv vesvlpelpt
      301 pnivtattlt ydvgmlhllp ggkertfkef etlfvqagfa afkpicrvyn ywviellknv
      361 nnspq
//
LOCUS       XP_016675482             144 aa            linear   PLN 06-AUG-2024
DEFINITION  16.6 kDa heat shock protein [Gossypium hirsutum].
ACCESSION   XP_016675482
VERSION     XP_016675482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819993.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..144
                     /product="16.6 kDa heat shock protein"
                     /calculated_mol_wt=16188
     Region          14..92
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(14..17,24,26,28..29,65,85..86)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..144
                     /gene="LOC107894772"
                     /coded_by="XM_016819993.1:98..532"
                     /db_xref="GeneID:107894772"
ORIGIN      
        1 meftyedfep fckwkrepns dtleihlpgf krqqlrvqls ssgnlvisge resdsdgkkr
       61 nrfrrefnvs neieanqiqa kffngilyvi mpmrstaaaa gvdvkastmn wnkrlameii
      121 vavssavavg vyvtkycqcs hlgs
//
LOCUS       XP_016741349             323 aa            linear   PLN 06-AUG-2024
DEFINITION  annexin D8 [Gossypium hirsutum].
ACCESSION   XP_016741349
VERSION     XP_016741349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="annexin D8"
                     /calculated_mol_wt=36489
     Region          17..>63
                     /region_name="Annexin"
                     /note="cl02574"
                     /db_xref="CDD:413385"
     Region          176..242
                     /region_name="Annexin"
                     /note="cl02574"
                     /db_xref="CDD:413385"
     Region          252..318
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..323
                     /gene="LOC107950995"
                     /coded_by="XM_016885860.2:147..1118"
                     /db_xref="GeneID:107950995"
ORIGIN      
        1 matkilasss hsfeneckei hesrgrwnhl iralvtrtql ecrgiretyk dmygedlitl
       61 lqksslrnqp gvspktcaal slwmlhpher daivareall qdndsnyqsl veifvgrkss
      121 hialikqayl skyktqldqd iiniepphpy qkilvalsts hkahqadinq htakcdarrl
      181 yetgegspga idegtvleif tkrsiphlkl tfscykhiyg hdytksitdv nsgeledalr
      241 mvvkcicnps nyyvkilfas ikgitadrga itrvmvsrse temdeiqrvf kakygvelre
      301 ticdsipsgd yrdfllalan ktv
//
LOCUS       XP_040941428             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941428
VERSION     XP_040941428.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085494.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11740
     CDS             1..107
                     /gene="LOC107935129"
                     /coded_by="XM_041085494.1:216..539"
                     /db_xref="GeneID:107935129"
ORIGIN      
        1 mpkerrfsap lgpdysngde eegsddvavg vsgvrgvegw wlargeakgs aagvavekik
       61 geetcsfdql rwnfkglrld dfnllhcifr emrfatstrs taisgrw
//
LOCUS       XP_016741350             383 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g16250 [Gossypium hirsutum].
ACCESSION   XP_016741350
VERSION     XP_016741350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885861.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="F-box/kelch-repeat protein At1g16250"
                     /calculated_mol_wt=43132
     Region          8..48
                     /region_name="F-box_AtAFR-like"
                     /note="F-box domain found in Arabidopsis thaliana protein
                     ATTENUATED FAR-RED RESPONSE (AtAFR) and similar proteins;
                     cd22152"
                     /db_xref="CDD:438923"
     Site            order(12,16,19..20,23..24,27,29..30,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438923"
     Region          59..289
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          99..151
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          155..201
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          204..246
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..383
                     /gene="LOC107950996"
                     /coded_by="XM_016885861.2:210..1361"
                     /db_xref="GeneID:107950996"
ORIGIN      
        1 mesaqeallp glpddlalrc larlshgyhg alesvsnrwk dlvrspeyan ykanqgwcgd
       61 wlfvvtersn nqwiaydrea drwhplpkip tdhdglqhfg fscvcvhnrl lviggshapr
      121 dtayprqtpv itnaviqfdp ykkqwtrlss mqtprshfac cvmsgkvyva ggrnlsyprg
      181 lslaevydpl sdrwddmpem pnpqmdclgi sykgkfhvls dqvglaeqnp seifdpsnkt
      241 wctvndiwpf sramqfavqv mgddqvytvv dwgeslvktr dslrgewynv gavppvhlpd
      301 hsreleafgy gfaalrhely vlggkvlkwe dsgagrfdvv rlagvrvcdp lrrplnwrei
      361 rpmcspaggs ilgcasmeek ytp
//
LOCUS       XP_016742935             261 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PXR1 [Gossypium hirsutum].
ACCESSION   XP_016742935
VERSION     XP_016742935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887446.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..261
                     /product="protein PXR1"
                     /calculated_mol_wt=29737
     CDS             1..261
                     /gene="LOC107952166"
                     /coded_by="XM_016887446.2:304..1089"
                     /db_xref="GeneID:107952166"
ORIGIN      
        1 mepsgeneek aksveteekk vedkeeekek dkevkekeek ekekekdkev kgdeekgkek
       61 ekkkkkkkdk agkekekkkk kkkdkeveeg eegkseekkk krrkkkknkg ssssssssss
      121 ssssssssss ssssdsdsdk kkkrkekkkk kqekeddkel kedehkekkd detkekkkkk
      181 kkdkdheege gkgkvkdlsk lnqmlertnk rleiliarka diemrikeae ekkcseavaa
      241 aaaatataka vveeqiteat l
//
LOCUS       XP_040941430             261 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PXR1 [Gossypium hirsutum].
ACCESSION   XP_040941430
VERSION     XP_040941430.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085496.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..261
                     /product="protein PXR1"
                     /calculated_mol_wt=29737
     CDS             1..261
                     /gene="LOC107952166"
                     /coded_by="XM_041085496.1:242..1027"
                     /db_xref="GeneID:107952166"
ORIGIN      
        1 mepsgeneek aksveteekk vedkeeekek dkevkekeek ekekekdkev kgdeekgkek
       61 ekkkkkkkdk agkekekkkk kkkdkeveeg eegkseekkk krrkkkknkg ssssssssss
      121 ssssssssss ssssdsdsdk kkkrkekkkk kqekeddkel kedehkekkd detkekkkkk
      181 kkdkdheege gkgkvkdlsk lnqmlertnk rleiliarka diemrikeae ekkcseavaa
      241 aaaatataka vveeqiteat l
//
LOCUS       XP_040941431             657 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EMBRYO SAC DEVELOPMENT ARREST 30 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941431
VERSION     XP_040941431.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085497.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..657
                     /product="protein EMBRYO SAC DEVELOPMENT ARREST 30 isoform
                     X1"
                     /calculated_mol_wt=74293
     Region          94..505
                     /region_name="O-FucT_like"
                     /note="GDP-fucose protein O-fucosyltransferase and related
                     proteins; cl16914"
                     /db_xref="CDD:450121"
     Site            order(102..105,270,272,350..352,467,492..494)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..657
                     /gene="LOC107950997"
                     /coded_by="XM_041085497.1:57..2030"
                     /db_xref="GeneID:107950997"
ORIGIN      
        1 mafkskikwv vlfvltlsla slvahlsmtk fssmnlvqys akealshdfp ntgsplktrr
       61 nkrlwgavrs leslqphanp rssypvpden tngfiyakif ggfekirssi cdlvtisrll
      121 natlvipeiq qstrskgvsy kfksfsylyd eeqfimllkn dvnivkslpe nlkaarrrse
      181 fptfkpknsa spnfyvkevl pnlkkakvvg livtdggclk silppsmsef qrlrcrvafh
      241 alqfrpeiqi lglrmverlr asgqpflayh pglvrdtlay hgcaelfqdv hteliqyrra
      301 qlikqgiind elsvdshsrr engscplmpe evglllralg ypsktiiyla gsktfggqrl
      361 liplralfgn lvdrttlcsk telsdlvgpe aplpadifrl plpkseqqli dqwkkagprp
      421 rplppppdrp iyqhekegwy awilekdkep dpspmehrmq ahrliwdald yivsveadaf
      481 fpgfnndgsg wpdfsglvig qrlyerassr tyrpdrktia alfnitrddl yhpkrdwmls
      541 vkehlnrsls edgffrqsll skpnsflshp lpecscrips vettkqikgk dgrivlggee
      601 ecpkwmelar aegagnddme saeddndtve qlepdavdat ssltslidhd eewdpnd
//
LOCUS       XP_040941432             655 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EMBRYO SAC DEVELOPMENT ARREST 30 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941432
VERSION     XP_040941432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085498.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..655
                     /product="protein EMBRYO SAC DEVELOPMENT ARREST 30 isoform
                     X2"
                     /calculated_mol_wt=74052
     Region          92..503
                     /region_name="O-FucT_like"
                     /note="GDP-fucose protein O-fucosyltransferase and related
                     proteins; cl16914"
                     /db_xref="CDD:450121"
     Site            order(100..103,268,270,348..350,465,490..492)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211383"
     CDS             1..655
                     /gene="LOC107950997"
                     /coded_by="XM_041085498.1:57..2024"
                     /db_xref="GeneID:107950997"
ORIGIN      
        1 mafkskikwv vlfvltlsla slvahlsmtk fssmnlvqys akealshdfp ntgsptrrnk
       61 rlwgavrsle slqphanprs sypvpdentn gfiyakifgg fekirssicd lvtisrllna
      121 tlvipeiqqs trskgvsykf ksfsylydee qfimllkndv nivkslpenl kaarrrsefp
      181 tfkpknsasp nfyvkevlpn lkkakvvgli vtdggclksi lppsmsefqr lrcrvafhal
      241 qfrpeiqilg lrmverlras gqpflayhpg lvrdtlayhg caelfqdvht eliqyrraql
      301 ikqgiindel svdshsrren gscplmpeev glllralgyp sktiiylags ktfggqrlli
      361 plralfgnlv drttlcskte lsdlvgpeap lpadifrlpl pkseqqlidq wkkagprprp
      421 lppppdrpiy qhekegwyaw ilekdkepdp spmehrmqah rliwdaldyi vsveadaffp
      481 gfnndgsgwp dfsglvigqr lyerassrty rpdrktiaal fnitrddlyh pkrdwmlsvk
      541 ehlnrslsed gffrqsllsk pnsflshplp ecscripsve ttkqikgkdg rivlggeeec
      601 pkwmelarae gagnddmesa eddndtveql epdavdatss ltslidhdee wdpnd
//
LOCUS       XP_040941433             604 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EMBRYO SAC DEVELOPMENT ARREST 30 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941433
VERSION     XP_040941433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085499.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..604
                     /product="protein EMBRYO SAC DEVELOPMENT ARREST 30 isoform
                     X3"
                     /calculated_mol_wt=68270
     Region          94..384
                     /region_name="O-FucT_like"
                     /note="GDP-fucose protein O-fucosyltransferase and related
                     proteins; cl16914"
                     /db_xref="CDD:450121"
     CDS             1..604
                     /gene="LOC107950997"
                     /coded_by="XM_041085499.1:57..1871"
                     /db_xref="GeneID:107950997"
ORIGIN      
        1 mafkskikwv vlfvltlsla slvahlsmtk fssmnlvqys akealshdfp ntgsplktrr
       61 nkrlwgavrs leslqphanp rssypvpden tngfiyakif ggfekirssi cdlvtisrll
      121 natlvipeiq qstrskgvsy kfksfsylyd eeqfimllkn dvnivkslpe nlkaarrrse
      181 fptfkpknsa spnfyvkevl pnlkkakvvg livtdggclk silppsmsef qrlrcrvafh
      241 alqfrpeiqi lglrmverlr asgqpflayh pglvrdtlay hgcaelfqdv hteliqyrra
      301 qlikqgiind elsvdshsrr engscplmpe evglllralg ypsktiiyla gsktfggqrl
      361 liplralfgn lvdrttlcsk telsdlvgpe aplpadifrl plpkseqqli dqwkkagprp
      421 rplppppdrp iyqhekegwy awilekdkep dpspmehrmq ahrktiaalf nitrddlyhp
      481 krdwmlsvke hlnrslsedg ffrqsllskp nsflshplpe cscripsvet tkqikgkdgr
      541 ivlggeeecp kwmelaraeg agnddmesae ddndtveqle pdavdatssl tslidhdeew
      601 dpnd
//
LOCUS       XP_040941434             316 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glycosyltransferase At5g25310 [Gossypium hirsutum].
ACCESSION   XP_040941434
VERSION     XP_040941434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085500.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..316
                     /product="probable glycosyltransferase At5g25310"
                     /calculated_mol_wt=35903
     Region          140..>290
                     /region_name="RXYLT1-like"
                     /note="ribitol-5-phosphate xylosyltransferase 1, and
                     related proteins; cl20239"
                     /db_xref="CDD:473306"
     CDS             1..316
                     /gene="LOC121212538"
                     /coded_by="XM_041085500.1:13..963"
                     /db_xref="GeneID:121212538"
ORIGIN      
        1 mgkqssslvy qifqhrfpat fkgffyflpi slalttllli fiyisttanv tktqpqttly
       61 lqtlpslvni dqtsnlpivp fedneddndn lfadpsrtar lsrasqwllg nlfglidgnd
      121 tnnkeayhdg diflqdykqm nkslkiyvyp hskddpfanv llppdtdskg nyaselmfkk
      181 almeshfvtk dpneahlfym pfsissmrsd pridvhgipd fvqnyisnit lkypywnrtg
      241 gadhfyvach sigkiafeka fvaklnviql vcsstyfpss ylphkdasmp qvwprggdpp
      301 nlltsqrkrl hfspeq
//
LOCUS       XP_016725561             459 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glycosyltransferase At5g03795 [Gossypium hirsutum].
ACCESSION   XP_016725561
VERSION     XP_016725561.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870072.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725561.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..459
                     /product="probable glycosyltransferase At5g03795"
                     /calculated_mol_wt=52348
     Region          131..409
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..459
                     /gene="LOC107937216"
                     /coded_by="XM_016870072.2:209..1588"
                     /db_xref="GeneID:107937216"
ORIGIN      
        1 mahpsmllhr plaslpsstf fflpatlaff ttlfilfyif ttpplfishq hkhnlkyplg
       61 psqsspltpi lpsngsfhls akfplndvfg gedgtlspvs srshfgskrn smndidvfhd
      121 gdifledyhq mnrsfkiyvy phrrddpfah aflpvdfqpg gnyasesyfk kalmnshfit
      181 kdprkadlff lpfsiarlrh drrvggggiq sfirdyisni stkypywnrt ggadhfyvac
      241 hsigrsamak aeevklnaiq ivcsssyflp gyvahkdasl pqvwprtddp ptittskrnk
      301 laffagains pvreklvkfw rndseiyahf grlktpyade ilgskfclhv kgfevntari
      361 adslyygcvp iilanyydlp fadilnwksf siavvtvdip llkkilrgit syeysslrgn
      421 vlkvrkhfqw hvppidfdaf fmvmyelwlr rscirmsnd
//
LOCUS       XP_040941435             776 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein E6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941435
VERSION     XP_040941435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085501.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..776
                     /product="cellulose synthase-like protein E6 isoform X1"
                     /calculated_mol_wt=88983
     Region          1..707
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..776
                     /gene="LOC121212539"
                     /coded_by="XM_041085501.1:175..2505"
                     /db_xref="GeneID:121212539"
ORIGIN      
        1 mgkngylplf etkpagglvf frsyaasifi gicficfhrv syfpvterwv wvgmfvaelw
       61 fsfyffitvi vkwnpvfrst fkdrlssrfe eeelpgvdif vctadprlep ptmvvstvls
      121 vmaydypphk lsvylsddgc sdltfyalle asrfaqlwlp fcrklkvept speayfqttp
      181 epvddvfman ewliikksye dmknriesit slgkvpayrr kehngfdewd fvlsphhhps
      241 ilqilidgrd pnaidiegka lptlvylare krpqihhnfk agalnalirv sskvsnapfi
      301 lnvdcdmfsn nskairdalc ffldegnghe iayvqypqaf dnlteneiyg slrvlmklel
      361 agfdgnggpc yvgtgcvhrr eslsgmkyse elavelkamk ydkkiigsas fneedckala
      421 sctyeentpw gkekgvkyes lvedvltgms iqskgwrsvf fnpqreaflg mgpttlldtl
      481 vqhkrwgege lqillskhcp fvygrpnmpl klqlsyciyn lwapncfatl yyvfvpsfcl
      541 frgislfpki ssswgipyly vifvhrvhsl veyvwlggtv rgwlneqrmw mfkrttsylf
      601 aaidhmlklf gfsksafait gkvadddvhr ryeqeimefg twspmftvla tlalfnllgl
      661 iavvtnnvai gdarmkifdv fgfqillcyv lvfinlpiyq gmffrkdsvs vwstepetrt
      721 adlrsdskfq svklqacntr fvfkekrskl vscicnfpyl fiitykllkl lfenld
//
LOCUS       XP_040941436             732 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein E6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941436
VERSION     XP_040941436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085502.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..732
                     /product="cellulose synthase-like protein E6 isoform X2"
                     /calculated_mol_wt=83455
     Region          1..727
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..732
                     /gene="LOC121212539"
                     /coded_by="XM_041085502.1:115..2313"
                     /db_xref="GeneID:121212539"
ORIGIN      
        1 mgkngylplf etkpagglvf frsyaasifi gicficfhrv syfpvterwv wvgmfvaelw
       61 fsfyffitvi vkwnpvfrst fkdrlssrfe eeelpgvdif vctadprlep ptmvvstvls
      121 vmaydypphk lsvylsddgc sdltfyalle asrfaqlwlp fcrklkvept speayfqttp
      181 epvddvfman ewliikksye dmknriesit slgkvpayrr kehngfdewd fvlsphhhps
      241 ilqilidgrd pnaidiegka lptlvylare krpqihhnfk agalnalirv sskvsnapfi
      301 lnvdcdmfsn nskairdalc ffldegnghe iayvqypqaf dnlteneiyg slrvlmklel
      361 agfdgnggpc yvgtgcvhrr eslsgmkyse elavelkamk ydkkiigsas fneedckala
      421 sctyeentpw gkekgvkyes lvedvltgms iqskgwrsvf fnpqreaflg mgpttlldtl
      481 vqhkrwgege lqillskhcp fvygrpnmpl klqlsyciyn lwapncfatl yyvfvpsfcl
      541 frgislfpki ssswgipyly vifvhrvhsl veyvwlggtv rgwlneqrmw mfkrttsylf
      601 aaidhmlklf gfsksafait gkvadddvhr ryeqeimefg twspmftvla tlalfnllgl
      661 iavvtnnvai gdarmkifdv fgfqillcyv lvfinlpiyq gmffrkdsgk mpasvtlqsv
      721 afallastlt iy
//
LOCUS       XP_040941437             725 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein E6 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941437
VERSION     XP_040941437.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085503.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..725
                     /product="cellulose synthase-like protein E6 isoform X3"
                     /calculated_mol_wt=83262
     Region          1..656
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..725
                     /gene="LOC121212539"
                     /coded_by="XM_041085503.1:114..2291"
                     /db_xref="GeneID:121212539"
ORIGIN      
        1 mgkngylplf etkpagglvf frsyaasifi gicficfhrv syfpvterwv wvgmfvaelw
       61 fsfyffitvi vkwnpvfrst fkdrlssrfe eeelpgvdif vctadprlep ptmvvstvls
      121 vmaydypphk lsvylsddgc sdltfyalle asrfaqlwlp fcrklkvept speayfqttp
      181 epvddvfman ewliikksye dmknriesit slgkvpayrr kehngfdewd fvlsphhhps
      241 ilqilidgrd pnaidiegka lptlvylare krpqihhnfk agalnalafd nlteneiygs
      301 lrvlmklela gfdgnggpcy vgtgcvhrre slsgmkysee lavelkamky dkkiigsasf
      361 needckalas ctyeentpwg kekgvkyesl vedvltgmsi qskgwrsvff npqreaflgm
      421 gpttlldtlv qhkrwgegel qillskhcpf vygrpnmplk lqlsyciynl wapncfatly
      481 yvfvpsfclf rgislfpkis sswgipylyv ifvhrvhslv eyvwlggtvr gwlneqrmwm
      541 fkrttsylfa aidhmlklfg fsksafaitg kvadddvhrr yeqeimefgt wspmftvlat
      601 lalfnllgli avvtnnvaig darmkifdvf gfqillcyvl vfinlpiyqg mffrkdsvsv
      661 wstepetrta dlrsdskfqs vklqacntrf vfkekrsklv scicnfpylf iitykllkll
      721 fenld
//
LOCUS       XP_040941438             706 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein E1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941438
VERSION     XP_040941438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085504.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..706
                     /product="cellulose synthase-like protein E1 isoform X4"
                     /calculated_mol_wt=81067
     Region          1..637
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..706
                     /gene="LOC121212539"
                     /coded_by="XM_041085504.1:114..2234"
                     /db_xref="GeneID:121212539"
ORIGIN      
        1 mgkngylplf etkpagglvf frsyaasifi gicficfhrv syfpvterwv wvgmfvaelw
       61 fsfyffitvi vkwnpvfrst fkdrlssrfe eeelpgvdif vctadprlep ptmvvstvls
      121 vmaydypphk lsvylsddgc sdltfyalle asrfaqlwlp fcrklkvept speayfqttp
      181 epvddvfman ewliikksye dmknriesit slgkvpayrr kehngfdewd fvlsphhhps
      241 ilqilidgrd pnaidiegka lptlvylare krpqihhnfk agalnallel agfdgnggpc
      301 yvgtgcvhrr eslsgmkyse elavelkamk ydkkiigsas fneedckala sctyeentpw
      361 gkekgvkyes lvedvltgms iqskgwrsvf fnpqreaflg mgpttlldtl vqhkrwgege
      421 lqillskhcp fvygrpnmpl klqlsyciyn lwapncfatl yyvfvpsfcl frgislfpki
      481 ssswgipyly vifvhrvhsl veyvwlggtv rgwlneqrmw mfkrttsylf aaidhmlklf
      541 gfsksafait gkvadddvhr ryeqeimefg twspmftvla tlalfnllgl iavvtnnvai
      601 gdarmkifdv fgfqillcyv lvfinlpiyq gmffrkdsvs vwstepetrt adlrsdskfq
      661 svklqacntr fvfkekrskl vscicnfpyl fiitykllkl lfenld
//
LOCUS       XP_016725546             732 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein E6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016725546
VERSION     XP_016725546.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870057.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725546.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..732
                     /product="cellulose synthase-like protein E6 isoform X1"
                     /calculated_mol_wt=83475
     Region          1..727
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..732
                     /gene="LOC107937198"
                     /coded_by="XM_016870057.2:104..2302"
                     /db_xref="GeneID:107937198"
ORIGIN      
        1 mgkngylplf etrparglvf frsyaasifi gicficfhrv syfpvterwv wvgmfvaelw
       61 fsfyffitvi vkwnpvfrct fkdrlssrfe eeellgvdif vctadprlep ptmvvstvls
      121 vmaydypphk lsvylsddgc sdltfyalle asgfaqlwlp fcrklkvept speayfqttp
      181 epvddafman ewliikktye dmririesmt rlgkvpadir kehkgfdewd fvvsrhdhps
      241 ilqilidgrd pnaidiegka lptlvylare krpqihhnfk agalnaliri sssisnapfi
      301 lnvdcdmhsn nskairdalc ffldednghe iayvqypqtf gnltkneiyg slrvvmklel
      361 agfdgnggpc yigtgcvhrr eslcgmkysk eliveskamk ydrkiiekas sieenckala
      421 sctyeentpw gkemgvkygc vvediltgic iqsrgwrsvy ltpqreaflg mvpstlldtl
      481 vqhkrwaegd fqiflskhcp fvygcqnmpl klllsyciyl fwvpncfatl yyvfvpsfcl
      541 lkgislfpki ssswgipyly vivvhrvqsl vefvwlggtv rgwlneqrmw mfkrttsyff
      601 aaidnilklc gfsksafiit gkvadddlnr ryeqesmefg tsspmftvla tlalfnlfgl
      661 vvvgtnkain ddarikvfdi fgfqillccv lvfvnlpiyq gmffrkdsgk ipasvtlrsi
      721 afallastla my
//
LOCUS       XP_016725557             662 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein E1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016725557
VERSION     XP_016725557.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725557.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..662
                     /product="cellulose synthase-like protein E1 isoform X2"
                     /calculated_mol_wt=75567
     Region          1..657
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..662
                     /gene="LOC107937198"
                     /coded_by="XM_016870068.2:104..2092"
                     /db_xref="GeneID:107937198"
ORIGIN      
        1 mgkngylplf etrparglvf frsyaasifi gicficfhrv syfpvterwv wvgmfvaelw
       61 fsfyffitvi vkwnpvfrct fkdrlssrfe eeellgvdif vctadprlep ptmvvstvls
      121 vmaydypphk lsvylsddgc sdltfyalle asgfaqlwlp fcrklkvept speayfqttp
      181 epvddafman ewliikktye dmririesmt rlgkvpadir kehkgfdewd fvvsrhdhps
      241 ilqilidgrd pnaidiegka lptlvylare krpqihhnfk agalnallel agfdgnggpc
      301 yigtgcvhrr eslcgmkysk eliveskamk ydrkiiekas sieenckala sctyeentpw
      361 gkemgvkygc vvediltgic iqsrgwrsvy ltpqreaflg mvpstlldtl vqhkrwaegd
      421 fqiflskhcp fvygcqnmpl klllsyciyl fwvpncfatl yyvfvpsfcl lkgislfpki
      481 ssswgipyly vivvhrvqsl vefvwlggtv rgwlneqrmw mfkrttsyff aaidnilklc
      541 gfsksafiit gkvadddlnr ryeqesmefg tsspmftvla tlalfnlfgl vvvgtnkain
      601 ddarikvfdi fgfqillccv lvfvnlpiyq gmffrkdsgk ipasvtlrsi afallastla
      661 my
//
LOCUS       XP_016673574             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673574
VERSION     XP_016673574.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818085.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673574.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68140
     Region          <2..>122
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          196..318
                     /region_name="Dev_Cell_Death"
                     /note="Development and cell death domain; pfam10539"
                     /db_xref="CDD:463141"
     CDS             1..598
                     /gene="LOC107893159"
                     /coded_by="XM_016818085.2:1698..3494"
                     /db_xref="GeneID:107893159"
ORIGIN      
        1 melennknea dtkaedlaks essekkspnl lkaksdiaks vaknflktrk anvtsevqrk
       61 rpkkktmsis egnkaaennv kkldpvekdq qkdattstey veksqqiqkn eentcasdsk
      121 ekitksnddp kkqrngvgpg lsnkdkknee kregkkkrkr nenkerhsnp vnnnmndekr
      181 egkgkkqeik kkekidglif mcnartkpdc frycvmgvsa gkkdlvlgir pglklflydy
      241 dvrllygiyr atssgamkle pkafggafpa qvrfsvhsdc fplaenifkk aikenydekn
      301 kfkteltarq vrkltelfrp vpvhstalpf hspsraaari tehpekreah drprearpss
      361 hreasvrdpy sntsarnyag fphernqrvg ygevaynkre dghrdlylse keyrtygllg
      421 errnltpqhh itptltsylg dyrepplrqp dtayresvpl qrdvvrsdpl rltereyrty
      481 dlgatremqp tvsaatants gvvasildsy iadpyygrys gdplvdayls rpreahliqt
      541 dhlrriesnq aerlysqyps dvlvdhnrmq rhqdvnpasa stsvssrysf ggaslpyr
//
LOCUS       XP_016673573             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673573
VERSION     XP_016673573.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818084.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673573.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68140
     Region          <2..>122
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          196..318
                     /region_name="Dev_Cell_Death"
                     /note="Development and cell death domain; pfam10539"
                     /db_xref="CDD:463141"
     CDS             1..598
                     /gene="LOC107893159"
                     /coded_by="XM_016818084.2:437..2233"
                     /db_xref="GeneID:107893159"
ORIGIN      
        1 melennknea dtkaedlaks essekkspnl lkaksdiaks vaknflktrk anvtsevqrk
       61 rpkkktmsis egnkaaennv kkldpvekdq qkdattstey veksqqiqkn eentcasdsk
      121 ekitksnddp kkqrngvgpg lsnkdkknee kregkkkrkr nenkerhsnp vnnnmndekr
      181 egkgkkqeik kkekidglif mcnartkpdc frycvmgvsa gkkdlvlgir pglklflydy
      241 dvrllygiyr atssgamkle pkafggafpa qvrfsvhsdc fplaenifkk aikenydekn
      301 kfkteltarq vrkltelfrp vpvhstalpf hspsraaari tehpekreah drprearpss
      361 hreasvrdpy sntsarnyag fphernqrvg ygevaynkre dghrdlylse keyrtygllg
      421 errnltpqhh itptltsylg dyrepplrqp dtayresvpl qrdvvrsdpl rltereyrty
      481 dlgatremqp tvsaatants gvvasildsy iadpyygrys gdplvdayls rpreahliqt
      541 dhlrriesnq aerlysqyps dvlvdhnrmq rhqdvnpasa stsvssrysf ggaslpyr
//
LOCUS       XP_016673576             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673576
VERSION     XP_016673576.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673576.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68140
     Region          <2..>122
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          196..318
                     /region_name="Dev_Cell_Death"
                     /note="Development and cell death domain; pfam10539"
                     /db_xref="CDD:463141"
     CDS             1..598
                     /gene="LOC107893159"
                     /coded_by="XM_016818087.2:388..2184"
                     /db_xref="GeneID:107893159"
ORIGIN      
        1 melennknea dtkaedlaks essekkspnl lkaksdiaks vaknflktrk anvtsevqrk
       61 rpkkktmsis egnkaaennv kkldpvekdq qkdattstey veksqqiqkn eentcasdsk
      121 ekitksnddp kkqrngvgpg lsnkdkknee kregkkkrkr nenkerhsnp vnnnmndekr
      181 egkgkkqeik kkekidglif mcnartkpdc frycvmgvsa gkkdlvlgir pglklflydy
      241 dvrllygiyr atssgamkle pkafggafpa qvrfsvhsdc fplaenifkk aikenydekn
      301 kfkteltarq vrkltelfrp vpvhstalpf hspsraaari tehpekreah drprearpss
      361 hreasvrdpy sntsarnyag fphernqrvg ygevaynkre dghrdlylse keyrtygllg
      421 errnltpqhh itptltsylg dyrepplrqp dtayresvpl qrdvvrsdpl rltereyrty
      481 dlgatremqp tvsaatants gvvasildsy iadpyygrys gdplvdayls rpreahliqt
      541 dhlrriesnq aerlysqyps dvlvdhnrmq rhqdvnpasa stsvssrysf ggaslpyr
//
LOCUS       XP_016673578             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673578
VERSION     XP_016673578.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818089.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673578.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68140
     Region          <2..>122
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          196..318
                     /region_name="Dev_Cell_Death"
                     /note="Development and cell death domain; pfam10539"
                     /db_xref="CDD:463141"
     CDS             1..598
                     /gene="LOC107893159"
                     /coded_by="XM_016818089.2:355..2151"
                     /db_xref="GeneID:107893159"
ORIGIN      
        1 melennknea dtkaedlaks essekkspnl lkaksdiaks vaknflktrk anvtsevqrk
       61 rpkkktmsis egnkaaennv kkldpvekdq qkdattstey veksqqiqkn eentcasdsk
      121 ekitksnddp kkqrngvgpg lsnkdkknee kregkkkrkr nenkerhsnp vnnnmndekr
      181 egkgkkqeik kkekidglif mcnartkpdc frycvmgvsa gkkdlvlgir pglklflydy
      241 dvrllygiyr atssgamkle pkafggafpa qvrfsvhsdc fplaenifkk aikenydekn
      301 kfkteltarq vrkltelfrp vpvhstalpf hspsraaari tehpekreah drprearpss
      361 hreasvrdpy sntsarnyag fphernqrvg ygevaynkre dghrdlylse keyrtygllg
      421 errnltpqhh itptltsylg dyrepplrqp dtayresvpl qrdvvrsdpl rltereyrty
      481 dlgatremqp tvsaatants gvvasildsy iadpyygrys gdplvdayls rpreahliqt
      541 dhlrriesnq aerlysqyps dvlvdhnrmq rhqdvnpasa stsvssrysf ggaslpyr
//
LOCUS       XP_016673575             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673575
VERSION     XP_016673575.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818086.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673575.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68140
     Region          <2..>122
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          196..318
                     /region_name="Dev_Cell_Death"
                     /note="Development and cell death domain; pfam10539"
                     /db_xref="CDD:463141"
     CDS             1..598
                     /gene="LOC107893159"
                     /coded_by="XM_016818086.2:389..2185"
                     /db_xref="GeneID:107893159"
ORIGIN      
        1 melennknea dtkaedlaks essekkspnl lkaksdiaks vaknflktrk anvtsevqrk
       61 rpkkktmsis egnkaaennv kkldpvekdq qkdattstey veksqqiqkn eentcasdsk
      121 ekitksnddp kkqrngvgpg lsnkdkknee kregkkkrkr nenkerhsnp vnnnmndekr
      181 egkgkkqeik kkekidglif mcnartkpdc frycvmgvsa gkkdlvlgir pglklflydy
      241 dvrllygiyr atssgamkle pkafggafpa qvrfsvhsdc fplaenifkk aikenydekn
      301 kfkteltarq vrkltelfrp vpvhstalpf hspsraaari tehpekreah drprearpss
      361 hreasvrdpy sntsarnyag fphernqrvg ygevaynkre dghrdlylse keyrtygllg
      421 errnltpqhh itptltsylg dyrepplrqp dtayresvpl qrdvvrsdpl rltereyrty
      481 dlgatremqp tvsaatants gvvasildsy iadpyygrys gdplvdayls rpreahliqt
      541 dhlrriesnq aerlysqyps dvlvdhnrmq rhqdvnpasa stsvssrysf ggaslpyr
//
LOCUS       XP_016673577             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673577
VERSION     XP_016673577.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818088.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673577.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68140
     Region          <2..>122
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          196..318
                     /region_name="Dev_Cell_Death"
                     /note="Development and cell death domain; pfam10539"
                     /db_xref="CDD:463141"
     CDS             1..598
                     /gene="LOC107893159"
                     /coded_by="XM_016818088.2:489..2285"
                     /db_xref="GeneID:107893159"
ORIGIN      
        1 melennknea dtkaedlaks essekkspnl lkaksdiaks vaknflktrk anvtsevqrk
       61 rpkkktmsis egnkaaennv kkldpvekdq qkdattstey veksqqiqkn eentcasdsk
      121 ekitksnddp kkqrngvgpg lsnkdkknee kregkkkrkr nenkerhsnp vnnnmndekr
      181 egkgkkqeik kkekidglif mcnartkpdc frycvmgvsa gkkdlvlgir pglklflydy
      241 dvrllygiyr atssgamkle pkafggafpa qvrfsvhsdc fplaenifkk aikenydekn
      301 kfkteltarq vrkltelfrp vpvhstalpf hspsraaari tehpekreah drprearpss
      361 hreasvrdpy sntsarnyag fphernqrvg ygevaynkre dghrdlylse keyrtygllg
      421 errnltpqhh itptltsylg dyrepplrqp dtayresvpl qrdvvrsdpl rltereyrty
      481 dlgatremqp tvsaatants gvvasildsy iadpyygrys gdplvdayls rpreahliqt
      541 dhlrriesnq aerlysqyps dvlvdhnrmq rhqdvnpasa stsvssrysf ggaslpyr
//
LOCUS       XP_040941439             152 aa            linear   PLN 06-AUG-2024
DEFINITION  superoxide dismutase [Cu-Zn] [Gossypium hirsutum].
ACCESSION   XP_040941439
VERSION     XP_040941439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085505.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="superoxide dismutase [Cu-Zn]"
                     /calculated_mol_wt=15048
     Region          1..152
                     /region_name="PLN02386"
                     /note="superoxide dismutase [Cu-Zn]"
                     /db_xref="CDD:166027"
     Site            order(5,7,17,19,49..51,112..113)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,119)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,119)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..152
                     /gene="LOC107893157"
                     /coded_by="XM_041085505.1:310..768"
                     /db_xref="GeneID:107893157"
ORIGIN      
        1 mvkavavlgs negvsgtvff sqegdgpttv tgnlsglkpg lhgfhvhalg dttngcmstg
       61 phfnpagkeh gapedenrha gdlgnvtvgd dgcasfsitd kqipltgpns iigravvvha
      121 dpddlgkggh elskstgnag grvacgiigl qg
//
LOCUS       XP_040941440             152 aa            linear   PLN 06-AUG-2024
DEFINITION  superoxide dismutase [Cu-Zn] [Gossypium hirsutum].
ACCESSION   XP_040941440
VERSION     XP_040941440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085506.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="superoxide dismutase [Cu-Zn]"
                     /calculated_mol_wt=15048
     Region          1..152
                     /region_name="PLN02386"
                     /note="superoxide dismutase [Cu-Zn]"
                     /db_xref="CDD:166027"
     Site            order(5,7,17,19,49..51,112..113)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,119)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,119)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..152
                     /gene="LOC107893157"
                     /coded_by="XM_041085506.1:126..584"
                     /db_xref="GeneID:107893157"
ORIGIN      
        1 mvkavavlgs negvsgtvff sqegdgpttv tgnlsglkpg lhgfhvhalg dttngcmstg
       61 phfnpagkeh gapedenrha gdlgnvtvgd dgcasfsitd kqipltgpns iigravvvha
      121 dpddlgkggh elskstgnag grvacgiigl qg
//
LOCUS       XP_040941441             152 aa            linear   PLN 06-AUG-2024
DEFINITION  superoxide dismutase [Cu-Zn] [Gossypium hirsutum].
ACCESSION   XP_040941441
VERSION     XP_040941441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085507.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="superoxide dismutase [Cu-Zn]"
                     /calculated_mol_wt=15048
     Region          1..152
                     /region_name="PLN02386"
                     /note="superoxide dismutase [Cu-Zn]"
                     /db_xref="CDD:166027"
     Site            order(5,7,17,19,49..51,112..113)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,119)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,119)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..152
                     /gene="LOC107893157"
                     /coded_by="XM_041085507.1:225..683"
                     /db_xref="GeneID:107893157"
ORIGIN      
        1 mvkavavlgs negvsgtvff sqegdgpttv tgnlsglkpg lhgfhvhalg dttngcmstg
       61 phfnpagkeh gapedenrha gdlgnvtvgd dgcasfsitd kqipltgpns iigravvvha
      121 dpddlgkggh elskstgnag grvacgiigl qg
//
LOCUS       XP_040941442             152 aa            linear   PLN 06-AUG-2024
DEFINITION  superoxide dismutase [Cu-Zn] [Gossypium hirsutum].
ACCESSION   XP_040941442
VERSION     XP_040941442.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085508.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="superoxide dismutase [Cu-Zn]"
                     /calculated_mol_wt=15048
     Region          1..152
                     /region_name="PLN02386"
                     /note="superoxide dismutase [Cu-Zn]"
                     /db_xref="CDD:166027"
     Site            order(5,7,17,19,49..51,112..113)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,119)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,119)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..152
                     /gene="LOC107893157"
                     /coded_by="XM_041085508.1:344..802"
                     /db_xref="GeneID:107893157"
ORIGIN      
        1 mvkavavlgs negvsgtvff sqegdgpttv tgnlsglkpg lhgfhvhalg dttngcmstg
       61 phfnpagkeh gapedenrha gdlgnvtvgd dgcasfsitd kqipltgpns iigravvvha
      121 dpddlgkggh elskstgnag grvacgiigl qg
//
LOCUS       XP_016675483             135 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl carrier protein 2, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016675483
VERSION     XP_016675483.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819994.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..135
                     /product="acyl carrier protein 2, chloroplastic"
                     /calculated_mol_wt=14315
     Region          58..129
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
     CDS             1..135
                     /gene="LOC107894774"
                     /coded_by="XM_016819994.2:204..611"
                     /db_xref="GeneID:107894774"
ORIGIN      
        1 masiaassis mqprhalatt rasglklasf vnqernnlsf rlrpvparlr iscaakpetv
       61 dkvceiarkq lalssdepvt gaskfsdlga dsldtveivm gieeefgvti kednaittvq
      121 daadlieklc rakga
//
LOCUS       XP_016673567             368 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 2-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673567
VERSION     XP_016673567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..368
                     /product="vesicle-associated protein 2-2 isoform X1"
                     /calculated_mol_wt=41529
     Region          5..111
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     Region          <240..>330
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..368
                     /gene="LOC107893155"
                     /coded_by="XM_016818078.2:198..1304"
                     /db_xref="GeneID:107893155"
ORIGIN      
        1 mntqlleiep keldivfilk kpcscsvrlt nktdqhvafk vkttspkkyc vrpnvgiimp
       61 karcdftvim qaqreappdl icrdkfliqs tvvpvgtnde ditsatfvkd sgryieehkl
      121 kvafispphs pvwstingtv nqgtdydasi pkepefsrig ihaplqtgqv akveepkmin
      181 ledlkptkdv glkprkdind dlkltkyael kpnnnffnsk elkpvkdvev kpkenvlgte
      241 efksvkekef nelkdgevkt lksveelkfa kdveemkskl tdlesklgea eatiskltee
      301 rrlstqerkt leeelallrk kanikgakvg ypllfvwmva licvyigyll apltkskasm
      361 sdlyqqmq
//
LOCUS       XP_016673568             368 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 2-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673568
VERSION     XP_016673568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818079.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..368
                     /product="vesicle-associated protein 2-2 isoform X1"
                     /calculated_mol_wt=41529
     Region          5..111
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     Region          <240..>330
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..368
                     /gene="LOC107893155"
                     /coded_by="XM_016818079.2:592..1698"
                     /db_xref="GeneID:107893155"
ORIGIN      
        1 mntqlleiep keldivfilk kpcscsvrlt nktdqhvafk vkttspkkyc vrpnvgiimp
       61 karcdftvim qaqreappdl icrdkfliqs tvvpvgtnde ditsatfvkd sgryieehkl
      121 kvafispphs pvwstingtv nqgtdydasi pkepefsrig ihaplqtgqv akveepkmin
      181 ledlkptkdv glkprkdind dlkltkyael kpnnnffnsk elkpvkdvev kpkenvlgte
      241 efksvkekef nelkdgevkt lksveelkfa kdveemkskl tdlesklgea eatiskltee
      301 rrlstqerkt leeelallrk kanikgakvg ypllfvwmva licvyigyll apltkskasm
      361 sdlyqqmq
//
LOCUS       XP_016673569             366 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 2-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673569
VERSION     XP_016673569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818080.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..366
                     /product="vesicle-associated protein 2-2 isoform X2"
                     /calculated_mol_wt=41344
     Region          5..111
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     Region          <238..>328
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..366
                     /gene="LOC107893155"
                     /coded_by="XM_016818080.2:198..1298"
                     /db_xref="GeneID:107893155"
ORIGIN      
        1 mntqlleiep keldivfilk kpcscsvrlt nktdqhvafk vkttspkkyc vrpnvgiimp
       61 karcdftvim qaqreappdl icrdkfliqs tvvpvgtnde ditsatfvkd sgryieehkl
      121 kvafispphs pvwstingtv nqgtdydasi pkepefsrig ihaplqtvak veepkminle
      181 dlkptkdvgl kprkdinddl kltkyaelkp nnnffnskel kpvkdvevkp kenvlgteef
      241 ksvkekefne lkdgevktlk sveelkfakd veemkskltd lesklgeaea tisklteerr
      301 lstqerktle eelallrkka nikgakvgyp llfvwmvali cvyigyllap ltkskasmsd
      361 lyqqmq
//
LOCUS       XP_040941443             366 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 2-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941443
VERSION     XP_040941443.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085509.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..366
                     /product="vesicle-associated protein 2-2 isoform X2"
                     /calculated_mol_wt=41344
     Region          5..111
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     Region          <238..>328
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..366
                     /gene="LOC107893155"
                     /coded_by="XM_041085509.1:590..1690"
                     /db_xref="GeneID:107893155"
ORIGIN      
        1 mntqlleiep keldivfilk kpcscsvrlt nktdqhvafk vkttspkkyc vrpnvgiimp
       61 karcdftvim qaqreappdl icrdkfliqs tvvpvgtnde ditsatfvkd sgryieehkl
      121 kvafispphs pvwstingtv nqgtdydasi pkepefsrig ihaplqtvak veepkminle
      181 dlkptkdvgl kprkdinddl kltkyaelkp nnnffnskel kpvkdvevkp kenvlgteef
      241 ksvkekefne lkdgevktlk sveelkfakd veemkskltd lesklgeaea tisklteerr
      301 lstqerktle eelallrkka nikgakvgyp llfvwmvali cvyigyllap ltkskasmsd
      361 lyqqmq
//
LOCUS       XP_016673571             338 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SIRP1 [Gossypium hirsutum].
ACCESSION   XP_016673571
VERSION     XP_016673571.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818082.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673571.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..338
                     /product="E3 ubiquitin-protein ligase SIRP1"
                     /calculated_mol_wt=36912
     Region          9..40
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          225..267
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(226,229,244,246,249,252,263,266)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..338
                     /gene="LOC107893156"
                     /coded_by="XM_016818082.2:131..1147"
                     /db_xref="GeneID:107893156"
ORIGIN      
        1 mgdrmlvgry wcyicsqmvn ptmepeikcp fcesgfveei tsvtpysnnn nggndsagst
       61 nnlllwgpil lgligglgss qlritgraqi ndgndamdde lgrefeslvt rrrrrtlgpg
      121 irilqdirte senaenegsd rggrmilfdp fndealivqg sfgfnhgqss npratisfsd
      181 ylmgpgwdll lqyladndpn rhgnppakke avkampnvti ddnlqccvcl eeieigsqak
      241 empckhkfhg gcitpwldlh sscpicrfrl psdeekmden gtgqssgrvg nrrrywipip
      301 wpseglltls gssqnaasss asleampgss saaqtddn
//
LOCUS       XP_016725397             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725397
VERSION     XP_016725397.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725397.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12195
     CDS             1..107
                     /gene="LOC107937087"
                     /coded_by="XM_016869908.2:287..610"
                     /db_xref="GeneID:107937087"
ORIGIN      
        1 mdnqdvimam avkapsewnr rekrkmrklq ravrekgrer aslkrkkedm vakeaakqkv
       61 vdefmpffva ianndmetaq nfdetammnt irttlndgeg haghnan
//
LOCUS       XP_016675484             102 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675484
VERSION     XP_016675484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819995.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..102
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11272
     CDS             1..102
                     /gene="LOC107894775"
                     /coded_by="XM_016819995.2:156..464"
                     /db_xref="GeneID:107894775"
ORIGIN      
        1 mdpgdegmam aeaaletere slracqlale akiseravll rrkqemgake aakqkvvadf
       61 mlfieaiekn dmetanrfde kamkntiltm mnddtggfgk kk
//
LOCUS       XP_016675485             101 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675485
VERSION     XP_016675485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819996.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..101
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11212
     CDS             1..101
                     /gene="LOC107894776"
                     /coded_by="XM_016819996.2:103..408"
                     /db_xref="GeneID:107894776"
ORIGIN      
        1 mepggeviam aeaaletere slrarqlale akiseravll krkrmmaake adkqkvianf
       61 mlfieaiekn dmetankfde kamkntiftm msdaggfgkk k
//
LOCUS       XP_016673579             129 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673579
VERSION     XP_016673579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818090.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13348
     CDS             1..129
                     /gene="LOC107893162"
                     /coded_by="XM_016818090.2:110..499"
                     /db_xref="GeneID:107893162"
ORIGIN      
        1 mttappqwtv vgavpkgvlf clkkhvledm psqpenprqk asppwtvstm gregsddasq
       61 gsgygksqcr hvlplwckva ggavsggvra egahggggvr regdlgfsff lnmslglelt
      121 glicnglvv
//
LOCUS       XP_016673580             112 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673580
VERSION     XP_016673580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818091.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12680
     CDS             1..112
                     /gene="LOC107893163"
                     /coded_by="XM_016818091.2:100..438"
                     /db_xref="GeneID:107893163"
ORIGIN      
        1 mdlqdvimft amvveaarmk eetrrmsell rslyfalrek dkeyemlkkk kqsmvakeap
       61 klkmvddfml fldaidkndg enalnfdeka mmnsvlammn ggnngdggkn ea
//
LOCUS       XP_016673582             282 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin-like 1-1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016673582
VERSION     XP_016673582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818093.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..282
                     /product="thioredoxin-like 1-1, chloroplastic"
                     /calculated_mol_wt=31916
     Region          122..>188
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(136,139)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..282
                     /gene="LOC107893164"
                     /coded_by="XM_016818093.2:447..1295"
                     /db_xref="GeneID:107893164"
ORIGIN      
        1 makilgkanl faacdysqkk nqkgggafys krisgfcfkk srftslkmks malrcdfkgq
       61 rvvylekktv nkrrfyqfpi kaqsqmlsgl igrtqnwwek elppnmkeva svqdlvdsll
      121 nagdklvild ffspncggcr alfpkicqla kmnpdlqflq vnyeehksmc ytlnvhvlpf
      181 frfyrgaqgr lcqfsctnat ihkfkdalar htadrcslgl tkgldekell alaankdlsf
      241 nykpkpvrld pnpvpavedi lvkktyvnrk dseektlvga rg
//
LOCUS       XP_016673583             597 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016673583
VERSION     XP_016673583.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818094.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673583.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..597
                     /product="pentatricopeptide repeat-containing protein
                     At5g15010, mitochondrial"
                     /calculated_mol_wt=69598
     Region          <180..>488
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          180..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          217..244
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          250..276
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          286..314
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..349
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          355..384
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          390..419
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          425..450
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          457..486
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          492..521
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          493..523
                     /region_name="PPR"
                     /note="PPR repeat; pfam01535"
                     /db_xref="CDD:366695"
     CDS             1..597
                     /gene="LOC107893165"
                     /coded_by="XM_016818094.2:338..2131"
                     /db_xref="GeneID:107893165"
ORIGIN      
        1 mwgirftrsk lyafsffasa hlkemhlipt qyrnpifetv vtttksiatt krlnlcfsfq
       61 lssfgtsntd fprepkvenf densdndndg gedsddfegn krlslsdgvi eyvkeimyii
      121 rvtgrnylel kikleqcgvr vssemvvevl srvrhdwevg ytfflwagkr pdyapslrey
      181 hsmisilakm rkfdtawali demrggragp clvtpqtlli mirrycamhd vgraintfya
      241 ykkfkfdvgi eefhsllsal cryknvqdae hlmfcnkgvf plntksfnii lngwcnairs
      301 preaervwre mskrgvshdv vsyasimscy skgsnlnkvl klfsqmksmr iepdrkvyna
      361 vihalakarh vkevinllkv meengigpnv vtynslikpl ckarkvdear qlfdemlqkg
      421 lspttqtyha ffrilrnged afellkkmrk lgcqptndty imlirkfsrw cqfdnvfklw
      481 nemiekgvgt drssyivlih glflngrldd aykyymemke kqflpepkid qmlqdwvsgk
      541 qyadrvmadl knnqlldkkl nnqirvqskk hdqekdflkq petrrvvrer gfsfqeq
//
LOCUS       XP_016673584             499 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g09220,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016673584
VERSION     XP_016673584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818095.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..499
                     /product="pentatricopeptide repeat-containing protein
                     At1g09220, mitochondrial"
                     /calculated_mol_wt=56750
     Region          121..148
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <125..497
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          158..183
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          185..214
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          216..243
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          292..317
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..350
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          356..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          425..453
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..499
                     /gene="LOC107893166"
                     /coded_by="XM_016818095.2:207..1706"
                     /db_xref="GeneID:107893166"
ORIGIN      
        1 mlkstnspfp sktkfsvwff rsltsflspk qneahlslsh qhkqnykkyy lfsflnenpt
       61 nqrvskqvhs hlittasfsh svrlfntvlr cyavsenpkd tiflyqqiqs fylyfkfdsf
      121 syaflikaca slkdlalgkq fhgveikmgf eshlyvqtvl vnmyvesggl veckkvfdem
      181 peknsvtwnv mitglakqgd vefgrflfek mpdrnivsws gmidgytrmn qhrealglfr
      241 rmvaddgvdp seitflailp avwnigdvki crlihgygek rgflvsdirv mnslidtyak
      301 cgcmgsalrf fdeistdtkn lvswtslisg famhgmgkea vesfekmeqe gwkpnrvtfv
      361 svlnacshgc lveeglkffk kmvneyqilp dikhygclvd mlgrtgrlee aekialeips
      421 eisnevvwri llgacsfygd vemgeratek imelergygg dyvlmsnilv gagrfadaqr
      481 lrrlmderna ikfagsslt
//
LOCUS       XP_040941445             472 aa            linear   PLN 06-AUG-2024
DEFINITION  apyrase 2 [Gossypium hirsutum].
ACCESSION   XP_040941445
VERSION     XP_040941445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085511.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..472
                     /product="apyrase 2"
                     /calculated_mol_wt=51104
     Region          70..468
                     /region_name="ASKHA_NBD_AtAPY1-like"
                     /note="nucleotide-binding domain (NBD) of Arabidopsis
                     thaliana apyrase 1 (AtAPY1), apyrase 2 (AtAPY2), and
                     similar proteins; cd24041"
                     /db_xref="CDD:466891"
     CDS             1..472
                     /gene="LOC107893168"
                     /coded_by="XM_041085511.1:405..1823"
                     /db_xref="GeneID:107893168"
ORIGIN      
        1 mikrsmarhe sisdkihkyr ggplvisipi vlitfllyvm pgksasdaav leeielnsrr
       61 vgansrgnrn yavifdagss gsrvhvycfd qnldlvpigs dlelfeqlkp glsyyakdpq
      121 aaansltsll dkaesvvpld lrsktpvrvg ataglralgg easdkilqsv rellksrstl
      181 kseangvkil dgsqegsyew vtinyllgnl grtyhdtvgi vdlgggsvqm ayaisenaas
      241 rapsvpagqd nyvnemylkg skyylyvysy lhygllaara eilkatedsg npcilegfdg
      301 tykyggeeyk asapssgssm eecrrvtlka lkvndscthm kctfggiwng gggdgqknlf
      361 vasfffdraa eagfikasdp vakvqphsfa daakracqtk yadakaiykd lgesnlayic
      421 mdlvyqytll vdgfgldpyq dvtlvkkvky rnslveaawp lgsaieavss mk
//
LOCUS       XP_016673585             240 aa            linear   PLN 06-AUG-2024
DEFINITION  aquaporin SIP1-1 [Gossypium hirsutum].
ACCESSION   XP_016673585
VERSION     XP_016673585.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818096.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..240
                     /product="aquaporin SIP1-1"
                     /calculated_mol_wt=25832
     Region          <126..229
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     CDS             1..240
                     /gene="LOC107893169"
                     /coded_by="XM_016818096.2:457..1179"
                     /db_xref="GeneID:107893169"
ORIGIN      
        1 mkgpikiaia dmvisfmwvf cssafgllty liataagvqt vrwasiviit vvffvflsif
       61 niiggflgga sfdpaattaf yaagsgadtl ismalrfpaq aagavggala imeaipeqyk
      121 hmiggpsvkv dthtgafaeg vltfaitfiv llimlrgpqs eifktwflsi vivalvtfgs
      181 aytgpsmnpa fafgwayvyn qhdtwdhfyv ywicpfigat lagwvfrkff slppvkvkkt
//
LOCUS       XP_016673586             313 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-related protein KNOLLE [Gossypium hirsutum].
ACCESSION   XP_016673586
VERSION     XP_016673586.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818097.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673586.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="syntaxin-related protein KNOLLE"
                     /calculated_mol_wt=35320
     Region          47..250
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          218..284
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(246,253,256)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            249
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..313
                     /gene="LOC107893170"
                     /coded_by="XM_016818097.2:277..1218"
                     /db_xref="GeneID:107893170"
ORIGIN      
        1 mndlmtksfm syvdlkkeam kdleagpdyd lemssnastm dqnlglflee aekikqemav
       61 irellgklqe sneeskslhk qkslkalrnk inndivtvqk kartikaqle emdranatnk
      121 rlsgckegtl ayrtriavtn glrnklkelm mdfqglrqkm mteyketvgr ryftvtgenp
      181 deaiiekiis dgnggegflt raiqehgrgk vletvveiqd rhdaakeiek sllelhqvfl
      241 dmavmveaqg eqmddiehhv mnashyvkdg skelntakqy qrssrkcmci giillllivl
      301 vivipiatsf sss
//
LOCUS       XP_040941447             269 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET9 [Gossypium hirsutum].
ACCESSION   XP_040941447
VERSION     XP_040941447.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085513.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..269
                     /product="bidirectional sugar transporter SWEET9"
                     /calculated_mol_wt=30354
     Region          12..99
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; cl46784"
                     /db_xref="CDD:481124"
     Region          134..216
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..269
                     /gene="LOC107893172"
                     /coded_by="XM_041085513.1:89..898"
                     /db_xref="GeneID:107893172"
ORIGIN      
        1 mgffgphhql afifgvlgsi vsfmvflspv ktfytiykkr taegyqsipy mvafsssmml
       61 lyygmlktna nlivgiscfg caieiiylil yivyapkrdk vftvkwiilf nlggyclimv
      121 atnlfrersk rvtvmgwvca vnsvavsasp lgimrrvirt ksveympfll sffltlcstm
      181 wffyglflqd lyvafpnvlg fllgtaqiii yviykngnkg veitekmqkg dmegsvgdin
      241 pcfpdheqei keitiviaek pvesdemka
//
LOCUS       XP_016675487             220 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein subfamily 1 member 7 [Gossypium hirsutum].
ACCESSION   XP_016675487
VERSION     XP_016675487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819998.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..220
                     /product="germin-like protein subfamily 1 member 7"
                     /calculated_mol_wt=23535
     Region          24..220
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(26,30..31,59..63,65..66,82,87,94..97,118,120,122,
                     124,130,132,134,142,144,146,149..153,155,158,173,175,177)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(79,98,100,109,112,114,119,160,172,176,183)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..220
                     /gene="LOC107894777"
                     /coded_by="XM_016819998.2:24..686"
                     /db_xref="GeneID:107894777"
ORIGIN      
        1 mealqiivai filalasslt fasdpsplqd fcvaindpkg svfvngkfck daklakadef
       61 yfsglhirkn tsnifgstvt pvnvaqmpgl htlgismvri dyapngglnp phthprasei
      121 lvvlegtlhv gfvtsnpdnr liskvlypgd vfvfpvglih fqynigntya vafaglssen
      181 pgvitianav fgsnpsinad ilakafnldr kmvknlqsef
//
LOCUS       XP_016673589             247 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein subfamily 1 member 13 [Gossypium hirsutum].
ACCESSION   XP_016673589
VERSION     XP_016673589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..247
                     /product="germin-like protein subfamily 1 member 13"
                     /calculated_mol_wt=26618
     Region          49..244
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(51,55..56,84..88,90..91,107,112,119..122,142,144,
                     146,148,154,156,158,166,168,170,173..177,179,182,197,199,
                     201)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(104,123,125,133,136,138,143,184,196,200,207)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..247
                     /gene="LOC107893177"
                     /coded_by="XM_016818100.2:16..759"
                     /db_xref="GeneID:107893177"
ORIGIN      
        1 msamqsfsic skaiannqls qyiimkgihf tviaftllaf acslasafdp splqdfcvai
       61 kdikngvfvn gkfckdpkla vaedfffsgl nmpgntsnlv gsnvtnvnvd qipglntlgi
      121 slvridyapy glnpphthpr gteilfvvkg tlyvgfvtsn pdnrlftkil npgdvfvfpi
      181 glihfqfnig kteavafagl ssqnagviti anavfgsspp inpdvltkaf qldknvvqyl
      241 qsrfwsd
//
LOCUS       XP_040941449             990 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-N-acetylglucosamine--peptide
            N-acetylglucosaminyltransferase SEC isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941449
VERSION     XP_040941449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085515.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..990
                     /product="probable UDP-N-acetylglucosamine--peptide
                     N-acetylglucosaminyltransferase SEC isoform X1"
                     /calculated_mol_wt=111117
     Region          <65..135
                     /region_name="NrfG"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; COG4235"
                     /db_xref="CDD:443378"
     Region          103..128
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          104..368
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          134..162
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          167..197
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          202..230
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          235..265
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          270..969
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          270..298
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(271,274..275,278..279,281,305,308..309,312..313,
                     315..316,339,342..343,346..347,350)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          303..333
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          338..365
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          372..400
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          409..434
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(410..411,414..415,417,441,444..445,448..449,
                     451..452,475,478..479,482..483,486)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          439..469
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          474..501
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          508..534
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..990
                     /gene="LOC107893178"
                     /coded_by="XM_041085515.1:346..3318"
                     /db_xref="GeneID:107893178"
ORIGIN      
        1 mlslqngvgi sraapygvgv fdradetsda aavaagksav yavkqepass fsivpqnghd
       61 shevdedmhl alahqmyksg nykqaldhss avynqnplrt dnllllgaiy yqlhnydmci
      121 akneealrie prfaecygnm anawkekgdi dvairyymia ielrpnfada wsnlasaymr
      181 kgrfneaaqc crqalqlspl lvdahsnlgn lmkaqglvqe ayscylealr iqptfaiaws
      241 nlaglfmdsg dlnralqyyk eavklkptfp daylnlgniy kalgmpqeai vcyqhavqtr
      301 pnnaialgnl astyyergql dlailhykqa iacdqrflea ynnlgnalkd vgrvdeaiqc
      361 ynqcltlqpn hpqaltnlgn iymewnmvaa aasyykatls vttglsapfn nlaviykqqg
      421 nyveaiscyn evlridplaa dglvnrgnty keigrvteai qdyirainir pnmaeahanl
      481 asaykdsghv eaaiksykqa lhlrpdfpea tcnllhtlqc vccwedrdkm ftevegiirr
      541 qinmsvlpsv qpfhaiaypi dpmlaldisr kyaahcsmia srfalppfnh papnriksng
      601 gnerlkvgyv ssdfgnhpls hlmgsvfgmh nrenvevfcy alsqndgtew rqriqseaeh
      661 fidvsamssd viakminedg iqilinlngy tkgarneifa mqpapiqvsy mgfpgttgad
      721 yidylvtdef vsplcyshiy seklvhlphc yfvndykqkn rdvldptcqh krsdyglped
      781 kfifacfnql ykmdpeifnt wcnilkrvpn salwllkfpa agemrlraya aaqgvqpeqi
      841 iftdvamkhe hirrsaladl cldtplcnah ttgtdvlwag lpmvtlplek matrvagslc
      901 latglgeemi vnsmkeyeeq avtlalnrpk lqtltkklke arltcplfdt arwvrnlera
      961 ylkmwnlycs gqqpqhfkvt endfdfpydr
//
LOCUS       XP_040941450             744 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-N-acetylglucosamine--peptide
            N-acetylglucosaminyltransferase SEC isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941450
VERSION     XP_040941450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085516.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..744
                     /product="probable UDP-N-acetylglucosamine--peptide
                     N-acetylglucosaminyltransferase SEC isoform X2"
                     /calculated_mol_wt=83928
     Region          1..38
                     /region_name="TPR_11"
                     /note="TPR repeat; pfam13414"
                     /db_xref="CDD:315977"
     Region          24..723
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          24..52
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(25,28..29,32..33,35,59,62..63,66..67,69..70,93,
                     96..97,100..101,104)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          57..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          92..119
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          126..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          163..188
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(164..165,168..169,171,195,198..199,202..203,
                     205..206,229,232..233,236..237,240)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          193..223
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          228..255
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          262..288
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..744
                     /gene="LOC107893178"
                     /coded_by="XM_041085516.1:247..2481"
                     /db_xref="GeneID:107893178"
ORIGIN      
        1 mdsgdlnral qyykeavklk ptfpdaylnl gniykalgmp qeaivcyqha vqtrpnnaia
       61 lgnlastyye rgqldlailh ykqaiacdqr fleaynnlgn alkdvgrvde aiqcynqclt
      121 lqpnhpqalt nlgniymewn mvaaaasyyk atlsvttgls apfnnlaviy kqqgnyveai
      181 scynevlrid plaadglvnr gntykeigrv teaiqdyira inirpnmaea hanlasaykd
      241 sghveaaiks ykqalhlrpd fpeatcnllh tlqcvccwed rdkmfteveg iirrqinmsv
      301 lpsvqpfhai aypidpmlal disrkyaahc smiasrfalp pfnhpapnri ksnggnerlk
      361 vgyvssdfgn hplshlmgsv fgmhnrenve vfcyalsqnd gtewrqriqs eaehfidvsa
      421 mssdviakmi nedgiqilin lngytkgarn eifamqpapi qvsymgfpgt tgadyidylv
      481 tdefvsplcy shiyseklvh lphcyfvndy kqknrdvldp tcqhkrsdyg lpedkfifac
      541 fnqlykmdpe ifntwcnilk rvpnsalwll kfpaagemrl rayaaaqgvq peqiiftdva
      601 mkhehirrsa ladlcldtpl cnahttgtdv lwaglpmvtl plekmatrva gslclatglg
      661 eemivnsmke yeeqavtlal nrpklqtltk klkearltcp lfdtarwvrn leraylkmwn
      721 lycsgqqpqh fkvtendfdf pydr
//
LOCUS       XP_016673592             447 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673592
VERSION     XP_016673592.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673592.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..447
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50105
     Region          76..203
                     /region_name="Neprosin_AP"
                     /note="Neprosin activation peptide; pfam14365"
                     /db_xref="CDD:464153"
     Region          228..440
                     /region_name="Neprosin"
                     /note="pfam03080"
                     /db_xref="CDD:460797"
     CDS             1..447
                     /gene="LOC107893181"
                     /coded_by="XM_016818103.2:529..1872"
                     /db_xref="GeneID:107893181"
ORIGIN      
        1 masnayiian kravsshphr qphlplllll fslffigkfd ivsalnytky trkvsnlrlq
       61 riqkhlekin kpavitiesp dgdiidcvhk rkqpaldhpl lkkhkiqrva pempkvktlk
      121 rdegsgdskr kegedliwqm whrngtrcpk gtvpirrstt rdvlrakslf hfgkkqsttt
      181 nptrradapd vvssngheha iaytgtsqev ygakatinvw dpsiqevnef slsqiwilsg
      241 sfdgsdlnsi eagwqvspel ygdsrprlft ywtsdsyqat gcynllcagf vqtnsriaig
      301 aaispvsqyd anqyditili wkdpkvgnww mgfgdnnlvg ywpaelfthl adhatmvewg
      361 gevvnsrang khtstemgsg hfaedgfgks syfrnlelvd adnslssvhd istlaentnc
      421 yniknsynne wgtyfyyggp gnnpqcp
//
LOCUS       XP_016673595             587 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673595
VERSION     XP_016673595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..587
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=65888
     Region          346..>381
                     /region_name="PSP"
                     /note="pfam04046"
                     /db_xref="CDD:461145"
     CDS             1..587
                     /gene="LOC107893182"
                     /coded_by="XM_016818106.2:355..2118"
                     /db_xref="GeneID:107893182"
ORIGIN      
        1 mnesntsvgg qdfitlpass nsmsgsesge lrdvddglhq vdsqpnnaea kdgevkteil
       61 qlnegdirnp qnnliveakv dntlagdssd meisdeitev lrvekkldev ssgahsesfk
      121 veekldgssm stkkrcldle ngspiqnhtm dgisvvkrpr mtfddqqpsi rivynfltra
      181 skqkleellq kwsewqaehg sslqenelte sgektyfpal rvgadklsav sfwiddqrrn
      241 lhdmefipld gnivplydrg famgltsada stnlegglei kdeasrcfnc gsyshslkqc
      301 pkprdnvavn narkqhqksk rnqsaasrna tryyqnsqgg kyddlkpgvl gaetrqllgl
      361 gefdpppwln rmreigyppg ylapdedeps gitiyadaev degqedgeia emvqqpeprm
      421 kmtvefpgin apipveadek lwapsrsses fksrsqshhr vnhssesgsr glerryfsdy
      481 edegapgvds rvsssyppry gnydspygfn sprdpiprpr sptsgrsyye rgrrsplvye
      541 dfgshgsygs rysprahgfe yetderwdns yldyssryss hryhsrw
//
LOCUS       XP_016673594             587 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673594
VERSION     XP_016673594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818105.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..587
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=65888
     Region          346..>381
                     /region_name="PSP"
                     /note="pfam04046"
                     /db_xref="CDD:461145"
     CDS             1..587
                     /gene="LOC107893182"
                     /coded_by="XM_016818105.2:258..2021"
                     /db_xref="GeneID:107893182"
ORIGIN      
        1 mnesntsvgg qdfitlpass nsmsgsesge lrdvddglhq vdsqpnnaea kdgevkteil
       61 qlnegdirnp qnnliveakv dntlagdssd meisdeitev lrvekkldev ssgahsesfk
      121 veekldgssm stkkrcldle ngspiqnhtm dgisvvkrpr mtfddqqpsi rivynfltra
      181 skqkleellq kwsewqaehg sslqenelte sgektyfpal rvgadklsav sfwiddqrrn
      241 lhdmefipld gnivplydrg famgltsada stnlegglei kdeasrcfnc gsyshslkqc
      301 pkprdnvavn narkqhqksk rnqsaasrna tryyqnsqgg kyddlkpgvl gaetrqllgl
      361 gefdpppwln rmreigyppg ylapdedeps gitiyadaev degqedgeia emvqqpeprm
      421 kmtvefpgin apipveadek lwapsrsses fksrsqshhr vnhssesgsr glerryfsdy
      481 edegapgvds rvsssyppry gnydspygfn sprdpiprpr sptsgrsyye rgrrsplvye
      541 dfgshgsygs rysprahgfe yetderwdns yldyssryss hryhsrw
//
LOCUS       XP_016673596             585 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673596
VERSION     XP_016673596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..585
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=65702
     Region          344..>379
                     /region_name="PSP"
                     /note="pfam04046"
                     /db_xref="CDD:461145"
     CDS             1..585
                     /gene="LOC107893182"
                     /coded_by="XM_016818107.2:283..2040"
                     /db_xref="GeneID:107893182"
ORIGIN      
        1 mnesntsvgg qdfitlpass nsmsgsesge lrdvddglhq vdsqpnnaea kdgevkteil
       61 qlnegdirnp qnnliveakv dntlagdssd meisdeitev lrvekkldev ssgahsesfk
      121 veekldgssm stkkrcldle ngspiqnhtm davvkrprmt fddqqpsiri vynfltrask
      181 qkleellqkw sewqaehgss lqeneltesg ektyfpalrv gadklsavsf widdqrrnlh
      241 dmefipldgn ivplydrgfa mgltsadast nleggleikd easrcfncgs yshslkqcpk
      301 prdnvavnna rkqhqkskrn qsaasrnatr yyqnsqggky ddlkpgvlga etrqllglge
      361 fdpppwlnrm reigyppgyl apdedepsgi tiyadaevde gqedgeiaem vqqpeprmkm
      421 tvefpginap ipveadeklw apsrssesfk srsqshhrvn hssesgsrgl erryfsdyed
      481 egapgvdsrv sssypprygn ydspygfnsp rdpiprprsp tsgrsyyerg rrsplvyedf
      541 gshgsygsry sprahgfeye tderwdnsyl dyssrysshr yhsrw
//
LOCUS       XP_016675196             310 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675196
VERSION     XP_016675196.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819707.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675196.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..310
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33319
     Region          235..305
                     /region_name="DUF3082"
                     /note="Protein of unknown function (DUF3082); cl12824"
                     /db_xref="CDD:472374"
     CDS             1..310
                     /gene="LOC107894431"
                     /coded_by="XM_016819707.2:107..1039"
                     /db_xref="GeneID:107894431"
ORIGIN      
        1 msscssssfs llkpltfpst pcpspallfh nnpiyipfkt tanhsktlhl skrltipfal
       61 tesdspkslq pdlqtllqql adsfdlpsdy fsqlpndlrl dlndaafdls ngpvidecgm
      121 elgktllnls rawesadtst syalaskvpl lansltdsak safgrrlvaa grrfqamgqy
      181 gqgelqkiak amnaagkllp assmsattee qpktetrmfk fgelqvevts ekanigaaig
      241 fvfgilswqi aqgiqsipes sleyandnal llakslrgal lavfysstil svfttiglll
      301 lgrqlksegk
//
LOCUS       XP_040941452             195 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component CSL4 [Gossypium hirsutum].
ACCESSION   XP_040941452
VERSION     XP_040941452.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085518.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..195
                     /product="exosome complex component CSL4"
                     /calculated_mol_wt=20678
     Region          2..191
                     /region_name="Csl4"
                     /note="Exosome complex RNA-binding protein Csl4, contains
                     S1 and Zn-ribbon domains [Intracellular trafficking,
                     secretion, and vesicular transport]; COG1096"
                     /db_xref="CDD:440713"
     Region          69..159
                     /region_name="S1_CSL4"
                     /note="CSL4, S1-like RNA-binding domain. S1-like
                     RNA-binding domains are found in a wide variety of
                     RNA-associated proteins. ScCSL4 protein is a subunit of
                     the exosome complex. The exosome plays a central role in
                     3' to 5' RNA processing and degradation in...; cd05791"
                     /db_xref="CDD:240217"
     Site            order(82,90,100,102)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240217"
     Site            order(84..86,88,94,125,130)
                     /site_type="other"
                     /note="subunit interface"
                     /db_xref="CDD:240217"
     CDS             1..195
                     /gene="LOC121203562"
                     /coded_by="XM_041085518.1:124..711"
                     /db_xref="GeneID:121203562"
ORIGIN      
        1 meeademvtp gevlgkatdl kagkgayaas hnntiyaslt gfrriqappp asndkrptve
       61 vtghkahgpv pepgsvviar vtkvmartas adimcvgpks vrekftgiir qqdvrateid
      121 kvdmhlsfhp gdivravvls lgdarayyls taknelgvvs aessagatmv piswtemqcp
      181 ltgqielrkv akvvn
//
LOCUS       XP_016673597             542 aa            linear   PLN 06-AUG-2024
DEFINITION  inositol phosphorylceramide glucuronosyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016673597
VERSION     XP_016673597.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818108.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673597.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..542
                     /product="inositol phosphorylceramide
                     glucuronosyltransferase 1"
                     /calculated_mol_wt=60543
     Region          33..280
                     /region_name="GT8_Glycogenin"
                     /note="Glycogenin belongs the GT 8 family and initiates
                     the biosynthesis of glycogen; cd02537"
                     /db_xref="CDD:133018"
     Site            order(106..107,110,124,126..128,149,155..157,185..186,
                     230..231,250,252,254,257)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(126,128,250)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(148..149,186,221,223..224,228,232)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..542
                     /gene="LOC107893185"
                     /coded_by="XM_016818108.2:210..1838"
                     /db_xref="GeneID:107893185"
ORIGIN      
        1 mklpklsilf llllitiqtk aalgvkaqss skeayvtlly gdefllgvrv lgksirdtgs
       61 tkdmvvlvsd gvsdyakkll kadgwivemi sllanpnqvr pkrfwgvytk lkifnmtnyk
      121 kvvyldadti vvksiedlfk cqkfcanlkh serlnsgvmv vepseavfnd mmskvntlps
      181 ytggdqgfln syysdfpnah vfdpnipdev lksrpapeme rlstlynadv glymlankwm
      241 vdeselrvih ytlgplkpwd wwtswllkpv dvwqnvreql keslpgtggg knptdellvk
      301 flfllpfcal lfcfyrsfvq tggsvcrtsl cnqirhfyhv vrssgtvayt svsssstina
      361 ssqfpnsaqn kvpaylgais vfvcfmaalv slgisisivp rqvmpwtgll lmyewtfsif
      421 flsfgaflhl iylwgkrepg pvssrmdpid sdsrkgyrqa sscdivtwyy glgmaflaia
      481 apslpcifgi talfmrlglm vvgglilaaf mtyasehlai rsflkgledr nttrsrsacf
      541 lc
//
LOCUS       XP_016673598             569 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673598
VERSION     XP_016673598.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673598.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..569
                     /product="uncharacterized protein"
                     /calculated_mol_wt=64126
     Region          25..567
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     CDS             1..569
                     /gene="LOC107893186"
                     /coded_by="XM_016818109.2:441..2150"
                     /db_xref="GeneID:107893186"
ORIGIN      
        1 mlgcecfcwh dkhsdydeft plpqpqpfsl pspipdwppg qgfatgkinl gelevvkitk
       61 fesvwscdsl hgkakgatfy kpvgipdgff clgyycqpnd qplrgyvlva reregltpev
      121 yrnydsdsdf palkkpvnys liwssdldrn gcgffwlpna pmgykamgil vtgtpeepdd
      181 devrcvredl tetceikdti hvagadpfqv wnmrpckrgm cckgvsvgtf fcstyfvsen
      241 eeleiaclkn ldpmlhampd lnqihalinh ygatvffhpd edclpssvqw ffkngallye
      301 dgelkgksid yqgsnlpsgg tndgafwidl pgdnngrenv kkgnlesael yvhvkpavgg
      361 tftdivmwif cpfngpanlk iglmniqmnk lgqhvsdweh ftlrisnftg elwqvyfsqh
      421 sggewvdafd leyikgnkpi vyssrhghas fphpgtylqg svklgigirn davrskyfvd
      481 sstrykiiaa eylgdgvvte pcwlnymrew gptivydsrs eldriinmlp ffvrfsveni
      541 fdlfptelyg eegptgpkek hnwegderc
//
LOCUS       XP_016675489             456 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675489
VERSION     XP_016675489.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820000.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675489.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..456
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53198
     CDS             1..456
                     /gene="LOC107894781"
                     /coded_by="XM_016820000.2:66..1436"
                     /db_xref="GeneID:107894781"
ORIGIN      
        1 mnlapslhqh hllygyyeer ealcdqcnkh iydraftcei ckfwlhaeca lqqlpfkish
       61 pshsqhplrl iykdnhsccn gcsglsrnwl yrcqpcdfnl dlscasstti ptqidkkinh
      121 fchhhtltqf nyrkvskyhp scfwcvklls gvcygclqcd slklrihesc linmptvite
      181 hpfhsshply iiassesvrc factyyhkmi ysckkcrfhl cvhctnlkps lkhelhqhhl
      241 tlfpilkshr inepckkcdn iwiylnplde ikffyrclec dssfhfrcli hessakheyh
      301 rheliltdff vedfsdqyyc diceqervpq hpvycckkcr fvahigcalt kikddhgsts
      361 slvggkgtsi gklmeqaern aeskieyfdh ehplcfkkvv eqnecaklvf wksqmkpmla
      421 kvvnttytkh apicpgrcyi lfhpsilsss clnlqk
//
LOCUS       XP_016673602             659 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673602
VERSION     XP_016673602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..659
                     /product="uncharacterized protein"
                     /calculated_mol_wt=73741
     Region          9..64
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <58..148
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          69..98
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          184..616
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; pfam11904"
                     /db_xref="CDD:463391"
     CDS             1..659
                     /gene="LOC107893187"
                     /coded_by="XM_016818113.2:796..2775"
                     /db_xref="GeneID:107893187"
ORIGIN      
        1 medfskyahs pahlavarrd haglrriilt lprlakagev nteaesleae lqadavsavi
       61 drrdvpgret plhlavrfrd pisaeilmaa gadwslqneh gwsalqeavc treeaiamii
      121 arhyrplawa kwcrrlpriv asasrirdfy meitfhfess vipfigriap sdtyriwkrg
      181 snlradmtla gfdgfriqrs dqtflflgeg ytsedenlsl ppgslvvlsh kekevtnale
      241 gagqqptese vahevalmtq tnmyrpgidv tqaelvphln wrrqersemv gnwkakvydm
      301 lhvtvsvksr svpgamtdee lfsvddeerm anggdndeyd dvltaeermq ldsalcsgns
      361 dglcdddehg vieckengsg asyencesng vakdkkgwfg wnkkgsknsd dpedskilkk
      421 fsklapegsn qrhvdshkss seiskedavd gkkskdkgsk kkkkkgapsd akheseykkg
      481 lrpvlwltpd fplkteellp lldilankvk airrlrellt tklplgtfpv kvaipivpti
      541 rvlvtftkfe elqpveefst plsspahfqd skskepegst swiswmrgtr ggqpsdgesh
      601 rykdevdpfh ipshytwvdv nekkrrmkak kakskkhkrq taaakggdgg qqvneevee
//
LOCUS       XP_016673603             539 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine protein phosphatase 2A regulatory subunit
            B''delta isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673603
VERSION     XP_016673603.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818114.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673603.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..539
                     /product="probable serine/threonine protein phosphatase 2A
                     regulatory subunit B''delta isoform X1"
                     /calculated_mol_wt=62072
     Region          207..480
                     /region_name="PPP2R3A_B-like"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' alpha and beta subunits, and similar proteins;
                     cd21504"
                     /db_xref="CDD:410337"
     CDS             1..539
                     /gene="LOC107893188"
                     /coded_by="XM_016818114.2:502..2121"
                     /db_xref="GeneID:107893188"
ORIGIN      
        1 meavvvgdit cldaellhlq emsplalksy peftqklfeq wlslpeankl vtslvndaka
       61 gnplnvsant sgggspssns lpsmfpagsa pplsprstsg spritkqrag lsnlgsplkv
      121 vsepvkefip qfyfknghpp pndlkeqyms risqffaghp eglqlqefkl vtkevcklps
      181 ffspslfkki dvnstglvtr dafvdywvng nlltkdvatq iytllkqpyl nylvqddfkp
      241 llqellathp gleflqstpe fqeryaetvi yriyyyinrs gtghltlrel krgnlidaml
      301 hcdeeedink vlryfsyehf yviyckfwel dtdhdflidk enlirygnha ltyrivdrif
      361 sqvprkftsk vegkmgyedf vyfilaeedk ssepsleywf kcidldgngv ltrnemqffy
      421 eeqlhrmecm aqepvlfedi lcqmidmikp qdesyimlrd lkgsklsgsv fnilfnlnkf
      481 mafetrdpfl irqerenptl tewdrfahre yirlsmeddv edasngsaev wdesleapf
//
LOCUS       XP_016673605             391 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine protein phosphatase 2A regulatory subunit
            B''delta isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673605
VERSION     XP_016673605.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818116.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673605.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..391
                     /product="probable serine/threonine protein phosphatase 2A
                     regulatory subunit B''delta isoform X2"
                     /calculated_mol_wt=46240
     Region          59..332
                     /region_name="PPP2R3A_B-like"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' alpha and beta subunits, and similar proteins;
                     cd21504"
                     /db_xref="CDD:410337"
     CDS             1..391
                     /gene="LOC107893188"
                     /coded_by="XM_016818116.2:291..1466"
                     /db_xref="GeneID:107893188"
ORIGIN      
        1 msrisqffag hpeglqlqef klvtkevckl psffspslfk kidvnstglv trdafvdywv
       61 ngnlltkdva tqiytllkqp ylnylvqddf kpllqellat hpgleflqst pefqeryaet
      121 viyriyyyin rsgtghltlr elkrgnlida mlhcdeeedi nkvlryfsye hfyviyckfw
      181 eldtdhdfli dkenlirygn haltyrivdr ifsqvprkft skvegkmgye dfvyfilaee
      241 dkssepsley wfkcidldgn gvltrnemqf fyeeqlhrme cmaqepvlfe dilcqmidmi
      301 kpqdesyiml rdlkgsklsg svfnilfnln kfmafetrdp flirqerenp tltewdrfah
      361 reyirlsmed dvedasngsa evwdesleap f
//
LOCUS       XP_016673606             595 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g08610 [Gossypium
            hirsutum].
ACCESSION   XP_016673606
VERSION     XP_016673606.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673606.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..595
                     /product="pentatricopeptide repeat-containing protein
                     At1g08610"
                     /calculated_mol_wt=66395
     Region          138..165
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          173..200
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <177..>458
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          206..235
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          241..270
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          278..305
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          313..340
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          348..375
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          383..410
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          416..445
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..498
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          451..480
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          486..515
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          521..550
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          524..568
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          556..585
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..595
                     /gene="LOC107893189"
                     /coded_by="XM_016818117.2:353..2140"
                     /db_xref="GeneID:107893189"
ORIGIN      
        1 mgytvtlhnh sveicrshcl qwglkqpgtg csslkcsivn iptsnltcsv nfsstihscl
       61 pwkvdngser evvslvcqgl qrsvcidkde fdqdecwgse dqnvsvkgkf keqinlkkvp
      121 nslmaaldgr fvrndeetnn dilqrfcsng klndasrlie imarqnqiph fpscinlirg
      181 fvkvgeldka srvlqimims ggipdnityn mmvrglckrg rmrsaidlle dmslsgcppd
      241 vityntiirs mfdhgifdqa vgfwkdqlrk gcppylityt ilielvcrhc giaqamevlh
      301 dmaiegcypd ivtynslvnl sckqgkheda alvvysiish gmepnavtyn tlihslcnhs
      361 ywnevdeilv imketlhppt vvtyniling lckyglldra ikffdqmvsq ncspdivtyn
      421 tllgalskeg maeealqllq flsgsscspg lityntvidg ftrtgdmeka melynrmsee
      481 gispddithr clvwgfcrsn qveravgilk vmaeqkhrvg asgykvvihg lckdgkvdla
      541 iqvlemmvss rskpddtiys tvikgiadag mkeeanklhq klrewnvsre gkqls
//
LOCUS       XP_016673607             260 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 42 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673607
VERSION     XP_016673607.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673607.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..260
                     /product="RNA-binding protein 42 isoform X1"
                     /calculated_mol_wt=28489
     Region          31..>131
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          132..214
                     /region_name="RRM_RBM42"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 42 (RBM42) and similar proteins; cd12383"
                     /db_xref="CDD:409817"
     CDS             1..260
                     /gene="LOC107893190"
                     /coded_by="XM_016818118.2:481..1263"
                     /db_xref="GeneID:107893190"
ORIGIN      
        1 msippssati pssssssqft yqttanssyf plpfhlqqqa qpyapspqpv pvapasvypa
       61 pvatvagvys lpqyhqaqql fqrdaqivtp ealesvkaal assetehkae tkkkaiprka
      121 agqswedptl aewpendfrl fcgdlgnevn ddvlskafar fpsfnmarvv rdkrtgktkg
      181 ygfvsfanps dlaaalkemn gkyvgnrpik lrksnwkeri dydalqrqkt egessiqass
      241 ftlflpiscl gpeisreira
//
LOCUS       XP_016673608             246 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 42 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673608
VERSION     XP_016673608.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673608.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..246
                     /product="RNA-binding protein 42 isoform X2"
                     /calculated_mol_wt=27189
     Region          31..>131
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          132..214
                     /region_name="RRM_RBM42"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 42 (RBM42) and similar proteins; cd12383"
                     /db_xref="CDD:409817"
     CDS             1..246
                     /gene="LOC107893190"
                     /coded_by="XM_016818119.2:465..1205"
                     /db_xref="GeneID:107893190"
ORIGIN      
        1 msippssati pssssssqft yqttanssyf plpfhlqqqa qpyapspqpv pvapasvypa
       61 pvatvagvys lpqyhqaqql fqrdaqivtp ealesvkaal assetehkae tkkkaiprka
      121 agqswedptl aewpendfrl fcgdlgnevn ddvlskafar fpsfnmarvv rdkrtgktkg
      181 ygfvsfanps dlaaalkemn gkyvgnrpik lrksnwkeri dydalqrqkn qnhkkpklqk
      241 kgilhk
//
LOCUS       XP_016673609             222 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 42 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016673609
VERSION     XP_016673609.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818120.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673609.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..222
                     /product="RNA-binding protein 42 isoform X3"
                     /calculated_mol_wt=24582
     Region          94..176
                     /region_name="RRM_RBM42"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 42 (RBM42) and similar proteins; cd12383"
                     /db_xref="CDD:409817"
     CDS             1..222
                     /gene="LOC107893190"
                     /coded_by="XM_016818120.2:618..1286"
                     /db_xref="GeneID:107893190"
ORIGIN      
        1 mprlpslfrs pqplstppls ppspvsilsl ntisifeqaq qlfqrdaqiv tpealesvka
       61 alassetehk aetkkkaipr kaagqswedp tlaewpendf rlfcgdlgne vnddvlskaf
      121 arfpsfnmar vvrdkrtgkt kgygfvsfan psdlaaalke mngkyvgnrp iklrksnwke
      181 ridydalqrq ktegessiqa ssftlflpis clgpeisrei ra
//
LOCUS       XP_040941454             208 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 42 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941454
VERSION     XP_040941454.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085520.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..208
                     /product="RNA-binding protein 42 isoform X4"
                     /calculated_mol_wt=23282
     Region          94..176
                     /region_name="RRM_RBM42"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 42 (RBM42) and similar proteins; cd12383"
                     /db_xref="CDD:409817"
     CDS             1..208
                     /gene="LOC107893190"
                     /coded_by="XM_041085520.1:600..1226"
                     /db_xref="GeneID:107893190"
ORIGIN      
        1 mprlpslfrs pqplstppls ppspvsilsl ntisifeqaq qlfqrdaqiv tpealesvka
       61 alassetehk aetkkkaipr kaagqswedp tlaewpendf rlfcgdlgne vnddvlskaf
      121 arfpsfnmar vvrdkrtgkt kgygfvsfan psdlaaalke mngkyvgnrp iklrksnwke
      181 ridydalqrq knqnhkkpkl qkkgilhk
//
LOCUS       XP_016673610             204 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 [Gossypium hirsutum].
ACCESSION   XP_016673610
VERSION     XP_016673610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818121.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..204
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1"
                     /calculated_mol_wt=22464
     Region          31..155
                     /region_name="ALOG_dom"
                     /note="ALOG domain; pfam04852"
                     /db_xref="CDD:398493"
     CDS             1..204
                     /gene="LOC107893192"
                     /coded_by="XM_016818121.2:593..1207"
                     /db_xref="GeneID:107893192"
ORIGIN      
        1 mdlvspqsnp nnfpspivgs npianitatp asstatpptp sryenqkrrd wntfcqylrn
       61 hrpplslsmc sgahvleflr yldqfgktkv hnqtcpffgl pnppapcpcp lrqawgslda
      121 ligrlraaye ehggrpegnp fgaravrifl revrdfqaka rgvryekkrk rpkqkmappp
      181 apqqpppppa ppiladataa rsti
//
LOCUS       XP_016673611             958 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division cycle 5-like protein [Gossypium hirsutum].
ACCESSION   XP_016673611
VERSION     XP_016673611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818122.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..958
                     /product="cell division cycle 5-like protein"
                     /calculated_mol_wt=107645
     Region          1..>303
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          406..654
                     /region_name="Myb_Cef"
                     /note="pre-mRNA splicing factor component; pfam11831"
                     /db_xref="CDD:463366"
     CDS             1..958
                     /gene="LOC107893193"
                     /coded_by="XM_016818122.2:246..3122"
                     /db_xref="GeneID:107893193"
ORIGIN      
        1 mrimikggvw kntedeilka avmkygknqw arissllvrk sakqckarwy ewldpsikkt
       61 ewtreedekl lhlaklmptq wrtiapivgr tpsqclerye klldaacard enyepgddpr
      121 klrpgeidpn peskparpdp vdmdedekem lseararlan trgkkakrka rekqleearr
      181 laslqkrrel kaagidtrqr krkrkgidyn aeipfekrpp pgfydvaded rpveqpkfpt
      241 tieelegkrr vdieaqlrkq diaknkisqr qdtpsailqa nklndpetvr krsklmlpsp
      301 qisdheleei akmgyasdll aeneelaggs gatrallany sqtprpgmtp lrtpqrtpag
      361 kgdaimmeae nlarlresqt pllggenpel hpsdfsgvtp ktqiqtpnpm ltpaatpgta
      421 gltprtgmtp ssdgysfalt pkgtpirdgl hineemdlhd sakleqrrqa dlrrnlrsgl
      481 gtlpqpkney qiviqppped neepeekiee dmsdriarer aeeearqqal lkkrskvlqr
      541 elprppsasl elirdslmrt dgdkssfvpp tsieqademi rkellslleh dnakypldek
      601 ankakkkgak rpangsipsi edfeeeemke adslikeeae ilrvamghen eslddfveah
      661 ntclndlmyf ptrnayglss vagnmeklaa lqtefenvkk kmdndkskae smekkynvlt
      721 qgyerraatl wrhiestvkq idtagtelec fqalqkqehl aashringlw eevqkqkele
      781 qtlqrrygnl mselermqrl mnvyraqaek qeevgeknha lelseaaasq vavpsaghse
      841 papslehlds sldgqpsaev dvnadsgkeh atmdigtdgn mhineplvve dkgdditqtl
      901 nkmsgdaats sevatesinp dsfstkqesi qetvestevd nscvlggdts enqtgmee
//
LOCUS       XP_016673614             358 aa            linear   PLN 06-AUG-2024
DEFINITION  probable low-specificity L-threonine aldolase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016673614
VERSION     XP_016673614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="probable low-specificity L-threonine aldolase 1"
                     /calculated_mol_wt=38052
     Region          1..352
                     /region_name="PLN02721"
                     /note="threonine aldolase"
                     /db_xref="CDD:178323"
     Site            order(62..63,66,143,176,179,204,207)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99742"
     Site            207
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
     CDS             1..358
                     /gene="LOC107893194"
                     /coded_by="XM_016818125.2:138..1214"
                     /db_xref="GeneID:107893194"
ORIGIN      
        1 mvtktvdlrs dtvtkpteam raamataevd ddvlgadpta arlesevaki mgkeaglfva
       61 sgtmgnlisv lvhcdirgse vilgdnchih iyenggisti ggvhprpvkn nddgtmdigl
      121 ieaairdprg eivypttrli clenshantg grclsaeytd kvgelakkhg vklhidgari
      181 fnasvalgvp vnrlvqaads vsvclskglg apvgsvivgs ksfiskarrl rktlgggmrq
      241 lgficaaafv alkenvakle gdhkkakvla eglnqikglr vnvaavetni iffdivegsk
      301 itaeklykkl eehgvlvmle gplrmrivlh hqisssdvly tlscfqqali gvqeengn
//
LOCUS       XP_016675490             133 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 2/3 complex subunit 5A [Gossypium hirsutum].
ACCESSION   XP_016675490
VERSION     XP_016675490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..133
                     /product="actin-related protein 2/3 complex subunit 5A"
                     /calculated_mol_wt=14977
     Region          <27..128
                     /region_name="P16-Arc"
                     /note="ARP2/3 complex 16 kDa subunit (p16-Arc); pfam04699"
                     /db_xref="CDD:461399"
     CDS             1..133
                     /gene="LOC107894782"
                     /coded_by="XM_016820001.2:16..417"
                     /db_xref="GeneID:107894782"
ORIGIN      
        1 maeaekfmgs dnvediltki enkslkiesl ikqykpieai ktalegyppq derckfanwi
       61 gvrkalmaik dvegilrsln pqyydilmky vyrglstgdr ttcdqclkih ekltekagfg
      121 cilrsladtv nti
//
LOCUS       XP_040941456             276 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoenolpyruvate carboxylase kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040941456
VERSION     XP_040941456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085522.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="phosphoenolpyruvate carboxylase kinase 1"
                     /calculated_mol_wt=31016
     Region          8..265
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(15..19,23,36,38,71,87..90,94,96,133..134,136,
                     138..139,141,151..152,155,169..173,175)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(15..18,23,36,38,71,87..90,94,138..139,141,151..152)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(19,94,96,133..134,136,138,155,169..173,175)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(151..159,169..173)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     CDS             1..276
                     /gene="LOC107893195"
                     /coded_by="XM_041085522.1:253..1083"
                     /db_xref="GeneID:107893195"
ORIGIN      
        1 msetlknkyq vceeigrgrf giisrvfcpk tqasfasksi hkrlltdpid rqclenepki
       61 mtllsphsni lqihdmfdsd dtlhlildlc qpytlhdqil qppshlsepk aasymqqlvs
      121 glahchrfgi vhrdikpdni ffdfrgklki gdfgsatwlg evgtshglvg tpyyvapeiv
      181 mgrgynekvd vwsagvvlyv mlagvppfyg etaeeifeav lrgnlrfpsr ifrsvsgeak
      241 ellrkmicrd vsrrlsaeqv lrhawmlkgg ettave
//
LOCUS       XP_016673615             342 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP1 [Gossypium hirsutum].
ACCESSION   XP_016673615
VERSION     XP_016673615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818126.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="serine/threonine-protein phosphatase PP1"
                     /calculated_mol_wt=38279
     Region          6..294
                     /region_name="MPP_PP1_PPKL"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; cd07414"
                     /db_xref="CDD:277359"
     Site            order(60,62,88,92,120..121,125..126,130,169,191..193,202,
                     216..218,244,268..272)
                     /site_type="active"
                     /db_xref="CDD:277359"
     Site            order(60,62,88,120,169,244)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277359"
     Site            order(92,125..126,130,191..193,202,216..218,268..272)
                     /site_type="other"
                     /note="natural toxin binding site [chemical binding]"
                     /db_xref="CDD:277359"
     Site            order(175,177,194,199,212,221,229..230,232..234,236..238,
                     253,257,284..285,287,289,291)
                     /site_type="other"
                     /note="MYPT1 binding site [polypeptide binding]"
                     /db_xref="CDD:277359"
     Region          <303..333
                     /region_name="Nucleoporin_FG"
                     /note="Nucleoporin FG repeat region; pfam13634"
                     /db_xref="CDD:463941"
     CDS             1..342
                     /gene="LOC107893196"
                     /coded_by="XM_016818126.2:278..1306"
                     /db_xref="GeneID:107893196"
ORIGIN      
        1 mdqgllddii nrllevrgrp gkqvqlsese irqlclvske iflqqpnlle leapikicgd
       61 ihgqysdllr lfeygglppd anylflgdyv drgkqsleti clllaykikh penffllrgn
      121 hecasinriy gfydeckrrf nvrlwrtfte cfnclpvaal idekilcmhg glspdlnnld
      181 qirslhrptd vpdtgllcdf lwsdpskdvq gwgmndrgvs ftfgpdkvse flqkhdldli
      241 crahqvvedg yeffadrqlv tifsapnycg efdnagamms vdetlmcsfq ilkpadkkpr
      301 fnfggtatar pgsasasvfg stttakpgnt pagvksflgt ri
//
LOCUS       XP_016673616             350 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673616
VERSION     XP_016673616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..350
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38861
     Region          54..173
                     /region_name="ASCH_ASC-1_like"
                     /note="ASC-1 homology domain, ASC-1-like subfamily. The
                     ASCH domain, a small beta-barrel domain found in all three
                     kingdoms of life, resembles the RNA-binding PUA domain and
                     may also interact with RNA. ASCH has been proposed to
                     function as an RNA-binding domain...; cd06554"
                     /db_xref="CDD:119346"
     CDS             1..350
                     /gene="LOC107893197"
                     /coded_by="XM_016818127.2:16..1068"
                     /db_xref="GeneID:107893197"
ORIGIN      
        1 msrdkykkqp piffrlqpia kiqilsaflt nqtllrektm rkagprkegn ytnpcltmhq
       61 pwasllvygi kriegrswpa pirgrlwiha askvpdesti kamedfyrei yalngitdik
      121 fpehypisrl lgcvevvgcl tceelvqwea lpeavrlegq tdfcwlceqp kkllvpfemr
      181 gyqrvynlek kiyeaavrgl vpvdgpapvk fplpnlrdpf slkpgsivas fsnskasaie
      241 kssslsaaia garaaatqfs kdqnirtnai lnsapdstst etrtifiedd ripdgnlkeg
      301 smeansaskq sdyveeegss srnqpptrpe qdsgapskif aaalrglkps
//
LOCUS       XP_040941457             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941457
VERSION     XP_040941457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085523.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..136
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15624
     Region          4..>102
                     /region_name="TMEM33_Pom33"
                     /note="Transmembrane protein 33/Nucleoporin POM33;
                     pfam03661"
                     /db_xref="CDD:461009"
     CDS             1..136
                     /gene="LOC107893199"
                     /coded_by="XM_041085523.1:508..918"
                     /db_xref="GeneID:107893199"
ORIGIN      
        1 mvfimavlai fplvpkslsn rayrlsfmgt acssvyylya lygrpkawtl qavqvyfqsv
       61 ittkdfnyfi ycltfvtshl clkftlipil crsleriakf lrhnfsrstl ysdsldgngm
      121 idiyrcqtvc hplwkg
//
LOCUS       XP_040941458             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941458
VERSION     XP_040941458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085524.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15133
     Region          2..>98
                     /region_name="TMEM33_Pom33"
                     /note="Transmembrane protein 33/Nucleoporin POM33;
                     pfam03661"
                     /db_xref="CDD:461009"
     CDS             1..132
                     /gene="LOC107893199"
                     /coded_by="XM_041085524.1:456..854"
                     /db_xref="GeneID:107893199"
ORIGIN      
        1 mavlaifplv pkslsnrayr lsfmgtacss vyylyalygr pkawtlqavq vyfqsvittk
       61 dfnyfiyclt fvtshlclkf tlipilcrsl eriakflrhn fsrstlysds ldgngmidiy
      121 rcqtvchplw kg
//
LOCUS       XP_040941459             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941459
VERSION     XP_040941459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085525.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15133
     Region          2..>98
                     /region_name="TMEM33_Pom33"
                     /note="Transmembrane protein 33/Nucleoporin POM33;
                     pfam03661"
                     /db_xref="CDD:461009"
     CDS             1..132
                     /gene="LOC107893199"
                     /coded_by="XM_041085525.1:400..798"
                     /db_xref="GeneID:107893199"
ORIGIN      
        1 mavlaifplv pkslsnrayr lsfmgtacss vyylyalygr pkawtlqavq vyfqsvittk
       61 dfnyfiyclt fvtshlclkf tlipilcrsl eriakflrhn fsrstlysds ldgngmidiy
      121 rcqtvchplw kg
//
LOCUS       XP_016673617             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673617
VERSION     XP_016673617.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673617.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..130
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=15039
     CDS             1..130
                     /gene="LOC107893199"
                     /coded_by="XM_016818128.2:508..900"
                     /db_xref="GeneID:107893199"
ORIGIN      
        1 mvfimavlai fplvpkslsn rayrlsfmgt acssvyylya lygrpkawtl qavqvyfqsv
       61 ittkdfnyfi ycltfvtshl clkftlipil crsleriakf lrhnfsrstl yrylqmpdsm
      121 sstlerlips
//
LOCUS       XP_040941460             126 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941460
VERSION     XP_040941460.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085526.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..126
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=14548
     CDS             1..126
                     /gene="LOC107893199"
                     /coded_by="XM_041085526.1:456..836"
                     /db_xref="GeneID:107893199"
ORIGIN      
        1 mavlaifplv pkslsnrayr lsfmgtacss vyylyalygr pkawtlqavq vyfqsvittk
       61 dfnyfiyclt fvtshlclkf tlipilcrsl eriakflrhn fsrstlyryl qmpdsmsstl
      121 erlips
//
LOCUS       XP_040941461             126 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941461
VERSION     XP_040941461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085527.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..126
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=14548
     CDS             1..126
                     /gene="LOC107893199"
                     /coded_by="XM_041085527.1:400..780"
                     /db_xref="GeneID:107893199"
ORIGIN      
        1 mavlaifplv pkslsnrayr lsfmgtacss vyylyalygr pkawtlqavq vyfqsvittk
       61 dfnyfiyclt fvtshlclkf tlipilcrsl eriakflrhn fsrstlyryl qmpdsmsstl
      121 erlips
//
LOCUS       XP_016673618             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor 1B [Gossypium hirsutum].
ACCESSION   XP_016673618
VERSION     XP_016673618.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818129.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673618.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ethylene-responsive transcription factor 1B"
                     /calculated_mol_wt=24390
     Region          80..138
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(82..83,85,87,89,91,95,97,105,107,110)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..215
                     /gene="LOC107893200"
                     /coded_by="XM_016818129.2:1056..1703"
                     /db_xref="GeneID:107893200"
ORIGIN      
        1 mdssyfqypy sqfspessss yvsqenlsle slnqalpfne ndsqemlllg vlnqthessf
       61 etnprddevs skannegevs yrgvrkrpwg kfaaeirdst rkgvrvwlgt fdtaeaaala
      121 ydraaltmrg smailnfpmk kvyqslremn yrfeegcspv lamkkrhslk skrvivkkvk
      181 eekgiismen llvledlgad yleellsmse tpdlw
//
LOCUS       XP_040941462             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor 1B [Gossypium hirsutum].
ACCESSION   XP_040941462
VERSION     XP_040941462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085528.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ethylene-responsive transcription factor 1B"
                     /calculated_mol_wt=24390
     Region          80..138
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(82..83,85,87,89,91,95,97,105,107,110)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..215
                     /gene="LOC107893200"
                     /coded_by="XM_041085528.1:784..1431"
                     /db_xref="GeneID:107893200"
ORIGIN      
        1 mdssyfqypy sqfspessss yvsqenlsle slnqalpfne ndsqemlllg vlnqthessf
       61 etnprddevs skannegevs yrgvrkrpwg kfaaeirdst rkgvrvwlgt fdtaeaaala
      121 ydraaltmrg smailnfpmk kvyqslremn yrfeegcspv lamkkrhslk skrvivkkvk
      181 eekgiismen llvledlgad yleellsmse tpdlw
//
LOCUS       XP_016675200             211 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-response factor C3 [Gossypium hirsutum].
ACCESSION   XP_016675200
VERSION     XP_016675200.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819711.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..211
                     /product="ethylene-response factor C3"
                     /calculated_mol_wt=23689
     Region          75..132
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(77..78,80,82,84,86,90,92,100,102,105)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..211
                     /gene="LOC107894434"
                     /coded_by="XM_016819711.1:1..636"
                     /db_xref="GeneID:107894434"
ORIGIN      
        1 mdssffhypn lhfspessss syvsqalpfn endsqemlll gvlnqapapa ensidtasvn
       61 ctsrdehevn skevsyrgvr krpwgkyaae irdstrnger vwlgtfdtae aaalaydqaa
      121 lairgsmail nfrmdkvyes llemnygfee gcspvltmkk rysikgkrsg kkkiikkeke
      181 smemeniivl edlgadylee llsmsesatr w
//
LOCUS       XP_016673619             345 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 14 [Gossypium hirsutum].
ACCESSION   XP_016673619
VERSION     XP_016673619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="AT-hook motif nuclear-localized protein 14"
                     /calculated_mol_wt=36257
     Region          128..239
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(128,130,132,135,160..161,178,185..188,190,192,204,
                     206,208,211,214,216..218,232,234,236,238)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..345
                     /gene="LOC107893202"
                     /coded_by="XM_016818130.2:202..1239"
                     /db_xref="GeneID:107893202"
ORIGIN      
        1 mepnethhhq hyfttttttt vtttpsttng lllhnesggs hnmlyphsvp savtsplept
       61 rrkrgrprky gtpeqamaak ktaslssker reqqqlqqla lggtsgslfg sskksqfalg
      121 nagqsftphv invvagedvg qkimmfmqqn kheicilsas gtisnaslre patsggniay
      181 egrfeiisls gsyvrteigg rtgglsacll sadgqiiggg vggplkaagp vqvivgtfvi
      241 ddkkdvsaga kgdpvggasv snvgfhsafe tsgrnpiggn ddhhhhhqsf ggshfmmqpq
      301 gmhmtswptd wgsglgdrtg feltgktglg ihqslqngey ghmad
//
LOCUS       XP_016673620             121 aa            linear   PLN 06-AUG-2024
DEFINITION  c-Myc-binding protein homolog [Gossypium hirsutum].
ACCESSION   XP_016673620
VERSION     XP_016673620.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818131.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..121
                     /product="c-Myc-binding protein homolog"
                     /calculated_mol_wt=13757
     Region          43..94
                     /region_name="ZIP_TSC22D-like"
                     /note="leucine zipper found in the TSC22 domain leucine
                     zipper transcription factors, c-Myc-binding protein, and
                     similar proteins; cl40461"
                     /db_xref="CDD:424092"
     CDS             1..121
                     /gene="LOC107893203"
                     /coded_by="XM_016818131.2:237..602"
                     /db_xref="GeneID:107893203"
ORIGIN      
        1 mmrykeekda kkeafrkyle ssgavdaltk vlvalyeqne kpssalefiq qklggptiye
       61 yeklqaeisd lqtkynellc khedackele elknmhssvs pstketndge plkdehvekn
      121 s
//
LOCUS       XP_040941463             211 aa            linear   PLN 06-AUG-2024
DEFINITION  GRF1-interacting factor 1 [Gossypium hirsutum].
ACCESSION   XP_040941463
VERSION     XP_040941463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085529.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..211
                     /product="GRF1-interacting factor 1"
                     /calculated_mol_wt=22441
     Region          20..73
                     /region_name="SSXT"
                     /note="SSXT protein (N-terminal region); pfam05030"
                     /db_xref="CDD:428268"
     CDS             1..211
                     /gene="LOC107893205"
                     /coded_by="XM_041085529.1:651..1286"
                     /db_xref="GeneID:107893205"
ORIGIN      
        1 mqqhlmqmqp mvsayypnnv ttdhiqqyld enkslilkiv esqnsgkwse caenqarlqr
       61 nlmylaaiad sqpqppavhp qfpssdimqp gsghymqhqq tqpitpqslm asrssmlfar
      121 qpfsalqqqq qqalhgqvgi ssggstglsm lqseastggg sggfpdfahg ggraitggsk
      181 qditsagesa egrggssgvq yddggqalyl k
//
LOCUS       XP_016673627             102 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673627
VERSION     XP_016673627.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818138.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..102
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11437
     CDS             1..102
                     /gene="LOC107893207"
                     /coded_by="XM_016818138.2:220..528"
                     /db_xref="GeneID:107893207"
ORIGIN      
        1 mktqpkkrkr qetfrifvlf tendysssgt etsptsrvet sgaqrgqwrr ifwlfvvlar
       61 ggqasgvera gevcgkrrka arvldpfsfa envqlwailg ls
//
LOCUS       XP_040941464             191 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LEAD-SENSITIVE 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941464
VERSION     XP_040941464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085530.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..191
                     /product="protein LEAD-SENSITIVE 1 isoform X1"
                     /calculated_mol_wt=21413
     Region          27..161
                     /region_name="NLPC_P60"
                     /note="NlpC/P60 family; cl21534"
                     /db_xref="CDD:473902"
     CDS             1..191
                     /gene="LOC107893208"
                     /coded_by="XM_041085530.1:125..700"
                     /db_xref="GeneID:107893208"
ORIGIN      
        1 mvlfltfvgi caqftervsq lmemqkgiyv gkakvknprt gkeeqienav ihflgldkng
       61 kaktyrpqcp kcfheshelg vvltcldcfy dgntiyryey evsllsftfk ssgscstfts
      121 sepdvvikra ysflhknnfg eysfffnnce hfatkcktgt alcnqilfgt gvpgaiaynv
      181 argftkglfw s
//
LOCUS       XP_016673628             191 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LEAD-SENSITIVE 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673628
VERSION     XP_016673628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..191
                     /product="protein LEAD-SENSITIVE 1 isoform X2"
                     /calculated_mol_wt=21268
     Region          21..161
                     /region_name="LRAT"
                     /note="Lecithin retinol acyltransferase; pfam04970"
                     /db_xref="CDD:398571"
     CDS             1..191
                     /gene="LOC107893208"
                     /coded_by="XM_016818139.2:67..642"
                     /db_xref="GeneID:107893208"
ORIGIN      
        1 mmatgqvlkp gdhiyskcfg glydhhgiyv gkakvknprt gkeeqienav ihflgldkng
       61 kaktyrpqcp kcfheshelg vvltcldcfy dgntiyryey evsllsftfk ssgscstfts
      121 sepdvvikra ysflhknnfg eysfffnnce hfatkcktgt alcnqilfgt gvpgaiaynv
      181 argftkglfw s
//
LOCUS       XP_016675491             189 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LEAD-SENSITIVE 1 [Gossypium hirsutum].
ACCESSION   XP_016675491
VERSION     XP_016675491.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820002.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..189
                     /product="protein LEAD-SENSITIVE 1"
                     /calculated_mol_wt=20917
     Region          22..160
                     /region_name="NLPC_P60"
                     /note="NlpC/P60 family; cl21534"
                     /db_xref="CDD:473902"
     CDS             1..189
                     /gene="LOC107894784"
                     /coded_by="XM_016820002.2:90..659"
                     /db_xref="GeneID:107894784"
ORIGIN      
        1 matgqllnpg dhiyteclgg syyhhgiyvg rglvtnpntg ktrtitnavi hflgldtegk
       61 akktkpqcqt cffkpkgqgv vltcldcfhe gnglyryeyg vsllsftfkt sgsctprscs
      121 dpntvikray dylrnqdfgd ynfvfnnceh fatkckmgka rcnqallgtg lpgalvynvt
      181 rrltkdilw
//
LOCUS       XP_016673630             345 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 1 [Gossypium hirsutum].
ACCESSION   XP_016673630
VERSION     XP_016673630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="protein WVD2-like 1"
                     /calculated_mol_wt=37585
     Region          171..250
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..345
                     /gene="LOC107893209"
                     /coded_by="XM_016818141.2:200..1237"
                     /db_xref="GeneID:107893209"
ORIGIN      
        1 mgreltdvdm dgkangvvns ngnlivsegs esnnyevkec taknsvvdng hekqealgvk
       61 stnfgtaipe dqkcmdndef satasktiga gqahhatskt gangtanvns alspvttkgs
      121 epnspitpli lrkplqpydr khpddednws ltssaasvrt arsrvtigsa ptfrsaerae
      181 krrefyqkle ekhqalever sqfeartkee qeaalkqlrk smvvkanpvp dfyyegpprk
      241 velkklpltr pkspnftwrk scgdavrssq dekakaccqt hrrslgnhte rsttanefks
      301 kgrvsgqtsn gagkakerak qvkeatkaap tkiiepsnan itvqs
//
LOCUS       XP_016673631             345 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 1 [Gossypium hirsutum].
ACCESSION   XP_016673631
VERSION     XP_016673631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="protein WVD2-like 1"
                     /calculated_mol_wt=37585
     Region          171..250
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..345
                     /gene="LOC107893209"
                     /coded_by="XM_016818142.2:191..1228"
                     /db_xref="GeneID:107893209"
ORIGIN      
        1 mgreltdvdm dgkangvvns ngnlivsegs esnnyevkec taknsvvdng hekqealgvk
       61 stnfgtaipe dqkcmdndef satasktiga gqahhatskt gangtanvns alspvttkgs
      121 epnspitpli lrkplqpydr khpddednws ltssaasvrt arsrvtigsa ptfrsaerae
      181 krrefyqkle ekhqalever sqfeartkee qeaalkqlrk smvvkanpvp dfyyegpprk
      241 velkklpltr pkspnftwrk scgdavrssq dekakaccqt hrrslgnhte rsttanefks
      301 kgrvsgqtsn gagkakerak qvkeatkaap tkiiepsnan itvqs
//
LOCUS       XP_016673632             216 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H1 [Gossypium hirsutum].
ACCESSION   XP_016673632
VERSION     XP_016673632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="histone H1"
                     /calculated_mol_wt=22233
     Region          22..87
                     /region_name="H15"
                     /note="Domain in histone families 1 and 5; smart00526"
                     /db_xref="CDD:197772"
     Site            order(29,41,72,86)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:238028"
     Site            67..78
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:238028"
     CDS             1..216
                     /gene="LOC107893211"
                     /coded_by="XM_016818143.2:86..736"
                     /db_xref="GeneID:107893211"
ORIGIN      
        1 masavasvak kktagskkpk sapshppfle misdaivslk ertgssqyai akfieekhkq
       61 lpanfrkvll vqtrkfvasg klvkvkasfk lpsayaaakk paavakkpaa akpksatttt
      121 aakskpkatk taskakakak vatpvkakak vaakpkatts kakakpaakp akvaktakks
      181 spgkkvkapa kktvavkkpk svkspakkaa pkkakk
//
LOCUS       XP_016673634             461 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin-1 [Gossypium hirsutum].
ACCESSION   XP_016673634
VERSION     XP_016673634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818145.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..461
                     /product="ankyrin-1"
                     /calculated_mol_wt=49459
     Region          26..271
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          58..86
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          88..119
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          121..152
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          156..184
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(159..160,163..165,167..168,172,175,184,186,188,
                     192..193,196..198,200..201,205,208,216,218,220,224..225,
                     228..230,232..233,237,240,249)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          186..216
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          218..249
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          339..>444
                     /region_name="PLN03088"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional"
                     /db_xref="CDD:215568"
     Site            order(342..343,345,369,372..373,376..377,379..380,403,
                     406..407,410..411,414)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          367..397
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          402..430
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..461
                     /gene="LOC107893212"
                     /coded_by="XM_016818145.2:110..1495"
                     /db_xref="GeneID:107893212"
ORIGIN      
        1 mspdasaala vrqkvqtfln aactgnldll kkiasqldeg kglaktvadi kdankrgaih
       61 faaregktev ckylleelkl dvntkdedgd tpllhaarkg htltakylle hgadpaipsn
      121 ldatalhhaa gigdvellky ildkgvkvds qsdagtplvw aaghgqreav kvlldyhanp
      181 naenednitp llssvaagsl actdlliqag akvnitaggt tplhiaadhg spelinsllk
      241 agadpnatde dglkpvqvaa arghrgavei lfpltsridt ipewtvdgil kymqsetdkq
      301 leqmkkltea kstrdtalpa ndlpevtpea kkkaaeaksr gdeafkgkdf hmavdaytqa
      361 idldptdaal hsnrslcwir lgqaehaltd aracralrpd wpkacyrega alrllqkyde
      421 aanafyegvq ldpenkelvn afreaveagr kfhgtdqeks s
//
LOCUS       XP_016673635             142 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogenesis-related protein PR-4A [Gossypium hirsutum].
ACCESSION   XP_016673635
VERSION     XP_016673635.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818146.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673635.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..142
                     /product="pathogenesis-related protein PR-4A"
                     /calculated_mol_wt=15070
     Region          22..140
                     /region_name="DPBB_barwin-like"
                     /note="double-psi beta-barrel fold of the barwin family;
                     cd22777"
                     /db_xref="CDD:439259"
     CDS             1..142
                     /gene="LOC107893213"
                     /coded_by="XM_016818146.2:32..460"
                     /db_xref="GeneID:107893213"
ORIGIN      
        1 meklrvcivv lacvvvsaaa qsasnvraty hlynpqninw dltaasafca twdankplaw
       61 rqkygwtafc gpagpqgqaa cgrclrvtnt atgtqatvri vdqcsnggld ldvnvfnqld
      121 tngngnaqgh ltvnyefvnc gd
//
LOCUS       XP_040941465             142 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogenesis-related protein PR-4 [Gossypium hirsutum].
ACCESSION   XP_040941465
VERSION     XP_040941465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085531.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..142
                     /product="pathogenesis-related protein PR-4"
                     /calculated_mol_wt=15398
     Region          22..140
                     /region_name="DPBB_RlpA_EXP_N-like"
                     /note="double-psi beta-barrel fold of RlpA, N-terminal
                     domain of expansins, and similar domains; cl41724"
                     /db_xref="CDD:455124"
     CDS             1..142
                     /gene="LOC121212544"
                     /coded_by="XM_041085531.1:114..542"
                     /db_xref="GeneID:121212544"
ORIGIN      
        1 mekmrvcivv laclvvsaaa qsgtnvrasy heynpqninw dlnaasvyca twdanrplew
       61 rrrygwtafc apggpqgqaa cgrclrvtnt gtgnqatvri vdqcqnngld ldvnvfrqld
      121 sngvgsangy ltvnyefvnc gd
//
LOCUS       XP_040941466             246 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein IAA16 [Gossypium hirsutum].
ACCESSION   XP_040941466
VERSION     XP_040941466.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085532.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..246
                     /product="auxin-responsive protein IAA16"
                     /calculated_mol_wt=26768
     Region          19..237
                     /region_name="AUX_IAA"
                     /note="AUX/IAA family; pfam02309"
                     /db_xref="CDD:460529"
     CDS             1..246
                     /gene="LOC121212545"
                     /coded_by="XM_041085532.1:259..999"
                     /db_xref="GeneID:121212545"
ORIGIN      
        1 mtsimgtedd kystinfeet elrlglpgan gnegettknn gkrgfsetvn lklnlssket
       61 vaedsdkmke ksstdtakpp akaqvvgwpp vrsfrknima vqkasseeeg gskkagnsaa
      121 atttttaaaf vkvsmdgapy lrkvdlklyk syqqlsdals kmfssftign cgshgmkdfm
      181 nesklidlln gseyvptyed rdgdwmlvgd vpwemfvdsc krlrimkgse aiglaprave
      241 kcknrg
//
LOCUS       XP_040941467             190 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-induced protein 22B [Gossypium hirsutum].
ACCESSION   XP_040941467
VERSION     XP_040941467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085533.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..190
                     /product="auxin-induced protein 22B"
                     /calculated_mol_wt=21082
     Region          11..188
                     /region_name="AUX_IAA"
                     /note="AUX/IAA family; pfam02309"
                     /db_xref="CDD:460529"
     CDS             1..190
                     /gene="LOC107893230"
                     /coded_by="XM_041085533.1:192..764"
                     /db_xref="GeneID:107893230"
ORIGIN      
        1 mafekdlnld atelrlglpg ssdesaknqt patlrsnnkr alpeesmstn ataskncdqe
       61 taplpkaqvv gwppirsyrk nnlqpkkseg eisgiyvkvs mdgapylrki dlkvfkgype
      121 llkaleemfk fkageysere gyngsefvpt yedkdgdwml vgdvpwemft nsckklkimk
      181 gsearglgcv
//
LOCUS       XP_016673655             157 aa            linear   PLN 06-AUG-2024
DEFINITION  sec-independent protein translocase protein TATA, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016673655
VERSION     XP_016673655.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818166.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..157
                     /product="sec-independent protein translocase protein
                     TATA, chloroplastic"
                     /calculated_mol_wt=16599
     Region          74..157
                     /region_name="TatA_B_E"
                     /note="mttA/Hcf106 family; cl00788"
                     /db_xref="CDD:445098"
     CDS             1..157
                     /gene="LOC107893228"
                     /coded_by="XM_016818166.2:314..787"
                     /db_xref="GeneID:107893228"
ORIGIN      
        1 meitsitlsl arppvapslp fsssqsnffs tgstislfnk aksqtksvsf vvgrprrgtt
       61 aepakkgltc nalfglgvpe lvviagvaal lfgpkklpev gksigktvks fqqaakefei
      121 elkkepesmt eqpkenttav seekkpdlev ssskesv
//
LOCUS       XP_016673654             475 aa            linear   PLN 06-AUG-2024
DEFINITION  ammonium transporter 2 member 4 [Gossypium hirsutum].
ACCESSION   XP_016673654
VERSION     XP_016673654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..475
                     /product="ammonium transporter 2 member 4"
                     /calculated_mol_wt=51929
     Region          22..439
                     /region_name="Ammonium_transp"
                     /note="Ammonium Transporter Family; cl03012"
                     /db_xref="CDD:445985"
     CDS             1..475
                     /gene="LOC107893227"
                     /coded_by="XM_016818165.2:906..2333"
                     /db_xref="GeneID:107893227"
ORIGIN      
        1 melpsnlipd easpewmnkg dnawqlttat lvglqtipgl vilygsmvkr kwainsafra
       61 fyafamvlic wvgwgfrmsf gdklvfflgk pgvaldekfl lkrafagylp tatmvffqsv
      121 veaitvvlia gsllgrmnfr awilfvplwf tfsytiaafs iwcpqgwlak lgvidfaggf
      181 vihlsagvag ftaafwvgpr aekdrrncpp nnvilmlaga gllwmgwsgf nggapfvast
      241 isglailnth vctatsiltw llldslffgk psvlgaiqgm itglvcitpa agvvqcwaai
      301 imgiisgsvp wytmmvlhnk vkllklvddp iaifhthaia gglggiltgf favpklcrlf
      361 ymvtdwekyl glvyglqngr tpagfkqmgi qiaamgfviv lnvvvtsiic wfiglivplr
      421 msdeelengd davhgeeafa lwhegerlvg rrhnnkvydt hefsfveskg evqmv
//
LOCUS       XP_040941468             151 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-like protein 11 [Gossypium hirsutum].
ACCESSION   XP_040941468
VERSION     XP_040941468.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085534.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..151
                     /product="calmodulin-like protein 11"
                     /calculated_mol_wt=17015
     Region          1..148
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..151
                     /gene="LOC121212546"
                     /coded_by="XM_041085534.1:117..572"
                     /db_xref="GeneID:121212546"
ORIGIN      
        1 mgeimseeli aefqeafclf dkdgdgcitm eelaiaiksl dqnptqeelq nminevdsng
       61 ngtiefgefl nlmaskmkea eaedelkeaf rvfdkdqdgy ispyelrlvm mnigekltde
      121 eleqmiread ldgdgqvnye efvrmmlaaa s
//
LOCUS       XP_016673653             177 aa            linear   PLN 06-AUG-2024
DEFINITION  PITH domain-containing protein At3g04780 [Gossypium hirsutum].
ACCESSION   XP_016673653
VERSION     XP_016673653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..177
                     /product="PITH domain-containing protein At3g04780"
                     /calculated_mol_wt=19538
     Region          17..161
                     /region_name="PITH"
                     /note="PITH domain; pfam06201"
                     /db_xref="CDD:461848"
     CDS             1..177
                     /gene="LOC107893224"
                     /coded_by="XM_016818164.2:159..692"
                     /db_xref="GeneID:107893224"
ORIGIN      
        1 msaaesatai hrnqvdlldf idwsgvecln qssshplpna lkqgyredeg lnlesdadeq
       61 lliyipftqv iklhsivvmg seedgpktvk lfanrehmgf snvsdfppsd tavlsqdnlk
      121 gkpvvvkyvk fqnvrsltif iednqsgsei tkvqkialyg stvettdmkg lkkiedh
//
LOCUS       XP_016673651             615 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673651
VERSION     XP_016673651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818162.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..615
                     /product="serine/threonine-protein kinase Nek2 isoform X1"
                     /calculated_mol_wt=68622
     Region          3..254
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(10..14,18,31,33,64,81..84,88,90,125,127,129..130,
                     132,143,146,148,161..164)
                     /site_type="active"
                     /db_xref="CDD:270855"
     Site            order(10..11,13..14,18,31,33,64,82..84,88,130,132,148)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270855"
     Site            order(14,88,90,125,127,129,146,161..164)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(142..151,157..164)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..615
                     /gene="LOC107893223"
                     /coded_by="XM_016818162.2:268..2115"
                     /db_xref="GeneID:107893223"
ORIGIN      
        1 meqyevleqi gkgafgsall vrhkhekkky vlkkirlarq tdrsrrsahq emeliskirn
       61 pfiveykdsw vekgcyvcii igyceggdma eaikkangkl klckwlvqll maldylhvnh
      121 ilhrdvkcsn ifltkdqdir lgdfglakil tsddltssvv gtpsymcpel ladipygsks
      181 diwslgcciy emtslkpafk afdmlalink inksivaplp tkysgafrgl vksmphknpe
      241 lrpsaeellr hphlqpyvlk aqnkinnprr nslpvnwpet nikktrfsdp vevrfsgyre
      301 rrqpysndrt lnpsisgaeq dsvcstkgkh havpgylnqr ledlsvdssq gtvickpits
      361 klssitktpr sslakaaata krkteptknr dsfpgsrtpi kkplpatrrt slplatrttv
      421 resasmskag ilhliqspdv svnapridki aefplasyed affpihktss isaqgssglp
      481 qfvdrsitkd kctvqtsdra sikpcftdaw qgiqrsmfka dgenatdssd qnatagassr
      541 tssdiqrwrf dpssfqqrae alegllefsa rllqqeryde lgvllkpfgp gkaspretai
      601 wltksfkent gkped
//
LOCUS       XP_040941469             505 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941469
VERSION     XP_040941469.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085535.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="serine/threonine-protein kinase Nek1 isoform X2"
                     /calculated_mol_wt=55856
     Region          <1..144
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..505
                     /gene="LOC107893223"
                     /coded_by="XM_041085535.1:170..1687"
                     /db_xref="GeneID:107893223"
ORIGIN      
        1 maldylhvnh ilhrdvkcsn ifltkdqdir lgdfglakil tsddltssvv gtpsymcpel
       61 ladipygsks diwslgcciy emtslkpafk afdmlalink inksivaplp tkysgafrgl
      121 vksmphknpe lrpsaeellr hphlqpyvlk aqnkinnprr nslpvnwpet nikktrfsdp
      181 vevrfsgyre rrqpysndrt lnpsisgaeq dsvcstkgkh havpgylnqr ledlsvdssq
      241 gtvickpits klssitktpr sslakaaata krkteptknr dsfpgsrtpi kkplpatrrt
      301 slplatrttv resasmskag ilhliqspdv svnapridki aefplasyed affpihktss
      361 isaqgssglp qfvdrsitkd kctvqtsdra sikpcftdaw qgiqrsmfka dgenatdssd
      421 qnatagassr tssdiqrwrf dpssfqqrae alegllefsa rllqqeryde lgvllkpfgp
      481 gkaspretai wltksfkent gkped
//
LOCUS       XP_016673648             566 aa            linear   PLN 06-AUG-2024
DEFINITION  zeta-carotene desaturase, chloroplastic/chromoplastic [Gossypium
            hirsutum].
ACCESSION   XP_016673648
VERSION     XP_016673648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818159.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..566
                     /product="zeta-carotene desaturase,
                     chloroplastic/chromoplastic"
                     /calculated_mol_wt=62380
     Region          2..550
                     /region_name="PLN02487"
                     /note="zeta-carotene desaturase"
                     /db_xref="CDD:215268"
     CDS             1..566
                     /gene="LOC107893220"
                     /coded_by="XM_016818159.2:354..2054"
                     /db_xref="GeneID:107893220"
ORIGIN      
        1 masasflfaa tglssvggvk sprhfvkssl dnnvsdmsvn apkglfppep ehyrgpklkv
       61 aiigaglagm stavelldqg hevdiyesrs figgkvgsfv drrgnhiemg lhvffgcynn
      121 lfrlmkkvga dknllvkdht htfvnkggel geldfrfpvg apihgmrafl stnqlktydk
      181 arnalalals pvvkalinpd gamrdirdld nisfsdwfls kggtrmsiqr mwdpvayalg
      241 fidcdnisar cmltifslfa tkteasllrm lkgspdvyls gpirnyiter ggrfhlrwgc
      301 reilydksad getyvtglam skatnkklvt adayvaacdv pgikrllpsg wreseffnni
      361 yelvgvpvvt vqlryngwvt elrdlqwarq lrqaigldnl lytpdadfsc fadlaltspe
      421 dyyiegqgsl lqcvltpgdp ymplpndeii krvskqvltl fpssqglevi wssvvkigqs
      481 lyregpgkdp frpdqktpik nfflagsytk qdyidsmega tlsgrqasay icdageelaa
      541 lrkklvmvgs qeqmetssvt delslv
//
LOCUS       XP_016675492             362 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 14 [Gossypium hirsutum].
ACCESSION   XP_016675492
VERSION     XP_016675492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820003.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="protein IQ-DOMAIN 14"
                     /calculated_mol_wt=41380
     Region          109..>136
                     /region_name="IQCD"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); cd23767"
                     /db_xref="CDD:467745"
     Region          268..>316
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..362
                     /gene="LOC107894786"
                     /coded_by="XM_016820003.2:1026..2114"
                     /db_xref="GeneID:107894786"
ORIGIN      
        1 mgkaskwlvn fllgrkddkg krknlsisfd eenlvsspsa tpssassfkr rwsfgklssk
       61 drahkssrsl dsmiatpllk qavfnmeirh dntrvftmam mnssrrktka ryaavenaaa
      121 tqiqaafrsy larkalhalr glvklqalvr gylvrkqtta tlrsmhalms iqvrarfqri
      181 qmadqsqldv ksqslrygrf lqemefkrsq reginekhgl vksqnglmny sqmerieqgi
      241 ikyysgelpi lkrqpkheef sftthnsprh spptskatpa rssfsshdyp ympsymantq
      301 ssraklrsqs eprqrpalnf kakskritsa eemdddilpr ysfsqskgva dehqdpwivk
      361 ly
//
LOCUS       XP_016673649             203 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L2, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016673649
VERSION     XP_016673649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="60S ribosomal protein L2, mitochondrial"
                     /calculated_mol_wt=21987
     Region          <58..202
                     /region_name="RplB"
                     /note="Ribosomal protein L2 [Translation, ribosomal
                     structure and biogenesis]; COG0090"
                     /db_xref="CDD:439860"
     CDS             1..203
                     /gene="LOC107893221"
                     /coded_by="XM_016818160.2:123..734"
                     /db_xref="GeneID:107893221"
ORIGIN      
        1 mallrgrtas lnlfnrllhq sfrapnrnls svaadvhnqs tienmkrdll nldinsqigs
       61 cmpiasmrig tfihnievnp gqggklvraa gtsakilkep ksryclirlp sgaeklidtr
      121 cratvgtvsn pshgakklrk agqsrwlgrr pvvrgvamnp vdhphgggeg rskssgsygk
      181 gsrtpwgkpc kcgfktaknr rrn
//
LOCUS       XP_016673650             134 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S24-1 [Gossypium hirsutum].
ACCESSION   XP_016673650
VERSION     XP_016673650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="40S ribosomal protein S24-1"
                     /calculated_mol_wt=15433
     Region          5..132
                     /region_name="PTZ00071"
                     /note="40S ribosomal protein S24; Provisional"
                     /db_xref="CDD:240256"
     CDS             1..134
                     /gene="LOC107893222"
                     /coded_by="XM_016818161.2:139..543"
                     /db_xref="GeneID:107893222"
ORIGIN      
        1 madkavtirt rkfmtnrlls rkqfvidvlh pgrpnvakae lkeklsrmye vkdpnsifvf
       61 kfrthfgggk stgfgliyds vesakkyepk yrlirngldk kveksrkqmk erknrakkvr
      121 gvkktkases akkk
//
LOCUS       XP_016673647            1040 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein Sec24-like At4g32640 [Gossypium
            hirsutum].
ACCESSION   XP_016673647
VERSION     XP_016673647.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818158.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673647.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1040
                     /product="protein transport protein Sec24-like At4g32640"
                     /calculated_mol_wt=112329
     Region          <6..225
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          303..1036
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1040
                     /gene="LOC107893219"
                     /coded_by="XM_016818158.2:173..3295"
                     /db_xref="GeneID:107893219"
ORIGIN      
        1 matpmpsgvp rqpppqtdnp nfqqkqeslp ddlqkwnpnk pspfpgsapt lpplvrppps
       61 sstsapsqpn srpgappplv vpgpnvppnv gsvrpfgppn gppspfrsps gppspfgpps
      121 gppspfgtrp ppgslpssmg ggpvisprgs gapgpggrpg afgsssrngp pvgvpppmmv
      181 tgrspgpaps mgpfvgspqa spkpgpptqs appfsaplaa pfgtqtwapg qvapptaapn
      241 aavqpprmfg mpppqpnqpl paidqtgasl edarkinsnq iprpttsysk iqydtrqgnq
      301 anipppascd yivkdtgncs prymrctihq vpctadlltn cgmelalmvq plaplhpsee
      361 pipvvdfgeg gpircsrckg yinpfmrftd hgrqficnfc gcvgstphey qcnlgpdgrr
      421 rdaderpelc rgtvefvatk dymmrdpmpa vyfflidvsm nairtgataa acaaisqvia
      481 dlpegprtml giatfdstvh fynlkrvlhq plmlivpdvh dvyipletdv vvqlsecrkh
      541 ieqllesipt mfqdnstaes afvaaikaaf laikssggkl lvfqsvlpsv gmialsarda
      601 egrgnisage kephkplqpa dkalktmaie faecqvcvdv ftttqtyvdi asisvipgtt
      661 ggqvyyyypf ssisdpvkly ndlrwnitrp qgfeavmrvr csqgidvkey hgnfckript
      721 dvdlpgidsd kaivvtlkhd dklqdgseca fqcallyttv ygqrrirvst lslpctrnit
      781 nlfratdlda qfvcslkqva neipftpllq ireqvtnici nkllayrkfc ttattsgqfi
      841 lpealkllpl ytlaltkstg lqtdvkiddr sfwinyvshi stpsavclvl pqmiavhnld
      901 fdkqeengsa ippvlplsse fvseegiyll engvngliyi gslvdsnivr qlfgfstvee
      961 tptqfalqqy dnplskklnd vvneirhqrc sylrwtlcrk gdasgalffs yliedatpkd
     1021 gpsyseflah lhrsiqakms
//
LOCUS       XP_016673638             763 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 48 [Gossypium hirsutum].
ACCESSION   XP_016673638
VERSION     XP_016673638.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818149.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673638.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..763
                     /product="WD repeat-containing protein 48"
                     /calculated_mol_wt=83359
     Region          34..368
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(34,57,61,67..68,82..83,100,104,110..111,124..125,
                     143,148,154..155,217,234,239,245..246,258..259,277,281,
                     287..288,300..301,318,323,329..330,342,360,362,368)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          222..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          634..758
                     /region_name="Ubl_WDR48"
                     /note="Ubiquitin-like (Ubl) domain found in WD
                     repeat-containing protein 48 (WDR48) and similar proteins;
                     cd17041"
                     /db_xref="CDD:340561"
     Site            order(634..637,639,657..659,664,668)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:340561"
     CDS             1..763
                     /gene="LOC107893215"
                     /coded_by="XM_016818149.2:12..2303"
                     /db_xref="GeneID:107893215"
ORIGIN      
        1 mhrvgsagnn snssrprkek rltyvlndsd dtkhsaginc lavlkssvsd gcnylftgsr
       61 dgtlkrwala edaatcsatf eshvdwvndt viagentlvs cssdttlkiw nclsdgtctr
      121 tlrqhsdyvt claaaernan vvasgglgge vfvwdieaav tplskssdvm eddfsnging
      181 sanslpvssl rpissnnsit ahttqcpgyv piaakghkes vyalamndng sllvsggtek
      241 vvrvwdprtg sktmklrght dnvralllds tgryclsgss dsmirlwdlg qqrcvhsyav
      301 htdsvwalas tptfthvysg grdlslyltd lttreslllc tkehpvlqla lhddsiwvat
      361 tdssvhrwpa egrnpqkvfq rggsflagnl sfsrarvsle gstpaavyke pifsipgtpa
      421 ivqheilnnr rhvltkdtag svklweitrg vvvedygqvs fdekkqelfe mvsipawftv
      481 dtrlgslsvh ldtpqcfsae mysvdlnitg kpeddkvnla retlkgllah wmtkrrqrlg
      541 sqasangdvl sgkdntarsl ahsrievdgn aendsmvhpp fefsmvspps iisegsqggp
      601 wrkkiteldg tedekdfpww vldcvlnnrl pprentkcsf ylhpcegtav qiltqgklsa
      661 prilrinkvv nyvvekmvld kpidtgntdg slapghggql qhsavvdgss ksglkpwpkp
      721 rpsveilcnn qvlstdmsla tvrayiwkkp edlvlnyrvv qgr
//
LOCUS       XP_016673637             763 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 48 [Gossypium hirsutum].
ACCESSION   XP_016673637
VERSION     XP_016673637.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818148.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673637.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..763
                     /product="WD repeat-containing protein 48"
                     /calculated_mol_wt=83359
     Region          34..368
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(34,57,61,67..68,82..83,100,104,110..111,124..125,
                     143,148,154..155,217,234,239,245..246,258..259,277,281,
                     287..288,300..301,318,323,329..330,342,360,362,368)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          222..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          634..758
                     /region_name="Ubl_WDR48"
                     /note="Ubiquitin-like (Ubl) domain found in WD
                     repeat-containing protein 48 (WDR48) and similar proteins;
                     cd17041"
                     /db_xref="CDD:340561"
     Site            order(634..637,639,657..659,664,668)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:340561"
     CDS             1..763
                     /gene="LOC107893215"
                     /coded_by="XM_016818148.2:97..2388"
                     /db_xref="GeneID:107893215"
ORIGIN      
        1 mhrvgsagnn snssrprkek rltyvlndsd dtkhsaginc lavlkssvsd gcnylftgsr
       61 dgtlkrwala edaatcsatf eshvdwvndt viagentlvs cssdttlkiw nclsdgtctr
      121 tlrqhsdyvt claaaernan vvasgglgge vfvwdieaav tplskssdvm eddfsnging
      181 sanslpvssl rpissnnsit ahttqcpgyv piaakghkes vyalamndng sllvsggtek
      241 vvrvwdprtg sktmklrght dnvralllds tgryclsgss dsmirlwdlg qqrcvhsyav
      301 htdsvwalas tptfthvysg grdlslyltd lttreslllc tkehpvlqla lhddsiwvat
      361 tdssvhrwpa egrnpqkvfq rggsflagnl sfsrarvsle gstpaavyke pifsipgtpa
      421 ivqheilnnr rhvltkdtag svklweitrg vvvedygqvs fdekkqelfe mvsipawftv
      481 dtrlgslsvh ldtpqcfsae mysvdlnitg kpeddkvnla retlkgllah wmtkrrqrlg
      541 sqasangdvl sgkdntarsl ahsrievdgn aendsmvhpp fefsmvspps iisegsqggp
      601 wrkkiteldg tedekdfpww vldcvlnnrl pprentkcsf ylhpcegtav qiltqgklsa
      661 prilrinkvv nyvvekmvld kpidtgntdg slapghggql qhsavvdgss ksglkpwpkp
      721 rpsveilcnn qvlstdmsla tvrayiwkkp edlvlnyrvv qgr
//
LOCUS       XP_016673640             323 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016673640
VERSION     XP_016673640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818151.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="bifunctional L-3-cyanoalanine synthase/cysteine
                     synthase D1 isoform X1"
                     /calculated_mol_wt=34257
     Region          1..323
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(20..22,35,41,43,86,89,105..106,109..110,113..114,
                     169..170,261..263,265..267,292,302,305)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107204"
     Site            order(48,79,182..187,227,271,298..299)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107204"
     Site            48
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107204"
     CDS             1..323
                     /gene="LOC107893216"
                     /coded_by="XM_016818151.2:436..1407"
                     /db_xref="GeneID:107893216"
ORIGIN      
        1 medkyaikkd vteligntpm vylnnivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitsgks vlidttsgnt giamafigaa rgykvivtmp aymsierriv lrafgaevrl
      121 tdpakgfkgs ldkaleilkn trngymlrqf enpsnpkihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrflkekns kikvygvepv esavlnggks gshliqgiga giipdvldvg
      241 lldevvqiss eeaietakll alkegllvgi ssgaaaaaai klakrpensg klivvifpsa
      301 gerylssalf eslrheaenm aid
//
LOCUS       XP_016673641             323 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016673641
VERSION     XP_016673641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818152.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="bifunctional L-3-cyanoalanine synthase/cysteine
                     synthase D1 isoform X1"
                     /calculated_mol_wt=34257
     Region          1..323
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(20..22,35,41,43,86,89,105..106,109..110,113..114,
                     169..170,261..263,265..267,292,302,305)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107204"
     Site            order(48,79,182..187,227,271,298..299)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107204"
     Site            48
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107204"
     CDS             1..323
                     /gene="LOC107893216"
                     /coded_by="XM_016818152.2:166..1137"
                     /db_xref="GeneID:107893216"
ORIGIN      
        1 medkyaikkd vteligntpm vylnnivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitsgks vlidttsgnt giamafigaa rgykvivtmp aymsierriv lrafgaevrl
      121 tdpakgfkgs ldkaleilkn trngymlrqf enpsnpkihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrflkekns kikvygvepv esavlnggks gshliqgiga giipdvldvg
      241 lldevvqiss eeaietakll alkegllvgi ssgaaaaaai klakrpensg klivvifpsa
      301 gerylssalf eslrheaenm aid
//
LOCUS       XP_040941470             314 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040941470
VERSION     XP_040941470.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085536.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="bifunctional L-3-cyanoalanine synthase/cysteine
                     synthase D1 isoform X2"
                     /calculated_mol_wt=33233
     Region          3..295
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..314
                     /gene="LOC107893216"
                     /coded_by="XM_041085536.1:438..1382"
                     /db_xref="GeneID:107893216"
ORIGIN      
        1 medkyaikkd vteligntpm vylnnivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitsgks vlidttsgnt giamafigaa rgykvivtmp aymsierriv lrafgaevrl
      121 tdpakgfkgs ldkaleilkn trngymlrqf enpsnpkihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrflkekns kikvygvepv esavlnggks gshliqgiga giipdvldvg
      241 lldevvqiss eeaietakll alkegllvgi ssgaaaaaai klakrpensg klivvscipf
      301 fklvhiatma ipie
//
LOCUS       XP_040941471             296 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 isoform
            X3 [Gossypium hirsutum].
ACCESSION   XP_040941471
VERSION     XP_040941471.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085537.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..296
                     /product="bifunctional L-3-cyanoalanine synthase/cysteine
                     synthase D1 isoform X3"
                     /calculated_mol_wt=31682
     Region          1..296
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(20..22,35,41,43,86,89,105..106,109..110,113..114,
                     169..170,261..263,265..267,275,278)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107204"
     Site            order(48,79,182..187,227,271..272)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107204"
     Site            48
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107204"
     CDS             1..296
                     /gene="LOC107893216"
                     /coded_by="XM_041085537.1:438..1328"
                     /db_xref="GeneID:107893216"
ORIGIN      
        1 medkyaikkd vteligntpm vylnnivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitsgks vlidttsgnt giamafigaa rgykvivtmp aymsierriv lrafgaevrl
      121 tdpakgfkgs ldkaleilkn trngymlrqf enpsnpkihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrflkekns kikvygvepv esavlnggks gshliqgiga giipdvldvg
      241 lldevvqiss eeaietakll alkegllvif psagerylss alfeslrhea enmaid
//
LOCUS       XP_016673644             284 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine synthase isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016673644
VERSION     XP_016673644.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818155.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..284
                     /product="cysteine synthase isoform X4"
                     /calculated_mol_wt=30429
     Region          3..265
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..284
                     /gene="LOC107893216"
                     /coded_by="XM_016818155.2:436..1290"
                     /db_xref="GeneID:107893216"
ORIGIN      
        1 medkyaikkd vteligntpm vylnnivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitsgks vlidttsgnt giamafigaa rgykvivtmp aymsierriv lrafgaevrl
      121 tdpakgfkgs ldkaleilkn trngymlrqf enpsnpkihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrflkekns kikvygvepv esavlnggks gshliqgiga giipdvldvg
      241 lldevvqiss eeaietakll alkegllqql qlswqrgqkt qans
//
LOCUS       XP_040941472             277 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 isoform
            X5 [Gossypium hirsutum].
ACCESSION   XP_040941472
VERSION     XP_040941472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085538.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..277
                     /product="bifunctional L-3-cyanoalanine synthase/cysteine
                     synthase D1 isoform X5"
                     /calculated_mol_wt=29386
     Region          3..277
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..277
                     /gene="LOC107893216"
                     /coded_by="XM_041085538.1:449..1282"
                     /db_xref="GeneID:107893216"
ORIGIN      
        1 medkyaikkd vteligntpm vylnnivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitsgks vlidttsgnt giamafigaa rgykvivtmp aymsierriv lrafgaevrl
      121 tdpakgfkgs ldkaleilkn trngymlrqf enpsnpkvyg vepvesavln ggksgshliq
      181 gigagiipdv ldvglldevv qisseeaiet akllalkegl lvgissgaaa aaaiklakrp
      241 ensgklivvi fpsageryls salfeslrhe aenmaid
//
LOCUS       XP_016673646             323 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016673646
VERSION     XP_016673646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818157.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="bifunctional L-3-cyanoalanine synthase/cysteine
                     synthase D1 isoform X1"
                     /calculated_mol_wt=34025
     Region          1..323
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(20..22,35,41,43,86,89,105..106,109..110,113..114,
                     169..170,261..263,265..267,292,302,305)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107204"
     Site            order(48,79,182..187,227,271,298..299)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107204"
     Site            48
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107204"
     CDS             1..323
                     /gene="LOC107893217"
                     /coded_by="XM_016818157.2:374..1345"
                     /db_xref="GeneID:107893217"
ORIGIN      
        1 megkcaikkd vteligntpm vylnhivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitpgks vlieptsgnt giglafigaa rgykvivtmp asvsierriv lrafgaevcl
      121 tnpakgfkgv ldkadeilkn tpngymlrqf anpanpqihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrfrkekns eikvygvepv esavlnggkp gahliqgmga giipdvldvg
      241 lldevvqvss eeaiqtakqi alkegllvgi ssgantaaai klakrpenag klivvifpsa
      301 gerylssamf eslrheaenm pid
//
LOCUS       XP_040941473             269 aa            linear   PLN 06-AUG-2024
DEFINITION  putative inactive cysteine synthase 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941473
VERSION     XP_040941473.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085539.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..269
                     /product="putative inactive cysteine synthase 2 isoform
                     X2"
                     /calculated_mol_wt=28442
     Region          4..>254
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..269
                     /gene="LOC107893217"
                     /coded_by="XM_041085539.1:317..1126"
                     /db_xref="GeneID:107893217"
ORIGIN      
        1 megkcaikkd vteligntpm vylnhivdgc gariaaklel mepcssvkdr iaysmikdae
       61 dkglitpgks vlieptsgnt giglafigaa rgykvivtmp asvsierriv lrafgaevcl
      121 tnpakgfkgv ldkadeilkn tpngymlrqf anpanpqihy ettgpeiwkd segkvdvlva
      181 gigtggtvtg agrfrkekns eikvygvepv esavlnggkp gahliqgmga giipdvldvg
      241 lldevvqhqs sdpliilydg hgsfletvq
//
LOCUS       XP_016673636             344 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673636
VERSION     XP_016673636.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818147.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673636.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38696
     CDS             1..344
                     /gene="LOC107893214"
                     /coded_by="XM_016818147.2:174..1208"
                     /db_xref="GeneID:107893214"
ORIGIN      
        1 magygyayrg gyttydggva prggtdgwnk tsyssdhtcq pvfidaegrr kpitsytgph
       61 gsteyyvtkt eiievpymae ykqrapvrve vvrdygegkl itrplspgkr ressspvryh
      121 teekwnkpss pvqydvkekw nkpsspvryr veekwnkpss pvqydveekw nkpsspvryr
      181 veekwnrpss pvryhaeekw tnrpsspvke hpqqvmdfis kvqtqasrpn kfgplsatyw
      241 rqtpattttt vggpwnnqsh gggwskghea nlsqptnnin taveylkeav kppasrfngy
      301 pntidsreae rkygglavgt spigsygrti dsreaarkyg gtav
//
LOCUS       XP_016673672             552 aa            linear   PLN 06-AUG-2024
DEFINITION  double-stranded RNA-binding protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673672
VERSION     XP_016673672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818183.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..552
                     /product="double-stranded RNA-binding protein 2 isoform
                     X1"
                     /calculated_mol_wt=61432
     Region          1..69
                     /region_name="DSRM_AtDRB-like_rpt1"
                     /note="first double-stranded RNA binding motif of
                     Arabidopsis thaliana double-stranded RNA-binding proteins
                     (AtDRBs)and similar proteins; cd19907"
                     /db_xref="CDD:380736"
     Site            order(5,7..8,11..12,17..18,27..31,33,51..54,57..58)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380736"
     Region          86..154
                     /region_name="DSRM_AtDRB-like_rpt2"
                     /note="second double-stranded RNA binding motif of
                     Arabidopsis thaliana double-stranded RNA-binding proteins
                     (AtDRBs)and similar proteins; cd19908"
                     /db_xref="CDD:380737"
     Site            order(91,93..94,97..98,103..104,113..117,119,136..139,
                     142..143)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380737"
     CDS             1..552
                     /gene="LOC107893246"
                     /coded_by="XM_016818183.2:322..1980"
                     /db_xref="GeneID:107893246"
ORIGIN      
        1 mfknqlqela qrscfnlpsy sciregpdha prfkatvnfn getfespmfc stlrqaehaa
       61 aeialntlan rgpsralaar vldetgvykn llqetahrag lnlpvyttvr sgpghipsfs
      121 cmvdlagfsf tgdpartkkq aqknaamaaw salrkcmipv frikvsqdgs ssssspslef
      181 kgkqeqeqvv iarflsslrp sevrpsmqyd yqyekhrsvp vcrdltppnq slysahgesw
      241 pypsfplemt mpiyqiwqqe qllqlqshlf sfpvspvppp apqflpildl drhlqvrgqe
      301 prfmspriai stthpslyis nhsasqptmg kstvtiqeih eeikeespks ppphvvndrl
      361 vpgqtnaetg igeskqedhk qkntelesks dtghrksdag srpvnnrlqn phafesshlr
      421 sqypprrsyy gnsrpapsya vasptiqtvs pnssmrpnmq epttqvpvlp rmrigappfs
      481 trpsfertnl gsmhhssiap pvrirsvvpv csappsrktp nfnkerllpn kekkdtvaed
      541 lstaasefsn cf
//
LOCUS       XP_040941474             552 aa            linear   PLN 06-AUG-2024
DEFINITION  double-stranded RNA-binding protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941474
VERSION     XP_040941474.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085540.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..552
                     /product="double-stranded RNA-binding protein 2 isoform
                     X1"
                     /calculated_mol_wt=61432
     Region          1..69
                     /region_name="DSRM_AtDRB-like_rpt1"
                     /note="first double-stranded RNA binding motif of
                     Arabidopsis thaliana double-stranded RNA-binding proteins
                     (AtDRBs)and similar proteins; cd19907"
                     /db_xref="CDD:380736"
     Site            order(5,7..8,11..12,17..18,27..31,33,51..54,57..58)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380736"
     Region          86..154
                     /region_name="DSRM_AtDRB-like_rpt2"
                     /note="second double-stranded RNA binding motif of
                     Arabidopsis thaliana double-stranded RNA-binding proteins
                     (AtDRBs)and similar proteins; cd19908"
                     /db_xref="CDD:380737"
     Site            order(91,93..94,97..98,103..104,113..117,119,136..139,
                     142..143)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380737"
     CDS             1..552
                     /gene="LOC107893246"
                     /coded_by="XM_041085540.1:449..2107"
                     /db_xref="GeneID:107893246"
ORIGIN      
        1 mfknqlqela qrscfnlpsy sciregpdha prfkatvnfn getfespmfc stlrqaehaa
       61 aeialntlan rgpsralaar vldetgvykn llqetahrag lnlpvyttvr sgpghipsfs
      121 cmvdlagfsf tgdpartkkq aqknaamaaw salrkcmipv frikvsqdgs ssssspslef
      181 kgkqeqeqvv iarflsslrp sevrpsmqyd yqyekhrsvp vcrdltppnq slysahgesw
      241 pypsfplemt mpiyqiwqqe qllqlqshlf sfpvspvppp apqflpildl drhlqvrgqe
      301 prfmspriai stthpslyis nhsasqptmg kstvtiqeih eeikeespks ppphvvndrl
      361 vpgqtnaetg igeskqedhk qkntelesks dtghrksdag srpvnnrlqn phafesshlr
      421 sqypprrsyy gnsrpapsya vasptiqtvs pnssmrpnmq epttqvpvlp rmrigappfs
      481 trpsfertnl gsmhhssiap pvrirsvvpv csappsrktp nfnkerllpn kekkdtvaed
      541 lstaasefsn cf
//
LOCUS       XP_016673673             543 aa            linear   PLN 06-AUG-2024
DEFINITION  double-stranded RNA-binding protein 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673673
VERSION     XP_016673673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818184.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..543
                     /product="double-stranded RNA-binding protein 2 isoform
                     X2"
                     /calculated_mol_wt=60357
     Region          1..69
                     /region_name="DSRM_AtDRB-like_rpt1"
                     /note="first double-stranded RNA binding motif of
                     Arabidopsis thaliana double-stranded RNA-binding proteins
                     (AtDRBs)and similar proteins; cd19907"
                     /db_xref="CDD:380736"
     Site            order(5,7..8,11..12,17..18,27..31,33,51..54,57..58)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380736"
     Region          86..154
                     /region_name="DSRM_AtDRB-like_rpt2"
                     /note="second double-stranded RNA binding motif of
                     Arabidopsis thaliana double-stranded RNA-binding proteins
                     (AtDRBs)and similar proteins; cd19908"
                     /db_xref="CDD:380737"
     Site            order(91,93..94,97..98,103..104,113..117,119,136..139,
                     142..143)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380737"
     CDS             1..543
                     /gene="LOC107893246"
                     /coded_by="XM_016818184.2:329..1960"
                     /db_xref="GeneID:107893246"
ORIGIN      
        1 mfknqlqela qrscfnlpsy sciregpdha prfkatvnfn getfespmfc stlrqaehaa
       61 aeialntlan rgpsralaar vldetgvykn llqetahrag lnlpvyttvr sgpghipsfs
      121 cmvdlagfsf tgdpartkkq aqknaamaaw salrklsqdg sssssspsle fkgkqeqeqv
      181 viarflsslr psevrpsmqy dyqyekhrsv pvcrdltppn qslysahges wpypsfplem
      241 tmpiyqiwqq eqllqlqshl fsfpvspvpp papqflpild ldrhlqvrgq eprfmspria
      301 istthpslyi snhsasqptm gkstvtiqei heeikeespk sppphvvndr lvpgqtnaet
      361 gigeskqedh kqkntelesk sdtghrksda gsrpvnnrlq nphafesshl rsqypprrsy
      421 ygnsrpapsy avasptiqtv spnssmrpnm qepttqvpvl prmrigappf strpsfertn
      481 lgsmhhssia ppvrirsvvp vcsappsrkt pnfnkerllp nkekkdtvae dlstaasefs
      541 ncf
//
LOCUS       XP_040941475             562 aa            linear   PLN 06-AUG-2024
DEFINITION  probable nucleolar protein 5-2 [Gossypium hirsutum].
ACCESSION   XP_040941475
VERSION     XP_040941475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085541.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..562
                     /product="probable nucleolar protein 5-2"
                     /calculated_mol_wt=61911
     Region          2..66
                     /region_name="NOP5NT"
                     /note="NOP5NT (NUC127) domain; pfam08156"
                     /db_xref="CDD:462382"
     Region          167..394
                     /region_name="Nop"
                     /note="snoRNA binding domain, fibrillarin; pfam01798"
                     /db_xref="CDD:460335"
     CDS             1..562
                     /gene="LOC107893247"
                     /coded_by="XM_041085541.1:173..1861"
                     /db_xref="GeneID:107893247"
ORIGIN      
        1 mlvlfetpag falfkvldeg klnkvedlsk eflapdsark vvslkafskf entaealeaa
       61 tkllesapsk glrkflrahc dgetlgvads klgnaikekl kidcvhnnav mellrgvrtq
      121 ltelisglga qdlapmslgl shslsryklk fsadkvdtmi vqaigllddl dkelntyamr
      181 vrewygwhfp eltkiiqdni myakavklmg dranaakldf sevlpeefet elkeaavism
      241 gteisdldlt nikdlcdqvl nlseyraqly dylksrmntv apnltalvge lvgarliahg
      301 gslinlakqp gstvqilgae kalfralktk hstpkygliy haslvgqaap khkgkisrsl
      361 aakaalairc dalgddqdns mglenrakle arlralegke lgrsagsakg kpkievydkd
      421 rkkgaglitp aktynpaads vlsqitntaa lneqdtvpkk kkveaeppqm ekaaevpaie
      481 akkekkkkkk adkeaglptn enepeceept ekekkkhqtk dvenaevgek kkkkrkheeq
      541 edkesevqtk kekkkkkkkt ed
//
LOCUS       XP_040941476             562 aa            linear   PLN 06-AUG-2024
DEFINITION  probable nucleolar protein 5-2 [Gossypium hirsutum].
ACCESSION   XP_040941476
VERSION     XP_040941476.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085542.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..562
                     /product="probable nucleolar protein 5-2"
                     /calculated_mol_wt=61911
     Region          2..66
                     /region_name="NOP5NT"
                     /note="NOP5NT (NUC127) domain; pfam08156"
                     /db_xref="CDD:462382"
     Region          167..394
                     /region_name="Nop"
                     /note="snoRNA binding domain, fibrillarin; pfam01798"
                     /db_xref="CDD:460335"
     CDS             1..562
                     /gene="LOC107893247"
                     /coded_by="XM_041085542.1:209..1897"
                     /db_xref="GeneID:107893247"
ORIGIN      
        1 mlvlfetpag falfkvldeg klnkvedlsk eflapdsark vvslkafskf entaealeaa
       61 tkllesapsk glrkflrahc dgetlgvads klgnaikekl kidcvhnnav mellrgvrtq
      121 ltelisglga qdlapmslgl shslsryklk fsadkvdtmi vqaigllddl dkelntyamr
      181 vrewygwhfp eltkiiqdni myakavklmg dranaakldf sevlpeefet elkeaavism
      241 gteisdldlt nikdlcdqvl nlseyraqly dylksrmntv apnltalvge lvgarliahg
      301 gslinlakqp gstvqilgae kalfralktk hstpkygliy haslvgqaap khkgkisrsl
      361 aakaalairc dalgddqdns mglenrakle arlralegke lgrsagsakg kpkievydkd
      421 rkkgaglitp aktynpaads vlsqitntaa lneqdtvpkk kkveaeppqm ekaaevpaie
      481 akkekkkkkk adkeaglptn enepeceept ekekkkhqtk dvenaevgek kkkkrkheeq
      541 edkesevqtk kekkkkkkkt ed
//
LOCUS       XP_016673674             562 aa            linear   PLN 06-AUG-2024
DEFINITION  probable nucleolar protein 5-2 [Gossypium hirsutum].
ACCESSION   XP_016673674
VERSION     XP_016673674.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673674.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..562
                     /product="probable nucleolar protein 5-2"
                     /calculated_mol_wt=61911
     Region          2..66
                     /region_name="NOP5NT"
                     /note="NOP5NT (NUC127) domain; pfam08156"
                     /db_xref="CDD:462382"
     Region          167..394
                     /region_name="Nop"
                     /note="snoRNA binding domain, fibrillarin; pfam01798"
                     /db_xref="CDD:460335"
     CDS             1..562
                     /gene="LOC107893247"
                     /coded_by="XM_016818185.2:185..1873"
                     /db_xref="GeneID:107893247"
ORIGIN      
        1 mlvlfetpag falfkvldeg klnkvedlsk eflapdsark vvslkafskf entaealeaa
       61 tkllesapsk glrkflrahc dgetlgvads klgnaikekl kidcvhnnav mellrgvrtq
      121 ltelisglga qdlapmslgl shslsryklk fsadkvdtmi vqaigllddl dkelntyamr
      181 vrewygwhfp eltkiiqdni myakavklmg dranaakldf sevlpeefet elkeaavism
      241 gteisdldlt nikdlcdqvl nlseyraqly dylksrmntv apnltalvge lvgarliahg
      301 gslinlakqp gstvqilgae kalfralktk hstpkygliy haslvgqaap khkgkisrsl
      361 aakaalairc dalgddqdns mglenrakle arlralegke lgrsagsakg kpkievydkd
      421 rkkgaglitp aktynpaads vlsqitntaa lneqdtvpkk kkveaeppqm ekaaevpaie
      481 akkekkkkkk adkeaglptn enepeceept ekekkkhqtk dvenaevgek kkkkrkheeq
      541 edkesevqtk kekkkkkkkt ed
//
LOCUS       XP_040941477             562 aa            linear   PLN 06-AUG-2024
DEFINITION  probable nucleolar protein 5-2 [Gossypium hirsutum].
ACCESSION   XP_040941477
VERSION     XP_040941477.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085543.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..562
                     /product="probable nucleolar protein 5-2"
                     /calculated_mol_wt=61911
     Region          2..66
                     /region_name="NOP5NT"
                     /note="NOP5NT (NUC127) domain; pfam08156"
                     /db_xref="CDD:462382"
     Region          167..394
                     /region_name="Nop"
                     /note="snoRNA binding domain, fibrillarin; pfam01798"
                     /db_xref="CDD:460335"
     CDS             1..562
                     /gene="LOC107893247"
                     /coded_by="XM_041085543.1:42..1730"
                     /db_xref="GeneID:107893247"
ORIGIN      
        1 mlvlfetpag falfkvldeg klnkvedlsk eflapdsark vvslkafskf entaealeaa
       61 tkllesapsk glrkflrahc dgetlgvads klgnaikekl kidcvhnnav mellrgvrtq
      121 ltelisglga qdlapmslgl shslsryklk fsadkvdtmi vqaigllddl dkelntyamr
      181 vrewygwhfp eltkiiqdni myakavklmg dranaakldf sevlpeefet elkeaavism
      241 gteisdldlt nikdlcdqvl nlseyraqly dylksrmntv apnltalvge lvgarliahg
      301 gslinlakqp gstvqilgae kalfralktk hstpkygliy haslvgqaap khkgkisrsl
      361 aakaalairc dalgddqdns mglenrakle arlralegke lgrsagsakg kpkievydkd
      421 rkkgaglitp aktynpaads vlsqitntaa lneqdtvpkk kkveaeppqm ekaaevpaie
      481 akkekkkkkk adkeaglptn enepeceept ekekkkhqtk dvenaevgek kkkkrkheeq
      541 edkesevqtk kekkkkkkkt ed
//
LOCUS       XP_040941478             565 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase At1g54610 [Gossypium
            hirsutum].
ACCESSION   XP_040941478
VERSION     XP_040941478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085544.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..565
                     /product="probable serine/threonine-protein kinase
                     At1g54610"
                     /calculated_mol_wt=62570
     Region          115..399
                     /region_name="STKc_CDK9_like"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; cd07840"
                     /db_xref="CDD:270832"
     Site            order(121..124,129,142,144,161,175,193..196,199,201..202,
                     239,241,243..244,246,257,260,273,275..278,280,318..319)
                     /site_type="active"
                     /db_xref="CDD:270832"
     Site            order(121..124,129,142,144,175,193..196,199,202,243..244,
                     246,257)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270832"
     Site            order(153..155,157,160,164,167,177..180,182,189)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270832"
     Site            order(161,201,239,241,260,273,275..278,280,318..319)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270832"
     Site            order(256..267,272..280)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270832"
     CDS             1..565
                     /gene="LOC107893250"
                     /coded_by="XM_041085544.1:285..1982"
                     /db_xref="GeneID:107893250"
ORIGIN      
        1 mgcvlgrevs sgivsesres knasfesdkk venvtipkvd asvveveneg tqkeekange
       61 rkqrgerrra kpnpkssnlp khslgeqvaa gwpawlsdac gealngwipr radtfekidk
      121 igsgtysnvy kakdmvtgki valkkvrfdn lepesvkfma reililrrld hpnvvklegl
      181 vtsrmscsly lvfqymehdl aglaaspivk ftepqvkcym hqllsglehc qnrgvlhrdi
      241 kgsnlliddg gvlkiadfgl atffdpnrkh pmtsrvvtlw yrapelllga tdygvgvdlw
      301 sagcilaell agkpimpgrt eveqlhkiyk lcgspsdeyw kksklpnatl fkprepykrr
      361 iketfkdfpp sslpvidtll aidpaerlta taalrsefft tepyacepss lpkyppskem
      421 dakrrddear rlkaaskapg dgarktrtrd rtravpapea naelqsnldr rrlithanak
      481 sksekfppph qdgalgfplg asqhidpscv ppdvpfsttf tyskepiqtw sgplvesasn
      541 galrqkkhva vdshepskpp kgsqk
//
LOCUS       XP_016673678            1206 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HASTY 1 [Gossypium hirsutum].
ACCESSION   XP_016673678
VERSION     XP_016673678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818189.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1206
                     /product="protein HASTY 1"
                     /calculated_mol_wt=133527
     Region          109..269
                     /region_name="Xpo1"
                     /note="Exportin 1-like protein; pfam08389"
                     /db_xref="CDD:462459"
     Region          317..1171
                     /region_name="Exportin-5"
                     /note="Exportin-5 family; pfam19273"
                     /db_xref="CDD:437105"
     CDS             1..1206
                     /gene="LOC107893251"
                     /coded_by="XM_016818189.2:249..3869"
                     /db_xref="GeneID:107893251"
ORIGIN      
        1 meernsnnst vnnvaraiva aldwnstpda rkaavsyies ikagdirvla ntsfllvkkd
       61 wsseirlhaf kmlqhlvrlr weefspserr nflnvavelm seiadpceew alksqtaalv
      121 aevvrregln lwqelfpslv slssngpvqa elvsmmlrwl peditvhned legdrrrlll
      181 rgltqslpei lpllytller hfgealsevg rqhldiakqh aaavtatlna inayaewapl
      241 sdlakfgiih gcgfllsspd frlhaceffk lvsprkrpad dfasefdsam ssifqilmnv
      301 sreflvrsns agraidesdf efaeyvcesm vslgssnlqc ilgdsttssl ylqqmlgffq
      361 hfklalhyqs lqfwlalmrd lmskpklsvh ssgegsaann adsnsvqvdn ekrkilsfln
      421 ddicstildi sfqrmlkkek litgkalslg tlelwsddfe gkgdfgqyrs rlfelikfia
      481 snkplvagak vseriimiik nllnspmpae dlavmesmqv alesvvssif ygsnesaggi
      541 sevhvalcgi fegllrells lnwtepalve vlghyldamg pflkyfsdav gsvinklfel
      601 lnslpfvvkd pstssarhar lqictsfiri akaadksilp hmkgiadtma ylqregrllr
      661 gehnllgeaf lvmasaagvq qqqevlawll eplsqqwiqi ewqnnylsep lglvrlcset
      721 afmwslfhti tffekalkrs gmrkgqssst ssstphpmas hlswmlppll kllraihslw
      781 spsvfqvlpg eikaamsmsd verssllgvg npklskgalt fiegspfdvn kegytepnea
      841 dirnwlkgir dsgynvlgls atigdpffkc tdvdsvalal ieniqsmefr htrqlvhsvl
      901 iplvkscppd mwgvwlekll hplfvhcqqa lscswfgllh egrakvpdnh giltgsdlkv
      961 evmeekllrd ltreicllls tisspglnts lpalehsghv grvdmsslkd ldafapssmv
     1021 gfllkhksla ipvlqislea ftwtdseavt kvcsfsssvv llailtnnad lrefvsrdlf
     1081 salirglale snafisadlv nlcreifiyl cdrdpaprqi llslpcitpn dlhafeealt
     1141 ktaspkeqkq hmrsllllat gnnlkalaaq knvniitnvt arargpvnap gngveegdsv
     1201 glaail
//
LOCUS       XP_016673679             484 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase 8 [Gossypium hirsutum].
ACCESSION   XP_016673679
VERSION     XP_016673679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="glucan endo-1,3-beta-glucosidase 8"
                     /calculated_mol_wt=52557
     Region          28..346
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          368..451
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..484
                     /gene="LOC107893252"
                     /coded_by="XM_016818190.2:601..2055"
                     /db_xref="GeneID:107893252"
ORIGIN      
        1 mgnsgflatl llptflcvnl fggfvdglgv nwgtmathkl ppetvvqmlk dngitkvklf
       61 dadsktmdal sgsdlevmva ipndqllamn sydrakqwvk knittynfkg gvnikyvavg
      121 nepflksyng sfinttvpal qniqnalnda gvgdtikatv plnadvynsp esnpvpsagq
      181 frtdisgpmt qmveflakng apftvniypf lslygnddfp fnyaffdggn pitdngikyt
      241 nvfdanfdtl vsalkavghg dmpiivgevg wptdgdkngn manaqrfyng llprlaantg
      301 tplrpgyiev ylfglideda ksvapgnfer hwgifrydgq pkfpldlsgq nqnkfligak
      361 dvkylqqqwc mfnpnakdig kltdninyac tfsdctalgy gsscnnldan gnasyafnmy
      421 yqvqnqkdma cnfqglgiit tqnisqgacn fiiqiassss sftsvsplmv glaiflvlts
      481 ylli
//
LOCUS       XP_016673680             202 aa            linear   PLN 06-AUG-2024
DEFINITION  TATA-box-binding protein isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673680
VERSION     XP_016673680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..202
                     /product="TATA-box-binding protein isoform X1"
                     /calculated_mol_wt=22438
     Region          23..202
                     /region_name="PLN00062"
                     /note="TATA-box-binding protein; Provisional"
                     /db_xref="CDD:177693"
     CDS             1..202
                     /gene="LOC107893254"
                     /coded_by="XM_016818191.2:451..1059"
                     /db_xref="GeneID:107893254"
ORIGIN      
        1 maeqgglegs qpvdlskhps givptlqniv stvnldckld lkqialqarn aeynpkrfaa
       61 vimrirepkt talifasgkm vctgakseqq sklaarkyar iiqklgfpak fkqdfkiqni
      121 vgscdvkfpi rleglayshg afssyepelf pgliyrmkqp kivllifvsg kivitgakvr
      181 detytafeni ypvltefrkn qq
//
LOCUS       XP_016673681             201 aa            linear   PLN 06-AUG-2024
DEFINITION  TATA-box-binding protein isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673681
VERSION     XP_016673681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..201
                     /product="TATA-box-binding protein isoform X2"
                     /calculated_mol_wt=22310
     Region          23..201
                     /region_name="PLN00062"
                     /note="TATA-box-binding protein; Provisional"
                     /db_xref="CDD:177693"
     CDS             1..201
                     /gene="LOC107893254"
                     /coded_by="XM_016818192.2:450..1055"
                     /db_xref="GeneID:107893254"
ORIGIN      
        1 maeqgglegs qpvdlskhps givptlqniv stvnldckld lkqialqarn aeynpkrfaa
       61 vimrirepkt talifasgkm vctgakseqq sklaarkyar iiqklgfpak fkdfkiqniv
      121 gscdvkfpir leglayshga fssyepelfp gliyrmkqpk ivllifvsgk ivitgakvrd
      181 etytafeniy pvltefrknq q
//
LOCUS       XP_016673682             706 aa            linear   PLN 06-AUG-2024
DEFINITION  casein kinase 1-like protein HD16 [Gossypium hirsutum].
ACCESSION   XP_016673682
VERSION     XP_016673682.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673682.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..706
                     /product="casein kinase 1-like protein HD16"
                     /calculated_mol_wt=78615
     Region          145..419
                     /region_name="STKc_CK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1; cd14016"
                     /db_xref="CDD:270918"
     Site            order(151..157,159,180,182,228..232,234,236,274,276,
                     278..279,281,297,300,324..327)
                     /site_type="active"
                     /db_xref="CDD:270918"
     Site            order(151..157,159,180,182,228..232,276,278..279,281,297)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270918"
     Site            order(155,234,236,274,276,278,300,324..327)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270918"
     Site            order(296..306,310..317,321..327)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270918"
     CDS             1..706
                     /gene="LOC107893255"
                     /coded_by="XM_016818193.2:394..2514"
                     /db_xref="GeneID:107893255"
ORIGIN      
        1 mpelrsgarr skhlddlqpp pqpveqaenw vlpaqnrtrr rvggrgrgna agvakgpsaa
       61 vptrptatgr grgirlidld pepcqvlpqa eplaaagpaf nrvevvadkd iamegrsadk
      121 ivgveeeast tpvpetvqvg nspvyrlerk lgkggfgqvy vgrrtsggsd rigpdaieva
      181 lklehrnskg cnygppyewq vynslngcyg ipsvhykgrq gdfyilvmdm lgpslwdvwn
      241 slgqsmspnm aaciaveais ileklhlkgf vhgdvkpenf llgllgsade kklylidlgl
      301 asrwkdaqsg qhvdydqrpd vfrgtiryas vhahlgrtgs rrddleslay tliflikgrl
      361 pwqgyqgdnk sflvckkkma tspelmccfc papfkqflea vtnmkfdeep nyaklisffe
      421 sliepctplr piridgalkv gqkrgrlvin leedeqpkkk irlgspatqw isvfnarcpm
      481 kqryhynvad srlrqhvekg nedglfiscv asaanlwali mdagtgfssq vyelstvflh
      541 kdwimeqwek nyyissiaga tngsslvvms kgtpytqqsy klsesfpfkw inkkwkegfh
      601 vtsmttagsc wgvvmsrnsg fsdqvveldf lypsegihrr wesgyritsm aatadqaafi
      661 lsipkrkmmd etqetlrtst fpsthvkekw aknlylasic ygrtvc
//
LOCUS       XP_016673683             329 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ homolog subfamily C member 18 [Gossypium hirsutum].
ACCESSION   XP_016673683
VERSION     XP_016673683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..329
                     /product="dnaJ homolog subfamily C member 18"
                     /calculated_mol_wt=37082
     Region          75..201
                     /region_name="DnaJ"
                     /note="DnaJ-class molecular chaperone with C-terminal Zn
                     finger domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0484"
                     /db_xref="CDD:440252"
     CDS             1..329
                     /gene="LOC107893256"
                     /coded_by="XM_016818194.2:94..1083"
                     /db_xref="GeneID:107893256"
ORIGIN      
        1 mqwhllvgpt pihgfppsss fsfianggnp sisaspfsgs wrhpynqhps ehrnrwvppp
       61 sssftpatri ngkqnhytvl gvarnassad ikrayrllar nyhpdvskhs raselfksir
      121 hayevlsnev trirydqtlt fqedvgrsyk gkrnhspkye dgvriyrwae lkrkmqeers
      181 rkryevneey ssfyeetgde adeeslqqgr gsfieviksa fillfllqtf gsqfsltfss
      241 lmalldkkld agykigyvia wvlggrggvl ltlcllfasw vcgktsssvv vlvviamwvg
      301 snlaryaplp qgallallym siklqvdlh
//
LOCUS       XP_016673684              86 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673684
VERSION     XP_016673684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..86
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9524
     CDS             1..86
                     /gene="LOC107893257"
                     /coded_by="XM_016818195.2:265..525"
                     /db_xref="GeneID:107893257"
ORIGIN      
        1 mcplrfllvf lsavlagyvt wrtahsssni dddgggngnv vsedsgkivt iekqefsskr
       61 mvqnafwvfv dmasgkylwr nfknse
//
LOCUS       XP_016673685             393 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein S-acyltransferase 17 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673685
VERSION     XP_016673685.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818196.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673685.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..393
                     /product="probable protein S-acyltransferase 17 isoform
                     X1"
                     /calculated_mol_wt=44692
     Region          155..306
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..393
                     /gene="LOC107893259"
                     /coded_by="XM_016818196.2:354..1535"
                     /db_xref="GeneID:107893259"
ORIGIN      
        1 mslhwalich glitltivvs flcgqwrifq gtpissihrf ltfgayqyfl rfigavfgdr
       61 gtnlilsvey ycwdrpnpil qliylaiigt tyyiivktsf syipgyylse ahryasflai
      121 avgillflvt sfsdpgtvka dnvsrylsay pydniiytek ecptckipkl arskhcslcn
      181 rcvarfdhhc gwmnnciger ntryflafll whfllciygt iaiglvlagr lkelqivhvl
      241 tvyygvdnsl rslapyvvqw lldahntqil lmvfmgvvsl llagffayha nlcltntttn
      301 etfkwqdyis wqkklieara staalkania gmttegkpqe skcksffrrs llqdteaivk
      361 knvydkgffh nlyevvfpvs trasflhtks ksg
//
LOCUS       XP_016673686             351 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein S-acyltransferase 17 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673686
VERSION     XP_016673686.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673686.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..351
                     /product="probable protein S-acyltransferase 17 isoform
                     X2"
                     /calculated_mol_wt=40013
     Region          155..>223
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..351
                     /gene="LOC107893259"
                     /coded_by="XM_016818197.2:354..1409"
                     /db_xref="GeneID:107893259"
ORIGIN      
        1 mslhwalich glitltivvs flcgqwrifq gtpissihrf ltfgayqyfl rfigavfgdr
       61 gtnlilsvey ycwdrpnpil qliylaiigt tyyiivktsf syipgyylse ahryasflai
      121 avgillflvt sfsdpgtvka dnvsrylsay pydniiytek ecptckipkl arskhcslcn
      181 rcvarfdhhc gwmnnciger ntryflafll whfllciygt iaiglvlagr lkelqivhvl
      241 tvyygvdnsl rslapyvvqt fkwqdyiswq kkliearast aalkaniagm ttegkpqesk
      301 cksffrrsll qdteaivkkn vydkgffhnl yevvfpvstr asflhtksks g
//
LOCUS       XP_016673687             223 aa            linear   PLN 06-AUG-2024
DEFINITION  adenylyl-sulfate kinase 3 [Gossypium hirsutum].
ACCESSION   XP_016673687
VERSION     XP_016673687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818198.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="adenylyl-sulfate kinase 3"
                     /calculated_mol_wt=24773
     Region          30..220
                     /region_name="CysC"
                     /note="Adenylylsulfate kinase or related kinase [Inorganic
                     ion transport and metabolism]; COG0529"
                     /db_xref="CDD:440295"
     CDS             1..223
                     /gene="LOC107893260"
                     /coded_by="XM_016818198.2:309..980"
                     /db_xref="GeneID:107893260"
ORIGIN      
        1 mhiyietqkt skelkmstvg nstnifwqes pvgklerqkl lhqkscvvwi tglsgsgkst
       61 lacslsrelf trgnlsyvld gdnlrhglnq dlgfkaedrt enirrvgeva klfadaglic
      121 iaslispyrk drdscramlp danfievfmn mpltlceerd pkglyklara gkikgftgid
      181 dpyepplnce ieikqkagvc ptpgamvgev vtyleekgyl qhq
//
LOCUS       XP_016673688             140 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H2AX [Gossypium hirsutum].
ACCESSION   XP_016673688
VERSION     XP_016673688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..140
                     /product="histone H2AX"
                     /calculated_mol_wt=14648
     Region          3..140
                     /region_name="PLN00156"
                     /note="histone H2AX; Provisional"
                     /db_xref="CDD:215080"
     CDS             1..140
                     /gene="LOC107893261"
                     /coded_by="XM_016818199.2:189..611"
                     /db_xref="GeneID:107893261"
ORIGIN      
        1 msstggstkg grgkpkasks vsrshkaglq fpvgriarfl kagkyaervg agapvylsav
       61 leylaaevle lagnaardnk ktrivprhiq lavrndeels kllgsvtian ggvlpnihqt
      121 llpkkmgkdk geigsasqef
//
LOCUS       XP_016673692             344 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin receptor GID1C isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673692
VERSION     XP_016673692.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673692.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="gibberellin receptor GID1C isoform X1"
                     /calculated_mol_wt=38678
     Region          108..321
                     /region_name="Abhydrolase_3"
                     /note="alpha/beta hydrolase fold; pfam07859"
                     /db_xref="CDD:400284"
     CDS             1..344
                     /gene="LOC107893264"
                     /coded_by="XM_016818203.2:457..1491"
                     /db_xref="GeneID:107893264"
ORIGIN      
        1 marsnevnln eckmvvplnt wvlisnfkla ynllrrpdgt fnrhlaefld rkvpananpv
       61 dgvfsfdvli drgtsllsri yrpttaeepq lniaelekpv maavvpviif fhggsfahss
      121 ansaiydtlc rrlvslckav vvsvnyrrap enrypcaydd gwtalkwvns rpwlqsqkds
      181 kvhiylagds sggniahhva lraiesgidv lgnillnpmf ggqertesek rldgkyfvtl
      241 rdrdwywray lpegedrdhl acnpfgpngr slegikfpks lvvvagldli qdwqlayveg
      301 lkkagqevkl lymeqatigf yllpnnnhfh tvmdeiskfv ssdc
//
LOCUS       XP_016673693             300 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin receptor GID1A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673693
VERSION     XP_016673693.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818204.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673693.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..300
                     /product="gibberellin receptor GID1A isoform X2"
                     /calculated_mol_wt=33595
     Region          64..277
                     /region_name="Abhydrolase_3"
                     /note="alpha/beta hydrolase fold; pfam07859"
                     /db_xref="CDD:400284"
     CDS             1..300
                     /gene="LOC107893264"
                     /coded_by="XM_016818204.2:352..1254"
                     /db_xref="GeneID:107893264"
ORIGIN      
        1 mqefldrkvp ananpvdgvf sfdvlidrgt sllsriyrpt taeepqlnia elekpvmaav
       61 vpviiffhgg sfahssansa iydtlcrrlv slckavvvsv nyrrapenry pcayddgwta
      121 lkwvnsrpwl qsqkdskvhi ylagdssggn iahhvalrai esgidvlgni llnpmfggqe
      181 rtesekrldg kyfvtlrdrd wywraylpeg edrdhlacnp fgpngrsleg ikfpkslvvv
      241 agldliqdwq layveglkka gqevkllyme qatigfyllp nnnhfhtvmd eiskfvssdc
//
LOCUS       XP_016675494             149 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine-containing phosphotransfer protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016675494
VERSION     XP_016675494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820005.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..149
                     /product="histidine-containing phosphotransfer protein 1"
                     /calculated_mol_wt=17103
     Region          44..123
                     /region_name="Hpt"
                     /note="Hpt domain; pfam01627"
                     /db_xref="CDD:426352"
     Site            order(79,82..83,98,101)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238041"
     Site            79
                     /site_type="active"
                     /db_xref="CDD:238041"
     CDS             1..149
                     /gene="LOC107894790"
                     /coded_by="XM_016820005.2:295..744"
                     /db_xref="GeneID:107894790"
ORIGIN      
        1 mdliqlqrql vdyrtslyhe gfldeqftql qslqdennpd fvvevvslff edserllnel
       61 skaleqqiid fkrmdaqvhq lkgssssiga hrvqklcivf rnyceahnve gclkclqqvk
      121 heygiiktkl esmfqleqqi lnaggsipv
//
LOCUS       XP_016673694             999 aa            linear   PLN 06-AUG-2024
DEFINITION  autophagy-related protein 18h isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673694
VERSION     XP_016673694.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673694.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..999
                     /product="autophagy-related protein 18h isoform X1"
                     /calculated_mol_wt=108097
     Region          346..>506
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          392..426
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..492
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          526..756
                     /region_name="BCAS3"
                     /note="Breast carcinoma amplified sequence 3; pfam12490"
                     /db_xref="CDD:463605"
     CDS             1..999
                     /gene="LOC107893265"
                     /coded_by="XM_016818205.2:413..3412"
                     /db_xref="GeneID:107893265"
ORIGIN      
        1 mksngnignn kgsniinnrt nshnnnrylp islkfissci ktassgvrsa sasvaasisg
       61 dshelqkdqv lwtsfdrlel gpssfervll lgysngfqvl dvedasnvne lvsrrddpvt
      121 flqmqplpek seghegfras hplllvvacd eskgsglmrt grdgltrdgf dgpqtgnvli
      181 sptavrfysl rshnyvhvlr frstvytvrc spriiavgla tqiycfdalt lenkfsilty
      241 pvpqaggqgm vgisigygpm avgprwlaya snnplqsntg rlspqnlsps pgvspstsps
      301 sgslvaryam esskqlaagl inlgdmgyrt lskyyqdltp dgsgspvssh sgwkvgraas
      361 haaetdiagt vvvkdyvtra visqfrahts pisalcfdps gtllvtasih gnninifrim
      421 psstkngsgs qsydwssshv hlyklhrgmt saviqdicfs pfsqwiaivs srgtchifvl
      481 spfggenvlq iqnshvdgpi lspavslpww stpsfviysq tfsippptvt lsvvsrikng
      541 nswlntvtna assvagkasf psgafsavfh nslpndvqqa qmktnilehl lvytpsghvv
      601 qykllpsfrg eagenasrig pgsapqvqde elrvkvetmq lqawdvcrrt dwpereecls
      661 gmthgrkeal emkvdgsdse nndaghndls kaqdrshlyl snaevqissg ripvwqnskv
      721 sfytmspvgf eeqkftadqs ggeieleqmp aheveirqkd llpvfehfhr lqsewnrgfg
      781 gekypvssed akarfsqvtv ishsklmsps svensdsgst rssypsgiqs gkdddgvkgq
      841 nsvlastmln qgnlnkdags asfnqskvgv chiedtnstn smssltsgsl sggrtvakev
      901 qfpnsdgtsd vsntssnrsd lsmnmldegp vnesqdfeqf fqeeyckalp lsacsepkkv
      961 itdvdnsisp cdrekseeev dnddmlggvf afseegsfg
//
LOCUS       XP_040941480             960 aa            linear   PLN 06-AUG-2024
DEFINITION  autophagy-related protein 18h isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941480
VERSION     XP_040941480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085546.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..960
                     /product="autophagy-related protein 18h isoform X2"
                     /calculated_mol_wt=104029
     Region          <330..435
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          353..387
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          415..453
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          487..717
                     /region_name="BCAS3"
                     /note="Breast carcinoma amplified sequence 3; pfam12490"
                     /db_xref="CDD:463605"
     CDS             1..960
                     /gene="LOC107893265"
                     /coded_by="XM_041085546.1:375..3257"
                     /db_xref="GeneID:107893265"
ORIGIN      
        1 mksngnignn kgsniinnrt nshnnnrylp islkfissci ktassgvrsa sasvaasisg
       61 dshelqkdqv lwtsfdrlel gpssfervll lgysngfqvl dvedasnvne lvsrrddpvt
      121 flqmqplpek seghegfras hplllvvacd eskgsglmrt grdgltrdgf dgpqtgnvli
      181 sptavrfysl rshnyvhvlr frstvytvrc spriiavgla tqiycfdalt lenkfsilty
      241 pvpqaggqgm vgisigygpm avgprwlaya snnplqsntg rlspqnlsps pgvspstsps
      301 sgslvaryam esswkvgraa shaaetdiag tvvvkdyvtr avisqfraht spisalcfdp
      361 sgtllvtasi hgnninifri mpsstkngsg sqsydwsssh vhlyklhrgm tsaviqdicf
      421 spfsqwiaiv ssrgtchifv lspfggenvl qiqnshvdgp ilspavslpw wstpsfviys
      481 qtfsippptv tlsvvsrikn gnswlntvtn aassvagkas fpsgafsavf hnslpndvqq
      541 aqmktnileh llvytpsghv vqykllpsfr geagenasri gpgsapqvqd eelrvkvetm
      601 qlqawdvcrr tdwpereecl sgmthgrkea lemkvdgsds enndaghndl skaqdrshly
      661 lsnaevqiss gripvwqnsk vsfytmspvg feeqkftadq sggeieleqm paheveirqk
      721 dllpvfehfh rlqsewnrgf ggekypvsse dakarfsqvt vishsklmsp ssvensdsgs
      781 trssypsgiq sgkdddgvkg qnsvlastml nqgnlnkdag sasfnqskvg vchiedtnst
      841 nsmssltsgs lsggrtvake vqfpnsdgts dvsntssnrs dlsmnmldeg pvnesqdfeq
      901 ffqeeyckal plsacsepkk vitdvdnsis pcdrekseee vdnddmlggv fafseegsfg
//
LOCUS       XP_016673696            1122 aa            linear   PLN 06-AUG-2024
DEFINITION  phytochrome A [Gossypium hirsutum].
ACCESSION   XP_016673696
VERSION     XP_016673696.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818207.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673696.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1122
                     /product="phytochrome A"
                     /calculated_mol_wt=124447
     Region          65..181
                     /region_name="PAS_2"
                     /note="PAS fold; pfam08446"
                     /db_xref="CDD:400652"
     Region          215..407
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          409..583
                     /region_name="PHY"
                     /note="Phytochrome region; pfam00360"
                     /db_xref="CDD:425635"
     Region          617..731
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          746..870
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          888..1117
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          1003..1114
                     /region_name="HATPase_Phy-like"
                     /note="Histidine kinase-like ATPase domain of plant
                     phytochromes similar to Arabidopsis thaliana Phytochrome
                     A, B, C, D and E; cd16932"
                     /db_xref="CDD:340409"
     Site            order(1015,1019,1022,1054,1056,1058,1060..1061,1080..1083,
                     1099,1101,1105..1106,1108)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340409"
     Site            order(1067,1083)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340409"
     CDS             1..1122
                     /gene="LOC107893266"
                     /coded_by="XM_016818207.2:160..3528"
                     /db_xref="GeneID:107893266"
ORIGIN      
        1 msssrhshss nnpgrsrhga riiaqttvda kfhadfeesg ssfdysstvr vigdqqprsd
       61 nvttaylhni qkgkfiqpfg cllaldekty kviaysenap emltmvshav psvgdhpvlg
      121 igtdirtift apsssallka lgigevslln pilvhcktsg kpfyaiihrv tggliidfep
      181 vkpsevpmta agalqsykla akaitrlqsl psgsmerlcd tmvqevfelt gydrvmtykf
      241 hdddhgevvs eitkpglepy lglhypatdi pqaarflfmk nkvrmivdcr akhvqvfqdd
      301 klpmdltlcg stlraphsch lqymenmnsi aslvmavivn dgdeegdgtn seqpqqkrkr
      361 lwglvvchnt tprfvpfplr yaceflaqvf avhvnkelel esqiveknil rtqtllcdml
      421 mrdapvgivs qspnimdlvk cdgaallykn kiwklgatps dfqlneialw lseyhmdstg
      481 lstdslydag fpgalalgdv vcgmaavrit pkdmlfwfrs ptaaeirwgg akhepgvkdd
      541 drkmhprssf kaflevvktr sfpwkdyemd aihslqlilr nafkdvettd tntnaiyskl
      601 gdlrlegmqe leavtsemvr lietatvpil avdvdglvng wnmkiaeltg lsvdnaigkh
      661 lltlvedsss etvqkmlfma lqgkeekniq feikthgsrt eagpislivn acvnrdlqes
      721 vvgvcfvaqd vtvqkivmdk ftkiegdyka ivhnpnplip pifgmdefgw csewnpamtk
      781 ltcwnrdevv dkmllgevfg tntaccrlkn qesfvnlsvv lnnavtgnep ekvpfgffar
      841 sgkyvecllc vnkkldmegg avsgvfcflq lpshelqqal hiqklseqta vkrlkalayl
      901 ktqirnplsg iifsrkmmed telrpeqkrl lqtssmcqrq lskilddsdl ssiidgyldl
      961 emieftlndv liasisqvmm kstgkgiril netaeevmee tlygdgvrlq qvladfllvs
     1021 vnfapkggql rvvasvtkdq lgrsvhlarl hlrithvggg ipeallnqmf etdgdateeg
     1081 isllisrklv klmngdiqyl reagrstfii tielaaanms rn
//
LOCUS       XP_016673695            1122 aa            linear   PLN 06-AUG-2024
DEFINITION  phytochrome A [Gossypium hirsutum].
ACCESSION   XP_016673695
VERSION     XP_016673695.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818206.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673695.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1122
                     /product="phytochrome A"
                     /calculated_mol_wt=124447
     Region          65..181
                     /region_name="PAS_2"
                     /note="PAS fold; pfam08446"
                     /db_xref="CDD:400652"
     Region          215..407
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          409..583
                     /region_name="PHY"
                     /note="Phytochrome region; pfam00360"
                     /db_xref="CDD:425635"
     Region          617..731
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          746..870
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          888..1117
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          1003..1114
                     /region_name="HATPase_Phy-like"
                     /note="Histidine kinase-like ATPase domain of plant
                     phytochromes similar to Arabidopsis thaliana Phytochrome
                     A, B, C, D and E; cd16932"
                     /db_xref="CDD:340409"
     Site            order(1015,1019,1022,1054,1056,1058,1060..1061,1080..1083,
                     1099,1101,1105..1106,1108)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340409"
     Site            order(1067,1083)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340409"
     CDS             1..1122
                     /gene="LOC107893266"
                     /coded_by="XM_016818206.2:416..3784"
                     /db_xref="GeneID:107893266"
ORIGIN      
        1 msssrhshss nnpgrsrhga riiaqttvda kfhadfeesg ssfdysstvr vigdqqprsd
       61 nvttaylhni qkgkfiqpfg cllaldekty kviaysenap emltmvshav psvgdhpvlg
      121 igtdirtift apsssallka lgigevslln pilvhcktsg kpfyaiihrv tggliidfep
      181 vkpsevpmta agalqsykla akaitrlqsl psgsmerlcd tmvqevfelt gydrvmtykf
      241 hdddhgevvs eitkpglepy lglhypatdi pqaarflfmk nkvrmivdcr akhvqvfqdd
      301 klpmdltlcg stlraphsch lqymenmnsi aslvmavivn dgdeegdgtn seqpqqkrkr
      361 lwglvvchnt tprfvpfplr yaceflaqvf avhvnkelel esqiveknil rtqtllcdml
      421 mrdapvgivs qspnimdlvk cdgaallykn kiwklgatps dfqlneialw lseyhmdstg
      481 lstdslydag fpgalalgdv vcgmaavrit pkdmlfwfrs ptaaeirwgg akhepgvkdd
      541 drkmhprssf kaflevvktr sfpwkdyemd aihslqlilr nafkdvettd tntnaiyskl
      601 gdlrlegmqe leavtsemvr lietatvpil avdvdglvng wnmkiaeltg lsvdnaigkh
      661 lltlvedsss etvqkmlfma lqgkeekniq feikthgsrt eagpislivn acvnrdlqes
      721 vvgvcfvaqd vtvqkivmdk ftkiegdyka ivhnpnplip pifgmdefgw csewnpamtk
      781 ltcwnrdevv dkmllgevfg tntaccrlkn qesfvnlsvv lnnavtgnep ekvpfgffar
      841 sgkyvecllc vnkkldmegg avsgvfcflq lpshelqqal hiqklseqta vkrlkalayl
      901 ktqirnplsg iifsrkmmed telrpeqkrl lqtssmcqrq lskilddsdl ssiidgyldl
      961 emieftlndv liasisqvmm kstgkgiril netaeevmee tlygdgvrlq qvladfllvs
     1021 vnfapkggql rvvasvtkdq lgrsvhlarl hlrithvggg ipeallnqmf etdgdateeg
     1081 isllisrklv klmngdiqyl reagrstfii tielaaanms rn
//
LOCUS       XP_016673697             348 aa            linear   PLN 06-AUG-2024
DEFINITION  AP2/ERF and B3 domain-containing transcription factor At1g50680
            [Gossypium hirsutum].
ACCESSION   XP_016673697
VERSION     XP_016673697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..348
                     /product="AP2/ERF and B3 domain-containing transcription
                     factor At1g50680"
                     /calculated_mol_wt=39771
     Region          43..101
                     /region_name="AP2"
                     /note="DNA-binding domain found in transcription
                     regulators in plants such as APETALA2 and EREBP (ethylene
                     responsive element binding protein). In EREBPs the domain
                     specifically binds to the 11bp GCC box of the ethylene
                     response element (ERE), a promotor...; cd00018"
                     /db_xref="CDD:237985"
     Site            order(46..47,49,51,53,55,59,61,66,68,71)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     Region          166..261
                     /region_name="B3"
                     /note="B3 DNA binding domain; pfam02362"
                     /db_xref="CDD:396783"
     Site            order(168,171,179,182,184,228,239,241..242,244..245)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..348
                     /gene="LOC107893268"
                     /coded_by="XM_016818208.2:1..1047"
                     /db_xref="GeneID:107893268"
ORIGIN      
        1 meeeipsvis sggantnsdv sdsistthqa nkrrrcggkg nssqfkgvmr qkngqwgaql
       61 ytnhtriwlg tfkteidaav aydsaaikfr pgdthrnfpw neitieepkf lshysaeaal
      121 smirdgsyqy kfmdfikars rsikpnialn smgtnsnegl ickqlfqkel tpsdvgklnr
      181 lviprkyavk yfppvswtek enadigdrkt ndvelvfydk fmriwkfryc ywnssqsfvf
      241 trgwnrflke kelkandvvs fficecrken evrrfcmida nksgnggtfm avntvhvgie
      301 vdlqlrlghy ypigdekhvq eeqgsmaaak qkqddktegf klfgmqin
//
LOCUS       XP_016673699             243 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673699
VERSION     XP_016673699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..243
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26225
     Region          1..243
                     /region_name="PLN03152"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178697"
     CDS             1..243
                     /gene="LOC107893269"
                     /coded_by="XM_016818210.2:52..783"
                     /db_xref="GeneID:107893269"
ORIGIN      
        1 malllssslh pptsplnpkl nslstplsna vitkrqliin tttsfsiifg aqqnpvpqcl
       61 aqpsnpskps alniantkaw fqfygdgfai rvppefedim epedfnagas lygdkakprp
      121 faarfastdg sevlsvvirp tnqlkitfle aqeitdlgsi kdaakifvpg gatlynarti
      181 kikedegfkt yyfyefgrde qhiaimatvn ggkaiiagtt apqskwdddg vklrsaaisl
      241 tvl
//
LOCUS       XP_016673698             243 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673698
VERSION     XP_016673698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..243
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26225
     Region          1..243
                     /region_name="PLN03152"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178697"
     CDS             1..243
                     /gene="LOC107893269"
                     /coded_by="XM_016818209.2:109..840"
                     /db_xref="GeneID:107893269"
ORIGIN      
        1 malllssslh pptsplnpkl nslstplsna vitkrqliin tttsfsiifg aqqnpvpqcl
       61 aqpsnpskps alniantkaw fqfygdgfai rvppefedim epedfnagas lygdkakprp
      121 faarfastdg sevlsvvirp tnqlkitfle aqeitdlgsi kdaakifvpg gatlynarti
      181 kikedegfkt yyfyefgrde qhiaimatvn ggkaiiagtt apqskwdddg vklrsaaisl
      241 tvl
//
LOCUS       XP_016673701             106 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 1 [Gossypium hirsutum].
ACCESSION   XP_016673701
VERSION     XP_016673701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="sugar transporter ERD6-like 1"
                     /calculated_mol_wt=11046
     Region          53..>100
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..106
                     /gene="LOC107893270"
                     /coded_by="XM_016818212.2:47..367"
                     /db_xref="GeneID:107893270"
ORIGIN      
        1 mnfiininst egnkkmveeg tdegptnepl ivssyngdgl tsrksspitp slvlgvtvaa
       61 nasftcgysg rysapaesgi idelgltvae csvfgsiiti eewqvq
//
LOCUS       XP_040941481             106 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 1 [Gossypium hirsutum].
ACCESSION   XP_040941481
VERSION     XP_040941481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085547.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..106
                     /product="sugar transporter ERD6-like 1"
                     /calculated_mol_wt=11046
     Region          53..>100
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..106
                     /gene="LOC107893270"
                     /coded_by="XM_041085547.1:105..425"
                     /db_xref="GeneID:107893270"
ORIGIN      
        1 mnfiininst egnkkmveeg tdegptnepl ivssyngdgl tsrksspitp slvlgvtvaa
       61 nasftcgysg rysapaesgi idelgltvae csvfgsiiti eewqvq
//
LOCUS       XP_040941482             474 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 8 [Gossypium hirsutum].
ACCESSION   XP_040941482
VERSION     XP_040941482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085548.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..474
                     /product="sugar transporter ERD6-like 8"
                     /calculated_mol_wt=51145
     Region          41..468
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(54,58,172,175..176,179,286..287,291..292,295..296,
                     320,385..386,389..390,394,417..418,421)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..474
                     /gene="LOC107894441"
                     /coded_by="XM_041085548.1:35..1459"
                     /db_xref="GeneID:107894441"
ORIGIN      
        1 mkmadsqdie igssgslyqp ffhkdekqqn shdngnlfmv ifctfvavmg sfefgssigy
       61 ssptqqgime elgmsseeys mfgsiltiga mvgsiscgra adligrkgtm kmssiisiag
      121 wliiylslgp lsldvgrflt gygigvnsyv vpvfiaeitp thlrgalltv hqvaistgll
      181 vaytvgafvs wrtlaltgmi pcavmilgly fipdsprwla mvgcqaefna alqklrgdta
      241 dvsreeaaie eslvtlqhlp katvldlfle rnlrlviigv glmvfqqfsg yngvvfyanq
      301 iftsagvppn vgsilyaclq iivlllgavi idkagrrpll misasgmllg slltgasfgl
      361 kehalvsdmg pmftiigimi ymgsyclglg gipwivmsei fplhikgiag slvtlvswgg
      421 swvvsftfsf lmdwnsygtf lmfaifcvva ivfiwklvpe tkgrtleeiq asme
//
LOCUS       XP_016675495             289 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH94 [Gossypium hirsutum].
ACCESSION   XP_016675495
VERSION     XP_016675495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820006.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="transcription factor bHLH94"
                     /calculated_mol_wt=32470
     Region          108..>167
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(114..115,117,122,141..142)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(120..121,124..125,127..128,132,142..143,146..147,
                     150,152..153,156..157)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..289
                     /gene="LOC107894792"
                     /coded_by="XM_016820006.2:165..1034"
                     /db_xref="GeneID:107894792"
ORIGIN      
        1 mameavvfqq dwfgyngkdv llggnwsygl glglgkeeek fcfkhipgnq tsdtnnlvdg
       61 dhrvssssqt smapplphss gpsavgrrkr rrstkapknk eeienqrmth itvernrrkq
      121 mnqylsvlrs lmppsyaqrg dqasiiggsi nfvkeleqrl qwlsgqkelk eerpkfddff
      181 tspqystpig dievnvneth anlkirwkrr psllfrlvsg lnamrltilh lnvttaaliv
      241 lysltlkved dcklttvdgi asavnqllcr iedddgddam fnsfnsilp
//
LOCUS       XP_016673702             384 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase ATL6 [Gossypium hirsutum].
ACCESSION   XP_016673702
VERSION     XP_016673702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..384
                     /product="E3 ubiquitin-protein ligase ATL6"
                     /calculated_mol_wt=41839
     Region          <94..242
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          129..172
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            157..162
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..384
                     /gene="LOC107893272"
                     /coded_by="XM_016818213.2:160..1314"
                     /db_xref="GeneID:107893272"
ORIGIN      
        1 msytahhgii sfhfhffvll llmspppsta qvqptspnde qysyarfsps laiivvvlia
       61 alfflgifsi yirncsessa ngssvnpvng gagrsrrgar gleasvietf ptmiysevkv
      121 hkigkgalec avclnefedd etlrlipkcd hvfhpecida wlashttcpv cranlapqpg
      181 dsgvsqptel netateidle apndssdsem egeerrinnn nvssdveggv apevevvdln
      241 ktlnrnrtrg sissrtrkff fprshstghs lvqpgentdr ftlrlpadvr nqlmnrklnr
      301 atslvlpkek gsrpgedggs srgkssirln kmdrgvksdr wlfsmsrsff srassvrspk
      361 vtndgegtss lpagptvgss rpqv
//
LOCUS       XP_016673704             429 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL7 [Gossypium hirsutum].
ACCESSION   XP_016673704
VERSION     XP_016673704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818215.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..429
                     /product="probable serine/threonine-protein kinase PBL7"
                     /calculated_mol_wt=47581
     Region          146..416
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(146..150,154,166,168,197,213..216,220,222,266,268,
                     270..271,273,284,287,305..308)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(146..150,154,166,168,197,213..216,220,266,268,
                     270..271,273,284)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(150,220,222,266,268,270,287,305..308)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(283..290,301..308)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..429
                     /gene="LOC107893274"
                     /coded_by="XM_016818215.2:281..1570"
                     /db_xref="GeneID:107893274"
ORIGIN      
        1 medsitsata tspamstpkn hthhrfhsvp qhkpnlsfns fviiiasiis ilvvfaifll
       61 ivmfrrlksv rkhddscnes gsinngtssr fiahttisln cspdvkarcl yggsirtpps
      121 ryggvqvfty kelelatdkf seanvisngg lgvmykgvle dgtmaaikrl hrdgkqgerg
      181 frmevdllsr lscpylvkll gycadqhhri liyefmpsgn lqqhlhhpsn qhrpldwgnr
      241 liialdcarg leflhehasp tvihrdfkcs nilldenlra kvsnfglakm gsdkingqil
      301 trvlgttgyl apeyaskgkl ttksdvysyg vvllqlltgr vpvdikrppg ehvlvswalp
      361 rltnrekide mvdpaiqgqy skkdliqvaa iaamcvqpaa dyrplmvdvv qsliplvknf
      421 nssasirfh
//
LOCUS       XP_016673705             400 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA excision repair protein ERCC-1 [Gossypium hirsutum].
ACCESSION   XP_016673705
VERSION     XP_016673705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818216.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..400
                     /product="DNA excision repair protein ERCC-1"
                     /calculated_mol_wt=43707
     Region          109..236
                     /region_name="ERCC1_C-like"
                     /note="Central domain of ERCC1; cd22325"
                     /db_xref="CDD:411729"
     Site            order(127..129,176,189,193,196,199..200,203..208,210,214,
                     217..218,220..222,224..226,228..229,231..232)
                     /site_type="other"
                     /note="XPF interaction interface [polypeptide binding]"
                     /db_xref="CDD:411729"
     Region          <267..304
                     /region_name="MUS81"
                     /note="ERCC4-type crossover junction endonuclease
                     [Replication, recombination and repair]; COG1948"
                     /db_xref="CDD:441551"
     CDS             1..400
                     /gene="LOC107893275"
                     /coded_by="XM_016818216.2:70..1272"
                     /db_xref="GeneID:107893275"
ORIGIN      
        1 mekdeenqnk kktqivigip sykeviessq tkstppslft psqsfsqafn fikssefytp
       61 pppppapssp lstprptgga nvpssssaas tsaspaaaaa sstssqsrna ilvshrqkgn
      121 pllkhirnvr wafadvacdy llgqntcaly lslryhllhp dylyyrirel qknfklrvvl
      181 chvdvedvvk pllevtktal lhdctllcgw sleecgryle tikvyenkpa dliqgqmdtd
      241 ylsrlnhalt tvrrvnktdv vtlgstfgsl ssimdasled larcpgiger kvkrlhdtfh
      301 epfkrivssn psipetpvck daepssasev ieadkytedt skrrkkenei niksaltaaf
      361 akcagknskm nnksegnkgg gtaaavpepa tktsgeevet
//
LOCUS       XP_016673706             283 aa            linear   PLN 06-AUG-2024
DEFINITION  protein YIPF1 homolog [Gossypium hirsutum].
ACCESSION   XP_016673706
VERSION     XP_016673706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818217.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..283
                     /product="protein YIPF1 homolog"
                     /calculated_mol_wt=30785
     Region          106..264
                     /region_name="Yip1"
                     /note="Yip1 domain; pfam04893"
                     /db_xref="CDD:461468"
     CDS             1..283
                     /gene="LOC107893276"
                     /coded_by="XM_016818217.2:176..1027"
                     /db_xref="GeneID:107893276"
ORIGIN      
        1 mmsggytsid nqkvsgsvpa vsdpshvavk ftdsnlqtfp psgaqgkisg gtqpphdadd
       61 tfskpgggsq pgsgepqgsg wfrtftiaay kpyfdvdtsd iidrlkeslf pfrgtftekt
      121 atnpdlygpf wicttlifva asigtfvtyi ahklkkkewd ydinlvtwsa gvfygyvtvv
      181 plilyvilky fsapsglvql fclygyslfv fipalclsvv pleifrwvia gvagfmsatf
      241 valnlkahin sagerwfliv tgifllqlal avvlklylft vtv
//
LOCUS       XP_016673707             323 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxisomal adenine nucleotide carrier 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673707
VERSION     XP_016673707.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818218.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673707.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="peroxisomal adenine nucleotide carrier 1 isoform
                     X1"
                     /calculated_mol_wt=35283
     Region          4..99
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          109..189
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          203..298
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..323
                     /gene="LOC107893277"
                     /coded_by="XM_016818218.2:155..1126"
                     /db_xref="GeneID:107893277"
ORIGIN      
        1 mgvdlesise assgaigsll sttilypldt cktkyqaevq thgqrkyrnl sdvlweavst
       61 gqvlslyqgl gtknlqsfia qfvyfygysy fkrlylensg sksigtkvnl ilaagagact
      121 aivtqpldta ssrmqtsafg kskglwktlt egtlsdafdg lgisllltsn paiqytvfdq
      181 lkqrllkqkl kkadhdsspv vqsaftaffl gaisksiatf ltypairckv miqaadpedd
      241 ddddktkraq sksrktvsgv vsaiwrregi lgffkgldaq itktmlssal llmikekita
      301 itwvlilair rslllrngrl knv
//
LOCUS       XP_016673708             296 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxisomal adenine nucleotide carrier 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673708
VERSION     XP_016673708.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818219.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673708.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..296
                     /product="peroxisomal adenine nucleotide carrier 1 isoform
                     X2"
                     /calculated_mol_wt=32535
     Region          82..162
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          176..271
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..296
                     /gene="LOC107893277"
                     /coded_by="XM_016818219.2:272..1162"
                     /db_xref="GeneID:107893277"
ORIGIN      
        1 mvnentvhhe vlgsqflily rnlsdvlwea vstgqvlsly qglgtknlqs fiaqfvyfyg
       61 ysyfkrlyle nsgsksigtk vnlilaagag actaivtqpl dtassrmqts afgkskglwk
      121 tltegtlsda fdglgislll tsnpaiqytv fdqlkqrllk qklkkadhds spvvqsafta
      181 fflgaisksi atfltypair ckvmiqaadp eddddddktk raqsksrktv sgvvsaiwrr
      241 egilgffkgl daqitktmls salllmikek itaitwvlil airrslllrn grlknv
//
LOCUS       XP_016673709              86 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S27-2 [Gossypium hirsutum].
ACCESSION   XP_016673709
VERSION     XP_016673709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818220.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..86
                     /product="40S ribosomal protein S27-2"
                     /calculated_mol_wt=9455
     Region          1..86
                     /region_name="PLN00209"
                     /note="ribosomal protein S27; Provisional"
                     /db_xref="CDD:165774"
     CDS             1..86
                     /gene="LOC107893279"
                     /coded_by="XM_016818220.2:174..434"
                     /db_xref="GeneID:107893279"
ORIGIN      
        1 mvlqndidll nppaelekkk hklkrlvqsp nsffmdvkcq gcfnittvfs hsqtvvvcgn
       61 cqtvlcqptg grarltegcs frkkgd
//
LOCUS       XP_016675496             136 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-4 [Gossypium hirsutum].
ACCESSION   XP_016675496
VERSION     XP_016675496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820007.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..136
                     /product="nuclear transcription factor Y subunit B-4"
                     /calculated_mol_wt=15084
     Region          2..92
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(2,4..5,8,34,37..38,42,45..46,49..50,53,73..75,77)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(5..10,13,17..18,21..23,26..29,32,35..36,39..44,
                     46..49,52,61..65,68,72,76..77,80,84,87,91..92)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(5,10..13,16,19,27..30,33,61..62)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..136
                     /gene="LOC107894793"
                     /coded_by="XM_016820007.2:150..560"
                     /db_xref="GeneID:107894793"
ORIGIN      
        1 mvdgqerllp ianvgrimkq ilppsakvsk eakqtlqeca tefisfvtge asdkcrkenr
       61 ktvngddicw algalgfdny adaivrylhk yreverdkat qnkatcissq dkdeessedk
      121 snqpphqqae apstrv
//
LOCUS       XP_016673711             671 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-CoA-binding domain-containing protein 4 [Gossypium hirsutum].
ACCESSION   XP_016673711
VERSION     XP_016673711.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673711.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..671
                     /product="acyl-CoA-binding domain-containing protein 4"
                     /calculated_mol_wt=73219
     Region          12..96
                     /region_name="ACBP"
                     /note="Acyl CoA binding protein; pfam00887"
                     /db_xref="CDD:459982"
     Site            order(18,21,32,34,37..38,40,43..44,46..47,50..51,68..69,
                     72..73,92)
                     /site_type="other"
                     /note="acyl-CoA binding pocket [chemical binding]"
                     /db_xref="CDD:238248"
     Site            order(32,47,50..51,73,92)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:238248"
     Region          181..425
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          184..284
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          244..285
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          295..342
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          346..394
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          397..439
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          525..>651
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..671
                     /gene="LOC107893281"
                     /coded_by="XM_016818222.2:167..2182"
                     /db_xref="GeneID:107893281"
ORIGIN      
        1 marassglay perfyaaaay vgfdgspnsn dkdigsrfsn dvalilyaly qqatvgpcnv
       61 pkpslwnpve qgkwkswkql gnmvsaeamr lfvkileeee pgwysrasns vlepvtdvqm
      121 nhnaivepii enrnsfaerk tisaenggli etqdidvvse glgsvvvydq wtsppitgqc
      181 pkgryehaaa vvedkmyiyg gnhngrylsd lhvldlrsct wskveakves ksverpspvn
      241 itpsaghsli pwenkllsia ghtkdpsetf qvkafdlqig twsmlntygk ppvsrggqsv
      301 tlvgttlvif ggqdakqtll ndlhildlet ltwdeidavg vppsprsgha aavhaeryll
      361 ifgggshatc fndlhvldlq tmewsrptqq geipvpragh agvtvgenwf ivgggdnksg
      421 asetvvlnms tlawsvvtsv egrvplaseg lslvvgslng edilisfggy nghynsevnv
      481 lkpshkstlq skimegpvpd svsavhnatn ptrdlesefe vgqegkiret aidnfepmks
      541 kggetsehil amlkaekeel esslnnekll slqlkqelad aearntdlyk elqsvrgqla
      601 seqsrcfkle vdvaelrqkq qtmetlqrel ellqrqkats eqvainakqr qgsggvwgwl
      661 agrtpqnadd a
//
LOCUS       XP_016673712              82 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S21 [Gossypium hirsutum].
ACCESSION   XP_016673712
VERSION     XP_016673712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..82
                     /product="40S ribosomal protein S21"
                     /calculated_mol_wt=9128
     Region          1..77
                     /region_name="Ribosomal_S21e"
                     /note="Ribosomal protein S21e; pfam01249"
                     /db_xref="CDD:460133"
     CDS             1..82
                     /gene="LOC107893282"
                     /coded_by="XM_016818223.2:225..473"
                     /db_xref="GeneID:107893282"
ORIGIN      
        1 mqneegqnmd lyiprkcsat nrlitskdha svqinvghld elgrytgtfs tfalcgfvra
       61 qgdadsaldr lwqkkkaevr qq
//
LOCUS       XP_016673713             440 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RFI2 [Gossypium hirsutum].
ACCESSION   XP_016673713
VERSION     XP_016673713.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673713.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..440
                     /product="E3 ubiquitin-protein ligase RFI2"
                     /calculated_mol_wt=47370
     Region          43..88
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(43,46,63,65,68,71,84,87)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..440
                     /gene="LOC107893283"
                     /coded_by="XM_016818224.2:507..1829"
                     /db_xref="GeneID:107893283"
ORIGIN      
        1 mglgsngged vvvddsdggg gggdggdgvd cenggksfgs vscsicletv tdngdrswak
       61 lqcghqfhld cigsafnvkg amqcpncrki ekgqwlyang crsypefnvd dlthdedlyd
      121 lsysemsfgv hwcpfgslar lpsfevgefs stsyhellgq qaifaehsas aghpcpyvay
      181 fgptvhpsss nsggsvsdss sfnghwngps vpsemptsya fpamdlhyhs wehqstpfst
      241 fssrigssdq ppnppinqrs trsssdtprs asfmhpfvvg hssgaragss vapslippyp
      301 gsnarardrv qalqayyqqh pstsptirtp ivsgsrrssg hrshaqagpa asssdqvggf
      361 yfipsgtsgr nfqeaenrls trfhpwerdh lspfslnqvd telgwnrfhq satgapdpgi
      421 rsssfrqrhr sermqsqnhs
//
LOCUS       XP_016673715             298 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR30 [Gossypium hirsutum].
ACCESSION   XP_016673715
VERSION     XP_016673715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..298
                     /product="serine/arginine-rich splicing factor SR30"
                     /calculated_mol_wt=33758
     Region          7..78
                     /region_name="RRM1_SF2_plant_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     pre-mRNA-splicing factor SF2 and similar proteins;
                     cd12599"
                     /db_xref="CDD:410011"
     Region          109..184
                     /region_name="RRM2_SF2_plant_like"
                     /note="RNA recognition motif 2 (RRM2) found in plant
                     pre-mRNA-splicing factor SF2 and similar proteins;
                     cd12602"
                     /db_xref="CDD:410014"
     CDS             1..298
                     /gene="LOC107893284"
                     /coded_by="XM_016818226.2:303..1199"
                     /db_xref="GeneID:107893284"
ORIGIN      
        1 mgrssrtlyv gnlpgdtrlr evedlfykyg pivdidlkip prppgyafve fedphdaeda
       61 irgrdgydfd gyylrvelah ggrrpsssvd rhssysgsss rgpsrrtdyr vlvtglpssa
      121 swqdlkdhmr kagdvcfsqv frdrggmtgi vdytnyddmk yairklddse frnafsrayi
      181 rvkeydskyd srrsysrsrs pysrspsrsc syssrsrsrs ksprarytsq spsvsrsvsp
      241 cshsvspars nsrsrsisrs ptpsprskhe srtppnrsps wsrscrlsrs rspsvksd
//
LOCUS       XP_040941486             298 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR30 [Gossypium hirsutum].
ACCESSION   XP_040941486
VERSION     XP_040941486.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085552.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..298
                     /product="serine/arginine-rich splicing factor SR30"
                     /calculated_mol_wt=33758
     Region          7..78
                     /region_name="RRM1_SF2_plant_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     pre-mRNA-splicing factor SF2 and similar proteins;
                     cd12599"
                     /db_xref="CDD:410011"
     Region          109..184
                     /region_name="RRM2_SF2_plant_like"
                     /note="RNA recognition motif 2 (RRM2) found in plant
                     pre-mRNA-splicing factor SF2 and similar proteins;
                     cd12602"
                     /db_xref="CDD:410014"
     CDS             1..298
                     /gene="LOC107893284"
                     /coded_by="XM_041085552.1:303..1199"
                     /db_xref="GeneID:107893284"
ORIGIN      
        1 mgrssrtlyv gnlpgdtrlr evedlfykyg pivdidlkip prppgyafve fedphdaeda
       61 irgrdgydfd gyylrvelah ggrrpsssvd rhssysgsss rgpsrrtdyr vlvtglpssa
      121 swqdlkdhmr kagdvcfsqv frdrggmtgi vdytnyddmk yairklddse frnafsrayi
      181 rvkeydskyd srrsysrsrs pysrspsrsc syssrsrsrs ksprarytsq spsvsrsvsp
      241 cshsvspars nsrsrsisrs ptpsprskhe srtppnrsps wsrscrlsrs rspsvksd
//
LOCUS       XP_016673717              95 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673717
VERSION     XP_016673717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..95
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10535
     Region          17..>57
                     /region_name="HIG_1_N"
                     /note="Hypoxia induced protein conserved region;
                     pfam04588"
                     /db_xref="CDD:461361"
     CDS             1..95
                     /gene="LOC107893285"
                     /coded_by="XM_016818228.2:105..392"
                     /db_xref="GeneID:107893285"
ORIGIN      
        1 maeskskfes irewvvdhkl rtvgclwlsg iggsiaynws qphmkpsvki iharlhaqal
       61 tlaalagaav veyydhrskp kgdpyakylp hshke
//
LOCUS       XP_016673719             126 aa            linear   PLN 06-AUG-2024
DEFINITION  dormancy-associated protein homolog 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673719
VERSION     XP_016673719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..126
                     /product="dormancy-associated protein homolog 3 isoform
                     X1"
                     /calculated_mol_wt=13671
     Region          7..>94
                     /region_name="Auxin_repressed"
                     /note="Dormancy/auxin associated protein; pfam05564"
                     /db_xref="CDD:398933"
     CDS             1..126
                     /gene="LOC107893286"
                     /coded_by="XM_016818230.2:240..620"
                     /db_xref="GeneID:107893286"
ORIGIN      
        1 mglldqlwdd tvagprpdng lgklrkhstf tfrsnssket dggsvrsynd etpeettkvt
       61 rtimivkspr yqsgsppvsp aestppvspf sggsresyrf rrrstsdaye kgkegggrsl
      121 appydv
//
LOCUS       XP_016673720             123 aa            linear   PLN 06-AUG-2024
DEFINITION  dormancy-associated protein homolog 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673720
VERSION     XP_016673720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818231.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..123
                     /product="dormancy-associated protein homolog 3 isoform
                     X2"
                     /calculated_mol_wt=13459
     Region          7..>29
                     /region_name="Auxin_repressed"
                     /note="Dormancy/auxin associated protein; pfam05564"
                     /db_xref="CDD:398933"
     CDS             1..123
                     /gene="LOC107893286"
                     /coded_by="XM_016818231.2:240..611"
                     /db_xref="GeneID:107893286"
ORIGIN      
        1 mglldqlwdd tvagprpdng lgklrkhstf tfrsnssket dggsvrsynd etpeettkvt
       61 rtimivkspr yqsgsppvsp aestppeeae srigfgegqh qmhtrrgrrv evgalllltt
      121 cem
//
LOCUS       XP_016675497             245 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET17 [Gossypium hirsutum].
ACCESSION   XP_016675497
VERSION     XP_016675497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820008.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="bidirectional sugar transporter SWEET17"
                     /calculated_mol_wt=27038
     Region          8..93
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     Region          130..213
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..245
                     /gene="LOC107894794"
                     /coded_by="XM_016820008.2:235..972"
                     /db_xref="GeneID:107894794"
ORIGIN      
        1 mlslitifgl lgnittglvy lapvktfwhi vqrgsteefe slpyvvklln gymwvyygvv
       61 kpnsilvatv ngfgavlelv yviiflifap praraitavl fgvldvvfpi aavlitqmsc
      121 nremqitiag flsllfsvlt ygsplsimkt vvrtksvdym pfllsfilfi ngltwtvyav
      181 ltrdwfigip ngsgfvlgta qlvlyamywk pekskrtssd dgcqtenlia hsaplldkne
      241 sraea
//
LOCUS       XP_016673721             187 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L18-2 [Gossypium hirsutum].
ACCESSION   XP_016673721
VERSION     XP_016673721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..187
                     /product="60S ribosomal protein L18-2"
                     /calculated_mol_wt=20827
     Region          2..187
                     /region_name="Ribosomal_L18"
                     /note="Ribosomal protein 60S L18 and 50S L18e; pfam17135"
                     /db_xref="CDD:465358"
     CDS             1..187
                     /gene="LOC107893287"
                     /coded_by="XM_016818232.2:157..720"
                     /db_xref="GeneID:107893287"
ORIGIN      
        1 mgidlvaggk skktkrtapk sddiylkllv klyrflvrrt gskfnavilk rlfmskvnkp
       61 plslsrlief megkeekiav vvgtvtddir vydvpalkvt alrftetara riekaggecl
      121 tfdqlalrap lgqntvllrg pknareavkh fgpapgvphs htkpyvrsrg rkferargrr
      181 nskgfrv
//
LOCUS       XP_040941487             797 aa            linear   PLN 06-AUG-2024
DEFINITION  remodeling and spacing factor 1 [Gossypium hirsutum].
ACCESSION   XP_040941487
VERSION     XP_040941487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085553.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..797
                     /product="remodeling and spacing factor 1"
                     /calculated_mol_wt=89769
     Region          320..367
                     /region_name="RING-HC_Topors"
                     /note="RING finger, HC subclass, found in topoisomerase
                     I-binding arginine/serine-rich protein (Topors) and
                     similar proteins; cd16574"
                     /db_xref="CDD:438236"
     Region          415..458
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(427..430,434,453)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..797
                     /gene="LOC107893288"
                     /coded_by="XM_041085553.1:243..2636"
                     /db_xref="GeneID:107893288"
ORIGIN      
        1 mvrggkvgqr snfkrrvrsk deasddsded yvvslegnde seddvedycs sldecaseeg
       61 fgsfvdgedd deeekevrkv vwlkakpmss artrkivdrk sqkrkvvsde edddedyeme
      121 eeeeqeeedd ddleftldee dcldeeeelt mtkkkknnkk vskqglrerv psnhrkkrrk
      181 savskkplrk ggkkkcrlkr krrieeeeed dddcdfidka ptvrkksrkn gglrkkayvi
      241 csdsdfvssg ssdyeytise eereqvkeas hlcgsiktsl rssssskriq eveelgqckk
      301 psgkkgkekv eetkaeviks vcgiclseed krrlrgklnc cshyfcftci mewskvesrc
      361 plckqrfeti skparstagv dlrdvviqvp krdqvyqpse eelrsyldpy envicsecnq
      421 ggddelmllc dlcdssahty cvglgrevpe gnwycygcrp valgssssqv qdplpdqrti
      481 nnlynrfspi vnvgesldsi vvpsprtplp pgfvglsspr fptadfpsvs pvsgvaaqtl
      541 tgrrwlhrqi qnlrsmnrms lmvgrtdgis tanmgidfvn shvdqsrqtt iqqartqqmg
      601 qtviteglhd dpssslqsrd ffsprlshlr rqavqdsttt tlntsvnlml wpelaginsd
      661 aqlyqcrngp nigpdvfgsa fsvrnednss makeqlqvmv rsqlkalsrd sdldngtftd
      721 iatssmhtll aacglehrrs evhmvpppsn cthiervaag qaslmkgccl tcfdsfvkdv
      781 vkrimdtrsr qwlslgl
//
LOCUS       XP_040941488             797 aa            linear   PLN 06-AUG-2024
DEFINITION  remodeling and spacing factor 1 [Gossypium hirsutum].
ACCESSION   XP_040941488
VERSION     XP_040941488.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085554.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..797
                     /product="remodeling and spacing factor 1"
                     /calculated_mol_wt=89769
     Region          320..367
                     /region_name="RING-HC_Topors"
                     /note="RING finger, HC subclass, found in topoisomerase
                     I-binding arginine/serine-rich protein (Topors) and
                     similar proteins; cd16574"
                     /db_xref="CDD:438236"
     Region          415..458
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(427..430,434,453)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..797
                     /gene="LOC107893288"
                     /coded_by="XM_041085554.1:256..2649"
                     /db_xref="GeneID:107893288"
ORIGIN      
        1 mvrggkvgqr snfkrrvrsk deasddsded yvvslegnde seddvedycs sldecaseeg
       61 fgsfvdgedd deeekevrkv vwlkakpmss artrkivdrk sqkrkvvsde edddedyeme
      121 eeeeqeeedd ddleftldee dcldeeeelt mtkkkknnkk vskqglrerv psnhrkkrrk
      181 savskkplrk ggkkkcrlkr krrieeeeed dddcdfidka ptvrkksrkn gglrkkayvi
      241 csdsdfvssg ssdyeytise eereqvkeas hlcgsiktsl rssssskriq eveelgqckk
      301 psgkkgkekv eetkaeviks vcgiclseed krrlrgklnc cshyfcftci mewskvesrc
      361 plckqrfeti skparstagv dlrdvviqvp krdqvyqpse eelrsyldpy envicsecnq
      421 ggddelmllc dlcdssahty cvglgrevpe gnwycygcrp valgssssqv qdplpdqrti
      481 nnlynrfspi vnvgesldsi vvpsprtplp pgfvglsspr fptadfpsvs pvsgvaaqtl
      541 tgrrwlhrqi qnlrsmnrms lmvgrtdgis tanmgidfvn shvdqsrqtt iqqartqqmg
      601 qtviteglhd dpssslqsrd ffsprlshlr rqavqdsttt tlntsvnlml wpelaginsd
      661 aqlyqcrngp nigpdvfgsa fsvrnednss makeqlqvmv rsqlkalsrd sdldngtftd
      721 iatssmhtll aacglehrrs evhmvpppsn cthiervaag qaslmkgccl tcfdsfvkdv
      781 vkrimdtrsr qwlslgl
//
LOCUS       XP_040941489             219 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DEHYDRATION-INDUCED 19 homolog 3 [Gossypium hirsutum].
ACCESSION   XP_040941489
VERSION     XP_040941489.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085555.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="protein DEHYDRATION-INDUCED 19 homolog 3"
                     /calculated_mol_wt=24441
     Region          42..95
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     Region          115..214
                     /region_name="Di19_C"
                     /note="Stress-induced protein Di19, C-terminal; pfam14571"
                     /db_xref="CDD:434045"
     CDS             1..219
                     /gene="LOC107893289"
                     /coded_by="XM_041085555.1:304..963"
                     /db_xref="GeneID:107893289"
ORIGIN      
        1 mdadswsarl ssaskryqsa lqlrsdmfmg feeidgedei reefrcpfcs eyfdivglcc
       61 hiddehpvea kngvcsvcav rvgvdmvahi tlqhgnifkm qrkrksrkgg shstlsllrk
      121 elregnlqsf fggssctvss nsapdpllss filpmvddfv svqpnfsret rttkkssdvn
      181 ksernvkssp lslkdqeeka krcefvqgll lstmpdeil
//
LOCUS       XP_016673723             529 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha [Gossypium hirsutum].
ACCESSION   XP_016673723
VERSION     XP_016673723.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818234.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673723.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..529
                     /product="importin subunit alpha"
                     /calculated_mol_wt=58124
     Region          10..526
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          74..99
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          110..143
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(134,138,142,176,180,184,219,223,227)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          151..187
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          193..227
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          244..269
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(260,264,268,302,306,310,345,349,353)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          277..313
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          319..354
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          362..398
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          405..439
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..529
                     /gene="LOC107893290"
                     /coded_by="XM_016818234.2:134..1723"
                     /db_xref="GeneID:107893290"
ORIGIN      
        1 mslrpnsrte vrrnrykvav daeegrrrre dnmveirknr reeslqkkrr eglqaqpmpa
       61 slhssavekk lenlpamvag vwaddsnmql eattqfrkll siersppidq viqagvvprf
      121 ieflarddfp qlqfeaawal tniasgtsen tkvvidhgav pifvkllasp sddvreqavw
      181 algnvagdsp rcrdlvlshg allpllaqln ehaklsmlrn atwtlsnfcr gkpqppfdlv
      241 kpalpalthl ihsndeevlt dacwalsyls dgtndkiqav ieagvcgrlv ellmhpcpsv
      301 lipalrtvgn ivtgddgqtq ciinhqalpc llnlltnnfk ksikkeacwt isnitagnke
      361 qiqavieani isplvhllqn aefdikkeaa waisnatsgg thdqikflvs qgcikplcdl
      421 lncpdprivt vcleglenil kvgeadknlg ttggvnlyaq middaeglek ienlqshdnt
      481 eiyekavkvl etywleeede tmppgdasqt gfhfgggelp vpsggfsfs
//
LOCUS       XP_016673724             175 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 15 [Gossypium hirsutum].
ACCESSION   XP_016673724
VERSION     XP_016673724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818235.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..175
                     /product="GATA transcription factor 15"
                     /calculated_mol_wt=19168
     Region          23..>59
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     CDS             1..175
                     /gene="LOC107893291"
                     /coded_by="XM_016818235.2:549..1076"
                     /db_xref="GeneID:107893291"
ORIGIN      
        1 mgvmdlreqk slnedtmset mkkfctdckt tktplwrggp sgpkslcnac gikyrkrrra
       61 mlglneasek kkvkwhlsss sslsssstit tssasiattn desvddmkps grfsglgetv
      121 kirllalsge vllqsslslt wvvkkqrcqr rrkvgedeel aafslmamsy glvfa
//
LOCUS       XP_040941490             229 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24delta9 [Gossypium
            hirsutum].
ACCESSION   XP_040941490
VERSION     XP_040941490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085556.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..229
                     /product="transmembrane emp24 domain-containing protein
                     p24delta9"
                     /calculated_mol_wt=25012
     Region          24..193
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..229
                     /gene="LOC107894445"
                     /coded_by="XM_041085556.1:16..705"
                     /db_xref="GeneID:107894445"
ORIGIN      
        1 mcglnlgfiv imiglvvete igesmrfele sgktkciaed ikanamtvgk ysivnpsegq
       61 pfpdshklvv rvsssngnny hlgdqvdsgt faftaaesgd yttcfwankh nppvkmtidf
      121 dwksgvaakd wskvakkgqv dtmeielkkl ydtvaaihee mfylrereee mqelnketns
      181 kmatltaclv gcigyketns kmatltaclv gcigiantpl idgphiipi
//
LOCUS       XP_040941492             421 aa            linear   PLN 06-AUG-2024
DEFINITION  calreticulin isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941492
VERSION     XP_040941492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085558.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="calreticulin isoform X1"
                     /calculated_mol_wt=48297
     Region          32..342
                     /region_name="Calreticulin"
                     /note="Calreticulin family; pfam00262"
                     /db_xref="CDD:459737"
     CDS             1..421
                     /gene="LOC107893231"
                     /coded_by="XM_041085558.1:78..1343"
                     /db_xref="GeneID:107893231"
ORIGIN      
        1 msttmanhkp fpnflslill slvaiasaev ffeerfedgw esrwvksdwk kdenmagewn
       61 ytsgkwngdp ndkgiqtsed yrfyaisaef pevnnkgktl vfqfsvkheq kldcgggymk
      121 llsdnidqkk fggdtpysim fgpdicgyst kkvhailtyn gtnhlikkev pcetdqlthv
      181 ytfilrpdat ysilidnvek qtgslytdwd llppkkikdp eakkpedwdd keyipdpedk
      241 kpegyddipk eipdpdakkp edwddeedge wtpstipnpe ykgpwkpkki knpnykgkwk
      301 apmidnpdfk ddpdlyvfpn lkyvgielwq vksgtmfdni lvaddveyak klaeetwgkq
      361 kdaekaafee aekkreeees kddpvdsdae deddaddteg hesdsdtksd dedkedahde
      421 l
//
LOCUS       XP_016673657             420 aa            linear   PLN 06-AUG-2024
DEFINITION  calreticulin isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673657
VERSION     XP_016673657.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818168.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..420
                     /product="calreticulin isoform X2"
                     /calculated_mol_wt=48154
     Region          32..342
                     /region_name="Calreticulin"
                     /note="Calreticulin family; pfam00262"
                     /db_xref="CDD:459737"
     CDS             1..420
                     /gene="LOC107893231"
                     /coded_by="XM_016818168.2:78..1340"
                     /db_xref="GeneID:107893231"
ORIGIN      
        1 msttmanhkp fpnflslill slvaiasaev ffeerfedgw esrwvksdwk kdenmagewn
       61 ytsgkwngdp ndkgiqtsed yrfyaisaef pevnnkgktl vfqfsvkheq kldcgggymk
      121 llsdnidqkk fggdtpysim fgpdicgyst kkvhailtyn gtnhlikkev pcetdqlthv
      181 ytfilrpdat ysilidnvek qtgslytdwd llppkkikdp eakkpedwdd keyipdpedk
      241 kpegyddipk eipdpdakkp edwddeedge wtpstipnpe ykgpwkpkki knpnykgkwk
      301 apmidnpdfk ddpdlyvfpn lkyvgielwq vksgtmfdni lvaddveyak klaeetwgkq
      361 kdaekaafee aekkreeesk ddpvdsdaed eddaddtegh esdsdtksdd ddkedahdel
//
LOCUS       XP_016673658             417 aa            linear   PLN 06-AUG-2024
DEFINITION  calreticulin isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016673658
VERSION     XP_016673658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818169.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..417
                     /product="calreticulin isoform X3"
                     /calculated_mol_wt=47820
     Region          28..338
                     /region_name="Calreticulin"
                     /note="Calreticulin family; pfam00262"
                     /db_xref="CDD:459737"
     CDS             1..417
                     /gene="LOC107893231"
                     /coded_by="XM_016818169.2:253..1506"
                     /db_xref="GeneID:107893231"
ORIGIN      
        1 masrkrfpnf vslillslva iasaevffee rfedgweshw vksdwkkden magewnytsg
       61 kwngdpndkg iqtsedyrfy aisaefpevn nkgktlvfqf svkheqkldc gggymkllsg
      121 dvdqkkfggd tpysimfgpd icgystkkvh ailtyngtnh likkevpcet dqlthvytfi
      181 lrpdatysil idnvekqtgs lytdwdilpp qkikdpeakk pedwddkeyi papedkkpeg
      241 yddipkeipd pdakkpedwd deedgewtps tipnpeykgp wkpkkiknpn ykgkwkapmi
      301 dnpdfkddpd lyvfpnlkyv gielwqvksg tlfdnilvad dveyakklae etwgkqkdae
      361 kaafeeeekk reeeeskddp vdsdaededd addteghesd sdtksddedk edahdel
//
LOCUS       XP_016673660             342 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673660
VERSION     XP_016673660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818171.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37317
     Region          108..310
                     /region_name="DUF1645"
                     /note="Protein of unknown function (DUF1645); pfam07816"
                     /db_xref="CDD:429678"
     CDS             1..342
                     /gene="LOC107893234"
                     /coded_by="XM_016818171.2:114..1142"
                     /db_xref="GeneID:107893234"
ORIGIN      
        1 mefqtqngqt lvphpepqvf pecyestsst pyasapsspg rapgpgpgfi nsgffysapa
       61 spmhfamass vvassrvsss tqpsspdfef sarfgptgsg qtgsmssade lflngkirpm
      121 klathlerpq vlaplldleh edddddeted adnkirgrdl rlrdkslrrr trsmspfrha
      181 afgddqtmcl dkdsgnkadt nngtscssag risrrwvflk dflrsksegt nnnnnnsklw
      241 stisfspake kkpgsnktng vvhesknkrp sktkavngig kkrvppsphd lhytayktqa
      301 eemrkktflp yrqgllvclg fsskgysamn glakalnpvs sr
//
LOCUS       XP_040941494             276 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941494
VERSION     XP_040941494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085560.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30091
     CDS             1..276
                     /gene="LOC107893304"
                     /coded_by="XM_041085560.1:301..1131"
                     /db_xref="GeneID:107893304"
ORIGIN      
        1 mdfqrkrvql lgfivgvivl sytaekcrhl vgeeassqsg qftllncfdm gsgsvacavk
       61 egvklyfyni rsahvekarn laiekaieda vsqgmaakea akraqiegkk aaklatrqak
      121 riigpiissg wdffealyyg gtlaegflrg tgtlfgaygg gfigeqslgr vgylvgshlg
      181 swvggriglm vydvvngvhy llqfvqaees pvyeksevsg dsyvygnsda yesphdesse
      241 sqesenhkds yikessdeye sppdensesq esfsfw
//
LOCUS       XP_016673742             276 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673742
VERSION     XP_016673742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818253.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30091
     CDS             1..276
                     /gene="LOC107893304"
                     /coded_by="XM_016818253.2:298..1128"
                     /db_xref="GeneID:107893304"
ORIGIN      
        1 mdfqrkrvql lgfivgvivl sytaekcrhl vgeeassqsg qftllncfdm gsgsvacavk
       61 egvklyfyni rsahvekarn laiekaieda vsqgmaakea akraqiegkk aaklatrqak
      121 riigpiissg wdffealyyg gtlaegflrg tgtlfgaygg gfigeqslgr vgylvgshlg
      181 swvggriglm vydvvngvhy llqfvqaees pvyeksevsg dsyvygnsda yesphdesse
      241 sqesenhkds yikessdeye sppdensesq esfsfw
//
LOCUS       XP_016675498             315 aa            linear   PLN 06-AUG-2024
DEFINITION  nicotianamine synthase [Gossypium hirsutum].
ACCESSION   XP_016675498
VERSION     XP_016675498.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820009.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="nicotianamine synthase"
                     /calculated_mol_wt=35256
     Region          1..289
                     /region_name="PLN03075"
                     /note="nicotianamine synthase; Provisional"
                     /db_xref="CDD:178624"
     CDS             1..315
                     /gene="LOC107894796"
                     /coded_by="XM_016820009.2:42..989"
                     /db_xref="GeneID:107894796"
ORIGIN      
        1 mvwekdplvq kvcelydqis sleslkpskd vnmlftqlvl tcmppspidv tklckriqei
       61 rfklirlcge aeglleshfs tilgsyenpl hhlnifpyys nylklsllef dilkkhcsdy
      121 vpnkvafvgs gplpltsivl asfhltttsf hnydidpsan skalqlvssd pdlsermifh
      181 ttdimdvtya lkdydvvfla alvgmdkdak vrvidhlaky mapgavlmlr sahgarafly
      241 pvvdpcdltg fevlsvfhpt devinsvvia rkvpttkptv enpklpnkcs didmfsplln
      301 hvnlieeldi edqls
//
LOCUS       XP_016673741             197 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH149 [Gossypium hirsutum].
ACCESSION   XP_016673741
VERSION     XP_016673741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818252.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="transcription factor bHLH149"
                     /calculated_mol_wt=22070
     Region          126..178
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(134..135,138,141..142,145,154..155,158..159,162,165,
                     168..169,172,175..176,178)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..197
                     /gene="LOC107893302"
                     /coded_by="XM_016818252.2:114..707"
                     /db_xref="GeneID:107893302"
ORIGIN      
        1 masflpdlep gpemspefer kkrrktegnp psfhptqgnr rikqwrtqre qriyssnlie
       61 slrrsptatg nyvrdmayrl lavsakgttr wsraillgrl aagakmrkhk rakvganrkl
      121 rkpvsnrqkr klpaverklm algrllpgcr klplanllee tsdyiaalem qvramtaise
      181 flasggaqpp agrlvns
//
LOCUS       XP_040941495             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941495
VERSION     XP_040941495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085561.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18402
     Region          29..138
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..166
                     /gene="LOC107893301"
                     /coded_by="XM_041085561.1:1055..1555"
                     /db_xref="GeneID:107893301"
ORIGIN      
        1 mslvteeika saseiyhgde icqekskfll eevgmprgll plrdieecgy vkdtgfvwlk
       61 qkksithrfe kigklvsyat evtavvekgk ikkltgvktk ellvwitlsd iqvddpptgk
      121 itfktpsglf rtfpvsafei egeqvkgskg kdeekqvnga vevkev
//
LOCUS       XP_016673738             352 aa            linear   PLN 06-AUG-2024
DEFINITION  protein AGENET DOMAIN (AGD)-CONTAINING P1 [Gossypium hirsutum].
ACCESSION   XP_016673738
VERSION     XP_016673738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..352
                     /product="protein AGENET DOMAIN (AGD)-CONTAINING P1"
                     /calculated_mol_wt=40326
     Region          21..85
                     /region_name="Agenet"
                     /note="Agenet domain; pfam05641"
                     /db_xref="CDD:461700"
     Region          96..140
                     /region_name="Tudor_Agenet_AtDUF_rpt2_4"
                     /note="second and fourth Tudor-like Agenet domains found
                     in the family of Arabidopsis thaliana DUF724
                     domain-containing proteins (AtDUFs); cd20406"
                     /db_xref="CDD:410477"
     Site            order(103..104,107)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410477"
     Region          218..278
                     /region_name="Agenet"
                     /note="Agenet domain; pfam05641"
                     /db_xref="CDD:461700"
     Region          289..334
                     /region_name="Tudor_Agenet_AtDUF_rpt2_4"
                     /note="second and fourth Tudor-like Agenet domains found
                     in the family of Arabidopsis thaliana DUF724
                     domain-containing proteins (AtDUFs); cd20406"
                     /db_xref="CDD:410477"
     Site            order(297..298,301)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410477"
     CDS             1..352
                     /gene="LOC107893300"
                     /coded_by="XM_016818249.2:269..1327"
                     /db_xref="GeneID:107893300"
ORIGIN      
        1 mtkrkpttap atndpphlqp gsqveissnd pgfrgswytg viikrpsskk pskflvqyth
       61 lfedeagttp lretidavdi rplaprestr kfkfseevda yyndgwwegv itkelengnf
      121 hvyfkrskeq lefgeeqlrl hrewingswt pplagdeqvk esdravteak mkfskvvtqe
      181 klkrdnaask kksksglags geklrsskit mdkffckgah vevtsdedgf egawfagtiv
      241 kvvgkdrylv qyeslrtddd tdflkeefdd lhirpcppei vmadrfqkld evdafyndgw
      301 wvgviskvls dskyevyfka tkeemkfehs elrlhqdwin gkwvaafqal ks
//
LOCUS       XP_016673736             415 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-3 complex subunit mu [Gossypium hirsutum].
ACCESSION   XP_016673736
VERSION     XP_016673736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..415
                     /product="AP-3 complex subunit mu"
                     /calculated_mol_wt=46205
     Region          3..142
                     /region_name="AP3_Mu_N"
                     /note="AP-3 complex subunit mu N-terminal domain; cd14837"
                     /db_xref="CDD:341441"
     Site            order(18,21,47..48,56,58,60,72..74,76..78,81,85,111..112,
                     115..116,118..120,122..125,134,136..137)
                     /site_type="other"
                     /note="putative AP-3 beta interface [polypeptide binding]"
                     /db_xref="CDD:341441"
     Region          167..414
                     /region_name="AP-3_Mu3_Cterm"
                     /note="C-terminal domain of medium Mu3 subunit in adaptor
                     protein (AP) complex AP-3; cd09252"
                     /db_xref="CDD:271160"
     Site            order(182..184,211,304,375,377,386,400..403,405)
                     /site_type="other"
                     /note="putative signal peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271160"
     CDS             1..415
                     /gene="LOC107893296"
                     /coded_by="XM_016818247.2:240..1487"
                     /db_xref="GeneID:107893296"
ORIGIN      
        1 mlqcifllsd sgevmlekql tghrvdrsic dwfwdhvisq gdsfksqpvi aspthylfqv
       61 vregitflac tqvempplmg ieflcrvsdv lsdylgglne dvikdnfviv yelldemidn
      121 gfpltteani lremiappni vskvlsvvtg nssnvsdtlp gatrscipwr aaepkyanne
      181 vyvdlveemd avinrdgalv kcevygevrv nshlsglpdl tlsfanpsil ddvrfhpcvr
      241 frpweshqvl sfvppdgefk lmsyrikklk stplyvkpql tsdagkcrvn vlvgirndpg
      301 ktidsitlef qlppcilsad lnsnhgtvni lgnkicswti gripkdktps lsgtlllete
      361 lerlhvfptf rvgfrimgva lsglqidkld lktapsrlyk gfraltrage fevrs
//
LOCUS       XP_016673733             343 aa            linear   PLN 06-AUG-2024
DEFINITION  galactinol synthase 2 [Gossypium hirsutum].
ACCESSION   XP_016673733
VERSION     XP_016673733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..343
                     /product="galactinol synthase 2"
                     /calculated_mol_wt=39078
     Region          1..343
                     /region_name="PLN00176"
                     /note="galactinol synthase"
                     /db_xref="CDD:215090"
     Site            order(106..107,110,124,126..128,151,191..193,221..222,
                     244..245,263,265,267,270)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(126,128,263)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(150..151,222,235,237..238,242,246)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..343
                     /gene="LOC107893295"
                     /coded_by="XM_016818244.2:198..1229"
                     /db_xref="GeneID:107893295"
ORIGIN      
        1 mapnitsnra atvtarvpal tkapippera yvtflagngd yvkgvvglak glrkvkskyp
       61 lvvavlpdvp edhrkilvaq gcivkqiepv lppenqtqfa mayyvinysk lriwkfveys
      121 kmiyldgdiq vfdnidhlfd vedgyfyavm dcfcektwsh tpqykigycq qcpdkvewpa
      181 hlgpkpplyf nagmfvyepn lstyyqllat fkvtpptpfa eqdylnmffr diyrpippiy
      241 nlvmamlwrh penvdaekak vvhycaagsk pwrftgkeen mdredikklv tkwwdiynda
      301 sldysigeae eaeeedeqrg ieqflaalle agvvhyisap saa
//
LOCUS       XP_016673737             257 aa            linear   PLN 06-AUG-2024
DEFINITION  psbP domain-containing protein 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016673737
VERSION     XP_016673737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="psbP domain-containing protein 1, chloroplastic"
                     /calculated_mol_wt=29104
     Region          <40..254
                     /region_name="PsbP"
                     /note="cl03356"
                     /db_xref="CDD:446075"
     CDS             1..257
                     /gene="LOC107893297"
                     /coded_by="XM_016818248.2:230..1003"
                     /db_xref="GeneID:107893297"
ORIGIN      
        1 maiildsllp lsrptlparl stpfppsasc lctrrnqsfq assiprrnam alilstyifs
       61 evglhdniaf aepsvgfrey idtfdgyslk ypqnwiqvrg agadiffrdp yvldenlsve
      121 lsspsssryk tvedlgppee agkkvlkqyl tefmstrlgv rresnilsts srvaddgkly
      181 yqvevniksy antnelavmp qdrvprlewn rrylsvlgve nnrlyelrlq tpesvfveee
      241 ndlrqvmdsf rvnkvag
//
LOCUS       XP_040941497             182 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941497
VERSION     XP_040941497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085563.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..182
                     /product="ADP-ribosylation factor 2-B isoform X1"
                     /calculated_mol_wt=20604
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..182
                     /gene="LOC107893294"
                     /coded_by="XM_041085563.1:180..728"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 vg
//
LOCUS       XP_016673728             182 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673728
VERSION     XP_016673728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818239.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..182
                     /product="ADP-ribosylation factor 2-B isoform X1"
                     /calculated_mol_wt=20604
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..182
                     /gene="LOC107893294"
                     /coded_by="XM_016818239.2:178..726"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 vg
//
LOCUS       XP_016673729             182 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673729
VERSION     XP_016673729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818240.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..182
                     /product="ADP-ribosylation factor 2-B isoform X1"
                     /calculated_mol_wt=20604
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..182
                     /gene="LOC107893294"
                     /coded_by="XM_016818240.2:164..712"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 vg
//
LOCUS       XP_040941499             182 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941499
VERSION     XP_040941499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085565.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..182
                     /product="ADP-ribosylation factor 2-B isoform X1"
                     /calculated_mol_wt=20604
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..182
                     /gene="LOC107893294"
                     /coded_by="XM_041085565.1:143..691"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 vg
//
LOCUS       XP_016673731             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673731
VERSION     XP_016673731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818242.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B isoform X2"
                     /calculated_mol_wt=20505
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107893294"
                     /coded_by="XM_016818242.2:181..726"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 g
//
LOCUS       XP_016673730             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673730
VERSION     XP_016673730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818241.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B isoform X2"
                     /calculated_mol_wt=20505
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107893294"
                     /coded_by="XM_016818241.2:213..758"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 g
//
LOCUS       XP_016673732             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673732
VERSION     XP_016673732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B isoform X2"
                     /calculated_mol_wt=20505
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107893294"
                     /coded_by="XM_016818243.2:164..709"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 g
//
LOCUS       XP_040941500             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941500
VERSION     XP_040941500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085566.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B isoform X2"
                     /calculated_mol_wt=20505
     Region          1..180
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107893294"
                     /coded_by="XM_041085566.1:142..687"
                     /db_xref="GeneID:107893294"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 g
//
LOCUS       XP_016674009             329 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase At1g48100-like [Gossypium hirsutum].
ACCESSION   XP_016674009
VERSION     XP_016674009.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818520.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674009.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..329
                     /product="polygalacturonase At1g48100-like"
                     /calculated_mol_wt=35585
     Region          <3..310
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..329
                     /gene="LOC107893504"
                     /coded_by="XM_016818520.2:1..990"
                     /db_xref="GeneID:107893504"
ORIGIN      
        1 mppdgpdswp rniskrqwlv fyringmsmq ggglvdgkge nwwnlpckph kgvngttmsg
       61 pcdspvairf fmssnltvkg lkikngpqfh frfdachgvr vesltikapa qspntdgihi
      121 entnnvqiyn siisngddci sigagcydvd innitcgpsh gisigslgin ksracvsnis
      181 vsdsviqhsn ngiriktwqg gsgcvskvef snihmeavqn piiidqyycl tkncsnqtsa
      241 vvindisysn ikgsfdvrsp pmsfacsdsi pctnlkltqv ellpaakgrt vanpfcwnay
      301 gtvlkqtipp iyclmeetna tidntllcg
//
LOCUS       XP_016674010             220 aa            linear   PLN 06-AUG-2024
DEFINITION  pyrrolidone-carboxylate peptidase 1 [Gossypium hirsutum].
ACCESSION   XP_016674010
VERSION     XP_016674010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818521.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..220
                     /product="pyrrolidone-carboxylate peptidase 1"
                     /calculated_mol_wt=23757
     Region          9..217
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cd00501"
                     /db_xref="CDD:238279"
     Site            order(16,19,57,168..170)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238279"
     Site            order(98..100,153,156..160,197,203..204,206)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(104,170,192)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(105..106,110,112,114,124..125,137..140,146,163..164,
                     167)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            206
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..220
                     /gene="LOC107893505"
                     /coded_by="XM_016818521.2:442..1104"
                     /db_xref="GeneID:107893505"
ORIGIN      
        1 mgsegpaavt ihvtgfkkfh gvsenpteti vsnlkeytek kglpkgvilg scsvletagq
       61 galpqlyqtl qsaltgkdse sscsgriiwv hfgvnsgasr faverqaane atfrcpdemg
      121 wkpqkvpiip adggisrvre tslpveeitk alakkgfevm tsddagrfvc nyvyyhslrf
      181 aeqngikslf vhvplfltid eetqmkfaas llvvlaslcq
//
LOCUS       XP_040941501             220 aa            linear   PLN 06-AUG-2024
DEFINITION  pyrrolidone-carboxylate peptidase 1 [Gossypium hirsutum].
ACCESSION   XP_040941501
VERSION     XP_040941501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085567.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..220
                     /product="pyrrolidone-carboxylate peptidase 1"
                     /calculated_mol_wt=23757
     Region          9..217
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cd00501"
                     /db_xref="CDD:238279"
     Site            order(16,19,57,168..170)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238279"
     Site            order(98..100,153,156..160,197,203..204,206)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(104,170,192)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(105..106,110,112,114,124..125,137..140,146,163..164,
                     167)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            206
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..220
                     /gene="LOC107893505"
                     /coded_by="XM_041085567.1:393..1055"
                     /db_xref="GeneID:107893505"
ORIGIN      
        1 mgsegpaavt ihvtgfkkfh gvsenpteti vsnlkeytek kglpkgvilg scsvletagq
       61 galpqlyqtl qsaltgkdse sscsgriiwv hfgvnsgasr faverqaane atfrcpdemg
      121 wkpqkvpiip adggisrvre tslpveeitk alakkgfevm tsddagrfvc nyvyyhslrf
      181 aeqngikslf vhvplfltid eetqmkfaas llvvlaslcq
//
LOCUS       XP_040941502             138 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase At1g48100-like [Gossypium hirsutum].
ACCESSION   XP_040941502
VERSION     XP_040941502.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085568.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..138
                     /product="polygalacturonase At1g48100-like"
                     /calculated_mol_wt=15252
     Region          12..>122
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..138
                     /gene="LOC121212554"
                     /coded_by="XM_041085568.1:1..417"
                     /db_xref="GeneID:121212554"
ORIGIN      
        1 makltmpfhq vlqllffifs clffvtiqsr hhyghseqeq fhivshvslp pslapeaava
       61 rpsysvfnvl dfgavgdrvt ddtqafklaw dmacqiksav llvpdgysfm lqstifagpc
      121 ktvglvfrvi nvvifgld
//
LOCUS       XP_016674004            1070 aa            linear   PLN 06-AUG-2024
DEFINITION  FACT complex subunit SPT16 [Gossypium hirsutum].
ACCESSION   XP_016674004
VERSION     XP_016674004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818515.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1070
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=120578
     Region          23..1029
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1070
                     /gene="LOC107893502"
                     /coded_by="XM_016818515.2:653..3865"
                     /db_xref="GeneID:107893502"
ORIGIN      
        1 madnrnrnvk pangkpaaaa npyainldnf skrlkmlysh wnkhntdlwg sssalaiatp
       61 pvsedlrylk ssalniwlvg yefpetimvf lkkqihflcs qkkaslldvv kksareaidv
      121 evvihvkakg ddgtglmdti fraihsqass gdhnvpivgh isreapegkf letwdeklks
      181 akfelsdvtt gfsdlfavkd eteltnvkka afltssvmrq fvvpklekai deerkvshst
      241 lmddtektil epgrikvklk aenidicypp ifqsggefdl kpsassnden lyydstsvii
      301 calgsrynsy csniartfli danskqskay evllkaheaa igalksgnkv nsvyqaavsv
      361 vekeapelaa nltktagtgi glefretgls lnakndrilk pgmvfnvslg fqnlqtetnn
      421 pktrkysvll adtvivgekv pdvltskssk avkdvaysfn eddeeeekmk vkaedngnet
      481 lfskttlrsd nhemskeelr rqhqaelarq kneetarrla ggganaadnr gavktvgdli
      541 ayknvndlpp prdlmiqvdq kneaillpiy gsmvpfhvat vksvssqqds nrtsyiriif
      601 nvpgtsftph danslkfqgs iylkevsfrs kdsrhiievv qqiktlrrqv nsreseraer
      661 atlvtqerlq lasakfkpik lhdlwirppf ggrgrkltgs leahtngfry stsrpdervd
      721 vmfgnikhaf fqpaeremit lvhfhlhnhi mvgnkktkdv qfyievmdiv qtlgggkrsa
      781 ydpdeieeeq rerdrknkin tdfqnfvnrv ndlwgqpqfk afdlefdqpm relgfhgvph
      841 kasafivpts nclvelietp fvvitlseie ivnlervglg qknfdmtivf kdfkrdvlri
      901 dsipstsldg ikewlnttdl kyyesrlnln wrpilktitd dpekfiedgg weflnmevsd
      961 sesenseesd qgyvpsdvqs esgsededdd seslvesedd deedsdedse edegktweel
     1021 ereasyadre kgddsdseee rkrrkmkafg kgrvpdkrps snlpkrsklr
//
LOCUS       XP_040941503            1070 aa            linear   PLN 06-AUG-2024
DEFINITION  FACT complex subunit SPT16 [Gossypium hirsutum].
ACCESSION   XP_040941503
VERSION     XP_040941503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085569.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1070
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=120578
     Region          23..1029
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1070
                     /gene="LOC107893502"
                     /coded_by="XM_041085569.1:613..3825"
                     /db_xref="GeneID:107893502"
ORIGIN      
        1 madnrnrnvk pangkpaaaa npyainldnf skrlkmlysh wnkhntdlwg sssalaiatp
       61 pvsedlrylk ssalniwlvg yefpetimvf lkkqihflcs qkkaslldvv kksareaidv
      121 evvihvkakg ddgtglmdti fraihsqass gdhnvpivgh isreapegkf letwdeklks
      181 akfelsdvtt gfsdlfavkd eteltnvkka afltssvmrq fvvpklekai deerkvshst
      241 lmddtektil epgrikvklk aenidicypp ifqsggefdl kpsassnden lyydstsvii
      301 calgsrynsy csniartfli danskqskay evllkaheaa igalksgnkv nsvyqaavsv
      361 vekeapelaa nltktagtgi glefretgls lnakndrilk pgmvfnvslg fqnlqtetnn
      421 pktrkysvll adtvivgekv pdvltskssk avkdvaysfn eddeeeekmk vkaedngnet
      481 lfskttlrsd nhemskeelr rqhqaelarq kneetarrla ggganaadnr gavktvgdli
      541 ayknvndlpp prdlmiqvdq kneaillpiy gsmvpfhvat vksvssqqds nrtsyiriif
      601 nvpgtsftph danslkfqgs iylkevsfrs kdsrhiievv qqiktlrrqv nsreseraer
      661 atlvtqerlq lasakfkpik lhdlwirppf ggrgrkltgs leahtngfry stsrpdervd
      721 vmfgnikhaf fqpaeremit lvhfhlhnhi mvgnkktkdv qfyievmdiv qtlgggkrsa
      781 ydpdeieeeq rerdrknkin tdfqnfvnrv ndlwgqpqfk afdlefdqpm relgfhgvph
      841 kasafivpts nclvelietp fvvitlseie ivnlervglg qknfdmtivf kdfkrdvlri
      901 dsipstsldg ikewlnttdl kyyesrlnln wrpilktitd dpekfiedgg weflnmevsd
      961 sesenseesd qgyvpsdvqs esgsededdd seslvesedd deedsdedse edegktweel
     1021 ereasyadre kgddsdseee rkrrkmkafg kgrvpdkrps snlpkrsklr
//
LOCUS       XP_016674005            1070 aa            linear   PLN 06-AUG-2024
DEFINITION  FACT complex subunit SPT16 [Gossypium hirsutum].
ACCESSION   XP_016674005
VERSION     XP_016674005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818516.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1070
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=120578
     Region          23..1029
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1070
                     /gene="LOC107893502"
                     /coded_by="XM_016818516.2:716..3928"
                     /db_xref="GeneID:107893502"
ORIGIN      
        1 madnrnrnvk pangkpaaaa npyainldnf skrlkmlysh wnkhntdlwg sssalaiatp
       61 pvsedlrylk ssalniwlvg yefpetimvf lkkqihflcs qkkaslldvv kksareaidv
      121 evvihvkakg ddgtglmdti fraihsqass gdhnvpivgh isreapegkf letwdeklks
      181 akfelsdvtt gfsdlfavkd eteltnvkka afltssvmrq fvvpklekai deerkvshst
      241 lmddtektil epgrikvklk aenidicypp ifqsggefdl kpsassnden lyydstsvii
      301 calgsrynsy csniartfli danskqskay evllkaheaa igalksgnkv nsvyqaavsv
      361 vekeapelaa nltktagtgi glefretgls lnakndrilk pgmvfnvslg fqnlqtetnn
      421 pktrkysvll adtvivgekv pdvltskssk avkdvaysfn eddeeeekmk vkaedngnet
      481 lfskttlrsd nhemskeelr rqhqaelarq kneetarrla ggganaadnr gavktvgdli
      541 ayknvndlpp prdlmiqvdq kneaillpiy gsmvpfhvat vksvssqqds nrtsyiriif
      601 nvpgtsftph danslkfqgs iylkevsfrs kdsrhiievv qqiktlrrqv nsreseraer
      661 atlvtqerlq lasakfkpik lhdlwirppf ggrgrkltgs leahtngfry stsrpdervd
      721 vmfgnikhaf fqpaeremit lvhfhlhnhi mvgnkktkdv qfyievmdiv qtlgggkrsa
      781 ydpdeieeeq rerdrknkin tdfqnfvnrv ndlwgqpqfk afdlefdqpm relgfhgvph
      841 kasafivpts nclvelietp fvvitlseie ivnlervglg qknfdmtivf kdfkrdvlri
      901 dsipstsldg ikewlnttdl kyyesrlnln wrpilktitd dpekfiedgg weflnmevsd
      961 sesenseesd qgyvpsdvqs esgsededdd seslvesedd deedsdedse edegktweel
     1021 ereasyadre kgddsdseee rkrrkmkafg kgrvpdkrps snlpkrsklr
//
LOCUS       XP_016674006            1070 aa            linear   PLN 06-AUG-2024
DEFINITION  FACT complex subunit SPT16 [Gossypium hirsutum].
ACCESSION   XP_016674006
VERSION     XP_016674006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818517.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1070
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=120578
     Region          23..1029
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1070
                     /gene="LOC107893502"
                     /coded_by="XM_016818517.2:648..3860"
                     /db_xref="GeneID:107893502"
ORIGIN      
        1 madnrnrnvk pangkpaaaa npyainldnf skrlkmlysh wnkhntdlwg sssalaiatp
       61 pvsedlrylk ssalniwlvg yefpetimvf lkkqihflcs qkkaslldvv kksareaidv
      121 evvihvkakg ddgtglmdti fraihsqass gdhnvpivgh isreapegkf letwdeklks
      181 akfelsdvtt gfsdlfavkd eteltnvkka afltssvmrq fvvpklekai deerkvshst
      241 lmddtektil epgrikvklk aenidicypp ifqsggefdl kpsassnden lyydstsvii
      301 calgsrynsy csniartfli danskqskay evllkaheaa igalksgnkv nsvyqaavsv
      361 vekeapelaa nltktagtgi glefretgls lnakndrilk pgmvfnvslg fqnlqtetnn
      421 pktrkysvll adtvivgekv pdvltskssk avkdvaysfn eddeeeekmk vkaedngnet
      481 lfskttlrsd nhemskeelr rqhqaelarq kneetarrla ggganaadnr gavktvgdli
      541 ayknvndlpp prdlmiqvdq kneaillpiy gsmvpfhvat vksvssqqds nrtsyiriif
      601 nvpgtsftph danslkfqgs iylkevsfrs kdsrhiievv qqiktlrrqv nsreseraer
      661 atlvtqerlq lasakfkpik lhdlwirppf ggrgrkltgs leahtngfry stsrpdervd
      721 vmfgnikhaf fqpaeremit lvhfhlhnhi mvgnkktkdv qfyievmdiv qtlgggkrsa
      781 ydpdeieeeq rerdrknkin tdfqnfvnrv ndlwgqpqfk afdlefdqpm relgfhgvph
      841 kasafivpts nclvelietp fvvitlseie ivnlervglg qknfdmtivf kdfkrdvlri
      901 dsipstsldg ikewlnttdl kyyesrlnln wrpilktitd dpekfiedgg weflnmevsd
      961 sesenseesd qgyvpsdvqs esgsededdd seslvesedd deedsdedse edegktweel
     1021 ereasyadre kgddsdseee rkrrkmkafg kgrvpdkrps snlpkrsklr
//
LOCUS       XP_016674007            1064 aa            linear   PLN 06-AUG-2024
DEFINITION  FACT complex subunit SPT16 [Gossypium hirsutum].
ACCESSION   XP_016674007
VERSION     XP_016674007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818518.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1064
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=119842
     Region          23..951
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1064
                     /gene="LOC107893503"
                     /coded_by="XM_016818518.2:437..3631"
                     /db_xref="GeneID:107893503"
ORIGIN      
        1 mtdhrstngq ppngtapgsg siysinlenf skrlkalysh wnehkaelws ssdvlavatp
       61 ppsedlrylk ssalniwllg yefpetimvf tkkqihflcs qkkasllevv kksakdavgv
      121 dvvmhvkakt ddgtalmdav frsiraqykg sedapffgyi areapegkll etwaeklksa
      181 sfqlvdvtng lsdlfafkdk eehmnvkkaa ylsynvmnnv vvprletvid eekkithatl
      241 mdetekaign pqlakvklkp envdicyppi fqsggefdlr psaasneenl yydsasvilc
      301 avgarynsyc sniartflid atpvqskaye vllkaheaai smlkpgnris aayqaalsvv
      361 ekeapdlvpn ltksagtgig lefresglnl nmknervvka gmvfnvslgf qnlqcasknp
      421 knknfsllla dtvivgeqnt evvtgksska vkdvaysfne deeeedkhvk vetngsdhfm
      481 sktvlrsdnh eiskeelrrq hqaelarqkn eetarrlagg petgdnraia ktaadliayk
      541 nvndlppprd fmiqidqkne avllpiygsm vpfhvatirt vssqqdtnrn cfiriifnvp
      601 gtpfsshdsn slknqgaiyl kevsfrskdp rhisevvqqi ktlrrhvvar esekaeratl
      661 vtqeklqlag nrfkpirlpd lwirpvfggr grkipgtlet hvngfrystt radervdvmy
      721 gnikhaffqp aekemitllh fhlhnhimvg nkktkdvqfy vevmdvvqtl gggkrsaydp
      781 deieeeqrer drknkinmdf qsfvnrvndl wgqpqfngld lefdqplrel gfhgvphkas
      841 afivptsscl velvetpflv vtlseieivn lervglgqkn fdmtivfkdf krdvlridsi
      901 pstsldgike wldttdlkyy esrlnlnwrq ilktitddpq sfienggwef lnleasdses
      961 edeeesdqgy epsdmesese sedddsdsas lvesedeeee dseedseeek gktweelere
     1021 asnadrekgn esdseedrrr rkmkafgksr appssaipkr sklr
//
LOCUS       XP_016674008            1064 aa            linear   PLN 06-AUG-2024
DEFINITION  FACT complex subunit SPT16 [Gossypium hirsutum].
ACCESSION   XP_016674008
VERSION     XP_016674008.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818519.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1064
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=119842
     Region          23..951
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1064
                     /gene="LOC107893503"
                     /coded_by="XM_016818519.2:442..3636"
                     /db_xref="GeneID:107893503"
ORIGIN      
        1 mtdhrstngq ppngtapgsg siysinlenf skrlkalysh wnehkaelws ssdvlavatp
       61 ppsedlrylk ssalniwllg yefpetimvf tkkqihflcs qkkasllevv kksakdavgv
      121 dvvmhvkakt ddgtalmdav frsiraqykg sedapffgyi areapegkll etwaeklksa
      181 sfqlvdvtng lsdlfafkdk eehmnvkkaa ylsynvmnnv vvprletvid eekkithatl
      241 mdetekaign pqlakvklkp envdicyppi fqsggefdlr psaasneenl yydsasvilc
      301 avgarynsyc sniartflid atpvqskaye vllkaheaai smlkpgnris aayqaalsvv
      361 ekeapdlvpn ltksagtgig lefresglnl nmknervvka gmvfnvslgf qnlqcasknp
      421 knknfsllla dtvivgeqnt evvtgksska vkdvaysfne deeeedkhvk vetngsdhfm
      481 sktvlrsdnh eiskeelrrq hqaelarqkn eetarrlagg petgdnraia ktaadliayk
      541 nvndlppprd fmiqidqkne avllpiygsm vpfhvatirt vssqqdtnrn cfiriifnvp
      601 gtpfsshdsn slknqgaiyl kevsfrskdp rhisevvqqi ktlrrhvvar esekaeratl
      661 vtqeklqlag nrfkpirlpd lwirpvfggr grkipgtlet hvngfrystt radervdvmy
      721 gnikhaffqp aekemitllh fhlhnhimvg nkktkdvqfy vevmdvvqtl gggkrsaydp
      781 deieeeqrer drknkinmdf qsfvnrvndl wgqpqfngld lefdqplrel gfhgvphkas
      841 afivptsscl velvetpflv vtlseieivn lervglgqkn fdmtivfkdf krdvlridsi
      901 pstsldgike wldttdlkyy esrlnlnwrq ilktitddpq sfienggwef lnleasdses
      961 edeeesdqgy epsdmesese sedddsdsas lvesedeeee dseedseeek gktweelere
     1021 asnadrekgn esdseedrrr rkmkafgksr appssaipkr sklr
//
LOCUS       XP_016674002             758 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674002
VERSION     XP_016674002.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818513.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..758
                     /product="uncharacterized protein"
                     /calculated_mol_wt=85391
     Region          9..99
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     Region          191..258
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          385..476
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          643..670
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..758
                     /gene="LOC107893500"
                     /coded_by="XM_016818513.2:424..2700"
                     /db_xref="GeneID:107893500"
ORIGIN      
        1 matkkiiaic qsggefqten dgslsyrggd ahaididdqm kfsdfkmeva emfncsfgam
       61 sikyflpgnr ktlitvsndk dlermikfhg dsitadvyiv meengaddvs nmsdsrssrt
      121 tlseavpple lpldvvddtt qpniplgapl didgpnhida hfnlppevls vrplsvvpye
      181 khakaaeqwq dtitgvgqrf stvhefretl rkyaiahqfa fkykkndshr vtvkckaegc
      241 pwrihasrls atqlsicikt mnpthtcggs avtvghqswv asiikeklki fpdykpkdiv
      301 ndikqeygiq lnycqawrgk eiakeqlqgs ykdaygqlpf lcdkimetnp gslatfttke
      361 dssfqrlfia fhaslsgfvq gcrpllflds iplkskyqgi lltataadgn dsvfpvafaf
      421 vdaetndnwh wflsqlksal stscpltfva drqkglresi seifkdsyhg yclhylteql
      481 irdlkgqfsr dvkgimiedl yraafaprpe efhkitegik slsleaynwi mqsepqnwan
      541 slfqgarynh mksnfgelfy swasdadelp itqmvdvirg eimeliyfrr tdsdqwltrl
      601 tpsmeeklek eslkvsalqv qlttgsefev qgestevvdm dgwdcsckgw qltglpccha
      661 iavincigrs pydycsryfs tesyrltyae svkpipdmdw amqndyseav mtvtpptrrp
      721 pgrpttkkvg lqeamkrqlq cskckglghn katckell
//
LOCUS       XP_040941504             758 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941504
VERSION     XP_040941504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085570.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..758
                     /product="uncharacterized protein"
                     /calculated_mol_wt=85391
     Region          9..99
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     Region          191..258
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          385..476
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          643..670
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..758
                     /gene="LOC107893500"
                     /coded_by="XM_041085570.1:406..2682"
                     /db_xref="GeneID:107893500"
ORIGIN      
        1 matkkiiaic qsggefqten dgslsyrggd ahaididdqm kfsdfkmeva emfncsfgam
       61 sikyflpgnr ktlitvsndk dlermikfhg dsitadvyiv meengaddvs nmsdsrssrt
      121 tlseavpple lpldvvddtt qpniplgapl didgpnhida hfnlppevls vrplsvvpye
      181 khakaaeqwq dtitgvgqrf stvhefretl rkyaiahqfa fkykkndshr vtvkckaegc
      241 pwrihasrls atqlsicikt mnpthtcggs avtvghqswv asiikeklki fpdykpkdiv
      301 ndikqeygiq lnycqawrgk eiakeqlqgs ykdaygqlpf lcdkimetnp gslatfttke
      361 dssfqrlfia fhaslsgfvq gcrpllflds iplkskyqgi lltataadgn dsvfpvafaf
      421 vdaetndnwh wflsqlksal stscpltfva drqkglresi seifkdsyhg yclhylteql
      481 irdlkgqfsr dvkgimiedl yraafaprpe efhkitegik slsleaynwi mqsepqnwan
      541 slfqgarynh mksnfgelfy swasdadelp itqmvdvirg eimeliyfrr tdsdqwltrl
      601 tpsmeeklek eslkvsalqv qlttgsefev qgestevvdm dgwdcsckgw qltglpccha
      661 iavincigrs pydycsryfs tesyrltyae svkpipdmdw amqndyseav mtvtpptrrp
      721 pgrpttkkvg lqeamkrqlq cskckglghn katckell
//
LOCUS       XP_016674001             758 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674001
VERSION     XP_016674001.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818512.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..758
                     /product="uncharacterized protein"
                     /calculated_mol_wt=85391
     Region          9..99
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     Region          191..258
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          385..476
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          643..670
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..758
                     /gene="LOC107893500"
                     /coded_by="XM_016818512.2:137..2413"
                     /db_xref="GeneID:107893500"
ORIGIN      
        1 matkkiiaic qsggefqten dgslsyrggd ahaididdqm kfsdfkmeva emfncsfgam
       61 sikyflpgnr ktlitvsndk dlermikfhg dsitadvyiv meengaddvs nmsdsrssrt
      121 tlseavpple lpldvvddtt qpniplgapl didgpnhida hfnlppevls vrplsvvpye
      181 khakaaeqwq dtitgvgqrf stvhefretl rkyaiahqfa fkykkndshr vtvkckaegc
      241 pwrihasrls atqlsicikt mnpthtcggs avtvghqswv asiikeklki fpdykpkdiv
      301 ndikqeygiq lnycqawrgk eiakeqlqgs ykdaygqlpf lcdkimetnp gslatfttke
      361 dssfqrlfia fhaslsgfvq gcrpllflds iplkskyqgi lltataadgn dsvfpvafaf
      421 vdaetndnwh wflsqlksal stscpltfva drqkglresi seifkdsyhg yclhylteql
      481 irdlkgqfsr dvkgimiedl yraafaprpe efhkitegik slsleaynwi mqsepqnwan
      541 slfqgarynh mksnfgelfy swasdadelp itqmvdvirg eimeliyfrr tdsdqwltrl
      601 tpsmeeklek eslkvsalqv qlttgsefev qgestevvdm dgwdcsckgw qltglpccha
      661 iavincigrs pydycsryfs tesyrltyae svkpipdmdw amqndyseav mtvtpptrrp
      721 pgrpttkkvg lqeamkrqlq cskckglghn katckell
//
LOCUS       XP_040941505             758 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941505
VERSION     XP_040941505.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085571.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..758
                     /product="uncharacterized protein"
                     /calculated_mol_wt=85391
     Region          9..99
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     Region          191..258
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          385..476
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          643..670
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..758
                     /gene="LOC107893500"
                     /coded_by="XM_041085571.1:140..2416"
                     /db_xref="GeneID:107893500"
ORIGIN      
        1 matkkiiaic qsggefqten dgslsyrggd ahaididdqm kfsdfkmeva emfncsfgam
       61 sikyflpgnr ktlitvsndk dlermikfhg dsitadvyiv meengaddvs nmsdsrssrt
      121 tlseavpple lpldvvddtt qpniplgapl didgpnhida hfnlppevls vrplsvvpye
      181 khakaaeqwq dtitgvgqrf stvhefretl rkyaiahqfa fkykkndshr vtvkckaegc
      241 pwrihasrls atqlsicikt mnpthtcggs avtvghqswv asiikeklki fpdykpkdiv
      301 ndikqeygiq lnycqawrgk eiakeqlqgs ykdaygqlpf lcdkimetnp gslatfttke
      361 dssfqrlfia fhaslsgfvq gcrpllflds iplkskyqgi lltataadgn dsvfpvafaf
      421 vdaetndnwh wflsqlksal stscpltfva drqkglresi seifkdsyhg yclhylteql
      481 irdlkgqfsr dvkgimiedl yraafaprpe efhkitegik slsleaynwi mqsepqnwan
      541 slfqgarynh mksnfgelfy swasdadelp itqmvdvirg eimeliyfrr tdsdqwltrl
      601 tpsmeeklek eslkvsalqv qlttgsefev qgestevvdm dgwdcsckgw qltglpccha
      661 iavincigrs pydycsryfs tesyrltyae svkpipdmdw amqndyseav mtvtpptrrp
      721 pgrpttkkvg lqeamkrqlq cskckglghn katckell
//
LOCUS       XP_016674003             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674003
VERSION     XP_016674003.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818514.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..235
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25322
     CDS             1..235
                     /gene="LOC107893501"
                     /coded_by="XM_016818514.2:307..1014"
                     /db_xref="GeneID:107893501"
ORIGIN      
        1 matglstrng nigmtlptaa asklnnplls kecsncsghs pffihqvrhl gilrrlctac
       61 vlrlhpssfc pacftfyggs pphpskrvnc snccslthsh cagdtvltsy lcppckdssf
      121 sffplkdnki dkklahallc aakiasfsmg kavtvawaea drkvreaala rkraresleh
      181 llvvarkeka rkeneakved lgvdngdedg dgdgdgdidv dlvrhiedsl vkadd
//
LOCUS       XP_016674000             303 aa            linear   PLN 06-AUG-2024
DEFINITION  G patch domain-containing protein 8 [Gossypium hirsutum].
ACCESSION   XP_016674000
VERSION     XP_016674000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818511.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..303
                     /product="G patch domain-containing protein 8"
                     /calculated_mol_wt=34529
     Region          66..107
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     Region          161..188
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     CDS             1..303
                     /gene="LOC107893499"
                     /coded_by="XM_016818511.2:247..1158"
                     /db_xref="GeneID:107893499"
ORIGIN      
        1 mdyrrynssq eanlgtkqqi seeqayqdsl veelaedfrl pinhkptenv dldnvqqatl
       61 dtklnssnvg frllqkmgwk gkglgkdeqg iiepirsgir dpklgigkqe eddfftaeen
      121 iqrrkldiev eeteehakkr evlaereqki qtevkeirkv fycelcnkqy klamefevhl
      181 ssydhnhrkr fkemremhgs ssrddrqkre qqrqeremak faqmagarkq qqqesreesg
      241 pattpapapa saiataladq eqrktlkfgf ssksssskna sgsavkkpkv avasvfgnds
      301 dde
//
LOCUS       XP_016675516             163 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL80 [Gossypium hirsutum].
ACCESSION   XP_016675516
VERSION     XP_016675516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..163
                     /product="agamous-like MADS-box protein AGL80"
                     /calculated_mol_wt=18703
     Region          3..86
                     /region_name="MADS_SRF_like"
                     /note="SRF-like/Type I subfamily of MADS (MCM1, Agamous,
                     Deficiens, and SRF (serum response factor) box family of
                     eukaryotic transcriptional regulators. Binds DNA and
                     exists as hetero- and homo-dimers. Differs from the
                     MEF-like/Type II subgroup mainly in...; cd00266"
                     /db_xref="CDD:238166"
     Site            order(3,5,19,22..24,27,30..31)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238166"
     Site            order(21,24,28..29,32,35,37..38,44,46,48,55,59,67..68,74,
                     77..78,82)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            order(29..30,33,37,54..61,69,75,78..79,82..83)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238166"
     Site            60
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238166"
     CDS             1..163
                     /gene="LOC107894823"
                     /coded_by="XM_016820027.2:124..615"
                     /db_xref="GeneID:107894823"
ORIGIN      
        1 msrkkmklay itndskrktt ykkrtkglvk kvhelttlcg ieacaiihsp dfdsqpevwp
       61 shvdarrlls efkklpesir nnkmvnqesf leqsiakanq qlwklckenr qkelkkvmfe
      121 slsgkgifqs lnamdlnevg llvnqnlkdi enrvrvltka srs
//
LOCUS       XP_016673997             139 aa            linear   PLN 06-AUG-2024
DEFINITION  subtilisin-like protease SBT6.1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673997
VERSION     XP_016673997.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818508.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673997.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="subtilisin-like protease SBT6.1 isoform X1"
                     /calculated_mol_wt=15331
     Region          1..>138
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     CDS             1..139
                     /gene="LOC107893497"
                     /coded_by="XM_016818508.2:748..1167"
                     /db_xref="GeneID:107893497"
ORIGIN      
        1 maifdtrira dhphfrnike rtnwtnedtl ndnlghgtfv agviagedae clgfapdtei
       61 yafrvftdaq vsytswflda fnyaiainmd vlnlsiggpd yldlpfvekv weitanniim
      121 vsaigndgpl ygtlnnpal
//
LOCUS       XP_040941506             139 aa            linear   PLN 06-AUG-2024
DEFINITION  subtilisin-like protease SBT6.1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941506
VERSION     XP_040941506.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085572.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="subtilisin-like protease SBT6.1 isoform X1"
                     /calculated_mol_wt=15331
     Region          1..>138
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     CDS             1..139
                     /gene="LOC107893497"
                     /coded_by="XM_041085572.1:636..1055"
                     /db_xref="GeneID:107893497"
ORIGIN      
        1 maifdtrira dhphfrnike rtnwtnedtl ndnlghgtfv agviagedae clgfapdtei
       61 yafrvftdaq vsytswflda fnyaiainmd vlnlsiggpd yldlpfvekv weitanniim
      121 vsaigndgpl ygtlnnpal
//
LOCUS       XP_040941507             112 aa            linear   PLN 06-AUG-2024
DEFINITION  subtilisin-like protease SBT6.1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941507
VERSION     XP_040941507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085573.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="subtilisin-like protease SBT6.1 isoform X2"
                     /calculated_mol_wt=12422
     Region          <43..>111
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     CDS             1..112
                     /gene="LOC107893497"
                     /coded_by="XM_041085573.1:35..373"
                     /db_xref="GeneID:107893497"
ORIGIN      
        1 mitldmgplw lvlllvrtqn vlalhqilkf mlsvfllmhs llqvsytswf ldafnyaiai
       61 nmdvlnlsig gpdyldlpfv ekvweitann iimvsaignd gplygtlnnp al
//
LOCUS       XP_016673999              57 aa            linear   PLN 06-AUG-2024
DEFINITION  hydrophobic protein RCI2B [Gossypium hirsutum].
ACCESSION   XP_016673999
VERSION     XP_016673999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..57
                     /product="hydrophobic protein RCI2B"
                     /calculated_mol_wt=6151
     Region          8..57
                     /region_name="YqaE"
                     /note="Membrane potential modulator PMP3/YqaE, plasma
                     membrane proteolipid 3 (PMP3)/Esi3/RCI2/UPF0057 family
                     [Energy production and conversion]; COG0401"
                     /db_xref="CDD:440170"
     CDS             1..57
                     /gene="LOC107893498"
                     /coded_by="XM_016818510.2:141..314"
                     /db_xref="GeneID:107893498"
ORIGIN      
        1 maddstatci dillaiilpp lgvflkfgcq vefwiclvlt lfgyipgiiy aiyaitk
//
LOCUS       XP_016673996             412 aa            linear   PLN 06-AUG-2024
DEFINITION  pectin acetylesterase 12 [Gossypium hirsutum].
ACCESSION   XP_016673996
VERSION     XP_016673996.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818507.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673996.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..412
                     /product="pectin acetylesterase 12"
                     /calculated_mol_wt=46184
     Region          45..391
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..412
                     /gene="LOC107893495"
                     /coded_by="XM_016818507.2:443..1681"
                     /db_xref="GeneID:107893495"
ORIGIN      
        1 mkllwvwvvl pfafaqlvta ffdfnetels liesleygvs kinynplmvg ltlihtagak
       61 gavcldgtlp gyhwhrgygs ganswliqle gggwcnnirt cvyrkktrrg sstymekqip
      121 ftgilsekae enpdffnwnr vklrycdgas ftgdsenkga qlqfrgqriw lagmedlmsk
      181 gmryanqall sgcsagglaa ilhcdefrdl fprttrvkcl sdaglfldav dvsgghtirs
      241 lysgvvglqg vqhnlprict nhldptscff pqnvinhirt plfilnaayd swqiqssiap
      301 psadphgywh dcrlnhakcs asqlrylqgf rtqmlnaikg fsmsrqnglf inscfahcqs
      361 erqdtwfadn speirnkpia iavgdwyfdr tavkvvdcpy pcdktchnlv fr
//
LOCUS       XP_016673995             360 aa            linear   PLN 06-AUG-2024
DEFINITION  plant intracellular Ras-group-related LRR protein 6 [Gossypium
            hirsutum].
ACCESSION   XP_016673995
VERSION     XP_016673995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..360
                     /product="plant intracellular Ras-group-related LRR
                     protein 6"
                     /calculated_mol_wt=40468
     Region          43..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <55..>244
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          68..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          160..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..360
                     /gene="LOC107893494"
                     /coded_by="XM_016818506.2:297..1379"
                     /db_xref="GeneID:107893494"
ORIGIN      
        1 mmyeeqqqqq qqqvmmrmae lnnnnqkgde rsgrrfiede erlnivdlsg msldslpkps
       61 lnlttickln lsnnnlqsip esltarllnv valdvhsnql kflpnsigcl sklktlnvsg
      121 nllqslpkti encrsleeln anfnkltklp etigfelinl kklavnsnkl iflprsithl
      181 tslrvldarl nclralpedl enlinlqiln vsqnfqylqn lpysigllis lleldvsynk
      241 ittlpdsmgc mkklqklsve gnplvsppae vfeqglhavk gylsekmngg hksppkkksw
      301 vgklvkygtf sgytlrgtsn geregffise yrsidglasp rhigmfsprr lfspgryftr
//
LOCUS       XP_016673994             412 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 5 [Gossypium hirsutum].
ACCESSION   XP_016673994
VERSION     XP_016673994.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818505.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..412
                     /product="protein trichome birefringence-like 5"
                     /calculated_mol_wt=47709
     Region          71..122
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          123..407
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..412
                     /gene="LOC107893493"
                     /coded_by="XM_016818505.2:282..1520"
                     /db_xref="GeneID:107893493"
ORIGIN      
        1 mgnsiahktr yaltflcfil lvlftlflft krtlepylsf yqpsfhihss naafidgnqt
       61 ldtahenrem cdlytgtwvk dddypiykpg scpyvdeafd cqsngrpdsn ylrwrwkpdg
      121 cdlprfnatd flerlrgkrl mlvgdsmnrn qfesilcllr egltnkskmy evhgykitke
      181 rgyfifkfed ynctvvfvrs hflvkegiri neqgnsnptl sidkidktsd rwkqadilif
      241 ntahwwvhgk targinyyke gdylypklda veayrralkt warwidenik peaklvlyrg
      301 yssahfrggd wnsggscpge sepilsgavl dmypfkmkiv eeviqemevp villnvtrlt
      361 nsrkdghpgi ygkalkegkt nsmrredcsh wclpgvpdaw neliyatlvf kk
//
LOCUS       XP_016673992             990 aa            linear   PLN 06-AUG-2024
DEFINITION  DExH-box ATP-dependent RNA helicase DExH10 [Gossypium hirsutum].
ACCESSION   XP_016673992
VERSION     XP_016673992.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818503.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673992.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..990
                     /product="DExH-box ATP-dependent RNA helicase DExH10"
                     /calculated_mol_wt=111294
     Region          68..968
                     /region_name="Dob10"
                     /note="Superfamily II RNA helicase [Replication,
                     recombination and repair]; COG4581"
                     /db_xref="CDD:443638"
     CDS             1..990
                     /gene="LOC107893491"
                     /coded_by="XM_016818503.2:600..3572"
                     /db_xref="GeneID:107893491"
ORIGIN      
        1 meeesaapgk rkspeksdvt etpkqesapk rrtlartcvh evavpsgyvs tkdesihgtl
       61 snpayngema ktyqfeldpf qqvsvacler nesvlvsaht sagktavaey aiamafrdkq
      121 rviytsplka lsnqkyrelh qefndvglmt gdvtlspnas clvmtteilr gmlyrgsevl
      181 kevawvifde ihymkdrerg vvweesiifl ppaikmvfls atmsnatefa ewichlhkqp
      241 chvvytdfrp tplqhyvfpm ggsglylvvd eneqfrednf mklqdsfvkq rpgdwsknke
      301 gksggraaks gggsggsdiy kivkmimerk fhpvivfsfs rreceyhams mskldfntke
      361 ekddveqvfr navlclneed rclpaielml pllmrgiavh hsgllpvike lvellfqegl
      421 ikalfatetf amglnmpakt vvftsvkkwd gdshryigsg eyiqmsgrag rrgkdergic
      481 iimvdeqmem ntlkdmvlgk paplvstfrl syysilnlms raegqmtaeh virnsfhqfq
      541 yekalpdigk kvskleqeaa lldasgeaev aeyhklklel aqlekklmse itrpervlyy
      601 ldpgrlikvr egstdwgwgv vvnvvkrtpa glgalpargg gyivdtllhc spgssengvr
      661 pkpcppcpge kgemhvvpvq lplisalski kvsipadlrp pearqsllla vqelgtrfpq
      721 glpklnpvtd mkiedqeive lvkqieehek klfahplhks qdehqirsfq rkaevnheiq
      781 qlkskmrdsq lqkfrdelkn rsrvlkklgh idadgvvqlk graaclidtg dellvtelmf
      841 ngtfndldhh qvaalascfi pvdksseqiq lrteiakplq qlqesarkia eiqheckldv
      901 nideyvestv rpflmdviyc wskgatfaev iqmtdifegs iirsarrlde flnqlraaaq
      961 avgevnlesk faaaseslrr gimfanslyl
//
LOCUS       XP_016673987            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673987
VERSION     XP_016673987.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673987.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X1"
                     /calculated_mol_wt=120851
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          972..1067
                     /region_name="Ubl_USP48"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-specific-processing protease 48 (USP48) and
                     similar proteins; cd01795"
                     /db_xref="CDD:340493"
     CDS             1..1076
                     /gene="LOC107893490"
                     /coded_by="XM_016818498.2:254..3484"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evceeciger escelmqkln yadediyvyl vrgkeapksi lqasessepd
      961 rrtskrsrrt nngnlvnlrv sattsiyqlk mmiweslgvv kenqilhkgs rvidqetatl
     1021 admnifpgdr lwvkdseihe drdiadelsd qkmnveniee gfrgtlltan issqvv
//
LOCUS       XP_016673989            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673989
VERSION     XP_016673989.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818500.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673989.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X1"
                     /calculated_mol_wt=120851
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          972..1067
                     /region_name="Ubl_USP48"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-specific-processing protease 48 (USP48) and
                     similar proteins; cd01795"
                     /db_xref="CDD:340493"
     CDS             1..1076
                     /gene="LOC107893490"
                     /coded_by="XM_016818500.2:596..3826"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evceeciger escelmqkln yadediyvyl vrgkeapksi lqasessepd
      961 rrtskrsrrt nngnlvnlrv sattsiyqlk mmiweslgvv kenqilhkgs rvidqetatl
     1021 admnifpgdr lwvkdseihe drdiadelsd qkmnveniee gfrgtlltan issqvv
//
LOCUS       XP_016673988            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673988
VERSION     XP_016673988.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818499.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673988.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X1"
                     /calculated_mol_wt=120851
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          972..1067
                     /region_name="Ubl_USP48"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-specific-processing protease 48 (USP48) and
                     similar proteins; cd01795"
                     /db_xref="CDD:340493"
     CDS             1..1076
                     /gene="LOC107893490"
                     /coded_by="XM_016818499.2:248..3478"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evceeciger escelmqkln yadediyvyl vrgkeapksi lqasessepd
      961 rrtskrsrrt nngnlvnlrv sattsiyqlk mmiweslgvv kenqilhkgs rvidqetatl
     1021 admnifpgdr lwvkdseihe drdiadelsd qkmnveniee gfrgtlltan issqvv
//
LOCUS       XP_040941509            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941509
VERSION     XP_040941509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085575.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X1"
                     /calculated_mol_wt=120851
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          972..1067
                     /region_name="Ubl_USP48"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-specific-processing protease 48 (USP48) and
                     similar proteins; cd01795"
                     /db_xref="CDD:340493"
     CDS             1..1076
                     /gene="LOC107893490"
                     /coded_by="XM_041085575.1:596..3826"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evceeciger escelmqkln yadediyvyl vrgkeapksi lqasessepd
      961 rrtskrsrrt nngnlvnlrv sattsiyqlk mmiweslgvv kenqilhkgs rvidqetatl
     1021 admnifpgdr lwvkdseihe drdiadelsd qkmnveniee gfrgtlltan issqvv
//
LOCUS       XP_016673990            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673990
VERSION     XP_016673990.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818501.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673990.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X1"
                     /calculated_mol_wt=120851
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          972..1067
                     /region_name="Ubl_USP48"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-specific-processing protease 48 (USP48) and
                     similar proteins; cd01795"
                     /db_xref="CDD:340493"
     CDS             1..1076
                     /gene="LOC107893490"
                     /coded_by="XM_016818501.2:254..3484"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evceeciger escelmqkln yadediyvyl vrgkeapksi lqasessepd
      961 rrtskrsrrt nngnlvnlrv sattsiyqlk mmiweslgvv kenqilhkgs rvidqetatl
     1021 admnifpgdr lwvkdseihe drdiadelsd qkmnveniee gfrgtlltan issqvv
//
LOCUS       XP_040941510            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941510
VERSION     XP_040941510.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085576.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X1"
                     /calculated_mol_wt=120851
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          972..1067
                     /region_name="Ubl_USP48"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-specific-processing protease 48 (USP48) and
                     similar proteins; cd01795"
                     /db_xref="CDD:340493"
     CDS             1..1076
                     /gene="LOC107893490"
                     /coded_by="XM_041085576.1:253..3483"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evceeciger escelmqkln yadediyvyl vrgkeapksi lqasessepd
      961 rrtskrsrrt nngnlvnlrv sattsiyqlk mmiweslgvv kenqilhkgs rvidqetatl
     1021 admnifpgdr lwvkdseihe drdiadelsd qkmnveniee gfrgtlltan issqvv
//
LOCUS       XP_040941511             922 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 26 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941511
VERSION     XP_040941511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085577.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..922
                     /product="ubiquitin carboxyl-terminal hydrolase 26 isoform
                     X2"
                     /calculated_mol_wt=103358
     Region          108..453
                     /region_name="Peptidase_C19L"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02668"
                     /db_xref="CDD:239133"
     Site            order(111,116,361,379)
                     /site_type="active"
                     /db_xref="CDD:239133"
     Region          531..604
                     /region_name="DUSP"
                     /note="DUSP domain; cl12116"
                     /db_xref="CDD:416436"
     Region          640..703
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     Region          770..867
                     /region_name="DUSP"
                     /note="DUSP domain; pfam06337"
                     /db_xref="CDD:399383"
     CDS             1..922
                     /gene="LOC107893490"
                     /coded_by="XM_041085577.1:596..3364"
                     /db_xref="GeneID:107893490"
ORIGIN      
        1 msrpttrskn krhrqvendd ttteilrkih ltgeitdddv nqlymitkpv cqgcrvntkd
       61 dpncfcglip ppngsrkagl wqkmsdiiqa lgpdpckdlr asayspaglt nlgatcyans
      121 ilqclymnks frqgvfsvep dvlnrhpvld qlarlfaqlh askmafidsa pfiktleldn
      181 gvqqdshefl tllfsllerc lsdsqvskar tivqdlfrgs vshvttcsrc gkdseasskm
      241 edfyelelnv kglktleesl tdylsveelh gdnqyfcesc nirvdasrsi klrtlpdvln
      301 fqlkrydflq kttskkkits vfsfpgkldm qgrlskpsqv eliydlsavl ihkgtaansg
      361 hyiahikden tgqwwefdde hvsnlghhpf gegsstsntk snrsdavvhs sctggdgtan
      421 gnhldsiqlq heessvgshi emfsstdaym lmynlsskkn gastmeiegd avflhdgisl
      481 pshlceeitn lnssyvdace qyklkkkrel dhiterrqev rsvlseapvh sveepfywis
      541 tdwlrqwadn isppvldnts iqcshgkipl skagsvkrls sgawtkcsky nggptfakgd
      601 hcldclidva htvvcadsyr drrklmkeia ddvllakckd gayyvskawl qqwvkrknld
      661 apceadagpt msircphghl mpeqaagakr llvpeklwlf fyedaitvkp ddssgcstfp
      721 sdseecpecs ntlsevacle dsrremklkq rqnheklamg ksiplssnck yyllpsswls
      781 kwrsyvtass khtssmepei ldgvinllkc ekhsrllerp pkvaykrgsf fqkssttdrl
      841 tiitendwkc fceewggtee ngisaiielc ssndlaeccg gmrmceqpld lqnelnnene
      901 srqpvirtca evfkhsetsk kl
//
LOCUS       XP_016673986             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g24330 [Gossypium hirsutum].
ACCESSION   XP_016673986
VERSION     XP_016673986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818497.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..397
                     /product="uncharacterized protein At2g24330"
                     /calculated_mol_wt=43686
     Region          282..332
                     /region_name="zinc_ribbon_10"
                     /note="Predicted integral membrane zinc-ribbon
                     metal-binding protein; pfam10058"
                     /db_xref="CDD:401882"
     CDS             1..397
                     /gene="LOC107893489"
                     /coded_by="XM_016818497.2:223..1416"
                     /db_xref="GeneID:107893489"
ORIGIN      
        1 maedkgvsdg eskesspppp vvkkkgkgvl sriwraifgr sgdnfekrle hitkeekavv
       61 arikrrsqaw rtiirhlivf svvleviava yaimmtrsed ldwkmrafrv spmfllpvis
      121 sivysavvki trmcdqrdqk tlenlraerr akidelkekt nyyitqqliq rydpdpaaka
      181 aaatilaskl gadsglkvyl edeskldvlg grsndveivp ssglrkrkhs rsnsagstpl
      241 vhsnegspph pvgnegtqas ehdrqvvdhy hpqgpsvqdg gwlarvaall vgedptqsya
      301 licgnchrhn glarkedfpy ityycphcqa lnkpkqleeh gsrsspimdp lqsgvgdaak
      361 spsgsmaedi lrssspvisg seiekvtekv essdvig
//
LOCUS       XP_016673984             235 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit beta type-6 [Gossypium hirsutum].
ACCESSION   XP_016673984
VERSION     XP_016673984.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818495.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673984.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..235
                     /product="proteasome subunit beta type-6"
                     /calculated_mol_wt=25264
     Region          15..202
                     /region_name="proteasome_beta_type_6"
                     /note="proteasome beta type-6 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03762"
                     /db_xref="CDD:239731"
     Site            order(15,31,33,47,144,181,184..185)
                     /site_type="active"
                     /db_xref="CDD:239731"
     Site            order(33,36,38..43,63,65,80,92,95..96,98..99,102,105,129,
                     131,133..136,139,147..148,150..151,154..156,172,179..182,
                     185..186)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239731"
     CDS             1..235
                     /gene="LOC107893487"
                     /coded_by="XM_016818495.2:371..1078"
                     /db_xref="GeneID:107893487"
ORIGIN      
        1 mdldmnvnap hsmgttiigv tynggvvlga dsrtstgmyv anrasdkitq ltdnvyvcrs
       61 gsaadsqivs dyvryflhqh tiqlgqpatv kvsanlirll synnknmlqt glivggwdky
      121 eggkiygipl ggtlveqpfa iggsgssyly gffdqawkeg mtkeeaeqlv vkavslaiar
      181 dgasggvvrt viinsdgvtr nfypgdklql whdelepqns lldilnapsp epmni
//
LOCUS       XP_016673983             232 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673983
VERSION     XP_016673983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818494.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..232
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25818
     Region          11..216
                     /region_name="DUF599"
                     /note="Protein of unknown function, DUF599; pfam04654"
                     /db_xref="CDD:461381"
     CDS             1..232
                     /gene="LOC107893486"
                     /coded_by="XM_016818494.2:75..773"
                     /db_xref="GeneID:107893486"
ORIGIN      
        1 mewracyldv ilvplsmlip iayhcwlwhk vrtqplatii ginstgrrfw vsaiikdnek
       61 knilavqtlr ntimgstlma ttsillcagl aavisstytv kkplndsifg ahgefmvalk
      121 yvtilciflf sfschtlsir finqvnilin tpqdptsivt phylsdllek gfllntagnr
      181 lfyaalplll wifgpvlvfv gsitivtlly nldfvfgfrr nkqidvggce sg
//
LOCUS       XP_016673980             362 aa            linear   PLN 06-AUG-2024
DEFINITION  replication protein A 32 kDa subunit A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673980
VERSION     XP_016673980.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673980.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="replication protein A 32 kDa subunit A isoform
                     X1"
                     /calculated_mol_wt=40639
     Region          99..359
                     /region_name="RFA2"
                     /note="Single-stranded DNA-binding replication protein A
                     (RPA), medium (30 kD) subunit [DNA replication,
                     recombination, and repair]; COG5235"
                     /db_xref="CDD:227560"
     Region          157..250
                     /region_name="RPA2_DBD_D"
                     /note="A subfamily of OB folds corresponding to the OB
                     fold of the central ssDNA-binding domain (DBD)-D of human
                     RPA2 (also called RPA32). RPA2 is a subunit of Replication
                     protein A (RPA). RPA is a nuclear ssDNA-binding protein
                     (SSB) which appears to be...; cd04478"
                     /db_xref="CDD:239924"
     Site            order(164..166,175..178,180,186..188,190,207,214..216,
                     223..225)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239924"
     Site            order(165,179,181,208,227..228,230,234,236..240,242,244,
                     246..247,250)
                     /site_type="active"
                     /note="trimerization core interface [active]"
                     /db_xref="CDD:239924"
     Site            order(165,179,181,208,234,236,238..239,242,246,250)
                     /site_type="other"
                     /note="RPA2 DBD-D/RPA3 interface [polypeptide binding]"
                     /db_xref="CDD:239924"
     Site            order(227..228,230,237,240,244,247,250)
                     /site_type="other"
                     /note="RPA2 DBD-D/RPA1 DBD-C interface [polypeptide
                     binding]"
                     /db_xref="CDD:239924"
     CDS             1..362
                     /gene="LOC107893482"
                     /coded_by="XM_016818491.2:61..1149"
                     /db_xref="GeneID:107893482"
ORIGIN      
        1 mrvsggnckr gmessngwln rlhtisllrl nvqkeaimel lrmnwrwkir hfprqqnfvg
       61 kkqhstnlch snsrikflki isafrvsnmf sssqfedssp lagggfmssq lggstpssar
      121 irdmqglvpa tvkqiseasq sgdekssfii dgvdvanvtv vgmvfnknsr ssdvrfhldd
      181 gtgriecirw vterldtgdl daledgtyvr vnghlqtfqs krqlnafsvr lvtnfdevtc
      241 hylecihfhl qnskvqskad eapdlsfstp vrgasnghhp astndfsmqy nadglksfdk
      301 lvlnylqqps nidremgihv delsqqlksp lekikdaief lereglvyss iddyhykave
      361 gl
//
LOCUS       XP_016673979             281 aa            linear   PLN 06-AUG-2024
DEFINITION  replication protein A 32 kDa subunit A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673979
VERSION     XP_016673979.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818490.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="replication protein A 32 kDa subunit A isoform
                     X2"
                     /calculated_mol_wt=30864
     Region          11..278
                     /region_name="RFA2"
                     /note="Single-stranded DNA-binding replication protein A
                     (RPA), medium (30 kD) subunit [DNA replication,
                     recombination, and repair]; COG5235"
                     /db_xref="CDD:227560"
     Region          69..162
                     /region_name="RPA2_DBD_D"
                     /note="A subfamily of OB folds corresponding to the OB
                     fold of the central ssDNA-binding domain (DBD)-D of human
                     RPA2 (also called RPA32). RPA2 is a subunit of Replication
                     protein A (RPA). RPA is a nuclear ssDNA-binding protein
                     (SSB) which appears to be...; cd04478"
                     /db_xref="CDD:239924"
     Site            order(76..78,87..90,92,98..100,102,119,126..128,135..137)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239924"
     Site            order(77,91,93,120,139..140,142,146,148..152,154,156,
                     158..159,162)
                     /site_type="active"
                     /note="trimerization core interface [active]"
                     /db_xref="CDD:239924"
     Site            order(77,91,93,120,146,148,150..151,154,158,162)
                     /site_type="other"
                     /note="RPA2 DBD-D/RPA3 interface [polypeptide binding]"
                     /db_xref="CDD:239924"
     Site            order(139..140,142,149,152,156,159,162)
                     /site_type="other"
                     /note="RPA2 DBD-D/RPA1 DBD-C interface [polypeptide
                     binding]"
                     /db_xref="CDD:239924"
     CDS             1..281
                     /gene="LOC107893482"
                     /coded_by="XM_016818490.2:419..1264"
                     /db_xref="GeneID:107893482"
ORIGIN      
        1 mfsssqfeds splagggfms sqlggstpss arirdmqglv patvkqisea sqsgdekssf
       61 iidgvdvanv tvvgmvfnkn srssdvrfhl ddgtgrieci rwvterldtg dldaledgty
      121 vrvnghlqtf qskrqlnafs vrlvtnfdev tchylecihf hlqnskvqsk adegsvlasq
      181 apdlsfstpv rgasnghhpa stndfsmqyn adglksfdkl vlnylqqpsn idremgihvd
      241 elsqqlkspl ekikdaiefl ereglvyssi ddyhykaveg l
//
LOCUS       XP_040941512             244 aa            linear   PLN 06-AUG-2024
DEFINITION  replication protein A 32 kDa subunit A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941512
VERSION     XP_040941512.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085578.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="replication protein A 32 kDa subunit A isoform
                     X3"
                     /calculated_mol_wt=26976
     Region          <33..241
                     /region_name="RFA2"
                     /note="Single-stranded DNA-binding replication protein A
                     (RPA), medium (30 kD) subunit [DNA replication,
                     recombination, and repair]; COG5235"
                     /db_xref="CDD:227560"
     Region          33..125
                     /region_name="RPA2_DBD_D"
                     /note="A subfamily of OB folds corresponding to the OB
                     fold of the central ssDNA-binding domain (DBD)-D of human
                     RPA2 (also called RPA32). RPA2 is a subunit of Replication
                     protein A (RPA). RPA is a nuclear ssDNA-binding protein
                     (SSB) which appears to be...; cd04478"
                     /db_xref="CDD:239924"
     Site            order(39..41,50..53,55,61..63,65,82,89..91,98..100)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239924"
     Site            order(40,54,56,83,102..103,105,109,111..115,117,119,
                     121..122,125)
                     /site_type="active"
                     /note="trimerization core interface [active]"
                     /db_xref="CDD:239924"
     Site            order(40,54,56,83,109,111,113..114,117,121,125)
                     /site_type="other"
                     /note="RPA2 DBD-D/RPA3 interface [polypeptide binding]"
                     /db_xref="CDD:239924"
     Site            order(102..103,105,112,115,119,122,125)
                     /site_type="other"
                     /note="RPA2 DBD-D/RPA1 DBD-C interface [polypeptide
                     binding]"
                     /db_xref="CDD:239924"
     CDS             1..244
                     /gene="LOC107893482"
                     /coded_by="XM_041085578.1:68..802"
                     /db_xref="GeneID:107893482"
ORIGIN      
        1 mfsssqfeds splagggfms sqlggstpss arvtvvgmvf nknsrssdvr fhlddgtgri
       61 ecirwvterl dtgdldaled gtyvrvnghl qtfqskrqln afsvrlvtnf devtchylec
      121 ihfhlqnskv qskadegsvl asqapdlsfs tpvrgasngh hpastndfsm qynadglksf
      181 dklvlnylqq psnidremgi hvdelsqqlk splekikdai eflereglvy ssiddyhyka
      241 vegl
//
LOCUS       XP_016673973             954 aa            linear   PLN 06-AUG-2024
DEFINITION  plasma membrane ATPase 4 [Gossypium hirsutum].
ACCESSION   XP_016673973
VERSION     XP_016673973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818484.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..954
                     /product="plasma membrane ATPase 4"
                     /calculated_mol_wt=105025
     Region          37..809
                     /region_name="ATPase-IIIA_H"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     TIGR01647"
                     /db_xref="CDD:273731"
     CDS             1..954
                     /gene="LOC107893480"
                     /coded_by="XM_016818484.2:264..3128"
                     /db_xref="GeneID:107893480"
ORIGIN      
        1 magnkgisld eiknesvdle ripieevfeq lkctragltt qegnnrlqvf gpnkleekke
       61 skflkflgfm wnplswvmea aavmaialan gggrppdwqd fvgiivllvi nstisfieen
      121 nagnaaaalm anlapktkvl rdgrwseqea ailvpgdiit iklgdivpad arllegdplk
      181 idqsaltges lpvtknpsde vfsgstckqg eieavviatg vhtffgkaah lvdstnqvgh
      241 fqqvltaign fcicsiavgi vielivmypi qrrkyrdgid nllvlliggi piamptvlsv
      301 tmaigshrls qqgaitkrmt aieemagmdv lcsdktgtlt lnkltvdrnl ievfakgvek
      361 eqvllyaara srtenqdaid aaivgmladp kearagirev hflpfnpvdk rtaltyidsd
      421 gkwhraskga peqiitlcnc kadvrnkvha vidkfaergl rslavarqev pektkespga
      481 pwqlvgllpl fdpprhdsae titralnlgv nvkmitgdql aiaketgrrl gmgtnmypss
      541 sllgqdkdss vsalpvdeli ekadgfagvf pehkyeivkr lqerkhicgm tgdgvndapa
      601 lkkadigiav adatdaarsa sdivltepgl sviisavlts raifqrmkny tiyavsitir
      661 ivfgflfial iwkfdfapfm vliiailndg timtiskdrv kpspqpdswk lkeifstgiv
      721 lggylalmtv lffwamkdtd ffsdkfhvrs lrdrpeqmma alylqvsivs qalifvtrsr
      781 swsfverpgl llvtafiaaq lvatliavya nwrfakiqgm gwgwaaviwl yslvtyipld
      841 likfairyvl sgkawdnlle nktafttkkd ygkeereaqw aaaqrtlhgl qppetsnvfn
      901 erssyrelse iaeqakrrae varlrelntl kghvesvvkl kgldidtiqq hytv
//
LOCUS       XP_016673975             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673975
VERSION     XP_016673975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818486.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_016818486.2:813..2261"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_016673974             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673974
VERSION     XP_016673974.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818485.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_016818485.2:384..1832"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_016673976             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673976
VERSION     XP_016673976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818487.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_016818487.2:173..1621"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_040941513             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941513
VERSION     XP_040941513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085579.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_041085579.1:848..2296"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_040941514             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941514
VERSION     XP_040941514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085580.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_041085580.1:173..1621"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_040941515             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941515
VERSION     XP_040941515.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085581.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_041085581.1:311..1759"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_016673977             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673977
VERSION     XP_016673977.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818488.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_016818488.2:146..1594"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_040941516             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941516
VERSION     XP_040941516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085582.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53144
     Region          432..477
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(436,439,454,456,459,462,473,476)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..482
                     /gene="LOC107893481"
                     /coded_by="XM_041085582.1:813..2261"
                     /db_xref="GeneID:107893481"
ORIGIN      
        1 mdeyggkrgv dglgkgsglv lndhvnnrer narfcnrigc garlnsmndt rngcsrngkg
       61 iigsssrvnp tvsnnrkssi npqkklssql etssvrdelq vselipqses gnvdswevrs
      121 ssvasstswr rnmiqrspsa svglatrana sryglrnlrc ksisdvvpsg clssdssirr
      181 redtvktrns dgegsssgss rgkklsgssl egqnngpshg vfisadsrqa rnwrdsgvay
      241 svrtrrsnss ygrrgfpnqa ngnrlssney hvimpqvprs dipinlndpv steiastras
      301 sysqpdnise slldimpssp seigvnrdsf whynidgtge vllalerieq dedltheqll
      361 alettlfldg lnfydqysnm rldidnmsye elldleermg nvstvlseea lskclmksiy
      421 egasvdcdge kdvtkcsicq eeyvngdevg mlqcehryhv tcvqnwlqvk nwcpickfsp
      481 hn
//
LOCUS       XP_016673970             948 aa            linear   PLN 06-AUG-2024
DEFINITION  coatomer subunit beta-1 [Gossypium hirsutum].
ACCESSION   XP_016673970
VERSION     XP_016673970.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818481.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673970.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..948
                     /product="coatomer subunit beta-1"
                     /calculated_mol_wt=105640
     Region          21..470
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          669..807
                     /region_name="Coatamer_beta_C"
                     /note="Coatomer beta C-terminal region; pfam07718"
                     /db_xref="CDD:462245"
     Region          813..940
                     /region_name="Coatomer_b_Cpla"
                     /note="Coatomer beta subunit appendage platform;
                     pfam14806"
                     /db_xref="CDD:434227"
     CDS             1..948
                     /gene="LOC107893479"
                     /coded_by="XM_016818481.2:233..3079"
                     /db_xref="GeneID:107893479"
ORIGIN      
        1 meksctllih fdkgtpaian eikealegnd vsakvdamkk aimlllnget lpqlfitivr
       61 yvlpsedhtf qkllllylei iektdakgrv lpemilicqn lrnnlqhpne yirgvtlrfl
      121 crlneteiie plipsvlqnl ehrhpfirrn ailavmsiyk lpqgdqllvd apdmiekvls
      181 teqdpsakrn aflmlftcaq eratnyllth vdrvsewgel lqmvvlelir kvcrtnrgek
      241 akyikiiial lnspstaviy ecagtlvsls sapsaikaaa ntycqlllsq sdnnvklivl
      301 drlnelkssh rdvmvdlimd vlralsspnl diqrktldiv lelitprnin evvlllkkev
      361 vktqtgelek ngeyrqmliq aihscaikfp evastvvhll mdflgdsnva saidvvvfvr
      421 eiietnpklr vsiitrlldt fyqiraarvc scalwiigey clslsevesa iatikqclgd
      481 lpfysaseeg eatdaskktp qassitissr rpavladgty atqsaaseta fspptivqgs
      541 lasgnlrsll ltgdfflgav vactltklvl rleevqpskv evnkattqtl lilvsmlqlg
      601 qshvlphpid ndsydrivlc mrllcntsde irkiwlqscr qsfvkmlsek qlreteelka
      661 kaqvshaqpd dlidfyhlks rkgmsqlele devqddlkra tgefvkdadd anklnrilql
      721 tgfsdpvyae ayvtvhhydi vldvtvinrt ketlqnlcle latmgdlklv erpqnytlap
      781 esskqikani kvsstetgvi fgnivyetsn vlertvvvln dihidimdyi spavcsdtaf
      841 rtmwaefewe nkvavntviq dekeflnhii ksinmkclta psaldgecgf laanlyaksv
      901 fgedalvnls iekqadgkls gyirirsktq gialslgdki tlkqkggs
//
LOCUS       XP_016673971             948 aa            linear   PLN 06-AUG-2024
DEFINITION  coatomer subunit beta-1 [Gossypium hirsutum].
ACCESSION   XP_016673971
VERSION     XP_016673971.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673971.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..948
                     /product="coatomer subunit beta-1"
                     /calculated_mol_wt=105640
     Region          21..470
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          669..807
                     /region_name="Coatamer_beta_C"
                     /note="Coatomer beta C-terminal region; pfam07718"
                     /db_xref="CDD:462245"
     Region          813..940
                     /region_name="Coatomer_b_Cpla"
                     /note="Coatomer beta subunit appendage platform;
                     pfam14806"
                     /db_xref="CDD:434227"
     CDS             1..948
                     /gene="LOC107893479"
                     /coded_by="XM_016818482.2:233..3079"
                     /db_xref="GeneID:107893479"
ORIGIN      
        1 meksctllih fdkgtpaian eikealegnd vsakvdamkk aimlllnget lpqlfitivr
       61 yvlpsedhtf qkllllylei iektdakgrv lpemilicqn lrnnlqhpne yirgvtlrfl
      121 crlneteiie plipsvlqnl ehrhpfirrn ailavmsiyk lpqgdqllvd apdmiekvls
      181 teqdpsakrn aflmlftcaq eratnyllth vdrvsewgel lqmvvlelir kvcrtnrgek
      241 akyikiiial lnspstaviy ecagtlvsls sapsaikaaa ntycqlllsq sdnnvklivl
      301 drlnelkssh rdvmvdlimd vlralsspnl diqrktldiv lelitprnin evvlllkkev
      361 vktqtgelek ngeyrqmliq aihscaikfp evastvvhll mdflgdsnva saidvvvfvr
      421 eiietnpklr vsiitrlldt fyqiraarvc scalwiigey clslsevesa iatikqclgd
      481 lpfysaseeg eatdaskktp qassitissr rpavladgty atqsaaseta fspptivqgs
      541 lasgnlrsll ltgdfflgav vactltklvl rleevqpskv evnkattqtl lilvsmlqlg
      601 qshvlphpid ndsydrivlc mrllcntsde irkiwlqscr qsfvkmlsek qlreteelka
      661 kaqvshaqpd dlidfyhlks rkgmsqlele devqddlkra tgefvkdadd anklnrilql
      721 tgfsdpvyae ayvtvhhydi vldvtvinrt ketlqnlcle latmgdlklv erpqnytlap
      781 esskqikani kvsstetgvi fgnivyetsn vlertvvvln dihidimdyi spavcsdtaf
      841 rtmwaefewe nkvavntviq dekeflnhii ksinmkclta psaldgecgf laanlyaksv
      901 fgedalvnls iekqadgkls gyirirsktq gialslgdki tlkqkggs
//
LOCUS       XP_016673969             682 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component EXO70A1 [Gossypium hirsutum].
ACCESSION   XP_016673969
VERSION     XP_016673969.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818480.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673969.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..682
                     /product="exocyst complex component EXO70A1"
                     /calculated_mol_wt=76922
     Region          289..647
                     /region_name="Exo70"
                     /note="Exo70 exocyst complex subunit; pfam03081"
                     /db_xref="CDD:460798"
     CDS             1..682
                     /gene="LOC107893478"
                     /coded_by="XM_016818480.2:622..2670"
                     /db_xref="GeneID:107893478"
ORIGIN      
        1 mdqsasgndc knnfcidkli aarkslklsl eksrtlglal ekagprleei nqrlpsleaa
       61 vrpiradkda lvavgghinr avgpaaavlk vfdavhglek sllsdprndl pgylsvlkrl
      121 kealrflgdn cglaiqwled iieylednrv adgmylsnlk tslkglrelq ndgervhldg
      181 glldaaldkl enefrrllte hsvplpmssp slgeqaciap splpvtviqk lqailgrlia
      241 nnrlekciti yvevrssnvr aslkaldldy leisisefnn vqsiegyieq wgkhlefavk
      301 hlfeadfklc ndvferigld vwmgcfakia aqagilaflq fgrtiteskk epvkllklld
      361 ifsslnklrl dfnrlfggaa caeiqnltrd likgvidgaa eifweiffqv elqrqspppq
      421 dgsiprlvsf itdycnellg dnyrpilsqv lvihqswkqk kfqemilvne vlkiikavdl
      481 nletwvkayg natlscvfam nchwhlykhl kgtklgelmg dswlkeheqy keyysaiflr
      541 eswgklpshl sreglilfsg sratardlvk krlktfneaf demfrkqsvw viperdlrek
      601 tcqlivqtvl pvyrsymqty gplvekdass skyakytvqg leqmllslfl prrerygsfk
      661 grptgskidn gvdlrrtasa va
//
LOCUS       XP_040941517             682 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component EXO70A1 [Gossypium hirsutum].
ACCESSION   XP_040941517
VERSION     XP_040941517.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085583.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..682
                     /product="exocyst complex component EXO70A1"
                     /calculated_mol_wt=76951
     Region          290..645
                     /region_name="Exo70"
                     /note="Exo70 exocyst complex subunit; pfam03081"
                     /db_xref="CDD:460798"
     CDS             1..682
                     /gene="LOC107893477"
                     /coded_by="XM_041085583.1:276..2324"
                     /db_xref="GeneID:107893477"
ORIGIN      
        1 mdpsgigndc knefcidnli aarkslklsl eksktlglal ekagprleei nqrlpyleaa
       61 vrpiradkda lvavgghinr avgpaaavlk vfdavhglek sllsdprndl pgylsvlkrl
      121 eealkflgdn cglaiqwled iieylednrv adgrylsnmk tslkglrelq ndgervhldg
      181 glldaaldkl enefrrllme hsvplpmssp slgeqaciap splpvtviqk lqailgrlia
      241 nnrlekciai yvevrssnvr aslkaldldy leisvsefnd mqsiegyigq wgkhlefavk
      301 hlfeaefklc ndvferigld vwmgcfakia aqagilaflq fgktiteskk epikllklld
      361 ifaslnklrl dfnrlfggaa cieiqnltrd likrvidgaa eifweifvqv elqrqspppq
      421 dgsipklvss itdycnkllg ddyrpiltqv lvihqswkhk kfqemilvne vskiikavdl
      481 nldtwmkayg dttlsclfam nchwhlykdl kgtkvgelmg dswlkeheqy keyysavffr
      541 eswaklpvhl sreglimlsg granardlvk krlktfneaf demfrkqsgw viperdlrek
      601 tcqlivqtvl pvyrsymqty gplveqdass skyvkytvqg leqmlhslfl prrerygsfk
      661 grptgskidn gvdlrrtasa va
//
LOCUS       XP_016673968             187 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ22 [Gossypium hirsutum].
ACCESSION   XP_016673968
VERSION     XP_016673968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..187
                     /product="serine/arginine-rich splicing factor RSZ22"
                     /calculated_mol_wt=20882
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          99..113
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..187
                     /gene="LOC107893476"
                     /coded_by="XM_016818479.2:158..721"
                     /db_xref="GeneID:107893476"
ORIGIN      
        1 msrvyvgnld prvserdled efrvfgvirs vwvarrppgy afidfddhrd aedaireldg
       61 kngwrvelsh nsrgrggrgg gggggggggr grsggsdlkc yecgepghfa recrtrggsg
      121 rhrsrspryr rspsygrrsy sprgrsprrr slsprgrnys kspqyrgree vpyangngvr
      181 drhrsrs
//
LOCUS       XP_016673967             707 aa            linear   PLN 06-AUG-2024
DEFINITION  probable cyclic nucleotide-gated ion channel 14 [Gossypium
            hirsutum].
ACCESSION   XP_016673967
VERSION     XP_016673967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..707
                     /product="probable cyclic nucleotide-gated ion channel 14"
                     /calculated_mol_wt=81372
     Region          130..>486
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          477..608
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(547..548,566..568)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(595..597,601..603)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..707
                     /gene="LOC107893475"
                     /coded_by="XM_016818478.2:182..2305"
                     /db_xref="GeneID:107893475"
ORIGIN      
        1 meskmkelvr fnnngstdik kpvpvykatv pllktegghs dsnsnsripk fgkfkvfped
       61 heprkerild pgsetflqwn riflfwclva lfvdplffym psvinkdtts cmdtdlnlgi
      121 ivtcfrtlad afyalqiiik frtayespns rvfrrgelvt dlhmiasryl ksdffidlla
      181 alplpqimiw fiipatrssh gdytnnalvl ivlvqyvppl ylifplssqi ikntgvvtkt
      241 awagaaynll lymlashvlg aswyllsver hvicwkseck ketsplqcnp hyldcgtlgd
      301 ggrrkwengt vvftkchpdn disfdygife ialtkqvlss sflqkyfycl wwglqnlssy
      361 gqalntstfv wetlfailia ilglvlfahl ignmqtylqs itvrleewrl krrdteewmr
      421 hrqlpqdlre rvqcfvqykw latrgvdees ilralppdlr rdiqrhlcld lvrrvpffsq
      481 mddqlldaic erlvsslstq gtyivregdp vtemlfiirg rlescttngg rtgffnsinl
      541 rpgdfcgeel lswallpkss snlpsstrtv rtlveveafv lraedlkfva nqfrrlhskk
      601 lqhtfryhsy hwrtwgacfi qaawrrhvkr tmarnlsvme cdqrqqgeeh svvssksshv
      661 klnlgvtila skfaantrrg aqrmkdvemp klqkpldpdf saepdde
//
LOCUS       XP_016673964             304 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ENHANCED DISEASE RESISTANCE 2-like [Gossypium hirsutum].
ACCESSION   XP_016673964
VERSION     XP_016673964.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818475.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="protein ENHANCED DISEASE RESISTANCE 2-like"
                     /calculated_mol_wt=32991
     Region          49..261
                     /region_name="EDR2_C"
                     /note="Protein ENHANCED DISEASE RESISTANCE 2, C-terminal;
                     pfam07059"
                     /db_xref="CDD:462076"
     CDS             1..304
                     /gene="LOC107893472"
                     /coded_by="XM_016818475.2:191..1105"
                     /db_xref="GeneID:107893472"
ORIGIN      
        1 mcpttkqkhr gsamdsaakp aaslpdwitd singgslrhv dldtgtngwa sppgnlfslr
       61 slnyltkrqk apagdyllsp lgmdwlkstt kldnvlarpd nrvshalkka qsqgksmksf
      121 vfavnlqvpg kdhysavfyf gtedpippgs llyrfvngdd afrnqrfkiv nrivkgpwiv
      181 kkavgnyaac llgkaltcny hrgpnyleid vdisssaian ailhlalgyv tsvtidmgfl
      241 veaqtenelp ekligavrvc qmemssatvv daltpqiqpa aarvmgcskv nhhksgdded
      301 dddk
//
LOCUS       XP_016675231             233 aa            linear   PLN 06-AUG-2024
DEFINITION  large ribosomal RNA subunit accumulation protein YCED homolog 1,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016675231
VERSION     XP_016675231.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819742.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675231.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..233
                     /product="large ribosomal RNA subunit accumulation protein
                     YCED homolog 1, chloroplastic"
                     /calculated_mol_wt=25997
     Region          78..222
                     /region_name="YceD"
                     /note="Large ribosomal RNA subunit accumulation protein
                     YceD; pfam02620"
                     /db_xref="CDD:460623"
     CDS             1..233
                     /gene="LOC107894470"
                     /coded_by="XM_016819742.2:740..1441"
                     /db_xref="GeneID:107894470"
ORIGIN      
        1 mgspwegavi ysrkpsvthm eycttlerlg lgklssdisk srasvmglrv tkdvkdypng
       61 tpvqisidvt rkkqktrldg iiktvislgc nrcgepaaec ifsnfsllls eepieepeii
      121 dmgasfkegf ksfngsnqwv qeddddasid wddrlyfple ekeidiskhi rdlvhleiti
      181 naicdprckg iclkcgtnln tsscsckedv ekkdygplgn lrkqmqqkss ysq
//
LOCUS       XP_016673963             100 aa            linear   PLN 06-AUG-2024
DEFINITION  probable steroid-binding protein 3 [Gossypium hirsutum].
ACCESSION   XP_016673963
VERSION     XP_016673963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818474.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..100
                     /product="probable steroid-binding protein 3"
                     /calculated_mol_wt=10836
     Region          4..66
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     CDS             1..100
                     /gene="LOC107893471"
                     /coded_by="XM_016818474.2:161..463"
                     /db_xref="GeneID:107893471"
ORIGIN      
        1 mdltpqqliq fngsdpskpi yvaingriyd vtagksfygp ggaysmfagk dasralakms
       61 kneedvcpni dglsekemdv lndwvkkfea kypvvgrvvs
//
LOCUS       XP_016673960             644 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane 9 superfamily member 8 [Gossypium hirsutum].
ACCESSION   XP_016673960
VERSION     XP_016673960.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818471.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673960.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..644
                     /product="transmembrane 9 superfamily member 8"
                     /calculated_mol_wt=74202
     Region          62..601
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..644
                     /gene="LOC107893468"
                     /coded_by="XM_016818471.2:184..2118"
                     /db_xref="GeneID:107893468"
ORIGIN      
        1 mesgsrsmhr ltatiiwpil flflihaahc fylpgvaped fqkgdplkvk vnkltsiktq
       61 lpysyyslpf cppekivdsa enlgevlrgd rienspyvfk mrephmctvl critldakta
      121 klfkekidde yrvnmildnl plvvpirrld qdsstvyqlg yhvglkgqys gskeekyfih
      181 nhlaftvkyh rdpqtdsari vgfevkpysi kheyegkwne ksrlttcdph nkrtvvnsnt
      241 pqeveakkei iftydveyqe sdvkwasrwd ayllmnddqi hwfsivnslm ivlflsgmva
      301 mimlrtlyrd isryneletq eeaqeetgwk llhgdvfrpp snsdllcvyv gtgvqflgmv
      361 lvtmifavfg flspsnrggl mtamlllwvf mgifagyasa rlykmfkgae wkklafrtac
      421 mfpgivfaif fvlnaiiwgq kssgavpfgt mfalvlmwfg isvplvfvgg yvgfkkpaie
      481 dpvktnkipr qipeqawymn ptfsiliggi lpfgavfiel ffiltsiwln qfyyifgflf
      541 lvfiillitc aeitivlcyf qlcsedylww wrsyltsgss alylflyttf yfftkleitk
      601 lvsgllyfgy mliasyaffv ltgtigfyac fwftrliyss vkid
//
LOCUS       XP_040941518             643 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane 9 superfamily member 8 [Gossypium hirsutum].
ACCESSION   XP_040941518
VERSION     XP_040941518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085584.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..643
                     /product="transmembrane 9 superfamily member 8"
                     /calculated_mol_wt=74059
     Region          61..600
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..643
                     /gene="LOC107893470"
                     /coded_by="XM_041085584.1:124..2055"
                     /db_xref="GeneID:107893470"
ORIGIN      
        1 mesrsrsmhk ltakicpflf lflahaahcf ylpgvapedf hkgdplkvkv nkltsiktql
       61 pysyyslpfc ppkkivdste nlgevlrgdr ienspyvfkm repqmctvlc ritldaktak
      121 qfkekiddey rvnmildnlp livpirrsdq dsstvyqlgy hvglkgqysg skeeryfihn
      181 hlaftvkyhr dpqtdsariv gfevkpysik heyegewnek srlttcdphn krtvvssntp
      241 qeveakkeii ftydveyqes dvkwasrwda yllmnddqih wfsivnslmi vlflsgmvam
      301 imlrtlyrdi sryneletqe eaqeetgwkl vhgdvfrpps nsdllcvyvg tgvqflgmvl
      361 vtmifavfgf lspsnrgglm tamlllwvfm gnfagyasar lykmfkgaew kklafrtacm
      421 fpgiafaiff vlnaiiwgqk ssgavpfgtm falvlmwfgi svplvfvggy vgfkkpaied
      481 pvktnkiprq ipeqawymnp tfsiliggil pfgavfielf filtsiwlnq fyyifgflfl
      541 vfiillitca eitivlcyfq lcsedylwww rsyltsgssa lylflyatfy fftkleitkl
      601 vsgllyfgym liasyaffvl tgtigfyacf wftrliyssv kid
//
LOCUS       XP_016673961             523 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin C-terminal hydrolase 22 [Gossypium hirsutum].
ACCESSION   XP_016673961
VERSION     XP_016673961.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818472.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673961.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..523
                     /product="ubiquitin C-terminal hydrolase 22"
                     /calculated_mol_wt=59265
     Region          56..116
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          170..502
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(174,179,464,480)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..523
                     /gene="LOC107893469"
                     /coded_by="XM_016818472.2:336..1907"
                     /db_xref="GeneID:107893469"
ORIGIN      
        1 mclrsssyts pnpckhlady klrhafngyd slqnclkttp igrtrvdnhn tktprcnfcn
       61 gyqgrlyicl mcssiscsth illhtqsksg hdvaidiers elycclccdq vydpdfdkvv
      121 vseqikgscp grsnkrrrln sgmeldlkks kqliamrdgr akscyplglr glnnlgntcf
      181 mnsvlqallh applrnyfls dhhnrdeckr rygeklcllc digalvsamf sgdrspyspa
      241 qflyswwqhs snlasyeeqd aheffisvld gihekeskvr nsskddgdcq ciahrafsgl
      301 lrsdvtcttc gftsttydpc vdislnldtv nssaaektgl stlsgclnlf traerlgsds
      361 klhcqncqel rdtskqlsis rlplvlclhi krfehslirk tsrkidqylq fpfaldmtpy
      421 lsssivrsrf gnrmfafece ntdssaeyei faviahsgml esghyvtylh vnnqwykcdd
      481 awicevdegi vrasqcymlf yvqkllyyka nkdlscnvsv esr
//
LOCUS       XP_016673958             274 aa            linear   PLN 06-AUG-2024
DEFINITION  probable CCR4-associated factor 1 homolog 7 [Gossypium hirsutum].
ACCESSION   XP_016673958
VERSION     XP_016673958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..274
                     /product="probable CCR4-associated factor 1 homolog 7"
                     /calculated_mol_wt=31035
     Region          3..267
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; cl23804"
                     /db_xref="CDD:474062"
     CDS             1..274
                     /gene="LOC107893466"
                     /coded_by="XM_016818469.2:436..1260"
                     /db_xref="GeneID:107893466"
ORIGIN      
        1 msglpkgesv hirevwndnl eeefalirei vdsynyvamd tefpgvvlrp vgtfknindy
       61 nyqtlkdnvd mlkliqlglt fsdengnlpt cgtdsfciwq fnfrefnlse difasdsiel
      121 lrqcgidfkk nnekgidvkr fgellmssgv vlnddvhwvt fhsgydfgyl lklltcrslp
      181 dsqagffdli kiyfpmvydi khmmkfcnsl hgglnklael levervgvch qagsdsllts
      241 ctfrklrdnf fngstekyag vlyglgvqng qntn
//
LOCUS       XP_016673957             118 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome B5-like protein [Gossypium hirsutum].
ACCESSION   XP_016673957
VERSION     XP_016673957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818468.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..118
                     /product="cytochrome B5-like protein"
                     /calculated_mol_wt=12948
     Region          <31..>116
                     /region_name="PLN02252"
                     /note="nitrate reductase [NADPH]"
                     /db_xref="CDD:215141"
     CDS             1..118
                     /gene="LOC107893465"
                     /coded_by="XM_016818468.2:189..545"
                     /db_xref="GeneID:107893465"
ORIGIN      
        1 meiaiialil avllgafilv prhgksahkn kvkstvansk asksysktev mlhnkrtdcw
       61 iiikdkvydv tsyveehpgg dailahagdd stegfygpqh atrtfdmidd fyigdlqk
//
LOCUS       XP_016673953            1462 aa            linear   PLN 06-AUG-2024
DEFINITION  CHD3-type chromatin-remodeling factor PICKLE isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673953
VERSION     XP_016673953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818464.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1462
                     /product="CHD3-type chromatin-remodeling factor PICKLE
                     isoform X1"
                     /calculated_mol_wt=166469
     Region          54..95
                     /region_name="PHD"
                     /note="PHD zinc finger; smart00249"
                     /db_xref="CDD:214584"
     Site            order(63..66,70,90)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          98..172
                     /region_name="CD1_tandem"
                     /note="repeat 1 of paired tandem chromodomains; cd18660"
                     /db_xref="CDD:349307"
     Site            order(100,137,139..140,144)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349307"
     Region          190..242
                     /region_name="CD2_tandem"
                     /note="repeat 2 of paired tandem chromodomains; cd18659"
                     /db_xref="CDD:349306"
     Site            order(209,226)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349306"
     Region          284..1101
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     CDS             1..1462
                     /gene="LOC107893464"
                     /coded_by="XM_016818464.2:184..4572"
                     /db_xref="GeneID:107893464"
ORIGIN      
        1 msslverlri rsdrrpvykl desdddadfv sgksgkiegn lekivrtdak ekscqacgeg
       61 enlfscatct yayhpkcllp plkaplpdnw rcpecfspln didkildcem rptvaddnda
      121 sklgskqifv kqylvkwkgl sylhctwvpe kefikafksn prlrtkvnnf hrqvasnnss
      181 eddfvairpe wttvdrilac rgddddekey lvkykelpyd ecywefesdi safepeierf
      241 nkiqsrsrks sasrqksslq navefkkske fqpyehspef lsggslhpyq leglnflrfs
      301 wskqthvila demglgktiq siaflaslfe eniaphlvva plstlrnwer efatwapqmn
      361 vvmyvgtsqa raiireyefy hpknhkkikk kksgqivses kqdrikfdvl ltsyeminld
      421 ttslkpimwe cmivdeghrl knkdsklfls lkqyttnhrt lltgtplqnn ldelfmlmhf
      481 ldagkfgsle efqeqfkdis qemqisrlhd mlaphllrrl kkdvmkqlpp kkelilrvdl
      541 sskqkeyyka iltrnyqilt rrggaqisli nvvmelrklc chpymlegve pdiedaneay
      601 kqllessgkl qlldkmmvkl keqghrvliy sqfqhmldll edyctykkwq yeridgkvgg
      661 aerqiridrf naknssrfcf llstragglg inlatadtvi iydsdwnpha dlqamarahr
      721 lgqtnkvmiy rlvtrrsiee rmmqmtkkkm vlehlvvgrl kaqninqeel ddiirygske
      781 lfadendeag ksgqihydda aidrlldreq adsedasvdd eaddeilkaf kvanyevike
      841 setvaeeetq nvavenkdtt nnsertsywe ellrdryevh kveefnalgk gkrsrkqmvs
      901 vedddlagle dvssdgedfe aevtdadtsa vnqpgrkpyk krirvdntep lplmegegks
      961 frvlgfnqsq raafvqilmr fgvgdfdwke fasrlkqksy deikdygtlf lthiaeditd
     1021 sptfsdgvpk eglriqdvlv riavlllvse kvkdasekpg trlftddimm ryptlkggkf
     1081 wkeehdllll ravlkhgygr wqaivddkdl riqevicqel nlpiinlpip gqagsqvqng
     1141 anttnieptg tqthgngsgn dvggevaqgv adtvnqarvy hdpsilyhfr dmqrrqveyv
     1201 kkrvlllekg lnaeyqkefy gemktnevas eqqengkrva dmsnarttkt psqvtdclpp
     1261 ieviaseeis aaacnndadr lelpqhynki ckilednvhe avqsslnlkk nlhtleeicg
     1321 disrilspae qpvvstaags qscaarsisp pnqqpaivte iemedsqres epekpaivev
     1381 tdkdltssdp lkdsgkiedq dssldpveka adssqtqttg ndvmmeetgk edgtrtqsea
     1441 iaseneresa ekseagvivl dd
//
LOCUS       XP_016673954            1462 aa            linear   PLN 06-AUG-2024
DEFINITION  CHD3-type chromatin-remodeling factor PICKLE isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673954
VERSION     XP_016673954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1462
                     /product="CHD3-type chromatin-remodeling factor PICKLE
                     isoform X1"
                     /calculated_mol_wt=166469
     Region          54..95
                     /region_name="PHD"
                     /note="PHD zinc finger; smart00249"
                     /db_xref="CDD:214584"
     Site            order(63..66,70,90)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          98..172
                     /region_name="CD1_tandem"
                     /note="repeat 1 of paired tandem chromodomains; cd18660"
                     /db_xref="CDD:349307"
     Site            order(100,137,139..140,144)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349307"
     Region          190..242
                     /region_name="CD2_tandem"
                     /note="repeat 2 of paired tandem chromodomains; cd18659"
                     /db_xref="CDD:349306"
     Site            order(209,226)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349306"
     Region          284..1101
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     CDS             1..1462
                     /gene="LOC107893464"
                     /coded_by="XM_016818465.2:152..4540"
                     /db_xref="GeneID:107893464"
ORIGIN      
        1 msslverlri rsdrrpvykl desdddadfv sgksgkiegn lekivrtdak ekscqacgeg
       61 enlfscatct yayhpkcllp plkaplpdnw rcpecfspln didkildcem rptvaddnda
      121 sklgskqifv kqylvkwkgl sylhctwvpe kefikafksn prlrtkvnnf hrqvasnnss
      181 eddfvairpe wttvdrilac rgddddekey lvkykelpyd ecywefesdi safepeierf
      241 nkiqsrsrks sasrqksslq navefkkske fqpyehspef lsggslhpyq leglnflrfs
      301 wskqthvila demglgktiq siaflaslfe eniaphlvva plstlrnwer efatwapqmn
      361 vvmyvgtsqa raiireyefy hpknhkkikk kksgqivses kqdrikfdvl ltsyeminld
      421 ttslkpimwe cmivdeghrl knkdsklfls lkqyttnhrt lltgtplqnn ldelfmlmhf
      481 ldagkfgsle efqeqfkdis qemqisrlhd mlaphllrrl kkdvmkqlpp kkelilrvdl
      541 sskqkeyyka iltrnyqilt rrggaqisli nvvmelrklc chpymlegve pdiedaneay
      601 kqllessgkl qlldkmmvkl keqghrvliy sqfqhmldll edyctykkwq yeridgkvgg
      661 aerqiridrf naknssrfcf llstragglg inlatadtvi iydsdwnpha dlqamarahr
      721 lgqtnkvmiy rlvtrrsiee rmmqmtkkkm vlehlvvgrl kaqninqeel ddiirygske
      781 lfadendeag ksgqihydda aidrlldreq adsedasvdd eaddeilkaf kvanyevike
      841 setvaeeetq nvavenkdtt nnsertsywe ellrdryevh kveefnalgk gkrsrkqmvs
      901 vedddlagle dvssdgedfe aevtdadtsa vnqpgrkpyk krirvdntep lplmegegks
      961 frvlgfnqsq raafvqilmr fgvgdfdwke fasrlkqksy deikdygtlf lthiaeditd
     1021 sptfsdgvpk eglriqdvlv riavlllvse kvkdasekpg trlftddimm ryptlkggkf
     1081 wkeehdllll ravlkhgygr wqaivddkdl riqevicqel nlpiinlpip gqagsqvqng
     1141 anttnieptg tqthgngsgn dvggevaqgv adtvnqarvy hdpsilyhfr dmqrrqveyv
     1201 kkrvlllekg lnaeyqkefy gemktnevas eqqengkrva dmsnarttkt psqvtdclpp
     1261 ieviaseeis aaacnndadr lelpqhynki ckilednvhe avqsslnlkk nlhtleeicg
     1321 disrilspae qpvvstaags qscaarsisp pnqqpaivte iemedsqres epekpaivev
     1381 tdkdltssdp lkdsgkiedq dssldpveka adssqtqttg ndvmmeetgk edgtrtqsea
     1441 iaseneresa ekseagvivl dd
//
LOCUS       XP_016673955            1305 aa            linear   PLN 06-AUG-2024
DEFINITION  CHD3-type chromatin-remodeling factor PICKLE isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673955
VERSION     XP_016673955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818466.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1305
                     /product="CHD3-type chromatin-remodeling factor PICKLE
                     isoform X2"
                     /calculated_mol_wt=150192
     Region          54..95
                     /region_name="PHD"
                     /note="PHD zinc finger; smart00249"
                     /db_xref="CDD:214584"
     Site            order(63..66,70,90)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          98..172
                     /region_name="CD1_tandem"
                     /note="repeat 1 of paired tandem chromodomains; cd18660"
                     /db_xref="CDD:349307"
     Site            order(100,137,139..140,144)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349307"
     Region          190..242
                     /region_name="CD2_tandem"
                     /note="repeat 2 of paired tandem chromodomains; cd18659"
                     /db_xref="CDD:349306"
     Site            order(209,226)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349306"
     Region          284..1101
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     CDS             1..1305
                     /gene="LOC107893464"
                     /coded_by="XM_016818466.2:184..4101"
                     /db_xref="GeneID:107893464"
ORIGIN      
        1 msslverlri rsdrrpvykl desdddadfv sgksgkiegn lekivrtdak ekscqacgeg
       61 enlfscatct yayhpkcllp plkaplpdnw rcpecfspln didkildcem rptvaddnda
      121 sklgskqifv kqylvkwkgl sylhctwvpe kefikafksn prlrtkvnnf hrqvasnnss
      181 eddfvairpe wttvdrilac rgddddekey lvkykelpyd ecywefesdi safepeierf
      241 nkiqsrsrks sasrqksslq navefkkske fqpyehspef lsggslhpyq leglnflrfs
      301 wskqthvila demglgktiq siaflaslfe eniaphlvva plstlrnwer efatwapqmn
      361 vvmyvgtsqa raiireyefy hpknhkkikk kksgqivses kqdrikfdvl ltsyeminld
      421 ttslkpimwe cmivdeghrl knkdsklfls lkqyttnhrt lltgtplqnn ldelfmlmhf
      481 ldagkfgsle efqeqfkdis qemqisrlhd mlaphllrrl kkdvmkqlpp kkelilrvdl
      541 sskqkeyyka iltrnyqilt rrggaqisli nvvmelrklc chpymlegve pdiedaneay
      601 kqllessgkl qlldkmmvkl keqghrvliy sqfqhmldll edyctykkwq yeridgkvgg
      661 aerqiridrf naknssrfcf llstragglg inlatadtvi iydsdwnpha dlqamarahr
      721 lgqtnkvmiy rlvtrrsiee rmmqmtkkkm vlehlvvgrl kaqninqeel ddiirygske
      781 lfadendeag ksgqihydda aidrlldreq adsedasvdd eaddeilkaf kvanyevike
      841 setvaeeetq nvavenkdtt nnsertsywe ellrdryevh kveefnalgk gkrsrkqmvs
      901 vedddlagle dvssdgedfe aevtdadtsa vnqpgrkpyk krirvdntep lplmegegks
      961 frvlgfnqsq raafvqilmr fgvgdfdwke fasrlkqksy deikdygtlf lthiaeditd
     1021 sptfsdgvpk eglriqdvlv riavlllvse kvkdasekpg trlftddimm ryptlkggkf
     1081 wkeehdllll ravlkhgygr wqaivddkdl riqevicqel nlpiinlpip gqagsqvqng
     1141 anttnieptg tqthgngsgn dvggevaqgv adtvnqarvy hdpsilyhfr dmqrrqveyv
     1201 kkrvlllekg lnaeyqkefy gemktnevas eqqengkrva dmsnarttkt psqvtdclpp
     1261 ielqkkfqql lattmqidwn clsitirfar ywrtmfmkqf sqasi
//
LOCUS       XP_016673956            1287 aa            linear   PLN 06-AUG-2024
DEFINITION  CHD3-type chromatin-remodeling factor PICKLE isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016673956
VERSION     XP_016673956.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818467.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1287
                     /product="CHD3-type chromatin-remodeling factor PICKLE
                     isoform X3"
                     /calculated_mol_wt=146080
     Region          109..926
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     CDS             1..1287
                     /gene="LOC107893464"
                     /coded_by="XM_016818467.2:248..4111"
                     /db_xref="GeneID:107893464"
ORIGIN      
        1 mtllpldlsg lqliafllag emmmtrrstl ssiknfpmmn vigslnqiyl hlnpklrdli
       61 kfnpdlvnll lvgkkaafkm llssrsqrnf nhmnivlnff lehfhgvlgs lhpyqlegln
      121 flrfswskqt hvilademgl gktiqsiafl aslfeeniap hlvvaplstl rnwerefatw
      181 apqmnvvmyv gtsqaraiir eyefyhpknh kkikkkksgq ivseskqdri kfdvlltsye
      241 minldttslk pimwecmivd eghrlknkds klflslkqyt tnhrtlltgt plqnnldelf
      301 mlmhfldagk fgsleefqeq fkdisqemqi srlhdmlaph llrrlkkdvm kqlppkkeli
      361 lrvdlsskqk eyykailtrn yqiltrrgga qislinvvme lrklcchpym legvepdied
      421 aneaykqlle ssgklqlldk mmvklkeqgh rvliysqfqh mldlledyct ykkwqyerid
      481 gkvggaerqi ridrfnakns srfcfllstr agglginlat adtviiydsd wnphadlqam
      541 arahrlgqtn kvmiyrlvtr rsieermmqm tkkkmvlehl vvgrlkaqni nqeelddiir
      601 ygskelfade ndeagksgqi hyddaaidrl ldreqadsed asvddeadde ilkafkvany
      661 evikesetva eeetqnvave nkdttnnser tsyweellrd ryevhkveef nalgkgkrsr
      721 kqmvsveddd lagledvssd gedfeaevtd adtsavnqpg rkpykkrirv dnteplplme
      781 gegksfrvlg fnqsqraafv qilmrfgvgd fdwkefasrl kqksydeikd ygtlflthia
      841 editdsptfs dgvpkeglri qdvlvriavl llvsekvkda sekpgtrlft ddimmryptl
      901 kggkfwkeeh dllllravlk hgygrwqaiv ddkdlriqev icqelnlpii nlpipgqags
      961 qvqnganttn ieptgtqthg ngsgndvgge vaqgvadtvn qarvyhdpsi lyhfrdmqrr
     1021 qveyvkkrvl llekglnaey qkefygemkt nevaseqqen gkrvadmsna rttktpsqvt
     1081 dclppievia seeisaaacn ndadrlelpq hynkickile dnvheavqss lnlkknlhtl
     1141 eeicgdisri lspaeqpvvs taagsqscaa rsisppnqqp aivteiemed sqresepekp
     1201 aivevtdkdl tssdplkdsg kiedqdssld pvekaadssq tqttgndvmm eetgkedgtr
     1261 tqseaiasen eresaeksea gvivldd
//
LOCUS       XP_016673951             482 aa            linear   PLN 06-AUG-2024
DEFINITION  brassinosteroid-related acyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016673951
VERSION     XP_016673951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..482
                     /product="brassinosteroid-related acyltransferase 1"
                     /calculated_mol_wt=52748
     Region          32..473
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..482
                     /gene="LOC107893463"
                     /coded_by="XM_016818462.2:52..1500"
                     /db_xref="GeneID:107893463"
ORIGIN      
        1 matkkhddhe nyptvlvtkt vtvhpkpllh hpqqilhlsn ldrqcpmlmy vvffykpcfa
       61 yqnlslgsif nslksgleet lsiwypaagr lslnqadgkl nlwcnnggav laeavttaki
      121 iqlgdlsqyk efferlaykp vfqgnfsqmp livaqitrfg cggysisiga shslfdgpat
      181 ydflrawasn sailkekrst lqiyepvher gpllvgtqhg qqqltklpes gssaptrgaa
      241 aidhlhqlik qalagpdmkf ggsnfsntgn snlvlktfhl sgamieslki kvfggesrgs
      301 fsfssfelia ahlwkartka lgvkkgamvc lqfavdlrnk mvpplpkgfs gnafvlasia
      361 ltaeqlegss heaiiekikq aknsitndyv iaynkaldgg aaqgslppin eltlvsdwtr
      421 mpfhtidflh geaayvspll spipqvayfm qnpndlrgig vriglppqfl nafshyfltn
      481 lq
//
LOCUS       XP_016673949             613 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ARR12 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673949
VERSION     XP_016673949.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818460.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673949.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..613
                     /product="two-component response regulator ARR12 isoform
                     X1"
                     /calculated_mol_wt=66501
     Region          20..134
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     Region          199..252
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..613
                     /gene="LOC107893462"
                     /coded_by="XM_016818460.2:417..2258"
                     /db_xref="GeneID:107893462"
ORIGIN      
        1 mtveqigseg kdqfpigmrv lavdddptcl lllgtllrrc qyhvtttsqa ktalkmlren
       61 knkfdlvisd vhmpdmdgfk llehvglemd lpvimlsang dtklvmkgit hgacdyllkp
      121 vrieelqniw qhvvrrkkkd rcnsgskekp hpdsgeaagi gnvdnngkln kkrkdqnede
      181 dyerdenghd nedpsaqkkp rvvwsvelhr kfvaavnqlg idkavpkkil elmnvekltr
      241 envashlqkf rlylkriscv anqqanmaaa lgtadsaylr mgslnglgnf htlagsdqlh
      301 naafrsfpps gvlgrlntpa glgirglpsp gtiqlghvqn sgnptndlsk lqsfvpgnhn
      361 tnilqgmpms leldrlqhnk svghigelpt tdsttvfpgs gnlvdaritg fsnnpllgvt
      421 snslmlegss qqatshtsvs aigfqngnal sdftsiapas nqlqdskags qgqaspincn
      481 agqiirsapq ewnaprkdap yqshasinss ipinsamiql gqcldrnnsi fhkttdldsv
      541 gplnfvdpls ikhgegdnsi mepsviekeg ylmfqprphg shvpdnigsl edlasammkq
      601 eggcngyslr tsi
//
LOCUS       XP_016673950             607 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ARR12 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673950
VERSION     XP_016673950.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673950.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..607
                     /product="two-component response regulator ARR12 isoform
                     X2"
                     /calculated_mol_wt=65847
     Region          20..134
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     Region          199..252
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..607
                     /gene="LOC107893462"
                     /coded_by="XM_016818461.2:349..2172"
                     /db_xref="GeneID:107893462"
ORIGIN      
        1 mtveqigseg kdqfpigmrv lavdddptcl lllgtllrrc qyhvtttsqa ktalkmlren
       61 knkfdlvisd vhmpdmdgfk llehvglemd lpvimlsang dtklvmkgit hgacdyllkp
      121 vrieelqniw qhvvrrkkkd rcnsgskekp hpdsgeaagi gnvdnngkln kkrkdqnede
      181 dyerdenghd nedpsaqkkp rvvwsvelhr kfvaavnqlg idkavpkkil elmnvekltr
      241 envashlqkf rlylkriscv anqqanmaaa lgtadsaylr mgslnglgnf htlagsdqlh
      301 naafrsfpps gvlgrlntpa glgirglpsp gtiqlghvqn sgnptndlsk lqsfvpgnhn
      361 tnilqgmpms leldrlqhnk svghigelpt tdsttvfpgs gnlvdaritg fsnnpllgvt
      421 snslmlegss qqatshtsvs aigfqngnal sdftsiapas nqlqdskags qgqaspincn
      481 agqiirsapq ewnaprkdap yqshasinss ipinsamiql gqcldrnnsi fhkttdldsv
      541 gplnfvdpls ikhgegdnsi mepsviekeg ylmfqprphg shvpdnigsl edlasammkq
      601 adatvil
//
LOCUS       XP_016673948             253 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein 3 [Gossypium hirsutum].
ACCESSION   XP_016673948
VERSION     XP_016673948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818459.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..253
                     /product="zinc finger protein 3"
                     /calculated_mol_wt=28028
     CDS             1..253
                     /gene="LOC107893461"
                     /coded_by="XM_016818459.2:92..853"
                     /db_xref="GeneID:107893461"
ORIGIN      
        1 meylrkepsp sessscilst pddreqeakp slqldlnlat sdcdrvlnqe alnlidslkn
       61 stgssdsttt qptdgeqrvf scnycqrkfy ssqalgghqn ahkrertlak rgqrmgthia
      121 afghpyfhhh hhhnhyssla slplngaynr slgiqvhsmi hkpshvssst gfygrhswsr
      181 ppieqqpaig klsmenphtt nivspagkfn vmrtmmggsq adevigncwr ssgtslnvnq
      241 edqihkvdls lkl
//
LOCUS       XP_040941519             234 aa            linear   PLN 06-AUG-2024
DEFINITION  deSI-like protein At4g17486 [Gossypium hirsutum].
ACCESSION   XP_040941519
VERSION     XP_040941519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085585.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..234
                     /product="deSI-like protein At4g17486"
                     /calculated_mol_wt=26057
     Region          18..152
                     /region_name="Peptidase_C97"
                     /note="PPPDE putative peptidase domain; pfam05903"
                     /db_xref="CDD:461775"
     CDS             1..234
                     /gene="LOC107893459"
                     /coded_by="XM_041085585.1:78..782"
                     /db_xref="GeneID:107893459"
ORIGIN      
        1 mlcrmvlmpr kkkvgsvpvy lnvydltpin gyaywfglgi yhsgvqvhgv eygfgahehs
       61 ttgifevepk qcpgftfrks iligrtdlgp kdvrsfmekl akeysgnsyh litkncnhfc
      121 ndvciqlvgk piprwvnrla rlgflcncvl paglnetkvr qvrsespgqe vekkklrshs
      181 nryipssttp lppsltcppd sttttngrqk rrlrsssqss lihtsstssl slkv
//
LOCUS       XP_016673946             234 aa            linear   PLN 06-AUG-2024
DEFINITION  deSI-like protein At4g17486 [Gossypium hirsutum].
ACCESSION   XP_016673946
VERSION     XP_016673946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818457.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..234
                     /product="deSI-like protein At4g17486"
                     /calculated_mol_wt=26057
     Region          18..152
                     /region_name="Peptidase_C97"
                     /note="PPPDE putative peptidase domain; pfam05903"
                     /db_xref="CDD:461775"
     CDS             1..234
                     /gene="LOC107893459"
                     /coded_by="XM_016818457.2:143..847"
                     /db_xref="GeneID:107893459"
ORIGIN      
        1 mlcrmvlmpr kkkvgsvpvy lnvydltpin gyaywfglgi yhsgvqvhgv eygfgahehs
       61 ttgifevepk qcpgftfrks iligrtdlgp kdvrsfmekl akeysgnsyh litkncnhfc
      121 ndvciqlvgk piprwvnrla rlgflcncvl paglnetkvr qvrsespgqe vekkklrshs
      181 nryipssttp lppsltcppd sttttngrqk rrlrsssqss lihtsstssl slkv
//
LOCUS       XP_016673947             234 aa            linear   PLN 06-AUG-2024
DEFINITION  deSI-like protein At4g17486 [Gossypium hirsutum].
ACCESSION   XP_016673947
VERSION     XP_016673947.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818458.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..234
                     /product="deSI-like protein At4g17486"
                     /calculated_mol_wt=26057
     Region          18..152
                     /region_name="Peptidase_C97"
                     /note="PPPDE putative peptidase domain; pfam05903"
                     /db_xref="CDD:461775"
     CDS             1..234
                     /gene="LOC107893459"
                     /coded_by="XM_016818458.2:115..819"
                     /db_xref="GeneID:107893459"
ORIGIN      
        1 mlcrmvlmpr kkkvgsvpvy lnvydltpin gyaywfglgi yhsgvqvhgv eygfgahehs
       61 ttgifevepk qcpgftfrks iligrtdlgp kdvrsfmekl akeysgnsyh litkncnhfc
      121 ndvciqlvgk piprwvnrla rlgflcncvl paglnetkvr qvrsespgqe vekkklrshs
      181 nryipssttp lppsltcppd sttttngrqk rrlrsssqss lihtsstssl slkv
//
LOCUS       XP_016673942             441 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673942
VERSION     XP_016673942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818453.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..441
                     /product="homeobox protein knotted-1-like 3 isoform X1"
                     /calculated_mol_wt=48536
     Region          165..204
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          223..274
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          332..353
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Site            order(355..359,361,381,387,400,402..403,406..407,409..411,
                     413..414)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(357,360,403,406..407,410)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          373..411
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..441
                     /gene="LOC107893457"
                     /coded_by="XM_016818453.2:323..1648"
                     /db_xref="GeneID:107893457"
ORIGIN      
        1 mafhhnnhls dhhqdlplhh ltehhhqqas qlsetngpnw lntallrsqq pqpaqphssq
       61 faepnflnlh ttraasdstt gsqapnqwls rtsssllhrn hsdviddvga ageaargggg
      121 esmvamesgg sgnnngimnn nksegvvves gggsgdgvvn wqnarykadi lahplceqll
      181 sahvaclrva tpvdqlprid aqlaqsqhvv akysslsggs qgvvaddkel dqflthyvll
      241 lcsfkeqlqq hvrvhameav macweieqsl qsltgvspge gtgatmsddd ddqvdsdanl
      301 fdgslegpds mgfgpliltd sekslmervr helkhelkqg ykekivdire eilrkrragk
      361 lpgdttsvlk awwqlhskwp ypteedkarl vqetglqlkq innwfinqrk rnwnsnpsts
      421 tvskskrkrs nagenngdrf m
//
LOCUS       XP_016673943             440 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673943
VERSION     XP_016673943.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818454.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..440
                     /product="homeobox protein knotted-1-like 4 isoform X2"
                     /calculated_mol_wt=48380
     Region          165..204
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          223..274
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          332..353
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Site            order(355..359,361,381,387,400,402..403,406..407,409..411,
                     413..414)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(357,360,403,406..407,410)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          373..411
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..440
                     /gene="LOC107893457"
                     /coded_by="XM_016818454.2:332..1654"
                     /db_xref="GeneID:107893457"
ORIGIN      
        1 mafhhnnhls dhhqdlplhh ltehhhqqas qlsetngpnw lntallrsqq pqpaqphssq
       61 faepnflnlh ttraasdstt gsqapnqwls rtsssllhrn hsdviddvga ageaargggg
      121 esmvamesgg sgnnngimnn nksegvvves gggsgdgvvn wqnarykadi lahplceqll
      181 sahvaclrva tpvdqlprid aqlaqsqhvv akysslsggs qgvvaddkel dqflthyvll
      241 lcsfkeqlqq hvrvhameav macweieqsl qsltgvspge gtgatmsddd ddqvdsdanl
      301 fdgslegpds mgfgpliltd sekslmervr helkhelkqg ykekivdire eilrkrragk
      361 lpgdttsvlk awwqlhskwp ypteedkarl vqetglqlkq innwfinqrk rnwnsnpsts
      421 tvskskrksn agenngdrfm
//
LOCUS       XP_016673944             429 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016673944
VERSION     XP_016673944.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818455.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..429
                     /product="homeobox protein knotted-1-like 3 isoform X3"
                     /calculated_mol_wt=47243
     Region          165..204
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          223..274
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          332..353
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Site            order(355..359,361,381,387,400,402..403,406..407,409..411,
                     413..414)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(357,360,403,406..407,410)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          373..411
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..429
                     /gene="LOC107893457"
                     /coded_by="XM_016818455.2:332..1621"
                     /db_xref="GeneID:107893457"
ORIGIN      
        1 mafhhnnhls dhhqdlplhh ltehhhqqas qlsetngpnw lntallrsqq pqpaqphssq
       61 faepnflnlh ttraasdstt gsqapnqwls rtsssllhrn hsdviddvga ageaargggg
      121 esmvamesgg sgnnngimnn nksegvvves gggsgdgvvn wqnarykadi lahplceqll
      181 sahvaclrva tpvdqlprid aqlaqsqhvv akysslsggs qgvvaddkel dqflthyvll
      241 lcsfkeqlqq hvrvhameav macweieqsl qsltgvspge gtgatmsddd ddqvdsdanl
      301 fdgslegpds mgfgpliltd sekslmervr helkhelkqg ykekivdire eilrkrragk
      361 lpgdttsvlk awwqlhskwp ypteedkarl vqetglqlkq innwfinqrk rnwnsnpsts
      421 tvskskrkr
//
LOCUS       XP_040941520             248 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941520
VERSION     XP_040941520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085586.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="transcription factor GTE10 isoform X1"
                     /calculated_mol_wt=27065
     Region          11..74
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <158..236
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            190..198
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..248
                     /gene="LOC107893456"
                     /coded_by="XM_041085586.1:526..1272"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mvkpepirhi mtdrekhnls tklesllgel penivdflke qsssdgqmge deieididal
       61 shetlyklgk llddyllkkq knqakaesce iellnesgfs nssmqpckgn dqidevvdiv
      121 gssyppvaie kelthrnsrc csssgssges gfsssastkg aaifsgadrs vtekmyeygk
      181 nlglsfqvvd dildftqsae qlgkpassdl akgnltalvi ftlekepklr diiesdsarl
      241 vplkkqsn
//
LOCUS       XP_016673938             248 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673938
VERSION     XP_016673938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818449.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="transcription factor GTE10 isoform X1"
                     /calculated_mol_wt=27065
     Region          11..74
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <158..236
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            190..198
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..248
                     /gene="LOC107893456"
                     /coded_by="XM_016818449.2:388..1134"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mvkpepirhi mtdrekhnls tklesllgel penivdflke qsssdgqmge deieididal
       61 shetlyklgk llddyllkkq knqakaesce iellnesgfs nssmqpckgn dqidevvdiv
      121 gssyppvaie kelthrnsrc csssgssges gfsssastkg aaifsgadrs vtekmyeygk
      181 nlglsfqvvd dildftqsae qlgkpassdl akgnltalvi ftlekepklr diiesdsarl
      241 vplkkqsn
//
LOCUS       XP_016673940             248 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673940
VERSION     XP_016673940.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818451.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="transcription factor GTE10 isoform X1"
                     /calculated_mol_wt=27065
     Region          11..74
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <158..236
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            190..198
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..248
                     /gene="LOC107893456"
                     /coded_by="XM_016818451.2:427..1173"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mvkpepirhi mtdrekhnls tklesllgel penivdflke qsssdgqmge deieididal
       61 shetlyklgk llddyllkkq knqakaesce iellnesgfs nssmqpckgn dqidevvdiv
      121 gssyppvaie kelthrnsrc csssgssges gfsssastkg aaifsgadrs vtekmyeygk
      181 nlglsfqvvd dildftqsae qlgkpassdl akgnltalvi ftlekepklr diiesdsarl
      241 vplkkqsn
//
LOCUS       XP_040941521             248 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941521
VERSION     XP_040941521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085587.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="transcription factor GTE10 isoform X1"
                     /calculated_mol_wt=27065
     Region          11..74
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <158..236
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            190..198
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..248
                     /gene="LOC107893456"
                     /coded_by="XM_041085587.1:565..1311"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mvkpepirhi mtdrekhnls tklesllgel penivdflke qsssdgqmge deieididal
       61 shetlyklgk llddyllkkq knqakaesce iellnesgfs nssmqpckgn dqidevvdiv
      121 gssyppvaie kelthrnsrc csssgssges gfsssastkg aaifsgadrs vtekmyeygk
      181 nlglsfqvvd dildftqsae qlgkpassdl akgnltalvi ftlekepklr diiesdsarl
      241 vplkkqsn
//
LOCUS       XP_040941522             201 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941522
VERSION     XP_040941522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085588.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..201
                     /product="transcription factor GTE10 isoform X2"
                     /calculated_mol_wt=21692
     Region          <2..27
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <111..189
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            143..151
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..201
                     /gene="LOC107893456"
                     /coded_by="XM_041085588.1:328..933"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mgedeieidi dalshetlyk lgkllddyll kkqknqakae sceiellnes gfsnssmqpc
       61 kgndqidevv divgssyppv aiekelthrn srccsssgss gesgfsssas tkgaaifsga
      121 drsvtekmye ygknlglsfq vvddildftq saeqlgkpas sdlakgnlta lviftlekep
      181 klrdiiesds arlvplkkqs n
//
LOCUS       XP_016673941             201 aa            linear   PLN 06-AUG-2024
DEFINITION  solanesyl diphosphate synthase 1, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016673941
VERSION     XP_016673941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818452.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..201
                     /product="solanesyl diphosphate synthase 1, chloroplastic
                     isoform X3"
                     /calculated_mol_wt=22207
     Region          11..74
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <89..189
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            143..151
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..201
                     /gene="LOC107893456"
                     /coded_by="XM_016818452.2:388..993"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mvkpepirhi mtdrekhnls tklesllgel penivdflke qsssdgqmge deieididal
       61 shetlyklgk llddyllkkq knqakaesce iellnesgfs nssmqpckas tkgaaifsga
      121 drsvtekmye ygknlglsfq vvddildftq saeqlgkpas sdlakgnlta lviftlekep
      181 klrdiiesds arlvplkkqs n
//
LOCUS       XP_040941523             201 aa            linear   PLN 06-AUG-2024
DEFINITION  solanesyl diphosphate synthase 1, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941523
VERSION     XP_040941523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085589.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..201
                     /product="solanesyl diphosphate synthase 1, chloroplastic
                     isoform X3"
                     /calculated_mol_wt=22207
     Region          11..74
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     Region          <89..189
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            143..151
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..201
                     /gene="LOC107893456"
                     /coded_by="XM_041085589.1:427..1032"
                     /db_xref="GeneID:107893456"
ORIGIN      
        1 mvkpepirhi mtdrekhnls tklesllgel penivdflke qsssdgqmge deieididal
       61 shetlyklgk llddyllkkq knqakaesce iellnesgfs nssmqpckas tkgaaifsga
      121 drsvtekmye ygknlglsfq vvddildftq saeqlgkpas sdlakgnlta lviftlekep
      181 klrdiiesds arlvplkkqs n
//
LOCUS       XP_016673933             565 aa            linear   PLN 06-AUG-2024
DEFINITION  synaptotagmin-4 [Gossypium hirsutum].
ACCESSION   XP_016673933
VERSION     XP_016673933.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818444.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673933.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..565
                     /product="synaptotagmin-4"
                     /calculated_mol_wt=63318
     Region          60..250
                     /region_name="SMP_SYT"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain found in the synaptotagmin family,
                     mostly plants; cd21677"
                     /db_xref="CDD:439233"
     Region          73..>558
                     /region_name="COG5038"
                     /note="Ca2+-dependent lipid-binding protein, contains C2
                     domain [General function prediction only]"
                     /db_xref="CDD:227371"
     Site            order(85,88..89,93,97,119,124,147,153,155,157,174,176,180,
                     182,197,199,201,211,236,239..240,243,245..248)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:439233"
     CDS             1..565
                     /gene="LOC107893453"
                     /coded_by="XM_016818444.2:225..1922"
                     /db_xref="GeneID:107893453"
ORIGIN      
        1 maflsamfig laigigliva faryekirss rrahmaktva sfarmtvqdt rtilppefyp
       61 pwvvfsqrqk lvwlnlqlkk iwpylneaas gsirasiept leqytpaiis sikfakftlg
      121 tvapqftgvs ivesesgagg itmelelkwd gnpkivlnin trlgvslpve mknigltgvf
      181 rlifkplvde fpcfgavays lrekkdfdfk lkvvgsevst ipgisdaiee tirdamedsi
      241 mwpvrkiipi lpgdysdlel kpvgtlevkl vqakdlankd migksdpfav vfvrplrdki
      301 ktsktinnql npiwnehyef ivedastqhl tvrifddegv qapeligcaq valkdlepdk
      361 vkdiwlklvk dlvvqkdtkn rgqvqlelly cpfgtessik npfdpdfslt slekalktat
      421 aekegdrims qrkrdvivrg vltvtviaae dlpavdflgk adpfvvltlk ksqriamtrv
      481 anetlnpvwd qtfdfvveda lhemiifevw dydtlkkeki grcimtltrv llegeiqdsf
      541 qldgaksgkl llhlkwvpql vfrga
//
LOCUS       XP_016673937             493 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium uptake protein, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016673937
VERSION     XP_016673937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818448.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..493
                     /product="calcium uptake protein, mitochondrial"
                     /calculated_mol_wt=56131
     Region          209..264
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(213,215,217,224,247,249,251,258)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          239..460
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cd15900"
                     /db_xref="CDD:320080"
     Region          239..267
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Site            order(247,249,251,258,441,443,445,452)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320080"
     Region          294..324
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          395..424
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          432..460
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     CDS             1..493
                     /gene="LOC107893455"
                     /coded_by="XM_016818448.2:146..1627"
                     /db_xref="GeneID:107893455"
ORIGIN      
        1 mptltslkrs slsmlhlsfi qqrlltcqfs slpltdasni dpnnkkgsfs rtfvkwvsgl
       61 avgsslgavy wwystsasdw gsaffkkpfl sfsewsmesd esttdgsktv fhklalpdys
      121 skfifgevyr rkvffnyekr lrlrsppekv feyfasfqtp egelfmrpad lmravvpvfp
      181 pseshlvrdg yltgerspge lrcdpsqffm lfdinsdgfi sfkeyiffvt llsipessfs
      241 vvfkmfdadn ngeidkeefk kvmalmrann rqgavqrdgl rfglkvsgsv edgglveyff
      301 gkdgkarlhh dkfvqfmrkl qdeilrlefd hydykgrgti sakdfalsmv aaadmshldr
      361 llervdalnd kpqlrevris ldefkhfael rrklqpfsla lfsygkvngl ltkddfkraa
      421 shvcgvsltd niveivfhvf dsnkdghlsw defvrvlrkr erdiaqpves gimglksccw
      481 ncsssgsigq vis
//
LOCUS       XP_016673931             220 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated membrane protein 711 [Gossypium hirsutum].
ACCESSION   XP_016673931
VERSION     XP_016673931.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818442.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673931.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..220
                     /product="vesicle-associated membrane protein 711"
                     /calculated_mol_wt=25038
     Region          4..118
                     /region_name="Longin"
                     /note="longin domain; cd14824"
                     /db_xref="CDD:341428"
     Site            order(4,25,28,48,51,53)
                     /site_type="lipid-binding"
                     /note="lipid binding site [chemical binding]"
                     /db_xref="CDD:341428"
     Site            order(14,17,19,26,30,109,113,116)
                     /site_type="other"
                     /note="Sec22 interface [polypeptide binding]"
                     /db_xref="CDD:341428"
     Site            order(47,50,70,74)
                     /site_type="other"
                     /note="VARP interface [polypeptide binding]"
                     /db_xref="CDD:341428"
     Region          123..211
                     /region_name="Synaptobrevin"
                     /note="pfam00957"
                     /db_xref="CDD:395764"
     CDS             1..220
                     /gene="LOC107893451"
                     /coded_by="XM_016818442.2:241..903"
                     /db_xref="GeneID:107893451"
ORIGIN      
        1 mailyalvar gsvmlaefta astnasaiar qildkipgdn dinvsysqdr yifhvkrtdg
       61 ltvlcmades agrripfafl edihqrfvrt ygraifsalp ygmndefsrv lnqqmeyyss
      121 dpnadrinrl kgemgqvrnv mienidkvle rgdrlellvd ktanmqgntf rfrkqtrrlr
      181 ntvwwrnvkl tgaliilili iiyvvlafvc hgitlptcik
//
LOCUS       XP_016673930             132 aa            linear   PLN 06-AUG-2024
DEFINITION  14 kDa proline-rich protein DC2.15 [Gossypium hirsutum].
ACCESSION   XP_016673930
VERSION     XP_016673930.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818441.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673930.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="14 kDa proline-rich protein DC2.15"
                     /calculated_mol_wt=13406
     Region          53..132
                     /region_name="HPS_like"
                     /note="Hydrophobic Protein from Soybean (HPS)-like
                     subfamily; composed of proteins with similarity to HPS, a
                     small hydrophobic protein with unknown function related to
                     cereal-type alpha-amylase inhibitors and lipid transfer
                     proteins. In addition to HPS, members...; cd01958"
                     /db_xref="CDD:238924"
     CDS             1..132
                     /gene="LOC107893450"
                     /coded_by="XM_016818441.2:477..875"
                     /db_xref="GeneID:107893450"
ORIGIN      
        1 masnktcavl tvfslllfnl sftnachsck ppkpipppaa cppppakpas cpkdtlklgv
       61 cadllglvni vvgtppsskc callqgladl eaalclctai kanvlganln ipitlsllls
      121 acqkeippgf kc
//
LOCUS       XP_016673929             375 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 [Gossypium hirsutum].
ACCESSION   XP_016673929
VERSION     XP_016673929.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818440.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..375
                     /product="glycosyltransferase BC10"
                     /calculated_mol_wt=42342
     Region          88..323
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..375
                     /gene="LOC107893449"
                     /coded_by="XM_016818440.2:157..1284"
                     /db_xref="GeneID:107893449"
ORIGIN      
        1 mlsptplslf calllclpla viititsptt tvhdgsghnl vpdldpppkt qqrfsskplp
       61 lplhdddslf rvasrvnskl ppgspkkiaf lfltisplpf aplwelyfnq tpkdlfnvyv
      121 hadpsylydp pfsgvfthrv ipskpalrft ptlasaarrl lahallhdrs nymfvllsas
      181 cipihsfdft yktltrskks fieilnnevg sydrwaargk dsmlpevtle dfrigsqfws
      241 ltrkhaklvv gdeviwakfn qpcvvwdtcy peenyfptli hmrdprgavp atlthvdwng
      301 sfdghprmyv eseigpqlis rlrkdepryg ddgtygsdsp atkqrrrfpf lfarkfspgs
      361 iqpllriand vvfkd
//
LOCUS       XP_040941524             435 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 6 [Gossypium hirsutum].
ACCESSION   XP_040941524
VERSION     XP_040941524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085590.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..435
                     /product="protein WVD2-like 6"
                     /calculated_mol_wt=46974
     Region          <69..407
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          206..285
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..435
                     /gene="LOC107893448"
                     /coded_by="XM_041085590.1:133..1440"
                     /db_xref="GeneID:107893448"
ORIGIN      
        1 mdsdtvsstg glevahqngv ypsgdaydsg vtdnvngtva esfetclyne mddngateqa
       61 regsnecves sglidskegg vkdnskqsep gkvqgktkne kpsvpkkvsp alvkkhkdgk
      121 itkatvpapn ggsvatnprm kqplksrsln erqanvskhs ekpdagnaek lklkplnkve
      181 gdtessspta adakvhkigt lpnygfsfkc deraekrkef ynkleekiha reveksnlqa
      241 ksketqeaei kmlrktlkfk atpmpsfyqe ptppkvelkk ipptrakspk fgrrksstps
      301 didgnsnnsh qsgrlsldek asqrisakvi spvhakksqr kslpklpsqk tslsgaknee
      361 qkskvsdqet ttkpkatska treestassy ltneesspiq qleafsgans ggsqpdldlg
      421 pvigdleqes iaveh
//
LOCUS       XP_016673924             639 aa            linear   PLN 06-AUG-2024
DEFINITION  EIN3-binding F-box protein 1 [Gossypium hirsutum].
ACCESSION   XP_016673924
VERSION     XP_016673924.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818435.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673924.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..639
                     /product="EIN3-binding F-box protein 1"
                     /calculated_mol_wt=68273
     Region          66..100
                     /region_name="F-box_AtTIR1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     transport inhibitor response 1 protein (TIR1),
                     coronatine-insensitive protein 1 (COI1) and similar
                     proteins; cd22159"
                     /db_xref="CDD:438930"
     Site            order(70,73,76..77,80..81,84..86,88..89,91..95,97..98)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438930"
     Region          159..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          188..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          213..386
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          214..239
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          240..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          266..345
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          293..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          318..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          346..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          372..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          425..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          436..605
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          452..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          478..515
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          505..531
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          532..554
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..582
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          583..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          609..632
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..639
                     /gene="LOC107893447"
                     /coded_by="XM_016818435.2:407..2326"
                     /db_xref="GeneID:107893447"
ORIGIN      
        1 msklfsfsgs dnffpggsiy pnpkesslff slghhvdvyf phhkrsrfsp pivfsgerve
       61 kknpsieilp declfeifrr lpggqerssc acvskrwltl lsnihrdein dnnkggvvsk
      121 vedqdvegdg ylsrvlegkk atnvrlaaia vgtasrgglg klsirgsnst cgvtnvglra
      181 isrgcpslrv lslwdsssvg dqglceiadg chqlekldlc hcpaitdksl lavakgcpnl
      241 kdltiegcan igneglqala rccpnlkais ikdcplirdq givsmlssas ftltkiklqa
      301 lnitdvslav ighygkavtd lslislpnvs ekgfwvmgng hglqklksfa vtscrgvtdl
      361 gleavgkgcp nlkqlclhkc aflsdkglvs faktassles lqleechrit qfgffgslln
      421 cgaklkafsl vncygikdln lglpsvlpck slrslsirnc pgfgdaslaa lgklcpqleh
      481 velsglhgis dagflpllet readlvkvnl sgcvnlsdka vcimadlhgw tlemlnlegc
      541 kisdaslvai akncqllsdl dvskcaitds giaalarsnq iklqilsmsg cskvsdksmp
      601 sllklgqtll glnlqqckai sssavdllve qlwrcdilf
//
LOCUS       XP_040941525             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941525
VERSION     XP_040941525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085591.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..164
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18372
     Region          <85..164
                     /region_name="DUF4050"
                     /note="Protein of unknown function (DUF4050); pfam13259"
                     /db_xref="CDD:463820"
     CDS             1..164
                     /gene="LOC107893445"
                     /coded_by="XM_041085591.1:224..718"
                     /db_xref="GeneID:107893445"
ORIGIN      
        1 mlssgylprw isalfasmgg clgcfqsskg lttqhwklkr ssfsedfwss saceienspl
       61 kpqrsissis isshsldlsg stsfpsefvn hglllwnqtr qqwvgnkkse kwtqpresml
      121 syscnwnavd dslhgstkpf pkplplselv dflddvweqe glyd
//
LOCUS       XP_040941526             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941526
VERSION     XP_040941526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085592.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..164
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18372
     Region          <85..164
                     /region_name="DUF4050"
                     /note="Protein of unknown function (DUF4050); pfam13259"
                     /db_xref="CDD:463820"
     CDS             1..164
                     /gene="LOC107893445"
                     /coded_by="XM_041085592.1:194..688"
                     /db_xref="GeneID:107893445"
ORIGIN      
        1 mlssgylprw isalfasmgg clgcfqsskg lttqhwklkr ssfsedfwss saceienspl
       61 kpqrsissis isshsldlsg stsfpsefvn hglllwnqtr qqwvgnkkse kwtqpresml
      121 syscnwnavd dslhgstkpf pkplplselv dflddvweqe glyd
//
LOCUS       XP_016673919             579 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 6.2 [Gossypium hirsutum].
ACCESSION   XP_016673919
VERSION     XP_016673919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818430.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..579
                     /product="protein NRT1/ PTR FAMILY 6.2"
                     /calculated_mol_wt=63930
     Region          28..554
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(41..42,45..46,49,82,157..158,160..162,165,191,
                     194..195,198,338,341..342,345..347,350,381,385,462..463,
                     467,471,487,490..491,494..495,498)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..579
                     /gene="LOC107893442"
                     /coded_by="XM_016818430.2:245..1984"
                     /db_xref="GeneID:107893442"
ORIGIN      
        1 mdekmsltva davdykghpa dksrtggwvp aalslgieic erlstmgiav nlvtylggtm
       61 hlpsatsanv vtdfmgtsfl lcllggflad sylgryrtia ifsmvqmlgt cllavstklp
      121 qlrpppckyt dvtqceqans fqmgilylsl ylialgtggl kssvsgfgtd qfdeknekek
      181 aqmayffnrf ffvistgtlm avtvlvyiqd evgrswgygi csasmfiall iffsgtkryr
      241 ykkcsgspiv hicqvvsaas gkktaklpsd isllyedlpe asrihhtdqf rfldkasvvt
      301 eddyrqgsfm mnpwklcpvt rveevkkmir llpiwattii fwttyaqmit fsveqattmd
      361 rtighfqipa gsltvffvga ilislavydr fiiplckkwr gepgftnlql igiglflsam
      421 gmaaaavvev krlsvakkyn etttlpitvf ylipqfflvg agegfiytgq ldffitqspk
      481 gmktmstglf lttlslgfff ssllvsivka ttgssdkqgw lgehinkgrl dcfygllaal
      541 sflnfglfll savwfrkktv kqapkmeivv kestieekc
//
LOCUS       XP_016673921             428 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 15 [Gossypium hirsutum].
ACCESSION   XP_016673921
VERSION     XP_016673921.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818432.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673921.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..428
                     /product="DEAD-box ATP-dependent RNA helicase 15"
                     /calculated_mol_wt=48312
     Region          46..253
                     /region_name="DEADc_DDX39"
                     /note="DEAD-box helicase domain of DEAD box protein 39;
                     cd17950"
                     /db_xref="CDD:350708"
     Site            order(49,67,69..71,74,93..99,198..199)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350708"
     Region          264..393
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(352,354,379,382..383)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     CDS             1..428
                     /gene="LOC107893444"
                     /coded_by="XM_016818432.2:197..1483"
                     /db_xref="GeneID:107893444"
ORIGIN      
        1 mgetrdnday eeelldyeee eekapdsvta kvngeagkkg yvgihssgfr dfllkpellr
       61 aivdsgfehp sevqhecipq ailgmdvicq aksgmgktav fvlsslqqie pspgqvialv
      121 lchtrelayq icheferfst ylpdikvavf yggvnikvhk dllknecphi vvgtpgrila
      181 ltrdkdlslk nvrhfildec dkmlesldmr rdvqeifkmt phdkqvmmfs atlskeirpv
      241 ckkfmqdpme iyvddeaklt lhglvqhyik lseleknrkl ndlldaldfn qvvifvksvs
      301 raaelnkllv ecnfpsicih sgmsqeerlt rykgfkeghk rilvatdlvg rgidiervni
      361 vinydmpdsa dtylhrvgra grfgtkglai tfvssasdsd vlnqvqerfe vdikelpeqi
      421 dtstymps
//
LOCUS       XP_016673920             399 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sugar phosphate/phosphate translocator At5g25400
            [Gossypium hirsutum].
ACCESSION   XP_016673920
VERSION     XP_016673920.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818431.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673920.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="probable sugar phosphate/phosphate translocator
                     At5g25400"
                     /calculated_mol_wt=44976
     Region          81..362
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; cl26744"
                     /db_xref="CDD:474852"
     CDS             1..399
                     /gene="LOC107893443"
                     /coded_by="XM_016818431.2:74..1273"
                     /db_xref="GeneID:107893443"
ORIGIN      
        1 mfspyihknq fyifislphf ptipsdpfll fflfihhfph lsifpktrkk qhhnttmgkg
       61 gslsdnvikn iilsytyvci wiflsftviv ynkyildkkl ynwpfpislt mihmsfcatl
      121 afllikvfkf vepvsmsrel ylssvvpiga lyslslwlsn sayiylsvsf iqmlkalmpv
      181 avysigvlfk ketfktdtmv nmisisfgva iaaygearfd swgvmlqlga vafeatrlvm
      241 iqilltskgi tlnpitslyy vapcclvfll vpwifveypv lkdtssfdfd fiifgtnsfc
      301 afalnlavfl lvgktsaltm nvagvvkdwl liafswsvik dtvtpinlfg ygvaflgvay
      361 ynhaklqalk akeaekkvgq adeegerlie erqgegsvk
//
LOCUS       XP_016675514             145 aa            linear   PLN 06-AUG-2024
DEFINITION  EG45-like domain containing protein [Gossypium hirsutum].
ACCESSION   XP_016675514
VERSION     XP_016675514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820025.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..145
                     /product="EG45-like domain containing protein"
                     /calculated_mol_wt=15552
     Region          39..142
                     /region_name="DPBB_EG45-like"
                     /note="double-psi beta-barrel fold of EG45-like
                     domain-containing proteins; cd22269"
                     /db_xref="CDD:439249"
     CDS             1..145
                     /gene="LOC107894816"
                     /coded_by="XM_016820025.2:300..737"
                     /db_xref="GeneID:107894816"
ORIGIN      
        1 mikvgkpkgq qvmrtssmsa tflvmycvll fdvvgvlgdv gtaasygppy lptrcggyse
       61 dqfppgelfa avsdglwdng ascgrkyrvr cisgpkrpck vrsivvqvvd lcshdpcpat
      121 lqlsnkafda iskidtkvnv eyari
//
LOCUS       XP_016673913             743 aa            linear   PLN 06-AUG-2024
DEFINITION  probable cyclic nucleotide-gated ion channel 5 [Gossypium
            hirsutum].
ACCESSION   XP_016673913
VERSION     XP_016673913.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818424.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673913.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..743
                     /product="probable cyclic nucleotide-gated ion channel 5"
                     /calculated_mol_wt=84672
     Region          156..>581
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          510..641
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(580..581,599..601)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(628..630,634..636)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..743
                     /gene="LOC107893439"
                     /coded_by="XM_016818424.2:214..2445"
                     /db_xref="GeneID:107893439"
ORIGIN      
        1 mfdcghkaqy msgqrekfvr lddldsrsss psaaglkncg fnieglgrsg hannrtsrsf
       61 krgirkgseg lksigrslgf gvsrvvfped lkvsekkifd pqdkflllcn klffvscila
      121 vsvdplfffl pvindpekcl tidkslavta ttlrtiidaf ylirmalqfr tayiapssrv
      181 fgrgelvidp ariakrymlq yffldflavl plpqivvwrf lhgsngsdvl atkqalffiv
      241 lfqyiprflr vipltsemkr ttgvfaetaw agaayylvly mlcshivgaf wywvavernd
      301 tcwqkackdi grdkcntnfl ycgnqhmegy gvwnntkdtv lkekcpaddn innppfdfgi
      361 fthalssgiv sstkffskyc yclwwglqnl stlgqglets typgevifsi alaifglilf
      421 allignmqty lqsltirlee mrikrrdseq wmhhrmlpqd lrervrrydq ykwletrgvd
      481 eenlvqslpk dlrrdikrhl clalvrrvpl fesmderlld aicerlkpcl ftestyivre
      541 gdpvdemlfi irgrlesvtt dggrsgffnr sllkegdfcg eelltwaldp ktgaslptst
      601 rtvmalteve afaliaeelk fvagqfrrlh srqvqhtfrf hsqqwrtwaa cfiqaawrry
      661 skrkimeelr rkeeeeeaaa ggsdgtrnns gggsysigat flaskfaana lrgihrnrna
      721 ksakelvklq kpsepdftae dad
//
LOCUS       XP_016673910             522 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine aminopeptidase 1 [Gossypium hirsutum].
ACCESSION   XP_016673910
VERSION     XP_016673910.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818421.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673910.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..522
                     /product="leucine aminopeptidase 1"
                     /calculated_mol_wt=54390
     Region          20..518
                     /region_name="PRK00913"
                     /note="multifunctional aminopeptidase A; Provisional"
                     /db_xref="CDD:234863"
     CDS             1..522
                     /gene="LOC107893437"
                     /coded_by="XM_016818421.2:383..1951"
                     /db_xref="GeneID:107893437"
ORIGIN      
        1 mahtlgltqp anielpkisf aakeidvaew kgdllavgvt ekdmtkdens kfqnpilkkl
       61 dgllgsllae asfeedftgk agqslvhrlp glgskrvglf glgqsasspa afhglgeava
      121 aaaktaqass aavilassec psvmskgnta aaivsgtvlg lyednrykse skkpqlksld
      181 ilglgtgpei ekkikyaevv scaiifgrel vnspanvltp aalaaeaski aslysdvlsa
      241 nilteeqcre lkmgsylgva aasanpphfi hlcykppsgp vktklalvgk gltfdsggyn
      301 iktgpgssie tmkvdmggsa avfgaakalg qikpsgvevh fivascenmi sgkgmrpgdi
      361 vtasngktie vnntdaegrl tladalvyac nqgvekivdl atltgacvva lgpsiagvft
      421 pdddlakelf qaseasgekl wrmpleesyw esmksgvadm vntggrqgga inaalflkqf
      481 vdekvkwmhi dmagpvlndk khvatgfgis tlvewvlkns ss
//
LOCUS       XP_016673911             522 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine aminopeptidase 1 [Gossypium hirsutum].
ACCESSION   XP_016673911
VERSION     XP_016673911.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818422.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673911.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..522
                     /product="leucine aminopeptidase 1"
                     /calculated_mol_wt=54390
     Region          20..518
                     /region_name="PRK00913"
                     /note="multifunctional aminopeptidase A; Provisional"
                     /db_xref="CDD:234863"
     CDS             1..522
                     /gene="LOC107893437"
                     /coded_by="XM_016818422.2:281..1849"
                     /db_xref="GeneID:107893437"
ORIGIN      
        1 mahtlgltqp anielpkisf aakeidvaew kgdllavgvt ekdmtkdens kfqnpilkkl
       61 dgllgsllae asfeedftgk agqslvhrlp glgskrvglf glgqsasspa afhglgeava
      121 aaaktaqass aavilassec psvmskgnta aaivsgtvlg lyednrykse skkpqlksld
      181 ilglgtgpei ekkikyaevv scaiifgrel vnspanvltp aalaaeaski aslysdvlsa
      241 nilteeqcre lkmgsylgva aasanpphfi hlcykppsgp vktklalvgk gltfdsggyn
      301 iktgpgssie tmkvdmggsa avfgaakalg qikpsgvevh fivascenmi sgkgmrpgdi
      361 vtasngktie vnntdaegrl tladalvyac nqgvekivdl atltgacvva lgpsiagvft
      421 pdddlakelf qaseasgekl wrmpleesyw esmksgvadm vntggrqgga inaalflkqf
      481 vdekvkwmhi dmagpvlndk khvatgfgis tlvewvlkns ss
//
LOCUS       XP_016673917             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673917
VERSION     XP_016673917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818428.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15081
     CDS             1..135
                     /gene="LOC107893440"
                     /coded_by="XM_016818428.2:76..483"
                     /db_xref="GeneID:107893440"
ORIGIN      
        1 mkrrvvkwll fffvvvvics nnslvhssse avpfissskv sghhyvnplm egkqlnknvl
       61 krhgrmlktl hneeinared ageeskkgkg tygggdllrp rarksgansl llkssplmlr
      121 yllligfhla tifff
//
LOCUS       XP_016673918              76 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0057 membrane protein At4g30660 [Gossypium hirsutum].
ACCESSION   XP_016673918
VERSION     XP_016673918.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818429.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673918.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..76
                     /product="UPF0057 membrane protein At4g30660"
                     /calculated_mol_wt=8571
     Region          <21..56
                     /region_name="Pmp3"
                     /note="Proteolipid membrane potential modulator;
                     pfam01679"
                     /db_xref="CDD:460290"
     CDS             1..76
                     /gene="LOC107893441"
                     /coded_by="XM_016818429.2:163..393"
                     /db_xref="GeneID:107893441"
ORIGIN      
        1 mpsrceicce lliaillppl gvclrhgcct aefciclvlt ilgyipgiiy alyaivyvdr
       61 deyfdeyrrp lyysna
//
LOCUS       XP_016673908             774 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At2g24230 [Gossypium hirsutum].
ACCESSION   XP_016673908
VERSION     XP_016673908.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818419.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673908.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..774
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At2g24230"
                     /calculated_mol_wt=85629
     Region          <68..773
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          95..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          190..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..340
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          492..768
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(492..495,498,500,512,514,543,559..562,617,621..622,
                     624,634..635)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..774
                     /gene="LOC107893434"
                     /coded_by="XM_016818419.2:510..2834"
                     /db_xref="GeneID:107893434"
ORIGIN      
        1 maemgfgffd cllilsllfk hvtcqlpntd yfyvsdflkk mgsnsymshn nsipvftwkg
       61 vqcdakgenv iglkasglgl tglipdstig kltklrfldl snnritalps dlwslgslkr
      121 lnlscnkitg slsnnignfg rlqvvdlsdn dfsgeipeti sslvslqtlk lagngfegsi
      181 ptgilrcwsl vsldlssnrl ngtlpdglta afpklkylnl arneiygnlf qgdihqvnfn
      241 wshlvyldls enrlsgeifv nlsqalnlrh lnlaynrfar qkvprigmls sleslnlskt
      301 slvghipsei selsylhtid vssnnlsgei pvpvlqklpl mkrfnfsynn ltlcasgfsl
      361 dtfetafygs lnscpiaanp vlfkrrahih kvftlnlala ltlamvclla gllflafncr
      421 kksrtwlvkq psykeeqnms gpfsfqtdst twvadvkhat svpvmmfekp llnitfadll
      481 satsnfsist lvsegkfgpv yrgflpggiy vavkilvhgs tltdhevare leylgrikhp
      541 nlvpligycl agdqriaiyd hmengnlqdl lhdtreedse glstlttwtf rhkialgiar
      601 alaflhhgcs pplvhkdvka ssvyldlnle prlsdfglak lfgtsledde isgrspayvp
      661 pefsqlesdd tptpksdvyc fgvvlfelit gkkqirddyp eeqeanlvsw vrglvrknqg
      721 skaidpkird tgavyqmeea lkiaylctae lptkrpsmqq ivgllkdiep tasq
//
LOCUS       XP_016673909             381 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673909
VERSION     XP_016673909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818420.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..381
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41814
     Region          157..335
                     /region_name="Adenine_glyco"
                     /note="Methyladenine glycosylase; pfam03352"
                     /db_xref="CDD:460894"
     CDS             1..381
                     /gene="LOC107893435"
                     /coded_by="XM_016818420.2:698..1843"
                     /db_xref="GeneID:107893435"
ORIGIN      
        1 mlgaprlrsm napdsearpv lgpagnkags lsarkpaskp lrkvekspae vtateekksl
       61 pssivsslsp kkhsvsvpsv lrrhekllhs nlslnascss dastdsfhsr astgrlirsn
      121 svgsrrkpya skprsfvsds gsdspsdgsh qkkrcawvtp ntdpsyatfh deewgvpvhd
      181 dkklfellvl sgalseltwp ailskrqmfr evfmdfdpaa vsklnekkli apgsvsssll
      241 selklraiie narqiskvid efgsfdeyiw sfvnhkpiis kfryprqvpv ktpkadvisk
      301 dlvrrgfrsv gptviysfmq vagitndhlt gcfrfqectt aaegkeveik eraevkkpdn
      361 svsviksels iaidelsfsc e
//
LOCUS       XP_016673906             445 aa            linear   PLN 06-AUG-2024
DEFINITION  omega-6 fatty acid desaturase, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673906
VERSION     XP_016673906.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818417.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..445
                     /product="omega-6 fatty acid desaturase, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=51455
     Region          1..445
                     /region_name="PLN02598"
                     /note="omega-6 fatty acid desaturase"
                     /db_xref="CDD:215323"
     Site            order(169,173,205,208..209,365,368..369)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239584"
     CDS             1..445
                     /gene="LOC107893433"
                     /coded_by="XM_016818417.2:491..1828"
                     /db_xref="GeneID:107893433"
ORIGIN      
        1 mackisnsmf iclgpsqrpi rsqtiaihss tasichlkwd nllvkginhr kgiiplrrnk
       61 viqavavpvr pssadsadsa eyrkqlaety gfrqigeplp dnvtlkdvid tlprkvfeid
      121 dvkawtsvli svtsyalgif miskapwyll plawawtgta itgffvighd cahksfsknk
      181 lledivgtla flpliypyep wrfkhdrhha ktnmlsedta whpvwekefe tspflrkaim
      241 fgygpfrpwm siahwliwhf dlnkfrpnev krvkislacv fafmaigwpl iiyktgimgw
      301 ikfwlmpwlg yhfwmstftm vhhtaphipf khsdewnaaq aqlngtvhcd yprwievlch
      361 dinvhiphhv ssripsynlr aahksiqenw gpylneatwn wrlmktimtv chvydkeqny
      421 igfdelapne aspitflkrv mpdya
//
LOCUS       XP_016673907             442 aa            linear   PLN 06-AUG-2024
DEFINITION  omega-6 fatty acid desaturase, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673907
VERSION     XP_016673907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818418.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..442
                     /product="omega-6 fatty acid desaturase, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=51080
     Region          1..442
                     /region_name="PLN02598"
                     /note="omega-6 fatty acid desaturase"
                     /db_xref="CDD:215323"
     Site            order(166,170,202,205..206,362,365..366)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239584"
     CDS             1..442
                     /gene="LOC107893433"
                     /coded_by="XM_016818418.2:432..1760"
                     /db_xref="GeneID:107893433"
ORIGIN      
        1 mackisnsmf iclgpsqrpi rsqtiaihss tasichlkwd nllvkginhr kgiiplrrnk
       61 viqavavpvr pssadsadsa eyrkqlaety gfrqigeplp dnvtlkdvid tlprkiddvk
      121 awtsvlisvt syalgifmis kapwyllpla wawtgtaitg ffvighdcah ksfsknklle
      181 divgtlaflp liypyepwrf khdrhhaktn mlsedtawhp vwekefetsp flrkaimfgy
      241 gpfrpwmsia hwliwhfdln kfrpnevkrv kislacvfaf maigwpliiy ktgimgwikf
      301 wlmpwlgyhf wmstftmvhh taphipfkhs dewnaaqaql ngtvhcdypr wievlchdin
      361 vhiphhvssr ipsynlraah ksiqenwgpy lneatwnwrl mktimtvchv ydkeqnyigf
      421 delapneasp itflkrvmpd ya
//
LOCUS       XP_016673903            1180 aa            linear   PLN 06-AUG-2024
DEFINITION  formin-like protein 13 [Gossypium hirsutum].
ACCESSION   XP_016673903
VERSION     XP_016673903.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818414.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673903.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1180
                     /product="formin-like protein 13"
                     /calculated_mol_wt=129228
     Region          16..189
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          197..336
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     Region          <390..>628
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          771..1137
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1180
                     /gene="LOC107893432"
                     /coded_by="XM_016818414.2:640..4182"
                     /db_xref="GeneID:107893432"
ORIGIN      
        1 mglfrklfyk kppdglleic ervhvfdccf tidaweeeny tvhvngivnn lhghfpdasf
       61 lvfnfreges ksymaellse ydmtimdypc qyegcpliam evlhhflrsc eswlsldqnn
      121 lllmhcergg wpvlafmlaa lliyrkqysg eqktldmiyk qapserlqll sslnpvpsql
      181 rylqyvsrrn vaaawppldr altldcvilr qipnvdgegg crpvfriygq dpflvadkvp
      241 kllystpkrs kyvryykqke calvkidinc hvqgdivvec inlsekerek mifrvvfnsa
      301 firsnilmln rdeidvlwda kdqfakefra eilfsemdaa asitsmdnfc feekeglpie
      361 afakvqemfs nvdwldprsd aaynilqqmg asaqeksdse rnssvdsprf grlsprklsd
      421 ekklsslpgs prspttmglk tlvsapseks sldseareea epqdsqiaps sqpdapqsae
      481 iaknqpsevs tsmsspasaa tstvtaplal agkedqvipt aksplsktsp akedpevrvi
      541 spatsppptp hvqenqtisd ipteasasle eslaqrattp aartpspasp lsktevgkdg
      601 ppavpppapv iaespvatps ppqvspfked vastaappph pspplhskqe aspaasslvp
      661 ptpppppptp tdvssanpaa pplspspsps tgsssapppp ppppttgsss appppppplt
      721 tgsssapppp papfgkktgg gpsapapppl lssansknkl lsrsgnsknd kklkplhwlk
      781 lsravqgslw aeaqktgeas ktpeidisel enlfsaaapn tdrgnkqgsr takgpkteiv
      841 qlidhrrayn ceimlskvkv plpelmssvl tleesaldvd qvdnlikfcp tkeemellkg
      901 ytgdkdklgk ceqfflelmk vprvesklrv fsfkiqfrsq vsdlrhslni vnstaeeirn
      961 svklkrimqt ilslgnalnq gtargsaigf kldsllkltd trarnnkmtl mhylckvlad
     1021 klpvvldfsk dvsslepaak iqlkflaeem qaiskglekv vqelsssend gpvsdsfrek
     1081 lkeflcfaea evrslaslys gvgrnvdali lyfgedparc sfeqvtstll nfvrmfnkah
     1141 denckqleqe mkksaendks kmqdesknil qtsiksnnvk
//
LOCUS       XP_016673901             580 aa            linear   PLN 06-AUG-2024
DEFINITION  reticulon-like protein B21 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673901
VERSION     XP_016673901.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818412.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673901.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..580
                     /product="reticulon-like protein B21 isoform X1"
                     /calculated_mol_wt=65228
     Region          351..504
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..580
                     /gene="LOC107893431"
                     /coded_by="XM_016818412.2:323..2065"
                     /db_xref="GeneID:107893431"
ORIGIN      
        1 mdlsyrrlgv kssvvaagsv wetrmksdef rggikvfnge dedeeeenin gddgdkrlkk
       61 gqtvggskrk twknesfdgl kknpikvvak grsmehckdl slavvdngik kkspvqvkkg
      121 rsdgnernpi ltrkqrsqvh krtaktdsng nedlgldsie eneknpvktd kveseteenn
      181 eehgvcqvkt isssadngdt vksspeplld dddahsdgdg aeddeeqiee engievenek
      241 ksfdikemnv qedkklpkid tqvkkspeek pnkainemkk vhedkgsnvv nqvkkfsqfh
      301 nktatfsstm nkqpppvvkl atsiptkskp ssnddhhyhk fpqtqnklqn ivdlvmwrdi
      361 pksalifgig tfiiisssyt qdlnisfisv isymglvyls aiflyrsiic rgvveidesn
      421 cvvgeeeaiw llklvlpyln efllklralf sgdpsttmkm avllfvlarc gssitiwkma
      481 klgffgvfiv pklctsyshq ltaygkfwig rfrdawesct hkkavamvlf tlvwnlcstl
      541 ariwaafmlf valryyqqkm tdewmereeg lcgsgssvei
//
LOCUS       XP_016673902             577 aa            linear   PLN 06-AUG-2024
DEFINITION  reticulon-like protein B21 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673902
VERSION     XP_016673902.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818413.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673902.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..577
                     /product="reticulon-like protein B21 isoform X2"
                     /calculated_mol_wt=64901
     Region          350..501
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..577
                     /gene="LOC107893431"
                     /coded_by="XM_016818413.2:323..2056"
                     /db_xref="GeneID:107893431"
ORIGIN      
        1 mdlsyrrlgv kssvvaagsv wetrmksdef rggikvfnge dedeeeenin gddgdkrlkk
       61 gqtvggskrk twknesfdgl kknpikvvak grsmehckdl slavvdngik kkspvqvkkg
      121 rsdgnernpi ltrkqrsqvh krtaktdsng nedlgldsie eneknpvktd kveseteenn
      181 eehgvcqvkt isssadngdt vksspeplld dddahsdgdg aeddeeqiee engievenek
      241 ksfdikemnv qedkklpkid tqvkkspeek pnkainemkk vhedkgsnvv nqvkkfsqfh
      301 nktatfsstm nkqpppvvkl atsiptkskp ssnddhhyhk fpqtqnklqn ivmwrdipks
      361 alifgigtfi iisssytqdl nisfisvisy mglvylsaif lyrsiicrgv veidesncvv
      421 geeeaiwllk lvlpylnefl lklralfsgd psttmkmavl lfvlarcgss itiwkmaklg
      481 ffgvfivpkl ctsyshqlta ygkfwigrfr dawescthkk avamvlftlv wnlcstlari
      541 waafmlfval ryyqqkmtde wmereeglcg sgssvei
//
LOCUS       XP_016673900             434 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 6 [Gossypium
            hirsutum].
ACCESSION   XP_016673900
VERSION     XP_016673900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818411.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..434
                     /product="CBL-interacting serine/threonine-protein kinase
                     6"
                     /calculated_mol_wt=48894
     Region          19..273
                     /region_name="STKc_SnRK3"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     3; cd14663"
                     /db_xref="CDD:271133"
     Site            order(26..30,34,47,49,81,97..100,104,106..107,109,
                     141..142,144,146..147,149,159..160,163,180..184,186,
                     216..219)
                     /site_type="active"
                     /db_xref="CDD:271133"
     Site            order(26..29,34,47,49,81,97..100,104,146..147,149,
                     159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271133"
     Site            order(104,106..107,109,142,144,146,163,180..184,186,
                     216..219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271133"
     Site            order(159..170,177..184)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271133"
     Region          306..420
                     /region_name="CIPK_C"
                     /note="C-terminal regulatory domain of Calcineurin B-Like
                     (CBL)-interacting protein kinases; cd12195"
                     /db_xref="CDD:213380"
     Site            order(306..314,317..323,329..332,334..336,338,388,392,398)
                     /site_type="other"
                     /note="CBL interaction site [polypeptide binding]"
                     /db_xref="CDD:213380"
     Site            334..335
                     /site_type="other"
                     /note="putative PP2C binding site [polypeptide binding]"
                     /db_xref="CDD:213380"
     CDS             1..434
                     /gene="LOC107893430"
                     /coded_by="XM_016818411.2:523..1827"
                     /db_xref="GeneID:107893430"
ORIGIN      
        1 mkkmaekgkt dhpallhgky elgrmlghgt fakvyharhv ttgksvamkv vgkekvirvg
       61 mmeqiqreis vmnmvkhpni velhevmask skiyfamelv rggelfskvv qgrlkedlar
      121 vyfqqlisav dfchsrgvyh rdlkpenlll dedgnlkvtd fglsafsehl kqdgllyttc
      181 gtpayvapev iakkgydgsk adiwscgvil yvllagflpf qddnlvamyr kiyrgdfkcp
      241 pwfssearrl itklldpnps sritiskird sswfkksipk tvrtkeelef eafngdnkss
      301 kpetlnafhi islsqgfdls plfeekkree eelrfattrp assvisrlee vaksvkfnvk
      361 kseskvrlqg qecgrkgkla iaadifavtp sflvvevkkd ngdtfeynqf cskqlrpalq
      421 divwtspaek ptva
//
LOCUS       XP_016673899             138 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S12-2 [Gossypium hirsutum].
ACCESSION   XP_016673899
VERSION     XP_016673899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818410.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..138
                     /product="40S ribosomal protein S12-2"
                     /calculated_mol_wt=14525
     Region          25..120
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     pfam01248"
                     /db_xref="CDD:426153"
     CDS             1..138
                     /gene="LOC107893427"
                     /coded_by="XM_016818410.2:195..611"
                     /db_xref="GeneID:107893427"
ORIGIN      
        1 msgeevavap tevaaaigep mdinaalplv irkskahggl arglheaaka iekhnahlcv
       61 laddcdqpdy vklvkalcad hnvkvlraps aktlgewagl ckidsegkar kvvgcscvvv
      121 kdygeqheav evvqqhkd
//
LOCUS       XP_016673898             343 aa            linear   PLN 06-AUG-2024
DEFINITION  replication termination factor 2 [Gossypium hirsutum].
ACCESSION   XP_016673898
VERSION     XP_016673898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818409.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..343
                     /product="replication termination factor 2"
                     /calculated_mol_wt=37738
     Region          89..328
                     /region_name="Rtf2"
                     /note="Rtf2 RING-finger; pfam04641"
                     /db_xref="CDD:398360"
     CDS             1..343
                     /gene="LOC107893426"
                     /coded_by="XM_016818409.2:168..1199"
                     /db_xref="GeneID:107893426"
ORIGIN      
        1 mklqfflrsp shqtltvtle stqsltlrql kssllpnpqs fssfyftlng kplsdstllp
       61 npqishlstl fllprvsggg gdggatgaes rdcylkmyav kkpdkvdpne krlgkwlnca
      121 lsneplrepc vidklgnifn kealveallg kklpkefrhv kglkdminvk lsmipgkqsd
      181 aadgatfqcp itglefngky kffalrncgh vvsakalkev kssaclvchk efvesdkmvi
      241 ngseeevaal rermeeeksk ivkekkkrgi dvvdgkkdcg kvegneklen gkksnnggvk
      301 kfratdvapa natkevyasi ftsskkldfk etftcrslpl grn
//
LOCUS       XP_016673897             194 aa            linear   PLN 06-AUG-2024
DEFINITION  trafficking protein particle complex subunit 5 [Gossypium
            hirsutum].
ACCESSION   XP_016673897
VERSION     XP_016673897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818408.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..194
                     /product="trafficking protein particle complex subunit 5"
                     /calculated_mol_wt=21519
     Region          25..182
                     /region_name="TRAPPC5_Trs31"
                     /note="Trs31 subunit of the TRAPP complex; cd14943"
                     /db_xref="CDD:271346"
     Site            order(25..30,32..33,35..36,40,54,58,62,65..66,69,96..97,
                     99..100,143)
                     /site_type="other"
                     /note="BET3 interface [polypeptide binding]"
                     /db_xref="CDD:271346"
     Site            order(65,67..68,71,77..81,154,157)
                     /site_type="other"
                     /note="sedlin interface [polypeptide binding]"
                     /db_xref="CDD:271346"
     CDS             1..194
                     /gene="LOC107893425"
                     /coded_by="XM_016818408.2:223..807"
                     /db_xref="GeneID:107893425"
ORIGIN      
        1 migtgkikqy anvldkplgk gkqevslsaf aflfselvqy nqtqvdnise letrledagy
       61 avgarvlell chrdkgnrre trllgilsfv hstvwkvlfg kvadslekgt ehedeymise
      121 kellvnrfis ipkdmgtfhc gafvagivkg vlenagfpav vtahfvpveg qqrprttili
      181 kfaeevlrre arlg
//
LOCUS       XP_016673896            1339 aa            linear   PLN 06-AUG-2024
DEFINITION  FIP1[V]-like protein isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673896
VERSION     XP_016673896.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818407.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673896.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1339
                     /product="FIP1[V]-like protein isoform X1"
                     /calculated_mol_wt=150201
     Region          361..403
                     /region_name="Fip1"
                     /note="Fip1 motif; pfam05182"
                     /db_xref="CDD:461573"
     Region          <849..1335
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1339
                     /gene="LOC107893424"
                     /coded_by="XM_016818407.2:143..4162"
                     /db_xref="GeneID:107893424"
ORIGIN      
        1 medddefgdl ytdvlgpfss tstttslssl apqpfqpspt ptqllrpidl nlqsqhdgnt
       61 lfgapaaqtl apfksppspp avpaeaeapd sipsslgsvs epmvldskhe sadgkelefd
      121 ieegggngve digsndplip gltevvrqeg nnigirgsqa eadgerddwd sdseddlqiv
      181 lndnnhgpva metgemiged ddddedgdpl viladgdanq gtaeqewgee rgqaadgekk
      241 eggeagkvts ggvlapkigy sshlyhpfhs qfkyvrpgat pmpgataggs ggapgqvspi
      301 mgamagrgrg dwrpsgmkag ppmqkgfhps fgapgwgnnt agrgfgggle ftlpshktif
      361 dvdidsfeek pwkypgvdls dffnfglnee swkdyckqle qhrlettmqs kirvyesgrt
      421 eqgydpdlpp elaaataqvv paaanlvksd ggqndmtkga grvrpplptg rpiqveggsg
      481 erlpsidtrp prvrdsdavi eivcedtldd dsstgngveg raendlpmed lrgdlaseaa
      541 iaheeteyfd dsadacksrk kelvgrtvnf ahdnvrevng vlpfpveasr pygpgprvqs
      601 pmgpsensgs ppderhqqgr irrkspcitp ihgerdnfnd tdreesverm dgksprvvrd
      661 pressvehkd hvddelepad gspvtekdel ingthkdehs lnpmrnekis sqaeqwklce
      721 rdddedsraa rssenskars gssrdyqkwr dgaeeevvqg erssrigivk khldendqnf
      781 rrkdrdgrle ierncmvgkp gedsyplrdv daslshnlpv kkegfgrrre sdnpdgtwqw
      841 reddpygrke rtedlrkrdh dnemgsrnra kvresersdk ddypsrkqld ngnykdvsar
      901 hrerddnlks ryeaaddyps krrkdeeylr rdhtnkeeil qgrressgsr rkrerdeild
      961 prkrderrrt renfdehhsa rhkdevwlnr ekverlrerd ewhrikqshd gslskreree
     1021 grgtvrsgrg sedkacgght rgkdeykvse keyqlketvr hseqvkrrdr nddesssrhr
     1081 gredlyargh qfsnderksr persstrsdh gvdasdsqkg hekkhkentr knreseggnq
     1141 ttlgsakksr edlsghnnet glksdeknpv hynssrkhke dassedelre skrgrskler
     1201 wtshterdyn inskssaslk fkeiekinnv vssesnkfpd gpgksvepve hfpplsdnkg
     1261 fsepeikead trpsedqhld tveklkkrse rfklpisrek dtlatktene alpstenetp
     1321 vdseikherp arkrrwisn
//
LOCUS       XP_040941528            1160 aa            linear   PLN 06-AUG-2024
DEFINITION  FIP1[V]-like protein isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941528
VERSION     XP_040941528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085594.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1160
                     /product="FIP1[V]-like protein isoform X2"
                     /calculated_mol_wt=129565
     Region          361..403
                     /region_name="Fip1"
                     /note="Fip1 motif; pfam05182"
                     /db_xref="CDD:461573"
     Region          <634..>1153
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1160
                     /gene="LOC107893424"
                     /coded_by="XM_041085594.1:143..3625"
                     /db_xref="GeneID:107893424"
ORIGIN      
        1 medddefgdl ytdvlgpfss tstttslssl apqpfqpspt ptqllrpidl nlqsqhdgnt
       61 lfgapaaqtl apfksppspp avpaeaeapd sipsslgsvs epmvldskhe sadgkelefd
      121 ieegggngve digsndplip gltevvrqeg nnigirgsqa eadgerddwd sdseddlqiv
      181 lndnnhgpva metgemiged ddddedgdpl viladgdanq gtaeqewgee rgqaadgekk
      241 eggeagkvts ggvlapkigy sshlyhpfhs qfkyvrpgat pmpgataggs ggapgqvspi
      301 mgamagrgrg dwrpsgmkag ppmqkgfhps fgapgwgnnt agrgfgggle ftlpshktif
      361 dvdidsfeek pwkypgvdls dffnfglnee swkdyckqle qhrlettmqs kirvyesgrt
      421 eqgydpdlpp elaaataqvv paaanlvksd ggqndmtkga grvrpplptg rpiqveggsg
      481 erlpsidtrp prvrdsdavi eivcedtldd dsstgngveg raendlpmed lrgdlaseaa
      541 iaheeteyfd dsadacksrk kelvgrtvnf ahdnvrevng vlpfpveasr pygpgprvqs
      601 pmgpsensgs ppderhqqgr irrkspcitp ihgerdnfnd tdreesverm dgksprvvrd
      661 pressvehkd hvddelepad gspvtekdel ingthkdehs lnpmrnekis sqaeqwklce
      721 rdddedsraa rssenskars gssrdyqkwr dgaeeevvqg erssrigivk khldendqnf
      781 rrkdrdgrle ierncmvgkp gedsyplrdv daslshnlpv kkegfgrrre sdnpdgtwqw
      841 reddpygrke rtedlrkrdh dnemgsrnra kvresersdk ddypsrkqld ngnykdvsar
      901 hrerddnlks ryeaaddyps krrkdeeylr rdhtnkeeil qgrressgsr rkrerdeild
      961 prkrderrrt renfdehhsa rhkdevwlnr ekverlrerd ewhrikqshd gslskreree
     1021 grgtvrsgrg sedkacgght rgkdeykvse keyqlketvr hseqvkrrdr nddesssrhr
     1081 gredlyargh qfsnderksr persstrsdh gvdasdsqkg hekkhkentr knreseggnq
     1141 ttlgsakksr edlsghnnet
//
LOCUS       XP_040941529             765 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At5g37450 [Gossypium hirsutum].
ACCESSION   XP_040941529
VERSION     XP_040941529.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085595.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..765
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At5g37450"
                     /calculated_mol_wt=85789
     Region          27..358
                     /region_name="GH18_plant_chitinase_class_V"
                     /note="The class V plant chitinases have a glycosyl
                     hydrolase family 18 (GH18) domain, but lack the
                     chitin-binding domain present in other GH18 enzymes. The
                     GH18 domain of the class V chitinases has endochitinase
                     activity in some cases and no catalytic...; cd02879"
                     /db_xref="CDD:119358"
     Site            order(33,57,137,139,141,206..207,256,347)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:119358"
     Region          455..722
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(455..458,461,463,475,477,506,522..525,574,578..579,
                     581,591..592)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..765
                     /gene="LOC107893423"
                     /coded_by="XM_041085595.1:39..2336"
                     /db_xref="GeneID:107893423"
ORIGIN      
        1 masnkpifff llllflslkl qssssqtwik agywtsissl pvsdinsalf thlfasfafi
       61 nktsyqlfin ssdeqsfsnf tsivklknps ittilsiwvt rsesttfsli vnetsrrksf
      121 iessvktarl ygfhgldlyg feptngtslg tfldewraev asesrntgnt rllltmsarr
      181 lpivnsvsyp iesakrnldw inivaydyqv pkvdrftgfh aplfdplgra ntdddirewl
      241 krgfpadklv lglpyhgygw klvnsadngi gsaalgpalt idgsmgykli ksfiqnygyg
      301 veavynstyv vsfckigsnw infddveaik akvsyakvkg llgytafqls nddnwvlsqa
      361 aygvgttqpk khqllvivlv tvaamvllim aliyypqhkv fksqgllgal kisvslirtk
      421 isgkrkheng dpnlqaftfa tikaatnnfs nenklgeggy gpvykgelsn gqeiavkrls
      481 rssnqgleef kneinltakl qhvnlvrvlg icteneekml vyefmlnksl dfylydpfkr
      541 hmldwrkris iiegvtqgll ylqeysnyti ihrdikasni lldsemnpki sdfgmakffk
      601 kdeleantnr ivgtygyvpp eyvkkgiyst kydvysfgvl llqiisgkrn sslygchenl
      661 nlleyayelw klgrgaeffd aslddssssc klitcmqlal lcvqenpadr psmvevftil
      721 knkssvaisv pkqpaysttr derkdigrkk vfsvngasit qvepr
//
LOCUS       XP_016673892             223 aa            linear   PLN 06-AUG-2024
DEFINITION  class V chitinase CHIT5 [Gossypium hirsutum].
ACCESSION   XP_016673892
VERSION     XP_016673892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818403.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="class V chitinase CHIT5"
                     /calculated_mol_wt=24852
     Region          <1..212
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     CDS             1..223
                     /gene="LOC107893421"
                     /coded_by="XM_016818403.2:714..1385"
                     /db_xref="GeneID:107893421"
ORIGIN      
        1 msnleaffke wreaveseds asskppllls aavyfassff ldlprtyptd aiarcldfvn
       61 pmcfdyhgsw dtsvtgehal lydktsnist sygipswiea gvppkklvmg ipfygkswel
      121 khpknhgiga pangvgpgnn gimlysdivk yndehyahvv ydgdtvseys ysgtdwigyd
      181 gtvekkveya ktqnlggyff walgydmnwt lsgiasntwe rmh
//
LOCUS       XP_016673893             223 aa            linear   PLN 06-AUG-2024
DEFINITION  class V chitinase CHIT5 [Gossypium hirsutum].
ACCESSION   XP_016673893
VERSION     XP_016673893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="class V chitinase CHIT5"
                     /calculated_mol_wt=24852
     Region          <1..212
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     CDS             1..223
                     /gene="LOC107893421"
                     /coded_by="XM_016818404.2:441..1112"
                     /db_xref="GeneID:107893421"
ORIGIN      
        1 msnleaffke wreaveseds asskppllls aavyfassff ldlprtyptd aiarcldfvn
       61 pmcfdyhgsw dtsvtgehal lydktsnist sygipswiea gvppkklvmg ipfygkswel
      121 khpknhgiga pangvgpgnn gimlysdivk yndehyahvv ydgdtvseys ysgtdwigyd
      181 gtvekkveya ktqnlggyff walgydmnwt lsgiasntwe rmh
//
LOCUS       XP_016673891              51 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L39-3 [Gossypium hirsutum].
ACCESSION   XP_016673891
VERSION     XP_016673891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..51
                     /product="60S ribosomal protein L39-3"
                     /calculated_mol_wt=6357
     Region          10..50
                     /region_name="Ribosomal_L39"
                     /note="Ribosomal L39 protein; pfam00832"
                     /db_xref="CDD:425894"
     CDS             1..51
                     /gene="LOC107893420"
                     /coded_by="XM_016818402.2:206..361"
                     /db_xref="GeneID:107893420"
ORIGIN      
        1 mpshktfmik kklakkmrqn rpipywirmr tdntirynak rrhwrrtklg f
//
LOCUS       XP_040941531             436 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941531
VERSION     XP_040941531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085597.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..436
                     /product="uncharacterized protein"
                     /calculated_mol_wt=47554
     Region          32..375
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     CDS             1..436
                     /gene="LOC107894464"
                     /coded_by="XM_041085597.1:252..1562"
                     /db_xref="GeneID:107894464"
ORIGIN      
        1 mvlfdssisp lthsaklssp lllsslshrp lryavlgagf aglsvawhll kespkdlnlh
       61 idlydemgig ggasgvsggl lhpyspkvkl lwrgaecwke cmkllsiaeq avsseedfvs
      121 lsgefdqdfg gildrrrgii rpatnmktln vlndnakncl anckieiidk naaeklvphi
      181 hmpfnlafym peainvnsky ylnalflacq nivkelsass fgkknlclqk ksvyelrele
      241 geydaviicl gakadllpel agklplrtcr gvilhlqlpd kigedypdhg psilsdawla
      301 ikgnrslylg stwewksrns ssnvstdeas dalqellpka saiypgitsw sfagaraglr
      361 amppltphgs lpllgcvnni lgndlkckyw llgglgsrgl lyhgwlgklt aeavlscneq
      421 iipseltswk nkdsrp
//
LOCUS       XP_016673890             734 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA replication licensing factor MCM5 [Gossypium hirsutum].
ACCESSION   XP_016673890
VERSION     XP_016673890.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673890.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..734
                     /product="DNA replication licensing factor MCM5"
                     /calculated_mol_wt=80960
     Region          41..134
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          138..651
                     /region_name="MCM"
                     /note="MCM helicase family; cl28901"
                     /db_xref="CDD:475121"
     Site            order(343,364,366..370,372,383..385,389..390,393,404,406,
                     410..413,421..423,427..433,436..437,447,454,461,465,467,
                     469,471..473,476..478,494,508,511,515,524,526,531,535,
                     539..540,542..544,558,576,581..582,585,588..589,592..593,
                     612,615,619)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350662"
     Site            order(343..345,384..390,465,515,534,541,612..613)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350662"
     Site            order(419,421,472..473)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350662"
     CDS             1..734
                     /gene="LOC107893417"
                     /coded_by="XM_016818401.2:106..2310"
                     /db_xref="GeneID:107893417"
ORIGIN      
        1 msgwdegavy ysnqaqftea sseaeaaaas ttasrhsvll kfkefirnfe keknvfpyre
       61 slvnnpkflm vhledllsfd sdlpsllrss psdylplfet aaaevlaglk mkvagdsgem
      121 vepqtgevqi lltskedpvs mrslgaqyis klvkisgiti aasrikakat yvhlicknck
      181 saravpcrpg lggaivprsc dhvpqpgeep cpidpwlivp dkskyvdqqt lklqenpedv
      241 ptgelprnml lsvdrhlvqt ivpgsrltim giysifqasn sstnhkgava vrqpyirivg
      301 meetneassr gpatftqeev eefkkfasnq dtyegicskv apsifghedv kkavacllfg
      361 garknlpdgv klrgdinvll lgdpstaksq flkfvektap iavytsgkgs saagltasvi
      421 rdsssrefyl eggamvladg gvvcidefdk mrpedrvaih eameqqtisi akagittvln
      481 srtsvlaaan ppsgryddlk taqdnidlqt tilsrfdlif ivkdirmydq dktiashiik
      541 vhasaqtvsn dsrtskeenw lkryiqycrs echprlseaa caklqsdyvd irrgmrqqan
      601 etgesaaipi tvrqleaiir lsealakmkl shvategdva ealrlfkist mdaarsginq
      661 hinitpdman eikqaenqik rrlgignris errliddltr mgmnesivrr ailimhqrge
      721 veyqrerhii vrkv
//
LOCUS       XP_016673889            2166 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: helicase and polymerase-containing protein
            TEBICHI-like [Gossypium hirsutum].
ACCESSION   XP_016673889
VERSION     XP_016673889.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818400.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673889.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2166
                     /product="LOW QUALITY PROTEIN: helicase and
                     polymerase-containing protein TEBICHI-like"
                     /calculated_mol_wt=238755
     Region          490..1052
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          <1622..1716
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Region          1721..2145
                     /region_name="DNA_pol_A_theta"
                     /note="DNA polymerase theta is a low-fidelity family A
                     enzyme implicated in translesion synthesis and in somatic
                     hypermutation; cd08638"
                     /db_xref="CDD:176475"
     Site            order(1810,1814,1817..1818,1847..1849,1851,1853..1856,
                     1905..1906,1935,1955,1959,2043,2050,2098..2100)
                     /site_type="active"
                     /db_xref="CDD:176475"
     Site            order(1810,1814,1817..1818,1847..1849,1851,1853..1856,
                     1967,2042..2043,2046,2050,2098..2100)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176475"
     Site            order(1905..1906,1908,1935,1955,1959,2100)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176475"
     CDS             1..2166
                     /gene="LOC107893414"
                     /coded_by="XM_016818400.2:177..6677"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107893414"
ORIGIN      
        1 mmasgsprar idkffaskkr ktqspglktg rleknekttv ecspsakgtl nsylrtsqdn
       61 eivhpscttr gkdrikmila seidksfkhe nehslilaet ksqafeethk gismglseag
      121 ntafgdhaeg aqigenpelk kfatdflsly csevpvnvds psetkvnnlk rhggpsmlse
      181 edkrfkkrhl iaqqiqtedi avcstkknle yetgeflcnp sqdvntssnp felqaglrkc
      241 ttatksvvht mecrtpgssv ikgcshrtpq smrgssmfsp geafwneaie iadglfsqsa
      301 mlstrvaegi nnpesqyevk ntgnlgntnv gykskeipde cesrvklqgi gaslesavkq
      361 kkeidkevsl lpvkhldfsf edknldgvic hvlekdsqea egsiinhilp ptvnklidha
      421 elqkteaggk leqasihvvp kvevnlssqd ndsitsmspa naakksigtd egnesstpls
      481 svalkdklsi sswlpleick iykkkgieql ypwqvdclqv dgvlqrrnlv ycastsagks
      541 fvaeilmlrr viltrkaall vlpyvsicve kaehlevlle plgkqvrsyy gnqgggtlpk
      601 dtsvavctie kanslvnrll eegrlseigi ividelhmvg dqsrgyllel lltklryaag
      661 egapesssge ssgsssgkad pahglqivgm satmpnveav adwlqaalyq tnfrpvplee
      721 fikvgntiyd knldlvrtip kavdlggkdp dhvvelcnev vqeghsvlif cstrkgcest
      781 akhvakflkk fsvtahgdns efiditsaid alrrcpagld peleetlpsg vayhhagltv
      841 eerevietcy rrgfvrvlta tstlaagvnl parrvifrqp rigrdfidgt rykqmagrag
      901 rtgidtkges vlickqxeik rikgllnesc pplqsclsed kngmthaile vvaggmvqta
      961 ndvnryvrct llnstkpfqe vvksaqeslr wlchrkflew ndetklygtt plgraafgss
     1021 lcpeeslivl ddlsraregf vlasdlhlvy lvtpinveve pdwelyyerf melsaleqsv
     1081 gyrvgvtepf lmrmahgvpi sksnglrdsl krlpaqfgnq lginnstmls deqtlrvckr
     1141 fyvalilsrl vqeapvgevc eafrvakgmv qalqenagrf asmvsvfcer lgwhdledlv
     1201 akfqnrvsfg vraeiveltn ipyvkgsrar alykaglrtp laiaeasipe ivkalfesss
     1261 wvaqeslaqr rmqfgvakki kngarkivld kaeearaaaf safkslgytv pqfsqplils
     1321 gspggqeaas tsagnaspcn vigveqihts amplietgkn lekvsspneg imltkasadn
     1381 lvasaevnid ttlqsnlgle npaavtgdkv navfeqgrsi kmatvgeyld qgmqdrlned
     1441 vsvgnadsac akgplnavna pggfdsflel wetapefcfd vhfnrrsean svapfeihgi
     1501 aicwenspvy yvnlpkdllw ldnrknnfls tsassdkcns lppehmlema klrwkrigdi
     1561 mgkngvqklt wnlkvqiqvl kssaisiqrf sgmhlggkdm gleiidnscl llppvlindg
     1621 idmciaawil wpdeersssp nlekevkkrl sseaaaaanq sgrwknqmrr aahngccrrv
     1681 aqtralysaf wkllisekli dvftcietpl vrvlaemelw giginmegcl warnllgkkl
     1741 rylekeaykl agmtfslsaa adianvlyeh lklpvpegrn kgkqhpstdk hcldllrdeh
     1801 pivpvikehr slakllnctl gsicslarls rstnkytlhg rwlqtstatg rlsmeepnlq
     1861 cvehmvefsl skdkngsdan tdhykinvrd ffiptqdnwl lltadysqie lrlmahfsnd
     1921 salikllskp qgdvftmmsa iwtgraedfv gsnerdqtkr liygilygmg adtlaeqlnc
     1981 tsdeakekik sfkssfpgva swlheavasc rqkgyietlk grkrflskik ignteekska
     2041 qrqavnsicq gsaadiikia miklhsvive gvdslesgss iltkfhmlkg rcrillqvhd
     2101 elvlevdpsv ideaasllrt smenavsllv plrvklnvgk twgslkpyqa dqqklyqmyr
     2161 fkenis
//
LOCUS       XP_040941532             985 aa            linear   PLN 06-AUG-2024
DEFINITION  ER membrane protein complex subunit 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941532
VERSION     XP_040941532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085598.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..985
                     /product="ER membrane protein complex subunit 1 isoform
                     X1"
                     /calculated_mol_wt=110048
     Region          62..>261
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          767..984
                     /region_name="EMC1_C"
                     /note="ER membrane protein complex subunit 1, C-terminal;
                     pfam07774"
                     /db_xref="CDD:462261"
     CDS             1..985
                     /gene="LOC107893415"
                     /coded_by="XM_041085598.1:135..3092"
                     /db_xref="GeneID:107893415"
ORIGIN      
        1 mairsflilf ilfffsslnp ilslyedqvg lvdwhqqylg kvkqavfhth ktgrkrvvvs
       61 teenvvasld lgqgeifwrh vlgsndvidg idialgkyvi tlssggsilr awnlpdgqmv
      121 wesslrgpkh skslflvrtn lkiekdnivi ifsngrlnav scmdgevlwe kdfegeslkv
      181 qqviqppgsn liyvvgfass slfemyqina lngellkhes aafsggflge vspvfsetvv
      241 aldstglill tisfqngkis fhqmpisnlv kdsfgpakii pssvtgifai kmnavtivir
      301 vkdesklevv ektnhetsis dalsisegqq afalvqhash eihlrvklah nwddnllkes
      361 vkmdqhrglv hkvyinnyir tdksygfral ivmedhslll lqqgeivwsr edglasiidv
      421 ttselpverd gvsvakvehn lfewlkghml klkgtlmlas pqdiaaiqsm rlknsekskm
      481 trdhngfrkl livltragkl falhtgdghi vwshllqslq kskvcqhpig lnlykwqvph
      541 hhamdenpsv lvigkcgpss dapgalsfvd tytgkelssl slvhsvaqvi plpytdsteq
      601 clhllidadk hahlypktpe aisiferefs niywysvedd ngiikghalr gkctgevade
      661 vcfdtrelws ivfpseseki iatvtrklne vvhtqakvia dqevmykyis rnllfvatva
      721 lkgsveigsv tpeeswlvay lidtvtgril hqvthhgsqg pvhavfsenw vvyhyfnlka
      781 hryemsviei ydqsradnkd vwklvlgkhn ltspislysr pdvitksqsy ffthsvkaia
      841 vtsttkgits kqlligtigd qvlaldkrfl dprrtvnptq aekeegiipl tdslpiipqs
      901 yvthalrveg lrgiitvpak lesttlvfah gvdlfftqla psrtydsltd dfnyalllit
      961 ivallaaifv twtlserkel qenwr
//
LOCUS       XP_040941534             823 aa            linear   PLN 06-AUG-2024
DEFINITION  ER membrane protein complex subunit 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941534
VERSION     XP_040941534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085600.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..823
                     /product="ER membrane protein complex subunit 1 isoform
                     X2"
                     /calculated_mol_wt=91866
     Region          605..822
                     /region_name="EMC1_C"
                     /note="ER membrane protein complex subunit 1, C-terminal;
                     pfam07774"
                     /db_xref="CDD:462261"
     CDS             1..823
                     /gene="LOC107893415"
                     /coded_by="XM_041085600.1:402..2873"
                     /db_xref="GeneID:107893415"
ORIGIN      
        1 mdgevlwekd fegeslkvqq viqppgsnli yvvgfasssl femyqinaln gellkhesaa
       61 fsggflgevs pvfsetvval dstglillti sfqngkisfh qmpisnlvkd sfgpakiips
      121 svtgifaikm navtivirvk desklevvek tnhetsisda lsisegqqaf alvqhashei
      181 hlrvklahnw ddnllkesvk mdqhrglvhk vyinnyirtd ksygfraliv medhsllllq
      241 qgeivwsred glasiidvtt selpverdgv svakvehnlf ewlkghmlkl kgtlmlaspq
      301 diaaiqsmrl knsekskmtr dhngfrklli vltragklfa lhtgdghivw shllqslqks
      361 kvcqhpigln lykwqvphhh amdenpsvlv igkcgpssda pgalsfvdty tgkelsslsl
      421 vhsvaqvipl pytdsteqcl hllidadkha hlypktpeai siferefsni ywysveddng
      481 iikghalrgk ctgevadevc fdtrelwsiv fpsesekiia tvtrklnevv htqakviadq
      541 evmykyisrn llfvatvalk gsveigsvtp eeswlvayli dtvtgrilhq vthhgsqgpv
      601 havfsenwvv yhyfnlkahr yemsvieiyd qsradnkdvw klvlgkhnlt spislysrpd
      661 vitksqsyff thsvkaiavt sttkgitskq lligtigdqv laldkrfldp rrtvnptqae
      721 keegiipltd slpiipqsyv thalrveglr giitvpakle sttlvfahgv dlfftqlaps
      781 rtydsltddf nyalllitiv allaaifvtw tlserkelqe nwr
//
LOCUS       XP_040941535             823 aa            linear   PLN 06-AUG-2024
DEFINITION  ER membrane protein complex subunit 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941535
VERSION     XP_040941535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085601.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..823
                     /product="ER membrane protein complex subunit 1 isoform
                     X2"
                     /calculated_mol_wt=91866
     Region          605..822
                     /region_name="EMC1_C"
                     /note="ER membrane protein complex subunit 1, C-terminal;
                     pfam07774"
                     /db_xref="CDD:462261"
     CDS             1..823
                     /gene="LOC107893415"
                     /coded_by="XM_041085601.1:356..2827"
                     /db_xref="GeneID:107893415"
ORIGIN      
        1 mdgevlwekd fegeslkvqq viqppgsnli yvvgfasssl femyqinaln gellkhesaa
       61 fsggflgevs pvfsetvval dstglillti sfqngkisfh qmpisnlvkd sfgpakiips
      121 svtgifaikm navtivirvk desklevvek tnhetsisda lsisegqqaf alvqhashei
      181 hlrvklahnw ddnllkesvk mdqhrglvhk vyinnyirtd ksygfraliv medhsllllq
      241 qgeivwsred glasiidvtt selpverdgv svakvehnlf ewlkghmlkl kgtlmlaspq
      301 diaaiqsmrl knsekskmtr dhngfrklli vltragklfa lhtgdghivw shllqslqks
      361 kvcqhpigln lykwqvphhh amdenpsvlv igkcgpssda pgalsfvdty tgkelsslsl
      421 vhsvaqvipl pytdsteqcl hllidadkha hlypktpeai siferefsni ywysveddng
      481 iikghalrgk ctgevadevc fdtrelwsiv fpsesekiia tvtrklnevv htqakviadq
      541 evmykyisrn llfvatvalk gsveigsvtp eeswlvayli dtvtgrilhq vthhgsqgpv
      601 havfsenwvv yhyfnlkahr yemsvieiyd qsradnkdvw klvlgkhnlt spislysrpd
      661 vitksqsyff thsvkaiavt sttkgitskq lligtigdqv laldkrfldp rrtvnptqae
      721 keegiipltd slpiipqsyv thalrveglr giitvpakle sttlvfahgv dlfftqlaps
      781 rtydsltddf nyalllitiv allaaifvtw tlserkelqe nwr
//
LOCUS       XP_040941536             823 aa            linear   PLN 06-AUG-2024
DEFINITION  ER membrane protein complex subunit 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941536
VERSION     XP_040941536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085602.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..823
                     /product="ER membrane protein complex subunit 1 isoform
                     X2"
                     /calculated_mol_wt=91866
     Region          605..822
                     /region_name="EMC1_C"
                     /note="ER membrane protein complex subunit 1, C-terminal;
                     pfam07774"
                     /db_xref="CDD:462261"
     CDS             1..823
                     /gene="LOC107893415"
                     /coded_by="XM_041085602.1:603..3074"
                     /db_xref="GeneID:107893415"
ORIGIN      
        1 mdgevlwekd fegeslkvqq viqppgsnli yvvgfasssl femyqinaln gellkhesaa
       61 fsggflgevs pvfsetvval dstglillti sfqngkisfh qmpisnlvkd sfgpakiips
      121 svtgifaikm navtivirvk desklevvek tnhetsisda lsisegqqaf alvqhashei
      181 hlrvklahnw ddnllkesvk mdqhrglvhk vyinnyirtd ksygfraliv medhsllllq
      241 qgeivwsred glasiidvtt selpverdgv svakvehnlf ewlkghmlkl kgtlmlaspq
      301 diaaiqsmrl knsekskmtr dhngfrklli vltragklfa lhtgdghivw shllqslqks
      361 kvcqhpigln lykwqvphhh amdenpsvlv igkcgpssda pgalsfvdty tgkelsslsl
      421 vhsvaqvipl pytdsteqcl hllidadkha hlypktpeai siferefsni ywysveddng
      481 iikghalrgk ctgevadevc fdtrelwsiv fpsesekiia tvtrklnevv htqakviadq
      541 evmykyisrn llfvatvalk gsveigsvtp eeswlvayli dtvtgrilhq vthhgsqgpv
      601 havfsenwvv yhyfnlkahr yemsvieiyd qsradnkdvw klvlgkhnlt spislysrpd
      661 vitksqsyff thsvkaiavt sttkgitskq lligtigdqv laldkrfldp rrtvnptqae
      721 keegiipltd slpiipqsyv thalrveglr giitvpakle sttlvfahgv dlfftqlaps
      781 rtydsltddf nyalllitiv allaaifvtw tlserkelqe nwr
//
LOCUS       XP_016673888             421 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,4-xylosyltransferase IRX9H [Gossypium hirsutum].
ACCESSION   XP_016673888
VERSION     XP_016673888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="probable beta-1,4-xylosyltransferase IRX9H"
                     /calculated_mol_wt=47998
     Region          168..398
                     /region_name="GlcAT-I"
                     /note="Beta1,3-glucuronyltransferase I (GlcAT-I) is
                     involved in the initial steps of proteoglycan synthesis;
                     cd00218"
                     /db_xref="CDD:132995"
     Site            order(177,207,265..268,302,318,324,329,366,394)
                     /site_type="active"
                     /db_xref="CDD:132995"
     Site            order(180..181,183..185,187..188,191..192,194..195,269,
                     271..273,291,300..301,315,317,390,393,395,397..398)
                     /site_type="active"
                     /note="putative dimerization interface [active]"
                     /db_xref="CDD:132995"
     Site            265..267
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:132995"
     CDS             1..421
                     /gene="LOC107893413"
                     /coded_by="XM_016818399.2:522..1787"
                     /db_xref="GeneID:107893413"
ORIGIN      
        1 masirrtlsp lprqgtsntg eeaersvpsp lsnpascnen yppiggrlls slfglsesrp
       61 lilsvfstks arpfnrskqk eqiwkrvllh fficfivgll igltpfismd isytnpsskg
      121 qafsygivst vgnslnldnk gvddnvgnld namtnpsvlv dknqetrkll ivvtptytrp
      181 lqayylnrla ytlklakppl lwivvemnlq seetadilrr ssvmyrhlvc krnltdikdr
      241 qvhqrnvals hiethrldgi iyfanednvy sidlfqqmrh irqfgtwtva kqtwdksrfg
      301 legpvcngaq vigwhlnrls rrfrrfhaem sgfafnstil rdqkrwhrpt lepirqldtv
      361 kdgfqvssfi eqvvedesqm eglpldcsri mvwelsiess nsfypqkwsv knyldviapl
      421 a
//
LOCUS       XP_016673887             416 aa            linear   PLN 06-AUG-2024
DEFINITION  protein JINGUBANG [Gossypium hirsutum].
ACCESSION   XP_016673887
VERSION     XP_016673887.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818398.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673887.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..416
                     /product="protein JINGUBANG"
                     /calculated_mol_wt=46971
     Region          94..406
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(108,112,118..119,131..132,148,152,158..159,190..191,
                     208,213,219..220,233,250,255,261..262,278..279,299,303,
                     309..310,326..327,342,347,353..354,370..371,395,399,
                     405..406)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          137..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          195..232
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          238..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          283..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          333..369
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..416
                     /gene="LOC107893412"
                     /coded_by="XM_016818398.2:74..1324"
                     /db_xref="GeneID:107893412"
ORIGIN      
        1 mefhgrktgh cymdnesnpl qsptrlsirt hldmydrdpq fsperppspr ssasalqlml
       61 ppgspetpwt lsplqtpspa llyhciaslh rqdgnihsia iskglvftvs dskrirvwrq
      121 peciergcik tssgeirail aygnklftah rdckiriwny tvsdsfgykk istlpkrssf
      181 llfpktssqq hkdcvscmay yhaegllytg sydrtvkawr lvdnkcvdsf vvheskvnai
      241 vvnqddgcvf tcssdgsvki wrrlykensh tltmtlrfqq spvnamaiss tlsncflysg
      301 ssdgtvnfwe kektscrfnh ggflqghrfs vlclvaiekl ifsgsddtti rvwrreegsc
      361 fheclavldg hrgpvkclaa clqmekivmg flvysasldq tfkvwrvkvm peeqtc
//
LOCUS       XP_016673885             242 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex exonuclease RRP46 homolog [Gossypium hirsutum].
ACCESSION   XP_016673885
VERSION     XP_016673885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818396.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..242
                     /product="exosome complex exonuclease RRP46 homolog"
                     /calculated_mol_wt=26260
     Region          14..228
                     /region_name="RNase_PH_RRP46"
                     /note="RRP46 subunit of eukaryotic exosome; cd11372"
                     /db_xref="CDD:206777"
     Site            order(22,24..25,27..28,47..49,97,99,131,133..135,137,174,
                     228)
                     /site_type="other"
                     /note="Rrp40 interface [polypeptide binding]"
                     /db_xref="CDD:206777"
     Site            order(26,28,43,45..47,63,65,70,79,82,86,100,105,110,
                     128..130,195..206,209,213)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:206777"
     CDS             1..242
                     /gene="LOC107893411"
                     /coded_by="XM_016818396.2:150..878"
                     /db_xref="GeneID:107893411"
ORIGIN      
        1 mevdredgrs qnqlrplacs rnilhrahgs aswsqgdtkv laavygpkag tkknenpeka
       61 cieviwkpkt gqigkpekey emilkrtles iciltvnpnt ttsiivqvvn ddgallpsai
      121 naacmalvda gipmkhlava iccclaksgy vildptklee qkmkafaylv fpnsvrsvlp
      181 egslrvegep iengiitsvt hgimsvadyf yclergraas vklsdflrrn lqqqstdssk
      241 ag
//
LOCUS       XP_016673884             840 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glycosyltransferase At5g03795 [Gossypium hirsutum].
ACCESSION   XP_016673884
VERSION     XP_016673884.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673884.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..840
                     /product="probable glycosyltransferase At5g03795"
                     /calculated_mol_wt=94814
     Region          226..>417
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          508..791
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..840
                     /gene="LOC107893410"
                     /coded_by="XM_016818395.2:452..2974"
                     /db_xref="GeneID:107893410"
ORIGIN      
        1 mghelksliq ldtrkliwli gitfavivtf qyielpygnv lwslfpfgkv svdekssila
       61 sgpsstesgf yfngtnagne tvhddeifeg kdidtdvite advglnksst fdegtkawke
      121 sstaepveln knstvdkagn etahddeife grdidtdvit eadvglnkss tfdegtklwk
      181 esstaepvel nknstvdntg netahddeif egrdidtdvi teadvglnks stfdegteal
      241 kesstaelve lnknstvnna esskseefek dsnitslnnl nqtgavneta kaddftpevg
      301 lnrssildke lnersnitvl divessnnks vaedvgksee sfaskndtvd nntsnnnapd
      361 tglgptnits ekgvetnisa pvvsfnssis sveqhvtpsf dknekpkpiq ndftkpsdns
      421 sprkapkmkk kpemlppavt tiadmnnlld qsrvsyespt pkwssradkv llearlqien
      481 apiikndpql yaplfrnlsm fkrsyelmen tlkvyvykeg krpivhtpvl rgiyasegwf
      541 mkqletnkkf vtknprdayl fylpfssrml eetlyvpdsh shknlieylk nyvdtiaaky
      601 pfwnrtegad hflvachdwa psetrnhman ciralcnsdv regyvfgkdv slpetyvrnp
      661 qkplrdlggn ppskrpilaf fagsmhgylr pilleqwgnk dpdmkifgkm pnvkgkmnyi
      721 rhmksskycl cprgyevnsp rvveaifyec vpviisdnfv ppffevlnwe sfsvfilekd
      781 ipnlkkills ipdkryrqmq lrvkkiqqhf lwhpkpekyd ifhmilhsvw ynrvfqmkpr
//
LOCUS       XP_016675513             152 aa            linear   PLN 06-AUG-2024
DEFINITION  lachrymatory-factor synthase [Gossypium hirsutum].
ACCESSION   XP_016675513
VERSION     XP_016675513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820024.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="lachrymatory-factor synthase"
                     /calculated_mol_wt=17056
     Region          21..149
                     /region_name="PYR_PYL_RCAR_like"
                     /note="Pyrabactin resistance 1 (PYR1), PYR1-like (PYL),
                     regulatory component of abscisic acid receptors (RCARs),
                     and related proteins; cd07821"
                     /db_xref="CDD:176863"
     Site            order(25..27,29..30,39,41,45,57,59,61,68,70,72,75,82,84,
                     86,93,96..98,100,102,112,114,116,118,129..133,135..137,
                     139..141,144)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176863"
     Site            order(40..41,43,63..64,92..93,128..129,131..132,135,139)
                     /site_type="other"
                     /note="protein interface [polypeptide binding]"
                     /db_xref="CDD:176863"
     Site            order(63..64,66)
                     /site_type="other"
                     /note="gate"
                     /db_xref="CDD:176863"
     CDS             1..152
                     /gene="LOC107894815"
                     /coded_by="XM_016820024.2:40..498"
                     /db_xref="GeneID:107894815"
ORIGIN      
        1 maeetvpkwe gkstaelktt tpeqiwpfla efcnidkffp svdtcyrkeg tpgqpglvry
       61 cesstswaie klltidpinh slsyeivenn mgfkgylatl nvlavegdgc kiewsfisdp
      121 iegmkledfv syldntllfm akkledavra qi
//
LOCUS       XP_016675511             164 aa            linear   PLN 06-AUG-2024
DEFINITION  lachrymatory-factor synthase [Gossypium hirsutum].
ACCESSION   XP_016675511
VERSION     XP_016675511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820022.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..164
                     /product="lachrymatory-factor synthase"
                     /calculated_mol_wt=18214
     Region          9..162
                     /region_name="PYR_PYL_RCAR_like"
                     /note="Pyrabactin resistance 1 (PYR1), PYR1-like (PYL),
                     regulatory component of abscisic acid receptors (RCARs),
                     and related proteins; cd07821"
                     /db_xref="CDD:176863"
     Site            order(11,13,15,25..27,29..30,39,41,45,57,59,61,63,84,86,
                     88,91,98,100,102,109,112..114,116,118,131,133,135,137,146,
                     148..150,152..154,157)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176863"
     Site            order(64..65,67)
                     /site_type="other"
                     /note="gate"
                     /db_xref="CDD:176863"
     CDS             1..164
                     /gene="LOC107894813"
                     /coded_by="XM_016820022.2:49..543"
                     /db_xref="GeneID:107894813"
ORIGIN      
        1 mkqnsqpkwe akvsskltka spdktwaiyt dffnfhkwyp tlatcygihg tngelgcirf
       61 csgfsissqg gdgdsngggs ekwskerlva vdhsnrslsy eivesnirfn syvstvkivp
      121 ggvdnqqgcv iewsftvdpv wkldemkkly eeglqglakr idds
//
LOCUS       XP_040941538             638 aa            linear   PLN 06-AUG-2024
DEFINITION  casein kinase 1-like protein HD16 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941538
VERSION     XP_040941538.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085604.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..638
                     /product="casein kinase 1-like protein HD16 isoform X1"
                     /calculated_mol_wt=72108
     Region          37..347
                     /region_name="STKc_CK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1; cd14016"
                     /db_xref="CDD:270918"
     Site            order(44..50,52,68,70,116..120,122,124,202,204,206..207,
                     209,225,228,252..255)
                     /site_type="active"
                     /db_xref="CDD:270918"
     Site            order(44..50,52,68,70,116..120,204,206..207,209,225)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270918"
     Site            order(48,122,124,202,204,206,228,252..255)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270918"
     Site            order(224..234,238..245,249..255)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270918"
     CDS             1..638
                     /gene="LOC107893405"
                     /coded_by="XM_041085604.1:614..2530"
                     /db_xref="GeneID:107893405"
ORIGIN      
        1 mdefdsggrs gdkgpgaede gstaplpekv qvggspmyri erklgkggfg qvyvgrriga
       61 gpgalevalk fehrsskgcn ygppyewqvy nalggshgvp rvhykgrqsd yyvmvmdmlg
      121 pslwdvwnnn shtmsiemva ciaieaisil ekmhsrgwgv hhcfwvervv ilpaiqvffl
      181 slehilpfni dasiccryvh gdvkpenfll gtpgtpdekk lflvdlglat rwrdsssgqh
      241 veydqrpdvf rgtvryasvh ahlgrtgsrr ddleslaytl ifllrgrlpw qgyqgenkgf
      301 lvckkkmats petlccfcpl pfrqfveyvv nlkfdeepny aryislfdgi vgpnpdirpi
      361 ntdgaqkliy qvgqkrgrlt meeeedeqpk kkvrmgmpat qwisvynarr pmkqryhynv
      421 advrlpqhie kgnedglfis svascsnlwa limdagtgft aqvyqlspyf lhkewimeqw
      481 eknyyisaia ganngsslvv mskgtqylqq sykvsdsfpf kwinkkwreg fyvtamatag
      541 srwaivmsrg apfsdqvvel dflypsegih rrwdggyrit staatwdqaa fvlsvprrkp
      601 adetqetlrt safpsthvke kwaknlyias vcygrtvs
//
LOCUS       XP_016673873             598 aa            linear   PLN 06-AUG-2024
DEFINITION  casein kinase 1-like protein HD16 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673873
VERSION     XP_016673873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="casein kinase 1-like protein HD16 isoform X2"
                     /calculated_mol_wt=67417
     Region          37..307
                     /region_name="STKc_CK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1; cd14016"
                     /db_xref="CDD:270918"
     Site            order(44..50,52,68,70,116..120,122,124,162,164,166..167,
                     169,185,188,212..215)
                     /site_type="active"
                     /db_xref="CDD:270918"
     Site            order(44..50,52,68,70,116..120,164,166..167,169,185)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270918"
     Site            order(48,122,124,162,164,166,188,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270918"
     Site            order(184..194,198..205,209..215)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270918"
     CDS             1..598
                     /gene="LOC107893405"
                     /coded_by="XM_016818384.2:616..2412"
                     /db_xref="GeneID:107893405"
ORIGIN      
        1 mdefdsggrs gdkgpgaede gstaplpekv qvggspmyri erklgkggfg qvyvgrriga
       61 gpgalevalk fehrsskgcn ygppyewqvy nalggshgvp rvhykgrqsd yyvmvmdmlg
      121 pslwdvwnnn shtmsiemva ciaieaisil ekmhsrgyvh gdvkpenfll gtpgtpdekk
      181 lflvdlglat rwrdsssgqh veydqrpdvf rgtvryasvh ahlgrtgsrr ddleslaytl
      241 ifllrgrlpw qgyqgenkgf lvckkkmats petlccfcpl pfrqfveyvv nlkfdeepny
      301 aryislfdgi vgpnpdirpi ntdgaqkliy qvgqkrgrlt meeeedeqpk kkvrmgmpat
      361 qwisvynarr pmkqryhynv advrlpqhie kgnedglfis svascsnlwa limdagtgft
      421 aqvyqlspyf lhkewimeqw eknyyisaia ganngsslvv mskgtqylqq sykvsdsfpf
      481 kwinkkwreg fyvtamatag srwaivmsrg apfsdqvvel dflypsegih rrwdggyrit
      541 staatwdqaa fvlsvprrkp adetqetlrt safpsthvke kwaknlyias vcygrtvs
//
LOCUS       XP_016673874             270 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673874
VERSION     XP_016673874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..270
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X1"
                     /calculated_mol_wt=30946
     Region          138..266
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..270
                     /gene="LOC107893407"
                     /coded_by="XM_016818385.2:277..1089"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rgcrclffir ydhdcseetv rlrrlcrvlg
//
LOCUS       XP_016673875             270 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673875
VERSION     XP_016673875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..270
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X1"
                     /calculated_mol_wt=30946
     Region          138..266
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..270
                     /gene="LOC107893407"
                     /coded_by="XM_016818386.2:95..907"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rgcrclffir ydhdcseetv rlrrlcrvlg
//
LOCUS       XP_016673876             265 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673876
VERSION     XP_016673876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..265
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X2"
                     /calculated_mol_wt=30281
     Region          138..>244
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..265
                     /gene="LOC107893407"
                     /coded_by="XM_016818387.2:277..1074"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rgcrnirpwc hlklsalifl lftfc
//
LOCUS       XP_016673877             259 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016673877
VERSION     XP_016673877.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818388.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..259
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X3"
                     /calculated_mol_wt=29611
     Region          138..254
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..259
                     /gene="LOC107893407"
                     /coded_by="XM_016818388.2:277..1056"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rgcrclffir ydhdcsefa
//
LOCUS       XP_016673878             255 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016673878
VERSION     XP_016673878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..255
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X4"
                     /calculated_mol_wt=29296
     Region          123..251
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..255
                     /gene="LOC107893407"
                     /coded_by="XM_016818389.2:494..1261"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnevqnwftt rqqesevkvp svtntykdes rlpqtcllnd gdqscqilkg lvakvgekvl
      121 dlselefeak sstdgawydv dmflshrvts sgetevcvrf vgfgaeedew vnvkkavrgl
      181 sipfehsecc kvmvgglvlc lqerrdqsih ydahvleier kthdirgcrc lffirydhdc
      241 seetvrlrrl crvlg
//
LOCUS       XP_040941539             255 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941539
VERSION     XP_040941539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085605.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..255
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X4"
                     /calculated_mol_wt=29296
     Region          123..251
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..255
                     /gene="LOC107893407"
                     /coded_by="XM_041085605.1:93..860"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnevqnwftt rqqesevkvp svtntykdes rlpqtcllnd gdqscqilkg lvakvgekvl
      121 dlselefeak sstdgawydv dmflshrvts sgetevcvrf vgfgaeedew vnvkkavrgl
      181 sipfehsecc kvmvgglvlc lqerrdqsih ydahvleier kthdirgcrc lffirydhdc
      241 seetvrlrrl crvlg
//
LOCUS       XP_040941540             250 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040941540
VERSION     XP_040941540.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085606.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..250
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform
                     X5"
                     /calculated_mol_wt=28631
     Region          123..>229
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..250
                     /gene="LOC107893407"
                     /coded_by="XM_041085606.1:277..1029"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnevqnwftt rqqesevkvp svtntykdes rlpqtcllnd gdqscqilkg lvakvgekvl
      121 dlselefeak sstdgawydv dmflshrvts sgetevcvrf vgfgaeedew vnvkkavrgl
      181 sipfehsecc kvmvgglvlc lqerrdqsih ydahvleier kthdirgcrn irpwchlkls
      241 alifllftfc
//
LOCUS       XP_040941542             249 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040941542
VERSION     XP_040941542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085608.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..249
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform
                     X6"
                     /calculated_mol_wt=28185
     Region          138..>241
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..249
                     /gene="LOC107893407"
                     /coded_by="XM_041085608.1:277..1026"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rgtsdhgai
//
LOCUS       XP_016673880             248 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X7 [Gossypium
            hirsutum].
ACCESSION   XP_016673880
VERSION     XP_016673880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X7"
                     /calculated_mol_wt=28301
     Region          116..244
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..248
                     /gene="LOC107893407"
                     /coded_by="XM_016818391.2:153..899"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 meklfmesre llqskefcqk larnfssssg ragkpivkwn efrnspiips piivsqvqnw
       61 fttrqqesev kvpsvtntyk desrlpqtcl lndgdqscqi lkglvakvge kvldlselef
      121 eaksstdgaw ydvdmflshr vtssgetevc vrfvgfgaee dewvnvkkav rglsipfehs
      181 ecckvmvggl vlclqerrdq sihydahvle ierkthdirg crclffiryd hdcseetvrl
      241 rrlcrvlg
//
LOCUS       XP_040941543             246 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X8 [Gossypium
            hirsutum].
ACCESSION   XP_040941543
VERSION     XP_040941543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085609.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..246
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform
                     X8"
                     /calculated_mol_wt=28063
     Region          138..>241
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..246
                     /gene="LOC107893407"
                     /coded_by="XM_041085609.1:277..1017"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rdykpl
//
LOCUS       XP_040941544             244 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X9 [Gossypium
            hirsutum].
ACCESSION   XP_040941544
VERSION     XP_040941544.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085610.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform
                     X9"
                     /calculated_mol_wt=27961
     Region          123..239
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..244
                     /gene="LOC107893407"
                     /coded_by="XM_041085610.1:276..1010"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnevqnwftt rqqesevkvp svtntykdes rlpqtcllnd gdqscqilkg lvakvgekvl
      121 dlselefeak sstdgawydv dmflshrvts sgetevcvrf vgfgaeedew vnvkkavrgl
      181 sipfehsecc kvmvgglvlc lqerrdqsih ydahvleier kthdirgcrc lffirydhdc
      241 sefa
//
LOCUS       XP_040941545             244 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X9 [Gossypium
            hirsutum].
ACCESSION   XP_040941545
VERSION     XP_040941545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085611.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform
                     X9"
                     /calculated_mol_wt=27961
     Region          123..239
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..244
                     /gene="LOC107893407"
                     /coded_by="XM_041085611.1:94..828"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnevqnwftt rqqesevkvp svtntykdes rlpqtcllnd gdqscqilkg lvakvgekvl
      121 dlselefeak sstdgawydv dmflshrvts sgetevcvrf vgfgaeedew vnvkkavrgl
      181 sipfehsecc kvmvgglvlc lqerrdqsih ydahvleier kthdirgcrc lffirydhdc
      241 sefa
//
LOCUS       XP_016673881             244 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X10 [Gossypium
            hirsutum].
ACCESSION   XP_016673881
VERSION     XP_016673881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818392.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X10"
                     /calculated_mol_wt=27763
     Region          138..>244
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..244
                     /gene="LOC107893407"
                     /coded_by="XM_016818392.2:277..1011"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mdrlrprqrp vfsgftkaei ekmeklfmes rellqskefc qklarnfsss sgragkpivk
       61 wnefrnspii pspiivsqvq nwfttrqqes evkvpsvtnt ykdesrlpqt cllndgdqsc
      121 qilkglvakv gekvldlsel efeaksstdg awydvdmfls hrvtssgete vcvrfvgfga
      181 eedewvnvkk avrglsipfe hsecckvmvg glvlclqerr dqsihydahv leierkthdi
      241 rgcr
//
LOCUS       XP_016673882             236 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X11 [Gossypium
            hirsutum].
ACCESSION   XP_016673882
VERSION     XP_016673882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..236
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X11"
                     /calculated_mol_wt=27187
     Region          104..232
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..236
                     /gene="LOC107893407"
                     /coded_by="XM_016818393.2:146..856"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 mvsklrnqrl kkwrncswnq esccrvksfv knlqeilvhp qvvlvqnwft trqqesevkv
       61 psvtntykde srlpqtclln dgdqscqilk glvakvgekv ldlselefea ksstdgawyd
      121 vdmflshrvt ssgetevcvr fvgfgaeede wvnvkkavrg lsipfehsec ckvmvgglvl
      181 clqerrdqsi hydahvleie rkthdirgcr clffirydhd cseetvrlrr lcrvlg
//
LOCUS       XP_016673883             233 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X12 [Gossypium
            hirsutum].
ACCESSION   XP_016673883
VERSION     XP_016673883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..233
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform
                     X12"
                     /calculated_mol_wt=26651
     Region          101..229
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..233
                     /gene="LOC107893407"
                     /coded_by="XM_016818394.2:148..849"
                     /db_xref="GeneID:107893407"
ORIGIN      
        1 meklfmesre llqskefcqk larnfssssg ragkpivkwn evqnwfttrq qesevkvpsv
       61 tntykdesrl pqtcllndgd qscqilkglv akvgekvldl selefeakss tdgawydvdm
      121 flshrvtssg etevcvrfvg fgaeedewvn vkkavrglsi pfehsecckv mvgglvlclq
      181 errdqsihyd ahvleierkt hdirgcrclf firydhdcse etvrlrrlcr vlg
//
LOCUS       XP_016673869             418 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673869
VERSION     XP_016673869.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673869.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..418
                     /product="histone deacetylase 2 isoform X1"
                     /calculated_mol_wt=46601
     Region          117..400
                     /region_name="HDAC_classIV"
                     /note="Histone deacetylase class IV also known as histone
                     deacetylase 11; cd09993"
                     /db_xref="CDD:212519"
     Site            order(123,222..225,233..235,262,264,338,342,382..383,385)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212519"
     CDS             1..418
                     /gene="LOC107893401"
                     /coded_by="XM_016818380.2:219..1475"
                     /db_xref="GeneID:107893401"
ORIGIN      
        1 mtfplltlsp qqpfwkfrth rvianttest rnlckstlyl flalatpfia yrcfnsstmf
       61 wsssssssqp atkidadslr rqrinsskly qpdasskvpv iyssyydisf lgieklhpfd
      121 sskwgricrf lmsegylekn sivdpleast edllvvhtea ylnslknsvn varitevppv
      181 amlpnwlvqm kvlypfrrqv ggtvlaakla kdqgwainvg ggfhhcsgdr gggfcayadi
      241 slcihfafvr lnisrvmiid ldahqgnghe rdfgndervy ildmynpgiy pfdmtarnyi
      301 nqkvevmtgt ttdeylkqld kalavagsnf apelivynag tdildgdplg glkvspdgvi
      361 qrdekvfrfa rernipivmv tsggymktsa rviansiinl skkglietnv hsgrkimi
//
LOCUS       XP_016673870             418 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673870
VERSION     XP_016673870.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818381.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673870.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..418
                     /product="histone deacetylase 2 isoform X1"
                     /calculated_mol_wt=46601
     Region          117..400
                     /region_name="HDAC_classIV"
                     /note="Histone deacetylase class IV also known as histone
                     deacetylase 11; cd09993"
                     /db_xref="CDD:212519"
     Site            order(123,222..225,233..235,262,264,338,342,382..383,385)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212519"
     CDS             1..418
                     /gene="LOC107893401"
                     /coded_by="XM_016818381.2:219..1475"
                     /db_xref="GeneID:107893401"
ORIGIN      
        1 mtfplltlsp qqpfwkfrth rvianttest rnlckstlyl flalatpfia yrcfnsstmf
       61 wsssssssqp atkidadslr rqrinsskly qpdasskvpv iyssyydisf lgieklhpfd
      121 sskwgricrf lmsegylekn sivdpleast edllvvhtea ylnslknsvn varitevppv
      181 amlpnwlvqm kvlypfrrqv ggtvlaakla kdqgwainvg ggfhhcsgdr gggfcayadi
      241 slcihfafvr lnisrvmiid ldahqgnghe rdfgndervy ildmynpgiy pfdmtarnyi
      301 nqkvevmtgt ttdeylkqld kalavagsnf apelivynag tdildgdplg glkvspdgvi
      361 qrdekvfrfa rernipivmv tsggymktsa rviansiinl skkglietnv hsgrkimi
//
LOCUS       XP_016673871             367 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673871
VERSION     XP_016673871.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818382.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673871.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..367
                     /product="histone deacetylase 2 isoform X2"
                     /calculated_mol_wt=40891
     Region          117..353
                     /region_name="HDAC_classIV"
                     /note="Histone deacetylase class IV also known as histone
                     deacetylase 11; cd09993"
                     /db_xref="CDD:212519"
     Site            order(123,222..225,233..235,262,264,338,342)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212519"
     CDS             1..367
                     /gene="LOC107893401"
                     /coded_by="XM_016818382.2:170..1273"
                     /db_xref="GeneID:107893401"
ORIGIN      
        1 mtfplltlsp qqpfwkfrth rvianttest rnlckstlyl flalatpfia yrcfnsstmf
       61 wsssssssqp atkidadslr rqrinsskly qpdasskvpv iyssyydisf lgieklhpfd
      121 sskwgricrf lmsegylekn sivdpleast edllvvhtea ylnslknsvn varitevppv
      181 amlpnwlvqm kvlypfrrqv ggtvlaakla kdqgwainvg ggfhhcsgdr gggfcayadi
      241 slcihfafvr lnisrvmiid ldahqgnghe rdfgndervy ildmynpgiy pfdmtarnyi
      301 nqkvevmtgt ttdeylkqld kalavagsnf apelivynag tdildgdplg glkncpfndg
      361 pgewraa
//
LOCUS       XP_016673865             706 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 4, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016673865
VERSION     XP_016673865.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818376.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673865.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..706
                     /product="ATP-dependent zinc metalloprotease FTSH 4,
                     mitochondrial"
                     /calculated_mol_wt=76413
     Region          <209..645
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..706
                     /gene="LOC107893400"
                     /coded_by="XM_016818376.2:250..2370"
                     /db_xref="GeneID:107893400"
ORIGIN      
        1 mawrslisqv srqqsqlgqy rnlfskahfs gnrflsgqnr frssyavnlg rrlrdadeas
       61 eaaslreiyh rndpeavirl fesqpslhsn psalseyvka lvkvdrldes ellktlqrgi
      121 sssaveeesk sglsafqnvg kstkhgvlgt ssapihmvta eggnfkdqlw rtfrsialgf
      181 llisgvgali edrgiskglg lheevqvves ntkfndvkgv deakaeleei vhylrdpkrf
      241 trlggklpkg vllvgppgng ktmlaraiag eagvpffscs gsefeemfvg vgarrvrdlf
      301 aaakkrspci ifideidaig gsrnpkdqqy mrmtlnqllv eldgfkqneg iiliaatnfp
      361 esldkalirp grfdrriiip ypdvegrrqi leshmskvlk addvdlmiia rgtpgfsgad
      421 lanlvnvaav naamhgakev tmvdleyakd kiilgserks aviseesrkl tafheaghal
      481 vaihtegalp vhkativprg malgmvsqlp evdqtsfsrk qmlarldval ggwvaeelif
      541 genevtsgpr sdlenatela rsmvtnygms kevglvthsy nddgrslste trhliekevk
      601 yllekaynna ktiltthske hhalanalle hetltgaqin allaqvnsqq qqqeqhqevi
      661 vaqngpqsnp vppspspaas aaaaaaaaaa aataaakakg vapvgs
//
LOCUS       XP_016673866             706 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 4, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016673866
VERSION     XP_016673866.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818377.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673866.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..706
                     /product="ATP-dependent zinc metalloprotease FTSH 4,
                     mitochondrial"
                     /calculated_mol_wt=76413
     Region          <209..645
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..706
                     /gene="LOC107893400"
                     /coded_by="XM_016818377.2:250..2370"
                     /db_xref="GeneID:107893400"
ORIGIN      
        1 mawrslisqv srqqsqlgqy rnlfskahfs gnrflsgqnr frssyavnlg rrlrdadeas
       61 eaaslreiyh rndpeavirl fesqpslhsn psalseyvka lvkvdrldes ellktlqrgi
      121 sssaveeesk sglsafqnvg kstkhgvlgt ssapihmvta eggnfkdqlw rtfrsialgf
      181 llisgvgali edrgiskglg lheevqvves ntkfndvkgv deakaeleei vhylrdpkrf
      241 trlggklpkg vllvgppgng ktmlaraiag eagvpffscs gsefeemfvg vgarrvrdlf
      301 aaakkrspci ifideidaig gsrnpkdqqy mrmtlnqllv eldgfkqneg iiliaatnfp
      361 esldkalirp grfdrriiip ypdvegrrqi leshmskvlk addvdlmiia rgtpgfsgad
      421 lanlvnvaav naamhgakev tmvdleyakd kiilgserks aviseesrkl tafheaghal
      481 vaihtegalp vhkativprg malgmvsqlp evdqtsfsrk qmlarldval ggwvaeelif
      541 genevtsgpr sdlenatela rsmvtnygms kevglvthsy nddgrslste trhliekevk
      601 yllekaynna ktiltthske hhalanalle hetltgaqin allaqvnsqq qqqeqhqevi
      661 vaqngpqsnp vppspspaas aaaaaaaaaa aataaakakg vapvgs
//
LOCUS       XP_016673867             706 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 4, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016673867
VERSION     XP_016673867.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818378.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673867.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..706
                     /product="ATP-dependent zinc metalloprotease FTSH 4,
                     mitochondrial"
                     /calculated_mol_wt=76413
     Region          <209..645
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..706
                     /gene="LOC107893400"
                     /coded_by="XM_016818378.2:250..2370"
                     /db_xref="GeneID:107893400"
ORIGIN      
        1 mawrslisqv srqqsqlgqy rnlfskahfs gnrflsgqnr frssyavnlg rrlrdadeas
       61 eaaslreiyh rndpeavirl fesqpslhsn psalseyvka lvkvdrldes ellktlqrgi
      121 sssaveeesk sglsafqnvg kstkhgvlgt ssapihmvta eggnfkdqlw rtfrsialgf
      181 llisgvgali edrgiskglg lheevqvves ntkfndvkgv deakaeleei vhylrdpkrf
      241 trlggklpkg vllvgppgng ktmlaraiag eagvpffscs gsefeemfvg vgarrvrdlf
      301 aaakkrspci ifideidaig gsrnpkdqqy mrmtlnqllv eldgfkqneg iiliaatnfp
      361 esldkalirp grfdrriiip ypdvegrrqi leshmskvlk addvdlmiia rgtpgfsgad
      421 lanlvnvaav naamhgakev tmvdleyakd kiilgserks aviseesrkl tafheaghal
      481 vaihtegalp vhkativprg malgmvsqlp evdqtsfsrk qmlarldval ggwvaeelif
      541 genevtsgpr sdlenatela rsmvtnygms kevglvthsy nddgrslste trhliekevk
      601 yllekaynna ktiltthske hhalanalle hetltgaqin allaqvnsqq qqqeqhqevi
      661 vaqngpqsnp vppspspaas aaaaaaaaaa aataaakakg vapvgs
//
LOCUS       XP_016673864             587 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Gossypium
            hirsutum].
ACCESSION   XP_016673864
VERSION     XP_016673864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818375.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..587
                     /product="beta-fructofuranosidase, insoluble isoenzyme
                     CWINV6"
                     /calculated_mol_wt=66518
     Region          52..525
                     /region_name="Glyco_32"
                     /note="Glycosyl hydrolases family 32; smart00640"
                     /db_xref="CDD:214757"
     CDS             1..587
                     /gene="LOC107893399"
                     /coded_by="XM_016818375.2:219..1982"
                     /db_xref="GeneID:107893399"
ORIGIN      
        1 mdislflfvg fscfllingn kvedcdyltd ktslqsfqvl lqaeqpyrta yhfqspqnwl
       61 ndpngpmyyk gvyhlfyqyn pnsawfgdgm vwahsasydl inwfgldhal vpsepfdais
      121 cwsgsatilp gdkpvilytg idanynqvqn latpknesdp llvewvkyfg nplmtppdgv
      181 kgdnfrdptt awqgpdgtwk vvigsysnnq gmailfqsqd fvhwtmhrdp lysslktemw
      241 ecpdffpvsi nstngvdtsv enpsvrhvmk asfnshdyyt vgtyvteqer flpdadftgt
      301 sldlrfdygk fyasksffdg kknrrilcaw vnesdsmedd lkkgwsglqs iprqiwldln
      361 gkqlvqwpve elnslrgnev yvydkqlesg svfevsgita sqadieimfe lpkleeaefi
      421 dtslvdpqli cdkqdasvtg kfgpfgllal atkdlteqta iffrvfrdhk dykvlmcsdq
      481 krsslrneld kttygafidi dpqremvslr tlidhsiies fggkgrsvit trvypklaiy
      541 deahlfafnn gslsvtvsrl nawsmnkaqi taggktetis edfsrkk
//
LOCUS       XP_016675510             130 aa            linear   PLN 06-AUG-2024
DEFINITION  glutaredoxin-C6 [Gossypium hirsutum].
ACCESSION   XP_016675510
VERSION     XP_016675510.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820021.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..130
                     /product="glutaredoxin-C6"
                     /calculated_mol_wt=13589
     Region          25..130
                     /region_name="GlrX-like_plant"
                     /note="Glutaredoxin-like family; TIGR02189"
                     /db_xref="CDD:274023"
     Site            order(39,42,44,93..96,107..110)
                     /site_type="other"
                     /note="GSH binding site [chemical binding]"
                     /db_xref="CDD:239511"
     Site            order(42,45)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239511"
     CDS             1..130
                     /gene="LOC107894812"
                     /coded_by="XM_016820021.2:262..654"
                     /db_xref="GeneID:107894812"
ORIGIN      
        1 mmtttaaltg aalsfdeees mearirrlis ehpviifsrs sccmchvmkk llvtigvhpt
       61 viqlddheia slplpppppp ppttghggis srnpvpamfi ggscvggles lvalhlsghl
      121 ipklievgal
//
LOCUS       XP_016673858             380 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock factor protein HSF30 [Gossypium hirsutum].
ACCESSION   XP_016673858
VERSION     XP_016673858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..380
                     /product="heat shock factor protein HSF30"
                     /calculated_mol_wt=42649
     Region          46..139
                     /region_name="HSF"
                     /note="heat shock factor; smart00415"
                     /db_xref="CDD:214654"
     CDS             1..380
                     /gene="LOC121202805"
                     /coded_by="XM_016818369.2:218..1360"
                     /db_xref="GeneID:121202805"
ORIGIN      
        1 megvvvkeee tqmtfatavg ttagfsssss ssnvtpqpke glnevgpppf ltktfdmved
       61 pstdsvvsws earnsfivwd shkfsttllp ryfkhnnfss firqlntygf rkvdpdrwef
      121 anegflggqk qllktikrrr nivqssqhqa ggggacvelg qfgldeeler lkrdrsvlla
      181 eivrlrqhqq hskdqivame drlqstekkq qqimsflaka lrnptfirql aqnrqaqgve
      241 igrkrrltas psvenlqqea vpvvvdndqv eeqeglatie teietffnsa mddessteik
      301 dhipspmpls svtnnlgvne tlweelvhed llagepkeei vvgdqaevdv evedlaanpi
      361 dwgddlqelv dqmgylrrsk
//
LOCUS       XP_040941547             354 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA9 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941547
VERSION     XP_040941547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085613.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..354
                     /product="probable magnesium transporter NIPA9 isoform X1"
                     /calculated_mol_wt=38474
     Region          <46..113
                     /region_name="TMEM234"
                     /note="Putative transmembrane family 234; cl46810"
                     /db_xref="CDD:481150"
     CDS             1..354
                     /gene="LOC121212564"
                     /coded_by="XM_041085613.1:174..1238"
                     /db_xref="GeneID:121212564"
ORIGIN      
        1 mwesicltlv atagnnigkv lqkkgtvilp plsfklkvir tyavnkfwvi gflmdisgal
       61 lmlralslap vsviqpvsgc glailsifsh fylqevmniv dwmgitlagi gtigvgagge
      121 eqessavsil qlpwlafvvv ivfvllngwr riykrqrreq elvytlsldf kdieyevvee
      181 iiyglesgil fgmasviskm gfvfveqgfs kmliplcisi siccsgtgfy yqthglkhgr
      241 aivistcaav asivtgvlag mlalgeqlps apvarlslll gwlfimmgvi llvsstrlmr
      301 hilwplrnli pggvdrnfnl rrsgslrvkd pspsavipaa tlhhlistpa keka
//
LOCUS       XP_040941548             344 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA9 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941548
VERSION     XP_040941548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085614.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="probable magnesium transporter NIPA9 isoform X2"
                     /calculated_mol_wt=37292
     Region          <46..113
                     /region_name="TMEM234"
                     /note="Putative transmembrane family 234; cl46810"
                     /db_xref="CDD:481150"
     CDS             1..344
                     /gene="LOC121212564"
                     /coded_by="XM_041085614.1:174..1208"
                     /db_xref="GeneID:121212564"
ORIGIN      
        1 mwesicltlv atagnnigkv lqkkgtvilp plsfklkvir tyavnkfwvi gflmdisgal
       61 lmlralslap vsviqpvsgc glailsifsh fylqevmniv dwmgitlagi gtigvgagge
      121 eqessavsil qlpwlafvvv ivfvllngwr riykrqrreq elieyevvee iiyglesgil
      181 fgmasviskm gfvfveqgfs kmliplcisi siccsgtgfy yqthglkhgr aivistcaav
      241 asivtgvlag mlalgeqlps apvarlslll gwlfimmgvi llvsstrlmr hilwplrnli
      301 pggvdrnfnl rrsgslrvkd pspsavipaa tlhhlistpa keka
//
LOCUS       XP_040941549             321 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA9 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941549
VERSION     XP_040941549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085615.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="probable magnesium transporter NIPA9 isoform X3"
                     /calculated_mol_wt=34812
     CDS             1..321
                     /gene="LOC121212564"
                     /coded_by="XM_041085615.1:176..1141"
                     /db_xref="GeneID:121212564"
ORIGIN      
        1 mwesicltlv atagnnigkv lqkkgtvilp plsfklkvsv iqpvsgcgla ilsifshfyl
       61 qevmnivdwm gitlagigti gvgaggeeqe ssavsilqlp wlafvvvivf vllngwrriy
      121 krqrreqelv ytlsldfkdi eyevveeiiy glesgilfgm asviskmgfv fveqgfskml
      181 iplcisisic csgtgfyyqt hglkhgraiv istcaavasi vtgvlagmla lgeqlpsapv
      241 arlslllgwl fimmgvillv sstrlmrhil wplrnlipgg vdrnfnlrrs gslrvkdpsp
      301 savipaatlh hlistpakek a
//
LOCUS       XP_040941550             311 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA9 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941550
VERSION     XP_040941550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085616.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..311
                     /product="probable magnesium transporter NIPA9 isoform X4"
                     /calculated_mol_wt=33629
     CDS             1..311
                     /gene="LOC121212564"
                     /coded_by="XM_041085616.1:174..1109"
                     /db_xref="GeneID:121212564"
ORIGIN      
        1 mwesicltlv atagnnigkv lqkkgtvilp plsfklkvsv iqpvsgcgla ilsifshfyl
       61 qevmnivdwm gitlagigti gvgaggeeqe ssavsilqlp wlafvvvivf vllngwrriy
      121 krqrreqeli eyevveeiiy glesgilfgm asviskmgfv fveqgfskml iplcisisic
      181 csgtgfyyqt hglkhgraiv istcaavasi vtgvlagmla lgeqlpsapv arlslllgwl
      241 fimmgvillv sstrlmrhil wplrnlipgg vdrnfnlrrs gslrvkdpsp savipaatlh
      301 hlistpakek a
//
LOCUS       XP_016673856             899 aa            linear   PLN 06-AUG-2024
DEFINITION  aminopeptidase M1 [Gossypium hirsutum].
ACCESSION   XP_016673856
VERSION     XP_016673856.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673856.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..899
                     /product="aminopeptidase M1"
                     /calculated_mol_wt=102019
     Region          43..482
                     /region_name="M1_APN-Q_like"
                     /note="Peptidase M1 aminopeptidase N catalytic domain
                     family which includes aminopeptidase N (APN),
                     aminopeptidase Q (APQ), tricorn interacting factor F3, and
                     endoplasmic reticulum aminopeptidase 1 (ERAP1); cd09601"
                     /db_xref="CDD:341064"
     Site            order(162,164,298..301,334..335,338,357,361,415,420)
                     /site_type="active"
                     /db_xref="CDD:341064"
     Region          558..873
                     /region_name="ERAP1_C"
                     /note="ERAP1-like C-terminal domain; pfam11838"
                     /db_xref="CDD:463368"
     CDS             1..899
                     /gene="LOC107893393"
                     /coded_by="XM_016818367.2:233..2932"
                     /db_xref="GeneID:107893393"
ORIGIN      
        1 mnllkkccsc frkktegapt stsdpttdfk gqprlptfav pkrydiqlkp dlaackfegi
       61 vsivvdivad trfivlnaaa qlhinsdsvy fsdpnsnkvf ekpkvgqvqa deilvlefse
      121 tlpkgmgvlt igfegvlnek mkgfyistyd hngekknmev tqfepayarq cfpcwdepsf
      181 kakfnitlld vpselvtlsn mpvdeeelng nlktvyyqes pvmstylvav viglfdyied
      241 htpdgikvrv ysqvgkanqg kfalhvalqt lgfykdyfqm pyslpkldmv aipdfaagam
      301 enyglvtyre ndllfddhhs aaankqrist vvahelahqw fgnlvtmeww tdlwlkegfa
      361 twmsymakdk lfpewkiwtq ffdhessegl rldglaeshp ievevnhase ideifdtisy
      421 kkgasiiqml kgyvggphfq nslatyikrh awsnartndl wavlkeecne ptmdkimnsw
      481 tkqegypvls vkmknqtlei kqsrflyags rdrcqwiipi tyccgdydsl isllmekkse
      541 tyeikdllsn itdparswik lnveqigffr vkyddglaak lryaieqkcl svtdrlgild
      601 dsfalcmare msltslltfm aayreeleht vlsnlikiid kierivadar pklmnyikqf
      661 figlllhaaa nfgwdpkqge shldamsrgd iftalavlgh eetineansr fnaflndrnt
      721 pllhpdirka ayvavmqkvt ssnkaglesl lkvyretdis qekirilgsl ascpdesvvy
      781 ealnfalsse vrkqdaifgl avskegreva wkwlknnwdk iwttygsgil ltrfvgpivs
      841 sfassekmke igtflgrtea skvrtlkqsm eqiyinskwv qtirddkdla eavkklank
//
LOCUS       XP_016673855             331 aa            linear   PLN 06-AUG-2024
DEFINITION  solute carrier family 25 member 44 [Gossypium hirsutum].
ACCESSION   XP_016673855
VERSION     XP_016673855.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673855.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..331
                     /product="solute carrier family 25 member 44"
                     /calculated_mol_wt=35518
     Region          32..107
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          140..217
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          238..321
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..331
                     /gene="LOC107893391"
                     /coded_by="XM_016818366.2:352..1347"
                     /db_xref="GeneID:107893391"
ORIGIN      
        1 mklsaseddl gsdihvpadi dwhmldkskf fflgaaffsg asaglypamv lktrqqvsst
       61 qiscfkmsfs imrceglrgf yrgfgttlmg tiparalymg alevtktsvg sstvrlgfsd
      121 ttataiasaa aglssamaaq lvwtpidvvs qrlmvqapna spcrykngld afrkilfadg
      181 lkglyrgfgi smltyapsna vwwasysvan rliygglgws dnirrseska tavavqglsa
      241 amasgvsali ttpldtiktr lqvldkeeng vrkpltmlqt vrnlvkesgl aacyrglgpr
      301 wasmslsatt mittyellkr lsaknqeslt s
//
LOCUS       XP_016673854             515 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin dehydrogenase 7 [Gossypium hirsutum].
ACCESSION   XP_016673854
VERSION     XP_016673854.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..515
                     /product="cytokinin dehydrogenase 7"
                     /calculated_mol_wt=57316
     Region          1..510
                     /region_name="PLN02441"
                     /note="cytokinin dehydrogenase"
                     /db_xref="CDD:215242"
     CDS             1..515
                     /gene="LOC107893390"
                     /coded_by="XM_016818365.2:329..1876"
                     /db_xref="GeneID:107893390"
ORIGIN      
        1 mivclgrivq dtdadsipdd dvstlsesld lqgtiesggi tgvagkdfgg lysvkplali
       61 kpsgtediar vvkaasqtsh ltvaargngh singqamadg gfvidmrste enhfkpltid
      121 gshyidvsgg alwedvlrrc vsmfrlaprs wtdylsltvg gtlsnagvsg qafrfgpqts
      181 nvtelevvtg kgeitvcsat qnselffgal gglgqlgiit rarvklqpap dmvrwlrvvy
      241 tefeeftrda eflvtqeege sfdyvegfvf snsddpingw psvpldpdhe fnpayipqta
      301 ssvlycleva lhyrnsdrps tvdtavsrll erlgfiqrlk fqlnvsyvef llrvkqveeh
      361 akangnwdsp hpwlnifisk ssivdfdrtv frkmlkdgvg gpmliypllr skwdsrtsvv
      421 lpegeifyiv allrfvpkgp tveklvaqnh eiikwcnkeg ldfklylphy qskedwkrhf
      481 gnqwtrfver ktsfdpmail apgqkifkrt htikp
//
LOCUS       XP_016673853             139 aa            linear   PLN 06-AUG-2024
DEFINITION  copper transporter 5.1 [Gossypium hirsutum].
ACCESSION   XP_016673853
VERSION     XP_016673853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="copper transporter 5.1"
                     /calculated_mol_wt=15309
     Region          4..121
                     /region_name="Ctr"
                     /note="Ctr copper transporter family; pfam04145"
                     /db_xref="CDD:461194"
     CDS             1..139
                     /gene="LOC107893389"
                     /coded_by="XM_016818364.2:158..577"
                     /db_xref="GeneID:107893389"
ORIGIN      
        1 mmhmtfywsr qvtllftswr tdswpsyalt llacflasaf ypyleyvryr vrrggkptdw
       61 tteepfllrs rgagmvgkia ggllfglssa lgyllmlavm sfnggvflav ilgltvgylv
      121 frgedddqta glnstcaca
//
LOCUS       XP_016673852             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673852
VERSION     XP_016673852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818363.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15660
     Region          18..109
                     /region_name="DUF1677"
                     /note="Protein of unknown function (DUF1677); pfam07911"
                     /db_xref="CDD:462314"
     CDS             1..139
                     /gene="LOC107893388"
                     /coded_by="XM_016818363.2:398..817"
                     /db_xref="GeneID:107893388"
ORIGIN      
        1 matnimepfk nknnqievef aecdccglte ectpayisrv rekfegrwlc glcseavkde
       61 rirssspedi tinealarhm kfceqfksss ppanptedli aamrhlilrs ldsprknnng
      121 sssfvrsktc fsrfsdger
//
LOCUS       XP_040941551             575 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 7 [Gossypium
            hirsutum].
ACCESSION   XP_040941551
VERSION     XP_040941551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085617.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..575
                     /product="polyadenylate-binding protein-interacting
                     protein 7"
                     /calculated_mol_wt=62540
     Region          226..267
                     /region_name="CUE_CID7_like"
                     /note="CUE domain found in CTC-interacting domain proteins
                     CID5, CID6, CID7 and similar proteins; cd14371"
                     /db_xref="CDD:270554"
     Region          418..479
                     /region_name="DUF1771"
                     /note="Domain of unknown function (DUF1771); pfam08590"
                     /db_xref="CDD:462528"
     Region          493..575
                     /region_name="SMR"
                     /note="Small MutS-related domain; cl46904"
                     /db_xref="CDD:481244"
     CDS             1..575
                     /gene="LOC121212565"
                     /coded_by="XM_041085617.1:351..2078"
                     /db_xref="GeneID:121212565"
ORIGIN      
        1 mslskkgiqi sdtklntpsk vttlnpnaae fvpfslrsps ssgstiaada trfaisrtlg
       61 kavvdrsess isnnsddeah qfwrrqlpdd itpdfkvine ddsqgigtgs lslaglslhg
      121 dseasrfpas agggyifgnq qqllhhngng sniaeklrhp assygknpta asflplqakp
      181 wdkqlvnsdq lltnrregqp ysgnsrhrfv ndllgeqtim dgpemnpvef lasqfpglaa
      241 gslaevyfan gcdlnltiem ltqhelqvdg gfnqnlnskt llapnlstlg fpvtlsddqs
      301 gatkyagddl qlnvdpylss dkdnilifks nsslpsrgai dfvpgirkma sqdsgvwkyd
      361 rngsanstvg ssrsshglan tfslaagrgv yanrlqtrvh sdpawletgd avanlypelr
      421 edaqdharsr nayfdqarqg fltgnkaltk elsvkgqlqn mhmkathgnt qeslfrqrnq
      481 vppeivggqe riidlhglpv seaihmlnye lsvlrrtara adqrlqvyis vgtgnhargs
      541 riparlpvai qhylleeecl dftepqpgll rvviy
//
LOCUS       XP_040941552             131 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941552
VERSION     XP_040941552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085618.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..131
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14205
     Region          <9..99
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     CDS             1..131
                     /gene="LOC121212567"
                     /coded_by="XM_041085618.1:120..515"
                     /db_xref="GeneID:121212567"
ORIGIN      
        1 mgmfkasktt lhenisssfv aealagleai klvtsmslss viikgdsktv ikkcksqkvd
       61 ksvlgaiipd iqgkrvsfqd vifqfiprse nvqannlakg alekreasyl grkgrshsat
      121 dpegrwreep d
//
LOCUS       XP_016673847             399 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box only protein 13 [Gossypium hirsutum].
ACCESSION   XP_016673847
VERSION     XP_016673847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="F-box only protein 13"
                     /calculated_mol_wt=44719
     Region          21..59
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(23,27,30..31,34..35,39,41..42,46..48,50)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          290..>374
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          328..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..399
                     /gene="LOC107893384"
                     /coded_by="XM_016818358.2:387..1586"
                     /db_xref="GeneID:107893384"
ORIGIN      
        1 meigngcisk krklveegsl delnedller vlswlptstl frlgsvckrw ksmadsqsfk
       61 lacsripsrd pwfymvdadl nrsivfdsak sswkrlnhps lllrdhnrds ipvaasgglv
      121 cfrnmsggyi vcnpvtgscr elppvdpgqs llaiamnays nyhgsyklvl vsgdlpklsf
      181 kvynsitncw eeeimlrrna ddctksndnd ddavyflsta gnvvvtnmqr spskqyssvf
      241 tlkdgeeivy fltssgrvia cnltqkcfse yprllpvfse ysidvveckg emlvvvlsef
      301 fesaslrvwq cdpktktwnq iaamppamsh efydkkldin cvgagdqifi clssaelcsy
      361 vlynfvtnrw velpecsvng eslefmsals feprieasv
//
LOCUS       XP_016673849             399 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box only protein 13 [Gossypium hirsutum].
ACCESSION   XP_016673849
VERSION     XP_016673849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="F-box only protein 13"
                     /calculated_mol_wt=44719
     Region          21..59
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(23,27,30..31,34..35,39,41..42,46..48,50)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          290..>374
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          328..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..399
                     /gene="LOC107893384"
                     /coded_by="XM_016818360.2:195..1394"
                     /db_xref="GeneID:107893384"
ORIGIN      
        1 meigngcisk krklveegsl delnedller vlswlptstl frlgsvckrw ksmadsqsfk
       61 lacsripsrd pwfymvdadl nrsivfdsak sswkrlnhps lllrdhnrds ipvaasgglv
      121 cfrnmsggyi vcnpvtgscr elppvdpgqs llaiamnays nyhgsyklvl vsgdlpklsf
      181 kvynsitncw eeeimlrrna ddctksndnd ddavyflsta gnvvvtnmqr spskqyssvf
      241 tlkdgeeivy fltssgrvia cnltqkcfse yprllpvfse ysidvveckg emlvvvlsef
      301 fesaslrvwq cdpktktwnq iaamppamsh efydkkldin cvgagdqifi clssaelcsy
      361 vlynfvtnrw velpecsvng eslefmsals feprieasv
//
LOCUS       XP_040941553             399 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box only protein 13 [Gossypium hirsutum].
ACCESSION   XP_040941553
VERSION     XP_040941553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085619.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..399
                     /product="F-box only protein 13"
                     /calculated_mol_wt=44719
     Region          21..59
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(23,27,30..31,34..35,39,41..42,46..48,50)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          290..>374
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          328..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..399
                     /gene="LOC107893384"
                     /coded_by="XM_041085619.1:256..1455"
                     /db_xref="GeneID:107893384"
ORIGIN      
        1 meigngcisk krklveegsl delnedller vlswlptstl frlgsvckrw ksmadsqsfk
       61 lacsripsrd pwfymvdadl nrsivfdsak sswkrlnhps lllrdhnrds ipvaasgglv
      121 cfrnmsggyi vcnpvtgscr elppvdpgqs llaiamnays nyhgsyklvl vsgdlpklsf
      181 kvynsitncw eeeimlrrna ddctksndnd ddavyflsta gnvvvtnmqr spskqyssvf
      241 tlkdgeeivy fltssgrvia cnltqkcfse yprllpvfse ysidvveckg emlvvvlsef
      301 fesaslrvwq cdpktktwnq iaamppamsh efydkkldin cvgagdqifi clssaelcsy
      361 vlynfvtnrw velpecsvng eslefmsals feprieasv
//
LOCUS       XP_040941554             783 aa            linear   PLN 06-AUG-2024
DEFINITION  conserved oligomeric Golgi complex subunit 3 [Gossypium hirsutum].
ACCESSION   XP_040941554
VERSION     XP_040941554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085620.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..783
                     /product="conserved oligomeric Golgi complex subunit 3"
                     /calculated_mol_wt=88594
     Region          117..261
                     /region_name="Sec34"
                     /note="Sec34-like family; pfam04136"
                     /db_xref="CDD:461190"
     CDS             1..783
                     /gene="LOC121212568"
                     /coded_by="XM_041085620.1:128..2479"
                     /db_xref="GeneID:121212568"
ORIGIN      
        1 matnpataps klpksgaisk gynfastweq naplteqqqr aiqmlshava erpfpanlaq
       61 ertsgqdkgl svstkddnfr dseaideilv nsnqfykwft dlesalrset eekyqhyvdt
      121 lvdriqtcdd ilrqvdetld lfnelqlqhq avetktkslh dacnrlvmek qrliefaeal
      181 rsklkyfdel enitsnfysp nmnvgnanfl pllkrldeci lyvennpqya essvyllkfr
      241 qlqsralgmi rshvvsvlks assqvqaaiw ssggnkesls egveasiiyv rfkaaaselk
      301 pileeieska srkeyvylla echklyceqr lslikgtvhq risefakkeg lpsltrsgca
      361 ylmqvcqleh qlfhhffpss sedvsslapl idplstylyd tlrpklihea nvdflcemvd
      421 ilkaevlgeq lsrkseslag lrpslerila diherltfra rtyirdeian yipinedldy
      481 ptklehsvdv vsvtatnanp dvfktwyppl ektisflskl yrslepavft glaqeavevc
      541 svsiqkaskl vakrstpmdg qlflikhlli lreqiapfdi efsvtdkeld fshllenlrr
      601 ilrgqtslfd wsgstslart lsprvlesqv dakkelekil katceefima vtkqvvdpml
      661 sfvtkvtavk valssgtqnq krdsvmakpl keqafatpea vaelvqkvhs aiqrelpvvi
      721 akmklylqnp strtilfkpi ktniveahiq iqsllkaeys peekrtinmv sieelesqld
      781 nll
//
LOCUS       XP_040941555             487 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase 5 [Gossypium hirsutum].
ACCESSION   XP_040941555
VERSION     XP_040941555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085621.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..487
                     /product="glucan endo-1,3-beta-glucosidase 5"
                     /calculated_mol_wt=52861
     Region          24..342
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          361..446
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..487
                     /gene="LOC121212569"
                     /coded_by="XM_041085621.1:224..1687"
                     /db_xref="GeneID:121212569"
ORIGIN      
        1 mgeirlfwll fvwvlgierg vsglacnwgl qsthplppni vvkllkdngf dkvklfeadp
       61 galkalgksg iqvmvgipnd mlaslagsag naeawvqqnv snyvskygtd irvvaignep
      121 flhsykdmft qttlpalqni qaalakaglg kkvkttvpln advyqtdsgl psggdfrpdv
      181 rdlmlkiikf iqdnggilti niypflslqa dpnfpkefaf fdnkanpvvd gpivytnvyd
      241 anfdtlisal ekngfgqmpv vigevgwptd cdpnanidna rrfnqglldr iirgqgtpkr
      301 rappdvyifs lidednksve pgnferhwgi fnydgsikyp ldlgkgkala pakgvkylar
      361 qwcvlspsag vsdpnalaqs isqacqyadc tsigpgsscs nldpqrnasy afnmyyqtmd
      421 qrkdacsfnn lstvttvdps qppcrfeimi digkhelsls nkvpaagfgs lllvslmlvl
      481 glangvh
//
LOCUS       XP_040941556             484 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941556
VERSION     XP_040941556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085622.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52188
     Region          169..235
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          277..478
                     /region_name="SYLF_FYVE"
                     /note="The SYLF domain (also called DUF500), a novel
                     lipid-binding module, of FYVE zinc finger domain
                     containing proteins; cd11526"
                     /db_xref="CDD:211402"
     Site            277..290
                     /site_type="other"
                     /note="putative amphipathic alpha helix"
                     /db_xref="CDD:211402"
     CDS             1..484
                     /gene="LOC107893380"
                     /coded_by="XM_041085622.1:268..1722"
                     /db_xref="GeneID:107893380"
ORIGIN      
        1 marfegrvsy sslsevekek nnnayqfddd yidsdwtvpe dksivslgsk sikkgnpyqf
       61 padsdefidg gydssddvrv smrnglepev nlknvlsgli aivtgtnkgs psvsvnqqcq
      121 ssnvsflgsg nngdtclqss vyipsapplm epsginynay kevleaeppe wlpdssttvc
      181 mqcsslftai trgrhhcrfc ggifcracsk grcllpvkfr drnpqrvcds cydrldplqg
      241 vlinsisnaa qvakhdvmdw tctrgwlnlp vglsmeheiy kasttlrsyc qvaqsspeks
      301 iplavlkgak glailtvvka gvllayklgt glviarrsdg twsapsaifs vglgwgaqig
      361 gelmdfiivl hdlqavktfc srmhfslgag csaaagpmgr vleadlragd rgsgmcytys
      421 cskgafvgvs legnivatrm dtnlrfygdp yltstdillg tvsrpkaaep lyvalddlys
      481 slnc
//
LOCUS       XP_016673845             484 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673845
VERSION     XP_016673845.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673845.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52188
     Region          169..235
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          277..478
                     /region_name="SYLF_FYVE"
                     /note="The SYLF domain (also called DUF500), a novel
                     lipid-binding module, of FYVE zinc finger domain
                     containing proteins; cd11526"
                     /db_xref="CDD:211402"
     Site            277..290
                     /site_type="other"
                     /note="putative amphipathic alpha helix"
                     /db_xref="CDD:211402"
     CDS             1..484
                     /gene="LOC107893380"
                     /coded_by="XM_016818356.2:180..1634"
                     /db_xref="GeneID:107893380"
ORIGIN      
        1 marfegrvsy sslsevekek nnnayqfddd yidsdwtvpe dksivslgsk sikkgnpyqf
       61 padsdefidg gydssddvrv smrnglepev nlknvlsgli aivtgtnkgs psvsvnqqcq
      121 ssnvsflgsg nngdtclqss vyipsapplm epsginynay kevleaeppe wlpdssttvc
      181 mqcsslftai trgrhhcrfc ggifcracsk grcllpvkfr drnpqrvcds cydrldplqg
      241 vlinsisnaa qvakhdvmdw tctrgwlnlp vglsmeheiy kasttlrsyc qvaqsspeks
      301 iplavlkgak glailtvvka gvllayklgt glviarrsdg twsapsaifs vglgwgaqig
      361 gelmdfiivl hdlqavktfc srmhfslgag csaaagpmgr vleadlragd rgsgmcytys
      421 cskgafvgvs legnivatrm dtnlrfygdp yltstdillg tvsrpkaaep lyvalddlys
      481 slnc
//
LOCUS       XP_040941557             484 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941557
VERSION     XP_040941557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085623.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52188
     Region          169..235
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          277..478
                     /region_name="SYLF_FYVE"
                     /note="The SYLF domain (also called DUF500), a novel
                     lipid-binding module, of FYVE zinc finger domain
                     containing proteins; cd11526"
                     /db_xref="CDD:211402"
     Site            277..290
                     /site_type="other"
                     /note="putative amphipathic alpha helix"
                     /db_xref="CDD:211402"
     CDS             1..484
                     /gene="LOC107893380"
                     /coded_by="XM_041085623.1:213..1667"
                     /db_xref="GeneID:107893380"
ORIGIN      
        1 marfegrvsy sslsevekek nnnayqfddd yidsdwtvpe dksivslgsk sikkgnpyqf
       61 padsdefidg gydssddvrv smrnglepev nlknvlsgli aivtgtnkgs psvsvnqqcq
      121 ssnvsflgsg nngdtclqss vyipsapplm epsginynay kevleaeppe wlpdssttvc
      181 mqcsslftai trgrhhcrfc ggifcracsk grcllpvkfr drnpqrvcds cydrldplqg
      241 vlinsisnaa qvakhdvmdw tctrgwlnlp vglsmeheiy kasttlrsyc qvaqsspeks
      301 iplavlkgak glailtvvka gvllayklgt glviarrsdg twsapsaifs vglgwgaqig
      361 gelmdfiivl hdlqavktfc srmhfslgag csaaagpmgr vleadlragd rgsgmcytys
      421 cskgafvgvs legnivatrm dtnlrfygdp yltstdillg tvsrpkaaep lyvalddlys
      481 slnc
//
LOCUS       XP_040941558             484 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941558
VERSION     XP_040941558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085624.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52188
     Region          169..235
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          277..478
                     /region_name="SYLF_FYVE"
                     /note="The SYLF domain (also called DUF500), a novel
                     lipid-binding module, of FYVE zinc finger domain
                     containing proteins; cd11526"
                     /db_xref="CDD:211402"
     Site            277..290
                     /site_type="other"
                     /note="putative amphipathic alpha helix"
                     /db_xref="CDD:211402"
     CDS             1..484
                     /gene="LOC107893380"
                     /coded_by="XM_041085624.1:233..1687"
                     /db_xref="GeneID:107893380"
ORIGIN      
        1 marfegrvsy sslsevekek nnnayqfddd yidsdwtvpe dksivslgsk sikkgnpyqf
       61 padsdefidg gydssddvrv smrnglepev nlknvlsgli aivtgtnkgs psvsvnqqcq
      121 ssnvsflgsg nngdtclqss vyipsapplm epsginynay kevleaeppe wlpdssttvc
      181 mqcsslftai trgrhhcrfc ggifcracsk grcllpvkfr drnpqrvcds cydrldplqg
      241 vlinsisnaa qvakhdvmdw tctrgwlnlp vglsmeheiy kasttlrsyc qvaqsspeks
      301 iplavlkgak glailtvvka gvllayklgt glviarrsdg twsapsaifs vglgwgaqig
      361 gelmdfiivl hdlqavktfc srmhfslgag csaaagpmgr vleadlragd rgsgmcytys
      421 cskgafvgvs legnivatrm dtnlrfygdp yltstdillg tvsrpkaaep lyvalddlys
      481 slnc
//
LOCUS       XP_040941559             341 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941559
VERSION     XP_040941559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085625.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..341
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38623
     Region          24..70
                     /region_name="Retrotran_gag_3"
                     /note="gag-polypeptide of LTR copia-type; pfam14244"
                     /db_xref="CDD:464114"
     CDS             1..341
                     /gene="LOC121212570"
                     /coded_by="XM_041085625.1:470..1495"
                     /db_xref="GeneID:121212570"
ORIGIN      
        1 msetpsptse itsnsenfsg sdapsdssgl titchrlngn nflewsqsvk ifllsrerld
       61 yatgeikkpa vidagfakwm rgngqvmtwl lnsmtpsisr nfllyttaae iwsavretys
      121 stdniaelyh vedqaatlkq gtmpvtlyyn tltalwqqld lyahydwvdp rdvalyqqiv
      181 tqrrlfqflq glnkdldevr grvlaisplp slreafsmvk keesrrcvml sdepystser
      241 sallthqssp sskrgrpwcd hckkpghske kcwklhgkpq dwkskhsrdn ksslfvatsv
      301 tsftkeqiae lqklfgkfqg scegnlvikd pegteleedd w
//
LOCUS       XP_016673843             828 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoinositide phosphatase SAC3 [Gossypium hirsutum].
ACCESSION   XP_016673843
VERSION     XP_016673843.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673843.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..828
                     /product="phosphoinositide phosphatase SAC3"
                     /calculated_mol_wt=94031
     Region          103..400
                     /region_name="Syja_N"
                     /note="SacI homology domain; pfam02383"
                     /db_xref="CDD:460545"
     CDS             1..828
                     /gene="LOC107893377"
                     /coded_by="XM_016818354.2:677..3163"
                     /db_xref="GeneID:107893377"
ORIGIN      
        1 mepiaaenns dninnkessf qfqtstymqk frlyetlsnf ymigrnksrt ywrvlkidrl
       61 dpselnired stiytesecs ellrrvhdgn istgglkfvt tcygivgfik flgpyymlli
      121 tkrrrigvic ghnvyavlks emiplpnstv nlsindknei rykkllcsvd ltkdfffsys
      181 yhvmrslqkn lcnndpdqvi yetmfvwnef ltqgirkhlk ntlwtvalvy gffkqttlsv
      241 sgrdlklili arrsrhyagt rylkrgvnek grvandvete qivfedvsdg lptqitsivq
      301 nrgsiplfws qetsrlnikp diilskkdqn yeatrlhfen lverygnpii ilnliktqek
      361 kpresilrqe fahvidfink dmseetclrf lhwdlhkhfr sqatnvllll gkvaayaltl
      421 tgffycrvts tlrpdectaw psseniddgd msppkycdnv negadrlegn hsgdnntang
      481 nhsvkpptfq rgvlrtncid cldrtnvaqy ayglaalgyq lntlgvkdtp kidlddplad
      541 elmvfyermg dtlahqysgs aahnkvfser rgqwraatqs qeffrtlqry ysnaymdaqk
      601 qdainlflgn fqpqpgkpal weldsnqhyg sffprslsdg nilrqsespm sarndkqekl
      661 tnstlpnrsq gasnghsess peistcgrki sysrytpsmp qrqlfgqvqi drslgsdnvc
      721 sehgdgfscs nfvdidwlss agnscdgepf erslvltssl vdgrssenvv ngilgettps
      781 tcengssmke tqqkatelsf admpnsnipe qfsdsfvqwv nggqmlch
//
LOCUS       XP_040941560             828 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoinositide phosphatase SAC3 [Gossypium hirsutum].
ACCESSION   XP_040941560
VERSION     XP_040941560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085626.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..828
                     /product="phosphoinositide phosphatase SAC3"
                     /calculated_mol_wt=94031
     Region          103..400
                     /region_name="Syja_N"
                     /note="SacI homology domain; pfam02383"
                     /db_xref="CDD:460545"
     CDS             1..828
                     /gene="LOC107893377"
                     /coded_by="XM_041085626.1:257..2743"
                     /db_xref="GeneID:107893377"
ORIGIN      
        1 mepiaaenns dninnkessf qfqtstymqk frlyetlsnf ymigrnksrt ywrvlkidrl
       61 dpselnired stiytesecs ellrrvhdgn istgglkfvt tcygivgfik flgpyymlli
      121 tkrrrigvic ghnvyavlks emiplpnstv nlsindknei rykkllcsvd ltkdfffsys
      181 yhvmrslqkn lcnndpdqvi yetmfvwnef ltqgirkhlk ntlwtvalvy gffkqttlsv
      241 sgrdlklili arrsrhyagt rylkrgvnek grvandvete qivfedvsdg lptqitsivq
      301 nrgsiplfws qetsrlnikp diilskkdqn yeatrlhfen lverygnpii ilnliktqek
      361 kpresilrqe fahvidfink dmseetclrf lhwdlhkhfr sqatnvllll gkvaayaltl
      421 tgffycrvts tlrpdectaw psseniddgd msppkycdnv negadrlegn hsgdnntang
      481 nhsvkpptfq rgvlrtncid cldrtnvaqy ayglaalgyq lntlgvkdtp kidlddplad
      541 elmvfyermg dtlahqysgs aahnkvfser rgqwraatqs qeffrtlqry ysnaymdaqk
      601 qdainlflgn fqpqpgkpal weldsnqhyg sffprslsdg nilrqsespm sarndkqekl
      661 tnstlpnrsq gasnghsess peistcgrki sysrytpsmp qrqlfgqvqi drslgsdnvc
      721 sehgdgfscs nfvdidwlss agnscdgepf erslvltssl vdgrssenvv ngilgettps
      781 tcengssmke tqqkatelsf admpnsnipe qfsdsfvqwv nggqmlch
//
LOCUS       XP_016673841             947 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016673841
VERSION     XP_016673841.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818352.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673841.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..947
                     /product="kinesin-like protein KIN-7B isoform X1"
                     /calculated_mol_wt=106711
     Region          31..350
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(38,114,117,119..122,253)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(303,306,309)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          765..929
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..947
                     /gene="LOC107893376"
                     /coded_by="XM_016818352.2:268..3111"
                     /db_xref="GeneID:107893376"
ORIGIN      
        1 mvgtpatplc kvqrtpamtp gggpkvreer ilvtvrmrpl nqreqamydl iawdcvddht
       61 ivfknpnher panqysfdrv fdpssttrkv yedgakdval saltginati faygqtssgk
      121 tftmrgiten avkdiyehik ntqerdfvlk lsameiynet vvdllnrdsg slrllddpek
      181 gtiveklvee vvkdsqhlkh ligiceaqrq vgetalndks srshqiirlt iesslrente
      241 cvksflasln lvdlagserv sqtnadgvrl kegshinrsl ltlttvirkl ssggkksghi
      301 pyrdskltri lqnslggnar taiictispa lshveqtrnt ltfatsakev innahvnmii
      361 sdkrlvkhlq kevarleakl rspeptsasc lqsllmekel kiqemereme elkrqrdiah
      421 sqleqerkar kvqkglnqrg psskgvrcls fdsepvpgsp darprktvgr ystlrksats
      481 tdpsmlvhei rkleqrqrql geeanralev lhkevsshrl gnketaeaia kmlfeikdmq
      541 aissipedvm ignganlkee itrlnsqgct ieslekklen vqksidilvs sisngeetpe
      601 fktqlkkkki lpftlknstn mqniirapcs plssshkime qdienkaped nenvssrshk
      661 spgsfktpps kadarqvssr egapatkqtn svdvkkmqrm fknaaeenir sirsyvtelk
      721 ervaklqyqk qllvcqvlel eeakesgtdd aesglqspmp whmvfedqrk qivmlwhlch
      781 vsiihrtqfy llfrgdpadq iymevelrrl twleqqfael gnaspallgd epaglvassi
      841 kalkqereyl akrvsskltv eerellylkw dvpavgkqrr lqlvnklwtd plnmqhvqes
      901 aelvaklvgf cesgehlske mfelnfvtps dkkswmgwnl isnllhl
//
LOCUS       XP_016673842             946 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016673842
VERSION     XP_016673842.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818353.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673842.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..946
                     /product="kinesin-like protein KIN-7B isoform X2"
                     /calculated_mol_wt=106624
     Region          31..349
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(38,114,117,119..122,253)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          764..928
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..946
                     /gene="LOC107893376"
                     /coded_by="XM_016818353.2:268..3108"
                     /db_xref="GeneID:107893376"
ORIGIN      
        1 mvgtpatplc kvqrtpamtp gggpkvreer ilvtvrmrpl nqreqamydl iawdcvddht
       61 ivfknpnher panqysfdrv fdpssttrkv yedgakdval saltginati faygqtssgk
      121 tftmrgiten avkdiyehik ntqerdfvlk lsameiynet vvdllnrdsg slrllddpek
      181 gtiveklvee vvkdsqhlkh ligiceaqrq vgetalndks srshqiirlt iesslrente
      241 cvksflasln lvdlagserv sqtnadgvrl kegshinrsl ltlttvirkl sggkksghip
      301 yrdskltril qnslggnart aiictispal shveqtrntl tfatsakevi nnahvnmiis
      361 dkrlvkhlqk evarleaklr speptsascl qsllmekelk iqemeremee lkrqrdiahs
      421 qleqerkark vqkglnqrgp sskgvrclsf dsepvpgspd arprktvgry stlrksatst
      481 dpsmlvheir kleqrqrqlg eeanralevl hkevsshrlg nketaeaiak mlfeikdmqa
      541 issipedvmi gnganlkeei trlnsqgcti eslekklenv qksidilvss isngeetpef
      601 ktqlkkkkil pftlknstnm qniirapcsp lssshkimeq dienkapedn envssrshks
      661 pgsfktppsk adarqvssre gapatkqtns vdvkkmqrmf knaaeenirs irsyvtelke
      721 rvaklqyqkq llvcqvlele eakesgtdda esglqspmpw hmvfedqrkq ivmlwhlchv
      781 siihrtqfyl lfrgdpadqi ymevelrrlt wleqqfaelg naspallgde paglvassik
      841 alkqereyla krvsskltve erellylkwd vpavgkqrrl qlvnklwtdp lnmqhvqesa
      901 elvaklvgfc esgehlskem felnfvtpsd kkswmgwnli snllhl
//
LOCUS       XP_040941561             806 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose synthase [Gossypium hirsutum].
ACCESSION   XP_040941561
VERSION     XP_040941561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085627.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..806
                     /product="sucrose synthase"
                     /calculated_mol_wt=92660
     Region          1..806
                     /region_name="PLN00142"
                     /note="sucrose synthase"
                     /db_xref="CDD:215073"
     CDS             1..806
                     /gene="LOC121212571"
                     /coded_by="XM_041085627.1:164..2584"
                     /db_xref="GeneID:121212571"
ORIGIN      
        1 maeraltrvh slrerldstl tahrneilal lsriegkgkg illhhqiile feaipeenrk
       61 kladgaffei lkasqeaivl ppwvalavrp rpgvweyirv nvhalvveel tvaeylrfke
      121 elvdgssnan fvleldfepf nasfprptls ksigngvefl nrhlsaklfh dkesmhplle
      181 flkvhchkgk nmmlndriqn lnslqhvlrk aeeylvalpa etpyaefehk fqeiglergw
      241 gdtaervlem iqllldllea pdpctlekfl gripmvfnvv iltphgyfaq dnvlgypdtg
      301 gqvvyildqv ralenemlnr ikqqglnitp riliitrllp davgttcgqr lekvygteys
      361 dilripfrte kgivrrwisr fevwpylety tedvaheisk elqgkpdlii gnysdgniva
      421 sllahklgvt qctiahalek tkypdsdiyw kkledkyhfs cqftadlfam nhtdfiitst
      481 fqeiagskdt vgqyeshtaf tlpglyrvvh gidvfdpkfn ivspgadmsi yypyteekkr
      541 lkhfhseiee llyskvenee hwcvlndrnk pilftmarld rvknltglve wygknaklre
      601 lvnlvvvggd rrkeskdlee kaemkkmfel iekyklngqf rwissqmnrv rngelyryic
      661 dtkgafvqpa lyeafgltvv eamtcglptf atcnggpaei ivhgksgfni dpyhgdqaae
      721 ilvdffekck tdpsywtkis egglkrieek ytwkiyserl ltltgvygfw khvsnldrle
      781 srrylemfya lkyrklaesv plavee
//
LOCUS       XP_016673838             124 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR76 [Gossypium hirsutum].
ACCESSION   XP_016673838
VERSION     XP_016673838.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818349.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="auxin-responsive protein SAUR76"
                     /calculated_mol_wt=13764
     Region          11..103
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..124
                     /gene="LOC107893373"
                     /coded_by="XM_016818349.2:93..467"
                     /db_xref="GeneID:107893373"
ORIGIN      
        1 makgsnkltk llsvlkklns fnskqsrtpt staavaasdi iyneessadl hpvyvgksrr
       61 rylissdiid nplfrelaer sgedddavin vscevvlfeh llwmlenadp qpesleelve
      121 fyac
//
LOCUS       XP_016675509             214 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF017 [Gossypium
            hirsutum].
ACCESSION   XP_016675509
VERSION     XP_016675509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820020.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..214
                     /product="ethylene-responsive transcription factor ERF017"
                     /calculated_mol_wt=23814
     Region          35..97
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(37..38,40,42,44,46,50,52,59,61,64)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..214
                     /gene="LOC107894810"
                     /coded_by="XM_016820020.2:129..773"
                     /db_xref="GeneID:107894810"
ORIGIN      
        1 mslhtphhhy ynflhsktmv klsnekprge rndsqfkgvr krkwgkwvse irlpnsreri
       61 wlgsydtadk aarafdaavf clrgpsakfn fphnppdiaf rksltpseiq tfaarfanse
      121 ppttihseqs msscgtesps psvrlewetp vvgsftdglt mdagnygldy gifpgfddfs
      181 sdvvigssvg niageeeedn vdgilvsesf lwdf
//
LOCUS       XP_016673832             753 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673832
VERSION     XP_016673832.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673832.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..753
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=83925
     Region          331..497
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(331,400,430)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..753
                     /gene="LOC107893371"
                     /coded_by="XM_016818343.2:166..2427"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 maedfakave dglklakrvy lgkdsrtvar rmapplmers tnwylpsapm vyavisdprm
       61 vdnpdmpsyq pyvhgmydpp aliplqmmgv nlnvdcyvdt aiigvsgtwr ihcvmgsrsc
      121 dcliavpmgn qgsilgvevd lptksyvtql igeqeskgig kiarpedggf ltphiftlti
      181 pqidggtnis iklrwsqkls ynagqfsltv pfcfpeyvtp aikkiskkek ielnvnssva
      241 ngilckaash plkeirrheg kfsflyeaei fkwsntdfrf sysvssgnif ggillqslyd
      301 ydqrdmfciy lfpgseknrk vfkkevvfvv disesmqgrp lestksaisa alsklspeds
      361 fniiafsnea fqfstsmela skdaierasa wistkytvgg stnlfiplek aadmlsntrd
      421 sipmiflvtd gsvkdernic hwmqkrltnq gvlspsihtf gigsfcnhyf lrmlamigrg
      481 eydaafdlds ievqmnklfs kglstvltni tidafddree ievyssripd lslespltiy
      541 gryqgsfpdn lkvtgilgdl ssftmdlkiq rakdipldsv larrqidllt aqawfsenkr
      601 feeevaklsi qtcniseytr mtlleknkml ktlkhfgawk kkgdphivve selpemillq
      661 rlsvgfgdli ataenirpgs qepelpevak ifikttsnyf ggicnrcccm gcirccskmn
      721 nqcattltql ctalacigcl hccsqsccpn qdd
//
LOCUS       XP_016673833             752 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673833
VERSION     XP_016673833.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673833.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..752
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=83797
     Region          331..497
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(331,400,430)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..752
                     /gene="LOC107893371"
                     /coded_by="XM_016818344.2:170..2428"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 maedfakave dglklakrvy lgkdsrtvar rmapplmers tnwylpsapm vyavisdprm
       61 vdnpdmpsyq pyvhgmydpp aliplqmmgv nlnvdcyvdt aiigvsgtwr ihcvmgsrsc
      121 dcliavpmgn qgsilgvevd lptksyvtql igeqeskgig kiarpedggf ltphiftlti
      181 pqidggtnis iklrwsqkls ynagqfsltv pfcfpeyvtp aikkiskkek ielnvnssva
      241 ngilckaash plkeirrheg kfsflyeaei fkwsntdfrf sysvssgnif ggillqslyd
      301 ydqrdmfciy lfpgseknrk vfkkevvfvv disesmqgrp lestksaisa alsklspeds
      361 fniiafsnea fqfstsmela skdaierasa wistkytvgg stnlfiplek aadmlsntrd
      421 sipmiflvtd gsvkdernic hwmqkrltnq gvlspsihtf gigsfcnhyf lrmlamigrg
      481 eydaafdlds ievqmnklfs kglstvltni tidafddree ievyssripd lslespltiy
      541 gryqgsfpdn lkvtgilgdl ssftmdlkiq rakdipldsv larrqidllt aqawfsenkr
      601 feeevaklsi qtcniseytr mtlleknkml ktlkhfgawk kgdphivves elpemillqr
      661 lsvgfgdlia taenirpgsq epelpevaki fikttsnyfg gicnrcccmg circcskmnn
      721 qcattltqlc talacigclh ccsqsccpnq dd
//
LOCUS       XP_040941563             727 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941563
VERSION     XP_040941563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085629.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..727
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=80945
     Region          331..>462
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(331,400,430)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..727
                     /gene="LOC107893371"
                     /coded_by="XM_041085629.1:167..2350"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 maedfakave dglklakrvy lgkdsrtvar rmapplmers tnwylpsapm vyavisdprm
       61 vdnpdmpsyq pyvhgmydpp aliplqmmgv nlnvdcyvdt aiigvsgtwr ihcvmgsrsc
      121 dcliavpmgn qgsilgvevd lptksyvtql igeqeskgig kiarpedggf ltphiftlti
      181 pqidggtnis iklrwsqkls ynagqfsltv pfcfpeyvtp aikkiskkek ielnvnssva
      241 ngilckaash plkeirrheg kfsflyeaei fkwsntdfrf sysvssgnif ggillqslyd
      301 ydqrdmfciy lfpgseknrk vfkkevvfvv disesmqgrp lestksaisa alsklspeds
      361 fniiafsnea fqfstsmela skdaierasa wistkytvgg stnlfiplek aadmlsntrd
      421 sipmiflvtd gsvkdernic hwmqkrltnq gvlspsihtf gidsievqmn klfskglstv
      481 ltnitidafd dreeievyss ripdlslesp ltiygryqgs fpdnlkvtgi lgdlssftmd
      541 lkiqrakdip ldsvlarrqi dlltaqawfs enkrfeeeva klsiqtcnis eytrmtllek
      601 nkmlktlkhf gawkkkgdph ivveselpem illqrlsvgf gdliataeni rpgsqepelp
      661 evakifiktt snyfggicnr cccmgcircc skmnnqcatt ltqlctalac igclhccsqs
      721 ccpnqdd
//
LOCUS       XP_040941564             724 aa            linear   PLN 06-AUG-2024
DEFINITION  inter-alpha-trypsin inhibitor heavy chain H6 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941564
VERSION     XP_040941564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085630.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..724
                     /product="inter-alpha-trypsin inhibitor heavy chain H6
                     isoform X4"
                     /calculated_mol_wt=80838
     Region          302..468
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(302,371,401)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..724
                     /gene="LOC107893371"
                     /coded_by="XM_041085630.1:167..2341"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 maedfakave dglklakrvy lgkdsrtvar rmapplmers tnwylpsapm vyavisdprm
       61 vdnpdmpsyq pyvhgmydpp aliplqmmgv nlnvdcyvdt aiigvsgvev dlptksyvtq
      121 ligeqeskgi gkiarpedgg fltphiftlt ipqidggtni siklrwsqkl synagqfslt
      181 vpfcfpeyvt paikkiskke kielnvnssv angilckaas hplkeirrhe gkfsflyeae
      241 ifkwsntdfr fsysvssgni fggillqsly dydqrdmfci ylfpgseknr kvfkkevvfv
      301 vdisesmqgr plestksais aalsklsped sfniiafsne afqfstsmel askdaieras
      361 awistkytvg gstnlfiple kaadmlsntr dsipmiflvt dgsvkderni chwmqkrltn
      421 qgvlspsiht fgigsfcnhy flrmlamigr geydaafdld sievqmnklf skglstvltn
      481 itidafddre eievyssrip dlslesplti ygryqgsfpd nlkvtgilgd lssftmdlki
      541 qrakdiplds vlarrqidll taqawfsenk rfeeevakls iqtcniseyt rmtlleknkm
      601 lktlkhfgaw kkkgdphivv eselpemill qrlsvgfgdl iataenirpg sqepelpeva
      661 kifikttsny fggicnrccc mgcirccskm nnqcattltq lctalacigc lhccsqsccp
      721 nqdd
//
LOCUS       XP_016673834             651 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673834
VERSION     XP_016673834.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673834.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..651
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=72599
     Region          229..395
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(229,298,328)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..651
                     /gene="LOC107893371"
                     /coded_by="XM_016818345.2:136..2091"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 mefsgtwrih cvmgsrscdc liavpmgnqg silgvevdlp tksyvtqlig eqeskgigki
       61 arpedggflt phiftltipq idggtnisik lrwsqklsyn agqfsltvpf cfpeyvtpai
      121 kkiskkekie lnvnssvang ilckaashpl keirrhegkf sflyeaeifk wsntdfrfsy
      181 svssgnifgg illqslydyd qrdmfciylf pgseknrkvf kkevvfvvdi sesmqgrple
      241 stksaisaal sklspedsfn iiafsneafq fstsmelask daierasawi stkytvggst
      301 nlfiplekaa dmlsntrdsi pmiflvtdgs vkdernichw mqkrltnqgv lspsihtfgi
      361 gsfcnhyflr mlamigrgey daafdldsie vqmnklfskg lstvltniti dafddreeie
      421 vyssripdls lespltiygr yqgsfpdnlk vtgilgdlss ftmdlkiqra kdipldsvla
      481 rrqidlltaq awfsenkrfe eevaklsiqt cniseytrmt lleknkmlkt lkhfgawkkk
      541 gdphivvese lpemillqrl svgfgdliat aenirpgsqe pelpevakif ikttsnyfgg
      601 icnrcccmgc irccskmnnq cattltqlct alacigclhc csqsccpnqd d
//
LOCUS       XP_016673835             649 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673835
VERSION     XP_016673835.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673835.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..649
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=72411
     Region          227..393
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(227,296,326)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..649
                     /gene="LOC107893371"
                     /coded_by="XM_016818346.2:135..2084"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 mectwrihcv mgsrscdcli avpmgnqgsi lgvevdlptk syvtqligeq eskgigkiar
       61 pedggfltph iftltipqid ggtnisiklr wsqklsynag qfsltvpfcf peyvtpaikk
      121 iskkekieln vnssvangil ckaashplke irrhegkfsf lyeaeifkws ntdfrfsysv
      181 ssgnifggil lqslydydqr dmfciylfpg seknrkvfkk evvfvvdise smqgrplest
      241 ksaisaalsk lspedsfnii afsneafqfs tsmelaskda ierasawist kytvggstnl
      301 fiplekaadm lsntrdsipm iflvtdgsvk dernichwmq krltnqgvls psihtfgigs
      361 fcnhyflrml amigrgeyda afdldsievq mnklfskgls tvltnitida fddreeievy
      421 ssripdlsle spltiygryq gsfpdnlkvt gilgdlssft mdlkiqrakd ipldsvlarr
      481 qidlltaqaw fsenkrfeee vaklsiqtcn iseytrmtll eknkmlktlk hfgawkkkgd
      541 phivveselp emillqrlsv gfgdliatae nirpgsqepe lpevakifik ttsnyfggic
      601 nrcccmgcir ccskmnnqca ttltqlctal acigclhccs qsccpnqdd
//
LOCUS       XP_040941565             632 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941565
VERSION     XP_040941565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085631.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..632
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=70659
     Region          210..376
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(210,279,309)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..632
                     /gene="LOC107893371"
                     /coded_by="XM_041085631.1:250..2148"
                     /db_xref="GeneID:107893371"
ORIGIN      
        1 mwiplllefq gsilgvevdl ptksyvtqli geqeskgigk iarpedggfl tphiftltip
       61 qidggtnisi klrwsqklsy nagqfsltvp fcfpeyvtpa ikkiskkeki elnvnssvan
      121 gilckaashp lkeirrhegk fsflyeaeif kwsntdfrfs ysvssgnifg gillqslydy
      181 dqrdmfciyl fpgseknrkv fkkevvfvvd isesmqgrpl estksaisaa lsklspedsf
      241 niiafsneaf qfstsmelas kdaierasaw istkytvggs tnlfipleka admlsntrds
      301 ipmiflvtdg svkdernich wmqkrltnqg vlspsihtfg igsfcnhyfl rmlamigrge
      361 ydaafdldsi evqmnklfsk glstvltnit idafddreei evyssripdl slespltiyg
      421 ryqgsfpdnl kvtgilgdls sftmdlkiqr akdipldsvl arrqidllta qawfsenkrf
      481 eeevaklsiq tcniseytrm tlleknkmlk tlkhfgawkk kgdphivves elpemillqr
      541 lsvgfgdlia taenirpgsq epelpevaki fikttsnyfg gicnrcccmg circcskmnn
      601 qcattltqlc talacigclh ccsqsccpnq dd
//
LOCUS       XP_016673830             385 aa            linear   PLN 06-AUG-2024
DEFINITION  methylthioribose-1-phosphate isomerase [Gossypium hirsutum].
ACCESSION   XP_016673830
VERSION     XP_016673830.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673830.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..385
                     /product="methylthioribose-1-phosphate isomerase"
                     /calculated_mol_wt=40760
     Region          19..362
                     /region_name="salvage_mtnA"
                     /note="S-methyl-5-thioribose-1-phosphate isomerase;
                     TIGR00512"
                     /db_xref="CDD:273112"
     CDS             1..385
                     /gene="LOC107893370"
                     /coded_by="XM_016818341.2:135..1292"
                     /db_xref="GeneID:107893370"
ORIGIN      
        1 maldsklidd vlavdntlqa icykrgslql ldqrklplet vyldihgsad gwnairemvv
       61 rgapaiaiaa alslavevan lkdfnggskd aasfleskle ylvssrptav nlsdaaiklk
      121 eiiskaastv tvpesvfqay ieaaeimldd dvatnkaigs hgasflqhqq nnskrfsvlt
      181 hcntgslata gygtalgvir alhaqgvler ayctetrpfn qgsrltafel vhekipatlv
      241 adsaaaalmk egrvdavvvg adrvtangdt ankigtysla lcamhhhipf yvaapltsid
      301 lslssgqeiv ieersakell htrgglgeqv aasgisvwnp afdvtpanli agiitekgvi
      361 tkndmkddaf dikdfiekat gkstv
//
LOCUS       XP_016673827             361 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRICTOSIDINE SYNTHASE-LIKE 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673827
VERSION     XP_016673827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..361
                     /product="protein STRICTOSIDINE SYNTHASE-LIKE 4 isoform
                     X1"
                     /calculated_mol_wt=39599
     Region          56..338
                     /region_name="YvrE"
                     /note="Sugar lactone lactonase YvrE [Carbohydrate
                     transport and metabolism]; COG3386"
                     /db_xref="CDD:442613"
     CDS             1..361
                     /gene="LOC107893368"
                     /coded_by="XM_016818338.2:173..1258"
                     /db_xref="GeneID:107893368"
ORIGIN      
        1 mavfkkslvf llvlltafal qiiffspisp dilelpltsp svsvppsnnq lqkviklgeg
       61 llegpedvav dedgalytat rdgwirrlhr ngsredwkkf esntllgiat pkrgglivcd
      121 adkgllkvtd dgvtvlashv dgseirfadd aieasdgsiy fsvastkygl ydwtldllea
      181 kphgqilkyd pstqhtsill dglylangva lpkdedflli cetfrfrclk ywlkgeskgk
      241 tevfvenlpd gpdninlapd gsfwialiqv vqivpqgmef vhtskalkli isnfpklvel
      301 vtsgvkkkat vinvaangni ikrfddpdgt vvsfvtsale fedhlylgsl kndfvakfpl
      361 k
//
LOCUS       XP_016673828             358 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRICTOSIDINE SYNTHASE-LIKE 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673828
VERSION     XP_016673828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818339.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="protein STRICTOSIDINE SYNTHASE-LIKE 4 isoform
                     X2"
                     /calculated_mol_wt=39272
     Region          56..335
                     /region_name="YvrE"
                     /note="Sugar lactone lactonase YvrE [Carbohydrate
                     transport and metabolism]; COG3386"
                     /db_xref="CDD:442613"
     Region          152..236
                     /region_name="Str_synth"
                     /note="Strictosidine synthase; cl22863"
                     /db_xref="CDD:354965"
     CDS             1..358
                     /gene="LOC107893368"
                     /coded_by="XM_016818339.2:197..1273"
                     /db_xref="GeneID:107893368"
ORIGIN      
        1 mavfkkslvf llvlltafal qiiffspisp dilelpltsp svsvppsnnq lqkviklgeg
       61 llegpedvav dedgalytat rdgwirrlhr ngsredwkkf esntllgiat pkrgglivcd
      121 adkgllkvtd dgvtvlashv dgseirfadd aieasdgsiy fsvastkygl ydwtldllea
      181 kphgqilkyd pstqhtsill dglylangva lpkdedflli cetfrfrclk ywlkgeskgk
      241 tevfvenlpd gpdninlapd gsfwialiqi vpqgmefvht skalkliisn fpklvelvts
      301 gvkkkatvin vaangniikr fddpdgtvvs fvtsalefed hlylgslknd fvakfplk
//
LOCUS       XP_016673829             246 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit alpha type-6 [Gossypium hirsutum].
ACCESSION   XP_016673829
VERSION     XP_016673829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..246
                     /product="proteasome subunit alpha type-6"
                     /calculated_mol_wt=27162
     Region          8..220
                     /region_name="proteasome_alpha_type_6"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...;
                     cd03754"
                     /db_xref="CDD:239723"
     Site            order(11..14,16..17,19..20,24,27,30..31,34,43,58,60..61,
                     84..86,88..89,120,123,126..127,130..134,152,157..158,160,
                     162..163,165)
                     /site_type="other"
                     /note="alpha subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239723"
     Site            order(37,53,55,68,170)
                     /site_type="active"
                     /db_xref="CDD:239723"
     CDS             1..246
                     /gene="LOC107893369"
                     /coded_by="XM_016818340.2:159..899"
                     /db_xref="GeneID:107893369"
ORIGIN      
        1 msrgsgggyd rhitifspeg rlfqveyafk avkaagitsi gvrgkdsvcv vtqkkvpdkl
       61 ldqtsvthlf pitkflglla tgmtadartl vqqarneaae frfrygyemp vdvlskwiad
      121 ksqvytqhay mrplgvvamv lgideekgpq lykcdpaghf yghkatsags keqeainfle
      181 kkmkndpaft yeetvqtais alqsvlqedf kateievgvv kadnpvfrvm steeidehlt
      241 aiserd
//
LOCUS       XP_016673826             635 aa            linear   PLN 06-AUG-2024
DEFINITION  cation/calcium exchanger 4 [Gossypium hirsutum].
ACCESSION   XP_016673826
VERSION     XP_016673826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..635
                     /product="cation/calcium exchanger 4"
                     /calculated_mol_wt=70158
     Region          13..632
                     /region_name="PLN03151"
                     /note="cation/calcium exchanger; Provisional"
                     /db_xref="CDD:215604"
     CDS             1..635
                     /gene="LOC107893367"
                     /coded_by="XM_016818337.2:314..2221"
                     /db_xref="GeneID:107893367"
ORIGIN      
        1 mfpslffvfe mepkfrgivr svfalvllfl fynhengfkt pflvkprvgf ydqsevihrr
       61 imetndtsve vndlavrkpk icsgliehkg ypsqcdylia hpecnpggff nyikffycsc
      121 qnvsflgftv laiwlvalfy llgntaadyf cfsleklssl lkmsptvagv tllplgngap
      181 dlfasiaafa sknssevgin svlggavfvt cvvvgiislc iaekkvqidr ysfvrdigff
      241 lfcliwlfli ltvgevtvgt allfvllyli yvlavalnev grinirvfkl kyvtpllpvr
      301 wcssssigde egdsvyasll esgsksdvpc lenrlphwmw asqvaiysde leedpkstwg
      361 wndedevvlk erslfscskf vsllefpltl prqltipmve erwskgyava satlapilla
      421 flwntkgdda tplsqeivyf igvtfggilg vpaylftssd hpphrfllpw vlggffmsiv
      481 wfymianelv allvglgvif gikpsilglt vlawgnsmgd lmsdialamn grdsvqiams
      541 gcyagpmfnt laglgislvl gawnkkpspy ivprdsslfc tigflalglv wsfivlprnd
      601 mrpnktlgig limiylifvi vqvsaslgvl sigwd
//
LOCUS       XP_016675508             134 aa            linear   PLN 06-AUG-2024
DEFINITION  copper transporter 5 [Gossypium hirsutum].
ACCESSION   XP_016675508
VERSION     XP_016675508.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820019.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="copper transporter 5"
                     /calculated_mol_wt=14967
     Region          4..115
                     /region_name="Ctr"
                     /note="Ctr copper transporter family; pfam04145"
                     /db_xref="CDD:461194"
     CDS             1..134
                     /gene="LOC107894807"
                     /coded_by="XM_016820019.2:205..609"
                     /db_xref="GeneID:107894807"
ORIGIN      
        1 mhltlywgkn vtllvdswkt dswlsylftl lacflfssfy qymedrrlrf rslssssssa
       61 vpllpkyqrs akfatavlfg vnsaigyllm lalmsfnggv flavvsglav gylffrlidd
      121 eepwvvidna caca
//
LOCUS       XP_016673821             760 aa            linear   PLN 06-AUG-2024
DEFINITION  subtilisin-like protease SBT1.8 [Gossypium hirsutum].
ACCESSION   XP_016673821
VERSION     XP_016673821.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673821.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..760
                     /product="subtilisin-like protease SBT1.8"
                     /calculated_mol_wt=80714
     Region          23..100
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          97..576
                     /region_name="Peptidases_S8_3"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; cd04852"
                     /db_xref="CDD:173795"
     Site            order(138,214,265,284,316,542)
                     /site_type="active"
                     /db_xref="CDD:173795"
     Site            order(138,214,542)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     Region          346..469
                     /region_name="PA_subtilisin_like"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     cd02120"
                     /db_xref="CDD:239035"
     Site            435..437
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239035"
     Region          657..754
                     /region_name="fn3_6"
                     /note="Fibronectin type-III domain; pfam17766"
                     /db_xref="CDD:465493"
     CDS             1..760
                     /gene="LOC107893364"
                     /coded_by="XM_016818332.2:237..2519"
                     /db_xref="GeneID:107893364"
ORIGIN      
        1 maamasstff ffllcltvta kktyivhmkh qdkplsfeth ndwyrsslqs ltatpaesll
       61 ysynaafngf aasldpeqae algksdsvlg vyedtvynlh ttrtpqflgl daesglwagh
      121 ntqqleqasr dviigvldtg vwpesksfdd sgmpevpakw rgecesapdf npkfcnrkli
      181 garsfskgyr masggggiyk kpgeiqsprd kdghgthtas taagshvana sllgyasgta
      241 rgmatharva tykvcwetgc fgsdilagme raiedgvdvl slslgggsap yfrdtiaiga
      301 ftamekgifv scsagnsgpt katlanvapw imtvgagtld rdfpayavlg nkiryngvsl
      361 ysgrgmgkkp vglvyskgns sgsnlcltgs ldpalvrgkv vlcdrgttar vekgavvrda
      421 ggvgmilant etsgeelvad shllpavavg rkvgdlirey arsdpnptaa lvfggtvldi
      481 kpspvvaafs srgpnmvtpq ilkpdvigpg vnilaawseg igptglakds rktmfnimsg
      541 tsmscphisg laalikaahp ewspsaiksa lmttaytqdn tnstlrdaad gslsnpwahg
      601 aghvdpqkal spgliydist deyitflcsl gytvdhvkti vkrpnvtcsk kfkdpgelny
      661 psfsvmfggk rvvrytrelt nvgparsmyk vtvngpstvg isvrpktlif rtvgekkryt
      721 vtfvakrgts pmakpefgsi vwgnaqnqvk spvsfswslm
//
LOCUS       XP_016673822             395 aa            linear   PLN 06-AUG-2024
DEFINITION  guanine nucleotide-binding protein subunit gamma 3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016673822
VERSION     XP_016673822.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673822.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..395
                     /product="guanine nucleotide-binding protein subunit gamma
                     3 isoform X1"
                     /calculated_mol_wt=42630
     Region          <135..>221
                     /region_name="VESA1_N"
                     /note="Variant erythrocyte surface antigen-1; pfam12785"
                     /db_xref="CDD:463704"
     CDS             1..395
                     /gene="LOC107893365"
                     /coded_by="XM_016818333.2:881..2068"
                     /db_xref="GeneID:107893365"
ORIGIN      
        1 maarsggsss ssvptlpppc prsppeypdl ygkrreaakt qmlereisfl eeelksvegl
       61 qpasrfckev tdfvmansdp liptrsrknr kscrfwkwlc gipcfnlswi ccccysacsc
      121 hlkclqccdc dlcncsscic slckcrrcsc gssehssckc sscdlpsckc sscdctsckc
      181 sscncdpckc sscdcnpckc sscdcnpckc sscncnpckc sscdcnpckc spcdcssckc
      241 sslcdcsscn csscncssck csslcdcssc kcsscncssc kcsslcdcss ckcsscdcks
      301 clscctipkw rckcsscnlc hcnpclsccs ipkwrccsfp ksgccqkisc srnccifqfp
      361 sctgcfcckw kcscpkvtrc csctktscnp cclff
//
LOCUS       XP_016673824             394 aa            linear   PLN 06-AUG-2024
DEFINITION  guanine nucleotide-binding protein subunit gamma 3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016673824
VERSION     XP_016673824.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673824.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..394
                     /product="guanine nucleotide-binding protein subunit gamma
                     3 isoform X2"
                     /calculated_mol_wt=42474
     Region          <134..>220
                     /region_name="VESA1_N"
                     /note="Variant erythrocyte surface antigen-1; pfam12785"
                     /db_xref="CDD:463704"
     CDS             1..394
                     /gene="LOC107893365"
                     /coded_by="XM_016818335.2:907..2091"
                     /db_xref="GeneID:107893365"
ORIGIN      
        1 maarsggsss ssvptlpppc prsppeypdl ygkrreaakt qmlereisfl eeelksvegl
       61 qpasrfckev tdfvmansdp liptsrknrk scrfwkwlcg ipcfnlswic cccysacsch
      121 lkclqccdcd lcncsscics lckcrrcscg ssehssckcs scdlpsckcs scdctsckcs
      181 scncdpckcs scdcnpckcs scdcnpckcs scncnpckcs scdcnpckcs pcdcssckcs
      241 slcdcsscnc sscncssckc sslcdcssck csscncssck csslcdcssc kcsscdcksc
      301 lscctipkwr ckcsscnlch cnpclsccsi pkwrccsfpk sgccqkiscs rnccifqfps
      361 ctgcfcckwk cscpkvtrcc sctktscnpc clff
//
LOCUS       XP_040941566             441 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase RIPK isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941566
VERSION     XP_040941566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085632.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..441
                     /product="serine/threonine-protein kinase RIPK isoform X1"
                     /calculated_mol_wt=49447
     Region          91..365
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(91..95,99,118,120,149,165..168,172,174,215,217,
                     219..220,222,233,236,254..257)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(91..95,99,118,120,149,165..168,172,215,217,219..220,
                     222,233)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(95,172,174,215,217,219,236,254..257)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(232..239,250..257)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..441
                     /gene="LOC121212572"
                     /coded_by="XM_041085632.1:254..1579"
                     /db_xref="GeneID:121212572"
ORIGIN      
        1 mavmkftwrs iiprcskgie epeaeaeaep etkkqdskqg sfsrlamidl sypssrfted
       61 lstslagsnl yvftleelkv itqcfssanf lgeggfgpvh kgfiddnlrp gleaqpvavk
      121 lldleglqgh rewltevvfl aqlshphlvk ligyccedeh rllvyeympr gslenqlfak
      181 ysvplpwstr mkialgaakg laylheaekp viyrdfkasn illdsdysak lsdfglakdg
      241 pegdkthvst rvmgtrgyaa peyimtghlt amsdvysfgv vllelltgrr sldksrspre
      301 qnlaewarpm lnesrrlari mdpklegqys etgarkaaal ayqclshrak qrpkmsdvvn
      361 ileplldyee tsvgtfvytv pthqnggspp kddtdtkece aktelkkeng dhhnrhhhrr
      421 shksrdghrh rnksssqssv h
//
LOCUS       XP_040941567             420 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase RIPK isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941567
VERSION     XP_040941567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085633.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..420
                     /product="serine/threonine-protein kinase RIPK isoform X2"
                     /calculated_mol_wt=47200
     Region          91..344
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(91..94,97,99,118,120,149,165..168,215,219..220,222,
                     232..233)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..420
                     /gene="LOC121212572"
                     /coded_by="XM_041085633.1:192..1454"
                     /db_xref="GeneID:121212572"
ORIGIN      
        1 mavmkftwrs iiprcskgie epeaeaeaep etkkqdskqg sfsrlamidl sypssrfted
       61 lstslagsnl yvftleelkv itqcfssanf lgeggfgpvh kgfiddnlrp gleaqpvavk
      121 lldleglqgh rewltevvfl aqlshphlvk ligyccedeh rllvyeympr gslenqlfak
      181 ysvplpwstr mkialgaakg laylheaekp viyrdfkasn illdsdysak lsdfglakdg
      241 pegdkthvst rvmgtrgyaa peyimtgrrs ldksrspreq nlaewarpml nesrrlarim
      301 dpklegqyse tgarkaaala yqclshrakq rpkmsdvvni leplldyeet svgtfvytvp
      361 thqnggsppk ddtdtkecea ktelkkengd hhnrhhhrrs hksrdghrhr nksssqssvh
//
LOCUS       XP_016673811             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_016673811
VERSION     XP_016673811.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673811.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_016818322.2:390..1964"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_016673813             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_016673813
VERSION     XP_016673813.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818324.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673813.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_016818324.2:394..1968"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_040941568             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_040941568
VERSION     XP_040941568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085634.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_041085634.1:390..1964"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_016673817             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_016673817
VERSION     XP_016673817.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673817.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_016818328.2:390..1964"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_040941569             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_040941569
VERSION     XP_040941569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085635.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_041085635.1:390..1964"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_040941570             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_040941570
VERSION     XP_040941570.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085636.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_041085636.1:390..1964"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_040941571             524 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g06000 [Gossypium
            hirsutum].
ACCESSION   XP_040941571
VERSION     XP_040941571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085637.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..524
                     /product="pentatricopeptide repeat-containing protein
                     At2g06000"
                     /calculated_mol_wt=58910
     Region          <108..>490
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          152..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          183..210
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          251..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          289..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          357..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..490
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..524
                     /gene="LOC107893359"
                     /coded_by="XM_041085637.1:390..1964"
                     /db_xref="GeneID:107893359"
ORIGIN      
        1 mtlfsltnrv srvlsaskvf irhrriqfhg gshpqgnkep kaiqkqeswf vkvvctlfvy
       61 sqplddacls ylnnnltpli efevvkwlkn ptfglkvlel srlnlsinhs fwtynllirs
      121 fccmglygsa rlvfdymkid ghlpdstllg fmissfgrag efgmarklla eaqsddvmvt
      181 ifavnnllnm mvkqnnleea vslykenlgs nfnpdtwtfn ilirglcrvg kvdqafeffn
      241 dmrsfgcfpd ivtyntiing lcreyevdrg hsllneirlr ddcapnvvty tsvisgyckl
      301 gkmeeasalf demmssgtlp svvtfnvlid gfgkvgdmls akslyekmas fgcipdvvtf
      361 tslingycqi gdvnrslqlw damkvknvsp nvytfaitin alckenrlre afrllrelqc
      421 rnivpkpfif npvidgfcka gnldeanriv aemekkkcdp dkvtftilii ghcmkgrmlk
      481 aisifdkmls vgctpdditv rsliscllka gmpkeaylis tits
//
LOCUS       XP_016673818             361 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FIP1 [Gossypium hirsutum].
ACCESSION   XP_016673818
VERSION     XP_016673818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..361
                     /product="protein FIP1"
                     /calculated_mol_wt=40820
     Region          70..233
                     /region_name="TMEM192"
                     /note="TMEM192 family; pfam14802"
                     /db_xref="CDD:434223"
     Region          210..>358
                     /region_name="HOOK"
                     /note="HOOK protein coiled-coil region; pfam05622"
                     /db_xref="CDD:461694"
     CDS             1..361
                     /gene="LOC107893360"
                     /coded_by="XM_016818329.2:212..1297"
                     /db_xref="GeneID:107893360"
ORIGIN      
        1 mmsnerhass nptspqenda mfldilheap lfghrkprsi vggvfycfil agcailaaaa
       61 pwifqpighl vlpllcscdv vllivtgifq qyhvyqvqki rlqgyysfsq klkhivrlpf
      121 aitaygtagm ilvmvwepyi rilststilr iimlveavcs gffmsvyigy iyqynsldsq
      181 pdvlkslysp lqasspledl ryhdggrlsd qqmallqyqr enlhflseei lrlqecfsky
      241 egsndgstpq vdlahllaar dqelrtvsae mnqlqselrl arsliadtea evqcvrttns
      301 qyveenerlr ailgewstra akleraleve rmsnlelqkk istfrnqtya sstesseqrg
      361 a
//
LOCUS       XP_040941572             355 aa            linear   PLN 06-AUG-2024
DEFINITION  thiol protease aleurain-like [Gossypium hirsutum].
ACCESSION   XP_040941572
VERSION     XP_040941572.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085638.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..355
                     /product="thiol protease aleurain-like"
                     /calculated_mol_wt=38836
     Region          56..112
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     pfam08246"
                     /db_xref="CDD:462410"
     Region          138..353
                     /region_name="Peptidase_C1"
                     /note="Papain family cysteine protease; pfam00112"
                     /db_xref="CDD:425470"
     Site            order(156,162,302,322)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(206..207,273,300,303,348)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     CDS             1..355
                     /gene="LOC121212573"
                     /coded_by="XM_041085638.1:154..1221"
                     /db_xref="GeneID:121212573"
ORIGIN      
        1 marltlvssi ilmlccfaaa stfedsnpir mvsdglrgye ssvlrvight rhaisfarfa
       61 ykhgrkyetv eemklrfqif kenldlirst nkkglsytla vnqfadwswd efqkhrlgaa
      121 qncsattkgn hqltdvvlpe skdwreagiv spvkeqgscg scwtfsttga leaayhqafg
      181 kgislseqql vdcagafnnf gchgglpsqa feyikynggl dteeaypyta kdgeckfsae
      241 nvgvqvidsv nitlgaedel khavalvqpv svafqvitgf rfyktgvfts dkcgttsqdv
      301 nhavlavgyg vengvpywli knswgaqwgd ngyfkmemgk nmcgvatcas ypvva
//
LOCUS       XP_016675507             313 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675507
VERSION     XP_016675507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820018.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35511
     CDS             1..313
                     /gene="LOC107894806"
                     /coded_by="XM_016820018.2:102..1043"
                     /db_xref="GeneID:107894806"
ORIGIN      
        1 mvprgayfvp dqqfnmfhni drelytvlvm nlcrdpvesl hcialwlwle rvgfkkvvtk
       61 llslprvlvn eladealacl gvihnekvsp lstrrndtpl mqrlidsela lpffakhrli
      121 avrglaklvn evcmralkdi mqqaverkah qsladlslyh qqqqrqhprq vqvqpplaar
      181 vptpapprvq fgslpaaaqt nevhpddrti fvtfskgylv hewevrefft rlygnciesl
      241 hmqdvmpneq plfarivchs paaieyilng nvkakfting khvwarkfvp krpkpaspap
      301 ppppfnlpvs lgi
//
LOCUS       XP_040941573             281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941573
VERSION     XP_040941573.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085639.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32403
     Region          200..>263
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
     CDS             1..281
                     /gene="LOC121212574"
                     /coded_by="XM_041085639.1:98..943"
                     /db_xref="GeneID:121212574"
ORIGIN      
        1 mstisfprtn fftyacngss prhklhsisl tpttkmntkl iglvrkedhs vlprtslith
       61 lkfnslepsd edlfhekklv fgnyvarqav rdeelwvaay lraethwedq pgdekliehl
      121 kmdfierefn slkmrcrgqf gqinkcvvav ckpdlnvqrt viksvvgald isirhllhge
      181 tfpgqhkkyr fpiintknlq kyayisnlct rksarrqgig snmmrfvief aklsgiksvy
      241 vhvcrdnkpa fnlyrklnfe vvemanaale eeqmyllcyk a
//
LOCUS       XP_016673809             624 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 35 [Gossypium hirsutum].
ACCESSION   XP_016673809
VERSION     XP_016673809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..624
                     /product="O-fucosyltransferase 35"
                     /calculated_mol_wt=70078
     Region          232..553
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(240..243,397,399,473..475,516,535..537)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..624
                     /gene="LOC107893358"
                     /coded_by="XM_016818320.2:147..2021"
                     /db_xref="GeneID:107893358"
ORIGIN      
        1 mehhhntsdg vsqrvnsprf sgpmtrrahs fkrnnngnsq tstgnnvvgg ssngssngsn
       61 gnnlsvhhei dlqsssprse vgvvglvsie glsqrkglfl rkpsvgslvf dfglkekkkl
      121 ghwmflvfcg vclflgvfki catgwfgsai etlasnqdlp dpstnqlkrt degshdygyr
      181 dggsdsdrtl mtvasdiaeh sgiwskpsse nfsqcidhsk nhkkpdaktn gyilvnangg
      241 lnqmrfgicd vvavakimka tlvlpsldht sywadesgfk dlfdwqhfie tlkddvhive
      301 tippeysgie pfnktpisws kvsyykaevl pllkqhkviy fthtdsrlan ndipssvqkl
      361 rcrvsykalk ysapieelgs tlisrmrqng spyialhlry ekdmlaftgc shsltaeedd
      421 elrrmryevs hwkekeingt errlfggcpl tpretslllr algfppstri ylvageaygn
      481 gsmeplkedf pnifshssla tdeelnpfkn hqnmlagldy vvalqsdvfv ytydgnmaka
      541 vqghrrfenf kktinpdrmn fvrlvdeyde gniswekfss kvkklhedrn gapylrerge
      601 fpkleesfya npfpgcfcer teei
//
LOCUS       XP_016673808             260 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 6 [Gossypium hirsutum].
ACCESSION   XP_016673808
VERSION     XP_016673808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818319.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..260
                     /product="growth-regulating factor 6"
                     /calculated_mol_wt=29550
     Region          13..47
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          75..116
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..260
                     /gene="LOC107893357"
                     /coded_by="XM_016818319.2:66..848"
                     /db_xref="GeneID:107893357"
ORIGIN      
        1 mmmmsgrnss gfpftatqwe elqnqvlifk ymvlgipips yllftiktsf lephqhdkig
       61 wncggemgme rkvdpepgrc rrtdgkkwrc sklaytdsky cerhmhrgkn rsrkhveeee
      121 aastgitmvn psstatqsls lslssfetha stekptlcll gsssyrlkqv vdhepcgtrr
      181 sfsgssmgdg tswqlqslkq skhdqddddk rkpkrkihrf idewppkhrd swldyddhks
      241 sksssdsttk lsisisstfs
//
LOCUS       XP_016673806             222 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 20a isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016673806
VERSION     XP_016673806.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673806.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..222
                     /product="mediator of RNA polymerase II transcription
                     subunit 20a isoform X1"
                     /calculated_mol_wt=25414
     Region          1..203
                     /region_name="Med20"
                     /note="TATA-binding related factor (TRF) of subunit 20 of
                     Mediator complex; pfam08612"
                     /db_xref="CDD:400779"
     CDS             1..222
                     /gene="LOC107893356"
                     /coded_by="XM_016818317.2:162..830"
                     /db_xref="GeneID:107893356"
ORIGIN      
        1 mplkwvffwq pnagstvnsq ilnevsqcve singvkegrw katltfykpm lrdqtlsaef
       61 prefigislp eqpnkyyfvl rfnkivlesd ssiqlimekl qsyksrvaln fegfqyqlgd
      121 fqlrvgkvvp shsenlrgiv meveylpiss lekskqimee fsdiwkdais krslpghfih
      181 iepnfsdygl adhytsqhta vqythvtsql iasvqavqtg rn
//
LOCUS       XP_016673807             107 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 20a isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016673807
VERSION     XP_016673807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="mediator of RNA polymerase II transcription
                     subunit 20a isoform X2"
                     /calculated_mol_wt=12017
     Region          <28..88
                     /region_name="Med20"
                     /note="TATA-binding related factor (TRF) of subunit 20 of
                     Mediator complex; pfam08612"
                     /db_xref="CDD:400779"
     CDS             1..107
                     /gene="LOC107893356"
                     /coded_by="XM_016818318.2:865..1188"
                     /db_xref="GeneID:107893356"
ORIGIN      
        1 msksmhayef iltgmssvlh llqhsilvey lpissleksk qimeefsdiw kdaiskrslp
       61 ghfihiepnf sdygladhyt sqhtavqyth vtsqliasvq avqtgrn
//
LOCUS       XP_016675504             288 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675504
VERSION     XP_016675504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820015.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..288
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31291
     Region          173..277
                     /region_name="RNA_pol_Rpc4"
                     /note="RNA polymerase III RPC4; pfam05132"
                     /db_xref="CDD:461558"
     CDS             1..288
                     /gene="LOC107894804"
                     /coded_by="XM_016820015.2:157..1023"
                     /db_xref="GeneID:107894804"
ORIGIN      
        1 mepkkeqtna prkmrfapka pprkapklev ktevvedida vqardllqrl nqtsartkpk
       61 vekkvsssqv afgfgggasi ktfgtfkgan hssgetfsgg vhgsglrvek eykepwdyys
      121 yypltlpmrr pysgcpefld eeefaaqnva ydensiepav glglmeenle pmmlflqlpp
      181 tlpiikaghe gasssgssrt vrsakkmcgl telpaglmgk mlvyksgavk lklgdtiydv
      241 npglscvfaq dvvavdtakk qccvvgevnk hvvvtpdmds vlnrlsel
//
LOCUS       XP_016673804             117 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ELF4-LIKE 3 [Gossypium hirsutum].
ACCESSION   XP_016673804
VERSION     XP_016673804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..117
                     /product="protein ELF4-LIKE 3"
                     /calculated_mol_wt=12723
     Region          15..97
                     /region_name="Elf4"
                     /note="Early Flowering 4 domain; pfam07011"
                     /db_xref="CDD:429247"
     CDS             1..117
                     /gene="LOC107893354"
                     /coded_by="XM_016818315.2:246..599"
                     /db_xref="GeneID:107893354"
ORIGIN      
        1 megdsdtysg lgtgeidskv vqtfqksfvq vqnildqnrl lineinqnhe skiphnltrn
       61 vglirelnnn irkvvdlygd lsssftksmd assegdsssg aamksdgktg hkrnrpa
//
LOCUS       XP_040941575             117 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ELF4-LIKE 3 [Gossypium hirsutum].
ACCESSION   XP_040941575
VERSION     XP_040941575.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085641.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..117
                     /product="protein ELF4-LIKE 3"
                     /calculated_mol_wt=12723
     Region          15..97
                     /region_name="Elf4"
                     /note="Early Flowering 4 domain; pfam07011"
                     /db_xref="CDD:429247"
     CDS             1..117
                     /gene="LOC107893354"
                     /coded_by="XM_041085641.1:200..553"
                     /db_xref="GeneID:107893354"
ORIGIN      
        1 megdsdtysg lgtgeidskv vqtfqksfvq vqnildqnrl lineinqnhe skiphnltrn
       61 vglirelnnn irkvvdlygd lsssftksmd assegdsssg aamksdgktg hkrnrpa
//
LOCUS       XP_016673805             117 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ELF4-LIKE 3 [Gossypium hirsutum].
ACCESSION   XP_016673805
VERSION     XP_016673805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..117
                     /product="protein ELF4-LIKE 3"
                     /calculated_mol_wt=12723
     Region          15..97
                     /region_name="Elf4"
                     /note="Early Flowering 4 domain; pfam07011"
                     /db_xref="CDD:429247"
     CDS             1..117
                     /gene="LOC107893354"
                     /coded_by="XM_016818316.2:254..607"
                     /db_xref="GeneID:107893354"
ORIGIN      
        1 megdsdtysg lgtgeidskv vqtfqksfvq vqnildqnrl lineinqnhe skiphnltrn
       61 vglirelnnn irkvvdlygd lsssftksmd assegdsssg aamksdgktg hkrnrpa
//
LOCUS       XP_040941576             117 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ELF4-LIKE 3 [Gossypium hirsutum].
ACCESSION   XP_040941576
VERSION     XP_040941576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085642.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..117
                     /product="protein ELF4-LIKE 3"
                     /calculated_mol_wt=12723
     Region          15..97
                     /region_name="Elf4"
                     /note="Early Flowering 4 domain; pfam07011"
                     /db_xref="CDD:429247"
     CDS             1..117
                     /gene="LOC107893354"
                     /coded_by="XM_041085642.1:359..712"
                     /db_xref="GeneID:107893354"
ORIGIN      
        1 megdsdtysg lgtgeidskv vqtfqksfvq vqnildqnrl lineinqnhe skiphnltrn
       61 vglirelnnn irkvvdlygd lsssftksmd assegdsssg aamksdgktg hkrnrpa
//
LOCUS       XP_016673803             629 aa            linear   PLN 06-AUG-2024
DEFINITION  replication protein A 70 kDa DNA-binding subunit A isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016673803
VERSION     XP_016673803.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673803.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..629
                     /product="replication protein A 70 kDa DNA-binding subunit
                     A isoform X1"
                     /calculated_mol_wt=71006
     Region          3..621
                     /region_name="rpa1"
                     /note="replication factor-a protein 1 (rpa1); TIGR00617"
                     /db_xref="CDD:273177"
     CDS             1..629
                     /gene="LOC107893353"
                     /coded_by="XM_016818314.2:298..2187"
                     /db_xref="GeneID:107893353"
ORIGIN      
        1 mpvnltrnai ammnsgdvns kplvqvvdik lignsqeryr fllsdsestq hamlatqlne
       61 qvrtgrvkkg siiqlidyic stvqnrriiv vlnmetiipe yeiignpkll mgsepeanks
      121 mpnnnlfeps trstnnrysa papankaqsf qptiqpayqp ppnykiqgpi mkneaparii
      181 piaalnpyqg rwaikarvta kgdlrrynna rgdgkvfsfd lldsdggeir vtcfnavvdr
      241 fynvievgkv yliskgslkp aqknfnhlkn eweiflesns tvelcpdedg siprqqfsfr
      301 piteiesaen nsildvigiv isvnpsvpil rkngmetqrr ilnlkdvsgk sveltlwgdf
      361 cnkegqklqe mvdsglfpvl avkagkvndf ngksigtiss tqlfidpdcp eaqglrawfe
      421 sggrntasis iskeimpggs kneirktltq ikdeglgrsd kpdwvtakat vvfiktdnfc
      481 ytacplmigd rqcnkkvtqs gnkrwlcdrc nqefeecdyr yllqvqiqdh tgltwvtafq
      541 eageeilgcs akemyllkye lqddtrfgei irsrlfhqyl frlkikeely gdeqrvkitv
      601 vkvdkvnysa esrylldmvt knlrnrkqf
//
LOCUS       XP_040941577             536 aa            linear   PLN 06-AUG-2024
DEFINITION  replication protein A 70 kDa DNA-binding subunit A isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941577
VERSION     XP_040941577.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085643.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="replication protein A 70 kDa DNA-binding subunit
                     A isoform X2"
                     /calculated_mol_wt=60566
     Region          10..528
                     /region_name="rpa1"
                     /note="replication factor-a protein 1 (rpa1); TIGR00617"
                     /db_xref="CDD:273177"
     CDS             1..536
                     /gene="LOC107893353"
                     /coded_by="XM_041085643.1:264..1874"
                     /db_xref="GeneID:107893353"
ORIGIN      
        1 metiipeyei ignpkllmgs epeanksmpn nnlfepstrs tnnrysapap ankaqsfqpt
       61 iqpayqpppn ykiqgpimkn eapariipia alnpyqgrwa ikarvtakgd lrrynnargd
      121 gkvfsfdlld sdggeirvtc fnavvdrfyn vievgkvyli skgslkpaqk nfnhlknewe
      181 iflesnstve lcpdedgsip rqqfsfrpit eiesaennsi ldvigivisv npsvpilrkn
      241 gmetqrriln lkdvsgksve ltlwgdfcnk egqklqemvd sglfpvlavk agkvndfngk
      301 sigtisstql fidpdcpeaq glrawfesgg rntasisisk eimpggskne irktltqikd
      361 eglgrsdkpd wvtakatvvf iktdnfcyta cplmigdrqc nkkvtqsgnk rwlcdrcnqe
      421 feecdyryll qvqiqdhtgl twvtafqeag eeilgcsake myllkyelqd dtrfgeiirs
      481 rlfhqylfrl kikeelygde qrvkitvvkv dkvnysaesr ylldmvtknl rnrkqf
//
LOCUS       XP_016673802             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673802
VERSION     XP_016673802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12526
     Region          1..123
                     /region_name="PLN00088"
                     /note="predicted protein; Provisional"
                     /db_xref="CDD:177709"
     Region          87..123
                     /region_name="PsbX"
                     /note="Photosystem II reaction centre X protein (PsbX);
                     pfam06596"
                     /db_xref="CDD:429023"
     CDS             1..124
                     /gene="LOC107893352"
                     /coded_by="XM_016818313.2:1262..1636"
                     /db_xref="GeneID:107893352"
ORIGIN      
        1 mastsaasma lplagatqnr vpsseaffkp lpvkpwramg gvkrpngrlq vkagvssfke
       61 kavtgltaaa lttsmmmpqm aqaadgvtps lknfllsiaa ggvvlvaivg avigvsnfdp
      121 vkrs
//
LOCUS       XP_016673801             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673801
VERSION     XP_016673801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12495
     Region          1..123
                     /region_name="PLN00088"
                     /note="predicted protein; Provisional"
                     /db_xref="CDD:177709"
     Region          87..123
                     /region_name="PsbX"
                     /note="Photosystem II reaction centre X protein (PsbX);
                     pfam06596"
                     /db_xref="CDD:429023"
     CDS             1..124
                     /gene="LOC107893351"
                     /coded_by="XM_016818312.2:554..928"
                     /db_xref="GeneID:107893351"
ORIGIN      
        1 mastsaasma lplagatqnr mpsseaffkp lpvkpwratg gvkrpngklq vkagassfke
       61 kavtgltata lttsmmipev aqaadgvtps lknfllsiva ggvvlvaivg avigvsnfdp
      121 vkrt
//
LOCUS       XP_016673797             372 aa            linear   PLN 06-AUG-2024
DEFINITION  protein Brevis radix-like 4 [Gossypium hirsutum].
ACCESSION   XP_016673797
VERSION     XP_016673797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="protein Brevis radix-like 4"
                     /calculated_mol_wt=41853
     Region          23..60
                     /region_name="BRX_N"
                     /note="Transcription factor BRX N-terminal domain;
                     pfam13713"
                     /db_xref="CDD:404581"
     Region          138..193
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     Region          316..371
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     CDS             1..372
                     /gene="LOC107893349"
                     /coded_by="XM_016818308.2:156..1274"
                     /db_xref="GeneID:107893349"
ORIGIN      
        1 mltciarskq pgddlpsqle etdssatssa kqnqaikslt sqfkdmalka sgvyrhcnpc
       61 taqsqlrnsg esdaesdrsk wsyrrtgsss sttprawgre mearlkgisi sssseeatpk
      121 sasgrriqsv vfveesepke weaqvepgvl itfvslphgg ndlkrirfsr emfnkwqaqr
      181 wwaenydrvm elynvqrlhr qafplptppr sedesskmes aeespvtppl tkervprnly
      241 rpagmgmgys ssdsldqhpm qarhycdsgl tstpkvssis gakteissmd asmrssssre
      301 adqsgelsis nasdletewv eqdepgvyit iralpggkre lrrvrfsrei fgemharlww
      361 eenrariheq yl
//
LOCUS       XP_016673799             372 aa            linear   PLN 06-AUG-2024
DEFINITION  protein Brevis radix-like 4 [Gossypium hirsutum].
ACCESSION   XP_016673799
VERSION     XP_016673799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="protein Brevis radix-like 4"
                     /calculated_mol_wt=41853
     Region          23..60
                     /region_name="BRX_N"
                     /note="Transcription factor BRX N-terminal domain;
                     pfam13713"
                     /db_xref="CDD:404581"
     Region          138..193
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     Region          316..371
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     CDS             1..372
                     /gene="LOC107893349"
                     /coded_by="XM_016818310.2:156..1274"
                     /db_xref="GeneID:107893349"
ORIGIN      
        1 mltciarskq pgddlpsqle etdssatssa kqnqaikslt sqfkdmalka sgvyrhcnpc
       61 taqsqlrnsg esdaesdrsk wsyrrtgsss sttprawgre mearlkgisi sssseeatpk
      121 sasgrriqsv vfveesepke weaqvepgvl itfvslphgg ndlkrirfsr emfnkwqaqr
      181 wwaenydrvm elynvqrlhr qafplptppr sedesskmes aeespvtppl tkervprnly
      241 rpagmgmgys ssdsldqhpm qarhycdsgl tstpkvssis gakteissmd asmrssssre
      301 adqsgelsis nasdletewv eqdepgvyit iralpggkre lrrvrfsrei fgemharlww
      361 eenrariheq yl
//
LOCUS       XP_016673800             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016673800
VERSION     XP_016673800.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818311.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12569
     Region          <48..123
                     /region_name="PLN00088"
                     /note="predicted protein; Provisional"
                     /db_xref="CDD:177709"
     CDS             1..124
                     /gene="LOC107893350"
                     /coded_by="XM_016818311.2:266..640"
                     /db_xref="GeneID:107893350"
ORIGIN      
        1 masssaasma lplagatqnr mpsseaffkp lpvkpwrsmg avkrpngrlq vkaasssfke
       61 kvvtgltaaa lttsmmipev aqaadgvtps lknfllsiaa ggvvlvalvg avigvsnfdp
      121 vkrt
//
LOCUS       XP_016673793             323 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673793
VERSION     XP_016673793.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818304.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673793.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X1"
                     /calculated_mol_wt=36021
     Region          184..245
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..323
                     /gene="LOC107893347"
                     /coded_by="XM_016818304.2:170..1141"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sagpfescek dtegqvkpvf
      121 lvnnpntlfs pshqnynhsm actqypyana yfnglftpyg pqaiiqaqlg gnaptriplp
      181 ldlaedepiy vnpkqyhgil rrrqyrakle aqnklvksrk pylhesrhrh alnrvrgsgg
      241 rflskktlqq pnvicnnqtn siseleshys rmagydgpnt scmnissvsn ndcnfqrleh
      301 gfanisragg tgdgirhgas vvq
//
LOCUS       XP_016673794             323 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673794
VERSION     XP_016673794.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818305.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673794.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X1"
                     /calculated_mol_wt=36021
     Region          184..245
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..323
                     /gene="LOC107893347"
                     /coded_by="XM_016818305.2:293..1264"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sagpfescek dtegqvkpvf
      121 lvnnpntlfs pshqnynhsm actqypyana yfnglftpyg pqaiiqaqlg gnaptriplp
      181 ldlaedepiy vnpkqyhgil rrrqyrakle aqnklvksrk pylhesrhrh alnrvrgsgg
      241 rflskktlqq pnvicnnqtn siseleshys rmagydgpnt scmnissvsn ndcnfqrleh
      301 gfanisragg tgdgirhgas vvq
//
LOCUS       XP_016673795             323 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673795
VERSION     XP_016673795.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818306.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673795.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X1"
                     /calculated_mol_wt=36021
     Region          184..245
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..323
                     /gene="LOC107893347"
                     /coded_by="XM_016818306.2:132..1103"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sagpfescek dtegqvkpvf
      121 lvnnpntlfs pshqnynhsm actqypyana yfnglftpyg pqaiiqaqlg gnaptriplp
      181 ldlaedepiy vnpkqyhgil rrrqyrakle aqnklvksrk pylhesrhrh alnrvrgsgg
      241 rflskktlqq pnvicnnqtn siseleshys rmagydgpnt scmnissvsn ndcnfqrleh
      301 gfanisragg tgdgirhgas vvq
//
LOCUS       XP_016673792             323 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673792
VERSION     XP_016673792.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818303.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673792.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X1"
                     /calculated_mol_wt=36021
     Region          184..245
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..323
                     /gene="LOC107893347"
                     /coded_by="XM_016818303.2:181..1152"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sagpfescek dtegqvkpvf
      121 lvnnpntlfs pshqnynhsm actqypyana yfnglftpyg pqaiiqaqlg gnaptriplp
      181 ldlaedepiy vnpkqyhgil rrrqyrakle aqnklvksrk pylhesrhrh alnrvrgsgg
      241 rflskktlqq pnvicnnqtn siseleshys rmagydgpnt scmnissvsn ndcnfqrleh
      301 gfanisragg tgdgirhgas vvq
//
LOCUS       XP_040941578             323 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941578
VERSION     XP_040941578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085644.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X1"
                     /calculated_mol_wt=36021
     Region          184..245
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..323
                     /gene="LOC107893347"
                     /coded_by="XM_041085644.1:210..1181"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sagpfescek dtegqvkpvf
      121 lvnnpntlfs pshqnynhsm actqypyana yfnglftpyg pqaiiqaqlg gnaptriplp
      181 ldlaedepiy vnpkqyhgil rrrqyrakle aqnklvksrk pylhesrhrh alnrvrgsgg
      241 rflskktlqq pnvicnnqtn siseleshys rmagydgpnt scmnissvsn ndcnfqrleh
      301 gfanisragg tgdgirhgas vvq
//
LOCUS       XP_016673796             322 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673796
VERSION     XP_016673796.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818307.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673796.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X2"
                     /calculated_mol_wt=35950
     Region          183..244
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..322
                     /gene="LOC107893347"
                     /coded_by="XM_016818307.2:161..1129"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sgpfescekd tegqvkpvfl
      121 vnnpntlfsp shqnynhsma ctqypyanay fnglftpygp qaiiqaqlgg naptriplpl
      181 dlaedepiyv npkqyhgilr rrqyraklea qnklvksrkp ylhesrhrha lnrvrgsggr
      241 flskktlqqp nvicnnqtns iseleshysr magydgpnts cmnissvsnn dcnfqrlehg
      301 fanisraggt gdgirhgasv vq
//
LOCUS       XP_040941580             322 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941580
VERSION     XP_040941580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085646.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X2"
                     /calculated_mol_wt=35950
     Region          183..244
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..322
                     /gene="LOC107893347"
                     /coded_by="XM_041085646.1:171..1139"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sgpfescekd tegqvkpvfl
      121 vnnpntlfsp shqnynhsma ctqypyanay fnglftpygp qaiiqaqlgg naptriplpl
      181 dlaedepiyv npkqyhgilr rrqyraklea qnklvksrkp ylhesrhrha lnrvrgsggr
      241 flskktlqqp nvicnnqtns iseleshysr magydgpnts cmnissvsnn dcnfqrlehg
      301 fanisraggt gdgirhgasv vq
//
LOCUS       XP_040941581             322 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941581
VERSION     XP_040941581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085647.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X2"
                     /calculated_mol_wt=35950
     Region          183..244
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..322
                     /gene="LOC107893347"
                     /coded_by="XM_041085647.1:144..1112"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sgpfescekd tegqvkpvfl
      121 vnnpntlfsp shqnynhsma ctqypyanay fnglftpygp qaiiqaqlgg naptriplpl
      181 dlaedepiyv npkqyhgilr rrqyraklea qnklvksrkp ylhesrhrha lnrvrgsggr
      241 flskktlqqp nvicnnqtns iseleshysr magydgpnts cmnissvsnn dcnfqrlehg
      301 fanisraggt gdgirhgasv vq
//
LOCUS       XP_040941582             322 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941582
VERSION     XP_040941582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085648.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="nuclear transcription factor Y subunit A-7
                     isoform X2"
                     /calculated_mol_wt=35950
     Region          183..244
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..322
                     /gene="LOC107893347"
                     /coded_by="XM_041085648.1:313..1281"
                     /db_xref="GeneID:107893347"
ORIGIN      
        1 mavrvqnfpk ktfdessvrs lshlsvsctp wwslneqqie eplphnislk vetpsqlyhq
       61 akhldlqlpd qelttvqaid rthcevgaig vtssqrdpse sgpfescekd tegqvkpvfl
      121 vnnpntlfsp shqnynhsma ctqypyanay fnglftpygp qaiiqaqlgg naptriplpl
      181 dlaedepiyv npkqyhgilr rrqyraklea qnklvksrkp ylhesrhrha lnrvrgsggr
      241 flskktlqqp nvicnnqtns iseleshysr magydgpnts cmnissvsnn dcnfqrlehg
      301 fanisraggt gdgirhgasv vq
//
LOCUS       XP_016673790             312 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha/beta hydrolase domain-containing protein WAV2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016673790
VERSION     XP_016673790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818301.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..312
                     /product="alpha/beta hydrolase domain-containing protein
                     WAV2 isoform X1"
                     /calculated_mol_wt=34674
     Region          47..297
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..312
                     /gene="LOC107893345"
                     /coded_by="XM_016818301.2:159..1097"
                     /db_xref="GeneID:107893345"
ORIGIN      
        1 mvsyvsvlly gvggmvmagm allvafqekl vyvpvlpglt ksypitparl glvyedvwlr
       61 sldgirlhaw fiklfpecrg ptilffqena gniahrlemv rimlqrlqcn vfmlsyrgyg
      121 asdgypsqhg iindaqaald hlsqrtdidt drivvfgrsl ggavgsvltk nnpdkvaami
      181 lentftsild magvllpflk wfiggpgtkg pkilnflvrs pwstidiigq vkqpilflsg
      241 lqdemvppsh mqmlyakaaa hnrqcilvef ptgmhmdtwl sggdhywkti qqffekhvpk
      301 tgygidsqrr gd
//
LOCUS       XP_016673791             310 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha/beta hydrolase domain-containing protein WAV2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016673791
VERSION     XP_016673791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818302.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..310
                     /product="alpha/beta hydrolase domain-containing protein
                     WAV2 isoform X2"
                     /calculated_mol_wt=34503
     Region          47..297
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..310
                     /gene="LOC107893345"
                     /coded_by="XM_016818302.2:159..1091"
                     /db_xref="GeneID:107893345"
ORIGIN      
        1 mvsyvsvlly gvggmvmagm allvafqekl vyvpvlpglt ksypitparl glvyedvwlr
       61 sldgirlhaw fiklfpecrg ptilffqena gniahrlemv rimlqrlqcn vfmlsyrgyg
      121 asdgypsqhg iindaqaald hlsqrtdidt drivvfgrsl ggavgsvltk nnpdkvaami
      181 lentftsild magvllpflk wfiggpgtkg pkilnflvrs pwstidiigq vkqpilflsg
      241 lqdemvppsh mqmlyakaaa hnrqcilvef ptgmhmdtwl sggdhywkti qqffekhvpk
      301 tgydsqrrgd
//
LOCUS       XP_016673789             254 aa            linear   PLN 06-AUG-2024
DEFINITION  PHD finger protein ALFIN-LIKE 5 [Gossypium hirsutum].
ACCESSION   XP_016673789
VERSION     XP_016673789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818300.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..254
                     /product="PHD finger protein ALFIN-LIKE 5"
                     /calculated_mol_wt=28361
     Region          12..139
                     /region_name="Alfin"
                     /note="pfam12165"
                     /db_xref="CDD:463480"
     Region          200..250
                     /region_name="PHD_AL_plant"
                     /note="PHD finger found in plant Alfin1-like (AL)
                     proteins; cd15613"
                     /db_xref="CDD:277085"
     Site            order(213..218,221,223,226)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277085"
     CDS             1..254
                     /gene="LOC107893344"
                     /coded_by="XM_016818300.2:337..1101"
                     /db_xref="GeneID:107893344"
ORIGIN      
        1 mdggtlhslr tveevfrdfk grragiikal tadvgeffeq cdpekenlcl yglpteqwev
       61 tlpaeevppe lpepalginf ardgmqekdw lalvavhsda wllavahyfg arfgfdkadr
      121 krlftmindf ptifeivsgs akkqtkekss vsnhssnksk ssgkargses akysksvqlk
      181 deeegldeev eveeehgdtl cgacgenyas defwiccdic ekwfhgkcvk itparaehik
      241 qykcpscsnk rarp
//
LOCUS       XP_016673786            1264 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Gossypium hirsutum].
ACCESSION   XP_016673786
VERSION     XP_016673786.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818297.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673786.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1264
                     /product="protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1"
                     /calculated_mol_wt=138503
     Region          93..240
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          <1204..1262
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
     CDS             1..1264
                     /gene="LOC107893343"
                     /coded_by="XM_016818297.2:235..4029"
                     /db_xref="GeneID:107893343"
ORIGIN      
        1 mmlskaeark knggnssngk llneietmsk alyldknrss nsfsafnsrs kptwktnlpe
       61 pkstvknsne dpllkekksv wnwkplkvfs nvrnrrfncc fslevhsiec lpvsfndlsl
      121 fvhwkrrdgd lttrpskvfn gtvefreklt ytcsiygvrs glsakyeakh cmlfasvlgt
      181 pdfdlgkhrv dltrllpltl eeleeekstg kwttsfklsg kakgatmnvs fgymvvgdns
      241 vllknnqhra elshikqnnq stgkavagfd hidlvttrcv eslpslvntr pfgsspvvee
      301 ikdlhevlsv pkselnvknt vdqkldeekp dasasskpep dvlnehfvpi rppaslases
      361 ineyiekene dndfsvdkkg ielsseeqar seevtfvatl enpqvveinp gmgvnfeecs
      421 qlhpsnqgea rleegtlvat lstvenpqvv einpgvgenf eecsqlhpsn qgearseevs
      481 laatlstvet pqvdeinpgv genfeecsql hpsnqgears eevslaatls tvetsqvdei
      541 npgvgenfee csqlhisnqg dmlvvqdrss eedeqcsnes lmreldlald gvtnlgeala
      601 sspgledped ymdnkgdyka kslgldeate svatdflnml gidhsllgls sesepespre
      661 rllrqfekdt lasgcslfdf dmadeeeles gfdtstasgw gsltesfdls sfiqdaeqey
      721 qketggrnkt rakvledles ealmrewgln ekafqqsrsg ssvgfgspgd lppedplelp
      781 plgdglgpfl qtknggflrs mnpslfrdak sggnlimqvs npvvvpaemg sgimdilqql
      841 asvgieklsm qanklmpled itgktmeqva weaapalegp erqcslqhdf evgedmssrq
      901 kkvkrrstrp sssdlnstsv nemgsdyval edlaplamdk iealsmeglr iqsgmsdeda
      961 psnisarsfg eisalqgkgf gisgslgldg taglqlldik dsgdnvdglm glsltldewm
     1021 rldsgdidde dqisertski laahhatsld sicrgskgek krgkkcgllg nnftvalmvq
     1081 lrdtmrnyep vgapmlaliq vervfvppkp kiyatvsals ndnqddddse aatkekvkpe
     1141 emkeekasqe egipqyritd vhvaglktep skkklwgsta qqqsgsrwll angmgksnkh
     1201 pllkskpgfk sstpsttkvq pgdtlwsiss rihgtgakwk elaalnphir npnvilpnet
     1261 iryr
//
LOCUS       XP_016673787            1264 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Gossypium hirsutum].
ACCESSION   XP_016673787
VERSION     XP_016673787.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673787.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1264
                     /product="protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1"
                     /calculated_mol_wt=138503
     Region          93..240
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          <1204..1262
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
     CDS             1..1264
                     /gene="LOC107893343"
                     /coded_by="XM_016818298.2:200..3994"
                     /db_xref="GeneID:107893343"
ORIGIN      
        1 mmlskaeark knggnssngk llneietmsk alyldknrss nsfsafnsrs kptwktnlpe
       61 pkstvknsne dpllkekksv wnwkplkvfs nvrnrrfncc fslevhsiec lpvsfndlsl
      121 fvhwkrrdgd lttrpskvfn gtvefreklt ytcsiygvrs glsakyeakh cmlfasvlgt
      181 pdfdlgkhrv dltrllpltl eeleeekstg kwttsfklsg kakgatmnvs fgymvvgdns
      241 vllknnqhra elshikqnnq stgkavagfd hidlvttrcv eslpslvntr pfgsspvvee
      301 ikdlhevlsv pkselnvknt vdqkldeekp dasasskpep dvlnehfvpi rppaslases
      361 ineyiekene dndfsvdkkg ielsseeqar seevtfvatl enpqvveinp gmgvnfeecs
      421 qlhpsnqgea rleegtlvat lstvenpqvv einpgvgenf eecsqlhpsn qgearseevs
      481 laatlstvet pqvdeinpgv genfeecsql hpsnqgears eevslaatls tvetsqvdei
      541 npgvgenfee csqlhisnqg dmlvvqdrss eedeqcsnes lmreldlald gvtnlgeala
      601 sspgledped ymdnkgdyka kslgldeate svatdflnml gidhsllgls sesepespre
      661 rllrqfekdt lasgcslfdf dmadeeeles gfdtstasgw gsltesfdls sfiqdaeqey
      721 qketggrnkt rakvledles ealmrewgln ekafqqsrsg ssvgfgspgd lppedplelp
      781 plgdglgpfl qtknggflrs mnpslfrdak sggnlimqvs npvvvpaemg sgimdilqql
      841 asvgieklsm qanklmpled itgktmeqva weaapalegp erqcslqhdf evgedmssrq
      901 kkvkrrstrp sssdlnstsv nemgsdyval edlaplamdk iealsmeglr iqsgmsdeda
      961 psnisarsfg eisalqgkgf gisgslgldg taglqlldik dsgdnvdglm glsltldewm
     1021 rldsgdidde dqisertski laahhatsld sicrgskgek krgkkcgllg nnftvalmvq
     1081 lrdtmrnyep vgapmlaliq vervfvppkp kiyatvsals ndnqddddse aatkekvkpe
     1141 emkeekasqe egipqyritd vhvaglktep skkklwgsta qqqsgsrwll angmgksnkh
     1201 pllkskpgfk sstpsttkvq pgdtlwsiss rihgtgakwk elaalnphir npnvilpnet
     1261 iryr
//
LOCUS       XP_016673784             387 aa            linear   PLN 06-AUG-2024
DEFINITION  glycerophosphocholine acyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016673784
VERSION     XP_016673784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..387
                     /product="glycerophosphocholine acyltransferase 1"
                     /calculated_mol_wt=45025
     Region          71..177
                     /region_name="DUF2838"
                     /note="Protein of unknown function (DUF2838); pfam10998"
                     /db_xref="CDD:463204"
     CDS             1..387
                     /gene="LOC107893342"
                     /coded_by="XM_016818295.2:103..1266"
                     /db_xref="GeneID:107893342"
ORIGIN      
        1 msssdefmdd mngngdlygt vnrrfkdrae qvaktkeils kqavqtkeml skqavkiakq
       61 aeeherfink vthllgvlgf ggfcfllgar pqdipyvycv fyvtfvplrw iyyrfkkwhy
      121 ylldfcyyan tiflvdllly pkneklfmic fsfaegplaw alivwrcslv fssmdkiisv
      181 lihllpgivf ftirwwnpat feamhpegtp hrfswpyved ksylwtwlfg vplaaytlwq
      241 vlyflivnvl rrqrllrdpe vmtsyrelsk kaqkanniww rlsgllgdqn rllmyillqa
      301 vftvatmalt vpiflsyefh aifqilkvsa svwnggsfll evmprqvivk ekkksgnqvp
      361 cqqedqhsdl tenamqangs svthqse
//
LOCUS       XP_016673783            1530 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-17 [Gossypium hirsutum].
ACCESSION   XP_016673783
VERSION     XP_016673783.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673783.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1530
                     /product="myosin-17"
                     /calculated_mol_wt=172425
     Region          9..52
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          76..720
                     /region_name="MYSc_Myo11"
                     /note="class XI myosin, motor domain; cd01384"
                     /db_xref="CDD:276835"
     Site            order(103..112,156..163,204..214,434..439)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276835"
     Site            103..112
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276835"
     Site            156..163
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276835"
     Site            204..214
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276835"
     Site            434..439
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276835"
     Site            order(463..474,477..486)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276835"
     Site            655..664
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276835"
     Site            order(667..686,709..720)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276835"
     Region          <725..>1055
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1113..1496
                     /region_name="MyosinXI_CBD"
                     /note="cargo binding domain of myosin XI; cd15475"
                     /db_xref="CDD:271259"
     CDS             1..1530
                     /gene="LOC107893341"
                     /coded_by="XM_016818294.2:481..5073"
                     /db_xref="GeneID:107893341"
ORIGIN      
        1 maapvniivg shvwvedptl awidgevfki sgedvhvqtt ngktavanis kvfpkdteap
       61 pggvddmtkl sylhepgvlh nlamryelne iytytgnili ainpfqrlph lydthmmeqy
      121 kgagfgelsp hvfavadvay raminegksn silvsgesga gktettkmlm rylaylggrs
      181 gvegrtveqq vlesnpvlea fgnaktvrnn nssrfgkfve lqfdkngris gaavrtylle
      241 rsrvcqisnp ernyhcfyll caappevrek fklgdpksfh ylnqsscyal dgvddaqeyl
      301 atiramdvvg iseeeqegif svvaailhlg nidfskgaev dssvikdeks rfhlnttael
      361 lqcdvkslen alikrvmvtp eeiitraldp vaavgsrdal aktiysrlfd wlvdkinisi
      421 gqdpnskqli gvldiygfes fkfnsfeqfc inftneklqq hfnqhvfkme qeeytkeein
      481 wsyiefvdnq dvldliekkp ggiialldea cmfprsthet faqklfqtfk nnkrfikpkl
      541 srtsftishy agevtyladl fldknkdyvv aehqdlltas kcsfvaslfp ppaeesskss
      601 kfssigsrfk lqlqslmetl nstephyirc vkpnnvlkpa ifenaniiqq lrcggvleai
      661 riscagyptr rtfyefihrf gvlapeileg nhddkvacqm ildkmglkgy qigktkvflr
      721 agqmaeldar raevlgnaar tiqrlirtyi arkefmalrk saimlqshwr gllacklyeq
      781 lrreaaalki qknfrrhiar esyltvrlaa itlqtglram tarnefrfkk qtkaaiivqa
      841 alrchlaysy ykslqkaalt tqcgwrgrva rrelrklkma aretgalkea kdklekrvee
      901 ltwrlqlekr lrtdleeeka qelaklqdal hamqvqveea narvkkeqea arkaieeapp
      961 viketpiivq dtekvnslaa eveslkasll serkaaeear nactdvears aelqkkleds
     1021 erkvdqlqes mqrleeklan seseiqvlrq qalaisptgk slttrqrtmi iprtpengnv
     1081 tngetkvspd ttlaisnvre peseekpqks lnekqqenqd ilikcisenl gfsgskpiaa
     1141 cviykcllqw rsfevertti fdriiqtias sieiqdnndv laywlsnsst lllllqrtlk
     1201 angagsltpq rrratsaslf grvsqglras pqsgglsfln grglsrlddl rqveakypal
     1261 lfkqqltafl ekiygtirdn lkkeispllg lciqaprtsr aslvkgrsqa naaaqqalia
     1321 hwqsivksln ryldimkanh vppflvrkvf tqifsfinvq lfnslllrre ccsfsngeyv
     1381 kaglaeleqw cyaateeyag paweelkhir qavgflvihq kpkktlneit kelcpvlsiq
     1441 qlyristmyw ddkygthsvs sdvianmrvm mtedsnnavs ssflldddss ipftvedisk
     1501 slqkvdisdv dppsiirens gfgfllprsd
//
LOCUS       XP_016673782             491 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALP1-like [Gossypium hirsutum].
ACCESSION   XP_016673782
VERSION     XP_016673782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..491
                     /product="protein ALP1-like"
                     /calculated_mol_wt=55936
     Region          277..434
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..491
                     /gene="LOC107893338"
                     /coded_by="XM_016818293.2:109..1584"
                     /db_xref="GeneID:107893338"
ORIGIN      
        1 memgsftfls qqefsynnss fdffeemeng fngnskkmsr rvsddslvne enngfkdlls
       61 llldegakqe qeqhqwltgf etffeaeaki eeingfemee elgnsrkkra rksgsiagts
      121 stvsassdnt gggsehqrrl wvksrskdww ekcnhpdfpd eefkrefrms khtfdmicee
      181 lepavmkknt mlrdaipvrq rvavciwrla tgeplrtvsk qfglgistch klvlevctai
      241 ktvlmpkyiq wpdenkikql khefesiagi pnvcgsmytt hipisapktn vaayfnkkht
      301 eryqktsysi tlqgiidstg vftdvcigwp gsmsdeqvls nsafhqratm gqlkdfwvvg
      361 gkmyplmdwv lvpythqnlt waqhafneki yeieklgkea fgrlkgrwai lqkrmeiklq
      421 elpavlgacc vlhnicemkq eemegelkfe vfddeviaen nlrsmataqa rdsiahnllh
      481 hgvggnpgfl l
//
LOCUS       XP_016673781             434 aa            linear   PLN 06-AUG-2024
DEFINITION  glycylpeptide N-tetradecanoyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016673781
VERSION     XP_016673781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..434
                     /product="glycylpeptide N-tetradecanoyltransferase 1"
                     /calculated_mol_wt=49815
     Region          26..434
                     /region_name="NMT1"
                     /note="N-myristoyl transferase [Lipid metabolism];
                     COG5092"
                     /db_xref="CDD:227423"
     CDS             1..434
                     /gene="LOC107893337"
                     /coded_by="XM_016818292.2:337..1641"
                     /db_xref="GeneID:107893337"
ORIGIN      
        1 mtdgnpppgs skenpdpnpe anpfsnddss lesivrrfqd smssvkrhkf wetqpvgqfk
       61 dvgdtslpdg sielptplse vkqepynlps pyewttcdmd seetctevyi llknnyvedd
      121 enlfrfnysk eflrwalrpp gyykswhigv rakaskklva fitgvparir vrneivkmae
      181 inflcvhkkl rskrlapvmi kevtrrvhle niwqaaytag vvlptpittc qywhrslnpk
      241 klievgfsrl garmtmsrti klyklpdspv tpgfrkmelr dvsavtrllr nylsqfvvsp
      301 dfdendvqhw llptedvvds ylvespethd itdfcsfytl pssilgnqny silkaaysyy
      361 nvstktpllq lmndalivan rkdfdvfnal dvmhnesflk elkfgpgdgq lhyylynyri
      421 rnalrpselg lvll
//
LOCUS       XP_016673780             465 aa            linear   PLN 06-AUG-2024
DEFINITION  casein kinase 1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016673780
VERSION     XP_016673780.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818291.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..465
                     /product="casein kinase 1-like protein 1"
                     /calculated_mol_wt=52005
     Region          8..281
                     /region_name="STKc_CK1_delta_epsilon"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; cd14125"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,88,90,128,130,132..133,135,
                     149,152,174..177)
                     /site_type="active"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,130,132..133,135,149)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271027"
     Site            order(19,88,90,128,130,132,152,174..177)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271027"
     Site            order(148..158,160..177)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271027"
     CDS             1..465
                     /gene="LOC107893336"
                     /coded_by="XM_016818291.2:568..1965"
                     /db_xref="GeneID:107893336"
ORIGIN      
        1 meprvgnkfr lgrkigsgsf geiylgtniq tneevaikle nvktkhpqll yesklyrilq
       61 ggtgipnvrw fgvegdynvm vmdllgpsle dlfnfcsrkl slksvlmlad qminrvefvh
      121 sksflhrdik pdnfimglgr ranqvymidf glakkyrdss hqhipyrenk nltgtaryas
      181 mnthlgieqs rrddleslgy vlmyflrgsl pwqglkagtk kqkyekisek kvstsiealc
      241 rgyptefasy fhycrslrfd dkpdysylkr ifrdlfireg fqfdyvfdwt ilkyqqsqlt
      301 tpparalgpg agtsaamppa fanadrqaag dnlraaglss mnssrrktsg plnsgshakq
      361 kgpvandpai tkdamymgqs ggsssrhiag sreafagsea dpqrsrttda shgglnrnss
      421 rqspvessdp krassmrnts haknyeaalk gmeglqfgsd erihy
//
LOCUS       XP_016673778             456 aa            linear   PLN 06-AUG-2024
DEFINITION  IQ domain-containing protein IQM1 [Gossypium hirsutum].
ACCESSION   XP_016673778
VERSION     XP_016673778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818289.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..456
                     /product="IQ domain-containing protein IQM1"
                     /calculated_mol_wt=51355
     CDS             1..456
                     /gene="LOC107893335"
                     /coded_by="XM_016818289.2:1155..2525"
                     /db_xref="GeneID:107893335"
ORIGIN      
        1 mtnsvesdef qrkdsrtlrd gthdhevvlk ktfsfkdlvi dkgkfgltvs nsngllhepf
       61 stlslpepti lfsprpvsel deaavklqkv ykgyrtrrnl adcavvveel wwkvldlael
      121 kqssvsffdv kkpesmvsrw araktraakv gkglskdeka qklalqhwle aidprhrygh
      181 nlnlyydvwf ssestqpffy wldigdgkel nlgkcprkkl lqqcitylgp kereeyevii
      241 engklvfkqs gllvdttggf kwifvlsttr alyvgqkekg kfqhssflag gattaagrlv
      301 acdgvleaiw pysghyhpte ehfmefinfl genhvnltnv krcatdddyy gqasanepkp
      361 kelmegtele ppmfnpgnrl sckwttgvgp riscvrdypt elqfkaleqv nmsprvapsv
      421 vnhgpipspr pspkmhispr iatmglpspr sistsn
//
LOCUS       XP_016673776             419 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein recA homolog 3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016673776
VERSION     XP_016673776.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818287.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673776.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="DNA repair protein recA homolog 3,
                     mitochondrial"
                     /calculated_mol_wt=45165
     Region          56..402
                     /region_name="recA"
                     /note="recombinase A; Provisional; PRK09354"
                     /db_xref="CDD:236476"
     CDS             1..419
                     /gene="LOC107893333"
                     /coded_by="XM_016818287.2:276..1535"
                     /db_xref="GeneID:107893333"
ORIGIN      
        1 marflrnish lkhsfhapqi crggvlgsys qlcnfsskgr rksksdgsds geeniskkdl
       61 alkqaldqit ssfgkgsimw lgrsesprnv pvvstgsfal dvalgigglp kgrvveiygp
      121 easgkttlal hviaeaqkqg gycvfvdaeh aldpalaeti gvntenllls qpdcgeqals
      181 lvdtlirsgs vdvvvvdsva alvpkgeldg emgdahmamq arlmsqalrk lshslslsqt
      241 ilifinqvrs klstfgfggp tevtcggnal kfyasvrlni rrtglvkkge etigsqvlvk
      301 vvknkhappf knaefelefg kgicregeii nlatkhkfvt kagsfytfnd qkihgkeafk
      361 nflvenesar eelatklrek llepenkker qgdisdgdas eeiistdttd eeavtaiea
//
LOCUS       XP_016673774             526 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin dehydrogenase 3 [Gossypium hirsutum].
ACCESSION   XP_016673774
VERSION     XP_016673774.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818285.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..526
                     /product="cytokinin dehydrogenase 3"
                     /calculated_mol_wt=59708
     Region          3..525
                     /region_name="PLN02441"
                     /note="cytokinin dehydrogenase"
                     /db_xref="CDD:215242"
     CDS             1..526
                     /gene="LOC107893332"
                     /coded_by="XM_016818285.2:114..1694"
                     /db_xref="GeneID:107893332"
ORIGIN      
        1 mvmsfqfpay ftaifiitrv msimkiskpl dvhhkdirav dlatklsvdp saiesasrdf
       61 ggivkaepea vlhpsapqdi aalikfsysn svpfgiaakg hghsvrgqam aengvvvdmr
      121 smankrrngt girvsidrly advggeqlwi dvlnatleyg lapvswtdyl yltvggtlsn
      181 agisgqtfry gpqisnvlem dvitgkadfl tcsprmnsel fyavlgglgq fgiitrarip
      241 lqpapkrvkw vrllyddfss ftkdqellis kngrkdksal dylegsllmd qgspdnwrss
      301 ffpykdhpki islitkhgii ycleivkhyd drtkhtvdke meqvlqgmny mpgfifgkdv
      361 gyeeflnrvr sgelklksqg lwdvphpwln lfipksqisd fnngvfrgiv lernittgpv
      421 lvypmnrqkw ddrmsavipd eeifytvgfl hlsgfdtwka fedqnkdimr fcnktgimlk
      481 qylphystke ewvhhfgskw kvfqhrkyqf dprmllspgq rifnnn
//
LOCUS       XP_016675501             266 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-associated molecular patterns-induced protein A70
            [Gossypium hirsutum].
ACCESSION   XP_016675501
VERSION     XP_016675501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820012.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..266
                     /product="pathogen-associated molecular patterns-induced
                     protein A70"
                     /calculated_mol_wt=30028
     Region          <11..34
                     /region_name="DUF4408"
                     /note="Domain of unknown function (DUF4408); pfam14364"
                     /db_xref="CDD:405114"
     Region          233..264
                     /region_name="DUF761"
                     /note="Cotton fibre expressed protein; pfam05553"
                     /db_xref="CDD:461675"
     CDS             1..266
                     /gene="LOC107894801"
                     /coded_by="XM_016820012.2:102..902"
                     /db_xref="GeneID:107894801"
ORIGIN      
        1 mfsdmsnlpe twlspttlfl flnimvgmif ficritphkt pydaddgnss ssssspsldr
       61 slslfglvts fnfstysfpi ssqdvnhhfl qtddgspahr verapsiler vkskfykysp
      121 qspetdciep aqqslisqap sllervksfy kpdtvkpnet eptvtdpngs gtglssvhge
      181 ikriqsepmv rqtelpekmk ksrrkaekem emkrsaytgi ekttpfeddd hgvdakaddf
      241 iekfkqqlkl qrlnsllryr dvlkgk
//
LOCUS       XP_016675503             255 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-associated molecular patterns-induced protein A70
            [Gossypium hirsutum].
ACCESSION   XP_016675503
VERSION     XP_016675503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820014.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..255
                     /product="pathogen-associated molecular patterns-induced
                     protein A70"
                     /calculated_mol_wt=28983
     Region          10..36
                     /region_name="DUF4408"
                     /note="Domain of unknown function (DUF4408); pfam14364"
                     /db_xref="CDD:405114"
     Region          222..249
                     /region_name="DUF761"
                     /note="Cotton fibre expressed protein; pfam05553"
                     /db_xref="CDD:461675"
     CDS             1..255
                     /gene="LOC107894802"
                     /coded_by="XM_016820014.2:96..863"
                     /db_xref="GeneID:107894802"
ORIGIN      
        1 mmfsgmsdlt atwlspaslf iflnitiati flisrlcphk tpyvaddyns ssspppslhr
       61 ppsflsriks fnfstyrfpl snpdidddsa ayrlerapsv lervksfnfy rysyspqspe
      121 tdciepvqqs llsrapslle rvksfykpds vkpneteltg tdsngsetgl gpvhgevkrv
      181 qseptvtqre lsekmkksrr kvekeeeeve ettpfeeedh svdakaddfi nkfkqqlklq
      241 rldsilrhrm csngk
//
LOCUS       XP_016673773              78 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 258 [Gossypium hirsutum].
ACCESSION   XP_016673773
VERSION     XP_016673773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818284.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..78
                     /product="transmembrane protein 258"
                     /calculated_mol_wt=8094
     Region          6..78
                     /region_name="Ost5"
                     /note="Oligosaccharyltransferase subunit 5; pfam05251"
                     /db_xref="CDD:461602"
     CDS             1..78
                     /gene="LOC107893331"
                     /coded_by="XM_016818284.2:311..547"
                     /db_xref="GeneID:107893331"
ORIGIN      
        1 mappakpits pvsdawyptl allmlsiglv vtasffiyea tsskrnrsla kelitggvas
       61 vflgfgslfl llsagvyv
//
LOCUS       XP_040941585             312 aa            linear   PLN 06-AUG-2024
DEFINITION  cytidine deaminase 1 [Gossypium hirsutum].
ACCESSION   XP_040941585
VERSION     XP_040941585.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085651.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..312
                     /product="cytidine deaminase 1"
                     /calculated_mol_wt=33726
     Region          1..301
                     /region_name="PLN02402"
                     /note="cytidine deaminase"
                     /db_xref="CDD:178024"
     CDS             1..312
                     /gene="LOC107893328"
                     /coded_by="XM_041085651.1:99..1037"
                     /db_xref="GeneID:107893328"
ORIGIN      
        1 mdrprfvids aeveqmakqs rqtvlhllps lvksaqalar ppisnyhvga vgvgssgrif
       61 fgvnlefpgl plnhsihaeq flitnlslna epclkflavs aapcghcrqf lqelraaadv
      121 nilitateke nenktinnrn dkdmqfapls hflphrfgpd dllekdvpll lephrnglsf
      181 csdtrngein gdgdnskyaa leaanashap ysgcpsgval vdvggkiykg symesaaynp
      241 slppvqaalv ayvasggggg yerivtavlv ekadavikqe htaklllqci spkcefkvfh
      301 cnknmlkcey qv
//
LOCUS       XP_016673770             599 aa            linear   PLN 06-AUG-2024
DEFINITION  K(+) efflux antiporter 4 [Gossypium hirsutum].
ACCESSION   XP_016673770
VERSION     XP_016673770.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818281.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673770.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..599
                     /product="K(+) efflux antiporter 4"
                     /calculated_mol_wt=64529
     Region          155..>534
                     /region_name="RosB"
                     /note="Predicted Kef-type K+ transport protein, K+/H+
                     antiporter domain [Inorganic ion transport and
                     metabolism]; COG4651"
                     /db_xref="CDD:443689"
     CDS             1..599
                     /gene="LOC107893327"
                     /coded_by="XM_016818281.2:359..2158"
                     /db_xref="GeneID:107893327"
ORIGIN      
        1 mrrrlaalff icdlfvlfgf aaafdaetls aaefnataal tnvsdprsre dsfadmidra
       61 lekefndtdq neatdpgsfn nsvagkqavl etvarvkskk netkeeksfq lhdvfyldne
      121 nraddaptli dqndnvfiis npkskypilq ldlrlisdlv vvivsatcgg iafacagqpv
      181 itgyllagsi igpggfsfvg emvqvetvaq fgvifllfal glefsttklr vvravavlgg
      241 llqiflfmcl cgitvslcgg kpsegvfvga flsmsstavv lkflmernsl salhgqvtvg
      301 ililqdcavg llfallpvlg gssgilqgvl smtkslvtli tflailtils rtcvpwflrl
      361 mislssqtne lyqlasvafc llvawcsdkl glslelgsfa agvmisttdl gqhtleqvep
      421 irnffaalfl asigmlihvh flwnhvdill aavilvivik tmvvaavvkg frynnktsll
      481 vgmslaqige fafvllsras nlhlvegkly llllgttals lvttpllfkl ipavvhlgvl
      541 lrwfppdiqs emgfkgdslr sdsgkqsnsl rsdsgkqsns lrsdsakrit llvqgshds
//
LOCUS       XP_016673768             487 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g15690,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016673768
VERSION     XP_016673768.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673768.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..487
                     /product="pentatricopeptide repeat-containing protein
                     At2g15690, mitochondrial"
                     /calculated_mol_wt=54631
     Region          <122..487
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          139..168
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          178..203
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          205..234
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          240..269
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          276..302
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..487
                     /gene="LOC107893325"
                     /coded_by="XM_016818279.2:171..1634"
                     /db_xref="GeneID:107893325"
ORIGIN      
        1 maslvslqns gnsisfsshl kssittnhsf plnnnklkls fsqdpnklss lctyaasdnn
       61 ktnnstrvyr rhgsnthhrl atknrpnprk lntenrnenh qspanptfqs vdvdliklcq
      121 egkvkealdc mgqgvsadyn dfgalldaca dtnslelskk vndmlrrskf agdidlnnkl
      181 isvygkcasm rdarrvfdkm rernlaswkl mingyaangn gadglllfee mrnggfqpdn
      241 etflavlsac asagdveegv kyfelmkney sialgiehyi gvisvfgeag hlneavefie
      301 nmpieptiei wqairgfari hgdidledhv delllefdps issenelrvp tkkkhstinm
      361 ieeknrvsdy kcinpfkgeg nekfkglngq mreagyvpdt ryvlhdidqe akeqalqyhs
      421 erlaiaygli stpartplri iknlricgdc hnaikimski vgrelivrdn krfhhfkdgk
      481 cscgdyw
//
LOCUS       XP_016673769             341 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial carrier protein CoAc2 [Gossypium hirsutum].
ACCESSION   XP_016673769
VERSION     XP_016673769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..341
                     /product="mitochondrial carrier protein CoAc2"
                     /calculated_mol_wt=37590
     Region          24..316
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..341
                     /gene="LOC107893326"
                     /coded_by="XM_016818280.2:245..1270"
                     /db_xref="GeneID:107893326"
ORIGIN      
        1 mgkkgeerem gmffdgiies mplfvkelia ggvagglakt avaplervki lfqtrraefh
       61 svglfgsfkk iaktegvmgf yrgngasvar ivpyaalhym tyeqyrrwii dsfpgigrgp
      121 vldlvagsfa ggtavlftyp ldlvrtklay qvvgppkinv kgvvnteqvy ngildcfskt
      181 yrgsglrgly rgvapslygi fpyaglkfyf yeemkrhvpd nqkknimvnl vcgsvagllg
      241 qtftypldvv rrqmqvqrll asnspelkgt metlvmiakn qgwkqlfsgl sinylkvvps
      301 vaigftvydm mksylrvpsh deavievvtn kgntqtsslh t
//
LOCUS       XP_040941586             298 aa            linear   PLN 06-AUG-2024
DEFINITION  serine acetyltransferase 5 [Gossypium hirsutum].
ACCESSION   XP_040941586
VERSION     XP_040941586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085652.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..298
                     /product="serine acetyltransferase 5"
                     /calculated_mol_wt=31701
     Region          1..298
                     /region_name="PLN02694"
                     /note="serine O-acetyltransferase"
                     /db_xref="CDD:178297"
     Site            order(164,166,181,215,245,248,250)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:100045"
     Site            order(180..181,200..201,207..208,215..216,227,242,
                     244..245,248,250,258,263)
                     /site_type="active"
                     /db_xref="CDD:100045"
     Site            order(180..181,207,215..216)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100045"
     Site            order(200..201,207..208,227,242,244..245,248,250,258,263)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:100045"
     CDS             1..298
                     /gene="LOC107894457"
                     /coded_by="XM_041085652.1:172..1068"
                     /db_xref="GeneID:107894457"
ORIGIN      
        1 mpagelryps siscpqisqa tetpmeedea wvwaqikaea rrdaelepal asylystils
       61 hsslerslaf hlgnklcsst llstllydlf lntfssdpsl raaavadlra arvrdpacvs
      121 fshcllnykg flacqahrva hklwtqsrrp lalalhsris dvfavdihpa akigkgilld
      181 hatgvviget avvgnnvsil hhvtlggtgk acgdrhpkig dgvligagat ilgnvkigeg
      241 akigagsvvl idvpprttav gnparlvggk ekpsrheecp gesmdhtsfi sewsdyii
//
LOCUS       XP_016673764             143 aa            linear   PLN 06-AUG-2024
DEFINITION  probable phospholipase A2 homolog 1 [Gossypium hirsutum].
ACCESSION   XP_016673764
VERSION     XP_016673764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..143
                     /product="probable phospholipase A2 homolog 1"
                     /calculated_mol_wt=15513
     Region          30..139
                     /region_name="PLA2_like"
                     /note="Phospholipase A2, a super-family of secretory and
                     cytosolic enzymes; the latter are either Ca dependent or
                     Ca independent. PLA2 cleaves the sn-2 position of the
                     glycerol backbone of phospholipids (PC or
                     phosphatidylethanolamine), usually in a...; cl05417"
                     /db_xref="CDD:471240"
     Site            order(52,54,56,77)
                     /site_type="other"
                     /note="primary metal binding site"
                     /db_xref="CDD:153092"
     Site            order(76,114)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:153092"
     CDS             1..143
                     /gene="LOC107893322"
                     /coded_by="XM_016818275.2:138..569"
                     /db_xref="GeneID:107893322"
ORIGIN      
        1 mlpnavrfvt kftfiyvflt vsavsainds qvcsrtcvae ncdtvairyg kycgvgwsgc
       61 pgekpcddld acckihdecv gnkglidvec hedfkvcitk vqesgkvgfs rkcpinmvvp
      121 amikgidmai llsqlgntky del
//
LOCUS       XP_016673766             121 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L31 [Gossypium hirsutum].
ACCESSION   XP_016673766
VERSION     XP_016673766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818277.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..121
                     /product="60S ribosomal protein L31"
                     /calculated_mol_wt=13907
     Region          11..92
                     /region_name="Ribosomal_L31e"
                     /note="Ribosomal protein L31e; pfam01198"
                     /db_xref="CDD:460108"
     CDS             1..121
                     /gene="LOC107893323"
                     /coded_by="XM_016818277.2:179..544"
                     /db_xref="GeneID:107893323"
ORIGIN      
        1 mvektrgrke evvtreytin lhkrlhgctf kkkapkaike irrfaekamg tkdvrvdvkl
       61 nkhiwsrgir svprrirvri arkrnddeda keelyslvsv aeipaeglkg lgtkvidddd
      121 e
//
LOCUS       XP_016673767              62 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S30 [Gossypium hirsutum].
ACCESSION   XP_016673767
VERSION     XP_016673767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818278.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..62
                     /product="40S ribosomal protein S30"
                     /calculated_mol_wt=6826
     Region          3..59
                     /region_name="Ribosomal_S30"
                     /note="Ribosomal protein S30; pfam04758"
                     /db_xref="CDD:398432"
     CDS             1..62
                     /gene="LOC107893324"
                     /coded_by="XM_016818278.2:157..345"
                     /db_xref="GeneID:107893324"
ORIGIN      
        1 mgkvhgslar agkvrgqtpk vakqdkkkkp rgraykrmqy nrrfvtavvg fgkkrgpnss
       61 ek
//
LOCUS       XP_016673761             218 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 32 homolog 2 [Gossypium
            hirsutum].
ACCESSION   XP_016673761
VERSION     XP_016673761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="vacuolar protein sorting-associated protein 32
                     homolog 2"
                     /calculated_mol_wt=24149
     Region          21..157
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..218
                     /gene="LOC107893321"
                     /coded_by="XM_016818272.2:192..848"
                     /db_xref="GeneID:107893321"
ORIGIN      
        1 mfnrlfgkpk qetnalttld klnetlemle kkekvlvrka aaevekakel akarnkraav
       61 qclkrkrlye qqieqlgnfq lrihdqmiml egakattetv dalrtgasam kamqkatnid
      121 dvdktmdein eqtenmkqiq dalstpigaa adfdedelea eleelegael eeqllqpatt
      181 apaapvqvpa grqpvrpvpq khtaeedela alqaemal
//
LOCUS       XP_016673762             218 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 32 homolog 2 [Gossypium
            hirsutum].
ACCESSION   XP_016673762
VERSION     XP_016673762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="vacuolar protein sorting-associated protein 32
                     homolog 2"
                     /calculated_mol_wt=24149
     Region          21..157
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..218
                     /gene="LOC107893321"
                     /coded_by="XM_016818273.2:146..802"
                     /db_xref="GeneID:107893321"
ORIGIN      
        1 mfnrlfgkpk qetnalttld klnetlemle kkekvlvrka aaevekakel akarnkraav
       61 qclkrkrlye qqieqlgnfq lrihdqmiml egakattetv dalrtgasam kamqkatnid
      121 dvdktmdein eqtenmkqiq dalstpigaa adfdedelea eleelegael eeqllqpatt
      181 apaapvqvpa grqpvrpvpq khtaeedela alqaemal
//
LOCUS       XP_016673763             218 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 32 homolog 2 [Gossypium
            hirsutum].
ACCESSION   XP_016673763
VERSION     XP_016673763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818274.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="vacuolar protein sorting-associated protein 32
                     homolog 2"
                     /calculated_mol_wt=24149
     Region          21..157
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..218
                     /gene="LOC107893321"
                     /coded_by="XM_016818274.2:192..848"
                     /db_xref="GeneID:107893321"
ORIGIN      
        1 mfnrlfgkpk qetnalttld klnetlemle kkekvlvrka aaevekakel akarnkraav
       61 qclkrkrlye qqieqlgnfq lrihdqmiml egakattetv dalrtgasam kamqkatnid
      121 dvdktmdein eqtenmkqiq dalstpigaa adfdedelea eleelegael eeqllqpatt
      181 apaapvqvpa grqpvrpvpq khtaeedela alqaemal
//
LOCUS       XP_016675218             333 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 20 [Gossypium hirsutum].
ACCESSION   XP_016675218
VERSION     XP_016675218.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675218.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..333
                     /product="zinc finger CCCH domain-containing protein 20"
                     /calculated_mol_wt=36888
     Region          126..146
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..333
                     /gene="LOC107894456"
                     /coded_by="XM_016819729.2:1251..2252"
                     /db_xref="GeneID:107894456"
ORIGIN      
        1 mmleetrqln ptvlvppwpy lgddlaaenn fsdngnpfyl qealaalqcy lpsdepgfes
       61 dseisglynp gspvdayscd hfrmfefkvr rcgrgrshdw tecpyahpge karrrdprkf
      121 hysgmacsdf kkgncrkgds cefahgvfec wlhparyrtl pckdgsgcrr rvcffahtpd
      181 qlrvinfads fdssppctka msfsgsppae cspsvspiaq pptintmvas lrnlrlgkvk
      241 slpssgfgsp kgsmirpsls slpstptrnl trpgigyldf ecgeefvmer vesgkhlrsk
      301 ifeklsqans lervysglvs ggpdvdwvsd lvn
//
LOCUS       XP_016673760             143 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-4 complex subunit sigma [Gossypium hirsutum].
ACCESSION   XP_016673760
VERSION     XP_016673760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..143
                     /product="AP-4 complex subunit sigma"
                     /calculated_mol_wt=16746
     Region          4..141
                     /region_name="AP4_sigma"
                     /note="AP-4 complex subunit sigma; cd14832"
                     /db_xref="CDD:341436"
     Site            order(10..11,16,63..66,89..90,93,98..102)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     Site            order(15..18,20..21,46..50,75..80,82..84,87,98,105..108,
                     112..113,116..117,120..131)
                     /site_type="other"
                     /note="putative AP-4 epsilon interface [polypeptide
                     binding]"
                     /db_xref="CDD:341436"
     Site            order(27,31,35,38,52..55)
                     /site_type="other"
                     /note="putative AP-4 mu interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     CDS             1..143
                     /gene="LOC107893318"
                     /coded_by="XM_016818271.2:230..661"
                     /db_xref="GeneID:107893318"
ORIGIN      
        1 mgirfilmvn kqgqtrlaqy yewltleerr alegeivrkc larneqqcsf vehrnykivy
       61 rryaslfflv gvdndenela ilefihllve tmdrhfgnvc eldimfhlek ahfmleemvm
      121 ngsivetska nilspiqlmd kas
//
LOCUS       XP_016675500             476 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent 6-phosphofructokinase 7 [Gossypium hirsutum].
ACCESSION   XP_016675500
VERSION     XP_016675500.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820011.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675500.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..476
                     /product="ATP-dependent 6-phosphofructokinase 7"
                     /calculated_mol_wt=52167
     Region          8..456
                     /region_name="PLN02564"
                     /note="6-phosphofructokinase"
                     /db_xref="CDD:178178"
     Site            order(104,136,167,193..195,197..198,221,223,225,266..268,
                     322,371,379)
                     /site_type="active"
                     /db_xref="CDD:238216"
     Site            order(104,136,167,193..195,197..198)
                     /site_type="other"
                     /note="ADP/pyrophosphate binding site [chemical binding]"
                     /db_xref="CDD:238216"
     Site            order(114,118,149,154,157,231,243,247,250,279..280,283,
                     313,388..389,393,400,415)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238216"
     Site            order(114,118,149..150,153..154,250,283,285,311,313..315)
                     /site_type="active"
                     /note="allosteric effector site [active]"
                     /db_xref="CDD:238216"
     Site            order(221,223,225,258,266..268,322,357,371,379)
                     /site_type="other"
                     /note="fructose-1,6-bisphosphate binding site"
                     /db_xref="CDD:238216"
     CDS             1..476
                     /gene="LOC107894800"
                     /coded_by="XM_016820011.2:78..1508"
                     /db_xref="GeneID:107894800"
ORIGIN      
        1 masaalpeis kpkivegpgg yvledvphlt dyipdlptyp nplqdnpays vvkqyfvhvd
       61 dsvpqkvvvh kddpkgihfr ragarqkvyf hsddvhaciv tcgglcpgln tvvreivcgl
      121 hhmygvkkvl gidggykgfy akntvylnpk vvndihkrgg tilgtsrggh dtskivdsiq
      181 drginqvyii ggdgtqrgaa lifeeirrrg lkvsvagipk tidndipvid ksfgfdtave
      241 eaqrainaah vesesfenci glvklmgrys gfiamyatla srdvdcclip espfylegpg
      301 glfefiekrl kedghmvivi aegagqells qsiqsttdas gnkllqdigl wisqsikdhf
      361 skqkmpinlk yidptymira vpsnasdnvy ctllaqsavh gamagytgft sglvngrhty
      421 ipfnriiekq nkvvitdrmw arllsstnqp sflrpstnlf snengsqksl dkrvth
//
LOCUS       XP_016673758             505 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial-processing peptidase subunit alpha [Gossypium
            hirsutum].
ACCESSION   XP_016673758
VERSION     XP_016673758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818269.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="mitochondrial-processing peptidase subunit
                     alpha"
                     /calculated_mol_wt=54362
     Region          65..490
                     /region_name="PqqL"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; COG0612"
                     /db_xref="CDD:440377"
     CDS             1..505
                     /gene="LOC107893316"
                     /coded_by="XM_016818269.2:262..1779"
                     /db_xref="GeneID:107893316"
ORIGIN      
        1 myraaasrlr alkgrtyhrv parfstsvaa attssssggl lgwftggqsn sipsldfplp
       61 gvalpsslpd yvepgktkit tlpnglkvas etsanpaasi glyvdcgsiy espasfgvsh
      121 llermafkst tnrshlrivr eveaiggnvq aavsreqigy tfdalktyvp emvellidcv
      181 rnpafldwev neqlqkmkee iaeaaknpqg llleaihsag yfgalansll apesavntln
      241 gtvledfile nftasrmvla asgveheell svaepllsdl snvprpqepk svytggdyrc
      301 qadlgdqthf alafelpggw hkekeaiilt vlqilmgggg sfsaggpgkg mysrlyvrvl
      361 neypqvysfs afnsiynhtg ifgiqatigs dfaptaidva vkeliavatp gqvdqiqldr
      421 akqstksail mnlesrmvas edigkqvlty gerkpveyfl kvvdeitlkd issiaqklls
      481 spltmasygn vinvpsydsv srkfk
//
LOCUS       XP_016673759             415 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat extensin-like protein 4 [Gossypium hirsutum].
ACCESSION   XP_016673759
VERSION     XP_016673759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818270.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..415
                     /product="leucine-rich repeat extensin-like protein 4"
                     /calculated_mol_wt=44893
     Region          73..>341
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..255
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..326
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..415
                     /gene="LOC107893317"
                     /coded_by="XM_016818270.2:305..1552"
                     /db_xref="GeneID:107893317"
ORIGIN      
        1 mgfcfwfflv filwqmmnvp tqaaiavggg vginignggg gggvwfgggi ninnnptpsg
       61 psvsklnnay talqawksai tddplgvlkt wngsdvcsyk gvfcsvdssn epfvvaidln
      121 hgnlqgtlvk elsfltditi fhlnsnrfsg tvpdtfndlt slqeldlsgn yfsgsfpmvt
      181 lyipnlvyld lrfnnfsgtl pedlfykrld aiflnnnqfe gelpsnfgns pasvinlann
      241 kfngnipasf gfmrsklkei lllnnqltgc ipqgvglfse mqvfdvshns lmghlpdtms
      301 cmsdievlnl ahnelsgvlp divcslrslm nltvaynffs gfgqecsksf yrdvgfdfsl
      361 ncipgrdmqr pqpqcnvipg sglsclrips pqplvcgalf enlnpnvtps sspsp
//
LOCUS       XP_016673757             131 aa            linear   PLN 06-AUG-2024
DEFINITION  profilin [Gossypium hirsutum].
ACCESSION   XP_016673757
VERSION     XP_016673757.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818268.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..131
                     /product="profilin"
                     /calculated_mol_wt=14189
     Region          1..128
                     /region_name="Profilin"
                     /note="pfam00235"
                     /db_xref="CDD:459724"
     CDS             1..131
                     /gene="LOC107893315"
                     /coded_by="XM_016818268.2:204..599"
                     /db_xref="GeneID:107893315"
ORIGIN      
        1 mswqtyvdeh lmceidgnhl ssaaivghdg siwaqssnfp qfkqeeinai mndfaepgsl
       61 aptglylggt kymviqgepg yvirgkkgsg gitikksnma lligiydepm tpgqcnmvve
      121 rlgdylieqg f
//
LOCUS       XP_016673756             354 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase 6 [Gossypium hirsutum].
ACCESSION   XP_016673756
VERSION     XP_016673756.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818267.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673756.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..354
                     /product="mitogen-activated protein kinase kinase 6"
                     /calculated_mol_wt=39743
     Region          67..333
                     /region_name="PKc_MAPKK_plant_like"
                     /note="Catalytic domain of Plant dual-specificity
                     Mitogen-Activated Protein Kinase Kinases and similar
                     proteins; cd06623"
                     /db_xref="CDD:132954"
     Site            order(75..79,83,96,98,128,144..147,150..151,154,191,
                     193..196,198,208..209,212,226..229,231,258,267)
                     /site_type="active"
                     /db_xref="CDD:132954"
     Site            order(75..79,81,83,96,98,128,144..147,150..151,153..154,
                     193,195..196,198,209)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:132954"
     Site            order(78..79,191,193..195,212,226..229,231,258,267)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:132954"
     Site            order(208..222,225..231)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:132954"
     CDS             1..354
                     /gene="LOC107893314"
                     /coded_by="XM_016818267.2:93..1157"
                     /db_xref="GeneID:107893314"
ORIGIN      
        1 mkskkplkql klavpaqetp issfltasgt fhdgdlllnq kglrliseek esrpsdakel
       61 dfefsledle tikvigkgsg gvvqlvrhkw vgrlfalkvi qmniqeeirk qivqelkinq
      121 asqcshvvvc yhsfyhngai slvleymdrg sladvirqvn tilepylavv ckqvlqglvy
      181 lhherhvihr dikpsnllvn hkgevkitdf gvsamlassm gqrdtfvgty nymsperisg
      241 stydyssdiw slgmvvleca igrfpymqse dqqswpsfye lleaivekpp ptapsdqfsp
      301 vfcsfvsaci kknpkerass ldllshpfik kfedkdidlg ilvgsleppv nypr
//
LOCUS       XP_016675217             793 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein
            glycosyltransferase subunit STT3A [Gossypium hirsutum].
ACCESSION   XP_016675217
VERSION     XP_016675217.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819728.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675217.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..793
                     /product="LOW QUALITY PROTEIN:
                     dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit STT3A"
                     /calculated_mol_wt=87675
     Region          27..446
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..793
                     /gene="LOC107894455"
                     /coded_by="XM_016819728.2:132..2513"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107894455"
ORIGIN      
        1 maapeastaa vptlytnntl rnafggvlsf fillligvla fsirlfsvik yesvihefdp
       61 yfnyrvtqfl tkkgiyexwn wfddrtwypl grviggtvyp gltltagtiw wllnslnipl
      121 svetvcvfta pifsafaswa tylltkevkg agagltsavl lamvpsyisr svagsydnea
      181 vaifaliftf ylylktlntg slfyatlnsl ayfymvcswg gytfiinlip mhvllcivtg
      241 ryssrlyiay aplvvlgtll aalvpvvgfn avmtsehfas flvfiiihvv afvyyikgil
      301 spkmfkvavt lvvtvglavc caviavlial vassptkgws grslslldpt yaskyipiia
      361 svsehqpptw psyfmdinvl aflvpagiia cflplsdass fvvlyiatsv yfsgvmvrlm
      421 lvlapaacit sgialseafd vltgsikfql pgvtsnaevd agetssdtse aqtdevkaek
      481 pddtsknrpl kkskkkerel aenppakata kakakaekkr llalpleasv isllllvvlg
      541 afyvvhsvwa aaeaysapsi vlttrsrdgl hvfddfreay awlshntdvd dkvaswwdyg
      601 yqttamanrt vivdnntwnn thiatvgtam ssperaawei fhsldvkyvl vvfggligyp
      661 sddinkflwm vrigggvfph ikepdylrdg qyridsqatp tmlnclmykl syyrfvetdg
      721 kaydrvrrte igkkyfklth feevftthhw mvriyklkpl knrirgkakk sklktsstss
      781 skrsgtkkkn pwq
//
LOCUS       XP_016673755             338 aa            linear   PLN 06-AUG-2024
DEFINITION  protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog
            [Gossypium hirsutum].
ACCESSION   XP_016673755
VERSION     XP_016673755.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818266.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..338
                     /product="protein phosphatase 1 regulatory inhibitor
                     subunit PPP1R7 homolog"
                     /calculated_mol_wt=38066
     Region          <2..>185
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          27..48
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          49..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          99..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          102..333
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          121..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..338
                     /gene="LOC107893313"
                     /coded_by="XM_016818266.2:171..1187"
                     /db_xref="GeneID:107893313"
ORIGIN      
        1 mqnqtepppe tnsdkddqam efdlssttal dltsfqlhdl dsvelpsslt eldltanrls
       61 kldprianli nlrklsfrqn liddaaiesi sswdslsgle elvlrdnklt kvpdvslfkk
      121 llvfdvsfne itslhgmskv sstlkelyvs knevtkmeei dhlhelqile lgsnrlrvme
      181 nlqnftklee lwlgrnrika inlcglkyik kislqsnrlt smigleecva leelylshng
      241 ilkmeglstl vnlrvldvss nkltsvngiq nltrledlwl ndnqiesles vaeavsgsre
      301 klttvylenn pcakspnyqa tlrqifpnie qidssifa
//
LOCUS       XP_040941588             220 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-galactosidase 1-like [Gossypium hirsutum].
ACCESSION   XP_040941588
VERSION     XP_040941588.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085654.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..220
                     /product="alpha-galactosidase 1-like"
                     /calculated_mol_wt=24975
     Region          <1..220
                     /region_name="PLN02692"
                     /note="alpha-galactosidase"
                     /db_xref="CDD:178295"
     CDS             1..220
                     /gene="LOC121212575"
                     /coded_by="XM_041085654.1:164..826"
                     /db_xref="GeneID:121212575"
ORIGIN      
        1 mskalkkagr piffslcewg emhpaewgfh vgnswrttcd itdtwesmis radqnelyaq
       61 yarpggwndp dmleignggm tkdeyivhfs lwaiskapll lgcdirnmtq etieiisnke
      121 viavnqdsyg iqarkarmhg deeiwvapls syrtvvviln rgsvrysvta fwedmgldpn
      181 tvveardlwe hktlknrfvg nittmlnphs ckmyvlnpis
//
LOCUS       XP_040941589             752 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division cycle protein 27 homolog B isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941589
VERSION     XP_040941589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085655.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..752
                     /product="cell division cycle protein 27 homolog B isoform
                     X1"
                     /calculated_mol_wt=83316
     Region          15..88
                     /region_name="ANAPC3"
                     /note="Anaphase-promoting complex, cyclosome, subunit 3;
                     pfam12895"
                     /db_xref="CDD:463743"
     Region          27..>161
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          518..752
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          528..556
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(529,532..533,536..537,539,563,566..567,570..571,
                     573..574,597,600..601,604..605,608)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          561..591
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          596..622
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          630..657
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          664..689
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          698..726
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..752
                     /gene="LOC107893311"
                     /coded_by="XM_041085655.1:106..2364"
                     /db_xref="GeneID:107893311"
ORIGIN      
        1 meailtdcvq nslrhfmfkn aiffcerlca efpsevnlql laasylqnnq aysayhilkg
       61 mqtsqsrylf aiscfqmdll neaettlcps nepggeipng aaghyllgli yrytdrkrsa
      121 ihhfrlalsi dpllwsayee lcilgaaeea tvvfgeaaal ciekqyfyhg laspnlhvas
      181 egcnlvssrn fssedvsrrq lkntqvnslr dipsnhhgaa isasqphngg psnislyntp
      241 spvasqlsgv vppplcrnaq pngsnlntvn adgspksvvn slvqaprrkf vdegklqkis
      301 grlfsdsgpr rstrlagdag vntnanttgv agngtsssky lgaklssval rtvtvrnsqy
      361 wandnieegi raeifddira nlasanssss pgdvrsldqd eptvpvggvv tsrskvssgv
      421 sevlgllktl gegyrlscly rcqdalntfl tlplrhynts wvlsqvgkah felidylead
      481 rvfslslrvs pyslegmdiy stvlyhlked mklsylarel istdrlapqs wcamgncysl
      541 qkdhktavki fqrsvqlntr fayahtlcgh eyvaledfen giksyqdalq idsrhynawy
      601 glgmiflrqe kfefsehhfr taflinprss vilsylgtal halkrsedai kimdcaifsd
      661 rknplpmyqk anilmslekf dealevlqel kgyapressv yalmgkiykr qnmhekamlh
      721 fgialdlkps atdvatikaa ieklhvpdel ed
//
LOCUS       XP_040941590             729 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division cycle protein 27 homolog B isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941590
VERSION     XP_040941590.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085656.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..729
                     /product="cell division cycle protein 27 homolog B isoform
                     X2"
                     /calculated_mol_wt=81008
     Region          15..88
                     /region_name="ANAPC3"
                     /note="Anaphase-promoting complex, cyclosome, subunit 3;
                     pfam12895"
                     /db_xref="CDD:463743"
     Region          27..>161
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          528..>697
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          528..556
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(529,532..533,536..537,539,563,566..567,570..571,
                     573..574,597,600..601,604..605,608)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          561..591
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          596..622
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          630..657
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          664..689
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          698..721
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..729
                     /gene="LOC107893311"
                     /coded_by="XM_041085656.1:106..2295"
                     /db_xref="GeneID:107893311"
ORIGIN      
        1 meailtdcvq nslrhfmfkn aiffcerlca efpsevnlql laasylqnnq aysayhilkg
       61 mqtsqsrylf aiscfqmdll neaettlcps nepggeipng aaghyllgli yrytdrkrsa
      121 ihhfrlalsi dpllwsayee lcilgaaeea tvvfgeaaal ciekqyfyhg laspnlhvas
      181 egcnlvssrn fssedvsrrq lkntqvnslr dipsnhhgaa isasqphngg psnislyntp
      241 spvasqlsgv vppplcrnaq pngsnlntvn adgspksvvn slvqaprrkf vdegklqkis
      301 grlfsdsgpr rstrlagdag vntnanttgv agngtsssky lgaklssval rtvtvrnsqy
      361 wandnieegi raeifddira nlasanssss pgdvrsldqd eptvpvggvv tsrskvssgv
      421 sevlgllktl gegyrlscly rcqdalntfl tlplrhynts wvlsqvgkah felidylead
      481 rvfslslrvs pyslegmdiy stvlyhlked mklsylarel istdrlapqs wcamgncysl
      541 qkdhktavki fqrsvqlntr fayahtlcgh eyvaledfen giksyqdalq idsrhynawy
      601 glgmiflrqe kfefsehhfr taflinprss vilsylgtal halkrsedai kimdcaifsd
      661 rknplpmyqk anilmslekf dealevlqel kgyapressv yalmgkiykr qnmhekamlh
      721 fvlllprkk
//
LOCUS       XP_040941591             703 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division cycle protein 27 homolog B isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941591
VERSION     XP_040941591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085657.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..703
                     /product="cell division cycle protein 27 homolog B isoform
                     X3"
                     /calculated_mol_wt=77978
     Region          15..88
                     /region_name="ANAPC3"
                     /note="Anaphase-promoting complex, cyclosome, subunit 3;
                     pfam12895"
                     /db_xref="CDD:463743"
     Region          27..>161
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          528..>691
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          528..556
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(529,532..533,536..537,539,563,566..567,570..571,
                     573..574,597,600..601,604..605,608)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          561..591
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          596..622
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          630..657
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          664..689
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..703
                     /gene="LOC107893311"
                     /coded_by="XM_041085657.1:105..2216"
                     /db_xref="GeneID:107893311"
ORIGIN      
        1 meailtdcvq nslrhfmfkn aiffcerlca efpsevnlql laasylqnnq aysayhilkg
       61 mqtsqsrylf aiscfqmdll neaettlcps nepggeipng aaghyllgli yrytdrkrsa
      121 ihhfrlalsi dpllwsayee lcilgaaeea tvvfgeaaal ciekqyfyhg laspnlhvas
      181 egcnlvssrn fssedvsrrq lkntqvnslr dipsnhhgaa isasqphngg psnislyntp
      241 spvasqlsgv vppplcrnaq pngsnlntvn adgspksvvn slvqaprrkf vdegklqkis
      301 grlfsdsgpr rstrlagdag vntnanttgv agngtsssky lgaklssval rtvtvrnsqy
      361 wandnieegi raeifddira nlasanssss pgdvrsldqd eptvpvggvv tsrskvssgv
      421 sevlgllktl gegyrlscly rcqdalntfl tlplrhynts wvlsqvgkah felidylead
      481 rvfslslrvs pyslegmdiy stvlyhlked mklsylarel istdrlapqs wcamgncysl
      541 qkdhktavki fqrsvqlntr fayahtlcgh eyvaledfen giksyqdalq idsrhynawy
      601 glgmiflrqe kfefsehhfr taflinprss vilsylgtal halkrsedai kimdcaifsd
      661 rknplpmyqk anilmslekf dealevlqel kglpsrsymy rmn
//
LOCUS       XP_040941592             676 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division cycle protein 27 homolog B isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941592
VERSION     XP_040941592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085658.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..676
                     /product="cell division cycle protein 27 homolog B isoform
                     X4"
                     /calculated_mol_wt=74525
     Region          22..>85
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          24..54
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          442..676
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          452..480
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(453,456..457,460..461,463,487,490..491,494..495,
                     497..498,521,524..525,528..529,532)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          485..515
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          520..546
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          554..581
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          588..613
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          622..650
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..676
                     /gene="LOC107893311"
                     /coded_by="XM_041085658.1:74..2104"
                     /db_xref="GeneID:107893311"
ORIGIN      
        1 mdllneaett lcpsnepgge ipngaaghyl lgliyrytdr krsaihhfrl alsidpllws
       61 ayeelcilga aeeatvvfge aaalciekqy fyhglaspnl hvasegcnlv ssrnfssedv
      121 srrqlkntqv nslrdipsnh hgaaisasqp hnggpsnisl yntpspvasq lsgvvppplc
      181 rnaqpngsnl ntvnadgspk svvnslvqap rrkfvdegkl qkisgrlfsd sgprrstrla
      241 gdagvntnan ttgvagngts sskylgakls svalrtvtvr nsqywandni eegiraeifd
      301 diranlasan sssspgdvrs ldqdeptvpv ggvvtsrskv ssgvsevlgl lktlgegyrl
      361 sclyrcqdal ntfltlplrh yntswvlsqv gkahfelidy leadrvfsls lrvspysleg
      421 mdiystvlyh lkedmklsyl arelistdrl apqswcamgn cyslqkdhkt avkifqrsvq
      481 lntrfayaht lcgheyvale dfengiksyq dalqidsrhy nawyglgmif lrqekfefse
      541 hhfrtaflin prssvilsyl gtalhalkrs edaikimdca ifsdrknplp myqkanilms
      601 lekfdealev lqelkgyapr essvyalmgk iykrqnmhek amlhfgiald lkpsatdvat
      661 ikaaieklhv pdeled
//
LOCUS       XP_040941593             580 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division cycle protein 27 homolog B isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040941593
VERSION     XP_040941593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085659.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..580
                     /product="cell division cycle protein 27 homolog B isoform
                     X5"
                     /calculated_mol_wt=63410
     Region          15..88
                     /region_name="ANAPC3"
                     /note="Anaphase-promoting complex, cyclosome, subunit 3;
                     pfam12895"
                     /db_xref="CDD:463743"
     Region          91..130
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          98..>172
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          460..488
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          461..>565
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          527..557
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..580
                     /gene="LOC107893311"
                     /coded_by="XM_041085659.1:106..1848"
                     /db_xref="GeneID:107893311"
ORIGIN      
        1 meailtdcvq nslrhfmfkn aiffcerlca efpsevnlql laasylqnnq aysayhilkg
       61 mqtsqsrylf aiscfqmdll neaettlcps nepggeipng aaghyllgli yrytdrkrsa
      121 ihhfrlalsi dpllwsayee lcilgaaeea tvvfgeaaal ciekqyfyhg laspnlhvas
      181 egcnlvssrn fssedvsrrq lkntqvnslr dipsnhhgaa isasqphngg psnislyntp
      241 spvasqlsgv vppplcrnaq pngsnlntvn adgspksvvn slvqaprrkf vdegklqkis
      301 grlfsdsgpr rstrlagdag vntnanttgv agngtsssky lgaklssval rtvtvrnsqy
      361 wandnieegi raeifddira nlasanssss pgdvrsldqd eptvpvggvv tsrskvssgv
      421 sevlgllktl gegyrlscly rcqdalntfl tlplrhynts wvlsqvgkah felidylead
      481 rvfslslrvs pyslegmdiy stvlyhlked mklsylarel istdrlapqs wcamgncysl
      541 qkdhktavki fqrsvqlntr fayahtlcgh etfssagmll
//
LOCUS       XP_016673752             338 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate-Fe(II) type oxidoreductase hxnY isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016673752
VERSION     XP_016673752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818263.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..338
                     /product="2-oxoglutarate-Fe(II) type oxidoreductase hxnY
                     isoform X1"
                     /calculated_mol_wt=38035
     Region          1..336
                     /region_name="PLN03002"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:178579"
     CDS             1..338
                     /gene="LOC107893312"
                     /coded_by="XM_016818263.2:295..1311"
                     /db_xref="GeneID:107893312"
ORIGIN      
        1 menqcqngne tllkvstlnc idlsnpdihq svsllkqacl dcgffyvvnh gisqefmdev
       61 fgqsksffel plnekmkvlr nekhrgytpv ldelldpdnq vhvgdykegy yigvevpedd
      121 peaekpfygp nvwpedgllp gwrqtmekfh hqalevakav ariialalgl evdffdkpem
      181 lgkpiatlrl lhyggqvsdp skgiygagah sdyglitlla tdavmglqic kdkdakpqiw
      241 eyvapvkgaf ivnlgdmler wsncifkstl hrvlgngqer ysiayfveps hdclveclpt
      301 cksennppkf ppiycatyls qrykdthael slyekhqt
//
LOCUS       XP_016673753             337 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate-Fe(II) type oxidoreductase hxnY isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016673753
VERSION     XP_016673753.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818264.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..337
                     /product="2-oxoglutarate-Fe(II) type oxidoreductase hxnY
                     isoform X2"
                     /calculated_mol_wt=37936
     Region          1..335
                     /region_name="PLN03002"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:178579"
     CDS             1..337
                     /gene="LOC107893312"
                     /coded_by="XM_016818264.2:295..1308"
                     /db_xref="GeneID:107893312"
ORIGIN      
        1 menqcqngne tllkvstlnc idlsnpdihq svsllkqacl dcgffyvvnh gisqefmdev
       61 fgqsksffel plnekmkvlr nekhrgytpv ldelldpdnq vhgdykegyy igvevpeddp
      121 eaekpfygpn vwpedgllpg wrqtmekfhh qalevakava riialalgle vdffdkpeml
      181 gkpiatlrll hyggqvsdps kgiygagahs dyglitllat davmglqick dkdakpqiwe
      241 yvapvkgafi vnlgdmlerw sncifkstlh rvlgngqery siayfvepsh dclveclptc
      301 ksennppkfp piycatylsq rykdthaels lyekhqt
//
LOCUS       XP_016673751             400 aa            linear   PLN 06-AUG-2024
DEFINITION  protein phosphatase 2C 56 [Gossypium hirsutum].
ACCESSION   XP_016673751
VERSION     XP_016673751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818262.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..400
                     /product="protein phosphatase 2C 56"
                     /calculated_mol_wt=43217
     Region          93..384
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; smart00332"
                     /db_xref="CDD:214625"
     Site            order(107,111..112,152..154,321,377)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..400
                     /gene="LOC107893310"
                     /coded_by="XM_016818262.2:48..1250"
                     /db_xref="GeneID:107893310"
ORIGIN      
        1 meplleeeeq rldrvdslhe pdltstsssl ssvfsavdsr satssgdisg tsgssgeilt
       61 adavvprlle papaceelkv tvtarqkcvg rnnkgvtwgf tsvigrqrem edavavvpaf
      121 msltcghvgg ctapgsrtsp eispihffgv ydghggsqva kfcaermhgv iaeewdrevd
      181 escgwqrrwe valstsfera dsevltaava pemvgstaai vvlsgcqiit sncgdsrvvl
      241 crgtetialt vdqkpdrqde lmriereggr vinwngarvf gvlamsraig drylrpwvip
      301 vpevtftnrt dddeclvias dglwdvmsne eagevarrll rrrrrralmg evddgvspaq
      361 avadnltaia igrnssdnis vivvdlkpkr kspsnavkkr
//
LOCUS       XP_016673750             498 aa            linear   PLN 06-AUG-2024
DEFINITION  hexokinase-1 [Gossypium hirsutum].
ACCESSION   XP_016673750
VERSION     XP_016673750.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818261.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673750.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..498
                     /product="hexokinase-1"
                     /calculated_mol_wt=54020
     Region          26..497
                     /region_name="PLN02914"
                     /note="hexokinase; cl42853"
                     /db_xref="CDD:456198"
     CDS             1..498
                     /gene="LOC107893309"
                     /coded_by="XM_016818261.2:276..1772"
                     /db_xref="GeneID:107893309"
ORIGIN      
        1 mrkvavgaav gcavavcaaa alvvhhrmks sgkwaqaqsi lkdfeekcgt pisklkqvad
       61 amtvemhagl aseggsklkm iisyvdnlpt gdekglfyal dlggtnfrvl rvhlggkehr
      121 vvkqefeevs ipphlmtgss dalfdyiaea lakfvatese glhfspdrqr elgftfsfpv
      181 rqtsissgtl ikwtkgflie davgqdvvge ltkamerigl dmrvtalvnd tigtlaggry
      241 nnpdvvaavi lgtgtnaayv erahaipkwh gllpksgdmv inmewgnfrs shlpiseydq
      301 aldteslnpg eqifeklisg mylgevvrrv lykmadeaaf fgdtipeklk ipfilrtphm
      361 samhqdttpd lkivatklkd ileisntslk mrkvivelcd ivatrgarls aagiagilkk
      421 igrdtlkdge kqksvvsldg glyehytkfr tcmentltel lgeevsenii iehsndgsgi
      481 gaallaashs qyigides
//
LOCUS       XP_016675499             370 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase ATL42 [Gossypium hirsutum].
ACCESSION   XP_016675499
VERSION     XP_016675499.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820010.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675499.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..370
                     /product="E3 ubiquitin-protein ligase ATL42"
                     /calculated_mol_wt=41629
     Region          118..161
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            146..151
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..370
                     /gene="LOC107894798"
                     /coded_by="XM_016820010.2:35..1147"
                     /db_xref="GeneID:107894798"
ORIGIN      
        1 mnrlnltssl fllfvllvgd vestsnshgd assddavsnf qpslaivigi lcamfaltls
       61 liactkfchr gttvdsgdnl ptalrrtksg fsgidkkiie slpffkfssi kgskqglecs
      121 vclskfedte vlrllpqckh afhvecidew lekhsscplc rqkinaddpt iltysnsfrf
      181 lrngsnsnme lkedggssrf etrtadmatd ndddwrvfhk lnvvfknrws nlsssdivll
      241 nsemindmsn dmiknekkmk iiedvkikis sinetntvsg pvvastsssr ivnegerrsm
      301 sditvlsrcr dvitrnrtce ppppsrsssl senftneeti rrqwwsiarr tiqwfsnrei
      361 rsqksriqpi
//
LOCUS       XP_016673747             489 aa            linear   PLN 06-AUG-2024
DEFINITION  probable plastidic glucose transporter 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673747
VERSION     XP_016673747.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818258.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673747.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..489
                     /product="probable plastidic glucose transporter 2 isoform
                     X1"
                     /calculated_mol_wt=52853
     Region          55..472
                     /region_name="MFS_GLUT_like"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     cd17315"
                     /db_xref="CDD:340873"
     Site            order(63,67,183,186..187,190,300..301,305..306,309..310,
                     334,396..397,400..401,405,428..429,432)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340873"
     CDS             1..489
                     /gene="LOC107893308"
                     /coded_by="XM_016818258.2:386..1855"
                     /db_xref="GeneID:107893308"
ORIGIN      
        1 mweregrafs mykrmpsrdr sdvmdveens afsqdsmdve ttnpsmwlsf phvvvgtlss
       61 flfgyhlgvv neplesisld lgfsgntlae glvvstclgg aligslfsgw iadgvgrrra
      121 fqlcalpmii gastsattkt lagmligrfl vgtgmgigps avalyvtevs pasvrgtygs
      181 fiqiatclgl mvalfigipv keiagwwric fwvstipagf lavammfcae sphwlykqgr
      241 iaeaeaefer llggshvkya mvelakldrg ddadtvklse lfygrhfrvv yigstlfalq
      301 qlsginavfy fsssvfksag vpsdvanafi gvanlsgsii amllmdklgr kmlllwsffg
      361 maismlvqva aantfvsgsa slylsvggml mfvltfalga gpvpslllpe ifpsriraka
      421 maicmsvhwv inffvgllfl rlleqlgpql lysmfasvcm mavvfvkknv ietkgkslqe
      481 ievallpqe
//
LOCUS       XP_016673748             489 aa            linear   PLN 06-AUG-2024
DEFINITION  probable plastidic glucose transporter 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016673748
VERSION     XP_016673748.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818259.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673748.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..489
                     /product="probable plastidic glucose transporter 2 isoform
                     X1"
                     /calculated_mol_wt=52853
     Region          55..472
                     /region_name="MFS_GLUT_like"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     cd17315"
                     /db_xref="CDD:340873"
     Site            order(63,67,183,186..187,190,300..301,305..306,309..310,
                     334,396..397,400..401,405,428..429,432)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340873"
     CDS             1..489
                     /gene="LOC107893308"
                     /coded_by="XM_016818259.2:310..1779"
                     /db_xref="GeneID:107893308"
ORIGIN      
        1 mweregrafs mykrmpsrdr sdvmdveens afsqdsmdve ttnpsmwlsf phvvvgtlss
       61 flfgyhlgvv neplesisld lgfsgntlae glvvstclgg aligslfsgw iadgvgrrra
      121 fqlcalpmii gastsattkt lagmligrfl vgtgmgigps avalyvtevs pasvrgtygs
      181 fiqiatclgl mvalfigipv keiagwwric fwvstipagf lavammfcae sphwlykqgr
      241 iaeaeaefer llggshvkya mvelakldrg ddadtvklse lfygrhfrvv yigstlfalq
      301 qlsginavfy fsssvfksag vpsdvanafi gvanlsgsii amllmdklgr kmlllwsffg
      361 maismlvqva aantfvsgsa slylsvggml mfvltfalga gpvpslllpe ifpsriraka
      421 maicmsvhwv inffvgllfl rlleqlgpql lysmfasvcm mavvfvkknv ietkgkslqe
      481 ievallpqe
//
LOCUS       XP_016673749             453 aa            linear   PLN 06-AUG-2024
DEFINITION  probable plastidic glucose transporter 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016673749
VERSION     XP_016673749.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818260.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016673749.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..453
                     /product="probable plastidic glucose transporter 2 isoform
                     X2"
                     /calculated_mol_wt=48540
     Region          19..436
                     /region_name="MFS_GLUT_like"
                     /note="Glucose transporters (GLUTs) and other similar
                     sugar transporters of the Major Facilitator Superfamily;
                     cd17315"
                     /db_xref="CDD:340873"
     Site            order(27,31,147,150..151,154,264..265,269..270,273..274,
                     298,360..361,364..365,369,392..393,396)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340873"
     CDS             1..453
                     /gene="LOC107893308"
                     /coded_by="XM_016818260.2:162..1523"
                     /db_xref="GeneID:107893308"
ORIGIN      
        1 mdvettnpsm wlsfphvvvg tlssflfgyh lgvvneples isldlgfsgn tlaeglvvst
       61 clggaligsl fsgwiadgvg rrrafqlcal pmiigastsa ttktlagmli grflvgtgmg
      121 igpsavalyv tevspasvrg tygsfiqiat clglmvalfi gipvkeiagw wricfwvsti
      181 pagflavamm fcaesphwly kqgriaeaea eferllggsh vkyamvelak ldrgddadtv
      241 klselfygrh frvvyigstl falqqlsgin avfyfsssvf ksagvpsdva nafigvanls
      301 gsiiamllmd klgrkmlllw sffgmaisml vqvaaantfv sgsaslylsv ggmlmfvltf
      361 algagpvpsl llpeifpsri rakamaicms vhwvinffvg llflrlleql gpqllysmfa
      421 svcmmavvfv kknvietkgk slqeievall pqe
//
LOCUS       XP_016673745             262 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CONTINUOUS VASCULAR RING 1 [Gossypium hirsutum].
ACCESSION   XP_016673745
VERSION     XP_016673745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818256.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..262
                     /product="protein CONTINUOUS VASCULAR RING 1"
                     /calculated_mol_wt=29435
     Region          59..244
                     /region_name="COG2928"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:442172"
     CDS             1..262
                     /gene="LOC107893307"
                     /coded_by="XM_016818256.2:249..1037"
                     /db_xref="GeneID:107893307"
ORIGIN      
        1 mgdekstivm asresrdrel lipvsdfvhd dsskpsssss prhaghetfy kfvrswaskk
       61 fmtgcvilfp iaitfyvtww fihfvdgffs piynqlgidi fglgfitslt fifligvfms
      121 swlgasvlal gewfikrmpf vrhiynaskq issaispdqk sqafkevaii rhprigeyaf
      181 gfitssvilq sysgdeelcc vyvptnhlyi gdiflintkd virpnlsvre gieivvsggm
      241 smpqilstvd trlplesrsd rs
//
LOCUS       XP_016673743             480 aa            linear   PLN 06-AUG-2024
DEFINITION  ESX-3 secretion system protein EccA3 [Gossypium hirsutum].
ACCESSION   XP_016673743
VERSION     XP_016673743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818254.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="ESX-3 secretion system protein EccA3"
                     /calculated_mol_wt=54014
     Region          <16..226
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          16..45
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(50,54..55,58..60,62..63,67,70,83,85,87,91..92,
                     95..97,99..100,104,107,116,118,120,124..125,132..134,
                     136..137,141,144,153)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          50..83
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          85..116
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          118..153
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <194..479
                     /region_name="T7SS_EccA"
                     /note="type VII secretion AAA-ATPase EccA; TIGR03922"
                     /db_xref="CDD:188437"
     CDS             1..480
                     /gene="LOC107893305"
                     /coded_by="XM_016818254.2:264..1706"
                     /db_xref="GeneID:107893305"
ORIGIN      
        1 mkrrhqdqls rpskpttihg faqygdldal rkllndnpsl lnernpvmaq tplhvsagyd
       61 rvdivkflld wqgpekieme aknmygetpl hmaakngcne aarlllvhga fieakanngm
      121 tplhlavwht irsddyatvk tlleynadcs aednegmtpi khlskgpgse klselfhwhl
      181 eeqrkrrale acgetkakms elenellniv gldelkvqlr kwakgmllde rrralglkvg
      241 arrpphmafl gnpgtgktmv arilgkllhm vgilptdkvt evqrtdlvge fvghtgpktr
      301 rkvqeaeggi lfvdeayrli pmqkaddkdy glealeeims vmdsgkivvi fsgysepmkr
      361 viasnegfcr rvtkffhfsd fnseelakil hikknhqtee sllygfklhs scsvdaiarl
      421 iekettekqr kemngglvdp mlvnarenld lrldfnctna delrtitled leagiqlltp
//
LOCUS       XP_016673744             379 aa            linear   PLN 06-AUG-2024
DEFINITION  3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016673744
VERSION     XP_016673744.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818255.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..379
                     /product="3-hydroxyisobutyryl-CoA hydrolase-like protein
                     3, mitochondrial"
                     /calculated_mol_wt=41238
     Region          17..367
                     /region_name="ECH_2"
                     /note="Enoyl-CoA hydratase/isomerase; pfam16113"
                     /db_xref="CDD:465024"
     CDS             1..379
                     /gene="LOC107893306"
                     /coded_by="XM_016818255.2:358..1497"
                     /db_xref="GeneID:107893306"
ORIGIN      
        1 magaedfvkg nvypngvaii tldrpkalna mnldmdvkyk qileewesdp kvkcvlvegs
       61 ssrafcagmd ikgvvaeiqk drntplvpkv ftaeyslick iseykkpyis fmdgitmgfg
      121 iglsghgryr vitertvlam pengiglfpd vgfsyiaaqt pgggsvgayl gmtgkristp
      181 sdalfiglgt hyvpsgnlas vkeallastf sedphkdvtt llgkyssdpe seaqlksllp
      241 qitscfnank svkeiieelk khqqsteasv vewanealqg lgkgapfslf lthnyfsrva
      301 sgygkqnnef tmlkgvmkte yrvalrsslr ndfaegvrav lidkdknpkw npatldevdq
      361 keveavfepl gpgieelkv
//
LOCUS       XP_016727548             413 aa            linear   PLN 06-AUG-2024
DEFINITION  palmitoyl-acyl carrier protein thioesterase, chloroplastic-like
            [Gossypium hirsutum].
ACCESSION   XP_016727548
VERSION     XP_016727548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872059.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..413
                     /product="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like"
                     /calculated_mol_wt=45875
     Region          1..413
                     /region_name="PLN02370"
                     /note="acyl-ACP thioesterase"
                     /db_xref="CDD:215210"
     CDS             1..413
                     /gene="LOC107938815"
                     /coded_by="XM_016872059.2:532..1773"
                     /db_xref="GeneID:107938815"
ORIGIN      
        1 mvataatssf fpvtpspdss dskkkrlgng sinlggiksk tsssgnlqvk anaqappkin
       61 gtkvvtppae vfknedgvsf hpprtfinql pdwsmllaai ttvflaaekq wmmldwkpkr
      121 pdmlidpfgi gkivqdglvf rqnfsirsye igadqtasie tvmnhlqeta lnhvrsagll
      181 vdgfgstpem ckknliwvvt rmqvvvdryp twgnvvqvdt wvsasgkncm rrdwlvrdsk
      241 tgevltrass iwvmmnkvtr rlskmpeevr geiepyfmns epvvaedsrk lvklndssae
      301 fvrkgltpkw sdldvnqhvn nvkyigwile saplpileth elssmtleyr recgrdsvlq
      361 sltavsdngt deiecqhllr ledgsevtrg rtqwrpknak isgnvgqipa dta
//
LOCUS       XP_016727549             413 aa            linear   PLN 06-AUG-2024
DEFINITION  palmitoyl-acyl carrier protein thioesterase, chloroplastic-like
            [Gossypium hirsutum].
ACCESSION   XP_016727549
VERSION     XP_016727549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..413
                     /product="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like"
                     /calculated_mol_wt=45875
     Region          1..413
                     /region_name="PLN02370"
                     /note="acyl-ACP thioesterase"
                     /db_xref="CDD:215210"
     CDS             1..413
                     /gene="LOC107938815"
                     /coded_by="XM_016872060.2:343..1584"
                     /db_xref="GeneID:107938815"
ORIGIN      
        1 mvataatssf fpvtpspdss dskkkrlgng sinlggiksk tsssgnlqvk anaqappkin
       61 gtkvvtppae vfknedgvsf hpprtfinql pdwsmllaai ttvflaaekq wmmldwkpkr
      121 pdmlidpfgi gkivqdglvf rqnfsirsye igadqtasie tvmnhlqeta lnhvrsagll
      181 vdgfgstpem ckknliwvvt rmqvvvdryp twgnvvqvdt wvsasgkncm rrdwlvrdsk
      241 tgevltrass iwvmmnkvtr rlskmpeevr geiepyfmns epvvaedsrk lvklndssae
      301 fvrkgltpkw sdldvnqhvn nvkyigwile saplpileth elssmtleyr recgrdsvlq
      361 sltavsdngt deiecqhllr ledgsevtrg rtqwrpknak isgnvgqipa dta
//
LOCUS       XP_016727533             506 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' kappa isoform [Gossypium hirsutum].
ACCESSION   XP_016727533
VERSION     XP_016727533.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727533.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' kappa isoform"
                     /calculated_mol_wt=57354
     Region          30..>94
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          82..484
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..506
                     /gene="LOC107938806"
                     /coded_by="XM_016872044.2:1078..2598"
                     /db_xref="GeneID:107938806"
ORIGIN      
        1 mikqilrklp rksqksdsld sagndsdnha snsddgvqct nfgnkissrl rvvkrvssav
       61 fpasimagve avepnlsfnn vsnpqkpnlf isklnlccea cnssdpdkgt aeqdlkrrtl
      121 ielvdfvssg sakfneaaia amckmcainl frvfppkyrs ntasgeadde epvfdpawsn
      181 lqlvydlflq figyssldak vakkyidqpf ilrlldlfes edprerdclk tilhriygkf
      241 tvhrpfvrka vsniiytfvf eterhngiae lleifgsiis gfavplkeeh kmflcrvlip
      301 lhkpksvgvy hqqltycvvq fidkdpklan svitgllkyw pvtnsqkelm fiseseeile
      361 mismtefqki mvplfrriac clnsfhyqva erahmlcnne hvlnlikhnr qiifplifpa
      421 lernsrnhwh qtvlnltknt rkmlseidde ltlacerkle eensqsneas ekrkltwerl
      481 elaagfepaa anlvpplkpa tcsvac
//
LOCUS       XP_016727534             506 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' kappa isoform [Gossypium hirsutum].
ACCESSION   XP_016727534
VERSION     XP_016727534.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727534.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' kappa isoform"
                     /calculated_mol_wt=57354
     Region          30..>94
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          82..484
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..506
                     /gene="LOC107938806"
                     /coded_by="XM_016872045.2:332..1852"
                     /db_xref="GeneID:107938806"
ORIGIN      
        1 mikqilrklp rksqksdsld sagndsdnha snsddgvqct nfgnkissrl rvvkrvssav
       61 fpasimagve avepnlsfnn vsnpqkpnlf isklnlccea cnssdpdkgt aeqdlkrrtl
      121 ielvdfvssg sakfneaaia amckmcainl frvfppkyrs ntasgeadde epvfdpawsn
      181 lqlvydlflq figyssldak vakkyidqpf ilrlldlfes edprerdclk tilhriygkf
      241 tvhrpfvrka vsniiytfvf eterhngiae lleifgsiis gfavplkeeh kmflcrvlip
      301 lhkpksvgvy hqqltycvvq fidkdpklan svitgllkyw pvtnsqkelm fiseseeile
      361 mismtefqki mvplfrriac clnsfhyqva erahmlcnne hvlnlikhnr qiifplifpa
      421 lernsrnhwh qtvlnltknt rkmlseidde ltlacerkle eensqsneas ekrkltwerl
      481 elaagfepaa anlvpplkpa tcsvac
//
LOCUS       XP_016727535             506 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' kappa isoform [Gossypium hirsutum].
ACCESSION   XP_016727535
VERSION     XP_016727535.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727535.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' kappa isoform"
                     /calculated_mol_wt=57354
     Region          30..>94
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          82..484
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..506
                     /gene="LOC107938806"
                     /coded_by="XM_016872046.2:431..1951"
                     /db_xref="GeneID:107938806"
ORIGIN      
        1 mikqilrklp rksqksdsld sagndsdnha snsddgvqct nfgnkissrl rvvkrvssav
       61 fpasimagve avepnlsfnn vsnpqkpnlf isklnlccea cnssdpdkgt aeqdlkrrtl
      121 ielvdfvssg sakfneaaia amckmcainl frvfppkyrs ntasgeadde epvfdpawsn
      181 lqlvydlflq figyssldak vakkyidqpf ilrlldlfes edprerdclk tilhriygkf
      241 tvhrpfvrka vsniiytfvf eterhngiae lleifgsiis gfavplkeeh kmflcrvlip
      301 lhkpksvgvy hqqltycvvq fidkdpklan svitgllkyw pvtnsqkelm fiseseeile
      361 mismtefqki mvplfrriac clnsfhyqva erahmlcnne hvlnlikhnr qiifplifpa
      421 lernsrnhwh qtvlnltknt rkmlseidde ltlacerkle eensqsneas ekrkltwerl
      481 elaagfepaa anlvpplkpa tcsvac
//
LOCUS       XP_016727532             506 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' kappa isoform [Gossypium hirsutum].
ACCESSION   XP_016727532
VERSION     XP_016727532.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727532.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' kappa isoform"
                     /calculated_mol_wt=57354
     Region          30..>94
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          82..484
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..506
                     /gene="LOC107938806"
                     /coded_by="XM_016872043.2:324..1844"
                     /db_xref="GeneID:107938806"
ORIGIN      
        1 mikqilrklp rksqksdsld sagndsdnha snsddgvqct nfgnkissrl rvvkrvssav
       61 fpasimagve avepnlsfnn vsnpqkpnlf isklnlccea cnssdpdkgt aeqdlkrrtl
      121 ielvdfvssg sakfneaaia amckmcainl frvfppkyrs ntasgeadde epvfdpawsn
      181 lqlvydlflq figyssldak vakkyidqpf ilrlldlfes edprerdclk tilhriygkf
      241 tvhrpfvrka vsniiytfvf eterhngiae lleifgsiis gfavplkeeh kmflcrvlip
      301 lhkpksvgvy hqqltycvvq fidkdpklan svitgllkyw pvtnsqkelm fiseseeile
      361 mismtefqki mvplfrriac clnsfhyqva erahmlcnne hvlnlikhnr qiifplifpa
      421 lernsrnhwh qtvlnltknt rkmlseidde ltlacerkle eensqsneas ekrkltwerl
      481 elaagfepaa anlvpplkpa tcsvac
//
LOCUS       XP_016727536             435 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/pyruvate cotransporter BASS2, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016727536
VERSION     XP_016727536.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727536.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..435
                     /product="sodium/pyruvate cotransporter BASS2,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=46739
     Region          111..424
                     /region_name="YfeH"
                     /note="Predicted Na+-dependent transporter YfeH [General
                     function prediction only]; COG0385"
                     /db_xref="CDD:440154"
     CDS             1..435
                     /gene="LOC107938807"
                     /coded_by="XM_016872047.2:274..1581"
                     /db_xref="GeneID:107938807"
ORIGIN      
        1 maalsrfvvk dtnlhayeav irrrpwslip grrilsaqld vragislygn gwsmqskpns
       61 plaallapss iilasrnskv kckaaanvsg dsptpkgmnq yeriietltt lfpvwvtlga
      121 ivgiykpaav twletdlftl glgflmlsmg ltltfedfrr clrnpwtlgv gflaqylikp
      181 mlgfaiattl klsaplatgl ilvsccpggq asnvatyisk gnvalsvlmt tcstvgaivm
      241 tplltkllag qlvpvkavdl alstfqvvlv ptvigvlane yfpkftskii svtpligvvl
      301 ttllcaspig lvsevlktqg aqlifpvall haaafaigyw vskisfgest srtisiecvm
      361 qriilhihvq irvkhkcrtq ssalgfllak khftnplvmv psavsvvfma lggsglavfw
      421 rnrpiplddk ddfke
//
LOCUS       XP_016727537             416 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/pyruvate cotransporter BASS2, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016727537
VERSION     XP_016727537.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727537.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..416
                     /product="sodium/pyruvate cotransporter BASS2,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=44378
     Region          111..405
                     /region_name="YfeH"
                     /note="Predicted Na+-dependent transporter YfeH [General
                     function prediction only]; COG0385"
                     /db_xref="CDD:440154"
     CDS             1..416
                     /gene="LOC107938807"
                     /coded_by="XM_016872048.2:265..1515"
                     /db_xref="GeneID:107938807"
ORIGIN      
        1 maalsrfvvk dtnlhayeav irrrpwslip grrilsaqld vragislygn gwsmqskpns
       61 plaallapss iilasrnskv kckaaanvsg dsptpkgmnq yeriietltt lfpvwvtlga
      121 ivgiykpaav twletdlftl glgflmlsmg ltltfedfrr clrnpwtlgv gflaqylikp
      181 mlgfaiattl klsaplatgl ilvsccpggq asnvatyisk gnvalsvlmt tcstvgaivm
      241 tplltkllag qlvpvkavdl alstfqvvlv ptvigvlane yfpkftskii svtpligvvl
      301 ttllcaspig lvsevlktqg aqlifpvall haaafaigyw vskisfgest srtisiecvm
      361 qssalgflla kkhftnplvm vpsavsvvfm alggsglavf wrnrpipldd kddfke
//
LOCUS       XP_016727538             382 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/pyruvate cotransporter BASS2, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016727538
VERSION     XP_016727538.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872049.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727538.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..382
                     /product="sodium/pyruvate cotransporter BASS2,
                     chloroplastic isoform X3"
                     /calculated_mol_wt=40774
     Region          58..371
                     /region_name="YfeH"
                     /note="Predicted Na+-dependent transporter YfeH [General
                     function prediction only]; COG0385"
                     /db_xref="CDD:440154"
     CDS             1..382
                     /gene="LOC107938807"
                     /coded_by="XM_016872049.2:302..1450"
                     /db_xref="GeneID:107938807"
ORIGIN      
        1 mqskpnspla allapssiil asrnskvkck aaanvsgdsp tpkgmnqyer iietlttlfp
       61 vwvtlgaivg iykpaavtwl etdlftlglg flmlsmgltl tfedfrrclr npwtlgvgfl
      121 aqylikpmlg faiattlkls aplatglilv sccpggqasn vatyiskgnv alsvlmttcs
      181 tvgaivmtpl ltkllagqlv pvkavdlals tfqvvlvptv igvlaneyfp kftskiisvt
      241 pligvvlttl lcaspiglvs evlktqgaql ifpvallhaa afaigywvsk isfgestsrt
      301 isiecvmqri ilhihvqirv khkcrtqssa lgfllakkhf tnplvmvpsa vsvvfmalgg
      361 sglavfwrnr piplddkddf ke
//
LOCUS       XP_016727515             628 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At2g26730 [Gossypium hirsutum].
ACCESSION   XP_016727515
VERSION     XP_016727515.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872026.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727515.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..628
                     /product="probable inactive receptor kinase At2g26730"
                     /calculated_mol_wt=68597
     Region          27..62
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <89..609
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          352..614
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(352..356,360,372,374,402,418..421,425,427,470,472,
                     474..475,477,488,491,503..506)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(352..356,360,372,374,402,418..421,425,470,472,
                     474..475,477,488)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(356,425,427,470,472,474,491,503..506)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(487..494,499..506)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..628
                     /gene="LOC107938787"
                     /coded_by="XM_016872026.2:202..2088"
                     /db_xref="GeneID:107938787"
ORIGIN      
        1 mpvvdfvcvf lvsvvmfnlr vstepvedkq allafisgir hadrvkwnss tsacdwfgvq
       61 cdanrsfvyt lrlpgaalig sippntigrl nrlrvlslra nrlsgeipad fynltqlrsl
      121 ylqgneftgp fppsvtrltr ltrldlssnn ftgpiplgvn nltqltglfl qnnkfsgslp
      181 sidsdglndf nvsnnnlkgs ipdslskfpe ssfagniglc ggplrpcnpf ppspsptepi
      241 ppktsgqssk slptgaiiai avgsaivall lllfliicfr kwkrksprrq kaipstthav
      301 pveeagtsss kdditggste iermmnnklm ffkggvysfd ledlmrasae mlgkgstgts
      361 yrvvlavgtt vavkrlkdva vskrefvmkm gmlgkimhen vvplrafyys deekllvydy
      421 mhggslfall hgsrssartp lewdprmkia lgvarglahl hssqnmvhgn ikssnillrp
      481 dheacisefg lnslfntntp psriagyqap eviqthkvtv ksdvysfgvl llelltgrap
      541 iqpsiteeaf dlprwvqsvv reewaaevfd aelmayhdie eemvqalqia mvcvstvpdq
      601 rpvmsevvrm igdmidrggt ndgtaaai
//
LOCUS       XP_016727528             467 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA3 [Gossypium hirsutum].
ACCESSION   XP_016727528
VERSION     XP_016727528.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872039.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727528.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..467
                     /product="putative disease resistance protein RGA3"
                     /calculated_mol_wt=53859
     Region          13..96
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,108,111,114..116,118..120,122..123)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          169..414
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..467
                     /gene="LOC107938803"
                     /coded_by="XM_016872039.2:116..1519"
                     /db_xref="GeneID:107938803"
ORIGIN      
        1 maetflfsia erlvdkivgl tvdevrlafn vktdlkkled tmisikavll daerqqhqnd
       61 klrlcmwklr difydaedvi ddfkcealrk qdainhpnin nlkvrvlgsf clplsfslkm
      121 shkikdingr lgelatewns fdlrqcsdnr hvfrretisf vdssdvigrd kdkeniisml
      181 mkpsedrnvp vipivgiggl gkttlaqlvy nddrvtslfp lkiwicvsee fdlsrllnli
      241 iqsvnkevrc ddltlealqa clrsllnekk fllvlddvwn enqakwvelr nllrsidglr
      301 qskiivttrg lkvaslmssi cpyelkglpf edcltlftkw afndgderhy pnlirigeei
      361 vkkckgvpla vrtlgsllfq ktdesdwiyi reseiwrleq hendilpvlk lsynhlpshl
      421 qrclaflsly kkdeiylsdk ssvfgwqmdf lnmqskiksg rmlanni
//
LOCUS       XP_016727529             467 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA3 [Gossypium hirsutum].
ACCESSION   XP_016727529
VERSION     XP_016727529.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872040.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727529.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..467
                     /product="putative disease resistance protein RGA3"
                     /calculated_mol_wt=53859
     Region          13..96
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,108,111,114..116,118..120,122..123)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          169..414
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..467
                     /gene="LOC107938803"
                     /coded_by="XM_016872040.2:116..1519"
                     /db_xref="GeneID:107938803"
ORIGIN      
        1 maetflfsia erlvdkivgl tvdevrlafn vktdlkkled tmisikavll daerqqhqnd
       61 klrlcmwklr difydaedvi ddfkcealrk qdainhpnin nlkvrvlgsf clplsfslkm
      121 shkikdingr lgelatewns fdlrqcsdnr hvfrretisf vdssdvigrd kdkeniisml
      181 mkpsedrnvp vipivgiggl gkttlaqlvy nddrvtslfp lkiwicvsee fdlsrllnli
      241 iqsvnkevrc ddltlealqa clrsllnekk fllvlddvwn enqakwvelr nllrsidglr
      301 qskiivttrg lkvaslmssi cpyelkglpf edcltlftkw afndgderhy pnlirigeei
      361 vkkckgvpla vrtlgsllfq ktdesdwiyi reseiwrleq hendilpvlk lsynhlpshl
      421 qrclaflsly kkdeiylsdk ssvfgwqmdf lnmqskiksg rmlanni
//
LOCUS       XP_016727527             862 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA4 [Gossypium hirsutum].
ACCESSION   XP_016727527
VERSION     XP_016727527.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727527.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..862
                     /product="putative disease resistance protein RGA4"
                     /calculated_mol_wt=99487
     Region          13..96
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,96,99,102..104,106,119..120,122..123)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          169..414
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          469..822
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          572..594
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          595..618
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          619..664
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          665..688
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          768..791
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..862
                     /gene="LOC107938801"
                     /coded_by="XM_016872038.2:100..2688"
                     /db_xref="GeneID:107938801"
ORIGIN      
        1 maetflfdia ervlakighl svdevrlafn vktdlkkled imisikavll daerqqhqne
       61 klrlcmwklr difydaedvi ddfkcealrk qdainhpnin nlkvrvlgsf rlplsfslki
      121 ahkikdingr lgelatewns fglrqcndsr hvfcretisf vdssdvigrd edkeniisml
      181 mkpsedrnvp vipvvgiggl gkttlaqfvy nddrvtslfp lkiwicvsee fdlsrllkli
      241 iqsvnkgerc ddstldalqa rlrsllndkk flivlddvwn enqakwvelr nflrstngfs
      301 pskiivttrs lkvasimssi ppyileglpl edcltlftkw afndgderhy pnlirigeei
      361 vkkckgvpla vrtlgsllfq ktdesdwiyi reseiwrieq hendilpvlk lsynhlpshl
      421 qrcfaflsly kkdeiyysdr virlwmangl lehpkqnqew edvgkrylne llsrcliqme
      481 ydfglyfnfk mhdlvhdlal dvsqkecktv nsktetvden vrhlllceqk lvevprvlee
      541 mknvrtliiq dvskasines linlcvsnfk ylralalrrs plralpncig tlkhlrdldl
      601 ahcggiqklp ssfdklrslq slnlegsglk llpdsvqrli elrhlemtve akhlkeirag
      661 cwtslqylrl gwckeleclp egmqylkslr tlvlvfchkl vslprslkfl tklehleiky
      721 cqkinlemev eeeedkdlql slktfsllel nalrdlprll lqgssstlqq lqicwcpnls
      781 vlparllnlt slhkleivgc iklsaqlegi erltnltelt ihgcpelskr yrenagkdwh
      841 kiahiqkvvi kdeicnkiif sl
//
LOCUS       XP_040941594             605 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941594
VERSION     XP_040941594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085660.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..605
                     /product="putative disease resistance protein RGA4 isoform
                     X1"
                     /calculated_mol_wt=69708
     Region          <7..165
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <316..573
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          418..441
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          442..465
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          466..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..519
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          521..544
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          545..568
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..605
                     /gene="LOC107938805"
                     /coded_by="XM_041085660.1:866..2683"
                     /db_xref="GeneID:107938805"
ORIGIN      
        1 miltlevlqa rlrsllndkk fllvlddvwn enqakwvglr nllrstdgfs pskiivttrs
       61 lnvasimssi ppyilkglpl edcltlftkw afndgdqthy snlirigeei vkkckgvpla
      121 vrtlgsllfq ktdesdwiyi rdqteiwrle qhendilpvl klsynhlpsh lqrclaflsl
      181 yrkdemyysd kvirlwmang llehpkqnqe wedvgkrhln ellsrcliqk erdfglyftf
      241 kmhdlvhdla ldvsqkecki vnsetetvde nvrhlllcdd klvkvphvle emknvrtiii
      301 hdvlvesktf hesvinlcvs nfkylralel wgspstalpn sigtlkhlrd ldlggcrsir
      361 elprsfdklr slqslnlgyt glqqlpdcvq rlielrhlvi tikathlkei ragcwtslqy
      421 lvlyeckele clpegmqylk slrtlvlcfc tklvslprsl kfltklehla igccvqinlk
      481 meaeeeedkd lqlslktlsl dnlyaltdlp rlllqgssst lqqlrvmrcp klsilpawll
      541 nltslhklei edcgnlsalp egidrltnlr eltidgcpel skryrengge dwhkiahiqk
      601 vdikd
//
LOCUS       XP_040941595             605 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941595
VERSION     XP_040941595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085661.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..605
                     /product="putative disease resistance protein RGA4 isoform
                     X1"
                     /calculated_mol_wt=69708
     Region          <7..165
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <316..573
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          418..441
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          442..465
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          466..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..519
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          521..544
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          545..568
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..605
                     /gene="LOC107938805"
                     /coded_by="XM_041085661.1:711..2528"
                     /db_xref="GeneID:107938805"
ORIGIN      
        1 miltlevlqa rlrsllndkk fllvlddvwn enqakwvglr nllrstdgfs pskiivttrs
       61 lnvasimssi ppyilkglpl edcltlftkw afndgdqthy snlirigeei vkkckgvpla
      121 vrtlgsllfq ktdesdwiyi rdqteiwrle qhendilpvl klsynhlpsh lqrclaflsl
      181 yrkdemyysd kvirlwmang llehpkqnqe wedvgkrhln ellsrcliqk erdfglyftf
      241 kmhdlvhdla ldvsqkecki vnsetetvde nvrhlllcdd klvkvphvle emknvrtiii
      301 hdvlvesktf hesvinlcvs nfkylralel wgspstalpn sigtlkhlrd ldlggcrsir
      361 elprsfdklr slqslnlgyt glqqlpdcvq rlielrhlvi tikathlkei ragcwtslqy
      421 lvlyeckele clpegmqylk slrtlvlcfc tklvslprsl kfltklehla igccvqinlk
      481 meaeeeedkd lqlslktlsl dnlyaltdlp rlllqgssst lqqlrvmrcp klsilpawll
      541 nltslhklei edcgnlsalp egidrltnlr eltidgcpel skryrengge dwhkiahiqk
      601 vdikd
//
LOCUS       XP_040941596             509 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941596
VERSION     XP_040941596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085662.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..509
                     /product="putative disease resistance protein RGA3 isoform
                     X2"
                     /calculated_mol_wt=58978
     Region          <7..165
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <316..>472
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          325..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          372..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          418..441
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..509
                     /gene="LOC107938805"
                     /coded_by="XM_041085662.1:869..2398"
                     /db_xref="GeneID:107938805"
ORIGIN      
        1 miltlevlqa rlrsllndkk fllvlddvwn enqakwvglr nllrstdgfs pskiivttrs
       61 lnvasimssi ppyilkglpl edcltlftkw afndgdqthy snlirigeei vkkckgvpla
      121 vrtlgsllfq ktdesdwiyi rdqteiwrle qhendilpvl klsynhlpsh lqrclaflsl
      181 yrkdemyysd kvirlwmang llehpkqnqe wedvgkrhln ellsrcliqk erdfglyftf
      241 kmhdlvhdla ldvsqkecki vnsetetvde nvrhlllcdd klvkvphvle emknvrtiii
      301 hdvlvesktf hesvinlcvs nfkylralel wgspstalpn sigtlkhlrd ldlggcrsir
      361 elprsfdklr slqslnlgyt glqqlpdcvq rlielrhlvi tikathlkei ragcwtslqy
      421 lvlyeckele clpegmqylk slrtlvlcfc tklvslprsl kfltklehla igccvqinlk
      481 meaeeeedkd lhnyelcvvq scpfyqhgy
//
LOCUS       XP_040941597             186 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g66910 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941597
VERSION     XP_040941597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085663.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..186
                     /product="probable disease resistance protein At5g66910
                     isoform X3"
                     /calculated_mol_wt=21504
     Region          13..96
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,108,111,123..125,127..129,131..132)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          <97..>159
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..186
                     /gene="LOC107938805"
                     /coded_by="XM_041085663.1:114..674"
                     /db_xref="GeneID:107938805"
ORIGIN      
        1 maetflfnia ervvekivsl tvdevrlafn vktdlkkled tmisikavll daerqqhqne
       61 klrlcmwklr difydaedvi ddfkcealrk qdainhpnin nlkqlrvmrc pklsilpawl
      121 lnltslhkle iedcgnlsal pegidrltnl reltidgcpe lskryrengg edwhkiahiq
      181 kvdikd
//
LOCUS       XP_016727530             383 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RGA2-like [Gossypium hirsutum].
ACCESSION   XP_016727530
VERSION     XP_016727530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872041.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="disease resistance protein RGA2-like"
                     /calculated_mol_wt=43622
     Region          13..96
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,108,111,114..116,118..120,122..123)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          169..>363
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..383
                     /gene="LOC107938804"
                     /coded_by="XM_016872041.2:1..1152"
                     /db_xref="GeneID:107938804"
ORIGIN      
        1 maetflfnia ervleklvhl svqeirlafn vktdlkkleg tmisikavll daerqqhqne
       61 klrlcmwklr gifydaedvi ddfkcealck qdatnhpdin nlkvrvlgsc clplsfslkm
      121 shkikdingr lgklstewks felrqcsdnr hvfrretisf vdssdvigrd kdkeniisml
      181 mkpsedrnvp vipivgiggl gkttlaqlvy nddritslfp lkiwicvsee fdlsrllkli
      241 iqsvnkeerc ddstldglqa rlrsllndkk fllvlddvwn enqakwvelr nllrstdgfs
      301 lskiivttrs ldvasimspn rpyilkglpl edcltlftkw afndgaekhy pnlirigeei
      361 vkkmqrgslg sknigkptvs eng
//
LOCUS       XP_016727518             744 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA4 [Gossypium hirsutum].
ACCESSION   XP_016727518
VERSION     XP_016727518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..744
                     /product="putative disease resistance protein RGA4"
                     /calculated_mol_wt=85965
     Region          69..310
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <474..>685
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          483..505
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          530..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          577..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          601..624
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          625..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..702
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          703..726
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..744
                     /gene="LOC107938791"
                     /coded_by="XM_016872029.2:1..2235"
                     /db_xref="GeneID:107938791"
ORIGIN      
        1 mvrflasccp clplsfslrm ahkikdinrr lgelatewns fdlrqcsdnr hvfrretlss
       61 vdssdvigrd edkekiinml rkpskdrnvp vipiaglrgl gkttlaqlvy nddrvitlfp
      121 lkiwicvsee fdlsrllkli iqsvkcddlp lnalqdrlrs llndkkfllv lddvwnenqa
      181 kwvqlrnllr skdglsqnki ivttrslkva simssippyg pkglslencl tlftkwafnd
      241 geerhypnli rigkeivkks kgiplavitl gsllfkktne sdwisikese iwrleqkend
      301 ilpelklsyn hlpsslqrcl affslykkda iynsnevirl wmangllehp krkqewedvg
      361 eqyleellsr cliqkvtssp lyfalklhvr drglyftfkm hdlvhdlasd vfqkeceivn
      421 sqtkmvdekv rhlsfydekl levpwvsknl kkvrtviihd vskesktihk slinpcvsnf
      481 kylralklry lplttlpnsi galkhlkdld lsqcqglqel prsfyklrsl qslnleedtd
      541 lkqlpdsvqr lieithleit ikakhlkeir agcwtslqyl klhscsklec lpegmqylks
      601 lrtlvlfdca klvpsprslk flsklenlki nscrrinlem epeeekddlq lslktfslfq
      661 lralrdlprl llqgssstlq qiqitwcrql svlpawllnl tslqelrvdt crnlsalpeg
      721 igrltnlrql tmvgcpveqk iqtk
//
LOCUS       XP_016727519             345 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-fucose transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016727519
VERSION     XP_016727519.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727519.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="GDP-fucose transporter 1"
                     /calculated_mol_wt=37793
     Region          19..303
                     /region_name="VRG4"
                     /note="Nucleotide-sugar transporter [Carbohydrate
                     transport and metabolism / Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; COG5070"
                     /db_xref="CDD:227402"
     CDS             1..345
                     /gene="LOC107938792"
                     /coded_by="XM_016872030.2:386..1423"
                     /db_xref="GeneID:107938792"
ORIGIN      
        1 msairfeptk qyyattglvv gyalcsslla vinkfaitkf nypglltalq yvtsalgvwv
       61 lgkfgflhhd pfkldiankf lpaavvfyla iftntnllrh anvdtfivfr sltpllvala
      121 dtifrrqpcp skltfmslli ilggavgyva tdsaftltay swafaylvti ttemvyikhm
      181 vmnlglntwg lvlynnlfsl mmapifwvlt geynevfaal vanggnwfep vafpavslsc
      241 lfgflisffg faarkavsat aftvtgvvnk fltvminvli wdkhatpfgl vcllftlsgg
      301 vlyqqsvtgp pphdstaskq tsdssdnddh ednqdkrmpg khast
//
LOCUS       XP_016727516             134 aa            linear   PLN 06-AUG-2024
DEFINITION  probable histone H2A variant 3 [Gossypium hirsutum].
ACCESSION   XP_016727516
VERSION     XP_016727516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="probable histone H2A variant 3"
                     /calculated_mol_wt=14213
     Region          1..134
                     /region_name="PLN00154"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:177756"
     CDS             1..134
                     /gene="LOC107938788"
                     /coded_by="XM_016872027.2:280..684"
                     /db_xref="GeneID:107938788"
ORIGIN      
        1 msgkgakgli mgknsasnkd kdkkkpisrs sraglqfpvg rihrllklrt tahgrvgata
       61 avysaailey ltaevlelag naskdlkvkr itprhlqlai rgdeeldtli kgtiagggvi
      121 phihkslink sske
//
LOCUS       XP_016727547             417 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome regulatory subunit 8 homolog A [Gossypium hirsutum].
ACCESSION   XP_016727547
VERSION     XP_016727547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872058.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..417
                     /product="26S proteasome regulatory subunit 8 homolog A"
                     /calculated_mol_wt=46980
     Region          34..411
                     /region_name="PRK03992"
                     /note="proteasome-activating nucleotidase; Provisional"
                     /db_xref="CDD:179699"
     CDS             1..417
                     /gene="LOC107938814"
                     /coded_by="XM_016872058.2:173..1426"
                     /db_xref="GeneID:107938814"
ORIGIN      
        1 matvsverkq pataeemcta ksgakqgegl rqyylqhihe lqlnlrqkth nlnrleaqrn
       61 elnsrvrmlr eelqllqepg syvgevvkvm gknkvlvkvh pegkyvvdid ksiditkitp
      121 strvalrnds yvlhlilpsk vdplvnlmkv ekvpdstydm iggldqqike ikevielpik
      181 hpelfeslgi aqpkgvllyg ppgtgktlla ravahhtdct firvsgselv qkyigegsrm
      241 vrelfvmare hapsiifmde idsigsarme sgsgngdsev qrtmlellnq ldgfeasnki
      301 kvlmatnrid ildqallrpg ridrkiefpn pneesrqdil kihsrrmnlm rgidlkkiae
      361 kmngasgael kavcteagmf alrerrvhvt qedfemavak vmkketeknm slrklwk
//
LOCUS       XP_016727539             875 aa            linear   PLN 06-AUG-2024
DEFINITION  potassium channel AKT1 [Gossypium hirsutum].
ACCESSION   XP_016727539
VERSION     XP_016727539.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727539.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..875
                     /product="potassium channel AKT1"
                     /calculated_mol_wt=98758
     Region          23..859
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          523..549
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(551,553,557..558,561..563,565..566,570,573,582,584,
                     586,590..591,594..596,598..599,603,606,615,648,650,
                     654..655,658..660,662..663,667,670,679)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          551..582
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          584..615
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          648..679
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..875
                     /gene="LOC107938808"
                     /coded_by="XM_016872050.2:175..2802"
                     /db_xref="GeneID:107938808"
ORIGIN      
        1 mfrvsvcgqe dieqisress hyslstgilp slgarsnrrv klkrfivspy drryrvwetf
       61 lvilviytaw vsplefgflk kpesplsitd nvvngffamd iiltffvayl dkttyllidd
      121 hkkigwkyss swlafdiist ipselaqkis pkplrsyglf nmlrlwrlrr vsalfsrmek
      181 dknynyfwvr caklicvtlf avhcagcfyy yiaaryhdpg rtwialslgd nflkqslwir
      241 yvtsmywsit tlttvgygdl hpvntremvf tifymlfnlg ltaylignmt nlvvhgtsrt
      301 rrfrdtiqaa ssfalrnqlp hrlqdqmlah lclkfrtdse glqqqeiids lpkairssis
      361 hylfyslmdk vylfrgvsnd llfqlvsemk aeyfppkedv ilqneaptdf yilvtgamdl
      421 lvlkngaeqv vgeakagdlc geigvlcyrp qlftvrtkrl cqllrlnrta flniiqanvg
      481 dgtiimnnll qhlkdmndpi megvlieten mlargrmdlp lnlcfaalrg ddlllnqllk
      541 rgldpnesdn ngrtalhiaa skgsencvll lldygadpnv kdsegnvplw eamlaghdkv
      601 akllkengas invgdvghya ctaaeqnnln llkeiirygg dltrprhngt talhvavceg
      661 nveivkylvd qgadidkpdv hgwtprelae qqgheeiktm fesrkemktq simsipekae
      721 tqylgrftse pvirpvapdv tdgswsqsrr rrrtsnfhns lfgimsaann mekdlllsvh
      781 kpkgvkdcvv nsarvviscp ekgqtigklv slpgnfeell emgakkfgii ggkvvskega
      841 eidgievird gdhlvfvsdg qmqhqqhsqv phcig
//
LOCUS       XP_040941598             330 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941598
VERSION     XP_040941598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085664.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..330
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37242
     Region          69..>216
                     /region_name="SSM4"
                     /note="E3 ubiquitin-protein ligase DOA10
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5183"
                     /db_xref="CDD:227510"
     Region          75..126
                     /region_name="RING_CH-C4HC3_MARCH"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); cd16495"
                     /db_xref="CDD:438158"
     CDS             1..330
                     /gene="LOC107938810"
                     /coded_by="XM_041085664.1:52..1044"
                     /db_xref="GeneID:107938810"
ORIGIN      
        1 mkkkpikfpr ktkiqglflg fiirsmsgel qlepagarnp sdsdpllgnq idspspasss
       61 eirsedieng sapccricle cdgeeddeli spcmckgtqq fvhracldhw rsvkegfafs
      121 hcttckaqfh lrvelfedns wrkikfrlfv ardvflvfla vqtviatmgg fayvmdkdga
      181 frksfsdgwd rilsnhpipf yycigvlaff vllgffglil hcsslnsndp rmagcqnccy
      241 gwgildcfpa smeacfalvv vfvvifailg iaygflaatm aiqriwqkhy hiltkreltk
      301 eyivedlhgs ytppkldpeh eerlkmmkll
//
LOCUS       XP_016727541             257 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-protein thioesterase 2 [Gossypium hirsutum].
ACCESSION   XP_016727541
VERSION     XP_016727541.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872052.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727541.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="acyl-protein thioesterase 2"
                     /calculated_mol_wt=27134
     Region          26..242
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..257
                     /gene="LOC107938811"
                     /coded_by="XM_016872052.2:213..986"
                     /db_xref="GeneID:107938811"
ORIGIN      
        1 msftgpsvgp ggrtarrale fgrtyvvrpk grhqativwl hglgdngssw sqlletlplp
       61 nikwicptap tqpisifggf pstawfnvge lsedapddie gldavaahva nllaaepadi
      121 klgvggfsmg aatslysatc fahgkygngn typanlsavv glsgwlpcsk tlkskiegnn
      181 eaagraeslp illchgkgdd vvpykfgeks sraltskgfk dmtfksyngl ghytipeeme
      241 evcawltskl glngrst
//
LOCUS       XP_016727542             257 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-protein thioesterase 2 [Gossypium hirsutum].
ACCESSION   XP_016727542
VERSION     XP_016727542.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872053.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727542.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="acyl-protein thioesterase 2"
                     /calculated_mol_wt=27134
     Region          26..242
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..257
                     /gene="LOC107938811"
                     /coded_by="XM_016872053.2:228..1001"
                     /db_xref="GeneID:107938811"
ORIGIN      
        1 msftgpsvgp ggrtarrale fgrtyvvrpk grhqativwl hglgdngssw sqlletlplp
       61 nikwicptap tqpisifggf pstawfnvge lsedapddie gldavaahva nllaaepadi
      121 klgvggfsmg aatslysatc fahgkygngn typanlsavv glsgwlpcsk tlkskiegnn
      181 eaagraeslp illchgkgdd vvpykfgeks sraltskgfk dmtfksyngl ghytipeeme
      241 evcawltskl glngrst
//
LOCUS       XP_016727543             257 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-protein thioesterase 2 [Gossypium hirsutum].
ACCESSION   XP_016727543
VERSION     XP_016727543.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727543.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="acyl-protein thioesterase 2"
                     /calculated_mol_wt=27134
     Region          26..242
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..257
                     /gene="LOC107938811"
                     /coded_by="XM_016872054.2:174..947"
                     /db_xref="GeneID:107938811"
ORIGIN      
        1 msftgpsvgp ggrtarrale fgrtyvvrpk grhqativwl hglgdngssw sqlletlplp
       61 nikwicptap tqpisifggf pstawfnvge lsedapddie gldavaahva nllaaepadi
      121 klgvggfsmg aatslysatc fahgkygngn typanlsavv glsgwlpcsk tlkskiegnn
      181 eaagraeslp illchgkgdd vvpykfgeks sraltskgfk dmtfksyngl ghytipeeme
      241 evcawltskl glngrst
//
LOCUS       XP_016727545             218 aa            linear   PLN 06-AUG-2024
DEFINITION  deSI-like protein At4g17486 [Gossypium hirsutum].
ACCESSION   XP_016727545
VERSION     XP_016727545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872056.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="deSI-like protein At4g17486"
                     /calculated_mol_wt=24190
     Region          19..156
                     /region_name="Peptidase_C97"
                     /note="PPPDE putative peptidase domain; pfam05903"
                     /db_xref="CDD:461775"
     CDS             1..218
                     /gene="LOC107938812"
                     /coded_by="XM_016872056.2:156..812"
                     /db_xref="GeneID:107938812"
ORIGIN      
        1 mgkgkvsnss hnesndnetk lvlniydlta mnnysywigf gifhsgievh gkeygfgahd
       61 fsisgvfeve pkccpgfsyr csislgiinm sssdfrafie nlasdyhgnt yhliskncnh
      121 fsddivyklt gkhiprwvnr larlgslfsc llpeslqatr vkkvpeyhqi egtetlstat
      181 psviaeteqe npllspkdrs idinfvkaap sdsktemp
//
LOCUS       XP_016727546             129 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727546
VERSION     XP_016727546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872057.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14380
     CDS             1..129
                     /gene="LOC107938813"
                     /coded_by="XM_016872057.2:164..553"
                     /db_xref="GeneID:107938813"
ORIGIN      
        1 matnlltfrp agiyasaipg htkqdpnrrk snplpsstnw wgplfgmsse pdyfdsdnkt
       61 dfkekrevep gtdtapksir skfspgsfte ekarqlrmmt tntssfhdam yhsaiasrla
      121 sdfkdrsdl
//
LOCUS       XP_016727526             137 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized RNA-binding protein C17H9.04c [Gossypium hirsutum].
ACCESSION   XP_016727526
VERSION     XP_016727526.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872037.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727526.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..137
                     /product="uncharacterized RNA-binding protein C17H9.04c"
                     /calculated_mol_wt=15063
     Region          9..28
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          57..78
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          103..132
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     cl02656"
                     /db_xref="CDD:413425"
     Region          107..128
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     CDS             1..137
                     /gene="LOC107938800"
                     /coded_by="XM_016872037.2:154..567"
                     /db_xref="GeneID:107938800"
ORIGIN      
        1 mscwvggdwm cgacqhqnfn kreacqrcgy pkyggpdvst ylynnsynsa evlagdwycs
       61 amncgvvnya srtncyrcgs lkndivgnyn tmgcdgtvpp gwktgdwict rygcgvhnya
      121 sriecfkckt prnfgga
//
LOCUS       XP_016732683             538 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 34 [Gossypium hirsutum].
ACCESSION   XP_016732683
VERSION     XP_016732683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..538
                     /product="calcium-dependent protein kinase 34"
                     /calculated_mol_wt=60381
     Region          79..336
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(85..89,93,106,108,141,157..160,164,166,202..203,205,
                     207..208,210,223..224,227,241..245,247)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(85..88,93,106,108,141,157..160,164,207..208,210,
                     223..224)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(89,164,166,202..203,205,207,227,241..245,247)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(223..231,241..245)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          377..516
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..538
                     /gene="LOC107943437"
                     /coded_by="XM_016877194.2:151..1767"
                     /db_xref="GeneID:107943437"
ORIGIN      
        1 mgnccsrgnp esltnelgva spenngnvsi csrnesfska sptqppasps eeaspkptpk
       61 pnpigtvlcr pmedvrntyt igkelgrgqf gvtylcthkv tgeqfackti akrklvnked
      121 iedvrrevqi mhhltgqpnv velkgayedk hsvhlvmelc aggelfdrii akghyseraa
      181 asllriivqi vhtchsmgvf hrdlkpenfl llnkeenspl katdfglslf ykpgdvfkdi
      241 vgsayyiape vlkrkygpea diwsigvmly illcgfppfw aesengifsa ilrgeidfes
      301 dpwpaispqa kdlvtkmlnl dpkqrltaqq vlnhpwiked geapdipldn avlarlkqfk
      361 amnnfkkval rviagclsee eiqglkemfk tidsdnsgti tleelkqgla kqgtklteye
      421 vkqlmeaada dsngtidyee fitatmhmnr mdreehlyra fqhfdkdnsg yitieeleqa
      481 ireygmhdgk dikeiisevd ndndgkinyd efvammrrgn peanpkkrrd dvmfdnsd
//
LOCUS       XP_016727520             510 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 71A1 [Gossypium hirsutum].
ACCESSION   XP_016727520
VERSION     XP_016727520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..510
                     /product="cytochrome P450 71A1"
                     /calculated_mol_wt=58067
     Region          73..502
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(109,134,138,146,193,309,312..313,316..317,376,
                     380..381,383,444..447,450..454,457..458)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(218,222,247,308,311..312,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..510
                     /gene="LOC107938793"
                     /coded_by="XM_016872031.2:28..1560"
                     /db_xref="GeneID:107938793"
ORIGIN      
        1 milqmdllnv vqvyinplfl smvllfslli wlkpakkknl nlppsppklp iignihhlgm
       61 lphrslrdls rnygsllllq lgynptvlvs spelvkeimk nhdvifsnrp rttavdilly
      121 ncgdmvfapy gefwrkvkki svlelfshqr vnsfqfvree evellinkir gaclkgqsin
      181 lsemlmvvan niasrcilsh kseeedgcsk fgqlgkrlsv lligfcigdm fpylrwvdvl
      241 tgyvpsmkal saefdafldh vieehralev dgqvsnkkdf vsiimqlqkd gmykmdltra
      301 nikailldmf vagsdtttat iewmmaellk hpnamkrvqq evrtvvgnks kiviedikkm
      361 eylkcivket lrlhpaapll iprrtsasvk lggydipsdt tilingwaih rdpkwwenpe
      421 gfiperfeds sntdfqgqdf hfipfgfgrr acpgmqfgvv tteyvvanll ywfdwklpag
      481 eipenldmae lygltchkkt plrviphfsf
//
LOCUS       XP_016732449             453 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 19, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016732449
VERSION     XP_016732449.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732449.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..453
                     /product="nudix hydrolase 19, chloroplastic"
                     /calculated_mol_wt=49921
     Region          98..432
                     /region_name="NPY1"
                     /note="NADH pyrophosphatase NudC, Nudix superfamily
                     [Nucleotide transport and metabolism]; COG2816"
                     /db_xref="CDD:442065"
     CDS             1..453
                     /gene="LOC107943216"
                     /coded_by="XM_016876960.2:16..1377"
                     /db_xref="GeneID:107943216"
ORIGIN      
        1 mvkraamlsv slffsssssh llflsktltk rtcfsslatm sinlnahafa gnpirsktlk
       61 ahdplspssa fqslkthllq npettslppp pksplfkvlp frkgrplass sitgnndddv
      121 pswhlgwisl pdckyflgkc gmdltedslv ylgskieddv vywavdvsge srlvpelgsk
      181 qfcfvelrtl mvatdwsdsi amgelaiagh arallewhnl srfcghcgek tipkeagrrk
      241 qcsnesckkr iyprvdpvvi mlvidrendr allgrqsrfv prmwsclagf iepgesleea
      301 vrretyeeag ievgevvyhs sqpwpvgpss ipcqlmvgff afaksleinv dkeeledaqw
      361 hsredvrkal avaeykkaqk ttaakvdqmc kgvekgqsls adfnvesgel apmffpgpfa
      421 iahhlistwa nqdvptdgvk agskqpsssi lnl
//
LOCUS       XP_016732440             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732440
VERSION     XP_016732440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876951.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..130
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14332
     Region          <75..130
                     /region_name="PLN03107"
                     /note="eukaryotic translation initiation factor 5A;
                     Provisional"
                     /db_xref="CDD:215580"
     CDS             1..130
                     /gene="LOC107943209"
                     /coded_by="XM_016876951.2:387..779"
                     /db_xref="GeneID:107943209"
ORIGIN      
        1 mktlatisqv gllhrrrqmc lrplttvlsp aiapspmvnv ilmafsqdin slkhialmea
       61 kmkklsdlls ktieqtkenv vkklaltyee meqeckeimd gfaegkdlvv svmsamgeeq
      121 icalkdigpk
//
LOCUS       XP_016732446             528 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 34 [Gossypium hirsutum].
ACCESSION   XP_016732446
VERSION     XP_016732446.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876957.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..528
                     /product="zinc finger CCCH domain-containing protein 34"
                     /calculated_mol_wt=60537
     Region          7..>109
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     CDS             1..528
                     /gene="LOC107943213"
                     /coded_by="XM_016876957.2:173..1759"
                     /db_xref="GeneID:107943213"
ORIGIN      
        1 meeqflkrnt dcvyflaspf tckkgldcey rhsevarlnp rdcwywlagn cinptcgfrh
       61 ppldvhsqvp sesaalpyqc staanktnlp cyfyfngfcn kgdrcsflhg pddstitvns
      121 lktgalpldr ktfvendvga vqtethpnps ktapnsikdt gvqlktnlqq pvpktmikrs
      181 vspktsvfdl eqagfvssqs lllkegitqt gspictdesl eeqlddpfep eerwessegf
      241 dvlvdnksed ldygndseyq kdpeeeqtdy ffsydyedsv qhetrypdle fsydrdvyda
      301 yegsdneyif nnprnpfvhp gdkrrldsmf sqkrrrllpf ersidvdlrd ylskrrvvkg
      361 nplkclsrse yshlisrsle rprrrsmgwk lsgrlaskvg khyiestggq vgfrngtnrh
      421 gwlkhlepnr sirrpyrekk lprrksvsse vsrnlisrer kyedastaft gpktlaqire
      481 ekrkteengg kmrhsiitas adfqgpkpls eilkdkerla kkgtnfls
//
LOCUS       XP_016732439             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g34160 [Gossypium hirsutum].
ACCESSION   XP_016732439
VERSION     XP_016732439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876950.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="uncharacterized protein At2g34160"
                     /calculated_mol_wt=14640
     Region          21..83
                     /region_name="Alba"
                     /note="pfam01918"
                     /db_xref="CDD:426509"
     CDS             1..132
                     /gene="LOC107943207"
                     /coded_by="XM_016876950.2:257..655"
                     /db_xref="GeneID:107943207"
ORIGIN      
        1 meeitqgvnn inlaadshkk nriqvsntkk plffyvnlak rymqqyneve lsalgmaiat
       61 vvtiaeilkn nglavekkit tttvdmkeds rgrpvqkaki eillgktenf delmaaaaee
      121 rdgvvveeeq qt
//
LOCUS       XP_016732444             383 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 49 [Gossypium hirsutum].
ACCESSION   XP_016732444
VERSION     XP_016732444.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="chaperone protein dnaJ 49"
                     /calculated_mol_wt=42250
     Region          134..>263
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          285..373
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..383
                     /gene="LOC107943212"
                     /coded_by="XM_016876955.2:263..1414"
                     /db_xref="GeneID:107943212"
ORIGIN      
        1 mdgnkddalk clkigkdald agdraralkf ltkarrldps lpienllsaa eggksddrpa
       61 sepvgsakdp sgsspskpsd qpsirrrnip ngsaasasas spasasasas asaaggtyte
      121 eqivivkqir kkkdyyeilg lekscsvddi rkayrklslk vhpdknkapg aeeafkavsk
      181 afqclsnees rkkydlvgsd epvyerrasp frgagngfng fydtdfdade ifrnfffggm
      241 ppattqfrsf nfgpgmgarm gdqgstgfni rmliqllpvl lillfsflps sepvfslsrs
      301 ypyeykfttk ngvnyyvrst kfeqdyptns vervrieerv erdyysvlaq ncrfelqrqq
      361 wgfiretphc dllekfqsaa aaa
//
LOCUS       XP_016732445             383 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 49 [Gossypium hirsutum].
ACCESSION   XP_016732445
VERSION     XP_016732445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876956.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="chaperone protein dnaJ 49"
                     /calculated_mol_wt=42250
     Region          134..>263
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          285..373
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..383
                     /gene="LOC107943212"
                     /coded_by="XM_016876956.2:283..1434"
                     /db_xref="GeneID:107943212"
ORIGIN      
        1 mdgnkddalk clkigkdald agdraralkf ltkarrldps lpienllsaa eggksddrpa
       61 sepvgsakdp sgsspskpsd qpsirrrnip ngsaasasas spasasasas asaaggtyte
      121 eqivivkqir kkkdyyeilg lekscsvddi rkayrklslk vhpdknkapg aeeafkavsk
      181 afqclsnees rkkydlvgsd epvyerrasp frgagngfng fydtdfdade ifrnfffggm
      241 ppattqfrsf nfgpgmgarm gdqgstgfni rmliqllpvl lillfsflps sepvfslsrs
      301 ypyeykfttk ngvnyyvrst kfeqdyptns vervrieerv erdyysvlaq ncrfelqrqq
      361 wgfiretphc dllekfqsaa aaa
//
LOCUS       XP_016732447             283 aa            linear   PLN 06-AUG-2024
DEFINITION  heme oxygenase 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016732447
VERSION     XP_016732447.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876958.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732447.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..283
                     /product="heme oxygenase 1, chloroplastic"
                     /calculated_mol_wt=32432
     Region          74..281
                     /region_name="HemeO"
                     /note="heme oxygenase in eukaryotes and some bacteria;
                     cd19165"
                     /db_xref="CDD:350856"
     Site            order(80,87,90..91,96,100,201..203,209..210,214,241,245,
                     271,274,278)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:350856"
     Region          194..220
                     /region_name="kinked helix"
                     /note="kinked helix [structural motif]"
                     /db_xref="CDD:350856"
     CDS             1..283
                     /gene="LOC107943214"
                     /coded_by="XM_016876958.2:544..1395"
                     /db_xref="GeneID:107943214"
ORIGIN      
        1 masltsisqs htllkkpnft psiphnlsss ftprdflfsk tqsfklpqma srsyvvsast
       61 tetprkrypg gakgfveemr fvamklhtke qakegekevk qpeehsvpkw epsidgylkf
      121 lvdsklvydt lesiidkaaf piyaefrntg lerseklakd lqwfeeqgya irepsspgit
      181 yaeylkeisd kdpqafichf yntyfahsag grmigkkvaq qilnnrelef ykwdgdlsql
      241 lqnvrdklnk vaeswtrdek nhcleeteks fkhsgeilrl ils
//
LOCUS       XP_016732448             131 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016732448
VERSION     XP_016732448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876959.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..131
                     /product="protein BUNDLE SHEATH DEFECTIVE 2,
                     chloroplastic"
                     /calculated_mol_wt=13811
     Region          <63..>120
                     /region_name="PRK14294"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:237664"
     CDS             1..131
                     /gene="LOC107943215"
                     /coded_by="XM_016876959.2:200..595"
                     /db_xref="GeneID:107943215"
ORIGIN      
        1 mansvcftsv csfsipckpg iiindsiprk viganevfks skgarfqsle akavddnqrt
       61 kpksivcadc egngakqcsq ckgtgvnsvd hyngrfkagg lcwlcrgkre ilcgncngag
      121 figgfmstfd d
//
LOCUS       XP_016732442             404 aa            linear   PLN 06-AUG-2024
DEFINITION  equilibrative nucleotide transporter 8 [Gossypium hirsutum].
ACCESSION   XP_016732442
VERSION     XP_016732442.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876953.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..404
                     /product="equilibrative nucleotide transporter 8"
                     /calculated_mol_wt=44407
     Region          29..402
                     /region_name="Nucleoside_tran"
                     /note="Nucleoside transporter; cl15430"
                     /db_xref="CDD:472807"
     CDS             1..404
                     /gene="LOC107943210"
                     /coded_by="XM_016876953.2:975..2189"
                     /db_xref="GeneID:107943210"
ORIGIN      
        1 mqemenpkas tdhqleprdt yrvayvihfl lgagnllpwn afitavdyfg ylypakhvek
       61 vfsvgymsts vlvlvvmmss gsccgtnlal trrfrlnmgf stfllslmva ptidwvwqgg
      121 wseekqsaay fmtvtavvic gladgliags ligsagklpk qymqaifagt assgvlvsil
      181 rittkaslpq tpaglrasah fyfivsatiq lccilccnll yklpvmqqhy rilgddpfcs
      241 spqfwtvark icwpalgilm iyvvtlsifp gfiaenlesk flrdwypvll itvynvadfm
      301 gksltaiyvl qsikkatwac isrllfyplf taclhgpkwl kgeipvvvlt fmlgltngyl
      361 tsvlmilapk tvpvseaels aivlvvflgi glvggsvlgw fwii
//
LOCUS       XP_016732443             283 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732443
VERSION     XP_016732443.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876954.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732443.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..283
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31236
     Region          156..236
                     /region_name="PilF"
                     /note="Type IV pilus assembly protein PilF/PilW [Cell
                     motility, Extracellular structures]; COG3063"
                     /db_xref="CDD:442297"
     Region          167..198
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          203..232
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..283
                     /gene="LOC107943211"
                     /coded_by="XM_016876954.2:919..1770"
                     /db_xref="GeneID:107943211"
ORIGIN      
        1 mllrsastpl lnswvphske pspeldsshl iartrsvsfr ilcsssssss isvgsgddss
       61 rrmtravset dlrelvvpkm revkrnngil ntifveeeed vereeagfqw rrtaslavke
      121 eceiggadgg grsdsgddne wsswdsnngn dgtelyyqkm ieanpgnsll lsnyarflke
      181 vrgdfvkaee ycgrailanp idgnvlsmya dliwethkds sraetyfdqa vkaapddcfv
      241 lasyarflwn aeeeedgenf sevpepsfih gvssmppplt aas
//
LOCUS       XP_040941599             429 aa            linear   PLN 06-AUG-2024
DEFINITION  blue copper protein [Gossypium hirsutum].
ACCESSION   XP_040941599
VERSION     XP_040941599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085665.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..429
                     /product="blue copper protein"
                     /calculated_mol_wt=45287
     Region          25..127
                     /region_name="Phytocyanin"
                     /note="Phytocyanins are plant blue or type I copper
                     proteins; cd04216"
                     /db_xref="CDD:259878"
     Region          151..248
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     Region          268..369
                     /region_name="Stellacyanin"
                     /note="Stellacyanin is a subclass of phytocyanins, a plant
                     type I copper protein; cd13920"
                     /db_xref="CDD:259987"
     CDS             1..429
                     /gene="LOC121212580"
                     /coded_by="XM_041085665.1:186..1475"
                     /db_xref="GeneID:121212580"
ORIGIN      
        1 mggkitmaal lvilaanllq stygrtytvg dstgwriptn nnddfyddwa dnkdflvgdv
       61 lvfnftngqh nvvevteggy dacnaanpvs tvstgparit lnrtgeyyfi cgipghcsag
      121 qklnvevrng nptggvtpst pitpttttyt vgdstgwrvp tnnddfyedw adnkhfvvgd
      181 vlvfnfttgq hnvaevteda yddcntanai stlttgpari tlnktgdhyf icsvpghcsa
      241 gqklkvevrt gnttggvaps psvtpstttf tvgdstgwrv pttnddfyed wadnkhfvvg
      301 dvlvfnfttg qhnvaevted gyddcnaana istlttgpar vtlnstgdhy ficsipghcs
      361 agqklkvevr ngnrtstspt pgtpsaaapg tpsgttngts sspgtntass hvatlslvff
      421 msialtlfc
//
LOCUS       XP_040941600             236 aa            linear   PLN 06-AUG-2024
DEFINITION  cucumber peeling cupredoxin [Gossypium hirsutum].
ACCESSION   XP_040941600
VERSION     XP_040941600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085666.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..236
                     /product="cucumber peeling cupredoxin"
                     /calculated_mol_wt=24104
     Region          25..125
                     /region_name="Stellacyanin"
                     /note="Stellacyanin is a subclass of phytocyanins, a plant
                     type I copper protein; cd13920"
                     /db_xref="CDD:259987"
     CDS             1..236
                     /gene="LOC121212581"
                     /coded_by="XM_041085666.1:236..946"
                     /db_xref="GeneID:121212581"
ORIGIN      
        1 mggkismaaf fvvlaanvlq stygatykvg gstgwrvptn idfyedwadd kvfvvgdalv
       61 fnfttgkhnv avvteaayea cnttdtitii cdgparitln rtgnfyfica vpghcsggqk
      121 lrvevrngnr haaapapgpm pnskppsaat psptphgtss pprpsatprg tssppppsat
      181 ppgtsspppp saatpgtpss tgrgtssppp eansasllva tlypilylsi alvllc
//
LOCUS       XP_040941601             208 aa            linear   PLN 06-AUG-2024
DEFINITION  cucumber peeling cupredoxin [Gossypium hirsutum].
ACCESSION   XP_040941601
VERSION     XP_040941601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085667.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..208
                     /product="cucumber peeling cupredoxin"
                     /calculated_mol_wt=21244
     Region          27..127
                     /region_name="Phytocyanin"
                     /note="Phytocyanins are plant blue or type I copper
                     proteins; cd04216"
                     /db_xref="CDD:259878"
     Site            order(70,111,116,121)
                     /site_type="other"
                     /note="Type 1 (T1) Cu binding site [ion binding]"
                     /db_xref="CDD:259878"
     CDS             1..208
                     /gene="LOC121212582"
                     /coded_by="XM_041085667.1:246..872"
                     /db_xref="GeneID:121212582"
ORIGIN      
        1 msgkitmama alfvvlaanv lqstngatyt vgdstgwkvp tnndfyddwa dnkifvvgdv
       61 lvfnfttgqh dvaevtetay dacntantis tvstgparit lnrtgdfyfi cafpghcsgg
      121 qklnvevrng nnrtaavpap gpsptttpva tspttstppt aatptspgtp tatapgtssp
      181 ppgtnsassl vstlspvffm aialvlmc
//
LOCUS       XP_040941602             361 aa            linear   PLN 06-AUG-2024
DEFINITION  uclacyanin 1 [Gossypium hirsutum].
ACCESSION   XP_040941602
VERSION     XP_040941602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085668.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..361
                     /product="uclacyanin 1"
                     /calculated_mol_wt=36455
     Region          27..126
                     /region_name="Stellacyanin"
                     /note="Stellacyanin is a subclass of phytocyanins, a plant
                     type I copper protein; cd13920"
                     /db_xref="CDD:259987"
     Region          167..268
                     /region_name="Stellacyanin"
                     /note="Stellacyanin is a subclass of phytocyanins, a plant
                     type I copper protein; cd13920"
                     /db_xref="CDD:259987"
     CDS             1..361
                     /gene="LOC121212584"
                     /coded_by="XM_041085668.1:168..1253"
                     /db_xref="GeneID:121212584"
ORIGIN      
        1 mgrrlntmfl vtvaiaalvq sslaqrdyvv gdalgwvipp gpsvyttwaa nktftagdtl
       61 vfnflngshd vakvtkanfd scnggnalll ltnspanvtl netgshyfic gfsghcgagq
      121 klavnvsaag sspapqpsaa pprgsspapl psspspapvs gptrspttyt vgdnlgwtvp
      181 tsgasmyqtw angknfmigd ilvfnyvtgt hnvaevtraa yqpcntsnll snfttgptri
      241 tlrtagehfy icavpghcaa gqklainvtg sstatppsss spspspspsp spstatppss
      301 sspspstatp psstatptnp stpspagdnn ntpstpgnsa tslsvaglta tlpclivafl
      361 m
//
LOCUS       XP_040941603             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941603
VERSION     XP_040941603.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085669.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23153
     CDS             1..203
                     /gene="LOC121212585"
                     /coded_by="XM_041085669.1:173..784"
                     /db_xref="GeneID:121212585"
ORIGIN      
        1 mqkpgprpyd cvrrawhset hqlirgsmvq qilrlaiqth ssatkknker rvkilivivk
       61 aeeimyskan seneymnpet lwdrvndaid tiirrdkstk tgellpscve avlnlgcylv
      121 rysrsqqhcn prtyltprap ehvslaprif degseeccpr fppvqsvria tdvnsnisvs
      181 qtnhswshfl seivhmtvtg rrg
//
LOCUS       XP_040941604             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941604
VERSION     XP_040941604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085670.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23153
     CDS             1..203
                     /gene="LOC121212585"
                     /coded_by="XM_041085670.1:173..784"
                     /db_xref="GeneID:121212585"
ORIGIN      
        1 mqkpgprpyd cvrrawhset hqlirgsmvq qilrlaiqth ssatkknker rvkilivivk
       61 aeeimyskan seneymnpet lwdrvndaid tiirrdkstk tgellpscve avlnlgcylv
      121 rysrsqqhcn prtyltprap ehvslaprif degseeccpr fppvqsvria tdvnsnisvs
      181 qtnhswshfl seivhmtvtg rrg
//
LOCUS       XP_040941605             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941605
VERSION     XP_040941605.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085671.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23153
     CDS             1..203
                     /gene="LOC121212585"
                     /coded_by="XM_041085671.1:173..784"
                     /db_xref="GeneID:121212585"
ORIGIN      
        1 mqkpgprpyd cvrrawhset hqlirgsmvq qilrlaiqth ssatkknker rvkilivivk
       61 aeeimyskan seneymnpet lwdrvndaid tiirrdkstk tgellpscve avlnlgcylv
      121 rysrsqqhcn prtyltprap ehvslaprif degseeccpr fppvqsvria tdvnsnisvs
      181 qtnhswshfl seivhmtvtg rrg
//
LOCUS       XP_040941606             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941606
VERSION     XP_040941606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085672.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23153
     CDS             1..203
                     /gene="LOC121212585"
                     /coded_by="XM_041085672.1:173..784"
                     /db_xref="GeneID:121212585"
ORIGIN      
        1 mqkpgprpyd cvrrawhset hqlirgsmvq qilrlaiqth ssatkknker rvkilivivk
       61 aeeimyskan seneymnpet lwdrvndaid tiirrdkstk tgellpscve avlnlgcylv
      121 rysrsqqhcn prtyltprap ehvslaprif degseeccpr fppvqsvria tdvnsnisvs
      181 qtnhswshfl seivhmtvtg rrg
//
LOCUS       XP_040941607             281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941607
VERSION     XP_040941607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085673.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=31414
     Region          48..82
                     /region_name="CUE"
                     /note="CUE domain found in ubiquitin-binding CUE proteins;
                     cd14279"
                     /db_xref="CDD:270465"
     Region          <181..>258
                     /region_name="GAS"
                     /note="Growth-arrest specific micro-tubule binding;
                     pfam13851"
                     /db_xref="CDD:464001"
     CDS             1..281
                     /gene="LOC121212586"
                     /coded_by="XM_041085673.1:375..1220"
                     /db_xref="GeneID:121212586"
ORIGIN      
        1 msaivsgkrs ffeelsstpp askrircssr ftssfspsss ppsppsflid qlisifphmd
       61 kqvleralee cgddldsair slnelclgsa drnaaaadkt gvelegnvqi qtqcitangd
      121 vptkeqtspe afsmdgsdwv elfvremlna sniddarara sralevfeks iharagaeva
      181 qnvhqenmml keqletliqe ntilkravav qherqkeyen qsqelqhlkq visqyqeqlr
      241 tleinnyalt mhlkqaqqss nipgrfnpdv fylycslcrm v
//
LOCUS       XP_040941608             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941608
VERSION     XP_040941608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085674.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..271
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=30182
     Region          48..82
                     /region_name="CUE"
                     /note="CUE domain found in ubiquitin-binding CUE proteins;
                     cd14279"
                     /db_xref="CDD:270465"
     Region          <181..>258
                     /region_name="GAS"
                     /note="Growth-arrest specific micro-tubule binding;
                     pfam13851"
                     /db_xref="CDD:464001"
     CDS             1..271
                     /gene="LOC121212586"
                     /coded_by="XM_041085674.1:380..1195"
                     /db_xref="GeneID:121212586"
ORIGIN      
        1 msaivsgkrs ffeelsstpp askrircssr ftssfspsss ppsppsflid qlisifphmd
       61 kqvleralee cgddldsair slnelclgsa drnaaaadkt gvelegnvqi qtqcitangd
      121 vptkeqtspe afsmdgsdwv elfvremlna sniddarara sralevfeks iharagaeva
      181 qnvhqenmml keqletliqe ntilkravav qherqkeyen qsqelqhlkq visqyqeqlr
      241 tleinnyalt mhlkqaqqss nipgrfnpdv f
//
LOCUS       XP_040941609             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941609
VERSION     XP_040941609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085675.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..271
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=30182
     Region          48..82
                     /region_name="CUE"
                     /note="CUE domain found in ubiquitin-binding CUE proteins;
                     cd14279"
                     /db_xref="CDD:270465"
     Region          <181..>258
                     /region_name="GAS"
                     /note="Growth-arrest specific micro-tubule binding;
                     pfam13851"
                     /db_xref="CDD:464001"
     CDS             1..271
                     /gene="LOC121212586"
                     /coded_by="XM_041085675.1:375..1190"
                     /db_xref="GeneID:121212586"
ORIGIN      
        1 msaivsgkrs ffeelsstpp askrircssr ftssfspsss ppsppsflid qlisifphmd
       61 kqvleralee cgddldsair slnelclgsa drnaaaadkt gvelegnvqi qtqcitangd
      121 vptkeqtspe afsmdgsdwv elfvremlna sniddarara sralevfeks iharagaeva
      181 qnvhqenmml keqletliqe ntilkravav qherqkeyen qsqelqhlkq visqyqeqlr
      241 tleinnyalt mhlkqaqqss nipgrfnpdv f
//
LOCUS       XP_040941610            1119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941610
VERSION     XP_040941610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085676.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1119
                     /product="uncharacterized protein"
                     /calculated_mol_wt=125567
     Region          37..369
                     /region_name="Rif1_N"
                     /note="Rap1-interacting factor 1 N terminal; pfam12231"
                     /db_xref="CDD:463499"
     CDS             1..1119
                     /gene="LOC121212588"
                     /coded_by="XM_041085676.1:99..3458"
                     /db_xref="GeneID:121212588"
ORIGIN      
        1 mssiisnqie eikifissns ktdqslgyst llhfqeqssd sppsiqaliq ssrclinsiv
       61 sdihnedeei aaqalkclgf miyhpslvat ipaedgkrvl eslaklitft kmksvcnlgv
      121 wcisiqqfda tllaacfdtl lqavvhaldn pigslsttfe amqavaklaa qmsemmress
      181 hlwvppiyrr llsidkrerd msercllkir ptilppsisl skaiiedmre klltgmkdwl
      241 dkgmkvqtvq awgwficflg sgalknrhlv ndmlkvleqt fsdhnpqvqi aslvawqgli
      301 dalvhpqils ckknriqqlq tspgksselv lngfskslkl avapligiis skcdvsvlls
      361 clntwcyllh kldifvnsps vinvvldpmf qaifkigpds ksirlwnfcl dlledcistk
      421 csdlnsdpkn qvnlhlsart fipgsgrysw nqypikwlpw dlsqldfylk misiiithva
      481 tataapeskk svcdaavrif rfvlkgvqme frnpsnnydn imfclntils fmkklgedas
      541 sdgggdlfnt slylieatme elepsimesp lykvaldisy vgsldsvkhs kiphrcsfmd
      601 mfspmvyltv lylglvvqlt lntpemelil qrlqrfykfv lssddplesf lasvgflyah
      661 mgfkymeiwm vmvtclngci dgmkdlslfk tdsdnsfhra ichllsypfi lfscakkdit
      721 llrasnspke sfvlserkle qaievwksly gsvcvaclks satntfshdl camlnscfgg
      781 ngsmfqynse lgykdlelac lsfsgkvlvc ileqklasdt igrefvgvcn essginnifv
      841 fasrvmkfmy vnmgrepasg lvssrvfstl tcfisclhsk qdilsffeii sgpllqwlsh
      901 qeikdenakd qlgilwaesl nclqrsqpll tfdssflglq asllektldh pntsvsdpti
      961 ifwnstygkq isleypqnll hvlhrlsrng rislynrsks fvarcstleh dtvttpwcck
     1021 itptqksskr velteegmip gsnqnnkpps nskrkrvelt ehqkevrraq qgrerdcngh
     1081 gpgvrtytnl dfsqgnqesq dsqgiqdsea mlemlrrvg
//
LOCUS       XP_040941611             857 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 10 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941611
VERSION     XP_040941611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085677.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..857
                     /product="CCR4-NOT transcription complex subunit 10
                     isoform X1"
                     /calculated_mol_wt=93469
     Region          358..384
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(396..397,400..401,403,434,446..447,450..451,
                     453..454,477,480..481,484..485,488)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          396..427
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          432..471
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          659..>839
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          <774..839
                     /region_name="PilF"
                     /note="Type IV pilus assembly protein PilF/PilW [Cell
                     motility, Extracellular structures]; COG3063"
                     /db_xref="CDD:442297"
     CDS             1..857
                     /gene="LOC121212589"
                     /coded_by="XM_041085677.1:337..2910"
                     /db_xref="GeneID:121212589"
ORIGIN      
        1 mdsrdssssl vpnrdgtagd ddgvlsvtaa lakdaalyfq srklaecvdv ltelktkkeg
       61 dpkvlhniai aeflrdgcsd pkkmlevlnn ikkrseelah aseeqvesgs dvgnkvtsgs
      121 kesssttrqv sashsastiy taefdtsvis lniaviwfhl heyakalsvl eplykniepv
      181 dettalhicl llldvllasc dasksadvfn ylekafgvgn vsqgdngnil lqqstnlvgk
      241 lssvpssslv sdvstpelaa svkasenpls rtlsedplde mfstldiagq nlsrsadlts
      301 pkelprttvd rsifgvdlkl klqlykvrfl lltrniklak revkhatnia rgresstall
      361 lkaqleyarg nhrkaikllm astnmtdaai ssmfnnnlgc ifyklgkyht savffskals
      421 ncsslqkkkp lklftfsqdk slhityncgl qylacgkpii aarcfqkasl ifykrpllwl
      481 rlaecclmav ekglvegsrp psnrseirvd vigkgrwrkl liddgisrsr lvdsvgkddw
      541 tlggdqepkl slplarqcly nalhllncsd sshlksllps nssleenesc dgassknpnh
      601 kslvgidskp stlsiglvns ngdlkepktg tnqemihnsv ayfadicrke nqmmkqalla
      661 nlayielele nplkalsaar sllelpgcsr iyiflghvya aealcllnkp keaaehlsiy
      721 lsgpnkvesp fsqedceqwl vekpidceep ngggaaataa knpspegtqe fmflkpeeac
      781 gtlyanlaal yatqgeldra hqfttqalsl lpnsteatmt aiyidlvlgk sqealsklkh
      841 cshvrflssn lqsnkss
//
LOCUS       XP_040941612             856 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 10 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941612
VERSION     XP_040941612.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085678.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..856
                     /product="CCR4-NOT transcription complex subunit 10
                     isoform X2"
                     /calculated_mol_wt=93341
     Region          357..383
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(395..396,399..400,402,433,445..446,449..450,
                     452..453,476,479..480,483..484,487)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          395..426
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          431..470
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          658..>838
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          <773..838
                     /region_name="PilF"
                     /note="Type IV pilus assembly protein PilF/PilW [Cell
                     motility, Extracellular structures]; COG3063"
                     /db_xref="CDD:442297"
     CDS             1..856
                     /gene="LOC121212589"
                     /coded_by="XM_041085678.1:337..2907"
                     /db_xref="GeneID:121212589"
ORIGIN      
        1 mdsrdssssl vpnrdgtagd ddgvlsvtaa lakdaalyfq srklaecvdv ltelktkkeg
       61 dpkvlhniai aeflrdgcsd pkkmlevlnn ikrseelaha seeqvesgsd vgnkvtsgsk
      121 esssttrqvs ashsastiyt aefdtsvisl niaviwfhlh eyakalsvle plykniepvd
      181 ettalhicll lldvllascd asksadvfny lekafgvgnv sqgdngnill qqstnlvgkl
      241 ssvpssslvs dvstpelaas vkasenplsr tlsedpldem fstldiagqn lsrsadltsp
      301 kelprttvdr sifgvdlklk lqlykvrfll ltrniklakr evkhatniar gresstalll
      361 kaqleyargn hrkaikllma stnmtdaais smfnnnlgci fyklgkyhts avffskalsn
      421 csslqkkkpl klftfsqdks lhityncglq ylacgkpiia arcfqkasli fykrpllwlr
      481 laecclmave kglvegsrpp snrseirvdv igkgrwrkll iddgisrsrl vdsvgkddwt
      541 lggdqepkls lplarqclyn alhllncsds shlksllpsn ssleenescd gassknpnhk
      601 slvgidskps tlsiglvnsn gdlkepktgt nqemihnsva yfadicrken qmmkqallan
      661 layielelen plkalsaars llelpgcsri yiflghvyaa ealcllnkpk eaaehlsiyl
      721 sgpnkvespf sqedceqwlv ekpidceepn gggaaataak npspegtqef mflkpeeacg
      781 tlyanlaaly atqgeldrah qfttqalsll pnsteatmta iyidlvlgks qealsklkhc
      841 shvrflssnl qsnkss
//
LOCUS       XP_040941613             745 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 10 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941613
VERSION     XP_040941613.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085679.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..745
                     /product="CCR4-NOT transcription complex subunit 10
                     isoform X3"
                     /calculated_mol_wt=80861
     Region          547..>727
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          <662..727
                     /region_name="PilF"
                     /note="Type IV pilus assembly protein PilF/PilW [Cell
                     motility, Extracellular structures]; COG3063"
                     /db_xref="CDD:442297"
     CDS             1..745
                     /gene="LOC121212589"
                     /coded_by="XM_041085679.1:337..2574"
                     /db_xref="GeneID:121212589"
ORIGIN      
        1 mdsrdssssl vpnrdgtagd ddgvlsvtaa lakdaalyfq srklaecvdv ltelktkkeg
       61 dpkvlhniai aeflrdgcsd pkkmlevlnn ikkrseelah aseeqvesgs dvgnkvtsgs
      121 kesssttrqv sashsastiy taefdtsvis lniaviwfhl heyakalsvl eplykniepv
      181 dettalhicl llldvllasc dasksadvfn ylekafgvgn vsqgdngnil lqqstnlvgk
      241 lssvpssslv sdvstpelaa svkasenpls rtlsedplde mfstldiagq nlsrsadlts
      301 pkelprttvd rsifgvdlkl klqlykdksl hityncglqy lacgkpiiaa rcfqkaslif
      361 ykrpllwlrl aecclmavek glvegsrpps nrseirvdvi gkgrwrklli ddgisrsrlv
      421 dsvgkddwtl ggdqepklsl plarqclyna lhllncsdss hlksllpsns sleenescdg
      481 assknpnhks lvgidskpst lsiglvnsng dlkepktgtn qemihnsvay fadicrkenq
      541 mmkqallanl ayielelenp lkalsaarsl lelpgcsriy iflghvyaae alcllnkpke
      601 aaehlsiyls gpnkvespfs qedceqwlve kpidceepng ggaaataakn pspegtqefm
      661 flkpeeacgt lyanlaalya tqgeldrahq fttqalsllp nsteatmtai yidlvlgksq
      721 ealsklkhcs hvrflssnlq snkss
//
LOCUS       XP_040941614             921 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase FERONIA [Gossypium hirsutum].
ACCESSION   XP_040941614
VERSION     XP_040941614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085680.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..921
                     /product="receptor-like protein kinase FERONIA"
                     /calculated_mol_wt=102619
     Region          62..446
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          561..824
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(561..565,569,582,584,613,629..632,636,638,680,682,
                     684..685,687,698,701,720..723)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(561..565,569,582,584,613,629..632,636,680,682,
                     684..685,687,698)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(565,636,638,680,682,684,701,720..723)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(697..704,715..716,718..723)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..921
                     /gene="LOC107943742"
                     /coded_by="XM_041085680.1:261..3026"
                     /db_xref="GeneID:107943742"
ORIGIN      
        1 mhfslvlcls lameipsrtt fsvqnllfhs flhlfffiqy lavpvtaefn vtpynpienf
       61 aincgssmgg kswddrpwvg dgngkfslie qqnnnnkpsv skaasqlsss vdtfpystar
      121 lsysqftysi pltdgqkfir lhfyptsypd fgdpskkaff svkagdftll snfsaslhah
      181 devtffkefc vnldegqsln ltftpspyit dsyafingie vvsmpnnlyy tpasyervph
      241 fvgqaqgqtf hlenntalen myrinvaggq sispkndtgm frswfnddyr yltirnpsal
      301 pvnttidlki sspmqsfaap kevyitartm gtnktkneny qltwefpvds gfnyfvrlhf
      361 cefqieitke gervfeilla nasaenqadv ifwsggngip vyrdyvvaig nigkekqqnl
      421 siamhpspew ktkysdailn gleifklsng fnlsgpnpdp dttspdpdtt nqqgysspts
      481 nnkvvsgivg gvisgfvils llcffvyrrk rkvkdtdssk gvpvmeltkc gssslpselc
      541 syfslaeikr atnnfdnvfi igvggfgnvy kgfidggatq vaikrlnpes qqgahefrte
      601 iemlsqlrhl hlvsligycn dggemiliyd ymangtlrdh lynsknpplp wkqrieiclg
      661 aaqglqylhs gakhtiihrd vkttnillde kwvakvsdfg lsrigptnms qthvstvvkg
      721 sfgyldpeys rrgklteksd vysygvvlce ilcarpaihr saekalvnla aqaqechrng
      781 tlynmidpfl kgkiaveclk kftevvmscl hddgmerpsm davvwglqfa lqlqetaeee
      841 glkpnaiagi eedideespi iayamedesg evfssigdhv mnsrsttsfs ltsdersfir
      901 kgsdkhlska vfseirdpqg r
//
LOCUS       XP_040941615             344 aa            linear   PLN 06-AUG-2024
DEFINITION  heptahelical transmembrane protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941615
VERSION     XP_040941615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085681.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="heptahelical transmembrane protein 1"
                     /calculated_mol_wt=38937
     Region          71..329
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..344
                     /gene="LOC121212591"
                     /coded_by="XM_041085681.1:159..1193"
                     /db_xref="GeneID:121212591"
ORIGIN      
        1 mdstldsklv akpveagklk krvrwpsrll psssyglvsy kelpeymkdn efivnyyran
       61 wplkealfsi frwhnetlnv wthlfgfllf lgltmanlie vpqvlvliaf itrsspvsgn
      121 vnvsqdlvlk pitasesdit ltvtpvtrwp fyvllagsmf cllssslchl fschshrlni
      181 mlmrmdytgi aimiiatffp pvyysfpcdp qwqfiylggi tvlglftivt llspamstnk
      241 frpfrallfa smglfgivpg thaaianwsn prrsialaye fatslfyitg vvfyvsrvpe
      301 rfkpgwfdla chshqifhvm vvmgalahyg aslvfldwrn hesc
//
LOCUS       XP_016733018             346 aa            linear   PLN 06-AUG-2024
DEFINITION  heptahelical transmembrane protein 1 [Gossypium hirsutum].
ACCESSION   XP_016733018
VERSION     XP_016733018.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877529.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016733018.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..346
                     /product="heptahelical transmembrane protein 1"
                     /calculated_mol_wt=39111
     Region          68..331
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..346
                     /gene="LOC107943738"
                     /coded_by="XM_016877529.2:231..1271"
                     /db_xref="GeneID:107943738"
ORIGIN      
        1 mdptldsklv sepveaekck krvqspppsp syglvsfkel peymkdnefi lnyyranwpl
       61 kealfsifrw hnetlnvwth llgfvlflgl tmanlievpq vsdliaflts sfpisgdcnv
      121 sqdpllgttt nlvdlkqima sepdvspvtr wpfyvflags mfcllsssic hlfschshhl
      181 nlsllrldya gittmiitsf fppiyyifqc dpqwhfiylg gitvlglfti vtllspalst
      241 nkfraframl fssmglfgii pgahamivnw snprrnitla yesamaifyl tgtlfyvsrv
      301 perfkpgwfd ltghshqifh vlvvmgalah ygaslvfldw rdhhsc
//
LOCUS       XP_040941616            1053 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sucrose-phosphate synthase 1 [Gossypium hirsutum].
ACCESSION   XP_040941616
VERSION     XP_040941616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085682.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1053
                     /product="probable sucrose-phosphate synthase 1"
                     /calculated_mol_wt=118283
     Region          1..1050
                     /region_name="sucrsPsyn_pln"
                     /note="sucrose phosphate synthase/possible sucrose
                     phosphate phosphatase, plant; TIGR02468"
                     /db_xref="CDD:274147"
     CDS             1..1053
                     /gene="LOC121212592"
                     /coded_by="XM_041085682.1:279..3440"
                     /db_xref="GeneID:121212592"
ORIGIN      
        1 magndwinsy leaildvgpn lddaksslll rergrfsptr yfveevitgf detdlhrswv
       61 kaqatrspqe rntrlenmcw riwnlarqkk qlesqlaqrk akrrlererg rreatadmse
      121 dlsegekgdi vsdvsahget nkgrlprins vdametwasq qkgkklyivl islhglirge
      181 nmelgrdsdt ggqvkyvvel aralgsmpgv yrvdlltrqv asldvdwsyg eptemltprn
      241 sedfmdeige ssgayivrip fgpkdkyipk ellwphipef vdgalshiiq mshvlgeqig
      301 sgkpvwpvai hghyadagds aallsgalnv pmlftghslg rdkleqllkq grlskdeint
      361 tykimrriea eelsldasei vitstrqeid eqwrlydgfd pvlerklrar irrnvscygr
      421 fmprmviipp gmefhhivpq dgdmdgeveg neehpsspdp piwseimrff snprkpmila
      481 larpdpkkni ttlvkafgec rplrelanlt limgnrdgid emsstnasvl lsvlklidky
      541 dlygqvaypk hhkqfevpdi yrlaaktkgv finpafiepf gltlieaaah glpivatkng
      601 gpvdihrvld ngllvdphdq qsiadallkl vadkhlwarc rqnglknihl fswpehckty
      661 lsriasckpr hpqwqrsddg gessetdsps dslrdihdis lnlkfsmdgd rsgasgndnt
      721 ldsegndrks klenavlsws kgvlkdqrka gsgdridhgs stgkfpalrr rkhifviavd
      781 sdsnedllda irkvfeavek eriegsigfi lstymtisei qsflvsggln andfdaficn
      841 sgsdlfysti npedgpfvid fyyhshieyr wggeglrktl vrwagsvtdr megneehivt
      901 vaehlstnyc ytfevknagr vppvkelrkl lriqalrcnv iycrngtrin vipvlasrsq
      961 alrylyvrwg idlskmvvfv gdsgdtdyeg llggvhksii lkgiccntsn qllanrnypl
     1021 sdvmpvdspn ilqtsqdcts tdvreslenl lks
//
LOCUS       XP_040941617             591 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin C-terminal hydrolase 22 [Gossypium hirsutum].
ACCESSION   XP_040941617
VERSION     XP_040941617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085683.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..591
                     /product="ubiquitin C-terminal hydrolase 22"
                     /calculated_mol_wt=66139
     Region          57..123
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          204..570
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(208,213,532,548)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..591
                     /gene="LOC121212593"
                     /coded_by="XM_041085683.1:332..2107"
                     /db_xref="GeneID:121212593"
ORIGIN      
        1 msskisgrvs pqpcphlldf csrngskpfr alqdcirvkp pggraairre pfevprcgtc
       61 dessrprlya cvacaavfch appihshasa halsvpghei avdvdraelf ccacrdqvyd
      121 rdfdaavvla qtitsttsts gstvtqckat gsqpdnlrkr rrvdyslwap nsrenaiien
      181 hsiplhdatn gslisstelp wglrglnnlg ntcfmnsvlq allhtpplrn yflsdrhnry
      241 ycqqkngatr ngsknsrfcl acdmdamfsa vfsgdrtpys pakflhswwq haanlasyeq
      301 qdaheffism ldgihekvak ekrkthspgt gdcciahrvf sgilrsdvmc macgftstty
      361 dpcldisldl epsqgvsgks slaksnnscn veadctgssq ncgistlkgc lerftraekl
      421 gsdqkffcqk cqvrqeslkq msirklplvs cfhikrfehs sirrmsrkvd rylqfpfsld
      481 mapylsssil rsrfgnrifp fdgdeqdacn evssefelfa vvthtgklda ghyvtylrls
      541 nhwykcddaw itrvnesivl aaqgymmfyv qkmlyyrase kqaaswcdvr k
//
LOCUS       XP_040941618             476 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional purple acid phosphatase 26 [Gossypium hirsutum].
ACCESSION   XP_040941618
VERSION     XP_040941618.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085684.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..476
                     /product="bifunctional purple acid phosphatase 26"
                     /calculated_mol_wt=55026
     Region          56..448
                     /region_name="PLN02533"
                     /note="probable purple acid phosphatase"
                     /db_xref="CDD:215292"
     CDS             1..476
                     /gene="LOC121212594"
                     /coded_by="XM_041085684.1:175..1605"
                     /db_xref="GeneID:121212594"
ORIGIN      
        1 mksllfqlil vpfvilnfvn nvnagitsrf vreewpsvdi pldhevfavp kgdnapqqvh
       61 itqgnydgna viiswvtfde pgsskvqygk sdknyefsae gkmtnytfyk ynsgyihhvl
      121 vdgleydtky yykigdgdsa refwfqtppm igpdvpykfg iigdlgqtyn slstlehyme
      181 sgaqsvlfvg dlsyadryky ndvgirwdsw grfvekstay qpwiwsagnh eiedmpymne
      241 vtpfksylhr yptpylasks sspmwyairr asahiivlss yspfvkytpq ckwleeelnr
      301 vdrkktpwli vlvhvpiyns neahfmeges mravfeewfi hhkvdvifsg hvhayersyr
      361 isnirynvss gerfpvpdes apvyitvgdg gnqeglagkf rdpqpdysaf reasyghstl
      421 eimnrthahy hwnrnddgkk vaidsfvlnn qywssnvrer klkrhylngm rmiass
//
LOCUS       XP_040941619             434 aa            linear   PLN 06-AUG-2024
DEFINITION  monogalactosyldiacylglycerol synthase 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040941619
VERSION     XP_040941619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085685.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..434
                     /product="monogalactosyldiacylglycerol synthase 2,
                     chloroplastic"
                     /calculated_mol_wt=48482
     Region          72..434
                     /region_name="PLN02605"
                     /note="monogalactosyldiacylglycerol synthase"
                     /db_xref="CDD:215325"
     CDS             1..434
                     /gene="LOC121212595"
                     /coded_by="XM_041085685.1:134..1438"
                     /db_xref="GeneID:121212595"
ORIGIN      
        1 matnlvspkk vasitervwq svyrnsssss sggggnhqrr csyesdddey edydgvgtvq
       61 lmqmgaertk nvlilmsdtg gghrasaeai rdtfsiefgd eyriivkdvw keytgwplnd
      121 mersykfmvk hvqlwkvafh ntsprwihsc ylaaiaayya keveaglmky kpdiiicvhp
      181 lmqhiplwvl kwqglqkkvv fvtiitdlss chptwfhpgv nrcycpsnev akralydgle
      241 esqvrvfglp irpsfaravl skddlrkele mdpdlpavll mgggegmgpv ketakalges
      301 lydkdqekpi gqliiicgrn kgltstlesk ewkipvkvrg fetqmekwmg acdciitkag
      361 pgtiaealir glpivlndyi pgqekgnvpy vvdngagvft rsssetariv aewfstktde
      421 lkrmsenalk laqp
//
LOCUS       XP_040941620             221 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941620
VERSION     XP_040941620.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085686.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..221
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=24421
     Region          157..214
                     /region_name="RING-H2"
                     /note="H2 subclass of RING (RING-H2) fingers and its
                     variants; cd16448"
                     /db_xref="CDD:438112"
     CDS             1..221
                     /gene="LOC121212596"
                     /coded_by="XM_041085686.1:257..922"
                     /db_xref="GeneID:121212596"
ORIGIN      
        1 mgkkkkssql hrnldlpsps enmpcssgta llskehssnl dagidvgsss mkllnsnssv
       61 ahhhynlgrs iflkrsrhyy ghhysrrnsg slsnpttsrg lisplhderl sfkfaqykpe
      121 sgrgadgrek afgrperirs tslvmdavlp dqvnsvcglc qkhlrrkpyi lgntlasgef
      181 svvavlvcgh vyhedclekr tsfeerrdpr cplcssspsq i
//
LOCUS       XP_040941621             219 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941621
VERSION     XP_040941621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085687.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=24293
     Region          155..212
                     /region_name="RING-H2"
                     /note="H2 subclass of RING (RING-H2) fingers and its
                     variants; cd16448"
                     /db_xref="CDD:438112"
     CDS             1..219
                     /gene="LOC121212596"
                     /coded_by="XM_041085687.1:251..910"
                     /db_xref="GeneID:121212596"
ORIGIN      
        1 mgkkkkssql hrnldlpsps enmpcssgta llskehssnl dagidvgsss mkllnsnssv
       61 ahhhynlgrs iflkrsrhyy ghhysrrnsg slsnpttsrg lisplhderl sfkfaqykpe
      121 sgrdgrekaf grperirsts lvmdavlpdq vnsvcglcqk hlrrkpyilg ntlasgefsv
      181 vavlvcghvy hedclekrts feerrdprcp lcssspsqi
//
LOCUS       XP_040941622             767 aa            linear   PLN 06-AUG-2024
DEFINITION  pyrophosphate-energized vacuolar membrane proton pump [Gossypium
            hirsutum].
ACCESSION   XP_040941622
VERSION     XP_040941622.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085688.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..767
                     /product="pyrophosphate-energized vacuolar membrane proton
                     pump"
                     /calculated_mol_wt=80114
     Region          3..767
                     /region_name="PLN02255"
                     /note="H(+) -translocating inorganic pyrophosphatase"
                     /db_xref="CDD:215143"
     CDS             1..767
                     /gene="LOC121212597"
                     /coded_by="XM_041085688.1:215..2518"
                     /db_xref="GeneID:121212597"
ORIGIN      
        1 mgasilsdfg aeilipvcav igiafslvqw vlvskvklsp grdsvnngsg akngysdyli
       61 eeeeglndhs vvlkcaeiqs aisegatsfl fteyqyvgif mvafailifl flgsverfss
      121 ksqpctygks kickpalata afstisfllg aitsvvsgfl gmkiatyana rttlearkgv
      181 gkafitafrs gavmgfllaa ngllvlyiai nlfklyygdd wsglfeaitg yglggssmal
      241 fgrvgggiyt kaadvgadlv gkverniped dprnpaviad nvgdnvgdia gmgsdlfgsy
      301 aesscaalvv asissfginh eltpmlypli issvgiivcl ittlfatdff eikavkeiep
      361 slkrqliist vlmtigigiv swialpssft ifnfgdqkav knwqlflcva vglwagliig
      421 fvteyytsna yspvqdvads crtgaatnvi fglalgyksc iipifaiais ifvsfsfaam
      481 ygiavsalgm lstiatglai daygpisdna ggiaemagms hrirertdal daagnttaai
      541 gkgfaigsaa lvslalfgaf vsraaistvd vltpkvfigl lvgamlpywf samtmksvgs
      601 aalkmveevr rqfntipglm egttkpdyat cvkistdasi kemippgalv mltplvvgif
      661 fgveslsgvl agslvsgvqi aisasntgga wdnakkyiea gasphakslg pkgsdphkaa
      721 vigdtigdpl kdtsgpslni liklmavesl vfapffathg gllfklf
//
LOCUS       XP_040941623             683 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHOX1 [Gossypium hirsutum].
ACCESSION   XP_040941623
VERSION     XP_040941623.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085689.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..683
                     /product="protein PHOX1"
                     /calculated_mol_wt=78674
     Region          37..65
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(38,41..42,45..46,48,72,79..80,83..84,86..87,112,
                     115..116,119..120,123)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          44..>148
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          70..106
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          111..138
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          241..314
                     /region_name="PB1"
                     /note="PB1 domain; smart00666"
                     /db_xref="CDD:214770"
     Site            order(242,248..250,266,313)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(242,249..251,266,270,313)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(242,270)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(283,296)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(283,296)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(283,296)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(283,296)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..683
                     /gene="LOC121212598"
                     /coded_by="XM_041085689.1:712..2763"
                     /db_xref="GeneID:121212598"
ORIGIN      
        1 mgkhsvknkk qtgkavhsnv tnpkqndsdl avfvsmsrel keegnklfqr rdhegamvky
       61 eealellpkn hmdvchlrsn maacymqmgs seyprairec nlalevtpny skallkrarc
      121 yealnrlela frdvntvlnm epnnvmalei servqstlek rglqvndtvi elppeyvehp
      181 saskvvkekt kkknkkidka rvdqiqekkv denmnekkae dkrvvqemis skmeeeskkn
      241 vkliygedir caqlplncsl vqlreiihdr fpssravlvk yrdeecdlvt itsdeelrla
      301 eisavsqgsr rlyvvevnsd qdpfferfkr eevhnlengd agkvtearqd scciddwiie
      361 faqlfknhvg fdsdaylnlh elgmkpysea medtvtsaea qdhfgsaaek fremtalalf
      421 nwgnvhmsrv rkrvyftndg skesvlkqik ttydwaqley tkagksyeea lrikpdfyea
      481 llalsqqqfe qaklswyyai snnvnpetwp skkvlqlynn aeeniekgml mweelqvqrl
      541 relskpneeq nqimgldglf kdisadevae qaltmsaqin llwgtilyer simefklglp
      601 lwqeclevav ekfehagasp mdiavmvknh csnnnapegl gftideiiqa wnktyeakkw
      661 qsripsfrle pllqrrvskn yha
//
LOCUS       XP_040941624             609 aa            linear   PLN 06-AUG-2024
DEFINITION  protein S-acyltransferase 24 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941624
VERSION     XP_040941624.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085690.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..609
                     /product="protein S-acyltransferase 24 isoform X1"
                     /calculated_mol_wt=66791
     Region          <51..276
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          78..108
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(110,112,116..117,120..122,124..125,129,132,175,177,
                     179,183..184,187..189,191..192,196,199,208,210,212,
                     216..217,220..222,224..225,229,232)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          110..175
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          177..208
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          383..510
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..609
                     /gene="LOC121212599"
                     /coded_by="XM_041085690.1:255..2084"
                     /db_xref="GeneID:121212599"
ORIGIN      
        1 msskikvvek vqplkqlggv vtngngngeg ynavvgdyay yaslrndvyc aaaygdlgrl
       61 rmlveylgfs lkepdalgyy alqwaalnnr tdtaqyiieh ggdvnakdqs gqtalhwsav
      121 rgsiqvaevl lqggawvdaa dvngyrithv atqygqtafl yyvvskwnan pdvpdnegrs
      181 plhwaaykgf mdcirlllyl danrgcqdre gctplhwaai kgnleactll lqgsqeglav
      241 tdnsgltpaq lasekkhrki afllgntrrl heyrsngnsl lgklpklgla pvlccvivvh
      301 lmtyihsvim asnlpkltag fgilawlgvf lssagliwfy rcsskdpgyi kmnvsdhqnl
      361 kedepllkie anhpallagn wsqlcttcki ikplrakhcs tcdrcveqfd hhcpcvsncv
      421 gkknkwdffl fivlevmamv itggvamtri lmdpmapvgf spmfshasth higaltflim
      481 difyffgasa lvvsqatqis rnitsneman imrysylrga dgqlrnpydh gcwkncsgfv
      541 ingynedvpi aedsanseet gmiqiprdsn lqnsnshapt dinghiavhv nssntnghhg
      601 pvhsslqpr
//
LOCUS       XP_040941625             562 aa            linear   PLN 06-AUG-2024
DEFINITION  protein S-acyltransferase 24 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941625
VERSION     XP_040941625.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085691.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..562
                     /product="protein S-acyltransferase 24 isoform X2"
                     /calculated_mol_wt=61903
     Region          <51..217
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          78..128
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(79,83..84,87..89,91..92,96,99,128,130,132,136..137,
                     140..142,144..145,149,152,161,163,165,169..170,173..175,
                     177..178,182,185)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          130..161
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          336..463
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..562
                     /gene="LOC121212599"
                     /coded_by="XM_041085691.1:247..1935"
                     /db_xref="GeneID:121212599"
ORIGIN      
        1 msskikvvek vqplkqlggv vtngngngeg ynavvgdyay yaslrndvyc aaaygdlgrl
       61 rmlveylgfs lkepdalgyy alqwaalnnr tdtaqyiiei thvatqygqt aflyyvvskw
      121 nanpdvpdne grsplhwaay kgfmdcirll lyldanrgcq dregctplhw aaikgnleac
      181 tlllqgsqeg lavtdnsglt paqlasekkh rkiafllgnt rrlheyrsng nsllgklpkl
      241 glapvlccvi vvhlmtyihs vimasnlpkl tagfgilawl gvflssagli wfyrcsskdp
      301 gyikmnvsdh qnlkedepll kieanhpall agnwsqlctt ckiikplrak hcstcdrcve
      361 qfdhhcpcvs ncvgkknkwd fflfivlevm amvitggvam trilmdpmap vgfspmfsha
      421 sthhigaltf limdifyffg asalvvsqat qisrnitsne manimrysyl rgadgqlrnp
      481 ydhgcwkncs gfvingyned vpiaedsans eetgmiqipr dsnlqnsnsh aptdinghia
      541 vhvnssntng hhgpvhsslq pr
//
LOCUS       XP_040941626             330 aa            linear   PLN 06-AUG-2024
DEFINITION  protein OS-9 homolog [Gossypium hirsutum].
ACCESSION   XP_040941626
VERSION     XP_040941626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085692.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..330
                     /product="protein OS-9 homolog"
                     /calculated_mol_wt=38062
     Region          158..238
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein;
                     pfam07915"
                     /db_xref="CDD:400321"
     CDS             1..330
                     /gene="LOC121203124"
                     /coded_by="XM_041085692.1:126..1118"
                     /db_xref="GeneID:121203124"
ORIGIN      
        1 mfffviieyf ylhlregkke rmivelnfef giesnispkg gkmrlfitlv aavlcilcin
       61 vfadpvfpsh iagtfghssr epkykiefht edspyhpddg qesvvmpnkd gkkflcflpk
      121 vgkakkpvth qntssmivet ekrvklktpd ellevlknqc fvrqegwwsy efcyqkqlrq
      181 lhleedkvvq efvlgvydee ataavnqnls distlkdprs kdasqryhah qytngtacdl
      241 tnqpretevr fvcseprami ssitelstck yaltiqcpml ckhplfqeer pvwhtincni
      301 lpkdykdtkv ddthftmmmd sddpstystk
//
LOCUS       XP_016732173             858 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016732173
VERSION     XP_016732173.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876684.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732173.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..858
                     /product="receptor like protein 21 isoform X1"
                     /calculated_mol_wt=95688
     Region          19..>266
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          91..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          210..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>774
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          309..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          335..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..424
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          430..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          453..476
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          477..501
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          502..524
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          525..547
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          548..569
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          572..595
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          596..660
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          661..687
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..711
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..858
                     /gene="LOC107942947"
                     /coded_by="XM_016876684.2:564..3140"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mscnilygvc idnkrelklm slkelnlwgn ifnsnilssl gslsnlksls lthifdgdam
       61 eesiglpamk nleklhlech nengwqnltn lkeltltdls ctsniiqdig tltsledlvi
      121 dgcdvddnlt lhgfcelrkl qtlaiinsyw naslpecfse ltslkyldis ynnfsgnism
      181 fknlrllkyl dissnnffgd ismlknlkll eyldlrsnkf sgdisyfmsl tslrelwlsn
      241 nnieipssla plfnlsklqk lyadnnttyn aetemhsvdt ptfqlrsisl sccgdggsfp
      301 qslnhqhdlr dvdlsninfk gdqfpnwlle nnkkletlnl vnsslsghfh lpstsrrgls
      361 rldvssnsld gnipneigak lpsllvlnms nnffgggipi sigdmislkl ldfsnhrlsg
      421 giprhlpmgl fifdvsnnql fgdipssmes msllaldlsn ntlfggiprw mgtmsylevl
      481 lmannhfegp ipvefcelny slkfldlsan nlsgslpscf nslslthvyl srnklegpit
      541 sffnssglvt ldlsnnhlig nipnwigsls tlsyllinnn yfeggipvql celhllrlid
      601 vssnnlsgti ppclmntisn dssrayfdns gydgsigsfy vdvpikftmk cisyfykatv
      661 ltylsgidls cnkltgeiph qfqhyrdiiv lnfshnslig pipptladls qiesldlshn
      721 hlsgnipsql lglhflsffs vaynnlsgit pqmtgqfatf eessylgnlf lcgeplpknc
      781 sidgssssmp knatdkgfid meffyasfvg syivmplcia mvlyinpywr qawfyhveaa
      841 tmscyyfvld hilpkrfh
//
LOCUS       XP_040941627             839 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941627
VERSION     XP_040941627.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085693.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..839
                     /product="receptor like protein 21 isoform X2"
                     /calculated_mol_wt=93493
     Region          1..>247
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          72..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          214..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..>755
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          290..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          365..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          434..457
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          458..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..505
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          529..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          553..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          577..641
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          642..668
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          669..692
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          693..716
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..839
                     /gene="LOC107942947"
                     /coded_by="XM_041085693.1:789..3308"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mslkelnlwg nifnsnilss lgslsnlksl slthifdgda meesiglpam knleklhlec
       61 hnengwqnlt nlkeltltdl sctsniiqdi gtltsledlv idgcdvddnl tlhgfcelrk
      121 lqtlaiinsy wnaslpecfs eltslkyldi synnfsgnis mfknlrllky ldissnnffg
      181 dismlknlkl leyldlrsnk fsgdisyfms ltslrelwls nnnieipssl aplfnlsklq
      241 klyadnntty naetemhsvd tptfqlrsis lsccgdggsf pqslnhqhdl rdvdlsninf
      301 kgdqfpnwll ennkkletln lvnsslsghf hlpstsrrgl srldvssnsl dgnipneiga
      361 klpsllvlnm snnffgggip isigdmislk lldfsnhrls ggiprhlpmg lfifdvsnnq
      421 lfgdipssme smsllaldls nntlfggipr wmgtmsylev llmannhfeg pipvefceln
      481 yslkfldlsa nnlsgslpsc fnslslthvy lsrnklegpi tsffnssglv tldlsnnhli
      541 gnipnwigsl stlsyllinn nyfeggipvq lcelhllrli dvssnnlsgt ippclmntis
      601 ndssrayfdn sgydgsigsf yvdvpikftm kcisyfykat vltylsgidl scnkltgeip
      661 hqfqhyrdii vlnfshnsli gpipptladl sqiesldlsh nhlsgnipsq llglhflsff
      721 svaynnlsgi tpqmtgqfat feessylgnl flcgeplpkn csidgssssm pknatdkgfi
      781 dmeffyasfv gsyivmplci amvlyinpyw rqawfyhvea atmscyyfvl dhilpkrfh
//
LOCUS       XP_040941628             839 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941628
VERSION     XP_040941628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085694.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..839
                     /product="receptor like protein 21 isoform X2"
                     /calculated_mol_wt=93493
     Region          1..>247
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          72..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          214..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..>755
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          290..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          365..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          434..457
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          458..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..505
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          529..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          553..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          577..641
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          642..668
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          669..692
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          693..716
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..839
                     /gene="LOC107942947"
                     /coded_by="XM_041085694.1:779..3298"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mslkelnlwg nifnsnilss lgslsnlksl slthifdgda meesiglpam knleklhlec
       61 hnengwqnlt nlkeltltdl sctsniiqdi gtltsledlv idgcdvddnl tlhgfcelrk
      121 lqtlaiinsy wnaslpecfs eltslkyldi synnfsgnis mfknlrllky ldissnnffg
      181 dismlknlkl leyldlrsnk fsgdisyfms ltslrelwls nnnieipssl aplfnlsklq
      241 klyadnntty naetemhsvd tptfqlrsis lsccgdggsf pqslnhqhdl rdvdlsninf
      301 kgdqfpnwll ennkkletln lvnsslsghf hlpstsrrgl srldvssnsl dgnipneiga
      361 klpsllvlnm snnffgggip isigdmislk lldfsnhrls ggiprhlpmg lfifdvsnnq
      421 lfgdipssme smsllaldls nntlfggipr wmgtmsylev llmannhfeg pipvefceln
      481 yslkfldlsa nnlsgslpsc fnslslthvy lsrnklegpi tsffnssglv tldlsnnhli
      541 gnipnwigsl stlsyllinn nyfeggipvq lcelhllrli dvssnnlsgt ippclmntis
      601 ndssrayfdn sgydgsigsf yvdvpikftm kcisyfykat vltylsgidl scnkltgeip
      661 hqfqhyrdii vlnfshnsli gpipptladl sqiesldlsh nhlsgnipsq llglhflsff
      721 svaynnlsgi tpqmtgqfat feessylgnl flcgeplpkn csidgssssm pknatdkgfi
      781 dmeffyasfv gsyivmplci amvlyinpyw rqawfyhvea atmscyyfvl dhilpkrfh
//
LOCUS       XP_040941629             839 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941629
VERSION     XP_040941629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085695.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..839
                     /product="receptor like protein 21 isoform X2"
                     /calculated_mol_wt=93493
     Region          1..>247
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          72..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          214..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..>755
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          290..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          365..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          434..457
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          458..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..505
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          529..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          553..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          577..641
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          642..668
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          669..692
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          693..716
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..839
                     /gene="LOC107942947"
                     /coded_by="XM_041085695.1:591..3110"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mslkelnlwg nifnsnilss lgslsnlksl slthifdgda meesiglpam knleklhlec
       61 hnengwqnlt nlkeltltdl sctsniiqdi gtltsledlv idgcdvddnl tlhgfcelrk
      121 lqtlaiinsy wnaslpecfs eltslkyldi synnfsgnis mfknlrllky ldissnnffg
      181 dismlknlkl leyldlrsnk fsgdisyfms ltslrelwls nnnieipssl aplfnlsklq
      241 klyadnntty naetemhsvd tptfqlrsis lsccgdggsf pqslnhqhdl rdvdlsninf
      301 kgdqfpnwll ennkkletln lvnsslsghf hlpstsrrgl srldvssnsl dgnipneiga
      361 klpsllvlnm snnffgggip isigdmislk lldfsnhrls ggiprhlpmg lfifdvsnnq
      421 lfgdipssme smsllaldls nntlfggipr wmgtmsylev llmannhfeg pipvefceln
      481 yslkfldlsa nnlsgslpsc fnslslthvy lsrnklegpi tsffnssglv tldlsnnhli
      541 gnipnwigsl stlsyllinn nyfeggipvq lcelhllrli dvssnnlsgt ippclmntis
      601 ndssrayfdn sgydgsigsf yvdvpikftm kcisyfykat vltylsgidl scnkltgeip
      661 hqfqhyrdii vlnfshnsli gpipptladl sqiesldlsh nhlsgnipsq llglhflsff
      721 svaynnlsgi tpqmtgqfat feessylgnl flcgeplpkn csidgssssm pknatdkgfi
      781 dmeffyasfv gsyivmplci amvlyinpyw rqawfyhvea atmscyyfvl dhilpkrfh
//
LOCUS       XP_040941630             808 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941630
VERSION     XP_040941630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085696.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..808
                     /product="receptor like protein 21 isoform X3"
                     /calculated_mol_wt=90265
     Region          3..>216
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          16..40
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          41..64
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          65..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          160..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..207
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..>724
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          259..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          334..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          380..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          403..426
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          427..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..474
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          475..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          498..519
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          522..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..610
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          638..661
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          662..685
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..808
                     /gene="LOC107942947"
                     /coded_by="XM_041085696.1:1015..3441"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mvlnlqlqsl difpslktls legvrmnrti iiqrwqnltn lkeltltdls ctsniiqdig
       61 tltsledlvi dgcdvddnlt lhgfcelrkl qtlaiinsyw naslpecfse ltslkyldis
      121 ynnfsgnism fknlrllkyl dissnnffgd ismlknlkll eyldlrsnkf sgdisyfmsl
      181 tslrelwlsn nnieipssla plfnlsklqk lyadnnttyn aetemhsvdt ptfqlrsisl
      241 sccgdggsfp qslnhqhdlr dvdlsninfk gdqfpnwlle nnkkletlnl vnsslsghfh
      301 lpstsrrgls rldvssnsld gnipneigak lpsllvlnms nnffgggipi sigdmislkl
      361 ldfsnhrlsg giprhlpmgl fifdvsnnql fgdipssmes msllaldlsn ntlfggiprw
      421 mgtmsylevl lmannhfegp ipvefcelny slkfldlsan nlsgslpscf nslslthvyl
      481 srnklegpit sffnssglvt ldlsnnhlig nipnwigsls tlsyllinnn yfeggipvql
      541 celhllrlid vssnnlsgti ppclmntisn dssrayfdns gydgsigsfy vdvpikftmk
      601 cisyfykatv ltylsgidls cnkltgeiph qfqhyrdiiv lnfshnslig pipptladls
      661 qiesldlshn hlsgnipsql lglhflsffs vaynnlsgit pqmtgqfatf eessylgnlf
      721 lcgeplpknc sidgssssmp knatdkgfid meffyasfvg syivmplcia mvlyinpywr
      781 qawfyhveaa tmscyyfvld hilpkrfh
//
LOCUS       XP_040941631             731 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941631
VERSION     XP_040941631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085697.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..731
                     /product="receptor like protein 21 isoform X4"
                     /calculated_mol_wt=81587
     Region          31..268
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Site            order(37,40,42,45,47,60,63,65,68,70,83,86,88,91,93,106,
                     109,111,114,116,131,134,136,139,141,156,159,161,164,166,
                     182,185,187,190,208,211,213,216,218,232,235,237,240,242,
                     257,260,262,265,267)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Region          37..59
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            order(43..44,90,138,163,215,236,238,261)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          60..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          83..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..>647
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          208..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          398..420
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          421..442
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          445..468
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          469..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          561..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..731
                     /gene="LOC107942947"
                     /coded_by="XM_041085697.1:1436..3631"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mvvtlmiisp ymlqtlaiin sywnaslpec fseltslkyl disynnfsgn ismfknlrll
       61 kyldissnnf fgdismlknl klleyldlrs nkfsgdisyf msltslrelw lsnnnieips
      121 slaplfnlsk lqklyadnnt tynaetemhs vdtptfqlrs islsccgdgg sfpqslnhqh
      181 dlrdvdlsni nfkgdqfpnw llennkklet lnlvnsslsg hfhlpstsrr glsrldvssn
      241 sldgnipnei gaklpsllvl nmsnnffggg ipisigdmis lklldfsnhr lsggiprhlp
      301 mglfifdvsn nqlfgdipss mesmsllald lsnntlfggi prwmgtmsyl evllmannhf
      361 egpipvefce lnyslkfldl sannlsgslp scfnslslth vylsrnkleg pitsffnssg
      421 lvtldlsnnh lignipnwig slstlsylli nnnyfeggip vqlcelhllr lidvssnnls
      481 gtippclmnt isndssrayf dnsgydgsig sfyvdvpikf tmkcisyfyk atvltylsgi
      541 dlscnkltge iphqfqhyrd iivlnfshns ligpipptla dlsqiesldl shnhlsgnip
      601 sqllglhfls ffsvaynnls gitpqmtgqf atfeessylg nlflcgeplp kncsidgsss
      661 smpknatdkg fidmeffyas fvgsyivmpl ciamvlyinp ywrqawfyhv eaatmscyyf
      721 vldhilpkrf h
//
LOCUS       XP_040941632             731 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941632
VERSION     XP_040941632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085698.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..731
                     /product="receptor like protein 21 isoform X4"
                     /calculated_mol_wt=81587
     Region          31..268
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Site            order(37,40,42,45,47,60,63,65,68,70,83,86,88,91,93,106,
                     109,111,114,116,131,134,136,139,141,156,159,161,164,166,
                     182,185,187,190,208,211,213,216,218,232,235,237,240,242,
                     257,260,262,265,267)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Region          37..59
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            order(43..44,90,138,163,215,236,238,261)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          60..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          83..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..>647
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          208..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          398..420
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          421..442
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          445..468
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          469..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          561..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..731
                     /gene="LOC107942947"
                     /coded_by="XM_041085698.1:871..3066"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mvvtlmiisp ymlqtlaiin sywnaslpec fseltslkyl disynnfsgn ismfknlrll
       61 kyldissnnf fgdismlknl klleyldlrs nkfsgdisyf msltslrelw lsnnnieips
      121 slaplfnlsk lqklyadnnt tynaetemhs vdtptfqlrs islsccgdgg sfpqslnhqh
      181 dlrdvdlsni nfkgdqfpnw llennkklet lnlvnsslsg hfhlpstsrr glsrldvssn
      241 sldgnipnei gaklpsllvl nmsnnffggg ipisigdmis lklldfsnhr lsggiprhlp
      301 mglfifdvsn nqlfgdipss mesmsllald lsnntlfggi prwmgtmsyl evllmannhf
      361 egpipvefce lnyslkfldl sannlsgslp scfnslslth vylsrnkleg pitsffnssg
      421 lvtldlsnnh lignipnwig slstlsylli nnnyfeggip vqlcelhllr lidvssnnls
      481 gtippclmnt isndssrayf dnsgydgsig sfyvdvpikf tmkcisyfyk atvltylsgi
      541 dlscnkltge iphqfqhyrd iivlnfshns ligpipptla dlsqiesldl shnhlsgnip
      601 sqllglhfls ffsvaynnls gitpqmtgqf atfeessylg nlflcgeplp kncsidgsss
      661 smpknatdkg fidmeffyas fvgsyivmpl ciamvlyinp ywrqawfyhv eaatmscyyf
      721 vldhilpkrf h
//
LOCUS       XP_040941633             731 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941633
VERSION     XP_040941633.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085699.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..731
                     /product="receptor like protein 21 isoform X4"
                     /calculated_mol_wt=81587
     Region          31..268
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Site            order(37,40,42,45,47,60,63,65,68,70,83,86,88,91,93,106,
                     109,111,114,116,131,134,136,139,141,156,159,161,164,166,
                     182,185,187,190,208,211,213,216,218,232,235,237,240,242,
                     257,260,262,265,267)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Region          37..59
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            order(43..44,90,138,163,215,236,238,261)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          60..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          83..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..>647
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          208..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          398..420
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          421..442
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          445..468
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          469..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          561..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..731
                     /gene="LOC107942947"
                     /coded_by="XM_041085699.1:169..2364"
                     /db_xref="GeneID:107942947"
ORIGIN      
        1 mvvtlmiisp ymlqtlaiin sywnaslpec fseltslkyl disynnfsgn ismfknlrll
       61 kyldissnnf fgdismlknl klleyldlrs nkfsgdisyf msltslrelw lsnnnieips
      121 slaplfnlsk lqklyadnnt tynaetemhs vdtptfqlrs islsccgdgg sfpqslnhqh
      181 dlrdvdlsni nfkgdqfpnw llennkklet lnlvnsslsg hfhlpstsrr glsrldvssn
      241 sldgnipnei gaklpsllvl nmsnnffggg ipisigdmis lklldfsnhr lsggiprhlp
      301 mglfifdvsn nqlfgdipss mesmsllald lsnntlfggi prwmgtmsyl evllmannhf
      361 egpipvefce lnyslkfldl sannlsgslp scfnslslth vylsrnkleg pitsffnssg
      421 lvtldlsnnh lignipnwig slstlsylli nnnyfeggip vqlcelhllr lidvssnnls
      481 gtippclmnt isndssrayf dnsgydgsig sfyvdvpikf tmkcisyfyk atvltylsgi
      541 dlscnkltge iphqfqhyrd iivlnfshns ligpipptla dlsqiesldl shnhlsgnip
      601 sqllglhfls ffsvaynnls gitpqmtgqf atfeessylg nlflcgeplp kncsidgsss
      661 smpknatdkg fidmeffyas fvgsyivmpl ciamvlyinp ywrqawfyhv eaatmscyyf
      721 vldhilpkrf h
//
LOCUS       XP_016732574             831 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016732574
VERSION     XP_016732574.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877085.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732574.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..831
                     /product="receptor like protein 21 isoform X1"
                     /calculated_mol_wt=92756
     Region          7..213
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          38..62
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          63..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          87..111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          120..>747
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          136..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          230..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          356..379
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          380..425
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          426..449
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          450..474
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          475..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          498..520
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          521..544
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          545..568
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          594..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..660
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          661..684
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          685..706
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..831
                     /gene="LOC107943340"
                     /coded_by="XM_016877085.2:177..2672"
                     /db_xref="GeneID:107943340"
ORIGIN      
        1 megsiglpal knlekldlgc gyenvnlqlq sldifpslkt lslenfslkg tiiiqrwqnl
       61 tnlkeltlrv lsctsnviqd igtltsledl vidgcdvddn lnlhgfcelr klqtlaiins
      121 ywntslpecf seltslkyld isynnfsgni smfknltlle yldissnsff gdiymlknlk
      181 sleyldlssn kfsgdishfm nltslrglwl snnnieipss laplfnlskl qklyadnnmi
      241 ynaetemhsi dtptfqlrsi slsccgdggs fpqslnhqhd lrdvdlsnin fngdqfpnwl
      301 lennkkleal ylvnsslsgh fhlpstsrrg lsrldvssns ldgnipneig aklpsllvln
      361 msnnffgggi pisigdmisl qildfsnnkl sggisrhlpm gllifdvsnn qlfgdipssm
      421 enmslmltld lsnntlfggi prwmgkmsnl helvmannhf egpipmelck lnytlkfldl
      481 sanniseslp scfsfsrlth vylsrnklkg aitsffnsny lvtldlsnnh ltgnipnwig
      541 tlstlvylll dnnhfeggip vqlcklnrlr lidvsnnnls gtippclmnt isnvtsrany
      601 ddsgydgsig yfsvdvpikf tmksisyfyk atvltylsgi dlscnkltge iphqfqylrd
      661 iivlnfshns ligpippala dlsqiesldl shnnlsgnip srllglhfls ffsvaynnls
      721 gttprrtgqf atfeessyvg nhflcgeplp kncstngsss smsknttdkg fidmkvfyas
      781 fvgsyivmpl ciamvlyinp hwrqawfyhv eaatmscyyf vldhilpkrf r
//
LOCUS       XP_016732576             751 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016732576
VERSION     XP_016732576.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732576.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..751
                     /product="receptor like protein 21 isoform X2"
                     /calculated_mol_wt=83806
     Region          40..>667
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          56..101
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          102..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          251..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..345
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          395..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          418..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..553
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          554..580
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          581..604
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          605..626
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..751
                     /gene="LOC107943340"
                     /coded_by="XM_016877087.2:177..2432"
                     /db_xref="GeneID:107943340"
ORIGIN      
        1 megsiglpal knlekldlgc gyengfcelr klqtlaiins ywntslpecf seltslkyld
       61 isynnfsgni smfknltlle yldissnsff gdiymlknlk sleyldlssn kfsgdishfm
      121 nltslrglwl snnnieipss laplfnlskl qklyadnnmi ynaetemhsi dtptfqlrsi
      181 slsccgdggs fpqslnhqhd lrdvdlsnin fngdqfpnwl lennkkleal ylvnsslsgh
      241 fhlpstsrrg lsrldvssns ldgnipneig aklpsllvln msnnffgggi pisigdmisl
      301 qildfsnnkl sggisrhlpm gllifdvsnn qlfgdipssm enmslmltld lsnntlfggi
      361 prwmgkmsnl helvmannhf egpipmelck lnytlkfldl sanniseslp scfsfsrlth
      421 vylsrnklkg aitsffnsny lvtldlsnnh ltgnipnwig tlstlvylll dnnhfeggip
      481 vqlcklnrlr lidvsnnnls gtippclmnt isnvtsrany ddsgydgsig yfsvdvpikf
      541 tmksisyfyk atvltylsgi dlscnkltge iphqfqylrd iivlnfshns ligpippala
      601 dlsqiesldl shnnlsgnip srllglhfls ffsvaynnls gttprrtgqf atfeessyvg
      661 nhflcgeplp kncstngsss smsknttdkg fidmkvfyas fvgsyivmpl ciamvlyinp
      721 hwrqawfyhv eaatmscyyf vldhilpkrf r
//
LOCUS       XP_040941635             177 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9a [Gossypium hirsutum].
ACCESSION   XP_040941635
VERSION     XP_040941635.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085701.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..177
                     /product="receptor-like protein 9a"
                     /calculated_mol_wt=20079
     Region          48..>165
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          102..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          126..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..177
                     /gene="LOC121202857"
                     /coded_by="XM_041085701.1:130..663"
                     /db_xref="GeneID:121202857"
ORIGIN      
        1 meywklvwvf vvaflfggyq segcweieka alfqlkpffp lvngegiswg kgnccrwdwv
       61 ecstssgrvt rlflenscdl ekkdinlgwy lnislflpfe elkslnlggn nivgfihnqg
      121 ikrlkleild lsdnilsgnn ilshftefts lktlflkncg lqgsidilkk tievdqt
//
LOCUS       XP_040941636            1156 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941636
VERSION     XP_040941636.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085702.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1156
                     /product="receptor-like protein 13 isoform X1"
                     /calculated_mol_wt=130734
     Region          103..>555
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          103..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <383..669
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          391..411
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..460
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          461..483
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          484..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          507..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          530..554
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          555..605
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          595..>1072
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          606..631
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          656..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..704
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          705..721
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          727..750
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          751..774
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          775..799
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          800..822
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          823..845
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          846..867
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          870..891
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          894..961
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          962..985
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          986..1009
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1010..1033
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1156
                     /gene="LOC121212600"
                     /coded_by="XM_041085702.1:163..3633"
                     /db_xref="GeneID:121212600"
ORIGIN      
        1 meywklvwlf vlaflfggyq teacweieka alfqlkpffp hfddvgnswv egnccrwnwv
       61 ecststgrvt rlfleygydr ynkdiysarw yfnlslffpf kelkslnlrg ntiagfihnq
      121 gtkrssklnk lkildlsenk lleknilpyl aeftslkill lencglqgsv dilqlnnikn
      181 lkelylssnq ieslgslfqn keqltlakle vldlsynyfn nsifsslavl pylkslnies
      241 nhliewsyiq dlnvlsnlkr lnmtydglnd svlsqdnkke lklmnleeln lrgnvfnssi
      301 lsslgslsnl kslslfhifs megsidvrgl palkylekly vscqseyvva elqlqsldif
      361 pslktlslem fslkgtiiiq rwqnltnlke ltlrdlshts siiqnigtlt sledlvidgc
      421 didaslnlhg fcelrqlqtl tisntnwnas lpecfselts lkyldlssnn ffgnisifnn
      481 lisleyldls snnffenifv fknlisleyl dlssnkffgd isllksltsl qelrlsnnni
      541 eilsslaplf nlsklqniya dnnmiynaet emhsldtptf qlrsitlscc gdggsfphsl
      601 nhqhdlehvd lsninfkgyq fpnwllennk klkelhlans slsghfqlpp tsrrgllyld
      661 vsnnsldgni pneigaklps lkllnmsinf fggiipisig gmiflqfldl snnklsggip
      721 rhlpmglvlf dvsnnqlfgd ipssmenlsl mltldlsnnt lfggiprwmg kmsnlhelvm
      781 annhfegpip melcnlnysl qfldlsanni sgslpscfif srlthvylsr nklkgpitsf
      841 lnsnylvtld lsnnhltgni pnwigtlstl vyllldnnhf eggipvqlck lnrlrlidvs
      901 nnnlsgtipp clmnsisnds shayysdydy ngyigsfsad vpvevtmksi syfyrgrvlt
      961 ylsgidlscn kltgeiplqf qtfryiivln fshnsligpi ppalsylsri esldlshnhl
     1021 sgnipsqlvg lhflsffsva ynnlsgttpq rtgqfatfee ssyvgnpflc geplpkncst
     1081 dgssssmrrn atdegfldik vfyasfvgsy ivmplciaiv lyinpywrqa wfyhveaatm
     1141 scyyfvldnt lpkrfr
//
LOCUS       XP_040941637            1155 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941637
VERSION     XP_040941637.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085703.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1155
                     /product="receptor-like protein 13 isoform X2"
                     /calculated_mol_wt=130635
     Region          103..>554
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          103..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <382..668
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          390..410
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          436..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..505
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          529..553
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          554..604
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          594..>1071
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          605..630
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          655..679
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          680..703
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          704..720
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          726..749
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..773
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          774..798
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          799..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          822..844
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          845..866
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          869..890
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          893..960
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          961..984
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          985..1008
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1009..1032
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1155
                     /gene="LOC121212600"
                     /coded_by="XM_041085703.1:163..3630"
                     /db_xref="GeneID:121212600"
ORIGIN      
        1 meywklvwlf vlaflfggyq teacweieka alfqlkpffp hfddvgnswv egnccrwnwv
       61 ecststgrvt rlfleygydr ynkdiysarw yfnlslffpf kelkslnlrg ntiagfihnq
      121 gtkrssklnk lkildlsenk lleknilpyl aeftslkill lencglqgsv dilqlnnikn
      181 lkelylssnq ieslgslfqn keqltlakle vldlsynyfn nsifsslavl pylkslnies
      241 nhliewsyiq dlnvlsnlkr lnmtydglnd svlsqdnkke lklmnleeln lrgnvfnssi
      301 lsslgslsnl kslslfhifs megsidvrgl palkylekly vscqseyvae lqlqsldifp
      361 slktlslemf slkgtiiiqr wqnltnlkel tlrdlshtss iiqnigtlts ledlvidgcd
      421 idaslnlhgf celrqlqtlt isntnwnasl pecfseltsl kyldlssnnf fgnisifnnl
      481 isleyldlss nnffenifvf knlisleyld lssnkffgdi sllksltslq elrlsnnnie
      541 ilsslaplfn lsklqniyad nnmiynaete mhsldtptfq lrsitlsccg dggsfphsln
      601 hqhdlehvdl sninfkgyqf pnwllennkk lkelhlanss lsghfqlppt srrgllyldv
      661 snnsldgnip neigaklpsl kllnmsinff ggiipisigg miflqfldls nnklsggipr
      721 hlpmglvlfd vsnnqlfgdi pssmenlslm ltldlsnntl fggiprwmgk msnlhelvma
      781 nnhfegpipm elcnlnyslq fldlsannis gslpscfifs rlthvylsrn klkgpitsfl
      841 nsnylvtldl snnhltgnip nwigtlstlv yllldnnhfe ggipvqlckl nrlrlidvsn
      901 nnlsgtippc lmnsisndss hayysdydyn gyigsfsadv pvevtmksis yfyrgrvlty
      961 lsgidlscnk ltgeiplqfq tfryiivlnf shnsligpip palsylsrie sldlshnhls
     1021 gnipsqlvgl hflsffsvay nnlsgttpqr tgqfatfees syvgnpflcg eplpkncstd
     1081 gssssmrrna tdegfldikv fyasfvgsyi vmplciaivl yinpywrqaw fyhveaatms
     1141 cyyfvldntl pkrfr
//
LOCUS       XP_040941638             349 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 [Gossypium hirsutum].
ACCESSION   XP_040941638
VERSION     XP_040941638.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085704.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..349
                     /product="receptor-like protein 13"
                     /calculated_mol_wt=39443
     Region          28..63
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <92..346
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          102..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          126..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          176..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..349
                     /gene="LOC107942945"
                     /coded_by="XM_041085704.1:58..1107"
                     /db_xref="GeneID:107942945"
ORIGIN      
        1 meywklvwvf vlaflfggyq segcweieka allqlkpffp lindegiswg kgnccrwngv
       61 ecststgrvt rlfleyssvq vynnisqgwy lnislflpfh elksldlgkn yiagfidnqg
      121 sfmnkleild lshntllgnn ilfylvefts lktlllntcg lqgsidisel nslknlkelh
      181 lsgnqieslg slfqskrelr laklevldls fnyfnnsifs slaalphlks lnlesnlliq
      241 styiqdlnvl snlekltisy dimddtvpsq gnerelklmn leelnlwgnv fnssilsslg
      301 slsslkslfl shtyvmeesi dvrglpalkn leklhltgyi ekdtflgkl
//
LOCUS       XP_016726522             290 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-like-specific protease 2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016726522
VERSION     XP_016726522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871033.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..290
                     /product="probable ubiquitin-like-specific protease 2A
                     isoform X1"
                     /calculated_mol_wt=34302
     Region          <122..270
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..290
                     /gene="LOC107938011"
                     /coded_by="XM_016871033.2:150..1022"
                     /db_xref="GeneID:107938011"
ORIGIN      
        1 mgkkkqvdds iipidiapsd pdynrhpvsk hrscwihvvg ylrasrkkit kqeaqrlrsl
       61 kltapcfldn ipcrarskrr vtrkkstskl knkldsgsfe cyletlwsrl padkrdlftr
      121 ldcqwfawyr kasyrekvls wvkrkeifst kyvlvpivcw ghwsllifch fgeslqsktr
      181 tpcillldsl qmsdplrlea dirrfmfdiy kakgrpenkr miyqvpllvp kvpqqrngke
      241 cgnfvlyfin lfvksapenf nindypyfmk ndwfnaeave rfcerlhfgm
//
LOCUS       XP_016726523             272 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-like-specific protease 2A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016726523
VERSION     XP_016726523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871034.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..272
                     /product="probable ubiquitin-like-specific protease 2A
                     isoform X2"
                     /calculated_mol_wt=32087
     Region          <104..252
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..272
                     /gene="LOC107938011"
                     /coded_by="XM_016871034.2:147..965"
                     /db_xref="GeneID:107938011"
ORIGIN      
        1 mgkkkqvdds iipidiapsd pgylrasrkk itkqeaqrlr slkltapcfl dnipcrarsk
       61 rrvtrkksts klknkldsgs fecyletlws rlpadkrdlf trldcqwfaw yrkasyrekv
      121 lswvkrkeif stkyvlvpiv cwghwsllif chfgeslqsk trtpcillld slqmsdplrl
      181 eadirrfmfd iykakgrpen krmiyqvpll vpkvpqqrng kecgnfvlyf inlfvksape
      241 nfnindypyf mkndwfnaea verfcerlhf gm
//
LOCUS       XP_016726548             701 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-like domain-containing protein CIP73 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016726548
VERSION     XP_016726548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871059.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..701
                     /product="ubiquitin-like domain-containing protein CIP73
                     isoform X1"
                     /calculated_mol_wt=74716
     Region          22..92
                     /region_name="UBQ"
                     /note="Ubiquitin homologues; smart00213"
                     /db_xref="CDD:214563"
     CDS             1..701
                     /gene="LOC107938026"
                     /coded_by="XM_016871059.2:355..2460"
                     /db_xref="GeneID:107938026"
ORIGIN      
        1 mggtgddkip ihtetegset tieikiktla etytmrvdkq mpvpalkeqi asvtgvlseq
       61 qrlicrgkvl kddqllsayh vedghtlhmv vrqpvppsdg apnhsddlgs gtsrshgnhv
      121 psfvietsnm peqgdgvppe igrivsavlg mfgfanmasd vreqgsqrhe rtsgsgipes
      181 sqgqteqtsm rnqsdrehta fglpaavslg pmqppvipds latlsqylsh mkhefdgias
      241 rsgdrdsipa snsgtiredl ptpaslaevl qstrqmlidq ageclqllar qledqmnvtd
      301 tsarmiaqsn awrigvllhn lgslllelgr stmtlrlgqt pseavvnagp avfispsgpn
      361 rlmvqalpfq pgtslgtipm gtvqpgsglv nglgaalypr ridiqirrgs ttatpniirh
      421 ehndtttqqs dqrnpsvgsg nenhstqtts rvsdapsfag esgvrvvpir tmvaavpapl
      481 ghvpsdssgn tmgfyyplvg rfqhitpghl ngergsqpsg ehlstggqse qppvpesaaq
      541 hpsldestrd gslpnansrq qdrsnthsvn isdssvgrtq nnqdserqip snilqflraf
      601 fpsgefrvee sslqgtaags vpvqagtsrs gpaaepsitd eglflsnllh qimpyisqha
      661 gsqqstvptt ggntssqven srtrpsdsep nplnskrqkt e
//
LOCUS       XP_016726549             701 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-like domain-containing protein CIP73 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016726549
VERSION     XP_016726549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..701
                     /product="ubiquitin-like domain-containing protein CIP73
                     isoform X1"
                     /calculated_mol_wt=74716
     Region          22..92
                     /region_name="UBQ"
                     /note="Ubiquitin homologues; smart00213"
                     /db_xref="CDD:214563"
     CDS             1..701
                     /gene="LOC107938026"
                     /coded_by="XM_016871060.2:302..2407"
                     /db_xref="GeneID:107938026"
ORIGIN      
        1 mggtgddkip ihtetegset tieikiktla etytmrvdkq mpvpalkeqi asvtgvlseq
       61 qrlicrgkvl kddqllsayh vedghtlhmv vrqpvppsdg apnhsddlgs gtsrshgnhv
      121 psfvietsnm peqgdgvppe igrivsavlg mfgfanmasd vreqgsqrhe rtsgsgipes
      181 sqgqteqtsm rnqsdrehta fglpaavslg pmqppvipds latlsqylsh mkhefdgias
      241 rsgdrdsipa snsgtiredl ptpaslaevl qstrqmlidq ageclqllar qledqmnvtd
      301 tsarmiaqsn awrigvllhn lgslllelgr stmtlrlgqt pseavvnagp avfispsgpn
      361 rlmvqalpfq pgtslgtipm gtvqpgsglv nglgaalypr ridiqirrgs ttatpniirh
      421 ehndtttqqs dqrnpsvgsg nenhstqtts rvsdapsfag esgvrvvpir tmvaavpapl
      481 ghvpsdssgn tmgfyyplvg rfqhitpghl ngergsqpsg ehlstggqse qppvpesaaq
      541 hpsldestrd gslpnansrq qdrsnthsvn isdssvgrtq nnqdserqip snilqflraf
      601 fpsgefrvee sslqgtaags vpvqagtsrs gpaaepsitd eglflsnllh qimpyisqha
      661 gsqqstvptt ggntssqven srtrpsdsep nplnskrqkt e
//
LOCUS       XP_016726547             701 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-like domain-containing protein CIP73 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016726547
VERSION     XP_016726547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871058.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..701
                     /product="ubiquitin-like domain-containing protein CIP73
                     isoform X1"
                     /calculated_mol_wt=74716
     Region          22..92
                     /region_name="UBQ"
                     /note="Ubiquitin homologues; smart00213"
                     /db_xref="CDD:214563"
     CDS             1..701
                     /gene="LOC107938026"
                     /coded_by="XM_016871058.2:320..2425"
                     /db_xref="GeneID:107938026"
ORIGIN      
        1 mggtgddkip ihtetegset tieikiktla etytmrvdkq mpvpalkeqi asvtgvlseq
       61 qrlicrgkvl kddqllsayh vedghtlhmv vrqpvppsdg apnhsddlgs gtsrshgnhv
      121 psfvietsnm peqgdgvppe igrivsavlg mfgfanmasd vreqgsqrhe rtsgsgipes
      181 sqgqteqtsm rnqsdrehta fglpaavslg pmqppvipds latlsqylsh mkhefdgias
      241 rsgdrdsipa snsgtiredl ptpaslaevl qstrqmlidq ageclqllar qledqmnvtd
      301 tsarmiaqsn awrigvllhn lgslllelgr stmtlrlgqt pseavvnagp avfispsgpn
      361 rlmvqalpfq pgtslgtipm gtvqpgsglv nglgaalypr ridiqirrgs ttatpniirh
      421 ehndtttqqs dqrnpsvgsg nenhstqtts rvsdapsfag esgvrvvpir tmvaavpapl
      481 ghvpsdssgn tmgfyyplvg rfqhitpghl ngergsqpsg ehlstggqse qppvpesaaq
      541 hpsldestrd gslpnansrq qdrsnthsvn isdssvgrtq nnqdserqip snilqflraf
      601 fpsgefrvee sslqgtaags vpvqagtsrs gpaaepsitd eglflsnllh qimpyisqha
      661 gsqqstvptt ggntssqven srtrpsdsep nplnskrqkt e
//
LOCUS       XP_016726550             699 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-like domain-containing protein CIP73 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016726550
VERSION     XP_016726550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..699
                     /product="ubiquitin-like domain-containing protein CIP73
                     isoform X2"
                     /calculated_mol_wt=74459
     Region          22..92
                     /region_name="UBQ"
                     /note="Ubiquitin homologues; smart00213"
                     /db_xref="CDD:214563"
     CDS             1..699
                     /gene="LOC107938026"
                     /coded_by="XM_016871061.2:286..2385"
                     /db_xref="GeneID:107938026"
ORIGIN      
        1 mggtgddkip ihtetegset tieikiktla etytmrvdkq mpvpalkeqi asvtgvlseq
       61 qrlicrgkvl kddqllsayh vedghtlhmv vrqpvppsdg apnhsddlgs gtsrshgnhv
      121 psfvietsnm peqgdgvppe igrivsavlg mfgfanmasd vrgsqrhert sgsgipessq
      181 gqteqtsmrn qsdrehtafg lpaavslgpm qppvipdsla tlsqylshmk hefdgiasrs
      241 gdrdsipasn sgtiredlpt paslaevlqs trqmlidqag eclqllarql edqmnvtdts
      301 armiaqsnaw rigvllhnlg slllelgrst mtlrlgqtps eavvnagpav fispsgpnrl
      361 mvqalpfqpg tslgtipmgt vqpgsglvng lgaalyprri diqirrgstt atpniirheh
      421 ndtttqqsdq rnpsvgsgne nhstqttsrv sdapsfages gvrvvpirtm vaavpaplgh
      481 vpsdssgntm gfyyplvgrf qhitpghlng ergsqpsgeh lstggqseqp pvpesaaqhp
      541 sldestrdgs lpnansrqqd rsnthsvnis dssvgrtqnn qdserqipsn ilqflraffp
      601 sgefrveess lqgtaagsvp vqagtsrsgp aaepsitdeg lflsnllhqi mpyisqhags
      661 qqstvpttgg ntssqvensr trpsdsepnp lnskrqkte
//
LOCUS       XP_016726565             159 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S11 [Gossypium hirsutum].
ACCESSION   XP_016726565
VERSION     XP_016726565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871076.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="40S ribosomal protein S11"
                     /calculated_mol_wt=17680
     Region          1..156
                     /region_name="PTZ00241"
                     /note="40S ribosomal protein S11; Provisional"
                     /db_xref="CDD:240326"
     CDS             1..159
                     /gene="LOC107938039"
                     /coded_by="XM_016871076.2:159..638"
                     /db_xref="GeneID:107938039"
ORIGIN      
        1 maeqtekafl kqpkvflssk ksskgkrpgk ggnrfwksig lgfktpreai egtyidkkcp
       61 ftgtvsirgr ilagtchsak mirtivvrrn ylhyikkyqr yekrhsnipa hispcfrvke
      121 gdhviigqcr plsktvrfnv lkvipagssg ggkkaftgm
//
LOCUS       XP_016726554             185 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase ZNRF3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016726554
VERSION     XP_016726554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871065.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..185
                     /product="E3 ubiquitin-protein ligase ZNRF3 isoform X1"
                     /calculated_mol_wt=21291
     Region          138..180
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..185
                     /gene="LOC107938031"
                     /coded_by="XM_016871065.2:377..934"
                     /db_xref="GeneID:107938031"
ORIGIN      
        1 magmlagvec arrrrfhqsg gssdsvlgft rrpsfclyts nheslhssvf sqqrrviieg
       61 yedddeklge vareakerld erlrsqrkse pkrqnsketm nhmhgkcliq gelhrevfgs
      121 krrlgwmkls reelehdecv iclerfkage tlvrppcahr fhsrclvpwl ennghcpccr
      181 lgils
//
LOCUS       XP_016726555             184 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase ZNRF3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016726555
VERSION     XP_016726555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871066.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..184
                     /product="E3 ubiquitin-protein ligase ZNRF3 isoform X2"
                     /calculated_mol_wt=21163
     Region          137..179
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..184
                     /gene="LOC107938031"
                     /coded_by="XM_016871066.2:421..975"
                     /db_xref="GeneID:107938031"
ORIGIN      
        1 magmlagvec arrrrfhqsg gssdsvlgft rrpsfclyts nheslhssvf sqrrviiegy
       61 edddeklgev areakerlde rlrsqrksep krqnsketmn hmhgkcliqg elhrevfgsk
      121 rrlgwmklsr eelehdecvi clerfkaget lvrppcahrf hsrclvpwle nnghcpccrl
      181 gils
//
LOCUS       XP_040941640             147 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941640
VERSION     XP_040941640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085706.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..147
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16553
     CDS             1..147
                     /gene="LOC121212603"
                     /coded_by="XM_041085706.1:210..653"
                     /db_xref="GeneID:121212603"
ORIGIN      
        1 msgdhestsp ispaslkqkl kssfrlpwqr hqnnqrlaas asmtppspka ddnnsprlts
       61 stwlkspefk dkyrnlinri gnghrhshsh slgrrnsaef rydpssyaln fdegcddsqf
      121 defpfrnfta rlppspttnh nsreiaa
//
LOCUS       XP_040941641             654 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane 9 superfamily member 11 [Gossypium hirsutum].
ACCESSION   XP_040941641
VERSION     XP_040941641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085707.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..654
                     /product="transmembrane 9 superfamily member 11"
                     /calculated_mol_wt=73554
     Region          52..606
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..654
                     /gene="LOC121212604"
                     /coded_by="XM_041085707.1:1466..3430"
                     /db_xref="GeneID:121212604"
ORIGIN      
        1 masfgiwvlt iflvfqsgyg fylpgsyphk ykvgdplsvk vnsltsidte mpfsyyslpf
       61 ckpaegvkds aenlgellmg drienspyrf kmctnetlif lcqsgklsad efkllkerid
      121 emyqvnlild nlpairytvk egfvsrwtgy pigvkfqdmy yvfnhlkfkv lvhkyeetnv
      181 vrvmgtgdav dvfpsggkgg sdvpgymvvg fevipcsvmh ngnlvkdlkm ydkypseikc
      241 dtttvtvpik egepivftye vafeesdikw psrwdaylkm egskvhwfsi lnslmvitfl
      301 agivlviflr tvrrdltrye eldkeaqaql ieelsgwklv vgdvfrapsh pallcimvgd
      361 gvqilgmgvv tilfaalgfm spasrgtlit gmlffymilg iaagyvavrl wrtigcgdhk
      421 gwasvawkaa cffpgiafli ltilnfllwg shstgaipfs lfvillllwy cisvpltlvg
      481 gyfgakaphi eypvrtnqip reipaqkyps wllvlgagtl pfgtlfielf fimssiwmgr
      541 vyyvfgflli vmvllvvvca evslvltymh lcvedwkwww ksffasgsva iyiflysvny
      601 lifdlkslsg pvsatlylgy slfmvlaiml atgtigflss fwfvhylfss vkld
//
LOCUS       XP_016726531             315 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RZFP34 [Gossypium hirsutum].
ACCESSION   XP_016726531
VERSION     XP_016726531.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726531.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="probable E3 ubiquitin-protein ligase RZFP34"
                     /calculated_mol_wt=35823
     Region          70..152
                     /region_name="zf-CHY"
                     /note="CHY zinc finger; pfam05495"
                     /db_xref="CDD:461665"
     Region          205..249
                     /region_name="RING-H2_Pirh2-like"
                     /note="RING finger, H2 subclass, found in p53-induced
                     RING-H2 protein (Pirh2) and similar proteins; cd16464"
                     /db_xref="CDD:438127"
     Region          253..311
                     /region_name="zinc_ribbon_6"
                     /note="Zinc-ribbon; pfam14599"
                     /db_xref="CDD:464215"
     CDS             1..315
                     /gene="LOC107938017"
                     /coded_by="XM_016871042.2:1608..2555"
                     /db_xref="GeneID:107938017"
ORIGIN      
        1 msfsmeevei khsgaeelsy qqqnesceaf eeeargsfss qsggicvdkq esndaeatel
       61 ldkgfmeygc phyrrrcrir apccgeifdc rhchneaknn invdqklrhd lprrqiskii
      121 cslcgteqea qqvcincgvc mgkyfcntck lfdddtskrq yhcdgcgicr iggqenffhc
      181 hkcgccysil lknshpcveg amhhdcpicf eflfesrqdv tilpcghtih tnclkemrdh
      241 fqyacplcsk svcdmskvwe kfdeeiaaap mpeeyhnkiv silcndcgtk slvrfhvlaq
      301 kcpncksynt rqtrg
//
LOCUS       XP_040941642             315 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RZFP34 [Gossypium hirsutum].
ACCESSION   XP_040941642
VERSION     XP_040941642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085708.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="probable E3 ubiquitin-protein ligase RZFP34"
                     /calculated_mol_wt=35823
     Region          70..152
                     /region_name="zf-CHY"
                     /note="CHY zinc finger; pfam05495"
                     /db_xref="CDD:461665"
     Region          205..249
                     /region_name="RING-H2_Pirh2-like"
                     /note="RING finger, H2 subclass, found in p53-induced
                     RING-H2 protein (Pirh2) and similar proteins; cd16464"
                     /db_xref="CDD:438127"
     Region          253..311
                     /region_name="zinc_ribbon_6"
                     /note="Zinc-ribbon; pfam14599"
                     /db_xref="CDD:464215"
     CDS             1..315
                     /gene="LOC107938017"
                     /coded_by="XM_041085708.1:2925..3872"
                     /db_xref="GeneID:107938017"
ORIGIN      
        1 msfsmeevei khsgaeelsy qqqnesceaf eeeargsfss qsggicvdkq esndaeatel
       61 ldkgfmeygc phyrrrcrir apccgeifdc rhchneaknn invdqklrhd lprrqiskii
      121 cslcgteqea qqvcincgvc mgkyfcntck lfdddtskrq yhcdgcgicr iggqenffhc
      181 hkcgccysil lknshpcveg amhhdcpicf eflfesrqdv tilpcghtih tnclkemrdh
      241 fqyacplcsk svcdmskvwe kfdeeiaaap mpeeyhnkiv silcndcgtk slvrfhvlaq
      301 kcpncksynt rqtrg
//
LOCUS       XP_016726532             315 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RZFP34 [Gossypium hirsutum].
ACCESSION   XP_016726532
VERSION     XP_016726532.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726532.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="probable E3 ubiquitin-protein ligase RZFP34"
                     /calculated_mol_wt=35823
     Region          70..152
                     /region_name="zf-CHY"
                     /note="CHY zinc finger; pfam05495"
                     /db_xref="CDD:461665"
     Region          205..249
                     /region_name="RING-H2_Pirh2-like"
                     /note="RING finger, H2 subclass, found in p53-induced
                     RING-H2 protein (Pirh2) and similar proteins; cd16464"
                     /db_xref="CDD:438127"
     Region          253..311
                     /region_name="zinc_ribbon_6"
                     /note="Zinc-ribbon; pfam14599"
                     /db_xref="CDD:464215"
     CDS             1..315
                     /gene="LOC107938017"
                     /coded_by="XM_016871043.2:320..1267"
                     /db_xref="GeneID:107938017"
ORIGIN      
        1 msfsmeevei khsgaeelsy qqqnesceaf eeeargsfss qsggicvdkq esndaeatel
       61 ldkgfmeygc phyrrrcrir apccgeifdc rhchneaknn invdqklrhd lprrqiskii
      121 cslcgteqea qqvcincgvc mgkyfcntck lfdddtskrq yhcdgcgicr iggqenffhc
      181 hkcgccysil lknshpcveg amhhdcpicf eflfesrqdv tilpcghtih tnclkemrdh
      241 fqyacplcsk svcdmskvwe kfdeeiaaap mpeeyhnkiv silcndcgtk slvrfhvlaq
      301 kcpncksynt rqtrg
//
LOCUS       XP_016726544            1675 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016726544
VERSION     XP_016726544.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871055.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726544.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1675
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=189412
     Region          370..420
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(378,383,385,403,405,407)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     Region          <1258..1357
                     /region_name="EPL1"
                     /note="Enhancer of polycomb-like; pfam10513"
                     /db_xref="CDD:463128"
     CDS             1..1675
                     /gene="LOC107938024"
                     /coded_by="XM_016871055.2:466..5493"
                     /db_xref="GeneID:107938024"
ORIGIN      
        1 menrvlnshg aeipkksrsl dlkslyesgd skeffknksl krkessqegd dekrstinnk
       61 rkksrkalpl ssfrtnhdss ssksltevyd ggvcsglhgp eslkkfglsq kskngcsang
      121 islslgdsgt siprrkggfv grnkfesgqv lkpdgrpssv vvgvsedvkl asedsstqnv
      181 slkveeekli ddfkesrsse pssvqhlkee dsvaghsavn dgdsslkrsr rkprkkkdtv
      241 kggksfakkv erlvdssvkp fgdlqdddee nleenaarml ssrfdpsctg fslnskvsls
      301 psenglsfll asgrdassrs kkfsgcesps ldasarvlrp rerhgekgns rkrrhfyeif
      361 sgdldanwvl nrkikvfwpl dkswyygfvn dydkerklhh vkyddrdeew vnlqeerfkl
      421 llfpsevpnk sepkrsqgdg dtgdrirnmk lnkenrkrna mkeddsgngs ymesepiisw
      481 larssrrvks lplhavkrqk tsasccfhrq plscdeavde ngclhggslk arkvklfgss
      541 alsdrpvdgr iiedsslgsc pkdgkhpivy frrrfrrtek vlwqasestc gasmvskpit
      601 flgsvddfrd lgelnvclgr ldpegdllft dnagqlqlni sllhskqfrf glsfpmlsvn
      661 nlfgvksfwl vhsllllqcg tvmtiwpivh levlfvdnev glrfllfqgs lkeavafifq
      721 vlkvfyrsae lgkfadvrvp vtsirfkfsl tqdfrkqivf accyfhevkh fkwmfldckl
      781 krycvlnrql plsectydni kalqngtnql fsspykgsss legsrrryrq glsrmgvsrg
      841 ysclevgqls sssekqnknl plftlffgaa stffislhlk llmdycvari sfqdhdsien
      901 pessgnllld ensnredcvk ksfesclgnf lkasskvasv telmtldlsv ssdgrwrksl
      961 qkhgnsdqiv ngspaiyhkp eevgasaigq lekqkcdyse sqqpflsskv vdgckkgsgs
     1021 ssvlngitve lppfdqykvh vdsklpstqr stdltwnkng gviptpnpta prsywhrnrs
     1081 sssigyhahr wsdgkadffh nnfgngpkkp rtqvsysmpf ggldysskni gdhqrglphk
     1141 rirranekrs sdvsrgsqkn melvschanl lltlgdrgwr ecgaqvaler idrnewklav
     1201 kmsgstrcsy kahqflqpgs anrythammw kggkdwilef tdrsqwaifk dmheecynrn
     1261 iraasvknip ipgvclvhdy denatdvtfv rssfkylrqv etdvemaldp shvfydmdtd
     1321 deqwisgihr ssqsdgscst lefsdemfek vmdmfekaay tqqcdqfnsd eieelmagvg
     1381 smevitavye hwrekrqrvg mplirhlqpp lweryeqqvr eweltmskvs sipsnavekp
     1441 pmfafclkpr glqvpnrgsk qrsqrkisvs gqinpafgdh egfhsfgrrs ngflfgdekv
     1501 lyplhnyesl edsplfqasp rvfsqldsgi kgyfrdgfdk hhhqklrrse skkictflsp
     1561 nesqmttsys qrligkrngi hqqsmafsew psmhhyfsdg lqrhgpeqld npdtdefryr
     1621 daasaarhal kmakfkrera qrllfradla ihkavvalmt aeaikassdi vngdg
//
LOCUS       XP_016726545            1632 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016726545
VERSION     XP_016726545.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871056.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726545.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1632
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=183962
     Region          370..420
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(378,383,385,403,405,407)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     Region          <1215..1314
                     /region_name="EPL1"
                     /note="Enhancer of polycomb-like; pfam10513"
                     /db_xref="CDD:463128"
     CDS             1..1632
                     /gene="LOC107938024"
                     /coded_by="XM_016871056.2:466..5364"
                     /db_xref="GeneID:107938024"
ORIGIN      
        1 menrvlnshg aeipkksrsl dlkslyesgd skeffknksl krkessqegd dekrstinnk
       61 rkksrkalpl ssfrtnhdss ssksltevyd ggvcsglhgp eslkkfglsq kskngcsang
      121 islslgdsgt siprrkggfv grnkfesgqv lkpdgrpssv vvgvsedvkl asedsstqnv
      181 slkveeekli ddfkesrsse pssvqhlkee dsvaghsavn dgdsslkrsr rkprkkkdtv
      241 kggksfakkv erlvdssvkp fgdlqdddee nleenaarml ssrfdpsctg fslnskvsls
      301 psenglsfll asgrdassrs kkfsgcesps ldasarvlrp rerhgekgns rkrrhfyeif
      361 sgdldanwvl nrkikvfwpl dkswyygfvn dydkerklhh vkyddrdeew vnlqeerfkl
      421 llfpsevpnk sepkrsqgdg dtgdrirnmk lnkenrkrna mkeddsgngs ymesepiisw
      481 larssrrvks lplhavkrqk tsasccfhrq plscdeavde ngclhggslk arkvklfgss
      541 alsdrpvdgr iiedsslgsc pkdgkhpivy frrrfrrtek vlwqasestc gasmvskpit
      601 flgsvddfrd lgelnvclgr ldpegdllft dnagqlqlni sllhskqfrf glsfpmlsvn
      661 nlfgvksfwl vhsllllqcg tvmtiwpivh levlfvdnev glrfllfqgs lkeavafifq
      721 vlkvfyrsae lgkfadvrvp vtsirqlpls ectydnikal qngtnqlfss pykgsssleg
      781 srrryrqgls rmgvsrgysc levgqlssss ekqnknlplf tlffgaastf fislhlkllm
      841 dycvarisfq dhdsienpes sgnllldens nredcvkksf esclgnflka sskvasvtel
      901 mtldlsvssd grwrkslqkh gnsdqivngs paiyhkpeev gasaigqlek qkcdysesqq
      961 pflsskvvdg ckkgsgsssv lngitvelpp fdqykvhvds klpstqrstd ltwnknggvi
     1021 ptpnptaprs ywhrnrssss igyhahrwsd gkadffhnnf gngpkkprtq vsysmpfggl
     1081 dyssknigdh qrglphkrir ranekrssdv srgsqknmel vschanlllt lgdrgwrecg
     1141 aqvaleridr newklavkms gstrcsykah qflqpgsanr ythammwkgg kdwileftdr
     1201 sqwaifkdmh eecynrnira asvknipipg vclvhdyden atdvtfvrss fkylrqvetd
     1261 vemaldpshv fydmdtddeq wisgihrssq sdgscstlef sdemfekvmd mfekaaytqq
     1321 cdqfnsdeie elmagvgsme vitavyehwr ekrqrvgmpl irhlqpplwe ryeqqvrewe
     1381 ltmskvssip snavekppmf afclkprglq vpnrgskqrs qrkisvsgqi npafgdhegf
     1441 hsfgrrsngf lfgdekvlyp lhnyesleds plfqasprvf sqldsgikgy frdgfdkhhh
     1501 qklrrseskk ictflspnes qmttsysqrl igkrngihqq smafsewpsm hhyfsdglqr
     1561 hgpeqldnpd tdefryrdaa saarhalkma kfkreraqrl lfradlaihk avvalmtaea
     1621 ikassdivng dg
//
LOCUS       XP_040941643             462 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At1g12760 [Gossypium hirsutum].
ACCESSION   XP_040941643
VERSION     XP_040941643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085709.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..462
                     /product="E3 ubiquitin-protein ligase At1g12760"
                     /calculated_mol_wt=50288
     Region          363..407
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(363,366,381,383,386,389,400,403)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..462
                     /gene="LOC121203448"
                     /coded_by="XM_041085709.1:403..1791"
                     /db_xref="GeneID:121203448"
ORIGIN      
        1 mgvpssglhs eyqtdtcpll meqpkdfngh vidmpriddt sssnssygtt sngldvlqhv
       61 drpstsaral vsepsqpsts ssngtnsris ssvrrgdarr rrsplnsvlw isvelvltvs
      121 qivasivvls lsrnehprtp lfawivgyss gcvatlplly wryrhhnqas eqdsaqnrha
      181 shnnaparsf sfsvtrtsdg gdhrtattlp rggqnmgits arikalveyf kmildcffav
      241 wfvvgnvwif gghssaseap nlyrlcivfl tiscigyaip filcaticcc lpciisvlgf
      301 redlsharga tpesiealpt ykfkvkknrn sdgkdvnsga seggvvaagt ekeriisged
      361 avcciclaky tnneelrelp cshfmhkecv dkwlkinasc plckndigen vldaisgtst
      421 asilsslsga hdnqrraays lmvfllmcwv vvpsilygyl tg
//
LOCUS       XP_040941644             462 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At1g12760 [Gossypium hirsutum].
ACCESSION   XP_040941644
VERSION     XP_040941644.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085710.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..462
                     /product="E3 ubiquitin-protein ligase At1g12760"
                     /calculated_mol_wt=50288
     Region          363..407
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(363,366,381,383,386,389,400,403)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..462
                     /gene="LOC121203448"
                     /coded_by="XM_041085710.1:487..1875"
                     /db_xref="GeneID:121203448"
ORIGIN      
        1 mgvpssglhs eyqtdtcpll meqpkdfngh vidmpriddt sssnssygtt sngldvlqhv
       61 drpstsaral vsepsqpsts ssngtnsris ssvrrgdarr rrsplnsvlw isvelvltvs
      121 qivasivvls lsrnehprtp lfawivgyss gcvatlplly wryrhhnqas eqdsaqnrha
      181 shnnaparsf sfsvtrtsdg gdhrtattlp rggqnmgits arikalveyf kmildcffav
      241 wfvvgnvwif gghssaseap nlyrlcivfl tiscigyaip filcaticcc lpciisvlgf
      301 redlsharga tpesiealpt ykfkvkknrn sdgkdvnsga seggvvaagt ekeriisged
      361 avcciclaky tnneelrelp cshfmhkecv dkwlkinasc plckndigen vldaisgtst
      421 asilsslsga hdnqrraays lmvfllmcwv vvpsilygyl tg
//
LOCUS       XP_016726529             326 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-32 [Gossypium hirsutum].
ACCESSION   XP_016726529
VERSION     XP_016726529.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871040.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726529.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="syntaxin-32"
                     /calculated_mol_wt=36145
     Region          250..325
                     /region_name="SNARE_syntaxin5"
                     /note="SNARE motif of syntaxin 5; cd15844"
                     /db_xref="CDD:277197"
     Site            order(251,253..254,256..261,263..265,267..268,270..272,
                     274..275,277..279,281..282,284..289,291..296,298..303,
                     305..307)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277197"
     Site            281
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277197"
     CDS             1..326
                     /gene="LOC107938015"
                     /coded_by="XM_016871040.2:415..1395"
                     /db_xref="GeneID:107938015"
ORIGIN      
        1 mkakavqssf rdrtqeflsv serlrksits gtsqngpsss ssraeekrsv vahqsefnrr
       61 askigfgihq tsqklsklak lakrtsvfdd ptmeiqelta vikqditaln savvdlqlfc
      121 nskneggvss dtsshsttvv ddlknrlmsa tkefkdvltm rtenlkvhen rrqlfsstas
      181 kdspnpfirq rplaaksaag asnnlpqwan gsasssqlfp rkqvdaesqp flqqqqqhqq
      241 qmvplqdsym qsraealqnv estihelgti fnqlatlvsq qgeiairide nmddtlsnve
      301 gaqgallkyl nsissnrwlm mkifly
//
LOCUS       XP_040941645             318 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional regulator ATRX homolog [Gossypium hirsutum].
ACCESSION   XP_040941645
VERSION     XP_040941645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085711.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..318
                     /product="transcriptional regulator ATRX homolog"
                     /calculated_mol_wt=35011
     CDS             1..318
                     /gene="LOC121212605"
                     /coded_by="XM_041085711.1:431..1387"
                     /db_xref="GeneID:121212605"
ORIGIN      
        1 maggssrrqe gslvinntnv faaletlrrk kksdkdrgss kksssksqqq pekeaepqvf
       61 wspapltgks wadvdddddy yattappqpd wrssepsqsl ednnshveds eseedileeg
      121 dddieedhdh epesqvhpep vlekaaevpp ppkeperqls kkerkkkela elealladfg
      181 vtqkesngqd eshdavqenk dgkgekkenp vgesksakkk kkkdktkegk esqdqptcad
      241 attngpdeva gteqteedas aidvkerlkk vasmkkkkss kemdaaakaa aqeaaarsar
      301 laaakkkekn hynqqpvr
//
LOCUS       XP_040941646             176 aa            linear   PLN 06-AUG-2024
DEFINITION  photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040941646
VERSION     XP_040941646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085712.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="photosynthetic NDH subunit of subcomplex B 3,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=19211
     Region          63..>157
                     /region_name="NqrF"
                     /note="Na+-transporting NADH:ubiquinone oxidoreductase,
                     subunit NqrF [Energy production and conversion]; COG2871"
                     /db_xref="CDD:442118"
     Region          111..>172
                     /region_name="COG3894"
                     /note="Uncharacterized 2Fe-2S and 4Fe-4S
                     clusters-containing protein, contains DUF4445 domain
                     [Function unknown]"
                     /db_xref="CDD:443101"
     CDS             1..176
                     /gene="LOC121212606"
                     /coded_by="XM_041085712.1:98..628"
                     /db_xref="GeneID:121212606"
ORIGIN      
        1 maslsltsit pqpttgfslk nsnnysnptt kflakkrhvv ltlatpspqt sssttsekpe
       61 ieleflgskp gsdgsypvdk ataisgqkll rnimldnnie lyaaygkvmn cggfgncgtc
      121 iveivdgkdl lnertkdelr ylkkkpeswr lacrtivgnk ensgkvvvqr lpqwkk
//
LOCUS       XP_040941647             158 aa            linear   PLN 06-AUG-2024
DEFINITION  photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040941647
VERSION     XP_040941647.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085713.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="photosynthetic NDH subunit of subcomplex B 3,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=17440
     CDS             1..158
                     /gene="LOC121212606"
                     /coded_by="XM_041085713.1:85..561"
                     /db_xref="GeneID:121212606"
ORIGIN      
        1 maslsltsit pqpttgfslk nsnnysnptt kflakkrhvv ltlatpspqt sssttsekpe
       61 ieleflgskp gsdgsypvdk ataisgqkll rnimldnnie lyaayivdgk dllnertkde
      121 lrylkkkpes wrlacrtivg nkensgkvvv qrlpqwkk
//
LOCUS       XP_016726506             284 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 93 [Gossypium hirsutum].
ACCESSION   XP_016726506
VERSION     XP_016726506.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871017.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726506.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..284
                     /product="coiled-coil domain-containing protein 93"
                     /calculated_mol_wt=32156
     Region          5..>260
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..284
                     /gene="LOC107937993"
                     /coded_by="XM_016871017.2:118..972"
                     /db_xref="GeneID:107937993"
ORIGIN      
        1 mqegsseqef nsirasiail nsnldqqnqr kisvlnelqn lqekirkega eskvkkfvsl
       61 lenlkllerq eseircdfda krssleaevs dleekiaags dskmlsrgld gslnesllkl
      121 niakrelaar lraivsikrq lddapsqsel iqyerrlsel nahiqeklqq trkfyatyna
      181 lleikelilk etsllnsins qfqeaiastt grmkliesmq givkgsqqkl gkvqlglqee
      241 qkvcdalker ytaamaeqrr cysllkafqe ecarneklqt qtss
//
LOCUS       XP_016726508             321 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016726508
VERSION     XP_016726508.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871019.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726508.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36556
     Region          4..299
                     /region_name="PcbC"
                     /note="Isopenicillin N synthase and related dioxygenases
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG3491"
                     /db_xref="CDD:442714"
     CDS             1..321
                     /gene="LOC107937996"
                     /coded_by="XM_016871019.2:111..1076"
                     /db_xref="GeneID:107937996"
ORIGIN      
        1 mdrtatipvi efsgedikng rsssspdqrw kalcrkvrea ceshgcfllm rydkiptslc
       61 edmlvgiksl fdlpeetktk yqnpkpyrsy qgkcpmvplh esfgiddatr leaardfthl
      121 mwpqgnpafc eilnmmsskm lelsfmilem ifesfdieek kyealvrdsv sflrvmkykv
      181 ptsgdqnlgl vahtdknait ilcqnevqgl eivtkeghwk qvvvpkdalv vivgdalkaw
      241 sngrlvavkh rvvmkgeker ysfglftvpk egamieaare lvdnehplly rpfkfadyfs
      301 yfvsnlndda leiyaaslkk r
//
LOCUS       XP_040941648             329 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_040941648
VERSION     XP_040941648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085714.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..329
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=37784
     Region          5..284
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..329
                     /gene="LOC121212607"
                     /coded_by="XM_041085714.1:88..1077"
                     /db_xref="GeneID:121212607"
ORIGIN      
        1 mgvdaelaip viefrtssld lergtegwhh lckrvreace tygcfevvye kisrevreet
       61 fellnelvdv plerkqlnvn pkpyhsyfgp csqaclyegf giedasnyds vnnfaqlmwp
      121 dghprfsqti ntmvkqmeel nniiwlmiid syglrekwes lmmrynvllr mmkymapslg
      181 eykrgllaht dkpastiicd dqisgleiev kddkwiklst spnsfvflvg dplmawsngr
      241 mkavkhrvmm rgandrysia aftipvegti ikapkelidd qhpqlfkdfd fmdflffsfs
      301 eqvklidspd qiyafaslsp pisdqkhgs
//
LOCUS       XP_040941649             322 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_040941649
VERSION     XP_040941649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085715.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36575
     Region          5..283
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..322
                     /gene="LOC107938007"
                     /coded_by="XM_041085715.1:74..1042"
                     /db_xref="GeneID:107938007"
ORIGIN      
        1 mgvnaeiefp viefrpsdlk rgtdgwhrlc krvreacetf gcfevvyeki sakvreetfe
       61 lmkeliavpv erkqknvspl pyhgwvgpcn qvsllyegfg ledasnydsv ksftqlmwpd
      121 ghprfcntlh tmttqieeln kliwlmiids yglgekwesv minykslvrf mkymapppge
      181 yekglfahtd kpvstiicdd qvsgleievn gqwiklslsp ssfcfvvgdp lkawsngrlk
      241 avnhrvimsg ekdrfsiatf aipvegtiik apkelideqh pqlfkdfdfm dfflfafskp
      301 akhidsgeql qafaslsppi sd
//
LOCUS       XP_016726556             324 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016726556
VERSION     XP_016726556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871067.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36739
     Region          5..287
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..324
                     /gene="LOC107938033"
                     /coded_by="XM_016871067.2:87..1061"
                     /db_xref="GeneID:107938033"
ORIGIN      
        1 mgvnaeivvp vieflssdle rgtdgwhhlc krvreacety gcfevvyerv skkvreemfg
       61 lvkelvqvpl erkqknaspl pyhgwvgpcs qvsllyegfg lgdasnydsv krfaqlmwpd
      121 dhprfcdtvh tlatqmeeln kliwlmifes yglgekfesl minyktlvrm mkymapppge
      181 yesglfahte kpvstviced qvsgleievk dgqwiklsnl spssfvfvvg dplkawsngr
      241 lkavnhrvmm sgdkdrysia afaipgegti iktpkelide qhpqlykdfd fmdffrfafs
      301 drakniesge qlhafaslsp pisd
//
LOCUS       XP_016726558             323 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016726558
VERSION     XP_016726558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871069.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36601
     Region          5..286
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..323
                     /gene="LOC107938035"
                     /coded_by="XM_016871069.2:80..1051"
                     /db_xref="GeneID:107938035"
ORIGIN      
        1 mgvnaeiefp viefrssdlq rgtdgwhrlc krvreacetf gcfevvyeki spkvreetfg
       61 lmkelvevpv erkqknaspm pyhgwvgpcs qvsllyegfg lgdasnydsv ksfaqlmwpd
      121 ghprfcntih tmatqieeln kliwlmlids yglgdkwesv minyktlvrf mkymapppre
      181 yerglfahtd kpvstiicdd qvsgleievn dgqwiklsls pssfcfvvgd plkawsngrl
      241 kavnhrvmms gdkdrlslaa faipvegtii kapkelideq hpqlykdfdf mdfflfafsd
      301 pakhidsgeq lqafaslspp ish
//
LOCUS       XP_016726557             323 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016726557
VERSION     XP_016726557.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016726557.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36534
     Region          5..318
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..323
                     /gene="LOC107938034"
                     /coded_by="XM_016871068.2:83..1054"
                     /db_xref="GeneID:107938034"
ORIGIN      
        1 mgvnaeiefp viqfrssdle rgtdgwhrlc nrvreacetf gcfevvyeki ttkvreetfg
       61 lmkelvevpl erkqknaspm pyhgwvgpcn qvsllyegfg lgdasnydsv ksfaqlmwpd
      121 ghprfcntvh tvatqieeln kliwlmlids yglgekwesv minyktlvrf mkymapppge
      181 yerglfahtd kpvstiicdd nvsgleievn ngqwiklsls pssfcfvvgd plkawsngrl
      241 kavnhrvmms gdkdrfslaa faipvegtii kapkelideq hpqlykdfdf mgyflfafsd
      301 pakhidsgeq lqayaslspp isy
//
LOCUS       XP_040941650             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1.2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941650
VERSION     XP_040941650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085716.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..163
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1.2 isoform X1"
                     /calculated_mol_wt=18151
     Region          <13..144
                     /region_name="PLN02947"
                     /note="oxidoreductase"
                     /db_xref="CDD:215510"
     CDS             1..163
                     /gene="LOC121212610"
                     /coded_by="XM_041085716.1:652..1143"
                     /db_xref="GeneID:121212610"
ORIGIN      
        1 minyktlvrf ikymapppge yerglfahtd kpvstiicdd qvsgleievn dgqwiklsls
       61 pssfcfvvgd plkawsngrl kavnhrvmms gdkdrlslaa faipiegtii kapkelideq
      121 hpqlykdfnf mdfflfafsd pakhidsgeq lqafaslspp isn
//
LOCUS       XP_040941651             132 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941651
VERSION     XP_040941651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085717.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1 isoform X2"
                     /calculated_mol_wt=15044
     Region          5..>124
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..132
                     /gene="LOC121212610"
                     /coded_by="XM_041085717.1:85..483"
                     /db_xref="GeneID:121212610"
ORIGIN      
        1 mgvqaeiqfp viefrsadle rgtdgwhrlc krvreacetf gcfevvyeki sskvrqetfg
       61 lmkelievpv erkqknaspm pyhgwvgpcn qvsllyegfg lgdasnydsv ksfaqlmwpd
      121 ghprfwhgvm ed
//
LOCUS       XP_016731175             132 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016731175
VERSION     XP_016731175.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875686.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731175.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=14978
     Region          5..>124
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..132
                     /gene="LOC107942042"
                     /coded_by="XM_016875686.2:235..633"
                     /db_xref="GeneID:107942042"
ORIGIN      
        1 mavdaeivfp viefhssdle rgtegwnrlc krvreacetf gcfevvyeki sknvredvfg
       61 llkelfdvpv erkqkntspi pfhgwvgpck eisllyegfg lgdasnydsi ksfaqvmwpd
      121 ghphfwygvm gd
//
LOCUS       XP_040941653             323 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_040941653
VERSION     XP_040941653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085719.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..323
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36492
     Region          33..286
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..323
                     /gene="LOC121212611"
                     /coded_by="XM_041085719.1:310..1281"
                     /db_xref="GeneID:121212611"
ORIGIN      
        1 mpgvnpeief paiefrssdl krgtegwnrl ckrvqracet fgcfevvyek vstklredaf
       61 glmkemvelp vetkqknnsp mpyhgwvgpc kqvsvlyegf gvgdasnyds vksfaqlmwp
      121 nghphfsdti htlatqmedl nkliwlmlid syglgddslk mnyttlvrmm kymapppgey
      181 erglfahtdk pvstlicedq isgleievnd gqwikltnls pssfvfvvgd plkawsngrl
      241 ksvnhrvmms gdkdrysiaa fvipnegtii ktpkefiddq hprlfkdldf mefflfafsd
      301 parhidngel lhvfaglsps vsn
//
LOCUS       XP_016731174             322 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016731174
VERSION     XP_016731174.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875685.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36380
     Region          32..289
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..322
                     /gene="LOC107942041"
                     /coded_by="XM_016875685.2:76..1044"
                     /db_xref="GeneID:107942041"
ORIGIN      
        1 mgvnaenkfp aiefrssdlk rgtdgwrnlc kkvqeacekf gcfevvydti stkvreesfg
       61 lmkelvevpv erkqkntspm pyhgwvgpce qvsllyegfg ignasnydsv ksftqlmwpe
      121 ghphfcdtih tigtqmeeln kliwlmlids yglgddslkl nyttlvrmmk ymapppgeye
      181 rglfahtdkp vstlicedqv sgleievndg qwikltnlsp ssfvyvvgdp lrawsngrlk
      241 svnhrvmmsg dkdrysiaaf aipnegtiik tpkeliddqh pqlfkdfdfm efflfafsnp
      301 arhidngell hvfaglsppv sn
//
LOCUS       XP_016731178             348 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016731178
VERSION     XP_016731178.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875689.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..348
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40567
     Region          <52..177
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     CDS             1..348
                     /gene="LOC107942047"
                     /coded_by="XM_016875689.2:2055..3101"
                     /db_xref="GeneID:107942047"
ORIGIN      
        1 mretklelvt mdvvrklwgd dncefrfvaa tgrsgglltm wnkdeflllk ewsdgrllvi
       61 kgrwvkedle vvlinvyapn lvyeqsilwg vlteliiqfa spwirggdfn vvqcrsersr
      121 cvgstkgsre fdnfiqtckl idlplvgkkf twyepdnkks rldrflveeh wliqikdlqq
      181 lglkrsvsdh ipilladvei dwgpkpfkfi ngwfkkkeca sliekgwsni gslnghltrk
      241 lrklkgvlkk wngdncnvle nriveyedri kvldgisdkr vlnegemegl krlnvevwda
      301 mkfkeslwqq ksrmmwlkeg dantaffhra akikakrkti yrmkigrs
//
LOCUS       XP_040941654             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941654
VERSION     XP_040941654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085720.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12637
     CDS             1..111
                     /gene="LOC107942046"
                     /coded_by="XM_041085720.1:1586..1921"
                     /db_xref="GeneID:107942046"
ORIGIN      
        1 maflmmmdle tlydvweryn dllrrcphhg lplclevqtf yngvnpstrq lidaatggtl
       61 nnetpeeaye fieemplnnh qwqvmrikst katsvfnldv atvlsnqesl g
//
LOCUS       XP_040941655             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941655
VERSION     XP_040941655.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085721.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12637
     CDS             1..111
                     /gene="LOC107942046"
                     /coded_by="XM_041085721.1:1571..1906"
                     /db_xref="GeneID:107942046"
ORIGIN      
        1 maflmmmdle tlydvweryn dllrrcphhg lplclevqtf yngvnpstrq lidaatggtl
       61 nnetpeeaye fieemplnnh qwqvmrikst katsvfnldv atvlsnqesl g
//
LOCUS       XP_040941656             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941656
VERSION     XP_040941656.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085722.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..111
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12637
     CDS             1..111
                     /gene="LOC107942046"
                     /coded_by="XM_041085722.1:1521..1856"
                     /db_xref="GeneID:107942046"
ORIGIN      
        1 maflmmmdle tlydvweryn dllrrcphhg lplclevqtf yngvnpstrq lidaatggtl
       61 nnetpeeaye fieemplnnh qwqvmrikst katsvfnldv atvlsnqesl g
//
LOCUS       XP_016729531             321 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016729531
VERSION     XP_016729531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36516
     Region          5..309
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..321
                     /gene="LOC107940602"
                     /coded_by="XM_016874042.2:115..1080"
                     /db_xref="GeneID:107940602"
ORIGIN      
        1 maidaeiefp tielrssdlk rgtegwnrlc krvreacetf gcfdvvykki stkiredafe
       61 lqkelvevpv erkqkntspl pchgwvgpce qvsmlyegfg vadasnydsv nnfaqlmwpn
      121 gqprftdtih tlatqmeeln kliwlmltds yglqedslkm nyktlvrmmk ylapppgeye
      181 rgffahtdkp istlicedks gleievnndq wikltnlsps sfvfivgdpl kawsngrlkp
      241 vnhrvmmsgd kdrysiaafi ipnegtiika pkelidekhp qlfkefdfmd fflyaisdpa
      301 khidsgellh ayaslsppvs n
//
LOCUS       XP_016727313             316 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016727313
VERSION     XP_016727313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871824.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..316
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36054
     Region          5..283
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..316
                     /gene="LOC107938603"
                     /coded_by="XM_016871824.2:51..1001"
                     /db_xref="GeneID:107938603"
ORIGIN      
        1 msvdakiefp viefrssdle rgtngwyrlc kkvreaceif gcfevvydti stevreemfr
       61 lmkelvevpv erkqkntspl pyhgwvgpca qvsllyegfg lgdvadydsv knfaqlmwpe
      121 ghsrfcdtih tmgtqlevln klillmiids ygladdslki kyttsmrmmk ymtpppgece
      181 iglfahtdkp vstiicedqi pgleievndg rwikltnlsp ssfvfmvgdp lkawsngrlk
      241 stnhrvmmsg dkdrfsiaaf impnegtiik tpkelideeh pqlfkdfdfm kffffafsnp
      301 arhidngqll ydfaal
//
LOCUS       XP_016727311             327 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016727311
VERSION     XP_016727311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871822.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..327
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=37385
     Region          5..283
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..327
                     /gene="LOC107938601"
                     /coded_by="XM_016871822.2:88..1071"
                     /db_xref="GeneID:107938601"
ORIGIN      
        1 msvdakiefp viefrssdle rgtngwyrlc kkvreaceif gcfevvydti stevreemfr
       61 lmkelvevpv erkqkntspl pyhgwvgpca qvsllyegfg lgdvsnydsv knfaqlmwpe
      121 ghprfcdtih tigtqlevln klillmiids yglaedslki nyttsmrmmk ymtpppgeye
      181 iglfphtdkp vstiicedqi pgleievndg rwirltnlsp ssfvfmvgdp lkawsngrlk
      241 stnhrvmmsg nkdrfsiaaf impnegtiik tpkefidkeh pqlfkdfdfm kffffafsnp
      301 arhidngqll ydfaalsppv snahmek
//
LOCUS       XP_016727312             322 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016727312
VERSION     XP_016727312.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871823.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=36385
     Region          5..289
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..322
                     /gene="LOC107938602"
                     /coded_by="XM_016871823.2:77..1045"
                     /db_xref="GeneID:107938602"
ORIGIN      
        1 msaaakiefp viefrssdle rgtdgwhrlc kkvreacetf gcfevvydti stevreemfr
       61 lmkelvevpv erkqknvlps pthgwvgpns hvsplyegfg lgdvsnydsv knfaqlmwpe
      121 ghprfcdtah tmgtqlevln kliwlmlids yglgddslkm nyttvmrmmk ymppspgene
      181 igffahtdkp astlicenqi pgleievndg qwikltnlss ssfvfvvgdp lmawsngrlk
      241 sakhrvvirg dkdrfsiaaf vlpnkgtiik tpkelmdeqh prvfkdfdfm efysfafsdp
      301 arsrdsgqvl ydfaalsppv si
//
LOCUS       XP_016727335             322 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive 2-oxoglutarate-dependent dioxygenase AOP2
            [Gossypium hirsutum].
ACCESSION   XP_016727335
VERSION     XP_016727335.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871846.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727335.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="probable inactive 2-oxoglutarate-dependent
                     dioxygenase AOP2"
                     /calculated_mol_wt=36367
     Region          32..317
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..322
                     /gene="LOC107938615"
                     /coded_by="XM_016871846.2:79..1047"
                     /db_xref="GeneID:107938615"
ORIGIN      
        1 mtvdakielp viefrssdle rgtngwhqlc kkvreacetf gcfevvydti stevreemfr
       61 lmkelvevpv erkqknvlpp pspgwvgpgs hvsplyegfg lgdvsnydsv knfaqlmwpe
      121 ghprfcdtah tmgtqlevln kliwlmlids yglgddslkm nyttfmrmmk ymppppgene
      181 igffahtdkl vstlicenqi pgleievndg qwirmtnlsp ssfvfvvgda lmawsngrlk
      241 aakhrvlikg dkdrfsiaaf ilpnkgtiik ipkelideqh prifkdldfm efyslafsdp
      301 tksrdsgqll hkfaalsppv sn
//
LOCUS       XP_016727336             120 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727336
VERSION     XP_016727336.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871847.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..120
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12801
     CDS             1..120
                     /gene="LOC107938616"
                     /coded_by="XM_016871847.2:1..363"
                     /db_xref="GeneID:107938616"
ORIGIN      
        1 mrhrfmfstk tklrnpklnt qslkkkskqn ktsfpshsae pkkraphsiv pfasllgrsw
       61 vssashappp ivahgsgtke trgvpwsksm plkgspmaet aglqggdgtr wrrggasggt
//
LOCUS       XP_040941657             115 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941657
VERSION     XP_040941657.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085723.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..115
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12574
     CDS             1..115
                     /gene="LOC107938616"
                     /coded_by="XM_041085723.1:1..348"
                     /db_xref="GeneID:107938616"
ORIGIN      
        1 mrhrfmfstk tklrnpklnt qslkkkskqn ktsfpshsae pkkraphsiv pfasllgrsw
       61 vssashappp ivahgsgtke trgvpwsksm plkgspmaet agrfpsptsk rssrr
//
LOCUS       XP_016727317             181 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase AOP1 [Gossypium
            hirsutum].
ACCESSION   XP_016727317
VERSION     XP_016727317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871828.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     AOP1"
                     /calculated_mol_wt=20579
     Region          32..>171
                     /region_name="PLN02365"
                     /note="2-oxoglutarate-dependent dioxygenase"
                     /db_xref="CDD:177993"
     CDS             1..181
                     /gene="LOC107938609"
                     /coded_by="XM_016871828.2:664..1209"
                     /db_xref="GeneID:107938609"
ORIGIN      
        1 msvdakieft viefrsadle rgtngwhqlc kkvreacetf gcfevvydti stdvreemfm
       61 lmkelvevsv erkqkntspl pyhgwigpca qvsllykgfg igdvsnsdsv kdfaqlmwpe
      121 ghsrfcdtih tmgtqlevlh kliwlmlids yglgeeslkm nytmsmrmlk ymapppgese
      181 t
//
LOCUS       XP_016727321             952 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727321
VERSION     XP_016727321.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871832.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..952
                     /product="transcriptional corepressor LEUNIG isoform X1"
                     /calculated_mol_wt=104819
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          659..952
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(666,684,688,694..695,707..708,726,730,736..737,
                     750..751,769,774,780..781,794,813,817,823..824,837..838,
                     856,860,865..866,881..882,901,910..911,922..923,941,945,
                     951..952)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          670..707
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          713..750
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          755..792
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          800..835
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          842..880
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          888..921
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          927..951
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..952
                     /gene="LOC107938611"
                     /coded_by="XM_016871832.2:253..3111"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlwddkd lelqaemdrf vedgslddnv esflshddtd prdavgrcmd vtkgftfmev
      661 nsvrassskv tcchfssdgk llatgghdkk avlwytdtlk lkstleehsc litdvrfsps
      721 msrlatssfd ktvrvweads pgyslrtfgg hsgnvmsldf hptkddlics cdgdgeiryw
      781 sinngscara fkggtapgta qlrfqprlgk ylaaaaenvv sildtetqtc rhslqqghtk
      841 lihsvcwdps gellasvsed svrvwsfasg segecvhels cngnkfhscv fhpsfqsllv
      901 igcyqslelw nmsenktmtl sahegliaal avspvtrlvs sashdkfvkl wk
//
LOCUS       XP_016727322             952 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727322
VERSION     XP_016727322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..952
                     /product="transcriptional corepressor LEUNIG isoform X1"
                     /calculated_mol_wt=104819
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          659..952
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(666,684,688,694..695,707..708,726,730,736..737,
                     750..751,769,774,780..781,794,813,817,823..824,837..838,
                     856,860,865..866,881..882,901,910..911,922..923,941,945,
                     951..952)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          670..707
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          713..750
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          755..792
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          800..835
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          842..880
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          888..921
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          927..951
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..952
                     /gene="LOC107938611"
                     /coded_by="XM_016871833.2:242..3100"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlwddkd lelqaemdrf vedgslddnv esflshddtd prdavgrcmd vtkgftfmev
      661 nsvrassskv tcchfssdgk llatgghdkk avlwytdtlk lkstleehsc litdvrfsps
      721 msrlatssfd ktvrvweads pgyslrtfgg hsgnvmsldf hptkddlics cdgdgeiryw
      781 sinngscara fkggtapgta qlrfqprlgk ylaaaaenvv sildtetqtc rhslqqghtk
      841 lihsvcwdps gellasvsed svrvwsfasg segecvhels cngnkfhscv fhpsfqsllv
      901 igcyqslelw nmsenktmtl sahegliaal avspvtrlvs sashdkfvkl wk
//
LOCUS       XP_016727323             951 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727323
VERSION     XP_016727323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871834.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..951
                     /product="transcriptional corepressor LEUNIG isoform X2"
                     /calculated_mol_wt=104691
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          659..951
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(666,684,688,694..695,707..708,726,730,736..737,
                     750..751,769,774,780..781,794,813,817,823..824,836..837,
                     855,859,864..865,880..881,900,909..910,921..922,940,944,
                     950..951)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          670..707
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          713..750
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          755..792
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          800..835
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          841..879
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          887..920
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          926..950
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..951
                     /gene="LOC107938611"
                     /coded_by="XM_016871834.2:253..3108"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlwddkd lelqaemdrf vedgslddnv esflshddtd prdavgrcmd vtkgftfmev
      661 nsvrassskv tcchfssdgk llatgghdkk avlwytdtlk lkstleehsc litdvrfsps
      721 msrlatssfd ktvrvweads pgyslrtfgg hsgnvmsldf hptkddlics cdgdgeiryw
      781 sinngscara fkggtapgta qlrfqprlgk ylaaaaenvv sildtetqtc rhslqghtkl
      841 ihsvcwdpsg ellasvseds vrvwsfasgs egecvhelsc ngnkfhscvf hpsfqsllvi
      901 gcyqslelwn msenktmtls ahegliaala vspvtrlvss ashdkfvklw k
//
LOCUS       XP_016727324             947 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016727324
VERSION     XP_016727324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871835.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..947
                     /product="transcriptional corepressor LEUNIG isoform X3"
                     /calculated_mol_wt=104262
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          654..947
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(661,679,683,689..690,702..703,721,725,731..732,
                     745..746,764,769,775..776,789,808,812,818..819,832..833,
                     851,855,860..861,876..877,896,905..906,917..918,936,940,
                     946..947)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          665..702
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          708..745
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          750..787
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          795..830
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          837..875
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          883..916
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          922..946
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..947
                     /gene="LOC107938611"
                     /coded_by="XM_016871835.2:253..3096"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqngrkrkq pvsssgpans
      541 sgtantagps pssapstpst htpgdvismp amphsgsssk plmmfgaega gtlaspsnql
      601 wddkdlelqa emdrfvedgs lddnvesfls hddtdprdav grcmdvtkgf tfmevnsvra
      661 ssskvtcchf ssdgkllatg ghdkkavlwy tdtlklkstl eehsclitdv rfspsmsrla
      721 tssfdktvrv weadspgysl rtfgghsgnv msldfhptkd dlicscdgdg eirywsinng
      781 scarafkggt apgtaqlrfq prlgkylaaa aenvvsildt etqtcrhslq qghtklihsv
      841 cwdpsgella svsedsvrvw sfasgsegec vhelscngnk fhscvfhpsf qsllvigcyq
      901 slelwnmsen ktmtlsaheg liaalavspv trlvssashd kfvklwk
//
LOCUS       XP_040941658             946 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941658
VERSION     XP_040941658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085724.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..946
                     /product="transcriptional corepressor LEUNIG isoform X4"
                     /calculated_mol_wt=104134
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          654..946
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(661,679,683,689..690,702..703,721,725,731..732,
                     745..746,764,769,775..776,789,808,812,818..819,831..832,
                     850,854,859..860,875..876,895,904..905,916..917,935,939,
                     945..946)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          665..702
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          708..745
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          750..787
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          795..830
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          836..874
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          882..915
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          921..945
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..946
                     /gene="LOC107938611"
                     /coded_by="XM_041085724.1:253..3093"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqngrkrkq pvsssgpans
      541 sgtantagps pssapstpst htpgdvismp amphsgsssk plmmfgaega gtlaspsnql
      601 wddkdlelqa emdrfvedgs lddnvesfls hddtdprdav grcmdvtkgf tfmevnsvra
      661 ssskvtcchf ssdgkllatg ghdkkavlwy tdtlklkstl eehsclitdv rfspsmsrla
      721 tssfdktvrv weadspgysl rtfgghsgnv msldfhptkd dlicscdgdg eirywsinng
      781 scarafkggt apgtaqlrfq prlgkylaaa aenvvsildt etqtcrhslq ghtklihsvc
      841 wdpsgellas vsedsvrvws fasgsegecv helscngnkf hscvfhpsfq sllvigcyqs
      901 lelwnmsenk tmtlsahegl iaalavspvt rlvssashdk fvklwk
//
LOCUS       XP_016727325             946 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016727325
VERSION     XP_016727325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871836.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..946
                     /product="transcriptional corepressor LEUNIG isoform X5"
                     /calculated_mol_wt=104187
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          653..946
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(660,678,682,688..689,701..702,720,724,730..731,
                     744..745,763,768,774..775,788,807,811,817..818,831..832,
                     850,854,859..860,875..876,895,904..905,916..917,935,939,
                     945..946)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          664..701
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          707..744
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          749..786
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          794..829
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          836..874
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          882..915
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          921..945
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..946
                     /gene="LOC107938611"
                     /coded_by="XM_016871836.2:253..3093"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlwddkd lelqaemdrf vedgslddnv esflshddtd prdavgrcft fmevnsvras
      661 sskvtcchfs sdgkllatgg hdkkavlwyt dtlklkstle ehsclitdvr fspsmsrlat
      721 ssfdktvrvw eadspgyslr tfgghsgnvm sldfhptkdd licscdgdge irywsinngs
      781 carafkggta pgtaqlrfqp rlgkylaaaa envvsildte tqtcrhslqq ghtklihsvc
      841 wdpsgellas vsedsvrvws fasgsegecv helscngnkf hscvfhpsfq sllvigcyqs
      901 lelwnmsenk tmtlsahegl iaalavspvt rlvssashdk fvklwk
//
LOCUS       XP_040941659             945 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040941659
VERSION     XP_040941659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085725.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..945
                     /product="transcriptional corepressor LEUNIG isoform X6"
                     /calculated_mol_wt=104059
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          653..945
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(660,678,682,688..689,701..702,720,724,730..731,
                     744..745,763,768,774..775,788,807,811,817..818,830..831,
                     849,853,858..859,874..875,894,903..904,915..916,934,938,
                     944..945)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          664..701
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          707..744
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          749..786
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          794..829
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          835..873
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          881..914
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          920..944
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..945
                     /gene="LOC107938611"
                     /coded_by="XM_041085725.1:253..3090"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlwddkd lelqaemdrf vedgslddnv esflshddtd prdavgrcft fmevnsvras
      661 sskvtcchfs sdgkllatgg hdkkavlwyt dtlklkstle ehsclitdvr fspsmsrlat
      721 ssfdktvrvw eadspgyslr tfgghsgnvm sldfhptkdd licscdgdge irywsinngs
      781 carafkggta pgtaqlrfqp rlgkylaaaa envvsildte tqtcrhslqg htklihsvcw
      841 dpsgellasv sedsvrvwsf asgsegecvh elscngnkfh scvfhpsfqs llvigcyqsl
      901 elwnmsenkt mtlsahegli aalavspvtr lvssashdkf vklwk
//
LOCUS       XP_016727326             943 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X7 [Gossypium hirsutum].
ACCESSION   XP_016727326
VERSION     XP_016727326.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871837.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..943
                     /product="transcriptional corepressor LEUNIG isoform X7"
                     /calculated_mol_wt=103675
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          650..943
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(657,675,679,685..686,698..699,717,721,727..728,
                     741..742,760,765,771..772,785,804,808,814..815,828..829,
                     847,851,856..857,872..873,892,901..902,913..914,932,936,
                     942..943)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          661..698
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          704..741
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          746..783
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          791..826
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          833..871
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          879..912
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          918..942
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..943
                     /gene="LOC107938611"
                     /coded_by="XM_016871837.2:253..3084"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlaemdr fvedgslddn vesflshddt dprdavgrcm dvtkgftfme vnsvrasssk
      661 vtcchfssdg kllatgghdk kavlwytdtl klkstleehs clitdvrfsp smsrlatssf
      721 dktvrvwead spgyslrtfg ghsgnvmsld fhptkddlic scdgdgeiry wsinngscar
      781 afkggtapgt aqlrfqprlg kylaaaaenv vsildtetqt crhslqqght klihsvcwdp
      841 sgellasvse dsvrvwsfas gsegecvhel scngnkfhsc vfhpsfqsll vigcyqslel
      901 wnmsenktmt lsahegliaa lavspvtrlv ssashdkfvk lwk
//
LOCUS       XP_040941660             943 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040941660
VERSION     XP_040941660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085726.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..943
                     /product="transcriptional corepressor LEUNIG isoform X7"
                     /calculated_mol_wt=103675
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          650..943
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(657,675,679,685..686,698..699,717,721,727..728,
                     741..742,760,765,771..772,785,804,808,814..815,828..829,
                     847,851,856..857,872..873,892,901..902,913..914,932,936,
                     942..943)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          661..698
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          704..741
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          746..783
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          791..826
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          833..871
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          879..912
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          918..942
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..943
                     /gene="LOC107938611"
                     /coded_by="XM_041085726.1:242..3073"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlaemdr fvedgslddn vesflshddt dprdavgrcm dvtkgftfme vnsvrasssk
      661 vtcchfssdg kllatgghdk kavlwytdtl klkstleehs clitdvrfsp smsrlatssf
      721 dktvrvwead spgyslrtfg ghsgnvmsld fhptkddlic scdgdgeiry wsinngscar
      781 afkggtapgt aqlrfqprlg kylaaaaenv vsildtetqt crhslqqght klihsvcwdp
      841 sgellasvse dsvrvwsfas gsegecvhel scngnkfhsc vfhpsfqsll vigcyqslel
      901 wnmsenktmt lsahegliaa lavspvtrlv ssashdkfvk lwk
//
LOCUS       XP_016727327             942 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X8 [Gossypium hirsutum].
ACCESSION   XP_016727327
VERSION     XP_016727327.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871838.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..942
                     /product="transcriptional corepressor LEUNIG isoform X8"
                     /calculated_mol_wt=103547
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          650..942
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(657,675,679,685..686,698..699,717,721,727..728,
                     741..742,760,765,771..772,785,804,808,814..815,827..828,
                     846,850,855..856,871..872,891,900..901,912..913,931,935,
                     941..942)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          661..698
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          704..741
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          746..783
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          791..826
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          832..870
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          878..911
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          917..941
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..942
                     /gene="LOC107938611"
                     /coded_by="XM_016871838.2:253..3081"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlaemdr fvedgslddn vesflshddt dprdavgrcm dvtkgftfme vnsvrasssk
      661 vtcchfssdg kllatgghdk kavlwytdtl klkstleehs clitdvrfsp smsrlatssf
      721 dktvrvwead spgyslrtfg ghsgnvmsld fhptkddlic scdgdgeiry wsinngscar
      781 afkggtapgt aqlrfqprlg kylaaaaenv vsildtetqt crhslqghtk lihsvcwdps
      841 gellasvsed svrvwsfasg segecvhels cngnkfhscv fhpsfqsllv igcyqslelw
      901 nmsenktmtl sahegliaal avspvtrlvs sashdkfvkl wk
//
LOCUS       XP_040941661             942 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040941661
VERSION     XP_040941661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085727.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..942
                     /product="transcriptional corepressor LEUNIG isoform X8"
                     /calculated_mol_wt=103547
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          650..942
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(657,675,679,685..686,698..699,717,721,727..728,
                     741..742,760,765,771..772,785,804,808,814..815,827..828,
                     846,850,855..856,871..872,891,900..901,912..913,931,935,
                     941..942)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          661..698
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          704..741
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          746..783
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          791..826
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          832..870
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          878..911
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          917..941
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..942
                     /gene="LOC107938611"
                     /coded_by="XM_041085727.1:241..3069"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlaemdr fvedgslddn vesflshddt dprdavgrcm dvtkgftfme vnsvrasssk
      661 vtcchfssdg kllatgghdk kavlwytdtl klkstleehs clitdvrfsp smsrlatssf
      721 dktvrvwead spgyslrtfg ghsgnvmsld fhptkddlic scdgdgeiry wsinngscar
      781 afkggtapgt aqlrfqprlg kylaaaaenv vsildtetqt crhslqghtk lihsvcwdps
      841 gellasvsed svrvwsfasg segecvhels cngnkfhscv fhpsfqsllv igcyqslelw
      901 nmsenktmtl sahegliaal avspvtrlvs sashdkfvkl wk
//
LOCUS       XP_016727328             938 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X9 [Gossypium hirsutum].
ACCESSION   XP_016727328
VERSION     XP_016727328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871839.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..938
                     /product="transcriptional corepressor LEUNIG isoform X9"
                     /calculated_mol_wt=103119
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          645..938
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(652,670,674,680..681,693..694,712,716,722..723,
                     736..737,755,760,766..767,780,799,803,809..810,823..824,
                     842,846,851..852,867..868,887,896..897,908..909,927,931,
                     937..938)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          656..693
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          699..736
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          741..778
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          786..821
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          828..866
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          874..907
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          913..937
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..938
                     /gene="LOC107938611"
                     /coded_by="XM_016871839.2:253..3069"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqngrkrkq pvsssgpans
      541 sgtantagps pssapstpst htpgdvismp amphsgsssk plmmfgaega gtlaspsnql
      601 aemdrfvedg slddnvesfl shddtdprda vgrcmdvtkg ftfmevnsvr assskvtcch
      661 fssdgkllat gghdkkavlw ytdtlklkst leehsclitd vrfspsmsrl atssfdktvr
      721 vweadspgys lrtfgghsgn vmsldfhptk ddlicscdgd geirywsinn gscarafkgg
      781 tapgtaqlrf qprlgkylaa aaenvvsild tetqtcrhsl qqghtklihs vcwdpsgell
      841 asvsedsvrv wsfasgsege cvhelscngn kfhscvfhps fqsllvigcy qslelwnmse
      901 nktmtlsahe gliaalavsp vtrlvssash dkfvklwk
//
LOCUS       XP_040941662             938 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040941662
VERSION     XP_040941662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085728.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..938
                     /product="transcriptional corepressor LEUNIG isoform X9"
                     /calculated_mol_wt=103119
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          645..938
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(652,670,674,680..681,693..694,712,716,722..723,
                     736..737,755,760,766..767,780,799,803,809..810,823..824,
                     842,846,851..852,867..868,887,896..897,908..909,927,931,
                     937..938)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          656..693
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          699..736
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          741..778
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          786..821
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          828..866
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          874..907
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          913..937
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..938
                     /gene="LOC107938611"
                     /coded_by="XM_041085728.1:242..3058"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqngrkrkq pvsssgpans
      541 sgtantagps pssapstpst htpgdvismp amphsgsssk plmmfgaega gtlaspsnql
      601 aemdrfvedg slddnvesfl shddtdprda vgrcmdvtkg ftfmevnsvr assskvtcch
      661 fssdgkllat gghdkkavlw ytdtlklkst leehsclitd vrfspsmsrl atssfdktvr
      721 vweadspgys lrtfgghsgn vmsldfhptk ddlicscdgd geirywsinn gscarafkgg
      781 tapgtaqlrf qprlgkylaa aaenvvsild tetqtcrhsl qqghtklihs vcwdpsgell
      841 asvsedsvrv wsfasgsege cvhelscngn kfhscvfhps fqsllvigcy qslelwnmse
      901 nktmtlsahe gliaalavsp vtrlvssash dkfvklwk
//
LOCUS       XP_040941663             937 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X10 [Gossypium
            hirsutum].
ACCESSION   XP_040941663
VERSION     XP_040941663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085729.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..937
                     /product="transcriptional corepressor LEUNIG isoform X10"
                     /calculated_mol_wt=102991
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          645..937
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(652,670,674,680..681,693..694,712,716,722..723,
                     736..737,755,760,766..767,780,799,803,809..810,822..823,
                     841,845,850..851,866..867,886,895..896,907..908,926,930,
                     936..937)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          656..693
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          699..736
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          741..778
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          786..821
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          827..865
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          873..906
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          912..936
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..937
                     /gene="LOC107938611"
                     /coded_by="XM_041085729.1:242..3055"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqngrkrkq pvsssgpans
      541 sgtantagps pssapstpst htpgdvismp amphsgsssk plmmfgaega gtlaspsnql
      601 aemdrfvedg slddnvesfl shddtdprda vgrcmdvtkg ftfmevnsvr assskvtcch
      661 fssdgkllat gghdkkavlw ytdtlklkst leehsclitd vrfspsmsrl atssfdktvr
      721 vweadspgys lrtfgghsgn vmsldfhptk ddlicscdgd geirywsinn gscarafkgg
      781 tapgtaqlrf qprlgkylaa aaenvvsild tetqtcrhsl qghtklihsv cwdpsgella
      841 svsedsvrvw sfasgsegec vhelscngnk fhscvfhpsf qsllvigcyq slelwnmsen
      901 ktmtlsaheg liaalavspv trlvssashd kfvklwk
//
LOCUS       XP_016727330             937 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X11 [Gossypium
            hirsutum].
ACCESSION   XP_016727330
VERSION     XP_016727330.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871841.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..937
                     /product="transcriptional corepressor LEUNIG isoform X11"
                     /calculated_mol_wt=103044
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          644..937
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(651,669,673,679..680,692..693,711,715,721..722,
                     735..736,754,759,765..766,779,798,802,808..809,822..823,
                     841,845,850..851,866..867,886,895..896,907..908,926,930,
                     936..937)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          655..692
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          698..735
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          740..777
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          785..820
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          827..865
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          873..906
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          912..936
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..937
                     /gene="LOC107938611"
                     /coded_by="XM_016871841.2:253..3066"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlaemdr fvedgslddn vesflshddt dprdavgrcf tfmevnsvra ssskvtcchf
      661 ssdgkllatg ghdkkavlwy tdtlklkstl eehsclitdv rfspsmsrla tssfdktvrv
      721 weadspgysl rtfgghsgnv msldfhptkd dlicscdgdg eirywsinng scarafkggt
      781 apgtaqlrfq prlgkylaaa aenvvsildt etqtcrhslq qghtklihsv cwdpsgella
      841 svsedsvrvw sfasgsegec vhelscngnk fhscvfhpsf qsllvigcyq slelwnmsen
      901 ktmtlsaheg liaalavspv trlvssashd kfvklwk
//
LOCUS       XP_040941664             936 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X12 [Gossypium
            hirsutum].
ACCESSION   XP_040941664
VERSION     XP_040941664.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085730.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..936
                     /product="transcriptional corepressor LEUNIG isoform X12"
                     /calculated_mol_wt=102916
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          644..936
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(651,669,673,679..680,692..693,711,715,721..722,
                     735..736,754,759,765..766,779,798,802,808..809,821..822,
                     840,844,849..850,865..866,885,894..895,906..907,925,929,
                     935..936)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          655..692
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          698..735
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          740..777
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          785..820
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          826..864
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          872..905
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          911..935
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..936
                     /gene="LOC107938611"
                     /coded_by="XM_041085730.1:253..3063"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqpqh qhqqqqqqqq lqmqqlllqr
      121 haqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqpp
      181 qqsqqaqqpq qrrdgsqlln gntnglvgnd tlirqpagta namatkmyee rlklphqrds
      241 lddaamkqry gdnagqlldp nhasilkpaa atgppsgqvl hgttggmspq vqarsqqlpg
      301 ttpdiksemn pvlnpraagp dgslmgipgs nqggnnltlk gwpltgldql rggilqpqks
      361 fmqapqpfhq lqmltpqhqq lmlaqqnlts psgsddnrrl rmllnnnrtm glgkdglsns
      421 vgdvvpnvss lqagsplmpr gdtdilmklk laqlhqqqqq qqqlqqqqqq nsnsqqqqlq
      481 qhalsnqqsq ssnpslhqqd kvggggsvtv dgsmsnsfrg ndqvsknqng rkrkqpvsss
      541 gpanssgtan tagpspssap stpsthtpgd vismpamphs gssskplmmf gaegagtlas
      601 psnqlaemdr fvedgslddn vesflshddt dprdavgrcf tfmevnsvra ssskvtcchf
      661 ssdgkllatg ghdkkavlwy tdtlklkstl eehsclitdv rfspsmsrla tssfdktvrv
      721 weadspgysl rtfgghsgnv msldfhptkd dlicscdgdg eirywsinng scarafkggt
      781 apgtaqlrfq prlgkylaaa aenvvsildt etqtcrhslq ghtklihsvc wdpsgellas
      841 vsedsvrvws fasgsegecv helscngnkf hscvfhpsfq sllvigcyqs lelwnmsenk
      901 tmtlsahegl iaalavspvt rlvssashdk fvklwk
//
LOCUS       XP_040941665             908 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG isoform X13 [Gossypium
            hirsutum].
ACCESSION   XP_040941665
VERSION     XP_040941665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085731.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..908
                     /product="transcriptional corepressor LEUNIG isoform X13"
                     /calculated_mol_wt=99271
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          615..908
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(622,640,644,650..651,663..664,682,686,692..693,
                     706..707,725,730,736..737,750,769,773,779..780,793..794,
                     812,816,821..822,837..838,857,866..867,878..879,897,901,
                     907..908)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          626..663
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          669..706
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          711..748
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          756..791
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          798..836
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          844..877
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          883..907
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..908
                     /gene="LOC107938611"
                     /coded_by="XM_041085731.1:253..2979"
                     /db_xref="GeneID:107938611"
ORIGIN      
        1 msqtnweadk mldvyihdyl vkrdlkasaq afqaegkvss dpvaidapgg flfewwsvfw
       61 difiartnek hsevaasyie tqlikareqq qqqqqqqqqq qqqqqqqqqq qqqqqqqqqq
      121 qqqqqqqqqq qqqqppqqsq qaqqpqqrrd gsqllngntn glvgndtlir qpagtanama
      181 tkmyeerlkl phqrdsldda amkqrygdna gqlldpnhas ilkpaaatgp psgqvlhgtt
      241 ggmspqvqar sqqlpgttpd iksemnpvln praagpdgsl mgipgsnqgg nnltlkgwpl
      301 tgldqlrggi lqpqksfmqa pqpfhqlqml tpqhqqlmla qqnltspsgs ddnrrlrmll
      361 nnnrtmglgk dglsnsvgdv vpnvsslqag splmprgdtd ilmklklaql hqqqqqqqql
      421 qqqqqqnsns qqqqlqqhal snqqsqssnp slhqqdkvgg ggsvtvdgsm snsfrgndqv
      481 sknqngrkrk qpvsssgpan ssgtantagp spssapstps thtpgdvism pamphsgsss
      541 kplmmfgaeg agtlaspsnq lwddkdlelq aemdrfvedg slddnvesfl shddtdprda
      601 vgrcmdvtkg ftfmevnsvr assskvtcch fssdgkllat gghdkkavlw ytdtlklkst
      661 leehsclitd vrfspsmsrl atssfdktvr vweadspgys lrtfgghsgn vmsldfhptk
      721 ddlicscdgd geirywsinn gscarafkgg tapgtaqlrf qprlgkylaa aaenvvsild
      781 tetqtcrhsl qqghtklihs vcwdpsgell asvsedsvrv wsfasgsege cvhelscngn
      841 kfhscvfhps fqsllvigcy qslelwnmse nktmtlsahe gliaalavsp vtrlvssash
      901 dkfvklwk
//
LOCUS       XP_016727310             489 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHR3 [Gossypium hirsutum].
ACCESSION   XP_016727310
VERSION     XP_016727310.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871821.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..489
                     /product="histone-lysine N-methyltransferase ASHR3"
                     /calculated_mol_wt=55629
     Region          114..161
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(114,128..129,130,136,156)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <289..321
                     /region_name="AWS"
                     /note="associated with SET domains; smart00570"
                     /db_xref="CDD:197795"
     Region          322..460
                     /region_name="SET_ASHR3-like"
                     /note="SET domain (including post-SET domain) found in
                     Arabidopsis thaliana ASH1-related protein 3 (ASHR3) and
                     similar proteins; cd19175"
                     /db_xref="CDD:380952"
     Site            order(331..333,350,360,364,373..379,396..400,407..409,424,
                     435..442,444,446..450)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380952"
     Site            order(331..333,375..376,396..400,437,446..450)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380952"
     Site            order(350,360,364,375..379,407..409,424,435..439)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380952"
     Site            order(402,448,450,455)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380952"
     CDS             1..489
                     /gene="LOC107938600"
                     /coded_by="XM_016871821.2:94..1563"
                     /db_xref="GeneID:107938600"
ORIGIN      
        1 mpglgnlshs sslslspcpn lkllsvdsad sidafdsptl ktlpvnckwd qrlvpkrvnc
       61 ngngirvlkk vkkgsngkal qdylrdwvhr kmesglpksc yflpflvgak rlvecldchk
      121 liypgeevlc svrgcqgvyh ktcaeesfrm snpkkfqcpq hvcfvcrqrl qwrcvcctma
      181 shdkcspwpd avihlkdkpg raicwrhptn wrldkkhadp ateiqeifcq lplpymdeef
      241 kldltwrdli enklvpppyv hikrnvylvk kkrddvvddi gctscsstcs edcvcrvqci
      301 scskacrcpe sctnrpfske kkirivktel cgwgveaaep ikkgdfviey igeviddaqc
      361 ekrlwdmkhk gvknfymcei rkdftidatf kgntsrflnh scdpncvlek wqvegetrvg
      421 vfaarsikvg epltydyrfv qfgpevrchc gasncqgylg tkrkivkldl cwgskrrrts
      481 taclaiitv
//
LOCUS       XP_016727334             492 aa            linear   PLN 06-AUG-2024
DEFINITION  inosine-5'-monophosphate dehydrogenase 2 [Gossypium hirsutum].
ACCESSION   XP_016727334
VERSION     XP_016727334.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871845.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..492
                     /product="inosine-5'-monophosphate dehydrogenase 2"
                     /calculated_mol_wt=52192
     Region          2..492
                     /region_name="PLN02274"
                     /note="inosine-5'-monophosphate dehydrogenase"
                     /db_xref="CDD:215154"
     CDS             1..492
                     /gene="LOC107938614"
                     /coded_by="XM_016871845.2:204..1682"
                     /db_xref="GeneID:107938614"
ORIGIN      
        1 medgfpaskt fnqgysltyd dvillphyid fptdavslst slsrnvplsi pcvaspmdtv
       61 seahmaasma alggiaivhy nctssqqasi irsakalrvp itpsvsfasp vdglpayhgr
      121 yvfitesggl pskllgylss sdfenlkdkp vkifdykrdc ksveyvnwdc dlgkietlld
      181 ekdsdfvvle rdgeavnvvi kedverlkgy pklgagtvga dgewmvgaai gtresdkerl
      241 ehlvkaganv vvldssqgns iyqiemikfi kktypqldvi ggnvvtmaqa qnliqagvdg
      301 lrvgmgsgsi cttqevcavg rgqatavykv ssiaaqhgvp viadggisns ghivkalvlg
      361 astvmmgsfl agsteapgay eykngqrvkk yrgmgsleam tkgsdqrylg dtaklkiaqg
      421 vvgavtdkgs vlkfipytmq avkqgfqdlg asslpsahel lrsgtlrfev rtgaaqaegg
      481 vhglvsyekk sf
//
LOCUS       XP_016727320             803 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor [Gossypium hirsutum].
ACCESSION   XP_016727320
VERSION     XP_016727320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871831.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..803
                     /product="eukaryotic translation initiation factor"
                     /calculated_mol_wt=88146
     Region          222..447
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          639..751
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     CDS             1..803
                     /gene="LOC107938610"
                     /coded_by="XM_016871831.2:310..2721"
                     /db_xref="GeneID:107938610"
ORIGIN      
        1 mqqgdqtvls lrpgggrgnr lfggpsssss ssssssssla fgsfssdlpl frshggggas
       61 slkaadsrfe grecvrytrd qllqlreavk vadeilkikq dfevelfged kswsrgesnp
      121 snysqnryse pdnrdwfshs aqfplageer sreslrgrdl gnrfdsrqqe ankfnrqeqf
      181 npqfsraqns ssqgggstpa lvkaevpwsa krgnlsekdr vlksvkgiln kltpekydll
      241 egqlidsgit sadilkdvis lifekavlep tfcpmysllc sdlndklpsf psdepggkdi
      301 tfkrvllnnc qeafegadkl reevrlmtap eqemdrrdke rmaklrtlgn irligellkq
      361 kmvpekivhh ivqellghds racpaeenve aicqffntig kqldespksr rindtyfsrl
      421 kelttnpqla prlrfmvrdv ldlrankwvp rweevkakti teihseaekn lglrpgatas
      481 irnshvvpvg pvspgpggfp itrpgtgglm pgmpgmpgtr rmpgmpgmdn dnwevprgrs
      541 mprgdaqsmp vgrgqspsih kssmnprllp qgsgdlmsgr tsallqgsst ppawqsntsl
      601 gaepmaqpsv sakpvpvaav spivekspap aailnpddlq rkiralldey fivrlldeal
      661 lcveelksps hhpevvkeai sialdksppc vepvwklley lfskkvfaar diatgcllyg
      721 allddiaidl pkapnnfgei igrlilaggl dfkvvkeilk kmednfyqka vfdaatktis
      781 lnpsgqglld asaseveacq nlf
//
LOCUS       XP_016727315             373 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MULTIPOLAR SPINDLE 1 [Gossypium hirsutum].
ACCESSION   XP_016727315
VERSION     XP_016727315.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871826.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..373
                     /product="protein MULTIPOLAR SPINDLE 1"
                     /calculated_mol_wt=42475
     CDS             1..373
                     /gene="LOC107938605"
                     /coded_by="XM_016871826.2:31..1152"
                     /db_xref="GeneID:107938605"
ORIGIN      
        1 msssehqaps aatntlkeep lklaiaisll rskflqrhpp ppslsddtlk wkrkakerkq
       61 eilklkddlk eaeeasqcdl fpqtasckcy ffdnlgklsp nrlgdgsdrr fhdvlrrrfl
      121 rqvrlrerrk tcgssqkrra fgfsdedqae qlrasvdflv elcsssspvq eskfknwshq
      181 avdfilaalk nllsmgknle svegvvsrli mclvrqmssp srrdeahksd tnsqldiqhl
      241 lrklgcqsyi gqriilsisq risvlaesll fsdpfdetfp amhecmfvmi qlieflvsdy
      301 lltwstnedf ensvfeewvt sllqarksve vlesrnglyv qymdrvvgel sklmgqspal
      361 lklnsgifda lls
//
LOCUS       XP_016727338             931 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 4 [Gossypium hirsutum].
ACCESSION   XP_016727338
VERSION     XP_016727338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871849.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..931
                     /product="protein tesmin/TSO1-like CXC 4"
                     /calculated_mol_wt=101110
     Region          522..559
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          610..645
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..931
                     /gene="LOC107938620"
                     /coded_by="XM_016871849.2:223..3018"
                     /db_xref="GeneID:107938620"
ORIGIN      
        1 mdspeptksp ipssaapsss fspvqespfs nfvsnlspik hdkvphvapr flglsspplv
       61 ftsprintlk rpqssnvevs qnvkgdeqst nrsgdlersv selhremivd ikeddtkdsm
      121 svqpssssgc vdeyladpve adcvdsaysv nlnlkqsnnv pessanglpc sknlesvdkh
      181 ysgreadavq llsrqsekgl etfdieplri kedqhggqgi sdgcqqidsd mfdlssqeqg
      241 sknlnpqkgv eddgygcdgf lqlqpgslqm vqayegfaen vggvtdapfy dtthdleaie
      301 hlrgmsrrcl qfgepqpest ancsgssnlv ndvitsvpla tsskteslgs shvdsstsrk
      361 rrlvnlsqla vnmipqsydn rssltvskps giglhlnsif naiptdqggt vsmklavdtm
      421 gtegiksasi tscqsmenme ncsdafekvs tapqdrtlea kvstiegsaa seslctmesi
      481 echmtvnkkr klssgdgdin evfnqqspkn krkklsdsde gckrcnckks kcvklycdcf
      541 aagiycaepc scqgcfnrpe yestvletrq qiesrnplaf apkivqpvte vpvnsredgn
      601 wktpssarhk rgcnckrsmc lkkycecyqa nvgcsigcrc egcknvygkk edyyvteaiv
      661 krgvgelses tvaakkdflh selcnphylt pttpsfehsd pgknasasgl lpmrclpspe
      721 sdptnvslak sprtsntndm lletskenly vgshrdkiny nnadniladd chqtplpnhp
      781 siiidssssk preltnlsrl nlgprsgcft lggslrwrss pitpkspidk elqqldsdgg
      841 lydileddtp emlkdtstpl ksvkasspng krvspphklh qlgssssgsl rsgrkfmlka
      901 vpsfppltpc ivskgnsnes rsnyeedgsk d
//
LOCUS       XP_016727308             122 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b-c1 complex subunit 7-2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016727308
VERSION     XP_016727308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871819.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..122
                     /product="cytochrome b-c1 complex subunit 7-2,
                     mitochondrial"
                     /calculated_mol_wt=14417
     Region          4..109
                     /region_name="UCR_14kD"
                     /note="Ubiquinol-cytochrome C reductase complex 14kD
                     subunit; pfam02271"
                     /db_xref="CDD:460519"
     CDS             1..122
                     /gene="LOC107938599"
                     /coded_by="XM_016871819.2:151..519"
                     /db_xref="GeneID:107938599"
ORIGIN      
        1 mssflqslld pkkswlaslh mkalttrlrk yglryddlyd pyydldikea lnrlpreivd
       61 arnqrlkram dlsmkheylp edlqkmqtpf rsylqdmlal vkkeraerea lgalplyqrt
      121 ip
//
LOCUS       XP_016727331             489 aa            linear   PLN 06-AUG-2024
DEFINITION  PH and SEC7 domain-containing protein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727331
VERSION     XP_016727331.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871842.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..489
                     /product="PH and SEC7 domain-containing protein isoform
                     X1"
                     /calculated_mol_wt=54055
     CDS             1..489
                     /gene="LOC107938613"
                     /coded_by="XM_016871842.2:95..1564"
                     /db_xref="GeneID:107938613"
ORIGIN      
        1 mrgtigrtfs nptnhyltsl tkrtsflfqs sspfsassss gdgrgrgrgr egaspsgafg
       61 gftpalgkpd sedtkrdsae sqavgsghgr grgiplssep iipsfssfvs qngsgrgrvt
      121 nesvrpippp ppppppreak qpifvmkqde ietdlsaklp aesvqssert fsprtpsvas
      181 lsgagrgkpv kqpgpvlqtk eenrhirlkq qqqqqqqqqq qqqqppsprl skeeavkkam
      241 gilsrksesd eredmgrsgg rgrgrgrgrg aqmgrgrgrr eredtgeeee adkelrdely
      301 lgnnadgerl aetigadsmn klvegfeeis srvlpspmdd aylealhtnf miefepeylm
      361 eefgtnpdid ekppmslrda lekvkpflms yegienqeew eeaiketmdk vpllqeiidy
      421 ysgpdrvtak kqqeelerva ktipksapas vkqfanravl tlqsnpgwgf dkkcqfmdkl
      481 vwevsqqyk
//
LOCUS       XP_016727333             464 aa            linear   PLN 06-AUG-2024
DEFINITION  PH and SEC7 domain-containing protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016727333
VERSION     XP_016727333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871844.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..464
                     /product="PH and SEC7 domain-containing protein isoform
                     X2"
                     /calculated_mol_wt=51023
     CDS             1..464
                     /gene="LOC107938613"
                     /coded_by="XM_016871844.2:95..1489"
                     /db_xref="GeneID:107938613"
ORIGIN      
        1 mrgtigrtfs nptnhyltsl tkrtsflfqs sspfsassss gdgrgrgrgr egaspsgafg
       61 gftpalgkpd sedtkrdsae sqavgsghgr grgiplssep iipsfssfvs qngsgrgrvt
      121 nesvrpippp ppppppreak qpifvmkqde ietdlsaklp aesvqssert fsprtpsvas
      181 lsgagrgkpv kqpgpvlqtk eenrhirlkq qqqqqqqqqq qqqqppsprl skeeavkkam
      241 gilsrksesd eredmgrsgg rgrgrgrgrg aqmgrgrgrr eredtgeeee adkelrdely
      301 lgnnadgerl aetigadsmn klvegfeeis srvlpspmdd aylealhtnf miefepeylm
      361 eefgtnpdid ekppmslrda lekvkpflms yegienqeew eeaiketmdk vpllqeiidy
      421 ysgpdrvtak kqqeelerva ktipksapas vkqfanravl tlqv
//
LOCUS       XP_016727314             426 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 35 [Gossypium hirsutum].
ACCESSION   XP_016727314
VERSION     XP_016727314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871825.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..426
                     /product="U-box domain-containing protein 35"
                     /calculated_mol_wt=47942
     Region          17..156
                     /region_name="USP_STK_Ubox_N"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; cd01989"
                     /db_xref="CDD:467493"
     CDS             1..426
                     /gene="LOC107938604"
                     /coded_by="XM_016871825.2:353..1633"
                     /db_xref="GeneID:107938604"
ORIGIN      
        1 msqyvrgenp erkdrlvavg vdkdkyslqa lhwavdnflt rgqtlrlvhv lqkpinplqd
       61 esnvggerqv dnqnldlflp lrslcarkqi qcetvvledt dvakalvgyv nqygietlfv
      121 gavsktgisr lfkgtdtpss ilklapdfcn vyviakrkva aarlasrpap graqslnsed
      181 dsiiendglf yddevsaldm nsssgagsdg lnsslyqnlg tslrsppvmd pfrrsfavpv
      241 tsspaldlpa frtgqkhhsi pttlseyssl leyespsspe sapedndetr rlrielkqtm
      301 dmyhaackea laakqqviql kewkrrveek rkkggtlsst rktritrtrv dvddestqel
      361 velevqkrve eelqkalcea eerrklmvvd dlghshlvvk yqslfhilvv iflfyfyfti
      421 yvyfti
//
LOCUS       XP_040941666             764 aa            linear   PLN 06-AUG-2024
DEFINITION  cycloartenol synthase [Gossypium hirsutum].
ACCESSION   XP_040941666
VERSION     XP_040941666.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085732.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..764
                     /product="cycloartenol synthase"
                     /calculated_mol_wt=86584
     Region          1..754
                     /region_name="PLN03012"
                     /note="Camelliol C synthase"
                     /db_xref="CDD:166653"
     CDS             1..764
                     /gene="LOC107938607"
                     /coded_by="XM_041085732.1:46..2340"
                     /db_xref="GeneID:107938607"
ORIGIN      
        1 mwklkvsqgd dehglkssnq higrqywefd pnlgtpqdra rvelarnhft snrfrakqss
       61 dllmrfqfar enssigyetk vplakvnnss gteetvkmal rkalgfystl qshdgfwpad
      121 yggplfllpg lviglfvtga ldiilpsqhr qeirrylynh qnedggwgih iegdstmfgt
      181 alsyvtlrll getkdggnga ienarnwiln hggltfipsw gkmwfsvlgi yewsgnnpll
      241 pelwllpyrl npihpgrmwc hsrmvylpms ylyatkfvgp itslilslrr elyplpyhlv
      301 dwdcarylca kedlyyphpi iqdvlwecle kvvepalkkw plsklrkkal htvmqhihye
      361 destnyicig pvskilnmvc cwvedpksea fkchlsrikd ylwvaedgmk mqgyngsqlw
      421 dvafsvqaim atnlveeygs mlkkahsfik ntqvkensgn glnlwyrhis kggwpfstpd
      481 ngwivsdcta eglkaallls tmpsyivgee vitpdrlyea vnvilslqnn sggfasyelt
      541 rsyawlemln paelfgdiii dyqyvectsa aiqglklfqk lhpnyknkei qaciskainf
      601 iesiqlpdgs wygswgvcfv ygtwfgikgl vaggrnyhnc esirkacdfl lskqipsggw
      661 gesylssqnk vytnlegnkc hlvttawaml aliesgqadr dptplhsaak vllnsqldng
      721 dfpqqeiigv fnkncmisys syrnifpiwa lgeylncvll aksk
//
LOCUS       XP_016727337             440 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL17 [Gossypium
            hirsutum].
ACCESSION   XP_016727337
VERSION     XP_016727337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871848.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..440
                     /product="probable serine/threonine-protein kinase PBL17"
                     /calculated_mol_wt=49019
     Region          86..358
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(86..90,94,113,115,144,160..163,167,169,210,212,
                     214..215,217,228,231,249..252)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(86..90,94,113,115,144,160..163,167,210,212,214..215,
                     217,228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(90,167,169,210,212,214,231,249..252)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(227..234,245..252)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..440
                     /gene="LOC107938618"
                     /coded_by="XM_016871848.2:356..1678"
                     /db_xref="GeneID:107938618"
ORIGIN      
        1 mgtcfsieee pdrslsnppd gghktsassr nqemanspit ktpsfialta kdvkdlrqnp
       61 gysnvdifsy qemrlatkqf rpdyilgdgg fgvvykgvid envrpaykst avavkelnpd
      121 gfqgdrewla evnylgqlsh pnlvkligyc cedehrllvy eymasgslek hlfrrvgcsl
      181 twskrmkial daakglaflh daerpiiyrd fktsnillde dfnaklsdfg lakegpmgdk
      241 thvstrvmgt ygyaapeyvm tghltarsdv ygfgvvllem llgrramdks rpsrehnlve
      301 warpllirnk klmrildprm egqysartam kvanlayqcl spnpkgrpvm nqvvelletf
      361 qtkardeetm insggsgitl yeapskssph sgnparsesh retsaaqgsk lenersksel
      421 pkevdlydpp sfeaeeptkg
//
LOCUS       XP_040941667             187 aa            linear   PLN 06-AUG-2024
DEFINITION  tetraspanin-8 [Gossypium hirsutum].
ACCESSION   XP_040941667
VERSION     XP_040941667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085733.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..187
                     /product="tetraspanin-8"
                     /calculated_mol_wt=20711
     CDS             1..187
                     /gene="LOC121212614"
                     /coded_by="XM_041085733.1:294..857"
                     /db_xref="GeneID:121212614"
ORIGIN      
        1 mmfaiivgii fsmitmiats kgaekvktre gykeyrlpdd pswlamailk enswesiksc
       61 ltvpehnvct dlkerqinst ateldqnelt piqsgcckpp secgfvyggm ttwtknnggs
      121 sknndcnlwn nddktlcfec qsckagfiyg vkdarrkssv vnivfcifii ifyfisical
      181 gnsakhg
//
LOCUS       XP_040941668             627 aa            linear   PLN 06-AUG-2024
DEFINITION  very-long-chain aldehyde decarbonylase CER3 [Gossypium hirsutum].
ACCESSION   XP_040941668
VERSION     XP_040941668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085734.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..627
                     /product="very-long-chain aldehyde decarbonylase CER3"
                     /calculated_mol_wt=71731
     Region          5..622
                     /region_name="PLN02869"
                     /note="fatty aldehyde decarbonylase"
                     /db_xref="CDD:166510"
     CDS             1..627
                     /gene="LOC121212615"
                     /coded_by="XM_041085734.1:279..2162"
                     /db_xref="GeneID:121212615"
ORIGIN      
        1 mvaplsawpw ehlgifkyil ygplaakawy swmyednilk dlwcihilli ctlrgfihql
       61 wssynnmffl trnrwikqqg vdfkqiddew dwdnfiilqa mlasmaclif pslntlplwn
      121 lkgfiaslll hvtiseplyy wahrlfhkpy lfihyhslhh sspvphpfta ghatplehlv
      181 lctvigipit gsilmgygst amiyghvlvf dffrclghsn aevvphevfn klpllryfiy
      241 tptyhslhht emetnfclfm plfdalgntl ntksfelhkr itsnsgkngr vpdfvflahv
      301 vdimsamhtp falrsfastp fcmrmfllpf wpltfmimlv mwgwsktflv sfynlrgrlh
      361 qtwvvprfgf qyflpfatkg inkhieeail radrlgvkvi slaalnknea lngggtlfvn
      421 khpelkvrvv hgntltaavi lnefskdvke vfltgatskl gratalylcr krvrvlmlts
      481 sterfqkilk eapvdcqnyl vqvtkyqaaq ncktwivgkw itpweqswap sgthfhqfvv
      541 ppilpirrdc tygdlaamrl ppdveglgsc eytmergvvh achaggvvhq legwshhevg
      601 aidvdridlv weaalklglk pvssvnn
//
LOCUS       XP_040941669             190 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941669
VERSION     XP_040941669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085735.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..190
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=21439
     CDS             1..190
                     /gene="LOC121202898"
                     /coded_by="XM_041085735.1:66..638"
                     /db_xref="GeneID:121202898"
ORIGIN      
        1 mekskrvslg vqkntkqskk kklltnvfny lksdnymfap lispsisagp klkepikgnk
       61 kkvlkmvdky mkydtymyap llssqllgsl sseqiqcisk vtvevattkt klntesanal
      121 aeeeqphedt rptdnqtiaq getvkhmvyh hrcstpmsgv tflkplptlf ffasicyiii
      181 clqekqwqii
//
LOCUS       XP_040941670             174 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941670
VERSION     XP_040941670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085736.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..174
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19449
     CDS             1..174
                     /gene="LOC121202898"
                     /coded_by="XM_041085736.1:43..567"
                     /db_xref="GeneID:121202898"
ORIGIN      
        1 mekskrvslg vqkntkqskk kklltnvfny lksdnymfap lispsisagp klkepikgnk
       61 kkvlkmvdky mkydtymyap llssqllgsl sseqiqcisk vtvevattkt klntesanal
      121 aeeeqphedt rptdnqtiaq getvkhmvyh hrcstpmsgk amadhmkvrk lave
//
LOCUS       XP_040941671             146 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941671
VERSION     XP_040941671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085737.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..146
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=16464
     CDS             1..146
                     /gene="LOC121202898"
                     /coded_by="XM_041085737.1:52..492"
                     /db_xref="GeneID:121202898"
ORIGIN      
        1 mekskrvslg vqkntkqskk kklltnvfny lksdnymfap lispsisaeq iqciskvtve
       61 vattktklnt esanalaeee qphedtrptd nqtiaqgetv khmvyhhrcs tpmsgvtflk
      121 plptlfffas icyiiiclqe kqwqii
//
LOCUS       XP_016725541             424 aa            linear   PLN 06-AUG-2024
DEFINITION  ethanolamine-phosphate cytidylyltransferase [Gossypium hirsutum].
ACCESSION   XP_016725541
VERSION     XP_016725541.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870052.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725541.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..424
                     /product="ethanolamine-phosphate cytidylyltransferase"
                     /calculated_mol_wt=47303
     Region          10..424
                     /region_name="PLN02406"
                     /note="ethanolamine-phosphate cytidylyltransferase"
                     /db_xref="CDD:215227"
     CDS             1..424
                     /gene="LOC107937196"
                     /coded_by="XM_016870052.2:216..1490"
                     /db_xref="GeneID:107937196"
ORIGIN      
        1 mameyesnnw iwewmyntph lfgglmltaa llgfstsyfg gignfpvsya wsnlgfllkk
       61 krdkrrvrvy mdgcfdlmhy ghanalrqak algdelvvgv vsdeeiiank gppilsmeer
      121 lalvsglkwv dqvianapya iteefmnslf nehkidyvih gddpcllpdg sdayalakia
      181 grykqikrte gvsstdivgr ilssvndnkg vgdnnstlsr vdsgrrrqlq rgqlsqflpt
      241 srrivqfsng kgpgpnariv yidgafdlfh aghveilkka rqlgdfllvg iypdyivseq
      301 rgmpypvmhl lertlsvlac ryvdeviiga pwevtkdmit tfnislvvhg tvaesnsslp
      361 getdpyaipk smgifrlles pksittssva qrivtnhevy mkrnakklqs ekkyyeekay
      421 vagd
//
LOCUS       XP_040941672             424 aa            linear   PLN 06-AUG-2024
DEFINITION  ethanolamine-phosphate cytidylyltransferase [Gossypium hirsutum].
ACCESSION   XP_040941672
VERSION     XP_040941672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085738.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..424
                     /product="ethanolamine-phosphate cytidylyltransferase"
                     /calculated_mol_wt=47303
     Region          10..424
                     /region_name="PLN02406"
                     /note="ethanolamine-phosphate cytidylyltransferase"
                     /db_xref="CDD:215227"
     CDS             1..424
                     /gene="LOC107937196"
                     /coded_by="XM_041085738.1:110..1384"
                     /db_xref="GeneID:107937196"
ORIGIN      
        1 mameyesnnw iwewmyntph lfgglmltaa llgfstsyfg gignfpvsya wsnlgfllkk
       61 krdkrrvrvy mdgcfdlmhy ghanalrqak algdelvvgv vsdeeiiank gppilsmeer
      121 lalvsglkwv dqvianapya iteefmnslf nehkidyvih gddpcllpdg sdayalakia
      181 grykqikrte gvsstdivgr ilssvndnkg vgdnnstlsr vdsgrrrqlq rgqlsqflpt
      241 srrivqfsng kgpgpnariv yidgafdlfh aghveilkka rqlgdfllvg iypdyivseq
      301 rgmpypvmhl lertlsvlac ryvdeviiga pwevtkdmit tfnislvvhg tvaesnsslp
      361 getdpyaipk smgifrlles pksittssva qrivtnhevy mkrnakklqs ekkyyeekay
      421 vagd
//
LOCUS       XP_040941673             330 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL43 [Gossypium hirsutum].
ACCESSION   XP_040941673
VERSION     XP_040941673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085739.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..330
                     /product="RING-H2 finger protein ATL43"
                     /calculated_mol_wt=36517
     Region          145..188
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            173..178
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..330
                     /gene="LOC121203563"
                     /coded_by="XM_041085739.1:558..1550"
                     /db_xref="GeneID:121203563"
ORIGIN      
        1 mglsypslpf flpilffipl lfadnytnyy ntnnnnngnt nfstnplpsp sqtrpnsssp
       61 fkpstavvaf vailttlfai ifllllyskh cggnndnsny nttnpfsyss slvttgrnsg
      121 inrvvveslp lfrfsslsgh knglecavcl trfepdellr llpkckhafh aecvdtwlda
      181 hstcplcryr vdpedillis dqdpttiasa sssnrfepte sdrtrrvsgr hsyaagerta
      241 aatvgsyrkd gmllkrmehr iivsgtgtgs gyqqrwsdvq psdllylrse miisqsrrlr
      301 iggalvaetg nddnnkngng kseeercrsr
//
LOCUS       XP_040941674             833 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TRANSPARENT TESTA 9 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941674
VERSION     XP_040941674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085740.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..833
                     /product="protein TRANSPARENT TESTA 9 isoform X1"
                     /calculated_mol_wt=93767
     Region          42..192
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     CDS             1..833
                     /gene="LOC107937193"
                     /coded_by="XM_041085740.1:312..2813"
                     /db_xref="GeneID:107937193"
ORIGIN      
        1 mwfsfwrsrd rfsldelryl tnqlqkvqiv ndvnkdfvie alrsiaellt ygdqhdssff
       61 effmekqvmg efvrilnisr tvtvslqllq tisiliqnlr rehaiyymfs nehvnylity
      121 sfdfrneell syyisflrai sgklnkntis llvktqdeev vsfplyveai rfafheesmv
      181 rtavraitln vyhvgdefvn kfiasapqsd yfsnlvsffr dqcinlsklf serpknpcse
      241 svsailakvd eiednlyyfs dvisagipvv gslitdnilq llilpllfpa lqidadsnlk
      301 igavtslyll ccilrivkik dlantmaaal lypletfaan sevkingyvs gnnctnesee
      361 plvdsvtlvn agklcvdipn katssqvhpg giiaerdfsc shlslretll syvtdgddar
      421 algslsvlat llqtkeldes mldgigilpq rkqhkklllq alvgegsgde qlfsfesgsa
      481 rdsfsseldg ylkklkeqyg vfiggaaasp rihrnqvlda lvkllcrsdi steilwdggw
      541 llrqllpyse aefkshhlkl lkdsyrncrs alvqetkgiw vdllitvlcd qwkkckraie
      601 assprkepkc illpfqklns edipaessft agermselvk vfvllhqlqi fslgralteq
      661 ppiqpqidip eisraraagl dvsgpkpgte vkfvhalpcr iafergkerh fhflavsvgt
      721 lgwvllaeel plkqnygivr vaaplagtnp riddkharwl hlrirpstlp fldapksgtp
      781 getrikslvd grwtlafrdd escktalsmi leeinlqnme verrlkpvld lel
//
LOCUS       XP_040941675             701 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TRANSPARENT TESTA 9 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941675
VERSION     XP_040941675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085741.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..701
                     /product="protein TRANSPARENT TESTA 9 isoform X2"
                     /calculated_mol_wt=78816
     Region          42..192
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     CDS             1..701
                     /gene="LOC107937193"
                     /coded_by="XM_041085741.1:312..2417"
                     /db_xref="GeneID:107937193"
ORIGIN      
        1 mwfsfwrsrd rfsldelryl tnqlqkvqiv ndvnkdfvie alrsiaellt ygdqhdssff
       61 effmekqvmg efvrilnisr tvtvslqllq tisiliqnlr rehaiyymfs nehvnylity
      121 sfdfrneell syyisflrai sgklnkntis llvktqdeev vsfplyveai rfafheesmv
      181 rtavraitln vyhvgdefvn kfiasapqsd yfsnlvsffr dqcinlsklf serpknpcse
      241 svsailakvd eiednlyyfs dvisagipvv gslitdnilq llilpllfpa lqidadsnlk
      301 igavtslyll ccilrivkik dlantmaaal lypletfaan sevkingyvs gnnctnesee
      361 plvdsvtlvn agklcvdipn katssqvhpg giiaerdfsc shlslretll syvtdgddar
      421 algslsvlat llqtkeldes mldgigilpq rkqhkklllq alvgegsgde qlfsfesgsa
      481 rdsfsseldg ylkklkeqyg vfiggaaasp rihrnqvlda lvkllcrsdi steilwdggw
      541 llrqllpyse aefkshhlkl lkdsyrncrs alvqetkgiw vdllitvlcd qwkkckraie
      601 assprkepkc illpfqklns edipaessft agermselvk vfvllhqlqi fslgralteq
      661 ppiqpqidip eisraraagl dvsgpkpgte vkfenwslvs n
//
LOCUS       XP_040941676             922 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SMAX1-LIKE 4 [Gossypium hirsutum].
ACCESSION   XP_040941676
VERSION     XP_040941676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085742.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..922
                     /product="protein SMAX1-LIKE 4"
                     /calculated_mol_wt=102918
     Region          12..>169
                     /region_name="ClpA"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; COG0542"
                     /db_xref="CDD:440308"
     Region          600..734
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(630..632,651,653..654,682..683)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     CDS             1..922
                     /gene="LOC107937197"
                     /coded_by="XM_041085742.1:619..3387"
                     /db_xref="GeneID:107937197"
ORIGIN      
        1 mrsgactvqq tltaeaasil khslslarrr ghaqvtplhv aatllstras llrraclksq
       61 qpqlssshpl qcralelcfn valnrlpttp gpilhgqpsl snalvaalkr aqahqrrgci
      121 eqqqsqqpil tikveleqli isilddpsvs rvmreagfss tvvkanieds ssspssvfqc
      181 ynttsgsggv fsspcspsqt hflsyeqnpf ffspskkllt syipdsaslk qdiklvfevl
      241 lrknkrrnsv ivgdcvstte slvseltsrv ekgdvpdemk hvrflkfyfs pmslkfmkre
      301 dvekhvcdlk rrvdsivaeg gaiiytgdlk wtvveegein gynaadhlvt elgrlisdyy
      361 msnkvwlvat asyqtylrcq mrqpplevqw alqavsvptg glslslhass chdtkmlfse
      421 mekkqfehek ltccaecssn yekdvqsfks sgglppwihv hgrnnsdsqk gemvelrrkw
      481 ntlchslhrg rlnqsqlrst myynnqgypy gssfpwwpsq ssgltdsasi sfidskpnsv
      541 prfrrqnsct ielnfgnvsp nldslknted kevkvtlalg sdsprkstgl cellqgnlpw
      601 qseiissiae almgskketw lliegtdmig krrlarvvae yvlgspdlll ymdmkhnnet
      661 trcnerlkra fsrdeklvvm venvdladtq clklladrfe ggddggssrs iiiltksiss
      721 sfeehyakkd niviemklni ngsdtnkrkh ewggsnktkt prtkpsshil dlnmkaaddd
      781 eeeeanesge vsdltadlhv gfleliqkry flnqtegqhk emkeafmakf krvveeifgg
      841 enkvsfsiee rvlegvlvgs syfvnslfek wlkdifqtgl qnvkkngggg gideirlsyg
      901 gilkkameng ymgsclpkni qv
//
LOCUS       XP_040941677             167 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941677
VERSION     XP_040941677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085743.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..167
                     /product="glycosyltransferase-like KOBITO 1 isoform X1"
                     /calculated_mol_wt=19207
     CDS             1..167
                     /gene="LOC107953246"
                     /coded_by="XM_041085743.1:284..787"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle sipafiiast akrksyfigi nlkavffsff
       61 pwmrcfiapf csiqmygcad vklqtsgfcr yrehvvwgdk dlrlkllrkg iltrkytpmk
      121 nydhlpketh fglyreatrg npnyfltygn ekeaarvqde lcpngah
//
LOCUS       XP_040941678             167 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941678
VERSION     XP_040941678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085744.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..167
                     /product="glycosyltransferase-like KOBITO 1 isoform X1"
                     /calculated_mol_wt=19207
     CDS             1..167
                     /gene="LOC107953246"
                     /coded_by="XM_041085744.1:389..892"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle sipafiiast akrksyfigi nlkavffsff
       61 pwmrcfiapf csiqmygcad vklqtsgfcr yrehvvwgdk dlrlkllrkg iltrkytpmk
      121 nydhlpketh fglyreatrg npnyfltygn ekeaarvqde lcpngah
//
LOCUS       XP_040941679             167 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941679
VERSION     XP_040941679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085745.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..167
                     /product="glycosyltransferase-like KOBITO 1 isoform X1"
                     /calculated_mol_wt=19207
     CDS             1..167
                     /gene="LOC107953246"
                     /coded_by="XM_041085745.1:290..793"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle sipafiiast akrksyfigi nlkavffsff
       61 pwmrcfiapf csiqmygcad vklqtsgfcr yrehvvwgdk dlrlkllrkg iltrkytpmk
      121 nydhlpketh fglyreatrg npnyfltygn ekeaarvqde lcpngah
//
LOCUS       XP_040941680             167 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941680
VERSION     XP_040941680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085746.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..167
                     /product="glycosyltransferase-like KOBITO 1 isoform X1"
                     /calculated_mol_wt=19207
     CDS             1..167
                     /gene="LOC107953246"
                     /coded_by="XM_041085746.1:251..754"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle sipafiiast akrksyfigi nlkavffsff
       61 pwmrcfiapf csiqmygcad vklqtsgfcr yrehvvwgdk dlrlkllrkg iltrkytpmk
      121 nydhlpketh fglyreatrg npnyfltygn ekeaarvqde lcpngah
//
LOCUS       XP_040941681             166 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941681
VERSION     XP_040941681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085747.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..166
                     /product="glycosyltransferase-like KOBITO 1 isoform X2"
                     /calculated_mol_wt=19079
     CDS             1..166
                     /gene="LOC107953246"
                     /coded_by="XM_041085747.1:833..1333"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle sipafiiast akrksyfigi nlkavffsff
       61 pwmrcfiapf csiqmygcad vklqtsgfcr yrehvvwgdk dlrlkllrkg iltrkytpmn
      121 ydhlpkethf glyreatrgn pnyfltygne keaarvqdel cpngah
//
LOCUS       XP_040941682             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941682
VERSION     XP_040941682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085748.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..162
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=19089
     CDS             1..162
                     /gene="LOC107953246"
                     /coded_by="XM_041085748.1:97..585"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mifqntvkse pflrkmsykf ligktfsgns sshltirslf vlrfsktify hgcfiirlle
       61 sqpftslskd mqhlpmfpef wnlflyrehv vwgdkdlrlk llrkgiltrk ytpmknydhl
      121 pkethfglyr eatrgnpnyf ltygnekeaa rvqdelcpng ah
//
LOCUS       XP_040941683             161 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941683
VERSION     XP_040941683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085749.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..161
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=18961
     CDS             1..161
                     /gene="LOC107953246"
                     /coded_by="XM_041085749.1:93..578"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mifqntvkse pflrkmsykf ligktfsgns sshltirslf vlrfsktify hgcfiirlle
       61 sqpftslskd mqhlpmfpef wnlflyrehv vwgdkdlrlk llrkgiltrk ytpmnydhlp
      121 kethfglyre atrgnpnyfl tygnekeaar vqdelcpnga h
//
LOCUS       XP_040941684             153 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like At3g57200 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941684
VERSION     XP_040941684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085750.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="glycosyltransferase-like At3g57200 isoform X5"
                     /calculated_mol_wt=17970
     CDS             1..153
                     /gene="LOC107953246"
                     /coded_by="XM_041085750.1:98..559"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mifqntvkse pflrkmsykf ligktfsgns sshltirslf vlrfsktmll esqpftslsk
       61 dmqhlpmfpe fwnlflyreh vvwgdkdlrl kllrkgiltr kytpmknydh lpkethfgly
      121 reatrgnpny fltygnekea arvqdelcpn gah
//
LOCUS       XP_040941685             152 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like At3g57200 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040941685
VERSION     XP_040941685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085751.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="glycosyltransferase-like At3g57200 isoform X6"
                     /calculated_mol_wt=17842
     CDS             1..152
                     /gene="LOC107953246"
                     /coded_by="XM_041085751.1:93..551"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mifqntvkse pflrkmsykf ligktfsgns sshltirslf vlrfsktmll esqpftslsk
       61 dmqhlpmfpe fwnlflyreh vvwgdkdlrl kllrkgiltr kytpmnydhl pkethfglyr
      121 eatrgnpnyf ltygnekeaa rvqdelcpng ah
//
LOCUS       XP_040941686             116 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040941686
VERSION     XP_040941686.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085752.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..116
                     /product="glycosyltransferase-like KOBITO 1 isoform X7"
                     /calculated_mol_wt=13347
     CDS             1..116
                     /gene="LOC107953246"
                     /coded_by="XM_041085752.1:834..1184"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle siptsgfcry rehvvwgdkd lrlkllrkgi
       61 ltrkytpmkn ydhlpkethf glyreatrgn pnyfltygne keaarvqdel cpngah
//
LOCUS       XP_040941687             115 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like At3g57200 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040941687
VERSION     XP_040941687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085753.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..115
                     /product="glycosyltransferase-like At3g57200 isoform X8"
                     /calculated_mol_wt=13219
     CDS             1..115
                     /gene="LOC107953246"
                     /coded_by="XM_041085753.1:281..628"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mfyhkvigvt tfylfvegha aspnvsrvle siptsgfcry rehvvwgdkd lrlkllrkgi
       61 ltrkytpmny dhlpkethfg lyreatrgnp nyfltygnek eaarvqdelc pngah
//
LOCUS       XP_040941688              92 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040941688
VERSION     XP_040941688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085754.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..92
                     /product="glycosyltransferase-like KOBITO 1 isoform X9"
                     /calculated_mol_wt=10936
     CDS             1..92
                     /gene="LOC107953246"
                     /coded_by="XM_041085754.1:334..612"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mqhlpmfpef wnlflyrehv vwgdkdlrlk llrkgiltrk ytpmknydhl pkethfglyr
       61 eatrgnpnyf ltygnekeaa rvqdelcpng ah
//
LOCUS       XP_040941689              92 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040941689
VERSION     XP_040941689.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085755.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..92
                     /product="glycosyltransferase-like KOBITO 1 isoform X9"
                     /calculated_mol_wt=10936
     CDS             1..92
                     /gene="LOC107953246"
                     /coded_by="XM_041085755.1:437..715"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mqhlpmfpef wnlflyrehv vwgdkdlrlk llrkgiltrk ytpmknydhl pkethfglyr
       61 eatrgnpnyf ltygnekeaa rvqdelcpng ah
//
LOCUS       XP_040941690              92 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like KOBITO 1 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040941690
VERSION     XP_040941690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085756.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..92
                     /product="glycosyltransferase-like KOBITO 1 isoform X9"
                     /calculated_mol_wt=10936
     CDS             1..92
                     /gene="LOC107953246"
                     /coded_by="XM_041085756.1:338..616"
                     /db_xref="GeneID:107953246"
ORIGIN      
        1 mqhlpmfpef wnlflyrehv vwgdkdlrlk llrkgiltrk ytpmknydhl pkethfglyr
       61 eatrgnpnyf ltygnekeaa rvqdelcpng ah
//
LOCUS       XP_040941691             245 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH35 [Gossypium hirsutum].
ACCESSION   XP_040941691
VERSION     XP_040941691.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085757.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="transcription factor bHLH35"
                     /calculated_mol_wt=27719
     Region          50..116
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(60..61,63,68,85..86)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381456"
     Site            order(66..67,70..71,73..74,78,86..87,90..91,94,96..97,
                     100..101)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381456"
     CDS             1..245
                     /gene="LOC121212616"
                     /coded_by="XM_041085757.1:210..947"
                     /db_xref="GeneID:121212616"
ORIGIN      
        1 mlamenieni gdeyknywet kyfleneeys wpidefsgyy dssspdgaas svaaknivse
       61 rnrrkklner lfalravvpn iskmdkasii kdaidyiqel hdqegriqae irelesgklk
      121 knpgfeydqe lsglrskktk ldnifdyggs raspievlel kvthmgektm vvsitcskkt
      181 dtmvrlcevf eslklkiita nitavsgrll ktvfveader ekdelkvqie taiaalndpq
      241 spmsm
//
LOCUS       XP_040941692             414 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941692
VERSION     XP_040941692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085758.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..414
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45255
     Region          <252..414
                     /region_name="PRCC"
                     /note="Mitotic checkpoint regulator, MAD2B-interacting;
                     pfam10253"
                     /db_xref="CDD:463026"
     CDS             1..414
                     /gene="LOC121212617"
                     /coded_by="XM_041085758.1:100..1344"
                     /db_xref="GeneID:121212617"
ORIGIN      
        1 mesllanyas sdddesqqit hpptppppkv ssllqpksss lftslpqpkq slksstkhhd
       61 edrnggggge vavrvpkpsl phpqnssnlf shlpqpkpqq ppnppvakri vqfkppinpn
      121 thvdsdddee eekerpkrge setlaqgpsv ksflssipap rnsttlgvap ssgsgrrsii
      181 dtqviptlts stfedkkeas idnnapnysn yewgsdvnag ttvgynnyvn ydqssvdqns
      241 gnygnndqni gsyanyadys syqsssdpni ggvdaatsyg syesygnyhv qyennwgdgs
      301 ttasmlpett giadfgvkik gkrgrndlpv eivevkqddl tknrpredqv kmtgiafgps
      361 yqpasskgkp tklhkrkhqi gslyfdmkqk emelqerrsr glltkaetqa kygw
//
LOCUS       XP_040941693            1182 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA ligase 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941693
VERSION     XP_040941693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085759.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1182
                     /product="DNA ligase 4 isoform X1"
                     /calculated_mol_wt=134477
     Region          61..599
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          655..741
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          802..898
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..1182
                     /gene="LOC121212618"
                     /coded_by="XM_041085759.1:200..3748"
                     /db_xref="GeneID:121212618"
ORIGIN      
        1 mteeiklsvl vslftwiqrs rpsakkrskf rkfldtfckp sdyfsamrli lpsldrergt
       61 yglkesvlai clidalglsr dsadalrlvn wrkggantga nagnfalvaa eilqrrqgtv
      121 sggltikeln elldrlasae sraektaifa tlinktnaqe mkwvimiilk dlklgiteks
      181 ifqefhpdae dlfnvtcdlk lvceklrdpt qrhkrqdiev gkavrpqlal rvrdpaaawk
      241 klhgkevvve ckfdgdriqi hkngtdihyy srnfldhsey qhgmsniitq nilvdrcild
      301 gemlvwdstl nqfaefgsnq eiakaakdgl dsdrqlcyva fdilyvgdts vihqslkerh
      361 eilqkvvkpl kgrleilvpn gglnanrppg epcwsciahs vndverffke tienrdegiv
      421 ikdlnskwep sdrsgkwlkl kpdyiragsd ldvliiggyy gsgrrggeva qflvgladrp
      481 dpnayprrfi sfcrvgtglt dddletvakk lkpyfrkyey pkkmqpsfyq vtnhskerpd
      541 vwiespeksi ilsitsdirt irsevfaapy slrfpridrv rydkpwhecl dvqsfvelvh
      601 ssngttqkgt eqenqpdskt khkaharkad rknvsivpsh firtdtscvk getlifsnlm
      661 fyfvnvppty sldsfhkmvv ehggrfsmnl nnsvthcvaa eskgikyqaa klhgdiihys
      721 waldccsqkk liplqpkyfl flsessktkl qqevdqyfdp yywdldladi kqllnniqrs
      781 ensktidyyr akycpndkws lfhgcsvyfy ssaeslkadw qvllnlalrr lkleilmggg
      841 kisenlshat hlvvlsvpgl dvdfdsliks csfeeknlvw kkglhvvksq wlenciergq
      901 klredqyslk pndfeetnfv eskldqnlek skpdfngvqn kgtstspesk tkqrggkdhp
      961 eksisavtps hgnrkrrpas kntkkgktiv traqrvprrr gkmsvkided gseesgsddk
     1021 tneeigkgeg nntecyrrag renfefhqnq aaeenvginw pnkahdtvmc eanndqpgnk
     1081 aekfdhmeld egkygheist seklevmvdp vqamlldmip slgikhvett nsvvqnekph
     1141 mdndadirvv edekldadfi pqpqkkkkvs ykdvagellk dw
//
LOCUS       XP_040941694            1158 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA ligase 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941694
VERSION     XP_040941694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085760.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1158
                     /product="DNA ligase 4 isoform X2"
                     /calculated_mol_wt=131650
     Region          61..575
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          631..717
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          778..874
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..1158
                     /gene="LOC121212618"
                     /coded_by="XM_041085760.1:200..3676"
                     /db_xref="GeneID:121212618"
ORIGIN      
        1 mteeiklsvl vslftwiqrs rpsakkrskf rkfldtfckp sdyfsamrli lpsldrergt
       61 yglkesvlai clidalglsr dsadalrlvn wrkggantga nagnfalvaa eilqrrqgtv
      121 sggltikeln elldrlasae sraektaifa tlinktnaqe mkwvimiilk dlklgiteks
      181 ifqefhpdae dlfnvtcdlk lvceklrdpt qrhkrqdiev gkavrpqlal rvrdpaaawk
      241 klhgkevvve ckfdgdriqi hkngtdihyy srcildgeml vwdstlnqfa efgsnqeiak
      301 aakdgldsdr qlcyvafdil yvgdtsvihq slkerheilq kvvkplkgrl eilvpnggln
      361 anrppgepcw sciahsvndv erffketien rdegivikdl nskwepsdrs gkwlklkpdy
      421 iragsdldvl iiggyygsgr rggevaqflv gladrpdpna yprrfisfcr vgtgltdddl
      481 etvakklkpy frkyeypkkm qpsfyqvtnh skerpdvwie speksiilsi tsdirtirse
      541 vfaapyslrf pridrvrydk pwhecldvqs fvelvhssng ttqkgteqen qpdsktkhka
      601 harkadrknv sivpshfirt dtscvkgetl ifsnlmfyfv nvpptyslds fhkmvvehgg
      661 rfsmnlnnsv thcvaaeskg ikyqaaklhg diihyswald ccsqkklipl qpkyflflse
      721 ssktklqqev dqyfdpyywd ldladikqll nniqrsensk tidyyrakyc pndkwslfhg
      781 csvyfyssae slkadwqvll nlalrrlkle ilmgggkise nlshathlvv lsvpgldvdf
      841 dslikscsfe eknlvwkkgl hvvksqwlen ciergqklre dqyslkpndf eetnfveskl
      901 dqnlekskpd fngvqnkgts tspesktkqr ggkdhpeksi savtpshgnr krrpaskntk
      961 kgktivtraq rvprrrgkms vkidedgsee sgsddktnee igkgegnnte cyrragrenf
     1021 efhqnqaaee nvginwpnka hdtvmceann dqpgnkaekf dhmeldegky gheistsekl
     1081 evmvdpvqam lldmipslgi khvettnsvv qnekphmdnd adirvvedek ldadfipqpq
     1141 kkkkvsykdv agellkdw
//
LOCUS       XP_040941695            1128 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA ligase 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941695
VERSION     XP_040941695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085761.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1128
                     /product="DNA ligase 4 isoform X3"
                     /calculated_mol_wt=128570
     Region          61..599
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          655..741
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          757..844
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..1128
                     /gene="LOC121212618"
                     /coded_by="XM_041085761.1:200..3586"
                     /db_xref="GeneID:121212618"
ORIGIN      
        1 mteeiklsvl vslftwiqrs rpsakkrskf rkfldtfckp sdyfsamrli lpsldrergt
       61 yglkesvlai clidalglsr dsadalrlvn wrkggantga nagnfalvaa eilqrrqgtv
      121 sggltikeln elldrlasae sraektaifa tlinktnaqe mkwvimiilk dlklgiteks
      181 ifqefhpdae dlfnvtcdlk lvceklrdpt qrhkrqdiev gkavrpqlal rvrdpaaawk
      241 klhgkevvve ckfdgdriqi hkngtdihyy srnfldhsey qhgmsniitq nilvdrcild
      301 gemlvwdstl nqfaefgsnq eiakaakdgl dsdrqlcyva fdilyvgdts vihqslkerh
      361 eilqkvvkpl kgrleilvpn gglnanrppg epcwsciahs vndverffke tienrdegiv
      421 ikdlnskwep sdrsgkwlkl kpdyiragsd ldvliiggyy gsgrrggeva qflvgladrp
      481 dpnayprrfi sfcrvgtglt dddletvakk lkpyfrkyey pkkmqpsfyq vtnhskerpd
      541 vwiespeksi ilsitsdirt irsevfaapy slrfpridrv rydkpwhecl dvqsfvelvh
      601 ssngttqkgt eqenqpdskt khkaharkad rknvsivpsh firtdtscvk getlifsnlm
      661 fyfvnvppty sldsfhkmvv ehggrfsmnl nnsvthcvaa eskgikyqaa klhgdiihys
      721 waldccsqkk liplqpkyfl flsessktkl qqevdqyfdp yywdldladi kqllnniqrs
      781 ensktidyyr akycpndkws lfhgcsvyfy ssaeslcsfe eknlvwkkgl hvvksqwlen
      841 ciergqklre dqyslkpndf eetnfveskl dqnlekskpd fngvqnkgts tspesktkqr
      901 ggkdhpeksi savtpshgnr krrpaskntk kgktivtraq rvprrrgkms vkidedgsee
      961 sgsddktnee igkgegnnte cyrragrenf efhqnqaaee nvginwpnka hdtvmceann
     1021 dqpgnkaekf dhmeldegky gheistsekl evmvdpvqam lldmipslgi khvettnsvv
     1081 qnekphmdnd adirvvedek ldadfipqpq kkkkvsykdv agellkdw
//
LOCUS       XP_040941696              90 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941696
VERSION     XP_040941696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085762.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..90
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10445
     CDS             1..90
                     /gene="LOC121212619"
                     /coded_by="XM_041085762.1:165..437"
                     /db_xref="GeneID:121212619"
ORIGIN      
        1 mamrkvysei kgmklkevpg yfkpmlsmgy lkksvqrgld nyhakyietd sieplyhvcf
       61 ggmifsylva lpnerrhleh kkhaeqhghh
//
LOCUS       XP_040941697              90 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941697
VERSION     XP_040941697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085763.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..90
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10445
     CDS             1..90
                     /gene="LOC121212619"
                     /coded_by="XM_041085763.1:165..437"
                     /db_xref="GeneID:121212619"
ORIGIN      
        1 mamrkvysei kgmklkevpg yfkpmlsmgy lkksvqrgld nyhakyietd sieplyhvcf
       61 ggmifsylva lpnerrhleh kkhaeqhghh
//
LOCUS       XP_040941698             157 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941698
VERSION     XP_040941698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085764.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..157
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17585
     CDS             1..157
                     /gene="LOC121212620"
                     /coded_by="XM_041085764.1:320..793"
                     /db_xref="GeneID:121212620"
ORIGIN      
        1 marmlpksll lrhsifhhhs sflrrfsska klyeidldsa sssasavnkm eeiihsiivq
       61 kstpdwlpfl pgssfwvplp rqgskkvsdf idqltnqltp deylslttgr gwpcvnffvs
      121 dghytdvtsm dvelkfpeqe egevkveili gsgdkts
//
LOCUS       XP_040941699              90 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941699
VERSION     XP_040941699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085765.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..90
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10524
     CDS             1..90
                     /gene="LOC121202888"
                     /coded_by="XM_041085765.1:241..513"
                     /db_xref="GeneID:121202888"
ORIGIN      
        1 mamrkiysei kgmklkevpg yfkpmlsvrf vkksiqrgld nyhakyietd sieplyhicf
       61 ggmifsylva lpnerrhleh kqhaeqhghh
//
LOCUS       XP_040941700              90 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941700
VERSION     XP_040941700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085766.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..90
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10524
     CDS             1..90
                     /gene="LOC121202888"
                     /coded_by="XM_041085766.1:248..520"
                     /db_xref="GeneID:121202888"
ORIGIN      
        1 mamrkiysei kgmklkevpg yfkpmlsvrf vkksiqrgld nyhakyietd sieplyhicf
       61 ggmifsylva lpnerrhleh kqhaeqhghh
//
LOCUS       XP_040941701             744 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941701
VERSION     XP_040941701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085767.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..744
                     /product="uncharacterized protein"
                     /calculated_mol_wt=82736
     Region          6..274
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..744
                     /gene="LOC121212621"
                     /coded_by="XM_041085767.1:80..2314"
                     /db_xref="GeneID:121212621"
ORIGIN      
        1 mdnplsqnpd stwsqyfrna elekmvnqdl srlypehesy fhtpgcqgml rrilllwclr
       61 hpdcgyrqgm hellapllyv lhvdverlle vrklyedlfi dkfdgfsfee ngvaynfdfk
      121 kfadsvedei esqgnskqvm slyeldpelq avvllsdayg aegelgivls ekfmehdayc
      181 mfdalmigah gsvamadffa sspaaesqsg vppvieasaa lyhllsivds slhshlvelg
      241 vepqyfalrw lrvlfgrefs lqdllvvwdk ifsednspld evsddcehfs fkllssrrgt
      301 liaamavsmi lylrssllat etatsclqrl lnfpesinlk kliakaeslq tlalvsniss
      361 lpstfvgayn cskspinahn vssdlvcskt tlnlvpdsyw eekwrvlhka eeqrqnssek
      421 ktssgkkkws ervkfrlsrt eseplpaire kcklehtlsv rrslledlsk qlgleedvet
      481 ggcfevsnsv dhhpaevhgd gqncankgsi ctvedrcddg sgavvseens sifseppspp
      541 ssvindhdhd hendtekssv asnlsaddny vhqrsipedl pqpvslpped vylnslheng
      601 ssgkmvsatk eqrqlsgkfq wlhkfrgsiv seetsdkrgg iseaanspnh dskrntvdsf
      661 tagassnshp tnkgdamdqn mmdtlkhlgq amldhiqvve svfqqdqgqg gsldnlskni
      721 gkgqvtaita lkelrkisnl lsem
//
LOCUS       XP_040941702             289 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941702
VERSION     XP_040941702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085768.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31033
     CDS             1..289
                     /gene="LOC107940287"
                     /coded_by="XM_041085768.1:169..1038"
                     /db_xref="GeneID:107940287"
ORIGIN      
        1 maeesgtass ssssqprssp ntskisqvpp gysglptfqn gdfqmfpvmy paivpgltsl
       61 qnqeqmnrga giyavpvlpf mghvsgipsn nlipltynip tqsvteagaa aedqgqgaqq
      121 pqhqqqqvgp qrqvvvrrfq iafqldllli lklaaviflf nqdgsrqrla vlvffaslvy
      181 lyqtgaltpl irwlsqgmqr aaapphpprp aaraenvpaa qqgnenvava gaenenrpav
      241 dgnqavenen epepglgnag nqwwgivkei qmivfgfits llpgfhnie
//
LOCUS       XP_040941703             615 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g62470,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941703
VERSION     XP_040941703.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085769.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..615
                     /product="pentatricopeptide repeat-containing protein
                     At3g62470, mitochondrial"
                     /calculated_mol_wt=70547
     Region          207..234
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          241..268
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          275..320
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          276..303
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <305..>583
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          310..337
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          345..372
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          378..407
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          413..441
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          448..476
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          483..512
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          518..547
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          556..582
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..615
                     /gene="LOC121202950"
                     /coded_by="XM_041085769.1:80..1927"
                     /db_xref="GeneID:121202950"
ORIGIN      
        1 mylslrtssa aaprfiqrhy nsgfsyrfih ggpnadfffl nqtprprekr rrrggrvcll
       61 rgsslplfnl lhpspyhslh rfslqipfpl phsssfrhlq apllaldlnl sgfssvtggd
      121 rdsdtdtgsd siesrsdpke vervckvide lfsldrnmea vldecrinlt hdlvidvlnr
      181 frharkpafr ffcwagqkpg fnhdsrtynk mmnvlsknrq fitmsrliee mgangvstld
      241 tfiiaikafa aakerrkavm vfdlmkkyky kvdvdivncl ldslgrvmla reaqmlfekl
      301 rdrftpnlns ytillngwck vrnlieagkv wnemidkgfe pdvvahnvmi dgllrsrkms
      361 daaklfeamk skgpspnvrs ytimirefck qgkmnfaiqy feemrgsgcl pdaaiytcli
      421 tgfgnqrnmd vvfrllkemq eigcppdsqt ynaliklltt qrkpddamrv ykkmiqtgiq
      481 ptihtfnmmm ksffqsrdyd tsraiwdemr engfcpddvs ytifigglir lgrsgdacrl
      541 leemfekgmk ppqldynkfa aefsragksd ileelaqkmk ssgnvqasdi ftrwaemmkk
      601 rikrkgpfkt dgrci
//
LOCUS       XP_040941704             389 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941704
VERSION     XP_040941704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085770.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..389
                     /product="glycosyltransferase BC10 isoform X1"
                     /calculated_mol_wt=44764
     Region          108..337
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..389
                     /gene="LOC121212622"
                     /coded_by="XM_041085770.1:443..1612"
                     /db_xref="GeneID:121212622"
ORIGIN      
        1 mkgaqawrlg smgdmqilpg srhrpplkrp iwiislvslv clflvcayiy ppqgsaacyv
       61 fssrgckvlt nwlppsptre lsdeeiasqv virdilsnpp vqsknpkiaf mfltpsslpf
      121 eklwdmffrg hegkfsvyvh askgkpvhvs hyflnrdirs devvwgkism vdaekrllah
      181 alqdtdnqhf vllsescvpl hnfdyiynyl mhanmsfvdc fldpgphgng rysehmlpev
      241 ekknfrkgaq wfsmrrqhal ivmadslyys rfrdyckpgf dgknciadeh ylptffnmid
      301 pggianwsvt hvdwserkwh pksykaqdvt edllnnitsi dlsihvtsea kserlvqpcl
      361 wngikrpcyl farkfypetv dklmtllnf
//
LOCUS       XP_040941705             389 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941705
VERSION     XP_040941705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085771.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..389
                     /product="glycosyltransferase BC10 isoform X1"
                     /calculated_mol_wt=44764
     Region          108..337
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..389
                     /gene="LOC121212622"
                     /coded_by="XM_041085771.1:274..1443"
                     /db_xref="GeneID:121212622"
ORIGIN      
        1 mkgaqawrlg smgdmqilpg srhrpplkrp iwiislvslv clflvcayiy ppqgsaacyv
       61 fssrgckvlt nwlppsptre lsdeeiasqv virdilsnpp vqsknpkiaf mfltpsslpf
      121 eklwdmffrg hegkfsvyvh askgkpvhvs hyflnrdirs devvwgkism vdaekrllah
      181 alqdtdnqhf vllsescvpl hnfdyiynyl mhanmsfvdc fldpgphgng rysehmlpev
      241 ekknfrkgaq wfsmrrqhal ivmadslyys rfrdyckpgf dgknciadeh ylptffnmid
      301 pggianwsvt hvdwserkwh pksykaqdvt edllnnitsi dlsihvtsea kserlvqpcl
      361 wngikrpcyl farkfypetv dklmtllnf
//
LOCUS       XP_040941706             389 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941706
VERSION     XP_040941706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085772.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..389
                     /product="glycosyltransferase BC10 isoform X1"
                     /calculated_mol_wt=44764
     Region          108..337
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..389
                     /gene="LOC121212622"
                     /coded_by="XM_041085772.1:257..1426"
                     /db_xref="GeneID:121212622"
ORIGIN      
        1 mkgaqawrlg smgdmqilpg srhrpplkrp iwiislvslv clflvcayiy ppqgsaacyv
       61 fssrgckvlt nwlppsptre lsdeeiasqv virdilsnpp vqsknpkiaf mfltpsslpf
      121 eklwdmffrg hegkfsvyvh askgkpvhvs hyflnrdirs devvwgkism vdaekrllah
      181 alqdtdnqhf vllsescvpl hnfdyiynyl mhanmsfvdc fldpgphgng rysehmlpev
      241 ekknfrkgaq wfsmrrqhal ivmadslyys rfrdyckpgf dgknciadeh ylptffnmid
      301 pggianwsvt hvdwserkwh pksykaqdvt edllnnitsi dlsihvtsea kserlvqpcl
      361 wngikrpcyl farkfypetv dklmtllnf
//
LOCUS       XP_040941707             389 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941707
VERSION     XP_040941707.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085773.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..389
                     /product="glycosyltransferase BC10 isoform X1"
                     /calculated_mol_wt=44764
     Region          108..337
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..389
                     /gene="LOC121212622"
                     /coded_by="XM_041085773.1:236..1405"
                     /db_xref="GeneID:121212622"
ORIGIN      
        1 mkgaqawrlg smgdmqilpg srhrpplkrp iwiislvslv clflvcayiy ppqgsaacyv
       61 fssrgckvlt nwlppsptre lsdeeiasqv virdilsnpp vqsknpkiaf mfltpsslpf
      121 eklwdmffrg hegkfsvyvh askgkpvhvs hyflnrdirs devvwgkism vdaekrllah
      181 alqdtdnqhf vllsescvpl hnfdyiynyl mhanmsfvdc fldpgphgng rysehmlpev
      241 ekknfrkgaq wfsmrrqhal ivmadslyys rfrdyckpgf dgknciadeh ylptffnmid
      301 pggianwsvt hvdwserkwh pksykaqdvt edllnnitsi dlsihvtsea kserlvqpcl
      361 wngikrpcyl farkfypetv dklmtllnf
//
LOCUS       XP_040941708             362 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941708
VERSION     XP_040941708.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085774.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="glycosyltransferase BC10 isoform X2"
                     /calculated_mol_wt=41338
     Region          108..310
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..362
                     /gene="LOC121212622"
                     /coded_by="XM_041085774.1:443..1531"
                     /db_xref="GeneID:121212622"
ORIGIN      
        1 mkgaqawrlg smgdmqilpg srhrpplkrp iwiislvslv clflvcayiy ppqgsaacyv
       61 fssrgckvlt nwlppsptre lsdeeiasqv virdilsnpp vqsknpkiaf mfltpsslpf
      121 eklwdmffrg hegkfsvyvh askgkpvhvs hyflnrdirs devvwgkism vdaekrllah
      181 alqdtdnqhf vllsescvpl hnfdyiynyl mhanmsfvdc fldpgphgng rysehmlpev
      241 ekknfrkgaq pgfdgkncia dehylptffn midpggianw svthvdwser kwhpksykaq
      301 dvtedllnni tsidlsihvt seakserlvq pclwngikrp cylfarkfyp etvdklmtll
      361 nf
//
LOCUS       XP_040941709             362 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941709
VERSION     XP_040941709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085775.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="glycosyltransferase BC10 isoform X2"
                     /calculated_mol_wt=41338
     Region          108..310
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..362
                     /gene="LOC121212622"
                     /coded_by="XM_041085775.1:274..1362"
                     /db_xref="GeneID:121212622"
ORIGIN      
        1 mkgaqawrlg smgdmqilpg srhrpplkrp iwiislvslv clflvcayiy ppqgsaacyv
       61 fssrgckvlt nwlppsptre lsdeeiasqv virdilsnpp vqsknpkiaf mfltpsslpf
      121 eklwdmffrg hegkfsvyvh askgkpvhvs hyflnrdirs devvwgkism vdaekrllah
      181 alqdtdnqhf vllsescvpl hnfdyiynyl mhanmsfvdc fldpgphgng rysehmlpev
      241 ekknfrkgaq pgfdgkncia dehylptffn midpggianw svthvdwser kwhpksykaq
      301 dvtedllnni tsidlsihvt seakserlvq pclwngikrp cylfarkfyp etvdklmtll
      361 nf
//
LOCUS       XP_016729213             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729213
VERSION     XP_016729213.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729213.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19453
     Region          14..155
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..176
                     /gene="LOC107940291"
                     /coded_by="XM_016873724.2:1..531"
                     /db_xref="GeneID:107940291"
ORIGIN      
        1 mgccvssscs ckhaspntvr lvhlngyved ldypisvsqa ignppkqflc taaqllsags
       61 qplspdaplq pgqlyfvlpf stlkgdaspl dmaalvkrlt erakshralp etrclsrttm
      121 tmngrtrrre ttvhvgvrrs yrvrswkpil dtiremsfsr rsesdiqeid fitsnv
//
LOCUS       XP_016729208             127 aa            linear   PLN 06-AUG-2024
DEFINITION  stigma-specific STIG1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016729208
VERSION     XP_016729208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873719.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..127
                     /product="stigma-specific STIG1-like protein 1"
                     /calculated_mol_wt=14207
     Region          1..127
                     /region_name="Stig1"
                     /note="Stigma-specific protein, Stig1; pfam04885"
                     /db_xref="CDD:461466"
     CDS             1..127
                     /gene="LOC107940283"
                     /coded_by="XM_016873719.2:36..419"
                     /db_xref="GeneID:107940283"
ORIGIN      
        1 maifaaittq ahfdkdvpnv qtdqissrgl rrfltqqypk hgmtcdkfpr icrqkagspg
       61 pdcckrkcvn vmkdrfncgm cgykckysei cckgqcvnas fdkrncggch kkckkgefcv
      121 ygmcnya
//
LOCUS       XP_040941710             156 aa            linear   PLN 06-AUG-2024
DEFINITION  importin-5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941710
VERSION     XP_040941710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085776.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..156
                     /product="importin-5 isoform X1"
                     /calculated_mol_wt=17494
     CDS             1..156
                     /gene="LOC107943892"
                     /coded_by="XM_041085776.1:1122..1592"
                     /db_xref="GeneID:107943892"
ORIGIN      
        1 mpylkailvn atdksncmlr aksmecislv gmavgkekfr ddakqvmevl mslqgsqmet
       61 ddpttsymlq awarlckclg qdflpymsvv mppllqsaql kpdvtlhlqi qimisrtltm
      121 kvwkplssgi kelgsrlasw rkrqqnvtcf vamlms
//
LOCUS       XP_040941711             130 aa            linear   PLN 06-AUG-2024
DEFINITION  importin-5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941711
VERSION     XP_040941711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085777.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..130
                     /product="importin-5 isoform X2"
                     /calculated_mol_wt=14473
     CDS             1..130
                     /gene="LOC107943892"
                     /coded_by="XM_041085777.1:246..638"
                     /db_xref="GeneID:107943892"
ORIGIN      
        1 mgqtlqvfgt rlpplhecch aspspvcste arcdftsads dndiedsdde smetiilgdk
       61 rigiktsvle ekatecnmlc cyadelkegf lpwidqaalt lvplkfyfhe evkkaavsgr
      121 mvmiycfyft
//
LOCUS       XP_040941712             126 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit beta-3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941712
VERSION     XP_040941712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085778.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..126
                     /product="importin subunit beta-3 isoform X3"
                     /calculated_mol_wt=14098
     CDS             1..126
                     /gene="LOC107943892"
                     /coded_by="XM_041085778.1:122..502"
                     /db_xref="GeneID:107943892"
ORIGIN      
        1 mvqfgasicl ppvtfvmevl mslqgsqmet ddpttsymlq awarlckclg qdflpymsvv
       61 mppllqsaql kpdvtlhlqi qimisrtltm kvwkplssgi kelgsrlasw rkrqqnvtcf
      121 vamlms
//
LOCUS       XP_040941714             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941714
VERSION     XP_040941714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085780.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X1"
                     /calculated_mol_wt=17041
     Region          <62..151
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..152
                     /gene="LOC121203431"
                     /coded_by="XM_041085780.1:1294..1752"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mlplqitsnf smtkalsagf fhhcccyrfh lgvnfidsnv gknklvrkgg ekrspnlmrr
       61 hkedgllhta cgtpnyvape vfkdkgydgt ssdiwycgvi lfilmagylp fepsliglyk
      121 kiweasfsyp swfssgarnl ikrildpnpl tv
//
LOCUS       XP_040941715             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941715
VERSION     XP_040941715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085781.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X1"
                     /calculated_mol_wt=17041
     Region          <62..151
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..152
                     /gene="LOC121203431"
                     /coded_by="XM_041085781.1:1629..2087"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mlplqitsnf smtkalsagf fhhcccyrfh lgvnfidsnv gknklvrkgg ekrspnlmrr
       61 hkedgllhta cgtpnyvape vfkdkgydgt ssdiwycgvi lfilmagylp fepsliglyk
      121 kiweasfsyp swfssgarnl ikrildpnpl tv
//
LOCUS       XP_040941716             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941716
VERSION     XP_040941716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085782.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X1"
                     /calculated_mol_wt=17041
     Region          <62..151
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..152
                     /gene="LOC121203431"
                     /coded_by="XM_041085782.1:950..1408"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mlplqitsnf smtkalsagf fhhcccyrfh lgvnfidsnv gknklvrkgg ekrspnlmrr
       61 hkedgllhta cgtpnyvape vfkdkgydgt ssdiwycgvi lfilmagylp fepsliglyk
      121 kiweasfsyp swfssgarnl ikrildpnpl tv
//
LOCUS       XP_040941717             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941717
VERSION     XP_040941717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085783.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X1"
                     /calculated_mol_wt=17041
     Region          <62..151
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..152
                     /gene="LOC121203431"
                     /coded_by="XM_041085783.1:1400..1858"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mlplqitsnf smtkalsagf fhhcccyrfh lgvnfidsnv gknklvrkgg ekrspnlmrr
       61 hkedgllhta cgtpnyvape vfkdkgydgt ssdiwycgvi lfilmagylp fepsliglyk
      121 kiweasfsyp swfssgarnl ikrildpnpl tv
//
LOCUS       XP_040941718             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941718
VERSION     XP_040941718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085784.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X1"
                     /calculated_mol_wt=17041
     Region          <62..151
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..152
                     /gene="LOC121203431"
                     /coded_by="XM_041085784.1:477..935"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mlplqitsnf smtkalsagf fhhcccyrfh lgvnfidsnv gknklvrkgg ekrspnlmrr
       61 hkedgllhta cgtpnyvape vfkdkgydgt ssdiwycgvi lfilmagylp fepsliglyk
      121 kiweasfsyp swfssgarnl ikrildpnpl tv
//
LOCUS       XP_040941719             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941719
VERSION     XP_040941719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085785.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X1"
                     /calculated_mol_wt=17041
     Region          <62..151
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..152
                     /gene="LOC121203431"
                     /coded_by="XM_041085785.1:1167..1625"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mlplqitsnf smtkalsagf fhhcccyrfh lgvnfidsnv gknklvrkgg ekrspnlmrr
       61 hkedgllhta cgtpnyvape vfkdkgydgt ssdiwycgvi lfilmagylp fepsliglyk
      121 kiweasfsyp swfssgarnl ikrildpnpl tv
//
LOCUS       XP_040941720              95 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941720
VERSION     XP_040941720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085786.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..95
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X2"
                     /calculated_mol_wt=10644
     Region          <5..94
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..95
                     /gene="LOC121203431"
                     /coded_by="XM_041085786.1:880..1167"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mrrhkedgll htacgtpnyv apevfkdkgy dgtssdiwyc gvilfilmag ylpfepslig
       61 lykkiweasf sypswfssga rnlikrildp npltv
//
LOCUS       XP_040941721              95 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941721
VERSION     XP_040941721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085787.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..95
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X2"
                     /calculated_mol_wt=10644
     Region          <5..94
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..95
                     /gene="LOC121203431"
                     /coded_by="XM_041085787.1:1042..1329"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mrrhkedgll htacgtpnyv apevfkdkgy dgtssdiwyc gvilfilmag ylpfepslig
       61 lykkiweasf sypswfssga rnlikrildp npltv
//
LOCUS       XP_040941722              95 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941722
VERSION     XP_040941722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085788.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..95
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X2"
                     /calculated_mol_wt=10644
     Region          <5..94
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..95
                     /gene="LOC121203431"
                     /coded_by="XM_041085788.1:651..938"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mrrhkedgll htacgtpnyv apevfkdkgy dgtssdiwyc gvilfilmag ylpfepslig
       61 lykkiweasf sypswfssga rnlikrildp npltv
//
LOCUS       XP_040941723              95 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 9 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941723
VERSION     XP_040941723.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085789.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..95
                     /product="CBL-interacting serine/threonine-protein kinase
                     9 isoform X2"
                     /calculated_mol_wt=10644
     Region          <5..94
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..95
                     /gene="LOC121203431"
                     /coded_by="XM_041085789.1:545..832"
                     /db_xref="GeneID:121203431"
ORIGIN      
        1 mrrhkedgll htacgtpnyv apevfkdkgy dgtssdiwyc gvilfilmag ylpfepslig
       61 lykkiweasf sypswfssga rnlikrildp npltv
//
LOCUS       XP_040941724             103 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases II, IV and V subunit 3-like [Gossypium
            hirsutum].
ACCESSION   XP_040941724
VERSION     XP_040941724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085790.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..103
                     /product="DNA-directed RNA polymerases II, IV and V
                     subunit 3-like"
                     /calculated_mol_wt=11193
     Region          <25..86
                     /region_name="RNAP_RPB11_RPB3"
                     /note="RPB11 and RPB3 subunits of RNA polymerase; cl11409"
                     /db_xref="CDD:472176"
     CDS             1..103
                     /gene="LOC107940284"
                     /coded_by="XM_041085790.1:24..335"
                     /db_xref="GeneID:107940284"
ORIGIN      
        1 milffdidpn tqqvvvvdpe aytyddevlk kaeamgkpgl veiyakedsf iftvestgai
       61 kasqlvlnai eilkqkldav rlsedtvead dqfgelgahm qgg
//
LOCUS       XP_016729219             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729219
VERSION     XP_016729219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873730.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14999
     CDS             1..135
                     /gene="LOC107940297"
                     /coded_by="XM_016873730.2:196..603"
                     /db_xref="GeneID:107940297"
ORIGIN      
        1 mkrvlfrgis ltthnflhsc tktsqnpvhs ftplaastrs rlrlhssesd spvekkpdpv
       61 tesasvaegh vedvalpvvh msdkeleari kkysegnlea ilpvlhailq rmlagkhdea
      121 delrrklkth gfcrk
//
LOCUS       XP_016729220             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729220
VERSION     XP_016729220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14999
     CDS             1..135
                     /gene="LOC107940297"
                     /coded_by="XM_016873731.2:196..603"
                     /db_xref="GeneID:107940297"
ORIGIN      
        1 mkrvlfrgis ltthnflhsc tktsqnpvhs ftplaastrs rlrlhssesd spvekkpdpv
       61 tesasvaegh vedvalpvvh msdkeleari kkysegnlea ilpvlhailq rmlagkhdea
      121 delrrklkth gfcrk
//
LOCUS       XP_040941726             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941726
VERSION     XP_040941726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085792.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14999
     CDS             1..135
                     /gene="LOC107940297"
                     /coded_by="XM_041085792.1:196..603"
                     /db_xref="GeneID:107940297"
ORIGIN      
        1 mkrvlfrgis ltthnflhsc tktsqnpvhs ftplaastrs rlrlhssesd spvekkpdpv
       61 tesasvaegh vedvalpvvh msdkeleari kkysegnlea ilpvlhailq rmlagkhdea
      121 delrrklkth gfcrk
//
LOCUS       XP_016733555            1109 aa            linear   PLN 06-AUG-2024
DEFINITION  importin-5 [Gossypium hirsutum].
ACCESSION   XP_016733555
VERSION     XP_016733555.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878066.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016733555.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1109
                     /product="importin-5"
                     /calculated_mol_wt=122606
     Region          63..>636
                     /region_name="KAP95"
                     /note="Karyopherin (importin) beta [Intracellular
                     trafficking and secretion]; COG5215"
                     /db_xref="CDD:227540"
     Region          101..124
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(116..117,120,123..124,155..156,159,162..163,168,
                     197..198,201,204..205,208,232,235..236,262..263,266,
                     269..270)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          138..168
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          178..212
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          243..271
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          278..370
                     /region_name="Importin_rep_4"
                     /note="Importin repeat; pfam18808"
                     /db_xref="CDD:408579"
     Region          412..442
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          454..484
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          495..524
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          538..568
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          778..883
                     /region_name="Importin_rep_6"
                     /note="Importin repeat 6; pfam18829"
                     /db_xref="CDD:465881"
     Region          880..902
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          890..942
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     Region          918..946
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          958..994
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1109
                     /gene="LOC107944248"
                     /coded_by="XM_016878066.2:217..3546"
                     /db_xref="GeneID:107944248"
ORIGIN      
        1 mdqqsqlavi lgsdpvpfet lishlmsssn eqrshaealf nvckqsdpda lclrlahllq
       61 vcaqpdtram aaillrkllt rddsyiwprl nvsthssiks vllnqiqvet aqslskklcd
      121 tvselassil pengwpellp fmfqcvssds prlqesafli faqlsqyigd vltpfikdlh
      181 tvflkclsgn snadvkiaal navinfiqcl tsssdrdrfq dllpammktl tealnngnea
      241 taqealelli elaemeprfl rrqivdvvgs mlqiaeaesl eegtrhlaie fvvtlaeare
      301 rapgmmrklp qfisrlfail mrllldiedd aawhtaeved edagetsnya vgqecldrla
      361 islggntivp vaseqfstyl aapewqkhha alialaqiae gcskvmvknl eqvvsmvlns
      421 fnhshprvrw aainaigqls tdlgpdlqnq yhqrvlpala aamddfqnpr vqahaasavl
      481 nfsenctpei ltpyldgivs kllvllqngk qmvqegalta lasvadssqe hfqkyydavm
      541 pylkailvna tdksnrmlra ksmecislvg mavgkekfrd dakqvmevlm slqgsqmetd
      601 dpttsymlqa warlckclgq dflpymsvvm ppllqsaqlk pdvtitsads dndiedsdde
      661 smetitlgdk rigiktsvle ekatacnmlc cyadelkegf fpwidqvapt lvpllkfyfh
      721 eevrkaavsa mpellrsakl avekgmaqgr netyvkqlsd yvipalveal hkepdteica
      781 smldalnecv qisgplldes qvrsivdeik qvitasasrk seraerakae dfdaeegeli
      841 keeneqeeev fdqvgeilgt liktfkasfl pffdelssyl tpmwgkdktp eerriaicif
      901 ddvaeqcrea alkyydtylp fileacnden pdvrqaavyg lgvcaefggp vfkplvgeal
      961 srlnavirhp nasqpenvma ydnavsalgk iclfhrdsid atqvvpawln clpikgdlie
     1021 akvvheqlcs mversdnevl gpnhnflpki vsvfaevlcg kdlateqtas rmvnllrqlq
     1081 qtlppaalas tlsslqpqqq lalqsilss
//
LOCUS       XP_016733556             257 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERN1 [Gossypium hirsutum].
ACCESSION   XP_016733556
VERSION     XP_016733556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878067.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="ethylene-responsive transcription factor ERN1"
                     /calculated_mol_wt=28518
     Region          19..80
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(21..22,24,26,28,30,34,36,43,45,48)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..257
                     /gene="LOC107944249"
                     /coded_by="XM_016878067.2:751..1524"
                     /db_xref="GeneID:107944249"
ORIGIN      
        1 mehqvqtqqk gkfkerrnkf vgvrqrpsgk wvaeikdttq kirmwlgtfe taeeaarayd
       61 eaacllrgsn trtnfathvp tdshlslkir nllnhkkslr qgknnnsnst tnsnkitika
      121 stivgsndsi nssisnagth sfmcnslvfd gayrpelsgf vgelgpdpsq lgqswmiptg
      181 fdqiplsqgl elpqevgvlp qgidqelmef erlkverqvs atlyamngvn eylqsaafdp
      241 ndaiwdlptl chlfcqs
//
LOCUS       XP_016733557             449 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin alpha-5 chain [Gossypium hirsutum].
ACCESSION   XP_016733557
VERSION     XP_016733557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..449
                     /product="tubulin alpha-5 chain"
                     /calculated_mol_wt=49603
     Region          1..449
                     /region_name="PLN00221"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:177802"
     CDS             1..449
                     /gene="LOC107944250"
                     /coded_by="XM_016878068.2:159..1508"
                     /db_xref="GeneID:107944250"
ORIGIN      
        1 mreiisihig qagiqvgnsc welyclehei qpdgmmpsdt svgvandafn tffsetgsgk
       61 hvpravfvdl eptvidevrt gtyrqlfhpe qlisgkedaa nnfarghyti gkeivdlcld
      121 rvrkladnct glqgflvfna vgggtgsglg slllerlsvd ygkksklgft iypspqvsta
      181 vvepynsvls thsllehtdv avlldneaiy dicrrsldie rptytnlnrl isqiissltt
      241 slrfdgainv dvtefqtnlv pyprihfmls syapvisaek ayheqlsvpe itnavfepss
      301 mmakcdprhg kymacclmyr gdvvpkdvna avatiktkrt vqfvdwcptg fkcginyqpp
      361 tvvpggdlak vqravcmisn ntavaevfar idhkfdlmys krafvhwyvg egmeegefse
      421 aredlaalek dyeevgaegv edeedaedy
//
LOCUS       XP_040941727             560 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_040941727
VERSION     XP_040941727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085793.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..560
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=62555
     Region          10..560
                     /region_name="PLN02354"
                     /note="copper ion binding / oxidoreductase"
                     /db_xref="CDD:177987"
     CDS             1..560
                     /gene="LOC121212625"
                     /coded_by="XM_041085793.1:99..1781"
                     /db_xref="GeneID:121212625"
ORIGIN      
        1 mvggrkgkem arltlismlf lwagsmlmvq ggdptlffew nvtygtiapl gvpvkgilin
       61 gqfpgpnins ttnnnivinv fnnldepflv twngiqhrkn swqdgvlgtn cpiprgknyt
      121 ykfqvkdqig syiyypvtam hkavggfggl rvnsrllipv pyadpaddyt llvgdffnkg
      181 htslkkilds grnlgrcdgv hlngkvakgd gkdeplftme agktykyric ntgiktslnv
      241 rfqghtmklv emegshtmqn dydsldvhvg qcfsvlvtan qeprdyyvva strftkrevt
      301 atgiirykng kgaasselpp ppvgwawsln qfrtfrwnlt snaarpnpqg sykygsinit
      361 rtiklantaq rvdgklryal ngvsyveptt plklaeyygv adkvfkydti pdeppsdntk
      421 vtlapivlnm thrnfveiif enhetaiqsy hlsgysffav gmdvgkwspe krmnynllda
      481 vsrhtiqvfp nswsailltf dncgmwnlrs etwdrhylgq qlyasvispn rslkdeynlp
      541 egvltcgivq gmprpppfss
//
LOCUS       XP_040941728             551 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_040941728
VERSION     XP_040941728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085794.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..551
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=61606
     Region          1..551
                     /region_name="PLN02354"
                     /note="copper ion binding / oxidoreductase"
                     /db_xref="CDD:177987"
     CDS             1..551
                     /gene="LOC121212627"
                     /coded_by="XM_041085794.1:192..1847"
                     /db_xref="GeneID:121212627"
ORIGIN      
        1 marltlvsvl flwagsmlmv qggdptlffe wnvtygtiap lgvpvkgili ngqfpgpnin
       61 sttnnnivvn vfnnldepfl vtwngvqhrk nswqdgvlgt ncpippgkny tykfqvkdqi
      121 gsyiyypvta mhkavggfgg lrvnsrllip vpyadpaddy tllvgdffnk ghtslkkild
      181 sgrnlgrcdg vhlngkvakg drkdeplftm eagktykyri cntgiktsln vrfqghtmkl
      241 vemegshtmq ndydsldvhv gqcfsvlvta nqeprdyyvv astrftrrev tatgiirykn
      301 gkgaasselp pppvgwawsl nqfrtfrwnl tsnaarpnpq gsykygsini trtiklanta
      361 qkvdgklrya lngvsyvept tplklaeyyg vadkvfkydt ipdepqsdnt kvtlapivln
      421 mthrnfveii fenhesaiqs yhlsgysffa vgmdvgkwsp ekrmnynlld avsrhtiqvf
      481 pnswsaillt fdncgmwnlr seiwdrhylg qqlyasvisp nrslkdeynl pegvltcgiv
      541 qgmprpppfs s
//
LOCUS       XP_040941729             551 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_040941729
VERSION     XP_040941729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085795.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..551
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=61329
     Region          1..548
                     /region_name="PLN02354"
                     /note="copper ion binding / oxidoreductase"
                     /db_xref="CDD:177987"
     CDS             1..551
                     /gene="LOC121212628"
                     /coded_by="XM_041085795.1:79..1734"
                     /db_xref="GeneID:121212628"
ORIGIN      
        1 mapltiiavf flwvgsllmv qggdptisfe wkvtygtisp lgvpvkgili ngqfpgpnin
       61 sttnnnvivn vfnnldepfl ltwsgvqhrk npwqdgvlgt ncpippgtny tykfqvkdqi
      121 gsymyypvtg mhkavggfgg lrinsrllip vpyadpaddy tiiagdffnk ghttlkkile
      181 sgrnlgrcdg vhingkvakg dgsdeplftm eagktykyri cnaglktsln vrfqghnmkl
      241 vemegshtvq ndyesldvhv gqcfsvlvta dqepkdyfvv astrftkqev tatgvirytn
      301 gkgapspklp pppvgwawsl nqfrtfrwnl tasaarpnpq gsykygsvni trtiklanta
      361 qkvdgklrya ingasyvept tplklaeyyg vadkvfkydt ipddppaeit kitmepvvln
      421 lthrnfmeii fenretaiqs yhlcgyaffa vavetgqwsp ekrknynlld avsrhtiqvf
      481 pkswaaills fdncgmwnir seiwdrrylg qqlyvsvlsp nkslrdeynm pegalvcgvv
      541 enmprpppay t
//
LOCUS       XP_040941730             551 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_040941730
VERSION     XP_040941730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085796.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..551
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=61559
     Region          1..551
                     /region_name="PLN02354"
                     /note="copper ion binding / oxidoreductase"
                     /db_xref="CDD:177987"
     CDS             1..551
                     /gene="LOC121212629"
                     /coded_by="XM_041085796.1:83..1738"
                     /db_xref="GeneID:121212629"
ORIGIN      
        1 marlllisml flwagsilmv qggdptlffe wnvtygtiap lgvpvkgili ngqfpgpnin
       61 sttnnnivih vfnnldepfl vtwngiqhrk nswqdgvlgt ncpippgkny tykfqvkdqi
      121 gsyiyypvta mhkavggfgg lrvnsrllip vpyadpaddy tllvgdffnk ghtslkkild
      181 sgrnlgrcdg vhlngkvakg dgkdeplftm eagktykyri cntgiktsln vrfqghtmkl
      241 vemegshtmq ndydsldvhv gqcfsvlvts nqeprdyyvv astrftrrev tatgiigykn
      301 gkgaasselp pppvgwawsl nqfrtfrwnl tsnaarpnpq gsykygsini trtirlanta
      361 qrvdgklrya lngvsyvept tplklaeyyg vaekvfkydt ipdeppsdnt kvtlapivln
      421 mthrnfveii fenhetaiqs yhlsgysffa vgmdvgkwsp ekrmnynlld avsrqtiqvf
      481 pnswsaillt fdncgmwnlr seiwdrhylg qqlyasvisp nrslkdeynl pegvltcgiv
      541 qgmprpppfs s
//
LOCUS       XP_016732008             551 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_016732008
VERSION     XP_016732008.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876519.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732008.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..551
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=61317
     Region          1..548
                     /region_name="PLN02354"
                     /note="copper ion binding / oxidoreductase"
                     /db_xref="CDD:177987"
     CDS             1..551
                     /gene="LOC107942800"
                     /coded_by="XM_016876519.2:66..1721"
                     /db_xref="GeneID:107942800"
ORIGIN      
        1 mapstiiavf flwvgsllmv qggdptisfe wkvtygtisp lgvpvkgili ngqfpgpnin
       61 sttnnnvivn vfnnldepfl ltwsgvqhrk npwqdgvlgt ncpippgtny tykfqvkdqi
      121 gsymyypvtg mhkavggfgg lrinsrllip vpyadpaddy tiiagdffnk ghttlkkile
      181 sgrnlgrcdg vhingkvakg dgsdeplftm eagktykyri cnaglktsln vrfqghnmkl
      241 vemegshtvq ndyesldvhv gqcfsvlvta dqepkdyfvv astrftkqev tatgvirytn
      301 gkgapspklp pppvgwawsl nqfrtfrwnl tasaarpnpq gsykygsvni trtiklanta
      361 qkvdgklrya ingasyvept tplklaeyyg vadkvfkydt ipddppaeit kitmepivln
      421 lthrnfmeii fenretaiqs yhlcgyaffa vavetgqwsp ekrknynlld avsrhtiqvf
      481 pkswaaills fdncgmwnir seiwdrrylg qqlyvsvlsp nkslrdeynm pegalvcgvv
      541 enmprpppay t
//
LOCUS       XP_016732007             550 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_016732007
VERSION     XP_016732007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876518.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..550
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=61555
     Region          1..550
                     /region_name="PLN02354"
                     /note="copper ion binding / oxidoreductase"
                     /db_xref="CDD:177987"
     CDS             1..550
                     /gene="LOC107942799"
                     /coded_by="XM_016876518.2:119..1771"
                     /db_xref="GeneID:107942799"
ORIGIN      
        1 maaevilklt icflalmvgv qggdpylfft wnvtygtisp lgvpqqgili ngqfpgpein
       61 atsnnnivvn vfnnldepfl ltwsgvqhrk nswqdgvlgt ncpiapgtnf tyqfqvkdqi
      121 gsyiyypsta lhraaggfgg lrvhsrllip vpypdpadey tvltgdwyak shkilrgfld
      181 sgrplgrpdg illngkagkv gvkqeplftm epgktykyrv cnvglkasln friqghklkl
      241 vemegshtvq nlyesldvhi gqcfsilvaa dqdpkdyymv astrflkevq tttaiirykn
      301 gkgeastelp papigwawsl nqfrtfrwnl tasaarpnpq gsyrygaini trtirlvnsv
      361 srangklryg fngvshtdpn tplklaeyfn ladkvfkynv ikdepekttt ltiqpnvlnm
      421 tfrnfveiif enhekslqsf hidgysffav avepgtwspe krenynllda vsrhtvqvfp
      481 kswaailltf dnagmwnirs eiwertylge qlyvsvlspe kslrdeynip entplcgivs
      541 glpkpspyti
//
LOCUS       XP_016732015             243 aa            linear   PLN 06-AUG-2024
DEFINITION  RGS1-HXK1-interacting protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016732015
VERSION     XP_016732015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..243
                     /product="RGS1-HXK1-interacting protein 1 isoform X1"
                     /calculated_mol_wt=26912
     CDS             1..243
                     /gene="LOC107942808"
                     /coded_by="XM_016876526.2:124..855"
                     /db_xref="GeneID:107942808"
ORIGIN      
        1 msgeeegrea atatipaans stkpwveelp tienlidskd lairsaqslf hnssthlrtf
       61 qdslpqassy yksyedaffs klkegvmiak enpgaavgit ltaalclmrg prrflfrntl
      121 grfqseeakf sraeknvkvl slsvdlmkke ssklleraal aekdmkrgqk elmnsggqih
      181 rlaksvykve aeavdlmdgl reipgrealk lraevasmas llrqqrvsld rrirkiselg
      241 ipv
//
LOCUS       XP_016732016             238 aa            linear   PLN 06-AUG-2024
DEFINITION  RGS1-HXK1-interacting protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016732016
VERSION     XP_016732016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876527.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..238
                     /product="RGS1-HXK1-interacting protein 1 isoform X2"
                     /calculated_mol_wt=26186
     CDS             1..238
                     /gene="LOC107942808"
                     /coded_by="XM_016876527.2:124..840"
                     /db_xref="GeneID:107942808"
ORIGIN      
        1 msgeeegrea atatipaans stkpwveelp tienlidskd lairsaqslf hnssthlrtf
       61 qdslpqassy yksyedaffs klkegvmiak enpgaavgit ltaalclmrg prrflfrntl
      121 grfqseeakf sraeknvkvl slsvdlmkke ssklleraal aekdmkrgqk elmnsggqih
      181 rlaksvykve aeavdlmdgl reipgrealk lraekftnlt sivgcfngit feaakgft
//
LOCUS       XP_016732017             214 aa            linear   PLN 06-AUG-2024
DEFINITION  RGS1-HXK1-interacting protein 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016732017
VERSION     XP_016732017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876528.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..214
                     /product="RGS1-HXK1-interacting protein 1 isoform X3"
                     /calculated_mol_wt=23637
     CDS             1..214
                     /gene="LOC107942808"
                     /coded_by="XM_016876528.2:124..768"
                     /db_xref="GeneID:107942808"
ORIGIN      
        1 msgeeegrea atatipaans stkpwveelp tienlidskd lairsaqslf hnssthlrtf
       61 qdslpqassy yksyedaffs klkegvmiak enpgaavgit ltaalclmrg prrflfrntl
      121 grfqseeakf sraeknvkvl slsvdlmkke ssklleraal aekdmkrgqk elmnsggqih
      181 rlaksvykve aeavdlmdgl reipgrealk lrae
//
LOCUS       XP_040941731             372 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SIRP1 [Gossypium hirsutum].
ACCESSION   XP_040941731
VERSION     XP_040941731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085797.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..372
                     /product="E3 ubiquitin-protein ligase SIRP1"
                     /calculated_mol_wt=41579
     Region          9..39
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          243..285
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(244,247,262,264,267,270,281,284)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..372
                     /gene="LOC107942804"
                     /coded_by="XM_041085797.1:271..1389"
                     /db_xref="GeneID:107942804"
ORIGIN      
        1 meeamaenyw cyqcsqvvtp imgieikcpf cqggfieqms sgtrgsedmd sdmgsdrals
       61 lwapillgmi gnprlrrrfd ridfeeenne ndndngegrh egntdldqel esiirrrrrs
      121 satilqllqg irdgmaseve naandrdqgm gtsrdrdrer ervilinpfn qtiivqgpyd
      181 ssqsglsqns nhtrslgdyf mspgldlllq hlaenesnry gtpptqkeai ealptvkiee
      241 mlqcsvcldd lktgnvakem pckhkfhgec ilpwlelhss cpvcryqmpt deskldserp
      301 rantnrresg nnvrgsseeg erdgrngsgr rfsipwpfng lfssgsqssg anssdtssss
      361 qstttsqrde kn
//
LOCUS       XP_040941732             505 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate kinase, cytosolic isozyme [Gossypium hirsutum].
ACCESSION   XP_040941732
VERSION     XP_040941732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085798.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="pyruvate kinase, cytosolic isozyme"
                     /calculated_mol_wt=54502
     Region          1..505
                     /region_name="PLN02461"
                     /note="Probable pyruvate kinase"
                     /db_xref="CDD:215255"
     CDS             1..505
                     /gene="LOC107942803"
                     /coded_by="XM_041085798.1:70..1587"
                     /db_xref="GeneID:107942803"
ORIGIN      
        1 mnndvaigsa vmeskpktki vctlgpscrs vpmiekllka glsvarfnfs hgshdyhqet
       61 ldnlraamin tgifcavmld tkgpeirtgf lkdgkvqlkq geeitittdy gikgdeklis
      121 msykklaedv klgmvilcad gtisftvlsc dlekglvhcr censavlger knvnlpgvvv
      181 dlptltdkdk edilqwgvpn kidmialsfv rkgsdlvevr kvlgehskni llmskvenqe
      241 gvanfddila nsdafmvarg dlgmeipiek iflaqkvmvy kcniqgkpvv tatqmlesmi
      301 ksprptraea tdvanavldg tdcvmlsget aagaypelav qtmakicvea estldyedvf
      361 krimkhspvp mspleslaat avrtansasa alilvltrgg staklvakyr pgkpilsvvv
      421 peimtdsfdw scsderparh slifrglipv lyagsarash eetteealgf aikhaksmgl
      481 ckegdsvval hrigtasvik iltak
//
LOCUS       XP_016732013             606 aa            linear   PLN 06-AUG-2024
DEFINITION  glucosidase 2 subunit beta [Gossypium hirsutum].
ACCESSION   XP_016732013
VERSION     XP_016732013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876524.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..606
                     /product="glucosidase 2 subunit beta"
                     /calculated_mol_wt=68830
     Region          27..181
                     /region_name="PRKCSH-like"
                     /note="Glucosidase II beta subunit-like; pfam12999"
                     /db_xref="CDD:372423"
     Region          257..>455
                     /region_name="PTZ00112"
                     /note="origin recognition complex 1 protein; Provisional"
                     /db_xref="CDD:240274"
     Region          460..606
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein; cl06793"
                     /db_xref="CDD:414904"
     CDS             1..606
                     /gene="LOC107942806"
                     /coded_by="XM_016876524.2:142..1962"
                     /db_xref="GeneID:107942806"
ORIGIN      
        1 mrvysifilf figsflpsss sskhhflgis pqdenyykss sdtisckdgs kkfsksqfnd
       61 dfcdcldgtd epgtsacpta kfycknaghi pqflfssrvn dgicdccdgs deydgqvkcp
      121 nmcweagkva rdrlikkiat ykegaalrkl evekakvaia kkeaeltllk neekvlkvrv
      181 relkehkeli ekeeekvrlq kemeekgkre aeedlkekgk adkegevehe kveeeasten
      241 qptesthddi ignvedsssk ehasenthes aspttddvss vateiaddag skispdvdkk
      301 enevssdise gmsreelgri vasrwtgest knqggnkdha ddsheetpkn thdeqydhha
      361 tdtvvdtgkd dnekydyeid deqdesyeee shddmssyny ddepdlsdtt ssynsswlek
      421 iqqkarnilk afnlfqtpvn lteaatvrkk yvdsgtklsk iqsrisklke klkhdfgpek
      481 efyafyghcf etnqnkyvyk vcpykqasqe egytstslgn wdqfeesyrm mvfsngencw
      541 ngpdrsmkvk lrcglkneit dvdepsrcey vailstpavc ledklkelqh kldlmnkeqp
      601 rehdel
//
LOCUS       XP_040941734             486 aa            linear   PLN 06-AUG-2024
DEFINITION  diacylglycerol kinase 7 [Gossypium hirsutum].
ACCESSION   XP_040941734
VERSION     XP_040941734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085800.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="diacylglycerol kinase 7"
                     /calculated_mol_wt=54441
     Region          89..229
                     /region_name="DAGK_cat"
                     /note="Diacylglycerol kinase catalytic domain; pfam00781"
                     /db_xref="CDD:425868"
     Region          281..458
                     /region_name="DAGK_acc"
                     /note="Diacylglycerol kinase accessory domain; pfam00609"
                     /db_xref="CDD:459866"
     CDS             1..486
                     /gene="LOC121212631"
                     /coded_by="XM_041085800.1:217..1677"
                     /db_xref="GeneID:121212631"
ORIGIN      
        1 mnspttards ssptrivars smtdwiracg lsglagmkid keelrrrlsm pqylrlamld
       61 sikkkdvdgg dehfrsrssd ydatvpqspi vvfinsrsgg rhgpvlkerl qqliseeqvf
      121 dlldvkphef vryglaclek wgnngdicak etrrnirvvv aggdgtvgwv lgclgelhqk
      181 grdpvppvav iplgtgndls rsygwggsfp fawksaikrt lhqattgpic rldswhvvlq
      241 mpggevidpp hslkatedch fdqtleidgg ipdkvncyeg vfynyfsigm daqvaygfhh
      301 lrnekpylaq gpitnkiiys sysctqgwfl tpcvsdpslr glknilriyi kkarcseweq
      361 ipvprsvrai valnlhnygs grnpwgklkp eylekrgfve ahaddgllei fglkqgwhas
      421 fvmvelisak hiaqassirl eirggewkdv fmqmdgepwk qpmssdhstf leikrvpyqs
      481 lminre
//
LOCUS       XP_040941735             167 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GLUTAMINE DUMPER 2 [Gossypium hirsutum].
ACCESSION   XP_040941735
VERSION     XP_040941735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085801.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..167
                     /product="protein GLUTAMINE DUMPER 2"
                     /calculated_mol_wt=17596
     CDS             1..167
                     /gene="LOC121212632"
                     /coded_by="XM_041085801.1:73..576"
                     /db_xref="GeneID:121212632"
ORIGIN      
        1 mearephntt arthsgvnse lhtspwhspv pylfgglaam lgliafallv lacsywkllg
       61 ynendgeggt erdleagegk geagrpamep kvlvimagek kptflatpig sngsyyfgdn
      121 sekrcccsdq kgeegkqdek evcrggdggg dggaettvtq qsssddh
//
LOCUS       XP_040941736             295 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein CONSTANS-LIKE 5 [Gossypium hirsutum].
ACCESSION   XP_040941736
VERSION     XP_040941736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085802.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..295
                     /product="zinc finger protein CONSTANS-LIKE 5"
                     /calculated_mol_wt=32516
     Region          39..81
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          <236..259
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     CDS             1..295
                     /gene="LOC121212633"
                     /coded_by="XM_041085802.1:83..970"
                     /db_xref="GeneID:121212633"
ORIGIN      
        1 maakhsdack ptatdpdfmc lsydsstaih gcigrvlmcd vceqvpaaft ckadaaalcv
       61 acdadihsan hlarrhyrvp idpflgpqke dvvvmgswsl lpgfnhklve tedlgisemd
      121 pfidleyqdg yhvlqhhnlg meslvpvqie pattvpvvnp ihfcqsqsls hsvssssvel
      181 gdgnslsdis cplrgtttdp silicnnqvd qvgsmdrvar vlryrekrkk rkfektvrya
      241 srkayaesrp rikgrfvkrt qihnrvdhlc nsatspssst ttshthyygi vpsfl
//
LOCUS       XP_040941737             302 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB36 [Gossypium hirsutum].
ACCESSION   XP_040941737
VERSION     XP_040941737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085803.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..302
                     /product="transcription factor MYB36"
                     /calculated_mol_wt=33462
     Region          1..>150
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..302
                     /gene="LOC121212635"
                     /coded_by="XM_041085803.1:40..948"
                     /db_xref="GeneID:121212635"
ORIGIN      
        1 mgrapccdka nvkkgpwspe edaklkayie khgtrggnwi alphkiglkr cgkscrlrwl
       61 nylrpnikhg gfseeednii cnlylsigsr wsiiaaqlpg rtdndiknyw ntklkkkllg
      121 rhkqsdintk lsdhsnnnnn qftqgltnsa merlqlhlql qalqnpifsf ynnpalwpni
      181 lplqqkvtiq gasngstpni vmesaaaatt pltgdtlvds kpvamgplvs sfrqgevvde
      241 fvvvedggqm aevdgfdglk dnmvwwsngf dakvgssncw gsassvvqfn emfkdyelgf
      301 nm
//
LOCUS       XP_040941738             858 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid
            aminotransferase, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941738
VERSION     XP_040941738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085804.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..858
                     /product="bifunctional dethiobiotin
                     synthetase/7,8-diamino-pelargonic acid aminotransferase,
                     mitochondrial"
                     /calculated_mol_wt=95591
     Region          34..846
                     /region_name="PLN02974"
                     /note="adenosylmethionine-8-amino-7-oxononanoate
                     transaminase"
                     /db_xref="CDD:215526"
     CDS             1..858
                     /gene="LOC121212636"
                     /coded_by="XM_041085804.1:90..2666"
                     /db_xref="GeneID:121212636"
ORIGIN      
        1 mllrrhhhhr lfrlrllllh hhhhqfqsfs tltiplshpt yiiwssntsl gktlvstgls
       61 ssfllspsss skkflylkpl qtgfpsdsds rflfqklssl slsrnlplfs shsvllsslp
      121 aaksfkpnef slnesremce lgfyeekkvl eagrvapelv setiyawega lsphfaaere
      181 ggavedselv krletrlkeg lleggvergk ldgfcvveta ggvaspgpsg tlqcdlyrpl
      241 rfpgvlvgdg rlggisgtis ayeslklrgy dvvaiviedh glineiplks ylrsrvpvfv
      301 lppipqdpsn dlmewfdesc nvfnslkdim leaylermrr lnemprkagd vfwwpftqhk
      361 lvppstvtvi dsrcgenfsv ykvqnkeyit qqfdacasww tqgpdatlqt elardmgyaa
      421 arfghvmfpe nvyepaleca ellldgvgkg watrvyfsdn gstaieialk mafrkfssdh
      481 gilpellknn ptesctelmv lalkgsyhgd tlgameaqap ssftgflqqp wytgrglfld
      541 pptvfmhngk wtvslpevfh satlkpedtt frsrdeiflk srdesnlagl yslyvsqqls
      601 qystlsetnk qigalimepi iqgaggmhmv dplfqrmlvn ecrhcripvi fdevftgfwr
      661 lgvesaaell gcvpdiacfa klmtggiipl aatmatdaif dsftgdsklk allhghsysa
      721 hamgctaaak sikwfkdpnt nlnitseksq kmllrelwda elvqqfsshp sisrvvtlgt
      781 lfalelqade sdagyaslya rslvqmlred ciytrplgnv iyvmcgpcts pkmctlqllk
      841 lytkleeftl vktkmnii
//
LOCUS       XP_040941739             858 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid
            aminotransferase, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941739
VERSION     XP_040941739.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085805.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..858
                     /product="bifunctional dethiobiotin
                     synthetase/7,8-diamino-pelargonic acid aminotransferase,
                     mitochondrial"
                     /calculated_mol_wt=95591
     Region          34..846
                     /region_name="PLN02974"
                     /note="adenosylmethionine-8-amino-7-oxononanoate
                     transaminase"
                     /db_xref="CDD:215526"
     CDS             1..858
                     /gene="LOC121212636"
                     /coded_by="XM_041085805.1:90..2666"
                     /db_xref="GeneID:121212636"
ORIGIN      
        1 mllrrhhhhr lfrlrllllh hhhhqfqsfs tltiplshpt yiiwssntsl gktlvstgls
       61 ssfllspsss skkflylkpl qtgfpsdsds rflfqklssl slsrnlplfs shsvllsslp
      121 aaksfkpnef slnesremce lgfyeekkvl eagrvapelv setiyawega lsphfaaere
      181 ggavedselv krletrlkeg lleggvergk ldgfcvveta ggvaspgpsg tlqcdlyrpl
      241 rfpgvlvgdg rlggisgtis ayeslklrgy dvvaiviedh glineiplks ylrsrvpvfv
      301 lppipqdpsn dlmewfdesc nvfnslkdim leaylermrr lnemprkagd vfwwpftqhk
      361 lvppstvtvi dsrcgenfsv ykvqnkeyit qqfdacasww tqgpdatlqt elardmgyaa
      421 arfghvmfpe nvyepaleca ellldgvgkg watrvyfsdn gstaieialk mafrkfssdh
      481 gilpellknn ptesctelmv lalkgsyhgd tlgameaqap ssftgflqqp wytgrglfld
      541 pptvfmhngk wtvslpevfh satlkpedtt frsrdeiflk srdesnlagl yslyvsqqls
      601 qystlsetnk qigalimepi iqgaggmhmv dplfqrmlvn ecrhcripvi fdevftgfwr
      661 lgvesaaell gcvpdiacfa klmtggiipl aatmatdaif dsftgdsklk allhghsysa
      721 hamgctaaak sikwfkdpnt nlnitseksq kmllrelwda elvqqfsshp sisrvvtlgt
      781 lfalelqade sdagyaslya rslvqmlred ciytrplgnv iyvmcgpcts pkmctlqllk
      841 lytkleeftl vktkmnii
//
LOCUS       XP_040941740             643 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-binding protein 60 C [Gossypium hirsutum].
ACCESSION   XP_040941740
VERSION     XP_040941740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085806.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..643
                     /product="calmodulin-binding protein 60 C"
                     /calculated_mol_wt=72265
     Region          97..244
                     /region_name="Calmodulin_bind"
                     /note="Calmodulin binding protein-like N-terminal domain;
                     pfam07887"
                     /db_xref="CDD:462302"
     Region          256..322
                     /region_name="Calmod_bind_M"
                     /note="Calmodulin binding protein central domain;
                     pfam20451"
                     /db_xref="CDD:466600"
     Region          327..389
                     /region_name="Calmod_bind_C"
                     /note="Calmodulin binding protein C-terminal domain;
                     pfam20452"
                     /db_xref="CDD:466601"
     CDS             1..643
                     /gene="LOC121212637"
                     /coded_by="XM_041085806.1:36..1967"
                     /db_xref="GeneID:121212637"
ORIGIN      
        1 mqrqtrymtr tnsmvrgkrs legdedqqpe pkrpalasvi vealkvdslq klcsslepil
       61 rrvvseever alaklapprl ngrsspkcle gpgggslqlr frsrlslply tggkvegeqg
      121 aaihivlvds ntghvvttgp easmkldvvv legdftnedd edwtqeefds hlvkerpgkr
      181 plltgdlqvt lkegvgtlgd ltftdnsswi rsrkfrlglk vvsgycegir vreakteaft
      241 vkdhrgelyk khyppslnde vwrlekigkd gsfhkrlsae giftvedflr lvvrdqqklr
      301 nilgsgmsnk mwealldhak tcvlsgklyv yytddlrnsg vvfnniyeln glisgeqyfp
      361 adslsdsqkv yvdslvkkay dnwnqvieyd gksllnfkqn rwssardelq igeldytsav
      421 dhqmqlprvp vpvpteqvhs glqvggyndn qstgysgqsq imnpnshnqf gntqfvpqdq
      481 lidnsqqpqs skndtnvvgl algppqssii gfqnigssmq psnlnpfndw tnnhdkgved
      541 flseeeirvr snemleneem qhllrlfnmg gnasinmted sgygfpnyip spmpnfvded
      601 rsrpgkavvg wlkikaamrw gffirkkaae rraqivelee eee
//
LOCUS       XP_040941741             643 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-binding protein 60 C [Gossypium hirsutum].
ACCESSION   XP_040941741
VERSION     XP_040941741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085807.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..643
                     /product="calmodulin-binding protein 60 C"
                     /calculated_mol_wt=72265
     Region          97..244
                     /region_name="Calmodulin_bind"
                     /note="Calmodulin binding protein-like N-terminal domain;
                     pfam07887"
                     /db_xref="CDD:462302"
     Region          256..322
                     /region_name="Calmod_bind_M"
                     /note="Calmodulin binding protein central domain;
                     pfam20451"
                     /db_xref="CDD:466600"
     Region          327..389
                     /region_name="Calmod_bind_C"
                     /note="Calmodulin binding protein C-terminal domain;
                     pfam20452"
                     /db_xref="CDD:466601"
     CDS             1..643
                     /gene="LOC121212637"
                     /coded_by="XM_041085807.1:207..2138"
                     /db_xref="GeneID:121212637"
ORIGIN      
        1 mqrqtrymtr tnsmvrgkrs legdedqqpe pkrpalasvi vealkvdslq klcsslepil
       61 rrvvseever alaklapprl ngrsspkcle gpgggslqlr frsrlslply tggkvegeqg
      121 aaihivlvds ntghvvttgp easmkldvvv legdftnedd edwtqeefds hlvkerpgkr
      181 plltgdlqvt lkegvgtlgd ltftdnsswi rsrkfrlglk vvsgycegir vreakteaft
      241 vkdhrgelyk khyppslnde vwrlekigkd gsfhkrlsae giftvedflr lvvrdqqklr
      301 nilgsgmsnk mwealldhak tcvlsgklyv yytddlrnsg vvfnniyeln glisgeqyfp
      361 adslsdsqkv yvdslvkkay dnwnqvieyd gksllnfkqn rwssardelq igeldytsav
      421 dhqmqlprvp vpvpteqvhs glqvggyndn qstgysgqsq imnpnshnqf gntqfvpqdq
      481 lidnsqqpqs skndtnvvgl algppqssii gfqnigssmq psnlnpfndw tnnhdkgved
      541 flseeeirvr snemleneem qhllrlfnmg gnasinmted sgygfpnyip spmpnfvded
      601 rsrpgkavvg wlkikaamrw gffirkkaae rraqivelee eee
//
LOCUS       XP_016733499             171 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH146 [Gossypium hirsutum].
ACCESSION   XP_016733499
VERSION     XP_016733499.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878010.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016733499.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..171
                     /product="transcription factor bHLH146"
                     /calculated_mol_wt=19542
     Region          <123..168
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(125,128..129,132,142..143,147..148,151,154,157..158,
                     161,164..165,167..168)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..171
                     /gene="LOC107944181"
                     /coded_by="XM_016878010.2:186..701"
                     /db_xref="GeneID:107944181"
ORIGIN      
        1 mlklymlvfc kqvgmesyer krtypmkssk vihsttfttk yvsylvpalt nigsllasyd
       61 vdeetkkmvr yevdmalals akgfawsral khklrlnynd ddrvgdghge pvtkkpkteh
      121 eeeermmclr klipggkemm addemllsel gsyvsclelq vnilrsmlqn n
//
LOCUS       XP_040941742             731 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ROLLING AND ERECT LEAF 2 [Gossypium hirsutum].
ACCESSION   XP_040941742
VERSION     XP_040941742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085808.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..731
                     /product="protein ROLLING AND ERECT LEAF 2"
                     /calculated_mol_wt=81445
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          325..642
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..731
                     /gene="LOC107944183"
                     /coded_by="XM_041085808.1:222..2417"
                     /db_xref="GeneID:107944183"
ORIGIN      
        1 mgcstskldd eeavqlckdr knfikqaveq rtrfatghla yiqslkrvsa alqdyvegde
       61 cheflldsfi tppftpvkkg spgfisiqsn pkstlkvsyl rsggnpavav eerpqspetv
      121 rvqayspvhh ygmdgifamq sspmnnssff tyspnnrpni pppspqssqw dffwnpfssl
      181 dyygypnrss ldqavmdddv rglgqvreee gipdleedet eheesenkvn sveekakiht
      241 nynreevtve dvdeddedee eidmaetehd vkdvqpqrkv svevvrsqta gevevsnket
      301 avgsseakee tpgftvyvnr rptsmaevin dldaqfmvac daasevsgml easraqysst
      361 sneltgmkml npvallrsas srssssrflm nssssreagy essssvsees cmfhgshqst
      421 ldrlyawekk lyeevksgek triayekksr qlrnqdvkgd dpsvvdktra airdlhtqmk
      481 vsihsveais krietlrdee lqpqllelvh glarmwkvma echqaqkrtl deaklllaga
      541 pskleakrqs sisaaanlea elrnwracfe swivsqrsyl ralsgwllrc lrpdpdtskl
      601 pfsprrssgt lvifglciqw srfldatret pvldgidffa agmgslysqq lreesrvgsk
      661 rfapgenmel vnidevgdvm ttekfsdvav rvlcagmsva msslsefais sadgyaelis
      721 klpqtsngsg m
//
LOCUS       XP_040941743             326 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 3, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941743
VERSION     XP_040941743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085809.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="multiple organellar RNA editing factor 3,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=36994
     CDS             1..326
                     /gene="LOC121212639"
                     /coded_by="XM_041085809.1:180..1160"
                     /db_xref="GeneID:121212639"
ORIGIN      
        1 mafvnarrcl stllsralts ssssssfpfr srltatllnk tpvfipeatk iltrtktsgs
       61 gystssdlsr spaafldgvd yehwliilef perpqplkee midtyvktla svvgseeeak
      121 kriysvcttl ytgfraffsk dliyelrglp rvrwvlsiey lddedsffeg dmfvdgkvlr
      181 rqqilpalsn thfavgrddd lwvipfqfpe dqepslgeei dlyvktlasv vgseeeakkr
      241 iyavssatsw ytgfrafisk kmahelsgir dseneypned vhggicllmg ksfldqpfre
      301 cnnrvwetvg itkfrtgpdt yrylyl
//
LOCUS       XP_040941744             304 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 3, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941744
VERSION     XP_040941744.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085810.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="multiple organellar RNA editing factor 3,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=34326
     CDS             1..304
                     /gene="LOC121212639"
                     /coded_by="XM_041085810.1:180..1094"
                     /db_xref="GeneID:121212639"
ORIGIN      
        1 mafvnarrcl stllsralts ssssssfpfr srltatllnk tpvfipeatk iltrtktsgs
       61 gystssdlsr spaafldgvd yehwliilef perpqplkee midtyvktla svvgseeeak
      121 kriysvcttl ytgfraffsk dliyelrgdm fvdgkvlrrq qilpalsnth favgrdddlw
      181 vipfqfpedq epslgeeidl yvktlasvvg seeeakkriy avssatswyt gfrafiskkm
      241 ahelsgirds eneypnedvh ggicllmgks fldqpfrecn nrvwetvgit kfrtgpdtyr
      301 ylyl
//
LOCUS       XP_040941745             290 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 3, mitochondrial isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941745
VERSION     XP_040941745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085811.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..290
                     /product="multiple organellar RNA editing factor 3,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=33173
     CDS             1..290
                     /gene="LOC121212639"
                     /coded_by="XM_041085811.1:180..1052"
                     /db_xref="GeneID:121212639"
ORIGIN      
        1 mafvnarrcl stllsralts ssssssfpfr srltatllnk tpvfipeatk iltrtktsgs
       61 gystssdlsr spaafldgvd yehwliilef perpqplkee midtyvktla svvgseeeak
      121 kriysvcttl ytgfraffsk dliyelrglp rvrwvlsiey lddedsffeg dmfvdgkvlr
      181 rqqilpalsn thfavgrddd lwvipfqfpe dqepslgeei dlyvktlasv vvkrkrkrey
      241 tlflvqhrgi lgfvllflrr wlmnfqgfgi qktnirtkmc mevgslknsr
//
LOCUS       XP_040941746             286 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 3, mitochondrial isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040941746
VERSION     XP_040941746.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085812.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..286
                     /product="multiple organellar RNA editing factor 3,
                     mitochondrial isoform X4"
                     /calculated_mol_wt=32782
     CDS             1..286
                     /gene="LOC121212639"
                     /coded_by="XM_041085812.1:180..1040"
                     /db_xref="GeneID:121212639"
ORIGIN      
        1 mafvnarrcl stllsralts ssssssfpfr srltatllnk tpvfipeatk iltrtktsgs
       61 gystssdlsr spaafldgvd yehwliilef perpqplkee midtyvktla svvgseeeak
      121 kriysvcttl ytgfraffsk dliyelrglp rvrwvlsiey lddedsffeg dmfvdgkvlr
      181 rqqilpalsn thfavgrddd lwvipfqfpe dqepslgeei dlyvktlasv vvkrkrkrey
      241 tlflvqhrgi lgfvllflrr wlmnfqgfgi qktnirtkmc meefac
//
LOCUS       XP_040941747             358 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040941747
VERSION     XP_040941747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085813.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="multiple organellar RNA editing factor 3,
                     mitochondrial"
                     /calculated_mol_wt=39973
     CDS             1..358
                     /gene="LOC121212641"
                     /coded_by="XM_041085813.1:392..1468"
                     /db_xref="GeneID:121212641"
ORIGIN      
        1 maclnarrsl stllsralts sssfpscsrl tvallnstpv fipeatkilt rtktsgsgys
       61 plndpspnws npppnvdyeh wliilefsrr pkpseeemid ayvktlasvv gseeeakkri
      121 ysvcttrytg fraffpglsi ydviglprvr wvlpaefigs qdyyfggdlf vdgkvlrrpq
      181 lsprvgvsns shrvggrgdd dlwvitfrfp kdqepslqeq idlyvktlas vvgseeeakk
      241 riyavssats wytgfrafis eemahelsgl plvegfyrds evqhrnedic gghllvdgev
      301 vlrptlskmq ppkvghlvgl idflqeqild visdrnlsde tvfdsimead mvqrmtaf
//
LOCUS       XP_040941748             358 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 3, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040941748
VERSION     XP_040941748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085814.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="multiple organellar RNA editing factor 3,
                     mitochondrial"
                     /calculated_mol_wt=39973
     CDS             1..358
                     /gene="LOC121212641"
                     /coded_by="XM_041085814.1:380..1456"
                     /db_xref="GeneID:121212641"
ORIGIN      
        1 maclnarrsl stllsralts sssfpscsrl tvallnstpv fipeatkilt rtktsgsgys
       61 plndpspnws npppnvdyeh wliilefsrr pkpseeemid ayvktlasvv gseeeakkri
      121 ysvcttrytg fraffpglsi ydviglprvr wvlpaefigs qdyyfggdlf vdgkvlrrpq
      181 lsprvgvsns shrvggrgdd dlwvitfrfp kdqepslqeq idlyvktlas vvgseeeakk
      241 riyavssats wytgfrafis eemahelsgl plvegfyrds evqhrnedic gghllvdgev
      301 vlrptlskmq ppkvghlvgl idflqeqild visdrnlsde tvfdsimead mvqrmtaf
//
LOCUS       XP_016733068             422 aa            linear   PLN 06-AUG-2024
DEFINITION  IQ domain-containing protein IQM2 [Gossypium hirsutum].
ACCESSION   XP_016733068
VERSION     XP_016733068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..422
                     /product="IQ domain-containing protein IQM2"
                     /calculated_mol_wt=47666
     CDS             1..422
                     /gene="LOC107943771"
                     /coded_by="XM_016877579.2:223..1491"
                     /db_xref="GeneID:107943771"
ORIGIN      
        1 mgvavsspla kpsdvkngiq svtvksihfd edeaktlvrs isynsldpep lilisvgskn
       61 mvsegsvsfk gldleqsvsa ksppldkpen vpikavietp kqspvfgpsn pqheaairlq
      121 kvyksfrtrr kladcavlve qtwwklldfa elkrssisff digkhetais rwsrartraa
      181 kvgkglskne kaqklalqhw leaidprhry ghnlhfyynq wlhsqskepf fywldigegk
      241 evniekcprs klqlqcikyl spierkpyev mvvngkfvyk qtgkpvhtie etgdakwifv
      301 lntskilyvg vkkkgtfqhs sflaggatia agrlvvdngi lkavwphsgh yrpleenfnd
      361 fvsflrennv dlnnvkmtpv deegnlankq rnsnhfrcns seddfnfean einakdsidq
      421 ir
//
LOCUS       XP_040941749             738 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-activating enzyme 18, peroxisomal isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941749
VERSION     XP_040941749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085815.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..738
                     /product="probable acyl-activating enzyme 18, peroxisomal
                     isoform X1"
                     /calculated_mol_wt=81617
     Region          7..738
                     /region_name="PLN03052"
                     /note="acetate--CoA ligase; Provisional"
                     /db_xref="CDD:215553"
     CDS             1..738
                     /gene="LOC107943773"
                     /coded_by="XM_041085815.1:82..2298"
                     /db_xref="GeneID:107943773"
ORIGIN      
        1 mtttatakti nevgiddlyr agggiltide tkhihqiikq aiskakrsrl satevwkevl
       61 gkkvlksnhp hslhqlvyys vyanwdtsin gpplywfpsl qdskltnlgk imeilgpkll
      121 gtsykdpias fnlfreytvr hpevywsiil kelsvtfhep pkcildttdk srpggtwlpg
      181 svlniaeccl lpsihprked dscaivwrde gddddsdvnr itlkqlreqv ilvanaldrt
      241 ftkgdaiavd mpmtvnavii ylaiilagcv vvsiadsfaa keiatrlrvs kakaiftqyf
      301 ivrggrkfpl ysrvveasph kvivlpvsgh nvgvqlreqd iswkdflayd nqhqrpihft
      361 paylpvdsmi nilfssgttg epkaipwtql sairstaegw ahinvgvgdv ycwptnlgwv
      421 mgpillfscf ltgatlalyh gsplgrgfgk fvqdagvtvl gtvpslvktw kntdcikgld
      481 wtkiksfast getsnvdddl wlssksyykp iieccggtel assyiqsslf qpqafgafst
      541 asmttglvil dehgvpypdd kacvgevglf plylgatdrl lnadhndvyf kgmptfkgmr
      601 lrrhgdilkr tvggyivvqg raddtmnlgg iktssveier vcdrsdesil etaavsvapp
      661 dggpellvif vvlkkgfnqq peklktifsk tiqtnlnplf kvsnvkiipe fprtasnkll
      721 rrvlrdqiqh elsvrsrm
//
LOCUS       XP_040941750             697 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-activating enzyme 18, peroxisomal isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941750
VERSION     XP_040941750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085816.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..697
                     /product="probable acyl-activating enzyme 18, peroxisomal
                     isoform X2"
                     /calculated_mol_wt=76849
     Region          7..697
                     /region_name="PLN03052"
                     /note="acetate--CoA ligase; Provisional"
                     /db_xref="CDD:215553"
     CDS             1..697
                     /gene="LOC107943773"
                     /coded_by="XM_041085816.1:82..2175"
                     /db_xref="GeneID:107943773"
ORIGIN      
        1 mtttatakti nevgiddlyr agggiltide tkhihqiikq aiskakrsrl satevwkevl
       61 dskltnlgki meilgpkllg tsykdpiasf nlfreytvrh pevywsiilk elsvtfhepp
      121 kcildttdks rpggtwlpgs vlniaeccll psihprkedd scaivwrdeg ddddsdvnri
      181 tlkqlreqvi lvanaldrtf tkgdaiavdm pmtvnaviiy laiilagcvv vsiadsfaak
      241 eiatrlrvsk akaiftqyfi vrggrkfply srvveasphk vivlpvsghn vgvqlreqdi
      301 swkdflaydn qhqrpihftp aylpvdsmin ilfssgttge pkaipwtqls airstaegwa
      361 hinvgvgdvy cwptnlgwvm gpillfscfl tgatlalyhg splgrgfgkf vqdagvtvlg
      421 tvpslvktwk ntdcikgldw tkiksfastg etsnvdddlw lssksyykpi ieccggtela
      481 ssyiqsslfq pqafgafsta smttglvild ehgvpypddk acvgevglfp lylgatdrll
      541 nadhndvyfk gmptfkgmrl rrhgdilkrt vggyivvqgr addtmnlggi ktssveierv
      601 cdrsdesile taavsvappd ggpellvifv vlkkgfnqqp eklktifskt iqtnlnplfk
      661 vsnvkiipef prtasnkllr rvlrdqiqhe lsvrsrm
//
LOCUS       XP_040941751             673 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-activating enzyme 18, peroxisomal isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941751
VERSION     XP_040941751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085817.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..673
                     /product="probable acyl-activating enzyme 18, peroxisomal
                     isoform X3"
                     /calculated_mol_wt=74594
     Region          37..673
                     /region_name="PLN03052"
                     /note="acetate--CoA ligase; Provisional"
                     /db_xref="CDD:215553"
     CDS             1..673
                     /gene="LOC107943773"
                     /coded_by="XM_041085817.1:167..2188"
                     /db_xref="GeneID:107943773"
ORIGIN      
        1 mkpntstksl nkpflklkea dyqqqrcgkr cwvrrqdskl tnlgkimeil gpkllgtsyk
       61 dpiasfnlfr eytvrhpevy wsiilkelsv tfheppkcil dttdksrpgg twlpgsvlni
      121 aeccllpsih prkeddscai vwrdegdddd sdvnritlkq lreqvilvan aldrtftkgd
      181 aiavdmpmtv naviiylaii lagcvvvsia dsfaakeiat rlrvskakai ftqyfivrgg
      241 rkfplysrvv easphkvivl pvsghnvgvq lreqdiswkd flaydnqhqr pihftpaylp
      301 vdsminilfs sgttgepkai pwtqlsairs taegwahinv gvgdvycwpt nlgwvmgpil
      361 lfscfltgat lalyhgsplg rgfgkfvqda gvtvlgtvps lvktwkntdc ikgldwtkik
      421 sfastgetsn vdddlwlssk syykpiiecc ggtelassyi qsslfqpqaf gafstasmtt
      481 glvildehgv pypddkacvg evglfplylg atdrllnadh ndvyfkgmpt fkgmrlrrhg
      541 dilkrtvggy ivvqgraddt mnlggiktss veiervcdrs desiletaav svappdggpe
      601 llvifvvlkk gfnqqpeklk tifsktiqtn lnplfkvsnv kiipefprta snkllrrvlr
      661 dqiqhelsvr srm
//
LOCUS       XP_040941752             627 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-activating enzyme 18, peroxisomal isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040941752
VERSION     XP_040941752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085818.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..627
                     /product="probable acyl-activating enzyme 18, peroxisomal
                     isoform X4"
                     /calculated_mol_wt=69174
     Region          1..627
                     /region_name="PLN03052"
                     /note="acetate--CoA ligase; Provisional"
                     /db_xref="CDD:215553"
     CDS             1..627
                     /gene="LOC107943773"
                     /coded_by="XM_041085818.1:197..2080"
                     /db_xref="GeneID:107943773"
ORIGIN      
        1 meilgpkllg tsykdpiasf nlfreytvrh pevywsiilk elsvtfhepp kcildttdks
       61 rpggtwlpgs vlniaeccll psihprkedd scaivwrdeg ddddsdvnri tlkqlreqvi
      121 lvanaldrtf tkgdaiavdm pmtvnaviiy laiilagcvv vsiadsfaak eiatrlrvsk
      181 akaiftqyfi vrggrkfply srvveasphk vivlpvsghn vgvqlreqdi swkdflaydn
      241 qhqrpihftp aylpvdsmin ilfssgttge pkaipwtqls airstaegwa hinvgvgdvy
      301 cwptnlgwvm gpillfscfl tgatlalyhg splgrgfgkf vqdagvtvlg tvpslvktwk
      361 ntdcikgldw tkiksfastg etsnvdddlw lssksyykpi ieccggtela ssyiqsslfq
      421 pqafgafsta smttglvild ehgvpypddk acvgevglfp lylgatdrll nadhndvyfk
      481 gmptfkgmrl rrhgdilkrt vggyivvqgr addtmnlggi ktssveierv cdrsdesile
      541 taavsvappd ggpellvifv vlkkgfnqqp eklktifskt iqtnlnplfk vsnvkiipef
      601 prtasnkllr rvlrdqiqhe lsvrsrm
//
LOCUS       XP_040941753             330 aa            linear   PLN 06-AUG-2024
DEFINITION  feruloyl CoA ortho-hydroxylase F6H1-3 [Gossypium hirsutum].
ACCESSION   XP_040941753
VERSION     XP_040941753.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085819.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..330
                     /product="feruloyl CoA ortho-hydroxylase F6H1-3"
                     /calculated_mol_wt=37319
     Region          2..320
                     /region_name="PLN03178"
                     /note="leucoanthocyanidin dioxygenase; Provisional"
                     /db_xref="CDD:215614"
     CDS             1..330
                     /gene="LOC107943772"
                     /coded_by="XM_041085819.1:137..1129"
                     /db_xref="GeneID:107943772"
ORIGIN      
        1 mglkappkpy iqpleerlci skivpqqsip iidmshwknp qvasavcdaa ekwgffqivn
       61 hdvpvevldn vkdatyrffd lpadqknkys kensasnnvr fgtsfspeae kslewkdyls
      121 lffvseeeas mlwppvcreq vldyirrtev vikkllqmlm eglnvkeide tkrsllmgsi
      181 rtnlnyypic pdpeltvgvg rhfdvstlti llqdeiggly vrgnqgdgdn wihvppikgs
      241 lvinvgdalq ilsnsqyksv ehrviangtk nrisvpifvn pkptdiigpl vevlqngekp
      301 iykqvlysdh vkhffrkahd gkktvefaei
//
LOCUS       XP_040941754             312 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP2A catalytic subunit
            [Gossypium hirsutum].
ACCESSION   XP_040941754
VERSION     XP_040941754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085820.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..312
                     /product="serine/threonine-protein phosphatase PP2A
                     catalytic subunit"
                     /calculated_mol_wt=35559
     Region          12..296
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(54,70,73..74,76..77,79,81..82,94,109..113,124..125,
                     128..129,133..134,137..138,146,271,280,290,296)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(60,62,88,92,120..121,125..126,130,170,192..194,203,
                     216..218,244,246,270..272)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(60,62,88,120,170,244)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..312
                     /gene="LOC107945545"
                     /coded_by="XM_041085820.1:151..1089"
                     /db_xref="GeneID:107945545"
ORIGIN      
        1 meslvglnsh dnldkqisql mqckplseqe ikllcdkake ilrdesnvqp vkspvticgd
       61 ihgqfhdlae lfriggkcpd tnylfmgdyv drgyysvetv tllvaikary pqritilrgn
      121 hesrqitqvy gfydeclrky gtanvwktft dlfdyfplta lveseifclh gglspaietl
      181 dnirnfdrvq evphegpmcd llwsdpddrc gwgisprgag ytfgqdiseq fnhknslkli
      241 arahqlvmeg fnwgheqnvv tifsapnycy rcgnmasile vddckahtfi qfepaprrge
      301 pdvtrrtpey fl
//
LOCUS       XP_016735045             603 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 37 [Gossypium hirsutum].
ACCESSION   XP_016735045
VERSION     XP_016735045.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016735045.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..603
                     /product="DEAD-box ATP-dependent RNA helicase 37"
                     /calculated_mol_wt=65294
     Region          151..530
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..603
                     /gene="LOC107945507"
                     /coded_by="XM_016879556.2:299..2110"
                     /db_xref="GeneID:107945507"
ORIGIN      
        1 mttrtswadm aansaaenvg sgsssasnsk pvyvpphlrn rppsadppap tstgpassnd
       61 rpgqggsrwa aprsdygnrs gygggggrlg gwggrggwdr grdrevnpfg nddadteqaf
      121 seqentainf dayedipvet sgdnvpppvn tfaeidlgda lnlnirrcky vkptpvqrha
      181 ipialagrdl macaqtgsgk taafcfpiis gimrgqvpqk plrgartvfp lalilsptre
      241 lsmqiheear kfsyqtgvkv vvayggapin qqlrdlergv dilvatpgrl vdllerarvs
      301 lqmirylald eadrmldmgf epqirkiveq mdmpppgvrq tmlfsatfpr eiqrlasdfl
      361 anyiflavgr vgsstdlivq rvefvhesdk rshlmdllha qrangvqgkq altlvfvetk
      421 kgadslehwl cmngfpatti hgdrsqqere qalrsfktga tpilvatdva argldiphva
      481 hvvnfdlpnd iddyvhrigr tgragktgla taffnenntn makaladlmq eanqevpawl
      541 tryaarsfga rnrrpggggr fggrdfrrds synrggsdyy sggnnnsggy gggyganvas
      601 awd
//
LOCUS       XP_016735038             603 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 37 [Gossypium hirsutum].
ACCESSION   XP_016735038
VERSION     XP_016735038.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879549.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016735038.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..603
                     /product="DEAD-box ATP-dependent RNA helicase 37"
                     /calculated_mol_wt=65294
     Region          151..530
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..603
                     /gene="LOC107945507"
                     /coded_by="XM_016879549.2:455..2266"
                     /db_xref="GeneID:107945507"
ORIGIN      
        1 mttrtswadm aansaaenvg sgsssasnsk pvyvpphlrn rppsadppap tstgpassnd
       61 rpgqggsrwa aprsdygnrs gygggggrlg gwggrggwdr grdrevnpfg nddadteqaf
      121 seqentainf dayedipvet sgdnvpppvn tfaeidlgda lnlnirrcky vkptpvqrha
      181 ipialagrdl macaqtgsgk taafcfpiis gimrgqvpqk plrgartvfp lalilsptre
      241 lsmqiheear kfsyqtgvkv vvayggapin qqlrdlergv dilvatpgrl vdllerarvs
      301 lqmirylald eadrmldmgf epqirkiveq mdmpppgvrq tmlfsatfpr eiqrlasdfl
      361 anyiflavgr vgsstdlivq rvefvhesdk rshlmdllha qrangvqgkq altlvfvetk
      421 kgadslehwl cmngfpatti hgdrsqqere qalrsfktga tpilvatdva argldiphva
      481 hvvnfdlpnd iddyvhrigr tgragktgla taffnenntn makaladlmq eanqevpawl
      541 tryaarsfga rnrrpggggr fggrdfrrds synrggsdyy sggnnnsggy gggyganvas
      601 awd
//
LOCUS       XP_040941755             438 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g55270 [Gossypium hirsutum].
ACCESSION   XP_040941755
VERSION     XP_040941755.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085821.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..438
                     /product="F-box/kelch-repeat protein At1g55270"
                     /calculated_mol_wt=49281
     Region          78..122
                     /region_name="F-box_AtAFR-like"
                     /note="F-box domain found in Arabidopsis thaliana protein
                     ATTENUATED FAR-RED RESPONSE (AtAFR) and similar proteins;
                     cd22152"
                     /db_xref="CDD:438923"
     Site            order(82,86,89..90,93..94,97,99..100,105..107,109)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438923"
     Region          155..>346
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          170..213
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          217..263
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          266..305
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..438
                     /gene="LOC121203517"
                     /coded_by="XM_041085821.1:257..1573"
                     /db_xref="GeneID:121203517"
ORIGIN      
        1 meqsvshqss nalrgfrvqa plvdsvscyc kvdsglktvv earkfvpgsk lciqpdinpn
       61 vhkskssrke rsrvqhpllp glpddlaiac lirvpraehr klrlvckrwy hllagnfffs
      121 lrkslgmaee wvyvlkrdrd gkiswnafdp ihqlwqplpp vpreysealg fgcavlsgch
      181 lylfggkdpl rgsmrrvvfy nartnkwhra pgmlrkrhff gscvinnrly vaggecdgih
      241 rtlrsaevyd pnknrwsfvq dmstamvpfi gvvydgkwfv kglgshrevm seaydpesns
      301 wsavsggmvs gwrnpcicln gklyaldcrd gcklrvydga tdswnkfids klhfgssral
      361 eaaglvplng klciirnnms vslvdvsspd kqvesnpqlw eniasrghfr tlftniwssi
      421 agrsslrshi ihcqvlqa
//
LOCUS       XP_040941756             438 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g55270 [Gossypium hirsutum].
ACCESSION   XP_040941756
VERSION     XP_040941756.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085822.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..438
                     /product="F-box/kelch-repeat protein At1g55270"
                     /calculated_mol_wt=49293
     Region          78..122
                     /region_name="F-box_AtAFR-like"
                     /note="F-box domain found in Arabidopsis thaliana protein
                     ATTENUATED FAR-RED RESPONSE (AtAFR) and similar proteins;
                     cd22152"
                     /db_xref="CDD:438923"
     Site            order(82,86,89..90,93..94,97,99..100,105..107,109)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438923"
     Region          155..>346
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          170..213
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          217..263
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          266..305
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..438
                     /gene="LOC121212643"
                     /coded_by="XM_041085822.1:701..2017"
                     /db_xref="GeneID:121212643"
ORIGIN      
        1 mdqsisqqss nalrgfrvqa plvdsvscyc kvdsglktva earkfvpgsk lciqpdinpn
       61 ahksknsrre rtrvqppllp glpddlaiac lirvpraehr klrvvckrwy rllagnffys
      121 lrkslgmaee wvyvfkrdrd gkiswnafdp ihqlwqplpp vpreyseavg fgcavlsgch
      181 lylfggkdrq rgsmrrvify sartnkwhra pdmlrkrhff gscvinncly vaggecegih
      241 rtlrsaevyd pnknrwsfvq dmstamvpfi gvvydgkwfv kglgshrevm seaydpesns
      301 wspasggmis gwrnpsisln gqlyaldcrd gcklrvydga tdswnkfids klhlgnsrvl
      361 eaaglvplng klciirnnms islvdvsspd kqvesnpqlw eniggrghfr tlftniwssi
      421 agrsglrshi vhcqvlqa
//
LOCUS       XP_040941757             438 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g55270 [Gossypium hirsutum].
ACCESSION   XP_040941757
VERSION     XP_040941757.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085823.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..438
                     /product="F-box/kelch-repeat protein At1g55270"
                     /calculated_mol_wt=49293
     Region          78..122
                     /region_name="F-box_AtAFR-like"
                     /note="F-box domain found in Arabidopsis thaliana protein
                     ATTENUATED FAR-RED RESPONSE (AtAFR) and similar proteins;
                     cd22152"
                     /db_xref="CDD:438923"
     Site            order(82,86,89..90,93..94,97,99..100,105..107,109)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438923"
     Region          155..>346
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          170..213
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          217..263
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          266..305
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..438
                     /gene="LOC121212643"
                     /coded_by="XM_041085823.1:223..1539"
                     /db_xref="GeneID:121212643"
ORIGIN      
        1 mdqsisqqss nalrgfrvqa plvdsvscyc kvdsglktva earkfvpgsk lciqpdinpn
       61 ahksknsrre rtrvqppllp glpddlaiac lirvpraehr klrvvckrwy rllagnffys
      121 lrkslgmaee wvyvfkrdrd gkiswnafdp ihqlwqplpp vpreyseavg fgcavlsgch
      181 lylfggkdrq rgsmrrvify sartnkwhra pdmlrkrhff gscvinncly vaggecegih
      241 rtlrsaevyd pnknrwsfvq dmstamvpfi gvvydgkwfv kglgshrevm seaydpesns
      301 wspasggmis gwrnpsisln gqlyaldcrd gcklrvydga tdswnkfids klhlgnsrvl
      361 eaaglvplng klciirnnms islvdvsspd kqvesnpqlw eniggrghfr tlftniwssi
      421 agrsglrshi vhcqvlqa
//
LOCUS       XP_040941758             368 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941758
VERSION     XP_040941758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085824.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..368
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39729
     CDS             1..368
                     /gene="LOC121212645"
                     /coded_by="XM_041085824.1:82..1188"
                     /db_xref="GeneID:121212645"
ORIGIN      
        1 mkdrgkavev yngsssssdf vckkhpqlss ngicayclkd rlvklvcsdc geqrlsscsc
       61 seissnprts ctgevgsvgr vsflienesk dqllkgking ggedkgedgn fflkrsnssc
      121 veikrknglw rlgrlfrkkr ekynggnvks vdynngvsrs rslcsfrggn gggffgsddg
      181 smnfsaarss sisaarsssv nggllgmdpd rksgfsepep rksgfdsdkr dsafvesdva
      241 tdikalrkag gvfldnetgf stanrrvfsl ketyftggdd safidlkfef psydtlvepg
      301 gsksvqkgfa sdgvsmfggg gscrvsvder gikrsrksfk gwkwifknnn pdwsgnrkkg
      361 ggdlmvnh
//
LOCUS       XP_016734987             330 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016734987
VERSION     XP_016734987.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734987.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..330
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36316
     CDS             1..330
                     /gene="LOC107945474"
                     /coded_by="XM_016879498.2:54..1046"
                     /db_xref="GeneID:107945474"
ORIGIN      
        1 mtigsvvgcr lfcpslqnis ttlkakghsk pnalplatlt hniipislwv cfpfpnpiff
       61 fllihsrsra atkfhqknhl fqkspkipnr emllslvqss flspstplck fhsnlnplkp
      121 sfllpkslsh kkslylspky atairasmie apvlwagrlc iyyallksgl agsqanplvs
      181 gleengdsvg esgdlgfskw ldnirgkpdk eaadkrklvs kwhpttkgtl krnyrvpsks
      241 egrrllkava sllsdddhft datshkgcqi rresahgesv ccnnvralfd elptphltve
      301 itpfpagplt eidyikaekl etvlrsgpsv
//
LOCUS       XP_016734963             190 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 22 [Gossypium hirsutum].
ACCESSION   XP_016734963
VERSION     XP_016734963.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879474.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734963.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..190
                     /product="dirigent protein 22"
                     /calculated_mol_wt=20814
     Region          47..188
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..190
                     /gene="LOC107945454"
                     /coded_by="XM_016879474.2:164..736"
                     /db_xref="GeneID:107945454"
ORIGIN      
        1 maklskntla ahfiftifiv salaengssf arsmdkkvlg mkkeklshfr lywhdivggk
       61 natavpvvfp srnsttafgm isviddpltm gpelsskmvg raqgfysaas qqeigllmam
      121 nfafmegkyn gstitilgrn tvfskvremp viggsglfrf argyvearth rfdpatgdav
      181 vqydcyvmhy
//
LOCUS       XP_040941759             406 aa            linear   PLN 06-AUG-2024
DEFINITION  metal tolerance protein 4 [Gossypium hirsutum].
ACCESSION   XP_040941759
VERSION     XP_040941759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085825.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="metal tolerance protein 4"
                     /calculated_mol_wt=45581
     Region          110..386
                     /region_name="FieF"
                     /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump
                     [Inorganic ion transport and metabolism]; COG0053"
                     /db_xref="CDD:439823"
     CDS             1..406
                     /gene="LOC121212646"
                     /coded_by="XM_041085825.1:256..1476"
                     /db_xref="GeneID:121212646"
ORIGIN      
        1 mesgdsnsgv ktalltsgen gkrvrfvrrn svnslrndfm lrlpdkvrtg ldaespfdid
       61 vsktkgltqg ekeyyktqfe tlksfeevda ighaetsdde yedeeriqhe ramkisnyan
      121 ivllafklya tiksgsiaia astldslldl maggilwfth ssmkntniyk ypigklriqp
      181 vgivifaavm atlgfqvfvq aveqliadep tekmsadklm wlytimlsat fvklalwiyc
      241 ksstnkivra yakdhyfdvv tnvvgllaav lgdkfywwld pagaialaiy titnwsgtvm
      301 enavslvgqs appeflqklt ylvirhpqvk rvdtvraytf gvlyfvevdi elpedlplke
      361 ahtigetlqi kieklpever afvhldfece hkpehsvlsr lpnskd
//
LOCUS       XP_040941760             406 aa            linear   PLN 06-AUG-2024
DEFINITION  metal tolerance protein 4 [Gossypium hirsutum].
ACCESSION   XP_040941760
VERSION     XP_040941760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085826.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="metal tolerance protein 4"
                     /calculated_mol_wt=45581
     Region          110..386
                     /region_name="FieF"
                     /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump
                     [Inorganic ion transport and metabolism]; COG0053"
                     /db_xref="CDD:439823"
     CDS             1..406
                     /gene="LOC121212646"
                     /coded_by="XM_041085826.1:211..1431"
                     /db_xref="GeneID:121212646"
ORIGIN      
        1 mesgdsnsgv ktalltsgen gkrvrfvrrn svnslrndfm lrlpdkvrtg ldaespfdid
       61 vsktkgltqg ekeyyktqfe tlksfeevda ighaetsdde yedeeriqhe ramkisnyan
      121 ivllafklya tiksgsiaia astldslldl maggilwfth ssmkntniyk ypigklriqp
      181 vgivifaavm atlgfqvfvq aveqliadep tekmsadklm wlytimlsat fvklalwiyc
      241 ksstnkivra yakdhyfdvv tnvvgllaav lgdkfywwld pagaialaiy titnwsgtvm
      301 enavslvgqs appeflqklt ylvirhpqvk rvdtvraytf gvlyfvevdi elpedlplke
      361 ahtigetlqi kieklpever afvhldfece hkpehsvlsr lpnskd
//
LOCUS       XP_040941761             406 aa            linear   PLN 06-AUG-2024
DEFINITION  metal tolerance protein 4 [Gossypium hirsutum].
ACCESSION   XP_040941761
VERSION     XP_040941761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085827.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="metal tolerance protein 4"
                     /calculated_mol_wt=45581
     Region          110..386
                     /region_name="FieF"
                     /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump
                     [Inorganic ion transport and metabolism]; COG0053"
                     /db_xref="CDD:439823"
     CDS             1..406
                     /gene="LOC121212646"
                     /coded_by="XM_041085827.1:129..1349"
                     /db_xref="GeneID:121212646"
ORIGIN      
        1 mesgdsnsgv ktalltsgen gkrvrfvrrn svnslrndfm lrlpdkvrtg ldaespfdid
       61 vsktkgltqg ekeyyktqfe tlksfeevda ighaetsdde yedeeriqhe ramkisnyan
      121 ivllafklya tiksgsiaia astldslldl maggilwfth ssmkntniyk ypigklriqp
      181 vgivifaavm atlgfqvfvq aveqliadep tekmsadklm wlytimlsat fvklalwiyc
      241 ksstnkivra yakdhyfdvv tnvvgllaav lgdkfywwld pagaialaiy titnwsgtvm
      301 enavslvgqs appeflqklt ylvirhpqvk rvdtvraytf gvlyfvevdi elpedlplke
      361 ahtigetlqi kieklpever afvhldfece hkpehsvlsr lpnskd
//
LOCUS       XP_040941762             120 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941762
VERSION     XP_040941762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085828.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..120
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14042
     CDS             1..120
                     /gene="LOC121212647"
                     /coded_by="XM_041085828.1:97..459"
                     /db_xref="GeneID:121212647"
ORIGIN      
        1 maryyrdsym dylslpplhl cffisilffv lgfswylnye svledfmnql kfflmlapiv
       61 lllllhcfsg rvpslipepe kdslhraggs pwgvalvlvl llymisyqsy fherwfpfgv
//
LOCUS       XP_040941763             287 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase TCM_000331 [Gossypium hirsutum].
ACCESSION   XP_040941763
VERSION     XP_040941763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085829.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..287
                     /product="probable methyltransferase TCM_000331"
                     /calculated_mol_wt=32196
     Region          1..280
                     /region_name="Methyltransf_7"
                     /note="SAM dependent carboxyl methyltransferase;
                     pfam03492"
                     /db_xref="CDD:460946"
     CDS             1..287
                     /gene="LOC121203523"
                     /coded_by="XM_041085829.1:46..909"
                     /db_xref="GeneID:121203523"
ORIGIN      
        1 mlskmvpvpc ikvadlgcat gpntffptce ivdivtricq eahcespelq vflndlpqnd
       61 fntvfksvps fngrpcfiag vagsfyqrif ptnsihfvhs syslhwlskv pgevenkrnv
      121 yiaksnppnv skayfeqfrn dfssflrfrs eemitggrml ltfvgrsitd ptskdccaiw
      181 glftkslldl maeglvcesd vdsfnvpyyh pckeevrkii etegsfalne letfkmnwdf
      241 eddicnenfv fensksgrnv anciraiaes livshfgdti kicstcg
//
LOCUS       XP_040941764             233 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941764
VERSION     XP_040941764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085830.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..233
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25880
     Region          100..219
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     Site            order(102..105,136..137,140,167,206)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..233
                     /gene="LOC107945428"
                     /coded_by="XM_041085830.1:258..959"
                     /db_xref="GeneID:107945428"
ORIGIN      
        1 mlcfkakiig sckslwltsi aascwsiwla rneivfdnkv ltmdtlifhs kmrallwvra
       61 ateecrfqer lwwlcpyrce lsnsgsagwr spplgglkfn vsgaaleges gvggvmrdee
      121 givralfsgp svacdtesae leaitiamdv fndigwkdsc sliiemgsrk vfnwilekss
      181 rpwsqysvfa kidrrracag kltfsfaeeg gnemadalas tgmsrpclfk aww
//
LOCUS       XP_040941765             385 aa            linear   PLN 06-AUG-2024
DEFINITION  delta(12)-acyl-lipid-desaturase [Gossypium hirsutum].
ACCESSION   XP_040941765
VERSION     XP_040941765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085831.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..385
                     /product="delta(12)-acyl-lipid-desaturase"
                     /calculated_mol_wt=43931
     Region          1..385
                     /region_name="PLN02505"
                     /note="omega-6 fatty acid desaturase"
                     /db_xref="CDD:178121"
     Site            order(104,108,140,143..144,314,317..318)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239584"
     CDS             1..385
                     /gene="LOC121212649"
                     /coded_by="XM_041085831.1:168..1325"
                     /db_xref="GeneID:121212649"
ORIGIN      
        1 mgaggrmlvd gkkeekrgsv nrvpiekppf tlgqikqaip phcfrrsllr sfsyvvhdlc
       61 laslfyyiat syfhflpqpf syiawpvywv lqgciltgvw viahecghha fsdyqwvddt
      121 vglilhsall vpyfswkish rrhhsntgsm erdevfvpkp ksklscfaky lnnppgrvls
      181 lvvtltlgwp mylafnvsgr yydrlashyn pygpiysdre rlqvyisdtg ifaviyvlyk
      241 iaatkglawl lctygvplli vnaflvlity lqhthsalph ydssewdwlr galstmdrdf
      301 gvlnkvfhni tdthvahhlf stmphyhame atkaikpilg kyypfdgtpi ykamwreake
      361 clyvepdvgg ggggskgvfw yrnkf
//
LOCUS       XP_040941766             228 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 11 [Gossypium
            hirsutum].
ACCESSION   XP_040941766
VERSION     XP_040941766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085832.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..228
                     /product="transcription initiation factor TFIID subunit
                     11"
                     /calculated_mol_wt=25573
     Region          130..216
                     /region_name="HFD_TAF11"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 11 (TAF11) and similar
                     proteins; cd08048"
                     /db_xref="CDD:467028"
     Site            order(130,132,135..136,138..140,142..143,148,166,170,179,
                     190,193..194,201..203,206..207,209..211,213..215)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     Site            order(133,136..137,140..141,144..147,150..151,154..155,
                     158..159,175..177,179..181,184,188,199..202,205..206,209)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     CDS             1..228
                     /gene="LOC121212650"
                     /coded_by="XM_041085832.1:115..801"
                     /db_xref="GeneID:121212650"
ORIGIN      
        1 mkqskdpfea aleeqeespp dspvgedeln sqtpnepqnq tngghnllvd dddydnigpn
       61 iknpshpsss stpklhstsv nanvatratt knkeyedeee eenvevelsk fpssadpakm
      121 akmqailsqf tenqmsryes frrsalqrsn mrrllvsitg sqkislpmti vvcgiakmfv
      181 gelvekariv mterkesgpi rpchireayr rlklegkvpk rsvqrlfr
//
LOCUS       XP_040941767             228 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 11 [Gossypium
            hirsutum].
ACCESSION   XP_040941767
VERSION     XP_040941767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085833.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..228
                     /product="transcription initiation factor TFIID subunit
                     11"
                     /calculated_mol_wt=25573
     Region          130..216
                     /region_name="HFD_TAF11"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 11 (TAF11) and similar
                     proteins; cd08048"
                     /db_xref="CDD:467028"
     Site            order(130,132,135..136,138..140,142..143,148,166,170,179,
                     190,193..194,201..203,206..207,209..211,213..215)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     Site            order(133,136..137,140..141,144..147,150..151,154..155,
                     158..159,175..177,179..181,184,188,199..202,205..206,209)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     CDS             1..228
                     /gene="LOC121212650"
                     /coded_by="XM_041085833.1:115..801"
                     /db_xref="GeneID:121212650"
ORIGIN      
        1 mkqskdpfea aleeqeespp dspvgedeln sqtpnepqnq tngghnllvd dddydnigpn
       61 iknpshpsss stpklhstsv nanvatratt knkeyedeee eenvevelsk fpssadpakm
      121 akmqailsqf tenqmsryes frrsalqrsn mrrllvsitg sqkislpmti vvcgiakmfv
      181 gelvekariv mterkesgpi rpchireayr rlklegkvpk rsvqrlfr
//
LOCUS       XP_040941768             228 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 11 [Gossypium
            hirsutum].
ACCESSION   XP_040941768
VERSION     XP_040941768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085834.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..228
                     /product="transcription initiation factor TFIID subunit
                     11"
                     /calculated_mol_wt=25573
     Region          130..216
                     /region_name="HFD_TAF11"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 11 (TAF11) and similar
                     proteins; cd08048"
                     /db_xref="CDD:467028"
     Site            order(130,132,135..136,138..140,142..143,148,166,170,179,
                     190,193..194,201..203,206..207,209..211,213..215)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     Site            order(133,136..137,140..141,144..147,150..151,154..155,
                     158..159,175..177,179..181,184,188,199..202,205..206,209)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     CDS             1..228
                     /gene="LOC121212650"
                     /coded_by="XM_041085834.1:115..801"
                     /db_xref="GeneID:121212650"
ORIGIN      
        1 mkqskdpfea aleeqeespp dspvgedeln sqtpnepqnq tngghnllvd dddydnigpn
       61 iknpshpsss stpklhstsv nanvatratt knkeyedeee eenvevelsk fpssadpakm
      121 akmqailsqf tenqmsryes frrsalqrsn mrrllvsitg sqkislpmti vvcgiakmfv
      181 gelvekariv mterkesgpi rpchireayr rlklegkvpk rsvqrlfr
//
LOCUS       XP_040941769             616 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 7.1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941769
VERSION     XP_040941769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085835.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..616
                     /product="protein NRT1/ PTR FAMILY 7.1 isoform X1"
                     /calculated_mol_wt=67321
     Region          62..588
                     /region_name="MFS_NPF7"
                     /note="NRT1/PTR family (NPF), subfamily 7 of the Major
                     Facilitator Superfamily of transporters; cd17419"
                     /db_xref="CDD:340977"
     Site            order(75..76,79..80,83,116,190..191,193..195,198,224,
                     227..228,231,373,376..377,380..382,385,416,420,496..497,
                     501,505,521,524..525,528..529,532)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340977"
     CDS             1..616
                     /gene="LOC107945399"
                     /coded_by="XM_041085835.1:290..2140"
                     /db_xref="GeneID:107945399"
ORIGIN      
        1 madiesstde ierkkklsmd aiehstdeie kkadeeiisf gkiesgnenq hspgkrkkcg
       61 gwelaslllv nqglatlaff gvgvnlvlfl trvldqdsav aannvskwtg tvylcsliga
      121 flsdsywgry ftcaifqlil vlglgllsfa swfflisptg cgdgmklcnt pssvgvvmfy
      181 lsiylialgy gghqptvatl gadqfddsnp naviskaaff ssfyfalnvg slfsntilvy
      241 yedsgkwtlg flvsfgaaii alllylsgts ryryvkasgn plprvaqvfv aayrkwgvtp
      301 atvdalyeve gtesaikgsr kilhsndfkf ldkaatitsm dlrgpnnpwk lctvtqveea
      361 kcvlkmlpiw lctiiysvif tqmaslfveq gdvmasklkn fripaasmsa fdicsvliwt
      421 gvyrhvvvpv srsltgnpkg ltemqrmgtg liigmiamva agvteiqrlk svspgskkss
      481 lsifwqvpqy vlvgasevfm yvgqleffng qapdgiksfg sslcmasmsl gnyvssllin
      541 ivmevttrdg gpgwipddln dgrmdrfyfl iagltavdfi iyvycakwyn ginldtsenv
      601 iqseeqrkev laslms
//
LOCUS       XP_016734882             598 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 7.1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016734882
VERSION     XP_016734882.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734882.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..598
                     /product="protein NRT1/ PTR FAMILY 7.1 isoform X2"
                     /calculated_mol_wt=65259
     Region          44..570
                     /region_name="MFS_NPF7"
                     /note="NRT1/PTR family (NPF), subfamily 7 of the Major
                     Facilitator Superfamily of transporters; cd17419"
                     /db_xref="CDD:340977"
     Site            order(57..58,61..62,65,98,172..173,175..177,180,206,
                     209..210,213,355,358..359,362..364,367,398,402,478..479,
                     483,487,503,506..507,510..511,514)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340977"
     CDS             1..598
                     /gene="LOC107945399"
                     /coded_by="XM_016879393.2:89..1885"
                     /db_xref="GeneID:107945399"
ORIGIN      
        1 mdaiehstde iekkadeeii sfgkiesgne nqhspgkrkk cggwelasll lvnqglatla
       61 ffgvgvnlvl fltrvldqds avaannvskw tgtvylcsli gaflsdsywg ryftcaifql
      121 ilvlglglls faswfflisp tgcgdgmklc ntpssvgvvm fylsiylial gygghqptva
      181 tlgadqfdds npnaviskaa ffssfyfaln vgslfsntil vyyedsgkwt lgflvsfgaa
      241 iialllylsg tsryryvkas gnplprvaqv fvaayrkwgv tpatvdalye vegtesaikg
      301 srkilhsndf kfldkaatit smdlrgpnnp wklctvtqve eakcvlkmlp iwlctiiysv
      361 iftqmaslfv eqgdvmaskl knfripaasm safdicsvli wtgvyrhvvv pvsrsltgnp
      421 kgltemqrmg tgliigmiam vaagvteiqr lksvspgskk sslsifwqvp qyvlvgasev
      481 fmyvgqleff ngqapdgiks fgsslcmasm slgnyvssll inivmevttr dggpgwipdd
      541 lndgrmdrfy fliagltavd fiiyvycakw ynginldtse nviqseeqrk evlaslms
//
LOCUS       XP_040941770             392 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040941770
VERSION     XP_040941770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085836.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..392
                     /product="enoyl-[acyl-carrier-protein] reductase [NADH],
                     chloroplastic"
                     /calculated_mol_wt=41651
     Region          85..387
                     /region_name="PLN02730"
                     /note="enoyl-[acyl-carrier-protein] reductase"
                     /db_xref="CDD:178331"
     Site            order(100..102,106..107,127,163..165,211..214,236,
                     261..263,273,281,308..311,313..316)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187630"
     Site            order(117,165..168,191,221..227,230..231,234..235,
                     238..239,242,246,249,265..266,268..271,273..274,278..279,
                     282..283,286..287,289..294,296..297,325,328,334..337,343,
                     346..347,350,355,357..369,371..374)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:187630"
     Site            order(165..168,221..227,230..231,234..235,238..239,242,
                     245..246,249,265..266,268..270,273..274,278..279,282..283,
                     286..287,289..291,293..295)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187630"
     Site            order(213,215,263,273,277,281,315..316,319,322)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187630"
     Site            order(237,263,277,281)
                     /site_type="active"
                     /db_xref="CDD:187630"
     CDS             1..392
                     /gene="LOC121212651"
                     /coded_by="XM_041085836.1:139..1317"
                     /db_xref="GeneID:121212651"
ORIGIN      
        1 maatvasslq lmaarhflsf spgvvkagaa ilcsnpktvl wpkltspcni sslnpfrhgf
       61 rsstvkfikv vtkamsesne nkpvsglpid lkgkrafiag vaddngygwa iakslaaaga
      121 eilvgtwvpa lnifetslrr gkfdesrllp dgslmeitkv ypldaifdnl ddvpediktn
      181 kryagsskwt vqevaesvkq dfrsidilvh slangpevsk plldtsrkgy laalsassys
      241 hvsllkhflp lmnpggssis ltyiaserii pgygggmssa kaalesdtrv lafeagrkhk
      301 irvnaisagp lrsraakaig fidmmieysk anaplqkels adevgntaaf lasplasait
      361 gaviyvdngl namgigvdsp ifkdlnipsd kh
//
LOCUS       XP_040941771             392 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040941771
VERSION     XP_040941771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085837.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..392
                     /product="enoyl-[acyl-carrier-protein] reductase [NADH],
                     chloroplastic"
                     /calculated_mol_wt=41651
     Region          85..387
                     /region_name="PLN02730"
                     /note="enoyl-[acyl-carrier-protein] reductase"
                     /db_xref="CDD:178331"
     Site            order(100..102,106..107,127,163..165,211..214,236,
                     261..263,273,281,308..311,313..316)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187630"
     Site            order(117,165..168,191,221..227,230..231,234..235,
                     238..239,242,246,249,265..266,268..271,273..274,278..279,
                     282..283,286..287,289..294,296..297,325,328,334..337,343,
                     346..347,350,355,357..369,371..374)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:187630"
     Site            order(165..168,221..227,230..231,234..235,238..239,242,
                     245..246,249,265..266,268..270,273..274,278..279,282..283,
                     286..287,289..291,293..295)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187630"
     Site            order(213,215,263,273,277,281,315..316,319,322)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187630"
     Site            order(237,263,277,281)
                     /site_type="active"
                     /db_xref="CDD:187630"
     CDS             1..392
                     /gene="LOC121212651"
                     /coded_by="XM_041085837.1:507..1685"
                     /db_xref="GeneID:121212651"
ORIGIN      
        1 maatvasslq lmaarhflsf spgvvkagaa ilcsnpktvl wpkltspcni sslnpfrhgf
       61 rsstvkfikv vtkamsesne nkpvsglpid lkgkrafiag vaddngygwa iakslaaaga
      121 eilvgtwvpa lnifetslrr gkfdesrllp dgslmeitkv ypldaifdnl ddvpediktn
      181 kryagsskwt vqevaesvkq dfrsidilvh slangpevsk plldtsrkgy laalsassys
      241 hvsllkhflp lmnpggssis ltyiaserii pgygggmssa kaalesdtrv lafeagrkhk
      301 irvnaisagp lrsraakaig fidmmieysk anaplqkels adevgntaaf lasplasait
      361 gaviyvdngl namgigvdsp ifkdlnipsd kh
//
LOCUS       XP_040941772             420 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EMSY-LIKE 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941772
VERSION     XP_040941772.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085838.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..420
                     /product="protein EMSY-LIKE 3 isoform X1"
                     /calculated_mol_wt=45583
     Region          60..130
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          242..292
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(250,255,257,275,277,279)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     CDS             1..420
                     /gene="LOC121212652"
                     /coded_by="XM_041085838.1:594..1856"
                     /db_xref="GeneID:121212652"
ORIGIN      
        1 mdyelsdssg tdddlpsshq nrfqrggrta agngrstvvg smgngrsava plprihgdme
       61 tqihlieqea yssvlrafka qsdaltweke slitelrkel rvsdeehrel lsrvnaddmi
      121 lrirewraag gmqpgmlsts qpihdpvpsp svsgsrkkqk tsqsvaslsm vapspalhps
      181 mqpsssalrr gppsgakskk sksstqytst glpgrpqasn rmssgafatn epaeaapydp
      241 ligrkvwtrw pednhfyeav itdynrlegr halvydinta detwewvnlk eispedirwe
      301 gddpaisrrg grpgpgpgik ksmahgggvv gagrgrgnlk gqgkkdfplt qngvgkkvlg
      361 dieilhtdtl ikevekvfsa nhpdpveiek akkvlneheq alvdaiarle dasdgesgnh
//
LOCUS       XP_040941773             418 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EMSY-LIKE 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941773
VERSION     XP_040941773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085839.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..418
                     /product="protein EMSY-LIKE 3 isoform X2"
                     /calculated_mol_wt=45346
     Region          60..130
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          242..292
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(250,255,257,275,277,279)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     CDS             1..418
                     /gene="LOC121212652"
                     /coded_by="XM_041085839.1:607..1863"
                     /db_xref="GeneID:121212652"
ORIGIN      
        1 mdyelsdssg tdddlpsshq nrfqrggrta agngrstvvg smgngrsava plprihgdme
       61 tqihlieqea yssvlrafka qsdaltweke slitelrkel rvsdeehrel lsrvnaddmi
      121 lrirewraag gmqpgmlsts qpihdpvpsp svsgsrkkqk tsqsvaslsm vapspalhps
      181 mqpsssalrr gppsgakskk sksstqytst glpgrpqasn rmssgafatn epaeaapydp
      241 ligrkvwtrw pednhfyeav itdynrlegr halvydinta detwewvnlk eispedirwe
      301 gddpaisrrg grpgpgpgik ksmahgggvv gagrgrgnlk gqgkkdfplt qngvgkkvlg
      361 dieilhtdtl ikevekvfsa nhpdpveiek akkvlneheq alvdaiarle dasdgesa
//
LOCUS       XP_016741164             221 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein RP471 [Gossypium hirsutum].
ACCESSION   XP_016741164
VERSION     XP_016741164.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885675.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741164.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..221
                     /product="uncharacterized protein RP471"
                     /calculated_mol_wt=23484
     Region          5..220
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
     CDS             1..221
                     /gene="LOC107950722"
                     /coded_by="XM_016885675.2:188..853"
                     /db_xref="GeneID:107950722"
ORIGIN      
        1 mpnytlesst vetldgvnlm trifkpkqvk dnmvivlvhq ysimggcqal mkgmasglad
       61 kgyaavtfdm rgvgqstgkp sltgfaevad vvavcnwvsq nlspnkillv gssagapiag
      121 savdqiehii gyvslgypfg mmasilfgrh hkailqspkp klfvmgtedg ftsvkqldnk
      181 lksaaghnet rliegaghfe megpafdaem vkcilefias l
//
LOCUS       XP_040941774             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941774
VERSION     XP_040941774.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085840.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=35873
     CDS             1..314
                     /gene="LOC121203150"
                     /coded_by="XM_041085840.1:3402..4346"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rklrktksrs
      301 grprkllswf aftl
//
LOCUS       XP_040941775             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941775
VERSION     XP_040941775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085841.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=35873
     CDS             1..314
                     /gene="LOC121203150"
                     /coded_by="XM_041085841.1:3224..4168"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rklrktksrs
      301 grprkllswf aftl
//
LOCUS       XP_040941776             307 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941776
VERSION     XP_040941776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085842.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..307
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=35011
     CDS             1..307
                     /gene="LOC121203150"
                     /coded_by="XM_041085842.1:3402..4325"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rmqrrssrpr
      301 nasnlsr
//
LOCUS       XP_040941777             307 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941777
VERSION     XP_040941777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085843.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..307
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=35011
     CDS             1..307
                     /gene="LOC121203150"
                     /coded_by="XM_041085843.1:3402..4325"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rmqrrssrpr
      301 nasnlsr
//
LOCUS       XP_040941778             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941778
VERSION     XP_040941778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085844.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=34752
     CDS             1..305
                     /gene="LOC121203150"
                     /coded_by="XM_041085844.1:3402..4319"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rrrssrprna
      301 snlsr
//
LOCUS       XP_040941779             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941779
VERSION     XP_040941779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085845.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=34752
     CDS             1..305
                     /gene="LOC121203150"
                     /coded_by="XM_041085845.1:3402..4319"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rrrssrprna
      301 snlsr
//
LOCUS       XP_040941780             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941780
VERSION     XP_040941780.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085846.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=34752
     CDS             1..305
                     /gene="LOC121203150"
                     /coded_by="XM_041085846.1:3402..4319"
                     /db_xref="GeneID:121203150"
ORIGIN      
        1 mrirnsrppf plpsvsdpts rfthrlpsgn glyfddrflv qetnrqigws fyhlkhaarq
       61 vseegpcgel nkvltmetrp incqdkekrk sycmqekssq amggpheara nradegsepy
      121 lfikdnkdgn tssgavnfdi aqpftsyelg gevsdkkkkq iclletemar grkedailek
      181 kmelgnvsek siedeygskr trtlfcptnc eyfflpeneg fegygmqsgm sfedivvetk
      241 ekprrvkkrk egdqsgdakw yterfigkqa snegksskrg kptadaqwek rrrssrprna
      301 snlsr
//
LOCUS       XP_016734841             251 aa            linear   PLN 06-AUG-2024
DEFINITION  octanoyltransferase LIP2, mitochondrial isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016734841
VERSION     XP_016734841.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879352.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734841.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..251
                     /product="octanoyltransferase LIP2, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=28267
     Region          24..230
                     /region_name="LipB"
                     /note="lipoyl/octanoyl transferase; cd16444"
                     /db_xref="CDD:319743"
     Site            order(95,97..100,102,110,160,163..165,176..178)
                     /site_type="active"
                     /db_xref="CDD:319743"
     CDS             1..251
                     /gene="LOC107945377"
                     /coded_by="XM_016879352.2:246..1001"
                     /db_xref="GeneID:107945377"
ORIGIN      
        1 miseswlpfc isnwwemrgp gklevwkmgf vnyldalklq eklvsdrklc ripdtllslq
       61 hpptytlgkr rtdhnlllpv selknigael hytqrggdit fhgphqaily piislreigi
      121 garnyvekle stmielssly gvkacasqkg etgvwvgerk igaigvrisy gitshglayn
      181 idpdlkyfkh ivpcgitdke vtslrretat vlpaeeviqe qliscfarlf gystvtwken
      241 psmfsdhesi d
//
LOCUS       XP_016734849             235 aa            linear   PLN 06-AUG-2024
DEFINITION  octanoyltransferase LIP2, mitochondrial isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016734849
VERSION     XP_016734849.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734849.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..235
                     /product="octanoyltransferase LIP2, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=26256
     Region          8..214
                     /region_name="LipB"
                     /note="lipoyl/octanoyl transferase; cd16444"
                     /db_xref="CDD:319743"
     Site            order(79,81..84,86,94,144,147..149,160..162)
                     /site_type="active"
                     /db_xref="CDD:319743"
     CDS             1..235
                     /gene="LOC107945377"
                     /coded_by="XM_016879360.2:279..986"
                     /db_xref="GeneID:107945377"
ORIGIN      
        1 mrgpgklevw kmgfvnylda lklqeklvsd rklcripdtl lslqhpptyt lgkrrtdhnl
       61 llpvselkni gaelhytqrg gditfhgphq ailypiislr eigigarnyv eklestmiel
      121 sslygvkaca sqkgetgvwv gerkigaigv risygitshg laynidpdlk yfkhivpcgi
      181 tdkevtslrr etatvlpaee viqeqliscf arlfgystvt wkenpsmfsd hesid
//
LOCUS       XP_040941781             438 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 4 [Gossypium hirsutum].
ACCESSION   XP_040941781
VERSION     XP_040941781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085847.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..438
                     /product="actin-related protein 4"
                     /calculated_mol_wt=48077
     Region          4..429
                     /region_name="ASKHA_NBD_Arp4_ACTL6-like"
                     /note="nucleotide-binding domain (NBD) of the
                     actin-related protein 4 (Arp4)-like subfamily; cd13395"
                     /db_xref="CDD:466846"
     CDS             1..438
                     /gene="LOC121203564"
                     /coded_by="XM_041085847.1:256..1572"
                     /db_xref="GeneID:121203564"
ORIGIN      
        1 myggdevsai vidlgshtck agyagedapk avfpsvvgci dqmdadddke nndsetnnnn
       61 vdsnkpkgkr rlyvgsqalg frrdhmevvs plkdgvvvdw divdsiwdha lkdcllvdpk
      121 ehpmllaeps sntqqqrert aelmfekykv palflaknav ltsfasgrat svvvdsgggs
      181 ttvapvhdgy vlqkavsssp iggefltdcl mksleskgiv ikprysfkrk eiqpgvfqtv
      241 dvdfphttes yklysqrvia sdikecvcra pdtpydesay snipmtpyel pdgqtieiga
      301 drfkipdilf npplaqtipg mdnfaeisss vrglpqmvie sinrcdvdir kelfgsilla
      361 ggtasmqqlk erlekdllee spqaarvkvl asgnaterrf svwiggsila slgsfqqmwf
      421 skseyeehga syiqrkcp
//
LOCUS       XP_016734815             669 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA topoisomerase 6 subunit B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016734815
VERSION     XP_016734815.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879326.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734815.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..669
                     /product="DNA topoisomerase 6 subunit B isoform X1"
                     /calculated_mol_wt=75817
     Region          26..622
                     /region_name="COG1389"
                     /note="DNA topoisomerase VI, subunit B [Replication,
                     recombination and repair]"
                     /db_xref="CDD:440999"
     CDS             1..669
                     /gene="LOC107945355"
                     /coded_by="XM_016879326.2:215..2224"
                     /db_xref="GeneID:107945355"
ORIGIN      
        1 mesecptetk kgksktpkka kesilkqksp aeffaenkni agfdnpgkcl yttvrelven
       61 aldsaeaise lpvieitiee ivkskfnsmi glvdrervde elyddyetak arekrlakea
      121 raqeiqakna algkkvkeha vsksskgrge asfyrvtcrd ngrgmphddi pnmfgrvlsg
      181 tkyglkqtrg kfglgakmal iwskmstglp ieisssmrgq nylsfcrldi dihrniphih
      241 lhekrdnkdk whgaeiqvvi egnwttyrsk ilhymrqmav itpyaqflfk fvsdapdknv
      301 tikfarrtdv mppvpvetkh hpssvdilli krliaetskq nlmqflqhef vnigkplaer
      361 ligemgpefs pktavksltd qqivrihqlf rqakfddpsg dclspageyn lrlgiikelh
      421 pdmvatysgs aqvfeghpfi veagvsvggk dvkqglnifr fanripllfe qggdvvtrta
      481 lkriswnnyk inqtqdkigv fvsivstkip fkgtgkeyig ddiseiasav ksaiqqcciq
      541 lkskivkkmq areqqerkrn lskyipdatn avydvlkema kshaskkkry eegdadilrk
      601 vsdhlitket lyekltqhve kvdyemaley atqtgvreep rediylesld dkgnffdfhs
      661 pifvfrlfl
//
LOCUS       XP_016734823             665 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA topoisomerase 6 subunit B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016734823
VERSION     XP_016734823.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879334.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734823.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..665
                     /product="DNA topoisomerase 6 subunit B isoform X2"
                     /calculated_mol_wt=75358
     Region          26..618
                     /region_name="COG1389"
                     /note="DNA topoisomerase VI, subunit B [Replication,
                     recombination and repair]"
                     /db_xref="CDD:440999"
     CDS             1..665
                     /gene="LOC107945355"
                     /coded_by="XM_016879334.2:152..2149"
                     /db_xref="GeneID:107945355"
ORIGIN      
        1 mesecptetk kgksktpkka kesilkqksp aeffaenkni agfdnpgkcl yttvrelven
       61 aldsaeaise lpvieitiee ivkskfnsmi glvdrervde elyddyetak arekrlakea
      121 raqeiqakna algkkvkeha vsksskgrge asfyrdngrg mphddipnmf grvlsgtkyg
      181 lkqtrgkfgl gakmaliwsk mstglpieis ssmrgqnyls fcrldidihr niphihlhek
      241 rdnkdkwhga eiqvviegnw ttyrskilhy mrqmavitpy aqflfkfvsd apdknvtikf
      301 arrtdvmppv pvetkhhpss vdillikrli aetskqnlmq flqhefvnig kplaerlige
      361 mgpefspkta vksltdqqiv rihqlfrqak fddpsgdcls pageynlrlg iikelhpdmv
      421 atysgsaqvf eghpfiveag vsvggkdvkq glnifrfanr ipllfeqggd vvtrtalkri
      481 swnnykinqt qdkigvfvsi vstkipfkgt gkeyigddis eiasavksai qqcciqlksk
      541 ivkkmqareq qerkrnlsky ipdatnavyd vlkemaksha skkkryeegd adilrkvsdh
      601 litketlyek ltqhvekvdy emaleyatqt gvreepredi yleslddkgn ffdfhspifv
      661 frlfl
//
LOCUS       XP_040941782             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941782
VERSION     XP_040941782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085848.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085848.1:292..2607"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_040941783             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941783
VERSION     XP_040941783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085849.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085849.1:321..2636"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_040941784             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941784
VERSION     XP_040941784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085850.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085850.1:297..2612"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_040941785             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941785
VERSION     XP_040941785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085851.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085851.1:324..2639"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_040941786             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941786
VERSION     XP_040941786.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085852.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085852.1:319..2634"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_040941787             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941787
VERSION     XP_040941787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085853.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085853.1:322..2637"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_040941788             771 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040941788
VERSION     XP_040941788.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085854.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..771
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88056
     Region          41..165
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(62,109,111,116)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          202..351
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(217,223,271,273,279)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          363..488
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(381,387,433,435,446)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     Region          616..771
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..771
                     /gene="LOC121202944"
                     /coded_by="XM_041085854.1:250..2565"
                     /db_xref="GeneID:121202944"
ORIGIN      
        1 mqkppqsidf alketspkig agavtgdkls stydlveqmq ylyvrvvkak dlpgkdvtgg
       61 cdpyvevklg nykgvtkhfe kknnpewnqv fafskeriqa svlevyvkdk dvvaddligr
      121 alfdlneipk rippdsplap qwyrledrkg dkakgelmla vwmgtqadea fpeawhsdaa
      181 svgpdavasi rskvylspkl wyvrvnviea qdlvpndksr fpevfvkaml gnqalrtris
      241 qsktinpmwn edlmfvvaep feeplvlsve drvggnkdet lgkcviplhi vqrrldhrpv
      301 nsrwlnlekh vivdgekkei kfasrihlri cleggyhvld esthyssdlr ptakqlwrps
      361 igilelgils ahglmpmktk dgrgttdayc vakygqkwir trtivdnfmp rwneqytwev
      421 fdtctvitvg vfdnghvhgg aggardarig kvrirlstle adrvythsyp llvlhpsgvk
      481 ktgeiqlalr ftcsslinml hmyshpllpk mhyihplsvi qldvlrhqam qivstrlsra
      541 epplrkevve ymldvdshmw smrrskanff rimgvlsgli avgkwfdqic nwrnplttil
      601 ihilfiilvl ypelilptif lylfligiwn yrwrprhpph mdtrlshada ahpdeldeef
      661 dtfptsrpsd ivrmrydrlr siagrvqtvi gdlatqgerf qsllswrdpr attlfvtfcl
      721 iaalvlyvtp fqvvallagi yvlrhprfrh klpstplnff rrlparsdsm l
//
LOCUS       XP_016734769             321 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 9 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016734769
VERSION     XP_016734769.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734769.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="CCR4-NOT transcription complex subunit 9 isoform
                     X1"
                     /calculated_mol_wt=35311
     Region          43..301
                     /region_name="Rcd1"
                     /note="Cell differentiation family, Rcd1-like; pfam04078"
                     /db_xref="CDD:461160"
     CDS             1..321
                     /gene="LOC107945315"
                     /coded_by="XM_016879280.2:190..1155"
                     /db_xref="GeneID:107945315"
ORIGIN      
        1 mqtgnlpqsl smnspfggps asnptvagap ankdrkmata ehlvldlsnp dlrenallel
       61 sknkelfqdl apfvwnsfgt iaaliqeivs iypvlsppnl tpaqsnrvcn alallqcvas
      121 hpdtrmlfln ahiplylypf lnttsksrpf eylrltslgv igalvkvddt evisfllste
      181 iiplclrtme mgselsktva tfivqkilld dvgldyictt aerffavgrv lgnmvaalae
      241 qpssrllkhi ircylrlsdn pracdalrsc lpdmlrdvtf ssclredqtt rrwlqqllhn
      301 vgvnrvptlq agagfdhmlv n
//
LOCUS       XP_016734778             320 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 9 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016734778
VERSION     XP_016734778.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879289.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734778.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..320
                     /product="CCR4-NOT transcription complex subunit 9 isoform
                     X2"
                     /calculated_mol_wt=35205
     Region          43..300
                     /region_name="Rcd1"
                     /note="Cell differentiation family, Rcd1-like; pfam04078"
                     /db_xref="CDD:461160"
     CDS             1..320
                     /gene="LOC107945315"
                     /coded_by="XM_016879289.2:93..1055"
                     /db_xref="GeneID:107945315"
ORIGIN      
        1 mqtgnlpqsl smnspfggps asnptvagap ankdrkmata ehlvldlsnp dlrenallel
       61 skrelfqdla pllwnsfgti aallqeivsi ypvlsppnlt paqsnrvcna lallqcvash
      121 pdtrmlflna hiplylypfl nttsksrpfe ylrltslgvi galvkvddte visfllstei
      181 iplclrtmem gselsktvat fivqkilldd vgldyictta erffavgrvl gnmvaalaeq
      241 pssrllkhii rcylrlsdnp racdalrscl pdmlrdvtfs sclredqttr rwlqqllhnv
      301 gvnrvptlqa gagfdhmlvn
//
LOCUS       XP_016734765             321 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 9 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016734765
VERSION     XP_016734765.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879276.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734765.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="CCR4-NOT transcription complex subunit 9 isoform
                     X3"
                     /calculated_mol_wt=35333
     Region          43..301
                     /region_name="Rcd1"
                     /note="Cell differentiation family, Rcd1-like; pfam04078"
                     /db_xref="CDD:461160"
     CDS             1..321
                     /gene="LOC107945315"
                     /coded_by="XM_016879276.2:183..1148"
                     /db_xref="GeneID:107945315"
ORIGIN      
        1 mqtgnlpqsl smnspfggps asnptvagap ankdrkmata ehlvldlsnp dlrenallel
       61 skkrelfqdl apllwnsfgt iaallqeivs iypvlsppnl tpaqsnrvcn alallqcvas
      121 hpdtrmlfln ahiplylypf lnttsksrpf eylrltslgv igalvkvddt evisfllste
      181 iiplclrtme mgselsktva tfivqkilld dvgldyictt aerffavgrv lgnmvaalae
      241 qpssrllkhi ircylrlsdn pracdalrsc lpdmlrdvtf ssclredqtt rrwlqqllhn
      301 vgvnrvptlq agagfdhmlv n
//
LOCUS       XP_040941789             564 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040941789
VERSION     XP_040941789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085855.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..564
                     /product="pentatricopeptide repeat-containing protein
                     At3g02650, mitochondrial"
                     /calculated_mol_wt=62900
     Region          187..211
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <188..>544
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          223..250
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          256..285
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          297..320
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          365..391
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          399..426
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          432..461
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          467..495
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          502..532
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..564
                     /gene="LOC121212653"
                     /coded_by="XM_041085855.1:228..1922"
                     /db_xref="GeneID:121212653"
ORIGIN      
        1 mwrsmsarsr llmvarefgv tqmnqvlrrk rlhsfpkasl spilhrffsh ssanpsddss
       61 pgftdpqldf iagietsntq vpsleglavd etgmdsfvtg dskidmeeet qayeidgnkl
      121 envlsllqsr vdgslesnln amdldlhedf vvkvvetpyi lgenlirflk wvmekpgfdv
      181 tatvvdslvk iicsdarmkn ayglwdlvkk igekregvln vgvlnelial fsklgkgkaa
      241 mevfdkfadf gcvpnedsfy ftvealcrrs fydwgwsvce kmlseeslpd gervgkiisw
      301 fckggkakea htvyfsakgk nkvlprssvn iligslckkd etvklaleml dgfsgderky
      361 aikpfsavvr glcrtknvde aknvilkmie qgpppgnavf nsvvngyska gdmekakevm
      421 klmetrglkp dvytytvims gyanggqmdq aceilseakk khtklspaty htlirgycki
      481 eefdkalnll aemkdfgvqp nvdeynkliq slclkvldwq taeklfdemk englylngit
      541 rslimavkel esegtdimea ttka
//
LOCUS       XP_016734733             363 aa            linear   PLN 06-AUG-2024
DEFINITION  ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016734733
VERSION     XP_016734733.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734733.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..363
                     /product="ETHYLENE INSENSITIVE 3-like 3 protein isoform
                     X1"
                     /calculated_mol_wt=40874
     Region          1..>359
                     /region_name="EIN3"
                     /note="Ethylene insensitive 3; cl04813"
                     /db_xref="CDD:414191"
     CDS             1..363
                     /gene="LOC107945288"
                     /coded_by="XM_016879244.2:187..1278"
                     /db_xref="GeneID:107945288"
ORIGIN      
        1 maelddtggd iswdievsel krdnmgeedv sdeeiradel errmwkdsvr lrrikererv
       61 aaqqaaelnq tselarrkki srvqdgilkn mlmlmevyna rgfvygivpe ngkavsgasd
      121 nlrawwkekv nfdkngpaai vkyeaeclam nvsdrnrngn pcsslqdlqd atigsllstl
      181 mqhcdppqrk yplekrippp wwptgnedww vklglqrgds ppykkphdlk kmwkvgvlta
      241 vikhmspdia kiqrhvlqsk clqgkltake saiwlgvlgr eealirtssi teisrgghad
      301 snnvvgnqir svssknngrn qltdaepval ignddaplvq edvpvekqsr rkrprlrssr
      361 ggr
//
LOCUS       XP_016734749             339 aa            linear   PLN 06-AUG-2024
DEFINITION  ETHYLENE INSENSITIVE 3-like 3 protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016734749
VERSION     XP_016734749.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879260.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734749.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..339
                     /product="ETHYLENE INSENSITIVE 3-like 3 protein isoform
                     X2"
                     /calculated_mol_wt=38183
     Region          3..>335
                     /region_name="EIN3"
                     /note="Ethylene insensitive 3; cl04813"
                     /db_xref="CDD:414191"
     CDS             1..339
                     /gene="LOC107945288"
                     /coded_by="XM_016879260.2:244..1263"
                     /db_xref="GeneID:107945288"
ORIGIN      
        1 mgeedvsdee iradelerrm wkdsvrlrri kerervaaqq aaelnqtsel arrkkisrvq
       61 dgilknmlml mevynargfv ygivpengka vsgasdnlra wwkekvnfdk ngpaaivkye
      121 aeclamnvsd rnrngnpcss lqdlqdatig sllstlmqhc dppqrkyple kripppwwpt
      181 gnedwwvklg lqrgdsppyk kphdlkkmwk vgvltavikh mspdiakiqr hvlqskclqg
      241 kltakesaiw lgvlgreeal irtssiteis rgghadsnnv vgnqirsvss knngrnqltd
      301 aepvalignd daplvqedvp vekqsrrkrp rlrssrggr
//
LOCUS       XP_040941790             136 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H3.2 [Gossypium hirsutum].
ACCESSION   XP_040941790
VERSION     XP_040941790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085856.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..136
                     /product="histone H3.2"
                     /calculated_mol_wt=15137
     Region          1..136
                     /region_name="PTZ00018"
                     /note="histone H3; Provisional"
                     /db_xref="CDD:185400"
     Site            order(40..48,50,64..67,70,73,84..87,117..119,121)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(45,48,51..52,55..56,58,60,62..63,67..68,70..72,
                     74..75,77,79,82..86,88..89,92..93,96..98,100..102,
                     104..106,109,118..122,126,129)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(49,52..53,56..57,59,95,99,102,109,113,118)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(107,110..111,114..115,117,123..124,127..128,
                     130..132)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..136
                     /gene="LOC121212654"
                     /coded_by="XM_041085856.1:96..506"
                     /db_xref="GeneID:121212654"
ORIGIN      
        1 martkqtark stggkaprkq latkaarksa patggvkkph rfrpgtvalr eirkyqkste
       61 llirklpfqr lvreiaqdfk tdlrfqssav aalqeaaeay lvglfedtnl caihakrvti
      121 mpkdiqlarr irgera
//
LOCUS       XP_016734722             446 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016734722
VERSION     XP_016734722.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734722.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..446
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49559
     CDS             1..446
                     /gene="LOC107945277"
                     /coded_by="XM_016879233.2:199..1539"
                     /db_xref="GeneID:107945277"
ORIGIN      
        1 meeavsadma vappssrvsl spfspvrrrr rrlsvhfadl srpvvssatr larvslqgrl
       61 vnaeeassar tvggglgcke avawelfspi erflivavig vataeskknw lishlrksve
      121 lrdevlssmq qkvdnlceql nngdekprtg akievgtpln etfgsgsmkv ddcgcwicyq
      181 hrdqfkgnym vknssgsvtp lpneteqeer rmsdlsdwas svtsaseiql nnlaieqdif
      241 nlkreceekd aiikelntsv qstnmasskr iselediirr ksttitrlkk dmvvleqkvv
      301 hltrlqrpss stsspnywqt pvmtdnllyd mdsttspsss dsdclpkiqp qapvpkveev
      361 cfknndiald keqksapakv tssftgqtay rsmpepatpl reismnqrsk ppssrqrqvs
      421 asqdskrikk qtrsvskdst skkrwa
//
LOCUS       XP_040941791             364 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA damage-repair/toleration protein DRT100 [Gossypium hirsutum].
ACCESSION   XP_040941791
VERSION     XP_040941791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085857.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..364
                     /product="DNA damage-repair/toleration protein DRT100"
                     /calculated_mol_wt=39186
     Region          <92..>358
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          131..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..250
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          251..273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          274..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          298..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          322..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..364
                     /gene="LOC121212655"
                     /coded_by="XM_041085857.1:75..1169"
                     /db_xref="GeneID:121212655"
ORIGIN      
        1 mkpvftiisa lllaviatvn scppsdraal lafraalhep ylgifdswtg tdcchnwygv
       61 scdseshrva dinlrgesed piferahrtg ymtgfispei ckltrlssit iadwkgitge
      121 ipkcistlsf lrildlvgnk isgeipydig klnrltvlni adnqisgrip asltslsslm
      181 hldlrnnkis gpiprrigrl gmlsrallsg nqisgpipgs isriyrladl dlsmnkisgs
      241 ipaslgkmav latlnldcnk isgtipptll tssignlnls rnglagkipd vfgprsyftv
      301 idlsynklsg siprtltaaf yighldvsyn hlcgripaga pfdhleassf shnhclcgkp
      361 lrac
//
LOCUS       XP_040941792             419 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin-2 [Gossypium hirsutum].
ACCESSION   XP_040941792
VERSION     XP_040941792.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085858.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="extensin-2"
                     /calculated_mol_wt=47743
     CDS             1..419
                     /gene="LOC121212657"
                     /coded_by="XM_041085858.1:73..1332"
                     /db_xref="GeneID:121212657"
ORIGIN      
        1 makvwphlay alalcliini aatedepayd apppyyyisp qpspyiyepp llppyeykss
       61 pppppykyks pppppymyks pppppykyes pppppykyes pppppylyks pppppyvyks
      121 pppppyvyks pppppykyes pppppykyks pppppyayks ppspppykye spppppyvyk
      181 spppppykye spppppppyk yespppppyv ykspppppyk ykspppppyk ykspppppyv
      241 ykspppspyk ykspppppyk yespppppyk ykspppppyv ykspppppyk ykspppppyk
      301 yespppppyk ykspppppyv ykspppppyk yespppppya ykspppppyk yespppppyv
      361 ykspppppyk ykspppppyv ykspppppym ykspppplyk yespppyvyk sppppsyyk
//
LOCUS       XP_040941793            1131 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin-2-like [Gossypium hirsutum].
ACCESSION   XP_040941793
VERSION     XP_040941793.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085859.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1131
                     /product="extensin-2-like"
                     /calculated_mol_wt=121597
     CDS             1..1131
                     /gene="LOC107950556"
                     /coded_by="XM_041085859.1:72..3467"
                     /db_xref="GeneID:107950556"
ORIGIN      
        1 makiwpclay alalclliin nvaanddefy napqlyygkk pevpsrappy iyrppphpyq
       61 spspgytykf ppppsplppp pyvykspppp yvykspppps psppppyiyk sppppspklp
      121 ppyiyksppp pspsppppyv yksppppsps ppplyiyksp plpspsppph yiykspppps
      181 pkplppyiyk sppppspkpp ppyiyksppp pspsppppyi yksppppsfs ppppyiyksp
      241 pppspspppp yvykspppps psppppyvyk sppppppsps phspyiyksp pppsssspps
      301 yvykspppps psppppyvyk sppppspspp ppyvyksppp pspsppppyv ykspplpspl
      361 ppplyvykfp pppspsphpp yiykspplls psphppyvyk sppppsslpp ppyvyksppp
      421 pspsppppyi ykspppssps ppppyiyksp pppssspppp yvykspppps psppppyiyk
      481 sppppspspp plyiyksppp pspsspppyv yksphppsss ppppyvyksp plpshsppls
      541 yfykspppps pspplpyvyk sppppspslp ppyiyksppp pspsppppyi ykspppppyv
      601 yksppppspl pppsyvyksp pppspspppp yvyksppppp pspsppppcv yksppppsps
      661 psppyvyksp pspspsppll yvyksppppp psppppyiyk spplpspspp ppyvyksppl
      721 psssppppyv yksppppsps plppyiyksp pppspspppp yiykssppps ssppppyvyk
      781 slpppspspp ppyiyksppp psplppppyi yksppppsps pplpyvyksp pppshspppp
      841 yvykspppps hspppsyvyk sppppfpspp ppyvyksppp pspsppppyi yksppppsps
      901 ppppyiyksp pppshsplpp yvykspphps psppppyvyk sppppspspp ppyvyksppp
      961 lspspplpyv yksppppsps ppqtyvyksp pppslspppp yvyksppppf pslpppyvyk
     1021 sppppsssph ppyiyksppp pspsppppyi yksppppsls ppppyiyksp pppspspplp
     1081 hvykspppps psppppyvyk sppplspspp ppyvyksppp qspsppppyi y
//
LOCUS       XP_040941794             487 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin-2 [Gossypium hirsutum].
ACCESSION   XP_040941794
VERSION     XP_040941794.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085860.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..487
                     /product="extensin-2"
                     /calculated_mol_wt=52237
     CDS             1..487
                     /gene="LOC121212658"
                     /coded_by="XM_041085860.1:73..1536"
                     /db_xref="GeneID:121212658"
ORIGIN      
        1 maniwphlay vlalcllinn vaayydepyn tpppyyskkp etplprytyk splpsspppy
       61 tynspppppy fyqsppspsp spprpyayks pplpspsppp pyvykspppp spsppplyvy
      121 ksppppspsp pppyaykspp ppspsppppy vyksppppsp sppppyiyrs ppppppppsp
      181 sppppyvyks ppppspsppp pyvykspppp spsppppyiy ksppppspsp sppppyvyks
      241 ppppspsppp pyvyksphpp spsppspyiy rsppppppsp spppphvyks ppppspsppp
      301 pyiykspppp spsppppyvy ksplppspsp pppyiykspp ppspsppppy vyksppppsp
      361 sppppyvyks ppppspsppp pyvykspppp spsppspyvy ksppppspsp pppyvykspp
      421 ppspsipppy iykspsppsp sppppyvyks ppppspsppp pyvyrspppp spsppppyvy
      481 kppppyy
//
LOCUS       XP_016734652             297 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB83 [Gossypium hirsutum].
ACCESSION   XP_016734652
VERSION     XP_016734652.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734652.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..297
                     /product="transcription factor MYB83"
                     /calculated_mol_wt=33065
     Region          17..>129
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..297
                     /gene="LOC107945235"
                     /coded_by="XM_016879163.2:179..1072"
                     /db_xref="GeneID:107945235"
ORIGIN      
        1 mmrkpnngst itttnnklrk glwspeeddk linymltngq gcwsdvarna glqrcgkscr
       61 lrwinylrpd lkrgaispee eelivhlhsi lgnrwsqiaa rlpgrtdnei knfwnstikk
      121 rlknsspntp dsssskfskd snpvgfitme qqgvllptyl dlsstssnss lqstvtnpgt
      181 afgatigyfa tnvnglygen emlcgeelym ppletvrenl kientfesni ttipttnnnn
      241 innnnivdcs mksenvmtga aignfwlgee ikvgewdled lmkdvssfpf ldfqssi
//
LOCUS       XP_040941795             315 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941795
VERSION     XP_040941795.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085861.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="nuclear transcription factor Y subunit A-1
                     isoform X1"
                     /calculated_mol_wt=33694
     Region          171..232
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..315
                     /gene="LOC121212660"
                     /coded_by="XM_041085861.1:1136..2083"
                     /db_xref="GeneID:121212660"
ORIGIN      
        1 mqsnseegsr lepavhgvhp tavysepkwr ntgygaispg vrgvnslnss smectnases
       61 ndgqslsnga lneeddvnke tqttassrav gtggqehhnl qhvgssmpav rdegltqppl
      121 lelvghsiac asnpyidply ggmmaayghq pmgyppfvgm pharmtlpie maqepvyvna
      181 kqyqgilrrr qarakaelek kvvksrkpyl hesrhqhalr rargsggrfa kktdtnpgee
      241 kgsgsgptls sqspsssgse plqtdsnetw tssltqhgih hvnggshyqk lggnisnqaa
      301 fypvnggqsf qklkg
//
LOCUS       XP_040941796             315 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941796
VERSION     XP_040941796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085862.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..315
                     /product="nuclear transcription factor Y subunit A-1
                     isoform X1"
                     /calculated_mol_wt=33694
     Region          171..232
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..315
                     /gene="LOC121212660"
                     /coded_by="XM_041085862.1:190..1137"
                     /db_xref="GeneID:121212660"
ORIGIN      
        1 mqsnseegsr lepavhgvhp tavysepkwr ntgygaispg vrgvnslnss smectnases
       61 ndgqslsnga lneeddvnke tqttassrav gtggqehhnl qhvgssmpav rdegltqppl
      121 lelvghsiac asnpyidply ggmmaayghq pmgyppfvgm pharmtlpie maqepvyvna
      181 kqyqgilrrr qarakaelek kvvksrkpyl hesrhqhalr rargsggrfa kktdtnpgee
      241 kgsgsgptls sqspsssgse plqtdsnetw tssltqhgih hvnggshyqk lggnisnqaa
      301 fypvnggqsf qklkg
//
LOCUS       XP_040941797             254 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941797
VERSION     XP_040941797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085863.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..254
                     /product="nuclear transcription factor Y subunit A-1
                     isoform X2"
                     /calculated_mol_wt=27784
     Region          110..171
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..254
                     /gene="LOC121212660"
                     /coded_by="XM_041085863.1:1296..2060"
                     /db_xref="GeneID:121212660"
ORIGIN      
        1 mkrmmlikkh kllhplgqle ledknitics mldlacllcv mkaspnlpcl sllviqsips
       61 flpillqaca snpyidplyg gmmaayghqp mgyppfvgmp harmtlpiem aqepvyvnak
      121 qyqgilrrrq arakaelekk vvksrkpylh esrhqhalrr argsggrfak ktdtnpgeek
      181 gsgsgptlss qspsssgsep lqtdsnetwt ssltqhgihh vnggshyqkl ggnisnqaaf
      241 ypvnggqsfq klkg
//
LOCUS       XP_016734576             689 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfite reductase [ferredoxin], chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016734576
VERSION     XP_016734576.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734576.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..689
                     /product="sulfite reductase [ferredoxin], chloroplastic"
                     /calculated_mol_wt=78039
     Region          21..640
                     /region_name="PLN00178"
                     /note="sulfite reductase"
                     /db_xref="CDD:177773"
     CDS             1..689
                     /gene="LOC107945202"
                     /coded_by="XM_016879087.2:144..2213"
                     /db_xref="GeneID:107945202"
ORIGIN      
        1 mttsfgtttg tltptdpkir fqsftglkss nsialtrnlr vfplpfctpt liravstplk
       61 petstaepkr skveifkeqs nfiryplnee iytdtpnine astqlikfhg syqqynrder
      121 gtrsysfmlr tknpggkvpn qlyltmddla dqfgigtlrl ttrqtfqlhg vlkkdlktvm
      181 stiirnmgst lgacgdlnrn vlapaapfmt keykfaqeta eniaalltpq sgfyydvwvd
      241 gekfmtsepp evvkarndns hgtnfpdspe piygtqflpr kfkiavtvpt dnsvdiltnd
      301 igvvvvfden gepqgfniyv gggmgrthrq ettfprlgep lgyvpkgdil yaikaivatq
      361 rdhgrrddrk ysrmkyliss wgiekfrnvv eqyygkkfep fhelpewefk sylgwheqgd
      421 galfcglhvd ngriggkmkk tlreviekyn lnvritpnqn lilcdirsaw rrpittvlaq
      481 agllhpryvd plnltamacp afplcplait eaergipdil krvravfekv glkysesivi
      541 rvtgcpngca rpymaelglv gdgpnsyqiw lggtpnqtql artfmnkvkv qdlekvfepl
      601 fyywkrkrqp kesfgdfttr mgfeklhelv dkwegpvqsp vrynlkpfad ketyeameel
      661 aklqnksphq lamevirnfv aaqqngkse
//
LOCUS       XP_016740760             381 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETICULATA-RELATED 4, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016740760
VERSION     XP_016740760.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016740760.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..381
                     /product="protein RETICULATA-RELATED 4, chloroplastic"
                     /calculated_mol_wt=41020
     Region          146..323
                     /region_name="RETICULATA-like"
                     /note="Protein RETICULATA-related; pfam11891"
                     /db_xref="CDD:432167"
     CDS             1..381
                     /gene="LOC107950398"
                     /coded_by="XM_016885271.2:139..1284"
                     /db_xref="GeneID:107950398"
ORIGIN      
        1 msaatslftp fppfsplpkt tskfsttfrl rlpspittir hrkhspfptf stlpgggnns
       61 aggggnndng kgkggsgggd enagdenrke amivlaeagr smetlptdla daiqagkvpg
      121 svidrflgle ksdlmrwlmq fdgfkerlla ddlffakvfi ecgvgiftkt aaeyerrren
      181 ffkeleivfa dvvmaiiadf mlvylpaptv slqpslaasa gviskffhgc pdnafqvalh
      241 gtsysllqrl gavmrngakl favgttsslv gtaatnalin akkavdkssv deienvpils
      301 tsvaygvyma issnlryqvl agvieqrvle pllhqhkfll sticfairtg ntylgsllwv
      361 dyarlvgiqk pqeeenpvlv s
//
LOCUS       XP_040941798             532 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 22 [Gossypium hirsutum].
ACCESSION   XP_040941798
VERSION     XP_040941798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085864.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..532
                     /product="zinc finger CCCH domain-containing protein 22"
                     /calculated_mol_wt=59007
     Region          145..167
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          238..307
                     /region_name="RRM_AtC3H46_like"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana zinc finger CCCH domain-containing protein 46
                     (AtC3H46) and similar proteins; cd12458"
                     /db_xref="CDD:409891"
     CDS             1..532
                     /gene="LOC107939450"
                     /coded_by="XM_041085864.1:353..1951"
                     /db_xref="GeneID:107939450"
ORIGIN      
        1 mdsyeatriv fsriqnldpe naskiigyll lqdhgdkemi rlafgpeali hslifkakth
       61 lglpisnpps psppppfsya gvvngcaksl hgvaandnvg fvddfqfqeh vsdyltggsg
      121 gyadstlhrr sfsvpglclt gedlkpclyf argfckngsk ckfihgdhca enelehcqel
      181 lrsksfqqaa atvtasqfma ggaslpyrsp lmitdelhky grcraeaamg ansnsrqiyl
      241 tfpadstfke edvsnyfsiy gpvqdvripy qqkrmfgfvt fvypetvkli lskgnphfvc
      301 dsrvlvkpyk ekgkvhekkq qqlergeysa tpvdsrepfd lqlgtrmfyn aqemmlrrkl
      361 eeqadlqqai elqgrrlmnl qlldlknqhh ssfhhslstg spipsptvsr iptnqarifp
      421 veatledngg lkspaadkll eevkpvcnhk sdngitvtke dkanteqndf pqslehilpd
      481 nlfaspkkst gecftvftde knrspantsg lnvaslkscf lqlprfssgq ga
//
LOCUS       XP_016728286            1287 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728286
VERSION     XP_016728286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872797.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1287
                     /product="uncharacterized protein"
                     /calculated_mol_wt=141073
     Region          717..745
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(718,721..722,725..726,728,762,765..766,769..770,
                     772..773,796,799..800,803..804,807)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          720..>910
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          750..790
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          795..823
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          884..917
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          922..969
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          952..>1099
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1001..1030
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1002..1003,1006..1007,1009,1037,1040..1041,
                     1044..1045,1047..1048,1071,1074..1075,1078..1079,1082)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1035..1065
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1070..1098
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1145..1227
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(1173..1175,1204,1207..1208,1211..1212)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..1287
                     /gene="LOC107939461"
                     /coded_by="XM_016872797.2:198..4061"
                     /db_xref="GeneID:107939461"
ORIGIN      
        1 mspalidpgg asssapngqv ssvpftlnsf gsfsvsqskf sqekmnpsss fgfgsdfnsg
       61 fsdsnpnnpd fsfntpstqr psaglarprf vkirkqldsh nlkssgdlgt rlgpgfnpfr
      121 svsgvpgpgg nleggvvnem rnlrigkscg lgdqslvfkl pdelrklnie dgskgnwsnv
      181 ndsnvggyvg egvetgklpd elqsklnikg gedfvdgskk vfvftggkgs dslvgsstga
      241 vrdriknlni kgsddskmne ktgeksghlg gerekvlste merklnigsv sgdstaqtdk
      301 gfsssqifgn dvrteklddk kleefgnslh kesvfqaats glypsdirpg eaaasstlfs
      361 sttmhfqpga ksfgstsskp ekkdgsgfta kqdtidtpfv efktphsqan mffglnkkle
      421 fsakketskt tkvkkrkgkl kqptpvqlwh gpdfvssktg trdnadaley spmdvspyqe
      481 tladtrcsre ssvasdesrp avpndaided lvtatqhmdi kgsekdeikm egygdvfnka
      541 vateapqeds vsgaetesfi saveeiddns dialssaeke vtsrlnierq dsdtqmyfss
      601 tsnsehisgc dftfaasssa qsqlssptry qrkknsakis fdtpysgsnv ripcasssaq
      661 fspytgaslh lsplqgqktd lstlqsnvgg nsmvnkglei khkpnltgas taaqescekw
      721 rlrgnqayan gdsskaeesy tqgiscipes etsksclral mlcysnraat rmslgrmkda
      781 lgdcmmamai dpsfsrvqlr aancylalge vensaryfrk clqsgidvcf drkvaleasd
      841 glqktqkvse cmhqstellq rrtsdggesa leliaealki smysekllem kaealfilhk
      901 yeeviqlcek tfdsaeknsl sfdsngqian ldsssfskdl tfrvwrcrmi fnsyfhlgkl
      961 eeaiaflekk eelqssmyrd gsnslessip laatvrells hkaagnkafq lgrhleaveh
     1021 ytaalsgnme srpfsaicfc nraaaykalg qitdaiadcs laialngnyl kaisrratly
     1081 emvrdydqaa sdierfisll mkqmeektnq igttdrsmnf andlrqarlw lseieeedkk
     1141 evpldfylil gvepsvsaae ikkayrksal rhhpdkavqs lvrhengddk lwkeikeeay
     1201 kdadklfkii geayailsdp ikrsrydlee esrnvqkkrt gatsratttd aqsysvdrsr
     1261 qhwrevrrsy gfstskaset trsnrfh
//
LOCUS       XP_016728295             504 aa            linear   PLN 06-AUG-2024
DEFINITION  hexokinase-3 [Gossypium hirsutum].
ACCESSION   XP_016728295
VERSION     XP_016728295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872806.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..504
                     /product="hexokinase-3"
                     /calculated_mol_wt=54693
     Region          33..504
                     /region_name="PLN02914"
                     /note="hexokinase; cl42853"
                     /db_xref="CDD:456198"
     CDS             1..504
                     /gene="LOC107939469"
                     /coded_by="XM_016872806.2:434..1948"
                     /db_xref="GeneID:107939469"
ORIGIN      
        1 mgkvvlgvav gvavaactva alvvgrrvrs rrkwkrvvgv lkeleescet tvgrlkqvvd
       61 amavemhagl aseggsklkm lltfvdslps gsekgifyal dlggtnfrvl rvelggqrsd
      121 ldpdveqqpi peqlmtgrse dlfdfiassl yqfvekndsv qspitkllgf tfsfpvkqts
      181 vssgvlikwt kgfairdmae kevagalqqa ltrkglnmrv svlvndtvgt lalghyhdad
      241 tvaaviigtg tnacywertd aiikcqgllt tsggmvvnme wgnfwsshlp rtsydvklda
      301 espnpndqgf ekmisgmylg divrrvilrm seesdvfgpv ssrlyvpftl rtplmaamhe
      361 ddspeltqva rilkdfldip diplkarklv vkicdvvtrr aarlaaagiv gilkkigrdg
      421 sggitggrsr sdikmrrtav avegslytqy tmfreylhea lneilgedia rhvviivted
      481 gsgtgaalla ashssenvnn iqli
//
LOCUS       XP_016728290             864 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear cap-binding protein subunit 1 [Gossypium hirsutum].
ACCESSION   XP_016728290
VERSION     XP_016728290.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872801.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728290.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..864
                     /product="nuclear cap-binding protein subunit 1"
                     /calculated_mol_wt=97820
     Region          23..205
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          303..465
                     /region_name="MIF4G_like"
                     /note="MIF4G like; pfam09088"
                     /db_xref="CDD:370287"
     Region          499..>685
                     /region_name="MIF4G_like_2"
                     /note="MIF4G like; pfam09090"
                     /db_xref="CDD:462675"
     CDS             1..864
                     /gene="LOC107939466"
                     /coded_by="XM_016872801.2:140..2734"
                     /db_xref="GeneID:107939466"
ORIGIN      
        1 msswrnlllr igdksseyss ssdfkdhiet cfgalrrelg hssaeilsfl lqcaeqlphk
       61 iplygtligl lnlededfvk qiventqnsf qdaldsgncd girilmrflt almcskvlqp
      121 tslvvvfetl lssaaitvde ekgnpswqar adfyvicils clpwggaela eqvpeeierv
      181 lvgiqaylsi rrhtsdsgls ffeedesggd vekdfledlw eriqvlssng wkvesvprph
      241 lsfeaqlvag kshefgpisc peqpelpsti savaygkqkh daelkypqrm rrlnifpask
      301 tedlqpidrf vveeslldvl lffngcrkec aafmvglpvp fryeylmaet ifsqllllpq
      361 ppfkpiyytl vimdlckalp gafpavvaga vralfdkiad ldmecrtrli lwfshhlsnf
      421 qfiwpweewa yvldlpkwap qrvfvqevle revrlsywdk ikqsienapa leellppkgg
      481 pnfkysgadd qekteqeqal saelsnkvkg rqsareiilw ieenvypihg qeitlsvviq
      541 tlldigsksf thlitvlery gqvmaklcsd qdkqvmlise vgsywknnaq mtaiaidrmm
      601 gyrlisnlai vrwvfspeni eqfhisdrpw evlrnavskt ynritdlrke isslkksvvs
      661 aeeaaskaka dleaaesklt lvegepvlge nptklkhlks vaektkeetv smhdsleake
      721 allaralden evlflslykn fsnvlmerlp dasrdgtlqs lksvngdsma vdieepstme
      781 vddenerpkk sqsnggkttn gynvrekeqw clstlgyvka fsrqyaseiw phiekldaev
      841 ftedahplfr kavysglrrl snel
//
LOCUS       XP_040941799             401 aa            linear   PLN 06-AUG-2024
DEFINITION  serine--glyoxylate aminotransferase [Gossypium hirsutum].
ACCESSION   XP_040941799
VERSION     XP_040941799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085865.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..401
                     /product="serine--glyoxylate aminotransferase"
                     /calculated_mol_wt=44030
     Region          1..401
                     /region_name="PLN02409"
                     /note="serine--glyoxylate aminotransaminase"
                     /db_xref="CDD:178031"
     CDS             1..401
                     /gene="LOC107939451"
                     /coded_by="XM_041085865.1:1080..2285"
                     /db_xref="GeneID:107939451"
ORIGIN      
        1 mdnfyapgkn hlfvpgpvni pepviramnr nnedyrspai pamtktlled vkkifktttg
       61 tpfmipttgt gawesaltnt lspgdrivsf ligqfsllwi dqqqrlkfnv dvvesewgqg
      121 anldvlaekl aadrthtika icivhnetat gvtnnlatvr klldhyghpa lllvdgvssi
      181 caldfrmdew gvdvaltgsq kalslptgig ivcaspkale atktaksvrv ffdwndylkf
      241 yklgtfwpyt psiqllyglr aaldlifeeg ldnvierhsr lgkatrlave awglknctqk
      301 eewfsdtvta vlvppyidss eivkrawkry nlslglglnk vagkvfrigh lgnlnelqll
      361 gclagvemil kdvgypvklg sgvaaasayl qnnipmipsr i
//
LOCUS       XP_016728283            1774 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHROMATIN REMODELING 5 [Gossypium hirsutum].
ACCESSION   XP_016728283
VERSION     XP_016728283.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872794.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1774
                     /product="protein CHROMATIN REMODELING 5"
                     /calculated_mol_wt=202688
     Region          <76..383
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          421..501
                     /region_name="CD1_tandem"
                     /note="repeat 1 of paired tandem chromodomains; cd18660"
                     /db_xref="CDD:349307"
     Site            order(423,471,473..474,478)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349307"
     Region          534..590
                     /region_name="CD2_tandem"
                     /note="repeat 2 of paired tandem chromodomains; cd18659"
                     /db_xref="CDD:349306"
     Site            order(557,574)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349306"
     Region          615..1494
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          1541..1631
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     CDS             1..1774
                     /gene="LOC107939460"
                     /coded_by="XM_016872794.2:391..5715"
                     /db_xref="GeneID:107939460"
ORIGIN      
        1 macfrnysnd tishdalegk sqgrnsgril ssaenedidg tyserefdin mdaqyqsdgv
       61 gisnseqsrl hhevatdnga gisnsnfqpa grriapgrwg stfwkdcqpm drqggsdsgq
      121 esksdhknle gsvynssddr ddrlesevde aqkevgksqr ghsdvpadem lsdeyyeqdg
      181 eeqsdtmhys gfgnsvglnt rpqskhvsvs tnvsrssral nkrnydnedd nddnnddvda
      241 dyeeeeeede ddpddvdfep dyglanshag nkdkdwdged seeednrhgd ldvsdeddsy
      301 ykkkpkgrqq ikvgpnvkpt rehkssnrqr rgrssfeede ysaedsdses dgdfksmarr
      361 sgnnhkinar sntltsmgrn nevrtsgrsv rkvsyvesee seeidegkkk ktrkdeaeee
      421 dgdtiekvlw hqpkgmaeda irnnrstepv llshlfvsep dwsemeflik wkgqshlhcq
      481 wksiselqnl sgfkkvlnyt kkvmedvryr kslsreeiev ndvskemdld likqnsqver
      541 vivdriskda fgnvmseylv kwqglsyaea twekdidipf aqdaideyka reaamavqgk
      601 mvdhqrkkgk aslrkldeqp ewlrggklrd yqleglnflv nswrndtnvi lademglgkt
      661 vqsvsmlgfl qnaqqipgpf lvvvplstls nwakefrkwl pdmniivyvg trasrevcqq
      721 yefyndkkig rpikfnallt tyevvlkdka vlskikwnyl mvdeahrlkn seaqlyttls
      781 efstknklli tgtplqnsve elwallhfld pdkfknkddf vqnyknlssf neielanlhm
      841 elrphilrrv ikdvekslpp kierilrvem splqkqyykw ilernfhdln kgvrgnqvsl
      901 lnivvelkkc cnhpflfesa dhgyggdtgm ndisklerii lssgklvild kllmrlhetk
      961 hrvlifsqmv rmldilaeym slrgfqfqrl dgstkaelrq qamdhfnapg sddfcfllst
     1021 ragglginla tadtviifds dwnpqndlqa msrahrigqq evvniyrfvt sksveedile
     1081 rakkkmvldh lviqklnaeg rlerketkkg ayfdknelsa ilrfgaeelf kedkndeesk
     1141 krllsmdide ileraekvee kvseeegnel lsafkvanfc saeddgsfws rwikpdaiaq
     1201 aedalapraa rntksyaets qpersnkrkk kgsdlqeqqe rvpkrrkaey sapsapmieg
     1261 ataqvrgwsy gnlpkrdalr fsravmkfgn esqvtliaee vggavaaapl daqielfnal
     1321 vegcreavel gniepkgpll dffgvpvkan dlinrvqelq llakrisrye dpikqfrvlm
     1381 ylkpsnwskg cgwnqiddar lllgiyyhgf gnwekirlde rlgltkkiap aelqhhetfl
     1441 prapnlkera nallemelaa vggknagvka grkpskkekq nplnvsishv rdkkgkpgst
     1501 kvsfkmgrdk terpqkvepl vkeegemsdn eevyeqfkev kwmewcedvm ideiktlrrl
     1561 qrlqttsadl pkdkvlskir nylqllgrri dqivlehede lyrqdrmtmr lwnyvstfsn
     1621 lsgerlhqiy sklkqeqddd ggvgpshmng stpghvdrdg dpnffppfsr stdkqrgykk
     1681 natahqtsqp ihkgidtakf eawkrwraet vnhpqlqppt qrplnngstr vvdpnslgil
     1741 gagpsdkrlv nterpfrmrq tgfpqrqgfp sgik
//
LOCUS       XP_016728284            1774 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHROMATIN REMODELING 5 [Gossypium hirsutum].
ACCESSION   XP_016728284
VERSION     XP_016728284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872795.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1774
                     /product="protein CHROMATIN REMODELING 5"
                     /calculated_mol_wt=202688
     Region          <76..383
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          421..501
                     /region_name="CD1_tandem"
                     /note="repeat 1 of paired tandem chromodomains; cd18660"
                     /db_xref="CDD:349307"
     Site            order(423,471,473..474,478)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349307"
     Region          534..590
                     /region_name="CD2_tandem"
                     /note="repeat 2 of paired tandem chromodomains; cd18659"
                     /db_xref="CDD:349306"
     Site            order(557,574)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349306"
     Region          615..1494
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          1541..1631
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     CDS             1..1774
                     /gene="LOC107939460"
                     /coded_by="XM_016872795.2:478..5802"
                     /db_xref="GeneID:107939460"
ORIGIN      
        1 macfrnysnd tishdalegk sqgrnsgril ssaenedidg tyserefdin mdaqyqsdgv
       61 gisnseqsrl hhevatdnga gisnsnfqpa grriapgrwg stfwkdcqpm drqggsdsgq
      121 esksdhknle gsvynssddr ddrlesevde aqkevgksqr ghsdvpadem lsdeyyeqdg
      181 eeqsdtmhys gfgnsvglnt rpqskhvsvs tnvsrssral nkrnydnedd nddnnddvda
      241 dyeeeeeede ddpddvdfep dyglanshag nkdkdwdged seeednrhgd ldvsdeddsy
      301 ykkkpkgrqq ikvgpnvkpt rehkssnrqr rgrssfeede ysaedsdses dgdfksmarr
      361 sgnnhkinar sntltsmgrn nevrtsgrsv rkvsyvesee seeidegkkk ktrkdeaeee
      421 dgdtiekvlw hqpkgmaeda irnnrstepv llshlfvsep dwsemeflik wkgqshlhcq
      481 wksiselqnl sgfkkvlnyt kkvmedvryr kslsreeiev ndvskemdld likqnsqver
      541 vivdriskda fgnvmseylv kwqglsyaea twekdidipf aqdaideyka reaamavqgk
      601 mvdhqrkkgk aslrkldeqp ewlrggklrd yqleglnflv nswrndtnvi lademglgkt
      661 vqsvsmlgfl qnaqqipgpf lvvvplstls nwakefrkwl pdmniivyvg trasrevcqq
      721 yefyndkkig rpikfnallt tyevvlkdka vlskikwnyl mvdeahrlkn seaqlyttls
      781 efstknklli tgtplqnsve elwallhfld pdkfknkddf vqnyknlssf neielanlhm
      841 elrphilrrv ikdvekslpp kierilrvem splqkqyykw ilernfhdln kgvrgnqvsl
      901 lnivvelkkc cnhpflfesa dhgyggdtgm ndisklerii lssgklvild kllmrlhetk
      961 hrvlifsqmv rmldilaeym slrgfqfqrl dgstkaelrq qamdhfnapg sddfcfllst
     1021 ragglginla tadtviifds dwnpqndlqa msrahrigqq evvniyrfvt sksveedile
     1081 rakkkmvldh lviqklnaeg rlerketkkg ayfdknelsa ilrfgaeelf kedkndeesk
     1141 krllsmdide ileraekvee kvseeegnel lsafkvanfc saeddgsfws rwikpdaiaq
     1201 aedalapraa rntksyaets qpersnkrkk kgsdlqeqqe rvpkrrkaey sapsapmieg
     1261 ataqvrgwsy gnlpkrdalr fsravmkfgn esqvtliaee vggavaaapl daqielfnal
     1321 vegcreavel gniepkgpll dffgvpvkan dlinrvqelq llakrisrye dpikqfrvlm
     1381 ylkpsnwskg cgwnqiddar lllgiyyhgf gnwekirlde rlgltkkiap aelqhhetfl
     1441 prapnlkera nallemelaa vggknagvka grkpskkekq nplnvsishv rdkkgkpgst
     1501 kvsfkmgrdk terpqkvepl vkeegemsdn eevyeqfkev kwmewcedvm ideiktlrrl
     1561 qrlqttsadl pkdkvlskir nylqllgrri dqivlehede lyrqdrmtmr lwnyvstfsn
     1621 lsgerlhqiy sklkqeqddd ggvgpshmng stpghvdrdg dpnffppfsr stdkqrgykk
     1681 natahqtsqp ihkgidtakf eawkrwraet vnhpqlqppt qrplnngstr vvdpnslgil
     1741 gagpsdkrlv nterpfrmrq tgfpqrqgfp sgik
//
LOCUS       XP_016728285            1774 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHROMATIN REMODELING 5 [Gossypium hirsutum].
ACCESSION   XP_016728285
VERSION     XP_016728285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872796.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1774
                     /product="protein CHROMATIN REMODELING 5"
                     /calculated_mol_wt=202688
     Region          <76..383
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          421..501
                     /region_name="CD1_tandem"
                     /note="repeat 1 of paired tandem chromodomains; cd18660"
                     /db_xref="CDD:349307"
     Site            order(423,471,473..474,478)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349307"
     Region          534..590
                     /region_name="CD2_tandem"
                     /note="repeat 2 of paired tandem chromodomains; cd18659"
                     /db_xref="CDD:349306"
     Site            order(557,574)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349306"
     Region          615..1494
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          1541..1631
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     CDS             1..1774
                     /gene="LOC107939460"
                     /coded_by="XM_016872796.2:456..5780"
                     /db_xref="GeneID:107939460"
ORIGIN      
        1 macfrnysnd tishdalegk sqgrnsgril ssaenedidg tyserefdin mdaqyqsdgv
       61 gisnseqsrl hhevatdnga gisnsnfqpa grriapgrwg stfwkdcqpm drqggsdsgq
      121 esksdhknle gsvynssddr ddrlesevde aqkevgksqr ghsdvpadem lsdeyyeqdg
      181 eeqsdtmhys gfgnsvglnt rpqskhvsvs tnvsrssral nkrnydnedd nddnnddvda
      241 dyeeeeeede ddpddvdfep dyglanshag nkdkdwdged seeednrhgd ldvsdeddsy
      301 ykkkpkgrqq ikvgpnvkpt rehkssnrqr rgrssfeede ysaedsdses dgdfksmarr
      361 sgnnhkinar sntltsmgrn nevrtsgrsv rkvsyvesee seeidegkkk ktrkdeaeee
      421 dgdtiekvlw hqpkgmaeda irnnrstepv llshlfvsep dwsemeflik wkgqshlhcq
      481 wksiselqnl sgfkkvlnyt kkvmedvryr kslsreeiev ndvskemdld likqnsqver
      541 vivdriskda fgnvmseylv kwqglsyaea twekdidipf aqdaideyka reaamavqgk
      601 mvdhqrkkgk aslrkldeqp ewlrggklrd yqleglnflv nswrndtnvi lademglgkt
      661 vqsvsmlgfl qnaqqipgpf lvvvplstls nwakefrkwl pdmniivyvg trasrevcqq
      721 yefyndkkig rpikfnallt tyevvlkdka vlskikwnyl mvdeahrlkn seaqlyttls
      781 efstknklli tgtplqnsve elwallhfld pdkfknkddf vqnyknlssf neielanlhm
      841 elrphilrrv ikdvekslpp kierilrvem splqkqyykw ilernfhdln kgvrgnqvsl
      901 lnivvelkkc cnhpflfesa dhgyggdtgm ndisklerii lssgklvild kllmrlhetk
      961 hrvlifsqmv rmldilaeym slrgfqfqrl dgstkaelrq qamdhfnapg sddfcfllst
     1021 ragglginla tadtviifds dwnpqndlqa msrahrigqq evvniyrfvt sksveedile
     1081 rakkkmvldh lviqklnaeg rlerketkkg ayfdknelsa ilrfgaeelf kedkndeesk
     1141 krllsmdide ileraekvee kvseeegnel lsafkvanfc saeddgsfws rwikpdaiaq
     1201 aedalapraa rntksyaets qpersnkrkk kgsdlqeqqe rvpkrrkaey sapsapmieg
     1261 ataqvrgwsy gnlpkrdalr fsravmkfgn esqvtliaee vggavaaapl daqielfnal
     1321 vegcreavel gniepkgpll dffgvpvkan dlinrvqelq llakrisrye dpikqfrvlm
     1381 ylkpsnwskg cgwnqiddar lllgiyyhgf gnwekirlde rlgltkkiap aelqhhetfl
     1441 prapnlkera nallemelaa vggknagvka grkpskkekq nplnvsishv rdkkgkpgst
     1501 kvsfkmgrdk terpqkvepl vkeegemsdn eevyeqfkev kwmewcedvm ideiktlrrl
     1561 qrlqttsadl pkdkvlskir nylqllgrri dqivlehede lyrqdrmtmr lwnyvstfsn
     1621 lsgerlhqiy sklkqeqddd ggvgpshmng stpghvdrdg dpnffppfsr stdkqrgykk
     1681 natahqtsqp ihkgidtakf eawkrwraet vnhpqlqppt qrplnngstr vvdpnslgil
     1741 gagpsdkrlv nterpfrmrq tgfpqrqgfp sgik
//
LOCUS       XP_016728269             336 aa            linear   PLN 06-AUG-2024
DEFINITION  phytochromobilin:ferredoxin oxidoreductase, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016728269
VERSION     XP_016728269.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872780.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..336
                     /product="phytochromobilin:ferredoxin oxidoreductase,
                     chloroplastic"
                     /calculated_mol_wt=38764
     Region          60..282
                     /region_name="Fe_bilin_red"
                     /note="Ferredoxin-dependent bilin reductase; pfam05996"
                     /db_xref="CDD:399177"
     CDS             1..336
                     /gene="LOC107939449"
                     /coded_by="XM_016872780.2:584..1594"
                     /db_xref="GeneID:107939449"
ORIGIN      
        1 mdccsfsssl slslslmlkp rpplmtinyn gnsqwskrkk kmhcllqvsa isyqnfihfa
       61 lnetkrhtll lpsplqekyg smiamdeqtr lemlsfetpk irllrsmsie geamqvldfa
      121 afpkpefdlp ifcgnfftta nmnivvldln plhdvtsrrd ykekyydhll plglkytell
      181 pwggkltses ikffspiviw tkfsssnskh evlysafmey ykawlelmeq avedtdpsqi
      241 tcnleaqhry ltwraekdpg hgvlkrlige klakdllrnf lfsgidelgs ktfldyfpey
      301 siedgtinek rsiigkgfen rpwdkngefi gndlrn
//
LOCUS       XP_016728266             478 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016728266
VERSION     XP_016728266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..478
                     /product="scarecrow-like protein 3"
                     /calculated_mol_wt=53277
     Region          50..473
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..478
                     /gene="LOC107939446"
                     /coded_by="XM_016872777.2:706..2142"
                     /db_xref="GeneID:107939446"
ORIGIN      
        1 mvsmsqness slkssssslq vfsmmslspr lgssypwlke lkseerglyl ihllltcanh
       61 vatgslenan ialeqisela spdgdtmqri aayfsealad rilktwpglh kainstrvvd
      121 lvseqalvrr lffevfpflk aafllvnqai ieamegekvv hvidldaaep mqwialirgl
      181 sarpegpphl ritgihvrke vldqmghrls eeaekldipf qfnpvvgdle dldverlhvk
      241 tgeavaissv lrlhsllayd deplrkklpl alknsngihl qralqmsqnt lgellekdtv
      301 ngcspspdsa swsplsspvs pkvdtfltal rgllpklvvi teqdsnhngs tlmerllesl
      361 hsyaalfdcl estvsrasse rlklekmlfg neikniisce gaerkerhek lekwiqrlds
      421 agfcnvplsy ygmlqaktll qgyncdgykm kdengcvmvc wqdrpmfsvs awrcrnsl
//
LOCUS       XP_016728276             317 aa            linear   PLN 06-AUG-2024
DEFINITION  BURP domain protein RD22 [Gossypium hirsutum].
ACCESSION   XP_016728276
VERSION     XP_016728276.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728276.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..317
                     /product="BURP domain protein RD22"
                     /calculated_mol_wt=34822
     Region          107..316
                     /region_name="BURP"
                     /note="BURP domain; pfam03181"
                     /db_xref="CDD:460837"
     CDS             1..317
                     /gene="LOC107939457"
                     /coded_by="XM_016872787.2:43..996"
                     /db_xref="GeneID:107939457"
ORIGIN      
        1 mafrfivila llnfafggsk atltkeelhw isvfphtkmp kslqavlpip gesisfkgda
       61 dpdnkgvndp efgaysygdd senipvnrka lggksindyt atketiyffe dallpgtkvy
      121 lqrllqesdt kkflprqiae stpltndels eilkkfslkp eskgatyvkn tvkncerpem
      181 rgetkycaas letfvdsgvs ilgkniklls neigdetknp sfkigngvrt vggnevvchk
      241 mtyphavylc hsivgtevyk vplvsddgtk akamavchkd tsawspnhia fkilkvkpgt
      301 vpichflgrd tlvwvsn
//
LOCUS       XP_016728268             166 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial fission 1 protein A [Gossypium hirsutum].
ACCESSION   XP_016728268
VERSION     XP_016728268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..166
                     /product="mitochondrial fission 1 protein A"
                     /calculated_mol_wt=18067
     Region          23..140
                     /region_name="Fis1"
                     /note="Mitochondrial Fission Protein Fis1, cytosolic
                     domain; cd12212"
                     /db_xref="CDD:276936"
     Site            order(28,31..32,35,49..51,53..54,57,66,69..70,72..73,76,
                     79..80,84,87..90,92,94,102,104,107,110..111,114)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:276936"
     Region          49..81
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     Region          87..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     CDS             1..166
                     /gene="LOC107939447"
                     /coded_by="XM_016872779.2:97..597"
                     /db_xref="GeneID:107939447"
ORIGIN      
        1 meakvgkffd svtnffsgsd qlpwcdadii agcereaaga dngsdeskne cltrfswalv
       61 hsrrtedver giamleasia sttdplkmre klyllavghf rrgdysrsre lveqclmiep
      121 ewrqaqslkk aiedritkdg vigigiavsa agliaggiaa alsrkk
//
LOCUS       XP_016728272            1586 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 [Gossypium hirsutum].
ACCESSION   XP_016728272
VERSION     XP_016728272.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872783.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1586
                     /product="disease resistance protein At4g27190"
                     /calculated_mol_wt=180837
     Region          1..>285
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          153..372
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <486..805
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          491..512
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          513..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..583
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          584..606
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..631
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1586
                     /gene="LOC107939452"
                     /coded_by="XM_016872783.2:170..4930"
                     /db_xref="GeneID:107939452"
ORIGIN      
        1 mdeaniawtl vrglikpikr etsfiilykr kaanrdskvr qlksrwaqvq sdvtlatrng
       61 qeiiqvvkdw qdearpiaee pekalgeepk cffgwcpdlk yrydvskkae edglfidkll
      121 deasgfkdkv shpfdpqvrw atpsecymaf esreavvnqv lvalkdatlk vigvygvsgi
      181 gkttlitqva kmvkankvfd wvalssvtqt pnvetiqaei adclglkfeq esvpgratkl
      241 shrlskeknv lvilddirts lklndvgivf gdhqhrgcki llssrdpnvf semnvdksfe
      301 vdvlkeeeaw nlfdtmvghr vkdpserska hdvcrgcrgs plsivttana lkkkdfsewe
      361 saskqltthp ssavelsfnh landelksaf qlcslmpykp tifdmlkygt afglfqgitt
      421 vegaiqrlhr lvqnlksscl lfdgrmaeef amhevireva asiasrdgkr flmrneigqr
      481 elpnagrlrn ctaislfynd fvrlpdllec pqlkvfqlyd nnpelrisdq ffskmealev
      541 ldvkgmkhls slpsslsslg dlqtlclesc vlqhmamvek mkkleilsfn nsnieelpke
      601 igeltqlkvl nldncsklra ippnvisnls rleelhigns faqwedeqtt qrhaslseln
      661 hlpdltslnl hipdyrnmpk rfffkklqrf kiligntwdw sdkheatril klklnesihm
      721 ndgvqilvkr tevlyldelk yvedllydld esttgfpqlk ylhiqnglgl khivnltdkv
      781 tldvfpvles lylhnlinle kicnaqlemq pfaklrvinv gscgqlknlf sfsiarglkq
      841 lqevevvdck nmveiitggr grdvgdnett ttiefeqlqs ltlqqlpkli sfnassttat
      901 lfnnkvtfpk lknlklssis tlqiwqeqll svpnciqslt sitvedcgnl kfllsssmva
      961 sleqlihlei secklveaii eetkmegrme kilfpnlhsl kikglpqltr fcsgkavqfp
     1021 slkqlqiehc pklgtfisnf vknetrplfd enaafpslek mlishlrslk mlwndqlpkn
     1081 sfselktmev eyclqlqtif pfnmvekfqr lqtlvindcv sleevfdfqr lnikenktev
     1141 aiplkklylf nlpqlkhvws kdpqerisfk nltsvyvfgs eslkslfpas varglqelks
     1201 leidtcgveq ivamdvtpqp etrfvfpkia flqlwrlekl rsfypgvhst ewpmlkrilt
     1261 yhygdmkmft sellgtrqtr tvsqplflve kvvqnldelt ldsrdismls denvfrpdlf
     1321 ssikvlqvhc yhqesailpf gfiqnftnld nlyvgcckfr elfpserlvg dprkplgtls
     1381 girtlklvll snlrhiwkpn srpdlipsyl eslvvwncnr lislappsss fsnlttldiw
     1441 kchgvkhiis sstaktltkl tkmsvrecne vteivanded etltdivfsk lvclelnklp
     1501 nvlyfdsgsy alkfpslevv tlsqcpslie fhtgnelstp klnkvwqtee mdqscwkgdl
     1561 natvskkmvl gprrrdhdyr rkidlm
//
LOCUS       XP_016728275             200 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein Y14 [Gossypium hirsutum].
ACCESSION   XP_016728275
VERSION     XP_016728275.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872786.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728275.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..200
                     /product="RNA-binding protein Y14"
                     /calculated_mol_wt=21723
     Region          88..175
                     /region_name="RRM_RBM8"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein RBM8A, RBM8B nd similar proteins; cd12324"
                     /db_xref="CDD:409762"
     Site            order(88..92,97,99,121..122,124,126,128..130,135,137,139,
                     141,168..172,174..175)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409762"
     CDS             1..200
                     /gene="LOC107939456"
                     /coded_by="XM_016872786.2:171..773"
                     /db_xref="GeneID:107939456"
ORIGIN      
        1 masadveavd fepedddlmd edaaagdasp qvsmpklksa itggasvsls gpkktkgrgf
       61 rqddadrhsh lasrdfdslg sdggpgpqrs iegwiilvtg vheeaqeddl hntfgefgei
      121 knlhlnldrr tgfvkgyali eyekfeeakn aisamdgael ltqtmnvdwa fsngpsvgas
      181 krknmragrt hrsrsprrry
//
LOCUS       XP_016728273             527 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 17 [Gossypium hirsutum].
ACCESSION   XP_016728273
VERSION     XP_016728273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872784.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..527
                     /product="calcium-dependent protein kinase 17"
                     /calculated_mol_wt=58630
     Region          73..330
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(79..83,87,100,102,135,151..154,158,160,196..197,199,
                     201..202,204,217..218,221,235..239,241)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(79..82,87,100,102,135,151..154,158,201..202,204,
                     217..218)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(83,158,160,196..197,199,201,221,235..239,241)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(217..225,235..239)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          371..510
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..527
                     /gene="LOC107939453"
                     /coded_by="XM_016872784.2:179..1762"
                     /db_xref="GeneID:107939453"
ORIGIN      
        1 mgncctrgdg sdklekaaag ygnsdadptv tsqqtsyrta pssqgastvg kqskpapmgp
       61 vlgrpmedvk atytigkelg cgqfgithlc thkttgeqfa cktiakrkls skedvedvrr
      121 evqimhhltg qpnivelkga yedkhavhlv melcgggelf driiakghyt eraaasllrt
      181 imqivhtfhs mgvihrdlkp enflllgkee nsplkvtdfg lsvffkpdei fkdivgsayy
      241 iapevlkrky gpeadiwsvg vmlyillsgv ppfwaeseng ifnaiikshv dfsgkpwpsi
      301 shqakdlvkr mlnpdpkrrl taaqvlshpw ikedgeapdt pldnavlsrl kqfkamnqfk
      361 kvalkviagc lseeeirglk emfkamdtdn sgtitleelr qglakqgtkl seyevkqlme
      421 aadadgngti dydefitatm hmnrmdreeh lyhafqhfdk dnsgyittee leqalreygi
      481 ndstdikeil sevdadndgr inydefvamm kkgnpepnpk krrdvvv
//
LOCUS       XP_016728264             445 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLT1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016728264
VERSION     XP_016728264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872775.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..445
                     /product="protein CLT1, chloroplastic"
                     /calculated_mol_wt=47447
     Region          116..429
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..445
                     /gene="LOC107939443"
                     /coded_by="XM_016872775.2:183..1520"
                     /db_xref="GeneID:107939443"
ORIGIN      
        1 mtsyyrrltv gptvlnipvq pptksklpvf pprrpynnii qssfgialrs rkcwrveatv
       61 rsagrseggd gtkkagpgqg pgpcsysved rtvevdskrd rtvavavava vtvvlgvgnr
      121 vlyklalvpl khypfflaql atfgyvlvyf svmylryhag ivtdemlsmp kapylvigll
      181 ealaaatgma agailsgasi pilsqtflvw qillstiflg rryrvnqllg cflvtvgvvi
      241 tvasgsssgh slkeagifws lmmivsfllq aadtvlkevi fldaekrlkg gsvdlfvvns
      301 ygsafqalfi clllpflskl wgipfsqlpn ylkdgaacfl nmggtlstgc dgapllpllf
      361 iivnmgfnia llhllkissa vvsslastfs vpisvyiftl plpylgvass lpagfvagai
      421 ilvmglliya wspsdsssai pspss
//
LOCUS       XP_016728298             124 aa            linear   PLN 06-AUG-2024
DEFINITION  splicing factor 3B subunit 6-like protein [Gossypium hirsutum].
ACCESSION   XP_016728298
VERSION     XP_016728298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872809.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="splicing factor 3B subunit 6-like protein"
                     /calculated_mol_wt=14268
     Region          17..93
                     /region_name="RRM_SF3B14"
                     /note="RNA recognition motif (RRM) found in pre-mRNA
                     branch site protein p14 (SF3B14) and similar proteins;
                     cd12241"
                     /db_xref="CDD:409687"
     Site            order(17,19..20,22,32,46..53,56,59,61,65..67,92)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409687"
     Site            order(22,61,91..93)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409687"
     CDS             1..124
                     /gene="LOC107939473"
                     /coded_by="XM_016872809.2:267..641"
                     /db_xref="GeneID:107939473"
ORIGIN      
        1 matislrkan trlppevnrv lyvrnlpfni sseemydifg kygairqiri gtsketrgta
       61 fvvyediyda ktavdhlsgf nvanrylivl yyqqakmskk fdqkkkeeei akmqekygvs
      121 tkdk
//
LOCUS       XP_040941801             254 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g62350 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941801
VERSION     XP_040941801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085867.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..254
                     /product="pentatricopeptide repeat-containing protein
                     At1g62350 isoform X1"
                     /calculated_mol_wt=29811
     Region          100..124
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          131..160
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          166..195
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..254
                     /gene="LOC107939445"
                     /coded_by="XM_041085867.1:311..1075"
                     /db_xref="GeneID:107939445"
ORIGIN      
        1 mqrltrsvia karassirll lhdtsietqr lalvrfyvsg saaavssssp slsiwrrkke
       61 mtkegliaak elkrlqsnpv rlhrfilshv srllksdivs vlaefqrqnq vflsmklydv
      121 vrkeiwyrpd mffyrdmlmm larnrkvdes rrvwedlkke qvlfdqhtfg dlvrvyldsg
      181 lpseamniyd emrrspdppl slpfrvilkg lipypelrkk vkddflelfp dmivydpped
      241 lfedresrse neve
//
LOCUS       XP_040941802             248 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g62350 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941802
VERSION     XP_040941802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085868.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="pentatricopeptide repeat-containing protein
                     At1g62350 isoform X2"
                     /calculated_mol_wt=29105
     Region          128..154
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          160..189
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..248
                     /gene="LOC107939445"
                     /coded_by="XM_041085868.1:185..931"
                     /db_xref="GeneID:107939445"
ORIGIN      
        1 mqrltrsvia karassirll lhdtsietqr lalvrfyvsg saaavssssp slsiwrrkke
       61 mtkegliaak elkrlqsnpv rlhrfilshv srllksdivs vlaefqrqnq lydvvrkeiw
      121 yrpdmffyrd mlmmlarnrk vdesrrvwed lkkeqvlfdq htfgdlvrvy ldsglpseam
      181 niydemrrsp dpplslpfrv ilkglipype lrkkvkddfl elfpdmivyd ppedlfedre
      241 srseneve
//
LOCUS       XP_016728287             877 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein 7 [Gossypium hirsutum].
ACCESSION   XP_016728287
VERSION     XP_016728287.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872798.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..877
                     /product="rho GTPase-activating protein 7"
                     /calculated_mol_wt=97180
     Region          19..125
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          181..318
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          558..>746
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          617..696
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..877
                     /gene="LOC107939464"
                     /coded_by="XM_016872798.2:282..2915"
                     /db_xref="GeneID:107939464"
ORIGIN      
        1 msaslaafer prggasntvf ksgplfissk gigwkswkkr wfiltrtslv ffkndpsalp
       61 qrggevnltl ggidlnnsgs vvvredkkll tvlfpdgrdg raftlkaets edlyewktal
      121 ehalaqapsa alvmghngif rndtadaieg sfhqwrdkrt akslvvgrpi llaledidgs
      181 psflekalqf lekfgtkveg ilrqsadvee vdrrvqeydq gktefdsded ahvvgdcvkh
      241 vlrelpsspv pascctalle aykidrkear inamrsaile tfpepnrrll qrilkmmhai
      301 sshshvnrmt psavaacmap lllrpllage celeddfdvn gdnsaqllaa anaannaqai
      361 ittlleeyen ifddeslqrc sisadfrien sasedstdee npdmkdngyh daeneadpdt
      421 dndpervlsg klsessgyag sdlydykafe ddgsdvestr dnqaqaents lvvdpprmrd
      481 pdaqleeqak qnkgnenqin etdvssvlpt gesyrsmgei lssmdpghpi sspglesste
      541 kpvgkakgss lnakrstfwg rsnarktpsm esvdssgeee laiqrleitk ndlqhriake
      601 argnailqas lerrkqalhe rrlaleqdvs rlqeqlqaer dlraalevgl smssgqfsss
      661 hgmdsktrae leeialaead varlkqkvae lhhqlnqqrq hhygslsdac dryqhvqnhn
      721 sqqrflqqdf dttlaycnhe rkqrteesll gpdwrnvkgq glaignstrq ptrkqfvdsp
      781 nlsdskiiea spnmsinelc avgsasipst sraaevidyt rhssaassal velttrldff
      841 kerrsqlmeq lhnldlnyss tsaqdfvykp pssppwn
//
LOCUS       XP_016728278             988 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SMG7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016728278
VERSION     XP_016728278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..988
                     /product="protein SMG7 isoform X1"
                     /calculated_mol_wt=109674
     Region          69..194
                     /region_name="EST1"
                     /note="Telomerase activating protein Est1; pfam10374"
                     /db_xref="CDD:463062"
     Region          206..542
                     /region_name="EST1_DNA_bind"
                     /note="Est1 DNA/RNA binding domain; pfam10373"
                     /db_xref="CDD:431239"
     CDS             1..988
                     /gene="LOC107939458"
                     /coded_by="XM_016872789.2:281..3247"
                     /db_xref="GeneID:107939458"
ORIGIN      
        1 mmivqidkms apssteraqr lyeknielek nrrrsaqarv psdpnawqqm renyeaiile
       61 dhafseqhni eyalwqlhyk rieelrahys aavssagsnt sqgvkvpprp drltkirlqf
      121 ktflseatgf yhdlilkira kyglpfgyfs ddsesqivmd kdgkkstdik kglvschrcl
      181 iylgdlaryk glygdgdsks reyaaassyy lqaasilsss gnphhqlail asytgdelga
      241 vyryfrslav dnpfstardn livafeknrh nysqlpgdvk aplvkepavr lsgkdrgkae
      301 aklaskeinm esnaarekvs gvqdafksfc irfvrlngil ftrtsletfa dvlslvshdl
      361 cellssgpee elnfgthaae nalllvrmvs ilvftvynlk resdgqtyae ivqrtallqn
      421 afvavfelmr hvvercsqlr dvsssytlpa ilvflewlac cpdvavagsd vdekqsmtrs
      481 lfwkhcisfl nkilsirtmg igddedetcf fnmsryeget enclalsedf elrgflplvp
      541 ahtildfsrk rsfisegdke kkarvkrila agkalanvir vdqknvcfds kakkfligae
      601 psedvtfsss tslatngvgh etpseksvni gnvqpilqpr mveeedddde vivfqpamse
      661 krtevvgpnw ppsealkhdr ssapgdvkfy gstmsgppas lhqhntfdvs splpvsfgsi
      721 gpklqqpvrm qssgwsveea tslanslkgl tmlenghltk lglqdnasls hptarsvgfq
      781 klpisasagd myysqmkvpd tvlpsridai vssgvtpdal aaktssalqv gmrknpvsrp
      841 vrhlgpppgf shvpskpqse svsashlenp lmddyswldg yqltpslkss gldsslnhas
      901 hvdpsyvnns snglngmvsf pfpgkqgpta qfqmekqkgw qdyhtlehlk nrhelklqqq
      961 qlmngnqqft aqpeqyqgqs vwtgryfv
//
LOCUS       XP_016728280             980 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SMG7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016728280
VERSION     XP_016728280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872791.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..980
                     /product="protein SMG7 isoform X2"
                     /calculated_mol_wt=108715
     Region          61..186
                     /region_name="EST1"
                     /note="Telomerase activating protein Est1; pfam10374"
                     /db_xref="CDD:463062"
     Region          198..534
                     /region_name="EST1_DNA_bind"
                     /note="Est1 DNA/RNA binding domain; pfam10373"
                     /db_xref="CDD:431239"
     CDS             1..980
                     /gene="LOC107939458"
                     /coded_by="XM_016872791.2:206..3148"
                     /db_xref="GeneID:107939458"
ORIGIN      
        1 msapsstera qrlyekniel eknrrrsaqa rvpsdpnawq qmrenyeaii ledhafseqh
       61 nieyalwqlh ykrieelrah ysaavssags ntsqgvkvpp rpdrltkirl qfktflseat
      121 gfyhdlilki rakyglpfgy fsddsesqiv mdkdgkkstd ikkglvschr cliylgdlar
      181 ykglygdgds ksreyaaass yylqaasils ssgnphhqla ilasytgdel gavyryfrsl
      241 avdnpfstar dnlivafekn rhnysqlpgd vkaplvkepa vrlsgkdrgk aeaklaskei
      301 nmesnaarek vsgvqdafks fcirfvrlng ilftrtslet fadvlslvsh dlcellssgp
      361 eeelnfgtha aenalllvrm vsilvftvyn lkresdgqty aeivqrtall qnafvavfel
      421 mrhvvercsq lrdvsssytl pailvflewl accpdvavag sdvdekqsmt rslfwkhcis
      481 flnkilsirt mgigddedet cffnmsryeg etenclalse dfelrgflpl vpahtildfs
      541 rkrsfisegd kekkarvkri laagkalanv irvdqknvcf dskakkflig aepsedvtfs
      601 sstslatngv ghetpseksv nignvqpilq prmveeeddd devivfqpam sekrtevvgp
      661 nwppsealkh drssapgdvk fygstmsgpp aslhqhntfd vssplpvsfg sigpklqqpv
      721 rmqssgwsve eatslanslk gltmlenghl tklglqdnas lshptarsvg fqklpisasa
      781 gdmyysqmkv pdtvlpsrid aivssgvtpd alaaktssal qvgmrknpvs rpvrhlgppp
      841 gfshvpskpq sesvsashle nplmddyswl dgyqltpslk ssgldsslnh ashvdpsyvn
      901 nssnglngmv sfpfpgkqgp taqfqmekqk gwqdyhtleh lknrhelklq qqqlmngnqq
      961 ftaqpeqyqg qsvwtgryfv
//
LOCUS       XP_016728282             317 aa            linear   PLN 06-AUG-2024
DEFINITION  epoxide hydrolase A [Gossypium hirsutum].
ACCESSION   XP_016728282
VERSION     XP_016728282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872793.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..317
                     /product="epoxide hydrolase A"
                     /calculated_mol_wt=36851
     Region          6..315
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..317
                     /gene="LOC107939459"
                     /coded_by="XM_016872793.2:150..1103"
                     /db_xref="GeneID:107939459"
ORIGIN      
        1 megvqhrmve vnginihiae kgegpvilfl hgfpelwysw rhqilalsnm gfrtvapdlr
       61 gygdsdipes vdsytcfhmv gdlvelidvl dpregkvfvv ghdwgailaw flclfrpdkv
      121 kalvnlsvpf lrfdrnikpi elwrayygsd hymsrfqeyg eiegefawvg mdrvekeflt
      181 dfpvllpkgk lfkrpldepi tlpswlseee anyyvtkfqk tgftgplnfy rnfdrnwell
      241 kpwvgckitt pakfmmgdkd lvyhmpgmkd yihnggfqed vpslkevvvl egvdhfisme
      301 kpdevnqyif dffsrfh
//
LOCUS       XP_040941803             260 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941803
VERSION     XP_040941803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085869.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..260
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29943
     Region          45..105
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(45,48,63,65,82,85,98,101)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438236"
     CDS             1..260
                     /gene="LOC107939468"
                     /coded_by="XM_041085869.1:236..1018"
                     /db_xref="GeneID:107939468"
ORIGIN      
        1 mtsaveinge qlvnalpdls iqdqievkkk gavveegcen hsgicaicld kimlqetalv
       61 kgcehaywhk stlhrliepd lcvtcilrwa tysqmptcpq ckhpfefldv hrsldgrihd
      121 ymfeesvcll lratwfkpli vleereevyd nlesyydyyp yededdeede vyytnspslr
      181 ignrrwgdsg yvrsgrqear pvqrsnfqds tgagssrepk nkettkstmg rrakrtlkre
      241 aankaaeekh qehlmssrlk
//
LOCUS       XP_040941804             246 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941804
VERSION     XP_040941804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085870.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..246
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=28216
     Region          45..91
                     /region_name="RING-HC_Topors"
                     /note="RING finger, HC subclass, found in topoisomerase
                     I-binding arginine/serine-rich protein (Topors) and
                     similar proteins; cd16574"
                     /db_xref="CDD:438236"
     CDS             1..246
                     /gene="LOC107939468"
                     /coded_by="XM_041085870.1:258..998"
                     /db_xref="GeneID:107939468"
ORIGIN      
        1 mtsaveinge qlvnalpdls iqdqievkkk gavveegcen hsgicaicld kimlqetalv
       61 kgcehaycvt cilrwatysq mptcpqckhp fefldvhrsl dgrihdymfe esvclllrat
      121 wfkplivlee reevydnles yydyypyede ddeedevyyt nspslrignr rwgdsgyvrs
      181 grqearpvqr snfqdstgag ssrepknket tkstmgrrak rtlkreaank aaeekhqehl
      241 mssrlk
//
LOCUS       XP_016728297             341 aa            linear   PLN 06-AUG-2024
DEFINITION  signal peptide peptidase [Gossypium hirsutum].
ACCESSION   XP_016728297
VERSION     XP_016728297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872808.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..341
                     /product="signal peptide peptidase"
                     /calculated_mol_wt=37824
     Region          47..323
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; cl01342"
                     /db_xref="CDD:470165"
     CDS             1..341
                     /gene="LOC107939471"
                     /coded_by="XM_016872808.2:237..1262"
                     /db_xref="GeneID:107939471"
ORIGIN      
        1 mkncerlanl alaglalapl vvkvdpnlnv iltaclavyv gcyrsvkptp psetmskeha
       61 mrfpfivsam llslfllfkf lskdlvnavl tcyffvlgtv allatilpam krflpklwne
      121 dliiwrfpyf rsleieftrs qviaaipgsf fcawyasqkh wlannilgla fciqgiemls
      181 lgsfkigail ltglfvydif wvfftpvmvs vaksfdapik llfpttdsar pfsmlglgdi
      241 vipgifvala lrfdasrgkg sqyfksafsg yivglvltii vmnwfqaaqp allyivpavm
      301 gflalhciwn gevkpllefd esntevksqe gstdeyskkv e
//
LOCUS       XP_016728288             652 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728288
VERSION     XP_016728288.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872799.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..652
                     /product="uncharacterized protein"
                     /calculated_mol_wt=69917
     Region          164..199
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     CDS             1..652
                     /gene="LOC107939465"
                     /coded_by="XM_016872799.2:217..2175"
                     /db_xref="GeneID:107939465"
ORIGIN      
        1 mspasksksk dkkaskepqk asskpsgsan agsgvpasay npvlgtfhti etvpsfsasa
       61 lqsngrfrni detdehlggs pragvgydsv snngswsges edhkdkttnp pvrqeiipga
      121 dndkrekirq knerkhqrqk erraqelher cngylmsrkl ealaqqlvam gfshdratma
      181 lilndgkvee svawlfdgge eavkhkestv gggilkidis eelaqiadme irykctkqev
      241 eravvaadgd lekaaeslrt lkldpptpsk peetcnplts stskvavtsg qnlsarpqpk
      301 qnpstvrqli rdekdlnftk aavtmgvsse svsksfqhmk riqpkmewak pqlsevpaek
      361 rwlssgsnps asyslasplq aspppskves rhvavasdfk nlvpsirepv immqrsqsvn
      421 tkqvpttsis tsppgtsfmy patrventks ngfiphipss rsfssnhlss sqmhhqiyhp
      481 qqqhftsssg pgdspgtsrg nglwsrsgas pmlaaasslg lftglgstts sgasspvdws
      541 sgssmgqldy tnidwslnrg lssspspggi wlgsstspmk sihmyypntn glsakpamrl
      601 tpngkgvqiv glpdggvapa etstagsqew tspfegkdlf slprqyvssp si
//
LOCUS       XP_040941805             500 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941805
VERSION     XP_040941805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085871.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..500
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=56275
     Region          21..76
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..500
                     /gene="LOC107939467"
                     /coded_by="XM_041085871.1:340..1842"
                     /db_xref="GeneID:107939467"
ORIGIN      
        1 medsgeqqte enkgsvdvan kkrtfktpaq llaleeayka qkfpsdemka rlavqirlte
       61 kqisswfchr rlkdkrrdes ypngrqdhss gviqdrgsgl rqdscgsikq gdyrnidlre
      121 vesrriygqe fpaadlkfec rshqnpyddr medtssesnl slndqpenga itqinprssk
      181 sigykpsgyl kvkgeienpa itavkrqlgr hykedgpllg iqfdslppga fefpssspvn
      241 epmyvgdtrq thspdisgvi kqpsnivnvh nskissqdsd megakfntvq gserldrksh
      301 hqlkhkssld iyndstkkst ltdskrikts skfavekmgs dsfpnhpspy gmkisdeqqk
      361 pwlhdddsht ykalknenls rtsnlirgyn essstergss armgkveklr gewktkkecp
      421 vtvktdlknk lrvskqvnvq ypqqdfaaya pharlplltn qtkggnsnyc ggaflqfsrl
      481 flvgtssnyw nnicgcvpfe
//
LOCUS       XP_016728291             486 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728291
VERSION     XP_016728291.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872802.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=54619
     Region          21..76
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..486
                     /gene="LOC107939467"
                     /coded_by="XM_016872802.2:338..1798"
                     /db_xref="GeneID:107939467"
ORIGIN      
        1 medsgeqqte enkgsvdvan kkrtfktpaq llaleeayka qkfpsdemka rlavqirlte
       61 kqisswfchr rlkdkrrdes ypngrqdhss gviqdrgsgl rqdscgsikq gdyrnidlre
      121 vesrriygqe fpaadlkfec rshqnpyddr medtssesnl slndqpenga itqinprssk
      181 sigykpsgyl kvkgeienpa itavkrqlgr hykedgpllg iqfdslppga fefpssspvn
      241 epmyvgdtrq thspdisgvi kqpsnivnvh nskissqdsd megakfntvq gserldrksh
      301 hqlkhkssld iyndstkkst ltdskrikts skfavekmgs dsfpnhpspy gmkisdeqqk
      361 pwlhdddsht ykalknenls rtsnlirgyn essstergss armgkveklr gewktkkecp
      421 vtvktdlknk lrvskqvnvq ypqqdfaaya pharlplltn qtkgssmdvp ssfsedetae
      481 tdsssd
//
LOCUS       XP_016728292             486 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728292
VERSION     XP_016728292.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872803.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..486
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=54619
     Region          21..76
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..486
                     /gene="LOC107939467"
                     /coded_by="XM_016872803.2:338..1798"
                     /db_xref="GeneID:107939467"
ORIGIN      
        1 medsgeqqte enkgsvdvan kkrtfktpaq llaleeayka qkfpsdemka rlavqirlte
       61 kqisswfchr rlkdkrrdes ypngrqdhss gviqdrgsgl rqdscgsikq gdyrnidlre
      121 vesrriygqe fpaadlkfec rshqnpyddr medtssesnl slndqpenga itqinprssk
      181 sigykpsgyl kvkgeienpa itavkrqlgr hykedgpllg iqfdslppga fefpssspvn
      241 epmyvgdtrq thspdisgvi kqpsnivnvh nskissqdsd megakfntvq gserldrksh
      301 hqlkhkssld iyndstkkst ltdskrikts skfavekmgs dsfpnhpspy gmkisdeqqk
      361 pwlhdddsht ykalknenls rtsnlirgyn essstergss armgkveklr gewktkkecp
      421 vtvktdlknk lrvskqvnvq ypqqdfaaya pharlplltn qtkgssmdvp ssfsedetae
      481 tdsssd
//
LOCUS       XP_040941806             460 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine desulfurase 1, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941806
VERSION     XP_040941806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085872.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..460
                     /product="cysteine desulfurase 1, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=50069
     Region          37..460
                     /region_name="PLN02855"
                     /note="Bifunctional selenocysteine lyase/cysteine
                     desulfurase"
                     /db_xref="CDD:215460"
     Site            order(140..141,144,169,246,248..249,269,271..272)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99746"
     Site            272
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99746"
     CDS             1..460
                     /gene="LOC107939470"
                     /coded_by="XM_041085872.1:59..1441"
                     /db_xref="GeneID:107939470"
ORIGIN      
        1 meglvvklps fpflspniss ssssstfrlg frrlsasisa avkegsvslg qltrpdfpil
       61 hqqevngskl vyldnaatsq kptavlkslq nyyeaynsnv hrgihylsak atdeyelark
      121 kvaafinasd saeivftrna teainlvays wglsnlkprd eiiltiaehh saivpwqiva
      181 qktgailkfv sldenevpdv eklremists tklvvvhhvs nvlgsvlpie diviwahavg
      241 akvlvdacqs vphmvvdvqg ldadflvass hkmcgptgig flfgksnlll tmppflggge
      301 misdvfldhs tyaeppsrfe agtpaigeai glgaaidyls gigmqkihdy emelanylye
      361 klcsvaniri ygpkpsddvh raalcsfnie nihptdiatf ldqqhgvair sghhcaqplh
      421 hhlgvnasar aslhfyntee dvdnfiqsln dtvsffnsfk
//
LOCUS       XP_016728296             459 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine desulfurase 1, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016728296
VERSION     XP_016728296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872807.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..459
                     /product="cysteine desulfurase 1, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=49941
     Region          37..459
                     /region_name="PLN02855"
                     /note="Bifunctional selenocysteine lyase/cysteine
                     desulfurase"
                     /db_xref="CDD:215460"
     Site            order(139..140,143,168,245,247..248,268,270..271)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99746"
     Site            271
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99746"
     CDS             1..459
                     /gene="LOC107939470"
                     /coded_by="XM_016872807.2:89..1468"
                     /db_xref="GeneID:107939470"
ORIGIN      
        1 meglvvklps fpflspniss ssssstfrlg frrlsasisa avkegsvslg qltrpdfpil
       61 hqevngsklv yldnaatsqk ptavlkslqn yyeaynsnvh rgihylsaka tdeyelarkk
      121 vaafinasds aeivftrnat eainlvaysw glsnlkprde iiltiaehhs aivpwqivaq
      181 ktgailkfvs ldenevpdve klremistst klvvvhhvsn vlgsvlpied iviwahavga
      241 kvlvdacqsv phmvvdvqgl dadflvassh kmcgptgigf lfgksnlllt mppflgggem
      301 isdvfldhst yaeppsrfea gtpaigeaig lgaaidylsg igmqkihdye melanylyek
      361 lcsvaniriy gpkpsddvhr aalcsfnien ihptdiatfl dqqhgvairs ghhcaqplhh
      421 hlgvnasara slhfynteed vdnfiqslnd tvsffnsfk
//
LOCUS       XP_040941807             325 aa            linear   PLN 06-AUG-2024
DEFINITION  epoxide hydrolase A [Gossypium hirsutum].
ACCESSION   XP_040941807
VERSION     XP_040941807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085873.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..325
                     /product="epoxide hydrolase A"
                     /calculated_mol_wt=36957
     Region          9..323
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..325
                     /gene="LOC121212663"
                     /coded_by="XM_041085873.1:98..1075"
                     /db_xref="GeneID:121212663"
ORIGIN      
        1 mksmegiqhk tvsvnginmh iaekgegpli lfihgfpelw ytwrhqingl aalgyralap
       61 dlrgyggtda pdcvadytcf havgdliall dmeappeked kvfvvghdwg aiiawflclf
      121 rpdrvkalft lsapfitcdp rfkpvetlev llgkdyyivr fqepgemeae faeislrrav
      181 lellsyripd plylrkgnlf ghpldcpvnl ppwlsdqdad yyanqfqetg itgalnyyrn
      241 idtdwellap wwksqiqvpv kfamgdhdlv ytmpgvkdyi lngglkrnvp fleealving
      301 vshwineeip dqinqllfdf fskfn
//
LOCUS       XP_040941808             317 aa            linear   PLN 06-AUG-2024
DEFINITION  epoxide hydrolase A [Gossypium hirsutum].
ACCESSION   XP_040941808
VERSION     XP_040941808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085874.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..317
                     /product="epoxide hydrolase A"
                     /calculated_mol_wt=36392
     Region          5..313
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..317
                     /gene="LOC107890052"
                     /coded_by="XM_041085874.1:188..1141"
                     /db_xref="GeneID:107890052"
ORIGIN      
        1 megiehrmik vnginihiae kgegpvilfl hgfpelwysw rhqilalssm gyravapdlr
       61 gygdsdapds vesytcfhii gdlvelidvl dpdvgkvfvv ghdwgaymaw llclfrpdkv
      121 kalvnlsvpf rrfdreikpv dvrkanygdd yyisrfqeyg eiegefaevg vervvkeylc
      181 dfpvllpkgk lfkrpldepi tlpswlteee anyyvtvfqk tgftcpinyy rnlgrnwell
      241 gpwvgskikt pakfivgdkd lvygmpgmke yihnggfked vpsleqvvvm kcvshfinme
      301 kpeeisshiy dffcqfh
//
LOCUS       XP_040941809             175 aa            linear   PLN 06-AUG-2024
DEFINITION  AB hydrolase superfamily protein YfhM-like [Gossypium hirsutum].
ACCESSION   XP_040941809
VERSION     XP_040941809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085875.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..175
                     /product="AB hydrolase superfamily protein YfhM-like"
                     /calculated_mol_wt=19907
     Region          5..>124
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..175
                     /gene="LOC121212664"
                     /coded_by="XM_041085875.1:106..633"
                     /db_xref="GeneID:121212664"
ORIGIN      
        1 megiehrtvk vngtnihiae kgegpvilfl hgfpelwysw rhqilalssm gyravapdlr
       61 gygdsdvpds vdsytcfhii gdlvelinvv dpdegkvfvv ghdwgailgw ylcmfrpdkv
      121 kalvnlsvpf lrfhreikpv dfwisyygsd hymsrfqeyg eiegefaeig vervv
//
LOCUS       XP_016668980             496 aa            linear   PLN 06-AUG-2024
DEFINITION  stomatal closure-related actin-binding protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016668980
VERSION     XP_016668980.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..496
                     /product="stomatal closure-related actin-binding protein
                     1"
                     /calculated_mol_wt=54951
     Region          57..97
                     /region_name="SCAB-ABD"
                     /note="Actin-binding domain of plant-specific
                     actin-binding protein; pfam16711"
                     /db_xref="CDD:374744"
     Region          102..269
                     /region_name="SCAB_CC"
                     /note="Coiled-coil regions of plant-specific actin-binding
                     protein; pfam16712"
                     /db_xref="CDD:465244"
     Region          283..380
                     /region_name="SCAB-Ig"
                     /note="Ig domain of plant-specific actin-binding protein;
                     pfam16709"
                     /db_xref="CDD:465243"
     Site            order(291..293,316,325..330,332,334,336..340)
                     /site_type="other"
                     /note="PH domain interface [polypeptide binding]"
                     /db_xref="CDD:212565"
     Region          383..490
                     /region_name="SCAB-PH"
                     /note="PH domain of plant-specific actin-binding protein;
                     pfam17684"
                     /db_xref="CDD:407577"
     CDS             1..496
                     /gene="LOC107889152"
                     /coded_by="XM_016813491.2:187..1677"
                     /db_xref="GeneID:107889152"
ORIGIN      
        1 mtrmsrtfgd tmqkeavpav sanvifasts srfpsyrigs nnqiidaken pkvlsmkevv
       61 aretallleq qqrlsvrdla skfekglaaa tklseeaklr eaaslekhvl lkklrdales
      121 lkgrvagrnk ddvveaismv ealavqltqr egeliqekae vkklanflkq asqdakklvd
      181 eerafaraei enaraavqrv eealqehekm sratgkqdle elmkevqear riimlhqpsk
      241 vmdmehelra lriqlaeksk rslllqkela rskgvkdnls nlfeldgaet lgsylkikpc
      301 sdiapelskc siqwyrvsse ggkkelisga cksvyapepf dvgrslqaei iydgqliklt
      361 ttgaidpaag lgnyvealvr khdvefnviv tqmngvdqps esihvlhvgk mrmklrkgkt
      421 aiakeyyssa mqlcgvrggg naaaqalfwl akkgfsvvla feserdrnaa imlarrfafd
      481 cnimlagpdd rtslet
//
LOCUS       XP_016668981             496 aa            linear   PLN 06-AUG-2024
DEFINITION  stomatal closure-related actin-binding protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016668981
VERSION     XP_016668981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813492.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..496
                     /product="stomatal closure-related actin-binding protein
                     1"
                     /calculated_mol_wt=54951
     Region          57..97
                     /region_name="SCAB-ABD"
                     /note="Actin-binding domain of plant-specific
                     actin-binding protein; pfam16711"
                     /db_xref="CDD:374744"
     Region          102..269
                     /region_name="SCAB_CC"
                     /note="Coiled-coil regions of plant-specific actin-binding
                     protein; pfam16712"
                     /db_xref="CDD:465244"
     Region          283..380
                     /region_name="SCAB-Ig"
                     /note="Ig domain of plant-specific actin-binding protein;
                     pfam16709"
                     /db_xref="CDD:465243"
     Site            order(291..293,316,325..330,332,334,336..340)
                     /site_type="other"
                     /note="PH domain interface [polypeptide binding]"
                     /db_xref="CDD:212565"
     Region          383..490
                     /region_name="SCAB-PH"
                     /note="PH domain of plant-specific actin-binding protein;
                     pfam17684"
                     /db_xref="CDD:407577"
     CDS             1..496
                     /gene="LOC107889152"
                     /coded_by="XM_016813492.2:218..1708"
                     /db_xref="GeneID:107889152"
ORIGIN      
        1 mtrmsrtfgd tmqkeavpav sanvifasts srfpsyrigs nnqiidaken pkvlsmkevv
       61 aretallleq qqrlsvrdla skfekglaaa tklseeaklr eaaslekhvl lkklrdales
      121 lkgrvagrnk ddvveaismv ealavqltqr egeliqekae vkklanflkq asqdakklvd
      181 eerafaraei enaraavqrv eealqehekm sratgkqdle elmkevqear riimlhqpsk
      241 vmdmehelra lriqlaeksk rslllqkela rskgvkdnls nlfeldgaet lgsylkikpc
      301 sdiapelskc siqwyrvsse ggkkelisga cksvyapepf dvgrslqaei iydgqliklt
      361 ttgaidpaag lgnyvealvr khdvefnviv tqmngvdqps esihvlhvgk mrmklrkgkt
      421 aiakeyyssa mqlcgvrggg naaaqalfwl akkgfsvvla feserdrnaa imlarrfafd
      481 cnimlagpdd rtslet
//
LOCUS       XP_016668982             496 aa            linear   PLN 06-AUG-2024
DEFINITION  stomatal closure-related actin-binding protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016668982
VERSION     XP_016668982.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813493.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..496
                     /product="stomatal closure-related actin-binding protein
                     1"
                     /calculated_mol_wt=54951
     Region          57..97
                     /region_name="SCAB-ABD"
                     /note="Actin-binding domain of plant-specific
                     actin-binding protein; pfam16711"
                     /db_xref="CDD:374744"
     Region          102..269
                     /region_name="SCAB_CC"
                     /note="Coiled-coil regions of plant-specific actin-binding
                     protein; pfam16712"
                     /db_xref="CDD:465244"
     Region          283..380
                     /region_name="SCAB-Ig"
                     /note="Ig domain of plant-specific actin-binding protein;
                     pfam16709"
                     /db_xref="CDD:465243"
     Site            order(291..293,316,325..330,332,334,336..340)
                     /site_type="other"
                     /note="PH domain interface [polypeptide binding]"
                     /db_xref="CDD:212565"
     Region          383..490
                     /region_name="SCAB-PH"
                     /note="PH domain of plant-specific actin-binding protein;
                     pfam17684"
                     /db_xref="CDD:407577"
     CDS             1..496
                     /gene="LOC107889152"
                     /coded_by="XM_016813493.2:86..1576"
                     /db_xref="GeneID:107889152"
ORIGIN      
        1 mtrmsrtfgd tmqkeavpav sanvifasts srfpsyrigs nnqiidaken pkvlsmkevv
       61 aretallleq qqrlsvrdla skfekglaaa tklseeaklr eaaslekhvl lkklrdales
      121 lkgrvagrnk ddvveaismv ealavqltqr egeliqekae vkklanflkq asqdakklvd
      181 eerafaraei enaraavqrv eealqehekm sratgkqdle elmkevqear riimlhqpsk
      241 vmdmehelra lriqlaeksk rslllqkela rskgvkdnls nlfeldgaet lgsylkikpc
      301 sdiapelskc siqwyrvsse ggkkelisga cksvyapepf dvgrslqaei iydgqliklt
      361 ttgaidpaag lgnyvealvr khdvefnviv tqmngvdqps esihvlhvgk mrmklrkgkt
      421 aiakeyyssa mqlcgvrggg naaaqalfwl akkgfsvvla feserdrnaa imlarrfafd
      481 cnimlagpdd rtslet
//
LOCUS       XP_040941810             496 aa            linear   PLN 06-AUG-2024
DEFINITION  stomatal closure-related actin-binding protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_040941810
VERSION     XP_040941810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085876.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..496
                     /product="stomatal closure-related actin-binding protein
                     1"
                     /calculated_mol_wt=54951
     Region          57..97
                     /region_name="SCAB-ABD"
                     /note="Actin-binding domain of plant-specific
                     actin-binding protein; pfam16711"
                     /db_xref="CDD:374744"
     Region          102..269
                     /region_name="SCAB_CC"
                     /note="Coiled-coil regions of plant-specific actin-binding
                     protein; pfam16712"
                     /db_xref="CDD:465244"
     Region          283..380
                     /region_name="SCAB-Ig"
                     /note="Ig domain of plant-specific actin-binding protein;
                     pfam16709"
                     /db_xref="CDD:465243"
     Site            order(291..293,316,325..330,332,334,336..340)
                     /site_type="other"
                     /note="PH domain interface [polypeptide binding]"
                     /db_xref="CDD:212565"
     Region          383..490
                     /region_name="SCAB-PH"
                     /note="PH domain of plant-specific actin-binding protein;
                     pfam17684"
                     /db_xref="CDD:407577"
     CDS             1..496
                     /gene="LOC107889152"
                     /coded_by="XM_041085876.1:170..1660"
                     /db_xref="GeneID:107889152"
ORIGIN      
        1 mtrmsrtfgd tmqkeavpav sanvifasts srfpsyrigs nnqiidaken pkvlsmkevv
       61 aretallleq qqrlsvrdla skfekglaaa tklseeaklr eaaslekhvl lkklrdales
      121 lkgrvagrnk ddvveaismv ealavqltqr egeliqekae vkklanflkq asqdakklvd
      181 eerafaraei enaraavqrv eealqehekm sratgkqdle elmkevqear riimlhqpsk
      241 vmdmehelra lriqlaeksk rslllqkela rskgvkdnls nlfeldgaet lgsylkikpc
      301 sdiapelskc siqwyrvsse ggkkelisga cksvyapepf dvgrslqaei iydgqliklt
      361 ttgaidpaag lgnyvealvr khdvefnviv tqmngvdqps esihvlhvgk mrmklrkgkt
      421 aiakeyyssa mqlcgvrggg naaaqalfwl akkgfsvvla feserdrnaa imlarrfafd
      481 cnimlagpdd rtslet
//
LOCUS       XP_040941811             496 aa            linear   PLN 06-AUG-2024
DEFINITION  stomatal closure-related actin-binding protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_040941811
VERSION     XP_040941811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085877.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..496
                     /product="stomatal closure-related actin-binding protein
                     1"
                     /calculated_mol_wt=54951
     Region          57..97
                     /region_name="SCAB-ABD"
                     /note="Actin-binding domain of plant-specific
                     actin-binding protein; pfam16711"
                     /db_xref="CDD:374744"
     Region          102..269
                     /region_name="SCAB_CC"
                     /note="Coiled-coil regions of plant-specific actin-binding
                     protein; pfam16712"
                     /db_xref="CDD:465244"
     Region          283..380
                     /region_name="SCAB-Ig"
                     /note="Ig domain of plant-specific actin-binding protein;
                     pfam16709"
                     /db_xref="CDD:465243"
     Site            order(291..293,316,325..330,332,334,336..340)
                     /site_type="other"
                     /note="PH domain interface [polypeptide binding]"
                     /db_xref="CDD:212565"
     Region          383..490
                     /region_name="SCAB-PH"
                     /note="PH domain of plant-specific actin-binding protein;
                     pfam17684"
                     /db_xref="CDD:407577"
     CDS             1..496
                     /gene="LOC107889152"
                     /coded_by="XM_041085877.1:203..1693"
                     /db_xref="GeneID:107889152"
ORIGIN      
        1 mtrmsrtfgd tmqkeavpav sanvifasts srfpsyrigs nnqiidaken pkvlsmkevv
       61 aretallleq qqrlsvrdla skfekglaaa tklseeaklr eaaslekhvl lkklrdales
      121 lkgrvagrnk ddvveaismv ealavqltqr egeliqekae vkklanflkq asqdakklvd
      181 eerafaraei enaraavqrv eealqehekm sratgkqdle elmkevqear riimlhqpsk
      241 vmdmehelra lriqlaeksk rslllqkela rskgvkdnls nlfeldgaet lgsylkikpc
      301 sdiapelskc siqwyrvsse ggkkelisga cksvyapepf dvgrslqaei iydgqliklt
      361 ttgaidpaag lgnyvealvr khdvefnviv tqmngvdqps esihvlhvgk mrmklrkgkt
      421 aiakeyyssa mqlcgvrggg naaaqalfwl akkgfsvvla feserdrnaa imlarrfafd
      481 cnimlagpdd rtslet
//
LOCUS       XP_016668983             243 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L7-4 [Gossypium hirsutum].
ACCESSION   XP_016668983
VERSION     XP_016668983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813494.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..243
                     /product="60S ribosomal protein L7-4"
                     /calculated_mol_wt=28186
     Region          11..243
                     /region_name="uL30_euk"
                     /note="60S ribosomal protein uL30, eukaryotic form;
                     TIGR01310"
                     /db_xref="CDD:273548"
     CDS             1..243
                     /gene="LOC107889153"
                     /coded_by="XM_016813494.2:163..894"
                     /db_xref="GeneID:107889153"
ORIGIN      
        1 mgeevkalvp esllkknkrn eewelakkqe leaakkknve nrklifnrak qyakeyeaqe
       61 keliqlkrea klkggfyvdp eakllfivri rginamhprt rkilqllrlr qifngvflkv
      121 nkatmnmlhl vepyvtygyp nlksvrelvy krgfgklnkq rvaltdnaiv eqalgkfgii
      181 cvedliheim tvgphfkean nflwpfklka plgglkkkrn hyveggdagn renyinelir
      241 rmn
//
LOCUS       XP_016668984             489 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein YtfP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016668984
VERSION     XP_016668984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813495.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..489
                     /product="uncharacterized protein YtfP isoform X1"
                     /calculated_mol_wt=52926
     Region          87..473
                     /region_name="HI0933_like"
                     /note="HI0933-like protein; cl42162"
                     /db_xref="CDD:455507"
     CDS             1..489
                     /gene="LOC107889154"
                     /coded_by="XM_016813495.2:90..1559"
                     /db_xref="GeneID:107889154"
ORIGIN      
        1 msftlpryfl rfhfnftart estraknnhg ylflapkant akfttasipg dkpqklsaee
       61 llvvvgggaa gvygairakt vasnlnvlvi ekgkllskvk isgggrcnvt nghsadnlvl
      121 adhyprgnke lrgsffnvhg ptdtmswfvd kgvdlktedd grvfpvsnns ssvidcllse
      181 akcrgvslqt gklvtsasas asgkfllkie krtlksvelv eadylliasg ssqqghnlav
      241 qlghsivdpv pslftfkied aqlvelsgvt fskvivklkl envqrnipql tqvgpmlvth
      301 wglsgpailr lsawgaryly ssgykgklsv dfvpdlhved lksmlsqqkn rflkqkvlns
      361 cpmelqlikr fwkyildreg lvgdtlwasv snssivsian llkhctfevk gkgqfkdefv
      421 taggvplsei hlntmesriq pnlyfagevl nvdgvtggfn fqnawsggyi agstigrlaa
      481 gnanlvgal
//
LOCUS       XP_016668985             446 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein YtfP isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016668985
VERSION     XP_016668985.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813496.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..446
                     /product="uncharacterized protein YtfP isoform X2"
                     /calculated_mol_wt=48635
     Region          55..430
                     /region_name="HI0933_like"
                     /note="HI0933-like protein; cl42162"
                     /db_xref="CDD:455507"
     CDS             1..446
                     /gene="LOC107889154"
                     /coded_by="XM_016813496.2:52..1392"
                     /db_xref="GeneID:107889154"
ORIGIN      
        1 msftlpryfl rfhfnftart estraknnhg ylflapkant akfttasipg dkpqkvkisg
       61 ggrcnvtngh sadnlvladh yprgnkelrg sffnvhgptd tmswfvdkgv dlkteddgrv
      121 fpvsnnsssv idcllseakc rgvslqtgkl vtsasasasg kfllkiekrt lksvelvead
      181 ylliasgssq qghnlavqlg hsivdpvpsl ftfkiedaql velsgvtfsk vivklklenv
      241 qrnipqltqv gpmlvthwgl sgpailrlsa wgarylyssg ykgklsvdfv pdlhvedlks
      301 mlsqqknrfl kqkvlnscpm elqlikrfwk yildreglvg dtlwasvsns sivsianllk
      361 hctfevkgkg qfkdefvtag gvplseihln tmesriqpnl yfagevlnvd gvtggfnfqn
      421 awsggyiags tigrlaagna nlvgal
//
LOCUS       XP_016668986             222 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation factor 1-beta 2 [Gossypium hirsutum].
ACCESSION   XP_016668986
VERSION     XP_016668986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813497.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..222
                     /product="elongation factor 1-beta 2"
                     /calculated_mol_wt=23962
     Region          <5..63
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
     Region          136..222
                     /region_name="EF1_GNE"
                     /note="EF-1 guanine nucleotide exchange domain; pfam00736"
                     /db_xref="CDD:459919"
     CDS             1..222
                     /gene="LOC107889155"
                     /coded_by="XM_016813497.2:247..915"
                     /db_xref="GeneID:107889155"
ORIGIN      
        1 maitfsdlht esglkslndf ltgksyisgd kltkddikvy aavlknpggs fpnvsqwync
       61 vsshlassfp gkavgvslgg kadpaqsaea kspaaddddd dldlfgdete edkkaaeere
      121 aakksakkke sgkssvlmdv kpwddetdmk kleeavrsve mpgllwgask lvavgygikk
      181 lqimltivdd lvsvdtliee hltveprney iqscdivafn ki
//
LOCUS       XP_040941812             870 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941812
VERSION     XP_040941812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085878.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..870
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95364
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..870
                     /gene="LOC107889156"
                     /coded_by="XM_041085878.1:282..2894"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkrsvrpr lylsidsdte
//
LOCUS       XP_040941814             870 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941814
VERSION     XP_040941814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085880.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..870
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95364
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..870
                     /gene="LOC107889156"
                     /coded_by="XM_041085880.1:282..2894"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkrsvrpr lylsidsdte
//
LOCUS       XP_040941815             870 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941815
VERSION     XP_040941815.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085881.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..870
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95364
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..870
                     /gene="LOC107889156"
                     /coded_by="XM_041085881.1:282..2894"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkrsvrpr lylsidsdte
//
LOCUS       XP_040941816             870 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941816
VERSION     XP_040941816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085882.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..870
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95364
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..870
                     /gene="LOC107889156"
                     /coded_by="XM_041085882.1:308..2920"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkrsvrpr lylsidsdte
//
LOCUS       XP_040941817             870 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941817
VERSION     XP_040941817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085883.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..870
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95364
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..870
                     /gene="LOC107889156"
                     /coded_by="XM_041085883.1:282..2894"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkrsvrpr lylsidsdte
//
LOCUS       XP_040941818             855 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941818
VERSION     XP_040941818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085884.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..855
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=93631
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..855
                     /gene="LOC107889156"
                     /coded_by="XM_041085884.1:277..2844"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkr
//
LOCUS       XP_040941819             855 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941819
VERSION     XP_040941819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085885.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..855
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=93631
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..855
                     /gene="LOC107889156"
                     /coded_by="XM_041085885.1:282..2849"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkr
//
LOCUS       XP_040941820             855 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941820
VERSION     XP_040941820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085886.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..855
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=93631
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..855
                     /gene="LOC107889156"
                     /coded_by="XM_041085886.1:277..2844"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsg kdgedpsvnq daggtydfts ngieldsvsl nvdaayeftd pnqsapagna
      601 evivlsdsde eneilisppt vykdnhnqnd ggglgfpvap pgishpysee pplgpaanlg
      661 lfttndefdi plwslptgtq dgsgfqlfnt dpdvadtlvd lqrsslncps tmngyplape
      721 ttmgstnlvp tssigqvdtn lndslvdstf fggedpslqi flpthpsgas aeadlrdqad
      781 vpngddwisl rlgggatggh gdstivnglk srqqipsker amdaaslllg mndsrngkss
      841 rqrtespfsf prqkr
//
LOCUS       XP_040941821             837 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941821
VERSION     XP_040941821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085887.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..837
                     /product="E3 SUMO-protein ligase SIZ1 isoform X3"
                     /calculated_mol_wt=91980
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..837
                     /gene="LOC107889156"
                     /coded_by="XM_041085887.1:277..2790"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsd aayeftdpnq sapagnaevi vlsdsdeene ilispptvyk dnhnqndggg
      601 lgfpvappgi shpyseeppl gpaanlglft tndefdiplw slptgtqdgs gfqlfntdpd
      661 vadtlvdlqr sslncpstmn gyplapettm gstnlvptss igqvdtnlnd slvdstffgg
      721 edpslqiflp thpsgasaea dlrdqadvpn gddwislrlg ggatgghgds tivnglksrq
      781 qipskeramd aaslllgmnd srngkssrqr tespfsfprq krsvrprlyl sidsdte
//
LOCUS       XP_040941822             822 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941822
VERSION     XP_040941822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085888.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..822
                     /product="E3 SUMO-protein ligase SIZ1 isoform X4"
                     /calculated_mol_wt=90247
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..822
                     /gene="LOC107889156"
                     /coded_by="XM_041085888.1:283..2751"
                     /db_xref="GeneID:107889156"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd diyrkmqvsg atelaskgqg vsdssnvkik gevedtfqpd vkvrcpcgss
      121 sesddiirck dptcqvrqhi gcviipekpm egnpalpdff ccelcrlkra dpfwltianp
      181 lypvklttan iptdgtnpmq svektfqltr adrellakqe ydvqawcmll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiitpftk dginkitltg cdarffcfgv
      301 rivkrrtvqq ilnmipkend gecfedalsr vrrcvgggta tdngdsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpcv hmgcfdlevf velnqrsrkw qcpiclknys lehviidpyf
      421 nritckmrnc gediteievk pdgswrakvk senerrelgd lalwhtpdst lcesgsvedk
      481 ptaeiskqik legpseghtg lklgikknqn gywhfskped lntssasilh drlrheqklt
      541 pmsssatgsd aayeftdpnq sapagnaevi vlsdsdeene ilispptvyk dnhnqndggg
      601 lgfpvappgi shpyseeppl gpaanlglft tndefdiplw slptgtqdgs gfqlfntdpd
      661 vadtlvdlqr sslncpstmn gyplapettm gstnlvptss igqvdtnlnd slvdstffgg
      721 edpslqiflp thpsgasaea dlrdqadvpn gddwislrlg ggatgghgds tivnglksrq
      781 qipskeramd aaslllgmnd srngkssrqr tespfsfprq kr
//
LOCUS       XP_016668990              98 aa            linear   PLN 06-AUG-2024
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
            [Gossypium hirsutum].
ACCESSION   XP_016668990
VERSION     XP_016668990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813501.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 2"
                     /calculated_mol_wt=10959
     Region          23..92
                     /region_name="L51_S25_CI-B8"
                     /note="Mitochondrial ribosomal protein L51 / S25 / CI-B8
                     domain; smart00916"
                     /db_xref="CDD:197984"
     CDS             1..98
                     /gene="LOC107889157"
                     /coded_by="XM_016813501.2:384..680"
                     /db_xref="GeneID:107889157"
ORIGIN      
        1 mawrnqlsrn lkelrilfcq tspasapars fveknykdlk tlnpklsili recrgiepqm
       61 warydmgvek gvrleglsep qilkaledla kagastka
//
LOCUS       XP_016668992             877 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016668992
VERSION     XP_016668992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813503.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..877
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95930
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          365..414
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..877
                     /gene="LOC107889158"
                     /coded_by="XM_016813503.2:311..2944"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng tsikgvpvra inrpgsqllg angrddgpii spcikdgink itltgcdarv
      301 fcfgvrivkr rtvqqilnti pkendgerle dalcrvrrcv gggtatdngg sdsdlevvad
      361 ffgvnlrcpm sgsrmkvagr fkpcihmgcf dlevfvelnq rsrkwqcpic lknyslehii
      421 idpyfnrits kmsncgedit eievkpdgsw rakaksener relgdlalwh spdstlcesg
      481 svedkptaei skqiklegte gqtglklgik knqngywqfs kpedlnnssa srlqdrlrle
      541 qkflpmsssa tgsgkdgeda svnqdaggty dftsngield svplnidsay eftdqnqspt
      601 agnaevivls dsdeeneili spptmykdnh nqndggglgf pvappgishp yseepplgpa
      661 anlglftpnd efdmplwslp sgsqdgsgfq lfntdpdvad tlvdlqrssl ncpstingyp
      721 lapettlgst tlvptcsigq vdtnlndslv dttlfggedp slqiflpthp sgasaesglr
      781 dqadvsngir tddwislrlg ggasgghgds ttvnglnsrq pipskeramd taslllgmnd
      841 srngkssrqr tespfsfprq krsvrprlyl sidsdte
//
LOCUS       XP_016668993             877 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016668993
VERSION     XP_016668993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813504.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..877
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95930
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          365..414
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..877
                     /gene="LOC107889158"
                     /coded_by="XM_016813504.2:263..2896"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng tsikgvpvra inrpgsqllg angrddgpii spcikdgink itltgcdarv
      301 fcfgvrivkr rtvqqilnti pkendgerle dalcrvrrcv gggtatdngg sdsdlevvad
      361 ffgvnlrcpm sgsrmkvagr fkpcihmgcf dlevfvelnq rsrkwqcpic lknyslehii
      421 idpyfnrits kmsncgedit eievkpdgsw rakaksener relgdlalwh spdstlcesg
      481 svedkptaei skqiklegte gqtglklgik knqngywqfs kpedlnnssa srlqdrlrle
      541 qkflpmsssa tgsgkdgeda svnqdaggty dftsngield svplnidsay eftdqnqspt
      601 agnaevivls dsdeeneili spptmykdnh nqndggglgf pvappgishp yseepplgpa
      661 anlglftpnd efdmplwslp sgsqdgsgfq lfntdpdvad tlvdlqrssl ncpstingyp
      721 lapettlgst tlvptcsigq vdtnlndslv dttlfggedp slqiflpthp sgasaesglr
      781 dqadvsngir tddwislrlg ggasgghgds ttvnglnsrq pipskeramd taslllgmnd
      841 srngkssrqr tespfsfprq krsvrprlyl sidsdte
//
LOCUS       XP_016668995             877 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016668995
VERSION     XP_016668995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..877
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95930
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          365..414
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..877
                     /gene="LOC107889158"
                     /coded_by="XM_016813506.2:258..2891"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng tsikgvpvra inrpgsqllg angrddgpii spcikdgink itltgcdarv
      301 fcfgvrivkr rtvqqilnti pkendgerle dalcrvrrcv gggtatdngg sdsdlevvad
      361 ffgvnlrcpm sgsrmkvagr fkpcihmgcf dlevfvelnq rsrkwqcpic lknyslehii
      421 idpyfnrits kmsncgedit eievkpdgsw rakaksener relgdlalwh spdstlcesg
      481 svedkptaei skqiklegte gqtglklgik knqngywqfs kpedlnnssa srlqdrlrle
      541 qkflpmsssa tgsgkdgeda svnqdaggty dftsngield svplnidsay eftdqnqspt
      601 agnaevivls dsdeeneili spptmykdnh nqndggglgf pvappgishp yseepplgpa
      661 anlglftpnd efdmplwslp sgsqdgsgfq lfntdpdvad tlvdlqrssl ncpstingyp
      721 lapettlgst tlvptcsigq vdtnlndslv dttlfggedp slqiflpthp sgasaesglr
      781 dqadvsngir tddwislrlg ggasgghgds ttvnglnsrq pipskeramd taslllgmnd
      841 srngkssrqr tespfsfprq krsvrprlyl sidsdte
//
LOCUS       XP_016668991             877 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016668991
VERSION     XP_016668991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813502.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..877
                     /product="E3 SUMO-protein ligase SIZ1 isoform X1"
                     /calculated_mol_wt=95930
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          365..414
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..877
                     /gene="LOC107889158"
                     /coded_by="XM_016813502.2:295..2928"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng tsikgvpvra inrpgsqllg angrddgpii spcikdgink itltgcdarv
      301 fcfgvrivkr rtvqqilnti pkendgerle dalcrvrrcv gggtatdngg sdsdlevvad
      361 ffgvnlrcpm sgsrmkvagr fkpcihmgcf dlevfvelnq rsrkwqcpic lknyslehii
      421 idpyfnrits kmsncgedit eievkpdgsw rakaksener relgdlalwh spdstlcesg
      481 svedkptaei skqiklegte gqtglklgik knqngywqfs kpedlnnssa srlqdrlrle
      541 qkflpmsssa tgsgkdgeda svnqdaggty dftsngield svplnidsay eftdqnqspt
      601 agnaevivls dsdeeneili spptmykdnh nqndggglgf pvappgishp yseepplgpa
      661 anlglftpnd efdmplwslp sgsqdgsgfq lfntdpdvad tlvdlqrssl ncpstingyp
      721 lapettlgst tlvptcsigq vdtnlndslv dttlfggedp slqiflpthp sgasaesglr
      781 dqadvsngir tddwislrlg ggasgghgds ttvnglnsrq pipskeramd taslllgmnd
      841 srngkssrqr tespfsfprq krsvrprlyl sidsdte
//
LOCUS       XP_016668996             872 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016668996
VERSION     XP_016668996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813507.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..872
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=95444
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..872
                     /gene="LOC107889158"
                     /coded_by="XM_016813507.2:294..2912"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiispcik dginkitltg cdarvfcfgv
      301 rivkrrtvqq ilntipkend gerledalcr vrrcvgggta tdnggsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpci hmgcfdlevf velnqrsrkw qcpiclknys lehiiidpyf
      421 nritskmsnc gediteievk pdgswrakak senerrelgd lalwhspdst lcesgsvedk
      481 ptaeiskqik legtegqtgl klgikknqng ywqfskpedl nnssasrlqd rlrleqkflp
      541 msssatgsgk dgedasvnqd aggtydftsn gieldsvpln idsayeftdq nqsptagnae
      601 vivlsdsdee neilispptm ykdnhnqndg gglgfpvapp gishpyseep plgpaanlgl
      661 ftpndefdmp lwslpsgsqd gsgfqlfntd pdvadtlvdl qrsslncpst ingyplapet
      721 tlgsttlvpt csigqvdtnl ndslvdttlf ggedpslqif lpthpsgasa esglrdqadv
      781 sngirtddwi slrlgggasg ghgdsttvng lnsrqpipsk eramdtasll lgmndsrngk
      841 ssrqrtespf sfprqkrsvr prlylsidsd te
//
LOCUS       XP_040941823             872 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941823
VERSION     XP_040941823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085889.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..872
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=95444
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..872
                     /gene="LOC107889158"
                     /coded_by="XM_041085889.1:311..2929"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiispcik dginkitltg cdarvfcfgv
      301 rivkrrtvqq ilntipkend gerledalcr vrrcvgggta tdnggsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpci hmgcfdlevf velnqrsrkw qcpiclknys lehiiidpyf
      421 nritskmsnc gediteievk pdgswrakak senerrelgd lalwhspdst lcesgsvedk
      481 ptaeiskqik legtegqtgl klgikknqng ywqfskpedl nnssasrlqd rlrleqkflp
      541 msssatgsgk dgedasvnqd aggtydftsn gieldsvpln idsayeftdq nqsptagnae
      601 vivlsdsdee neilispptm ykdnhnqndg gglgfpvapp gishpyseep plgpaanlgl
      661 ftpndefdmp lwslpsgsqd gsgfqlfntd pdvadtlvdl qrsslncpst ingyplapet
      721 tlgsttlvpt csigqvdtnl ndslvdttlf ggedpslqif lpthpsgasa esglrdqadv
      781 sngirtddwi slrlgggasg ghgdsttvng lnsrqpipsk eramdtasll lgmndsrngk
      841 ssrqrtespf sfprqkrsvr prlylsidsd te
//
LOCUS       XP_040941824             872 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941824
VERSION     XP_040941824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085890.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..872
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=95444
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..872
                     /gene="LOC107889158"
                     /coded_by="XM_041085890.1:262..2880"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiispcik dginkitltg cdarvfcfgv
      301 rivkrrtvqq ilntipkend gerledalcr vrrcvgggta tdnggsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpci hmgcfdlevf velnqrsrkw qcpiclknys lehiiidpyf
      421 nritskmsnc gediteievk pdgswrakak senerrelgd lalwhspdst lcesgsvedk
      481 ptaeiskqik legtegqtgl klgikknqng ywqfskpedl nnssasrlqd rlrleqkflp
      541 msssatgsgk dgedasvnqd aggtydftsn gieldsvpln idsayeftdq nqsptagnae
      601 vivlsdsdee neilispptm ykdnhnqndg gglgfpvapp gishpyseep plgpaanlgl
      661 ftpndefdmp lwslpsgsqd gsgfqlfntd pdvadtlvdl qrsslncpst ingyplapet
      721 tlgsttlvpt csigqvdtnl ndslvdttlf ggedpslqif lpthpsgasa esglrdqadv
      781 sngirtddwi slrlgggasg ghgdsttvng lnsrqpipsk eramdtasll lgmndsrngk
      841 ssrqrtespf sfprqkrsvr prlylsidsd te
//
LOCUS       XP_040941825             872 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941825
VERSION     XP_040941825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085891.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..872
                     /product="E3 SUMO-protein ligase SIZ1 isoform X2"
                     /calculated_mol_wt=95444
     Region          14..45
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          114..165
                     /region_name="PHD_Bye1p_SIZ1_like"
                     /note="PHD domain found in Saccharomyces cerevisiae bypass
                     of ESS1 protein 1 (Bye1p), the E3 Sumo Ligase SIZ1, and
                     similar proteins; cd15570"
                     /db_xref="CDD:277045"
     Site            order(114,125..129,135,160)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277045"
     Region          360..409
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..872
                     /gene="LOC107889158"
                     /coded_by="XM_041085891.1:257..2875"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 mdlvasckdk layfrikelk dvltqlglsk qgkkqdlver ilgalsdeqv tkmwakrtpv
       61 gkedvaklvd dtyrkmqvsg atelaskgqg vpdgnnvkik gevddpfqpd vkvrcpcgns
      121 letdniimce dprcqvgqhf gcviipekpm egnpavpdff ycelcrlkra dpfwltianp
      181 fypvklaian iptdgtnpmq svektfqitr adkellskqe ydvqawclll ndkvpfrmqw
      241 pqyadlqvng vpvrainrpg sqllgangrd dgpiispcik dginkitltg cdarvfcfgv
      301 rivkrrtvqq ilntipkend gerledalcr vrrcvgggta tdnggsdsdl evvadffgvn
      361 lrcpmsgsrm kvagrfkpci hmgcfdlevf velnqrsrkw qcpiclknys lehiiidpyf
      421 nritskmsnc gediteievk pdgswrakak senerrelgd lalwhspdst lcesgsvedk
      481 ptaeiskqik legtegqtgl klgikknqng ywqfskpedl nnssasrlqd rlrleqkflp
      541 msssatgsgk dgedasvnqd aggtydftsn gieldsvpln idsayeftdq nqsptagnae
      601 vivlsdsdee neilispptm ykdnhnqndg gglgfpvapp gishpyseep plgpaanlgl
      661 ftpndefdmp lwslpsgsqd gsgfqlfntd pdvadtlvdl qrsslncpst ingyplapet
      721 tlgsttlvpt csigqvdtnl ndslvdttlf ggedpslqif lpthpsgasa esglrdqadv
      781 sngirtddwi slrlgggasg ghgdsttvng lnsrqpipsk eramdtasll lgmndsrngk
      841 ssrqrtespf sfprqkrsvr prlylsidsd te
//
LOCUS       XP_016668997             728 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase SIZ1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016668997
VERSION     XP_016668997.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813508.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..728
                     /product="E3 SUMO-protein ligase SIZ1 isoform X3"
                     /calculated_mol_wt=79471
     Region          216..265
                     /region_name="SP-RING_Siz-like"
                     /note="SP-RING finger found in Arabidopsis thaliana E3
                     SUMO-protein ligase SIZ1 (AtSIZ1) and similar proteins;
                     cd16792"
                     /db_xref="CDD:438446"
     CDS             1..728
                     /gene="LOC107889158"
                     /coded_by="XM_016813508.2:222..2408"
                     /db_xref="GeneID:107889158"
ORIGIN      
        1 megnpavpdf fycelcrlkr adpfwltian pfypvklaia niptdgtnpm qsvektfqit
       61 radkellskq eydvqawcll lndkvpfrmq wpqyadlqvn gtsikgvpvr ainrpgsqll
      121 gangrddgpi ispcikdgin kitltgcdar vfcfgvrivk rrtvqqilnt ipkendgerl
      181 edalcrvrrc vgggtatdng gsdsdlevva dffgvnlrcp msgsrmkvag rfkpcihmgc
      241 fdlevfveln qrsrkwqcpi clknyslehi iidpyfnrit skmsncgedi teievkpdgs
      301 wrakaksene rrelgdlalw hspdstlces gsvedkptae iskqiklegt egqtglklgi
      361 kknqngywqf skpedlnnss asrlqdrlrl eqkflpmsss atgsgkdged asvnqdaggt
      421 ydftsngiel dsvplnidsa yeftdqnqsp tagnaevivl sdsdeeneil ispptmykdn
      481 hnqndggglg fpvappgish pyseepplgp aanlglftpn defdmplwsl psgsqdgsgf
      541 qlfntdpdva dtlvdlqrss lncpstingy plapettlgs ttlvptcsig qvdtnlndsl
      601 vdttlfgged pslqiflpth psgasaesgl rdqadvsngi rtddwislrl gggasgghgd
      661 sttvnglnsr qpipskeram dtaslllgmn dsrngkssrq rtespfsfpr qkrsvrprly
      721 lsidsdte
//
LOCUS       XP_040941826             686 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 209 [Gossypium hirsutum].
ACCESSION   XP_040941826
VERSION     XP_040941826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085892.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..686
                     /product="transmembrane protein 209"
                     /calculated_mol_wt=74773
     Region          18..680
                     /region_name="CytochromB561_N"
                     /note="Cytochrome B561, N terminal; pfam09786"
                     /db_xref="CDD:462899"
     CDS             1..686
                     /gene="LOC107889159"
                     /coded_by="XM_041085892.1:136..2196"
                     /db_xref="GeneID:107889159"
ORIGIN      
        1 mqaaagqdrg spplkpskfs vyqnptlsaa ltatslkpsk stflciislf sasafallst
       61 iysgngfadk fkfgnlsnev ayifakavqv asavvfvgtv falfkaiswh rskstsscls
      121 lvspskgtkn qpnltkrqlg llgvkskveq vapdsskkpp kskplaasss sdvlvplhps
      181 isgsdrksla ssnksntsgg nkmspfatps rsqgspssly lvpastssls srqtspgqep
      241 lvktpwstkr ssyakeitte eqleqflaev dekitesagk latppptisg fgiaspntva
      301 ssantsgttr stplrpvrms pgsqkfttpp kkgegelppp msmeeyveaf ehlgiypqie
      361 hwrdrlrqwf ssvllnplln kietshvqvm kaaaklnisv tinqvgndps tngnpavlsp
      421 pdrskewqps ftleeegllh qlratlvqtl eastpkpian qlqfpqqnpf ipvmqecida
      481 itkhqklhsl mkgewmkgll pqnsvradyt vrrirelaeg tclknyeyqg ngdvydkknk
      541 kwthelptds hlllylfcaf lehpkwmlhv eptsyagaqs sknplffgtl prdripekyi
      601 aivsgvpltl hpgacilaig kqslpifaly wdkklqfslq grtalwdsil llchrikdgy
      661 ggivrgmhig ssalnllsvl qpened
//
LOCUS       XP_040941827             107 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein Sec61 subunit beta [Gossypium hirsutum].
ACCESSION   XP_040941827
VERSION     XP_040941827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085893.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="protein transport protein Sec61 subunit beta"
                     /calculated_mol_wt=10581
     Region          59..96
                     /region_name="Sec61_beta"
                     /note="Sec61beta family; pfam03911"
                     /db_xref="CDD:427582"
     CDS             1..107
                     /gene="LOC121212666"
                     /coded_by="XM_041085893.1:246..569"
                     /db_xref="GeneID:121212666"
ORIGIN      
        1 mprgssqsqs stssstsrpg vmaprgsaaa aagmrrrriv ggsssatasg svgsgsggnm
       61 lrfytddapg lkisptvvlv mslcfigfvt alhvfgklyr akagagp
//
LOCUS       XP_016668999             265 aa            linear   PLN 06-AUG-2024
DEFINITION  fasciclin-like arabinogalactan protein 12 [Gossypium hirsutum].
ACCESSION   XP_016668999
VERSION     XP_016668999.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016668999.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..265
                     /product="fasciclin-like arabinogalactan protein 12"
                     /calculated_mol_wt=27854
     Region          65..200
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..265
                     /gene="LOC107889160"
                     /coded_by="XM_016813510.2:78..875"
                     /db_xref="GeneID:107889160"
ORIGIN      
        1 mimkqfdhlm lffllhtccs tlltlaqapa aapvvapkaa pvlapasspa ppgptnvtki
       61 lekagqfstf irlmkatqva nqllgqlnnt nngitifapt dsafsslksg tlnslsdeqk
      121 veliqfhiip tylssaqfqt isnplrtqag dsgdgkfpln vtstgdtvni tsgltntsvs
      181 gtvytdgqla vyqidrvlqp lqifdprppa papapakskk kkdddvadsp addstdnska
      241 vrftmgnnvg lfgvtaivli alisl
//
LOCUS       XP_016670255             320 aa            linear   PLN 06-AUG-2024
DEFINITION  hyccin [Gossypium hirsutum].
ACCESSION   XP_016670255
VERSION     XP_016670255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016814766.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..320
                     /product="hyccin"
                     /calculated_mol_wt=34479
     Region          52..296
                     /region_name="Hyccin"
                     /note="pfam09790"
                     /db_xref="CDD:462903"
     CDS             1..320
                     /gene="LOC107890290"
                     /coded_by="XM_016814766.2:177..1139"
                     /db_xref="GeneID:107890290"
ORIGIN      
        1 msssnpgsps atatssssas sfsskahsci qalssilstv pssvsssssl lhdptvssqi
       61 stllrdpdsg sgdnnlcrwl ydtfhspdpe lklvvlrfvp iiagiylsri alrkslagfe
      121 aillalyahe ttardgqpis vnvpdltqps iyheakssak sqatelnlav isptlephgt
      181 mrssrrariv gvalelyysk isqmpvsskl efcefcdiwa tgiqnkpsss ssskqktill
      241 pwellqpslr ilghcllgah kskklyeaas matkslyers lrdidakail atssllrlek
      301 mamdpklnvd hteidmslal
//
LOCUS       XP_016669000             313 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 4 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016669000
VERSION     XP_016669000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813511.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="non-specific lipid transfer protein GPI-anchored
                     4 isoform X1"
                     /calculated_mol_wt=31882
     Region          55..120
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     Region          179..244
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..313
                     /gene="LOC107889161"
                     /coded_by="XM_016813511.2:103..1044"
                     /db_xref="GeneID:107889161"
ORIGIN      
        1 maakqttilv aailvtafyg gavtsaqapa agpamamsps amaptpdcmt nlfnlsdclt
       61 yveagsnltk pdkpccpela glvesspqcl cylldknata nygfnidmdr alklpdvchv
      121 ktppvslcsa ivgapigvpt qstegsmspa septgsvayg pspsamaptp dcmtnlfnls
      181 dclpyvtags nqtkpdkpcc pelaglvess pqclcllfdk natssygvdi dmdralklpn
      241 vchvktppvs lcstiygaap vgvptsgtev slspglapsp sngnssgasn maifglasfi
      301 alpisflpml fgi
//
LOCUS       XP_016669001             311 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 4 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016669001
VERSION     XP_016669001.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813512.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..311
                     /product="non-specific lipid transfer protein GPI-anchored
                     4 isoform X2"
                     /calculated_mol_wt=31712
     Region          55..120
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     Region          179..244
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..311
                     /gene="LOC107889161"
                     /coded_by="XM_016813512.2:95..1030"
                     /db_xref="GeneID:107889161"
ORIGIN      
        1 maakqttilv aailvtafyg gavtsaqapa agpamamsps amaptpdcmt nlfnlsdclt
       61 yveagsnltk pdkpccpela glvesspqcl cylldknata nygfnidmdr alklpdvchv
      121 ktppvslcsa ivgapigvpt qstegsmspa septgsvayg pspsamaptp dcmtnlfnls
      181 dclpyvtags nqtkpdkpcc pelaglvess pqclcllfdk natssygvdi dmdralklpn
      241 vchvktppvs lcstiygaap vgvptsgtev slspapspsn gnssgasnma ifglasfial
      301 pisflpmlfg i
//
LOCUS       XP_040941828             410 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and MATH domain-containing protein 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941828
VERSION     XP_040941828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085894.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..410
                     /product="BTB/POZ and MATH domain-containing protein 4
                     isoform X1"
                     /calculated_mol_wt=45272
     Region          36..169
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(90,140..142)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          191..313
                     /region_name="BTB_POZ_BPM_plant"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in plant
                     BTB/POZ-MATH (BPM) protein family; cd18280"
                     /db_xref="CDD:349589"
     Region          313..374
                     /region_name="BACK_AtBPM-like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     plant BTB/POZ-MATH (BPM) protein family; cd14736"
                     /db_xref="CDD:350516"
     CDS             1..410
                     /gene="LOC107890053"
                     /coded_by="XM_041085894.1:63..1295"
                     /db_xref="GeneID:107890053"
ORIGIN      
        1 mtngatspvt vatlkvehsp llsptssqsv tetvngfhrf viqgyslakg mgigkhivsd
       61 nftvggyrwa iyfypdgknp edsstyvsvf ialasegtdv ralfeltlmd qsgkgkhkvh
      121 shfdrslesg pytlkyrgsm wgykrffrra lletsdylkd dcliinctvg vvvsaidcsr
      181 lhsiqvpvsd igahfgmlle nmegsditfd vagekfrshk lvlaarspvf rteifdgvde
      241 qkkemvitdl eprvfkallh fiyrdtlsed aesvesssas lssvsetlia kllaaadryc
      301 lerlklmces rlcknisvns vakilalade yhatelkavc lrfaaenlaa vmrsdgfeyl
      361 kdncpllqse llktiagcee dyssggksrs vwaqlsdgtd tngrrvrqrt
//
LOCUS       XP_040941829             358 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and MATH domain-containing protein 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941829
VERSION     XP_040941829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085895.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="BTB/POZ and MATH domain-containing protein 4
                     isoform X2"
                     /calculated_mol_wt=39513
     Region          36..169
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(90,140..142)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          191..313
                     /region_name="BTB_POZ_BPM_plant"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in plant
                     BTB/POZ-MATH (BPM) protein family; cd18280"
                     /db_xref="CDD:349589"
     Region          313..>354
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     CDS             1..358
                     /gene="LOC107890053"
                     /coded_by="XM_041085895.1:64..1140"
                     /db_xref="GeneID:107890053"
ORIGIN      
        1 mtngatspvt vatlkvehsp llsptssqsv tetvngfhrf viqgyslakg mgigkhivsd
       61 nftvggyrwa iyfypdgknp edsstyvsvf ialasegtdv ralfeltlmd qsgkgkhkvh
      121 shfdrslesg pytlkyrgsm wgykrffrra lletsdylkd dcliinctvg vvvsaidcsr
      181 lhsiqvpvsd igahfgmlle nmegsditfd vagekfrshk lvlaarspvf rteifdgvde
      241 qkkemvitdl eprvfkallh fiyrdtlsed aesvesssas lssvsetlia kllaaadryc
      301 lerlklmces rlcknisvns vakilalade yhatelkavc lrfaaenlag iirslfmc
//
LOCUS       XP_016729717             234 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin [Gossypium hirsutum].
ACCESSION   XP_016729717
VERSION     XP_016729717.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874228.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) and transcript sequence (GALV01035104.1) annotated
            using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729717.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            assembly gap :: added 392 transcript bases to patch genome assembly
                            gap
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..234
                     /product="calmodulin"
                     /calculated_mol_wt=26131
     Region          1..124
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     Region          <118..167
                     /region_name="FAM192A_Fyv6_N"
                     /note="FAM192A/Fyv6, N-terminal domain; pfam10187"
                     /db_xref="CDD:462987"
     CDS             1..234
                     /gene="LOC107940778"
                     /coded_by="XM_016874228.2:124..828"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: added 353 bases not found in
                     genome assembly"
                     /db_xref="GeneID:107940778"
ORIGIN      
        1 madqltdeqi sefkeafslf dkdgdgcitt kelgtvmrsl gqnpteaelq dminevdadg
       61 ngtidfpefl nlmarkmkdt dseeelkeaf rvfdkdqngf isaaelrhvm tnlgeklkda
      121 efnerfkhrp pkaldedete fldklemsrr eyerqvadee aeqlrsfqaa vaaqsnvvle
      181 lketppvlan qeqktvgkkn patrplgmli kvkatskkgk nraggklisg tkat
//
LOCUS       XP_016729718             688 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase TOUSLED isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016729718
VERSION     XP_016729718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874229.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..688
                     /product="serine/threonine-protein kinase TOUSLED isoform
                     X1"
                     /calculated_mol_wt=78249
     Region          <207..>462
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          409..682
                     /region_name="STKc_TLK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Tousled-Like Kinase; cd13990"
                     /db_xref="CDD:270892"
     Site            order(416..420,424,437,439,475,492..495,499,501,540,542,
                     544..545,547,558,561,582..585)
                     /site_type="active"
                     /db_xref="CDD:270892"
     Site            order(416..420,424,437,439,475,492..495,499,540,542,
                     544..545,547,558)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270892"
     Site            order(420,499,501,540,542,544,561,582..585)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270892"
     Site            order(557..569,572..585)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270892"
     CDS             1..688
                     /gene="LOC107940779"
                     /coded_by="XM_016874229.2:302..2368"
                     /db_xref="GeneID:107940779"
ORIGIN      
        1 msddmllhfs snssnqsdns lptkmaklea rlvgkvssat gsqqppqtqq llqqqqpvwa
       61 slssaskfvs aedlseasss sdsddengge fliqantskr qkiqgdgnlp vfehveaate
      121 gtqkivepme skassegnrr kqgrgrghsi ssrgrgsran dqtkqmssst vtpsngqlen
      181 sfhkdkpkeq frtdqrtsle eevtslrakv saleedlrkc rqeasdyqnl crqlekelkd
      241 ikdydqqmkp krikmisdll iavskaerqe armkvrqdsl rlgnvgvira gtvisetwed
      301 gqalkdlnah lrqlleakea verqrkqlkk rqsdkgdasd aesstqeedi liqdeiyksr
      361 lasikreees llrerdryel dkgrliremk rirdedgsrf nnfqilnnry allnllgkgg
      421 fsevykaydl vehryvackl hglnaqwsed kkqsyirhai reynihktlv hhhivrlwdi
      481 feidqntfct vleycsgkdl davlkatpvl pekeariiiv qifqglvyln kraqkiihyd
      541 lkpgnvlfde lgvakvtdfg lskiveddvg sqgmeltsqg agtywylppe cfelsrtpli
      601 sskvdvwsag vllyqmlfgk rpfghdqtqe rilredtiik arkvefpsrp tvsneakdli
      661 rrcltynqae rpdvltiaqd pyltyskk
//
LOCUS       XP_040941830             683 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase TOUSLED isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941830
VERSION     XP_040941830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085896.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..683
                     /product="serine/threonine-protein kinase TOUSLED isoform
                     X2"
                     /calculated_mol_wt=77636
     Region          <202..>457
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          404..677
                     /region_name="STKc_TLK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Tousled-Like Kinase; cd13990"
                     /db_xref="CDD:270892"
     Site            order(411..415,419,432,434,470,487..490,494,496,535,537,
                     539..540,542,553,556,577..580)
                     /site_type="active"
                     /db_xref="CDD:270892"
     Site            order(411..415,419,432,434,470,487..490,494,535,537,
                     539..540,542,553)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270892"
     Site            order(415,494,496,535,537,539,556,577..580)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270892"
     Site            order(552..564,567..580)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270892"
     CDS             1..683
                     /gene="LOC107940779"
                     /coded_by="XM_041085896.1:302..2353"
                     /db_xref="GeneID:107940779"
ORIGIN      
        1 msddmllhfs snssnqsdns lptkmaklea rlvgkvssat gsqqppqtqq llqqqqpvwa
       61 slssaskfvs aedlseasss sdsddengge fliqantskr qkiqgdgnlp vfehveaate
      121 gtqkivepme skassegnrr kqgrgrghsi ssrgrgsran dqtkqmssst vtpsngqled
      181 kpkeqfrtdq rtsleeevts lrakvsalee dlrkcrqeas dyqnlcrqle kelkdikdyd
      241 qqmkpkrikm isdlliavsk aerqearmkv rqdslrlgnv gviragtvis etwedgqalk
      301 dlnahlrqll eakeaverqr kqlkkrqsdk gdasdaesst qeediliqde iyksrlasik
      361 reeesllrer dryeldkgrl iremkrirde dgsrfnnfqi lnnryallnl lgkggfsevy
      421 kaydlvehry vacklhglna qwsedkkqsy irhaireyni hktlvhhhiv rlwdifeidq
      481 ntfctvleyc sgkdldavlk atpvlpekea riiivqifqg lvylnkraqk iihydlkpgn
      541 vlfdelgvak vtdfglskiv eddvgsqgme ltsqgagtyw ylppecfels rtplisskvd
      601 vwsagvllyq mlfgkrpfgh dqtqerilre dtiikarkve fpsrptvsne akdlirrclt
      661 ynqaerpdvl tiaqdpylty skk
//
LOCUS       XP_016729715             358 aa            linear   PLN 06-AUG-2024
DEFINITION  apoptosis-inducing factor homolog A [Gossypium hirsutum].
ACCESSION   XP_016729715
VERSION     XP_016729715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="apoptosis-inducing factor homolog A"
                     /calculated_mol_wt=38973
     Region          22..341
                     /region_name="Ndh"
                     /note="NADH dehydrogenase, FAD-containing subunit [Energy
                     production and conversion]; COG1252"
                     /db_xref="CDD:440864"
     CDS             1..358
                     /gene="LOC107940777"
                     /coded_by="XM_016874226.2:252..1328"
                     /db_xref="GeneID:107940777"
ORIGIN      
        1 mesggskrrv vvvgggiags ilarsiqfna dltiidpkey leikwaqlrs kvepsfaera
       61 vvnyrdfftn grivtstain itenevltad grhigydflv iatghsdnvp vtrterlhyy
      121 daenqkiqsa rsilivgggp sgvelageis tdfpdkkvtl vhkgprlley igpkasdkgl
      181 sllrskkvdi klqqsvdlks asdgsqvyrt stgesikadc hflctrvpls tawlnetilk
      241 tnldkdgrlm vdeylrvkgr nnifaigdit dvpelklgha aihhaylvak nlkllmgggk
      301 eskmsvykpg pevamvslgr khavaqfpfa tlggripgli ksgdvfvgrt rkhlglep
//
LOCUS       XP_016729719            1027 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016729719
VERSION     XP_016729719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1027
                     /product="serine/threonine-protein kinase Nek5 isoform X1"
                     /calculated_mol_wt=112203
     Region          7..262
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(14..18,22,35,37,68,85..88,92,94,133,135,137..138,
                     140,151,154,156,169..172)
                     /site_type="active"
                     /db_xref="CDD:270855"
     Site            order(14..15,17..18,22,35,37,68,86..88,92,138,140,156)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270855"
     Site            order(18,92,94,133,135,137,154,169..172)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(150..159,165..172)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..1027
                     /gene="LOC107940780"
                     /coded_by="XM_016874230.2:406..3489"
                     /db_xref="GeneID:107940780"
ORIGIN      
        1 mesrmdhyei meqigrgafg aailvhhkse kkkyvlkkir larqtercrr sahqemalia
       61 rvqhpyivef keawvekgcy vcivtgyceg gdmaelmkks ngvyfpeekl ckwfaqllla
      121 veylhsnfvl hrdlkcsnif ltkdqdvrlg dfglaktlka ddlassvvgt pnymcpella
      181 dipygfksdi wslgcciyem aahrpafkaf dmsgliskin rssigplpsc yspslktlik
      241 gmlrknpehr psasellkhp ylqpyvdhyr psfscptncs pdkhissgrd nrknmaesqn
      301 snsscsdkds lpssdrntgt mvsnsnskat dtdsisndde egtephppre eengpvifsg
      361 kvdengtrtp syaeqgsnvq skqpktiksi mmalkegkvr engspmrgsr akavggstqr
      421 nnveaspkvl kppastpvsk snadtmtsas vklpldsarr ipgshhlklq splfefspkt
      481 kprhegippp vpgkhvaedg lssnsrlrtp psnvarissv mgrmkhggtd asdgalnmpk
      541 lgsteinpgr eaipcqlpch tnvsmevtqe veiaptgack gvqtdrnnpv sssisiqefe
      601 icddattsfi dmteqthdhe ittgikslel hpassspdsl qskiperesl ghdhksvmcs
      661 teepvptqdl lhfasanekv glsapldlpv lnseeisvhk dassvsrtvs tddaplsrts
      721 srdvsisrli srddapssrp ssrddapiir lgtgedalvs gqttgedcqi sissndtmlh
      781 sdetvasrpc srhdtmlhln lsstssgdgk ftvmelfssm vdstsciasp issiqnnsqp
      841 dketnpttts rpqacdnvih virhssfrvg neqpvmekvd tgvqnvdvgk linvvrdesd
      901 trnvtspmtl rssnvpdypg ikemdvrnsi ssspkldspd ptkpsssltd eetpaketld
      961 iksfrqraea legllelsae llqqnrleel svvlkpfgkh kvspretaiw lakslkglmi
     1021 edsgrss
//
LOCUS       XP_040941831             872 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941831
VERSION     XP_040941831.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085897.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..872
                     /product="serine/threonine-protein kinase Nek5 isoform X2"
                     /calculated_mol_wt=94495
     Region          <40..107
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          115..>393
                     /region_name="MSS4"
                     /note="Phosphatidylinositol-4-phosphate 5-kinase [Signal
                     transduction mechanisms]; COG5253"
                     /db_xref="CDD:227578"
     CDS             1..872
                     /gene="LOC107940780"
                     /coded_by="XM_041085897.1:204..2822"
                     /db_xref="GeneID:107940780"
ORIGIN      
        1 miwllrwlel pitcvlnclq ifltvsslis glwvcllmsc ciyemaahrp afkafdmsgl
       61 iskinrssig plpscyspsl ktlikgmlrk npehrpsase llkhpylqpy vdhyrpsfsc
      121 ptncspdkhi ssgrdnrknm aesqnsnssc sdkdslpssd rntgtmvsns nskatdtdsi
      181 snddeegtep hppreeengp vifsgkvden gtrtpsyaeq gsnvqskqpk tiksimmalk
      241 egkvrengsp mrgsrakavg gstqrnnvea spkvlkppas tpvsksnadt mtsasvklpl
      301 dsarripgsh hlklqsplfe fspktkprhe gipppvpgkh vaedglssns rlrtppsnva
      361 rissvmgrmk hggtdasdga lnmpklgste inpgreaipc qlpchtnvsm evtqeveiap
      421 tgackgvqtd rnnpvsssis iqefeicdda ttsfidmteq thdheittgi kslelhpass
      481 spdslqskip ereslghdhk svmcsteepv ptqdllhfas anekvglsap ldlpvlnsee
      541 isvhkdassv srtvstddap lsrtssrdvs isrlisrdda pssrpssrdd apiirlgtge
      601 dalvsgqttg edcqisissn dtmlhsdetv asrpcsrhdt mlhlnlssts sgdgkftvme
      661 lfssmvdsts ciaspissiq nnsqpdketn ptttsrpqac dnvihvirhs sfrvgneqpv
      721 mekvdtgvqn vdvgklinvv rdesdtrnvt spmtlrssnv pdypgikemd vrnsissspk
      781 ldspdptkps ssltdeetpa ketldiksfr qraealegll elsaellqqn rleelsvvlk
      841 pfgkhkvspr etaiwlaksl kglmiedsgr ss
//
LOCUS       XP_040941832             865 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek5 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040941832
VERSION     XP_040941832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085898.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..865
                     /product="serine/threonine-protein kinase Nek5 isoform X3"
                     /calculated_mol_wt=93538
     Region          <5..100
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          108..>386
                     /region_name="MSS4"
                     /note="Phosphatidylinositol-4-phosphate 5-kinase [Signal
                     transduction mechanisms]; COG5253"
                     /db_xref="CDD:227578"
     CDS             1..865
                     /gene="LOC107940780"
                     /coded_by="XM_041085898.1:243..2840"
                     /db_xref="GeneID:107940780"
ORIGIN      
        1 myalvvgtpn ymcpelladi pygfksdiws lgcciyemaa hrpafkafdm sgliskinrs
       61 sigplpscys pslktlikgm lrknpehrps asellkhpyl qpyvdhyrps fscptncspd
      121 khissgrdnr knmaesqnsn sscsdkdslp ssdrntgtmv snsnskatdt dsisnddeeg
      181 tephppreee ngpvifsgkv dengtrtpsy aeqgsnvqsk qpktiksimm alkegkvren
      241 gspmrgsrak avggstqrnn veaspkvlkp pastpvsksn adtmtsasvk lpldsarrip
      301 gshhlklqsp lfefspktkp rhegipppvp gkhvaedgls snsrlrtpps nvarissvmg
      361 rmkhggtdas dgalnmpklg steinpgrea ipcqlpchtn vsmevtqeve iaptgackgv
      421 qtdrnnpvss sisiqefeic ddattsfidm teqthdheit tgikslelhp assspdslqs
      481 kipereslgh dhksvmcste epvptqdllh fasanekvgl sapldlpvln seeisvhkda
      541 ssvsrtvstd daplsrtssr dvsisrlisr ddapssrpss rddapiirlg tgedalvsgq
      601 ttgedcqisi ssndtmlhsd etvasrpcsr hdtmlhlnls stssgdgkft vmelfssmvd
      661 stsciaspis siqnnsqpdk etnptttsrp qacdnvihvi rhssfrvgne qpvmekvdtg
      721 vqnvdvgkli nvvrdesdtr nvtspmtlrs snvpdypgik emdvrnsiss spkldspdpt
      781 kpsssltdee tpaketldik sfrqraeale gllelsaell qqnrleelsv vlkpfgkhkv
      841 spretaiwla kslkglmied sgrss
//
LOCUS       XP_016729713             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729713
VERSION     XP_016729713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..292
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33608
     CDS             1..292
                     /gene="LOC107940774"
                     /coded_by="XM_016874224.2:256..1134"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlsdfep
      181 epesdikdle eedlseddll ddygsscrye gydgfdasgk rwyevslvdd knqdyhkall
      241 ldvlkwdsck siywykanhl fearmseeea dkvagleeve yveprryime ln
//
LOCUS       XP_040941833             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941833
VERSION     XP_040941833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085899.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..292
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33608
     CDS             1..292
                     /gene="LOC107940774"
                     /coded_by="XM_041085899.1:602..1480"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlsdfep
      181 epesdikdle eedlseddll ddygsscrye gydgfdasgk rwyevslvdd knqdyhkall
      241 ldvlkwdsck siywykanhl fearmseeea dkvagleeve yveprryime ln
//
LOCUS       XP_016729712             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729712
VERSION     XP_016729712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..292
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33608
     CDS             1..292
                     /gene="LOC107940774"
                     /coded_by="XM_016874223.2:642..1520"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlsdfep
      181 epesdikdle eedlseddll ddygsscrye gydgfdasgk rwyevslvdd knqdyhkall
      241 ldvlkwdsck siywykanhl fearmseeea dkvagleeve yveprryime ln
//
LOCUS       XP_040941834             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941834
VERSION     XP_040941834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085900.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..292
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33608
     CDS             1..292
                     /gene="LOC107940774"
                     /coded_by="XM_041085900.1:624..1502"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlsdfep
      181 epesdikdle eedlseddll ddygsscrye gydgfdasgk rwyevslvdd knqdyhkall
      241 ldvlkwdsck siywykanhl fearmseeea dkvagleeve yveprryime ln
//
LOCUS       XP_040941835             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941835
VERSION     XP_040941835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085901.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..292
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33608
     CDS             1..292
                     /gene="LOC107940774"
                     /coded_by="XM_041085901.1:587..1465"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlsdfep
      181 epesdikdle eedlseddll ddygsscrye gydgfdasgk rwyevslvdd knqdyhkall
      241 ldvlkwdsck siywykanhl fearmseeea dkvagleeve yveprryime ln
//
LOCUS       XP_040941836             275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941836
VERSION     XP_040941836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085902.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=31502
     CDS             1..275
                     /gene="LOC107940774"
                     /coded_by="XM_041085902.1:273..1100"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlsdfep
      181 epesdikdle eedlseddll ddygsscrye gydgfdasgk rwyevslvdd knqdyhkall
      241 ldvlkwdsck siywykanhl fearmseeea dkvad
//
LOCUS       XP_040941837             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941837
VERSION     XP_040941837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085903.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=31390
     CDS             1..273
                     /gene="LOC107940774"
                     /coded_by="XM_041085903.1:272..1093"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkqpecnkge gegegedkel eeddisqdsd cfsslsnskp whfvrlektc qrneqvalll
       61 kvlkcdksvi psiyefrsll sfhayltlde aenlseleev eeiglpsmsv larkakrirs
      121 ltsngllkak kqktsmrsil cwqaafsrsg dktkrngdfe pepesdikdl eeedlseddl
      181 lddygsscry egydgfdasg krwyevslvd dknqdyhkal lldvlkwdsc ksiywykanh
      241 lfearmseee adkvagleev eyveprryim eln
//
LOCUS       XP_016729714             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729714
VERSION     XP_016729714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=31549
     CDS             1..273
                     /gene="LOC107940774"
                     /coded_by="XM_016874225.2:141..962"
                     /db_xref="GeneID:107940774"
ORIGIN      
        1 mkeddisqds dcfsslsnsk pwhfvrlekt cqrneqvall lkvlkcdksv ipsiyefrsl
       61 lsfhayltld eaenlselee veeiglpsms vlarkakrir sltsngllka kkqktsmrsi
      121 lcwqaafsrs gdktkrngdf epepesdikd leeedlsdfe pepesdikdl eeedlseddl
      181 lddygsscry egydgfdasg krwyevslvd dknqdyhkal lldvlkwdsc ksiywykanh
      241 lfearmseee adkvagleev eyveprryim eln
//
LOCUS       XP_016729711             126 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor OFP6 [Gossypium hirsutum].
ACCESSION   XP_016729711
VERSION     XP_016729711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..126
                     /product="transcription repressor OFP6"
                     /calculated_mol_wt=14122
     Region          65..118
                     /region_name="Ovate"
                     /note="Transcriptional repressor, ovate; pfam04844"
                     /db_xref="CDD:461454"
     CDS             1..126
                     /gene="LOC107940773"
                     /coded_by="XM_016874222.2:114..494"
                     /db_xref="GeneID:107940773"
ORIGIN      
        1 mqdvgvkngh vhepklkvsp ppppppssps pasnfnmdti sssspssnvm vnpkimdsia
       61 vvkdshdpyl dfrhsmlqmi eekhiysade lqelfqcfle lnspchhrvi veafmgiwhr
      121 klceyv
//
LOCUS       XP_016730304             269 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016730304
VERSION     XP_016730304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874815.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..269
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=30260
     CDS             1..269
                     /gene="LOC107941258"
                     /coded_by="XM_016874815.2:255..1064"
                     /db_xref="GeneID:107941258"
ORIGIN      
        1 mksiqanntf flprtngsnp rkpellfpsy pylvcfnakv pvtkkliass slcsqqfapl
       61 lkhkrcisvs kcrqgttvck fggqdepagd negspwksie kaignfgkkq siedvlrqqi
      121 ekqdyydegs gqnpprgggg ggssggdgfg esedeglsgi ldetvqvila tlgfiflyvy
      181 iingeelarl akdyikylfg gsksvrlkrt mykwskffek ltekkeydkf wlekaiittp
      241 twydspdkyr rvlnsyieyd dedesdydd
//
LOCUS       XP_016730305             180 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016730305
VERSION     XP_016730305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874816.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..180
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19265
     CDS             1..180
                     /gene="LOC107941258"
                     /coded_by="XM_016874816.2:220..762"
                     /db_xref="GeneID:107941258"
ORIGIN      
        1 mksiqanntf flprtngsnp rkpellfpsy pylvcfnakv pvtkkliass slcsqqfapl
       61 lkhkrcisvs kcrqgttvck fggqdepagd negspwksie kaignfgkkq siedvlrqqi
      121 ekqdyydegs gqnpprgggg ggssggdgfg esedeglsgi ldetvqvila tlgfifllvt
//
LOCUS       XP_016730317             990 aa            linear   PLN 06-AUG-2024
DEFINITION  110 kDa U5 small nuclear ribonucleoprotein component CLO [Gossypium
            hirsutum].
ACCESSION   XP_016730317
VERSION     XP_016730317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874828.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..990
                     /product="110 kDa U5 small nuclear ribonucleoprotein
                     component CLO"
                     /calculated_mol_wt=110311
     Region          4..121
                     /region_name="EFTUD2"
                     /note="116 kDa U5 small nuclear ribonucleoprotein
                     component N-terminus; pfam16004"
                     /db_xref="CDD:464968"
     Region          134..971
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..990
                     /gene="LOC107941271"
                     /coded_by="XM_016874828.2:137..3109"
                     /db_xref="GeneID:107941271"
ORIGIN      
        1 mddnlydefg nyigpdiesd qgsegeeeed eelpdrhvqe egeqsdgeap dgvsngwita
       61 andvdmdnqi vlaedkkyyp taeevygedv etlvmdedeq pleqpiikpv knikfevgvk
      121 dsstyvstqf liglmsnpgl irnvalvghl qhgktvfmdm lveqthhmnt fdqnsekhmr
      181 ytdtrideqe rrisikaipm slvledsngk sylcnimdtp ghvnfsdemt aalrladgav
      241 livdaaegvm vnterairha iqeripivvv inkvdrlite lklppkdayh klrhtlevin
      301 nhisaastta gnvpvidpaa gnvcfasasa gwsftlqsfa klyvklhgip fdaekfasrl
      361 wgdiyyhpdt rafkrkppag ggersfvefv leplykiysq vigehrksve stlaelgvtl
      421 snaayklnvr pllrlacstv fgsasgftdl lvqhipspkd aaakkvdhty tgpkhstiyk
      481 amvecdpsgp lmvnvtklyp ksdcsvfdaf grvysgriqt gqslrvlgeg yspddeedmt
      541 ikevtklwiy qaryripiss appgswvlie gvdasimkta tlcnmdlded vyifrplqfn
      601 tlpvvktate plnpselpkm veglrkisks yplaitkvee sgehtilgtg elyldsimkd
      661 lrelysevev kvadpvvsfc etvvesssmk cfaetpnkkn kitmiaeple rglaedieng
      721 vvsvdwsrkq lgdffktkyd wdllaarsiw afgpdkqgpn illddtlpte vdkgllgsvr
      781 dsivqgfqwg aregplcdep irnvkfkivd ariaseplhr gsgqiiptar rvaysaflma
      841 tprlmepvyy veiqtpidcv saiytvlsrr rghvtadvpq pgtpayivka flpviesfgf
      901 etdlryhtqg qafclsvfdh waivpgdpld ksivlrplep apiqhlaref mvktrrrkgm
      961 sedvsinkff deamvvelaq qaadlhqqmi
//
LOCUS       XP_016730316             990 aa            linear   PLN 06-AUG-2024
DEFINITION  110 kDa U5 small nuclear ribonucleoprotein component CLO [Gossypium
            hirsutum].
ACCESSION   XP_016730316
VERSION     XP_016730316.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874827.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..990
                     /product="110 kDa U5 small nuclear ribonucleoprotein
                     component CLO"
                     /calculated_mol_wt=110311
     Region          4..121
                     /region_name="EFTUD2"
                     /note="116 kDa U5 small nuclear ribonucleoprotein
                     component N-terminus; pfam16004"
                     /db_xref="CDD:464968"
     Region          134..971
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..990
                     /gene="LOC107941271"
                     /coded_by="XM_016874827.2:160..3132"
                     /db_xref="GeneID:107941271"
ORIGIN      
        1 mddnlydefg nyigpdiesd qgsegeeeed eelpdrhvqe egeqsdgeap dgvsngwita
       61 andvdmdnqi vlaedkkyyp taeevygedv etlvmdedeq pleqpiikpv knikfevgvk
      121 dsstyvstqf liglmsnpgl irnvalvghl qhgktvfmdm lveqthhmnt fdqnsekhmr
      181 ytdtrideqe rrisikaipm slvledsngk sylcnimdtp ghvnfsdemt aalrladgav
      241 livdaaegvm vnterairha iqeripivvv inkvdrlite lklppkdayh klrhtlevin
      301 nhisaastta gnvpvidpaa gnvcfasasa gwsftlqsfa klyvklhgip fdaekfasrl
      361 wgdiyyhpdt rafkrkppag ggersfvefv leplykiysq vigehrksve stlaelgvtl
      421 snaayklnvr pllrlacstv fgsasgftdl lvqhipspkd aaakkvdhty tgpkhstiyk
      481 amvecdpsgp lmvnvtklyp ksdcsvfdaf grvysgriqt gqslrvlgeg yspddeedmt
      541 ikevtklwiy qaryripiss appgswvlie gvdasimkta tlcnmdlded vyifrplqfn
      601 tlpvvktate plnpselpkm veglrkisks yplaitkvee sgehtilgtg elyldsimkd
      661 lrelysevev kvadpvvsfc etvvesssmk cfaetpnkkn kitmiaeple rglaedieng
      721 vvsvdwsrkq lgdffktkyd wdllaarsiw afgpdkqgpn illddtlpte vdkgllgsvr
      781 dsivqgfqwg aregplcdep irnvkfkivd ariaseplhr gsgqiiptar rvaysaflma
      841 tprlmepvyy veiqtpidcv saiytvlsrr rghvtadvpq pgtpayivka flpviesfgf
      901 etdlryhtqg qafclsvfdh waivpgdpld ksivlrplep apiqhlaref mvktrrrkgm
      961 sedvsinkff deamvvelaq qaadlhqqmi
//
LOCUS       XP_016730323             196 aa            linear   PLN 06-AUG-2024
DEFINITION  ferredoxin-3, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016730323
VERSION     XP_016730323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874834.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..196
                     /product="ferredoxin-3, chloroplastic isoform X1"
                     /calculated_mol_wt=21769
     Region          96..192
                     /region_name="fdx_plant"
                     /note="ferredoxin [2Fe-2S]; TIGR02008"
                     /db_xref="CDD:273926"
     Site            order(131..132,135,138,140..143,172..173)
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:238126"
     Site            order(135,140,143,173)
                     /site_type="other"
                     /note="iron binding site [ion binding]"
                     /db_xref="CDD:238126"
     CDS             1..196
                     /gene="LOC107941275"
                     /coded_by="XM_016874834.2:20..610"
                     /db_xref="GeneID:107941275"
ORIGIN      
        1 mqavwnlrts kwkkstkfct ffkfsdphlp rvkpqrrkkt kmttvrslts psivkaptpn
       61 rftspivrap tslgsvktis rsfglkcssn qrtsmamyki klvgpngeen efevpdnqyi
      121 leaaeaagve lpyccragac sictakvvsg tvhqpeaiyl eddqikdgym ltcvskptsd
      181 ceihthkeld lyspsk
//
LOCUS       XP_016730324             155 aa            linear   PLN 06-AUG-2024
DEFINITION  ferredoxin, root R-B2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016730324
VERSION     XP_016730324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874835.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..155
                     /product="ferredoxin, root R-B2 isoform X2"
                     /calculated_mol_wt=16720
     Region          55..151
                     /region_name="fdx_plant"
                     /note="ferredoxin [2Fe-2S]; TIGR02008"
                     /db_xref="CDD:273926"
     Site            order(90..91,94,97,99..102,131..132)
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:238126"
     Site            order(94,99,102,132)
                     /site_type="other"
                     /note="iron binding site [ion binding]"
                     /db_xref="CDD:238126"
     CDS             1..155
                     /gene="LOC107941275"
                     /coded_by="XM_016874835.2:283..750"
                     /db_xref="GeneID:107941275"
ORIGIN      
        1 mttvrsltsp sivkaptpnr ftspivrapt slgsvktisr sfglkcssnq rtsmamykik
       61 lvgpngeene fevpdnqyil eaaeaagvel pyccragacs ictakvvsgt vhqpeaiyle
      121 ddqikdgyml tcvskptsdc eihthkeldl yspsk
//
LOCUS       XP_040941838             113 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941838
VERSION     XP_040941838.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085904.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12401
     CDS             1..113
                     /gene="LOC121212667"
                     /coded_by="XM_041085904.1:59..400"
                     /db_xref="GeneID:121212667"
ORIGIN      
        1 mdcqccssgi geclcgrmmk enkmlqlhmk pptsstsssl actflslsgn petignanng
       61 lifmmkttll spttlialhe ksldwkvyle dishcdgnll elwykescii syl
//
LOCUS       XP_040941839             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941839
VERSION     XP_040941839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085905.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=20008
     CDS             1..176
                     /gene="LOC121212669"
                     /coded_by="XM_041085905.1:81..611"
                     /db_xref="GeneID:121212669"
ORIGIN      
        1 mrmslkiatd fkaqewvlqk rendrsplnl fecwgfqfne nerhcfftgr fllkplpiyi
       61 aeamdcqccs sgigeclcgr mmkenkmlql hmkpptssts sslactflsl sgnpetigna
      121 nnglifmmkt tllspttlia lheksldwkv yledishcdg nllelwykes ciisyl
//
LOCUS       XP_040941840             169 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941840
VERSION     XP_040941840.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085906.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..169
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19226
     CDS             1..169
                     /gene="LOC121212669"
                     /coded_by="XM_041085906.1:97..606"
                     /db_xref="GeneID:121212669"
ORIGIN      
        1 mrmslkiatd fkaqewvlqk rendrsplnl fecwgfqfne nerhcfftgr fllkplpiyi
       61 aeamdcqccs sgigeclcgr mmkenkmlql hmkpptssts sslactflsl sgnpetigna
      121 nnglifmmkt tllspttlia lheksldwkv yllsssmtyk atrewlrec
//
LOCUS       XP_016730318             364 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016730318
VERSION     XP_016730318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874829.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..364
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 1"
                     /calculated_mol_wt=40306
     Region          281..328
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Region          282..328
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(285..286,288..290,292..297,299..301)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Site            order(300,303..304,307..308,310..311,314..315,317..318,
                     321..322,324..325,328)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..364
                     /gene="LOC107941272"
                     /coded_by="XM_016874829.2:194..1288"
                     /db_xref="GeneID:107941272"
ORIGIN      
        1 malsesesva yggikktgsp tqapesphee stpdrsnssp nkqnsifslt ldeiqlksgk
       61 tfgsmnmdef lanlwnveen qqvlsqpepi dgdkgmgcqp slarqgsfsv ptplckktvd
      121 evwfeiqkel pqpreandva dheppqrqqt lgeitledfl ikagvvqeps gssqqnkasp
      181 iringaslda nyimdapirn nnasmdanfg mghmiglgfp ghqivsngya agysilaqtv
      241 mgessngten gnrtnsllqp avapqnkkri vdgppevvve rrqrrmiknr esaarsrarr
      301 qaytvelele lnqlkqenak lkqlveendk rrkeevlkrk keltcakkkv dkmmtlrrtv
      361 sfgw
//
LOCUS       XP_016730320             216 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L10a [Gossypium hirsutum].
ACCESSION   XP_016730320
VERSION     XP_016730320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874831.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="60S ribosomal protein L10a"
                     /calculated_mol_wt=24372
     Region          1..216
                     /region_name="PTZ00029"
                     /note="60S ribosomal protein L10a; Provisional"
                     /db_xref="CDD:185405"
     Site            order(25..27,30,32,34,36,161,163,165,209..210,212)
                     /site_type="other"
                     /note="mRNA/rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238235"
     CDS             1..216
                     /gene="LOC107941273"
                     /coded_by="XM_016874831.2:145..795"
                     /db_xref="GeneID:107941273"
ORIGIN      
        1 msklqsdalr eaistivans keknrkftet ielqiglkny dpqkdkrfsg svklphiprp
       61 kmkicmlgda qhveeaekig ldymdvealk klnknkklvk klakkyhafl asesvikqip
      121 rllgpglnka gkfptlvthq esleskvnet kamvkfqlkk vlcmgvavgn vameekqifq
      181 nvqmsvnflv sllkknwqnv rclylkstmg psnrif
//
LOCUS       XP_016730307             154 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger A20 and AN1 domain-containing stress-associated protein
            3 [Gossypium hirsutum].
ACCESSION   XP_016730307
VERSION     XP_016730307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874818.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..154
                     /product="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 3"
                     /calculated_mol_wt=16565
     Region          11..34
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          95..132
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..154
                     /gene="LOC107941260"
                     /coded_by="XM_016874818.2:203..667"
                     /db_xref="GeneID:107941260"
ORIGIN      
        1 maeehrcqap klcanncgli gspatqnlcs kchrdlqlkq hrsssakhav nqtsipspss
       61 fpsvsssssa dkdggslaet kaaevvevev rpkrclscnk rvgltgfkcr cgmvfcgihr
      121 ypeehgckfd fkamgkqqia qanpvvkaik lhki
//
LOCUS       XP_016730313             155 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine-containing phosphotransfer protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016730313
VERSION     XP_016730313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874824.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..155
                     /product="histidine-containing phosphotransfer protein 1"
                     /calculated_mol_wt=17473
     Region          44..138
                     /region_name="HPT"
                     /note="Histidine Phosphotransfer domain, involved in
                     signalling through a two part component systems in which
                     an autophosphorylating histidine protein kinase serves as
                     a phosphoryl donor to a response regulator protein; the
                     response regulator protein is...; cd00088"
                     /db_xref="CDD:238041"
     Site            order(81,84..85,100,103)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238041"
     Site            81
                     /site_type="active"
                     /db_xref="CDD:238041"
     CDS             1..155
                     /gene="LOC107941268"
                     /coded_by="XM_016874824.2:104..571"
                     /db_xref="GeneID:107941268"
ORIGIN      
        1 maasstdptq qlndyirtmh dqgilddnfd qllalrreqn prfinelism ftndaeayia
       61 eitnalslte vdfstiiskl hqlkgstsgi gghrmyqacc elrvaaddgd kgrcdelflr
      121 vkeefntlkq cldsisqmrs niisngtrsr rrrpl
//
LOCUS       XP_016730321            1037 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein RAD5A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016730321
VERSION     XP_016730321.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874832.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1037
                     /product="DNA repair protein RAD5A isoform X1"
                     /calculated_mol_wt=115387
     Region          10..49
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          121..228
                     /region_name="HIRAN"
                     /note="HIRAN domain; pfam08797"
                     /db_xref="CDD:400928"
     Region          <346..1019
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          792..855
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(802,805,817,819,822,825,838,841)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438261"
     CDS             1..1037
                     /gene="LOC107941274"
                     /coded_by="XM_016874832.2:231..3344"
                     /db_xref="GeneID:107941274"
ORIGIN      
        1 mggnkvsedl istvrlivgs dysemdiira lhlakhdata ainiifdspr sfkprekqie
       61 pesepvvris ssdistvsvk pkktgkenkd fsfssngnva cggndledeg nvrlendwgf
      121 vgssevpgls tskgrkikvg eevsftfplk gtgsspagsm gkgfgkgraa aacseivrfs
      181 tknfgeigri pnewarcllp lvrdkkirve grcksapdvl gvmdtvllll svyinssmfh
      241 kyqqtslkaa sncndesivh plpslfrllg ltpfkkaela pgdlytkkrp letkdgsgih
      301 tplltankfk npsqngneve ndesisdadl enivgvgdns eleemdppst lqcelrpyqk
      361 qalqwmfqve kgncmdeaat tlhpcweayr ladrrdpviy lnaftgdati efpsthqmar
      421 ggiladamgl gktimtisll athserggls dsqssdqpsd qggeaidvfs qspnsvktat
      481 kfpgfdklsk qrnklanggn liicpmtllg qwkaeiethv qpgslslyvh ygqsrpkdak
      541 llaqndvvit tygvlasefs aensednggl ysvrwfrivl deahtikssk sqismaaaal
      601 vadrrwcltg tpiqnkledl ysllrflkve pwgnwpwwnk liqkpfeegd qrglklvqsi
      661 lkpimlrrtk cstdrygkpi lvlppadvqv iycelseaek dfyealfkrs kvkfdqfveq
      721 grvlhnyasi lelllrlrqc cdhpflvmsr gdtqeytdln klakrflrgg qstldgeakd
      781 lpsrayvqev veelrkgeqg ecpicleafe davltpcahr lcrecllasw rnpnsglcpv
      841 crktvtkqel itaptesrfq vdveknwves tkvvvllqel enlrssgskc ilfsqwtafl
      901 dllqiplsrn nipflrldgt lnqqqrekvi kqfsedskim vllmslkagg vginltaasn
      961 afvldpwwnp aveeqavmri hrigqtkrva ikrfivkgtv eermeavqar kqkmisgalt
     1021 deevrtarle elkmlft
//
LOCUS       XP_016730322             840 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein RAD5A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016730322
VERSION     XP_016730322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..840
                     /product="DNA repair protein RAD5A isoform X2"
                     /calculated_mol_wt=92903
     Region          10..49
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          121..228
                     /region_name="HIRAN"
                     /note="HIRAN domain; pfam08797"
                     /db_xref="CDD:400928"
     Region          355..668
                     /region_name="DEXDc_SHPRH-like"
                     /note="DEXH-box helicase domain of SHPRH-like proteins;
                     cd18008"
                     /db_xref="CDD:350766"
     Site            order(428..434,515,581..582)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350766"
     Region          801..840
                     /region_name="RING-HC"
                     /note="HC subclass of RING (RING-HC) finger and its
                     variants; cd16449"
                     /db_xref="CDD:438113"
     CDS             1..840
                     /gene="LOC107941274"
                     /coded_by="XM_016874833.2:231..2753"
                     /db_xref="GeneID:107941274"
ORIGIN      
        1 mggnkvsedl istvrlivgs dysemdiira lhlakhdata ainiifdspr sfkprekqie
       61 pesepvvris ssdistvsvk pkktgkenkd fsfssngnva cggndledeg nvrlendwgf
      121 vgssevpgls tskgrkikvg eevsftfplk gtgsspagsm gkgfgkgraa aacseivrfs
      181 tknfgeigri pnewarcllp lvrdkkirve grcksapdvl gvmdtvllll svyinssmfh
      241 kyqqtslkaa sncndesivh plpslfrllg ltpfkkaela pgdlytkkrp letkdgsgih
      301 tplltankfk npsqngneve ndesisdadl enivgvgdns eleemdppst lqcelrpyqk
      361 qalqwmfqve kgncmdeaat tlhpcweayr ladrrdpviy lnaftgdati efpsthqmar
      421 ggiladamgl gktimtisll athserggls dsqssdqpsd qggeaidvfs qspnsvktat
      481 kfpgfdklsk qrnklanggn liicpmtllg qwkaeiethv qpgslslyvh ygqsrpkdak
      541 llaqndvvit tygvlasefs aensednggl ysvrwfrivl deahtikssk sqismaaaal
      601 vadrrwcltg tpiqnkledl ysllrflkve pwgnwpwwnk liqkpfeegd qrglklvqsi
      661 lkpimlrrtk cstdrygkpi lvlppadvqv iycelseaek dfyealfkrs kvkfdqfveq
      721 grvlhnyasi lelllrlrqc cdhpflvmsr gdtqeytdln klakrflrgg qstldgeakd
      781 lpsrayvqev veelrkgeqg ecpicleafe davltpcahr lcrecllasw rnpnsglcpv
//
LOCUS       XP_016730314             415 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETICULATA-RELATED 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016730314
VERSION     XP_016730314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874825.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..415
                     /product="protein RETICULATA-RELATED 1, chloroplastic"
                     /calculated_mol_wt=44524
     Region          190..369
                     /region_name="RETICULATA-like"
                     /note="Protein RETICULATA-related; pfam11891"
                     /db_xref="CDD:432167"
     CDS             1..415
                     /gene="LOC107941269"
                     /coded_by="XM_016874825.2:50..1297"
                     /db_xref="GeneID:107941269"
ORIGIN      
        1 msmssppprf klsalsnggg ngsmtinvig trnfarfkgi ieiesrlklt ssrfklsgfs
       61 tlhcvrppds agnttengei gsessvsdig isdqekiggg cggggrdngg ndsfggggge
      121 deegkefgpi lkfeevkkea eargvklpsd mmdaaksygi rklfllryld lqgsiwplgf
      181 lmkhcsmlrd rmladpsflf kvgtevgids fcatfaemkk rgdafwsefe lyladvlvgl
      241 vidvalvgml apyarfsqps apsrglfgsl qqacsalpss vfeaerpgct fsakqriatf
      301 fykgvlygsv gfgcglvgqg ianlvmttkr rirksdedip vppllrtasl wgvflavsan
      361 aryqiingle qlveaspvtk qvppvamaft igvrfannvy ggmqfvdwak wsgvq
//
LOCUS       XP_016730309             386 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-D-apiose/UDP-D-xylose synthase 2 [Gossypium hirsutum].
ACCESSION   XP_016730309
VERSION     XP_016730309.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874820.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..386
                     /product="UDP-D-apiose/UDP-D-xylose synthase 2"
                     /calculated_mol_wt=43361
     Region          1..386
                     /region_name="PLN02427"
                     /note="UDP-apiose/xylose synthase"
                     /db_xref="CDD:178047"
     Site            order(21,23..26,46..47,74..76,93..95,97,232)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187567"
     Site            order(97,99,102,136..138,179,182,209..212,232..233,
                     236..237,248..250,254,257,295,332,334,338)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187567"
     CDS             1..386
                     /gene="LOC107941263"
                     /coded_by="XM_016874820.2:157..1317"
                     /db_xref="GeneID:107941263"
ORIGIN      
        1 maarmdldgr pikpmticmi gaggfigshl ceklmaetph kvlaldvynd kikrllepds
       61 lpwagriefh rinikhdsrl eglvkmadlt inlaaictpa dyntrpldti ysnfidalpv
      121 vkycsenskr lirfstcevy gktigsflpk dsplrkdpay yvlkedtspc ifgsiekqrw
      181 pyacakqlie rliyaegaes gldftivrpf nwigprmdfi pgidgpsegv prvlacfsnn
      241 llrreplklv dggqsqrtfv yikdaieavl lmienpdran ghifnvgnpn nevtvrqlae
      301 mmtqvytkvs gepmlqspsi dvsskefyge gyddsdkrip dmtiinkqlg wnpktslwdl
      361 lestltyqyr tyaeaikksm akptas
//
LOCUS       XP_016730310             677 aa            linear   PLN 06-AUG-2024
DEFINITION  putative phospholipid:diacylglycerol acyltransferase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016730310
VERSION     XP_016730310.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874821.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016730310.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..677
                     /product="putative phospholipid:diacylglycerol
                     acyltransferase 2"
                     /calculated_mol_wt=75510
     Region          40..677
                     /region_name="PLN02517"
                     /note="phosphatidylcholine-sterol O-acyltransferase"
                     /db_xref="CDD:178132"
     CDS             1..677
                     /gene="LOC107941265"
                     /coded_by="XM_016874821.2:81..2114"
                     /db_xref="GeneID:107941265"
ORIGIN      
        1 masnflrlrk pyyvestinc ssssdqklvn lsfgidetrn qtkkrqakeh hgrrscldsc
       61 cwvtgylctt wwlllflyhc clpftvvhev pqlmpaarlk regltgihpv vlvpgivtgg
      121 lelwegkpca dglfrkrlwg gggftqllkr plcwlehlsl hnetgldppg irvrpvpglf
      181 gadysapgyf vwdvlvknla kigyegknlh maaydwrlsf qntevrdcal srlkskielm
      241 yrangnkkvv vvphsmgvay flhflkwvet pppmgggggl gwcaehikai vnigpsflgv
      301 pkavsnilsa egkdvayfra mapgvldsgt lglralehvm rvsrtwdsvv slmpkggeti
      361 wgnmdwsped ehvcdfskkr yfrlspsdnn vnksnakqvf rvkdpvkygr iisfgkaasv
      421 lhssqlptav lkeilhmsas rnftsscgea wteydemsre siqkigaadk aytattlfdl
      481 lrfvapkmmn rteahfshgi adnlddpkyn hykfwsnple mklpdapnme iycsygvgip
      541 tersyvykls psnkckripy qidtsvdged rsclksgvyf adgdesvpvl sagfmcakgw
      601 kgrtrfnpsg intyvreyqs kpltsgikst ahvdimgnia liedilrvaa gatgeeiggn
      661 kiysdilrms erinlrl
//
LOCUS       XP_040941841             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941841
VERSION     XP_040941841.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085907.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15473
     Region          6..>97
                     /region_name="RMI2"
                     /note="RecQ-mediated genome instability protein 2;
                     pfam16100"
                     /db_xref="CDD:465022"
     CDS             1..139
                     /gene="LOC107941262"
                     /coded_by="XM_041085907.1:150..569"
                     /db_xref="GeneID:107941262"
ORIGIN      
        1 mdyslaalkl lcgqlkdarg tpsqsaltlg gilfqrvwlq gvlvsndded hlllddstgi
       61 velnlsgdfr qrqwktgmyv mvvggyfvrt gdipvikrcg iskfwkltnf stspslknsy
      121 elmnhsflcl lespkrlve
//
LOCUS       XP_016730308             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016730308
VERSION     XP_016730308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874819.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15111
     Region          6..122
                     /region_name="RMI2"
                     /note="RecQ-mediated genome instability protein 2;
                     pfam16100"
                     /db_xref="CDD:465022"
     CDS             1..134
                     /gene="LOC107941262"
                     /coded_by="XM_016874819.2:121..525"
                     /db_xref="GeneID:107941262"
ORIGIN      
        1 mdyslaalkl lcgqlkdarg tpsqsaltlg gilfqrvwlq gvlvsndded hlllddstgi
       61 velnlsgdfr qrqwktgmyv mvvggyfvrt gdipvikvhk ivdlspfpdr eamwylevle
      121 ayklfyqpli eefi
//
LOCUS       XP_016730306             463 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium transporter MRS2-11, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016730306
VERSION     XP_016730306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874817.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..463
                     /product="magnesium transporter MRS2-11, chloroplastic"
                     /calculated_mol_wt=51267
     Region          138..462
                     /region_name="Mrs2_Mfm1p-like"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     cd12823"
                     /db_xref="CDD:213357"
     Site            order(149,182,194,196..197,211..214,251,254,303..304,307,
                     361)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:213357"
     Site            order(166,169..170,183,185,219,223,242,245,249,253,
                     256..257,260,263..264,266..267,270,282..283,285..286,
                     289..290,293..294,296..297,301,303..304,307..308,311..312,
                     337..338,358..359,362..363,365..366,369..370,372..373,
                     375..377,380..387,389..401,403..405,407..412,414..417,
                     421..424,435..436,439..440,456,459)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:213357"
     CDS             1..463
                     /gene="LOC107941259"
                     /coded_by="XM_016874817.2:49..1440"
                     /db_xref="GeneID:107941259"
ORIGIN      
        1 maltpppspn llqvsvksss spclspsvhy llfgspcana spfllqksgl pllpvavkps
       61 slerrikcft trsytkedrl nepetfsaed vagggdedgg sedldlqqnr gsavaspria
      121 ssssdslslg irepvyevle vksngvvstr kinrrqllks sglrprdirs vdpslfltns
      181 apsilvreha illnlgslra iamrecvlif eynrkggqaf mdtllprlnn mnggpcmpfe
      241 levveaalls rtqrleqrlm dleprvqall eelpkkltvd ileqlriskq tlvelcsrag
      301 alrqmlldll edpheirric imgrnctlkr gtddvecslp lekliaeeee eeiemlleny
      361 lqrceschgq aerlldsake medsisvnls srrlevskve lllqvgtfcv avgalvagif
      421 gmnlksyley hmfafwvtta giivggvvaf fliysylrar ril
//
LOCUS       XP_040941842             493 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase 36 [Gossypium hirsutum].
ACCESSION   XP_040941842
VERSION     XP_040941842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085908.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..493
                     /product="aspartic proteinase 36"
                     /calculated_mol_wt=52753
     Region          83..442
                     /region_name="pepsin_A_like_plant"
                     /note="Chroloplast Nucleoids DNA-binding Protease and
                     Nucellin, pepsin-like aspartic proteases from plants;
                     cd05476"
                     /db_xref="CDD:133143"
     Region          <83..>159
                     /region_name="PTZ00165"
                     /note="aspartyl protease; Provisional"
                     /db_xref="CDD:240300"
     Site            order(101..104,319..322)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133143"
     Site            order(101,319)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133143"
     Site            order(168..171,175..178)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133143"
     CDS             1..493
                     /gene="LOC121212670"
                     /coded_by="XM_041085908.1:244..1725"
                     /db_xref="GeneID:121212670"
ORIGIN      
        1 maavfrdwvv itvviteaav vmggfpatfk lersiplash elelselver drlrhgrlle
       61 sspvgvvgfp vsgtydpfiv glyyttlqlg spprefnvqi dtgsdvlwvg cnscngcpks
      121 sgleiplnff dpgssstasl vscsdqrcss giqasdstcs gssnqcsytf qygdgsgtsg
      181 yyvsdllhfn tvlpgsttgn atasimfgcs mlhtgkltds hravdgifgf gqqslsvisq
      241 lssqqvtpra fshclkgndd gggilvlgei vepdmvytpl vpsmphynld lrsisvggqv
      301 lsidasvfst sinhgaiids gttlsylade aynafidain navsehvhpv lshgnqcyli
      361 tdsighifpe asfnfaggas lilhpedfli qqnpiggsav wcigfktieg qkltilgdlv
      421 mkdkifvydl ekqrigwvny dcsssvnvsv ysepgktefv narpinnsss pdnlwttval
      481 llhmfmlacv lll
//
LOCUS       XP_040941843            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941843
VERSION     XP_040941843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085909.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1228
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=132713
     Region          45..1182
                     /region_name="Smg8_Smg9"
                     /note="pfam10220"
                     /db_xref="CDD:463005"
     CDS             1..1228
                     /gene="LOC121212671"
                     /coded_by="XM_041085909.1:160..3846"
                     /db_xref="GeneID:121212671"
ORIGIN      
        1 mdspnppsmr vltrpppspv ptsspsssss snpppptpsf prsldgvvvv gfvsrrpdds
       61 sqlinrvves nvfgsgqmdr vlsidkdelk dwfkyrrisy fheedkrilf lqfssngcpa
      121 fdgslssgsd fdgvleeref gdlqgllfmf svchiiiyiq egscfdtqnl kkfrvlqaak
      181 halipyvksq ttpplpsrph sslssrpltt ataantspgr sggmlgrnas aislmlglgs
      241 ytslfpgqct pvmlfvfvdd fsdvpnsssn sseesvkaps lnhasssssl akptlpmkgs
      301 asvvvlarpa skseggfrkk lqssleaqir flikkcrtls gsegshggsr sgsvsnsapl
      361 fsldasravv lldkstykrr eslefaiglv edvlngkats dsfllethsq ssnkedlssl
      421 kefiyrqsdi lrgrgglvan tnsgpaagvg mvavaaaaaa astasaasak tlttpelptl
      481 diwlsssqli lhgllsakrr cideteigkr kprrgtvagq seglasrsse sldiavswle
      541 sgkglnakfs slwceralpa akdiylkdlp acyptsqhea hlqkalhafh smvrgpavel
      601 fakkleeect smwksgrqlc davsltgkpc lhrrhdlqtd elpsgtltkp hssgyvflha
      661 cacgrtrrlr sdafdfesan itsncfpdcd kllsalqlpe vsskgpiqss swslirigss
      721 ryyepskgll qsgfsatekf llkwkillek qktpnglstr tmqlgsvgrs ssdtkaefna
      781 dvqlkkasst efcsgeieta venprkplei skfngnkisf grglpnftmk kpfsevvags
      841 aatdsgfppl qqrkqplsgs ekgikknkas alslegahat vaqgsqkpvk msvmqnmnqv
      901 ssdgsaaads dpflrigsnf vpvnvsndek akrnsdtkhv mayvgfehec phghrfllnp
      961 ehlnqlgppy slfeeshttc sveasdhtla dsselrkngg qgkvnlntng viaaatpvnk
     1021 vknkdeekkv vansnvfkdg ltqlsmpedh nktpvnaagv pvagkdlekg fhavslddsg
     1081 stfsmlnrdl piylkcphcr ssrnkkeppk vkfagtisql qrifvvtppf pvvlatcpii
     1141 qfkasclpat vpdreqklqf slgckvilpp esflilrlpf mygvelddks vhslnpfedk
     1201 pevtgwvvrg ttlqlmskgs glnegfyk
//
LOCUS       XP_040941844            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941844
VERSION     XP_040941844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085910.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1228
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=132713
     Region          45..1182
                     /region_name="Smg8_Smg9"
                     /note="pfam10220"
                     /db_xref="CDD:463005"
     CDS             1..1228
                     /gene="LOC121212671"
                     /coded_by="XM_041085910.1:160..3846"
                     /db_xref="GeneID:121212671"
ORIGIN      
        1 mdspnppsmr vltrpppspv ptsspsssss snpppptpsf prsldgvvvv gfvsrrpdds
       61 sqlinrvves nvfgsgqmdr vlsidkdelk dwfkyrrisy fheedkrilf lqfssngcpa
      121 fdgslssgsd fdgvleeref gdlqgllfmf svchiiiyiq egscfdtqnl kkfrvlqaak
      181 halipyvksq ttpplpsrph sslssrpltt ataantspgr sggmlgrnas aislmlglgs
      241 ytslfpgqct pvmlfvfvdd fsdvpnsssn sseesvkaps lnhasssssl akptlpmkgs
      301 asvvvlarpa skseggfrkk lqssleaqir flikkcrtls gsegshggsr sgsvsnsapl
      361 fsldasravv lldkstykrr eslefaiglv edvlngkats dsfllethsq ssnkedlssl
      421 kefiyrqsdi lrgrgglvan tnsgpaagvg mvavaaaaaa astasaasak tlttpelptl
      481 diwlsssqli lhgllsakrr cideteigkr kprrgtvagq seglasrsse sldiavswle
      541 sgkglnakfs slwceralpa akdiylkdlp acyptsqhea hlqkalhafh smvrgpavel
      601 fakkleeect smwksgrqlc davsltgkpc lhrrhdlqtd elpsgtltkp hssgyvflha
      661 cacgrtrrlr sdafdfesan itsncfpdcd kllsalqlpe vsskgpiqss swslirigss
      721 ryyepskgll qsgfsatekf llkwkillek qktpnglstr tmqlgsvgrs ssdtkaefna
      781 dvqlkkasst efcsgeieta venprkplei skfngnkisf grglpnftmk kpfsevvags
      841 aatdsgfppl qqrkqplsgs ekgikknkas alslegahat vaqgsqkpvk msvmqnmnqv
      901 ssdgsaaads dpflrigsnf vpvnvsndek akrnsdtkhv mayvgfehec phghrfllnp
      961 ehlnqlgppy slfeeshttc sveasdhtla dsselrkngg qgkvnlntng viaaatpvnk
     1021 vknkdeekkv vansnvfkdg ltqlsmpedh nktpvnaagv pvagkdlekg fhavslddsg
     1081 stfsmlnrdl piylkcphcr ssrnkkeppk vkfagtisql qrifvvtppf pvvlatcpii
     1141 qfkasclpat vpdreqklqf slgckvilpp esflilrlpf mygvelddks vhslnpfedk
     1201 pevtgwvvrg ttlqlmskgs glnegfyk
//
LOCUS       XP_040941845            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941845
VERSION     XP_040941845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085911.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1228
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=132713
     Region          45..1182
                     /region_name="Smg8_Smg9"
                     /note="pfam10220"
                     /db_xref="CDD:463005"
     CDS             1..1228
                     /gene="LOC121212671"
                     /coded_by="XM_041085911.1:160..3846"
                     /db_xref="GeneID:121212671"
ORIGIN      
        1 mdspnppsmr vltrpppspv ptsspsssss snpppptpsf prsldgvvvv gfvsrrpdds
       61 sqlinrvves nvfgsgqmdr vlsidkdelk dwfkyrrisy fheedkrilf lqfssngcpa
      121 fdgslssgsd fdgvleeref gdlqgllfmf svchiiiyiq egscfdtqnl kkfrvlqaak
      181 halipyvksq ttpplpsrph sslssrpltt ataantspgr sggmlgrnas aislmlglgs
      241 ytslfpgqct pvmlfvfvdd fsdvpnsssn sseesvkaps lnhasssssl akptlpmkgs
      301 asvvvlarpa skseggfrkk lqssleaqir flikkcrtls gsegshggsr sgsvsnsapl
      361 fsldasravv lldkstykrr eslefaiglv edvlngkats dsfllethsq ssnkedlssl
      421 kefiyrqsdi lrgrgglvan tnsgpaagvg mvavaaaaaa astasaasak tlttpelptl
      481 diwlsssqli lhgllsakrr cideteigkr kprrgtvagq seglasrsse sldiavswle
      541 sgkglnakfs slwceralpa akdiylkdlp acyptsqhea hlqkalhafh smvrgpavel
      601 fakkleeect smwksgrqlc davsltgkpc lhrrhdlqtd elpsgtltkp hssgyvflha
      661 cacgrtrrlr sdafdfesan itsncfpdcd kllsalqlpe vsskgpiqss swslirigss
      721 ryyepskgll qsgfsatekf llkwkillek qktpnglstr tmqlgsvgrs ssdtkaefna
      781 dvqlkkasst efcsgeieta venprkplei skfngnkisf grglpnftmk kpfsevvags
      841 aatdsgfppl qqrkqplsgs ekgikknkas alslegahat vaqgsqkpvk msvmqnmnqv
      901 ssdgsaaads dpflrigsnf vpvnvsndek akrnsdtkhv mayvgfehec phghrfllnp
      961 ehlnqlgppy slfeeshttc sveasdhtla dsselrkngg qgkvnlntng viaaatpvnk
     1021 vknkdeekkv vansnvfkdg ltqlsmpedh nktpvnaagv pvagkdlekg fhavslddsg
     1081 stfsmlnrdl piylkcphcr ssrnkkeppk vkfagtisql qrifvvtppf pvvlatcpii
     1141 qfkasclpat vpdreqklqf slgckvilpp esflilrlpf mygvelddks vhslnpfedk
     1201 pevtgwvvrg ttlqlmskgs glnegfyk
//
LOCUS       XP_040941846            1079 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941846
VERSION     XP_040941846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085912.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1079
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=116268
     Region          2..1033
                     /region_name="Smg8_Smg9"
                     /note="pfam10220"
                     /db_xref="CDD:463005"
     CDS             1..1079
                     /gene="LOC121212671"
                     /coded_by="XM_041085912.1:138..3377"
                     /db_xref="GeneID:121212671"
ORIGIN      
        1 mqvchiiiyi qegscfdtqn lkkfrvlqaa khalipyvks qttpplpsrp hsslssrplt
       61 tataantspg rsggmlgrna saislmlglg sytslfpgqc tpvmlfvfvd dfsdvpnsss
      121 nsseesvkap slnhasssss lakptlpmkg sasvvvlarp askseggfrk klqssleaqi
      181 rflikkcrtl sgsegshggs rsgsvsnsap lfsldasrav vlldkstykr reslefaigl
      241 vedvlngkat sdsflleths qssnkedlss lkefiyrqsd ilrgrgglva ntnsgpaagv
      301 gmvavaaaaa aastasaasa ktlttpelpt ldiwlsssql ilhgllsakr rcideteigk
      361 rkprrgtvag qseglasrss esldiavswl esgkglnakf sslwceralp aakdiylkdl
      421 pacyptsqhe ahlqkalhaf hsmvrgpave lfakkleeec tsmwksgrql cdavsltgkp
      481 clhrrhdlqt delpsgtltk phssgyvflh acacgrtrrl rsdafdfesa nitsncfpdc
      541 dkllsalqlp evsskgpiqs sswslirigs sryyepskgl lqsgfsatek fllkwkille
      601 kqktpnglst rtmqlgsvgr sssdtkaefn advqlkkass tefcsgeiet avenprkple
      661 iskfngnkis fgrglpnftm kkpfsevvag saatdsgfpp lqqrkqplsg sekgikknka
      721 salslegaha tvaqgsqkpv kmsvmqnmnq vssdgsaaad sdpflrigsn fvpvnvsnde
      781 kakrnsdtkh vmayvgfehe cphghrflln pehlnqlgpp yslfeeshtt csveasdhtl
      841 adsselrkng gqgkvnlntn gviaaatpvn kvknkdeekk vvansnvfkd gltqlsmped
      901 hnktpvnaag vpvagkdlek gfhavsldds gstfsmlnrd lpiylkcphc rssrnkkepp
      961 kvkfagtisq lqrifvvtpp fpvvlatcpi iqfkasclpa tvpdreqklq fslgckvilp
     1021 pesflilrlp fmygvelddk svhslnpfed kpevtgwvvr gttlqlmskg sglnegfyk
//
LOCUS       XP_040941847             583 aa            linear   PLN 06-AUG-2024
DEFINITION  asparagine synthetase [glutamine-hydrolyzing] 1 [Gossypium
            hirsutum].
ACCESSION   XP_040941847
VERSION     XP_040941847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085913.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..583
                     /product="asparagine synthetase [glutamine-hydrolyzing] 1"
                     /calculated_mol_wt=65246
     Region          1..577
                     /region_name="PLN02549"
                     /note="asparagine synthase (glutamine-hydrolyzing)"
                     /db_xref="CDD:178164"
     CDS             1..583
                     /gene="LOC107945000"
                     /coded_by="XM_041085913.1:146..1897"
                     /db_xref="GeneID:107945000"
ORIGIN      
        1 mcgilavlgc sdsqakrvrv lelsrrlkhr gpdwsglyqh gdcylahqrl aiidpasgdq
       61 plfnedksva vtvngeiynh eelrknlvnh kfrtgsdcdv iahlyeeyge dfvdmldgif
      121 sfvlldtrdn syivardaig vtslyigwgl dgsvwiasel kglnddcehf esfppghlys
      181 sksggfrrwy nppwfsevtp svpydplvlr rafenavikr lmtdvpfgvl lsggldsslv
      241 asitarylag tkaakqwgsq lhsfcvgleg spdlkaarev adylgtvhhe fhftvqdgid
      301 aiedviyhie tydvttiras tpmflmsrki kslgvkmvis gegsdeifgg ylyfhkapnk
      361 defhqetcrk ikalhlydcl rankatsawg learvpfldk efinvamaid peskminkde
      421 griekwvlrr afddenhpyl pkhilyrqke qfsdgvgysw idglkahaaa nvtdkmmlna
      481 snifphntpt tkeayyyrmi ferffpqnsa rltvpggasv acstakavew datwknnldp
      541 sgraalgvhl saydsetpld nkpskiiesi plmmeipgva ihg
//
LOCUS       XP_040941848             110 aa            linear   PLN 06-AUG-2024
DEFINITION  PHD finger-like domain-containing protein 5A [Gossypium hirsutum].
ACCESSION   XP_040941848
VERSION     XP_040941848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085914.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="PHD finger-like domain-containing protein 5A"
                     /calculated_mol_wt=12265
     Region          1..104
                     /region_name="PHF5"
                     /note="PHF5-like protein; pfam03660"
                     /db_xref="CDD:461008"
     CDS             1..110
                     /gene="LOC121212672"
                     /coded_by="XM_041085914.1:173..505"
                     /db_xref="GeneID:121212672"
ORIGIN      
        1 makhhpdlim crkqpgiaig rlcekhdgkc vvcdslvhpc tlvrvcdecn ygsfqskcvi
       61 cggvgisday yckectqler drdgcpkivn lgsaktdlyy erkkygfkkr
//
LOCUS       XP_040941849             110 aa            linear   PLN 06-AUG-2024
DEFINITION  PHD finger-like domain-containing protein 5A [Gossypium hirsutum].
ACCESSION   XP_040941849
VERSION     XP_040941849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085915.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="PHD finger-like domain-containing protein 5A"
                     /calculated_mol_wt=12462
     Region          1..104
                     /region_name="PHF5"
                     /note="PHF5-like protein; pfam03660"
                     /db_xref="CDD:461008"
     CDS             1..110
                     /gene="LOC121212673"
                     /coded_by="XM_041085915.1:351..683"
                     /db_xref="GeneID:121212673"
ORIGIN      
        1 makhqpdlim crklpgiaig rlcekhdgkc vicnslvhps tlvricdecs yglfrhkcvi
       61 cgdvgisday yckectqlek drdgcpkivn fgstktdlyy khkkydfkkr
//
LOCUS       XP_016743712              82 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSY3 [Gossypium hirsutum].
ACCESSION   XP_016743712
VERSION     XP_016743712.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016743712.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..82
                     /product="protein PSY3"
                     /calculated_mol_wt=8685
     CDS             1..82
                     /gene="LOC107952997"
                     /coded_by="XM_016888223.2:12..260"
                     /db_xref="GeneID:107952997"
ORIGIN      
        1 msfkaklcff llftltivss ackaisissg deiliatker slvaniedys eptanrghdp
       61 tsrarsgggn grgrghsrdr kg
//
LOCUS       XP_040941850             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941850
VERSION     XP_040941850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085916.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..257
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28905
     Region          171..217
                     /region_name="Ribosomal_S18"
                     /note="Ribosomal protein S18; pfam01084"
                     /db_xref="CDD:460054"
     CDS             1..257
                     /gene="LOC121212674"
                     /coded_by="XM_041085916.1:164..937"
                     /db_xref="GeneID:121212674"
ORIGIN      
        1 mritramlss lsggftrpvq ylgtvrsfst ankfdgnipn sgsfesteef egrifggsss
       61 dsekaqaffe kldkrsryrl gpsmanrdel ddsfsmvsdg mdmklkkaat yfefdlnevh
      121 kndyafrpdv tfhsgstyep kdldlrrpgv rkppktatfe vtteevlrka dfrnvkflaq
      181 flteagiiik rsstgisaka qrkvareikt arafglmpft tmgtksfvfg rsmevdnkdy
      241 eyeafddmtp amdekda
//
LOCUS       XP_040941851              75 aa            linear   PLN 06-AUG-2024
DEFINITION  metallothionein-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941851
VERSION     XP_040941851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085917.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..75
                     /product="metallothionein-like protein 1"
                     /calculated_mol_wt=7546
     Region          3..75
                     /region_name="Metallothio_2"
                     /note="Metallothionein; pfam01439"
                     /db_xref="CDD:396155"
     CDS             1..75
                     /gene="LOC121212675"
                     /coded_by="XM_041085917.1:191..418"
                     /db_xref="GeneID:121212675"
ORIGIN      
        1 mssgcncgsn cscgdncscs rnlnlgysek ttstqtiisg vapvkmtfeg pemsttesgh
       61 gckcgsncsc dpcnc
//
LOCUS       XP_040941853             492 aa            linear   PLN 06-AUG-2024
DEFINITION  probable GTP-binding protein OBGM, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941853
VERSION     XP_040941853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085919.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..492
                     /product="probable GTP-binding protein OBGM, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=53099
     Region          49..469
                     /region_name="Obg"
                     /note="GTPase involved in cell partioning and DNA repair
                     [Cell cycle control, cell division, chromosome
                     partitioning, Replication, recombination, and repair];
                     COG0536"
                     /db_xref="CDD:440302"
     CDS             1..492
                     /gene="LOC121212676"
                     /coded_by="XM_041085919.1:387..1865"
                     /db_xref="GeneID:121212676"
ORIGIN      
        1 mwiarakpll qlqtirrrcs kspcyvfsfl sysdvpnkks plqetrmrdr fnlyakggdg
       61 gngstsfrrs rhdrrgkpdg gnggrggdvi lecstavwdf sglqnhvnag rgghgtsknk
      121 igtrgedkil qvpigtvihl kkgeipsmle hcssadldpw elpgslstdq sevdqlpssk
      181 ntsmaekvks thvaghlsfc teitvdqssg mnqatgpqse pteeisynva elteegqrmi
      241 vanggegglg nvcypnvtmk pkmtkgevpr dnsiedeasn ddrsslrtgl pgseavlvle
      301 lksipdvglv gmpnagkstl lgaisrakpa ighyafttlr pnlgnlnfdd lsitvadipg
      361 likgahqnrg lghaflrhie rtkvlayvvd laaaldgrkg ippweqlrdl vlelehhqgg
      421 lsnrpalvva nkidetgaed vfrelekrve gvpiyrvcav leegisevka glkllvngde
      481 nssslnieni rc
//
LOCUS       XP_040941854             492 aa            linear   PLN 06-AUG-2024
DEFINITION  probable GTP-binding protein OBGM, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941854
VERSION     XP_040941854.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085920.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..492
                     /product="probable GTP-binding protein OBGM, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=53099
     Region          49..469
                     /region_name="Obg"
                     /note="GTPase involved in cell partioning and DNA repair
                     [Cell cycle control, cell division, chromosome
                     partitioning, Replication, recombination, and repair];
                     COG0536"
                     /db_xref="CDD:440302"
     CDS             1..492
                     /gene="LOC121212676"
                     /coded_by="XM_041085920.1:541..2019"
                     /db_xref="GeneID:121212676"
ORIGIN      
        1 mwiarakpll qlqtirrrcs kspcyvfsfl sysdvpnkks plqetrmrdr fnlyakggdg
       61 gngstsfrrs rhdrrgkpdg gnggrggdvi lecstavwdf sglqnhvnag rgghgtsknk
      121 igtrgedkil qvpigtvihl kkgeipsmle hcssadldpw elpgslstdq sevdqlpssk
      181 ntsmaekvks thvaghlsfc teitvdqssg mnqatgpqse pteeisynva elteegqrmi
      241 vanggegglg nvcypnvtmk pkmtkgevpr dnsiedeasn ddrsslrtgl pgseavlvle
      301 lksipdvglv gmpnagkstl lgaisrakpa ighyafttlr pnlgnlnfdd lsitvadipg
      361 likgahqnrg lghaflrhie rtkvlayvvd laaaldgrkg ippweqlrdl vlelehhqgg
      421 lsnrpalvva nkidetgaed vfrelekrve gvpiyrvcav leegisevka glkllvngde
      481 nssslnieni rc
//
LOCUS       XP_040941855             398 aa            linear   PLN 06-AUG-2024
DEFINITION  probable GTP-binding protein OBGM, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941855
VERSION     XP_040941855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085921.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..398
                     /product="probable GTP-binding protein OBGM, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=42699
     Region          17..375
                     /region_name="Obg"
                     /note="GTPase involved in cell partioning and DNA repair
                     [Cell cycle control, cell division, chromosome
                     partitioning, Replication, recombination, and repair];
                     COG0536"
                     /db_xref="CDD:440302"
     CDS             1..398
                     /gene="LOC121212676"
                     /coded_by="XM_041085921.1:151..1347"
                     /db_xref="GeneID:121212676"
ORIGIN      
        1 mfhcslglqw pakscrrggh gtsknkigtr gedkilqvpi gtvihlkkge ipsmlehcss
       61 adldpwelpg slstdqsevd qlpsskntsm aekvksthva ghlsfcteit vdqssgmnqa
      121 tgpqseptee isynvaelte egqrmivang gegglgnvcy pnvtmkpkmt kgevprdnsi
      181 edeasnddrs slrtglpgse avlvlelksi pdvglvgmpn agkstllgai srakpaighy
      241 afttlrpnlg nlnfddlsit vadipglikg ahqnrglgha flrhiertkv layvvdlaaa
      301 ldgrkgippw eqlrdlvlel ehhqgglsnr palvvankid etgaedvfre lekrvegvpi
      361 yrvcavleeg isevkaglkl lvngdensss lnienirc
//
LOCUS       XP_040941856             158 aa            linear   PLN 06-AUG-2024
DEFINITION  nudC domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040941856
VERSION     XP_040941856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085922.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="nudC domain-containing protein 2"
                     /calculated_mol_wt=18085
     Region          21..104
                     /region_name="p23_NUDC_like"
                     /note="p23_like domain of NUD (nuclear distribution) C and
                     similar proteins. Aspergillus nidulas (An) NUDC is needed
                     for nuclear movement. AnNUDC is localized at the hyphal
                     cortex, and binds NUDF at spindle pole bodies (SPBs) and
                     in the cytoplasm at different...; cd06467"
                     /db_xref="CDD:107224"
     CDS             1..158
                     /gene="LOC107891963"
                     /coded_by="XM_041085922.1:224..700"
                     /db_xref="GeneID:107891963"
ORIGIN      
        1 maeklapekr hsflhngekv fewdqtleev niyinlppnv hskqfyckiq skhvevgikg
       61 nppylnhdlf spvktdssfw tleddimhit lqkrdkgqtw sspilgqgql dpyatdleqk
      121 rlmlqrfqee npgfdfsqaq ftgscpdprt fmggissd
//
LOCUS       XP_040941857             545 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DAMAGED DNA-BINDING 2 [Gossypium hirsutum].
ACCESSION   XP_040941857
VERSION     XP_040941857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085923.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..545
                     /product="protein DAMAGED DNA-BINDING 2"
                     /calculated_mol_wt=61444
     Region          <153..374
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          163..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          206..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          259..296
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          297..>484
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          303..340
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          348..387
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          399..443
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..545
                     /gene="LOC121212677"
                     /coded_by="XM_041085923.1:138..1775"
                     /db_xref="GeneID:121212677"
ORIGIN      
        1 mapqvrrtaf pkvlierdtd seqsssdddd eeeeqenene ekteefndtk kkgkspitis
       61 lkkvckvckk tgheagfkga tyidcpmkpc flckmpghtt macphrvate hgvvpaphvn
      121 tqnpvefvfe rqlkpritpi kpayvipdqv dcaviryhsr rvtclefhpt nnhillsgdk
      181 kgqlgvwdfa kvhektvygn ihscilnnmr fspandgmiy aassdgtvsc tdletgisst
      241 lmnlnpdgwq gpgswrmlyg mdinlergvv lvadnfgfly lvdsrsnsqt gkaimihkkg
      301 skvvglhcnp fqpdlllscg ndhfarlwdm rrleagsvla nlehrrvvns ayfspfsgtk
      361 ilttsqdnrl riwdsifrdl dspsreivhs hdfnrhltpf raewdpkdps eslavigryi
      421 senyngtalh pidfidintg qlvaevmdpn ittitpvnkl hprddvlasg ssrslfiwrp
      481 kekfdvseqs darkiivfgg dekkrgkrsk ddydddsddd kfnvkgknvk vkkpvkqmth
      541 rkakr
//
LOCUS       XP_040941858             243 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase AIRP2 [Gossypium hirsutum].
ACCESSION   XP_040941858
VERSION     XP_040941858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085924.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..243
                     /product="E3 ubiquitin-protein ligase AIRP2"
                     /calculated_mol_wt=28064
     Region          145..185
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(147,150,162,164,167,170,181,184)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..243
                     /gene="LOC107891961"
                     /coded_by="XM_041085924.1:185..916"
                     /db_xref="GeneID:107891961"
ORIGIN      
        1 mrkssfkdsl kaleadiqha ntlaldypre rdgarlqmrl syspaaqffl flvqwtdiql
       61 agalgllnih iymtyadgkt tmsvyerkas irefyavifp sllqlqrgit dledrkqkea
      121 ctvryrrkde sargkiseid ceredecsic memnglvvlp ncshsmclnc ysdwhdrsqs
      181 cpfcrdslvk vdscdlwiyi eqseiaelss ilrenrkrlf tyidrlpliv pdpvfapfdv
      241 hvh
//
LOCUS       XP_040941859             148 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 71K1-like [Gossypium hirsutum].
ACCESSION   XP_040941859
VERSION     XP_040941859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085925.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..148
                     /product="UDP-glycosyltransferase 71K1-like"
                     /calculated_mol_wt=16851
     Region          <2..145
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     CDS             1..148
                     /gene="LOC121212678"
                     /coded_by="XM_041085925.1:1..447"
                     /db_xref="GeneID:121212678"
ORIGIN      
        1 mlpegfveri qgkgmmiygw apqveilahk aiggfvshcg wnsileslwf gvpmvtwpmy
       61 aeqklnvfkm mkelelavel rldyeqlkvd dvvmadeiek avkqvmdern earkkvkema
      121 eiarksivse gssflsiqrl indmisnn
//
LOCUS       XP_016672382             145 aa            linear   PLN 06-AUG-2024
DEFINITION  pleckstrin homology domain-containing protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016672382
VERSION     XP_016672382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816893.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..145
                     /product="pleckstrin homology domain-containing protein 1"
                     /calculated_mol_wt=16612
     Region          29..135
                     /region_name="PH_AtPH1"
                     /note="Arabidopsis thaliana Pleckstrin homolog (PH) 1
                     (AtPH1) PH domain; cd13276"
                     /db_xref="CDD:270095"
     CDS             1..145
                     /gene="LOC107891959"
                     /coded_by="XM_016816893.2:140..577"
                     /db_xref="GeneID:107891959"
ORIGIN      
        1 menlwraatg qdpnpddykg vefwtnpera gwltkqgdyi ktwrrrwfil kqgkllwfkd
       61 pasvsrrssp rgvvsvgscl tvkgaedivn kafafelstr dstmyfiadt ekekedwins
      121 igrsivqhsr svtdseivdy dsksr
//
LOCUS       XP_040941860             606 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase BoGH3B [Gossypium hirsutum].
ACCESSION   XP_040941860
VERSION     XP_040941860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085926.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..606
                     /product="beta-glucosidase BoGH3B"
                     /calculated_mol_wt=66550
     Region          23..>425
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          389..598
                     /region_name="Glyco_hydro_3_C"
                     /note="Glycosyl hydrolase family 3 C-terminal domain;
                     pfam01915"
                     /db_xref="CDD:396478"
     CDS             1..606
                     /gene="LOC107943616"
                     /coded_by="XM_041085926.1:885..2705"
                     /db_xref="GeneID:107943616"
ORIGIN      
        1 mdctyknpna piedrvkdll srmtlqekig qmtqiersva tpadlksfsi gsilsaggsv
       61 pfekalpadw admvdkfqqa alesrlgipl iygidavhgn nsvygatifp hnvgvgatrd
      121 adlaqrigaa talevratgi hydfapcvav crdprwgrcf ecysedtniv rkmtsiitgl
      181 qgkppadypk gypfvagrnn viacakhfvg dggtekgine gntilsyddl esihmapyld
      241 cisqgvstim asysswngrq lhadrfllte ilkdklgfkg fvisdweald rlteprgsny
      301 rycistavna gidmvmvplr ykqfmddltf lvesgevlms riddaveril rvkfvsglfe
      361 ypfsdrslld ivgcklhrel areavrkslv llkngknpen pflpldrtak rilvagshad
      421 nlgyqcggwt stwfggsgri tigttildai resagdktev iydecpstnt lagqysfsiv
      481 vvgeppyaet lgdnkelvip fngsdiissv aekiptlail isgrplvlep qvlekvdafi
      541 aawlpgtegr gvtdvvfgdf efegrlpmtw frskdqlpmn pgqnsydplf plgfgltynk
      601 ekkpqe
//
LOCUS       XP_016732879             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732879
VERSION     XP_016732879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..162
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18936
     CDS             1..162
                     /gene="LOC107943617"
                     /coded_by="XM_016877390.2:296..784"
                     /db_xref="GeneID:107943617"
ORIGIN      
        1 mvrkryqeak tgfqllksid adkylkkigl gkedhyfwkq vgkallctyt lfgvawlyne
       61 tsplgwwtlk prpkeerela hlyerrefpy pgdaeameef vakggmigtt igpkgiietd
      121 kdsvnyqkem qnkkfeqeam klwlrmrnev iselqekgyd ve
//
LOCUS       XP_016732875             837 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-glucan phosphorylase, H isozyme [Gossypium hirsutum].
ACCESSION   XP_016732875
VERSION     XP_016732875.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732875.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..837
                     /product="alpha-glucan phosphorylase, H isozyme"
                     /calculated_mol_wt=95202
     Region          29..831
                     /region_name="GT35_Glycogen_Phosphorylase"
                     /note="glycogen phosphorylase and similar proteins;
                     cd04300"
                     /db_xref="CDD:340853"
     Site            order(29,31..32,34..36,59..61,192,283,286)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340853"
     Site            order(87,89,133..135,281,284,286,293,337,339,375..376,380,
                     483,490,568..569,571..574,611,616,618,652..653,675,
                     677..680,683)
                     /site_type="active"
                     /note="active site pocket [active]"
                     /db_xref="CDD:340853"
     CDS             1..837
                     /gene="LOC107943612"
                     /coded_by="XM_016877386.2:281..2794"
                     /db_xref="GeneID:107943612"
ORIGIN      
        1 maengksate kvpavanpls eqpseiasni nyhaqfsphf spfkfepeqa ffataesvrd
       61 rlvkqwnetf vhyhkvdpkq tyylsmeylq graltnaign ldiqnaysea lnklghelee
      121 iaeqekdaal gngglgrlas cfldsmatln lpawgyglry kyglfkqlvt kqgqeeiaed
      181 wlekfspwev vrhdivfpvr ffgsveinpd gsrkwvggev vqalaydvpi pgyktkntis
      241 lrlweakara edfnlfqfnd gqyesaaqlh sraqqicavl ypgdatedgk llrlkqqffl
      301 csaslqdiil rfkerrsgkg swkwsefpsk vavqlndthp tlaipelmrl liddeglgwd
      361 eawdvttrti aytnhtvlpe alekwsqsvm wkllprhmei ieeidkrfla minatrpdle
      421 hklptmrvld hnpqkpvvrm anlcvvsaht vngvaqlhsd ilkaelfady isiwptkfqn
      481 ktngitprrw lrfcspelsn iitkwlktdq wvtnldllsg lrefadnvdf qdewasakma
      541 nkqrlaqyil rvtgesidpn slfdiqvkri heykrqllni lgaiyrykkl kemspeqrkn
      601 ttsrtimigg kafatytnak rivklvndvg avvnndpevn sylkvvfvpn ynvsvaemli
      661 pgselsqhis tagmeasgts nmkfalngcl iigtldganv eireeigeen fflfgarade
      721 vpqlrkdren glfkpdprfe eakqfirrga fgsydynpll dslegnsgyg rgdyflvghd
      781 fpdymdaqar vdeaykdrkk wlkmsilsta gsgkfssdrt iaqyakeiwn ieecrvp
//
LOCUS       XP_040941861             428 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR45a [Gossypium hirsutum].
ACCESSION   XP_040941861
VERSION     XP_040941861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085927.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..428
                     /product="serine/arginine-rich splicing factor SR45a"
                     /calculated_mol_wt=50851
     Region          49..126
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     Region          271..>361
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     CDS             1..428
                     /gene="LOC121212679"
                     /coded_by="XM_041085927.1:193..1479"
                     /db_xref="GeneID:121212679"
ORIGIN      
        1 msytkrsrys sspspnkryt rsvsrslsss rsrsrsksrs aesdvenpgn slyvtglspr
       61 itkrelekhf asegnvidvh lvvdprtrds rgfgfvtmat nkeadrciky ldgsvlegrv
      121 itvekarrrr grtptpgryl glrtirerhr spsfspcrtp syspysssrs psscyssdrs
      181 rsrsrsyspq yrsysrahsr fsrspddryy rknyrycsys pedryyrrrd rsyspydryy
      241 rrrdcsyspd dryyrrrdrf yspddryhcr rdrsyspedr yyrrrdrsys pedrhyrrre
      301 rsyspddryy risrdrsysp ydsryrrhhy rsasrslkpp rsrrasrrsc sysvsskrst
      361 slrrscscst ssvgrrsrsy slsvsppprr ssrslrqdgs nksysrrsgs palrsmsrsv
      421 sprsnsss
//
LOCUS       XP_040941862             266 aa            linear   PLN 06-AUG-2024
DEFINITION  proliferating cell nuclear antigen [Gossypium hirsutum].
ACCESSION   XP_040941862
VERSION     XP_040941862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085928.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..266
                     /product="proliferating cell nuclear antigen"
                     /calculated_mol_wt=29340
     Region          1..261
                     /region_name="PLN00057"
                     /note="proliferating cell nuclear antigen; Provisional"
                     /db_xref="CDD:177688"
     Site            order(13..14,20,77,80,146,149,210,217)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238322"
     Site            order(27,29,40,67,69,119..122,252..255)
                     /site_type="other"
                     /note="PCNA/WAF1-CIP1 protein binding site [polypeptide
                     binding]"
                     /db_xref="CDD:238322"
     Site            order(40,47,250)
                     /site_type="other"
                     /note="PCNA/FEN-1 protein interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:238322"
     Site            order(77,80..82,111..117,143,146..147,149..150,173,
                     176..177,179..183)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238322"
     Site            order(208,252..254)
                     /site_type="other"
                     /note="PCNA/RFCL protein interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:238322"
     CDS             1..266
                     /gene="LOC121212680"
                     /coded_by="XM_041085928.1:321..1121"
                     /db_xref="GeneID:121212680"
ORIGIN      
        1 mlelrlvqgs llkkvleaik dlvndanfdc satgfslqam dsshvalval llrsegfehy
       61 rcdrnlsmgm nlnnmskmmk cagnddiiti kaddgsdtvt fmfesptqdk isdfemklmd
      121 idsehlgipe aeyqsivrmp saefarickd lasigdtvvi svtkegvkfs trgdigtani
      181 vlrqnttvdk peeatiiemn epvsltfalr ymnsftkatp lsstvtisls selpvvveyk
      241 iaemghirfy lapkieeded etnpqg
//
LOCUS       XP_040941863             473 aa            linear   PLN 06-AUG-2024
DEFINITION  cytosolic enolase 3 [Gossypium hirsutum].
ACCESSION   XP_040941863
VERSION     XP_040941863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085929.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..473
                     /product="cytosolic enolase 3"
                     /calculated_mol_wt=51252
     Region          20..472
                     /region_name="PLN00191"
                     /note="enolase"
                     /db_xref="CDD:215095"
     CDS             1..473
                     /gene="LOC121212681"
                     /coded_by="XM_041085929.1:305..1726"
                     /db_xref="GeneID:121212681"
ORIGIN      
        1 msvqdyldkh mlsrkiedav naavrakipd pilfisnhmk kavssvitkv karqildsrg
       61 iptvevelft nkgvfrasvp cgdstgmyea velrdgdkgt ylgnavtkav kninekisea
      121 lvgmdptvql qidqamidld ktekkselga nailavsiaa cragaaekev plykhiadls
      181 gktnaiipvp aftvisggkh sgnslpvqdi milptgagrf eealqmgset yhhlkavvte
      241 kygangcnvg edggfvpdis svregldivr eaigrtgynd kikigigvaa tefcigtkyd
      301 lefkspnksg qnfksgedmi qmykdlcidy piasiedpfd kedwehskrf cslglcqvvg
      361 ddllmsnpkr ieraihesac nslllkinqi gtvteavdvv kmakeahwgv vvsqrfgetn
      421 dcfiadlava lgagqikaga pcrgervaky nqllrieqel gdqavyaged wrl
//
LOCUS       XP_016732876             444 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin beta-8 chain [Gossypium hirsutum].
ACCESSION   XP_016732876
VERSION     XP_016732876.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732876.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..444
                     /product="tubulin beta-8 chain"
                     /calculated_mol_wt=49836
     Region          1..431
                     /region_name="PLN00220"
                     /note="tubulin beta chain; Provisional"
                     /db_xref="CDD:215107"
     CDS             1..444
                     /gene="LOC107943613"
                     /coded_by="XM_016877387.2:117..1451"
                     /db_xref="GeneID:107943613"
ORIGIN      
        1 mreilhiqgg qcgnqigakf wevicaehgi dptgryngel dlqlerinvy ynesscgrfv
       61 pravlmdlep gtmdsirsgp vgqifrpdnf vfgqsgagnn wakghytega elidsvldvv
      121 rkeaencdcl qgfqvchslg ggtgsgmgtl liskireeyp drmmltfsvf pspkvsdtvv
      181 epynatlsvh qlvenadecm vldnealydi cfrtlklsnp sfgdlnhlis atmsgvtccl
      241 rfpgqlnsdl rklavnlipf prlhffmvgf apltsrgsqq yqaltvpelt qqmwdaknmm
      301 caadprhgry ltasamfrgk mstkevdeqm lnvqnknssy fvewipnnvk stvcdipptg
      361 lkmastfign stsiqemfrr vseqftamfr rkaflhwytg egmdemefte aesnmndlvs
      421 eyqqyqdatv deeeeyeeeg aeye
//
LOCUS       XP_040941865              98 aa            linear   PLN 06-AUG-2024
DEFINITION  elongin-C [Gossypium hirsutum].
ACCESSION   XP_040941865
VERSION     XP_040941865.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085931.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="elongin-C"
                     /calculated_mol_wt=11064
     Region          6..98
                     /region_name="BTB_POZ_EloC"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in Elongin-C
                     (EloC) and similar proteins; cd18321"
                     /db_xref="CDD:349630"
     Site            order(6,13..20,54..56,59,62..63,66..67,70..71,77..79,
                     83..85,87..88)
                     /site_type="other"
                     /note="elongin B interface [polypeptide binding]"
                     /db_xref="CDD:349630"
     Site            order(32..33,35,37..40,47..49,51..52,91,94..95)
                     /site_type="other"
                     /note="cullin binding site [polypeptide binding]"
                     /db_xref="CDD:349630"
     Site            order(64,68,71,75..76,78..79,81,83,86..87,89..91,93..94,
                     98)
                     /site_type="other"
                     /note="target protein binding site [polypeptide binding]"
                     /db_xref="CDD:349630"
     CDS             1..98
                     /gene="LOC107943614"
                     /coded_by="XM_041085931.1:571..867"
                     /db_xref="GeneID:107943614"
ORIGIN      
        1 mkkedtvkli saegmefvid keaamvsqti rnmltspggf aeaehgevtf peisavilek
       61 icqyfywslq ysrgketefh iepeltlelm maanylht
//
LOCUS       XP_040941866              98 aa            linear   PLN 06-AUG-2024
DEFINITION  elongin-C [Gossypium hirsutum].
ACCESSION   XP_040941866
VERSION     XP_040941866.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085932.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="elongin-C"
                     /calculated_mol_wt=11064
     Region          6..98
                     /region_name="BTB_POZ_EloC"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in Elongin-C
                     (EloC) and similar proteins; cd18321"
                     /db_xref="CDD:349630"
     Site            order(6,13..20,54..56,59,62..63,66..67,70..71,77..79,
                     83..85,87..88)
                     /site_type="other"
                     /note="elongin B interface [polypeptide binding]"
                     /db_xref="CDD:349630"
     Site            order(32..33,35,37..40,47..49,51..52,91,94..95)
                     /site_type="other"
                     /note="cullin binding site [polypeptide binding]"
                     /db_xref="CDD:349630"
     Site            order(64,68,71,75..76,78..79,81,83,86..87,89..91,93..94,
                     98)
                     /site_type="other"
                     /note="target protein binding site [polypeptide binding]"
                     /db_xref="CDD:349630"
     CDS             1..98
                     /gene="LOC107943614"
                     /coded_by="XM_041085932.1:370..666"
                     /db_xref="GeneID:107943614"
ORIGIN      
        1 mkkedtvkli saegmefvid keaamvsqti rnmltspggf aeaehgevtf peisavilek
       61 icqyfywslq ysrgketefh iepeltlelm maanylht
//
LOCUS       XP_016743703             288 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 3 subunit G [Gossypium
            hirsutum].
ACCESSION   XP_016743703
VERSION     XP_016743703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016743703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..288
                     /product="eukaryotic translation initiation factor 3
                     subunit G"
                     /calculated_mol_wt=32064
     Region          33..158
                     /region_name="eIF3g"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     G; pfam12353"
                     /db_xref="CDD:463545"
     Region          208..283
                     /region_name="RRM_eIF3G_like"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     translation initiation factor 3 subunit G (eIF-3G) and
                     similar proteins; cd12408"
                     /db_xref="CDD:409842"
     CDS             1..288
                     /gene="LOC107952990"
                     /coded_by="XM_016888214.2:117..983"
                     /db_xref="GeneID:107952990"
ORIGIN      
        1 mateatkqtk frwadiednd aedltyllpp kevigpdkng ikkvieykfn eegkqvrvtt
       61 tirvrkmavd spskeriler rswakfgsam gdedddsrlt mvsteeisle rrgskveepk
      121 vaaehslaqq akngavlmlc rtcgkkgdhw tarcpykdqa pppangtvdk ppasetssgk
      181 tayvppskrg agakrngtdm khrdeentir ftnlsedame sdlrelvapf gpvsrvhvgi
      241 drktgmcrgf gyvnfvkked aeravlklng ygydslilrv ewadprtn
//
LOCUS       XP_040941867             277 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At1g07440 [Gossypium hirsutum].
ACCESSION   XP_040941867
VERSION     XP_040941867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085933.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..277
                     /product="tropinone reductase homolog At1g07440"
                     /calculated_mol_wt=29338
     Region          12..263
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(24,26..27,29,48..50,102..104,152..154,167,171,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(126,154,167,171)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..277
                     /gene="LOC121212682"
                     /coded_by="XM_041085933.1:106..939"
                     /db_xref="GeneID:121212682"
ORIGIN      
        1 mgeaegcskd krwslqgmta lvtggtkgig haiveelagl gaivhtcsrt etelndclle
       61 wkakgfrvtg svcdvsnqaq renllstvss vfngrlnili nnvgtnigkm vtdytaedvs
      121 fltstnfesa ykisvlahpl lkasaaasvv fissivgalp iytapilgat keamnhlakf
      181 lacdwagdni rvnvvapavi ktplsqrffe gneeglktai srtplgrlge pkevsamvaf
      241 lclpaasyvt gqliyvdggm tvnglcfpnq ttkqhep
//
LOCUS       XP_040941868             271 aa            linear   PLN 06-AUG-2024
DEFINITION  methylsterol monooxygenase 2-2 [Gossypium hirsutum].
ACCESSION   XP_040941868
VERSION     XP_040941868.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085934.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..271
                     /product="methylsterol monooxygenase 2-2"
                     /calculated_mol_wt=31299
     Region          112..247
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; pfam04116"
                     /db_xref="CDD:397991"
     CDS             1..271
                     /gene="LOC107944828"
                     /coded_by="XM_041085934.1:170..985"
                     /db_xref="GeneID:107944828"
ORIGIN      
        1 masiiesgwl ylithfsdfq lasmgsfllh esvfflsglp fiyleragll skykiqtknn
       61 tptaqekcit rlllyhfsvn lplmivsypv frcmgmrssl plpswkvvlt qiifyfiled
      121 fvfywghrvl htkwlykhvh svhheyatpf gltseyahpa eilflgfati vgpaitgphl
      181 itlwlwmvlr vletveahcg yhfpwslsnf lplyggadfh dyhhrllytk sgnysstfiy
      241 mdwifgtdkg yrklkalkhn gvgveddskq t
//
LOCUS       XP_040941869             269 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At2g29290 [Gossypium hirsutum].
ACCESSION   XP_040941869
VERSION     XP_040941869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085935.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..269
                     /product="tropinone reductase homolog At2g29290"
                     /calculated_mol_wt=28805
     Region          12..263
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(24,26..27,29,48..50,102..104,152..154,167,171,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187590"
     Site            order(126,154,167,171)
                     /site_type="active"
                     /db_xref="CDD:187590"
     CDS             1..269
                     /gene="LOC121212683"
                     /coded_by="XM_041085935.1:102..911"
                     /db_xref="GeneID:121212683"
ORIGIN      
        1 mdeadgfskd krwnlqgmta ivtggtkgig yaiveelagl garvhtcsrt itelndclle
       61 wkakgfrvtg svcdvsnqaq rekllnavss efngklnilv nnvgismgkp vsdytaedis
      121 kltsinfesa ynisvlahpl lkaspstsiv fissvagilp vsfapiygan kgamnhlaky
      181 lacdwagdni rvntiapgvi ktplseqffd ekderlketi nrtplgrlgq pkevsamvaf
      241 lclpaasylt gqiicvdggm tvndlnfpk
//
LOCUS       XP_040941870             277 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At5g06060 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941870
VERSION     XP_040941870.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085936.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..277
                     /product="tropinone reductase homolog At5g06060 isoform
                     X1"
                     /calculated_mol_wt=29509
     Region          12..263
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(24,26..27,29,48..50,102..104,152..154,167,171,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(126,154,167,171)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..277
                     /gene="LOC107944114"
                     /coded_by="XM_041085936.1:103..936"
                     /db_xref="GeneID:107944114"
ORIGIN      
        1 mgeaegcskd krwslhgmta lvtggtkgig haiveelaaf gaivhtcsrt etelndclle
       61 wkakglrvtg svcdvsnqaq renllntvss efngklnili nnvgtniwkm vtdytaedvs
      121 fltstnfesa ynisvlahpl lkasaaasvv fissiagtlp vfntaiygan kgamdhlskf
      181 lacdwagdni rvnaiapali ktplsqrffe dneegknaii srtplgrage pkevsamvaf
      241 lclpaasyvt gqlifvdggi tvnglcfpnq itkqhep
//
LOCUS       XP_040941871             276 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At1g07440 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941871
VERSION     XP_040941871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085937.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="tropinone reductase homolog At1g07440 isoform
                     X2"
                     /calculated_mol_wt=29954
     Region          28..262
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(28,47..49,101..103,151..153,166,170,196..199)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(125,153,166,170)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..276
                     /gene="LOC107944114"
                     /coded_by="XM_041085937.1:114..944"
                     /db_xref="GeneID:107944114"
ORIGIN      
        1 messrhdctc hrwyqrhrvl sssysikigh aiveelaafg aivhtcsrte telndcllew
       61 kakglrvtgs vcdvsnqaqr enllntvsse fngklnilin nvgtniwkmv tdytaedvsf
      121 ltstnfesay nisvlahpll kasaaasvvf issiagtlpv fntaiygank gamdhlskfl
      181 acdwagdnir vnaiapalik tplsqrffed neegknaiis rtplgragep kevsamvafl
      241 clpaasyvtg qlifvdggit vnglcfpnqi tkqhep
//
LOCUS       XP_040941872             327 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At1g07440 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941872
VERSION     XP_040941872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085938.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..327
                     /product="tropinone reductase homolog At1g07440 isoform
                     X1"
                     /calculated_mol_wt=35941
     Region          57..308
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(69,71..72,74,93..95,147..149,197..199,212,216,
                     242..245)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(171,199,212,216)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..327
                     /gene="LOC121212684"
                     /coded_by="XM_041085938.1:16..999"
                     /db_xref="GeneID:121212684"
ORIGIN      
        1 mlnlinrlis inichilery nryigphwlp kmlrygqerk klsskmgete gcskhkrwsl
       61 qgmtalvtgg tkgighaive elaglgaivh tcsrteteln dcllewkakg frvtgsvcdv
      121 snqaqrenll ntvssqfngk lnilinnvgt niaktvmdyt tedvsfltst nfesaynisv
      181 lahplliasg agsivfissi agitpaylmp iygankgamn qiakflacdw ardnirvniv
      241 tpgviktpht lpyfegnkel lettmsrtpl arfgkpeevs amvaflclpa asyvtgqlic
      301 vdggmtvngi yfpkqirkhh epcyrik
//
LOCUS       XP_040941873             218 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At1g07440 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941873
VERSION     XP_040941873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085939.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="tropinone reductase homolog At1g07440 isoform
                     X2"
                     /calculated_mol_wt=23808
     Region          57..>216
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(171,199,212,216)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..218
                     /gene="LOC121212684"
                     /coded_by="XM_041085939.1:16..672"
                     /db_xref="GeneID:121212684"
ORIGIN      
        1 mlnlinrlis inichilery nryigphwlp kmlrygqerk klsskmgete gcskhkrwsl
       61 qgmtalvtgg tkgighaive elaglgaivh tcsrteteln dcllewkakg frvtgsvcdv
      121 snqaqrenll ntvssqfngk lnilinnvgt niaktvmdyt tedvsfltst nfesaynisv
      181 lahplliasg agsivfissi agitpaylmp iygankvf
//
LOCUS       XP_040941874             276 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At5g06060 [Gossypium hirsutum].
ACCESSION   XP_040941874
VERSION     XP_040941874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085940.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="tropinone reductase homolog At5g06060"
                     /calculated_mol_wt=29298
     Region          12..262
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(24,26..27,29,48..50,102..104,152..154,167,171,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(126,154,167,171)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..276
                     /gene="LOC107944113"
                     /coded_by="XM_041085940.1:122..952"
                     /db_xref="GeneID:107944113"
ORIGIN      
        1 mgeaegcskd krwslqgmta lvtggtkgig naiveelaaf gaivhtcsrt etelndclle
       61 wkakglrvtg svcdvsnqaq renllntvss efngklnili nnvgtnigkm vtdytaedvs
      121 fltstnfesa ynisvlahpl lkasaaasvv fissiagtlp vfntsiygvn kvamdhlskf
      181 lacdwagdni rvntiapali ktplsqrfsk dkeginaiis rtplgragep kevsamvafl
      241 clpaasyvtg qlifvdggit vnglcfpnqi tkhhel
//
LOCUS       XP_040941875             276 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At1g07440 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941875
VERSION     XP_040941875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085941.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="tropinone reductase homolog At1g07440 isoform
                     X1"
                     /calculated_mol_wt=29447
     Region          19..270
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(31,33..34,36,55..57,109..111,159..161,174,178,
                     204..207)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(133,161,174,178)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..276
                     /gene="LOC121212685"
                     /coded_by="XM_041085941.1:421..1251"
                     /db_xref="GeneID:121212685"
ORIGIN      
        1 mnvskmgeag vfskmessrw slqgmtalvt ggtkglghai veelagfgav vhtcsrtete
       61 lnncllewka kgfrvtgsvc dvsdqtqren llntvssefn gklnilinnv gvstsksvtd
      121 ytaedvsflt stnfesayni svlaypllka sgagsivfms smgsllpayf gaiyasnkaa
      181 mnqlakylsc dwardnirvn aivpsvvkta llekyfevnk eglevtlnrt plgrlgqpke
      241 vsamvaflcl paasyitgqv icvdggmsvn glffpk
//
LOCUS       XP_040941876             261 aa            linear   PLN 06-AUG-2024
DEFINITION  tropinone reductase homolog At1g07440 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941876
VERSION     XP_040941876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085942.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..261
                     /product="tropinone reductase homolog At1g07440 isoform
                     X2"
                     /calculated_mol_wt=28491
     Region          23..255
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(118,146,159,163)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..261
                     /gene="LOC121212685"
                     /coded_by="XM_041085942.1:16..801"
                     /db_xref="GeneID:121212685"
ORIGIN      
        1 messrhdctc ywwnqrarwk cmhaiveela gfgavvhtcs rtetelnncl lewkakgfrv
       61 tgsvcdvsdq tqrenllntv ssefngklni linnvgvsts ksvtdytaed vsfltstnfe
      121 saynisvlay pllkasgags ivfmssmgsl lpayfgaiya snkaamnqla kylscdward
      181 nirvnaivps vvktalleky fevnkeglev tlnrtplgrl gqpkevsamv aflclpaasy
      241 itgqvicvdg gmsvnglffp k
//
LOCUS       XP_016731600             863 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine repetitive matrix protein 1 [Gossypium hirsutum].
ACCESSION   XP_016731600
VERSION     XP_016731600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876111.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..863
                     /product="serine/arginine repetitive matrix protein 1"
                     /calculated_mol_wt=99965
     Region          46..116
                     /region_name="PWI"
                     /note="PWI domain; pfam01480"
                     /db_xref="CDD:460224"
     Region          <478..631
                     /region_name="PHA03309"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:165564"
     CDS             1..863
                     /gene="LOC107942448"
                     /coded_by="XM_016876111.2:316..2907"
                     /db_xref="GeneID:107942448"
ORIGIN      
        1 msggffrgts adqdtrfsnk qakllksqkf apelehlvdm tkvkmdvirp wiatrvtell
       61 gfedevlinf iyglldgkev ngkqvqislt gfmekntgkf mkelwsllls aqrnasgvpq
      121 qfldakeeet rkkkaesdri aneiqkkkdk eireneqdrl rkmddgdeik agdseldpss
      181 knmlptkgsr arpeeerdad qrngvgrnrs rsqsvsrsfs nsrsysdgkq kfrsvsrspe
      241 arrrsvssdr mhpsprrrss tprsrhspsf srspvrrrps yyrrrsperr rpsysrrrsq
      301 srspyrrgsp tpvrrrsrsp yrrrsptpvh rrsrspirry rspspitrrr splsirrrrs
      361 pslvrrrrsp spmlhgsrsp vrrrspspir rksplpvrrr spsplrrrsp ppmrrrspsp
      421 vqqrhrrsss prqrrsppss rrsvtpsrgk spspyqsssm spvqrrsssp vrrspkgqrs
      481 sslspggqrm rrklspvghn hssmrstrsd rmdqsdtddk vpglspppnk splskspshv
      541 rnrsgsedrr ssspygsppr qrkariardd sfspewksre lkghrdgqgt grrnetsesr
      601 hsppisrqrv sprkvhtper lagsrstdsr srldnvesrk kdletkrrss gevvhsgtpd
      661 rqrspaised sfqgekqsrs rlregkrsde rsrshkntkd sdehhkvets pmllekvdyn
      721 nrgsdsdskg sdkrrtkhkd gkrkhkrser rkvtsdddds sydseiddrk eakrrkkeek
      781 rlrkeekrkr seerrrkrea rraeklktkr hdddsssdge hagtgkfrpd ddeeeaeteq
      841 kkleielrkk aleslkakkg ish
//
LOCUS       XP_016731602             803 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TOC75-3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016731602
VERSION     XP_016731602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..803
                     /product="protein TOC75-3, chloroplastic"
                     /calculated_mol_wt=88141
     Region          112..803
                     /region_name="PLN03138"
                     /note="Protein TOC75; Provisional"
                     /db_xref="CDD:215598"
     CDS             1..803
                     /gene="LOC107942449"
                     /coded_by="XM_016876113.2:179..2590"
                     /db_xref="GeneID:107942449"
ORIGIN      
        1 mhslvaasll lpsstrrqlp psppsssras srattikcrf asgndeprnp tsflrslskp
       61 valasasaat lliritpift llpggggnnc ggsggggfsg ggggnnggdg nfweklfsps
      121 paiaddnnqn qewdshglpa nivvqlnkls gfkkyklsei lffdrrrwtt vgtedsffem
      181 vslrpggiyt ktqlqkelet latcgmfekv dmegktnpdg tlgltisfae stwqsadrfr
      241 cinvglmaqs kpiemdpdmt dkekleyyks qekdykrrie rarpcllpmq vhrevlqmlr
      301 dqgkvsarll qkirdrvqkw yhdegyacaq vvnfgnlntk evvcevvegd itqlviqfqd
      361 klgnviegnt qlpvvrrelp rqlrqgnvfn ieagkqalrn inslalfsni evnpqpdekn
      421 eggiiveikl keldqksaev ssewsivpgr ggrptlaslq pggtvsfehr nlkglnrsil
      481 gslttsnffn pqddlafkle yvhpyldgvy nprnrtlran cfnsrklspv ftggpgvdev
      541 ppiwvdragv kfnitenftr qskftyglvm eeittrdess hispngqrvl psggisadgp
      601 pttlsgtgvd rmaflqanit rdntkfvnga ivgernvfqv dqglgigtkf plfnrhqlti
      661 trflqlkqve egagkspppv lvlhghyggc vgdlpsydaf tlggpysvrg ynmgelgaar
      721 nilelgaeir ipvrnthvya faehgndlgs skdvkgnpte vyrrmghgss ygvgvklglv
      781 raeyavdhnn gtgavffrfg ery
//
LOCUS       XP_016731606             275 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SDIR1 [Gossypium hirsutum].
ACCESSION   XP_016731606
VERSION     XP_016731606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="E3 ubiquitin-protein ligase SDIR1"
                     /calculated_mol_wt=30491
     Region          212..254
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..275
                     /gene="LOC107942453"
                     /coded_by="XM_016876117.2:353..1180"
                     /db_xref="GeneID:107942453"
ORIGIN      
        1 msfvfrgsrg diesgfsgfi herpavriha srpvnsnsla ffvtvlllfm ilnshqmspn
       61 fllwlvvgif lmatslrmya tcqqlqaqar ahaaaasgll ghtelrlhmp psiafatrgr
      121 lqglrlqlal ldrefddldy dtlralddnt stshsmseed inalpvhkyk vhglesagss
      181 lqqassssvt ieqkqdswkg dgnmkasdde ltcsicldqv negelvrslp clhqfhttci
      241 dpwlrqqgtc pvckfrmgsg wqenresesd dsdmv
//
LOCUS       XP_016731608             275 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SDIR1 [Gossypium hirsutum].
ACCESSION   XP_016731608
VERSION     XP_016731608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..275
                     /product="E3 ubiquitin-protein ligase SDIR1"
                     /calculated_mol_wt=30491
     Region          212..254
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..275
                     /gene="LOC107942453"
                     /coded_by="XM_016876119.2:254..1081"
                     /db_xref="GeneID:107942453"
ORIGIN      
        1 msfvfrgsrg diesgfsgfi herpavriha srpvnsnsla ffvtvlllfm ilnshqmspn
       61 fllwlvvgif lmatslrmya tcqqlqaqar ahaaaasgll ghtelrlhmp psiafatrgr
      121 lqglrlqlal ldrefddldy dtlralddnt stshsmseed inalpvhkyk vhglesagss
      181 lqqassssvt ieqkqdswkg dgnmkasdde ltcsicldqv negelvrslp clhqfhttci
      241 dpwlrqqgtc pvckfrmgsg wqenresesd dsdmv
//
LOCUS       XP_040941877             577 aa            linear   PLN 06-AUG-2024
DEFINITION  laccase-2 [Gossypium hirsutum].
ACCESSION   XP_040941877
VERSION     XP_040941877.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085943.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..577
                     /product="laccase-2"
                     /calculated_mol_wt=63591
     Region          36..577
                     /region_name="laccase"
                     /note="plant; TIGR03389"
                     /db_xref="CDD:274556"
     CDS             1..577
                     /gene="LOC107942446"
                     /coded_by="XM_041085943.1:98..1831"
                     /db_xref="GeneID:107942446"
ORIGIN      
        1 mrfsgflssa vmvilfvgcf mavpevvtak hgggvtrhyk fsirmknitr lcrsksivtv
       61 ngkfpgprvv aregdrlvvk vvnhvpnnis ihwhgirqlr sgwadgpayi tqcpiqtgqs
      121 yvynftitgq rgtllwhahf swmrasvygp liilprrnes ypfikpykev pilfgewfna
      181 dpeavinqsl qtgagpnvsd aytlnglpgp lyncsgkdty klkvkpgkty llrlinaaln
      241 delffsianh svtvveadas yvkpfvtdtl viapgqttnv llktkspapd aafymlarpy
      301 ftgmgtfdnt tvagileyen pknpenaplf kpslpainat nvvanfsnmf kslatnkfpi
      361 nvpqkvdkrf fftiglgtnp cpknqtcqgp ngtkfaasmn nisfalptta llqsyffsks
      421 gvftadfpdf plhpfnytgt ppnnthving ttkvevlpfn asvevimqdt silgaeshpl
      481 hlhgynfyvv gqgfgnfnpk ndpskfnlvd pverntvgvp sggwvairfq adnpgvwlmh
      541 chfdvhlswg lrmawivldg klpnqklppp psdlpkc
//
LOCUS       XP_040941878             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941878
VERSION     XP_040941878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085944.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17251
     CDS             1..156
                     /gene="LOC107929760"
                     /coded_by="XM_041085944.1:323..793"
                     /db_xref="GeneID:107929760"
ORIGIN      
        1 mlsspplkss qafsfpvksr slshrrwsrr hrrwpphmva gsskvsissl llaryggarh
       61 agmvlaeawg vvadmvvtkd gasvrgkwgv vakvscclfl ffyyvglvey waggiwamgf
      121 gllglnfgfv vfyfiwtmgp anlgfytyhl yidisg
//
LOCUS       XP_040941879             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941879
VERSION     XP_040941879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085945.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17181
     CDS             1..156
                     /gene="LOC121212686"
                     /coded_by="XM_041085945.1:42..512"
                     /db_xref="GeneID:121212686"
ORIGIN      
        1 mlsspplkss qafsfpvksr slshrrwsrr hrrwpphmva gsskvsissl llaryggarh
       61 agmvlaeawg vvadmvvtkd gasvrgkwgv vakvscclfl fffyyvglve ywaggiwamg
      121 fgllglnfgf vvfyfiwtmg panlgfyscp sllvfv
//
LOCUS       XP_016743679             110 aa            linear   PLN 06-AUG-2024
DEFINITION  vitellogenin-2 [Gossypium hirsutum].
ACCESSION   XP_016743679
VERSION     XP_016743679.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016743679.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="vitellogenin-2"
                     /calculated_mol_wt=11907
     Region          85..103
                     /region_name="DVL"
                     /note="DVL family; pfam08137"
                     /db_xref="CDD:462367"
     CDS             1..110
                     /gene="LOC107952975"
                     /coded_by="XM_016888190.2:95..427"
                     /db_xref="GeneID:107952975"
ORIGIN      
        1 mddkyrktsk keasssvnns sskrssslpr sfsaktttaa attaecllrs ssqknpcsss
       61 sssslprscs qksssisrkc snlakkqkar fyimrrcvam lvcwhkhgds
//
LOCUS       XP_016731598             512 aa            linear   PLN 06-AUG-2024
DEFINITION  factor of DNA methylation 4 [Gossypium hirsutum].
ACCESSION   XP_016731598
VERSION     XP_016731598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..512
                     /product="factor of DNA methylation 4"
                     /calculated_mol_wt=60205
     Region          1..110
                     /region_name="XS"
                     /note="XS domain; pfam03468"
                     /db_xref="CDD:460933"
     Region          <113..>371
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          380..511
                     /region_name="XH"
                     /note="XH domain; pfam03469"
                     /db_xref="CDD:460934"
     CDS             1..512
                     /gene="LOC107942441"
                     /coded_by="XM_016876109.2:305..1843"
                     /db_xref="GeneID:107942441"
ORIGIN      
        1 mfvypwkgii anipttlqdg khvgesgrkl redlakkgfn plkvqplwnr hghsgyaive
       61 fnkewdgfnn aimfeksfel dhygkkdyys srrkkdklya wvareddyys ggligeylrr
      121 ngdlktvssk eaedlrktsk llttlnntle tknqrlqemq nkfnevsssm stlmwqkddm
      181 irayneeckk mqenahnhfk qisleherna kcildqkrel eqrekellqr eaqnenetkk
      241 lqhekmmner aaleqkkade tmfklakehk rdkeklhrei iklekqldtr qgleleiqrl
      301 rgallvmehm ngdgdadtkk rmgviqdelk ekeeeledle dlnqaliike rksndelqda
      361 rkelitafkd vstrahigvk kmgevdirpf lvaakrkysa keadvksael cslwqdylrd
      421 pswhpfkilt dkegnckeil deedeklvel ktelgdeayd avttalkqmn eynpsgryiv
      481 pelwnfnegr katltevvqh llnkwklhkr rr
//
LOCUS       XP_040941880             512 aa            linear   PLN 06-AUG-2024
DEFINITION  factor of DNA methylation 4 [Gossypium hirsutum].
ACCESSION   XP_040941880
VERSION     XP_040941880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085946.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..512
                     /product="factor of DNA methylation 4"
                     /calculated_mol_wt=60205
     Region          1..110
                     /region_name="XS"
                     /note="XS domain; pfam03468"
                     /db_xref="CDD:460933"
     Region          <113..>371
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          380..511
                     /region_name="XH"
                     /note="XH domain; pfam03469"
                     /db_xref="CDD:460934"
     CDS             1..512
                     /gene="LOC107942441"
                     /coded_by="XM_041085946.1:200..1738"
                     /db_xref="GeneID:107942441"
ORIGIN      
        1 mfvypwkgii anipttlqdg khvgesgrkl redlakkgfn plkvqplwnr hghsgyaive
       61 fnkewdgfnn aimfeksfel dhygkkdyys srrkkdklya wvareddyys ggligeylrr
      121 ngdlktvssk eaedlrktsk llttlnntle tknqrlqemq nkfnevsssm stlmwqkddm
      181 irayneeckk mqenahnhfk qisleherna kcildqkrel eqrekellqr eaqnenetkk
      241 lqhekmmner aaleqkkade tmfklakehk rdkeklhrei iklekqldtr qgleleiqrl
      301 rgallvmehm ngdgdadtkk rmgviqdelk ekeeeledle dlnqaliike rksndelqda
      361 rkelitafkd vstrahigvk kmgevdirpf lvaakrkysa keadvksael cslwqdylrd
      421 pswhpfkilt dkegnckeil deedeklvel ktelgdeayd avttalkqmn eynpsgryiv
      481 pelwnfnegr katltevvqh llnkwklhkr rr
//
LOCUS       XP_016731599             512 aa            linear   PLN 06-AUG-2024
DEFINITION  factor of DNA methylation 4 [Gossypium hirsutum].
ACCESSION   XP_016731599
VERSION     XP_016731599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..512
                     /product="factor of DNA methylation 4"
                     /calculated_mol_wt=60205
     Region          1..110
                     /region_name="XS"
                     /note="XS domain; pfam03468"
                     /db_xref="CDD:460933"
     Region          <113..>371
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          380..511
                     /region_name="XH"
                     /note="XH domain; pfam03469"
                     /db_xref="CDD:460934"
     CDS             1..512
                     /gene="LOC107942441"
                     /coded_by="XM_016876110.2:292..1830"
                     /db_xref="GeneID:107942441"
ORIGIN      
        1 mfvypwkgii anipttlqdg khvgesgrkl redlakkgfn plkvqplwnr hghsgyaive
       61 fnkewdgfnn aimfeksfel dhygkkdyys srrkkdklya wvareddyys ggligeylrr
      121 ngdlktvssk eaedlrktsk llttlnntle tknqrlqemq nkfnevsssm stlmwqkddm
      181 irayneeckk mqenahnhfk qisleherna kcildqkrel eqrekellqr eaqnenetkk
      241 lqhekmmner aaleqkkade tmfklakehk rdkeklhrei iklekqldtr qgleleiqrl
      301 rgallvmehm ngdgdadtkk rmgviqdelk ekeeeledle dlnqaliike rksndelqda
      361 rkelitafkd vstrahigvk kmgevdirpf lvaakrkysa keadvksael cslwqdylrd
      421 pswhpfkilt dkegnckeil deedeklvel ktelgdeayd avttalkqmn eynpsgryiv
      481 pelwnfnegr katltevvqh llnkwklhkr rr
//
LOCUS       XP_040941881             460 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase PCRK1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941881
VERSION     XP_040941881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085947.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..460
                     /product="serine/threonine-protein kinase PCRK1 isoform
                     X1"
                     /calculated_mol_wt=51803
     Region          101..386
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(101..104,107,109,131,133,162,182..185,236,240..241,
                     243,253..254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..460
                     /gene="LOC107942450"
                     /coded_by="XM_041085947.1:170..1552"
                     /db_xref="GeneID:107942450"
ORIGIN      
        1 mvmkcfhftn gegrdegedv sggggvvsrm sskvtwtrsl svasssadtr rsefdsestr
       61 dfasaasfce fltqrrandl rvftfaelks atrgfsrall igeggfgcvy rgtvdvsdev
      121 nggryskldv aikqlnrhgf qgdkewinev nflgvvnhpn lvrligycae dderaiqrll
      181 vyelmrnksl edrllartpl plpplpwvtr lsiaqdaarg laylheemdf qlifrdfkts
      241 nilldddfna klsdfglarq gppegfghvs tavvgtvgyt apeyvqtgrl taksdvwsfg
      301 vvlyelitgr rvlernlprs eqkllewvrp yisdskkfhl ivdprlegqy clksarklas
      361 lankclmkns ksrpkmsevv emlgniiset ssqyelisqp igenedvkee sevqtevest
      421 kqghnylkkv feikeiislr nrsvgkldwr nwtpglvrtw
//
LOCUS       XP_040941882             345 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase PCRK1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941882
VERSION     XP_040941882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085948.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="serine/threonine-protein kinase PCRK1 isoform
                     X2"
                     /calculated_mol_wt=39222
     Region          27..271
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..345
                     /gene="LOC107942450"
                     /coded_by="XM_041085948.1:490..1527"
                     /db_xref="GeneID:107942450"
ORIGIN      
        1 mkltavviqs wtsplnsliv tvssmqgdke winevnflgv vnhpnlvrli gycaeddera
       61 iqrllvyelm rnksledrll artplplppl pwvtrlsiaq daarglaylh eemdfqlifr
      121 dfktsnilld ddfnaklsdf glarqgppeg fghvstavvg tvgytapeyv qtgrltaksd
      181 vwsfgvvlye litgrrvler nlprseqkll ewvrpyisds kkfhlivdpr legqyclksa
      241 rklaslankc lmknsksrpk msevvemlgn iisetssqye lisqpigene dvkeesevqt
      301 evestkqghn ylkkvfeike iislrnrsvg kldwrnwtpg lvrtw
//
LOCUS       XP_040941883             402 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL10 [Gossypium
            hirsutum].
ACCESSION   XP_040941883
VERSION     XP_040941883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085949.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..402
                     /product="probable serine/threonine-protein kinase PBL10"
                     /calculated_mol_wt=44421
     Region          74..353
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(74..78,82,104,106,135,151..154,158,160,203,205,
                     207..208,210,221,224,242..245)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(74..78,82,104,106,135,151..154,158,203,205,207..208,
                     210,221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(78,158,160,203,205,207,224,242..245)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(220..227,238..245)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..402
                     /gene="LOC107942451"
                     /coded_by="XM_041085949.1:342..1550"
                     /db_xref="GeneID:107942451"
ORIGIN      
        1 mgiclsarik aespnntgls snyvsgdtss kvssvsmplt prsegeilqc tnlksfsfan
       61 lktatrnfrp dsvlgeggfg svfkgwiden sfnaskpgtg iviavkrlnq egfqghkewl
      121 aevnylgqly hpnlvkligy csedehrmlv yefmprgsle nhlfrrgsyf qplswdlrmk
      181 valgaakgla flhsaeikvi yrdfktsnvl ldsnynakls dfglakdgpt gdkshvstrv
      241 mgtygyaape ylatghltak sdvysfgvvl lemlssrrav dknrpsgehs lvdwakpyla
      301 nkrkmfrvld srlegqysme gafkvatlal rcisiepkfr prmnevvivl eqlqnsnesg
      361 snlsnntsst prirrrsaey psggrstttt ayprpsaspl yd
//
LOCUS       XP_016732891             219 aa            linear   PLN 06-AUG-2024
DEFINITION  methyl-CpG-binding domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016732891
VERSION     XP_016732891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="methyl-CpG-binding domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=23712
     Region          77..>126
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Site            order(85,87,89,97,99,109,112,116)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     CDS             1..219
                     /gene="LOC107943631"
                     /coded_by="XM_016877402.2:53..712"
                     /db_xref="GeneID:107943631"
ORIGIN      
        1 msdpvqtspa dlpsdpllkp gafidvnger kpaeptkarn gsipngsqpe tpsrgsvnss
       61 ssadskvkrr vvapetwlpp gwliedrvrt sgataglvdk yyvdptsgrk frskkevlyf
      121 lengspppkr kkgtelpgse vpstgnspgq kqkksakkqk plnfdfinvp ekvdwiltda
      181 cldswtpflg ndlvpestkq dwataftsla vkkssqamf
//
LOCUS       XP_016732893             169 aa            linear   PLN 06-AUG-2024
DEFINITION  methyl-CpG-binding domain-containing protein 6 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016732893
VERSION     XP_016732893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..169
                     /product="methyl-CpG-binding domain-containing protein 6
                     isoform X2"
                     /calculated_mol_wt=18313
     Region          77..>126
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Site            order(85,87,89,97,99,109,112,116)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     CDS             1..169
                     /gene="LOC107943631"
                     /coded_by="XM_016877404.2:52..561"
                     /db_xref="GeneID:107943631"
ORIGIN      
        1 msdpvqtspa dlpsdpllkp gafidvnger kpaeptkarn gsipngsqpe tpsrgsvnss
       61 ssadskvkrr vvapetwlpp gwliedrvrt sgataglvdk yyvdptsgrk frskkevlyf
      121 lengspppkr kkgtelpgse vpvsqkqkai lqetlpaknr rsllknrsr
//
LOCUS       XP_016732902             510 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase [Gossypium hirsutum].
ACCESSION   XP_016732902
VERSION     XP_016732902.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877413.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..510
                     /product="glucan endo-1,3-beta-glucosidase"
                     /calculated_mol_wt=54731
     Region          32..344
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          383..467
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..510
                     /gene="LOC107943638"
                     /coded_by="XM_016877413.2:137..1669"
                     /db_xref="GeneID:107943638"
ORIGIN      
        1 mavlsatkll iffffschls ifsstatavy tigvnygtia dnlptptqva kflksktnid
       61 rikifdtnpd ilkafagtgi svtvtvgngd ipslaklpga kawieknilp yhpktiiryi
      121 avgneilats dktliayllp amkalrsald sanatsvkvs tphslgilst seppsagkfr
      181 kgydklifap ilefhkrtks pfmvnpypyf gfkpqtldya lfkpnggvfd agtginytnm
      241 fdaqldavyt amkrvgyedv divvaetgwp svgdpgqpgv slenalsyng nlikhvdsgk
      301 gtplmpnrtf etyifalfne nlkesvpern fglfkpdlnp vydvgilrse qgmaptsapt
      361 tatapsaata psagkapssg sgkwcvaksn asdaalqani dyvcssgvdc kpiqsggacf
      421 npnnvkshas yamnayyqan grhdfncdfn rtgvitstdp shaacnysvn qgsglkless
      481 vaantmrfsa vwhvislatl sycmifirfy
//
LOCUS       XP_016732894              93 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import inner membrane translocase subunit TIM9
            [Gossypium hirsutum].
ACCESSION   XP_016732894
VERSION     XP_016732894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..93
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM9"
                     /calculated_mol_wt=10701
     Region          27..84
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..93
                     /gene="LOC107943632"
                     /coded_by="XM_016877405.2:145..426"
                     /db_xref="GeneID:107943632"
ORIGIN      
        1 mdknmlaale glpeedkarm samidhlqlr dslrmynslv ercftdcidn ftrktlqkqe
       61 etcvtrcaek flkhsmrvgm rfaelnsqap tqd
//
LOCUS       XP_016732899             836 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 33 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016732899
VERSION     XP_016732899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877410.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..836
                     /product="U-box domain-containing protein 33 isoform X1"
                     /calculated_mol_wt=93493
     Region          46..196
                     /region_name="USP_STK_Ubox_N"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; cd01989"
                     /db_xref="CDD:467493"
     Region          <308..>448
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          498..758
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(498..501,504,506,517,519,548,562..565,614,618..619,
                     621,631..632)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Region          767..822
                     /region_name="RING-Ubox_WDSUB1-like"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; cd16655"
                     /db_xref="CDD:438317"
     CDS             1..836
                     /gene="LOC107943636"
                     /coded_by="XM_016877410.2:251..2761"
                     /db_xref="GeneID:107943636"
ORIGIN      
        1 melhnpahrd sipgprfrpr vdrpantqfp esaeetggfn agekdkvfia vgksveravn
       61 llqwtlkrfg gkhicllhvh qpspliptll gklpasqans rvlsayrkde keqlkkllen
      121 ysnfprkfkv hisivtiean qvhkgivqlv krhgirnlvm gaipencmsm kkssskssya
      181 akyvpcfcdi wfvdkgklvw treaseepcl stpasqaavt akssrsnslp hrnsdslvhp
      241 dnlrsnsclt itfaasstql tesivaqtdv slsprlssfs nlssprftng skcassemrl
      301 sldsyskded enlyrqlgea smeakaskne alaeslkrqk leleameain kikdlesarv
      361 hevklrekae ealratvqer eklikekeea meelqrttrn vtllngcvqe anckhdevag
      421 klkliqasim tlreekqrir rqkleavrwl erwrsrgqag attcngfigi vedlpelaef
      481 sladvqtatc nfsesfkigk gghgcvykge mlgrtvaikk lyphnmqgqs efqqeaqvls
      541 klqhphlvtl lgvcpeawsl vyeyvpngsl qdrlfrktsv spltwkirar ivaeissalc
      601 flhsakpeki vhgdlkpeni lldselscki cdfgisrlvt ednlycpsfh cstepkgafp
      661 ysdpefqrig vptpksdiya fgliilqvlt rrppvglage vrkaissgkl alildksage
      721 wpmfvarrlv dlglqccesy grdrpdlkps lvrelgqlhv teerpvpsff lcpilqeimh
      781 dpqvaadgft yegealrgwl engretspmt nlklshlhlt pnhairqaiq nwlcka
//
LOCUS       XP_016732900             817 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 33 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016732900
VERSION     XP_016732900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877411.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..817
                     /product="U-box domain-containing protein 33 isoform X2"
                     /calculated_mol_wt=91393
     Region          46..177
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     Region          <288..>429
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          479..739
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(479..482,485,487,498,500,529,543..546,595,599..600,
                     602,612..613)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Region          748..803
                     /region_name="RING-Ubox_WDSUB1-like"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; cd16655"
                     /db_xref="CDD:438317"
     CDS             1..817
                     /gene="LOC107943636"
                     /coded_by="XM_016877411.2:224..2677"
                     /db_xref="GeneID:107943636"
ORIGIN      
        1 melhnpahrd sipgprfrpr vdrpantqfp esaeetggfn agekdkvfia vgksveravn
       61 llqwtlkrfg vgklpasqan srvlsayrkd ekeqlkklle nysnfprkfk vhisivtiea
      121 nqvhkgivql vkrhgirnlv mgaipencms mkkssskssy aakyvpcfcd iwfvdkgklv
      181 wtreaseepc lstpasqaav takssrsnsl phrnsdslvh pdnlrsnscl titfaasstq
      241 ltesivaqtd vslsprlssf snlssprftn gskcassemr lsldsyskde denlyrqlge
      301 asmeakaskn ealaeslkrq kleleameai nkikdlesar vhevklreka eealratvqe
      361 reklikekee ameelqrttr nvtllngcvq eanckhdeva gklkliqasi mtlreekqri
      421 rrqkleavrw lerwrsrgqa gattcngfig ivedlpelae fsladvqtat cnfsesfkig
      481 kgghgcvykg emlgrtvaik klyphnmqgq sefqqeaqvl sklqhphlvt llgvcpeaws
      541 lvyeyvpngs lqdrlfrkts vspltwkira rivaeissal cflhsakpek ivhgdlkpen
      601 illdselsck icdfgisrlv tednlycpsf hcstepkgaf pysdpefqri gvptpksdiy
      661 afgliilqvl trrppvglag evrkaissgk lalildksag ewpmfvarrl vdlglqcces
      721 ygrdrpdlkp slvrelgqlh vteerpvpsf flcpilqeim hdpqvaadgf tyegealrgw
      781 lengretspm tnlklshlhl tpnhairqai qnwlcka
//
LOCUS       XP_016732901             804 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 33 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016732901
VERSION     XP_016732901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877412.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..804
                     /product="U-box domain-containing protein 33 isoform X3"
                     /calculated_mol_wt=90000
     Region          46..196
                     /region_name="USP_STK_Ubox_N"
                     /note="N-terminal USP domain of serine threonine kinases
                     (STK) and U-box domain proteins; cd01989"
                     /db_xref="CDD:467493"
     Region          <275..>416
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          466..726
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(466..469,472,474,485,487,516,530..533,582,586..587,
                     589,599..600)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Region          735..790
                     /region_name="RING-Ubox_WDSUB1-like"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; cd16655"
                     /db_xref="CDD:438317"
     CDS             1..804
                     /gene="LOC107943636"
                     /coded_by="XM_016877412.2:251..2665"
                     /db_xref="GeneID:107943636"
ORIGIN      
        1 melhnpahrd sipgprfrpr vdrpantqfp esaeetggfn agekdkvfia vgksveravn
       61 llqwtlkrfg gkhicllhvh qpspliptll gklpasqans rvlsayrkde keqlkkllen
      121 ysnfprkfkv hisivtiean qvhkgivqlv krhgirnlvm gaipencmsm kkssskssya
      181 akyvpcfcdi wfvdkgklvw treaseepcl stpasqaavt akssstqlte sivaqtdvsl
      241 sprlssfsnl ssprftngsk cassemrlsl dsyskdeden lyrqlgeasm eakaskneal
      301 aeslkrqkle leameainki kdlesarvhe vklrekaeea lratvqerek likekeeame
      361 elqrttrnvt llngcvqean ckhdevagkl kliqasimtl reekqrirrq kleavrwler
      421 wrsrgqagat tcngfigive dlpelaefsl advqtatcnf sesfkigkgg hgcvykgeml
      481 grtvaikkly phnmqgqsef qqeaqvlskl qhphlvtllg vcpeawslvy eyvpngslqd
      541 rlfrktsvsp ltwkirariv aeissalcfl hsakpekivh gdlkpenill dselsckicd
      601 fgisrlvted nlycpsfhcs tepkgafpys dpefqrigvp tpksdiyafg liilqvltrr
      661 ppvglagevr kaissgklal ildksagewp mfvarrlvdl glqccesygr drpdlkpslv
      721 relgqlhvte erpvpsfflc pilqeimhdp qvaadgftye gealrgwlen gretspmtnl
      781 klshlhltpn hairqaiqnw lcka
//
LOCUS       XP_016732897             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_016732897
VERSION     XP_016732897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877408.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41535
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107943635"
                     /coded_by="XM_016877408.2:156..1289"
                     /db_xref="GeneID:107943635"
ORIGIN      
        1 madgediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpvlltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssiek
      241 syelpdgqvi tigserfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_040941884             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_040941884
VERSION     XP_040941884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085950.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41535
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107943635"
                     /coded_by="XM_041085950.1:133..1266"
                     /db_xref="GeneID:107943635"
ORIGIN      
        1 madgediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpvlltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssiek
      241 syelpdgqvi tigserfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_016732898             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_016732898
VERSION     XP_016732898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877409.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41535
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107943635"
                     /coded_by="XM_016877409.2:156..1289"
                     /db_xref="GeneID:107943635"
ORIGIN      
        1 madgediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpvlltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssiek
      241 syelpdgqvi tigserfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_040941885             166 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 7 [Gossypium hirsutum].
ACCESSION   XP_040941885
VERSION     XP_040941885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085951.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..166
                     /product="ubiquitin-conjugating enzyme E2 7"
                     /calculated_mol_wt=18536
     Region          18..158
                     /region_name="UBCc_UBE2G1"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 G1 and related
                     proteins; cd23795"
                     /db_xref="CDD:467415"
     CDS             1..166
                     /gene="LOC107943633"
                     /coded_by="XM_041085951.1:138..638"
                     /db_xref="GeneID:107943633"
ORIGIN      
        1 masqaslllq kqlkdlcknp vdgfsaglvd ennifewsvt iigppdtlye ggffnaimsf
       61 ppnypnsppa vkftsevwhp nvyadgrvci silhppgddp ngyelaserw mpvhtvesiv
      121 lsiismlssp ndespanvea akewrerrde fkrkvsrcvr rsqeml
//
LOCUS       XP_016720273             103 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H4 [Gossypium hirsutum].
ACCESSION   XP_016720273
VERSION     XP_016720273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864784.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..103
                     /product="histone H4"
                     /calculated_mol_wt=11278
     Region          1..103
                     /region_name="PLN00035"
                     /note="histone H4; Provisional"
                     /db_xref="CDD:177669"
     CDS             1..103
                     /gene="LOC107932686"
                     /coded_by="XM_016864784.2:146..457"
                     /db_xref="GeneID:107932686"
ORIGIN      
        1 msgrgkggkg lgkggakrhr kvlrdniqgi tkpairrlar rggvkrisgl iyeetrgvlk
       61 iflenvirda vtyteharrk tvtamdvvya lkrqgrtlyg fgg
//
LOCUS       XP_016720173             423 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR9 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016720173
VERSION     XP_016720173.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864684.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720173.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..423
                     /product="ACT domain-containing protein ACR9 isoform X1"
                     /calculated_mol_wt=47542
     Region          22..89
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          113..188
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          254..328
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          346..423
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..423
                     /gene="LOC107932600"
                     /coded_by="XM_016864684.2:218..1489"
                     /db_xref="GeneID:107932600"
ORIGIN      
        1 mgvptddavv iqkgkengdp hvitvncpdk hglgcdicri ildfglyitk gdvstdgiwc
       61 ymvfwvvphs sspfvrwpsl knrlqslcps csvtfhfegq asnssapaas pvyllkffcl
      121 drkgllhdvt qvlselelti qkvkvtttpd grvldlffit dnmellhtke rqddtykqln
      181 avlgescisc elklvgpeye rhhgisslsp aiaeelfrfe lsdketrsqa lspdmaklkk
      241 asvvvdnsls pvhtllqivc vdhkglfydv lrtlkdcnik iaygrfslns kgyrdldlfi
      301 qqndgkkivd pdkqdglcsr lrmemlhplr viisnrgpdt ellvanpvel sgkgrprvfy
      361 dvtqalkslg icifsaeigr hssserewev yrfllddnck fkfssiggrn qivdrvrrll
      421 mgw
//
LOCUS       XP_040941886             411 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR9 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941886
VERSION     XP_040941886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085952.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..411
                     /product="ACT domain-containing protein ACR9 isoform X2"
                     /calculated_mol_wt=45809
     Region          22..89
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          113..188
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          254..328
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          346..>375
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..411
                     /gene="LOC107932600"
                     /coded_by="XM_041085952.1:243..1478"
                     /db_xref="GeneID:107932600"
ORIGIN      
        1 mgvptddavv iqkgkengdp hvitvncpdk hglgcdicri ildfglyitk gdvstdgiwc
       61 ymvfwvvphs sspfvrwpsl knrlqslcps csvtfhfegq asnssapaas pvyllkffcl
      121 drkgllhdvt qvlselelti qkvkvtttpd grvldlffit dnmellhtke rqddtykqln
      181 avlgescisc elklvgpeye rhhgisslsp aiaeelfrfe lsdketrsqa lspdmaklkk
      241 asvvvdnsls pvhtllqivc vdhkglfydv lrtlkdcnik iaygrfslns kgyrdldlfi
      301 qqndgkkivd pdkqdglcsr lrmemlhplr viisnrgpdt ellvanpvel sgkgrprvfy
      361 dvtqalkslg icifsksedi qvrngngkct gsfwmitans nsqvleveir l
//
LOCUS       XP_016719952             238 aa            linear   PLN 06-AUG-2024
DEFINITION  THO complex subunit 4A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719952
VERSION     XP_016719952.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864463.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719952.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..238
                     /product="THO complex subunit 4A isoform X1"
                     /calculated_mol_wt=25189
     Region          86..160
                     /region_name="RRM_THOC4"
                     /note="RNA recognition motif (RRM) found in THO complex
                     subunit 4 (THOC4) and similar proteins; cd12680"
                     /db_xref="CDD:410081"
     Site            order(104..105,108..109,141..142,144..147,149..153,156)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410081"
     CDS             1..238
                     /gene="LOC107932446"
                     /coded_by="XM_016864463.2:264..980"
                     /db_xref="GeneID:107932446"
ORIGIN      
        1 mssalemsld dlikrnrkpr sgksrgrgrg sgpgparrfp nrganrsapy apakvlettr
       61 qqdmfsdkga alqglagrns gietgtklyi snldygvsnd dikelfsevg dlkrfsvhyd
      121 rsgrskgtad ivftrradal aavkrynnve ldgkpmkiei vgtniatppa plgangafrs
      181 sngamkggqg kgggfgrqrg ggaagrgrgr gkgrgekvsa edldadleky hsesmqtn
//
LOCUS       XP_016720071             189 aa            linear   PLN 06-AUG-2024
DEFINITION  THO complex subunit 4A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016720071
VERSION     XP_016720071.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864582.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720071.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..189
                     /product="THO complex subunit 4A isoform X2"
                     /calculated_mol_wt=20219
     Region          86..160
                     /region_name="RRM_THOC4"
                     /note="RNA recognition motif (RRM) found in THO complex
                     subunit 4 (THOC4) and similar proteins; cd12680"
                     /db_xref="CDD:410081"
     Site            order(104..105,108..109,141..142,144..147,149..153,156)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410081"
     CDS             1..189
                     /gene="LOC107932446"
                     /coded_by="XM_016864582.2:117..686"
                     /db_xref="GeneID:107932446"
ORIGIN      
        1 mssalemsld dlikrnrkpr sgksrgrgrg sgpgparrfp nrganrsapy apakvlettr
       61 qqdmfsdkga alqglagrns gietgtklyi snldygvsnd dikelfsevg dlkrfsvhyd
      121 rsgrskgtad ivftrradal aavkrynnve ldgkpmkiei vgtniatppa plgangafrs
      181 sngamkgvf
//
LOCUS       XP_040941887             139 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-depolymerizing factor 2 [Gossypium hirsutum].
ACCESSION   XP_040941887
VERSION     XP_040941887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085953.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="actin-depolymerizing factor 2"
                     /calculated_mol_wt=15862
     Region          4..138
                     /region_name="ADF_gelsolin"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; cl15697"
                     /db_xref="CDD:472830"
     Site            6..7
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(82,84,98,125,128)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..139
                     /gene="LOC121212688"
                     /coded_by="XM_041085953.1:344..763"
                     /db_xref="GeneID:121212688"
ORIGIN      
        1 manaasgmav hddcklkfle lkakrtyrfi vfkieekqkq vvveklgeps qsyddftasl
       61 padecryavy dfdfvtaenc qksriffiaw spdtsrvrsk miyasskdrf kreldgiqve
      121 lqatdptemg ldvirsran
//
LOCUS       XP_016719587             130 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S15a-1 [Gossypium hirsutum].
ACCESSION   XP_016719587
VERSION     XP_016719587.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864098.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719587.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..130
                     /product="40S ribosomal protein S15a-1"
                     /calculated_mol_wt=14659
     Region          1..130
                     /region_name="PLN00146"
                     /note="40S ribosomal protein S15a; Provisional"
                     /db_xref="CDD:215075"
     CDS             1..130
                     /gene="LOC107932118"
                     /coded_by="XM_016864098.2:173..565"
                     /db_xref="GeneID:107932118"
ORIGIN      
        1 mvrvsvlnda lksmynaekr gkrqvmirps skviikfllv mqkhgyigef eyvddhrsgk
       61 ivvelngrln kcgvisprfd vgvkeiegwt arllpsrqfg yivlttsagi mdheearrkn
      121 vggkvlgffy
//
LOCUS       XP_040941888             130 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S15a-1 [Gossypium hirsutum].
ACCESSION   XP_040941888
VERSION     XP_040941888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085954.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..130
                     /product="40S ribosomal protein S15a-1"
                     /calculated_mol_wt=14659
     Region          1..130
                     /region_name="PLN00146"
                     /note="40S ribosomal protein S15a; Provisional"
                     /db_xref="CDD:215075"
     CDS             1..130
                     /gene="LOC107932118"
                     /coded_by="XM_041085954.1:132..524"
                     /db_xref="GeneID:107932118"
ORIGIN      
        1 mvrvsvlnda lksmynaekr gkrqvmirps skviikfllv mqkhgyigef eyvddhrsgk
       61 ivvelngrln kcgvisprfd vgvkeiegwt arllpsrqfg yivlttsagi mdheearrkn
      121 vggkvlgffy
//
LOCUS       XP_040941889             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABE1c [Gossypium hirsutum].
ACCESSION   XP_040941889
VERSION     XP_040941889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085955.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ras-related protein RABE1c"
                     /calculated_mol_wt=23511
     Region          13..180
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            13..17
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            22..29
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(24..30,40..43,46..47,73,128..129,131..132,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(30..42,44..46)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(40,45..53)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(43,45,49..56,63,65)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(48,50..52,67,69,76..77,80,84,86..89,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(48..49,51,69..70,77,79,81..83)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            48..52
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(73,75..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            76..81
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            84..88
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            116..125
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            175..180
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..215
                     /gene="LOC121212690"
                     /coded_by="XM_041085955.1:224..871"
                     /db_xref="GeneID:121212690"
ORIGIN      
        1 maapparara dydyliklll igdsgvgksc lllrfsdgsf ttsfittigi dfkirtield
       61 gkriklqiwd tagqerfrti ttayyrgamg illvydvtde ssfnnirnwi rnieqhasdn
      121 vnkilvgnka dmdeskravp tskgqalade ygikffetsa ktnlnveevf fsiakdikqr
      181 ladsdtkaep stikinqpda aggagqaaqk lgccg
//
LOCUS       XP_016719406             169 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein ZAT12 [Gossypium hirsutum].
ACCESSION   XP_016719406
VERSION     XP_016719406.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016863917.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719406.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..169
                     /product="zinc finger protein ZAT12"
                     /calculated_mol_wt=18555
     Region          41..67
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          44..64
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          84..107
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          86..106
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..169
                     /gene="LOC107931921"
                     /coded_by="XM_016863917.2:93..602"
                     /db_xref="GeneID:107931921"
ORIGIN      
        1 mkrdredrei eamamvnclm llskvgqidp pkhntihqrg vfacktcdkr fssfqalggh
       61 rashkkprft dvdlpvspkk pkthecsicg lefpigqalg ghmrkhrvvs negmvvtrpv
      121 teklngddad ndgglcldlk lapcgidldl klekaaappr mppvvhlfi
//
LOCUS       XP_040941890             250 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB59 [Gossypium hirsutum].
ACCESSION   XP_040941890
VERSION     XP_040941890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085956.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..250
                     /product="transcription factor MYB59"
                     /calculated_mol_wt=28899
     Region          10..>116
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..250
                     /gene="LOC121212691"
                     /coded_by="XM_041085956.1:335..1087"
                     /db_xref="GeneID:121212691"
ORIGIN      
        1 memvkdescr kgpwtekedm vlvnfvhlfg drrwdfiakv sglnrtgksc rlrwvnylhp
       61 glkrgkmtpq eeklvlelha kwgnrwsria rrlpgrtdne iknywrthmr kmalekkrst
      121 spsssssstv trvdslpssg tgkvsfydtg gpkmavfddv kgysmdeiwk didmsegntt
      181 klpssenyse qgccnhfscp smassppwdf swdyslwkmd dddeeeeeee rkvfiattnn
      241 qlfnlfvhkp
//
LOCUS       XP_040941892             252 aa            linear   PLN 06-AUG-2024
DEFINITION  probable aquaporin TIP1-2 [Gossypium hirsutum].
ACCESSION   XP_040941892
VERSION     XP_040941892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085958.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..252
                     /product="probable aquaporin TIP1-2"
                     /calculated_mol_wt=25688
     Region          1..252
                     /region_name="PLN00027"
                     /note="aquaporin TIP; Provisional"
                     /db_xref="CDD:177664"
     Site            order(65,83..85,195..196,199,202)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(85..87,199..201)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..252
                     /gene="LOC121212692"
                     /coded_by="XM_041085958.1:187..945"
                     /db_xref="GeneID:121212692"
ORIGIN      
        1 mpisriavgs paeagqadal kaalaefisv lifvfagegs gmafnkltdd gsstpaglva
       61 aalahalalf vavsiganis gghvnpavtf gafvgghitl vrsilywiaq llgsvvacfl
      121 lkfstggmtt safslssgvg awnavvfeiv mtfglvytvy atavdpkkgn igiiapiaig
      181 fivganilag gafdgasmnp avsfgpavvs wtwdnhwvyw lgpfigsaia aivyevffia
      241 pstyeevpsa df
//
LOCUS       XP_016719152             256 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719152
VERSION     XP_016719152.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016863663.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719152.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..256
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28593
     Region          12..252
                     /region_name="DUF1635"
                     /note="Protein of unknown function (DUF1635); pfam07795"
                     /db_xref="CDD:400238"
     CDS             1..256
                     /gene="LOC107931698"
                     /coded_by="XM_016863663.2:157..927"
                     /db_xref="GeneID:107931698"
ORIGIN      
        1 meelssswny qedfdelnlk lqytimelet vkmdaieqtr khneetkhll nllelayker
       61 deaknqlqnl inklipssqf enpifltpkp nstsitesns lsdpyhhhnn hnhgdsfidt
      121 vtspdfstik mgflnqtnvp sittvdgltk gkilpqkgkl lqavmeagpl letllvagsl
      181 pnwrnppplq alkfptvsin gctklasrdy pnradmvqkr fnhsspsvln fvssgfsgsq
      241 vlntsgavkr qkvtmt
//
LOCUS       XP_016719066             465 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g07740,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016719066
VERSION     XP_016719066.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016863577.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719066.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..465
                     /product="pentatricopeptide repeat-containing protein
                     At1g07740, mitochondrial"
                     /calculated_mol_wt=52974
     Region          125..151
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          159..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <178..>428
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          194..221
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          227..256
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          262..291
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          297..326
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          332..361
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          367..396
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          402..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..465
                     /gene="LOC107931607"
                     /coded_by="XM_016863577.2:137..1534"
                     /db_xref="GeneID:107931607"
ORIGIN      
        1 mihsiskpin qiqrnlinhf vkihehskdy hsfgakrpkt qtnhenpqkr rpkrsppfva
       61 amrgihdpde alslfheyyq mgykhdypsf ssliyklaks rnfeavetll gvlqnlnipc
      121 ketlfcalfq hygkahlsgk avelfrkmpc fncvctvqsl nsvlnvlvdn drfgdakeif
      181 dkskemgfrp ntvtfnvmik gllngaefde acnmfdemle rnvepsvvty nsfisflckk
      241 gevekakklf edmvkkgkyp navtyallme glcslgeyke akklmfdmey kgcktkvinf
      301 gvlmsylgkk geieeaksll semkkrrfka dvviynilvn ylckeskvqe aykvlidmqv
      361 kgcepnaaty rmmvdgfcnv gdfegalkvl nvmlksrhcp rsetfcrlaa gllqcgkvdd
      421 acfvleemek rkisldlevw gdlirdaysg vgdtnehltq iilgn
//
LOCUS       XP_040941893             664 aa            linear   PLN 06-AUG-2024
DEFINITION  probable NOT transcription complex subunit VIP2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040941893
VERSION     XP_040941893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085959.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..664
                     /product="probable NOT transcription complex subunit VIP2
                     isoform X1"
                     /calculated_mol_wt=70561
     Region          78..>388
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          532..653
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..664
                     /gene="LOC121212693"
                     /coded_by="XM_041085959.1:350..2344"
                     /db_xref="GeneID:121212693"
ORIGIN      
        1 msgllnssvn gsasnipdss grsfatsfsg qsgaaspgfh htgtiqglhg ihgsfnvpnm
       61 pgtltsrnst lsnvptggvq qptgnlsggr fasnnlpval sqlshgsshg hsgvtnrggi
      121 svvgnpgfss ntngvggsip gilptsaaig nrnavpglgv spilgnsgpr itssmgnmvg
      181 ggnigrsiss ggglsvpgla srlnlsansg sgslsmqgqn rlmsgvlpqg spqvismlgn
      241 sypsaggpls qshvqavnnl ssmgmlndvn stdnspfdin ndfpqltsrp ssaggpqgql
      301 gslrkqgpsp ivqqnqefsi qnedfpalpg frggnadygm dlhqkdqlhd ntmlmmqsqh
      361 fsmgrpagfn lggsysshrp qqqqqhvpsa sssgvsfspv nnqdllhlhg sdifpsshss
      421 yhsqtsgppg iglrplnssn svsgmgydql iqqyqqhqnq sqlrlqqmsa vnqsfsepgm
      481 kpmqaaqsnh dpygllglqs vlrmndldlt slalgidltt lglnlnssen lyktfgspws
      541 depakgdpef tvpqcyyakq ppplhqgyfs kftvdtlfyi fysmpkdeaq lyaanelynr
      601 gwfyhkehwc wfirvpnvep lvktntyerg syhcfdpisf etvrkdnfvv hyemlekrpa
      661 lpqh
//
LOCUS       XP_040941894             639 aa            linear   PLN 06-AUG-2024
DEFINITION  probable NOT transcription complex subunit VIP2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040941894
VERSION     XP_040941894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085960.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..639
                     /product="probable NOT transcription complex subunit VIP2
                     isoform X2"
                     /calculated_mol_wt=67759
     Region          78..>405
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          507..628
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..639
                     /gene="LOC121212693"
                     /coded_by="XM_041085960.1:347..2266"
                     /db_xref="GeneID:121212693"
ORIGIN      
        1 msgllnssvn gsasnipdss grsfatsfsg qsgaaspgfh htgtiqglhg ihgsfnvpnm
       61 pgtltsrnst lsnvptggvq qptgnlsggr fasnnlpval sqlshgsshg hsgvtnrggi
      121 svvgnpgfss ntngvggsip gilptsaaig nrnavpglgv spilgnsgpr itssmgnmvg
      181 ggnigrsiss ggglsvpgla srlnlsansg sgslsmqgqn rlmsgvlpqg spqvismlgn
      241 sypsaggpls qshvqavnnl ssmgmlndvn stdnspfdin ndfpqltsrp ssaggpqgql
      301 gslrkqgpsp ivqqnqefsi qnedfpalpg frggnadygm dlhqkdqlhd ntmlmmqsqh
      361 fsmgrpagfn lggsysshrp qqqqqhvpsa sssgvsfspt sgppgiglrp lnssnsvsgm
      421 gydqliqqyq qhqnqsqlrl qqmsavnqsf sepgmkpmqa aqsnhdpygl lglqsvlrmn
      481 dldltslalg idlttlglnl nssenlyktf gspwsdepak gdpeftvpqc yyakqppplh
      541 qgyfskftvd tlfyifysmp kdeaqlyaan elynrgwfyh kehwcwfirv pnveplvktn
      601 tyergsyhcf dpisfetvrk dnfvvhyeml ekrpalpqh
//
LOCUS       XP_040941895             612 aa            linear   PLN 06-AUG-2024
DEFINITION  probable NOT transcription complex subunit VIP2 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941895
VERSION     XP_040941895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085961.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..612
                     /product="probable NOT transcription complex subunit VIP2
                     isoform X3"
                     /calculated_mol_wt=65096
     Region          480..601
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..612
                     /gene="LOC121212693"
                     /coded_by="XM_041085961.1:348..2186"
                     /db_xref="GeneID:121212693"
ORIGIN      
        1 msgllnssvn gsasnipdss grsfatsfsg qsgaaspgfh htgtiqglhg ihgsfnvpnm
       61 pgtltsrnst lsnvptggvq qptgnlsggr fasnnlpval sqlshgsshg hsgvtnrggi
      121 svvgnpgfss ntngvggsip gilptsaaig nrnavpglgv spilgnsgpr itssmgnmvg
      181 ggnigrsiss ggglsvpgla srlnlsansg sgslsmqgqn rlmsgvlpqg spqltsrpss
      241 aggpqgqlgs lrkqgpspiv qqnqefsiqn edfpalpgfr ggnadygmdl hqkdqlhdnt
      301 mlmmqsqhfs mgrpagfnlg gsysshrpqq qqqhvpsass sgvsfspvnn qdllhlhgsd
      361 ifpsshssyh sqtsgppgig lrplnssnsv sgmgydqliq qyqqhqnqsq lrlqqmsavn
      421 qsfsepgmkp mqaaqsnhdp ygllglqsvl rmndldltsl algidlttlg lnlnssenly
      481 ktfgspwsde pakgdpeftv pqcyyakqpp plhqgyfskf tvdtlfyify smpkdeaqly
      541 aanelynrgw fyhkehwcwf irvpnveplv ktntyergsy hcfdpisfet vrkdnfvvhy
      601 emlekrpalp qh
//
LOCUS       XP_040941897             419 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL5 [Gossypium hirsutum].
ACCESSION   XP_040941897
VERSION     XP_040941897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085963.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="probable serine/threonine-protein kinase PBL5"
                     /calculated_mol_wt=46263
     Region          108..373
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(108..112,116,129,131,160,176..179,183,185,229,231,
                     233..234,236,247,250,268..271)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(108..112,116,129,131,160,176..179,183,229,231,
                     233..234,236,247)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(112,183,185,229,231,233,250,268..271)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(246..253,264..271)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..419
                     /gene="LOC121212694"
                     /coded_by="XM_041085963.1:192..1451"
                     /db_xref="GeneID:121212694"
ORIGIN      
        1 mgcfcfsgns skgsekptkk iiinnkndss snkskphaqt qtgsdelkvt vtneevvakk
       61 gdqlsidvkn fnlndeiskd gkannlaqsf tfeelatatg nfrsdcflge ggfgkvykgf
      121 ldktsqvvai kqldrngaqg irefvvevlt lsmaehpnlv kligfcaegd qrllvyeymp
      181 lgslenhlye lpasrkpldw ntrmkiaaga argleylhek mkppviyrdl kcsnillgeg
      241 yhpklsdfgl akvgpigdkt hvstrvmgty gycapdyamt gqltfksdiy sfgvvlleli
      301 tgrkaidetr drseqnlvaw arpmfkdrrn fsrmvdpllq gqypvrglyq alaiaamcvq
      361 eqpnmrpait dvvmalnyla sqkydpdnpv qssrkskssa atngdddkkp vaehelnsd
//
LOCUS       XP_016718727             103 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H4 [Gossypium hirsutum].
ACCESSION   XP_016718727
VERSION     XP_016718727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016863238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..103
                     /product="histone H4"
                     /calculated_mol_wt=11278
     Region          1..103
                     /region_name="PLN00035"
                     /note="histone H4; Provisional"
                     /db_xref="CDD:177669"
     CDS             1..103
                     /gene="LOC107931332"
                     /coded_by="XM_016863238.2:309..620"
                     /db_xref="GeneID:107931332"
ORIGIN      
        1 msgrgkggkg lgkggakrhr kvlrdniqgi tkpairrlar rggvkrisgl iyeetrgvlk
       61 iflenvirda vtyteharrk tvtamdvvya lkrqgrtlyg fgg
//
LOCUS       XP_040941898            1039 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941898
VERSION     XP_040941898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085964.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1039
                     /product="uncharacterized protein"
                     /calculated_mol_wt=112906
     Region          2..383
                     /region_name="MOT2"
                     /note="Transcriptional repressor [Transcription]; COG5175"
                     /db_xref="CDD:227502"
     CDS             1..1039
                     /gene="LOC121212695"
                     /coded_by="XM_041085964.1:162..3281"
                     /db_xref="GeneID:121212695"
ORIGIN      
        1 msdagertcp lcaeemdltd qqlkpckcgy eicvwcwhhi mdmaekdkte grcpacrsay
       61 dkekivgmaa ncerlvaein sgrktksqka ktkssegrkq lsnvrviqrn lvyivglpln
      121 ladedllqrr eyfgqygkvl kvsmsrtaag tiqqfpnntc svyityskee eavrciqsvh
      181 vfvldgkplk acfgttkych awlrnmpcsn pdclylheig sqedsftkde iisaytrvqq
      241 itgptnnmqr ragtmlpppv ddycpnssas takpisknap nnmvlssqkd stsngstgrs
      301 vglpagaswg mralnqpqsa sltcsngpsk qksdtvsstl pflsavmstn rpfalhddak
      361 knpseeidvm ylkgkpdsle qntvsdsrtt apeepsspdg vptskalssq iscppassyn
      421 dpstytlstv tssifdhggk sftsssekgr smsstdgeiq slcsdvaslt sdrnvanghl
      481 nvvrpsssas dhgsnsssss qglqqccteh yreplsstsp grsatspdrv svskeqsdwr
      541 ivtqtqavas ssseieedil sfdnqrlkdp evisrsnymp nspislhlsn lsrshsfqng
      601 dacgavssna daffvdnqvs aslhlhgssv sslsngypqk yisssigsgi ttegnllvsn
      661 qekgkqmgrf lgnaesntsk dtgensiisn ilsldfdtwd eslpspqnla kllgdtdqqq
      721 pnslklsssg kalnssqsrf lfarqedssy hpfgvessfs vfrqmpqnhi ssqdfaesrd
      781 ldlnafgisn gfspssfdey ekftgspslf ssnklsvsra qvsappgfsv psrapppgfs
      841 shervdhsfd tpgnhltdss sllrnsylap vsggfggaed vefmdpaila vgkgrhqggl
      901 nnsgldirsn fppqlspyen earvqllmqr slsphqnlrh dvgdsfssln dsyglssrlm
      961 aqsqvnnisp yaqlplqqsr nshmsnglhw dgwnevqggn saaiaellrn erlgfnkfys
     1021 gyedskyrmg dlynrtfgi
//
LOCUS       XP_040941899            1039 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941899
VERSION     XP_040941899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085965.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1039
                     /product="uncharacterized protein"
                     /calculated_mol_wt=112906
     Region          2..383
                     /region_name="MOT2"
                     /note="Transcriptional repressor [Transcription]; COG5175"
                     /db_xref="CDD:227502"
     CDS             1..1039
                     /gene="LOC121212695"
                     /coded_by="XM_041085965.1:162..3281"
                     /db_xref="GeneID:121212695"
ORIGIN      
        1 msdagertcp lcaeemdltd qqlkpckcgy eicvwcwhhi mdmaekdkte grcpacrsay
       61 dkekivgmaa ncerlvaein sgrktksqka ktkssegrkq lsnvrviqrn lvyivglpln
      121 ladedllqrr eyfgqygkvl kvsmsrtaag tiqqfpnntc svyityskee eavrciqsvh
      181 vfvldgkplk acfgttkych awlrnmpcsn pdclylheig sqedsftkde iisaytrvqq
      241 itgptnnmqr ragtmlpppv ddycpnssas takpisknap nnmvlssqkd stsngstgrs
      301 vglpagaswg mralnqpqsa sltcsngpsk qksdtvsstl pflsavmstn rpfalhddak
      361 knpseeidvm ylkgkpdsle qntvsdsrtt apeepsspdg vptskalssq iscppassyn
      421 dpstytlstv tssifdhggk sftsssekgr smsstdgeiq slcsdvaslt sdrnvanghl
      481 nvvrpsssas dhgsnsssss qglqqccteh yreplsstsp grsatspdrv svskeqsdwr
      541 ivtqtqavas ssseieedil sfdnqrlkdp evisrsnymp nspislhlsn lsrshsfqng
      601 dacgavssna daffvdnqvs aslhlhgssv sslsngypqk yisssigsgi ttegnllvsn
      661 qekgkqmgrf lgnaesntsk dtgensiisn ilsldfdtwd eslpspqnla kllgdtdqqq
      721 pnslklsssg kalnssqsrf lfarqedssy hpfgvessfs vfrqmpqnhi ssqdfaesrd
      781 ldlnafgisn gfspssfdey ekftgspslf ssnklsvsra qvsappgfsv psrapppgfs
      841 shervdhsfd tpgnhltdss sllrnsylap vsggfggaed vefmdpaila vgkgrhqggl
      901 nnsgldirsn fppqlspyen earvqllmqr slsphqnlrh dvgdsfssln dsyglssrlm
      961 aqsqvnnisp yaqlplqqsr nshmsnglhw dgwnevqggn saaiaellrn erlgfnkfys
     1021 gyedskyrmg dlynrtfgi
//
LOCUS       XP_040941900             253 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate peroxidase 2, cytosolic [Gossypium hirsutum].
ACCESSION   XP_040941900
VERSION     XP_040941900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085966.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..253
                     /product="L-ascorbate peroxidase 2, cytosolic"
                     /calculated_mol_wt=27871
     Region          8..253
                     /region_name="ascorbate_peroxidase"
                     /note="Ascorbate peroxidases and cytochrome C peroxidases;
                     cd00691"
                     /db_xref="CDD:173825"
     Site            order(37..38,41,44,135..137,148,162..163,165..166,
                     168..172,175..176,182,208,210,238,242)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173825"
     Site            order(114,166,168..169,171,196,205..206)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173825"
     Site            order(167,183,185,188,190,192)
                     /site_type="other"
                     /note="K+ binding site [ion binding]"
                     /db_xref="CDD:173825"
     CDS             1..253
                     /gene="LOC121212696"
                     /coded_by="XM_041085966.1:156..917"
                     /db_xref="GeneID:121212696"
ORIGIN      
        1 mevmpksypv vsedykkaie karrklrgli aekncapiml rlawhsagtf dwktntggpf
       61 gtvkhpaela hkantgldia inllepikeq lpiisyadfy qlagvvavev tggpeipfhp
      121 grpdkeevpp egrlpstdkg adhlrevfin qmgftdkdiv alsgahtlgr chkdrsgfeg
      181 awttnplifd nsyfkellsg tgadimqlps dkvlvsdpvf rpfvekyaad edeffadyan
      241 ahlrlselgf add
//
LOCUS       XP_040941901             738 aa            linear   PLN 06-AUG-2024
DEFINITION  serrate RNA effector molecule [Gossypium hirsutum].
ACCESSION   XP_040941901
VERSION     XP_040941901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085967.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..738
                     /product="serrate RNA effector molecule"
                     /calculated_mol_wt=83150
     Region          202..>283
                     /region_name="SERRATE_Ars2_N"
                     /note="SERRATE/Ars2, N-terminal domain; pfam12066"
                     /db_xref="CDD:463453"
     Region          437..645
                     /region_name="ARS2"
                     /note="Arsenite-resistance protein 2; pfam04959"
                     /db_xref="CDD:461498"
     CDS             1..738
                     /gene="LOC107936065"
                     /coded_by="XM_041085967.1:157..2373"
                     /db_xref="GeneID:107936065"
ORIGIN      
        1 madvinmpad slddrrgggd rkdndnnnnn nrqpplsddp nssppspppp rrrerdsrer
       61 rdrdfydrnr sppppltrer dykrrnsisp ppppfyrdrr hsppprrspp ykrsrredgg
      121 yrgrrgsprg gfgpggrrfg ydygggydre mmgrtghpee rppgryfgrs tggyqdwdsg
      181 rgcyidasss gstqreglms ykqfiqeled divpaeaerr yqeykseyis tqkraffdah
      241 knedwlkdky hptnlvtvie rrnefarkva kdflldlqsg tldlspavns lsskkseqts
      301 dpnsedeadi ggkrkrnare paketdlsaa pkahptssdp rrisidieqa qslmrkldse
      361 kgisenilsg pdnqitrdks hgsstgpvii vrgltsvkgl egvelldtli tylwrvhgld
      421 yyglietsea kglrhvreeg kgsdvtings eweknldtrw qerlkgqdpl elmtakekld
      481 aaavealdpf vrkirdekyg wkygcgakgc tklfhaaefv hkhlklkhpe lvmeltskmr
      541 eelyfqnymn dpgapggtpv mqqsvpkdkp lrrkmlencl kdergsrrer dnrangsdry
      601 drsenpqssd lpsnnegpeg gnrddlmfes fggqgmhvat pfssdmappp vlmpvpgagp
      661 lgpfvpappe lamqvfreqg gplpfegnsr sgrpgpnlsg papfllppgf rqdprrlrsy
      721 qdldapedev tvidyrsl
//
LOCUS       XP_016718322             596 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ETHYLENE INSENSITIVE 3 [Gossypium hirsutum].
ACCESSION   XP_016718322
VERSION     XP_016718322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..596
                     /product="protein ETHYLENE INSENSITIVE 3"
                     /calculated_mol_wt=66963
     Region          49..296
                     /region_name="EIN3"
                     /note="Ethylene insensitive 3; pfam04873"
                     /db_xref="CDD:398508"
     CDS             1..596
                     /gene="LOC107931022"
                     /coded_by="XM_016862833.2:398..2188"
                     /db_xref="GeneID:107931022"
ORIGIN      
        1 mmmfeemgic gdmdffgasf gekdvtaasq vemdalvddd ysdeevdvde lerrvwrdkm
       61 rlkrlkdqsk gkdgvdtakq rqsqeqarrk kmsraqdgil kymlkmmevc kaqgfvygii
      121 pekgkpvtga sdnlrewwkd kvrfdrngpa aiakyqadns ipgnndgcnl igptphtlqe
      181 lqdttlgsll salmqhcdpp qrrfplekgv pppwwptgte ewwpqlglpk dqgppsykkp
      241 hdlkkawkvg vltavikhis pdiakirklv rqskclqdkm takesatwla iinqeealar
      301 elypdscppl sssggsgslv indcneydie gvvdepifdv qeckpgnlnr viqqpsfpvn
      361 ldflqkrkps ddiniehkiy tceflqcpys elqlgfhdrt ardnhqltcp hrnssaqfgg
      421 snfnindvkp vifpppfaql kpaapsttsv stpfdlsglg fpedgqkmis nlmsiydnnv
      481 qanknaspik npvtegqnll qpktqqqqde ffrgqglsff nesnipannq ilpqgeaqfd
      541 rlktsnspfe ttynnnnngf klmfgspfdl ssfdynddlq adgmdampkq dvsiwf
//
LOCUS       XP_016718111             304 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016718111
VERSION     XP_016718111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862622.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 2"
                     /calculated_mol_wt=34061
     Region          235..289
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          236..287
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(239..240,242..244,246..251,253..255)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(254,257..258,261..262,264..265,268..269,271..272,
                     275..276,278..279,282..283,285..286)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..304
                     /gene="LOC107930733"
                     /coded_by="XM_016862622.2:275..1189"
                     /db_xref="GeneID:107930733"
ORIGIN      
        1 mgiqtmgsqs ngqqsllqps plvrqnswys ltlnevenql gnlgkplgsi nldelldnvw
       61 stelnpplgm nnsesissss sslhrqaslt laralsgktv dqvwseiqqg qkrrngegmk
      121 dqereaklge ttledflvqa glfvaetsld ptmefdntrq qslphqfrls ptpsigtlsd
      181 tpmtgqkrdv feksieslpq qfglsptpsi gtlsdtpmtg rkrdaqdafe ksierrlrrk
      241 iknresaars rarkqayhne lvnkvsrlee dnlklkreke fdtksqcets etryqlrrts
      301 sasf
//
LOCUS       XP_040941902             304 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040941902
VERSION     XP_040941902.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085968.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 2"
                     /calculated_mol_wt=34061
     Region          235..289
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          236..287
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(239..240,242..244,246..251,253..255)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(254,257..258,261..262,264..265,268..269,271..272,
                     275..276,278..279,282..283,285..286)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..304
                     /gene="LOC107930733"
                     /coded_by="XM_041085968.1:761..1675"
                     /db_xref="GeneID:107930733"
ORIGIN      
        1 mgiqtmgsqs ngqqsllqps plvrqnswys ltlnevenql gnlgkplgsi nldelldnvw
       61 stelnpplgm nnsesissss sslhrqaslt laralsgktv dqvwseiqqg qkrrngegmk
      121 dqereaklge ttledflvqa glfvaetsld ptmefdntrq qslphqfrls ptpsigtlsd
      181 tpmtgqkrdv feksieslpq qfglsptpsi gtlsdtpmtg rkrdaqdafe ksierrlrrk
      241 iknresaars rarkqayhne lvnkvsrlee dnlklkreke fdtksqcets etryqlrrts
      301 sasf
//
LOCUS       XP_016717971             304 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016717971
VERSION     XP_016717971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 2"
                     /calculated_mol_wt=34061
     Region          235..289
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          236..287
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(239..240,242..244,246..251,253..255)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(254,257..258,261..262,264..265,268..269,271..272,
                     275..276,278..279,282..283,285..286)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..304
                     /gene="LOC107930733"
                     /coded_by="XM_016862482.2:329..1243"
                     /db_xref="GeneID:107930733"
ORIGIN      
        1 mgiqtmgsqs ngqqsllqps plvrqnswys ltlnevenql gnlgkplgsi nldelldnvw
       61 stelnpplgm nnsesissss sslhrqaslt laralsgktv dqvwseiqqg qkrrngegmk
      121 dqereaklge ttledflvqa glfvaetsld ptmefdntrq qslphqfrls ptpsigtlsd
      181 tpmtgqkrdv feksieslpq qfglsptpsi gtlsdtpmtg rkrdaqdafe ksierrlrrk
      241 iknresaars rarkqayhne lvnkvsrlee dnlklkreke fdtksqcets etryqlrrts
      301 sasf
//
LOCUS       XP_016718043             304 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016718043
VERSION     XP_016718043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862554.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 2"
                     /calculated_mol_wt=34061
     Region          235..289
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          236..287
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(239..240,242..244,246..251,253..255)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(254,257..258,261..262,264..265,268..269,271..272,
                     275..276,278..279,282..283,285..286)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..304
                     /gene="LOC107930733"
                     /coded_by="XM_016862554.2:268..1182"
                     /db_xref="GeneID:107930733"
ORIGIN      
        1 mgiqtmgsqs ngqqsllqps plvrqnswys ltlnevenql gnlgkplgsi nldelldnvw
       61 stelnpplgm nnsesissss sslhrqaslt laralsgktv dqvwseiqqg qkrrngegmk
      121 dqereaklge ttledflvqa glfvaetsld ptmefdntrq qslphqfrls ptpsigtlsd
      181 tpmtgqkrdv feksieslpq qfglsptpsi gtlsdtpmtg rkrdaqdafe ksierrlrrk
      241 iknresaars rarkqayhne lvnkvsrlee dnlklkreke fdtksqcets etryqlrrts
      301 sasf
//
LOCUS       XP_040941903             249 aa            linear   PLN 06-AUG-2024
DEFINITION  oligoribonuclease [Gossypium hirsutum].
ACCESSION   XP_040941903
VERSION     XP_040941903.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085969.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..249
                     /product="oligoribonuclease"
                     /calculated_mol_wt=27958
     Region          70..242
                     /region_name="Orn"
                     /note="DEDDh 3'-5' exonuclease domain of oligoribonuclease
                     and similar proteins; cd06135"
                     /db_xref="CDD:99838"
     Site            order(74..77,79,169..170,172..174,221,226)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99838"
     Site            order(74..77,79,169..170,172..173,221,226)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99838"
     Site            order(74,76,174,221,226)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99838"
     Site            order(97,172..173,176,179,192..193,195,198,201,206..207,
                     239,241..242)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:99838"
     CDS             1..249
                     /gene="LOC107930928"
                     /coded_by="XM_041085969.1:138..887"
                     /db_xref="GeneID:107930928"
ORIGIN      
        1 mdglsnafsv leidvddhlp lstastisgs atllsfndpg ksksnekgsi edkqseadss
       61 llsenyklpl vwidmemtgl dievdrilei aciitdgklt ksvegpdlvi hqskecldrm
      121 gewcqnhhga sgltqkvles tvsereaekq viefvkrnvg tyrphiagns iymdflflkk
      181 ympdlaslfs hvvvdvssir alcmrwypkd qenaplkekk hramddikes ilelkyfket
      241 ifkakskkk
//
LOCUS       XP_016717689             274 aa            linear   PLN 06-AUG-2024
DEFINITION  yrdC domain-containing protein, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016717689
VERSION     XP_016717689.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..274
                     /product="yrdC domain-containing protein, mitochondrial"
                     /calculated_mol_wt=29279
     Region          73..255
                     /region_name="TsaC"
                     /note="tRNA A37 threonylcarbamoyladenosine synthetase
                     subunit TsaC/SUA5/YrdC [Translation, ribosomal structure
                     and biogenesis]; COG0009"
                     /db_xref="CDD:439780"
     CDS             1..274
                     /gene="LOC107930504"
                     /coded_by="XM_016862200.2:90..914"
                     /db_xref="GeneID:107930504"
ORIGIN      
        1 mnistrfgak lpllsnlvpi revpklgflp fshrkrgfrs gfskkmalnv ekfdvgvenq
       61 lglirsates nadeaiealk agkviavptd tlygfacdac sskavnriyh ikgrkhtspl
      121 aicvgdvsdi ehfavtdhlp hgllnsllpg pvtivlgrge ssilekslnp gldsigvrvp
      181 dsdfiriiar gsgsalalts anlsgqpssv sikdfenlwe hcayvyeggv lpagragstv
      241 vdltkpgkyr ilrpgsakee tvailenysl lekc
//
LOCUS       XP_016717869             166 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L12-3 [Gossypium hirsutum].
ACCESSION   XP_016717869
VERSION     XP_016717869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..166
                     /product="60S ribosomal protein L12-3"
                     /calculated_mol_wt=17790
     Region          1..166
                     /region_name="PLN03072"
                     /note="60S ribosomal protein L12; Provisional"
                     /db_xref="CDD:178621"
     CDS             1..166
                     /gene="LOC107930650"
                     /coded_by="XM_016862380.2:129..629"
                     /db_xref="GeneID:107930650"
ORIGIN      
        1 mppkfdptqv vdvfvrvtgg evgaasslap kigplglspk kigediaket akewkglrit
       61 vkltvqnrqa kvtvvpsaaa lvikalkepe rdrkktknik hngnislddv ieiakvmrpr
      121 smakdmkgtv keilgtcvsv gctvdgkdpk dlqqeiddgd vdlple
//
LOCUS       XP_016717596             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016717596
VERSION     XP_016717596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016862107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..168
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18984
     Region          13..168
                     /region_name="Senescence_reg"
                     /note="Senescence regulator; pfam04520"
                     /db_xref="CDD:461341"
     CDS             1..168
                     /gene="LOC107930409"
                     /coded_by="XM_016862107.2:133..639"
                     /db_xref="GeneID:107930409"
ORIGIN      
        1 masnrsyysr flssdqqlqa mlsrdsvgfe ldesdiynht vtarsdspef rssrvtkkps
       61 tkrgggesrv ggtpaslpvn vpdwskilre eyrgnrkrse sneddddveg ddwleggvri
      121 ppheflakqm artriasysl hegrgrtlkg rdlrrvrnai fektgfqd
//
LOCUS       XP_016717477             836 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein REVOLUTA [Gossypium hirsutum].
ACCESSION   XP_016717477
VERSION     XP_016717477.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861988.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016717477.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..836
                     /product="homeobox-leucine zipper protein REVOLUTA"
                     /calculated_mol_wt=91538
     Region          25..81
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          <75..114
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Site            order(81,84..85,88..89,91..92,95..96,98..99,102..103,
                     105..106,109..110,112..113)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     Region          156..372
                     /region_name="START_ArGLABRA2_like"
                     /note="C-terminal lipid-binding START domain of the
                     Arabidopsis homeobox protein GLABRA 2 and related
                     proteins; cd08875"
                     /db_xref="CDD:176884"
     Site            order(184..185,193,208,210,221,225,229,232..233,234..235,
                     258,260..263,266,269,271,273,289,310,312..315,317,329,331,
                     333,335,337,339,347,349..351,353..355,358..359,362)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176884"
     Region          691..835
                     /region_name="MEKHLA"
                     /note="MEKHLA domain; pfam08670"
                     /db_xref="CDD:462555"
     CDS             1..836
                     /gene="LOC107930325"
                     /coded_by="XM_016861988.2:444..2954"
                     /db_xref="GeneID:107930325"
ORIGIN      
        1 mamamthhhn ressidkhld tgksvrytae qvealervya ecpkpsslrr qqlirecpil
       61 sniepkqikv wfqnrrcrek qrkeasrlqt vnrkltamnk llmeendrlq kqvsqlvcen
      121 gymrqqlhtv nasatdascd savttpqhsl rnannpagll siaeetlaef lskatgtavn
      181 wvqmpgmkpg pdsvgifais qscsgmaara cglvsleptk iaeilkdrps wfrdcrklev
      241 ftmfpagngg tielvytqmf apttlapard fwtlryttts engslvvcer slsgsgagps
      301 vasaaqfvra evlpsgylir pcegggsiih ivdhlnleaw svpevlrply essrviaqkm
      361 tipalryvrq iaqetsgevv yslgrqpavl rtfsqrlsrg fneaingfne dgwsimncdg
      421 tedviiains gkslsnssnl ttglsflggv lcakasmllq nvppavlvrf lrehrlewad
      481 fnvdaysaas lkagtytypg mrptsftgsq iimplgqtve heellevirl egqsltqeda
      541 flsrdihllq icsgiddnav gacselvfap idemfpddaa llpsgfriip leskpdslat
      601 nrtldltssl evgpatsqaa gdspsqnars vltiafqfpf dtnlqdnvat marqyvrsvi
      661 ssvqrvamai spcgssptig pkpspgspea ltlahwicqs ysfhlgeell kseslggdsv
      721 lknlwqhqda ilccslksvp vfifanqagl dmlettlval qditldkifd elgrkalcfd
      781 ftklmqqgft hllagvcmst mgrhvsyeqa vawkvlaada ktvhclafsf inwsfv
//
LOCUS       XP_040941904             821 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040941904
VERSION     XP_040941904.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085970.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..821
                     /product="serine/threonine-protein phosphatase 6
                     regulatory subunit 3 isoform X1"
                     /calculated_mol_wt=91353
     Region          129..491
                     /region_name="SAPS"
                     /note="SIT4 phosphatase-associated protein; pfam04499"
                     /db_xref="CDD:398279"
     Region          <552..>741
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..821
                     /gene="LOC107930246"
                     /coded_by="XM_041085970.1:289..2754"
                     /db_xref="GeneID:107930246"
ORIGIN      
        1 mfwrltsmsa yspvesildk enftleelld eeeiiqecka lnsrlinflr draqveqllr
       61 yiveepsedd dskrtfkfpf iaceiftcei dvilktlied eefmnllfsf letnrshsal
      121 lagyfskvvi clmlrktipl mhyvqthqev lrqlvdligi tsimevlvrl vgaddhvypn
      181 fldvmqwlad snllemivdk lnpscppevh gnaaetlcai trnapsalat klsspsfvar
      241 ifghaledsh skyglvhsls vcislldpkr saiasplmhy frnqhmyepp ipvnpetina
      301 mlpklgdllm llnvssdeki lpttygelrp plgkhrlkiv efiavllrtg neaaekelvg
      361 sgtiqrvldl ffeypynnal hhhvesiils cleskndail dhllhkcdli grflqtekqp
      421 ilsgdnnlpt lpaagkcapr agnighitri snklvqlgss nsciqayiqe nsewnewqan
      481 vlqernaven ayrwacgrpt slqdrtrdsd eddihdrdyd vaalannlsq afrykiygnd
      541 nneedrgald rddedinfdd esaevvissl rlgddqgssl ftnsnwfafq degtsnvpma
      601 isptevmhei nlngttnsnn sssddevvvg eddemnenst stsnpmngfs nsvssgdlnp
      661 qenenlfggr pspsglqvvg ssknpflddd npdvnppspi dtvmtdgesl pngesilpng
      721 ssdamdsseg smssdmsqks pplvpslfee dvefvgvele gtekpmeqal kegivgeara
      781 lkrngsgipi pekeksdest gikefndsny wrvdhevtvl e
//
LOCUS       XP_040941905             820 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040941905
VERSION     XP_040941905.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085971.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..820
                     /product="serine/threonine-protein phosphatase 6
                     regulatory subunit 3 isoform X2"
                     /calculated_mol_wt=91266
     Region          129..491
                     /region_name="SAPS"
                     /note="SIT4 phosphatase-associated protein; pfam04499"
                     /db_xref="CDD:398279"
     Region          <522..>740
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..820
                     /gene="LOC107930246"
                     /coded_by="XM_041085971.1:274..2736"
                     /db_xref="GeneID:107930246"
ORIGIN      
        1 mfwrltsmsa yspvesildk enftleelld eeeiiqecka lnsrlinflr draqveqllr
       61 yiveepsedd dskrtfkfpf iaceiftcei dvilktlied eefmnllfsf letnrshsal
      121 lagyfskvvi clmlrktipl mhyvqthqev lrqlvdligi tsimevlvrl vgaddhvypn
      181 fldvmqwlad snllemivdk lnpscppevh gnaaetlcai trnapsalat klsspsfvar
      241 ifghaledsh skyglvhsls vcislldpkr saiasplmhy frnqhmyepp ipvnpetina
      301 mlpklgdllm llnvssdeki lpttygelrp plgkhrlkiv efiavllrtg neaaekelvg
      361 sgtiqrvldl ffeypynnal hhhvesiils cleskndail dhllhkcdli grflqtekqp
      421 ilsgdnnlpt lpaagkcapr agnighitri snklvqlgss nsciqayiqe nsewnewqan
      481 vlqernaven ayrwacgrpt slqdrtrdsd eddihdrdyd vaalannlsq afrykiygnd
      541 nneedrgald rddedinfdd esaevvissl rlgddqgslf tnsnwfafqd egtsnvpmai
      601 sptevmhein lngttnsnns ssddevvvge ddemnensts tsnpmngfsn svssgdlnpq
      661 enenlfggrp spsglqvvgs sknpfldddn pdvnppspid tvmtdgeslp ngesilpngs
      721 sdamdssegs mssdmsqksp plvpslfeed vefvgveleg tekpmeqalk egivgearal
      781 krngsgipip ekeksdestg ikefndsnyw rvdhevtvle
//
LOCUS       XP_016717256             654 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin response factor 18 [Gossypium hirsutum].
ACCESSION   XP_016717256
VERSION     XP_016717256.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861767.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016717256.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..654
                     /product="auxin response factor 18"
                     /calculated_mol_wt=72453
     Region          111..212
                     /region_name="B3"
                     /note="B3 DNA binding domain; pfam02362"
                     /db_xref="CDD:396783"
     Site            order(113,116,124,127,129,164,175,177..178,180..181)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          245..329
                     /region_name="Auxin_resp"
                     /note="Auxin response factor; pfam06507"
                     /db_xref="CDD:428981"
     CDS             1..654
                     /gene="LOC107930156"
                     /coded_by="XM_016861767.2:128..2092"
                     /db_xref="GeneID:107930156"
ORIGIN      
        1 meleksldpn lwhacagsmv qippinskvy yfpqghaehs lnsvdfpfsr qfpplvlcrv
       61 dsvkfmadve tdevyakiml tplqnnkpdv gdddgvsngg cnniekkaas faktltqsda
      121 nngggfsvpr ycaetifpal dysadppvqt vvavdvhgql wkfrhiyrgt prrhllttgw
      181 safvnrkklv agdsvvflra enggirvgir raklgigdgd cygslgfygd skrngkvkpe
      241 evleaakaas ggrkpfevvy yprtsrpefc vrasavntam kvprccgmrf kmafetedss
      301 riswfvgtis svqvadpvrw pdspwrllev twdepdllqn vnrvnpwsve lasnvpaihl
      361 spflrpmkkl rlpqhldgll vqsfpskpls psnpfyrlsd nahvgiqgar qvqfglpisd
      421 lhlknnlnsg lclsgfqrfd lhdrtpdtft nscnnlscnk skipkkcrfl lfgqpilteq
      481 qlsqssssea vsevvsgnsc ktkdssngsg svignqfspe ksstarflwd rdnraiepcm
      541 dtghckvfme sedvgrtldl svldsyedly rrlanmfgie rskmsghvly rdatgavkrt
      601 gdepfsafmk itkrltirmd ssnntiersr ltgtrtaeng fhgsnktgpl smfa
//
LOCUS       XP_016717156             210 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 11 [Gossypium hirsutum].
ACCESSION   XP_016717156
VERSION     XP_016717156.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861667.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016717156.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..210
                     /product="GATA transcription factor 11"
                     /calculated_mol_wt=23468
     Region          121..155
                     /region_name="GATA"
                     /note="GATA zinc finger; pfam00320"
                     /db_xref="CDD:425605"
     Site            order(121,124,143,146)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(130..131,133,143..153)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..210
                     /gene="LOC107930071"
                     /coded_by="XM_016861667.2:1..633"
                     /db_xref="GeneID:107930071"
ORIGIN      
        1 mdvkgsswfq tsspvsvlds hisssganri pinpnlsfqg krcrtnrrra stlnspftlp
       61 fvsstfstsq rfyfpvgsks esvshlsqkp tkkrlkkknl kllsgfsesn nssqqlvirk
      121 cghcevtetp qwrkgpmgsk tlcnacgvry rsgrlfpeyr pagsptfias lhsnshkkvv
      181 emrrksqftg dsnnirvvnp tetslryqly
//
LOCUS       XP_040941906             384 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941906
VERSION     XP_040941906.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085972.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..384
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44244
     Region          90..374
                     /region_name="DUF707"
                     /note="Protein of unknown function (DUF707); pfam05212"
                     /db_xref="CDD:461590"
     CDS             1..384
                     /gene="LOC107948839"
                     /coded_by="XM_041085972.1:214..1368"
                     /db_xref="GeneID:107948839"
ORIGIN      
        1 matihrsgvi kktkdsarfi ittiigfalg ffigssfpff shykvylpss hrssidvata
       61 sndqglfvvk spqtnvvdvp igpkkyirrn prgskllppr invpesdlhl rrlyglppld
      121 lkrkpkylaa fsvgihqmyn idacvkkfse dfqivlfhyd gkttewdqfe wskkaihvta
      181 skqtkwwyak rflhpdvvaa yeyifiwded lgvehfnadr yielvkkhgl eisqpglgpn
      241 dvvtwemtrr redqevhkvs lerpgwcsdq hlppcaafve imapvfsrea wrcvwymiqn
      301 dlvhgwgldf alrrcvepah ekigvvdsew iihkvipslv nqgvtkfeks rrqevrirck
      361 selsifqdrl anadmayhaq fgng
//
LOCUS       XP_040941907             384 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941907
VERSION     XP_040941907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085973.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..384
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44244
     Region          90..374
                     /region_name="DUF707"
                     /note="Protein of unknown function (DUF707); pfam05212"
                     /db_xref="CDD:461590"
     CDS             1..384
                     /gene="LOC107948839"
                     /coded_by="XM_041085973.1:375..1529"
                     /db_xref="GeneID:107948839"
ORIGIN      
        1 matihrsgvi kktkdsarfi ittiigfalg ffigssfpff shykvylpss hrssidvata
       61 sndqglfvvk spqtnvvdvp igpkkyirrn prgskllppr invpesdlhl rrlyglppld
      121 lkrkpkylaa fsvgihqmyn idacvkkfse dfqivlfhyd gkttewdqfe wskkaihvta
      181 skqtkwwyak rflhpdvvaa yeyifiwded lgvehfnadr yielvkkhgl eisqpglgpn
      241 dvvtwemtrr redqevhkvs lerpgwcsdq hlppcaafve imapvfsrea wrcvwymiqn
      301 dlvhgwgldf alrrcvepah ekigvvdsew iihkvipslv nqgvtkfeks rrqevrirck
      361 selsifqdrl anadmayhaq fgng
//
LOCUS       XP_016743643             274 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha carbonic anhydrase 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016743643
VERSION     XP_016743643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888154.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..274
                     /product="alpha carbonic anhydrase 7 isoform X1"
                     /calculated_mol_wt=31252
     Region          45..262
                     /region_name="alpha_CA_prokaryotic_like"
                     /note="Carbonic anhydrase alpha, prokaryotic-like
                     subfamily. Carbonic anhydrases (CAs) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism: a nucleophilic attack of
                     a zinc-bound hydroxide ion on carbon...; cd03124"
                     /db_xref="CDD:239398"
     Site            order(100,124,126,128,132,145,214)
                     /site_type="active"
                     /db_xref="CDD:239398"
     Site            order(126,128,145)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239398"
     CDS             1..274
                     /gene="LOC107952943"
                     /coded_by="XM_016888154.2:5..829"
                     /db_xref="GeneID:107952943"
ORIGIN      
        1 maklqmkplv cilfiviilq hsrpttsqev edesefsyse nnergpsrwg diheewgacs
       61 ngtmqspidm fnqrvqivsh lgklkrsykp anatlrnrgh dmmlrfdgea gaieingtey
      121 alqqchwhsp sehtingrrf dleahlvhes adgkiavigi mykigrpdpf llsleehlta
      181 itdtteaera vgvmnprgik fgsrkyyryi gsltvppcte nvvwsfvqkv rtvtreqvrl
      241 lrvavhddsd tnarplqpin erwiqlfrpd dken
//
LOCUS       XP_016743652             249 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha carbonic anhydrase 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016743652
VERSION     XP_016743652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..249
                     /product="alpha carbonic anhydrase 7 isoform X2"
                     /calculated_mol_wt=28482
     Region          20..237
                     /region_name="alpha_CA_prokaryotic_like"
                     /note="Carbonic anhydrase alpha, prokaryotic-like
                     subfamily. Carbonic anhydrases (CAs) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism: a nucleophilic attack of
                     a zinc-bound hydroxide ion on carbon...; cd03124"
                     /db_xref="CDD:239398"
     Site            order(75,99,101,103,107,120,189)
                     /site_type="active"
                     /db_xref="CDD:239398"
     Site            order(101,103,120)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239398"
     CDS             1..249
                     /gene="LOC107952943"
                     /coded_by="XM_016888163.2:1..750"
                     /db_xref="GeneID:107952943"
ORIGIN      
        1 mqeyvedese fsysennerg psrwgdihee wgacsngtmq spidmfnqrv qivshlgklk
       61 rsykpanatl rnrghdmmlr fdgeagaiei ngteyalqqc hwhspsehti ngrrfdleah
      121 lvhesadgki avigimykig rpdpfllsle ehltaitdtt eaeravgvmn prgikfgsrk
      181 yyryigsltv ppctenvvws fvqkvrtvtr eqvrllrvav hddsdtnarp lqpinerwiq
      241 lfrpddken
//
LOCUS       XP_016717055            1110 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 28 [Gossypium hirsutum].
ACCESSION   XP_016717055
VERSION     XP_016717055.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861566.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016717055.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1110
                     /product="ABC transporter G family member 28"
                     /calculated_mol_wt=122455
     Region          500..726
                     /region_name="ABCG_EPDR"
                     /note="Eye pigment and drug resistance transporter
                     subfamily G of the ATP-binding cassette superfamily;
                     cd03213"
                     /db_xref="CDD:213180"
     Site            536..543
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213180"
     Site            order(539..540,542..544,583,667..668,700)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213180"
     Site            580..583
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213180"
     Site            643..652
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213180"
     Site            663..668
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213180"
     Site            671..674
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213180"
     Site            696..702
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213180"
     Region          700..1110
                     /region_name="ABC2_membrane_7"
                     /note="ABC-2 type transporter; pfam19055"
                     /db_xref="CDD:465963"
     CDS             1..1110
                     /gene="LOC107929985"
                     /coded_by="XM_016861566.2:117..3449"
                     /db_xref="GeneID:107929985"
ORIGIN      
        1 mtknkiqtwk flyvliliss flvivvcqee deasgdkfgn saaatemfsq yassrftnls
       61 sslkddikak fsfcitdvet dwnaafnfsk npkflsecar stkgdmmkrv ctaaevkfyf
      121 ssfyqsggea kkssflkpnk ncnltswvsg cepgwacsag kqqkinlkns teipyrvqnc
      181 saccegffcp rgitcmipcp lgaycplasl ntstgvcdpy ryqlppdnpd htcggadtwa
      241 dvmsssevfc sggsycpsti qkipcskghy crtgstsell cfrfatcnpk sanqnitayg
      301 lmlfaglgfl iviiyncsdq viatrekkke lsrekavqsv retaqarekw tsakeiakkh
      361 aiglqtsfsr tfsrrkslkh pasqakpaaa daaglpptvs tgtsqqpqkk ekgnltkmlh
      421 eiednpeshe gfnidigdkq gkknppkgkq lhtqsqmfry aygqiekeka lqeqnknltf
      481 sgvismanev delirkrfti eivfkdltit lkgknihlmr svsgklspgr vsavmgpsga
      541 gkttflsalt gkapgcvmtg svqingkdes iqaykkiigf vpqddivhgn ltvaenlwfs
      601 arcrlpadla kpekvlvver vieslglqav rdslvgtvek rgisggqrkr vnvglemvme
      661 psllildept sgldssssql llralrreal egvnicmvvh qpsytlyrmf ddlillakgg
      721 ltvyhgpvkk aeeyfaglgi nlpdranppd yfidilegit klntgtgltv kqlpvrwmlh
      781 ngysvpmdml nsiegmsgks gessshggss ahatgseqns fagelwqdvk csvetkkdrl
      841 qhnifksadl serttpgvft qyryylgrll kqrlrevrtq vvdylillla giclgtlaev
      901 sdetfgamgy tytvigvsll ckiaalrsfg ldklhywrer ssgmsslayf lakdtidhfn
      961 tvikplvyls mfyffnnprs svydnyfvlv clvycvtgia yilsilfdpg qaqlwsvllp
     1021 vvltliatqg gdsktvdfig dlcytkwale afvvsnakmy sgvwvitrcg sllqygyalk
     1081 nfgrclvllv ltgilsriva ffcmvtfqkr
//
LOCUS       XP_016716722             556 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016716722
VERSION     XP_016716722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..556
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=62886
     Region          28..108
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     Region          347..473
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..556
                     /gene="LOC107929697"
                     /coded_by="XM_016861233.2:158..1828"
                     /db_xref="GeneID:107929697"
ORIGIN      
        1 mafdggvgfk fmdsqaalsl eirkkklsgl qkrealekev smlqnmlnqe ekmheiltqf
       61 qlqedgssis ipdflppkmk elltelamve seiahletqi sqlkhglnqe heviitkekt
      121 pskqknpimq dqqenivfet kalhfiskai kgdytltdfm slnetmgnsg alfqekipkk
      181 igyfktresi veanldlppk spssklivek nshnwhpnkl senimkclhf ifvrllrtsr
      241 amelekstnv trsmntplss rsfrventln pksnpqkklr qqdpygifnm egsiprdigp
      301 yknlaiftss smdpkcisss ssipllkklr vlmsnlqkvd lraltyqqkl afwinmynac
      361 imhgylqygl pdtsedllam mnkatldvgg nkisaqameh hilrkqstgs kiqegsdked
      421 dgeatirkly gleltdrnvt falccgtrss pavriytgdg vstelekskq eylqasimvs
      481 ntkkiafpel llnnmfdfav dmnslvqwvc qqlptsgslr ksmvdcyrnh nagktsspis
      541 vekipydfef qyllam
//
LOCUS       XP_016716775             539 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016716775
VERSION     XP_016716775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861286.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..539
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=60862
     Region          23..91
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     Region          330..456
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..539
                     /gene="LOC107929697"
                     /coded_by="XM_016861286.2:161..1780"
                     /db_xref="GeneID:107929697"
ORIGIN      
        1 mafdggvgfk fmdsqaalsl eivsmlqnml nqeekmheil tqfqlqedgs sisipdflpp
       61 kmkelltela mveseiahle tqisqlkhgl nqeheviitk ektpskqknp imqdqqeniv
      121 fetkalhfis kaikgdytlt dfmslnetmg nsgalfqeki pkkigyfktr esiveanldl
      181 ppkspsskli veknshnwhp nklsenimkc lhfifvrllr tsrameleks tnvtrsmntp
      241 lssrsfrven tlnpksnpqk klrqqdpygi fnmegsiprd igpyknlaif tsssmdpkci
      301 sssssipllk klrvlmsnlq kvdlraltyq qklafwinmy nacimhgylq yglpdtsedl
      361 lammnkatld vggnkisaqa mehhilrkqs tgskiqegsd keddgeatir klygleltdr
      421 nvtfalccgt rsspavriyt gdgvstelek skqeylqasi mvsntkkiaf pelllnnmfd
      481 favdmnslvq wvcqqlptsg slrksmvdcy rnhnagktss pisvekipyd fefqyllam
//
LOCUS       XP_016716882             413 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016716882
VERSION     XP_016716882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..413
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=46285
     Region          28..108
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     Region          215..330
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..413
                     /gene="LOC107929697"
                     /coded_by="XM_016861393.2:164..1405"
                     /db_xref="GeneID:107929697"
ORIGIN      
        1 mafdggvgfk fmdsqaalsl eirkkklsgl qkrealekev smlqnmlnqe ekmheiltqf
       61 qlqedgssis ipdflppkmk elltelamve seiahletqi sqlkhglnqe heviitkekt
      121 pskqknpimq dqqenivfet kalhfiskai kgdytltdfm slnetmgnsg alfqekipkk
      181 igyfkgldeq spesgfkgin lpaeisildq hvqclyyaci gylqyglpdt sedllammnk
      241 atldvggnki saqamehhil rkqstgskiq egsdkeddge atirklygle ltdrnvtfal
      301 ccgtrsspav riytgdgvst elekskqeyl qasimvsntk kiafpellln nmfdfavdmn
      361 slvqwvcqql ptsgslrksm vdcyrnhnag ktsspisvek ipydfefqyl lam
//
LOCUS       XP_016716957             404 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016716957
VERSION     XP_016716957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861468.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..404
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=45228
     Region          28..108
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     Region          211..321
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..404
                     /gene="LOC107929697"
                     /coded_by="XM_016861468.2:163..1377"
                     /db_xref="GeneID:107929697"
ORIGIN      
        1 mafdggvgfk fmdsqaalsl eirkkklsgl qkrealekev smlqnmlnqe ekmheiltqf
       61 qlqedgssis ipdflppkmk elltelamve seiahletqi sqlkhglnqe heviitkekt
      121 pskqknpimq dqqenivfet kalhfiskai kgdytltdfm slnetmgnsg alfqekipkk
      181 igyfkgldeq spesgfkgin lpaeisildq hgylqyglpd tsedllammn katldvggnk
      241 isaqamehhi lrkqstgski qegsdkeddg eatirklygl eltdrnvtfa lccgtrsspa
      301 vriytgdgvs telekskqey lqasimvsnt kkiafpelll nnmfdfavdm nslvqwvcqq
      361 lptsgslrks mvdcyrnhna gktsspisve kipydfefqy llam
//
LOCUS       XP_040941908             588 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich extensin-like protein EPR1 [Gossypium hirsutum].
ACCESSION   XP_040941908
VERSION     XP_040941908.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085974.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..588
                     /product="proline-rich extensin-like protein EPR1"
                     /calculated_mol_wt=63580
     CDS             1..588
                     /gene="LOC121212697"
                     /coded_by="XM_041085974.1:52..1818"
                     /db_xref="GeneID:121212697"
ORIGIN      
        1 makalvfsff ivlltftiis sslptnalls cfqrcqrred citqlvclng icldsplsit
       61 ktclvirspp pppprpktpp pishpplrap pppppppppr lntpppvslp plrtpplpsp
      121 spppprpnip ppvslpplra ppppsppppr pntpppislp plrtppppsp rpntpppvsl
      181 pplrappppp prsntpppvs lpplrapspp pipppsmnqp lppplsppin qpslppfspp
      241 tnqpspppls ppvnqpspsp nsitpppfsp pmnqpsplpl ppsinqpspp pfsppmnqps
      301 ppplpppmnq pspppfsppm nepsppplsp pmnqptpppf sppmnqpspp pfsppmneps
      361 ppplsppmnq pssppfsppm nepsppmnqp spppfsppmn epshpplspp mnqpspppys
      421 ppmnepspqp fsppmdqplp phfsppmdqp sppsfsppkn epsppplspp mnqpspsals
      481 prrtpppppp psapsprrtp phrlhlqlhh qeghhhhhhr lhlqlhhqgg hhhrhhhhlq
      541 lhhqeghhhh hhlhlqlhhq gghhhhrlhl qlhhqgghnh lhhqghin
//
LOCUS       XP_016716335             345 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016716335
VERSION     XP_016716335.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860846.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 12 isoform X1"
                     /calculated_mol_wt=39293
     Region          181..312
                     /region_name="OTU_plant_OTU9-like"
                     /note="OTU (ovarian tumor) domain of plant
                     deubiquitinating enzyme OTU9 and similar proteins;
                     cd22751"
                     /db_xref="CDD:438588"
     Site            order(201,246,249,256..259,284,286,302,306..308)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438588"
     CDS             1..345
                     /gene="LOC107929404"
                     /coded_by="XM_016860846.2:239..1276"
                     /db_xref="GeneID:107929404"
ORIGIN      
        1 mityeqehdf vnwglqlfns dpyancgydg vvtqedeehy pvnyfedhyg ageccnvend
       61 eaiahtlqlq elsqlaises snkvsgypqd cvdqsigdfs sgqncgqevq detgpssscs
      121 speeklvsev dwlyslelan eyaldgevgk rlnqmvpvph vpringeips vdeatldhqr
      181 llerlqvynl velkvegdgn cqfralsdqf yrspehhefl rqqivnqlks ypdiyegyvl
      241 maygdylekm sksgewgdhv tlqaaadlyg vkifvitsfk dtcyieilpn vkkskrvifl
      301 sfwaevhyns iypfgdvpgf gmtkkkkkkg rmfqnkhfes pdeyq
//
LOCUS       XP_016716465             345 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016716465
VERSION     XP_016716465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860976.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 12 isoform X1"
                     /calculated_mol_wt=39293
     Region          181..312
                     /region_name="OTU_plant_OTU9-like"
                     /note="OTU (ovarian tumor) domain of plant
                     deubiquitinating enzyme OTU9 and similar proteins;
                     cd22751"
                     /db_xref="CDD:438588"
     Site            order(201,246,249,256..259,284,286,302,306..308)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438588"
     CDS             1..345
                     /gene="LOC107929404"
                     /coded_by="XM_016860976.2:163..1200"
                     /db_xref="GeneID:107929404"
ORIGIN      
        1 mityeqehdf vnwglqlfns dpyancgydg vvtqedeehy pvnyfedhyg ageccnvend
       61 eaiahtlqlq elsqlaises snkvsgypqd cvdqsigdfs sgqncgqevq detgpssscs
      121 speeklvsev dwlyslelan eyaldgevgk rlnqmvpvph vpringeips vdeatldhqr
      181 llerlqvynl velkvegdgn cqfralsdqf yrspehhefl rqqivnqlks ypdiyegyvl
      241 maygdylekm sksgewgdhv tlqaaadlyg vkifvitsfk dtcyieilpn vkkskrvifl
      301 sfwaevhyns iypfgdvpgf gmtkkkkkkg rmfqnkhfes pdeyq
//
LOCUS       XP_040941909             345 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040941909
VERSION     XP_040941909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085975.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 12 isoform X1"
                     /calculated_mol_wt=39293
     Region          181..312
                     /region_name="OTU_plant_OTU9-like"
                     /note="OTU (ovarian tumor) domain of plant
                     deubiquitinating enzyme OTU9 and similar proteins;
                     cd22751"
                     /db_xref="CDD:438588"
     Site            order(201,246,249,256..259,284,286,302,306..308)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438588"
     CDS             1..345
                     /gene="LOC107929404"
                     /coded_by="XM_041085975.1:68..1105"
                     /db_xref="GeneID:107929404"
ORIGIN      
        1 mityeqehdf vnwglqlfns dpyancgydg vvtqedeehy pvnyfedhyg ageccnvend
       61 eaiahtlqlq elsqlaises snkvsgypqd cvdqsigdfs sgqncgqevq detgpssscs
      121 speeklvsev dwlyslelan eyaldgevgk rlnqmvpvph vpringeips vdeatldhqr
      181 llerlqvynl velkvegdgn cqfralsdqf yrspehhefl rqqivnqlks ypdiyegyvl
      241 maygdylekm sksgewgdhv tlqaaadlyg vkifvitsfk dtcyieilpn vkkskrvifl
      301 sfwaevhyns iypfgdvpgf gmtkkkkkkg rmfqnkhfes pdeyq
//
LOCUS       XP_016716543             345 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016716543
VERSION     XP_016716543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..345
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 12 isoform X1"
                     /calculated_mol_wt=39293
     Region          181..312
                     /region_name="OTU_plant_OTU9-like"
                     /note="OTU (ovarian tumor) domain of plant
                     deubiquitinating enzyme OTU9 and similar proteins;
                     cd22751"
                     /db_xref="CDD:438588"
     Site            order(201,246,249,256..259,284,286,302,306..308)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438588"
     CDS             1..345
                     /gene="LOC107929404"
                     /coded_by="XM_016861054.2:239..1276"
                     /db_xref="GeneID:107929404"
ORIGIN      
        1 mityeqehdf vnwglqlfns dpyancgydg vvtqedeehy pvnyfedhyg ageccnvend
       61 eaiahtlqlq elsqlaises snkvsgypqd cvdqsigdfs sgqncgqevq detgpssscs
      121 speeklvsev dwlyslelan eyaldgevgk rlnqmvpvph vpringeips vdeatldhqr
      181 llerlqvynl velkvegdgn cqfralsdqf yrspehhefl rqqivnqlks ypdiyegyvl
      241 maygdylekm sksgewgdhv tlqaaadlyg vkifvitsfk dtcyieilpn vkkskrvifl
      301 sfwaevhyns iypfgdvpgf gmtkkkkkkg rmfqnkhfes pdeyq
//
LOCUS       XP_016716616             320 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016716616
VERSION     XP_016716616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..320
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 12 isoform X2"
                     /calculated_mol_wt=36164
     Region          181..287
                     /region_name="OTU_plant_OTU9-like"
                     /note="OTU (ovarian tumor) domain of plant
                     deubiquitinating enzyme OTU9 and similar proteins;
                     cd22751"
                     /db_xref="CDD:438588"
     Site            order(201,221,224,231..234,259,261,277,281..283)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438588"
     CDS             1..320
                     /gene="LOC107929404"
                     /coded_by="XM_016861127.2:239..1201"
                     /db_xref="GeneID:107929404"
ORIGIN      
        1 mityeqehdf vnwglqlfns dpyancgydg vvtqedeehy pvnyfedhyg ageccnvend
       61 eaiahtlqlq elsqlaises snkvsgypqd cvdqsigdfs sgqncgqevq detgpssscs
      121 speeklvsev dwlyslelan eyaldgevgk rlnqmvpvph vpringeips vdeatldhqr
      181 llerlqvynl velkvegdgn cqlksypdiy egyvlmaygd ylekmsksge wgdhvtlqaa
      241 adlygvkifv itsfkdtcyi eilpnvkksk rviflsfwae vhynsiypfg dvpgfgmtkk
      301 kkkkgrmfqn khfespdeyq
//
LOCUS       XP_016716237             696 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA polymerase I termination factor [Gossypium hirsutum].
ACCESSION   XP_016716237
VERSION     XP_016716237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..696
                     /product="RNA polymerase I termination factor"
                     /calculated_mol_wt=79487
     Region          <373..>552
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          490..547
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     CDS             1..696
                     /gene="LOC107929324"
                     /coded_by="XM_016860748.2:297..2387"
                     /db_xref="GeneID:107929324"
ORIGIN      
        1 mgkkmrekdg hksenkqtee vnsiekeidv lngvpkssnr dddknkikdr tkkrktefdt
       61 dkkesknthk khktnkdave eipietclgg kenaeqesrk vmnlenngea krvkkdkhkk
      121 nrdetdavat vtetlkhskk esekahkkhe kskdevkeis venclggkkn teqesskamn
      181 lenkgeakrv gkdkhkkddk dginavgtvt gtlehskkes pkarkkkkdv veeismetcl
      241 ggkenaekes skvvnlgnng eaekvgedkh krknkvgida vatvtetieh skmqepvetd
      301 vckkqkkkqk lekvngnvad diaapssttd kkgtgrenss gnelerkklr diggddeegn
      361 krkkkksksv endtdqvena tlkdnskkvs fsdqvevfps mddakkdkqg lvkgkrfske
      421 edeivmnava eyieshnlgd eglnmvlncg shkevrrcwn eiqaaipwrp vesvynrahv
      481 lferdekrpw tpeeyemvkk fvekhgrnwr llgdtlgkhr hhvkdtwrri sanakkgqws
      541 qdeyqklfdl vnldlcmkat qerkskygml rdnicwtaig nkmetrafvs ccskwyrnlt
      601 spmvaeglwa dvddyrmlda lssldaccme dvnwdnileh rsgdlcrkrw sqmvqrlgsn
      661 knlsfaeqvd ilaeryrpdm iearetfdsk qpvdlp
//
LOCUS       XP_040941910             586 aa            linear   PLN 06-AUG-2024
DEFINITION  ruBisCO large subunit-binding protein subunit alpha [Gossypium
            hirsutum].
ACCESSION   XP_040941910
VERSION     XP_040941910.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085976.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..586
                     /product="ruBisCO large subunit-binding protein subunit
                     alpha"
                     /calculated_mol_wt=61765
     Region          49..569
                     /region_name="GroEL"
                     /note="GroEL_like type I chaperonin. Chaperonins are
                     involved in productive folding of proteins. They share a
                     common general morphology, a double toroid of 2 stacked
                     rings, each composed of 7-9 subunits. The symmetry of type
                     I is seven-fold and they are found...; cd03344"
                     /db_xref="CDD:239460"
     Site            order(49,53,70,81..84,86,90..91,93,103,105,113,117,120,
                     241,273,301,428,430,505,559,562..568)
                     /site_type="other"
                     /note="ring oligomerisation interface [polypeptide
                     binding]"
                     /db_xref="CDD:239460"
     Site            order(76..78,131,135,194,442,459,500,539,541)
                     /site_type="other"
                     /note="ATP/Mg binding site [chemical binding]"
                     /db_xref="CDD:239460"
     Site            order(153,480,498,507,509..510,513)
                     /site_type="active"
                     /note="stacking interactions [active]"
                     /db_xref="CDD:239460"
     Site            order(185,230,237,419,453..454)
                     /site_type="other"
                     /note="hinge regions"
                     /db_xref="CDD:239460"
     CDS             1..586
                     /gene="LOC107929232"
                     /coded_by="XM_041085976.1:266..2026"
                     /db_xref="GeneID:107929232"
ORIGIN      
        1 masanalssa silcspnkgs lrrkgnqrqn qrvnyrqgnn rfgvkacake iafdqssraa
       61 mqagidklad avgltlgprg rnvvldefgs pkvvndgvti araielpnam enagaalire
      121 vasktndsag dgtttasvla reiiklgllt vtsganpvsv krgidktvqs lieelekkar
      181 pvkgrddika vasisagndd ligtmvadai dkvgpdgvls iessssfett vdveegmeid
      241 rgyispqfvt npeklicefe narvlvtdqk itaikdiipl lekttqlrap lliiaedvtg
      301 ealatlvvnk lrgilnvaai kapsfgerrk avlqdiailt gaefqandlg llientsveq
      361 lgiarkviit kdstqiiada askdeiqarv qqlkkelaet dsvydtekla eriaklsggv
      421 avikvgaate teledrklri edaknatfaa ieegivpggg aalvhlstcv paikdkledp
      481 eerigadivq kalvapasli aqnagmegev vvekvknsew eigynamtdt yenllaagvi
      541 dpakvtrcal qnaasvagmv lttqaivvek akpkapaaaa peglti
//
LOCUS       XP_040941912             712 aa            linear   PLN 06-AUG-2024
DEFINITION  P-loop NTPase domain-containing protein LPA1 homolog 2 [Gossypium
            hirsutum].
ACCESSION   XP_040941912
VERSION     XP_040941912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085978.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..712
                     /product="P-loop NTPase domain-containing protein LPA1
                     homolog 2"
                     /calculated_mol_wt=78713
     Region          160..419
                     /region_name="Pgk2"
                     /note="2-phosphoglycerate kinase/Mevalonate-3-phosphate
                     5-kinase [Carbohydrate transport and metabolism, Lipid
                     transport and metabolism]; COG2074"
                     /db_xref="CDD:441677"
     CDS             1..712
                     /gene="LOC107929145"
                     /coded_by="XM_041085978.1:260..2398"
                     /db_xref="GeneID:107929145"
ORIGIN      
        1 mgesakvlyi vvvdegekgd etlsfrytrp vlqgtlqlmg ckarhafkis qrtfelitrk
       61 ssynsllqeg sktlnsdglk gntkkedihp tnfyrteags clvsgednrd ksipfelykr
      121 rtsivvtrkc fldvvcqaly eykyvgpser adlilacrir erkesitvll cgtsgcgkst
      181 lsallasrlg ittvistdsi rhmmrsfvde kenpllwast yhagecldpv avaqakakkk
      241 akklagtaqs fpkgeradgs saskcdaqpm esgsicteli gpkqiavegf kaqsemvids
      301 ldrlitawee rkesviiegv hlsltfvmgl mrkhpsiipf miyisnedkh lerfavraky
      361 mtldpaknky vkyiknirai qdylckradk hlvpkinntn vdrsvaaiha tvfscfrrhe
      421 ageplydpva ntvgviydey kkcaanslss kgmfqliqrq gssrqlmall ntdgsvakaw
      481 pvksvdsngr pisghmcpgg vglplygplq igkaepvnlq fgnfgisawp sdggtsrags
      541 vddlrcdaad tgsrhhsscg ssprmsdgpa kelkeeisef gsddeevddp pevdsdedfa
      601 drhkqfqeev gsvdegstks deeyddlame dmvenddrle dedrrgkviv ssedqatptk
      661 gdkasksdql svpreksekg farmrkrsls npdmkkhvsi indcilsrtp er
//
LOCUS       XP_040941913             137 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichol kinase EVAN isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941913
VERSION     XP_040941913.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085979.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..137
                     /product="dolichol kinase EVAN isoform X1"
                     /calculated_mol_wt=14524
     Region          <38..130
                     /region_name="SEC59"
                     /note="Dolichol kinase [Posttranslational modification,
                     protein turnover, chaperones, Cell wall/membrane/envelope
                     biogenesis]; COG0170"
                     /db_xref="CDD:439940"
     CDS             1..137
                     /gene="LOC107948301"
                     /coded_by="XM_041085979.1:353..766"
                     /db_xref="GeneID:107948301"
ORIGIN      
        1 msaftdhrds dilivshfsl llgcalpiwm ssgfndrpli pfagilslgi gdtmasmvgh
       61 kygvlrwskt gctaagivsv laacsvllpl lastgyiltq nwfplliavt tsglleayta
      121 qldnafiplv fysllcl
//
LOCUS       XP_040941914             134 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichol kinase EVAN isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941914
VERSION     XP_040941914.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085980.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="dolichol kinase EVAN isoform X2"
                     /calculated_mol_wt=14265
     Region          <38..127
                     /region_name="SEC59"
                     /note="Dolichol kinase [Posttranslational modification,
                     protein turnover, chaperones, Cell wall/membrane/envelope
                     biogenesis]; COG0170"
                     /db_xref="CDD:439940"
     CDS             1..134
                     /gene="LOC107948301"
                     /coded_by="XM_041085980.1:355..759"
                     /db_xref="GeneID:107948301"
ORIGIN      
        1 msaftdhrds dilivshfsl llgcalpiwm ssgfndrpli pfagilslgi gdtmasmvgh
       61 kygvlrwskt gsgivsvlaa csvllpllas tgyiltqnwf plliavttsg lleaytaqld
      121 nafiplvfys llcl
//
LOCUS       XP_040941915             140 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR50 [Gossypium hirsutum].
ACCESSION   XP_040941915
VERSION     XP_040941915.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085981.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..140
                     /product="auxin-responsive protein SAUR50"
                     /calculated_mol_wt=15883
     Region          <41..100
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..140
                     /gene="LOC107957646"
                     /coded_by="XM_041085981.1:1347..1769"
                     /db_xref="GeneID:107957646"
ORIGIN      
        1 maklnykkng ivklkvvaem lhkslslkkk wkhkearhgs nnvpddvkeg hfavvaehge
       61 eprrfvvpls ylthprflml leqaaeeygf dhkgaltipc cpselerila deqqqqgqer
      121 edpnanvtra tsyeamiqsy
//
LOCUS       XP_040941916             140 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR50 [Gossypium hirsutum].
ACCESSION   XP_040941916
VERSION     XP_040941916.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085982.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..140
                     /product="auxin-responsive protein SAUR50"
                     /calculated_mol_wt=15883
     Region          <41..100
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..140
                     /gene="LOC107957646"
                     /coded_by="XM_041085982.1:1051..1473"
                     /db_xref="GeneID:107957646"
ORIGIN      
        1 maklnykkng ivklkvvaem lhkslslkkk wkhkearhgs nnvpddvkeg hfavvaehge
       61 eprrfvvpls ylthprflml leqaaeeygf dhkgaltipc cpselerila deqqqqgqer
      121 edpnanvtra tsyeamiqsy
//
LOCUS       XP_016738288             219 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016738288
VERSION     XP_016738288.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016882799.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=24720
     CDS             1..219
                     /gene="LOC107948300"
                     /coded_by="XM_016882799.2:855..1514"
                     /db_xref="GeneID:107948300"
ORIGIN      
        1 mnealvqgll dcmdaknskw rtvplphetl grpfwlldwr lnqayawfpq eghfskedli
       61 aaqilgipct prlgpcdvdd wqffagnalp aqlnvanyer atprrfygaa eyrtiahrqw
      121 llpqaiiegc ahagskrpqp epssssggtg hmeitpavep qqqqqqqppt pprltsfyqy
      181 qltdwcyhgl vvfrlseqkq neafrsflft gsdamacld
//
LOCUS       XP_040941917             132 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter F family member 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941917
VERSION     XP_040941917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085983.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..132
                     /product="ABC transporter F family member 1 isoform X2"
                     /calculated_mol_wt=14750
     CDS             1..132
                     /gene="LOC107948300"
                     /coded_by="XM_041085983.1:166..564"
                     /db_xref="GeneID:107948300"
ORIGIN      
        1 mvsdasekka aqkkadngvd niadgdsalq isdrtctgdl cshpvsrdir ieslpvtfhg
       61 hdlivdsiqi apppaipnqa pnrtdlahia dsledeyyig ftrhrpcchr rytvlrsnel
      121 fnrlyvlyfd hf
//
LOCUS       XP_016748686             186 aa            linear   PLN 06-AUG-2024
DEFINITION  lactoylglutathione lyase [Gossypium hirsutum].
ACCESSION   XP_016748686
VERSION     XP_016748686.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748686.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..186
                     /product="lactoylglutathione lyase"
                     /calculated_mol_wt=20861
     Region          <3..181
                     /region_name="PLN02367"
                     /note="lactoylglutathione lyase"
                     /db_xref="CDD:177995"
     CDS             1..186
                     /gene="LOC107957651"
                     /coded_by="XM_016893197.2:274..834"
                     /db_xref="GeneID:107957651"
ORIGIN      
        1 massdlkesa annpglhttp deatkdyimq qtmyrikdpk vsldfysrvl gmsllkrvdv
       61 pelkftlyfm gyedvskaps dpygrtvwtf graatielth nwgtesdpef kgyhtgnsep
      121 rgfghigitv ddvnkacerf erlgvefvkk ldagkmkgia fikdpdgywi eifdlktigd
      181 visrcs
//
LOCUS       XP_016748687             437 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glucuronoxylan glucuronosyltransferase IRX7 [Gossypium
            hirsutum].
ACCESSION   XP_016748687
VERSION     XP_016748687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893198.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..437
                     /product="probable glucuronoxylan glucuronosyltransferase
                     IRX7"
                     /calculated_mol_wt=50159
     Region          81..379
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..437
                     /gene="LOC107957652"
                     /coded_by="XM_016893198.2:547..1860"
                     /db_xref="GeneID:107957652"
ORIGIN      
        1 mrilhkgrqs ekslffkyyk wvlwfsftly fltsffitnk plplsktrvs gsksslasrv
       61 lfesvnktrh kskpknpaaf kdlkifvyel pseynedwls nkrcsnhlfa sevaihralm
      121 ntydlrtfdp yeadfffvpv yvscnfstvn gfpaighars lissaiqlis snypfwnrtq
      181 gsdhifvash dygacfhame draiddgipd fmknsiilqt fgvnykhpcq dvehvvippy
      241 ippesvrntl ekapltgkrd imvffrgkme vhpknvsgkf ygkkvrteiw rryngdrrfy
      301 lqrqrfagyq seivrsvfcl cplgwapwsp rlvesvalgc vpviiadgiq lpfpsavkws
      361 eisltvaerd vgklgrileh vaktnlstiq knlwdpavsk allfnahmqe gdatwqvlgs
      421 lykkldrsyk rsrvssq
//
LOCUS       XP_016748688             219 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein subfamily 1 member 1 [Gossypium hirsutum].
ACCESSION   XP_016748688
VERSION     XP_016748688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="germin-like protein subfamily 1 member 1"
                     /calculated_mol_wt=23342
     Region          24..217
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(26,30..31,57..61,63..64,81,86,93..96,116,118,120,
                     122,128,130,132,138,140,142,145..149,151,154,170,172,174)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(78,97,99,107,110,112,117,156,169,173,180)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..219
                     /gene="LOC107957653"
                     /coded_by="XM_016893199.2:211..870"
                     /db_xref="GeneID:107957653"
ORIGIN      
        1 mkmcrlflql clgltllsgl akpdidplqd yciadtkspf ylngapclnp tlahsshftt
       61 salakagdtk anqfgfsvtl ttlanlpgin tmgltmarvd iaadglvpph shprasevti
      121 clqgvilvgf vdtsnrlftq klepgdsfvf prglihflyn mepkkpalai sglssqnpgt
      181 qiasraafvs nppipevvle kafqishqdv akirknlgg
//
LOCUS       XP_016748690             380 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 25 [Gossypium hirsutum].
ACCESSION   XP_016748690
VERSION     XP_016748690.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748690.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..380
                     /product="probable protein phosphatase 2C 25"
                     /calculated_mol_wt=41130
     Region          123..376
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(133,137..138,159..161,321,367)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..380
                     /gene="LOC107957654"
                     /coded_by="XM_016893201.2:174..1316"
                     /db_xref="GeneID:107957654"
ORIGIN      
        1 mscsiavsns pvfspssplf cqshdalnlt lthlippssy ppspspsspf mlrlqkpptg
       61 sllssssvst sptacmgagt vetilkrkrp akldipvakt ttsfgapktp cevrrevese
      121 gdgfsvycer grkkamedrf sasvelqgns kqaffgvfdg hggakaaefa aqklrrnild
      181 evdrkrdktm ikeavkqgyl ktdaeflkqd vaggtccvta liqngnlivs nagdcravls
      241 ragvaeplts dhrpsredek drietwggyv dlchgswriq gclavsrgig dkhlkqwvia
      301 epetniinie sdceflilas dglwdkvsnq eavdiarpkc lainktidpl vackklvqls
      361 vsrgssddis vmliqlrnyi
//
LOCUS       XP_016748691             480 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase kinase 18 [Gossypium
            hirsutum].
ACCESSION   XP_016748691
VERSION     XP_016748691.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893202.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748691.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="mitogen-activated protein kinase kinase kinase
                     18"
                     /calculated_mol_wt=53739
     Region          11..279
                     /region_name="STKc_MAPKKK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Mitogen-Activated Protein Kinase Kinase Kinase; cd06606"
                     /db_xref="CDD:270783"
     Site            order(18..22,26,39,41,72,94..97,100..101,104,143,145..148,
                     150,161..162,165,181,185..187,189,216,225)
                     /site_type="active"
                     /db_xref="CDD:270783"
     Site            order(18..22,26,39,41,72,94..97,99..101,104,147..148,150,
                     161..163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270783"
     Site            order(21..22,143,145..147,165,181,185..187,189,216,225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270783"
     Site            order(161..170,181,185..189)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270783"
     CDS             1..480
                     /gene="LOC107957655"
                     /coded_by="XM_016893202.2:178..1620"
                     /db_xref="GeneID:107957655"
ORIGIN      
        1 mgkqsntqki swtkgkclgk gsfgtvslai neidgsvfav kcvdlatclp nqleslenei
       61 rilrsfsspf vveylgddvt syeflttsyr nlhmeylqgg tvvdfrafkr rladvderil
      121 rwqtrclvsa lkyvhgegiv hcdvkgknal vgsdsatvkl adfgsaveik resagnrcms
      181 litprgsplw mapevirgey qgpesdvwsl gctviemvtg kppwedqgfn slsriansde
      241 lpelptqlse lgkdfvekcl rrdrnqrwsc dqllqhpfla sasppnrtkg ssprcvldfa
      301 nsdfeedent envedsarer icklatvrgv iwesdgwmav rslsfpress lnceegtnte
      361 ylesmrtgle fpgcldgsns vewqcgnsed vrglkssstr lwcdcsagrs cgyssenvel
      421 avdkgefrfy rycnlllqlf lsnlrifryi lylifvlitt llqlflsnli npnlsqstea
//
LOCUS       XP_016748692             216 aa            linear   PLN 06-AUG-2024
DEFINITION  ran-binding protein 1 homolog a [Gossypium hirsutum].
ACCESSION   XP_016748692
VERSION     XP_016748692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="ran-binding protein 1 homolog a"
                     /calculated_mol_wt=23939
     Region          25..158
                     /region_name="RanBD_RanBP1"
                     /note="Ran-binding domain; cd13179"
                     /db_xref="CDD:270000"
     Site            order(36..37,39..42,55,57,59,66..69,86,88,90..91,93..97,
                     100..102,110..113,120,122,126,129,131,135,139)
                     /site_type="other"
                     /note="Ran#RanBP1#RanGAP complex [polypeptide binding]"
                     /db_xref="CDD:270000"
     Site            order(36..37,40..42,51,57,59,64..69,73,84,86,88,90..97,
                     100..102,110..113,116..118,120,122,126,133,135,137,139)
                     /site_type="other"
                     /note="CRM1-RanBP1-RanGTP complex [polypeptide binding]"
                     /db_xref="CDD:270000"
     CDS             1..216
                     /gene="LOC107957656"
                     /coded_by="XM_016893203.2:762..1412"
                     /db_xref="GeneID:107957656"
ORIGIN      
        1 maskepdqeh rededaapae eedtgaqiap iikleevavs tgeenedpil dlksklyrfd
       61 kegnqwkerg agtvkllkhk etgkvrlvmr qsktlkican hlvlptmtvq ehagndkscl
      121 whasdyadge lkddlfcirf asvkncktfm qkfqevaesq kpkeenkdas aaagllekls
      181 vdekktedka geekketeat ekadsekkdg eaasst
//
LOCUS       XP_016748693             563 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NETWORKED 4A [Gossypium hirsutum].
ACCESSION   XP_016748693
VERSION     XP_016748693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893204.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..563
                     /product="protein NETWORKED 4A"
                     /calculated_mol_wt=65292
     Region          9..66
                     /region_name="KIP1"
                     /note="KIP1-like protein; pfam07765"
                     /db_xref="CDD:429647"
     Region          <270..513
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..563
                     /gene="LOC107957658"
                     /coded_by="XM_016893204.2:251..1942"
                     /db_xref="GeneID:107957658"
ORIGIN      
        1 mpkkkitkkw lsaemdrrvk qmlnlidqda dsfakkaemy yqkrpelvah veefyrlyrt
       61 lverndylkg elrrnvqldv qsqgsgvsdn gfelpptfps peqrltrrrs gtraagfeff
      121 lgsswsdmyq kgddessyvt dsepdsddgs vnnytvsstm nlgdqgagrk tieleielre
      181 mkeklqiled esellarirk yeeelkivnr klrlseeknn wltielqkyk qmetsesdss
      241 eedsvktdts mvqnkvdkei lhddgkilpl edefnmtkem lrdpeteiac lklenkqafe
      301 kiqslqgqld maqseirtsn tklsilkkev cklqgrmaml kdglvsrdne irelkmvvsd
      361 aemkifneka qigaevskll eersyleeql rdgesharsl eeeirnvlne kreleerlhd
      421 eiealkteit krgdsikiln ekletlkser delkmkidll eeavgykgdq ivemdeqlhr
      481 lrvehgelia saeganklve emqgkakele deierqsrai eeaaeekrea irqlcfsleh
      541 yrdgyyklkq aftgnkrvpi lat
//
LOCUS       XP_040941920             108 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941920
VERSION     XP_040941920.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085986.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..108
                     /product="endo-1,4-beta-xylanase 5 isoform X1"
                     /calculated_mol_wt=12295
     CDS             1..108
                     /gene="LOC107957659"
                     /coded_by="XM_041085986.1:794..1120"
                     /db_xref="GeneID:107957659"
ORIGIN      
        1 mlslifaskn pffsnvldmq nsddrdidit igssslqpft dqewrfnqqf mintqrkrav
       61 tihvsdqqgn rlqgalitin qvskdfpfgf aiahtilgnl pyqnwfve
//
LOCUS       XP_040941921              96 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941921
VERSION     XP_040941921.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085987.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="endo-1,4-beta-xylanase 5 isoform X2"
                     /calculated_mol_wt=10868
     CDS             1..96
                     /gene="LOC107957659"
                     /coded_by="XM_041085987.1:650..940"
                     /db_xref="GeneID:107957659"
ORIGIN      
        1 mvaghfskns ddrdiditig ssslqpftdq ewrfnqqfmi ntqrkravti hvsdqqgnrl
       61 qgalitinqv skdfpfgfai ahtilgnlpy qnwfve
//
LOCUS       XP_040941922              96 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941922
VERSION     XP_040941922.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085988.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="endo-1,4-beta-xylanase 5 isoform X2"
                     /calculated_mol_wt=10868
     CDS             1..96
                     /gene="LOC107957659"
                     /coded_by="XM_041085988.1:560..850"
                     /db_xref="GeneID:107957659"
ORIGIN      
        1 mvaghfskns ddrdiditig ssslqpftdq ewrfnqqfmi ntqrkravti hvsdqqgnrl
       61 qgalitinqv skdfpfgfai ahtilgnlpy qnwfve
//
LOCUS       XP_040941923              96 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941923
VERSION     XP_040941923.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085989.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="endo-1,4-beta-xylanase 5 isoform X2"
                     /calculated_mol_wt=10868
     CDS             1..96
                     /gene="LOC107957659"
                     /coded_by="XM_041085989.1:619..909"
                     /db_xref="GeneID:107957659"
ORIGIN      
        1 mvaghfskns ddrdiditig ssslqpftdq ewrfnqqfmi ntqrkravti hvsdqqgnrl
       61 qgalitinqv skdfpfgfai ahtilgnlpy qnwfve
//
LOCUS       XP_016752923             383 aa            linear   PLN 06-AUG-2024
DEFINITION  probable N-acetyltransferase HLS1 [Gossypium hirsutum].
ACCESSION   XP_016752923
VERSION     XP_016752923.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897434.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016752923.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..383
                     /product="probable N-acetyltransferase HLS1"
                     /calculated_mol_wt=43162
     Region          25..149
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(97..99,109..110)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..383
                     /gene="LOC107961245"
                     /coded_by="XM_016897434.2:54..1205"
                     /db_xref="GeneID:107961245"
ORIGIN      
        1 mgygsgelii rsynaqndrv rleglesice vgpadkpflf tdtlgdpicr iknspiynml
       61 vaelagqlvg viqgtiklvt lhkppknvak vgyilglrva payrrqgigs rlvtkleewf
      121 vacnvdytym atekdneasy klfvnklgyv kfrtpailvn pvnhhrssqi ssnfkltklk
      181 ikeaeslyrk ylssteffpi dignilrnkl slgtwvaypk geiwgkvpts wamlsvwnsg
      241 elfklrlgnv piscfmytks sqliqkflpc fklpsipdff npfgfyfiyg vygegplygk
      301 lvkslcnfvh nmasskskdc kvivteiggn dtrsklhiph rksmscsedl wcikslkned
      361 gkrvhklttm pptrtlfvdp rev
//
LOCUS       XP_016748696             306 aa            linear   PLN 06-AUG-2024
DEFINITION  probable phytol kinase 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016748696
VERSION     XP_016748696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893207.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..306
                     /product="probable phytol kinase 3, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=33110
     Region          108..305
                     /region_name="SEC59"
                     /note="Dolichol kinase [Posttranslational modification,
                     protein turnover, chaperones, Cell wall/membrane/envelope
                     biogenesis]; COG0170"
                     /db_xref="CDD:439940"
     CDS             1..306
                     /gene="LOC107957660"
                     /coded_by="XM_016893207.2:215..1135"
                     /db_xref="GeneID:107957660"
ORIGIN      
        1 maaaavslfs aksitaipkl kpflfdfhvs ppfslsfava antttnftlw srkprrnpta
       61 paaamlfpqn pvfsdtcaai isgsialsvl rlwqetakrg lfdqklnrkl vhisiglvfm
      121 lcwplyssgy rgailaaitp gvnimrmili gsglwkdeat vksmsrcgdy rellkgplyy
      181 attitlacaf ywrtspiaia aicnlcagdg fadivgrqfg gqklpynknk siagsvamai
      241 agfftsvgym yyfsyfgyik esteivfgfl ivslasalve slpvsteldd nltvtltsil
      301 vgslvf
//
LOCUS       XP_040941925             255 aa            linear   PLN 06-AUG-2024
DEFINITION  probable phytol kinase 3, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941925
VERSION     XP_040941925.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085991.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..255
                     /product="probable phytol kinase 3, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=27767
     Region          108..>234
                     /region_name="SEC59"
                     /note="Dolichol kinase [Posttranslational modification,
                     protein turnover, chaperones, Cell wall/membrane/envelope
                     biogenesis]; COG0170"
                     /db_xref="CDD:439940"
     CDS             1..255
                     /gene="LOC107957660"
                     /coded_by="XM_041085991.1:186..953"
                     /db_xref="GeneID:107957660"
ORIGIN      
        1 maaaavslfs aksitaipkl kpflfdfhvs ppfslsfava antttnftlw srkprrnpta
       61 paaamlfpqn pvfsdtcaai isgsialsvl rlwqetakrg lfdqklnrkl vhisiglvfm
      121 lcwplyssgy rgailaaitp gvnimrmili gsglwkdeat vksmsrcgdy rellkgplyy
      181 attitlacaf ywrtspiaia aicnlcagdg fadivgrqfg gqklpynknk siagiciifp
      241 tldiskrvrr lfsvs
//
LOCUS       XP_016748697             179 aa            linear   PLN 06-AUG-2024
DEFINITION  SAGA-associated factor 11 [Gossypium hirsutum].
ACCESSION   XP_016748697
VERSION     XP_016748697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..179
                     /product="SAGA-associated factor 11"
                     /calculated_mol_wt=19572
     Region          87..119
                     /region_name="Sgf11"
                     /note="Sgf11 (transcriptional regulation protein);
                     pfam08209"
                     /db_xref="CDD:369754"
     CDS             1..179
                     /gene="LOC107957661"
                     /coded_by="XM_016893208.2:571..1110"
                     /db_xref="GeneID:107957661"
ORIGIN      
        1 msgpnedknt qlsshffgdl ldsiivdvas echriaklgl drnleeeeee mrlsvqarar
       61 vadpsnsset ntkyvvdifg qthpsiatei fecmncgrsi aagrfaphle kcmgkgrkar
      121 lkvtrsstaa qnrysrgspv sayspysnst stnrlsngtp svageeysng tyeepwnkt
//
LOCUS       XP_016748698            1018 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-activating enzyme E1 1 [Gossypium hirsutum].
ACCESSION   XP_016748698
VERSION     XP_016748698.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748698.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1018
                     /product="ubiquitin-activating enzyme E1 1"
                     /calculated_mol_wt=113577
     Region          10..1016
                     /region_name="Ube1"
                     /note="ubiquitin-activating enzyme E1; TIGR01408"
                     /db_xref="CDD:273603"
     CDS             1..1018
                     /gene="LOC107957662"
                     /coded_by="XM_016893209.2:451..3507"
                     /db_xref="GeneID:107957662"
ORIGIN      
        1 malgganyte idedlhsrql avygretmrr lfasnilisg mqglgaeiak nlilagvksv
       61 tlhdegvvev wdlssnfvfs etdvgknrav asvqklqeln naviistltt kltkeqlsnf
      121 qavvftdisf ekaiefddyc hnynppisfi kaevrglfgs ifcdfgpeft vvdvdgedph
      181 tgiiasisnd ypafvscvdd erlefqdgdl vvfsevhgmt elndgkprki kmarpysftl
      241 eedttkfgty ikggivtqvk qpkvlnfkpl realkdpgef llsdfskfdr ppllhiafqa
      301 ldkfvsdlgr fpvagseeda nklisiagni nervgdgkve dinpkllrnf afgaravlnp
      361 maamfggivg qevvkacsgk fhplfqffyf dsveslptep ldpsdlkpln trydaqisvf
      421 gsklqkkled akvfivgsga lgceflknia lmgvscgdqg kltvtdddvi eksnlsrqfl
      481 frdwnigqak stvaasaaas insrlnieal qnrvgpeten vfddtfwenl tviinaldnv
      541 narlyidqrc lyfqkplles gtlgakcntq mviphlteny gasrdppekq apmctvhsfp
      601 hnidhcltwa rsefegllek tpaevnayls npveyktaqr nagdaqardn lervleclek
      661 ekcetfqdci awarlrfedy fvnrvkqliy tfpedaatst gapfwsapkr fpqplqfsvv
      721 dpshlqfvma asilraetfg ipipdwiehp kmlaeaiekl ivpdfepkkd vkivtdekan
      781 tlsvasidda avidelifkl elctknlplg fkmkpiqfek dddtnyhmdl iaglanmrar
      841 nysipevdkl kakfiagrii paiatstama tglvclelyk aldgghkled yrntfanlal
      901 plfsmaepvp pktikhsdms wtvwdrwilk gnpslreliq wlkdkglnay sisygsclly
      961 nsmflrhrer mdkkmvdlal evakaelgpn gkhldvvvac eddedndidi pqisiyfa
//
LOCUS       XP_040941926             920 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-overproduction protein 1 [Gossypium hirsutum].
ACCESSION   XP_040941926
VERSION     XP_040941926.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085992.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..920
                     /product="ethylene-overproduction protein 1"
                     /calculated_mol_wt=104109
     Region          217..299
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          417..>580
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          657..>807
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          746..>920
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(746,749..750,753..754,756,778,781..782,785..786,
                     788..789,842,845..846,849..850,853)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          746..773
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          776..836
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          841..869
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..920
                     /gene="LOC107957663"
                     /coded_by="XM_041085992.1:512..3274"
                     /db_xref="GeneID:107957663"
ORIGIN      
        1 mlglkklier fkgtqvhaln ppgsngvntt gssstpgncr vkfkgskqks skacsgsgae
       61 tlipfgfprt dhlepsieph lkpiqlietl adlfrrseac leseksliyi eqysilsslg
      121 dpkllrrclr aarqhaldvh skvvlsawlr yerredeleg vspmdcssrf ilecpkatlv
      181 ygydpnsiyd nckcyqecaq stdshiskvk tleedsdvsf cvgneeidci rfkiaalsrp
      241 lkamlygsfk esksckidfs htgisvegmr avdlysrtrr vdlfhpevvl ellsfanrfc
      301 ceemksdcdi hlaslvscie dalilieygl eeranflvas clqlllrelp tslynpkvmk
      361 mfcsfeaker lasaghasfi lyyflsqvsm evntvsnvtv mllerlreca aqkwqkalal
      421 hqlgcvller qeytsaqccf eaaaeashvy slagnarcrf kqgqrysayk lmslviseyk
      481 avgwmyqers lynvgkdkid dlntateldp tlvfpykyra vlkaeekqtt aaileidrii
      541 gfklepdcle lrawffiaie dygsalrdvq alftldpnyr mfdehvsgdn lieflslkve
      601 qgsqadcwmq lydrwscldd igslavihqm lvndpgksll rfrqfllllr lncqkaamrc
      661 lrlarnlsss ehkklvyegw ilhdtghree aiaradesis iqrsfeaffl kayiladtsl
      721 gpessyviql leeaircpsd glrkgqalnn lgsiyvdcgk ldeatncymn aleikhtrah
      781 qglarihflr nkrkaaydem sklidkacsn asiyekrsey cdgsmakndl nmatrldplr
      841 typyryraav lmdeqkdsea ikevskaiaf kpdlqmlhlr aafyesigdl ksavcdceaa
      901 iclepnhidt ldlynkargk
//
LOCUS       XP_016748699             955 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein catalytic subunit isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016748699
VERSION     XP_016748699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..955
                     /product="rab3 GTPase-activating protein catalytic subunit
                     isoform X1"
                     /calculated_mol_wt=107871
     Region          576..729
                     /region_name="Rab3-GTPase_cat"
                     /note="Rab3 GTPase-activating protein catalytic subunit;
                     pfam13890"
                     /db_xref="CDD:464022"
     CDS             1..955
                     /gene="LOC107957665"
                     /coded_by="XM_016893210.2:214..3081"
                     /db_xref="GeneID:107957665"
ORIGIN      
        1 mastskanlt eddeeeeeie hfddftlass werfiseiea tcrqwsadgp knllekgavh
       61 ldysnkiyri kselkdatki ysmeyyfgid ndgnisdwnc tlhdlqlcfg vkeflvispq
      121 sasgvvldap esskllsava ialsncsclw pafvpvhdps rkafigiqnm gtiftrrfea
      181 drigsqvpvk fmhleglyel fvskfaywts dhlthlfkvy lmmkltyrtl pnddendgiq
      241 dadaenaese kmpdggnlnr khwdddcpws ewysaedpvk aagtglmdtm hvgfdlvttw
      301 sekviessle maemenasph eaekwiltpn lspnldsskg drigfasqlq llvsaldmsf
      361 eaqfmedfvs venlgsdnlk ssmvippptv ldrvlkdlll egrqfpdfak gehkssraik
      421 gapleslfaq fclhslwfgn csiraiavlw vefvreirwy weesqplpkm pahgsidlat
      481 clinqklqml aiciekkrel neefqdclgs nddvfvhmee diqvgeests fltqsqdfdg
      541 krdsplileg fnesktsisk fstnsqdays adkstsdskr tgsagpvgsm kllnscqslh
      601 apftqnaplm tedmheerlr aveafgdsfn fsaqleretl ssdmsafkaa npdavfedfi
      661 rwhspgdwen dgskandkwp prgklsqrms gpgnswrkiw ndapslpaye qkplldpnre
      721 gekilhylet vrphqlleqm vctafrasad tlhqtnfgsl kqittkmdql fhtmastlrp
      781 lqanllsgns ekiedlkrlc valehvekll tlaaslrhkf iqaprvyeai fsdyydfylp
      841 nmgkgsadvd iqkefdlklq lrvnerqvvs nmftpptanq swrkvlsmgn llnghepilr
      901 qivfskrdsg sdchyavstr ggphmddqqe ietyrmyvcg tsndlrvalc vtsyd
//
LOCUS       XP_016748700             954 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein catalytic subunit isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016748700
VERSION     XP_016748700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..954
                     /product="rab3 GTPase-activating protein catalytic subunit
                     isoform X2"
                     /calculated_mol_wt=107742
     Region          575..728
                     /region_name="Rab3-GTPase_cat"
                     /note="Rab3 GTPase-activating protein catalytic subunit;
                     pfam13890"
                     /db_xref="CDD:464022"
     CDS             1..954
                     /gene="LOC107957665"
                     /coded_by="XM_016893211.2:198..3062"
                     /db_xref="GeneID:107957665"
ORIGIN      
        1 mastskanlt eddeeeeieh fddftlassw erfiseieat crqwsadgpk nllekgavhl
       61 dysnkiyrik selkdatkiy smeyyfgidn dgnisdwnct lhdlqlcfgv keflvispqs
      121 asgvvldape sskllsavai alsncsclwp afvpvhdpsr kafigiqnmg tiftrrfead
      181 rigsqvpvkf mhleglyelf vskfaywtsd hlthlfkvyl mmkltyrtlp nddendgiqd
      241 adaenaesek mpdggnlnrk hwdddcpwse wysaedpvka agtglmdtmh vgfdlvttws
      301 ekviesslem aemenasphe aekwiltpnl spnldsskgd rigfasqlql lvsaldmsfe
      361 aqfmedfvsv enlgsdnlks smvippptvl drvlkdllle grqfpdfakg ehkssraikg
      421 apleslfaqf clhslwfgnc siraiavlwv efvreirwyw eesqplpkmp ahgsidlatc
      481 linqklqmla iciekkreln eefqdclgsn ddvfvhmeed iqvgeestsf ltqsqdfdgk
      541 rdsplilegf nesktsiskf stnsqdaysa dkstsdskrt gsagpvgsmk llnscqslha
      601 pftqnaplmt edmheerlra veafgdsfnf saqleretls sdmsafkaan pdavfedfir
      661 whspgdwend gskandkwpp rgklsqrmsg pgnswrkiwn dapslpayeq kplldpnreg
      721 ekilhyletv rphqlleqmv ctafrasadt lhqtnfgslk qittkmdqlf htmastlrpl
      781 qanllsgnse kiedlkrlcv alehvekllt laaslrhkfi qaprvyeaif sdyydfylpn
      841 mgkgsadvdi qkefdlklql rvnerqvvsn mftpptanqs wrkvlsmgnl lnghepilrq
      901 ivfskrdsgs dchyavstrg gphmddqqei etyrmyvcgt sndlrvalcv tsyd
//
LOCUS       XP_016748701             953 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein catalytic subunit isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016748701
VERSION     XP_016748701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..953
                     /product="rab3 GTPase-activating protein catalytic subunit
                     isoform X3"
                     /calculated_mol_wt=107669
     Region          574..727
                     /region_name="Rab3-GTPase_cat"
                     /note="Rab3 GTPase-activating protein catalytic subunit;
                     pfam13890"
                     /db_xref="CDD:464022"
     CDS             1..953
                     /gene="LOC107957665"
                     /coded_by="XM_016893212.2:214..3075"
                     /db_xref="GeneID:107957665"
ORIGIN      
        1 mastskanlt eddeeeeeie hfddftlass werfiseiea tcrqwsadgp knllekgavh
       61 ldysnkiyri kselkdatki ysmeyyfgid ndgnisdwnc tlhdlqlcfg vkeflvispq
      121 sasgvvldap esskllsava ialsncsclw pafvpvhdps rkafigiqnm gtiftrrfea
      181 drigsqvpvk fmhleglyel fvskfaywts dhlthlfkvy lmmkltyrtl pnddendgiq
      241 dadaenaese kmpdggnlnr khwdddcpws ewysaedpvk aagtglmdtm hvgfdlvttw
      301 sekviessle maemenasph eaekwiltpn lspnlskgdr igfasqlqll vsaldmsfea
      361 qfmedfvsve nlgsdnlkss mvippptvld rvlkdllleg rqfpdfakge hkssraikga
      421 pleslfaqfc lhslwfgncs iraiavlwve fvreirwywe esqplpkmpa hgsidlatcl
      481 inqklqmlai ciekkrelne efqdclgsnd dvfvhmeedi qvgeestsfl tqsqdfdgkr
      541 dsplilegfn esktsiskfs tnsqdaysad kstsdskrtg sagpvgsmkl lnscqslhap
      601 ftqnaplmte dmheerlrav eafgdsfnfs aqleretlss dmsafkaanp davfedfirw
      661 hspgdwendg skandkwppr gklsqrmsgp gnswrkiwnd apslpayeqk plldpnrege
      721 kilhyletvr phqlleqmvc tafrasadtl hqtnfgslkq ittkmdqlfh tmastlrplq
      781 anllsgnsek iedlkrlcva lehveklltl aaslrhkfiq aprvyeaifs dyydfylpnm
      841 gkgsadvdiq kefdlklqlr vnerqvvsnm ftpptanqsw rkvlsmgnll nghepilrqi
      901 vfskrdsgsd chyavstrgg phmddqqeie tyrmyvcgts ndlrvalcvt syd
//
LOCUS       XP_016748702             943 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein catalytic subunit isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_016748702
VERSION     XP_016748702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..943
                     /product="rab3 GTPase-activating protein catalytic subunit
                     isoform X4"
                     /calculated_mol_wt=106686
     Region          564..717
                     /region_name="Rab3-GTPase_cat"
                     /note="Rab3 GTPase-activating protein catalytic subunit;
                     pfam13890"
                     /db_xref="CDD:464022"
     CDS             1..943
                     /gene="LOC107957665"
                     /coded_by="XM_016893213.2:214..3045"
                     /db_xref="GeneID:107957665"
ORIGIN      
        1 mastskanlt eddeeeeeie hfddftlass werfiseiea tcrqwsadgp knllekgavh
       61 ldysnkiyri kselkdatki ysmeyyfgid ndgnisdwnc tlhdlqlcfg vkeflvispq
      121 sasgvvldap esskllsava ialsncsclw pafvpvhdps rkafigiqnm gtiftrrfea
      181 drigsqvpvk fmhleglyel fvskfaywts dhlthlfkvy lmmkltyrtl pnddendgiq
      241 dadaenaese kmpdggnlnr khwdddcpws ewysaedpvk gfdlvttwse kviesslema
      301 emenasphea ekwiltpnls pnldsskgdr igfasqlqll vsaldmsfea qfmedfvsve
      361 nlgsdnlkss mvippptvld rvlkdllleg rqfpdfakge hkssraikga pleslfaqfc
      421 lhslwfgncs iraiavlwve fvreirwywe esqplpkmpa hgsidlatcl inqklqmlai
      481 ciekkrelne efqdclgsnd dvfvhmeedi qvgeestsfl tqsqdfdgkr dsplilegfn
      541 esktsiskfs tnsqdaysad kstsdskrtg sagpvgsmkl lnscqslhap ftqnaplmte
      601 dmheerlrav eafgdsfnfs aqleretlss dmsafkaanp davfedfirw hspgdwendg
      661 skandkwppr gklsqrmsgp gnswrkiwnd apslpayeqk plldpnrege kilhyletvr
      721 phqlleqmvc tafrasadtl hqtnfgslkq ittkmdqlfh tmastlrplq anllsgnsek
      781 iedlkrlcva lehveklltl aaslrhkfiq aprvyeaifs dyydfylpnm gkgsadvdiq
      841 kefdlklqlr vnerqvvsnm ftpptanqsw rkvlsmgnll nghepilrqi vfskrdsgsd
      901 chyavstrgg phmddqqeie tyrmyvcgts ndlrvalcvt syd
//
LOCUS       XP_040941927             941 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein catalytic subunit isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_040941927
VERSION     XP_040941927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085993.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..941
                     /product="rab3 GTPase-activating protein catalytic subunit
                     isoform X5"
                     /calculated_mol_wt=106483
     Region          562..715
                     /region_name="Rab3-GTPase_cat"
                     /note="Rab3 GTPase-activating protein catalytic subunit;
                     pfam13890"
                     /db_xref="CDD:464022"
     CDS             1..941
                     /gene="LOC107957665"
                     /coded_by="XM_041085993.1:214..3039"
                     /db_xref="GeneID:107957665"
ORIGIN      
        1 mastskanlt eddeeeeeie hfddftlass werfiseiea tcrqwsadgp knllekgavh
       61 ldysnkiyri kselkdatki ysmeyyfgid ndgnisdwnc tlhdlqlcfg vkeflvispq
      121 sasgvvldap esskllsava ialsncsclw pafvpvhdps rkafigiqnm gtiftrrfea
      181 drigsqvpvk fmhleglyel fvskfaywts dhlthlfkvy lmmkltyrtl pnddendgiq
      241 dadaenaese kmpdggnlnr khwdddcpws ewysaedpvk gfdlvttwse kviesslema
      301 emenasphea ekwiltpnls pnlskgdrig fasqlqllvs aldmsfeaqf medfvsvenl
      361 gsdnlkssmv ippptvldrv lkdlllegrq fpdfakgehk ssraikgapl eslfaqfclh
      421 slwfgncsir aiavlwvefv reirwywees qplpkmpahg sidlatclin qklqmlaici
      481 ekkrelneef qdclgsnddv fvhmeediqv geestsfltq sqdfdgkrds plilegfnes
      541 ktsiskfstn sqdaysadks tsdskrtgsa gpvgsmklln scqslhapft qnaplmtedm
      601 heerlravea fgdsfnfsaq leretlssdm safkaanpda vfedfirwhs pgdwendgsk
      661 andkwpprgk lsqrmsgpgn swrkiwndap slpayeqkpl ldpnregeki lhyletvrph
      721 qlleqmvcta frasadtlhq tnfgslkqit tkmdqlfhtm astlrplqan llsgnsekie
      781 dlkrlcvale hveklltlaa slrhkfiqap rvyeaifsdy ydfylpnmgk gsadvdiqke
      841 fdlklqlrvn erqvvsnmft pptanqswrk vlsmgnllng hepilrqivf skrdsgsdch
      901 yavstrggph mddqqeiety rmyvcgtsnd lrvalcvtsy d
//
LOCUS       XP_016748703             652 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock 70 kDa protein [Gossypium hirsutum].
ACCESSION   XP_016748703
VERSION     XP_016748703.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..652
                     /product="heat shock 70 kDa protein"
                     /calculated_mol_wt=71253
     Region          5..652
                     /region_name="PTZ00009"
                     /note="heat shock 70 kDa protein; Provisional"
                     /db_xref="CDD:240227"
     CDS             1..652
                     /gene="LOC107957666"
                     /coded_by="XM_016893214.2:302..2260"
                     /db_xref="GeneID:107957666"
ORIGIN      
        1 maakaegkai gidlgttysc vgvwqndrve iiandqgnrt tpsyvaftdt erligdaakn
       61 qvamnpqntv fdakrligrr fsdpavqadm khwpfkvvag pgdkpmivvn ykgeekqfap
      121 eeissmvlvk mkevaeaymg qtvknavitv payfndsqrq atkdagsisg lnilriinep
      181 taaaiaygld kkasrsgekn vlifdlgggt fdvslltiee gifevkatag dthlggedfd
      241 nrlvnhfvqe fkrkhkkdis tnaralrrlr tacerakrtl sstaqttiei dslyegidfy
      301 stitrarfee lnmdlfrkcm epvekclrds kidksqvdev vlvggstrip kvqqllqdff
      361 ngkelcksin pdeavaygaa vqaailsgeg nekvqdllll dvtplslgle taggvmtvli
      421 prnttiptkk eqifstysdn qpgvliqvye gerartkdnn llgkfeltgi ppaprgvpqi
      481 nvcfdidang ilnvsaedkt agvknkitit ndkgrlskee iermvqeaer ykaedeevkk
      541 kveaknglen yaynmrntvk ddkfagkldp aekqkiekai ddtiewldgn qlaevdefed
      601 klkelegicn piiakmyqgg aggdvpmggg aempngggsg gsgagpkiee vd
//
LOCUS       XP_016752924             218 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Gossypium hirsutum].
ACCESSION   XP_016752924
VERSION     XP_016752924.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897435.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016752924.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..218
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6"
                     /calculated_mol_wt=22900
     Region          36..157
                     /region_name="ALOG_dom"
                     /note="ALOG domain; pfam04852"
                     /db_xref="CDD:398493"
     CDS             1..218
                     /gene="LOC107961246"
                     /coded_by="XM_016897435.2:237..893"
                     /db_xref="GeneID:107961246"
ORIGIN      
        1 mdsgsranpn sinegsssat apvpmdsqqg gagelssspa hppsryesqk rrdwntflqy
       61 lknhkppltl srcsgahvie flkyldqfgk tkvhvtacpy fghanppdpc scplkqawgs
      121 ldaligrlra ayeenggrpe snpfgtravr iylrevrggq akargipyek kkrkrpstta
      181 vsaasgtqpp ggaagdgscg gttandgtvt aaattnsv
//
LOCUS       XP_016748704             484 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase 9 [Gossypium hirsutum].
ACCESSION   XP_016748704
VERSION     XP_016748704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893215.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="glucan endo-1,3-beta-glucosidase 9"
                     /calculated_mol_wt=53204
     Region          23..346
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          365..447
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..484
                     /gene="LOC107957668"
                     /coded_by="XM_016893215.2:96..1550"
                     /db_xref="GeneID:107957668"
ORIGIN      
        1 mypfpvflfl tilcllgsta daigvnwgtm sshplpppkv vellksnevs kvklfdadpl
       61 vlqalsgsni vvtlgipnsm lktlnssrka aeswvhdnvt ryfshggagv rieyvavgde
      121 pflqsygdqf hpfvigaamn iqaaltkanl agevkvvvpc sfdtfvsesg rpskghfrtd
      181 lnktmiellt flskhhssff vtispfisfq qnknisldfs lfkenahhhn dslrtyknsf
      241 dlsydtlvsa lskigfpeid ivvarigwpt dgaanatssi aetfmkglid hlhsktgtpl
      301 rprnppietf ifslldedhr sitsgnferh wgvftfdgqa kyhfnfgqgt knlvnsqfve
      361 ylapkwcvvn nnkdlsnasa saldacstsd ctalspggsc sniswpgnis yafnsyyqqn
      421 dqradscdfg glglittvdp svdtcrffve lqtsystsah eayifpriil llaclfscll
      481 gfkw
//
LOCUS       XP_016748705             460 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 87A1 [Gossypium hirsutum].
ACCESSION   XP_016748705
VERSION     XP_016748705.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893216.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748705.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..460
                     /product="UDP-glycosyltransferase 87A1"
                     /calculated_mol_wt=51599
     Region          6..453
                     /region_name="PLN02448"
                     /note="UDP-glycosyltransferase family protein"
                     /db_xref="CDD:215247"
     Site            order(23..24,26,180,183..184,188,230,278,343,345,347..348,
                     351)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(23,278,343,345,347..348)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            24
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     Site            order(38,111,444..445,448)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340817"
     CDS             1..460
                     /gene="LOC107957669"
                     /coded_by="XM_016893216.2:132..1514"
                     /db_xref="GeneID:107957669"
ORIGIN      
        1 mnlihtrpis gthvvaipyp grghinpmmn lckllasrkh dllitfvite ewlgfirsyt
       61 kpdnihfasi pnvlpselvr gadfpgfyea vmtkmeapfe elldtlelpv taiiadtelk
      121 waicmgnrrn frvaslctts akffsvlhsm vltenwrfli dtldngsela erssgispdi
      181 rmifegstrq vfqlslecis rvpkakyvlf tsvyelegha idtlkarfni piytigpaip
      241 yfelhgnsse tmvqnvpsyl qwldihppcs vlyvslgsfl svsndqmdei aaglqdsgvp
      301 ylwvargets wptekgsemg fvvpwcdqlk vlcyssiggf lthcgwnsil eaiyagipml
      361 tfpilfdqap nskqivddwk igwrlkeeqk dgslvtrasi aelvrsfmdp ennevknmrk
      421 saselkekcr kavaengssq rnldafikdi sqghdvmlie
//
LOCUS       XP_016752925             451 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 87A1 [Gossypium hirsutum].
ACCESSION   XP_016752925
VERSION     XP_016752925.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897436.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..451
                     /product="UDP-glycosyltransferase 87A1"
                     /calculated_mol_wt=50465
     Region          3..449
                     /region_name="PLN02448"
                     /note="UDP-glycosyltransferase family protein"
                     /db_xref="CDD:215247"
     Site            order(23..24,26,167,170..171,175,216,276,341,343,345..346,
                     349)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(23,276,341,343,345..346)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            24
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..451
                     /gene="LOC107961247"
                     /coded_by="XM_016897436.2:208..1563"
                     /db_xref="GeneID:107961247"
ORIGIN      
        1 msstssakra vchivampyp grghinplmn lcnelasksd nilitfvvte ewlsfigser
       61 kagkirfrci pnvvpselvr asdmigflea vwtkmeapfe qllvelelpp tliiadthlf
      121 wavsvgnrrn ipvasfwpms ttmfsvfhhf hlfqekghfp vdlldnenel vdyipgvsst
      181 rlldlpgfng giyplilkri lgcvswagka nylllpsiya lesqtidalk aelslsiytv
      241 gpsipyldls hgdkddclqw ldrqpsnsvl yvsmgsflsv snvqmeeita glqdsgvrfl
      301 lvaregswkl khgcggeglv vpwcdqlrvl chpsiggfws hcgwnsvkeg ifagtpfltf
      361 plfadqnlns klivedwkig wrtkkhqftt rgeisslvkk lmdlesddev kqmrgrakkl
      421 qkeclqaier hgssesnins fihsilqfnd h
//
LOCUS       XP_016748706             452 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 87A1 [Gossypium hirsutum].
ACCESSION   XP_016748706
VERSION     XP_016748706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893217.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..452
                     /product="UDP-glycosyltransferase 87A1"
                     /calculated_mol_wt=50572
     Region          2..450
                     /region_name="PLN02448"
                     /note="UDP-glycosyltransferase family protein"
                     /db_xref="CDD:215247"
     Site            order(23..24,26,165,168..169,173,200,274,339,341,343..344,
                     347)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(23,274,339,341,343..344)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            24
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..452
                     /gene="LOC107957670"
                     /coded_by="XM_016893217.2:91..1449"
                     /db_xref="GeneID:107957670"
ORIGIN      
        1 mdstnvrttr vchvvampfp grghinpmmn lckllasrkk dilitfvvte ewlgyigsdp
       61 kphnilfeti pnvipperlk tanfpgfyna vmtkmeapfe qlldrlelpv taiigdievr
      121 wstgvgtrrn ipvalfwtms asvfsmfhhf dlhikqshak idlieqvesi egmsssnvee
      181 lrtifhrddp rvlelaldci stvpqaqyll ftsanefepq vfdslraiyn fpvypigpai
      241 pylelgegsc etksylqwld sqqtgsvlyi slgsflsvsn tqmdeivggl qisgvrylwv
      301 argeasrlkd rcgdmglvvp wcdqlkvlch psvwgfwmhc gwnstleavf agvpmltfpl
      361 fldqdtnsrq ivedwgngwr vndavkaekl vtkeniaelv rrfmgaesde gkqirrkakl
      421 lqnicvvais eggssaanld gfissispgk dh
//
LOCUS       XP_016748707             411 aa            linear   PLN 06-AUG-2024
DEFINITION  rRNA biogenesis protein rrp36 [Gossypium hirsutum].
ACCESSION   XP_016748707
VERSION     XP_016748707.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893218.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..411
                     /product="rRNA biogenesis protein rrp36"
                     /calculated_mol_wt=45630
     Region          259..>320
                     /region_name="Atg16_CCD"
                     /note="Coiled-coiled domain of autophagy-related 16
                     (Atg16) family proteins; cl46300"
                     /db_xref="CDD:480640"
     CDS             1..411
                     /gene="LOC107957671"
                     /coded_by="XM_016893218.2:613..1848"
                     /db_xref="GeneID:107957671"
ORIGIN      
        1 mayrrrqqqq qqqqgiltss ssssadvdad dlvdvevdaa kairassahk dssfssaygy
       61 gplhsssasp lsapkdsrsh qyesmkslne skqgfwgsla rkaksflddd nnnsnsnnnn
      121 nvqyqfesdg ppksklpqsq rptpemyhnt yqsddrhqkt snptlqkgig aitsslnyig
      181 naveegltiv enrtagiiqe trkhikkkss gsvaqneyak qpqmqqqvrt pvqadqeiql
      241 kasrdvamam aakaklllre lktvradlaf akercaqlee enrvlrenrd rgdnpendel
      301 irlqletlla ekarlahens iyarenrflr evveyhqltm qdvvylddrt eevtevypik
      361 vpslaninsm patsgalpse asldtslkit pnitvcpvpp lefaegsrss s
//
LOCUS       XP_016748708             387 aa            linear   PLN 06-AUG-2024
DEFINITION  shewanella-like protein phosphatase 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016748708
VERSION     XP_016748708.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893219.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..387
                     /product="shewanella-like protein phosphatase 1 isoform
                     X1"
                     /calculated_mol_wt=43096
     Region          58..360
                     /region_name="MPP_Shelphs"
                     /note="Shewanella-like phosphatases, metallophosphatase
                     domain; cd07425"
                     /db_xref="CDD:277368"
     Site            order(62,64,100,104,135..136,240,288,290,327)
                     /site_type="active"
                     /db_xref="CDD:277368"
     Site            order(62,64,100,135,240,327)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277368"
     CDS             1..387
                     /gene="LOC107957672"
                     /coded_by="XM_016893219.2:195..1358"
                     /db_xref="GeneID:107957672"
ORIGIN      
        1 mvslclnslp lpppsscpkk ltetsssfsn gsigtalkpi vvngnpptfv sapgrrivav
       61 gdlhgdldqa ryalemagvl ssdgqdlwtg edavlvqlgd vldrgddeia ilsllrslgi
      121 qakakggavf qvngnhetmn vegdfryves dafdecadfl eylndyeydw deafvrwcgv
      181 sriwkderkm srnhwgpwnl vkrqkgviar svlfrpggpl acelarhava lkvndwifch
      241 ggllphhvay giekmnkevs qwmrglieed tnrnmpfiat kgydsvvwnr lysrdisdla
      301 dyqinqinai lqetlqalga kamvvghtpq fsganceync siwridvgms sgvlnsrpev
      361 leirddkarv irskrnrfse lqmvdyl
//
LOCUS       XP_016748709             385 aa            linear   PLN 06-AUG-2024
DEFINITION  shewanella-like protein phosphatase 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016748709
VERSION     XP_016748709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893220.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..385
                     /product="shewanella-like protein phosphatase 1 isoform
                     X2"
                     /calculated_mol_wt=42869
     Region          58..358
                     /region_name="MPP_Shelphs"
                     /note="Shewanella-like phosphatases, metallophosphatase
                     domain; cd07425"
                     /db_xref="CDD:277368"
     Site            order(62,64,100,104,135..136,238,286,288,325)
                     /site_type="active"
                     /db_xref="CDD:277368"
     Site            order(62,64,100,135,238,325)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277368"
     CDS             1..385
                     /gene="LOC107957672"
                     /coded_by="XM_016893220.2:143..1300"
                     /db_xref="GeneID:107957672"
ORIGIN      
        1 mvslclnslp lpppsscpkk ltetsssfsn gsigtalkpi vvngnpptfv sapgrrivav
       61 gdlhgdldqa ryalemagvl ssdgqdlwtg edavlvqlgd vldrgddeia ilsllrslgi
      121 qakakggavf qvngnhetmn vegdfryves dafdecadfl eylndyeydw deafvrwcgv
      181 sriwkderkm srnhwgpwnl rqkgviarsv lfrpggplac elarhavalk vndwifchgg
      241 llphhvaygi ekmnkevsqw mrglieedtn rnmpfiatkg ydsvvwnrly srdisdlady
      301 qinqinailq etlqalgaka mvvghtpqfs ganceyncsi wridvgmssg vlnsrpevle
      361 irddkarvir skrnrfselq mvdyl
//
LOCUS       XP_040941928             329 aa            linear   PLN 06-AUG-2024
DEFINITION  mitoferrin [Gossypium hirsutum].
ACCESSION   XP_040941928
VERSION     XP_040941928.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085994.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..329
                     /product="mitoferrin"
                     /calculated_mol_wt=35200
     Region          34..128
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          128..220
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          <245..322
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..329
                     /gene="LOC107957675"
                     /coded_by="XM_041085994.1:624..1613"
                     /db_xref="GeneID:107957675"
ORIGIN      
        1 mateatttnf qnsdfrpvpq ppdfhpeviv sphdglhfwq fmiagsvagc vehmamfpvd
       61 tvkthmqalg scpiksvgvr halrsilkse glpglyrgig amglgagpah avyfsvyevc
      121 kkyfsgenpn nsaahavsgv catvasdavf tpmdtvkqrl qlgnsaayrg vfdcvkkvlk
      181 eegfgafyas yrttvlmnap ytavhfttye alkrglieis pesvsdervi vhatagslag
      241 asaavittpl dvvktqlqcq gvcgcdrfks ssigdvvkti vrkdgynglm rgwiprmlfh
      301 apaaaicwst yeaakaffqe inassesgt
//
LOCUS       XP_040941929             220 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L10 [Gossypium hirsutum].
ACCESSION   XP_040941929
VERSION     XP_040941929.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085995.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..220
                     /product="60S ribosomal protein L10"
                     /calculated_mol_wt=24822
     Region          1..211
                     /region_name="PTZ00173"
                     /note="60S ribosomal protein L10; Provisional"
                     /db_xref="CDD:185498"
     Site            order(41,43..44,47,63..64,67,70,74,81,88..90,92,94,98..99,
                     115..119,133,153..154,157..158)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238714"
     Site            56..57
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238714"
     Site            order(68..70,73..74)
                     /site_type="other"
                     /note="putative antibiotic binding site [chemical
                     binding]"
                     /db_xref="CDD:238714"
     Site            order(81,85..86,88,139)
                     /site_type="other"
                     /note="L25 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     Site            order(113..114,117..118)
                     /site_type="other"
                     /note="L27 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     CDS             1..220
                     /gene="LOC107957673"
                     /coded_by="XM_041085995.1:181..843"
                     /db_xref="GeneID:107957673"
ORIGIN      
        1 mgrrparcyr qiknkpypks rycrgvpdpk iriydvgmkk kgvdefpfcv hlvswekenv
       61 ssealeaari acnkymakya gkdafhlrvr vhpfhvlrin kmlscagadr lqtgmrgafg
      121 kpqgtcarva igqvllsvrc kdsnshhaqe alrrakfkfp grqkiivsrk wgftkfsrtd
      181 ylkyksenhi vpdgvnakll gchgplanre pgraflhaav
//
LOCUS       XP_016748711             959 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g06840 [Gossypium hirsutum].
ACCESSION   XP_016748711
VERSION     XP_016748711.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748711.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..959
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g06840"
                     /calculated_mol_wt=105156
     Region          14..899
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          85..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..900
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(634..638,642,654,656,685,701..704,708,710,752,754,
                     756..757,759,770,773,796..799)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(634..638,642,654,656,685,701..704,708,752,754,
                     756..757,759,770)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(638,708,710,752,754,756,773,796..799)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(769..776,788..789,794..799)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..959
                     /gene="LOC107957676"
                     /coded_by="XM_016893222.2:462..3341"
                     /db_xref="GeneID:107957676"
ORIGIN      
        1 mltsgawpwt lgalflmwlf gssllvgaqd githpdevra lqairrtlid pnrnlsnwnr
       61 gdpctsrwtg vfcfngtqdd gylhvrelql lnmnlsgsls pelgrlsrlr ildfmwnsit
      121 gsipkeigni tslellllng nrltgslpee igylpnldri qidenkisge lpksfanlnk
      181 tkhfhmnnns isgqippela rlpylvhfll dnnnlsghlp pelsrmpnlt ilqldnnnfe
      241 gttipdsygn mskllklsir ncnlqgpipd lsripqlgyl dlssnrlngt iptnqlsrni
      301 ttidlannel tgsipasfss lpilqelsla nnslngsips slwqnktlna neslivdlen
      361 naftdisgst dlppnitlwl kgnpvctnns lslpqqcasr ndntrsqsgt nstgscqpqs
      421 cpfpyeyspt snlscfcaap lpvvyrlksp gfsdfvpyin sfteylttgl eldsdqlyig
      481 sfewekgprl kmnlklypvy nasnnsgsmf ngsevqrirg mftgwnipds difgpyelin
      541 fnlpdiyrga vvrtsgsgvs tgaligivlg giavavtlsa vvtllilrvr lrnyrlvskr
      601 rqtlkssiki dgvksftyte latatnnfns stqvgqggyg kvyrgtladg mivaikraqe
      661 gslqgerefl teiqllsrlh hrnlvsligy cdeegeqmlv yefmpngtlr dhlsvkskep
      721 pnfamrlkia lgsakgilyl hteadppifh rdikasnill dsrftakvad fglsrlapvp
      781 dmegavpahv stvvkgtpgy ldpeyflthk ltdksdvysl gvvflelltg mqpishgkni
      841 vrevnvayhs gmifsvidgr mgsypsecve kfvtlalkcs qdetdgrpsm advvreleni
      901 wammpesdvg vsvsidtaae kmtppsssss sslvknpyvs sdvsgsdlvs gvipsitpr
//
LOCUS       XP_040941930             593 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase WNK4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040941930
VERSION     XP_040941930.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085996.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..593
                     /product="probable serine/threonine-protein kinase WNK4
                     isoform X1"
                     /calculated_mol_wt=67276
     Region          23..283
                     /region_name="STKc_WNK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     With No Lysine (WNK) kinase; cd13983"
                     /db_xref="CDD:270885"
     Site            order(31..35,37,39,52,54,87,105..108,112,114,153,155,
                     157..158,160,172,175,190..193)
                     /site_type="active"
                     /db_xref="CDD:270885"
     Site            order(31..35,37,39,52,54,87,105..108,112,153,155,157..158,
                     160,172)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270885"
     Site            order(35,112,114,153,155,157,175,190..193)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270885"
     Site            order(171..180,183,185..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270885"
     CDS             1..593
                     /gene="LOC107957677"
                     /coded_by="XM_041085996.1:451..2232"
                     /db_xref="GeneID:107957677"
ORIGIN      
        1 mmrkkqfdea kdhdyvetdp sgrygrfeem lgkgamktvy kaidevlgme vawnqvklne
       61 vlrspedlqr lysevhllst lsndsiirfh sswidvhrkt fnfitemfts gslreyrkky
      121 krvdiraikn warqilqglv ylhahdppvi hrdlkcdnif vnghlgqvki gdlglaailr
      181 gsksahsvig tpefmapely eedynqlvdv ysfgmcvlem ltseypysec anpaqiykkv
      241 tsgklpgafy qiqdldaqrf igkclvnasn rlsaeqllld pflakdeatr lgspklflnq
      301 seieklhlnd npprtdmtit gklnpeddti flkvqiadte gstrniyfpf divedtpldv
      361 atemvkelei tdwdpleiae midgeisalv pqwkksdlpr hqahntynyq vddddgchhp
      421 fysfsscsss qmsvlmshgc dwlrdddtss qssshsgiys nfsylsgddp npdmspttta
      481 rkhvssrihn strfwhgess rsglsigsnk aleshaacss khtrllmgnr kltrnrslvd
      541 irsqllhrsl veevskrrlf ktvgavedig fqspcevptk rtqrtsgknr iks
//
LOCUS       XP_040941931             564 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase WNK4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941931
VERSION     XP_040941931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085997.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..564
                     /product="probable serine/threonine-protein kinase WNK4
                     isoform X2"
                     /calculated_mol_wt=63728
     Region          2..254
                     /region_name="STKc_WNK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     With No Lysine (WNK) kinase; cd13983"
                     /db_xref="CDD:270885"
     Site            order(2..6,8,10,23,25,58,76..79,83,85,124,126,128..129,
                     131,143,146,161..164)
                     /site_type="active"
                     /db_xref="CDD:270885"
     Site            order(2..6,8,10,23,25,58,76..79,83,124,126,128..129,131,
                     143)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270885"
     Site            order(6,83,85,124,126,128,146,161..164)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270885"
     Site            order(142..151,154,156..164)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270885"
     CDS             1..564
                     /gene="LOC107957677"
                     /coded_by="XM_041085997.1:178..1872"
                     /db_xref="GeneID:107957677"
ORIGIN      
        1 mlgkgamktv ykaidevlgm evawnqvkln evlrspedlq rlysevhlls tlsndsiirf
       61 hsswidvhrk tfnfitemft sgslreyrkk ykrvdiraik nwarqilqgl vylhahdppv
      121 ihrdlkcdni fvnghlgqvk igdlglaail rgsksahsvi gtpefmapel yeedynqlvd
      181 vysfgmcvle mltseypyse canpaqiykk vtsgklpgaf yqiqdldaqr figkclvnas
      241 nrlsaeqlll dpflakdeat rlgspklfln qseieklhln dnpprtdmti tgklnpeddt
      301 iflkvqiadt egstrniyfp fdivedtpld vatemvkele itdwdpleia emidgeisal
      361 vpqwkksdlp rhqahntyny qvddddgchh pfysfsscss sqmsvlmshg cdwlrdddts
      421 sqssshsgiy snfsylsgdd pnpdmspttt arkhvssrih nstrfwhges srsglsigsn
      481 kaleshaacs skhtrllmgn rkltrnrslv dirsqllhrs lveevskrrl fktvgavedi
      541 gfqspcevpt krtqrtsgkn riks
//
LOCUS       XP_016748717             249 aa            linear   PLN 06-AUG-2024
DEFINITION  expansin-A8 [Gossypium hirsutum].
ACCESSION   XP_016748717
VERSION     XP_016748717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..249
                     /product="expansin-A8"
                     /calculated_mol_wt=26797
     Region          23..249
                     /region_name="PLN00050"
                     /note="expansin A; Provisional"
                     /db_xref="CDD:165628"
     CDS             1..249
                     /gene="LOC107957679"
                     /coded_by="XM_016893228.2:332..1081"
                     /db_xref="GeneID:107957679"
ORIGIN      
        1 missamllii lcfslnlhgf agaygswqna hatfyggdda sgtmggacgy gnlysqgygt
       61 knaalstalf nnglscgacy emrcdddpkw clsgtitvta tnfcppnfal sndnggwcnp
      121 plkhfdlaep aflqiaqyra givpvvfrrv acvkkggirf tinghsyfnl vlitnvggag
      181 dvnavsikgf kmrwqsmsrn wgqnwqsnsy lngqslsfqv ttsdgrtvts ynvvpanwqf
      241 gqtfeggqf
//
LOCUS       XP_016748719             314 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor OFP1 [Gossypium hirsutum].
ACCESSION   XP_016748719
VERSION     XP_016748719.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748719.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="transcription repressor OFP1"
                     /calculated_mol_wt=35806
     Region          1..52
                     /region_name="DNA_binding_2"
                     /note="DNA-binding domain; pfam13724"
                     /db_xref="CDD:433432"
     Region          253..309
                     /region_name="Ovate"
                     /note="Transcriptional repressor, ovate; pfam04844"
                     /db_xref="CDD:461454"
     CDS             1..314
                     /gene="LOC107957682"
                     /coded_by="XM_016893230.2:220..1164"
                     /db_xref="GeneID:107957682"
ORIGIN      
        1 mgnyrfrfsd mipnawfykl kdmnktrthh skqkklptsq thhnskprhf tsepfkaarl
       61 hveasgdppr kslkrrdrrr tvykpsprai ssasagfsrh tipilnnsah hyslspfesy
      121 pessdsedde flapppstsy ncqlsssttd iiidmhntsk fdaiselelp piltklpksn
      181 hkadectklm rsssprsspl vnkasgiklr anspkiaskk iqaayarksm spcrylkfrn
      241 rsiaeslavv kssldpqrdf rdsmvemive nnirsskele dllacylsln snqyhdliik
      301 afeqiwfdmt nlrl
//
LOCUS       XP_040941932             518 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 87A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941932
VERSION     XP_040941932.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085998.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..518
                     /product="transmembrane protein 87A isoform X1"
                     /calculated_mol_wt=57882
     Region          176..462
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..518
                     /gene="LOC107957683"
                     /coded_by="XM_041085998.1:164..1720"
                     /db_xref="GeneID:107957683"
ORIGIN      
        1 mdfsfriank sfdflifvil stllttihas ihiyqnqlfn evgnayilpg gseglyasls
       61 sdnpatdgrs firfenitfw rtqdaadeqs emehstgliq avifaaadrn niggsayggq
      121 rsicctpdla klegckqgev iripsatein wpmvfsiqfn gndlstqmnn aevpikktgm
      181 hnlffiacdp klkgtvmsgk tvwknpdgyl pgrmaplmtf yvymaiayll lsaiwfsqym
      241 rfwedilqlq hciaaviglg lfemilwyld ysnfnktgmr pvvttawvvt vgaikktlsr
      301 llilsvsmgy gvvrptlggl tskvlligat yfvaselldi tehvgtindv sgrarlflgl
      361 pdafldafli lwiftslskt leqlqakris vkldiyrkfs nalavavias vawityeiyf
      421 katdpfnerw qsawiitafw dilsfallcv icylwapsqs sqryaysedv geefddeeaq
      481 sltrgqsngd vslvkqeqkn gnaaisdeed eseedkre
//
LOCUS       XP_040941933             468 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 87A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941933
VERSION     XP_040941933.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041085999.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..468
                     /product="transmembrane protein 87A isoform X2"
                     /calculated_mol_wt=51876
     Region          126..412
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..468
                     /gene="LOC107957683"
                     /coded_by="XM_041085999.1:284..1690"
                     /db_xref="GeneID:107957683"
ORIGIN      
        1 mksamltffp aaakdstlls ppttppptaa llfdaadeqs emehstgliq avifaaadrn
       61 niggsayggq rsicctpdla klegckqgev iripsatein wpmvfsiqfn gndlstqmnn
      121 aevpikktgm hnlffiacdp klkgtvmsgk tvwknpdgyl pgrmaplmtf yvymaiayll
      181 lsaiwfsqym rfwedilqlq hciaaviglg lfemilwyld ysnfnktgmr pvvttawvvt
      241 vgaikktlsr llilsvsmgy gvvrptlggl tskvlligat yfvaselldi tehvgtindv
      301 sgrarlflgl pdafldafli lwiftslskt leqlqakris vkldiyrkfs nalavavias
      361 vawityeiyf katdpfnerw qsawiitafw dilsfallcv icylwapsqs sqryaysedv
      421 geefddeeaq sltrgqsngd vslvkqeqkn gnaaisdeed eseedkre
//
LOCUS       XP_040941934             465 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 87A isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941934
VERSION     XP_040941934.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086000.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..465
                     /product="transmembrane protein 87A isoform X3"
                     /calculated_mol_wt=51619
     Region          123..409
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..465
                     /gene="LOC107957683"
                     /coded_by="XM_041086000.1:309..1706"
                     /db_xref="GeneID:107957683"
ORIGIN      
        1 mksamltffp aaakdstlls ppttppptaa llfdeqseme hstgliqavi faaadrnnig
       61 gsayggqrsi cctpdlakle gckqgeviri psateinwpm vfsiqfngnd lstqmnnaev
      121 pikktgmhnl ffiacdpklk gtvmsgktvw knpdgylpgr maplmtfyvy maiaylllsa
      181 iwfsqymrfw edilqlqhci aaviglglfe milwyldysn fnktgmrpvv ttawvvtvga
      241 ikktlsrlli lsvsmgygvv rptlggltsk vlligatyfv asellditeh vgtindvsgr
      301 arlflglpda fldaflilwi ftslsktleq lqakrisvkl diyrkfsnal avaviasvaw
      361 ityeiyfkat dpfnerwqsa wiitafwdil sfallcvicy lwapsqssqr yaysedvgee
      421 fddeeaqslt rgqsngdvsl vkqeqkngna aisdeedese edkre
//
LOCUS       XP_016748720             463 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016748720
VERSION     XP_016748720.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893231.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748720.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..463
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52255
     Region          67..141
                     /region_name="GIY-YIG_SLX1"
                     /note="Catalytic GIY-YIG domain of yeast
                     structure-specific endonuclease subunit SLX1 and its
                     eukaryotic homologs; cd10455"
                     /db_xref="CDD:198402"
     Site            order(69..71,85..87)
                     /site_type="other"
                     /note="GIY-YIG motif/motif A"
                     /db_xref="CDD:198402"
     Site            order(71,85,87,95,99,135)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:198402"
     Site            135
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:198402"
     CDS             1..463
                     /gene="LOC107957684"
                     /coded_by="XM_016893231.2:145..1536"
                     /db_xref="GeneID:107957684"
ORIGIN      
        1 mrrgkiapdg netrkrsekg dskslnayfk qrksrtegfk cqdlegenqe qiresgnenk
       61 gkpgkgffac ylltslsprh kghtyigftv nplrrirqhn geigsgawrt ksrrpwemvv
      121 ciygfptnvs alqfewawqh pqesvavrqa aatfksfsgv tnkiklaytm ltlpawksln
      181 itvnyfstky tnhsascpsl peqmkvkvsp mdelpcytep nefeykddcd nldeydevsd
      241 acetvpetyp nevvivsadn lhsiiheach eqsehieeyg trkpgessnl gvdmsiagke
      301 slrgmrfkya veadedpqps vkekpsttde eyeklgdtct fgvyhrqpfd vicsplqass
      361 svvtslsnee taegtnirii ekecriqkqf safvaasgdq qswrkgkplt tevavlkdhv
      421 psfdvirepe vidlltpsps yrvrpctkkr riskfspeii dlt
//
LOCUS       XP_040941935             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941935
VERSION     XP_040941935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086001.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18229
     Region          <1..>54
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..158
                     /gene="LOC107923852"
                     /coded_by="XM_041086001.1:807..1283"
                     /db_xref="GeneID:107923852"
ORIGIN      
        1 mltqdgtlcy fspcieqvqr scetlisdlt diwtfeillr myeirewkmd hskllcnhvp
       61 akhtcysril kshpssdcnf rflflghrpf iltqdtsiag keslrgmrfk yamesdedpq
      121 psvkekpstt deeyeklgdt ctfgvyhsqp fdvicspv
//
LOCUS       XP_016703815             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703815
VERSION     XP_016703815.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848326.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703815.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35569
     CDS             1..314
                     /gene="LOC107918741"
                     /coded_by="XM_016848326.2:124..1068"
                     /db_xref="GeneID:107918741"
ORIGIN      
        1 matpptpllk inlwtirsey criikahsrh flalsllfll pfsfflsiyp fiaiefylsf
       61 lqqdpsifpt ktfilnllyt lpisifslla tgsitysifh gfygrpikll saikaaftsf
      121 fhlfstclvt qlivsgisli lglafsavvi lgiqfhypsp yfiflclvym iillfivvhl
      181 qvnwifayvv vvvesswgfk plkrsrnlvk gmkgvalkii lffgffisin twrsvmtygd
      241 saadkwtswl fvlnifvtst fsmefmfynl aantvfyiya kglhgelaed eefaakyvsl
      301 avddgkaphv vsvv
//
LOCUS       XP_016674560             281 aa            linear   PLN 06-AUG-2024
DEFINITION  putative SNAP25 homologous protein SNAP30 [Gossypium hirsutum].
ACCESSION   XP_016674560
VERSION     XP_016674560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="putative SNAP25 homologous protein SNAP30"
                     /calculated_mol_wt=30868
     Region          86..149
                     /region_name="SNARE_SNAP25N_23N_29N_SEC9N"
                     /note="N-terminal SNARE motif of SNAP25, SNAP23, SNAP29,
                     and SEC9; cd15861"
                     /db_xref="CDD:277214"
     Site            order(87,90..95,97..102,104..105,108..109,111..116,
                     118..119,121..123,125..130,132..133,135..137,139..140,
                     142..144,146..147,149)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277214"
     Site            122
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277214"
     Region          220..278
                     /region_name="SNARE_Qc"
                     /note="SNARE motif, subgroup Qc; cd15841"
                     /db_xref="CDD:277194"
     Site            order(224..227,229..231,233..235,237..238,240..245,
                     247..248,250..251,254..255,257..259,261..263,265..266,
                     268..269,272..273,275..276,278)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277194"
     Site            251
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277194"
     CDS             1..281
                     /gene="LOC107893925"
                     /coded_by="XM_016819071.2:485..1330"
                     /db_xref="GeneID:107893925"
ORIGIN      
        1 mfgfmkpkqk gdspaesdtm tparrttsep amlvpesied dnggrkkqss astrasparn
       61 nrdkykddfr dsgglenqtm edlegyavyk aeettstvnn clkiaenirs datktldtlh
      121 aqgeqierth qmavnidkdl nkgekllnnl ggmfsmpwkp kktkeitgpv itsddnkksk
      181 aatkeqrekl gvapvpkska gsktptpept daiqkvelek qkqdnglsdl sdilgdlkgm
      241 aldmgseldr qnkaldhlge didelnsrvk ganqrarhll k
//
LOCUS       XP_016674562             346 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674562
VERSION     XP_016674562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819073.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..346
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38228
     Region          240..341
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..346
                     /gene="LOC107893927"
                     /coded_by="XM_016819073.2:153..1193"
                     /db_xref="GeneID:107893927"
ORIGIN      
        1 menfmkqmrg rfsgaehgkt eesssirnqr mppqktrsfk aertqnwfgk pfsgkmtswn
       61 ddsnhkpeqv lavaaaaaty vinsiaepsi qdqkktsagl gpsltrdksr kedksfstsk
      121 pgtvskqfsg kgstkgsgsa eskvavpdgm ddnetksaps lkrpltfady lgntsitkqr
      181 ssskpdmlss qtesaalkpd vstikpasta pkpdhpairt aagrpeeppt ieprpeteqt
      241 kaedwekdem akikerykkl nstilaweek kkkkaknkld rtesglerkr arallkfkne
      301 meyikqavdg araqaeasqk kdelkakeka niirktgevp racfcc
//
LOCUS       XP_016674563             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674563
VERSION     XP_016674563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819074.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..258
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28827
     Region          42..98
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(44,47,63,65,68,71,95,98)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438249"
     CDS             1..258
                     /gene="LOC107893928"
                     /coded_by="XM_016819074.2:159..935"
                     /db_xref="GeneID:107893928"
ORIGIN      
        1 mwgfasnaia siglknskes sracsefsdd dvcsngsrde glecpicwes fnivenvpyv
       61 lwcghtlcqn cilglqpavl klptsqfeip lfvscpwchl lslrlvykgn lkfpsknffl
      121 lwmieslngd rygvvrrasp gdnqcnlmlg nqassgvvrr elyahgsqqi rsgdnggssn
      181 verhhrfsly kslyffvhlt tkfplvimll livffaipgs vvilllyllv tvvfavpsll
      241 vmyfafpmln rlvreias
//
LOCUS       XP_040941936             443 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 13 [Gossypium hirsutum].
ACCESSION   XP_040941936
VERSION     XP_040941936.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086002.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..443
                     /product="UDP-glycosyltransferase 13"
                     /calculated_mol_wt=48508
     Region          8..425
                     /region_name="GT1_Gtf-like"
                     /note="UDP-glycosyltransferases and similar proteins;
                     cd03784"
                     /db_xref="CDD:340817"
     Site            order(19..20,22,165,168..169,173,205,258,338,340,342..343,
                     346)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,258,338,340,342..343)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..443
                     /gene="LOC107893931"
                     /coded_by="XM_041086002.1:454..1785"
                     /db_xref="GeneID:107893931"
ORIGIN      
        1 msssdgnlhv allpssgmgh llpylrlaas lihhqcsltl ftthpivssa esqlistfls
       61 afpqitqkkf tpipldpvaa nitdpfqlqw etirqsahll splisssspp lsfiitdvtl
      121 mssvisvtak lclpnyilft ssarmlslfs cfpsipssip keslppilld snssftknfs
      181 dnsgslkhfn gvlinsfeel ekeslemlas gnltkglppv fplgpfqple lerisllapl
      241 kwlenqeess vvyvsfgsrt amskeqirel gnglvlsgck flwvvkskvv dkeeeeglde
      301 ilghqlmkki ennglvvkew vdqwqilsqk avggfishcg wnsvveaach gipvlgwpqq
      361 gdqminaevi eaggwglcmk swgwgsnhlv kgveigdkik elmgnqrmkm ecarisevak
      421 qrskagegce nmlktlfqsl tks
//
LOCUS       XP_040941937             569 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941937
VERSION     XP_040941937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086003.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..569
                     /product="protein GDAP2 homolog isoform X1"
                     /calculated_mol_wt=63968
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          416..549
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..569
                     /gene="LOC121212699"
                     /coded_by="XM_041086003.1:222..1931"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrsvpvqil eyrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg
      361 wncakmlgfg diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm
      421 vvvgahfllr clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil
      481 grkhqrnlha iyvlhptfhl ktaifalqmf vdkvvwkkvv yvdrllqlfk yvpreqltip
      541 dfvfqhdiev nggkglivdp rtkyiyhrp
//
LOCUS       XP_040941938             569 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941938
VERSION     XP_040941938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086004.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..569
                     /product="protein GDAP2 homolog isoform X1"
                     /calculated_mol_wt=63968
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          416..549
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..569
                     /gene="LOC121212699"
                     /coded_by="XM_041086004.1:242..1951"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrsvpvqil eyrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg
      361 wncakmlgfg diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm
      421 vvvgahfllr clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil
      481 grkhqrnlha iyvlhptfhl ktaifalqmf vdkvvwkkvv yvdrllqlfk yvpreqltip
      541 dfvfqhdiev nggkglivdp rtkyiyhrp
//
LOCUS       XP_040941939             568 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941939
VERSION     XP_040941939.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086005.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..568
                     /product="protein GDAP2 homolog isoform X2"
                     /calculated_mol_wt=63869
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          416..548
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..568
                     /gene="LOC121212699"
                     /coded_by="XM_041086005.1:222..1928"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrsvpvqil eyrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg
      361 wncakmlgfg diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm
      421 vvvgahfllr clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil
      481 grkhqrnlha iyvlhptfhl ktaifalqmf vdkvwkkvvy vdrllqlfky vpreqltipd
      541 fvfqhdievn ggkglivdpr tkyiyhrp
//
LOCUS       XP_040941940             559 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941940
VERSION     XP_040941940.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086006.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..559
                     /product="protein GDAP2 homolog isoform X3"
                     /calculated_mol_wt=62783
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          406..539
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..559
                     /gene="LOC121212699"
                     /coded_by="XM_041086006.1:222..1901"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg wncakmlgfg
      361 diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm vvvgahfllr
      421 clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil grkhqrnlha
      481 iyvlhptfhl ktaifalqmf vdkvvwkkvv yvdrllqlfk yvpreqltip dfvfqhdiev
      541 nggkglivdp rtkyiyhrp
//
LOCUS       XP_040941941             559 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941941
VERSION     XP_040941941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086007.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..559
                     /product="protein GDAP2 homolog isoform X3"
                     /calculated_mol_wt=62783
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          406..539
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..559
                     /gene="LOC121212699"
                     /coded_by="XM_041086007.1:238..1917"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg wncakmlgfg
      361 diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm vvvgahfllr
      421 clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil grkhqrnlha
      481 iyvlhptfhl ktaifalqmf vdkvvwkkvv yvdrllqlfk yvpreqltip dfvfqhdiev
      541 nggkglivdp rtkyiyhrp
//
LOCUS       XP_040941942             558 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941942
VERSION     XP_040941942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086008.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..558
                     /product="protein GDAP2 homolog isoform X4"
                     /calculated_mol_wt=62684
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          406..538
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..558
                     /gene="LOC121212699"
                     /coded_by="XM_041086008.1:222..1898"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg wncakmlgfg
      361 diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm vvvgahfllr
      421 clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil grkhqrnlha
      481 iyvlhptfhl ktaifalqmf vdkvwkkvvy vdrllqlfky vpreqltipd fvfqhdievn
      541 ggkglivdpr tkyiyhrp
//
LOCUS       XP_040941943             558 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941943
VERSION     XP_040941943.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086009.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..558
                     /product="protein GDAP2 homolog isoform X4"
                     /calculated_mol_wt=62684
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          406..538
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..558
                     /gene="LOC121212699"
                     /coded_by="XM_041086009.1:240..1916"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg wncakmlgfg
      361 diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm vvvgahfllr
      421 clelerfily vvkefepliq kpytivyfhs aaslqvqpdl gwmrrlqqil grkhqrnlha
      481 iyvlhptfhl ktaifalqmf vdkvwkkvvy vdrllqlfky vpreqltipd fvfqhdievn
      541 ggkglivdpr tkyiyhrp
//
LOCUS       XP_040941944             469 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040941944
VERSION     XP_040941944.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086010.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..469
                     /product="protein GDAP2 homolog isoform X5"
                     /calculated_mol_wt=51906
     Region          82..250
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(102,113,115,157,194..201)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          405..>457
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..469
                     /gene="LOC121212699"
                     /coded_by="XM_041086010.1:222..1631"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 myrpvataaa tggvptdngd yvvtldqvpr wndaeirssl eyenedpsfs ksflsdplts
       61 hgeesgtngl asrfpvdhei nskiylwrgq pwnlevdavv nstnenmdev hssqglhaaa
      121 gpglaeecat lggcrtgmak vtnaydlpar rvihtvgpky avkyhsaaen alshcyrscl
      181 ellienglrs iamgciytea knyprepaah vairtvrrll ekqkdkitav vfctstssdt
      241 eiykrllply lprdkheeav aisklpadvg dengetinhe rkirikplpk kvipkpsqsp
      301 aevpasdvgl vqrsvpvqil eyrnssyldt yldpafmslm kdpdqrrqeq wektaqaqgg
      361 wncakmlgfg diggpplsaa eeyslhsryl akanslnlse iaemkilyrg gvdsegrpvm
      421 vvvgahfllr clelerfily vvkefepliq kpytivyfhs aaslqviia
//
LOCUS       XP_040941945             463 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GDAP2 homolog isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040941945
VERSION     XP_040941945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086011.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..463
                     /product="protein GDAP2 homolog isoform X6"
                     /calculated_mol_wt=52241
     Region          2..144
                     /region_name="Macro_GDAP2-like"
                     /note="macrodomain, GDAP2-like family; cd02905"
                     /db_xref="CDD:394876"
     Site            order(7,9,51,88..95)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394876"
     Region          310..443
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..463
                     /gene="LOC121212699"
                     /coded_by="XM_041086011.1:142..1533"
                     /db_xref="GeneID:121212699"
ORIGIN      
        1 mdevhssqgl haaagpglae ecatlggcrt gmakvtnayd lparrvihtv gpkyavkyhs
       61 aaenalshcy rsclellien glrsiamgci yteaknypre paahvairtv rrllekqkdk
      121 itavvfctst ssdteiykrl lplylprdkh eeavaisklp advgdenget inherkirik
      181 plpkkvipkp sqspaevpas dvglvqrsvp vqileyrnss yldtyldpaf mslmkdpdqr
      241 rqeqwektaq aqggwncakm lgfgdiggpp lsaaeeyslh srylakansl nlseiaemki
      301 lyrggvdseg rpvmvvvgah fllrcleler filyvvkefe pliqkpytiv yfhsaaslqv
      361 qpdlgwmrrl qqilgrkhqr nlhaiyvlhp tfhlktaifa lqmfvdkvvw kkvvyvdrll
      421 qlfkyvpreq ltipdfvfqh dievnggkgl ivdprtkyiy hrp
//
LOCUS       XP_016705668             340 aa            linear   PLN 06-AUG-2024
DEFINITION  clp protease adapter protein ClpF, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016705668
VERSION     XP_016705668.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850179.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016705668.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..340
                     /product="clp protease adapter protein ClpF,
                     chloroplastic"
                     /calculated_mol_wt=38165
     Region          160..192
                     /region_name="UVR"
                     /note="UvrB/uvrC motif; pfam02151"
                     /db_xref="CDD:308001"
     Region          208..307
                     /region_name="YccV-like"
                     /note="Hemimethylated DNA-binding protein YccV like;
                     pfam08755"
                     /db_xref="CDD:430193"
     CDS             1..340
                     /gene="LOC107920449"
                     /coded_by="XM_016850179.2:334..1356"
                     /db_xref="GeneID:107920449"
ORIGIN      
        1 mvqtlslsst lttsgntaiy gtevggrrqf eiigkghmky gisrqyfwhg yvpsfyfngn
       61 pnlmkkrnfg vkvgwpfkgg drelgasser setanedili fffqldlatq vqralnleey
      121 efaqqlrnkl teveaeilkq qeakrglssk seaqdkalsl vrlrgelhna ienenyalaa
      181 qlrddisile aeslaasaka layekaqyaf rlgqkvqhkf fgyravicgm dpvccesstw
      241 meaaqvekls hgsnqpfyqv lvdvyadpnl lvayvpeenl lapeqpdlrr fdhpyvpflf
      301 ygmdaagdfi pikqlrekyn rprheipldp egdegggaaa
//
LOCUS       XP_016674926            1074 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674926
VERSION     XP_016674926.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819437.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1074
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=118202
     Region          146..1064
                     /region_name="DUF863"
                     /note="Plant protein of unknown function (DUF863);
                     pfam05904"
                     /db_xref="CDD:461776"
     CDS             1..1074
                     /gene="LOC107894203"
                     /coded_by="XM_016819437.2:486..3710"
                     /db_xref="GeneID:107894203"
ORIGIN      
        1 mwvrgmgtkv qsksylpgfy smrdfnedsn gcswplycgd ktltsgqyyn sffpraiadv
       61 ypeydkdrlk rtmleheaif hnqvselhrl yriqrdlmde vkkkelqkdq vptgpslsss
      121 llasqittev ahkchipnfp kansvcgrps isgvedahsc lssvkgssiq agpflskngv
      181 nlkdvevlec rptkvrrkmf dlqlpadtyi dieeaeefrn dtasefstyl pngngkiepe
      241 sdgkpfpngv gktschgdgs ksdacskgks cladlnepve ieetngsayp hflphdryhr
      301 ghelsakpkp ellgfpkdis vnshrqsdnr sitnlyvenn enargflshv leaghskgns
      361 msisqsfqaq klpvpyqqvq vlfekahdpp tfsltdrsra dfsrdrmlqs fevsgrnhei
      421 snnshpeskm iskvslnlfa ssdtvnpwsh sissmekpss slnqkslsvq tlpslnsygp
      481 yskssgisph snesfsekrk essnsklnpa fgsefsyrng fhygsssgsk elgvqlfsts
      541 ygsnvgkvvs eqfptdncsn gvdmksaigv nlnvvlsnns snmpvtqqgp qidlrrkheg
      601 hlpglpwlra kpackneais armdlnlnvg eliffqsssk kstnksetgn gfsqiftqnv
      661 ksisssnnad anrseisecl hdkrilgvpi fekhyvsene ssftspyvsg sqpsegeaen
      721 kgrnvlldin lpcdasldas qdnvaensai ekeadmkiss frhqidlnsc avedeasfil
      781 nvpstarkmt ggidleapli pepkdvihge elsekahnlp lvsaesgdes lqdgpmksaa
      841 eaivaisssg hcshlddvsc nssetsttdp lnwfaetvss fgkdleskle aisrdkdrgr
      901 dessleeids fesmvlrlae tkeedympep lvpenfkvee tgstsllttr trkgqgrrgr
      961 qrrdfqrdil pglaslsrhe vtqdlqtfgg lmratghswn sgltrrncgr grrrsittsp
     1021 pasaaatsht plmqqlnnte lglddgsltg wgkttrrprr qrcpagnlps lalt
//
LOCUS       XP_040941946            1050 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941946
VERSION     XP_040941946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086012.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1050
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=115583
     Region          146..1040
                     /region_name="DUF863"
                     /note="Plant protein of unknown function (DUF863);
                     pfam05904"
                     /db_xref="CDD:461776"
     CDS             1..1050
                     /gene="LOC107894203"
                     /coded_by="XM_041086012.1:486..3638"
                     /db_xref="GeneID:107894203"
ORIGIN      
        1 mwvrgmgtkv qsksylpgfy smrdfnedsn gcswplycgd ktltsgqyyn sffpraiadv
       61 ypeydkdrlk rtmleheaif hnqvselhrl yriqrdlmde vkkkelqkdq vptgpslsss
      121 llasqittev ahkchipnfp kansvcgrps isgvedahsc lssvkgssiq agpflskngv
      181 nlkdvevlec rptkvrrkmf dlqlpadtyi dieeaeefrn dtasefstyl pngngkiepe
      241 sdgkpfpngv gktschgdgs ksdacskgks cladlnepve ieetngsayp hflphdryhr
      301 ghelsakpkp ellgfpkdis vnshrqsdnr sitnlyvenn enargflshv leaghskgns
      361 msisqsfqaq klpvpyqqvq vlfekahdpp tfsltdrsra dfsrdrmlqs fevsgrnhei
      421 snnshpeskm iskpssslnq kslsvqtlps lnsygpysks sgisphsnes fsekrkessn
      481 sklnpafgse fsyrngfhyg sssgskelgv qlfstsygsn vgkvvseqfp tdncsngvdm
      541 ksaigvnlnv vlsnnssnmp vtqqgpqidl rrkheghlpg lpwlrakpac kneaisarmd
      601 lnlnvgelif fqssskkstn ksetgngfsq iftqnvksis ssnnadanrs eiseclhdkr
      661 ilgvpifekh yvsenessft spyvsgsqps egeaenkgrn vlldinlpcd asldasqdnv
      721 aensaiekea dmkissfrhq idlnscaved easfilnvps tarkmtggid leaplipepk
      781 dvihgeelse kahnlplvsa esgdeslqdg pmksaaeaiv aisssghcsh lddvscnsse
      841 tsttdplnwf aetvssfgkd leskleaisr dkdrgrdess leeidsfesm vlrlaetkee
      901 dympeplvpe nfkveetgst sllttrtrkg qgrrgrqrrd fqrdilpgla slsrhevtqd
      961 lqtfgglmra tghswnsglt rrncgrgrrr sittsppasa aatshtplmq qlnntelgld
     1021 dgsltgwgkt trrprrqrcp agnlpslalt
//
LOCUS       XP_016674492             475 aa            linear   PLN 06-AUG-2024
DEFINITION  xylan glycosyltransferase MUCI21 [Gossypium hirsutum].
ACCESSION   XP_016674492
VERSION     XP_016674492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819003.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..475
                     /product="xylan glycosyltransferase MUCI21"
                     /calculated_mol_wt=53591
     Region          163..401
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..475
                     /gene="LOC107893863"
                     /coded_by="XM_016819003.2:126..1553"
                     /db_xref="GeneID:107893863"
ORIGIN      
        1 mkkilgssra aiattlfcll llwfhtmsls mssisrinni iaatslswss stytfnndqe
       61 trvqiptvas qqnnrlltrg elpmsnqisc nrtclrydlc tidgstvldp ttstfftmdp
      121 tspvhvekir pyprkyedyi mgqikelnlv sgpsspqcti rheapaivfs agghtgnlfh
      181 afndgliplf itassfypdg dfiivvsefh dwwqskyaei lkvlskhpiv alekdnathc
      241 fpsatlglia hgfmtidptl iptsktlmhf rdliekaytq npilpsppld pkperrprlv
      301 ltcrgndvss rrilnqdevi qvmkeigfdv ivfqpnryts lseayamlns shvmvgvhga
      361 althalflrp rsvfmqvvpi gtewatdafy griakglnvn yleykirvee sslmekygkd
      421 nvllkdpsav qkkgwpteim diylkqqnvk ldlvrfrksl ksaylmakkf mhker
//
LOCUS       XP_016674493             371 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETARDED ROOT GROWTH, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016674493
VERSION     XP_016674493.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819004.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..371
                     /product="protein RETARDED ROOT GROWTH, mitochondrial"
                     /calculated_mol_wt=42006
     Region          147..318
                     /region_name="DUF155"
                     /note="RMND1/Sif2-Sif3/Mrx10, DUF155; pfam02582"
                     /db_xref="CDD:460604"
     CDS             1..371
                     /gene="LOC107893864"
                     /coded_by="XM_016819004.2:160..1275"
                     /db_xref="GeneID:107893864"
ORIGIN      
        1 mgrwraaasl lfthltktsf pslppkplfl slssspafcf llarpfsall sqlpiypsds
       61 engspcfsqq nhgfvsqeee eeigkipika yflctsidlk smqaenlsni vppssrssny
      121 ialrycdfpp gvtalgmndk vsscrymvif qygsavlfni edrevesyle ivqrhasglr
      181 pemrrddycv keqpllakdm qggpdyivvk tldtdsirii gsvlgqsial dyfvsqvdgm
      241 veefaninra mektgtftmd rtkliklvgk ansnladvil kvglfersei awreakyaqi
      301 yeylreeyev tqrfgnldfk lkfvehnihf lqeviqnrrs dllewciifl laieniiaiy
      361 eivlestgvs f
//
LOCUS       XP_016674494             327 aa            linear   PLN 06-AUG-2024
DEFINITION  chorismate mutase 1, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674494
VERSION     XP_016674494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819005.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..327
                     /product="chorismate mutase 1, chloroplastic isoform X1"
                     /calculated_mol_wt=36876
     Region          60..327
                     /region_name="PLN02344"
                     /note="chorismate mutase"
                     /db_xref="CDD:177978"
     CDS             1..327
                     /gene="LOC107893865"
                     /coded_by="XM_016819005.2:94..1077"
                     /db_xref="GeneID:107893865"
ORIGIN      
        1 meskllelpf ssifnqnaak sstpishftp rnafkvmgss fganvyrslg ishssssnir
       61 fskkprvdes enltlnsirq slirqedsii cslleraqyc ynpdtynqda fsmdgfhgsl
      121 slvefmvwet erlhaqvgry kspdehpffp sylsepmlpp lqypkfnvss pnasiscltk
      181 sstdiitlmk llprlvkagd dgncgstavc dtmclqalsk rihygkfvae akfrespkty
      241 edairakdrs rlmelltyet vetavkkrvd mktktygqel nfqlngvaav pdpvykieps
      301 lvadlygdwi mpltkevqve yllrrld
//
LOCUS       XP_016674495             324 aa            linear   PLN 06-AUG-2024
DEFINITION  chorismate mutase 3, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674495
VERSION     XP_016674495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819006.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="chorismate mutase 3, chloroplastic isoform X2"
                     /calculated_mol_wt=36793
     Region          60..324
                     /region_name="PLN02344"
                     /note="chorismate mutase"
                     /db_xref="CDD:177978"
     CDS             1..324
                     /gene="LOC107893865"
                     /coded_by="XM_016819006.2:94..1068"
                     /db_xref="GeneID:107893865"
ORIGIN      
        1 meskllelpf ssifnqnaak sstpishftp rnafkvmgss fganvyrslg ishssssnir
       61 fskkprvdes enltlnsirq slirqedsii cslleraqyc ynpdtynqda fsmdgfhgsl
      121 slvefmvwet erlhaqvgry kspdehpffp sylsepmlpp lqypkvlhhc aasininnkv
      181 wnmyfaellp rlvkagddgn cgstavcdtm clqalskrih ygkfvaeakf respktyeda
      241 irakdrsrlm elltyetvet avkkrvdmkt ktygqelnfq lngvaavpdp vykiepslva
      301 dlygdwimpl tkevqveyll rrld
//
LOCUS       XP_016674496             178 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g01610 [Gossypium hirsutum].
ACCESSION   XP_016674496
VERSION     XP_016674496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819007.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..178
                     /product="uncharacterized protein At5g01610"
                     /calculated_mol_wt=19990
     Region          60..166
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..178
                     /gene="LOC107893866"
                     /coded_by="XM_016819007.2:535..1071"
                     /db_xref="GeneID:107893866"
ORIGIN      
        1 mekaltkvgs lkvgglwisk kakeefsnit edlttfsntv eekakwvfnk lkgkptkslp
       61 dllreynlpp glfpqnvicy efdetkakli vymsspcevs fkdssvirya trvkgillrg
      121 kltgiegmkt kvlvwvkvts vavegyksdk vwftagvkks rpkdayetpr davrveef
//
LOCUS       XP_016674497             329 aa            linear   PLN 06-AUG-2024
DEFINITION  isopentenyl phosphate kinase [Gossypium hirsutum].
ACCESSION   XP_016674497
VERSION     XP_016674497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819008.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..329
                     /product="isopentenyl phosphate kinase"
                     /calculated_mol_wt=35367
     Region          11..325
                     /region_name="AAK_FomA-like"
                     /note="This CD includes a fosfomycin biosynthetic gene
                     product, FomA, and similar proteins found in a wide range
                     of organisms. Together, the fomA and fomB genes in the
                     fosfomycin biosynthetic gene cluster of Streptomyces
                     wedmorensis confer high-level fosfomycin...; cd04241"
                     /db_xref="CDD:239774"
     Site            order(15,17..19,222..223,226..227)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:239774"
     Site            order(15,17..18,94..96,200..202)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:239774"
     CDS             1..329
                     /gene="LOC107893867"
                     /coded_by="XM_016819008.2:243..1232"
                     /db_xref="GeneID:107893867"
ORIGIN      
        1 meetnlnqti rcivklggaa itckneleki neenletvss hlrqamnlgs cstqvvgmdw
       61 skrdavsdis sslcdfgdqc qfnvdfsrfv vvhgagsfgh fqasksgvhk gglnqplvka
      121 gfvatrisvt tlnleivral aregipsigm spyscgwsts ernvasadls gvakaidsgf
      181 ipvlhgdavl derlgctils gdviirhlae hlrpeyvvfl tdvsgvydrp ptdpnavllr
      241 eiavdedgkw svvkptpqsl nkqveitvaa hdttggmvtk iseaamiakl gidvyivkaa
      301 tshslralrg elrhgipddw lgtvirfsr
//
LOCUS       XP_016686766             113 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome c [Gossypium hirsutum].
ACCESSION   XP_016686766
VERSION     XP_016686766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831277.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..113
                     /product="cytochrome c"
                     /calculated_mol_wt=12070
     Region          6..111
                     /region_name="DHOR"
                     /note="Di-haem oxidoreductase, putative peroxidase;
                     cl21467"
                     /db_xref="CDD:473872"
     CDS             1..113
                     /gene="LOC107904786"
                     /coded_by="XM_016831277.2:130..471"
                     /db_xref="GeneID:107904786"
ORIGIN      
        1 masfaqappg dsksgekifk tkcaqchtve kaaghkqgpn lnglfgrqsg tapgysysaa
       61 nksmaviwge ntlydyllnp kkyipgtkmv fpglkkpqer adliaylkes tas
//
LOCUS       XP_016674944             426 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: receptor-like kinase LIP2 [Gossypium
            hirsutum].
ACCESSION   XP_016674944
VERSION     XP_016674944.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819455.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674944.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..426
                     /product="LOW QUALITY PROTEIN: receptor-like kinase LIP2"
                     /calculated_mol_wt=46992
     Region          70..339
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(70..74,78,91,93,122,138..141,145,147,192,194,
                     196..197,199,210,213,231..234)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(70..74,78,91,93,122,138..141,145,192,194,196..197,
                     199,210)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(74,145,147,192,194,196,213,231..234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(209..216,227..234)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..426
                     /gene="LOC107894216"
                     /coded_by="XM_016819455.2:273..1553"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107894216"
ORIGIN      
        1 mncfpcfstq kgkkengkrd hdssadelir arilasmeen qaehakiaaq rfsfrdlaaa
       61 tknfrqecll geggfgrvyk gtlqangqvv avkqldrnvm kgckeflvev arlsllqhan
      121 lvnligycad gdqrllvydf mpggslednl lapkdevkpq ldwltrmkia ygaaqaleyl
      181 hdkanppviy rdlkssnvll deefnpklsd igldkldhss ekmpmqsrxm gtygysapey
      241 srsgrlttva dvysfgvvll elitgrraid ttkpveeqnl vawaqplfre pkkfpdmadp
      301 klkkrfperg lnqavaiaam clqdeaaarp lmsdvvtals ylsvaseenk ippalppsls
      361 sklhcisakl srecgggnqe mvdeqgdhsq sdteldvndr sdkesvsspr ssssnakpqp
      421 hekkrl
//
LOCUS       XP_016674089             328 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 3 [Gossypium hirsutum].
ACCESSION   XP_016674089
VERSION     XP_016674089.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818600.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674089.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..328
                     /product="peroxidase 3"
                     /calculated_mol_wt=35282
     Region          27..326
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(57,60..61,63..64,67..68,97,99,163..166,172,176,186,
                     189..190,192..193,195..199,201..202,245,268,270,303)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(57,60..61,63..64,67,95,97,99,163..165,172,176,186,
                     189..190,192..193,195..199,202,245,268,270,303)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(64,93..94,163..166,199,201..202)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(69,72,76,78,194,246,249,252,254)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..328
                     /gene="LOC107893566"
                     /coded_by="XM_016818600.2:148..1134"
                     /db_xref="GeneID:107893566"
ORIGIN      
        1 magtssariv lvvvsgvlal igsaqaqlqm nfyasscpka eqivldyvkq nipnapslaa
       61 sflrmhfhdc ivrgcdasvl lnstsgqvek navpnrtlrg fdfiervksl leaecpgvvs
      121 cadilalvar dsvlttgdpf wnvptgrrdg visniteana nipspfhnft tlltlfsnqg
      181 lnltdlvlls gghtigishc pavsrrlyns tgaggidptm dseyaenlka nkcktasdnt
      241 tildmdpgsr ktfdlsyysl llkrrglfqs daalttdsts lafinqllts spqfffdefa
      301 kamekmgrvn vktgsegqir kqcalvnn
//
LOCUS       XP_016674086             328 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: peroxidase 3 [Gossypium hirsutum].
ACCESSION   XP_016674086
VERSION     XP_016674086.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818597.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674086.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..328
                     /product="LOW QUALITY PROTEIN: peroxidase 3"
                     /calculated_mol_wt=35011
     Region          27..326
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(57,60..61,63..64,67..68,97,99,163..166,172,176,186,
                     189..190,192..193,195..199,201..202,245,268,270,303)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(57,60..61,63..64,67,95,97,99,163..165,172,176,186,
                     189..190,192..193,195..199,202,245,268,270,303)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(64,93..94,163..166,199,201..202)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(69,72,76,78,194,246,249,252,254)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..328
                     /gene="LOC107893565"
                     /coded_by="XM_016818597.2:148..1134"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107893565"
ORIGIN      
        1 magtssariv lvvvsgvlal igsaqaqlqm nfyasscpka eqivldyvkq nipnapslaa
       61 sflrmhfhdc ivrgcdasvl lnstsgqaek navpnltlxg fdfiervksl leaecpgvvs
      121 cadilalvar dsvlttggpf wnvptgrrdg visniteana nipspfhnft tlltlfsnqg
      181 lnltdlvlls gghtigishc pavsrrlyns tgaggidptm dseyaenlka nkcktasdnt
      241 tilemdpgsr ktfdlsyysl llkrrglfqs daalttdsts lafinqllts spqfffdefa
      301 kamekmgrvn vktgsegqir kqcalvnn
//
LOCUS       XP_016675551             133 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H2B-like [Gossypium hirsutum].
ACCESSION   XP_016675551
VERSION     XP_016675551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820062.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..133
                     /product="histone H2B-like"
                     /calculated_mol_wt=14583
     Region          43..131
                     /region_name="HFD_H2B"
                     /note="histone-fold domain found in histone H2B and
                     similar proteins; cd22910"
                     /db_xref="CDD:467035"
     Site            order(43,47..49,51..52,55..57,62..64,68,104,108,117..118,
                     120..121,124..125,127..128,131)
                     /site_type="other"
                     /note="Hif1 binding site [polypeptide binding]"
                     /db_xref="CDD:467035"
     Site            order(44,46,48..50,52..54,57..64,66..67,70..71,74..75,
                     77..79,81..83,87,97..98,100,103..104,107,110..112,115,
                     118..120,122..123,126..127,130..131)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467035"
     Site            order(70,73..74,76..77,80,85,88,91..93,101..102,105,
                     109..110)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467035"
     CDS             1..133
                     /gene="LOC107894878"
                     /coded_by="XM_016820062.2:86..487"
                     /db_xref="GeneID:107894878"
ORIGIN      
        1 mapkaekkpa ekkpvaekap asvekkiske ggdkkkkkik kstetykiyi fkvlkqvhpd
       61 igisskamgi mnsfindife klaqeasrla rynkkptits reiqtavrlv lpgelakhav
      121 segtkavtkf tss
//
LOCUS       XP_016674359             243 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SODIUM POTASSIUM ROOT DEFECTIVE 3 [Gossypium hirsutum].
ACCESSION   XP_016674359
VERSION     XP_016674359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..243
                     /product="protein SODIUM POTASSIUM ROOT DEFECTIVE 3"
                     /calculated_mol_wt=26428
     Region          167..220
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(172..174,177)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     CDS             1..243
                     /gene="LOC107893782"
                     /coded_by="XM_016818870.2:245..976"
                     /db_xref="GeneID:107893782"
ORIGIN      
        1 mnilcasqvt msiclsmdea vssscssavq lggraidrhn piirdakrfn tnpspynqlr
       61 kngngssrks kstdhkkkks wtkksslklp tdiedsngrk gidfvtppgs sryllgnsgf
      121 ldeisdydpv walvpfqenq ikdvkrdqsv vsepsfsdkp skdkvvvlrv slhckgcegk
      181 vrkhisrmkg vrsysidfaa kkvtivgnvt plgvlasvsk vksaqfwtpa tpalastnls
      241 ank
//
LOCUS       XP_040941948             467 aa            linear   PLN 06-AUG-2024
DEFINITION  laccase-7 [Gossypium hirsutum].
ACCESSION   XP_040941948
VERSION     XP_040941948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086014.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..467
                     /product="laccase-7"
                     /calculated_mol_wt=51317
     Region          2..467
                     /region_name="laccase"
                     /note="plant; TIGR03389"
                     /db_xref="CDD:274556"
     CDS             1..467
                     /gene="LOC107951322"
                     /coded_by="XM_041086014.1:721..2124"
                     /db_xref="GeneID:107951322"
ORIGIN      
        1 mitqcpirpg ckyiykftii dqegtlwwha hvsflratvy galiirprdg hsypfpmpyk
       61 evpillgeww ntnvfdvekl avatgaapnl siaytingwp gdlypcsgnq myklkllqgr
      121 tyllriinaa lnhelffkia nhkltvvsid arytepyvtn vvvsapgqtv dvlltadqpv
      181 gsyymaatay asadgvlfdn tttrgvlayd gapssttplm pvlpdfndtp tahkfysnlt
      241 glvggphwep vplkvdheml vtiglglepc pvntsckgpk lsasmnnvsf vrptslsmlq
      301 afffnvngvy ttdfpakpti efdytnasin nnipmlfapk gtkltklkfn stveiifqnt
      361 ailgvenhpm hlhgfdfhvl aqgfgnynpa tdrkkhnsin pqmrntiavp aggwavtrft
      421 annpgvwvlh chldmhlplg latafvveng ptpettlppp pvdlpqc
//
LOCUS       XP_016675730             505 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675730
VERSION     XP_016675730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820241.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57334
     Region          221..475
                     /region_name="DUF604"
                     /note="Protein of unknown function, DUF604; pfam04646"
                     /db_xref="CDD:461378"
     CDS             1..505
                     /gene="LOC107895046"
                     /coded_by="XM_016820241.2:126..1643"
                     /db_xref="GeneID:107895046"
ORIGIN      
        1 msstretmld pfktwkflvs titikpidvl vfllkttlai fivasislff yfafsvqprw
       61 lsspicnnsq qkfiaknsss sqaygrtnls hiqfgiggsa ktwnqrrrfc elwwrpnvcr
      121 gfvwldekpp ngenlpptsp pykisedtsr fkytswygsr savrmarivk esfelgldnv
      181 rwfvmgdddt lfflenlltv lnkydhnqmy yiggnsesve qdvihsynma yggggfaisy
      241 plaaelvkvl dgcidryasf ygsdqkvqgc mseigvpatk elgfhqldir gdpygllsah
      301 plaplvslhh ldyvqpvfpg mtrigslkkl itayekdpsr alqhsfcydf krnwsisvsw
      361 gynvqlypsl vtakkletaf stfqswrtws sgpftfntrp vekdpcerpv myflgsaerv
      421 ngdttlttyv rnveesakec dkpdysrava vqffnvssar lnpaiwrtap rrqccevins
      481 gegvdslrve vkirachrfe svtpp
//
LOCUS       XP_016742778             198 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL12 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016742778
VERSION     XP_016742778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887289.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..198
                     /product="agamous-like MADS-box protein AGL12 isoform X1"
                     /calculated_mol_wt=22704
     Region          2..76
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          88..172
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..198
                     /gene="LOC107952051"
                     /coded_by="XM_016887289.2:257..853"
                     /db_xref="GeneID:107952051"
ORIGIN      
        1 mgrgrvqmkr ienpvhrqvt fckrragllk kakelsvlcd aeigvvifsa hgklyelatk
       61 gtmqeliery gkytggppad epmvepmqda kkeiemlkqe ieilqkglry mfgggceyms
      121 lnellvlekh leiwinhirs tkmdimfqei qmlrnkegim kaankclqet ieenisytdf
      181 ttmttnmmhp ltiannif
//
LOCUS       XP_016742779             197 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL12 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016742779
VERSION     XP_016742779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="agamous-like MADS-box protein AGL12 isoform X2"
                     /calculated_mol_wt=22576
     Region          2..76
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          90..171
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..197
                     /gene="LOC107952051"
                     /coded_by="XM_016887290.2:257..850"
                     /db_xref="GeneID:107952051"
ORIGIN      
        1 mgrgrvqmkr ienpvhrqvt fckrragllk kakelsvlcd aeigvvifsa hgklyelatk
       61 gtmqeliery gkytggppad epmvepmdak keiemlkqei eilqkglrym fgggceymsl
      121 nellvlekhl eiwinhirst kmdimfqeiq mlrnkegimk aankclqeti eenisytdft
      181 tmttnmmhpl tiannif
//
LOCUS       XP_016742780             184 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL12 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016742780
VERSION     XP_016742780.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887291.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..184
                     /product="agamous-like MADS-box protein AGL12 isoform X3"
                     /calculated_mol_wt=21186
     Region          2..76
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          88..160
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..184
                     /gene="LOC107952051"
                     /coded_by="XM_016887291.2:257..811"
                     /db_xref="GeneID:107952051"
ORIGIN      
        1 mgrgrvqmkr ienpvhrqvt fckrragllk kakelsvlcd aeigvvifsa hgklyelatk
       61 gtmqeliery gkytggppad epmvepmqda kkeiemlkqe ieilqkglry mfgggceyms
      121 lnellvlekh leiwinhirs tkmdimfqei qmlrnkieen isytdfttmt tnmmhpltia
      181 nnif
//
LOCUS       XP_040941949             183 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL12 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040941949
VERSION     XP_040941949.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086015.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="agamous-like MADS-box protein AGL12 isoform X4"
                     /calculated_mol_wt=21058
     Region          2..76
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          90..159
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..183
                     /gene="LOC107952051"
                     /coded_by="XM_041086015.1:257..808"
                     /db_xref="GeneID:107952051"
ORIGIN      
        1 mgrgrvqmkr ienpvhrqvt fckrragllk kakelsvlcd aeigvvifsa hgklyelatk
       61 gtmqeliery gkytggppad epmvepmdak keiemlkqei eilqkglrym fgggceymsl
      121 nellvlekhl eiwinhirst kmdimfqeiq mlrnkieeni sytdfttmtt nmmhpltian
      181 nif
//
LOCUS       XP_016742781             158 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL12 isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_016742781
VERSION     XP_016742781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="agamous-like MADS-box protein AGL12 isoform X5"
                     /calculated_mol_wt=18084
     Region          2..76
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          88..157
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..158
                     /gene="LOC107952051"
                     /coded_by="XM_016887292.2:257..733"
                     /db_xref="GeneID:107952051"
ORIGIN      
        1 mgrgrvqmkr ienpvhrqvt fckrragllk kakelsvlcd aeigvvifsa hgklyelatk
       61 gtmqeliery gkytggppad epmvepmqda kkeiemlkqe ieilqkglry mfgggceyms
      121 lnellvlekh leiwinhirs tkmdimfqei qmlrnkgs
//
LOCUS       XP_016685356             165 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase 16 kDa proteolipid subunit-like [Gossypium
            hirsutum].
ACCESSION   XP_016685356
VERSION     XP_016685356.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829867.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685356.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="V-type proton ATPase 16 kDa proteolipid
                     subunit-like"
                     /calculated_mol_wt=16542
     Region          13..121
                     /region_name="V_ATP_synt_C"
                     /note="vacuolar ATP synthase 16 kDa proteolipid subunit;
                     TIGR01100"
                     /db_xref="CDD:130170"
     Region          89..156
                     /region_name="ATP-synt_Vo_c_ATP6C_rpt2"
                     /note="V-type proton ATPase 16 kDa proteolipid subunit
                     (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins; cd18176"
                     /db_xref="CDD:349416"
     CDS             1..165
                     /gene="LOC107903720"
                     /coded_by="XM_016829867.2:210..707"
                     /db_xref="GeneID:107903720"
ORIGIN      
        1 msttfsgdet apffgflgaa aalvfscmga aygtaksgvg vasmgvmrpe lvmksivpvv
       61 magvlgiygl iiaviistgi npkaksyylf dgyahlssgl acglaglsag maigivgdag
      121 vranaqqpkl fvgmililif aealalygli vgiilssrag qsrae
//
LOCUS       XP_016674375             726 aa            linear   PLN 06-AUG-2024
DEFINITION  arginine decarboxylase [Gossypium hirsutum].
ACCESSION   XP_016674375
VERSION     XP_016674375.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818886.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674375.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..726
                     /product="arginine decarboxylase"
                     /calculated_mol_wt=78015
     Site            order(113,154,179..180,182..183,208,228,232,236,272..275,
                     493..496,501,503,505,508,542,544..546,548,594..596,
                     599..601)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143503"
     Region          115..685
                     /region_name="PLN02439"
                     /note="arginine decarboxylase"
                     /db_xref="CDD:215240"
     Site            order(152,154,177,203,253,303,306,342..343,392..395,
                     545..546,591,595,599)
                     /site_type="active"
                     /db_xref="CDD:143503"
     Site            order(152,154,177,203,253,303,306,342..343,392..395,545,
                     591)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143503"
     Site            order(154,545)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143503"
     Site            order(306,395,545..546,591,595,599)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:143503"
     CDS             1..726
                     /gene="LOC107893794"
                     /coded_by="XM_016818886.2:542..2722"
                     /db_xref="GeneID:107893794"
ORIGIN      
        1 mpalaccvda aavappgyaa ffagdsslps avpfsastad aadsnsthws pahssalyri
       61 dgwgapyfsv nnagnitvrp ygtdtlahqe idllkivkkv sdpksvgglg lqlplivrvp
      121 dvlknrlesl qsafesaiqa qgyeshyqgv ypvkcnqdrf vvedivkfga pfrfgleags
      181 kpelllamsc lckgnpeall vcngfkdaey iflallarkl alntvivlee eeevdlviei
      241 skklsvrpvi gvraklrtkh sghfgstsge kgkfglttiq ilrvvkrlqd sgmldclqll
      301 hfhigsqips tallqagvve aaqiyselvr lgadmkvidi ggglgidydg sksgnsdlsv
      361 syglqeyasa vvnavrfvcd rksikhpiic sesgraivsh hsilifeams atapttpamn
      421 qvdlpfileg lsedarvdcw nlsqaamrhe tescfvyadq lkqrcveqfk egtlgieqla
      481 avdglcdlvs kvvdasepar tyhvnlsift sipdfwsigq ifpivpihrl derpevrgil
      541 sdltcdsdgk idkfiggets lplhglegng ggssggangr yylgmflgga yqeslggvhn
      601 lfggpsvvsv sqsdgpysfa vtraapgpsc gdvlrvmqhe pelmfetlkh raeefcgqdh
      661 gnegthaalv stiarsfhnm pylvaaspcs ltamnnngfy ycneedynaa vdsgasedeq
      721 wsycya
//
LOCUS       XP_016674374              90 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S31, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016674374
VERSION     XP_016674374.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818885.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..90
                     /product="30S ribosomal protein S31, mitochondrial"
                     /calculated_mol_wt=9944
     CDS             1..90
                     /gene="LOC107893790"
                     /coded_by="XM_016818885.2:113..385"
                     /db_xref="GeneID:107893790"
ORIGIN      
        1 maiiqwcgtv atrvvmkqwp alswaspigv masppaptlc grgdkktkkg krfkgsygna
       61 rpkkekkier ikdkvevprs tpwplpfkli
//
LOCUS       XP_040941950             949 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7F [Gossypium hirsutum].
ACCESSION   XP_040941950
VERSION     XP_040941950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086016.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..949
                     /product="kinesin-like protein KIN-7F"
                     /calculated_mol_wt=106490
     Region          28..349
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(35,113,116,118..121,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          772..932
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..949
                     /gene="LOC107893789"
                     /coded_by="XM_041086016.1:315..3164"
                     /db_xref="GeneID:107893789"
ORIGIN      
        1 mgaiggeelk qvekeqkaqt agareerilv vvrlrplsdk eiianevadw ecindntily
       61 rntlregstf psaytfdrvf rgdcltkqvy eegakevals vvsginstif aygqtssgkt
      121 ytmtgiteyt vadifdyinr hkerafvlkf saieiyneai rdllssentq lklrddperg
      181 iivekvteev lrdwnhlkel laiceaqrki getslnerss rshqiirlti essareflgk
      241 ensttlaasv nfvdlagser asqslstgar lkegchinrs lltlstvirk lskgrqghin
      301 yrdskltril qpclggnart aiictlspar shveqtrntl lfaccakeva tkaqvnvvms
      361 dkalvkhlqr evarleselk spvpppsnsd yaallrrkdl qiqkmendir eltkqrdlaq
      421 srvedllsvi rndkhsgqsa rinyqpnqqe gdaweddysa sesscladsn rldvhvgkfn
      481 sihcsdtesg snieqpyhqp lnnhedhsms vsgqsldetl getaddpdey ckevqciete
      541 epardynsds rglpngeseg tlaltvygdg dgtdqeamst smngdreanh iqngiavdsl
      601 eqrlhhvqnt tdslvspdks spypqladls ssrslnlsrs lscradvmrg tsspyadrkh
      661 festppngwe kifpgrphgy gknfpllnyg anngvlsrnn sqsslgsasi ktsvdedits
      721 iqsfvagfkk qlangqiqst elevdesrks mkdvgldpmh dasstplhwp qeferlqrai
      781 lelwqacnvs lvhrtyffll fkgdpadsiy mevelrrltf lkesfsegnq aaedgrtltl
      841 assvrslhre kqtlsrllrk rfteeerekl ykkwgielns kqrrlqlvnq lwsnnkdmsh
      901 vkdsaaivak lirfveqgka lkemfglsft pphprrrsyg wknsmaslf
//
LOCUS       XP_040941951             949 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7F [Gossypium hirsutum].
ACCESSION   XP_040941951
VERSION     XP_040941951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086017.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..949
                     /product="kinesin-like protein KIN-7F"
                     /calculated_mol_wt=106490
     Region          28..349
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(35,113,116,118..121,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          772..932
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..949
                     /gene="LOC107893789"
                     /coded_by="XM_041086017.1:483..3332"
                     /db_xref="GeneID:107893789"
ORIGIN      
        1 mgaiggeelk qvekeqkaqt agareerilv vvrlrplsdk eiianevadw ecindntily
       61 rntlregstf psaytfdrvf rgdcltkqvy eegakevals vvsginstif aygqtssgkt
      121 ytmtgiteyt vadifdyinr hkerafvlkf saieiyneai rdllssentq lklrddperg
      181 iivekvteev lrdwnhlkel laiceaqrki getslnerss rshqiirlti essareflgk
      241 ensttlaasv nfvdlagser asqslstgar lkegchinrs lltlstvirk lskgrqghin
      301 yrdskltril qpclggnart aiictlspar shveqtrntl lfaccakeva tkaqvnvvms
      361 dkalvkhlqr evarleselk spvpppsnsd yaallrrkdl qiqkmendir eltkqrdlaq
      421 srvedllsvi rndkhsgqsa rinyqpnqqe gdaweddysa sesscladsn rldvhvgkfn
      481 sihcsdtesg snieqpyhqp lnnhedhsms vsgqsldetl getaddpdey ckevqciete
      541 epardynsds rglpngeseg tlaltvygdg dgtdqeamst smngdreanh iqngiavdsl
      601 eqrlhhvqnt tdslvspdks spypqladls ssrslnlsrs lscradvmrg tsspyadrkh
      661 festppngwe kifpgrphgy gknfpllnyg anngvlsrnn sqsslgsasi ktsvdedits
      721 iqsfvagfkk qlangqiqst elevdesrks mkdvgldpmh dasstplhwp qeferlqrai
      781 lelwqacnvs lvhrtyffll fkgdpadsiy mevelrrltf lkesfsegnq aaedgrtltl
      841 assvrslhre kqtlsrllrk rfteeerekl ykkwgielns kqrrlqlvnq lwsnnkdmsh
      901 vkdsaaivak lirfveqgka lkemfglsft pphprrrsyg wknsmaslf
//
LOCUS       XP_040941952             949 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7F [Gossypium hirsutum].
ACCESSION   XP_040941952
VERSION     XP_040941952.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086018.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..949
                     /product="kinesin-like protein KIN-7F"
                     /calculated_mol_wt=106490
     Region          28..349
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(35,113,116,118..121,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          772..932
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..949
                     /gene="LOC107893789"
                     /coded_by="XM_041086018.1:243..3092"
                     /db_xref="GeneID:107893789"
ORIGIN      
        1 mgaiggeelk qvekeqkaqt agareerilv vvrlrplsdk eiianevadw ecindntily
       61 rntlregstf psaytfdrvf rgdcltkqvy eegakevals vvsginstif aygqtssgkt
      121 ytmtgiteyt vadifdyinr hkerafvlkf saieiyneai rdllssentq lklrddperg
      181 iivekvteev lrdwnhlkel laiceaqrki getslnerss rshqiirlti essareflgk
      241 ensttlaasv nfvdlagser asqslstgar lkegchinrs lltlstvirk lskgrqghin
      301 yrdskltril qpclggnart aiictlspar shveqtrntl lfaccakeva tkaqvnvvms
      361 dkalvkhlqr evarleselk spvpppsnsd yaallrrkdl qiqkmendir eltkqrdlaq
      421 srvedllsvi rndkhsgqsa rinyqpnqqe gdaweddysa sesscladsn rldvhvgkfn
      481 sihcsdtesg snieqpyhqp lnnhedhsms vsgqsldetl getaddpdey ckevqciete
      541 epardynsds rglpngeseg tlaltvygdg dgtdqeamst smngdreanh iqngiavdsl
      601 eqrlhhvqnt tdslvspdks spypqladls ssrslnlsrs lscradvmrg tsspyadrkh
      661 festppngwe kifpgrphgy gknfpllnyg anngvlsrnn sqsslgsasi ktsvdedits
      721 iqsfvagfkk qlangqiqst elevdesrks mkdvgldpmh dasstplhwp qeferlqrai
      781 lelwqacnvs lvhrtyffll fkgdpadsiy mevelrrltf lkesfsegnq aaedgrtltl
      841 assvrslhre kqtlsrllrk rfteeerekl ykkwgielns kqrrlqlvnq lwsnnkdmsh
      901 vkdsaaivak lirfveqgka lkemfglsft pphprrrsyg wknsmaslf
//
LOCUS       XP_040941953             949 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7F [Gossypium hirsutum].
ACCESSION   XP_040941953
VERSION     XP_040941953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086019.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..949
                     /product="kinesin-like protein KIN-7F"
                     /calculated_mol_wt=106490
     Region          28..349
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(35,113,116,118..121,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          772..932
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..949
                     /gene="LOC107893789"
                     /coded_by="XM_041086019.1:553..3402"
                     /db_xref="GeneID:107893789"
ORIGIN      
        1 mgaiggeelk qvekeqkaqt agareerilv vvrlrplsdk eiianevadw ecindntily
       61 rntlregstf psaytfdrvf rgdcltkqvy eegakevals vvsginstif aygqtssgkt
      121 ytmtgiteyt vadifdyinr hkerafvlkf saieiyneai rdllssentq lklrddperg
      181 iivekvteev lrdwnhlkel laiceaqrki getslnerss rshqiirlti essareflgk
      241 ensttlaasv nfvdlagser asqslstgar lkegchinrs lltlstvirk lskgrqghin
      301 yrdskltril qpclggnart aiictlspar shveqtrntl lfaccakeva tkaqvnvvms
      361 dkalvkhlqr evarleselk spvpppsnsd yaallrrkdl qiqkmendir eltkqrdlaq
      421 srvedllsvi rndkhsgqsa rinyqpnqqe gdaweddysa sesscladsn rldvhvgkfn
      481 sihcsdtesg snieqpyhqp lnnhedhsms vsgqsldetl getaddpdey ckevqciete
      541 epardynsds rglpngeseg tlaltvygdg dgtdqeamst smngdreanh iqngiavdsl
      601 eqrlhhvqnt tdslvspdks spypqladls ssrslnlsrs lscradvmrg tsspyadrkh
      661 festppngwe kifpgrphgy gknfpllnyg anngvlsrnn sqsslgsasi ktsvdedits
      721 iqsfvagfkk qlangqiqst elevdesrks mkdvgldpmh dasstplhwp qeferlqrai
      781 lelwqacnvs lvhrtyffll fkgdpadsiy mevelrrltf lkesfsegnq aaedgrtltl
      841 assvrslhre kqtlsrllrk rfteeerekl ykkwgielns kqrrlqlvnq lwsnnkdmsh
      901 vkdsaaivak lirfveqgka lkemfglsft pphprrrsyg wknsmaslf
//
LOCUS       XP_040941954             949 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7F [Gossypium hirsutum].
ACCESSION   XP_040941954
VERSION     XP_040941954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086020.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..949
                     /product="kinesin-like protein KIN-7F"
                     /calculated_mol_wt=106490
     Region          28..349
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(35,113,116,118..121,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          772..932
                     /region_name="DUF3490"
                     /note="Domain of unknown function (DUF3490); pfam11995"
                     /db_xref="CDD:463424"
     CDS             1..949
                     /gene="LOC107893789"
                     /coded_by="XM_041086020.1:186..3035"
                     /db_xref="GeneID:107893789"
ORIGIN      
        1 mgaiggeelk qvekeqkaqt agareerilv vvrlrplsdk eiianevadw ecindntily
       61 rntlregstf psaytfdrvf rgdcltkqvy eegakevals vvsginstif aygqtssgkt
      121 ytmtgiteyt vadifdyinr hkerafvlkf saieiyneai rdllssentq lklrddperg
      181 iivekvteev lrdwnhlkel laiceaqrki getslnerss rshqiirlti essareflgk
      241 ensttlaasv nfvdlagser asqslstgar lkegchinrs lltlstvirk lskgrqghin
      301 yrdskltril qpclggnart aiictlspar shveqtrntl lfaccakeva tkaqvnvvms
      361 dkalvkhlqr evarleselk spvpppsnsd yaallrrkdl qiqkmendir eltkqrdlaq
      421 srvedllsvi rndkhsgqsa rinyqpnqqe gdaweddysa sesscladsn rldvhvgkfn
      481 sihcsdtesg snieqpyhqp lnnhedhsms vsgqsldetl getaddpdey ckevqciete
      541 epardynsds rglpngeseg tlaltvygdg dgtdqeamst smngdreanh iqngiavdsl
      601 eqrlhhvqnt tdslvspdks spypqladls ssrslnlsrs lscradvmrg tsspyadrkh
      661 festppngwe kifpgrphgy gknfpllnyg anngvlsrnn sqsslgsasi ktsvdedits
      721 iqsfvagfkk qlangqiqst elevdesrks mkdvgldpmh dasstplhwp qeferlqrai
      781 lelwqacnvs lvhrtyffll fkgdpadsiy mevelrrltf lkesfsegnq aaedgrtltl
      841 assvrslhre kqtlsrllrk rfteeerekl ykkwgielns kqrrlqlvnq lwsnnkdmsh
      901 vkdsaaivak lirfveqgka lkemfglsft pphprrrsyg wknsmaslf
//
LOCUS       XP_040941955             261 aa            linear   PLN 06-AUG-2024
DEFINITION  clathrin light chain 2 [Gossypium hirsutum].
ACCESSION   XP_040941955
VERSION     XP_040941955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086021.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..261
                     /product="clathrin light chain 2"
                     /calculated_mol_wt=28835
     Region          <71..232
                     /region_name="Clathrin_lg_ch"
                     /note="Clathrin light chain; pfam01086"
                     /db_xref="CDD:460056"
     CDS             1..261
                     /gene="LOC121212704"
                     /coded_by="XM_041086021.1:181..966"
                     /db_xref="GeneID:121212704"
ORIGIN      
        1 mssfdddgyl gydprlashq lqsfdahsvk dsvadslpmf sdgtgddvfs sqsipetppi
       61 yssgggnsaf sseqngkgln gefggsdgpi lpppaemgpe egsglrewrr qnvirleeke
      121 kkeketleqi ikeaeeykve fyrkisiave nkkasnkdke kqclenrekf hagaeknywk
      181 aiaeliphev ptiekrgkkd kekkpsiivi qgpkpgkptd lsrmrqilvk lkhsppphlk
      241 pqmppppkva avtntetvfa a
//
LOCUS       XP_016716112             318 aa            linear   PLN 06-AUG-2024
DEFINITION  glycerol-3-phosphate 2-O-acyltransferase 6 [Gossypium hirsutum].
ACCESSION   XP_016716112
VERSION     XP_016716112.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860623.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016716112.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..318
                     /product="glycerol-3-phosphate 2-O-acyltransferase 6"
                     /calculated_mol_wt=35691
     Region          1..>307
                     /region_name="PLN02177"
                     /note="glycerol-3-phosphate acyltransferase"
                     /db_xref="CDD:215118"
     CDS             1..318
                     /gene="LOC107929252"
                     /coded_by="XM_016860623.2:338..1294"
                     /db_xref="GeneID:107929252"
ORIGIN      
        1 mvmgahrsfe piwkcrgegr snqtvvadln gtllvsrnpf pyfmlialea gslirafvll
       61 aslpfvylty lfisesaann afifisfvgl kirnielvsr svlpklyakd ihpetwrvfs
      121 sfgnryivta tprimvepfv ksilgadkvi gtelqvtksg ratgftlnpg ilvgehkraa
      181 ilkefgtrfp dlglgdretd hdfmslckqg ymvpitkcnt lprnkllsli ifleehlvqi
      241 rtllatlstl fwlpigfifs llrlyfnipl ikrialyick llriklvvkg nlplapkkgq
      301 itgllflfpt vvihfcld
//
LOCUS       XP_016675299             430 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 3 [Gossypium hirsutum].
ACCESSION   XP_016675299
VERSION     XP_016675299.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819810.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675299.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..430
                     /product="protein trichome birefringence-like 3"
                     /calculated_mol_wt=49138
     Region          90..143
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          144..429
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..430
                     /gene="LOC107894547"
                     /coded_by="XM_016819810.2:71..1363"
                     /db_xref="GeneID:107894547"
ORIGIN      
        1 msfaaspsai mmktykgklp lsvitvivca faflallytq sltflssnyi lkskscarrg
       61 avveandhrt aeenveilei ddrfefdpee cdigkgkwvf nrsikplytd tscpyldrqf
      121 scvkngrldf dyhhwewqpe dcdlprfnpe lalqklrgkr llfagdslqr nqwesfvcmv
      181 ewtippekks mkrgkvhsvf kakeynatie fywapflies ntdidvldpk krilkvdsva
      241 khskhwegad ilafntyvww msglrlktlw gsfangdegy aeldtavayq iglktwanwi
      301 dstlnpnktr vffttispih trseewgktd glkcfnetkp vkklwgsgsd kemmsvvagv
      361 lkkmkvavtv vnitqlseyr vdahssiyte tggrllndee kadpgrhadc ihwclpgvpd
      421 twnriflahl
//
LOCUS       XP_016677263             266 aa            linear   PLN 06-AUG-2024
DEFINITION  14-3-3-like protein GF14 iota [Gossypium hirsutum].
ACCESSION   XP_016677263
VERSION     XP_016677263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016821774.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..266
                     /product="14-3-3-like protein GF14 iota"
                     /calculated_mol_wt=30055
     Region          14..235
                     /region_name="14-3-3"
                     /note="14-3-3 protein; pfam00244"
                     /db_xref="CDD:459729"
     CDS             1..266
                     /gene="LOC107896576"
                     /coded_by="XM_016821774.2:82..882"
                     /db_xref="GeneID:107896576"
ORIGIN      
        1 msssekeret hvylaklaeq aeryeemves mkkvakldce ltveernlls vgyknvigar
       61 raswrimssi eqkeeskgne envklikgyr rkveeelsni ctdilstidk hlipssssge
      121 atvfyykmkg dyyryvaefk tdqerkeaae qslkgyeaas aaantdlpst hpirlglaln
      181 fsvfyyeimn sperachlak qafdeaisel dtlseesykd stlimqllrd nltlwtsdlp
      241 edggedtvkg ddtksvakse akaekh
//
LOCUS       XP_016729108             782 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase FERONIA [Gossypium hirsutum].
ACCESSION   XP_016729108
VERSION     XP_016729108.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873619.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729108.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..782
                     /product="receptor-like protein kinase FERONIA"
                     /calculated_mol_wt=87031
     Region          37..393
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          491..763
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(491..495,499,512,514,543,559..562,566,568,610,612,
                     614..615,617,628,631,651..654)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(491..495,499,512,514,543,559..562,566,610,612,
                     614..615,617,628)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(495,566,568,610,612,614,631,651..654)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(627..634,645..646,649..654)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..782
                     /gene="LOC107940185"
                     /coded_by="XM_016873619.2:239..2587"
                     /db_xref="GeneID:107940185"
ORIGIN      
        1 mkkitnsnps wpslvsllll sflfnswtcl aidqvildcg fagnssfngk twvgdatffp
       61 aysfhagtti gnvvsnetge vpvnpystar ffpssftysf pmspglkfir lhfyptsysg
      121 irkiseaefs vtagdytlln sfkpsvmatt lkspyvtkdy ffnlkkpivn itfapsleds
      181 dsfafvngie iysmplklsd ygvngtssna teilyrinvg vnsqnepfwn glddqylqgs
      241 ingtlieayd dhidynkspw tlseygapwd lyskartigg sdeaanmgyn ltwtfsidsg
      301 fsyivrlhfc eiqlfvtevn qrvfkvyinn ktvessldiv amaggplvam hkdytitvpe
      361 skggtelwla lqpnvdsnpk ladvilngie imklsdtrnn laahvlqven edrsgsipts
      421 niflgmvigl vvgisavsli aymlshwfll rydvnvrkas slicksseys rkfpleeika
      481 atnnfsearl lgyggfgkvy egllddgitk vavkrknpes nqglqefkte vellssfrhm
      541 nivsllgyce eeselilvyd ymangtlrdh lyqtqnppls wtrrlkicig aarglhylht
      601 gtehsiihrd ikstnilldq ewvakvsdfg lskvgkisgs nrsqispgpk gtfgyldpey
      661 grnrtltrks dvysfgvvlf evlcarpavn pepneddqtk vslarwalhc ygsekidlli
      721 epylrgkiks eclvtfveia vrclasrqmd rpsisdvlgk leqalvlqen avddlnvqik
      781 da
//
LOCUS       XP_016674366             570 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ARI8 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674366
VERSION     XP_016674366.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818877.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674366.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..570
                     /product="probable E3 ubiquitin-protein ligase ARI8
                     isoform X1"
                     /calculated_mol_wt=64803
     Region          139..200
                     /region_name="RING-HC_ARI6-like"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana protein ariadne homolog 6 (ARI6) and similar
                     proteins; cd23141"
                     /db_xref="CDD:438503"
     Region          218..282
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          296..350
                     /region_name="Rcat_RBR_ARI7-like"
                     /note="Rcat domain found in E3 ubiquitin-protein ligase
                     ARI7 and similar proteins; cd22583"
                     /db_xref="CDD:439034"
     Region          360..>521
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..570
                     /gene="LOC107893787"
                     /coded_by="XM_016818877.2:400..2112"
                     /db_xref="GeneID:107893787"
ORIGIN      
        1 meseddfdmh danesgeddf ysgrdddaga matyddsdad dadyefidnd sddsvdyvsh
       61 shqqnytils evdirqrqed ditristvls iskveagill ryyswnvskv hdewfadeek
      121 vrrsvgllek pvvpfpdgem icgicfetyp ydllraaacg hpfcnscwsg yistaisdgp
      181 gclmlrcpdp scvaavgqdm isalasdedq ekysryfirs yvednrktkw cpapgcdyav
      241 dfifgsgnyd vtcrcsysfc wncteeahrp vdcdtvakwi lknsaesenm nwilanskpc
      301 pkckrpiekn hgcmhmtctp pcrfefcwlc lgawsehgev tggyyacnry etakkegtfd
      361 eeekrremak lsvekythyy erwatnqssr qkaladlqqm qsvhleklse tqcqpesqlk
      421 fiteawlqii ecrrvlkwty aygyylpene hakrhffeyl qgeaesgler lhqcaekelq
      481 vylnaeeqlk dfnefrskla gltsvtrnff enlvraleng lsdvnsrgac srmgsskslg
      541 sgssrgrtgk gkgstprssg snrniddsgh
//
LOCUS       XP_040941956             554 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ARI8 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040941956
VERSION     XP_040941956.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086022.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..554
                     /product="probable E3 ubiquitin-protein ligase ARI8
                     isoform X2"
                     /calculated_mol_wt=62981
     Region          139..200
                     /region_name="RING-HC_ARI6-like"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana protein ariadne homolog 6 (ARI6) and similar
                     proteins; cd23141"
                     /db_xref="CDD:438503"
     Region          218..282
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          296..350
                     /region_name="Rcat_RBR_ARI7-like"
                     /note="Rcat domain found in E3 ubiquitin-protein ligase
                     ARI7 and similar proteins; cd22583"
                     /db_xref="CDD:439034"
     Region          360..>505
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..554
                     /gene="LOC107893787"
                     /coded_by="XM_041086022.1:400..2064"
                     /db_xref="GeneID:107893787"
ORIGIN      
        1 meseddfdmh danesgeddf ysgrdddaga matyddsdad dadyefidnd sddsvdyvsh
       61 shqqnytils evdirqrqed ditristvls iskveagill ryyswnvskv hdewfadeek
      121 vrrsvgllek pvvpfpdgem icgicfetyp ydllraaacg hpfcnscwsg yistaisdgp
      181 gclmlrcpdp scvaavgqdm isalasdedq ekysryfirs yvednrktkw cpapgcdyav
      241 dfifgsgnyd vtcrcsysfc wncteeahrp vdcdtvakwi lknsaesenm nwilanskpc
      301 pkckrpiekn hgcmhmtctp pcrfefcwlc lgawsehgev tggyyacnry etakkegtfd
      361 eeekrremak lsvekythyy erwatnqsle klsetqcqpe sqlkfiteaw lqiiecrrvl
      421 kwtyaygyyl penehakrhf feylqgeaes glerlhqcae kelqvylnae eqlkdfnefr
      481 sklagltsvt rnffenlvra lenglsdvns rgacsrmgss kslgsgssrg rtgkgkgstp
      541 rssgsnrnid dsgh
//
LOCUS       XP_016675297             240 aa            linear   PLN 06-AUG-2024
DEFINITION  cytosolic sulfotransferase 5 [Gossypium hirsutum].
ACCESSION   XP_016675297
VERSION     XP_016675297.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819808.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675297.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..240
                     /product="cytosolic sulfotransferase 5"
                     /calculated_mol_wt=27533
     Region          <2..238
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..240
                     /gene="LOC107894545"
                     /coded_by="XM_016819808.2:493..1215"
                     /db_xref="GeneID:107894545"
ORIGIN      
        1 mnrvqypntd nnhpllsenp hilvpfleyg lyidsqvpnf ttftsprlfa thlplvslpe
       61 satnsscklv ylcrnpkdtf vslwhftnkl rtkdmgsnsl evtfdkfirg vslygpfwdh
      121 vlgywkesle npervlflky eemkeqpklq lmklaqflgc pfsneeetrg avdgiqklcs
      181 fenlsnldvn ktgklasgee ykaffrrgev gdaknhltpq miqkldqite qklhgyglkf
//
LOCUS       XP_016675638             505 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675638
VERSION     XP_016675638.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820149.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55718
     CDS             1..505
                     /gene="LOC107894985"
                     /coded_by="XM_016820149.2:478..1995"
                     /db_xref="GeneID:107894985"
ORIGIN      
        1 mkldneqvic hstigyknds kpysflvdtk pfenkekssd atelstddtv kenqngvmhd
       61 iksdeldsdf siysentrde wtaseldcsn svhdfsngne kevrdivtfn shssknmdsf
      121 qdsvfyldks vmdcelpelv vcykestyhv vkdicidegv ptqdmflfes svdeksecnf
      181 sypkkdqdne lmkemsetdi pmqnisfsle enqsgkdidn dcgsnkklna dthmqdials
      241 leenksnkgi pnewdprdll vtrdmkddam emmsnegske lfilgdilsl pelttlksea
      301 mspdcksdrn eqqsfenssk kevivaseve dsnnlilsap alastaegsd sgkgeatpis
      361 papasaslea tssglvnetg sitfdsrssa ttsgkgssep letgrtskle etadqpfssn
      421 lqsgngessf saagpltgli sysgpitysg nlslrsdsst tstrsfafpi lqsewnsspv
      481 rmakadqrqy rrhrgwrqgf lccrf
//
LOCUS       XP_040941958             505 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941958
VERSION     XP_040941958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086024.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55718
     CDS             1..505
                     /gene="LOC107894985"
                     /coded_by="XM_041086024.1:206..1723"
                     /db_xref="GeneID:107894985"
ORIGIN      
        1 mkldneqvic hstigyknds kpysflvdtk pfenkekssd atelstddtv kenqngvmhd
       61 iksdeldsdf siysentrde wtaseldcsn svhdfsngne kevrdivtfn shssknmdsf
      121 qdsvfyldks vmdcelpelv vcykestyhv vkdicidegv ptqdmflfes svdeksecnf
      181 sypkkdqdne lmkemsetdi pmqnisfsle enqsgkdidn dcgsnkklna dthmqdials
      241 leenksnkgi pnewdprdll vtrdmkddam emmsnegske lfilgdilsl pelttlksea
      301 mspdcksdrn eqqsfenssk kevivaseve dsnnlilsap alastaegsd sgkgeatpis
      361 papasaslea tssglvnetg sitfdsrssa ttsgkgssep letgrtskle etadqpfssn
      421 lqsgngessf saagpltgli sysgpitysg nlslrsdsst tstrsfafpi lqsewnsspv
      481 rmakadqrqy rrhrgwrqgf lccrf
//
LOCUS       XP_016675640             505 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675640
VERSION     XP_016675640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820151.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55718
     CDS             1..505
                     /gene="LOC107894985"
                     /coded_by="XM_016820151.2:432..1949"
                     /db_xref="GeneID:107894985"
ORIGIN      
        1 mkldneqvic hstigyknds kpysflvdtk pfenkekssd atelstddtv kenqngvmhd
       61 iksdeldsdf siysentrde wtaseldcsn svhdfsngne kevrdivtfn shssknmdsf
      121 qdsvfyldks vmdcelpelv vcykestyhv vkdicidegv ptqdmflfes svdeksecnf
      181 sypkkdqdne lmkemsetdi pmqnisfsle enqsgkdidn dcgsnkklna dthmqdials
      241 leenksnkgi pnewdprdll vtrdmkddam emmsnegske lfilgdilsl pelttlksea
      301 mspdcksdrn eqqsfenssk kevivaseve dsnnlilsap alastaegsd sgkgeatpis
      361 papasaslea tssglvnetg sitfdsrssa ttsgkgssep letgrtskle etadqpfssn
      421 lqsgngessf saagpltgli sysgpitysg nlslrsdsst tstrsfafpi lqsewnsspv
      481 rmakadqrqy rrhrgwrqgf lccrf
//
LOCUS       XP_016675641             505 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675641
VERSION     XP_016675641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820152.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55718
     CDS             1..505
                     /gene="LOC107894985"
                     /coded_by="XM_016820152.2:410..1927"
                     /db_xref="GeneID:107894985"
ORIGIN      
        1 mkldneqvic hstigyknds kpysflvdtk pfenkekssd atelstddtv kenqngvmhd
       61 iksdeldsdf siysentrde wtaseldcsn svhdfsngne kevrdivtfn shssknmdsf
      121 qdsvfyldks vmdcelpelv vcykestyhv vkdicidegv ptqdmflfes svdeksecnf
      181 sypkkdqdne lmkemsetdi pmqnisfsle enqsgkdidn dcgsnkklna dthmqdials
      241 leenksnkgi pnewdprdll vtrdmkddam emmsnegske lfilgdilsl pelttlksea
      301 mspdcksdrn eqqsfenssk kevivaseve dsnnlilsap alastaegsd sgkgeatpis
      361 papasaslea tssglvnetg sitfdsrssa ttsgkgssep letgrtskle etadqpfssn
      421 lqsgngessf saagpltgli sysgpitysg nlslrsdsst tstrsfafpi lqsewnsspv
      481 rmakadqrqy rrhrgwrqgf lccrf
//
LOCUS       XP_016675642             505 aa            linear   PLN 06-AUG-2024
DEFINITION  rhamnogalacturonan I rhamnosyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016675642
VERSION     XP_016675642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820153.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="rhamnogalacturonan I rhamnosyltransferase 1"
                     /calculated_mol_wt=57373
     Region          103..427
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(111..114,270,272,346..348,390,409..411)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..505
                     /gene="LOC107894987"
                     /coded_by="XM_016820153.2:154..1671"
                     /db_xref="GeneID:107894987"
ORIGIN      
        1 mgfsearfee tegremkekp ysnkmslkyi smakaeklks lilarirvar lnlwvtrals
       61 mllllgitmq lkslgetvss srtptstfsy plppervyen ngylmvssng glnqmrsgic
      121 dmvtvarfln vtlivpeldn tsfwnddsqf adifdveyfi aslrdevril kelppqqkgk
      181 vaeslfsmpp iswsnmtyyy nvilpriqtt evvhfqktda rlannglpve vqklrcrvny
      241 ealrfappiq alaekivril rdkgpflvlh lryemdmiaf sgcnegcneq eideltkmry
      301 aypwwkekvi dsaqkrlagl cpltpeeial tlqalgidhn iqvyiaagdi yggerrlatl
      361 raaypnlvkk etllpsseld pfrnhsnqma aldyyvavqs etfvptnggn makvveghrr
      421 ylgfkktill nrkavvdlvd lykagsiswd kfssemkkah adrignpaer lvipgkpkee
      481 dyfytnpeec lasfdepqls nddhq
//
LOCUS       XP_016675643             326 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor BIM2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675643
VERSION     XP_016675643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820154.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="transcription factor BIM2 isoform X1"
                     /calculated_mol_wt=36260
     Region          52..128
                     /region_name="bHLH_AtBIM_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BES1-interacting Myc-like proteins
                     (BIMs) and similar proteins; cd11453"
                     /db_xref="CDD:381459"
     Site            order(58..59,62..63,65..66,70,88..89)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381459"
     Site            order(68..69,72,75..76,79,89..90,93..94,97,100,103..104,
                     107,110..111,113..114,117,120..121,124,127..128)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381459"
     CDS             1..326
                     /gene="LOC107894988"
                     /coded_by="XM_016820154.2:236..1216"
                     /db_xref="GeneID:107894988"
ORIGIN      
        1 mrtgkgsqee eeydeeefgs kkggfssnqn msfnpnnnst tnkdgknndk anairskhsv
       61 teqrrrskin erfqrlrdli pntdqkrdta sfllevieyv qylqekvqky edsyqgwsse
      121 paklmpwrns hwhvqslvgh pqaikkgsgp gatfarklde nntninptvi tslpnavetd
      181 piryvtsktm dcqtelansg thlpiqgenv lvhplqrpvs etqsteclvg ndipinqqed
      241 ltieggtisi ssvysqglls alaqalqclg ldlsqanmlv qidlgkhanr glsakephns
      301 phqamthlrd vssgedsdha qkrlkk
//
LOCUS       XP_016675644             317 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor BIM2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675644
VERSION     XP_016675644.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820155.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..317
                     /product="transcription factor BIM2 isoform X2"
                     /calculated_mol_wt=35124
     Region          52..119
                     /region_name="bHLH_AtBIM_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BES1-interacting Myc-like proteins
                     (BIMs) and similar proteins; cd11453"
                     /db_xref="CDD:381459"
     Site            order(58..59,62..63,65..66,70,88..89)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381459"
     Site            order(68..69,72,75..76,79,89..90,93..94,98,101..102,
                     104..105,108,111..112,115,118..119)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381459"
     CDS             1..317
                     /gene="LOC107894988"
                     /coded_by="XM_016820155.2:237..1190"
                     /db_xref="GeneID:107894988"
ORIGIN      
        1 mrtgkgsqee eeydeeefgs kkggfssnqn msfnpnnnst tnkdgknndk anairskhsv
       61 teqrrrskin erfqrlrdli pntdqkrdta sflleekvqk yedsyqgwss epaklmpwrn
      121 shwhvqslvg hpqaikkgsg pgatfarkld enntninptv itslpnavet dpiryvtskt
      181 mdcqtelans gthlpiqgen vlvhplqrpv setqsteclv gndipinqqe dltieggtis
      241 issvysqgll salaqalqcl gldlsqanml vqidlgkhan rglsakephn sphqamthlr
      301 dvssgedsdh aqkrlkk
//
LOCUS       XP_016675645             641 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-kinase gamma 5 [Gossypium hirsutum].
ACCESSION   XP_016675645
VERSION     XP_016675645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..641
                     /product="phosphatidylinositol 4-kinase gamma 5"
                     /calculated_mol_wt=72141
     Region          43..>93
                     /region_name="Ubl_ubiquitin_like"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin and
                     ubiquitin-like Ubl proteins; cd17039"
                     /db_xref="CDD:340559"
     Region          170..420
                     /region_name="PI3_PI4_kinase"
                     /note="Phosphatidylinositol 3- and 4-kinase; pfam00454"
                     /db_xref="CDD:395364"
     CDS             1..641
                     /gene="LOC107894990"
                     /coded_by="XM_016820156.2:692..2617"
                     /db_xref="GeneID:107894990"
ORIGIN      
        1 msrkldslvq tqmavavfks plrgeyprnn rmegkqpvgr rrvfvqtetg cvlgmeldrs
       61 dsahtvkrrl qvalnfpaeq ssltfgdvel kndlsavrnd spllltrnyl hrssstpcls
      121 ptgkdlqqrd ksgpieilgh sdsfnvlkvv vkdivkaikm gvdplpvhsg lggayyfrnp
      181 rgenvaivkp tdeepfapnn pkgfvgkalg qpglkrsvrv getgfrevva ylldhdyfan
      241 vpptalvkit hsvfninggv nrnrphknlv skiascqqfi rhdfdasdhg tssfpvtsvh
      301 rigildirif ntdrhagnll vrkldgigrf gqmelipidh glclpetled pyfewihwpq
      361 asipfsedel eyiqkldpmk dcemlrrelp mireaclrvl vlctiflkea aafglclaei
      421 gemmsrefra geeepselev iclearrlia erelsspksd vrdaefqfdi dfeepesdln
      481 pkmatddfms rapfqlgngf vsnhfplskl eecfeedeee seeeteqlcf stfkalgrip
      541 stsklsmsfk ntslgdksqk yskfsgtkqe ngylnnssgh rsateqlpgn vsfvkladmn
      601 eeewtlflek fqellypgfe krksvtlgqk qiqrlgtscq f
//
LOCUS       XP_016675447             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675447
VERSION     XP_016675447.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819958.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..144
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15503
     CDS             1..144
                     /gene="LOC107894711"
                     /coded_by="XM_016819958.2:139..573"
                     /db_xref="GeneID:107894711"
ORIGIN      
        1 maaeriitcl silllfaali siaqaiqdgi pdsnhmtvpt rkgllkggne haasvtaain
       61 kkwlrgrkmv qmkklndven msgafglggs tsklskcgnn nnnnnkgcdq itvnlpdevd
      121 ehrsgfvafn adyhtprhhp pknn
//
LOCUS       XP_016675646            1127 aa            linear   PLN 06-AUG-2024
DEFINITION  putative U-box domain-containing protein 42 [Gossypium hirsutum].
ACCESSION   XP_016675646
VERSION     XP_016675646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820157.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1127
                     /product="putative U-box domain-containing protein 42"
                     /calculated_mol_wt=125813
     Site            order(339,342,344..347,366,370,383)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          341..407
                     /region_name="Ubox"
                     /note="Modified RING finger domain; smart00504"
                     /db_xref="CDD:128780"
     Region          624..654
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          663..696
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1127
                     /gene="LOC107894993"
                     /coded_by="XM_016820157.2:300..3683"
                     /db_xref="GeneID:107894993"
ORIGIN      
        1 msivntafag lfeslladit vvtesvecie veqesffeag cylyrvfpvi melkytektp
       61 knakqileti sqnvnlakdl vgdcdknnqp vsdselgsii gqlegvikdi geslclipsa
      121 tfggegyaet avrslseelq nvhfkvkrpq elrtkelepq msfaaeqhkk skmatessqm
      181 pqltqnvhie vkqpqpqelr tkelkpqtsf atephkkskm eigssempql mqnvhievkq
      241 pedlrtkele pqmsfakeph kkskmatess hmpqlmpmds dlysvnvevs vstessqasn
      301 mpclndflki tnqksqnenv nkslstlpqv ahyiepmydt ffcpltkqim ddpvtiesgv
      361 tyerkaimew fetfshledi icpttgmklt srvlstnval kttieqwkdr neaarikvar
      421 valslassdn mileaitdlq hickrnqnnk vqvlsvgilp llikligykn rdvrcgalel
      481 llqlaeedne gkemianamd lstllallss shqsvrhasl llllelsrgq algekigsat
      541 gaililirik ynhqvdhfas qkadeilknl erfrdnikqm aeygfldpll nhltvgskev
      601 qmemasylge iilgndskty vaeraspslf kmvqsgntii rkaafkalaq isshhpnari
      661 lveagivqim aeemfarriy depmnskkea aailaniles gvehdsiqvn phghrissdy
      721 vvyniicmlk nstaheldin lirillcltk spksmativs vvneteasyt lielintqhe
      781 qlgiaaikll itlashvgnt laerlcktrg qpesliesqt etnhitekqa vsakflaklp
      841 qqnltlnlal lhknvvptil qriiliqrsg irtsrhatvy leglvgilvr ftttlyepqi
      901 lflakahnlt svftelltkt ssdevqrlsa tgleklslet vklskppkik ktkltnlfhl
      961 pkllssslsk rrkipllcpv hrgvcssett fclidanaie rllacldhen nevveaslaa
     1021 ictllddnvd vhmsvsllse vnaiqhilnv vkehrqeglw qksfwmiekf lvkggnksas
     1081 disqdrllpa slvsafhhgn gstrqiaeni lrhlnrmpnt stsyytm
//
LOCUS       XP_040941959             555 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 [Gossypium hirsutum].
ACCESSION   XP_040941959
VERSION     XP_040941959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086025.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="transcription factor bHLH49"
                     /calculated_mol_wt=59020
     Region          207..>373
                     /region_name="PTZ00459"
                     /note="mucin-associated surface protein (MASP);
                     Provisional"
                     /db_xref="CDD:185638"
     Region          359..444
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(374..375,378..379,381..382,386,404..405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(384..385,388,391..392,395,405..406,409..410,413,416,
                     419..420,423,426..427,429..430,433,436..437,440,443..444)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..555
                     /gene="LOC107894995"
                     /coded_by="XM_041086025.1:1259..2926"
                     /db_xref="GeneID:107894995"
ORIGIN      
        1 mdvgekdkye lekrndnsln yqtsgmssaw qfggsnltst pmslvssdnp lvigsssasa
       61 smgdsfcsnl wehpsnsqnl gfceinvqng asssnamgig rggpasvrss idrpfemgwn
      121 aassmlkggi flpnasgvlp sslsqlqtds afieraakfs sfnggnfsdi vnpfgipeam
      181 gvyargvglm qgpqdvytis gvksisgves qrsklmttea srdlqaenra tqesplkner
      241 nsgslvrsne eakqgnggsg nesneaessg gagghdepsa ldgtagessa kvlsskkrkr
      301 ivqeaevdqa kgsqspveaa kdgaenqqkg dqnqttmvnk ttakhgkqgs qasdppkeey
      361 ihvrarrgqa tnshslaerv rrekisermk flqdlvpgcn kvtgkavmld eiinyvqslq
      421 rqveflsmkl atvnprvdcn iegllakdii qsragpstlg fspdlsvgyp plhpsqpglc
      481 pggfpvmgnn adiirrtlss hftpmtggfk epnqlsnawe delhnvvqmn ygtstasdsq
      541 evngsqpsgh tkvel
//
LOCUS       XP_016675649             555 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 [Gossypium hirsutum].
ACCESSION   XP_016675649
VERSION     XP_016675649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="transcription factor bHLH49"
                     /calculated_mol_wt=59020
     Region          207..>373
                     /region_name="PTZ00459"
                     /note="mucin-associated surface protein (MASP);
                     Provisional"
                     /db_xref="CDD:185638"
     Region          359..444
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(374..375,378..379,381..382,386,404..405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(384..385,388,391..392,395,405..406,409..410,413,416,
                     419..420,423,426..427,429..430,433,436..437,440,443..444)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..555
                     /gene="LOC107894995"
                     /coded_by="XM_016820160.2:570..2237"
                     /db_xref="GeneID:107894995"
ORIGIN      
        1 mdvgekdkye lekrndnsln yqtsgmssaw qfggsnltst pmslvssdnp lvigsssasa
       61 smgdsfcsnl wehpsnsqnl gfceinvqng asssnamgig rggpasvrss idrpfemgwn
      121 aassmlkggi flpnasgvlp sslsqlqtds afieraakfs sfnggnfsdi vnpfgipeam
      181 gvyargvglm qgpqdvytis gvksisgves qrsklmttea srdlqaenra tqesplkner
      241 nsgslvrsne eakqgnggsg nesneaessg gagghdepsa ldgtagessa kvlsskkrkr
      301 ivqeaevdqa kgsqspveaa kdgaenqqkg dqnqttmvnk ttakhgkqgs qasdppkeey
      361 ihvrarrgqa tnshslaerv rrekisermk flqdlvpgcn kvtgkavmld eiinyvqslq
      421 rqveflsmkl atvnprvdcn iegllakdii qsragpstlg fspdlsvgyp plhpsqpglc
      481 pggfpvmgnn adiirrtlss hftpmtggfk epnqlsnawe delhnvvqmn ygtstasdsq
      541 evngsqpsgh tkvel
//
LOCUS       XP_016675650             555 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 [Gossypium hirsutum].
ACCESSION   XP_016675650
VERSION     XP_016675650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="transcription factor bHLH49"
                     /calculated_mol_wt=59020
     Region          207..>373
                     /region_name="PTZ00459"
                     /note="mucin-associated surface protein (MASP);
                     Provisional"
                     /db_xref="CDD:185638"
     Region          359..444
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(374..375,378..379,381..382,386,404..405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(384..385,388,391..392,395,405..406,409..410,413,416,
                     419..420,423,426..427,429..430,433,436..437,440,443..444)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..555
                     /gene="LOC107894995"
                     /coded_by="XM_016820161.2:547..2214"
                     /db_xref="GeneID:107894995"
ORIGIN      
        1 mdvgekdkye lekrndnsln yqtsgmssaw qfggsnltst pmslvssdnp lvigsssasa
       61 smgdsfcsnl wehpsnsqnl gfceinvqng asssnamgig rggpasvrss idrpfemgwn
      121 aassmlkggi flpnasgvlp sslsqlqtds afieraakfs sfnggnfsdi vnpfgipeam
      181 gvyargvglm qgpqdvytis gvksisgves qrsklmttea srdlqaenra tqesplkner
      241 nsgslvrsne eakqgnggsg nesneaessg gagghdepsa ldgtagessa kvlsskkrkr
      301 ivqeaevdqa kgsqspveaa kdgaenqqkg dqnqttmvnk ttakhgkqgs qasdppkeey
      361 ihvrarrgqa tnshslaerv rrekisermk flqdlvpgcn kvtgkavmld eiinyvqslq
      421 rqveflsmkl atvnprvdcn iegllakdii qsragpstlg fspdlsvgyp plhpsqpglc
      481 pggfpvmgnn adiirrtlss hftpmtggfk epnqlsnawe delhnvvqmn ygtstasdsq
      541 evngsqpsgh tkvel
//
LOCUS       XP_016675652             555 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 [Gossypium hirsutum].
ACCESSION   XP_016675652
VERSION     XP_016675652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="transcription factor bHLH49"
                     /calculated_mol_wt=59020
     Region          207..>373
                     /region_name="PTZ00459"
                     /note="mucin-associated surface protein (MASP);
                     Provisional"
                     /db_xref="CDD:185638"
     Region          359..444
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(374..375,378..379,381..382,386,404..405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(384..385,388,391..392,395,405..406,409..410,413,416,
                     419..420,423,426..427,429..430,433,436..437,440,443..444)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..555
                     /gene="LOC107894995"
                     /coded_by="XM_016820163.2:593..2260"
                     /db_xref="GeneID:107894995"
ORIGIN      
        1 mdvgekdkye lekrndnsln yqtsgmssaw qfggsnltst pmslvssdnp lvigsssasa
       61 smgdsfcsnl wehpsnsqnl gfceinvqng asssnamgig rggpasvrss idrpfemgwn
      121 aassmlkggi flpnasgvlp sslsqlqtds afieraakfs sfnggnfsdi vnpfgipeam
      181 gvyargvglm qgpqdvytis gvksisgves qrsklmttea srdlqaenra tqesplkner
      241 nsgslvrsne eakqgnggsg nesneaessg gagghdepsa ldgtagessa kvlsskkrkr
      301 ivqeaevdqa kgsqspveaa kdgaenqqkg dqnqttmvnk ttakhgkqgs qasdppkeey
      361 ihvrarrgqa tnshslaerv rrekisermk flqdlvpgcn kvtgkavmld eiinyvqslq
      421 rqveflsmkl atvnprvdcn iegllakdii qsragpstlg fspdlsvgyp plhpsqpglc
      481 pggfpvmgnn adiirrtlss hftpmtggfk epnqlsnawe delhnvvqmn ygtstasdsq
      541 evngsqpsgh tkvel
//
LOCUS       XP_040941960             555 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 [Gossypium hirsutum].
ACCESSION   XP_040941960
VERSION     XP_040941960.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086026.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="transcription factor bHLH49"
                     /calculated_mol_wt=59020
     Region          207..>373
                     /region_name="PTZ00459"
                     /note="mucin-associated surface protein (MASP);
                     Provisional"
                     /db_xref="CDD:185638"
     Region          359..444
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(374..375,378..379,381..382,386,404..405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(384..385,388,391..392,395,405..406,409..410,413,416,
                     419..420,423,426..427,429..430,433,436..437,440,443..444)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..555
                     /gene="LOC107894995"
                     /coded_by="XM_041086026.1:360..2027"
                     /db_xref="GeneID:107894995"
ORIGIN      
        1 mdvgekdkye lekrndnsln yqtsgmssaw qfggsnltst pmslvssdnp lvigsssasa
       61 smgdsfcsnl wehpsnsqnl gfceinvqng asssnamgig rggpasvrss idrpfemgwn
      121 aassmlkggi flpnasgvlp sslsqlqtds afieraakfs sfnggnfsdi vnpfgipeam
      181 gvyargvglm qgpqdvytis gvksisgves qrsklmttea srdlqaenra tqesplkner
      241 nsgslvrsne eakqgnggsg nesneaessg gagghdepsa ldgtagessa kvlsskkrkr
      301 ivqeaevdqa kgsqspveaa kdgaenqqkg dqnqttmvnk ttakhgkqgs qasdppkeey
      361 ihvrarrgqa tnshslaerv rrekisermk flqdlvpgcn kvtgkavmld eiinyvqslq
      421 rqveflsmkl atvnprvdcn iegllakdii qsragpstlg fspdlsvgyp plhpsqpglc
      481 pggfpvmgnn adiirrtlss hftpmtggfk epnqlsnawe delhnvvqmn ygtstasdsq
      541 evngsqpsgh tkvel
//
LOCUS       XP_016675651             555 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 [Gossypium hirsutum].
ACCESSION   XP_016675651
VERSION     XP_016675651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820162.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..555
                     /product="transcription factor bHLH49"
                     /calculated_mol_wt=59020
     Region          207..>373
                     /region_name="PTZ00459"
                     /note="mucin-associated surface protein (MASP);
                     Provisional"
                     /db_xref="CDD:185638"
     Region          359..444
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(374..375,378..379,381..382,386,404..405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(384..385,388,391..392,395,405..406,409..410,413,416,
                     419..420,423,426..427,429..430,433,436..437,440,443..444)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..555
                     /gene="LOC107894995"
                     /coded_by="XM_016820162.2:609..2276"
                     /db_xref="GeneID:107894995"
ORIGIN      
        1 mdvgekdkye lekrndnsln yqtsgmssaw qfggsnltst pmslvssdnp lvigsssasa
       61 smgdsfcsnl wehpsnsqnl gfceinvqng asssnamgig rggpasvrss idrpfemgwn
      121 aassmlkggi flpnasgvlp sslsqlqtds afieraakfs sfnggnfsdi vnpfgipeam
      181 gvyargvglm qgpqdvytis gvksisgves qrsklmttea srdlqaenra tqesplkner
      241 nsgslvrsne eakqgnggsg nesneaessg gagghdepsa ldgtagessa kvlsskkrkr
      301 ivqeaevdqa kgsqspveaa kdgaenqqkg dqnqttmvnk ttakhgkqgs qasdppkeey
      361 ihvrarrgqa tnshslaerv rrekisermk flqdlvpgcn kvtgkavmld eiinyvqslq
      421 rqveflsmkl atvnprvdcn iegllakdii qsragpstlg fspdlsvgyp plhpsqpglc
      481 pggfpvmgnn adiirrtlss hftpmtggfk epnqlsnawe delhnvvqmn ygtstasdsq
      541 evngsqpsgh tkvel
//
LOCUS       XP_040941961             189 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYLLO, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040941961
VERSION     XP_040941961.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086027.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..189
                     /product="protein PHYLLO, chloroplastic"
                     /calculated_mol_wt=21242
     Region          <1..176
                     /region_name="PLN02980"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding"
                     /db_xref="CDD:215530"
     CDS             1..189
                     /gene="LOC121212709"
                     /coded_by="XM_041086027.1:102..671"
                     /db_xref="GeneID:121212709"
ORIGIN      
        1 malkfsdkie gavilsgspg ledavarkir rakddskars ivthglqlfl ntwysgglwk
       61 slrshpyfnh ivvrrsvhdd lqglakvlsg lspgrqpslw edlkhckvpl mlvvgekdek
      121 fkrvaqkmwh eighdrddav sklhqmvvvp scghavhlen plpiirlvrq fmtslrsvkl
      181 qekgmleic
//
LOCUS       XP_040941962             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941962
VERSION     XP_040941962.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086028.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12016
     Region          1..>36
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..107
                     /gene="LOC107894721"
                     /coded_by="XM_041086028.1:646..969"
                     /db_xref="GeneID:107894721"
ORIGIN      
        1 msemeveeyr qkreimvegr dvpkpvksfa nvgfpdlasd laqitfdypf riplyfkpkf
       61 raigcwgsis tsrssismsl sqgvnvaqls rncfqccqay lpgffls
//
LOCUS       XP_016675453             100 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP2-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016675453
VERSION     XP_016675453.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819964.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..100
                     /product="ATP-dependent RNA helicase DBP2-like isoform X2"
                     /calculated_mol_wt=11088
     Region          1..>35
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..100
                     /gene="LOC107894721"
                     /coded_by="XM_016819964.2:1091..1393"
                     /db_xref="GeneID:107894721"
ORIGIN      
        1 msemeveeyr qkreimvegr dvpkpvksfa nvgfpgckcc sviqellpvl pgisawvlpe
       61 lifvgtfvgl qellfifvgi fnvttlfncv ytciadldii
//
LOCUS       XP_040941963              91 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941963
VERSION     XP_040941963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086029.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..91
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=10074
     CDS             1..91
                     /gene="LOC107894721"
                     /coded_by="XM_041086029.1:1181..1456"
                     /db_xref="GeneID:107894721"
ORIGIN      
        1 mwdfqgnwvl gfninvekfn invvksgckc csviqellpv lpgisawvlp elifvgtfvg
       61 lqellfifvg ifnvttlfnc vytciadldi i
//
LOCUS       XP_016674085             324 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 3 [Gossypium hirsutum].
ACCESSION   XP_016674085
VERSION     XP_016674085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818596.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="peroxidase 3"
                     /calculated_mol_wt=34762
     Region          23..322
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(53,56..57,59..60,63..64,93,95,159..162,168,172,182,
                     185..186,188..189,191..195,197..198,241,264,266,299)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(53,56..57,59..60,63,91,93,95,159..161,168,172,182,
                     185..186,188..189,191..195,198,241,264,266,299)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(60,89..90,159..162,195,197..198)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(65,68,72,74,190,242,245,248,250)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..324
                     /gene="LOC107893564"
                     /coded_by="XM_016818596.2:77..1051"
                     /db_xref="GeneID:107893564"
ORIGIN      
        1 magtsslgiv vvvlaligst qaqlqmyyyg tscpkaeqiv kdyvkqhipn apslaaallr
       61 mhfhdcfvrg cdaslllnst tgqaeknaip nlslrgfdfi drvkslleae cpsvvscadi
      121 ialaardsvv tiggpfwnvp tgrrdgvisn itealanips alsnfttlls qfnnlglntt
      181 dmvllsgght igishcpavs prlynstgpg gidptmdsey aenlkankck tasdnttile
      241 mdpgsrktfd lsyyslllkr rglfqsdaal ttdstslafi nqllssptqf ffdefgkame
      301 kmgrinvktg segeirrqca lvns
//
LOCUS       XP_016674234             210 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 2 [Gossypium hirsutum].
ACCESSION   XP_016674234
VERSION     XP_016674234.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818745.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674234.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..210
                     /product="probable 6-phosphogluconolactonase 2"
                     /calculated_mol_wt=23126
     Region          <1..210
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     CDS             1..210
                     /gene="LOC107893687"
                     /coded_by="XM_016818745.2:602..1234"
                     /db_xref="GeneID:107893687"
ORIGIN      
        1 mgklceapyn ktvdwakwyi fwadervvak nhsdsnykla kdgilskvpi vpshvhsind
       61 svsaeeaade ymfvirqlvk trmvsvsdis dcpkfdlill gmgpdghias lfpnhavlde
      121 teewvtfitd spkppperit ftlpvinsas nvaivvtges kaeavhlaid nvepncpslp
      181 arlvqptkgk lvwfldkpaa skldnlqfse
//
LOCUS       XP_016674235             210 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 2 [Gossypium hirsutum].
ACCESSION   XP_016674235
VERSION     XP_016674235.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818746.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674235.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..210
                     /product="probable 6-phosphogluconolactonase 2"
                     /calculated_mol_wt=23126
     Region          <1..210
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     CDS             1..210
                     /gene="LOC107893687"
                     /coded_by="XM_016818746.2:327..959"
                     /db_xref="GeneID:107893687"
ORIGIN      
        1 mgklceapyn ktvdwakwyi fwadervvak nhsdsnykla kdgilskvpi vpshvhsind
       61 svsaeeaade ymfvirqlvk trmvsvsdis dcpkfdlill gmgpdghias lfpnhavlde
      121 teewvtfitd spkppperit ftlpvinsas nvaivvtges kaeavhlaid nvepncpslp
      181 arlvqptkgk lvwfldkpaa skldnlqfse
//
LOCUS       XP_040941964             210 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 2 [Gossypium hirsutum].
ACCESSION   XP_040941964
VERSION     XP_040941964.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086030.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..210
                     /product="probable 6-phosphogluconolactonase 2"
                     /calculated_mol_wt=23126
     Region          <1..210
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     CDS             1..210
                     /gene="LOC107893687"
                     /coded_by="XM_041086030.1:478..1110"
                     /db_xref="GeneID:107893687"
ORIGIN      
        1 mgklceapyn ktvdwakwyi fwadervvak nhsdsnykla kdgilskvpi vpshvhsind
       61 svsaeeaade ymfvirqlvk trmvsvsdis dcpkfdlill gmgpdghias lfpnhavlde
      121 teewvtfitd spkppperit ftlpvinsas nvaivvtges kaeavhlaid nvepncpslp
      181 arlvqptkgk lvwfldkpaa skldnlqfse
//
LOCUS       XP_040941965             210 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 2 [Gossypium hirsutum].
ACCESSION   XP_040941965
VERSION     XP_040941965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086031.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..210
                     /product="probable 6-phosphogluconolactonase 2"
                     /calculated_mol_wt=23126
     Region          <1..210
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     CDS             1..210
                     /gene="LOC107893687"
                     /coded_by="XM_041086031.1:130..762"
                     /db_xref="GeneID:107893687"
ORIGIN      
        1 mgklceapyn ktvdwakwyi fwadervvak nhsdsnykla kdgilskvpi vpshvhsind
       61 svsaeeaade ymfvirqlvk trmvsvsdis dcpkfdlill gmgpdghias lfpnhavlde
      121 teewvtfitd spkppperit ftlpvinsas nvaivvtges kaeavhlaid nvepncpslp
      181 arlvqptkgk lvwfldkpaa skldnlqfse
//
LOCUS       XP_016674236             134 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b5 [Gossypium hirsutum].
ACCESSION   XP_016674236
VERSION     XP_016674236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818747.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="cytochrome b5"
                     /calculated_mol_wt=14754
     Region          <2..>85
                     /region_name="PLN02252"
                     /note="nitrate reductase [NADPH]"
                     /db_xref="CDD:215141"
     CDS             1..134
                     /gene="LOC107893688"
                     /coded_by="XM_016818747.2:154..558"
                     /db_xref="GeneID:107893688"
ORIGIN      
        1 mptltklytm qeaaqhntkd dcwividgkv ydvtsyldeh pggddvvles tgkdatddfe
       61 daghsksakv llqsfcigel dtsspiipel eisskkeavk yseklmdltk qywtipvaiv
      121 gisvvvgfly lhkk
//
LOCUS       XP_040941966             134 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b5 [Gossypium hirsutum].
ACCESSION   XP_040941966
VERSION     XP_040941966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086032.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..134
                     /product="cytochrome b5"
                     /calculated_mol_wt=14754
     Region          <2..>85
                     /region_name="PLN02252"
                     /note="nitrate reductase [NADPH]"
                     /db_xref="CDD:215141"
     CDS             1..134
                     /gene="LOC107893688"
                     /coded_by="XM_041086032.1:238..642"
                     /db_xref="GeneID:107893688"
ORIGIN      
        1 mptltklytm qeaaqhntkd dcwividgkv ydvtsyldeh pggddvvles tgkdatddfe
       61 daghsksakv llqsfcigel dtsspiipel eisskkeavk yseklmdltk qywtipvaiv
      121 gisvvvgfly lhkk
//
LOCUS       XP_016674527             303 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674527
VERSION     XP_016674527.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..303
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34499
     Region          146..256
                     /region_name="Sm_like"
                     /note="Sm and related proteins; cl00259"
                     /db_xref="CDD:469694"
     CDS             1..303
                     /gene="LOC107893897"
                     /coded_by="XM_016819038.2:103..1014"
                     /db_xref="GeneID:107893897"
ORIGIN      
        1 msnsriifrs vlrssrrpsl gfaasslssa rfsplplpta lnppppfelk sissftssft
       61 rrlfhntasv hnknenhqqe eeelrfygta eddgeftdew eeedetvepk vgdggdgggi
      121 vlqglpwges alsiahdalk lfsddiklya fkttprgyiy vrldklsdey gcpsmeelqs
      181 ysqeykkrld eagerreipd dlalqvsspg aerilkvpdd ldrfkdmamr vcyiedagsn
      241 yteksgvfll dsveeencvw klaevkenrd pnskgrpfsr kqkdwrlklp fdkhkmimly
      301 ley
//
LOCUS       XP_040941967             303 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941967
VERSION     XP_040941967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086033.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..303
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34499
     Region          146..256
                     /region_name="Sm_like"
                     /note="Sm and related proteins; cl00259"
                     /db_xref="CDD:469694"
     CDS             1..303
                     /gene="LOC107893897"
                     /coded_by="XM_041086033.1:104..1015"
                     /db_xref="GeneID:107893897"
ORIGIN      
        1 msnsriifrs vlrssrrpsl gfaasslssa rfsplplpta lnppppfelk sissftssft
       61 rrlfhntasv hnknenhqqe eeelrfygta eddgeftdew eeedetvepk vgdggdgggi
      121 vlqglpwges alsiahdalk lfsddiklya fkttprgyiy vrldklsdey gcpsmeelqs
      181 ysqeykkrld eagerreipd dlalqvsspg aerilkvpdd ldrfkdmamr vcyiedagsn
      241 yteksgvfll dsveeencvw klaevkenrd pnskgrpfsr kqkdwrlklp fdkhkmimly
      301 ley
//
LOCUS       XP_040941968             518 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 78A5 [Gossypium hirsutum].
ACCESSION   XP_040941968
VERSION     XP_040941968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086034.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..518
                     /product="cytochrome P450 78A5"
                     /calculated_mol_wt=57991
     Region          84..509
                     /region_name="CYP78"
                     /note="cytochrome P450 family 78; cd11076"
                     /db_xref="CDD:410699"
     Site            order(121,143,147,155,202,319,322..323,326..327,386,
                     391..392,394,454..457,460..464,467..468)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410699"
     Site            order(229,233,257,318,321..322,392)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410699"
     CDS             1..518
                     /gene="LOC107893692"
                     /coded_by="XM_041086034.1:181..1737"
                     /db_xref="GeneID:107893692"
ORIGIN      
        1 msldhglllf qspllsfeaf lwaillvgiv slwlspggra waryrskasv aipgplgspv
       61 lglltvftga tphralakla esvkavklma fsvgftrfiv ssdpetardi lnnsafadrp
      121 vkesayellf hramgfapyg eywrnlrris athlfspkri agfegfrret gskmveqvkc
      181 lmeakgevfi rkllhfgsln nvmttvfgkk ydfekpgegl eleelvsegy ellgifnwsd
      241 hfpllrwldl qgvrkrcrnl vskvnvfvgk iieehrvnrv nggfndgdak vgefvdvllh
      301 lekheklsds dmiavlwemi frgtdtvail lewilarmvl hpeiqakaqa eidgvvgssk
      361 lvsdsdiqnl pcvraivket lrvhppgpll swarlaihdv higdnfipag ttamvnmwai
      421 thsekvwaep ekfkperfme edvsimgpdl rlapfgsgrr vcpgkamgla tvhlwlaqll
      481 qafkwvpced kdvdllehlk lsmemkkplv ckamprfa
//
LOCUS       XP_016674509             110 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPIRAL1-like 1 [Gossypium hirsutum].
ACCESSION   XP_016674509
VERSION     XP_016674509.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819020.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674509.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="protein SPIRAL1-like 1"
                     /calculated_mol_wt=10700
     CDS             1..110
                     /gene="LOC107893878"
                     /coded_by="XM_016819020.2:270..602"
                     /db_xref="GeneID:107893878"
ORIGIN      
        1 mgrgvssggg qsslgylfgs geapkpgtnn sqaapaeapa vskpgpapep vdiskqipag
       61 insisannym radgqntgnf ltdrpstkvh sapgggssld ylfggpggsk
//
LOCUS       XP_016674510             110 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPIRAL1-like 1 [Gossypium hirsutum].
ACCESSION   XP_016674510
VERSION     XP_016674510.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819021.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674510.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="protein SPIRAL1-like 1"
                     /calculated_mol_wt=10700
     CDS             1..110
                     /gene="LOC107893878"
                     /coded_by="XM_016819021.2:218..550"
                     /db_xref="GeneID:107893878"
ORIGIN      
        1 mgrgvssggg qsslgylfgs geapkpgtnn sqaapaeapa vskpgpapep vdiskqipag
       61 insisannym radgqntgnf ltdrpstkvh sapgggssld ylfggpggsk
//
LOCUS       XP_016674508             110 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPIRAL1-like 1 [Gossypium hirsutum].
ACCESSION   XP_016674508
VERSION     XP_016674508.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819019.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674508.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..110
                     /product="protein SPIRAL1-like 1"
                     /calculated_mol_wt=10700
     CDS             1..110
                     /gene="LOC107893878"
                     /coded_by="XM_016819019.2:303..635"
                     /db_xref="GeneID:107893878"
ORIGIN      
        1 mgrgvssggg qsslgylfgs geapkpgtnn sqaapaeapa vskpgpapep vdiskqipag
       61 insisannym radgqntgnf ltdrpstkvh sapgggssld ylfggpggsk
//
LOCUS       XP_040941969             138 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SET DOMAIN GROUP 40 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941969
VERSION     XP_040941969.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086035.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..138
                     /product="protein SET DOMAIN GROUP 40 isoform X1"
                     /calculated_mol_wt=15748
     CDS             1..138
                     /gene="LOC107893881"
                     /coded_by="XM_041086035.1:254..670"
                     /db_xref="GeneID:107893881"
ORIGIN      
        1 mklcllhtnp illtllpkfa fvfqysiyvl icvstkqndw tkaiclfsfa sysilaafge
       61 letqalqvdy aiwaaqkavt kakyeweqaf tlmkelklkp plltfrawiw atgtvssqcl
      121 cfsgffffsf ylcwtast
//
LOCUS       XP_016674512             137 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674512
VERSION     XP_016674512.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819023.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..137
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15563
     CDS             1..137
                     /gene="LOC107893881"
                     /coded_by="XM_016819023.2:247..660"
                     /db_xref="GeneID:107893881"
ORIGIN      
        1 mklcllhtnp illtllpkfa fvfqysiyvl icvstkqndw tkaiclfsfa sysilaafge
       61 letqalqvdy aiwaaqkavt kakyeweqaf tlmkelklkp plltfrawiw atgtaldlkp
      121 nyvrawanmg isyanqv
//
LOCUS       XP_016674514             293 aa            linear   PLN 06-AUG-2024
DEFINITION  ninja-family protein AFP3 [Gossypium hirsutum].
ACCESSION   XP_016674514
VERSION     XP_016674514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819025.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..293
                     /product="ninja-family protein AFP3"
                     /calculated_mol_wt=32008
     Region          60..87
                     /region_name="EAR"
                     /note="Ethylene-responsive binding factor-associated
                     repression; pfam07897"
                     /db_xref="CDD:462309"
     Region          111..>189
                     /region_name="NINJA_B"
                     /note="Putative nuclear localization signal; pfam16136"
                     /db_xref="CDD:406525"
     Region          253..>283
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     CDS             1..293
                     /gene="LOC107893884"
                     /coded_by="XM_016819025.2:116..997"
                     /db_xref="GeneID:107893884"
ORIGIN      
        1 mfpskmgsea senrskemen lslqtenspr nllqrfmsre tldstrsege ddedeeevel
       61 nlglslggrf gvdkhasklk rsssiagsip ifreddsana pppsvhhptt lirasslptv
      121 teeewrkrke lqtlrrmeak rrrsekqris rgkmeeskgl qgarnsgear ssgsasslqe
      181 qgdseaatgs sgtktsgser tlgligetve nkekeggkam edmphvftkg egpngkrvdg
      241 ilykygkgee vrimcvchgn ffsptefvkh agggdvdnpl rhivinpsss sll
//
LOCUS       XP_016674138             716 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific
            [Gossypium hirsutum].
ACCESSION   XP_016674138
VERSION     XP_016674138.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818649.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674138.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..716
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific"
                     /calculated_mol_wt=81781
     Region          383..430
                     /region_name="RING-HC_Topors"
                     /note="RING finger, HC subclass, found in topoisomerase
                     I-binding arginine/serine-rich protein (Topors) and
                     similar proteins; cd16574"
                     /db_xref="CDD:438236"
     Region          478..521
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(490..493,497,516)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..716
                     /gene="LOC107893614"
                     /coded_by="XM_016818649.2:92..2242"
                     /db_xref="GeneID:107893614"
ORIGIN      
        1 mgregkvghs snfkkrvrsk hegsddsded yvasegnegs dddaeyycss ldecaseegf
       61 qgyneeeeee vrevvrlkre rissvrerki ldkksvkres msveededkd fqeeeeeeee
      121 vrevvrlkre rissererki adkksvkqes lsveededkd yeeeeeeeke dddeeftpdv
      181 edcldeeftp deedcldeef tpdeedclde eeeltmtkkk nktkvskqvl rkkypskqrt
      241 krkrsavskk psrkqgrkkr rlkrkrraee dddnddcgfi dntpalrqms rtnagrrkea
      301 yvvpsdsdfv ssgssdyeyt vseeereqmk eanqffgslk tslrsssask riqeleelgq
      361 pkktpgrkgk ekieetkael ikpvcgicls eedkrrlrgt lnccshyfcf tcimewskve
      421 srcplckqrf etiskparsa agfdsrevli qvpkrdqvyq pseeelrsyl dpyenvicse
      481 chqggddelm llcdicdssa htycvglgre vpednwycdg crpvatgsss sqvqdslpdh
      541 riinnlynrf spmvnfgegl dsivgpsplm psipnfvgys sprfpavdip ivspasgaga
      601 ptltgrrwlh rqiqnlrsin rmnfmagrtd gilsanmgtd fvnshtdqst ettvqqartq
      661 dtgtqhqtvf eerlqddpss svpsrdssss rlenlrrqav qdsttpttnt sinltl
//
LOCUS       XP_040941970             716 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific
            [Gossypium hirsutum].
ACCESSION   XP_040941970
VERSION     XP_040941970.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086036.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..716
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific"
                     /calculated_mol_wt=81781
     Region          383..430
                     /region_name="RING-HC_Topors"
                     /note="RING finger, HC subclass, found in topoisomerase
                     I-binding arginine/serine-rich protein (Topors) and
                     similar proteins; cd16574"
                     /db_xref="CDD:438236"
     Region          478..521
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(490..493,497,516)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..716
                     /gene="LOC107893614"
                     /coded_by="XM_041086036.1:92..2242"
                     /db_xref="GeneID:107893614"
ORIGIN      
        1 mgregkvghs snfkkrvrsk hegsddsded yvasegnegs dddaeyycss ldecaseegf
       61 qgyneeeeee vrevvrlkre rissvrerki ldkksvkres msveededkd fqeeeeeeee
      121 vrevvrlkre rissererki adkksvkqes lsveededkd yeeeeeeeke dddeeftpdv
      181 edcldeeftp deedcldeef tpdeedclde eeeltmtkkk nktkvskqvl rkkypskqrt
      241 krkrsavskk psrkqgrkkr rlkrkrraee dddnddcgfi dntpalrqms rtnagrrkea
      301 yvvpsdsdfv ssgssdyeyt vseeereqmk eanqffgslk tslrsssask riqeleelgq
      361 pkktpgrkgk ekieetkael ikpvcgicls eedkrrlrgt lnccshyfcf tcimewskve
      421 srcplckqrf etiskparsa agfdsrevli qvpkrdqvyq pseeelrsyl dpyenvicse
      481 chqggddelm llcdicdssa htycvglgre vpednwycdg crpvatgsss sqvqdslpdh
      541 riinnlynrf spmvnfgegl dsivgpsplm psipnfvgys sprfpavdip ivspasgaga
      601 ptltgrrwlh rqiqnlrsin rmnfmagrtd gilsanmgtd fvnshtdqst ettvqqartq
      661 dtgtqhqtvf eerlqddpss svpsrdssss rlenlrrqav qdsttpttnt sinltl
//
LOCUS       XP_040941971             716 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific
            [Gossypium hirsutum].
ACCESSION   XP_040941971
VERSION     XP_040941971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086037.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..716
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific"
                     /calculated_mol_wt=81781
     Region          383..430
                     /region_name="RING-HC_Topors"
                     /note="RING finger, HC subclass, found in topoisomerase
                     I-binding arginine/serine-rich protein (Topors) and
                     similar proteins; cd16574"
                     /db_xref="CDD:438236"
     Region          478..521
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(490..493,497,516)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..716
                     /gene="LOC107893614"
                     /coded_by="XM_041086037.1:92..2242"
                     /db_xref="GeneID:107893614"
ORIGIN      
        1 mgregkvghs snfkkrvrsk hegsddsded yvasegnegs dddaeyycss ldecaseegf
       61 qgyneeeeee vrevvrlkre rissvrerki ldkksvkres msveededkd fqeeeeeeee
      121 vrevvrlkre rissererki adkksvkqes lsveededkd yeeeeeeeke dddeeftpdv
      181 edcldeeftp deedcldeef tpdeedclde eeeltmtkkk nktkvskqvl rkkypskqrt
      241 krkrsavskk psrkqgrkkr rlkrkrraee dddnddcgfi dntpalrqms rtnagrrkea
      301 yvvpsdsdfv ssgssdyeyt vseeereqmk eanqffgslk tslrsssask riqeleelgq
      361 pkktpgrkgk ekieetkael ikpvcgicls eedkrrlrgt lnccshyfcf tcimewskve
      421 srcplckqrf etiskparsa agfdsrevli qvpkrdqvyq pseeelrsyl dpyenvicse
      481 chqggddelm llcdicdssa htycvglgre vpednwycdg crpvatgsss sqvqdslpdh
      541 riinnlynrf spmvnfgegl dsivgpsplm psipnfvgys sprfpavdip ivspasgaga
      601 ptltgrrwlh rqiqnlrsin rmnfmagrtd gilsanmgtd fvnshtdqst ettvqqartq
      661 dtgtqhqtvf eerlqddpss svpsrdssss rlenlrrqav qdsttpttnt sinltl
//
LOCUS       XP_016674135             219 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DEHYDRATION-INDUCED 19 homolog 3 [Gossypium hirsutum].
ACCESSION   XP_016674135
VERSION     XP_016674135.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818646.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..219
                     /product="protein DEHYDRATION-INDUCED 19 homolog 3"
                     /calculated_mol_wt=24588
     Region          42..95
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     Region          115..214
                     /region_name="Di19_C"
                     /note="Stress-induced protein Di19, C-terminal; pfam14571"
                     /db_xref="CDD:434045"
     CDS             1..219
                     /gene="LOC107893613"
                     /coded_by="XM_016818646.2:259..918"
                     /db_xref="GeneID:107893613"
ORIGIN      
        1 mdadswstrl ssvskryqft lqsrsdmfmg feeidgeddi reefpspfcs ehfdilslcc
       61 hiddehpmea kngvcpvcam kvevdmvahi tlhhgnifkm qhkrkshkgg shsmlsrlrk
      121 elregnlqsl fggscilsss nsapdpllss filpmvddfv svqphfsset satekssdin
      181 klernvqstl lsvedqeekt ercefiqgll lstilddil
//
LOCUS       XP_040941972             326 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-43 [Gossypium hirsutum].
ACCESSION   XP_040941972
VERSION     XP_040941972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086038.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="syntaxin-43"
                     /calculated_mol_wt=36056
     Region          74..322
                     /region_name="COG5325"
                     /note="t-SNARE complex subunit, syntaxin [Intracellular
                     trafficking and secretion]"
                     /db_xref="CDD:227635"
     CDS             1..326
                     /gene="LOC107915884"
                     /coded_by="XM_041086038.1:336..1316"
                     /db_xref="GeneID:107915884"
ORIGIN      
        1 matrnrsllf rkyrdalksv ripasssass aatkssgggp vielvstsll hpnrsytpls
       61 tedpgnsskg avtvglppaw vdvseeiaan vqrartkmae latahakalm psfgdgkedq
      121 riieslthei tnllrksekr lqklsasgps edsnvrknvq rqlatslqnl smelrkkqst
      181 ylkrlrqqte gqdgvdlemn ingnrsyaen ddlddmifse hqmaklkqne altvererei
      241 qqvaesvnel aqimkdlsvl vidqgtivdr idyniqnvat tveeglkqlq kaertqkqgg
      301 mvmcatvlvi mcfvmlvlli lkeiif
//
LOCUS       XP_016703655             162 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 16 [Gossypium hirsutum].
ACCESSION   XP_016703655
VERSION     XP_016703655.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848166.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703655.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..162
                     /product="GATA transcription factor 16"
                     /calculated_mol_wt=17400
     Region          25..59
                     /region_name="GATA"
                     /note="GATA zinc finger; pfam00320"
                     /db_xref="CDD:425605"
     Site            order(25,28,47,50)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(34..35,37,47..57,71)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..162
                     /gene="LOC107918581"
                     /coded_by="XM_016848166.2:357..845"
                     /db_xref="GeneID:107918581"
ORIGIN      
        1 mgvmdlrakk swsedmmses skkfctdckt tktplwrggp agpkslcnac giryrkkrra
       61 mlclnkgiek kkeishspss dssssiapan dgggenlsan lnglsesvkm slfalgsevl
      121 fqtssslsgv vkkqrcqrrr rlgeeeqaai slmalscgtv fa
//
LOCUS       XP_016674139             569 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-binding protein 60 C [Gossypium hirsutum].
ACCESSION   XP_016674139
VERSION     XP_016674139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818650.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..569
                     /product="calmodulin-binding protein 60 C"
                     /calculated_mol_wt=64125
     Region          91..238
                     /region_name="Calmodulin_bind"
                     /note="Calmodulin binding protein-like N-terminal domain;
                     pfam07887"
                     /db_xref="CDD:462302"
     Region          251..316
                     /region_name="Calmod_bind_M"
                     /note="Calmodulin binding protein central domain;
                     pfam20451"
                     /db_xref="CDD:466600"
     Region          322..384
                     /region_name="Calmod_bind_C"
                     /note="Calmodulin binding protein C-terminal domain;
                     pfam20452"
                     /db_xref="CDD:466601"
     CDS             1..569
                     /gene="LOC107893615"
                     /coded_by="XM_016818650.2:527..2236"
                     /db_xref="GeneID:107893615"
ORIGIN      
        1 mmfpskrpsp degdercesm vpepkrratl enavrsimgf gglslnrivl nlepmlrswv
       61 reevekails sfhpssrsll nqteasrgrs lqlrfvnklp stiftgskve aedrdtikii
      121 lvdattetmv ssgslssiki eivvlnsefg aderqdwten efnasvlrer qgkrplvtgd
      181 vsitlvdgvg nvdnviftdn sswirsrkfr lgarivqris gestireats eafivkdhrg
      241 elykkhyppf lhdevwrler iakdgtfnkr ltsnniftvk dflrlhvids salrhilgcg
      301 isnrvwdtti ehalscvldd dewysyygta qsvglllnsi yrveaatfdg qnyqpvenmt
      361 fsqkllveda krqayknvge lvsvdrrati rplmpmtsll peplgitnll lqqpefsven
      421 edkpdtshgn fnhsstsyvy etedtnqlqv clqqdelair acnstlrnsf rmgdtfhsng
      481 enslsflsdd hfatednsea empiwisttp pwghasgsvs tpaasessss nfdvnnqrsm
      541 gesrdvwpka rwlklravih wrsftrgaa
//
LOCUS       XP_016674141             551 aa            linear   PLN 06-AUG-2024
DEFINITION  exopolyphosphatase [Gossypium hirsutum].
ACCESSION   XP_016674141
VERSION     XP_016674141.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818652.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..551
                     /product="exopolyphosphatase"
                     /calculated_mol_wt=61792
     Region          7..314
                     /region_name="ASKHA_NBD_PPX_GppA"
                     /note="nucleotide-binding domain (NBD) of the
                     exopolyphosphatase/guanosine pentaphosphate
                     phosphohydrolase (PPX/GppA) domain family; cd24006"
                     /db_xref="CDD:466856"
     CDS             1..551
                     /gene="LOC107893616"
                     /coded_by="XM_016818652.2:165..1820"
                     /db_xref="GeneID:107893616"
ORIGIN      
        1 mantlfaaid mgtnafklli vqahlpgkfi plltvrehvv lgrdspssti sthsqnlsvk
       61 slqnfnkliq thnvpllhtr cvatsavrea qnkakfihsi aettgfkvdv lsgeeesrfs
      121 ylgalqffpv fenlvlnidi gggstefaig lrgkiefcls lklghvtltq qnfgdeeaer
      181 asnmreyirn vikesglidk vknigfeial gssgtiraie kavfkgyald fadneallse
      241 ckrdwkfsie elksvverlc kggegqkvrr dgffkrrses ivaggillde ifdllgikem
      301 lvsgyglreg liadslakvf ddgydlnana rfrsilrlat rfnskritts aaeiasiare
      361 ifeglrkyke ldndgiyltv dldekdlenl eaacllhnig lstgkkgyhk ksyhiimngn
      421 hlrgysaeev klialltrhh rkklpkfnda sfnelkeakq kfkvlcaiir lsfvlhrngy
      481 inyremdfsh shegfklvig eergpnhqpv veqcvtdkfa veltheldyf kkvlkqelsv
      541 elkappfcsn e
//
LOCUS       XP_040941973              88 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription elongation factor SPT6 homolog [Gossypium hirsutum].
ACCESSION   XP_040941973
VERSION     XP_040941973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086039.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..88
                     /product="transcription elongation factor SPT6 homolog"
                     /calculated_mol_wt=10593
     CDS             1..88
                     /gene="LOC121212712"
                     /coded_by="XM_041086039.1:550..816"
                     /db_xref="GeneID:121212712"
ORIGIN      
        1 mlrfterlts tlpksysqlr ndgfhkvlwi ikeldkmwll lqkhksvhqm hqrkiydeey
       61 lkidnsekyt lnkqlfesis kplneaet
//
LOCUS       XP_016674144             585 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674144
VERSION     XP_016674144.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818655.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674144.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..585
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=67092
     Region          358..536
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(386..389,447..448,450..452,523)
                     /site_type="active"
                     /db_xref="CDD:176655"
     Site            order(386,388,452,523)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(387..389,447..448,450..451,523)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     CDS             1..585
                     /gene="LOC107893620"
                     /coded_by="XM_016818655.2:153..1910"
                     /db_xref="GeneID:107893620"
ORIGIN      
        1 mclfemgfee kaiklqvkee kacetkricl haftdltyva pivflyllke cyvhgnlkat
       61 krfralqllv hqvlcnspqp gpatfvaycl yilpifgsyc egfshlivsa fhrflktaat
      121 tgdsleakii avrlfldive gsidhderia vkilevfdik ltdiekvasq skakndrrfh
      181 svkafleqyi fgfiesesym tavnllehfs irqsgesflv kmiekkqfra aekwatfmgk
      241 pmlsmlirey vgrnklksay livkknnlqq efpdvhhkyk esalkklaek acwdvaeaka
      301 ngdrqlveyl vylameagyl ekvdelcnry clegfpkaqe heanflqhcf lnlnelgved
      361 iiwvdelngl gkatchiegs kvvgldcewk pnyvkgskpn kvsimqiasd kkvfildlik
      421 lyndvpdvld nclthllrsp rilklgynfq cdvkqlaqsy gdlecfkcfn mlldiqnmfk
      481 dprgglsgla ekilgaslnk trrnsnweqr plsqnqleya aldaavliqi fyrvcdhsht
      541 adaldehnki ewksyivshm dnlrksrkes rlrkepelev kdnea
//
LOCUS       XP_016674143             585 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674143
VERSION     XP_016674143.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818654.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674143.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..585
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=67092
     Region          358..536
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(386..389,447..448,450..452,523)
                     /site_type="active"
                     /db_xref="CDD:176655"
     Site            order(386,388,452,523)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(387..389,447..448,450..451,523)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     CDS             1..585
                     /gene="LOC107893620"
                     /coded_by="XM_016818654.2:136..1893"
                     /db_xref="GeneID:107893620"
ORIGIN      
        1 mclfemgfee kaiklqvkee kacetkricl haftdltyva pivflyllke cyvhgnlkat
       61 krfralqllv hqvlcnspqp gpatfvaycl yilpifgsyc egfshlivsa fhrflktaat
      121 tgdsleakii avrlfldive gsidhderia vkilevfdik ltdiekvasq skakndrrfh
      181 svkafleqyi fgfiesesym tavnllehfs irqsgesflv kmiekkqfra aekwatfmgk
      241 pmlsmlirey vgrnklksay livkknnlqq efpdvhhkyk esalkklaek acwdvaeaka
      301 ngdrqlveyl vylameagyl ekvdelcnry clegfpkaqe heanflqhcf lnlnelgved
      361 iiwvdelngl gkatchiegs kvvgldcewk pnyvkgskpn kvsimqiasd kkvfildlik
      421 lyndvpdvld nclthllrsp rilklgynfq cdvkqlaqsy gdlecfkcfn mlldiqnmfk
      481 dprgglsgla ekilgaslnk trrnsnweqr plsqnqleya aldaavliqi fyrvcdhsht
      541 adaldehnki ewksyivshm dnlrksrkes rlrkepelev kdnea
//
LOCUS       XP_040941974             495 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941974
VERSION     XP_040941974.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086040.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..495
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=56508
     Region          358..>480
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(386..389,447..448,450..452)
                     /site_type="active"
                     /db_xref="CDD:176655"
     Site            order(387..389,447..448,450..451)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     CDS             1..495
                     /gene="LOC107893620"
                     /coded_by="XM_041086040.1:153..1640"
                     /db_xref="GeneID:107893620"
ORIGIN      
        1 mclfemgfee kaiklqvkee kacetkricl haftdltyva pivflyllke cyvhgnlkat
       61 krfralqllv hqvlcnspqp gpatfvaycl yilpifgsyc egfshlivsa fhrflktaat
      121 tgdsleakii avrlfldive gsidhderia vkilevfdik ltdiekvasq skakndrrfh
      181 svkafleqyi fgfiesesym tavnllehfs irqsgesflv kmiekkqfra aekwatfmgk
      241 pmlsmlirey vgrnklksay livkknnlqq efpdvhhkyk esalkklaek acwdvaeaka
      301 ngdrqlveyl vylameagyl ekvdelcnry clegfpkaqe heanflqhcf lnlnelgved
      361 iiwvdelngl gkatchiegs kvvgldcewk pnyvkgskpn kvsimqiasd kkvfildlik
      421 lyndvpdvld nclthllrsp rilklgynfq cdvkqlaqsy gdlecfkcfn mlldiqnmfk
      481 dprgglsgla efptn
//
LOCUS       XP_016674147             916 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674147
VERSION     XP_016674147.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818658.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..916
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=102360
     Region          83..114
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          766..909
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..916
                     /gene="LOC107893621"
                     /coded_by="XM_016818658.2:4810..7560"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 mklksdeime verkhskggf fhlfdwngks qkklfpnnae iseeskrvkp venilksppy
       61 mmegdeynaa ssyrrsadfs sassvandeg ygsrapgvva rlmgldslpa pnvlepsstt
      121 ysgscslrvs hyersspnlw nesqpmdytd fsnkldslss npieprfhkv qncpierfqt
      181 qilplksakp ipitqhklls pikspgfipt knaayimeaa skiievspqk tskhkvpsfg
      241 lssvplqiwd lkdkieaehk vsghqrpdep irsteislkg qhkskshnrs dcaptfsisr
      301 dsekgssnns rnkgksvsla eqarvnnvqr kkgsfssgng ssanlkegnd akrkqlcrsq
      361 admrksmeng isanrtnkvl rqnnqkqnci sdrdysiskt saldqqgrkt rsingtvgln
      421 rtinkvivns esqsrktssl atnpskehsm srrknlprkk qpinedvlsg etisentsik
      481 strrsikctv tteehsnqsa ekmktsmdvv sftftspiar svpdapstsq vvetscsfdn
      541 dpcgnndlly skssgfsslg lniiggddls vllgkklqel ayrvessdcn iimeetssrp
      601 asswknsvlp sgtlittsmr hhkglqldld kdisystadf ncssidhlel dwrrkwqfse
      661 eiedrnasks ssetgteldh qqpsplstle lavtsecfad drdgmkqell arnqellgsq
      721 pgsesetefn valsyfaspk tvgemdkklp trtpnsrdlk estnweldyv kmvlkdselk
      781 lmeyalgqte nittpngfdq lkhwnitetq geeyktleqk lvvdyvseyl efvvgsckgw
      841 gklmqnkgkl aeevykeims lkqmgdkmvd evvdkdmsrk hgrwvefete afeegleiek
      901 tiltclvdel vfdlll
//
LOCUS       XP_016674145             916 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674145
VERSION     XP_016674145.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818656.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..916
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=102360
     Region          83..114
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          766..909
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..916
                     /gene="LOC107893621"
                     /coded_by="XM_016818656.2:5506..8256"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 mklksdeime verkhskggf fhlfdwngks qkklfpnnae iseeskrvkp venilksppy
       61 mmegdeynaa ssyrrsadfs sassvandeg ygsrapgvva rlmgldslpa pnvlepsstt
      121 ysgscslrvs hyersspnlw nesqpmdytd fsnkldslss npieprfhkv qncpierfqt
      181 qilplksakp ipitqhklls pikspgfipt knaayimeaa skiievspqk tskhkvpsfg
      241 lssvplqiwd lkdkieaehk vsghqrpdep irsteislkg qhkskshnrs dcaptfsisr
      301 dsekgssnns rnkgksvsla eqarvnnvqr kkgsfssgng ssanlkegnd akrkqlcrsq
      361 admrksmeng isanrtnkvl rqnnqkqnci sdrdysiskt saldqqgrkt rsingtvgln
      421 rtinkvivns esqsrktssl atnpskehsm srrknlprkk qpinedvlsg etisentsik
      481 strrsikctv tteehsnqsa ekmktsmdvv sftftspiar svpdapstsq vvetscsfdn
      541 dpcgnndlly skssgfsslg lniiggddls vllgkklqel ayrvessdcn iimeetssrp
      601 asswknsvlp sgtlittsmr hhkglqldld kdisystadf ncssidhlel dwrrkwqfse
      661 eiedrnasks ssetgteldh qqpsplstle lavtsecfad drdgmkqell arnqellgsq
      721 pgsesetefn valsyfaspk tvgemdkklp trtpnsrdlk estnweldyv kmvlkdselk
      781 lmeyalgqte nittpngfdq lkhwnitetq geeyktleqk lvvdyvseyl efvvgsckgw
      841 gklmqnkgkl aeevykeims lkqmgdkmvd evvdkdmsrk hgrwvefete afeegleiek
      901 tiltclvdel vfdlll
//
LOCUS       XP_016674146             916 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674146
VERSION     XP_016674146.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818657.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..916
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=102360
     Region          83..114
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          766..909
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..916
                     /gene="LOC107893621"
                     /coded_by="XM_016818657.2:5371..8121"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 mklksdeime verkhskggf fhlfdwngks qkklfpnnae iseeskrvkp venilksppy
       61 mmegdeynaa ssyrrsadfs sassvandeg ygsrapgvva rlmgldslpa pnvlepsstt
      121 ysgscslrvs hyersspnlw nesqpmdytd fsnkldslss npieprfhkv qncpierfqt
      181 qilplksakp ipitqhklls pikspgfipt knaayimeaa skiievspqk tskhkvpsfg
      241 lssvplqiwd lkdkieaehk vsghqrpdep irsteislkg qhkskshnrs dcaptfsisr
      301 dsekgssnns rnkgksvsla eqarvnnvqr kkgsfssgng ssanlkegnd akrkqlcrsq
      361 admrksmeng isanrtnkvl rqnnqkqnci sdrdysiskt saldqqgrkt rsingtvgln
      421 rtinkvivns esqsrktssl atnpskehsm srrknlprkk qpinedvlsg etisentsik
      481 strrsikctv tteehsnqsa ekmktsmdvv sftftspiar svpdapstsq vvetscsfdn
      541 dpcgnndlly skssgfsslg lniiggddls vllgkklqel ayrvessdcn iimeetssrp
      601 asswknsvlp sgtlittsmr hhkglqldld kdisystadf ncssidhlel dwrrkwqfse
      661 eiedrnasks ssetgteldh qqpsplstle lavtsecfad drdgmkqell arnqellgsq
      721 pgsesetefn valsyfaspk tvgemdkklp trtpnsrdlk estnweldyv kmvlkdselk
      781 lmeyalgqte nittpngfdq lkhwnitetq geeyktleqk lvvdyvseyl efvvgsckgw
      841 gklmqnkgkl aeevykeims lkqmgdkmvd evvdkdmsrk hgrwvefete afeegleiek
      901 tiltclvdel vfdlll
//
LOCUS       XP_016674148             915 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674148
VERSION     XP_016674148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818659.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..915
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=102231
     Region          82..113
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          765..908
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..915
                     /gene="LOC107893621"
                     /coded_by="XM_016818659.2:5503..8250"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 mklksdeime verkhskggf fhlfdwngks qkklfpnnae iseskrvkpv enilksppym
       61 megdeynaas syrrsadfss assvandegy gsrapgvvar lmgldslpap nvlepsstty
      121 sgscslrvsh yersspnlwn esqpmdytdf snkldslssn pieprfhkvq ncpierfqtq
      181 ilplksakpi pitqhkllsp ikspgfiptk naayimeaas kiievspqkt skhkvpsfgl
      241 ssvplqiwdl kdkieaehkv sghqrpdepi rsteislkgq hkskshnrsd captfsisrd
      301 sekgssnnsr nkgksvslae qarvnnvqrk kgsfssgngs sanlkegnda krkqlcrsqa
      361 dmrksmengi sanrtnkvlr qnnqkqncis drdysiskts aldqqgrktr singtvglnr
      421 tinkvivnse sqsrktssla tnpskehsms rrknlprkkq pinedvlsge tisentsiks
      481 trrsikctvt teehsnqsae kmktsmdvvs ftftspiars vpdapstsqv vetscsfdnd
      541 pcgnndllys kssgfsslgl niiggddlsv llgkklqela yrvessdcni imeetssrpa
      601 sswknsvlps gtlittsmrh hkglqldldk disystadfn cssidhleld wrrkwqfsee
      661 iedrnaskss setgteldhq qpsplstlel avtsecfadd rdgmkqella rnqellgsqp
      721 gsesetefnv alsyfaspkt vgemdkklpt rtpnsrdlke stnweldyvk mvlkdselkl
      781 meyalgqten ittpngfdql khwnitetqg eeyktleqkl vvdyvseyle fvvgsckgwg
      841 klmqnkgkla eevykeimsl kqmgdkmvde vvdkdmsrkh grwvefetea feegleiekt
      901 iltclvdelv fdlll
//
LOCUS       XP_016674150             908 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674150
VERSION     XP_016674150.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818661.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..908
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=101415
     Region          75..106
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          758..901
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..908
                     /gene="LOC107893621"
                     /coded_by="XM_016818661.2:172..2898"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 meverkhskg gffhlfdwng ksqkklfpnn aeiseeskrv kpvenilksp pymmegdeyn
       61 aassyrrsad fssassvand egygsrapgv varlmgldsl papnvlepss ttysgscslr
      121 vshyersspn lwnesqpmdy tdfsnkldsl ssnpieprfh kvqncpierf qtqilplksa
      181 kpipitqhkl lspikspgfi ptknaayime aaskiievsp qktskhkvps fglssvplqi
      241 wdlkdkieae hkvsghqrpd epirsteisl kgqhkskshn rsdcaptfsi srdsekgssn
      301 nsrnkgksvs laeqarvnnv qrkkgsfssg ngssanlkeg ndakrkqlcr sqadmrksme
      361 ngisanrtnk vlrqnnqkqn cisdrdysis ktsaldqqgr ktrsingtvg lnrtinkviv
      421 nsesqsrkts slatnpskeh smsrrknlpr kkqpinedvl sgetisents ikstrrsikc
      481 tvtteehsnq saekmktsmd vvsftftspi arsvpdapst sqvvetscsf dndpcgnndl
      541 lyskssgfss lglniiggdd lsvllgkklq elayrvessd cniimeetss rpasswknsv
      601 lpsgtlitts mrhhkglqld ldkdisysta dfncssidhl eldwrrkwqf seeiedrnas
      661 ksssetgtel dhqqpsplst lelavtsecf addrdgmkqe llarnqellg sqpgsesete
      721 fnvalsyfas pktvgemdkk lptrtpnsrd lkestnweld yvkmvlkdse lklmeyalgq
      781 tenittpngf dqlkhwnite tqgeeyktle qklvvdyvse ylefvvgsck gwgklmqnkg
      841 klaeevykei mslkqmgdkm vdevvdkdms rkhgrwvefe teafeeglei ektiltclvd
      901 elvfdlll
//
LOCUS       XP_040941975             907 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941975
VERSION     XP_040941975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086041.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..907
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=101286
     Region          74..105
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          757..900
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..907
                     /gene="LOC107893621"
                     /coded_by="XM_041086041.1:5005..7728"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 meverkhskg gffhlfdwng ksqkklfpnn aeiseskrvk pvenilkspp ymmegdeyna
       61 assyrrsadf ssassvande gygsrapgvv arlmgldslp apnvlepsst tysgscslrv
      121 shyersspnl wnesqpmdyt dfsnkldsls snpieprfhk vqncpierfq tqilplksak
      181 pipitqhkll spikspgfip tknaayimea askiievspq ktskhkvpsf glssvplqiw
      241 dlkdkieaeh kvsghqrpde pirsteislk gqhkskshnr sdcaptfsis rdsekgssnn
      301 srnkgksvsl aeqarvnnvq rkkgsfssgn gssanlkegn dakrkqlcrs qadmrksmen
      361 gisanrtnkv lrqnnqkqnc isdrdysisk tsaldqqgrk trsingtvgl nrtinkvivn
      421 sesqsrktss latnpskehs msrrknlprk kqpinedvls getisentsi kstrrsikct
      481 vtteehsnqs aekmktsmdv vsftftspia rsvpdapsts qvvetscsfd ndpcgnndll
      541 yskssgfssl glniiggddl svllgkklqe layrvessdc niimeetssr passwknsvl
      601 psgtlittsm rhhkglqldl dkdisystad fncssidhle ldwrrkwqfs eeiedrnask
      661 sssetgteld hqqpsplstl elavtsecfa ddrdgmkqel larnqellgs qpgsesetef
      721 nvalsyfasp ktvgemdkkl ptrtpnsrdl kestnweldy vkmvlkdsel klmeyalgqt
      781 enittpngfd qlkhwnitet qgeeyktleq klvvdyvsey lefvvgsckg wgklmqnkgk
      841 laeevykeim slkqmgdkmv devvdkdmsr khgrwvefet eafeegleie ktiltclvde
      901 lvfdlll
//
LOCUS       XP_040941976             901 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941976
VERSION     XP_040941976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086042.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..901
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=100717
     Region          68..99
                     /region_name="VARLMGL"
                     /note="DUF761-associated sequence motif; pfam14383"
                     /db_xref="CDD:405132"
     Region          751..894
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..901
                     /gene="LOC107893621"
                     /coded_by="XM_041086042.1:5503..8208"
                     /db_xref="GeneID:107893621"
ORIGIN      
        1 mklksdeime verkhskggf fhlfdwnees krvkpvenil ksppymmegd eynaassyrr
       61 sadfssassv andegygsra pgvvarlmgl dslpapnvle pssttysgsc slrvshyers
      121 spnlwnesqp mdytdfsnkl dslssnpiep rfhkvqncpi erfqtqilpl ksakpipitq
      181 hkllspiksp gfiptknaay imeaaskiie vspqktskhk vpsfglssvp lqiwdlkdki
      241 eaehkvsghq rpdepirste islkgqhksk shnrsdcapt fsisrdsekg ssnnsrnkgk
      301 svslaeqarv nnvqrkkgsf ssgngssanl kegndakrkq lcrsqadmrk smengisanr
      361 tnkvlrqnnq kqncisdrdy sisktsaldq qgrktrsing tvglnrtink vivnsesqsr
      421 ktsslatnps kehsmsrrkn lprkkqpine dvlsgetise ntsikstrrs ikctvtteeh
      481 snqsaekmkt smdvvsftft spiarsvpda pstsqvvets csfdndpcgn ndllyskssg
      541 fsslglniig gddlsvllgk klqelayrve ssdcniimee tssrpasswk nsvlpsgtli
      601 ttsmrhhkgl qldldkdisy stadfncssi dhleldwrrk wqfseeiedr nasksssetg
      661 teldhqqpsp lstlelavts ecfaddrdgm kqellarnqe llgsqpgses etefnvalsy
      721 faspktvgem dkklptrtpn srdlkestnw eldyvkmvlk dselklmeya lgqtenittp
      781 ngfdqlkhwn itetqgeeyk tleqklvvdy vseylefvvg sckgwgklmq nkgklaeevy
      841 keimslkqmg dkmvdevvdk dmsrkhgrwv efeteafeeg leiektiltc lvdelvfdll
      901 l
//
LOCUS       XP_016727853             421 aa            linear   PLN 06-AUG-2024
DEFINITION  calreticulin [Gossypium hirsutum].
ACCESSION   XP_016727853
VERSION     XP_016727853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..421
                     /product="calreticulin"
                     /calculated_mol_wt=47875
     Region          28..337
                     /region_name="Calreticulin"
                     /note="Calreticulin family; pfam00262"
                     /db_xref="CDD:459737"
     CDS             1..421
                     /gene="LOC107939081"
                     /coded_by="XM_016872364.2:61..1326"
                     /db_xref="GeneID:107939081"
ORIGIN      
        1 maipkripnf islilvsffv iasaevffee rfddgwesrw vksdwkkddn magewnytsg
       61 kwsgnlndkg iqtsedyrfy aisakfpevn nkgktlvfqf svkheqqldc gggymkllsg
      121 didqknfggd tpysimfgpd icgstkkvha ilhykgtnhl mkkevpcetd qlthvytfil
      181 hpdatykili dnvgkrtgsl ytdwdllppk rikdpsakkp edwddkefip dpedkkpegy
      241 ddipkeipdp dakkpedwdd eedgewtpst ipnpeyngpw kpkkiknpny ngkwkapkid
      301 npdfkddpdl yvfpnlkhvg ielwqvksgt lfdnilvadd veyakklaee twgkqkdaek
      361 aafeeaekkk eedskddsad sdvdddhgds ssddgegses dfdskadask dsvekdvhde
      421 l
//
LOCUS       XP_016675731             312 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675731
VERSION     XP_016675731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820242.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..312
                     /product="homeobox protein knotted-1-like 1 isoform X1"
                     /calculated_mol_wt=35243
     Region          61..100
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          110..157
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          198..219
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          239..277
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..312
                     /gene="LOC107895047"
                     /coded_by="XM_016820242.2:403..1341"
                     /db_xref="GeneID:107895047"
ORIGIN      
        1 medlyrlddp iiscsngiar vnnfaapnft atdflspvdh llqfddqevd tdatgshmsg
       61 liksqisnhp rypnlvsayi ecqkvgappk laslleeigr enrsvnacse igadpeldef
      121 mesycevlhr ykeelskpfn eattflsnik sqlsdlckga ltknldypfd egggssveel
      181 sggevegfen qdecgrqdik gmlmrkysgy lsslrkeflk krkkgklpke arvtlldwwn
      241 nhyrwpypte edklklseit gldqkqinnw finqrkrhwk psedmkfalm egfagdpmhf
      301 ghgvgpgsdn ic
//
LOCUS       XP_040941977             255 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941977
VERSION     XP_040941977.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086043.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..255
                     /product="homeobox protein knotted-1-like 1 isoform X2"
                     /calculated_mol_wt=28947
     Region          4..43
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          53..100
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          141..162
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          182..220
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..255
                     /gene="LOC107895047"
                     /coded_by="XM_041086043.1:256..1023"
                     /db_xref="GeneID:107895047"
ORIGIN      
        1 msgliksqis nhprypnlvs ayiecqkvga ppklasllee igrenrsvna cseigadpel
       61 defmesycev lhrykeelsk pfneattfls niksqlsdlc kgaltknldy pfdegggssv
      121 eelsggeveg fenqdecgrq dikgmlmrky sgylsslrke flkkrkkgkl pkearvtlld
      181 wwnnhyrwpy pteedklkls eitgldqkqi nnwfinqrkr hwkpsedmkf almegfagdp
      241 mhfghgvgpg sdnic
//
LOCUS       XP_016674152             597 aa            linear   PLN 06-AUG-2024
DEFINITION  solute carrier family 40 member 3, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016674152
VERSION     XP_016674152.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818663.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..597
                     /product="solute carrier family 40 member 3,
                     chloroplastic"
                     /calculated_mol_wt=63815
     Region          145..560
                     /region_name="FPN1"
                     /note="Ferroportin1 (FPN1); pfam06963"
                     /db_xref="CDD:462052"
     CDS             1..597
                     /gene="LOC107893624"
                     /coded_by="XM_016818663.2:618..2411"
                     /db_xref="GeneID:107893624"
ORIGIN      
        1 mamvavtnsq lsfnlfnfsv srreafisrq aasgihhrfs ssrwlslnsp ptnthsrsfd
       61 sfklrcsitn tdvhfnhvai ededlsatds dcccttpilq lksdvletes lniltgdayv
      121 dsllttlpvl seeeqealaa tpahpeglya fyasclagnl veqlwnfawp saiallhpsl
      181 lpvavmgfft klaiiiggpl vgklmdhspr vpsyiflnav qasaqllsva miihahsfss
      241 asasssllhp wfavlviaga ierlsgvalg iamerdwvvl lagtnrpial aqanavlnri
      301 dllceiagts lfgtllsryd pvtclkfaag lmmsslpvmi altwltnkls agvldrakcs
      361 qsccrtsaeg plpdadnlvd tglkaiklgw seyiqqpvlp aslayvllyf nvltpgslmt
      421 afltqrglsp siiggfsglc aimgvaatfi satlvrrfgi lkagavglif qaslltiava
      481 iyqsgpfaqt spllfflcli vlsrlghmsy divgaqilqt gipsskanli gtteisvasl
      541 aeslmlgiai iandvshfgf lallsllsvv gaswifcrwl lnpteeqssl fsfdpqf
//
LOCUS       XP_040941978             597 aa            linear   PLN 06-AUG-2024
DEFINITION  solute carrier family 40 member 3, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040941978
VERSION     XP_040941978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086044.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..597
                     /product="solute carrier family 40 member 3,
                     chloroplastic"
                     /calculated_mol_wt=63815
     Region          145..560
                     /region_name="FPN1"
                     /note="Ferroportin1 (FPN1); pfam06963"
                     /db_xref="CDD:462052"
     CDS             1..597
                     /gene="LOC107893624"
                     /coded_by="XM_041086044.1:328..2121"
                     /db_xref="GeneID:107893624"
ORIGIN      
        1 mamvavtnsq lsfnlfnfsv srreafisrq aasgihhrfs ssrwlslnsp ptnthsrsfd
       61 sfklrcsitn tdvhfnhvai ededlsatds dcccttpilq lksdvletes lniltgdayv
      121 dsllttlpvl seeeqealaa tpahpeglya fyasclagnl veqlwnfawp saiallhpsl
      181 lpvavmgfft klaiiiggpl vgklmdhspr vpsyiflnav qasaqllsva miihahsfss
      241 asasssllhp wfavlviaga ierlsgvalg iamerdwvvl lagtnrpial aqanavlnri
      301 dllceiagts lfgtllsryd pvtclkfaag lmmsslpvmi altwltnkls agvldrakcs
      361 qsccrtsaeg plpdadnlvd tglkaiklgw seyiqqpvlp aslayvllyf nvltpgslmt
      421 afltqrglsp siiggfsglc aimgvaatfi satlvrrfgi lkagavglif qaslltiava
      481 iyqsgpfaqt spllfflcli vlsrlghmsy divgaqilqt gipsskanli gtteisvasl
      541 aeslmlgiai iandvshfgf lallsllsvv gaswifcrwl lnpteeqssl fsfdpqf
//
LOCUS       XP_016674153             245 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit beta type-4 [Gossypium hirsutum].
ACCESSION   XP_016674153
VERSION     XP_016674153.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818664.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674153.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="proteasome subunit beta type-4"
                     /calculated_mol_wt=27646
     Region          29..222
                     /region_name="proteasome_beta_type_4"
                     /note="proteasome beta type-4 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03760"
                     /db_xref="CDD:239729"
     Site            order(31,47,49,63,163,200,203..204)
                     /site_type="active"
                     /db_xref="CDD:239729"
     Site            order(49,52,54..59,79,81,96,109,112..113,115..116,119,122,
                     148,150,152..155,158,166..167,169..170,173..175,191,
                     198..201,204..205)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239729"
     CDS             1..245
                     /gene="LOC107893625"
                     /coded_by="XM_016818664.2:208..945"
                     /db_xref="GeneID:107893625"
ORIGIN      
        1 mnfmaskqpe nsllspesds qrtlypyvtg tsvvalkykd gilmaadmgg sygstlryks
       61 vermkpigkh sllgasgeis dfqeilryld elilydnmwd dgnslgpkev hnyltrvmyn
      121 rrnkfnplwn slvlggvkng qkylgtvsmi gvnfednhva tgfgnhlarp ilrqewhenl
      181 sfedgvrlle kcmrvllyrd rsavnklqia kiteegvtis qpyslktywe fsafenpaqg
      241 aigsw
//
LOCUS       XP_040941979             199 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941979
VERSION     XP_040941979.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086045.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..199
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=21180
     Region          1..>48
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..199
                     /gene="LOC121212714"
                     /coded_by="XM_041086045.1:953..1552"
                     /db_xref="GeneID:121212714"
ORIGIN      
        1 mrvilasnrg tvmelgitpi vtsglvmqll agskiievdn svrenralll akvefgfgsg
       61 gkskwstsrl vpiivfrdtg nvsglksrrl ragnisgpks rrlhagnvsg pkshrlragn
      121 vsgpkshrlr agnvsglksr rlragnvsgp ksrrlragnv sglksrrlct gniipgfips
      181 rpsadefdks iqlqdptls
//
LOCUS       XP_040941980             199 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941980
VERSION     XP_040941980.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086046.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..199
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=21180
     Region          1..>48
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..199
                     /gene="LOC121212714"
                     /coded_by="XM_041086046.1:460..1059"
                     /db_xref="GeneID:121212714"
ORIGIN      
        1 mrvilasnrg tvmelgitpi vtsglvmqll agskiievdn svrenralll akvefgfgsg
       61 gkskwstsrl vpiivfrdtg nvsglksrrl ragnisgpks rrlhagnvsg pkshrlragn
      121 vsgpkshrlr agnvsglksr rlragnvsgp ksrrlragnv sglksrrlct gniipgfips
      181 rpsadefdks iqlqdptls
//
LOCUS       XP_040941981             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941981
VERSION     XP_040941981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086047.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..186
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19750
     Region          1..>48
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..186
                     /gene="LOC121212714"
                     /coded_by="XM_041086047.1:1192..1752"
                     /db_xref="GeneID:121212714"
ORIGIN      
        1 mrvilasnrg tvmelgitpi vtsglvmqll agskiievdn svredralll akvefgfgsg
       61 gkskwstsrl vpiivfrdtg nvsglksrrl ragnisgpks crlragnvsg lksrrlragn
      121 vsgpksrrlr agnvsgpksr rlragnvsgl ksrrlctgni isgfipsrps adefdksill
      181 qdptlg
//
LOCUS       XP_040941982             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941982
VERSION     XP_040941982.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086048.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..186
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19750
     Region          1..>48
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..186
                     /gene="LOC121212714"
                     /coded_by="XM_041086048.1:327..887"
                     /db_xref="GeneID:121212714"
ORIGIN      
        1 mrvilasnrg tvmelgitpi vtsglvmqll agskiievdn svredralll akvefgfgsg
       61 gkskwstsrl vpiivfrdtg nvsglksrrl ragnisgpks crlragnvsg lksrrlragn
      121 vsgpksrrlr agnvsgpksr rlragnvsgl ksrrlctgni isgfipsrps adefdksill
      181 qdptlg
//
LOCUS       XP_040941983             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941983
VERSION     XP_040941983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086049.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=19563
     Region          4..>32
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..183
                     /gene="LOC121212714"
                     /coded_by="XM_041086049.1:1600..2151"
                     /db_xref="GeneID:121212714"
ORIGIN      
        1 meyivtsglv mqllagskii evdnsvrenr alllakvefg fgsggkskws tsrlvpiivf
       61 rdtgnvsglk srrlragnis gpksrrlhag nvsgpkshrl ragnvsgpks hrlragnvsg
      121 lksrrlragn vsgpksrrlr agnvsglksr rlctgniipg fipsrpsade fdksiqlqdp
      181 tls
//
LOCUS       XP_040941984             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941984
VERSION     XP_040941984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086050.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=19563
     Region          4..>32
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..183
                     /gene="LOC121212714"
                     /coded_by="XM_041086050.1:323..874"
                     /db_xref="GeneID:121212714"
ORIGIN      
        1 meyivtsglv mqllagskii evdnsvrenr alllakvefg fgsggkskws tsrlvpiivf
       61 rdtgnvsglk srrlragnis gpksrrlhag nvsgpkshrl ragnvsgpks hrlragnvsg
      121 lksrrlragn vsgpksrrlr agnvsglksr rlctgniipg fipsrpsade fdksiqlqdp
      181 tls
//
LOCUS       XP_016685487            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016685487
VERSION     XP_016685487.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829998.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685487.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1076
                     /product="protein SUPPRESSOR OF QUENCHING 1, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=117610
     Region          1..1073
                     /region_name="PLN02919"
                     /note="haloacid dehalogenase-like hydrolase family
                     protein"
                     /db_xref="CDD:215497"
     CDS             1..1076
                     /gene="LOC107903827"
                     /coded_by="XM_016829998.2:237..3467"
                     /db_xref="GeneID:107903827"
ORIGIN      
        1 mavrllstpt alsdptklsf fsspkpista tsffqwrskc riftrkmvvk acvkveeknv
       61 ketskqewgk vtavlfdmdg vlcnsenpsr kaavdvfaem gvqviaedfa pftgmgeanf
      121 lggvasvkgv kefnteaakk rffeiyldky akpnsgigfp gafelineck nkglkvavas
      181 sadrvkvdan laaaglplsm fdaivsadaf enlkpapdif laaskildvs pdeclvieda
      241 lagvqaanaa kmrciavttt lteetlkpag psiirndigs vslddilsgg sdemvqnmrf
      301 lqvteqnpsr ilnertrngs tpgvdvpsne vfslqglqgs rrdilrygsl gialsclyfa
      361 vsnwkamqya spkaiwnmlf aaknpffgpt edeshsariq qfvnyisdle srgtapkvpe
      421 fpakldwlnt aplqfqrdlq gkvvlldfwt yccincmhvl pdldflekky kakpftvigv
      481 hsakfdnekd leairnavlr ygithpvvnd gdmylwqelg vnswptfaiv gpngkllaqi
      541 ageghrkdld ylveaalify dqkklldnkp iplnlekdnd prmltsplkf pgklaidiln
      601 nrlfvsdsnh nrivvtdldg nfivqigstg eeglhdgsfd datfnrpqgl aynakknlly
      661 vadtenhalr eidfvnekvq tlagnetkgs dytgggkgas qllnspwdvc fdpvnekvyv
      721 amagqhqiwe hsiqdgvtka fsgngcernl ngssstntsf aqpsgislsp dlmeayvads
      781 esssiraldl ktggsrllag gdpvfsenlf rfgdhdgigs dvllqhplgv lcakdgqiyi
      841 adsynhkikk ldpaskrvtt lagtgkagfk dgkalaaqls epsgiieaen grliiadtnn
      901 sliryldlnk enaeiltlel kgvqpptpks kslrrirkrs sadtqtivvn ggsssegnly
      961 lkislpeeyh fskeaqskft vdiepanavs idpldgklsp egstklhfrr stssaftgmi
     1021 nckvyycked evclyqsllf evpfqeedpq akpadiklvy dvkpkastns lqliap
//
LOCUS       XP_016685489             981 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016685489
VERSION     XP_016685489.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830000.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..981
                     /product="protein SUPPRESSOR OF QUENCHING 1, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=106952
     Region          1..977
                     /region_name="PLN02919"
                     /note="haloacid dehalogenase-like hydrolase family
                     protein"
                     /db_xref="CDD:215497"
     CDS             1..981
                     /gene="LOC107903827"
                     /coded_by="XM_016830000.2:237..3182"
                     /db_xref="GeneID:107903827"
ORIGIN      
        1 mavrllstpt alsdptklsf fsspkpista tsffqwrskc riftrkmvvk acvkveeknv
       61 ketskqewgk vtavlfdmdg vlcnsenpsr kaavdvfaem gvqviaedfa pftgmgeanf
      121 lggvasvkgv kefnteaakk rffeiyldky akpnsgigfp gafelineck nkglkvavas
      181 sadrvkvdan laaaglplsm fdaivsadaf enlkpapdif laaskildvs pdeclvieda
      241 lagvqaanaa kmrciavttt lteetlkpag psiirndigs vslddilsgg sdemvqnmrf
      301 lqvteqnpsr ilnertrngs tpgvdvpsne vfslqglqgs rrdilrygsl gialsclyfa
      361 vsnwkamqya spkaiwnmlf aaknpffgpt edeshsariq qfvnyisdle srgtapkvpe
      421 fpakldwlnt aplqfqrdlq gkvvlldfwt yccincmhvl pdldflekky kakpftvigv
      481 hsakfdnekd leairnavlr ygithpvvnd gdmylwqelg vnswptfaiv gpngkllaqi
      541 ageghrkdld ylveaalify dqkklldnkp iplnlekdnd prmltsplkf pgklaidiln
      601 nrlfvsdsnh nrivvtdldg nfivqigstg eeglhdgsfd datfnrpqgl aynakknlly
      661 vadtenhalr eidfvnekvq tlagnetkgs dytgggkgas qllnspwdvc fdpvnekvyv
      721 amagqhqiwe hsiqdgvtka fsgngcernl ngssstntsf aqpsgislsp dlmeayvads
      781 esssiraldl ktggsrllag gdpvfsenlf rfgdhdgigs dvllqhplgv lcakdgqiyi
      841 adsynhkikk ldpaskrvtt lagtgkagfk dgkalaaqls epsgiieaen grliiadtnn
      901 sliryldlnk enaeiltlel kgvqpptpks kslrrirkrs sadtqtivvn ggsssegnly
      961 lkislpeeyh fskvsssvlp p
//
LOCUS       XP_016685490             199 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH149 [Gossypium hirsutum].
ACCESSION   XP_016685490
VERSION     XP_016685490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..199
                     /product="transcription factor bHLH149"
                     /calculated_mol_wt=22449
     Region          123..175
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(130..131,134,137..138,141,150..151,154..155,158,161,
                     164..165,168,171..172,174..175)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..199
                     /gene="LOC107903828"
                     /coded_by="XM_016830001.2:340..939"
                     /db_xref="GeneID:107903828"
ORIGIN      
        1 masftpnlep apdtslqfkp kkpritlqtp sscppnqriq rikrwrtqrd qhiyssklfq
       61 alrrsrrtsa srevhetadr vlavlakgtt rwgrailtar kvtkhkkakl ptnnrlrkpd
      121 iyrerrktpa verklkvlgr lvpgcrklsf snlieetsdy iaalemqvra mtaiteflcg
      181 gtgggpqppa drlpsnvns
//
LOCUS       XP_016674304             607 aa            linear   PLN 06-AUG-2024
DEFINITION  rhodanese-like domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016674304
VERSION     XP_016674304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818815.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..607
                     /product="rhodanese-like domain-containing protein 6"
                     /calculated_mol_wt=67024
     Region          8..304
                     /region_name="TrhO"
                     /note="tRNA U34 5'-hydroxylase TrhO, rhodanese family
                     [Translation, ribosomal structure and biogenesis];
                     COG1054"
                     /db_xref="CDD:440674"
     Region          366..595
                     /region_name="FSH1"
                     /note="Serine hydrolase (FSH1); pfam03959"
                     /db_xref="CDD:461110"
     CDS             1..607
                     /gene="LOC107893745"
                     /coded_by="XM_016818815.2:109..1932"
                     /db_xref="GeneID:107893745"
ORIGIN      
        1 mskdefgvll yykfasipdl nslfsfyhsn cnslgllgrv rlspngvnvt vgglllalek
       61 hieavksnsl fqgtdfkvas shhplndkva vecgftslsi rvvkelvtfs sypllnppev
      121 snagrhlsaa efhsvlqsag qlmkngsptd dnqlvlldar nlyetrigkf hapsvetldp
      181 girqysdlps widdnseqlr gkhvlmyctg gircemasay irskgagfen vfqlyggiqr
      241 yleqfpdggf frgknfvfdh risvgssdts imgaclicgs sydnyssrcr cthcrilvli
      301 cdscqiksda yvcelclkhg mdfgsipsve dgelatvldk ndlktvcsds kisshlpsrn
      361 gnaaprklri lclhgfrqna scfkgrsasl akklksiael vfidaphelp fiyqssteak
      421 nscapptgqh apppenckrk yawlvasdfg gkveadwkia nqpfdplqyq gqtdgfdvsl
      481 aylkkmfseq gpfdgilgfs qgaamaallc aqgdklkaei dlrfvilcsg falpladfwq
      541 kpincpslhi fgsdprkdrq itshtsryla srfedgcsvi iehefghiip trspymdnik
      601 dflrrfl
//
LOCUS       XP_016674299             634 aa            linear   PLN 06-AUG-2024
DEFINITION  alkaline/neutral invertase A, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016674299
VERSION     XP_016674299.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818810.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674299.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..634
                     /product="alkaline/neutral invertase A, mitochondrial"
                     /calculated_mol_wt=71108
     Region          157..591
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; pfam12899"
                     /db_xref="CDD:432863"
     CDS             1..634
                     /gene="LOC107893742"
                     /coded_by="XM_016818810.2:210..2114"
                     /db_xref="GeneID:107893742"
ORIGIN      
        1 mnnlvslcns tmklpsrvlt lrnasvvgfr hlyntpcdqk ltfkskasfs fnqnsqfhaf
       61 pspflafqgv inntqklicl tsssfglhst vsrpygvpie asavetdknp erlcvkncnn
      121 akpqedeniv ggevpgaeyg nsraslesei dkeawsllrd avvtycgfpv gtvasndpgd
      181 khplnydqvf irdfvpsala fllggegeiv rnfllhtlql qstektvdcy spgqglmpvs
      241 fkvrtvplgd nkfeevidph fggsaigrva pvgsglwwii llraygkisg dyklqeredf
      301 qtgikmilnl cladgfdmfp sllvtdgscm idrkmgvhgh pleiqaltya alrcsremlt
      361 vnecsknlmt ainnrlsals fhireyywvd lkktneiyry kteeysmdat nkfniypeqi
      421 ppwlidwipe dggylignlq pahmdfrfft lgnlwsliss latpkqneai lklieakwdd
      481 ivghmplkic ypaleneewr ivtgsdpknt pwsfhnggsw pallwqftla cikmgkiela
      541 qkavglaekk lsvdrwpeyy dtpsgkfvgk qsriyqtwai agfltsrmml ekpdmasllf
      601 weednellen cvcaltkggr kicsrdvaks qilv
//
LOCUS       XP_016674301             477 aa            linear   PLN 06-AUG-2024
DEFINITION  intermediate cleaving peptidase 55, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016674301
VERSION     XP_016674301.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818812.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674301.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..477
                     /product="intermediate cleaving peptidase 55,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=53164
     Region          57..173
                     /region_name="AMP_N"
                     /note="Aminopeptidase P, N-terminal domain; pfam05195"
                     /db_xref="CDD:461581"
     Region          217..450
                     /region_name="Prolidase"
                     /note="E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase,
                     X-Pro dipeptidase, proline dipeptidase., imidodipeptidase,
                     peptidase D, gamma-peptidase. Catalyses hydrolysis of
                     Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline
                     analogs. No action on Pro-Pro; cd01087"
                     /db_xref="CDD:238520"
     Site            order(279,296,307,385,412,435)
                     /site_type="active"
                     /db_xref="CDD:238520"
     CDS             1..477
                     /gene="LOC107893743"
                     /coded_by="XM_016818812.2:357..1790"
                     /db_xref="GeneID:107893743"
ORIGIN      
        1 mkilsrkllh qlsfkqairr ctystgkvsd fgqptsashp qlmkegeitp giatkeyisr
       61 qkrllellpe nslaiiaaap vkmmtdvvpy tfqqdadyly ltgcqqpggv avlshecglc
      121 mfmpepkphd avwqgqiagv daalemfkae eaypvskldk ilpnmikrss klfhnkltat
      181 ptytdletfq naahvrkvsd lslfthelrw vkspselklm kesaaiacqa llqtmlhskt
      241 yphesmlsak veyecrmrga qrmafnpvvg ggpnasvihy srndqkikdg dlvlmdvgce
      301 lhgycsdltr twppcgsfss iqeelydlil qtnkecirlc rpgasirqih nysvellckg
      361 lkeigilkrd afrlyhqlnp tsighylgmd vhdssmisyd cplkpgvvit iepgiyvpss
      421 fdgseryqgt giriedevli tetgcevltg smpkeikhie sllndysytk gmeaatv
//
LOCUS       XP_016674302             441 aa            linear   PLN 06-AUG-2024
DEFINITION  intermediate cleaving peptidase 55, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016674302
VERSION     XP_016674302.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818813.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674302.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..441
                     /product="intermediate cleaving peptidase 55,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=49129
     Region          21..137
                     /region_name="AMP_N"
                     /note="Aminopeptidase P, N-terminal domain; pfam05195"
                     /db_xref="CDD:461581"
     Region          181..414
                     /region_name="Prolidase"
                     /note="E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase,
                     X-Pro dipeptidase, proline dipeptidase., imidodipeptidase,
                     peptidase D, gamma-peptidase. Catalyses hydrolysis of
                     Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline
                     analogs. No action on Pro-Pro; cd01087"
                     /db_xref="CDD:238520"
     Site            order(243,260,271,349,376,399)
                     /site_type="active"
                     /db_xref="CDD:238520"
     CDS             1..441
                     /gene="LOC107893743"
                     /coded_by="XM_016818813.2:563..1888"
                     /db_xref="GeneID:107893743"
ORIGIN      
        1 mftsqlmkeg eitpgiatke yisrqkrlle llpenslaii aaapvkmmtd vvpytfqqda
       61 dylyltgcqq pggvavlshe cglcmfmpep kphdavwqgq iagvdaalem fkaeeaypvs
      121 kldkilpnmi krssklfhnk ltatptytdl etfqnaahvr kvsdlslfth elrwvkspse
      181 lklmkesaai acqallqtml hsktyphesm lsakveyecr mrgaqrmafn pvvgggpnas
      241 vihysrndqk ikdgdlvlmd vgcelhgycs dltrtwppcg sfssiqeely dlilqtnkec
      301 irlcrpgasi rqihnysvel lckglkeigi lkrdafrlyh qlnptsighy lgmdvhdssm
      361 isydcplkpg vvitiepgiy vpssfdgser yqgtgiried evlitetgce vltgsmpkei
      421 khiesllndy sytkgmeaat v
//
LOCUS       XP_016674303             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674303
VERSION     XP_016674303.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818814.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16640
     Region          28..138
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..150
                     /gene="LOC107893744"
                     /coded_by="XM_016818814.2:505..957"
                     /db_xref="GeneID:107893744"
ORIGIN      
        1 mslvteeika sasevyhgde icqvksksll eemgmprgll plkdieecgy vketgfvwlk
       61 qkksithkfe kigkpvsyat evtavieknr ikklngvksk elliwvtlsd iyvddpatgk
      121 itfktpagls rsypvsafei egeesskekn
//
LOCUS       XP_016674298             338 aa            linear   PLN 06-AUG-2024
DEFINITION  galactinol synthase 2 [Gossypium hirsutum].
ACCESSION   XP_016674298
VERSION     XP_016674298.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818809.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674298.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..338
                     /product="galactinol synthase 2"
                     /calculated_mol_wt=38396
     Region          1..338
                     /region_name="PLN00176"
                     /note="galactinol synthase"
                     /db_xref="CDD:215090"
     Site            order(97..98,101,115,117..119,142,182..184,212..213,
                     235..236,254,256,258,261)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(117,119,254)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(141..142,213,226,228..229,233,237)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..338
                     /gene="LOC107893739"
                     /coded_by="XM_016818809.2:313..1329"
                     /db_xref="GeneID:107893739"
ORIGIN      
        1 mapnitttka atitakaper ayvtflagng dyvkgvvgla kglrkvnsky plvvallpdv
       61 pedhrkilvd qgciirqiep vyppenqtqf amayyvinys klriwefvey skmiyldgdi
      121 qvfdnidhlf dmedgyfyav mdcfcektws htpqykigyc qqcpdkvqwp sqlgpkpply
      181 fnagmfvyep slstykdllt tlkvtpptpf aeqdylnmyf kdiyrpippi ynlvmamlwr
      241 hpenieldka kvvhycaags kpwrytgked nmdrediktl vakwweiydd esldynnvva
      301 sgqaaetdgd kqsglqllla alskaggfvh rinapsaa
//
LOCUS       XP_016730353             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B [Gossypium hirsutum].
ACCESSION   XP_016730353
VERSION     XP_016730353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874864.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B"
                     /calculated_mol_wt=20519
     Region          1..181
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107941301"
                     /coded_by="XM_016874864.2:229..774"
                     /db_xref="GeneID:107941301"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 a
//
LOCUS       XP_016730352             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B [Gossypium hirsutum].
ACCESSION   XP_016730352
VERSION     XP_016730352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B"
                     /calculated_mol_wt=20519
     Region          1..181
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107941301"
                     /coded_by="XM_016874863.2:313..858"
                     /db_xref="GeneID:107941301"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 a
//
LOCUS       XP_016674295             593 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase haspin homolog [Gossypium
            hirsutum].
ACCESSION   XP_016674295
VERSION     XP_016674295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818806.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..593
                     /product="serine/threonine-protein kinase haspin homolog"
                     /calculated_mol_wt=66520
     Region          253..581
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..593
                     /gene="LOC107893736"
                     /coded_by="XM_016818806.2:154..1935"
                     /db_xref="GeneID:107893736"
ORIGIN      
        1 mdgkakarsg gevdlwseii gasdqpstna pliqpvyqrr rrtshptpsd sdhplllqpt
       61 nsnrlsfaaa nnkrvswnrs lsirgrisia vapclanqpq qkqprrrgkp pvpkgkaaeq
      121 ssfdkerayf qevdafelle espspkhfgt watgnqtvtd piplvstrle kwlfskkinf
      181 scgpsttlsk iletpaapmd piytsgldls svktpekfsp vsligadqgc edinaaikkl
      241 slaskstssh ldridpftal lgiceqpkpm kfldlfskyc apesiakige gtygeafrag
      301 ntvckivpfd gdfpvngelq kkseelleea vlsqvlnslr efekndsnac ttfietidlk
      361 vcqgsydaal irawekwdek ngsendhpke fpekqrylvf vlqhggkdle sfvlenfdet
      421 rsllvqvtaa lavaeaayef ehrdlhwgnl llsrngsvtv kfilegkqis frtyglsvsi
      481 idftlsrint genilfldls qdpylfkgpk gdkqsetyrk mkevtedhwe gsfprtnvlw
      541 lvylvdilll kktyvrcskn erdmrslkkr ldkydsakea ildpffedlf vnn
//
LOCUS       XP_016674290             344 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear envelope-associated protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674290
VERSION     XP_016674290.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818801.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674290.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="nuclear envelope-associated protein 2 isoform
                     X1"
                     /calculated_mol_wt=39406
     Region          22..>314
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..344
                     /gene="LOC107893735"
                     /coded_by="XM_016818801.2:393..1427"
                     /db_xref="GeneID:107893735"
ORIGIN      
        1 msvsnqsslp sssssmdfdp llkdlnekkq sfrrnvvsla aelkevrsrl asqeqsfaqe
       61 tltrqeaetk arhmeeeifk lqtrleerng qlqasasaae kylrelddlr sqlsvtqata
      121 dasaasaqsa qlqcvtllke ldeknkslke hedrvtrlge qldnlqkdlq arecsqkllk
      181 devlriehdi mqavaragan kdcelrklld efspknfeki nklltvkdee itklkdeiri
      241 msahwklktk elesqlekqr radqelkkrv lklefclqea rsqtrklqrm gerrdkalke
      301 lrdqlaakqq sggvgaekqn fwetsgfkiv vsmsmlilvv fskr
//
LOCUS       XP_016674292             344 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear envelope-associated protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674292
VERSION     XP_016674292.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818803.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674292.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="nuclear envelope-associated protein 2 isoform
                     X1"
                     /calculated_mol_wt=39406
     Region          22..>314
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..344
                     /gene="LOC107893735"
                     /coded_by="XM_016818803.2:390..1424"
                     /db_xref="GeneID:107893735"
ORIGIN      
        1 msvsnqsslp sssssmdfdp llkdlnekkq sfrrnvvsla aelkevrsrl asqeqsfaqe
       61 tltrqeaetk arhmeeeifk lqtrleerng qlqasasaae kylrelddlr sqlsvtqata
      121 dasaasaqsa qlqcvtllke ldeknkslke hedrvtrlge qldnlqkdlq arecsqkllk
      181 devlriehdi mqavaragan kdcelrklld efspknfeki nklltvkdee itklkdeiri
      241 msahwklktk elesqlekqr radqelkkrv lklefclqea rsqtrklqrm gerrdkalke
      301 lrdqlaakqq sggvgaekqn fwetsgfkiv vsmsmlilvv fskr
//
LOCUS       XP_016674294             280 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear envelope-associated protein 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674294
VERSION     XP_016674294.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818805.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674294.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..280
                     /product="nuclear envelope-associated protein 2 isoform
                     X2"
                     /calculated_mol_wt=32236
     Region          <2..>250
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..280
                     /gene="LOC107893735"
                     /coded_by="XM_016818805.2:493..1335"
                     /db_xref="GeneID:107893735"
ORIGIN      
        1 meaetkarhm eeeifklqtr leerngqlqa sasaaekylr elddlrsqls vtqatadasa
       61 asaqsaqlqc vtllkeldek nkslkehedr vtrlgeqldn lqkdlqarec sqkllkdevl
      121 riehdimqav aragankdce lrklldefsp knfekinkll tvkdeeitkl kdeirimsah
      181 wklktkeles qlekqrradq elkkrvlkle fclqearsqt rklqrmgerr dkalkelrdq
      241 laakqqsggv gaekqnfwet sgfkivvsms mlilvvfskr
//
LOCUS       XP_016686242             395 aa            linear   PLN 06-AUG-2024
DEFINITION  pectin acetylesterase 12 [Gossypium hirsutum].
ACCESSION   XP_016686242
VERSION     XP_016686242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..395
                     /product="pectin acetylesterase 12"
                     /calculated_mol_wt=44134
     Region          43..374
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..395
                     /gene="LOC107904397"
                     /coded_by="XM_016830753.2:469..1656"
                     /db_xref="GeneID:107904397"
ORIGIN      
        1 mmklswvwiv iaiaflqlvt gfldfnetel slieaydygv sklnynplmv gltliasasa
       61 kgavcldgtl pgyhwhrgyg sgannwlihl egggwcnnvr tcvyrkktrr gsstymekqi
      121 pftgilsdka dqnpdffnwn rvkvrycdga sftgdtknka aklqfrgqri wlaatedlms
      181 rgmrnakqal lsgcsaggla silhcdefrn mfprtskvkc lsdaglflda vdvsggrtlr
      241 slyngvvglq cffpqnlisn irtplfilna aydswqiqss iappsadphg ywhecrlnha
      301 kcsasqmrfl qgfriemlnv ikgfsqsren glfinscfah cqterqdtwf aanspeirnk
      361 aiaiavgdwy fdragvkvid cpypcdksch nlvfk
//
LOCUS       XP_040941985             414 aa            linear   PLN 06-AUG-2024
DEFINITION  flap endonuclease 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040941985
VERSION     XP_040941985.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086051.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..414
                     /product="flap endonuclease 1 isoform X1"
                     /calculated_mol_wt=46245
     Region          1..363
                     /region_name="PTZ00217"
                     /note="flap endonuclease-1; Provisional"
                     /db_xref="CDD:240317"
     Site            order(7,34,36..37,40,42,44..48,54..55,62,66,70..71,74,87,
                     94,101,129,134,159,161,180,182,193,196,316..319,322)
                     /site_type="active"
                     /db_xref="CDD:350215"
     Site            order(28..30,81,168..170,209,211..212,274..275,302)
                     /site_type="other"
                     /note="FEN1-PCNA interface [polypeptide binding]"
                     /db_xref="CDD:350215"
     Site            order(45..48,62,66,70..71,74,196,316,318..319,322,325,329)
                     /site_type="other"
                     /note="3' dsDNA binding site [nucleotide binding]"
                     /db_xref="CDD:350215"
     Site            order(93..98,133..136)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350215"
     CDS             1..414
                     /gene="LOC107895056"
                     /coded_by="XM_041086051.1:146..1390"
                     /db_xref="GeneID:107895056"
ORIGIN      
        1 mgikgltkll adnapnvmke qklesyigrk iaidasmsif qflivvgrrg temltneage
       61 vtshlqgmft rtirlleagm epiyvfdghp pdlkkkvlvk ryskranate dlhqaietgn
      121 kddiekfskr tvkvtkqhne dckrllrlmg vpvieapsea eaqcaalcks gkvyavased
      181 mdsltfgapr flrhlmgpgs rkvpvlefev gkvleelnlt mdqfidlcil sgcdycesir
      241 giggqtalkl irqqgsiehi lqninkeryp ipddwpyeea rylfkeplvc tnieqfemkr
      301 sapddeglit flvtengfns drvtkaieki kaaknkssqg qlesfsksva nisipiktka
      361 tksmlqfpks mfnskifspq dsicsrpkgf ssmaplclhf khsmvfsrgv cygi
//
LOCUS       XP_040941986             380 aa            linear   PLN 06-AUG-2024
DEFINITION  flap endonuclease 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040941986
VERSION     XP_040941986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086052.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..380
                     /product="flap endonuclease 1 isoform X2"
                     /calculated_mol_wt=42618
     Region          1..325
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     Site            order(7,34,36..37,40,42,44..48,54..55,62,66,70..71,74,87,
                     94,101,129,134,159,161,180,182,193,196,316..319,322)
                     /site_type="active"
                     /db_xref="CDD:350215"
     Site            order(28..30,81,168..170,209,211..212,274..275,302)
                     /site_type="other"
                     /note="FEN1-PCNA interface [polypeptide binding]"
                     /db_xref="CDD:350215"
     Site            order(45..48,62,66,70..71,74,196,316,318..319,322,325)
                     /site_type="other"
                     /note="3' dsDNA binding site [nucleotide binding]"
                     /db_xref="CDD:350215"
     Site            order(93..98,133..136)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350215"
     CDS             1..380
                     /gene="LOC107895056"
                     /coded_by="XM_041086052.1:147..1289"
                     /db_xref="GeneID:107895056"
ORIGIN      
        1 mgikgltkll adnapnvmke qklesyigrk iaidasmsif qflivvgrrg temltneage
       61 vtshlqgmft rtirlleagm epiyvfdghp pdlkkkvlvk ryskranate dlhqaietgn
      121 kddiekfskr tvkvtkqhne dckrllrlmg vpvieapsea eaqcaalcks gkvyavased
      181 mdsltfgapr flrhlmgpgs rkvpvlefev gkvleelnlt mdqfidlcil sgcdycesir
      241 giggqtalkl irqqgsiehi lqninkeryp ipddwpyeea rylfkeplvc tnieqfemkr
      301 sapddeglit flvtengfns drvtkatksm lqfpksmfns kifspqdsic srpkgfssma
      361 plclhfkhsm vfsrgvcygi
//
LOCUS       XP_040941987             362 aa            linear   PLN 06-AUG-2024
DEFINITION  flap endonuclease 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040941987
VERSION     XP_040941987.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086053.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..362
                     /product="flap endonuclease 1 isoform X3"
                     /calculated_mol_wt=40510
     Region          2..311
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     Site            order(41..46,81..84)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350215"
     CDS             1..362
                     /gene="LOC107895056"
                     /coded_by="XM_041086053.1:173..1261"
                     /db_xref="GeneID:107895056"
ORIGIN      
        1 mltneagevt shlqgmftrt irlleagmep iyvfdghppd lkkkvlvkry skranatedl
       61 hqaietgnkd diekfskrtv kvtkqhnedc krllrlmgvp vieapseaea qcaalcksgk
      121 vyavasedmd sltfgaprfl rhlmgpgsrk vpvlefevgk vleelnltmd qfidlcilsg
      181 cdycesirgi ggqtalklir qqgsiehilq ninkerypip ddwpyeeary lfkeplvctn
      241 ieqfemkrsa pddeglitfl vtengfnsdr vtkaiekika aknkssqgql esfsksvani
      301 sipiktkatk smlqfpksmf nskifspqds icsrpkgfss maplclhfkh smvfsrgvcy
      361 gi
//
LOCUS       XP_040941989             347 aa            linear   PLN 06-AUG-2024
DEFINITION  flap endonuclease 1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040941989
VERSION     XP_040941989.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086055.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..347
                     /product="flap endonuclease 1 isoform X4"
                     /calculated_mol_wt=38858
     Region          1..340
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     Site            order(7,34,36..37,40,42,44..48,54..55,62,66,70..71,74,87,
                     94,101,129,134,159,161,180,182,193,196,316..319,322)
                     /site_type="active"
                     /db_xref="CDD:350215"
     Site            order(28..30,81,168..170,209,211..212,274..275,302)
                     /site_type="other"
                     /note="FEN1-PCNA interface [polypeptide binding]"
                     /db_xref="CDD:350215"
     Site            order(45..48,62,66,70..71,74,196,316,318..319,322,325,329)
                     /site_type="other"
                     /note="3' dsDNA binding site [nucleotide binding]"
                     /db_xref="CDD:350215"
     Site            order(93..98,133..136)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350215"
     CDS             1..347
                     /gene="LOC107895056"
                     /coded_by="XM_041086055.1:147..1190"
                     /db_xref="GeneID:107895056"
ORIGIN      
        1 mgikgltkll adnapnvmke qklesyigrk iaidasmsif qflivvgrrg temltneage
       61 vtshlqgmft rtirlleagm epiyvfdghp pdlkkkvlvk ryskranate dlhqaietgn
      121 kddiekfskr tvkvtkqhne dckrllrlmg vpvieapsea eaqcaalcks gkvyavased
      181 mdsltfgapr flrhlmgpgs rkvpvlefev gkvleelnlt mdqfidlcil sgcdycesir
      241 giggqtalkl irqqgsiehi lqninkeryp ipddwpyeea rylfkeplvc tnieqfemkr
      301 sapddeglit flvtengfns drvtkaieki kaaknkssqg qsvrvif
//
LOCUS       XP_016675454             217 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein subfamily 2 member 1 [Gossypium hirsutum].
ACCESSION   XP_016675454
VERSION     XP_016675454.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819965.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..217
                     /product="germin-like protein subfamily 2 member 1"
                     /calculated_mol_wt=23131
     Region          22..213
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(24,28..29,55..59,61..62,78,83,90..93,113,115,117,
                     119,125,127,129,135,137,139,142..146,148,151,166,168,170)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(75,94,96,104,107,109,114,153,165,169,176)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..217
                     /gene="LOC107894723"
                     /coded_by="XM_016819965.2:64..717"
                     /db_xref="GeneID:107894723"
ORIGIN      
        1 mrvfpalfla slalvlgasr adpdllqdvc vadlssgikl ngfpckhpst igandfffag
       61 lanpnfpnnt lgslvtaanv ekipglntlg vsmsridyav ggvnpphthp raseiafvle
      121 gelevgfftt snvliskhik kgeifvfpkg lmhfqknigk trasaitafd sqfsgtqsia
      181 ttlfaaspti pndvlskafq ihpreverik vkltpkk
//
LOCUS       XP_016675742             189 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin F-type, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016675742
VERSION     XP_016675742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820253.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..189
                     /product="thioredoxin F-type, chloroplastic"
                     /calculated_mol_wt=20336
     Region          90..184
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(113,116)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..189
                     /gene="LOC107895054"
                     /coded_by="XM_016820253.2:235..804"
                     /db_xref="GeneID:107895054"
ORIGIN      
        1 msllqssvyp pstlrsspsl sctaahpias shrvpstsns fvalessslk tvnsissakn
       61 nrrkgvvgkv rssletagat vgqvtevtkd tfwpivnaag dktvvldmyt qwcgpckvia
      121 pkfqelseky ldvvflkldc nqenkplake lgirvvptfk ilkhnkivke vtgakyddlv
      181 aaidtvrat
//
LOCUS       XP_040941990             505 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYTOCHROME KINASE SUBSTRATE 4 [Gossypium hirsutum].
ACCESSION   XP_040941990
VERSION     XP_040941990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086056.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..505
                     /product="protein PHYTOCHROME KINASE SUBSTRATE 4"
                     /calculated_mol_wt=54581
     CDS             1..505
                     /gene="LOC107895053"
                     /coded_by="XM_041086056.1:94..1611"
                     /db_xref="GeneID:107895053"
ORIGIN      
        1 mmmtmmmeka ramktmnggg sqehfleqeq eqeeelkpal syninsfpqq ktnlgvdvsa
       61 dedteisifd akryfsesns dsrvckrvsp lnipnpvhva sepgaalagr fssassaadg
      121 cgygrtyrvr sfhatptpss easwnsqtgl lanpagaiav smtttddkrk gsgklrrlwr
      181 rscpcsgkks vqvepnkpqs fkvdgdrstg tqsassgidh krremlqtcn prciseenhe
      241 fhsslgvqrv vatttrvplm itngsgtagf tfpilnqvqp ksshvkmvvn insssldnhe
      301 dppresldvf lppddssisv pkklvsriti adddaasdts sdlfeiesls tttqghstsh
      361 pmynnrrdsl ddalnfntir siaaacngsg fgcqyssmmt dccyepseas iewsvttaeg
      421 fergsvgvse aeemhgnyky ngigkggrqk sgnggllscr sekavsvgpy pvkyvppqgq
      481 aditlkhvsn vnnpplsrls ipfsa
//
LOCUS       XP_016675738             283 aa            linear   PLN 06-AUG-2024
DEFINITION  biotin carboxyl carrier protein of acetyl-CoA carboxylase,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675738
VERSION     XP_016675738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..283
                     /product="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase, chloroplastic isoform X1"
                     /calculated_mol_wt=29304
     Region          2..283
                     /region_name="PLN02983"
                     /note="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase"
                     /db_xref="CDD:215533"
     CDS             1..283
                     /gene="LOC107895051"
                     /coded_by="XM_016820249.2:202..1053"
                     /db_xref="GeneID:107895051"
ORIGIN      
        1 masslstpps aslssvvktt atlpflslsk vsfrfssrpn lrffsklqsl qtgqndsavv
       61 kaqlneisvd gssndstipp vnsgsstpep qdakpssnvs ppalateesi seflnqvssl
      121 vklvdsrdiv elqlkqldce liicknvalp qppsaapvam sqasslppvg pptqtapasa
      181 pttsgqapav atppsfpapk saksllpplk cpmagtfyts pgpgeppfvk vgdkvqkgqv
      241 lciieamklm neieadqsgt iveilvedgk avsvdtplfv iep
//
LOCUS       XP_016675739             281 aa            linear   PLN 06-AUG-2024
DEFINITION  biotin carboxyl carrier protein of acetyl-CoA carboxylase,
            chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675739
VERSION     XP_016675739.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820250.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..281
                     /product="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase, chloroplastic isoform X2"
                     /calculated_mol_wt=29062
     Region          2..281
                     /region_name="PLN02983"
                     /note="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase"
                     /db_xref="CDD:215533"
     CDS             1..281
                     /gene="LOC107895051"
                     /coded_by="XM_016820250.2:202..1047"
                     /db_xref="GeneID:107895051"
ORIGIN      
        1 masslstpps aslssvvktt atlpflslsk vsfrfssrpn lrffskslqt gqndsavvka
       61 qlneisvdgs sndstippvn sgsstpepqd akpssnvspp alateesise flnqvsslvk
      121 lvdsrdivel qlkqldceli icknvalpqp psaapvamsq asslppvgpp tqtapasapt
      181 tsgqapavat ppsfpapksa ksllpplkcp magtfytspg pgeppfvkvg dkvqkgqvlc
      241 iieamklmne ieadqsgtiv eilvedgkav svdtplfvie p
//
LOCUS       XP_016675740             173 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675740
VERSION     XP_016675740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820251.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..173
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19232
     Region          28..134
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..173
                     /gene="LOC107895052"
                     /coded_by="XM_016820251.2:150..671"
                     /db_xref="GeneID:107895052"
ORIGIN      
        1 mripilslfp alfltfflta hsppssiydh lkhnglpigl lpkgisdfsi dpntnrfhvn
       61 ltqpcnsefe iqlhydfnis gvlsfgkian lsgvsqqelf lwfpvinirv ddptsglinf
      121 dvgvvdkqfs lslfeiprdc tafdpkgslf isekpsellg teiveehmlr ais
//
LOCUS       XP_016675737              72 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import receptor subunit TOM7-1 [Gossypium hirsutum].
ACCESSION   XP_016675737
VERSION     XP_016675737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..72
                     /product="mitochondrial import receptor subunit TOM7-1"
                     /calculated_mol_wt=7750
     Region          30..69
                     /region_name="Tom7"
                     /note="TOM7 family; pfam08038"
                     /db_xref="CDD:462344"
     CDS             1..72
                     /gene="LOC107895050"
                     /coded_by="XM_016820248.2:54..272"
                     /db_xref="GeneID:107895050"
ORIGIN      
        1 masrvslktk gkggkgskgs ddksttqclk ewstwamkka kvvthygfip lviiigmnse
       61 pkpqlyqlls pv
//
LOCUS       XP_016675735            1186 aa            linear   PLN 06-AUG-2024
DEFINITION  probable manganese-transporting ATPase PDR2 [Gossypium hirsutum].
ACCESSION   XP_016675735
VERSION     XP_016675735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820246.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1186
                     /product="probable manganese-transporting ATPase PDR2"
                     /calculated_mol_wt=131637
     Region          170..1102
                     /region_name="P-type_ATPase_cation"
                     /note="P-type cation-transporting ATPases, similar to
                     human cation-transporting ATPase type 13A1 (ATP13A1) and
                     Saccharomyces manganese-transporting ATPase 1 Spf1p;
                     cd07543"
                     /db_xref="CDD:319843"
     Site            order(490..492,583,605..607,637,698..700,786,789,792,811,
                     814)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319843"
     Site            order(960,964..965,967..968,995,998..999)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319843"
     CDS             1..1186
                     /gene="LOC107895049"
                     /coded_by="XM_016820246.2:151..3711"
                     /db_xref="GeneID:107895049"
ORIGIN      
        1 msrfhvggkv vdkvdllrkk haawrldvwp famlyllwlt mvvpsidfvd aaivlgglav
       61 thilvllftt wsvdfkcfvq yskvnnirla dvckvtpakf cgskevvplh irkqiassss
      121 akdveeiyfd frkqcfiysk eedtfcklpy ptketfgyyl kcsghgsdak vlaatekwgr
      181 nvfeypqptf qklmkehcme pffvfqvfcv glwcldeywy yslftlfmlf mfestmaksr
      241 lktlselrrv rvdsqtlmvh rcgkwvklsg tdllpgdvvs igrssgqnee dksvpadmli
      301 lagsaivnea iltgestpqw kvsiagrgie eklsakrdkn hmlfggtkil qhtadksfpv
      361 rtpdggclav vlrtgfetsq gklmrtilfs tervtanswe sglfilflvv faiiaagyvl
      421 kkgledptrs kyklflscsl iitsvippel pmelsiavnt slialarrgi fctepfripf
      481 agkvdiccfd ktgtltsddm efsgvvglnd sselesdmtk vpsrtveila schalvfvdn
      541 klvgdpleka alkgidwsyk sdekaipkkg sgnpvqiaqr hhfashlkrm avvvrvqedf
      601 fsfvkgapet iqdrlidlpp tyvetykkyt rqgsrvlala ykslpdmtvs earsmerdtv
      661 ecgltfagfa vfncpirads ltvlselkns shdlvmitgd qaltachvag qvnivsklal
      721 ilvavknskg yewvspdete ripyseneve alsethdlci ggdcfemlqq tsavlrvipf
      781 vkvfarvape qkelimttfk tvgrltlmcg dgtndvgalk qahvgvalln avpptksess
      841 sgtskdentk slkskkskpt veatgnseas skgkvvprse ssnnatsnrh lnaaekhrqk
      901 lkkmmdelne egdgrsapiv klgdasmasp ftakhasvap ttdiirqgrs tlvttlqmfk
      961 ilglnclata yvlsvmyldg vklgdvqati sgvftaaffl fisharplpt lsaarphpni
     1021 fcsyvflslm gqfamhllfl issvkeaekh mpeeciepes efhpnlvntv symvsmmlqv
     1081 atfavnymgh pfnqsipenk pflyalgaaa gffvvitsdi frdlndwlsl vplpvglrdk
     1141 lliwallmfl ccyawerllr wafpgkipaw rkrqrvaaas sekklv
//
LOCUS       XP_016675732            1132 aa            linear   PLN 06-AUG-2024
DEFINITION  type II inositol polyphosphate 5-phosphatase 15 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016675732
VERSION     XP_016675732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1132
                     /product="type II inositol polyphosphate 5-phosphatase 15
                     isoform X1"
                     /calculated_mol_wt=126174
     Region          <113..238
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          162..491
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(179,183,189,192,206..207,224,228,234..235,258..259,
                     293,298,304..305,317,345,350,384..385,402,406,412..413,
                     424..425,445,451..452,463..464,480,484,490..491)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          521..915
                     /region_name="INPP5c"
                     /note="Catalytic domain of inositol polyphosphate
                     5-phosphatases; cd09074"
                     /db_xref="CDD:197308"
     Site            order(527,529,558,659..660,680,683..684,787,789,791,
                     842..843,861,867,905..906)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197308"
     Site            order(527,558,680,787,789,867,905..906)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197308"
     Site            order(529,558,905)
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:197308"
     Site            order(558,659..660,680,683..684,791,842..843,861,905)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197308"
     Site            order(680,789,906)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197308"
     CDS             1..1132
                     /gene="LOC107895048"
                     /coded_by="XM_016820243.2:201..3599"
                     /db_xref="GeneID:107895048"
ORIGIN      
        1 mdanddvpdl sprifdryas ssdddshpsy pslhstnrrl dymiqfldrn llpqntsrpk
       61 pslpefvakg ggqgiftlpd rkplhpnrpp ylqlrphplr etqfgrflkt iastdgqlwa
      121 gsesgavrvw elkdlyeege eeeaapfres sailsngngn gnaavmcmvg degngvvwsg
      181 hkdgkirgwk mdcesggfke gwcwqahrgp vlsvvftcyg dlwsgseggn iriwpwesin
      241 nalslsmeer hmasslmgks fidlrsqvav ngfssilnsd ikcllsdnir akvwssgyls
      301 falwdartre llkvfnidgq ienradlslv pdfamedeik mkivasskke ktqssfgffq
      361 qsrnaimgaa davrrvaakg gflddsrrie altitidgmi wvgcangmli qwdgngnriq
      421 diqphpsavl clcsfrskiw agyasgtvha ldldgnklge wvahsspvlk maigagyiyt
      481 lakhggirgw sitspgpldg ilyseltakg flytrmenlt ilsgtwnvaq graskgsles
      541 wlhsavsdvg iiviglqeve mgagflamsa vresvgrdgs avgqwwldmi detlhdmmer
      601 ksqdvmgkqs hqwrkfervg srqlagmlia vwvkdnlkpd vgdidaaavp cgfgraignk
      661 gavglrlrvy drifcfvnch faahleavgr rnadfdhvyc tmtfsrqsnl fnagagmvly
      721 lllcctlacs iylfwlvyrs slplvlsiaa gassavqmvr ganatgansv egmpelsead
      781 mvvflgdfny rlddvsydea rdfisqrsfd wlrerdqlra emeagnvfqg mreavitfap
      841 tykfdkhvag lsgydsgekk ripawcdril yrdsrrtlgs ecslecpvis svsryescmd
      901 vtdsdhkpvi clftveiahi desvrrqefg divrsneevr cklqelckip etivstnnii
      961 lqnqdtsilr itnkctesia lfeivcqges tikddgqasy hhprgsfgfp rwlqvtpaag
     1021 iikpdhvaev svhieafhtq eefvdgvprn wwceddrdke allvvkvhgr ytmetrnhri
     1081 rvrhccstkm rktdpkprds vqtqgnllhr adyqklsvsf dvvdhlrnlh sp
//
LOCUS       XP_016675733            1098 aa            linear   PLN 06-AUG-2024
DEFINITION  type II inositol polyphosphate 5-phosphatase 15 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016675733
VERSION     XP_016675733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1098
                     /product="type II inositol polyphosphate 5-phosphatase 15
                     isoform X2"
                     /calculated_mol_wt=122353
     Region          <113..238
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          162..491
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(179,183,189,192,206..207,224,228,234..235,258..259,
                     293,298,304..305,317,345,350,384..385,402,406,412..413,
                     424..425,445,451..452,463..464,480,484,490..491)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          521..881
                     /region_name="INPP5c"
                     /note="Catalytic domain of inositol polyphosphate
                     5-phosphatases; cd09074"
                     /db_xref="CDD:197308"
     Site            order(527,529,558,659..660,680,683..684,753,755,757,
                     808..809,827,833,871..872)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197308"
     Site            order(527,558,680,753,755,833,871..872)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197308"
     Site            order(529,558,871)
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:197308"
     Site            order(558,659..660,680,683..684,757,808..809,827,871)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197308"
     Site            order(680,755,872)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197308"
     CDS             1..1098
                     /gene="LOC107895048"
                     /coded_by="XM_016820244.2:200..3496"
                     /db_xref="GeneID:107895048"
ORIGIN      
        1 mdanddvpdl sprifdryas ssdddshpsy pslhstnrrl dymiqfldrn llpqntsrpk
       61 pslpefvakg ggqgiftlpd rkplhpnrpp ylqlrphplr etqfgrflkt iastdgqlwa
      121 gsesgavrvw elkdlyeege eeeaapfres sailsngngn gnaavmcmvg degngvvwsg
      181 hkdgkirgwk mdcesggfke gwcwqahrgp vlsvvftcyg dlwsgseggn iriwpwesin
      241 nalslsmeer hmasslmgks fidlrsqvav ngfssilnsd ikcllsdnir akvwssgyls
      301 falwdartre llkvfnidgq ienradlslv pdfamedeik mkivasskke ktqssfgffq
      361 qsrnaimgaa davrrvaakg gflddsrrie altitidgmi wvgcangmli qwdgngnriq
      421 diqphpsavl clcsfrskiw agyasgtvha ldldgnklge wvahsspvlk maigagyiyt
      481 lakhggirgw sitspgpldg ilyseltakg flytrmenlt ilsgtwnvaq graskgsles
      541 wlhsavsdvg iiviglqeve mgagflamsa vresvgrdgs avgqwwldmi detlhdmmer
      601 ksqdvmgkqs hqwrkfervg srqlagmlia vwvkdnlkpd vgdidaaavp cgfgraignk
      661 gavglrlrvy drifcfvnch faahleavgr rnadfdhvyc tmtfsrqsnl fnagaagass
      721 avqmvrgana tgansvegmp elseadmvvf lgdfnyrldd vsydeardfi sqrsfdwlre
      781 rdqlraemea gnvfqgmrea vitfaptykf dkhvaglsgy dsgekkripa wcdrilyrds
      841 rrtlgsecsl ecpvissvsr yescmdvtds dhkpviclft veiahidesv rrqefgdivr
      901 sneevrcklq elckipetiv stnniilqnq dtsilritnk ctesialfei vcqgestikd
      961 dgqasyhhpr gsfgfprwlq vtpaagiikp dhvaevsvhi eafhtqeefv dgvprnwwce
     1021 ddrdkeallv vkvhgrytme trnhrirvrh ccstkmrktd pkprdsvqtq gnllhradyq
     1081 klsvsfdvvd hlrnlhsp
//
LOCUS       XP_040941991             886 aa            linear   PLN 06-AUG-2024
DEFINITION  type II inositol polyphosphate 5-phosphatase 15 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040941991
VERSION     XP_040941991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086057.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..886
                     /product="type II inositol polyphosphate 5-phosphatase 15
                     isoform X3"
                     /calculated_mol_wt=98809
     Region          275..669
                     /region_name="INPP5c"
                     /note="Catalytic domain of inositol polyphosphate
                     5-phosphatases; cd09074"
                     /db_xref="CDD:197308"
     Site            order(281,283,312,413..414,434,437..438,541,543,545,
                     596..597,615,621,659..660)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197308"
     Site            order(281,312,434,541,543,621,659..660)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197308"
     Site            order(283,312,659)
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:197308"
     Site            order(312,413..414,434,437..438,545,596..597,615,659)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197308"
     Site            order(434,543,660)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197308"
     CDS             1..886
                     /gene="LOC107895048"
                     /coded_by="XM_041086057.1:432..3092"
                     /db_xref="GeneID:107895048"
ORIGIN      
        1 meerhmassl mgksfidlrs qvavngfssi lnsdikclls dnirakvwss gylsfalwda
       61 rtrellkvfn idgqienrad lslvpdfame deikmkivas skkektqssf gffqqsrnai
      121 mgaadavrrv aakggfldds rriealtiti dgmiwvgcan gmliqwdgng nriqdiqphp
      181 savlclcsfr skiwagyasg tvhaldldgn klgewvahss pvlkmaigag yiytlakhgg
      241 irgwsitspg pldgilysel takgflytrm enltilsgtw nvaqgraskg sleswlhsav
      301 sdvgiivigl qevemgagfl amsavresvg rdgsavgqww ldmidetlhd mmerksqdvm
      361 gkqshqwrkf ervgsrqlag mliavwvkdn lkpdvgdida aavpcgfgra ignkgavglr
      421 lrvydrifcf vnchfaahle avgrrnadfd hvyctmtfsr qsnlfnagag mvlylllcct
      481 lacsiylfwl vyrsslplvl siaagassav qmvrganatg ansvegmpel seadmvvflg
      541 dfnyrlddvs ydeardfisq rsfdwlrerd qlraemeagn vfqgmreavi tfaptykfdk
      601 hvaglsgyds gekkripawc drilyrdsrr tlgsecslec pvissvsrye scmdvtdsdh
      661 kpviclftve iahidesvrr qefgdivrsn eevrcklqel ckipetivst nniilqnqdt
      721 silritnkct esialfeivc qgestikddg qasyhhprgs fgfprwlqvt paagiikpdh
      781 vaevsvhiea fhtqeefvdg vprnwwcedd rdkeallvvk vhgrytmetr nhrirvrhcc
      841 stkmrktdpk prdsvqtqgn llhradyqkl svsfdvvdhl rnlhsp
//
LOCUS       XP_016675747            1178 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion 1 protein 4 [Gossypium hirsutum].
ACCESSION   XP_016675747
VERSION     XP_016675747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820258.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1178
                     /product="sister chromatid cohesion 1 protein 4"
                     /calculated_mol_wt=129162
     Region          1..104
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          658..731
                     /region_name="Rad21_Rec8_M_AtSYN1-like"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; cd21793"
                     /db_xref="CDD:439295"
     Site            order(659..661,664..671,674,677..678,685..692,707,
                     710..715,723..724,726..731)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439295"
     Region          1119..1173
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..1178
                     /gene="LOC107895058"
                     /coded_by="XM_016820258.2:501..4037"
                     /db_xref="GeneID:107895058"
ORIGIN      
        1 mfysqfilak kgplgtiwia ahlerklrkn qvadtdigvs vdsilfpdvp ialrlsshll
       61 lgvvriysrk vnylfddcse allkikqafr stavdlppee stapyhsitl petfdlddfe
      121 lpdnevfhgn yvdhhvssre qitlqdtmdg mvystsqfgl derfgdgdts qiglldeelv
      181 ldrvsvpgdd gasvydhrgs nvpekedssn leavpidcig dqveglavns efgeydqdpg
      241 tpglvevhnl sgvhdplagg dhvqvepehh nhieldnsey vehasnksml phvddipvdq
      301 slqtnincda igsipqgnsl hgaaseeyks admtirepdg ldraedahys vmhsrdrtdg
      361 ecaespscsn vtfdledsar rtcssstcvp tsggylenyq ashksefgnd aettnnfees
      421 yspskatasn pscpfespsr ptvidgevqa cqelnnfenl krpvihedvs siqglvsenl
      481 vaagqnlvnl srreedfhps gacievqgea fqiqmsepaa yddhlessnn camsdlpape
      541 klltvpegpi vkpsdllgec tldkevpegn hevyagnkfi sckkrsites titvesmnsv
      601 esfrrpqfrt aesipddddl lssilvgrss vfkmkatpal evaslkrars aprrsatkrk
      661 vlmddsmvlh gdtirqqlvn tedihrirkk apctrpeisl iqrqfledei fsepiftgvs
      721 gdlaclhsgp ydlrgirise gdeihassev akdsgcserp nivegsdieg ssmpmnngnd
      781 tqaqsagtpi qayvqqgqys dlndlqdrna vdgvpellqh epldgimgmd ierdnvvvan
      841 aatcsvlnes eissptnlvn gdtgkmtave ttnsidgfil nnatcippdq kmntqpgeda
      901 seldmrneng tnlpevlehi nvqsinaaet esklleeskt gvevnlansc vpienrtdsf
      961 stiqtgefvn gaqngcetgy dkvgvvdeaq vegalsdhdd kdplckdsee ckmdstysek
     1021 vvlvlenasl ndgetpafqe vnavseerts lvdnqaeyed vaaandtefl nvdddelced
     1081 dddgmpcdes rllensgwss rtravakylq nlledealhg rkvlymdsll arktrkeasr
     1141 mffetlvlkt rdyihveqvk pfdnicikag aklvksdf
//
LOCUS       XP_016675748             494 aa            linear   PLN 06-AUG-2024
DEFINITION  O-acyltransferase WSD1 [Gossypium hirsutum].
ACCESSION   XP_016675748
VERSION     XP_016675748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820259.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..494
                     /product="O-acyltransferase WSD1"
                     /calculated_mol_wt=55923
     Region          37..482
                     /region_name="acyl_WS_DGAT"
                     /note="acyltransferase, WS/DGAT/MGAT; TIGR02946"
                     /db_xref="CDD:274360"
     Region          345..483
                     /region_name="WS_DGAT_C"
                     /note="WS/DGAT C-terminal domain; pfam06974"
                     /db_xref="CDD:462057"
     CDS             1..494
                     /gene="LOC107895059"
                     /coded_by="XM_016820259.2:94..1578"
                     /db_xref="GeneID:107895059"
ORIGIN      
        1 melerkngew iksgscdlgl rrikvrkesv deeeeplspm armfqqpesn vyiiamlgfk
       61 spidphflka nlvytflkhs rfssvqvade knggevkwvk tkvdldnhvk ipmvdqhmas
      121 pdqfvedyia nltnthists ipmwdvhiln lktcdaestl virvhhslgd gtslmsflis
      181 ccrktsepda lpsfpaakks rpdagwfwkc wsvlllawnt lvdiwmcvat tyflkdtqtp
      241 lkapsravaf tsrrimrrtf cvddvklvkn atnttvndvv laitqaglsr ylnrkygkgt
      301 gdgeswennl pnsirltatl finlrsspgi yaiakmvkkh sqtewgnkig yvlypfkial
      361 kdnpldyird akatmdrkka tleaqfrlfm akvfvrfypt klatfplttm wfsnvagpqe
      421 eislfgnqvt fiapslygqp valtihiisy ekkismvlsv deniipdpyq lcddfeealk
      481 likktivaeg likk
//
LOCUS       XP_016675762             358 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675762
VERSION     XP_016675762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39644
     CDS             1..358
                     /gene="LOC107895064"
                     /coded_by="XM_016820273.2:352..1428"
                     /db_xref="GeneID:107895064"
ORIGIN      
        1 megdlldwev lhnsdsdsns ilvnspqlrn legiegdtgg mirsdyfsld nqsmyakegd
       61 aseegsiesd npswidpkpe tqfrrnnsgd fwsdsgsdrs ddrklsdfsv kkdlesaene
      121 vclqgigkpe aradglgtfk pdgaefteld rikeldfggf gdiqdqnkdl gelwpdaggd
      181 glvsmkfkdv ekeasidfgd cmekgaemen sgeldnrnss tldlgvghgt tagnegstid
      241 emklsaksvn eeekkkvvww kvpfellryc vlrvspvwsf svaaavmgfv ilgrrlykmk
      301 rkssnlqlkv tmddkkvsqf mtraarlnea fsvvrrvpii rpslptagvn twsvmsmr
//
LOCUS       XP_016675457             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675457
VERSION     XP_016675457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819968.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..105
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12307
     CDS             1..105
                     /gene="LOC107894725"
                     /coded_by="XM_016819968.2:98..415"
                     /db_xref="GeneID:107894725"
ORIGIN      
        1 mylfyvlkqf kllknksell lntnwqllir vslsvssiii qahgdkfaak rmrrltqrra
       61 vdytstvvry mnyssikhhy cnsccsqfve shgyscwccf kpinl
//
LOCUS       XP_016675458             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675458
VERSION     XP_016675458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819969.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..104
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12311
     CDS             1..104
                     /gene="LOC107894725"
                     /coded_by="XM_016819969.2:98..412"
                     /db_xref="GeneID:107894725"
ORIGIN      
        1 mylfyvlkqf kllknksell lntnwqllir vslsvssiii qahgdkfaak rmrrltqrra
       61 vdytstvvry mqelqfhqtp llqflllpic ripwlqllvl lqth
//
LOCUS       XP_016675459              78 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675459
VERSION     XP_016675459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819970.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..78
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=8394
     CDS             1..78
                     /gene="LOC107894725"
                     /coded_by="XM_016819970.2:98..334"
                     /db_xref="GeneID:107894725"
ORIGIN      
        1 mylfyvlkqf kllknksell lntnwqllir vslsvssiii qgttvpsntt tailaapnls
       61 npmatvvgaa snpltynl
//
LOCUS       XP_040941992             966 aa            linear   PLN 06-AUG-2024
DEFINITION  SNF2 domain-containing protein CLASSY 3 [Gossypium hirsutum].
ACCESSION   XP_040941992
VERSION     XP_040941992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086058.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..966
                     /product="SNF2 domain-containing protein CLASSY 3"
                     /calculated_mol_wt=109678
     Region          <346..887
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          352..596
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(392..398,533)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..966
                     /gene="LOC121212718"
                     /coded_by="XM_041086058.1:155..3055"
                     /db_xref="GeneID:121212718"
ORIGIN      
        1 mlnpslpvas rtrsrmeayw sevcppskrr ntrkkvvvqd pspiptknhs retqflyeap
       61 nidihrceqd srhpanisnl dyneeedddd dedednddpm egshealpsp seednyesed
      121 vdycgeeeek dvvyindyts sgteskpksk gkkvgaasts srklhlltve adailenvds
      181 dsnkvleves ennslpikfg swventvtpn nadivddeme slltemqfcl asdgiaskps
      241 lveiedaanv sevkqdravl crqgdhylvl deeigikckf csflqleiky vaspfmkhpy
      301 gkfgrqysgi vdssmfdglq dvdpnidmpg cdssanvegt vweiipnike klyphqregf
      361 efiwnniagg iyrdksknss segggciish apgtgksllt ivflqtylke npscrpviva
      421 pcsmlltwea efskwkvdip fhnmnspdfc gmgktngval yeklkvgvpd adrlvrplvk
      481 llswkydggi lvisynlftq lagketkrkq kcknlhkqis killdlpgll ildeghiprn
      541 aatllwkals giktnrriil sgtpfqnnfd elfntlclvr ptfaegirys trykhnsrlg
      601 ckgneakrnf tswigsirne igglrevrav ikpfvhvykg tilqtalpgl rhtlvvlrpt
      661 elqkkilerv eeilkhvqei lecvkeaknl fkrrrekekk naldfdryvs misihpsllk
      721 qllkqlpdlk dinevvssiv steeierirl kpeegvktrf lmnllklsea leervivfsq
      781 ylgplrlime qleyhfkwke geeilfmhgk cdikqrqcsi nvfndpeska rvllasikac
      841 seginliggs rvvlldmtwn psverqaicr ayrlgqkkvv yvyrlissvi eghkfnrqag
      901 kdrvsellfs sdehqeqvcd ivedkvleem lqhgtiksmf ekiinepkdc efieafedqe
      961 kvsvps
//
LOCUS       XP_016675763             328 aa            linear   PLN 06-AUG-2024
DEFINITION  TVP38/TMEM64 family membrane protein slr0305 [Gossypium hirsutum].
ACCESSION   XP_016675763
VERSION     XP_016675763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820274.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..328
                     /product="TVP38/TMEM64 family membrane protein slr0305"
                     /calculated_mol_wt=35002
     Region          131..279
                     /region_name="TVP38"
                     /note="Uncharacterized membrane protein YdjX, related to
                     fungal oxalate transporter, TVP38/TMEM64 family [Function
                     unknown]; COG0398"
                     /db_xref="CDD:440167"
     CDS             1..328
                     /gene="LOC107895065"
                     /coded_by="XM_016820274.2:348..1334"
                     /db_xref="GeneID:107895065"
ORIGIN      
        1 mrtlltfrpp sisscyfppp pssssflysc frpnkrfhlf ktcssfrqsk kqqslqktps
       61 napqslrwfl npksdddekl kgdgdgdgnn gemegdtalk gtllagvllv gvvggfasvg
      121 yvykdqinaf lnqfstfieg ygpagyalfv avyaglevla ipaipltmsa gllfgsvigt
      181 ilvsisgtva asiafliary farerilklv egnkkflaid kaigengfrv vtllrlspll
      241 pfslgnylyg ltsvkfvpyv lgswlgmlpg twayvsagaf graiiqeesd fgigggngil
      301 tlglgllvta iaaayvtqla kdavkdie
//
LOCUS       XP_040941993             165 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein DAYSLEEPER-like isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040941993
VERSION     XP_040941993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086059.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="zinc finger BED domain-containing protein
                     DAYSLEEPER-like isoform X1"
                     /calculated_mol_wt=19422
     Region          24..106
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..165
                     /gene="LOC107949289"
                     /coded_by="XM_041086059.1:1394..1891"
                     /db_xref="GeneID:107949289"
ORIGIN      
        1 mkrrmqalyk krelengged ktfeldkyla eaneelvedf dillwwkvns lrfptlskmt
       61 rdvlaipvst vasesvfste grvfdqyrss ltpkivqalv csqdwirkss sqedikkive
      121 qiqeldkien eciraypkfm sfrelkglmq meifwreemd tngey
//
LOCUS       XP_016739498             149 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein DAYSLEEPER-like isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016739498
VERSION     XP_016739498.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884009.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016739498.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..149
                     /product="zinc finger BED domain-containing protein
                     DAYSLEEPER-like isoform X2"
                     /calculated_mol_wt=17422
     Region          24..106
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..149
                     /gene="LOC107949289"
                     /coded_by="XM_016884009.2:1380..1829"
                     /db_xref="GeneID:107949289"
ORIGIN      
        1 mkrrmqalyk krelengged ktfeldkyla eaneelvedf dillwwkvns lrfptlskmt
       61 rdvlaipvst vasesvfste grvfdqyrss ltpkivqalv csqdwirkss sqedikkive
      121 qiqeldkien glmqmeifwr eemdtngey
//
LOCUS       XP_016729528             484 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729528
VERSION     XP_016729528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874039.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..484
                     /product="uncharacterized protein"
                     /calculated_mol_wt=54151
     Region          46..102
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          334..425
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..484
                     /gene="LOC107940598"
                     /coded_by="XM_016874039.2:169..1623"
                     /db_xref="GeneID:107940598"
ORIGIN      
        1 mhqnqhtnrw rvgshaariv esmawlsaav dkacgpfspn kstlqilafe aaktmsrlva
       61 lykslsddel fklrkgpmks lgvaflnsmd esyllglvck ekledlghav vvvsrlskqc
      121 iddelnrfei ayhnkkqgii dvgnvdfnsr nvgkaiekme kyanatsalh gslvalnele
      181 vsekkmqkpn inidyfneei nfqrkqvlhf rqislwsqtf dtsvglmari vfviyarict
      241 ifgpfvpslt ciyipkrkal hmkvypetsy cllvdkekyt ehasksgpim kasrtkqrat
      301 rshsgqlcls gsimkasrte pknksliqsa pgntvgaagl alhyaniivm aescfhstts
      361 isnesrenmy emlpislkhd lrrklkghls kdvegsdggq glaqgckeal geiigwlapv
      421 ahetlrwqqe rdsqqqklds eptallmqtl hfsdlektea aivevlvgls ciyryegrre
      481 rhdg
//
LOCUS       XP_016675293             231 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675293
VERSION     XP_016675293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819804.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..231
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26359
     CDS             1..231
                     /gene="LOC107894542"
                     /coded_by="XM_016819804.2:268..963"
                     /db_xref="GeneID:107894542"
ORIGIN      
        1 msnrhllnsr isfnflvwwi lfgcfpglis sfevtldsie ifrthdwisk ptvyfeckge
       61 nttllpdvtk invvysfkgq eswqpltqld gkkckrcgfy ekdviktddv yaewlfcatd
      121 fqppagkyil fkenqlnvtf hcqecaslpg asnatpekrd ieddddddgk glrifiilvi
      181 tavvstvtvi glvmankhwq kkkrqqdqar flklfeegdd iedelglgtv i
//
LOCUS       XP_016675518             166 aa            linear   PLN 06-AUG-2024
DEFINITION  22.0 kDa class IV heat shock protein [Gossypium hirsutum].
ACCESSION   XP_016675518
VERSION     XP_016675518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..166
                     /product="22.0 kDa class IV heat shock protein"
                     /calculated_mol_wt=18768
     Region          59..150
                     /region_name="ACD_ScHsp26_like"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     cd06472"
                     /db_xref="CDD:107229"
     Site            order(59..65,72,74,76..77,99,104,107..115,117,122,
                     141..143)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107229"
     CDS             1..166
                     /gene="LOC107894831"
                     /coded_by="XM_016820029.2:257..757"
                     /db_xref="GeneID:107894831"
ORIGIN      
        1 mrllllllac yvglcngssl lpfmdpgsgs lllpdpsrvl eqipltlerd eslalsparv
       61 dwkataeghr imldvpglkk eelkieveen rvlrvsgerk reeekkgdhw hrversygkf
      121 wrqfrlpenv dldtvkakle ngvltlslak lspdkikgpr vvhiaw
//
LOCUS       XP_016675602             321 aa            linear   PLN 06-AUG-2024
DEFINITION  dof zinc finger protein DOF2.4 [Gossypium hirsutum].
ACCESSION   XP_016675602
VERSION     XP_016675602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="dof zinc finger protein DOF2.4"
                     /calculated_mol_wt=34243
     Region          66..122
                     /region_name="zf-Dof"
                     /note="Dof domain, zinc finger; pfam02701"
                     /db_xref="CDD:397014"
     CDS             1..321
                     /gene="LOC107894954"
                     /coded_by="XM_016820113.2:102..1067"
                     /db_xref="GeneID:107894954"
ORIGIN      
        1 mvftsipvyl dppnwqqhsn hqagpgnsvq hfppppllap hgagsirpgs madrarlani
       61 svpevalkcp rcestntkfc yfnnysltqp rhfcktckry wtlggalrnv pigggcrrnk
      121 rskgsvpksp vkgdrqtasg ssnttissns fgrsdilglg vgpqvptlrf taplhlhnec
      181 gggtdiglny gsvpasvgrt ndnlsyqkgs glsgagaagt sllsmtgldq wrlqqppqfa
      241 flgasyqves qgvepsacgv rpkisssmat liasvkmedn dqqevrfsrp fldvpgndqy
      301 wggtpwtdls cftssstknp l
//
LOCUS       XP_016667725             371 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein DDB_G0271670 [Gossypium hirsutum].
ACCESSION   XP_016667725
VERSION     XP_016667725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016812236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..371
                     /product="uncharacterized protein DDB_G0271670"
                     /calculated_mol_wt=40845
     CDS             1..371
                     /gene="LOC107888069"
                     /coded_by="XM_016812236.2:243..1358"
                     /db_xref="GeneID:107888069"
ORIGIN      
        1 mdigrgkgas kcsetgtees dgngiskhsl mhpelvgnqs ythssgtstg tsdhsqehie
       61 lgvaselfyf nqdvfngtes skvvsakqqr lsssssstss tddqfqankk lsdsrsgiaf
      121 tssskrddeh hvsatatsts rvpsflhgpt vtispplqmm dqeggydpyr isssvfkrrn
      181 sltpadwsia sneslfsiqv ennsfsrehf lnsksgefsk sdeelfalsp stdkksvefe
      241 ksegtlisdd gaqdktdpsa eepneekpty pprfwtspth sdvgtsvnsf afpvledgrn
      301 vvsmeekkeq qqqqqrqgre eeqeplssst psklsccgnc cscfpscqrq wqcctwhwhw
      361 crschnccqg k
//
LOCUS       XP_040941995              77 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich protein 23 [Gossypium hirsutum].
ACCESSION   XP_040941995
VERSION     XP_040941995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086061.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..77
                     /product="glycine-rich protein 23"
                     /calculated_mol_wt=6516
     CDS             1..77
                     /gene="LOC121212721"
                     /coded_by="XM_041086061.1:29..262"
                     /db_xref="GeneID:121212721"
ORIGIN      
        1 mgggkggsgg gskgggggng ggsgnvgggs tskggggasg tmvapgsgga atisrgafes
       61 npqgyfaglh ssekgnk
//
LOCUS       XP_016675797             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675797
VERSION     XP_016675797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16834
     Region          <39..67
                     /region_name="DUF1068"
                     /note="Protein of unknown function (DUF1068); pfam06364"
                     /db_xref="CDD:399393"
     CDS             1..152
                     /gene="LOC107895092"
                     /coded_by="XM_016820308.2:1474..1932"
                     /db_xref="GeneID:107895092"
ORIGIN      
        1 mvlslinagl snasftevsi tiskgsgqmq fgygdvrrre kaeealsaqm kltamweira
       61 rqkgwrdkva ksnaqtqgkt nytrlqsknn lqkahngwll plqmhmggia tankndidqh
      121 avdtvcalns nsgvsfryfm ckkvleclmf vc
//
LOCUS       XP_016675798             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675798
VERSION     XP_016675798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16834
     Region          <39..67
                     /region_name="DUF1068"
                     /note="Protein of unknown function (DUF1068); pfam06364"
                     /db_xref="CDD:399393"
     CDS             1..152
                     /gene="LOC107895092"
                     /coded_by="XM_016820309.2:1054..1512"
                     /db_xref="GeneID:107895092"
ORIGIN      
        1 mvlslinagl snasftevsi tiskgsgqmq fgygdvrrre kaeealsaqm kltamweira
       61 rqkgwrdkva ksnaqtqgkt nytrlqsknn lqkahngwll plqmhmggia tankndidqh
      121 avdtvcalns nsgvsfryfm ckkvleclmf vc
//
LOCUS       XP_040941996             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941996
VERSION     XP_040941996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086062.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16834
     Region          <39..67
                     /region_name="DUF1068"
                     /note="Protein of unknown function (DUF1068); pfam06364"
                     /db_xref="CDD:399393"
     CDS             1..152
                     /gene="LOC107895092"
                     /coded_by="XM_041086062.1:959..1417"
                     /db_xref="GeneID:107895092"
ORIGIN      
        1 mvlslinagl snasftevsi tiskgsgqmq fgygdvrrre kaeealsaqm kltamweira
       61 rqkgwrdkva ksnaqtqgkt nytrlqsknn lqkahngwll plqmhmggia tankndidqh
      121 avdtvcalns nsgvsfryfm ckkvleclmf vc
//
LOCUS       XP_016675803             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675803
VERSION     XP_016675803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=14027
     Region          <11..39
                     /region_name="DUF1068"
                     /note="Protein of unknown function (DUF1068); pfam06364"
                     /db_xref="CDD:399393"
     CDS             1..124
                     /gene="LOC107895092"
                     /coded_by="XM_016820314.2:114..488"
                     /db_xref="GeneID:107895092"
ORIGIN      
        1 mqfgygdvrr rekaeealsa qmkltamwei rarqkgwrdk vaksnaqtqg ktnytrlqsk
       61 nnlqkahngw llplqmhmgg iatankndid qhavdtvcal nsnsgvsfry fmckkvlecl
      121 mfvc
//
LOCUS       XP_040941997             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040941997
VERSION     XP_040941997.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086063.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=14027
     Region          <11..39
                     /region_name="DUF1068"
                     /note="Protein of unknown function (DUF1068); pfam06364"
                     /db_xref="CDD:399393"
     CDS             1..124
                     /gene="LOC107895092"
                     /coded_by="XM_041086063.1:55..429"
                     /db_xref="GeneID:107895092"
ORIGIN      
        1 mqfgygdvrr rekaeealsa qmkltamwei rarqkgwrdk vaksnaqtqg ktnytrlqsk
       61 nnlqkahngw llplqmhmgg iatankndid qhavdtvcal nsnsgvsfry fmckkvlecl
      121 mfvc
//
LOCUS       XP_016675801             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675801
VERSION     XP_016675801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=14027
     Region          <11..39
                     /region_name="DUF1068"
                     /note="Protein of unknown function (DUF1068); pfam06364"
                     /db_xref="CDD:399393"
     CDS             1..124
                     /gene="LOC107895092"
                     /coded_by="XM_016820312.2:81..455"
                     /db_xref="GeneID:107895092"
ORIGIN      
        1 mqfgygdvrr rekaeealsa qmkltamwei rarqkgwrdk vaksnaqtqg ktnytrlqsk
       61 nnlqkahngw llplqmhmgg iatankndid qhavdtvcal nsnsgvsfry fmckkvlecl
      121 mfvc
//
LOCUS       XP_016675794             518 aa            linear   PLN 06-AUG-2024
DEFINITION  suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016675794
VERSION     XP_016675794.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820305.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..518
                     /product="suppressor of mec-8 and unc-52 protein homolog 1
                     isoform X1"
                     /calculated_mol_wt=58289
     Region          7..36
                     /region_name="LisH_TPL"
                     /note="LisH-like dimerization domain; pfam17814"
                     /db_xref="CDD:375350"
     Region          40..91
                     /region_name="CTLH"
                     /note="C-terminal to LisH motif; smart00668"
                     /db_xref="CDD:128914"
     Region          <218..516
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          218..261
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          266..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          351..401
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..482
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          492..516
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..518
                     /gene="LOC107895089"
                     /coded_by="XM_016820305.2:115..1671"
                     /db_xref="GeneID:107895089"
ORIGIN      
        1 mtleieardv ikivlqfcke nslhqtfqtl qnecqvslnt vdsietfvad insgrwdail
       61 pqvaqlklpr nkledlyeqi vlemielrel dtarailrqt qamgvmkqeq perylrlehl
      121 lvrtyfdpne ayqdstkekr raqiaqaiaa evsvvppsrl maligqalkw qqhqgllppg
      181 tqfdlfrgta amkqdiddmh pttlshtikf gkkchaecar fspdgqflvs ssvdgfievw
      241 dyisgklkkd lqyqadetfm mhddpvlcvd fsrdsemias gsqdgkikvw rirtgqclrr
      301 lerahsqgvt slvfsrdgsq llstsfdsta rihglksgkl lkefrghtsy vndaiftadg
      361 srvitassdc tvkvwdvktt dclqtfkppp tlrggdasvn svhlfpkntd hiivcnktss
      421 iyimtlqgqv vksfssgkke ggdfvaacvs pkgewiycvg edrniycfsy qtgklehlmt
      481 vsspievhek dvigithhph rnlvatyaed ctmklwks
//
LOCUS       XP_016675795             512 aa            linear   PLN 06-AUG-2024
DEFINITION  suppressor of mec-8 and unc-52 protein homolog 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016675795
VERSION     XP_016675795.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820306.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..512
                     /product="suppressor of mec-8 and unc-52 protein homolog 1
                     isoform X2"
                     /calculated_mol_wt=57676
     Region          7..36
                     /region_name="LisH_TPL"
                     /note="LisH-like dimerization domain; pfam17814"
                     /db_xref="CDD:375350"
     Region          40..91
                     /region_name="CTLH"
                     /note="C-terminal to LisH motif; smart00668"
                     /db_xref="CDD:128914"
     Region          <218..510
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          218..261
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          266..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          351..401
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..481
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..512
                     /gene="LOC107895089"
                     /coded_by="XM_016820306.2:115..1653"
                     /db_xref="GeneID:107895089"
ORIGIN      
        1 mtleieardv ikivlqfcke nslhqtfqtl qnecqvslnt vdsietfvad insgrwdail
       61 pqvaqlklpr nkledlyeqi vlemielrel dtarailrqt qamgvmkqeq perylrlehl
      121 lvrtyfdpne ayqdstkekr raqiaqaiaa evsvvppsrl maligqalkw qqhqgllppg
      181 tqfdlfrgta amkqdiddmh pttlshtikf gkkchaecar fspdgqflvs ssvdgfievw
      241 dyisgklkkd lqyqadetfm mhddpvlcvd fsrdsemias gsqdgkikvw rirtgqclrr
      301 lerahsqgvt slvfsrdgsq llstsfdsta rihglksgkl lkefrghtsy vndaiftadg
      361 srvitassdc tvkvwdvktt dclqtfkppp tlrggdasvn svhlfpkntd hiivcnktss
      421 iyimtlqgqv vksfssgkke ggdfvaacvs pkgewiycvg edrniycfsy qtgklehlmt
      481 vhekdvigit hhphrnlvat yaedctmklw ks
//
LOCUS       XP_016675796             239 aa            linear   PLN 06-AUG-2024
DEFINITION  ribosomal RNA-processing protein 7 homolog A [Gossypium hirsutum].
ACCESSION   XP_016675796
VERSION     XP_016675796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820307.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..239
                     /product="ribosomal RNA-processing protein 7 homolog A"
                     /calculated_mol_wt=27516
     Region          107..239
                     /region_name="RRP7_Rrp7A"
                     /note="RRP7 domain ribosomal RNA-processing protein 7
                     homolog A (Rrp7A) and similar proteins; cd12951"
                     /db_xref="CDD:240578"
     CDS             1..239
                     /gene="LOC107895090"
                     /coded_by="XM_016820307.2:141..860"
                     /db_xref="GeneID:107895090"
ORIGIN      
        1 mkkktskdka navcvaeaaq mtenlvatkq gkkkdklskk krkskekinp svgivdkpvd
       61 gnevhlqekf rkdrkkkskg qlletskgan qdevyeipsg dddcskgmkk wltdyhrsrp
      121 glkvlqqrid efiieheakl eqerkekear lteggwilve hhkgrkkttd tesgttvgsv
      181 sqaaveekla kkkskevfdf yrfqkreaqr selmilqskf eqdkkriqql raarkfrpy
//
LOCUS       XP_016675790             278 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675790
VERSION     XP_016675790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820301.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..278
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=30991
     Region          <65..114
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     CDS             1..278
                     /gene="LOC107895087"
                     /coded_by="XM_016820301.2:160..996"
                     /db_xref="GeneID:107895087"
ORIGIN      
        1 mevklthkkh ispsksrlsn ltkttfppht lrlkpwaaae iqhfqglvkk wrlqnktkdy
       61 scarvvkdfh crgetlssis kvyelsvhsi aaanknivdi nlvfqgqlln ipssslldtq
      121 ldrakksrlw qsiralkaps gqkfftmits hclsnqakst gyflvlvpli afcigciist
      181 lhtrvsrsik hqaadksqah hpgakgrrwk salsdlvegd vfdselglds nstsedeani
      241 qneeasedyg rlehdyqkfl secgiskwgy wrggspga
//
LOCUS       XP_016675791             277 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675791
VERSION     XP_016675791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820302.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..277
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=30863
     Region          <65..114
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     CDS             1..277
                     /gene="LOC107895087"
                     /coded_by="XM_016820302.2:160..993"
                     /db_xref="GeneID:107895087"
ORIGIN      
        1 mevklthkkh ispsksrlsn ltkttfppht lrlkpwaaae iqhfqglvkk wrlqnktkdy
       61 scarvvkdfh crgetlssis kvyelsvhsi aaanknivdi nlvfqgqlln ipssslldtq
      121 ldrakksrlw qsiralkaps gqkfftmits hclsnakstg yflvlvplia fcigciistl
      181 htrvsrsikh qaadksqahh pgakgrrwks alsdlvegdv fdselgldsn stsedeaniq
      241 neeasedygr lehdyqkfls ecgiskwgyw rggspga
//
LOCUS       XP_016675792             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675792
VERSION     XP_016675792.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820303.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..274
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=30462
     Region          65..107
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     CDS             1..274
                     /gene="LOC107895087"
                     /coded_by="XM_016820303.2:158..982"
                     /db_xref="GeneID:107895087"
ORIGIN      
        1 mevklthkkh ispsksrlsn ltkttfppht lrlkpwaaae iqhfqglvkk wrlqnktkdy
       61 scarvvkege tlssiskvye lsvhsiaaan knivdinlvf qgqllnipss slldtqldra
      121 kksrlwqsir alkapsgqkf ftmitshcls nqakstgyfl vlvpliafci gciistlhtr
      181 vsrsikhqaa dksqahhpga kgrrwksals dlvegdvfds elgldsnsts edeaniqnee
      241 asedygrleh dyqkflsecg iskwgywrgg spga
//
LOCUS       XP_040942000             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942000
VERSION     XP_040942000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086066.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..273
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=30334
     Region          65..107
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     CDS             1..273
                     /gene="LOC107895087"
                     /coded_by="XM_041086066.1:158..979"
                     /db_xref="GeneID:107895087"
ORIGIN      
        1 mevklthkkh ispsksrlsn ltkttfppht lrlkpwaaae iqhfqglvkk wrlqnktkdy
       61 scarvvkege tlssiskvye lsvhsiaaan knivdinlvf qgqllnipss slldtqldra
      121 kksrlwqsir alkapsgqkf ftmitshcls nakstgyflv lvpliafcig ciistlhtrv
      181 srsikhqaad ksqahhpgak grrwksalsd lvegdvfdse lgldsnstse deaniqneea
      241 sedygrlehd yqkflsecgi skwgywrggs pga
//
LOCUS       XP_016675788             296 aa            linear   PLN 06-AUG-2024
DEFINITION  glucuronoxylan 4-O-methyltransferase 3 [Gossypium hirsutum].
ACCESSION   XP_016675788
VERSION     XP_016675788.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820299.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..296
                     /product="glucuronoxylan 4-O-methyltransferase 3"
                     /calculated_mol_wt=33020
     Region          73..295
                     /region_name="Polysacc_synt_4"
                     /note="Polysaccharide biosynthesis; cl04661"
                     /db_xref="CDD:383809"
     CDS             1..296
                     /gene="LOC107895085"
                     /coded_by="XM_016820299.2:207..1097"
                     /db_xref="GeneID:107895085"
ORIGIN      
        1 mrsyskphsp fntklilica svvlfvflli tttssfsksp isqshlsnst hpvddsepsp
       61 ldcpslpltp tctktppsla nalihyattn itpqqtlkei svsarvlekk apcnflvfgl
      121 ghdslmwagl nhggrtvfle edkawieqik qklpslesyh veyvtkvhqa ddllktgmke
      181 eckvvgdprf skcdlalkgf pneiydiewd limvdaptgf hdeapgrmna iytaglmarn
      241 reegetdvfv hdvnrvvedk fsmaflcegy lreqqgllrh ftipshrars grpfcp
//
LOCUS       XP_016675787             360 aa            linear   PLN 06-AUG-2024
DEFINITION  acetylglutamate kinase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016675787
VERSION     XP_016675787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..360
                     /product="acetylglutamate kinase, chloroplastic"
                     /calculated_mol_wt=38017
     Region          47..360
                     /region_name="PLN02512"
                     /note="acetylglutamate kinase"
                     /db_xref="CDD:178128"
     Site            85..94
                     /site_type="active"
                     /note="feedback inhibition sensing region [active]"
                     /db_xref="CDD:239783"
     Site            order(86..88,90,93..94,121,125,129,149..150,169,172..173,
                     178,181,185,192,194..196,198,200..203,229,238,342,
                     345..346,350)
                     /site_type="other"
                     /note="homohexameric interface [polypeptide binding]"
                     /db_xref="CDD:239783"
     Site            order(104,107..108,257,278..280,284,310,312,314..315,318)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:239783"
     Site            order(138..139,160..161,255,257..258)
                     /site_type="other"
                     /note="N-acetyl-L-glutamate binding site [chemical
                     binding]"
                     /db_xref="CDD:239783"
     CDS             1..360
                     /gene="LOC107895083"
                     /coded_by="XM_016820298.2:274..1356"
                     /db_xref="GeneID:107895083"
ORIGIN      
        1 mgatatgksl hfcssqdpls flsltmtksk aetlnlnfrf skppltpnsr rlrlsirass
       61 psstalndpp lpsltnsdlq lrvrilsesl pyiqkfrgkt ivvkyggaam ksaelkasvv
      121 rdlvllscvg lrpvlvhggg peinvllnql nipaqfrdgl rvtdartmev vsmvlvgkvn
      181 kdlvsrinya gatavglsgm dgrllvarps pnaaqlgfvg evarvdptvl qtivdngsip
      241 viasvaadey gqpyninadt vagevaaalg aeklilltdv agilrnredp gslvkeidik
      301 gvkkmieegk vgggmipkvn ccirsldqgv ttasiidgrv ehsllheimt degagtmitg
//
LOCUS       XP_016675786             487 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-amyrin 28-monooxygenase [Gossypium hirsutum].
ACCESSION   XP_016675786
VERSION     XP_016675786.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820297.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675786.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..487
                     /product="beta-amyrin 28-monooxygenase"
                     /calculated_mol_wt=54883
     Region          79..484
                     /region_name="CYP90-like"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; cd11043"
                     /db_xref="CDD:410669"
     Site            order(143,147,154,198,293..294,297..298,301..302,305,359,
                     368,370,393,426..428,432..436,439..440)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410669"
     Site            order(221..222,293,296..297,301,366..369)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410669"
     CDS             1..487
                     /gene="LOC107895081"
                     /coded_by="XM_016820297.2:33..1496"
                     /db_xref="GeneID:107895081"
ORIGIN      
        1 mklaaaidaf dslmpyvlhl vllyvsaglf yflykykssg ggpnpnlppg kkglpyiget
       61 ldfvlasrrg tpekfvtdrt tkyspdvfrt sllgedmavf cgsagnkflf sgqnkyvtsw
      121 wpdsikkalm dpssvdnssk eestklrayl ppflkpeslq hfipvmdima kehlnqhwsp
      181 ynevqvfpls kkytfalacr lfmsvtdnde ienfakpfal ataglmsvpi dlpgttfnra
      241 vkagrlirqr llalitqkkn eilekgktva sdlvdsmlmd gmteveignk ivgffiashd
      301 ttstaitfiv sylsdypevy nrvleeqmev lrckeagepl rwedirkmky twcvasevmr
      361 lappangsfr eaitdftyag ytipkgwkaf wmvhtthknp kyfpdperfd psrfegngpa
      421 pysfvpfggg prmcpgkeya rleiltfihn llttfkwvkl npnekisyip spipkeglpi
      481 kiqplln
//
LOCUS       XP_016675781             728 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA mismatch repair protein MLH1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675781
VERSION     XP_016675781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..728
                     /product="DNA mismatch repair protein MLH1 isoform X1"
                     /calculated_mol_wt=81733
     Region          13..>347
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     Region          439..728
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..728
                     /gene="LOC107895080"
                     /coded_by="XM_016820292.2:76..2262"
                     /db_xref="GeneID:107895080"
ORIGIN      
        1 meiepaeevk epprihrlde svvnriaage viqlpvsavk elvensldas stsisvlvkd
       61 gglkliqvsd dghgiryedl pilcerhtts klskyedlqs iksmgfrgea lasmtyvghv
      121 tvttitrgql hgyrvsyrdg vmenepkaca avkgtqivie nlfynmvarr ktlqnsaddy
      181 tkivdllsrf aihhidvsfs crkhgaarad vhsvatpsrl nairsvygls vaqnlikiea
      241 sdndpsssvf emdgfisnsn yvakkttmvl findrlvect alkralevvy vatlpkaskp
      301 fiymsitlpp ehvdvnvhpt krevsllnqe vivekiqsvv esvlrnsnes rtfqeqtvea
      361 tpsvpsvtnn dlhlspspsg sksqrvpvnk ivrtdssdpa grmhaylykn pqkylgrdss
      421 lttvrssvrq rrnlketadl tsiqelindi drkcnsglld ivrqstyigm addvfallqh
      481 nthlylanvv nlskelmyqq vlrrfahfna iqlsepaplq elimlalkee dsdlesnend
      541 dlkkkiaemn tqllnqksem leeyfcifid sdgnlsrlpi lldqyipdmd rvpefvlclg
      601 ndveweeekn cfqslaaalg nfyamhppml pnpsgkglef yrkrkhgkht qdggnschva
      661 dgtaeedefe hellseaeta waqrewsiqh vlfpsmrlfl kppnsmasng tfvrvaslek
      721 lykiferc
//
LOCUS       XP_016675782             727 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA mismatch repair protein MLH1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675782
VERSION     XP_016675782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..727
                     /product="DNA mismatch repair protein MLH1 isoform X2"
                     /calculated_mol_wt=81662
     Region          13..>347
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     Region          439..727
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..727
                     /gene="LOC107895080"
                     /coded_by="XM_016820293.2:76..2259"
                     /db_xref="GeneID:107895080"
ORIGIN      
        1 meiepaeevk epprihrlde svvnriaage viqlpvsavk elvensldas stsisvlvkd
       61 gglkliqvsd dghgiryedl pilcerhtts klskyedlqs iksmgfrgea lasmtyvghv
      121 tvttitrgql hgyrvsyrdg vmenepkaca avkgtqivie nlfynmvarr ktlqnsaddy
      181 tkivdllsrf aihhidvsfs crkhgaarad vhsvatpsrl nairsvygls vaqnlikiea
      241 sdndpsssvf emdgfisnsn yvakkttmvl findrlvect alkralevvy vatlpkaskp
      301 fiymsitlpp ehvdvnvhpt krevsllnqe vivekiqsvv esvlrnsnes rtfqeqtvea
      361 tpsvpsvtnn dlhlspspsg sksqrvpvnk ivrtdssdpa grmhaylykn pqkylgrdss
      421 lttvrssvrq rrnlketadl tsiqelindi drkcnsglld ivrqstyigm addvfallqh
      481 nthlylanvv nlskelmyqq vlrrfahfna iqlsepaplq elimlalkee dsdlesnend
      541 dlkkkiaemn tqllnqksem leeyfcifid sdgnlsrlpi lldqyipdmd rvpefvlclg
      601 ndveweeekn cfqslaaalg nfyamhppml pnpsgkglef yrkrkhgkht qdggnschvd
      661 gtaeedefeh ellseaetaw aqrewsiqhv lfpsmrlflk ppnsmasngt fvrvaslekl
      721 ykiferc
//
LOCUS       XP_016675783             725 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA mismatch repair protein MLH1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016675783
VERSION     XP_016675783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..725
                     /product="DNA mismatch repair protein MLH1 isoform X3"
                     /calculated_mol_wt=81475
     Region          13..>347
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     Region          439..725
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..725
                     /gene="LOC107895080"
                     /coded_by="XM_016820294.2:76..2253"
                     /db_xref="GeneID:107895080"
ORIGIN      
        1 meiepaeevk epprihrlde svvnriaage viqlpvsavk elvensldas stsisvlvkd
       61 gglkliqvsd dghgiryedl pilcerhtts klskyedlqs iksmgfrgea lasmtyvghv
      121 tvttitrgql hgyrvsyrdg vmenepkaca avkgtqivie nlfynmvarr ktlqnsaddy
      181 tkivdllsrf aihhidvsfs crkhgaarad vhsvatpsrl nairsvygls vaqnlikiea
      241 sdndpsssvf emdgfisnsn yvakkttmvl findrlvect alkralevvy vatlpkaskp
      301 fiymsitlpp ehvdvnvhpt krevsllnqe vivekiqsvv esvlrnsnes rtfqeqtvea
      361 tpsvpsvtnn dlhlspspsg sksqrvpvnk ivrtdssdpa grmhaylykn pqkylgrdss
      421 lttvrssvrq rrnlketadl tsiqelindi drkclldivr qstyigmadd vfallqhnth
      481 lylanvvnls kelmyqqvlr rfahfnaiql sepaplqeli mlalkeedsd lesnenddlk
      541 kkiaemntql lnqksemlee yfcifidsdg nlsrlpilld qyipdmdrvp efvlclgndv
      601 eweeekncfq slaaalgnfy amhppmlpnp sgkglefyrk rkhgkhtqdg gnschvadgt
      661 aeedefehel lseaetawaq rewsiqhvlf psmrlflkpp nsmasngtfv rvasleklyk
      721 iferc
//
LOCUS       XP_040942001             724 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA mismatch repair protein MLH1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942001
VERSION     XP_040942001.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086067.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..724
                     /product="DNA mismatch repair protein MLH1 isoform X4"
                     /calculated_mol_wt=81404
     Region          13..>347
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     Region          439..724
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..724
                     /gene="LOC107895080"
                     /coded_by="XM_041086067.1:76..2250"
                     /db_xref="GeneID:107895080"
ORIGIN      
        1 meiepaeevk epprihrlde svvnriaage viqlpvsavk elvensldas stsisvlvkd
       61 gglkliqvsd dghgiryedl pilcerhtts klskyedlqs iksmgfrgea lasmtyvghv
      121 tvttitrgql hgyrvsyrdg vmenepkaca avkgtqivie nlfynmvarr ktlqnsaddy
      181 tkivdllsrf aihhidvsfs crkhgaarad vhsvatpsrl nairsvygls vaqnlikiea
      241 sdndpsssvf emdgfisnsn yvakkttmvl findrlvect alkralevvy vatlpkaskp
      301 fiymsitlpp ehvdvnvhpt krevsllnqe vivekiqsvv esvlrnsnes rtfqeqtvea
      361 tpsvpsvtnn dlhlspspsg sksqrvpvnk ivrtdssdpa grmhaylykn pqkylgrdss
      421 lttvrssvrq rrnlketadl tsiqelindi drkclldivr qstyigmadd vfallqhnth
      481 lylanvvnls kelmyqqvlr rfahfnaiql sepaplqeli mlalkeedsd lesnenddlk
      541 kkiaemntql lnqksemlee yfcifidsdg nlsrlpilld qyipdmdrvp efvlclgndv
      601 eweeekncfq slaaalgnfy amhppmlpnp sgkglefyrk rkhgkhtqdg gnschvdgta
      661 eedefehell seaetawaqr ewsiqhvlfp smrlflkppn smasngtfvr vasleklyki
      721 ferc
//
LOCUS       XP_040942002             611 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA mismatch repair protein MLH1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942002
VERSION     XP_040942002.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086068.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..611
                     /product="DNA mismatch repair protein MLH1 isoform X5"
                     /calculated_mol_wt=68414
     Region          13..>347
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     Region          439..>603
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..611
                     /gene="LOC107895080"
                     /coded_by="XM_041086068.1:76..1911"
                     /db_xref="GeneID:107895080"
ORIGIN      
        1 meiepaeevk epprihrlde svvnriaage viqlpvsavk elvensldas stsisvlvkd
       61 gglkliqvsd dghgiryedl pilcerhtts klskyedlqs iksmgfrgea lasmtyvghv
      121 tvttitrgql hgyrvsyrdg vmenepkaca avkgtqivie nlfynmvarr ktlqnsaddy
      181 tkivdllsrf aihhidvsfs crkhgaarad vhsvatpsrl nairsvygls vaqnlikiea
      241 sdndpsssvf emdgfisnsn yvakkttmvl findrlvect alkralevvy vatlpkaskp
      301 fiymsitlpp ehvdvnvhpt krevsllnqe vivekiqsvv esvlrnsnes rtfqeqtvea
      361 tpsvpsvtnn dlhlspspsg sksqrvpvnk ivrtdssdpa grmhaylykn pqkylgrdss
      421 lttvrssvrq rrnlketadl tsiqelindi drkcnsglld ivrqstyigm addvfallqh
      481 nthlylanvv nlskelmyqq vlrrfahfna iqlsepaplq elimlalkee dsdlesnend
      541 dlkkkiaemn tqllnqksem leeyfcifid sdgnlsrlpi lldqyipdmd rvpefvlclg
      601 ndvlqmewhg p
//
LOCUS       XP_016675776             310 aa            linear   PLN 06-AUG-2024
DEFINITION  carboxymethylenebutenolidase homolog isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675776
VERSION     XP_016675776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820287.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..310
                     /product="carboxymethylenebutenolidase homolog isoform X1"
                     /calculated_mol_wt=33439
     Region          81..302
                     /region_name="DLH"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG0412"
                     /db_xref="CDD:440181"
     CDS             1..310
                     /gene="LOC107895076"
                     /coded_by="XM_016820287.2:212..1144"
                     /db_xref="GeneID:107895076"
ORIGIN      
        1 mglasattis sssssllsss lcparrgfll pchhhfcfls tfskcnlnwk rssgkkrger
       61 vkcsavgvgv edeacelvng velsigegdd niqaylfkav knnngagvll lsdifgfqds
      121 atrdfayqva chgynvlvpd lfrgdpwekg qpkpmfeqwl asqdlqrvan diatstkwmv
      181 defraagisk klgiigfcfg ggrvidvlaa dqgacfstav sfygtrmdpt paskikvpvl
      241 fisgdddplc pigvlskfek iigngsrvvi fkgrghafah rpgsteedad aeqaftlmrn
      301 wlhdgllvns
//
LOCUS       XP_016675777             293 aa            linear   PLN 06-AUG-2024
DEFINITION  carboxymethylenebutenolidase homolog isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016675777
VERSION     XP_016675777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820288.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..293
                     /product="carboxymethylenebutenolidase homolog isoform X2"
                     /calculated_mol_wt=31833
     Region          64..285
                     /region_name="DLH"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG0412"
                     /db_xref="CDD:440181"
     CDS             1..293
                     /gene="LOC107895076"
                     /coded_by="XM_016820288.2:201..1082"
                     /db_xref="GeneID:107895076"
ORIGIN      
        1 mpcqkrlssa lpsslllpln ffyvqskcnl nwkrssgkkr gervkcsavg vgvedeacel
       61 vngvelsige gddniqaylf kavknnngag vlllsdifgf qdsatrdfay qvachgynvl
      121 vpdlfrgdpw ekgqpkpmfe qwlasqdlqr vandiatstk wmvdefraag iskklgiigf
      181 cfgggrvidv laadqgacfs tavsfygtrm dptpaskikv pvlfisgddd plcpigvlsk
      241 fekiigngsr vvifkgrgha fahrpgstee dadaeqaftl mrnwlhdgll vns
//
LOCUS       XP_016675780              96 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675780
VERSION     XP_016675780.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820291.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=10166
     Region          5..73
                     /region_name="DUF543"
                     /note="Domain of unknown function (DUF543); pfam04418"
                     /db_xref="CDD:461300"
     CDS             1..96
                     /gene="LOC107895079"
                     /coded_by="XM_016820291.2:208..498"
                     /db_xref="GeneID:107895079"
ORIGIN      
        1 mgdnkeltps kydmnakwda cidltlrrfv yaslagafgg llffrspvtr wasvafgagi
       61 gigsaytdcs slfggyspkl appklddapa pkeqve
//
LOCUS       XP_040942003              93 aa            linear   PLN 06-AUG-2024
DEFINITION  MICOS complex subunit Mic10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942003
VERSION     XP_040942003.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086069.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..93
                     /product="MICOS complex subunit Mic10 isoform X2"
                     /calculated_mol_wt=9857
     Region          5..70
                     /region_name="DUF543"
                     /note="Domain of unknown function (DUF543); pfam04418"
                     /db_xref="CDD:461300"
     CDS             1..93
                     /gene="LOC107895079"
                     /coded_by="XM_041086069.1:190..471"
                     /db_xref="GeneID:107895079"
ORIGIN      
        1 mgdnkeltps kydmnakwda cidltlrrfv yaslagafgg llffmtrwas vafgagigig
       61 saytdcsslf ggyspklapp klddapapke qve
//
LOCUS       XP_016675778              96 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675778
VERSION     XP_016675778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820289.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10212
     Region          5..73
                     /region_name="DUF543"
                     /note="Domain of unknown function (DUF543); pfam04418"
                     /db_xref="CDD:461300"
     CDS             1..96
                     /gene="LOC107895077"
                     /coded_by="XM_016820289.2:244..534"
                     /db_xref="GeneID:107895077"
ORIGIN      
        1 mgdnkeltps kydmnakwda cidltlrrfv ysslagafgg llffrspvtr wasvafgagi
       61 aigsaytdcs clfggyspkl appklddapa pkeqve
//
LOCUS       XP_040942004             591 aa            linear   PLN 06-AUG-2024
DEFINITION  patellin-3 [Gossypium hirsutum].
ACCESSION   XP_040942004
VERSION     XP_040942004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086070.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..591
                     /product="patellin-3"
                     /calculated_mol_wt=65660
     Region          <31..177
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          <119..254
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          <258..290
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          304..474
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..591
                     /gene="LOC121212725"
                     /coded_by="XM_041086070.1:244..2019"
                     /db_xref="GeneID:121212725"
ORIGIN      
        1 maeetqkpea aaapapteev vvekeseqed apekpadavv edkpaeavee epkveakdtk
       61 vteaasfkee tniagelpdp qkkaldelkq liqealnkhe ftpppakdkd kpapeekkee
      121 dqpatsaaet evkveteapa pvevkeeeka dppveapapv evreeekadp pieapapetv
      181 vetevvekvs aadddgaktv eaieesvvav atpppaekpe eeassslkpe vvaqseekpe
      241 eaevprpppq evsiwgipll adersdvill kflrardfkv kdaftmiknt viwrkefgvd
      301 glldeelgne lekvvfmhgf dkeghpvcyn vygefqnkel yqntfadeek rskflrwriq
      361 fleksirkld fspngistiv qvndlknspg pgkrelrqat nqalhllqdn ypefvakqvf
      421 invpwwylaf nmmispfltq rtkskfvcas pakssdilfr yiapeqvpvq ygglsrdgeq
      481 eftvadaate vtikpatkhs vefpvtekst vvwevrvvgw dvnygaefvp taedgytviv
      541 sktrkvgpad etvisnsfkt gepgkivlti dnqttkkkkl vyrskakpys e
//
LOCUS       XP_040942005             174 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L9-like [Gossypium hirsutum].
ACCESSION   XP_040942005
VERSION     XP_040942005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086071.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..174
                     /product="50S ribosomal protein L9-like"
                     /calculated_mol_wt=20055
     Region          18..168
                     /region_name="RplI"
                     /note="Ribosomal protein L9 [Translation, ribosomal
                     structure and biogenesis]; COG0359"
                     /db_xref="CDD:440128"
     CDS             1..174
                     /gene="LOC107934768"
                     /coded_by="XM_041086071.1:392..916"
                     /db_xref="GeneID:107934768"
ORIGIN      
        1 mqplfyacqg iryrkldvil ttsieklgkv getvkvapgy frnhlmpkll avpnidkfay
       61 likeqrkiyq pkeeevqvvt knmedkskvy ekaayrllng rlvlrrsinv ekfraqstkd
      121 dpielrspmt kdeivaevgr qlcvqidpen lhlptpletf glfdvqlrmp kcmc
//
LOCUS       XP_016675767             562 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 5.10 [Gossypium hirsutum].
ACCESSION   XP_016675767
VERSION     XP_016675767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820278.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..562
                     /product="protein NRT1/ PTR FAMILY 5.10"
                     /calculated_mol_wt=61331
     Region          35..556
                     /region_name="MFS_NPF5"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; cd17417"
                     /db_xref="CDD:340975"
     Site            order(48..49,52..53,56,89,166..167,169..171,174,200,
                     203..204,207,331,334..335,338..340,343,375,379,461..462,
                     466,470,486,489..490,493..494,497)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340975"
     CDS             1..562
                     /gene="LOC107895068"
                     /coded_by="XM_016820278.2:452..2140"
                     /db_xref="GeneID:107895068"
ORIGIN      
        1 msdlaaaetp llddsvkgcl dfkgrpvhrs nsggwtsasf iiavevaerf ayygissnli
       61 tyltgplgls taaaaaqvns wsgvatllpl lgafladsfl gryrtiilas lvcilglgll
      121 tlsatlpsvt tsgapnadnv tlntssmlqy qvilfffsly lvafgqgghk pcvqafgadq
      181 fdaehpveck akssffnwwy fsiaagillt llilnyiqen lswvlgfaip aivmavgllv
      241 fllgtmtyrf svegdkespf vrigrvfila irnrkiassa iateesfkqf kfldkallas
      301 dstmeqgkvc smreveeaka vlrlapiwat cliyavvfaq tsilftkqga tmdrsitrgi
      361 eipaatlqcf isfsillfip iydrivvpla raftgkpggi tmlqrigtgi avsaiamvia
      421 alvemkrlqt arehglvdkp nvtvpmwvww lvpqyslcgl sdvlaivglq efyydqmpne
      481 lrsigiafyl silgfgsfls sflisvietv tgkdgrdswf adnlnrahld yfywllaals
      541 alglalyvys arsyiyarrs ts
//
LOCUS       XP_016675768             259 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH81 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675768
VERSION     XP_016675768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..259
                     /product="transcription factor bHLH81 isoform X1"
                     /calculated_mol_wt=28269
     Region          194..246
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(194..195,198..199,201..202,206,224..225)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(204..205,208,211..212,215,225..226,229..230,233,236,
                     239..240,243,246)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..259
                     /gene="LOC107895069"
                     /coded_by="XM_016820279.2:306..1085"
                     /db_xref="GeneID:107895069"
ORIGIN      
        1 mkptpggsss ssgggaegsr aglarfrsap atwleallee eeedplkpsq cltqlltgns
       61 sstptirnsl lfpnsadpsg lfepsgfqrq nsspadflgn npaaasdayf snfgvaanyd
      121 ylsptmdvsp sskraseldt qfpptkfhsq lkgepsdqis ggisnlidvd meklledsvp
      181 crvrakrgca thprsiaerv rrtrisdrir klqelvpnmd kqtntadmle eaveyvkylq
      241 rqiqeltehq krckckakd
//
LOCUS       XP_016675769             233 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH81 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675769
VERSION     XP_016675769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..233
                     /product="transcription factor bHLH81 isoform X2"
                     /calculated_mol_wt=25171
     Region          183..>221
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..233
                     /gene="LOC107895069"
                     /coded_by="XM_016820280.2:303..1004"
                     /db_xref="GeneID:107895069"
ORIGIN      
        1 mkptpggsss ssgggaegsr aglarfrsap atwleallee eeedplkpsq cltqlltgns
       61 sstptirnsl lfpnsadpsg lfepsgfqrq nsspadflgn npaaasdayf snfgvaanyd
      121 ylsptmdvsp sskraseldt qfpptkfhsq lkgepsdqis ggisnlidvd meklledsvp
      181 crvrakrgca thprsiaerv rrtrisdrir klqelvpnmd kqikrypska lrl
//
LOCUS       XP_016675771             685 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g13880 [Gossypium
            hirsutum].
ACCESSION   XP_016675771
VERSION     XP_016675771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820282.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..685
                     /product="pentatricopeptide repeat-containing protein
                     At3g13880"
                     /calculated_mol_wt=76433
     Region          76..685
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          98..127
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          133..192
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          199..228
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          234..265
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          271..300
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          304..336
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          342..395
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          410..437
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          511..538
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          544..573
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..685
                     /gene="LOC107895070"
                     /coded_by="XM_016820282.2:132..2189"
                     /db_xref="GeneID:107895070"
ORIGIN      
        1 mllektkllg lpkplvfhqf yqtcymhlsf dsvtytklvq hstksscllh gklahahiik
       61 safnpclfll nnllnmyska gemdvahrlf dkmfkpnlvs ynslisgytq mgafdkalqv
      121 fvearkaclk ldkftyagal nvctqtrdlk lekliyglis vsgliekvfl tnslidmyck
      181 cecvdqarfl fensqeldei swntliagyv rlnkkeeilk llismhrngl elntytmgsv
      241 lkacctntdv gimcgkmlhg cimklgfdid ivvgtalldv yakngelnsa iktfksmpnr
      301 nivmynamis gimetesisk ectneacrlf fevqrqglkp skftyssmlk aciavedfvy
      361 gkqihaqick ynlqsdefiv salielyslm gstedglkcf istprrdivl wtsmiagyiq
      421 ngqyesalsl fyelmacggr pdeftisnil sacadlatar lgeqvhghvv ksgfgsfriv
      481 qnsqicmyak cgnvnsadli fretenpdvv swsvmicsca qhgcakdaln lfglmkehgi
      541 rpnhityvgv lsacsygglv eeglkyfesm kddgveasie hyccvvdlfg ragrlaeaen
      601 filasgfknn pivwrallss crvykdsvag kraamkviel epqdsssyvl lhniyadaav
      661 eplaarirel mqqrgvrkep glswi
//
LOCUS       XP_016675774             496 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675774
VERSION     XP_016675774.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820285.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..496
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53447
     Region          <118..>258
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          284..387
                     /region_name="DUF4149"
                     /note="Domain of unknown function (DUF4149); pfam13664"
                     /db_xref="CDD:463949"
     CDS             1..496
                     /gene="LOC107895073"
                     /coded_by="XM_016820285.2:26..1516"
                     /db_xref="GeneID:107895073"
ORIGIN      
        1 mtnglvlsll vvsslamaaa vgsddvilke ghrvivveyd qdgkhktkvs isspslhlqt
       61 dqgeyfgket mkdaasalpn vghgisqgks gsgrhspgel icdafgkctq rvatalgktk
      121 dkvsdtahea nklkqtasgt aheakekvkd kawetaqevr ekvsetahet rdkvadtkga
      181 igdalgkakg avlqkgqdvk erakesidka keavttakdt aktmgadivt ntseqvenvq
      241 ekameeagra ankvktsank fldglkymts mealntvmgi anllglatay gmsvwvtfis
      301 syilagqlpr lqfgvvqski ypvyframay sigmallghl lwhrkrsiss ppevfqainl
      361 lstlfmvlvn glylepkatk vmfermkmek eegrgrhdfv aegsrvtesp svadpvakns
      421 rkgpstapap apapapapap avaptsseqe vikrtmrrln erlkklntns smlniltlma
      481 ltwhlvylgq rltlnc
//
LOCUS       XP_040942006             153 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942006
VERSION     XP_040942006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086072.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..153
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=17486
     CDS             1..153
                     /gene="LOC121212727"
                     /coded_by="XM_041086072.1:617..1078"
                     /db_xref="GeneID:121212727"
ORIGIN      
        1 mripeeqyhm tepcnnmymp npanvsspkv aettgyiiea tpvstlppea qaptskrryn
       61 klkpllefln nwivtesprk ngridkllty getgkqnekl etstmertns enmhmsnltt
      121 ststapkgrr grkrkmktvv sfrsrnqhws rte
//
LOCUS       XP_040942007             151 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942007
VERSION     XP_040942007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086073.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..151
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=17316
     CDS             1..151
                     /gene="LOC121212727"
                     /coded_by="XM_041086073.1:619..1074"
                     /db_xref="GeneID:121212727"
ORIGIN      
        1 mripeeqyhm tepcnnmymp npanvsspke ttgyiieatp vstlppeaqa ptskrrynkl
       61 kplleflnnw ivtesprkng ridklltyge tgkqneklet stmertnsen mhmsnlttst
      121 stapkgrrgr krkmktvvsf rsrnqhwsrt e
//
LOCUS       XP_040942008             532 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 93B16 [Gossypium hirsutum].
ACCESSION   XP_040942008
VERSION     XP_040942008.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086074.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..532
                     /product="cytochrome P450 93B16"
                     /calculated_mol_wt=60347
     Region          69..508
                     /region_name="CYP93"
                     /note="cytochrome P450 family 93; cd20655"
                     /db_xref="CDD:410748"
     Site            order(104,128,132,140,187,305,308..309,312..313,372,
                     375..376,378,448..451,454..458,461..462)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410748"
     Site            order(213,217,241,304,307..308,376)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410748"
     CDS             1..532
                     /gene="LOC107895096"
                     /coded_by="XM_041086074.1:133..1731"
                     /db_xref="GeneID:107895096"
ORIGIN      
        1 mvlqlamelp flsyaalfiv sflivrtvis irnhsklppg ptalpvighl hllspfihqt
       61 fqklssihga lmylrlgsve cvvvsnpela kellkhhelt fsarkhtaai dhltynssfa
      121 fapygtywkf ikklstfell gnrtlgqflp vrtkelhhfi silldkskst etvnlteell
      181 kltnnvisqm mmsircsgtg dqadgvrtlv revteifgef nvsdiiwffk nidvqgfrkr
      241 fldihcryds llekimrdre elrknkkpnd edvkdfldmm ldvfedehse iqltrnhika
      301 lildfltaat dttaiaiewa laelinnpek lrkaqqeldq vvgksrlvqe sdtqclpylq
      361 aiikesfrlh ppipmisrka vedckingyt ipaqsllfvn iwaigrdpkv wedplkfqpe
      421 rflkcnrpdt ninsgdidvk glhyqllpfg tgrrgcpgis lamqelpvtl aaliqcfdwk
      481 llnvdggvdm seragltapr ahdlkcvpla rftptlfste aancpksndf yi
//
LOCUS       XP_016675807             184 aa            linear   PLN 06-AUG-2024
DEFINITION  22.0 kDa class IV heat shock protein [Gossypium hirsutum].
ACCESSION   XP_016675807
VERSION     XP_016675807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..184
                     /product="22.0 kDa class IV heat shock protein"
                     /calculated_mol_wt=20545
     Region          59..150
                     /region_name="ACD_ScHsp26_like"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     cd06472"
                     /db_xref="CDD:107229"
     Site            order(59..65,72,74,76..77,99,104,107..115,117,122,
                     141..143)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107229"
     CDS             1..184
                     /gene="LOC107895097"
                     /coded_by="XM_016820318.2:443..997"
                     /db_xref="GeneID:107895097"
ORIGIN      
        1 mrllllllac cvglcngssl lpfmdpgsgs lllpdpfrvl eqipltlerd eslalsparv
       61 dwketaeght imldvpglkk eelkieveen rvlrvsgerk reeekkgdhw hrversygkf
      121 wrqfrlpenv dldtvkakle dgvltlsltk lspdkikgpr vvdiaggean eapklqgnda
      181 kqel
//
LOCUS       XP_016675809             161 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675809
VERSION     XP_016675809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..161
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=18373
     Region          <88..159
                     /region_name="DUF1997"
                     /note="Protein of unknown function (DUF1997); cl09620"
                     /db_xref="CDD:471902"
     CDS             1..161
                     /gene="LOC107895099"
                     /coded_by="XM_016820320.2:557..1042"
                     /db_xref="GeneID:107895099"
ORIGIN      
        1 mddedkikav dteldqslkn mlptkgsrac pederdvdqr ngvgknssrv qklwnakmti
       61 fsfcergkaa yirptpiynq dpcalaimin hitwdtnmfe pflevdvkln lrleiytrpf
      121 illptsaveg prnikiqall drliplllqq vvqdcsnwvq l
//
LOCUS       XP_016675814             141 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675814
VERSION     XP_016675814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820325.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..141
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=16084
     Region          <68..139
                     /region_name="DUF1997"
                     /note="Protein of unknown function (DUF1997); cl09620"
                     /db_xref="CDD:471902"
     CDS             1..141
                     /gene="LOC107895099"
                     /coded_by="XM_016820325.2:451..876"
                     /db_xref="GeneID:107895099"
ORIGIN      
        1 mlptkgsrac pederdvdqr ngvgknssrv qklwnakmti fsfcergkaa yirptpiynq
       61 dpcalaimin hitwdtnmfe pflevdvkln lrleiytrpf illptsaveg prnikiqall
      121 drliplllqq vvqdcsnwvq l
//
LOCUS       XP_016675811             141 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675811
VERSION     XP_016675811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..141
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=16084
     Region          <68..139
                     /region_name="DUF1997"
                     /note="Protein of unknown function (DUF1997); cl09620"
                     /db_xref="CDD:471902"
     CDS             1..141
                     /gene="LOC107895099"
                     /coded_by="XM_016820322.2:420..845"
                     /db_xref="GeneID:107895099"
ORIGIN      
        1 mlptkgsrac pederdvdqr ngvgknssrv qklwnakmti fsfcergkaa yirptpiynq
       61 dpcalaimin hitwdtnmfe pflevdvkln lrleiytrpf illptsaveg prnikiqall
      121 drliplllqq vvqdcsnwvq l
//
LOCUS       XP_016675816            1371 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016675816
VERSION     XP_016675816.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820327.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675816.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1371
                     /product="DEAD-box ATP-dependent RNA helicase FANCM
                     isoform X1"
                     /calculated_mol_wt=152643
     Region          121..>614
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     CDS             1..1371
                     /gene="LOC107895100"
                     /coded_by="XM_016820327.2:148..4263"
                     /db_xref="GeneID:107895100"
ORIGIN      
        1 masniplhii dddgdgdgqd efdweaavre idkacetrns sssshfaayp plphiskkns
       61 srqstldrfi gklgprppdn hrmvdveaea eaeaeadevs fvqidaeaak twiypvnvpl
      121 rdyqfaitkt alfsntlval ptglgktlia aviiynyfrw fpegkivfaa psrplvmqqi
      181 eachnivgip qewtidmtgq icpskranfw ktkrvffvtp qvlekdiqsg tclskylvcl
      241 videahramg nysycvavre lmsmpvqlri laltatpgsk qpaiqqiidn lyistleyrn
      301 ehdhdvspyv hnrkieliev plgqdasdvn nklleiirpy vaklhangli qnrdyqtlsp
      361 vdllssrdkf rqappldlph vkhgeveayf avlitlyhir kllsshgirp ayemleeklr
      421 qgpfsrlmik nedlmnakll mqrslshgap spklskllev linhfqtrdp qnsrviifsn
      481 frgsvrdimn alesirdlvk atefigqssg kalkgqsqkv qqavlekfra ggynvivats
      541 igeegldime vdlvicfdan vsplrmiqrm grtgrkhdgr vvvlacqgse lkgymrkqas
      601 srslnkhmrn ggmnsfsfhs sprmiphifk pevqfvelsi eqfvprgkkl kddhvmetpp
      661 frekltvaet dliakyfhpt sestwrpsli afpsfqafps kvckvmhscr tvmlidsmqh
      721 lhgltfpggn gnffvedevs sadhsvagiv eqhdsptkdf paldncqaan fqlgltdsae
      781 splrtsrtke khgrdsgcgs pqahsfvfds dfvsvdacgk vlilsvpsly redvmhskha
      841 skitnellns lkqearsvkt ldeimqteav qnitvcleks ieldtlstpr fcetdfekek
      901 mlnevekipe tpdgtcemad eanidlrdte lsprltnlik sgvvpespia dsgllkherr
      961 nesfipdqas spklctelil rssspvesdg gnqensshgr kvsimkdemi pkmnpvsstr
     1021 cspisplvve mksplvnltn scgskswhls sgekaetvep vrvfkrlrkv gncgkdrssk
     1081 imkenslvsl anhakslsga nptqtksgrg kkkpgndvrt fideeaevst eaevsteetd
     1141 desdsyddsf iddrinltag stliesgrvd mmavyrrsll tqspmveqmt csafspdcva
     1201 stskdpgsgc ssdktlysll lpqpesinqt aaknmeeris svsmprrsyd sevenqtlqs
     1261 rkrklsffql esipainleq efqsevggke lsnasqmpqv nnvtgndndf ddyddddqfy
     1321 asldldavea qatmllknks kpsmekqein aqpnlqnggh qgspsfdlgi w
//
LOCUS       XP_040942009            1370 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942009
VERSION     XP_040942009.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086075.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1370
                     /product="DEAD-box ATP-dependent RNA helicase FANCM
                     isoform X2"
                     /calculated_mol_wt=152514
     Region          120..>613
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     CDS             1..1370
                     /gene="LOC107895100"
                     /coded_by="XM_041086075.1:145..4257"
                     /db_xref="GeneID:107895100"
ORIGIN      
        1 masniplhii dddgdgdgqd fdweaavrei dkacetrnss ssshfaaypp lphiskknss
       61 rqstldrfig klgprppdnh rmvdveaeae aeaeadevsf vqidaeaakt wiypvnvplr
      121 dyqfaitkta lfsntlvalp tglgktliaa viiynyfrwf pegkivfaap srplvmqqie
      181 achnivgipq ewtidmtgqi cpskranfwk tkrvffvtpq vlekdiqsgt clskylvclv
      241 ideahramgn ysycvavrel msmpvqlril altatpgskq paiqqiidnl yistleyrne
      301 hdhdvspyvh nrkielievp lgqdasdvnn klleiirpyv aklhangliq nrdyqtlspv
      361 dllssrdkfr qappldlphv khgeveayfa vlitlyhirk llsshgirpa yemleeklrq
      421 gpfsrlmikn edlmnakllm qrslshgaps pklskllevl inhfqtrdpq nsrviifsnf
      481 rgsvrdimna lesirdlvka tefigqssgk alkgqsqkvq qavlekfrag gynvivatsi
      541 geegldimev dlvicfdanv splrmiqrmg rtgrkhdgrv vvlacqgsel kgymrkqass
      601 rslnkhmrng gmnsfsfhss prmiphifkp evqfvelsie qfvprgkklk ddhvmetppf
      661 rekltvaetd liakyfhpts estwrpslia fpsfqafpsk vckvmhscrt vmlidsmqhl
      721 hgltfpggng nffvedevss adhsvagive qhdsptkdfp aldncqaanf qlgltdsaes
      781 plrtsrtkek hgrdsgcgsp qahsfvfdsd fvsvdacgkv lilsvpslyr edvmhskhas
      841 kitnellnsl kqearsvktl deimqteavq nitvcleksi eldtlstprf cetdfekekm
      901 lnevekipet pdgtcemade anidlrdtel sprltnliks gvvpespiad sgllkherrn
      961 esfipdqass pklctelilr ssspvesdgg nqensshgrk vsimkdemip kmnpvsstrc
     1021 spisplvvem ksplvnltns cgskswhlss gekaetvepv rvfkrlrkvg ncgkdrsski
     1081 mkenslvsla nhakslsgan ptqtksgrgk kkpgndvrtf ideeaevste aevsteetdd
     1141 esdsyddsfi ddrinltags tliesgrvdm mavyrrsllt qspmveqmtc safspdcvas
     1201 tskdpgsgcs sdktlyslll pqpesinqta aknmeeriss vsmprrsyds evenqtlqsr
     1261 krklsffqle sipainleqe fqsevggkel snasqmpqvn nvtgndndfd dyddddqfya
     1321 sldldaveaq atmllknksk psmekqeina qpnlqngghq gspsfdlgiw
//
LOCUS       XP_040942010            1195 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942010
VERSION     XP_040942010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086076.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1195
                     /product="DEAD-box ATP-dependent RNA helicase FANCM
                     isoform X3"
                     /calculated_mol_wt=133168
     Region          13..>438
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     CDS             1..1195
                     /gene="LOC107895100"
                     /coded_by="XM_041086076.1:387..3974"
                     /db_xref="GeneID:107895100"
ORIGIN      
        1 mqqieachni vgipqewtid mtgqicpskr anfwktkrvf fvtpqvlekd iqsgtclsky
       61 lvclvideah ramgnysycv avrelmsmpv qlrilaltat pgskqpaiqq iidnlyistl
      121 eyrnehdhdv spyvhnrkie lievplgqda sdvnnkllei irpyvaklha ngliqnrdyq
      181 tlspvdllss rdkfrqappl dlphvkhgev eayfavlitl yhirkllssh girpayemle
      241 eklrqgpfsr lmiknedlmn akllmqrsls hgapspklsk llevlinhfq trdpqnsrvi
      301 ifsnfrgsvr dimnalesir dlvkatefig qssgkalkgq sqkvqqavle kfraggynvi
      361 vatsigeegl dimevdlvic fdanvsplrm iqrmgrtgrk hdgrvvvlac qgselkgymr
      421 kqassrslnk hmrnggmnsf sfhssprmip hifkpevqfv elsieqfvpr gkklkddhvm
      481 etppfreklt vaetdliaky fhptsestwr psliafpsfq afpskvckvm hscrtvmlid
      541 smqhlhgltf pggngnffve devssadhsv agiveqhdsp tkdfpaldnc qaanfqlglt
      601 dsaesplrts rtkekhgrds gcgspqahsf vfdsdfvsvd acgkvlilsv pslyredvmh
      661 skhaskitne llnslkqear svktldeimq teavqnitvc leksieldtl stprfcetdf
      721 ekekmlneve kipetpdgtc emadeanidl rdtelsprlt nliksgvvpe spiadsgllk
      781 herrnesfip dqasspklct elilrssspv esdggnqens shgrkvsimk demipkmnpv
      841 sstrcspisp lvvemksplv nltnscgsks whlssgekae tvepvrvfkr lrkvgncgkd
      901 rsskimkens lvslanhaks lsganptqtk sgrgkkkpgn dvrtfideea evsteaevst
      961 eetddesdsy ddsfiddrin ltagstlies grvdmmavyr rslltqspmv eqmtcsafsp
     1021 dcvastskdp gsgcssdktl yslllpqpes inqtaaknme erissvsmpr rsydsevenq
     1081 tlqsrkrkls ffqlesipai nleqefqsev ggkelsnasq mpqvnnvtgn dndfddyddd
     1141 dqfyasldld aveaqatmll knkskpsmek qeinaqpnlq ngghqgspsf dlgiw
//
LOCUS       XP_040942011            1182 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942011
VERSION     XP_040942011.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086077.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1182
                     /product="DEAD-box ATP-dependent RNA helicase FANCM
                     isoform X4"
                     /calculated_mol_wt=131769
     Region          9..>425
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     CDS             1..1182
                     /gene="LOC107895100"
                     /coded_by="XM_041086077.1:404..3952"
                     /db_xref="GeneID:107895100"
ORIGIN      
        1 mpqycwnsts qicpskranf wktkrvffvt pqvlekdiqs gtclskylvc lvideahram
       61 gnysycvavr elmsmpvqlr ilaltatpgs kqpaiqqiid nlyistleyr nehdhdvspy
      121 vhnrkielie vplgqdasdv nnklleiirp yvaklhangl iqnrdyqtls pvdllssrdk
      181 frqappldlp hvkhgeveay favlitlyhi rkllsshgir payemleekl rqgpfsrlmi
      241 knedlmnakl lmqrslshga pspklsklle vlinhfqtrd pqnsrviifs nfrgsvrdim
      301 nalesirdlv katefigqss gkalkgqsqk vqqavlekfr aggynvivat sigeegldim
      361 evdlvicfda nvsplrmiqr mgrtgrkhdg rvvvlacqgs elkgymrkqa ssrslnkhmr
      421 nggmnsfsfh ssprmiphif kpevqfvels ieqfvprgkk lkddhvmetp pfrekltvae
      481 tdliakyfhp tsestwrpsl iafpsfqafp skvckvmhsc rtvmlidsmq hlhgltfpgg
      541 ngnffvedev ssadhsvagi veqhdsptkd fpaldncqaa nfqlgltdsa esplrtsrtk
      601 ekhgrdsgcg spqahsfvfd sdfvsvdacg kvlilsvpsl yredvmhskh askitnelln
      661 slkqearsvk tldeimqtea vqnitvclek sieldtlstp rfcetdfeke kmlnevekip
      721 etpdgtcema deanidlrdt elsprltnli ksgvvpespi adsgllkher rnesfipdqa
      781 sspklcteli lrssspvesd ggnqensshg rkvsimkdem ipkmnpvsst rcspisplvv
      841 emksplvnlt nscgskswhl ssgekaetve pvrvfkrlrk vgncgkdrss kimkenslvs
      901 lanhakslsg anptqtksgr gkkkpgndvr tfideeaevs teaevsteet ddesdsydds
      961 fiddrinlta gstliesgrv dmmavyrrsl ltqspmveqm tcsafspdcv astskdpgsg
     1021 cssdktlysl llpqpesinq taaknmeeri ssvsmprrsy dsevenqtlq srkrklsffq
     1081 lesipainle qefqsevggk elsnasqmpq vnnvtgndnd fddyddddqf yasldldave
     1141 aqatmllknk skpsmekqei naqpnlqngg hqgspsfdlg iw
//
LOCUS       XP_016675817            1123 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_016675817
VERSION     XP_016675817.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675817.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1123
                     /product="DEAD-box ATP-dependent RNA helicase FANCM
                     isoform X5"
                     /calculated_mol_wt=124920
     Region          2..>366
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     CDS             1..1123
                     /gene="LOC107895100"
                     /coded_by="XM_016820328.2:167..3538"
                     /db_xref="GeneID:107895100"
ORIGIN      
        1 mgnysycvav relmsmpvql rilaltatpg skqpaiqqii dnlyistley rnehdhdvsp
       61 yvhnrkieli evplgqdasd vnnklleiir pyvaklhang liqnrdyqtl spvdllssrd
      121 kfrqappldl phvkhgevea yfavlitlyh irkllsshgi rpayemleek lrqgpfsrlm
      181 iknedlmnak llmqrslshg apspklskll evlinhfqtr dpqnsrviif snfrgsvrdi
      241 mnalesirdl vkatefigqs sgkalkgqsq kvqqavlekf raggynviva tsigeegldi
      301 mevdlvicfd anvsplrmiq rmgrtgrkhd grvvvlacqg selkgymrkq assrslnkhm
      361 rnggmnsfsf hssprmiphi fkpevqfvel sieqfvprgk klkddhvmet ppfrekltva
      421 etdliakyfh ptsestwrps liafpsfqaf pskvckvmhs crtvmlidsm qhlhgltfpg
      481 gngnffvede vssadhsvag iveqhdsptk dfpaldncqa anfqlgltds aesplrtsrt
      541 kekhgrdsgc gspqahsfvf dsdfvsvdac gkvlilsvps lyredvmhsk haskitnell
      601 nslkqearsv ktldeimqte avqnitvcle ksieldtlst prfcetdfek ekmlneveki
      661 petpdgtcem adeanidlrd telsprltnl iksgvvpesp iadsgllkhe rrnesfipdq
      721 asspklctel ilrssspves dggnqenssh grkvsimkde mipkmnpvss trcspisplv
      781 vemksplvnl tnscgskswh lssgekaetv epvrvfkrlr kvgncgkdrs skimkenslv
      841 slanhaksls ganptqtksg rgkkkpgndv rtfideeaev steaevstee tddesdsydd
      901 sfiddrinlt agstliesgr vdmmavyrrs lltqspmveq mtcsafspdc vastskdpgs
      961 gcssdktlys lllpqpesin qtaaknmeer issvsmprrs ydsevenqtl qsrkrklsff
     1021 qlesipainl eqefqsevgg kelsnasqmp qvnnvtgndn dfddyddddq fyasldldav
     1081 eaqatmllkn kskpsmekqe inaqpnlqng ghqgspsfdl giw
//
LOCUS       XP_016675818             557 aa            linear   PLN 06-AUG-2024
DEFINITION  probable alkaline/neutral invertase D [Gossypium hirsutum].
ACCESSION   XP_016675818
VERSION     XP_016675818.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675818.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..557
                     /product="probable alkaline/neutral invertase D"
                     /calculated_mol_wt=63288
     Region          8..557
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; cl17340"
                     /db_xref="CDD:450179"
     CDS             1..557
                     /gene="LOC107895101"
                     /coded_by="XM_016820329.2:255..1928"
                     /db_xref="GeneID:107895101"
ORIGIN      
        1 mdgaketglr nvsstcsise sddydlsrll dkprlnierq rsfderslge lsiglargah
       61 dnyetthspg wrsgfntpas sarnsfephp mvadawealr rslvyfkgqp vgtiaaydha
      121 seevlnydqv fvrdfvpsal aflmngepei vknflvktlh lqgwekridr fklgegampa
      181 sfkvlhdpvr ksdtiiadfg esaigrvapv dsgfwwiill raytkstgdl slaetpecqk
      241 gmrliltlcl segfdtfptl lcadgcsmid rrmgiygypi eiqalffmal rcalsmlkhd
      301 aegkecieri vkrlhalsyh mrsyfwldfq qlndiyrykt eeyshtavnk fnvipdsipd
      361 wvfdfmptrg gyfignvspa rmdfrwfclg nciailssla tpeqsmaimd liearwdelv
      421 gemplkiayp aieshewriv tgcdpkntrw syhnggswpv llwlltaaci ktgrpqiarr
      481 aidlaetrll kdgwpeyydg klgryvgkqa rkyqtwsiag ylvakmmmed pshlgmisle
      541 edkqmkplik rssswtc
//
LOCUS       XP_016675819             557 aa            linear   PLN 06-AUG-2024
DEFINITION  probable alkaline/neutral invertase D [Gossypium hirsutum].
ACCESSION   XP_016675819
VERSION     XP_016675819.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675819.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..557
                     /product="probable alkaline/neutral invertase D"
                     /calculated_mol_wt=63288
     Region          8..557
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; cl17340"
                     /db_xref="CDD:450179"
     CDS             1..557
                     /gene="LOC107895101"
                     /coded_by="XM_016820330.2:424..2097"
                     /db_xref="GeneID:107895101"
ORIGIN      
        1 mdgaketglr nvsstcsise sddydlsrll dkprlnierq rsfderslge lsiglargah
       61 dnyetthspg wrsgfntpas sarnsfephp mvadawealr rslvyfkgqp vgtiaaydha
      121 seevlnydqv fvrdfvpsal aflmngepei vknflvktlh lqgwekridr fklgegampa
      181 sfkvlhdpvr ksdtiiadfg esaigrvapv dsgfwwiill raytkstgdl slaetpecqk
      241 gmrliltlcl segfdtfptl lcadgcsmid rrmgiygypi eiqalffmal rcalsmlkhd
      301 aegkecieri vkrlhalsyh mrsyfwldfq qlndiyrykt eeyshtavnk fnvipdsipd
      361 wvfdfmptrg gyfignvspa rmdfrwfclg nciailssla tpeqsmaimd liearwdelv
      421 gemplkiayp aieshewriv tgcdpkntrw syhnggswpv llwlltaaci ktgrpqiarr
      481 aidlaetrll kdgwpeyydg klgryvgkqa rkyqtwsiag ylvakmmmed pshlgmisle
      541 edkqmkplik rssswtc
//
LOCUS       XP_040942012             789 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component SEC15A [Gossypium hirsutum].
ACCESSION   XP_040942012
VERSION     XP_040942012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086078.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..789
                     /product="exocyst complex component SEC15A"
                     /calculated_mol_wt=88703
     Region          442..753
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..789
                     /gene="LOC107920128"
                     /coded_by="XM_041086078.1:214..2583"
                     /db_xref="GeneID:107920128"
ORIGIN      
        1 mdskpkkrga mengdtgeds vlatligngd dlgplvrhaf emgrlealvh qlkhilkkke
       61 aeieelckth yeefilavde lrgvlvdaee lksdlssdnf klqevgsall vkleellesf
      121 sikknvaeai nmskicievl elcvkcnthl segqfflalk tvdlidtnyl qnipvntiki
      181 migknipiik ahiekkvtad fnewllhirs sakdigqtai ghaasvrqrd eemlerqrka
      241 eelnvsglgd vvysldveev dedsvlkfdl tplyrashih sflgiqeqfr ryyykngllq
      301 lnsdlqisss qpfvesyqay laqiagyfiv edrvlrtsgg llsadqvetm wettvakvvs
      361 vleeqfshmd sathlllvkd yiallgvtlr qygyevssil evldnsrdky hellfeecrq
      421 qisnvlsnds ynmmvmnkds dyennvlafh lqtsdvmpaf pyiapfssmv pdccrivrsf
      481 ikssvdylsf gvnsnfydaa rkyldkllid vlnevvvttv qsdgiaetqa mqiaenipfl
      541 erscdfflqh aahlcgipvr sverpqaslt akvvfktsrh aaylavvnsv nskldnflal
      601 teninwtaee isennseymn evvfcldtvf stalrilpld alytvgcgal ehisnsivaa
      661 flsdsvkrfn anavmvinqd lqklesfade rfhstglsev ykegsfrssl iearqlinll
      721 sssqpdnfad lvireksyna ldckkvasiv ekfkdsadgi fgslstrntk tssrkksmdm
      781 lkkrlkdfn
//
LOCUS       XP_016704464             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016704464
VERSION     XP_016704464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848975.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18019
     CDS             1..158
                     /gene="LOC107919530"
                     /coded_by="XM_016848975.2:54..530"
                     /db_xref="GeneID:107919530"
ORIGIN      
        1 mrfvwflrky fihvwkifft tslfhfpekm ldlteipkld lassneistq kisvsdhigg
       61 fqytvdkhds fvidmdsfsy gglnkginqn pritvpiqvn kylaysdgmr viesgklsvq
      121 stasdvlpha eldqlvlesl wrlhllslli eldslkia
//
LOCUS       XP_040942013             406 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-(1,4)-fucosyltransferase [Gossypium hirsutum].
ACCESSION   XP_040942013
VERSION     XP_040942013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086079.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="alpha-(1,4)-fucosyltransferase"
                     /calculated_mol_wt=45626
     Region          221..401
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..406
                     /gene="LOC107895104"
                     /coded_by="XM_041086079.1:132..1352"
                     /db_xref="GeneID:107895104"
ORIGIN      
        1 mqlkplntft vtlmlfftfl ilffsgflef psvsssiqqp fttpsltlss npnpftdlls
       61 afktwdsqmg csqfklkhhd lirllsnssg slqepvshss cnllkmehvs vlvkgwtwip
      121 dnldnlyscq cgmsclwtks pvladkpdal lfetatpplq rhsgdplrvy mdleagrrrs
      181 gredlfisyh akddvqstya galfhngrny hissyknnet lvywsssrcl sqrnqlaksf
      241 lrllphhsfg kclnnvggld malsfypect ndantpkwwd hlhcamsqyk fvlaientvt
      301 esyvteklfy aldsgavpiy fgapnvldfv pphsiidgtk frsmeelasy vkalandpva
      361 yaeyhawrrc gvlgnyakar atsldtlpcr lceavskkgg rnarte
//
LOCUS       XP_016675823             406 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-(1,4)-fucosyltransferase [Gossypium hirsutum].
ACCESSION   XP_016675823
VERSION     XP_016675823.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820334.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675823.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="alpha-(1,4)-fucosyltransferase"
                     /calculated_mol_wt=45626
     Region          221..401
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..406
                     /gene="LOC107895104"
                     /coded_by="XM_016820334.2:132..1352"
                     /db_xref="GeneID:107895104"
ORIGIN      
        1 mqlkplntft vtlmlfftfl ilffsgflef psvsssiqqp fttpsltlss npnpftdlls
       61 afktwdsqmg csqfklkhhd lirllsnssg slqepvshss cnllkmehvs vlvkgwtwip
      121 dnldnlyscq cgmsclwtks pvladkpdal lfetatpplq rhsgdplrvy mdleagrrrs
      181 gredlfisyh akddvqstya galfhngrny hissyknnet lvywsssrcl sqrnqlaksf
      241 lrllphhsfg kclnnvggld malsfypect ndantpkwwd hlhcamsqyk fvlaientvt
      301 esyvteklfy aldsgavpiy fgapnvldfv pphsiidgtk frsmeelasy vkalandpva
      361 yaeyhawrrc gvlgnyakar atsldtlpcr lceavskkgg rnarte
//
LOCUS       XP_016675824             406 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-(1,4)-fucosyltransferase [Gossypium hirsutum].
ACCESSION   XP_016675824
VERSION     XP_016675824.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675824.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..406
                     /product="alpha-(1,4)-fucosyltransferase"
                     /calculated_mol_wt=45626
     Region          221..401
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..406
                     /gene="LOC107895104"
                     /coded_by="XM_016820335.2:132..1352"
                     /db_xref="GeneID:107895104"
ORIGIN      
        1 mqlkplntft vtlmlfftfl ilffsgflef psvsssiqqp fttpsltlss npnpftdlls
       61 afktwdsqmg csqfklkhhd lirllsnssg slqepvshss cnllkmehvs vlvkgwtwip
      121 dnldnlyscq cgmsclwtks pvladkpdal lfetatpplq rhsgdplrvy mdleagrrrs
      181 gredlfisyh akddvqstya galfhngrny hissyknnet lvywsssrcl sqrnqlaksf
      241 lrllphhsfg kclnnvggld malsfypect ndantpkwwd hlhcamsqyk fvlaientvt
      301 esyvteklfy aldsgavpiy fgapnvldfv pphsiidgtk frsmeelasy vkalandpva
      361 yaeyhawrrc gvlgnyakar atsldtlpcr lceavskkgg rnarte
//
LOCUS       XP_040942014             129 aa            linear   PLN 06-AUG-2024
DEFINITION  subtilisin-like protease SBT3.17 [Gossypium hirsutum].
ACCESSION   XP_040942014
VERSION     XP_040942014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086080.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..129
                     /product="subtilisin-like protease SBT3.17"
                     /calculated_mol_wt=13514
     Region          46..122
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     CDS             1..129
                     /gene="LOC107893733"
                     /coded_by="XM_041086080.1:235..624"
                     /db_xref="GeneID:107893733"
ORIGIN      
        1 msinifpilf csiialccli qmaestdatk sssaaaaaag gtdaavhivy terpqdeqpe
       61 ayhirtlsnv lgseeaakea liysyktaas gfsakltpqq vaeiskqlgv lqvvpsrtlq
      121 lhsgpgklh
//
LOCUS       XP_016674289             585 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase G [Gossypium hirsutum].
ACCESSION   XP_016674289
VERSION     XP_016674289.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818800.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..585
                     /product="peptidyl-prolyl cis-trans isomerase G"
                     /calculated_mol_wt=67080
     Region          <189..>366
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     Region          308..369
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(336..338,346,349..350,353..354)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          417..576
                     /region_name="DUF3752"
                     /note="Protein of unknown function (DUF3752); pfam12572"
                     /db_xref="CDD:463632"
     CDS             1..585
                     /gene="LOC107893734"
                     /coded_by="XM_016818800.2:81..1838"
                     /db_xref="GeneID:107893734"
ORIGIN      
        1 mgrktrkkhv ddtptssssp stsddsessl erphrhrkvq rredessrre kerkrekrkr
       61 kekererkrr ksrredrrek rrdyesdsks gsgsssgsds eedkrrvepe vvvqqilkef
      121 pnvgndlkql lqmiddgqav dikgisersl nkhlkklfls lklkengdrv fllssksrpt
      181 ldvvghliqa htepkeqqrt nsglvkdahs ipehaessqv mdennsyrdd satpkrrvig
      241 pampsaella aaaklteaqa elreaeieed delfigpppp alvaeaesan eaerfeevtr
      301 ivgvesdcpy dviganrntt adnikkkywk lslmvhpdkc phpqahqafi ilnkafkelq
      361 dpdkrkalde kiklkeehee fkaelramhe aaqwrrlqgi smegddella evevkappkr
      421 dewmttlppe rkpgvtmqst kfsksakegr gdtsvwtdtp leraqkakmh yleayneaaa
      481 lasneeekmk rsssdadlvd kynkekrsks lvqkhqeeas krpkkkskqq sekekdeweg
      541 khpwkpwdre kdltagrqsv nldtenmvkg ltsrfstgsf qrnfl
//
LOCUS       XP_016675829             321 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 30 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675829
VERSION     XP_016675829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..321
                     /product="NAC domain-containing protein 30 isoform X1"
                     /calculated_mol_wt=37150
     Region          16..143
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..321
                     /gene="LOC107895107"
                     /coded_by="XM_016820340.2:317..1282"
                     /db_xref="GeneID:107895107"
ORIGIN      
        1 mfsrsrsmme lescvppgfr fhpteeelvg yylrrkinsl kidldviiei dlykmepwdi
       61 qarcnvgnee qsewyffsyk drkyptgtrt nrataagfwk atgrdksvls knsiigmrkt
      121 lvfykgrapn grktdwimhe yrlqtsehgp pqeegwvvcr afrkpcpnqr qgfeawshgy
      181 ymrdnsqvrp pvslsdiatt shlhlrrnqg ssfyesygse qelvsnthnf ldnqqvielp
      241 qldspitvsp slaekevfhc deeksnessq ihiidwknfd nlfnsqltdt tsypyqtaal
      301 ipqndeleaq qhhllgcfpg s
//
LOCUS       XP_016675830             314 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 30 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675830
VERSION     XP_016675830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="NAC domain-containing protein 30 isoform X2"
                     /calculated_mol_wt=36298
     Region          9..136
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..314
                     /gene="LOC107895107"
                     /coded_by="XM_016820341.2:231..1175"
                     /db_xref="GeneID:107895107"
ORIGIN      
        1 mmelescvpp gfrfhpteee lvgyylrrki nslkidldvi ieidlykmep wdiqarcnvg
       61 neeqsewyff sykdrkyptg trtnrataag fwkatgrdks vlsknsiigm rktlvfykgr
      121 apngrktdwi mheyrlqtse hgppqeegwv vcrafrkpcp nqrqgfeaws hgyymrdnsq
      181 vrppvslsdi attshlhlrr nqgssfyesy gseqelvsnt hnfldnqqvi elpqldspit
      241 vspslaekev fhcdeeksne ssqihiidwk nfdnlfnsql tdttsypyqt aalipqndel
      301 eaqqhhllgc fpgs
//
LOCUS       XP_016675826             333 aa            linear   PLN 06-AUG-2024
DEFINITION  tetratricopeptide repeat domain-containing protein PYG7,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675826
VERSION     XP_016675826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..333
                     /product="tetratricopeptide repeat domain-containing
                     protein PYG7, chloroplastic isoform X1"
                     /calculated_mol_wt=37288
     Region          171..320
                     /region_name="Ycf37"
                     /note="Photosystem I assembly protein Ycf37, contains TPR
                     repeats [Energy production and conversion]; COG5714"
                     /db_xref="CDD:444424"
     Region          201..229
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(202,205..206,209..210,212,240,243..244,247..248,
                     250..251,274,277..278,281..282,285)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          238..268
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          273..300
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..333
                     /gene="LOC107895106"
                     /coded_by="XM_016820337.2:237..1238"
                     /db_xref="GeneID:107895106"
ORIGIN      
        1 mllqttissr plyqrhacfs athqlplyys flasaslnft rknlffqaiv rcsrepalkn
       61 tgagngvndt kflnlqmfqk gmaaksftss rfdeslknhl amvddlnvkk plsvvsaflf
      121 gqalrlisaq lanaseitsg davyeigelf elgiqlsyll lllgllgvgt ffvirqvlvr
      181 reldlsakel qeqvrsgdas atelfelgav mlrrkfypaa nkfllqaiek wdgddqdlaq
      241 vynalgvsyv rdgklekgin qfetavkiqp gyvtawnnlg dayekkkdyk salkafeevl
      301 lfdpnnkiar prrdalkdrv emykgvpiks kdr
//
LOCUS       XP_016675827             267 aa            linear   PLN 06-AUG-2024
DEFINITION  tetratricopeptide repeat domain-containing protein PYG7,
            chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675827
VERSION     XP_016675827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..267
                     /product="tetratricopeptide repeat domain-containing
                     protein PYG7, chloroplastic isoform X2"
                     /calculated_mol_wt=29966
     Region          105..254
                     /region_name="Ycf37"
                     /note="Photosystem I assembly protein Ycf37, contains TPR
                     repeats [Energy production and conversion]; COG5714"
                     /db_xref="CDD:444424"
     Region          135..163
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(136,139..140,143..144,146,174,177..178,181..182,
                     184..185,208,211..212,215..216,219)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          172..202
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          207..234
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..267
                     /gene="LOC107895106"
                     /coded_by="XM_016820338.2:62..865"
                     /db_xref="GeneID:107895106"
ORIGIN      
        1 mtlnfstyrq mfqkgmaaks ftssrfdesl knhlamvddl nvkkplsvvs aflfgqalrl
       61 isaqlanase itsgdavyei gelfelgiql sylllllgll gvgtffvirq vlvrreldls
      121 akelqeqvrs gdasatelfe lgavmlrrkf ypaankfllq aiekwdgddq dlaqvynalg
      181 vsyvrdgkle kginqfetav kiqpgyvtaw nnlgdayekk kdyksalkaf eevllfdpnn
      241 kiarprrdal kdrvemykgv pikskdr
//
LOCUS       XP_016675825             500 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose transport protein SUC8 [Gossypium hirsutum].
ACCESSION   XP_016675825
VERSION     XP_016675825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820336.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..500
                     /product="sucrose transport protein SUC8"
                     /calculated_mol_wt=53370
     Region          10..486
                     /region_name="GPH_sucrose"
                     /note="GPH family sucrose/H+ symporter; TIGR01301"
                     /db_xref="CDD:273545"
     CDS             1..500
                     /gene="LOC107895105"
                     /coded_by="XM_016820336.2:139..1641"
                     /db_xref="GeneID:107895105"
ORIGIN      
        1 metgqtvtpi plwnivvisa iaagiqfgwa lqlslltpyv qtlgvphvwa afiwlcgpis
       61 glvvqpivgy ssdrctsrig rrrpfiavga cfvavavfmi gfakdighrs gdslqnptkp
      121 ravaifvtgf wildvannml qgpcraflad lssndhkrmr ianawfsffm avgnvlgyaa
      181 gsfsdlhkll pftqttacdv ycanlktcfi idivfllsit itaittvket pitrkeagde
      241 ednegrssgr pffaelvmaf ktlkkpmwil llvtclnwma wfpfllydtd wmgaevyggk
      301 vkgsasqqkl ydegvragal glminsivla faslglepvs rliggvknmw gvvnlilaac
      361 lagtvwitkv aeawrgehgp qiltppptri ktsalalfgl lgiplavtfs ipfalasiyc
      421 seegggqgls lgvlnlsivi pqmiisvisg pidaafgggn lpafvlgsil aaisallaif
      481 alpnpktqls lnstgmagah
//
LOCUS       XP_040942015             239 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942015
VERSION     XP_040942015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086081.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..239
                     /product="WD repeat-containing protein 3 homolog isoform
                     X1"
                     /calculated_mol_wt=26774
     Region          149..>235
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..239
                     /gene="LOC121203565"
                     /coded_by="XM_041086081.1:497..1216"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mviimkckrf llnilitnsd egimqmfgal qsatvvtlll qdlmtgpfav givlrslfll
       61 rkkkrrleei feadidntfe nkhipnsrgg sccisreekl etltatdsii daldvaevel
      121 kriaehedek argkvaefqp nmimlglsps dyvlralsyi stndleqtlq klfsaqalpf
      181 sdalkllsyt kdwtsnpdkv elvcrivkvl lqihhsqlis tpsarpvlav lkeiiyalq
//
LOCUS       XP_040942016             238 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942016
VERSION     XP_040942016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086082.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..238
                     /product="WD repeat-containing protein 3 homolog isoform
                     X2"
                     /calculated_mol_wt=26646
     Region          149..>234
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..238
                     /gene="LOC121203565"
                     /coded_by="XM_041086082.1:481..1197"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mviimkckrf llnilitnsd egimqmfgal qsatvvtlll qdlmtgpfav givlrslfll
       61 rkkkrrleei feadidntfe nkhipnsrgg sccisreekl etltatdsii daldvaevel
      121 kriaehedek argkvaefqp nmimlglsps dyvlralsyi stndleqtlq lfsaqalpfs
      181 dalkllsytk dwtsnpdkve lvcrivkvll qihhsqlist psarpvlavl keiiyalq
//
LOCUS       XP_040942017             235 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942017
VERSION     XP_040942017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086083.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..235
                     /product="WD repeat-containing protein 3 homolog isoform
                     X3"
                     /calculated_mol_wt=26345
     Region          145..>231
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..235
                     /gene="LOC121203565"
                     /coded_by="XM_041086083.1:481..1188"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mviimkckrf llnilitnsd emfgalqsat vvtlllqdlm tgpfavgivl rslfllrkkk
       61 rrleeifead idntfenkhi pnsrggscci sreekletlt atdsiidald vaevelkria
      121 ehedekargk vaefqpnmim lglspsdyvl ralsyistnd leqtlqklfs aqalpfsdal
      181 kllsytkdwt snpdkvelvc rivkvllqih hsqlistpsa rpvlavlkei iyalq
//
LOCUS       XP_040942018             216 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942018
VERSION     XP_040942018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086084.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="WD repeat-containing protein 3 homolog isoform
                     X4"
                     /calculated_mol_wt=24127
     Region          126..>212
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..216
                     /gene="LOC121203565"
                     /coded_by="XM_041086084.1:619..1269"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqklf saqalpfsda lkllsytkdw tsnpdkvelv
      181 crivkvllqi hhsqlistps arpvlavlke iiyalq
//
LOCUS       XP_040942019             216 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942019
VERSION     XP_040942019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086085.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="WD repeat-containing protein 3 homolog isoform
                     X4"
                     /calculated_mol_wt=24127
     Region          126..>212
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..216
                     /gene="LOC121203565"
                     /coded_by="XM_041086085.1:477..1127"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqklf saqalpfsda lkllsytkdw tsnpdkvelv
      181 crivkvllqi hhsqlistps arpvlavlke iiyalq
//
LOCUS       XP_040942020             216 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942020
VERSION     XP_040942020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086086.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="WD repeat-containing protein 3 homolog isoform
                     X4"
                     /calculated_mol_wt=24127
     Region          126..>212
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..216
                     /gene="LOC121203565"
                     /coded_by="XM_041086086.1:348..998"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqklf saqalpfsda lkllsytkdw tsnpdkvelv
      181 crivkvllqi hhsqlistps arpvlavlke iiyalq
//
LOCUS       XP_040942021             215 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040942021
VERSION     XP_040942021.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086087.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="WD repeat-containing protein 3 homolog isoform
                     X5"
                     /calculated_mol_wt=23999
     Region          126..>211
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..215
                     /gene="LOC121203565"
                     /coded_by="XM_041086087.1:603..1250"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqlfs aqalpfsdal kllsytkdwt snpdkvelvc
      181 rivkvllqih hsqlistpsa rpvlavlkei iyalq
//
LOCUS       XP_040942022             215 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040942022
VERSION     XP_040942022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086088.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="WD repeat-containing protein 3 homolog isoform
                     X5"
                     /calculated_mol_wt=23999
     Region          126..>211
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..215
                     /gene="LOC121203565"
                     /coded_by="XM_041086088.1:461..1108"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqlfs aqalpfsdal kllsytkdwt snpdkvelvc
      181 rivkvllqih hsqlistpsa rpvlavlkei iyalq
//
LOCUS       XP_040942023             214 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040942023
VERSION     XP_040942023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086089.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..214
                     /product="WD repeat-containing protein 3 homolog isoform
                     X6"
                     /calculated_mol_wt=23868
     Region          124..>210
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..214
                     /gene="LOC121203565"
                     /coded_by="XM_041086089.1:342..986"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mfgalqsatv vtlllqdlmt gpfavgivlr slfllrkkkr rleeifeadi dntfenkhip
       61 nsrggsccis reekletlta tdsiidaldv aevelkriae hedekargkv aefqpnmiml
      121 glspsdyvlr alsyistndl eqtlqklfsa qalpfsdalk llsytkdwts npdkvelvcr
      181 ivkvllqihh sqlistpsar pvlavlkeii yalq
//
LOCUS       XP_040942024             213 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X7 [Gossypium
            hirsutum].
ACCESSION   XP_040942024
VERSION     XP_040942024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086090.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..213
                     /product="WD repeat-containing protein 3 homolog isoform
                     X7"
                     /calculated_mol_wt=23740
     Region          124..>209
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..213
                     /gene="LOC121203565"
                     /coded_by="XM_041086090.1:342..983"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mfgalqsatv vtlllqdlmt gpfavgivlr slfllrkkkr rleeifeadi dntfenkhip
       61 nsrggsccis reekletlta tdsiidaldv aevelkriae hedekargkv aefqpnmiml
      121 glspsdyvlr alsyistndl eqtlqlfsaq alpfsdalkl lsytkdwtsn pdkvelvcri
      181 vkvllqihhs qlistpsarp vlavlkeiiy alq
//
LOCUS       XP_040942025             206 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X8 [Gossypium
            hirsutum].
ACCESSION   XP_040942025
VERSION     XP_040942025.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086091.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..206
                     /product="WD repeat-containing protein 3 homolog isoform
                     X8"
                     /calculated_mol_wt=23236
     CDS             1..206
                     /gene="LOC121203565"
                     /coded_by="XM_041086091.1:481..1101"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mviimkckrf llnilitnsd egimqmfgal qsatvvtlll qdlmtgpfav givlrslfll
       61 rkkkrrleei feadidntfe nkhipnsrgg sccisreekl etltatdsii daldvaevel
      121 kriaehedek argkvaefqp nmimlglsps dyvlralsyi stndleqtlq klfsaqalpf
      181 sdalkllsyt kdwtsnpdkq frrgyk
//
LOCUS       XP_040942026             205 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X9 [Gossypium
            hirsutum].
ACCESSION   XP_040942026
VERSION     XP_040942026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086092.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..205
                     /product="WD repeat-containing protein 3 homolog isoform
                     X9"
                     /calculated_mol_wt=23108
     CDS             1..205
                     /gene="LOC121203565"
                     /coded_by="XM_041086092.1:481..1098"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mviimkckrf llnilitnsd egimqmfgal qsatvvtlll qdlmtgpfav givlrslfll
       61 rkkkrrleei feadidntfe nkhipnsrgg sccisreekl etltatdsii daldvaevel
      121 kriaehedek argkvaefqp nmimlglsps dyvlralsyi stndleqtlq lfsaqalpfs
      181 dalkllsytk dwtsnpdkqf rrgyk
//
LOCUS       XP_040942028             183 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X10 [Gossypium
            hirsutum].
ACCESSION   XP_040942028
VERSION     XP_040942028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086094.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="WD repeat-containing protein 3 homolog isoform
                     X10"
                     /calculated_mol_wt=20589
     CDS             1..183
                     /gene="LOC121203565"
                     /coded_by="XM_041086094.1:675..1226"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqklf saqalpfsda lkllsytkdw tsnpdkqfrr
      181 gyk
//
LOCUS       XP_040942029             183 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X10 [Gossypium
            hirsutum].
ACCESSION   XP_040942029
VERSION     XP_040942029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086095.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="WD repeat-containing protein 3 homolog isoform
                     X10"
                     /calculated_mol_wt=20589
     CDS             1..183
                     /gene="LOC121203565"
                     /coded_by="XM_041086095.1:461..1012"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqklf saqalpfsda lkllsytkdw tsnpdkqfrr
      181 gyk
//
LOCUS       XP_040942030             183 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 3 homolog isoform X10 [Gossypium
            hirsutum].
ACCESSION   XP_040942030
VERSION     XP_040942030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086096.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..183
                     /product="WD repeat-containing protein 3 homolog isoform
                     X10"
                     /calculated_mol_wt=20589
     CDS             1..183
                     /gene="LOC121203565"
                     /coded_by="XM_041086096.1:603..1154"
                     /db_xref="GeneID:121203565"
ORIGIN      
        1 mqmfgalqsa tvvtlllqdl mtgpfavgiv lrslfllrkk krrleeifea didntfenkh
       61 ipnsrggscc isreekletl tatdsiidal dvaevelkri aehedekarg kvaefqpnmi
      121 mlglspsdyv lralsyistn dleqtlqklf saqalpfsda lkllsytkdw tsnpdkqfrr
      181 gyk
//
LOCUS       XP_040942031             377 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member 7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942031
VERSION     XP_040942031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086097.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="dehydrogenase/reductase SDR family member 7
                     isoform X1"
                     /calculated_mol_wt=41156
     Region          42..346
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(51,53..54,56,75..77,133..135,184..186,199,203,
                     229..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..377
                     /gene="LOC121212730"
                     /coded_by="XM_041086097.1:151..1284"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrselcqk gikvtvvcpg pietsngsga
      241 ttsgtkvsse vrpffstvkl fgsqnvfqlt anllssltpi kvsfcpffaa vmlsqevskk
      301 rvsaercvel tiiaashglk evwisyqpvl avmylvqymp tigywlmdkv ggrrvevaaq
      361 kgntyslgll fgkkkaa
//
LOCUS       XP_040942032             356 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized oxidoreductase YqjQ isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942032
VERSION     XP_040942032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086098.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..356
                     /product="uncharacterized oxidoreductase YqjQ isoform X2"
                     /calculated_mol_wt=38646
     Region          42..330
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(51,53..54,56,75..77,133..135,184..186,199,203,
                     229..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..356
                     /gene="LOC121212730"
                     /coded_by="XM_041086098.1:114..1184"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrselcqk gikvtvvcpg pietsngsga
      241 ttsgtkvsse vrpffstvkl fgsqnvfqlt anllssltpi kvsfcpffaa vmlsqevskk
      301 rvsaercvel tiiaashglk evwisyqgil glffqshllg ttpsqggepp arqpnc
//
LOCUS       XP_040942033             338 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized oxidoreductase YqjQ isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942033
VERSION     XP_040942033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086099.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..338
                     /product="uncharacterized oxidoreductase YqjQ isoform X3"
                     /calculated_mol_wt=36748
     Region          42..332
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(51,53..54,56,75..77,133..135,184..186,199,203,
                     229..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..338
                     /gene="LOC121212730"
                     /coded_by="XM_041086099.1:113..1129"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrselcqk gikvtvvcpg pietsngsga
      241 ttsgtkvsse vrpffstvkl fgsqnvfqlt anllssltpi kvsfcpffaa vmlsqevskk
      301 rvsaercvel tiiaashglk evwisyqgge pparqpnc
//
LOCUS       XP_040942034             328 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member 7 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942034
VERSION     XP_040942034.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086100.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..328
                     /product="dehydrogenase/reductase SDR family member 7
                     isoform X4"
                     /calculated_mol_wt=35748
     Region          42..297
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(51,53..54,56,75..77,133..135,184..186,199,203,
                     229..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..328
                     /gene="LOC121212730"
                     /coded_by="XM_041086100.1:151..1137"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrselcqk gikvtvvcpg pietsngsga
      241 ttsgtkvsse krvsaercve ltiiaashgl kevwisyqpv lavmylvqym ptigywlmdk
      301 vggrrvevaa qkgntyslgl lfgkkkaa
//
LOCUS       XP_040942036             294 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member 7 isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040942036
VERSION     XP_040942036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086102.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..294
                     /product="dehydrogenase/reductase SDR family member 7
                     isoform X5"
                     /calculated_mol_wt=32429
     Region          42..263
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..294
                     /gene="LOC121212730"
                     /coded_by="XM_041086102.1:155..1039"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrsekrvs aercveltii aashglkevw
      241 isyqpvlavm ylvqymptig ywlmdkvggr rvevaaqkgn tyslgllfgk kkaa
//
LOCUS       XP_040942037             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member 7 isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040942037
VERSION     XP_040942037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086103.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..289
                     /product="dehydrogenase/reductase SDR family member 7
                     isoform X6"
                     /calculated_mol_wt=31339
     Region          42..283
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(51,53..54,56,75..77,133..135,184..186,199,203,
                     229..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..289
                     /gene="LOC121212730"
                     /coded_by="XM_041086103.1:106..975"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrselcqk gikvtvvcpg pietsngsga
      241 ttsgtkvsse krvsaercve ltiiaashgl kevwisyqgg epparqpnc
//
LOCUS       XP_040942038             266 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member 7 isoform X7 [Gossypium
            hirsutum].
ACCESSION   XP_040942038
VERSION     XP_040942038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086104.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..266
                     /product="dehydrogenase/reductase SDR family member 7
                     isoform X7"
                     /calculated_mol_wt=29259
     Region          42..>216
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(158,186,199,203)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..266
                     /gene="LOC121212730"
                     /coded_by="XM_041086104.1:103..903"
                     /db_xref="GeneID:121212730"
ORIGIN      
        1 mltlffislf lilvlsallf kfaisdgdft llsrrhvkre eiedkvvwit gasrgigeil
       61 akqlaslgak lilsarnete lervrkqltg kyapeqvkil pldltsgeat lkeavdkaes
      121 ffpgvgvdym ihnaayerpk ttaldvtees lkatfnvnvf gticltrllt pfmlrrgrgh
      181 fvvmssaagk tpapgqavys askyalngyf hslrsepvla vmylvqympt igywlmdkvg
      241 grrvevaaqk gntyslgllf gkkkaa
//
LOCUS       XP_040942039             603 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942039
VERSION     XP_040942039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086105.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..603
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=65496
     CDS             1..603
                     /gene="LOC107893887"
                     /coded_by="XM_041086105.1:255..2066"
                     /db_xref="GeneID:107893887"
ORIGIN      
        1 mvplllrqkd lllcslivpr ktspkgeihk igqkkkgkhk kkqfcdvgst esevysqytr
       61 atsaseicdn ndidccivvs gatspevsps dgllnvidfa essngavtss gspnistsdv
      121 devditgsvv ptqvqkfpre hhlnnceigs edqqlswcqg aierkhlshm gpleglhekd
      181 fsdmhnslal dsvsvgsnse dstsaghivk pfndniheis qselpgsstk edsyhqkslc
      241 stvetheymg eskhglacss lggrmvasgk rgkkfkcipg tpstckpgtm gslhgrmite
      301 nshsvwqrvq knpvekccse lkkmgpicse fsvslkdapv lkrnpnatnv tnlsitdgkr
      361 klksmvprkf krkvtpaskq ennsfsrkec hpikvdcprl gtmktesvnn fqagpsstep
      421 cdtvcgtglg lnnlcvdnqd slpqksfvpl dqlnlleeqn pvhlphlmvn giaqiekgis
      481 laengkqsht lgsvmqkwip irikdlglkt ssksanlsle hangpdaedw tskntfegni
      541 tsfsenlsss enagtlcrtg kdpghgisfl engnnikklr nldaclnene nkhsgadyfi
      601 det
//
LOCUS       XP_040942040             599 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942040
VERSION     XP_040942040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086106.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..599
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=65436
     CDS             1..599
                     /gene="LOC107893887"
                     /coded_by="XM_041086106.1:561..2360"
                     /db_xref="GeneID:107893887"
ORIGIN      
        1 mcaiatfptl esdgqwrifa lplqcfdhtn hlrsgnqvnm ndlhlissss vnsfmvdrwk
       61 tqkgpqpavt ypakpfrgrs fsgsnvqhqf cnktfsessn gavtssgspn istsdvdevd
      121 itgsvvptqv qkfprehhln nceigsedqq lswcqgaier khlshmgple glhekdfsdm
      181 hnslaldsvs vgsnsedsts aghivkpfnd niheisqsel pgsstkedsy hqkslcstve
      241 theymgeskh glacsslggr mvasgkrgkk fkcipgtpst ckpgtmgslh grmitenshs
      301 vwqrvqknpv ekccselkkm gpicsefsvs lkdapvlkrn pnatnvtnls itdgkrklks
      361 mvprkfkrkv tpaskqenns fsrkechpik vdcprlgtmk tesvnnfqag psstepcdtv
      421 cgtglglnnl cvdnqdslpq ksfvpldqln lleeqnpvhl phlmvngiaq iekgislaen
      481 gkqshtlgsv mqkwipirik dlglktssks anlslehang pdaedwtskn tfegnitsfs
      541 enlsssenag tlcrtgkdpg hgisflengn nikklrnlda clnenenkhs gadyfidet
//
LOCUS       XP_040942041             599 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942041
VERSION     XP_040942041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086107.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..599
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=65436
     CDS             1..599
                     /gene="LOC107893887"
                     /coded_by="XM_041086107.1:595..2394"
                     /db_xref="GeneID:107893887"
ORIGIN      
        1 mcaiatfptl esdgqwrifa lplqcfdhtn hlrsgnqvnm ndlhlissss vnsfmvdrwk
       61 tqkgpqpavt ypakpfrgrs fsgsnvqhqf cnktfsessn gavtssgspn istsdvdevd
      121 itgsvvptqv qkfprehhln nceigsedqq lswcqgaier khlshmgple glhekdfsdm
      181 hnslaldsvs vgsnsedsts aghivkpfnd niheisqsel pgsstkedsy hqkslcstve
      241 theymgeskh glacsslggr mvasgkrgkk fkcipgtpst ckpgtmgslh grmitenshs
      301 vwqrvqknpv ekccselkkm gpicsefsvs lkdapvlkrn pnatnvtnls itdgkrklks
      361 mvprkfkrkv tpaskqenns fsrkechpik vdcprlgtmk tesvnnfqag psstepcdtv
      421 cgtglglnnl cvdnqdslpq ksfvpldqln lleeqnpvhl phlmvngiaq iekgislaen
      481 gkqshtlgsv mqkwipirik dlglktssks anlslehang pdaedwtskn tfegnitsfs
      541 enlsssenag tlcrtgkdpg hgisflengn nikklrnlda clnenenkhs gadyfidet
//
LOCUS       XP_040942042             560 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942042
VERSION     XP_040942042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086108.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..560
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=61021
     CDS             1..560
                     /gene="LOC107893887"
                     /coded_by="XM_041086108.1:608..2290"
                     /db_xref="GeneID:107893887"
ORIGIN      
        1 mndlhlisss svnsfmvdrw ktqkgpqpav typakpfrgr sfsgsnvqhq fcnktfsess
       61 ngavtssgsp nistsdvdev ditgsvvptq vqkfprehhl nnceigsedq qlswcqgaie
      121 rkhlshmgpl eglhekdfsd mhnslaldsv svgsnsedst saghivkpfn dniheisqse
      181 lpgsstkeds yhqkslcstv etheymgesk hglacsslgg rmvasgkrgk kfkcipgtps
      241 tckpgtmgsl hgrmitensh svwqrvqknp vekccselkk mgpicsefsv slkdapvlkr
      301 npnatnvtnl sitdgkrklk smvprkfkrk vtpaskqenn sfsrkechpi kvdcprlgtm
      361 ktesvnnfqa gpsstepcdt vcgtglglnn lcvdnqdslp qksfvpldql nlleeqnpvh
      421 lphlmvngia qiekgislae ngkqshtlgs vmqkwipiri kdlglktssk sanlslehan
      481 gpdaedwtsk ntfegnitsf senlsssena gtlcrtgkdp ghgisfleng nnikklrnld
      541 aclnenenkh sgadyfidet
//
LOCUS       XP_040942043             560 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942043
VERSION     XP_040942043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086109.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..560
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=61021
     CDS             1..560
                     /gene="LOC107893887"
                     /coded_by="XM_041086109.1:481..2163"
                     /db_xref="GeneID:107893887"
ORIGIN      
        1 mndlhlisss svnsfmvdrw ktqkgpqpav typakpfrgr sfsgsnvqhq fcnktfsess
       61 ngavtssgsp nistsdvdev ditgsvvptq vqkfprehhl nnceigsedq qlswcqgaie
      121 rkhlshmgpl eglhekdfsd mhnslaldsv svgsnsedst saghivkpfn dniheisqse
      181 lpgsstkeds yhqkslcstv etheymgesk hglacsslgg rmvasgkrgk kfkcipgtps
      241 tckpgtmgsl hgrmitensh svwqrvqknp vekccselkk mgpicsefsv slkdapvlkr
      301 npnatnvtnl sitdgkrklk smvprkfkrk vtpaskqenn sfsrkechpi kvdcprlgtm
      361 ktesvnnfqa gpsstepcdt vcgtglglnn lcvdnqdslp qksfvpldql nlleeqnpvh
      421 lphlmvngia qiekgislae ngkqshtlgs vmqkwipiri kdlglktssk sanlslehan
      481 gpdaedwtsk ntfegnitsf senlsssena gtlcrtgkdp ghgisfleng nnikklrnld
      541 aclnenenkh sgadyfidet
//
LOCUS       XP_016674516             377 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674516
VERSION     XP_016674516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..377
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42452
     Region          27..368
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..377
                     /gene="LOC107893888"
                     /coded_by="XM_016819027.2:1..1134"
                     /db_xref="GeneID:107893888"
ORIGIN      
        1 makalddvyk ahmaseavqm atgcpiaefe rllhfcspvi chsyssvgcq tclldqvpsa
       61 llcrhetpni plgclwqwye khgrygleir aedyknpkrl gidqfafrah fipylsavql
      121 frnskshstq nntrisspgv svtsdissts rnstncgsip ifsavvpqpr taepssqlqv
      181 ddvfrsepsp vspedmlrvk svdisqsdcl elafkyfese qpqqrlalye riqdlvrdda
      241 spqckiygdp vylnsinihd lhpqswysva wypiykipdg nfraafltyh slgllvrrrs
      301 kfdypsvdas ivspvvglqs ynaqgecwfq prhftindic enqglspswi lkerlrtlee
      361 taslmaravv tkgnkts
//
LOCUS       XP_016674517             270 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674517
VERSION     XP_016674517.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819028.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..270
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30436
     Region          44..100
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(46,49,65,67,70,73,97,100)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438249"
     CDS             1..270
                     /gene="LOC107893889"
                     /coded_by="XM_016819028.2:243..1055"
                     /db_xref="GeneID:107893889"
ORIGIN      
        1 mwnfvvkaft gasgsktgsl kpsqvssecl dddtslhnrg eerlecpicw effnvvenip
       61 yvlwcghtlc kncvlglqra vlkyptlpih lpffvtcpwc nlfslrlvyk gnvkfpskny
      121 fllwmiesmn gdrsksnssi hgghppacst nritdggvql rhintrraqc tmhclensas
      181 srsqgrliid yfsaerlhls lrkslvfllh ltvkfplivi fllivlyaip asaavfalyi
      241 litvvfavps flilyfafps ldwlvreiis
//
LOCUS       XP_016674518             270 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674518
VERSION     XP_016674518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..270
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30436
     Region          44..100
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(46,49,65,67,70,73,97,100)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438249"
     CDS             1..270
                     /gene="LOC107893889"
                     /coded_by="XM_016819029.2:214..1026"
                     /db_xref="GeneID:107893889"
ORIGIN      
        1 mwnfvvkaft gasgsktgsl kpsqvssecl dddtslhnrg eerlecpicw effnvvenip
       61 yvlwcghtlc kncvlglqra vlkyptlpih lpffvtcpwc nlfslrlvyk gnvkfpskny
      121 fllwmiesmn gdrsksnssi hgghppacst nritdggvql rhintrraqc tmhclensas
      181 srsqgrliid yfsaerlhls lrkslvfllh ltvkfplivi fllivlyaip asaavfalyi
      241 litvvfavps flilyfafps ldwlvreiis
//
LOCUS       XP_016687150             224 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016687150
VERSION     XP_016687150.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831661.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..224
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25419
     Region          8..81
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(16,18,43,56..57,69..70)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(21,28,75)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(65..66,69,75,79)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          91..217
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(92,94,98,106)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(98,105,158..159,162,204)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(105,109..110,113..114,116..117,163,166,210,213,217)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..224
                     /gene="LOC107905086"
                     /coded_by="XM_016831661.2:241..915"
                     /db_xref="GeneID:107905086"
ORIGIN      
        1 magaaedmkv lgtkqsmfrq rvvwalklkg veyefieedl vhksslllal npvhkkvpvl
       61 vhdgkpiaes kiileyidet wkerpllped preranarfw aafiddklme askkafvstg
      121 ddrakamest meglklleqe lqgkkyfsgd dgigyldiva gwvaywfqfi eeiggfqvme
      181 stkfpcldaw iknflqvpsv eqslpspdel rnvfgairma mqmk
//
LOCUS       XP_016674519             419 aa            linear   PLN 06-AUG-2024
DEFINITION  xylulose 5-phosphate/phosphate translocator, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016674519
VERSION     XP_016674519.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674519.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="xylulose 5-phosphate/phosphate translocator,
                     chloroplastic"
                     /calculated_mol_wt=46114
     Region          115..405
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; pfam03151"
                     /db_xref="CDD:308657"
     CDS             1..419
                     /gene="LOC107893890"
                     /coded_by="XM_016819030.2:319..1578"
                     /db_xref="GeneID:107893890"
ORIGIN      
        1 mftlnlipst pitfsksthq yfpikriqsp knlaespvff tkstplnfnk ihacpfgkiq
       61 alstktthlg kilenpsrka gshvpkaaas sesnpegeae sveaaaaaks kakalqlalv
      121 fgfwyfqniv fniynkkaln vfpfpwllas fqlfagsiwm lvlwslklqp cpkitkpfii
      181 allgpaffht ighisacvsf skvavsfthv ikssepvfsv vfssflgdty plkvwlsilp
      241 ivlgcslaai tevsfnfqgl wgalisnvgf vlrniyskrs lqnfkevngl nlygwisiis
      301 lfylfpvavl vegsqwvqgy qqaiqtvgka stfyiwvlls gifyhlynqs syqaldeisp
      361 ltfsvgntmk rivvivstvl vfrnpvrpln algsgiailg tflysqatak kvsapekks
//
LOCUS       XP_040942045             307 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942045
VERSION     XP_040942045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086111.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..307
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=34712
     Region          48..>136
                     /region_name="TMEM33_Pom33"
                     /note="Transmembrane protein 33/Nucleoporin POM33;
                     pfam03661"
                     /db_xref="CDD:461009"
     CDS             1..307
                     /gene="LOC107894577"
                     /coded_by="XM_041086111.1:519..1442"
                     /db_xref="GeneID:107894577"
ORIGIN      
        1 mnkwcitqdk wingvigear arnagstart sgpsagsgsn ttslrwdlht iqfsvnawvf
       61 ivavlaifpl vpkslskray rlsfmgtacs svyslyalyg rprawtlqvv qvyfqsviat
      121 khfiyfiycl tfvtshlcln falisilcrs leriakflrh nfsrsalyrk yledhyvwve
      181 sntttlsils syaeiglggl llvslflpva mqhctnfyvl gfgfdfkpyv hpiynaimsl
      241 ltnqdqdqvh tlafysgvld slaielkasn dfsklyagia ilwlhlslnq pcvvycffif
      301 frsfsfd
//
LOCUS       XP_040942046             279 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942046
VERSION     XP_040942046.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086112.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..279
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=31471
     Region          48..>136
                     /region_name="TMEM33_Pom33"
                     /note="Transmembrane protein 33/Nucleoporin POM33;
                     pfam03661"
                     /db_xref="CDD:461009"
     CDS             1..279
                     /gene="LOC107894577"
                     /coded_by="XM_041086112.1:518..1357"
                     /db_xref="GeneID:107894577"
ORIGIN      
        1 mnkwcitqdk wingvigear arnagstart sgpsagsgsn ttslrwdlht iqfsvnawvf
       61 ivavlaifpl vpkslskray rlsfmgtacs svyslyalyg rprawtlqvv qvyfqsviat
      121 khfiyfiycl tfvtshlcln falisilcrs leriakflrh nfsrsalyrk yledhyvwve
      181 sntttlsils syaeiglggl llvslflpva mqhctnfyvl vhtlafysgv ldslaielka
      241 sndfsklyag iailwlhlsl nqpcvvycff iffrsfsfd
//
LOCUS       XP_040942047             277 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942047
VERSION     XP_040942047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086113.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..277
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=31440
     CDS             1..277
                     /gene="LOC107894577"
                     /coded_by="XM_041086113.1:518..1351"
                     /db_xref="GeneID:107894577"
ORIGIN      
        1 mnkwcitqdk wingvigear arnagstart sgpsagsgsn ttslrwdlht iqfsvnawvf
       61 ivavlaifpl vpkslskray rlsfmgtacs svyslyalyg rprawtlqvv qvyfqsviat
      121 khfiyfiycl tfvtshlcln falisilcrs leriakflrh nfsrsalyrk yledhyvwve
      181 sntttlsils syaeiglggl llvslflpva mqhctnfyvl llklmyhapv sasyhqsvwa
      241 kigrtinpli lryapfliis cilwlsipvf wilwqln
//
LOCUS       XP_040942048             276 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942048
VERSION     XP_040942048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086114.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..276
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=31099
     CDS             1..276
                     /gene="LOC107894577"
                     /coded_by="XM_041086114.1:518..1348"
                     /db_xref="GeneID:107894577"
ORIGIN      
        1 mnkwcitqdk wingvigear arnagstart sgpsagsgsn ttslrwdlht iqfsvnawvf
       61 ivavlaifpl vpkslskray rlsfmgtacs svyslyalyg rprawtlqvv qvyfqsviat
      121 khfiyfiycl tfvtshlcln falisilcrs leriakflrh nfsrsalyrk yledhyvwve
      181 sntttlsils syaeiglggl llvslflpva mqhctnfyvl llklmyhapv sasyhqsvwa
      241 kigrtinpli lryapfliis vlvlilnlms tqsimq
//
LOCUS       XP_016675326             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675326
VERSION     XP_016675326.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819837.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675326.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=25505
     CDS             1..223
                     /gene="LOC107894577"
                     /coded_by="XM_016819837.2:707..1378"
                     /db_xref="GeneID:107894577"
ORIGIN      
        1 mgtacssvys lyalygrpra wtlqvvqvyf qsviatkhfi yfiycltfvt shlclnfali
       61 silcrsleri akflrhnfsr salyrkyled hyvwvesntt tlsilssyae iglgglllvs
      121 lflpvamqhc tnfyvlgfgf dfkpyvhpiy naimslltnq dqdqvhtlaf ysgvldslai
      181 elkasndfsk lyagiailwl hlslnqpcvv ycffiffrsf sfd
//
LOCUS       XP_016674225             198 aa            linear   PLN 06-AUG-2024
DEFINITION  photosynthetic NDH subunit of lumenal location 2, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016674225
VERSION     XP_016674225.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818736.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674225.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..198
                     /product="photosynthetic NDH subunit of lumenal location
                     2, chloroplastic"
                     /calculated_mol_wt=22584
     Region          38..197
                     /region_name="PsbQ"
                     /note="Oxygen evolving enhancer protein 3 (PsbQ); cl23783"
                     /db_xref="CDD:420004"
     CDS             1..198
                     /gene="LOC107893679"
                     /coded_by="XM_016818736.2:244..840"
                     /db_xref="GeneID:107893679"
ORIGIN      
        1 mtsftnstff ihvnqkfptp qshhcsrlsl piirasfqpq qnnviisnrr klvttflats
       61 laalglngtp vavaenwgth sflrerffep glspedaaar ikqtaeglhs mrdmldtmsw
      121 ryvmfyirlk qaylsqdlkn amstlpqgrk dlyvktanel vvnmaefdyy vrtpkvyesy
      181 lyyektlksi ddlvallg
//
LOCUS       XP_016675536             313 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB16 [Gossypium hirsutum].
ACCESSION   XP_016675536
VERSION     XP_016675536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="transcription factor MYB16"
                     /calculated_mol_wt=35365
     Region          15..>135
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..313
                     /gene="LOC107894855"
                     /coded_by="XM_016820047.2:89..1030"
                     /db_xref="GeneID:107894855"
ORIGIN      
        1 mgrrlplngh kevglkrgpw taeedqilma yiqqrghgnw ralpekaglk rcgkscrlrw
       61 inylrpdikr gkfnlqeeht iiqlhallgn rwsamaahlp krtdneikny wnthlkkrli
      121 klgvdpmthk prtdaasfps gsnlthmaqw esarleaear lvrgskqvvp npihpknhlt
      181 lnhsqlrprc ldvlqawqgv vagmfafptq dlgsptstlr lpaiglnats ytdcemgfdd
      241 slkyiensnq mkeieetitd gcidewfeds frvgnyesvp mavdgsnccg svfdlvnssp
      301 yglsmlydhn vmk
//
LOCUS       XP_016675537             332 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB106 [Gossypium hirsutum].
ACCESSION   XP_016675537
VERSION     XP_016675537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..332
                     /product="transcription factor MYB106"
                     /calculated_mol_wt=36965
     Region          1..>204
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..332
                     /gene="LOC107894856"
                     /coded_by="XM_016820048.2:176..1174"
                     /db_xref="GeneID:107894856"
ORIGIN      
        1 mgrspccdkv glkkgpwtpe edqkllayie qhghgswral pakaglqrcg kscrlrwiny
       61 lrpdikrgkf slqeeqtiiq lhallgnrws giaahlpkrt dneiknywnt hlkkrlnkmg
      121 idpvtqkpkt nalgsatgnp kdaatlshma qwesarleae arlvreskfv gsssssssss
      181 sssapqhtsn tvmtppatrp qcldvlkawq glvtglftfn nttdnlqspt stlnfventn
      241 tlanglinen smelhemgaw frqdssyrav enmnmedysd mmvwesgdhq qwssmaapae
      301 nlnetsygns ssssssleen rnywnnilnl vs
//
LOCUS       XP_016675549              87 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB16 [Gossypium hirsutum].
ACCESSION   XP_016675549
VERSION     XP_016675549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..87
                     /product="transcription factor MYB16"
                     /calculated_mol_wt=10073
     Region          4..>86
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..87
                     /gene="LOC107894873"
                     /coded_by="XM_016820060.2:150..413"
                     /db_xref="GeneID:107894873"
ORIGIN      
        1 madcrekmgl kkgpwtpded qkllayfeeh glgnwrtlpe kaglqrcgks crlrwinylr
       61 pdlkrgkfsl qeeqtiiqlh aflgnrs
//
LOCUS       XP_016674380             422 aa            linear   PLN 06-AUG-2024
DEFINITION  integrin-linked protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_016674380
VERSION     XP_016674380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818891.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..422
                     /product="integrin-linked protein kinase 1"
                     /calculated_mol_wt=47109
     Region          2..>126
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..67
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(41..42,45..47,49..50,54,57,67,69,71,75..76,79..81,
                     83..84,88,91,100,102,104,108..109,112..114,116..117,121,
                     124)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          69..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          102..126
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          167..419
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(167..171,175,186,188,220,236..239,243,245,284,286,
                     288..289,291,304,307,327..330)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(167..171,175,186,188,220,236..239,243,284,286,
                     288..289,291,304)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(171,243,245,284,286,288,307,327..330)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(303..311,326..330)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..422
                     /gene="LOC107893798"
                     /coded_by="XM_016818891.2:236..1504"
                     /db_xref="GeneID:107893798"
ORIGIN      
        1 mnsgtsdgel aapgssgrls stssadkkke karvsrtsmi lwhahqndag avrklleedr
       61 alvnardyds rtplhvaslh gwidvakcll eygadvnaqd rwkntplada egakkhnmie
      121 llksngglsy gqsgshfepk pvlpplpnkc dwevdpseld fsssniigkg sfgeilkasw
      181 rgtpvavkri lpslsddrlv iqdfrhevnl lvklrhpniv qflgavtdkk plmliteylk
      241 ggdlhqylke kgslsastav sfaldiargm aylhnepnvi ihrdlkprnv llvnssadhl
      301 kvgdfglskl ikvqnchdvy kmtgetgsyr ymapevfkhr kydkkvdvfs familyemle
      361 geppfsnyep yeaakyvaag hrpsfrsksy lpelrdltdn cwaadmnqrp sfldilkrle
      421 km
//
LOCUS       XP_016674381             212 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24delta9 [Gossypium
            hirsutum].
ACCESSION   XP_016674381
VERSION     XP_016674381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818892.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..212
                     /product="transmembrane emp24 domain-containing protein
                     p24delta9"
                     /calculated_mol_wt=24255
     Region          22..207
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..212
                     /gene="LOC107893799"
                     /coded_by="XM_016818892.2:285..923"
                     /db_xref="GeneID:107893799"
ORIGIN      
        1 milrsvlvlv llvgvlfpas qslrfdlqsg qtkciaedik snsmtvgkyh vvkpnedhpl
       61 pdthkltvrv tssygnnfhs aekvengqfa ftateqgdym acfwapehsp pitvtvdfdw
      121 rtgvhtkdwt nvakkgqvda melelknlyd tiqsiheemf ylrereeemq elnkattskm
      181 fwlsfvslfl clsvaglqfw hlktffekkk li
//
LOCUS       XP_040942050             162 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 11 homolog [Gossypium
            hirsutum].
ACCESSION   XP_040942050
VERSION     XP_040942050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086116.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..162
                     /product="26S proteasome non-ATPase regulatory subunit 11
                     homolog"
                     /calculated_mol_wt=18030
     Region          14..128
                     /region_name="RPN6_N"
                     /note="26S proteasome regulatory subunit RPN6 N-terminal
                     domain; pfam18055"
                     /db_xref="CDD:465630"
     CDS             1..162
                     /gene="LOC107893800"
                     /coded_by="XM_041086116.1:1..489"
                     /db_xref="GeneID:107893800"
ORIGIN      
        1 msssylpait nslaraleak tpyeaisily rvlqnpssap davrikeqai tnlsdllrqe
       61 traeelksll aqlrpffali pkaktakivr giiddvakip gtsdlqislc kevvqwtrae
      121 krtflrqrve aklagllien keysealnll sglikevrrl dd
//
LOCUS       XP_040942052             124 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 11 homolog [Gossypium
            hirsutum].
ACCESSION   XP_040942052
VERSION     XP_040942052.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086118.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..124
                     /product="26S proteasome non-ATPase regulatory subunit 11
                     homolog"
                     /calculated_mol_wt=13625
     Region          <1..124
                     /region_name="RPN6"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5159"
                     /db_xref="CDD:227488"
     CDS             1..124
                     /gene="LOC121212731"
                     /coded_by="XM_041086118.1:1..375"
                     /db_xref="GeneID:121212731"
ORIGIN      
        1 mvsqaddvag iisskaglqy vgpeldamka vadaqakrsl klfeialrdf kaqleedpiv
       61 hrhlsslydt lleqnlcrli epfsrveith iaelielpvd hvekklsqmi ldkkfagtld
      121 qgag
//
LOCUS       XP_040942053             715 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein At1g69450 [Gossypium hirsutum].
ACCESSION   XP_040942053
VERSION     XP_040942053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086119.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..715
                     /product="CSC1-like protein At1g69450"
                     /calculated_mol_wt=81674
     Region          4..654
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          355..619
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..715
                     /gene="LOC121212732"
                     /coded_by="XM_041086119.1:287..2434"
                     /db_xref="GeneID:121212732"
ORIGIN      
        1 mlvsalltsv ginsglcvlf ftlysilrkq ptnyevyipr liaegsskrr shfnlerlip
       61 spgwvkrawk lseedllsts gldavvfmrv itfslrvflf agvigifvll pvncsgdqlh
      121 didfadlsnn sldvftisnl ssgskrlwah fsavylvtaf vcyllyyeyk citgkridff
      181 hstkpqphqf tilvrsipvs agssvsesve rffmeyhpst ylshmvvhrs sklqslikda
      241 kklykrithl qsepnqpqyr hvgffrhrvd lvdhygkkle dieenmrler sevslatqev
      301 raafvsfksr ygaavafhmk qsinptewvt elapepndvy wpffsssfmr rwlskivviv
      361 acilltilfl ipvlvvqglt nlnqleiwfp flksiltitf vsqvitgylp slilqlflki
      421 vppimeflss iqgyichsdi eksacnkvlw ftiwniffat vfsgsvlyqv sifldpkhip
      481 aklasavpaq asffiayvvt sgwtstssel friipliwsl iqkpfsccsd eefevpsipy
      541 hrdiprilff gllgityffl aplilpfllv ylclayiiyr nqflnvyapk yetagkfwpi
      601 vhnsmifslv lmqaiaiglf tlkklplast lifplpvltl lfneycrkrf lpnfiaypae
      661 vlikrdredr ndpkmaefyd nlvaayqdpa llpiqfsans dslnsplisa aqvrh
//
LOCUS       XP_040942054             715 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein At1g69450 [Gossypium hirsutum].
ACCESSION   XP_040942054
VERSION     XP_040942054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086120.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..715
                     /product="CSC1-like protein At1g69450"
                     /calculated_mol_wt=81674
     Region          4..654
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          355..619
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..715
                     /gene="LOC121212732"
                     /coded_by="XM_041086120.1:191..2338"
                     /db_xref="GeneID:121212732"
ORIGIN      
        1 mlvsalltsv ginsglcvlf ftlysilrkq ptnyevyipr liaegsskrr shfnlerlip
       61 spgwvkrawk lseedllsts gldavvfmrv itfslrvflf agvigifvll pvncsgdqlh
      121 didfadlsnn sldvftisnl ssgskrlwah fsavylvtaf vcyllyyeyk citgkridff
      181 hstkpqphqf tilvrsipvs agssvsesve rffmeyhpst ylshmvvhrs sklqslikda
      241 kklykrithl qsepnqpqyr hvgffrhrvd lvdhygkkle dieenmrler sevslatqev
      301 raafvsfksr ygaavafhmk qsinptewvt elapepndvy wpffsssfmr rwlskivviv
      361 acilltilfl ipvlvvqglt nlnqleiwfp flksiltitf vsqvitgylp slilqlflki
      421 vppimeflss iqgyichsdi eksacnkvlw ftiwniffat vfsgsvlyqv sifldpkhip
      481 aklasavpaq asffiayvvt sgwtstssel friipliwsl iqkpfsccsd eefevpsipy
      541 hrdiprilff gllgityffl aplilpfllv ylclayiiyr nqflnvyapk yetagkfwpi
      601 vhnsmifslv lmqaiaiglf tlkklplast lifplpvltl lfneycrkrf lpnfiaypae
      661 vlikrdredr ndpkmaefyd nlvaayqdpa llpiqfsans dslnsplisa aqvrh
//
LOCUS       XP_040942055            1096 aa            linear   PLN 06-AUG-2024
DEFINITION  protein argonaute 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942055
VERSION     XP_040942055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086121.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1096
                     /product="protein argonaute 7 isoform X1"
                     /calculated_mol_wt=124655
     Region          210..1096
                     /region_name="PLN03202"
                     /note="protein argonaute; Provisional"
                     /db_xref="CDD:215631"
     Region          615..1056
                     /region_name="Piwi_ago-like"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; cd04657"
                     /db_xref="CDD:240015"
     Site            order(759,763,775..778,781,789,792,796,800)
                     /site_type="active"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     Site            order(832,834,905,1046)
                     /site_type="active"
                     /db_xref="CDD:240015"
     CDS             1..1096
                     /gene="LOC121212733"
                     /coded_by="XM_041086121.1:43..3333"
                     /db_xref="GeneID:121212733"
ORIGIN      
        1 mlfdtelykc qigfypffal llftffsnpn pwlapflsln fittiiiiii iiknlknpls
       61 lslslslcef qsvaffcvaf ffssfinqam ekseehdgsk ecsgktrafk ginnsphkhh
      121 yyhhhhpwlq ysghygffnq nqfqsysyyp sllplpppip lqlalppplp qnhtfqpkth
      181 lqqlsisntk fpvpsmtpaa qeglqwrksl pskasdgikm rnatkealva arrpdsggve
      241 gpvisllanh flvkfdpslk vyhynveisp npskevarmi kqklvesnsg llcgahpayd
      301 grknfyspve fqngkleffv slpiptantg spfgewngfq qkqnqlkvfr iniravsnfd
      361 gkdlssylsn esddwiplpq dylhaldvvl respmekcic vgrsfyssst ggtkeiggga
      421 igwrgffqsl rptqqglaln vdssitvfhe sigvipylqk ridflrdltq rktrslsdde
      481 rkevekalrn irvfvchret vqryrvyglt eeatenlyfa drdgknlkli gyfkdhynyn
      541 iqfrnlpclq isrskpcylp melcmicegq kflgklsddq tarilkmgcq rpkerkamid
      601 givrgpagpt sgnqaeefkl hvskemsrln grilqppklk lgdgghvrdi tpsrrdrqwn
      661 llnshvfqgt rierwallsf ggtqeqksnl pkfinqlsqr ceqlgiflsk stvvspqfep
      721 tqvlnnvtll esklkkihra asnnlqllic imekkhkgya dlkriaetsv gvvsqcclyp
      781 nlgklssqfl anlalkinak vggstvalyn slpsqiprlf rldepvifig advthphpld
      841 dsspsvagvv gsmnwpaank yvsrmrsqth rqeiiqdlaa mveellddfy qevnklpkri
      901 iffrdgvset qfykvlkeel qavkeacarf pgykppitfa vvqkrhhtwl fpfeinpssn
      961 qnqhfdenip pgtvvdtvit hprefdfylc shwgvkgtsr pthyhvlwde nrftsdelqk
     1021 lvynlcytfa rctkpvslvp payyahlaay rgrlylerse svaftrssni isrvtppktt
     1081 plpklsenvk klmfyc
//
LOCUS       XP_040942056            1095 aa            linear   PLN 06-AUG-2024
DEFINITION  protein argonaute 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942056
VERSION     XP_040942056.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086122.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1095
                     /product="protein argonaute 7 isoform X2"
                     /calculated_mol_wt=124584
     Region          192..1095
                     /region_name="PLN03202"
                     /note="protein argonaute; Provisional"
                     /db_xref="CDD:215631"
     Region          614..1055
                     /region_name="Piwi_ago-like"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; cd04657"
                     /db_xref="CDD:240015"
     Site            order(758,762,774..777,780,788,791,795,799)
                     /site_type="active"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     Site            order(831,833,904,1045)
                     /site_type="active"
                     /db_xref="CDD:240015"
     CDS             1..1095
                     /gene="LOC121212733"
                     /coded_by="XM_041086122.1:87..3374"
                     /db_xref="GeneID:121212733"
ORIGIN      
        1 mlfdtelykc qigfypffal llftffsnpn pwlapflsln fittiiiiii iiknlknpls
       61 lslslslcef qsvaffcvaf ffssfinqam ekseehdgsk ecsgktrafk ginnsphkhh
      121 yyhhhhpwlq ysghygffnq nqfqsysyyp sllplpppip lqlalppplp qnhtfqpkth
      181 lqqlsisntk fpvpsmtpaq eglqwrkslp skasdgikmr natkealvaa rrpdsggveg
      241 pvisllanhf lvkfdpslkv yhynveispn pskevarmik qklvesnsgl lcgahpaydg
      301 rknfyspvef qngkleffvs lpiptantgs pfgewngfqq kqnqlkvfri niravsnfdg
      361 kdlssylsne sddwiplpqd ylhaldvvlr espmekcicv grsfyssstg gtkeigggai
      421 gwrgffqslr ptqqglalnv dssitvfhes igvipylqkr idflrdltqr ktrslsdder
      481 kevekalrni rvfvchretv qryrvyglte eatenlyfad rdgknlklig yfkdhynyni
      541 qfrnlpclqi srskpcylpm elcmicegqk flgklsddqt arilkmgcqr pkerkamidg
      601 ivrgpagpts gnqaeefklh vskemsrlng rilqppklkl gdgghvrdit psrrdrqwnl
      661 lnshvfqgtr ierwallsfg gtqeqksnlp kfinqlsqrc eqlgiflsks tvvspqfept
      721 qvlnnvtlle sklkkihraa snnlqllici mekkhkgyad lkriaetsvg vvsqcclypn
      781 lgklssqfla nlalkinakv ggstvalyns lpsqiprlfr ldepvifiga dvthphpldd
      841 sspsvagvvg smnwpaanky vsrmrsqthr qeiiqdlaam veellddfyq evnklpkrii
      901 ffrdgvsetq fykvlkeelq avkeacarfp gykppitfav vqkrhhtwlf pfeinpssnq
      961 nqhfdenipp gtvvdtvith prefdfylcs hwgvkgtsrp thyhvlwden rftsdelqkl
     1021 vynlcytfar ctkpvslvpp ayyahlaayr grlylerses vaftrssnii srvtppkttp
     1081 lpklsenvkk lmfyc
//
LOCUS       XP_040942057             322 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha,
            chloroplastic-like [Gossypium hirsutum].
ACCESSION   XP_040942057
VERSION     XP_040942057.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086123.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..322
                     /product="acetyl-coenzyme A carboxylase carboxyl
                     transferase subunit alpha, chloroplastic-like"
                     /calculated_mol_wt=35503
     Region          <1..>322
                     /region_name="PLN03229"
                     /note="acetyl-coenzyme A carboxylase carboxyl transferase
                     subunit alpha; Provisional"
                     /db_xref="CDD:178768"
     CDS             1..322
                     /gene="LOC107942272"
                     /coded_by="XM_041086123.1:192..1160"
                     /db_xref="GeneID:107942272"
ORIGIN      
        1 mfglkvpivs ivigeggsgg alavgcankl lmlenavfyv aspeacaail wksakaspka
       61 aeklritape lcklqicdgi ipeppggaha gatwtsqqik aainetmdel ttidteellk
      121 hrmhkfrklg gfqegvpidp kkevnmkkke qtvprsskae legeieklkq qilkakesst
      181 kplevalknm ieklkeeayh eyseairamg lkdrlemlre evskvnskdr lmnpvlmdki
      241 eklkhelnqs lsaapnytil kykldmlkev stakslskaa tmkqevnkkf seimgrheik
      301 dklealeaev qssgsssfid ld
//
LOCUS       XP_016674929             245 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674929
VERSION     XP_016674929.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819440.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="acetyl-coenzyme A carboxylase carboxyl
                     transferase subunit alpha, chloroplastic isoform X1"
                     /calculated_mol_wt=27927
     Region          1..>240
                     /region_name="PLN03229"
                     /note="acetyl-coenzyme A carboxylase carboxyl transferase
                     subunit alpha; Provisional"
                     /db_xref="CDD:178768"
     CDS             1..245
                     /gene="LOC107894205"
                     /coded_by="XM_016819440.2:320..1057"
                     /db_xref="GeneID:107894205"
ORIGIN      
        1 masisyspaa fdetsasdll rssssgvtgi plktlgkvrf vvkrrdviva akmrkmkkhe
       61 ypwpadphpn vkggvlthls hfkplkekqk pvtldfekpl vdlekkivdv rkmanetgld
      121 fsdqiislen kyqqalkely lhitpiqrvn iarhpnrptf ldhvfnmtdk fvelhgdrag
      181 yddpaivtgi gtidgrrymf igqqkgrntk eniqrnfgmp tphgyrkalr mmyyadhhrf
      241 cnnlv
//
LOCUS       XP_040942058             245 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942058
VERSION     XP_040942058.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086124.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="acetyl-coenzyme A carboxylase carboxyl
                     transferase subunit alpha, chloroplastic isoform X1"
                     /calculated_mol_wt=27927
     Region          1..>240
                     /region_name="PLN03229"
                     /note="acetyl-coenzyme A carboxylase carboxyl transferase
                     subunit alpha; Provisional"
                     /db_xref="CDD:178768"
     CDS             1..245
                     /gene="LOC107894205"
                     /coded_by="XM_041086124.1:320..1057"
                     /db_xref="GeneID:107894205"
ORIGIN      
        1 masisyspaa fdetsasdll rssssgvtgi plktlgkvrf vvkrrdviva akmrkmkkhe
       61 ypwpadphpn vkggvlthls hfkplkekqk pvtldfekpl vdlekkivdv rkmanetgld
      121 fsdqiislen kyqqalkely lhitpiqrvn iarhpnrptf ldhvfnmtdk fvelhgdrag
      181 yddpaivtgi gtidgrrymf igqqkgrntk eniqrnfgmp tphgyrkalr mmyyadhhrf
      241 cnnlv
//
LOCUS       XP_016674930             245 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha,
            chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674930
VERSION     XP_016674930.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819441.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..245
                     /product="acetyl-coenzyme A carboxylase carboxyl
                     transferase subunit alpha, chloroplastic isoform X2"
                     /calculated_mol_wt=27614
     Region          1..>224
                     /region_name="PLN03229"
                     /note="acetyl-coenzyme A carboxylase carboxyl transferase
                     subunit alpha; Provisional"
                     /db_xref="CDD:178768"
     CDS             1..245
                     /gene="LOC107894205"
                     /coded_by="XM_016819441.2:320..1057"
                     /db_xref="GeneID:107894205"
ORIGIN      
        1 masisyspaa fdetsasdll rssssgvtgi plktlgkvrf vvkrrdviva akmrkmkkhe
       61 ypwpadphpn vkggvlthls hfkplkekqk pvtldfekpl vdlekkivdv rkmanetgld
      121 fsdqiislen kyqqalkely lhitpiqrvn iarhpnrptf ldhvfnmtdk fvelhgdrag
      181 yddpaivtgi gtidgrrymf igqqkgrntk eniqrnfgmp tphgkhlqlq egsthdvlcr
      241 spqvl
//
LOCUS       XP_040942059             233 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha,
            chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942059
VERSION     XP_040942059.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086125.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..233
                     /product="acetyl-coenzyme A carboxylase carboxyl
                     transferase subunit alpha, chloroplastic isoform X3"
                     /calculated_mol_wt=26275
     Region          1..>224
                     /region_name="PLN03229"
                     /note="acetyl-coenzyme A carboxylase carboxyl transferase
                     subunit alpha; Provisional"
                     /db_xref="CDD:178768"
     CDS             1..233
                     /gene="LOC107894205"
                     /coded_by="XM_041086125.1:320..1021"
                     /db_xref="GeneID:107894205"
ORIGIN      
        1 masisyspaa fdetsasdll rssssgvtgi plktlgkvrf vvkrrdviva akmrkmkkhe
       61 ypwpadphpn vkggvlthls hfkplkekqk pvtldfekpl vdlekkivdv rkmanetgld
      121 fsdqiislen kyqqalkely lhitpiqrvn iarhpnrptf ldhvfnmtdk fvelhgdrag
      181 yddpaivtgi gtidgrrymf igqqkgrntk eniqrnfgmp tphgskskri kfg
//
LOCUS       XP_016674931             189 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha,
            chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016674931
VERSION     XP_016674931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819442.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..189
                     /product="acetyl-coenzyme A carboxylase carboxyl
                     transferase subunit alpha, chloroplastic isoform X4"
                     /calculated_mol_wt=21242
     Region          1..>189
                     /region_name="PLN03229"
                     /note="acetyl-coenzyme A carboxylase carboxyl transferase
                     subunit alpha; Provisional"
                     /db_xref="CDD:178768"
     CDS             1..189
                     /gene="LOC107894205"
                     /coded_by="XM_016819442.2:319..888"
                     /db_xref="GeneID:107894205"
ORIGIN      
        1 masisyspaa fdetsasdll rssssgvtgi plktlgkvrf vvkrrdviva akmrkmkkhe
       61 ypwpadphpn vkggvlthls hfkplkekqk pvtldfekpl vdlekkivdv rkmanetgld
      121 fsdqiislen kyqqalkely lhitpiqrvn iarhpnrptf ldhvfnmtdk fvelhgdrag
      181 yddpaivtg
//
LOCUS       XP_016723260             455 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SSUH2 homolog, partial [Gossypium hirsutum].
ACCESSION   XP_016723260
VERSION     XP_016723260.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867771.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016723260.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         <1..455
                     /product="protein SSUH2 homolog"
     Region          <187..>305
                     /region_name="PRK14298"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:184612"
     CDS             1..455
                     /gene="LOC107935206"
                     /coded_by="XM_016867771.2:<1..1368"
                     /db_xref="GeneID:107935206"
ORIGIN      
        1 fyvlqlpskk fcpinhqlsa plqhcncqrk smeqpllsek rseteeserl rsyqyvgrtg
       61 svipttslag aevsikeirs atsfsghypp sihapfinsp eplpneeail hqgpyttdyg
      121 tysndfrrql ldeveirell idhvghrccw gsrpartwki havedcnvyv gtletfleer
      181 elvsetepyh ggnidgkdkg pelglwdldl rsqfpalyvp yketrvkilr setvekcsgc
      241 agrgdiacpt cnadqepgfy kqnqmsrcpa cygrgliahr dgsdtictnc dgkgkipcat
      301 cgsrgllqck tchgsgslst lkiaiikwkt lstrkvsvts gaalvpdeif hrakgvqlcn
      361 tqasqcspaf fadsfflnqf sfdviqdrpf ipptawvice rhmisvvpvt rvtmsrhrqf
      421 fsfyivglsr evylkdyypa rfcwglcpcl ewlkt
//
LOCUS       XP_040942060             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942060
VERSION     XP_040942060.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086126.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..138
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15806
     CDS             1..138
                     /gene="LOC121212737"
                     /coded_by="XM_041086126.1:183..599"
                     /db_xref="GeneID:121212737"
ORIGIN      
        1 mtpsspfsss pspspslspw vvnqchcqqt fqvpyphpkl lksytisknn dekvlsrtnt
       61 rvgvkdanst vfglsqnlrl yvqflapvnr gskfnkdkee kldyyvnmgy airtlieefl
      121 difyrelsfd iyrkkekg
//
LOCUS       XP_016674938             216 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674938
VERSION     XP_016674938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819449.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..216
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22808
     Region          24..176
                     /region_name="PAR1"
                     /note="PAR1 protein; pfam06521"
                     /db_xref="CDD:399493"
     CDS             1..216
                     /gene="LOC107894210"
                     /coded_by="XM_016819449.2:149..799"
                     /db_xref="GeneID:107894210"
ORIGIN      
        1 mpcfklplfl flsslflhas laeiicedlp ndvcafaias sgkrclletg leknekeeyq
       61 crtsevmver maeyienddc vracgvdrns igissdslle pqftaklcap acchkcpniv
      121 dlffnlaage gvflpdlcea qrinprrsmv elmsssgaal gpisseasal apsptppits
      181 evpdsneala silspssiss eassstsspg ptpllg
//
LOCUS       XP_016674934            1175 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion 1 protein 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674934
VERSION     XP_016674934.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819445.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1175
                     /product="sister chromatid cohesion 1 protein 4 isoform
                     X1"
                     /calculated_mol_wt=128150
     Region          1..99
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          650..722
                     /region_name="Rad21_Rec8_M_AtSYN1-like"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; cd21793"
                     /db_xref="CDD:439295"
     Site            order(651..653,656..663,666,669..670,677..684,698,
                     701..706,714..715,717..722)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439295"
     Region          1120..1170
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..1175
                     /gene="LOC107894208"
                     /coded_by="XM_016819445.2:653..4180"
                     /db_xref="GeneID:107894208"
ORIGIN      
        1 mfysqfilak kgplgtiwia ahlerklrkn qvadtdigvs vdsilfpevp ialrlsshll
       61 lgvvriysrk vnylfddcse allkikqafr stavdlppee ltapyhsitl petfdlddfe
      121 lpdneifqgn yfdnhissre qitlqdtmgn vvystsqfgf derfgegdts qiglldeelv
      181 ldrvavpgsv evseydlqgs dvpqkasnle avpmvcsgdq dedlaansef vendqdvatp
      241 glmesehhil telgnecven asnksnsldg dtgpvdqylh ndvdhdavpp kngcqfgdme
      301 keqtkppgss vhdalsveyt savgtvggpd gldrvedmqn gvmhsidrtd gecaespscs
      361 hitfdledps rrtclssicv ptsdgcleng qashksengn daettdnlee pfspakaias
      421 npscplqlps rptvidgeaq aslepndsen petpivhenl ssvqvlgsds ltaaeqnlvd
      481 lsrreeevha sgasievqve acqtqslepa lcddqlensn ncamsdlpap ekllsapegp
      541 ldkpsdllge stpdkevlae nedidsgtkl isgkkrgiae stltiesmns vesfgrprsm
      601 rtaetvpddd dflssilvgr ssvfkmkptp plevasmkra rsaprsstik rkvlmddtmv
      661 lhgdtireql vntedirhir kkapctrpei sliqrkflde ifsepiftgi sgdlaclhsk
      721 pydlssvris egeefhasse laknlecsvr psigeagieg ssvpvihgsd eqtqsaaips
      781 qadtqqgeys dlnaqqdrya vddvpqflqh epldgiteme idkdnvevat lancsvlnel
      841 glsshadldt ggtsnktaee vtnttdgsml niatclppdq kmttqpgeda seldlrndkg
      901 tnptevlehn vesiiaaete skaadellee skantsvevs vadcsepien gydslasvht
      961 gefvngaqna yetrygkidv adeaqvegsf ldnehndsif kgseesklds tysekvdmal
     1021 knaslidget piflevdavn eemisladnr aeyedvavan dteflnvddn elggdedddg
     1081 mpcgdesrlv ensgwssrtr avakylqnlf edevihghkv lsmdsllark tqkeasrmff
     1141 etlvlktrdy ihveqgkpfd niyimprakl mksdf
//
LOCUS       XP_016674935            1160 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion 1 protein 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674935
VERSION     XP_016674935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819446.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1160
                     /product="sister chromatid cohesion 1 protein 4 isoform
                     X2"
                     /calculated_mol_wt=126245
     Region          1..99
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          650..722
                     /region_name="Rad21_Rec8_M_AtSYN1-like"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; cd21793"
                     /db_xref="CDD:439295"
     Site            order(651..653,656..663,666,669..670,677..684,698,
                     701..706,714..715,717..722)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439295"
     Region          1120..>1144
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..1160
                     /gene="LOC107894208"
                     /coded_by="XM_016819446.2:653..4135"
                     /db_xref="GeneID:107894208"
ORIGIN      
        1 mfysqfilak kgplgtiwia ahlerklrkn qvadtdigvs vdsilfpevp ialrlsshll
       61 lgvvriysrk vnylfddcse allkikqafr stavdlppee ltapyhsitl petfdlddfe
      121 lpdneifqgn yfdnhissre qitlqdtmgn vvystsqfgf derfgegdts qiglldeelv
      181 ldrvavpgsv evseydlqgs dvpqkasnle avpmvcsgdq dedlaansef vendqdvatp
      241 glmesehhil telgnecven asnksnsldg dtgpvdqylh ndvdhdavpp kngcqfgdme
      301 keqtkppgss vhdalsveyt savgtvggpd gldrvedmqn gvmhsidrtd gecaespscs
      361 hitfdledps rrtclssicv ptsdgcleng qashksengn daettdnlee pfspakaias
      421 npscplqlps rptvidgeaq aslepndsen petpivhenl ssvqvlgsds ltaaeqnlvd
      481 lsrreeevha sgasievqve acqtqslepa lcddqlensn ncamsdlpap ekllsapegp
      541 ldkpsdllge stpdkevlae nedidsgtkl isgkkrgiae stltiesmns vesfgrprsm
      601 rtaetvpddd dflssilvgr ssvfkmkptp plevasmkra rsaprsstik rkvlmddtmv
      661 lhgdtireql vntedirhir kkapctrpei sliqrkflde ifsepiftgi sgdlaclhsk
      721 pydlssvris egeefhasse laknlecsvr psigeagieg ssvpvihgsd eqtqsaaips
      781 qadtqqgeys dlnaqqdrya vddvpqflqh epldgiteme idkdnvevat lancsvlnel
      841 glsshadldt ggtsnktaee vtnttdgsml niatclppdq kmttqpgeda seldlrndkg
      901 tnptevlehn vesiiaaete skaadellee skantsvevs vadcsepien gydslasvht
      961 gefvngaqna yetrygkidv adeaqvegsf ldnehndsif kgseesklds tysekvdmal
     1021 knaslidget piflevdavn eemisladnr aeyedvavan dteflnvddn elggdedddg
     1081 mpcgdesrlv ensgwssrtr avakylqnlf edevihghkv lsmdsllark tqkeasrmff
     1141 etlviplfps tcffksthll
//
LOCUS       XP_040942061            1100 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion 1 protein 4 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942061
VERSION     XP_040942061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086127.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1100
                     /product="sister chromatid cohesion 1 protein 4 isoform
                     X3"
                     /calculated_mol_wt=119266
     Region          1..99
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          650..722
                     /region_name="Rad21_Rec8_M_AtSYN1-like"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; cd21793"
                     /db_xref="CDD:439295"
     Site            order(651..653,656..663,666,669..670,677..684,698,
                     701..706,714..715,717..722)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439295"
     CDS             1..1100
                     /gene="LOC107894208"
                     /coded_by="XM_041086127.1:656..3958"
                     /db_xref="GeneID:107894208"
ORIGIN      
        1 mfysqfilak kgplgtiwia ahlerklrkn qvadtdigvs vdsilfpevp ialrlsshll
       61 lgvvriysrk vnylfddcse allkikqafr stavdlppee ltapyhsitl petfdlddfe
      121 lpdneifqgn yfdnhissre qitlqdtmgn vvystsqfgf derfgegdts qiglldeelv
      181 ldrvavpgsv evseydlqgs dvpqkasnle avpmvcsgdq dedlaansef vendqdvatp
      241 glmesehhil telgnecven asnksnsldg dtgpvdqylh ndvdhdavpp kngcqfgdme
      301 keqtkppgss vhdalsveyt savgtvggpd gldrvedmqn gvmhsidrtd gecaespscs
      361 hitfdledps rrtclssicv ptsdgcleng qashksengn daettdnlee pfspakaias
      421 npscplqlps rptvidgeaq aslepndsen petpivhenl ssvqvlgsds ltaaeqnlvd
      481 lsrreeevha sgasievqve acqtqslepa lcddqlensn ncamsdlpap ekllsapegp
      541 ldkpsdllge stpdkevlae nedidsgtkl isgkkrgiae stltiesmns vesfgrprsm
      601 rtaetvpddd dflssilvgr ssvfkmkptp plevasmkra rsaprsstik rkvlmddtmv
      661 lhgdtireql vntedirhir kkapctrpei sliqrkflde ifsepiftgi sgdlaclhsk
      721 pydlssvris egeefhasse laknlecsvr psigeagieg ssvpvihgsd eqtqsaaips
      781 qadtqqgeys dlnaqqdrya vddvpqflqh epldgiteme idkdnvevat lancsvlnel
      841 glsshadldt ggtsnktaee vtnttdgsml niatclppdq kmttqpgeda seldlrndkg
      901 tnptevlehn vesiiaaete skaadellee skantsvevs vadcsepien gydslasvht
      961 gefvngaqna yetrygkidv adeaqvegsf ldnehndsif kgseesklds tysekvdmal
     1021 knaslidget piflevdavn eemisladnr aeyedvavan dteflnvddn elggdedddg
     1081 mpcgdesrlv ensgwssrts
//
LOCUS       XP_040942062            1028 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion 1 protein 4 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942062
VERSION     XP_040942062.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086128.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1028
                     /product="sister chromatid cohesion 1 protein 4 isoform
                     X4"
                     /calculated_mol_wt=111397
     Region          503..575
                     /region_name="Rad21_Rec8_M_AtSYN1-like"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; cd21793"
                     /db_xref="CDD:439295"
     Site            order(504..506,509..516,519,522..523,530..537,551,
                     554..559,567..568,570..575)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439295"
     Region          973..1023
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..1028
                     /gene="LOC107894208"
                     /coded_by="XM_041086128.1:414..3500"
                     /db_xref="GeneID:107894208"
ORIGIN      
        1 mgnvvystsq fgfderfgeg dtsqigllde elvldrvavp gsvevseydl qgsdvpqkas
       61 nleavpmvcs gdqdedlaan sefvendqdv atpglmeseh hiltelgnec venasnksns
      121 ldgdtgpvdq ylhndvdhda vppkngcqfg dmekeqtkpp gssvhdalsv eytsavgtvg
      181 gpdgldrved mqngvmhsid rtdgecaesp scshitfdle dpsrrtclss icvptsdgcl
      241 engqashkse ngndaettdn leepfspaka iasnpscplq lpsrptvidg eaqaslepnd
      301 senpetpivh enlssvqvlg sdsltaaeqn lvdlsrreee vhasgasiev qveacqtqsl
      361 epalcddqle nsnncamsdl papekllsap egpldkpsdl lgestpdkev laenedidsg
      421 tklisgkkrg iaestlties mnsvesfgrp rsmrtaetvp ddddflssil vgrssvfkmk
      481 ptpplevasm krarsaprss tikrkvlmdd tmvlhgdtir eqlvntedir hirkkapctr
      541 peisliqrkf ldeifsepif tgisgdlacl hskpydlssv risegeefha sselaknlec
      601 svrpsigeag iegssvpvih gsdeqtqsaa ipsqadtqqg eysdlnaqqd ryavddvpqf
      661 lqhepldgit emeidkdnve vatlancsvl nelglsshad ldtggtsnkt aeevtnttdg
      721 smlniatclp pdqkmttqpg edaseldlrn dkgtnptevl ehnvesiiaa eteskaadel
      781 leeskantsv evsvadcsep iengydslas vhtgefvnga qnayetrygk idvadeaqve
      841 gsfldnehnd sifkgseesk ldstysekvd malknaslid getpiflevd avneemisla
      901 dnraeyedva vandteflnv ddnelggded ddgmpcgdes rlvensgwss rtravakylq
      961 nlfedevihg hkvlsmdsll arktqkeasr mffetlvlkt rdyihveqgk pfdniyimpr
     1021 aklmksdf
//
LOCUS       XP_016674937             991 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion 1 protein 4 isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_016674937
VERSION     XP_016674937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819448.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..991
                     /product="sister chromatid cohesion 1 protein 4 isoform
                     X5"
                     /calculated_mol_wt=107508
     Region          466..538
                     /region_name="Rad21_Rec8_M_AtSYN1-like"
                     /note="Middle HEAT-repeat binding domain found in
                     Arabidopsis thaliana sister chromatid cohesion 1 protein
                     1-4 (SYN1-4) and similar proteins; cd21793"
                     /db_xref="CDD:439295"
     Site            order(467..469,472..479,482,485..486,493..500,514,
                     517..522,530..531,533..538)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439295"
     Region          936..986
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..991
                     /gene="LOC107894208"
                     /coded_by="XM_016819448.2:103..3078"
                     /db_xref="GeneID:107894208"
ORIGIN      
        1 mcrtakhcql ydlqgsdvpq kasnleavpm vcsgdqdedl aansefvend qdvatpglme
       61 sehhiltelg necvenasnk snsldgdtgp vdqylhndvd hdavppkngc qfgdmekeqt
      121 kppgssvhda lsveytsavg tvggpdgldr vedmqngvmh sidrtdgeca espscshitf
      181 dledpsrrtc lssicvptsd gclengqash ksengndaet tdnleepfsp akaiasnpsc
      241 plqlpsrptv idgeaqasle pndsenpetp ivhenlssvq vlgsdsltaa eqnlvdlsrr
      301 eeevhasgas ievqveacqt qslepalcdd qlensnncam sdlpapekll sapegpldkp
      361 sdllgestpd kevlaenedi dsgtklisgk krgiaestlt iesmnsvesf grprsmrtae
      421 tvpddddfls silvgrssvf kmkptpplev asmkrarsap rsstikrkvl mddtmvlhgd
      481 tireqlvnte dirhirkkap ctrpeisliq rkfldeifse piftgisgdl aclhskpydl
      541 ssvrisegee fhasselakn lecsvrpsig eagiegssvp vihgsdeqtq saaipsqadt
      601 qqgeysdlna qqdryavddv pqflqhepld gitemeidkd nvevatlanc svlnelglss
      661 hadldtggts nktaeevtnt tdgsmlniat clppdqkmtt qpgedaseld lrndkgtnpt
      721 evlehnvesi iaaeteskaa delleeskan tsvevsvadc sepiengyds lasvhtgefv
      781 ngaqnayetr ygkidvadea qvegsfldne hndsifkgse eskldstyse kvdmalknas
      841 lidgetpifl evdavneemi sladnraeye dvavandtef lnvddnelgg dedddgmpcg
      901 desrlvensg wssrtravak ylqnlfedev ihghkvlsmd sllarktqke asrmffetlv
      961 lktrdyihve qgkpfdniyi mpraklmksd f
//
LOCUS       XP_040942063             107 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 6-like [Gossypium hirsutum].
ACCESSION   XP_040942063
VERSION     XP_040942063.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086129.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="DEAD-box ATP-dependent RNA helicase 6-like"
                     /calculated_mol_wt=11711
     Region          21..>90
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            65..71
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..107
                     /gene="LOC107894207"
                     /coded_by="XM_041086129.1:25..348"
                     /db_xref="GeneID:107894207"
ORIGIN      
        1 mppsdtrykt edvtatkgne fedyflkrel imgiyekgfe rpspiqeesi pialtgsdil
       61 arakngtgkt aafcipalek idqdnnviqg amprdvfntl ppfscgl
//
LOCUS       XP_040942064             107 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 6-like [Gossypium hirsutum].
ACCESSION   XP_040942064
VERSION     XP_040942064.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086130.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..107
                     /product="DEAD-box ATP-dependent RNA helicase 6-like"
                     /calculated_mol_wt=11711
     Region          21..>90
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            65..71
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..107
                     /gene="LOC107894207"
                     /coded_by="XM_041086130.1:25..348"
                     /db_xref="GeneID:107894207"
ORIGIN      
        1 mppsdtrykt edvtatkgne fedyflkrel imgiyekgfe rpspiqeesi pialtgsdil
       61 arakngtgkt aafcipalek idqdnnviqg amprdvfntl ppfscgl
//
LOCUS       XP_016685346             152 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-induced protein 6B [Gossypium hirsutum].
ACCESSION   XP_016685346
VERSION     XP_016685346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="auxin-induced protein 6B"
                     /calculated_mol_wt=17073
     Region          17..105
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..152
                     /gene="LOC107903712"
                     /coded_by="XM_016829857.2:184..642"
                     /db_xref="GeneID:107903712"
ORIGIN      
        1 myhgmgkcqk irqivrirqm lkqwrrnari tannnnngha psdvpaghva vcvgtslrrf
       61 ivratylnhp mfrkllvqte eeygfnnvgp ltipcdeslf eeilravsrs dsgrfstfev
      121 lqrccqvgmk nklgglgesr pllhgvadks vy
//
LOCUS       XP_016685347             211 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: probable ribosome-binding factor A,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016685347
VERSION     XP_016685347.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829858.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685347.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..211
                     /product="LOW QUALITY PROTEIN: probable ribosome-binding
                     factor A, chloroplastic"
                     /calculated_mol_wt=23619
     Region          46..175
                     /region_name="RbfA"
                     /note="Ribosome-binding factor RbfA [Translation,
                     ribosomal structure and biogenesis]; COG0858"
                     /db_xref="CDD:440619"
     CDS             1..211
                     /gene="LOC107903713"
                     /coded_by="XM_016829858.2:106..741"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107903713"
ORIGIN      
        1 mphlllhyhv pittvhlrcs fpspkptahi hlrsnpttga tvkcmanprr vkmvskqirr
       61 elsdmlltdk vlqyailpea algadrylss lttisdvevs adlqvvkvyv sxfgdergke
      121 ialaglkska kyvrselgkr mklrltpeir fiedeslerg srviaildki kaekktlade
      181 dyeeeaessv saqddrdwes ddpdediiyv k
//
LOCUS       XP_016685348              53 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685348
VERSION     XP_016685348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829859.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..53
                     /product="uncharacterized protein"
                     /calculated_mol_wt=5466
     CDS             1..53
                     /gene="LOC107903714"
                     /coded_by="XM_016829859.2:178..339"
                     /db_xref="GeneID:107903714"
ORIGIN      
        1 mapppgpysg tstlalvara salsfglvyg siklkylkak arsqrkaeak ahh
//
LOCUS       XP_016727813             760 aa            linear   PLN 06-AUG-2024
DEFINITION  far upstream element-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016727813
VERSION     XP_016727813.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872324.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727813.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..760
                     /product="far upstream element-binding protein 2"
                     /calculated_mol_wt=80378
     Region          <2..>173
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          181..248
                     /region_name="KH_1"
                     /note="KH domain; pfam00013"
                     /db_xref="CDD:459630"
     Region          278..345
                     /region_name="KH_1"
                     /note="KH domain; pfam00013"
                     /db_xref="CDD:459630"
     Region          403..>671
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..760
                     /gene="LOC107939038"
                     /coded_by="XM_016872324.2:137..2419"
                     /db_xref="GeneID:107939038"
ORIGIN      
        1 maeeeavapa pspvpsdlkr kledvephdp hadnmprdsa ldpdaqdnda apsdlseakr
       61 prldddktdg lasengfeae kshepakeee eglqqnelnk qaedgdspak eaeetvkpeq
      121 yegtaeetdg qsadnpetad aelgkvesfe adngqepake dnkqpsddlp qqevddgtti
      181 trkmevpnak vgvligkagd tirylqynsg akiqimrdad adrdaptrpv eiigtlssii
      241 kaeklinavi aeadaggsps lvarglattq aagaadqiei qvpnekvgli igrggetikg
      301 lqtksgariq lipqhlpegd gskertvrvt gdkkqieiar emmkdvmnqt vrpstlsggf
      361 nqqgyrprgn sgppqwgprg hppqtsydyq qrgpypshns hyqppyggyp shqmaprsnf
      421 gssweqrphs mqgppqsggy dyysrqggvs nphltsipgh gpgpspapam gpppsqlsyn
      481 ygqprgpady ahpppysqaa pqhgyghgye ekyenhtpvq hpygghgsaq pgyaqpgpqp
      541 gyapqqqygk ppsygmqsqg pqtygppanq pgevpyqgpt aqsygsnvpp qqqyayassg
      601 ptqqsyppyg sappsdgysq ppavggqayp qpgsqpvpgy sqptayaqas saagygqypp
      661 sqqgyseqtq apnnagfgyq gaqdsgygga paatygappa cgqatyaqtt aaqstydqsi
      721 pqsgsfaaap gsapagygkt vspqpgyaqy dstqmyaapr
//
LOCUS       XP_040942065             536 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin-folding cofactor E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942065
VERSION     XP_040942065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086131.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="tubulin-folding cofactor E isoform X1"
                     /calculated_mol_wt=59456
     Region          9..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          67..>363
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          159..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          260..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          351..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          451..533
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..536
                     /gene="LOC107939040"
                     /coded_by="XM_041086131.1:254..1864"
                     /db_xref="GeneID:107939040"
ORIGIN      
        1 meqttfftlg qrvhsstdpr rvgtvkfvgn vegysgtwvg vdwdnegdgk hdgsingvry
       61 lqgrsqnsas flrpqnlslg isllqalklr yqsqsteqde demyvlsasn krvsvqllgk
      121 dkiqdklsrf eeltsasisy lgvstpgdpa eisasvpnlk eldlmgnlit dwkdvgtice
      181 qlphlvalnl snnlmtqnit glpllkairv lvlnstginw sqveilehsl pvieelhlmg
      241 nnissikpts sstvqgfdsl rllnledncl aewdeilkls qlksleqlyl nknkltcify
      301 pdknkiqefl snhesceesy fpfqnlrcll lgsneindla sidslntfpk lidirfsdnp
      361 iadpgrgglp rfvliarlak vemlngseis arerkeseir yvrlvmskll dnpeeinclh
      421 prfvelknfy giederpsvg aagpqkmasg llsitlkcva ssvgeklplt kklpatttvg
      481 klkalcvsff klkslklklf lqeegsplpm llddematlm dmgignesti ivdees
//
LOCUS       XP_016727817             536 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin-folding cofactor E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727817
VERSION     XP_016727817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="tubulin-folding cofactor E isoform X1"
                     /calculated_mol_wt=59456
     Region          9..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          67..>363
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          159..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          260..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          351..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          451..533
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..536
                     /gene="LOC107939040"
                     /coded_by="XM_016872328.2:169..1779"
                     /db_xref="GeneID:107939040"
ORIGIN      
        1 meqttfftlg qrvhsstdpr rvgtvkfvgn vegysgtwvg vdwdnegdgk hdgsingvry
       61 lqgrsqnsas flrpqnlslg isllqalklr yqsqsteqde demyvlsasn krvsvqllgk
      121 dkiqdklsrf eeltsasisy lgvstpgdpa eisasvpnlk eldlmgnlit dwkdvgtice
      181 qlphlvalnl snnlmtqnit glpllkairv lvlnstginw sqveilehsl pvieelhlmg
      241 nnissikpts sstvqgfdsl rllnledncl aewdeilkls qlksleqlyl nknkltcify
      301 pdknkiqefl snhesceesy fpfqnlrcll lgsneindla sidslntfpk lidirfsdnp
      361 iadpgrgglp rfvliarlak vemlngseis arerkeseir yvrlvmskll dnpeeinclh
      421 prfvelknfy giederpsvg aagpqkmasg llsitlkcva ssvgeklplt kklpatttvg
      481 klkalcvsff klkslklklf lqeegsplpm llddematlm dmgignesti ivdees
//
LOCUS       XP_016727818             536 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin-folding cofactor E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727818
VERSION     XP_016727818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="tubulin-folding cofactor E isoform X1"
                     /calculated_mol_wt=59456
     Region          9..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          67..>363
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          159..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          260..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          351..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          451..533
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..536
                     /gene="LOC107939040"
                     /coded_by="XM_016872329.2:254..1864"
                     /db_xref="GeneID:107939040"
ORIGIN      
        1 meqttfftlg qrvhsstdpr rvgtvkfvgn vegysgtwvg vdwdnegdgk hdgsingvry
       61 lqgrsqnsas flrpqnlslg isllqalklr yqsqsteqde demyvlsasn krvsvqllgk
      121 dkiqdklsrf eeltsasisy lgvstpgdpa eisasvpnlk eldlmgnlit dwkdvgtice
      181 qlphlvalnl snnlmtqnit glpllkairv lvlnstginw sqveilehsl pvieelhlmg
      241 nnissikpts sstvqgfdsl rllnledncl aewdeilkls qlksleqlyl nknkltcify
      301 pdknkiqefl snhesceesy fpfqnlrcll lgsneindla sidslntfpk lidirfsdnp
      361 iadpgrgglp rfvliarlak vemlngseis arerkeseir yvrlvmskll dnpeeinclh
      421 prfvelknfy giederpsvg aagpqkmasg llsitlkcva ssvgeklplt kklpatttvg
      481 klkalcvsff klkslklklf lqeegsplpm llddematlm dmgignesti ivdees
//
LOCUS       XP_016727819             536 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin-folding cofactor E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727819
VERSION     XP_016727819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..536
                     /product="tubulin-folding cofactor E isoform X1"
                     /calculated_mol_wt=59456
     Region          9..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          67..>363
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          159..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          260..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          351..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          451..533
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..536
                     /gene="LOC107939040"
                     /coded_by="XM_016872330.2:254..1864"
                     /db_xref="GeneID:107939040"
ORIGIN      
        1 meqttfftlg qrvhsstdpr rvgtvkfvgn vegysgtwvg vdwdnegdgk hdgsingvry
       61 lqgrsqnsas flrpqnlslg isllqalklr yqsqsteqde demyvlsasn krvsvqllgk
      121 dkiqdklsrf eeltsasisy lgvstpgdpa eisasvpnlk eldlmgnlit dwkdvgtice
      181 qlphlvalnl snnlmtqnit glpllkairv lvlnstginw sqveilehsl pvieelhlmg
      241 nnissikpts sstvqgfdsl rllnledncl aewdeilkls qlksleqlyl nknkltcify
      301 pdknkiqefl snhesceesy fpfqnlrcll lgsneindla sidslntfpk lidirfsdnp
      361 iadpgrgglp rfvliarlak vemlngseis arerkeseir yvrlvmskll dnpeeinclh
      421 prfvelknfy giederpsvg aagpqkmasg llsitlkcva ssvgeklplt kklpatttvg
      481 klkalcvsff klkslklklf lqeegsplpm llddematlm dmgignesti ivdees
//
LOCUS       XP_040942066             528 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin-folding cofactor E isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942066
VERSION     XP_040942066.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086132.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..528
                     /product="tubulin-folding cofactor E isoform X2"
                     /calculated_mol_wt=58669
     Region          9..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          67..>355
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          159..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..361
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          443..525
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..528
                     /gene="LOC107939040"
                     /coded_by="XM_041086132.1:169..1755"
                     /db_xref="GeneID:107939040"
ORIGIN      
        1 meqttfftlg qrvhsstdpr rvgtvkfvgn vegysgtwvg vdwdnegdgk hdgsingvry
       61 lqgrsqnsas flrpqnlslg isllqalklr yqsqsteqde demyvlsasn krvsvqllgk
      121 dkiqdklsrf eeltsasisy lgvstpgdpa eisasvpnlk eldlmgnlit dwkdvgtice
      181 qlphlvalnl snnlmtqnit glpllkairv lvlnstginw sqveilehsl pvieelhlmg
      241 nnissikgfd slrllnledn claewdeilk lsqlksleql ylnknkltci fypdknkiqe
      301 flsnhescee syfpfqnlrc lllgsneind lasidslntf pklidirfsd npiadpgrgg
      361 lprfvliarl akvemlngse isarerkese iryvrlvmsk lldnpeeinc lhprfvelkn
      421 fygiederps vgaagpqkma sgllsitlkc vassvgeklp ltkklpattt vgklkalcvs
      481 ffklkslklk lflqeegspl pmllddemat lmdmgignes tiivdees
//
LOCUS       XP_016707069             417 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB35 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707069
VERSION     XP_016707069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851580.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..417
                     /product="transcription factor MYB35 isoform X1"
                     /calculated_mol_wt=46456
     Region          1..>162
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..417
                     /gene="LOC107921764"
                     /coded_by="XM_016851580.2:163..1416"
                     /db_xref="GeneID:107921764"
ORIGIN      
        1 mvrppccdkl nvkkglwtee edakilayvs khgtgnwtav pkkaglrrcg kscrlrwtny
       61 lrpdlkresf tpqeeeliir lhaalgsrly vlglflvgsq thptfclsct mkiyhtfmws
      121 iiaqqlpgrt dndvknywnt klrkklsemg idpvthkpfs qvladygnig gllksrtrig
      181 slnrdmknsf mikpephppq paiategfsn innsrvmttm aspgiepiqe nffpssninq
      241 haatcgsldl lsqlqaiklv teasnyagyq iispqfpnqy tlslsspsss sstsstcstt
      301 aqektglafs wrdflledaf lpydhhpqgq dhipefeskd iapqnhsgne tsaehidddk
      361 niiinnnsrv lsgmdsells ygiqassste ssfvaamldq enemfsefan lledpcy
//
LOCUS       XP_016707070             417 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB35 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707070
VERSION     XP_016707070.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851581.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..417
                     /product="transcription factor MYB35 isoform X1"
                     /calculated_mol_wt=46456
     Region          1..>162
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..417
                     /gene="LOC107921764"
                     /coded_by="XM_016851581.2:193..1446"
                     /db_xref="GeneID:107921764"
ORIGIN      
        1 mvrppccdkl nvkkglwtee edakilayvs khgtgnwtav pkkaglrrcg kscrlrwtny
       61 lrpdlkresf tpqeeeliir lhaalgsrly vlglflvgsq thptfclsct mkiyhtfmws
      121 iiaqqlpgrt dndvknywnt klrkklsemg idpvthkpfs qvladygnig gllksrtrig
      181 slnrdmknsf mikpephppq paiategfsn innsrvmttm aspgiepiqe nffpssninq
      241 haatcgsldl lsqlqaiklv teasnyagyq iispqfpnqy tlslsspsss sstsstcstt
      301 aqektglafs wrdflledaf lpydhhpqgq dhipefeskd iapqnhsgne tsaehidddk
      361 niiinnnsrv lsgmdsells ygiqassste ssfvaamldq enemfsefan lledpcy
//
LOCUS       XP_040942068             387 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB35 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942068
VERSION     XP_040942068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086134.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..387
                     /product="transcription factor MYB35 isoform X2"
                     /calculated_mol_wt=43021
     Region          1..>132
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..387
                     /gene="LOC107921764"
                     /coded_by="XM_041086134.1:192..1355"
                     /db_xref="GeneID:107921764"
ORIGIN      
        1 mvrppccdkl nvkkglwtee edakilayvs khgtgnwtav pkkaglrrcg kscrlrwtny
       61 lrpdlkresf tpqeeeliir lhaalgsrws iiaqqlpgrt dndvknywnt klrkklsemg
      121 idpvthkpfs qvladygnig gllksrtrig slnrdmknsf mikpephppq paiategfsn
      181 innsrvmttm aspgiepiqe nffpssninq haatcgsldl lsqlqaiklv teasnyagyq
      241 iispqfpnqy tlslsspsss sstsstcstt aqektglafs wrdflledaf lpydhhpqgq
      301 dhipefeskd iapqnhsgne tsaehidddk niiinnnsrv lsgmdsells ygiqassste
      361 ssfvaamldq enemfsefan lledpcy
//
LOCUS       XP_016675445             270 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_016675445
VERSION     XP_016675445.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819956.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675445.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..270
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=30571
     Region          <4..58
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..270
                     /gene="LOC107894704"
                     /coded_by="XM_016819956.2:108..920"
                     /db_xref="GeneID:107894704"
ORIGIN      
        1 mtnfeketgk gfsqrqlknr wdalkkewka wkklkgedtg lgwnpikrtv dasddwwesr
       61 lkvvpeaqkf rtlgidpefe gkldqmfmgi vatgdkawap ssgtlrsdif kdvnneipee
      121 neeenvrndv rilndvhisn dvhisndvqi dgngqkrknp eissshfktg rkksskqigg
      181 aarlssqiek lcnaannmsq atssltpimd pygipqavkv ldsmseevle asllyffalr
      241 lllnkdkrim flsinpkira lwlktemeds
//
LOCUS       XP_016675624             236 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675624
VERSION     XP_016675624.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820135.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675624.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..236
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=26026
     CDS             1..236
                     /gene="LOC107894979"
                     /coded_by="XM_016820135.2:103..813"
                     /db_xref="GeneID:107894979"
ORIGIN      
        1 manprrnsys tnqsvdgsfq sqtqssssls slkhllkkph alpfllllll lltwvslrlq
       61 yssrfrhqql gqdghgddds kanlvrfksg lpsaivkdkr gwlldpvsla lqfgvrgqml
      121 tilggavscs qvhigeirrg girgnhrhys cnetfviwga ktkfrlennq mdgrgyaevt
      181 igedevvvaa spsgtahalv nvdtfrntyf vgcqdgmvks nssntdfnvw knltlf
//
LOCUS       XP_016675626             229 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675626
VERSION     XP_016675626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..229
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=25269
     CDS             1..229
                     /gene="LOC107894979"
                     /coded_by="XM_016820137.2:143..832"
                     /db_xref="GeneID:107894979"
ORIGIN      
        1 manprrnsys tnqsvdgsfq sqtqssssls slkhllkkph alpfllllll lltwvslrlq
       61 yssrfrhqql gqdghgddds kanlvrfksg lpsaivkdkr gwlldpvsla lqfgvrggav
      121 scsqvhigei rrggirgnhr hyscnetfvi wgaktkfrle nnqmdgrgya evtigedevv
      181 vaaspsgtah alvnvdtfrn tyfvgcqdgm vksnssntdf nvwknltlf
//
LOCUS       XP_016675627             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675627
VERSION     XP_016675627.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820138.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..185
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=20793
     CDS             1..185
                     /gene="LOC107894979"
                     /coded_by="XM_016820138.2:109..666"
                     /db_xref="GeneID:107894979"
ORIGIN      
        1 manprrnsys tnqsvdgsfq sqtqssssls slkhllkkph alpfllllll lltwvslrlq
       61 yssrfrhqql gqdghgddds kanlvrfksg lpsaivkdkr gwlldpvsla lqfgvrgqml
      121 tilggavscs qvhigeirrg girgnhrhys cnetfviwga ktkfrkyryh avaqmevyer
      181 csrhs
//
LOCUS       XP_040942069             242 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942069
VERSION     XP_040942069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086135.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..242
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27851
     Region          92..211
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(94..97,131..132,135,159,198)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..242
                     /gene="LOC121212738"
                     /coded_by="XM_041086135.1:494..1222"
                     /db_xref="GeneID:121212738"
ORIGIN      
        1 meprinllni hgrrrkfnss drkdeiaiti walwfsrnkf vheqkmqsie evvtfirgfs
       61 refrgissil qhprprdlnk wvpplpnwvk invdtgfsaa rqhaasgfii rndewlimgs
      121 gfkthnlvrs vvldeatvvl hglqfapemg fsnvilesds rlviqnlqss kedyseirpl
      181 twdakalarn fsscifefva rdwnsaaham aveglkrfed ffwvedapvt alemadsdqr
      241 fn
//
LOCUS       XP_016675444             100 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016675444
VERSION     XP_016675444.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..100
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11319
     CDS             1..100
                     /gene="LOC107894702"
                     /coded_by="XM_016819955.2:36..338"
                     /db_xref="GeneID:107894702"
ORIGIN      
        1 mepsyvrrgh wlsgtvtaas ggqkfpknip fspfhmehrs gvqiprklvk frpkvekpfd
       61 fspfqrgprr kpkefrgfss rrkgvlrwhl iggggnkgyg
//
LOCUS       XP_016675622             506 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCHC domain-containing protein 7 [Gossypium hirsutum].
ACCESSION   XP_016675622
VERSION     XP_016675622.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820133.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="zinc finger CCHC domain-containing protein 7"
                     /calculated_mol_wt=55557
     Region          184..350
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          335..>383
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..506
                     /gene="LOC107894978"
                     /coded_by="XM_016820133.2:168..1688"
                     /db_xref="GeneID:107894978"
ORIGIN      
        1 makkgkaksa kfeieenesg pldskplmvl sisddeeane dlslkiveka llvkatrfse
       61 gchgvsddpg vvsvvglass srggsdvagt sggreqadld leskkivrrk kkktktekvt
      121 vaedgnkaem iekvetveei imandvetve sldsntvdks dnivlrkllr garyfdppds
      181 gwgtcyncge eghmavncks askrkkpcfl cgsldhgarq csktqdcfic kksghrakdc
      241 pdkhnsgskh grfclrcggs ghdmfscrnd ysrddikeiq cyvcksfghl ccvnsvdtna
      301 revscyrcgq vghtglscgr srgetkettd ngspsicyqc gegghlarec iastpssslc
      361 ykcgggghfa recssakvgk rnrepstpse rarrenrefl gyksaphdhg kvrkrkkiks
      421 eekgfstprk ekqrggwire dagdfsnrky trnhwnspst pstegrkkss grilgsqssk
      481 pknshrysas rfssfgngep rtynww
//
LOCUS       XP_016674953             344 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-binding protein HEXBP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674953
VERSION     XP_016674953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819464.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="DNA-binding protein HEXBP isoform X1"
                     /calculated_mol_wt=37816
     Region          35..126
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          174..299
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..344
                     /gene="LOC107894219"
                     /coded_by="XM_016819464.2:505..1539"
                     /db_xref="GeneID:107894219"
ORIGIN      
        1 miekvqkvee ammakateai esldpntwgs ryfhppdggw etcyncgeeg hiavncksas
       61 twkkpcfvcg sldhgarqcs kncfickkcg hhhvkgcpdk yksssnpgni clrcgvsgyd
      121 mfscrndysq ddikvsscsl vfliivfsia falssfmvfv lltvllmffl pnqeiqcyic
      181 ksfghiccin fvdtsprevs cyrcgqlght glnsifmqsy ggslgetket tdnrspslcy
      241 kcgegghfah ecttgtasss lyykcggghf arqcttgaas slcykcgege hsihecssam
      301 vgkrnresst pnlrsrlenk dllgyksvph dngksrckrr knpv
//
LOCUS       XP_040942070             344 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-binding protein HEXBP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942070
VERSION     XP_040942070.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086136.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..344
                     /product="DNA-binding protein HEXBP isoform X1"
                     /calculated_mol_wt=37816
     Region          35..126
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          174..299
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..344
                     /gene="LOC107894219"
                     /coded_by="XM_041086136.1:602..1636"
                     /db_xref="GeneID:107894219"
ORIGIN      
        1 miekvqkvee ammakateai esldpntwgs ryfhppdggw etcyncgeeg hiavncksas
       61 twkkpcfvcg sldhgarqcs kncfickkcg hhhvkgcpdk yksssnpgni clrcgvsgyd
      121 mfscrndysq ddikvsscsl vfliivfsia falssfmvfv lltvllmffl pnqeiqcyic
      181 ksfghiccin fvdtsprevs cyrcgqlght glnsifmqsy ggslgetket tdnrspslcy
      241 kcgegghfah ecttgtasss lyykcggghf arqcttgaas slcykcgege hsihecssam
      301 vgkrnresst pnlrsrlenk dllgyksvph dngksrckrr knpv
//
LOCUS       XP_040942071             305 aa            linear   PLN 06-AUG-2024
DEFINITION  cellular nucleic acid-binding protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942071
VERSION     XP_040942071.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086137.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="cellular nucleic acid-binding protein isoform
                     X2"
                     /calculated_mol_wt=33216
     Region          35..126
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          174..299
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..305
                     /gene="LOC107894219"
                     /coded_by="XM_041086137.1:509..1426"
                     /db_xref="GeneID:107894219"
ORIGIN      
        1 miekvqkvee ammakateai esldpntwgs ryfhppdggw etcyncgeeg hiavncksas
       61 twkkpcfvcg sldhgarqcs kncfickkcg hhhvkgcpdk yksssnpgni clrcgvsgyd
      121 mfscrndysq ddikvsscsl vfliivfsia falssfmvfv lltvllmffl pnqeiqcyic
      181 ksfghiccin fvdtsprevs cyrcgqlght glnsifmqsy ggslgetket tdnrspslcy
      241 kcgegghfah ecttgtasss lyykcggghf arqcttgaas slcykcgege hsihecssam
      301 nnssa
//
LOCUS       XP_016674955             305 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-binding protein HEXBP isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016674955
VERSION     XP_016674955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819466.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="DNA-binding protein HEXBP isoform X3"
                     /calculated_mol_wt=33476
     Region          <42..>82
                     /region_name="AIR1"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; COG5082"
                     /db_xref="CDD:227414"
     Region          109..260
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..305
                     /gene="LOC107894219"
                     /coded_by="XM_016819466.2:505..1422"
                     /db_xref="GeneID:107894219"
ORIGIN      
        1 miekvqkvee ammakateai esldpntwgs ryfhppdggw etcyncgeeg hiavncksas
       61 twkkpcfvcg sldhgarqcs kncfickkcg hhhvkgcpdk yksssnpgni clrcgvsgyd
      121 mfscrndysq ddikeiqcyi cksfghicci nfvdtsprev scyrcgqlgh tglnsifmqs
      181 yggslgetke ttdnrspslc ykcgegghfa hecttgtass slyykcgggh farqcttgaa
      241 sslcykcgeg ehsihecssa mvgkrnress tpnlrsrlen kdllgyksvp hdngksrckr
      301 rknpv
//
LOCUS       XP_040942072             305 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-binding protein HEXBP isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942072
VERSION     XP_040942072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086138.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..305
                     /product="DNA-binding protein HEXBP isoform X3"
                     /calculated_mol_wt=33476
     Region          <42..>82
                     /region_name="AIR1"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; COG5082"
                     /db_xref="CDD:227414"
     Region          109..260
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..305
                     /gene="LOC107894219"
                     /coded_by="XM_041086138.1:602..1519"
                     /db_xref="GeneID:107894219"
ORIGIN      
        1 miekvqkvee ammakateai esldpntwgs ryfhppdggw etcyncgeeg hiavncksas
       61 twkkpcfvcg sldhgarqcs kncfickkcg hhhvkgcpdk yksssnpgni clrcgvsgyd
      121 mfscrndysq ddikeiqcyi cksfghicci nfvdtsprev scyrcgqlgh tglnsifmqs
      181 yggslgetke ttdnrspslc ykcgegghfa hecttgtass slyykcgggh farqcttgaa
      241 sslcykcgeg ehsihecssa mvgkrnress tpnlrsrlen kdllgyksvp hdngksrckr
      301 rknpv
//
LOCUS       XP_040942073             266 aa            linear   PLN 06-AUG-2024
DEFINITION  cellular nucleic acid-binding protein homolog isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942073
VERSION     XP_040942073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086139.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..266
                     /product="cellular nucleic acid-binding protein homolog
                     isoform X4"
                     /calculated_mol_wt=28876
     Region          <42..>82
                     /region_name="AIR1"
                     /note="Arginine methyltransferase-interacting protein,
                     contains RING Zn-finger [Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; COG5082"
                     /db_xref="CDD:227414"
     Region          109..260
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..266
                     /gene="LOC107894219"
                     /coded_by="XM_041086139.1:509..1309"
                     /db_xref="GeneID:107894219"
ORIGIN      
        1 miekvqkvee ammakateai esldpntwgs ryfhppdggw etcyncgeeg hiavncksas
       61 twkkpcfvcg sldhgarqcs kncfickkcg hhhvkgcpdk yksssnpgni clrcgvsgyd
      121 mfscrndysq ddikeiqcyi cksfghicci nfvdtsprev scyrcgqlgh tglnsifmqs
      181 yggslgetke ttdnrspslc ykcgegghfa hecttgtass slyykcgggh farqcttgaa
      241 sslcykcgeg ehsihecssa mnnssa
//
LOCUS       XP_016674525             480 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 1 [Gossypium hirsutum].
ACCESSION   XP_016674525
VERSION     XP_016674525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="protein IQ-DOMAIN 1"
                     /calculated_mol_wt=52937
     Region          <406..459
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..480
                     /gene="LOC107893896"
                     /coded_by="XM_016819036.2:393..1835"
                     /db_xref="GeneID:107893896"
ORIGIN      
        1 mgkkgkwlss lkkaftpesk ekktqkskek vlvkqvdwgs ndsdaatlet lklspppqpq
       61 eaklieaeve pseqtypvev aiaaaaaval aapaeavadv vrrqsntgpr fagksneeva
      121 aikiqtafrv ylakralhal rglvrlksmm egpmvkrqaa gtlrcmqkls rvqcqirlrr
      181 irmteenqal qrqllqkhak eivnlqmged wddslqskeq ieasllskhe asmrrekama
      241 ysfthqqtwk nasrsmnalf mdpnnlswgw swlerwmaar pwegrgmaek eqnndqssvk
      301 sgrssfggdi skayaryqln ldkqslkasq kpsrtsslqs pstpkpvsmp trklkspspr
      361 ssvvapdddm rstvsvlser nrrhtiggss vlddeslass pslpsymvpt qsarlktrlq
      421 splgleangt tpekgpilst kkrlsyppsp arprrhsgpp kvdsgsdtnt evaavngdgn
//
LOCUS       XP_016674526             480 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 1 [Gossypium hirsutum].
ACCESSION   XP_016674526
VERSION     XP_016674526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819037.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..480
                     /product="protein IQ-DOMAIN 1"
                     /calculated_mol_wt=52937
     Region          <406..459
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..480
                     /gene="LOC107893896"
                     /coded_by="XM_016819037.2:427..1869"
                     /db_xref="GeneID:107893896"
ORIGIN      
        1 mgkkgkwlss lkkaftpesk ekktqkskek vlvkqvdwgs ndsdaatlet lklspppqpq
       61 eaklieaeve pseqtypvev aiaaaaaval aapaeavadv vrrqsntgpr fagksneeva
      121 aikiqtafrv ylakralhal rglvrlksmm egpmvkrqaa gtlrcmqkls rvqcqirlrr
      181 irmteenqal qrqllqkhak eivnlqmged wddslqskeq ieasllskhe asmrrekama
      241 ysfthqqtwk nasrsmnalf mdpnnlswgw swlerwmaar pwegrgmaek eqnndqssvk
      301 sgrssfggdi skayaryqln ldkqslkasq kpsrtsslqs pstpkpvsmp trklkspspr
      361 ssvvapdddm rstvsvlser nrrhtiggss vlddeslass pslpsymvpt qsarlktrlq
      421 splgleangt tpekgpilst kkrlsyppsp arprrhsgpp kvdsgsdtnt evaavngdgn
//
LOCUS       XP_040942074             726 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942074
VERSION     XP_040942074.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086140.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..726
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X1"
                     /calculated_mol_wt=80723
     Region          <46..>126
                     /region_name="Zn_finger_prot"
                     /note="Putative zinc finger protein; pfam19242"
                     /db_xref="CDD:437074"
     Region          374..609
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(378..380,404,433,461,503,533,566,568,591..592)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(433,464..465,503,505,532..533,535..536,567..568,592)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(464,505,533,535)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(465,503,532,536,567..568)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..726
                     /gene="LOC107903715"
                     /coded_by="XM_041086140.1:171..2351"
                     /db_xref="GeneID:107903715"
ORIGIN      
        1 mddcpkdica vtdsstegvp asqppldpng ttqrspeelv araiapvkre flrpppssrt
       61 tqnnpasdtn vkqpqanvvq ekkskrqlkr errqeqnspl nlcpeiaktg dvnacsykdk
      121 crfshdieaf maqkpadleg dcpfikadap cpyglacrfa gthkdnapia tsnllkksse
      181 vnglskdvqk llwknkmrft kadavvkslg lagpnwkvkk lvdkeedevg ldgshaadet
      241 nckkvlddsv dcsecpstfp aavnaeeace tdelrplkka kllvdekcsd egedatvlen
      301 dneknsaete ladnvlaepd rspkicnlkd atvlekynek ksaeteladd vhaepdkslk
      361 ihprekmlid freklylapl ttvgnlpfrr vcktlgadvt cgemamctnl lqgqasewal
      421 lrrhssedlf gvqicgaypd tvartvelie kectvdfidi nmgcpidivv dkgagsfllt
      481 kplrmkgiiq aasgtvdkpi tvkvrtgyfg gknridslia digswgatav tihgrsrqqr
      541 yskladwdyi yqcarkapst lqvlgngdif syldwnnrkt dspelstcmi argalikpwl
      601 fteikeqrhw dissqerlni lkeyvrfgle hwgsdkkgve ttrhfvlewl syacryipvg
      661 lldvipqrln wrppsyygrd dletlmasds aadwirisem llgkvpdgft fapkhksnay
      721 draeng
//
LOCUS       XP_040942075             702 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942075
VERSION     XP_040942075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086141.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..702
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X2"
                     /calculated_mol_wt=78165
     Region          <46..>126
                     /region_name="Zn_finger_prot"
                     /note="Putative zinc finger protein; pfam19242"
                     /db_xref="CDD:437074"
     Region          350..585
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(354..356,380,409,437,479,509,542,544,567..568)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(409,440..441,479,481,508..509,511..512,543..544,568)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(440,481,509,511)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(441,479,508,512,543..544)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..702
                     /gene="LOC107903715"
                     /coded_by="XM_041086141.1:171..2279"
                     /db_xref="GeneID:107903715"
ORIGIN      
        1 mddcpkdica vtdsstegvp asqppldpng ttqrspeelv araiapvkre flrpppssrt
       61 tqnnpasdtn vkqpqanvvq ekkskrqlkr errqeqnspl nlcpeiaktg dvnacsykdk
      121 crfshdieaf maqkpadleg dcpfikadap cpyglacrfa gthkdnapia tsnllkksse
      181 vnglskdvqk llwknkmrft kadavvkslg lagpnwkvkk lvdkeedevg ldgshaadet
      241 nckkvlddsv dcsecpstfp aavnaeeace tdelrplkka kllvdekcsd egeepdrspk
      301 icnlkdatvl ekynekksae teladdvhae pdkslkihpr ekmlidfrek lylaplttvg
      361 nlpfrrvckt lgadvtcgem amctnllqgq asewallrrh ssedlfgvqi cgaypdtvar
      421 tveliekect vdfidinmgc pidivvdkga gsflltkplr mkgiiqaasg tvdkpitvkv
      481 rtgyfggknr idsliadigs wgatavtihg rsrqqryskl adwdyiyqca rkapstlqvl
      541 gngdifsyld wnnrktdspe lstcmiarga likpwlftei keqrhwdiss qerlnilkey
      601 vrfglehwgs dkkgvettrh fvlewlsyac ryipvglldv ipqrlnwrpp syygrddlet
      661 lmasdsaadw irisemllgk vpdgftfapk hksnaydrae ng
//
LOCUS       XP_040942076             602 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040942076
VERSION     XP_040942076.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086142.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..602
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X3"
                     /calculated_mol_wt=66117
     Region          <46..>126
                     /region_name="Zn_finger_prot"
                     /note="Putative zinc finger protein; pfam19242"
                     /db_xref="CDD:437074"
     Region          374..597
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(378..380,404,433,461,503,533,566,568,591..592)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(433,464..465,503,505,532..533,535..536,567..568,592)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(464,505,533,535)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(465,503,532,536,567..568)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..602
                     /gene="LOC107903715"
                     /coded_by="XM_041086142.1:171..1979"
                     /db_xref="GeneID:107903715"
ORIGIN      
        1 mddcpkdica vtdsstegvp asqppldpng ttqrspeelv araiapvkre flrpppssrt
       61 tqnnpasdtn vkqpqanvvq ekkskrqlkr errqeqnspl nlcpeiaktg dvnacsykdk
      121 crfshdieaf maqkpadleg dcpfikadap cpyglacrfa gthkdnapia tsnllkksse
      181 vnglskdvqk llwknkmrft kadavvkslg lagpnwkvkk lvdkeedevg ldgshaadet
      241 nckkvlddsv dcsecpstfp aavnaeeace tdelrplkka kllvdekcsd egedatvlen
      301 dneknsaete ladnvlaepd rspkicnlkd atvlekynek ksaeteladd vhaepdkslk
      361 ihprekmlid freklylapl ttvgnlpfrr vcktlgadvt cgemamctnl lqgqasewal
      421 lrrhssedlf gvqicgaypd tvartvelie kectvdfidi nmgcpidivv dkgagsfllt
      481 kplrmkgiiq aasgtvdkpi tvkvrtgyfg gknridslia digswgatav tihgrsrqqr
      541 yskladwdyi yqcarkapst lqvlgngdif syldwnnrkt dspelstcmi argaliknfs
      601 ls
//
LOCUS       XP_016685350             567 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_016685350
VERSION     XP_016685350.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829861.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685350.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..567
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61233
     Region          <79..>213
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          419..468
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          419..468
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(422..423,425..427,429..434,436..438)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Region          <428..>525
                     /region_name="MAD"
                     /note="Mitotic checkpoint protein; pfam05557"
                     /db_xref="CDD:461677"
     Site            order(437,440..441,444..445,447..448,451..452,454..455,
                     458..459,461..462,465..466,468)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     CDS             1..567
                     /gene="LOC107903717"
                     /coded_by="XM_016829861.2:525..2228"
                     /db_xref="GeneID:107903717"
ORIGIN      
        1 mgdgeegntd vmqriqssfg tssssipkqp lsmnhleipq lnpnqirgaa rhfshfgqnf
       61 nggvaagtgd gatnkrvgip pshpnqippi spysqipmsr psnqqmgsqs fhsgpthsrs
      121 lsqpssffsl dslpplspsp frdsssmavp dqvstdvsmd erdaaashsl lppspfskan
      181 sprlgeslpp rkshrrsssd ipfgfntimq ssppliplrg sskpaqlvkk etsdgngegm
      241 gerksegevv ddlfsaymnl dnmdalnpcd gknnngnenh edldsrasgt ktngvdssdn
      301 eaessvnesg nssrggmnst ekregnkraa gadiapsgrh yrsvsmdsfi gklnfgdesp
      361 klppspgnrl gqlsprnsid gnsaafslef gngefteael kkimanekla eiamtdpkra
      421 krilanrqsa arskerkmry iselehkvqt lqteattlsa qltllqrdsv gltnqnnelk
      481 frlqameqqa qlrdalneal taevqrlkla tqqlggdsdp skgmvsepls vnqqmfqlni
      541 shqmqkqspp qpqqqngntt aktelnq
//
LOCUS       XP_016674567             519 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-9 [Gossypium hirsutum].
ACCESSION   XP_016674567
VERSION     XP_016674567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..519
                     /product="importin subunit alpha-9"
                     /calculated_mol_wt=56003
     Region          9..519
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          121..154
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(149,153,186,190,194,228,232,236)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          162..197
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          203..237
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          347..372
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          380..419
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..519
                     /gene="LOC107893934"
                     /coded_by="XM_016819078.2:390..1949"
                     /db_xref="GeneID:107893934"
ORIGIN      
        1 maddspashr rdpikssvgn vaaqrrrqna vtvgkerres lvrakrlcrv gpsgdgdvpg
       61 eendmvtdee gflldaqtss avedlksaia yqgkgamqkr vnalrelrrl lsksefppvk
      121 aalkagaipl lvqclsfgsp deqlleaawc ltniaagkpe etkallpalp llishlgeks
      181 slpvaeqcaw algnvagege elrnvllsqg alpplarmml pnkgstvrta awalsnlikg
      241 pdpkaateli kvdvlldail rhlrksdeel atevawvvvy lsalsnfatg vlvksdaill
      301 lverlatsns lqllipvlrs lgnlvagdsh ttstvlipgh eitdgvikvl vkclksdhrv
      361 lkkeaswvls niaagsiehk rliysseavp lllrllstap fdirkevayv lgnlcvtptg
      421 gdgkpnliee hlvslvqrgc lsgfidlvrs adieaarvgl qfmelvlrgm pngdgpklve
      481 qedgidamer yqfhenedlr nmanglvdky fgenygide
//
LOCUS       XP_040942077             620 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat protein SKIP35 [Gossypium hirsutum].
ACCESSION   XP_040942077
VERSION     XP_040942077.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086143.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..620
                     /product="ankyrin repeat protein SKIP35"
                     /calculated_mol_wt=67396
     Region          <329..>440
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          334..360
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(336..337,340..342,344..345,349,352,360,362,364,
                     368..369,372..374,376..377,381,384,390,392,396..397,
                     400..402,404..405,409,412)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          362..390
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..620
                     /gene="LOC107894604"
                     /coded_by="XM_041086143.1:1074..2936"
                     /db_xref="GeneID:107894604"
ORIGIN      
        1 mekgsefvvg senmhleepw ftgmdteete mgqpnseiqg frlekgeasn mvfsteaplv
       61 ikesptsgsc scslkkikst vapkgsefcq kdksghdkkl srqyrielgq lfqgavsshd
      121 welaeslils adpqtlndal cvtldaiwfl stqqelygit dlikkiiang aydftraalr
      181 tsflascvsa cqsrtmslad tvtvmaqrlh erlqechgde vlkaeagakv qkftewalkc
      241 igshsrcqgs ndrvnhcsai eiqlqltafk tfldlagnql tgkdfteafd aacfpltlfs
      301 ssfdagwasg isatviqgll dmlveggadn vnqcfleasr fgstelvril lqiaqrnsld
      361 vdvdlalgfa shyckigtme clveegnama flgplmraae rgcmqvvqwf vkrgcrdmel
      421 claltaatss sqvgvaayll phvpkhvlta lsieilkaag ersggsldgv afllhsdflg
      481 daaatyavad siaksddeav apelrafvqe hwseaafldg lkqgqqhymk lmrilkrges
      541 piclrdlpap lrvviaympl yrecvevggr llsqrlrgql veavrmlggg sleevsqage
      601 llatlehhlp pflvrapsvg
//
LOCUS       XP_040942078             620 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat protein SKIP35 [Gossypium hirsutum].
ACCESSION   XP_040942078
VERSION     XP_040942078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086144.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..620
                     /product="ankyrin repeat protein SKIP35"
                     /calculated_mol_wt=67396
     Region          <329..>440
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          334..360
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(336..337,340..342,344..345,349,352,360,362,364,
                     368..369,372..374,376..377,381,384,390,392,396..397,
                     400..402,404..405,409,412)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          362..390
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..620
                     /gene="LOC107894604"
                     /coded_by="XM_041086144.1:515..2377"
                     /db_xref="GeneID:107894604"
ORIGIN      
        1 mekgsefvvg senmhleepw ftgmdteete mgqpnseiqg frlekgeasn mvfsteaplv
       61 ikesptsgsc scslkkikst vapkgsefcq kdksghdkkl srqyrielgq lfqgavsshd
      121 welaeslils adpqtlndal cvtldaiwfl stqqelygit dlikkiiang aydftraalr
      181 tsflascvsa cqsrtmslad tvtvmaqrlh erlqechgde vlkaeagakv qkftewalkc
      241 igshsrcqgs ndrvnhcsai eiqlqltafk tfldlagnql tgkdfteafd aacfpltlfs
      301 ssfdagwasg isatviqgll dmlveggadn vnqcfleasr fgstelvril lqiaqrnsld
      361 vdvdlalgfa shyckigtme clveegnama flgplmraae rgcmqvvqwf vkrgcrdmel
      421 claltaatss sqvgvaayll phvpkhvlta lsieilkaag ersggsldgv afllhsdflg
      481 daaatyavad siaksddeav apelrafvqe hwseaafldg lkqgqqhymk lmrilkrges
      541 piclrdlpap lrvviaympl yrecvevggr llsqrlrgql veavrmlggg sleevsqage
      601 llatlehhlp pflvrapsvg
//
LOCUS       XP_040942079             620 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat protein SKIP35 [Gossypium hirsutum].
ACCESSION   XP_040942079
VERSION     XP_040942079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086145.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..620
                     /product="ankyrin repeat protein SKIP35"
                     /calculated_mol_wt=67396
     Region          <329..>440
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          334..360
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(336..337,340..342,344..345,349,352,360,362,364,
                     368..369,372..374,376..377,381,384,390,392,396..397,
                     400..402,404..405,409,412)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          362..390
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..620
                     /gene="LOC107894604"
                     /coded_by="XM_041086145.1:398..2260"
                     /db_xref="GeneID:107894604"
ORIGIN      
        1 mekgsefvvg senmhleepw ftgmdteete mgqpnseiqg frlekgeasn mvfsteaplv
       61 ikesptsgsc scslkkikst vapkgsefcq kdksghdkkl srqyrielgq lfqgavsshd
      121 welaeslils adpqtlndal cvtldaiwfl stqqelygit dlikkiiang aydftraalr
      181 tsflascvsa cqsrtmslad tvtvmaqrlh erlqechgde vlkaeagakv qkftewalkc
      241 igshsrcqgs ndrvnhcsai eiqlqltafk tfldlagnql tgkdfteafd aacfpltlfs
      301 ssfdagwasg isatviqgll dmlveggadn vnqcfleasr fgstelvril lqiaqrnsld
      361 vdvdlalgfa shyckigtme clveegnama flgplmraae rgcmqvvqwf vkrgcrdmel
      421 claltaatss sqvgvaayll phvpkhvlta lsieilkaag ersggsldgv afllhsdflg
      481 daaatyavad siaksddeav apelrafvqe hwseaafldg lkqgqqhymk lmrilkrges
      541 piclrdlpap lrvviaympl yrecvevggr llsqrlrgql veavrmlggg sleevsqage
      601 llatlehhlp pflvrapsvg
//
LOCUS       XP_016753919            1192 aa            linear   PLN 06-AUG-2024
DEFINITION  putative acyl-activating enzyme 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016753919
VERSION     XP_016753919.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016898430.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016753919.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1192
                     /product="putative acyl-activating enzyme 19 isoform X1"
                     /calculated_mol_wt=131226
     Region          141..618
                     /region_name="A_NRPS"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); cd05930"
                     /db_xref="CDD:341253"
     Site            order(253,256..261,263..264)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341253"
     Site            order(256..257,377..378,399..404,432,503,515,518,612)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341253"
     Region          642..694
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          827..1049
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          890..923
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          930..965
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          971..1007
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1015..1072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1034..>1192
                     /region_name="PQQ_DH_like"
                     /note="PQQ-dependent dehydrogenases and related proteins;
                     cl11493"
                     /db_xref="CDD:472205"
     CDS             1..1192
                     /gene="LOC107962164"
                     /coded_by="XM_016898430.2:6..3584"
                     /db_xref="GeneID:107962164"
ORIGIN      
        1 mafpsgeqet lqrkhcclih efyraasksp dkiaiihasp snpsanevri drelinsgnp
       61 pvykgdqcft fanllasvey lsfricsvld gaddrylikp qtsgdnsngk hpqsvqmsea
      121 sldfirgvcq htdlenmyvp kivalfmpps veyvvsvlsv lkcgeaflpv dpawprdril
      181 svldsldaal vvtcgsslvk sgselvdqld wlleccscpi mrfsmeasie shksqsspaw
      241 pcenerkrlf cylmytsgst gkpkgvcgte egllnrflwm qelypmqgee lllfktsisf
      301 vdhlqeflia altactlvip pftelkqnvf siidflqays isrltavpsl mrmilpamqs
      361 qhdirisssl kllvlsgevl plslwnvlsn llpktsilnl ygstevsgdc lyfdckglps
      421 ilemekltsv piglpiskcs tvligetgns nvgeicirgv cvstgylfen aiiplnnakl
      481 hqnsickcst vecggqiyfr tgdfahllss gdlvflgrkd rtikvngqri aleeledtlr
      541 ghndvvdasv isqkdqgdne fivafislge kvksaeivkt sirnsminkf psvmvpsrfv
      601 fleslpvsas gkvdyaqltd sifsishvkd eigdigasnl mqiikkaicd almvedvsdd
      661 ddffmiggns itaahvshnl gidmrllytf stpaklvisl leknvlnntk fgvndipest
      721 mepdkvnqys fpesetpdpl gsklqghlsl mphernddqa gqskrlkvdl nkyyvlepid
      781 lfcgypwnsa pmrnsfsfsr cnkvmheggq vvngswqaql vevsrtrtgy mqelwkvnme
      841 acvdasplvv fndsdiylfv gshsykflci naksgfiqwe trlqgrvegs aaivadfsqv
      901 vvgcydgniy flellngnic wtfhtsgevk cqpivhahrg liwcgshdhn lyaldyrnkc
      961 cvytlpcggs ifgspaidet hgalyaasts grvtaisike mpfctlwlhe levpvfgsls
     1021 vssphgyvic clvdghvval dssgcivwkw ktggpifaga cissalpsqv licsrngsvy
     1081 sfemekgell wevnvgdpit asayvdenlq lvsndpsisv drlvcvctss ggiflfrinl
     1141 degtgdhrkk ylvqkfatlk legdvfsspv iiggrifvgc rddylhciav et
//
LOCUS       XP_016753920            1185 aa            linear   PLN 06-AUG-2024
DEFINITION  putative acyl-activating enzyme 19 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016753920
VERSION     XP_016753920.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016898431.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016753920.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1185
                     /product="putative acyl-activating enzyme 19 isoform X2"
                     /calculated_mol_wt=130451
     Region          141..618
                     /region_name="A_NRPS"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); cd05930"
                     /db_xref="CDD:341253"
     Site            order(253,256..261,263..264)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341253"
     Site            order(256..257,377..378,399..404,432,503,515,518,612)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341253"
     Region          642..694
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          827..1049
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          890..923
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          930..965
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          971..1007
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1015..1072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1034..>1185
                     /region_name="PQQ_DH_like"
                     /note="PQQ-dependent dehydrogenases and related proteins;
                     cl11493"
                     /db_xref="CDD:472205"
     CDS             1..1185
                     /gene="LOC107962164"
                     /coded_by="XM_016898431.2:6..3563"
                     /db_xref="GeneID:107962164"
ORIGIN      
        1 mafpsgeqet lqrkhcclih efyraasksp dkiaiihasp snpsanevri drelinsgnp
       61 pvykgdqcft fanllasvey lsfricsvld gaddrylikp qtsgdnsngk hpqsvqmsea
      121 sldfirgvcq htdlenmyvp kivalfmpps veyvvsvlsv lkcgeaflpv dpawprdril
      181 svldsldaal vvtcgsslvk sgselvdqld wlleccscpi mrfsmeasie shksqsspaw
      241 pcenerkrlf cylmytsgst gkpkgvcgte egllnrflwm qelypmqgee lllfktsisf
      301 vdhlqeflia altactlvip pftelkqnvf siidflqays isrltavpsl mrmilpamqs
      361 qhdirisssl kllvlsgevl plslwnvlsn llpktsilnl ygstevsgdc lyfdckglps
      421 ilemekltsv piglpiskcs tvligetgns nvgeicirgv cvstgylfen aiiplnnakl
      481 hqnsickcst vecggqiyfr tgdfahllss gdlvflgrkd rtikvngqri aleeledtlr
      541 ghndvvdasv isqkdqgdne fivafislge kvksaeivkt sirnsminkf psvmvpsrfv
      601 fleslpvsas gkvdyaqltd sifsishvkd eigdigasnl mqiikkaicd almvedvsdd
      661 ddffmiggns itaahvshnl gidmrllytf stpaklvisl leknvlnntk fgvndipest
      721 mepdkvnqys fpesetpdpl gsklqghlsl mphernddqa gqskrlkvdl nkyyvlepid
      781 lfcgypwnsa pmrnsfsfsr cnkvmheggq vvngswqaql vevsrtrtgy mqelwkvnme
      841 acvdasplvv fndsdiylfv gshsykflci naksgfiqwe trlqgrvegs aaivadfsqv
      901 vvgcydgniy flellngnic wtfhtsgevk cqpivhahrg liwcgshdhn lyaldyrnkc
      961 cvytlpcggs ifgspaidet hgalyaasts grvtaisike mpfctlwlhe levpvfgsls
     1021 vssphgyvic clvdghvval dssgcivwkw ktggpifaga cissalpsqv licsrngsvy
     1081 sfemekgell wevnvgdpit asayvdenlq lvsndpsisv dssggiflfr inldegtgdh
     1141 rkkylvqkfa tlklegdvfs spviiggrif vgcrddylhc iavet
//
LOCUS       XP_016753921            1182 aa            linear   PLN 06-AUG-2024
DEFINITION  putative acyl-activating enzyme 19 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016753921
VERSION     XP_016753921.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016898432.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016753921.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1182
                     /product="putative acyl-activating enzyme 19 isoform X3"
                     /calculated_mol_wt=129967
     Region          141..608
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(253,256..261,263..264)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(256,360,367,389..394,493,505,508,519,602)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(256,286..287,337,339..340,343,360,367,389..394,493,
                     505,508,516..519,583)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(286,339..340,343,360,516..518,577,583)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Region          632..684
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          817..1039
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          880..913
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          920..955
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          961..997
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1005..1062
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1024..>1182
                     /region_name="PQQ_DH_like"
                     /note="PQQ-dependent dehydrogenases and related proteins;
                     cl11493"
                     /db_xref="CDD:472205"
     CDS             1..1182
                     /gene="LOC107962164"
                     /coded_by="XM_016898432.2:6..3554"
                     /db_xref="GeneID:107962164"
ORIGIN      
        1 mafpsgeqet lqrkhcclih efyraasksp dkiaiihasp snpsanevri drelinsgnp
       61 pvykgdqcft fanllasvey lsfricsvld gaddrylikp qtsgdnsngk hpqsvqmsea
      121 sldfirgvcq htdlenmyvp kivalfmpps veyvvsvlsv lkcgeaflpv dpawprdril
      181 svldsldaal vvtcgsslvk sgselvdqld wlleccscpi mrfsmeasie shksqsspaw
      241 pcenerkrlf cylmytsgst gkpkgvcgte eelypmqgee lllfktsisf vdhlqeflia
      301 altactlvip pftelkqnvf siidflqays isrltavpsl mrmilpamqs qhdirisssl
      361 kllvlsgevl plslwnvlsn llpktsilnl ygstevsgdc lyfdckglps ilemekltsv
      421 piglpiskcs tvligetgns nvgeicirgv cvstgylfen aiiplnnakl hqnsickcst
      481 vecggqiyfr tgdfahllss gdlvflgrkd rtikvngqri aleeledtlr ghndvvdasv
      541 isqkdqgdne fivafislge kvksaeivkt sirnsminkf psvmvpsrfv fleslpvsas
      601 gkvdyaqltd sifsishvkd eigdigasnl mqiikkaicd almvedvsdd ddffmiggns
      661 itaahvshnl gidmrllytf stpaklvisl leknvlnntk fgvndipest mepdkvnqys
      721 fpesetpdpl gsklqghlsl mphernddqa gqskrlkvdl nkyyvlepid lfcgypwnsa
      781 pmrnsfsfsr cnkvmheggq vvngswqaql vevsrtrtgy mqelwkvnme acvdasplvv
      841 fndsdiylfv gshsykflci naksgfiqwe trlqgrvegs aaivadfsqv vvgcydgniy
      901 flellngnic wtfhtsgevk cqpivhahrg liwcgshdhn lyaldyrnkc cvytlpcggs
      961 ifgspaidet hgalyaasts grvtaisike mpfctlwlhe levpvfgsls vssphgyvic
     1021 clvdghvval dssgcivwkw ktggpifaga cissalpsqv licsrngsvy sfemekgell
     1081 wevnvgdpit asayvdenlq lvsndpsisv drlvcvctss ggiflfrinl degtgdhrkk
     1141 ylvqkfatlk legdvfsspv iiggrifvgc rddylhciav et
//
LOCUS       XP_016705413             508 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific phospholipase C3 [Gossypium hirsutum].
ACCESSION   XP_016705413
VERSION     XP_016705413.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016849924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016705413.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..508
                     /product="non-specific phospholipase C3"
                     /calculated_mol_wt=56829
     Region          13..376
                     /region_name="Phosphoesterase"
                     /note="Phosphoesterase family; pfam04185"
                     /db_xref="CDD:309350"
     Site            order(22,154,260,295..296)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(22,154,260,296)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     CDS             1..508
                     /gene="LOC107920295"
                     /coded_by="XM_016849924.2:254..1780"
                     /db_xref="GeneID:107920295"
ORIGIN      
        1 mavetssatp spvktvvvlv qenrsfdhml gwfktinpei dgvtgsesnp istsdpnstq
       61 itfkdtagyv dpdpdhsfqa iyeqvsgktw dtsnpdpnpg ikmngfvqna erttpglset
      121 vmngfkpeav pvfkqlvtef avcdrwfasl pastqpnrly vhsatshgam snntqqlieg
      181 fpqktifesl eengysfgiy yqsfpstlfy rklrhlkyvd nfhqydlsfk rhckdgklpn
      241 yvviepryfd iltaaanddh pshdvsegqk lvkeiyealr sspqwneilf lviydehggf
      301 ydhvptptgv pspddivgpe pynfkfdrlg crvpaimvsp wiepgtvlhr psgpdptsef
      361 ehssiaatlk kifnlkeflt krdawagsfd ivvnrstprt dcpeklaepv kmrdsdaket
      421 aklsdfqeel vqaaaalkgd pfnlvenmtv ssglkyveda fkkfyddgqk akeinevedt
      481 vsadastrrt tasktfmqkv fsclvcdr
//
LOCUS       XP_016674100             343 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674100
VERSION     XP_016674100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818611.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..343
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37417
     Region          116..>192
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..343
                     /gene="LOC107893576"
                     /coded_by="XM_016818611.2:262..1293"
                     /db_xref="GeneID:107893576"
ORIGIN      
        1 mvaislyrgn lhrapevswr wlmptpkisl kdfksllhrr dralsrlrss sssnpnpnsv
       61 lkhqiqspvs ceppiepklk aklepepseg lktgpplqev kvdivggsdg gdclvksede
      121 qtekdinlqv deklpeeakt nvevsdkind fngkekrkrd veeklqvlna kkhslvqvlk
      181 qilnaeeelk rrngtqgtvn rpavplqvet tndsgsmtrl vtprmgldan lagendgvea
      241 ddvsnhnvhs rhvfrmssts pssesplrrp tyiqhnvvsh psrtsmgvtg spsrfaptgn
      301 qghpgnpptv svsgtnfvas spspaasggt svlreawqps pwn
//
LOCUS       XP_016674102             209 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein RZ1A [Gossypium hirsutum].
ACCESSION   XP_016674102
VERSION     XP_016674102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818613.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..209
                     /product="glycine-rich RNA-binding protein RZ1A"
                     /calculated_mol_wt=22351
     Region          8..83
                     /region_name="RRM2_NsCP33_like"
                     /note="RNA recognition motif 2 (RRM2) found in Nicotiana
                     sylvestris chloroplastic 33 kDa ribonucleoprotein (NsCP33)
                     and similar proteins; cd21608"
                     /db_xref="CDD:410187"
     Region          <107..146
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          124..139
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     CDS             1..209
                     /gene="LOC107893577"
                     /coded_by="XM_016818613.2:166..795"
                     /db_xref="GeneID:107893577"
ORIGIN      
        1 msedieyrcf ignlswattd rglkdafekf gnlldakvav dkfsgrsrgf gfvsfddkaa
       61 meeaieamng mdldgrnitv dkakphqgsg rdsdgdrsrd hgrdhdrdrn rgydsgrgsh
      121 ggecfkcgkp ghfarecpsd ggkyggrvdr ygggggssng rygpdrngdr sggrsrdggs
      181 rggagaggdr ynrdrsgpye rhgtgghrs
//
LOCUS       XP_016674101             209 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein RZ1A [Gossypium hirsutum].
ACCESSION   XP_016674101
VERSION     XP_016674101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818612.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..209
                     /product="glycine-rich RNA-binding protein RZ1A"
                     /calculated_mol_wt=22351
     Region          8..83
                     /region_name="RRM2_NsCP33_like"
                     /note="RNA recognition motif 2 (RRM2) found in Nicotiana
                     sylvestris chloroplastic 33 kDa ribonucleoprotein (NsCP33)
                     and similar proteins; cd21608"
                     /db_xref="CDD:410187"
     Region          <107..146
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          124..139
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     CDS             1..209
                     /gene="LOC107893577"
                     /coded_by="XM_016818612.2:177..806"
                     /db_xref="GeneID:107893577"
ORIGIN      
        1 msedieyrcf ignlswattd rglkdafekf gnlldakvav dkfsgrsrgf gfvsfddkaa
       61 meeaieamng mdldgrnitv dkakphqgsg rdsdgdrsrd hgrdhdrdrn rgydsgrgsh
      121 ggecfkcgkp ghfarecpsd ggkyggrvdr ygggggssng rygpdrngdr sggrsrdggs
      181 rggagaggdr ynrdrsgpye rhgtgghrs
//
LOCUS       XP_016674531             209 aa            linear   PLN 06-AUG-2024
DEFINITION  PRA1 family protein A1 [Gossypium hirsutum].
ACCESSION   XP_016674531
VERSION     XP_016674531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..209
                     /product="PRA1 family protein A1"
                     /calculated_mol_wt=23849
     Region          19..192
                     /region_name="PRA1"
                     /note="PRA1 family protein; pfam03208"
                     /db_xref="CDD:460846"
     CDS             1..209
                     /gene="LOC107893899"
                     /coded_by="XM_016819042.2:155..784"
                     /db_xref="GeneID:107893899"
ORIGIN      
        1 mdwgnvtaed liealrevdw sspprplsef fsrftvprsy akwnsrlkcn lynyrtnyfi
       61 livlivglgf lrrpvavlaa iltalsiafl ndsfagtfse kvtrivrqfs phlaakmrpp
      121 ltpvirgrps skrtihicgr pcwvfvfifs svsfilwyvs cglstvlwal aiallatvlh
      181 asfrtpnlka rlntfreefr avwrnysel
//
LOCUS       XP_016674532            1106 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein MRL1, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674532
VERSION     XP_016674532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1106
                     /product="pentatricopeptide repeat-containing protein
                     MRL1, chloroplastic isoform X1"
                     /calculated_mol_wt=121340
     Region          18..1106
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          423..445
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          485..512
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          521..547
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          553..582
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          588..615
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          625..653
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          660..689
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          699..724
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          732..759
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          765..794
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          800..825
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1106
                     /gene="LOC107893900"
                     /coded_by="XM_016819043.2:159..3479"
                     /db_xref="GeneID:107893900"
ORIGIN      
        1 mdsnliflsp kfqtpnflps ypfsssttrp lisrqflgft hslwppggas slrrkrknlt
       61 flrlqpprfv srvsidsnlv fvligvtals afslafynqf frksqtlkkv sgssrsalrq
      121 qrqgkdvviq tadhqileag dlqrdtfake nggltehmke vndaseskev flqetavvng
      181 dstlskases ngadflafnt ndsdvleesg ttvlplqptv llesgagqpl tfatqrsglh
      241 leervnefea dyprlavepk ssassvlved avvlvgedkv rnydifresg reelhtfyea
      301 dhlvaksssn ltlrpvsshv lssnsnkfss lklkpnseln kdalsaknsl qtadmvegkv
      361 tqanfqggfs hkrkdvgrgm esprdkgkkh liqekdtkla qfpfpngela ndnlhpeeyl
      421 syyncllrcg rlsdcvdlle dmeqkglldm dkvyhakffk icskqkavke afrftklian
      481 ptlstfnmlm svcgcskdse gafqvlrlvq eagfqadcil yttlistcak sgkvdtmfev
      541 fhemvnsgve pnvntygali dgcaragqvp kafgaygimr sknvkpdrvv fnalitacgq
      601 sgavdrafdv laemmaetqp idpdhitvga likacsnagq verarevykm mhkfnirgtp
      661 evytiavncc sqtgewefac gvyndmkkkg iapdevfisa lidvaghagk ldaafellqe
      721 aknhginsgi vsysslmgac snarnwqkal elyenikalk lkltvstvna litslceanq
      781 lpkamevlse meesglspnt itysillvas ernddlevgl mllskarddg iapnlvtsrc
      841 iigmclrrfv kacavgepvl sfnsgrphie nkwtsvaltv yretidagtv ptmevvskil
      901 gclqlprdds lrsrlvenle viadpsrsss lgslidgfge ydprsfslle eaasfgivpc
      961 vsfkespivv darelqinta evylltilkg lkhrlaagak lpsisillpl ekaqiltsgg
     1021 eksinvagrm gqaiaallrr iklpyqgnes ygkiringla lrkwfqpkla spftgkpgew
     1081 nasqlrlgkg ishqqrnirt gnlslh
//
LOCUS       XP_016674533            1073 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein MRL1, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674533
VERSION     XP_016674533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..1073
                     /product="pentatricopeptide repeat-containing protein
                     MRL1, chloroplastic isoform X2"
                     /calculated_mol_wt=117865
     Region          18..1073
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          390..412
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          452..479
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          488..514
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          520..549
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          555..582
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          592..620
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          627..656
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          666..691
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          699..726
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          732..761
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          767..792
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1073
                     /gene="LOC107893900"
                     /coded_by="XM_016819044.2:85..3306"
                     /db_xref="GeneID:107893900"
ORIGIN      
        1 mdsnliflsp kfqtpnflps ypfsssttrp lisrqflgft hslwppggas slrrkrknlt
       61 flrlqpprfv srvsidsnlv fvligvtals afslafynqf frksqtlkkv sgssrsalrq
      121 qrqgkdvviq tadhqileag dlqrdtfake nggltehmke vndaseskev flqetavvng
      181 dstlskases ngagqpltfa tqrsglhlee rvnefeadyp rlavepkssa ssvlvedavv
      241 lvgedkvrny difresgree lhtfyeadhl vaksssnltl rpvsshvlss nsnkfsslkl
      301 kpnselnkda lsaknslqta dmvegkvtqa nfqggfshkr kdvgrgmesp rdkgkkhliq
      361 ekdtklaqfp fpngelandn lhpeeylsyy ncllrcgrls dcvdlledme qkglldmdkv
      421 yhakffkics kqkavkeafr ftklianptl stfnmlmsvc gcskdsegaf qvlrlvqeag
      481 fqadcilytt listcaksgk vdtmfevfhe mvnsgvepnv ntygalidgc aragqvpkaf
      541 gaygimrskn vkpdrvvfna litacgqsga vdrafdvlae mmaetqpidp dhitvgalik
      601 acsnagqver arevykmmhk fnirgtpevy tiavnccsqt gewefacgvy ndmkkkgiap
      661 devfisalid vaghagklda afellqeakn hginsgivsy sslmgacsna rnwqkalely
      721 enikalklkl tvstvnalit slceanqlpk amevlsemee sglspntity sillvasern
      781 ddlevglmll skarddgiap nlvtsrciig mclrrfvkac avgepvlsfn sgrphienkw
      841 tsvaltvyre tidagtvptm evvskilgcl qlprddslrs rlvenlevia dpsrssslgs
      901 lidgfgeydp rsfslleeaa sfgivpcvsf kespivvdar elqintaevy lltilkglkh
      961 rlaagaklps isillpleka qiltsggeks invagrmgqa iaallrrikl pyqgnesygk
     1021 iringlalrk wfqpklaspf tgkpgewnas qlrlgkgish qqrnirtgnl slh
//
LOCUS       XP_040942081             998 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein MRL1, chloroplastic
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942081
VERSION     XP_040942081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086147.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..998
                     /product="pentatricopeptide repeat-containing protein
                     MRL1, chloroplastic isoform X3"
                     /calculated_mol_wt=109028
     Region          32..998
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          315..337
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          377..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          413..439
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          445..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          480..507
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..545
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          552..581
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          591..616
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          624..651
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          657..686
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          692..717
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..998
                     /gene="LOC107893900"
                     /coded_by="XM_041086147.1:231..3227"
                     /db_xref="GeneID:107893900"
ORIGIN      
        1 mvsgssrsal rqqrqgkdvv iqtadhqile agdlqrdtfa kenggltehm kevndasesk
       61 evflqetavv ngdstlskas esngadflaf ntndsdvlee sgttvlplqp tvllesgagq
      121 pltfatqrsg lhleervnef eadyprlave pkssassvlv edavvlvged kvrnydifre
      181 sgreelhtfy eadhlvakss snltlrpvss hvlssnsnkf sslklkpnse lnkdalsakn
      241 slqtadmveg kvtqanfqgg fshkrkdvgr gmesprdkgk khliqekdtk laqfpfpnge
      301 landnlhpee ylsyyncllr cgrlsdcvdl ledmeqkgll dmdkvyhakf fkicskqkav
      361 keafrftkli anptlstfnm lmsvcgcskd segafqvlrl vqeagfqadc ilyttlistc
      421 aksgkvdtmf evfhemvnsg vepnvntyga lidgcaragq vpkafgaygi mrsknvkpdr
      481 vvfnalitac gqsgavdraf dvlaemmaet qpidpdhitv galikacsna gqverarevy
      541 kmmhkfnirg tpevytiavn ccsqtgewef acgvyndmkk kgiapdevfi salidvagha
      601 gkldaafell qeaknhgins givsysslmg acsnarnwqk alelyenika lklkltvstv
      661 nalitslcea nqlpkamevl semeesglsp ntitysillv asernddlev glmllskard
      721 dgiapnlvts rciigmclrr fvkacavgep vlsfnsgrph ienkwtsval tvyretidag
      781 tvptmevvsk ilgclqlprd dslrsrlven leviadpsrs sslgslidgf geydprsfsl
      841 leeaasfgiv pcvsfkespi vvdarelqin taevylltil kglkhrlaag aklpsisill
      901 plekaqilts ggeksinvag rmgqaiaall rriklpyqgn esygkiring lalrkwfqpk
      961 laspftgkpg ewnasqlrlg kgishqqrni rtgnlslh
//
LOCUS       XP_016675560              94 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR23 [Gossypium hirsutum].
ACCESSION   XP_016675560
VERSION     XP_016675560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..94
                     /product="auxin-responsive protein SAUR23"
                     /calculated_mol_wt=10389
     Region          13..91
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..94
                     /gene="LOC107894896"
                     /coded_by="XM_016820071.2:66..350"
                     /db_xref="GeneID:107894896"
ORIGIN      
        1 msfrlpsivv nakqvlkaqq aqssvpkghi aiyvgeverk ryiipvtfln hpsfvdllnq
       61 aeeefgfnhp mggltipcke dtfidlasrl halt
//
LOCUS       XP_016674534              94 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR23 [Gossypium hirsutum].
ACCESSION   XP_016674534
VERSION     XP_016674534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..94
                     /product="auxin-responsive protein SAUR23"
                     /calculated_mol_wt=10394
     Region          1..89
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..94
                     /gene="LOC107893902"
                     /coded_by="XM_016819045.2:342..626"
                     /db_xref="GeneID:107893902"
ORIGIN      
        1 mgfrlpsvil hakqvlklqs rnqtdvpkgh iavyvgeiqk trfvvpisyl nhpsfvdlln
       61 laeeqfgfnh pmggltipcd edaflhltsq lhgc
//
LOCUS       XP_016675561             103 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR21 [Gossypium hirsutum].
ACCESSION   XP_016675561
VERSION     XP_016675561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820072.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..103
                     /product="auxin-responsive protein SAUR21"
                     /calculated_mol_wt=11553
     Region          1..93
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..103
                     /gene="LOC107894897"
                     /coded_by="XM_016820072.2:133..444"
                     /db_xref="GeneID:107894897"
ORIGIN      
        1 mgfrlpaviq ssrqllkhhs gfsrkqsdvv pkghvavyvg eaqrkrfmvp iaylnhpsfk
       61 ellnraeedf gfdhpmgglt ipckedafin ltsklhtcla hqr
//
LOCUS       XP_016674535             101 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-induced protein 15A [Gossypium hirsutum].
ACCESSION   XP_016674535
VERSION     XP_016674535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..101
                     /product="auxin-induced protein 15A"
                     /calculated_mol_wt=10928
     Region          1..94
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..101
                     /gene="LOC107893903"
                     /coded_by="XM_016819046.2:109..414"
                     /db_xref="GeneID:107893903"
ORIGIN      
        1 mgiqlmglah akqklqrtls gkignaalat snvpkghiav yigegnrkrf vipvsylnhp
       61 lfqdllnrae eefgfnhpmg gltipcseey fislttvlsc s
//
LOCUS       XP_016674537              96 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR22 [Gossypium hirsutum].
ACCESSION   XP_016674537
VERSION     XP_016674537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="auxin-responsive protein SAUR22"
                     /calculated_mol_wt=10683
     Region          1..95
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..96
                     /gene="LOC107893904"
                     /coded_by="XM_016819048.2:101..391"
                     /db_xref="GeneID:107893904"
ORIGIN      
        1 mgvrlpsmis sakqilklqs ritrdkpdvp kghiavyvge tqrkrfvvpi svlnhpsfnd
       61 llkraeeefg fnhpmgglti pcredaflnl tsrlqa
//
LOCUS       XP_016675563              98 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR23 [Gossypium hirsutum].
ACCESSION   XP_016675563
VERSION     XP_016675563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820074.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..98
                     /product="auxin-responsive protein SAUR23"
                     /calculated_mol_wt=10910
     Region          12..96
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..98
                     /gene="LOC107894902"
                     /coded_by="XM_016820074.1:1..297"
                     /db_xref="GeneID:107894902"
ORIGIN      
        1 mavrvprimh akqilrhskm fanqaasdst vvpkgyivvy vgesqkkrfv vpisflnhps
       61 fqkllsiaee efgfnhpmgg ltipcreevf vdltsslh
//
LOCUS       XP_016675345              96 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR21 [Gossypium hirsutum].
ACCESSION   XP_016675345
VERSION     XP_016675345.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819856.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..96
                     /product="auxin-responsive protein SAUR21"
                     /calculated_mol_wt=10602
     Region          <27..89
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional;
                     cl23790"
                     /db_xref="CDD:474056"
     CDS             1..96
                     /gene="LOC107894599"
                     /coded_by="XM_016819856.1:1..291"
                     /db_xref="GeneID:107894599"
ORIGIN      
        1 mgfrlprivs akpslkrfls tletavvpkg hfaiyvgead ekkkfvvpvs llkhpsfqnl
       61 lsqeeeefaf nhpmgaltip cnkeafinlt cnlqss
//
LOCUS       XP_040942083             265 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxisome biogenesis protein 5 [Gossypium hirsutum].
ACCESSION   XP_040942083
VERSION     XP_040942083.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086149.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..265
                     /product="peroxisome biogenesis protein 5"
                     /calculated_mol_wt=29845
     Region          84..>258
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Site            order(188..189,192..193,195,219,222..223,226..227,
                     229..230,253,256..257,260..261,264)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          188..212
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          202..>259
                     /region_name="NrfG"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; COG4235"
                     /db_xref="CDD:443378"
     Region          217..247
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..265
                     /gene="LOC121212742"
                     /coded_by="XM_041086149.1:1..798"
                     /db_xref="GeneID:121212742"
ORIGIN      
        1 milrvfrgpd hwanefgaer lqqesvddqw vnefskvhvd dwaeefgrqv gegalgdsss
       61 dnwansydeg vyvfsdmnpy vghqnplkeg qelfrkglls eavlaleaev mknpenaegw
      121 rllgithaen dddqqvfrrp dhwanefgav rlqqesvddq wvpqrsdasr gvyifsdmnp
      181 yvghqnplke gqelfrkgll reavlaleae vmknpenaeg wrllgithae ndddqqaiaa
      241 mmraqeadpt nlevllalgv shtng
//
LOCUS       XP_040942084             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942084
VERSION     XP_040942084.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086150.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..139
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15708
     CDS             1..139
                     /gene="LOC121212743"
                     /coded_by="XM_041086150.1:156..575"
                     /db_xref="GeneID:121212743"
ORIGIN      
        1 mgvenkggsr plgpdlddrg etprrrnqgh frrsdtregp vigkrwrrac eevpdrarga
       61 gsgrrggmrr kekprfsaak ilaswarffl lfrfglefvn gllilgllfg lscwygprqi
      121 lgftvfdqpl siftkiifl
//
LOCUS       XP_016747342             428 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 [Gossypium hirsutum].
ACCESSION   XP_016747342
VERSION     XP_016747342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891853.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..428
                     /product="UPF0481 protein At3g47200"
                     /calculated_mol_wt=48846
     Region          41..417
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..428
                     /gene="LOC107956109"
                     /coded_by="XM_016891853.1:1..1287"
                     /db_xref="GeneID:107956109"
ORIGIN      
        1 mpaeplnfle ekmkefdsal hevqnqeaqg stppqttkpl iqrvspllld kmadfqkcfe
       61 prlvafgplh hgnpkfqrae qykikfaarf vhvsgtkhdd lfnkvkaqid dlrkcytped
      121 veaydndkla wmlfvdgcav lcvvhcvmeg kfdelntkay llvfaqldlf llenqlpykl
      181 lkiligsakd peiweksitd fvaenlmtni eqkskhvadn kdyahllerl rdklltgkem
      241 ktentkiggi llscggsrkh rktfrsikel kesgihvkps ttnnlkdisf ycnfmgkltm
      301 prlladdsta skflnlvale mcqdfkndse vtsylcfmda lidsaddvke lrdtgmlhny
      361 lgkneevael fkkmsrglvp dqaryemvin dihkycnnpw rgvatkanka grwigkfaic
      421 isrsifhm
//
LOCUS       XP_016745515             159 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EARLY RESPONSIVE TO DEHYDRATION 15 [Gossypium hirsutum].
ACCESSION   XP_016745515
VERSION     XP_016745515.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016890026.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..159
                     /product="protein EARLY RESPONSIVE TO DEHYDRATION 15"
                     /calculated_mol_wt=17886
     CDS             1..159
                     /gene="LOC107954458"
                     /coded_by="XM_016890026.2:1..480"
                     /db_xref="GeneID:107954458"
ORIGIN      
        1 malvaggsst lnpnaplfvp avyrqvedfs pewwklvttt twyrdywisq nqdedgfydn
       61 teddvfdvnd ivdlladpfd fvsdedlqfe efiqsnemet iapplpsngg fekgveslmk
      121 nlslvpsspr fsaepakyve kpaktvnaks grrcihqpr
//
LOCUS       XP_016747343             393 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase [Gossypium hirsutum].
ACCESSION   XP_016747343
VERSION     XP_016747343.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891854.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016747343.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..393
                     /product="polygalacturonase"
                     /calculated_mol_wt=42273
     Region          1..393
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..393
                     /gene="LOC107956111"
                     /coded_by="XM_016891854.2:1..1182"
                     /db_xref="GeneID:107956111"
ORIGIN      
        1 mnlsrpshsi ililffmlai nstsaltkyn vlnfgakpng ktdstkaflm awkaactsad
       61 stiiyvpkgr yllgsmafqg gckspqiifr idgtlvapqd yrvlgkstdl lsfegvngvs
      121 ilggaldakg pslwackash sncpsgattl sftnskniri rsllslnsqm fhivingcen
      181 vnvqgvriiv agnspntdgi hvqlsknvni ikcsiktgdd cisigpgtkn lwveqvtcgp
      241 ghgisigsla kdlkeegvqn itvkktiffg tqnglriksw arpstgfvqg irfmdslmin
      301 vqnpividqn ycphnlncpn qvsgikikdi iyegirgtss tqvaikfdcs lknpctgirl
      361 qninlsylnk paqsscsnvr gktlnlvrpe scl
//
LOCUS       XP_016747344             224 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase [Gossypium hirsutum].
ACCESSION   XP_016747344
VERSION     XP_016747344.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891855.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016747344.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..224
                     /product="polygalacturonase"
                     /calculated_mol_wt=24194
     Region          <3..224
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..224
                     /gene="LOC107956114"
                     /coded_by="XM_016891855.2:1..675"
                     /db_xref="GeneID:107956114"
ORIGIN      
        1 mfhvvingce nvdvqgvrii aagnspntdg ihvqlsknvn iikcsiktgd dcisigpgtk
       61 nlwieqvtcg pghgisigsl akdlkeegvq nvtvrntifl gtqnglriks warpstgfvq
      121 gvrftdslmr nvqnpividq nycphnlncp nqvsgikikd iiyegirgts stqvaikfdc
      181 spknpctgik lqnvnlsyln kpaqsfcsnv rgkalnfvrp escl
//
LOCUS       XP_040942085             393 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase-like [Gossypium hirsutum].
ACCESSION   XP_040942085
VERSION     XP_040942085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086151.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..393
                     /product="polygalacturonase-like"
                     /calculated_mol_wt=42324
     Region          11..393
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..393
                     /gene="LOC107956115"
                     /coded_by="XM_041086151.1:1..1182"
                     /db_xref="GeneID:107956115"
ORIGIN      
        1 mnltrpshai ilflffilai nstsalikyn vlkfgakpng ktdstkaflm aweaacssad
       61 ptmiyvpkgr yllgsmafkg gcksphitir idgtlvapqd crvlgkstdw lsfegvngvs
      121 ilggaldakg pslwackssh sncpsgattl sftnskniri rrllslnsqm fhivingcen
      181 vhvqgvriia agdspntdgi hvqlsknvni ikcsiktgdd cisigpgtkn lwveqvtcgp
      241 ghgvsigsla kdlkeegvqn vtirktifig tqnglriksw arpstgfvqg vrftdslmvn
      301 vqnpividqn ycphnlncpn qvsgikikdi iyegirgtsf tqvaikfdcs sknpctgirl
      361 qnvnlsylnk paqsscsnvr gkalnlvrpe ncl
//
LOCUS       XP_016729287             112 aa            linear   PLN 06-AUG-2024
DEFINITION  putative lipid-binding protein AIR1B [Gossypium hirsutum].
ACCESSION   XP_016729287
VERSION     XP_016729287.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873798.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729287.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="putative lipid-binding protein AIR1B"
                     /calculated_mol_wt=11841
     Region          29..103
                     /region_name="HPS_like"
                     /note="Hydrophobic Protein from Soybean (HPS)-like
                     subfamily; composed of proteins with similarity to HPS, a
                     small hydrophobic protein with unknown function related to
                     cereal-type alpha-amylase inhibitors and lipid transfer
                     proteins. In addition to HPS, members...; cd01958"
                     /db_xref="CDD:238924"
     CDS             1..112
                     /gene="LOC107940370"
                     /coded_by="XM_016873798.2:1..339"
                     /db_xref="GeneID:107940370"
ORIGIN      
        1 maskalatia lllsinllfl smanahnqpq crndalllnv canilnvvdv gigkslkpcc
       61 dlinglvgle ldaclctvlk gnvlglvnvk pplqlnlllt kcgmkrrgyr cn
//
LOCUS       XP_016729286             112 aa            linear   PLN 06-AUG-2024
DEFINITION  putative lipid-binding protein AIR1B [Gossypium hirsutum].
ACCESSION   XP_016729286
VERSION     XP_016729286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873797.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..112
                     /product="putative lipid-binding protein AIR1B"
                     /calculated_mol_wt=11850
     Region          29..103
                     /region_name="HPS_like"
                     /note="Hydrophobic Protein from Soybean (HPS)-like
                     subfamily; composed of proteins with similarity to HPS, a
                     small hydrophobic protein with unknown function related to
                     cereal-type alpha-amylase inhibitors and lipid transfer
                     proteins. In addition to HPS, members...; cd01958"
                     /db_xref="CDD:238924"
     CDS             1..112
                     /gene="LOC107940369"
                     /coded_by="XM_016873797.1:1..339"
                     /db_xref="GeneID:107940369"
ORIGIN      
        1 maskalatia lllsinllfl smanahnqpq cqndavllnv canilnvfdv gigkppkpcc
       61 dlinglvgle ldaclctvvk advlglvnvk pplqfnllln kcgmkrrayc cn
//
LOCUS       XP_016729285             324 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729285
VERSION     XP_016729285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873796.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36583
     Region          <65..124
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     Region          <163..209
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..324
                     /gene="LOC107940368"
                     /coded_by="XM_016873796.1:1..975"
                     /db_xref="GeneID:107940368"
ORIGIN      
        1 mssqlhfepi pqwlkpdsmq mrgpkgtrrc hafrtvflml ssqelwlvrl pskletssrr
       61 sskalkeqgs rfnearivek vlstlperyg arissledsr dlatisltel inalyaqeqr
      121 rasrlekhqe gafqakakva lstsaykgkk nwknrlkpda argedrlcrf ckrpghpear
      181 cwfrpdavcq hckkkgnver vckekgrpgq nqpqqkgeea rvaedssdhe kqvfavscla
      241 gqdvtifktl dksyktrvki gngqfikaeg kgdvlictsi gdkvitnvll vleidrnlls
      301 iaqllergyl vvfkgqecqi tdpn
//
LOCUS       XP_016729281             673 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729281
VERSION     XP_016729281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873792.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..673
                     /product="uncharacterized protein"
                     /calculated_mol_wt=77859
     Region          387..433
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          558..605
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..673
                     /gene="LOC107940363"
                     /coded_by="XM_016873792.2:1..2022"
                     /db_xref="GeneID:107940363"
ORIGIN      
        1 meelknfghq hpllmlneeq ligngngvvd csrcgekvsa pcfscveccg fylhktcaea
       61 plelnhplhr hhplvllqnp pytsdtrcvc dfcdetcekf iyhcscgldf hnkcalftln
      121 iaernlkele hvaledpsfs skndggnlgk cfvcweplam ytyfsldcgf nlhkkcaelp
      181 lklnhlchrk hplvlqfnse rhscktcqvt qrrgflygcs pckfaihiec aspfpdiedk
      241 shqhqftlfw rqipficdac gtegqhvayt cgtcsimvhk kcislpriiq hawhnhrvfh
      301 tyfihkeyfe slnciwchef vdtehgsyfc adcnvifhvn calkekewyc ivseenednk
      361 sldipvnsit kvletnddge vtviehfkhk hylmlndnir ehgdkycdgc lllisakfyh
      421 csrcdfflhk scaelpkmkl fsvhicrete ffsgskpfil tsncmfkcgl crylsngffy
      481 kcnecgmdlc lrcldlslld avkipghkhp lhayydyegq ccacgtdieg ayrckdcnfe
      541 lclfcimrpt kvshkcddhp ltltydkind yvkyhycdic eekmdpkywy yhcetydtsa
      601 hvncvlgkyp fiklgstyne gnhqhpltfv kkihyypeyv gcgkpckdls lecaksgcky
      661 iahwkcrksa mlw
//
LOCUS       XP_016729284             588 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729284
VERSION     XP_016729284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873795.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..588
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67370
     Region          389..433
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..588
                     /gene="LOC107940367"
                     /coded_by="XM_016873795.1:1..1767"
                     /db_xref="GeneID:107940367"
ORIGIN      
        1 meelknyghq hpllmlneeq lidngngvvd csrcaekvsa pcfscveccg fylhktcaea
       61 plelnhpfhr hhplvllqnp pctsdqrcfc dfcdetcekf lyhcscgldf hikcalftfn
      121 igernlkele hvaledpsfs skndggnlgn cfvcweplai ytyfsldcgf nlhkkcaels
      181 lklnhlchrk hplvlqfnse rlscktcqvt perglvygcs pcklaihidc aspvpviedk
      241 shqhpftlfw rripficdac gteghhvayt cgtcsimvhk kcislpliiq htlhvhrvfh
      301 tyfipkeyfe slncmmchev vdtelgsyfc adcdvifhvn calkekewyc ivsqengddk
      361 srdkpvnsit mvlerndage atviehcnhe hylmlsdnir ehgdkccdgc lllisakfyh
      421 csrcdfflhk scaelpkmkl fskhfcgemq ffsgskpfil ssdsmfkcve cgvlsngfsy
      481 kcnecgnhmc lrcfalclqd avkipghkhp llfyydyeeq csacrrdiia afcckdcnfh
      541 lcgwcvllpt tvkhkcdhhi ltltydkind yakyhycdic eeerdpmh
//
LOCUS       XP_040942086             530 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942086
VERSION     XP_040942086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086152.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..530
                     /product="uncharacterized protein"
                     /calculated_mol_wt=61512
     Region          242..287
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          413..460
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..530
                     /gene="LOC107960865"
                     /coded_by="XM_041086152.1:1..1593"
                     /db_xref="GeneID:107960865"
ORIGIN      
        1 meelkyyghq hpllmlneeq fgvvdcsrcg ekvsapcfsc veccgfylhk tcaeapleln
       61 hpfhchhplv lsqnppcasy ercvcdfcde tcekfiyhcs cglnfhikca lftfniaern
      121 lkelehvale dpsfsskndg gnlrkcfgcw eplaiytyfs ldcgfnlhkk caelplkmdr
      181 lchrkhplvl qfncerhack ewycivsqen eedksldipv nsitkvletn ddgeatvieh
      241 ckhkhylmls dnirehgdkc cdgcflfisp kfyhcsrcdf flhkscaelp kmklfskhni
      301 cgeteffsgs kpfiltsdcm fscelceyls ngfsykcnec gsqiclrcld lflqdavkip
      361 ghkhpllfyy dyeeqccacg rdiicafcck dcnfhicnlc virptrvrhk cdehllilty
      421 dkindyvkyh ycdicekerd pklwfyhckt cdtsahvdcv lgkysfirlg stynegnheh
      481 pltfvkkihy ypecvecgmp cedlslecae prcnyiahwk crkpairgry
//
LOCUS       XP_016704405             667 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016704405
VERSION     XP_016704405.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016848916.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016704405.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..667
                     /product="uncharacterized protein"
                     /calculated_mol_wt=77022
     Region          390..435
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          557..604
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..667
                     /gene="LOC107919461"
                     /coded_by="XM_016848916.2:1..2004"
                     /db_xref="GeneID:107919461"
ORIGIN      
        1 meelknyghq hpllmlneeq ligngngvvd csrcgekvsa pcficveccg fylhktcaea
       61 plelnhpfhr hhpllllqnp pytfepgtrc icdfcnetce kfiyhcscgl dfhikcalft
      121 fniaernlke lehvaledps fsskndggnl gkcfvcwepl amytyfsldc gfnlhkkcae
      181 lppkmghvch rkhplllqfn serlsckicq vtpdrglvyg cstcnlaihi dclsplpvie
      241 dkshqhpftl fwrqipficd acgteghhva yacctcsimv hkecislpri mqhawhnhrv
      301 fhtyfihkey frslnciwcy kvvdtehgsy fcadcnvifh vncalkekew ycivtqened
      361 dksldipvns itkvlernda geatliehck hkhylmlsdk isehgdkccd gclllisakf
      421 yhclrcdffl hkscaelski elifdhrcde ehfaglkpfi ltsdcmfece lctylsngfs
      481 ykcnecgihr cvrcvflqfe vkipghkhpl lfyydykgqc sgcgtdinka yrckdcnfgl
      541 clycvvrltr vghncddhpl kltyhkindy ekyhycdice ekrdpkywfy hcetcdtsah
      601 vncvlgkypl iklgstyner dhphpltfak kfpyypkcve cgkpcedlsl ecaepgcnyi
      661 vhwkcgk
//
LOCUS       XP_016743131             471 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743131
VERSION     XP_016743131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887642.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..471
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53599
     Region          368..413
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..471
                     /gene="LOC107952381"
                     /coded_by="XM_016887642.1:1..1416"
                     /db_xref="GeneID:107952381"
ORIGIN      
        1 meelknyghq hpllmlneeq ligngngvvd cskcgekvsa pcfscaecyg fylhktcaea
       61 plelnhpfhr hhplvllqnp pstsdtsldf hikcalftfn isernleele hvaledpsfs
      121 skndggnlgk cfvcweplai ytyfsfdcgf nlrkkcaelp pkmghvchrk hplllqfnse
      181 rlsckicqvt ldrglvygcs pcklaihidc asplqfiedk shqrpftlfw rripficdac
      241 gteghrvayi cgtcsimvhk kcislpriih hvfhyhrvfh tyfidkeyse slncmwchev
      301 vdtehgsyfc adcnvifhvn calkenllyy ivsqeneddk sldvpvnsit kvlerndage
      361 atliehckhk hylmlsdkis khgdkccdgc lllisakfyh clrcdfflhk scaelpkmel
      421 ildhhcagkp fsglnpsfll qtacsnving dtflmdflin vdvdircafd v
//
LOCUS       XP_040942088             248 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942088
VERSION     XP_040942088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086154.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..248
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28245
     Region          <86..>248
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..248
                     /gene="LOC121212744"
                     /coded_by="XM_041086154.1:1..747"
                     /db_xref="GeneID:121212744"
ORIGIN      
        1 mtcvawsahw llhvlhagql qhqispvvtp dkpvqqassf ssvggsfeke gtesssfssd
       61 snsesfissi nvylssamdt dkskmrenrr yeelnekfsk yeeelrdsnl klliveeeiv
      121 klntklkkse slelelkkqi ieleacfsns nsevmrlmee lstckenika seeeilmlna
      181 qilryendls nrgheveklk galcdardnf svqkasfqsk ifdlleketl learlkewel
      241 hgsvleek
//
LOCUS       XP_040942089             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942089
VERSION     XP_040942089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086155.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..314
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34898
     Region          <1..74
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..314
                     /gene="LOC121212745"
                     /coded_by="XM_041086155.1:1..945"
                     /db_xref="GeneID:121212745"
ORIGIN      
        1 mkeyetikqy adrimatvnn irllgdefsd krivekvitt lpekyeskvs sleesrdlsa
       61 ipltelinal yaqepdvqck fckkmghaek vcrnkgrqrp nqtqqpraea qvveensdqe
      121 eqvfavscsv akgkaikgwl idsgctnhmt snagifksid rsfktrvkgg nghfikpeyk
      181 gdvlintptg tklvtnvlfv sdidrnllsi aqllekgysv vfkgkeclts dpsgsklvsv
      241 tmadksfvad wnwdkhepkd itenlatdqa egnqngpemd iddepvrgtr plakiyekaq
      301 vavvepscfe eaea
//
LOCUS       XP_040942090             476 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942090
VERSION     XP_040942090.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086156.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..476
                     /product="uncharacterized protein"
                     /calculated_mol_wt=54989
     Region          211..257
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          371..413
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..476
                     /gene="LOC121212746"
                     /coded_by="XM_041086156.1:1..1431"
                     /db_xref="GeneID:121212746"
ORIGIN      
        1 mghvchrkhp lllqfnserl sckicqvtpn rglvygcspc klaihiecas lfpdiedksh
       61 qhqftlfwrq ipnicdacgt eghhvaytcg tcsimvhkkc vslpriiqhr lhvhrvfhky
      121 fihkeyfksl nciwchevvd tehgsyfcey cnvifhvnca lkekkwyciv seeneddksl
      181 dipvsvstkl rsitevlern dageatviey fkhkhylmls dkirehgdkc cdgclllisa
      241 kfyhcsrcdf flqkscaelp kmtlvpthic rgtqfsglkp iiltsdcmfk cescwfisng
      301 fsykcnecgs pvclrcmthh fqdvvkipgh khpllfyydn kgqcsacgvd fngadgckdf
      361 rhkcdehlla lsydkindya kyhycdicee krdpkhwfyy cetcdtsahv dcilgkypfv
      421 klgstynegd hphpltfvkk fpyypecvkc gehckdlsle caepgckyis hwkclv
//
LOCUS       XP_016720941             270 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_016720941
VERSION     XP_016720941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865452.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..270
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=30107
     Region          <5..55
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          140..226
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     CDS             1..270
                     /gene="LOC107933279"
                     /coded_by="XM_016865452.1:1..813"
                     /db_xref="GeneID:107933279"
ORIGIN      
        1 mqdifemtdl glmtyflgme vnqeeqgifi sqqafalkvl skfsmskckp astpitlgek
       61 lsstsehdrv dekryrslvg cllyltvtrp eimyavslls rfthcynvsh fkvakrvlry
      121 vkgtlnfgvk fgrteelklv gysdsnwagl addmksisaa iainhaiclr kllddlnagq
      181 veatnikvdn qsavaiaknp vfhgkpkhfk iryhfeqfad ilttplaaar feclrkeirv
      241 scfvakeecs kvvttaatcm qlcnhagask
//
LOCUS       XP_016720939             479 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720939
VERSION     XP_016720939.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865450.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..479
                     /product="uncharacterized protein"
                     /calculated_mol_wt=54507
     Region          199..248
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          384..434
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..479
                     /gene="LOC107933277"
                     /coded_by="XM_016865450.1:1..1440"
                     /db_xref="GeneID:107933277"
ORIGIN      
        1 mveysdeeft irhfthahpl klvdsnqkdk vicsiceelc sssssfssss tygcmeykff
       61 lhksciksip rkltnhyiyp cilifitdpy vsdecgfyge rivpgmkfsc gpcvfdlhvk
      121 calfptidse dakeiqhfth phtlvlvqnd eeygseprcv acaqiclapa ptfrfrahve
      181 calkpvveys deeytiqhft hlhplklvds nqkdevicsi ceelcsssss snstygcmec
      241 kfflhkscmk siprqlinhr ihpctlifit fpfwdecdcc gerivshmrf scgacdlnlh
      301 vkcalfptid sedakeiqhf shphtlalvq nneeygsepr cvacaqiclp paptfrcsrs
      361 cnhfflhksc yvklpyksin fkhpfhpghs ltitslpynh hirtcyaccr gidstllays
      421 creseckfnl hldcykplps itfsghqhpl tllektadvt chlcgvncrn filrclpcd
//
LOCUS       XP_016720938             449 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720938
VERSION     XP_016720938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865449.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..449
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51980
     Region          14..61
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          75..118
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          198..248
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          311..367
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          400..>443
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..449
                     /gene="LOC107933276"
                     /coded_by="XM_016865449.1:1..1350"
                     /db_xref="GeneID:107933276"
ORIGIN      
        1 mveysdeest iqhfthlhpl klvdsnqkde vicsiceepc sssssstygc meckfflhks
       61 cmksfprqli nhrihpctli fisypyrena cdccgerivs rmkyscgacd lnlhvkcalf
      121 ptidsevake iqhfshphtl alvqndeeyg seprcvacaq iclasaptfr csrscdhffl
      181 hkscyvklpy nsvnfkhpfh pkhlltitsl pyndhirtcd acfrgidstf layscresec
      241 kfnlhldcyn qrssitfrgh qhlltllekt pdvtchlcgv ncrnfvlrcv pcdinihlqc
      301 lpsapkiikh kshlhplilt kspfeyelns yeeedefycd vceqkrnqre liyycaeckf
      361 itevkcvlae vlsliskdes fereilkdni tkmeirkwhv enlqqkyikl herreeleak
      421 mkelkgeldd vtkeiettkd llgiitpsg
//
LOCUS       XP_016720937             533 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720937
VERSION     XP_016720937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865448.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..533
                     /product="uncharacterized protein"
                     /calculated_mol_wt=60416
     CDS             1..533
                     /gene="LOC107933275"
                     /coded_by="XM_016865448.1:1..1602"
                     /db_xref="GeneID:107933275"
ORIGIN      
        1 mtldritlqn iekkpnenfr qyaqrwreva mqvqppllek ettmlfintl kapfithmig
       61 sttkrfadiv magemienai rggriegevv krsaprrkdn eesntrherm qftpipvtyr
      121 elyqnlydah aiapfhlkpl qppypkwyda narceyhagi sehsienctr fkkaverlik
      181 ngvlkfestl ntenplpnhd nqgvnaigea ggkrekenvd eiripmrviw eemmkrgfid
      241 skelqvyegs ssekqvcvle neqqrtsrpr iiislpgnne mgtpaapkvi iytptpfpyk
      301 dskkvpwsyd csvtvpgeen iasaskdvrd egsytrsgkr ydmgdvrvep tksknveikk
      361 ksevpvnepv reeeakeflk flkhseysvv kqlrkqpasi svlalllsse vhrnallksd
      421 nfiyfnddei spggirstka lhitthckgy tlpgavpssl hqklklvtdg rlitinveen
      481 iiaavtskpp yvetneeaie csfhsleivn atfisegskv pvpkmygatr mal
//
LOCUS       XP_040942091             388 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942091
VERSION     XP_040942091.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086157.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..388
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44885
     Region          14..61
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          197..247
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          310..366
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..388
                     /gene="LOC107933273"
                     /coded_by="XM_041086157.1:1..1167"
                     /db_xref="GeneID:107933273"
ORIGIN      
        1 mveysdeeyt iqhfthlhpl klvdsyqkde vicsiceelc sssssstygc meckfflhks
       61 cmksiprqli nhrihpctli fitypfwyec dccgerifsh msfscgacdl nlhvkcalfp
      121 tidsedakei qhfshpqtla lvqndeeygn eprcvacaqi clapaptfrc srsrdhfflh
      181 kscyvklpyk syklkhpshp dhpltikslp yndhirtcda cfrgidstll ayscqkseck
      241 fnlhldcykl lpsitfsghq hlltliekta dvtchlcgvn chnfvlrcvp cdinihfqch
      301 psapetikhk shlhpltltn spfefelnsd eeeeefycdv ceqkrnqrel iyycteckfi
      361 aeikcvfsev llllfednsf gkklqkmm
//
LOCUS       XP_016720950             489 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720950
VERSION     XP_016720950.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865461.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720950.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..489
                     /product="uncharacterized protein"
                     /calculated_mol_wt=56292
     Region          <120..176
                     /region_name="Methyltransf_11"
                     /note="Methyltransferase domain; pfam08241"
                     /db_xref="CDD:462406"
     Region          288..448
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..489
                     /gene="LOC107933291"
                     /coded_by="XM_016865461.2:1..1470"
                     /db_xref="GeneID:107933291"
ORIGIN      
        1 melklsllrn ivayvlffgi lvtvirfayv vttigescnl ynfcffknnv apqsnphnhl
       61 yasrewdkav hfyssifqdm iskgylspns kslcveapng hevfalkkig vedsigifrk
      121 aakplvirge gdripfddnt fdfifsggar vemsarpfdf aseivralkp qgfavfhvka
      181 ndsyslnsfl dlfhscklik vldidgfnps mpyireivlk kenhgyrkkp gddskncsfq
      241 ahkqelvqka eplieeeplk pwvtlkrnik nvkyfssmvd isfknryvyi dvgarnygss
      301 igswfikqyp kqnksfhvya ieadkafhkq yaskkkavtl lpyaawvrne tlsfeindgp
      361 aqekvnktkn kgrgmgriqp vkssrgelnt evneiqgfdf aewlkntftk rdfvvikmdv
      421 egtefdlipk lfetgaicli deiflechyn rwqrccpgqr stkykkhyrh clelftslrk
      481 sgvlvhqww
//
LOCUS       XP_040942092              95 aa            linear   PLN 06-AUG-2024
DEFINITION  protein AGENET DOMAIN (AGD)-CONTAINING P1-like [Gossypium
            hirsutum].
ACCESSION   XP_040942092
VERSION     XP_040942092.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086158.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..95
                     /product="protein AGENET DOMAIN (AGD)-CONTAINING P1-like"
                     /calculated_mol_wt=10751
     Region          4..61
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(14,24,26,34,45,47)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410476"
     Region          75..>89
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     CDS             1..95
                     /gene="LOC121212749"
                     /coded_by="XM_041086158.1:1..288"
                     /db_xref="GeneID:121212749"
ORIGIN      
        1 mvvffegdev kvcskeegfl llgsyyeaki lppyknivee edqtsplvei vstdevrpmp
       61 ppatitratq vfhyldrvda fdndgwwvgi lflll
//
LOCUS       XP_040942093             151 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase arih1 [Gossypium hirsutum].
ACCESSION   XP_040942093
VERSION     XP_040942093.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086159.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..151
                     /product="E3 ubiquitin-protein ligase arih1"
                     /calculated_mol_wt=17195
     Region          106..139
                     /region_name="BRcat_Rcat_RBR"
                     /note="BRcat (benign-catalytic) and Rcat
                     (required-for-catalysis) domains, part of the RBR
                     (RING1-BRcat-Rcat) domain; cl45895"
                     /db_xref="CDD:459240"
     Site            order(110,113,128,130,135,138)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438995"
     CDS             1..151
                     /gene="LOC107933265"
                     /coded_by="XM_041086159.1:1..456"
                     /db_xref="GeneID:107933265"
ORIGIN      
        1 mvvsqlmcvk smlrqshwgs lstlgcshfy ciecavkyiq sklddnvses nvqwgkalce
       61 sallasekfy kvlikiarhc vdcnkfqklk tlgsdntfvd latrkkwrqc pnckmlvgks
      121 fgchhvkcrc gerfcynygg klnnrphpwc m
//
LOCUS       XP_040942094             165 aa            linear   PLN 06-AUG-2024
DEFINITION  benzyl alcohol O-benzoyltransferase-like [Gossypium hirsutum].
ACCESSION   XP_040942094
VERSION     XP_040942094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086160.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="benzyl alcohol O-benzoyltransferase-like"
                     /calculated_mol_wt=17820
     Region          <4..155
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..165
                     /gene="LOC121212750"
                     /coded_by="XM_041086160.1:1..498"
                     /db_xref="GeneID:121212750"
ORIGIN      
        1 mvskvrllci anvrskfnpp lpsgyygnvl vsataittvk nlchnpvgya velikkakan
       61 vteeyiksta dlfairgksl yvsavigsyl vsdlmhlgfe nvdfgwgkav fggpanatrl
      121 tsffiptknk egqvgtlvpi clpasamerf sneldnmlkh qhieg
//
LOCUS       XP_040942096             117 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing transcription factor NGA4 [Gossypium
            hirsutum].
ACCESSION   XP_040942096
VERSION     XP_040942096.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086162.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..117
                     /product="B3 domain-containing transcription factor NGA4"
                     /calculated_mol_wt=13627
     Region          4..99
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(7,10,16,19,21,52,65,67..68,70..71)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..117
                     /gene="LOC121212751"
                     /coded_by="XM_041086162.1:1..354"
                     /db_xref="GeneID:121212751"
ORIGIN      
        1 mkqlfskvls ptdiehrlav pseilwafef dqarrcadfe vkdkhgqtwe frcstrkkdf
       61 hpkpvvskgw rkfvkdkglq agdkvvfykd vegdssykii tmkkvfklfg eevwlps
//
LOCUS       XP_016716580             358 aa            linear   PLN 06-AUG-2024
DEFINITION  L-type lectin-domain containing receptor kinase VIII.1 [Gossypium
            hirsutum].
ACCESSION   XP_016716580
VERSION     XP_016716580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016861091.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="L-type lectin-domain containing receptor kinase
                     VIII.1"
                     /calculated_mol_wt=39899
     Region          38..259
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(108,244)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(141,143,158)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     CDS             1..358
                     /gene="LOC107929606"
                     /coded_by="XM_016861091.2:1..1077"
                     /db_xref="GeneID:107929606"
ORIGIN      
        1 mapisshsyi psfnlqifif lfltakplss fahsalgnnp sfdphislfg darvedgssy
       61 vqltrphaps sglllldkpl kltmennvgq pvsfstefsf siapgncdgl afvlipngfh
      121 arfqgqgsfg lsgeniflgi efdtkkdddk agnfnpnhvs idihgvesvk lsnlsslnlv
      181 lnsgnvlksw vdydssskll qvrlsklden rplnpilayh idlvemwgnh dvfvgiists
      241 dessqissnv nvhswrfrvk fvpswmhslp adprsymdnk dsketreekg rfcalpilar
      301 lifatgcgal fafmmlfmwa ifvsrhtvfp vkyqpshedf ryekvnvvve kedqcnkv
//
LOCUS       XP_016716438             466 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 91C1 [Gossypium hirsutum].
ACCESSION   XP_016716438
VERSION     XP_016716438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860949.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..466
                     /product="UDP-glycosyltransferase 91C1"
                     /calculated_mol_wt=52551
     Region          1..439
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(18..19,21,164,170..171,175,203,279,356,358,360..361,
                     364)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(18,279,356,358,360..361)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            19
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..466
                     /gene="LOC107929512"
                     /coded_by="XM_016860949.2:1..1401"
                     /db_xref="GeneID:107929512"
ORIGIN      
        1 mdrteklhia mfpwlayght mpflevskfl aqkghrisyi stpknisrlp klpphlssni
       61 sfvefslphv hglppgvest sevpihkvpy lkraydklrd pltdflknsn vnwiihdfap
      121 ywlpgiaapl ginlvffsif naststfggp psallgdhrk rledftvvpe widypcnnva
      181 ftlyetvnyq qcvdddvpds hrigrliqgc qfvtmrtcfe fewdaiklli klyqkpvvpv
      241 gllppllslp snevnkweai kswldskgek svlyialgse vnlseesmhq lafgveksnl
      301 pfiwvvrnrp vdegqmndii ppgyekrvsk rglvlrdwvp qlrilahssg ggflthcgws
      361 siiealkygr alilfsggns gqglnarllh gkkvgleier nevdgsftsd lvaatirrvm
      421 vepegevfra naqamreifc neelnnnyln eftrfieefs psachc
//
LOCUS       XP_016716456             311 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016716456
VERSION     XP_016716456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860967.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..311
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35551
     CDS             1..311
                     /gene="LOC107929524"
                     /coded_by="XM_016860967.1:1..936"
                     /db_xref="GeneID:107929524"
ORIGIN      
        1 mcrscqdila svlrriisks lrrfginrat rlnsystvdl vptveeytal lrcprfqedr
       61 iysravnvpt fwkklmaitg iseqwitari kekgeckcis wdalkdlilt hpdeakrvdv
      121 falslyglmv fpralgyvde attdlfhrlg krvasvpail aetfkslgac rkagagrfvg
      181 ctqlllawfy shfwlidkvv cqvffedysp lkdivasirr vdvpeenwia llqnlqskdv
      241 ewrapwmipg eilyrcgsfn wvpllgiwga igyapllvlr qfglrqfvpa thgltqsefa
      301 yreadykkrg r
//
LOCUS       XP_016716455             313 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016716455
VERSION     XP_016716455.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860966.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..313
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35645
     Region          124..148
                     /region_name="SWIM"
                     /note="SWIM zinc finger; cl45927"
                     /db_xref="CDD:459272"
     CDS             1..313
                     /gene="LOC107929523"
                     /coded_by="XM_016860966.1:1..942"
                     /db_xref="GeneID:107929523"
ORIGIN      
        1 mdelrktnhh sydwlkkknp ahwsrshfsi rshsdmlmil eargkpiltm ietvrtkiml
       61 livkkkekad kwkgtlcpki kkkldvnikd slrcvpshag gdkyqvecgp gsqhvvdlvq
      121 nsyscrnwdl tgilcmhaka vihvknefpe tyvqtwhtkq tqiqiysnfv spvrgpkqwa
      181 slsnmlpilp pplrrppgrp tkvrrkepde pqtterlskr gvemrcskck iighnkrsck
      241 gevgqnipev krhqvgvrtq qeatpsqqeg tltqqgaptq lptapthqea asrqklplkr
      301 ksttttvrwm pst
//
LOCUS       XP_040942098             715 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942098
VERSION     XP_040942098.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086164.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..715
                     /product="uncharacterized protein"
                     /calculated_mol_wt=82425
     Region          277..344
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          446..540
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          <464..623
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
     CDS             1..715
                     /gene="LOC121212752"
                     /coded_by="XM_041086164.1:1..2148"
                     /db_xref="GeneID:121212752"
ORIGIN      
        1 mnnevflvyv vfdgeivegd igcvfqgrqr vglrfkknvk laemkrkisa kiaircgkam
       61 sklfykfpis tdpfkfcamq llddddlgtm meiwwsagsv npqpvelfae ladlepvenv
      121 spisqhrefd fdlnvgwtsq lecggtsqip kipnyggswy nnptlgprlq ihpeviiste
      181 tnvremtnng edsdqdvedf sdpdvdevpd dindegpeev edvygplfyn pshgiilrne
      241 prgnmlnvdp daahasefse yadivpahrl asnsqfdelf vgqqfenkad cvfainqhsm
      301 klsinykvak stptlyvgec wraddgcrwr vhaafiqrtq qwqirkldgr htymqarfqy
      361 rvsyrkawwa kqmamqqlyg dwdesynelq swilamveyv pgtvvdlqtl pyrgpngele
      421 lekrvfrllf ltfdpcvraf shckpvvqvd gtwvygkytq illiaiaqdg ngnvlpiafa
      481 ivesensesw ayfirnlrrh vvrqdnicii sdrskglvaa irqsevpwrs vycirhiavn
      541 fhneyknkdw rkrivnmgye lephrfrhkl arletdmagc kpsltqwlgs meswqwvqcf
      601 degylyghit tnlveavnsv lkrthhlpit vvfsatfyrl atlmtkmglk qakqleaghv
      661 yvekirdamk dntqrsrlmn velysrnlet lrvteyisrr sgvpprsygv dlrnk
//
LOCUS       XP_016729744             160 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729744
VERSION     XP_016729744.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874255.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729744.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..160
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18510
     CDS             1..160
                     /gene="LOC107940799"
                     /coded_by="XM_016874255.2:1..483"
                     /db_xref="GeneID:107940799"
ORIGIN      
        1 mdsssssmnh tisleelklf htidraifsr lvlnlqrqpf esmhvmalfl wlenysctpg
       61 lnlvyniqpw sdplinalad eavqclicln tdefpfshfh ddkctiplir kltgneislr
      121 ffhenrveiv critqlvrhi clrafddimk lihdplimpv
//
LOCUS       XP_016694533             152 aa            linear   PLN 06-AUG-2024
DEFINITION  EG45-like domain containing protein [Gossypium hirsutum].
ACCESSION   XP_016694533
VERSION     XP_016694533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839044.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..152
                     /product="EG45-like domain containing protein"
                     /calculated_mol_wt=16372
     Region          26..131
                     /region_name="DPBB_EG45-like"
                     /note="double-psi beta-barrel fold of EG45-like
                     domain-containing proteins; cd22269"
                     /db_xref="CDD:439249"
     CDS             1..152
                     /gene="LOC107911160"
                     /coded_by="XM_016839044.1:1..459"
                     /db_xref="GeneID:107911160"
ORIGIN      
        1 mrklsilfci alafiltfss wevvadtgta tfytppyvps acngyqndrv miaaasdafw
       61 aggsacgrny kvecrgatnq gdpnpcrgqd ymvvkivyyc psgcqgtidl sqeafaaian
      121 pdadkteisf hqyvdhllml lsavalvsnc ml
//
LOCUS       XP_040942099             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942099
VERSION     XP_040942099.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086165.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..369
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42646
     Region          <3..25
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..174
                     /region_name="rve"
                     /note="Integrase core domain; pfam00665"
                     /db_xref="CDD:459897"
     CDS             1..369
                     /gene="LOC121212753"
                     /coded_by="XM_041086165.1:1..1110"
                     /db_xref="GeneID:121212753"
ORIGIN      
        1 mlgydysily kkgtqntvad alsrilyeqd pqifqcvgai slswsklwdq ivdsyrrwkv
       61 dnstslgllq plpipdqaws aismdfmegl pvskgkstil vvvdmltkyg hfialvhsft
      121 aitvaheyln qiyklhglpk sivsnrdrvf fsnfwqelfr hlgtklqlst ayhpqtdrim
      181 vaivdrmrkv lhfhlkrthe rmkqlankrr snrefavgdl vylkiqpyrq hslrkfrnqk
      241 lspryfgyfp iearvglvay rlqlpptayi qstfhvsqlk khirsilssp vlppvgsnda
      301 vlkepikvld rcivkkgnqa ttevliewfs kmgnqattkv liewantfpk datwenlkei
      361 qhrfpafdp
//
LOCUS       XP_016694536             326 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
            [Gossypium hirsutum].
ACCESSION   XP_016694536
VERSION     XP_016694536.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839047.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694536.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..326
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD2-5"
                     /calculated_mol_wt=36441
     Region          24..289
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(24..28,32,44,46,74,90..93,97,99,142,144,146..147,
                     149,160,163,180..183)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(24..28,32,44,46,74,90..93,97,142,144,146..147,149,
                     160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(28,97,99,142,144,146,163,180..183)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(159..166,177,178..183)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..326
                     /gene="LOC107911162"
                     /coded_by="XM_016839047.2:127..1107"
                     /db_xref="GeneID:107911162"
ORIGIN      
        1 mlgmptrfsy eelknitknf snklgeggfg svfhgilplg sgvavkhqfn fgavnksfma
       61 evqtigsihh fnlvslvgfc aessnrllvy eymangsldr wifnqnrdla ldwqirrkii
      121 ldiakglayl heecnqkiih ldikpqnivl denfnakisd fglskligkd qsrvittmrg
      181 tpgymapewl sscitekvdv ysfgivvlei lcgrrnvdes qqeedmhllg lfkrkqkegq
      241 lmdlvdkcsd dmqsnaaevv evmkvaawcl qteyarrpsm stvvklfegs vdvtgslned
      301 flngitlepv dtfpsivlps mlsglr
//
LOCUS       XP_040942100             295 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
            [Gossypium hirsutum].
ACCESSION   XP_040942100
VERSION     XP_040942100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086166.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..295
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD2-5"
                     /calculated_mol_wt=33293
     Region          23..277
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(23..24,27,29,41,43,71,87..90,139,143..144,146,
                     156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..295
                     /gene="LOC121212754"
                     /coded_by="XM_041086166.1:1..888"
                     /db_xref="GeneID:121212754"
ORIGIN      
        1 mptrfsyeel knvtknfsnk vdeggygsvf hgtlpsgsei avkhlvgfga vnksfvaevq
       61 tigsihhfnl vslvgfcaqk fnrllvnkym angpldrwif nknyesalrw hirkkiiidi
      121 akglaylheg clqkiihldi kpqnillden fnarvsdfgl skligrdqsr vvttikgtpg
      181 ymapewlssv iiekahvysf givileilcg rpnvdksqqe edmhllklfr rkqeegqlld
      241 lvdqcsddmq snatefvemm kvaasclqne yarrpsmfaa vklfedsydv vsnlk
//
LOCUS       XP_016731848             142 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S23 [Gossypium hirsutum].
ACCESSION   XP_016731848
VERSION     XP_016731848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..142
                     /product="40S ribosomal protein S23"
                     /calculated_mol_wt=15606
     Region          1..142
                     /region_name="PTZ00067"
                     /note="40S ribosomal S23; Provisional"
                     /db_xref="CDD:185422"
     Site            order(26,28..32,34,36..38,39..40,42..48,59..67,73..75,83,
                     85..88,101..107,110..113,119..120,125,127,137..139)
                     /site_type="other"
                     /note="18S rRNA interaction site [nucleotide binding]"
                     /db_xref="CDD:239465"
     Site            order(59..60,111)
                     /site_type="other"
                     /note="streptomycin interaction site [chemical binding]"
                     /db_xref="CDD:239465"
     Site            60..61
                     /site_type="other"
                     /note="28S rRNA interaction site [nucleotide binding]"
                     /db_xref="CDD:239465"
     Site            order(61..66,87..95)
                     /site_type="other"
                     /note="aminoacyl-tRNA interaction site (A-site)
                     [nucleotide binding]"
                     /db_xref="CDD:239465"
     Site            96
                     /site_type="other"
                     /note="eEF2 interaction site [polypeptide binding]"
                     /db_xref="CDD:239465"
     CDS             1..142
                     /gene="LOC107942655"
                     /coded_by="XM_016876359.2:158..586"
                     /db_xref="GeneID:107942655"
ORIGIN      
        1 mgktrgmgag rklrthrrrq rwadkaykks nlgnewkkpf agsshakgiv lekigieakq
       61 pnsairkcar vqlikngkki aafvpndgcl nyieendevl iagfgrkgha vgdipgvrfk
      121 vvkvsgvsll alfkekkekp rs
//
LOCUS       XP_016694538             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_016694538
VERSION     XP_016694538.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839049.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=19748
     Region          140..>175
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..176
                     /gene="LOC107911164"
                     /coded_by="XM_016839049.1:1..531"
                     /db_xref="GeneID:107911164"
ORIGIN      
        1 mkdvfemtnl glmayflsmk vnqndhsifi sqkafalkvl skfcmanckp astpvalgek
       61 ilsnsdhnrv deksyrslig cllyltatkp dimyavslls rfmhccngay fkaakrvlry
      121 vkgtlsydvk feradelklv gysdndwagl dddmkstssy fftlgsgvfs wsskkk
//
LOCUS       XP_040942101             133 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 12 [Gossypium hirsutum].
ACCESSION   XP_040942101
VERSION     XP_040942101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086167.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..133
                     /product="beta-glucosidase 12"
                     /calculated_mol_wt=14918
     Region          71..>126
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..133
                     /gene="LOC121212756"
                     /coded_by="XM_041086167.1:1..402"
                     /db_xref="GeneID:121212756"
ORIGIN      
        1 mdchyrnety hlkkkicfgf qlqspgnsrh iltfafallv clsvhgeiaq kpqkrigeps
       61 sdseesfvnv krsdfradfv fgastaaaqi egsekskgkr ptvwdqfirk lpdkivdnss
      121 levaidlhnc ykv
//
LOCUS       XP_040942103             244 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942103
VERSION     XP_040942103.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086169.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..244
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27074
     CDS             1..244
                     /gene="LOC107894958"
                     /coded_by="XM_041086169.1:189..923"
                     /db_xref="GeneID:107894958"
ORIGIN      
        1 memmmvimmm lmmmmigsma ddtndvyspc ddakvqkldg ftfgvafskk effsfenvql
       61 spcdsrlgla tksaqlavfr pkldeifslp smaaissill kilklfsffl sffldfklka
      121 ggymvafagr kyaarslpim vaddkntits ftlvlefkqg tlqnlfwkss gcdscsgesa
      181 tclnnqdcar ptskcgqngc nlgiqlafsg tdknlealns wyevskfrqn slyglyadlr
      241 dklf
//
LOCUS       XP_016674503             304 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674503
VERSION     XP_016674503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819014.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..304
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32441
     Region          39..99
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          <234..264
                     /region_name="WAK_assoc"
                     /note="Wall-associated receptor kinase C-terminal;
                     pfam14380"
                     /db_xref="CDD:464161"
     CDS             1..304
                     /gene="LOC107893874"
                     /coded_by="XM_016819014.2:357..1271"
                     /db_xref="GeneID:107893874"
ORIGIN      
        1 msplpaalfi silfllpqlh kvcaashaag rtiptlgtcn ntcgtipvmf pfgtgfgcgh
       61 pyfaryvkcn agtlqfstgt giytvssidy ptstivvadp fmstcssmqn sgsfsldrts
      121 pftltgsnif vllgcsstsp vfdpsedlcd tgsgsrvcsg lysckgvtgi glpqnaptst
      181 ccvydslmgi gsgysldlpk lqcssytsiy efgdeedpmk wkfgisllyn dsyytpackd
      241 cetngglcgf svldesfsci crdgvntttn cfghgytwsg awepkiqtkt sigvfllwwi
      301 yllv
//
LOCUS       XP_016674505             347 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g15670 [Gossypium hirsutum].
ACCESSION   XP_016674505
VERSION     XP_016674505.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819016.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..347
                     /product="F-box/kelch-repeat protein At1g15670"
                     /calculated_mol_wt=38343
     Region          10..51
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(14..15,17..19,22..23,26,37..39,41,44)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438923"
     Site            order(14,18,21..22,25..26,29,31..32,37..39,41)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438923"
     Region          82..>229
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          115..158
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          162..207
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          210..253
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..347
                     /gene="LOC107893876"
                     /coded_by="XM_016819016.2:73..1116"
                     /db_xref="GeneID:107893876"
ORIGIN      
        1 mesfefstel vpglpnelgl ecltrlpyta hrlasgvchr wrdlfqspdf hyhrkklgyt
       61 qkvaclvqaf sggtvngpkr pgelpsygis vfeslnrgwy rlppvpkypn glplfcqlas
      121 cegklvvmgg wnpvsydpva dvfiydfttq qwrqgkdmps krsffaigac sgrvyiaggh
      181 denknalrta wvydlrkdew gqmgelsker decegvvige defwvvsgyg terqgqfdgs
      241 adaygfksge wrvaegiwep gqcprssvgi gkggklmnwa eldtavgvga rgimlvgrvl
      301 vtgseyqggp hgfymvevke gqigklekin vpdefsgfvq sgcfvei
//
LOCUS       XP_016674506             419 aa            linear   PLN 06-AUG-2024
DEFINITION  ureide permease 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674506
VERSION     XP_016674506.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819017.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..419
                     /product="ureide permease 1 isoform X1"
                     /calculated_mol_wt=45222
     Region          64..414
                     /region_name="Ureide_permease"
                     /note="Ureide permease; pfam07168"
                     /db_xref="CDD:462111"
     CDS             1..419
                     /gene="LOC107893877"
                     /coded_by="XM_016819017.2:137..1396"
                     /db_xref="GeneID:107893877"
ORIGIN      
        1 mdfagiasli slpteriics glkmyvvesk ggaiacmlla lfflgtwpai mtllerrgrl
       61 pqhtyldytm tnllaaviia ltfgeigsst pekpnfiaql sqdnwpsilf amaggvvlsl
      121 gnlstqyawa fvglsvtevi tasitvvigt tlnyflddki nraqilfpgv gcfliavclg
      181 savhssnaad nkaklkgagy sptlngaitn eelrnlekgt giieeakagt aefllelekr
      241 raikvfgkst iiglsitffa gvcfslfspa fnlatndqwh tlkegvphlv vytaffyfsv
      301 scfmialiln itffylpvld lprssfkayi ndwngrgwal lagllcgcgn glqfmggqaa
      361 gyaaadavqa lplvstfwgi llfgeyqkss rrtyvllfgm lfmfivavgv lmassghrk
//
LOCUS       XP_016674507             396 aa            linear   PLN 06-AUG-2024
DEFINITION  ureide permease 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674507
VERSION     XP_016674507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819018.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..396
                     /product="ureide permease 1 isoform X2"
                     /calculated_mol_wt=42804
     Region          41..391
                     /region_name="Ureide_permease"
                     /note="Ureide permease; pfam07168"
                     /db_xref="CDD:462111"
     CDS             1..396
                     /gene="LOC107893877"
                     /coded_by="XM_016819018.2:297..1487"
                     /db_xref="GeneID:107893877"
ORIGIN      
        1 myvveskgga iacmllalff lgtwpaimtl lerrgrlpqh tyldytmtnl laaviialtf
       61 geigsstpek pnfiaqlsqd nwpsilfama ggvvlslgnl stqyawafvg lsvtevitas
      121 itvvigttln yflddkinra qilfpgvgcf liavclgsav hssnaadnka klkgagyspt
      181 lngaitneel rnlekgtgii eeakagtaef llelekrrai kvfgkstiig lsitffagvc
      241 fslfspafnl atndqwhtlk egvphlvvyt affyfsvscf mialilnitf fylpvldlpr
      301 ssfkayindw ngrgwallag llcgcgnglq fmggqaagya aadavqalpl vstfwgillf
      361 geyqkssrrt yvllfgmlfm fivavgvlma ssghrk
//
LOCUS       XP_040942104             342 aa            linear   PLN 06-AUG-2024
DEFINITION  ureide permease 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942104
VERSION     XP_040942104.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086170.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..342
                     /product="ureide permease 1 isoform X3"
                     /calculated_mol_wt=36921
     Region          11..337
                     /region_name="Ureide_permease"
                     /note="Ureide permease; pfam07168"
                     /db_xref="CDD:462111"
     CDS             1..342
                     /gene="LOC107893877"
                     /coded_by="XM_041086170.1:134..1162"
                     /db_xref="GeneID:107893877"
ORIGIN      
        1 macyydatrt sstpekpnfi aqlsqdnwps ilfamaggvv lslgnlstqy awafvglsvt
       61 evitasitvv igttlnyfld dkinraqilf pgvgcfliav clgsavhssn aadnkaklkg
      121 agysptlnga itneelrnle kgtgiieeak agtaefllel ekrraikvfg kstiiglsit
      181 ffagvcfslf spafnlatnd qwhtlkegvp hlvvytaffy fsvscfmial ilnitffylp
      241 vldlprssfk ayindwngrg wallagllcg cgnglqfmgg qaagyaaada vqalplvstf
      301 wgillfgeyq kssrrtyvll fgmlfmfiva vgvlmassgh rk
//
LOCUS       XP_040942105             310 aa            linear   PLN 06-AUG-2024
DEFINITION  ureide permease 1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942105
VERSION     XP_040942105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086171.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..310
                     /product="ureide permease 1 isoform X4"
                     /calculated_mol_wt=33323
     Region          64..>290
                     /region_name="Ureide_permease"
                     /note="Ureide permease; pfam07168"
                     /db_xref="CDD:462111"
     CDS             1..310
                     /gene="LOC107893877"
                     /coded_by="XM_041086171.1:139..1071"
                     /db_xref="GeneID:107893877"
ORIGIN      
        1 mdfagiasli slpteriics glkmyvvesk ggaiacmlla lfflgtwpai mtllerrgrl
       61 pqhtyldytm tnllaaviia ltfgeigsst pekpnfiaql sqdnwpsilf amaggvvlsl
      121 gnlstqyawa fvglsvtevi tasitvvigt tlnyflddki nraqilfpgv gcfliavclg
      181 savhssnaad nkaklkgagy sptlngaitn eelrnlekgt giieeakagt aefllelekr
      241 raikvfgkst iiglsitffa gvcfslfspa fnlatndqwh tlkegvphlt yrdhrsrlts
      301 mtgmaeaghf
//
LOCUS       XP_040942106            2537 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942106
VERSION     XP_040942106.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086172.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2537
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X1"
                     /calculated_mol_wt=291464
     Region          2080..2424
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2537
                     /gene="LOC107893591"
                     /coded_by="XM_041086172.1:629..8242"
                     /db_xref="GeneID:107893591"
ORIGIN      
        1 mgkfligfvl pqllltaall nrslislvdl ltflliqyaa peigfqfprq sllswytlif
       61 ssltilshai fyivwvvkgd qwsisdaqwa kligfvrdqs ssfpsliyfl mvqvlaalva
      121 lfeisgsrfg ldsqsdsfwg hlysfvlqig shlrvlccll lpavqlivgi shpswaslpf
      181 ficssiglvd wsltsnflgl frswryllly aglnivllyi yqlpveyygi fkwladfigl
      241 ykisaksews eicsglsliv fyiilswirc dlmemdfims arassltrql lpskhsffir
      301 esrsgvrhtn illrgpilrt fginyftygf pisllalsfw sfhfaslyaf gllayvgyil
      361 yvfpsmyhlh rlnglllvli llwavstyif niaftvlske kwqdmeiwet iglwhypipg
      421 fyllaqfslg vlvalsnlvn nsvflylsdr dgpsssddss lddteetkvl ivativyglr
      481 kssramvlml lflialnpgl ipalymaffl ifllshhvgt kiwqclillc eahftllyll
      541 qlnlisstle kkgsiaekil sqlgsfnhak sgdflkiavl acfsaihnhg femllsfsai
      601 vqhtpcppig ftilragllk sviltvytsk srnppeinfs herkigsyln tigktflsty
      661 rscgtyivfl tilltvyvvt pnyssfgylf fllmwiterq lvgktvkrlw lplkvyaiav
      721 fvfiyglsaf swlqewlsrl vklssafgyn peasmlkniw eslavlvvmq lhryerrqsk
      781 nfaprddvpe tdaftflkrl liwhsekily ltifyaslsp isafgfsylf glvicaissk
      841 nsqipsklfl vysaslvmie ypfqmwgyqa emfpgqkhhs vsfflglqvy epgflgvefg
      901 lrgkvlviva cilqhsvsqw fekmpsnfen egwwedscgl fmsteiasng dmnftrgrkc
      961 ldanpllrkm kkprsyscps lktiilggmn paggsegrnh tnghlqessn dnhkwkrkqi
     1021 hmlrkerlem qkaslkvyik fwvenmfnlf gleinmiall lasfsvlnai sllyiaslaa
     1081 cillhrdain klwlifvflf asiftleyma fllnltswmh lsptrakalc ndcwrsshih
     1141 fdyckkcwlg fivdeprmli syytvfmfsc lklhadrlss lsgfqtykem mlhskqvsgl
     1201 sdlsfetrvl wtfldylrly sychlldlvl alilitgtle ydvlhlgylg falvffrirl
     1261 qilkkknsif kflriynfal ivlslayqsp fvgdfcegkc emidriskvi glhkygfhvt
     1321 srfalvevii filvslqsym fsslefdyvs kyleaekisa lvreqekraa wktahlqhir
     1381 kseeqkrmrn lqvekiksem lnlliqlhsl sttncgstfp egkikrnrnl svnsnpsqtt
     1441 pkkwdadler ndlsgrldll snhdmngspr sertvvlcee dsrqqsvnsl feidelhetv
     1501 ngnmyshtkp qekyqskrsp lasavqligd gvsqvqslgs mavmnlasll niehekldsy
     1561 dhssddevfy evenhdfgge hierthsmls dsdrnmfnva rrqikiifhh iwdqmrsnnn
     1621 vvcyccfili flwnfsllsm vylvglflya lcvntgpshm fwvimliyte vcillqylyq
     1681 iiiqhfgmif kaglfrelgf packnmssfv ishwplflvy lftllqyait asegewtvta
     1741 efsftrknhh qeiaaydfgf frrlkglllh lrnvmevlir nlyrywislt qesetppyfv
     1801 qlsmevnlpp gdgiqpemie skmnkllkim hdrrcrdnln iypasrvrvq sierspendn
     1861 islvvfevly aspsgdssfk egqrsltpsa dvtseileay hadifreirf pytilsvigg
     1921 gkkdidlyay vfcadlvvff lvaifyqsvi knnseflevy qhedqfpkef vfilmviffl
     1981 ivldrviylc sfatakvify lftlflftys vtnyawqmep sdkhagkfal raiyltklis
     2041 lalqaiqirf gipnesnlyr qfltssisqt nflgfriyra lpflyelrcv ldwsctttsl
     2101 tmydwlkled ihgslflvkc dadlnrakhq qgkkqtkltk fcsgiclffi licviwapml
     2161 myssgnltni anpireasvq idiktssgrl tlfettlcer iswnkvkheh idldpqgyld
     2221 nynevdiqli ccqpdaskvw lvppvvqarf idslqqsmdi vfswqfrrdr pkgkevvkhq
     2281 llvadhdlpk saevmqvlng tansfrmfni ypryfrvtgs gdlrfleqlv ekvsgdlvln
     2341 hgnpewwsfq didassgtgc cefagpvaii vseetpqgil gdtlskfsiw glyitfvlav
     2401 grfirlqcsd lrmriqvenl pscdsyvgtg clqsvrtyml qelrvslrlk rfftghwsaf
     2461 idlhtccsst lsltnyvsss piqpnfyysy dfffqalfsd dskisfflgl gegihskgsl
     2521 nyleinncki kskkihi
//
LOCUS       XP_040942107            2502 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942107
VERSION     XP_040942107.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086173.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2502
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X2"
                     /calculated_mol_wt=287320
     Region          2045..2389
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2502
                     /gene="LOC107893591"
                     /coded_by="XM_041086173.1:629..8137"
                     /db_xref="GeneID:107893591"
ORIGIN      
        1 mgkfligfvl pqllltaall nrslislvdl ltflliqyaa peigdqwsis daqwakligf
       61 vrdqsssfps liyflmvqvl aalvalfeis gsrfgldsqs dsfwghlysf vlqigshlrv
      121 lcclllpavq livgishpsw aslpfficss iglvdwslts nflglfrswr ylllyaglni
      181 vllyiyqlpv eyygifkwla dfiglykisa ksewseicsg lslivfyiil swircdlmem
      241 dfimsarass ltrqllpskh sffiresrsg vrhtnillrg pilrtfginy ftygfpisll
      301 alsfwsfhfa slyafgllay vgyilyvfps myhlhrlngl llvlillwav styifniaft
      361 vlskekwqdm eiwetiglwh ypipgfylla qfslgvlval snlvnnsvfl ylsdrdgpss
      421 sddsslddte etkvlivati vyglrkssra mvlmllflia lnpglipaly maffliflls
      481 hhvgtkiwqc lillceahft llyllqlnli sstlekkgsi aekilsqlgs fnhaksgdfl
      541 kiavlacfsa ihnhgfemll sfsaivqhtp cppigftilr agllksvilt vytsksrnpp
      601 einfsherki gsylntigkt flstyrscgt yivfltillt vyvvtpnyss fgylffllmw
      661 iterqlvgkt vkrlwlplkv yaiavfvfiy glsafswlqe wlsrlvklss afgynpeasm
      721 lkniweslav lvvmqlhrye rrqsknfapr ddvpetdaft flkrlliwhs ekilyltify
      781 aslspisafg fsylfglvic aissknsqip sklflvysas lvmieypfqm wgyqaemfpg
      841 qkhhsvsffl glqvyepgfl gvefglrgkv lvivacilqh svsqwfekmp snfenegwwe
      901 dscglfmste iasngdmnft rgrkcldanp llrkmkkprs yscpslktii lggmnpaggs
      961 egrnhtnghl qessndnhkw krkqihmlrk erlemqkasl kvyikfwven mfnlfglein
     1021 mialllasfs vlnaisllyi aslaacillh rdainklwli fvflfasift leymafllnl
     1081 tswmhlsptr akalcndcwr sshihfdyck kcwlgfivde prmlisyytv fmfsclklha
     1141 drlsslsgfq tykemmlhsk qvsglsdlsf etrvlwtfld ylrlysychl ldlvlalili
     1201 tgtleydvlh lgylgfalvf frirlqilkk knsifkflri ynfalivlsl ayqspfvgdf
     1261 cegkcemidr iskviglhky gfhvtsrfal veviifilvs lqsymfssle fdyvskylea
     1321 ekisalvreq ekraawktah lqhirkseeq krmrnlqvek iksemlnlli qlhslsttnc
     1381 gstfpegkik rnrnlsvnsn psqttpkkwd adlerndlsg rldllsnhdm ngsprsertv
     1441 vlceedsrqq svnslfeide lhetvngnmy shtkpqekyq skrsplasav qligdgvsqv
     1501 qslgsmavmn lasllniehe kldsydhssd devfyevenh dfggehiert hsmlsdsdrn
     1561 mfnvarrqik iifhhiwdqm rsnnnvvcyc cfiliflwnf sllsmvylvg lflyalcvnt
     1621 gpshmfwvim liytevcill qylyqiiiqh fgmifkaglf relgfpackn mssfvishwp
     1681 lflvylftll qyaitasege wtvtaefsft rknhhqeiaa ydfgffrrlk glllhlrnvm
     1741 evlirnlyry wisltqeset ppyfvqlsme vnlppgdgiq pemieskmnk llkimhdrrc
     1801 rdnlniypas rvrvqsiers pendnislvv fevlyaspsg dssfkegqrs ltpsadvtse
     1861 ileayhadif reirfpytil svigggkkdi dlyayvfcad lvvfflvaif yqsviknnse
     1921 flevyqhedq fpkefvfilm vifflivldr viylcsfata kvifylftlf lftysvtnya
     1981 wqmepsdkha gkfalraiyl tklislalqa iqirfgipne snlyrqflts sisqtnflgf
     2041 riyralpfly elrcvldwsc tttsltmydw lkledihgsl flvkcdadln rakhqqgkkq
     2101 tkltkfcsgi clffilicvi wapmlmyssg nltnianpir easvqidikt ssgrltlfet
     2161 tlceriswnk vkhehidldp qgyldnynev diqliccqpd askvwlvppv vqarfidslq
     2221 qsmdivfswq frrdrpkgke vvkhqllvad hdlpksaevm qvlngtansf rmfniypryf
     2281 rvtgsgdlrf leqlvekvsg dlvlnhgnpe wwsfqdidas sgtgccefag pvaiivseet
     2341 pqgilgdtls kfsiwglyit fvlavgrfir lqcsdlrmri qvenlpscds yvgtgclqsv
     2401 rtymlqelrv slrlkrfftg hwsafidlht ccsstlsltn yvssspiqpn fyysydfffq
     2461 alfsddskis fflglgegih skgslnylei nnckikskki hi
//
LOCUS       XP_016674113            2469 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016674113
VERSION     XP_016674113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818624.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2469
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X3"
                     /calculated_mol_wt=283805
     Region          2080..2468
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2469
                     /gene="LOC107893591"
                     /coded_by="XM_016818624.2:629..8038"
                     /db_xref="GeneID:107893591"
ORIGIN      
        1 mgkfligfvl pqllltaall nrslislvdl ltflliqyaa peigfqfprq sllswytlif
       61 ssltilshai fyivwvvkgd qwsisdaqwa kligfvrdqs ssfpsliyfl mvqvlaalva
      121 lfeisgsrfg ldsqsdsfwg hlysfvlqig shlrvlccll lpavqlivgi shpswaslpf
      181 ficssiglvd wsltsnflgl frswryllly aglnivllyi yqlpveyygi fkwladfigl
      241 ykisaksews eicsglsliv fyiilswirc dlmemdfims arassltrql lpskhsffir
      301 esrsgvrhtn illrgpilrt fginyftygf pisllalsfw sfhfaslyaf gllayvgyil
      361 yvfpsmyhlh rlnglllvli llwavstyif niaftvlske kwqdmeiwet iglwhypipg
      421 fyllaqfslg vlvalsnlvn nsvflylsdr dgpsssddss lddteetkvl ivativyglr
      481 kssramvlml lflialnpgl ipalymaffl ifllshhvgt kiwqclillc eahftllyll
      541 qlnlisstle kkgsiaekil sqlgsfnhak sgdflkiavl acfsaihnhg femllsfsai
      601 vqhtpcppig ftilragllk sviltvytsk srnppeinfs herkigsyln tigktflsty
      661 rscgtyivfl tilltvyvvt pnyssfgylf fllmwiterq lvgktvkrlw lplkvyaiav
      721 fvfiyglsaf swlqewlsrl vklssafgyn peasmlkniw eslavlvvmq lhryerrqsk
      781 nfaprddvpe tdaftflkrl liwhsekily ltifyaslsp isafgfsylf glvicaissk
      841 nsqipsklfl vysaslvmie ypfqmwgyqa emfpgqkhhs vsfflglqvy epgflgvefg
      901 lrgkvlviva cilqhsvsqw fekmpsnfen egwwedscgl fmsteiasng dmnftrgrkc
      961 ldanpllrkm kkprsyscps lktiilggmn paggsegrnh tnghlqessn dnhkwkrkqi
     1021 hmlrkerlem qkaslkvyik fwvenmfnlf gleinmiall lasfsvlnai sllyiaslaa
     1081 cillhrdain klwlifvflf asiftleyma fllnltswmh lsptrakalc ndcwrsshih
     1141 fdyckkcwlg fivdeprmli syytvfmfsc lklhadrlss lsgfqtykem mlhskqvsgl
     1201 sdlsfetrvl wtfldylrly sychlldlvl alilitgtle ydvlhlgylg falvffrirl
     1261 qilkkknsif kflriynfal ivlslayqsp fvgdfcegkc emidriskvi glhkygfhvt
     1321 srfalvevii filvslqsym fsslefdyvs kyleaekisa lvreqekraa wktahlqhir
     1381 kseeqkrmrn lqvekiksem lnlliqlhsl sttncgstfp egkikrnrnl svnsnpsqtt
     1441 pkkwdadler ndlsgrldll snhdmngspr sertvvlcee dsrqqsvnsl feidelhetv
     1501 ngnmyshtkp qekyqskrsp lasavqligd gvsqvqslgs mavmnlasll niehekldsy
     1561 dhssddevfy evenhdfgge hierthsmls dsdrnmfnva rrqikiifhh iwdqmrsnnn
     1621 vvcyccfili flwnfsllsm vylvglflya lcvntgpshm fwvimliyte vcillqylyq
     1681 iiiqhfgmif kaglfrelgf packnmssfv ishwplflvy lftllqyait asegewtvta
     1741 efsftrknhh qeiaaydfgf frrlkglllh lrnvmevlir nlyrywislt qesetppyfv
     1801 qlsmevnlpp gdgiqpemie skmnkllkim hdrrcrdnln iypasrvrvq sierspendn
     1861 islvvfevly aspsgdssfk egqrsltpsa dvtseileay hadifreirf pytilsvigg
     1921 gkkdidlyay vfcadlvvff lvaifyqsvi knnseflevy qhedqfpkef vfilmviffl
     1981 ivldrviylc sfatakvify lftlflftys vtnyawqmep sdkhagkfal raiyltklis
     2041 lalqaiqirf gipnesnlyr qfltssisqt nflgfriyra lpflyelrcv ldwsctttsl
     2101 tmydwlkled ihgslflvkc dadlnrakhq qgkkqtkltk fcsgiclffi licviwapml
     2161 myssgnltni anpireasvq idiktssgrl tlfettlcer iswnkvkheh idldpqgyld
     2221 nynevdiqli ccqpdaskvw lvppvvqarf idslqqsmdi vfswqfrrdr pkgkevvkhq
     2281 llvadhdlpk saevmqvlng tansfrmfni ypryfrvtgs gdlrfleqlv ekvsgdlvln
     2341 hgnpewwsfq didassgtgc cefagpvaii vseetpqgil gdtlskfsiw glyitfvlav
     2401 grfirlqcsd lrmriqvenl pscdrllaic ediyaaraeg eleveevlyw tlvsiyrsph
     2461 mlleytkpd
//
LOCUS       XP_040942108            2265 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040942108
VERSION     XP_040942108.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086174.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2265
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X4"
                     /calculated_mol_wt=260563
     Region          1808..2152
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2265
                     /gene="LOC107893591"
                     /coded_by="XM_041086174.1:344..7141"
                     /db_xref="GeneID:107893591"
ORIGIN      
        1 memdfimsar assltrqllp skhsffires rsgvrhtnil lrgpilrtfg inyftygfpi
       61 sllalsfwsf hfaslyafgl layvgyilyv fpsmyhlhrl nglllvlill wavstyifni
      121 aftvlskekw qdmeiwetig lwhypipgfy llaqfslgvl valsnlvnns vflylsdrdg
      181 psssddssld dteetkvliv ativyglrks sramvlmllf lialnpglip alymafflif
      241 llshhvgtki wqclillcea hftllyllql nlisstlekk gsiaekilsq lgsfnhaksg
      301 dflkiavlac fsaihnhgfe mllsfsaivq htpcppigft ilragllksv iltvytsksr
      361 nppeinfshe rkigsylnti gktflstyrs cgtyivflti lltvyvvtpn yssfgylffl
      421 lmwiterqlv gktvkrlwlp lkvyaiavfv fiyglsafsw lqewlsrlvk lssafgynpe
      481 asmlkniwes lavlvvmqlh ryerrqsknf aprddvpetd aftflkrlli whsekilylt
      541 ifyaslspis afgfsylfgl vicaisskns qipsklflvy saslvmieyp fqmwgyqaem
      601 fpgqkhhsvs fflglqvyep gflgvefglr gkvlvivaci lqhsvsqwfe kmpsnfeneg
      661 wwedscglfm steiasngdm nftrgrkcld anpllrkmkk prsyscpslk tiilggmnpa
      721 ggsegrnhtn ghlqessndn hkwkrkqihm lrkerlemqk aslkvyikfw venmfnlfgl
      781 einmiallla sfsvlnaisl lyiaslaaci llhrdainkl wlifvflfas iftleymafl
      841 lnltswmhls ptrakalcnd cwrsshihfd yckkcwlgfi vdeprmlisy ytvfmfsclk
      901 lhadrlssls gfqtykemml hskqvsglsd lsfetrvlwt fldylrlysy chlldlvlal
      961 ilitgtleyd vlhlgylgfa lvffrirlqi lkkknsifkf lriynfaliv lslayqspfv
     1021 gdfcegkcem idriskvigl hkygfhvtsr falveviifi lvslqsymfs slefdyvsky
     1081 leaekisalv reqekraawk tahlqhirks eeqkrmrnlq vekiksemln lliqlhslst
     1141 tncgstfpeg kikrnrnlsv nsnpsqttpk kwdadlernd lsgrldllsn hdmngsprse
     1201 rtvvlceeds rqqsvnslfe idelhetvng nmyshtkpqe kyqskrspla savqligdgv
     1261 sqvqslgsma vmnlasllni ehekldsydh ssddevfyev enhdfggehi erthsmlsds
     1321 drnmfnvarr qikiifhhiw dqmrsnnnvv cyccfilifl wnfsllsmvy lvglflyalc
     1381 vntgpshmfw vimliytevc illqylyqii iqhfgmifka glfrelgfpa cknmssfvis
     1441 hwplflvylf tllqyaitas egewtvtaef sftrknhhqe iaaydfgffr rlkglllhlr
     1501 nvmevlirnl yrywisltqe setppyfvql smevnlppgd giqpemiesk mnkllkimhd
     1561 rrcrdnlniy pasrvrvqsi erspendnis lvvfevlyas psgdssfkeg qrsltpsadv
     1621 tseileayha difreirfpy tilsvigggk kdidlyayvf cadlvvfflv aifyqsvikn
     1681 nseflevyqh edqfpkefvf ilmviffliv ldrviylcsf atakvifylf tlflftysvt
     1741 nyawqmepsd khagkfalra iyltklisla lqaiqirfgi pnesnlyrqf ltssisqtnf
     1801 lgfriyralp flyelrcvld wsctttsltm ydwlkledih gslflvkcda dlnrakhqqg
     1861 kkqtkltkfc sgiclffili cviwapmlmy ssgnltnian pireasvqid iktssgrltl
     1921 fettlceris wnkvkhehid ldpqgyldny nevdiqlicc qpdaskvwlv ppvvqarfid
     1981 slqqsmdivf swqfrrdrpk gkevvkhqll vadhdlpksa evmqvlngta nsfrmfniyp
     2041 ryfrvtgsgd lrfleqlvek vsgdlvlnhg npewwsfqdi dassgtgcce fagpvaiivs
     2101 eetpqgilgd tlskfsiwgl yitfvlavgr firlqcsdlr mriqvenlps cdsyvgtgcl
     2161 qsvrtymlqe lrvslrlkrf ftghwsafid lhtccsstls ltnyvssspi qpnfyysydf
     2221 ffqalfsdds kisfflglge gihskgslny leinnckiks kkihi
//
LOCUS       XP_040942109            2172 aa            linear   PLN 06-AUG-2024
DEFINITION  piezo-type mechanosensitive ion channel homolog isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_040942109
VERSION     XP_040942109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086175.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..2172
                     /product="piezo-type mechanosensitive ion channel homolog
                     isoform X5"
                     /calculated_mol_wt=249855
     Region          1715..2059
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2172
                     /gene="LOC107893591"
                     /coded_by="XM_041086175.1:126..6644"
                     /db_xref="GeneID:107893591"
ORIGIN      
        1 myhlhrlngl llvlillwav styifniaft vlskekwqdm eiwetiglwh ypipgfylla
       61 qfslgvlval snlvnnsvfl ylsdrdgpss sddsslddte etkvlivati vyglrkssra
      121 mvlmllflia lnpglipaly maffliflls hhvgtkiwqc lillceahft llyllqlnli
      181 sstlekkgsi aekilsqlgs fnhaksgdfl kiavlacfsa ihnhgfemll sfsaivqhtp
      241 cppigftilr agllksvilt vytsksrnpp einfsherki gsylntigkt flstyrscgt
      301 yivfltillt vyvvtpnyss fgylffllmw iterqlvgkt vkrlwlplkv yaiavfvfiy
      361 glsafswlqe wlsrlvklss afgynpeasm lkniweslav lvvmqlhrye rrqsknfapr
      421 ddvpetdaft flkrlliwhs ekilyltify aslspisafg fsylfglvic aissknsqip
      481 sklflvysas lvmieypfqm wgyqaemfpg qkhhsvsffl glqvyepgfl gvefglrgkv
      541 lvivacilqh svsqwfekmp snfenegwwe dscglfmste iasngdmnft rgrkcldanp
      601 llrkmkkprs yscpslktii lggmnpaggs egrnhtnghl qessndnhkw krkqihmlrk
      661 erlemqkasl kvyikfwven mfnlfglein mialllasfs vlnaisllyi aslaacillh
      721 rdainklwli fvflfasift leymafllnl tswmhlsptr akalcndcwr sshihfdyck
      781 kcwlgfivde prmlisyytv fmfsclklha drlsslsgfq tykemmlhsk qvsglsdlsf
      841 etrvlwtfld ylrlysychl ldlvlalili tgtleydvlh lgylgfalvf frirlqilkk
      901 knsifkflri ynfalivlsl ayqspfvgdf cegkcemidr iskviglhky gfhvtsrfal
      961 veviifilvs lqsymfssle fdyvskylea ekisalvreq ekraawktah lqhirkseeq
     1021 krmrnlqvek iksemlnlli qlhslsttnc gstfpegkik rnrnlsvnsn psqttpkkwd
     1081 adlerndlsg rldllsnhdm ngsprsertv vlceedsrqq svnslfeide lhetvngnmy
     1141 shtkpqekyq skrsplasav qligdgvsqv qslgsmavmn lasllniehe kldsydhssd
     1201 devfyevenh dfggehiert hsmlsdsdrn mfnvarrqik iifhhiwdqm rsnnnvvcyc
     1261 cfiliflwnf sllsmvylvg lflyalcvnt gpshmfwvim liytevcill qylyqiiiqh
     1321 fgmifkaglf relgfpackn mssfvishwp lflvylftll qyaitasege wtvtaefsft
     1381 rknhhqeiaa ydfgffrrlk glllhlrnvm evlirnlyry wisltqeset ppyfvqlsme
     1441 vnlppgdgiq pemieskmnk llkimhdrrc rdnlniypas rvrvqsiers pendnislvv
     1501 fevlyaspsg dssfkegqrs ltpsadvtse ileayhadif reirfpytil svigggkkdi
     1561 dlyayvfcad lvvfflvaif yqsviknnse flevyqhedq fpkefvfilm vifflivldr
     1621 viylcsfata kvifylftlf lftysvtnya wqmepsdkha gkfalraiyl tklislalqa
     1681 iqirfgipne snlyrqflts sisqtnflgf riyralpfly elrcvldwsc tttsltmydw
     1741 lkledihgsl flvkcdadln rakhqqgkkq tkltkfcsgi clffilicvi wapmlmyssg
     1801 nltnianpir easvqidikt ssgrltlfet tlceriswnk vkhehidldp qgyldnynev
     1861 diqliccqpd askvwlvppv vqarfidslq qsmdivfswq frrdrpkgke vvkhqllvad
     1921 hdlpksaevm qvlngtansf rmfniypryf rvtgsgdlrf leqlvekvsg dlvlnhgnpe
     1981 wwsfqdidas sgtgccefag pvaiivseet pqgilgdtls kfsiwglyit fvlavgrfir
     2041 lqcsdlrmri qvenlpscds yvgtgclqsv rtymlqelrv slrlkrfftg hwsafidlht
     2101 ccsstlsltn yvssspiqpn fyysydfffq alfsddskis fflglgegih skgslnylei
     2161 nnckikskki hi
//
LOCUS       XP_016674114             380 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At1g54790 [Gossypium hirsutum].
ACCESSION   XP_016674114
VERSION     XP_016674114.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818625.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..380
                     /product="GDSL esterase/lipase At1g54790"
                     /calculated_mol_wt=42306
     Region          29..361
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(37,109,171,342,345)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(37,342,345)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(37,109,171)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..380
                     /gene="LOC107893592"
                     /coded_by="XM_016818625.2:121..1263"
                     /db_xref="GeneID:107893592"
ORIGIN      
        1 mapkpyiflv iallfiflpl ttsihfklpa ifnfgdsnsd tgelvaagfy sleppygrsy
       61 ftkpsgrycd grliidflle amdlpflnay ldsigrtsfr kgcnfaaags tiepptarav
      121 spfsfrvqva qfirfkhqvl rlmakgkklh kylpdedyfq nglymfdigq ndlagafysk
      181 tfdqilalip liltefetgi ktlydqgakn fwvhntgplg claqnvakfg tdpssldelg
      241 cvskhnqaak vfnlqlhtlc kklqgryads nftyvdiyti kwnlianysk fgfdqpimvc
      301 cgyggpplny dsrigcgkte vlngttmtak acsdsseyvn wdgihyseaa nqyvssqils
      361 gkysdppfsd kmpfllglkf
//
LOCUS       XP_016674115             307 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate mutase-like protein AT74 [Gossypium hirsutum].
ACCESSION   XP_016674115
VERSION     XP_016674115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818626.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..307
                     /product="phosphoglycerate mutase-like protein AT74"
                     /calculated_mol_wt=36014
     Region          19..228
                     /region_name="PhoE"
                     /note="Broad specificity phosphatase PhoE [Carbohydrate
                     transport and metabolism]; COG0406"
                     /db_xref="CDD:440175"
     CDS             1..307
                     /gene="LOC107893593"
                     /coded_by="XM_016818626.2:1..924"
                     /db_xref="GeneID:107893593"
ORIGIN      
        1 mknveakqke kiqnlkmlpk hiilvrhges egnkdtsays tipdhkislt ehgraqarla
       61 gsrlrdliss hgssqdwrvy fyvspyertr stlreigksf skkrvigvre ecrireqdfg
      121 nfqveermka tketrekfgr ffyrfpeges aadvfdrvss fleslwrdid lnrlnndpsq
      181 dlnliiishg lasrvflmkw fkwtveqfer lynpgnceir vmelgrggey slaihhtdee
      241 lrewglspem iedqkwrina nktdlndhck wylnsffdne ldsdedvkee didsdddskd
      301 ifldtds
//
LOCUS       XP_040942110             685 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 20 [Gossypium hirsutum].
ACCESSION   XP_040942110
VERSION     XP_040942110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086176.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..685
                     /product="ABC transporter G family member 20"
                     /calculated_mol_wt=75598
     Region          26..684
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..685
                     /gene="LOC107894558"
                     /coded_by="XM_041086176.1:160..2217"
                     /db_xref="GeneID:107894558"
ORIGIN      
        1 meivelpcee hhqildvhia gssyppfvls fknltydvkv stksgfpfrw kkpnvssgnt
       61 tksllrgisg eakegetmai lgasgsgkst lidalanris kqslkgsitl ngevldsdvl
      121 kvisayvmqd dllfpmltve etlmfsaefr lprsvskskk karvqalidq lglrnaaktv
      181 igdeghrgvs ggerrrvsig idiihdpill fldeptsgld stsafmvvkv lqriaesgsv
      241 vimsihqpss rilglidrli ilsqgrtlys gspsnlpqff sdfghpipnn enpsefaldl
      301 irelegtssg tqilfefnks wkassmddng ggdtisnrry tlplkdaiak sisrgklvfg
      361 gnganhsssv psfanpfyie lmvlskrllt nsrrmpakfa vrlgtiivtg ivlatmfwql
      421 ddspagaqer lgcisisiat iffncitevp tfiqeryifm retaynayrr ssyvlarslt
      481 hipllfnlsv tlslitfwtv glaggvpgfl fffvtilasf wagssfaafi sglipdvfla
      541 fvsgiaivsy flflcgflva rdrlpkywlw fhyislvkyp yeailqnefl dptkcfvlgv
      601 qlfdqsalat lpapvksell kslgrvvgrn itsstclttg kdilkqqgiv elskwkcvwv
      661 tvawgfffri lfyltllfgs knkrk
//
LOCUS       XP_016675725             173 aa            linear   PLN 06-AUG-2024
DEFINITION  serotonin N-acetyltransferase 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016675725
VERSION     XP_016675725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..173
                     /product="serotonin N-acetyltransferase 2, chloroplastic"
                     /calculated_mol_wt=19445
     Region          <85..163
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
     CDS             1..173
                     /gene="LOC107895041"
                     /coded_by="XM_016820236.2:232..753"
                     /db_xref="GeneID:107895041"
ORIGIN      
        1 mfsrgiisnf rtptlpfptc kfsvsdkdle srgfflrrti sdlnldhlns vfvavgfprr
       61 dtekiklale htqsilwveh kksqkpvafa ratgdgvfna iiwdvvvdps fqgiglgkav
      121 merlveelle kgicnialys eprvlgfyrp lgfvadpdgi rgmvysrkqk kkk
//
LOCUS       XP_016675726             599 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperonin 60 subunit beta 4, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016675726
VERSION     XP_016675726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..599
                     /product="chaperonin 60 subunit beta 4, chloroplastic"
                     /calculated_mol_wt=65092
     Region          1..564
                     /region_name="chaperonin_like"
                     /note="chaperonin_like superfamily. Chaperonins are
                     involved in productive folding of proteins. They share a
                     common general morphology, a double toroid of 2 stacked
                     rings, each composed of 7-9 subunits. There are 2 main
                     chaperonin groups. The symmetry of type I...; cl02777"
                     /db_xref="CDD:351886"
     Site            order(40,44,63,74..77,79,84..85,87,97,99,107,111,114,234,
                     266,294,421,423,498,553,556..562)
                     /site_type="other"
                     /note="ring oligomerisation interface [polypeptide
                     binding]"
                     /db_xref="CDD:239460"
     Site            order(69..71,125,129,187,435,452,493,533,535)
                     /site_type="other"
                     /note="ATP/Mg binding site [chemical binding]"
                     /db_xref="CDD:239460"
     Site            order(147,473,491,500,502..503,506)
                     /site_type="active"
                     /note="stacking interactions [active]"
                     /db_xref="CDD:239460"
     Site            order(179,223,230,412,446..447)
                     /site_type="other"
                     /note="hinge regions"
                     /db_xref="CDD:239460"
     CDS             1..599
                     /gene="LOC107895043"
                     /coded_by="XM_016820237.2:123..1922"
                     /db_xref="GeneID:107895043"
ORIGIN      
        1 macssspipg isftkptlsk trrlssshys iskkpramak evyfnhdgsa tkklqtgvdk
       61 vaeligvtlg pkgrnvvlqn kygppkivnd getvlkqiel edplenvgak lvrqagaktn
      121 dlagdgctts ivlahglite gvkvvsagmn pvqiargiek tanalvselk lisrevedhe
      181 lahvaavsag ndyavgkmis daiqqvgrkg vvkiekgkgt enslemvegm qfergylspy
      241 fvtdrdkmiv efhnckfllv dkkitnpkem fkildsavke kypvvivaed iekealapvi
      301 rnklkgvlka aaikapafge rkshcledia iltggtvird dmgltldrvg kevlgtatkv
      361 vitkdstyiv sdggtreavq krvsqiqnlv enteenfqkk ilneriarls ggiailqvga
      421 qtqvelkdkq lriedalnat kaaieegvvv gggcillrls ekvdsiknll dnqeqkigae
      481 ifkralsypt kliaknagin gsvvvekvls nndtrygyna arnsyedlmk agimdptkvv
      541 rcslehaasv akvfltsdav vvdivdnmdi kfkpkltrkk iqsltkslfp knlfprfsk
//
LOCUS       XP_016675728             197 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 43 [Gossypium hirsutum].
ACCESSION   XP_016675728
VERSION     XP_016675728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820239.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..197
                     /product="basic leucine zipper 43"
                     /calculated_mol_wt=22345
     Region          83..134
                     /region_name="bZIP_plant_GBF1"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; cd14702"
                     /db_xref="CDD:269850"
     Region          83..134
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269850"
     Site            order(86..87,89..91,93..98,100..102)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     Site            order(101,104..105,108..109,111..112,115..116,118..119,
                     122..123,125..126,129..130,132..133)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269850"
     CDS             1..197
                     /gene="LOC107895044"
                     /coded_by="XM_016820239.2:101..694"
                     /db_xref="GeneID:107895044"
ORIGIN      
        1 mvpgelrglh ylapenpili panlgmmqns ipsfhfntfe sslpnshivp saqefaalss
       61 sisntstsde aeeqqvyvid erkqrrmisn resarrsrmr kqkhldelws qvirlrnenq
      121 slldklnhvs eshdrvlqen arlkeeasdl rqmltdlkig spyslsfrdl eevpcntahl
      181 kaestnqsia nsvdllh
//
LOCUS       XP_016738462             165 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016738462
VERSION     XP_016738462.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016882973.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016738462.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..165
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18466
     Region          24..96
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,42,79,81,83,90)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..165
                     /gene="LOC107948432"
                     /coded_by="XM_016882973.2:288..785"
                     /db_xref="GeneID:107948432"
ORIGIN      
        1 mgqvldkfhg kewrkrqirk isdkvfervk nqsgratltf edlyiavllv yndinkrlpg
       61 phfdppskdq irsmmqecdl nldgqinhde fvkfiqkltt dtlvvvsqgl lvtlvvaptv
      121 amatkkateg vpgvgkvvqk lpnsiyaslv tlaivwfqts regie
//
LOCUS       XP_040942111             228 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942111
VERSION     XP_040942111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086177.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..228
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25302
     Region          <165..226
                     /region_name="SecA"
                     /note="Preprotein translocase subunit SecA (ATPase, RNA
                     helicase) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG0653"
                     /db_xref="CDD:440418"
     CDS             1..228
                     /gene="LOC107894842"
                     /coded_by="XM_041086177.1:128..814"
                     /db_xref="GeneID:107894842"
ORIGIN      
        1 mkkmlasrfa tsiskrnlsa ssffgysypd crliltphrs ifttspvqfs wmdsikgvft
       61 gkkaspddpn isaesftllr fadelknark lgkfkqyvvg rssdatfadv fekqeaiiry
      121 lggcdptgmn lqpsqkkeaa kqcdctlldv enalakftwa keahqkmaql keegkpmpks
      181 faevqklmgs tpldharsnm aksgqisrna lcpcgskkry krccgkdq
//
LOCUS       XP_016674123             761 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 48 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674123
VERSION     XP_016674123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818634.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="WD repeat-containing protein 48 isoform X1"
                     /calculated_mol_wt=83298
     Region          34..328
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(34,57,61,67..68,82..83,100,104,110..111,124..125,
                     143,148,154..155,178,195,199..200,216..217,235,239,
                     245..246,258..259,276,281,287..288,300..301,319,323)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..179
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..>456
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          634..756
                     /region_name="Ubl_WDR48"
                     /note="Ubiquitin-like (Ubl) domain found in WD
                     repeat-containing protein 48 (WDR48) and similar proteins;
                     cd17041"
                     /db_xref="CDD:340561"
     Site            order(634..637,639,657..659,664,668)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:340561"
     CDS             1..761
                     /gene="LOC107893602"
                     /coded_by="XM_016818634.2:191..2476"
                     /db_xref="GeneID:107893602"
ORIGIN      
        1 mhrvssvgnn ansnrprkek rlryvlsdtd dtkhcaginc lavlkssfsd gcnylftgsr
       61 dgtlkrwald ddaatcsatf eshvdwvndt viagdntlvs cssdttlktw nclsdgicts
      121 tlrqhsdyvt claaaekntn vvasgglgge vfvwdieaav tplskssdvl edncsnging
      181 sanslsissl rtisssnsia aqtaqchgyv picakghkes vyalaindsg sllvsggtek
      241 vvrvwdprtg lktmklrght dnirallmds tgryclsgss dsmirlwdlg qqrcvhsyav
      301 hmdsvwalas tptfshvysg grdlslyltd lttreslllc tkehpilqla lhgdsiwvat
      361 tdssvhrwpa egknpqkvfq rggsflagnl sfsrarvsle gstpapvyke piftipgtpa
      421 ivhyeilnnr rhvltkdtag svklweitkg vviedygqvs fdekkeqlfe mvsipawfsv
      481 dtrlgslsvh ldtpqcfsae mysadlnitg kpeddkvnla retlkgllah wmtkrrqrlg
      541 sqasvngdvl sgkdittksl thsrievdvn aendsmvyps fefstvspps iitegsqggp
      601 wrkkiteldg tedekdfpgw vldcvlsnkl pprentkcsf ylypcegsav qiltqgklsa
      661 prilrihkvv nyvvekldkp sdnantdgtf spglggrlqh lvvgdgsfrs glkpwqkprp
      721 sveilcnnqv lspdmslatv rayvwkkped lvlnyrviqg r
//
LOCUS       XP_016674124             761 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 48 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016674124
VERSION     XP_016674124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818635.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..761
                     /product="WD repeat-containing protein 48 isoform X1"
                     /calculated_mol_wt=83298
     Region          34..328
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(34,57,61,67..68,82..83,100,104,110..111,124..125,
                     143,148,154..155,178,195,199..200,216..217,235,239,
                     245..246,258..259,276,281,287..288,300..301,319,323)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..179
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..>456
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          634..756
                     /region_name="Ubl_WDR48"
                     /note="Ubiquitin-like (Ubl) domain found in WD
                     repeat-containing protein 48 (WDR48) and similar proteins;
                     cd17041"
                     /db_xref="CDD:340561"
     Site            order(634..637,639,657..659,664,668)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:340561"
     CDS             1..761
                     /gene="LOC107893602"
                     /coded_by="XM_016818635.2:301..2586"
                     /db_xref="GeneID:107893602"
ORIGIN      
        1 mhrvssvgnn ansnrprkek rlryvlsdtd dtkhcaginc lavlkssfsd gcnylftgsr
       61 dgtlkrwald ddaatcsatf eshvdwvndt viagdntlvs cssdttlktw nclsdgicts
      121 tlrqhsdyvt claaaekntn vvasgglgge vfvwdieaav tplskssdvl edncsnging
      181 sanslsissl rtisssnsia aqtaqchgyv picakghkes vyalaindsg sllvsggtek
      241 vvrvwdprtg lktmklrght dnirallmds tgryclsgss dsmirlwdlg qqrcvhsyav
      301 hmdsvwalas tptfshvysg grdlslyltd lttreslllc tkehpilqla lhgdsiwvat
      361 tdssvhrwpa egknpqkvfq rggsflagnl sfsrarvsle gstpapvyke piftipgtpa
      421 ivhyeilnnr rhvltkdtag svklweitkg vviedygqvs fdekkeqlfe mvsipawfsv
      481 dtrlgslsvh ldtpqcfsae mysadlnitg kpeddkvnla retlkgllah wmtkrrqrlg
      541 sqasvngdvl sgkdittksl thsrievdvn aendsmvyps fefstvspps iitegsqggp
      601 wrkkiteldg tedekdfpgw vldcvlsnkl pprentkcsf ylypcegsav qiltqgklsa
      661 prilrihkvv nyvvekldkp sdnantdgtf spglggrlqh lvvgdgsfrs glkpwqkprp
      721 sveilcnnqv lspdmslatv rayvwkkped lvlnyrviqg r
//
LOCUS       XP_016674125             748 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 48 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016674125
VERSION     XP_016674125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818636.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..748
                     /product="WD repeat-containing protein 48 isoform X2"
                     /calculated_mol_wt=81687
     Region          34..328
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(34,57,61,67..68,82..83,100,104,110..111,124..125,
                     143,148,154..155,178,195,199..200,216..217,235,239,
                     245..246,258..259,276,281,287..288,300..301,319,323)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..179
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..>456
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          621..743
                     /region_name="Ubl_WDR48"
                     /note="Ubiquitin-like (Ubl) domain found in WD
                     repeat-containing protein 48 (WDR48) and similar proteins;
                     cd17041"
                     /db_xref="CDD:340561"
     Site            order(621..624,626,644..646,651,655)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:340561"
     CDS             1..748
                     /gene="LOC107893602"
                     /coded_by="XM_016818636.2:188..2434"
                     /db_xref="GeneID:107893602"
ORIGIN      
        1 mhrvssvgnn ansnrprkek rlryvlsdtd dtkhcaginc lavlkssfsd gcnylftgsr
       61 dgtlkrwald ddaatcsatf eshvdwvndt viagdntlvs cssdttlktw nclsdgicts
      121 tlrqhsdyvt claaaekntn vvasgglgge vfvwdieaav tplskssdvl edncsnging
      181 sanslsissl rtisssnsia aqtaqchgyv picakghkes vyalaindsg sllvsggtek
      241 vvrvwdprtg lktmklrght dnirallmds tgryclsgss dsmirlwdlg qqrcvhsyav
      301 hmdsvwalas tptfshvysg grdlslyltd lttreslllc tkehpilqla lhgdsiwvat
      361 tdssvhrwpa egknpqkvfq rggsflagnl sfsrarvsle gstpapvyke piftipgtpa
      421 ivhyeilnnr rhvltkdtag svklweitkg vviedygqvs ipawfsvdtr lgslsvhldt
      481 pqcfsaemys adlnitgkpe ddkvnlaret lkgllahwmt krrqrlgsqa svngdvlsgk
      541 dittkslths rievdvnaen dsmvypsfef stvsppsiit egsqggpwrk kiteldgted
      601 ekdfpgwvld cvlsnklppr entkcsfyly pcegsavqil tqgklsapri lrihkvvnyv
      661 vekldkpsdn antdgtfspg lggrlqhlvv gdgsfrsglk pwqkprpsve ilcnnqvlsp
      721 dmslatvray vwkkpedlvl nyrviqgr
//
LOCUS       XP_016674126             699 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 48 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016674126
VERSION     XP_016674126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818637.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..699
                     /product="WD repeat-containing protein 48 isoform X3"
                     /calculated_mol_wt=77470
     Region          34..328
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(34,57,61,67..68,82..83,100,104,110..111,124..125,
                     143,148,154..155,178,195,199..200,216..217,235,239,
                     245..246,258..259,276,281,287..288,300..301,319,323)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..179
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          222..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          452..516
                     /region_name="gag_pre-integrs"
                     /note="GAG-pre-integrase domain; pfam13976"
                     /db_xref="CDD:372857"
     Region          <518..641
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     CDS             1..699
                     /gene="LOC107893602"
                     /coded_by="XM_016818637.2:188..2287"
                     /db_xref="GeneID:107893602"
ORIGIN      
        1 mhrvssvgnn ansnrprkek rlryvlsdtd dtkhcaginc lavlkssfsd gcnylftgsr
       61 dgtlkrwald ddaatcsatf eshvdwvndt viagdntlvs cssdttlktw nclsdgicts
      121 tlrqhsdyvt claaaekntn vvasgglgge vfvwdieaav tplskssdvl edncsnging
      181 sanslsissl rtisssnsia aqtaqchgyv picakghkes vyalaindsg sllvsggtek
      241 vvrvwdprtg lktmklrght dnirallmds tgryclsgss dsmirlwdlg qqrcvhsyav
      301 hmdsvwalas tptfshvysg grdlslyltd lttreslllc tkehpilqla lhgdsiwvat
      361 tdssvhrwpa egknpqkvfq rggsflagnl sfsrarvsle gstpapvyke piftipgtpa
      421 ivhyeilnnr rhvltkeqes gkmigttkvn dglyvwnkns sqegmalsts kddpimlwhr
      481 rlghpnfmyl kklfpllfln kkisslncev cqlskhirvp yplkpyvqsq pfslihsdlw
      541 gasrvknitg arwfitfidd htrvcwvyll keksevsrvf knfhsmirtq lnsnihtlrt
      601 dngreyfnsi lspylseqgi ihqsscpntp qqngvserkn rhlvavahal mftmgvpkyl
      661 wgeavltacy linrlpskvl nfqtpfhtfq kkislvscs
//
LOCUS       XP_016674210             510 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674210
VERSION     XP_016674210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818721.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..510
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=57804
     Region          244..292
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(245,279..280,282..283,285..287,289..291)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..510
                     /gene="LOC107893668"
                     /coded_by="XM_016818721.2:738..2270"
                     /db_xref="GeneID:107893668"
ORIGIN      
        1 mgfkrpfdde dlqelpfknr rqfgydnklt rfadttphve veggfhkhqw yeefksdaln
       61 dvahlvdedf etsaplslvt stsseedist gvtaispvss eyfdfdfprr tfspveddyy
      121 llldrsprkq vplgpnhqan vpswgrhikn ikfaqneask aadidnednk mgtciiplpd
      181 ldlsanssdk vgagrfdcsc ldrgslrcvq qhvtearkll rkslghekfv klgfynmged
      241 vaykwseede eifrevvytn pvslgkkfwk hlsvvfpsrs krelvsyyfn vfilqrravq
      301 nrsssldids dddelcgnqp sykvqaleed edsaieslad medqandddd ndvdddsgds
      361 dgdnyvgyys saatredygi nlpykgpvtk sfdkswfdpv fqpmdkvfgt vedfnvqeds
      421 cmsfefqpnm vdshclvdtk anlhaggmkt eisqslqgkl ddsselvsnv ylldnydaki
      481 wdtrysttst kgidlqptcn iieeifgqdt
//
LOCUS       XP_016674211             510 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674211
VERSION     XP_016674211.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818722.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..510
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=57804
     Region          244..292
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(245,279..280,282..283,285..287,289..291)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..510
                     /gene="LOC107893668"
                     /coded_by="XM_016818722.2:653..2185"
                     /db_xref="GeneID:107893668"
ORIGIN      
        1 mgfkrpfdde dlqelpfknr rqfgydnklt rfadttphve veggfhkhqw yeefksdaln
       61 dvahlvdedf etsaplslvt stsseedist gvtaispvss eyfdfdfprr tfspveddyy
      121 llldrsprkq vplgpnhqan vpswgrhikn ikfaqneask aadidnednk mgtciiplpd
      181 ldlsanssdk vgagrfdcsc ldrgslrcvq qhvtearkll rkslghekfv klgfynmged
      241 vaykwseede eifrevvytn pvslgkkfwk hlsvvfpsrs krelvsyyfn vfilqrravq
      301 nrsssldids dddelcgnqp sykvqaleed edsaieslad medqandddd ndvdddsgds
      361 dgdnyvgyys saatredygi nlpykgpvtk sfdkswfdpv fqpmdkvfgt vedfnvqeds
      421 cmsfefqpnm vdshclvdtk anlhaggmkt eisqslqgkl ddsselvsnv ylldnydaki
      481 wdtrysttst kgidlqptcn iieeifgqdt
//
LOCUS       XP_016674212             509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674212
VERSION     XP_016674212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818723.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..509
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=57705
     Region          243..291
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(244,278..279,281..282,284..286,288..290)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..509
                     /gene="LOC107893668"
                     /coded_by="XM_016818723.2:794..2323"
                     /db_xref="GeneID:107893668"
ORIGIN      
        1 mgfkrpfdde dlqelpfknr rqfgydnklt rfadttphev eggfhkhqwy eefksdalnd
       61 vahlvdedfe tsaplslvts tsseedistg vtaispvsse yfdfdfprrt fspveddyyl
      121 lldrsprkqv plgpnhqanv pswgrhikni kfaqneaska adidnednkm gtciiplpdl
      181 dlsanssdkv gagrfdcscl drgslrcvqq hvtearkllr kslghekfvk lgfynmgedv
      241 aykwseedee ifrevvytnp vslgkkfwkh lsvvfpsrsk relvsyyfnv filqrravqn
      301 rsssldidsd ddelcgnqps ykvqaleede dsaiesladm edqanddddn dvdddsgdsd
      361 gdnyvgyyss aatredygin lpykgpvtks fdkswfdpvf qpmdkvfgtv edfnvqedsc
      421 msfefqpnmv dshclvdtka nlhaggmkte isqslqgkld dsselvsnvy lldnydakiw
      481 dtrysttstk gidlqptcni ieeifgqdt
//
LOCUS       XP_016674213             509 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674213
VERSION     XP_016674213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..509
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=57705
     Region          243..291
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(244,278..279,281..282,284..286,288..290)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..509
                     /gene="LOC107893668"
                     /coded_by="XM_016818724.2:648..2177"
                     /db_xref="GeneID:107893668"
ORIGIN      
        1 mgfkrpfdde dlqelpfknr rqfgydnklt rfadttphev eggfhkhqwy eefksdalnd
       61 vahlvdedfe tsaplslvts tsseedistg vtaispvsse yfdfdfprrt fspveddyyl
      121 lldrsprkqv plgpnhqanv pswgrhikni kfaqneaska adidnednkm gtciiplpdl
      181 dlsanssdkv gagrfdcscl drgslrcvqq hvtearkllr kslghekfvk lgfynmgedv
      241 aykwseedee ifrevvytnp vslgkkfwkh lsvvfpsrsk relvsyyfnv filqrravqn
      301 rsssldidsd ddelcgnqps ykvqaleede dsaiesladm edqanddddn dvdddsgdsd
      361 gdnyvgyyss aatredygin lpykgpvtks fdkswfdpvf qpmdkvfgtv edfnvqedsc
      421 msfefqpnmv dshclvdtka nlhaggmkte isqslqgkld dsselvsnvy lldnydakiw
      481 dtrysttstk gidlqptcni ieeifgqdt
//
LOCUS       XP_016674215             481 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674215
VERSION     XP_016674215.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818726.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..481
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52480
     Region          9..32
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          100..124
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          413..435
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..481
                     /gene="LOC107893669"
                     /coded_by="XM_016818726.2:538..1983"
                     /db_xref="GeneID:107893669"
ORIGIN      
        1 meqnqgkkfv ckfcnkgypc gkslgghirt hmntenlgea eekaeisinn qqlfcsrnik
       61 raaeaeaggg qsatydlren pkkskrfsdl gngsvlkemi ckecgkgfqs lkalcghmac
      121 hsdkervfqk ledhwgntek qklvvdsqsd teistpsrrr rskrirckig gvysnnsvsl
      181 angsssvsei eeqeqeevam clmmlsrdsg ckkglnsvad ssdnnsvvle aksssidlri
      241 tvknanngge llkmkkqgvi klkssgsgpc sensdsgyfr ngpkkvepdv ssngvtnnve
      301 ckklkvksrs gfedfdatlg knrskfkyvk tefpkdlvse vgdnqddral tkyglrsgkk
      361 dyssspkgtk lesihdrged slangsfhap maatklsngn aekrlgskkn kghvcpfcfr
      421 vfksgqalgg hkrshfaggs eettlvikqd spdmplpali dlnlpaslee damensgfip
      481 w
//
LOCUS       XP_040942112             310 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 57 [Gossypium hirsutum].
ACCESSION   XP_040942112
VERSION     XP_040942112.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086178.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..310
                     /product="probable WRKY transcription factor 57"
                     /calculated_mol_wt=33543
     Region          168..225
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..310
                     /gene="LOC107893670"
                     /coded_by="XM_041086178.1:460..1392"
                     /db_xref="GeneID:107893670"
ORIGIN      
        1 medkegldpa gtefksdsss swtlagpdsv sdsinyffdr essilsefgw nilqpdhade
       61 ierfgeldrt dasrglagnc sgsqsqscga aggvgdscsg aasnpvgsae vptsnpsvss
      121 sssedppeks tgfggkppei pskvrkkgqk rirqprfafm tksevdhled gyrwrkygqk
      181 avknspfprs yyrctnskct vkkrversse dptivittye gqhchhsvgf prgglishea
      241 afagqftpgv sqfyysqgvq lhrgispstt qsqqlpievr esralpepts qlpkdegllg
      301 divppgmrrt
//
LOCUS       XP_040942113             310 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 57 [Gossypium hirsutum].
ACCESSION   XP_040942113
VERSION     XP_040942113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086179.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..310
                     /product="probable WRKY transcription factor 57"
                     /calculated_mol_wt=33543
     Region          168..225
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..310
                     /gene="LOC107893670"
                     /coded_by="XM_041086179.1:448..1380"
                     /db_xref="GeneID:107893670"
ORIGIN      
        1 medkegldpa gtefksdsss swtlagpdsv sdsinyffdr essilsefgw nilqpdhade
       61 ierfgeldrt dasrglagnc sgsqsqscga aggvgdscsg aasnpvgsae vptsnpsvss
      121 sssedppeks tgfggkppei pskvrkkgqk rirqprfafm tksevdhled gyrwrkygqk
      181 avknspfprs yyrctnskct vkkrversse dptivittye gqhchhsvgf prgglishea
      241 afagqftpgv sqfyysqgvq lhrgispstt qsqqlpievr esralpepts qlpkdegllg
      301 divppgmrrt
//
LOCUS       XP_016674520             521 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g37320 [Gossypium
            hirsutum].
ACCESSION   XP_016674520
VERSION     XP_016674520.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674520.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..521
                     /product="pentatricopeptide repeat-containing protein
                     At2g37320"
                     /calculated_mol_wt=58244
     Region          <119..520
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          132..154
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          162..189
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          193..220
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          263..290
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          295..322
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          328..357
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          363..389
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..521
                     /gene="LOC107893892"
                     /coded_by="XM_016819031.2:153..1718"
                     /db_xref="GeneID:107893892"
ORIGIN      
        1 mnilffksii qrnswftlks vvfflsqssp fssyklklnp psnklnralr ikdifissks
       61 thftsrqnhl rliqdfletd sdqftaqncf ndlgfsdspt enlpvffnei lkppctnken
      121 skfnpivlsn alsscgskhn lcggiqyhcl aiktgvfsnv yvgsslvafy gksgelekay
      181 kafeempvkn vvswttiiag faqgwqidmc lelynmmkns tlkpndftlt sllractgsg
      241 algqgrsahc qviqmgfdsy iyicnalism yckcgsieda ififekmagn kdivswnsmi
      301 agyaqhgfam eavelygkmk dekikldait flgvlssyrh aglveqgcac fdsmiihgvk
      361 pamdhyscvv dllgragllq ealdfilkmp irpnaviwgs llsscrlhgn iwigikaaes
      421 rlllepecaa thvqlaslya sakrwdeaar vrkvmkdrgl ktitgyswie iknelyrfra
      481 edksntkvkg ilgvlsclvd hmkilgyvle mpeediddtf f
//
LOCUS       XP_016674521             229 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016674521
VERSION     XP_016674521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819032.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..229
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25871
     Region          150..226
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..229
                     /gene="LOC107893894"
                     /coded_by="XM_016819032.2:238..927"
                     /db_xref="GeneID:107893894"
ORIGIN      
        1 mnilrnaikl hvsvrtvkpt hvlpsflrep pkrfstepdq qqqqplpdas inqfldsask
       61 gfvygklfgi tkytmksdii sllegcnltp ddikvsysrs lfpvammlrf pspsafsnaa
      121 rtirrfdrly rldrvdtsdw divmpyngkt vvlqglprsa aledverfls gceydsssiq
      181 tvtftrpgft nlvrlttvqf pshieamnac isknrkicln nqisvrvly
//
LOCUS       XP_040942114             213 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942114
VERSION     XP_040942114.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086180.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..213
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=24048
     Region          135..210
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..213
                     /gene="LOC107893894"
                     /coded_by="XM_041086180.1:238..879"
                     /db_xref="GeneID:107893894"
ORIGIN      
        1 mnilrnaikl hvsvrtvkpt hvlpsflrep pkrfstepdq qqqqplpdas inqfldsask
       61 gfvygklfgi tkytmksdii sllegcnltp ddikvsysrs lfpvammlrf pspsafsnaa
      121 rtirrfdrly rldrvvlqgl prsaaledve rflsgceyds ssiqtvtftr pgftnlvrlt
      181 tvqfpshiea mnacisknrk iclnnqisvr vly
//
LOCUS       XP_040942115             748 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HASTY 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942115
VERSION     XP_040942115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086181.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..748
                     /product="protein HASTY 1 isoform X1"
                     /calculated_mol_wt=83059
     Region          41..728
                     /region_name="Exportin-5"
                     /note="Exportin-5 family; pfam19273"
                     /db_xref="CDD:437105"
     CDS             1..748
                     /gene="LOC107893603"
                     /coded_by="XM_041086181.1:683..2929"
                     /db_xref="GeneID:107893603"
ORIGIN      
        1 mkvttslwnm yvkvwclwvp qicnvlleia lhshsiysrc lgffqhfkla lhyqslqfwl
       61 vllrdamskp klsvhssgdg ltatnvdstl aqvdeekrki lsflnddics tildisfqrm
      121 lkkeklmtet alspgilelw sddfegkgdf gqyrsrlfel ikfiasnkpl vagakvseri
      181 imiiksllns pmpsqdlavm esmqmalenv visifdgsne faggssevhl alcrifegll
      241 rellslnrte palvevlghy leamgpflky fadavasvin klfellnslp fivkdpstrg
      301 arharlqict sfiriakaad ksilphmkll rgihslwsps vfqmlpgeik aamsmsdveq
      361 ssllgggnpk lskgaltfvd gsqfdmnkeg yikpneadiq nwlkgirdsg ynvlglstti
      421 gdpffkcidi dfvsltlien iqsmefrhtr llvhsilill ikscpldmwe vwlerllhpl
      481 fihcqqalsc swssllhegr akvpdnhgil tgsdlkvevm eetllrdltr eicsllstia
      541 spglnaslps lehaghvgrv dtsslkdlda fasssmvnfl lkhkslaipv lqisleafsw
      601 tdseavtkvc afsaavvlla iftnnvdlre yvsrdlfsav iqglalesna visadlvsls
      661 rdifiylcnr dpgpwkills lpcispndlh afeealtkta spkeqkqlmk sflllatgnn
      721 lkalaaqkcv niitnvtdkh sifhcstl
//
LOCUS       XP_040942116             748 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HASTY 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942116
VERSION     XP_040942116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086182.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..748
                     /product="protein HASTY 1 isoform X1"
                     /calculated_mol_wt=83059
     Region          41..728
                     /region_name="Exportin-5"
                     /note="Exportin-5 family; pfam19273"
                     /db_xref="CDD:437105"
     CDS             1..748
                     /gene="LOC107893603"
                     /coded_by="XM_041086182.1:173..2419"
                     /db_xref="GeneID:107893603"
ORIGIN      
        1 mkvttslwnm yvkvwclwvp qicnvlleia lhshsiysrc lgffqhfkla lhyqslqfwl
       61 vllrdamskp klsvhssgdg ltatnvdstl aqvdeekrki lsflnddics tildisfqrm
      121 lkkeklmtet alspgilelw sddfegkgdf gqyrsrlfel ikfiasnkpl vagakvseri
      181 imiiksllns pmpsqdlavm esmqmalenv visifdgsne faggssevhl alcrifegll
      241 rellslnrte palvevlghy leamgpflky fadavasvin klfellnslp fivkdpstrg
      301 arharlqict sfiriakaad ksilphmkll rgihslwsps vfqmlpgeik aamsmsdveq
      361 ssllgggnpk lskgaltfvd gsqfdmnkeg yikpneadiq nwlkgirdsg ynvlglstti
      421 gdpffkcidi dfvsltlien iqsmefrhtr llvhsilill ikscpldmwe vwlerllhpl
      481 fihcqqalsc swssllhegr akvpdnhgil tgsdlkvevm eetllrdltr eicsllstia
      541 spglnaslps lehaghvgrv dtsslkdlda fasssmvnfl lkhkslaipv lqisleafsw
      601 tdseavtkvc afsaavvlla iftnnvdlre yvsrdlfsav iqglalesna visadlvsls
      661 rdifiylcnr dpgpwkills lpcispndlh afeealtkta spkeqkqlmk sflllatgnn
      721 lkalaaqkcv niitnvtdkh sifhcstl
//
LOCUS       XP_040942117             746 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HASTY 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942117
VERSION     XP_040942117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086183.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..746
                     /product="protein HASTY 1 isoform X2"
                     /calculated_mol_wt=82832
     Region          41..726
                     /region_name="Exportin-5"
                     /note="Exportin-5 family; pfam19273"
                     /db_xref="CDD:437105"
     CDS             1..746
                     /gene="LOC107893603"
                     /coded_by="XM_041086183.1:683..2923"
                     /db_xref="GeneID:107893603"
ORIGIN      
        1 mkvttslwnm yvkvwclwvp qicnvlleia lhshsiysrc lgffqhfkla lhyqslqfwl
       61 vllrdamskp klsvhssgdg ltatnvdstl aqvdeekrki lsflnddics tildisfqrm
      121 lkkeklmtet alspgilelw sddfegkgdf gqyrsrlfel ikfiasnkpl vagakvseri
      181 imiiksllns pmpsqdlavm esmqmalenv visifdgsne faggssevhl alcrifegll
      241 rellslnrte palvevlghy leamgpflky fadavasvin klfellnslp fidpstrgar
      301 harlqictsf iriakaadks ilphmkllrg ihslwspsvf qmlpgeikaa msmsdveqss
      361 llgggnpkls kgaltfvdgs qfdmnkegyi kpneadiqnw lkgirdsgyn vlglsttigd
      421 pffkcididf vsltlieniq smefrhtrll vhsilillik scpldmwevw lerllhplfi
      481 hcqqalscsw ssllhegrak vpdnhgiltg sdlkvevmee tllrdltrei csllstiasp
      541 glnaslpsle haghvgrvdt sslkdldafa sssmvnfllk hkslaipvlq isleafswtd
      601 seavtkvcaf saavvllaif tnnvdlreyv srdlfsaviq glalesnavi sadlvslsrd
      661 ifiylcnrdp gpwkillslp cispndlhaf eealtktasp keqkqlmksf lllatgnnlk
      721 alaaqkcvni itnvtdkhsi fhcstl
//
LOCUS       XP_040942118             737 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HASTY 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942118
VERSION     XP_040942118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086184.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..737
                     /product="protein HASTY 1 isoform X3"
                     /calculated_mol_wt=81768
     Region          41..717
                     /region_name="Exportin-5"
                     /note="Exportin-5 family; pfam19273"
                     /db_xref="CDD:437105"
     CDS             1..737
                     /gene="LOC107893603"
                     /coded_by="XM_041086184.1:684..2897"
                     /db_xref="GeneID:107893603"
ORIGIN      
        1 mkvttslwnm yvkvwclwvp qicnvlleia lhshsiysrc lgffqhfkla lhyqslqfwl
       61 vllrdamskp klsvhssgdg ltatnvdstl aqvdeekrki lsflnddics tildisfqrm
      121 lkkeklmtet alspgilelw sddfegkgdf gqyrsrlplv agakvserii miiksllnsp
      181 mpsqdlavme smqmalenvv isifdgsnef aggssevhla lcrifegllr ellslnrtep
      241 alvevlghyl eamgpflkyf adavasvink lfellnslpf ivkdpstrga rharlqicts
      301 firiakaadk silphmkllr gihslwspsv fqmlpgeika amsmsdveqs sllgggnpkl
      361 skgaltfvdg sqfdmnkegy ikpneadiqn wlkgirdsgy nvlglsttig dpffkcidid
      421 fvsltlieni qsmefrhtrl lvhsililli kscpldmwev wlerllhplf ihcqqalscs
      481 wssllhegra kvpdnhgilt gsdlkvevme etllrdltre icsllstias pglnaslpsl
      541 ehaghvgrvd tsslkdldaf asssmvnfll khkslaipvl qisleafswt dseavtkvca
      601 fsaavvllai ftnnvdlrey vsrdlfsavi qglalesnav isadlvslsr difiylcnrd
      661 pgpwkillsl pcispndlha feealtktas pkeqkqlmks flllatgnnl kalaaqkcvn
      721 iitnvtdkhs ifhcstl
//
LOCUS       XP_040942120             358 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942120
VERSION     XP_040942120.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086186.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..358
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40674
     Region          30..72
                     /region_name="Retrotran_gag_3"
                     /note="gag-polypeptide of LTR copia-type; pfam14244"
                     /db_xref="CDD:464114"
     CDS             1..358
                     /gene="LOC121212759"
                     /coded_by="XM_041086186.1:83..1159"
                     /db_xref="GeneID:121212759"
ORIGIN      
        1 mgdinenfse tetsqitqni nqgitqgein ssliitnhrl ngknflqwsq silmvirgrg
       61 klgyingeip rptmadptya twelnnsivm awlinsmegh isrtylffkt akdmwdavke
      121 iysdlgnasq vfeiklklkd irqgtlevth yynnlkilwq eldmyyeadw geglehnrfm
      181 vhlnnerlye flaglnreld evrgrilgrs plptigeafa evrreekrcl vmmgdskepk
      241 pmtpisnrpt etsaliskgp qpqkqragnd sgstrpwcsh cnrvghtkek cfklhgypek
      301 kqkdnktaml ssttaddvld vrltktqlet lhkilgtptt hgslatqgte igeddrhc
//
LOCUS       XP_016674129             374 aa            linear   PLN 06-AUG-2024
DEFINITION  myb-related protein 1 [Gossypium hirsutum].
ACCESSION   XP_016674129
VERSION     XP_016674129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818640.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..374
                     /product="myb-related protein 1"
                     /calculated_mol_wt=41158
     Region          44..100
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          85..>211
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          145..191
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..374
                     /gene="LOC107893604"
                     /coded_by="XM_016818640.2:288..1412"
                     /db_xref="GeneID:107893604"
ORIGIN      
        1 myhhhhqgkn iqaclrtaip drhlllqggn gtgdsglvls tdakprlkwt pdlherfiea
       61 vnqlggadka tpktvmkimg ipgltlyhlk shlqkyrlsk nphgqanngs nkigavampa
      121 dkiseangiq mnnstvgpqt nrglqiseal qmqievqrrl heqlevqrhl qlrieaqgky
      181 lqsvlekaqe slgrqnpgsm gleaaqlqls elvskvsnqc ldstlmdlke lqglchqktk
      241 tnsidsclts iegsqkdqei hnngiclrpy slvaedpwlp qtglrenkmv psstakiadr
      301 ssngsdlsit vglqgdkgkg fnsnssrfse rkfngrnedd glhyfatkld lnvdeendva
      361 srckqfdlng lswg
//
LOCUS       XP_016674191             886 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016674191
VERSION     XP_016674191.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818702.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..886
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X1"
                     /calculated_mol_wt=97099
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <254..491
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          738..878
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..886
                     /gene="LOC107893651"
                     /coded_by="XM_016818702.2:222..2882"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpq ggssqehved tasqdsnsdi aktpppksst
      301 inssaaatpa gshvtpapln lpphslsgas spsvlpdsns aqgllestgt tnpppvnlsn
      361 atkeeditnf pgrrsspsla dtevrgigrg lsgqpsstip lvsgsvasgn galgavppas
      421 dmakrnilgv derlgnssmg qsltspisnr milpqaaksn dgnapvdssn pnesaglpgr
      481 afspsmvsgm qwrpgssfqn qnelvqfrgr teiapdirek flqrfqqvqq qghsnllssm
      541 splaggnhnq fsaqqqsplm qqfnpqsscf sippglghgg qapglnsvts aslqqqpnsi
      601 hqqsgqqala tsvpkdadvg vakveeqqpq slpdgsssea iqtsglaknl mneddlkapy
      661 aidspaavsg slteparnir didlspgqpl qynqsssglg vigrrsvsdl gaigdslsgs
      721 tnsggmhdql ynmqmleaay ykipqpkdse rvrsytpkhp aatpasypqv qapivnnpaf
      781 werismdgyg tgtdtlfvaf yyqqntyqqy laakelkkqs wryhrkyntw fqrheepkia
      841 tdefeqgtyv yfdfhvandd hqhgwcqrik tefifeynyl edeliv
//
LOCUS       XP_016674192             885 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016674192
VERSION     XP_016674192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818703.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..885
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X2"
                     /calculated_mol_wt=96971
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <254..490
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          737..877
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..885
                     /gene="LOC107893651"
                     /coded_by="XM_016818703.2:218..2875"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpg gssqehvedt asqdsnsdia ktpppkssti
      301 nssaaatpag shvtpaplnl pphslsgass psvlpdsnsa qgllestgtt npppvnlsna
      361 tkeeditnfp grrsspslad tevrgigrgl sgqpsstipl vsgsvasgng algavppasd
      421 makrnilgvd erlgnssmgq sltspisnrm ilpqaaksnd gnapvdssnp nesaglpgra
      481 fspsmvsgmq wrpgssfqnq nelvqfrgrt eiapdirekf lqrfqqvqqq ghsnllssms
      541 plaggnhnqf saqqqsplmq qfnpqsscfs ippglghggq apglnsvtsa slqqqpnsih
      601 qqsgqqalat svpkdadvgv akveeqqpqs lpdgssseai qtsglaknlm neddlkapya
      661 idspaavsgs lteparnird idlspgqplq ynqsssglgv igrrsvsdlg aigdslsgst
      721 nsggmhdqly nmqmleaayy kipqpkdser vrsytpkhpa atpasypqvq apivnnpafw
      781 erismdgygt gtdtlfvafy yqqntyqqyl aakelkkqsw ryhrkyntwf qrheepkiat
      841 defeqgtyvy fdfhvanddh qhgwcqrikt efifeynyle deliv
//
LOCUS       XP_040942121             884 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942121
VERSION     XP_040942121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086187.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..884
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X3"
                     /calculated_mol_wt=96872
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <254..491
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          736..876
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..884
                     /gene="LOC107893651"
                     /coded_by="XM_041086187.1:194..2848"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpq ggssqehved tasqdsnsdi aktpppksst
      301 inssaaatpa gshvtpapln lpphslsgas spsvlpdsns aqgllestgt tnpppvnlsn
      361 atkeeditnf pgrrsspsla dtevrgigrg lsgqpsstip lvsgsvasgn galgavppas
      421 dmakrnilgv derlgnssmg qsltspisnr milpqaaksn dgnapvdssn pnesaglpgr
      481 afspsmvsgm qwrpgssfqn qnelfrgrte iapdirekfl qrfqqvqqqg hsnllssmsp
      541 laggnhnqfs aqqqsplmqq fnpqsscfsi ppglghggqa pglnsvtsas lqqqpnsihq
      601 qsgqqalats vpkdadvgva kveeqqpqsl pdgssseaiq tsglaknlmn eddlkapyai
      661 dspaavsgsl teparnirdi dlspgqplqy nqsssglgvi grrsvsdlga igdslsgstn
      721 sggmhdqlyn mqmleaayyk ipqpkdserv rsytpkhpaa tpasypqvqa pivnnpafwe
      781 rismdgygtg tdtlfvafyy qqntyqqyla akelkkqswr yhrkyntwfq rheepkiatd
      841 efeqgtyvyf dfhvanddhq hgwcqrikte fifeynyled eliv
//
LOCUS       XP_016674193             880 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016674193
VERSION     XP_016674193.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818704.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..880
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X4"
                     /calculated_mol_wt=96555
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          732..872
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..880
                     /gene="LOC107893651"
                     /coded_by="XM_016818704.2:194..2836"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpe hvedtasqds nsdiaktppp ksstinssaa
      301 atpagshvtp aplnlpphsl sgasspsvlp dsnsaqglle stgttnpppv nlsnatkeed
      361 itnfpgrrss psladtevrg igrglsgqps stiplvsgsv asgngalgav ppasdmakrn
      421 ilgvderlgn ssmgqsltsp isnrmilpqa aksndgnapv dssnpnesag lpgrafspsm
      481 vsgmqwrpgs sfqnqnelvq frgrteiapd irekflqrfq qvqqqghsnl lssmsplagg
      541 nhnqfsaqqq splmqqfnpq sscfsippgl ghggqapgln svtsaslqqq pnsihqqsgq
      601 qalatsvpkd advgvakvee qqpqslpdgs sseaiqtsgl aknlmneddl kapyaidspa
      661 avsgsltepa rnirdidlsp gqplqynqss sglgvigrrs vsdlgaigds lsgstnsggm
      721 hdqlynmqml eaayykipqp kdservrsyt pkhpaatpas ypqvqapivn npafwerism
      781 dgygtgtdtl fvafyyqqnt yqqylaakel kkqswryhrk yntwfqrhee pkiatdefeq
      841 gtyvyfdfhv anddhqhgwc qriktefife ynyledeliv
//
LOCUS       XP_016674194             880 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_016674194
VERSION     XP_016674194.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818705.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..880
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X5"
                     /calculated_mol_wt=96395
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <254..491
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          738..872
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..880
                     /gene="LOC107893651"
                     /coded_by="XM_016818705.2:222..2864"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpq ggssqehved tasqdsnsdi aktpppksst
      301 inssaaatpa gshvtpapln lpphslsgas spsvlpdsns aqgllestgt tnpppvnlsn
      361 atkeeditnf pgrrsspsla dtevrgigrg lsgqpsstip lvsgsvasgn galgavppas
      421 dmakrnilgv derlgnssmg qsltspisnr milpqaaksn dgnapvdssn pnesaglpgr
      481 afspsmvsgm qwrpgssfqn qnelvqfrgr teiapdirek flqrfqqvqq qghsnllssm
      541 splaggnhnq fsaqqqsplm qqfnpqsscf sippglghgg qapglnsvts aslqqqpnsi
      601 hqqsgqqala tsvpkdadvg vakveeqqpq slpdgsssea iqtsglaknl mneddlkapy
      661 aidspaavsg slteparnir didlspgqpl qynqsssglg vigrrsvsdl gaigdslsgs
      721 tnsggmhdql ynmqmleaay ykipqpkdse rkhpaatpas ypqvqapivn npafwerism
      781 dgygtgtdtl fvafyyqqnt yqqylaakel kkqswryhrk yntwfqrhee pkiatdefeq
      841 gtyvyfdfhv anddhqhgwc qriktefife ynyledeliv
//
LOCUS       XP_016674195             879 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_016674195
VERSION     XP_016674195.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818706.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..879
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X6"
                     /calculated_mol_wt=96320
     Region          3..210
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <247..484
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          731..871
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..879
                     /gene="LOC107893651"
                     /coded_by="XM_016818706.2:216..2855"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkalvda rkqieremer fkiceketkt kafskeglgq qpktdpkeka
      121 ksetrdwlnn vvgelesqid sfeaeiegls vkkgkmrppr lthletsitr hkahimklel
      181 ilrlldndel speqvndvkd flddyvernq edfdefddvd elysslpldk vesledlvai
      241 gplskggpil ktslaasmsq lpqggssqeh vedtasqdsn sdiaktpppk sstinssaaa
      301 tpagshvtpa plnlpphsls gasspsvlpd snsaqglles tgttnpppvn lsnatkeedi
      361 tnfpgrrssp sladtevrgi grglsgqpss tiplvsgsva sgngalgavp pasdmakrni
      421 lgvderlgns smgqsltspi snrmilpqaa ksndgnapvd ssnpnesagl pgrafspsmv
      481 sgmqwrpgss fqnqnelvqf rgrteiapdi rekflqrfqq vqqqghsnll ssmsplaggn
      541 hnqfsaqqqs plmqqfnpqs scfsippglg hggqapglns vtsaslqqqp nsihqqsgqq
      601 alatsvpkda dvgvakveeq qpqslpdgss seaiqtsgla knlmneddlk apyaidspaa
      661 vsgsltepar nirdidlspg qplqynqsss glgvigrrsv sdlgaigdsl sgstnsggmh
      721 dqlynmqmle aayykipqpk dservrsytp khpaatpasy pqvqapivnn pafwerismd
      781 gygtgtdtlf vafyyqqnty qqylaakelk kqswryhrky ntwfqrheep kiatdefeqg
      841 tyvyfdfhva nddhqhgwcq riktefifey nyledeliv
//
LOCUS       XP_040942123             879 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X7 [Gossypium
            hirsutum].
ACCESSION   XP_040942123
VERSION     XP_040942123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086189.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..879
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X7"
                     /calculated_mol_wt=96267
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <254..490
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          737..871
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..879
                     /gene="LOC107893651"
                     /coded_by="XM_041086189.1:218..2857"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpg gssqehvedt asqdsnsdia ktpppkssti
      301 nssaaatpag shvtpaplnl pphslsgass psvlpdsnsa qgllestgtt npppvnlsna
      361 tkeeditnfp grrsspslad tevrgigrgl sgqpsstipl vsgsvasgng algavppasd
      421 makrnilgvd erlgnssmgq sltspisnrm ilpqaaksnd gnapvdssnp nesaglpgra
      481 fspsmvsgmq wrpgssfqnq nelvqfrgrt eiapdirekf lqrfqqvqqq ghsnllssms
      541 plaggnhnqf saqqqsplmq qfnpqsscfs ippglghggq apglnsvtsa slqqqpnsih
      601 qqsgqqalat svpkdadvgv akveeqqpqs lpdgssseai qtsglaknlm neddlkapya
      661 idspaavsgs lteparnird idlspgqplq ynqsssglgv igrrsvsdlg aigdslsgst
      721 nsggmhdqly nmqmleaayy kipqpkdser khpaatpasy pqvqapivnn pafwerismd
      781 gygtgtdtlf vafyyqqnty qqylaakelk kqswryhrky ntwfqrheep kiatdefeqg
      841 tyvyfdfhva nddhqhgwcq riktefifey nyledeliv
//
LOCUS       XP_040942124             878 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X8 [Gossypium
            hirsutum].
ACCESSION   XP_040942124
VERSION     XP_040942124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086190.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..878
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X8"
                     /calculated_mol_wt=96192
     Region          3..210
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <247..483
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          730..870
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..878
                     /gene="LOC107893651"
                     /coded_by="XM_041086190.1:194..2830"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkalvda rkqieremer fkiceketkt kafskeglgq qpktdpkeka
      121 ksetrdwlnn vvgelesqid sfeaeiegls vkkgkmrppr lthletsitr hkahimklel
      181 ilrlldndel speqvndvkd flddyvernq edfdefddvd elysslpldk vesledlvai
      241 gplskggpil ktslaasmsq lpggssqehv edtasqdsns diaktpppks stinssaaat
      301 pagshvtpap lnlpphslsg asspsvlpds nsaqgllest gttnpppvnl snatkeedit
      361 nfpgrrssps ladtevrgig rglsgqpsst iplvsgsvas gngalgavpp asdmakrnil
      421 gvderlgnss mgqsltspis nrmilpqaak sndgnapvds snpnesaglp grafspsmvs
      481 gmqwrpgssf qnqnelvqfr grteiapdir ekflqrfqqv qqqghsnlls smsplaggnh
      541 nqfsaqqqsp lmqqfnpqss cfsippglgh ggqapglnsv tsaslqqqpn sihqqsgqqa
      601 latsvpkdad vgvakveeqq pqslpdgsss eaiqtsglak nlmneddlka pyaidspaav
      661 sgslteparn irdidlspgq plqynqsssg lgvigrrsvs dlgaigdsls gstnsggmhd
      721 qlynmqmlea ayykipqpkd servrsytpk hpaatpasyp qvqapivnnp afwerismdg
      781 ygtgtdtlfv afyyqqntyq qylaakelkk qswryhrkyn twfqrheepk iatdefeqgt
      841 yvyfdfhvan ddhqhgwcqr iktefifeyn yledeliv
//
LOCUS       XP_040942125             878 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X9 [Gossypium
            hirsutum].
ACCESSION   XP_040942125
VERSION     XP_040942125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086191.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..878
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X9"
                     /calculated_mol_wt=96327
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          730..870
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..878
                     /gene="LOC107893651"
                     /coded_by="XM_041086191.1:194..2830"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpe hvedtasqds nsdiaktppp ksstinssaa
      301 atpagshvtp aplnlpphsl sgasspsvlp dsnsaqglle stgttnpppv nlsnatkeed
      361 itnfpgrrss psladtevrg igrglsgqps stiplvsgsv asgngalgav ppasdmakrn
      421 ilgvderlgn ssmgqsltsp isnrmilpqa aksndgnapv dssnpnesag lpgrafspsm
      481 vsgmqwrpgs sfqnqnelfr grteiapdir ekflqrfqqv qqqghsnlls smsplaggnh
      541 nqfsaqqqsp lmqqfnpqss cfsippglgh ggqapglnsv tsaslqqqpn sihqqsgqqa
      601 latsvpkdad vgvakveeqq pqslpdgsss eaiqtsglak nlmneddlka pyaidspaav
      661 sgslteparn irdidlspgq plqynqsssg lgvigrrsvs dlgaigdsls gstnsggmhd
      721 qlynmqmlea ayykipqpkd servrsytpk hpaatpasyp qvqapivnnp afwerismdg
      781 ygtgtdtlfv afyyqqntyq qylaakelkk qswryhrkyn twfqrheepk iatdefeqgt
      841 yvyfdfhvan ddhqhgwcqr iktefifeyn yledeliv
//
LOCUS       XP_040942126             876 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X10 [Gossypium
            hirsutum].
ACCESSION   XP_040942126
VERSION     XP_040942126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086192.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..876
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X10"
                     /calculated_mol_wt=95965
     Region          3..210
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <247..483
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          728..868
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..876
                     /gene="LOC107893651"
                     /coded_by="XM_041086192.1:194..2824"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkalvda rkqieremer fkiceketkt kafskeglgq qpktdpkeka
      121 ksetrdwlnn vvgelesqid sfeaeiegls vkkgkmrppr lthletsitr hkahimklel
      181 ilrlldndel speqvndvkd flddyvernq edfdefddvd elysslpldk vesledlvai
      241 gplskggpil ktslaasmsq lpggssqehv edtasqdsns diaktpppks stinssaaat
      301 pagshvtpap lnlpphslsg asspsvlpds nsaqgllest gttnpppvnl snatkeedit
      361 nfpgrrssps ladtevrgig rglsgqpsst iplvsgsvas gngalgavpp asdmakrnil
      421 gvderlgnss mgqsltspis nrmilpqaak sndgnapvds snpnesaglp grafspsmvs
      481 gmqwrpgssf qnqnelfrgr teiapdirek flqrfqqvqq qghsnllssm splaggnhnq
      541 fsaqqqsplm qqfnpqsscf sippglghgg qapglnsvts aslqqqpnsi hqqsgqqala
      601 tsvpkdadvg vakveeqqpq slpdgsssea iqtsglaknl mneddlkapy aidspaavsg
      661 slteparnir didlspgqpl qynqsssglg vigrrsvsdl gaigdslsgs tnsggmhdql
      721 ynmqmleaay ykipqpkdse rvrsytpkhp aatpasypqv qapivnnpaf werismdgyg
      781 tgtdtlfvaf yyqqntyqqy laakelkkqs wryhrkyntw fqrheepkia tdefeqgtyv
      841 yfdfhvandd hqhgwcqrik tefifeynyl edeliv
//
LOCUS       XP_040942127             874 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X11 [Gossypium
            hirsutum].
ACCESSION   XP_040942127
VERSION     XP_040942127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086193.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..874
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X11"
                     /calculated_mol_wt=95851
     Region          3..217
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          732..866
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..874
                     /gene="LOC107893651"
                     /coded_by="XM_041086193.1:194..2818"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvvg elesqidsfe aeieglsvkk gkmrpprlth letsitrhka
      181 himklelilr lldndelspe qvndvkdfld dyvernqedf defddvdely sslpldkves
      241 ledlvaigpl skggpilkts laasmsqlpe hvedtasqds nsdiaktppp ksstinssaa
      301 atpagshvtp aplnlpphsl sgasspsvlp dsnsaqglle stgttnpppv nlsnatkeed
      361 itnfpgrrss psladtevrg igrglsgqps stiplvsgsv asgngalgav ppasdmakrn
      421 ilgvderlgn ssmgqsltsp isnrmilpqa aksndgnapv dssnpnesag lpgrafspsm
      481 vsgmqwrpgs sfqnqnelvq frgrteiapd irekflqrfq qvqqqghsnl lssmsplagg
      541 nhnqfsaqqq splmqqfnpq sscfsippgl ghggqapgln svtsaslqqq pnsihqqsgq
      601 qalatsvpkd advgvakvee qqpqslpdgs sseaiqtsgl aknlmneddl kapyaidspa
      661 avsgsltepa rnirdidlsp gqplqynqss sglgvigrrs vsdlgaigds lsgstnsggm
      721 hdqlynmqml eaayykipqp kdserkhpaa tpasypqvqa pivnnpafwe rismdgygtg
      781 tdtlfvafyy qqntyqqyla akelkkqswr yhrkyntwfq rheepkiatd efeqgtyvyf
      841 dfhvanddhq hgwcqrikte fifeynyled eliv
//
LOCUS       XP_040942128             856 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X12 [Gossypium
            hirsutum].
ACCESSION   XP_040942128
VERSION     XP_040942128.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086194.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..856
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X12"
                     /calculated_mol_wt=93773
     Region          3..187
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <224..461
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          708..848
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..856
                     /gene="LOC107893651"
                     /coded_by="XM_041086194.1:194..2764"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvth letsitrhka himklelilr lldndelspe qvndvkdfld
      181 dyvernqedf defddvdely sslpldkves ledlvaigpl skggpilkts laasmsqlpq
      241 ggssqehved tasqdsnsdi aktpppksst inssaaatpa gshvtpapln lpphslsgas
      301 spsvlpdsns aqgllestgt tnpppvnlsn atkeeditnf pgrrsspsla dtevrgigrg
      361 lsgqpsstip lvsgsvasgn galgavppas dmakrnilgv derlgnssmg qsltspisnr
      421 milpqaaksn dgnapvdssn pnesaglpgr afspsmvsgm qwrpgssfqn qnelvqfrgr
      481 teiapdirek flqrfqqvqq qghsnllssm splaggnhnq fsaqqqsplm qqfnpqsscf
      541 sippglghgg qapglnsvts aslqqqpnsi hqqsgqqala tsvpkdadvg vakveeqqpq
      601 slpdgsssea iqtsglaknl mneddlkapy aidspaavsg slteparnir didlspgqpl
      661 qynqsssglg vigrrsvsdl gaigdslsgs tnsggmhdql ynmqmleaay ykipqpkdse
      721 rvrsytpkhp aatpasypqv qapivnnpaf werismdgyg tgtdtlfvaf yyqqntyqqy
      781 laakelkkqs wryhrkyntw fqrheepkia tdefeqgtyv yfdfhvandd hqhgwcqrik
      841 tefifeynyl edeliv
//
LOCUS       XP_040942129             855 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X13 [Gossypium
            hirsutum].
ACCESSION   XP_040942129
VERSION     XP_040942129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086195.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..855
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X13"
                     /calculated_mol_wt=93645
     Region          3..187
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <224..460
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          707..847
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..855
                     /gene="LOC107893651"
                     /coded_by="XM_041086195.1:194..2761"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvth letsitrhka himklelilr lldndelspe qvndvkdfld
      181 dyvernqedf defddvdely sslpldkves ledlvaigpl skggpilkts laasmsqlpg
      241 gssqehvedt asqdsnsdia ktpppkssti nssaaatpag shvtpaplnl pphslsgass
      301 psvlpdsnsa qgllestgtt npppvnlsna tkeeditnfp grrsspslad tevrgigrgl
      361 sgqpsstipl vsgsvasgng algavppasd makrnilgvd erlgnssmgq sltspisnrm
      421 ilpqaaksnd gnapvdssnp nesaglpgra fspsmvsgmq wrpgssfqnq nelvqfrgrt
      481 eiapdirekf lqrfqqvqqq ghsnllssms plaggnhnqf saqqqsplmq qfnpqsscfs
      541 ippglghggq apglnsvtsa slqqqpnsih qqsgqqalat svpkdadvgv akveeqqpqs
      601 lpdgssseai qtsglaknlm neddlkapya idspaavsgs lteparnird idlspgqplq
      661 ynqsssglgv igrrsvsdlg aigdslsgst nsggmhdqly nmqmleaayy kipqpkdser
      721 vrsytpkhpa atpasypqvq apivnnpafw erismdgygt gtdtlfvafy yqqntyqqyl
      781 aakelkkqsw ryhrkyntwf qrheepkiat defeqgtyvy fdfhvanddh qhgwcqrikt
      841 efifeynyle deliv
//
LOCUS       XP_040942130             850 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X14 [Gossypium
            hirsutum].
ACCESSION   XP_040942130
VERSION     XP_040942130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086196.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..850
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X14"
                     /calculated_mol_wt=93229
     Region          3..187
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          702..842
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..850
                     /gene="LOC107893651"
                     /coded_by="XM_041086196.1:194..2746"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkisasy eqalvdarkq ieremerfki ceketktkaf skeglgqqpk
      121 tdpkekakse trdwlnnvth letsitrhka himklelilr lldndelspe qvndvkdfld
      181 dyvernqedf defddvdely sslpldkves ledlvaigpl skggpilkts laasmsqlpe
      241 hvedtasqds nsdiaktppp ksstinssaa atpagshvtp aplnlpphsl sgasspsvlp
      301 dsnsaqglle stgttnpppv nlsnatkeed itnfpgrrss psladtevrg igrglsgqps
      361 stiplvsgsv asgngalgav ppasdmakrn ilgvderlgn ssmgqsltsp isnrmilpqa
      421 aksndgnapv dssnpnesag lpgrafspsm vsgmqwrpgs sfqnqnelvq frgrteiapd
      481 irekflqrfq qvqqqghsnl lssmsplagg nhnqfsaqqq splmqqfnpq sscfsippgl
      541 ghggqapgln svtsaslqqq pnsihqqsgq qalatsvpkd advgvakvee qqpqslpdgs
      601 sseaiqtsgl aknlmneddl kapyaidspa avsgsltepa rnirdidlsp gqplqynqss
      661 sglgvigrrs vsdlgaigds lsgstnsggm hdqlynmqml eaayykipqp kdservrsyt
      721 pkhpaatpas ypqvqapivn npafwerism dgygtgtdtl fvafyyqqnt yqqylaakel
      781 kkqswryhrk yntwfqrhee pkiatdefeq gtyvyfdfhv anddhqhgwc qriktefife
      841 ynyledeliv
//
LOCUS       XP_040942131             848 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X15 [Gossypium
            hirsutum].
ACCESSION   XP_040942131
VERSION     XP_040942131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086197.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..848
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X15"
                     /calculated_mol_wt=92866
     Region          3..180
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <217..453
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          700..840
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..848
                     /gene="LOC107893651"
                     /coded_by="XM_041086197.1:194..2740"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 mgasrklqge idrvlkkvqe gvdvfdsiwn kvydtdnanq kekfeadlkk eikklqryrd
       61 qiktwiqsse ikdkkalvda rkqieremer fkiceketkt kafskeglgq qpktdpkeka
      121 ksetrdwlnn vthletsitr hkahimklel ilrlldndel speqvndvkd flddyvernq
      181 edfdefddvd elysslpldk vesledlvai gplskggpil ktslaasmsq lpggssqehv
      241 edtasqdsns diaktpppks stinssaaat pagshvtpap lnlpphslsg asspsvlpds
      301 nsaqgllest gttnpppvnl snatkeedit nfpgrrssps ladtevrgig rglsgqpsst
      361 iplvsgsvas gngalgavpp asdmakrnil gvderlgnss mgqsltspis nrmilpqaak
      421 sndgnapvds snpnesaglp grafspsmvs gmqwrpgssf qnqnelvqfr grteiapdir
      481 ekflqrfqqv qqqghsnlls smsplaggnh nqfsaqqqsp lmqqfnpqss cfsippglgh
      541 ggqapglnsv tsaslqqqpn sihqqsgqqa latsvpkdad vgvakveeqq pqslpdgsss
      601 eaiqtsglak nlmneddlka pyaidspaav sgslteparn irdidlspgq plqynqsssg
      661 lgvigrrsvs dlgaigdsls gstnsggmhd qlynmqmlea ayykipqpkd servrsytpk
      721 hpaatpasyp qvqapivnnp afwerismdg ygtgtdtlfv afyyqqntyq qylaakelkk
      781 qswryhrkyn twfqrheepk iatdefeqgt yvyfdfhvan ddhqhgwcqr iktefifeyn
      841 yledeliv
//
LOCUS       XP_016674196             792 aa            linear   PLN 06-AUG-2024
DEFINITION  CCR4-NOT transcription complex subunit 3 isoform X16 [Gossypium
            hirsutum].
ACCESSION   XP_016674196
VERSION     XP_016674196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818707.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..792
                     /product="CCR4-NOT transcription complex subunit 3 isoform
                     X16"
                     /calculated_mol_wt=85999
     Region          <1..123
                     /region_name="Not3"
                     /note="Not1 N-terminal domain, CCR4-Not complex component;
                     pfam04065"
                     /db_xref="CDD:461155"
     Region          <160..397
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          644..784
                     /region_name="NOT2_3_5"
                     /note="NOT2 / NOT3 / NOT5 family; pfam04153"
                     /db_xref="CDD:461199"
     CDS             1..792
                     /gene="LOC107893651"
                     /coded_by="XM_016818707.2:503..2881"
                     /db_xref="GeneID:107893651"
ORIGIN      
        1 merfkiceke tktkafskeg lgqqpktdpk ekaksetrdw lnnvvgeles qidsfeaeie
       61 glsvkkgkmr pprlthlets itrhkahimk lelilrlldn delspeqvnd vkdflddyve
      121 rnqedfdefd dvdelysslp ldkvesledl vaigplskgg pilktslaas msqlpqggss
      181 qehvedtasq dsnsdiaktp ppksstinss aaatpagshv tpaplnlpph slsgasspsv
      241 lpdsnsaqgl lestgttnpp pvnlsnatke editnfpgrr sspsladtev rgigrglsgq
      301 psstiplvsg svasgngalg avppasdmak rnilgvderl gnssmgqslt spisnrmilp
      361 qaaksndgna pvdssnpnes aglpgrafsp smvsgmqwrp gssfqnqnel vqfrgrteia
      421 pdirekflqr fqqvqqqghs nllssmspla ggnhnqfsaq qqsplmqqfn pqsscfsipp
      481 glghggqapg lnsvtsaslq qqpnsihqqs gqqalatsvp kdadvgvakv eeqqpqslpd
      541 gssseaiqts glaknlmned dlkapyaids paavsgslte parnirdidl spgqplqynq
      601 sssglgvigr rsvsdlgaig dslsgstnsg gmhdqlynmq mleaayykip qpkdservrs
      661 ytpkhpaatp asypqvqapi vnnpafweri smdgygtgtd tlfvafyyqq ntyqqylaak
      721 elkkqswryh rkyntwfqrh eepkiatdef eqgtyvyfdf hvanddhqhg wcqriktefi
      781 feynyledel iv
//
LOCUS       XP_016675722             658 aa            linear   PLN 06-AUG-2024
DEFINITION  inorganic pyrophosphatase TTM2 [Gossypium hirsutum].
ACCESSION   XP_016675722
VERSION     XP_016675722.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675722.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..658
                     /product="inorganic pyrophosphatase TTM2"
                     /calculated_mol_wt=73752
     Region          1..657
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..658
                     /gene="LOC107895040"
                     /coded_by="XM_016820233.2:551..2527"
                     /db_xref="GeneID:107895040"
ORIGIN      
        1 mpqdasglea qqkragllkd qvrlvkrkdc drheivpiqg plsfekgffi viracqllaq
       61 kndgiilvgl agpsgagktv ftekilnfmp siatismdny ndssrivdgn fddprltdyd
      121 tllqnlhdlk egkevqvpiy dfkassrigy rtlevpssri viiegiyals eklrpmldlr
      181 vsvtggvhfd lvkrvlrdiq ragqepeeii hqisetvypm ykafiepdlq taqikiinkf
      241 npftgfqspt yilksarelt veqiksaisd ehtetqeqty diyllppged pescqsylrm
      301 rnkdgkyslm feewvtdipf vispritfev svrllgglma lgytiatilk rnshvfsddk
      361 vcvkidwleq lnrqyfqvqg rdrsvvkcva eklglegsyi srtyieqiql eklvnevmal
      421 pedlktklsl dedlvsspkd allrasadrv alrnrhlksg ishsystqte knmsnfagyn
      481 vsnrrfgern sesalanegv itqlseqiss lndrmdefti rieelnsklt ikrytssqqn
      541 lafqaescng saptshfing lgngsimpns ssssqlakds pimeeissva rgqrqimhql
      601 dnlsnllreg igersqaact rkknmmaggg dfikvpvilt laigglgifl yrgiltrh
//
LOCUS       XP_016675723             658 aa            linear   PLN 06-AUG-2024
DEFINITION  inorganic pyrophosphatase TTM2 [Gossypium hirsutum].
ACCESSION   XP_016675723
VERSION     XP_016675723.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820234.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675723.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..658
                     /product="inorganic pyrophosphatase TTM2"
                     /calculated_mol_wt=73752
     Region          1..657
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..658
                     /gene="LOC107895040"
                     /coded_by="XM_016820234.2:184..2160"
                     /db_xref="GeneID:107895040"
ORIGIN      
        1 mpqdasglea qqkragllkd qvrlvkrkdc drheivpiqg plsfekgffi viracqllaq
       61 kndgiilvgl agpsgagktv ftekilnfmp siatismdny ndssrivdgn fddprltdyd
      121 tllqnlhdlk egkevqvpiy dfkassrigy rtlevpssri viiegiyals eklrpmldlr
      181 vsvtggvhfd lvkrvlrdiq ragqepeeii hqisetvypm ykafiepdlq taqikiinkf
      241 npftgfqspt yilksarelt veqiksaisd ehtetqeqty diyllppged pescqsylrm
      301 rnkdgkyslm feewvtdipf vispritfev svrllgglma lgytiatilk rnshvfsddk
      361 vcvkidwleq lnrqyfqvqg rdrsvvkcva eklglegsyi srtyieqiql eklvnevmal
      421 pedlktklsl dedlvsspkd allrasadrv alrnrhlksg ishsystqte knmsnfagyn
      481 vsnrrfgern sesalanegv itqlseqiss lndrmdefti rieelnsklt ikrytssqqn
      541 lafqaescng saptshfing lgngsimpns ssssqlakds pimeeissva rgqrqimhql
      601 dnlsnllreg igersqaact rkknmmaggg dfikvpvilt laigglgifl yrgiltrh
//
LOCUS       XP_016675724             658 aa            linear   PLN 06-AUG-2024
DEFINITION  inorganic pyrophosphatase TTM2 [Gossypium hirsutum].
ACCESSION   XP_016675724
VERSION     XP_016675724.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820235.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016675724.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..658
                     /product="inorganic pyrophosphatase TTM2"
                     /calculated_mol_wt=73752
     Region          1..657
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..658
                     /gene="LOC107895040"
                     /coded_by="XM_016820235.2:117..2093"
                     /db_xref="GeneID:107895040"
ORIGIN      
        1 mpqdasglea qqkragllkd qvrlvkrkdc drheivpiqg plsfekgffi viracqllaq
       61 kndgiilvgl agpsgagktv ftekilnfmp siatismdny ndssrivdgn fddprltdyd
      121 tllqnlhdlk egkevqvpiy dfkassrigy rtlevpssri viiegiyals eklrpmldlr
      181 vsvtggvhfd lvkrvlrdiq ragqepeeii hqisetvypm ykafiepdlq taqikiinkf
      241 npftgfqspt yilksarelt veqiksaisd ehtetqeqty diyllppged pescqsylrm
      301 rnkdgkyslm feewvtdipf vispritfev svrllgglma lgytiatilk rnshvfsddk
      361 vcvkidwleq lnrqyfqvqg rdrsvvkcva eklglegsyi srtyieqiql eklvnevmal
      421 pedlktklsl dedlvsspkd allrasadrv alrnrhlksg ishsystqte knmsnfagyn
      481 vsnrrfgern sesalanegv itqlseqiss lndrmdefti rieelnsklt ikrytssqqn
      541 lafqaescng saptshfing lgngsimpns ssssqlakds pimeeissva rgqrqimhql
      601 dnlsnllreg igersqaact rkknmmaggg dfikvpvilt laigglgifl yrgiltrh
//
LOCUS       XP_016674358             306 aa            linear   PLN 06-AUG-2024
DEFINITION  LAG1 longevity assurance homolog 3 [Gossypium hirsutum].
ACCESSION   XP_016674358
VERSION     XP_016674358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..306
                     /product="LAG1 longevity assurance homolog 3"
                     /calculated_mol_wt=35974
     Region          73..287
                     /region_name="TLC"
                     /note="TRAM, LAG1 and CLN8 homology domains; smart00724"
                     /db_xref="CDD:214789"
     CDS             1..306
                     /gene="LOC107893781"
                     /coded_by="XM_016818869.2:114..1034"
                     /db_xref="GeneID:107893781"
ORIGIN      
        1 mgliqfiksi dweqeaypay edfvvlpifa lffpsvrffl drfvfekvgg rlifgkghqi
       61 mesdtderrk kirkfkesaw kcvyylsaei lalsvtydep wfrntrnfwv gpgdqvwpdq
      121 kiklklrgly myvagfyays ifalvfwetr rsdfgvsmgh hvatvilivl syifrfarvg
      181 svvlaihdas dvfleigkms kysgaetlas fafvifvlsw illrliyypf wvlwstsyev
      241 lltldkekhp vdgpicyylf ntllfcllvl hiywwvlmyr mlvkqiqarg klsedvrsds
      301 edehed
//
LOCUS       XP_016755033             339 aa            linear   PLN 06-AUG-2024
DEFINITION  immune-associated nucleotide-binding protein 9 [Gossypium
            hirsutum].
ACCESSION   XP_016755033
VERSION     XP_016755033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016899544.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..339
                     /product="immune-associated nucleotide-binding protein 9"
                     /calculated_mol_wt=37756
     Region          21..227
                     /region_name="AIG1"
                     /note="AvrRpt2-Induced Gene 1 (AIG1); cd01852"
                     /db_xref="CDD:206651"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206651"
     Site            order(30..35,48,147,149,186..187)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206651"
     Site            55..62
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206651"
     Site            56
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206651"
     Site            76..79
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206651"
     Site            order(78..80,90..107)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206651"
     Site            146..149
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206651"
     Site            178..180
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206651"
     Region          <248..334
                     /region_name="DivIVA"
                     /note="DivIVA protein; pfam05103"
                     /db_xref="CDD:428304"
     CDS             1..339
                     /gene="LOC107962959"
                     /coded_by="XM_016899544.2:160..1179"
                     /db_xref="GeneID:107962959"
ORIGIN      
        1 mmggsaiddd weftspsngi ktvvlvgrtg ngksatgnsi lgkksfksra sssgvtssce
       61 lqktvlkdgq ilnvidtpgl fdfsagsefi gkeivkcidl akdgihavlv vfsvrtrfsq
      121 eeeaalrslq tlfgskivny mivvftggde leeneetled ylgrecpqpl kdilglcgnr
      181 lvlfdnktkd etkrvtqvqd lltlvnmvie qnggqpytde lfaelkkgat klrdqqevva
      241 alkgyskrei sefkeqiers yeeqlmrite mvesklkett vrleqqlaee qaarlkaeel
      301 aqlaqmksnd eirklrenle raeketeelr kqaarcail
//
LOCUS       XP_016755034             339 aa            linear   PLN 06-AUG-2024
DEFINITION  immune-associated nucleotide-binding protein 9 [Gossypium
            hirsutum].
ACCESSION   XP_016755034
VERSION     XP_016755034.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016899545.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..339
                     /product="immune-associated nucleotide-binding protein 9"
                     /calculated_mol_wt=37756
     Region          21..227
                     /region_name="AIG1"
                     /note="AvrRpt2-Induced Gene 1 (AIG1); cd01852"
                     /db_xref="CDD:206651"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206651"
     Site            order(30..35,48,147,149,186..187)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206651"
     Site            55..62
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206651"
     Site            56
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206651"
     Site            76..79
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206651"
     Site            order(78..80,90..107)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206651"
     Site            146..149
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206651"
     Site            178..180
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206651"
     Region          <248..334
                     /region_name="DivIVA"
                     /note="DivIVA protein; pfam05103"
                     /db_xref="CDD:428304"
     CDS             1..339
                     /gene="LOC107962959"
                     /coded_by="XM_016899545.2:128..1147"
                     /db_xref="GeneID:107962959"
ORIGIN      
        1 mmggsaiddd weftspsngi ktvvlvgrtg ngksatgnsi lgkksfksra sssgvtssce
       61 lqktvlkdgq ilnvidtpgl fdfsagsefi gkeivkcidl akdgihavlv vfsvrtrfsq
      121 eeeaalrslq tlfgskivny mivvftggde leeneetled ylgrecpqpl kdilglcgnr
      181 lvlfdnktkd etkrvtqvqd lltlvnmvie qnggqpytde lfaelkkgat klrdqqevva
      241 alkgyskrei sefkeqiers yeeqlmrite mvesklkett vrleqqlaee qaarlkaeel
      301 aqlaqmksnd eirklrenle raeketeelr kqaarcail
//
LOCUS       XP_040942132             515 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942132
VERSION     XP_040942132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086198.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..515
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=56725
     Region          408..463
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     CDS             1..515
                     /gene="LOC121212761"
                     /coded_by="XM_041086198.1:150..1697"
                     /db_xref="GeneID:121212761"
ORIGIN      
        1 msfqnqgiwm tkgagclndg emvydtssri epkrshqwfm dgsetdifpn kkqavgvstt
       61 nlfsgilnsn lspwgnasgf hsisgqfaer lfdtesarav nfddrsmpsv ssekvvmgrk
      121 lnediftnds sfclsmshtl edlrsglnlg girkvkvsev kdsenimsas mgyvfngvdn
      181 tsvsndhayn kvedgimpmg ssynkgdpig dtyerennvf msmgqsynks ednnalamsn
      241 afdkgentfi smgqtymtdd ssvtvcqtyg kgddsaisig qsykkgdnyn lsigqsysrg
      301 estiilfggs nddddtnppg rivsgynllm gqssvqrsna ssekvsvisn niiasgaevp
      361 rkkdeqktsk kltsnnfpsn vrsllstgml dgvpvkyiaw sqekelhgvi kssgyqcgcq
      421 tcnfskvina yeferhagck tkhpnnhiyf engktiygiv qelrstpqnm lfdviqtitg
      481 spinqkcfri wkesflaatl elqriygkde mkqls
//
LOCUS       XP_040942133             506 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942133
VERSION     XP_040942133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086199.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..506
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=55633
     Region          399..454
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     CDS             1..506
                     /gene="LOC121212761"
                     /coded_by="XM_041086199.1:433..1953"
                     /db_xref="GeneID:121212761"
ORIGIN      
        1 mtkgagclnd gemvydtssr iepkrshqwf mdgsetdifp nkkqavgvst tnlfsgilns
       61 nlspwgnasg fhsisgqfae rlfdtesara vnfddrsmps vssekvvmgr klnediftnd
      121 ssfclsmsht ledlrsglnl ggirkvkvse vkdsenimsa smgyvfngvd ntsvsndhay
      181 nkvedgimpm gssynkgdpi gdtyerennv fmsmgqsynk sednnalams nafdkgentf
      241 ismgqtymtd dssvtvcqty gkgddsaisi gqsykkgdny nlsigqsysr gestiilfgg
      301 snddddtnpp grivsgynll mgqssvqrsn assekvsvis nniiasgaev prkkdeqkts
      361 kkltsnnfps nvrsllstgm ldgvpvkyia wsqekelhgv ikssgyqcgc qtcnfskvin
      421 ayeferhagc ktkhpnnhiy fengktiygi vqelrstpqn mlfdviqtit gspinqkcfr
      481 iwkesflaat lelqriygkd emkqls
//
LOCUS       XP_040942134             497 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942134
VERSION     XP_040942134.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086200.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..497
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=54635
     Region          408..463
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     CDS             1..497
                     /gene="LOC121212761"
                     /coded_by="XM_041086200.1:150..1643"
                     /db_xref="GeneID:121212761"
ORIGIN      
        1 msfqnqgiwm tkgagclndg emvydtssri epkrshqwfm dgsetdifpn kkqavgvstt
       61 nlfsgilnsn lspwgnasgf hsisgqfaer lfdtesarav nfddrsmpsv ssekvvmgrk
      121 lnediftnds sfclsmshtl edlrsglnlg girkvkvsev kdsenimsas mgyvfngvdn
      181 tsvsndhayn kvedgimpmg ssynkgdpig dtyerennvf msmgqsynks ednnalamsn
      241 afdkgentfi smgqtymtdd ssvtvcqtyg kgddsaisig qsykkgdnyn lsigqsysrg
      301 estiilfggs nddddtnppg rivsgynllm gqssvqrsna ssekvsvisn niiasgaevp
      361 rkkdeqktsk kltsnnfpsn vrsllstgml dgvpvkyiaw sqekelhgvi kssgyqcgcq
      421 tcnfskvina yeferhagck tkhpnnhiyf engktiygiv qelrstpqnm lfdviqtitg
      481 spinqkcfri wkgdsrf
//
LOCUS       XP_040942135             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABE1c [Gossypium hirsutum].
ACCESSION   XP_040942135
VERSION     XP_040942135.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086201.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ras-related protein RABE1c"
                     /calculated_mol_wt=23624
     Region          13..180
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            13..17
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            22..29
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(24..30,40..43,46..47,73,128..129,131..132,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(30..42,44..46)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(40,45..53)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(43,45,49..56,63,65)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(48,50..52,67,69,76..77,80,84,86..89,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(48..49,51,69..70,77,79,81..83)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            48..52
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(73,75..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            76..81
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            84..88
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            116..125
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            175..180
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..215
                     /gene="LOC121203016"
                     /coded_by="XM_041086201.1:159..806"
                     /db_xref="GeneID:121203016"
ORIGIN      
        1 maapparara dydyliklll igdsgvgksc lllrfsdgsf ttsfittigi dfkirtield
       61 akriklqiwd tagqerfrti ttayyhgamg illvydvtde ssfnnirnwi rnieqhasdn
      121 vnkvlvanka dmdeskrava tskgqalade ygikffetsa ktnlnveevf fsiardikqr
      181 ladsdskaep ntikinqqdq aagaaenapk sgccg
//
LOCUS       XP_040942136             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABE1c [Gossypium hirsutum].
ACCESSION   XP_040942136
VERSION     XP_040942136.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086202.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ras-related protein RABE1c"
                     /calculated_mol_wt=23624
     Region          13..180
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            13..17
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            22..29
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(24..30,40..43,46..47,73,128..129,131..132,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(30..42,44..46)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(40,45..53)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(43,45,49..56,63,65)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(48,50..52,67,69,76..77,80,84,86..89,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(48..49,51,69..70,77,79,81..83)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            48..52
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(73,75..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            76..81
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            84..88
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            116..125
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            175..180
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..215
                     /gene="LOC121203016"
                     /coded_by="XM_041086202.1:160..807"
                     /db_xref="GeneID:121203016"
ORIGIN      
        1 maapparara dydyliklll igdsgvgksc lllrfsdgsf ttsfittigi dfkirtield
       61 akriklqiwd tagqerfrti ttayyhgamg illvydvtde ssfnnirnwi rnieqhasdn
      121 vnkvlvanka dmdeskrava tskgqalade ygikffetsa ktnlnveevf fsiardikqr
      181 ladsdskaep ntikinqqdq aagaaenapk sgccg
//
LOCUS       XP_040942137             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABE1c [Gossypium hirsutum].
ACCESSION   XP_040942137
VERSION     XP_040942137.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086203.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ras-related protein RABE1c"
                     /calculated_mol_wt=23624
     Region          13..180
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            13..17
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            22..29
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(24..30,40..43,46..47,73,128..129,131..132,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(30..42,44..46)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(40,45..53)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(43,45,49..56,63,65)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(48,50..52,67,69,76..77,80,84,86..89,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(48..49,51,69..70,77,79,81..83)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            48..52
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(73,75..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            76..81
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            84..88
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            116..125
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            175..180
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..215
                     /gene="LOC121203016"
                     /coded_by="XM_041086203.1:406..1053"
                     /db_xref="GeneID:121203016"
ORIGIN      
        1 maapparara dydyliklll igdsgvgksc lllrfsdgsf ttsfittigi dfkirtield
       61 akriklqiwd tagqerfrti ttayyhgamg illvydvtde ssfnnirnwi rnieqhasdn
      121 vnkvlvanka dmdeskrava tskgqalade ygikffetsa ktnlnveevf fsiardikqr
      181 ladsdskaep ntikinqqdq aagaaenapk sgccg
//
LOCUS       XP_040942138             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABE1c [Gossypium hirsutum].
ACCESSION   XP_040942138
VERSION     XP_040942138.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086204.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..215
                     /product="ras-related protein RABE1c"
                     /calculated_mol_wt=23624
     Region          13..180
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            13..17
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            22..29
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(24..30,40..43,46..47,73,128..129,131..132,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(30..42,44..46)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(40,45..53)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(43,45,49..56,63,65)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(48,50..52,67,69,76..77,80,84,86..89,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(48..49,51,69..70,77,79,81..83)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            48..52
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(73,75..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            76..81
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            84..88
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            116..125
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            175..180
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..215
                     /gene="LOC121203016"
                     /coded_by="XM_041086204.1:406..1053"
                     /db_xref="GeneID:121203016"
ORIGIN      
        1 maapparara dydyliklll igdsgvgksc lllrfsdgsf ttsfittigi dfkirtield
       61 akriklqiwd tagqerfrti ttayyhgamg illvydvtde ssfnnirnwi rnieqhasdn
      121 vnkvlvanka dmdeskrava tskgqalade ygikffetsa ktnlnveevf fsiardikqr
      181 ladsdskaep ntikinqqdq aagaaenapk sgccg
//
LOCUS       XP_016674247             618 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein S-acyltransferase 22 [Gossypium hirsutum].
ACCESSION   XP_016674247
VERSION     XP_016674247.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016818758.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674247.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..618
                     /product="probable protein S-acyltransferase 22"
                     /calculated_mol_wt=67921
     Region          179..311
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..618
                     /gene="LOC107893702"
                     /coded_by="XM_016818758.2:514..2370"
                     /db_xref="GeneID:107893702"
ORIGIN      
        1 mrkhgwqlpy hplqvvavav flalgfafyv ffapfvgkkm fqyivigiyt plitccfgly
       61 vwcaaadpad pgvfkskkhl kisenklsgp kdsklggdst tslhdgnatl vggktlekda
      121 aathetlknt slgtdrnhas skqsscfvwi ffpyafickc cssneesseq qmsedgmfyc
      181 slcevevfky skhcrvcdkc vdrfdhhcrw lnncigqrny rqffalmvsa llllilqwst
      241 gilvliccfi drkqfsidia tklgssfslv pfvivvalct ilamvatlpi aqllffhvll
      301 mkkgistydy iialreqeqe qqgigghqsp qmspassltg lssassfstf hrgawctppr
      361 lfledqfdvv ppdtgsvssy gkkmigeepi kkknpgavki spwtlarlna edvskaaaea
      421 rkkskilqpv vrretssrle aessfgssgr qvfsradsrr raskrvrlpa dlpmdplmti
      481 sakdtsssla plqlearsaf qtrramssya givasspess ldspdihpfq vsssgaeesr
      541 rltglssvnm avpngfplsr stsdgyeasg gedsdrvpsr iietstnwsn vlfdseqdds
      601 iiklkapsss sqvnirml
//
LOCUS       XP_040942139             324 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine synthase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942139
VERSION     XP_040942139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086205.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="cysteine synthase isoform X1"
                     /calculated_mol_wt=34106
     Region          3..324
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..324
                     /gene="LOC107893759"
                     /coded_by="XM_041086205.1:201..1175"
                     /db_xref="GeneID:107893759"
ORIGIN      
        1 medkdliakd vtqligktpl vylnkvvegc vapiaaklea mepcssvkdr igysmiadae
       61 ekgiikpges vlieptsgnt giglafmaaa kgyklvitmp ssmslerrmv lrafgaelvl
      121 tdpargmkga vqkaeeihak tpnsfilqqf enpanpkihy kttgpeiwkg tggrvdilvs
      181 gigtggtvtg agkylkeqnp nikligvepv esavlsggkp gphkiqglga gfipgvldvn
      241 lldeviqiss eeavetakql alkegllvgi ssgaaaaaav kiakrpentg klivvvfpsf
      301 gerylssvlf esvkreaenm vfep
//
LOCUS       XP_040942140             324 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine synthase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942140
VERSION     XP_040942140.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086206.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="cysteine synthase isoform X1"
                     /calculated_mol_wt=34106
     Region          3..324
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..324
                     /gene="LOC107893759"
                     /coded_by="XM_041086206.1:111..1085"
                     /db_xref="GeneID:107893759"
ORIGIN      
        1 medkdliakd vtqligktpl vylnkvvegc vapiaaklea mepcssvkdr igysmiadae
       61 ekgiikpges vlieptsgnt giglafmaaa kgyklvitmp ssmslerrmv lrafgaelvl
      121 tdpargmkga vqkaeeihak tpnsfilqqf enpanpkihy kttgpeiwkg tggrvdilvs
      181 gigtggtvtg agkylkeqnp nikligvepv esavlsggkp gphkiqglga gfipgvldvn
      241 lldeviqiss eeavetakql alkegllvgi ssgaaaaaav kiakrpentg klivvvfpsf
      301 gerylssvlf esvkreaenm vfep
//
LOCUS       XP_040942141             324 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine synthase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942141
VERSION     XP_040942141.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086207.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..324
                     /product="cysteine synthase isoform X1"
                     /calculated_mol_wt=34106
     Region          3..324
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..324
                     /gene="LOC107893759"
                     /coded_by="XM_041086207.1:160..1134"
                     /db_xref="GeneID:107893759"
ORIGIN      
        1 medkdliakd vtqligktpl vylnkvvegc vapiaaklea mepcssvkdr igysmiadae
       61 ekgiikpges vlieptsgnt giglafmaaa kgyklvitmp ssmslerrmv lrafgaelvl
      121 tdpargmkga vqkaeeihak tpnsfilqqf enpanpkihy kttgpeiwkg tggrvdilvs
      181 gigtggtvtg agkylkeqnp nikligvepv esavlsggkp gphkiqglga gfipgvldvn
      241 lldeviqiss eeavetakql alkegllvgi ssgaaaaaav kiakrpentg klivvvfpsf
      301 gerylssvlf esvkreaenm vfep
//
LOCUS       XP_040942142             223 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine synthase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942142
VERSION     XP_040942142.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086208.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..223
                     /product="cysteine synthase isoform X2"
                     /calculated_mol_wt=23517
     Region          3..>220
                     /region_name="PLN02565"
                     /note="cysteine synthase"
                     /db_xref="CDD:166206"
     CDS             1..223
                     /gene="LOC107893759"
                     /coded_by="XM_041086208.1:159..830"
                     /db_xref="GeneID:107893759"
ORIGIN      
        1 medkdliakd vtqligktpl vylnkvvegc vapiaaklea mepcssvkdr igysmiadae
       61 ekgiikpges vlieptsgnt giglafmaaa kgyklvitmp ssmslerrmv lrafgaelvl
      121 tdpargmkga vqkaeeihak tpnsfilqqf enpanpkihy kttgpeiwkg tggrvdilvs
      181 gigtggtvtg agkylkeqnp nikligvepv esavlsggkp dik
//
LOCUS       XP_016680614             261 aa            linear   PLN 06-AUG-2024
DEFINITION  late embryogenesis abundant protein D-34-like [Gossypium hirsutum].
ACCESSION   XP_016680614
VERSION     XP_016680614.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016825125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016680614.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..261
                     /product="late embryogenesis abundant protein D-34-like"
                     /calculated_mol_wt=26810
     Region          15..>50
                     /region_name="SMP"
                     /note="Seed maturation protein; pfam04927"
                     /db_xref="CDD:461485"
     Region          135..193
                     /region_name="SMP"
                     /note="Seed maturation protein; pfam04927"
                     /db_xref="CDD:461485"
     Region          200..>242
                     /region_name="SMP"
                     /note="Seed maturation protein; pfam04927"
                     /db_xref="CDD:461485"
     CDS             1..261
                     /gene="LOC107899418"
                     /coded_by="XM_016825125.2:85..870"
                     /db_xref="GeneID:107899418"
ORIGIN      
        1 msqqqprkpe eeeaikygdv fdvqgklaek pvapkdaamm qmagnallge tkkgcaaaam
       61 vsaamkneka gfvghedvnv dsgvtveetq lagkriites ienevigqys qaapltsgpy
      121 ssceqseedg gggpitigea leataltagn kpvewsdaaa iqaaevratg rtsimpggva
      181 aaaqsaatln arasreeekt klcdvlsnat erlgsdkaat rrdaegvava elrndptltt
      241 hpagvsasva aaarlndqis k
//
LOCUS       XP_040942144             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized N-acetyltransferase p20 [Gossypium hirsutum].
ACCESSION   XP_040942144
VERSION     XP_040942144.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086210.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..176
                     /product="uncharacterized N-acetyltransferase p20"
                     /calculated_mol_wt=20012
     Region          8..171
                     /region_name="RimL"
                     /note="Protein N-acetyltransferase, RimJ/RimL family
                     [Translation, ribosomal structure and biogenesis,
                     Posttranslational modification, protein turnover,
                     chaperones]; COG1670"
                     /db_xref="CDD:441276"
     CDS             1..176
                     /gene="LOC121212763"
                     /coded_by="XM_041086210.1:43..573"
                     /db_xref="GeneID:121212763"
ORIGIN      
        1 mevdlskitl rpfkledadd fllfagddqv tnylrwqtls skqealdhik dvciphpwrr
       61 sicndncsig fisifpfsge edrfkanigf gvavkywghg iatkavkmav pqffvdfpdv
      121 vrleafidaq nlgsqrvvek tgfqkegmlr kyaymkgklr dmfiysflst dlpanp
//
LOCUS       XP_040942145             619 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: probable methyltransferase PMT5 [Gossypium
            hirsutum].
ACCESSION   XP_040942145
VERSION     XP_040942145.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086211.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053436.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A13"
     Protein         1..619
                     /product="LOW QUALITY PROTEIN: probable methyltransferase
                     PMT5"
                     /calculated_mol_wt=69564
     Region          95..614
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..619
                     /gene="LOC107896578"
                     /coded_by="XM_041086211.1:653..2512"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107896578"
ORIGIN      
        1 mrspllnkls vifgprppvs wlllcfvsvl aliavfgsss snsfdsvtst pvpeiftnyr
       61 rlkeqaavdy felrtilsgs srqrelglcc kerenyvpcy nvtanlisgf kdgeefdrrc
      121 evprqgswcl vrppkdykip lrwpagrdvi wsgnikitkd qflssggvtk rimlleenqi
      181 afhpedglif dgvkdysrqi aemlglgsds elfqagvrtv ldigcgfgsf gahlvslklm
      241 tlciaayeat gsqvqlaler glpamignfi srqlpypsls fdmvhcaqcg ivwdkkegif
      301 lieidrllkp ggyfvltspt skpqgsstsm kkrnmltple qytxkicwsl iaqqddtfiw
      361 qktadahcys snkkndvplc kegydapyyq alvpcisgts skrwipiqnr ssssdlssae
      421 levhgvsped ffedlqvwkl alknywsllt plifsdhpkr pgdedplppf nmvrnvmdmn
      481 ahygglnaaf leerksvwvm nvvpvrahnt lplildrgfl gvlhdwcepf ptyprtydll
      541 hangllshlt sercglmelf iemdrilrpe gwvvlsdklg vielarahat qirwdarvid
      601 lqngsderll vcqrpfvkk
//
LOCUS       XP_016671886             408 aa            linear   PLN 06-AUG-2024
DEFINITION  omega-3 fatty acid desaturase, chloroplastic-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016671886
VERSION     XP_016671886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816397.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..408
                     /product="omega-3 fatty acid desaturase,
                     chloroplastic-like isoform X1"
                     /calculated_mol_wt=46860
     Region          1..407
                     /region_name="Membrane-FADS-like"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     cl00615"
                     /db_xref="CDD:445012"
     Site            order(157,161,193,196..197,333,336..337)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239584"
     CDS             1..408
                     /gene="LOC107891556"
                     /gene_synonym="FAD78-3D"
                     /coded_by="XM_016816397.2:55..1281"
                     /db_xref="GeneID:107891556"
ORIGIN      
        1 mesflisksg lkplpriyir pitglvprny fskprflhts kcfsdlkvtt plkvasveed
       61 eeinermhgi nkigeqeeet ifdpaapppf nladvratip qhcwvkdpwk smsyvvrdva
      121 lvlslaaavv yvnnwlvwpl ywvaqgtmfw alfvlghdcg hgsfsnnpkl nslvghllhs
      181 filvpyhgwr ishrihhqnq ghvendeswh pltektymsl dnneltwrfk fpfpllvypf
      241 ylwgrspgkt gshfdpnsel fvpserkdvi tsslcwtama ailvglgftm gpmlllklyg
      301 vpywewsyir gglttldrdy gwmnnihhdi gthvihhlfp qiphyhliea tkaakpvlgk
      361 yyrepersgp ipfyligvfi rslkedhyvs dtgdvvyykt dpnifksa
//
LOCUS       XP_016702831             344 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC transcription factor 56-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702831
VERSION     XP_016702831.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847342.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..344
                     /product="NAC transcription factor 56-like isoform X1"
                     /calculated_mol_wt=37938
     Region          25..151
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..344
                     /gene="LOC107917926"
                     /coded_by="XM_016847342.2:110..1144"
                     /db_xref="GeneID:107917926"
ORIGIN      
        1 mmlffsgvam estdsstgsq qpnlppgfrf hptdeelvvh ylkkkassap lpvaiiaevd
       61 lykfdpwelp akatfgeqew yffsprdrky pngarpnraa tsgywkatgt dkpvltsggt
      121 qkvgvkkalv fyggkppkgi ktnwimheyr ladnktnnkp pgcdlgnkkn slrlddwvlc
      181 riykknnanr plehdkddsm ddmlgtvpps isigsqhnpk fhfstkgtsf gtllehqehn
      241 slfdgmmgsd gtnsasmvnp lkrtlpslyw tddetagpst skrfhgdnnd gsmektdgng
      301 siatllsqlp qtpplqqqqa amlgsmgdgi frpphqlpgl nwys
//
LOCUS       XP_040942177             167 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942177
VERSION     XP_040942177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086243.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="uncharacterized isoform X1"
                     /calculated_mol_wt=18246
     Region          121..>149
                     /region_name="zf-DNL"
                     /note="DNL zinc finger; pfam05180"
                     /db_xref="CDD:461571"
     CDS             1..167
                     /gene="LOC107917983"
                     /gene_synonym="ZFP130"
                     /coded_by="XM_041086243.1:186..689"
                     /db_xref="GeneID:107917983"
ORIGIN      
        1 mealssqpla llsifspkpk dfpariirfp thskkdgnds diqydpnnts ivplvgnqtf
       61 sqdaamglvl saasvrgwtt gsgmegpsvp artdddqsnt eqvstfpwsl ftksprrrmr
      121 vaftcnvcgq rttrainpha ytdgtvfvqv tclnvvdamf stswwii
//
LOCUS       XP_016706463             290 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 13A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706463
VERSION     XP_016706463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850974.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="squamosa promoter-binding-like protein 13A
                     isoform X1"
                     /calculated_mol_wt=31955
     Region          24..98
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..290
                     /gene="LOC107921105"
                     /gene_synonym="SPL8"
                     /coded_by="XM_016850974.2:609..1481"
                     /db_xref="GeneID:107921105"
ORIGIN      
        1 mepsssapfk rarppgnrnq vpsclvdgct adlsqcrdyh rrhkvcevhs ktpkviirgq
       61 eqrfcqqcsr fhclaefdeg krscrkrldg hnrrrrkpqp qpqphslsvn pgrclsnlqg
      121 srhlpssspq ifattaitss wlgtakmepd igsessrngf frgsfphsyk reeqlsllqt
      181 nhsslhgvsv yqlpllsngv gssqkmfsna idsdralsll ssqpaetrei glkpmvlsgp
      241 tsslipnmqy ngvamegehv latdgndntn iygqemfgsa ngtsqrlsfs
//
LOCUS       XP_016706464             290 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 13A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706464
VERSION     XP_016706464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850975.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="squamosa promoter-binding-like protein 13A
                     isoform X1"
                     /calculated_mol_wt=31955
     Region          24..98
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..290
                     /gene="LOC107921105"
                     /gene_synonym="SPL8"
                     /coded_by="XM_016850975.2:667..1539"
                     /db_xref="GeneID:107921105"
ORIGIN      
        1 mepsssapfk rarppgnrnq vpsclvdgct adlsqcrdyh rrhkvcevhs ktpkviirgq
       61 eqrfcqqcsr fhclaefdeg krscrkrldg hnrrrrkpqp qpqphslsvn pgrclsnlqg
      121 srhlpssspq ifattaitss wlgtakmepd igsessrngf frgsfphsyk reeqlsllqt
      181 nhsslhgvsv yqlpllsngv gssqkmfsna idsdralsll ssqpaetrei glkpmvlsgp
      241 tsslipnmqy ngvamegehv latdgndntn iygqemfgsa ngtsqrlsfs
//
LOCUS       XP_016706465             290 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 13A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706465
VERSION     XP_016706465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850976.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="squamosa promoter-binding-like protein 13A
                     isoform X1"
                     /calculated_mol_wt=31955
     Region          24..98
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..290
                     /gene="LOC107921105"
                     /gene_synonym="SPL8"
                     /coded_by="XM_016850976.2:614..1486"
                     /db_xref="GeneID:107921105"
ORIGIN      
        1 mepsssapfk rarppgnrnq vpsclvdgct adlsqcrdyh rrhkvcevhs ktpkviirgq
       61 eqrfcqqcsr fhclaefdeg krscrkrldg hnrrrrkpqp qpqphslsvn pgrclsnlqg
      121 srhlpssspq ifattaitss wlgtakmepd igsessrngf frgsfphsyk reeqlsllqt
      181 nhsslhgvsv yqlpllsngv gssqkmfsna idsdralsll ssqpaetrei glkpmvlsgp
      241 tsslipnmqy ngvamegehv latdgndntn iygqemfgsa ngtsqrlsfs
//
LOCUS       XP_016706533             779 aa            linear   PLN 06-AUG-2024
DEFINITION  ent-kaur-16-ene synthase, chloroplastic-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706533
VERSION     XP_016706533.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706533.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..779
                     /product="ent-kaur-16-ene synthase, chloroplastic-like
                     isoform X1"
                     /calculated_mol_wt=88797
     Region          9..779
                     /region_name="PLN02279"
                     /note="ent-kaur-16-ene synthase"
                     /db_xref="CDD:177918"
     CDS             1..779
                     /gene="LOC107921168"
                     /gene_synonym="KS"
                     /coded_by="XM_016851044.2:237..2576"
                     /db_xref="GeneID:107921168"
ORIGIN      
        1 mslfhphscs npfisvstds ganptadtns sndlcfkdsk qrikkmfnqi elsvssydta
       61 wvamvpspts hcnpcfpacl nwlldnqlpn gswgpcrphp llikdtlsst lacvlalrrw
      121 gvgeehmtkg lrfieshfcs asdesqltpi gfdiifsgmv eyardlnlnl plrstdidal
      181 fhkrdlqlrr enskgreayl ayvsegigkh qdwemvmkyq rkngslfnsp sataatlshl
      241 pnsgclhylt alldkfenav ptlhpfhvfp rlcmletves lgigqhfree itsvldetyr
      301 cwlqgeeeif ldlptcalaf rilrvngydv ssaltgfaee hffnslggyl kdldavvelf
      361 rasqmiihpn eqllekhisw tshflkqels ntskcaykhk qnimqkvnda lefphyasle
      421 rlvyrrnivn ydvddirmlk ssysslsign kdflrlaved fnacqsiyre elkqlerwvr
      481 ekrldklkfa rqklaycyfs aaatlcspel sdarltwakn gvlttvvddf fdvggsedel
      541 lnliqlvekq dldvsidccs eeveiiysal dntiseigek aiawqgrnik thvseiwldl
      601 lrsmlqeaqw skekavptvd eymrngyisf algpiilpal yfvgprlsea vvksgeysll
      661 frhvstcgrl lndihsfkre smegklnavs lhiihgtnsv tedhvnqelk hlieerrrel
      721 hrlvlqknds ivprqckelf wkmskvlhlf ymkddgftsh emanavnavi hepilvdql
//
LOCUS       XP_016706534             654 aa            linear   PLN 06-AUG-2024
DEFINITION  ent-kaur-16-ene synthase, chloroplastic-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706534
VERSION     XP_016706534.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706534.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..654
                     /product="ent-kaur-16-ene synthase, chloroplastic-like
                     isoform X2"
                     /calculated_mol_wt=75053
     Region          3..654
                     /region_name="PLN02279"
                     /note="ent-kaur-16-ene synthase"
                     /db_xref="CDD:177918"
     CDS             1..654
                     /gene="LOC107921168"
                     /gene_synonym="KS"
                     /coded_by="XM_016851045.2:95..2059"
                     /db_xref="GeneID:107921168"
ORIGIN      
        1 mtkglrfies hfcsasdesq ltpigfdiif sgmveyardl nlnlplrstd idalfhkrdl
       61 qlrrenskgr eaylayvseg igkhqdwemv mkyqrkngsl fnspsataat lshlpnsgcl
      121 hyltalldkf enavptlhpf hvfprlcmle tveslgigqh freeitsvld etyrcwlqge
      181 eeifldlptc alafrilrvn gydvssealt gfaeehffns lggylkdlda vvelfrasqm
      241 iihpneqlle khiswtshfl kqelsntskc aykhkqnimq kvndalefph yaslerlvyr
      301 rnivnydvdd irmlkssyss lsignkdflr lavedfnacq siyreelkql erwvrekrld
      361 klkfarqkla ycyfsaaatl cspelsdarl twakngvltt vvddffdvgg sedellnliq
      421 lvekqdldvs idccseevei iysaldntis eigekaiawq grnikthvse iwldllrsml
      481 qeaqwskeka vptvdeymrn gyisfalgpi ilpalyfvgp rlseavvksg eysllfrhvs
      541 tcgrllndih sfkresmegk lnavslhiih gtnsvtedhv nqelkhliee rrrelhrlvl
      601 qkndsivprq ckelfwkmsk vlhlfymkdd gftshemana vnavihepil vdql
//
LOCUS       XP_040942416             159 aa            linear   PLN 06-AUG-2024
DEFINITION  anaerobic nitrite reductase HB2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942416
VERSION     XP_040942416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086482.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="anaerobic nitrite reductase HB2 isoform X1"
                     /calculated_mol_wt=17966
     Region          3..150
                     /region_name="class1-2_nsHbs_Lbs"
                     /note="Class1 nonsymbiotic hemoglobins (nsHbs), class II
                     nsHbs, leghemoglobins (Lbs,) and related proteins;
                     cd08923"
                     /db_xref="CDD:381261"
     Site            order(43..46,59,63,66..67,70..71,93..94,97..98,101,103,
                     107..108,111,140,143..144,147)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381261"
     CDS             1..159
                     /gene="LOC107921289"
                     /gene_synonym="GLB2; HB2"
                     /coded_by="XM_041086482.1:169..648"
                     /db_xref="GeneID:107921289"
ORIGIN      
        1 mgftekqegl vkeswevlkq diphsslrff slileiapga knmfsflres eeipqnnpkl
       61 kahavkvfkm tcesaiqlre kgevvvadtt lkylgtvhvk sgvkdphfev vkeallrtie
      121 eaigeekwne emknawgeay dqlaeaikae mknhhdeta
//
LOCUS       XP_016706734             334 aa            linear   PLN 06-AUG-2024
DEFINITION  heat stress transcription factor B-4-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706734
VERSION     XP_016706734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851245.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..334
                     /product="heat stress transcription factor B-4-like
                     isoform X1"
                     /calculated_mol_wt=37382
     Region          22..313
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          22..114
                     /region_name="HSF"
                     /note="heat shock factor; smart00415"
                     /db_xref="CDD:214654"
     CDS             1..334
                     /gene="LOC107921387"
                     /gene_synonym="HSF2"
                     /coded_by="XM_016851245.2:207..1211"
                     /db_xref="GeneID:107921387"
ORIGIN      
        1 malmvdnceg vllslephqa vpapfltkty qlvddpttdh ivswgeddtt fvvwrppefa
       61 rdllpnyfkh nnfssfvrql ntygfrkivp erwefaneff kkggkhllce ihrrktaqps
      121 inhhyhphip hsalnapsff pfpsqvsisp tdmddsppls sprgatggyg ssvtalsedn
      181 erlrrsnsll mselthmrkl ysdiiyfvqn hvkpvtpgns yspslllsgp ppavntntsl
      241 lqkplnqflg yypkspnpqf qglnsptats qssltiveep ssnscktrlf gvplqskkrl
      301 hpeystaanm etskarlvle kddlrlnlmp sstc
//
LOCUS       XP_016707282            1081 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 14 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707282
VERSION     XP_016707282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851793.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1081
                     /product="squamosa promoter-binding-like protein 14
                     isoform X1"
                     /calculated_mol_wt=119460
     Region          152..225
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <828..>965
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     CDS             1..1081
                     /gene="LOC107921988"
                     /gene_synonym="SPL14"
                     /coded_by="XM_016851793.2:579..3824"
                     /db_xref="GeneID:107921988"
ORIGIN      
        1 medagaqvap plyihqalas rfcdppslpr krdlsyqasd flyqnpsqqr vanprdnwnp
       61 kqwewdavrf iakplnteil qagtataeqr kkghvngnen sitsknataa ngdderlqln
      121 lggglnsvee pvsrpnkkvr ggspgstsyp mcqvdncked lsnakdyhrr hkvceihska
      181 tkalvekqmq rfcqqcsrfh plsefdegkr scrrrlaghn rrrrktqped vtsrlllpvn
      241 rdnagngsld ivnlltllar tqgkteeksi npslvpnrdq llqilskins lplpmelaak
      301 lpnvgvlnrk sqeqpslgnq nqlngkntss pstvdllaal sasltssssd alamlsqrss
      361 qssdsqktks icpdnvaass slnrapleft svggerssts yqspvedsec qiqetranlp
      421 lqlfsssped dsppmlassr kyfssdssnp meerspsssp vvqkffpmhs tpeavkyekv
      481 pigrhantna etsrahgsii plelfsgskr gtghgsfqhf psqagytsss gsdhsppsln
      541 sdaqdrtgri ifklfdkdps hfpgtlrtqi ynwlsnspse mesyirpgcv vlsvyvsmpa
      601 aaweqlegnl lryvncllqd sdsnfwrkar flvhtgnrql ashkdgkihl ckswlswssp
      661 elisvsplav vsgqetsllv rgrnltnpgt eihcaymggy ssmqingsty kgasydevnm
      721 gsfkiqvpsp kalgrcfiev engfkgnsfp iiiadaaick elrlleseld teakasdiis
      781 eehaydshrp rsreevlhfl nelgwlfqrs taplpkssdh slrrfkfllm fsvesdycal
      841 vkvlldmlve snldlddlsk dslamlseiq lltravkrrc rkmadllihy sissndgnsk
      901 kyifppnleg aggitplhla actsgsddmv dvltndpqei gltcwsslld angqspyaya
      961 mmrnnhsynk lvagkyadrr ngqfsltigv edqhsgvsav qlnkislqfr qdrrscakca
     1021 vvatrsnnrf pgsqrllqrp yvhsmlaiaa vcvcvclflr gspnigrvsp fkwenldfgt
     1081 i
//
LOCUS       XP_040942179            1081 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 14 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942179
VERSION     XP_040942179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086245.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1081
                     /product="squamosa promoter-binding-like protein 14
                     isoform X1"
                     /calculated_mol_wt=119460
     Region          152..225
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <828..>965
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     CDS             1..1081
                     /gene="LOC107921988"
                     /gene_synonym="SPL14"
                     /coded_by="XM_041086245.1:599..3844"
                     /db_xref="GeneID:107921988"
ORIGIN      
        1 medagaqvap plyihqalas rfcdppslpr krdlsyqasd flyqnpsqqr vanprdnwnp
       61 kqwewdavrf iakplnteil qagtataeqr kkghvngnen sitsknataa ngdderlqln
      121 lggglnsvee pvsrpnkkvr ggspgstsyp mcqvdncked lsnakdyhrr hkvceihska
      181 tkalvekqmq rfcqqcsrfh plsefdegkr scrrrlaghn rrrrktqped vtsrlllpvn
      241 rdnagngsld ivnlltllar tqgkteeksi npslvpnrdq llqilskins lplpmelaak
      301 lpnvgvlnrk sqeqpslgnq nqlngkntss pstvdllaal sasltssssd alamlsqrss
      361 qssdsqktks icpdnvaass slnrapleft svggerssts yqspvedsec qiqetranlp
      421 lqlfsssped dsppmlassr kyfssdssnp meerspsssp vvqkffpmhs tpeavkyekv
      481 pigrhantna etsrahgsii plelfsgskr gtghgsfqhf psqagytsss gsdhsppsln
      541 sdaqdrtgri ifklfdkdps hfpgtlrtqi ynwlsnspse mesyirpgcv vlsvyvsmpa
      601 aaweqlegnl lryvncllqd sdsnfwrkar flvhtgnrql ashkdgkihl ckswlswssp
      661 elisvsplav vsgqetsllv rgrnltnpgt eihcaymggy ssmqingsty kgasydevnm
      721 gsfkiqvpsp kalgrcfiev engfkgnsfp iiiadaaick elrlleseld teakasdiis
      781 eehaydshrp rsreevlhfl nelgwlfqrs taplpkssdh slrrfkfllm fsvesdycal
      841 vkvlldmlve snldlddlsk dslamlseiq lltravkrrc rkmadllihy sissndgnsk
      901 kyifppnleg aggitplhla actsgsddmv dvltndpqei gltcwsslld angqspyaya
      961 mmrnnhsynk lvagkyadrr ngqfsltigv edqhsgvsav qlnkislqfr qdrrscakca
     1021 vvatrsnnrf pgsqrllqrp yvhsmlaiaa vcvcvclflr gspnigrvsp fkwenldfgt
     1081 i
//
LOCUS       XP_016707468             648 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin efflux carrier component 4-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707468
VERSION     XP_016707468.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851979.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..648
                     /product="auxin efflux carrier component 4-like isoform
                     X1"
                     /calculated_mol_wt=70654
     Region          9..>190
                     /region_name="Mem_trans"
                     /note="Membrane transport protein; pfam03547"
                     /db_xref="CDD:308904"
     Region          <487..647
                     /region_name="Mem_trans"
                     /note="Membrane transport protein; cl22894"
                     /db_xref="CDD:451441"
     CDS             1..648
                     /gene="LOC107922128"
                     /gene_synonym="PIN3a"
                     /coded_by="XM_016851979.2:339..2285"
                     /db_xref="GeneID:107922128"
ORIGIN      
        1 miswndlytv ltaviplyva milaygsvrw wkiftpdqcs ginrfvaifa vpllsfhfis
       61 tndpyamnfr fvaadtlqkl imlfvlglwt nltrngslew mitifslstl pntlvmgipl
      121 liamygpysg mlmvqvvvlq ciiwytlllf lfeyrgakil imeqfpetaa sivsfkvdsd
      181 vvsldgrdfl etdaeigedg klhvkvrksn asrrslgpcs lpaltprpsn ltgaeiysls
      241 ssrnptprgs nfnnsdfysm mgvqgfparh snfgpadlys vqssrgptpr psnfeenntv
      301 msprfgfypa qtvpssypap npefssvtkn akatqqqqqq pvqpqqqpke kennkenhda
      361 kelhmfvwss saspvseggg lhvfggtdfg aseqsgrseq gakeirmlva dhpqngenka
      421 cegmtgsgdv ngedfsfagr dgeeerekeg pnglnklgss staelhpkaa ggpesgvgkq
      481 mppasvmtrl ilimvwrkli rnpntyssli glvwsliafr whvsmpkiie ksisilsdag
      541 lgmamfslgl fmalqpkiia cgnsvatfam avrfltgpav maaasiavgl rgtllrvaiv
      601 qaalpqgivp fvfakeynvh pailstavif gmlialpitl vyyillgl
//
LOCUS       XP_016707692             228 aa            linear   PLN 06-AUG-2024
DEFINITION  probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707692
VERSION     XP_016707692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="probable CDP-diacylglycerol--inositol
                     3-phosphatidyltransferase 2 isoform X1"
                     /calculated_mol_wt=25656
     Region          7..>111
                     /region_name="PgsA"
                     /note="Phosphatidylglycerophosphate synthase [Lipid
                     transport and metabolism]; COG0558"
                     /db_xref="CDD:440324"
     CDS             1..228
                     /gene="LOC107922264"
                     /gene_synonym="PIS"
                     /coded_by="XM_016852203.2:331..1017"
                     /db_xref="GeneID:107922264"
ORIGIN      
        1 mpnnkskprp srmsvylyip niigyirill ncyafaiwfs skrlfaalyf lsfvcdavdg
       61 wcarkfnqas tfgavldmvt dristacllv ilsqvyrpsl vflsllaldi ashwlqmyss
      121 flvgkashkd vkdssnwlfk lyygnrmfmg yccvacevly ialflisskh tenlmdvvvt
      181 tlkqgsplsl lvaisllgcs ikqviniiqm ktaadacvly dtekkqkr
//
LOCUS       XP_016724291             865 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724291
VERSION     XP_016724291.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868802.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724291.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..865
                     /product="uncharacterized isoform X1"
                     /calculated_mol_wt=97845
     Region          1..414
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
     Region          566..838
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..865
                     /gene="LOC107936133"
                     /gene_synonym="CPA-FAS-2"
                     /coded_by="XM_016868802.2:493..3090"
                     /db_xref="GeneID:107936133"
ORIGIN      
        1 mevavigggi kglvsayvlv kagvdvvvye keeqlgghak tvnfdavdld lgflflnpar
       61 yatlldiids lgvdvetsdv sfsishdkgn ngyewcsqyg fsnyfaqkkk llnpfnwqnl
      121 reiirfsndv esylgslenn pdidrtetlg qfikskgyse nfqntylapi cgsmwssske
      181 dvmsfsafsi lsfcrthhly qqfgqpqwlt ikghshfvkr vrevletkgc qfklgcevqs
      241 vlpadngttm vcgdgfqety ngcimavdap talkllgnqa tfeetrvlga fqyatsdifl
      301 hrdstlmpqn ksawsalnfl nssknnaflt ywlnalqnig ktsepffvtv npdhtpkntl
      361 lkwstghaip svaaskasle lgqiqgkrgi wfcgydfnqd elkagmdaah gilgkhssvl
      421 hspksmspsf mettarlfvt kffqqyismg cvifleeggr iftfkgnmek cplktvlkvh
      481 npqfywrimk eadigladay ihgdfsflde tegllnlfri lvankensaa sgsnkrrtww
      541 spalltasis sakyfvkhll rqntitqarr nisrhydlsn elftlylgkm mqyssgvfrt
      601 geehldvaqr rkisslieka riekrhevld igcgwgslai etvkrtgcky tgitlseqql
      661 kyaqekvkea glqdnikill cdyrqlpkeh qfdriisvem vehvgeeyie efyrccdqll
      721 kedglfvlqf isipeelske iqqtagflke yifpggtlls ldrnlsamaa atrfsvehve
      781 nigmsyyhtl rwwrklflen tskvlalgfd ekfmrtweyy fdycaagfkt gtlidyqvvf
      841 sragnfgtlg dpykgfpsay sfmdd
//
LOCUS       XP_016724320             320 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor JUNGBRUNNEN 1-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724320
VERSION     XP_016724320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868831.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..320
                     /product="transcription factor JUNGBRUNNEN 1-like isoform
                     X1"
                     /calculated_mol_wt=36244
     Region          22..155
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..320
                     /gene="LOC107936158"
                     /coded_by="XM_016868831.2:301..1263"
                     /db_xref="GeneID:107936158"
ORIGIN      
        1 mmtvddvqgv ndnkadhedi qlpgfrfhpt deelvgfylk rkvekkplrf elikqidiyk
       61 fdpwdlpkas mvggggeses yffckrgrky rnsvrpnrvt gsgfwkatgi dkpvyaqtgd
      121 hqglaciglk ktlvyyrgaa gkgtktdwmm hefrlpyphe sttvvafsnp kfaaqeaevw
      181 ticrifkrns slkkhkqdwr qitakraslt taptsqtcsv esksnvqgky itfgspfivd
      241 yhqyhndeek pstlvnhhni sgknqsqwhv tdrmssaata qipssmaass ssfsnddfft
      301 eanwdelksv vefalepfpm
//
LOCUS       XP_016707638             859 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase CTR1 [Gossypium hirsutum].
ACCESSION   XP_016707638
VERSION     XP_016707638.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852149.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..859
                     /product="serine/threonine-protein kinase CTR1"
                     /calculated_mol_wt=94839
     Region          199..405
                     /region_name="EDR1"
                     /note="Ethylene-responsive protein kinase Le-CTR1;
                     pfam14381"
                     /db_xref="CDD:433922"
     Region          590..838
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(590..594,598,609,611,642,658..661,665,667,709,711,
                     713..714,716,727,730,746..749)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(590..594,598,609,611,642,658..661,665,709,711,
                     713..714,716,727)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(594,665,667,709,711,713,730,746..749)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(726..734,745..749)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..859
                     /gene="LOC107922232"
                     /coded_by="XM_016852149.2:194..2773"
                     /db_xref="GeneID:107922232"
ORIGIN      
        1 mempgrrsny sllsqypddq ytvsisgapp pycdslssea tsnknkvkse rgltdwdqsl
       61 sqnqnqnqlq vnricggggg gntfassisl qrqssgssfg esslsgdyyv ptfsttaane
      121 idgfvyghdg scehvdlrtk iggsssgksw aqqteesyql qlalalrlss eatcaddpnf
      181 lgpdsddsai rgtssssasa eivshrfwvn gclsyfekvp dgfylihgvn pyvwtmctdl
      241 hehgriptid slrsvdhvvg spieaisvdr rsdlglkelq nrvhniscsc ittkevvdel
      301 aklvcsrmgg ssatgeddll lywrdcsddl kdclgsvvvp igslsaglcr hrallfkvla
      361 dtidlpcria kgckyckrdd assclvrfgh dreylvdlig npgylcepds llngpssisi
      421 ssplrfphlk paipaidfrs lakhyfsdce slnlvfddaa sgtfvdeekk lgnigternn
      481 lvqmssnmnd vsqlplrnia kppahdrdsq hllsiisskn iikdplkcip plghrdvpdl
      541 ilsdpiedst kdsrfakgnq lvpskkgrel vlevddldip wgdlvlreri gsgsfgtvhr
      601 aewngsdvav kilmeqdlhg erykeflsev aimkrlrhpn ivlfmgavth ppnlsivtey
      661 lsrgslyrll rkpgvrevld errrlsmayd vakgmnylhr rnppivhrdl kspnllvdkk
      721 ytvkvcdfgl srlkantfls sksaagtpew mapevlrdep sneksdvysf gvilwelatl
      781 qqpwgnlnpa qvvaavgfkg krldiprdln phvaaiiedc wtnepwkrps fsnimerlks
      841 linkpsttqp gradipvht
//
LOCUS       XP_016708137             460 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfite exporter TauE/SafE family protein 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016708137
VERSION     XP_016708137.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852648.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..460
                     /product="sulfite exporter TauE/SafE family protein 4
                     isoform X1"
                     /calculated_mol_wt=50621
     Region          85..>182
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
     Region          <346..438
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
     CDS             1..460
                     /gene="LOC107922560"
                     /coded_by="XM_016852648.2:237..1619"
                     /db_xref="GeneID:107922560"
ORIGIN      
        1 matkgfvlyl lsgfsiavls vlfiqksnnd nmnqssnlle spynlsttek vwpalelnwr
       61 lvmatvigfl gsacgtvggv ggggifvpml tlivgfdtks aaaiskcmim gasassvwyn
      121 lrvphptkev piidydlall fqpmlmlgit vgvalsvvfp ywlitvliii lflgtssrsf
      181 yrgiemwkee tilnkeltkp qesfvnsrge llidteyepl vpkeeksklq ilcfnlrwkr
      241 llvlatvwvl ftviqviknd vvpcttlywv lfclqfpiat lvfgyeatkl ykehkkrmst
      301 gnaetvcgas iqwsplniaf calcgilggt vggllgsggg filgplllei gvipqvasat
      361 atfvmmfsss lsvvefyllk rfpmpyalyl mgvsilagfw gqyfvrklit ilrraslivf
      421 ilsgvifasa ltmgvigier sirmihnhef mgfldfcssq
//
LOCUS       XP_016708138             423 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfite exporter TauE/SafE family protein 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016708138
VERSION     XP_016708138.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852649.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="sulfite exporter TauE/SafE family protein 4
                     isoform X2"
                     /calculated_mol_wt=46290
     Region          <309..401
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
     CDS             1..423
                     /gene="LOC107922560"
                     /coded_by="XM_016852649.2:235..1506"
                     /db_xref="GeneID:107922560"
ORIGIN      
        1 matkgfvlyl lsgfsiavls vlfiqksnnd nmnqssnlle spynlsttek vwpalelnwr
       61 lvmatvigfl gsacgtvggv ggggifvpml tlivgfdtks aaaiskcmim gasassvwyn
      121 lrvphptkev piidydlall fqpmlmlgit vgvalsvvfp ywlitvliii lflvlidtey
      181 eplvpkeeks klqilcfnlr wkrllvlatv wvlftviqvi kndvvpcttl ywvlfclqfp
      241 iatlvfgyea tklykehkkr mstgnaetvc gasiqwspln iafcalcgil ggtvggllgs
      301 gggfilgpll leigvipqva satatfvmmf ssslsvvefy llkrfpmpya lylmgvsila
      361 gfwgqyfvrk litilrrasl ivfilsgvif asaltmgvig iersirmihn hefmgfldfc
      421 ssq
//
LOCUS       XP_016708139             413 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfite exporter TauE/SafE family protein 4 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016708139
VERSION     XP_016708139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852650.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..413
                     /product="sulfite exporter TauE/SafE family protein 4
                     isoform X3"
                     /calculated_mol_wt=45418
     Region          85..>182
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
     CDS             1..413
                     /gene="LOC107922560"
                     /coded_by="XM_016852650.2:237..1478"
                     /db_xref="GeneID:107922560"
ORIGIN      
        1 matkgfvlyl lsgfsiavls vlfiqksnnd nmnqssnlle spynlsttek vwpalelnwr
       61 lvmatvigfl gsacgtvggv ggggifvpml tlivgfdtks aaaiskcmim gasassvwyn
      121 lrvphptkev piidydlall fqpmlmlgit vgvalsvvfp ywlitvliii lflgtssrsf
      181 yrgiemwkee tilnkeltkp qesfvnsrge llidteyepl vpkeeksklq ilcfnlrwkr
      241 llvlatvwvl ftviqviknd vvpcttlywv lfclqfpiat lvfgyeatkl ykehkkrmst
      301 gnaetvcgas iqwsplniaf calcgilggt vggllgsggg filgplllei gvipqvasat
      361 atfvmmfsss lsvvefyllk rfpmpygvig iersirmihn hefmgfldfc ssq
//
LOCUS       XP_040942183             376 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfite exporter TauE/SafE family protein 4 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942183
VERSION     XP_040942183.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086249.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..376
                     /product="sulfite exporter TauE/SafE family protein 4
                     isoform X4"
                     /calculated_mol_wt=41086
     Region          85..>160
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
     CDS             1..376
                     /gene="LOC107922560"
                     /coded_by="XM_041086249.1:231..1361"
                     /db_xref="GeneID:107922560"
ORIGIN      
        1 matkgfvlyl lsgfsiavls vlfiqksnnd nmnqssnlle spynlsttek vwpalelnwr
       61 lvmatvigfl gsacgtvggv ggggifvpml tlivgfdtks aaaiskcmim gasassvwyn
      121 lrvphptkev piidydlall fqpmlmlgit vgvalsvvfp ywlitvliii lflvlidtey
      181 eplvpkeeks klqilcfnlr wkrllvlatv wvlftviqvi kndvvpcttl ywvlfclqfp
      241 iatlvfgyea tklykehkkr mstgnaetvc gasiqwspln iafcalcgil ggtvggllgs
      301 gggfilgpll leigvipqva satatfvmmf ssslsvvefy llkrfpmpyg vigiersirm
      361 ihnhefmgfl dfcssq
//
LOCUS       XP_040942184             900 aa            linear   PLN 06-AUG-2024
DEFINITION  activating signal cointegrator 1 complex subunit 2 homolog isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040942184
VERSION     XP_040942184.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086250.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..900
                     /product="activating signal cointegrator 1 complex subunit
                     2 homolog isoform X1"
                     /calculated_mol_wt=99719
     Region          538..577
                     /region_name="CUE_ASCC2"
                     /note="CUE domain found in activating signal cointegrator
                     1 complex subunit 2 (ASCC2) and similar proteins; cd14364"
                     /db_xref="CDD:270547"
     CDS             1..900
                     /gene="LOC107933436"
                     /coded_by="XM_041086250.1:91..2793"
                     /db_xref="GeneID:107933436"
ORIGIN      
        1 msnrythgnr qdgdnrnnfq ksqkkfipkn qnqnpnpnpn pnpnpnpnpt slsnsirqpl
       61 pkqhdappss srlrmgengd wvpnratpss lsngnfvnyl pqdeavaagl saeeggldpv
      121 esqrvvdlln relscllkls prefwkqvag dtslheflds flqfrsrwyd fphrgvkgiv
      181 agvivgefel srrvfmmlyr issnrdpgar avdslsvndh avilqekkll dlpklldica
      241 iyghenddlt kllianalka qptihdnltg vlshflsivh tmhercstsl evllssgnhg
      301 dhgfdrlhtd flevmdfind tivsmdafit ayrtaavffs cpvemsygne elltalsrlh
      361 dnllpslqrg fqsstksgef tmltdiaisl kmlslrivkl gwklldicyl sdevfldghp
      421 iptaskmfpa tvedpfirad ilvqtlrein gvslqslenk kqdtflksve knckimskle
      481 nlqntgwifm ddeqfqylsg immfstkgia keqtpeppms tsatsskvqm dedaaimqsk
      541 isqvkdlfpd ygkgfiaacl evynqnpeev iqrilegtlh edvlaldtsl etmpvpksas
      601 tlsrndkgkg kmvdadkgkg kmvdadkgkg klvdiipvss ttvpvvnrqp vegpsvssss
      661 tvgrfmrksk ddspdsatld srdennslrk valisqyeye deyddsfddl glsvaesgae
      721 eteilsdkls snfgksqpes sgqtmpsskw gsrkkpqyyv kdgknysykv agsvavanan
      781 easlvtqaqe elihglgrgg nlplgavkkl veheeqtnqp dvsetggreq trnprgrgrr
      841 gggrqresqa eqdnlpdnte aeergnvgnh rgrgrrgggr hnnyrkdram nkhfsgltgf
//
LOCUS       XP_040942185             677 aa            linear   PLN 06-AUG-2024
DEFINITION  activating signal cointegrator 1 complex subunit 2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942185
VERSION     XP_040942185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086251.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..677
                     /product="activating signal cointegrator 1 complex subunit
                     2 isoform X2"
                     /calculated_mol_wt=74722
     Region          315..354
                     /region_name="CUE_ASCC2"
                     /note="CUE domain found in activating signal cointegrator
                     1 complex subunit 2 (ASCC2) and similar proteins; cd14364"
                     /db_xref="CDD:270547"
     CDS             1..677
                     /gene="LOC107933436"
                     /coded_by="XM_041086251.1:167..2200"
                     /db_xref="GeneID:107933436"
ORIGIN      
        1 mqekklldlp klldicaiyg henddltkll ianalkaqpt ihdnltgvls hflsivhtmh
       61 ercstslevl lssgnhgdhg fdrlhtdfle vmdfindtiv smdafitayr taavffscpv
      121 emsygneell talsrlhdnl lpslqrgfqs stksgeftml tdiaislkml slrivklgwk
      181 lldicylsde vfldghpipt askmfpatve dpfiradilv qtlreingvs lqslenkkqd
      241 tflksveknc kimsklenlq ntgwifmdde qfqylsgimm fstkgiakeq tpeppmstsa
      301 tsskvqmded aaimqskisq vkdlfpdygk gfiaaclevy nqnpeeviqr ilegtlhedv
      361 laldtsletm pvpksastls rndkgkgkmv dadkgkgkmv dadkgkgklv diipvssttv
      421 pvvnrqpveg psvsssstvg rfmrkskdds pdsatldsrd ennslrkval isqyeyedey
      481 ddsfddlgls vaesgaeete ilsdklssnf gksqpessgq tmpsskwgsr kkpqyyvkdg
      541 knysykvags vavananeas lvtqaqeeli hglgrggnlp lgavkklveh eeqtnqpdvs
      601 etggreqtrn prgrgrrggg rqresqaeqd nlpdnteaee rgnvgnhrgr grrgggrhnn
      661 yrkdramnkh fsgltgf
//
LOCUS       XP_016706249             471 aa            linear   PLN 06-AUG-2024
DEFINITION  tetratricopeptide repeat protein 38 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706249
VERSION     XP_016706249.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850760.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706249.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..471
                     /product="tetratricopeptide repeat protein 38 isoform X1"
                     /calculated_mol_wt=53746
     Region          47..410
                     /region_name="StaR_like"
                     /note="a well-conserved protein found in bacteria, plants,
                     and animals. A family member from Streptomyces
                     toyocaensis, StaR is part of a gene cluster involved in
                     the biosynthesis of glycopeptide antibiotics (GPAs),
                     specifically A47934. It has been speculated...; cd05804"
                     /db_xref="CDD:100115"
     Site            order(131..132,134,158,161..162,165..166,168..169,192,195,
                     200,203..204,207)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          156..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          191..221
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..471
                     /gene="LOC107920927"
                     /coded_by="XM_016850760.2:191..1606"
                     /db_xref="GeneID:107920927"
ORIGIN      
        1 megvkldrwg yevktssdsc isvinayyhq vlsygrnrkv ileapvldkd cvlanilaah
       61 flsssdpska pslieaanag ieqassyeka vfeavnylis qnrdddvave lhskllrdfp
      121 rdllslkraq ilcfymgrpd lsldlvqqvl prnqqenfiy gmlafpllel grmadaedaa
      181 kkgfeinnqd vwaqhavspn lchvlqykcq ykeavqfmee csnawsscss fmlthnwwhv
      241 avcyleghsp itkvrevydh ciwkelertd aiavevclna lglllrvfvr gkldifedrl
      301 kvlaaslsdq anwfmewhld llilwalaft eelpkaedll nglkfrlskm nkkkqqimqr
      361 amllaeamye ygrgnekqal eilgpdfday sfkiigasde qldvfnevwy tmllntgqvt
      421 kaiesiekqi pkregapflw rllekgyklt grqeaatige rarlletayf n
//
LOCUS       XP_040942187             468 aa            linear   PLN 06-AUG-2024
DEFINITION  tetratricopeptide repeat protein 38 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942187
VERSION     XP_040942187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086253.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="tetratricopeptide repeat protein 38 isoform X2"
                     /calculated_mol_wt=53477
     Region          47..407
                     /region_name="StaR_like"
                     /note="a well-conserved protein found in bacteria, plants,
                     and animals. A family member from Streptomyces
                     toyocaensis, StaR is part of a gene cluster involved in
                     the biosynthesis of glycopeptide antibiotics (GPAs),
                     specifically A47934. It has been speculated...; cd05804"
                     /db_xref="CDD:100115"
     Site            order(131..132,134,158,161..162,165..166,168..169,192,
                     196..197,200..201,204)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          156..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          191..218
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..468
                     /gene="LOC107920927"
                     /coded_by="XM_041086253.1:191..1597"
                     /db_xref="GeneID:107920927"
ORIGIN      
        1 megvkldrwg yevktssdsc isvinayyhq vlsygrnrkv ileapvldkd cvlanilaah
       61 flsssdpska pslieaanag ieqassyeka vfeavnylis qnrdddvave lhskllrdfp
      121 rdllslkraq ilcfymgrpd lsldlvqqvl prnqqenfiy gmlafpllel grmadaedaa
      181 kkgfeinnqd vwaqhaqlch vlqykcqyke avqfmeecsn awsscssfml thnwwhvavc
      241 yleghspitk vrevydhciw kelertdaia vevclnalgl llrvfvrgkl difedrlkvl
      301 aaslsdqanw fmewhldlli lwalafteel pkaedllngl kfrlskmnkk kqqimqraml
      361 laeamyeygr gnekqaleil gpdfdaysfk iigasdeqld vfnevwytml lntgqvtkai
      421 esiekqipkr egapflwrll ekgykltgrq eaatigerar lletayfn
//
LOCUS       XP_016706251             467 aa            linear   PLN 06-AUG-2024
DEFINITION  tetratricopeptide repeat protein 38 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016706251
VERSION     XP_016706251.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850762.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706251.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..467
                     /product="tetratricopeptide repeat protein 38 isoform X3"
                     /calculated_mol_wt=53349
     Region          47..406
                     /region_name="StaR_like"
                     /note="a well-conserved protein found in bacteria, plants,
                     and animals. A family member from Streptomyces
                     toyocaensis, StaR is part of a gene cluster involved in
                     the biosynthesis of glycopeptide antibiotics (GPAs),
                     specifically A47934. It has been speculated...; cd05804"
                     /db_xref="CDD:100115"
     Site            order(131..132,134,158,161..162,165..166,168..169,192,
                     195..196,199..200,203)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          156..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          191..217
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..467
                     /gene="LOC107920927"
                     /coded_by="XM_016850762.2:227..1630"
                     /db_xref="GeneID:107920927"
ORIGIN      
        1 megvkldrwg yevktssdsc isvinayyhq vlsygrnrkv ileapvldkd cvlanilaah
       61 flsssdpska pslieaanag ieqassyeka vfeavnylis qnrdddvave lhskllrdfp
      121 rdllslkraq ilcfymgrpd lsldlvqqvl prnqqenfiy gmlafpllel grmadaedaa
      181 kkgfeinnqd vwaqhalchv lqykcqykea vqfmeecsna wsscssfmlt hnwwhvavcy
      241 leghspitkv revydhciwk elertdaiav evclnalgll lrvfvrgkld ifedrlkvla
      301 aslsdqanwf mewhldllil walafteelp kaedllnglk frlskmnkkk qqimqramll
      361 aeamyeygrg nekqaleilg pdfdaysfki igasdeqldv fnevwytmll ntgqvtkaie
      421 siekqipkre gapflwrlle kgykltgrqe aatigerarl letayfn
//
LOCUS       XP_016707807             321 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707807
VERSION     XP_016707807.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707807.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..321
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X1"
                     /calculated_mol_wt=35211
     Region          25..295
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..321
                     /gene="LOC107922330"
                     /coded_by="XM_016852318.2:219..1184"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mrlsaainsf kssnliswkt tgklqqtlag cielsgktlh sgkvskvkiw pgfagegryf
       61 efhsnlipas idfvresllc ttlckdgyki rtvehllsal eakgidncri qiqsldsedt
      121 evevpffdgs anawveaieq vgrkealdrc gnnveklaph lsepfyvsrn dsfmaafpas
      181 kvhiscgidf pkvpaigcqw fssaalddsy ekhiacsrtf ciyeevehmc smglikggsl
      241 dnaivcsatk gwlnpplrfp depcrhkvld ligdlslfar sgsqgfpmar visfkvsals
      301 lslgvsvrln rvklnkkilv n
//
LOCUS       XP_016707808             316 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707808
VERSION     XP_016707808.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852319.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707808.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X2"
                     /calculated_mol_wt=34647
     Region          25..308
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..316
                     /gene="LOC107922330"
                     /coded_by="XM_016852319.2:125..1075"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mrlsaainsf kssnliswkt tgklqqtlag cielsgktlh sgkvskvkiw pgfagegryf
       61 efhsnlipas idfvresllc ttlckdgyki rtvehllsal eakgidncri qiqsldsedt
      121 evevpffdgs anawveaieq vgrkealdrc gnnveklaph lsepfyvsrn dsfmaafpas
      181 kvhiscgidf pkvpaigcqw fssaalddsy ekhiacsrtf ciyeevehmc smglikggsl
      241 dnaivcsatk gwlnpplrfp depcrhkvld ligdlslfar sgsqgfpmar visfkgghsl
      301 nadfvrrlsg itvqet
//
LOCUS       XP_040942188             316 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942188
VERSION     XP_040942188.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086254.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X2"
                     /calculated_mol_wt=34647
     Region          25..308
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..316
                     /gene="LOC107922330"
                     /coded_by="XM_041086254.1:219..1169"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mrlsaainsf kssnliswkt tgklqqtlag cielsgktlh sgkvskvkiw pgfagegryf
       61 efhsnlipas idfvresllc ttlckdgyki rtvehllsal eakgidncri qiqsldsedt
      121 evevpffdgs anawveaieq vgrkealdrc gnnveklaph lsepfyvsrn dsfmaafpas
      181 kvhiscgidf pkvpaigcqw fssaalddsy ekhiacsrtf ciyeevehmc smglikggsl
      241 dnaivcsatk gwlnpplrfp depcrhkvld ligdlslfar sgsqgfpmar visfkgghsl
      301 nadfvrrlsg itvqet
//
LOCUS       XP_016707809             308 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707809
VERSION     XP_016707809.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707809.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X3"
                     /calculated_mol_wt=33790
     Region          25..282
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..308
                     /gene="LOC107922330"
                     /coded_by="XM_016852320.2:125..1051"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mrlsaainsf kssnliswkt tgklqqtlag cielsgktlh sgkvskvkiw pgfagegryf
       61 efhsnlipas idfvresllc ttlckdgyki rtvehllsal eakgidncri qiqsldsedt
      121 eveaieqvgr kealdrcgnn veklaphlse pfyvsrndsf maafpaskvh iscgidfpkv
      181 paigcqwfss aalddsyekh iacsrtfciy eevehmcsmg likggsldna ivcsatkgwl
      241 npplrfpdep crhkvldlig dlslfarsgs qgfpmarvis fkvsalslsl gvsvrlnrvk
      301 lnkkilvn
//
LOCUS       XP_016707810             303 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016707810
VERSION     XP_016707810.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852321.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707810.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..303
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X4"
                     /calculated_mol_wt=33247
     Region          7..277
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..303
                     /gene="LOC107922330"
                     /coded_by="XM_016852321.2:111..1022"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mengklqqtl agcielsgkt lhsgkvskvk iwpgfagegr yfefhsnlip asidfvresl
       61 lcttlckdgy kirtvehlls aleakgidnc riqiqsldse dtevevpffd gsanawveai
      121 eqvgrkeald rcgnnvekla phlsepfyvs rndsfmaafp askvhiscgi dfpkvpaigc
      181 qwfssaaldd syekhiacsr tfciyeeveh mcsmglikgg sldnaivcsa tkgwlnpplr
      241 fpdepcrhkv ldligdlslf arsgsqgfpm arvisfkvsa lslslgvsvr lnrvklnkki
      301 lvn
//
LOCUS       XP_040942190             298 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942190
VERSION     XP_040942190.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086256.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..298
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X5"
                     /calculated_mol_wt=32683
     Region          7..290
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..298
                     /gene="LOC107922330"
                     /coded_by="XM_041086256.1:190..1086"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mengklqqtl agcielsgkt lhsgkvskvk iwpgfagegr yfefhsnlip asidfvresl
       61 lcttlckdgy kirtvehlls aleakgidnc riqiqsldse dtevevpffd gsanawveai
      121 eqvgrkeald rcgnnvekla phlsepfyvs rndsfmaafp askvhiscgi dfpkvpaigc
      181 qwfssaaldd syekhiacsr tfciyeeveh mcsmglikgg sldnaivcsa tkgwlnpplr
      241 fpdepcrhkv ldligdlslf arsgsqgfpm arvisfkggh slnadfvrrl sgitvqet
//
LOCUS       XP_016707811             295 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1,
            mitochondrial isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016707811
VERSION     XP_016707811.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707811.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..295
                     /product="probable UDP-3-O-acyl-N-acetylglucosamine
                     deacetylase 1, mitochondrial isoform X6"
                     /calculated_mol_wt=32407
     Region          25..295
                     /region_name="LpxC"
                     /note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
                     pfam03331"
                     /db_xref="CDD:460886"
     CDS             1..295
                     /gene="LOC107922330"
                     /coded_by="XM_016852322.2:125..1012"
                     /db_xref="GeneID:107922330"
ORIGIN      
        1 mrlsaainsf kssnliswkt tgklqqtlag cielsgktlh sgkvskvkiw pgfagegryf
       61 efhsnlipas idfvresllc ttlckdgyki rtvehllsal eakgidncri qiqsldsedt
      121 evevpffdgs anawveaieq vgrkealdrc gnnveklaph lsepfyvsrn dsfmaafpas
      181 kvhiscgidf pkvpaigcqw fssaalddsy ekhiacsrtf ciyeevehmc smglikggsl
      241 dnaivcsatk gwlnpplrfp depcrhkvld ligdlslfar sgsqgfpmar visfk
//
LOCUS       XP_016708081             459 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 74B1 [Gossypium hirsutum].
ACCESSION   XP_016708081
VERSION     XP_016708081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852592.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..459
                     /product="UDP-glycosyltransferase 74B1"
                     /calculated_mol_wt=51415
     Region          1..451
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(19..20,22,164,167..168,172,199,278,348,350,352..353,
                     356)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,278,348,350,352..353)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..459
                     /gene="LOC107922512"
                     /coded_by="XM_016852592.2:207..1586"
                     /db_xref="GeneID:107922512"
ORIGIN      
        1 mehkqfkghv illpypsqgh inpllqfakr laskgvkatl atthytfnsi caahigvepi
       61 sdgfdeggfs qagnvdfylk sfkeegsrsl sqliqkfkds stsvtcvvyd sflpwaldva
      121 kqhgiygasf ftnsaavcsi fsrihhgrla lpltpeskpl mlpglpplnf rdlptflrfp
      181 dsypaylamk lsqysnlnea dwvfdntfed legkeakgvs elwqakligp mvpsaylder
      241 ikgdrgygss lwkplseecm ewletkpsqs vvyisfgsmv slteeeteei araleesnlh
      301 ylwivreteq kklpkwfles nkekgmvvtw cnqlemlahp avgcfvthcg wnstleglsl
      361 gvpmvgvpkw adqltdakfv eeiwgigvra kedeegvvrr eelikclkev megergkdik
      421 snankwkela kkaiseggss decinkfvqh lmaiveqin
//
LOCUS       XP_016707843             374 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707843
VERSION     XP_016707843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..374
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41850
     CDS             1..374
                     /gene="LOC107922357"
                     /coded_by="XM_016852354.2:651..1775"
                     /db_xref="GeneID:107922357"
ORIGIN      
        1 mpltrysaet fgvlticlva llillglvci gysfylhsrv lrqgfiqlsy ftgpwiirit
       61 filfaiwwgf geitrlnflr rqgrvlnaln lkwqenickc yivsnlgfae pclfltlvfl
      121 lraplqnidt gilsrkwngk tagyvllycf plsvlqlili ligpelhker relppyftrt
      181 atrvmensds ialctyplln tillgvfatv msvylfwlgr rilnlvinkg lqkrvytlil
      241 svssflplrv lllglsvlsk peqfvfevla fsafvvllcc vgvcicmlic cpvvdcialg
      301 nlldvegrsd dqndaavsli gnqnhlvssp ernsrngsis frtfekdgta atgalvelsl
      361 tssfmdsksk qete
//
LOCUS       XP_016707552             739 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase At1g09600 [Gossypium
            hirsutum].
ACCESSION   XP_016707552
VERSION     XP_016707552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="probable serine/threonine-protein kinase
                     At1g09600"
                     /calculated_mol_wt=82271
     Region          156..440
                     /region_name="STKc_CDK9_like"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; cd07840"
                     /db_xref="CDD:270832"
     Site            order(162..165,170,183,185,202,216,234..237,240,242..243,
                     280,282,284..285,287,298,301,314,316..319,321,359..360)
                     /site_type="active"
                     /db_xref="CDD:270832"
     Site            order(162..165,170,183,185,216,234..237,240,243,284..285,
                     287,298)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270832"
     Site            order(194..196,198,201,205,208,218..221,223,230)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270832"
     Site            order(202,242,280,282,301,314,316..319,321,359..360)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270832"
     Site            order(297..308,313..321)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270832"
     CDS             1..739
                     /gene="LOC107922171"
                     /coded_by="XM_016852063.2:917..3136"
                     /db_xref="GeneID:107922171"
ORIGIN      
        1 mgcicskgsr aneyvennhg krdkahknsr ktakklsvsf krdnvvvead atarlilnqq
       61 pnhgavsgps sssddeekka alavferskg tpselqrrpt teadgrggqg rqrmsriina
      121 tggergaqvv agwpswlaav ageaingwip rkaesfekle kigqgtyssv ykardlesnk
      181 ivalkkvrfv nmdpesvcfm areiiilrrl dhpnvmkleg litsrasgsl ylifeymehd
      241 lagllatpev kfteaqikcy mqqllrgldh chsrgvlhrd ikgsnllidc ngnlkigdfg
      301 latffhpnqk qpltsrvvtl wyrppelllg stnygvavdl wssgcilael fagkpimpgr
      361 teveqlhkif klcgspsedy wkrsklphat ifkpqhpyks cvletfkdfp asalvllevl
      421 laiepecrgt assalqseff ttlplpcdps slpkyppske fdaklreees rrqraggkvh
      481 avdpvrkfsr esiavpapdf naelqasiqk rrgqfgaksi sevcypeedr gagfpiepsk
      541 gtervvynsh sgqlmhpvkf essrnkktte iesmkasara fgfprkpeel ktqtcvhrga
      601 velsrfsnsi avrgssrfdm tkenninphw peerfnsgyn hldnaessek hdlshglldr
      661 pkasnvkdeq psskesavgy vsmnnrihys gplmprggnl eemlkeherr iqnavlrars
      721 nktsakinfd dngqtesll
//
LOCUS       XP_016707854             437 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707854
VERSION     XP_016707854.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707854.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..437
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50207
     CDS             1..437
                     /gene="LOC107922368"
                     /coded_by="XM_016852365.2:109..1422"
                     /db_xref="GeneID:107922368"
ORIGIN      
        1 mtdhhhrfgq irstsqvlrq aavhftthpf tflflsvllf sfrclvesgs llltsfierd
       61 psfksllsrl dlhpshphar lhptrrpflh ltrvgtlddd ffssdddypd rslfgsfpnr
      121 pinstpvils nfdtrlgfsh svadngillp eivrhgvkfk tspfvyerne geqqeervvd
      181 fqfvykgfel grqdaatlff lvsflsfsyg wvilgftmiy slilgvlfvt vvndligrfv
      241 sfigafldgs kvglkrltgf vlmkwavrda vtqllglwyf geiedhysff klfvrlklmp
      301 fsvmspwirg fekeisgflf swflvdtlva fafslaawia ivdsrrtgre iieegcylms
      361 tllnqaiqik cyeaiamwvl tyiggehffa tvieaalely fmvawlifyf mvrcreasae
      421 grrygrrele vlvdglt
//
LOCUS       XP_016708157             413 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein SHOOT GRAVITROPISM 5 [Gossypium hirsutum].
ACCESSION   XP_016708157
VERSION     XP_016708157.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852668.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..413
                     /product="zinc finger protein SHOOT GRAVITROPISM 5"
                     /calculated_mol_wt=45702
     Region          62..82
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          139..158
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          166..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          304..>375
                     /region_name="V-ATPase_G_2"
                     /note="Vacuolar (H+)-ATPase G subunit; pfam16999"
                     /db_xref="CDD:339878"
     CDS             1..413
                     /gene="LOC107922578"
                     /coded_by="XM_016852668.2:315..1556"
                     /db_xref="GeneID:107922578"
ORIGIN      
        1 mldnnssisa aplpssssdp ltplengath krkrkpagtp dpdaevvsls pktllesdry
       61 vceicnqgfq rdqnlqmhrr rhkvpwkllk resqevkkrv fvcpeptclh hdpchalgdl
      121 vgikkhfrrk hsnqkqwvce kcskgyavqs dykahlktcg trghscdcgr vfsrvesfie
      181 hqdactirrv qpelqaqlqp aaacssrtas stspssdanf siaplhglpi tkstepvfly
      241 krvsgsdhqr qqlqhnlelq llpsstansr dsdeeyathl klsigsndgg eknasettle
      301 atrlkefasg qlklamaeka yaekarqeak rqiemaelef asakrirqqa qgelekaqal
      361 kdqatkkisa timqitcqtc khqfqtstaa gpddetslam symssatteg ege
//
LOCUS       XP_040942192             904 aa            linear   PLN 06-AUG-2024
DEFINITION  probable AMP deaminase [Gossypium hirsutum].
ACCESSION   XP_040942192
VERSION     XP_040942192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086258.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..904
                     /product="probable AMP deaminase"
                     /calculated_mol_wt=103706
     Region          9..902
                     /region_name="PLN02768"
                     /note="AMP deaminase"
                     /db_xref="CDD:215411"
     CDS             1..904
                     /gene="LOC107922389"
                     /coded_by="XM_041086258.1:145..2859"
                     /db_xref="GeneID:107922389"
ORIGIN      
        1 mdsstpipsl hlamaallga slmavsafyi hkrsvdhvid rlieirrecv pqarrprsrl
       61 vsdedeedee vdyeqdnrrl eieevdqcld hkssasksfd ekmevsrssr isssmpnval
      121 rnewfeedak fdqavrervq scsasslekl nfipsglppl qtswrgesqt fshggstmrl
      181 atygrlmtpr spggnaagds ddegtepade deilfadkni dvsvdllkdv atkvqnsfpl
      241 pfrgdsvnha rdktyqasgn eekscvnlvg kgnvdsasvg ifendpvftk tslplrstlh
      301 dstnveeeev rkmvreclel rdnyvyreei apwtkepvme pstpkascdp fhfepvekta
      361 hhfrmedgvi hvyasesgtv elfpvasstt fftdmhhllk vmsagnvrsa chhrlrflee
      421 kfrlhllvna dreflaqksa phrdfynirk vdthlhhsac mnqkhllsfi ksklrkepde
      481 vvifrdgkym tlkevfesld ltgydlnvdl ldvhadkstf hrfdkfnlky npcgqsrlre
      541 iflkqdnliq grflaevtkq vlsdletsky qmaeyrvsiy grkqsewdql aswfinneiy
      601 settvwliql prlynvykqm givksfqnil dnvfiplfev tvdpnshpql hvflkmvvgf
      661 dlvddeskpe rrptkhmptp aewtnefnpa ysyyayyfya nlytlnklre skglqtiklr
      721 phcgeagdid hlaaafllcn nishginlrk spvlqylyyl aqiglamspl snnslfldyh
      781 rnpfpsffqr glnvslssdd plqihltkea lveeysvaaq vwklsacdlc eiarnsvyqs
      841 gflhmsklhw lgnkyflrgp egndiqktnv pnmriafrhe twidemqyly sgraripeei
      901 dpam
//
LOCUS       XP_016715557             147 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715557
VERSION     XP_016715557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16501
     CDS             1..147
                     /gene="LOC107928798"
                     /coded_by="XM_016860068.2:243..686"
                     /db_xref="GeneID:107928798"
ORIGIN      
        1 meallseftf lsdqalqdkn fdpsniedlm klfeiesyka waameleqee evkeaetsmq
       61 qaegyldsvm eaamdefrrl eeemermaka elkdledtad karkmgnlme kaaaiaskky
      121 veaalnsata smksawkgls skkvhps
//
LOCUS       XP_040942193             237 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942193
VERSION     XP_040942193.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086259.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..237
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=26067
     CDS             1..237
                     /gene="LOC107922636"
                     /coded_by="XM_041086259.1:171..884"
                     /db_xref="GeneID:107922636"
ORIGIN      
        1 mefvtdpddq gsamavddvd tpeifgegvi vpltfkinaw nstflsclef diisnccqif
       61 fvviilvamp gtkknsdcsh igyafnklmk qighpelkty pkrikrrled dgifcsctss
      121 spgssvcgrd chcgmllssc ssgcscgssc lnkpfqhrpv kklklikqgd piletkkntk
      181 dqrfsvvtdk vsmevveefi leqlnltkgt iseikdnlet llqkdiqadl vccsics
//
LOCUS       XP_040942194             197 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHH3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942194
VERSION     XP_040942194.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086260.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="histone-lysine N-methyltransferase ASHH3 isoform
                     X2"
                     /calculated_mol_wt=21498
     Region          162..>189
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     CDS             1..197
                     /gene="LOC107922636"
                     /coded_by="XM_041086260.1:171..764"
                     /db_xref="GeneID:107922636"
ORIGIN      
        1 mefvtdpddq gsamavddvd tpeifgegvi vpltfkinaw nstflsclef diisnccqif
       61 fvviilvamp gtkknsdcsh igyafnklmk qighpelkty pkrikrrled dgifcsctss
      121 spgssvcgrd chcgmllssc ssgcscgssc lnkpfqhrpv kklkliktek cgegivaded
      181 ikhgefvaev lnrpfti
//
LOCUS       XP_040942195             179 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHH3 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942195
VERSION     XP_040942195.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086261.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="histone-lysine N-methyltransferase ASHH3 isoform
                     X3"
                     /calculated_mol_wt=19792
     CDS             1..179
                     /gene="LOC107922636"
                     /coded_by="XM_041086261.1:223..762"
                     /db_xref="GeneID:107922636"
ORIGIN      
        1 mlgiqpffpa wnlillnsdc shigyafnkl mkqighpelk typkrikrrl eddgifcsct
       61 ssspgssvcg rdchcgmlls scssgcscgs sclnkpfqhr pvkklklikq gdpiletkkn
      121 tkdqrfsvvt dkvsmevvee fileqlnltk gtiseikdnl etllqkdiqa dlvccsics
//
LOCUS       XP_040942196             169 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHH3 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942196
VERSION     XP_040942196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086262.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="histone-lysine N-methyltransferase ASHH3 isoform
                     X4"
                     /calculated_mol_wt=18580
     CDS             1..169
                     /gene="LOC107922636"
                     /coded_by="XM_041086262.1:387..896"
                     /db_xref="GeneID:107922636"
ORIGIN      
        1 mpgtkknsdc shigyafnkl mkqighpelk typkrikrrl eddgifcsct ssspgssvcg
       61 rdchcgmlls scssgcscgs sclnkpfqhr pvkklklikq gdpiletkkn tkdqrfsvvt
      121 dkvsmevvee fileqlnltk gtiseikdnl etllqkdiqa dlvccsics
//
LOCUS       XP_016706253             483 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid permease 6 [Gossypium hirsutum].
ACCESSION   XP_016706253
VERSION     XP_016706253.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="amino acid permease 6"
                     /calculated_mol_wt=53259
     Region          36..471
                     /region_name="Aa_trans"
                     /note="Transmembrane amino acid transporter protein;
                     pfam01490"
                     /db_xref="CDD:279788"
     CDS             1..483
                     /gene="LOC107920930"
                     /coded_by="XM_016850764.2:438..1889"
                     /db_xref="GeneID:107920930"
ORIGIN      
        1 makqmqktsv fieqspgdye ngdiqknldd dgrpkrtgtw vtasahiita vigsgvlsla
       61 waiaqlgwva gpavlmafsf ityftstlla dcyrapdpvh gkrnytymnv vraylggrkv
      121 qlcglaqyan lvgitigyti tasismvavk rsncfhkhgh hvkcqtsnyp fmvifaciql
      181 vlsqipnfdk lswlsivaai msfayssigl glsiakvagg ehvrtsltgv tvgvdvsgse
      241 kvwrtfqaig diafayayst vlieiqdtik ssppenksmk rassigvstt tlfyvlcgli
      301 gyaafgndap gnfltgfgfy epfwlidfan iciaihliga yqvfaqplfg fvegwcsrnw
      361 pnskfitseh avdvpfygiy ylnffrlvwr tayviitavv amifpffndf lgligagsfw
      421 pltvyfpiem hiaqsktpky sfrwiwlkil swvclvvsli aaagsvqgli qslktykpfq
      481 tqe
//
LOCUS       XP_016707207             163 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 4 [Gossypium hirsutum].
ACCESSION   XP_016707207
VERSION     XP_016707207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851718.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="basic leucine zipper 4"
                     /calculated_mol_wt=18896
     Region          57..108
                     /region_name="bZIP_plant_GBF1"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; cd14702"
                     /db_xref="CDD:269850"
     Region          57..108
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269850"
     Site            order(60..61,63..65,67..72,74..76)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     Site            order(75,78..79,82..83,85..86,89..90,92..93,96..97,
                     99..100,103..104,106..107)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269850"
     CDS             1..163
                     /gene="LOC107921899"
                     /coded_by="XM_016851718.2:131..622"
                     /db_xref="GeneID:107921899"
ORIGIN      
        1 mfsaeeavgs qlpvhesgft peelnellsf fesnepvssn sssenssrai yspdekkqrr
       61 kisnresakr srwrkkryle nltnqvnkmn ienrrlknrl hlvlnqchvv wvdneqlrse
      121 sfalwaklld lywtlaamqc nhdnsrhsls cfnsnklssh sin
//
LOCUS       XP_016706812             248 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive poly [ADP-ribose] polymerase SRO2 [Gossypium
            hirsutum].
ACCESSION   XP_016706812
VERSION     XP_016706812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851323.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..248
                     /product="probable inactive poly [ADP-ribose] polymerase
                     SRO2"
                     /calculated_mol_wt=27921
     CDS             1..248
                     /gene="LOC107921473"
                     /coded_by="XM_016851323.2:86..832"
                     /db_xref="GeneID:107921473"
ORIGIN      
        1 melmnqivee ddqdsvtiak dndgvpdams eddevessys fdffakndli kvhessyeys
       61 ivrtgffsgi eensskkiki laihktfnss fsakvkaknf qilakavark ccgdanikya
      121 wysaskdeic eilkhgfswy iktaenqycy rtsiylfaak fssdsvlgsk vdetgvrhll
      181 lcrvilgkqe lvtgncndwf hpsspefdsg vddlsaprky iiwstymnsh ilpcyiisfg
      241 apyevcia
//
LOCUS       XP_016707216             177 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707216
VERSION     XP_016707216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851727.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="proline-rich protein 1"
                     /calculated_mol_wt=19124
     Region          38..125
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..177
                     /gene="LOC107921920"
                     /coded_by="XM_016851727.1:19..552"
                     /db_xref="GeneID:107921920"
ORIGIN      
        1 markvlmmli aasllmgcsf neavgtvvag vqvihlggkv mcqdctksyg ewthgsqpik
       61 ggkvsvtckd drsriiyyas desdeegnfn mavnkyingk elqpksclvr lvssphltcn
      121 iptnfaggit gvnlpvrptv lyrdlvqyql gtffyttprc akpaagetnd sfdcdak
//
LOCUS       XP_016707433             584 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 8.3 [Gossypium hirsutum].
ACCESSION   XP_016707433
VERSION     XP_016707433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851944.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..584
                     /product="protein NRT1/ PTR FAMILY 8.3"
                     /calculated_mol_wt=64480
     Region          45..579
                     /region_name="MFS_NPF8"
                     /note="NRT1/PTR family (NPF), subfamily 8 of the Major
                     Facilitator Superfamily of transporters; cd17418"
                     /db_xref="CDD:340976"
     Site            order(58..59,62..63,66,99,171..172,174..176,179,205,
                     208..209,212,357,360..361,364..366,369,400,404,485..486,
                     490,494,510,513..514,517..518,521)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340976"
     CDS             1..584
                     /gene="LOC107922101"
                     /coded_by="XM_016851944.2:135..1889"
                     /db_xref="GeneID:107922101"
ORIGIN      
        1 mgsvdeersl leaeldqaes nglytgdgsv dfngnpvlkq stgnwracpf ilgneccerl
       61 ayygiaanlv syltkklheg nvsaarnvtt wqgtcyltpl igavladayw grywtiaafs
      121 tiyffgmctl tlsasipalk paecvgsicp satpaqyavf ffglylialg tggikpcvss
      181 fgadqfddtd pnervkkgsf fnwfyfsini galvsssllv wiqdnagwgi gfgipalfmg
      241 laigsffsgt alyrfqrpgg spltrmcqvl vaafhkrslk vpedstllye tgdkhsaieg
      301 srklehseel kcldkaaivt dvetksgdfs npwrlctvtq veelkilirm fpiwvtgivf
      361 savyaqmstm fveqgmmmdt kigsftippa slstfdvisv ifwvpiydri ivpiarkftr
      421 kergfselqr mgiglfisvl cmsaaavvei rrlqlakeld lvdkqvavpi silwqipqyf
      481 llgaaevctf igqleffydq spdamrslcs alsllttslg nylssfiltl vtyfttkggq
      541 igwisdnlne ghldyffwll aglsffnmlv ytlcasrykq kkas
//
LOCUS       XP_016707432             584 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 8.3 [Gossypium hirsutum].
ACCESSION   XP_016707432
VERSION     XP_016707432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..584
                     /product="protein NRT1/ PTR FAMILY 8.3"
                     /calculated_mol_wt=64480
     Region          45..579
                     /region_name="MFS_NPF8"
                     /note="NRT1/PTR family (NPF), subfamily 8 of the Major
                     Facilitator Superfamily of transporters; cd17418"
                     /db_xref="CDD:340976"
     Site            order(58..59,62..63,66,99,171..172,174..176,179,205,
                     208..209,212,357,360..361,364..366,369,400,404,485..486,
                     490,494,510,513..514,517..518,521)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340976"
     CDS             1..584
                     /gene="LOC107922101"
                     /coded_by="XM_016851943.2:172..1926"
                     /db_xref="GeneID:107922101"
ORIGIN      
        1 mgsvdeersl leaeldqaes nglytgdgsv dfngnpvlkq stgnwracpf ilgneccerl
       61 ayygiaanlv syltkklheg nvsaarnvtt wqgtcyltpl igavladayw grywtiaafs
      121 tiyffgmctl tlsasipalk paecvgsicp satpaqyavf ffglylialg tggikpcvss
      181 fgadqfddtd pnervkkgsf fnwfyfsini galvsssllv wiqdnagwgi gfgipalfmg
      241 laigsffsgt alyrfqrpgg spltrmcqvl vaafhkrslk vpedstllye tgdkhsaieg
      301 srklehseel kcldkaaivt dvetksgdfs npwrlctvtq veelkilirm fpiwvtgivf
      361 savyaqmstm fveqgmmmdt kigsftippa slstfdvisv ifwvpiydri ivpiarkftr
      421 kergfselqr mgiglfisvl cmsaaavvei rrlqlakeld lvdkqvavpi silwqipqyf
      481 llgaaevctf igqleffydq spdamrslcs alsllttslg nylssfiltl vtyfttkggq
      541 igwisdnlne ghldyffwll aglsffnmlv ytlcasrykq kkas
//
LOCUS       XP_016707434             289 aa            linear   PLN 06-AUG-2024
DEFINITION  short-chain dehydrogenase reductase ATA1 [Gossypium hirsutum].
ACCESSION   XP_016707434
VERSION     XP_016707434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851945.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..289
                     /product="short-chain dehydrogenase reductase ATA1"
                     /calculated_mol_wt=30114
     Region          26..278
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(36,38..39,41,60..62,108..110,160..162,175,179,
                     205..208)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(133,162,175,179)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..289
                     /gene="LOC107922102"
                     /coded_by="XM_016851945.2:52..921"
                     /db_xref="GeneID:107922102"
ORIGIN      
        1 mlaflvyame qgvdkhvdlq nssakrmigk vavvtggarg igaataklfa engayvviad
       61 ildetgtmla dsigaryihc dvakesdves aiqlaitwkg kldilfsnag iggtassits
      121 ldmeqvkhlv sinllgnvha ikhaaramlr cntkgsiict sssagimggl ashpyslska
      181 givglmrtaa celgvhgirv ncisphgvpt dmlisgyrmf rgnettpeev kklvgdqgsl
      241 lrgkaatved vaqaavflas ddtgfitahn liidggytsa isslsfiyk
//
LOCUS       XP_016706573             318 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor MOF1 [Gossypium hirsutum].
ACCESSION   XP_016706573
VERSION     XP_016706573.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851084.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..318
                     /product="myb family transcription factor MOF1"
                     /calculated_mol_wt=35343
     Region          19..72
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..318
                     /gene="LOC107921201"
                     /coded_by="XM_016851084.2:382..1338"
                     /db_xref="GeneID:107921201"
ORIGIN      
        1 mgscgrsgav rqyirskvpr lrwtpelhqc fvqaierlgg qdkatpklvl qlmdvkglti
       61 shvkshlqmy rsmrsdlsrq drssthqrrq sfekhdgcvd dvidimgfhs tskpieesds
      121 hlihsplpsk rarietkssi sdqnlqcsqg vcervsnpyf yddylqtmav ykgikegnga
      181 fiwehtqthp qaqgqsttfs lphdlynlns fkysveesdf lkvskvdved hknvgkhvdd
      241 hpnarrnagk ddevedkggg celslslslh hpssqseiss ssealslvsg snykdcsgss
      301 sctlrsinld lsialcgn
//
LOCUS       XP_040942197             780 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942197
VERSION     XP_040942197.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086263.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..780
                     /product="protein ACCUMULATION AND REPLICATION OF
                     CHLOROPLASTS 3 isoform X1"
                     /calculated_mol_wt=86411
     Region          <150..367
                     /region_name="Tubulin_FtsZ_Cetz-like"
                     /note="Tubulin protein family of FtsZ and CetZ-like;
                     cl10017"
                     /db_xref="CDD:471962"
     Region          <641..765
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     CDS             1..780
                     /gene="LOC107922665"
                     /coded_by="XM_041086263.1:99..2441"
                     /db_xref="GeneID:107922665"
ORIGIN      
        1 mpassmefpv ltgshvvsri slltrfssks vffnsffgpk slcckrlcyn ptsvvkisms
       61 mekqssslng ygqnmernsg vleviaigsr kdallefcld spfqssslrf wnvlmkdssn
      121 vqlqqrflgk dltpriveaa ifmqscpkti ilvagagygs dhiavmeilk tirasngfsv
      181 aiilkpftfe gqrrldevkd lagklqeltn fcieidtdsl lknelvtlde alktannavf
      241 lainaisvvi sevqiklida vhdnmkelgv sevinilgky keaklgfgag ynirtsilqa
      301 mydcpfigag vkdldgmvic vvassnvinn ndvqaflhtf rqtteytndi iisvvhepkl
      361 epnllvttvv ilghleeqas kkssiftrla qhfpfvfnll rrhpsqsndt ndvkvmnrtd
      421 sdemgkeval eglsggfddr hgeiqdtlnd kssdiyslrn ydsgsdqnei alldgktdfs
      481 syydditegi ptfsreplsr wnlgpgnqla kewakeraad seampvldnl sifclpvgvr
      541 sseepeegis tlnamefses ksenvvkapa lpsssrslga fsdasfeamk efynsgstll
      601 kgktgvpkkq gvlsaraasm leaerespkk wspivemhyr ggvyrgrcqg glpegkgrli
      661 lgdgniydgm wrygkrsgvg tfyfsngdvf qgswrddlmh gkgwfyfhtg drwfanfwkg
      721 kangegrfys ksgdvffghf edgwrhghfl citvdgtrci eiwnegvlms rqqldadavl
//
LOCUS       XP_040942198             615 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942198
VERSION     XP_040942198.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086264.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..615
                     /product="protein ACCUMULATION AND REPLICATION OF
                     CHLOROPLASTS 3 isoform X2"
                     /calculated_mol_wt=68253
     Region          <3..202
                     /region_name="Tubulin_FtsZ_Cetz-like"
                     /note="Tubulin protein family of FtsZ and CetZ-like;
                     cl10017"
                     /db_xref="CDD:471962"
     Region          <476..600
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     CDS             1..615
                     /gene="LOC107922665"
                     /coded_by="XM_041086264.1:169..2016"
                     /db_xref="GeneID:107922665"
ORIGIN      
        1 meilktiras ngfsvaiilk pftfegqrrl devkdlagkl qeltnfciei dtdsllknel
       61 vtldealkta nnavflaina isvvisevqi klidavhdnm kelgvsevin ilgkykeakl
      121 gfgagynirt silqamydcp figagvkdld gmvicvvass nvinnndvqa flhtfrqtte
      181 ytndiiisvv hepklepnll vttvvilghl eeqaskkssi ftrlaqhfpf vfnllrrhps
      241 qsndtndvkv mnrtdsdemg kevaleglsg gfddrhgeiq dtlndkssdi yslrnydsgs
      301 dqneialldg ktdfssyydd itegiptfsr eplsrwnlgp gnqlakewak eraadseamp
      361 vldnlsifcl pvgvrsseep eegistlnam efsesksenv vkapalpsss rslgafsdas
      421 feamkefyns gstllkgktg vpkkqgvlsa raasmleaer espkkwspiv emhyrggvyr
      481 grcqgglpeg kgrlilgdgn iydgmwrygk rsgvgtfyfs ngdvfqgswr ddlmhgkgwf
      541 yfhtgdrwfa nfwkgkange grfysksgdv ffghfedgwr hghflcitvd gtrcieiwne
      601 gvlmsrqqld adavl
//
LOCUS       XP_016708102             566 aa            linear   PLN 06-AUG-2024
DEFINITION  protein indeterminate-domain 5, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016708102
VERSION     XP_016708102.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852613.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708102.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="protein indeterminate-domain 5, chloroplastic"
                     /calculated_mol_wt=61248
     Region          69..89
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(74,76,78,80..81,84..85,88,122,124,128..129,132..133,
                     137,150,152,154,156..157,160..161,164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          110..138
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          145..164
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          172..188
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..566
                     /gene="LOC107922534"
                     /coded_by="XM_016852613.2:760..2460"
                     /db_xref="GeneID:107922534"
ORIGIN      
        1 maassslgpf gireedqhqh staaptsamg pappppqrkk rnqpvlpnpd vevialspks
       61 lmatnrfice vcnkgfqreq nlqlhrrghn lpwklrqktt kevkrkvylc peptcvhhdp
      121 sralgdltgi kkhysrkhge kkwkcekcsk ryavqsdwka hsktcgtrey rcdcgtlfsr
      181 rdsfithraf cdalaqenar qppsfnsign hlygstsnms lglsqvgtqm ssvqdqtsnn
      241 sggrdifklg gvarstqfdh lllspsmgss sssfrpqqsm vssaaffmpe snqehhpqqg
      301 ilgnnkqyhq glmmqfpadi qnnttntpsp psffnlsfls ncgngtnpda nltssglltp
      361 ehfdnetggg gggtseasdp fsntvmgnqi ttnipsvfaq snniavqmsa tallqkaaqm
      421 gstssyknas lmrsfgnsnf ggtlgdstgn nlhelmnsia gggsntfsfg hgqenpyanr
      481 ssveqekhve qqpqilnvsg gggsdrltrd flgvgqivrs msmggvsqre qqqqqqamgl
      541 salgsersni taptnhqclg gngnfq
//
LOCUS       XP_016734117             186 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016734117
VERSION     XP_016734117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..186
                     /product="kinesin-like protein KIN-12E isoform X1"
                     /calculated_mol_wt=20167
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>98
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..186
                     /gene="LOC107944803"
                     /coded_by="XM_016878628.2:383..943"
                     /db_xref="GeneID:107944803"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqlvkfikn navvnkdasg
       61 dvvamrlqiq qlkkevshlr afvngksenl dndnlassip aspgpfkwec ppgsfsplss
      121 dktmsqkkdy evalvgafkr erekeaalqa ltaenqaamq lmvwgrlsge pqrvllttnv
      181 gimllv
//
LOCUS       XP_040942199             180 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942199
VERSION     XP_040942199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086265.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="kinesin-like protein KIN-12E isoform X2"
                     /calculated_mol_wt=19368
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>98
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..180
                     /gene="LOC107944803"
                     /coded_by="XM_041086265.1:383..925"
                     /db_xref="GeneID:107944803"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqlvkfikn navvnkdasg
       61 dvvamrlqiq qlkkevshlr afvngksenl dndnlassip aspgpfkwec ppgsfsplss
      121 dktmsqkkdy evalvgafkr erekeaalqa ltaenqaamq lsvvffalyg dgaanqravv
//
LOCUS       XP_016706699             307 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor ASR3 [Gossypium hirsutum].
ACCESSION   XP_016706699
VERSION     XP_016706699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..307
                     /product="trihelix transcription factor ASR3"
                     /calculated_mol_wt=35256
     Region          46..118
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..307
                     /gene="LOC107921337"
                     /coded_by="XM_016851210.2:92..1015"
                     /db_xref="GeneID:107921337"
ORIGIN      
        1 msnplppppp psthhhqhqp lniitpatts attmtsapnr eyrkgnwtiq etltlitakr
       61 ldderrakps tsspskpgel rwkwienycw dhgcfrsqnq cndkwdnllr dykkvrqyqs
      121 shsqsqsshp flsywsmerh qrklhnlptn mspevfealn dvlqrklntq qqphlhqpsf
      181 sqspeqlplk tdqnppevda pvtvseesds setessenld sktkrkkvrk igssimrsas
      241 vlaqtlksce enkekrhqqv melehrrlqi eetrnevnrk gitdlvaamt nlsgaiqsli
      301 anhydqt
//
LOCUS       XP_016707172             322 aa            linear   PLN 06-AUG-2024
DEFINITION  lignin-forming anionic peroxidase [Gossypium hirsutum].
ACCESSION   XP_016707172
VERSION     XP_016707172.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851683.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..322
                     /product="lignin-forming anionic peroxidase"
                     /calculated_mol_wt=34564
     Region          26..321
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(56,59..60,62..63,66..67,98,100,164..167,173,177,187,
                     190..191,193..194,196..200,202..203,241,264,266,298)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(56,59..60,62..63,66,95,98,100,164..166,173,177,187,
                     190..191,193..194,196..200,203,241,264,266,298)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(63,93..94,164..167,200,202..203)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(68,71,75,77,195,242,245,248,250)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..322
                     /gene="LOC107921848"
                     /coded_by="XM_016851683.2:90..1058"
                     /db_xref="GeneID:107921848"
ORIGIN      
        1 mvtaaifraa atvmllvlsf sacqaqlsst fygdtcpnal gtirtsirsa iarerrmaas
       61 lirlhfhdcf vqgcdasill dnspsitsek fvtqnnnsvr gfevideaks avenvcpgvv
      121 scadilavaa rdaseyvggp swtvklgrkd sttasaslas rdlprfadgl qrlidlfesk
      181 glserdmval sgshtigqaq cvtfrdriys ngsdidagfa strrrncpat fpngngnlap
      241 ldlvtpnsfd nnyfrnllqk kgllqsdqvl fsggstdsiv ndysrnpstf rsdfasamik
      301 mgdiepltgs agiirricsr vn
//
LOCUS       XP_040942200             112 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942200
VERSION     XP_040942200.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086266.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12218
     CDS             1..112
                     /gene="LOC107921602"
                     /coded_by="XM_041086266.1:16..354"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggiwskfvvk lk
//
LOCUS       XP_040942201             112 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942201
VERSION     XP_040942201.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086267.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12218
     CDS             1..112
                     /gene="LOC107921602"
                     /coded_by="XM_041086267.1:16..354"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggiwskfvvk lk
//
LOCUS       XP_016706921             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706921
VERSION     XP_016706921.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851432.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11919
     CDS             1..110
                     /gene="LOC107921602"
                     /coded_by="XM_016851432.2:16..348"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggkefgqnll
//
LOCUS       XP_040942202             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942202
VERSION     XP_040942202.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086268.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11919
     CDS             1..110
                     /gene="LOC107921602"
                     /coded_by="XM_041086268.1:16..348"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggkefgqnll
//
LOCUS       XP_040942203             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942203
VERSION     XP_040942203.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086269.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11919
     CDS             1..110
                     /gene="LOC107921602"
                     /coded_by="XM_041086269.1:16..348"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggkefgqnll
//
LOCUS       XP_040942204             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942204
VERSION     XP_040942204.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086270.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11779
     CDS             1..110
                     /gene="LOC107921602"
                     /coded_by="XM_041086270.1:16..348"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggkndtsstg
//
LOCUS       XP_040942205             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942205
VERSION     XP_040942205.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086271.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11779
     CDS             1..110
                     /gene="LOC107921602"
                     /coded_by="XM_041086271.1:16..348"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggkndtsstg
//
LOCUS       XP_040942206             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942206
VERSION     XP_040942206.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086272.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11779
     CDS             1..110
                     /gene="LOC107921602"
                     /coded_by="XM_041086272.1:16..348"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ggkndtsstg
//
LOCUS       XP_040942207             102 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942207
VERSION     XP_040942207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086273.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..102
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=11061
     CDS             1..102
                     /gene="LOC107921602"
                     /coded_by="XM_041086273.1:16..324"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ge
//
LOCUS       XP_040942208             102 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942208
VERSION     XP_040942208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086274.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..102
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=11061
     CDS             1..102
                     /gene="LOC107921602"
                     /coded_by="XM_041086274.1:16..324"
                     /db_xref="GeneID:107921602"
ORIGIN      
        1 mpyygliplr ayakklsyfy sissapitds vfketlntkt lptlpspllp lshlkkadgq
       61 sfiagsackq gkngertskt gsadelnkgy fddmselkqh ge
//
LOCUS       XP_040942209            1273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942209
VERSION     XP_040942209.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086275.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1273
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=144472
     Region          65..194
                     /region_name="DUF6469"
                     /note="Domain of unknown function (DUF6469); pfam20073"
                     /db_xref="CDD:437905"
     Region          <227..823
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
     Region          619..816
                     /region_name="AAA_12"
                     /note="AAA domain; pfam13087"
                     /db_xref="CDD:463780"
     CDS             1..1273
                     /gene="LOC107945915"
                     /coded_by="XM_041086275.1:53..3874"
                     /db_xref="GeneID:107945915"
ORIGIN      
        1 mgfidivfqw sledifndnl ykdqvemipv sfqsveqyfg syllplldet raalrssmev
       61 iarapyaevt ylneskshgt llldvnvdyw rnrfsdreke pyktlpgdvf vianvkpeta
      121 sdlqrvgrtw ifalvtniqe dddednssst sfkvkaledf vskdeaqksl fvvhltnltt
      181 ntriwsalhm ernlkiikev lhadsmvaes cslcssdigg nwneiflknl lsklnesqkk
      241 slvaclnkml cnhkshveli wgppgtgktk tvsvllfall rmkyrtlaca ptniaitevv
      301 arvlklvkea kkacsvaddq fcslgdillf gskerlkvds eieeifldyr vkrltecfgp
      361 lgwwhcftsm itfledcvpq yhiflenest kkqehvsede nqekgccset ddkkgihksf
      421 leyarerfat talplrrcvs ilhthipkiy fqahnfkdle tlsgllnsle tclffdglas
      481 eeveelllrs kddkllpqnl cdpsrllcsi rsqclsvlrr lrdslgqlkl psarnkdslv
      541 qfcfqtaslf fstacssykl yklemkplnv lvideaaqlk ecesvipmql pgivhsilig
      601 dewqlpasvq snvsneagfg rslfqrlttl ghskhllniq yrmhpsisff pnacfynkri
      661 ldaagvkhks yekhylpwpm fgpysfinvs greekddagr shrnmveval vqrlvqtlfk
      721 awnssrerls vgiispyaaq vvaiqeklgr kyektdgfav kvksvdgfqg geediiiist
      781 vrsnssgalg fvsnaqrtnv altrarhclw ilgdgrtlak hesvwqglvh dakmrhcffn
      841 adeekglaka ifdakkefdq lddllnhdsv lfknarwkvl fsdnfrksfg kmksaqtqks
      901 vlnlllklsc gwrpkkrnvd licesssmvl kqfkveglyi vcsidvvkeq rytqvlkawd
      961 llpledivrl vkrldgifkm ytddfichcn ekylegdlev pkswttsfdi vrfkalsqde
     1021 iknsscgssa sdnrcylens kvseslllmk fyslssgvvs hllfdhdgre pelpfevtdh
     1081 erdiilfprs tfilgrsgtg kttvltmklf kqeqlhllat egfdavntnr vsdvclanrn
     1141 mggvggteat llrqlfvtvs pklcyavknh vlqlkrfvsg gnfslegafq dvddndgaaq
     1201 fkdipdsfvd ilpkayplvi tlqkflimld gtignsffek fydarelsnm evvnaptlvr
     1261 ncirtkevty ekf
//
LOCUS       XP_040942210            1210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942210
VERSION     XP_040942210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086276.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1210
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=137652
     Region          65..194
                     /region_name="DUF6469"
                     /note="Domain of unknown function (DUF6469); pfam20073"
                     /db_xref="CDD:437905"
     Region          <227..823
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
     Region          619..816
                     /region_name="AAA_12"
                     /note="AAA domain; pfam13087"
                     /db_xref="CDD:463780"
     CDS             1..1210
                     /gene="LOC107945915"
                     /coded_by="XM_041086276.1:53..3685"
                     /db_xref="GeneID:107945915"
ORIGIN      
        1 mgfidivfqw sledifndnl ykdqvemipv sfqsveqyfg syllplldet raalrssmev
       61 iarapyaevt ylneskshgt llldvnvdyw rnrfsdreke pyktlpgdvf vianvkpeta
      121 sdlqrvgrtw ifalvtniqe dddednssst sfkvkaledf vskdeaqksl fvvhltnltt
      181 ntriwsalhm ernlkiikev lhadsmvaes cslcssdigg nwneiflknl lsklnesqkk
      241 slvaclnkml cnhkshveli wgppgtgktk tvsvllfall rmkyrtlaca ptniaitevv
      301 arvlklvkea kkacsvaddq fcslgdillf gskerlkvds eieeifldyr vkrltecfgp
      361 lgwwhcftsm itfledcvpq yhiflenest kkqehvsede nqekgccset ddkkgihksf
      421 leyarerfat talplrrcvs ilhthipkiy fqahnfkdle tlsgllnsle tclffdglas
      481 eeveelllrs kddkllpqnl cdpsrllcsi rsqclsvlrr lrdslgqlkl psarnkdslv
      541 qfcfqtaslf fstacssykl yklemkplnv lvideaaqlk ecesvipmql pgivhsilig
      601 dewqlpasvq snvsneagfg rslfqrlttl ghskhllniq yrmhpsisff pnacfynkri
      661 ldaagvkhks yekhylpwpm fgpysfinvs greekddagr shrnmveval vqrlvqtlfk
      721 awnssrerls vgiispyaaq vvaiqeklgr kyektdgfav kvksvdgfqg geediiiist
      781 vrsnssgalg fvsnaqrtnv altrarhclw ilgdgrtlak hesvwqglvh dakmrhcffn
      841 adeekglaka ifdakkefdq lddllnhdsv lfknarwkvl fsdnfrksfg kmksaqtqks
      901 vlnlllklsc gwrpkkrnvd licesssmvl kqfkveglyi vcsidvvkeq rytqvlkawd
      961 llpledivrl vkrldgifkm ytddfichcn ekylegdlev pkswttsfdi vrfkalsqde
     1021 iknsscgssa sdnrcylens kvseslllmk fyslssgvvs hllfdhdgre pelpfevtdh
     1081 erdiilfprs tfilgrsgtg kttvltmklf kqeqlhllat egfdavntnr vsdvclanrn
     1141 mggvggteat llrqlfvtvs pklcyavknh vlqlksfriy egllttfnef cfpmvcqrwk
     1201 lfsrgcfsrc
//
LOCUS       XP_016735565             322 aa            linear   PLN 06-AUG-2024
DEFINITION  lignin-forming anionic peroxidase [Gossypium hirsutum].
ACCESSION   XP_016735565
VERSION     XP_016735565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016880076.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..322
                     /product="lignin-forming anionic peroxidase"
                     /calculated_mol_wt=34564
     Region          26..321
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(56,59..60,62..63,66..67,98,100,164..167,173,177,187,
                     190..191,193..194,196..200,202..203,241,264,266,298)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(56,59..60,62..63,66,95,98,100,164..166,173,177,187,
                     190..191,193..194,196..200,203,241,264,266,298)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(63,93..94,164..167,200,202..203)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(68,71,75,77,195,242,245,248,250)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..322
                     /gene="LOC107945916"
                     /coded_by="XM_016880076.2:90..1058"
                     /db_xref="GeneID:107945916"
ORIGIN      
        1 mvtaaifraa atvmllvlsf sacqaqlsst fygdtcpnal gtirtsirsa iarerrmaas
       61 lirlhfhdcf vqgcdasill dnspsitsek fvtqnnnsvr gfevideaks avenvcpgvv
      121 scadilavaa rdaseyvggp swtvklgrkd sttasaslas rdlprfadgl qrlidlfesk
      181 glserdmval sgshtigqaq cvtfrdriys ngsdidagfa strrrncpat fpngngnlap
      241 ldlvtpnsfd nnyfrnllqk kgllqsdqvl fsggstdsiv ndysrnpstf rsdfasamik
      301 mgdiepltgs agiirricsr vn
//
LOCUS       XP_016735566             330 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SLOW GREEN 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016735566
VERSION     XP_016735566.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016880077.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016735566.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..330
                     /product="protein SLOW GREEN 1, chloroplastic"
                     /calculated_mol_wt=36804
     Region          129..>310
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          165..195
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          200..228
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          234..268
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          273..303
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..330
                     /gene="LOC107945917"
                     /coded_by="XM_016880077.2:101..1093"
                     /db_xref="GeneID:107945917"
ORIGIN      
        1 mnptlatlss pslsflplkp lsspsfltfp spkplrlrvs sanfdaipvs kpnnngqsls
       61 qklqsfakta vlvgatslmi gkfsnfpaka dslpamteqe pavlqeneqv ktqspketsp
      121 lseflgsnde aiaalqsllq qklengedee alsilnrlvs aqpdfidwkf llgrllgemg
      181 qtenarkvfe eilqsnpfsf ealfenallm drcgegeavi krleealara qeekkvkear
      241 dvrfimaqiq flqknvdesl msyqelaked ptdfrpyfcq giiyslldrn aeakeqfaky
      301 kelspkkfev dgylrtslsr mklfgtseen
//
LOCUS       XP_016697533             448 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g02148 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016697533
VERSION     XP_016697533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..448
                     /product="uncharacterized protein At2g02148 isoform X1"
                     /calculated_mol_wt=50140
     Region          <321..391
                     /region_name="KLF1_2_4_N"
                     /note="N-terminal domain of Kruppel-like factor (KLF) 1,
                     KLF2, KLF4, and similar proteins; cl41729"
                     /db_xref="CDD:425360"
     Region          414..>440
                     /region_name="YacG"
                     /note="DNA gyrase inhibitor YacG; cl01144"
                     /db_xref="CDD:470095"
     CDS             1..448
                     /gene="LOC107913459"
                     /coded_by="XM_016842044.2:195..1541"
                     /db_xref="GeneID:107913459"
ORIGIN      
        1 mgsrlpvqhy snsfiptslh dlntvdsrps eidavdatda ldhhdhdhpd sttveclhes
       61 yrnslpihgv gaeeedrssl dngdssrgaf siltiedvsp iesararflq iivdnfikdh
      121 vievvdnesp veynaqsgqe klnkrktgdi qyegdprfal plmyvanlye tlvndvnlri
      181 aslngirdkt igvaleaagg lyrrlakkfp kkgsymykrr elatshetrt rfpelviqee
      241 krvrfvvvng ldiverpnnv pvedaewfkr ltgrnevais aqdykfyspr hkyrrvtsnt
      301 vsnipalpaf sgsdssplsn aqgfhtvnet qeqtpskhhi ptmshqpqfh pihqnhhqpv
      361 hpnqhgahfp qnhqcgppsh lpeishahqs ptmsqhiacl qpltgghvga rlhvmptnpa
      421 kycdecgapy lretskfcse cgikrlgi
//
LOCUS       XP_016697534             414 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g02148 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016697534
VERSION     XP_016697534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..414
                     /product="uncharacterized protein At2g02148 isoform X2"
                     /calculated_mol_wt=46443
     Region          <287..357
                     /region_name="KLF1_2_4_N"
                     /note="N-terminal domain of Kruppel-like factor (KLF) 1,
                     KLF2, KLF4, and similar proteins; cl41729"
                     /db_xref="CDD:425360"
     Region          380..>406
                     /region_name="YacG"
                     /note="DNA gyrase inhibitor YacG; cl01144"
                     /db_xref="CDD:470095"
     CDS             1..414
                     /gene="LOC107913459"
                     /coded_by="XM_016842045.2:288..1532"
                     /db_xref="GeneID:107913459"
ORIGIN      
        1 mplmlwitti ttipipllls eclhesyrns lpihgvgaee edrssldngd ssrgafsilt
       61 iedvspiesa rarflqiivd nfikdhviev vdnespveyn aqsgqeklnk rktgdiqyeg
      121 dprfalplmy vanlyetlvn dvnlriasln girdktigva leaagglyrr lakkfpkkgs
      181 ymykrrelat shetrtrfpe lviqeekrvr fvvvngldiv erpnnvpved aewfkrltgr
      241 nevaisaqdy kfysprhkyr rvtsntvsni palpafsgsd ssplsnaqgf htvnetqeqt
      301 pskhhiptms hqpqfhpihq nhhqpvhpnq hgahfpqnhq cgppshlpei shahqsptms
      361 qhiaclqplt gghvgarlhv mptnpakycd ecgapylret skfcsecgik rlgi
//
LOCUS       XP_016697535             414 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g02148 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016697535
VERSION     XP_016697535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..414
                     /product="uncharacterized protein At2g02148 isoform X2"
                     /calculated_mol_wt=46443
     Region          <287..357
                     /region_name="KLF1_2_4_N"
                     /note="N-terminal domain of Kruppel-like factor (KLF) 1,
                     KLF2, KLF4, and similar proteins; cl41729"
                     /db_xref="CDD:425360"
     Region          380..>406
                     /region_name="YacG"
                     /note="DNA gyrase inhibitor YacG; cl01144"
                     /db_xref="CDD:470095"
     CDS             1..414
                     /gene="LOC107913459"
                     /coded_by="XM_016842046.2:301..1545"
                     /db_xref="GeneID:107913459"
ORIGIN      
        1 mplmlwitti ttipipllls eclhesyrns lpihgvgaee edrssldngd ssrgafsilt
       61 iedvspiesa rarflqiivd nfikdhviev vdnespveyn aqsgqeklnk rktgdiqyeg
      121 dprfalplmy vanlyetlvn dvnlriasln girdktigva leaagglyrr lakkfpkkgs
      181 ymykrrelat shetrtrfpe lviqeekrvr fvvvngldiv erpnnvpved aewfkrltgr
      241 nevaisaqdy kfysprhkyr rvtsntvsni palpafsgsd ssplsnaqgf htvnetqeqt
      301 pskhhiptms hqpqfhpihq nhhqpvhpnq hgahfpqnhq cgppshlpei shahqsptms
      361 qhiaclqplt gghvgarlhv mptnpakycd ecgapylret skfcsecgik rlgi
//
LOCUS       XP_016707373             742 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 17 [Gossypium hirsutum].
ACCESSION   XP_016707373
VERSION     XP_016707373.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851884.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..742
                     /product="zinc finger CCCH domain-containing protein 17"
                     /calculated_mol_wt=81690
     Region          39..>96
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          <101..>168
                     /region_name="YTH1"
                     /note="Cleavage and polyadenylation specificity factor
                     (CPSF) Clipper subunit and related makorin family
                     Zn-finger proteins [General function prediction only];
                     COG5084"
                     /db_xref="CDD:227416"
     Region          143..161
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          <489..717
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..742
                     /gene="LOC107922054"
                     /coded_by="XM_016851884.2:371..2599"
                     /db_xref="GeneID:107922054"
ORIGIN      
        1 mvaatpqqqq qqqkqaavat ttvtvagatk psaeeealkr ntdcvyflas pltckkgsec
       61 eyrhseyarv nprdcyywln gnclnpkcgf rhppldgllg tqatiptgss kpsshtaatt
      121 apashmpynq gasyssskqa vpcifflkgl cikgdrcafl hgpttsnkat qpaatttase
      181 phslkktfga veasqsqkfp ptnvsntvgl apeskpsakv kaaftrsgtg teksvpspvg
      241 ldeelprhka tkttsvvngg smghsgwlhq phasdeqtfh glkdteeflr esspgfdvlv
      301 ddelrdsdfy hgedqyggtr ghegrnvney digrpanfda mvdvdqemfh dargydsfdn
      361 vqgnydwdqq rasseriplg sstlerrgys rvdspdhvee sdlrhrlskr rrvnglksvv
      421 shdnavenye gernyragsh rdshrlppne rslgsrlqgr iklpgrsvng sdlhsereie
      481 rgrnwgrhsp gkpqtssqgr lrdrikgkve gdfnnnegrn fggprirrei tdernadfag
      541 pkslaelkvg knsdnkqhqs lgkrrsvgdh qqiegdlsfk gpmplseilk rkrqsegats
      601 gdgiasvnke dvdqkqskgs lisgsnnkev svtvkeankd eeskvaatdi giteathges
      661 sqplnmsehe adadaedgii gderiedhev eaddqrdgey yyeqvdegey nyeedenvdp
      721 eeeyieeedg ddfakklgvm fs
//
LOCUS       XP_016707727             886 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing protein 40C isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707727
VERSION     XP_016707727.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707727.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..886
                     /product="pre-mRNA-processing protein 40C isoform X1"
                     /calculated_mol_wt=97784
     Region          <3..225
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          258..>653
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     Region          722..774
                     /region_name="FF"
                     /note="FF domain; pfam01846"
                     /db_xref="CDD:426471"
     CDS             1..886
                     /gene="LOC107922278"
                     /coded_by="XM_016852238.2:359..3019"
                     /db_xref="GeneID:107922278"
ORIGIN      
        1 mqpplpvpqg alsssasfsf tpnpqlvqna qiqpsksdml atgtqamaas spstvsqsgp
       61 lpvhnsseft mnasttpsfa pvtsrmpttp pfpmssgssg tsgtlghpvs vpsiqmitas
      121 aavdspssav pgpgapvsln pavqqqvypp ytslpsmvss pqgywmqhpp mggfprppfv
      181 pyptvypgpf pstssgmplp apssdsqppg frplgmspfa psaaalanqs lailtgfppq
      241 gidnrklvhd vttkvesagn eqsdvwtahk tdtgvvyyyn altgestyek pagfkgepdq
      301 vtvqptpvsv eqlagtdwal vttndgkkyy ynsktkissw qipnevtelr kkqdsevske
      361 navsvpnidv vaekgstpis lsapavntgg rdamplrtsv vpgsssaldl ikkklqdpgv
      421 pssspvpvmp vtathelngl ravdvkglqs esnkdklkda ngdgsisdss sdsedadsgp
      481 skeecimqfk emlkergvap fskwekelpk ivfdprfkai pshsarrslf ehyvktraee
      541 erkekraaqk aaiegfkqll deasedidhd tnyqtfkrkw gsdprfeald rkdrelllne
      601 rvlllkraae ekarairaaa assfksmlke kgdinvnsrw srvkdslrdd prykcvkhed
      661 revlfneyis elkaieekae rkdkvkkeee eklkererel rkrkereeqe mervrlkvrr
      721 keavasfqal lvetikdpqa swteskpkle kdpqgraanp dldssdmekl frehikmlfe
      781 rcvndfrall akvitqdaaa qeteggktal nswstakrll kpdprynkmp rkerealwrr
      841 yaedmlrkqk saldqeeekh tdvkgrssgg dfgryssgtr rtherr
//
LOCUS       XP_016707728             885 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing protein 40C isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707728
VERSION     XP_016707728.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852239.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707728.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..885
                     /product="pre-mRNA-processing protein 40C isoform X2"
                     /calculated_mol_wt=97655
     Region          <3..225
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          258..>653
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     Region          721..773
                     /region_name="FF"
                     /note="FF domain; pfam01846"
                     /db_xref="CDD:426471"
     CDS             1..885
                     /gene="LOC107922278"
                     /coded_by="XM_016852239.2:361..3018"
                     /db_xref="GeneID:107922278"
ORIGIN      
        1 mqpplpvpqg alsssasfsf tpnpqlvqna qiqpsksdml atgtqamaas spstvsqsgp
       61 lpvhnsseft mnasttpsfa pvtsrmpttp pfpmssgssg tsgtlghpvs vpsiqmitas
      121 aavdspssav pgpgapvsln pavqqqvypp ytslpsmvss pqgywmqhpp mggfprppfv
      181 pyptvypgpf pstssgmplp apssdsqppg frplgmspfa psaaalanqs lailtgfppq
      241 gidnrklvhd vttkvesagn eqsdvwtahk tdtgvvyyyn altgestyek pagfkgepdq
      301 vtvqptpvsv eqlagtdwal vttndgkkyy ynsktkissw qipnevtelr kkqdsevske
      361 navsvpnidv vaekgstpis lsapavntgg rdamplrtsv vpgsssaldl ikkklqdpgv
      421 pssspvpvmp vtathelngl ravdvkglqs esnkdklkda ngdgsisdss sdsedadsgp
      481 skeecimqfk emlkergvap fskwekelpk ivfdprfkai pshsarrslf ehyvktraee
      541 erkekraaqk aaiegfkqll deasedidhd tnyqtfkrkw gsdprfeald rkdrelllne
      601 rvlllkraae ekarairaaa assfksmlke kgdinvnsrw srvkdslrdd prykcvkhed
      661 revlfneyis elkaieekae rkdkvkkeee klkererelr krkereeqem ervrlkvrrk
      721 eavasfqall vetikdpqas wteskpklek dpqgraanpd ldssdmeklf rehikmlfer
      781 cvndfralla kvitqdaaaq eteggktaln swstakrllk pdprynkmpr kerealwrry
      841 aedmlrkqks aldqeeekht dvkgrssggd fgryssgtrr therr
//
LOCUS       XP_040942211             848 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing protein 40C isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942211
VERSION     XP_040942211.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086277.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..848
                     /product="pre-mRNA-processing protein 40C isoform X3"
                     /calculated_mol_wt=93807
     Region          <3..187
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          220..>615
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     Region          684..736
                     /region_name="FF"
                     /note="FF domain; pfam01846"
                     /db_xref="CDD:426471"
     CDS             1..848
                     /gene="LOC107922278"
                     /coded_by="XM_041086277.1:136..2682"
                     /db_xref="GeneID:107922278"
ORIGIN      
        1 mlatgtqama asspstvsqs gplpvhnsse ftmnasttps fapvtsrmpt tppfpmssgs
       61 sgtsgtlghp vsvpsiqmit asaavdspss avpgpgapvs lnpavqqqvy ppytslpsmv
      121 sspqgywmqh ppmggfprpp fvpyptvypg pfpstssgmp lpapssdsqp pgfrplgmsp
      181 fapsaaalan qslailtgfp pqgidnrklv hdvttkvesa gneqsdvwta hktdtgvvyy
      241 ynaltgesty ekpagfkgep dqvtvqptpv sveqlagtdw alvttndgkk yyynsktkis
      301 swqipnevte lrkkqdsevs kenavsvpni dvvaekgstp islsapavnt ggrdamplrt
      361 svvpgsssal dlikkklqdp gvpssspvpv mpvtatheln glravdvkgl qsesnkdklk
      421 dangdgsisd sssdsedads gpskeecimq fkemlkergv apfskwekel pkivfdprfk
      481 aipshsarrs lfehyvktra eeerkekraa qkaaiegfkq lldeasedid hdtnyqtfkr
      541 kwgsdprfea ldrkdrelll nervlllkra aeekaraira aaassfksml kekgdinvns
      601 rwsrvkdslr ddprykcvkh edrevlfney iselkaieek aerkdkvkke eeeklkerer
      661 elrkrkeree qemervrlkv rrkeavasfq allvetikdp qaswteskpk lekdpqgraa
      721 npdldssdme klfrehikml fercvndfra llakvitqda aaqeteggkt alnswstakr
      781 llkpdprynk mprkerealw rryaedmlrk qksaldqeee khtdvkgrss ggdfgryssg
      841 trrtherr
//
LOCUS       XP_016706920             518 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706920
VERSION     XP_016706920.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851431.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706920.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57525
     Region          295..329
                     /region_name="DUF963"
                     /note="Schizosaccharomyces pombe repeat of unknown
                     function (DUF963); pfam06131"
                     /db_xref="CDD:283731"
     Region          422..509
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..518
                     /gene="LOC107921600"
                     /coded_by="XM_016851431.2:222..1778"
                     /db_xref="GeneID:107921600"
ORIGIN      
        1 mdyeriqkpq ggggfspakl rtmllgvekk rkqeeeqves svdlrselsh ldddsgksgs
       61 dsckdvdvvs vlpecststt asstaamqng nerrskdhsl gtaqnrfied hpgldydsgh
      121 dnmsvsssif efqkterapq rvplgpfskp apskwddaqk wiasptanrp ktgqggqgvg
      181 srkggnfgyg rqsstkvvie vpdqrmvafe epdtkridtn hakkddglqk fvnwesdpyp
      241 vvdsygkpvl mignsvaesa islsqhdssi sihsattfip ppstarsvsm rdmgtemtpi
      301 asqepsrngt pvrsttpirs pnssrpstpt ravpstspen srrdhldlnr dlsekelqmk
      361 trreimvlga qlgktniaaw askeeedkda stslkivape qpsksvietr aaaweeaeka
      421 kymarfkree mkiqawenhq kakteaemrk ievevermrg rahdklmnkl aaarhkaeek
      481 raeaeakrnr qaaeteqqad yirrtgrvpy fccwswcs
//
LOCUS       XP_040942212             518 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942212
VERSION     XP_040942212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086278.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57525
     Region          295..329
                     /region_name="DUF963"
                     /note="Schizosaccharomyces pombe repeat of unknown
                     function (DUF963); pfam06131"
                     /db_xref="CDD:283731"
     Region          422..509
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..518
                     /gene="LOC107921600"
                     /coded_by="XM_041086278.1:257..1813"
                     /db_xref="GeneID:107921600"
ORIGIN      
        1 mdyeriqkpq ggggfspakl rtmllgvekk rkqeeeqves svdlrselsh ldddsgksgs
       61 dsckdvdvvs vlpecststt asstaamqng nerrskdhsl gtaqnrfied hpgldydsgh
      121 dnmsvsssif efqkterapq rvplgpfskp apskwddaqk wiasptanrp ktgqggqgvg
      181 srkggnfgyg rqsstkvvie vpdqrmvafe epdtkridtn hakkddglqk fvnwesdpyp
      241 vvdsygkpvl mignsvaesa islsqhdssi sihsattfip ppstarsvsm rdmgtemtpi
      301 asqepsrngt pvrsttpirs pnssrpstpt ravpstspen srrdhldlnr dlsekelqmk
      361 trreimvlga qlgktniaaw askeeedkda stslkivape qpsksvietr aaaweeaeka
      421 kymarfkree mkiqawenhq kakteaemrk ievevermrg rahdklmnkl aaarhkaeek
      481 raeaeakrnr qaaeteqqad yirrtgrvpy fccwswcs
//
LOCUS       XP_040942213             518 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942213
VERSION     XP_040942213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086279.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57525
     Region          295..329
                     /region_name="DUF963"
                     /note="Schizosaccharomyces pombe repeat of unknown
                     function (DUF963); pfam06131"
                     /db_xref="CDD:283731"
     Region          422..509
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..518
                     /gene="LOC107921600"
                     /coded_by="XM_041086279.1:251..1807"
                     /db_xref="GeneID:107921600"
ORIGIN      
        1 mdyeriqkpq ggggfspakl rtmllgvekk rkqeeeqves svdlrselsh ldddsgksgs
       61 dsckdvdvvs vlpecststt asstaamqng nerrskdhsl gtaqnrfied hpgldydsgh
      121 dnmsvsssif efqkterapq rvplgpfskp apskwddaqk wiasptanrp ktgqggqgvg
      181 srkggnfgyg rqsstkvvie vpdqrmvafe epdtkridtn hakkddglqk fvnwesdpyp
      241 vvdsygkpvl mignsvaesa islsqhdssi sihsattfip ppstarsvsm rdmgtemtpi
      301 asqepsrngt pvrsttpirs pnssrpstpt ravpstspen srrdhldlnr dlsekelqmk
      361 trreimvlga qlgktniaaw askeeedkda stslkivape qpsksvietr aaaweeaeka
      421 kymarfkree mkiqawenhq kakteaemrk ievevermrg rahdklmnkl aaarhkaeek
      481 raeaeakrnr qaaeteqqad yirrtgrvpy fccwswcs
//
LOCUS       XP_016707444             230 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707444
VERSION     XP_016707444.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707444.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25571
     Region          125..217
                     /region_name="DUF3067"
                     /note="Domain of unknown function (DUF3067); pfam11267"
                     /db_xref="CDD:431770"
     CDS             1..230
                     /gene="LOC107922107"
                     /coded_by="XM_016851955.2:405..1097"
                     /db_xref="GeneID:107922107"
ORIGIN      
        1 mtsfiltncc nwsvgvlehv cssrgrfhkp prlrccgpyf hlggfsfsqg qgqyfaatss
       61 qsrgrsgpif ssavddggad sgdaedgngq kessqsenqg tnsdilrenl erivgtddst
      121 fsgldlatli rnkygrsydv qlikkefmgr nllalnvmwk ymeqrsfplt eeeyllrldd
      181 vantlkcwga vshirnslak lkerprigka vsifidmdet ggranewiyk
//
LOCUS       XP_016707758             576 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707758
VERSION     XP_016707758.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852269.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707758.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..576
                     /product="uncharacterized protein"
                     /calculated_mol_wt=61770
     Region          <170..355
                     /region_name="PcbC"
                     /note="Isopenicillin N synthase and related dioxygenases
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG3491"
                     /db_xref="CDD:442714"
     CDS             1..576
                     /gene="LOC107922296"
                     /coded_by="XM_016852269.2:167..1897"
                     /db_xref="GeneID:107922296"
ORIGIN      
        1 mvammmqqpq qatppnpppp sdsslrsptp tptqsplplp lrprqplehv avpisaahps
       61 geplvtmgaa alplarvrls dispydgaps asyvraveaf sgslmrhnaa viefgnedaa
      121 lmrcaleaar lyfrsrvntv gkgsrgfymy ragrsledwd ssppcmadif rcmgkaarva
      181 lcaiarhlrl qsdvfnhlld dtplpanevs ssvlvasysh mslqngkgai gggkpgtage
      241 vekglltlis sdgpglqvcd pngrwyqada glapgdmlli tgkalshata glrpaatyra
      301 apeylsginn ggrtslafrl mpqgnaildc spvaaaghvi pqsyvpisvs qfmdelsaee
      361 dvvcnrsdnt cvarnnlnkq pslrsvlsdp lsgafledav vvscghsfgg lmlkrvldms
      421 rctlcsadid sgslipnkal raaalavkqe dnrrlfhnaa lrkrrkemgd qidlskrssr
      481 engedgaedg lhrgvqypfs vnekvlikgn rrtpekfvgk eavitsqcln gwyllkiigs
      541 genvrlqyrs lckimnpqst ieedrcpsqp iqnsss
//
LOCUS       XP_016706690             535 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At3g19850 [Gossypium hirsutum].
ACCESSION   XP_016706690
VERSION     XP_016706690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..535
                     /product="BTB/POZ domain-containing protein At3g19850"
                     /calculated_mol_wt=60492
     Region          7..104
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          198..425
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..535
                     /gene="LOC107921327"
                     /coded_by="XM_016851201.2:385..1992"
                     /db_xref="GeneID:107921327"
ORIGIN      
        1 mpqfinlqii indqhafflh eniisafsgr lkkiirkqkr ktqienyvie lndfpggpdg
       61 feqvarfcys yggveitvsn vplfyccaff lgmtektstn nllrqtdkfl egmfdwswtd
      121 limslrscep ffsyadsygl iqkfifalla kiaqnsdmnf itsssssssp etsfgfrfss
      181 tskaspesas pctksgkdww fddltilspk iiekiirnlg aygnqnnsft ltrfllhylk
      241 srpqgsptsk seyggladta vhgvilvgkt kfscrklfwv lrlvsgfsls kdyraglerl
      301 igenldeatv ddllvsghnk gvydvnlvir litvfvnseg vnsekmkklg rlidkylrei
      361 spdqnlntsk flavaeslph sardcfdgvy raidfylqsh ptlsfedrsr lcrclsyekl
      421 tfeaskelak nprippnisv qalisqqskv pqnelmlygs npkgsrvlyh dsidsssaen
      481 fsegteymkl nlqkmqwrvv elekackemk gqmsklvrhn saitpcynat lprfc
//
LOCUS       XP_016708141             388 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 15 [Gossypium
            hirsutum].
ACCESSION   XP_016708141
VERSION     XP_016708141.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852652.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708141.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..388
                     /product="transcription initiation factor TFIID subunit
                     15"
                     /calculated_mol_wt=42787
     Region          15..97
                     /region_name="RRM_SARFH"
                     /note="RNA recognition motif (RRM) found in Drosophila
                     melanogaster RNA-binding protein cabeza and similar
                     proteins; cd12534"
                     /db_xref="CDD:240978"
     Region          148..173
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          150..171
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          215..238
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          217..236
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..388
                     /gene="LOC107922565"
                     /coded_by="XM_016852652.2:271..1437"
                     /db_xref="GeneID:107922565"
ORIGIN      
        1 masnsgrgyp tngsiyvcnl pegtdesmla eyfgtigllk kdkrtgrpki wlyrdkvtne
       61 pkgdatvtye dphaalaave wfndkdfhgs tigvfmaesk ssnavvdvpt aaaddggfed
      121 daakdmdggg grgrgrvdas gktwqqegdw lcpntscsnv nfsfrgvcnr cgtarpagas
      181 gggggaggrg kgrgapdsgg hgravaatgg lfgpndwpcp mcgninwakr mkcnicntnk
      241 pghneggvrg graggykeld eeeieetrrr rreaeddgem ydefgnlkkk fraktqqaea
      301 arvlpgsgra gweveelgvi drdgrersrd rgrerddres sknreredre rrrsrsrerd
      361 rgkdrsrdyd yerdrdygrd rdrgryfy
//
LOCUS       XP_040942214             629 aa            linear   PLN 06-AUG-2024
DEFINITION  adagio protein 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942214
VERSION     XP_040942214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086280.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="adagio protein 3 isoform X1"
                     /calculated_mol_wt=69774
     Region          <57..>167
                     /region_name="PRK13558"
                     /note="bacterio-opsin activator; Provisional"
                     /db_xref="CDD:237426"
     Region          214..260
                     /region_name="F-box_AtADO-like"
                     /note="F-box domain found in Arabidopsis thaliana Adagio
                     proteins (AtADO1/2/3) and similar proteins; cd22154"
                     /db_xref="CDD:438925"
     Site            order(218,223,226..227,230..231,235,237..238,242..244,246)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438925"
     Region          309..606
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          309..357
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          361..410
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          413..458
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          466..541
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..629
                     /gene="LOC107922146"
                     /coded_by="XM_041086280.1:121..2010"
                     /db_xref="GeneID:107922146"
ORIGIN      
        1 mskgeevmqs sgkrqrfakd evkrqemeeq qqqedddeee esqlpkkpgl lyypttptsf
       61 vvsdalepdf piiyvnkvfe vftgyradev lgrncrflqy rdqcaqrrhp lvdpfvvsei
      121 rrcleegief qgellnfrkd gtplvnilkl apihdddgiv thiigiqvfs eakldlnrvs
      181 ypvfketcnq qldesaqysh fsnppfsqhr eicgilqlsd evlahnilsr ltprdvasig
      241 svcrrirqlt knehvrkmvc qnawgrevtg tlemmtkklg wgrlareltt leavcwrklt
      301 vggavepsrc nfsacaagnr lvlfggegvn mqpmddtfvl nldaanpawq rvsvessppg
      361 rwghtlscln gswlvvfggc grqgllndvf vldldakqpt wkevsggapp lprswhssct
      421 idgsklvvsg gctdagvlls dtylldlttd kptwkeipts wappsrlghs lsvygrtkil
      481 mfgglaksgn lrlrsgeayt idledeepqw rqldcsafts vgsqnavvpp prldhvavsm
      541 pcgriiifgg siaglhspsq lflldpseek pswrtlnvpg qppkfawghs tcvvggtrvl
      601 vlgghtgeew ilnelhelcl asrqdsdss
//
LOCUS       XP_040942215             549 aa            linear   PLN 06-AUG-2024
DEFINITION  adagio protein 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942215
VERSION     XP_040942215.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086281.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..549
                     /product="adagio protein 3 isoform X2"
                     /calculated_mol_wt=61346
     Region          <57..>167
                     /region_name="PRK13558"
                     /note="bacterio-opsin activator; Provisional"
                     /db_xref="CDD:237426"
     Region          214..260
                     /region_name="F-box_AtADO-like"
                     /note="F-box domain found in Arabidopsis thaliana Adagio
                     proteins (AtADO1/2/3) and similar proteins; cd22154"
                     /db_xref="CDD:438925"
     Site            order(218,223,226..227,230..231,235,237..238,242..244,246)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438925"
     Region          309..>490
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          309..357
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          361..410
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          413..458
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..549
                     /gene="LOC107922146"
                     /coded_by="XM_041086281.1:83..1732"
                     /db_xref="GeneID:107922146"
ORIGIN      
        1 mskgeevmqs sgkrqrfakd evkrqemeeq qqqedddeee esqlpkkpgl lyypttptsf
       61 vvsdalepdf piiyvnkvfe vftgyradev lgrncrflqy rdqcaqrrhp lvdpfvvsei
      121 rrcleegief qgellnfrkd gtplvnilkl apihdddgiv thiigiqvfs eakldlnrvs
      181 ypvfketcnq qldesaqysh fsnppfsqhr eicgilqlsd evlahnilsr ltprdvasig
      241 svcrrirqlt knehvrkmvc qnawgrevtg tlemmtkklg wgrlareltt leavcwrklt
      301 vggavepsrc nfsacaagnr lvlfggegvn mqpmddtfvl nldaanpawq rvsvessppg
      361 rwghtlscln gswlvvfggc grqgllndvf vldldakqpt wkevsggapp lprswhssct
      421 idgsklvvsg gctdagvlls dtylldlttd kptwkeipts wappsrlghs lsvygrtkil
      481 mfgglaksgn lrlrsgeayt idledeepqw rqldcsafts vgsqnavgct lllscfswil
      541 rrrnhhggh
//
LOCUS       XP_040942216             203 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942216
VERSION     XP_040942216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086282.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=22672
     Region          1..202
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..203
                     /gene="LOC107921597"
                     /coded_by="XM_041086282.1:556..1167"
                     /db_xref="GeneID:107921597"
ORIGIN      
        1 misnirhtnl veligccved shralvyeyl ennslasvll ssrskhiald wptraaiclg
       61 tasavaflhy eavlhiihrd ikasnilldg nfhpkigdfr laklfpdnvt histrvagtf
      121 gylaleytll gqltkkadvy sfgvlllgii sgkssskaaf gvefmlllew twklkeedrl
      181 ldivdpelsq yleeevlrfi kvv
//
LOCUS       XP_040942217             203 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942217
VERSION     XP_040942217.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086283.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=22672
     Region          1..202
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..203
                     /gene="LOC107921597"
                     /coded_by="XM_041086283.1:829..1440"
                     /db_xref="GeneID:107921597"
ORIGIN      
        1 misnirhtnl veligccved shralvyeyl ennslasvll ssrskhiald wptraaiclg
       61 tasavaflhy eavlhiihrd ikasnilldg nfhpkigdfr laklfpdnvt histrvagtf
      121 gylaleytll gqltkkadvy sfgvlllgii sgkssskaaf gvefmlllew twklkeedrl
      181 ldivdpelsq yleeevlrfi kvv
//
LOCUS       XP_016706918             203 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_016706918
VERSION     XP_016706918.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851429.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706918.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=22672
     Region          1..202
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..203
                     /gene="LOC107921597"
                     /coded_by="XM_016851429.2:594..1205"
                     /db_xref="GeneID:107921597"
ORIGIN      
        1 misnirhtnl veligccved shralvyeyl ennslasvll ssrskhiald wptraaiclg
       61 tasavaflhy eavlhiihrd ikasnilldg nfhpkigdfr laklfpdnvt histrvagtf
      121 gylaleytll gqltkkadvy sfgvlllgii sgkssskaaf gvefmlllew twklkeedrl
      181 ldivdpelsq yleeevlrfi kvv
//
LOCUS       XP_040942218             203 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942218
VERSION     XP_040942218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086284.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=22672
     Region          1..202
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..203
                     /gene="LOC107921597"
                     /coded_by="XM_041086284.1:392..1003"
                     /db_xref="GeneID:107921597"
ORIGIN      
        1 misnirhtnl veligccved shralvyeyl ennslasvll ssrskhiald wptraaiclg
       61 tasavaflhy eavlhiihrd ikasnilldg nfhpkigdfr laklfpdnvt histrvagtf
      121 gylaleytll gqltkkadvy sfgvlllgii sgkssskaaf gvefmlllew twklkeedrl
      181 ldivdpelsq yleeevlrfi kvv
//
LOCUS       XP_040942219             203 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942219
VERSION     XP_040942219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086285.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=22672
     Region          1..202
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..203
                     /gene="LOC107921597"
                     /coded_by="XM_041086285.1:534..1145"
                     /db_xref="GeneID:107921597"
ORIGIN      
        1 misnirhtnl veligccved shralvyeyl ennslasvll ssrskhiald wptraaiclg
       61 tasavaflhy eavlhiihrd ikasnilldg nfhpkigdfr laklfpdnvt histrvagtf
      121 gylaleytll gqltkkadvy sfgvlllgii sgkssskaaf gvefmlllew twklkeedrl
      181 ldivdpelsq yleeevlrfi kvv
//
LOCUS       XP_040942220             203 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942220
VERSION     XP_040942220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086286.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=22672
     Region          1..202
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..203
                     /gene="LOC107921597"
                     /coded_by="XM_041086286.1:228..839"
                     /db_xref="GeneID:107921597"
ORIGIN      
        1 misnirhtnl veligccved shralvyeyl ennslasvll ssrskhiald wptraaiclg
       61 tasavaflhy eavlhiihrd ikasnilldg nfhpkigdfr laklfpdnvt histrvagtf
      121 gylaleytll gqltkkadvy sfgvlllgii sgkssskaaf gvefmlllew twklkeedrl
      181 ldivdpelsq yleeevlrfi kvv
//
LOCUS       XP_016707688             613 aa            linear   PLN 06-AUG-2024
DEFINITION  dynamin-related protein 1C [Gossypium hirsutum].
ACCESSION   XP_016707688
VERSION     XP_016707688.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707688.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..613
                     /product="dynamin-related protein 1C"
                     /calculated_mol_wt=68354
     Region          35..300
                     /region_name="DLP_1"
                     /note="Dynamin_like protein family includes dynamins and
                     Mx proteins; cd08771"
                     /db_xref="CDD:206738"
     Site            42..49
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206738"
     Site            order(43,45..50,63..64,69,142,212,214..215,241..245,248)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206738"
     Site            order(44..45,146,159,184,186,188..191,193..194,215,
                     217..220,244..246)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:206738"
     Site            69
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206738"
     Site            73..75
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206738"
     Site            142..145
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206738"
     Site            order(144..145,175..176)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206738"
     Site            211..214
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206738"
     Region          221..497
                     /region_name="Dynamin_M"
                     /note="Dynamin central region; pfam01031"
                     /db_xref="CDD:460033"
     Site            241..243
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206738"
     Region          519..610
                     /region_name="GED"
                     /note="Dynamin GTPase effector domain; pfam02212"
                     /db_xref="CDD:460495"
     CDS             1..613
                     /gene="LOC107922262"
                     /coded_by="XM_016852199.2:309..2150"
                     /db_xref="GeneID:107922262"
ORIGIN      
        1 matmesligl vnkiqractv lgdhggqgms lwealpsvav vggqssgkss vlesivgrdf
       61 lprgsgivtr rplvlqlhkt qsgaeyaefl hapkrrftdf aavrkeisde tdritgktkq
      121 isnipihlsi yspnvvnltl idlpgltkva vegqsdsive dienmvrsyv ekpnciilai
      181 tpanqdiats daiklarevd psgertfgvl tkldlmdkgt natevlegra yrlqhpwvgi
      241 vnrsqadink nvdmivarrk ereyfetspd yghlaskmgs eylakllsqh lelvirqrip
      301 siisminkti delnaeldri grpvaadgga qlymilelcr afdrvfkehl dggrpggdri
      361 ygvfdhqlpa alkklpfdrh lslknvqkvv teadgyqphl iapeqgyrrl idgsityfkg
      421 paeasvdavh fvlkelvrks iaeteelkrf pslqndiata anealerfre esrktvvrlv
      481 emessyltvd ffrklhaape kkpekngnpp gpnndhfhdt slarigsnvs ayiamvsdtl
      541 kntipkavvy cqvreakrsl lthfyaqvgr kekerlsaml dedpqlmekr tqiakrlely
      601 kaardeidav awk
//
LOCUS       XP_016706496             429 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ECERIFERUM 2 [Gossypium hirsutum].
ACCESSION   XP_016706496
VERSION     XP_016706496.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851007.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706496.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="protein ECERIFERUM 2"
                     /calculated_mol_wt=47246
     Region          18..410
                     /region_name="Transferase"
                     /note="Transferase family; pfam02458"
                     /db_xref="CDD:460564"
     CDS             1..429
                     /gene="LOC107921138"
                     /coded_by="XM_016851007.2:345..1634"
                     /db_xref="GeneID:107921138"
ORIGIN      
        1 mvsgslecpv rgemlssvvp akatggnkdl eltsmdlamk lhyikgayff qpeaaqglsi
       61 hdlkepmfqc lelyyaasgr irrsesgrpf ikcndggvri veaqcdksvd ewlamarnnd
      121 hmlahdqvlg pdlgfsplvf vqftrfkcgg vsvglswahv lgdafsasnf lnlwgqimag
      181 kqvplqpnsp ahnisqfpis isrkpfslkk vdpvgdywlt pnnskmvths fritakqlhy
      241 yittycihdp nkisdfeiil amiwqslska redsgpnivt icsnnsadkm amlpsngmtl
      301 stveadfcvs kveigelakl iaekrmdeng ligelikgde vrsdfivyga nltfvnlegm
      361 nvygiemkgl kpvcvnymmn gvgeegtvvv lpsnekdggn ngkmvtitlp qhlllklnnr
      421 lqidwnivi
//
LOCUS       XP_016706452             199 aa            linear   PLN 06-AUG-2024
DEFINITION  XIAP-associated factor 1 [Gossypium hirsutum].
ACCESSION   XP_016706452
VERSION     XP_016706452.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850963.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="XIAP-associated factor 1"
                     /calculated_mol_wt=22550
     Region          <9..127
                     /region_name="PLN03086"
                     /note="PRLI-interacting factor K; Provisional"
                     /db_xref="CDD:178635"
     CDS             1..199
                     /gene="LOC107921095"
                     /coded_by="XM_016850963.2:114..713"
                     /db_xref="GeneID:107921095"
ORIGIN      
        1 maiaseettr icnhcdraip ssnidlhyah csrnlerckv cgdmipkkha eehflnthap
       61 vacslcsetm ereilaihkg eicpqrivtc dfcefplpai dlaehqevcg nrtelchlcn
      121 ryvrlreryn hesrctgiae nnegssrdvr aaereqahpr rqaseysrrr ilftiaitgi
      181 avllgsllfq kktdsshvh
//
LOCUS       XP_040942221             137 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic
            [Gossypium hirsutum].
ACCESSION   XP_040942221
VERSION     XP_040942221.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086287.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..137
                     /product="1,4-alpha-glucan-branching enzyme 1,
                     chloroplastic/amyloplastic"
                     /calculated_mol_wt=15862
     Region          <1..>137
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
     CDS             1..137
                     /gene="LOC107933414"
                     /coded_by="XM_041086287.1:1139..1552"
                     /db_xref="GeneID:107933414"
ORIGIN      
        1 mtsqehsyya sfgyylhrni gsnlfvavsr fgtpddhksl idkahelgil vlmdivhsha
       61 snnvldglnm fdgtdghyfh tgsrrhhsmw dsrlfnygsw dvlryllsna rwwleeykfd
      121 gyifdgvtsi myihhgl
//
LOCUS       XP_040942222             131 aa            linear   PLN 06-AUG-2024
DEFINITION  insulin-degrading enzyme-like 1, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040942222
VERSION     XP_040942222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086288.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="insulin-degrading enzyme-like 1, peroxisomal"
                     /calculated_mol_wt=15209
     Region          <3..109
                     /region_name="PRK15101"
                     /note="protease3; Provisional"
                     /db_xref="CDD:185056"
     CDS             1..131
                     /gene="LOC121213518"
                     /coded_by="XM_041086288.1:36..431"
                     /db_xref="GeneID:121213518"
ORIGIN      
        1 mfesklsemk ndefksnvna linmklekhk nlseesqfyw teiisgtpkf drreaeveal
       61 kkltqqelid ffdentkvga prkktlsvrv ygnqhlaecn sqkseavqpn tvqiddifsf
      121 rrsrplyasf r
//
LOCUS       XP_016755402             310 aa            linear   PLN 06-AUG-2024
DEFINITION  probable xyloglucan endotransglucosylase/hydrolase protein 33
            [Gossypium hirsutum].
ACCESSION   XP_016755402
VERSION     XP_016755402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016899913.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="probable xyloglucan
                     endotransglucosylase/hydrolase protein 33"
                     /calculated_mol_wt=34849
     Region          41..309
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Site            order(106,108,110,123,125,127,140,142,155,210,212)
                     /site_type="active"
                     /db_xref="CDD:185683"
     Site            order(123,125,127)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:185683"
     CDS             1..310
                     /gene="LOC107963367"
                     /coded_by="XM_016899913.1:1..933"
                     /db_xref="GeneID:107963367"
ORIGIN      
        1 maifqhiill lclslfcmts lvsshnkhyt tptvprltdl fshvsvnqsf snvfggpnik
       61 ilnngstatf aldrtsgsgl aswnkynyrf fsaaiklpag ltsgvvvafy lsnadmyphs
      121 hdeidiellg ndkridwvlq tnvyangvst greekfyfwf nptlqhhyys ilwnnhhivf
      181 lvdnipvref pnngkfsaah plkpmslyvt iwdgsqwath ggkypvnyky apfvtsltdv
      241 emvgcivnpk qpnsscssas vssidpvegp dfvklsnqqm samvwarrkl mfysyckdts
      301 rfkvlppeck
//
LOCUS       XP_040942223             119 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1-like [Gossypium hirsutum].
ACCESSION   XP_040942223
VERSION     XP_040942223.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086289.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="EH domain-containing protein 1-like"
                     /calculated_mol_wt=13603
     Region          <15..50
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..119
                     /gene="LOC107921032"
                     /coded_by="XM_041086289.1:249..608"
                     /db_xref="GeneID:107921032"
ORIGIN      
        1 mmdallemmq ssflvwatad skrqgflsfk efvfamqlvs laqeghqish dflngdvdfe
       61 nirppvmegl dtlimrkkqs skssslesnd ifvlcdfnyr rlkeivssev eafrsyisf
//
LOCUS       XP_016706300             546 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence [Gossypium hirsutum].
ACCESSION   XP_016706300
VERSION     XP_016706300.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850811.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..546
                     /product="protein trichome birefringence"
                     /calculated_mol_wt=62387
     Region          189..239
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          241..528
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..546
                     /gene="LOC107920973"
                     /coded_by="XM_016850811.2:147..1787"
                     /db_xref="GeneID:107920973"
ORIGIN      
        1 mvdiakclpf ngttiktefk nlfsivktsr tlalfilsfv gftlflafgp sspwfttssd
       61 syrsqfpslf gylfpntssp sssnhtlqpl pndknkgtqp fnnseqlpss nntnmnytqs
      121 sflhanppst sspgekkdep dnhstiadan atvlanqstn fpakpensnk vrfkkgkgne
      181 slveslkicd lfdgnwvkds syplyepgsc sfvdhqfscf ahgrrdigyl kwkwkpkgct
      241 lprlngghml eilrgkrlvf vgdslnrnmw esllcilksa aknpktvhev pggryfrgep
      301 sssiifndyn csveffvspf lvrqwqmpdr ngtkkntlrl dligrsseiy ksadilvfnt
      361 ghwwnhekts kgedyyqegd hvyeelnvve afrralttws kwvddnvnps ktmvffrgys
      421 athfsggqwn sggvcdseme pirnetllrp ympmmavles vlegmkthvt ylnitrltdf
      481 rkdghpsiyr ryhkhgitek ertesvkyqd cshwclpgvp dtwnellyse llvkqykmrq
      541 hqhkfr
//
LOCUS       XP_040942225             417 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHLOEM PROTEIN 2-LIKE A10 [Gossypium hirsutum].
ACCESSION   XP_040942225
VERSION     XP_040942225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086291.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..417
                     /product="protein PHLOEM PROTEIN 2-LIKE A10"
                     /calculated_mol_wt=45677
     CDS             1..417
                     /gene="LOC107940265"
                     /coded_by="XM_041086291.1:265..1518"
                     /db_xref="GeneID:107940265"
ORIGIN      
        1 mdlqlvnnal tfsrrkkqwl illaicgvsg ygvykvynlp svvkkrkrlf klfgalisla
       61 elvsesaeti nvvseelkef lqsdsdqapn slkqiskivr seefsqslis vtealtvgvl
      121 rgyklesane kefaagsens sitdrvldrv fsnagtgfvs vvvgsfarnl vlgfyssvge
      181 veglsgnngs sdvpkwinvl yddkskelia dciqrlvsta vavyldktmd intydeifag
      241 mtnpkhqkhv rdtlvsvcng avetlvrtsh qvltssklns astcsifyqs agaggmrdgf
      301 ekevslkgvk rgssfdgiqn ngwvdkvlst wavpsnrkfv ldvtgrvtfe tlrslvlfil
      361 wmlseglkrs ihivheevve rgldviryvg akssiivtfc lalylhitgg srvlmpa
//
LOCUS       XP_016706380             366 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 1 [Gossypium hirsutum].
ACCESSION   XP_016706380
VERSION     XP_016706380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850891.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..366
                     /product="AT-hook motif nuclear-localized protein 1"
                     /calculated_mol_wt=37944
     Region          143..255
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(144,146,149,174..175,192,199..202,204,206,221,223,
                     225,228,231,233..235,249,251,253,255)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..366
                     /gene="LOC107921039"
                     /coded_by="XM_016850891.2:199..1299"
                     /db_xref="GeneID:107921039"
ORIGIN      
        1 meekestisg slgnsetdsp papvsslqvl plvmninnms setattmtst vipgpggrtl
       61 sdslgkkkrg rprkydadgn lrvpyqivtt ttnsppgftl spssptefss hkrgkgrspr
      121 nwqllaslge lfaytaggdf tahvvkvntg edvagkvvsl sqkgprgici lsangavsnv
      181 tlrqpgssgg iltfegrfei lsltgsftfs enggvksrtg glsvslagsd grviggglag
      241 vllaaspiqi vvgsfmlngy kvhkrkpyre qhtvaasava tapsamamae egrpiisqak
      301 ldcennvkpt spfqvgslee asknitdhkn ianiaaasiv sgwnngsepa sihrpspdin
      361 vsvpse
//
LOCUS       XP_016706325             158 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-kinase alpha 2-like [Gossypium hirsutum].
ACCESSION   XP_016706325
VERSION     XP_016706325.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850836.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706325.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..158
                     /product="phosphatidylinositol 4-kinase alpha 2-like"
                     /calculated_mol_wt=18222
     CDS             1..158
                     /gene="LOC107920989"
                     /coded_by="XM_016850836.2:474..950"
                     /db_xref="GeneID:107920989"
ORIGIN      
        1 msreklrraa lppvqenssf lellpivrqh iidgftpkal dvfrrefdff dkvtsisgvl
       61 fplpkeerra girrelekiq vqgddlylpt apnklvceld rthyglnclh istkfylvpi
      121 ilgkfktpfm claahvgtfm hqlwgylpff sykrqgil
//
LOCUS       XP_016707932             567 aa            linear   PLN 06-AUG-2024
DEFINITION  TBCC domain-containing protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707932
VERSION     XP_016707932.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852443.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..567
                     /product="TBCC domain-containing protein 1"
                     /calculated_mol_wt=62203
     Region          331..446
                     /region_name="TBCC"
                     /note="Tubulin binding cofactor C; pfam07986"
                     /db_xref="CDD:462331"
     CDS             1..567
                     /gene="LOC107922413"
                     /coded_by="XM_016852443.2:153..1856"
                     /db_xref="GeneID:107922413"
ORIGIN      
        1 madpiepsts ssdpnsipip tailhprrep fehglltiqk lifndpvqal tplkqkfasp
       61 stqrvdsaal aellqisfdh srlvletlas vlhsesdplv talpddvdsi gadlrdlilf
      121 lyiqsykrll prshkdsaav advwpsmsaf dgylsalspl qlvrsnsrrf mpsqadeeah
      181 qlsylqkhla nilsllsehm egeseeslvl tmegfehlgf liqfgdkgsg gvplsqaapf
      241 fansdpdmpa apvpvsqvhd wllqtiassl esitekvsak engspsgsdq diamadasps
      301 sakaspsars pcfvegvsks syvkqasdlk sssikvinch dstiyilapl ryaiiygcsd
      361 ativlgavgk avrvehcerv hviiaakrvc iancrecvff lgvnqrplfv gdnhklqvap
      421 yntyysqlee hltevgivst inrwdealsi svidphdsls hpagvsdaqs esatcldpdq
      481 ltnflipnwf enestgstkd npfplpdaym tsqqrnqknl seikqmlrea pleenwkrel
      541 ssalhvyfkd wlyasgnirq lyclqgd
//
LOCUS       XP_016739587             235 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L6-1 [Gossypium hirsutum].
ACCESSION   XP_016739587
VERSION     XP_016739587.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884098.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="60S ribosomal protein L6-1"
                     /calculated_mol_wt=26136
     Region          2..>49
                     /region_name="Ribosomal_L6e_N"
                     /note="Ribosomal protein L6, N-terminal domain; pfam03868"
                     /db_xref="CDD:427554"
     Region          83..235
                     /region_name="KOW_RPL6"
                     /note="KOW motif of Ribosomal Protein L6; cd13156"
                     /db_xref="CDD:240520"
     Site            order(83,85,101..105,107,118..119,126..130,132,134..137,
                     139..140,165,190,193..194,216,219..221,225..226)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240520"
     CDS             1..235
                     /gene="LOC107949445"
                     /coded_by="XM_016884098.2:77..784"
                     /db_xref="GeneID:107949445"
ORIGIN      
        1 maakrktpvk srnpdlirgv gkysrskmyh krglwaikak nggvfprhdp kpkapaaaaa
       61 ekppkfypae dvkkpllnkr kpkptklras itpgtvlill agrfmgkrvv flkqlpsgll
      121 lvtgpfking vplrrvnqsy viatstkvdi sgvnvekfdd kyfakevdkk kkkskgeffe
      181 aekedkkklp edkkedqksv dasliksieg vpdlkaylaa rfslksgmkp helvf
//
LOCUS       XP_016739588             235 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L6-1 [Gossypium hirsutum].
ACCESSION   XP_016739588
VERSION     XP_016739588.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884099.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="60S ribosomal protein L6-1"
                     /calculated_mol_wt=26136
     Region          2..>49
                     /region_name="Ribosomal_L6e_N"
                     /note="Ribosomal protein L6, N-terminal domain; pfam03868"
                     /db_xref="CDD:427554"
     Region          83..235
                     /region_name="KOW_RPL6"
                     /note="KOW motif of Ribosomal Protein L6; cd13156"
                     /db_xref="CDD:240520"
     Site            order(83,85,101..105,107,118..119,126..130,132,134..137,
                     139..140,165,190,193..194,216,219..221,225..226)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240520"
     CDS             1..235
                     /gene="LOC107949445"
                     /coded_by="XM_016884099.2:77..784"
                     /db_xref="GeneID:107949445"
ORIGIN      
        1 maakrktpvk srnpdlirgv gkysrskmyh krglwaikak nggvfprhdp kpkapaaaaa
       61 ekppkfypae dvkkpllnkr kpkptklras itpgtvlill agrfmgkrvv flkqlpsgll
      121 lvtgpfking vplrrvnqsy viatstkvdi sgvnvekfdd kyfakevdkk kkkskgeffe
      181 aekedkkklp edkkedqksv dasliksieg vpdlkaylaa rfslksgmkp helvf
//
LOCUS       XP_040942226             235 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L6-1 [Gossypium hirsutum].
ACCESSION   XP_040942226
VERSION     XP_040942226.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086292.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="60S ribosomal protein L6-1"
                     /calculated_mol_wt=26136
     Region          2..>49
                     /region_name="Ribosomal_L6e_N"
                     /note="Ribosomal protein L6, N-terminal domain; pfam03868"
                     /db_xref="CDD:427554"
     Region          83..235
                     /region_name="KOW_RPL6"
                     /note="KOW motif of Ribosomal Protein L6; cd13156"
                     /db_xref="CDD:240520"
     Site            order(83,85,101..105,107,118..119,126..130,132,134..137,
                     139..140,165,190,193..194,216,219..221,225..226)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240520"
     CDS             1..235
                     /gene="LOC107949445"
                     /coded_by="XM_041086292.1:77..784"
                     /db_xref="GeneID:107949445"
ORIGIN      
        1 maakrktpvk srnpdlirgv gkysrskmyh krglwaikak nggvfprhdp kpkapaaaaa
       61 ekppkfypae dvkkpllnkr kpkptklras itpgtvlill agrfmgkrvv flkqlpsgll
      121 lvtgpfking vplrrvnqsy viatstkvdi sgvnvekfdd kyfakevdkk kkkskgeffe
      181 aekedkkklp edkkedqksv dasliksieg vpdlkaylaa rfslksgmkp helvf
//
LOCUS       XP_040942227             235 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L6-1 [Gossypium hirsutum].
ACCESSION   XP_040942227
VERSION     XP_040942227.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086293.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="60S ribosomal protein L6-1"
                     /calculated_mol_wt=26136
     Region          2..>49
                     /region_name="Ribosomal_L6e_N"
                     /note="Ribosomal protein L6, N-terminal domain; pfam03868"
                     /db_xref="CDD:427554"
     Region          83..235
                     /region_name="KOW_RPL6"
                     /note="KOW motif of Ribosomal Protein L6; cd13156"
                     /db_xref="CDD:240520"
     Site            order(83,85,101..105,107,118..119,126..130,132,134..137,
                     139..140,165,190,193..194,216,219..221,225..226)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240520"
     CDS             1..235
                     /gene="LOC107949445"
                     /coded_by="XM_041086293.1:77..784"
                     /db_xref="GeneID:107949445"
ORIGIN      
        1 maakrktpvk srnpdlirgv gkysrskmyh krglwaikak nggvfprhdp kpkapaaaaa
       61 ekppkfypae dvkkpllnkr kpkptklras itpgtvlill agrfmgkrvv flkqlpsgll
      121 lvtgpfking vplrrvnqsy viatstkvdi sgvnvekfdd kyfakevdkk kkkskgeffe
      181 aekedkkklp edkkedqksv dasliksieg vpdlkaylaa rfslksgmkp helvf
//
LOCUS       XP_016739589             225 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABA4d [Gossypium hirsutum].
ACCESSION   XP_016739589
VERSION     XP_016739589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="ras-related protein RABA4d"
                     /calculated_mol_wt=24833
     Region          14..178
                     /region_name="Rab11_like"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; cd01868"
                     /db_xref="CDD:206660"
     Site            14..18
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206660"
     Site            23..30
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206660"
     Site            order(25..31,42,45,48,74,129..130,132,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206660"
     Site            order(31..42,44..47)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206660"
     Site            order(41,46..54)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206660"
     Site            order(46,50..57,64,66)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206660"
     Site            order(49,51..53,68,70,77..78,81,85,87..90,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     Site            order(49..50,52,70..71,78,80,82..84)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            49..53
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206660"
     Site            66..70
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206660"
     Site            71..74
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206660"
     Site            order(74,76..86)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206660"
     Site            77..82
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206660"
     Site            85..89
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206660"
     Site            94..99
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206660"
     Site            122..126
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206660"
     Site            129..132
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206660"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206660"
     Site            175..178
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206660"
     CDS             1..225
                     /gene="LOC107949446"
                     /coded_by="XM_016884100.2:399..1076"
                     /db_xref="GeneID:107949446"
ORIGIN      
        1 msnirggdfn qkidyvfkvv ligdsavgks qllarfsrnq fsldskatig vefqtktlvi
       61 dnktvkaqiw dtagqeryra vtsayyrgav gamlvydmtk rqsfdnmarw leelrghadk
      121 nivvmlignk cdlgslravp tedaqefaqr enlffmetsa lestnvetaf ltilteiyri
      181 iskktlsand eldangnsgl lkgtriivpn qepqiqnqgg ccggs
//
LOCUS       XP_016739590             111 aa            linear   PLN 06-AUG-2024
DEFINITION  rRNA biogenesis protein RRP5 [Gossypium hirsutum].
ACCESSION   XP_016739590
VERSION     XP_016739590.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016739590.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..111
                     /product="rRNA biogenesis protein RRP5"
                     /calculated_mol_wt=11760
     Region          40..>71
                     /region_name="S1_like"
                     /note="Ribosomal protein S1-like RNA-binding domain. Found
                     in a wide variety of RNA-associated proteins. Originally
                     identified in S1 ribosomal protein. This superfamily also
                     contains the Cold Shock Domain (CSD), which is a homolog
                     of the S1 domain. Both domains...; cl09927"
                     /db_xref="CDD:471952"
     Site            order(48,56,66,68)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:238094"
     CDS             1..111
                     /gene="LOC107949448"
                     /coded_by="XM_016884101.2:328..663"
                     /db_xref="GeneID:107949448"
ORIGIN      
        1 malpspetsg rlflllnsig evtetssskq akkkssynvg slvpaevtki mplelrlkfg
       61 igfcgrvhit edlsikpaml aeaqkrsfqg lgaapnskcc cgdcertllg m
//
LOCUS       XP_016739591             501 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor E2FA isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016739591
VERSION     XP_016739591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884102.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..501
                     /product="transcription factor E2FA isoform X1"
                     /calculated_mol_wt=55243
     Region          169..233
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Site            order(245,248..249,251..252,255..256,258..259,262..263,
                     265..266,268..270,272..273,276,284..289,292..293,296,
                     300..308,330..337,339..342,344)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271137"
     Region          245..278
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271137"
     Region          248..348
                     /region_name="E2F_CC-MB"
                     /note="E2F transcription factor CC-MB domain; pfam16421"
                     /db_xref="CDD:465115"
     Site            order(310..319,321..322,331)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271137"
     CDS             1..501
                     /gene="LOC107949449"
                     /coded_by="XM_016884102.2:188..1693"
                     /db_xref="GeneID:107949449"
ORIGIN      
        1 msgvarasac ptspqpppsm tavsapapsa psivppirrh lafasmkppf vhpddyhrfs
       61 snnsnnnltt gnntrgiiad qeveaivvrs pklkrksttv nkevessqwt tsprvtstan
      121 spfqtpvsak ggrinnrska skanksalqt pvsnasspap ltpagscryd sslgfltkkf
      181 inlikhaedg ildlnkaaet levqkrriyd itnvlegigl iekklknkir wkgvddsrpe
      241 adgdvsllqa eienltmkeh tlddqiremq erlrdlsene nnqrwlfvte edikglpcfr
      301 netliaikap hgttlevpdp deavdypqrr yrmilrstmg sidvylvsqf ekfeevngve
      361 ppasvslass sgsnenqvel vnvertrkei epqavqthqm dcdvnasqes vggmmrivps
      421 didndadywl lsdadvsitd mwktdcvews gvdildanfg madistprpq sppsrmvevp
      481 spafnsthri mqfsvveqim g
//
LOCUS       XP_040942228             493 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor E2FA isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942228
VERSION     XP_040942228.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086294.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="transcription factor E2FA isoform X2"
                     /calculated_mol_wt=54325
     Region          169..233
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Site            order(245,248..249,251..252,255..256,258..259,262..263,
                     265..266,268..270,272..273,276,284..289,292..293,296,
                     300..308,330..337,339..342,344)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271137"
     Region          245..278
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271137"
     Region          248..348
                     /region_name="E2F_CC-MB"
                     /note="E2F transcription factor CC-MB domain; pfam16421"
                     /db_xref="CDD:465115"
     Site            order(310..319,321..322,331)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271137"
     CDS             1..493
                     /gene="LOC107949449"
                     /coded_by="XM_041086294.1:159..1640"
                     /db_xref="GeneID:107949449"
ORIGIN      
        1 msgvarasac ptspqpppsm tavsapapsa psivppirrh lafasmkppf vhpddyhrfs
       61 snnsnnnltt gnntrgiiad qeveaivvrs pklkrksttv nkevessqwt tsprvtstan
      121 spfqtpvsak ggrinnrska skanksalqt pvsnasspap ltpagscryd sslgfltkkf
      181 inlikhaedg ildlnkaaet levqkrriyd itnvlegigl iekklknkir wkgvddsrpe
      241 adgdvsllqa eienltmkeh tlddqiremq erlrdlsene nnqrwlfvte edikglpcfr
      301 netliaikap hgttlevpdp deavdypqrr yrmilrstmg sidvylvsqf ekfeevngve
      361 ppasvslass sgsnenqvel vnvertrkei epqavqthqm dcdvnasqes vggmmrivps
      421 didndadywl lsdadvsitd mwktdcvews gvdildanfg madistprpq sppsrmvevp
      481 spafnsthrg cwv
//
LOCUS       XP_016741241             191 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor OFP6 [Gossypium hirsutum].
ACCESSION   XP_016741241
VERSION     XP_016741241.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885752.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741241.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..191
                     /product="transcription repressor OFP6"
                     /calculated_mol_wt=21155
     Region          114..171
                     /region_name="Ovate"
                     /note="Transcriptional repressor, ovate; pfam04844"
                     /db_xref="CDD:461454"
     CDS             1..191
                     /gene="LOC107950793"
                     /coded_by="XM_016885752.2:219..794"
                     /db_xref="GeneID:107950793"
ORIGIN      
        1 msstnkkkli lntasislgc rsckilklts vfnpkpklqs pynlsssnss nnkttpynsm
       61 sefgtptsfs shttnqywqm dietdkeamc sppattvrgl griggeslav ekdsddpyld
      121 frysmlqmil ekqiyskdel kellncflnl nssyyhgiil saftdiwkgl fsikpggggs
      181 phllsqfyad m
//
LOCUS       XP_016741242             201 aa            linear   PLN 06-AUG-2024
DEFINITION  casparian strip membrane protein 1 [Gossypium hirsutum].
ACCESSION   XP_016741242
VERSION     XP_016741242.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741242.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="casparian strip membrane protein 1"
                     /calculated_mol_wt=21159
     Region          37..175
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..201
                     /gene="LOC107950794"
                     /coded_by="XM_016885753.2:28..633"
                     /db_xref="GeneID:107950794"
ORIGIN      
        1 mksgdhaaid vlaessaavk gkapliasqr eekrglnrgf giadfllrlg aiistiaaaa
       61 tmgtsdetlp lftqffqfea sfddlptfly fviamalvgg ylllslpfsi vtivrpiava
      121 prlllfildt vtltfataas gaaaaivyla etgnpntnwl aicdqfedfc stvsgavvas
      181 fvtvvvfvvl vilsgfalkr q
//
LOCUS       XP_016741243             201 aa            linear   PLN 06-AUG-2024
DEFINITION  casparian strip membrane protein 1 [Gossypium hirsutum].
ACCESSION   XP_016741243
VERSION     XP_016741243.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741243.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="casparian strip membrane protein 1"
                     /calculated_mol_wt=21109
     Region          37..176
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..201
                     /gene="LOC107950795"
                     /coded_by="XM_016885754.2:36..641"
                     /db_xref="GeneID:107950795"
ORIGIN      
        1 mksgdhaaid vpaessaavk gkapliasqr eekrglnrgf giadfllrlg aiistiaaaa
       61 tmgtsdetlp lftqffqfea sfddlptfly fviamalvgg ylllslpfsi vtivrpiava
      121 prlllfildt vtltfataas gaaaaivyla etgnpntnwl aicdqfedfc stvsgavvas
      181 fvtvvvlvvl vilsgfalkr q
//
LOCUS       XP_016739594             150 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S14-3 [Gossypium hirsutum].
ACCESSION   XP_016739594
VERSION     XP_016739594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884105.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="40S ribosomal protein S14-3"
                     /calculated_mol_wt=16208
     Region          9..139
                     /region_name="PTZ00129"
                     /note="40S ribosomal protein S14; Provisional"
                     /db_xref="CDD:185465"
     CDS             1..150
                     /gene="LOC107949453"
                     /coded_by="XM_016884105.2:188..640"
                     /db_xref="GeneID:107949453"
ORIGIN      
        1 msrrkvrdpk eenttlgpav rdgehvfgva hifasfndtf ihvtdlsgre tmvritggmk
       61 vkadrdessp yaamlaaqdv sqrckelgit alhiklratg gnktktpgpg aqsalralar
      121 sgmkigried vtpiptdstr rkggrrgrrl
//
LOCUS       XP_040942229             339 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942229
VERSION     XP_040942229.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086295.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37908
     Region          1..91
                     /region_name="SNARE_NTD_STX6-like"
                     /note="N-terminal domain of syntaxin-6 and similar
                     proteins; cd21442"
                     /db_xref="CDD:410568"
     CDS             1..339
                     /gene="LOC107949455"
                     /coded_by="XM_041086295.1:96..1115"
                     /db_xref="GeneID:107949455"
ORIGIN      
        1 mesffrlllh ektllqsdlp dpklltsigy htrdlatvle takwqledfe ravnssarmd
       61 qshsrehvis rhkqfirair gqindveksl edmemgnpmk kskwgnlnqq drdglalfls
      121 ggnhnehdvg fdldpvpasc stdagivang cgeieevntn gvaysshyyg smkennlrkv
      181 gshysiklgv daanscngns qdrsmdleas eskpksslhe nklrssssqi nlfrffnnlw
      241 srvpsnytkr lkdgeevhtp lhidtslaaq gqhiglssap gdnsgflvkv mhlrrrlgac
      301 darfarfsyl fklnrrsvqm iltivfafml lgilvshvt
//
LOCUS       XP_040942230             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942230
VERSION     XP_040942230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086296.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41423
     Region          74..352
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..369
                     /gene="LOC107949456"
                     /coded_by="XM_041086296.1:95..1204"
                     /db_xref="GeneID:107949456"
ORIGIN      
        1 magkisaasa rahtrkskqn tsfkllsgif tktllvlfvg alawayqaiq ppppktcgsp
       61 dgppvtasri klrdgrhlay kehgvplgaa kykivkvhgf dscrldavpl spelverlgi
      121 yfvsfdrpgy gesdpnpkrt vksmaldiee ladqlrlgsk fyvigismgg qviwsclkyi
      181 phrlagatlv apavnywwsg fptnlsnqay qqmlpqdqwv lrvshyapwl tywwntqkwf
      241 psssviansi difssedrkl lmkisstrnq aaqvrqqgey eslhrdlivg fgawefsple
      301 ldnpfpnneg svhvwhgded rfvpitlqry iaeqlpwiry helpgaghlf mvadgmwdni
      361 vktllvgek
//
LOCUS       XP_016739598             166 aa            linear   PLN 06-AUG-2024
DEFINITION  iron-sulfur assembly protein IscA-like 2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016739598
VERSION     XP_016739598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="iron-sulfur assembly protein IscA-like 2,
                     mitochondrial"
                     /calculated_mol_wt=18134
     Region          9..165
                     /region_name="Fe-S_biosyn"
                     /note="Iron-sulphur cluster biosynthesis; cl00400"
                     /db_xref="CDD:444888"
     CDS             1..166
                     /gene="LOC107949457"
                     /coded_by="XM_016884109.2:57..557"
                     /db_xref="GeneID:107949457"
ORIGIN      
        1 mnalnpipms rsliqrispf fiarikqnhk llsssfssss salheasses pspsldavhm
       61 tdncikrike lqaseqssdq mlrlsvetgg csgfqyvfdl ddktnpddrv fvregvklvv
      121 ddisydfvkg atidyveeli rsafvvttnp savggcscks sfmvkq
//
LOCUS       XP_016739599             157 aa            linear   PLN 06-AUG-2024
DEFINITION  glucosamine 6-phosphate N-acetyltransferase [Gossypium hirsutum].
ACCESSION   XP_016739599
VERSION     XP_016739599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="glucosamine 6-phosphate N-acetyltransferase"
                     /calculated_mol_wt=17586
     Region          10..156
                     /region_name="PLN02706"
                     /note="glucosamine 6-phosphate N-acetyltransferase"
                     /db_xref="CDD:178308"
     Site            order(97..99,109..110)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..157
                     /gene="LOC107949458"
                     /coded_by="XM_016884110.2:182..655"
                     /db_xref="GeneID:107949458"
ORIGIN      
        1 mensnssieg nnlrvrklel sdkskgflel lrqltvcdsv sdkefedrfk eismygddhv
       61 icviedeisg kiiasgsvfi ekkfirkcgk vghiedvvvd agsrgmqlgk kivgfladha
      121 rsmgcykvil dcsdgnkvfy ekcgfkkkei qmvkyfv
//
LOCUS       XP_016739600             157 aa            linear   PLN 06-AUG-2024
DEFINITION  glucosamine 6-phosphate N-acetyltransferase [Gossypium hirsutum].
ACCESSION   XP_016739600
VERSION     XP_016739600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884111.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="glucosamine 6-phosphate N-acetyltransferase"
                     /calculated_mol_wt=17586
     Region          10..156
                     /region_name="PLN02706"
                     /note="glucosamine 6-phosphate N-acetyltransferase"
                     /db_xref="CDD:178308"
     Site            order(97..99,109..110)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..157
                     /gene="LOC107949458"
                     /coded_by="XM_016884111.2:37..510"
                     /db_xref="GeneID:107949458"
ORIGIN      
        1 mensnssieg nnlrvrklel sdkskgflel lrqltvcdsv sdkefedrfk eismygddhv
       61 icviedeisg kiiasgsvfi ekkfirkcgk vghiedvvvd agsrgmqlgk kivgfladha
      121 rsmgcykvil dcsdgnkvfy ekcgfkkkei qmvkyfv
//
LOCUS       XP_016739601              73 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b-c1 complex subunit 9, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016739601
VERSION     XP_016739601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..73
                     /product="cytochrome b-c1 complex subunit 9,
                     mitochondrial"
                     /calculated_mol_wt=8415
     Region          18..64
                     /region_name="UCR_UQCRX_QCR9"
                     /note="Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like;
                     pfam05365"
                     /db_xref="CDD:461632"
     CDS             1..73
                     /gene="LOC107949459"
                     /coded_by="XM_016884112.2:372..593"
                     /db_xref="GeneID:107949459"
ORIGIN      
        1 mdytsrrrgq gglfeglyrv imrrnsvyvt fviagaflge ravdygvhrl weynnvgkry
       61 edipvlgqrq see
//
LOCUS       XP_016739602             522 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 12 [Gossypium
            hirsutum].
ACCESSION   XP_016739602
VERSION     XP_016739602.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016739602.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..522
                     /product="transcription initiation factor TFIID subunit
                     12"
                     /calculated_mol_wt=55931
     Region          370..443
                     /region_name="HFD_TAF12"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 12 (TAF12) and similar
                     proteins; cd07981"
                     /db_xref="CDD:467025"
     Site            order(370..373,377,381,384..385,399,402..404,406..408,
                     411..412,415,418,426..428,431..432,435,439,441,443)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467025"
     Site            order(391,395,399,420..422,433,437)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467025"
     CDS             1..522
                     /gene="LOC107949460"
                     /coded_by="XM_016884113.2:173..1741"
                     /db_xref="GeneID:107949460"
ORIGIN      
        1 mdqqqppppt pnapppssav dpppqpqpqp qiqqqttptp psstsstaip npnpnpipkp
       61 lpsaipppkq ppqpkpalps hqprsaaafs rpwqqhsaqf thfsssspsa ssspspslss
      121 qprgsialgv psshsgpspp spsppqstpf tgsfghsfgg tsssnvsqar pmmrgigmgs
      181 svgsssqmrp ggisaqhqqr plqsslrpts sptsqspstq nfqghglmrv savgsssstp
      241 stlqtpqspn qpwlssgaqg kpplpppwhr pqlrahipqq hhslqtvsqq qhvsspqvpp
      301 qnissiqqqe hfeqqfsqsr asqslphqqq dsrsqgsanq kpsslamvqp stvqvtqnka
      361 aitesddsgg rilskrsihd ivnqidpsek ldpevedilv diaedfvdsi ttfgcslakh
      421 rksdtleakd illhlernwn ltlpgfsgde iktykkpitn evhkerlavi kksilareaa
      481 nakhiigqta vntkgnvgka aaniwvlqml kyekyhealf ff
//
LOCUS       XP_016739603             249 aa            linear   PLN 06-AUG-2024
DEFINITION  protein YIPF5 homolog [Gossypium hirsutum].
ACCESSION   XP_016739603
VERSION     XP_016739603.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884114.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016739603.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..249
                     /product="protein YIPF5 homolog"
                     /calculated_mol_wt=26596
     Region          31..249
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..249
                     /gene="LOC107949461"
                     /coded_by="XM_016884114.2:232..981"
                     /db_xref="GeneID:107949461"
ORIGIN      
        1 mskqftvppv vfpsgggvnp nvgninqrrv ptapfqpsss aipfmafdmg svpsssgslg
       61 gtistsavsa sasfedeepl ldelgihpdq iwhktrsiln pfrvnlaahk dsdlsgpifl
      121 ylsfclfqll ggkiqfgiil gwivvssifl yvvfnmlagr nngnldlhtc tsvvgycmlp
      181 vvilsavslf mpqgigvvry atagvfvvwa trscanlmva ladgveehrg liayacfliy
      241 alfsllvif
//
LOCUS       XP_016739604             537 aa            linear   PLN 06-AUG-2024
DEFINITION  IQ domain-containing protein IQM3 [Gossypium hirsutum].
ACCESSION   XP_016739604
VERSION     XP_016739604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884115.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..537
                     /product="IQ domain-containing protein IQM3"
                     /calculated_mol_wt=59665
     CDS             1..537
                     /gene="LOC107949462"
                     /coded_by="XM_016884115.2:129..1742"
                     /db_xref="GeneID:107949462"
ORIGIN      
        1 meiienqaav snfdlqsksp fynisstdit nvgllgesef vsvdspnqas esdfptvvng
       61 gglkmllepl sdgrdspgsn qtrgggsshs naavkvqkvy rsyrtrrrla dsavvaeelw
      121 wlalnyarln hstisffnyl kpetaasrwn rvrlnaskvg kglsidakaq klafqhwiea
      181 idprhryghn lhiyydewck tdagqpffyw ldigdgkdvd leecsrsnlq kqlikylgpq
      241 erehyeyivv egkiihkqtr nvldtfqgsk evkwifvmst skklyagkkk kgmfhhssfl
      301 aggatlaagr lvvekgilks isaysghyrp tndslnsfls flkengvnld kveirhstdd
      361 sdsyddgkss ssvstfgfsa spvptepkin neeknlsles ydtkqpettn tyertlsggl
      421 ksprtevpkt ailqrinskk atksyqlghq lslkwstgag prigcvadyp lelrqqalef
      481 vnlsprtpnt pspfltprtp rtpttpsayr rpsnlppiat rptpndsntd atpgnqa
//
LOCUS       XP_016739606             435 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016739606
VERSION     XP_016739606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..435
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=49747
     Region          <364..432
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..435
                     /gene="LOC107949465"
                     /coded_by="XM_016884117.2:271..1578"
                     /db_xref="GeneID:107949465"
ORIGIN      
        1 mmarkhlhel lqedqepfll knyiadrrcq lkksppkthl qlhkpkpisq nsnfplnfck
       61 kaclfsfhds pdlnksplfq pitpntkntn gtafglfgsi lkrlthrtkn pkpetatkgs
      121 kvsvkdilrw dstvrknnvm sedkcgsssy tdrptsdvws qsneemdmdt scssspsgdf
      181 eevfisnevv gnnsafasfd khfsqsplrf vlqtspsfsa tspslherkq ekenyelesl
      241 krfqveeqee eqcspvsvld rpfedddrha ddddgdsgid cfdlestyaf vqrakqqllq
      301 klsrfeklae ldpielekrm leeeqddqdd ssssqsemni dgmkklvsdl iaeeemmqrd
      361 gcidkqaaae rvrkrldswk dvesntidmm veqdfkrahm egwkgneeev reagieveca
      421 ifgllmqeli eelvl
//
LOCUS       XP_016739607             434 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016739607
VERSION     XP_016739607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..434
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=49619
     Region          <363..431
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..434
                     /gene="LOC107949465"
                     /coded_by="XM_016884118.2:291..1595"
                     /db_xref="GeneID:107949465"
ORIGIN      
        1 mmarkhlhel lqedqepfll knyiadrrcq lkksppkthl qlhkpkpisq nsnfplnfck
       61 kaclfsfhds pdlnksplfq pitpntkntn gtafglfgsi lkrlthrtkn pkpetatkgs
      121 kvsvkdilrw dstvrknnvm sedkcgsssy tdrptsdvws qsneemdmdt scssspsgdf
      181 eevfisnevv gnnsafasfd khfsqsplrf vlqtspsfsa tspslherke kenyeleslk
      241 rfqveeqeee qcspvsvldr pfedddrhad dddgdsgidc fdlestyafv qrakqqllqk
      301 lsrfeklael dpielekrml eeeqddqdds sssqsemnid gmkklvsdli aeeemmqrdg
      361 cidkqaaaer vrkrldswkd vesntidmmv eqdfkrahme gwkgneeevr eagievecai
      421 fgllmqelie elvl
//
LOCUS       XP_040942234             145 aa            linear   PLN 06-AUG-2024
DEFINITION  UTP--glucose-1-phosphate uridylyltransferase [Gossypium hirsutum].
ACCESSION   XP_040942234
VERSION     XP_040942234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086300.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /calculated_mol_wt=15289
     Region          35..>83
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..145
                     /gene="LOC107949479"
                     /coded_by="XM_041086300.1:517..954"
                     /db_xref="GeneID:107949479"
ORIGIN      
        1 msyvgeekng akgtgkkati kdqvestses egsvsdevlv vpynnlapms cadiaeskql
       61 ldklvvvkyn galgknmgfg gpkkylasfe angvsvtvhe csllksfsts liianlyvai
      121 ypcivedsis sswksqglal lqvec
//
LOCUS       XP_040942235             367 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942235
VERSION     XP_040942235.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086301.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..367
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41557
     Region          <42..79
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          <109..155
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          188..284
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(193..196,226..228,231,255,281)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..367
                     /gene="LOC121213525"
                     /coded_by="XM_041086301.1:1..1104"
                     /db_xref="GeneID:121213525"
ORIGIN      
        1 msggtmysel raprkktaee mlrnlsinai ceeefeggkk ehvqvlkklf trlrkfqlkl
       61 npvkctfgvr sgkllgfvvs ergieidpdk vraiqelppp rtqkevrdpl kylmesaaln
      121 grmarwqill sefdvvyvnq kavkgsaiae flasralddy eplnfdfpnk dlmyaatvkk
      181 dfqeggpwkl sfdgasnaig ngigavlvsp sgdyypftsk ldfdctnnma eyeacimgir
      241 aaikrkikvl evygdsalvi yqlkgewetr dpklmadala tlasmfkvnk ledmkpiqis
      301 iyeapahccn idneegkddh pwyhdilryv ksreypdhat endkktlrrl aidyvldgei
      361 lykkgkd
//
LOCUS       XP_016709149             191 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 15 [Gossypium hirsutum].
ACCESSION   XP_016709149
VERSION     XP_016709149.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016853660.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016709149.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..191
                     /product="dirigent protein 15"
                     /calculated_mol_wt=21008
     Region          39..189
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..191
                     /gene="LOC107923464"
                     /coded_by="XM_016853660.2:1..576"
                     /db_xref="GeneID:107923464"
ORIGIN      
        1 mekqmifawa mifclamapv ygqyysrtvk agprvekith lhfyfhdirs gsnptaflia
       61 spnitqdpps ygtlfamddp lttefeltst lvgnaqglyl alsrdltkfs avfyadftft
      121 tgrfngssfs lfsrfpptdv vpapgtirem aivggtgkfr matgfallrp tsssntvgda
      181 nvefnvtlyh y
//
LOCUS       XP_016709147             189 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 15 [Gossypium hirsutum].
ACCESSION   XP_016709147
VERSION     XP_016709147.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016853658.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016709147.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="dirigent protein 15"
                     /calculated_mol_wt=21007
     Region          39..>154
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     Region          157..>187
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..189
                     /gene="LOC107923461"
                     /coded_by="XM_016853658.2:1..570"
                     /db_xref="GeneID:107923461"
ORIGIN      
        1 mesqmtlawa iifclavapv hgqyysrtvk agprvekitr lhfffhdirs gknataipia
       61 spntpqdppt ygtlyamddp ptmeseptst lignsqglyl dlsrertqft aiiyadfaft
      121 tgrfngssfs lfsrfsaada pstiremaiv ggrgnakkir kpkpwkhpqp itksqleqmr
      181 eefwdtaps
//
LOCUS       XP_016722640             187 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 15 [Gossypium hirsutum].
ACCESSION   XP_016722640
VERSION     XP_016722640.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867151.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722640.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..187
                     /product="dirigent protein 15"
                     /calculated_mol_wt=20800
     Region          39..185
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..187
                     /gene="LOC107934670"
                     /coded_by="XM_016867151.2:1..564"
                     /db_xref="GeneID:107934670"
ORIGIN      
        1 menqmifawa iifclavapv hgqyysrtvk agprvekitr lhfffhdirs genataipia
       61 spnttqdtpt ygtlyamddp ltmeseltst lignsqglyl dlsrertqft aifyadfaft
      121 tgrfngssfs lfsrfsaedd pstiremaiv ggrgafrmat gfallrpvws ntigdaivef
      181 nvtlyhy
//
LOCUS       XP_016722639             531 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At3g47110 [Gossypium
            hirsutum].
ACCESSION   XP_016722639
VERSION     XP_016722639.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867150.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722639.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..531
                     /product="putative receptor-like protein kinase At3g47110"
                     /calculated_mol_wt=58643
     Region          30..68
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          78..>524
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..429
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          457..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          507..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..531
                     /gene="LOC107934669"
                     /coded_by="XM_016867150.2:1..1596"
                     /db_xref="GeneID:107934669"
ORIGIN      
        1 mgntflnlai liifhfsmpt fsmklttilt dqsallalkd hvihdpenvl ttnwstsapv
       61 cnwfgvscgs khrrvtalnl tglglvgtlp phlgnlsfls llyvrnnsfy gglpvqlsnl
      121 rrlkylsfgn nsfsgeipsw lgsltelrtl flyqnnfkgv mpfslaylsk levlylfenq
      181 vsgsipstif nisslqeidl synmlsgsip svprdlllle vidfttnnlt ghipkdmfdh
      241 lpnlkglhws lnllsgripa slfkckelqv lslafnqmeg slpieignfs qlqdiyigrn
      301 hfegeipkqf vnltllrlfd cshgnftgii pheignlnnl nwlnlafnni agsippqlfn
      361 istlrmisld tnqlsghlps nmeelyldfn hladsipmyi snasqltlld vssnyfsgsi
      421 pdnlgnlrnl kilnlasnnl tssgmsflfs ltncrvlekf lfhsnpfisg elprvvgnls
      481 ssleefsass cnirgsipne ignlshlini elggnkligq vpttigglee l
//
LOCUS       XP_040942236             499 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942236
VERSION     XP_040942236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086302.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..499
                     /product="uncharacterized protein"
                     /calculated_mol_wt=56080
     CDS             1..499
                     /gene="LOC121213526"
                     /coded_by="XM_041086302.1:1..1500"
                     /db_xref="GeneID:121213526"
ORIGIN      
        1 mestesyqgi darelslvpg ldsvagaask cgkidagess rrldskkken evnnsssysk
       61 titvnqpgkv avnqqgsskq isdtrqntek iqfmpipmsc relyqnlfna hvvspyhlkp
      121 lqppypkwyd anaqcdyhag ieghfiehct afkmlverli smgvvkvdds pstenllpnl
      181 ndngvnmigg smgrkikedi aevkiplrwv wrnmvkrgli vlnskrsfek venyyefhhg
      241 egheiqeyae fralvqglid dkeiefyeev keegsictse ssklprvaqp vfiisrpkkd
      301 evrtpimpri iikkpatfsy qdsskvpwsy ecnttvpgke tskdqcvsan pesmkgaiig
      361 eqkgkivepv keeeaveflk flkyneynvv kqlhkqsari svlalllnle vhrnalmkml
      421 netyvskdif vskldrlvnn isadnfiffn ddeippggmg stkalhittr ckghillgvl
      481 idngsalndc hyshltgyp
//
LOCUS       XP_040942237             604 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase GSO2 [Gossypium
            hirsutum].
ACCESSION   XP_040942237
VERSION     XP_040942237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086303.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..604
                     /product="LRR receptor-like serine/threonine-protein
                     kinase GSO2"
                     /calculated_mol_wt=66707
     Region          35..>599
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..241
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          242..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..336
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..386
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          387..411
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          436..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          487..511
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          513..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          537..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          557..580
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..604
                     /gene="LOC107934654"
                     /coded_by="XM_041086303.1:1..1815"
                     /db_xref="GeneID:107934654"
ORIGIN      
        1 mgntflnlal liifhvsmpt fsmklttila dqsallalkd qvihdpenvl ttnlsasvpv
       61 cswfgvscgs khrrvtalnl tglglvgtlp phlgnlsfls lfyvthnsfy gglpvqfsnl
      121 rrlkylsfgn nsfsgeipsw lgsltelrrl flyqnnfkgv ipfslgylsk lqtlnltqnq
      181 ilgsipssif nisslqniyl gdnmlsgsip svprdllsle vidftfnnlg sipsvprdll
      241 slevidftfn nlgghipkdm fdhlpnlkel hlsvnllsgr ipaslfkcke lqmlslsynk
      301 megslpieig nlsmlqyfyi grnhfegeip kqivnlthlm efdcpennft giipheignl
      361 knllllnlgn nsfvgsippq vfnistlrii slggnqlsgh lpsnmglflp nmeilyldfn
      421 qlvgsipmyi ynasqltrld mstnyfsgsi pdnlgnlrnl kflnlennnl tssgmsflfs
      481 ltnfrvlkkl lfgtnpfisg efprvvgnls sslevfnawv chirgsipne ignlshliyi
      541 dlggnkiptt igglkelqsl sldddklegs ipselchlnk laflfltnnk lsgpipaclv
      601 isfh
//
LOCUS       XP_040942238             444 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor kinase-like protein Xa21 [Gossypium hirsutum].
ACCESSION   XP_040942238
VERSION     XP_040942238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086304.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..444
                     /product="receptor kinase-like protein Xa21"
                     /calculated_mol_wt=50095
     Region          <2..79
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          14..37
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..426
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(162..165,168,170,182,184,213,230..233,280,284..285,
                     287,297..298)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..444
                     /gene="LOC107934667"
                     /coded_by="XM_041086304.1:79..1413"
                     /db_xref="GeneID:107934667"
ORIGIN      
        1 mgsilesfde llslefldls rnnlsgeipk sleklrylky fnvsfnrleg eipeggpfen
       61 ytiesfkgne alcgaprlhv pncktrplrn skaktklkli iyvalpiast ilvvaliiii
      121 lqnkrkdkls tqedmiplgt wrrfsyhelr qatdgfndsr llgngsygsv fqgtlqdgtv
      181 iavkvfklel egafksfdve cdvlrntrhr nlvkvisscs ndlnfkalvl efmpngsldk
      241 wlysnnqyld ilqrlnimid vasaleylhh gnatpvvhcd lkpnnvllde dmvaylsdfg
      301 iakllceevs miqtmtmatf gymapeygie giistkgdvy sfgillmeii trkkptdemf
      361 agerslkswv iesissslnq vvdpkllsti grehlkvknc alsilqlgle ccvelpkdri
      421 hmkeivtklk kikvklvrdm ervr
//
LOCUS       XP_040942239             596 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Gossypium hirsutum].
ACCESSION   XP_040942239
VERSION     XP_040942239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086305.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..596
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At3g47570"
                     /calculated_mol_wt=65612
     Region          16..>596
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          99..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..340
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          365..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..465
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          466..489
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          490..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..596
                     /gene="LOC121203253"
                     /coded_by="XM_041086305.1:1..1791"
                     /db_xref="GeneID:121203253"
ORIGIN      
        1 mgntflnlal liifhfsmpt ffmkfttilt dqsallalkd qvihdpenvl ttnwsasapv
       61 cnwfgvscgs rhrrvtaldl aglglvgtlp phlgnlsfls llriknnsfy grlpaqlsnl
      121 hrlkylsfgk nnfkgvipfs lgylsklevl ylfenqisgs ipstifniss lqeidlsfnm
      181 lsgsipsvpr dllllevidf ttnnltghip kdmfdhlpnl kelclsvnql sgripaslfk
      241 ckeldmisls ynqmegslpi eignlsmlqy fsigenhfeg iipheidnlm nlqvlnlein
      301 nfagsippqi fnistlrmis lggnllsghl psnmglflpn meklylnlnh lvgsipmyis
      361 nafqltlldm sgnyfsgsip dnlgnlrnlk ilnlainslt ssrmsflfsl tncrvlenlf
      421 fginsfisge lprvvgnlss sleefsapac nirgnipsei gnlshlinle lgrnkligqi
      481 pttvggleel qslsfednkl egsipselch lnklaflffa niklsgpipa clgdltslrh
      541 lflgsnmfss sipstltrvn yllilnlssn slsgplpidi gkwhvltsld lsnnqf
//
LOCUS       XP_040942240             990 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_040942240
VERSION     XP_040942240.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086306.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..990
                     /product="receptor-like protein 6"
                     /calculated_mol_wt=110438
     Region          <67..>145
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          81..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          105..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..>911
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          207..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..326
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          327..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          351..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..399
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          400..425
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          426..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..472
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          473..498
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          522..546
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          547..588
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          618..640
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          641..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..687
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..711
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..737
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          738..765
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          766..826
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          827..850
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          851..874
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..990
                     /gene="LOC121213527"
                     /coded_by="XM_041086306.1:1..2973"
                     /db_xref="GeneID:121213527"
ORIGIN      
        1 mkgwliplyf llfslfftsc ssalplpscp hdqsaaltqf nnsfsvdalc qsaktiswkk
       61 gtncclwdgv kcdneagnvi tldlsfscli gplhsnstlf llrhlrqlnl agnhfnmspi
      121 asqfgkltsl thlnisesgf egkiplaisy lskllsldls dnhglifegh vfenvvknlt
      181 qlrhlhlsni dmssvaptsf inmssyittl ilennglqgk fpedvfhfpy lqkfelfeid
      241 nqlelkfpkt nwsgplkslq vsspylqelp dsvgnlrsle ildlgggnlk gpipaslgnl
      301 tqlehldlsh nnfdgpipcs vfnftqlqfl dlsknklvgs fpskvsglsq lsilrlhhnf
      361 lsgrvpswff tlpslvelml nsnklngnfe ltklselskl evlslsdnal ssftsasnsn
      421 yslprlvslq lsscnisefp nfvrnlegln flnlsynrih vieadmflkf kglqvldlsh
      481 niplsvgnns evdlvlpwls dlclsscnit elsnflttqe slmfldlsnn niqgriteqe
      541 nnwgsnlvnl dlsnnlltal eyypwksiel ldlgsnlieg pllapppstm aflisnnrln
      601 geipssicnp essylilyld lsynnlsgai skclglryhs ildlqmnkfy gnipdfwver
      661 nyglqilnln nndfdgslpk slanclglev lnlannkind tfphwlgdlp rlkvlvlrsn
      721 yfhgqiahsa neshfstlqi ldlsynrfsg flpttyfrnf kgmtnlasvp meyigadrsy
      781 yiyslaltik gvefmlervl tifaaidmss nrfegtipet vgnlislkvl nlshnhltgh
      841 ipsslgnlaq lesldlscnk lvgeipselt dlnflevlnl senqlvglip qgkqfntfln
      901 dsyvgntelc gfpvskscgh sdppsaifee eefdsafgld wkfvmmgygc glvfgfsagy
      961 immtirkpkw lvwmiqqagn rvlrrfkknr
//
LOCUS       XP_016722630            1040 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 19 [Gossypium hirsutum].
ACCESSION   XP_016722630
VERSION     XP_016722630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867141.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1040
                     /product="receptor-like protein 19"
                     /calculated_mol_wt=115718
     Region          <73..>151
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          111..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..>961
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          212..262
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          307..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..354
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          379..401
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          402..425
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          426..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..521
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          550..572
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          573..597
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          619..639
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          669..688
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          689..713
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          714..737
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          738..761
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          762..787
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          788..815
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          816..876
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          877..900
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          901..922
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1040
                     /gene="LOC107934661"
                     /coded_by="XM_016867141.2:1..3123"
                     /db_xref="GeneID:107934661"
ORIGIN      
        1 mkrwlipsyf vifslfftyn ssaltlpfcp hdqsaaliqf nssfsidcsg frqpsisrak
       61 tisweegtnc clwdgvkcdt etgnvialdl sfsclfgpfp snntlfllrh lrqlnlagnd
      121 frfspmasqf gqltslthln iswssfigkv ppeisrlskl lsldlsmsgl mfeghvfenm
      181 vanltqlrhl llsevnmsqv vptsflnmss yiqtlvlenn yelhgkfped vfrfpylqkf
      241 rvssnflelk fpktnwsapl kslqvtlsyl eelpdsigdl tsleildlpv nhlggpipas
      301 lgnltqlkyl dlsdnnlsgv lpvsafnlrq vqfvdfsgnk lagsfpsqvs elsqlsildl
      361 drnflsgrvp swlfslpslv llrlsnnklt gpidqfdkvt pleeaylqnn eiegpvpgsi
      421 allvnliyld lssnklsgnf dldklsklkk lesltlsnna llsftseska nyslpnllsl
      481 nlsscdiidf pdfvrnlegl reldlsnnri hvieanmfvk lkelqrldls hnsllslsns
      541 gnlslflpnl gylslsscnl tsfanfltiq eslrelylsn nsiqgqitkq ertwgsnlvi
      601 ldlsnnlltv veyypwrnik vlrldsnlle gpllvpppst svfsisnnkl tgevpysice
      661 fgteidaald lshnnlsgvi pkcaglania yldlhannfh gnipdfcvne nnmlstlnln
      721 dndfdgplpk slanclllev lilgnnkind tfpyslgnlp slqvlvlrsn nfhgqvinpd
      781 nqsyfsnlri ldlshnnfsg ylptnffksl egmmgladvd maymgdrfqy ytdsmvltmk
      841 gedivleril tifaaidmss nkfegtipet vgnlislqvl nfshnhltgh ipsslgnlva
      901 lesldlscne lvgeipselt glnflevlnl senqlvglip qgkqfntfln dsyagniglc
      961 gfpvskscgr sepppaifde eevdsafgld wkfvmmgygc glvfgfsagy immtirkpkw
     1021 lvgmiqragn rvlrrfkkyr
//
LOCUS       XP_016722633             282 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC1 [Gossypium hirsutum].
ACCESSION   XP_016722633
VERSION     XP_016722633.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867144.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..282
                     /product="receptor-like protein 9DC1"
                     /calculated_mol_wt=31643
     Region          <15..136
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <83..>226
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          94..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          190..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..282
                     /gene="LOC107934663"
                     /coded_by="XM_016867144.1:1..849"
                     /db_xref="GeneID:107934663"
ORIGIN      
        1 mssvvltsfr nmssyittli ieenglqgkf pedvfrfpyl qkfhfaifll esgqeqelel
       61 kfpktnwsgp lkslqvsspy lqelpdsign lrsleildls hsnlrwptpv slgnltqley
      121 ldlshnnlsg pipwsvfnlt qvqfldfskn klegslpsqv sglpqlsill fdhnflsgrv
      181 ptwlfslpsl vklrlnnnkl ngnfeldkls erskleqlsl sdnalssfts asnanyslpn
      241 lpwpalqqrt nsnklvkrpa aanctilaai lfcskemelv ql
//
LOCUS       XP_016722631             495 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_016722631
VERSION     XP_016722631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867142.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..495
                     /product="receptor-like protein 6"
                     /calculated_mol_wt=55397
     Region          8..32
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          30..>399
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          35..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          56..80
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          81..109
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          198..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..271
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          272..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..495
                     /gene="LOC107934662"
                     /coded_by="XM_016867142.2:1..1488"
                     /db_xref="GeneID:107934662"
ORIGIN      
        1 mflklkslkt ldlhnsplsv sdnsnlsvvl phldtlwlss cnitefsnfl tmqesltyld
       61 isnnsiqgqi tqkennwksy lqyldlsnnf ltalkyypwk nirflklgsn llegpllvpp
      121 isttvfsisk nrlngeipss icnlvdsefg vlldlahnnl sgaipkclgl rnifildlqm
      181 nrfhgnipgf cveenhrlqt lnlnnndfdg slpkslancv dlevlnlgnn kindifphwl
      241 gnlprlqvla lrsnyfhgqi thfeneshfs tlrildlshn kfsglmptty ftsfqgmmsl
      301 advqmgyiga edtyyrvsva vtmkgvdiel ekiptvlnfs hnhltghips slgnlvales
      361 ldlscnelvg eipseltgln flevlnlsen qlvglipqgk qfntflndsy agniglcgfp
      421 vskscgrsep ppaifdeeev dsafgldwkf vmmgygcgma fsagyimmti rkpkwlvgmv
      481 qrvgnkilkr fkkyr
//
LOCUS       XP_040942241             500 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_040942241
VERSION     XP_040942241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086307.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="receptor-like protein 6"
                     /calculated_mol_wt=55894
     Region          4..>500
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          33..57
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          58..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..296
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          297..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..343
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          344..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          438..458
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          459..483
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..500
                     /gene="LOC107934666"
                     /coded_by="XM_041086307.1:1..1503"
                     /db_xref="GeneID:107934666"
ORIGIN      
        1 mdvsgnvial dlsfsclvgp lqsnstlfll shlrqlnlag ntfnmspmas qfgqltslth
       61 lnisgsgfsg kiplaishls ellsgnygli feahvfenve ktltqlrhlh lsnidmssvv
      121 ptsfrnmssd ittrileeng lqgkfpedvf hfpylqkfhf aiflresgqe qelelkfskt
      181 nwsgplkslq vrraylqelp dsigdlrsle ildlhlfnlt qvqfldfsgn klvgslpskv
      241 sglsqlrilr lhhnflsyrv lswlftlpsl vqcmqlddml qhiwllasna nyslsnlarl
      301 elsscnisef pnfvrnlegl tdldlsynri hvieadmflk lkglkvldls hniplsvrdn
      361 sevdlvlpil nslllscnit elsnflttqe slevldlsnn niqgqiteqe nnwgsnlltl
      421 dlsnnlltal eyypwksirv lvlgsnlleg pllapppstm vfiisnnrln geipssicnp
      481 essnfivyld lsynnlsgai
//
LOCUS       XP_016722635             315 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 18 [Gossypium hirsutum].
ACCESSION   XP_016722635
VERSION     XP_016722635.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867146.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="receptor-like protein 18"
                     /calculated_mol_wt=35218
     Region          2..>243
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          19..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..315
                     /gene="LOC107934665"
                     /coded_by="XM_016867146.1:1..948"
                     /db_xref="GeneID:107934665"
ORIGIN      
        1 mnnfhgnipd fcverdpklr ilnlnnndfd gplpkslanc lrlevlnlgn nmindtfphw
       61 lgdlpwlrvl vlqsnyfhgq iahsanesyf stlqildlsh nkfsgflptt yftnfkgtmy
      121 lanvpmvyig asadqhyyte slvvtmkgvd imlegilmdm ssnrfegtip etvgnlisld
      181 vlnfshnhlt ghipsslgnl aalesldlsc nklvgeipse ltdlnflevi nlsenqlvgl
      241 ipqgkqfntf lndsyvgntg wihhddnset kmacwdgsts reqsseenqe kslrkmafem
      301 sdvcssmagw flsmc
//
LOCUS       XP_016722634             317 aa            linear   PLN 06-AUG-2024
DEFINITION  cytosolic sulfotransferase 12 [Gossypium hirsutum].
ACCESSION   XP_016722634
VERSION     XP_016722634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867145.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="cytosolic sulfotransferase 12"
                     /calculated_mol_wt=36895
     Region          3..313
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..317
                     /gene="LOC107934664"
                     /coded_by="XM_016867145.1:1..954"
                     /db_xref="GeneID:107934664"
ORIGIN      
        1 meyssfpsaf stlfgelpke twccsdlynw egfwyasshl paamaarlnf qakdtdvflt
       61 ssmktgttwl kaiiptimnp igcmnddnnd pllkrhpnel mpslefqlfk enpnpdlsym
      121 psprlfrthv pypmlpesvk nstckivyit rhpkdtfvsl whflnslvtt hgndpwpmne
      181 afdsfcrgvh afgpfhdhvl sywkesikrp ekilflryed mkkdpkvesr rmacflgrpf
      241 ekeeevdkvl wrcslerlkn levnkhgadp wlgfeykfyf rrgsvgdwkn nmnnemkekl
      301 dhitamkfeg sglgfgn
//
LOCUS       XP_016747079             379 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b561 and DOMON domain-containing protein At5g47530
            [Gossypium hirsutum].
ACCESSION   XP_016747079
VERSION     XP_016747079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891590.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..379
                     /product="cytochrome b561 and DOMON domain-containing
                     protein At5g47530"
                     /calculated_mol_wt=41232
     Region          36..186
                     /region_name="DOMON_CIL1_like"
                     /note="DOMON-like domain of Brassica carinata CIL1 and
                     similar proteins; cd09629"
                     /db_xref="CDD:187687"
     Site            order(75,77..78,91..93,166,168,182)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187687"
     Region          177..359
                     /region_name="Cyt_b561_FRRS1_like"
                     /note="Eukaryotic cytochrome b(561), including the FRRS1
                     gene product; cd08760"
                     /db_xref="CDD:176490"
     Site            order(205,239,274,310)
                     /site_type="other"
                     /note="putative heme binding sites [chemical binding]"
                     /db_xref="CDD:176490"
     CDS             1..379
                     /gene="LOC107955791"
                     /coded_by="XM_016891590.2:1..1140"
                     /db_xref="GeneID:107955791"
ORIGIN      
        1 masksfsfaf lllfflctfa aaepcdnhrf rggktfasci dlpslncslh wnfhsltqtv
       61 dvalrqnsvd qktrwmswai nphskgmvgs qalvafqkdd gtmvtytspi tsyatqlqkg
      121 dlsfpvngvs silegnemim fatlalpant ttvnhlwqeg plvgnvprmh plsgpnmgsm
      181 gtldflagkl vvdktssrnq wkvvhgilct lgwgflmpvg asiarhgkqw pgtawfrahv
      241 fsqcsaflig laggiigvll wlgalgarig ggihqyigit llglgaiqgi vgycrphked
      301 kkrvyfnifh cslgygtigl sianvflgfh mvhlmiktwp qvtyiaaisl lgtislileg
      361 vgcwrrttvr reiaaeetl
//
LOCUS       XP_040942243             332 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_040942243
VERSION     XP_040942243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086309.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..332
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=37152
     Region          58..>266
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          76..97
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          99..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          178..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..250
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..332
                     /gene="LOC121213528"
                     /coded_by="XM_041086309.1:1..999"
                     /db_xref="GeneID:121213528"
ORIGIN      
        1 mpfnlpiftf qlidftghip ialgnlgflv lldisdndls stlssskssl sylsfarnsl
       61 isgylpasig nllhslqyfn asscnisgsi pgeignwyvd yvdfsgnlfs gtipdricdr
      121 nndlrylafn dnqlegilpl slinysvlvs lnvadnnlsd tfphcllptk ffqnlkalke
      181 vgygyeseyd yeyrhgswrd rwlqalnlsh nnltgpipps fvnlavfesf allfnklsgi
      241 ipsqltnltf ldvlrfwnkn lvgpnpsgkq fntfendtyr akvlrslttk fdhvmaaiee
      301 tkdlsvlsvd elmgslqshe arinrsieks ee
//
LOCUS       XP_040942244             349 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942244
VERSION     XP_040942244.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086310.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..349
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39186
     Region          <1..42
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..199
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(80..83,113..115,118,142,182,196)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..349
                     /gene="LOC121213529"
                     /coded_by="XM_041086310.1:1..1050"
                     /db_xref="GeneID:121213529"
ORIGIN      
        1 mesaalngrm arwqillsef dvvyvnqkav kgsaiakfla sralddyepl nfdfpnedlm
       61 yaatvkkdfq eggpwklsfd gasnaigngi gavlvspsgd yypftskldf dctnnmaeye
      121 acimgiraai krkikvlevy gdsalviyql kgewetrdpk lvryrklvme lieefdsvtf
      181 sylprdenqm vdalatlasm fkvnkledmk piqisiyevp ahccnidnee gkddhpwyhd
      241 ilryvksrey pdhatendkk tlrrlaidyv ldgeilykkg kdqvllrcvd aveakeilee
      301 vhegseacgg lttpesqegv gdilgearaa isgapvvily feswqnlls
//
LOCUS       XP_016702069             121 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_016702069
VERSION     XP_016702069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846580.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..121
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=13697
     CDS             1..121
                     /gene="LOC107917203"
                     /coded_by="XM_016846580.1:1..366"
                     /db_xref="GeneID:107917203"
ORIGIN      
        1 mtflqvlrfs nnnfvgpiph gkqfdtfend syqgnlglcg fplskecsnd kisetaqdee
       61 dngngiafiw kvvmmgygcg mvlgismayi vfttgrpwwl vrmierdlrn kvstwfgkkr
      121 k
//
LOCUS       XP_040942245             508 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_040942245
VERSION     XP_040942245.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086311.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=56670
     Region          44..67
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <45..>448
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          68..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          212..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          364..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          388..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..508
                     /gene="LOC107917202"
                     /coded_by="XM_041086311.1:1..1527"
                     /db_xref="GeneID:107917202"
ORIGIN      
        1 mavllpnfvv sistktkidi skdqsalkal kvhvvtdpqn nlktkyfylf lnnfygeips
       61 wfdsfpklqy lslisnnlag eipsnifdhl prlqqlyleg nklsgkiplg lfkckeleyi
      121 sladnreksr hglipslnfn tlclsftnla geipsdmfdh lsrlqvlclg knnpsgkipl
      181 glfkckeled isladnrleg ilpkeignlt ilrslyldnn lfegnlsvsl lyfdalscgi
      241 ssripeeign wnpnnklryl alnenqlegi lslslincse lvlldvannn lsdtfphwlg
      301 mfpkllqmvd lshndftgll pteffqnlka lkeelefkik elidlldnrf hgeipkavge
      361 lrllhalsls sncltcsipl sfgnlkeles ldlsfnklsg ripselknlt flevlrfsnn
      421 nlvgpipsgk qfdtfeddsy lgnlalcglp lpkecnndei peaaqdekgh gngiafilkl
      481 ammrcgkrhg ggrrcgkrhg ggrryggv
//
LOCUS       XP_040942246             150 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_040942246
VERSION     XP_040942246.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086312.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=16870
     Region          <1..73
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          4..27
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..150
                     /gene="LOC121213530"
                     /coded_by="XM_041086312.1:1..453"
                     /db_xref="GeneID:121213530"
ORIGIN      
        1 maalesldls snklggrips eltkltflev lnlsqnnffg pipvghqfnt fdidsyagnl
       61 glcgfplskk cgseeerkpp tpklvededs aipfiwelvm mgygcgvvlg lstgyivftt
      121 grpwwlvrmv erdwqrnftr warrigrkrn
//
LOCUS       XP_040942247             117 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC1 [Gossypium hirsutum].
ACCESSION   XP_040942247
VERSION     XP_040942247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086313.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="receptor-like protein 9DC1"
                     /calculated_mol_wt=12680
     Region          41..88
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     CDS             1..117
                     /gene="LOC121213531"
                     /coded_by="XM_041086313.1:1..354"
                     /db_xref="GeneID:121213531"
ORIGIN      
        1 mgkfiwlcqi rsllfvlffl svvdcslsls ssslnptpsg laedtsallq fkntmsidds
       61 aifsycypkt nswnestncc swegvicdka tgqvisldls csklvgslsp nttlfrl
//
LOCUS       XP_040942248             719 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 26-like [Gossypium hirsutum].
ACCESSION   XP_040942248
VERSION     XP_040942248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086314.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..719
                     /product="receptor like protein 26-like"
                     /calculated_mol_wt=80964
     Region          14..>707
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          16..39
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          40..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          63..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          294..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          391..412
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..524
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          525..548
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          549..572
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          573..596
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..719
                     /gene="LOC121213532"
                     /coded_by="XM_041086314.1:1..2160"
                     /db_xref="GeneID:121213532"
ORIGIN      
        1 msdvvptsfk nlrsslkrls lefcdlqgdf pseifqlgyl eyvdlrwnsl tgylpnsnws
       61 splkffdlss nyfggsipss lenltkityl gfsynklegq ipdvfgnlnk lttldfsdcp
      121 inqiqrpnsi qrvyladndi hgeiptsffg lsrltqldls snnlsgvirs dmlsklesle
      181 tldlstnnfs gvinldvpsk lknltevnls nnklrqfpsf lrsakslrsl dlsnnkiqgs
      241 ifkwesegwe qlidfnlsnn sltsleqlpg knilsldlrs nrlqgplpat ppslqeflis
      301 dnkltgeipp sicnltsldi ldlsknyfgg iipsclgnfs rgisvinlqk nnlsgkipdf
      361 cvelnslttl alndnkfegl lprsfvnctv lrflnlannt lydlfprwls vlpvlqvlil
      421 rsnrfygrld hpmatssfls lqildlskne ftgpfpkiff qsfrrlklva asqpqqmskc
      481 grvgvscfps prdrydspen ykkyvkltmk rleieldldk sltnftlidf snnrfsgrip
      541 ealgelhall vlnlshnrln dtlppslanm aalesldlss nklggripse ltkltflevl
      601 nlsqnnffgp ipvghqfntf didsyagnlg lcgfplskkc gseeerkppt pklvededsa
      661 ipfiwelvmm gygcgvvlgl stgyivfttg rpwwlvrmve rdwqrnftrw arrigrkrn
//
LOCUS       XP_040942249            1392 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein Cf-9 [Gossypium hirsutum].
ACCESSION   XP_040942249
VERSION     XP_040942249.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086315.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1392
                     /product="receptor-like protein Cf-9"
                     /calculated_mol_wt=154055
     Region          41..88
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          97..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <107..>304
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..>945
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          378..401
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          402..426
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          427..450
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          451..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          504..527
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          528..549
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..574
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          575..598
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          599..622
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          623..670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          671..693
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          694..717
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          718..742
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          743..767
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          768..828
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          791..>1287
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          791..815
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          829..879
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          882..905
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          907..930
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1064..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1114..1197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1147..1192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1198..1221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1222..1245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1246..1269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1392
                     /gene="LOC107917200"
                     /coded_by="XM_041086315.1:1..4179"
                     /db_xref="GeneID:107917200"
ORIGIN      
        1 mgkfiwlcqi rslllvlffl svvgcclgls isslkptplc lpedasallq fkntmsidys
       61 sddsscypkt sywnestncc swkgvscdka tgqvigldls csllvgslsp ntslfrlqgl
      121 krfnlasndf ngssipsgfs qlvslihldl sdssfsgsvp sdislpakli sldlsqnnhl
      181 kfdshslaml trnlsklqnl flnsvnmfdv vptsfnnlps slkrlrlefc dlkgefpsei
      241 fqltylehvd lswnslsgyl pksnwsstlk yfklynnhfg gsipasignl tkitfldlsl
      301 nefevdccls lsssslnptp pclpedtsal lqfkntmsid dsafysycyp ktnswnestn
      361 ccswegvtcd katgqvisld lscsklvgfl spnttlfrlr glkqldlssn nfsassipsg
      421 fnqlvslthl dlsdsllsgs vpsdislpsk lisldlsgnd hlkldsqgfd mltrnlskle
      481 nlslnllnms dvvptaftnl psslkrlsle icdlqgdips eifllgyley vdlrgnsltg
      541 ylpksnwssp lkfldlsrny frvsipsslg nltkitylgf synklegkip dvfgnlnklt
      601 tldffdcyfs gqlppsmfnl tqltyldlsa nrlegplpth vtgfqnlkdf slidnlltgg
      661 vpswlftlps leylglsnns ltgpinqiqk pnsiqwvdla dndihgeips sffglsklth
      721 ldlssnnlsg virsdmlskl esletldlst nnfsgvinld vpsklknlte vnlsnnklrq
      781 fpsflrsaks lrsldlsknn iqgsifnwes egweqlidln lynnsltsle qlpgkniltl
      841 dlrsnqlqgp lpapppslqk flisdnkltg eippsicnlt sldildlskn yfggiipscl
      901 gnfsrgisii nlqknnlsgk ipdfcvelss lttlalndni leglllvqqq nqtdsatngl
      961 vpltgsssis isgtfwsgsa wsaasssets sgsclfqfqh dlssnttsll tdtllldeqn
     1021 rnssarssss cttwsswpac crvccmlnql hqllprsfvn ctvlrflnla nntlydlfpr
     1081 wlsvlpvlqv lilrsnrfyg rldhpmatss fislqildls kneftgpfpk iffqsfrrsk
     1141 lvaasqlqpq qvsncgrdag nvsclrsprg penyknyvkl tmkrleleld ldksltnftl
     1201 idfsnnrfng ripealgelh allvlnlshn rlndtlppsl anmaalesld lssnklggri
     1261 pseltkltfl evlnlsqnnf fgtipvghqf ntfdidsyag nlglygfpls kkcgseeerk
     1321 pptpklvede dsaipfiwel vmmgygcgvv lglstgyivf ttgrpwwlvr mverdwqrnf
     1381 trwarrigrk rn
//
LOCUS       XP_040942250             422 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein Cf-9 homolog [Gossypium hirsutum].
ACCESSION   XP_040942250
VERSION     XP_040942250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086316.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="receptor-like protein Cf-9 homolog"
                     /calculated_mol_wt=46875
     Region          17..>390
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          43..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          259..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          306..329
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          330..354
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..379
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..422
                     /gene="LOC121213533"
                     /coded_by="XM_041086316.1:1..1269"
                     /db_xref="GeneID:121213533"
ORIGIN      
        1 msidyssdds scypktsywn estnccswkg vncdkasgqv fgldlscsll vgslspntsp
       61 frlqglkrln lasndfnasp iqsgfipsdi slpaklisld lsqnnhlkfd shslamltrn
      121 lsklqnlfln svnmfdvvpt sfnnlpsslk rlrlefcdlk gefpseifql aylehvdlsw
      181 nsltgylpks nwsstlkyfk lynnhfggsi pasignltki tfldlslnef egqlpsilfi
      241 lkqlpsaslp thvtglqnln efflndnslt ggitswpftl pslkyldlsn nsltgpidki
      301 qkpnsvqevy laynhmhgei qssffnlanl ieldlssnnf sgliksdmll klknletlvl
      361 ssnnfngaik ldvlsklknl smlelshnkl lslssddgvn stfqnsrlyt sllamynnfr
      421 is
//
LOCUS       XP_040942251             497 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 19 [Gossypium hirsutum].
ACCESSION   XP_040942251
VERSION     XP_040942251.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086317.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="receptor-like protein 19"
                     /calculated_mol_wt=55710
     Region          34..56
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <41..>421
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          57..78
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          83..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          230..281
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          306..329
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..497
                     /gene="LOC107917199"
                     /coded_by="XM_041086317.1:1..1494"
                     /db_xref="GeneID:107917199"
ORIGIN      
        1 mslkqfpgen fhildlrsnl lqgpllaplp psleefwisn nnftgeippp icnltfpqil
       61 dlsknylggi ilkclgsssy gsriinlqkn ifkgkipdfc adynglinla lndnqlegpl
      121 prslinctfl kflnlannkl ndtfprwlga lpalqvlilr fnrfhgllni sgdirpsfss
      181 lqivdlsgne fngvlpttff qdlnslkhar nlselvqesd kegltplyal hfydqvsvnv
      241 twkksemele yirtlpifsa idfsnnrfsg kipeaigelr tlevlnlshn sftgnippsl
      301 gnlvelesld lssnnlsgei pfqmtkltfl evlnfshnnl vgpiphgnqf ntfendsyyg
      361 lcgfpltkqc gngegskppa pkrkeakgsp vafiwklvmm gygcgvvlgl stgylvfttg
      421 rpwwfftdkp ysfflsyvvv rdqedaalll yvlarnsmfl efifvssdlk kgfkvdledn
      481 lhsflfnlii rvfafvn
//
LOCUS       XP_016702090             191 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRICTOSIDINE SYNTHASE-LIKE 10 [Gossypium hirsutum].
ACCESSION   XP_016702090
VERSION     XP_016702090.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846601.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702090.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 75% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..191
                     /product="protein STRICTOSIDINE SYNTHASE-LIKE 10"
                     /calculated_mol_wt=21609
     Region          58..>185
                     /region_name="YvrE"
                     /note="Sugar lactone lactonase YvrE [Carbohydrate
                     transport and metabolism]; COG3386"
                     /db_xref="CDD:442613"
     Region          156..>183
                     /region_name="Str_synth"
                     /note="Strictosidine synthase; cl22863"
                     /db_xref="CDD:354965"
     CDS             1..191
                     /gene="LOC107917229"
                     /coded_by="XM_016846601.2:1..576"
                     /db_xref="GeneID:107917229"
ORIGIN      
        1 mkqshqrily qkhdvekide rflyqkhnvi iskayelinl ikvtglgsks iafdckvegp
       61 yvgvsdgril kwhgpklgwk efaipspvrk telcdgstnp nlepicgrpl vlkfnpvtyd
      121 lyiddayfgi lmigpnrgia qtlvssiegi pfkfingldi dsstgviyft dssitfqrky
      181 vfllnywncl i
//
LOCUS       XP_040942252             184 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Gossypium hirsutum].
ACCESSION   XP_040942252
VERSION     XP_040942252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086318.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="protein STRICTOSIDINE SYNTHASE-LIKE 10-like"
                     /calculated_mol_wt=20828
     Region          92..>116
                     /region_name="Str_synth"
                     /note="Strictosidine synthase; cl22863"
                     /db_xref="CDD:354965"
     CDS             1..184
                     /gene="LOC121213534"
                     /coded_by="XM_041086318.1:1..555"
                     /db_xref="GeneID:121213534"
ORIGIN      
        1 mdgwilkwhe pkigwkefav pssirkrelh dgstdpnlep iygrplglef npvtcdlytg
       61 dayfslliig lnggiaqtiv ssiegipfkf inrldidnrt gviyftdsst ifqrrhepee
      121 vseelaadqa epdqnvpemd iddepvrgtr plaeiyerah vaiaepsnfe eaeaqqewkq
      181 eeie
//
LOCUS       XP_016702091             261 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor kinase-like protein Xa21 [Gossypium hirsutum].
ACCESSION   XP_016702091
VERSION     XP_016702091.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846602.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="receptor kinase-like protein Xa21"
                     /calculated_mol_wt=29929
     Region          2..250
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..261
                     /gene="LOC107917230"
                     /coded_by="XM_016846602.1:1..786"
                     /db_xref="GeneID:107917230"
ORIGIN      
        1 mtialkvfhv nqdrasksfd iecevlrnir hrnlvkiins csnvefkalv lefmpngsle
       61 kwlysqnhfl nvlqrlnivi dialaveylh hdhslsvvhc dikpnnilld tdmvahlgds
      121 giakllgeed smiqtktrat igyiiwirrd cfyksdvysf gilvmetftr kkqtddmfge
      181 emslkrwvke slpsslvdvv dtkllntrer eglaakdckl filqlalecs aevaeeridm
      241 eevvarlkki ktkylhgteq v
//
LOCUS       XP_040942253             275 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 79B2 [Gossypium hirsutum].
ACCESSION   XP_040942253
VERSION     XP_040942253.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086319.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..275
                     /product="UDP-glycosyltransferase 79B2"
                     /calculated_mol_wt=30770
     Region          <10..272
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     CDS             1..275
                     /gene="LOC107939185"
                     /coded_by="XM_041086319.1:1..828"
                     /db_xref="GeneID:107939185"
ORIGIN      
        1 mtveevtklp pdypssivkf kaeeaavllf gaedfgsels fgerirtavs gsdaiafrtc
       61 rqtegpfcdy vargygkpvl lsgpcfletk tqqldekwkd efqelvlgfe lcglpflval
      121 kppqgfstve ealpegfqdr vggrglvygg wvpqeqllhh pnigcfvnhc gygtmwefll
      181 sdcqivlipe igdqilntrl mveeqkigve vergknrevs keslseaikf vmdkdnetan
      241 mmkrnhaklk qilsnrdlqe gyinnfiqal qdlvk
//
LOCUS       XP_016727948             454 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 79B6 [Gossypium hirsutum].
ACCESSION   XP_016727948
VERSION     XP_016727948.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872459.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727948.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..454
                     /product="UDP-glycosyltransferase 79B6"
                     /calculated_mol_wt=50943
     Region          8..451
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,165,168,175,179,206,272,348,350,352..353,
                     356)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,272,348,350,352..353)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..454
                     /gene="LOC107939177"
                     /coded_by="XM_016872459.2:1..1365"
                     /db_xref="GeneID:107939177"
ORIGIN      
        1 msksghsklh iamfpwvayg hfipflhlsn klahkghqis ffvpkgvqpk lenlnqypnl
       61 irffplhiph vdglppgaet tsvvpmnqqk ylafavdqtr dqvegilkvi kpemvfydfw
      121 fwipdlarql gilpifyvvv ssmsmglntk altkemtvee vmelppgypl stvklkpeea
      181 aamlfeaedf gsglsfreri rtavkgsdai afrtcseiee pfcdfvaegf gkpvllsgpc
      241 lpetntqqld eewvswlsqf qpgsvvfcsf gsqsvlqkde fqelvlgfel cglpflvalk
      301 ppqgfstvee alpegfqdrv ggrglvyggw vpqeqllhhp nigcfvnhcg ygtmweflls
      361 dcqivlipei gdqilntrlm vnelkigvev ergknrevsk eslseaikfv mdkdnetanm
      421 mkrnhaklkq ilsngdlqeg yinnfikalq dlvk
//
LOCUS       XP_040942254             415 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_040942254
VERSION     XP_040942254.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086320.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..415
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=46737
     Region          <2..151
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          236..372
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(240..243,278..280,283,317,343,370)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..415
                     /gene="LOC121213535"
                     /coded_by="XM_041086320.1:1..1248"
                     /db_xref="GeneID:121213535"
ORIGIN      
        1 meeifidqpe gfevqgeeek vyklkkalyg lkqaprawyd rmdtyltrlg ftkstseptl
       61 yvkkesnktl livslyvddl lvtgckreei etfkkqmqtv femtdlglmt yflgmevkqn
      121 eqgifisqka faskvlsrfc mtnckpastp valgekltsl gdedrvdekn yrsligclly
      181 ltatrpdimh avgllsrfmh cctvahfkaa krvlryvkgt lscgvkfera eelrlvgysd
      241 sdwagsvddm kstsgyfftl gssvfcwssk kqqtvaqsta eaeyiaaasa vnqaiwlrki
      301 lcdlnadpke atvikvdnqs avaiaknpvf hgktkhfkir yhfvreaems keislvhccs
      361 kdqladlltk plaasrfeyl kkkirvccfv akeeclkggn dssklknpck ltlha
//
LOCUS       XP_040942255             159 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ubiquitin-conjugating enzyme E2 38 [Gossypium hirsutum].
ACCESSION   XP_040942255
VERSION     XP_040942255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086321.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="putative ubiquitin-conjugating enzyme E2 38"
                     /calculated_mol_wt=17836
     Region          <1..88
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..159
                     /gene="LOC121213536"
                     /coded_by="XM_041086321.1:1..480"
                     /db_xref="GeneID:121213536"
ORIGIN      
        1 mlqvlvsiqa lilnqdpyfn epgwahhrgt pqgellsrqy nedtfilslk tmiysmrrpp
       61 khfedfvvgh fyrraqdilv ackaymdgaq vgclvkggvq dvdegdkscs qkfknsvsgc
      121 vnmlvkeftv lgvkdcekfl ivpkcqnnrv dsipkvpvl
//
LOCUS       XP_016743229             494 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743229
VERSION     XP_016743229.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887740.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016743229.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..494
                     /product="uncharacterized protein"
                     /calculated_mol_wt=54830
     Region          112..>494
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..494
                     /gene="LOC107952490"
                     /coded_by="XM_016887740.2:1..1485"
                     /db_xref="GeneID:107952490"
ORIGIN      
        1 matvpdscrr rrrcrarwpa kakktyfldl dplspdlask qpkikgkrpl chssigsvtg
       61 egvsdgekte rlpgdgraar rqrqvrmgrs errwqrsgfs vkpvasvlhs ysdhcfsivp
      121 epvpiseppg yefgsfgpsq sgfyysdgdf rvvssnitry tnsfsfytaa vsqtdkdgvf
      181 miegsfelqs pfvlqsllyg sgsskgsvst phipptvady tnpfilklhg fwyeslgelc
      241 mvgtgssylk egtlltpvav lklhniktss sitsfitgtl eslspsndsn yfepisillf
      301 pqlnykftfv sgdsadelsd gsdpeknlpv ydvlpgrsfc skftslvfrn vynlqytgcr
      361 snkkclprdg vianlpgsms lsavdcsdvl krvqilltfd dniklsrhek rfdpnttlig
      421 egiwddkknq lhvllcpfld ignswsnahv gdcttrlslr fpaiwsiket stimgqiwtn
      481 ktvddsgyfe kivf
//
LOCUS       XP_016742860             468 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016742860
VERSION     XP_016742860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887371.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53255
     Region          <1..448
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..468
                     /gene="LOC107952108"
                     /coded_by="XM_016887371.2:1..1407"
                     /db_xref="GeneID:107952108"
ORIGIN      
        1 mrfsisvkss kgrtgwgfad altvnnqlyk hthlmfaain ddferltrwe pqgrvnisyi
       61 idikwhtppk ltnegsasia ldekmeitae giydadtggl cmvgcrkvas idqfgnasmd
      121 cdiilnfqfa pvkgfknery irgrirsire ksdllyfhpl dvssvaysre qarhtiwtmd
      181 leiamvvisq tlvclfvrsq lyhskrqpnr lpftslvmlv iftlgqlipl vlnyealfhq
      241 kndqgtvlfq tggwlevnei ivritsmvaf llqlrilqqa flsrsnnrng kglwfaekmt
      301 llvtlplyly gafvvlladr gnyrcdtvll ptrpvdywqr stwddlksya glisdgfllp
      361 qilfnifsss renalspsfy igtslvrllp haydlycdhs yveykgtsiy anpakdffst
      421 awdvviligv lllaaiiylq qqfggccivp krfswrksye kipavgqs
//
LOCUS       XP_016743230             927 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743230
VERSION     XP_016743230.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887741.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016743230.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="uncharacterized protein"
                     /calculated_mol_wt=104925
     Region          43..900
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..927
                     /gene="LOC107952491"
                     /coded_by="XM_016887741.2:1..2784"
                     /db_xref="GeneID:107952491"
ORIGIN      
        1 mdcsifstss kllifctsll fiiffmclnv dsvtatesdy glhcdsvvhe skpvdeefni
       61 spfpgrqngy ysggdnvlnr ssdgyyygpa skvlvfethh vyttnaedvy kvegnlifet
      121 syyyersfsn greyyhsyss dsssrgalef dlhgfwsrtt gklcmvgsgy tyskegnvlh
      181 laavlkfnnv kissdintli tgtmdslnpa depnyfepis vlmfpqgsyk ytkvpkqfsq
      241 gcpggtdvpk ksslslsrti tvcdmfyrqt afeleyasgc dsskscspfg dgigylprfm
      301 hlrtiqcsdd klslrflief qddaytryya ssnfstslig egswdakqnr lciiacried
      361 assssleksh vgdcttrlsv rfpailsirn tstvvgeiws dkhknqsgff drimfrntdn
      421 nrgqfqlqgl kyeymetdkv nkscpkksrn rnntgeyldg ysqdmafsms ikyqkrsigw
      481 gsskplavgd qphqrfplli pssssrpksa gvesiasgsl lnisyemrie lnslkldhgl
      541 dpfnqssngy leirisaegv ydaetghlcm vgcrhlrsln estdcdilvn vhfppldsdr
      601 kgskikgsie strvktdhlh fetlefsgra yygswamesf wrmdfemims visntlaivf
      661 vvlqifhvrr hpavcpsvsf lmlvilalgh liplvlnlea mfnqdsertv warsgtwlem
      721 nevviravtm vaflmhfrll mlswaarcse eknealwiae krglyvclpv yiavglitgt
      781 arqhssyhie qtilgssray aglildaflf pqiifnmfln srepalsrff yigitlvrmv
      841 phgydlyrih nyvdmndsyi yadptadyys tawdiiipml glffaaiiyf qqrlsgrffl
      901 pkrfresvty dklpvdsedq splkssp
//
LOCUS       XP_040942256             384 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942256
VERSION     XP_040942256.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086322.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..384
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43395
     Region          <161..220
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(167..170,174..177)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..384
                     /gene="LOC121213537"
                     /coded_by="XM_041086322.1:1..1155"
                     /db_xref="GeneID:121213537"
ORIGIN      
        1 mkdfqqktea sirelttsia kltsqgklrs qtepnprqna navtlrsgkv lesipdrnla
       61 qesaqekpek deqvrpkppl pkiqppfper fnqcrrgked keiletfrnv einillldai
      121 kqipryakfl kelctnkrkl tgnervnvge nvsavlqrkm ptkcviiqla drsvvhpegv
      181 ledvlvkvne lifpvdfyvi kieedstpgs sdlllgrpfl stastkidvr sgtltmefdg
      241 eivkfnvyda ishqseilsv nridiidslv pelqlepagq arkldiqele eirndayena
      301 hiykdktklf hdkriaqknf sikqsenakk tvkqrlerie arletfgqql tkliaiicdr
      361 qgkyssllls fsavilviva gvaa
//
LOCUS       XP_016743232             188 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL65 [Gossypium hirsutum].
ACCESSION   XP_016743232
VERSION     XP_016743232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887743.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="RING-H2 finger protein ATL65"
                     /calculated_mol_wt=21445
     Region          132..175
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..188
                     /gene="LOC107952493"
                     /coded_by="XM_016887743.1:1..567"
                     /db_xref="GeneID:107952493"
ORIGIN      
        1 measppspdn nehtnvtydl qdfqtsifvc lvgillivlf iqiservvtw lrrevavdhl
       61 dlelvqiany qlensdwpde amalnnvwvm eifngfmvyl aerqisgltp efleqalpcv
      121 tykssgqttl decvicldgf eddemcrvfp vcehvfhfsc idnwlrnhlt cpicrncild
      181 svsmaltm
//
LOCUS       XP_016702039             621 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RUN1 [Gossypium hirsutum].
ACCESSION   XP_016702039
VERSION     XP_016702039.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846550.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702039.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..621
                     /product="disease resistance protein RUN1"
                     /calculated_mol_wt=71028
     Region          29..>620
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     CDS             1..621
                     /gene="LOC107917174"
                     /coded_by="XM_016846550.2:1..1866"
                     /db_xref="GeneID:107917174"
ORIGIN      
        1 mvrfdsetss ssssspslfs pssafrgkyd vflsfrgedt rqnftdhlya afkrrgiiaf
       61 rddekletge aiapelfkai heswcsviil segfektnre ssrskheknf ednkektqrw
      121 rsaltqvani kgwhisnrhe seligeiikr vstklcqtfa saptdmigie srleelhcki
      181 gigeeddsvq iigicgmggl gkttlarfvy aqisspfegk sfladvreva ekhglvylqk
      241 qllsqifpee sfnffnvhdg ndiisrmlsh kkifvviddv dniqhlkcli gkhgwfglgs
      301 riiittrdeh llqiygvddv ynptklnaee alrlfslkaf ksetpakqff elskrvveya
      361 nglplalevf gsflsgrsde aqwrsaterl kkesnkeild rlqisfdgle qsekdifidi
      421 acffkgedkd mvakildgcg ffadigidvl ikksliiide dnklsmhdll qemgkkivyq
      481 espnepgers rlweendtyn vlientlitl yfleaihhlp lviseqnktw tlsadaflkm
      541 krlrllrffn apnsrdinyl snelrllewh gypfksfpss fqpeklvall lpysciqklw
      601 kpdmqplhkl nwstsnalei l
//
LOCUS       XP_040942257             819 aa            linear   PLN 06-AUG-2024
DEFINITION  TMV resistance protein N [Gossypium hirsutum].
ACCESSION   XP_040942257
VERSION     XP_040942257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086323.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..819
                     /product="TMV resistance protein N"
                     /calculated_mol_wt=92621
     Region          30..>116
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     Region          <159..620
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          302..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..365
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          397..419
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          448..467
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          468..492
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          493..515
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          593..751
                     /region_name="C-JID"
                     /note="C-JID domain; pfam20160"
                     /db_xref="CDD:466313"
     CDS             1..819
                     /gene="LOC107917177"
                     /coded_by="XM_041086323.1:1..2460"
                     /db_xref="GeneID:107917177"
ORIGIN      
        1 mvrfdnetss ssssssssle ssssvsrgky dvflsfrged trrnftdhly dafkrrgitt
       61 frddekletg epiapelfkv iheswcsviv lpegycfsnw clqelseiiq qkndkgypvy
      121 ckarvgalds lgccmltmas tgvnsytylk qstwtlnada fltmnrlrll rffnvpnsrd
      181 fkylsnelrl lewhgypfks fpsgfqpenl velllpysri eklwkpnmal dklklvdlkg
      241 sknlvktpdf smapnlesli legtgivdfd ptvkflrrlk llnlrnckrl rifpskigng
      301 slqtlilsgc snidripeiv gemeclkelc ldrtgikelp ssigllrslm llnlkdcskl
      361 eslpssiggc eflktlllsg csklknfpes lrqlesleel nlietaittr psfifhlknl
      421 kflsfqgckg ppyrvrshwr fisrptprls mnsmtlklpv ilsglsslke lnlddcnlnd
      481 gaipndicsl ssleilrlsd nnfvtlpatl srlskltslv ltdckrlksl pelpasiklw
      541 idgcvsleav ansttafpsr vngyicafny fklaedndal vanarteryy iviprseipk
      601 wfssqtddss ksiikmqlps nflndtqflg fafscvffsd fnnkpqrgdh isyafvihgr
      661 nfsrgfersy fhlsgkstrv tkdhllihyl prngidlssl velecketev sgsstdmlke
      721 rfeievafei wgincmvkkc garivyeedl eemdqtiheh sgstssnfdd ihsnsgsngn
      781 nngalvkrkw lnakagdqrn ktlfsricqs yvvnhrlls
//
LOCUS       XP_016702042             400 aa            linear   PLN 06-AUG-2024
DEFINITION  TMV resistance protein N-like [Gossypium hirsutum].
ACCESSION   XP_016702042
VERSION     XP_016702042.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846553.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702042.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="TMV resistance protein N-like"
                     /calculated_mol_wt=45148
     Region          31..>399
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     CDS             1..400
                     /gene="LOC107917178"
                     /coded_by="XM_016846553.2:1..1203"
                     /db_xref="GeneID:107917178"
ORIGIN      
        1 mlkpsplktg geagekpdda mvlilnynrh eseligeiie kvstklcqtf asapndmigi
       61 esrleelnck icigeeddsv riigicgmgg lgkttlarsv ytkisshfeg qsfladvrev
      121 aekhglvclq kqllsqifpe esfnffnvhy gndiichmls hqkifvvidd vnniqhlkcl
      181 lgkrawfslg sriiittrde hllqiygvdd vynptklnak ealrifnlka fksetpamef
      241 felskrvvey anglplalev fgsflsgrsd evqwrsaier lknesnkeil drlqisfdgl
      301 eqlekdifld iacffkgedk dmvtkildgc gffpdvgidv likkslvtid ednklsmhdl
      361 llemgrkivy qespnepgkr srlweekgtn yvlientvtl
//
LOCUS       XP_040942258             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942258
VERSION     XP_040942258.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086324.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21337
     CDS             1..179
                     /gene="LOC121213539"
                     /coded_by="XM_041086324.1:1..540"
                     /db_xref="GeneID:121213539"
ORIGIN      
        1 mstkqreges lqdyvkrfht tnlntknled qwaidaflme vqndhvqysf tdnrlrslan
       61 lyqraykfvk pkeikkglfw pfhfprtrsk akntqtthqn sekerknkgt frflvtpdev
      121 fshlldqrnl rrrqlrhqrs qrramgraps pfwcnggskg aswpqdeapr rrasereer
//
LOCUS       XP_016702045             405 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RPV1-like [Gossypium hirsutum].
ACCESSION   XP_016702045
VERSION     XP_016702045.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846556.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702045.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="disease resistance protein RPV1-like"
                     /calculated_mol_wt=46231
     Region          28..>404
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     CDS             1..405
                     /gene="LOC107917181"
                     /coded_by="XM_016846556.2:1..1218"
                     /db_xref="GeneID:107917181"
ORIGIN      
        1 mpaggeagek pddaivliln ynrssknmal dtnfsrgkyd vflsfkgedt rrnftdhlya
       61 afkrrgittf rddeklktge piapelfkei heswcsvivl segycfsswc leelseiiqq
      121 kndkehnifp ifyyvdpsdl rkqtgkvlea fikhennfqd nkektqrwrp altqvanikg
      181 whlsnrhese ligeiiekvs tklcqtfasa pndmigiesr leelnckigi geeddsvrii
      241 gicgmgglgk ttlarsvytq isshfegqsf ladvrevaek hglvclqkql lsqifpeesf
      301 iffnvhdgnd iirhmlshkr ifvviddvdn iqhlkcllgk rawfglgsri iittrdehll
      361 qiygvddvyn ltklnakeal rlfslkafks etpaieffel skrvv
//
LOCUS       XP_040942259             559 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942259
VERSION     XP_040942259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086325.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..559
                     /product="uncharacterized protein"
                     /calculated_mol_wt=62597
     Region          382..463
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(385,387,389,415..417,456)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            385..387
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            385
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(415..418,422..425)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..559
                     /gene="LOC107917183"
                     /coded_by="XM_041086325.1:1..1680"
                     /db_xref="GeneID:107917183"
ORIGIN      
        1 mapdritlqn mekkpsesfr elyrnsfdah vvspfylkpl qppypkwyda naqcdyhagl
       61 tghsienctt fkklveklig mgvvkfddst kvenplpnht dggvnmvgee rrikaditdv
      121 ktplrwvwke mecmgfrali qgmmdnreve fcegvqeesy vcaselalgv pnanrpvvii
      181 srpqnseiga ritpkviiqk pivfaykdnr rvpwnydcnv tipgkedvin keeqdkgrhy
      241 eqmkarvepi ggetsvekkk nvvepellvn epikeeeare flkfikhsey svveqlhkqp
      301 arisvlalll nseghrnall kvlnetyvad disinkldrl vgnisadnfi sfsddeippg
      361 gmgstralhi tarckgcilp gvlvdngsal nvlllstlnr lpvdsshmks cqnvvrafdg
      421 terrvmgrid ipllidptiy evdflvmdik psyscllgkp wihsagrvvt idaeediias
      481 vtndapylet sddaiecsfr slefvnatfi regnkipmpr ismttemglq ltagkgalpr
      541 kglgkylqgr veapvlkdk
//
LOCUS       XP_016702049             276 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702049
VERSION     XP_016702049.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846560.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702049.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..276
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31912
     Region          <1..76
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..276
                     /gene="LOC107917184"
                     /coded_by="XM_016846560.2:1..831"
                     /db_xref="GeneID:107917184"
ORIGIN      
        1 mgiratierg ikvlevygds afviyqlrge wetrdpklis yrklvlelik efedttfcyl
       61 pqdenqmada latlasmikv nghgdmkpiq msiyedpayc ynieegeidd spwyqdilry
      121 vknreypgqa tenekrtlrr latdyvldge ilyrrgkdqv llrcvdtvea nkildevheg
      181 icemhasgft marqimrfgt stgatpfslv ygmeavlpie veipslrvlt elqldeaewv
      241 qsrydqlnli egnrlkaiqy gqmyqkrmmr aynkkv
//
LOCUS       XP_016702051             314 aa            linear   PLN 06-AUG-2024
DEFINITION  puff II/9-2 protein-like [Gossypium hirsutum].
ACCESSION   XP_016702051
VERSION     XP_016702051.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846562.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="puff II/9-2 protein-like"
                     /calculated_mol_wt=36684
     Region          <76..>306
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..314
                     /gene="LOC107917186"
                     /coded_by="XM_016846562.1:1..945"
                     /db_xref="GeneID:107917186"
ORIGIN      
        1 msnawkqihr mkkitvgatt tpeyhgwrie rindnipksr edygrsieeh lrvvpselei
       61 ikqdfekrss eygkmieqle eekmrlgldv dihkmeaerl rkgknkaeed ldslktdykk
      121 lrlsmrtagl gktseqwrqe ikeektkaeq lekkfqdaqa rksaleqsls ecqneearlk
      181 drvaelersl hlcrsrnsvi elkaslsrie elkerieele dalqnselrv ellerrneqc
      241 qkqihhsqnq irdrdhimge aitqirevad hlqslavqad ilslkyeses slgrelawll
      301 rgvkalgika ksym
//
LOCUS       XP_016702053             199 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-4-like [Gossypium hirsutum].
ACCESSION   XP_016702053
VERSION     XP_016702053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846564.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="importin subunit alpha-4-like"
                     /calculated_mol_wt=22002
     Region          <6..197
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          71..110
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..199
                     /gene="LOC107917188"
                     /coded_by="XM_016846564.1:1..600"
                     /db_xref="GeneID:107917188"
ORIGIN      
        1 mqilsdgkiv ehvlrtvgni fkgvdsqiqi linngvffrl nailmhgsns svlrktcsai
       61 stltardrnq iqkimdahii psllylsqad nydvevrwda acalsnaarr gsneqirflv
      121 nqgcigplcd hilcpdrkts ipclkglksi lkageimyst rnlytlvitd fdgfgkiekl
      181 qsdpdigema mkllmkygv
//
LOCUS       XP_016702055             147 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702055
VERSION     XP_016702055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846566.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16560
     Region          5..112
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     CDS             1..147
                     /gene="LOC107917190"
                     /coded_by="XM_016846566.1:1..444"
                     /db_xref="GeneID:107917190"
ORIGIN      
        1 msklkvavag vmrgpsrgwl vgfrmitsms difnievkav leglklawdr gfrqievesd
       61 nsflinvlqn dlavvsside irlildwysk dwqvkfryiq rdsnkvvdql akmdrgrvnc
      121 lvihedpphs vncerfaggg yssinng
//
LOCUS       XP_040942261             243 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942261
VERSION     XP_040942261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086327.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27545
     Region          <26..82
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          142..236
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..243
                     /gene="LOC121213540"
                     /coded_by="XM_041086327.1:1..732"
                     /db_xref="GeneID:121213540"
ORIGIN      
        1 mrldivlkik eevqkqydag flqevkeiev yvddmiaksk medehvqvlr klflrlrkfq
       61 lklnpakctf garlgkllgf ivsekgieid pdkvkavkgs aiadflasra ledykplsfd
      121 fpnedlmcia ateenpqegh gwrlnfdgas navgngigav lvslnaieqr ikvlevygds
      181 alviyqlkge wetrdpklis yrklvlelik efeditfyyl prdenqmada lvtlasmikv
      241 nrq
//
LOCUS       XP_016702058             301 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAINTENANCE OF MERISTEMS-like [Gossypium hirsutum].
ACCESSION   XP_016702058
VERSION     XP_016702058.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846569.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702058.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..301
                     /product="protein MAINTENANCE OF MERISTEMS-like"
                     /calculated_mol_wt=33595
     Region          23..282
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..301
                     /gene="LOC107917194"
                     /coded_by="XM_016846569.2:1..906"
                     /db_xref="GeneID:107917194"
ORIGIN      
        1 mpylelagfg svtqirytvl rfdllsalvk rwrpethtfh fpcgkctvtl edvalqlglp
       61 idgspvtgls aftdpdalfy qllgdspgdg esyfsgvqft wlkakygqls ttategelmc
      121 aarayimhii ggeimpdasn dkvhlmylpl ladlstvssy swgsavlavl yrelcratds
      181 kvrdiggcls llqswalyrm pflaswsgrl gigqsynvpl yrlmieqyar dgfiwtpyrt
      241 leitavvpss ayvhsyiwct napiinfnmv ewyygdrvlr qfacevgevh gknkrgklvi
      301 d
//
LOCUS       XP_040942262             504 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase 1,
            partial [Gossypium hirsutum].
ACCESSION   XP_040942262
VERSION     XP_040942262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086328.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         <1..504
                     /product="LOW QUALITY PROTEIN: tRNA
                     (guanine(37)-N1)-methyltransferase 1"
     Region          215..486
                     /region_name="Trm5"
                     /note="tRNA G37 N-methylase Trm5 [Translation, ribosomal
                     structure and biogenesis]; COG2520"
                     /db_xref="CDD:442010"
     CDS             1..504
                     /gene="LOC107917196"
                     /coded_by="XM_041086328.1:<1..1515"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:107917196"
ORIGIN      
        1 fdeqkftrvf xlaalrvpan dcfalenglr ghllnwprvk niarvpxdei eeeimtffdk
       61 rkdgeennee eneefeslvl yreklakefn yrgfvkfknl akisrpgkrk kkkkngdget
      121 kgnerkeccl vevleeeeed emkgllgeef kggrkwkgst rllllderyg dkgfeelpqa
      181 ikavfvgeti enrsstielv rckltlfydy wqmneiletm lpegmiipsa fetvghiahl
      241 nlkdehlpyk nviakvvldk nkpkiqtvvn kidviqndyr tmqlevlagn hslvttvven
      301 glrfrvdlak vywnsrlate rlrllsgfnr ndvicdvfsg vgpiavsaak ivkrvyandl
      361 npfaveyler nsvlnklekk ikvfnmdgrr finamfssek ahsithvvmn lpndaaefld
      421 afrgvyrnqp rdkefnfpmi hvygfskard pefdfherir ialqevavnv dmrrvrlvap
      481 gkymlcasfi lpksvafaec slnv
//
LOCUS       XP_040942264             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942264
VERSION     XP_040942264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086330.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24968
     Region          <1..80
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..223
                     /gene="LOC121213542"
                     /coded_by="XM_041086330.1:1..672"
                     /db_xref="GeneID:121213542"
ORIGIN      
        1 mkeeetvkwy sdriiavvnn irllgnqfse artvekvist lperyeakis sledsrdltn
       61 isltelinvv yaqeqrrasr qekyqecklk qgqpqqprak aqvaeqaakg katkgwlids
      121 dctnhmtpda aifksidrnf ktrvkvgiee egkgevlidt stgnklvsnv lsvpeidrnl
      181 lsiaqllekg ysvvfkgkec lisdpsgykl mliimadksf vvd
//
LOCUS       XP_016743105             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743105
VERSION     XP_016743105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887616.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23455
     Region          <27..114
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(27,29,31,56..58)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            27..29
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            27
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(56..59,63..66)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..211
                     /gene="LOC107952357"
                     /coded_by="XM_016887616.1:1..636"
                     /db_xref="GeneID:107952357"
ORIGIN      
        1 mqapgnntaq pprvvhqppr grgqvrdigs thsyiaytvs enlgiliest tsevtvltpl
       61 gqsirvnklf rdvplevqga ifladlmelp fgefdltpns evvviverrn ylsnvistlr
      121 deklvrkgre aylaytsvsd frdasvkdir takefqdifp kelpelapnr evefgielil
      181 garsagmevh vrlrqeagar egqeqrlkve g
//
LOCUS       XP_016742397             848 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance RPP13-like protein 4 [Gossypium hirsutum].
ACCESSION   XP_016742397
VERSION     XP_016742397.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886908.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742397.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..848
                     /product="disease resistance RPP13-like protein 4"
                     /calculated_mol_wt=97464
     Region          2..120
                     /region_name="RX-CC_like"
                     /note="Coiled-coil domain of the potato virux X resistance
                     protein and similar proteins; cd14798"
                     /db_xref="CDD:271353"
     Site            order(68,72,75,97,100..102,104..106,108..109)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          150..>837
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          163..407
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          562..589
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          590..613
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          614..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          638..661
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          690..713
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          714..744
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..848
                     /gene="LOC107951773"
                     /coded_by="XM_016886908.2:318..2864"
                     /db_xref="GeneID:107951773"
ORIGIN      
        1 madaiiqvva gklidalkeh sgrvlefrsq fmelktqldf mksfladank lkrkeetvkt
       61 tlsmirelty daediltdcl lraefrdhvf rcnhflprem ifqhrtskrl kdingriekm
      121 hkvlktylkt igqqgvhddv ssvvhrrwts pafdessivg laedtmkiig wilptkkqlh
      181 qvgiigmggl gkttitqkif nnhailerfe eriwvsisqt vneeetmktm lkqlgedtyg
      241 ldmgqmlpki kqalegkdyl ivmddvwsvh gwwerllagl pkregqssav iittrkesva
      301 iemgvekari hqprvlneee swalfcriaf ssekeakphy eleelgkdiv kkccglplai
      361 ktvggllksk tlsidvwrri hnnfhdelat regessvmas lqlsydelpt rlkqcllcfs
      421 iypedsvisa eqlvhwwvge gfvqgkdsrt aielafdyls elisrclvev vkhrgfdgrv
      481 ytckmhdlvr dltikiaree sfcsfdehgk qrpsiqsrrl gftgeedvks lnkksklraf
      541 lmmnsspvsh dktiplfrvr slrvldfsln klenipihkl lhwiislqrl sylnlrgvas
      601 lkelpqlige lrnlqllvln gcnnlqklps sitnlqklnv ldlgycpmmr ylpqglgrls
      661 nlqelsgftv pseadrngcr lgelqwlskl kvlrvninee sdiaeeeltv lshlkqlkvl
      721 sintegceke etfrkldgls ppphleelyl ryyrgvttpm wmnpkslrdl hylciengdl
      781 qfvhpsfegg ktitwkvegl clkflarlqv ewdlvqsvmp riryvevshc ymlksfpcnt
      841 eklgvwrk
//
LOCUS       XP_016715378             371 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715378
VERSION     XP_016715378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859889.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43383
     Region          42..149
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..371
                     /gene="LOC107928633"
                     /coded_by="XM_016859889.1:1..1116"
                     /db_xref="GeneID:107928633"
ORIGIN      
        1 megcdyweav kedyevtplp nnptmnqikm hkdrttrkak akawlyalvs psifnrimvf
       61 glakdiwdyl kaeyqederi ksmkvlnlir eferlqmkef esikeysdkl idiankyeat
      121 ivslentkdl tqlrvvelis alqaqeqrrl mrcwrkpdvk crrcnlmghi erfckeprnq
      181 qqggthvaik eedghlfvvf yfssstlyes wlvdsgctnh mncnekifkd ldrslksrvr
      241 igngeylevk gkdtvaiesy dgtkmfsdvl fvpkidqnll svgkfiknrf nvmfeeekcl
      301 ifdssgnelf rikmqkksfs lnpleeeqvt skcqivktsd qmdlhaeqvr kqleatleaa
      361 ldekefiege y
//
LOCUS       XP_040942266             259 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942266
VERSION     XP_040942266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086332.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..259
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29630
     Region          14..138
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(19..22,52..54,57,81,121,135)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..259
                     /gene="LOC121213544"
                     /coded_by="XM_041086332.1:1..780"
                     /db_xref="GeneID:121213544"
ORIGIN      
        1 mcisegessk dqswkmsfdg asntlghgmg vvlvslegnr ypltarlnff ctnniaeyea
       61 cimglhaaik rkikilevqr dsalviyqir gdwevrdskl vkyhdliael vkefnevtfn
      121 yfpweenqla nalatlasii eeesngrpwf hdileyiknq kypeqanend krtlrrmaie
      181 fvldrdilyk rgkdqvllrc vdaiearkil devhegicgm hasgftmarq imrlsipvee
      241 gilgehctes mkkkafsft
//
LOCUS       XP_040942268             154 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein ROC2-like [Gossypium hirsutum].
ACCESSION   XP_040942268
VERSION     XP_040942268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086334.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..154
                     /product="homeobox-leucine zipper protein ROC2-like"
                     /calculated_mol_wt=17098
     CDS             1..154
                     /gene="LOC121213545"
                     /coded_by="XM_041086334.1:385..849"
                     /db_xref="GeneID:121213545"
ORIGIN      
        1 mdpgciimqw dllsnqrhvr elvyvsngen pgnrvsimqv nsspnkieil ylqesytdet
       61 gsyivyapmd imamskilng gnpkfvsilp sgfsimpdka pgqgdgavgs iltlafqsvd
      121 rlsnkeympr rrskslmlsy qqpllqsrml cyla
//
LOCUS       XP_040942269             161 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein ROC2-like [Gossypium hirsutum].
ACCESSION   XP_040942269
VERSION     XP_040942269.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086335.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..161
                     /product="homeobox-leucine zipper protein ROC2-like"
                     /calculated_mol_wt=18210
     CDS             1..161
                     /gene="LOC107917281"
                     /coded_by="XM_041086335.1:145..630"
                     /db_xref="GeneID:107917281"
ORIGIN      
        1 mevlfdflrh ertrnrwdll snqrhvrelv yvsngenpgn rvsimqvnss pnkieilylq
       61 esytdetgsy ivyapmdima mskilnggnp kfvsilpsgf simpdkapgq gdgavgsilt
      121 lafqsvdrls nkeymprrrs kslmlsyqqp llqsrmlcyl a
//
LOCUS       XP_016727348             196 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59250 [Gossypium hirsutum].
ACCESSION   XP_016727348
VERSION     XP_016727348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871859.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..196
                     /product="F-box/LRR-repeat protein At3g59250"
                     /calculated_mol_wt=22010
     Region          54..84
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          125..195
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..196
                     /gene="LOC107938631"
                     /coded_by="XM_016871859.1:1..591"
                     /db_xref="GeneID:107938631"
ORIGIN      
        1 mldtpnlayf kygnlviagh plenlksins afiqsafsnf rnyattlfrg isnvhslvlt
       61 ynslkicdyy reqssceyad llinvkwsss mdkgleills sspeleklac hqevlsklpe
      121 kvaycllskl kvmeilgfrn dkdviekaky ilknvgalqk ltirtlsnis kakklkisev
      181 llsspreskh cciliv
//
LOCUS       XP_016727350             193 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase nepenthesin-1 [Gossypium hirsutum].
ACCESSION   XP_016727350
VERSION     XP_016727350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871861.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="aspartic proteinase nepenthesin-1"
                     /calculated_mol_wt=21873
     Region          7..>177
                     /region_name="PLN03146"
                     /note="aspartyl protease family protein; Provisional"
                     /db_xref="CDD:178691"
     CDS             1..193
                     /gene="LOC107938632"
                     /coded_by="XM_016871861.1:1..582"
                     /db_xref="GeneID:107938632"
ORIGIN      
        1 maripvftia illffiasfq assatskptg lsmklirrdl lfpgnlttfq rirrlvqlsv
       61 raqnfdffps rnqsednvlv rlpigrvpes yayvvefkig sqfhpvkllm vtgssliwtq
      121 cepciqcypq kvpiydsrts tsysklpcth elcqgennrf rcynnecvyn iqygatsrcn
      181 sprtkgvasf eaf
//
LOCUS       XP_040942270             187 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59250 [Gossypium hirsutum].
ACCESSION   XP_040942270
VERSION     XP_040942270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086336.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..187
                     /product="F-box/LRR-repeat protein At3g59250"
                     /calculated_mol_wt=20952
     Region          110..154
                     /region_name="FBD"
                     /note="pfam08387"
                     /db_xref="CDD:462458"
     CDS             1..187
                     /gene="LOC121213546"
                     /coded_by="XM_041086336.1:1..564"
                     /db_xref="GeneID:121213546"
ORIGIN      
        1 midtpnlayf kyldsikary sienlqslvk adiylfktdy trqggattlf rgicnvpsli
       61 lwvtsleipc ydlcreysyi rggkgletll sslpalekle fsqevlcflp envpscllyk
      121 lkaikitnft dekhcigkak yflknggalq kltiltapdv svekqlkisn vllaspresk
      181 qlciliv
//
LOCUS       XP_040942271             490 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box/LRR-repeat protein At5g41840 [Gossypium hirsutum].
ACCESSION   XP_040942271
VERSION     XP_040942271.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086337.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="putative F-box/LRR-repeat protein At5g41840"
                     /calculated_mol_wt=56435
     Region          49..84
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(52,56,59..60,63..64,68,70..71,75..77,79)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          138..162
                     /region_name="LRR_2"
                     /note="Leucine Rich Repeat; pfam07723"
                     /db_xref="CDD:336782"
     Region          139..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          188..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          259..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          331..>359
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(334..335,337..339,342..343,346,357..359)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(334,338,341..342,345..346,350,352..353,357..359)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          410..432
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          432..457
                     /region_name="LRR_2"
                     /note="Leucine Rich Repeat; pfam07723"
                     /db_xref="CDD:336782"
     Region          433..458
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          459..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..490
                     /gene="LOC107938641"
                     /coded_by="XM_041086337.1:1..1473"
                     /db_xref="GeneID:107938641"
ORIGIN      
        1 melednldss rdgleqkieq meikcyrake ekakmieeln ltsdsvdrvs dlpdsilthi
       61 lsflptkeav gtsilstrwr ylfallsnld rvlffhntsv dkfrlkcgkt vdsrrvcgwi
      121 saalwrgvkh lpgiifpnlk tlhlrsvvff gddsvesliy sctsledmvi ekchmwnitn
      181 fnisyhllrr ltilysefiv fdfwliidap nlayfkyidh vvaryslenl qtlikadigi
      241 fnnsklllsc eplpvfatmm elklgelwss fkwahwetrl etllssspel eqldfdqefl
      301 sslpdkgnil ahringigmg kevnrkkadr isdlpdsilt hilsflstne aynttnvdkf
      361 rlkcrgmids nrfygwisaa vhrgvkhldl niyldkfitl pdvlftcrtl vslkvdkdfv
      421 ldvprgvvhl pnlntlhles vkflnddsik nllsgcsnle dmvlkqcyme niskfnishq
      481 llkrltidyl
//
LOCUS       XP_016721120             145 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016721120
VERSION     XP_016721120.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865631.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721120.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16487
     Region          20..126
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..145
                     /gene="LOC107933425"
                     /coded_by="XM_016865631.2:1..438"
                     /db_xref="GeneID:107933425"
ORIGIN      
        1 msfwdyylay leksqslhls rgivrnrnge wiigfnrlle scsvfeaelw gildglwili
       61 dqgcsvvaiq tdnlkvakai qerpigesnl tlirmihyll vqldhwsisy isrmdnqead
      121 tlvklahegr yslqvfetsl lgglg
//
LOCUS       XP_040942272             133 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942272
VERSION     XP_040942272.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086338.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14831
     CDS             1..133
                     /gene="LOC121213547"
                     /coded_by="XM_041086338.1:1..402"
                     /db_xref="GeneID:121213547"
ORIGIN      
        1 mksisrsfka eafhrylkpg alaqlrdski narsnklklf rldsipslsp sqtqiqisdf
       61 dqiprflski yggscclqrk kllapkslll vnfqassqsl esrendnnse srsnrngdnl
      121 linvlnndvv vah
//
LOCUS       XP_016707041             437 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase kinase 18 [Gossypium
            hirsutum].
ACCESSION   XP_016707041
VERSION     XP_016707041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851552.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..437
                     /product="mitogen-activated protein kinase kinase kinase
                     18"
                     /calculated_mol_wt=48561
     Region          2..261
                     /region_name="STKc_MAPKKK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Mitogen-Activated Protein Kinase Kinase Kinase; cd06606"
                     /db_xref="CDD:270783"
     Site            order(9..13,17,30,32,58,79..82,85..86,89,126,128..131,133,
                     142..143,146,164..167,169,196,205)
                     /site_type="active"
                     /db_xref="CDD:270783"
     Site            order(9..13,17,30,32,58,79..82,84..86,89,130..131,133,
                     142..144)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270783"
     Site            order(12..13,126,128..130,146,164..167,169,196,205)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270783"
     Site            order(142..151,164..169)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270783"
     CDS             1..437
                     /gene="LOC107921731"
                     /coded_by="XM_016851552.2:91..1404"
                     /db_xref="GeneID:107921731"
ORIGIN      
        1 mewirgpaig rgstatvsla tavpsgelfa vkstelchsm flqrenyvls klscphivky
       61 igydgtnetn nkptynlcme yvtggtlsee ikrvggrlge ervrlytqqi lqglsylhvn
      121 gvahcdiksq niligkegak iadlgcaklm gkdgenqgfd tsaisgtpaf mapevargee
      181 qgfeadiwal gctiiemstg nspwpelndp vsalykigfs gevpeipswf sekgkdflgk
      241 clkrdlkerw takellqhpf leesdtllke vkestmdspn tvldqgfwds fnvvespknl
      301 ipkeismnsp tdrikkllqs ilsppssnas nwtfsedwmt vrsdnitedd fssptvsfme
      361 sfeeqletet pildedffsa nsaentiyfs silafnsvtd dyfvsdnlnf etvneiscsi
      421 ipmiqphlfh irikspl
//
LOCUS       XP_016707040             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707040
VERSION     XP_016707040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851551.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19216
     Region          4..114
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     CDS             1..166
                     /gene="LOC107921730"
                     /coded_by="XM_016851551.1:1..501"
                     /db_xref="GeneID:107921730"
ORIGIN      
        1 mgngigavlv sldgdyypft nkldffctnn iveygtcits iratierkin vlevygdfal
       61 vvyqlkgelv mrdpklinyk rlvlelikef dditfyylsr yenqmtdala tlasmvkvnk
      121 qedvkpiqms iyeapthcyn iekeenddhs wnhdilhyvk nyeypg
//
LOCUS       XP_016707247             145 aa            linear   PLN 06-AUG-2024
DEFINITION  stigma-specific STIG1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707247
VERSION     XP_016707247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851758.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="stigma-specific STIG1-like protein 1"
                     /calculated_mol_wt=15948
     Region          20..145
                     /region_name="Stig1"
                     /note="Stigma-specific protein, Stig1; pfam04885"
                     /db_xref="CDD:461466"
     CDS             1..145
                     /gene="LOC107921962"
                     /coded_by="XM_016851758.2:1..438"
                     /db_xref="GeneID:107921962"
ORIGIN      
        1 mkftklvfvs vlivvivlst saasnldhqq dttdfndaim dsseyssaqg rwllqnkrtr
       61 rvtckkfpgi cdakgspgpq cckkkcvnil tdrhncgkcg kkckyneicc kgkcvnpsfn
      121 rkhcggcnnr csngefcvfg lcnya
//
LOCUS       XP_016707248             141 aa            linear   PLN 06-AUG-2024
DEFINITION  stigma-specific STIG1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707248
VERSION     XP_016707248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851759.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..141
                     /product="stigma-specific STIG1-like protein 1"
                     /calculated_mol_wt=15393
     Region          7..141
                     /region_name="Stig1"
                     /note="Stigma-specific protein, Stig1; pfam04885"
                     /db_xref="CDD:461466"
     CDS             1..141
                     /gene="LOC107921963"
                     /coded_by="XM_016851759.2:1..426"
                     /db_xref="GeneID:107921963"
ORIGIN      
        1 mkfrklvfvs vlaivlalsi saasddrkdd vndatiessd yssaqgrwll qtkrtrrvtc
       61 kkfpgicdak gspgpqcckk kcvniltdrq ncgkcgkkck yneicckgkc vnpsfnkkhc
      121 ggcnnrcgng eycvfglcny a
//
LOCUS       XP_016707036             336 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_016707036
VERSION     XP_016707036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851547.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=37266
     Region          <2..>247
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          18..41
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          42..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..91
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..336
                     /gene="LOC107921726"
                     /coded_by="XM_016851547.1:1..1011"
                     /db_xref="GeneID:107921726"
ORIGIN      
        1 mnrfqgtipd tfdkkcglnn infngneleg sippslvhcr nmqvldlgnn kikdtfprwl
       61 etlpemqvlv lrsnklhsfl pssmvnhsfp elrildlann dlagplpkgy venmkgmwnl
      121 deqgtssymg trnfsyhysv sltikgfeik lekiltifas idlsntmfvg eissfvgqhn
      181 slrgpnlshn sfsgqipesi gnltqlewld lssnklngqi phkladltfl aflnlsdnrl
      241 tgptpqgrqf ntfenasyhg niglcgfpls rgcnsdglsk maseissrqm plkslkssei
      301 mdlsnadmti kgvrnmslsa hghpfvfain isnmqf
//
LOCUS       XP_040942273             317 aa            linear   PLN 06-AUG-2024
DEFINITION  desmethyl-deoxy-podophyllotoxin synthase [Gossypium hirsutum].
ACCESSION   XP_040942273
VERSION     XP_040942273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086339.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="desmethyl-deoxy-podophyllotoxin synthase"
                     /calculated_mol_wt=35570
     Region          <1..304
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(20..21,112,115..116,120,183..185)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     Site            order(112..113,116..117,120..121,124,175,184,186,209,
                     246..248,252..256,259..260)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     CDS             1..317
                     /gene="LOC121213548"
                     /coded_by="XM_041086339.1:1..954"
                     /db_xref="GeneID:121213548"
ORIGIN      
        1 mafgskcsee ekfksiitkv aelstgltla dffpsikave visgirpkle klhgeadril
       61 eniisehker riegngsged ekdivdmlld lqqhgnldfp lssnniksvi ldmfaagset
      121 ssisvewams qllknpslme kataevrqvf ngkgyvdear fgelkflklv iketlrlhnp
      181 vpliprecre ncklggydip aktkvlinsw aiardsryws epesfnperf ldssldykgt
      241 dfqyipfgag rricpgitfg lanveqqlaq lvyhfdwklp ngmkcedldi tsgpgltirr
      301 khdlfvipvp yhpsplq
//
LOCUS       XP_040942274             283 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_040942274
VERSION     XP_040942274.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086340.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..283
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=32042
     Region          183..>278
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(185..188,223..225,228,276)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..283
                     /gene="LOC121213549"
                     /coded_by="XM_041086340.1:1..852"
                     /db_xref="GeneID:121213549"
ORIGIN      
        1 mfrelgtsfv skvrigngef ieakgkgktv ictesgnkti levlfvpdid qnllsvgqll
       61 ekgyflifeg ktcvikdsfg qelvtidmhd rsftldvnql eanahialad esyetlyrqv
      121 vgslqylclt rldlsfvink vsqymhqphd vhwttvkril ryvrgtidyg lllqessmsl
      181 trfcdadwas sledrkstfg fclylgdnlv gwmskkqsvv sqfnseagyw slanatsela
      241 wfrslldeig vklsgtpifg vimlalfpwl qiqyymlrls mln
//
LOCUS       XP_040942275             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942275
VERSION     XP_040942275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086341.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20969
     CDS             1..189
                     /gene="LOC121213550"
                     /coded_by="XM_041086341.1:436..1005"
                     /db_xref="GeneID:121213550"
ORIGIN      
        1 mprrkilrgs itrnepnste tnnteqqtai gssnvpitse dptevqteng gtrrgrgrtq
       61 lrelyeldpv ervkvgrnsf gqpvgsearl lagymgilar npnmlsinye swrempdsnk
      121 nqafdnikat pgrnrrlgnl svtsmqlvln drgrlvllqd engnfvqgft rhfstlmeah
      181 iaesiaisg
//
LOCUS       XP_040942276             159 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat extensin-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040942276
VERSION     XP_040942276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086342.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="leucine-rich repeat extensin-like protein 1"
                     /calculated_mol_wt=16885
     CDS             1..159
                     /gene="LOC121213551"
                     /coded_by="XM_041086342.1:1..480"
                     /db_xref="GeneID:121213551"
ORIGIN      
        1 mrpafvilva lwisafnldy mvfggedssa llpspslsgy psygappspq sfsgypsyga
       61 plspqsfsgy psygappppp ppssistyps yrappppsrp aqancppppv pvqccqypsh
      121 pnpneyyqpv vdrsptpysp vstfsivilc cfilalsmr
//
LOCUS       XP_040942277             422 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein, partial [Gossypium hirsutum].
ACCESSION   XP_040942277
VERSION     XP_040942277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086343.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         <1..422
                     /product="uncharacterized protein"
     Region          <19..240
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
     Region          303..>381
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     Region          <409..422
                     /region_name="uS7"
                     /note="Ribosomal protein S7; cl00313"
                     /db_xref="CDD:444827"
     Site            422
                     /site_type="other"
                     /note="S11 interface [polypeptide binding]"
                     /db_xref="CDD:271245"
     CDS             1..422
                     /gene="LOC121213552"
                     /coded_by="XM_041086343.1:<1..1269"
                     /db_xref="GeneID:121213552"
ORIGIN      
        1 faldssyikl nvsvsfvdlf vflfhlqqfg qpqwltikgh shfvkrvsem letkgcqfkl
       61 gcevqsvlpa dngttmvcgd gfqetyngci mavdaptalk llgnqatfee trvlgafqya
      121 tsdiflhrds tlmpqnksaw salnflnssk nnafltywln alqyigktse pffvtvnpdh
      181 tpkntllkws tghaipsvaa sksslelgqi qgkrgiwfcg ydfnqdelka gmdaahgilg
      241 khssvlhspk nmspsfmett arlfvtkffq qyismgcvtf leeggriftf kgnmekcplk
      301 tvlkvhnpqf ywrimkeadi gladayihgd fsfldetegl lnlfrilvan kensaasgsn
      361 krrtwwspal ltasissaky fvkhllrqnt itqarrnisr vvcaampsrk kdeiervaka
      421 nr
//
LOCUS       XP_016707030             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_016707030
VERSION     XP_016707030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851541.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=21363
     CDS             1..189
                     /gene="LOC107921719"
                     /coded_by="XM_016851541.1:1..570"
                     /db_xref="GeneID:107921719"
ORIGIN      
        1 maikvdvkna flsgdlqeei ymdpphwyfh sikcanfnvf cmakyasdll sraniidckt
       61 vptplepnvk lnllddipls nptlyrtlvg slvylimtrp diahavhmvg qfltsprssh
      121 flavlrilry vkgllfyslh ffahsslvla eyfgvdwaee pnnglmflsl ysndlvdggt
      181 kfiridfpn
//
LOCUS       XP_040942278             859 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_040942278
VERSION     XP_040942278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086344.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..859
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=94768
     Region          91..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          192..>783
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          204..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          347..370
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          395..419
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          420..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          491..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          515..538
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          539..562
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          563..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..610
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..636
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          637..674
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          675..698
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          699..722
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          723..746
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..859
                     /gene="LOC107921392"
                     /coded_by="XM_041086344.1:1..2580"
                     /db_xref="GeneID:107921392"
ORIGIN      
        1 mvgyhsptfn lllcfhfisv lcspsspthl cspnqsaalf qfkthfsinq taskdceysy
       61 pkakttswkk gtdcclwdge iqnffgrfps lthlnlfysw fsrpvpheis ylsnlvslhl
      121 sdrpitdlig fqapgpilkl eksavngivr nltkvreiyl dgidmssidp nsfvnlsysl
      181 aslslcrchl rgklpdnifk lpnieylsld enskltgqfp ksnwssplvi lsasmtslsg
      241 elpesfgdlk slaglallss nfsgsiptsl gnltqleflf lsynyfsgki pssltnlakl
      301 gllslrwnql egslpetpna fpnlgfldls nnllsgttps wlytiplvhl dlgnnqfigh
      361 isefqnrlls lnmlvlknns frgpipssis klvnlsfldl ssnklngtis sdmfselhsl
      421 qyldlssdtl slssnnsvty vlqgsknlsv ldfsnnrirg rlskfpwkdi eflnlrsnfi
      481 egdlpelppn irflsvsnns ltgtlsgicn akfieildls hndfsgvipq cigsfsqsls
      541 slnlkmnklh gaipstfakg calknlnlns nhlegplkps itnckdlqvl dvgnnminds
      601 fphwiealse lqvlvlrsnk fhgpitapts pqsllklqiv dlscnnffgp lptgyikdfk
      661 gminilddgk dltiftsidl ssnnfegqip rdigelsslr glnlshnnlv ghipsslrnm
      721 trlewldlss nqlsgqiptg lldltflssf nvsynqlvgp ipkgkqfntf engsyheneg
      781 lcgvplsrgc nnnvlgqppp apwmnsqedd gsklefgwka vaigygfgfi fgaaigcarl
      841 rtgkpkwlvt lfearrrrr
//
LOCUS       XP_016707028             436 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707028
VERSION     XP_016707028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851539.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..436
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48552
     Region          201..294
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(216,218,220,246..248,287)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            216..218
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            216
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(246..249,253..256)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..436
                     /gene="LOC107921715"
                     /coded_by="XM_016851539.1:1..1311"
                     /db_xref="GeneID:107921715"
ORIGIN      
        1 mdnkemmfye eaegkgniys selaakttkt nhplviiscp rsdgsrvqtt pkiviqkpsn
       61 fsykndkmvp wnygcnvtil ekraernqei gsytgngkry daqaessree nkkkeqkkgk
      121 aveveplvne pvkeeeakef lnskahrnal lkvlnetyia ddisvnkldr lannisadnl
      181 iffsddeips grrgstkaly vtarckgyil prilidngsa lnvlplstls rlpvdsshmk
      241 acqsivrafd gtekrvmgri evplrigpit yevgflvmei kssyncllgr pwihsagvvp
      301 sslhqkvkiv segrvitisa eediittvtg dapyveidde vvecsfrste mglqlmigrg
      361 aspgkglgky lqgkietpvl keksedieem lknihinaie tsekrallei cpyepgseln
      421 nwtaeeipvv frayse
//
LOCUS       XP_016707026             141 aa            linear   PLN 06-AUG-2024
DEFINITION  tropomyosin-like [Gossypium hirsutum].
ACCESSION   XP_016707026
VERSION     XP_016707026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851537.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..141
                     /product="tropomyosin-like"
                     /calculated_mol_wt=16840
     Region          46..>141
                     /region_name="PRK05771"
                     /note="V-type ATP synthase subunit I; Validated"
                     /db_xref="CDD:235600"
     CDS             1..141
                     /gene="LOC107921714"
                     /coded_by="XM_016851537.1:1..426"
                     /db_xref="GeneID:107921714"
ORIGIN      
        1 meehlravps eleiikqdfe rrnaelekkm eqmeeekmnl rldadvqkle aerlrkgktk
       61 agedldslkt dykklrllir tvglgktseq wreeireekn kvdswerrfq evqtrneilk
      121 kslsekqkek gelenrvtel e
//
LOCUS       XP_040942279             238 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942279
VERSION     XP_040942279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086345.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..238
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26537
     Region          208..>238
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     CDS             1..238
                     /gene="LOC121213553"
                     /coded_by="XM_041086345.1:1..717"
                     /db_xref="GeneID:121213553"
ORIGIN      
        1 matsnqgqra lgqdtnrida rqpalvyivr ghedrdasna ivgfshsyva caitdklgiw
       61 vekiandvtv vsplgqsviv sldyaikrvt mkmtegneii mvgerrnyls nmisailaek
      121 lvqkgceayl ayvldfsars vtvesirtvr efldvfpkel prlplnrevg feiklllrtt
      181 pvsialyhmt pkelkelkvq lqelldcgfi kpnvspygas vlfvknkdgs lrlcteyr
//
LOCUS       XP_040942280             275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942280
VERSION     XP_040942280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086346.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..275
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31418
     Region          1..>68
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Region          115..221
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     CDS             1..275
                     /gene="LOC107921735"
                     /coded_by="XM_041086346.1:1..828"
                     /db_xref="GeneID:107921735"
ORIGIN      
        1 mcvdyrdlnk aspkdnfplp hidtlvdnta gyslfsfidg fsgynqirmy pedmekitfi
       61 miwgtfcfqk tvkgsaiadf lasraledye qlnfdlpned lmcvataene frenvlvspd
      121 gehspftskl dfdctnnmve yeaciigirt aierkikvle vyedsalviy qlkgewkard
      181 sklinyrklv lelieefedi tlcylprden qladalatla smiknreypg qatenekrtl
      241 rrlandyvld geilyrrgak mrgccrgqan lgrgp
//
LOCUS       XP_016707044             377 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707044
VERSION     XP_016707044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851555.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43933
     CDS             1..377
                     /gene="LOC107921736"
                     /coded_by="XM_016851555.1:1..1134"
                     /db_xref="GeneID:107921736"
ORIGIN      
        1 mqlekgdsls kghiselwdf iyinvtqnnl relkeiwvqw edetkqlfyy nygdlpylld
       61 vkvdehlfra laqfwnsays cftfgevdlv ptieeytall rcpmiqvdkv yskavniptf
      121 vkklmnilam ihpdtkkrvn vfalsiygli ifpralgyid eavtdlfdql dkrvtpvpei
      181 laetfkslst crstgegrfi gcaqlllvlf hshfwevdkv sypvfsenys llkevaatpr
      241 rdnitmekwm aiiqnlkdgd vewkahwmvp eeilyrcgnf dwvpllgiwg avgyaallvl
      301 kqyrsrqfip atqglaqsef sykydgykks irevtnawkq ihrmkklavg pmvtseynew
      361 wnkrvndnip rlreeda
//
LOCUS       XP_040942281             171 aa            linear   PLN 06-AUG-2024
DEFINITION  heavy metal-associated isoprenylated plant protein 41-like
            [Gossypium hirsutum].
ACCESSION   XP_040942281
VERSION     XP_040942281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086347.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="heavy metal-associated isoprenylated plant
                     protein 41-like"
                     /calculated_mol_wt=19628
     Region          27..171
                     /region_name="BMT5-like"
                     /note="rRNA (uridine-N3-)-methyltransferase BTM5-like;
                     pfam10354"
                     /db_xref="CDD:463056"
     CDS             1..171
                     /gene="LOC121213556"
                     /coded_by="XM_041086347.1:1..516"
                     /db_xref="GeneID:121213556"
ORIGIN      
        1 misaengesy ekekwvshys snhqvmlvge gdfsfsefdi lvkkyknais nlenleklga
       61 cllhdvdatk mkhhtdlanr kfdriifnfp hagfhgkedn phmirmhrnl vqgffrsarg
      121 mlrangeihv nhktntpfsl wnpkklasgf slaliqrvdf nvedypgyhn k
//
LOCUS       XP_016707019             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707019
VERSION     XP_016707019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851530.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16742
     Region          61..88
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..142
                     /gene="LOC107921706"
                     /coded_by="XM_016851530.1:1..429"
                     /db_xref="GeneID:107921706"
ORIGIN      
        1 mearhvfveh vrdvmvanrr marsmnveiy srrlktfrvt etisrrpgip trsygvdlrn
       61 rrcgcrrfet lhypcahvma acakvnldve qyvddvytle ntlrvwenef pvlpnlstwe
      121 vppttfellp drrlrrnprg rp
//
LOCUS       XP_016707021             565 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO protein homolog 1 [Gossypium hirsutum].
ACCESSION   XP_016707021
VERSION     XP_016707021.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851532.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..565
                     /product="MLO protein homolog 1"
                     /calculated_mol_wt=64157
     Region          6..500
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..565
                     /gene="LOC107921708"
                     /coded_by="XM_016851532.1:21..1718"
                     /db_xref="GeneID:107921708"
ORIGIN      
        1 matpkersle etptwavavv caifviisil iehgihslgk wfqkrqkkam mealekikae
       61 lmllgfisll ltigtysipa icipekigyt mlpckrkpgy agdsgkdgnk gggggdedrr
      121 rkllsyaedm vwrrvlassk gkdscpkgkv alitqsgmhd lhififalav fhvlysvati
      181 llakakmkkw eswesetktl eyqyrndpsr frlthltsfv krhsgfstip gmrwivaffr
      241 qffgsvskvd yltmrngfin ahfaantkfd fhkyikrsme ddfkvvvgis tplwafaiif
      301 lllnvykwqt ltwlslvplt ilvlvgtkle liimemaeei qersavvrga pvvepnnkff
      361 wfnrprwilf lihytlfqna fqmayflwvv fkyslgscih ekpyfvvgrv vvglflqilc
      421 syitfplysl vtqmgshmkt aifeeqtaka lknwrkaakk rnkqkekggg gmsspmsvsm
      481 sgnttpsrgt splhflhnhk hrstasdqtd gvlnspthsn fsypsdtdls dieaaalspp
      541 qhltqldddd dhhhqhnidf sfdkp
//
LOCUS       XP_016707022             327 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707022
VERSION     XP_016707022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851533.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..327
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37666
     Region          74..130
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     CDS             1..327
                     /gene="LOC107921709"
                     /coded_by="XM_016851533.1:1..984"
                     /db_xref="GeneID:107921709"
ORIGIN      
        1 mtelrvtfar lslasagglc velqvrqtls qqikekqlld gdllkkirqv eqgvkgdidi
       61 naecilnfrg rlcvpqnvdl rqvilnevhs spypmhpgng kmyhdlrkiy wwaalkhdkw
      121 eriitdfiss fpltlsrkdl vrvivdrflk sahfvavrtn yslqklaely iveivrlhgv
      181 lvsiisnrdl rftssfqasi hmapfealyg kkcrnpfcwt kldekrvvgv dlvreteekv
      241 lrlgrkgkls pryvrpnevv ervgpvaypl klppevdqih dvfhvsmlqk ylsdslhivp
      301 veeievqpnl tfdeepieil dhemkvl
//
LOCUS       XP_016707023             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707023
VERSION     XP_016707023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851534.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..271
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31446
     Region          <102..211
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..271
                     /gene="LOC107921710"
                     /coded_by="XM_016851534.2:1..816"
                     /db_xref="GeneID:107921710"
ORIGIN      
        1 mtyrrywlik tngetsflpc kargsnlrvh skfgvtgrsr ssmnqrhfnf hlcpcllfey
       61 fnliyvlakg vvegsskkgk nitqgcakls vlyslnhcfv adrrvlrdai skrhglkvph
      121 gcyylvdagy tncerflaff rgqryhlnew rqgyqpstte effnmkhasa rnviercfgl
      181 lklrwgilrs psfypvrvhn riiiacclfh nfirtymsld pieaelgkgl tsnvidddel
      241 nivnihpsda watwrmelan qifdewqasr n
//
LOCUS       XP_016707024             290 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707024
VERSION     XP_016707024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851535.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33339
     CDS             1..290
                     /gene="LOC107921712"
                     /coded_by="XM_016851535.1:1..873"
                     /db_xref="GeneID:107921712"
ORIGIN      
        1 msnhtklefv alditrknyl swmldveihl dakglgeain egneassqdn akamiflchh
       61 lheglktesl nvkdplvlrn glkerydhqk tiilprahyd wlhlrlqdfk ftqyrekcfk
      121 kyfeliscll vaeqnnellm knhesrsigs tpfseanats yngkdkghts scgrghgrgr
      181 drgrgqgrgh ergghfrnth qkwdhkdekn dknttgkmks lcyhcegknh wsrtchtpkh
      241 lvelyqqslk dkgkkietnf vcengkydyg iigtthlkvv dffttpegnn
//
LOCUS       XP_016707025             229 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 4-like [Gossypium hirsutum].
ACCESSION   XP_016707025
VERSION     XP_016707025.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851536.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="FT-interacting protein 4-like"
                     /calculated_mol_wt=26774
     Region          113..>224
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..229
                     /gene="LOC107921713"
                     /coded_by="XM_016851536.2:1..690"
                     /db_xref="GeneID:107921713"
ORIGIN      
        1 mnpllpqmhh iyslsiyqld ilrkqavril csslslnelp lrqevveyml dggsqmwslr
       61 kakanfqrvl atfkcfsnar qwfdeirkwn nsvvivlvma iyciivfkpd lilptvtlys
      121 iqvmilywrk rprrpthidv nlsvvgsvta deldeefdtf pssrqfdvlq mrydrlrsiv
      181 grvvtvisdi atqverfhsl lnwrdpritm mflvcclvgs fmlyylisl
//
LOCUS       XP_016707018             188 aa            linear   PLN 06-AUG-2024
DEFINITION  stemmadenine O-acetyltransferase-like [Gossypium hirsutum].
ACCESSION   XP_016707018
VERSION     XP_016707018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851529.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="stemmadenine O-acetyltransferase-like"
                     /calculated_mol_wt=20709
     Region          <1..181
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..188
                     /gene="LOC107921705"
                     /coded_by="XM_016851529.1:1..567"
                     /db_xref="GeneID:107921705"
ORIGIN      
        1 mlnpfvkkgi wqsrrivfda saiaslkakt rsssvpyptw veavsallsk citaaskakp
       61 diqkstlity svnlrqrarp qipnysmgnf vclaaalvta keteldnlvc hlrkairkid
      121 idlitalqgd ggwlkycecm keigkashgt ndkiidlivf sswcnmgvye idfgwgkptw
      181 vacapkik
//
LOCUS       XP_016707016             338 aa            linear   PLN 06-AUG-2024
DEFINITION  acyltransferase Pun1 [Gossypium hirsutum].
ACCESSION   XP_016707016
VERSION     XP_016707016.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851527.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707016.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..338
                     /product="acyltransferase Pun1"
                     /calculated_mol_wt=37300
     Region          3..>338
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..338
                     /gene="LOC107921704"
                     /coded_by="XM_016851527.2:1..1017"
                     /db_xref="GeneID:107921704"
ORIGIN      
        1 mvmvveivsk efikptsptp phlrthrfsf ldqflpsiyv pmvlfymdqe rsipvaasns
       61 rrsqllkesl setltlfypl agrikdhlyi dcndegayyv earvnrplre llnltdspyv
      121 sqllpaeptw tattaggyia miqvttfacg giaigaflsh viadgpaatk fisswaaltr
      181 kcgeeapcpn fdaslvfpps vvypreatll alfsrfvkkg kwksrriifd asaiaamkak
      241 tvsssvpnpt rvevvsslls kcikatfkak sdiqkstlia hivnlrqrar pqipnhsmgn
      301 flclaaalvt aketeldnlv chlrkeirki dadlital
//
LOCUS       XP_016707014             278 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707014
VERSION     XP_016707014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851525.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..278
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31507
     Region          45..275
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..278
                     /gene="LOC107921701"
                     /coded_by="XM_016851525.2:1..837"
                     /db_xref="GeneID:107921701"
ORIGIN      
        1 maassghvrs sslpinthpl vvsveeqltr lrasqqetss smsnrlgglk elyhrvddlf
       61 qlqfpralci ehledaldgs lrvldacgti rdvlsrmreg lqglesslrr rtgrescleg
      121 eiraymvtrk emnkmirnlk gmdrkcksvv ldndsemvsv vnmlreaeei slsvfdslls
      181 flllpklrsk ptgwpilskl lhsrralcdr meateaekle velsllkssk dikleqvqkl
      241 lkdleafqat iketegdlec ifrqllktrv fllnilnh
//
LOCUS       XP_040942282             141 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942282
VERSION     XP_040942282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086348.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..141
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15645
     Region          1..>124
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..141
                     /gene="LOC107921700"
                     /coded_by="XM_041086348.1:1..426"
                     /db_xref="GeneID:107921700"
ORIGIN      
        1 mldgslklld tcssskdals qikgcvrdfe sslrrkirck sslvneisey fisrkqvnki
       61 vcncfgnmkr mqksnatlve rdndlvalas mlneveavsl tvfksllsfl yspkskpagk
      121 kesidvtvtq vqktlknlka f
//
LOCUS       XP_016707012             551 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707012
VERSION     XP_016707012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851523.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..551
                     /product="uncharacterized protein"
                     /calculated_mol_wt=63750
     Region          <1..42
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..199
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(80..83,113..115,118,142,182,196)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     Region          287..344
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     CDS             1..551
                     /gene="LOC107921699"
                     /coded_by="XM_016851523.1:1..1656"
                     /db_xref="GeneID:107921699"
ORIGIN      
        1 mespalsrrm drwqilltey divyvsqksi kgsaiadfla srtteeyehl rfdfpdedlm
       61 cisekegess kgkswkmsfd gasnafghgi gavlvspegd hypltaildf fctnniaeye
      121 acimglraai krkikilevh gdsalviyqi rgdwevrdpk lvkyhdlvak lvkefkevtf
      181 kyfpreenql adalatlasm fkanreteim piqmsiyetp ahcfsieees derpwfhdfl
      241 eyiknqrype qanendkrti krmairfald gdilykrgkd qmllrcvdav esrkileevh
      301 egicgthasg ftmarqimrl gyywltmerd cigyirkchk cqiygdkiha apsplhikhh
      361 nsspyrpkmn gvvevankni kriigkmnet ykdwheklpf alyayrtsvr tstgathfsl
      421 vygmeavlpi eveisslrvl metkleesew myqkrmitah dkkvrprefr egeldenpkg
      481 rpnkvgsglk eqsdlngeln devaifeafs earnllyrsr arkdpgrrnv ekfmhwisgt
      541 flaiefaffs l
//
LOCUS       XP_016707011             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707011
VERSION     XP_016707011.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851522.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19750
     Region          61..>80
                     /region_name="SWIM"
                     /note="SWIM zinc finger; cl45927"
                     /db_xref="CDD:459272"
     CDS             1..171
                     /gene="LOC107921698"
                     /coded_by="XM_016851522.1:1..516"
                     /db_xref="GeneID:107921698"
ORIGIN      
        1 mkaghvfved vkdtmvanrr mamsmnvevy srhletcrvt ktinrrpgip prsygvdlrn
       61 rrcdcrrfqt lhypcvhvva ssakvllnve qfiddvytle htlrvwenkf pvlpdlstwe
      121 vpsttfklvp dkglrrnpkg hpqssiihne idireksdsk hcelcrlach n
//
LOCUS       XP_016729547             525 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729547
VERSION     XP_016729547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874058.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..525
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58323
     Region          332..413
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(335,337,339,365..367,406)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            335..337
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            335
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(365..368,372..375)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..525
                     /gene="LOC107940627"
                     /coded_by="XM_016874058.1:1..1578"
                     /db_xref="GeneID:107940627"
ORIGIN      
        1 mgvvkfdeat ktenplpnht eneinmmgey rkikadiadv ktplrcvwke mvkrglitse
       61 escekrrnyc efhceighei qectkfravv qgmmdnkdme fcegiqkenh vctselalgv
      121 skanhpvvii srpknsevga rvapkviiqk ptvftykdnr rvpwnyncnv tipgkedain
      181 kedhgeeghd eqvkariepi keetligkke kavkpellvn epikeeeare flkfikhsen
      241 nvveqlhkqp arisvlalll nseghrnall kvlnetyvan disvnkldrl vdnisadnfi
      301 sfsddeippg gmgstralhi tvrckgcilp gvlvdngsal nvlplstlnr lpvdsshmkt
      361 cqnmvrafdg tergvmgrig iplligptiy evdflvmdik psyscllgrp wihsagavps
      421 slhqklklvs egrvvtidve ediiasvtnd apyletsdda ikcsfrslef inatficegn
      481 kiptpristt temglqltvg kgalpgkglg rylqgrvkvp vlkgk
//
LOCUS       XP_040942284             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942284
VERSION     XP_040942284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086350.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49152
     Region          <289..397
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..421
                     /gene="LOC107940626"
                     /coded_by="XM_041086350.1:1..1266"
                     /db_xref="GeneID:107940626"
ORIGIN      
        1 mkpiqmsiye apaqcyniee gekddspwyq dilryvknre ypdqsekiqh ekgdslavgy
       61 vselwdftrv svaqnnlqel keiwdqwdne vrqlfylnyg dlsylldmkv dkrlfralaq
      121 fwnpayscft fgkvdlvpti eectallrcs kvqvdriysk vvniptflkk linitgmseq
      181 wvtarikqkg dsrcipwksl kdlilahpda rkkvdvfals iyglilfpki lghvdeavtd
      241 lfdrlnkgvt pvpadkvsyq vfsesysplk eivatsrrdd iteekwmaif qnlqeediew
      301 ralwllpdei lyrcgdfdwv pllgiwgavg yapllvlrqy rsrqfvpatq alaecefsyk
      361 ddgykrkare manawnqtrr mkrlavgpmt tskynewrvr rindnipgle idrgafarrp
      421 f
//
LOCUS       XP_040942285             381 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942285
VERSION     XP_040942285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086351.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 44% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43312
     Region          <186..318
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..381
                     /gene="LOC121213558"
                     /coded_by="XM_041086351.1:1..1146"
                     /db_xref="GeneID:121213558"
ORIGIN      
        1 mkvkamldsh yfsglailel yvhfvnidag gpkssmgrls snfnhqfqlw siicaavkes
       61 eqdglkialf sepksiltep kesdfddegp nnaggtyldf tlyaplfhmh nvdlhaevlc
      121 hprlpspivp ssnkwlrkdg ryvgvvvdig tpygtgdggg atntpvegfn iwwnhpasyr
      181 gipteledir llleqrseae fqwtpyedla vrtvipeefl qnpnawhvkv vlinyatvep
      241 hqtdrvlrqf gcrqpipadp eefdehhkid lqllgtdwpl ywsvytemwe nrneylptre
      301 piivlelacv peympwfrah gkpylltpee rrrqirvgre rrgpqnprgq nykgspstrp
      361 rhspgsssat mqspsptkvp t
//
LOCUS       XP_040942286             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942286
VERSION     XP_040942286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086352.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18507
     Region          47..70
                     /region_name="SWIM"
                     /note="SWIM zinc finger; cl45927"
                     /db_xref="CDD:459272"
     CDS             1..156
                     /gene="LOC121213559"
                     /coded_by="XM_041086352.1:1..471"
                     /db_xref="GeneID:121213559"
ORIGIN      
        1 mvvnrqlars mnveiysrrl etfrvtenig rrprsygvdl rnrwyecrkf etlhypcahv
       61 vavcarvnld aeqyvddvyt lkrtlrvwen efpvlpdlst wevlpitfel lpdrglrrnp
      121 rgrpqssrir nemdireksd ekrcgicrls ghsrnk
//
LOCUS       XP_040942287             191 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942287
VERSION     XP_040942287.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..191
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22084
     Region          54..86
                     /region_name="SWIM"
                     /note="SWIM zinc finger; pfam04434"
                     /db_xref="CDD:309540"
     CDS             1..191
                     /gene="LOC121213560"
                     /coded_by="XM_041086353.1:1..576"
                     /db_xref="GeneID:121213560"
ORIGIN      
        1 mvaghvfveh vrdamvanrq larsinvkiy srrletfrvt ktisrrpgip trsygvdlrn
       61 rrcecrrfet lhypcahvva acakvnvnve qyvddvytle rtlrvwekef pvlpdlsmwe
      121 vpptifellp drglrrnprg rpqssrirne mdireksdgk rcglcrlsgh srnkcpqrnf
      181 hvgqssglgr n
//
LOCUS       XP_016707006             223 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAINTENANCE OF MERISTEMS-like [Gossypium hirsutum].
ACCESSION   XP_016707006
VERSION     XP_016707006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851517.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="protein MAINTENANCE OF MERISTEMS-like"
                     /calculated_mol_wt=24238
     Region          56..>219
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..223
                     /gene="LOC107921692"
                     /coded_by="XM_016851517.1:1..672"
                     /db_xref="GeneID:107921692"
ORIGIN      
        1 mgqpagiama plirpdrhis datnqadsyr virgrvnglk kapdarlmpy leqarfgsaa
       61 lvrtsdlryd llsalverwr lethtfyfpc gectvtledv amqlglpidg rpvtgvssft
      121 dlaalcyqll gdsseddesn ftglkftglk akfgqlsata tegelmctgr ayimhilggv
      181 lmpdannnkv hlmyllllad lssvssyswg savlavlyrs ffg
//
LOCUS       XP_016707008             213 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_016707008
VERSION     XP_016707008.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851519.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707008.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..213
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=23819
     Region          <25..82
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          146..>189
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..213
                     /gene="LOC107921695"
                     /coded_by="XM_016851519.2:1..642"
                     /db_xref="GeneID:107921695"
ORIGIN      
        1 mdfnnavlng dlkeevymnq prsfeqlnkr fslkdlgdln fnlsvethkv genvilnqqk
       61 yiqevpqvva manckpsatp tvgspkleas asyfllkpsq yrsvvsklqy lcatrpdimf
      121 arilryfrgk inyrilfkat knkslvafvv gdwgssledr rstlgrgilg gnpiswsskk
      181 qpdvasstad scwkswqlnf ptcqlsgvtk pvq
//
LOCUS       XP_016707009             544 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707009
VERSION     XP_016707009.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851520.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..544
                     /product="uncharacterized protein"
                     /calculated_mol_wt=61713
     CDS             1..544
                     /gene="LOC107921696"
                     /coded_by="XM_016851520.1:1..1635"
                     /db_xref="GeneID:107921696"
ORIGIN      
        1 memkmidvas ggalvnmilq rvseliltla tnsqqyrppm epirrvhels tpsivnkide
       61 ltnvvknmla gqtnparlcg icvkldhptd sclilledtt tlvdvvgnfl gppqrhydpy
      121 sstynyqppk syleaivesl aistekfqqk teahfqeldq qisklaltvs hlenqekfss
      181 qtesntcqna stvtvkdete selvpgmscd hdveqeakpa aptestphkp fvvpppypgr
      241 laqvkkkred keilkafrkv einiplldai kqvpryvkfl kelcidkkkl qgnewvnvre
      301 nvstvlqrki spkckdqyrs cvypervled vlgkvnelif sadfyiinme ddyskntfdi
      361 llgrpflsta htnidvrsgt liiefdgevv kfnvyeamgq pstilniscv diiepltkfh
      421 feydeddglq tvlcknldln tmdkldelmt fkesiretvv fmeapqfpks hgkkfelshf
      481 qnkllhaisq asklelksvi etfknsnrgk gkpeqrssnt fqstddegiq kmlqgqrekv
      541 eifl
//
LOCUS       XP_016743038             250 aa            linear   PLN 06-AUG-2024
DEFINITION  lon protease 2, partial [Gossypium hirsutum].
ACCESSION   XP_016743038
VERSION     XP_016743038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887549.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         <1..250
                     /product="lon protease 2"
     Region          58..231
                     /region_name="LON/PUA"
                     /note="Uncharacterized conserved protein, LON_N-like
                     domain, ASCH/PUA-like superfamily [Function unknown];
                     COG2802"
                     /db_xref="CDD:442054"
     CDS             1..250
                     /gene="LOC107952284"
                     /coded_by="XM_016887549.2:<1..753"
                     /db_xref="GeneID:107952284"
ORIGIN      
        1 fqaifnsssl fqsrrfhrls slrcfassfp ekrhpyppqs desvrlplfp lplvlfpgav
       61 lplqifefry rimmhtllht dlrfgviysd pvggtsdvgc vgdifkherl vddrfflick
      121 gqerfrvtni vrkkpylvae vnwledrpss dedlegiade vescmkdvir lsnrlngkpv
      181 keaqdlrrnl fptpfsffvg stfegapkeq qalleledta arlrrekgtl rntlnylsaa
      241 savkdvfpss
//
LOCUS       XP_040942288             227 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b6, partial [Gossypium hirsutum].
ACCESSION   XP_040942288
VERSION     XP_040942288.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086354.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         <1..227
                     /product="cytochrome b6"
     Region          13..227
                     /region_name="petB"
                     /note="cytochrome b6; CHL00070"
                     /db_xref="CDD:177009"
     CDS             1..227
                     /gene="LOC121203388"
                     /coded_by="XM_041086354.1:<1..684"
                     /db_xref="GeneID:121203388"
ORIGIN      
        1 irfsggsswf tylnkvydwf eerleiqaia ddvtskyvpp hvnifyclgg itltcflvqv
       61 aigfamtfyy rptvteafas vqyimteanf gwlirlvhrw sasmmvlmmi lhvfrvyltg
      121 gfkkpreltw vtgvvlavlt asfgvtgysl prdqvgywav kivtgvpdai pvigsplvel
      181 lrgsasvgqs tltrfyslht fvlplltavf ilmhflmirk qgisgpl
//
LOCUS       XP_040942289             114 aa            linear   PLN 06-AUG-2024
DEFINITION  ribulose bisphosphate carboxylase large chain-like [Gossypium
            hirsutum].
ACCESSION   XP_040942289
VERSION     XP_040942289.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="ribulose bisphosphate carboxylase large
                     chain-like"
                     /calculated_mol_wt=12541
     Region          <1..114
                     /region_name="RuBisCO_large"
                     /note="Ribulose bisphosphate carboxylase large chain;
                     cl08232"
                     /db_xref="CDD:471793"
     CDS             1..114
                     /gene="LOC121213562"
                     /coded_by="XM_041086355.1:1..345"
                     /db_xref="GeneID:121213562"
ORIGIN      
        1 mhavidrqkn hgmhfrvlak vlrmsgrdhi hagtvvgkle gerditlgfv dllrddfiek
       61 drsrgiyftq dwvsmpgvlp vasggihvwh mpalteifgd dsvlqfgggt lghp
//
LOCUS       XP_016707000             163 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00860-like [Gossypium
            hirsutum].
ACCESSION   XP_016707000
VERSION     XP_016707000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851511.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="uncharacterized mitochondrial protein
                     AtMg00860-like"
                     /calculated_mol_wt=18711
     Region          1..74
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          137..>163
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     CDS             1..163
                     /gene="LOC107921687"
                     /coded_by="XM_016851511.1:1..492"
                     /db_xref="GeneID:107921687"
ORIGIN      
        1 mcvdyrrlnq htvkdkfsip vieelldelg eakswsehlq hlrsvllilr eqqlyakktk
       61 ycfgssqvhy lghvlqegtv smdtskidci lawviprsvk elrsflgltg yyrrfiknyg
      121 mmacpltdll kkngwewsdr ateafqtlkq aissapvlal pnf
//
LOCUS       XP_040942290             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942290
VERSION     XP_040942290.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086356.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23288
     Region          42..125
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..203
                     /gene="LOC121213565"
                     /coded_by="XM_041086356.1:1..612"
                     /db_xref="GeneID:121213565"
ORIGIN      
        1 mmsacgthsr gtrrrggrhr ktrdessslg smpnldmset lwwlsvkest qpdhlnwdyf
       61 kttfqgkfvd asyvdarrre lmnltrgdkt vagceakflk lsryargmva feyekcvhfe
      121 dglrdnlrvl iapqrvrefs vlvdkakite evkrierqnr dhergkkkrd selfnsvhip
      181 kkrakpdgps rvgvpvahtg vqp
//
LOCUS       XP_016706999             350 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706999
VERSION     XP_016706999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851510.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40877
     Region          36..>76
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     Region          288..336
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     Site            order(289..292,295,312,316..319,323,325..328,330..331)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349274"
     CDS             1..350
                     /gene="LOC107921686"
                     /coded_by="XM_016851510.1:1..1053"
                     /db_xref="GeneID:107921686"
ORIGIN      
        1 mvvdslsrke mtdlrtmlar lslaedgglg cicvpndkel rqsilkeahs spyaihhdgn
       61 kmyrdlqely wwlglkwapv kipqwkwewv ttdfvsglpl tpikkdlvwv ivdqltksah
      121 fipirtdysl qklaklhite igmlqscvid lrgsweeylp laefaynnnf qsssqmapye
      181 alysckfhts lcwtklsesr vlglelvsei entvrliqdr lkgasdrqns yadlkrkgie
      241 fsigdqlelp selelihnvf hvlilrryrs dpshiipvdk ielrpdltfe kepiqiierd
      301 vkilrkknvh lvkviwrnhg ieeatwepkk sirrqylylf esglefelyr
//
LOCUS       XP_016706998             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706998
VERSION     XP_016706998.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851509.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18959
     CDS             1..162
                     /gene="LOC107921685"
                     /coded_by="XM_016851509.1:1..489"
                     /db_xref="GeneID:107921685"
ORIGIN      
        1 masyealygr kcrtllcwve lgerqvlgpd lvfetkynvr lirdrlkaas arqksyadlk
       61 rkdieysvgd fiflklelpl vldrihdvfh vsmlrrywsn pshvvsiegi evrpdltlee
      121 esvqildrdi kvlrgksisl vkvlwwnhdt eeatwepkns mr
//
LOCUS       XP_016706996             391 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706996
VERSION     XP_016706996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851507.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..391
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45869
     Region          93..187
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          254..286
                     /region_name="SWIM"
                     /note="SWIM zinc finger; pfam04434"
                     /db_xref="CDD:309540"
     CDS             1..391
                     /gene="LOC107921683"
                     /coded_by="XM_016851507.1:1..1176"
                     /db_xref="GeneID:107921683"
ORIGIN      
        1 mqarfqyrvs yqkawiakqm aieqlygdyd ssynelqgwi agmreyvpgt vielqtrpyy
       61 gpddqlqptk rifhrmfwtf dlcvrafphy kpfvqvdgtw lyekytqill lavaqdgnrn
      121 mlliafaivd keniesweff lanlrryvis ndniciifdr gkcliaairr sgvpwrsvyc
      181 irhiaanfhk dyknadwekq vvtiepwqwv qsfdegfhyg qmttnlvegi navllktchl
      241 piasvfsatf yrsygvdlrn rrcecrrfdt rhypcahvva acakvnlnve qyvndvcmle
      301 rtlrvwenef pvlpdlstwe vppttfeflp drglrrnprg rpqssrihne mdireksdgk
      361 rcglcrlsgh srnkcphwnf hvgqsfgsgr n
//
LOCUS       XP_016706995             206 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706995
VERSION     XP_016706995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851506.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..206
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23161
     CDS             1..206
                     /gene="LOC107921682"
                     /coded_by="XM_016851506.1:1..621"
                     /db_xref="GeneID:107921682"
ORIGIN      
        1 mkeekivkqy sdgimavvns irlfgeqfse arivekvist lperyeakrl vktslsqmlq
       61 eeginptgia kdqviqketa sldqmysvnt tkrwamlkrf aeaktdqctt kekasqgwli
      121 dsgytnhmtp datifktinr sfktkekvgn ghfikvegkg dvlistptgn klvsnvllvp
      181 eidrnlpsia qllkkcysvv fkdkkr
//
LOCUS       XP_016706730             122 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-binding protein CML39 [Gossypium hirsutum].
ACCESSION   XP_016706730
VERSION     XP_016706730.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851241.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706730.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..122
                     /product="calcium-binding protein CML39"
                     /calculated_mol_wt=13531
     Region          50..112
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(59,61,63,70,95,97,99,106)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..122
                     /gene="LOC107921375"
                     /coded_by="XM_016851241.2:1..369"
                     /db_xref="GeneID:107921375"
ORIGIN      
        1 mhifssitst qnsnlddgaf vpkgidkacp ratwpatgkk rasvpiteeq vrgifhrydt
       61 nrdgllskqe lknafsslgs rmpgvrawla lqhadvngdg yineaefdkl vkytlkrgyk
      121 fn
//
LOCUS       XP_040942291             335 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CYPRO4-like [Gossypium hirsutum].
ACCESSION   XP_040942291
VERSION     XP_040942291.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086357.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..335
                     /product="protein CYPRO4-like"
                     /calculated_mol_wt=37685
     Region          <44..>237
                     /region_name="VID27"
                     /note="Protein involved in vacuole import and degradation
                     [Intracellular trafficking and secretion]; COG5167"
                     /db_xref="CDD:227496"
     CDS             1..335
                     /gene="LOC121213566"
                     /coded_by="XM_041086357.1:1..1008"
                     /db_xref="GeneID:121213566"
ORIGIN      
        1 mdhfreahil pflkiigldg eeesnelene eswwvlkvvt anqdlreese evayegiqsl
       61 algvldhsfl vgdsgvqvkn fangihgkgv yvsfdhgnpk sslylkphtt glhqldietr
      121 kivtewkfgk dgadismryi rndnkgsqle pirnrifmti gfaggynrpk wdghhqfsrg
      181 tnfrcfaspr ngstavgsln gkiqfystns mrqarttfpd lgfprthvyv tfdgkyldql
      241 drapsllklt pldshlagan nkfknaqlsw vtknrkqehh lvgtvgkfsv irnfqqfavt
      301 dsheaplvva tplkvrsfsi ssrqlfvplp lfpnl
//
LOCUS       XP_016706991             208 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706991
VERSION     XP_016706991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851502.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24377
     CDS             1..208
                     /gene="LOC107921676"
                     /coded_by="XM_016851502.1:1..627"
                     /db_xref="GeneID:107921676"
ORIGIN      
        1 mayqpqtdgq sdrviqvled mlrsyvikfn grkcrtplcw veldekvigp elvretkekv
       61 kiickrlkaa tnrkksyvdl khqdikfqag dkvflkvspw kkvlrfgrkg kfspkyvgsy
      121 evveriglva yrlklrpklq rihdvfhvfi pqkccsnlsh iapveeievr lhltydeepm
      181 eilahkekvl rnkrvplvkv lwcnhkte
//
LOCUS       XP_016706988             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706988
VERSION     XP_016706988.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851499.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..205
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22857
     Region          11..121
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(29,31,33,58..60,99)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            29..31
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            29
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(58..61,65..68)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..205
                     /gene="LOC107921673"
                     /coded_by="XM_016851499.1:1..618"
                     /db_xref="GeneID:107921673"
ORIGIN      
        1 mrrrdgsdda dvitgtffvh svlyyglidi gytnsyiasd vsinlsltae niarefsvis
       61 plgqsirvdr vykwvplelq givfqanlme lpfsefdlil gmdlliayrv slncetkkvt
      121 lrlnendevv mvgdistvre fpdvfpeelp gvppdrevef gidllpgnap vsnapyrmts
      181 kelaelkvql qelidkgfir psvsp
//
LOCUS       XP_016706989             366 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706989
VERSION     XP_016706989.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851500.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..366
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42136
     Region          <6..51
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Region          <170..233
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          265..>339
                     /region_name="rve"
                     /note="Integrase core domain; pfam00665"
                     /db_xref="CDD:459897"
     CDS             1..366
                     /gene="LOC107921674"
                     /coded_by="XM_016851500.1:1..1101"
                     /db_xref="GeneID:107921674"
ORIGIN      
        1 msklgipiet idlmelsfyg fdvilgmdwl teyqgkvefd tkqislrnsd gikiivnger
       61 prflsnvvsv mkaekmmgkg ceaylayvmn lvrketrved ihtfndfpdv fleewsglll
      121 ecegefgiql ypgatlvsil pyrmsqkelk elkillqell drgfiqpsiw rhylygekca
      181 nytnhksiky hlntkkklnl rqkrwiellk dydcvieyhp gkanvvanal srksitkmqa
      241 mfaylsltsg ggllqpivil ewkweritmd fvsglpltlt kkdyvwvivd qfsnsahfla
      301 mrtnyslqnl aelylvqivr lhgvpvsiis dggphftsrl vckrlwgril vlvwlttpkl
      361 iviqrg
//
LOCUS       XP_016706990             231 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706990
VERSION     XP_016706990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851501.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..231
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25613
     Region          12..143
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(45,47,49,74..76,115)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            45..47
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            45
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(74..77,81..84)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..231
                     /gene="LOC107921675"
                     /coded_by="XM_016851501.1:1..696"
                     /db_xref="GeneID:107921675"
ORIGIN      
        1 mvmievesgg paqvyvvrep kdqdltnvia stfilqstpl fslvdfgsth lyllselack
       61 leiavetigf gmtvissfgd svvmnkfyrk cplmiqghvf sidlmelsfn gfdvilgmnl
      121 ltehkvkvdf etkritvrns dgleivvvgk rpgfmcsvvs tmkaekfmgk gceaylayim
      181 nlvskelrvq dihtvrdfhg mfleelvglp pnhevefvie fclgtapvsi v
//
LOCUS       XP_040942292             507 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1-like [Gossypium hirsutum].
ACCESSION   XP_040942292
VERSION     XP_040942292.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086358.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..507
                     /product="increased DNA methylation 1-like"
                     /calculated_mol_wt=57113
     Region          148..200
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          231..270
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(240..243,247,265)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277007"
     Region          <401..484
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
     CDS             1..507
                     /gene="LOC121213567"
                     /coded_by="XM_041086358.1:71..1594"
                     /db_xref="GeneID:121213567"
ORIGIN      
        1 msvgegevce gavrkkgcsg rpknskaksh lwakdrvfry ahenrkqevr yqspnvklyh
       61 slktacksfi ddgtmgnlep kqpqkrkclg pktqplspkr skkvkkqenr isdrkprtdl
      121 swlidnkavs ilekvyyrsk tgtplikgri trdgiqclcc fkvfaltafe vhagstnrrp
      181 aaniilddga grslsdcqrq vrhstspsiv dnpnsktakf nsiehendea csvccyggel
      241 icceycpsaf hmnclglnev pdgnwfcpsc ccgicgigyl reksyrtchq celkfhidcl
      301 slkssenmvl lcsqkcekvf yglqkltgkp ipagnnltwt llksdhhgae nhsqlrvalk
      361 vkhecfeptk ndetgrdvve dvvfsrvskl krlnfkgfyt viveekedvv svatlrvygn
      421 rvaemplvat sfrhrrrgmc rllvdqvekn lvklgvekli lpalpttvdt wvkcfgftpm
      481 ekdeilnlll yslldfqgti lcqkllt
//
LOCUS       XP_016721118             251 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016721118
VERSION     XP_016721118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865629.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29036
     Region          <1..42
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..199
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(80..83,113..115,118,142,182,196)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..251
                     /gene="LOC107933421"
                     /coded_by="XM_016865629.1:1..756"
                     /db_xref="GeneID:107933421"
ORIGIN      
        1 mestvlnerm arwqillsef dmvyvsqkai kgsaiadfld sraledyepl dfdfpnedlm
       61 yianseedsq enhswrmnfd gasnalgngi gailvspngd hhpftskldf dytnnmaeye
      121 acimgiraai eqkiktlevy gdstlviyql kgewetrdpk lihyqrlvle likefdnitf
      181 wylprdenqm adalatlasm ikvnkledmk piqisiyeip ahcysieeve ndncpwyqdi
      241 lqyvkdrkyp n
//
LOCUS       XP_016706983             398 aa            linear   PLN 06-AUG-2024
DEFINITION  centrosomal protein of 135 kDa-like [Gossypium hirsutum].
ACCESSION   XP_016706983
VERSION     XP_016706983.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851494.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706983.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..398
                     /product="centrosomal protein of 135 kDa-like"
                     /calculated_mol_wt=46752
     Region          <141..>394
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..398
                     /gene="LOC107921668"
                     /coded_by="XM_016851494.2:1..1197"
                     /db_xref="GeneID:107921668"
ORIGIN      
        1 matlqnlqeg diewrahwml sdeilyrcgd fdwvpllgiw gaigyapllv lrqyrsrqfv
       61 ptthglaqce fsykcdgykk kiremtnswr qtrrlkrlav gpsmtpeyie wlnrrindni
      121 pvpgqgdsqf vekhvhmvps eleiikqdfe rrnselekki eqmegekmnl rlnidvqkle
      181 teglrkgkrk veedlnslkt dykrlrlsvr taglgktseq wrqevqeeka kadrwekrfq
      241 eaqkqnksfe rslsksqner dklkarvael ekiiyqyrnq nsvaelqasl srieqmkkti
      301 eeleiasqny eariehlean edhqseqlhy lqdevarrdh imgeavvqiq gvaehlqtle
      361 iqadilsvky esesdqgqkl asllreikvl sirarpyl
//
LOCUS       XP_016706982             406 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706982
VERSION     XP_016706982.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851493.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706982.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..406
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46843
     Region          187..305
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            order(222..227,258,260..261,301..302)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     Site            order(222..227,260)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238825"
     Region          336..>405
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(340..343,373..374,377,402)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260006"
     CDS             1..406
                     /gene="LOC107921666"
                     /coded_by="XM_016851493.2:1..1221"
                     /db_xref="GeneID:107921666"
ORIGIN      
        1 msegsreata ppvpigtpfk gdlvkeirkk gvkeflgdkg ddstvaeqwl sqvcrvikel
       61 ecmsgdsvlc avsllereay wwwetltsgr isvmeyehef vrlshyaknm fqtekeisek
      121 fewgltgayl ayimdssesr kdisqvsivr dfldvfprql fgipldrevd fsielepgtt
      181 pisytpyrmv plelkelkvq lqdliqdlvn qlsgdtifsk idlrssyyqv kirgddvpkt
      241 afhsrvfqsy fdqfvvvfid dilvysknee hlrivqrilc enklyakfsk cefwlievhf
      301 lgyvipvkgy ygrfvkgfvm lvtpltpkpe fgveytvyid aslnglgcvl mqrgkvvaya
      361 srqlkphern ypthglelat vvlalkiwrh ylygkkccvf ldyksf
//
LOCUS       XP_016706979             175 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706979
VERSION     XP_016706979.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851490.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706979.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..175
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20290
     Region          137..175
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     CDS             1..175
                     /gene="LOC107921663"
                     /coded_by="XM_016851490.2:1..528"
                     /db_xref="GeneID:107921663"
ORIGIN      
        1 mdfvsglplt ptkkdtvcvi vdrltksayf ipvrtdyslq klaklshrgk kilrfgqngk
       61 lsprfiapyr ilkrvgpvty qlellseldq ihdvfhvsml tcyhcdptht vtveeievrp
      121 dvtfeeepvq ildrevkvlr kkfiplvkvl whnhsskeat wepeeamqrq yphll
//
LOCUS       XP_016706978             287 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706978
VERSION     XP_016706978.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851489.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706978.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..287
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32875
     Region          <152..255
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     CDS             1..287
                     /gene="LOC107921662"
                     /coded_by="XM_016851489.2:1..864"
                     /db_xref="GeneID:107921662"
ORIGIN      
        1 mpnyvkfmkd ilsnkrrlge feivaltegc ttmltnklpp klkdpgsfti pysignqyig
       61 kalcdlgmsi nlmpmsvfkn lelqdlplnl aigksiilip egrtvidvqk gelimkefek
      121 echdkehnel dsididdeep lgnnndlles kqivdrpgkr smmkflhkni ftrfgtplsi
      181 isdegshfdc kpidntlqny gvkqkivtay hpqtnrqaks snreikqile kvvnpnrkdw
      241 slrldealwa yqttyknplg mspfklvyek pclflveleh raywaik
//
LOCUS       XP_040942293             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942293
VERSION     XP_040942293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086359.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31813
     CDS             1..274
                     /gene="LOC121213569"
                     /coded_by="XM_041086359.1:1..825"
                     /db_xref="GeneID:121213569"
ORIGIN      
        1 mvefrevlke cqlidvgysg twytwekgnl petnirerld rgvanekwme lfprgnihhl
       61 tsslsdhcpl listtnesrf kgipsfkfea wwttkesied eikkswessn gsifekieil
      121 qislskwaks ikkerkgltd kltkvledlm ekerdddima qiidmrihln meidkeemyw
      181 eqraranwlk lgdkntaffh kyasmrkrin tisrldtddg ngifeesein etatkyfqnl
      241 fstngvgnls hlltsinnsv spdinttlla kyta
//
LOCUS       XP_016706976             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706976
VERSION     XP_016706976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851487.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23883
     Region          59..180
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(61..64,98..99,102,126,165)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..211
                     /gene="LOC107921660"
                     /coded_by="XM_016851487.1:1..636"
                     /db_xref="GeneID:107921660"
ORIGIN      
        1 meaimelsty keyydeskrg lctvvylgas atqplsrdpr iikenkrwky pqwefikinf
       61 dgaynesqnr sassivards egkvllscse ihddissafa aeaiacwkav qvgvekgwqs
      121 lifegdslai ikkcstkgqd rsmvgayiyd iqqkihglnn irfqhtprsa nnlahilate
      181 tlrrreeiyl emgvpeyaed qtrydgvsep d
//
LOCUS       XP_016706975             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706975
VERSION     XP_016706975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851486.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13662
     CDS             1..117
                     /gene="LOC107921657"
                     /coded_by="XM_016851486.1:1..354"
                     /db_xref="GeneID:107921657"
ORIGIN      
        1 mvqldeldel rakadekprk hkevtkqshd vhvkrmnqfk ildkvlldkl dprmfplelk
       61 lrgsntfvvq nvfpyvtiev thsdydtfkv nslhlklyfn gntaltvslk revelrl
//
LOCUS       XP_016706972             643 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706972
VERSION     XP_016706972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851483.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..643
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72752
     Region          461..544
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(466,468,470,496..498,537)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            466..468
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            466
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(496..499,503..506)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..643
                     /gene="LOC107921654"
                     /coded_by="XM_016851483.1:1..1932"
                     /db_xref="GeneID:107921654"
ORIGIN      
        1 mngemiesai ksekidages nrrsalrkke negssreesg vrqstkkpqf tpipmsckel
       61 yqnlfdahav spfylnplqp pypkwydvna qcdyhagitg hsienctafk klverlidmg
      121 vvkvndaygv enslpnhtdn gvnmisenig krvqknivev ktllkwvwee magrgliisd
      181 sdeageikny cefhyevghe iqrceefrvl vqimmdnkem efyeeaeekl ricasesmtr
      241 ipkvyhpmii isrpkineag tqvtpkiviq kpinfsykeg kkvswnyecn vtipggeasi
      301 sitkgneeag symhsgkcyd linaraepae gkilmteqkk ekaveskplv nelikeeeak
      361 efleflkhse ysvveqlhkq psrisvlall lslkvhrsal ikvlsktyva ndisinkldr
      421 lvnnisaknf iffnndeips ggmgstkalh ittqckwytl lrvlidngsv lnifplstln
      481 rlpvdsshmk tcqnivrafd vterkvmgri eiplligptt yevdflvmdm kpsyncllgw
      541 pwihsagvvp sslhqklklv sdrrlviina eegiitsitc dapyvetned avewgfihpk
      601 rrrpkkesie eilgnvhina idyaeegtll girpyepgse lnn
//
LOCUS       XP_016706973             161 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706973
VERSION     XP_016706973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851484.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..161
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18877
     Region          <1..74
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..161
                     /gene="LOC107921655"
                     /coded_by="XM_016851484.1:1..486"
                     /db_xref="GeneID:107921655"
ORIGIN      
        1 mgiraaierk ikvlkvygds alviyqlkre wetrdsklis yrkmvlklid efnditfcyl
       61 lrdenqmada latltsmiqv nkledmkpiq msifetpahc csieeeekdy hpwylnilqy
      121 vknceyldqa tendkralrr iaidyvldge ilykkggigy y
//
LOCUS       XP_016707241             319 aa            linear   PLN 06-AUG-2024
DEFINITION  5'-adenylylsulfate reductase-like 4 [Gossypium hirsutum].
ACCESSION   XP_016707241
VERSION     XP_016707241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851752.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..319
                     /product="5'-adenylylsulfate reductase-like 4"
                     /calculated_mol_wt=35994
     Region          67..166
                     /region_name="PDI_a_ERp44_like"
                     /note="PDIa family, endoplasmic reticulum protein 44
                     (ERp44)-like subfamily; composed of uncharacterized
                     PDI-like eukaryotic proteins containing only one redox
                     active TRX (a) domain with a CXXS motif, similar to ERp44.
                     CXXS is still a redox active motif; cd02999"
                     /db_xref="CDD:239297"
     Site            96
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239297"
     CDS             1..319
                     /gene="LOC107921959"
                     /coded_by="XM_016851752.2:1..960"
                     /db_xref="GeneID:107921959"
ORIGIN      
        1 mgtkasqtrm lilvfwwrlt cavfvplrvp lcpkvsvsda ifdfrdsycp itsartqsiv
       61 fvgvtegdev smqkalnmvy rnghgyvavl fyaswcpfsr sfrpsfnils ssypciphfa
      121 ieessvrpsi lskygvhgfp tlfllnstmr aryhgnrsfe slgafysdvt giknsldkts
      181 lekighlsnq ekhnsteqes cpfswarspe nllrqetyla lattfvlfrl lyllyptflv
      241 faqltwrrli rnvklgtlle hplaylkrai qlfnslkepc krsnlqgamn arawasksla
      301 tvsigdantn rvvpitgcr
//
LOCUS       XP_040942294             481 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942294
VERSION     XP_040942294.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086360.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..481
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52466
     Region          166..183
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     Region          <235..327
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(236,238,263..265,304)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            order(263..266,270..273)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..481
                     /gene="LOC121213570"
                     /coded_by="XM_041086360.1:1..1446"
                     /db_xref="GeneID:121213570"
ORIGIN      
        1 mstrgthrrg tggrgrgrgs aragssvsgl mpnvearevl aspvtetgsf draagddvls
       61 qamlhilkrv vrtsngavgp pqreqdfaal vekveiaedv krserqncek drgrfkrdle
      121 psssskrpkk karfdgpvga gvsvarpqsr tdcgryhlge cwkkigacfr cgskehqvkd
      181 cpqmptqmqa vrggngvgqi rgtfgrgign searqltlvc aarhredgda ldvitgsths
      241 yiactvsgtl gimcestvnk mtvlsplgqs vrvdklfrdv plevqeiifl adlmelpfge
      301 fdlilgmdwl vkhcasldca akrmvlkaie ddevvvigeq rdflsnvisa lsveklvrkg
      361 cetflayiga svskglsvrd vrivkdffdv fldklprlpp srevefgiel lpgtasvsfs
      421 sksegvlcvl qlskslfhhs iklsvkkiav nfrqwfrwak pllsveilgi rgsytlsqtg
      481 v
//
LOCUS       XP_016706970             116 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706970
VERSION     XP_016706970.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851481.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..116
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13634
     Region          <97..>115
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     CDS             1..116
                     /gene="LOC107921652"
                     /coded_by="XM_016851481.1:1..351"
                     /db_xref="GeneID:107921652"
ORIGIN      
        1 mrfdrkgkls prfigpyqil krvgpiayql elpskldhlh dvfyisilrr ywsgpshvaf
       61 vekieirlgl tfqeepiqil drdiqvlmrk siplvkvlwr nhgtkeatwe pedsmh
//
LOCUS       XP_040942295             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942295
VERSION     XP_040942295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086361.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..176
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20018
     Region          12..38
                     /region_name="DUF4219"
                     /note="Domain of unknown function (DUF4219); pfam13961"
                     /db_xref="CDD:433608"
     Region          75..>156
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..176
                     /gene="LOC121213571"
                     /coded_by="XM_041086361.1:207..737"
                     /db_xref="GeneID:121213571"
ORIGIN      
        1 mgdviqlqvp qltktnygnw sirmkallgs qdcweivekg yiepgdaate aalsndakka
       61 lrearkkdqk alnsifqgmd estfekisdv knaknaweil qklfqgvkka kkvrlqslra
      121 efemlkmkss eniddyanrv ksvvnemkrn getldevrvm eitsadqhtk wmketm
//
LOCUS       XP_016706968             151 aa            linear   PLN 06-AUG-2024
DEFINITION  tropomyosin-like [Gossypium hirsutum].
ACCESSION   XP_016706968
VERSION     XP_016706968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851479.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="tropomyosin-like"
                     /calculated_mol_wt=18347
     Region          <1..>149
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..151
                     /gene="LOC107921651"
                     /coded_by="XM_016851479.1:1..456"
                     /db_xref="GeneID:107921651"
ORIGIN      
        1 meeylqvips eleiikkdfe krnlelekki erleeekmhl rldadwrqei reekgkagrw
       61 ekkcqetqlq nealeknlle srsetdelke riaelerslh ryrnrntave lraslskiee
      121 ikkrveelea tlqdyemrve ffeaneerlk e
//
LOCUS       XP_016706967             984 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706967
VERSION     XP_016706967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851478.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..984
                     /product="uncharacterized protein"
                     /calculated_mol_wt=112066
     Region          102..370
                     /region_name="RT_nLTR_like"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; cd01650"
                     /db_xref="CDD:238827"
     Site            order(192..197,251..252,297,299..300,366..367)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     Site            order(192..197,251,299)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238827"
     Site            252
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238827"
     Region          580..670
                     /region_name="zf-RVT"
                     /note="zinc-binding in reverse transcriptase; pfam13966"
                     /db_xref="CDD:433612"
     Region          772..891
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(774..777,811..812,815,839,878,892)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..984
                     /gene="LOC107921650"
                     /coded_by="XM_016851478.1:1..2955"
                     /db_xref="GeneID:107921650"
ORIGIN      
        1 mlcvavkyfe klftalasgs darildlvee ritrnmnevl lqpftkddiw lavksmaplk
       61 aprpdgfpal ffqqywhivg devasfciev lngsremgel nkthivlipk vdkprdlthf
      121 rhislcnvly kiiaiaivtr mrpfldscid eaqgafiprr qisdntpiay evlhslklkk
      181 kgkqgnfahk ldlskaydrv ewdflagmls rlgfiqdwlv limryvcsvt ytigingdvs
      241 etfrpsrglr qgdplspylf llcaeglscl lreaisknel rgapigrrnl tishllfadd
      301 ciifgdasae garvvrhifq eyeiasgqki nlgkslifgs nvgevirtei igilgvrwas
      361 nlkkylglpm mverkkkwaf ssfqdrfrkr iaswscryls mggkkvfiks vlqalpvyvm
      421 qcfelpksfc pqlegilnkf wwtnnksskg iywstwsalc lpkalakvgs ypsftwrsic
      481 gardvfddrl lwrigsgtnv niwndpwipg prngrllvns mnpqwttvdq llneeshtwk
      541 keviyqlfda dqarciinip vagrgfsnll vwkhdatgey svkseyrilv tnmnqliatk
      601 nysklftsiw disiptkiki hlwcllkdyv phygnlvkrr lrvesvcplc msepedshhi
      661 lwycsilrql wvqlkiavnf dvftsdgktn fvsaflamdn nfkklsaisl walwykrnkm
      721 vneglkfelh elvgfvqsyd qdlrftiakd lttgmrqnss wqppqtgfik lnfdasfenk
      781 sncsisavla rdfeglvmga ctvsnddiad afvaearace ralyfardmg frkvvlegds
      841 itvikklktn aidrsilspi sqhirvsteg feevtynfvp sevnkaahal amivkgglag
      901 vdlearaqer vlrlvsmrgv qrltvevyvl gmedrsrrvk giwvagllvt vlsvvikdwl
      961 rwiqrskvlh falqlekvhr tpma
//
LOCUS       XP_016706965             380 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706965
VERSION     XP_016706965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851476.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..380
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43492
     Region          54..115
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..380
                     /gene="LOC107921647"
                     /coded_by="XM_016851476.1:1..1143"
                     /db_xref="GeneID:107921647"
ORIGIN      
        1 mirtlekvag tysgsrgrgs vterlrsnga kffrgiirvt ptvaeywlea ieravsllrd
       61 eayqwwlmve qgaqpgqgnr svaeyeaefl rlnryaravv asdynkcvrf eeglrydlrv
      121 liapqrewvf avlvhkekiv eevkrngrkr hdssgirclk kqvrfdkplr petptvviei
      181 qlcsdcgkhh lgecwrklea flrcgsmehh vrdwprqpdq rapgrgagqt evhhptlvya
      241 mrhredsnda dvivesvvsa nldltaenta refsmmsplg idwlveywvs ldcatkrvtl
      301 rtdendevim vcehrdylsn visalvadke fldvfleelp gvpldrevef sidllpgtal
      361 vsiapyrmap kelielkkql
//
LOCUS       XP_016707777             133 aa            linear   PLN 06-AUG-2024
DEFINITION  copper transport protein ATX1 [Gossypium hirsutum].
ACCESSION   XP_016707777
VERSION     XP_016707777.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852288.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707777.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="copper transport protein ATX1"
                     /calculated_mol_wt=14430
     Region          <1..62
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          70..129
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(75..77,80)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     CDS             1..133
                     /gene="LOC107922309"
                     /coded_by="XM_016852288.2:1..402"
                     /db_xref="GeneID:107922309"
ORIGIN      
        1 mdahvaeaii mrkalswikd sncdqiviel dcmevfnalg qassrvsefg lvlndctklk
       61 drcamsqtvv lkvgmscegc vgavkrvlgk megvesyevd lkeqkvtvkg qvqpdavlqt
      121 vsktgkkttf wda
//
LOCUS       XP_016706406             466 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucosyltransferase 29 [Gossypium hirsutum].
ACCESSION   XP_016706406
VERSION     XP_016706406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850917.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..466
                     /product="UDP-glucosyltransferase 29"
                     /calculated_mol_wt=52791
     Region          2..431
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(19..20,22,164,167..168,172,199,271,350,352,354..355,
                     358)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,271,350,352,354..355)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..466
                     /gene="LOC107921064"
                     /coded_by="XM_016850917.2:1..1401"
                     /db_xref="GeneID:107921064"
ORIGIN      
        1 mdtkqkrirv lmfpwlahsh issflelakk lmnhnlyvyf cstatnldsi kpkisphhsl
       61 siqfielklp llpelpsyyh ttkglpthll nalfkavems gdgfatilkt hnpdlliydl
      121 hqpwaptlas slnipailfy tasaagpffa fhawkklkge efpspefyin dcfmptkssr
      181 nefgrtppds sntektfqaf rhsldiilvk sfselegkym dylsillnkk vvptgplvqd
      241 aieehhenek eilewltkkr kastvlvsfg seyylsnker eaiaeglels evnfiwvlrf
      301 pvgdkdkpkl eealpegyle rigerglmve gwapqakilq hssiggfvsh cgwssvmesl
      361 kfgvpiiamp mlmhidqpln arlvqdvgvg vevkrgkdgs lereeivkvi kqvvgekdge
      421 nirnkarems nhikikrdee vdevvqeink ilhkgglkih dkkvnv
//
LOCUS       XP_016706963             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706963
VERSION     XP_016706963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851474.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29565
     Region          69..205
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     CDS             1..258
                     /gene="LOC107921645"
                     /coded_by="XM_016851474.1:1..777"
                     /db_xref="GeneID:107921645"
ORIGIN      
        1 mlepapnkpf fkeilldnss tiprvgmrmp lneeeevtll dddvsismdg pypqvcfstr
       61 vhylidehnk qmvivrmlgr pigyralank ikslweltgd ykivdldnny flvklasqnd
      121 ynrvimgvpw mvyghylvvq pwnryfftee nypskiiawi rlpglhyfyy tkglvralas
      181 vignvvkvdy ntidgtrgkf arvavvvdis kplvpfigvd rkkqtivyes lpsiyytcgk
      241 vshikencsq gpkeqtvn
//
LOCUS       XP_040942296             372 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942296
VERSION     XP_040942296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086362.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42226
     Region          76..350
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..372
                     /gene="LOC121213572"
                     /coded_by="XM_041086362.1:1..1119"
                     /db_xref="GeneID:121213572"
ORIGIN      
        1 mhpqsaearn ptlnlpsssa hsynqkinsi watsstslwa lafsshgias slpsitfpts
       61 trklpstdpr kcdtiisflk esgfskshie avvkrkpnll ysslektikp kfkifqdlgf
      121 sthdvadiva sdpwiltrsv ddriapsisd lktvlgsndd vvkllktsaw flksdlqktm
      181 mpnieflrnc gicssqivsy vfsfprffll kpesikqfve radalgfdrk snmflaairm
      241 lssmseenwe lklklfrklg fseddimstf rrtpqvfavs erkikqvtdf llnrtnvgis
      301 fiishpmvli cslerrlkpr llvietlesk nslrrkvsmt tiykmpdkkf rekyvvpylk
      361 eleevsmsiv gt
//
LOCUS       XP_016706324             497 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706324
VERSION     XP_016706324.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850835.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706324.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55308
     CDS             1..497
                     /gene="LOC107920988"
                     /coded_by="XM_016850835.2:1..1494"
                     /db_xref="GeneID:107920988"
ORIGIN      
        1 mgfaaangke skgmglllvf fhgdqnkitn ssvdnqtttt ttppstrfvr rtasssllfs
       61 kaqstisicl vlvfltillf tlstfepsis tpsfipslti knsrrflsqk tqfppppplk
      121 wffpmwdynk pvnvkqnpgv lpssfalqrm gtlyrrgtka mhdlivshvv edvtedelrl
      181 flrvlhrsgi tskadivflf gssssrfnlv iheendsffn liqhykasnn kgsrdsvfsf
      241 esaqfwksgk kdvgetiwgk kgrgnsgdst eaegestrlt ygsvvgfdvn eldpenslag
      301 fldhvpmsfr rwacypmllg rirrnfkhit lvdvksmmll sdplgrvrnr spesvylltk
      361 esstggkhsk rnsdktqshl qvnsailmgg argirrlana mlteivratm qhkkkknsis
      421 eseilsqlvg ngyllknvdl itstesiqea sslmssssns taeysiiqrg nsshdlssii
      481 mkliclcetn syvyrdc
//
LOCUS       XP_016706959             338 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706959
VERSION     XP_016706959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851470.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..338
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39094
     CDS             1..338
                     /gene="LOC107921640"
                     /coded_by="XM_016851470.1:1..1017"
                     /db_xref="GeneID:107921640"
ORIGIN      
        1 mandfidkve dnalvriwse kmqlekkdsl akdyvselwd yirisvtqns lqelseiwdq
       61 wddetkqliy snygdlpyll sikvderlfr alaqywnpay scftfanvdl vptveeytal
      121 lhcprlqvdk ayskaayvpa fwkklmsitg mseqwimtsi kqkgeckcip wrnlrdlila
      181 hpdekkkvdv falsiyglvi fpralghvde vvsdlvdrlg kgvthvpail vktfrslnac
      241 rrasegelvd kvsyrvfsqh ysplkeivat prrddisken wiailqnlke devdwrapwl
      301 ipygilyrcg sfdwvpllgi wgavgyapll vlrqynsr
//
LOCUS       XP_040942297             702 aa            linear   PLN 06-AUG-2024
DEFINITION  insulin-degrading enzyme-like 1, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040942297
VERSION     XP_040942297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086363.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..702
                     /product="insulin-degrading enzyme-like 1, peroxisomal"
                     /calculated_mol_wt=80427
     Region          <18..665
                     /region_name="Ptr"
                     /note="Secreted/periplasmic Zn-dependent peptidases,
                     insulinase-like [Posttranslational modification, protein
                     turnover, chaperones]; COG1025"
                     /db_xref="CDD:440648"
     CDS             1..702
                     /gene="LOC107921627"
                     /coded_by="XM_041086363.1:1..2109"
                     /db_xref="GeneID:107921627"
ORIGIN      
        1 mhfvinltlq khlsleshpf hnfstgnwdt lyvrpkakgv dtrqellkfy edkysanlmh
       61 lvvyskesld kiqclvedkf qeiqnsdrsh fqfpgqpcts ehlqilvrav pvkqghklri
      121 vwpitpsilh ykdgpckylg hlighkgegs lfyvlkrlgw atglsagegv ctsefsffkv
      181 vigltdagqd rmqdvigllf ryiqllqesg vckwifdels aicetgfhyk drispmyyvl
      241 nissnmqryp ekdwlvgssl psdfnpttiq kilnelspes vrsfweskkf egltdkvepw
      301 ygtaysiekv spstiqawms sapnenlhlp apnvfiptdl siknaqekik lpvslrkssy
      361 sklwykpdtv fftpkayvki nfdcphains setevltdlf trllmdylne yayyarvagl
      421 ryhvrctdsg fqvtlvgynh klrilletiv dkiakfevkp drfsvikema ikdyqnwkfq
      481 qpyeqakdyf sliledqswp wmeqlevlpc lnaedlakfa pimlsrafle cyiagnivhe
      541 eavsmihhve dvffkgsnpi cqplfpsqil rnrvvklgkg mnycyskegl npsdensalv
      601 hyiqvhrddf klnvklqlva fiaeqaafhq lrsveqlgyi tllrlrndsg ihglqfiiqs
      661 tvkdpglmkl vqhaansttc rprrpshaga adaslfclfc ns
//
LOCUS       XP_016706948             241 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706948
VERSION     XP_016706948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851459.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..241
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27250
     Region          <2..87
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(18..21,25..28)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          159..240
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     CDS             1..241
                     /gene="LOC107921629"
                     /coded_by="XM_016851459.1:1..726"
                     /db_xref="GeneID:107921629"
ORIGIN      
        1 mvnelgilve tigqgmvvts llggsvlvdr vyrrcllavq gntflvdlmk llfrgfdiil
       61 rmdwltkhgv kisfetkhlt lrfevgleiv vvgerpefcs navsttkvdk lmskgyeayl
      121 ayvlnsrska gyyrkfvkgl siitapltkl lqknmpfewt eerqrcfdkl ktvlikapvl
      181 vqpeskkeyv vysdesykgl gyvlmqdgkl vayasgqlrp hernypthdl elatvvfalk
      241 v
//
LOCUS       XP_040942298             609 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942298
VERSION     XP_040942298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086364.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="uncharacterized protein"
                     /calculated_mol_wt=69097
     Region          194..290
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(209,211,213,237..239,284)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            209..211
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            209
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(237..240,244..247)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          481..>576
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     CDS             1..609
                     /gene="LOC121213574"
                     /coded_by="XM_041086364.1:1..1830"
                     /db_xref="GeneID:121213574"
ORIGIN      
        1 mvnklaanvl dfqqqtinfq ketkdfqqki easireltis iekltsqgkl psqtepnsrq
       61 nanavtlrsg kvlepipdrn laqeiaqekp ekdeqvrpkp plpkiqppfp erfnqcrrgk
      121 edkeiletfr nveiniplld aikqipryak flkelctnkr kltgnesvnv gengsavlqr
      181 kmpakckdrg ifaipckigh lgikkamcdl gasiiimpys iyeslnagfl tkagviiqla
      241 drsvvhperv ledvlvkvne lifpadfyvi kmeedstlgs sdlllgrlfl stastkidvr
      301 sgtltmefdg eivkfnvyda ishpseilsv nridiidslv eenyesiyen dseldeiefv
      361 nellspntkl lpsviqapel klkplpehlk yaflgkgntl pviisnrlst heeeslvhil
      421 kshkeaigwt iadlkwispl tcthriylee dtkswreaqr wlnpnvmevv kkeiikllda
      481 dviyplsdsr wvspvqvvpe ktgvtvkknv egdlvptrvq ngwrvcidyr klnsytrkdh
      541 fplpfidqml erlarkthfc cldgysgffq ipvapetkkr pllhahsvhl hiegchsvfa
      601 irqppsknv
//
LOCUS       XP_016706951             206 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706951
VERSION     XP_016706951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851462.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..206
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23047
     CDS             1..206
                     /gene="LOC107921631"
                     /coded_by="XM_016851462.1:1..621"
                     /db_xref="GeneID:107921631"
ORIGIN      
        1 makmmvmmta lvkgkgsvqs phivesqsra nqdppyppef tpphahamqr gypqgeptvl
       61 eqrpvppahl gqgifvsnpg anladpivpd lddpveiakl ktddyntqdr ykileerlka
      121 iegtevfsal sakelslepd lvlplkfkvp efekydgtrc lkahlimfcq kmtsyvneen
      181 llihcfqdsl dgsalqwynq lsreki
//
LOCUS       XP_016706952             496 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706952
VERSION     XP_016706952.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851463.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..496
                     /product="uncharacterized protein"
                     /calculated_mol_wt=56223
     CDS             1..496
                     /gene="LOC107921632"
                     /coded_by="XM_016851463.1:1..1491"
                     /db_xref="GeneID:107921632"
ORIGIN      
        1 mvpnrltlqm mekkptetfk qyaqrwrdis aqvepsltkt eitvlfintl kalfydklve
       61 satkdfadiv isrelienti krgrmegpes skravpvrkk kvethmvkna shntsnpyss
      121 qprphyrlps nfyfppqgsy yptpslypvy amnnqrlfam fppntmptqs qpkndqrpak
      181 pssekpqfti ipvpygelyl kllkkqlisp hymaplkppy pkwddpnasc tyharnqghs
      241 tenclalkrr vqdlidagil rfdgvsnmag nplpnhtdgn vnavtnedgr rakscvakvk
      301 tplrnvwemm vkkgllcpqn rivkeeniig psfcdfhgtg ehdiqsckgf rkllqdmmdn
      361 kevkifdrik eadegeicvs edqpsaipys adrplviyye akneevkpkv iievpspfpy
      421 kdskaiswry dvnivvpege kskatagsvs gvghftrngr cyslemvepk kkvivsnqkg
      481 kaplqedeid veisse
//
LOCUS       XP_040942300             237 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942300
VERSION     XP_040942300.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086366.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..237
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27730
     Region          66..>155
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(71..74,104..106,109,133)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..237
                     /gene="LOC121213575"
                     /coded_by="XM_041086366.1:1..714"
                     /db_xref="GeneID:121213575"
ORIGIN      
        1 marwqillse fdivyvsqka ikgsaianfl asralkdyep ldfdfpnedl myvanaeedp
       61 qenhpwrlnf dgasnalgng igavlvslng dyhpftskld fdctnnmvey eacimgiraa
      121 ierkiktlev ygdsalviyq irgdwetrdp kliryqrlle dmkpiqisiy eilahcynie
      181 eiendnrpwy qeillymknr eypdqatend krtlrrlaid yvldreilyk remieyc
//
LOCUS       XP_016706956             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706956
VERSION     XP_016706956.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851467.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20186
     CDS             1..179
                     /gene="LOC107921638"
                     /coded_by="XM_016851467.1:1..540"
                     /db_xref="GeneID:107921638"
ORIGIN      
        1 mdqrlerleq lqkemqdqlq lqvqeqldki qqdmmdkmme sqrsmmtqlt qllaggndkg
       61 kgpmanaees dndglpyppg ltsphvqtqa evsgsnpgdn pinpvipnfd evakkkknkg
      121 giakrarkmc kwleekfram estenyhgid akdlslvlnl vppykfkmpe fekygsvdc
//
LOCUS       XP_016706957             622 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706957
VERSION     XP_016706957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851468.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..622
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70633
     CDS             1..622
                     /gene="LOC107921639"
                     /coded_by="XM_016851468.1:1..1869"
                     /db_xref="GeneID:107921639"
ORIGIN      
        1 maqltqllar evnkgkgpmt npgegnedpl yppdftppnv qtqaemytrr psvtirpqql
       61 qagvsmpmnf rggsssslgd nlinpiipnf deaaeegkan velpkrwedr ckwleekfka
      121 mesayshhgi dakdlslvpd lvfmkqyndv tdmspdritl qnmekksses frqytqrwre
      181 vaiqaaatlg erdddifsdi imngemiesa irngkieaee snkrsaskrk enevnnvnty
      241 nksitvnrpr kvvasqqgst rqesgvrkgt ekpqftpipm sykelyqslf nahvvspyyl
      301 tplqppypkc mgvvkfddsp svenplpnht dkglnmisen mgegvktdia evktplkwvw
      361 keiarrglvi sgfekgwktk nycefhheig hkiqrceefr alvqsmmdnk emesykeake
      421 krsictsdsm trtpkinhpv viisrpknne arvqvtpnii iqkpatfsyk dsktvpwnye
      481 cnttipgkdt stepvngkss tveqkeekav eseplvnepi keeeakkflk flkhseysvv
      541 eqlhkqlvri svlalllsse vhrstlmkvl netyvanvis vskldrlvnn isvdnfiffs
      601 ddklldakgt rcqeflliig lr
//
LOCUS       XP_016706937             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706937
VERSION     XP_016706937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851448.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21676
     Region          69..154
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..181
                     /gene="LOC107921618"
                     /coded_by="XM_016851448.1:1..546"
                     /db_xref="GeneID:107921618"
ORIGIN      
        1 mnqllhqvvr tnnvphvrpp ssspvvpypq psitshrspl erirkyeaee fkgkkdddpi
       61 eaeewlensq wwttvmnihp aekinwnffv sefrkkyvsq lylekkkrkf ldlkqknmyv
      121 aeyelkfirl skytkelisn eadmcrrfew glneeiyvpl iplhlqefpi lvdraqrlee
      181 g
//
LOCUS       XP_016706938             224 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706938
VERSION     XP_016706938.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851449.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706938.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..224
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26009
     Region          64..194
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     CDS             1..224
                     /gene="LOC107921619"
                     /coded_by="XM_016851449.2:1..675"
                     /db_xref="GeneID:107921619"
ORIGIN      
        1 medvapkvsy rnklmgsqns tdpfqaledi evqegdvktk visgipsiif servhkfiek
       61 kmaktvvikl lgrkitfnai lniiktlwkt kspfqlmdle ndyylvqfnd eedvknvltk
      121 gpwvifgqyl tvrpwlsnfs ttqdevesqv vwmwlhglsk ryystfilqa irqaigpmvk
      181 tddnmenasr grikhrsrwk ktslvhrhri nrtykgelra ldac
//
LOCUS       XP_016706941             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706941
VERSION     XP_016706941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851452.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15437
     CDS             1..139
                     /gene="LOC107921621"
                     /coded_by="XM_016851452.1:1..420"
                     /db_xref="GeneID:107921621"
ORIGIN      
        1 marircltkk anksieehas satavcesep skpakkvvee ekereekdfd vnifaalesv
       61 ganienleld garptkvakv aspiqdatdd agaepeheeq fenyekskdk krklskdkte
      121 enkrrrkkhr aatamaadn
//
LOCUS       XP_016706942             222 aa            linear   PLN 06-AUG-2024
DEFINITION  codeine O-demethylase [Gossypium hirsutum].
ACCESSION   XP_016706942
VERSION     XP_016706942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851453.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="codeine O-demethylase"
                     /calculated_mol_wt=25736
     Region          1..>218
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..222
                     /gene="LOC107921622"
                     /coded_by="XM_016851453.1:1..669"
                     /db_xref="GeneID:107921622"
ORIGIN      
        1 mnqlvfgedf dlqleklhss ckewgffqlv nheikssile svkhevegfy klpleekmky
       61 kikecdfegy gtqekggkkf dwsdrlymtn npilrrkphl fpelpsslrn nmesyilelq
      121 elgtkllsli akalkideke mieyfedgmq sirmtyyppc pqlelvmgft pysdstllti
      181 lfqlngvdgl hirkdgawfp vsilpnalvv nvgdtlevky ff
//
LOCUS       XP_016706943             361 aa            linear   PLN 06-AUG-2024
DEFINITION  codeine O-demethylase [Gossypium hirsutum].
ACCESSION   XP_016706943
VERSION     XP_016706943.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851454.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706943.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..361
                     /product="codeine O-demethylase"
                     /calculated_mol_wt=41271
     Region          16..352
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..361
                     /gene="LOC107921623"
                     /coded_by="XM_016851454.2:1..1086"
                     /db_xref="GeneID:107921623"
ORIGIN      
        1 meaissiedk fnstfsvqel vkesiitipq hyvhldqqpp slgaappfqm lpiidmnqlv
       61 fgedfdlqle kfhstckewg ffqlvnhgik ssilervkhe vegfsklpfe ekmkykireg
      121 efegygtqer ggkkfdwsdr lymttnpilr rkphlfpelp sslrntmesy ilelqelgtk
      181 llsliakalk idekemieyf edgmqsirmt yypsspqskl vmgftphsds tlltilfqln
      241 gvdglhirkd gvwfpvsilp nalvinvgdi leiysngvyr siehkvvpns kkermsvaff
      301 inpkleadvg pspnlinpnn pplfkrvgme qcvqdffshk lnakaylqhm rindegndnp
      361 a
//
LOCUS       XP_016690863             189 aa            linear   PLN 06-AUG-2024
DEFINITION  codeine O-demethylase [Gossypium hirsutum].
ACCESSION   XP_016690863
VERSION     XP_016690863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835374.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="codeine O-demethylase"
                     /calculated_mol_wt=21962
     Region          16..>170
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..189
                     /gene="LOC107908109"
                     /coded_by="XM_016835374.1:1..570"
                     /db_xref="GeneID:107908109"
ORIGIN      
        1 meaissiedk fnstfsvqel vkesiitipq hyvhldqqhs spgaatpfqm lpiidmnqli
       61 fgedfdlqle klhstckewg ffqlvnhgik ssilerlkne vegfyklple ekmkykireg
      121 efegyrtqer gggkfdwhdk lymmtnpilr rkphlfpklp sslrntmesy ilddkallie
      181 ttnleglri
//
LOCUS       XP_016706945             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706945
VERSION     XP_016706945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851456.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31804
     CDS             1..274
                     /gene="LOC107921625"
                     /coded_by="XM_016851456.1:1..825"
                     /db_xref="GeneID:107921625"
ORIGIN      
        1 mplqnileve lfdvwgidlm gpfppswgni yilvavnyvs kwveamalpk ndansvlkyr
       61 vkhniattyh pqkngqvevs nreikqimek vvnptrkdws srldeafway htpfktplgm
      121 spfkllygkp chspielehk afwaikklnm dwinagnnri velnemkefk aqayknakly
      181 kkgtkrwhdk kilprqfepk qqvllfnsrl qlfpgklksc wsepfeiahv yphgavevkd
      241 mntgltfkvn gqqwknywga pitrdkhsia lqna
//
LOCUS       XP_016706946             219 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706946
VERSION     XP_016706946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851457.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..219
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25548
     Region          <1..76
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..219
                     /gene="LOC107921626"
                     /coded_by="XM_016851457.1:1..660"
                     /db_xref="GeneID:107921626"
ORIGIN      
        1 mgirvaierk ikmlkvygds alviyqlkge wetrdpklis ykklvlelid efdditfyyl
       61 preenkmada latlasmikv nkleimkpiq msiyevlanc ysikeegkdd hpwyqsilqy
      121 vknqkypdqa tennkrtlrr iaieyvldge vlykkgkyqv llrcvdamea rkileevhkg
      181 iygshangft marqimrfvy ylstiegdci syakkchkc
//
LOCUS       XP_016739610             154 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016739610
VERSION     XP_016739610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884121.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..154
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17448
     CDS             1..154
                     /gene="LOC107949467"
                     /coded_by="XM_016884121.1:1..465"
                     /db_xref="GeneID:107949467"
ORIGIN      
        1 mpnyvkymkd ilskkprlre fetvvltegc ttmlmnklpp klkdpwsfti pyfignhyvg
       61 kelcdlgaii nlmplsifkk lgiekarptt imlqladwsy ahpekieadq nvssilgipf
      121 satgrtlidv qkceltmran dqqmkmknvt pldl
//
LOCUS       XP_040942302             207 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942302
VERSION     XP_040942302.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086368.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23085
     Region          <1..42
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..169
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..207
                     /gene="LOC121213577"
                     /coded_by="XM_041086368.1:1..624"
                     /db_xref="GeneID:121213577"
ORIGIN      
        1 mestalngkm arwlillsef divyvsqkav kgsaigdfla sraledcepl sfdfpnedlm
       61 ciaateenpq eshgwrlnfd gasnavgngi gavlvspnai ergikvlevy gdsalviyql
      121 rgewetrdpk lisyrklvpe likeykditf cylprdenqm adalailasm iklnghgdmk
      181 siqmsiyedp ahcynieege iddipwy
//
LOCUS       XP_040942303             284 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942303
VERSION     XP_040942303.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086369.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..284
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32542
     Region          <1..42
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..>149
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..284
                     /gene="LOC107949470"
                     /coded_by="XM_041086369.1:1..855"
                     /db_xref="GeneID:107949470"
ORIGIN      
        1 mestalngrm arwqillsef divyasqkvv kgsaiadfla sraledyepl sydfpnedll
       61 yvaateespq eghswklnfd gasnavgngi gailvspney eaciigiraa ierkikvlkv
      121 ygdsalviyq lrgewetrdp klvsyrksvn rhedmkpiqm siyedpahcy nieegeidds
      181 pwykdilryv knreypsqat gnekrtlrrl aidyvldeei lyrrgkdqvl lrcvdaveak
      241 kileevhegi ygthasgftm akqimrrvfe klyreiqsrd iwgt
//
LOCUS       XP_016707055             192 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF024 [Gossypium
            hirsutum].
ACCESSION   XP_016707055
VERSION     XP_016707055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851566.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..192
                     /product="ethylene-responsive transcription factor ERF024"
                     /calculated_mol_wt=20759
     Region          36..94
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(37..38,40,42,44,46,50,52,59,61,64)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..192
                     /gene="LOC107921749"
                     /coded_by="XM_016851566.2:1..579"
                     /db_xref="GeneID:107921749"
ORIGIN      
        1 mmfeskalkg llvsalaeee ghqrwqfitt grhpvykgvr rrssgkwvse ireprkpnri
       61 wlgtfptaem aaiaydvaal alkgqdaeln fhnsaaslpv pastsprdiq aaatsaatal
      121 gaandalrnn siappekpsm addfvdedli fdmpnvlsnm aegmllsppr fdadqppann
      181 ggdddenlwk fp
//
LOCUS       XP_016706928             348 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706928
VERSION     XP_016706928.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851439.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706928.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..348
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39770
     Region          80..204
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(85..88,118..120,123,147,187,201)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..348
                     /gene="LOC107921609"
                     /coded_by="XM_016851439.2:1..1047"
                     /db_xref="GeneID:107921609"
ORIGIN      
        1 mysglrtprr ktteeilgnl ninaifeees eegstsgsai aeflasrald dneplnfdfp
       61 nedlmyvatv ekdfqeggpw klsfdgasnt igneigailv spsgdyypft ikldfdytnn
      121 maeyeacimg iraaierkik vlevygdsal viyqlkgewe trdpklvryr klvmelieef
      181 dnvtfsylpr denqmadala tlasmfkvnk ledmkpiqis ifeapahccn idneeekddh
      241 pwyhdilqyv ksreypdhat endkktlrrl aidyvldgei lykkgkdqvl lrcvdaveak
      301 eileevheve qieatngeps fpniaarrlk pqrrilfpqr drvktgls
//
LOCUS       XP_040942305            1356 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942305
VERSION     XP_040942305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086371.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1356
                     /product="uncharacterized protein"
                     /calculated_mol_wt=155619
     Region          121..219
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          311..327
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     Region          391..480
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(405,407,409,434..436,475)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            405..407
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            405
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(434..437,441..444)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          602..778
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            order(665..670,699..700,727,729..730,774..775)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     Site            order(665..670,699,729)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238825"
     Site            700
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     Region          856..963
                     /region_name="RNase_HI_RT_Ty3"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; cd09274"
                     /db_xref="CDD:260006"
     Region          1020..1079
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     CDS             1..1356
                     /gene="LOC121213579"
                     /coded_by="XM_041086371.1:1..4071"
                     /db_xref="GeneID:121213579"
ORIGIN      
        1 mlrnelesin erldrveggp tregtpqglr rergrarpfv ddpfepseee sdqaldqner
       61 rrgqknrgpr drgqvdddlk giklsippfy gksdpeayle werkievife chnyseskkv
      121 klaaiefsdy amvwwdqltt srrrngewpi sswtemkavm rkrfipsyyy relyqklqnl
      181 tqgnrsvedy fkemeiamir anvdedreat marflaglns dianvvelqh yvevvdmvhv
      241 aikvekqlkr kgtsrtfpst nnfqrwnqgt gkkdfsnrtk dhplsskvsk pigetskgke
      301 vvmpnrsrei kcfkclgrgh iasqcpnrtn milrangeie seedddeepd gtaeeedele
      361 yavdgeilvi krslslqsve neqqrenify trchvqgkvc slivdggsct nvastlmvek
      421 lglptskhpq pyklqwlndg gelkvtkqvl vpftigkyfd kvlcdvvpmh aghmllgcpw
      481 qfdrkaihdg ftnrytfkfe gknvtlvpmt prqqsvlvlm yketllntne ldpnlsssiv
      541 sllqefedvf pedipnglpp irgidqidfi pgasipnrpa yrtnpeetke lqkqvnelme
      601 kgyireslsp cavpillvpk kdgtwrmcvd cravnkitik yrhpiprldd mldelsgaqi
      661 fskidlksgy hqirmregde wetafkmkhg lyewlvmpfg ltnapstfmr lmnhvlrsfi
      721 gkfcvvyfdd lliysnsled hllhlksvld vlrkeslfan lkkctfctnk viflgfvvns
      781 eglevdqekv kaiqewprpt sisqvrsfhg lasfyrrfvp nfstlaaplt svikkssafy
      841 wneeqeksfi alkscvgiga vlmqdgrpva yfseklngav lnyptydkem yaliraletw
      901 qhylwpkefv ihsdhealkh ingqaklnkr hakwveyles fpyiikykkg kenivadals
      961 rrytllsyld skllgfaflk elynddvdfg diykscenka vdkfyrfdgf lfregklcip
     1021 qssirkllvi eahggglmgh fgvaktfstl qehffwpgmr keveqicshc itckkakski
     1081 nphglykplp ipdapwvdls mdfilglprt ktgkdsifvv ggcttsrnsk nhrirsrrkv
     1141 pksflevsmg karnetvvfn nlsspngwtn gdllplprdq lvhtdakrka dyvkqlhqkv
     1201 rtnievrteq ymraankgrk qivfepgdwv wvhmrkerfp aqrrskllpr gdrpfqvlqr
     1261 inensykldl pgsdlgtnrl eeggndaiep helssandvs lklpkgpitr arakkfkdti
     1321 salvdrvwge svasllensw tskmsksctl lqalpa
//
LOCUS       XP_040942306             589 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942306
VERSION     XP_040942306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086372.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..589
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67905
     Region          61..>134
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(75,77,79,104..106)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            75..77
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            75
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(104..107,111..114)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          <221..259
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          353..468
                     /region_name="RNase_HI_RT_Ty3"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; cd09274"
                     /db_xref="CDD:260006"
     Site            order(357..360,389..391,394,419,452,466)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260006"
     CDS             1..589
                     /gene="LOC107963012"
                     /coded_by="XM_041086372.1:1..1770"
                     /db_xref="GeneID:107963012"
ORIGIN      
        1 mvvrtdgeie feeenknepe mpsdeeedle lpiegeilvv krslnilntk ieqtkrnifh
       61 trchiqgkvy smsinggsct nvaskmlvek ldlitnkhpn pyklqwlndg relkvtkqvv
      121 iafsiekyqd evefedvfse evprglpplh giehqidfvp katipnrtac rsnleetkel
      181 qrqvadlmek gyiweslspc vvsvllvpkk dgswkiklla dhiehlrail evlrkevlya
      241 nlkkcnfctd kvaflgfvvs aeglevdqek ikaiqewprl mtisqvrsfh slasfyrrfv
      301 snfntiatpl tciikknspf twndeqevaf nkikncltna pllslpdfnk tfevecdasg
      361 igigavltqd rwsiayfsek lngatpnypt ydkemydlir vletwqhylw pkefvihtdh
      421 ealkhlkgkt klnkrhakwv eflesfpyvi kykqgkenvv vdalsrrfal inhldskllg
      481 faylkdlyvn dpdfgyqqrl wmeelflepg kkdvqkhdyg lmlekaittd dpkhgvtsnk
      541 fgvanttdve viktkylvim yercnlvfak pisfeeaanv pewidamka
//
LOCUS       XP_016732887             415 aa            linear   PLN 06-AUG-2024
DEFINITION  equilibrative nucleotide transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016732887
VERSION     XP_016732887.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877398.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732887.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..415
                     /product="equilibrative nucleotide transporter 1"
                     /calculated_mol_wt=45680
     Region          12..393
                     /region_name="Nucleoside_tran"
                     /note="Nucleoside transporter; cl15430"
                     /db_xref="CDD:472807"
     CDS             1..415
                     /gene="LOC107943625"
                     /coded_by="XM_016877398.2:1..1248"
                     /db_xref="GeneID:107943625"
ORIGIN      
        1 medkfnlgyi iyftlgigfl lpwnsfitav dyfsylypea svhrvftvvy mvvglacllv
       61 ivfyahkska ymqinvglgi fvvsllvvpv mdavyikgqv glydkfyvtv gllalagigd
      121 alvqggligv agelperymq aiiagsggsg vlvsmlrilt kavfpqdadg lrksaylyff
      181 tsivfmvici vlynvahklp imqyyeelka eavkeekakk glmtgpvwra tlwnivgtvk
      241 wygfgivliy fvtlsifpgy itedvhslvl kdwypvllit gynvfdlvgk sltavyllen
      301 akvaisacvv rllffplfig clhgpqlfrt efpvslltcl lgltngylts vlmimapksv
      361 qiqhaetsgi vmvfflvvgl asgsviawfw vigssakisp tggryefvlm mclpl
//
LOCUS       XP_016732123             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732123
VERSION     XP_016732123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876634.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20767
     Region          <2..60
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          119..176
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     CDS             1..179
                     /gene="LOC107942902"
                     /coded_by="XM_016876634.1:1..540"
                     /db_xref="GeneID:107942902"
ORIGIN      
        1 mydkefvihs dhevlkhikg qhkqgkrhak wveylesfpy itkykkgken ivadalsrsy
       61 tllsyldskl lgfalvkdly atnddfgelf vacenvavdk fyrcdgflfk egklcvprss
      121 vrellvnevh irglmghfdv ektlatlqeh fywpkmkrdv ervcvrcvtc kkakskvkp
//
LOCUS       XP_040942307             387 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_040942307
VERSION     XP_040942307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086373.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..387
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=43514
     Region          <1..143
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          230..369
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(234..237,272..274,277,311,337,364)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..387
                     /gene="LOC121213580"
                     /coded_by="XM_041086373.1:1..1164"
                     /db_xref="GeneID:121213580"
ORIGIN      
        1 mlpphgfshd stkvcklhks iyglkqasrq wfskltkali slgyiqsttd hsmftkkhse
       61 dftvlliyvd diiltgtssp eimkvkqfld ttfrikdlgd lkyflvleva rtsqgihisq
      121 qkyalkilqe sgfieckpak tpmatksvyk ltstdgells ditsyrqlvg kllyltstrp
      181 dltfavqqls qfmdkpttnh lqaahrvlry lkgcpstglf ypasssfelk afsdsnwagc
      241 petrrsitgy ciffgealis wrakkqptvs rssseaeyra lasticevqw lhyllcdlhv
      301 pishatpvfy dnkstiqias nptfhectkh ieidchivre klqkdvvhll pctsstqlad
      361 lftkalaaqp fqdmisklgm lnihspa
//
LOCUS       XP_016747098             261 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016747098
VERSION     XP_016747098.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891609.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29991
     Region          38..176
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     Region          178..220
                     /region_name="zf-CCHC_4"
                     /note="Zinc knuckle; pfam14392"
                     /db_xref="CDD:433930"
     CDS             1..261
                     /gene="LOC107955812"
                     /coded_by="XM_016891609.1:1..786"
                     /db_xref="GeneID:107955812"
ORIGIN      
        1 mvnleedfel qdgdvttvlv dgvpsiiffd rvqqfiawkm alivvvklvg kkigfktlfn
       61 kvsslwkprg qfqlmdlend fylirfldkd dfdkilmggp wvifghylti rpwsldfsat
      121 nkevdnqivw irllglsegy ylkmllrair kaiglviktd ehtnaairgr farlvvcvdl
      181 rkpliskvqi ngktqrveye ylpniyftcg lyghttafcl gknigmmenp tdttapvtee
      241 sdlinrveke pfgpwmller k
//
LOCUS       XP_016706927             134 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like
            [Gossypium hirsutum].
ACCESSION   XP_016706927
VERSION     XP_016706927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851438.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG3-like"
                     /calculated_mol_wt=14922
     Region          <33..102
                     /region_name="Lysine_decarbox"
                     /note="Possible lysine decarboxylase; pfam03641"
                     /db_xref="CDD:397621"
     CDS             1..134
                     /gene="LOC107921608"
                     /coded_by="XM_016851438.1:1..405"
                     /db_xref="GeneID:107921608"
ORIGIN      
        1 mdlkftsrfw kslqetlgsk lnlstayhpq tdggygtlee lleviawaql gihdkpvgll
       61 nvdgyynsll sfidkaveeg fispsareii vsaptakklv kkleeyvpch esvasnlswe
      121 meqfgyskty dlsk
//
LOCUS       XP_040942308             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942308
VERSION     XP_040942308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086374.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31193
     Region          <35..148
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     CDS             1..274
                     /gene="LOC121213581"
                     /coded_by="XM_041086374.1:1..825"
                     /db_xref="GeneID:121213581"
ORIGIN      
        1 mdtsenvfis fkmheqsgai sllnesngsg ngasvdyvsk wieakatrnd naktvvdflk
       61 ssifsrygtp ralisdrgth fcnklvsalm ekygvtqria tayhpqtngq aevsnreiks
      121 ilektvkpnr knwslrlnda lwayrtaykg pidmspyrlv fgkpchlpve lehkafwavk
      181 qcnmemetag raqkldiqel eeikndayen arvykektka fhdkmikpsl rkktnwplfl
      241 aakndqtpsf qlflpnipsy svqidsvwri hkps
//
LOCUS       XP_040942309             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942309
VERSION     XP_040942309.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086375.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26636
     CDS             1..239
                     /gene="LOC107948537"
                     /coded_by="XM_041086375.1:1..720"
                     /db_xref="GeneID:107948537"
ORIGIN      
        1 mstsavevsd eknpikrtvd asdewwesrl qvvpeakkfr tsgidpefeg kldqmfmgiv
       61 atgdkawaps sgtlltdffe dvnneipeen eeenmkndvh isndvqissd vhisndvqid
      121 gtsqkrknpe mssshfktgr kksskqigga arlssqiekl cnaadnmsqa tssltpimdp
      181 fgipqavkml dsmseevlea splyffalrl lvnkdkrimf lsinpkiral wlktemeds
//
LOCUS       XP_016706823             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706823
VERSION     XP_016706823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851334.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23518
     Region          171..>211
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            186..188
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            186
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     CDS             1..211
                     /gene="LOC107921486"
                     /coded_by="XM_016851334.1:1..636"
                     /db_xref="GeneID:107921486"
ORIGIN      
        1 meklvsnvse nqvgqianal nsrtqetlps dtvnarphrk ehckaitlrs gtqldrffks
       61 vvaetsnles dqskileqhk ksttnektgp sdakanfdst vehniwakqs lqpevrpplp
      121 fpqrfqnheq dqqfrkrrlr efettaltkg cttmltnklp pklkdlgsft ipcsignqyv
      181 gkalcnlgas inlmplsmfk klgigearpt t
//
LOCUS       XP_016706821             396 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706821
VERSION     XP_016706821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851332.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..396
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44722
     Region          <2..70
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     Region          170..297
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(201,203,228..230,269)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            201
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(228..231,235..238)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..396
                     /gene="LOC107921485"
                     /coded_by="XM_016851332.1:1..1191"
                     /db_xref="GeneID:107921485"
ORIGIN      
        1 mwdffkvtfq gkymgasyvd arrkeflcsi qgnktvaeyk aeflrlrlya hgivaneyec
       61 fvrfegglwd elrvliapqr erdfaslvek vkvtedmkrs ehqncekdrg gykkdlepss
      121 farrhkkkar fdrpiqvgvs varpqscadc wrhhlgrgvg nievrqpalv yaahhrkdgd
      181 aldvitgtfl ihnvpytvli dithsyvact vsgtlgtmce ntvnemivls pmgqsvkvdk
      241 llrdgpleve riifladlme lpfgefdlil gmnllvkhra sldytakrmv lktiegeevt
      301 vigerrnfls nvistlrakk lvrksceafl ayigtfnseg psigdirtik dfsdvfpdel
      361 pglppnrevk fgiellpgta pvsiapyrma pkemve
//
LOCUS       XP_016706817             166 aa            linear   PLN 06-AUG-2024
DEFINITION  ribosomal RNA-processing protein 17-like [Gossypium hirsutum].
ACCESSION   XP_016706817
VERSION     XP_016706817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851328.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="ribosomal RNA-processing protein 17-like"
                     /calculated_mol_wt=19009
     CDS             1..166
                     /gene="LOC107921480"
                     /coded_by="XM_016851328.1:1..501"
                     /db_xref="GeneID:107921480"
ORIGIN      
        1 maifwadver rdvaikrslq knltrpmpef rsfpkelnsd ldeeeeeaed drtksvvias
       61 dnegkevdnp pstlpaddtt dvpplsteqm teqdrhinkl mdnltksddv pihslkrsca
      121 tstmranrlt pmkvfhqcik ggiptskeyp fdpeiertlr rrrkev
//
LOCUS       XP_016706816             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706816
VERSION     XP_016706816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851327.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18514
     Region          63..142
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(65,67,69,93..95,137)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            65..67
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            65
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(93..96,100..103)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..164
                     /gene="LOC107921479"
                     /coded_by="XM_016851327.1:1..495"
                     /db_xref="GeneID:107921479"
ORIGIN      
        1 mpnyvkfmkd mlskkrqlee letialteww namltnkltp klkdpnsfti pcstgiqnig
       61 kglcdlaani nlkplsmfkq lgigearptt mtlqlldqsy ahplgkiedv lvkvdkfifp
      121 tdfivldcea dkevpiilgr pfnvigrtvi hvqkreltmr vndq
//
LOCUS       XP_016706924             350 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 102A-like [Gossypium
            hirsutum].
ACCESSION   XP_016706924
VERSION     XP_016706924.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851435.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="coiled-coil domain-containing protein 102A-like"
                     /calculated_mol_wt=41280
     Region          145..>340
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..350
                     /gene="LOC107921604"
                     /coded_by="XM_016851435.1:1..1053"
                     /db_xref="GeneID:107921604"
ORIGIN      
        1 mailqnlqee diewkapwll pdeilyrcgn fdwvpllgiw gaigyapllv lrqyrsrqfi
       61 patqglaece fsyggdrykk rirevsnawn qtrqmkrlav gpmttseyde wrvrrvndni
      121 skssyegkle kqieqieeek tnlrldadvq klemerlrkg karaeedlds lktdykklrs
      181 smktaglgkt seqwckeiqe eknkadrwer rfqevqtqne tlkrslsenq kekgelenrv
      241 seleeslhrh rnrnsvmelk aslnrieemk grieeleaal rsceiriehl esnedrqdeq
      301 lhyfqnqvrd ryhimgeavl qiqevadhlq tlavqadvls mkyelessrg
//
LOCUS       XP_016706923             188 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706923
VERSION     XP_016706923.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851434.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22026
     CDS             1..188
                     /gene="LOC107921603"
                     /coded_by="XM_016851434.1:1..567"
                     /db_xref="GeneID:107921603"
ORIGIN      
        1 mqntvvfsel sesklvgtnl ihdmedklwi ihdylkatld lqksyanlkg kdiefavgdq
       61 vflkvspwkk vlqfdrkgkl sprfikpyei ierigrvayr lvlppklkki hnifhilmlr
      121 ryrsdptyvi tpceveiqpn lsyseeavki larkvkelrn krmslvkdlw nrhgveeatw
      181 eteesmks
//
LOCUS       XP_040942310             231 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942310
VERSION     XP_040942310.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086376.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..231
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26308
     CDS             1..231
                     /gene="LOC107945918"
                     /coded_by="XM_041086376.1:1..696"
                     /db_xref="GeneID:107945918"
ORIGIN      
        1 meqhrpnvnl fsrrknqgsc weaakvaklk agsnqyqtvg fssevfppat ydeetssevv
       61 pssssvslsd qdlnmqnqng sdlqfnhghf welvqalqav dstkdqrtii syvsklrvyl
      121 gkfafiigag ikeclqkkpa dqednfsrda inmfdlmkrl hsqlepsytf wrimkimhlm
      181 klvttvtwkr evvrvrkvvr arsqlqksls irnpkgtiil rknksggqkp e
//
LOCUS       XP_040942311             679 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942311
VERSION     XP_040942311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086377.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..679
                     /product="uncharacterized protein"
                     /calculated_mol_wt=75653
     Region          <158..214
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     Region          338..426
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(352,354,356,379..381,420)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            352..354
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            352
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(379..382,386..389)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          564..>676
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            order(627..632,661)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238825"
     Site            662
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     CDS             1..679
                     /gene="LOC121213584"
                     /coded_by="XM_041086377.1:1..2040"
                     /db_xref="GeneID:121213584"
ORIGIN      
        1 mskevegmet rgrarkasrs rdilsaledr vvtlessmgd ikervedvdd rlhdglqsmq
       61 eqlkeyvtdn mkqltgrdda ieamvvalkg eiaelkgelt iyevalgngg laaaapkpni
      121 dvpkpkefkg tssardvdnf lwgieqyfca kgitedvtkf ypeyaedear arlrrlaqqg
      181 tvreyvqefs elmlqisdmg ekeaffsfmd glkpwakqel qrrgvqeltk amsvaeslae
      241 fggrkdnsns skprlkgnsg gdkerptrng dgkkpwdkrk sgpircfhce gphmikdcpk
      301 kaalkaveak gesdvednnl gsilggvedr mshglmfvdi ivagrklnal vdtgasdlfm
      361 seeaacklgl kidneggrik tvnsesipik gvakgvdlql gnwsgkvsik viplddydfv
      421 vrlsfldqvk aliapssnym visdakhqcm vkvtrkrsfe gktlsaiqfa kgvrrnevsy
      481 latlkieeta efvsetpkev gqllqsfrdv mpaqlpkslp pkrevdhrie lvsnvvppar
      541 apyrmsppel eelqkhlkel ldagfirpsk spygapvlfq kkhdgslrmc idyralnkit
      601 vknrypipli adlfdqlgst rwftkldlrs gyhqvriveg depkiacvtr ygsyeflvmp
      661 fglmnapatf ctlmnkqva
//
LOCUS       XP_016706919             227 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione S-transferase U9 [Gossypium hirsutum].
ACCESSION   XP_016706919
VERSION     XP_016706919.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851430.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706919.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..227
                     /product="glutathione S-transferase U9"
                     /calculated_mol_wt=25929
     Region          7..80
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(15,17,42,55..56,68..69)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(20,27,74)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(64..65,68,74,78)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          91..215
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(92,94,98,106)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(98,105,157..158,161,203)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(105,110..111,114..115,117..118,162,165,209,212)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..227
                     /gene="LOC107921598"
                     /coded_by="XM_016851430.2:1..684"
                     /db_xref="GeneID:107921598"
ORIGIN      
        1 mekqnkvlll giwaspytkr velalklkgv syeyveedmf nksplvfkyn pihqrlpilv
       61 hngnpivesl viieyidetw kngppilpad pykksqlrfw atfihqsqlf etmvkvlksd
      121 geeqekdink mletikvlee glkdifpddn nvgyldfvic svfsfhvame evlgikmvds
      181 ektpllhswv tklnhlalvk etmapnhilv evlkvvrqka lkaasat
//
LOCUS       XP_040942312             183 aa            linear   PLN 06-AUG-2024
DEFINITION  BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
            [Gossypium hirsutum].
ACCESSION   XP_040942312
VERSION     XP_040942312.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086378.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..183
                     /product="BRASSINOSTEROID INSENSITIVE 1-associated
                     receptor kinase 1-like"
                     /calculated_mol_wt=20674
     Region          <2..>137
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <131..>183
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..183
                     /gene="LOC107921895"
                     /coded_by="XM_041086378.1:1..552"
                     /db_xref="GeneID:107921895"
ORIGIN      
        1 malgsclrer pesqapldwa vrkqialgaa rglaylhdhc dpkiihrdvk aanilldeef
       61 evvvgdfgla klmhykdthv ttavrgtigh iapeylstgk slektdvfgy gvmllelitr
      121 qrafdlarla ndddvmqplp lraaqdlirf lhqpvyhsqr fklwlsyfei yggklfdlls
      181 drk
//
LOCUS       XP_040942313             160 aa            linear   PLN 06-AUG-2024
DEFINITION  valine--tRNA ligase, chloroplastic/mitochondrial 2 [Gossypium
            hirsutum].
ACCESSION   XP_040942313
VERSION     XP_040942313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086379.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="valine--tRNA ligase, chloroplastic/mitochondrial
                     2"
                     /calculated_mol_wt=18326
     Region          <17..138
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..160
                     /gene="LOC107921015"
                     /coded_by="XM_041086379.1:1..483"
                     /db_xref="GeneID:107921015"
ORIGIN      
        1 mcffisatha wdlcfcflhg yieaskariy hsgddsvalv aqtvllyvfe nilkllhpfm
       61 kfvteelwqa lpnrrealii sfwpqtslpr stdlvkrfen lqvltrairn aiaeysvepa
      121 kritasivgs eeviqyisiv gyaglsfesg eqrwqrrrip
//
LOCUS       XP_016706911             212 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706911
VERSION     XP_016706911.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851422.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24301
     Region          <1..129
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(6..11,26..27,55,126..127)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(6..11,26,55)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            27
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
     CDS             1..212
                     /gene="LOC107921591"
                     /coded_by="XM_016851422.1:1..639"
                     /db_xref="GeneID:107921591"
ORIGIN      
        1 mavkldmska ydrvewtflk evllrmgfae ewvslilrcv sivsytvnin grrgdvfkpt
       61 rglrqatknk akilkdilke yekcsgkcvn fskstiffss ntvegdkati siemgirrst
      121 nmekylglpn vvgkqkkesf qnlkdrikqg venwstrfls qggkevfiks vlqaipayam
      181 acfllpkslf gefenlfarf wwqkcqrkkg ih
//
LOCUS       XP_016706912             186 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016706912
VERSION     XP_016706912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851423.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..186
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=20867
     Region          41..141
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..186
                     /gene="LOC107921592"
                     /coded_by="XM_016851423.1:1..561"
                     /db_xref="GeneID:107921592"
ORIGIN      
        1 myssspldig qqapvtgipv aptnqqyptq rytptavkvp wstglydcta dvpnccltcw
       61 cpcitfghia divsqgsisc rasgaffvll siltvcisnr iysytyrarl rsqyileesp
      121 crdcylhfwc eacalcqeyr elknrgfdvs lgwhgnwerq kilgvpmpmp mpmpmapaem
      181 etgmrr
//
LOCUS       XP_016706913             188 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016706913
VERSION     XP_016706913.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851424.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=21007
     Region          56..154
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..188
                     /gene="LOC107921593"
                     /coded_by="XM_016851424.2:1..567"
                     /db_xref="GeneID:107921593"
ORIGIN      
        1 mangsktrwd vlaakinklk fllfifisfi lncnfilpkf lnheppirqp qnelpwsagf
       61 cdccsdlktc cisywcpcit fgqiaeivdk gstscgasga lytlimfitg cgclysccyr
      121 sklrkqynlk ggdcgdcmrh fccepcaltq eyrevqnrgf dmsigwhanv eknpgremap
      181 avekgmsk
//
LOCUS       XP_040942314             176 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_040942314
VERSION     XP_040942314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086380.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..176
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=19223
     Region          44..142
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..176
                     /gene="LOC121213585"
                     /coded_by="XM_041086380.1:1..531"
                     /db_xref="GeneID:121213585"
ORIGIN      
        1 mvtikialtc stggtnrsnh lvtlavdkce wqivqltasn elpwsagfcd ccsdlktcci
       61 sywcpcitfg qiaeivdkgs tscgasgaly tlimfitgcg clysccyrsk lrkqynlkgg
      121 dcgdcmrhfc cepcaltqey revqnrgfdm sigwhanvek npgremapav ekgmsk
//
LOCUS       XP_040942315             170 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_040942315
VERSION     XP_040942315.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086381.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=18887
     Region          41..139
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..170
                     /gene="LOC121213586"
                     /coded_by="XM_041086381.1:1..513"
                     /db_xref="GeneID:121213586"
ORIGIN      
        1 manaqipsfi fisfilncnf ilpkflnhep pirqpqnelp wsagfcdccs dlktccisyw
       61 cpcitfgqia eivdkgstsc gasgalytli mfitgcgcly sccyrsklrk qynlkggdcg
      121 dcmrhfccep caltqeyrev qnrgfdmsig whanveknpg remapaveka
//
LOCUS       XP_040942316             380 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: protein bicaudal D homolog 1-like [Gossypium
            hirsutum].
ACCESSION   XP_040942316
VERSION     XP_040942316.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086382.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 14% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..380
                     /product="LOW QUALITY PROTEIN: protein bicaudal D homolog
                     1-like"
                     /calculated_mol_wt=43661
     Region          <12..>167
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..380
                     /gene="LOC121213587"
                     /coded_by="XM_041086382.1:1..1143"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121213587"
ORIGIN      
        1 mrtvglgkts kqwreeiree rnksdrwerk frevqaqnea lekslsesqk ekrelkdrvv
       61 elegslrqyr srnsvlelka slskieemkg kieeleaalq icevriehle akegrqneql
      121 hyfqdqvinr drvmgeamvq irevadhlqt lavqadtltg elekrkdlid hsevdnedfa
      181 yfldctptsv qvsxdrhqqg alftirsqqy rtgtttpvsg ltvprsnlrn nflvarddpv
      241 emkqvraeyp dtieaprkke nrgnntnryn kghskpiivg rsktettrrr splkqesgvk
      301 penciafkkp verfikigiv kfdeassakn lllnhtdneg damneemlgn vhisaeyeea
      361 treeilldvr pyklgsvlnn
//
LOCUS       XP_040942317             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942317
VERSION     XP_040942317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086383.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15101
     CDS             1..135
                     /gene="LOC121213588"
                     /coded_by="XM_041086383.1:1..408"
                     /db_xref="GeneID:121213588"
ORIGIN      
        1 mvqnkndlar hcnglqttsf likqkypnqq gfpifptklk gqsslslcrk ratplqlrfr
       61 rseqgpttcf ekvflsaffc rrcgqrrqgf avlvqvgdas gdecagvtwa atthrkggnp
      121 ripwcclvfg lywav
//
LOCUS       XP_040942318             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942318
VERSION     XP_040942318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086384.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16523
     CDS             1..136
                     /gene="LOC121213590"
                     /coded_by="XM_041086384.1:1..411"
                     /db_xref="GeneID:121213590"
ORIGIN      
        1 mgrksreelk dsrllfkfna cwakekeakd likhawdnne tniiesierv rrvlgpwqyr
       61 ryrrmkshic rlvdqskrli ngpyldfkvd mlkdshtelr rlypeeesyw eqrshiqwlk
      121 egdrntyfsm fgllvg
//
LOCUS       XP_040942319             133 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942319
VERSION     XP_040942319.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086385.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14879
     Region          <4..>121
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          <66..>131
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     CDS             1..133
                     /gene="LOC121213591"
                     /coded_by="XM_041086385.1:1..402"
                     /db_xref="GeneID:121213591"
ORIGIN      
        1 mpksirilia iaaynyyeiw qmdvknvfln gnlledvymt qlegfvqpkn sgkacklqrs
       61 iygsnwkssk qrtivdsttq agyisasdta keavwikkfi sdlgvvpsit nhvdvycdny
      121 gaiaqakepr syq
//
LOCUS       XP_040942320             349 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942320
VERSION     XP_040942320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086386.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..349
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39850
     Region          44..175
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..349
                     /gene="LOC121213592"
                     /coded_by="XM_041086386.1:1..1050"
                     /db_xref="GeneID:121213592"
ORIGIN      
        1 mktyleaidl wevvekdsei pilpinptva qiktqkktmk skaksclfaa vsptiftrim
       61 slkstkeiwd ylktkyegne rirkmqvlnl vhdfelqkie eietinecsd rllniankvr
      121 llgsslensr ivekilvtvp erfeatittl entkdmlkit lakllsalqa qeqmrvmrqk
      181 ravegalpik yqdygknmrs nnkkfhiasg essafgnksk tgnrrsevkk dyppcqhcgk
      241 kghpsfnhet senwlinsgc inhmthdkel fkelkstksk kvrignddyi vvkgkgtiai
      301 tscsdtkfit dvlfvldidq nllsvgqlve krfkvnfmek trmiedatr
//
LOCUS       XP_016707056             181 aa            linear   PLN 06-AUG-2024
DEFINITION  putative uncharacterized protein DDB_G0271982 [Gossypium hirsutum].
ACCESSION   XP_016707056
VERSION     XP_016707056.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851567.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="putative uncharacterized protein DDB_G0271982"
                     /calculated_mol_wt=21040
     CDS             1..181
                     /gene="LOC107921750"
                     /coded_by="XM_016851567.1:1..546"
                     /db_xref="GeneID:107921750"
ORIGIN      
        1 macplgcrgc nddwrvvess sngvstpyrn llknqgltfe frfvakgskl qgtfesivsk
       61 gkkvkkeelh fkakvkdmep nyekekkitk svekekskhk edkgqkhkek dkekhedsei
      121 gemknneekk knnekmhkde egdentekkk erdkeaemkk egnhedkevv keekkkkike
      181 a
//
LOCUS       XP_016706827             357 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706827
VERSION     XP_016706827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851338.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..357
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40935
     CDS             1..357
                     /gene="LOC107921494"
                     /coded_by="XM_016851338.1:1..1074"
                     /db_xref="GeneID:107921494"
ORIGIN      
        1 mvnklaanvl dfqqqtlnfq ketkdfqqkt easireltts iekltaqekl psqtepnprr
       61 nanavtlrse kcrrgkedke iletfrnvei niplldaiwk ipqyakflkd lctnkrkltg
      121 nervnvgenv savlqqkipa tckdrgmsvv hpegvlddvl vkanklifpa dfyvikmeed
      181 stprssdlll grpfhikast kidalelelk plpehlkyaf lgksntlpvi isnrlsthee
      241 eslihvlksh keaigwtiay lkgislltct hriyleedkk lrreaqrwin pnmieppgkl
      301 rsrwqgpfiv tevfthgvie ieseesgkwf vvnsqrlkpf yenfqahmvv kihlepp
//
LOCUS       XP_040942321             375 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 [Gossypium hirsutum].
ACCESSION   XP_040942321
VERSION     XP_040942321.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086387.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..375
                     /product="glycosyltransferase BC10"
                     /calculated_mol_wt=43603
     Region          107..375
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..375
                     /gene="LOC121213593"
                     /coded_by="XM_041086387.1:1..1128"
                     /db_xref="GeneID:121213593"
ORIGIN      
        1 mkvakewrlg smgdtkilpg srhrsplkrp iwiilmvsfv slflvcayiy ppnsdvacyv
       61 fssrgckvlt dwlpppkrel tdeeiisrvv vrdildtppv esknpkiafm fltpgslpfe
      121 klwdmffrvg hftsfcvqel pnmneshmyf ilvknisfvd cqckyvnvyg eernsnnfgn
      181 egrfsvyiha skekpvhvsp yflnreihss pvtwgafsmv daerrllaya lkdldnqhfv
      241 llsdsciplh nfdyvynylm hanmsfidcf vdpgphgngr ystrmlpeve ekdfrkgaqw
      301 ftmrrqhall vmadslyysr frdycrpfad gknciadehy lptffnlvdp ggianwsvtr
      361 vdwserkwhp ksyra
//
LOCUS       XP_016706830             596 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706830
VERSION     XP_016706830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851341.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..596
                     /product="uncharacterized protein"
                     /calculated_mol_wt=66510
     Region          463..544
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(466,468,470,496..498,537)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            466..468
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            466
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(496..499,503..506)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..596
                     /gene="LOC107921497"
                     /coded_by="XM_016851341.1:1..1791"
                     /db_xref="GeneID:107921497"
ORIGIN      
        1 mamlfintlk asfithmlgs atksfsdiam ngemiesair sgkidvgenn rrqaskkkes
       61 evnnvntynk svtvnqprkp pypkwydana qcdyhagitg hsiehcttfk slveklismg
      121 vvkvddasgt gnllpnhtds gvnmmsenvg rrvkesvaki kiplmwvwke mvrrglivsg
      181 seegcetsdy yefhhevghk iqkygefkal vqsmmdnrev effeeveekg stcasksmsr
      241 ipkvnhpvni isrpkvnear vqvtpkiviq klakfsykds kkvpwnyecd vtvsrkeasv
      301 svakenekig sctntekhcg wmnsqaesae gkvftaeqke ektvesrpli nepineeeat
      361 eflkflkhse ysvveqlhkq parisvlpll mssevyrntl mkvlnetyva ndisiskldl
      421 lvnnisadnf nffndneips ggmgstkaly ittrckgyml sgvlidngsa lnvlplsiln
      481 rlpvdsshmk mcqnvvrafd gterkvmgri eiplqigpst yevdfivmdi kpsyncllgr
      541 pwihsagavp sslhqklklv segrlvtina degiiasvts napyvetdee amecsf
//
LOCUS       XP_016706740             151 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706740
VERSION     XP_016706740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851251.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16690
     CDS             1..151
                     /gene="LOC107921395"
                     /coded_by="XM_016851251.2:1..456"
                     /db_xref="GeneID:107921395"
ORIGIN      
        1 mqattsclsk ssasapppqh rfssdliggr kglggaktvn vkvmaskrss gpyshnfdgk
       61 lvdesmivlr kriqemqrve ksyeppqhwm ewekqykkek ydldvcqavg slqsklmetr
      121 pavalgmtll llftlptsia allfhlipns l
//
LOCUS       XP_016706831             110 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_016706831
VERSION     XP_016706831.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851342.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=13103
     Region          <4..56
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..110
                     /gene="LOC107921498"
                     /coded_by="XM_016851342.1:1..333"
                     /db_xref="GeneID:107921498"
ORIGIN      
        1 mtnfekekgk aysqrqfknr wdalkkewka wkklksedtg lwwnhikrtv yasddwcesr
       61 lkilhkaqkf rtlaidpefe gkldemfmrv vatgdktwap ssdtlhseff
//
LOCUS       XP_016707984             150 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 75 [Gossypium hirsutum].
ACCESSION   XP_016707984
VERSION     XP_016707984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852495.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="probable WRKY transcription factor 75"
                     /calculated_mol_wt=17175
     Region          70..127
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..150
                     /gene="LOC107922449"
                     /coded_by="XM_016852495.2:1..453"
                     /db_xref="GeneID:107922449"
ORIGIN      
        1 menfqgfltt ssllgygefq sgkgsmeeme ggaenktfag llgtakkkgd hkrirkprya
       61 fqtrskvdil ddgyrwrkyg qkavknnkfp rsyyrcthqg cnvkkqiqrl tkdegmvvtt
      121 yegmhshpiq nsndnfehil sqmqiyttsf
//
LOCUS       XP_016706836             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706836
VERSION     XP_016706836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851347.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..271
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31002
     Region          6..230
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(7,36,106,137,139,197,223..224)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     Site            order(36,223)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197310"
     Site            order(106,139,224)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197310"
     CDS             1..271
                     /gene="LOC107921504"
                     /coded_by="XM_016851347.1:1..816"
                     /db_xref="GeneID:107921504"
ORIGIN      
        1 mkilcwncrg ignpatvrdl kqllvandpd iiflcetkis anrfssvrkk cnmegclavn
       61 aegksgglvl mwkdssmvei qsyssnhiya mvhneddepv rytgfygnad pnkrqcswnm
      121 lrrvgrsvke kwiiggdfna ildnakkegg rrkpialved freivhelsm vdlktdngwf
      181 twvnkregla mvkerldhfl isaqdvnsfp fmetkvlrqs ssdhdailld tegrklrdkf
      241 rdprlcfkyd vcwakneeak niikeawqsg t
//
LOCUS       XP_016706834             524 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 78A5 [Gossypium hirsutum].
ACCESSION   XP_016706834
VERSION     XP_016706834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851345.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..524
                     /product="cytochrome P450 78A5"
                     /calculated_mol_wt=59091
     Region          98..510
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(157,161,168,216,321..322,325..326,329..330,333,383,
                     394,396,419,456..458,462..466,469..470)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(238..239,321,324..325,329,392..395)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..524
                     /gene="LOC107921501"
                     /coded_by="XM_016851345.1:66..1640"
                     /db_xref="GeneID:107921501"
ORIGIN      
        1 mkllmlamin lslllslhav tvhldqtpwp falvlfsfls slpffmnywl vpggfawrkh
       61 hvyspqlrgp vgwpllgtlp lmgslahrkl antasslgat rvmafslgtt rviisshpdt
      121 areilsgssf sdrpikesar llmferaigf apsgkywshl rrlaanhmfs prrisclepl
      181 rqlvvdemlv einkgmeekg fvelrgilqk gslsnilesv lgssivekge lglmvkegye
      241 litmfnwedy fplrfldflg vkrrchklst kvrnivgqfv kerkkcgdki nnggndflra
      301 llalpkedql sdsdmaavlw emtfrgtdtv aillewimar mvlhqdiqak vqkeidtgic
      361 hnqvqdsdlp nfpylqvvvk evlrmhppgp llswarlath dvhvgksfvp agttamvnmw
      421 aithdpsiwk dlgtfrperf ieedvpimss dlrlapfgsg rrvcpgkalg laivqlwlar
      481 flqyfrwlpt aqnvdlsetl klslemekpl tcrvvprttq hiis
//
LOCUS       XP_040942323             224 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein [Gossypium hirsutum].
ACCESSION   XP_040942323
VERSION     XP_040942323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086389.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..224
                     /product="L10-interacting MYB domain-containing protein"
                     /calculated_mol_wt=26045
     Region          7..94
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..224
                     /gene="LOC121203229"
                     /coded_by="XM_041086389.1:1..675"
                     /db_xref="GeneID:121203229"
ORIGIN      
        1 maykrlteif cdicikdilk gnrpgthftr dgwlkimtsf eketgkgfsq rqlknrwdvl
       61 kkewkawkkl kgedtglgwn pikrtidasd ewwesrlqvv peakkfrtsg idpkfegkld
      121 qmfmwivatg dkawepssgt lpsdffedvn neipeeneee nmrndvhiln dvhisndvhi
      181 sndvqidghs qkkkktlrcq vhilkleern sqskleglqd cqvk
//
LOCUS       XP_040942324             955 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942324
VERSION     XP_040942324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086390.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..955
                     /product="uncharacterized protein"
                     /calculated_mol_wt=109391
     Region          482..521
                     /region_name="G_patch"
                     /note="glycine rich nucleic binding domain; smart00443"
                     /db_xref="CDD:197727"
     Region          <804..887
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            809
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     CDS             1..955
                     /gene="LOC121213595"
                     /coded_by="XM_041086390.1:1..2868"
                     /db_xref="GeneID:121213595"
ORIGIN      
        1 msykdlyqrl fdayvvaphy lkplqlpyln wydasaqcdy htgtighsie nyiafkklve
       61 kligmgvakl ddspnaenpf pnhnevnmms gnmgrnvkid ivevrtplrw vwkemkkrgl
      121 iiadleksye qkwnyckfhh eigheiqect efktlvqgmi dnketefyee vqeegnicts
      181 eltvgvpkan ypvviisrpk nsevrtcimp ktiiqkpatf pykdskkvpw nyecnttvpg
      241 ketsaataeg dqgigfhths gkrydlinpr akptkeeast ekqkrekviv peplinkpik
      301 eekvkeflkf lkhseysvve qlhkqpasis vlalllsfea hrsalmevln emyvandisv
      361 nkldrgstka lhittrckgy mlskvlidng salnvlplpt ldrlpvdssh mkklklvseg
      421 plvtisaeed ivatvtnnap yvetddealg csfqslefmn amfiiegdki lvpriskttk
      481 mglqlmvgmr alpgrglgrh iqgrvealvl kdkfdrfglg yrpdmkqkkk emekrqerrm
      541 arlsgkevkw epmtfphise tfvsggiihp qrripvkesi nemlenvhid aihedtneeg
      601 tlldirpyep gsvlnnwtae eipevfrafs esldingmsn samdpenpfe rdmcldgsqd
      661 fgddidsnls pdmlrmieqe ekqilpykev veivtleegk ivkmgtrite etkqnliell
      721 qefkdvfaws yqnmlglntd ivvhhlpikd dckpvqqklr rmrpnvvlki keevqeqfda
      781 gflqvvkyse wvanivpvpk kdgkvmpfgl knagatyqrv mvtlfhdmmh kevevyiddm
      841 iaksqtekeh vqvlrklflr lrkfqlklkp akctfgtrsr kllgfvvsek gieidpdkvk
      901 aipelrppht qkkvrgflgr lnyiarfisq ltekcdpifr lvkkhnpgvw deecq
//
LOCUS       XP_016706903             188 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706903
VERSION     XP_016706903.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851414.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21942
     Region          <1..41
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          75..188
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(80..83,113..115,118,142,182)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..188
                     /gene="LOC107921579"
                     /coded_by="XM_016851414.1:1..567"
                     /db_xref="GeneID:107921579"
ORIGIN      
        1 mestalnerm arwqillsef divyinqkav kgsaiaefla rqdledyepl dfdfqnedlm
       61 yvataeqdsq enhpwklnfd rtsnavgnei ravlisrygd hypftskldf dctnnmaeye
      121 acimgiraai erkiktlevy gdfalviyql kgewetrdlk lisyqklvle lmeefdditf
      181 cylprden
//
LOCUS       XP_016706902             169 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706902
VERSION     XP_016706902.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851413.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18727
     CDS             1..169
                     /gene="LOC107921578"
                     /coded_by="XM_016851413.1:1..510"
                     /db_xref="GeneID:107921578"
ORIGIN      
        1 mkdifskehr lrefeivalt egcttilayk lppklkdpgs ftipcsignh yvgkalcdlg
       61 akweadqdvs ivpgrpflpt grtlidvqeg eltmrvndqq vtfnafnvlk cadandecqa
      121 igliettvee ftrfchnifd sdedpleqsd tisfgkfgef mkatrvdsg
//
LOCUS       XP_016706901             177 aa            linear   PLN 06-AUG-2024
DEFINITION  tropomyosin-2-like [Gossypium hirsutum].
ACCESSION   XP_016706901
VERSION     XP_016706901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851412.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="tropomyosin-2-like"
                     /calculated_mol_wt=21076
     CDS             1..177
                     /gene="LOC107921577"
                     /coded_by="XM_016851412.1:1..534"
                     /db_xref="GeneID:107921577"
ORIGIN      
        1 mkilavgpmt tpeyhewwar rindntpkln ledsqsieeh lrvipselei irqyferrnv
       61 dlekkikqme aektnlildi dvqklenekl kkeknkaeee lgsletnykk mrlsirtagl
      121 gktseqwrae ireekdkvdr weqkcqemqr rnevleksls esqrekgelk drvvvle
//
LOCUS       XP_016706900             301 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase 7 [Gossypium hirsutum].
ACCESSION   XP_016706900
VERSION     XP_016706900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851411.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..301
                     /product="mitogen-activated protein kinase kinase 7"
                     /calculated_mol_wt=33836
     Region          37..293
                     /region_name="PKc_MAPKK_plant_like"
                     /note="Catalytic domain of Plant dual-specificity
                     Mitogen-Activated Protein Kinase Kinases and similar
                     proteins; cd06623"
                     /db_xref="CDD:132954"
     Site            order(44..48,52,65,67,90,107..110,113..114,117,153,
                     155..158,160,170..171,174,190..193,195,226,235)
                     /site_type="active"
                     /db_xref="CDD:132954"
     Site            order(44..48,50,52,65,67,90,107..110,113..114,116..117,
                     155,157..158,160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:132954"
     Site            order(47..48,153,155..157,174,190..193,195,226,235)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:132954"
     Site            order(170..184,189..195)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:132954"
     CDS             1..301
                     /gene="LOC107921576"
                     /coded_by="XM_016851411.1:1..906"
                     /db_xref="GeneID:107921576"
ORIGIN      
        1 mslvkhrlql slqltvpevk nckpimnasq evadllhlek lcvlghgnyg tvykvrhgqt
       61 saiyalkiir ggdpsheiki mhstdspfii eclgtyesvs gekaivmkym dagtldtlvk
      121 angpfsessi shiayqvlsg lnylhafniv hldikpsnll vdqsmnvkic dfgvskiire
      181 ndspefwdiy vgtyaymspe rldsngynsr yvfaadiwsl gvtllefyvg hfpflptgek
      241 pnwmqlvllm rfgdapslpk easedfrsfi ncclqkepsk rwtasqllsh pficmnsrfq
      301 e
//
LOCUS       XP_040942325             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942325
VERSION     XP_040942325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086391.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15639
     CDS             1..142
                     /gene="LOC107921575"
                     /coded_by="XM_041086391.1:1..429"
                     /db_xref="GeneID:107921575"
ORIGIN      
        1 msgslhrfat ithlsqkqpf adladpinri hpflrnrtki qareyvrlpn vvrkvreyei
       61 spslfssfss sfssstasfg kmgfvgwylg ivkswpvltk svtssaiyva vdlssqvece
      121 vvlggndart mpkkrgigll ci
//
LOCUS       XP_016706898             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706898
VERSION     XP_016706898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851409.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38053
     Region          139..254
                     /region_name="RNase_HI_RT_Ty3"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; cd09274"
                     /db_xref="CDD:260006"
     Site            order(143..146,175..177,180,205,238,252)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260006"
     CDS             1..335
                     /gene="LOC107921574"
                     /coded_by="XM_016851409.1:1..1008"
                     /db_xref="GeneID:107921574"
ORIGIN      
        1 mvvlrtgddk evvmigkrrd ylynvisave klvqkgceay layvsvlvsr dssigdirtv
       61 kgfldvfpmd lsslplnrev yfsiellsst alcvsvegtg svceekgwyh edqssfeklk
      121 svltqapvpi qpessrefvv ysdtshvrlg cvlmqdskvv ayasrqlqsh egnypthdle
      181 ldvvvfvlki wrnylygyrc iiytdhkslk yfltqnelnl rqhrwikllk nydctieyhp
      241 gkanvvanal srkamtdlrv mfaclslfdd rglfaelqvk ltwigqirek ylgdgslglq
      301 frqvesgstf dfglnkdgvl cfqgrlcvpn nsdlr
//
LOCUS       XP_016706896             660 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706896
VERSION     XP_016706896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851407.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..660
                     /product="uncharacterized protein"
                     /calculated_mol_wt=74425
     Region          78..172
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          594..>659
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(609,611,613,637..639)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            609..611
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            609
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(637..640,644..647)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..660
                     /gene="LOC107921572"
                     /coded_by="XM_016851407.1:1..1983"
                     /db_xref="GeneID:107921572"
ORIGIN      
        1 manqtlkqla apnlatqpps itypaldrpl klnsgflnlf pkfnglaged pyhhinefli
       61 tcstmqpdgi eeeqiklraf pfslqglakd wlyymppgsf ttwtrlhkaf lekyfpasri
      121 gsirkeicgi kqlvgeslye ywerfkrlca scpqhqiseq llvqyfyegl tpqdrgmida
      181 asggalvdkt peqarnlian mvqntqqfgl rrsdlgkrmd egqssmmeaq lanltamvsk
      241 lmtggnvkas lcgicclegh ttdmcptlhe reanavfpnq rrydpysaty negwrdhpnl
      301 ryqnratppg feqqnsrqyn ssqqqpshqn lsaktktham leqmmkmmad qeketdgrfq
      361 slestvkqlq trasstdvnl gnlqaqvnnr llsqpvvnpr dnvsaitlrs gkelrsilkk
      421 aqnsneegei evrkvrfsdi eeenlvlpka dlqpsqaapk evgksrlqws tashdaanfe
      481 qemrflelra qagqndnnqp rsyvpkapfp qclrkeksdd vnakiletfr kvqvniplid
      541 aikqvpryak flkelctskr rlignekisl genvstvfqk klpikckdpg mfsipckigd
      601 lkldramldl gasinvmprs iydrvqlgal kdmgliiqla drsnaypdgv ledvlvqvne
//
LOCUS       XP_040942326             409 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor GT-1 [Gossypium hirsutum].
ACCESSION   XP_040942326
VERSION     XP_040942326.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086392.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..409
                     /product="trihelix transcription factor GT-1"
                     /calculated_mol_wt=47002
     Region          103..166
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     CDS             1..409
                     /gene="LOC107921941"
                     /coded_by="XM_041086392.1:1..1230"
                     /db_xref="GeneID:107921941"
ORIGIN      
        1 mdltfltclv lhhclsrsee eekkpfsfpi rchvlvrpid lykeapaama rdmiievttn
       61 ggfpdhlhhy hphslqqqqq milgessgdd pevkapkkra eiwvqdetrs ligfrkemdg
      121 rfntsksnkh lwekisammr kkgfdrsptm ctdkwrnllk efkkakhpdr gsgsvkmcyy
      181 keieeilrer tkksykspts ppkldsfmhf sdkglcfedt sitfgpleas grpalnieqg
      241 ldydghplai ttasgvppwn wretpgnggd clpyggrvit vkygdytqri gidgtteair
      301 eaiksafrlr tkrafwlede dhiirsldre mplgnyklhl deglavkvcl ydesdhipvh
      361 teekifyted dyreylvlrg yaglreidgy rnidsmddlq tntiyrgvs
//
LOCUS       XP_016706908             950 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706908
VERSION     XP_016706908.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851419.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706908.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..950
                     /product="uncharacterized protein"
                     /calculated_mol_wt=109362
     Region          <65..>101
                     /region_name="ElsH"
                     /note="Metal-dependent hydrolase,
                     endonuclease/exonuclease/phosphatase family [General
                     function prediction only]; COG3568"
                     /db_xref="CDD:442789"
     Region          392..>488
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          697..792
                     /region_name="zf-RVT"
                     /note="zinc-binding in reverse transcriptase; pfam13966"
                     /db_xref="CDD:433612"
     Region          808..915
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     CDS             1..950
                     /gene="LOC107921587"
                     /coded_by="XM_016851419.2:1..2853"
                     /db_xref="GeneID:107921587"
ORIGIN      
        1 melvrlkcgf engidigpvg tkgglslgwk gnmlvklksf ssyhidvevh dnecgnvwrf
       61 tgfyghpdgr rrgnswnllr qlhqdqnqgl plvvmgdfne iidsfekkgg rlrpigqmrd
      121 frgvledccl ndlgfvgrwf twergrfast nirerldrgv aslswmntfp gyrlehsshs
      181 fsdhcpllld tlegvwnrqn kyeksfrfea kwclegsfeg mirrwweees ggvlskleki
      241 gsqilkwskv nsikerrnrl rledrlmnly tqdpsdevla eimevavqrh frckifeled
      301 gagrstnste eflqiasdyf gklfsasesg sdehlfclve kkvtssmner llrqfteedi
      361 ayvvkslapl kapgldgfpa lffqrywhiv gpevekpsnm thfrpislcn viykiiakvl
      421 vlrmsetlgs cvneaqgafi lgrlisdnvl iayeilhslk mkkrgkkgnf alkldmskvy
      481 drvewdflag vevvraiihe yemvsgkrvn fekfliyfga nvvfsvqedi vnllgvrlas
      541 npekylglpm mvgkrkkwaf anfvnqfrkr vegwsmryls mgakvgsyps ftwrsicsar
      601 dlisdgilwc vgngvsiniw nhpwlpgren nripvieikp pwstvnqlmn eedntwnrel
      661 ihnlvdddta nrifaipise srpedmlvwk yegsgeytvr sgyrvlitdy lqsnlhmsst
      721 neeyksfymd lwalhipeki kihvwrlfnn mvphygnlar rtlckeavcp lckedletta
      781 hllgscrvlr niwtslnklv hdgrnnfati ailarnhrge vieavtylve gvddafvaka
      841 rackralila klkgfrrliv egdsltvikk liknekdrsi irsivhnihr lcqgfdevsy
      901 kfvnrplnaa ahilavegrh rkvcgawvng ipetvrlvve edwlrwcqrt
//
LOCUS       XP_040942327             119 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein At1g05920-like [Gossypium hirsutum].
ACCESSION   XP_040942327
VERSION     XP_040942327.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086393.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="B3 domain-containing protein At1g05920-like"
                     /calculated_mol_wt=13312
     Region          2..91
                     /region_name="At2g31720-like"
                     /note="B3 domain-containing protein At2g31720-like;
                     pfam03754"
                     /db_xref="CDD:281714"
     CDS             1..119
                     /gene="LOC121213598"
                     /coded_by="XM_041086393.1:1..360"
                     /db_xref="GeneID:121213598"
ORIGIN      
        1 mggkgvvlvi qktifysdin ltanhfsipf sqikthdfln eaeakeltgk tpmqewlldp
       61 smkgtsitfn kwvmgsssly vltntwnpvv knnqlkkgdm vqiwsfqvns llcfalvkl
//
LOCUS       XP_016706894             198 aa            linear   PLN 06-AUG-2024
DEFINITION  secreted RxLR effector protein 161-like [Gossypium hirsutum].
ACCESSION   XP_016706894
VERSION     XP_016706894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851405.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..198
                     /product="secreted RxLR effector protein 161-like"
                     /calculated_mol_wt=22724
     Region          145..>182
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..198
                     /gene="LOC107921569"
                     /coded_by="XM_016851405.1:1..597"
                     /db_xref="GeneID:107921569"
ORIGIN      
        1 madhedicen ksevaeiffk vkamvenqsd cklkmqqqig dcfqgldark vwnvrlstpi
       61 aqgekltnne daekvdetsy rslvgcllyl tasrdiifav smlsrfihyc nvnhykaake
      121 vlryirgtls hgvkfvkven vkllgypdyg warstkdmks tssyfftlgp svfcwslknk
      181 kqwhsqllkf smlqlqql
//
LOCUS       XP_016706891             140 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706891
VERSION     XP_016706891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851402.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..140
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16173
     Region          <70..137
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..140
                     /gene="LOC107921565"
                     /coded_by="XM_016851402.1:1..423"
                     /db_xref="GeneID:107921565"
ORIGIN      
        1 mvdalatlas likvskqedi kpiqmsidet pahcysikee enddhpwyqd ilryvknrey
       61 ldqktendkr ilrrlasdyv ldgeilckkg kdqsttsess lfdhliniwe fipgpvpgtc
      121 slyflvdfkf qsplhrqple
//
LOCUS       XP_016706892              90 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 4-like [Gossypium hirsutum].
ACCESSION   XP_016706892
VERSION     XP_016706892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851403.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..90
                     /product="dirigent protein 4-like"
                     /calculated_mol_wt=9526
     Region          <1..88
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..90
                     /gene="LOC107921566"
                     /coded_by="XM_016851403.1:1..273"
                     /db_xref="GeneID:107921566"
ORIGIN      
        1 mndpltvgpd ltstvignaq gmfngssfsl fsrypptdfv psrgtirema ivggrgafrm
       61 akgftllrat ssnattgnas lefnvtlyhy
//
LOCUS       XP_016706889             129 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 4-like [Gossypium hirsutum].
ACCESSION   XP_016706889
VERSION     XP_016706889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851400.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..129
                     /product="dirigent protein 4-like"
                     /calculated_mol_wt=13973
     Region          <17..127
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..129
                     /gene="LOC107921563"
                     /coded_by="XM_016851400.1:1..390"
                     /db_xref="GeneID:107921563"
ORIGIN      
        1 miaqanitnn nnnssvpfst vlalddilki gpetnsevig naqglgvlia etsttnllwy
       61 wdfgfitgkf ngssismfsr npttamvhel svvggrgkfr makgyaqiqd yiqndtniis
      121 klnvtvihy
//
LOCUS       XP_016706887             167 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706887
VERSION     XP_016706887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851398.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19343
     Region          41..167
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..167
                     /gene="LOC107921560"
                     /coded_by="XM_016851398.1:1..504"
                     /db_xref="GeneID:107921560"
ORIGIN      
        1 mddlsiplkq eeellvpksr kewnegdkms iqlnakamhs lfcalgldey srissclnak
       61 eiwgklevth ertslvkksn mgiltfnyet fkikpqedik vmpdrftfvi nrlksygkty
      121 pnekvvrkml rslpkswkak viaieevknl etltldelir sllihem
//
LOCUS       XP_040942328             205 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942328
VERSION     XP_040942328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086394.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 2% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..205
                     /product="LOW QUALITY PROTEIN: uncharacterized protein"
                     /calculated_mol_wt=22951
     Region          26..>121
                     /region_name="PTZ00241"
                     /note="40S ribosomal protein S11; Provisional"
                     /db_xref="CDD:240326"
     Region          126..>173
                     /region_name="E1_enzyme_family"
                     /note="Superfamily of activating enzymes (E1) of the
                     ubiquitin-like proteins. This family includes classical
                     ubiquitin-activating enzymes E1, ubiquitin-like (ubl)
                     activating enzymes and other mechanistic homologes, like
                     MoeB, Thif1 and others. The common...; cl22428"
                     /db_xref="CDD:451392"
     CDS             1..205
                     /gene="LOC107921558"
                     /coded_by="XM_041086394.1:1..618"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:107921558"
ORIGIN      
        1 mvygfriqkf lcvetalifl fivyxtekef lkqpkvflsc kktgkgkrpg kggnrfwksi
       61 gfgfktprea iegtyidkks pftgtvsirg rilagtyhsa kmvrtiivrr nylhcikkyq
      121 rniqffglds qqkvtssyvv viglggvgsh aasmllrsgv gkllllgfdq vaektaflrp
      181 ielklvpvpw kvvhletsfl irmnl
//
LOCUS       XP_040942329             187 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942329
VERSION     XP_040942329.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086395.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..187
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21024
     Region          67..185
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(69..72,106..107,110,134,173)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..187
                     /gene="LOC121213599"
                     /coded_by="XM_041086395.1:1..564"
                     /db_xref="GeneID:121213599"
ORIGIN      
        1 mfggalwaiw ldrnktvnek qtktgrkian dllcclveid kseldgptrm sandqwipth
       61 gelievnfde afdkdclqsc srrvarnagg wvlvsrtilh envasafave alacswavqt
      121 smekgwsdli fegdslsvvn kcrinslnks eigayirniq qiskkfrwvr fqhvnrkanq
      181 lshilta
//
LOCUS       XP_016706884             498 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706884
VERSION     XP_016706884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851395.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="uncharacterized protein"
                     /calculated_mol_wt=56498
     Region          68..151
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Region          267..391
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          411..498
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     CDS             1..498
                     /gene="LOC107921557"
                     /coded_by="XM_016851395.1:1..1497"
                     /db_xref="GeneID:107921557"
ORIGIN      
        1 mtgtclicgl mehrvndyls ratvvrdqlv attapaparv rgrgrgddgr gvgqrgttis
       61 cdngptsvya vreprirgat dvivgtftlq sfpllalvds satrsfilrv varklgiaie
      121 tsilsvtiks pldwlskhra kmdceaklvt lcgaggskvv vgdkfellln vislrraekl
      181 vwkgfeayla yilnadsrem rleeipvvcd fsdaftkelh glpsnrevef siklypdtil
      241 vtvvpylmap kelkelklql qefldrgfir lsvspwgvlv lfmkkkngtl glcdedyfqd
      301 lvwslrvsch airvdectyr imdimnrvfh shldqfrmvf iydifvysrl eenhdehliv
      361 vqqvlrkkkl yaklskcefw lrqvvflghv vsaegvrvdp kkgflsiafe wtderqkcfe
      421 klksvltkah vltqliagkk ymvysdasyt glgyvsmqeg rvvayvsrll rshecnylth
      481 dlelaivvfe lkilhhyl
//
LOCUS       XP_016706883             406 aa            linear   PLN 06-AUG-2024
DEFINITION  monooxygenase 2 [Gossypium hirsutum].
ACCESSION   XP_016706883
VERSION     XP_016706883.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851394.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706883.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..406
                     /product="monooxygenase 2"
                     /calculated_mol_wt=45179
     Region          6..400
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     CDS             1..406
                     /gene="LOC107921556"
                     /coded_by="XM_016851394.2:24..1244"
                     /db_xref="GeneID:107921556"
ORIGIN      
        1 meivediviv gagiagltts lglhrlgirs lvlessdrlr itgfalstwn nawkaldaig
       61 igeslrhqhh ltpsilfast nldqpvseis ykghevrclq rrllletlan elpsdtirfs
      121 skvvsieesg flkrvhlsdg tilktkvlig cdgvnsvvak wlgfkkpvft grlairgytn
      181 fkdghglgpk frqfvgkglr fgflpcnded fhwfltwtps tkdeeleddp vklkqfvmsk
      241 ledipnemks vvektqldai lssplkyrrp wellwgnisk gnvcvagdal hpmtpelgqg
      301 gcaaledgvv larciaeall kpggeetngk ivdeeeedrr ieiglkifaq krrwrsidli
      361 stsymvgyiq qnngtvinfl rdnllstflp gmllrkgdfd cgklky
//
LOCUS       XP_016706882             134 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor JUNGBRUNNEN 1-like [Gossypium hirsutum].
ACCESSION   XP_016706882
VERSION     XP_016706882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851393.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="transcription factor JUNGBRUNNEN 1-like"
                     /calculated_mol_wt=15558
     Region          16..>94
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..134
                     /gene="LOC107921555"
                     /coded_by="XM_016851393.1:1..405"
                     /db_xref="GeneID:107921555"
ORIGIN      
        1 mevlekmise dedvllpgfr fypteeelvg fylrrkvekk lfyklssgte kewyffckre
       61 rkyrnnirpn rvtgsgfwka tgidkpiysr setvesakda kmkvrsgwrf gslapsvdvg
      121 rervgwrsis argg
//
LOCUS       XP_040942330             122 aa            linear   PLN 06-AUG-2024
DEFINITION  SRP-independent targeting protein 1-like [Gossypium hirsutum].
ACCESSION   XP_040942330
VERSION     XP_040942330.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086396.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..122
                     /product="SRP-independent targeting protein 1-like"
                     /calculated_mol_wt=13000
     CDS             1..122
                     /gene="LOC121213600"
                     /coded_by="XM_041086396.1:1..369"
                     /db_xref="GeneID:121213600"
ORIGIN      
        1 mgrkgaidcs cddedarikp sdatvrleak nftatakhes slfgvnaliq srqqvistvs
       61 gggfedltts hsstvegdgd qdktmagded vdeggnedey kgrgedeede dddhdqeees
      121 ap
//
LOCUS       XP_016706879             159 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR68 [Gossypium hirsutum].
ACCESSION   XP_016706879
VERSION     XP_016706879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851390.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="auxin-responsive protein SAUR68"
                     /calculated_mol_wt=17830
     Region          11..111
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..159
                     /gene="LOC107921553"
                     /coded_by="XM_016851390.1:1..480"
                     /db_xref="GeneID:107921553"
ORIGIN      
        1 metsmitskn lirmtrkwqk iasigskria strtsktyid aakhsnessv vdkgcfaiyt
       61 idkrrfvipl aflsnsifle lfkmseeefg lpgdgpiklp cdsvlmnyiv sivkrglakd
      121 meksglnsip tyrcssdvyf nqvdadqqsl chgfqvnwl
//
LOCUS       XP_016706878             147 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR64 [Gossypium hirsutum].
ACCESSION   XP_016706878
VERSION     XP_016706878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851389.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="auxin-responsive protein SAUR64"
                     /calculated_mol_wt=16129
     Region          7..106
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..147
                     /gene="LOC107921551"
                     /coded_by="XM_016851389.1:1..444"
                     /db_xref="GeneID:107921551"
ORIGIN      
        1 mvstkelikm arkwnkiaai grkritsprs nnpmmanadn snkssvvgkg yfvaytmdkk
       61 rfliplafln nsifqallkm seeefglssn rpltclcdsv imsyivllvr rglakdleka
      121 vinsitsnsc sscstyychg attncgp
//
LOCUS       XP_016706877             154 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR68 [Gossypium hirsutum].
ACCESSION   XP_016706877
VERSION     XP_016706877.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851388.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706877.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..154
                     /product="auxin-responsive protein SAUR68"
                     /calculated_mol_wt=17188
     Region          11..110
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..154
                     /gene="LOC107921550"
                     /coded_by="XM_016851388.2:1..465"
                     /db_xref="GeneID:107921550"
ORIGIN      
        1 measmitskk lmrmtrkwqk masigrkria strptrkmaa anhsnkssiv dkgcfsiytm
       61 dkkrfvipla flsnsifrel fkmseeefgl psdgpitlpc dsvvmnyivs ivkrglakdl
      121 ekavlnfitt yscsldtyad qghadqqsvl vcgf
//
LOCUS       XP_016706875             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706875
VERSION     XP_016706875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851386.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20920
     Region          46..>169
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..189
                     /gene="LOC107921546"
                     /coded_by="XM_016851386.1:1..570"
                     /db_xref="GeneID:107921546"
ORIGIN      
        1 mattgyhnrs nsfpsrahpl askvdehlsk lassesasts sslnqklgrl hdlhdctekl
       61 lllpltqqtl sheqqgeyvd ellngslgll dvfttakdvv lqrgatkgfa nevrkylssk
      121 kaakrailkt lknlkheest alnetyatvs ilrevqavtl smleslfsft fclyktpvrk
      181 ilntrtkle
//
LOCUS       XP_040942331             288 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942331
VERSION     XP_040942331.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086397.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31972
     Region          54..285
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..288
                     /gene="LOC107921835"
                     /coded_by="XM_041086397.1:1..867"
                     /db_xref="GeneID:107921835"
ORIGIN      
        1 maapplnvqp sfharsnslp srqhpitsqi denlnrfras qsastsssst ghelaclqdl
       61 ydyvdmllqf pltqqalaqd qqrksveqvl daslvlldvc gtakdallrt kectqelqsv
      121 lrrrrggveg lgdevrkylt skkevrkais kafknlkhmd nklmskdget gavistlkqv
      181 vaatmgvlqs llsfisgpea ssrwslvskl mhqksvwcee eeektneian aeaalrsfik
      241 sgnvkhvenv qnelknselc iqdleegles ffrrlikarv tvlnivnc
//
LOCUS       XP_040942332             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942332
VERSION     XP_040942332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086398.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21295
     Region          50..>173
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..193
                     /gene="LOC121213601"
                     /coded_by="XM_041086398.1:1..582"
                     /db_xref="GeneID:121213601"
ORIGIN      
        1 mvglalnggg sssfqhfpsr ahplaskvde hlrrlalses astssslnqk lgrlhdlhdc
       61 tekllllplt qqtlsheqqg eyvdellngs lglldvftta kdvvlqrgat kgfanevrky
      121 lsskkaakra ilktlknlkh kesialnety atvsilrevq avtlsmlesl fsftfclykt
      181 lvrkilntrt ele
//
LOCUS       XP_016706871             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706871
VERSION     XP_016706871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851382.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34923
     Region          <1..53
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..308
                     /gene="LOC107921542"
                     /coded_by="XM_016851382.1:1..927"
                     /db_xref="GeneID:107921542"
ORIGIN      
        1 mddirgveki lrsldsrfdy ivvaieeskd lstmtidelt sslqaheerl nkkkkevdld
       61 qalqsklsln ekkgdfknqr grdpghgrgr yfrgrgsnar ergedasten gwkeanqsqn
      121 frgsqrgrgh gnqrgrgrgy fecyhcrkps hlasecwykk eekneanivq nnqeqkqetl
      181 llishggeid dvwcidngas khmtgnkklf skffesdcge vkvgdgkayk vssvgelefk
      241 tkqgrvekms evyfvpglkn nllsvghllk kgydihfrdm acylskknqv varvgvasnn
      301 lfsltfqn
//
LOCUS       XP_016706870             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706870
VERSION     XP_016706870.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851381.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706870.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22370
     Region          54..>188
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..203
                     /gene="LOC107921541"
                     /coded_by="XM_016851381.2:1..612"
                     /db_xref="GeneID:107921541"
ORIGIN      
        1 maasplnvqp sfharsnslp srqhpitsqi denlnrlras qsastsssst gheltclqdl
       61 ydyvdmllqf pltqqalaqd qqrksveqvl daslvlldvc gtakdallqi kectkelqsv
      121 lrrrrgeveg fgdevrkylt skkevrkais kafknlkhmd nklmskdget gavistlkqv
      181 vaatmgvlll vqeaatdyfq scl
//
LOCUS       XP_016706810             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706810
VERSION     XP_016706810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851321.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..292
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33087
     Region          49..288
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..292
                     /gene="LOC107921471"
                     /coded_by="XM_016851321.2:1..879"
                     /db_xref="GeneID:107921471"
ORIGIN      
        1 maaqtthhar snsfplqsrp nplvseideh lnrlrdseet stsssishkl nglqdlydcv
       61 dkllrlpfsq qelaqeqnkg pvdelldgsl rlfdlcnttk dillqtkgsi qdiqsvmrrr
      121 pcgevelvge vrkyftsrkv vqktihkalk nvkgvetkri fsssndhetk amvsllreae
      181 avtssmfeyl ftlisgpmer skcgswalvs kllhhkriac eqtgrrdine fekvdaalrs
      241 vmsqkmskse nvemprqlke lelcvqdled gleclfrcmi karvsllnal nh
//
LOCUS       XP_016706868             289 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706868
VERSION     XP_016706868.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851379.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..289
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33167
     CDS             1..289
                     /gene="LOC107921539"
                     /coded_by="XM_016851379.1:1..870"
                     /db_xref="GeneID:107921539"
ORIGIN      
        1 mtpqqardli smmaansqqf rannkpprrv hqlsnstled kvdkltnkmn slivekvktv
       61 rlyddttahl davgnfpgpp qrqydpyant ynpgwrdhps lryganprnn qpyqnqfsqq
      121 pqgsgnflet mvnklatnvl dfqqktlnfq kelkdfqqkt eatireltts iekltsqgkl
      181 psqtepnprq nanavtlrsg kvlelipnrn lsqeiaqkkp ekdeqvrpkp qlpkiqppfp
      241 erfnqcrrgk edkeiletfr nveinislld aikqipqyak flkelctnk
//
LOCUS       XP_016706867             147 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810 [Gossypium
            hirsutum].
ACCESSION   XP_016706867
VERSION     XP_016706867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851378.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="uncharacterized mitochondrial protein AtMg00810"
                     /calculated_mol_wt=16425
     Region          <1..103
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     CDS             1..147
                     /gene="LOC107921538"
                     /coded_by="XM_016851378.1:1..444"
                     /db_xref="GeneID:107921538"
ORIGIN      
        1 mdfevskadg slfilrsgeq lmfvlvyvdd iivtgndsqa vdqfvsqlna rfslkdlgkl
       61 nyflgievqy taegvyllqt kyiqdllcka smdqsnslpt pmvtnyhlsa idgipindeh
      121 qyrnivgtlq yvvitrpdit ysvnnvc
//
LOCUS       XP_040942333             673 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942333
VERSION     XP_040942333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086399.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..673
                     /product="uncharacterized protein"
                     /calculated_mol_wt=75903
     Region          412..505
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(427,429,431,457..459,498)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            427..429
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            427
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(457..460,464..467)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..673
                     /gene="LOC107921535"
                     /coded_by="XM_041086399.1:1..2022"
                     /db_xref="GeneID:107921535"
ORIGIN      
        1 mientirsgk idagkssrrs vskrkenevn ntssysktvt vnqskkvavn qqgsskqrsd
       61 trqnteklqf tpipipyrel yqnlfnahvv aphhlkplqp pypkwydana qydyhagivg
      121 hsiehctvfk klveklismg vvklddspst enplpnhndn gvnmiggsmg rkikedisev
      181 kiplrwvwkn mectefralv qglmdnkemd fyeevkedws ictsesskvp rvvqpvviis
      241 rpkkdevrts amlriiikkp atfpyqdskk vpwnyecntt vpgketaksq cvsanpesmk
      301 eatlgeqkgk vvepvkeeev veflkflkys eynvveqlhk qsarisvlsl llnseihrst
      361 lmkmlnktyv skdisvskld rlvnnisadn fiffnddeip sggmgstkal hitarckgri
      421 lsgvlidngs alnvlslftl nrlpidsshm ktcqnvvraf dgterkvmgr ievplligpt
      481 vyevdfivmd ikpsynyllg rpwihstgav psslhqmlkl vsdgrlvtik aeenmiiavs
      541 neipyvetnd esvecsfrsl efvnaafvpe gskilapkls kttemglqll vgkkalpgrg
      601 lerylqgkie vlvlkekqdn fglgykpdrg qrrkeiekrq errkarlnge eakwepmiip
      661 hisktfisgg vih
//
LOCUS       XP_016706864             652 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At4g27220 [Gossypium hirsutum].
ACCESSION   XP_016706864
VERSION     XP_016706864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851375.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..652
                     /product="probable disease resistance protein At4g27220"
                     /calculated_mol_wt=74859
     Region          <100..>229
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..652
                     /gene="LOC107921534"
                     /coded_by="XM_016851375.1:1..1959"
                     /db_xref="GeneID:107921534"
ORIGIN      
        1 medlvryawg lnlydkansi eemrtqvsnv ieylknccll edgdvgryvd rdgnfdryvk
       61 lhdlvrdvtl wiaseeksgf iiksrlelln knsecckais lldieeknlp nrlilsklei
      121 lllnncegsk segladelgr lenlkmldlk rldnmnfppn virrlsqlee lylpgleyre
      181 isnyifleik fltrltrlfl evsslhfple fefpelkyyn icinyissih ysrfeearsl
      241 kvekvfpyna vsqllgnles lqvsriedey vecltnktqq kvsasmilrd lkvvrieyck
      301 nlkvvfqmee veeneaplls nlkilhlqnl ldlsciwelp tqhgvplsaf kdsfkiskql
      361 eltaikdhnl vpeanedgln gvislrlrdc tyleclvdtt ttatkngpae aelifsmedi
      421 dsedvnlcdl vntqliqksp dfeyitlenf eqlfqlqggn iisslekmel fnvirlqdiw
      481 kgpihvatnl relrvhrcnn ltyifpvali rhlpqlsiln iascenlkqi ignddilass
      541 sspqgpqlem klvfpqlkqi vlenlpnles fsplgshlef scldlldikq cskvitrfsa
      601 dyltlivhgk tdqasqlndt sssrediiwe rrkatllpqy keagaeeisp fk
//
LOCUS       XP_016706863             108 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 20 [Gossypium hirsutum].
ACCESSION   XP_016706863
VERSION     XP_016706863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851374.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="GATA transcription factor 20"
                     /calculated_mol_wt=11756
     Region          8..53
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(9..10,12,22..32,52)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..108
                     /gene="LOC107921533"
                     /coded_by="XM_016851374.2:1..327"
                     /db_xref="GeneID:107921533"
ORIGIN      
        1 mvlvildtpl wrngppekpv lcnacgsryr lgkplenyip kstlqiiqkk krkavpksiv
       61 tnngnasyss samgdyasse sstahnlnfc sikqenlddd fhpgfsvs
//
LOCUS       XP_040942334             244 aa            linear   PLN 06-AUG-2024
DEFINITION  RHOMBOID-like protein 10, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040942334
VERSION     XP_040942334.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086400.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..244
                     /product="RHOMBOID-like protein 10, chloroplastic"
                     /calculated_mol_wt=27678
     Region          <1..64
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; cl02620"
                     /db_xref="CDD:470635"
     Region          104..211
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..244
                     /gene="LOC107921034"
                     /coded_by="XM_041086400.1:1..735"
                     /db_xref="GeneID:107921034"
ORIGIN      
        1 mleggnlalk nnihykkpvr virkynsddn anasrykfvy eglyrvtrfd keiesgfsvy
       61 kfqldmledh qqydskwkqk riwriyvaql atqgklllwg dkvncyslns vgptvanlsg
      121 prrflavylt saisiernlg aatsywfcka pavgasgaif glvgsvavfv mrhrgmirda
      181 kedlqhiaqv iflnmviglm ssgidnwghv slnyrppyts rrlawrsssv lacrtcmevr
      241 iygq
//
LOCUS       XP_016706857             210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706857
VERSION     XP_016706857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851368.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..210
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24148
     CDS             1..210
                     /gene="LOC107921526"
                     /coded_by="XM_016851368.2:1..633"
                     /db_xref="GeneID:107921526"
ORIGIN      
        1 mspeqgrcrg laldgrvani lkasfssafq tdfcnkksfs lkskeerpsf qnyfhhlkst
       61 fladeklkis tlfsqkpvwl iishfnlssp pkkvsflwff valypffshf hfqsslfrff
      121 vplppldlry gakrsladpp rltlalkscd isstrphlli vggndafarl yyrrmlpplt
      181 scqkrmlppt yvnyffpmhl sdcvsfeilc
//
LOCUS       XP_040942335             199 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942335
VERSION     XP_040942335.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086401.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22931
     Region          69..96
                     /region_name="SWIM"
                     /note="SWIM zinc finger; cl45927"
                     /db_xref="CDD:459272"
     CDS             1..199
                     /gene="LOC121213604"
                     /coded_by="XM_041086401.1:1..600"
                     /db_xref="GeneID:121213604"
ORIGIN      
        1 mgqqqvnqme aghvfvegir damvvnrrma rsmtvevysr hnetfrvtet idcrpsippr
       61 sygvdlqnrr cdcrrfqtlh fpcahvvaac akvglnveqf idevytiert lrvwenefpv
      121 lpdlstwevp pttfelvldi rlrrnlkgrp qssrihnema ireksdrnlc gvcrlpghnq
      181 skcplrnyhv gqlsqsgrn
//
LOCUS       XP_040942336             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942336
VERSION     XP_040942336.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086402.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18150
     CDS             1..159
                     /gene="LOC121213605"
                     /coded_by="XM_041086402.1:1..480"
                     /db_xref="GeneID:121213605"
ORIGIN      
        1 mvgekllawv swlplaewwy nttyhsaiqt tpyealygqi tplhlpyiag etpvdsvdrt
       61 lqqreamrkv gdlvylklqp yrqhslhkfr nqklspqyfr pfpmearvrn vayrlsllss
      121 ariypnfhvs qlkkhigsav saltfpqigs ngalpkspv
//
LOCUS       XP_040942337             177 aa            linear   PLN 06-AUG-2024
DEFINITION  heparanase-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942337
VERSION     XP_040942337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086403.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="heparanase-like protein 2"
                     /calculated_mol_wt=19524
     CDS             1..177
                     /gene="LOC107921522"
                     /coded_by="XM_041086403.1:1..534"
                     /db_xref="GeneID:107921522"
ORIGIN      
        1 mtsvynhkvh crqaliggny allttttfvp npdyygallw hrvmgskvis vthkgspylr
       61 vyshcakkep gvsfvfinls kntsfeidlf hdlnlnggsp nfefkghkkr eeyhltpkdg
      121 nilssivlln etplelsdsl eipalkpklv dglkpisiaa hsiafvtird fnapacs
//
LOCUS       XP_040942338             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942338
VERSION     XP_040942338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086404.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..257
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29899
     Region          16..129
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(21..24,54..56,59,112,126)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..257
                     /gene="LOC121213606"
                     /coded_by="XM_041086404.1:1..774"
                     /db_xref="GeneID:121213606"
ORIGIN      
        1 myvaiaeeds qknhhwklnf drasnavgng igavlvspng yhypftskld fdctnnmaey
       61 etcimgiraa ierkikilel kgewekrdpk lihyqklvle lieefdsitf rylpqdenqm
      121 vdalatlasm ikvnksedmk siqisiyetp apcykndkrt lrrltidyvl dgeilynrgk
      181 dqvllryvda veakkileev hevykieail pieveisslr vlaelkldea ewiqfrydkl
      241 nlieekrlkv ihhgqmy
//
LOCUS       XP_016706851             490 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL66 [Gossypium hirsutum].
ACCESSION   XP_016706851
VERSION     XP_016706851.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851362.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706851.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="agamous-like MADS-box protein AGL66"
                     /calculated_mol_wt=54669
     Region          7..80
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(7..9,11,13,18,20,24..25,28..29,31..32,35..36,38..39,
                     43)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(26,33..34,37..38,40..41,44,49,51,53,59,61,67,70..71,
                     74,77..78)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            64
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..490
                     /gene="LOC107921519"
                     /coded_by="XM_016851362.2:26..1498"
                     /db_xref="GeneID:107921519"
ORIGIN      
        1 mvkktlgrqk iemvkikdes nlqvtfskrr sglfkkasel ctlcgveiai ivfspgnkvf
       61 sfghpdveni lnryvhntkd tsptwqliea hrnaiilrln aqltemmsqi eaqkkrgeel
      121 dkmrkasqeq nwwespieel slpqlqflrs amaelkkivq reaeqliiqn tncqqlfpgs
      181 ssqgtntnsk qffigsssqe mdtnrqqffp gsssqgmdtn pqqfftgsss qgmdtnpqqf
      241 ftgsssqgmn tnprhppqff sppqhppqff trsssqgmdt npftrssiqg mdtnpqlfne
      301 kssqgmetnp qhppqfftgs siqgmdtnpq qfftrsssqg mdtnpqhlpq fftgssiqgm
      361 dtnpqqfftr ssiqgmdtnp rqlfpekssq gmdtnpqqff tgssiqemdr npslffigss
      421 sqggtpnyet mnnnmalnan rmggeyidpn miaptpnynp nppaeghiyp npegsdilap
      481 tspgfgsglf
//
LOCUS       XP_040942339             220 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL62 [Gossypium hirsutum].
ACCESSION   XP_040942339
VERSION     XP_040942339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086405.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="agamous-like MADS-box protein AGL62"
                     /calculated_mol_wt=25003
     Region          65..138
                     /region_name="MADS"
                     /note="MCM1, Agamous, Deficiens, and SRF (serum response
                     factor) box family of eukaryotic transcriptonal
                     regulators. Binds DNA and exists as hetero and
                     homo-dimers. Composed of 2 main subgroups: SRF-like/Type I
                     and MEF2-like (myocyte enhancer factor 2)/ Type...;
                     cl00109"
                     /db_xref="CDD:469617"
     Site            order(65..69,71,76,78,82..83,85..87,89..90,93..94,96..97,
                     101)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238067"
     Site            order(84,87,91..92,95..96,98..102,107,109,111,117,119,121)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238067"
     Site            order(92..93,96,100,116..123)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238067"
     Site            122
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238067"
     CDS             1..220
                     /gene="LOC121213607"
                     /coded_by="XM_041086405.1:1..663"
                     /db_xref="GeneID:121213607"
ORIGIN      
        1 mspscagdfs hvlatliqrf rvaqmygias msddiilydf vcerlenevi svtklmketv
       61 kktlgcqkie makikyesnl qvtfskrrsd lfkkasepct lcgveiairv fssgnkvfsf
      121 ghpdveniln vyvhntkdts ptrqlieahh naiilrlnaq lnevcqmeaq kkrgeeldkm
      181 rkasqeqnww espieelslp qlqflrsama elkkimqkgs
//
LOCUS       XP_040942340             382 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: RING-H2 finger protein ATL65-like, partial
            [Gossypium hirsutum].
ACCESSION   XP_040942340
VERSION     XP_040942340.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086406.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         <1..382
                     /product="LOW QUALITY PROTEIN: RING-H2 finger protein
                     ATL65-like"
     Region          130..173
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            158..163
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..382
                     /gene="LOC107922396"
                     /coded_by="XM_041086406.1:<1..1149"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:107922396"
ORIGIN      
        1 ppppsplsss sppssssssp slsppsklpv dfsppliamv vvvaaaflvv tysrliskrl
       61 vplilrllsf frrrrrrrwf lpstttdlds lppsdpfdlp lspygldasa iktlplslyt
      121 skldnnspkd cavcllefed neyvrtlpvc shafhvdcid vwlkshancp lcragifate
      181 spftplmaar irpslddpvf enntleslte tplqsfpnnt iteiteepsp rrrngnsnce
      241 erfnfvlkrl ysfgfersla aermitepnt aspwryrrgg ngfwsrrtsp fgslmmkprv
      301 fsfryyggik aspffgrrgf fplsvssvrf taagggssrr sksmaspmfl rsaassvaaf
      361 sssrlrcgdp eallsperfn rr
//
LOCUS       XP_040942341             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942341
VERSION     XP_040942341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086407.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21643
     Region          <4..60
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     Region          <77..>172
                     /region_name="EmrA"
                     /note="Multidrug resistance efflux pump EmrA [Defense
                     mechanisms]; COG1566"
                     /db_xref="CDD:441174"
     CDS             1..193
                     /gene="LOC121213608"
                     /coded_by="XM_041086407.1:72..653"
                     /db_xref="GeneID:121213608"
ORIGIN      
        1 mtleaaevme klkdkkaeye aiassdssvh idvidnriit evlgperygr vrfqgsfvnp
       61 sqffgsssqq ympsgsraea kvqrlrdqma rmqattieqi tqlkaeatsr eaevqkryee
      121 lqlqlkadaa areaevqrky eelqqqlkvd aaareaeaaa revqakarea eavngevkir
      181 wcagawnhsq iik
//
LOCUS       XP_016706849             677 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706849
VERSION     XP_016706849.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851360.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706849.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..677
                     /product="uncharacterized protein"
                     /calculated_mol_wt=76318
     CDS             1..677
                     /gene="LOC107921517"
                     /coded_by="XM_016851360.2:1..2034"
                     /db_xref="GeneID:107921517"
ORIGIN      
        1 mlsweaktqi qqlrdlislg ddvctaatkt ksfkkevsnl vplvyrlsqm lktllcfvts
       61 phtslylrpl hcivkevkvg fehalsivhk ckrgnllwkl fttcsyatqf velfnclnas
      121 tsdmkwllsi ympqscstst yekpvkvkvw sciaavkmgr aledrvravk qlaslaeqnd
      181 eykniiyeed gvpslqkllk ekisldaqim tvktlcllan eeekkrvimk emvstilsrl
      241 srtsaisdqi qaanlvtgia ehnpelkeya lirenviwql itllspaddt krnpklklsc
      301 sralwmlvqg sisncktlte tkgmlclakl lktekdelqy nclmiireit aiaesnnefr
      361 hstfkssspa akavvdellr vikefdnmkl ripaiksvgs larsfsakec qvisplvarl
      421 gdadrevame asialqkfic pnnylscehs ksiiesngvp lliklllddg deklqchrlt
      481 licylanhds nsnvlikgga ltalqttapt vmaqhpelkq lvsqaicklq snkadkhqel
      541 ensrgikrfi teqgkavvdl vrglklklet kcvggrvniq lqgywksykk kisgairslr
      601 mrrrwrvvka ksvdlaltlr svieysgkrv imketasklr vvkrivksme kkeirrkfgf
      661 iihkifisvm sicysvt
//
LOCUS       XP_040942342             216 aa            linear   PLN 06-AUG-2024
DEFINITION  secreted RxLR effector protein 161-like [Gossypium hirsutum].
ACCESSION   XP_040942342
VERSION     XP_040942342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086408.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..216
                     /product="secreted RxLR effector protein 161-like"
                     /calculated_mol_wt=24833
     Region          <1..>24
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          114..>176
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     CDS             1..216
                     /gene="LOC121213609"
                     /coded_by="XM_041086408.1:1..651"
                     /db_xref="GeneID:121213609"
ORIGIN      
        1 mdvkiaflnd dleeevymkq pkgfsssdge hlhsknefer eqmnnipyas ivgslmyakv
       61 rtrldiafav gmlgryqsts gidhwraakk vlrylkgtkd ymftykrsdn lkvivyfdld
      121 fadcvdsrks tssyifmftg gaiswksvkq tltttstmkv efilcfkttl hvvwlkifiy
      181 glrlvdsifr pltasertnv qsvntttkdm klrrcp
//
LOCUS       XP_040942343             189 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAIN-LIKE 2-like [Gossypium hirsutum].
ACCESSION   XP_040942343
VERSION     XP_040942343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086409.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="protein MAIN-LIKE 2-like"
                     /calculated_mol_wt=20945
     Region          49..>189
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..189
                     /gene="LOC121213610"
                     /coded_by="XM_041086409.1:1..570"
                     /db_xref="GeneID:121213610"
ORIGIN      
        1 maaslirfdd rhistaqavm andhvlecfi hnigkpaife icghlqaagf lhaarmsrgc
       61 kldlalfnal verwrhetht fhlpcgkcti tledvalqlg lpvdglvimg saivlgkvgl
      121 cqsllgnvsd kfegdwismn wlkdnfnelp kdlenqteev ieqyarayim rltggilvpn
      181 ksrnlvhik
//
LOCUS       XP_016706413             379 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706413
VERSION     XP_016706413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850924.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..379
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43098
     Region          83..357
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..379
                     /gene="LOC107921072"
                     /coded_by="XM_016850924.2:1..1140"
                     /db_xref="GeneID:107921072"
ORIGIN      
        1 mappiirsli afslnkscrs qkpisgysis siffsssptq esraslplad hlvekhsfsp
       61 elavktassl tyvkdprkcd tiisflkesg fskshieavv krkpnllyss lektikpkfk
      121 ifqdlgfsth dvadivasdp wiltrsvddr iapsisdlkt vlgsnddvvk llktsawflk
      181 sdlqktmmpn ieflrncgic ssqivsyvfs fprffllkpe sikqfverad algfdrksnm
      241 flaairmlss mseenwelkl klfrklgfse ddimstfrrt pqvfavserk ikqvtdflln
      301 rtnvgisfii shpmvlicsl errlkprllv ietlesknsl rrkvsmttiy kmpdkkfrek
      361 yvvpylkele evsmsivgt
//
LOCUS       XP_040942344             590 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTEF18, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040942344
VERSION     XP_040942344.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086410.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..590
                     /product="transcription termination factor MTEF18,
                     mitochondrial"
                     /calculated_mol_wt=67829
     Region          318..565
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..590
                     /gene="LOC121213612"
                     /coded_by="XM_041086410.1:1..1773"
                     /db_xref="GeneID:121213612"
ORIGIN      
        1 malilnprrp kplpesefvk pqrvtaaasw lplyqltkik paychwssqn lpnprfyrsk
       61 gsavavkrev levpkiprat lkeaqaalle ylhwtrsipf mdaeniskns phflrnllek
      121 vnivkdvrss marflryhpi nefepffesl glkpweytpl lprnlmflsd dslffenyrv
      181 lcqfgiernk igriykkaiq vfqlesgals lklqayqelg lshsfmvkii vcspcvligd
      241 vdmkfikvle ilrsmgfdha wiqehladqd synwglilrv lnifsemffs nelvrlinqh
      301 pgllfegsgy atfsligfll kfghpidqis smflqfpkiq vqqfvsnlik cfvffheiem
      361 evdeiaklvc sytvllgscr lkktnsllsn lnvgkkrlck yiqenpqels kwviglrivp
      421 lpdsgedies krlkmkflld lgygenpnmm nkafkvfrgr ggelqerfds ivnagldkad
      481 vsemvtvspq ilnqsktviq skidilvnel gyplsslvsf psflsyttqr vrlrmamynw
      541 lkdhkkaepd lalstivacs dkiflnqyvn hhpsgprvwq dlkaelnmdk
//
LOCUS       XP_040942345             238 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid permease 2 [Gossypium hirsutum].
ACCESSION   XP_040942345
VERSION     XP_040942345.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086411.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..238
                     /product="amino acid permease 2"
                     /calculated_mol_wt=26442
     Region          58..>222
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..238
                     /gene="LOC121213613"
                     /coded_by="XM_041086411.1:1..717"
                     /db_xref="GeneID:121213613"
ORIGIN      
        1 mieyikdsql lvvklsvttc inhiltgktq lhnnqvfnls vlpqggskcf dddgrlkrtg
       61 ivwtasahii tavigsgils lawataqlgw iagpavmfff sfvtyytstl lsacyrcddp
      121 vngkrnytym davrsnlggf kvkicgwvqy lnlfgiaigy tiassismma ikrsscfhes
      181 ggknrfhmns npcriafgia eimfsqvpdf dllwwlsiva avvlqllnnw dwtcswsy
//
LOCUS       XP_016706847             397 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog [Gossypium
            hirsutum].
ACCESSION   XP_016706847
VERSION     XP_016706847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851358.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /calculated_mol_wt=44647
     Region          36..377
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..397
                     /gene="LOC107921515"
                     /coded_by="XM_016851358.1:1..1194"
                     /db_xref="GeneID:107921515"
ORIGIN      
        1 maelirsglv ssikgrvsvl kiapdaqfmp ylelagfgsv alirssdlrf dllsalverw
       61 rpethtfhfp cgectvtled vavqlglpvd gspvtglssl tdpdavcykl lgespedsdk
      121 yffgikftwl rakicrlsat asegelicaa rayimhliga llmpdvngds vhllylplla
      181 dsstarsysw gsavlatlyn elcratepkv kdiggclill hhghfigchf whawatypgi
      241 gkscdvpiyr mrieqhareg fiwmpyrrpe itnvvppsal vdshtwctnt piinfnvvew
      301 yhgdrvlrqf gciqpipdsp cqlgkdhglt krgrvqldwg iyhrkyvtlw ydrlhripqm
      361 vmatdlqpsr qytewyhsrg kpyllgaqst iippyvq
//
LOCUS       XP_016725842             255 aa            linear   PLN 06-AUG-2024
DEFINITION  probable L-type lectin-domain containing receptor kinase S.5
            [Gossypium hirsutum].
ACCESSION   XP_016725842
VERSION     XP_016725842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..255
                     /product="probable L-type lectin-domain containing
                     receptor kinase S.5"
                     /calculated_mol_wt=27970
     Region          27..248
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            order(27..28,30,41,74,77,171,191,200,202..204,206..208,
                     210,222)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173887"
     Site            order(27..28,30,41,74,77,222)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173887"
     Site            132
                     /site_type="other"
                     /note="N-linked glycosylation site"
                     /db_xref="CDD:173887"
     Site            order(144,146,159)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     CDS             1..255
                     /gene="LOC107937469"
                     /coded_by="XM_016870353.1:1..768"
                     /db_xref="GeneID:107937469"
ORIGIN      
        1 mrssplppyf lillvflihc siqvscfrfk fstfeidhik qlilsnsyiv vhalqvtpgl
       61 grssikntsg ravykkpfrl wkdshtiasf nttfvfniqn rtspggegla fiiagdstlp
      121 pcsegrwlgi vnsdpngspv vavefdtrks ddqdlddnhi glhinsinsn asvslthfgf
      181 nisgghdlwv llqydgqnlt vrvnetlvls qrldlssylp kkvfvgfsas tsnetqlncv
      241 kskefsgtdi ggegn
//
LOCUS       XP_016707186             240 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At1g21890 [Gossypium hirsutum].
ACCESSION   XP_016707186
VERSION     XP_016707186.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851697.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707186.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..240
                     /product="WAT1-related protein At1g21890"
                     /calculated_mol_wt=25588
     Region          <1..196
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..240
                     /gene="LOC107921865"
                     /coded_by="XM_016851697.2:1..723"
                     /db_xref="GeneID:107921865"
ORIGIN      
        1 makiigtait vmgamvmtly kgpiidfvks ggaihhgttt esadkhrvsg timllgsvfc
       61 rssffilqsf tlkkypaels lkawicfmgm legagvslvm vrdlsawkig wdsrllaaty
      121 sgvvcsgitf yvqgvvirkr gpvfvtsfsp lcmiitaalg aiilaeklhl gsilgaiiiv
      181 lglytvvwgk skdgkntetd eksnglqelp ltnndkaisv dvgirgadki vniptsknpf
//
LOCUS       XP_040942346             218 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942346
VERSION     XP_040942346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086412.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..218
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25060
     Region          <2..44
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..218
                     /gene="LOC121213614"
                     /coded_by="XM_041086412.1:1..657"
                     /db_xref="GeneID:121213614"
ORIGIN      
        1 mrdpklisyr klvlelikef editfcylpr yenqmadala tlasmikvnk hkdmkpiqmn
       61 iyedpahcyn ieegeiddsp wyqdilryvk nrqypgqate nekrtlrrla idyvldgeil
      121 ykrrkdqvll rcvdaveakk ileevhegic gthasgtstg atpfslvygm eavlsievei
      181 pslrvltelq ldeaewvqsr ydqlnliegk glkaihhg
//
LOCUS       XP_016706846             119 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PXR1-like [Gossypium hirsutum].
ACCESSION   XP_016706846
VERSION     XP_016706846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851357.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="protein PXR1-like"
                     /calculated_mol_wt=14809
     CDS             1..119
                     /gene="LOC107921513"
                     /coded_by="XM_016851357.1:1..360"
                     /db_xref="GeneID:107921513"
ORIGIN      
        1 mdcmeskset maglwtamek eylqriqpnv fqcektthkr raerdrkeke skgkrekeeq
       61 krrakeermn reekerrkrr eekdmknriq elekkkenek kriqelkkkq rekkksnkk
//
LOCUS       XP_016706843             289 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706843
VERSION     XP_016706843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851354.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..289
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33246
     Region          <1..42
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          79..173
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..289
                     /gene="LOC107921509"
                     /coded_by="XM_016851354.1:1..870"
                     /db_xref="GeneID:107921509"
ORIGIN      
        1 mesttlngrm arwqillsef eivyvnqkav krsaiakfla sraledykpl nfdlsneelm
       61 yvatveedsh edhplkqnfd gasntvdngi gavlvshtci mgiravidrt ikilevyeds
      121 alviyhlkvt rdpklicywk lvlklieefd sitfrylpre enqmadvlat qasivkvnkp
      181 edmkpiqisi hetpgpcysi eeeenddhsw yqdilryvkd ceyldhaten dkrtlrrlai
      241 dyvlnreily trgndqvllr cvdavetnki leevhegice thangftma
//
LOCUS       XP_016706842             108 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706842
VERSION     XP_016706842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12448
     Region          <4..91
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..108
                     /gene="LOC107921508"
                     /coded_by="XM_016851353.1:1..327"
                     /db_xref="GeneID:107921508"
ORIGIN      
        1 mellnliref erlqmkeses ikeyldklid iankvmvlkt nlsdrrlvqk klvfvpekye
       61 atisslentk dltqlsvvel istlqakeqr rllrqegsie galkakmq
//
LOCUS       XP_016707236             128 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DOWN-REGULATED IN DIF1 11 [Gossypium hirsutum].
ACCESSION   XP_016707236
VERSION     XP_016707236.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851747.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707236.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="protein DOWN-REGULATED IN DIF1 11"
                     /calculated_mol_wt=14246
     Region          <50..121
                     /region_name="Prolamin_like"
                     /note="Prolamin-like; cl05275"
                     /db_xref="CDD:471214"
     CDS             1..128
                     /gene="LOC107921951"
                     /coded_by="XM_016851747.2:1..387"
                     /db_xref="GeneID:107921951"
ORIGIN      
        1 maklnhnlsm viallssili aasmvtseee fmitippepe pgfyktieec iekmsrecge
       61 nivkavlede eiseqccael vhgmgkichd dllqfyvslp qlgfnvthln irghqvwnic
      121 ilkapskm
//
LOCUS       XP_040942348            1094 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942348
VERSION     XP_040942348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086414.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1094
                     /product="uncharacterized protein"
                     /calculated_mol_wt=123417
     CDS             1..1094
                     /gene="LOC121213615"
                     /coded_by="XM_041086414.1:205..3489"
                     /db_xref="GeneID:121213615"
ORIGIN      
        1 merreeqeqk qliwksepes mvsvtigrtm atllaarpkk lhhsisrlsp dssiksslds
       61 ldyslwflhk yvrdaaqrdg nldeilvpii qhslkykdsk hdnqpvilln wlfqdeflfq
      121 avamnlanii trkddryiaf gwctlvrglm eyenvmdqyl fngikekysa llkmlctcip
      181 hlsciarkgs tlqdkfelps rlsvaaadcl ltltegltkk pmlssrtksl kssesnlpvs
      241 llasniderk istvhkssev lnvgmedlfw dylqdliylv erllawsrks rplhakgleq
      301 vlkwlqeilv hygglqeeaq ilktrallls scwkhygmll hledkkfnkq ykelldqyls
      361 giqyytnnyv eghaeskdgg ietrkffinc lclllgrfdg kqlecvlldy gkqishvlls
      421 qlhcndedvi dgvvhifkvi ifktnnssgs tvtdtnqmds mvplllhlld erdaaaravv
      481 mliaeycsis tdghcleevl krldsgnaik rrnafdvise lvhiskdssh kahhstwqvi
      541 anhllgcley eeaaiqeqtp nllplidpsf vlpalvhlvc lseekaraaa sealfrvlkh
      601 hnqkpevicm mldslrnlsq dqadaeagac igkgsnfdcn rvlrlipews ktvqdwnali
      661 gplidkmfae psnativrfl scineqlaea advvlsrvvf qmkgqkgide dffsrwetkt
      721 cpsddsmrmq qslferlcpl livrllplrv fndlnssvvy gqlrnapfmh eygdvsvtgd
      781 dsvvaflvnr afsrfefedv rklaaelcgr ihpqvllplv csqlehates rdilkiiacl
      841 fsvctslvvr gkeslvhpfi lqiwrtikvi llwpssdgdq vskaqhgcid clalmicaes
      901 qapesfenct swrrniagkk gnrgcqlind esdisgsklp yencepvpvp frlcmanvli
      961 sacqkisnyg keplaktilp clidsvevet qpeiraafiq vmfsavyhlk lavlpysrdl
     1021 lklslkflgk rseqermaaa klmaslmtse dpilesishg lvearsvlsd ialndpsfdi
     1081 qqlckklatc itst
//
LOCUS       XP_040942349             246 aa            linear   PLN 06-AUG-2024
DEFINITION  tetraketide alpha-pyrone reductase 2 [Gossypium hirsutum].
ACCESSION   XP_040942349
VERSION     XP_040942349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086415.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..246
                     /product="tetraketide alpha-pyrone reductase 2"
                     /calculated_mol_wt=27293
     Region          <16..223
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(24,49,85,89)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..246
                     /gene="LOC121213616"
                     /coded_by="XM_041086415.1:1..741"
                     /db_xref="GeneID:121213616"
ORIGIN      
        1 mtvsfksfdk knplapeatl idpcikgtln vlrscskass vkrvvltssc ssiryrfdvq
       61 nqqisslnes hwsdpnyckr ynlfyayakt mgeqeawrva kesgmdlvvv npsfvvgpll
      121 apqptstlll ilsivkgmkg eypnttvgfv hiddviaahi lameeskasg rlvcsgpvah
      181 weqiiemlra kypsypfenk cssqegdnna hcmdtskiqq lglpefkslp qmfddciksf
      241 hdpgfl
//
LOCUS       XP_040942350             652 aa            linear   PLN 06-AUG-2024
DEFINITION  replication factor C subunit 3 [Gossypium hirsutum].
ACCESSION   XP_040942350
VERSION     XP_040942350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086416.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..652
                     /product="replication factor C subunit 3"
                     /calculated_mol_wt=74082
     Region          258..>487
                     /region_name="rfc"
                     /note="replication factor C small subunit; Reviewed;
                     PRK00440"
                     /db_xref="CDD:234763"
     CDS             1..652
                     /gene="LOC107925577"
                     /coded_by="XM_041086416.1:553..2511"
                     /db_xref="GeneID:107925577"
ORIGIN      
        1 mpspatiprr sssdpdltvt tsksktlivt ppssrssasv srgkkssywi swsnisklgd
       61 fidqrkkesd lteeslhehn klhgiyshkf rlnnfigdde vdekynkcsp yykgltdstl
      121 rinreknvsg adspgresqt ttvfstssss lsilfgkvqe lgsscftctr tgdyykdpdv
      181 lkpvkatnps lpvpcsntts mkdikpeike aednppdvql vfkekplrer vrepsaappt
      241 vtktvverke aevnqkfila dkyrpkalkd ficnrsealr vqdlvksgef shiifegpag
      301 vgkrtmmtav ireifgsdrv qtrdeckpyy lkgesvrrmd vniresskhv evnlsdlrgy
      361 ekhvivelmk etqpnkpfsy dpqnykaivl ceadklstda llyirwller ykagnkvffc
      421 csdisklqpi rslctvikll ppskqeivev vefiakqegi vlppkfgeri anssknnlrq
      481 airsfeacwq ssypfkedqi iltgweedia niaknmveer spkqlyiirg klqiliehdv
      541 spdfifmslv gevkkhlden lhpqvdvlyd eynrddenmi esedemgtkv idpvkknsri
      601 fsrieefiar fmswynnqsk manaaatffw ppvkglqyss hillaadegt sp
//
LOCUS       XP_040942351             168 aa            linear   PLN 06-AUG-2024
DEFINITION  momilactone A synthase-like [Gossypium hirsutum].
ACCESSION   XP_040942351
VERSION     XP_040942351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086417.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..168
                     /product="momilactone A synthase-like"
                     /calculated_mol_wt=17818
     Region          <1..153
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..168
                     /gene="LOC107928169"
                     /coded_by="XM_041086417.1:1..507"
                     /db_xref="GeneID:107928169"
ORIGIN      
        1 mfnnagipgd nevrvthatk dfkrvfdvnv lggflgakya arvmvlfkkg cilftaslas
       61 kisigltksl svqlgehgir vncispngiv tpafhkvign fdkkkgeemf avsavlkgtv
      121 ldpedfahaa lnlasneakf isgvnlpvdg aysvsnqswr mgfaalse
//
LOCUS       XP_040942352             222 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942352
VERSION     XP_040942352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086418.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26064
     Region          5..87
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..222
                     /gene="LOC121213617"
                     /coded_by="XM_041086418.1:1..669"
                     /db_xref="GeneID:121213617"
ORIGIN      
        1 mgneigvvlv spngdhypft wkldfdcmnn mteykacimg ewktrdpkli eyrrlvleli
       61 kefdditfcy lsrdenliad alatlasmvk mnkqedvkpi qvsiyeapah cynieeeekd
      121 dhpwyhdilr yvknreypnq aiendkrmlk ilandyvldr eilrcvdiie akkileevce
      181 gvcrthangf tmarqiirfg yyrsitkgdc isyarrchkc qi
//
LOCUS       XP_016714844             161 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714844
VERSION     XP_016714844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..161
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18033
     Region          1..159
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..161
                     /gene="LOC107928175"
                     /coded_by="XM_016859355.1:1..486"
                     /db_xref="GeneID:107928175"
ORIGIN      
        1 mgnclvleek vvrvmktdgk ileyrrpikv qqvlsdfsdr alsesfsacr nlhpdtkllp
       61 gmlyylvpsp sikskkkkvr fsstpevkdd eegshgvvri kliiskkele klvqkdgvsv
      121 hemvskmqsk qsingvdddd dgdddscrkw kpalesiaev n
//
LOCUS       XP_016714847             177 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF024 [Gossypium
            hirsutum].
ACCESSION   XP_016714847
VERSION     XP_016714847.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859358.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714847.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="ethylene-responsive transcription factor ERF024"
                     /calculated_mol_wt=18516
     Region          22..80
                     /region_name="AP2"
                     /note="DNA-binding domain found in transcription
                     regulators in plants such as APETALA2 and EREBP (ethylene
                     responsive element binding protein). In EREBPs the domain
                     specifically binds to the 11bp GCC box of the ethylene
                     response element (ERE), a promotor...; cd00018"
                     /db_xref="CDD:237985"
     Site            order(23..24,26,28,30,32,36,38,45,47,50)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..177
                     /gene="LOC107928178"
                     /coded_by="XM_016859358.2:1..534"
                     /db_xref="GeneID:107928178"
ORIGIN      
        1 mqynkgsssg ggsaatgrhp vykgvrrran gkwvseirep rkptriwlgt fptpemaaia
       61 ydvaalalkg rhaelnfpns aaslpvpast sptdiqaaat saaaalgaan dalvgsnspv
      121 saerpstgnd fvdedmifdm pnvlvnmaeg mllspprfdh pppgddsgds enlwkfp
//
LOCUS       XP_040942353             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942353
VERSION     XP_040942353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086419.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..399
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46284
     CDS             1..399
                     /gene="LOC121213618"
                     /coded_by="XM_041086419.1:1..1200"
                     /db_xref="GeneID:121213618"
ORIGIN      
        1 mrlsklglrq hnkrkwndei kqlfyssygd lpylldvkvd krlfralaqf wnsayccftf
       61 gsvdlvptve eytallrcsk iqvdkaysra anvltflkkl vnitrmseqw vvarikqkgd
      121 skcipwknlr dliqvhldmk krvdvfalsi yglvvfpkal ghideavtdl fdqldkgvtp
      181 vpailaetfr slnecrrvge grfigcaqll lawfhshfrk vdkfsyrvfs etysslkeiv
      241 eipmqdgale erwiailqnl qeediewrap wllsdeilyr cgdfdwvpll giwgaigyal
      301 llvlrqyrsr qfvpttqgla qselsykcdg ykkkiremtn awrqtrrlkr lsvgppmtpe
      361 yiswlgrrvn dnipvpgqgd sqlvekhvhm vpseleiik
//
LOCUS       XP_016684264             446 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684264
VERSION     XP_016684264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828775.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..446
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50099
     Region          185..>222
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..446
                     /gene="LOC107902627"
                     /coded_by="XM_016828775.1:1..1341"
                     /db_xref="GeneID:107902627"
ORIGIN      
        1 msqlaqllad kgkspvinsg vdqedpvyrp sftptsaqar ldmcpqiapv sirpqyrvga
       61 svpmhfqvgs gsnpgdnptn pvvpdlddma emekvrmdlp kqledrcrwl eekframent
      121 dyhcgvdakd lslvpdlvlp pkfkmpefek yngtsfpeah itmfcrrmtg yvnndqllih
      181 cfqdsligsa akwynqlshs nihswkdlar afmkqynhvp finhmlrsat mgfsdmvmsg
      241 emivnairsg kieagegakr stpkhkenev snlslynkgy skavtegqlr vvttgyqdts
      301 rqesnsrpnt erlqfthipv tykelyqklf dahvvapfys kpmqppypkw ydanakceyh
      361 agtmghsien cttfkklver finmgivkfd dpsgpnvagn plprhpdprv ntiaanggkr
      421 aktnvaevkt plkwvlkqmi dvglai
//
LOCUS       XP_016684688             667 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CNGC15b [Gossypium hirsutum].
ACCESSION   XP_016684688
VERSION     XP_016684688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829199.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..667
                     /product="protein CNGC15b"
                     /calculated_mol_wt=76174
     Region          44..>561
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          436..567
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(506..507,525..527)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(554..556,560..562)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..667
                     /gene="LOC107903156"
                     /coded_by="XM_016829199.2:44..2047"
                     /db_xref="GeneID:107903156"
ORIGIN      
        1 mtkknynqkt aighkkelsr vfsedyevve ktifdprgpd isrwnklflv aclislfvdp
       61 lflylpqekk glcvtvslpl eidltiirsv vdvfyvlqif irfrtayvap ssrvfgrgel
      121 vidpskiasr ylhkdfwldi iaaqplpqvl vwsvipklng spmvptknil rliiifqyll
      181 rlyliyplss qitkttgivt atawagaayn lmlymlashv lgatwyllsl erqeecwrkv
      241 cslppldcry eyfdcrsigd paraswfnas nisslcdpss nfyqfgiyan alrigitseg
      301 ffekyfyclw wglktlsslg qglststyvg eiifaiiiai lglvlfalli gnmqtylqst
      361 tvrleewrir rtdteqwmhh rqlphelrqn vrrydqykwv atrgvdeemi lkslpvdlrr
      421 dikrhlcldl vrqvplfdlm ddrmhdaice rlkpclytps tcivregdpv nemlfivrgy
      481 ldscttnggr tgffnsslig pgdfcgeell twaldprpgv vlpsstrtvk aiteveafal
      541 vsedlkfvas qfrklhskql khtfrfhshq wrtwaacfiq aawlrykrrk eadalkkwes
      601 mvtgsperma eqtaaaplsa aatgfasyaa klaastrsrg gssrcgndfd ilstlqkpne
      661 pdftver
//
LOCUS       XP_016684262             597 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684262
VERSION     XP_016684262.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828773.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684262.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..597
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67066
     Region          434..515
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(437,439,441,467..469,508)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            437..439
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            437
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(467..470,474..477)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..597
                     /gene="LOC107902625"
                     /coded_by="XM_016828773.2:1..1794"
                     /db_xref="GeneID:107902625"
ORIGIN      
        1 mynkgysksv tvsqpgkvaa tqqnssrqev strrnverpq ftpipmsyre lyrnlfdanv
       61 vslfylkplq ppypkwydan aqcdyhagit ghstenctaf kklverligm gvvkfddatk
      121 aenplpdhtd ggvnmvgedr rikadtadvk tplrrvwkem vkrglivseg scerkrnyce
      181 fhhevgheiq ectefraliq gmmdnwevkf cegvqeesdv caselalgvp kvnrpmviis
      241 rpqnsevger itpkviiqkp tvftykdnrr vpwnyncnvt ipgkkdmvsk edqdkgrhye
      301 qigeetlvrk kknvvkpell vnepikeeea reflkfikhs eysvveqlhk qparisvlal
      361 llnseghrna llnvlnetyv addisvnkld rlvgnisadn fisfsddeip pggmgstral
      421 hitamckgci lpgvlvdngs vlnvlplstl nrllvdsshm kscqnvvraf dgterkvmgr
      481 ieiplligpt vyevdflvmd ikpsyscllg rpwihsagav psslhqklkl vlegrvvtie
      541 aeediiasvt ndapylemsd daiecsfcsl efvnatfife gnkipmsris kttkmgl
//
LOCUS       XP_016684261             132 aa            linear   PLN 06-AUG-2024
DEFINITION  cytosolic sulfotransferase 6 [Gossypium hirsutum].
ACCESSION   XP_016684261
VERSION     XP_016684261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828772.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..132
                     /product="cytosolic sulfotransferase 6"
                     /calculated_mol_wt=15145
     Region          <26..132
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..132
                     /gene="LOC107902624"
                     /coded_by="XM_016828772.1:1..399"
                     /db_xref="GeneID:107902624"
ORIGIN      
        1 mhltivcpnl fwvpvmlklf tfvetpkdaf vsmfhfaakq rpkenehisi eeafelfcqg
       61 rsvfgpawdh ilvigklvkn drksfeeeqg gqvkklidlc sfenlsnldv nktgkrhedd
      121 deatnktffr kg
//
LOCUS       XP_016684259             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684259
VERSION     XP_016684259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828770.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15731
     CDS             1..136
                     /gene="LOC107902622"
                     /coded_by="XM_016828770.1:1..411"
                     /db_xref="GeneID:107902622"
ORIGIN      
        1 mdkswqligi pcphaccaiy hvneepddyl ytyyhketyl kayeyamqai nglhewkksg
       61 iqpvlppier nmpegtkknk rmakdepqkl kprqlsrrgl vmncrycgep ghnikskmdr
      121 sswtllcavs yehias
//
LOCUS       XP_016729852             463 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSK SIMULATOR 1 [Gossypium hirsutum].
ACCESSION   XP_016729852
VERSION     XP_016729852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874363.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..463
                     /product="protein PSK SIMULATOR 1"
                     /calculated_mol_wt=52526
     Region          44..100
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          312..403
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..463
                     /gene="LOC107940899"
                     /coded_by="XM_016874363.2:11..1402"
                     /db_xref="GeneID:107940899"
ORIGIN      
        1 mawrpagink ssnkshvsrh tkssssslsl ssssssscsp tlqilafeta kcmvrlvaly
       61 kslsddefhr lrngimkspg vvslnsddet yllslaceem lenldqaaai vsrlgkkcid
      121 velnkfdiay hnmkqgiida rtldfntehv vktidqmeky acstsvlyas lvgvdemeis
      181 krkkwrqnsg skidyfneei ssrrkqvihf rkislwnqtf dkivalmaqi vavifvrict
      241 vfepfvsslp citaknrnfn rlhynsnpks pkgvtfrlss itkidkfitk irymdvntek
      301 nqmlvqsape ntvgvaglav ryanviimae ayfysskmit ndareymfem lpmnlkqmlr
      361 gklkshwhkd aearegqqgv aegwkaalee ifewlapvah dtlqwqqern leqrnldakp
      421 tvlllqtlhf sdlerteaai veilvglsci yryenrgkrg gic
//
LOCUS       XP_016729851             137 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 3, mitochondrial-like
            [Gossypium hirsutum].
ACCESSION   XP_016729851
VERSION     XP_016729851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874362.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..137
                     /product="ATP-dependent zinc metalloprotease FTSH 3,
                     mitochondrial-like"
                     /calculated_mol_wt=15536
     Region          <13..119
                     /region_name="Peptidase_M41"
                     /note="Peptidase family M41; pfam01434"
                     /db_xref="CDD:460210"
     CDS             1..137
                     /gene="LOC107940898"
                     /coded_by="XM_016874362.1:1..414"
                     /db_xref="GeneID:107940898"
ORIGIN      
        1 mvfmpdecsr fvvllgkist gaqndlekvt kmtyaqvavy gfsdkaglls fprthyafem
       61 tmpyssttga iidsevrewv gkaydrtvql ieehkehvaq iaelllekdi lhqedlvrvl
      121 gerpfkssep tnydrfn
//
LOCUS       XP_040942354            1067 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040942354
VERSION     XP_040942354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086420.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1067
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=118735
     Region          3..>585
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          237..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          259..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          307..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..354
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..>975
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          378..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          403..426
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..500
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          501..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..574
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          575..598
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          599..620
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          621..645
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          646..669
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          670..694
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          695..718
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          719..740
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          743..766
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          767..792
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..890
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          891..914
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          915..936
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1067
                     /gene="LOC107939911"
                     /coded_by="XM_041086420.1:1..3204"
                     /db_xref="GeneID:107939911"
ORIGIN      
        1 mrmsffsllf lnsfvsvtfi vnvglvsaqc qsdqsrlllq lessfsynnd ssgklvpvkw
       61 nqntdccswd gvscdggghv igldlnsrsi sssiddsssl frlqhlqwln laynefnpaf
      121 psafdklenl sylnlshagf dgqipieisr ltrlvtldls tftfpglkle epnlgtlvrn
      181 vtrlkflyld gvnlsatgne wcqalsplte lqvlnmsgcy lsgpihssls mlrslsvihl
      241 dfnnlsasvp kffagfpnlt slsltytnls grlpdeifqi ptlqtldlsd ndllrgsfqk
      301 fspnlslqtl slsrtnfegq vpeslgnlgk ltrielaecn fsgaipktmk kltqlvyldf
      361 sfnrfsgpip sfsssrnlty lslgynqlng gihstdwssl skleivdlqk nkfsgtippa
      421 lfcipslqrl flsqnqfkgn lsdlhgkasl llegldlssn kfqgqfpmsv felhglklls
      481 lssnnysgsi pmsafqnlrn lsyldlsynr lsidvtdtdi ssisfptftt lklascnlme
      541 fpdflknqss lieldlsknq ihgkipnwiw katslehlnl sqnffvefqr plenitsnvr
      601 fldahgnqlq gqipilnayd vfyldysdnn fssilpphig dslrsasfls lannnfhgsi
      661 prsicnstsl dvldlsnnsl sgpipqclfq mtvslgvlnl rgnnlsgiis dtfpescklq
      721 tldlnqnrle gkvpkslgnc kmlevldidn nqingnfpch lkniatlhvl vlrsnkfngh
      781 idcpgnnsgw pllqifdlas nnfsgklhls glgtweamrp nqdknqsklk hlmfdlledd
      841 dqyyyqdait vtikgnelel vkiltvftsi discnnfegp ipevigkfna lyalnfshna
      901 ftgsipsffg klqqlesldl ssnslrgeip lqlanlnfls flnvsnnklv gpiptstqlq
      961 sfseasfenn aglcgpplkt kcgsspaked spsdsetgss iewnllsvvi gfifglgiii
     1021 vpliywkrwr iwyfervdra lsrlfprlgr etkkhgrrak qnqrrrt
//
LOCUS       XP_016728791             247 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728791
VERSION     XP_016728791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873302.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..247
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27888
     Region          <11..>199
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..247
                     /gene="LOC107939915"
                     /coded_by="XM_016873302.1:1..744"
                     /db_xref="GeneID:107939915"
ORIGIN      
        1 masestrisi kllidqernk ypyvsprkqr ltfrqtsnsg accgklmnrd vpgremdvvk
       61 detkgesmff ttdglvvmkg lpgnliqflh klgiknfhqi keevleidsy emsnllsysl
      121 vskttltdal lrkqrilsge ksllvapnme etveidvktr vkiilrksdr kilfaetsed
      181 fvdllfsflt ipfdselnip lvdveqqvis igqvealall kaclcssspl salknyivkk
      241 rkreplq
//
LOCUS       XP_040942355             265 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Gossypium hirsutum].
ACCESSION   XP_040942355
VERSION     XP_040942355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086421.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At3g47570"
                     /calculated_mol_wt=28167
     Region          <29..>260
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          41..64
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          65..88
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..265
                     /gene="LOC107939916"
                     /coded_by="XM_041086421.1:1..798"
                     /db_xref="GeneID:107939916"
ORIGIN      
        1 mtaanikanl qlsvcktear rikssfqhgg lpltvgklkn laafrvsrnr lsgllpnnlg
       61 scvhlealil ggnlfegpip sslsslrglv lldvsdnnls gdvpeflvsf galkylnlsf
      121 ndfeglipse gvfknksatf vegnnklcgg ipelhlsrcn sktssdtslk lkvaiivvil
      181 gvalvfscll ilwfrkkkel ptttcaensi lqlsyqsilr atdgfsvqnl lgsgsfgsvy
      241 kgileesgav iavkvlnlln rgass
//
LOCUS       XP_016728793             521 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Gossypium hirsutum].
ACCESSION   XP_016728793
VERSION     XP_016728793.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873304.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728793.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..521
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At3g47570"
                     /calculated_mol_wt=57493
     Region          50..>517
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          89..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          185..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..281
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          432..455
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          456..479
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          480..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..521
                     /gene="LOC107939917"
                     /coded_by="XM_016873304.2:1..1566"
                     /db_xref="GeneID:107939917"
ORIGIN      
        1 melstkhmev fnsfflvyie viiflscfnl lglatgspvv ggndtdhqal lqfkakitgy
       61 qlevmeswns sihfcqwrgv tcgrkhrrvt klelkhlkls gslspyvgnm sflrelklqg
      121 nrfyskipqe igrlrrpqil dltnnsisge ipsnlsacsk livvymggnq lageipallg
      181 hlsqvkflsf rnndlrgsip psfgnlssle elrlefnglt giipealgrl tnlsyfmvve
      241 naisgifpma mfnlsniiai digankiqgt lhfdlavtmp nveffsiwgn qisgqipiav
      301 wnasslntlq lnnnrltgnv pslekldkli vlelhanalg rgregdlkff ctlvnntkll
      361 dlfvgvnnfg galpkcisnf sstllhlsiy knkisgrild rignlinlel ldasenqlsg
      421 pipfdigrhq klqrfyidrn flsgtipdsi gnltmltavn lafnnlqgsi psslghcqnl
      481 lamslshnnl sgpippqafe lpflsifldl ksnyltgvle q
//
LOCUS       XP_040942356             649 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942356
VERSION     XP_040942356.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086422.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..649
                     /product="uncharacterized protein"
                     /calculated_mol_wt=73143
     Region          9..448
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     Region          <517..>576
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..649
                     /gene="LOC107939918"
                     /coded_by="XM_041086422.1:202..2151"
                     /db_xref="GeneID:107939918"
ORIGIN      
        1 mafktftssi kllidqernk vllaeagndf vdtlrsllkl plgnigllfr knkclltgcl
       61 dnlnnsvenl slssfrthac ykpvqyftck krgcgllsyy etsrcscgkl mnseiyleem
      121 erdavkdene ggfckvesrf fitddlrvmk glpgdliqfl nklgikdvnm navkeleigs
      181 keifnllshs liskttltdv flrkqgtmlv erplligpst kettakdgkt rvkimerksd
      241 rkilyaeane dfvdllfsll tiplesvlql vrdsllrlvp mqrwpckrkg qqavepsklk
      301 tlqdyswprr ifsflthplg svyefvtksk nskkvvlppf yscpneipdi csqqppaycl
      361 vtdsssknrr yylesainkr egplklldpk spepnttnss gyveknslfv itddlvvkpl
      421 ssvsgisflk eigvsvddve eqvisigeie avgllraclc sssalsdlmk altmltpdrv
      481 hgsaltllpw ctkwstflpm tavsrwspsv pcgkaeikgd smffitdelr vtkgltgdli
      541 qflhklgvkn vnknavkvlk lgpketaltd vflrqqrmmf veqfmhvapn ikettehggk
      601 arrqqqtalq sclygkpral lekqtqkqeq khmqmenkei ervilneks
//
LOCUS       XP_040942357             355 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942357
VERSION     XP_040942357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086423.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39431
     Region          18..335
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..355
                     /gene="LOC121213620"
                     /coded_by="XM_041086423.1:1..1068"
                     /db_xref="GeneID:121213620"
ORIGIN      
        1 menikgfvea msmasedstt vsikllidqe snkviinaea glragclnnl ynsvenlspt
       61 sfrtgacksm llnprsiyed kyskklklnm dvstavtees egepmlffit ddlrvmqalp
      121 gnlinfllnl siydvcqiee kvvdissnes mlgapnmket tekdsktrvk itlrksdrki
      181 lygeanedfv gllfsfltip lesalellgd kgnltvgsiy nlsknldttf sitkqknyqd
      241 gilppfyscp telpsissqk ptpcyylhry inqldpkspi lnktnsrgyl kkkslfvitd
      301 dlvvkslssv ssfkllketg tplcdveqev isigeveala llglvcvllq lyqly
//
LOCUS       XP_016684292             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684292
VERSION     XP_016684292.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828803.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684292.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24788
     Region          6..>223
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..223
                     /gene="LOC107902666"
                     /coded_by="XM_016828803.2:1..672"
                     /db_xref="GeneID:107902666"
ORIGIN      
        1 masedptkvs ikllidqesn kvivaeagsd ivdilrsllk fplgniarli gkhqclqrag
       61 clnnlynsve nlsltsfrtd ackpmllnpr siyedeyskk lklymdvsep tgyflcgtyl
      121 ciktgswfsh yktsrcscge lmdnptdige lkdsptdmcl kvgtvaykde segesmffmt
      181 ddlrvmhglp gdlmnillnl ginnvcqiee kvvdisskem snl
//
LOCUS       XP_016673415             131 aa            linear   PLN 06-AUG-2024
DEFINITION  josephin-like protein [Gossypium hirsutum].
ACCESSION   XP_016673415
VERSION     XP_016673415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016817926.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="josephin-like protein"
                     /calculated_mol_wt=14577
     CDS             1..131
                     /gene="LOC107892907"
                     /coded_by="XM_016817926.2:1..396"
                     /db_xref="GeneID:107892907"
ORIGIN      
        1 mlrrttikqv isspdddesp ktllkhggsg krrgkrrrvv vvamftlrlv krsfsparll
       61 rrlgdrvara lrlvsirrks lrkvsssnlp rsrslaesid shraeaiedc ieflnssssl
      121 srsnsvstcs c
//
LOCUS       XP_016671890            1016 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016671890
VERSION     XP_016671890.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816401.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016671890.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1016
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=111856
     Region          <37..351
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          223..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          247..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..>927
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          271..294
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          295..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          391..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          416..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..490
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          491..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          515..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          539..559
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          609..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..657
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          658..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          682..705
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          771..829
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          830..853
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          854..875
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1016
                     /gene="LOC107891561"
                     /coded_by="XM_016816401.2:1..3051"
                     /db_xref="GeneID:107891561"
ORIGIN      
        1 mdccswdgvs cdggghvigl dlsnraisss idgssslfrl qhlqrlnlaf nqfmtafpag
       61 fdklenlsyl nlsnvgftgq ipakisrltr lvtldlstds flsgeplkle kpnlemlvqn
      121 ltrlrflyld svnisatgne wcralsplte lqvlsmsncy lsgpihssls klqslsvicl
      181 dynnlsasvp qffaefpnlt slslsstglk grlpdeifqi ptlqtlylsy nmllkgsfpn
      241 fplnaslqal alsstkfggq ipesldnlgr ltrielagcn fsgpipkave kltqlvsldf
      301 snnnfsgpip sfsssrnltn lslahnklvg tihstdwssl sklenadlgg nklsgtippt
      361 lfgipslqrl dlshnqfngs igdfhdkass llntldlsnn klqgqfptsl felrgletlh
      421 lssnnfngli pmnafqnlgn lfsldlshnr lsidatatni sllsfptftg lglascnlte
      481 fpgflknqss lmyldlsnnh ihgkipdwiw kpidlarlnl sdnflvgfer plknitssve
      541 iidlhvnqlq geipiptlda tyldysdnnf ssvlpahigd slqhvsffsi snnnihgsip
      601 psicsstslr vldlsnnsls gpipqclfqm sgslgvldlr qnnlsgiisd tfskscklqt
      661 lklnqnrleg kvpkslgnck mlevldignn qindsfpwhl kniaklhvlv lrsnkfnghi
      721 dcsgnnggws mlqifdlasn nfsgklhltc lgtwdamqhn pysnllelkh lhfvdsgsgg
      781 gtryqdaiti ttkglelelv kilpvftsid iswnnfegli pevigkfkel hglnfshndf
      841 tgpipssfgn lrelesldls snslrgeipl qlanlnflsc lnvsnnklvg piptstqlqs
      901 fpeasfenna glcgpplktk cglppakedn psdsetgsii hwnhlsieig fifglgtiiv
      961 pliywkrwri wyferidhal srlfprlgre tkkhgrrakq sqrgrtqqrl vlrsre
//
LOCUS       XP_040942359             500 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040942359
VERSION     XP_040942359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086425.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=55159
     Region          8..>500
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          14..37
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          38..69
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          70..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          175..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          248..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..326
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          347..368
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          369..395
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          396..420
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          421..444
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          445..466
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          469..492
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..500
                     /gene="LOC107892565"
                     /coded_by="XM_041086425.1:1..1503"
                     /db_xref="GeneID:107892565"
ORIGIN      
        1 mtafptrfdk lenlrylnls eagftgqipi eishltrlvt lylsidtlfr tplklekqnl
       61 ktlvqnltkl rilylygvni samgnewcqa lspltelqvl smsdlirldr nnlsglipqf
      121 ftkfpnltcl rlssvnfsgp ipsfsssinl rdlilalnql ngtihstdws glskleiigl
      181 gnnklsgtip ptlfgipslr tlslshnqfn gsigdfhgka sslintldlg nnmlqgqfpm
      241 fvfelhglts lnlssnnfsg lipvsafqnl rnlsalglsy nrwsidatti nisslslptl
      301 aeldlascnl tefpgferpl knitssveil dlhgnqlqge ipilsnaayl dysnnnfnsv
      361 lpaqigdslq yafffslsnn niqgsipesi cnskylevld lsnnslsgpi pqclfqmnrs
      421 lgvlnlrrnn lsgiisdtss kscqlqtlnl nqnrlegkvp nslvnckmvk lldignnhin
      481 dsfpshlkni atlqqiqrlh
//
LOCUS       XP_040942360             167 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040942360
VERSION     XP_040942360.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086426.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=18973
     Region          7..>148
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..167
                     /gene="LOC121213621"
                     /coded_by="XM_041086426.1:1..504"
                     /db_xref="GeneID:121213621"
ORIGIN      
        1 mrtllfswll fnsffaiffs isnlvlvsgq cqsdqrqlll elnlsgrfrs tifatplgrl
       61 mkwnqtkdcc swegvscdag ghvigldlsi rgisspidds sslfrfqhlq rlnlafnwfk
      121 tsfptgfdkl enlsylnlsy sgfkgqipve isrltrlvtr ffcisnf
//
LOCUS       XP_040942361             451 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 49 [Gossypium hirsutum].
ACCESSION   XP_040942361
VERSION     XP_040942361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086427.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="receptor-like protein 49"
                     /calculated_mol_wt=50024
     Region          9..35
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          36..>450
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          36..58
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          59..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          84..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          108..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          212..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..250
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          256..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..398
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          399..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..451
                     /gene="LOC107891541"
                     /coded_by="XM_041086427.1:1..1356"
                     /db_xref="GeneID:107891541"
ORIGIN      
        1 mlvqnltrlr flyldgitis atgnelcrdl lpftklqvls msdcylsgpi pffssfknlr
       61 elnlgdnqls gtihstdwsg lskleivdls nnklsgtipp tlfgiqslrr lflsqnqfng
      121 sigdlhgkas sllgtldlss nklqgqfpmf vfelhgltll dlssnnfsgl ipmsafpnlr
      181 nlsdldlsyn rlsidapatn isppsfptyt alelascnlt efpgflknqy slnyldlsnn
      241 qihgeipnwi wksinlwyln isqnflvgfe spmkninsgi wildlhgnqv qgqvpilpsy
      301 atyldysdnn fsfvlpahig dslqfasffs lpnnnihgsi peslcnhtnl qvldlsnnst
      361 sgpipqclfq msrslgvlnl rrnnlsgiis dtfskscrlq tlnlnqnlle gevpkslgnc
      421 kmleildign nqindsfpcq lknitmlrvl v
//
LOCUS       XP_016727695             167 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 [Gossypium
            hirsutum].
ACCESSION   XP_016727695
VERSION     XP_016727695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872206.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="UPF0098 protein
                     CPn_0877/CP_0992/CPj0877/CpB0906"
                     /calculated_mol_wt=18508
     Region          12..164
                     /region_name="PEBP"
                     /note="Uncharacterized conserved protein,
                     phosphatidylethanolamine-binding protein (PEBP) family
                     [General function prediction only]; COG1881"
                     /db_xref="CDD:441485"
     CDS             1..167
                     /gene="LOC107938938"
                     /coded_by="XM_016872206.2:1..504"
                     /db_xref="GeneID:107938938"
ORIGIN      
        1 merassrslv fpsinhkgkl prkytdegqg akknlspple wynvpdgtqs malvvedida
       61 pdpsdpvkpw tcwvvanipp mlkglpegfs gkeeevggdy aclkkghndy kvpgwrgpkl
      121 pshghrfqfr lfaldeqlkl gnkvtkekll edieghvige aqvttmf
//
LOCUS       XP_016727696             120 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine proteinase inhibitor 1 [Gossypium hirsutum].
ACCESSION   XP_016727696
VERSION     XP_016727696.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872207.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727696.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="cysteine proteinase inhibitor 1"
                     /calculated_mol_wt=13322
     Region          37..118
                     /region_name="SQAPI"
                     /note="Aspartic acid proteinase inhibitor; pfam16845"
                     /db_xref="CDD:407092"
     Site            order(75..77,79)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     CDS             1..120
                     /gene="LOC107938941"
                     /coded_by="XM_016872207.2:1..363"
                     /db_xref="GeneID:107938941"
ORIGIN      
        1 maidfrarve vgvktlssfi lkggerkdal iegwtsikni kdphvteite favdehntql
       61 kgslkleevv kgetqvisgi nyklvlqakd gtadnsyeav vwekawlkfr kltsftlvkg
//
LOCUS       XP_040942363             174 aa            linear   PLN 06-AUG-2024
DEFINITION  elongator complex protein 5-like [Gossypium hirsutum].
ACCESSION   XP_040942363
VERSION     XP_040942363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086429.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..174
                     /product="elongator complex protein 5-like"
                     /calculated_mol_wt=19175
     CDS             1..174
                     /gene="LOC121213622"
                     /coded_by="XM_041086429.1:1..525"
                     /db_xref="GeneID:121213622"
ORIGIN      
        1 maesicralr dgalegelap aftiedsvts pfalqvfshv lsqlfssila gksqslglvv
       61 vsfsrnpsfy ldllknkgtd vassdkhdpl gwndqlagsg nstalsneal vsrtanvfre
      121 vkhmdklyns iielgkdiwt femllhmyei rewkmdhlkv ndgnstacpp rkrt
//
LOCUS       XP_016706460             341 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate mutase-like protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706460
VERSION     XP_016706460.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850971.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706460.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..341
                     /product="phosphoglycerate mutase-like protein 1 isoform
                     X1"
                     /calculated_mol_wt=37427
     Region          74..>267
                     /region_name="PhoE"
                     /note="Broad specificity phosphatase PhoE [Carbohydrate
                     transport and metabolism]; COG0406"
                     /db_xref="CDD:440175"
     Region          74..>145
                     /region_name="HP_PGM_like"
                     /note="Histidine phosphatase domain found in
                     phosphoglycerate mutases and related proteins, mostly
                     phosphatases; contains a His residue which is
                     phosphorylated during the reaction; cd07067"
                     /db_xref="CDD:132718"
     CDS             1..341
                     /gene="LOC107921104"
                     /coded_by="XM_016850971.2:253..1278"
                     /db_xref="GeneID:107921104"
ORIGIN      
        1 mtvsifynip spsssslssf scssscflsi asssipfsnp kkpiqlslsh tsaslsdmdv
       61 isspglyplh rcktlhlvrh aqgvhnvege kdhaaylses lfdahltplg wqqvdhlrkh
      121 ihetglskki elvivspllr tmqtavgvfg segykdgidv pplmvenage snrpaissln
      181 cppfvavelc rehlgvhpcd rrksiseyrl vfpaidfsli asdednlwea nsrekneeva
      241 vrgikflnwl wtrkereiai vthsgflyht lsvfgndchp svkseicthf ancelrsvvi
      301 vdrsmmgsdp attnypgkip sgldlpsdva deklsndgeg k
//
LOCUS       XP_040942364             314 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate mutase-like protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942364
VERSION     XP_040942364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086430.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="phosphoglycerate mutase-like protein 1 isoform
                     X2"
                     /calculated_mol_wt=34803
     Region          74..>267
                     /region_name="PhoE"
                     /note="Broad specificity phosphatase PhoE [Carbohydrate
                     transport and metabolism]; COG0406"
                     /db_xref="CDD:440175"
     Region          74..>145
                     /region_name="HP_PGM_like"
                     /note="Histidine phosphatase domain found in
                     phosphoglycerate mutases and related proteins, mostly
                     phosphatases; contains a His residue which is
                     phosphorylated during the reaction; cd07067"
                     /db_xref="CDD:132718"
     CDS             1..314
                     /gene="LOC107921104"
                     /coded_by="XM_041086430.1:253..1197"
                     /db_xref="GeneID:107921104"
ORIGIN      
        1 mtvsifynip spsssslssf scssscflsi asssipfsnp kkpiqlslsh tsaslsdmdv
       61 isspglyplh rcktlhlvrh aqgvhnvege kdhaaylses lfdahltplg wqqvdhlrkh
      121 ihetglskki elvivspllr tmqtavgvfg segykdgidv pplmvenage snrpaissln
      181 cppfvavelc rehlgvhpcd rrksiseyrl vfpaidfsli asdednlwea nsrekneeva
      241 vrgikflnwl wtrkereiai vthsgflyht lsvfgndchp svkseictqi lylyimdris
      301 pgpngivlwa dflc
//
LOCUS       XP_040942365             284 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate mutase-like protein 1 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942365
VERSION     XP_040942365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086431.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..284
                     /product="phosphoglycerate mutase-like protein 1 isoform
                     X3"
                     /calculated_mol_wt=31496
     Region          17..>210
                     /region_name="PhoE"
                     /note="Broad specificity phosphatase PhoE [Carbohydrate
                     transport and metabolism]; COG0406"
                     /db_xref="CDD:440175"
     Region          17..>88
                     /region_name="HP_PGM_like"
                     /note="Histidine phosphatase domain found in
                     phosphoglycerate mutases and related proteins, mostly
                     phosphatases; contains a His residue which is
                     phosphorylated during the reaction; cd07067"
                     /db_xref="CDD:132718"
     CDS             1..284
                     /gene="LOC107921104"
                     /coded_by="XM_041086431.1:206..1060"
                     /db_xref="GeneID:107921104"
ORIGIN      
        1 mdvisspgly plhrcktlhl vrhaqgvhnv egekdhaayl seslfdahlt plgwqqvdhl
       61 rkhihetgls kkielvivsp llrtmqtavg vfgsegykdg idvpplmven agesnrpais
      121 slncppfvav elcrehlgvh pcdrrksise yrlvfpaidf sliasdednl weansrekne
      181 evavrgikfl nwlwtrkere iaivthsgfl yhtlsvfgnd chpsvkseic thfancelrs
      241 vvivdrsmmg sdpattnypg kipsgldlps dvadeklsnd gegk
//
LOCUS       XP_016706461             284 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate mutase-like protein 1 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016706461
VERSION     XP_016706461.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850972.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706461.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..284
                     /product="phosphoglycerate mutase-like protein 1 isoform
                     X3"
                     /calculated_mol_wt=31496
     Region          17..>210
                     /region_name="PhoE"
                     /note="Broad specificity phosphatase PhoE [Carbohydrate
                     transport and metabolism]; COG0406"
                     /db_xref="CDD:440175"
     Region          17..>88
                     /region_name="HP_PGM_like"
                     /note="Histidine phosphatase domain found in
                     phosphoglycerate mutases and related proteins, mostly
                     phosphatases; contains a His residue which is
                     phosphorylated during the reaction; cd07067"
                     /db_xref="CDD:132718"
     CDS             1..284
                     /gene="LOC107921104"
                     /coded_by="XM_016850972.2:200..1054"
                     /db_xref="GeneID:107921104"
ORIGIN      
        1 mdvisspgly plhrcktlhl vrhaqgvhnv egekdhaayl seslfdahlt plgwqqvdhl
       61 rkhihetgls kkielvivsp llrtmqtavg vfgsegykdg idvpplmven agesnrpais
      121 slncppfvav elcrehlgvh pcdrrksise yrlvfpaidf sliasdednl weansrekne
      181 evavrgikfl nwlwtrkere iaivthsgfl yhtlsvfgnd chpsvkseic thfancelrs
      241 vvivdrsmmg sdpattnypg kipsgldlps dvadeklsnd gegk
//
LOCUS       XP_040942367             200 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-H1-1 [Gossypium hirsutum].
ACCESSION   XP_040942367
VERSION     XP_040942367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086433.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..200
                     /product="cyclin-H1-1"
                     /calculated_mol_wt=23185
     Region          3..172
                     /region_name="CYCLIN_AcCycH_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     H-type cyclin (CycH) and similar proteins; cd20585"
                     /db_xref="CDD:410288"
     Region          175..>199
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     CDS             1..200
                     /gene="LOC121213623"
                     /coded_by="XM_041086433.1:511..1113"
                     /db_xref="GeneID:121213623"
ORIGIN      
        1 madfhtsthr anwifspqel vekykaanqr aiqalekygt tqmevdadgs lsypepiard
       61 nadkhsrpkp lnieeeqfmr vfyenklrev csafyfpnki qataliyfkr fylqwsvmeh
      121 hpkhimltcv yaackieenh vsaeelgkgi sqdhqmilny emivsqslef dlivyapyrs
      181 vegfvndmei rtclrsgmeg
//
LOCUS       XP_040942368             527 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor PTL [Gossypium hirsutum].
ACCESSION   XP_040942368
VERSION     XP_040942368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086434.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..527
                     /product="trihelix transcription factor PTL"
                     /calculated_mol_wt=59894
     Region          8..>94
                     /region_name="PHA03420"
                     /note="E4 protein; Provisional"
                     /db_xref="CDD:177648"
     Region          112..177
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     Region          392..449
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     CDS             1..527
                     /gene="LOC121213624"
                     /coded_by="XM_041086434.1:181..1764"
                     /db_xref="GeneID:121213624"
ORIGIN      
        1 memedhrhhq yaipdlrqll ngkpinfqai pqdtelfspg hhrnlppsqq phhpfdvmqm
       61 vgrhefpsds tgntngtpma avatvtsast lspscgfdge atafggdggn grwprqetlt
      121 lleirshldp kfkeanqkgp lwdevsrvmf eehgyqrsgk kcrekfenly kyykktkegk
      181 agrqdgkhyr ffrqlealyg dtsnnngvlg qetplignsf qfhgaqnsin tqanqeiyhs
      241 qklcsdslsl sssskfdtcs sdnndlstak lkkkrgcrsw kakikefids qigklmerqe
      301 awlvkltktl eekeqervlr eeqwrkeaai ridrehkfwa kerawieard aalmealqnl
      361 agkqlkaass dgenhnengn gtinhtvkad gwqeaevsrl lqlrtametk fqqvgyseev
      421 vlweeiaakm gclgfersgl mckdkwdtig gaytlmktke snkkrkensr gfdyyqpnet
      481 iftqgpetlr lqpndgssha vsdscfrffm adgdnnlwen yglklsn
//
LOCUS       XP_016706543             284 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706543
VERSION     XP_016706543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..284
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31701
     Region          173..214
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..284
                     /gene="LOC107921176"
                     /coded_by="XM_016851054.2:262..1116"
                     /db_xref="GeneID:107921176"
ORIGIN      
        1 mrirkrqaql pfssispppl ssdpnfnqsp vvkhpplrqp pppadhpnhp irrqkptqgr
       61 dssafpettt shggeelkkk edylvlkqeg eeergengek snytarkknd fdeelgtgsl
      121 slqgvgkwce gekafplkkr rgsferimqk kddiindhny nsgkkkgrng almegsrcsr
      181 vngrgwrccq qtlvgyslce hhlgkgrlrs itsvrsrslg snnnniagkk eeqpplskqe
      241 ekplmtttik krvklgmvka rsissllgqn dnviavtddn ninn
//
LOCUS       XP_016706665             282 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein 8 [Gossypium hirsutum].
ACCESSION   XP_016706665
VERSION     XP_016706665.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851176.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706665.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..282
                     /product="zinc finger protein 8"
                     /calculated_mol_wt=31786
     Region          122..148
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..282
                     /gene="LOC107921299"
                     /coded_by="XM_016851176.2:144..992"
                     /db_xref="GeneID:107921299"
ORIGIN      
        1 mnplfyrshf rpilatflfp ffsllprfdf plqfssvqpk ekeaatsmek etrdfmnves
       61 fsqlpfirps pvkekgairl fgkdfgcgds ateatesynn nnnedttkdn engdnnnnss
      121 rrfechyccr nfptsqalgg hqnahkrerq hakrqhnnsf slsdahndiy gffnyrlpsp
      181 smpsmpayps wnntinarfs nppppingnp lgvwripatl qtnscnfnrd rssahplqlf
      241 agdeflpssq aggggdssse shryvyetka svkdnvsldl hl
//
LOCUS       XP_016706483             583 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g01740 [Gossypium
            hirsutum].
ACCESSION   XP_016706483
VERSION     XP_016706483.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850994.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="pentatricopeptide repeat-containing protein
                     At2g01740"
                     /calculated_mol_wt=65632
     Region          92..137
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          92..119
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          123..172
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          127..154
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          162..188
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <171..>561
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          196..223
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          229..258
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          264..293
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          299..325
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          334..363
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          369..398
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          404..429
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          436..463
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          469..498
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          504..533
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          539..568
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..583
                     /gene="LOC107921129"
                     /coded_by="XM_016850994.2:71..1822"
                     /db_xref="GeneID:107921129"
ORIGIN      
        1 miknsfkffs hlkkkkkask nfpepisyrt lsdsyfgspl qffsdlkkts kypdpysfnk
       61 llhkltasdc galslkllsf flskgytphp ssfnstisff cklghssyaq klvnlmplyg
      121 cepdiatyns lidgyfkcge vvkaclivne irvdkckpdl vtfnvlfngf ckmrkkkeaf
      181 vymglmwkcc lpnvvtystw idmfckvgdl nmgvkvfrdm kkdkvllnsi vftclidgcc
      241 kvgdfeaafe lckemklakl avnvvtytal idglckkgml eraeclffrm lkdkvkpnsv
      301 vytsiidahf kksnvtdalk ylgkmyvqgl efdmaaygvi iaglcntgmf dkasiymenm
      361 vksglrpdkl mlttimdahf kagnvkaaln vygeilargf dpdvivltsl mdglckhgcl
      421 neaesyfcrg kankisytvl invlakkgdf telnrvfrem leagftadky vytswiaglc
      481 eqgnlieafr vknrmvqegf qpdlltyssl ifglankglm ieakqifedm lkrqitpdaa
      541 vyeimirgyl rqdneaavtg lleemekrgf skatckvggn efq
//
LOCUS       XP_016706484             583 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g01740 [Gossypium
            hirsutum].
ACCESSION   XP_016706484
VERSION     XP_016706484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850995.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="pentatricopeptide repeat-containing protein
                     At2g01740"
                     /calculated_mol_wt=65632
     Region          92..137
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          92..119
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          123..172
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          127..154
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          162..188
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <171..>561
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          196..223
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          229..258
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          264..293
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          299..325
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          334..363
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          369..398
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          404..429
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          436..463
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          469..498
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          504..533
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          539..568
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..583
                     /gene="LOC107921129"
                     /coded_by="XM_016850995.2:71..1822"
                     /db_xref="GeneID:107921129"
ORIGIN      
        1 miknsfkffs hlkkkkkask nfpepisyrt lsdsyfgspl qffsdlkkts kypdpysfnk
       61 llhkltasdc galslkllsf flskgytphp ssfnstisff cklghssyaq klvnlmplyg
      121 cepdiatyns lidgyfkcge vvkaclivne irvdkckpdl vtfnvlfngf ckmrkkkeaf
      181 vymglmwkcc lpnvvtystw idmfckvgdl nmgvkvfrdm kkdkvllnsi vftclidgcc
      241 kvgdfeaafe lckemklakl avnvvtytal idglckkgml eraeclffrm lkdkvkpnsv
      301 vytsiidahf kksnvtdalk ylgkmyvqgl efdmaaygvi iaglcntgmf dkasiymenm
      361 vksglrpdkl mlttimdahf kagnvkaaln vygeilargf dpdvivltsl mdglckhgcl
      421 neaesyfcrg kankisytvl invlakkgdf telnrvfrem leagftadky vytswiaglc
      481 eqgnlieafr vknrmvqegf qpdlltyssl ifglankglm ieakqifedm lkrqitpdaa
      541 vyeimirgyl rqdneaavtg lleemekrgf skatckvggn efq
//
LOCUS       XP_040942370              76 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942370
VERSION     XP_040942370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086436.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..76
                     /product="uncharacterized protein"
                     /calculated_mol_wt=8139
     CDS             1..76
                     /gene="LOC107916964"
                     /coded_by="XM_041086436.1:195..425"
                     /db_xref="GeneID:107916964"
ORIGIN      
        1 mgcfacfdgg nreqrkeqdr lasaearaka aeaaqrrqeq feksaagraa raqlqaaakq
       61 stnsnkgepa lkwqmg
//
LOCUS       XP_016706659             372 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SRG1 [Gossypium hirsutum].
ACCESSION   XP_016706659
VERSION     XP_016706659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851170.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="protein SRG1"
                     /calculated_mol_wt=42768
     Region          15..359
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..372
                     /gene="LOC107921295"
                     /coded_by="XM_016851170.2:102..1220"
                     /db_xref="GeneID:107921295"
ORIGIN      
        1 mesptdaefv nfgksiilps vqelakdpia kipprylrpl qeqphsispn hhlpsvpiid
       61 lqklaagdfv dselrrlhsa ckkwgffqvv nhsvsislle dfkleienff klphedkkll
      121 wqkpdnhegf gqlfvvsedq kldwsdmfyi ttlphnlrni elfeklplkl rqamemysie
      181 vknlalrild fmaralnmgt eemrelfndg iqsmrinyyp pcpepdmtig fsphsdadal
      241 tilfqlsete glqvrkdgkw vsikplpnal vvnigdimei fsngiyrsie hravvnstke
      301 rlsiatfyss kldselgpal sligpsnpai frrvhlekyf keffarrlng ksyldfmrik
      361 teeenedckn kt
//
LOCUS       XP_016706682             521 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein VAR3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706682
VERSION     XP_016706682.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706682.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..521
                     /product="zinc finger protein VAR3, chloroplastic"
                     /calculated_mol_wt=59559
     Region          292..318
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          296..315
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          338..360
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          340..359
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          370..397
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          373..392
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     CDS             1..521
                     /gene="LOC107921315"
                     /coded_by="XM_016851193.2:203..1768"
                     /db_xref="GeneID:107921315"
ORIGIN      
        1 mkklfrssyn efmytalkih fqnfgfplvt nsyvhnftkt lhsnskfdvv lnelaelhpp
       61 kpsshaaqsp sgmdvsfdhe rptkrnesav qishpwqewv dlmecllrrg yfdgdgnpfe
      121 ngqlgskean sirtaclnfa rdrfsliryf srkdiqvivg cgcpsldrkv vnsgkrlrah
      181 vgidegnvcs scnlrgscdr ayvkaredqg grtvdvmril ltygldsits svenkpcqnk
      241 svkesvrall kemvdygskd qqadmpnaap srgdaslhdh sstqghikvp mkpgdwlcpk
      301 cnflnfarni kclrcdglfe erlrqlredq dhlplkkgdw icercnflnf aknticlqck
      361 enppkrhlnp gewecescny infrrnmvcl kcdhkrpkvp nasgtctgef egsigkytrr
      421 dgkqsknsdr wrfvhedned eecldsrten skfidfpitr srttwslntg kcestlemea
      481 knkslstvmq ndgskctdsq rklellecsd deemsgwfrr r
//
LOCUS       XP_040942372             521 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein VAR3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040942372
VERSION     XP_040942372.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086438.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..521
                     /product="zinc finger protein VAR3, chloroplastic"
                     /calculated_mol_wt=59559
     Region          292..318
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          296..315
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          338..360
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          340..359
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          370..397
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          373..392
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     CDS             1..521
                     /gene="LOC107921315"
                     /coded_by="XM_041086438.1:101..1666"
                     /db_xref="GeneID:107921315"
ORIGIN      
        1 mkklfrssyn efmytalkih fqnfgfplvt nsyvhnftkt lhsnskfdvv lnelaelhpp
       61 kpsshaaqsp sgmdvsfdhe rptkrnesav qishpwqewv dlmecllrrg yfdgdgnpfe
      121 ngqlgskean sirtaclnfa rdrfsliryf srkdiqvivg cgcpsldrkv vnsgkrlrah
      181 vgidegnvcs scnlrgscdr ayvkaredqg grtvdvmril ltygldsits svenkpcqnk
      241 svkesvrall kemvdygskd qqadmpnaap srgdaslhdh sstqghikvp mkpgdwlcpk
      301 cnflnfarni kclrcdglfe erlrqlredq dhlplkkgdw icercnflnf aknticlqck
      361 enppkrhlnp gewecescny infrrnmvcl kcdhkrpkvp nasgtctgef egsigkytrr
      421 dgkqsknsdr wrfvhedned eecldsrten skfidfpitr srttwslntg kcestlemea
      481 knkslstvmq ndgskctdsq rklellecsd deemsgwfrr r
//
LOCUS       XP_040942373             745 aa            linear   PLN 06-AUG-2024
DEFINITION  NADPH--cytochrome P450 reductase [Gossypium hirsutum].
ACCESSION   XP_040942373
VERSION     XP_040942373.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086439.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..745
                     /product="NADPH--cytochrome P450 reductase"
                     /calculated_mol_wt=83163
     Region          139..282
                     /region_name="Flavodoxin_1"
                     /note="pfam00258"
                     /db_xref="CDD:425562"
     Region          341..745
                     /region_name="CYPOR"
                     /note="NADPH cytochrome p450 reductase (CYPOR) serves as
                     an electron donor in several oxygenase systems and is a
                     component of nitric oxide synthases and methionine
                     synthase reductases. CYPOR transfers two electrons from
                     NADPH to the heme of cytochrome p450 via...; cd06204"
                     /db_xref="CDD:99801"
     Site            order(363,543,545,603..604,635..636,665..666,671,673,675,
                     700,704,707)
                     /site_type="other"
                     /note="NADP binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(384,523..526,541..543,557..560,745)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(523,525..526)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(526,698,743,745)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:99801"
     Site            order(557,560,563)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99801"
     Site            order(599,603..606,608)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99801"
     CDS             1..745
                     /gene="LOC107922644"
                     /coded_by="XM_041086439.1:53..2290"
                     /db_xref="GeneID:107922644"
ORIGIN      
        1 mwsslcrfgl lshykyslns pffpssdqps stfyfdfhfk lfsfsvcvsv lkmssrsglv
       61 sfvesvlgms lggsvtdsml miattslavi lvfliflwkn lvsqrspdvk llvaskpvsl
      121 kvdedddalv asgkkkvtif ygtqtgtaeg fakalaeeik aryekaavka vdlddyavdd
      181 eeyeeklkke tsaffmvaty gdgeptdnsa rfykwftegn erqswlqrlt ygvfglgnrq
      241 yehfnkiakv ldeklseqga krlievglgd ddqcieddft awrellwpel dqllrdedde
      301 ntastpytaa ipkyrvvihd psmmriednh snmengnasl dihhpcrvnv avqrelhkpe
      361 sdrscihlef ditgtsitye tgdhvgvyad nsietieeaa rllgqpldll fsihtdnedg
      421 mpsgsslppp fsspctlkta laryadllnp prkaalvala ahatepseae rlrflsspqg
      481 kdeysqwvvg sqrsllevma qfpsakppig vffaaiaprl qpryysisss prfvsgrihv
      541 tcalvygptp trrihrgvcs twmknavsle knsdcsgapi firqsnfklp adpsipiimv
      601 gpgtglapfr gflqervvlk edgaelgpsl lffgcrnrkm dfiyedelnn lveqgalsel
      661 ivafsregpq keyvqhkmmd kaahiwslis kggylyvcgd akgmardvhr tlhtivqeqg
      721 nmesskaesm vkklqmegry lrdvw
//
LOCUS       XP_040942374             144 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIC236, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040942374
VERSION     XP_040942374.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086440.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..144
                     /product="protein TIC236, chloroplastic"
                     /calculated_mol_wt=15908
     CDS             1..144
                     /gene="LOC107922603"
                     /coded_by="XM_041086440.1:16..450"
                     /db_xref="GeneID:107922603"
ORIGIN      
        1 mllqpdsvtr llpllaviai plvkwrlgip psfpifysil cphlpsvpsi lrrfpsraks
       61 advekemeqv nispsldvrl sdlklvlgte lrivypliln favsgelefn gqahpkwikp
      121 kgiltfengd vnlvatqaar vfes
//
LOCUS       XP_016707822             673 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707822
VERSION     XP_016707822.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707822.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..673
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70770
     Region          205..253
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(205..207,225,227..228,239,241..243,245..247,
                     249..250)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..673
                     /gene="LOC107922340"
                     /coded_by="XM_016852333.2:324..2345"
                     /db_xref="GeneID:107922340"
ORIGIN      
        1 miqntkkqkk gsiseedist llqrytattv lallqevaqf pgvkldwnal vkktstgisn
       61 areyqmlwrh layrdvllek ledgadpldd dsdleyelep cpsvssetsa eaaacvkvli
      121 asglpndssl anssmvdapl tinipnarsf rvssenlqps csmpgtnitv pvsvqkkilp
      181 svtsaetmeg ngpaganlpa rrkrkpwsea edleliaavq kcgvgnwani lrgdfkgdrt
      241 asqlaqrwtv ikkrcgnlnv egnsaipqls eaqlatrsal slaldmpdkn ltaactnnpg
      301 lkimsssapp taggeasaqa qsqvqqgpla sveapiqsqq gpiasvssrn rsqegpitsa
      361 spqnpsqqgp vasvqvpnqs qqgsmprkts prgssgstlk srvtlkkapa kpfsttgsil
      421 datavaagar igspeaaasl lkaaqsknai himttagssv kpvipsgtss qyvctgltae
      481 ahsspvtsst lhpgsvktat qrvehtssvs lsinapmqqc navtsgtave vspkedleik
      541 gsvsdslpke qvrenrayvp knergeevke hkealtnpgs elknieavve hpneklmvdg
      601 dqvgvkanlv eesvnasdik dcllvkkstt qptaeescrn hsmtemtaka gslsdgcakn
      661 levlstaetg rat
//
LOCUS       XP_016706977             500 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NETWORKED 2A-like [Gossypium hirsutum].
ACCESSION   XP_016706977
VERSION     XP_016706977.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851488.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="protein NETWORKED 2A-like"
                     /calculated_mol_wt=57294
     Region          <41..>349
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..500
                     /gene="LOC107921661"
                     /coded_by="XM_016851488.2:630..2132"
                     /db_xref="GeneID:107921661"
ORIGIN      
        1 mededddnfn qtstssihsn kprlpkgqtl kkdfrdrsmi lseegqlkka vrfqtsglnk
       61 dealeeidkl qkemlalqte refmkssyey gykkfkeien qitekqkrvc dlqdefgirs
      121 vidnnegrsl manqalkscq eslntlkekh elsskvarae srrikhvnhk fealrnkfns
      181 pqtnqqekhk rvsstaeldn maydidnean qredteasdq qekhkhisst tepdsvahni
      241 dneenesqdl ealqkeneek lqvdlneslt mpelvkkidd lvkrvirlea avfsekalik
      301 rlkseadelq eqvktleedk ealiegsdam kktidelege lsrvkdlvkt vldqnnslkt
      361 hfteaicnvn hlsvklhele aigldakadr gteeyeilpa pdhssplkdt gtkleedknv
      421 saegennvdd essynkadgd sekgqelegk nkaekeylpe tesivpdtel eelesdeeeq
      481 pnwrqlylkg qddrekilrd
//
LOCUS       XP_016706511             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706511
VERSION     XP_016706511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851022.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18912
     CDS             1..170
                     /gene="LOC107921148"
                     /coded_by="XM_016851022.2:702..1214"
                     /db_xref="GeneID:107921148"
ORIGIN      
        1 malafthlsw wlwsgkhqep rtpngsslss spdtglwesd nlkfprikra nmasssrrvk
       61 rkrhsreerk idreydvvlv psdggcvsgs esdgsdysig wlephgpgfh sddgsdnsfa
      121 vlvpcyehse dnmvvdsknk ilgaivnipd nysaeskkyv eqwlsslqan
//
LOCUS       XP_040942375             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942375
VERSION     XP_040942375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086441.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18912
     CDS             1..170
                     /gene="LOC107921148"
                     /coded_by="XM_041086441.1:288..800"
                     /db_xref="GeneID:107921148"
ORIGIN      
        1 malafthlsw wlwsgkhqep rtpngsslss spdtglwesd nlkfprikra nmasssrrvk
       61 rkrhsreerk idreydvvlv psdggcvsgs esdgsdysig wlephgpgfh sddgsdnsfa
      121 vlvpcyehse dnmvvdsknk ilgaivnipd nysaeskkyv eqwlsslqan
//
LOCUS       XP_040942376             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942376
VERSION     XP_040942376.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086442.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18912
     CDS             1..170
                     /gene="LOC107921148"
                     /coded_by="XM_041086442.1:265..777"
                     /db_xref="GeneID:107921148"
ORIGIN      
        1 malafthlsw wlwsgkhqep rtpngsslss spdtglwesd nlkfprikra nmasssrrvk
       61 rkrhsreerk idreydvvlv psdggcvsgs esdgsdysig wlephgpgfh sddgsdnsfa
      121 vlvpcyehse dnmvvdsknk ilgaivnipd nysaeskkyv eqwlsslqan
//
LOCUS       XP_016707951             525 aa            linear   PLN 06-AUG-2024
DEFINITION  argininosuccinate lyase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707951
VERSION     XP_016707951.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707951.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..525
                     /product="argininosuccinate lyase, chloroplastic"
                     /calculated_mol_wt=58517
     Region          49..521
                     /region_name="PLN02646"
                     /note="argininosuccinate lyase"
                     /db_xref="CDD:215348"
     CDS             1..525
                     /gene="LOC107922428"
                     /coded_by="XM_016852462.2:108..1685"
                     /db_xref="GeneID:107922428"
ORIGIN      
        1 meslrssslq tpfffsqstv lsnksvsnpr tisplmhrak srfeplrctt shsseteakp
       61 ketklwggrf edsvtdivek ftesisfdkq lykhdimgsk ahasmlaeqg lisfsdrdsi
      121 lkgldeierr ieagefvwrt dredvhmnie aaltdlvgep akklhtarsr ndqvltdfrl
      181 wcrdaidrii ssirhlqval vklalnnegl iipgythlqr aqpvllqhll layveqldrd
      241 agrlldcrar lnfcplgaca lagtglpidr fmtsealgft apmrnsidav sdrdfvlefl
      301 sansiiavhl srigeewvlw aseefgfitp sdsvstgssi mpqkknpdpm elvrgksarv
      361 igdlvtlltl ckglplaynr dlqedkeptf dsvktitgml evsaefaqni tfndkrirka
      421 lpagyldatt ladylvkkgi pfrtshdivg rsvalcvskn cqlqdlsled mrnlspvfdn
      481 dvyefigven avkkfssygs tgfacvadql ddwaaklein kstch
//
LOCUS       XP_016707969             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707969
VERSION     XP_016707969.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852480.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..399
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45156
     Region          79..396
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..399
                     /gene="LOC107922439"
                     /coded_by="XM_016852480.2:139..1338"
                     /db_xref="GeneID:107922439"
ORIGIN      
        1 mlgtgwgfrr vrgedrfynp akarrsyqkq qtdqlrraqs dytvsqsnvt wesekglgst
       61 dppkpvlipv sepvvsplsn lerfldsvip svpalylskr tmrgwrtydg efqpyfvlgd
      121 lwesfkewsa ygagvpliln dcdsvvqyyv pylsgiqiyv dsvklsaksr qpiqdsdsdf
      181 rdsssdgssd cepergsnvl retrnhymas emslrmdrls mgdqqilqed lssdegelvn
      241 ssclifeyfe rdppysrepl adkiadlafq fpelktlksc dllssswisv swypiyript
      301 gptlkdldac fltyhclhtp igggesaqap fitcpndmdd vpkmslpvfg lasykfkgsl
      361 wtpngttdch lanslfqaad nwlrllhvnq pdftffcrr
//
LOCUS       XP_016706788             427 aa            linear   PLN 06-AUG-2024
DEFINITION  protein UNUSUAL FLORAL ORGANS [Gossypium hirsutum].
ACCESSION   XP_016706788
VERSION     XP_016706788.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851299.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706788.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..427
                     /product="protein UNUSUAL FLORAL ORGANS"
                     /calculated_mol_wt=47678
     Region          38..76
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(41..42,44..46,49..50,53,64..66,68,71)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(41,45,48..49,52..53,57,59..60,64..66,68)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     CDS             1..427
                     /gene="LOC107921451"
                     /coded_by="XM_016851299.2:334..1617"
                     /db_xref="GeneID:107921451"
ORIGIN      
        1 mdafntsmpl pfsytftits sscntsthtn pwmdvriwsk lperlldrvi aflpppaffr
       61 arsvckrwyg llycssflel ymqispshhw flflkhrtlk syicrantss ggngdnrtnc
      121 egylfdpcda awyrlsfnlv psgfypasss gglvcwvsde agaknlilfn plvdsliqlp
      181 ptlrprlfps igltvsptsv dvtvagddli spyavknlst esfhidaggf ysiwgttssl
      241 prlcslesgr mvhvdgkfyc mnynpfsvla ydmaankwfk iqapmrrflr spglvesrgk
      301 lilvaaveks klnvpkslrl wglqdcgttw veiermplql ymqfaevegg ngfdpvghge
      361 fivimirgsd kgllfdicrk rwrwipacpy lgssgcanng edaelrglay eprlatpvis
      421 llscftg
//
LOCUS       XP_040942377             101 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942377
VERSION     XP_040942377.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086443.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..101
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11318
     CDS             1..101
                     /gene="LOC107921434"
                     /coded_by="XM_041086443.1:696..1001"
                     /db_xref="GeneID:107921434"
ORIGIN      
        1 msdvedetfn tvvsrssqtc ridlleeiie dakdnkkilf qtmqsimnlm kevelqeaaa
       61 eqakeeaarg gmdilvkvee lkqmlphake andmvvhlli t
//
LOCUS       XP_016706772             101 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706772
VERSION     XP_016706772.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851283.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706772.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..101
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11318
     CDS             1..101
                     /gene="LOC107921434"
                     /coded_by="XM_016851283.2:430..735"
                     /db_xref="GeneID:107921434"
ORIGIN      
        1 msdvedetfn tvvsrssqtc ridlleeiie dakdnkkilf qtmqsimnlm kevelqeaaa
       61 eqakeeaarg gmdilvkvee lkqmlphake andmvvhlli t
//
LOCUS       XP_040942378             467 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942378
VERSION     XP_040942378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086444.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..467
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=50476
     Region          <229..244
                     /region_name="VQ"
                     /note="VQ motif; pfam05678"
                     /db_xref="CDD:461711"
     CDS             1..467
                     /gene="LOC107921285"
                     /coded_by="XM_041086444.1:283..1686"
                     /db_xref="GeneID:107921285"
ORIGIN      
        1 mfgnyhrkls ylgenqkers gsiseelgsf slyehgnflk avlerysiie vlamdsgnss
       61 smisssggde eydsrpesva aflnasshfn plsnqqpslv hhqnqpltff dpipslnyfn
      121 qfsqsqprns llnfdgvrpr msmrsepnci efnnlpgssl ssqsiigsqg fnqgsfpstt
      181 smqstsvhen gvrsstqsdq ktsvvknpkk rtrasrrapt tvlttdttnf ramvqeftgi
      241 pappfsgssy srrldlfgsg srsshlepla slyplcpsak rvqttpfvss ssplldaani
      301 tnttsdttvn ptafnpsssn yqlpgdigli kephnmsnlq nqspilsfqs fldppplhps
      361 lnlpgfgvks qgssampsid elglshghgn asvgglqshg vglndgnqeh lrpldgsygn
      421 tdhnshrvns ckmnysasss afhhdkgldt vssrtegtld swicpae
//
LOCUS       XP_016706647             414 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706647
VERSION     XP_016706647.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851158.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706647.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..414
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=44382
     Region          <176..191
                     /region_name="VQ"
                     /note="VQ motif; pfam05678"
                     /db_xref="CDD:461711"
     CDS             1..414
                     /gene="LOC107921285"
                     /coded_by="XM_016851158.2:158..1402"
                     /db_xref="GeneID:107921285"
ORIGIN      
        1 mdsgnsssmi sssggdeeyd srpesvaafl nasshfnpls nqqpslvhhq nqpltffdpi
       61 pslnyfnqfs qsqprnslln fdgvrprmsm rsepnciefn nlpgsslssq siigsqgfnq
      121 gsfpsttsmq stsvhengvr sstqsdqkts vvknpkkrtr asrrapttvl ttdttnfram
      181 vqeftgipap pfsgssysrr ldlfgsgsrs shleplasly plcpsakrvq ttpfvssssp
      241 lldaanitnt tsdttvnpta fnpsssnyql pgdiglikep hnmsnlqnqs pilsfqsfld
      301 ppplhpslnl pgfgvksqgs sampsidelg lshghgnasv gglqshgvgl ndgnqehlrp
      361 ldgsygntdh nshrvnsckm nysasssafh hdkgldtvss rtegtldswi cpae
//
LOCUS       XP_016707933             207 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
            beta isoform isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707933
VERSION     XP_016707933.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852444.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform isoform X1"
                     /calculated_mol_wt=23493
     Region          <11..79
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     Region          <79..>205
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     CDS             1..207
                     /gene="LOC107922416"
                     /coded_by="XM_016852444.2:328..951"
                     /db_xref="GeneID:107922416"
ORIGIN      
        1 msyqpcdser ellpstelke ewklanapkn dkfqythfvh kinsfdtapn kllasdshlr
       61 pdryaleqgd lskagfekss dgetfisadd lrinlwnlei snqtfnivdv kpvnmedltg
      121 kpilfwyfsl llsllkayas svlfnifakv mvivmsiiak vitsadfhpt hcnmlaysss
      181 kssirlidlr qsalcdshak lqvfyrf
//
LOCUS       XP_016707934             145 aa            linear   PLN 06-AUG-2024
DEFINITION  oxysterol-binding protein-related protein 3A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707934
VERSION     XP_016707934.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852445.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="oxysterol-binding protein-related protein 3A
                     isoform X2"
                     /calculated_mol_wt=16664
     Region          <11..79
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     Region          <79..>119
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     CDS             1..145
                     /gene="LOC107922416"
                     /coded_by="XM_016852445.2:328..765"
                     /db_xref="GeneID:107922416"
ORIGIN      
        1 msyqpcdser ellpstelke ewklanapkn dkfqythfvh kinsfdtapn kllasdshlr
       61 pdryaleqgd lskagfekss dgetfisadd lrinlwnlei snqtfnivdv kpvnmedltd
      121 fgiryelgdh qkalshyrql llvly
//
LOCUS       XP_016707935             137 aa            linear   PLN 06-AUG-2024
DEFINITION  oxysterol-binding protein-related protein 3A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707935
VERSION     XP_016707935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852446.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..137
                     /product="oxysterol-binding protein-related protein 3A
                     isoform X3"
                     /calculated_mol_wt=15658
     Region          <11..79
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     Region          <79..>119
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     CDS             1..137
                     /gene="LOC107922416"
                     /coded_by="XM_016852446.2:328..741"
                     /db_xref="GeneID:107922416"
ORIGIN      
        1 msyqpcdser ellpstelke ewklanapkn dkfqythfvh kinsfdtapn kllasdshlr
       61 pdryaleqgd lskagfekss dgetfisadd lrinlwnlei snqtfnivdv kpvnmedltd
      121 qeqkktkldr gklkvve
//
LOCUS       XP_016707936             131 aa            linear   PLN 06-AUG-2024
DEFINITION  oxysterol-binding protein-related protein 3A isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016707936
VERSION     XP_016707936.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852447.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="oxysterol-binding protein-related protein 3A
                     isoform X4"
                     /calculated_mol_wt=14929
     Region          <11..79
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     Region          <79..>128
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     CDS             1..131
                     /gene="LOC107922416"
                     /coded_by="XM_016852447.2:328..723"
                     /db_xref="GeneID:107922416"
ORIGIN      
        1 msyqpcdser ellpstelke ewklanapkn dkfqythfvh kinsfdtapn kllasdshlr
       61 pdryaleqgd lskagfekss dgetfisadd lrinlwnlei snqtfnivdv kpvnmedltg
      121 ynisrfspyp l
//
LOCUS       XP_040942379             315 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942379
VERSION     XP_040942379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086445.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=34198
     Region          3..313
                     /region_name="DUF4057"
                     /note="Protein of unknown function (DUF4057); pfam13266"
                     /db_xref="CDD:404197"
     CDS             1..315
                     /gene="LOC107922482"
                     /coded_by="XM_041086445.1:239..1186"
                     /db_xref="GeneID:107922482"
ORIGIN      
        1 merstpvrkp htstadlltw setpqpdssa saarptrphq vllkkklfwy visvfftdfl
       61 nqwqpsdgir kvvfggqvtd eefenlnkrk pcsgykmkem tgsgifaang eddeselgsa
      121 nptpnsktgl rmyqqalagi shisfaeees ifpkkpttlp evakqrelsg tldsedaklk
      181 kqlcdakckd lsghdifapp peilprpttv ralalkdnfd mgepdtcnpa gsglpseeas
      241 vktakkihnq kfaelsgndi fkgdvppgsa ekplsaaklr emsgsnifad gkvesrdyfg
      301 gvrkppgges sialv
//
LOCUS       XP_016708036             291 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708036
VERSION     XP_016708036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..291
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=31152
     Region          3..289
                     /region_name="DUF4057"
                     /note="Protein of unknown function (DUF4057); pfam13266"
                     /db_xref="CDD:404197"
     CDS             1..291
                     /gene="LOC107922482"
                     /coded_by="XM_016852547.2:252..1127"
                     /db_xref="GeneID:107922482"
ORIGIN      
        1 merstpvrkp htstadlltw setpqpdssa saarptrphq psdgirkvvf ggqvtdeefe
       61 nlnkrkpcsg ykmkemtgsg ifaangedde selgsanptp nsktglrmyq qalagishis
      121 faeeesifpk kpttlpevak qrelsgtlds edaklkkqlc dakckdlsgh difapppeil
      181 prpttvrala lkdnfdmgep dtcnpagsgl pseeasvkta kkihnqkfae lsgndifkgd
      241 vppgsaekpl saaklremsg snifadgkve srdyfggvrk ppggessial v
//
LOCUS       XP_040942380            1240 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942380
VERSION     XP_040942380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086446.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1240
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=136336
     Region          307..>351
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Site            order(317,319,321,328,330,339,342,346)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     CDS             1..1240
                     /gene="LOC107921958"
                     /coded_by="XM_041086446.1:100..3822"
                     /db_xref="GeneID:107921958"
ORIGIN      
        1 masatvdhrn hlhiesipvv dlrllsqpdl lslalcsssp spsnaetelf tpkidrsvfn
       61 esagsrkqtf frlrfaaprs hlhhqhsspp sepfpsrsly lnpesldees snalsllksl
      121 fniddslpan peadepyddk dlvpvqieyp ngnsglqnip vdivssslrk rkrgrprrdg
      181 kdnwliesep laieeykemk tfdrpnetad agnssscneg krrrgrprre esqsrviase
      241 ekkveseiek aafvnveail gieeelrrrt egivtevqll efmkglegew asksqkkrii
      301 daagfgnvlp kgwklmlfvk kraghcwlac sryispngqq fvsckevssy llsfgglkgs
      361 svetlshadn gidlgvkptp gnlpitcrss enetrapllk igsprevqra etikchkctm
      421 tfnlqddfic hllsshkgsa mssghgtpan eevkikngky ecqfchqlfe erncysshlg
      481 ihmennmkkv egsvgeqntv qplnsagsne igpgfrcses nenalvetft dkynhegsll
      541 sndeqdkvnm nekvladrnc dtkskfcfvt dnkgditdat aaadlnvclg senilftsdk
      601 egisrpsdki dvgfavnsme ekkremasnt sflapnakgn mftdentedg hfpsflkgme
      661 vdlkdkatrd dpkagcadts telsnvridt vqgnysegcs lipsgnkqrv nlvdhlkgas
      721 vttdstherg sgcglnsskg dqtcvinnsl ilvsgtlddp esimvnesan idpticfqsh
      781 lpmkkpsqek setvlltshg reqifpsdnn afkafsrtve vseldgaqny rglspgvnsr
      841 nsgvdpnila sfkhektkdr lfgpssykkt htctpeykqd kgsesilyqq ygnqqnsnye
      901 tsmnkvsfft keepkhkggs sivgnayarv gafaltgtvq escsphfsgn rekisgknnv
      961 pgissgavle pkqnkgafed ffglssseqt hvannlnmvh agtahdgsrl qdfqnarnne
     1021 imigysnhar piedsmtglt wksnegnvll sgladtssql ltssgyyptf dwmshkgete
     1081 mfdisgkcss iagfeglqsg siehmeynfl taqpsscsgn skgqsemfni sgkcsnesgl
     1141 sdnlehmeys fmtaqpssrs gnskvpsygs emalkfdsvw lgkdalpllp kiagrhqvtt
     1201 lcswcgnqfy neavdiaaqr stmvmcancr arfsrnhdfm
//
LOCUS       XP_040942381            1240 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942381
VERSION     XP_040942381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086447.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1240
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=136336
     Region          307..>351
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Site            order(317,319,321,328,330,339,342,346)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     CDS             1..1240
                     /gene="LOC107921958"
                     /coded_by="XM_041086447.1:100..3822"
                     /db_xref="GeneID:107921958"
ORIGIN      
        1 masatvdhrn hlhiesipvv dlrllsqpdl lslalcsssp spsnaetelf tpkidrsvfn
       61 esagsrkqtf frlrfaaprs hlhhqhsspp sepfpsrsly lnpesldees snalsllksl
      121 fniddslpan peadepyddk dlvpvqieyp ngnsglqnip vdivssslrk rkrgrprrdg
      181 kdnwliesep laieeykemk tfdrpnetad agnssscneg krrrgrprre esqsrviase
      241 ekkveseiek aafvnveail gieeelrrrt egivtevqll efmkglegew asksqkkrii
      301 daagfgnvlp kgwklmlfvk kraghcwlac sryispngqq fvsckevssy llsfgglkgs
      361 svetlshadn gidlgvkptp gnlpitcrss enetrapllk igsprevqra etikchkctm
      421 tfnlqddfic hllsshkgsa mssghgtpan eevkikngky ecqfchqlfe erncysshlg
      481 ihmennmkkv egsvgeqntv qplnsagsne igpgfrcses nenalvetft dkynhegsll
      541 sndeqdkvnm nekvladrnc dtkskfcfvt dnkgditdat aaadlnvclg senilftsdk
      601 egisrpsdki dvgfavnsme ekkremasnt sflapnakgn mftdentedg hfpsflkgme
      661 vdlkdkatrd dpkagcadts telsnvridt vqgnysegcs lipsgnkqrv nlvdhlkgas
      721 vttdstherg sgcglnsskg dqtcvinnsl ilvsgtlddp esimvnesan idpticfqsh
      781 lpmkkpsqek setvlltshg reqifpsdnn afkafsrtve vseldgaqny rglspgvnsr
      841 nsgvdpnila sfkhektkdr lfgpssykkt htctpeykqd kgsesilyqq ygnqqnsnye
      901 tsmnkvsfft keepkhkggs sivgnayarv gafaltgtvq escsphfsgn rekisgknnv
      961 pgissgavle pkqnkgafed ffglssseqt hvannlnmvh agtahdgsrl qdfqnarnne
     1021 imigysnhar piedsmtglt wksnegnvll sgladtssql ltssgyyptf dwmshkgete
     1081 mfdisgkcss iagfeglqsg siehmeynfl taqpsscsgn skgqsemfni sgkcsnesgl
     1141 sdnlehmeys fmtaqpssrs gnskvpsygs emalkfdsvw lgkdalpllp kiagrhqvtt
     1201 lcswcgnqfy neavdiaaqr stmvmcancr arfsrnhdfm
//
LOCUS       XP_016707240            1214 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707240
VERSION     XP_016707240.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851751.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707240.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1214
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=133531
     Region          307..>351
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Site            order(317,319,321,328,330,339,342,346)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     CDS             1..1214
                     /gene="LOC107921958"
                     /coded_by="XM_016851751.2:100..3744"
                     /db_xref="GeneID:107921958"
ORIGIN      
        1 masatvdhrn hlhiesipvv dlrllsqpdl lslalcsssp spsnaetelf tpkidrsvfn
       61 esagsrkqtf frlrfaaprs hlhhqhsspp sepfpsrsly lnpesldees snalsllksl
      121 fniddslpan peadepyddk dlvpvqieyp ngnsglqnip vdivssslrk rkrgrprrdg
      181 kdnwliesep laieeykemk tfdrpnetad agnssscneg krrrgrprre esqsrviase
      241 ekkveseiek aafvnveail gieeelrrrt egivtevqll efmkglegew asksqkkrii
      301 daagfgnvlp kgwklmlfvk kraghcwlac sryispngqq fvsckevssy llsfgglkgs
      361 svetlshadn gidlgvkptp gnlpitcrss enetrapllk igsprevqra etikchkctm
      421 tfnlqddfic hllsshkgsa mssghgtpan eevkikngky ecqfchqlfe erncysshlg
      481 ihmennmkkv egsvgeqntv qplnsagsne igpgfrcses nenalvetft dkynhegsll
      541 sndeqdkvnm nekvladrnc dtkskfcfvt dnkgditdat aaadlnvclg senilftsdk
      601 egisrpsdki dvgfavnsme ekkremasnt sflapnakgn mftdentedg hfpsflkgme
      661 vdlkdkatrd dpkagcadts telsnvridt vqgnysegcs lipsgnkqrv nlvdhlkgas
      721 vttdstherg sgcglnsskg dqtcvinnsl ilvsgtlddp esimvnesan idpticfqsh
      781 lpmkkpsqek setvlltshg reqifpsdnn afkafsrtve vseldgaqny rglspgvnsr
      841 nsgvdpnila sfkhektkdr lfgpssykkt htctpeykqd kgsesilyqq ygnqqnsnye
      901 tsmnkvsfft keepkhkggs sivgnayarv gafaltgtvq escsphfsgn rekisgknnv
      961 pgissgavle pkqnkgtahd gsrlqdfqna rnneimigys nharpiedsm tgltwksneg
     1021 nvllsgladt ssqlltssgy yptfdwmshk getemfdisg kcssiagfeg lqsgsiehme
     1081 ynfltaqpss csgnskgqse mfnisgkcsn esglsdnleh meysfmtaqp ssrsgnskvp
     1141 sygsemalkf dsvwlgkdal pllpkiagrh qvttlcswcg nqfyneavdi aaqrstmvmc
     1201 ancrarfsrn hdfm
//
LOCUS       XP_016707242             281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707242
VERSION     XP_016707242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..281
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=32212
     Region          25..210
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..281
                     /gene="LOC107921960"
                     /coded_by="XM_016851753.2:467..1312"
                     /db_xref="GeneID:107921960"
ORIGIN      
        1 msnlgddfsq fdiskeekdk lvaevvryil fkthqnsgcp ikreelsqlv tknyrhrslp
       61 ayiineakvk lstifgyelr elqrsrpsst shsrlsqqsg vdaksyviis qlpaevykky
      121 vedvntshlt gftfvaisiv qlaggkiaed nlwlhlkrmg lhetdenhpv lgnvkqvlet
      181 lvqqrylqkd kvsgpegttl fyelaerald gtvserikqy isqqcflwfw escmniilll
      241 elshiigslr tcvyfysgpw tfiyskptil gkqvtydcke r
//
LOCUS       XP_016707243             276 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707243
VERSION     XP_016707243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..276
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=31713
     Region          25..205
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..276
                     /gene="LOC107921960"
                     /coded_by="XM_016851754.2:209..1039"
                     /db_xref="GeneID:107921960"
ORIGIN      
        1 msnlgddfsq fdiskeekdk lvaevvryil fkthqnsgcp ikreelsqlv tknyrhrslp
       61 ayiineakvk lstifgyelr elqrsrpsst shsrlsqqsg vdaksyviis qlpaevykky
      121 vedvntshlt gftfvaisiv qlagdnlwlh lkrmglhetd enhpvlgnvk qvletlvqqr
      181 ylqkdkvsgp egttlfyela eraldgtvse rikqyisqqc flwfwescmn iilllelshi
      241 igslrtcvyf ysgpwtfiys kptilgkqvt ydcker
//
LOCUS       XP_016707245             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707245
VERSION     XP_016707245.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851756.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=26598
     Region          25..210
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..235
                     /gene="LOC107921960"
                     /coded_by="XM_016851756.2:199..906"
                     /db_xref="GeneID:107921960"
ORIGIN      
        1 msnlgddfsq fdiskeekdk lvaevvryil fkthqnsgcp ikreelsqlv tknyrhrslp
       61 ayiineakvk lstifgyelr elqrsrpsst shsrlsqqsg vdaksyviis qlpaevykky
      121 vedvntshlt gftfvaisiv qlaggkiaed nlwlhlkrmg lhetdenhpv lgnvkqvlet
      181 lvqqrylqkd kvsgpegttl fyelaerald gtvserikqy isqivkkdda tvdil
//
LOCUS       XP_016707244             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707244
VERSION     XP_016707244.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851755.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=26598
     Region          25..210
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..235
                     /gene="LOC107921960"
                     /coded_by="XM_016851755.2:466..1173"
                     /db_xref="GeneID:107921960"
ORIGIN      
        1 msnlgddfsq fdiskeekdk lvaevvryil fkthqnsgcp ikreelsqlv tknyrhrslp
       61 ayiineakvk lstifgyelr elqrsrpsst shsrlsqqsg vdaksyviis qlpaevykky
      121 vedvntshlt gftfvaisiv qlaggkiaed nlwlhlkrmg lhetdenhpv lgnvkqvlet
      181 lvqqrylqkd kvsgpegttl fyelaerald gtvserikqy isqivkkdda tvdil
//
LOCUS       XP_040942382             230 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942382
VERSION     XP_040942382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086448.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=26100
     Region          25..205
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..230
                     /gene="LOC107921960"
                     /coded_by="XM_041086448.1:204..896"
                     /db_xref="GeneID:107921960"
ORIGIN      
        1 msnlgddfsq fdiskeekdk lvaevvryil fkthqnsgcp ikreelsqlv tknyrhrslp
       61 ayiineakvk lstifgyelr elqrsrpsst shsrlsqqsg vdaksyviis qlpaevykky
      121 vedvntshlt gftfvaisiv qlagdnlwlh lkrmglhetd enhpvlgnvk qvletlvqqr
      181 ylqkdkvsgp egttlfyela eraldgtvse rikqyisqiv kkddatvdil
//
LOCUS       XP_016707576             989 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g78280 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707576
VERSION     XP_016707576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..989
                     /product="F-box protein At1g78280 isoform X1"
                     /calculated_mol_wt=113133
     Region          23..67
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          143..365
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     Region          <776..914
                     /region_name="APH"
                     /note="Phosphotransferase enzyme family; pfam01636"
                     /db_xref="CDD:426359"
     CDS             1..989
                     /gene="LOC107922198"
                     /coded_by="XM_016852087.2:401..3370"
                     /db_xref="GeneID:107922198"
ORIGIN      
        1 menshesqsl hfkdrrvdal gnfnllpdel icaildyltp rdiarlacvs svmyifcnee
       61 plwmslclkk vngplpykgs wkkttlhlen lpnkyidycr kplqfdgfhs fflykrlyrc
      121 httldgfsfd dgnverqnvl skeqfdreyd rkkpvlltgl aecwpartnw tidklllkyg
      181 dtafkisqrt agkismkfkd yvsymneqhd edplyifdhk fgesapglle dynvpqifqe
      241 dffdvldrds rppfrwliig persgaswhv dpaltsawnt llcgrkrwal yppgrvpfgv
      301 tvhvndedgd vnidtpsslq wwldyyplla dedkpiectq lpgetifvps gwwhcvlnle
      361 ttvavtqnfv nprnfefvcl dmapgfqhkg vcrvgllavd ggclvnmekn mscdkdnfnn
      421 sdltrkekrv kilrsqesen heetanaasr rynlwkhgfs ydinyltmfl drekdhytsp
      481 wssgncigpr emrewlsrlw vgkprmreli wkgaclaina dkwleclgki csfhnlpfpn
      541 ddeklpvgtg snpvyvmdey vvkifveggl easilglgte lefyntlcev dsplknyipt
      601 vlasgilhle ngsfeidswd gkkvpdvlak cnlipetgkg dvfpfgiqsk klfeyrkagl
      661 pesgpdssag snsiwpylit krckgkiyae lrdelswedv lnlasflgeq lqnlhslphp
      721 slgnsslsvv eqkkefsfan gmdidvacne ldihipaewe ifvrtlsqkk kdvssrlnkw
      781 gvpvpeklme kidgylpddf lkllfiseqn gmkralkpls wihsdimddn vylepcctfg
      841 sneiaaltdn gsvnghnngg evkswrpnyi idfsdlsigd plydvipihl dvfrgnssll
      901 kqflqcyklp lmqktpenrs itandkfrrl syqamcycil hdenvlgaif slwtelqtae
      961 tweeveqmvw gelnnyqgva chvtptpnl
//
LOCUS       XP_016707577             952 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g78280 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707577
VERSION     XP_016707577.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852088.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..952
                     /product="F-box protein At1g78280 isoform X2"
                     /calculated_mol_wt=108851
     Region          23..>51
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          106..328
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     Region          <739..877
                     /region_name="APH"
                     /note="Phosphotransferase enzyme family; pfam01636"
                     /db_xref="CDD:426359"
     CDS             1..952
                     /gene="LOC107922198"
                     /coded_by="XM_016852088.2:398..3256"
                     /db_xref="GeneID:107922198"
ORIGIN      
        1 menshesqsl hfkdrrvdal gnfnllpdel icaildyltp rdiarlacvs renlpnkyid
       61 ycrkplqfdg fhsfflykrl yrchttldgf sfddgnverq nvlskeqfdr eydrkkpvll
      121 tglaecwpar tnwtidklll kygdtafkis qrtagkismk fkdyvsymne qhdedplyif
      181 dhkfgesapg lledynvpqi fqedffdvld rdsrppfrwl iigpersgas whvdpaltsa
      241 wntllcgrkr walyppgrvp fgvtvhvnde dgdvnidtps slqwwldyyp lladedkpie
      301 ctqlpgetif vpsgwwhcvl nlettvavtq nfvnprnfef vcldmapgfq hkgvcrvgll
      361 avdggclvnm eknmscdkdn fnnsdltrke krvkilrsqe senheetana asrrynlwkh
      421 gfsydinylt mfldrekdhy tspwssgnci gpremrewls rlwvgkprmr eliwkgacla
      481 inadkwlecl gkicsfhnlp fpnddeklpv gtgsnpvyvm deyvvkifve ggleasilgl
      541 gtelefyntl cevdsplkny iptvlasgil hlengsfeid swdgkkvpdv lakcnlipet
      601 gkgdvfpfgi qskklfeyrk aglpesgpds sagsnsiwpy litkrckgki yaelrdelsw
      661 edvlnlasfl geqlqnlhsl phpslgnssl svveqkkefs fangmdidva cneldihipa
      721 eweifvrtls qkkkdvssrl nkwgvpvpek lmekidgylp ddflkllfis eqngmkralk
      781 plswihsdim ddnvylepcc tfgsneiaal tdngsvnghn nggevkswrp nyiidfsdls
      841 igdplydvip ihldvfrgns sllkqflqcy klplmqktpe nrsitandkf rrlsyqamcy
      901 cilhdenvlg aifslwtelq taetweeveq mvwgelnnyq gvachvtptp nl
//
LOCUS       XP_016708250             269 aa            linear   PLN 06-AUG-2024
DEFINITION  14-3-3-like protein [Gossypium hirsutum].
ACCESSION   XP_016708250
VERSION     XP_016708250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852761.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="14-3-3-like protein"
                     /calculated_mol_wt=30264
     Region          9..245
                     /region_name="14-3-3"
                     /note="14-3-3 domain; cl02098"
                     /db_xref="CDD:470464"
     Site            order(15,18..19,21..22,24,27,66,69,73,88,92,95..96,99)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206755"
     Site            order(57,64,130,137..138,179,182..183,186,189..190,227,
                     230,233..234)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206755"
     CDS             1..269
                     /gene="LOC107922638"
                     /coded_by="XM_016852761.2:244..1053"
                     /db_xref="GeneID:107922638"
ORIGIN      
        1 maastpssre efvymaklae qaerydemve fmekasasae seelsveern llsvayknvi
       61 garraswriv ssieqkeesr gnedhvtlir dyrakiesel ssicggilkl ldsrlipsaa
      121 akdskvfylk mkgdyhryla efktgaerke aaestltayk saqdianael apthpirlgl
      181 alnfsvfyye ilnspdracn lakqafdeai aeldtlgees ykdstlimql lrdnltlwts
      241 dlqddgtdei keapkqeeeq qkqpeqpkq
//
LOCUS       XP_016729026              85 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome regulatory subunit 8 homolog B isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016729026
VERSION     XP_016729026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873537.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..85
                     /product="26S proteasome regulatory subunit 8 homolog B
                     isoform X1"
                     /calculated_mol_wt=9769
     Region          <2..79
                     /region_name="PRK03992"
                     /note="proteasome-activating nucleotidase; Provisional"
                     /db_xref="CDD:179699"
     CDS             1..85
                     /gene="LOC107940107"
                     /coded_by="XM_016873537.2:108..365"
                     /db_xref="GeneID:107940107"
ORIGIN      
        1 mqsrfdilki hsrrmnlmrg idlkkiaekm ngasgaelka vctesgmfal rerrvhvtqe
       61 dfemavakvm kkeseknmsl rklwk
//
LOCUS       XP_040942383              79 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942383
VERSION     XP_040942383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086449.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..79
                     /product="glycine--tRNA ligase,
                     chloroplastic/mitochondrial 2 isoform X2"
                     /calculated_mol_wt=8596
     Region          19..>72
                     /region_name="tRNA_synt_2f"
                     /note="Glycyl-tRNA synthetase beta subunit; pfam02092"
                     /db_xref="CDD:460442"
     CDS             1..79
                     /gene="LOC107940107"
                     /coded_by="XM_041086449.1:237..476"
                     /db_xref="GeneID:107940107"
ORIGIN      
        1 maapflstpf qpyvyqisve slcpkqaene levrgppalk afdpkenptk aaegfcrrya
       61 vpldslfrka dgesilipa
//
LOCUS       XP_016707148             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707148
VERSION     XP_016707148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851659.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20822
     CDS             1..189
                     /gene="LOC107921818"
                     /coded_by="XM_016851659.2:15..584"
                     /db_xref="GeneID:107921818"
ORIGIN      
        1 mlrnslanpt phfafyfitv pfraqgrnkd qdpktrsqnl menlrtsskd grrlkpnegc
       61 erhpkhkqsp gvcslclaqk lshlssthfs tlassssssi ssscsssscs sspfhpyrfi
      121 adskgtsfsf llfngknlft ksksvawpsr miskegddhk kkkggflskl lhpkntktkg
      181 rcssmavfv
//
LOCUS       XP_016706708             361 aa            linear   PLN 06-AUG-2024
DEFINITION  queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706708
VERSION     XP_016706708.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851219.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706708.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..361
                     /product="queuine tRNA-ribosyltransferase catalytic
                     subunit 1 isoform X1"
                     /calculated_mol_wt=40015
     Region          2..315
                     /region_name="TGT"
                     /note="Queuine tRNA-ribosyltransferase; pfam01702"
                     /db_xref="CDD:460299"
     CDS             1..361
                     /gene="LOC107921348"
                     /coded_by="XM_016851219.2:16..1101"
                     /db_xref="GeneID:107921348"
ORIGIN      
        1 magtikglat yqleeigcqi ilgntyhlal rptselidel gglhkfmnwp ralltdsggf
       61 qmspvdgkpm lltpeesiqi qnrigadiim alddvvktti tgprieeamy rtlrwidrci
      121 aahkrphdqn lfgivqggld pvlrdicvrg lvdrnlpgya igglaggedk dsfwrvvaqc
      181 tatlpedkpr yvmgvgypld ivvcsalgad mydcvyptrt arfgtalvpe gvlklkhram
      241 aedtrpidpt cacmvcknyt rayihslvtk damgsqllsf hnlyymmqls knlhssivqg
      301 kfpefvcnfl qkmfpkgdip ewvcnameva eidissccap fryiqatkvq snlnedeiqa
      361 v
//
LOCUS       XP_040942384             299 aa            linear   PLN 06-AUG-2024
DEFINITION  queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942384
VERSION     XP_040942384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086450.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..299
                     /product="queuine tRNA-ribosyltransferase catalytic
                     subunit 1 isoform X2"
                     /calculated_mol_wt=33240
     Region          <23..253
                     /region_name="TGT"
                     /note="Queuine tRNA-ribosyltransferase; pfam01702"
                     /db_xref="CDD:460299"
     CDS             1..299
                     /gene="LOC107921348"
                     /coded_by="XM_041086450.1:735..1634"
                     /db_xref="GeneID:107921348"
ORIGIN      
        1 mflnlvssgw kanapntrgi ysnpniimal ddvvkttitg prieeamyrt lrwidrciaa
       61 hkrphdqnlf givqggldpv lrdicvrglv drnlpgyaig glaggedkds fwrvvaqcta
      121 tlpedkpryv mgvgypldiv vcsalgadmy dcvyptrtar fgtalvpegv lklkhramae
      181 dtrpidptca cmvcknytra yihslvtkda mgsqllsfhn lyymmqlskn lhssivqgkf
      241 pefvcnflqk mfpkgdipew vcnamevaei dissccapfr yiqatkvqsn lnedeiqav
//
LOCUS       XP_040942385             145 aa            linear   PLN 06-AUG-2024
DEFINITION  classical arabinogalactan protein 4 [Gossypium hirsutum].
ACCESSION   XP_040942385
VERSION     XP_040942385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086451.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="classical arabinogalactan protein 4"
                     /calculated_mol_wt=13517
     CDS             1..145
                     /gene="LOC121213631"
                     /coded_by="XM_041086451.1:252..689"
                     /db_xref="GeneID:121213631"
ORIGIN      
        1 maktfacfvl lalivscalg qapssaptks ppssnptpap kvsptmsptt tptasppsts
       61 tppssapess ptsspttspp appagspags pagspagspa savsptnsis dtpgssptsp
      121 tsaaalnrvt vagsavavvf aalli
//
LOCUS       XP_016706479             290 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa ribonucleoprotein, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706479
VERSION     XP_016706479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850990.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="28 kDa ribonucleoprotein, chloroplastic"
                     /calculated_mol_wt=32327
     Region          94..161
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     Region          183..260
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     CDS             1..290
                     /gene="LOC107921121"
                     /coded_by="XM_016850990.2:213..1085"
                     /db_xref="GeneID:107921121"
ORIGIN      
        1 mallrlphqf slfplqhkpq sisnnfssip nisstcflpp lspltttlrf katpftsfil
       61 hfsattqdpa leakqeeeee eeeefsktrl iaqnvpwsct vedirslfek ygtvvdvels
      121 mhnktrnrgl afvsmaspee alaalnnles yelegrtlrl nyakankkka appekpksvp
      181 afnlfvanls yevrakhlke ffsseganvv saevifhdsp rkssgygfvs fkskkeadaa
      241 msafqgkmfm grpirvqrsr qfvkvqsddg slannkstes nnnskeaamd
//
LOCUS       XP_016706713             358 aa            linear   PLN 06-AUG-2024
DEFINITION  purine permease 3 [Gossypium hirsutum].
ACCESSION   XP_016706713
VERSION     XP_016706713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..358
                     /product="purine permease 3"
                     /calculated_mol_wt=39528
     Region          18..338
                     /region_name="PUNUT"
                     /note="Purine nucleobase transmembrane transport;
                     pfam16913"
                     /db_xref="CDD:293518"
     CDS             1..358
                     /gene="LOC107921354"
                     /coded_by="XM_016851224.2:92..1168"
                     /db_xref="GeneID:107921354"
ORIGIN      
        1 mevvkesepn tttmrkallv inciilsign cagplmmrly fihggkrvwf sswletggwp
       61 iilfpiacah fyrsrtqpss enklffmkph lfiaaavigi ltglddylya ygvarlpvst
      121 ssliiasqla ftagfafvlv kqkftsysin avflltigsg vlamhtssdr panesnreyv
      181 lgflmtvgas alygfilplv eltykkakqe isyalvmeiq mvmclfatgv ctigmlvnnd
      241 fkvipreare yelgetkyyi vaicsamiwq cfflgaigvi fcassllsgi iiavllpvte
      301 ilavifynes fhaekgvala lslwgflsyf ygeikqsken kpaletemas vpnrqesv
//
LOCUS       XP_016706714             348 aa            linear   PLN 06-AUG-2024
DEFINITION  purine permease 3 [Gossypium hirsutum].
ACCESSION   XP_016706714
VERSION     XP_016706714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..348
                     /product="purine permease 3"
                     /calculated_mol_wt=38283
     Region          4..325
                     /region_name="PUNUT"
                     /note="Purine nucleobase transmembrane transport;
                     pfam16913"
                     /db_xref="CDD:293518"
     CDS             1..348
                     /gene="LOC107921356"
                     /coded_by="XM_016851225.2:259..1305"
                     /db_xref="GeneID:107921356"
ORIGIN      
        1 mgklllvinc filaighcgg plmmrlyfih ggkrvwfssw letggwpiil fpiacaylhr
       61 sriqpsaenk lflmkprlfi aaavigiltg vddyiyaygv arlpvstval iiasqlvfta
      121 vfafvlvkqk ftsysinavf lltmgagvlg lntssdrpkn esyreyilgf vmtvgaaaly
      181 gfilplvelt yrkakqeisy glvleiqavm clfatafsti gmlvnndfkv ipkearefvl
      241 getkyytiai msaivwqcfy lgvigiifcs sslvsgivia vllpvteila vifykesfha
      301 ekgvalalsl wgflsyfcge ikqskinkpa lhllqsemps vpncqisv
//
LOCUS       XP_016708251             225 aa            linear   PLN 06-AUG-2024
DEFINITION  unconventional myosin-Ic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708251
VERSION     XP_016708251.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852762.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708251.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="unconventional myosin-Ic isoform X1"
                     /calculated_mol_wt=25710
     Region          <120..>201
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..225
                     /gene="LOC107922639"
                     /coded_by="XM_016852762.2:68..745"
                     /db_xref="GeneID:107922639"
ORIGIN      
        1 mkkrrgkwrh qrrfsrkplq styqfliiil iifqkrelvf enpkqkeeie vrcaiasapp
       61 pamkfnianl smgcrkklei vddqklstqy liiiarglqm wnlfstawpc sntffyahrc
      121 dvnlllatlc trtiqtcegs ivkaldcnav vasrdaltkt vyarlfdwlv dkinisvgkd
      181 pnshvqigvl diygfecfkh nrwglentik gktsdmvips qpvas
//
LOCUS       XP_016708253             225 aa            linear   PLN 06-AUG-2024
DEFINITION  unconventional myosin-Ic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708253
VERSION     XP_016708253.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708253.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="unconventional myosin-Ic isoform X1"
                     /calculated_mol_wt=25710
     Region          <120..>201
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..225
                     /gene="LOC107922639"
                     /coded_by="XM_016852764.2:18..695"
                     /db_xref="GeneID:107922639"
ORIGIN      
        1 mkkrrgkwrh qrrfsrkplq styqfliiil iifqkrelvf enpkqkeeie vrcaiasapp
       61 pamkfnianl smgcrkklei vddqklstqy liiiarglqm wnlfstawpc sntffyahrc
      121 dvnlllatlc trtiqtcegs ivkaldcnav vasrdaltkt vyarlfdwlv dkinisvgkd
      181 pnshvqigvl diygfecfkh nrwglentik gktsdmvips qpvas
//
LOCUS       XP_040942386             207 aa            linear   PLN 06-AUG-2024
DEFINITION  unconventional myosin-Ic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942386
VERSION     XP_040942386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086452.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="unconventional myosin-Ic isoform X2"
                     /calculated_mol_wt=23153
     Region          <102..>183
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..207
                     /gene="LOC107922639"
                     /coded_by="XM_041086452.1:66..689"
                     /db_xref="GeneID:107922639"
ORIGIN      
        1 meapktiqqk tspiylprel vfenpkqkee ievrcaiasa pppamkfnia nlsmgcrkkl
       61 eivddqklst qyliiiargl qmwnlfstaw pcsntffyah rcdvnlllat lctrtiqtce
      121 gsivkaldcn avvasrdalt ktvyarlfdw lvdkinisvg kdpnshvqig vldiygfecf
      181 khnrwglent ikgktsdmvi psqpvas
//
LOCUS       XP_040942387             167 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942387
VERSION     XP_040942387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086453.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=19245
     Region          <120..>167
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..167
                     /gene="LOC107922639"
                     /coded_by="XM_041086453.1:68..571"
                     /db_xref="GeneID:107922639"
ORIGIN      
        1 mkkrrgkwrh qrrfsrkplq styqfliiil iifqkrelvf enpkqkeeie vrcaiasapp
       61 pamkfnianl smgcrkklei vddqklstqy liiiarglqm wnlfstawpc sntffyahrc
      121 dvnlllatlc trtiqtcegs ivkaldcnav vasrdaltkt vyarlfd
//
LOCUS       XP_040942388             167 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942388
VERSION     XP_040942388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086454.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=19245
     Region          <120..>167
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..167
                     /gene="LOC107922639"
                     /coded_by="XM_041086454.1:33..536"
                     /db_xref="GeneID:107922639"
ORIGIN      
        1 mkkrrgkwrh qrrfsrkplq styqfliiil iifqkrelvf enpkqkeeie vrcaiasapp
       61 pamkfnianl smgcrkklei vddqklstqy liiiarglqm wnlfstawpc sntffyahrc
      121 dvnlllatlc trtiqtcegs ivkaldcnav vasrdaltkt vyarlfd
//
LOCUS       XP_016706738             668 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component EXO70B1 [Gossypium hirsutum].
ACCESSION   XP_016706738
VERSION     XP_016706738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..668
                     /product="exocyst complex component EXO70B1"
                     /calculated_mol_wt=76810
     Region          284..651
                     /region_name="Exo70"
                     /note="Exo70 exocyst complex subunit; pfam03081"
                     /db_xref="CDD:460798"
     CDS             1..668
                     /gene="LOC107921391"
                     /coded_by="XM_016851249.2:245..2251"
                     /db_xref="GeneID:107921391"
ORIGIN      
        1 mnkrlnseka gsfprfgrrr skreletgsf klkglnpkvc gknqnpvelf wksdlnhdqi
       61 lekvvqfiek lasgqdkska peipnfvesf lkmvesriat yeqseasakl gfneeytsff
      121 eavsclskiv ntldefpfds attscfnrag svhhramlls eyqflalldi skrncnvtvd
      181 sktpktpkqs ffnsnqetdr cvkpeydsgt givfpyfppq svanmnqval amisagyeee
      241 cfivysglrl kaldfefsnq gyenvnmedf qsmdwesleg eidnwihivk ycttnlfsve
      301 rklcnsvfpe hsliaqklfc dlatsltirl lnfpnaivli kqysaeklfk fldiyetlrd
      361 ltssldsels aldlisetse tqrrvgvaav tifcqlensi ksdngripva sgavhpltry
      421 tmnylkyace ykdtlervfq qhyetegstr rkvqkqeskn avedndripk tshfsvklmm
      481 vmdlldakie mkskfyrdpa lryiflmnng ryilqkikgs tdideimgps wsgkrtsdlr
      541 qyhknyqret wrkvlqclnh eglqtngkvs kailkgrfkn fntlfdeihk tqsiwmvsde
      601 qlkselrvsi savvipayrs flgrfkphfd sgkkaekyik yqpediegli dklfegnmts
      661 mgrrrhnn
//
LOCUS       XP_040942389            1001 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Gossypium
            hirsutum].
ACCESSION   XP_040942389
VERSION     XP_040942389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086455.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1001
                     /product="protein BREAST CANCER SUSCEPTIBILITY 1 homolog"
                     /calculated_mol_wt=110712
     Region          10..63
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Region          <14..156
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Site            order(16,19,31,33,36,39,50,53)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          <647..725
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(678,688..691,697,720)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          778..857
                     /region_name="BRCT_Bard1_rpt1"
                     /note="first BRCT domain of BRCA1-associated RING domain
                     protein 1 (Bard1) and similar proteins; cd17734"
                     /db_xref="CDD:349366"
     Region          889..992
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..1001
                     /gene="LOC107920972"
                     /coded_by="XM_041086455.1:45..3050"
                     /db_xref="GeneID:107920972"
ORIGIN      
        1 mgdpshlekm grelkcpicl sllnsavslt cnhvfcnvci lksmksgsdc pvckvpcrrr
       61 evrpaphmdn lvsiyksmev asgfnifvtq dapldtsads gkrvkndlnc cermdnqgan
      121 kgrgsreaks tetsdpisvk psfptnkrvq vpqyplsets mlpekngggl ievtedeskm
      181 ssdilkennl gekgeqilsp ffwlreedve rpsqlsdgdq clyitppglp sfsdmkdsdd
      241 egfskeevhg nrdhlnlfds emfewtqgac spellsspdk mqvadtyepa sqgastaepc
      301 nngtcmitgh daseemlpni eslriqcvss nkirsckske lgkkqrktaq kniadrtssh
      361 isgdhvnlgk gsedfnkkqk ddcssssyla ktrknckvag ldhhvtepma shfsakapkq
      421 edtplaaivg mgkcgdenen lrmvkrcrki taqcqnkscs klkkqklslv kvdtpkevlt
      481 vcgqaneymi qqksslpvpl ahenaaeqfr kglskhtrev klaptlksek nsgckkkikv
      541 yfsddmkswl pedqqqqggn anislervse kvhgrttvgn sessivkklp langvalhkc
      601 etitikiqca fclsmeetea sgemvhyyeg ssvpldyngg skvihshknc tewapnvyfe
      661 ndkainleae lsrsrkikcs ccglkgaalg cyekscrksf hvpcaklvsq crwdvdnfvi
      721 lcplhasskl pneksesqgi rkrrnlrgql lihhneipin devsvqkkwn tcesgnklvl
      781 ccsgltveek eimsefekla gvtvlkrwds iithiiastd engackrtlk ilmgilegkw
      841 ilnikwvkac ikamklvdel kyeitidvhg irdgprlgrl rlqnkqpklf dgckfyimgd
      901 fepfykgdlq dvliaaggti lhrkpisgdp garllgspaf pifiiysvel pvkcdpskkh
      961 milsrrqlna ealasstgak avsnswvlss isackllslg e
//
LOCUS       XP_016706298            1001 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Gossypium
            hirsutum].
ACCESSION   XP_016706298
VERSION     XP_016706298.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850809.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706298.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1001
                     /product="protein BREAST CANCER SUSCEPTIBILITY 1 homolog"
                     /calculated_mol_wt=110712
     Region          10..63
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Region          <14..156
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Site            order(16,19,31,33,36,39,50,53)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          <647..725
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(678,688..691,697,720)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          778..857
                     /region_name="BRCT_Bard1_rpt1"
                     /note="first BRCT domain of BRCA1-associated RING domain
                     protein 1 (Bard1) and similar proteins; cd17734"
                     /db_xref="CDD:349366"
     Region          889..992
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..1001
                     /gene="LOC107920972"
                     /coded_by="XM_016850809.2:144..3149"
                     /db_xref="GeneID:107920972"
ORIGIN      
        1 mgdpshlekm grelkcpicl sllnsavslt cnhvfcnvci lksmksgsdc pvckvpcrrr
       61 evrpaphmdn lvsiyksmev asgfnifvtq dapldtsads gkrvkndlnc cermdnqgan
      121 kgrgsreaks tetsdpisvk psfptnkrvq vpqyplsets mlpekngggl ievtedeskm
      181 ssdilkennl gekgeqilsp ffwlreedve rpsqlsdgdq clyitppglp sfsdmkdsdd
      241 egfskeevhg nrdhlnlfds emfewtqgac spellsspdk mqvadtyepa sqgastaepc
      301 nngtcmitgh daseemlpni eslriqcvss nkirsckske lgkkqrktaq kniadrtssh
      361 isgdhvnlgk gsedfnkkqk ddcssssyla ktrknckvag ldhhvtepma shfsakapkq
      421 edtplaaivg mgkcgdenen lrmvkrcrki taqcqnkscs klkkqklslv kvdtpkevlt
      481 vcgqaneymi qqksslpvpl ahenaaeqfr kglskhtrev klaptlksek nsgckkkikv
      541 yfsddmkswl pedqqqqggn anislervse kvhgrttvgn sessivkklp langvalhkc
      601 etitikiqca fclsmeetea sgemvhyyeg ssvpldyngg skvihshknc tewapnvyfe
      661 ndkainleae lsrsrkikcs ccglkgaalg cyekscrksf hvpcaklvsq crwdvdnfvi
      721 lcplhasskl pneksesqgi rkrrnlrgql lihhneipin devsvqkkwn tcesgnklvl
      781 ccsgltveek eimsefekla gvtvlkrwds iithiiastd engackrtlk ilmgilegkw
      841 ilnikwvkac ikamklvdel kyeitidvhg irdgprlgrl rlqnkqpklf dgckfyimgd
      901 fepfykgdlq dvliaaggti lhrkpisgdp garllgspaf pifiiysvel pvkcdpskkh
      961 milsrrqlna ealasstgak avsnswvlss isackllslg e
//
LOCUS       XP_016707541             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707541
VERSION     XP_016707541.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852052.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707541.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_016852052.2:797..2749"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_016707542             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707542
VERSION     XP_016707542.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852053.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707542.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_016852053.2:679..2631"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_040942390             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942390
VERSION     XP_040942390.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086456.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_041086456.1:459..2411"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_040942391             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942391
VERSION     XP_040942391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086457.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_041086457.1:248..2200"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_016707543             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707543
VERSION     XP_016707543.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707543.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_016852054.2:288..2240"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_040942392             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942392
VERSION     XP_040942392.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086458.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_041086458.1:173..2125"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_016707544             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707544
VERSION     XP_016707544.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852055.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707544.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_016852055.2:138..2090"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_016707545             650 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707545
VERSION     XP_016707545.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852056.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707545.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=73887
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          220..517
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..650
                     /gene="LOC107922166"
                     /coded_by="XM_016852056.2:350..2302"
                     /db_xref="GeneID:107922166"
ORIGIN      
        1 mgcaasrier egrvqvcker kklmkqlvgy rgefadaqla ylralkntgv tlrqftesds
       61 lelentshcl tlppsppspl ppppppsfsp dprkagengi ieaaldestk inqdecstpp
      121 pptassswty wdlfestspl hhpkqsetve piqeeswaes kmqfedenpg eelvegfain
      181 tlperslrre ivddsssims wynkdsidva mlvlknnktl egimkdlddy flkasaggke
      241 iavftdinig nnslpwklne nkrkrsnsak vfsvlswsws skslqlarda fqcrysepcn
      301 pgahcitldk lyvaeqklyk qvkeeevtkl elekklmllq kqdenrdwtk tqkikssven
      361 lendmtrlqh sistacssil elideelypq lvaltsglme mwkmmykshq fqnhiskqln
      421 hltdnlsmdl ttesrlqata qletevsfwy ysfcrliksq qeylrtlcqw iqltdclvsn
      481 qqqshcssav rrlceewhlg feklpdkaas etiksfllai qsiiqqqaee hnqkkksekl
      541 qkrlqkelis ltemekkveg svltldmnst lspkhplslk raktealkkr vdvekgkhln
      601 svqlsktmil nnlktslpnv fqalmgfska cvevfeaihg nsqpkipcas
//
LOCUS       XP_016708205             331 aa            linear   PLN 06-AUG-2024
DEFINITION  J domain-containing protein DDB_G0295729 [Gossypium hirsutum].
ACCESSION   XP_016708205
VERSION     XP_016708205.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852716.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..331
                     /product="J domain-containing protein DDB_G0295729"
                     /calculated_mol_wt=36800
     Region          68..130
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(97..99,107,110..111,114..115)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..331
                     /gene="LOC107922607"
                     /coded_by="XM_016852716.2:263..1258"
                     /db_xref="GeneID:107922607"
ORIGIN      
        1 meengsraea lrllgiaekl lqnrdfngsr efailaqete plldgsdqil avvdvllaae
       61 krinnqhdwy silqidrrse dndlikkqyr rlalllhpdk nkfpsadhaf klvadawavl
      121 sniskkslyd kelglytkid lsspgdrsnq agklpvtrkg qnqeqsqhrp psktqnenqr
      181 srlstfwtac pycyrlfeyp rvyegcclrc qncerafhav liptlpplvp gqeayyccwa
      241 ffplgfvsgs qdgggkqptg ftnwmppmfp gvqqenerng gnvppsappp apappppaap
      301 tsatkvvsgv srgdasdfap rkrgrprknp l
//
LOCUS       XP_040942393             946 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942393
VERSION     XP_040942393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086459.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..946
                     /product="rho GTPase-activating protein REN1 isoform X1"
                     /calculated_mol_wt=104148
     Region          2..>96
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          108..214
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          270..408
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <673..>939
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          708..788
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..946
                     /gene="LOC107920961"
                     /coded_by="XM_041086459.1:308..3148"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmasrkeep spaqlkmaik
       61 kedpsvlqqr maskredrep sqghqgdvaa aaapgsleyq nsrsgntvlk sgplflsskg
      121 igwtswkkrw filthtslvf frsdpnavsq kgnevnltlg gidlnnsgsv ivkadkklit
      181 vqfqdgrdgr tftlkaetld dlfewkaale nalsqapssa namgqngifr ndqseevdas
      241 repandkppv rstvigrpvl laledvdgap tflekalkfi eehgvrvegi lrqaadvedv
      301 krriqeyeqg ktefsseeda hvigdcvkyi lrelpsspvp asccnallea crtqrgsrvn
      361 amrlavldtf pepnrrllqr ilmmmqvvas hknenlmsts avaacmapll lrpllagdce
      421 ietdfdvggd gsmqllqaaa aanhaqaivi tlleeynqif gegsissdly sdseesgses
      481 eeaaeddsep ydedesyedd ecddetegsd vsndndeedg dddddddddd dapsetgses
      541 ghsvtsdvdv dkdsdsssss sessetghdv katkrlsssi hnpssgndgs erskgnqsks
      601 tatltkksae lskgvhgptn vedrlahhaq ipssqqsaaa ahrarrnavw grtsarknls
      661 mesidypfge efeietvede ksdlqnrlre eiegntklea svekrkktlq grqlclekev
      721 ailkeelqre rdkrtalesv lnssqeqptv lpakidektk adlndialae adiiklkkkv
      781 edlemqlnqq lekksaymnd scrqrqpnhh akkedkpkgs gavvkgsgsk qdtyvdkaef
      841 ekgrkqesss enkqpppnqq vdhsenkrnr mneaetdskk shassnpkkl akrgeeqrsq
      901 tanespenek grgssqvvas sdkgkgiehv rtarnrekrr gpdssq
//
LOCUS       XP_040942394             946 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942394
VERSION     XP_040942394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086460.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..946
                     /product="rho GTPase-activating protein REN1 isoform X1"
                     /calculated_mol_wt=104148
     Region          2..>96
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          108..214
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          270..408
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <673..>939
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          708..788
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..946
                     /gene="LOC107920961"
                     /coded_by="XM_041086460.1:215..3055"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmasrkeep spaqlkmaik
       61 kedpsvlqqr maskredrep sqghqgdvaa aaapgsleyq nsrsgntvlk sgplflsskg
      121 igwtswkkrw filthtslvf frsdpnavsq kgnevnltlg gidlnnsgsv ivkadkklit
      181 vqfqdgrdgr tftlkaetld dlfewkaale nalsqapssa namgqngifr ndqseevdas
      241 repandkppv rstvigrpvl laledvdgap tflekalkfi eehgvrvegi lrqaadvedv
      301 krriqeyeqg ktefsseeda hvigdcvkyi lrelpsspvp asccnallea crtqrgsrvn
      361 amrlavldtf pepnrrllqr ilmmmqvvas hknenlmsts avaacmapll lrpllagdce
      421 ietdfdvggd gsmqllqaaa aanhaqaivi tlleeynqif gegsissdly sdseesgses
      481 eeaaeddsep ydedesyedd ecddetegsd vsndndeedg dddddddddd dapsetgses
      541 ghsvtsdvdv dkdsdsssss sessetghdv katkrlsssi hnpssgndgs erskgnqsks
      601 tatltkksae lskgvhgptn vedrlahhaq ipssqqsaaa ahrarrnavw grtsarknls
      661 mesidypfge efeietvede ksdlqnrlre eiegntklea svekrkktlq grqlclekev
      721 ailkeelqre rdkrtalesv lnssqeqptv lpakidektk adlndialae adiiklkkkv
      781 edlemqlnqq lekksaymnd scrqrqpnhh akkedkpkgs gavvkgsgsk qdtyvdkaef
      841 ekgrkqesss enkqpppnqq vdhsenkrnr mneaetdskk shassnpkkl akrgeeqrsq
      901 tanespenek grgssqvvas sdkgkgiehv rtarnrekrr gpdssq
//
LOCUS       XP_040942395             946 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942395
VERSION     XP_040942395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086461.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..946
                     /product="rho GTPase-activating protein REN1 isoform X1"
                     /calculated_mol_wt=104148
     Region          2..>96
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          108..214
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          270..408
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <673..>939
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          708..788
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..946
                     /gene="LOC107920961"
                     /coded_by="XM_041086461.1:203..3043"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmasrkeep spaqlkmaik
       61 kedpsvlqqr maskredrep sqghqgdvaa aaapgsleyq nsrsgntvlk sgplflsskg
      121 igwtswkkrw filthtslvf frsdpnavsq kgnevnltlg gidlnnsgsv ivkadkklit
      181 vqfqdgrdgr tftlkaetld dlfewkaale nalsqapssa namgqngifr ndqseevdas
      241 repandkppv rstvigrpvl laledvdgap tflekalkfi eehgvrvegi lrqaadvedv
      301 krriqeyeqg ktefsseeda hvigdcvkyi lrelpsspvp asccnallea crtqrgsrvn
      361 amrlavldtf pepnrrllqr ilmmmqvvas hknenlmsts avaacmapll lrpllagdce
      421 ietdfdvggd gsmqllqaaa aanhaqaivi tlleeynqif gegsissdly sdseesgses
      481 eeaaeddsep ydedesyedd ecddetegsd vsndndeedg dddddddddd dapsetgses
      541 ghsvtsdvdv dkdsdsssss sessetghdv katkrlsssi hnpssgndgs erskgnqsks
      601 tatltkksae lskgvhgptn vedrlahhaq ipssqqsaaa ahrarrnavw grtsarknls
      661 mesidypfge efeietvede ksdlqnrlre eiegntklea svekrkktlq grqlclekev
      721 ailkeelqre rdkrtalesv lnssqeqptv lpakidektk adlndialae adiiklkkkv
      781 edlemqlnqq lekksaymnd scrqrqpnhh akkedkpkgs gavvkgsgsk qdtyvdkaef
      841 ekgrkqesss enkqpppnqq vdhsenkrnr mneaetdskk shassnpkkl akrgeeqrsq
      901 tanespenek grgssqvvas sdkgkgiehv rtarnrekrr gpdssq
//
LOCUS       XP_040942396             946 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942396
VERSION     XP_040942396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086462.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..946
                     /product="rho GTPase-activating protein REN1 isoform X1"
                     /calculated_mol_wt=104148
     Region          2..>96
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          108..214
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          270..408
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <673..>939
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          708..788
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..946
                     /gene="LOC107920961"
                     /coded_by="XM_041086462.1:178..3018"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmasrkeep spaqlkmaik
       61 kedpsvlqqr maskredrep sqghqgdvaa aaapgsleyq nsrsgntvlk sgplflsskg
      121 igwtswkkrw filthtslvf frsdpnavsq kgnevnltlg gidlnnsgsv ivkadkklit
      181 vqfqdgrdgr tftlkaetld dlfewkaale nalsqapssa namgqngifr ndqseevdas
      241 repandkppv rstvigrpvl laledvdgap tflekalkfi eehgvrvegi lrqaadvedv
      301 krriqeyeqg ktefsseeda hvigdcvkyi lrelpsspvp asccnallea crtqrgsrvn
      361 amrlavldtf pepnrrllqr ilmmmqvvas hknenlmsts avaacmapll lrpllagdce
      421 ietdfdvggd gsmqllqaaa aanhaqaivi tlleeynqif gegsissdly sdseesgses
      481 eeaaeddsep ydedesyedd ecddetegsd vsndndeedg dddddddddd dapsetgses
      541 ghsvtsdvdv dkdsdsssss sessetghdv katkrlsssi hnpssgndgs erskgnqsks
      601 tatltkksae lskgvhgptn vedrlahhaq ipssqqsaaa ahrarrnavw grtsarknls
      661 mesidypfge efeietvede ksdlqnrlre eiegntklea svekrkktlq grqlclekev
      721 ailkeelqre rdkrtalesv lnssqeqptv lpakidektk adlndialae adiiklkkkv
      781 edlemqlnqq lekksaymnd scrqrqpnhh akkedkpkgs gavvkgsgsk qdtyvdkaef
      841 ekgrkqesss enkqpppnqq vdhsenkrnr mneaetdskk shassnpkkl akrgeeqrsq
      901 tanespenek grgssqvvas sdkgkgiehv rtarnrekrr gpdssq
//
LOCUS       XP_040942397             945 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942397
VERSION     XP_040942397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086463.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..945
                     /product="rho GTPase-activating protein REN1 isoform X2"
                     /calculated_mol_wt=104020
     Region          2..>96
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          108..214
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          270..408
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <673..>938
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          708..788
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..945
                     /gene="LOC107920961"
                     /coded_by="XM_041086463.1:177..3014"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmasrkeep spaqlkmaik
       61 kedpsvlqqr maskredrep sqghqgdvaa aaapgsleyq nsrsgntvlk sgplflsskg
      121 igwtswkkrw filthtslvf frsdpnavsq kgnevnltlg gidlnnsgsv ivkadkklit
      181 vqfqdgrdgr tftlkaetld dlfewkaale nalsqapssa namgqngifr ndqseevdas
      241 repandkppv rstvigrpvl laledvdgap tflekalkfi eehgvrvegi lrqaadvedv
      301 krriqeyeqg ktefsseeda hvigdcvkyi lrelpsspvp asccnallea crtqrgsrvn
      361 amrlavldtf pepnrrllqr ilmmmqvvas hknenlmsts avaacmapll lrpllagdce
      421 ietdfdvggd gsmqllqaaa aanhaqaivi tlleeynqif gegsissdly sdseesgses
      481 eeaaeddsep ydedesyedd ecddetegsd vsndndeedg dddddddddd dapsetgses
      541 ghsvtsdvdv dkdsdsssss sessetghdv katkrlsssi hnpssgndgs erskgnqsks
      601 tatltkksae lskgvhgptn vedrlahhaq ipssqqsaaa ahrarrnavw grtsarknls
      661 mesidypfge efeietvede ksdlqnrlre eiegntklea svekrkktlq grqlclekev
      721 ailkeelqre rdkrtalesv lnssqeqptv lpakidektk adlndialae adiiklkkkv
      781 edlemqlnqq lekksaymnd scrqrqpnhh akkedkpkgs gavvkgsgsk dtyvdkaefe
      841 kgrkqessse nkqpppnqqv dhsenkrnrm neaetdskks hassnpkkla krgeeqrsqt
      901 anespenekg rgssqvvass dkgkgiehvr tarnrekrrg pdssq
//
LOCUS       XP_040942398             932 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942398
VERSION     XP_040942398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086464.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="rho GTPase-activating protein REN1 isoform X3"
                     /calculated_mol_wt=102594
     Region          94..200
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          256..394
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <659..>925
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          694..774
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..932
                     /gene="LOC107920961"
                     /coded_by="XM_041086464.1:165..2963"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmaikkedp svlqqrmask
       61 redrepsqgh qgdvaaaaap gsleyqnsrs gntvlksgpl flsskgigwt swkkrwfilt
      121 htslvffrsd pnavsqkgne vnltlggidl nnsgsvivka dkklitvqfq dgrdgrtftl
      181 kaetlddlfe wkaalenals qapssanamg qngifrndqs eevdasrepa ndkppvrstv
      241 igrpvllale dvdgaptfle kalkfieehg vrvegilrqa advedvkrri qeyeqgktef
      301 sseedahvig dcvkyilrel psspvpascc nalleacrtq rgsrvnamrl avldtfpepn
      361 rrllqrilmm mqvvashkne nlmstsavaa cmaplllrpl lagdceietd fdvggdgsmq
      421 llqaaaaanh aqaivitlle eynqifgegs issdlysdse esgseseeaa eddsepyded
      481 esyeddecdd etegsdvsnd ndeedgdddd dddddddaps etgsesghsv tsdvdvdkds
      541 dssssssess etghdvkatk rlsssihnps sgndgsersk gnqskstatl tkksaelskg
      601 vhgptnvedr lahhaqipss qqsaaaahra rrnavwgrts arknlsmesi dypfgeefei
      661 etvedeksdl qnrlreeieg ntkleasvek rkktlqgrql clekevailk eelqrerdkr
      721 talesvlnss qeqptvlpak idektkadln dialaeadii klkkkvedle mqlnqqlekk
      781 saymndscrq rqpnhhakke dkpkgsgavv kgsgskqdty vdkaefekgr kqesssenkq
      841 pppnqqvdhs enkrnrmnea etdskkshas snpkklakrg eeqrsqtane spenekgrgs
      901 sqvvassdkg kgiehvrtar nrekrrgpds sq
//
LOCUS       XP_040942399             932 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942399
VERSION     XP_040942399.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086465.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="rho GTPase-activating protein REN1 isoform X4"
                     /calculated_mol_wt=102618
     Region          94..200
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          256..394
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <659..>925
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          694..774
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..932
                     /gene="LOC107920961"
                     /coded_by="XM_041086465.1:165..2963"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkeepspaq lkmaikkedp svlqqrmask
       61 redrepsqgh qgdvaaaaap gsleyqnsrs gntvlksgpl flsskgigwt swkkrwfilt
      121 htslvffrsd pnavsqkgne vnltlggidl nnsgsvivka dkklitvqfq dgrdgrtftl
      181 kaetlddlfe wkaalenals qapssanamg qngifrndqs eevdasrepa ndkppvrstv
      241 igrpvllale dvdgaptfle kalkfieehg vrvegilrqa advedvkrri qeyeqgktef
      301 sseedahvig dcvkyilrel psspvpascc nalleacrtq rgsrvnamrl avldtfpepn
      361 rrllqrilmm mqvvashkne nlmstsavaa cmaplllrpl lagdceietd fdvggdgsmq
      421 llqaaaaanh aqaivitlle eynqifgegs issdlysdse esgseseeaa eddsepyded
      481 esyeddecdd etegsdvsnd ndeedgdddd dddddddaps etgsesghsv tsdvdvdkds
      541 dssssssess etghdvkatk rlsssihnps sgndgsersk gnqskstatl tkksaelskg
      601 vhgptnvedr lahhaqipss qqsaaaahra rrnavwgrts arknlsmesi dypfgeefei
      661 etvedeksdl qnrlreeieg ntkleasvek rkktlqgrql clekevailk eelqrerdkr
      721 talesvlnss qeqptvlpak idektkadln dialaeadii klkkkvedle mqlnqqlekk
      781 saymndscrq rqpnhhakke dkpkgsgavv kgsgskqdty vdkaefekgr kqesssenkq
      841 pppnqqvdhs enkrnrmnea etdskkshas snpkklakrg eeqrsqtane spenekgrgs
      901 sqvvassdkg kgiehvrtar nrekrrgpds sq
//
LOCUS       XP_040942400             901 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942400
VERSION     XP_040942400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086466.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..901
                     /product="rho GTPase-activating protein REN1 isoform X5"
                     /calculated_mol_wt=99158
     Region          2..>96
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     Region          108..214
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          270..408
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          <657..890
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     Region          708..788
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..901
                     /gene="LOC107920961"
                     /coded_by="XM_041086466.1:308..3013"
                     /db_xref="GeneID:107920961"
ORIGIN      
        1 matkrdepsl iqqrihskre epsqsqlkma srkedsspaq lkmasrkeep spaqlkmaik
       61 kedpsvlqqr maskredrep sqghqgdvaa aaapgsleyq nsrsgntvlk sgplflsskg
      121 igwtswkkrw filthtslvf frsdpnavsq kgnevnltlg gidlnnsgsv ivkadkklit
      181 vqfqdgrdgr tftlkaetld dlfewkaale nalsqapssa namgqngifr ndqseevdas
      241 repandkppv rstvigrpvl laledvdgap tflekalkfi eehgvrvegi lrqaadvedv
      301 krriqeyeqg ktefsseeda hvigdcvkyi lrelpsspvp asccnallea crtqrgsrvn
      361 amrlavldtf pepnrrllqr ilmmmqvvas hknenlmsts avaacmapll lrpllagdce
      421 ietdfdvggd gsmqllqaaa aanhaqaivi tlleeynqif gegsissdly sdseesgses
      481 eeaaeddsep ydedesyedd ecddetegsd vsndndeedg dddddddddd dapsetgses
      541 ghsvtsdvdv dkdsdsssss sessetghdv katkrlsssi hnpssgndgs erskgnqsks
      601 tatltkksae lskgvhgptn vedrlahhaq ipssqqsaaa ahrarrnavw grtsarknls
      661 mesidypfge efeietvede ksdlqnrlre eiegntklea svekrkktlq grqlclekev
      721 ailkeelqre rdkrtalesv lnssqeqptv lpakidektk adlndialae adiiklkkkv
      781 edlemqlnqq lekksaymnd scrqrqpnhh akkedkpkgs gavvkgsgsk qdtyvdkaef
      841 ekgrkqesss enkqpppnqq vdhsenkrnr mneaetdskk shassnpkkl akrgtakpdc
      901 k
//
LOCUS       XP_016707561            1031 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-like-specific protease 2B isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707561
VERSION     XP_016707561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852072.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1031
                     /product="probable ubiquitin-like-specific protease 2B
                     isoform X1"
                     /calculated_mol_wt=115405
     Region          377..565
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1031
                     /gene="LOC107922179"
                     /coded_by="XM_016852072.2:293..3388"
                     /db_xref="GeneID:107922179"
ORIGIN      
        1 mknglevfdf keedeisela adkylsklks pnfddaatlk cqflecvarg aavqrkgmdn
       61 ipcvdvdaid gdysfdgatt aaslgaveke fskegntdld vspeskstss eqqpdlqnei
      121 hefelrdsfs eapspgkrqv ndslsnsplr iepvdlasda nesmnersps spasdiavdn
      181 vslngnmldh cvgnipvdni dgtvvicldy vlyqencytg vsaifspdgi kiecstlsdh
      241 hgtfsfergi ddiisihcqw fqrvgymtvn lkvlskgaae aesecktsai eelkfavfdp
      301 rwsekqeait slnvkylamw salfdplmem dgddspvres yfpnfdepfe eviypkgdfd
      361 avsiskrdve llqpetfind tiidfytkyl knqiqpeerq rfhffnsfff rkladldkdp
      421 ssisdgraaf lrvhkwtrkl difgkdyifi pvnfnlhwsl lvichlgeva sfkdedlvnl
      481 skvpcilhmd sirgnhaglk nlvqsylwee wkerhketse dlsskflnlr fvslelpqqe
      541 nsfdcglfll hylelflaea ppnfnpfkin kfskflnldw fpptdaslkr tliqklifel
      601 leirsrdiss shcsdeniss kssenienen gvefitesfs pevayngnld sqvgqgiemt
      661 llasssmrnt gsvndsglvl reffdpgvta gpllgqfqsf dhppyynlng aispteeevq
      721 tgqpfaylas getgfpqfsv itpqaceaay sssgfargst wnpgismqge hkvdtsfets
      781 sasgdeeeee ddvgiiecnp sqikmdriek qdtdqeqshl venvecqrkv fmpasirvle
      841 tsitevygts edaikiciss enadlrskdd fpvllhqnlg aavnqldqdp qlieknaemv
      901 qnevrgddvr tlgedlpsed nstlssyksp nlllnqldqd serlkdkear gddvqtindd
      961 ipsednstvs shqnpstmln qlyqdsnvve nketidddvq itsdgmlael agqpvakrmr
     1021 fttsfeekvd s
//
LOCUS       XP_016707562            1020 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-like-specific protease 2B isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707562
VERSION     XP_016707562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852073.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1020
                     /product="probable ubiquitin-like-specific protease 2B
                     isoform X2"
                     /calculated_mol_wt=114222
     Region          366..554
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1020
                     /gene="LOC107922179"
                     /coded_by="XM_016852073.2:293..3355"
                     /db_xref="GeneID:107922179"
ORIGIN      
        1 mknglevfdf keedeisela adkylsklks pnfddaatlk cqflecvarg aavqrkgmdn
       61 ipcvdvdaid gdysfdgatt aaslgaveke fskegntdld vspeskstss eqqpdlqnei
      121 hefelrdsfs eapspgkrqi epvdlasdan esmnerspss pasdiavdnv slngnmldhc
      181 vgnipvdnid gtvvicldyv lyqencytgv saifspdgik iecstlsdhh gtfsfergid
      241 diisihcqwf qrvgymtvnl kvlskgaaea esecktsaie elkfavfdpr wsekqeaits
      301 lnvkylamws alfdplmemd gddspvresy fpnfdepfee viypkgdfda vsiskrdvel
      361 lqpetfindt iidfytkylk nqiqpeerqr fhffnsfffr kladldkdps sisdgraafl
      421 rvhkwtrkld ifgkdyifip vnfnlhwsll vichlgevas fkdedlvnls kvpcilhmds
      481 irgnhaglkn lvqsylweew kerhketsed lsskflnlrf vslelpqqen sfdcglfllh
      541 ylelflaeap pnfnpfkink fskflnldwf pptdaslkrt liqklifell eirsrdisss
      601 hcsdenissk ssenieneng vefitesfsp evayngnlds qvgqgiemtl lasssmrntg
      661 svndsglvlr effdpgvtag pllgqfqsfd hppyynlnga ispteeevqt gqpfaylasg
      721 etgfpqfsvi tpqaceaays ssgfargstw npgismqgeh kvdtsfetss asgdeeeeed
      781 dvgiiecnps qikmdriekq dtdqeqshlv envecqrkvf mpasirvlet sitevygtse
      841 daikicisse nadlrskddf pvllhqnlga avnqldqdpq lieknaemvq nevrgddvrt
      901 lgedlpsedn stlssykspn lllnqldqds erlkdkearg ddvqtinddi psednstvss
      961 hqnpstmlnq lyqdsnvven ketidddvqi tsdgmlaela gqpvakrmrf ttsfeekvds
//
LOCUS       XP_016706667             208 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706667
VERSION     XP_016706667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851178.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="MADS-box protein SVP isoform X1"
                     /calculated_mol_wt=23359
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..152
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..208
                     /gene="LOC107921301"
                     /coded_by="XM_016851178.2:279..905"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkraq lqeenkllke klvsffkgkr lalvdseiat qeegmssqsv
      181 nnvyscssgp pleddssdts lklglpfs
//
LOCUS       XP_040942401             208 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942401
VERSION     XP_040942401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086467.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="MADS-box protein SVP isoform X1"
                     /calculated_mol_wt=23359
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..152
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..208
                     /gene="LOC107921301"
                     /coded_by="XM_041086467.1:136..762"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkraq lqeenkllke klvsffkgkr lalvdseiat qeegmssqsv
      181 nnvyscssgp pleddssdts lklglpfs
//
LOCUS       XP_016706668             208 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706668
VERSION     XP_016706668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851179.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="MADS-box protein SVP isoform X1"
                     /calculated_mol_wt=23359
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..152
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..208
                     /gene="LOC107921301"
                     /coded_by="XM_016851179.2:140..766"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkraq lqeenkllke klvsffkgkr lalvdseiat qeegmssqsv
      181 nnvyscssgp pleddssdts lklglpfs
//
LOCUS       XP_040942402             208 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942402
VERSION     XP_040942402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086468.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="MADS-box protein SVP isoform X1"
                     /calculated_mol_wt=23359
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..152
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..208
                     /gene="LOC107921301"
                     /coded_by="XM_041086468.1:162..788"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkraq lqeenkllke klvsffkgkr lalvdseiat qeegmssqsv
      181 nnvyscssgp pleddssdts lklglpfs
//
LOCUS       XP_016706669             203 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706669
VERSION     XP_016706669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851180.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="MADS-box protein SVP isoform X2"
                     /calculated_mol_wt=22762
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..147
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..203
                     /gene="LOC107921301"
                     /coded_by="XM_016851180.2:285..896"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkeen kllkeklvsf fkgkrlalvd seiatqeegm ssqsvnnvys
      181 cssgppledd ssdtslklgl pfs
//
LOCUS       XP_016706670             202 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016706670
VERSION     XP_016706670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851181.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="MADS-box protein SVP isoform X3"
                     /calculated_mol_wt=22637
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..151
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..202
                     /gene="LOC107921301"
                     /coded_by="XM_016851181.2:283..891"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkraq lqeenkllke kgkrlalvds eiatqeegms sqsvnnvysc
      181 ssgppledds sdtslklglp fs
//
LOCUS       XP_040942403             201 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942403
VERSION     XP_040942403.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086469.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="MADS-box protein SVP isoform X4"
                     /calculated_mol_wt=22484
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          <80..145
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..201
                     /gene="LOC107921301"
                     /coded_by="XM_041086469.1:140..745"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqirgedl qglnidelqq lekllelglt rvletkgeri
      121 mneissletk raqlqeenkl lkeklvsffk gkrlalvdse iatqeegmss qsvnnvyscs
      181 sgppleddss dtslklglpf s
//
LOCUS       XP_016706671             201 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016706671
VERSION     XP_016706671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851182.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="MADS-box protein SVP isoform X4"
                     /calculated_mol_wt=22484
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          <80..145
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..201
                     /gene="LOC107921301"
                     /coded_by="XM_016851182.2:280..885"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqirgedl qglnidelqq lekllelglt rvletkgeri
      121 mneissletk raqlqeenkl lkeklvsffk gkrlalvdse iatqeegmss qsvnnvyscs
      181 sgppleddss dtslklglpf s
//
LOCUS       XP_040942404             200 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein AGL24 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942404
VERSION     XP_040942404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086470.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..200
                     /product="MADS-box protein AGL24 isoform X5"
                     /calculated_mol_wt=22467
     Region          2..>62
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          <82..144
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..200
                     /gene="LOC107921301"
                     /coded_by="XM_041086470.1:290..892"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 rtcwegiici ptnwinhlls frqirgedlq glnidelqql ekllelgltr vletkgerim
      121 neissletkr aqlqeenkll keklvsffkg krlalvdsei atqeegmssq svnnvyscss
      181 gppleddssd tslklglpfs
//
LOCUS       XP_016706672             197 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016706672
VERSION     XP_016706672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851183.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="MADS-box protein SVP isoform X6"
                     /calculated_mol_wt=22040
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..146
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..197
                     /gene="LOC107921301"
                     /coded_by="XM_016851183.2:285..878"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqsliynr qirgedlqgl nidelqqlek llelgltrvl
      121 etkgerimne issletkeen kllkekgkrl alvdseiatq eegmssqsvn nvyscssgpp
      181 leddssdtsl klglpfs
//
LOCUS       XP_040942405             196 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040942405
VERSION     XP_040942405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086471.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..196
                     /product="MADS-box protein SVP isoform X7"
                     /calculated_mol_wt=21887
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          <80..140
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..196
                     /gene="LOC107921301"
                     /coded_by="XM_041086471.1:285..875"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqirgedl qglnidelqq lekllelglt rvletkgeri
      121 mneissletk eenkllkekl vsffkgkrla lvdseiatqe egmssqsvnn vyscssgppl
      181 eddssdtslk lglpfs
//
LOCUS       XP_040942406             195 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040942406
VERSION     XP_040942406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086472.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..195
                     /product="MADS-box protein SVP isoform X8"
                     /calculated_mol_wt=21762
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          <80..144
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..195
                     /gene="LOC107921301"
                     /coded_by="XM_041086472.1:140..727"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqirgedl qglnidelqq lekllelglt rvletkgeri
      121 mneissletk raqlqeenkl lkekgkrlal vdseiatqee gmssqsvnnv yscssgpple
      181 ddssdtslkl glpfs
//
LOCUS       XP_040942407             169 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040942407
VERSION     XP_040942407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086473.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="MADS-box protein SVP isoform X9"
                     /calculated_mol_wt=18824
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..169
                     /gene="LOC107921301"
                     /coded_by="XM_041086473.1:283..792"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqgerimn eissletkra qlqeenkllk eklvsffkgk
      121 rlalvdseia tqeegmssqs vnnvyscssg ppleddssdt slklglpfs
//
LOCUS       XP_040942408             169 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040942408
VERSION     XP_040942408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086474.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="MADS-box protein SVP isoform X9"
                     /calculated_mol_wt=18824
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..169
                     /gene="LOC107921301"
                     /coded_by="XM_041086474.1:138..647"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqgerimn eissletkra qlqeenkllk eklvsffkgk
      121 rlalvdseia tqeegmssqs vnnvyscssg ppleddssdt slklglpfs
//
LOCUS       XP_040942409             169 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein SVP isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040942409
VERSION     XP_040942409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086475.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="MADS-box protein SVP isoform X9"
                     /calculated_mol_wt=18824
     Region          2..74
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..169
                     /gene="LOC107921301"
                     /coded_by="XM_041086475.1:140..649"
                     /db_xref="GeneID:107921301"
ORIGIN      
        1 marekikikk idnltarqvt fskrrrglfk kaeelsvlcd aevaliifsa tgklfefass
       61 smkdmlgryn lhsnkldqps lelqgerimn eissletkra qlqeenkllk eklvsffkgk
      121 rlalvdseia tqeegmssqs vnnvyscssg ppleddssdt slklglpfs
//
LOCUS       XP_016708003             306 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP2A catalytic subunit
            [Gossypium hirsutum].
ACCESSION   XP_016708003
VERSION     XP_016708003.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852514.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="serine/threonine-protein phosphatase PP2A
                     catalytic subunit"
                     /calculated_mol_wt=34781
     Region          6..290
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(48,64,67..68,70..71,73,75..76,88,103..107,118..119,
                     122..123,127..128,131..132,140,265,274,284,290)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(54,56,82,86,114..115,119..120,124,164,186..188,197,
                     210..212,238,240,264..266)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(54,56,82,114,164,238)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..306
                     /gene="LOC107922465"
                     /coded_by="XM_016852514.2:478..1398"
                     /db_xref="GeneID:107922465"
ORIGIN      
        1 mpsqgdldrq iehlmeckpl seaevkalce qarailveew nvqpvkcpvt vcgdihgqfy
       61 dlielfrigg napdtnylfm gdyvdrgyys vetvtllval kvryrdriti lrgnhesrqi
      121 tqvygfydec lrkygnanvw khftdlfdyl pltaliesqv fclhgglsps ldtldnvral
      181 driqevpheg pmcdllwsdp ddrcgwgisp rgagytfgqd iaaqfnhtng lslisrahql
      241 vmegynwcqe knvvtvfsap nycyrcgnma aileigenmd qnflqfdpap rqvepdttrk
      301 tpdyfl
//
LOCUS       XP_016707738            1392 aa            linear   PLN 06-AUG-2024
DEFINITION  endoribonuclease Dicer homolog 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707738
VERSION     XP_016707738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1392
                     /product="endoribonuclease Dicer homolog 2 isoform X1"
                     /calculated_mol_wt=157786
     Region          22..220
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(22..23,26,43..50,88,151,188)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(76..77,100..101,126,128..129,132,157..159)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          371..500
                     /region_name="SF2_C_dicer"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; cd18802"
                     /db_xref="CDD:350189"
     Site            order(395..397,457,476,478)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     Site            order(461,463,488,490)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350189"
     Region          560..638
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          815..932
                     /region_name="PAZ"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; cl00301"
                     /db_xref="CDD:469713"
     Site            order(846,871,875,893,919,921)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239207"
     Region          980..1131
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(995..996,999..1000,1003,1006..1007,1010..1011,
                     1013..1015,1025,1107,1116)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(995,998,1002,1098,1101)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(998,1098,1101)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1163..1318
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1184..1185,1188..1189,1192,1195..1196,1199..1200,
                     1202..1204,1214,1291,1302)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1184,1187,1191,1281,1284)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1187,1281,1284)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1321..1386
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cl00054"
                     /db_xref="CDD:444671"
     Site            order(1327..1328,1330,1351,1370..1372,1375)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     CDS             1..1392
                     /gene="LOC107922284"
                     /coded_by="XM_016852249.2:200..4378"
                     /db_xref="GeneID:107922284"
ORIGIN      
        1 mepvgmemnn sqqhssdplp farsyqleal ekaikqntia yletgsgktl iaimllrrya
       61 ylirkpspfn avflvpqvvl veqqadavem htdlnvgkyw gdmevdfwdd akwkqeidky
      121 evlvmtpqil lnglrhgffk inmikvliid echhargkhp yasimtefyh rqleagvsdl
      181 prifgmtasp intkgansad sywqkihele timnskvytc vsesvlaqfv pfstpkfkfy
      241 qdmeipyvly arlvqelnvl kvkhecsldn ldleasaaes trrkiskihs alihcldelg
      301 vwlalkaaey lscyeseflm wgkldvfgdk ivrsysvdaf haigtcipsd pdwtivndvk
      361 asvddgfltt kvlcliesls eyrvlrdirc iifveriita vvlqslfsel lpkygnwktk
      421 yiagnnsglq nqtrkkqnei veefrkgmvn iivatsilee gldvqacnli irfdpsptvc
      481 sfiqsrgrar mqnsdyllmv ksgdfsthsr lknyltsgdv mrkeslchas dpcsplsndl
      541 cdeefyhvas tgafmtlsss vgliyfycsr lpadgyfkpt lrciidkqmg vctlhlpkss
      601 pirtvcvkgn fkslkqkacf eackqlhqig altdnlvpdi vveendveei gkesynddqp
      661 iffppelvnq dsqesmtkyy cylmelkqnf gyefpvqnii llvrsqleme aksvgielev
      721 drgtltvnlk yiglirlssd qvilcrrfqi alfrvlmdhk aekltelsdl tsgnnseidy
      781 lllpsnymgq npvidwlsis silfsyekvw knhvncnagm iqtksglvct cmiknslvst
      841 hngrtyiidg llnninansl ltlsdggvmt ykeyyeqrhg ihlcfsrvsf lagrhifpvq
      901 nhiqrckkqk ekessnafve lppelcdvim spisistfys ftflpsimhr leslllatil
      961 kkmlldhcvh nvaiptmkvl eaittkkcle sfhlesletl gdsflkyavc qqlfkkhqnh
     1021 hegllsirkd kmisnttlcm lgcdkklpgf icdepfdpkg wmvpgyncgr htlneeklnt
     1081 rkiyvsgrrk lkskkvadvv ealigaylst ggevaallfm nwigitidfr nipyerhfev
     1141 qaekivnvqh lesllnysfq dpsllvealt hgsymlaeip gcyqrleflg dsvldylitr
     1201 hlynkypgis pglltdlrsa svnnncyals avkaglhkhi lqssqklykh iketvesfqe
     1261 lsldctfgwe seksfpkvlg dvmeslagai fvdsgynket vfrsirplle plitletmtv
     1321 hpvkelnelc qkkhyerrkp ivshgngvss vtieveange vlkhtstacd kkmakklask
     1381 eilkslklan fc
//
LOCUS       XP_016707739            1356 aa            linear   PLN 06-AUG-2024
DEFINITION  endoribonuclease Dicer homolog 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707739
VERSION     XP_016707739.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852250.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1356
                     /product="endoribonuclease Dicer homolog 2 isoform X2"
                     /calculated_mol_wt=153931
     Region          22..220
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(22..23,26,43..50,88,151,188)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(76..77,100..101,126,128..129,132,157..159)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          351..464
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            452
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
     Region          524..602
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          779..896
                     /region_name="PAZ"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; cl00301"
                     /db_xref="CDD:469713"
     Site            order(810,835,839,857,883,885)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239207"
     Region          944..1095
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(959..960,963..964,967,970..971,974..975,977..979,
                     989,1071,1080)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(959,962,966,1062,1065)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(962,1062,1065)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1127..1282
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1148..1149,1152..1153,1156,1159..1160,1163..1164,
                     1166..1168,1178,1255,1266)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1148,1151,1155,1245,1248)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1151,1245,1248)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1285..1350
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cl00054"
                     /db_xref="CDD:444671"
     Site            order(1291..1292,1294,1315,1334..1336,1339)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     CDS             1..1356
                     /gene="LOC107922284"
                     /coded_by="XM_016852250.2:200..4270"
                     /db_xref="GeneID:107922284"
ORIGIN      
        1 mepvgmemnn sqqhssdplp farsyqleal ekaikqntia yletgsgktl iaimllrrya
       61 ylirkpspfn avflvpqvvl veqqadavem htdlnvgkyw gdmevdfwdd akwkqeidky
      121 evlvmtpqil lnglrhgffk inmikvliid echhargkhp yasimtefyh rqleagvsdl
      181 prifgmtasp intkgansad sywqkihele timnskvytc vsesvlaqfv pfstpkfkfy
      241 qdmeipyvly arlvqelnvl kvkhecsldn ldleasaaes trrkiskihs alihcldelg
      301 vwlalkiqig pslmmlkpvw mmgflpqkfy allnlflntg ntvftkwvlr dirciifver
      361 iitavvlqsl fsellpkygn wktkyiagnn sglqnqtrkk qneiveefrk gmvniivats
      421 ileegldvqa cnliirfdps ptvcsfiqsr grarmqnsdy llmvksgdfs thsrlknylt
      481 sgdvmrkesl chasdpcspl sndlcdeefy hvastgafmt lsssvgliyf ycsrlpadgy
      541 fkptlrciid kqmgvctlhl pksspirtvc vkgnfkslkq kacfeackql hqigaltdnl
      601 vpdivveend veeigkesyn ddqpiffppe lvnqdsqesm tkyycylmel kqnfgyefpv
      661 qniillvrsq lemeaksvgi elevdrgtlt vnlkyiglir lssdqvilcr rfqialfrvl
      721 mdhkaeklte lsdltsgnns eidylllpsn ymgqnpvidw lsissilfsy ekvwknhvnc
      781 nagmiqtksg lvctcmikns lvsthngrty iidgllnnin anslltlsdg gvmtykeyye
      841 qrhgihlcfs rvsflagrhi fpvqnhiqrc kkqkekessn afvelppelc dvimspisis
      901 tfysftflps imhrleslll atilkkmlld hcvhnvaipt mkvleaittk kclesfhles
      961 letlgdsflk yavcqqlfkk hqnhheglls irkdkmisnt tlcmlgcdkk lpgficdepf
     1021 dpkgwmvpgy ncgrhtlnee klntrkiyvs grrklkskkv advvealiga ylstggevaa
     1081 llfmnwigit idfrnipyer hfevqaekiv nvqhleslln ysfqdpsllv ealthgsyml
     1141 aeipgcyqrl eflgdsvldy litrhlynky pgispglltd lrsasvnnnc yalsavkagl
     1201 hkhilqssqk lykhiketve sfqelsldct fgweseksfp kvlgdvmesl agaifvdsgy
     1261 nketvfrsir plleplitle tmtvhpvkel nelcqkkhye rrkpivshgn gvssvtieve
     1321 angevlkhts tacdkkmakk laskeilksl klanfc
//
LOCUS       XP_040942410            1308 aa            linear   PLN 06-AUG-2024
DEFINITION  endoribonuclease Dicer homolog 2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942410
VERSION     XP_040942410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086476.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1308
                     /product="endoribonuclease Dicer homolog 2 isoform X3"
                     /calculated_mol_wt=148305
     Region          22..220
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(22..23,26,43..50,88,151,188)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(76..77,100..101,126,128..129,132,157..159)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          <339..416
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            404
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
     Region          476..554
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          731..848
                     /region_name="PAZ"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; cl00301"
                     /db_xref="CDD:469713"
     Site            order(762,787,791,809,835,837)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239207"
     Region          896..1047
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(911..912,915..916,919,922..923,926..927,929..931,
                     941,1023,1032)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(911,914,918,1014,1017)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(914,1014,1017)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1079..1234
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1100..1101,1104..1105,1108,1111..1112,1115..1116,
                     1118..1120,1130,1207,1218)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1100,1103,1107,1197,1200)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1103,1197,1200)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1237..1302
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cl00054"
                     /db_xref="CDD:444671"
     Site            order(1243..1244,1246,1267,1286..1288,1291)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     CDS             1..1308
                     /gene="LOC107922284"
                     /coded_by="XM_041086476.1:199..4125"
                     /db_xref="GeneID:107922284"
ORIGIN      
        1 mepvgmemnn sqqhssdplp farsyqleal ekaikqntia yletgsgktl iaimllrrya
       61 ylirkpspfn avflvpqvvl veqqadavem htdlnvgkyw gdmevdfwdd akwkqeidky
      121 evlvmtpqil lnglrhgffk inmikvliid echhargkhp yasimtefyh rqleagvsdl
      181 prifgmtasp intkgansad sywqkihele timnskvytc vsesvlaqfv pfstpkfkfy
      241 qdmeipyvly arlvqelnvl kvkhecsldn ldleasaaes trrkiskihs alihcldelg
      301 vwlalkiqig pslmmlkpvw mmgflpqkfy allnlflntg nnsglqnqtr kkqneiveef
      361 rkgmvniiva tsileegldv qacnliirfd psptvcsfiq srgrarmqns dyllmvksgd
      421 fsthsrlkny ltsgdvmrke slchasdpcs plsndlcdee fyhvastgaf mtlsssvgli
      481 yfycsrlpad gyfkptlrci idkqmgvctl hlpksspirt vcvkgnfksl kqkacfeack
      541 qlhqigaltd nlvpdivvee ndveeigkes ynddqpiffp pelvnqdsqe smtkyycylm
      601 elkqnfgyef pvqniillvr sqlemeaksv gielevdrgt ltvnlkyigl irlssdqvil
      661 crrfqialfr vlmdhkaekl telsdltsgn nseidylllp snymgqnpvi dwlsissilf
      721 syekvwknhv ncnagmiqtk sglvctcmik nslvsthngr tyiidgllnn inanslltls
      781 dggvmtykey yeqrhgihlc fsrvsflagr hifpvqnhiq rckkqkekes snafvelppe
      841 lcdvimspis istfysftfl psimhrlesl llatilkkml ldhcvhnvai ptmkvleait
      901 tkkclesfhl esletlgdsf lkyavcqqlf kkhqnhhegl lsirkdkmis nttlcmlgcd
      961 kklpgficde pfdpkgwmvp gyncgrhtln eeklntrkiy vsgrrklksk kvadvveali
     1021 gaylstggev aallfmnwig itidfrnipy erhfevqaek ivnvqhlesl lnysfqdpsl
     1081 lvealthgsy mlaeipgcyq rleflgdsvl dylitrhlyn kypgispgll tdlrsasvnn
     1141 ncyalsavka glhkhilqss qklykhiket vesfqelsld ctfgweseks fpkvlgdvme
     1201 slagaifvds gynketvfrs irplleplit letmtvhpvk elnelcqkkh yerrkpivsh
     1261 gngvssvtie veangevlkh tstacdkkma kklaskeilk slklanfc
//
LOCUS       XP_016708191             451 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-L1-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708191
VERSION     XP_016708191.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852702.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="cyclin-L1-1 isoform X1"
                     /calculated_mol_wt=51837
     Region          21..148
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          150..250
                     /region_name="CYCLIN_AcCycL_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     L-type cyclins (CycL) and similar proteins; cd20594"
                     /db_xref="CDD:410297"
     CDS             1..451
                     /gene="LOC107922601"
                     /coded_by="XM_016852702.2:205..1560"
                     /db_xref="GeneID:107922601"
ORIGIN      
        1 miytaidnfy ltdeqlknsp sskdgidgat ettlriygcd liqesgillk lpqavmatgq
       61 vlfhrfyckk sfarfdvkiv aasslwlask leesprrarq viivfhrmec rrenlpiehl
      121 dlyskkfsdl kaelsrterh ilkemgfvch vehphkfisn ylatletppe lrqeawnlan
      181 dslrttlcvr fksevvacgv vyaaarrfqv plpenppwwk afdadksgid evcrvlarly
      241 slpkaqyipv ckdgkpftfs trsadsqsqq ppkevplspp annnanvsnt tvavadvete
      301 ganeakikma rdklkeskqs ddesksmptt dsdareeprh ksksehktes sgekskdrdr
      361 ererdrerdr erakardrdr grdsdrerer deterdrdkv kdrghrskdr tkdsagghse
      421 ksrhhssrdr dyrgssyssr ekdrhrhhsy a
//
LOCUS       XP_040942411             451 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-L1-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942411
VERSION     XP_040942411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086477.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="cyclin-L1-1 isoform X1"
                     /calculated_mol_wt=51837
     Region          21..148
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          150..250
                     /region_name="CYCLIN_AcCycL_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     L-type cyclins (CycL) and similar proteins; cd20594"
                     /db_xref="CDD:410297"
     CDS             1..451
                     /gene="LOC107922601"
                     /coded_by="XM_041086477.1:339..1694"
                     /db_xref="GeneID:107922601"
ORIGIN      
        1 miytaidnfy ltdeqlknsp sskdgidgat ettlriygcd liqesgillk lpqavmatgq
       61 vlfhrfyckk sfarfdvkiv aasslwlask leesprrarq viivfhrmec rrenlpiehl
      121 dlyskkfsdl kaelsrterh ilkemgfvch vehphkfisn ylatletppe lrqeawnlan
      181 dslrttlcvr fksevvacgv vyaaarrfqv plpenppwwk afdadksgid evcrvlarly
      241 slpkaqyipv ckdgkpftfs trsadsqsqq ppkevplspp annnanvsnt tvavadvete
      301 ganeakikma rdklkeskqs ddesksmptt dsdareeprh ksksehktes sgekskdrdr
      361 ererdrerdr erakardrdr grdsdrerer deterdrdkv kdrghrskdr tkdsagghse
      421 ksrhhssrdr dyrgssyssr ekdrhrhhsy a
//
LOCUS       XP_016708192             450 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-L1-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708192
VERSION     XP_016708192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852703.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="cyclin-L1-1 isoform X2"
                     /calculated_mol_wt=51766
     Region          21..148
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          150..250
                     /region_name="CYCLIN_AcCycL_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     L-type cyclins (CycL) and similar proteins; cd20594"
                     /db_xref="CDD:410297"
     CDS             1..450
                     /gene="LOC107922601"
                     /coded_by="XM_016852703.2:205..1557"
                     /db_xref="GeneID:107922601"
ORIGIN      
        1 miytaidnfy ltdeqlknsp sskdgidgat ettlriygcd liqesgillk lpqavmatgq
       61 vlfhrfyckk sfarfdvkiv aasslwlask leesprrarq viivfhrmec rrenlpiehl
      121 dlyskkfsdl kaelsrterh ilkemgfvch vehphkfisn ylatletppe lrqeawnlan
      181 dslrttlcvr fksevvacgv vyaaarrfqv plpenppwwk afdadksgid evcrvlarly
      241 slpkaqyipv ckdgkpftfs trsadsqsqq ppkevplspp annnanvsnt tvavadvete
      301 ganeakikma rdklkeskqs ddesksmptt dsdareeprh ksksehktes sgekskdrdr
      361 ererdrerdr erakardrdr grdsdrerer deterdrdkv kdrghrskdr tkdsgghsek
      421 srhhssrdrd yrgssyssre kdrhrhhsya
//
LOCUS       XP_040942412             450 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-L1-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942412
VERSION     XP_040942412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086478.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="cyclin-L1-1 isoform X2"
                     /calculated_mol_wt=51766
     Region          21..148
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          150..250
                     /region_name="CYCLIN_AcCycL_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     L-type cyclins (CycL) and similar proteins; cd20594"
                     /db_xref="CDD:410297"
     CDS             1..450
                     /gene="LOC107922601"
                     /coded_by="XM_041086478.1:335..1687"
                     /db_xref="GeneID:107922601"
ORIGIN      
        1 miytaidnfy ltdeqlknsp sskdgidgat ettlriygcd liqesgillk lpqavmatgq
       61 vlfhrfyckk sfarfdvkiv aasslwlask leesprrarq viivfhrmec rrenlpiehl
      121 dlyskkfsdl kaelsrterh ilkemgfvch vehphkfisn ylatletppe lrqeawnlan
      181 dslrttlcvr fksevvacgv vyaaarrfqv plpenppwwk afdadksgid evcrvlarly
      241 slpkaqyipv ckdgkpftfs trsadsqsqq ppkevplspp annnanvsnt tvavadvete
      301 ganeakikma rdklkeskqs ddesksmptt dsdareeprh ksksehktes sgekskdrdr
      361 ererdrerdr erakardrdr grdsdrerer deterdrdkv kdrghrskdr tkdsgghsek
      421 srhhssrdrd yrgssyssre kdrhrhhsya
//
LOCUS       XP_016707472             835 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial substrate carrier family protein C [Gossypium
            hirsutum].
ACCESSION   XP_016707472
VERSION     XP_016707472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851983.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..835
                     /product="mitochondrial substrate carrier family protein
                     C"
                     /calculated_mol_wt=91757
     Region          <374..423
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          <443..521
                     /region_name="EFh_PEF"
                     /note="The penta-EF hand (PEF) family; cl25352"
                     /db_xref="CDD:355382"
     Region          461..486
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          494..521
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          556..811
                     /region_name="PTZ00168"
                     /note="mitochondrial carrier protein; Provisional"
                     /db_xref="CDD:185494"
     Region          732..822
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..835
                     /gene="LOC107922131"
                     /coded_by="XM_016851983.2:482..2989"
                     /db_xref="GeneID:107922131"
ORIGIN      
        1 mlskndpies isnsiqfvke aflplelgik kaakdvescf gvsndkgklv elvpqlnvsd
       61 rndkvqifgm kksngnfgsi lnngqcclgs eerkkgpsvk vpikafigmf spgngkndek
      121 veavrkglke kdvdrdegsc mncfqfsatw svlvngfvqa ipssfntgrk riqkmgdkdk
      181 gcrhssthdm kskasseckh reakaqfsak neglehsdgk hvecfiglil dqltqnlqkf
      241 dqllqesnrk hcecpqtpsp psqfdyfkvv asiwegqkad vngflgnlkf arvggvpsgm
      301 vgvashvnee gdddvstgrr eestgnspqk lasgilsipl snverlrstl stvsltelve
      361 llpllgrssq dhpdkkklfs vqdffrytes egrrffeeld rdgdghvtle dlevamrkrk
      421 lpqryarefm rrtrshlfsk sfnwkqflsl meqkeptilr aytslclsks gtlqkseila
      481 slknaglpan ednavammrf lnadteesis yghfrnfmll lpsdrllqdd prniwfeaat
      541 vvavappvei hagsvlksal agglscalst sllhpvdtik trvqastltf peiisklpqi
      601 gvrglyrgsi pailgqfssh glrtgifeas klvlinvapn lpdiqvqsma sfcstllgta
      661 vripcevlkq rlqaglfdnv geaivgtwnq dglkgffrgt gatlcrevpf yvagmglyae
      721 skklaqqllq relepwetia vgavsgglaa vvttpfdvmk trmmtapggr pismsvvafs
      781 ilrhegplgl fkgavprffw iaplgamnfa gyelakkamv kneedqlsqk klaki
//
LOCUS       XP_016708216             168 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase subunit d, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016708216
VERSION     XP_016708216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852727.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..168
                     /product="ATP synthase subunit d, mitochondrial"
                     /calculated_mol_wt=19457
     Region          14..154
                     /region_name="Mt_ATP-synt_D"
                     /note="ATP synthase D chain, mitochondrial (ATP5H);
                     pfam05873"
                     /db_xref="CDD:461764"
     CDS             1..168
                     /gene="LOC107922615"
                     /coded_by="XM_016852727.2:132..638"
                     /db_xref="GeneID:107922615"
ORIGIN      
        1 msgagkkvvd vafkagksid wegmakllvs dearkefatl rrtfdevnst lqtkfsqepe
       61 pidweyyrkg igsrlvdmyk eayesveipk fvdtvtpqfk pkfdallvel keaeekslke
      121 serlekeiad vqelkqkist mtadeyfekh pelkkkfdde irndnwgy
//
LOCUS       XP_016706569             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706569
VERSION     XP_016706569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851080.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..111
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12682
     Region          11..106
                     /region_name="Complex1_LYR_SF"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     Complex1_LYR-like superfamily; cl40429"
                     /db_xref="CDD:477356"
     Site            12..14
                     /site_type="other"
                     /note="LYR motif"
                     /db_xref="CDD:380755"
     CDS             1..111
                     /gene="LOC107921198"
                     /coded_by="XM_016851080.2:152..487"
                     /db_xref="GeneID:107921198"
ORIGIN      
        1 mgsqqameaf kvyrvllkav knhigkeeyk khfsqyiaeq frknsqlsdp slvaqrikla
       61 ndytyllnsv hhhkdllfsy niavdrsdem krllgksaas vglklpevyq p
//
LOCUS       XP_016706263             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706263
VERSION     XP_016706263.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850774.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706263.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13138
     Region          <55..89
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..119
                     /gene="LOC107920941"
                     /coded_by="XM_016850774.2:242..601"
                     /db_xref="GeneID:107920941"
ORIGIN      
        1 mtmassntpi pvddgfneye salkcqkstt skvwdemtkl dcenknelka qcnhssesaf
       61 smdkkvitpl kssltpktvq vvvclddwmr akgfstkigc kkddkddedn eddvssvaf
//
LOCUS       XP_040942414             867 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942414
VERSION     XP_040942414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086480.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..867
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=98968
     Region          <53..445
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          812..864
                     /region_name="mRING-HC-C3HC5_NEU1"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in neuralized-like protein NEURL1A, NEURL1B, and
                     similar proteins; cd16647"
                     /db_xref="CDD:438309"
     CDS             1..867
                     /gene="LOC107922279"
                     /coded_by="XM_041086480.1:437..3040"
                     /db_xref="GeneID:107922279"
ORIGIN      
        1 mtdfqalqqk pdssndatae fergleelmr ghlddcmsfa scssnrnpdd eddegdqlir
       61 rrrrsdlegd dlaessaarr rhsrilsrwa arqaqemitt ierrnresel malaglhtvs
      121 tldssflres psansrrqgg tverpntras silqmwrele dehmlnrare rvrerlrqqr
      181 nadgnttmss ttlseshese nhgsvvdase seneygtwsn eqgvsqneve dnngssreqs
      241 pdlgeverer vrqivrgwme sgisdhsssr vsrvggprae wlgetererv rivrewvqmt
      301 sqqrgvrggr redhqaaatv gtqvnqpreg svadhdegqp ehirrdllrl rgrqavidll
      361 mriererqre lqsllehrav sdfahrnriq sllrgrflrn erpveeerap smaaseliql
      421 rqrhtvsglr egfrnrleti vhgqassnpe ttssnvidds rnelsqsntl qdaqherseh
      481 tqtrssesdv sqsqtgdmvs tmaaesiswq gnanqggnwq epttndergn wqqppyaqfn
      541 ewregnaeel dtnwqegsvs eyrqenpgnv ngeeshsqga qrvwredgsr eavdnwsegp
      601 sgpprprrsi pvrrfnrfhp peddnvysme lrellsrrsv snllrsgfre sldqlihsyv
      661 erqgrspidw dlhrnlptpa sperdqeqqr dginddqnna isrpslvlps ppvpppqplw
      721 hqdlhhtsws rpsmhrseie wemvndlrad marlqqgmsh mqrmleacmd mqlelqrsvr
      781 qevsaalnrs vgekvlsvet sedgskwghv rkgtccvccd shidsllyrc ghmctcskca
      841 nelvrgggkc plcrapivev iraysil
//
LOCUS       XP_040942415             863 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942415
VERSION     XP_040942415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086481.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..863
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=98569
     Region          <53..445
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          808..860
                     /region_name="mRING-HC-C3HC5_NEU1"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in neuralized-like protein NEURL1A, NEURL1B, and
                     similar proteins; cd16647"
                     /db_xref="CDD:438309"
     CDS             1..863
                     /gene="LOC107922279"
                     /coded_by="XM_041086481.1:437..3028"
                     /db_xref="GeneID:107922279"
ORIGIN      
        1 mtdfqalqqk pdssndatae fergleelmr ghlddcmsfa scssnrnpdd eddegdqlir
       61 rrrrsdlegd dlaessaarr rhsrilsrwa arqaqemitt ierrnresel malaglhtvs
      121 tldssflres psansrrqgg tverpntras silqmwrele dehmlnrare rvrerlrqqr
      181 nadgnttmss ttlseshese nhgsvvdase seneygtwsn eqgvsqneve dnngssreqs
      241 pdlgeverer vrqivrgwme sgisdhsssr vsrvggprae wlgetererv rivrewvqmt
      301 sqqrgvrggr redhqaaatv gtqvnqpreg svadhdegqp ehirrdllrl rgrqavidll
      361 mriererqre lqsllehrav sdfahrnriq sllrgrflrn erpveeerap smaaseliql
      421 rqrhtvsglr egfrnrleti vhgqassnpe ttssnvidds rnelsqsntl qdaqherseh
      481 tqtrssesdv sqsqtgdmvs tmaaesiswq gnanqggnwq epttndergn wqqppyaqfn
      541 ewregnaeel dtnwqegsvs eyrqenpgnv ngeeshsqga qrvwredgsr eavdnwsegp
      601 sgpprprrsi pvrrfnrfhp peddnvysme lrellsrrsv snllrsgfre sldqlihsyv
      661 erqgrspidw dlhrnlptpa sperdqeqqr dginddqnna isrpslvlps ppvpppqplw
      721 hqdlhhtsws rpsmhrseie wemvndlrad marlqqgmsh mqrmleacmd mqlelqrsvr
      781 qevsaalnrs vgeketsedg skwghvrkgt ccvccdshid sllyrcghmc tcskcanelv
      841 rgggkcplcr apiveviray sil
//
LOCUS       XP_016707187             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707187
VERSION     XP_016707187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851698.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..257
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29159
     Region          105..228
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(107..110,146..147,148,172,212,226)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..257
                     /gene="LOC107921868"
                     /coded_by="XM_016851698.2:161..934"
                     /db_xref="GeneID:107921868"
ORIGIN      
        1 mcaitmptkl aafawrlcqs ilhhlfsngp hwlefvspei snedyerllt illalwsakn
       61 gnlipekdrn ekenpdldqa mmskptvfpt knrwipppmg lhkvnfdgaf dgdgkkggig
      121 viirddegfv wggaaikidn vmegnineaw aavkalkvaq emgyrriile sdcfwvlnil
      181 lmedvddgsy irciveegkr vmgeleecyf hhieregnhv anliarhgvi msegdfywkh
      241 dypnfihqsi mcdainl
//
LOCUS       XP_016708082             432 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708082
VERSION     XP_016708082.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852593.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..432
                     /product="uncharacterized protein"
                     /calculated_mol_wt=47232
     CDS             1..432
                     /gene="LOC107922513"
                     /coded_by="XM_016852593.2:230..1528"
                     /db_xref="GeneID:107922513"
ORIGIN      
        1 mhavkggwvg qtfalakcne sggkktrvrr skeerksmve sfikkyqesn ngnfpslnlt
       61 hkevggsfyi ireivreiiq enrvlgpakl tegehdidrf lqqnplgsis tppepllseq
      121 sngssfvpsh hedesdesvm itngnsmese nkefgsekii ngnlvdvtng tdkaalvevq
      181 vieppesdks kketyvftsk viqveadivv etfplrpvak ptdsvngmss evgkldenly
      241 ktengklnvs qengsfkldg mnssevsvlt ddgkevennv gllleknsnl tdkkmvesis
      301 dplsessecs tgvtaklgtp ngaalevsrt dtlmsdtneq skaivgeain vsngfhpknh
      361 gtyestsera vaveskvdaq hvnskkgssk tldrinlesw egtsksraes etnplwtifk
      421 sfvtafinfw se
//
LOCUS       XP_016708214             471 aa            linear   PLN 06-AUG-2024
DEFINITION  SEC12-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016708214
VERSION     XP_016708214.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852725.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708214.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..471
                     /product="SEC12-like protein 1"
                     /calculated_mol_wt=52677
     Region          <135..392
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          152..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..279
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          284..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          334..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..471
                     /gene="LOC107922614"
                     /coded_by="XM_016852725.2:67..1482"
                     /db_xref="GeneID:107922614"
ORIGIN      
        1 mlvkqarrgf qntllwdppp kihnrirfvs lvplslcpap tllyflsqrl llfinfffnr
       61 sktqqnfkyl klkisfisss megeaggsvs cgswirrpen vnwvvlarim trptsssssv
      121 ieifpfdpnt tslsssplar heleesdgdp itiavhpsgd cfvcsttngg cklfelygqe
      181 thlqlstkel pplldagpqk clafsvdgsr faaggvdgrl rilewptlri ivdevrahks
      241 frdmdfslds eflaststdg sariwktedg vplmtlarns dekielcrfs kdgtkpflfc
      301 tvqrgdkavt avydistwnk ighkrllgkp asvmsvsldg kylalgskdg dicvvevkkm
      361 eishwnkrlh lgtsiaslef cpsqrvvltt ssqwgamvtk lnvpadwkew qiyllllglf
      421 lasavvfyif feksdsfwnf piareqtrrn idsflgdaqs ddpnvfgpld m
//
LOCUS       XP_016707353             846 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol-3-phosphatase myotubularin-1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707353
VERSION     XP_016707353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851864.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..846
                     /product="phosphatidylinositol-3-phosphatase
                     myotubularin-1 isoform X1"
                     /calculated_mol_wt=93718
     Region          73..159
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          216..586
                     /region_name="Myotub-related"
                     /note="Myotubularin-like phosphatase domain; pfam06602"
                     /db_xref="CDD:461958"
     CDS             1..846
                     /gene="LOC107922039"
                     /coded_by="XM_016851864.2:345..2885"
                     /db_xref="GeneID:107922039"
ORIGIN      
        1 maasrpsrsv sardisigce rldgagswdt lewtkiepvt rsvshanfef lleaervlde
       61 ghgvvlvntd eagtlfvtnf rllflsdgtr nivplgtipl atiekfnkmv vkiqstsrna
      121 nksssrrllq iigkdmriiv fcfrprtkqr raifdalsrc tkperiwdly aftcgpskfc
      181 nlspkvrlln eyfrllgkgf hhasmrmied gsftmsndsw risdinfnys lcqsypfall
      241 vpksvsddei iqasnfrars rvpavswcnp etgavlarss qplvgimntr stadeklvaa
      301 lcaqlsdekd srrklyiada rprknalang amgggsesss nyfqseivff gidnihamre
      361 sfarfrdyld thgaassdgm ssflrhggwt wgggnlssms asvstlgdsg wlihvqsvla
      421 gsawiaarva lesaavlvhc sdgwdrtsql vslanlmldp yyrtftgfqa lvekdwlafg
      481 hpfsdrvgmp sisgssfels rnasstgsfs ssplrqssgs sqasnsshaq nnyspiflqw
      541 vdcvsqllri ypfafefssn flvdfldcvl scrfgnflcn sekerqicgv descgclway
      601 ladmrssegr shahynlfyd tlkhngpllp paaalaptlw pqfhlrwacp fesqagelea
      661 ecrnmaikfs elqkakevae mkakeylaam eilnvdlqne kqvsssainl akraskenaa
      721 iqravqslgc rvnftnssds tvdvesslme tsqrfslprr eseytmehnd rsdlsvsitv
      781 vaddvvpsss plgqvcetlc plrtqgrgcq wpdaacaqlg sqfvglkanf dafdrlsiyd
      841 ryfkse
//
LOCUS       XP_016707354             822 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol-3-phosphatase myotubularin-1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707354
VERSION     XP_016707354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851865.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..822
                     /product="phosphatidylinositol-3-phosphatase
                     myotubularin-1 isoform X2"
                     /calculated_mol_wt=91120
     Region          73..135
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          192..562
                     /region_name="Myotub-related"
                     /note="Myotubularin-like phosphatase domain; pfam06602"
                     /db_xref="CDD:461958"
     CDS             1..822
                     /gene="LOC107922039"
                     /coded_by="XM_016851865.2:286..2754"
                     /db_xref="GeneID:107922039"
ORIGIN      
        1 maasrpsrsv sardisigce rldgagswdt lewtkiepvt rsvshanfef lleaervlde
       61 ghgvvlvntd eagtlfvtnf rllflvvkiq stsrnankss srrllqiigk dmriivfcfr
      121 prtkqrraif dalsrctkpe riwdlyaftc gpskfcnlsp kvrllneyfr llgkgfhhas
      181 mrmiedgsft msndswrisd infnyslcqs ypfallvpks vsddeiiqas nfrarsrvpa
      241 vswcnpetga vlarssqplv gimntrstad eklvaalcaq lsdekdsrrk lyiadarprk
      301 nalangamgg gsesssnyfq seivffgidn ihamresfar frdyldthga assdgmssfl
      361 rhggwtwggg nlssmsasvs tlgdsgwlih vqsvlagsaw iaarvalesa avlvhcsdgw
      421 drtsqlvsla nlmldpyyrt ftgfqalvek dwlafghpfs drvgmpsisg ssfelsrnas
      481 stgsfssspl rqssgssqas nsshaqnnys piflqwvdcv sqllriypfa fefssnflvd
      541 fldcvlscrf gnflcnseke rqicgvdesc gclwayladm rssegrshah ynlfydtlkh
      601 ngpllppaaa laptlwpqfh lrwacpfesq ageleaecrn maikfselqk akevaemkak
      661 eylaameiln vdlqnekqvs ssainlakra skenaaiqra vqslgcrvnf tnssdstvdv
      721 esslmetsqr fslprresey tmehndrsdl svsitvvadd vvpsssplgq vcetlcplrt
      781 qgrgcqwpda acaqlgsqfv glkanfdafd rlsiydryfk se
//
LOCUS       XP_016707355             738 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol-3-phosphatase myotubularin-1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016707355
VERSION     XP_016707355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..738
                     /product="phosphatidylinositol-3-phosphatase
                     myotubularin-1 isoform X3"
                     /calculated_mol_wt=81861
     Region          <21..51
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          108..478
                     /region_name="Myotub-related"
                     /note="Myotubularin-like phosphatase domain; pfam06602"
                     /db_xref="CDD:461958"
     CDS             1..738
                     /gene="LOC107922039"
                     /coded_by="XM_016851866.2:285..2501"
                     /db_xref="GeneID:107922039"
ORIGIN      
        1 mvvkiqstsr nanksssrrl lqiigkdmri ivfcfrprtk qrraifdals rctkperiwd
       61 lyaftcgpsk fcnlspkvrl lneyfrllgk gfhhasmrmi edgsftmsnd swrisdinfn
      121 yslcqsypfa llvpksvsdd eiiqasnfra rsrvpavswc npetgavlar ssqplvgimn
      181 trstadeklv aalcaqlsde kdsrrklyia darprknala ngamgggses ssnyfqseiv
      241 ffgidniham resfarfrdy ldthgaassd gmssflrhgg wtwgggnlss msasvstlgd
      301 sgwlihvqsv lagsawiaar valesaavlv hcsdgwdrts qlvslanlml dpyyrtftgf
      361 qalvekdwla fghpfsdrvg mpsisgssfe lsrnasstgs fsssplrqss gssqasnssh
      421 aqnnyspifl qwvdcvsqll riypfafefs snflvdfldc vlscrfgnfl cnsekerqic
      481 gvdescgclw ayladmrsse grshahynlf ydtlkhngpl lppaaalapt lwpqfhlrwa
      541 cpfesqagel eaecrnmaik fselqkakev aemkakeyla ameilnvdlq nekqvsssai
      601 nlakrasken aaiqravqsl gcrvnftnss dstvdvessl metsqrfslp rreseytmeh
      661 ndrsdlsvsi tvvaddvvps ssplgqvcet lcplrtqgrg cqwpdaacaq lgsqfvglka
      721 nfdafdrlsi ydryfkse
//
LOCUS       XP_016707357             499 aa            linear   PLN 06-AUG-2024
DEFINITION  3-phosphoinositide-dependent protein kinase 2 [Gossypium hirsutum].
ACCESSION   XP_016707357
VERSION     XP_016707357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851868.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..499
                     /product="3-phosphoinositide-dependent protein kinase 2"
                     /calculated_mol_wt=55470
     Region          52..321
                     /region_name="STKc_PDK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphoinositide-dependent kinase 1; cd05581"
                     /db_xref="CDD:270733"
     Site            order(60..64,68,81,83,115,131..132,134,138,140,177,179,
                     181..182,184,194..195,198,222..227,254,260,263)
                     /site_type="active"
                     /db_xref="CDD:270733"
     Site            order(60..63,66,68,81,83,102,115,131..134,137..138,
                     181..182,184,194..195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270733"
     Site            order(64,138,140,177,179,181,198,222..227,254,260,263)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270733"
     Site            order(194..204,219..227)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270733"
     Region          396..498
                     /region_name="PH_3"
                     /note="PH domain; pfam14593"
                     /db_xref="CDD:434057"
     CDS             1..499
                     /gene="LOC107922041"
                     /coded_by="XM_016851868.2:390..1889"
                     /db_xref="GeneID:107922041"
ORIGIN      
        1 mlamekdfds klrvqgtddt nkdnssntga snnvqrsksf afrapqenfs iqdfelgkiy
       61 gvgsyskvvr akkkdtgmvy alkimdkkfi tkenktayvk lerivldqle hpgvvrlyft
      121 fqdtfslyma lesceggelf dqitrkgrls edearfyaae vvdaleyihn mglihrdikp
      181 enlllttdgh ikiadfgsvk pmqnsqitvl pnassddkac tfvgtaayvp pevlnsspat
      241 fgndlwalgc tlyqmlsgts pfkdasewli fqriiardir fpnyfseeag dlidrlldld
      301 pskrpgagpd gyatlkmhpf frgidwsslr aqtppklale tgaqssdgdd yndsswnpah
      361 igdgsagqsd givsssssae ssghitrlas idsfdskwqq fldpgesvlm ismvkklqkl
      421 sskkvqlilt dkpkliyvdp sklvvkgnii wsnnsndlsv qvtspshfki ctpkkvlsfd
      481 dakqrawqwk kvieglqnr
//
LOCUS       XP_016707447             598 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707447
VERSION     XP_016707447.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851958.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..598
                     /product="uncharacterized protein"
                     /calculated_mol_wt=66919
     Region          28..84
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          432..522
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..598
                     /gene="LOC107922112"
                     /coded_by="XM_016851958.2:283..2079"
                     /db_xref="GeneID:107922112"
ORIGIN      
        1 mvteswfrnl wkiprrqdgi sekveigvla fevaslmskl vhlwqclsdk qvfrlreeit
       61 nsvgikklvs edeeyigrli caemvenvth vaksvarlak kcsdpglksf elafteliqy
      121 gfdscgwifs lkkmekkvkk merfisvnat lyqemellad leqtlkrmks gdsvqeslle
      181 fhkkviwkqh evkslrassl wnktydytir llarsiftif srikhvfgfe hkvdvgdskv
      241 mdsdfmhrsq svsalmhssv hptentslpr fssgplgifs tksgpipapd ktnyfhsgpl
      301 vgstpksgsi sgknrnfnfh sgplgrtagr sgplfgidki skiwqtnnhs aavsgkkphl
      361 rsnrltqvgp fkgcmvdsga vrncyissng ihsgipngtk dgnlnlpegn avqssssvfr
      421 sqcrlldapp etlgasalal hyanviivie klaasphlig hdaredlynm lpasvraalr
      481 vrlkpyaksl assvydmela gewteamssi lewlaplahn mirwqsersf eqqsfvsrtn
      541 mllvqtlyfa nrekteaait eilvglnyvw rhgrelnvka lqecvgsrms decldlek
//
LOCUS       XP_040942417            2047 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: transcriptional activator DEMETER [Gossypium
            hirsutum].
ACCESSION   XP_040942417
VERSION     XP_040942417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086483.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 8 indels
            internal stop codons :: corrected 2 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2047
                     /product="LOW QUALITY PROTEIN: transcriptional activator
                     DEMETER"
                     /calculated_mol_wt=228416
     Region          <1534..1706
                     /region_name="Nth"
                     /note="Endonuclease III [Replication, recombination and
                     repair]; COG0177"
                     /db_xref="CDD:439947"
     Region          1899..1930
                     /region_name="Perm-CXXC"
                     /note="Permuted single zf-CXXC unit; pfam15629"
                     /db_xref="CDD:434822"
     Region          1933..2034
                     /region_name="RRM_DME"
                     /note="RRM in Demeter; pfam15628"
                     /db_xref="CDD:373977"
     CDS             1..2047
                     /gene="LOC107922077"
                     /coded_by="XM_041086483.1:1..6144"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 8 bases in 6 codons;
                     deleted 2 bases in 2 codons; substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:107922077"
ORIGIN      
        1 mnfgedfsip qgkefeftgs wipvtpqkpi ptgsnpiqvs dqgnqfgken wqefggfptg
       61 yvqdilnnng vahsfnqdqy fgsinlaknn rminniagsy rlvlqnesss wndhtwanll
      121 atrnaadgfa sanriaslgs gntlpipnlh sqednwrrcs shqsssshfm rntdgflqmp
      181 qckwlnlfkt encanfhfts kykymaidfy vsftivvrvh mxrtvcaypa elcnfsllqi
      241 lfikliefnk lymklcksvt mpwktrhdni gstkcaxfss lvnlfiecyf yrgfpipsmp
      301 vcnlnspart evgapshfnt sfqsllatpd qtektrnqnp aadensvsek eqeslivcnk
      361 kqfsqqnrdl lqnivdsssv iisapmeekd sergsvqgid lnktpqqkpp krrkhrpkvi
      421 vegkpkrtpk ptttanvnsk dnpsgkrkyv rrkgltepat qhadptkasd stagtpvkrk
      481 yvhkkslkep adelixilqt nllvmlgxti rvkcmhetnq kepatpqgdc irdsdpspvc
      541 aprscrraln fdlentgngs lagtlnhqem lssksseshs mgfssvgngg fktrfttqsn
      601 qqsglavenl qlqaecshsp flkkmmpidy mslpgitaat asrlqakelm envnvmarna
      661 nmydvdlnqn syrnxgtlph sklsnlfhke etgkilmepr nsclkdtlsq xatvltnsne
      721 grgskrdhyh aieqgqfsta gtmssllsqa ifqadegyrn gysneaafpq alkrrviede
      781 fhaykygmkc svsraagllq tkgtndvnag qftslrdcgt sdpqvrsdni drrkggvfsq
      841 ltgnryvnst agdltsskqn ilsqlhsgie kvgninglal vhnlatienr nlllptxpek
      901 vstprtglvg qtfhtnvsen kkrepglprn vpsrvgkmvq ekkqvsenqq stkargpsak
      961 hvslnpveem inrfkgltle eknnkpkael qnalvlynga gtvvpyegfe sikkkvrprv
     1021 dldpetnrvw nllmgkeged tegtdkekww eeerrvfhgr vdsfiarmhl vqgdrrfskw
     1081 kgsvvdsvig vfltqnvsdh lsssafmsla akfplkssck gdcnaertti lieepevcel
     1141 nsvetikwhe kpfrhqldsq ssmtpnrstd ylrnseysgi ertsfmgtys qsleeevlss
     1201 qgsfdssviq anggirtysg sysetedptm sckflsihgs tldqiensas veefyhcasg
     1261 ssqlhegiky kqsevteegq tsrlertenl kwsssfnqgn nfrnqqfrvq afgasshplh
     1321 mtlesepweg eglepfreec msswastasg lnkpkqpgqn ggkimvqhng qsisqdmatt
     1381 tlntlsgehi mhqkevhtrs nqlcnnhqek rkdfqsesas vtmppstdav tkmqkstsls
     1441 aanthklter psdiermtas akdkatenre vqsnakepmh ssenqlgens slkpkrrkaq
     1501 egkknatdwd qlrkqvqang lkkerskdtm dsldyeamrn anvneisnti kergmnnmla
     1561 erikdflnrl vrdhesidle wlrdxppdka kdyllsirgl glksvecvrl ltlhhlafpv
     1621 dtnvgriavr lgwvplqplp eslqlhllel ypilesiqky lwprlckldq ytlyelhyqm
     1681 itfgkvfctk skpncnacpm rgecrhfasa fasarfalpg peersitsst apmisetnpt
     1741 ravnqiplpp pvhnllkvgp nvgnnepiie epatpepeha egsesdieda cyddpdeipt
     1801 iklnieefta nlqhymqgnm epqegdlska lvalnpnaas iptpklknvs rlrtehcvye
     1861 lpdkhpllkq mekrepddps pyllaiwtpg etansiqppe qscgsqepgr lcnektcfac
     1921 nsvreantet vrgtilipcr tamrgsfpln gtyfqvnevf adhdsslnpv dvprewiwnl
     1981 prrtvyfgts vssifkglst egiqycfwkg fvcvrgfdqk traprplmar lhfpasklak
     2041 mktennk
//
LOCUS       XP_016707776             650 aa            linear   PLN 06-AUG-2024
DEFINITION  neutral/alkaline invertase 3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707776
VERSION     XP_016707776.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852287.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707776.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="neutral/alkaline invertase 3, chloroplastic"
                     /calculated_mol_wt=72429
     Region          1..650
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; cl17340"
                     /db_xref="CDD:450179"
     CDS             1..650
                     /gene="LOC107922308"
                     /coded_by="XM_016852287.2:194..2146"
                     /db_xref="GeneID:107922308"
ORIGIN      
        1 mgtseavlhv lsgavpqfls sdmcssnsdl vfyskchiks vkkkgsrrlp slkcssmsgc
       61 qigsyrckrl ggglhgntai drltllrckc qqaesasgvd tgegngawfv dnakklnlng
      121 smnsedilef ktveqlkren evsmsngkvg tgtntiftgg vdsvedeawe llrasmvyyc
      181 gspvgtiaan dptssnvlny dqvfirdfip sgiafllkge ydivrnfilh tlqlqswekt
      241 mdchspgqgl mpasfkvrtv pldgddsate evldpdfgea aigrvapvds glwwiillra
      301 ygkcsddlsv qervdvqtgi kmilrlclad gfdmfptllv tdgscmidrr mgihghplei
      361 qalfysallc aremltpgdg sadliralnn rlvalsfhir eyywidmrkl neiyryktee
      421 ysydavnkfn iypdqispwl vewmpnkggy lignlqpahm dfrffslgnl wavvsglati
      481 dqshaildli eakwadlvae mpfkicypal egqewqiitg cdpkntpwsy hnagswptll
      541 wqltvacmkm nrpelaakav svaekriskd kwpeyydtkk arfigkqsrl fqtwsiagfl
      601 vakllladpn aakiltteed telvnafscm isanprrkrg pkrskqtyiv
//
LOCUS       XP_016707773             650 aa            linear   PLN 06-AUG-2024
DEFINITION  neutral/alkaline invertase 3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707773
VERSION     XP_016707773.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852284.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707773.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="neutral/alkaline invertase 3, chloroplastic"
                     /calculated_mol_wt=72429
     Region          1..650
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; cl17340"
                     /db_xref="CDD:450179"
     CDS             1..650
                     /gene="LOC107922308"
                     /coded_by="XM_016852284.2:226..2178"
                     /db_xref="GeneID:107922308"
ORIGIN      
        1 mgtseavlhv lsgavpqfls sdmcssnsdl vfyskchiks vkkkgsrrlp slkcssmsgc
       61 qigsyrckrl ggglhgntai drltllrckc qqaesasgvd tgegngawfv dnakklnlng
      121 smnsedilef ktveqlkren evsmsngkvg tgtntiftgg vdsvedeawe llrasmvyyc
      181 gspvgtiaan dptssnvlny dqvfirdfip sgiafllkge ydivrnfilh tlqlqswekt
      241 mdchspgqgl mpasfkvrtv pldgddsate evldpdfgea aigrvapvds glwwiillra
      301 ygkcsddlsv qervdvqtgi kmilrlclad gfdmfptllv tdgscmidrr mgihghplei
      361 qalfysallc aremltpgdg sadliralnn rlvalsfhir eyywidmrkl neiyryktee
      421 ysydavnkfn iypdqispwl vewmpnkggy lignlqpahm dfrffslgnl wavvsglati
      481 dqshaildli eakwadlvae mpfkicypal egqewqiitg cdpkntpwsy hnagswptll
      541 wqltvacmkm nrpelaakav svaekriskd kwpeyydtkk arfigkqsrl fqtwsiagfl
      601 vakllladpn aakiltteed telvnafscm isanprrkrg pkrskqtyiv
//
LOCUS       XP_016707774             650 aa            linear   PLN 06-AUG-2024
DEFINITION  neutral/alkaline invertase 3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707774
VERSION     XP_016707774.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852285.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707774.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="neutral/alkaline invertase 3, chloroplastic"
                     /calculated_mol_wt=72429
     Region          1..650
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; cl17340"
                     /db_xref="CDD:450179"
     CDS             1..650
                     /gene="LOC107922308"
                     /coded_by="XM_016852285.2:205..2157"
                     /db_xref="GeneID:107922308"
ORIGIN      
        1 mgtseavlhv lsgavpqfls sdmcssnsdl vfyskchiks vkkkgsrrlp slkcssmsgc
       61 qigsyrckrl ggglhgntai drltllrckc qqaesasgvd tgegngawfv dnakklnlng
      121 smnsedilef ktveqlkren evsmsngkvg tgtntiftgg vdsvedeawe llrasmvyyc
      181 gspvgtiaan dptssnvlny dqvfirdfip sgiafllkge ydivrnfilh tlqlqswekt
      241 mdchspgqgl mpasfkvrtv pldgddsate evldpdfgea aigrvapvds glwwiillra
      301 ygkcsddlsv qervdvqtgi kmilrlclad gfdmfptllv tdgscmidrr mgihghplei
      361 qalfysallc aremltpgdg sadliralnn rlvalsfhir eyywidmrkl neiyryktee
      421 ysydavnkfn iypdqispwl vewmpnkggy lignlqpahm dfrffslgnl wavvsglati
      481 dqshaildli eakwadlvae mpfkicypal egqewqiitg cdpkntpwsy hnagswptll
      541 wqltvacmkm nrpelaakav svaekriskd kwpeyydtkk arfigkqsrl fqtwsiagfl
      601 vakllladpn aakiltteed telvnafscm isanprrkrg pkrskqtyiv
//
LOCUS       XP_016707695             744 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707695
VERSION     XP_016707695.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852206.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707695.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..744
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=83862
     Region          <477..578
                     /region_name="EPL1"
                     /note="Enhancer of polycomb-like; pfam10513"
                     /db_xref="CDD:463128"
     CDS             1..744
                     /gene="LOC107922267"
                     /coded_by="XM_016852206.2:537..2771"
                     /db_xref="GeneID:107922267"
ORIGIN      
        1 mpsvgmrrtt rvfrmvksse alvlrsgrrl wpdsvevepk sgvnkaisev ngnpkilvne
       61 eipkkqsrkk kaeavnddat ddrrfgvvys rkrkrngvpn cqlslnseqk kcgkkfhrrr
      121 vikktnndvk esrmfafvvg nggyhgwfsn llwlvlgylk ranvrfsgla aflmsqplss
      181 vyasngvhll rglpanrsgi ckfygdrgfi plfyvdfsav pysfmymhyg mllcsrrmql
      241 vlvntdeifs aceedkpclt svvdfskrls gsnvvkvdnf gskgvsdras klkeigrngh
      301 ykhglsriiq rrrssmrrrr arspwllgih kasgapmsdl sssrrksipf ssvvsrnklr
      361 csvrnssanl advsssisnl mqgadslqcs anilvtepdr cyreegaiva lelsasrewl
      421 lvvekdgstk ytykvdrair psscnrftha iiwtgddnwk lefvnrqdwv ifkdlykecs
      481 ernapsstak mipvpgvcev sgyedrafvp fqrpdfyitl dgdevsrala krtanydmds
      541 edeewlknfn naffsgngnc ehlsedcfel mvdafekeay frtpddhsdd kgatnlcldl
      601 asgevveavh aywlrkrkrr sallrvfqgh kvkkspvvpk pvlrkrrlgk rqassgrgkq
      661 psllqamaae hhplgeenam vkveearasa arsvelailk rqqaqllmqn admatykavm
      721 alriaeaarf ikssdvsvaq lfdp
//
LOCUS       XP_016707696             693 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707696
VERSION     XP_016707696.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852207.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707696.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..693
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=78493
     Region          <426..527
                     /region_name="EPL1"
                     /note="Enhancer of polycomb-like; pfam10513"
                     /db_xref="CDD:463128"
     CDS             1..693
                     /gene="LOC107922267"
                     /coded_by="XM_016852207.2:490..2571"
                     /db_xref="GeneID:107922267"
ORIGIN      
        1 mpsvgmrrtt rvfrmvksse alvlrsgrrl wpdsvevepk sgvnkaisev ngnpkilvne
       61 eipkkqsrkk kaeavnddat ddrrfgvvys rkrkrngvpn cqlslnseqk kcgkkfhrrr
      121 vikktnndvk esrmfafvvg nggyhgwfsn llwlvlgylk ranvrfsgla aflmsqplss
      181 vyasngvhll rglpanrsgi ckfygdrgfi plfyvdfsav pysfmymhyg mllcsrrmql
      241 vlvntdeifs aceedkpclt svvdfskrls gsnvvkvdnf gskgvsdras klkeigrngh
      301 ykhglsriiq rrrssmrrrr arspwllgih kgadslqcsa nilvtepdrc yreegaival
      361 elsasrewll vvekdgstky tykvdrairp sscnrfthai iwtgddnwkl efvnrqdwvi
      421 fkdlykecse rnapsstakm ipvpgvcevs gyedrafvpf qrpdfyitld gdevsralak
      481 rtanydmdse deewlknfnn affsgngnce hlsedcfelm vdafekeayf rtpddhsddk
      541 gatnlcldla sgevveavha ywlrkrkrrs allrvfqghk vkkspvvpkp vlrkrrlgkr
      601 qassgrgkqp sllqamaaeh hplgeenamv kveearasaa rsvelailkr qqaqllmqna
      661 dmatykavma lriaeaarfi kssdvsvaql fdp
//
LOCUS       XP_040942418             560 aa            linear   PLN 06-AUG-2024
DEFINITION  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942418
VERSION     XP_040942418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086484.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..560
                     /product="3-hydroxy-3-methylglutaryl-coenzyme A reductase
                     1"
                     /calculated_mol_wt=60274
     Region          147..550
                     /region_name="HMG-CoA_reductase_classI"
                     /note="Class I hydroxymethylglutaryl-coenzyme A (HMG-CoA)
                     reductase (HMGR); cd00643"
                     /db_xref="CDD:153081"
     Site            order(188..189,191..192,197,202,205..220,232,237..244,260,
                     262,264,275,283,315,318,320..322,324,361,363..367,369,
                     371..376,378..380,387,389,391,410..411,413..422,428..431,
                     434..435,438,442..443,447..449,451..452,460,462,471,473,
                     475,487,492..493,495..496,498..499,536)
                     /site_type="other"
                     /note="tetramerization interface [polypeptide binding]"
                     /db_xref="CDD:153081"
     Site            order(239,241..242,244..245,247..248,251,402,432,435,
                     531..532,535,541,544..545,548)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:153081"
     Site            order(239,371,447,545)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:153081"
     Site            order(239,242,245,415,431..432,435,532,536)
                     /site_type="active"
                     /note="inhibitor binding sites [active]"
                     /db_xref="CDD:153081"
     Site            order(270,306..308,331..339,341,370..371,447,484..486)
                     /site_type="other"
                     /note="NADP(H) binding site [chemical binding]"
                     /db_xref="CDD:153081"
     CDS             1..560
                     /gene="LOC107921012"
                     /coded_by="XM_041086484.1:206..1888"
                     /db_xref="GeneID:107921012"
ORIGIN      
        1 mdvrrrpska lrpapkepss vpeptgakas dalplplyft nalfftlffs vayylllrwr
       61 dkirnsvplh vvtfselaai lsliasfiyl lgffgidfvq sfiarasnea wdlvdeeege
      121 dhrhrlmdcs psmadhiipa vssaedeeiv dlvvkgtips yaleeqlgdc kravrirrea
      181 lqritrrslq glpldgfdyg silkqccemp vgyvqipvgv agpllldsfe yivpmatteg
      241 civastnrgf kgiyasggat stilrdgmtr apvvrfpsas rachlkffld npsnfqtlad
      301 efnkssnfar lqgvqcsiag knlyirfsct tgdamgmnmv skgvenvlay lrneypdmdi
      361 isisgnfcsd kkpaainwie grgksavcea vikeevlkkv frtsvatlve lnmlknlags
      421 avagalggfn ahasnivsai fiatgqdpaq nvesshcitm meavndgkdl hisvtmpsie
      481 vgtigggtql asqsacldll gvkgaskela gansrllaki vagsvlagel slmaaiasgq
      541 lvqshmkynr stkdvskvgs
//
LOCUS       XP_016708073             735 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708073
VERSION     XP_016708073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852584.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..735
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=82150
     Region          697..>726
                     /region_name="Rho_N"
                     /note="Rho termination factor, N-terminal domain; cl06505"
                     /db_xref="CDD:447016"
     CDS             1..735
                     /gene="LOC107922510"
                     /coded_by="XM_016852584.2:257..2464"
                     /db_xref="GeneID:107922510"
ORIGIN      
        1 mafelwgtsf teeenssfiq tewqydlyfg ygidmieena lneksciqvl riliakadte
       61 idelekdlvl lqselvwaeh eewhdiccna lrakincldi sirklrnkde ndievyllmh
      121 tepveklhei mkallksfcn ekheqdvvpd srsssleqsa alyknqklns sdscfiakee
      181 nngpnvtpke nftssnrsme levkkansse tlanadvkdl mphfllpaag qfdeksiitl
      241 ldlettkklk esgcalkdkn vvrhfslksa qkrknnpyrt kvkdvaaqcv ndsdldaskh
      301 sagrlkkkkk tsssslkils eeatkhtsis aadmlildss snsmgmtgdl tkkvkeeqta
      361 diiandlgli ahkqmtgdsn emktlgkhdv kingcevqgq dtsnflnscl npehegniqk
      421 adkveslkfd mdqklcdfav ksarkqrike skvasmdknq hsnsllkgee krndtlqdvm
      481 pkeaspsdne hsaltslvel qdengedkti qlmeeksqme evpmsevvss dgklvtnlym
      541 rlqrgkvktv kpnmestaad aeesglnsme nlsnsspfpk gkrtwknann cslnysltgk
      601 iikktvqhsq ceaeetslml dasqntmplp qkkckklssv pivvefrass vqmnisklhg
      661 dlnksnivkt efaesgalvd dlgakgvvpr pldanslmkm klrdlraiak sqklkkystm
      721 kkedlvkrle nglsc
//
LOCUS       XP_016708074             735 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708074
VERSION     XP_016708074.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852585.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..735
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=82150
     Region          697..>726
                     /region_name="Rho_N"
                     /note="Rho termination factor, N-terminal domain; cl06505"
                     /db_xref="CDD:447016"
     CDS             1..735
                     /gene="LOC107922510"
                     /coded_by="XM_016852585.2:367..2574"
                     /db_xref="GeneID:107922510"
ORIGIN      
        1 mafelwgtsf teeenssfiq tewqydlyfg ygidmieena lneksciqvl riliakadte
       61 idelekdlvl lqselvwaeh eewhdiccna lrakincldi sirklrnkde ndievyllmh
      121 tepveklhei mkallksfcn ekheqdvvpd srsssleqsa alyknqklns sdscfiakee
      181 nngpnvtpke nftssnrsme levkkansse tlanadvkdl mphfllpaag qfdeksiitl
      241 ldlettkklk esgcalkdkn vvrhfslksa qkrknnpyrt kvkdvaaqcv ndsdldaskh
      301 sagrlkkkkk tsssslkils eeatkhtsis aadmlildss snsmgmtgdl tkkvkeeqta
      361 diiandlgli ahkqmtgdsn emktlgkhdv kingcevqgq dtsnflnscl npehegniqk
      421 adkveslkfd mdqklcdfav ksarkqrike skvasmdknq hsnsllkgee krndtlqdvm
      481 pkeaspsdne hsaltslvel qdengedkti qlmeeksqme evpmsevvss dgklvtnlym
      541 rlqrgkvktv kpnmestaad aeesglnsme nlsnsspfpk gkrtwknann cslnysltgk
      601 iikktvqhsq ceaeetslml dasqntmplp qkkckklssv pivvefrass vqmnisklhg
      661 dlnksnivkt efaesgalvd dlgakgvvpr pldanslmkm klrdlraiak sqklkkystm
      721 kkedlvkrle nglsc
//
LOCUS       XP_016708075             701 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708075
VERSION     XP_016708075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852586.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..701
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=78062
     Region          663..>692
                     /region_name="Rho_N"
                     /note="Rho termination factor, N-terminal domain; cl06505"
                     /db_xref="CDD:447016"
     CDS             1..701
                     /gene="LOC107922510"
                     /coded_by="XM_016852586.2:128..2233"
                     /db_xref="GeneID:107922510"
ORIGIN      
        1 mieenalnek sciqvlrili akadteidel ekdlvllqse lvwaeheewh diccnalrak
       61 incldisirk lrnkdendie vyllmhtepv eklheimkal lksfcnekhe qdvvpdsrss
      121 sleqsaalyk nqklnssdsc fiakeenngp nvtpkenfts snrsmelevk kanssetlan
      181 advkdlmphf llpaagqfde ksiitlldle ttkklkesgc alkdknvvrh fslksaqkrk
      241 nnpyrtkvkd vaaqcvndsd ldaskhsagr lkkkkktsss slkilseeat khtsisaadm
      301 lildsssnsm gmtgdltkkv keeqtadiia ndlgliahkq mtgdsnemkt lgkhdvking
      361 cevqgqdtsn flnsclnpeh egniqkadkv eslkfdmdqk lcdfavksar kqrikeskva
      421 smdknqhsns llkgeekrnd tlqdvmpkea spsdnehsal tslvelqden gedktiqlme
      481 eksqmeevpm sevvssdgkl vtnlymrlqr gkvktvkpnm estaadaees glnsmenlsn
      541 sspfpkgkrt wknanncsln ysltgkiikk tvqhsqceae etslmldasq ntmplpqkkc
      601 kklssvpivv efrassvqmn isklhgdlnk snivktefae sgalvddlga kgvvprplda
      661 nslmkmklrd lraiaksqkl kkystmkked lvkrlengls c
//
LOCUS       XP_016706271             313 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-URONIC ACID TRANSPORTER 1 [Gossypium hirsutum].
ACCESSION   XP_016706271
VERSION     XP_016706271.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850782.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..313
                     /product="UDP-URONIC ACID TRANSPORTER 1"
                     /calculated_mol_wt=34092
     Region          14..306
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; cl26744"
                     /db_xref="CDD:474852"
     CDS             1..313
                     /gene="LOC107920952"
                     /coded_by="XM_016850782.2:166..1107"
                     /db_xref="GeneID:107920952"
ORIGIN      
        1 msstqqpssk kqtlfiasli ilwyssnigv lllnkyllsn ygfkfpiflt mchmsacaff
       61 syisivfikl vplqpiksrp qflkiatlsv vfccsvvggn islrylpvsf nqavgattpf
      121 ftalfaylmt fkreawvtya alvpvvtgvv vasggepgfh cfgfimcisa taarafksvl
      181 qgillssege tlnsmnllly mspiavlvlv ptalvmepnv leviislgrq hrymwlllfi
      241 nstlaysanl snflvtkhts altlqvlgna kgavavvisi llfrnpvttv giggymmtvl
      301 gvvaygeakr rfr
//
LOCUS       XP_040942419             312 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor IIB-2 [Gossypium hirsutum].
ACCESSION   XP_040942419
VERSION     XP_040942419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086485.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..312
                     /product="transcription initiation factor IIB-2"
                     /calculated_mol_wt=33894
     Region          6..288
                     /region_name="SUA7"
                     /note="Transcription initiation factor TFIIIB, Brf1
                     subunit/Transcription initiation factor TFIIB
                     [Transcription]; COG1405"
                     /db_xref="CDD:441015"
     CDS             1..312
                     /gene="LOC107922540"
                     /coded_by="XM_041086485.1:816..1754"
                     /db_xref="GeneID:107922540"
ORIGIN      
        1 madafcsdck rntevvfdhs agdtvcsecg lvleshside tsewrtfane sgdndpvrvg
       61 gptnplladg glstviakpn gasgeflsss lgrwqnrgsn pdrglilafk tiatmsdrlg
      121 lvatikdran eiykkvedqk ssrgrnqdal laaclyiacr qedkprtvke icsvangatk
      181 keigrakeyi vkqlgletgq svemgaihag dfmrrfcsnl gmnnqavkaa qeavqkseef
      241 dirrspisia aaviyiitql sddkkplkdi svatgvaegt irnsykdlyp hvskiipnwy
      301 akeedlknlc sp
//
LOCUS       XP_016707399            1885 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter A family member 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707399
VERSION     XP_016707399.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851910.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707399.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1885
                     /product="ABC transporter A family member 1 isoform X1"
                     /calculated_mol_wt=209763
     Region          <259..1688
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1885
                     /gene="LOC107922075"
                     /coded_by="XM_016851910.2:232..5889"
                     /db_xref="GeneID:107922075"
ORIGIN      
        1 mgtskrqlka mlrknwllki rhpfitaaei llptivilll igirtrvdtq ihpaqpyirk
       61 dmfveigkgi spnfqqvlel llakreciaf apdteqtrqm vnlisikfpl lqlvskiynd
      121 eleldtyiqs dlygtcdfrn csnpkikgav vfhnqgpqlf dysirlnhtw afsgfpdvks
      181 imdtngpyln dlelgvniip tmqysfsgfl tlqqvldsfi ifaaqqtesg iasqdieira
      241 lrstgvtssl glpwtqfsps niriapfptr eytddefqsi iksvlgllyl lgflypisrl
      301 isytvfekeq kireglymmg lkdgifhlsw lityafqfai ssviitvctm dnlfkysdkt
      361 vvfvyffvfg lsaimlsfli stfftrtkta vavgtlsflg affpyytvnd eavamvlkvi
      421 asflsptafa lgsinfadye rahvglrwsn iwrgssgvnf lvcllmmlfd tllycvvgly
      481 ldkvlpseng vrypwnfmfq kcfwkkrsai khhvssyevr vndtiskrkn ifprkdmcgp
      541 aveaislemk qqeidgrciq ikdlhkvyat kkgkccavns lqltlyenqi lallghngag
      601 ksttismlvg llpptsgdal vlgksiltdm keirkglgvc pqhdilfpel tvrehlemfa
      661 ilkgvkedgl esavtemvde vgladklntv vralsggmkr klslgialig nskviildep
      721 tsgmdpysmr ltwqlikkik kgriilltth smdeadelgd riaimadgsl kccgsslflk
      781 hqygvgytlt lvkgaptasi aadivyryvp satcvsevgt eisfklplaa ssvfesmfre
      841 iescigrsvs nsetsisedk nyfgiesygi svttleevfl rvagcdfdea esvqegnnfv
      901 sidsipsgeq vpkrlsyakl sgsykkiieg issivtrfcg lfvsiflsfm hflsmqccsc
      961 cmisrsifwq hskallikra vsarrdrkti vfqllipvif llfgllflkl kphpeqqsvt
     1021 fttslfnpll sgsggggpip fdlswpiake vaknveggwi qkfkptsykf pdseralada
     1081 veaagptlgp vllsmseflm ssfnesyqsr ygavvmdeqy ddgslgytvl hnsscqhaap
     1141 tfinlmnsai lrlatsdknm tirarnhplp mtksqrlqhh dldafsaaii vniafsfipa
     1201 sfavplvkeq evkakhqqli sgvsvisywv styiwdfisf lfpstfaivl fyvfgldqfi
     1261 grgflptvim fleyglaias stycltfffs dhsmaqnvvl lihfftglil mvisfimgli
     1321 kttatansfl knffrlspgf cfadglasla llrqgmkdks sdgifdwnvt gasicylgie
     1381 aigyffltlg lellptcklt parlmewwrk kpfqgddsvl epflkssset svhldedidv
     1441 rternrvlsg sidntilflr nlqkvypggn hhrakvavds ltfsvqagec fgflgtngag
     1501 ktttlsmltg eesptegtaf ifgkdissnp kaarrhigyc pqfdalleyl tvqehlelya
     1561 rikgvldyrm ndvvleklve fdllkhadkp sytlsggnkr klsvaiamig dppivildep
     1621 stgmdpiakr fmwevisrls trqgktavil tthsmneaqa lctrigimvg grlrcigspq
     1681 hlktrfgnhl eleikptevs asdlenlcri iqemlfdips hprsllndle vcigaigsit
     1741 sgnasvaeis lskemiivvg rwlgneervk tlissrsnsd glfgeqlseq lvreggiplp
     1801 ifsewwlare kfsaidsfil ssfpgatfhg cnglsvkyql pyreglslad vfghlernrn
     1861 gsgmaeysis qstletifnh fasns
//
LOCUS       XP_040942420            1864 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter A family member 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942420
VERSION     XP_040942420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086486.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1864
                     /product="ABC transporter A family member 1 isoform X2"
                     /calculated_mol_wt=207388
     Region          <259..1667
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1864
                     /gene="LOC107922075"
                     /coded_by="XM_041086486.1:232..5826"
                     /db_xref="GeneID:107922075"
ORIGIN      
        1 mgtskrqlka mlrknwllki rhpfitaaei llptivilll igirtrvdtq ihpaqpyirk
       61 dmfveigkgi spnfqqvlel llakreciaf apdteqtrqm vnlisikfpl lqlvskiynd
      121 eleldtyiqs dlygtcdfrn csnpkikgav vfhnqgpqlf dysirlnhtw afsgfpdvks
      181 imdtngpyln dlelgvniip tmqysfsgfl tlqqvldsfi ifaaqqtesg iasqdieira
      241 lrstgvtssl glpwtqfsps niriapfptr eytddefqsi iksvlgllyl lgflypisrl
      301 isytvfekeq kireglymmg lkdgifhlsw lityafqfai ssviitvctm dnlfkysdkt
      361 vvfvyffvfg lsaimlsfli stfftrtkta vavgtlsflg affpyytvnd eavamvlkvi
      421 asflsptafa lgsinfadye rahvglrwsn iwrgssgvnf lvcllmmlfd tllycvvgly
      481 ldkvlpseng vrypwnfmfq kcfwkkrsai khhvssyevr vndtiskrkn ifprkdmcgp
      541 aveaislemk qqeidgrciq ikdlhkvyat kkgkccavns lqltlyenqi lallghngag
      601 ksttismlvg llpptsgdal vlgksiltdm vrehlemfai lkgvkedgle savtemvdev
      661 gladklntvv ralsggmkrk lslgialign skviildept sgmdpysmrl twqlikkikk
      721 griilltths mdeadelgdr iaimadgslk ccgsslflkh qygvgytltl vkgaptasia
      781 adivyryvps atcvsevgte isfklplaas svfesmfrei escigrsvsn setsisedkn
      841 yfgiesygis vttleevflr vagcdfdeae svqegnnfvs idsipsgeqv pkrlsyakls
      901 gsykkiiegi ssivtrfcgl fvsiflsfmh flsmqccscc misrsifwqh skallikrav
      961 sarrdrktiv fqllipvifl lfgllflklk phpeqqsvtf ttslfnplls gsggggpipf
     1021 dlswpiakev aknveggwiq kfkptsykfp dseraladav eaagptlgpv llsmseflms
     1081 sfnesyqsry gavvmdeqyd dgslgytvlh nsscqhaapt finlmnsail rlatsdknmt
     1141 irarnhplpm tksqrlqhhd ldafsaaiiv niafsfipas favplvkeqe vkakhqqlis
     1201 gvsvisywvs tyiwdfisfl fpstfaivlf yvfgldqfig rgflptvimf leyglaiass
     1261 tycltfffsd hsmaqnvvll ihfftglilm visfimglik ttatansflk nffrlspgfc
     1321 fadglaslal lrqgmkdkss dgifdwnvtg asicylgiea igyffltlgl ellptckltp
     1381 arlmewwrkk pfqgddsvle pflksssets vhldedidvr ternrvlsgs idntilflrn
     1441 lqkvypggnh hrakvavdsl tfsvqagecf gflgtngagk tttlsmltge esptegtafi
     1501 fgkdissnpk aarrhigycp qfdalleylt vqehlelyar ikgvldyrmn dvvleklvef
     1561 dllkhadkps ytlsggnkrk lsvaiamigd ppivildeps tgmdpiakrf mwevisrlst
     1621 rqgktavilt thsmneaqal ctrigimvgg rlrcigspqh lktrfgnhle leikptevsa
     1681 sdlenlcrii qemlfdipsh prsllndlev cigaigsits gnasvaeisl skemiivvgr
     1741 wlgneervkt lissrsnsdg lfgeqlseql vreggiplpi fsewwlarek fsaidsfils
     1801 sfpgatfhgc nglsvkyqlp yreglsladv fghlernrng sgmaeysisq stletifnhf
     1861 asns
//
LOCUS       XP_040942421             114 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 35B [Gossypium
            hirsutum].
ACCESSION   XP_040942421
VERSION     XP_040942421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086487.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="vacuolar protein sorting-associated protein 35B"
                     /calculated_mol_wt=12552
     Region          <7..114
                     /region_name="Vps35"
                     /note="Vacuolar protein sorting-associated protein 35;
                     pfam03635"
                     /db_xref="CDD:427414"
     CDS             1..114
                     /gene="LOC107920975"
                     /coded_by="XM_041086487.1:1210..1554"
                     /db_xref="GeneID:107920975"
ORIGIN      
        1 mgqlckiies lsavpspela lrlylqcaea angcdiehva yefftqafvl yeeeiadska
       61 qvtaihliig tlqrmnvfgv enrdtlthka tgysarllkk adqcravyac shlf
//
LOCUS       XP_016706508             925 aa            linear   PLN 06-AUG-2024
DEFINITION  villin-2 [Gossypium hirsutum].
ACCESSION   XP_016706508
VERSION     XP_016706508.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851019.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..925
                     /product="villin-2"
                     /calculated_mol_wt=102160
     Region          11..123
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(28..29,68,74..75,77..79,81..83,85..86,97,99)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          137..231
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          253..342
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(337,342)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     Region          384..485
                     /region_name="gelsolin_S4_like"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11293"
                     /db_xref="CDD:200449"
     Site            order(400..401,440,446..447,449..451,453..455,457..458,
                     469,471)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200449"
     Site            476
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200449"
     Region          516..608
                     /region_name="gelsolin_S5_like"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11288"
                     /db_xref="CDD:200444"
     Site            524
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200444"
     Region          622..721
                     /region_name="gelsolin_S6_like"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11291"
                     /db_xref="CDD:200447"
     Region          890..925
                     /region_name="VHP"
                     /note="Villin headpiece domain; pfam02209"
                     /db_xref="CDD:460493"
     CDS             1..925
                     /gene="LOC107921145"
                     /coded_by="XM_016851019.2:283..3060"
                     /db_xref="GeneID:107921145"
ORIGIN      
        1 mssskvldpa fqgvgqkpgt eiwrienfqp vplqksdygk fymgdsyivl htihskagsh
       61 mydihfwigk dtsqdeagaa aiktveldaa lggravqhre lqghesdkfl syfkpcivpl
      121 eggvasgfkt peeevfetrl yickgkrvvk lkqipfarss lnhddvfild tenkiyqfng
      181 ansniqerak aleiiqflke kyhggvcnva ivddgkldte sdsgefwvlf ggfaplgkka
      241 sseddvipes tpaklysite gevkpiegel sksmlenskc ylldcgaeif vwigratqve
      301 erkvatqsae dfvashnrpr atritrliqg yetssfksnf dswpaasatp ggddgrgkva
      361 allkqqkvav kgltktapvq eevplleggg kmevwcidds aktplpkedi gkfcsgdcyi
      421 vlytyhsger kedyflccwi gkdsneedqk iaaelantvf nshkgrpvqg rvyegkeppq
      481 fvalfqpmvv lkggisagyr ksieekgltd etytadsval fqisgnsmhn ikaqqvdava
      541 tslnstecfl lqsgssaift wygtqstheq qhlapkvaef lkpgvtrkhc kegtetsafw
      601 salggkqdyt stekesneiv rdphlytfyl nkgkfkveev ynfdqddllt edilildtra
      661 evfvwvgqcv dakekqqafe fgqkyidrav slegmspkit lykvtegnep cffttffswd
      721 shraivpgns fqkkvallfg ashaedrsdg qgprqraeal aaltsafnps pegktsapkp
      781 vctgqgsqra aavaalsqvl taemkkspdg sprksasstp avtsptyeak seadpsgahd
      841 shetaegetg etngdnsepi tqsftysydq lksksenpvt gidfkrrety lsdeefetvf
      901 gmpkeafykl pkwkqdlqkk evdlf
//
LOCUS       XP_040942423             925 aa            linear   PLN 06-AUG-2024
DEFINITION  villin-2 [Gossypium hirsutum].
ACCESSION   XP_040942423
VERSION     XP_040942423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086489.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..925
                     /product="villin-2"
                     /calculated_mol_wt=102160
     Region          11..123
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(28..29,68,74..75,77..79,81..83,85..86,97,99)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          137..231
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          253..342
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(337,342)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     Region          384..485
                     /region_name="gelsolin_S4_like"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11293"
                     /db_xref="CDD:200449"
     Site            order(400..401,440,446..447,449..451,453..455,457..458,
                     469,471)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200449"
     Site            476
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200449"
     Region          516..608
                     /region_name="gelsolin_S5_like"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11288"
                     /db_xref="CDD:200444"
     Site            524
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200444"
     Region          622..721
                     /region_name="gelsolin_S6_like"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11291"
                     /db_xref="CDD:200447"
     Region          890..925
                     /region_name="VHP"
                     /note="Villin headpiece domain; pfam02209"
                     /db_xref="CDD:460493"
     CDS             1..925
                     /gene="LOC107921145"
                     /coded_by="XM_041086489.1:273..3050"
                     /db_xref="GeneID:107921145"
ORIGIN      
        1 mssskvldpa fqgvgqkpgt eiwrienfqp vplqksdygk fymgdsyivl htihskagsh
       61 mydihfwigk dtsqdeagaa aiktveldaa lggravqhre lqghesdkfl syfkpcivpl
      121 eggvasgfkt peeevfetrl yickgkrvvk lkqipfarss lnhddvfild tenkiyqfng
      181 ansniqerak aleiiqflke kyhggvcnva ivddgkldte sdsgefwvlf ggfaplgkka
      241 sseddvipes tpaklysite gevkpiegel sksmlenskc ylldcgaeif vwigratqve
      301 erkvatqsae dfvashnrpr atritrliqg yetssfksnf dswpaasatp ggddgrgkva
      361 allkqqkvav kgltktapvq eevplleggg kmevwcidds aktplpkedi gkfcsgdcyi
      421 vlytyhsger kedyflccwi gkdsneedqk iaaelantvf nshkgrpvqg rvyegkeppq
      481 fvalfqpmvv lkggisagyr ksieekgltd etytadsval fqisgnsmhn ikaqqvdava
      541 tslnstecfl lqsgssaift wygtqstheq qhlapkvaef lkpgvtrkhc kegtetsafw
      601 salggkqdyt stekesneiv rdphlytfyl nkgkfkveev ynfdqddllt edilildtra
      661 evfvwvgqcv dakekqqafe fgqkyidrav slegmspkit lykvtegnep cffttffswd
      721 shraivpgns fqkkvallfg ashaedrsdg qgprqraeal aaltsafnps pegktsapkp
      781 vctgqgsqra aavaalsqvl taemkkspdg sprksasstp avtsptyeak seadpsgahd
      841 shetaegetg etngdnsepi tqsftysydq lksksenpvt gidfkrrety lsdeefetvf
      901 gmpkeafykl pkwkqdlqkk evdlf
//
LOCUS       XP_040942424             106 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942424
VERSION     XP_040942424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086490.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="ATP-dependent RNA helicase DBP3 isoform X1"
                     /calculated_mol_wt=12344
     Region          <1..49
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..106
                     /gene="LOC107921087"
                     /coded_by="XM_041086490.1:232..552"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkii fvegrsdqit
       61 kshypedsfv dfvnilvvwh virqmimflm fpsyvwcfgm fdvvew
//
LOCUS       XP_040942425             106 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942425
VERSION     XP_040942425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086491.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="ATP-dependent RNA helicase DBP3 isoform X1"
                     /calculated_mol_wt=12344
     Region          <1..49
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..106
                     /gene="LOC107921087"
                     /coded_by="XM_041086491.1:185..505"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkii fvegrsdqit
       61 kshypedsfv dfvnilvvwh virqmimflm fpsyvwcfgm fdvvew
//
LOCUS       XP_040942426             106 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942426
VERSION     XP_040942426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086492.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="ATP-dependent RNA helicase DBP3 isoform X1"
                     /calculated_mol_wt=12344
     Region          <1..49
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..106
                     /gene="LOC107921087"
                     /coded_by="XM_041086492.1:178..498"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkii fvegrsdqit
       61 kshypedsfv dfvnilvvwh virqmimflm fpsyvwcfgm fdvvew
//
LOCUS       XP_040942427             106 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942427
VERSION     XP_040942427.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086493.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="ATP-dependent RNA helicase DBP3 isoform X1"
                     /calculated_mol_wt=12344
     Region          <1..49
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..106
                     /gene="LOC107921087"
                     /coded_by="XM_041086493.1:217..537"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkii fvegrsdqit
       61 kshypedsfv dfvnilvvwh virqmimflm fpsyvwcfgm fdvvew
//
LOCUS       XP_040942428             106 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942428
VERSION     XP_040942428.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086494.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="ATP-dependent RNA helicase DBP3 isoform X1"
                     /calculated_mol_wt=12344
     Region          <1..49
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..106
                     /gene="LOC107921087"
                     /coded_by="XM_041086494.1:224..544"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkii fvegrsdqit
       61 kshypedsfv dfvnilvvwh virqmimflm fpsyvwcfgm fdvvew
//
LOCUS       XP_016706440             106 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase DBP3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706440
VERSION     XP_016706440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850951.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="ATP-dependent RNA helicase DBP3 isoform X1"
                     /calculated_mol_wt=12344
     Region          <1..49
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..106
                     /gene="LOC107921087"
                     /coded_by="XM_016850951.2:271..591"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkii fvegrsdqit
       61 kshypedsfv dfvnilvvwh virqmimflm fpsyvwcfgm fdvvew
//
LOCUS       XP_016706441              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706441
VERSION     XP_016706441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850952.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_016850952.2:271..555"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942430              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942430
VERSION     XP_040942430.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086496.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086496.1:176..460"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942431              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942431
VERSION     XP_040942431.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086497.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086497.1:224..508"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942432              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942432
VERSION     XP_040942432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086498.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086498.1:217..501"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942433              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942433
VERSION     XP_040942433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086499.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086499.1:330..614"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942434              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942434
VERSION     XP_040942434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086500.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086500.1:276..560"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942435              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942435
VERSION     XP_040942435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086501.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086501.1:232..516"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942436              94 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942436
VERSION     XP_040942436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086502.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="DEAD-box ATP-dependent RNA helicase 5 isoform
                     X2"
                     /calculated_mol_wt=10576
     Region          <1..>79
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..94
                     /gene="LOC107921087"
                     /coded_by="XM_041086502.1:185..469"
                     /db_xref="GeneID:107921087"
ORIGIN      
        1 mldmgfeedv rfilgktcsa rqmvifsatw pagvhrlaqe ymapnpvkvv igskdlaanh
       61 dvmqivevld draryerlta fkislhwlnr mgsi
//
LOCUS       XP_040942437             967 aa            linear   PLN 06-AUG-2024
DEFINITION  insulin-degrading enzyme-like 1, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040942437
VERSION     XP_040942437.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086503.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..967
                     /product="insulin-degrading enzyme-like 1, peroxisomal"
                     /calculated_mol_wt=111260
     Region          9..955
                     /region_name="Ptr"
                     /note="Secreted/periplasmic Zn-dependent peptidases,
                     insulinase-like [Posttranslational modification, protein
                     turnover, chaperones]; COG1025"
                     /db_xref="CDD:440648"
     CDS             1..967
                     /gene="LOC121213639"
                     /coded_by="XM_041086503.1:188..3091"
                     /db_xref="GeneID:121213639"
ORIGIN      
        1 mavgredvei lkpridkrey rrivlrnslq vllisdldtd kcaasmnvgv gsfcdpdgle
       61 glahflehml fyaskkyple dsyskyiteh ggstnaftas emtnyyfdvn tdcfeealdr
      121 faqffikplm sadatmreik avdsenqknl lsdawrmnql qkhlsleshp yhkfstgnwd
      181 tldvrpkakg vdtrqellkf yedkysanlm hlvvyskesl dkiqclvedk fqeirnsdrs
      241 rfqfpgqpct sehleilvra vpikqghklr ivwpitpsil hykegpcryl ghlighegeg
      301 slfyvlkksg watglsageg ewtsefsffn vvidltdagq dnmqdivgll fkyiqllqqs
      361 gvckwifdel savcetgfhy qdkispidyv vnissnmqiy ppkdwlvgsl lpsdfnpaii
      421 qkilnelspe nvrifweskk fegltdkvep wygtaysiek vssskiqawm ssapnenlhl
      481 papnvfipkd lsiknaqeev kfpvllrkss ysklwykpdt vfstpkayvk idfncphagn
      541 spetevlgdl farllldyln eyayyaqvag llygishtds gfevtlvgyn hklrilleti
      601 idkivkfevk pdrfsvikem eikdyqnfkf qqpyqqamyy cslilkdqtr pwverldvlp
      661 rlnvedltnf apmmlsqafl ecyiagnier eeaesmvqhv edvffkgpnp icrplfpsqf
      721 ltnrvvkler gmnycyskeg lnpsdensal vhyiqvhqdd filnvklqlf alvakqpafh
      781 qlrsveqlgy itvlmqrnds gicgvqfiiq stvkgpahid srveaflkmf enklyemtnd
      841 efksnvnali dmklekhknl reesrfywre itdgtlkfdr reaevaalkk ltqqelieff
      901 nenvkvgatr kktlsvqvhg nqhlaeyhsq kseavqpnti qindifsfrr sqplygsfrg
      961 gighvkl
//
LOCUS       XP_016706701             383 aa            linear   PLN 06-AUG-2024
DEFINITION  delta(12)-fatty-acid desaturase FAD2 [Gossypium hirsutum].
ACCESSION   XP_016706701
VERSION     XP_016706701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..383
                     /product="delta(12)-fatty-acid desaturase FAD2"
                     /calculated_mol_wt=44152
     Region          1..383
                     /region_name="PLN02505"
                     /note="omega-6 fatty acid desaturase"
                     /db_xref="CDD:178121"
     Site            order(105,109,141,144..145,315,318..319)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239584"
     CDS             1..383
                     /gene="LOC107921339"
                     /coded_by="XM_016851212.2:174..1325"
                     /db_xref="GeneID:107921339"
ORIGIN      
        1 mgaggrtsvp pspkkpefnp lkrvpcskpp ftlcqikkai pphcfkrfvl rsfsyliydl
       61 vlaslfyyva tnyfpslpqa lpyvawpiyw amqgciftaf walahecghq afsdyqwldd
      121 tigfilhtfl ltpyfslkys hrrhhsntgs lerdevfvpk kksalkwwak hfnnplgrfl
      181 eisiqltlgw plyllfnitg ppydrlachy dpygpifsdr qrlqiyvsda gvlavtyaly
      241 llvlakgvgw visvygvpll vvnaflvmit ylqhthpslp hyessewdwl rgalstvdrd
      301 ygilnkvfhd itrihvahhl fptiphyham eatkvikpil geyyqfdgtp vykaiwrelk
      361 ecvyvepdag dndkgvlwfr nkl
//
LOCUS       XP_016753238             358 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL28 [Gossypium
            hirsutum].
ACCESSION   XP_016753238
VERSION     XP_016753238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897749.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..358
                     /product="probable serine/threonine-protein kinase PBL28"
                     /calculated_mol_wt=40247
     Region          69..341
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(69..73,77,89,91,123,139..142,146,148,192,194,
                     196..197,199,210,213,231..234)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(69..73,77,89,91,123,139..142,146,192,194,196..197,
                     199,210)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(73,146,148,192,194,196,213,231..234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(209..216,227..234)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..358
                     /gene="LOC107961672"
                     /coded_by="XM_016897749.2:109..1185"
                     /db_xref="GeneID:107961672"
ORIGIN      
        1 mpfglvsawn krrrskpqdh tdpwiykpve ywqiedqtsr pskrrhgssv ftlkemevat
       61 csfsdenllg kggfgrvykg slrsgevvai kkmelpsfke aegehefrve vdifsrldhp
      121 nlvsligyca dgkhrflvye ymqkgnlqdh lngigetkmd wpsrlklalg aarglaylhs
      181 ssavgipivh rdfkstnvll nanfeakisd fglakllpeg qetsvtarfl gtfgyfdpey
      241 tstgkltlqs dvyafgvvll elltgrravd inqgpnyqnl vlqvrhilnd rkkllklidp
      301 dmgrnsytie siamftklas rcvrvesgdr psmpecvkel qlvfctnvkg rglgfrmg
//
LOCUS       XP_040942439             133 aa            linear   PLN 06-AUG-2024
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase 2 [Gossypium
            hirsutum].
ACCESSION   XP_040942439
VERSION     XP_040942439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086505.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     2"
                     /calculated_mol_wt=14705
     Region          <12..>85
                     /region_name="PLN02380"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /db_xref="CDD:178006"
     CDS             1..133
                     /gene="LOC121203353"
                     /coded_by="XM_041086505.1:426..827"
                     /db_xref="GeneID:121203353"
ORIGIN      
        1 mpeisslfvl lqgfvtaisn lclfvpaiyd ltvaipktsp sptllrlfng qssvvyihik
       61 rrlmkqlpet deavaqrckd ifvekmitst teqfildfyg naaksiaavr kmpqeraeim
      121 lpplaasvmc sri
//
LOCUS       XP_040942440              87 aa            linear   PLN 06-AUG-2024
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Gossypium
            hirsutum].
ACCESSION   XP_040942440
VERSION     XP_040942440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086506.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..87
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     2-like"
                     /calculated_mol_wt=9585
     Region          4..>72
                     /region_name="PLN02380"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /db_xref="CDD:178006"
     CDS             1..87
                     /gene="LOC107921633"
                     /coded_by="XM_041086506.1:14..277"
                     /db_xref="GeneID:107921633"
ORIGIN      
        1 mnrkltaaav ivplsllffi sglvinlfqa vsfvliwpls kntyrtintv alelllleii
       61 wlvdswagvk vrnmpssypi ievisig
//
LOCUS       XP_016706780             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706780
VERSION     XP_016706780.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851291.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=28636
     CDS             1..258
                     /gene="LOC107921442"
                     /coded_by="XM_016851291.2:1..777"
                     /db_xref="GeneID:107921442"
ORIGIN      
        1 matrtassss pskpagrqlg ellqqqqepf ileiylserg slrnnksigc hgnsgkflri
       61 nkkgipnfpk llkvvvcnkl faikgskakn sadtfstasn ttvynscsdt dideppmlkl
      121 ynerekkdva hsklqcgcme dspqfymtrq kslflsklii lsasvwnllv qskpglrela
      181 epdgsnsspf siskrvlqpt nkvpllrsrr elleldgmds tkewnvyeeq keiglaigda
      241 iaeeittqvv mdmiliys
//
LOCUS       XP_040942441             252 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942441
VERSION     XP_040942441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086507.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=27998
     CDS             1..252
                     /gene="LOC107921442"
                     /coded_by="XM_041086507.1:1..759"
                     /db_xref="GeneID:107921442"
ORIGIN      
        1 matrtassss pskpagrqlg ellqqqqepf ileiylserg slrnnksigc hgnsgkflri
       61 nkkgipnfpk llkvvvcnkl faikgskakn sadtfstasn ttvynscsdt dideppmlkl
      121 ynerekklqc gcmedspqfy mtrqkslfls kliilsasvw nllvqskpgl relaepdgsn
      181 sspfsiskrv lqptnkvpll rsrrelleld gmdstkewnv yeeqkeigla igdaiaeeit
      241 tqvvmdmili ys
//
LOCUS       XP_016729198             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729198
VERSION     XP_016729198.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873709.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18430
     CDS             1..166
                     /gene="LOC107940271"
                     /coded_by="XM_016873709.2:260..760"
                     /db_xref="GeneID:107940271"
ORIGIN      
        1 msrkghshnk lvrfitipfr algkardlyv ksmtscasrv sfgqgsgdys gqysglprsf
       61 sassatsshd nedlrdlira asvrslghrn eiemfmqeql kqmrsskglp ksssvgmgri
      121 dedkpcddfe ekdeapvdnk kqdslfkrsk tyasvtkrts vafdsy
//
LOCUS       XP_016706745             109 aa            linear   PLN 06-AUG-2024
DEFINITION  CLAVATA3/ESR (CLE)-related protein 25 [Gossypium hirsutum].
ACCESSION   XP_016706745
VERSION     XP_016706745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851256.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="CLAVATA3/ESR (CLE)-related protein 25"
                     /calculated_mol_wt=11614
     CDS             1..109
                     /gene="LOC107921403"
                     /coded_by="XM_016851256.2:377..706"
                     /db_xref="GeneID:107921403"
ORIGIN      
        1 mgggssllfr tlfgtlivlg filgisvgfl ksegnekktt itsddhqsst ttakvqqeee
       61 qvkvlgqgks nvahpkqdln ymskrrvpng pdpihnrrag nsgrppgqv
//
LOCUS       XP_016707527             432 aa            linear   PLN 06-AUG-2024
DEFINITION  polyubiquitin [Gossypium hirsutum].
ACCESSION   XP_016707527
VERSION     XP_016707527.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707527.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..432
                     /product="polyubiquitin"
                     /calculated_mol_wt=48328
     Region          52..127
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(57..60,62,85..88,91,93,95,97..100,119..127)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(59..63,82..86,91,93,95,97..100,119,121..127)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          128..203
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(133..136,138,161..164,167,169,171,173..176,195..203)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(135..139,158..162,167,169,171,173..176,195,197..203)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          204..279
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(209..212,214,237..240,243,245,247,249..252,271..279)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(211..215,234..238,243,245,247,249..252,271,273..279)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          280..355
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(285..288,290,313..316,319,321,323,325..328,347..355)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(287..291,310..314,319,321,323,325..328,347,349..355)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          356..431
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(361..364,366,389..392,395,397,399,401..404,423..431)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(363..367,386..390,395,397,399,401..404,423,425..431)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     CDS             1..432
                     /gene="LOC107922157"
                     /coded_by="XM_016852038.2:91..1389"
                     /db_xref="GeneID:107922157"
ORIGIN      
        1 mwqeligyti gnivvksans tykkglnlpt yspadssvfk hfesfsnysd kmqifvktlt
       61 gktitleves sdtidnvkak iqdkegippd qqrlifagkq ledgrtlady niqkestlhl
      121 vlrlrggmqi fvktltgkti tlevessdti dnvkakiqdk egippdqqrl ifagkqledg
      181 rtladyniqk estlhlvlrl rggmqifvkt ltgktitlev essdtidnvk akiqdkegip
      241 pdqqrlifag kqledgrtla dyniqkestl hlvlrlrggm qifvktltgk titlevessd
      301 tidnvkakiq dkegippdqq rlifagkqle dgrtladyni qkestlhlvl rlrggmqifv
      361 ktltgktitl evessdtidn lkakiqdkeg ippdqqrlif agkqledgrt ladyniqkes
      421 tlhlvlrlrg gf
//
LOCUS       XP_016707296             771 aa            linear   PLN 06-AUG-2024
DEFINITION  probable galactinol--sucrose galactosyltransferase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016707296
VERSION     XP_016707296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851807.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..771
                     /product="probable galactinol--sucrose
                     galactosyltransferase 2"
                     /calculated_mol_wt=84298
     Region          1..771
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     CDS             1..771
                     /gene="LOC107921999"
                     /coded_by="XM_016851807.2:249..2564"
                     /db_xref="GeneID:107921999"
ORIGIN      
        1 mtvtpgisin dgnlvvhgkt iltgmpdniv ltpgsgvglv agafigatas dckslhvfpi
       61 gvleglrfmc cfrfklwwmt qrmgtcgkdv pletqfmlve skeeddpnap tiytvflpll
      121 egqfravlqg ndkneleicl esgdntvetn rglylvymha gtnpfevinq avkalekhmq
      181 tflhrekkkl psfldwfgwc twdafytdvt aegvkeglks lseggtpprf liiddgwqqi
      241 eskpkesdcv vqegaqfasr ltgikenakf kkndqnneqi sglkhvvdea kqhhnvknvy
      301 vwhalagywg gvkpaaagme hydtalaypv qspgvmgnqp divmdslavh glglvhpkkv
      361 fnfynelhay lascgvdgvk vdvqniietl gaghggrvsl trsyvqalea sisrnfpdng
      421 ciacmchntd giystkqtav vrasddfypr dpashtihis svayntlflg efmqpdwdmf
      481 hslhpaadyh aaaravggca iyvsdkpgnh nfellkklvl pdgsvlrtql pgrptvdclf
      541 adpardgisl lkiwnvnkcs gvvgafncqg agwckvtkkt rihdaspgtl tgsvcandvd
      601 siaqvagadw ngesvvyahr sgelvrlpkg asvpvtlkvl eyelfhfcpv keisntisfa
      661 piglldmfns sgavekfevq mtsneklqff dgevsseltt slsnnrnpta aislkvrgcg
      721 rfgayssqhp lkccvdnadt hfnydsatgl vtltlpvpse emyrwhveiq v
//
LOCUS       XP_016707297             771 aa            linear   PLN 06-AUG-2024
DEFINITION  probable galactinol--sucrose galactosyltransferase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016707297
VERSION     XP_016707297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851808.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..771
                     /product="probable galactinol--sucrose
                     galactosyltransferase 2"
                     /calculated_mol_wt=84298
     Region          1..771
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     CDS             1..771
                     /gene="LOC107921999"
                     /coded_by="XM_016851808.2:245..2560"
                     /db_xref="GeneID:107921999"
ORIGIN      
        1 mtvtpgisin dgnlvvhgkt iltgmpdniv ltpgsgvglv agafigatas dckslhvfpi
       61 gvleglrfmc cfrfklwwmt qrmgtcgkdv pletqfmlve skeeddpnap tiytvflpll
      121 egqfravlqg ndkneleicl esgdntvetn rglylvymha gtnpfevinq avkalekhmq
      181 tflhrekkkl psfldwfgwc twdafytdvt aegvkeglks lseggtpprf liiddgwqqi
      241 eskpkesdcv vqegaqfasr ltgikenakf kkndqnneqi sglkhvvdea kqhhnvknvy
      301 vwhalagywg gvkpaaagme hydtalaypv qspgvmgnqp divmdslavh glglvhpkkv
      361 fnfynelhay lascgvdgvk vdvqniietl gaghggrvsl trsyvqalea sisrnfpdng
      421 ciacmchntd giystkqtav vrasddfypr dpashtihis svayntlflg efmqpdwdmf
      481 hslhpaadyh aaaravggca iyvsdkpgnh nfellkklvl pdgsvlrtql pgrptvdclf
      541 adpardgisl lkiwnvnkcs gvvgafncqg agwckvtkkt rihdaspgtl tgsvcandvd
      601 siaqvagadw ngesvvyahr sgelvrlpkg asvpvtlkvl eyelfhfcpv keisntisfa
      661 piglldmfns sgavekfevq mtsneklqff dgevsseltt slsnnrnpta aislkvrgcg
      721 rfgayssqhp lkccvdnadt hfnydsatgl vtltlpvpse emyrwhveiq v
//
LOCUS       XP_040942442             755 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g33680 [Gossypium
            hirsutum].
ACCESSION   XP_040942442
VERSION     XP_040942442.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086508.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..755
                     /product="pentatricopeptide repeat-containing protein
                     At2g33680"
                     /calculated_mol_wt=83330
     Region          74..754
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          94..119
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          123..150
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          156..185
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          191..215
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          224..251
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          257..321
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..350
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          393..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          501..524
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          530..557
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          563..592
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          599..623
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..755
                     /gene="LOC107921277"
                     /coded_by="XM_041086508.1:4..2271"
                     /db_xref="GeneID:107921277"
ORIGIN      
        1 meaaygatvl lhpfkpqnpv fltkaklpvk akcpslkkvn csissistnk emvlaedwph
       61 llklsigsgn fllgqaihaf liksnssndv fqgnnlinfy tkfnelhdar kvfdeipvrn
      121 titwttlikg hlnngdsesv fsiahdmcfs gekfnehtcs vilqacseee dlirgeqihg
      181 fviksgiegn afvgtslisl ysttgflnea envfnnisvk dvqclnymil eygkagfmek
      241 afqafvdvls sdleptdytf tniistfsen vgieegrqlh glavkygvin vtslgnalit
      301 mygklgmved sermfhslse rnliswtali sgyvrngcse kaadiflell yhgiycdpsc
      361 lvtvldgcse crnldlgvql hgfviksgyl cdanivtalv dmysksdnlk sakivfdgfs
      421 sksialfnai lvgfiktnrd dddedamvlf rqlrfagikp dlvtfsrlls lsanqaclvk
      481 getlhaytik tgfesslmvs nalitmyakc gsikgacqtf dgmhcrdsvs wnamvsaysi
      541 hgqgkaalrl fkeikgegfa vdeftvlail qaccytglwh dgirifneme ssykinplie
      601 hyacmvdllg ragclseamn lisnsrfrds pllwrtlvnv cklqgdidfa mlasknlldl
      661 speeagsyil vsntyagsgm ldealkvrta mndlklskqa gcswieidnk vhcfvasdkd
      721 hpessdiyan ldqlmdeikw kncdindphs igeiv
//
LOCUS       XP_016706639             755 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g33680 [Gossypium
            hirsutum].
ACCESSION   XP_016706639
VERSION     XP_016706639.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851150.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706639.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..755
                     /product="pentatricopeptide repeat-containing protein
                     At2g33680"
                     /calculated_mol_wt=83330
     Region          74..754
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          94..119
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          123..150
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          156..185
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          191..215
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          224..251
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          257..321
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..350
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          393..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          501..524
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          530..557
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          563..592
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          599..623
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..755
                     /gene="LOC107921277"
                     /coded_by="XM_016851150.2:4..2271"
                     /db_xref="GeneID:107921277"
ORIGIN      
        1 meaaygatvl lhpfkpqnpv fltkaklpvk akcpslkkvn csissistnk emvlaedwph
       61 llklsigsgn fllgqaihaf liksnssndv fqgnnlinfy tkfnelhdar kvfdeipvrn
      121 titwttlikg hlnngdsesv fsiahdmcfs gekfnehtcs vilqacseee dlirgeqihg
      181 fviksgiegn afvgtslisl ysttgflnea envfnnisvk dvqclnymil eygkagfmek
      241 afqafvdvls sdleptdytf tniistfsen vgieegrqlh glavkygvin vtslgnalit
      301 mygklgmved sermfhslse rnliswtali sgyvrngcse kaadiflell yhgiycdpsc
      361 lvtvldgcse crnldlgvql hgfviksgyl cdanivtalv dmysksdnlk sakivfdgfs
      421 sksialfnai lvgfiktnrd dddedamvlf rqlrfagikp dlvtfsrlls lsanqaclvk
      481 getlhaytik tgfesslmvs nalitmyakc gsikgacqtf dgmhcrdsvs wnamvsaysi
      541 hgqgkaalrl fkeikgegfa vdeftvlail qaccytglwh dgirifneme ssykinplie
      601 hyacmvdllg ragclseamn lisnsrfrds pllwrtlvnv cklqgdidfa mlasknlldl
      661 speeagsyil vsntyagsgm ldealkvrta mndlklskqa gcswieidnk vhcfvasdkd
      721 hpessdiyan ldqlmdeikw kncdindphs igeiv
//
LOCUS       XP_016706369             353 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-9 [Gossypium hirsutum].
ACCESSION   XP_016706369
VERSION     XP_016706369.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850880.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706369.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="nuclear transcription factor Y subunit A-9"
                     /calculated_mol_wt=38967
     Region          172..233
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..353
                     /gene="LOC107921027"
                     /coded_by="XM_016850880.2:188..1249"
                     /db_xref="GeneID:107921027"
ORIGIN      
        1 mhqktdgtnh pepnannnkp qmvqvqpcwc strqdsfltg vlgegrtsls lakhsngglg
       61 tktsespsti rtddklcssk empltifphp dgkcgdeqpy lqhaipiirp tmgeyvppep
      121 qlelvghsia cpsypytdpy yggvvppyvp qslvhshslg vhparmalpl emaeepvyvn
      181 akqyhgilrr rqsrakaele kklikvrkpy lhesrhlham rrargcggrf lntkkldsda
      241 skatpnkssd tslnlpsqcp entsgisvtn qmswndnssv ghreaaesel qgtnmqqafs
      301 ngngsgyysh hqgfrfstsr slsndmlegg dcprqqyeri mvngvphral tik
//
LOCUS       XP_016706370             353 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-9 [Gossypium hirsutum].
ACCESSION   XP_016706370
VERSION     XP_016706370.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706370.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="nuclear transcription factor Y subunit A-9"
                     /calculated_mol_wt=38967
     Region          172..233
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..353
                     /gene="LOC107921027"
                     /coded_by="XM_016850881.2:235..1296"
                     /db_xref="GeneID:107921027"
ORIGIN      
        1 mhqktdgtnh pepnannnkp qmvqvqpcwc strqdsfltg vlgegrtsls lakhsngglg
       61 tktsespsti rtddklcssk empltifphp dgkcgdeqpy lqhaipiirp tmgeyvppep
      121 qlelvghsia cpsypytdpy yggvvppyvp qslvhshslg vhparmalpl emaeepvyvn
      181 akqyhgilrr rqsrakaele kklikvrkpy lhesrhlham rrargcggrf lntkkldsda
      241 skatpnkssd tslnlpsqcp entsgisvtn qmswndnssv ghreaaesel qgtnmqqafs
      301 ngngsgyysh hqgfrfstsr slsndmlegg dcprqqyeri mvngvphral tik
//
LOCUS       XP_040942443             353 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-9 [Gossypium hirsutum].
ACCESSION   XP_040942443
VERSION     XP_040942443.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086509.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="nuclear transcription factor Y subunit A-9"
                     /calculated_mol_wt=38967
     Region          172..233
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..353
                     /gene="LOC107921027"
                     /coded_by="XM_041086509.1:191..1252"
                     /db_xref="GeneID:107921027"
ORIGIN      
        1 mhqktdgtnh pepnannnkp qmvqvqpcwc strqdsfltg vlgegrtsls lakhsngglg
       61 tktsespsti rtddklcssk empltifphp dgkcgdeqpy lqhaipiirp tmgeyvppep
      121 qlelvghsia cpsypytdpy yggvvppyvp qslvhshslg vhparmalpl emaeepvyvn
      181 akqyhgilrr rqsrakaele kklikvrkpy lhesrhlham rrargcggrf lntkkldsda
      241 skatpnkssd tslnlpsqcp entsgisvtn qmswndnssv ghreaaesel qgtnmqqafs
      301 ngngsgyysh hqgfrfstsr slsndmlegg dcprqqyeri mvngvphral tik
//
LOCUS       XP_016707563             716 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 30 [Gossypium hirsutum].
ACCESSION   XP_016707563
VERSION     XP_016707563.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852074.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707563.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..716
                     /product="zinc finger CCCH domain-containing protein 30"
                     /calculated_mol_wt=77901
     Region          <32..211
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          87..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          122..156
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          301..325
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..716
                     /gene="LOC107922180"
                     /coded_by="XM_016852074.2:233..2383"
                     /db_xref="GeneID:107922180"
ORIGIN      
        1 mccgserlns kltprtsnss fednrlprvd mnhltvated tfasllelaa nndvegfkrs
       61 mehdpsgvde vglwygrqkg skqmvneert plmvasmygs idviklilss sdadvnrlcg
      121 rdkstalhca asggadnvid vvklllaaga dvntvdangh lpvdvivvpp klgavkstle
      181 ellaiegsgf dwnsqlaava nsdsfpllpl kengslssgs dspmkskpid apissasekk
      241 eypidpslpd iknsiystde frmysfkvrp csrayshdwt ecpfvhpgen arrrdprkfh
      301 yscvpcpdfr kgtcrrgdmc eyahgvfecw lhpaqyrtrl ckdgtscarr vcffahtade
      361 lrplyvstgs avpsprlsts gatamdfaaa msvlpgspss vsvmspspft ppmspsmngm
      421 shsnvgwpqp nvpalhllgs nlqssrlrss lnardiqaed fnllsdfdvq qlrlmnelpr
      481 ltqpsmssss fnrsgrmktl tpsnlddlfs aesssprysd qamaaavfsp thksavlnqf
      541 qqqqnmlspi ntnfspksie hpllqaslsg rmsprnvepi spmssrvsml aqrekqqqfr
      601 slssrelgsg saaivgspvn swskwgssng kpdwavnadg ldkhrrsssf elgngdepdl
      661 swiqslvkes pteikekiaa pvsgevssvn adpvdnavlg awleqmqldq lvaqqn
//
LOCUS       XP_016707421             684 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 30 [Gossypium hirsutum].
ACCESSION   XP_016707421
VERSION     XP_016707421.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707421.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..684
                     /product="zinc finger CCCH domain-containing protein 30"
                     /calculated_mol_wt=74455
     Region          <2..154
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(16..17,20..22,24..25,29,32,39,57,59,63..64,67..69,
                     71..72,76,79,90,92,94,98..99,102..104,109..110,114,117,
                     126)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          57..90
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          92..126
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..293
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..684
                     /gene="LOC107922093"
                     /coded_by="XM_016851932.2:543..2597"
                     /db_xref="GeneID:107922093"
ORIGIN      
        1 mnhltlvtdd tfasllelaa nndvegfkrw iehdpfsvde vglwygrqkg skqmvneert
       61 plmvastygs idvikliiss sdadvnrvcg rdkstalhca asggadnvid vvklllaaga
      121 dvnmvdangh ppvdvivvpp klrdvkltle kllatesscf dsrvaavans dspplspsqe
      181 ngslfsgsds piksrpsdap issvsekkey pidpslpdik nsiystdelr mysfkvrpcs
      241 rayshdwtec pfvhpgenar rrdprkfhys cvpcpdfrkg acrrgdmcey ahgvfecwlh
      301 paqyrtrlck dgtscarrvc ffahtadelr plyvstgsav psprsstsga tamdfaaams
      361 llpgspssvs vmlpspftpp mspsvngmph snvgwpqpnv palhlpgsnl qssrlrssln
      421 ardiqaedfn vlpdfdlqqh qlinelsslt qpsmssssfn rsgrmktltp snlddlfsae
      481 sssprysdqa laaavfspth ksavlnqfqq qqsmlspint nyspksiehp llqaslsgrm
      541 sprnvepisp mssrvsmlaq wekqqefrsl ssrelgsgla aivgspvnsw skwgssngkp
      601 dwavnanglg khrrsssfeh gngdepdlsw vqslvkespi eikdkiaapv sgegssrnsd
      661 tvdnamlgaw leqmqldqlv aqqn
//
LOCUS       XP_016706760             321 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HOX11 [Gossypium hirsutum].
ACCESSION   XP_016706760
VERSION     XP_016706760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..321
                     /product="homeobox-leucine zipper protein HOX11"
                     /calculated_mol_wt=35696
     Region          <93..128
                     /region_name="HD-ZIP_N"
                     /note="HD-ZIP protein N terminus; pfam04618"
                     /db_xref="CDD:461370"
     Region          160..216
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(162..165,167,184,190,203,205..206,209..210,212..214,
                     216..217)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(163,166,206,209..210,213)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          218..260
                     /region_name="HALZ"
                     /note="homeobox associated leucin zipper; smart00340"
                     /db_xref="CDD:128634"
     CDS             1..321
                     /gene="LOC107921417"
                     /coded_by="XM_016851271.2:502..1467"
                     /db_xref="GeneID:107921417"
ORIGIN      
        1 melalslgdp skpfsllgnt pklsrskdlg fcmglgdgfk sqhkidafea qskggdsdek
       61 rvpsdlplyr hllpssqtql ripclthkyg dgrgldvnql ppeaaaeedd eeseegagis
      121 spnstvssfr mdfgirngkn kgkrdlever vsddddengs trkklrlske qsafleesfk
      181 eqntlnpkqk lalakqlnlr prqvevwfqn rrartklkqt evdceylkrs cetlreenkr
      241 lqkelqelrv lktcqpfymq spattltmcp scerlatkgs aataatgyps ffssantcdp
      301 etspsppgnf fksldvtsek t
//
LOCUS       XP_040942445             272 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942445
VERSION     XP_040942445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086511.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=30646
     CDS             1..272
                     /gene="LOC121213646"
                     /coded_by="XM_041086511.1:817..1635"
                     /db_xref="GeneID:121213646"
ORIGIN      
        1 mslfpsvnha yfmivqeesq rqhlsrtmvs epiafysfns tskrrfngvs dhfkvkghkw
       61 encyrligyp pdfkftkkrr stltgsvvnn vvatdfvelv dctstlnall apffikaqfq
      121 qildllnkds sgeattslag mafssewild igatnhmlln fkrleslfsc ssspscvrlp
      181 tsslipityv rtctvsstlk lsnvlyilnf cynlisilkl tinlhcfvsf yphlcflqdl
      241 ssgkimgigk ervdphsish tystchlplh tr
//
LOCUS       XP_040942446             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942446
VERSION     XP_040942446.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086512.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=17015
     CDS             1..150
                     /gene="LOC121213646"
                     /coded_by="XM_041086512.1:817..1269"
                     /db_xref="GeneID:121213646"
ORIGIN      
        1 mslfpsvnha yfmivqeesq rqhlsrtmvs epiafysfns tskrrfngvs dhfkvkghkw
       61 encyrligyp pdfkftkkrr stltgsvvnn vvatdfvelv dctstlnall apffikaqfq
      121 qildllnkds sgeattslag slkwqdhgdw
//
LOCUS       XP_016707553             292 aa            linear   PLN 06-AUG-2024
DEFINITION  glucuronoxylan 4-O-methyltransferase 1-like [Gossypium hirsutum].
ACCESSION   XP_016707553
VERSION     XP_016707553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..292
                     /product="glucuronoxylan 4-O-methyltransferase 1-like"
                     /calculated_mol_wt=32747
     Region          69..290
                     /region_name="Polysacc_synt_4"
                     /note="Polysaccharide biosynthesis; cl04661"
                     /db_xref="CDD:383809"
     CDS             1..292
                     /gene="LOC107922172"
                     /coded_by="XM_016852064.2:252..1130"
                     /db_xref="GeneID:107922172"
ORIGIN      
        1 mrtkgsqaln fkvlllgvff aflllfvlrs sisssqydts dlqtfaaakt sngvkesksg
       61 ancspscdki prslaqalih yatssitpqq tlkeisvtak ilekkspcnf lvfglghdsl
      121 mwsslnyggr tvfleedeaw ieqirrrfpm lesyhvtyds kvnqaenlmd vgrgpectai
      181 adpkysmcql alkglpsevy emkwdlimvd aptgyyedap grmtaiytag mmarnkekge
      241 tdvfvhdvnr vvedkfsmaf lcqgymkkqe grlrhfrips hkdslerplc pe
//
LOCUS       XP_016707188             230 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 12-oxophytodienoate reductase 11 [Gossypium hirsutum].
ACCESSION   XP_016707188
VERSION     XP_016707188.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851699.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707188.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="putative 12-oxophytodienoate reductase 11"
                     /calculated_mol_wt=25881
     Region          <4..206
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(160..161,182..183)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240073"
     CDS             1..230
                     /gene="LOC107921870"
                     /coded_by="XM_016851699.2:229..921"
                     /db_xref="GeneID:107921870"
ORIGIN      
        1 mdwspprrlr tdeipatvnn frlaarnaie agfdgveihg angylldqfm kdqvndrtdk
       61 yggslenrcr fpleiveavv neigadkvgm rlssyasyme asesnpealg vymanavnkf
      121 gilylhviep rmikindkye tphsllpmrn afkgtfiaag ryngddgnka madnysdlva
      181 fgwlflanpd lprrfqlnal lnkynrdtfy ipdpvlgytd ypfledinss
//
LOCUS       XP_016706509             372 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706509
VERSION     XP_016706509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851020.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="zinc transporter 1 isoform X1"
                     /calculated_mol_wt=39953
     Region          40..372
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; cl00437"
                     /db_xref="CDD:444905"
     CDS             1..372
                     /gene="LOC107921146"
                     /coded_by="XM_016851020.2:93..1211"
                     /db_xref="GeneID:107921146"
ORIGIN      
        1 mktkehsfis slficllylp vlvtaecsce nevlskdtgn ktkalkykfv aissilmaga
       61 vgvslpimak kiptfgpqnn ifflikafag gvilatafvh ilpdayqsft spclsekpwg
      121 vfpftgflam vsailtmmmd tfatsfckss hfdkalpvng deemlgeheg hvhvhthpth
      181 dhahgsaess hhlmitqrii sqvpssfsak sfiltkrkcy kvlevgivvh sviigvalga
      241 sqsattikpl vaaltfhqff egmglggcis qakfksraia mmlvifsltt pmgialgmgi
      301 skiynenspk alvvegifns lsagiliyms lvdllgvdfm nplmqtslkl llgsnlslll
      361 gaasmsllak ws
//
LOCUS       XP_016706510             353 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706510
VERSION     XP_016706510.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851021.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="zinc transporter 1 isoform X2"
                     /calculated_mol_wt=37781
     Region          40..353
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; cl00437"
                     /db_xref="CDD:444905"
     CDS             1..353
                     /gene="LOC107921146"
                     /coded_by="XM_016851021.2:112..1173"
                     /db_xref="GeneID:107921146"
ORIGIN      
        1 mktkehsfis slficllylp vlvtaecsce nevlskdtgn ktkalkykfv aissilmaga
       61 vgvslpimak kiptfgpqnn ifflikafag gvilatafvh ilpdayqsft spclsekpwg
      121 vfpftgflam vsailtmmmd tfatsfckss hfdkalpvng deemlgeheg hvhvhthpth
      181 dhahgsaess hhlmitqrii sqvlevgivv hsviigvalg asqsattikp lvaaltfhqf
      241 fegmglggci sqakfksrai ammlvifslt tpmgialgmg iskiynensp kalvvegifn
      301 slsagiliym slvdllgvdf mnplmqtslk lllgsnlsll lgaasmslla kws
//
LOCUS       XP_040942448             553 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein SCD2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942448
VERSION     XP_040942448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086514.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..553
                     /product="coiled-coil domain-containing protein SCD2
                     isoform X1"
                     /calculated_mol_wt=61278
     Region          <205..475
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <205..>338
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..553
                     /gene="LOC107921476"
                     /coded_by="XM_041086514.1:238..1899"
                     /db_xref="GeneID:107921476"
ORIGIN      
        1 mdrkrtesps ytrrwsshsg tgstgggves palspahnqp rharsssatg issikrtqnf
       61 aakaaaqrla qvmasqttdd ddeeddgddl gfrysapppl alsrkntaat aggagnktal
      121 nytrigrsps palarnlvee apsvrststg rssmslraap pvpppnktsl rtavslpses
      181 pknrqpekrf tsdigfnlkd tgdyreasal rdeldmlqee nenvidklrl eeercqevea
      241 rvkelekqva algegvslea kllsrkeaal rqreaalkda kqtkdvvdke ilsfkseven
      301 akdeataivr qlhgaesevk alrsmtqrmv ltqkemeevv lkrcwlaryw glavrygica
      361 diavskheyw sslaplpfev vvsagqkake eisekgdden ekrsklvedl sdltgegnie
      421 smlsvemglk elaslkveea ivnalaqqrr assvrislsd iksprdtkfm eafelspees
      481 edvlfkeawl tyiwiraksh gieedtaker lkfwisrsvh spsshdavdv eeglmelrkl
      541 gierrlweas rrn
//
LOCUS       XP_040942449             400 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein SCD2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942449
VERSION     XP_040942449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086515.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="coiled-coil domain-containing protein SCD2
                     isoform X2"
                     /calculated_mol_wt=45250
     Region          <52..>185
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..400
                     /gene="LOC107921476"
                     /coded_by="XM_041086515.1:222..1424"
                     /db_xref="GeneID:107921476"
ORIGIN      
        1 mslraappvp ppnktslrta vslpsespkn rqpekrftsd igfnlkdtgd yreasalrde
       61 ldmlqeenen vidklrleee rcqevearvk elekqvaalg egvsleakll srkeaalrqr
      121 eaalkdakqt kdvvdkeils fksevenakd eataivrqlh gaesevkalr smtqrmvltq
      181 kemeevvlkr cwlarywgla vrygicadia vskheywssl aplpfevvvs agqkakeeis
      241 ekgddenekr sklvedlsdl tgegniesml svemglkela slkveeaivn alaqqrrass
      301 vrislsdiks prdtkfmeaf elspeesedv lfkeawltyi wirakshgie edtakerlkf
      361 wisrsvhsps shdavdveeg lmelrklgie rrlweasrrn
//
LOCUS       XP_016729881             550 aa            linear   PLN 06-AUG-2024
DEFINITION  C-type lectin receptor-like tyrosine-protein kinase At1g52310
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016729881
VERSION     XP_016729881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874392.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..550
                     /product="C-type lectin receptor-like tyrosine-protein
                     kinase At1g52310 isoform X1"
                     /calculated_mol_wt=61283
     Region          47..181
                     /region_name="CLECT"
                     /note="C-type lectin (CTL) or carbohydrate-recognition
                     domain (CRD); smart00034"
                     /db_xref="CDD:214480"
     Site            order(147,151,161,167,169..172,175..177)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     Region          276..543
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..550
                     /gene="LOC107940927"
                     /coded_by="XM_016874392.2:502..2154"
                     /db_xref="GeneID:107940927"
ORIGIN      
        1 mgvkvaplqf ivlvasfavp lvasdtasng wtapsnnssk ykgneecpsg wvlapnktkc
       61 fgyneslesw deseihckqy hghlaaltsf eelnfaqhlc gqsvngcwvg grvsnstiss
      121 gwkwsdntsv wnesvlrssa qsicpksscf vnnsvdlctl vkngseplls krcnashafl
      181 cmvdiedkcy ymhchkeyli ilavvsglvl fttfavvvwl laykrskrrr rsrklsnpat
      241 salvppswki ftsdelrsit knfsegnrlh gdaktgstys gllpdgskva vkrlkrssfq
      301 rkkefyseig rvaklhhpnl vavkgccydh gdryivyefi tngpldrwly hiprggrsld
      361 wtmrikiatt laqgiaflhd kvkphvvhrd irasnvllde efgahlmgvg lskivpwevm
      421 hertvmaggt ygylapefvy rnelttksdv ysfgvlllei vsgrrpaqqv dsvgwqsife
      481 watplvqahh ypelldplis sstsdipeag diqkvvdlvy actqnvpsmr prmshvvhql
      541 qqlaqpalak
//
LOCUS       XP_016729882             548 aa            linear   PLN 06-AUG-2024
DEFINITION  C-type lectin receptor-like tyrosine-protein kinase At1g52310
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016729882
VERSION     XP_016729882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..548
                     /product="C-type lectin receptor-like tyrosine-protein
                     kinase At1g52310 isoform X2"
                     /calculated_mol_wt=61054
     Region          45..179
                     /region_name="CLECT"
                     /note="C-type lectin (CTL) or carbohydrate-recognition
                     domain (CRD); smart00034"
                     /db_xref="CDD:214480"
     Site            order(145,149,159,165,167..170,173..175)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     Region          274..541
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..548
                     /gene="LOC107940927"
                     /coded_by="XM_016874393.2:505..2151"
                     /db_xref="GeneID:107940927"
ORIGIN      
        1 mgvkvaplqf ivlvasfavp lvasdtasng wtapsnnssk ykaecpsgwv lapnktkcfg
       61 ynesleswde seihckqyhg hlaaltsfee lnfaqhlcgq svngcwvggr vsnstissgw
      121 kwsdntsvwn esvlrssaqs icpksscfvn nsvdlctlvk ngsepllskr cnashaflcm
      181 vdiedkcyym hchkeyliil avvsglvlft tfavvvwlla ykrskrrrrs rklsnpatsa
      241 lvppswkift sdelrsitkn fsegnrlhgd aktgstysgl lpdgskvavk rlkrssfqrk
      301 kefyseigrv aklhhpnlva vkgccydhgd ryivyefitn gpldrwlyhi prggrsldwt
      361 mrikiattla qgiaflhdkv kphvvhrdir asnvlldeef gahlmgvgls kivpwevmhe
      421 rtvmaggtyg ylapefvyrn elttksdvys fgvllleivs grrpaqqvds vgwqsifewa
      481 tplvqahhyp elldplisss tsdipeagdi qkvvdlvyac tqnvpsmrpr mshvvhqlqq
      541 laqpalak
//
LOCUS       XP_016729883             547 aa            linear   PLN 06-AUG-2024
DEFINITION  C-type lectin receptor-like tyrosine-protein kinase At1g52310
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016729883
VERSION     XP_016729883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..547
                     /product="C-type lectin receptor-like tyrosine-protein
                     kinase At1g52310 isoform X3"
                     /calculated_mol_wt=60983
     Region          44..178
                     /region_name="CLECT"
                     /note="C-type lectin (CTL) or carbohydrate-recognition
                     domain (CRD); smart00034"
                     /db_xref="CDD:214480"
     Site            order(144,148,158,164,166..169,172..174)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     Region          273..540
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..547
                     /gene="LOC107940927"
                     /coded_by="XM_016874394.2:508..2151"
                     /db_xref="GeneID:107940927"
ORIGIN      
        1 mgvkvaplqf ivlvasfavp lvasdtasng wtapsnnssk ykecpsgwvl apnktkcfgy
       61 nesleswdes eihckqyhgh laaltsfeel nfaqhlcgqs vngcwvggrv snstissgwk
      121 wsdntsvwne svlrssaqsi cpksscfvnn svdlctlvkn gsepllskrc nashaflcmv
      181 diedkcyymh chkeyliila vvsglvlftt favvvwllay krskrrrrsr klsnpatsal
      241 vppswkifts delrsitknf segnrlhgda ktgstysgll pdgskvavkr lkrssfqrkk
      301 efyseigrva klhhpnlvav kgccydhgdr yivyefitng pldrwlyhip rggrsldwtm
      361 rikiattlaq giaflhdkvk phvvhrdira snvlldeefg ahlmgvglsk ivpwevmher
      421 tvmaggtygy lapefvyrne lttksdvysf gvllleivsg rrpaqqvdsv gwqsifewat
      481 plvqahhype lldplissst sdipeagdiq kvvdlvyact qnvpsmrprm shvvhqlqql
      541 aqpalak
//
LOCUS       XP_016706750             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706750
VERSION     XP_016706750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851261.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26888
     Region          21..>136
                     /region_name="RAD55"
                     /note="RecA-superfamily ATPase, KaiC/GvpD/RAD55 family
                     [Signal transduction mechanisms]; COG0467"
                     /db_xref="CDD:440235"
     CDS             1..239
                     /gene="LOC107921408"
                     /coded_by="XM_016851261.2:248..967"
                     /db_xref="GeneID:107921408"
ORIGIN      
        1 mlesffftkq gdfhpqeadp itllsgppss gktsllfqfa vnsasqcsnv nskvlficsr
       61 rrletkppyl aqgidpgcei fkrikmkyin ddddegikky faafhlkdtf piavvvddfg
      121 dffherscqe rygnprgrdl amvrtlalch naiifanktg pcrlllsdth ngdsprslfi
      181 ykrwirtift vkgddsgslc lkynkysesg sskgtktaky siafqyllle gitevddeq
//
LOCUS       XP_016706751             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706751
VERSION     XP_016706751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851262.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26888
     Region          21..>136
                     /region_name="RAD55"
                     /note="RecA-superfamily ATPase, KaiC/GvpD/RAD55 family
                     [Signal transduction mechanisms]; COG0467"
                     /db_xref="CDD:440235"
     CDS             1..239
                     /gene="LOC107921408"
                     /coded_by="XM_016851262.2:165..884"
                     /db_xref="GeneID:107921408"
ORIGIN      
        1 mlesffftkq gdfhpqeadp itllsgppss gktsllfqfa vnsasqcsnv nskvlficsr
       61 rrletkppyl aqgidpgcei fkrikmkyin ddddegikky faafhlkdtf piavvvddfg
      121 dffherscqe rygnprgrdl amvrtlalch naiifanktg pcrlllsdth ngdsprslfi
      181 ykrwirtift vkgddsgslc lkynkysesg sskgtktaky siafqyllle gitevddeq
//
LOCUS       XP_040942450             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942450
VERSION     XP_040942450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086516.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26888
     Region          21..>136
                     /region_name="RAD55"
                     /note="RecA-superfamily ATPase, KaiC/GvpD/RAD55 family
                     [Signal transduction mechanisms]; COG0467"
                     /db_xref="CDD:440235"
     CDS             1..239
                     /gene="LOC107921408"
                     /coded_by="XM_041086516.1:233..952"
                     /db_xref="GeneID:107921408"
ORIGIN      
        1 mlesffftkq gdfhpqeadp itllsgppss gktsllfqfa vnsasqcsnv nskvlficsr
       61 rrletkppyl aqgidpgcei fkrikmkyin ddddegikky faafhlkdtf piavvvddfg
      121 dffherscqe rygnprgrdl amvrtlalch naiifanktg pcrlllsdth ngdsprslfi
      181 ykrwirtift vkgddsgslc lkynkysesg sskgtktaky siafqyllle gitevddeq
//
LOCUS       XP_016706768             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706768
VERSION     XP_016706768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25410
     CDS             1..239
                     /gene="LOC107921429"
                     /coded_by="XM_016851279.2:233..952"
                     /db_xref="GeneID:107921429"
ORIGIN      
        1 miipntsyvl kngqsagtsg iprpngfidd slkdgqaqsv seqekyvaiv sagnfargav
       61 dlgksmlsvp agfnntnslh fnpafedvaa iavtineall dsnnhtavtf qgtsiskmdg
      121 vkgvnensdp gisfnsgigr vsggktrgsk gdwksnktlk gpsnrfkamg canskfpqil
      181 reyskefkln ilslleprvs gfeadsiiek lgldrthrve avgsrevfgl dgrsplmlr
//
LOCUS       XP_040942451             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942451
VERSION     XP_040942451.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086517.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=22001
     CDS             1..211
                     /gene="LOC107921429"
                     /coded_by="XM_041086517.1:232..867"
                     /db_xref="GeneID:107921429"
ORIGIN      
        1 miipntsyvl kngqsagtsg iprpngfidd slkdgqaqsv seqekyvaiv sagnfargav
       61 dlgksmlsvp agfnntnslh fnpafedvaa iavtineall dsnnhtavtf qgtsiskmdg
      121 vkgvnensdp gisfnsgigr vsggktrgsk gdwksnktlk gpsnrfkamv ssrvslagsm
      181 lmeadlisfk ldgqdakekv tkeieglgnd v
//
LOCUS       XP_016706516             154 aa            linear   PLN 06-AUG-2024
DEFINITION  organelle RRM domain-containing protein 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016706516
VERSION     XP_016706516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..154
                     /product="organelle RRM domain-containing protein 1,
                     chloroplastic"
                     /calculated_mol_wt=17622
     Region          45..126
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     CDS             1..154
                     /gene="LOC107921154"
                     /coded_by="XM_016851027.2:98..562"
                     /db_xref="GeneID:107921154"
ORIGIN      
        1 mkcssmwptt ltlsypspis lkyrfhksfn lslraslfny plasrifvrn lpystkessl
       61 qkefenfgqi aevsiakddf tkrskgyafi qytsqndall avenmdqqvf dgrmiyveia
      121 kpgkdrfrgy pktsgppttk qqlqqsndva dcwy
//
LOCUS       XP_040942453             819 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR-RED IMPAIRED RESPONSE 1 [Gossypium hirsutum].
ACCESSION   XP_040942453
VERSION     XP_040942453.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086519.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..819
                     /product="protein FAR-RED IMPAIRED RESPONSE 1"
                     /calculated_mol_wt=93571
     Region          26..810
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..819
                     /gene="LOC107922525"
                     /coded_by="XM_041086519.1:249..2708"
                     /db_xref="GeneID:107922525"
ORIGIN      
        1 mvdsssddrv rsssvdaarf hkeygldgle fdskeeafsf ykqyaksagf stiikasrrs
       61 risgkfidak fvctrygndp esplpafatt ipvkkkrgrl nrswsktdck agmhvkrrqd
      121 grwivcsfik ehnhdtfpdq gyysrghtpl algnsdvsat agrakkmhla tstqsgghkk
      181 ldhhtagdsn rfrscqllgl eegdlqvlld cfnhmqdenp nffyamdlne eqrlrnvfwi
      241 dakgrldygy fddvvfldtt yikndyklpv vpfigvnhhl qflllgcalv adqtkltyvw
      301 lmrawlramg gnapkviltd hdkalkaavv evfpdsrhcf clwhilskip eklgnvlgqh
      361 enfmakfdec isksymdeqf ekkwlelvda fnlrndlwfq slyedrkkwv ptymrgvfla
      421 gmstvqrsds vsslfdkylq rktmlkefld qyktilrekp eeeakadfet ghkppglksp
      481 slfekqmapl ythaifkkfq vevlggiach pmkereekgt mtfkvqdfek nqefivvwnd
      541 ttsdisclcr gfefngfpcr hmliilqlsg vqsipsqlil krwtkdakhs qttgkqsdvv
      601 etrmqryydl cqrafklgde gslsresyni ifnaleealg kcesvnytiq nitgpmsvet
      661 qgphhfeeen qnssttnevk rtkttlgegy peteisntgr cdswqqlgls nirvpslecs
      721 yesqesrhrm elhsrtlnsy fgtqqlmqgq lsstgpphda hcitqqring mgqlpfrlqs
      781 isscydiqdg lqdmdqpnag ssqllgmask klhskhisk
//
LOCUS       XP_016707824             529 aa            linear   PLN 06-AUG-2024
DEFINITION  coatomer subunit delta [Gossypium hirsutum].
ACCESSION   XP_016707824
VERSION     XP_016707824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="coatomer subunit delta"
                     /calculated_mol_wt=57782
     Region          4..133
                     /region_name="Delta_COP_N"
                     /note="delta subunit of the F-COPI complex, N-terminal
                     domain; cd14830"
                     /db_xref="CDD:341434"
     Region          283..526
                     /region_name="AP_delta-COPI_MHD"
                     /note="Mu homology domain (MHD) of adaptor protein (AP)
                     coat protein I (COPI) delta subunit; cd09254"
                     /db_xref="CDD:271162"
     CDS             1..529
                     /gene="LOC107922342"
                     /coded_by="XM_016852335.2:255..1844"
                     /db_xref="GeneID:107922342"
ORIGIN      
        1 mvvlaasvls ksgkvlvsrq fvdmtririe gllaafpklv gtgkqhtyve tenvryvyqp
       61 iealylllvt nkqsniledl eilrllsklv peycysldee gicktafeli fafdeviclg
      121 hkenvtvaqv kqycemeshe eklhklvlqs kinetkdvmk rkaseidksk idknkgdkgg
      181 fmsmgsgrie ssfsdmsiss sgsgfgsssg lgltadvdsf stkskgrqls satappkglg
      241 mqlgksqktn qfleslkaeg elivedvqpr agqarvaaaa ptdpitltae eklnvtlkrd
      301 ggisnfdvqg tlslqilnqe daliqvqtet ggnpgilfkt hpnmnkelfs nenilglkdp
      361 nrpfpsgsag daagvgllkw rmqsadesmv pltincwpsv sgnetyvsie yeasamfdlr
      421 nvvisvplpa lreapnvrqi dgewrydsrn svlewsilli dnsnrsgsme fvvppadssv
      481 ffpisvrfsa tstysdlkvv niiplrggga pspkfsqrtn litenyqvv
//
LOCUS       XP_016707337            1386 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NAP1 [Gossypium hirsutum].
ACCESSION   XP_016707337
VERSION     XP_016707337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851848.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1386
                     /product="protein NAP1"
                     /calculated_mol_wt=154601
     Region          76..1267
                     /region_name="Nckap1"
                     /note="Nck-associated protein 1; pfam09735"
                     /db_xref="CDD:462866"
     CDS             1..1386
                     /gene="LOC107922024"
                     /coded_by="XM_016851848.2:217..4377"
                     /db_xref="GeneID:107922024"
ORIGIN      
        1 maksrqhyss qdssvsprag rsrewegpsr wteylgldtt spfssrssry mnsdgqvqsl
       61 gvgshkglnm qwvaqlveva dglmakmyrl nqildypepi ghafseafwk asvfpnhpri
      121 ciflskkfpe hfsklqlerv dkaaldslsg naevhlqsle pwvqllldlm afreqalrli
      181 ldlsstvitl lphqnslilh afmdlfcsfv rvnlfseklp rkmmlqvynl lhamsrndrd
      241 cdfyhrliqf idsydpplkg lqedlnfvsp rigevleavg piiflstdtr klrnegflsp
      301 yhprypdilt nsahpmraqd lanvtayrew vllgylvcpd ellrvtsidi alvvlkenlv
      361 ltlfrdeyvl lhedyqlyvl prileskkma ksgrtkqkea dleysvakqv ekmigevleq
      421 aliscdaihh errillkqei grmvlfftdq psllapniqm vfsalalaqc eviwffqhvg
      481 iasskskvar mvpvdidpnd ptigflldgm dhlcclvrky iaairgyals ylsscagrir
      541 fllgtpgmva ldldatlktl fqqiinrlen ipkpqgenis aitcdlsgfr kdwlsilmiv
      601 tsarssinir hlekatvstg kegllsegna aynwsrcvde lesqlskhgs lrklyfyhqh
      661 ltavfrntmf gpegrpqhcc awlgvassfp ecaspivpee vtkigrdavl yvesliesim
      721 ggleglinil dseggfgale mqllpeqaaf ylnnasrvsi psakspkgav ayplpghesy
      781 pennnsikll eaamqrltnl csvlndmepi cvlnhvfvlr eymrecilgn frrrllsvlk
      841 tdndlqrpsi leslirrhmn iihlaeqhis mdltqgirev llletfsgpv sslhlfdrpa
      901 eqhtgsatev vcnwyieniv kdmsgagilf tpmhkcfkst rpvggyfaes vtdlgelqaf
      961 vrifggygvd rldtmmkeht aallncidts lrsnrellea vagsmhsgdr iereaclkqi
     1021 vdldtiigfc ieagqalafd kllaeaagav leegapliys llagvvkhip eeipekreir
     1081 rmrgvangva lagdhdsewv rsileeagga ndgswsllpy lfatsmtsni wnttgfnvdt
     1141 ggfnnnihcl arcinaviag seyvrlareh hqrqllsngh vgnadsldpd mrvsaeasik
     1201 samqlfikfs agivldslhe snrshlvakl vfldqlcdis lylprsslea hvpyailrsi
     1261 ysqyyanspl mpmallsasp rhspavslah aspimrqprg dstpqysand sgyfkgsssh
     1321 sqeqlydaes anlrgvenkh rnvrrsgpld ysssrkvkye gsssggtgps plprfavsrs
     1381 gpisyk
//
LOCUS       XP_040942454            1386 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NAP1 [Gossypium hirsutum].
ACCESSION   XP_040942454
VERSION     XP_040942454.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086520.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1386
                     /product="protein NAP1"
                     /calculated_mol_wt=154601
     Region          76..1267
                     /region_name="Nckap1"
                     /note="Nck-associated protein 1; pfam09735"
                     /db_xref="CDD:462866"
     CDS             1..1386
                     /gene="LOC107922024"
                     /coded_by="XM_041086520.1:293..4453"
                     /db_xref="GeneID:107922024"
ORIGIN      
        1 maksrqhyss qdssvsprag rsrewegpsr wteylgldtt spfssrssry mnsdgqvqsl
       61 gvgshkglnm qwvaqlveva dglmakmyrl nqildypepi ghafseafwk asvfpnhpri
      121 ciflskkfpe hfsklqlerv dkaaldslsg naevhlqsle pwvqllldlm afreqalrli
      181 ldlsstvitl lphqnslilh afmdlfcsfv rvnlfseklp rkmmlqvynl lhamsrndrd
      241 cdfyhrliqf idsydpplkg lqedlnfvsp rigevleavg piiflstdtr klrnegflsp
      301 yhprypdilt nsahpmraqd lanvtayrew vllgylvcpd ellrvtsidi alvvlkenlv
      361 ltlfrdeyvl lhedyqlyvl prileskkma ksgrtkqkea dleysvakqv ekmigevleq
      421 aliscdaihh errillkqei grmvlfftdq psllapniqm vfsalalaqc eviwffqhvg
      481 iasskskvar mvpvdidpnd ptigflldgm dhlcclvrky iaairgyals ylsscagrir
      541 fllgtpgmva ldldatlktl fqqiinrlen ipkpqgenis aitcdlsgfr kdwlsilmiv
      601 tsarssinir hlekatvstg kegllsegna aynwsrcvde lesqlskhgs lrklyfyhqh
      661 ltavfrntmf gpegrpqhcc awlgvassfp ecaspivpee vtkigrdavl yvesliesim
      721 ggleglinil dseggfgale mqllpeqaaf ylnnasrvsi psakspkgav ayplpghesy
      781 pennnsikll eaamqrltnl csvlndmepi cvlnhvfvlr eymrecilgn frrrllsvlk
      841 tdndlqrpsi leslirrhmn iihlaeqhis mdltqgirev llletfsgpv sslhlfdrpa
      901 eqhtgsatev vcnwyieniv kdmsgagilf tpmhkcfkst rpvggyfaes vtdlgelqaf
      961 vrifggygvd rldtmmkeht aallncidts lrsnrellea vagsmhsgdr iereaclkqi
     1021 vdldtiigfc ieagqalafd kllaeaagav leegapliys llagvvkhip eeipekreir
     1081 rmrgvangva lagdhdsewv rsileeagga ndgswsllpy lfatsmtsni wnttgfnvdt
     1141 ggfnnnihcl arcinaviag seyvrlareh hqrqllsngh vgnadsldpd mrvsaeasik
     1201 samqlfikfs agivldslhe snrshlvakl vfldqlcdis lylprsslea hvpyailrsi
     1261 ysqyyanspl mpmallsasp rhspavslah aspimrqprg dstpqysand sgyfkgsssh
     1321 sqeqlydaes anlrgvenkh rnvrrsgpld ysssrkvkye gsssggtgps plprfavsrs
     1381 gpisyk
//
LOCUS       XP_016706764             254 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HAT22 [Gossypium hirsutum].
ACCESSION   XP_016706764
VERSION     XP_016706764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="homeobox-leucine zipper protein HAT22"
                     /calculated_mol_wt=28181
     Site            order(105..108,110,127,133,146,148..149,152..153,155..157,
                     159..160)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          105..159
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(106,109,149,152..153,156)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          161..204
                     /region_name="HALZ"
                     /note="homeobox associated leucin zipper; smart00340"
                     /db_xref="CDD:128634"
     CDS             1..254
                     /gene="LOC107921422"
                     /coded_by="XM_016851275.2:349..1113"
                     /db_xref="GeneID:107921422"
ORIGIN      
        1 mgfddicssg lglglgwnvk enfsqsdhqq kkkkslvrde hffpsltlgp ssdddarkah
       61 gddqqassvt alssfsnssv kkegdvefer vssrvgdedd egchrkklrl tkhqsailed
      121 rfkehttlcp kqkqalaakl dlrprqvevw fqnrrartkl kqtevdcell kkccetltee
      181 nkrlqkelqe lkswkltasy cmqlpaaatl tmcpscerva nggdgppatt tsipftigpk
      241 shfinslshp saac
//
LOCUS       XP_016706800             212 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABC2a isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706800
VERSION     XP_016706800.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851311.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="ras-related protein RABC2a isoform X1"
                     /calculated_mol_wt=23195
     Region          12..212
                     /region_name="PLN03118"
                     /note="Rab family protein; Provisional"
                     /db_xref="CDD:215587"
     CDS             1..212
                     /gene="LOC107921463"
                     /coded_by="XM_016851311.2:276..914"
                     /db_xref="GeneID:107921463"
ORIGIN      
        1 mgsssgkssg sydlsfkill igdsgvgkss llvsfisasa edlaptigvd fkikfltvgg
       61 krlkltiwdt agqerfrtlt ssyyrgaqgi ilvydvtrre tftnlstvwa kevelystnq
      121 dcvkmlvgnk vdrdseravs reegmelake lgcmflecsa ktrknveqcf eglslkimev
      181 psfleegsai gkrnmlkhkp eyrghqgggc cs
//
LOCUS       XP_016706801             190 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABC2a isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706801
VERSION     XP_016706801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..190
                     /product="ras-related protein RABC2a isoform X2"
                     /calculated_mol_wt=20725
     Region          12..190
                     /region_name="PLN03118"
                     /note="Rab family protein; Provisional"
                     /db_xref="CDD:215587"
     CDS             1..190
                     /gene="LOC107921463"
                     /coded_by="XM_016851312.2:283..855"
                     /db_xref="GeneID:107921463"
ORIGIN      
        1 mgsssgkssg sydlsfkill igdsgvgkss llvsfisasa edlaptigvd fkikfltvgg
       61 krlkltiwdt vydvtrretf tnlstvwake velystnqdc vkmlvgnkvd rdseravsre
      121 egmelakelg cmflecsakt rknveqcfeg lslkimevps fleegsaigk rnmlkhkpey
      181 rghqgggccs
//
LOCUS       XP_040942456            1081 aa            linear   PLN 06-AUG-2024
DEFINITION  putative white-brown complex homolog protein 30 [Gossypium
            hirsutum].
ACCESSION   XP_040942456
VERSION     XP_040942456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086522.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1081
                     /product="putative white-brown complex homolog protein 30"
                     /calculated_mol_wt=118678
     Region          491..719
                     /region_name="ABCG_EPDR"
                     /note="Eye pigment and drug resistance transporter
                     subfamily G of the ATP-binding cassette superfamily;
                     cd03213"
                     /db_xref="CDD:213180"
     Site            528..535
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213180"
     Site            order(531..532,534..536,576,660..661,693)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213180"
     Site            573..576
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213180"
     Site            636..645
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213180"
     Site            656..661
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213180"
     Site            664..667
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213180"
     Site            689..695
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213180"
     Region          693..1080
                     /region_name="ABC2_membrane_7"
                     /note="ABC-2 type transporter; pfam19055"
                     /db_xref="CDD:465963"
     CDS             1..1081
                     /gene="LOC107921465"
                     /coded_by="XM_041086522.1:309..3554"
                     /db_xref="GeneID:107921465"
ORIGIN      
        1 mrgvirshfl hflllflssf pssrsldgdd ysetqnpavl pgvtdlihkr lsnlttllik
       61 digsdlgfci knaqedldga fnfsknmdfv tncikktkgd vtlrlctaae ikfyfdslfs
      121 kgaktgyvkv nkncnlkswv sgcepgwgcf adggqqidlk ntsympsrsq dcqpccegff
      181 cprglacmip cplgsycpla tlnkttgvcd pynyqippgk pnhscgtadi wadvgsssei
      241 fcsagsycpn tlnkitcskg hycrkgstsq iscfklttcn pntsnqnihg ygvmlfvgls
      301 lllliiynfs dqvistkerr qaksreaaak haretaqare rwkaakdiak kggwqaqlsk
      361 tfsraksqrk teqqkasgvg ksteapvppp pkvaeqtskg skekkkepgd ltkmlhsled
      421 dpksnegfdl niggknvkkq apkgkqlhtq sqifkyaygq iekekaqqnk nltfsgiism
      481 atdndirtrp mieiyfkdlt ltlkgknknl lrsvtgklmp grvsavmgps gagkttflsa
      541 ltgktaagcs vtglilvngk nepiqayrki igyvpqddiv hgnltveenl rfsarcrlsa
      601 dlakpdkvlv iervieslgl qavrdslvgt vekrgisggq rkrvnvglem vmepsllild
      661 epttgldsss sqlllralrr ealegvnicm vlhqpsytlf kmfddlilla kgglvaylgp
      721 vkkveeyfss iginvpdrvn ppdhlidile giekpatvtr eqlpvrwmlh ngypvpldml
      781 dlaeglstps gsnpnnsgga aggqafagdl pddakinvsk skdlsnrrsp gilrqyryfl
      841 grilkqrlre gqmqavdlmi lllagaclgt lakvtdetld nagytfsvia vsllsmiaal
      901 rtysldklqy kretesgiss lahflskdti dlfniiikpv aylsmfyffn nprssfqdny
      961 vilmalvycv tgmayvlais fapslaqlwa vlvpvvltlv ankgkdsmiq kyfgkfcytk
     1021 waleafvian aekysgvwll trckslesgg ynlhdwklcl iilivngvia rilafiilvt
     1081 r
//
LOCUS       XP_016706771             162 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 18, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016706771
VERSION     XP_016706771.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851282.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706771.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="nudix hydrolase 18, mitochondrial"
                     /calculated_mol_wt=18782
     Region          22..151
                     /region_name="NUDIX_DIPP2_like_Nudt4"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; cd04666"
                     /db_xref="CDD:467551"
     CDS             1..162
                     /gene="LOC107921433"
                     /coded_by="XM_016851282.2:317..805"
                     /db_xref="GeneID:107921433"
ORIGIN      
        1 mvclvsrtgr hlqrydnlgr rqvvgcipyr fkcssdgtis delevlviss qkgqkmmfpk
       61 ggweldesie eaalresiee agvignvece lgkwyfisks hgtfyegymf pllvkeeldf
      121 wpeqnvrqrt wmnvkeardv cqhwwmkeal dilverlasl qq
//
LOCUS       XP_040942457             262 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942457
VERSION     XP_040942457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086523.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=28832
     CDS             1..262
                     /gene="LOC107945984"
                     /coded_by="XM_041086523.1:326..1114"
                     /db_xref="GeneID:107945984"
ORIGIN      
        1 msnivmphlg fglskmtlla tiiskssgvs cqcklsrssl elinknslse vsrtfttpdv
       61 mgcclkgflq ivmhgkslqq egvagnlhyn rsgaskkgtg gglnltngtq deiqdpsvhp
      121 wrgltttrdd sltlldcylc pksfkglqnv fysararere rellypgacg gggrgwisqg
      181 iasygrglgt retcalhtar lscdtlvdfw salgeetres llrmkeedfi erlmyrcvyg
      241 sslrlnvfhf lycsagkrye vr
//
LOCUS       XP_016735652             262 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016735652
VERSION     XP_016735652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016880163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=28832
     CDS             1..262
                     /gene="LOC107945984"
                     /coded_by="XM_016880163.2:647..1435"
                     /db_xref="GeneID:107945984"
ORIGIN      
        1 msnivmphlg fglskmtlla tiiskssgvs cqcklsrssl elinknslse vsrtfttpdv
       61 mgcclkgflq ivmhgkslqq egvagnlhyn rsgaskkgtg gglnltngtq deiqdpsvhp
      121 wrgltttrdd sltlldcylc pksfkglqnv fysararere rellypgacg gggrgwisqg
      181 iasygrglgt retcalhtar lscdtlvdfw salgeetres llrmkeedfi erlmyrcvyg
      241 sslrlnvfhf lycsagkrye vr
//
LOCUS       XP_016735661             202 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016735661
VERSION     XP_016735661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016880172.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=22391
     CDS             1..202
                     /gene="LOC107945984"
                     /coded_by="XM_016880172.2:389..997"
                     /db_xref="GeneID:107945984"
ORIGIN      
        1 mgcclkgflq ivmhgkslqq egvagnlhyn rsgaskkgtg gglnltngtq deiqdpsvhp
       61 wrgltttrdd sltlldcylc pksfkglqnv fysararere rellypgacg gggrgwisqg
      121 iasygrglgt retcalhtar lscdtlvdfw salgeetres llrmkeedfi erlmyrcvyg
      181 sslrlnvfhf lycsagkrye vr
//
LOCUS       XP_016735642             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016735642
VERSION     XP_016735642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016880153.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14733
     CDS             1..128
                     /gene="LOC107945975"
                     /coded_by="XM_016880153.2:76..462"
                     /db_xref="GeneID:107945975"
ORIGIN      
        1 msilwekset wrwlvrrtrd skpfflafat lcgvvpgvig ygvmqltnsr nphlearlre
       61 narpeslmmg kvnqerlaey lgelqrkedt ndryvaalrg etltrtpyqr iqpvpkqnae
      121 knnsneka
//
LOCUS       XP_040942458             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942458
VERSION     XP_040942458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086524.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16589
     CDS             1..150
                     /gene="LOC107922445"
                     /coded_by="XM_041086524.1:37..489"
                     /db_xref="GeneID:107922445"
ORIGIN      
        1 mgmgagaivh maedllsaia yhlvvvaata ghlhivilvv ihlmlmeika gpelsksgmi
       61 smkticniva ligsvwkrdl cylcsfrdne vvrtcgfawl plckvfqplk lvpwtpfcda
      121 ccqqhiklgs ffvasycyll lfiyypfmlt
//
LOCUS       XP_016707975             115 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ22A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707975
VERSION     XP_016707975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852486.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="serine/arginine-rich splicing factor RSZ22A
                     isoform X2"
                     /calculated_mol_wt=12989
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          90..>112
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..115
                     /gene="LOC107922445"
                     /coded_by="XM_016852486.2:230..577"
                     /db_xref="GeneID:107922445"
ORIGIN      
        1 msrvyvrnld prvmerdled efrifgvlrs vwvarrppgy afiefddrrd amdaireldg
       61 kngwrvelsh nskgvggrgg rrgggedlkc yecgepghfv recrsrigsw gdgng
//
LOCUS       XP_040942459             115 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ22A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942459
VERSION     XP_040942459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086525.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="serine/arginine-rich splicing factor RSZ22A
                     isoform X2"
                     /calculated_mol_wt=12989
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          90..>112
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..115
                     /gene="LOC107922445"
                     /coded_by="XM_041086525.1:258..605"
                     /db_xref="GeneID:107922445"
ORIGIN      
        1 msrvyvrnld prvmerdled efrifgvlrs vwvarrppgy afiefddrrd amdaireldg
       61 kngwrvelsh nskgvggrgg rrgggedlkc yecgepghfv recrsrigsw gdgng
//
LOCUS       XP_040942460             115 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ22A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942460
VERSION     XP_040942460.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086526.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="serine/arginine-rich splicing factor RSZ22A
                     isoform X2"
                     /calculated_mol_wt=12989
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          90..>112
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..115
                     /gene="LOC107922445"
                     /coded_by="XM_041086526.1:230..577"
                     /db_xref="GeneID:107922445"
ORIGIN      
        1 msrvyvrnld prvmerdled efrifgvlrs vwvarrppgy afiefddrrd amdaireldg
       61 kngwrvelsh nskgvggrgg rrgggedlkc yecgepghfv recrsrigsw gdgng
//
LOCUS       XP_040942461            1227 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipid-transporting ATPase 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942461
VERSION     XP_040942461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086527.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1227
                     /product="phospholipid-transporting ATPase 3 isoform X1"
                     /calculated_mol_wt=139723
     Region          58..1139
                     /region_name="ATPase-Plipid"
                     /note="phospholipid-translocating P-type ATPase, flippase;
                     TIGR01652"
                     /db_xref="CDD:273734"
     Site            order(423..425,581,604..606,671,718..720,829,832,835,855,
                     858)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1227
                     /gene="LOC107890069"
                     /coded_by="XM_041086527.1:333..4016"
                     /db_xref="GeneID:107890069"
ORIGIN      
        1 msgwdnirss trsqqgrshs lnqrepsrtv tlgrvqpqap afrtiycndr danfahryrg
       61 nsvsttkynf ftflpkglye qfrrvanlyf lmvsilsatp yspvhpvtnv vplslvllvs
      121 likeafedwk rfqndmains tpvdvlqdqr wesipwkklq vgdiirvkqd gffpadmlll
      181 astnadgvcy ietanldget nlkirkaler twdyvtpeka cefkgevlce qpnnslytft
      241 gnlvidnqtl plspnqillr gcslkntefv vgvviftghe tkvmmnsmnv pskrstlerk
      301 ldkliltlfg tlftmcliga igsgvfidrk yyflglsksv edqfnpnrrf lvvlltmltl
      361 ltlystiipi slyvsiemvk fiqstqfink dlnmyhaetn tpalartsnl neelgqveyi
      421 fsdktgtltr nlmeffkcti ggeiygtgmt eiergvaerk gikvpevpts insvrekgfn
      481 fddvrlmrga wrnepnpeac keffrclaic htvlpegdes pekikyqaas pdeaalvlaa
      541 khfgfffyrr tptmiyvres hvermgkiqd vsyeilnvle fnstrkrqsv vcrypdgrlv
      601 lyckgadtvi yerlvggsdd lkkvtrehle ifgsaglrtl claykdlapd vyeswnekfi
      661 qaksslrdre rkldevaeli ekdliligat aiedklqegv pdcietlsra gikiwvltgd
      721 kmetainiay acnllnnemk qfiissetda ireveergdq veiarfikee vkkqlkkcld
      781 eaqqyfhsvs gpklaliidg kclmyaldps lrimllnlsl ncssvvccrv splqkaqvts
      841 lvkkgarkit lsigdgandv smiqaahigv gisglegmqa vmasdfaiaq frflkdlllv
      901 hgrwsyirlc kvvtyffykn ltftltqfwf tfytgfsgqr fyddwfqsly nviftalpvi
      961 ivglfdkdvs sslskrypel ykegiknmff kwrvvaiwaf favyqslvfy yfvtvsssts
     1021 qgssgkmfgl wdvstmaftc vvvtvnlrll micnsitswh yisvggsiva wflfiflysg
     1081 imtpydrqen ifwviyvlms tfyfyitlll vpvaallgdf lylgvqrwff pydyqivqei
     1141 hkdeaddsgr tdllgiynql tpdearsyal sqlprelskh tgfafdspgy esffasqlgv
     1201 yapqkawdva rrasmrskpk pkpnkin
//
LOCUS       XP_040942462            1205 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipid-transporting ATPase 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942462
VERSION     XP_040942462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086528.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1205
                     /product="phospholipid-transporting ATPase 3 isoform X2"
                     /calculated_mol_wt=137199
     Region          60..1117
                     /region_name="ATPase-Plipid"
                     /note="phospholipid-translocating P-type ATPase, flippase;
                     TIGR01652"
                     /db_xref="CDD:273734"
     Site            order(401..403,559,582..584,649,696..698,807,810,813,833,
                     836)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1205
                     /gene="LOC107890069"
                     /coded_by="XM_041086528.1:333..3950"
                     /db_xref="GeneID:107890069"
ORIGIN      
        1 msgwdnirss trsqqgrshs lnqrepsrtv tlgrvqpqap afrtiycndr danfahryrf
       61 rrvanlyflm vsilsatpys pvhpvtnvvp lslvllvsli keafedwkrf qndmainstp
      121 vdvlqdqrwe sipwkklqvg diirvkqdgf fpadmlllas tnadgvcyie tanldgetnl
      181 kirkalertw dyvtpekace fkgevlceqp nnslytftgn lvidnqtlpl spnqillrgc
      241 slkntefvvg vviftghetk vmmnsmnvps krstlerkld kliltlfgtl ftmcligaig
      301 sgvfidrkyy flglsksved qfnpnrrflv vlltmltllt lystiipisl yvsiemvkfi
      361 qstqfinkdl nmyhaetntp alartsnlne elgqveyifs dktgtltrnl meffkctigg
      421 eiygtgmtei ergvaerkgi kvpevptsin svrekgfnfd dvrlmrgawr nepnpeacke
      481 ffrclaicht vlpegdespe kikyqaaspd eaalvlaakh fgfffyrrtp tmiyvreshv
      541 ermgkiqdvs yeilnvlefn strkrqsvvc rypdgrlvly ckgadtviye rlvggsddlk
      601 kvtrehleif gsaglrtlcl aykdlapdvy eswnekfiqa ksslrdrerk ldevaeliek
      661 dliligatai edklqegvpd cietlsragi kiwvltgdkm etainiayac nllnnemkqf
      721 iissetdair eveergdqve iarfikeevk kqlkkcldea qqyfhsvsgp klaliidgkc
      781 lmyaldpslr imllnlslnc ssvvccrvsp lqkaqvtslv kkgarkitls igdgandvsm
      841 iqaahigvgi sglegmqavm asdfaiaqfr flkdlllvhg rwsyirlckv vtyffyknlt
      901 ftltqfwftf ytgfsgqrfy ddwfqslynv iftalpviiv glfdkdvsss lskrypelyk
      961 egiknmffkw rvvaiwaffa vyqslvfyyf vtvssstsqg ssgkmfglwd vstmaftcvv
     1021 vtvnlrllmi cnsitswhyi svggsivawf lfiflysgim tpydrqenif wviyvlmstf
     1081 yfyitlllvp vaallgdfly lgvqrwffpy dyqivqeihk deaddsgrtd llgiynqltp
     1141 dearsyalsq lprelskhtg fafdspgyes ffasqlgvya pqkawdvarr asmrskpkpk
     1201 pnkin
//
LOCUS       XP_040942463            2149 aa            linear   PLN 06-AUG-2024
DEFINITION  cell polarity protein mor2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942463
VERSION     XP_040942463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086529.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2149
                     /product="cell polarity protein mor2 isoform X1"
                     /calculated_mol_wt=242122
     Region          85..585
                     /region_name="MOR2-PAG1_N"
                     /note="Cell morphogenesis N-terminal; pfam14222"
                     /db_xref="CDD:464107"
     Region          622..1738
                     /region_name="MOR2-PAG1_mid"
                     /note="Cell morphogenesis central region; pfam14228"
                     /db_xref="CDD:433790"
     Region          1763..2038
                     /region_name="MOR2-PAG1_C"
                     /note="Cell morphogenesis C-terminal; pfam14225"
                     /db_xref="CDD:464109"
     CDS             1..2149
                     /gene="LOC107921482"
                     /coded_by="XM_041086529.1:152..6601"
                     /db_xref="GeneID:107921482"
ORIGIN      
        1 mkagsaakli vdallqrflp larrrietaq vqdgqclrps dpayeqvlds lamvaqhtpv
       61 plleallrwr eseppkgand astfqrklav ecifcsacir fveccpqegl teklwsglen
      121 fvfdwlinad rvvsqvdyps lvdlrsllld lvaqllgals rirftsvter ffmesntrri
      181 dssvarsetl siingmrylk lgvkteggln asasfvakan plnraphkrk selyhalcnm
      241 lsnilaplad ggknqwpptg vdlaitlwye avgrirenlm hwmdkqskhi gvgyplvtll
      301 lclgdpqifh snlsshmeql ykllrdknhr fmsldclhkv lrfylnvhaa nqppnriwdy
      361 ldsvtsqlli llrkgmltqd iqhdklvefc vtiaehnldf amnhmilell kqdspseakv
      421 iglrallaiv mspssqhvgl eifkghdigh ympkvkaaie silrschrty sqalltssrt
      481 tidavtkeks qgylfrsalk cipylieevg rsdkiteiip qhgisidpgv reeavqvlnr
      541 ivrylphrrf avirgmanfi lrlpddfpll iqtslgrlle lmrfwracli ddrleqdaqd
      601 vkrtvqhnta fkkssfhqqa eamefrasei davgliflss vdsqirhtal ellrcaralr
      661 ndirdlslhe qldynrryev epifiidvle ehgedivqsc ywdsarlfdy rresdaipsd
      721 vslqsiifes pdknrwarcl selvkyaaei cptsvldakv evlqrlahit paelggkahq
      781 sqdldnkldq wlmyamfvcs cppdskeags ivatrelyhl ifpslksgse ahihsatmal
      841 ghshleccei mfselasfve evssetegkp kwksqkqtrr edlrvhiani yrtvaeniwp
      901 gflgrkpvfr rhylrfiedt skqiaiasad sfqetqplry alasvlrsla pefvdsksdr
      961 fdlryrkklf dlllswcdep gsswgkdgss dyrreveryk alqhrskdsv ekisfdkdss
     1021 eqtdtiqwas mtamasllyg pcfddnarkm sgrvivwins lfnepaakap ygyspdprtp
     1081 syskhtgegr gaasrdrhkg ghhrvalakl alknlllnnl dlfpacidqc yysdpaiadg
     1141 yfsvlaevym rqeipncetq rllslilykv vdpsrqirdd alqmletlsl rewaedgieg
     1201 sgsyraavvg nlpdsyqqfq yklscklakd hpelsqllce eimqrqldav diiaqhqvlt
     1261 cmapwienln fwklkdsgws erllkslyyv twrhgdqfpd eieklwstva skprnispil
     1321 dflitkgied cdsnasteis gafatyfsva krvslylari cpqrtidhlv yqlsqrmled
     1381 siepirpsgn radangnfil efsqgpataq iasfadsqsh mspllvrgsf dgplrntsgs
     1441 lswrppgvav rnssgslism ppelsivpgt agrsaqllpg lvnmpgplmg awnstgslrs
     1501 rhasrdsgdy lidtpnsved imqsgvgmlg vnakelqsal qgnqqhsltr adialillae
     1561 iayendedfr ehlpllfhvt fvsmdssedi vlehcqhllv nllyslagrh lelyevennd
     1621 genkqqvvsl ikyvqskrgs mmwenedstv trtdlpsasl lsalvqsmvd aiffqgdlre
     1681 twgvealkwa mectsrhlac rshqiyralr psvtsdtcvl llrclhrclg npvphvlgfi
     1741 meilltlqvm venmdpekvi lfpqlfwgcv ammhtdfihi ycqvlelfsr vidrlsfrdr
     1801 tienvllssm prdelsnvdi gdfqrmesrl ydlpatsgnl pafegvqplv lkglmstvsh
     1861 gvaievlsrm tvhscdsifg dretrllmhi tgllpwiclq lskdplvgpa splqqqyhka
     1921 csvaanisiw cqaesmddla tvfmaysrge iksidnllac vspllcnewf pkhsalafgh
     1981 llrllergpv eyqrvillml kalllhtpid taqipymyai vsqlvesslc wealsvleal
     2041 fqsctsltts hpyesgsfen gtdekrlasq tsfkarggtl qygfgacsgi sstsstesgm
     2101 tprevalqnt rmilgrvlds calgrrreyr rlvpfvttig tpypaglhl
//
LOCUS       XP_040942464            1760 aa            linear   PLN 06-AUG-2024
DEFINITION  protein furry isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942464
VERSION     XP_040942464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086530.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1760
                     /product="protein furry isoform X2"
                     /calculated_mol_wt=198850
     Region          85..585
                     /region_name="MOR2-PAG1_N"
                     /note="Cell morphogenesis N-terminal; pfam14222"
                     /db_xref="CDD:464107"
     Region          622..1738
                     /region_name="MOR2-PAG1_mid"
                     /note="Cell morphogenesis central region; pfam14228"
                     /db_xref="CDD:433790"
     CDS             1..1760
                     /gene="LOC107921482"
                     /coded_by="XM_041086530.1:152..5434"
                     /db_xref="GeneID:107921482"
ORIGIN      
        1 mkagsaakli vdallqrflp larrrietaq vqdgqclrps dpayeqvlds lamvaqhtpv
       61 plleallrwr eseppkgand astfqrklav ecifcsacir fveccpqegl teklwsglen
      121 fvfdwlinad rvvsqvdyps lvdlrsllld lvaqllgals rirftsvter ffmesntrri
      181 dssvarsetl siingmrylk lgvkteggln asasfvakan plnraphkrk selyhalcnm
      241 lsnilaplad ggknqwpptg vdlaitlwye avgrirenlm hwmdkqskhi gvgyplvtll
      301 lclgdpqifh snlsshmeql ykllrdknhr fmsldclhkv lrfylnvhaa nqppnriwdy
      361 ldsvtsqlli llrkgmltqd iqhdklvefc vtiaehnldf amnhmilell kqdspseakv
      421 iglrallaiv mspssqhvgl eifkghdigh ympkvkaaie silrschrty sqalltssrt
      481 tidavtkeks qgylfrsalk cipylieevg rsdkiteiip qhgisidpgv reeavqvlnr
      541 ivrylphrrf avirgmanfi lrlpddfpll iqtslgrlle lmrfwracli ddrleqdaqd
      601 vkrtvqhnta fkkssfhqqa eamefrasei davgliflss vdsqirhtal ellrcaralr
      661 ndirdlslhe qldynrryev epifiidvle ehgedivqsc ywdsarlfdy rresdaipsd
      721 vslqsiifes pdknrwarcl selvkyaaei cptsvldakv evlqrlahit paelggkahq
      781 sqdldnkldq wlmyamfvcs cppdskeags ivatrelyhl ifpslksgse ahihsatmal
      841 ghshleccei mfselasfve evssetegkp kwksqkqtrr edlrvhiani yrtvaeniwp
      901 gflgrkpvfr rhylrfiedt skqiaiasad sfqetqplry alasvlrsla pefvdsksdr
      961 fdlryrkklf dlllswcdep gsswgkdgss dyrreveryk alqhrskdsv ekisfdkdss
     1021 eqtdtiqwas mtamasllyg pcfddnarkm sgrvivwins lfnepaakap ygyspdprtp
     1081 syskhtgegr gaasrdrhkg ghhrvalakl alknlllnnl dlfpacidqc yysdpaiadg
     1141 yfsvlaevym rqeipncetq rllslilykv vdpsrqirdd alqmletlsl rewaedgieg
     1201 sgsyraavvg nlpdsyqqfq yklscklakd hpelsqllce eimqrqldav diiaqhqvlt
     1261 cmapwienln fwklkdsgws erllkslyyv twrhgdqfpd eieklwstva skprnispil
     1321 dflitkgied cdsnasteis gafatyfsva krvslylari cpqrtidhlv yqlsqrmled
     1381 siepirpsgn radangnfil efsqgpataq iasfadsqsh mspllvrgsf dgplrntsgs
     1441 lswrppgvav rnssgslism ppelsivpgt agrsaqllpg lvnmpgplmg awnstgslrs
     1501 rhasrdsgdy lidtpnsved imqsgvgmlg vnakelqsal qgnqqhsltr adialillae
     1561 iayendedfr ehlpllfhvt fvsmdssedi vlehcqhllv nllyslagrh lelyevennd
     1621 genkqqvvsl ikyvqskrgs mmwenedstv trtdlpsasl lsalvqsmvd aiffqgdlre
     1681 twgvealkwa mectsrhlac rshqiyralr psvtsdtcvl llrclhrclg npvphvlgfi
     1741 meilltlqvm venmdpeknn
//
LOCUS       XP_016706712             721 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK12 [Gossypium
            hirsutum].
ACCESSION   XP_016706712
VERSION     XP_016706712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..721
                     /product="proline-rich receptor-like protein kinase
                     PERK12"
                     /calculated_mol_wt=77353
     Region          366..634
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(366..370,374,386,388,417,433..436,440,442,484,486,
                     488..489,491,502,505,522..525)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(366..370,374,386,388,417,433..436,440,484,486,
                     488..489,491,502)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(370,440,442,484,486,488,505,522..525)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(501..508,518..525)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..721
                     /gene="LOC107921352"
                     /coded_by="XM_016851223.2:649..2814"
                     /db_xref="GeneID:107921352"
ORIGIN      
        1 msesgggssp pamsgssppa sgagnetnkn tptapsptst stsspppppd dssnnqsfse
       61 kkspetsppp apqenesppp psssstpsss kpppspqtpk qqqsppatpq tqnppkqqqq
      121 krqsppapnt hskessqsss ggssssssss pdnstkssps pprpspgtsq sqssanstss
      181 spqisssapa ngssttssst sspkalgptt lstskspssn ssdgsspsgg snnskqnnvs
      241 ghdktlnyeg viaatvvgvl vvvfiilffy lrgrkknrks pyanynrppp tnflvtsdaq
      301 vghspqhdaf hynsqlhgqe ssmvnspqke qnyhgpdsgi magsktyfty eelmemtngf
      361 arqniigegg fgcvfkgwma dgrvvavkql kagsgqgere fraeveiisr vhhrhlvslv
      421 gysmaekqrl liyefvpnnt lehhlhakel sllewdkrvk ialgaakgla ylhedchpki
      481 ihrdiksani llednfeakv adfglarlnd tsqthvstrv mgtfgylape yassgkltdr
      541 sdvysfgvvl lelitgrkpi dstqplgdes lvewarplli halesgdfge lidprlkkhy
      601 vksemvrmve aaaacvrhss skrprmalvv raldfegdpd lsngvkygds iaydsgkyse
      661 eiaefrrmgl sstensseid mysseynske mergqsdfwk sqnssgdyts geletralkt
      721 r
//
LOCUS       XP_016708010             361 aa            linear   PLN 06-AUG-2024
DEFINITION  purple acid phosphatase 8 [Gossypium hirsutum].
ACCESSION   XP_016708010
VERSION     XP_016708010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852521.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..361
                     /product="purple acid phosphatase 8"
                     /calculated_mol_wt=40713
     Region          70..345
                     /region_name="MPP_ACP5"
                     /note="Homo sapiens acid phosphatase 5 and related
                     proteins, metallophosphatase domain; cd07378"
                     /db_xref="CDD:277324"
     Site            order(77,110,113,148,244,253,279,281)
                     /site_type="active"
                     /db_xref="CDD:277324"
     Site            order(77,110,113,148,244,279,281)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277324"
     Site            154
                     /site_type="other"
                     /note="N-glycosylation site [posttranslational
                     modification]"
                     /db_xref="CDD:277324"
     CDS             1..361
                     /gene="LOC107922472"
                     /coded_by="XM_016852521.2:180..1265"
                     /db_xref="GeneID:107922472"
ORIGIN      
        1 mawiaglfis fstlpclptl tsfhinmvvp tkkamnqrla swtlvvglfv vscvaelerf
       61 ehagkpdgsl sflvvgdwgr rghynqsqva fqmgkigeql didfiistgd nfydngltgv
      121 ddplfhqsft diytapslqk qwynvlgnhd yrgnaeaqls piltkmdnrw lclrsfvlna
      181 gpeiaefffm dttpfvtkyf tdpedhvydw kailprekyl nnllmevesa lgesrakwki
      241 vvghhaiksa ghhgnakeln ihllpllqty dvdlyinghd hclqhisssd sgtqfmtsgg
      301 gskawrgdvs wwnpqelkfy hdgqgfmsve mtptevsikf ydvfgnvlhn wssskqlsfa
      361 i
//
LOCUS       XP_016707782             390 aa            linear   PLN 06-AUG-2024
DEFINITION  putative clathrin assembly protein At1g25240 [Gossypium hirsutum].
ACCESSION   XP_016707782
VERSION     XP_016707782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="putative clathrin assembly protein At1g25240"
                     /calculated_mol_wt=44658
     Region          32..282
                     /region_name="VHS_ENTH_ANTH"
                     /note="VHS, ENTH and ANTH domain superfamily; cl02544"
                     /db_xref="CDD:470608"
     Site            order(39,49,51..52)
                     /site_type="other"
                     /note="putative PtdIns(4,5)P2-binding site [chemical
                     binding]"
                     /db_xref="CDD:340784"
     CDS             1..390
                     /gene="LOC107922311"
                     /coded_by="XM_016852293.2:243..1415"
                     /db_xref="GeneID:107922311"
ORIGIN      
        1 maiwkratga ikdknslvla kfitrgafgd hdleaaiika tshdehdidk rntrmlfswi
       61 raspntlcpl vralsrrmek trswvvaikg lmlvhglihc kvpdarkmgr lpfdfssfsd
      121 rhsrlsktwg fnifirqyfv flderavvwl ldenktaedv plivrqllkl rkrqclldml
      181 lkirpradnm kvplileamd cviieifdvy sricseiakv lmqvhsvgkl eaamaleilr
      241 katsqgaqls qyfefckeyg vlkanefhkv teipeedvqe leriingvsd ktyknddfke
      301 ndqmatvvre ennaivehse likgglktti tdkwevfhdn inlngehids ffnesngsad
      361 qeatvsdlpl ipidhmavhy pfeipdlisf
//
LOCUS       XP_016707783             282 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BASIC PENTACYSTEINE2 [Gossypium hirsutum].
ACCESSION   XP_016707783
VERSION     XP_016707783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..282
                     /product="protein BASIC PENTACYSTEINE2"
                     /calculated_mol_wt=31636
     Region          1..282
                     /region_name="GAGA_bind"
                     /note="GAGA binding protein-like family; pfam06217"
                     /db_xref="CDD:461854"
     CDS             1..282
                     /gene="LOC107922313"
                     /coded_by="XM_016852294.2:236..1084"
                     /db_xref="GeneID:107922313"
ORIGIN      
        1 mdddalnmrn wgyyepsfkg hlglqlmssm aerdtksfip mrnpnlmvtp naafhprdci
       61 vseapnpmny vrdswisqre kffnmlpgis pnygilpets aahslpilqp spnsstrder
      121 vvgrveeppa tkesvelkkr qsesapktpk tkkprkpkdn tnssvqrvkp akksmdikin
      181 gydmdisgip ipvcsctgtp qqcyrwgcgg wqsaccttnv smyplpmstk rrgariagrk
      241 msqgafkkvl eklaaenynf nnpidlrthw arhgtnkfvt ir
//
LOCUS       XP_016707784             282 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BASIC PENTACYSTEINE2 [Gossypium hirsutum].
ACCESSION   XP_016707784
VERSION     XP_016707784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..282
                     /product="protein BASIC PENTACYSTEINE2"
                     /calculated_mol_wt=31636
     Region          1..282
                     /region_name="GAGA_bind"
                     /note="GAGA binding protein-like family; pfam06217"
                     /db_xref="CDD:461854"
     CDS             1..282
                     /gene="LOC107922313"
                     /coded_by="XM_016852295.2:573..1421"
                     /db_xref="GeneID:107922313"
ORIGIN      
        1 mdddalnmrn wgyyepsfkg hlglqlmssm aerdtksfip mrnpnlmvtp naafhprdci
       61 vseapnpmny vrdswisqre kffnmlpgis pnygilpets aahslpilqp spnsstrder
      121 vvgrveeppa tkesvelkkr qsesapktpk tkkprkpkdn tnssvqrvkp akksmdikin
      181 gydmdisgip ipvcsctgtp qqcyrwgcgg wqsaccttnv smyplpmstk rrgariagrk
      241 msqgafkkvl eklaaenynf nnpidlrthw arhgtnkfvt ir
//
LOCUS       XP_016707137             299 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707137
VERSION     XP_016707137.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851648.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707137.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..299
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34186
     Region          38..296
                     /region_name="DUF868"
                     /note="Plant protein of unknown function (DUF868);
                     pfam05910"
                     /db_xref="CDD:428668"
     CDS             1..299
                     /gene="LOC107921802"
                     /coded_by="XM_016851648.2:137..1036"
                     /db_xref="GeneID:107921802"
ORIGIN      
        1 mrsiascyne haikvsdsyc srpsnqpclt ysftpstptt vkciykakis sqrnllialt
       61 wcnnllgrgl tiavgetpkk fdpnshhlsk nkgsktfkac nseievfwdv snaqymtgpe
      121 pstrfslfvl vdsqlclslg diihtnneek atsnfslvsr tevfigttsv fstkaqfcee
      181 glvheilikc neeyeekqkv wrnpelcvti dkkkvfqvkr lrwnfrgnqv ifldgllidm
      241 mwdlhdwlfn rtskcavfmf rtrsgldsrl wleeknakfg ehqergefsl licacknld
//
LOCUS       XP_040942465             126 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942465
VERSION     XP_040942465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086531.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..126
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13887
     Region          22..58
                     /region_name="zf-BED"
                     /note="BED zinc finger; cl02703"
                     /db_xref="CDD:445891"
     CDS             1..126
                     /gene="LOC121213657"
                     /coded_by="XM_041086531.1:38..418"
                     /db_xref="GeneID:121213657"
ORIGIN      
        1 mppreefptk glegapsndi gwhfgtpvsn argsivcklc gkvvkggitr fkehiahktg
       61 nvapcpnvtg viresmmnvl kesntkkidk krrkdeflsq ltkeedeheg fidevsairq
      121 atresi
//
LOCUS       XP_016706270             159 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1A [Gossypium hirsutum].
ACCESSION   XP_016706270
VERSION     XP_016706270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850781.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="ubiquitin-conjugating enzyme E2 variant 1A"
                     /calculated_mol_wt=17810
     Region          8..141
                     /region_name="UEV_UBE2V"
                     /note="ubiquitin E2 variant (UEV) domain of
                     ubiquitin-conjugating enzyme E2 variant 1, 2 and related
                     proteins; cd23807"
                     /db_xref="CDD:467427"
     CDS             1..159
                     /gene="LOC107920950"
                     /coded_by="XM_016850781.2:3150..3629"
                     /db_xref="GeneID:107920950"
ORIGIN      
        1 mgsegscvvv prsfrlleel ergekgigdg tvsygmddad diymqswtgt iigppntvhe
       61 gciyqlklfc gkdypdnpps vrfqtrinmt cvnqetgvve pslfpmlanw qreytmedil
      121 tqlkkemmsp qnrklaqppe gneearldqk glplkccif
//
LOCUS       XP_016706606             202 aa            linear   PLN 06-AUG-2024
DEFINITION  probable peroxygenase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706606
VERSION     XP_016706606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="probable peroxygenase 5 isoform X1"
                     /calculated_mol_wt=22669
     Region          25..193
                     /region_name="Caleosin"
                     /note="Caleosin related protein; pfam05042"
                     /db_xref="CDD:428275"
     CDS             1..202
                     /gene="LOC107921238"
                     /coded_by="XM_016851117.2:320..928"
                     /db_xref="GeneID:107921238"
ORIGIN      
        1 mafsmppeal legvgdagaa kpsgseqsvl ekhvaffdrn hdgivypwet fegfraigag
       61 yllsmtgafl ihfalssktr pgkypspffp ievknihlak hgsdsgvyds dgrfvslkfe
      121 eifrkfarth gnaltsgelm amlkanrepq dykgwigswt ewmtlynlck dnngllrkei
      181 vkgvydgslf ermerdrkph rk
//
LOCUS       XP_016706607             197 aa            linear   PLN 06-AUG-2024
DEFINITION  probable peroxygenase 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706607
VERSION     XP_016706607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="probable peroxygenase 4 isoform X2"
                     /calculated_mol_wt=22270
     Region          20..188
                     /region_name="Caleosin"
                     /note="Caleosin related protein; pfam05042"
                     /db_xref="CDD:428275"
     CDS             1..197
                     /gene="LOC107921238"
                     /coded_by="XM_016851118.2:320..913"
                     /db_xref="GeneID:107921238"
ORIGIN      
        1 mafsmppeal legaakpsgs eqsvlekhva ffdrnhdgiv ypwetfegfr aigagyllsm
       61 tgaflihfal ssktrpgkyp spffpievkn ihlakhgsds gvydsdgrfv slkfeeifrk
      121 farthgnalt sgelmamlka nrepqdykgw igswtewmtl ynlckdnngl lrkeivkgvy
      181 dgslfermer drkphrk
//
LOCUS       XP_040942466             288 aa            linear   PLN 06-AUG-2024
DEFINITION  plasmodesmata-located protein 6 [Gossypium hirsutum].
ACCESSION   XP_040942466
VERSION     XP_040942466.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086532.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="plasmodesmata-located protein 6"
                     /calculated_mol_wt=30368
     Region          36..130
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          141..234
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     CDS             1..288
                     /gene="LOC107922619"
                     /coded_by="XM_041086532.1:319..1185"
                     /db_xref="GeneID:107922619"
ORIGIN      
        1 malatkttsl fllllavwcf fitpsnsatd sfvfggcsql kytsgspyes nvnsiltslv
       61 nsamytsysn ftlpgasnqd tvyglfqcrg nlnsgdcgrc vakavsqlgt lcldstggal
      121 qlegcfvkyd nttflgvedk tvvvkkcgps issysdalgr rdavlgylga sdgtykpfrv
      181 sgsgdvqgva qcvgdlspse cqdclseaig rlktdcgaak wgdmylakcy aryseggdhs
      241 hsqkdtnnnd deiektlail igliaavali ilflsflskl cdngkggk
//
LOCUS       XP_040942467             288 aa            linear   PLN 06-AUG-2024
DEFINITION  plasmodesmata-located protein 6 [Gossypium hirsutum].
ACCESSION   XP_040942467
VERSION     XP_040942467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086533.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="plasmodesmata-located protein 6"
                     /calculated_mol_wt=30368
     Region          36..130
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          141..234
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     CDS             1..288
                     /gene="LOC107922619"
                     /coded_by="XM_041086533.1:197..1063"
                     /db_xref="GeneID:107922619"
ORIGIN      
        1 malatkttsl fllllavwcf fitpsnsatd sfvfggcsql kytsgspyes nvnsiltslv
       61 nsamytsysn ftlpgasnqd tvyglfqcrg nlnsgdcgrc vakavsqlgt lcldstggal
      121 qlegcfvkyd nttflgvedk tvvvkkcgps issysdalgr rdavlgylga sdgtykpfrv
      181 sgsgdvqgva qcvgdlspse cqdclseaig rlktdcgaak wgdmylakcy aryseggdhs
      241 hsqkdtnnnd deiektlail igliaavali ilflsflskl cdngkggk
//
LOCUS       XP_040942468             465 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942468
VERSION     XP_040942468.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086534.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..465
                     /product="plant UBX domain-containing protein 2"
                     /calculated_mol_wt=51169
     Region          188..270
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(191,194..195,198,207..208,210..212,215,217,221)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          359..439
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..465
                     /gene="LOC107922091"
                     /coded_by="XM_041086534.1:1911..3308"
                     /db_xref="GeneID:107922091"
ORIGIN      
        1 mdemkgkwsg fmkkvnnqfs ssgnfkgqgr vlgssssgpv npiltrpspp htpspkpipp
       61 ssssssstsk pslpskssns dqntpsnpep pqkpengfdp ygslitsskv skngftlnmf
      121 ecpicgapyv seeevskhve tcieinssdr eggdtdtgln enelqessgi elkvcigsyi
      181 sgnppdgsvq vflrllrniv kepgndkfrk vrmsnpkire aigevsggve llelvgfvlk
      241 eeggemwavv dvlkkemitl mnkaimlleq gkieegnkse keemvepkki drqtrvffsv
      301 pesvaakiel pdsfyslsae evkreaelrk kknaesqlli pksfkekqak agrrryrrtm
      361 iriqfpdgvv lqaafapwep tsslykfvsl slkepslefe lldpvlvkrr vipsfpaagq
      421 kartldeedl vpsalikfkp ietdsvvftg lsnellelse plvtn
//
LOCUS       XP_016707417             465 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707417
VERSION     XP_016707417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..465
                     /product="plant UBX domain-containing protein 2"
                     /calculated_mol_wt=51169
     Region          188..270
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(191,194..195,198,207..208,210..212,215,217,221)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          359..439
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..465
                     /gene="LOC107922091"
                     /coded_by="XM_016851928.2:1731..3128"
                     /db_xref="GeneID:107922091"
ORIGIN      
        1 mdemkgkwsg fmkkvnnqfs ssgnfkgqgr vlgssssgpv npiltrpspp htpspkpipp
       61 ssssssstsk pslpskssns dqntpsnpep pqkpengfdp ygslitsskv skngftlnmf
      121 ecpicgapyv seeevskhve tcieinssdr eggdtdtgln enelqessgi elkvcigsyi
      181 sgnppdgsvq vflrllrniv kepgndkfrk vrmsnpkire aigevsggve llelvgfvlk
      241 eeggemwavv dvlkkemitl mnkaimlleq gkieegnkse keemvepkki drqtrvffsv
      301 pesvaakiel pdsfyslsae evkreaelrk kknaesqlli pksfkekqak agrrryrrtm
      361 iriqfpdgvv lqaafapwep tsslykfvsl slkepslefe lldpvlvkrr vipsfpaagq
      421 kartldeedl vpsalikfkp ietdsvvftg lsnellelse plvtn
//
LOCUS       XP_016707418             465 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707418
VERSION     XP_016707418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..465
                     /product="plant UBX domain-containing protein 2"
                     /calculated_mol_wt=51169
     Region          188..270
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(191,194..195,198,207..208,210..212,215,217,221)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          359..439
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..465
                     /gene="LOC107922091"
                     /coded_by="XM_016851929.2:1726..3123"
                     /db_xref="GeneID:107922091"
ORIGIN      
        1 mdemkgkwsg fmkkvnnqfs ssgnfkgqgr vlgssssgpv npiltrpspp htpspkpipp
       61 ssssssstsk pslpskssns dqntpsnpep pqkpengfdp ygslitsskv skngftlnmf
      121 ecpicgapyv seeevskhve tcieinssdr eggdtdtgln enelqessgi elkvcigsyi
      181 sgnppdgsvq vflrllrniv kepgndkfrk vrmsnpkire aigevsggve llelvgfvlk
      241 eeggemwavv dvlkkemitl mnkaimlleq gkieegnkse keemvepkki drqtrvffsv
      301 pesvaakiel pdsfyslsae evkreaelrk kknaesqlli pksfkekqak agrrryrrtm
      361 iriqfpdgvv lqaafapwep tsslykfvsl slkepslefe lldpvlvkrr vipsfpaagq
      421 kartldeedl vpsalikfkp ietdsvvftg lsnellelse plvtn
//
LOCUS       XP_040942469             465 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942469
VERSION     XP_040942469.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086535.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..465
                     /product="plant UBX domain-containing protein 2"
                     /calculated_mol_wt=51169
     Region          188..270
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(191,194..195,198,207..208,210..212,215,217,221)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          359..439
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..465
                     /gene="LOC107922091"
                     /coded_by="XM_041086535.1:1721..3118"
                     /db_xref="GeneID:107922091"
ORIGIN      
        1 mdemkgkwsg fmkkvnnqfs ssgnfkgqgr vlgssssgpv npiltrpspp htpspkpipp
       61 ssssssstsk pslpskssns dqntpsnpep pqkpengfdp ygslitsskv skngftlnmf
      121 ecpicgapyv seeevskhve tcieinssdr eggdtdtgln enelqessgi elkvcigsyi
      181 sgnppdgsvq vflrllrniv kepgndkfrk vrmsnpkire aigevsggve llelvgfvlk
      241 eeggemwavv dvlkkemitl mnkaimlleq gkieegnkse keemvepkki drqtrvffsv
      301 pesvaakiel pdsfyslsae evkreaelrk kknaesqlli pksfkekqak agrrryrrtm
      361 iriqfpdgvv lqaafapwep tsslykfvsl slkepslefe lldpvlvkrr vipsfpaagq
      421 kartldeedl vpsalikfkp ietdsvvftg lsnellelse plvtn
//
LOCUS       XP_040942470             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942470
VERSION     XP_040942470.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086536.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..130
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14760
     CDS             1..130
                     /gene="LOC121213660"
                     /coded_by="XM_041086536.1:169..561"
                     /db_xref="GeneID:121213660"
ORIGIN      
        1 malewvvlgy tagaeaimll lltvpgldgl rkgliavtrn llkpfmsvvp fclfllmdiy
       61 wkyetrptcd adsctpseyl rhqksimksq rnalliaaal ilywllysvt nlvvkieqln
      121 qrverlknrd
//
LOCUS       XP_016708224             372 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIFY 6B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708224
VERSION     XP_016708224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852735.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="protein TIFY 6B isoform X1"
                     /calculated_mol_wt=39677
     Region          182..213
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     CDS             1..372
                     /gene="LOC107922624"
                     /coded_by="XM_016852735.2:225..1343"
                     /db_xref="GeneID:107922624"
ORIGIN      
        1 merdflglns neplavvkdd vntdkykeig ftkssgiqwp fsnkvfavpq lmnfnfaqgd
       61 ktkktgydsk vsplfmpist mdaaelqksf nhkwnggnhf sltdshvqhn tnmfpasnqt
      121 isvsgsdpfv knhytttgqk fpantikpqf fggvpvttph svlptlgsvg gsvepctkas
      181 gspaqltify agevnvfddi tpekaqaimf lagngssmas nsaypkppvq tpilkpvqvd
      241 svpanqlint qlsfgkpspl pvsshagtqs wsgststeeq iickasvpst pstpiskles
      301 pnlvntmgsd aatgmmpsgi hpyalkgfpf fvlacrkkiv mtksstgsqs flgsvfgeaq
      361 gedneysiti qs
//
LOCUS       XP_016708225             362 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIFY 6B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708225
VERSION     XP_016708225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852736.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..362
                     /product="protein TIFY 6B isoform X2"
                     /calculated_mol_wt=38721
     Region          182..213
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          320..345
                     /region_name="Jas_motif"
                     /note="Jas motif; pfam09425"
                     /db_xref="CDD:430603"
     CDS             1..362
                     /gene="LOC107922624"
                     /coded_by="XM_016852736.2:280..1368"
                     /db_xref="GeneID:107922624"
ORIGIN      
        1 merdflglns neplavvkdd vntdkykeig ftkssgiqwp fsnkvfavpq lmnfnfaqgd
       61 ktkktgydsk vsplfmpist mdaaelqksf nhkwnggnhf sltdshvqhn tnmfpasnqt
      121 isvsgsdpfv knhytttgqk fpantikpqf fggvpvttph svlptlgsvg gsvepctkas
      181 gspaqltify agevnvfddi tpekaqaimf lagngssmas nsaypkppvq tpilkpvqvd
      241 svpanqlint qlsfgkpspl pvsshagtqs wsgststeeq iickasvpst pstpiskles
      301 pnlvntmgsd aatgmmpsvp qarkaslarf lekrkgrims taspynlskk sldyattmes
      361 na
//
LOCUS       XP_016708189             158 aa            linear   PLN 06-AUG-2024
DEFINITION  oleosin G [Gossypium hirsutum].
ACCESSION   XP_016708189
VERSION     XP_016708189.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852700.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708189.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..158
                     /product="oleosin G"
                     /calculated_mol_wt=16902
     Region          <62..143
                     /region_name="Oleosin"
                     /note="pfam01277"
                     /db_xref="CDD:396026"
     CDS             1..158
                     /gene="LOC107922596"
                     /coded_by="XM_016852700.2:1..477"
                     /db_xref="GeneID:107922596"
ORIGIN      
        1 maesdpsqqr parptciapa ftslqkilsh apnttpllaf lfiffvsalt lliltalals
       61 vtvlgfifft plvlftspiw lpgctllflt aagfllacgf ggavaagstw mfryfwgmhp
      121 pgsnrvgsar triydtashv kdyvgylqsk vrdvapga
//
LOCUS       XP_016708190             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708190
VERSION     XP_016708190.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852701.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..111
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13016
     CDS             1..111
                     /gene="LOC107922597"
                     /coded_by="XM_016852701.2:161..496"
                     /db_xref="GeneID:107922597"
ORIGIN      
        1 mfhlklrrtc nihqlhihvc lenyymesfy papaeyfrmr esftlykecy slydysller
       61 spcfpqvrtp gvvfisdmic eatfdrivel lelkisvakn lcigscrkgs k
//
LOCUS       XP_040942471              99 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942471
VERSION     XP_040942471.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086537.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..99
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11515
     CDS             1..99
                     /gene="LOC107922597"
                     /coded_by="XM_041086537.1:61..360"
                     /db_xref="GeneID:107922597"
ORIGIN      
        1 mfhlklrrtc nihqlhihvc lenyymesfy papaeyfrmr esftlykecy slydysller
       61 spcfpqvgal vliipklsfl illavaknlc igscrkgsk
//
LOCUS       XP_040942472              82 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942472
VERSION     XP_040942472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086538.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..82
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9803
     CDS             1..82
                     /gene="LOC107922597"
                     /coded_by="XM_041086538.1:61..309"
                     /db_xref="GeneID:107922597"
ORIGIN      
        1 mfhlklrrtc nihqlhihvc lenyymesfy papaeyfrmr esftlykecy slydysller
       61 spcfpqlpkt calgvaerea nr
//
LOCUS       XP_016707586             316 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKIP28 [Gossypium hirsutum].
ACCESSION   XP_016707586
VERSION     XP_016707586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852097.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="F-box protein SKIP28"
                     /calculated_mol_wt=36106
     Region          25..63
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(25..27,30..31,34,45..47,49,52)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(26,29..30,33..34,38,40..41,45..47,49)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          89..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          115..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..316
                     /gene="LOC107922203"
                     /coded_by="XM_016852097.2:1184..2134"
                     /db_xref="GeneID:107922203"
ORIGIN      
        1 meiaksmela trshkrssfa gpphealflv laylplfell smsevcrslr davekdvlpw
       61 lnviverpls lrlsdeilmk iaskangrlr tlvlmycaki tddglqrvld qnplisklhi
      121 pgctgltpdg viralqklse cqdglkslwi ngianmkkeh lerlqfylqt nqklpqiqqt
      181 rqpllyhnyr rlrayrweel grvidvelcp kcnevrvvfd cpreeckrkr ensmtgcrmc
      241 ifciprceec gecvengdle etvcadtlcl hcwiqlpkcn fcnkpcctqh anmqiastgs
      301 igwicsvchd ksddfe
//
LOCUS       XP_016706729             128 aa            linear   PLN 06-AUG-2024
DEFINITION  dynein light chain LC6, flagellar outer arm [Gossypium hirsutum].
ACCESSION   XP_016706729
VERSION     XP_016706729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851240.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="dynein light chain LC6, flagellar outer arm"
                     /calculated_mol_wt=14465
     Region          1..128
                     /region_name="PLN03058"
                     /note="dynein light chain type 1 family protein;
                     Provisional"
                     /db_xref="CDD:166697"
     CDS             1..128
                     /gene="LOC107921373"
                     /coded_by="XM_016851240.2:872..1258"
                     /db_xref="GeneID:107921373"
ORIGIN      
        1 mdgaeleler rskflnsliq kkkaieqqeq nehlnvkvra sdmplalqnk afkcardqld
       61 ympgkldskr lalalkkefd stygpawhci vgtsfgsyvt hslggflyfs idkvyillfk
      121 tavepldh
//
LOCUS       XP_016706718             191 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016706718
VERSION     XP_016706718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851229.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..191
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=21015
     Region          55..153
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..191
                     /gene="LOC107921361"
                     /coded_by="XM_016851229.2:181..756"
                     /db_xref="GeneID:107921361"
ORIGIN      
        1 maslnpsgye kfsgsppkqg keaattgipl sssnqyfnes cetntrlqtk trvpwssglc
       61 dcfsdwrncc itcwcpcvtf gqiaeivdkg ssscgvngal ytliacvtgc accyscfyrs
      121 kmgqqymlkk hpcgdclvhc cceycalcqe yrelktrgyd lsigwhgnme krsrevamtp
      181 ippvvedgms r
//
LOCUS       XP_016706257             185 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016706257
VERSION     XP_016706257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850768.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..185
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=21181
     Region          49..147
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..185
                     /gene="LOC107920936"
                     /coded_by="XM_016850768.2:614..1171"
                     /db_xref="GeneID:107920936"
ORIGIN      
        1 mypiehpqwp papyhygqpa pppfapvadp nqqmrnqnyy mhpagkvlws tglcdccydi
       61 pnciitcfcp citfgqiaei vdngsvscla sgvlysiifw msglacmysc fyrsrmrnqy
      121 mlaetpypdw clhlccevca lcqeyrelkn rgfnmnigwh anmenmrnra mqmsmppvve
      181 dgmkr
//
LOCUS       XP_016706259             182 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016706259
VERSION     XP_016706259.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706259.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=20179
     Region          46..144
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..182
                     /gene="LOC107920937"
                     /coded_by="XM_016850770.2:184..732"
                     /db_xref="GeneID:107920937"
ORIGIN      
        1 mtkyptnqst sanphhfvqe apvtgvpinp qypqqnytqp prnvpwstgl cdccsdlpnc
       61 cltcwcpcit fgriaeivdh gstscgvsga lyaligiltg cpciyscvyr srmrseymle
      121 drpcndcclh fcceacalcq eyrelknrgf dmslgwhgnm arqqnqglqm psapvmesgm
      181 kr
//
LOCUS       XP_040942473             138 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transport protein 11 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942473
VERSION     XP_040942473.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086539.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="sugar transport protein 11 isoform X1"
                     /calculated_mol_wt=15013
     Region          56..>113
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..138
                     /gene="LOC107922218"
                     /coded_by="XM_041086539.1:1167..1583"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mldvygnhve eglevqfqld gfsipgligs khkvdnlgri dlggllkvta gygkqggslf
       61 gydlgvsggv tsmddflkef fpkiyrrkqa hlhetddckn diqlltlfts slyyleplml
      121 letkgvepas llvqsass
//
LOCUS       XP_016707617             138 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transport protein 11 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707617
VERSION     XP_016707617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="sugar transport protein 11 isoform X1"
                     /calculated_mol_wt=15013
     Region          56..>113
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..138
                     /gene="LOC107922218"
                     /coded_by="XM_016852128.2:615..1031"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mldvygnhve eglevqfqld gfsipgligs khkvdnlgri dlggllkvta gygkqggslf
       61 gydlgvsggv tsmddflkef fpkiyrrkqa hlhetddckn diqlltlfts slyyleplml
      121 letkgvepas llvqsass
//
LOCUS       XP_016707619             138 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transport protein 11 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707619
VERSION     XP_016707619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="sugar transport protein 11 isoform X1"
                     /calculated_mol_wt=15013
     Region          56..>113
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..138
                     /gene="LOC107922218"
                     /coded_by="XM_016852130.2:555..971"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mldvygnhve eglevqfqld gfsipgligs khkvdnlgri dlggllkvta gygkqggslf
       61 gydlgvsggv tsmddflkef fpkiyrrkqa hlhetddckn diqlltlfts slyyleplml
      121 letkgvepas llvqsass
//
LOCUS       XP_016707615             138 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transport protein 11 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707615
VERSION     XP_016707615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852126.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="sugar transport protein 11 isoform X1"
                     /calculated_mol_wt=15013
     Region          56..>113
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..138
                     /gene="LOC107922218"
                     /coded_by="XM_016852126.2:1243..1659"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mldvygnhve eglevqfqld gfsipgligs khkvdnlgri dlggllkvta gygkqggslf
       61 gydlgvsggv tsmddflkef fpkiyrrkqa hlhetddckn diqlltlfts slyyleplml
      121 letkgvepas llvqsass
//
LOCUS       XP_016707610             131 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707610
VERSION     XP_016707610.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852121.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707610.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="NAD-dependent malic enzyme 59 kDa isoform,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=14537
     Region          <1..>92
                     /region_name="PLN03129"
                     /note="NADP-dependent malic enzyme; Provisional"
                     /db_xref="CDD:215594"
     CDS             1..131
                     /gene="LOC107922218"
                     /coded_by="XM_016852121.2:735..1130"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mkwafetlkr yrerfcmfnd dvqgtagval agllgtvraq rrslddfpnh kivvvgagsa
       61 glgvlsmaiq avvrmtgnae iaaqnfflln kdvqfctsfl affilfvqsl lcsfryvmsf
      121 llcnedvdfm n
//
LOCUS       XP_040942474             131 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942474
VERSION     XP_040942474.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086540.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="NAD-dependent malic enzyme 59 kDa isoform,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=14537
     Region          <1..>92
                     /region_name="PLN03129"
                     /note="NADP-dependent malic enzyme; Provisional"
                     /db_xref="CDD:215594"
     CDS             1..131
                     /gene="LOC107922218"
                     /coded_by="XM_041086540.1:1311..1706"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mkwafetlkr yrerfcmfnd dvqgtagval agllgtvraq rrslddfpnh kivvvgagsa
       61 glgvlsmaiq avvrmtgnae iaaqnfflln kdvqfctsfl affilfvqsl lcsfryvmsf
      121 llcnedvdfm n
//
LOCUS       XP_016707613              94 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016707613
VERSION     XP_016707613.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852124.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707613.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..94
                     /product="NAD-dependent malic enzyme 59 kDa isoform,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=10144
     Region          <1..>92
                     /region_name="PLN03129"
                     /note="NADP-dependent malic enzyme; Provisional"
                     /db_xref="CDD:215594"
     CDS             1..94
                     /gene="LOC107922218"
                     /coded_by="XM_016852124.2:734..1018"
                     /db_xref="GeneID:107922218"
ORIGIN      
        1 mkwafetlkr yrerfcmfnd dvqgtagval agllgtvraq rrslddfpnh kivvvgagsa
       61 glgvlsmaiq avvrmtgnae iaaqnfflln kdve
//
LOCUS       XP_016707799             145 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016707799
VERSION     XP_016707799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=15906
     Region          13..111
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..145
                     /gene="LOC107922320"
                     /coded_by="XM_016852310.2:226..663"
                     /db_xref="GeneID:107922320"
ORIGIN      
        1 mqssgqphde apwsvgfcdc fsdmktccia cwcpcitfgq iaeivdkast scgasgalyt
       61 limfitglpc fyscfyrskl rkqyklkggs cgdcmlhfcc etcaltqeyr elqnhgfdms
      121 igwhanvekn qglamapvve kgmsk
//
LOCUS       XP_016706275             270 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706275
VERSION     XP_016706275.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850786.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706275.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..270
                     /product="DNA-directed RNA polymerases I and III subunit
                     RPAC1 isoform X1"
                     /calculated_mol_wt=30311
     Region          1..268
                     /region_name="RNAP_I_II_AC40"
                     /note="AC40 subunit of Eukaryotic RNA polymerase (RNAP) I
                     and RNAP III; cd07032"
                     /db_xref="CDD:132910"
     Site            order(3..9,17,22,149..150,152)
                     /site_type="other"
                     /note="AC40 - RPB12 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     Site            order(14,23,26,69,124..126,129,131,152,157..158,240,242)
                     /site_type="other"
                     /note="AC40 - RPB10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     CDS             1..270
                     /gene="LOC107920955"
                     /coded_by="XM_016850786.2:144..956"
                     /db_xref="GeneID:107920955"
ORIGIN      
        1 maiekvlian ntsiiqdevl ahrlglvpir vdprlfdyls endqpneknt ivfklhvqck
       61 rgspritvks dalkwlpngs elvketrnaa sdssskpety tyfgcsqeti pefvknpiip
      121 kypdiiiakl gpgqeiepea haakgigkth akwspvataw yrmlpevvll edieddlaee
      181 lkskcpvnvf diedlgkgrr ratvarprac tlcrecirgd dwekrvalhr vkdhfiftie
      241 stgalppevl fteavkiled ecervitels
//
LOCUS       XP_016706276             270 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706276
VERSION     XP_016706276.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706276.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..270
                     /product="DNA-directed RNA polymerases I and III subunit
                     RPAC1 isoform X1"
                     /calculated_mol_wt=30311
     Region          1..268
                     /region_name="RNAP_I_II_AC40"
                     /note="AC40 subunit of Eukaryotic RNA polymerase (RNAP) I
                     and RNAP III; cd07032"
                     /db_xref="CDD:132910"
     Site            order(3..9,17,22,149..150,152)
                     /site_type="other"
                     /note="AC40 - RPB12 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     Site            order(14,23,26,69,124..126,129,131,152,157..158,240,242)
                     /site_type="other"
                     /note="AC40 - RPB10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     CDS             1..270
                     /gene="LOC107920955"
                     /coded_by="XM_016850787.2:145..957"
                     /db_xref="GeneID:107920955"
ORIGIN      
        1 maiekvlian ntsiiqdevl ahrlglvpir vdprlfdyls endqpneknt ivfklhvqck
       61 rgspritvks dalkwlpngs elvketrnaa sdssskpety tyfgcsqeti pefvknpiip
      121 kypdiiiakl gpgqeiepea haakgigkth akwspvataw yrmlpevvll edieddlaee
      181 lkskcpvnvf diedlgkgrr ratvarprac tlcrecirgd dwekrvalhr vkdhfiftie
      241 stgalppevl fteavkiled ecervitels
//
LOCUS       XP_016706277             236 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit RPAC1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016706277
VERSION     XP_016706277.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850788.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706277.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..236
                     /product="DNA-directed RNA polymerases I and III subunit
                     RPAC1 isoform X2"
                     /calculated_mol_wt=26541
     Region          <7..234
                     /region_name="RNAP_RPB11_RPB3"
                     /note="RPB11 and RPB3 subunits of RNA polymerase; cl11409"
                     /db_xref="CDD:472176"
     CDS             1..236
                     /gene="LOC107920955"
                     /coded_by="XM_016850788.2:193..903"
                     /db_xref="GeneID:107920955"
ORIGIN      
        1 mkflliendq pnekntivfk lhvqckrgsp ritvksdalk wlpngselvk etrnaasdss
       61 skpetytyfg csqetipefv knpiipkypd iiiaklgpgq eiepeahaak gigkthakws
      121 pvatawyrml pevvlledie ddlaeelksk cpvnvfdied lgkgrrratv arpractlcr
      181 ecirgddwek rvalhrvkdh fiftiestga lppevlftea vkiledecer vitels
//
LOCUS       XP_016706278             236 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit RPAC1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016706278
VERSION     XP_016706278.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706278.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..236
                     /product="DNA-directed RNA polymerases I and III subunit
                     RPAC1 isoform X2"
                     /calculated_mol_wt=26541
     Region          <7..234
                     /region_name="RNAP_RPB11_RPB3"
                     /note="RPB11 and RPB3 subunits of RNA polymerase; cl11409"
                     /db_xref="CDD:472176"
     CDS             1..236
                     /gene="LOC107920955"
                     /coded_by="XM_016850789.2:149..859"
                     /db_xref="GeneID:107920955"
ORIGIN      
        1 mkflliendq pnekntivfk lhvqckrgsp ritvksdalk wlpngselvk etrnaasdss
       61 skpetytyfg csqetipefv knpiipkypd iiiaklgpgq eiepeahaak gigkthakws
      121 pvatawyrml pevvlledie ddlaeelksk cpvnvfdied lgkgrrratv arpractlcr
      181 ecirgddwek rvalhrvkdh fiftiestga lppevlftea vkiledecer vitels
//
LOCUS       XP_016708258             222 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708258
VERSION     XP_016708258.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852769.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24425
     Region          112..222
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..222
                     /gene="LOC107922642"
                     /coded_by="XM_016852769.2:613..1281"
                     /db_xref="GeneID:107922642"
ORIGIN      
        1 mlsflfsslc cmdppsspsa ahsvaptvvs tlansvldsk ffstkkvsil lddcnyllwr
       61 qqvllavkah klqrfldsnt ipppsmitdd dgvlqenvef vkfeqqdsal aswllssvsp
      121 dvlphliglv tssqiwnsiv nlygsrttse lmfyhqalhs qrkgdmsmke fllkiksycd
      181 nlascgeais ahkhitailn glsfeyepiv siilagqhay tv
//
LOCUS       XP_016708259             222 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708259
VERSION     XP_016708259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24425
     Region          112..222
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..222
                     /gene="LOC107922642"
                     /coded_by="XM_016852770.2:810..1478"
                     /db_xref="GeneID:107922642"
ORIGIN      
        1 mlsflfsslc cmdppsspsa ahsvaptvvs tlansvldsk ffstkkvsil lddcnyllwr
       61 qqvllavkah klqrfldsnt ipppsmitdd dgvlqenvef vkfeqqdsal aswllssvsp
      121 dvlphliglv tssqiwnsiv nlygsrttse lmfyhqalhs qrkgdmsmke fllkiksycd
      181 nlascgeais ahkhitailn glsfeyepiv siilagqhay tv
//
LOCUS       XP_016706531             221 aa            linear   PLN 06-AUG-2024
DEFINITION  21 kDa protein [Gossypium hirsutum].
ACCESSION   XP_016706531
VERSION     XP_016706531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="21 kDa protein"
                     /calculated_mol_wt=23974
     Region          51..208
                     /region_name="PMEI-like_3"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; cd15798"
                     /db_xref="CDD:275442"
     Site            order(122..123,126,130,157,169,205)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:275442"
     CDS             1..221
                     /gene="LOC107921167"
                     /coded_by="XM_016851042.2:96..761"
                     /db_xref="GeneID:107921167"
ORIGIN      
        1 mpigmnikhp lsplfltflf fylhpiptlc sanydanttt psnatdfiri scsatlypdl
       61 cfaslsgyan aiqqdparla rtaigvslsr arhmvafvsn lsreadygad prassalhdc
      121 fsnmgdavde irgslnemrr lvnpgsesfr fqmgnvqtwm saaltdeetc tdgfedvgdg
      181 pmktavcera anvkkftsna lalansyaek gthkllnekn v
//
LOCUS       XP_040942477             522 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase [Gossypium hirsutum].
ACCESSION   XP_040942477
VERSION     XP_040942477.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086543.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..522
                     /product="pectinesterase"
                     /calculated_mol_wt=56882
     Region          28..173
                     /region_name="PMEI-like_3"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; cd15798"
                     /db_xref="CDD:275442"
     Site            order(103..104,107,111,125,137,173)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:275442"
     Region          215..508
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..522
                     /gene="LOC107921409"
                     /coded_by="XM_041086543.1:278..1846"
                     /db_xref="GeneID:107921409"
ORIGIN      
        1 mvkllalpfl ityfftcvpl gntaatitsc tqtpypgvcn hfmgngvnva tsslaldqtr
       61 fsfrdlaiqv tlnqavqahr lvstmdltsf neraklawnd clelyqntis hlnrskstns
      121 pldaqtwlsa aianhqtcqn gfidfnlash lqtlppmlan fsklisnsla inkptisvta
      181 kqvgnrrlfa hgfptwlsgs drkllqkiga plnadivvaq dgsgnfktis eavaaaggak
      241 rtvihvkagv ynenvdiqrs arnimligdg igatvvtgnk naqttttfrt atfavvgdgf
      301 iarditfent agpqrhqava lrsgsdfsvf yrcsfkgyqd tlyvysqrqf yrdcdiygtv
      361 dfifgdavaf fqncniyirr pmnsqintit aqartdpnen tgiivhnsrv taasdlravq
      421 gsfknylgrp wqkysrtvfm ktgldgliea egwlpwsgnf glsslyyaeh mntgvgastg
      481 grvkwggyhv idaveaekft vgnflagnaw ipgtgvpfdv gl
//
LOCUS       XP_040942478             522 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase [Gossypium hirsutum].
ACCESSION   XP_040942478
VERSION     XP_040942478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086544.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..522
                     /product="pectinesterase"
                     /calculated_mol_wt=56882
     Region          28..173
                     /region_name="PMEI-like_3"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; cd15798"
                     /db_xref="CDD:275442"
     Site            order(103..104,107,111,125,137,173)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:275442"
     Region          215..508
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..522
                     /gene="LOC107921411"
                     /coded_by="XM_041086544.1:278..1846"
                     /db_xref="GeneID:107921411"
ORIGIN      
        1 mvkllalpfl ityfftcvpl gntaatitsc tqtpypgvcn hfmgngvnva tsslaldqtr
       61 fsfrdlaiqv tlnqavqahr lvstmdltsf neraklawnd clelyqntis hlnrskstns
      121 pldaqtwlsa aianhqtcqn gfidfnlash lqtlppmlan fsklisnsla inkptisvta
      181 kqvgnrrlfa hgfptwlsgs drkllqkiga plnadivvaq dgsgnfktis eavaaaggak
      241 rtvihvkagv ynenvdiqrs arnimligdg igatvvtgnk naqttttfrt atfavvgdgf
      301 iarditfent agpqrhqava lrsgsdfsvf yrcsfkgyqd tlyvysqrqf yrdcdiygtv
      361 dfifgdavaf fqncniyirr pmnsqintit aqartdpnen tgiivhnsrv taasdlravq
      421 gsfknylgrp wqkysrtvfm ktgldgliea egwlpwsgnf glsslyyaeh mntgvgastg
      481 grvkwggyhv idaveaekft vgnflagnaw ipgtgvpfdv gl
//
LOCUS       XP_016707538             582 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglucomutase, cytoplasmic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707538
VERSION     XP_016707538.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852049.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..582
                     /product="phosphoglucomutase, cytoplasmic isoform X1"
                     /calculated_mol_wt=63124
     Region          1..582
                     /region_name="PLN02307"
                     /note="phosphoglucomutase"
                     /db_xref="CDD:177942"
     Site            order(21,123,304,346,367,369,386,388,390,523,525..527,535)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100087"
     Site            order(47..48,53..54,113,139..141,377)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:100087"
     Site            order(123..125,299,301,303..304,369,399,523,525..527,535)
                     /site_type="active"
                     /db_xref="CDD:100087"
     Site            order(123,299,301,303)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:100087"
     CDS             1..582
                     /gene="LOC107922163"
                     /coded_by="XM_016852049.2:223..1971"
                     /db_xref="GeneID:107922163"
ORIGIN      
        1 mvfkvskvst tpidgqkpgt sglrkkvkvf iqphylqnfv qstfnaltpe kvrgatlvvs
       61 gdgryfskda iqiiikmsaa ngvrrvwvgq ngllstpavs avirervgvd gskatgafil
      121 tashnpggph edfgikynme nggpapeait dkifentkti teyliaedlp nidistigva
      181 nfsgpegqfd vevfdsasdy vklmksifdf elirkllsss kftfcydalh gvagayahri
      241 fveelgaqes sllncvpked fggghpdpnl tyakelvarm glgksdsavd ppefgaaadg
      301 dadrnmilgk rffvtpsdsv aiiaanavna ipyfssglkg varsmptsaa ldvvaknlnl
      361 kffevptgwk ffgnlmdagl csicgeesfg tgsdhirekd giwavlawls ilafknkenl
      421 ngdklvtved ivrqhwaiyg rhyytrydye nvdagaakdl maylvklqss ldeinssvkg
      481 arsdvsnvvn adefeykdpv dgsvskhqgi rflfedgsrl vfrlsgtgse gatirlyieq
      541 yekdssktgr dsqealaplv vvalklskml eftgrsaptv it
//
LOCUS       XP_016707539             550 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglucomutase, cytoplasmic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707539
VERSION     XP_016707539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..550
                     /product="phosphoglucomutase, cytoplasmic isoform X2"
                     /calculated_mol_wt=59858
     Region          1..550
                     /region_name="PLN02307"
                     /note="phosphoglucomutase"
                     /db_xref="CDD:177942"
     Site            order(21,123,304,314,335,337,354,356,358,491,493..495,503)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100087"
     Site            order(47..48,53..54,113,139..141,345)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:100087"
     Site            order(123..125,299,301,303..304,337,367,491,493..495,503)
                     /site_type="active"
                     /db_xref="CDD:100087"
     Site            order(123,299,301,303)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:100087"
     CDS             1..550
                     /gene="LOC107922163"
                     /coded_by="XM_016852050.2:223..1875"
                     /db_xref="GeneID:107922163"
ORIGIN      
        1 mvfkvskvst tpidgqkpgt sglrkkvkvf iqphylqnfv qstfnaltpe kvrgatlvvs
       61 gdgryfskda iqiiikmsaa ngvrrvwvgq ngllstpavs avirervgvd gskatgafil
      121 tashnpggph edfgikynme nggpapeait dkifentkti teyliaedlp nidistigva
      181 nfsgpegqfd vevfdsasdy vklmksifdf elirkllsss kftfcydalh gvagayahri
      241 fveelgaqes sllncvpked fggghpdpnl tyakelvarm glgksdsavd ppefgaaadg
      301 dadrnmilgk rsmptsaald vvaknlnlkf fevptgwkff gnlmdaglcs icgeesfgtg
      361 sdhirekdgi wavlawlsil afknkenlng dklvtvediv rqhwaiygrh yytrydyenv
      421 dagaakdlma ylvklqssld einssvkgar sdvsnvvnad efeykdpvdg svskhqgirf
      481 lfedgsrlvf rlsgtgsega tirlyieqye kdssktgrds qealaplvvv alklskmlef
      541 tgrsaptvit
//
LOCUS       XP_016707286             400 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707286
VERSION     XP_016707286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851797.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="putative receptor-like protein kinase At4g00960
                     isoform X1"
                     /calculated_mol_wt=44788
     Region          58..324
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(58..62,66,78,80,109,125..128,132,134,177,179,
                     181..182,184,195,198,215..218)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(58..62,66,78,80,109,125..128,132,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(62,132,134,177,179,181,198,215..218)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(194..201,211..218)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..400
                     /gene="LOC107921991"
                     /coded_by="XM_016851797.2:607..1809"
                     /db_xref="GeneID:107921991"
ORIGIN      
        1 mtkskdffln likpfkfiss kdrrsrddle kiaqqeqkhf pfeilvaatk dfhphqklge
       61 ggfgpvyrgk lddgrevavk klshssrqgk kefenearll arvqhrnvvn llgycvhgae
      121 kllvyeyvtn esldkllfks nrkteldwkr ryeiisgvar gllylhedsh nriihrdika
      181 gnillddkwv pkiadfgmar lfpedqthvn trvagtngym apeyvmngrl svkadvfsfg
      241 vvvlelisgq rnssfnldvd ahsllewayk lykkgkslef mdpvlassav peqvamciqi
      301 gllctqgdpq lrpdmrrvvi llskrpgsle eptrpgalga rhrrshrppg fsstagtsgv
      361 sdshssessf ntytasasas tsalasplks drhgkrpiqs
//
LOCUS       XP_016707287             400 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707287
VERSION     XP_016707287.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851798.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="putative receptor-like protein kinase At4g00960
                     isoform X1"
                     /calculated_mol_wt=44788
     Region          58..324
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(58..62,66,78,80,109,125..128,132,134,177,179,
                     181..182,184,195,198,215..218)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(58..62,66,78,80,109,125..128,132,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(62,132,134,177,179,181,198,215..218)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(194..201,211..218)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..400
                     /gene="LOC107921991"
                     /coded_by="XM_016851798.2:314..1516"
                     /db_xref="GeneID:107921991"
ORIGIN      
        1 mtkskdffln likpfkfiss kdrrsrddle kiaqqeqkhf pfeilvaatk dfhphqklge
       61 ggfgpvyrgk lddgrevavk klshssrqgk kefenearll arvqhrnvvn llgycvhgae
      121 kllvyeyvtn esldkllfks nrkteldwkr ryeiisgvar gllylhedsh nriihrdika
      181 gnillddkwv pkiadfgmar lfpedqthvn trvagtngym apeyvmngrl svkadvfsfg
      241 vvvlelisgq rnssfnldvd ahsllewayk lykkgkslef mdpvlassav peqvamciqi
      301 gllctqgdpq lrpdmrrvvi llskrpgsle eptrpgalga rhrrshrppg fsstagtsgv
      361 sdshssessf ntytasasas tsalasplks drhgkrpiqs
//
LOCUS       XP_016707288             383 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707288
VERSION     XP_016707288.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851799.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..383
                     /product="putative receptor-like protein kinase At4g00960
                     isoform X2"
                     /calculated_mol_wt=42773
     Region          41..307
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(41..45,49,61,63,92,108..111,115,117,160,162,
                     164..165,167,178,181,198..201)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(41..45,49,61,63,92,108..111,115,160,162,164..165,
                     167,178)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(45,115,117,160,162,164,181,198..201)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(177..184,194..201)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..383
                     /gene="LOC107921991"
                     /coded_by="XM_016851799.2:287..1438"
                     /db_xref="GeneID:107921991"
ORIGIN      
        1 mliedrrsrd dlekiaqqeq khfpfeilva atkdfhphqk lgeggfgpvy rgklddgrev
       61 avkklshssr qgkkefenea rllarvqhrn vvnllgycvh gaekllvyey vtnesldkll
      121 fksnrkteld wkrryeiisg vargllylhe dshnriihrd ikagnilldd kwvpkiadfg
      181 marlfpedqt hvntrvagtn gymapeyvmn grlsvkadvf sfgvvvleli sgqrnssfnl
      241 dvdahsllew ayklykkgks lefmdpvlas savpeqvamc iqigllctqg dpqlrpdmrr
      301 vvillskrpg sleeptrpga lgarhrrshr ppgfsstagt sgvsdshsse ssfntytasa
      361 sastsalasp lksdrhgkrp iqs
//
LOCUS       XP_040942479             944 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942479
VERSION     XP_040942479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086545.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..944
                     /product="myosin-binding protein 2"
                     /calculated_mol_wt=106583
     Region          <574..>781
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          575..653
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..944
                     /gene="LOC121213665"
                     /coded_by="XM_041086545.1:538..3372"
                     /db_xref="GeneID:121213665"
ORIGIN      
        1 maankfatml hkntnritli lvyvllewil ivllllnslf syliikfady fglkrpclwc
       61 srldhifeps kyksyrdlvc ddhaneiskl gfcsnhrkls esrdmcedcl ssspsengdd
      121 evmengdedf kcsccgvmve kkwnlpcfmi kpswevldyp qegnlitegg ekvegiiade
      181 gnasdgirsd fvagdhkdeq mieenkrvgi isddegiepr evekeefsyf vssfdcnqva
      241 angdeddvvi ekdqssvdeg dltvsmadqg ltqvtcakee speilnkhle fyiggddchl
      301 ipvelmdsta mrsqkiyeft eededvagtg dvildfdlqq pgtrvelvve ngcssaekvt
      361 plsphvseee tidavdepme pngkegfstp aveldlmeke ddqhvattqa nmpslneadd
      421 vqpnattree eidldvnqai sigtdvvqfn etiediqiqh lyectqgdps tsselhadad
      481 rgskdveeet mqqlktatfe setsdqpmkn hlslsselnd ieedkvpdtp tsidslhllh
      541 kklllldrke sgtedsldgs vfsdieggdg vltvdklksa lkaerkalna lyseleeers
      601 asavaanqtm aminrlqeek aamqmeavqy qrmmeeqsey dqealqilne lmvkrekeka
      661 elekeleiyr kkvqdheake rmmmlrrrkd dsirsassas csnaedsdgv svdlnheske
      721 edsfenhqir edvnqntpad avlyleesla nfeeerlsil eqlkvleeql islndeeeqq
      781 hfediksvey lyeengngfh eihnfghetn gvanghfkgv ngkhhqdkii pvatkakrll
      841 plfdatdaet eekilnghen gfnsvalqht lpelenkmit ieeevdhvye rlqaleadre
      901 flkhcisslr kgdkgiyllq eilqhlrdlr svelrvrsng dvai
//
LOCUS       XP_040942480             944 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942480
VERSION     XP_040942480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086546.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..944
                     /product="myosin-binding protein 2"
                     /calculated_mol_wt=106583
     Region          <574..>781
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          575..653
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..944
                     /gene="LOC121213665"
                     /coded_by="XM_041086546.1:526..3360"
                     /db_xref="GeneID:121213665"
ORIGIN      
        1 maankfatml hkntnritli lvyvllewil ivllllnslf syliikfady fglkrpclwc
       61 srldhifeps kyksyrdlvc ddhaneiskl gfcsnhrkls esrdmcedcl ssspsengdd
      121 evmengdedf kcsccgvmve kkwnlpcfmi kpswevldyp qegnlitegg ekvegiiade
      181 gnasdgirsd fvagdhkdeq mieenkrvgi isddegiepr evekeefsyf vssfdcnqva
      241 angdeddvvi ekdqssvdeg dltvsmadqg ltqvtcakee speilnkhle fyiggddchl
      301 ipvelmdsta mrsqkiyeft eededvagtg dvildfdlqq pgtrvelvve ngcssaekvt
      361 plsphvseee tidavdepme pngkegfstp aveldlmeke ddqhvattqa nmpslneadd
      421 vqpnattree eidldvnqai sigtdvvqfn etiediqiqh lyectqgdps tsselhadad
      481 rgskdveeet mqqlktatfe setsdqpmkn hlslsselnd ieedkvpdtp tsidslhllh
      541 kklllldrke sgtedsldgs vfsdieggdg vltvdklksa lkaerkalna lyseleeers
      601 asavaanqtm aminrlqeek aamqmeavqy qrmmeeqsey dqealqilne lmvkrekeka
      661 elekeleiyr kkvqdheake rmmmlrrrkd dsirsassas csnaedsdgv svdlnheske
      721 edsfenhqir edvnqntpad avlyleesla nfeeerlsil eqlkvleeql islndeeeqq
      781 hfediksvey lyeengngfh eihnfghetn gvanghfkgv ngkhhqdkii pvatkakrll
      841 plfdatdaet eekilnghen gfnsvalqht lpelenkmit ieeevdhvye rlqaleadre
      901 flkhcisslr kgdkgiyllq eilqhlrdlr svelrvrsng dvai
//
LOCUS       XP_040942481             847 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942481
VERSION     XP_040942481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086547.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..847
                     /product="uncharacterized protein"
                     /calculated_mol_wt=92687
     Region          <111..273
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          175..209
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(200,204,208,241,245,249,285,289)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          217..252
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          258..291
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          655..>842
                     /region_name="INSC_LBD"
                     /note="LGN-binding domain (LBD) of protein Inscuteable
                     (INSC) and similar proteins; cl41917"
                     /db_xref="CDD:477865"
     Region          736..763
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <745..>824
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Site            order(753,757,762,796,800,804,840,844)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          771..807
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          812..845
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..847
                     /gene="LOC107948905"
                     /coded_by="XM_041086547.1:125..2668"
                     /db_xref="GeneID:107948905"
ORIGIN      
        1 miasatlspy fnikllnprh vftttkprrk ystfstkfhl nhlwngflqp kscslrtvlr
       61 kvsddggsid anpqesaavs vgegtsssss tlgdnyvalf vrmlgldhda ldreqaival
      121 wkyslggknc idtimqfqgc inltvnllns essatceaaa gllrsissin lykdivaesg
      181 aiegitglls rpsltsevke qsmctlwnls vdeelrvkia nsdilpflin slddddikvk
      241 eaaggvlsnl alshcnhsmm veagiipkla kllktdmegs kvirkearna llelikdqfy
      301 rilvieeglv pvpmvgaasy ksfkpglysw ptmpdgteie qtskgpskfg aselllglnv
      361 genaeleear knaivgrtqq qflarigaie ldgkresqsd iptdnrftll pwidgvarlv
      421 lilelndeva israaesiad ssinehmrts fkeagaikhl vrlldhnsfa vrsavihale
      481 rlsvssslyh vleaegilhp lvctlkrset sgslmektld ilarildpsk emkskfyngp
      541 vngskmgida arsldasarl tgdkpvsimd srkelldstv itrlieilkt spsnlqrkva
      601 silefitiie psmetiikvd vssgleavfq qkavkdkead vegqeldeya leleeaglav
      661 saasrlltkl ldseqfcqki dsthftkllr kilksdiplr nkdwvaaclv klcsisspnv
      721 dfenpinmev tlyetiprli eqiklslspe tqesaaveln riisegvvds travasevgi
      781 fplvnlieqg sdraveaals ilynlsmdse nhsaiiaaga vpalrkivls qrshwsralr
      841 llrnlpv
//
LOCUS       XP_040942482             171 aa            linear   PLN 06-AUG-2024
DEFINITION  probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040942482
VERSION     XP_040942482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086548.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="probable NAD(P)H dehydrogenase subunit CRR3,
                     chloroplastic"
                     /calculated_mol_wt=18709
     CDS             1..171
                     /gene="LOC121202995"
                     /coded_by="XM_041086548.1:70..585"
                     /db_xref="GeneID:121202995"
ORIGIN      
        1 maclscscis iamakavihp piasltdkps pqetqtnskp ktatrprkkr qrlrqqkphp
       61 ppsivqiera igagsfrdad ssdleeqrrk tifdgllpvt ggkfegdiek klcetgewig
      121 ttteatfrss gktillvvlq wilpiwtfsl lvasgviklp fstpliddli m
//
LOCUS       XP_040942483             580 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942483
VERSION     XP_040942483.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086549.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..580
                     /product="uncharacterized protein"
                     /calculated_mol_wt=64161
     Region          <194..>555
                     /region_name="TMEM214"
                     /note="C-terminal, caspase 4 activator; pfam10151"
                     /db_xref="CDD:462966"
     CDS             1..580
                     /gene="LOC121213667"
                     /coded_by="XM_041086549.1:350..2092"
                     /db_xref="GeneID:121213667"
ORIGIN      
        1 mesvdlhett nanhvdhgwq kvsypkrqrk tkpnadpnlp rpngtltngs asvfhsleqq
       61 sddrrrrive aqrayaaaai dadakhkpkr sviddsdddd gsdldglkpn gkpadeekka
      121 kqkkpkkpkv tvveaaakid ptdlsayfae wngeqqeiqm qkfadyygkv fqlvvagqfp
      181 wlklfrestv akladiplsh isdavyktsa dwisqrslea lgffvlwsld iiledlaaqq
      241 agakgskkga qqtslkskvg ifvalgmvlq rkpdalisvl pklrenskyq gqdklpifaw
      301 tivqaskgdl avglyswahl llpvlssknc npqsrdlilq lvewilsvsk arsilvnnav
      361 rkgerlvpps sfeilmratf passsrvkat erfeaiyptv kevalagahg skamrqvalq
      421 mfafaikaag esspelskea agiviwclnq naecykqwdk vyldnleasv svlrrlsdew
      481 kehstklttl dplretiknf rnknekemgn esdaatqalf qdadkyckli agrlsrgpgc
      541 lkalaflvva fgvgaavvap nmddwdwnkl yvvissqipv
//
LOCUS       XP_016733838             616 aa            linear   PLN 06-AUG-2024
DEFINITION  DELLA protein GAIP-B [Gossypium hirsutum].
ACCESSION   XP_016733838
VERSION     XP_016733838.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878349.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..616
                     /product="DELLA protein GAIP-B"
                     /calculated_mol_wt=67661
     Region          41..107
                     /region_name="DELLA"
                     /note="Transcriptional regulator DELLA protein N terminal;
                     pfam12041"
                     /db_xref="CDD:403308"
     Region          247..606
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..616
                     /gene="LOC107944529"
                     /coded_by="XM_016878349.2:522..2372"
                     /db_xref="GeneID:107944529"
ORIGIN      
        1 mkrdhnhlqp npdpsslrda pstgkakvwd eeaaqqdcgm dellavlgyk vktsdmaeva
       61 qkleqleevm cnvqddgish lasetvhynp sdlstwlesm lselnppstf dpfgaagtaa
      121 aalddsflgp aesstlttld fdninrkhqk sgqqifeeas csdydlkaip gkaiysqntq
      181 pqpqthdsss sstptnvkse krfkstsgpp spsdifpppp aaasygiptd strpvvlvds
      241 qengirlvha lmacaeavqq nnlnlaealv kqigflaisq agamrkvaty faealarriy
      301 rfypqnpldh sfsdvlhmhf yetcpylkfa hftanqaile afegkkrvhv idfsmnqgmq
      361 wpalmqalal rvggppafrl tgigppshdn sdhlqevgwk laqfaekihv efeyrgfvan
      421 sladldasml dlrpseveav avnsvfelhk llarpaaidk vfsvvkqmkp elvtiveqea
      481 nhngpvfldr fteslhyyst lfdslegsvs sqdkvmsevy lgkqicnvva cegvdrierh
      541 esltqwrnrl stagfspvhl gsnafkqasm llalfaggdg ygveenngcl mlgwhnrpli
      601 ttsawkltnk ttaisq
//
LOCUS       XP_040942484             137 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g22758 [Gossypium hirsutum].
ACCESSION   XP_040942484
VERSION     XP_040942484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086550.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..137
                     /product="uncharacterized protein At4g22758"
                     /calculated_mol_wt=14908
     CDS             1..137
                     /gene="LOC121213668"
                     /coded_by="XM_041086550.1:750..1163"
                     /db_xref="GeneID:121213668"
ORIGIN      
        1 mllykqkksq gpkgnrllis vtvlgsagpi rfvvneeelv aavidtalks yaregrlpvl
       61 gsnlndflly cpsagsdals pwetigsqga rnfmlckkqr tekvkddgka aesinrkasg
      121 nwkawfnksl nlkissh
//
LOCUS       XP_040942485             618 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphomannomutase/phosphoglucomutase [Gossypium hirsutum].
ACCESSION   XP_040942485
VERSION     XP_040942485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086551.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..618
                     /product="phosphomannomutase/phosphoglucomutase"
                     /calculated_mol_wt=67567
     Region          1..604
                     /region_name="PLN02371"
                     /note="phosphoglucosamine mutase family protein"
                     /db_xref="CDD:215211"
     Site            order(73,75,78,184..186,194,337,339,341..342,380,401..403,
                     425,427,429,562,564..566)
                     /site_type="active"
                     /db_xref="CDD:100091"
     Site            order(75,78,184,342,380,401,403,425,427,429,562,564..566)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100091"
     Site            order(184,337,339,341)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:100091"
     CDS             1..618
                     /gene="LOC107916887"
                     /coded_by="XM_041086551.1:215..2071"
                     /db_xref="GeneID:107916887"
ORIGIN      
        1 maststslip lrghgrkasf ssspaktalk kalrfsfssr ssvvicvkss sgavkynevv
       61 vdeemdkirr lqngsdvrgv alegekgrtv dltppaveai aesfgewiik alqkergrpv
      121 edvtvslgkd prisgaslsv avfaglarag cltfdlglat tpacfmstll ppfaydasim
      181 mtashlpytr nglkfftkkg gltspeveei cdkaahkyan rltkvstmln sppkkvdfmr
      241 ayakhlrdii kervnhpihy dtplkgfqii vnagngsggf ftwdvldqlg adtfgslhln
      301 pdgmfpnhip npedktamal traavlenta dlgivfdtdv drsgvvdnng npingdklia
      361 lmsavvlkeh pgttivtdar tsmeltrfit drgghhclyr vgyrnvidkg vhlnqdgvet
      421 hlmmetsghg alkenyfldd gaymvvkiii emvrmrlegs degigslikd leeplesiel
      481 rmniisepky akargrevie afrsyieegq lkgwaldacg dcwvsegclv dsndspaaid
      541 ahmyrakvsn ekneeigwvh irqsihnpni ainmqssvpg gcqlmtkvfr dkflmvsgmg
      601 ktldfsqvdk yarlgkmg
//
LOCUS       XP_040942486              84 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH110-like [Gossypium hirsutum].
ACCESSION   XP_040942486
VERSION     XP_040942486.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086552.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..84
                     /product="transcription factor bHLH110-like"
                     /calculated_mol_wt=9510
     Region          15..>53
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     CDS             1..84
                     /gene="LOC121213670"
                     /coded_by="XM_041086552.1:421..675"
                     /db_xref="GeneID:121213670"
ORIGIN      
        1 mrfnvkqayw lsdrirerim qmvrkeklgd kitalhqlvs pfgkknggvl lqeddiavsn
       61 vridltregk ilskastfsr gctf
//
LOCUS       XP_016703243             157 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 43 [Gossypium hirsutum].
ACCESSION   XP_016703243
VERSION     XP_016703243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="MLP-like protein 43"
                     /calculated_mol_wt=17802
     Region          6..156
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(10,14,27..28,31,35,42,61,63..64,69,72,74,86,88,90,
                     94,102,104,106,108,119,121,123,125,137..138,140..141,
                     144..145,147..149)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(50..51,53..59)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..157
                     /gene="LOC107918213"
                     /coded_by="XM_016847754.2:197..670"
                     /db_xref="GeneID:107918213"
ORIGIN      
        1 massdligkl etdveidisp ekfhhmwchr phhvhhtsse kvqgcdlheg efgtpgvvic
       61 wryvhdgkak takqvvevmd hekksitfkm legdlmeeyk sfvitiqtsp ksdgkgsivh
      121 wtldyeklhe gighpesllq ffieltadma ahlrket
//
LOCUS       XP_040942487             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942487
VERSION     XP_040942487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086553.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=41257
     Region          55..>257
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          248..>322
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..369
                     /gene="LOC107956740"
                     /coded_by="XM_041086553.1:180..1289"
                     /db_xref="GeneID:107956740"
ORIGIN      
        1 mqrahnqmgv wftvitlqpe satglllslp viaitppqrr lgippsfhlf ysifcphqas
       61 gspkfpfqrr iasfsrhssn gfngvnkpss kalikgpfls dgliqrrnlh lqvicrvgvy
      121 tlgendvves hhshameeki gvlllnlggp ktlkdvqpfl ynlfvdldii rlprlfkllq
      181 rplaklisvl rapkseegya aigggsplrk itdeqenalr maleaknvnv svyvgmrywy
      241 pfteevieqv dtlldgikwd dkglavaiaq nvdtgailmq gfvnrgalat titsrkatff
      301 srpratlwtk getsnnfini ydkrrnklcv qfswrgfllg hvrlllvkll eiqeqigssn
      361 ikmsnlvli
//
LOCUS       XP_040942489             350 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-1, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942489
VERSION     XP_040942489.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086555.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="ferrochelatase-1, chloroplastic isoform X2"
                     /calculated_mol_wt=39229
     Region          37..>238
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          229..>303
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..350
                     /gene="LOC107956740"
                     /coded_by="XM_041086555.1:781..1833"
                     /db_xref="GeneID:107956740"
ORIGIN      
        1 menlsqihli pkfqllflik imeatslsgv fsytklcgss lcysddrfsr riasfsrhss
       61 ngfngvnkps skalikgpfl sdgliqrrnl hlqvicrvgv ytlgendvve shhshameek
      121 igvlllnlgg pktlkdvqpf lynlfvdldi irlprlfkll qrplaklisv lrapkseegy
      181 aaigggsplr kitdeqenal rmaleaknvn vsvyvgmryw ypfteevieq vdtlldgikw
      241 ddkglavaia qnvdtgailm qgfvnrgala ttitsrkatf fsrpratlwt kgetsnnfin
      301 iydkrrnklc vqfswrgfll ghvrlllvkl leiqeqigss nikmsnlvli
//
LOCUS       XP_040942490             322 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942490
VERSION     XP_040942490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086556.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..322
                     /product="ferrochelatase isoform X3"
                     /calculated_mol_wt=36054
     Region          55..>210
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          201..>275
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..322
                     /gene="LOC107956740"
                     /coded_by="XM_041086556.1:178..1146"
                     /db_xref="GeneID:107956740"
ORIGIN      
        1 mqrahnqmgv wftvitlqpe satglllslp viaitppqrr lgippsfhlf ysifcphqas
       61 gspkfpfqrv gvytlgendv veshhshame ekigvlllnl ggpktlkdvq pflynlfvdl
      121 diirlprlfk llqrplakli svlrapksee gyaaigggsp lrkitdeqen alrmaleakn
      181 vnvsvyvgmr ywypfteevi eqvdtlldgi kwddkglava iaqnvdtgai lmqgfvnrga
      241 lattitsrka tffsrpratl wtkgetsnnf iniydkrrnk lcvqfswrgf llghvrlllv
      301 klleiqeqig ssnikmsnlv li
//
LOCUS       XP_016706236             287 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 6 [Gossypium hirsutum].
ACCESSION   XP_016706236
VERSION     XP_016706236.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850747.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706236.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..287
                     /product="chaperone protein dnaJ 6"
                     /calculated_mol_wt=32939
     Region          34..96
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(62..64,73,76..77,80..81)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..287
                     /gene="LOC107920917"
                     /coded_by="XM_016850747.2:163..1026"
                     /db_xref="GeneID:107920917"
ORIGIN      
        1 mgkrkksrvs rdedeedevv qeeegnhsss nekslyeilg vekaasqqei kkayyklalr
       61 lhpdknpgde eakekfqqlq kvisilsdee kravydqtgc vddtdlagdv venlksffrt
      121 mykkvtdadi eefeanyrgs dsekkdlidl yrkfkgnmnk lfcsmlcsdp kldshrfkdm
      181 ldeaiaagel keskaykkwa kkvaemkppt splrrkgksn kqpesdlfai isqrrnerkd
      241 rfdsmfsslv skyggnaese pteeefeaak rkveskkasn nskrkrq
//
LOCUS       XP_016706614             305 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-121 [Gossypium hirsutum].
ACCESSION   XP_016706614
VERSION     XP_016706614.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706614.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..305
                     /product="syntaxin-121"
                     /calculated_mol_wt=34498
     Region          43..246
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          214..280
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(242,249,252)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            245
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..305
                     /gene="LOC107921249"
                     /coded_by="XM_016851125.2:247..1164"
                     /db_xref="GeneID:107921249"
ORIGIN      
        1 mndlfsgsfs rppssefspd hhviqmtpqp sspagdgvdh lhkffkdves ingelkelek
       61 lngdlssshe qsktlhnaka vkelrakmds dvnmalqkak likarleald rssdtsrnmp
      121 gcgpgsssdr trtsvvnglr kklkdsmesf nglrekisse yretverryf tvtgenpdvr
      181 tldllistge setfmqkaiq eqgrgrvldt ineiqerhda vkdleknlke lhqvfmdmav
      241 lvqtqgeeld dierqvnran syvrdgatrl qtarnyqknt rkwtcyaiil lliiliivlv
      301 ilrpw
//
LOCUS       XP_016706635             135 aa            linear   PLN 06-AUG-2024
DEFINITION  dihydroneopterin aldolase 2 [Gossypium hirsutum].
ACCESSION   XP_016706635
VERSION     XP_016706635.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851146.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..135
                     /product="dihydroneopterin aldolase 2"
                     /calculated_mol_wt=14803
     Region          14..125
                     /region_name="FolB"
                     /note="Dihydroneopterin aldolase; pfam02152"
                     /db_xref="CDD:460466"
     CDS             1..135
                     /gene="LOC107921273"
                     /coded_by="XM_016851146.2:52..459"
                     /db_xref="GeneID:107921273"
ORIGIN      
        1 megigngipt gdklilrglk fhgfhgvkae ekklgqkflv dvdawmdlrk agksdnlsdt
       61 lsytdiyriv kevvegpshd llesvaqmia sktftnhsqi savrvkvgkp hvavhgcldy
      121 lgveimryrt idapn
//
LOCUS       XP_016706524             562 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706524
VERSION     XP_016706524.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851035.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706524.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=63626
     Region          66..288
                     /region_name="START_2"
                     /note="Uncharacterized subgroup of the steroidogenic acute
                     regulatory protein (StAR)-related lipid transfer (START)
                     domain family; cd08877"
                     /db_xref="CDD:176886"
     Site            order(91..92,99,113,115,126,130,136,139..140,149..150,169,
                     171..174,176,179,181,183,200,229,231..234,236,248,250,252,
                     254,256,258,266,268..270,272..274,277..278,281)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176886"
     CDS             1..562
                     /gene="LOC107921163"
                     /coded_by="XM_016851035.2:403..2091"
                     /db_xref="GeneID:107921163"
ORIGIN      
        1 mekekaisry rerldktlsc aeltdpemlk tlvknqilry aqdekedfse dllgkrarev
       61 snllgmlrst ciddhhvsks setshgewkl khdneefrvm yregphgtpf htllvegyvd
      121 gpldvclcis wesalykkww pqssfppfki nsstclqkvr igeqislvrm kvawplsare
      181 alvhffffey fqedlivilv ntisdvssid kathgftnng ipeakdvvri dmvggfalqk
      241 vndersyfrt ianmdmkldf vppslinfis rqlvgngfrl yqktvasvsn hdkdyskalg
      301 dplfalirea lyasnksgev levhgpksea lllrnkslie rtqddthdig kklcandhav
      361 eippwkeqdt viksfgeiee eetegstqpe egdnitfdan gvndkrkfsi rpevqdalrt
      421 ldkvislvqq hgfnsrtsfs deetanleeg avylkaednv katseqfaen lemtldksqn
      481 ssdindtrde dsnsfarean hnkevpvspl pnvskpnnqv alsfyrngtv evngfhengl
      541 sevkklsnrr khrlgcfgfn sg
//
LOCUS       XP_016706525             562 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706525
VERSION     XP_016706525.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706525.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=63626
     Region          66..288
                     /region_name="START_2"
                     /note="Uncharacterized subgroup of the steroidogenic acute
                     regulatory protein (StAR)-related lipid transfer (START)
                     domain family; cd08877"
                     /db_xref="CDD:176886"
     Site            order(91..92,99,113,115,126,130,136,139..140,149..150,169,
                     171..174,176,179,181,183,200,229,231..234,236,248,250,252,
                     254,256,258,266,268..270,272..274,277..278,281)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176886"
     CDS             1..562
                     /gene="LOC107921163"
                     /coded_by="XM_016851036.2:398..2086"
                     /db_xref="GeneID:107921163"
ORIGIN      
        1 mekekaisry rerldktlsc aeltdpemlk tlvknqilry aqdekedfse dllgkrarev
       61 snllgmlrst ciddhhvsks setshgewkl khdneefrvm yregphgtpf htllvegyvd
      121 gpldvclcis wesalykkww pqssfppfki nsstclqkvr igeqislvrm kvawplsare
      181 alvhffffey fqedlivilv ntisdvssid kathgftnng ipeakdvvri dmvggfalqk
      241 vndersyfrt ianmdmkldf vppslinfis rqlvgngfrl yqktvasvsn hdkdyskalg
      301 dplfalirea lyasnksgev levhgpksea lllrnkslie rtqddthdig kklcandhav
      361 eippwkeqdt viksfgeiee eetegstqpe egdnitfdan gvndkrkfsi rpevqdalrt
      421 ldkvislvqq hgfnsrtsfs deetanleeg avylkaednv katseqfaen lemtldksqn
      481 ssdindtrde dsnsfarean hnkevpvspl pnvskpnnqv alsfyrngtv evngfhengl
      541 sevkklsnrr khrlgcfgfn sg
//
LOCUS       XP_016706526             486 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706526
VERSION     XP_016706526.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851037.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706526.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..486
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=54852
     Region          14..212
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(37,39,41,50..52,54..55,77,89,91,93,95,107,109,111,
                     122,124,157..158,160,162,172,174,176,178,190..194,
                     196..197,200..202,205)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..486
                     /gene="LOC107921163"
                     /coded_by="XM_016851037.2:222..1682"
                     /db_xref="GeneID:107921163"
ORIGIN      
        1 miitfqnpvk hhmlkhdnee frvmyregph gtpfhtllve gyvdgpldvc lciswesaly
       61 kkwwpqssfp pfkinsstcl qkvrigeqis lvrmkvawpl sarealvhff ffeyfqedli
      121 vilvntisdv ssidkathgf tnngipeakd vvridmvggf alqkvnders yfrtianmdm
      181 kldfvppsli nfisrqlvgn gfrlyqktva svsnhdkdys kalgdplfal irealyasnk
      241 sgevlevhgp ksealllrnk sliertqddt hdigkklcan dhaveippwk eqdtviksfg
      301 eieeeetegs tqpeegdnit fdangvndkr kfsirpevqd alrtldkvis lvqqhgfnsr
      361 tsfsdeetan leegavylka ednvkatseq faenlemtld ksqnssdind trdedsnsfa
      421 reanhnkevp vsplpnvskp nnqvalsfyr ngtvevngfh englsevkkl snrrkhrlgc
      481 fgfnsg
//
LOCUS       XP_016706527             463 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706527
VERSION     XP_016706527.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706527.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..463
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=52005
     Region          1..189
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(14,16,18,27..29,31..32,54,66,68,70,72,84,86,88,99,
                     101,134..135,137,139,149,151,153,155,167..171,173..174,
                     177..179,182)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..463
                     /gene="LOC107921163"
                     /coded_by="XM_016851038.2:370..1761"
                     /db_xref="GeneID:107921163"
ORIGIN      
        1 myregphgtp fhtllvegyv dgpldvclci swesalykkw wpqssfppfk insstclqkv
       61 rigeqislvr mkvawplsar ealvhffffe yfqedlivil vntisdvssi dkathgftnn
      121 gipeakdvvr idmvggfalq kvndersyfr tianmdmkld fvppslinfi srqlvgngfr
      181 lyqktvasvs nhdkdyskal gdplfalire alyasnksge vlevhgpkse alllrnksli
      241 ertqddthdi gkklcandha veippwkeqd tviksfgeie eeetegstqp eegdnitfda
      301 ngvndkrkfs irpevqdalr tldkvislvq qhgfnsrtsf sdeetanlee gavylkaedn
      361 vkatseqfae nlemtldksq nssdindtrd edsnsfarea nhnkevpvsp lpnvskpnnq
      421 valsfyrngt vevngfheng lsevkklsnr rkhrlgcfgf nsg
//
LOCUS       XP_016706954             591 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 26 [Gossypium hirsutum].
ACCESSION   XP_016706954
VERSION     XP_016706954.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706954.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..591
                     /product="calcium-dependent protein kinase 26"
                     /calculated_mol_wt=66206
     Region          142..399
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(148..152,156,169,171,204,220..223,227,229,265..266,
                     268,270..271,273,286..287,290,304..308,310)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(148..151,156,169,171,204,220..223,227,270..271,273,
                     286..287)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(152,227,229,265..266,268,270,290,304..308,310)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(286..294,304..308)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          442..580
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..591
                     /gene="LOC107921635"
                     /coded_by="XM_016851465.2:689..2464"
                     /db_xref="GeneID:107921635"
ORIGIN      
        1 mgnscaksaa teedenednk qdgnegeakd pgqseskepe esgsvrkqpp eemkivreed
       61 ktgkeqesks tekaaemtqr qqskshpqrl nskpsqlagf nkegsktgnk trkahnvkrq
      121 scaglqvgsv lqtktghlke yynlgrklgq gqfgttflci ekgtgkeyac ksiakrkltt
      181 tedvddvkre iqimhhlagh pnvisikgsy ednmavhvvm elcaggelfd rivkrghyse
      241 rkaaeiarii vavveachsm gvmhrdlkpe nflfvnneed splkaidfgl siffkpgdil
      301 ndvvgspyyv apevlrkhyg peadvwsagv ityillsgvp pfwgeteqei fnevlngeld
      361 fssdpwpnis esakdlvtkm ldrdtkrrik ahevlrhpwv qvdgvapdkp ldsvvlsrmk
      421 qfsamdklkk malrviaqrl seeeiaglke mfkmidadns gqitydelke glkrfganla
      481 esefralmqa adinnsgtid yeefvtatlh lnkierednl laafsyfdrd ssgyitldel
      541 qkacqefgiq dihldeimre vdqdndgrid ynefvammqe gnpklgkkgk e
//
LOCUS       XP_016706799             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706799
VERSION     XP_016706799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..176
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19834
     CDS             1..176
                     /gene="LOC107921462"
                     /coded_by="XM_016851310.2:527..1057"
                     /db_xref="GeneID:107921462"
ORIGIN      
        1 msrriivrtp ttrrqpllqs rstssslsmv ddgsrysrss ssrksakfge lcggtaaeca
       61 avccccpcgi anllvlviyk vpaglcrral rqkrrkklqk kglfqprnyg srhgceerel
      121 rnhpmvcake lmvemevsee adkalfqlee emwerfhgtg fwispsqrer dsstin
//
LOCUS       XP_040942492             745 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 22 [Gossypium hirsutum].
ACCESSION   XP_040942492
VERSION     XP_040942492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086558.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..745
                     /product="ABC transporter G family member 22"
                     /calculated_mol_wt=82333
     Region          140..742
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..745
                     /gene="LOC107922265"
                     /coded_by="XM_041086558.1:118..2355"
                     /db_xref="GeneID:107922265"
ORIGIN      
        1 mekssnsttl grtksdqlle tlaavfkspt sqsdlapgts dsggtlsrks srrlvvgasp
       61 arssgggsrn ahirkarsaq mkldleelss gaalsrassa slgfsfsftg ftvppdeiag
      121 sklfsdddip edieagicrp kfqaeptlpi ylkfrevsyk vvikgmtsse erdilngisg
      181 dvspgevval mgpsgsgktt llnilggrlt hsavagsvty ndqpyskflk srigfvtqdd
      241 vlfphltvke tltyaallrl pltltkqqke kraldviyel gldrcqdtmi ggsfvrgvsg
      301 gerkrvcign eiiikpsllf ldeptsglds ttalrtvetl qdiaeagktv lttihqpssr
      361 lfhkfdkliv lgkgnllyfg kaseatdyfs sigcspliam npaeflldla ngnlndisvp
      421 peledrvqme nsetetrngk pppqvvheyl veayelrfse nenklmdplh ldeepklkvl
      481 sskrqwgasw wqqycilfir gikerrhdyf swlritqvls taiilgllww qsdsktsrgr
      541 qdqagllffi avfwgffpvf taiftfpqer amlskeraad myrlsayfla rttsdlpldl
      601 ilpvlfilvv yfmaglrlsa gpfflsmltv flcivaaqgl glaigatlmd lkrattlasv
      661 tvmtfmlagg ffvervpvfi swirylsfny htyklllkvq yqdmvpplkg iqtdngsrev
      721 galvamifgy rllaylslrr mklhs
//
LOCUS       XP_040942493             745 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 22 [Gossypium hirsutum].
ACCESSION   XP_040942493
VERSION     XP_040942493.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086559.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..745
                     /product="ABC transporter G family member 22"
                     /calculated_mol_wt=82333
     Region          140..742
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..745
                     /gene="LOC107922265"
                     /coded_by="XM_041086559.1:51..2288"
                     /db_xref="GeneID:107922265"
ORIGIN      
        1 mekssnsttl grtksdqlle tlaavfkspt sqsdlapgts dsggtlsrks srrlvvgasp
       61 arssgggsrn ahirkarsaq mkldleelss gaalsrassa slgfsfsftg ftvppdeiag
      121 sklfsdddip edieagicrp kfqaeptlpi ylkfrevsyk vvikgmtsse erdilngisg
      181 dvspgevval mgpsgsgktt llnilggrlt hsavagsvty ndqpyskflk srigfvtqdd
      241 vlfphltvke tltyaallrl pltltkqqke kraldviyel gldrcqdtmi ggsfvrgvsg
      301 gerkrvcign eiiikpsllf ldeptsglds ttalrtvetl qdiaeagktv lttihqpssr
      361 lfhkfdkliv lgkgnllyfg kaseatdyfs sigcspliam npaeflldla ngnlndisvp
      421 peledrvqme nsetetrngk pppqvvheyl veayelrfse nenklmdplh ldeepklkvl
      481 sskrqwgasw wqqycilfir gikerrhdyf swlritqvls taiilgllww qsdsktsrgr
      541 qdqagllffi avfwgffpvf taiftfpqer amlskeraad myrlsayfla rttsdlpldl
      601 ilpvlfilvv yfmaglrlsa gpfflsmltv flcivaaqgl glaigatlmd lkrattlasv
      661 tvmtfmlagg ffvervpvfi swirylsfny htyklllkvq yqdmvpplkg iqtdngsrev
      721 galvamifgy rllaylslrr mklhs
//
LOCUS       XP_016707694             597 aa            linear   PLN 06-AUG-2024
DEFINITION  prolycopene isomerase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707694
VERSION     XP_016707694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..597
                     /product="prolycopene isomerase, chloroplastic"
                     /calculated_mol_wt=65470
     Region          80..574
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..597
                     /gene="LOC107922266"
                     /coded_by="XM_016852205.2:587..2380"
                     /db_xref="GeneID:107922266"
ORIGIN      
        1 mslgcyqtvl fptegksdfs swnplknsql kgnkisgvkf snfqvsqrrk cipmklksll
       61 svdsaveieg kkgvntgsky daivigsgig glvaatqlav kgakvlvlek yvipggssgy
      121 yqrdgytfdv gssvmfgfsd kgnlnlitqa laavgremev ipdpttvhfh lpnnlsvqvh
      181 reysefinel mskfphekeg ilkfygecwk ifnalnslql ksleepiylf gqffqkplec
      241 ltlayylpqn agdiarkyvk dpdllsfida ecfivstvna lrtpminagm vlcdrhfggi
      301 nypvggvggi akslaeglid qgseilykan vtniiidqgk avgvkisdgr effaqtiisn
      361 atrwdtfgkl lkaenlpkee enfqkvyvka psflsihmgv kadvlppdtd chhfvleddw
      421 trleepygsi flsiptvlds slapkgrhil hifttspled weglppkdye akkeliadei
      481 igrlekklfp glkssivfke vgtpkthrry lardmgtygp mprqipkgll gmpfnttgis
      541 glycvgdscf pgqgviavaf sgvmcahrva adiglekksp ildaallgll gwlrtla
//
LOCUS       XP_040942494             542 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942494
VERSION     XP_040942494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086560.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..542
                     /product="myosin-binding protein 7 isoform X1"
                     /calculated_mol_wt=61697
     Region          72..162
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..542
                     /gene="LOC107922234"
                     /coded_by="XM_041086560.1:595..2223"
                     /db_xref="GeneID:107922234"
ORIGIN      
        1 mesevfsppi prdlvkccdc ncttcslisd psstwfrtvk rkydefetfn kfyvpvfdly
       61 snpkvqiene caalretvss qqatiqdlyr eleeernass saateamsmi lklqrekaei
      121 qmearqfkcf aeeklahdqq eimdledlly kreqaiqalt ceaqaykhrm msygfteaev
      181 egepdglirn vaenfgdsgd llqydyqppk cnlnenpgdd vediekyafg eipcarehlr
      241 nleqricqme rnpsssqlsq ldgyipgtkn vpekvivghs prqsrhsrrl ssdssttfla
      301 keipseftgn sprfisemdk isgsrrmdna sevgddmsdr vytidsihtg vpykgapepk
      361 pgvgdcldya ytprdvlnlp dgcdpnikkl ytrlqalead resmrqaiis mrtdnaqlvl
      421 lkeiaqqlck empperqltv rkpsilgslp fvsffkasiw ivtkqcrlat asrqgpttet
      481 vemsfkytsl nliqlllhmk plivmglnkl scidcasflm dsleqllvyf svffyftlff
      541 yd
//
LOCUS       XP_016707639             505 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707639
VERSION     XP_016707639.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852150.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..505
                     /product="myosin-binding protein 7 isoform X2"
                     /calculated_mol_wt=57522
     Region          72..162
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..505
                     /gene="LOC107922234"
                     /coded_by="XM_016852150.2:786..2303"
                     /db_xref="GeneID:107922234"
ORIGIN      
        1 mesevfsppi prdlvkccdc ncttcslisd psstwfrtvk rkydefetfn kfyvpvfdly
       61 snpkvqiene caalretvss qqatiqdlyr eleeernass saateamsmi lklqrekaei
      121 qmearqfkcf aeeklahdqq eimdledlly kreqaiqalt ceaqaykhrm msygfteaev
      181 egepdglirn vaenfgdsgd llqydyqppk cnlnenpgdd vediekyafg eipcarehlr
      241 nleqricqme rnpsssqlsq ldgyipgtkn vpekvivghs prqsrhsrrl ssdssttfla
      301 keipseftgn sprfisemdk isgsrrmdna sevgddmsdr vytidsihtg vpykgapepk
      361 pgvgdcldya ytprdvlnlp dgcdpnikkl ytrlqalead resmrqaiis mrtdnaqlvl
      421 lkeiaqqlck empperqltv rkpsilgslp fvsffkwivs fvfwkrkacr skhlyglspn
      481 nvgllllldk gprlrqwrcl sstqv
//
LOCUS       XP_016708088             209 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S5 [Gossypium hirsutum].
ACCESSION   XP_016708088
VERSION     XP_016708088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852599.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..209
                     /product="40S ribosomal protein S5"
                     /calculated_mol_wt=23070
     Region          22..209
                     /region_name="uS7_Eukaryote"
                     /note="Eukaryota homolog of Ribosomal Protein S7; cd14867"
                     /db_xref="CDD:271246"
     Site            order(22,52..54,56..59,92,96)
                     /site_type="other"
                     /note="S9 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     Site            order(56,58,62..65,68,76,79,81..85,89..93,96,136..138,140,
                     150,157,164,167,173..174)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:271246"
     Site            order(100,103..104,107,173,175..176)
                     /site_type="other"
                     /note="S25 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     Site            order(135,138,140,209)
                     /site_type="other"
                     /note="S11 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     CDS             1..209
                     /gene="LOC107922520"
                     /coded_by="XM_016852599.2:224..853"
                     /db_xref="GeneID:107922520"
ORIGIN      
        1 mstavaatet skdptqptse vklfnrwsfe dvqvtdisls dyigvqaskh atyvphtagr
       61 ysvkrfrkaq cpiverltns lmmhgrnngk klmavrivkh ameiiylltd qnpiqvivda
      121 iinsgpreda trigsagvvr rqavdisplr rvnqaiyllt tgaresafrn iktiaeclad
      181 elinaakgss nsyaikkkde iervakanr
//
LOCUS       XP_016706208              65 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S28 [Gossypium hirsutum].
ACCESSION   XP_016706208
VERSION     XP_016706208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850719.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..65
                     /product="40S ribosomal protein S28"
                     /calculated_mol_wt=7415
     Region          6..65
                     /region_name="S1_S28E"
                     /note="S28E, S1-like RNA-binding domain. S1-like
                     RNA-binding domains are found in a wide variety of
                     RNA-associated proteins. S28E protein is a component of
                     the 30S ribosomal subunit. S28E is highly conserved among
                     archaea and eukaryotes. S28E may control...; cd04457"
                     /db_xref="CDD:239904"
     Site            order(11,27,39,41)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:239904"
     CDS             1..65
                     /gene="LOC107920895"
                     /coded_by="XM_016850719.2:111..308"
                     /db_xref="GeneID:107920895"
ORIGIN      
        1 mdsqikfavv vkimgrtgsr gqvtqvrvkf lddqnrfimr nvkgpvregd iltllesere
       61 arrlr
//
LOCUS       XP_016707621             117 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L3-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707621
VERSION     XP_016707621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852132.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="60S ribosomal protein L3-2 isoform X1"
                     /calculated_mol_wt=13032
     Region          1..>95
                     /region_name="PTZ00103"
                     /note="60S ribosomal protein L3; Provisional"
                     /db_xref="CDD:240267"
     CDS             1..117
                     /gene="LOC107922221"
                     /coded_by="XM_016852132.2:612..965"
                     /db_xref="GeneID:107922221"
ORIGIN      
        1 mshrkfelpr hgflgflprk rasrhrgkvk afskddptkp crltaflgyk agmthivrev
       61 ekpgsklhkk etceavtiie tppivgagal dysltcwlsr vvfgsnwlrl gqnsgrt
//
LOCUS       XP_040942495             117 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L3-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942495
VERSION     XP_040942495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086561.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="60S ribosomal protein L3-2 isoform X1"
                     /calculated_mol_wt=13032
     Region          1..>95
                     /region_name="PTZ00103"
                     /note="60S ribosomal protein L3; Provisional"
                     /db_xref="CDD:240267"
     CDS             1..117
                     /gene="LOC107922221"
                     /coded_by="XM_041086561.1:189..542"
                     /db_xref="GeneID:107922221"
ORIGIN      
        1 mshrkfelpr hgflgflprk rasrhrgkvk afskddptkp crltaflgyk agmthivrev
       61 ekpgsklhkk etceavtiie tppivgagal dysltcwlsr vvfgsnwlrl gqnsgrt
//
LOCUS       XP_040942496             103 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L3-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942496
VERSION     XP_040942496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086562.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..103
                     /product="60S ribosomal protein L3-2 isoform X2"
                     /calculated_mol_wt=11445
     Region          1..>95
                     /region_name="PTZ00103"
                     /note="60S ribosomal protein L3; Provisional"
                     /db_xref="CDD:240267"
     CDS             1..103
                     /gene="LOC107922221"
                     /coded_by="XM_041086562.1:612..923"
                     /db_xref="GeneID:107922221"
ORIGIN      
        1 mshrkfelpr hgflgflprk rasrhrgkvk afskddptkp crltaflgyk agmthivrev
       61 ekpgsklhkk etceavtiie tppivgagal dysltcwlss kni
//
LOCUS       XP_016707833             559 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707833
VERSION     XP_016707833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..559
                     /product="uncharacterized protein"
                     /calculated_mol_wt=61104
     Region          211..292
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          253..311
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          <379..>553
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..559
                     /gene="LOC107922348"
                     /coded_by="XM_016852344.2:238..1917"
                     /db_xref="GeneID:107922348"
ORIGIN      
        1 mmeaspstgp pastdapatm dppattdppt ttdpptstep pagdvenvpe kikdakeagp
       61 afhcdlcdae llfkitqall pglatacvdn ttggvfrspg svaadlrkem veyltqrtet
      121 yvaesvvleg gpeaeaydnp ydiiaflide favskrnlfs rvsalllser redriddfaq
      181 qmeingfwpv dkreaivqtl lknvdvkney hcsmkfetae elslhmptcs frvmtcdneg
      241 cddrfsanks ekhdsscpfk iipceqkcpd fimrrdmdrh citvcpmkli ncpffsvgck
      301 aavphckide hqseelhyhi lyilqgfhkg aseevlkerv dqieemsagr lagaknvrsl
      361 tskvkdldar lppvvietkk neeetsetea kpesveasgt nedaekaagt keatnseaap
      421 aseatpsskd seeakktete nskakplsqe spplkkesee asknevevpe anpasqevpp
      481 lkkdseeack teikdseakp psqevepvkk dseqalktva kdsetvaqss edsttnkdte
      541 eaaktensvk gseistned
//
LOCUS       XP_016708213              74 aa            linear   PLN 06-AUG-2024
DEFINITION  flap endonuclease 1 [Gossypium hirsutum].
ACCESSION   XP_016708213
VERSION     XP_016708213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..74
                     /product="flap endonuclease 1"
                     /calculated_mol_wt=8149
     Region          <41..>74
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     CDS             1..74
                     /gene="LOC107922612"
                     /coded_by="XM_016852724.2:231..455"
                     /db_xref="GeneID:107922612"
ORIGIN      
        1 mvshfticcl hhgdgekasl ftsfiltass fgflfssdas yvfdgqppdl ekqelakryl
       61 kradatedlq eame
//
LOCUS       XP_016707199             331 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 31 [Gossypium hirsutum].
ACCESSION   XP_016707199
VERSION     XP_016707199.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851710.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707199.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..331
                     /product="peroxidase 31"
                     /calculated_mol_wt=36618
     Region          25..326
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(55,58..59,61..62,65..66,96,98,164..167,173,177,187,
                     190..191,193..194,196..200,202..203,246,269,271,303)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(55,58..59,61..62,65,94,96,98,164..166,173,177,187,
                     190..191,193..194,196..200,203,246,269,271,303)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(62,92..93,164..167,200,202..203)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(67,70,74,76,195,247,250,253,255)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..331
                     /gene="LOC107921888"
                     /coded_by="XM_016851710.2:67..1062"
                     /db_xref="GeneID:107921888"
ORIGIN      
        1 mafpnlvllf tlfsflllfr stqsklsady ynktcpkfqn lmqtilaekq lsapttaaat
       61 lrvffhdcfv ngcdssmlia snafnkserd anvnlsvagd afdlitrvkt alelgcpgvv
      121 scsdilavsa rdlvvmvggp fyevvlgrkd sresnpsivd knlpkaltpm nellslfssk
      181 gfsaeemval vgahtigfsh ckefanrifn fsktsefdpa ynpvfaqglr klcanytksp
      241 amsafndvyt pgkfdnmyyk nlqnglglls sdqamvtdnr tkpfvdrfaa netaffdtfa
      301 rsmeklsvyk vkenndgdvr rrcdqfntlq v
//
LOCUS       XP_016729630             616 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase 1 beta-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016729630
VERSION     XP_016729630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..616
                     /product="polygalacturonase 1 beta-like protein 3"
                     /calculated_mol_wt=67652
     Region          398..614
                     /region_name="BURP"
                     /note="BURP domain; cl03923"
                     /db_xref="CDD:470910"
     CDS             1..616
                     /gene="LOC107940699"
                     /coded_by="XM_016874141.2:137..1987"
                     /db_xref="GeneID:107940699"
ORIGIN      
        1 mfnlwnllfl sfvhfssfsv tlggvsgnpf tpkssfiryw nkevhreipn thfllskvsp
       61 ltavdsasfs klaahnnlas rlpsfcssak lfcfpdlsps lekhskdvnf afyldrnftn
      121 ygsdrlagld sfknysendn vvvdsfrrys rdsaghkdqf snyasasnvv dqsfntygga
      181 atggsgnfnn ynhevnvpnl rftsysddsn ghgqtfthyt eetnagqqsf snygkngngv
      241 pndftsygkd snvmgsdfsg ygktangakd tftsyafdsn npvngfksyg dggnaavdsf
      301 ssyrdqsnvg dssfqsyaks sngakvdfdn ygqsfnegte kftgygqgad gqsigfkiyg
      361 rnttfkdytk kgvtfsrysn esstasgkvv vskwvepgkf frekmlkrgm vipmpdikdk
      421 mparsflprt ilskipfsss eidqlkrifh agdnstlati mldalkecer ppspgetkrc
      481 vgsaedmvdf atsvlgrnve vrttqnvngs kknimigsvg kinggkvtks vschqslypy
      541 llyychsvpk vrvyeadild pnsmekinhg vaichldtss wssghgafla lgsgpgriev
      601 chwifendmt wtiads
//
LOCUS       XP_040942497             480 aa            linear   PLN 06-AUG-2024
DEFINITION  heparan-alpha-glucosaminide N-acetyltransferase [Gossypium
            hirsutum].
ACCESSION   XP_040942497
VERSION     XP_040942497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086563.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="heparan-alpha-glucosaminide N-acetyltransferase"
                     /calculated_mol_wt=54323
     Region          44..480
                     /region_name="COG4299"
                     /note="Predicted acyltransferase, DUF1624 domain [General
                     function prediction only]"
                     /db_xref="CDD:443440"
     CDS             1..480
                     /gene="LOC107955810"
                     /coded_by="XM_041086563.1:57..1499"
                     /db_xref="GeneID:107955810"
ORIGIN      
        1 madpekieeg laheenmekk gdklveqqqq qqlqeqqqpl vkqktkrvat ldafrgltiv
       61 lmilvddagg syaridhspw ngctladfvm pfflfivgva ialalkkipk imdaikkicl
      121 rtlkllfwgv llqggyshap ndlvygvdmk lirwcgilqr ialvyfivav ietlttkhrp
      181 tvlepgyssi ftaycwqwlg gfvafviymt ttyslyvpdw sfvvstdskt tqytvkcgmr
      241 ghlgpacnav gyvdrevwgi nhlymypvwq rlkacthssp ssgeiredap swcrapfepe
      301 gllssilail sgtigihygh vlihfkghse rlkqwvsial gllivaiilh ftdaipinkq
      361 lysfsymcft agaagivfsv fyilidvwgw rtpflflewi gmnamliyvl gaqgilpafv
      421 ngwyykstnn tlvfwiqkhv fnnvwkserl gtllyvifae itfygvlsgi lhklgiywkl
//
LOCUS       XP_016743606             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743606
VERSION     XP_016743606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=26116
     CDS             1..235
                     /gene="LOC107952914"
                     /coded_by="XM_016888117.2:171..878"
                     /db_xref="GeneID:107952914"
ORIGIN      
        1 maktstiflc sfsfssfpsl srwretnsfl pspfrfsnrp spflrfsskp sdsgnflgdd
       61 sfgffpwspd dndlewvqee rvtlftsdgl iqiggsmvpr rlsssdkkqg klkssqrfqr
      121 fqesdymdpn qglclgalfd iaatngldmg rrlciigfcr siemlsdvve dtvlehggev
      181 vaaekaikgg lheklsmtva vpylwgvppa sdtlhlavrs gggivekvyw qwdfl
//
LOCUS       XP_016743607             234 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743607
VERSION     XP_016743607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..234
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=25988
     CDS             1..234
                     /gene="LOC107952914"
                     /coded_by="XM_016888118.2:143..847"
                     /db_xref="GeneID:107952914"
ORIGIN      
        1 maktstiflc sfsfssfpsl srwretnsfl pspfrfsnrp spflrfsskp sdsgnflgdd
       61 sfgffpwspd dndlewvqee rvtlftsdgl iqiggsmvpr rlsssdkqgk lkssqrfqrf
      121 qesdymdpnq glclgalfdi aatngldmgr rlciigfcrs iemlsdvved tvlehggevv
      181 aaekaikggl heklsmtvav pylwgvppas dtlhlavrsg ggivekvywq wdfl
//
LOCUS       XP_016743605             504 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine--tRNA ligase, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016743605
VERSION     XP_016743605.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888116.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..504
                     /product="histidine--tRNA ligase,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=56459
     Region          2..504
                     /region_name="PLN02530"
                     /note="histidine-tRNA ligase"
                     /db_xref="CDD:178145"
     CDS             1..504
                     /gene="LOC107952913"
                     /coded_by="XM_016888116.2:144..1658"
                     /db_xref="GeneID:107952913"
ORIGIN      
        1 msplssslln prlsfplkpl flfsqssfap rkfqiprqfv sakrktfsal aseqssatdn
       61 ggrsggggrs galspspvve evqridvnpp kgtrdfpped mrlrtwlfnh frevsrlfgf
      121 eevdypvles evlfirkage eirdqlycfe drgnrrvalr peltpslarl viqkgkslsl
      181 plkwfaigqc wryermtrar rrehyqwnmd ilglpevtae aelissivaf fkrigitesd
      241 vgfkvssrkv lqevlrcysv penlfgkvci iidkiekipi deikrelnat glseeaieel
      301 lqvlsikslt kleeilggag eavaelkelf slaekfgyse wiqfdasvvr glayytgivf
      361 egfdrqgklr aicgggrydr llstfggddv pacgfgfgda vivellkekg llpklnlevd
      421 nivcaldydl qgvaaevatk lrekgqsvdl vleskplkwv fkraartnaq rlvlvgntew
      481 qkgmvgvkil ssgeqyeikl dele
//
LOCUS       XP_040942499             210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942499
VERSION     XP_040942499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086565.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..210
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24309
     Region          2..123
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..210
                     /gene="LOC107921672"
                     /coded_by="XM_041086565.1:260..892"
                     /db_xref="GeneID:107921672"
ORIGIN      
        1 miftrimslk sakkiwdylk vgyagderir gikvlnlikd felqkmkese lvkeyfdrlf
       61 siankvrllg selndsrive kllvtvpekf eatittlent kdlskislve llnalqvqeq
      121 rrsmrqegvi egalpvkhqd nnrykkrknl rtsrrvekih qaiirrakde vsrnpthivt
      181 ivrrnvihhs nvgkdltlna pnainldmkq
//
LOCUS       XP_016707179             333 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein WIP2 [Gossypium hirsutum].
ACCESSION   XP_016707179
VERSION     XP_016707179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851690.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..333
                     /product="zinc finger protein WIP2"
                     /calculated_mol_wt=37942
     Region          257..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          277..300
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..333
                     /gene="LOC107921855"
                     /coded_by="XM_016851690.2:50..1051"
                     /db_xref="GeneID:107921855"
ORIGIN      
        1 madnhysnff sgwfkfnpld qhypspihpl qkpnphpqns hkngttnlnp flhyrttyss
       61 pppsppvrea lpllslsptr hykdedgvyq dqdqeqhsct amdvngeddd etvtvalhvg
      121 lpsasasela svlsassemt eqddeypinr lnkrqywipt psqiligpsq fscpvccktf
      181 nrynnmqmhm wahgsqyrkg teslrgtqpt amlrlpcycc apgcrnnidh prpkplkdfr
      241 tlqthykrkh gikpfmcrkc gkafavrgdw rthekncgkl wycicgsdfk hkrslkdhik
      301 afgdghqvya tddleeddde paseveqhng slh
//
LOCUS       XP_040942500             458 aa            linear   PLN 06-AUG-2024
DEFINITION  tryptophan aminotransferase-related protein 4 [Gossypium hirsutum].
ACCESSION   XP_040942500
VERSION     XP_040942500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086566.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..458
                     /product="tryptophan aminotransferase-related protein 4"
                     /calculated_mol_wt=51070
     Region          <49..89
                     /region_name="EGF_alliinase"
                     /note="Alliinase EGF-like domain; pfam04863"
                     /db_xref="CDD:398501"
     Region          91..449
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(162..164,195,240,263,283,285..286,294)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99734"
     Site            order(165,205,256,292..294,324,331)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:99734"
     Site            286
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99734"
     CDS             1..458
                     /gene="LOC121213677"
                     /coded_by="XM_041086566.1:69..1445"
                     /db_xref="GeneID:121213677"
ORIGIN      
        1 mvksvyvasl assmvvnllf miiniyvgge wslswsskae aeaeavseia csghrrayld
       61 glvgdgnepv cecntcytgp ncshfiphct adadsgdplf lepfwmqhst ssalvvsgwh
      121 rmsysfndnt lisqhlesli rklhafvgta vtqdryivfg agstqvlraa ayalslanss
      181 sshsptrvva svpyyvlykq qveyfnsekf kyegdahtwr nrsesdastn viefvtspnn
      241 pdgllnkavl hgpnaktiyd rayywphftp ipapadedlm vftlskltgh agsrfgwavv
      301 kdetvfnkmv lhmqvnsigv skdtqlrafk llkaileegt qifdfayqtm kskwerlatt
      361 lslsnrfslq kinpqycffy nkvresspay awvkcekeed kgcyavlkaa tiigrkgnvf
      421 gsednyvrls lvrsqddldi liqrlqklvs eedgaism
//
LOCUS       XP_016707213             331 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 31 [Gossypium hirsutum].
ACCESSION   XP_016707213
VERSION     XP_016707213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..331
                     /product="peroxidase 31"
                     /calculated_mol_wt=36761
     Region          25..326
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(55,58..59,61..62,65..66,96,98,164..167,173,177,187,
                     190..191,193..194,196..200,202..203,246,269,271,303)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(55,58..59,61..62,65,94,96,98,164..166,173,177,187,
                     190..191,193..194,196..200,203,246,269,271,303)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(62,92..93,164..167,200,202..203)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(67,70,74,76,195,247,250,253,255)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..331
                     /gene="LOC107921914"
                     /coded_by="XM_016851724.2:92..1087"
                     /db_xref="GeneID:107921914"
ORIGIN      
        1 mafpnlvllf klfsflllfr stqsklsady ynktcpkfqn imqtilaekq lsapttaaat
       61 lrvffhdcfv ngcdssmlia sngfnkserd anvnlsvagd afdlitrvkt alelecpgvv
      121 scsdilavsa rdlvvmvggp fyevllgrkd sresnpsivd knlpkaltpm nellslfssk
      181 gfsaeemval vgahtigfsh ckefanrifn fsktsefdpa ynpvfaqglr klcanytksp
      241 amsafndvyt pgkfdnmyyk nlqkglglls sdqamvtdnr tkpfvdrfaa netaffdmfa
      301 rsmeklsvyk vkenndgdvr rrcdqfntlq v
//
LOCUS       XP_016753239             153 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 423 [Gossypium hirsutum].
ACCESSION   XP_016753239
VERSION     XP_016753239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897750.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..153
                     /product="MLP-like protein 423"
                     /calculated_mol_wt=17179
     Region          2..149
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(7,11,24..25,28,32,39,58,60..61,67,70,72,84,86,88,
                     92..93,100,102,104,106,115,117,119,121,133..134,136..137,
                     140..141,143..145)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(47..50,52..56)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..153
                     /gene="LOC107961673"
                     /coded_by="XM_016897750.2:279..740"
                     /db_xref="GeneID:107961673"
ORIGIN      
        1 macsgqlhve velkslaekv wetirdstki fpqalshdyk sievlegdgk apgsirliny
       61 aegspivkvs keriesvdea ekiyvysifd gdlmkyyktf iakinvipkg esslvkwsce
      121 fekaseeipd psvikefavk nfveiddylh tka
//
LOCUS       XP_016708117            1135 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase BRI1-like 2 [Gossypium hirsutum].
ACCESSION   XP_016708117
VERSION     XP_016708117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1135
                     /product="serine/threonine-protein kinase BRI1-like 2"
                     /calculated_mol_wt=124441
     Region          42..1134
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          104..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          302..326
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          327..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          376..399
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          400..423
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          424..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          448..471
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          472..495
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          496..517
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          520..591
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          545..607
                     /region_name="Island"
                     /note="Brassinosteroid receptor island domain; pfam20141"
                     /db_xref="CDD:466303"
     Region          612..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          636..659
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          660..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1135
                     /gene="LOC107922544"
                     /coded_by="XM_016852628.2:348..3755"
                     /db_xref="GeneID:107922544"
ORIGIN      
        1 megkpvqlsy hlpliliftv yisvsaaeqt vvpsiktdav allgfkkmid ndptgvlsgw
       61 kletspclwy gvkcssgrvv qldlnqcsly gtiffnplas ldmlssldls gnmftvnstt
      121 llllpyglkr lqlsdtglfg lfpdtifskl pnleyvnlsh nnltgtlpdn lfssnpdklq
      181 vldlsannit gsisglklen scnsllvldl ssnrfvdsip vylsnctklt alnlslnslt
      241 geipsslgel kslqrldlsf nhltgwipse lgkacdslla lrlsfnnfsg pvpsslsscs
      301 ylqlldlsnn nitgpfpdsi lenlgaleal llsnniifap fpssisycks lrivdlssnk
      361 ffgtippdic pgaaaleelk ipdnlvagqi ppqlsqcpql rtvdfslnyl ngsiptelga
      421 lanleqliaw fndlegqipk elgkcsklkd lilnnnrlsg eipvelfncs nlewisltsn
      481 eltgsipref gllsrlavlq lannslsgei pgelgnctsl vwldlnsnkl tgeipprlgr
      541 qlgakslsgi lsgntlvfvr nvgnsckgvg gllefagirp erllqisnlk scdftrmysg
      601 avlslftqyq tleyldlsyn qlrgkipdei gemvalqvle lahnqlsgei psslgqlrnl
      661 gvfdashnrl qgqipesfsn lsflvqidls yneltgpipq rgqlstlpat qyannpglcg
      721 vplpecrngn nqaatssdld ggkrrrkpaa vswansivlg ilisiasici livwaiamra
      781 rrreaeevkm lnrlqavhaa ttwkiekeke plsinvatfq rqlrklkfst lieatngfsa
      841 asligcggfg evfkatlkdg ssvaikklir lscqgdrefm aemetlgkik hrnlvpllgy
      901 cmigeerllv yefmeygsle emlhgrtkar drriltweer kkiargaakg lcflhhncip
      961 hiihrdmkss nvlldhemea rvsdfgmarl isaldthlsv stlagtpgyv ppeyyqsfrc
     1021 tvrgdvysfg vvllelltgk rptdkedfgd tnlvgwvkmk vreqkhmevi dpeillvtkg
     1081 tdeaeakevk emmryleitl qcvddfpskr psmlqvvaml relmpgsang ssnsa
//
LOCUS       XP_016706796             329 aa            linear   PLN 06-AUG-2024
DEFINITION  deoxymugineic acid synthase 1-B [Gossypium hirsutum].
ACCESSION   XP_016706796
VERSION     XP_016706796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851307.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="deoxymugineic acid synthase 1-B"
                     /calculated_mol_wt=36852
     Region          24..302
                     /region_name="AKR_AKR4A_4B"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); cd19124"
                     /db_xref="CDD:381350"
     Site            order(30..31,34,59,64,94,127..128,173..174,195,221..227,
                     254,269..272,277,281)
                     /site_type="active"
                     /db_xref="CDD:381350"
     Site            order(59,64,94,127)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
     CDS             1..329
                     /gene="LOC107921459"
                     /coded_by="XM_016851307.2:73..1062"
                     /db_xref="GeneID:107921459"
ORIGIN      
        1 melstiagqs iptfplcstd ekaipllgfg tteypfgasi htlketilea iklgyrhfdt
       61 aaiylseqpl geaisdalrl gliksrdelf itsklwcsda hhdfvlpalk ktlqnlkley
      121 lnlflihwpl slkpgkyefp fqkedivpfd pksvweamee cqglgltksi gvsnfsckkl
      181 etilstakip pavnqvemnp lwqqkklrkf ceekgilvea ysplgakgta wgtnrvmece
      241 vlkeiahakg kslaqvclrw aheqgvcalv ksfnkermkq nldifywklt adeshkisql
      301 pqckgfpgaa flsddgpyks veelwdgei
//
LOCUS       XP_016706571             340 aa            linear   PLN 06-AUG-2024
DEFINITION  non-functional NADPH-dependent codeinone reductase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016706571
VERSION     XP_016706571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851082.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="non-functional NADPH-dependent codeinone
                     reductase 2"
                     /calculated_mol_wt=38219
     Region          31..313
                     /region_name="AKR_AKR4A_4B"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); cd19124"
                     /db_xref="CDD:381350"
     Site            order(41..43,70,75,105,138..139,184..185,206,232..238,265,
                     280..283,288,292)
                     /site_type="active"
                     /db_xref="CDD:381350"
     Site            order(70,75,105,138)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
     CDS             1..340
                     /gene="LOC107921200"
                     /coded_by="XM_016851082.2:62..1084"
                     /db_xref="GeneID:107921200"
ORIGIN      
        1 mdartkmqes ssqlsatsyq svptfplhst nekaipllgf gtaeypfgas idtmkqtile
       61 aievgyrhfd taalyqteqp lgeaisdalr lgliksrdel fitsklwcsd ahhdcvlpal
      121 kktlknlkle yldlylihwp vsvkpgeyel pvkkkdlvpi dlksvweame ecqalgltks
      181 igvsnfsckk letilstaki ppavnqvemn pmwqqkklrk fcdekgilie sysplgakgt
      241 lwgtnrvmec ellkeiaqak gkslaqvclr wayeqgvcvl vksfnkermk qnldifdwkl
      301 saeesrkisq lpqfkgfpag efvsddgpyk sleelwdgei
//
LOCUS       XP_016688705             730 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transporter 17 [Gossypium hirsutum].
ACCESSION   XP_016688705
VERSION     XP_016688705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833216.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..730
                     /product="probable potassium transporter 17"
                     /calculated_mol_wt=81063
     Region          55..728
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..730
                     /gene="LOC107906235"
                     /coded_by="XM_016833216.2:199..2391"
                     /db_xref="GeneID:107906235"
ORIGIN      
        1 mdlqsgaava lpellidsas gtshhldslh fplhnttdsv mlqssdnktg rwsnlllayk
       61 tlgvvfgglv tsplyvypsm hlnspteedy lgiysimfwt ltligvvkya cialkaddqg
      121 eggtfalysl lcrnmnigil sskssdvnss qarcvlnedn kqksrlgkvf etsmvarral
      181 lfiamlgtcm ligdgiltps isvlsamdgl rapfpsisks lvealsavvl filfllqkfg
      241 tsrvsflfsp imgawtlstp lvgiysiihh ypnifkalsp yyifhffwrn gkegwlmlgs
      301 tilcitgsea lfadlghfnr ssiqiaflft iypsliltya gqtayliknp ndhmdgfykf
      361 ipktiywpif iiatsaavva sqslisatfs vikqsvvldy fprvkvvhts snkegevysp
      421 evnyilmvfc iavilifgdg qdignafgvv vslvmlitti lltlvmiiiw rtpsllvgly
      481 fiiffmmegv yvsavltkip eggwipfais filsfimfgw yygrqrkiqy elthkidlgr
      541 lgmllsdpsv qrvpglcffy tkiqngltpi lghytknmrs lhkvtifttl ryllvpkvsp
      601 herivvkklg lrgvyacviq ygyadslnle ggnfvsqvld slqehiencs slpsdhmpvq
      661 eeiselseak tagvihvrgk arfhigksts ffdrfmlafy evlhkncrpa lpalgvplpq
      721 clevgmfyea
//
LOCUS       XP_040942501             594 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane 9 superfamily member 2 [Gossypium hirsutum].
ACCESSION   XP_040942501
VERSION     XP_040942501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086567.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..594
                     /product="transmembrane 9 superfamily member 2"
                     /calculated_mol_wt=68150
     Region          55..551
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..594
                     /gene="LOC121213679"
                     /coded_by="XM_041086567.1:165..1949"
                     /db_xref="GeneID:121213679"
ORIGIN      
        1 mrnfgnspaf vilgvfilsc vshvrsdasd hrykegdpvp lyankvgpfh npsetyryfd
       61 lpfcspdhvk ekkealgevl ngdrlvsapy klnfreekds svvckkklsk devvffrkav
      121 ekdyyfqmyy ddlpiwgfig kvdkegkadp seykyylykh iqfdvlynkd rvieisarmd
      181 phllvdlted kevdaefmyt vkwketgtpf ekrmerysms sslphhleih wfsiinscvt
      241 vllltgflat ilmrvlkndf ikygqdeeaa ddqeetgwky ihgdvfrfpk ykslfaaalg
      301 sgtqlftltv fifmlalvgv fypynrgalf talvviyalt sgiagyvats fycqlegtnw
      361 vrnllltgcl fcgplfltfc flntvaiays ataalpfgti vvivliwtlv tspllvlggi
      421 agknsraefq apcrttkypr eipplpwyrs aipqmamagf lpfsaiyiel yyifasvwgh
      481 riytiysilf ivfiillivt afitvaltyf qlaaedheww wrsflcggst glfiyaycly
      541 yyyarsdmsg fmqtsfffgy macicygffl llgtvgfras lffvrhiyrs ikce
//
LOCUS       XP_016725438             279 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725438
VERSION     XP_016725438.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869949.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725438.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=30163
     CDS             1..279
                     /gene="LOC107937129"
                     /coded_by="XM_016869949.2:278..1117"
                     /db_xref="GeneID:107937129"
ORIGIN      
        1 mgelnsmayt ssslhspslg wdlqnlgvln admslvmdgs gtapffphld sdfssgyled
       61 alleftepsk rrrlllyndh nqfnglndla mqgywnyscn wglsenfscm sqltsingvs
      121 depmstsvss eeanivteik tpeeaiprsp eeafdsssss ykvstaksks ffnkdtqiss
      181 gsedkmkkrv itrvvypfal vkpggiegdm tlndineril mpptrpvrhp vgdfacrpcv
      241 sadgpglsgk avvaltkiht qgrgtitiir tkggegggv
//
LOCUS       XP_016725439             278 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725439
VERSION     XP_016725439.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869950.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725439.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..278
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=30035
     CDS             1..278
                     /gene="LOC107937129"
                     /coded_by="XM_016869950.2:899..1735"
                     /db_xref="GeneID:107937129"
ORIGIN      
        1 mgelnsmayt ssslhspslg wdlqnlgvln admslvmdgs gtapffphld sdfssgyled
       61 alleftepsk rrrlllyndh nqfnglndla mgywnyscnw glsenfscms qltsingvsd
      121 epmstsvsse eanivteikt peeaiprspe eafdsssssy kvstaksksf fnkdtqissg
      181 sedkmkkrvi trvvypfalv kpggiegdmt lndinerilm pptrpvrhpv gdfacrpcvs
      241 adgpglsgka vvaltkihtq grgtitiirt kggegggv
//
LOCUS       XP_040942502             121 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid-transfer protein 4 [Gossypium hirsutum].
ACCESSION   XP_040942502
VERSION     XP_040942502.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086568.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..121
                     /product="non-specific lipid-transfer protein 4"
                     /calculated_mol_wt=12488
     Region          45..106
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..121
                     /gene="LOC121213681"
                     /coded_by="XM_041086568.1:412..777"
                     /db_xref="GeneID:121213681"
ORIGIN      
        1 malslkpycl vvlflfwisl nalvsdvgaa gecgrtpirs aaaslspclg aarnarakvp
       61 paccakvgal lrtsprclca illsplakqa gimpgiaiai pkkcnirnrq agkkcgrynv
      121 p
//
LOCUS       XP_016706766             121 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid-transfer protein 4 [Gossypium hirsutum].
ACCESSION   XP_016706766
VERSION     XP_016706766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851277.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..121
                     /product="non-specific lipid-transfer protein 4"
                     /calculated_mol_wt=12314
     Region          45..106
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..121
                     /gene="LOC107921426"
                     /coded_by="XM_016851277.2:55..420"
                     /db_xref="GeneID:107921426"
ORIGIN      
        1 malslkpycl vvlflisisl nalvsdagaa gecgrtpirs aaaslspclg aarnarakvp
       61 paccakvgal lrtsprclca illsplakqa gimpgiaiai pkkcnirnrq agkkcgrytv
      121 p
//
LOCUS       XP_016706281             498 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamate decarboxylase [Gossypium hirsutum].
ACCESSION   XP_016706281
VERSION     XP_016706281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850792.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="glutamate decarboxylase"
                     /calculated_mol_wt=56574
     Region          16..445
                     /region_name="Glu-decarb-GAD"
                     /note="glutamate decarboxylase; TIGR01788"
                     /db_xref="CDD:130848"
     Site            order(126..127,130,209,244,247,274,277)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99743"
     Site            277
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
     CDS             1..498
                     /gene="LOC107920960"
                     /coded_by="XM_016850792.2:905..2401"
                     /db_xref="GeneID:107920960"
ORIGIN      
        1 mvlsktasqs dvsvhstfas ryvrdqlprf rmpensipkd aayqiindel mldgnprlnl
       61 asfvttwmep ecnklimdai nknyvdmdey pvttelqnrc vnmiahlfna plgdsetavg
      121 vgtvgsseai mlaglafkrk wqnkrkaegk pydkpnivtg anvqvcwekf aryfevelke
      181 vklregyyvm dpakavemvd enticvaail gstlngefed vkllndllve knketgwdtp
      241 ihvdaasggf iapflypele wdfrlplvks invsghkygl vyagigwviw rnkedlpeel
      301 ifhinylgad qptftlnfsk gssqviaqyy qlirlgyegy rnimenchen amvlkeglek
      361 tgrfnivskd egvplvafsl kdnkrhdefe isemlrrfgw ivpaytmpad aqhitvlrvv
      421 iredfsrtla erlvidiqkv lheldtlpak vnaklamaee enskngtvkk taietqreit
      481 sywkkfvser ktnknkic
//
LOCUS       XP_040942503             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942503
VERSION     XP_040942503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086569.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15420
     Region          45..>111
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..136
                     /gene="LOC121213682"
                     /coded_by="XM_041086569.1:1..411"
                     /db_xref="GeneID:121213682"
ORIGIN      
        1 mskvlgfirg ydhdtwlvnk npllssscrg kdiwrppesd iiklnfdasy lpekkiaita
       61 vlardsrgkv agtdtylfee vgdafvaear acerallfar mmgfrrlive grltfwrwkd
      121 geeeyagtgl qvfril
//
LOCUS       XP_040942504             270 aa            linear   PLN 06-AUG-2024
DEFINITION  RHOMBOID-like protein 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942504
VERSION     XP_040942504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086570.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..270
                     /product="RHOMBOID-like protein 3 isoform X1"
                     /calculated_mol_wt=29790
     Region          57..184
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..270
                     /gene="LOC107962383"
                     /coded_by="XM_041086570.1:178..990"
                     /db_xref="GeneID:107962383"
ORIGIN      
        1 maaneifrpv rstpnqisht fgehfsfplq ppslspqsec ppskrleklg alkwdkvvhg
       61 nqtwrlitci wlhagvihll anmlslifig irleqqfgfs tlsvpfcsgs vlsslfiqrs
      121 isvgasgalf gllgamlsel ltnwtiytnk aaalitltvi ivinlavril phvdnfahig
      181 gfltgfllgf vlllrpqfgw vgrkhlpasa rvtskhkayq ylflviamvl livgftmglv
      241 mlfrgenghd hcswchylsc vptskwhcgn
//
LOCUS       XP_040942505             246 aa            linear   PLN 06-AUG-2024
DEFINITION  RHOMBOID-like protein 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942505
VERSION     XP_040942505.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086571.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..246
                     /product="RHOMBOID-like protein 3 isoform X2"
                     /calculated_mol_wt=26993
     Region          33..160
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..246
                     /gene="LOC107962383"
                     /coded_by="XM_041086571.1:1219..1959"
                     /db_xref="GeneID:107962383"
ORIGIN      
        1 mssliiascv ilccsfsssf rleklgalkw dkvvhgnqtw rlitciwlha gvihllanml
       61 slifigirle qqfgfstlsv pfcsgsvlss lfiqrsisvg asgalfgllg amlselltnw
      121 tiytnkaaal itltviivin lavrilphvd nfahiggflt gfllgfvlll rpqfgwvgrk
      181 hlpasarvts khkayqylfl viamvllivg ftmglvmlfr genghdhcsw chylscvpts
      241 kwhcgn
//
LOCUS       XP_040942506             201 aa            linear   PLN 06-AUG-2024
DEFINITION  RHOMBOID-like protein 3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942506
VERSION     XP_040942506.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086572.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="RHOMBOID-like protein 3 isoform X3"
                     /calculated_mol_wt=21912
     Region          <35..115
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..201
                     /gene="LOC107962383"
                     /coded_by="XM_041086572.1:1007..1612"
                     /db_xref="GeneID:107962383"
ORIGIN      
        1 macleimdwi gkigslkmgq gsawqsnvea yhlhlaarcg svlsslfiqr sisvgasgal
       61 fgllgamlse lltnwtiytn kaaalitltv iivinlavri lphvdnfahi ggfltgfllg
      121 fvlllrpqfg wvgrkhlpas arvtskhkay qylflviamv llivgftmgl vmlfrgengh
      181 dhcswchyls cvptskwhcg n
//
LOCUS       XP_040942507             803 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAM135B [Gossypium hirsutum].
ACCESSION   XP_040942507
VERSION     XP_040942507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086573.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..803
                     /product="protein FAM135B"
                     /calculated_mol_wt=90874
     Region          148..212
                     /region_name="DUF3657"
                     /note="Protein FAM135; pfam12394"
                     /db_xref="CDD:463558"
     Region          525..722
                     /region_name="DUF676"
                     /note="Putative serine esterase (DUF676); pfam05057"
                     /db_xref="CDD:309968"
     CDS             1..803
                     /gene="LOC107922071"
                     /coded_by="XM_041086573.1:449..2860"
                     /db_xref="GeneID:107922071"
ORIGIN      
        1 mlrriawlig fnnkveqakk lsdakpqpak vqpavmldti qeiaiyihrf hnldlfqqgw
       61 yrlkitmrwe ndqqtsigap srvmqyeapn vgsddvygvw riddtdnsfa trpfrikyak
      121 qdvllsilva fhlplteneg plssavilkf elfyspvlek gsefqpssdg cpaavhefri
      181 ppkallglhs ycpvyfdsfh avlvdvsvhv cllkvgsrkg akkvpsvpys apnavageti
      241 dgssqaldkv actdlkhakl vkalfdardt llvelqrign gidqvidlte ftstmnetkl
      301 sdsilqanpv tahaevsgqg kpqnglegvg grlevrllqn lskddkiklf nlwgeqvsyl
      361 wntflnfhre nktqivqflr dawskdrrae wsiwmvyskv emphhyingg fdepshhivh
      421 krgpsllklt depaelatmr aelhrrsiaq mrinnrsiqd mqifgdpsgv pivimervin
      481 aprrtvsdis flknfdvmhl attstvleag ksqsstsaaq sgqdlkivvf vhgfqghhld
      541 lrlvrnqwll idskihflms eaneektsgd frdmglrlah eviayvkkkm dkasrsgdlr
      601 niklsfvghs igniiiraal aestmepylr flhtyvslsg phlgylyssn slfksglwll
      661 kklkgtqcih qltftddpdi rntffyklck qktlenfkni vllsspqdgy vpyhsaries
      721 craastdysk kgkaflemln ycidqirapt cenrvfircd vnfdtstygk nlntligraa
      781 hieflesdif arfimwsfpe lfk
//
LOCUS       XP_040942508             803 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAM135B [Gossypium hirsutum].
ACCESSION   XP_040942508
VERSION     XP_040942508.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086574.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..803
                     /product="protein FAM135B"
                     /calculated_mol_wt=90874
     Region          148..212
                     /region_name="DUF3657"
                     /note="Protein FAM135; pfam12394"
                     /db_xref="CDD:463558"
     Region          525..722
                     /region_name="DUF676"
                     /note="Putative serine esterase (DUF676); pfam05057"
                     /db_xref="CDD:309968"
     CDS             1..803
                     /gene="LOC107922071"
                     /coded_by="XM_041086574.1:365..2776"
                     /db_xref="GeneID:107922071"
ORIGIN      
        1 mlrriawlig fnnkveqakk lsdakpqpak vqpavmldti qeiaiyihrf hnldlfqqgw
       61 yrlkitmrwe ndqqtsigap srvmqyeapn vgsddvygvw riddtdnsfa trpfrikyak
      121 qdvllsilva fhlplteneg plssavilkf elfyspvlek gsefqpssdg cpaavhefri
      181 ppkallglhs ycpvyfdsfh avlvdvsvhv cllkvgsrkg akkvpsvpys apnavageti
      241 dgssqaldkv actdlkhakl vkalfdardt llvelqrign gidqvidlte ftstmnetkl
      301 sdsilqanpv tahaevsgqg kpqnglegvg grlevrllqn lskddkiklf nlwgeqvsyl
      361 wntflnfhre nktqivqflr dawskdrrae wsiwmvyskv emphhyingg fdepshhivh
      421 krgpsllklt depaelatmr aelhrrsiaq mrinnrsiqd mqifgdpsgv pivimervin
      481 aprrtvsdis flknfdvmhl attstvleag ksqsstsaaq sgqdlkivvf vhgfqghhld
      541 lrlvrnqwll idskihflms eaneektsgd frdmglrlah eviayvkkkm dkasrsgdlr
      601 niklsfvghs igniiiraal aestmepylr flhtyvslsg phlgylyssn slfksglwll
      661 kklkgtqcih qltftddpdi rntffyklck qktlenfkni vllsspqdgy vpyhsaries
      721 craastdysk kgkaflemln ycidqirapt cenrvfircd vnfdtstygk nlntligraa
      781 hieflesdif arfimwsfpe lfk
//
LOCUS       XP_016707395             803 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAM135B [Gossypium hirsutum].
ACCESSION   XP_016707395
VERSION     XP_016707395.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851906.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707395.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..803
                     /product="protein FAM135B"
                     /calculated_mol_wt=90874
     Region          148..212
                     /region_name="DUF3657"
                     /note="Protein FAM135; pfam12394"
                     /db_xref="CDD:463558"
     Region          525..722
                     /region_name="DUF676"
                     /note="Putative serine esterase (DUF676); pfam05057"
                     /db_xref="CDD:309968"
     CDS             1..803
                     /gene="LOC107922071"
                     /coded_by="XM_016851906.2:321..2732"
                     /db_xref="GeneID:107922071"
ORIGIN      
        1 mlrriawlig fnnkveqakk lsdakpqpak vqpavmldti qeiaiyihrf hnldlfqqgw
       61 yrlkitmrwe ndqqtsigap srvmqyeapn vgsddvygvw riddtdnsfa trpfrikyak
      121 qdvllsilva fhlplteneg plssavilkf elfyspvlek gsefqpssdg cpaavhefri
      181 ppkallglhs ycpvyfdsfh avlvdvsvhv cllkvgsrkg akkvpsvpys apnavageti
      241 dgssqaldkv actdlkhakl vkalfdardt llvelqrign gidqvidlte ftstmnetkl
      301 sdsilqanpv tahaevsgqg kpqnglegvg grlevrllqn lskddkiklf nlwgeqvsyl
      361 wntflnfhre nktqivqflr dawskdrrae wsiwmvyskv emphhyingg fdepshhivh
      421 krgpsllklt depaelatmr aelhrrsiaq mrinnrsiqd mqifgdpsgv pivimervin
      481 aprrtvsdis flknfdvmhl attstvleag ksqsstsaaq sgqdlkivvf vhgfqghhld
      541 lrlvrnqwll idskihflms eaneektsgd frdmglrlah eviayvkkkm dkasrsgdlr
      601 niklsfvghs igniiiraal aestmepylr flhtyvslsg phlgylyssn slfksglwll
      661 kklkgtqcih qltftddpdi rntffyklck qktlenfkni vllsspqdgy vpyhsaries
      721 craastdysk kgkaflemln ycidqirapt cenrvfircd vnfdtstygk nlntligraa
      781 hieflesdif arfimwsfpe lfk
//
LOCUS       XP_016707394             803 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAM135B [Gossypium hirsutum].
ACCESSION   XP_016707394
VERSION     XP_016707394.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707394.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..803
                     /product="protein FAM135B"
                     /calculated_mol_wt=90874
     Region          148..212
                     /region_name="DUF3657"
                     /note="Protein FAM135; pfam12394"
                     /db_xref="CDD:463558"
     Region          525..722
                     /region_name="DUF676"
                     /note="Putative serine esterase (DUF676); pfam05057"
                     /db_xref="CDD:309968"
     CDS             1..803
                     /gene="LOC107922071"
                     /coded_by="XM_016851905.2:317..2728"
                     /db_xref="GeneID:107922071"
ORIGIN      
        1 mlrriawlig fnnkveqakk lsdakpqpak vqpavmldti qeiaiyihrf hnldlfqqgw
       61 yrlkitmrwe ndqqtsigap srvmqyeapn vgsddvygvw riddtdnsfa trpfrikyak
      121 qdvllsilva fhlplteneg plssavilkf elfyspvlek gsefqpssdg cpaavhefri
      181 ppkallglhs ycpvyfdsfh avlvdvsvhv cllkvgsrkg akkvpsvpys apnavageti
      241 dgssqaldkv actdlkhakl vkalfdardt llvelqrign gidqvidlte ftstmnetkl
      301 sdsilqanpv tahaevsgqg kpqnglegvg grlevrllqn lskddkiklf nlwgeqvsyl
      361 wntflnfhre nktqivqflr dawskdrrae wsiwmvyskv emphhyingg fdepshhivh
      421 krgpsllklt depaelatmr aelhrrsiaq mrinnrsiqd mqifgdpsgv pivimervin
      481 aprrtvsdis flknfdvmhl attstvleag ksqsstsaaq sgqdlkivvf vhgfqghhld
      541 lrlvrnqwll idskihflms eaneektsgd frdmglrlah eviayvkkkm dkasrsgdlr
      601 niklsfvghs igniiiraal aestmepylr flhtyvslsg phlgylyssn slfksglwll
      661 kklkgtqcih qltftddpdi rntffyklck qktlenfkni vllsspqdgy vpyhsaries
      721 craastdysk kgkaflemln ycidqirapt cenrvfircd vnfdtstygk nlntligraa
      781 hieflesdif arfimwsfpe lfk
//
LOCUS       XP_016707393             803 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAM135B [Gossypium hirsutum].
ACCESSION   XP_016707393
VERSION     XP_016707393.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851904.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707393.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..803
                     /product="protein FAM135B"
                     /calculated_mol_wt=90874
     Region          148..212
                     /region_name="DUF3657"
                     /note="Protein FAM135; pfam12394"
                     /db_xref="CDD:463558"
     Region          525..722
                     /region_name="DUF676"
                     /note="Putative serine esterase (DUF676); pfam05057"
                     /db_xref="CDD:309968"
     CDS             1..803
                     /gene="LOC107922071"
                     /coded_by="XM_016851904.2:369..2780"
                     /db_xref="GeneID:107922071"
ORIGIN      
        1 mlrriawlig fnnkveqakk lsdakpqpak vqpavmldti qeiaiyihrf hnldlfqqgw
       61 yrlkitmrwe ndqqtsigap srvmqyeapn vgsddvygvw riddtdnsfa trpfrikyak
      121 qdvllsilva fhlplteneg plssavilkf elfyspvlek gsefqpssdg cpaavhefri
      181 ppkallglhs ycpvyfdsfh avlvdvsvhv cllkvgsrkg akkvpsvpys apnavageti
      241 dgssqaldkv actdlkhakl vkalfdardt llvelqrign gidqvidlte ftstmnetkl
      301 sdsilqanpv tahaevsgqg kpqnglegvg grlevrllqn lskddkiklf nlwgeqvsyl
      361 wntflnfhre nktqivqflr dawskdrrae wsiwmvyskv emphhyingg fdepshhivh
      421 krgpsllklt depaelatmr aelhrrsiaq mrinnrsiqd mqifgdpsgv pivimervin
      481 aprrtvsdis flknfdvmhl attstvleag ksqsstsaaq sgqdlkivvf vhgfqghhld
      541 lrlvrnqwll idskihflms eaneektsgd frdmglrlah eviayvkkkm dkasrsgdlr
      601 niklsfvghs igniiiraal aestmepylr flhtyvslsg phlgylyssn slfksglwll
      661 kklkgtqcih qltftddpdi rntffyklck qktlenfkni vllsspqdgy vpyhsaries
      721 craastdysk kgkaflemln ycidqirapt cenrvfircd vnfdtstygk nlntligraa
      781 hieflesdif arfimwsfpe lfk
//
LOCUS       XP_016708186             385 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,4-xylosyltransferase IRX9H [Gossypium hirsutum].
ACCESSION   XP_016708186
VERSION     XP_016708186.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852697.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..385
                     /product="probable beta-1,4-xylosyltransferase IRX9H"
                     /calculated_mol_wt=43815
     Region          134..363
                     /region_name="GlcAT-I"
                     /note="Beta1,3-glucuronyltransferase I (GlcAT-I) is
                     involved in the initial steps of proteoglycan synthesis;
                     cd00218"
                     /db_xref="CDD:132995"
     Site            order(141,229..232,266,282,288,293,330,358)
                     /site_type="active"
                     /db_xref="CDD:132995"
     Site            order(144..145,147..149,151..152,155..156,158..159,233,
                     235..237,255,264..265,279,281,354,357,359,361..362)
                     /site_type="active"
                     /note="putative dimerization interface [active]"
                     /db_xref="CDD:132995"
     Site            229..231
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:132995"
     CDS             1..385
                     /gene="LOC107922593"
                     /coded_by="XM_016852697.2:252..1409"
                     /db_xref="GeneID:107922593"
ORIGIN      
        1 mpsirrtlsp afhgrstqng aagfssspsn kllhkhfpss asstllnlvy rrgwrrsfcr
       61 clfffligll fgitpfgqmd tdirpkdfas pdlrpphvhl qsddpifsyv algvntqleq
      121 hnevtdsiep lkqlivvtpt hnrgfqvyfl nrlgqvlrlv kpplvwivve ektvsletaq
      181 ilrktgvmyr hvvstrnssd vkdrgvhqrn aalehierhk ldgivffadd dnvytlelfe
      241 slrttsrfgt wpvamleqsk nkaivegpvc nasrvigwht nekskrlrrf hvdmsgfafs
      301 stilwdpkrw grpcsnpirq ldtvkegfqe ttfieqvved esqmegippg cskvmnwhlh
      361 ldtgnvvypk gwlleknlev ilsik
//
LOCUS       XP_016707466            1336 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707466
VERSION     XP_016707466.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851977.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707466.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1336
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=145639
     Region          97..311
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          1097..1276
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1336
                     /gene="LOC107922126"
                     /coded_by="XM_016851977.2:199..4209"
                     /db_xref="GeneID:107922126"
ORIGIN      
        1 mnvagsrdqa lslltaalnh sdlavklssl kqakdiissl dsssaaelfp ylsdlqrsph
       61 slvrgflvei iediglksie hstvlvpvlv tflrdvdsnv vkqaivsgin ffcsvleelt
      121 lqfqqhgkvd qwlqelwmwm vrfkegvfsi alqpgpvgik llalkflemq vllftsdnvn
      181 sekyieatrg srrtfniswl sgghpildpv avtsdanrtl yilldmlqsa sslpgsvtit
      241 ivnclaaiar rrplhygtvl salldfnpnf dtvrechkas iqyslrtafl gflrctnpai
      301 vesrdrllra lramnagdaa dqvirqvekm iknserasre iqsvrddqas sqayvlgdvt
      361 kkrsmpqdne epthnfemas krirsgpnsh smpptqinns gqdfssvngg spsfplsddn
      421 ltpveqmiam igallaeger gaesleilis kihpdlladi vitnmrhlpk sppltkvgtl
      481 ptiqqavhvn sraqvlpppa stnslhtpvs tpqlpftsaa tisssisdta avnnfaadsk
      541 rdprrdprrl dprraavsvg mscspvlegt gaavpdfdcs isnkplsvpa venpslrpms
      601 niqsndntme gpsitsveqp apegdvvgga edivhilevk tssnhavspy vvdvdstemk
      661 adaeikhete essfpesdqn fqasitvssl detgqdlpmp plyvelteel ersviksavq
      721 qiaesylhlh wsdcnemrma llarlvgqid adddivvmlg kqivvdyrqq kghdivlqvl
      781 yhlysltvsd svdnssysav lyekfllavs kslldtlpas dksfsrllge vpflpdsalk
      841 llddlcssdv fdvtgkevrd aervtqglgv vwslilgrpn nrqaclgial kcavhsqddi
      901 rgkairlvan klyqlsyisr eieqfatnml lsavdqrtag aeslksgsid ergdkvvgsg
      961 dtstssslls elrtsgidss ntestsnsas vvsfpeaqrl islffalctk kpsllqlsfd
     1021 iyggapkivk qafhrhipiv iralgqsdsq llqiisdppp gsenlltlvl qiltqettps
     1081 pdlvatvkhl yetklkdati lipmlcslsk nevlpifprl vdlplekfql alahvlqgsa
     1141 htgpaltpae vlvaihdivp dkggpplkki tdacsacfeq rtvftqqvla kalnqmvdqi
     1201 plpllfmrtv iqaidafptl vdfvmeilsk lvskqiwrmp klwvgflkcv vqtqphsfpv
     1261 llqlpppqle stlnkygslr sslaayasqp tikgslprat lavlglanes hmqqqqphms
     1321 nlhssdtssv qgatst
//
LOCUS       XP_016707467            1335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707467
VERSION     XP_016707467.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851978.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707467.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1335
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=145540
     Region          97..311
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          1096..1275
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1335
                     /gene="LOC107922126"
                     /coded_by="XM_016851978.2:149..4156"
                     /db_xref="GeneID:107922126"
ORIGIN      
        1 mnvagsrdqa lslltaalnh sdlavklssl kqakdiissl dsssaaelfp ylsdlqrsph
       61 slvrgflvei iediglksie hstvlvpvlv tflrdvdsnv vkqaivsgin ffcsvleelt
      121 lqfqqhgkvd qwlqelwmwm vrfkegvfsi alqpgpvgik llalkflemq vllftsdnvn
      181 sekyieatrg srrtfniswl sgghpildpv avtsdanrtl yilldmlqsa sslpgsvtit
      241 ivnclaaiar rrplhygtvl salldfnpnf dtvrechkas iqyslrtafl gflrctnpai
      301 vesrdrllra lramnagdaa dqvirqvekm iknserasre iqsvrddqas sqayvlgdvt
      361 kkrsmpqdne epthnfemas krirsgpnsh smpptqinns gqdfssvngg spsfplsddn
      421 ltpveqmiam igallaeger gaesleilis kihpdlladi vitnmrhlpk sppltkvgtl
      481 ptiqqavhvn sraqvlpppa stnslhtpvs tpqlpftsaa tisssisdta avnnfaadsk
      541 rdprrdprrl dprraavsvg mscspvlegt gaavpdfdcs isnkplsvpa venpslrpms
      601 niqsndntme gpsitsveqp apegdvvgga edivhilevk tssnhavspy vvdvdstemk
      661 adaeikhete essfpesdqn fqasitvssl detgqdlpmp plyvelteel ersviksavq
      721 qiaesylhlh wsdcnemrma llarlvgqid adddivvmlg kqivvdyrqq kghdivlqvl
      781 yhlysltvsd svdnssysav lyekfllavs kslldtlpas dksfsrllge vpflpdsalk
      841 llddlcssdv fdvtgkevrd aervtqglgv vwslilgrpn nrqaclgial kcavhsqddi
      901 rgkairlvan klyqlsyisr eieqfatnml lsavdqrtag aeslksgsid ergdkvgsgd
      961 tstsssllse lrtsgidssn testsnsasv vsfpeaqrli slffalctkk psllqlsfdi
     1021 yggapkivkq afhrhipivi ralgqsdsql lqiisdpppg senlltlvlq iltqettpsp
     1081 dlvatvkhly etklkdatil ipmlcslskn evlpifprlv dlplekfqla lahvlqgsah
     1141 tgpaltpaev lvaihdivpd kggpplkkit dacsacfeqr tvftqqvlak alnqmvdqip
     1201 lpllfmrtvi qaidafptlv dfvmeilskl vskqiwrmpk lwvgflkcvv qtqphsfpvl
     1261 lqlpppqles tlnkygslrs slaayasqpt ikgslpratl avlglanesh mqqqqphmsn
     1321 lhssdtssvq gatst
//
LOCUS       XP_040942509             551 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040942509
VERSION     XP_040942509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086575.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..551
                     /product="LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
                     chloroplastic"
                     /calculated_mol_wt=60130
     Region          42..537
                     /region_name="PLN00203"
                     /note="glutamyl-tRNA reductase"
                     /db_xref="CDD:215101"
     CDS             1..551
                     /gene="LOC107922393"
                     /coded_by="XM_041086575.1:378..2033"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107922393"
ORIGIN      
        1 maisstfsaa kldsllmnyc ssssasfsga yfqyqqqkkv fprpnhgnkg mvsrnggvrc
       61 eaaefnaalg pqkidlskas alsalqqlkt saadrytker snivviglsv htapvemrek
      121 laipeaempr aigelcglnh ieeaavlstc nrmeiyvval sqhrgvkevt ewmsktsgip
      181 vskiyehrfl lynkdatqhl fevsagldsl vlgegqilaq vrqvvkageg vlgfgrnisg
      241 lfkhaitvgk rvrtetniaa gavsvssaav elaxmklpes shttarmlvv gagkmgklvi
      301 khlvakgctk mvvvnrseek vaaireemkg veiiyrpftd mlacsaeadv iftstasetp
      361 lflkehvkdl ppvssevggl rlfidisvpr nvgscvtdve gaqvynvddl kevvaanked
      421 rlrkameaqa iiteelkqfe awrdsletvp tikklrayad rirlaelekc lskmgedipk
      481 ktrkavddls rgivnkllhg pmqhlrcdgn dgrtlneale nmnalnrmfg lesdlslveq
      541 kirakveqsq k
//
LOCUS       XP_016706981             298 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH93 [Gossypium hirsutum].
ACCESSION   XP_016706981
VERSION     XP_016706981.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851492.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706981.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..298
                     /product="transcription factor bHLH93"
                     /calculated_mol_wt=34218
     Region          132..197
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(138..139,141,146,163..164)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(144..145,148..149,151..152,156,164..165,168..169,
                     172,174..175,178..179)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     Region          224..287
                     /region_name="ACT_UUR-ACR-like"
                     /note="ACT domains of the bacterial signal-transducing
                     uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD;
                     cd04873"
                     /db_xref="CDD:153145"
     CDS             1..298
                     /gene="LOC107921665"
                     /coded_by="XM_016851492.2:175..1071"
                     /db_xref="GeneID:107921665"
ORIGIN      
        1 meineeglfe elldvrgenw dtnptemsgi fsngtwnfdd hkpsstflpl pfhqdytynf
       61 npiycpfvde fssqsntfdt psfplqqqhd dqesrflvhq lhkldvkatc ktepvqsphp
      121 dnpakklerq psknlmaerr rrkrlndrll mlrsivpkis kmdrtsilgd tidytnelle
      181 rikslqqeve agsnmdhifk gekpnemivr ntpkfeverr ngdtrieicc rgdpglllst
      241 vstmeasgle iqqcviscfn dfamhascse dleqttlmrc edikkalfrn agyggrcv
//
LOCUS       XP_016738607             526 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase lambda isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016738607
VERSION     XP_016738607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..526
                     /product="DNA polymerase lambda isoform X1"
                     /calculated_mol_wt=59763
     Region          21..>61
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          <47..95
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          209..495
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(296,298,300..305,308,329,343,373..374,377,379,
                     381..384,386,434,436,449,451,466..471,474,490)
                     /site_type="active"
                     /db_xref="CDD:143386"
     Site            order(296,298,300..305,308,329,373,377,383..384,386,434,
                     436,449,451,466..471,474)
                     /site_type="other"
                     /note="primer binding site [nucleotide binding]"
                     /db_xref="CDD:143386"
     Site            order(343,373..374,377,379,381..384,386,434,451,466..469,
                     471,474,490)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143386"
     Site            order(384,386,451)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..526
                     /gene="LOC107948535"
                     /coded_by="XM_016883118.2:301..1881"
                     /db_xref="GeneID:107948535"
ORIGIN      
        1 mapkrtkrks pspdpqgmfa gmtvfliedg vqslrlqiwk qklvqmgakv etqlsekvsh
       61 vfaissdalf hhvdddrlar fkghvllyqw leeslaagek vsedfyilkv dpegfdifdk
      121 slkaklanrn sssydehshc krikssheek kqtneekkgd ietnsvswas ntephfpssl
      181 tnspeisstq dkdvgmqmsf qysppdlnkg iteifgklvn iyralgddrr sfsyykaiav
      241 veklpfkves adqvkdlpgi gksmqdhiqe ivttgklskl eqfetdekvk titlfgevwg
      301 igpatalkly ekghrtlddl knedsltnaq viglkyfddi ktriprheaq emelvlqkva
      361 ediipgmvvv cggsyrrgka scgdldivit hpdgkshkgf lqnyvkrlke mkllredlif
      421 sthseegtds gvdtyfglct ypgrelrhri dfkayprdiy afgliawtgn dvlnrrlrll
      481 aeskgyrldd tgfkryrkse igdrrrclif wdfhglnlmk gickea
//
LOCUS       XP_016738608             520 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase lambda isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016738608
VERSION     XP_016738608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="DNA polymerase lambda isoform X2"
                     /calculated_mol_wt=58346
     Region          21..>61
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          <47..95
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          209..497
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(296,298,300..305,308,329,343,373..374,377,379,
                     381..384,386,434,436,449,451,466..471,474,490)
                     /site_type="active"
                     /db_xref="CDD:143386"
     Site            order(296,298,300..305,308,329,373,377,383..384,386,434,
                     436,449,451,466..471,474)
                     /site_type="other"
                     /note="primer binding site [nucleotide binding]"
                     /db_xref="CDD:143386"
     Site            order(343,373..374,377,379,381..384,386,434,451,466..469,
                     471,474,490)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143386"
     Site            order(384,386,451)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..520
                     /gene="LOC107948535"
                     /coded_by="XM_016883119.2:300..1862"
                     /db_xref="GeneID:107948535"
ORIGIN      
        1 mapkrtkrks pspdpqgmfa gmtvfliedg vqslrlqiwk qklvqmgakv etqlsekvsh
       61 vfaissdalf hhvdddrlar fkghvllyqw leeslaagek vsedfyilkv dpegfdifdk
      121 slkaklanrn sssydehshc krikssheek kqtneekkgd ietnsvswas ntephfpssl
      181 tnspeisstq dkdvgmqmsf qysppdlnkg iteifgklvn iyralgddrr sfsyykaiav
      241 veklpfkves adqvkdlpgi gksmqdhiqe ivttgklskl eqfetdekvk titlfgevwg
      301 igpatalkly ekghrtlddl knedsltnaq viglkyfddi ktriprheaq emelvlqkva
      361 ediipgmvvv cggsyrrgka scgdldivit hpdgkshkgf lqnyvkrlke mkllredlif
      421 sthseegtds gvdtyfglct ypgrelrhri dfkayprdiy afgliawtgn dvlnrrlrll
      481 aeskgyrldd tglfpathgs ggkrgsrgta slkleteggv
//
LOCUS       XP_016738609             518 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase lambda isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016738609
VERSION     XP_016738609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883120.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="DNA polymerase lambda isoform X3"
                     /calculated_mol_wt=58854
     Region          21..>61
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          <47..95
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          201..487
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(288,290,292..297,300,321,335,365..366,369,371,
                     373..376,378,426,428,441,443,458..463,466,482)
                     /site_type="active"
                     /db_xref="CDD:143386"
     Site            order(288,290,292..297,300,321,365,369,375..376,378,426,
                     428,441,443,458..463,466)
                     /site_type="other"
                     /note="primer binding site [nucleotide binding]"
                     /db_xref="CDD:143386"
     Site            order(335,365..366,369,371,373..376,378,426,443,458..461,
                     463,466,482)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143386"
     Site            order(376,378,443)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..518
                     /gene="LOC107948535"
                     /coded_by="XM_016883120.2:301..1857"
                     /db_xref="GeneID:107948535"
ORIGIN      
        1 mapkrtkrks pspdpqgmfa gmtvfliedg vqslrlqiwk qklvqmgakv etqlsekvsh
       61 vfaissdalf hhvdddrlar fkghvllyqw leeslaagek vsedfyilkv dpegfdifdk
      121 slkaklanrn sssydehshc krikssheek kqtneekkgd ietnsvswas ntephfpssl
      181 tnspeisstq dkdysppdln kgiteifgkl vniyralgdd rrsfsyykai avveklpfkv
      241 esadqvkdlp gigksmqdhi qeivttgkls kleqfetdek vktitlfgev wgigpatalk
      301 lyekghrtld dlknedsltn aqviglkyfd diktriprhe aqemelvlqk vaediipgmv
      361 vvcggsyrrg kascgdldiv ithpdgkshk gflqnyvkrl kemkllredl ifsthseegt
      421 dsgvdtyfgl ctypgrelrh ridfkayprd iyafgliawt gndvlnrrlr llaeskgyrl
      481 ddtgfkryrk seigdrrrcl ifwdfhglnl mkgickea
//
LOCUS       XP_016738610             478 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase lambda isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016738610
VERSION     XP_016738610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883121.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="DNA polymerase lambda isoform X4"
                     /calculated_mol_wt=53863
     Region          21..>61
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          <47..95
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          209..476
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(296,298,300..305,308,329,343,373..374,377,379,
                     381..384,386,434,436,449,451,466..471,474)
                     /site_type="active"
                     /db_xref="CDD:143386"
     Site            order(296,298,300..305,308,329,373,377,383..384,386,434,
                     436,449,451,466..471,474)
                     /site_type="other"
                     /note="primer binding site [nucleotide binding]"
                     /db_xref="CDD:143386"
     Site            order(343,373..374,377,379,381..384,386,434,451,466..469,
                     471,474)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143386"
     Site            order(384,386,451)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..478
                     /gene="LOC107948535"
                     /coded_by="XM_016883121.2:301..1737"
                     /db_xref="GeneID:107948535"
ORIGIN      
        1 mapkrtkrks pspdpqgmfa gmtvfliedg vqslrlqiwk qklvqmgakv etqlsekvsh
       61 vfaissdalf hhvdddrlar fkghvllyqw leeslaagek vsedfyilkv dpegfdifdk
      121 slkaklanrn sssydehshc krikssheek kqtneekkgd ietnsvswas ntephfpssl
      181 tnspeisstq dkdvgmqmsf qysppdlnkg iteifgklvn iyralgddrr sfsyykaiav
      241 veklpfkves adqvkdlpgi gksmqdhiqe ivttgklskl eqfetdekvk titlfgevwg
      301 igpatalkly ekghrtlddl knedsltnaq viglkyfddi ktriprheaq emelvlqkva
      361 ediipgmvvv cggsyrrgka scgdldivit hpdgkshkgf lqnyvkrlke mkllredlif
      421 sthseegtds gvdtyfglct ypgrelrhri dfkayprdiy afgliawtgn dvlnrsag
//
LOCUS       XP_016738611             478 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase lambda isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016738611
VERSION     XP_016738611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883122.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="DNA polymerase lambda isoform X5"
                     /calculated_mol_wt=54138
     Region          21..>61
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          <47..95
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          209..>452
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(384,386,451)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..478
                     /gene="LOC107948535"
                     /coded_by="XM_016883122.2:301..1737"
                     /db_xref="GeneID:107948535"
ORIGIN      
        1 mapkrtkrks pspdpqgmfa gmtvfliedg vqslrlqiwk qklvqmgakv etqlsekvsh
       61 vfaissdalf hhvdddrlar fkghvllyqw leeslaagek vsedfyilkv dpegfdifdk
      121 slkaklanrn sssydehshc krikssheek kqtneekkgd ietnsvswas ntephfpssl
      181 tnspeisstq dkdvgmqmsf qysppdlnkg iteifgklvn iyralgddrr sfsyykaiav
      241 veklpfkves adqvkdlpgi gksmqdhiqe ivttgklskl eqfetdekvk titlfgevwg
      301 igpatalkly ekghrtlddl knedsltnaq viglkyfddi ktriprheaq emelvlqkva
      361 ediipgmvvv cggsyrrgka scgdldivit hpdgkshkgf lqnyvkrlke mkllredlif
      421 sthseegtds gvdtyfglct ypgrelrhri dfkynsvicl yaifllcrhi rgtymhld
//
LOCUS       XP_040942510             425 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase lambda isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040942510
VERSION     XP_040942510.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086576.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="DNA polymerase lambda isoform X6"
                     /calculated_mol_wt=47576
     Region          21..>61
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          <47..95
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     Region          209..>401
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     CDS             1..425
                     /gene="LOC107948535"
                     /coded_by="XM_041086576.1:301..1578"
                     /db_xref="GeneID:107948535"
ORIGIN      
        1 mapkrtkrks pspdpqgmfa gmtvfliedg vqslrlqiwk qklvqmgakv etqlsekvsh
       61 vfaissdalf hhvdddrlar fkghvllyqw leeslaagek vsedfyilkv dpegfdifdk
      121 slkaklanrn sssydehshc krikssheek kqtneekkgd ietnsvswas ntephfpssl
      181 tnspeisstq dkdvgmqmsf qysppdlnkg iteifgklvn iyralgddrr sfsyykaiav
      241 veklpfkves adqvkdlpgi gksmqdhiqe ivttgklskl eqfetdekvk titlfgevwg
      301 igpatalkly ekghrtlddl knedsltnaq viglkyfddi ktriprheaq emelvlqkva
      361 ediipgmvvv cggsyrrgka scgdldivit hpdgkrsgrl hvnklssglg kiiiillrsg
      421 mafyv
//
LOCUS       XP_016738614             331 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At5g40240 [Gossypium hirsutum].
ACCESSION   XP_016738614
VERSION     XP_016738614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..331
                     /product="WAT1-related protein At5g40240"
                     /calculated_mol_wt=36332
     Region          22..313
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..331
                     /gene="LOC107948539"
                     /coded_by="XM_016883125.2:37..1032"
                     /db_xref="GeneID:107948539"
ORIGIN      
        1 mhlfdrekgs akmgnlvpfm gmvmvilaqv ssmvitkaam ssgvdkyvli vysnalssli
       61 llpcsfvfhr svhlpwnssn lcilifllsl igcigqlcgy agieysspam atamlnlvpa
      121 ftfilaivcr mekhewrsts sqakvlgtti siagafvvtf ykgptilrlp hqllsspqin
      181 wvlgglllav eafinsawyv iqtmvlkkfp avltvmfylc ffnailsaiy slflvkdlsa
      241 wklrpniglv ailysaivat tfrislcswc lwkvgplyvs mfkplaiifa avmgivflgd
      301 dlslgkviga iiieriadtc gerklrnmfl l
//
LOCUS       XP_016738615             877 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-1 complex subunit gamma-2 [Gossypium hirsutum].
ACCESSION   XP_016738615
VERSION     XP_016738615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883126.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..877
                     /product="AP-1 complex subunit gamma-2"
                     /calculated_mol_wt=95878
     Region          26..580
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          764..874
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..877
                     /gene="LOC107948540"
                     /coded_by="XM_016883126.2:341..2974"
                     /db_xref="GeneID:107948540"
ORIGIN      
        1 mnpfssgtrl rdmirairsc ktaaeeravv rkecaairaa isendqdyrh rnlaklmfih
       61 mlgypthfgq meclkliass gfpekrigyl glmlllderq evlmlvtnsl kqdlnhsnqy
      121 iiglalcalg nicsaemard lapeverllq frdpnirkka alcsiriikk vpdlaenfin
      181 paasllrekh hgvlitgvql ctdlckvsse aleyfrekct eglvktlkdm anspyapeyd
      241 iagitdpflh irllkllril gqgdadasdc mndilaqvat kiesnknagn ailyecvgti
      301 msiedngglr vlainilgrf lsnrdnniry valnmlmkai tvdaqavqrh ratilecvkd
      361 sdasirkkal dlvyllvnes nvkpltkeli esleasdqef kgvltakics lvekfspeki
      421 wyidqmlkvl seagnfvkde vwhalivvis nasdlhgysv ralyrafqts teqetlvrva
      481 vwcigeygdm lvnnvgmldi eepitvtesd avdalevsik rlnsdlttka maliallkls
      541 srfpscseri kdiilqnkrs fvlelqqrsi efncilqkhq nirsalverm pvldeatfsg
      601 rragslptsv ststgtarnl pngiakpaaa pvadlldlss ddapapnssg gdflqdllgv
      661 dlspasappg tsqppkagtd vlldllsigt sppaqssssa snilssiqdd ktslvnlngl
      721 asltslspna tsaspapmmd lldgfgpspq kkeengpayp slvayesstl rmtfniskqp
      781 gnpqttliqa iftnlspnvy ndflfqaavp kflqlhldpa ssntlpasgn gsiiqsmkvt
      841 nsqhgkkslv mririaykin skdvleegqv snfprdl
//
LOCUS       XP_040942511             289 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942511
VERSION     XP_040942511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086577.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..289
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33775
     CDS             1..289
                     /gene="LOC107948541"
                     /coded_by="XM_041086577.1:408..1277"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 misldcplgd yreeeinefa swlggsyatd vtkpldgvlt iplangdnmn lhmskkvhre
       61 fasklfalyr nirkamerhe dlsqtlrrpa elimgsfdgi khdtdgfdkq gmrlllatln
      121 rifdslqtty egfqtstvka iyifdlsaqg khflpvfmnf rlwssilfkr nvltrmlsif
      181 plyltcnpnl ylcericsfl fcrkvhtyks wlqvvmkktm mkfrfltfpe aqlplryvpn
      241 liknelisff fylctlhnks mtllvkcecw lhvrvqttdm ielwlpilt
//
LOCUS       XP_040942513             285 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942513
VERSION     XP_040942513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086579.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=33310
     CDS             1..285
                     /gene="LOC107948541"
                     /coded_by="XM_041086579.1:380..1237"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 misldcplgd yreeeinefa swlggsyatd vtkpldgvlt iplangfdcl qkvhrefask
       61 lfalyrnirk amerhedlsq tlrrpaelim gsfdgikhdt dgfdkqgmrl llatlnrifd
      121 slqttyegfq tstvkaiyif dlsaqgkhfl pvfmnfrlws silfkrnvlt rmlsifplyl
      181 tcnpnlylce ricsflfcrk vhtykswlqv vmkktmmkfr fltfpeaqlp lryvpnlikn
      241 elisfffylc tlhnksmtll vkcecwlhvr vqttdmielw lpilt
//
LOCUS       XP_040942514             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942514
VERSION     XP_040942514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086580.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=27880
     CDS             1..235
                     /gene="LOC107948541"
                     /coded_by="XM_041086580.1:139..846"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 mkvhrefask lfalyrnirk amerhedlsq tlrrpaelim gsfdgikhdt dgfdkqgmrl
       61 llatlnrifd slqttyegfq tstvkaiyif dlsaqgkhfl pvfmnfrlws silfkrnvlt
      121 rmlsifplyl tcnpnlylce ricsflfcrk vhtykswlqv vmkktmmkfr fltfpeaqlp
      181 lryvpnlikn elisfffylc tlhnksmtll vkcecwlhvr vqttdmielw lpilt
//
LOCUS       XP_040942515             214 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942515
VERSION     XP_040942515.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086581.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..214
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=25319
     CDS             1..214
                     /gene="LOC107948541"
                     /coded_by="XM_041086581.1:260..904"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 merhedlsqt lrrpaelimg sfdgikhdtd gfdkqgmrll latlnrifds lqttyegfqt
       61 stvkaiyifd lsaqgkhflp vfmnfrlwss ilfkrnvltr mlsifplylt cnpnlylcer
      121 icsflfcrkv htykswlqvv mkktmmkfrf ltfpeaqlpl ryvpnlikne lisfffylct
      181 lhnksmtllv kcecwlhvrv qttdmielwl pilt
//
LOCUS       XP_040942516             214 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942516
VERSION     XP_040942516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086582.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..214
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=25319
     CDS             1..214
                     /gene="LOC107948541"
                     /coded_by="XM_041086582.1:141..785"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 merhedlsqt lrrpaelimg sfdgikhdtd gfdkqgmrll latlnrifds lqttyegfqt
       61 stvkaiyifd lsaqgkhflp vfmnfrlwss ilfkrnvltr mlsifplylt cnpnlylcer
      121 icsflfcrkv htykswlqvv mkktmmkfrf ltfpeaqlpl ryvpnlikne lisfffylct
      181 lhnksmtllv kcecwlhvrv qttdmielwl pilt
//
LOCUS       XP_016738616             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016738616
VERSION     XP_016738616.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016738616.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=20658
     CDS             1..181
                     /gene="LOC107948541"
                     /coded_by="XM_016883127.2:373..918"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 misldcplgd yreeeinefa swlggsyatd vtkpldgvlt iplangdnmn lhmskkvhre
       61 fasklfalyr nirkamerhe dlsqtlrrpa elimgsfdgi khdtdgfdkq gmrlllatln
      121 rifdslqtty egfqtstvka iyifdlsaqe hvgakfavqi rsraqkffsk ahwfefitrf
      181 p
//
LOCUS       XP_016738617             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016738617
VERSION     XP_016738617.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016738617.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=18657
     CDS             1..166
                     /gene="LOC107948541"
                     /coded_by="XM_016883128.2:371..871"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 misldcplgd yreeeinefa swlggsyatd vtkpldgvlt iplangdnmn lhmskkvhre
       61 fasklfalyr nirkamerhe dlsqtlrrpa elimgsfdgi khdtdgfdkq gmrlllatln
      121 rifdslqtty egfqtstvka iyifdlsaqv sssvekcilt kvgckw
//
LOCUS       XP_016738618             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016738618
VERSION     XP_016738618.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883129.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016738618.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=16197
     CDS             1..142
                     /gene="LOC107948541"
                     /coded_by="XM_016883129.2:401..829"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 misldcplgd yreeeinefa swlggsyatd vtkpldgvlt iplangdnmn lhmskkvhre
       61 fasklfalyr nirkamerhe dlsqtlrrpa elimgsfdgi khdtdgfdkq gmrlllatln
      121 rifdslqtty eglflldfrl qr
//
LOCUS       XP_016738619             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016738619
VERSION     XP_016738619.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016738619.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=16197
     CDS             1..142
                     /gene="LOC107948541"
                     /coded_by="XM_016883130.2:372..800"
                     /db_xref="GeneID:107948541"
ORIGIN      
        1 misldcplgd yreeeinefa swlggsyatd vtkpldgvlt iplangdnmn lhmskkvhre
       61 fasklfalyr nirkamerhe dlsqtlrrpa elimgsfdgi khdtdgfdkq gmrlllatln
      121 rifdslqtty eglflldfrl qr
//
LOCUS       XP_016738621             779 aa            linear   PLN 06-AUG-2024
DEFINITION  potassium transporter 6 [Gossypium hirsutum].
ACCESSION   XP_016738621
VERSION     XP_016738621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883132.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..779
                     /product="potassium transporter 6"
                     /calculated_mol_wt=87319
     Region          1..779
                     /region_name="PLN00149"
                     /note="potassium transporter; Provisional"
                     /db_xref="CDD:177753"
     CDS             1..779
                     /gene="LOC107948542"
                     /coded_by="XM_016883132.2:402..2741"
                     /db_xref="GeneID:107948542"
ORIGIN      
        1 mdletgvyqn yakkeswrtv lilayqslgv vygdlstspl yvykstfeed iqhsetneei
       61 ygvlsfvfwt ltlvpllkyv fivlraddng eggtfalysl lcrharvnsl pncqladeel
      121 ieykkdsigl apqssfgsrl ksslekhrvl qrfllvlali gtcmvigdgi ltpaisvfsa
      181 vsglelsmsk ehhkyvevpv aciiliglfa lqhygthrvg flfapvvlvw llcisaigly
      241 niihwnphvy qalspyymyk ffrktqrggw mslggillci tgseamfadl ghfsqlsiki
      301 aftflvypsl ilaymgqaay lsqhhiiesd yrigfyvsvp eklrwpvlvi ailaavvgsq
      361 aiitgtfsii kqcsslgcfp rvkiihtssk ihgqiyipei nwllmvlcla vtvgfrdtrr
      421 mgnasglavi tvmlvttclm slvivlcwqk rvflaigfvf ffgtiealyf tasltkfleg
      481 awvpialafi fliimcvwhy gtlkkyefdv qnkvsinwll slgpslgivr vrgiglvhta
      541 lvsgipaifs hfvtnlpafh qvlvflciks vpvphvkpee rflvghigpr eyrlyrcivr
      601 ygyrdvhkdd mefekdlvcs iaefirsesv apgsvnedlv kdddkmtvvg tcsshtegvq
      661 mreddadnie aagpselkei wspppviklr krvrfivpks peidtgaree lqelmearea
      721 giayilghsy vkakqgssli kklvinygye flrrnsrlst yalsvphast levgmiyhv
//
LOCUS       XP_016715580             285 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation of fatty acids protein sre1 [Gossypium hirsutum].
ACCESSION   XP_016715580
VERSION     XP_016715580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860091.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="elongation of fatty acids protein sre1"
                     /calculated_mol_wt=32419
     Region          46..275
                     /region_name="ELO"
                     /note="GNS1/SUR4 family; pfam01151"
                     /db_xref="CDD:460083"
     CDS             1..285
                     /gene="LOC107928814"
                     /coded_by="XM_016860091.2:47..904"
                     /db_xref="GeneID:107928814"
ORIGIN      
        1 mevpffptlf scikdlvvqq alfstledwl vkhpkilqfs wengqtpass hrfltltvls
       61 yisftfvlsq lsrpslsrpl lksiaavhni flltlsfima lgclvsifsq vpnfntlvcf
      121 prdtspsgpl ffwayifyls kivefmdtll iilsgsmkrl sflhvyhhsm vvimcyicld
      181 saqssvpmvl vtncvvhvvm ytyyllctlg mhpkwkkmvt dfqlvqfwls ilimamlvfy
      241 hftasgcsgi lswcfnaafi vsllylfsdf haksystnak vfkgn
//
LOCUS       XP_040942518             421 aa            linear   PLN 06-AUG-2024
DEFINITION  pinin isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942518
VERSION     XP_040942518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086584.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="pinin isoform X1"
                     /calculated_mol_wt=48536
     Region          162..289
                     /region_name="Pinin_SDK_memA"
                     /note="pinin/SDK/memA/ protein conserved region;
                     pfam04696"
                     /db_xref="CDD:461396"
     CDS             1..421
                     /gene="LOC107928887"
                     /coded_by="XM_041086584.1:131..1396"
                     /db_xref="GeneID:107928887"
ORIGIN      
        1 mgstavekta eelqreidel hrqqreiter lrdprglrrg glsgigprnf aangsrqrgf
       61 lrhadridge dqppakrrls savvkvedge ivddevakda sdmavegsga vhesdrklst
      121 qqqsgwsrrd vnqtplkkda evpvaehvpr ilpkdedpsl inrnkrmlgq llgtlerfrk
      181 edkqlsgtea ymrrsnslqr aeqrareese klrqqereqi aekrrrdltl rarvaakaee
      241 kkfellflqw sehhkklsnf irtkteppvy ylptkplhed aaiyeqqkeq eylewktarr
      301 eelseyrkqi geeyvgnvek elerwqnark arkanndmnl qetmdkelds hrlehgpkkr
      361 kipggnnned eedvedinvg eddmmddvlg vddnngrrgd etakaepdnt spvpdnnvdq
      421 l
//
LOCUS       XP_040942519             336 aa            linear   PLN 06-AUG-2024
DEFINITION  pinin isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942519
VERSION     XP_040942519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086585.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="pinin isoform X2"
                     /calculated_mol_wt=38581
     Region          162..289
                     /region_name="Pinin_SDK_memA"
                     /note="pinin/SDK/memA/ protein conserved region;
                     pfam04696"
                     /db_xref="CDD:461396"
     CDS             1..336
                     /gene="LOC107928887"
                     /coded_by="XM_041086585.1:131..1141"
                     /db_xref="GeneID:107928887"
ORIGIN      
        1 mgstavekta eelqreidel hrqqreiter lrdprglrrg glsgigprnf aangsrqrgf
       61 lrhadridge dqppakrrls savvkvedge ivddevakda sdmavegsga vhesdrklst
      121 qqqsgwsrrd vnqtplkkda evpvaehvpr ilpkdedpsl inrnkrmlgq llgtlerfrk
      181 edkqlsgtea ymrrsnslqr aeqrareese klrqqereqi aekrrrdltl rarvaakaee
      241 kkfellflqw sehhkklsnf irtkteppvy ylptkplhed aaiyeqqkeq sgrdivyqhr
      301 atinalcfrk ssvqnqlsiw ngrqqggrnc lnignr
//
LOCUS       XP_016715769             414 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715769
VERSION     XP_016715769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..414
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45269
     Region          164..391
                     /region_name="Pat_like"
                     /note="Patatin-like phospholipase; cd07224"
                     /db_xref="CDD:132863"
     Site            order(170..171,173,200,316)
                     /site_type="active"
                     /db_xref="CDD:132863"
     Site            198..202
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132863"
     CDS             1..414
                     /gene="LOC107928966"
                     /coded_by="XM_016860280.2:113..1357"
                     /db_xref="GeneID:107928966"
ORIGIN      
        1 mknrneieea snhsfvcfip fsflplmaps issifishtf nsftsftncs knnknhttpp
       61 sqhknhqlfs sspgkvsfaa atgelflgia srfiksssny edsgstipvf srprkrinrs
      121 eagnndkdri glvmedeiep eviweqrvkd ieaekerrvv tspgfsfsaa gllfpyhlgv
      181 aqfliekgyi kettplagss agaiicavia sgasmdealk atkdladdcr lkgtafrlga
      241 vlrdildkfl pddihtrsng rvrvavtqil wrprgllvdq fdskedlina vitssfipgy
      301 laprpatmfr nrlcidgglt lfmpptsask tvrvcafpas qlglqgigis pdcnpenras
      361 grelfnwale paddeildrl fefgyldaav wgeqnpvkdi vadnsplvgn gsak
//
LOCUS       XP_016715650             376 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-100 [Gossypium hirsutum].
ACCESSION   XP_016715650
VERSION     XP_016715650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..376
                     /product="actin-100"
                     /calculated_mol_wt=41450
     Region          7..371
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..376
                     /gene="LOC107928884"
                     /coded_by="XM_016860161.2:247..1377"
                     /db_xref="GeneID:107928884"
ORIGIN      
        1 madediqplv cdngtgmvka gfagddapra vfpsivgrpr htgvmvgmgq kdayvgdeaq
       61 skrgiltlky piehgivsnw ddmekiwhht fynelrvape ehpvllteap lnpkanrekm
      121 tqimfetfdv pamyvaiqav lslyasgrtt givldsgdgv shtvpiyegy alphailrld
      181 lagrdltdsl mkiltergys ftttaereiv rdmkeklayv aldyeqelet aksssaieks
      241 yelpdgqvit igaerfrcpe vlfqpsligm eaagihetty nsimkcdvdi rkdlygnivl
      301 sggttmfpgi adrmskeita lapssmkikv vapperkysv wiggsilasl stfqqmwisk
      361 aeydesgpai vhrkcf
//
LOCUS       XP_016715652             245 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715652
VERSION     XP_016715652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..245
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26245
     Region          125..222
                     /region_name="LEA_2"
                     /note="Late embryogenesis abundant protein; pfam03168"
                     /db_xref="CDD:427176"
     CDS             1..245
                     /gene="LOC107928886"
                     /coded_by="XM_016860163.2:484..1221"
                     /db_xref="GeneID:107928886"
ORIGIN      
        1 mpphareirp tpngdhhrrh glsaapplay yprsssssas fkgcccclfl lssfllllvl
       61 avfliiflav kperpqfdlq qvgvqymgis tsnpssldgt stavspsptt aslsltihll
      121 ftavnpnkvg ikygesrftv myrgiplgka svpgfyqeah strnveatia vdranlmqad
      181 aadlirdasl sdrvqlrvlg dvgakirvld fdspgvqvsv dcaivisprk qsitdkqcgf
      241 dglsv
//
LOCUS       XP_016715653             245 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715653
VERSION     XP_016715653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..245
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26245
     Region          125..222
                     /region_name="LEA_2"
                     /note="Late embryogenesis abundant protein; pfam03168"
                     /db_xref="CDD:427176"
     CDS             1..245
                     /gene="LOC107928886"
                     /coded_by="XM_016860164.2:484..1221"
                     /db_xref="GeneID:107928886"
ORIGIN      
        1 mpphareirp tpngdhhrrh glsaapplay yprsssssas fkgcccclfl lssfllllvl
       61 avfliiflav kperpqfdlq qvgvqymgis tsnpssldgt stavspsptt aslsltihll
      121 ftavnpnkvg ikygesrftv myrgiplgka svpgfyqeah strnveatia vdranlmqad
      181 aadlirdasl sdrvqlrvlg dvgakirvld fdspgvqvsv dcaivisprk qsitdkqcgf
      241 dglsv
//
LOCUS       XP_040942520             466 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942520
VERSION     XP_040942520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086586.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..466
                     /product="protein LAZ1 isoform X1"
                     /calculated_mol_wt=52909
     Region          16..297
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..466
                     /gene="LOC107928946"
                     /coded_by="XM_041086586.1:237..1637"
                     /db_xref="GeneID:107928946"
ORIGIN      
        1 mkitdyllgy sppiwatlia gvfvvvtlsl smylvlehly syknpeeqkf ligvilmvpl
       61 yavesfislv dqsisvdfsi lrdcyesfam ycferylvac lggedrtief mkrlgrassk
      121 tplleldyek gtikhpfpmn yilrpwklgq wfyqvvkfai vqymiikslt allavfleaf
      181 gvycegefkw gcgypymavv lnfsqswaly cliqfyavtk delarinpla kfltfksivf
      241 ltwwqgvaia lfyalglfrs piaeglqfks svqnfiicie mglasivhly vfpstpyelm
      301 gdpipesvpi lgdyasvdcp ldpemkagsg mtikesvkdv figggeyivn dvkftvnqav
      361 vpvekgitkf nkklhkisen ikrrrrhkrk trddscipta aqrvtrdidd pllegsmsds
      421 giarrkkrdr isgyssvesv geissgdqss rylirghrkv kvemky
//
LOCUS       XP_040942521             287 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942521
VERSION     XP_040942521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086587.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..287
                     /product="protein LAZ1 isoform X2"
                     /calculated_mol_wt=33070
     Region          16..280
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..287
                     /gene="LOC107928946"
                     /coded_by="XM_041086587.1:239..1102"
                     /db_xref="GeneID:107928946"
ORIGIN      
        1 mkitdyllgy sppiwatlia gvfvvvtlsl smylvlehly syknpeeqkf ligvilmvpl
       61 yavesfislv dqsisvdfsi lrdcyesfam ycferylvac lggedrtief mkrlgrassk
      121 tplleldyek gtikhpfpmn yilrpwklgq wfyqvvkfai vqymiikslt allavfleaf
      181 gvycegefkw gcgypymavv lnfsqswaly cliqfyavtk delarinpla kfltfksivf
      241 ltwwqgvaia lfyalglfrs piaeglqfks svqnfiicie yrwalll
//
LOCUS       XP_016715746              69 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b-c1 complex subunit 6-1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016715746
VERSION     XP_016715746.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860257.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..69
                     /product="cytochrome b-c1 complex subunit 6-1,
                     mitochondrial"
                     /calculated_mol_wt=7832
     Region          8..69
                     /region_name="UCR_hinge"
                     /note="Ubiquinol-cytochrome C reductase hinge protein;
                     pfam02320"
                     /db_xref="CDD:460531"
     CDS             1..69
                     /gene="LOC107928948"
                     /coded_by="XM_016860257.2:158..367"
                     /db_xref="GeneID:107928948"
ORIGIN      
        1 madeepvdqk kyledgckpk cvkqlrsyea cvkriqgdes ghkhctgqyf dywscvdkcv
       61 apslftklk
//
LOCUS       XP_016715747              69 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b-c1 complex subunit 6-1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016715747
VERSION     XP_016715747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860258.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..69
                     /product="cytochrome b-c1 complex subunit 6-1,
                     mitochondrial"
                     /calculated_mol_wt=7832
     Region          8..69
                     /region_name="UCR_hinge"
                     /note="Ubiquinol-cytochrome C reductase hinge protein;
                     pfam02320"
                     /db_xref="CDD:460531"
     CDS             1..69
                     /gene="LOC107928948"
                     /coded_by="XM_016860258.2:141..350"
                     /db_xref="GeneID:107928948"
ORIGIN      
        1 madeepvdqk kyledgckpk cvkqlrsyea cvkriqgdes ghkhctgqyf dywscvdkcv
       61 apslftklk
//
LOCUS       XP_016715595             222 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5
            [Gossypium hirsutum].
ACCESSION   XP_016715595
VERSION     XP_016715595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG5"
                     /calculated_mol_wt=24125
     Region          14..194
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..222
                     /gene="LOC107928828"
                     /coded_by="XM_016860106.2:122..790"
                     /db_xref="GeneID:107928828"
ORIGIN      
        1 mdmkgevlks rfkrvcvfcg sstgkrkcyr daavelaqel varkldlvyg ggstglmglv
       61 sqavhhgggn vlgiiprtlm skeisgetig evravadmhq rkaemanhsd cfialpggyg
      121 tleellevit waqlgihdkp vgllnvdgyy nylltfidka vddgfikpsq rhifvsapns
      181 kelvqkleey vpvhgviaka sweaeqlaft attttlqtei tl
//
LOCUS       XP_016715550             552 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715550
VERSION     XP_016715550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..552
                     /product="serine/threonine-protein kinase STY46 isoform
                     X1"
                     /calculated_mol_wt=62092
     Region          164..231
                     /region_name="ACT_TyrKc"
                     /note="Uncharacterized, N-terminal ACT domain of an
                     Arabidopsis/Oryza predicted tyrosine kinase and other
                     related ACT domains; cd04928"
                     /db_xref="CDD:153200"
     Region          284..527
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(284..288,292,303,305,336,352..355,359,361,399,401,
                     403..404,406,417,420,435..438)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(284..288,292,303,305,336,352..355,359,399,401,
                     403..404,406,417)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(288,359,361,399,401,403,420,435..438)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(416..424,434..438)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..552
                     /gene="LOC107928793"
                     /coded_by="XM_016860061.2:222..1880"
                     /db_xref="GeneID:107928793"
ORIGIN      
        1 mvmedtescg skandtpplq sqkqrlkfdv yndvlrrlrr sdkeeadrpg fdhqlwthfd
       61 rlptryaldv nveraedvlm hqrllhlahd hatrlamevr lvqvqstsdg nspseesaqs
      121 srkssnrqsi hpppafgssp nlgsladqdg dnsehgnshf srpmheitfs tedkpkllsq
      181 ltallaeigl niqeahafst vdgysldvfv vdgwpyeete qlkdalekdl lkiekqswlk
      241 qlptsptkgq etrtkgdqny vaipndgsdv weidprhlkf enkvasgsyg dlykgtycsq
      301 dvaikvlkpe rvdtdiqkdf aqevfimrkv rhknvvqfig actkpptlci vtefmcggsv
      361 ydylhkqkgv fklpsllkva idvskgmnyl hqndiihrdl kaanllmden evvkvadfgv
      421 arvkvqsgvm taetgtyrwm apeviehkpy dhkadvfsfg imlwelltgk lpyeyltplq
      481 aavgvvqkgl rptvpkntnp kltqllercw qqdptlrpdf seiigilqqi sevgdegkss
      541 ggffsalrka ak
//
LOCUS       XP_040942523             525 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942523
VERSION     XP_040942523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086589.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..525
                     /product="serine/threonine-protein kinase STY46 isoform
                     X2"
                     /calculated_mol_wt=58935
     Region          164..231
                     /region_name="ACT_TyrKc"
                     /note="Uncharacterized, N-terminal ACT domain of an
                     Arabidopsis/Oryza predicted tyrosine kinase and other
                     related ACT domains; cd04928"
                     /db_xref="CDD:153200"
     Region          284..500
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(284..288,292,303,305,336,352..355,359,361,399,401,
                     403..404,406,417,420,435..438)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(284..288,292,303,305,336,352..355,359,399,401,
                     403..404,406,417)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(288,359,361,399,401,403,420,435..438)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(416..424,434..438)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..525
                     /gene="LOC107928793"
                     /coded_by="XM_041086589.1:167..1744"
                     /db_xref="GeneID:107928793"
ORIGIN      
        1 mvmedtescg skandtpplq sqkqrlkfdv yndvlrrlrr sdkeeadrpg fdhqlwthfd
       61 rlptryaldv nveraedvlm hqrllhlahd hatrlamevr lvqvqstsdg nspseesaqs
      121 srkssnrqsi hpppafgssp nlgsladqdg dnsehgnshf srpmheitfs tedkpkllsq
      181 ltallaeigl niqeahafst vdgysldvfv vdgwpyeete qlkdalekdl lkiekqswlk
      241 qlptsptkgq etrtkgdqny vaipndgsdv weidprhlkf enkvasgsyg dlykgtycsq
      301 dvaikvlkpe rvdtdiqkdf aqevfimrkv rhknvvqfig actkpptlci vtefmcggsv
      361 ydylhkqkgv fklpsllkva idvskgmnyl hqndiihrdl kaanllmden evvkvadfgv
      421 arvkvqsgvm taetgtyrwm apelpyeylt plqaavgvvq kglrptvpkn tnpkltqlle
      481 rcwqqdptlr pdfseiigil qqisevgdeg kssggffsal rkaak
//
LOCUS       XP_040942524             490 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040942524
VERSION     XP_040942524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086590.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="serine/threonine-protein kinase STY46 isoform
                     X3"
                     /calculated_mol_wt=55372
     Region          164..231
                     /region_name="ACT_TyrKc"
                     /note="Uncharacterized, N-terminal ACT domain of an
                     Arabidopsis/Oryza predicted tyrosine kinase and other
                     related ACT domains; cd04928"
                     /db_xref="CDD:153200"
     Region          284..482
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(284..288,292,303,305,336,352..355,359,361,399,401,
                     403..404,406,417,420,435..438)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(284..288,292,303,305,336,352..355,359,399,401,
                     403..404,406,417)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(288,359,361,399,401,403,420,435..438)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(416..424,434..438)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..490
                     /gene="LOC107928793"
                     /coded_by="XM_041086590.1:169..1641"
                     /db_xref="GeneID:107928793"
ORIGIN      
        1 mvmedtescg skandtpplq sqkqrlkfdv yndvlrrlrr sdkeeadrpg fdhqlwthfd
       61 rlptryaldv nveraedvlm hqrllhlahd hatrlamevr lvqvqstsdg nspseesaqs
      121 srkssnrqsi hpppafgssp nlgsladqdg dnsehgnshf srpmheitfs tedkpkllsq
      181 ltallaeigl niqeahafst vdgysldvfv vdgwpyeete qlkdalekdl lkiekqswlk
      241 qlptsptkgq etrtkgdqny vaipndgsdv weidprhlkf enkvasgsyg dlykgtycsq
      301 dvaikvlkpe rvdtdiqkdf aqevfimrkv rhknvvqfig actkpptlci vtefmcggsv
      361 ydylhkqkgv fklpsllkva idvskgmnyl hqndiihrdl kaanllmden evvkvadfgv
      421 arvkvqsgvm taetgtyrwm apeviehkpy dhkadvfsfg imlwelltgk vlldqlsfll
      481 iiclsfhmnt
//
LOCUS       XP_016715760             894 aa            linear   PLN 06-AUG-2024
DEFINITION  transportin-1 [Gossypium hirsutum].
ACCESSION   XP_016715760
VERSION     XP_016715760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..894
                     /product="transportin-1"
                     /calculated_mol_wt=99400
     Region          68..>503
                     /region_name="KAP95"
                     /note="Karyopherin (importin) beta [Intracellular
                     trafficking and secretion]; COG5215"
                     /db_xref="CDD:227540"
     Region          134..162
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(151..152,155,158..159,162,200..201,204,207..208,211,
                     241..242,245,248..249,282..283,286,289..290)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          182..212
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          223..249
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          262..290
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          388..423
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..465
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          481..503
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          669..694
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          681..737
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     Region          706..740
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          729..782
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     Region          755..781
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..894
                     /gene="LOC107928955"
                     /coded_by="XM_016860271.2:229..2913"
                     /db_xref="GeneID:107928955"
ORIGIN      
        1 maaagsaswq pqeeglkeic glleqqispy ssadksqiwq qlqhysqfpd fnnylvfila
       61 raegksgeir qaaglllknn lrtayklmsp ahqqyiksel lpclgaadkh irstvgtivt
      121 vvvqqggilg wpellqalvn cldssdlnhm egamdalski cedipqvlds dvpglaerpi
      181 kiflprlfqf fqsphtslrk lsldsvnqyi mlmpsalyts mdkflqglfv landpaaevr
      241 klvcaafvql ieihpsflep hlknvieyml qvskdtddev aleacefwsa ycdaqlpyes
      301 lreylprlip illsnmvyad ddeslvdaee deslpdrdqd lkpqfhtprf hgsddaeddd
      361 ddsygiwnlr kcsaaaldvl snvfgdeilp almpiieakl sasgdeawkd reaavltlga
      421 iaegcingly phlseivafl ipllddkfal irsiscwtls rfskyivqds gnkkgyeqfd
      481 svltgllrri ldinkrvqea acsafatlee eaaeelaprl evilqhlmca fgkyqrrnlr
      541 ivydaigtla davgeklnqp vyleilmppl iakwqqvsns dkdllrllec ftsiaqalgt
      601 gfsqfdqpvf qrciniiqtq qlakvdpisa gvqydkefiv csldllsglt eglqggiesl
      661 vaqsnlrdll lqccmdddsd vrqsafalvg dlakvcpvhl rprlsefldv atnqlttpkl
      721 netiavanna cwaigelaik vrqeispvvm tvisclvpil qhaeqgvnks vventaitlg
      781 rlawvcpdlv sphmehfmqp wcislsmird diekedafrg lcavvranps aalsslvlmc
      841 kaiaswdeir ngelhnevcq vlhgykqmlr ngawdqcmsa leppekdkls kyqv
//
LOCUS       XP_016715638             591 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 39 [Gossypium hirsutum].
ACCESSION   XP_016715638
VERSION     XP_016715638.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860149.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715638.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..591
                     /product="RNA-binding protein 39"
                     /calculated_mol_wt=66456
     Region          38..589
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..591
                     /gene="LOC107928875"
                     /coded_by="XM_016860149.2:158..1933"
                     /db_xref="GeneID:107928875"
ORIGIN      
        1 mdfdeyeyle ntvenpepqk akkengngsv dtvkseernr srsskhkrde radgsddyhh
       61 pskhsksiee ssrdhdqrke lgssqlsrsr dgekdrhrss rehrskdkdr edrngrerek
      121 erdrdrkerd reserdrere rerersrrsr srserepdks rdmefrerek ereprerdrg
      181 irrykdkked aaepevdper dqrtvfayqi slkaserdvy effsragkvr dvrlimdrns
      241 rrskgvgyie fydvmsvpma ialsgqpllg qpvmvkpsea eknlvqstts asagqtgpya
      301 aggrklyvgn lhfnitedql rqvfepfgsv elvqlpldet ghskgfgfvq farledakna
      361 lnlngqleig grvikvstvt dqgvsqdfgt nasaadlddd dggglslnss srallmakld
      421 rsgtassiag svgmpannst gltastapil gvapslpslv pptiptsist ipglpgglql
      481 ptngipvidt igspseclll knmfdptlet epefdldike dvqeecskfg klkhihvdrd
      541 sagfvylrfe daqgainaqr nlhgrwfagk mitatymvpq tyeakfpssn r
//
LOCUS       XP_016715641             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715641
VERSION     XP_016715641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860152.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14495
     Region          7..123
                     /region_name="FAM210A-B_dom"
                     /note="FAM210A/B-like domain; pfam06916"
                     /db_xref="CDD:429191"
     CDS             1..135
                     /gene="LOC107928878"
                     /coded_by="XM_016860152.2:266..673"
                     /db_xref="GeneID:107928878"
ORIGIN      
        1 mailsgsrfk efvkkygkva lgvhfsvsaa sitglyvaik nnvdveslfd kfhlpdfskg
       61 qnpppgltdp dgflidestv eetrrnrtae laastggala lavicnkalf pvrvpitial
      121 tpplarflar rrivk
//
LOCUS       XP_016715678             410 aa            linear   PLN 06-AUG-2024
DEFINITION  WD-40 repeat-containing protein MSI3 [Gossypium hirsutum].
ACCESSION   XP_016715678
VERSION     XP_016715678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860189.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..410
                     /product="WD-40 repeat-containing protein MSI3"
                     /calculated_mol_wt=46019
     Region          14..86
                     /region_name="CAF1C_H4-bd"
                     /note="Histone-binding protein RBBP4 or subunit C of CAF1
                     complex; pfam12265"
                     /db_xref="CDD:463513"
     Region          118..165
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <162..393
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          170..213
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          220..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          262..300
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..359
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          365..390
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..410
                     /gene="LOC107928902"
                     /coded_by="XM_016860189.2:154..1386"
                     /db_xref="GeneID:107928902"
ORIGIN      
        1 magdsemnpe qveeefsvwk kntpflydlv ishplewpsl tvhwvpsspt pygpdptfnv
       61 hklvlgthts ggapdflmia davlptlase sniaaknddp vipkveitqk mrvdgevnra
      121 rcmpqnpvii gaktsgsdvf vfdyakqaaa keqegdcvad lrlrghekeg yglswspfke
      181 gyllsgsqdh kiclwdlssw pqdkvldath vyeahesvve dvswhlknen ifgssgddcm
      241 lmiwdlrtnq tehrvkahdr einylsfnpy newvlatass dstvglfdvr kltvplhvls
      301 shsgevfqve wdpnhetvla ssgddrrlmi wdlnrigeeq leieldaddg ppellfshgg
      361 hkakisdfsw nknepwviss vaedntlqvw qlaesiyrde ddtqtaedhp
//
LOCUS       XP_016715679             269 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 23 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715679
VERSION     XP_016715679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="basic leucine zipper 23 isoform X1"
                     /calculated_mol_wt=28943
     Region          92..143
                     /region_name="bZIP_2"
                     /note="Basic region leucine zipper; pfam07716"
                     /db_xref="CDD:462244"
     CDS             1..269
                     /gene="LOC107928903"
                     /coded_by="XM_016860190.2:197..1006"
                     /db_xref="GeneID:107928903"
ORIGIN      
        1 mdegeldfsn hevfsggnsm gdipsscsmd sffneilnds hacththtcn ppgpdnshth
       61 tcfhvhtkiv pastedeaaa ddtegsrekk pkkrslgnre avrkyrqkvk araasledev
      121 vrlrtlnqql lkrlqgqaql eaeiarlkcl lvdvrgrieg eigsfpyqkp tannvntlnl
      181 pgaylmnpcn iqcndqmycl qpevegntge ataldghgfn gcefddiqcl asqntgakel
      241 pgggvgsaas ngnssgtkrr kgvrpatag
//
LOCUS       XP_016715681             265 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 23 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715681
VERSION     XP_016715681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="basic leucine zipper 23 isoform X2"
                     /calculated_mol_wt=28534
     Region          92..143
                     /region_name="bZIP_2"
                     /note="Basic region leucine zipper; pfam07716"
                     /db_xref="CDD:462244"
     CDS             1..265
                     /gene="LOC107928903"
                     /coded_by="XM_016860192.2:246..1043"
                     /db_xref="GeneID:107928903"
ORIGIN      
        1 mdegeldfsn hevfsggnsm gdipsscsmd sffneilnds hacththtcn ppgpdnshth
       61 tcfhvhtkiv pastedeaaa ddtegsrekk pkkrslgnre avrkyrqkvk araasledev
      121 vrlrtlnqql lkrlqgqaql eaeiarlkcl lvdvrgrieg eigsfpyqkp tannvntlnl
      181 pgaylmnpcn iqcndqmycl qpevegntge ataldghgfn gcefddiqcl asqntgakel
      241 pgggvgsaas ngnssgtkrr katag
//
LOCUS       XP_040942526             265 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 23 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942526
VERSION     XP_040942526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086592.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="basic leucine zipper 23 isoform X2"
                     /calculated_mol_wt=28534
     Region          92..143
                     /region_name="bZIP_2"
                     /note="Basic region leucine zipper; pfam07716"
                     /db_xref="CDD:462244"
     CDS             1..265
                     /gene="LOC107928903"
                     /coded_by="XM_041086592.1:263..1060"
                     /db_xref="GeneID:107928903"
ORIGIN      
        1 mdegeldfsn hevfsggnsm gdipsscsmd sffneilnds hacththtcn ppgpdnshth
       61 tcfhvhtkiv pastedeaaa ddtegsrekk pkkrslgnre avrkyrqkvk araasledev
      121 vrlrtlnqql lkrlqgqaql eaeiarlkcl lvdvrgrieg eigsfpyqkp tannvntlnl
      181 pgaylmnpcn iqcndqmycl qpevegntge ataldghgfn gcefddiqcl asqntgakel
      241 pgggvgsaas ngnssgtkrr katag
//
LOCUS       XP_016715682             217 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase BOI [Gossypium hirsutum].
ACCESSION   XP_016715682
VERSION     XP_016715682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..217
                     /product="E3 ubiquitin-protein ligase BOI"
                     /calculated_mol_wt=24382
     Region          168..206
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(170,173,185,187,191,194,201,204)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438173"
     CDS             1..217
                     /gene="LOC107928905"
                     /coded_by="XM_016860193.2:329..982"
                     /db_xref="GeneID:107928905"
ORIGIN      
        1 maiqeaqfys dnvcfggggg sgsgdngglg sgafnqfrfd hqqqqlqqrh eidqfiisqn
       61 erlrllleqq rnqqitmfln kiesralill nqkdeeiqka knklielqnl lkklemdnqg
      121 wkkvayekea mamclnnkle vlkdrasrcf ingvddaesc cedkdtrmvc kccnsrsscv
      181 lflpcrhlcs cknceallds cpvcktakka siealvs
//
LOCUS       XP_016715709            1889 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715709
VERSION     XP_016715709.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860220.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715709.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1889
                     /product="E3 ubiquitin-protein ligase UPL3 isoform X1"
                     /calculated_mol_wt=204443
     Region          <234..415
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Site            order(255,259,294,298,302,333,337,341)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          268..305
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          312..342
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          1478..1884
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(1484,1512,1522,1621,1814,1850..1851,1854..1858,1878)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(1649,1652..1653,1655..1656,1668,1678,1680,
                     1690..1691,1693,1699,1704,1719,1723)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1889
                     /gene="LOC107928922"
                     /coded_by="XM_016860220.2:252..5921"
                     /db_xref="GeneID:107928922"
ORIGIN      
        1 mefrtrkrae aftaapssss ssfdptvrsn krvrlssssa vatttgtrvs rasgflmdsv
       61 taesssgsrg gsgednrtvs eslnlvsdkg kekeedlris dretdrdsgd nnesnsnhle
      121 gssglnmets ggdeddhndn rgdvgslqqn ltsassalqg llrklgagid dflpsspmgs
      181 sssshqngrl krilsglsad geegrqveal ielceilsig teeslstfsv dlfvpvlvgm
      241 lnhesnpdim ilaaralthl cdvmpsscaa vvhygavssf caklltieyi dlaeqsllal
      301 kkisqehptp clragalmav lsyldffatg vqrvalstaa nmcrnlpsda adyvmdavpp
      361 ltnllqyhds kvlehasvcl triseafass pdkldelcsh glvtqaasli stsnsgsgqg
      421 slstptytgl irllstcasg spvgaktllm lgisgilkdi lvgsdisans avpptlsrpa
      481 eqifeivnla nellpplpqg aislpassni ffkgsivkes ptsssekedi tdgnasevsa
      541 rekllheqpd vlqqfgmdll pvliqiygss vntsirhkcl svigklmyfs saemiqnlls
      601 vtnlssflag ilaskdphvl vpslkvaeil leklpatfsk mfvregvvha vdqlvlignq
      661 nntpslasyv ekdndsvsgm ssrsrryrrr synsnpegts veesknpasl nigsppssve
      721 tpttnlrtvv sgcakafkdk yfpsepgave fgmteellhl knlcmklnag vddqktkakg
      781 kskdsgspla disaakeeyl igviseilae lskgdgvstf efigsavvaa llnyfscgyf
      841 skgiisdgnl pklrhqalkr fklfisvalp ssvddrsiap mvvlvqklqn alssvehfpv
      901 vfshasrssg gsarlsfgfs alsqpfklrl crahgekslr dysssivlid plaslatved
      961 flwqrvqrsd taqklsisvg naesgntssg aatsspsttt pasdtrrhfs rsrssvsigd
     1021 aatkepssqe nstrsskgkg kvvlemaqer lrgpqtrnaa crraalgkdd pmkpvtgvst
     1081 sedeesdtfp vevndvwgve dddisddeed rhedvlrdds fpvcmpdkvh dvklgdsaed
     1141 gkpasaisds qintasgsss raaavkcsds adfrsaygsk gamsfaaaaa maglgsvngr
     1201 rirggrgleg qhpfgssnep pkliftaggk qlkrhftiyq aiqgqlvlde deddercavs
     1261 dissegsrlw sdiytityqr adsqadrssv ggsgsttesn stksgssssn svpqthrmsl
     1321 ldsilqgelp cdlersnpty nilallrvle glnqlahrlr fqifsdnfae gkisnldeli
     1381 ltgsrvpsee fingkltpkl arqmqdalvl csgnlpswcy qltkscpflf pfetrrqyfy
     1441 stafglsral yrlqqqqsad ghgstnerev rvgrlqrqkv risrdrilds aakvmkmysv
     1501 qkavleveyf gevgtgsgpt lefytllshe lqkfelgmwr snstwnkslm eidgdekkeg
     1561 ktagsttidg vmiqaplglf prpwqlnada segsefskli eyfrlvgrvm akalqdgrll
     1621 dlplstsfyk lvlgeeldlh dipsfdsefg killelhliv cqkkylelmg ddsgdaiadl
     1681 rfrgapiefl cldftlpghp dyilkpgdet vdinnleeyi slvvdatvkt gimrqmeafr
     1741 agfnqvfdia slqiftpqel dyllcgrrel weaetladhi kfdhgytaks pviinlleim
     1801 gefapdqqra fcqfvtgapr lppgglavln pkltivrkhs spsesvdddl psvmtcanyl
     1861 klppystkei lykkllyais egqgsfdls
//
LOCUS       XP_040942528            1594 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942528
VERSION     XP_040942528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086594.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1594
                     /product="E3 ubiquitin-protein ligase UPL3 isoform X2"
                     /calculated_mol_wt=171271
     Region          <234..415
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Site            order(255,259,294,298,302,333,337,341)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          268..305
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          312..342
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <1391..>1531
                     /region_name="HUL4"
                     /note="Ubiquitin-protein ligase [Posttranslational
                     modification, protein turnover, chaperones]; COG5021"
                     /db_xref="CDD:227354"
     Region          1478..>1543
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cl27008"
                     /db_xref="CDD:474882"
     CDS             1..1594
                     /gene="LOC107928922"
                     /coded_by="XM_041086594.1:231..5015"
                     /db_xref="GeneID:107928922"
ORIGIN      
        1 mefrtrkrae aftaapssss ssfdptvrsn krvrlssssa vatttgtrvs rasgflmdsv
       61 taesssgsrg gsgednrtvs eslnlvsdkg kekeedlris dretdrdsgd nnesnsnhle
      121 gssglnmets ggdeddhndn rgdvgslqqn ltsassalqg llrklgagid dflpsspmgs
      181 sssshqngrl krilsglsad geegrqveal ielceilsig teeslstfsv dlfvpvlvgm
      241 lnhesnpdim ilaaralthl cdvmpsscaa vvhygavssf caklltieyi dlaeqsllal
      301 kkisqehptp clragalmav lsyldffatg vqrvalstaa nmcrnlpsda adyvmdavpp
      361 ltnllqyhds kvlehasvcl triseafass pdkldelcsh glvtqaasli stsnsgsgqg
      421 slstptytgl irllstcasg spvgaktllm lgisgilkdi lvgsdisans avpptlsrpa
      481 eqifeivnla nellpplpqg aislpassni ffkgsivkes ptsssekedi tdgnasevsa
      541 rekllheqpd vlqqfgmdll pvliqiygss vntsirhkcl svigklmyfs saemiqnlls
      601 vtnlssflag ilaskdphvl vpslkvaeil leklpatfsk mfvregvvha vdqlvlignq
      661 nntpslasyv ekdndsvsgm ssrsrryrrr synsnpegts veesknpasl nigsppssve
      721 tpttnlrtvv sgcakafkdk yfpsepgave fgmteellhl knlcmklnag vddqktkakg
      781 kskdsgspla disaakeeyl igviseilae lskgdgvstf efigsavvaa llnyfscgyf
      841 skgiisdgnl pklrhqalkr fklfisvalp ssvddrsiap mvvlvqklqn alssvehfpv
      901 vfshasrssg gsarlsfgfs alsqpfklrl crahgekslr dysssivlid plaslatved
      961 flwqrvqrsd taqklsisvg naesgntssg aatsspsttt pasdtrrhfs rsrssvsigd
     1021 aatkepssqe nstrsskgkg kvvlemaqer lrgpqtrnaa crraalgkdd pmkpvtgvst
     1081 sedeesdtfp vevndvwgve dddisddeed rhedvlrdds fpvcmpdkvh dvklgdsaed
     1141 gkpasaisds qintasgsss raaavkcsds adfrsaygsk gamsfaaaaa maglgsvngr
     1201 rirggrgleg qhpfgssnep pkliftaggk qlkrhftiyq aiqgqlvlde deddercavs
     1261 dissegsrlw sdiytityqr adsqadrssv ggsgsttesn stksgssssn svpqthrmsl
     1321 ldsilqgelp cdlersnpty nilallrvle glnqlahrlr fqifsdnfae gkisnldeli
     1381 ltgsrvpsee fingkltpkl arqmqdalvl csgnlpswcy qltkscpflf pfetrrqyfy
     1441 stafglsral yrlqqqqsad ghgstnerev rvgrlqrqkv risrdrilds aakvmkmysv
     1501 qkavleveyf gevgtgsgpt lefytllshe lqkfelgmwr snstwnkslm eidgdekkeg
     1561 ktagsttidg vmiqaplglf prpwqlnada sega
//
LOCUS       XP_016715588             540 aa            linear   PLN 06-AUG-2024
DEFINITION  synaptotagmin-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715588
VERSION     XP_016715588.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860099.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715588.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..540
                     /product="synaptotagmin-1 isoform X1"
                     /calculated_mol_wt=61954
     Region          2..>468
                     /region_name="COG5038"
                     /note="Ca2+-dependent lipid-binding protein, contains C2
                     domain [General function prediction only]"
                     /db_xref="CDD:227371"
     Region          60..248
                     /region_name="SMP_SYT"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain found in the synaptotagmin family,
                     mostly plants; cd21677"
                     /db_xref="CDD:439233"
     Site            order(85,88..89,93,97,120,125,146,152,154,156,172,174,178,
                     180,195,197,199,209,234,237..238,241,243..246)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:439233"
     Region          419..522
                     /region_name="C2"
                     /note="C2 domain; pfam00168"
                     /db_xref="CDD:425499"
     CDS             1..540
                     /gene="LOC107928821"
                     /coded_by="XM_016860099.2:255..1877"
                     /db_xref="GeneID:107928821"
ORIGIN      
        1 mgfvgtvlgi fgfgfgitag lvigyyffiy iqpsdvadpe irplveedqe tlqkmlpeip
       61 fwvknpdydr ldwlnkfley mwpnlnkaic atvkgivkpi ideqipqyki davefealtl
      121 gslpptfqgm kiyvteekel imepsikwaa nanvtiavka yglkataqiv dlqvfalpri
      181 tlkplvpsfp cfanifvslm dkpyvdfglk vvgidlmsvp ilyrfvqeii kdqvanmyhw
      241 pktlevqild pakafdrpvg llhvkviral klkkkdllga sdpyvkiklt dsklpskqtt
      301 vkmknlnpew nedfnftvkd pltqilklyv idweqigkhd kmgmnevplk dltpdepklm
      361 tlalvkkkdt ndaqndksrg qlvveltykp fkeeelpktf qqtktllvra pdntpdgggm
      421 lvvivheaed vegkhhnnpy vrilfrgekr ktkkirktrd prweeeftfm ldeppindki
      481 hlevyssssr iglrrpkesl gfidinlsnv vnnkrinery hlidskngri qielqwrtkd
//
LOCUS       XP_016715587             499 aa            linear   PLN 06-AUG-2024
DEFINITION  synaptotagmin-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715587
VERSION     XP_016715587.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860098.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715587.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..499
                     /product="synaptotagmin-1 isoform X2"
                     /calculated_mol_wt=56986
     Region          2..>468
                     /region_name="COG5038"
                     /note="Ca2+-dependent lipid-binding protein, contains C2
                     domain [General function prediction only]"
                     /db_xref="CDD:227371"
     Region          60..248
                     /region_name="SMP_SYT"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain found in the synaptotagmin family,
                     mostly plants; cd21677"
                     /db_xref="CDD:439233"
     Site            order(85,88..89,93,97,120,125,146,152,154,156,172,174,178,
                     180,195,197,199,209,234,237..238,241,243..246)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:439233"
     CDS             1..499
                     /gene="LOC107928821"
                     /coded_by="XM_016860098.2:254..1753"
                     /db_xref="GeneID:107928821"
ORIGIN      
        1 mgfvgtvlgi fgfgfgitag lvigyyffiy iqpsdvadpe irplveedqe tlqkmlpeip
       61 fwvknpdydr ldwlnkfley mwpnlnkaic atvkgivkpi ideqipqyki davefealtl
      121 gslpptfqgm kiyvteekel imepsikwaa nanvtiavka yglkataqiv dlqvfalpri
      181 tlkplvpsfp cfanifvslm dkpyvdfglk vvgidlmsvp ilyrfvqeii kdqvanmyhw
      241 pktlevqild pakafdrpvg llhvkviral klkkkdllga sdpyvkiklt dsklpskqtt
      301 vkmknlnpew nedfnftvkd pltqilklyv idweqigkhd kmgmnevplk dltpdepklm
      361 tlalvkkkdt ndaqndksrg qlvveltykp fkeeelpktf qqtktllvra pdntpdgggm
      421 lvvivheaed vegkhhnnpy vrilfrgekr ktkkirktrd prweeeftfm ldeppindki
      481 hlevyssssr iglrrpkgp
//
LOCUS       XP_016715536             224 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP21-1 [Gossypium hirsutum].
ACCESSION   XP_016715536
VERSION     XP_016715536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..224
                     /product="peptidyl-prolyl cis-trans isomerase CYP21-1"
                     /calculated_mol_wt=24466
     Region          47..213
                     /region_name="cyclophilin"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; cl00197"
                     /db_xref="CDD:469651"
     Site            order(105,107,110..111,113,151..152,161,163,171..172,176)
                     /site_type="active"
                     /db_xref="CDD:238194"
     CDS             1..224
                     /gene="LOC107928782"
                     /coded_by="XM_016860047.2:281..955"
                     /db_xref="GeneID:107928782"
ORIGIN      
        1 mrreisiliq prclllfisl sillifafsg akreeerive eeheithrvy ldvdidgqrv
       61 griviglyge vvpktvenfr alctgekgkg akgkalhykg tpfhriisgf vvqggdiihg
      121 dgrgsesiyg gtfadenfki khshagvvsm ansgpdsngs qfyittvkas wldgehvvfg
      181 kaiqgmdivy mieggagtys gkprkkviia dsgeipkskw deet
//
LOCUS       XP_016715768             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715768
VERSION     XP_016715768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12419
     CDS             1..110
                     /gene="LOC107928965"
                     /coded_by="XM_016860279.2:95..427"
                     /db_xref="GeneID:107928965"
ORIGIN      
        1 masnekirpv qtnpsrishl fgkylssplq spclsppsrc ppskriqics iktfmvdfln
       61 yrprvpfylh fgkpglfskk kplkvgysfc qerikdiama askfslthet
//
LOCUS       XP_016715630             642 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715630
VERSION     XP_016715630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..642
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70413
     Region          13..>112
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          136..>276
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          182..212
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          220..256
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <500..537
                     /region_name="CdiI_Ct-like"
                     /note="inhibitor (or immunity protein) of the
                     contact-dependent growth inhibition (CDI) system of
                     Cupriavidus taiwanensis CdiI immunity protein and similar
                     proteins; cd20694"
                     /db_xref="CDD:412048"
     Region          553..587
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     CDS             1..642
                     /gene="LOC107928869"
                     /coded_by="XM_016860141.2:356..2284"
                     /db_xref="GeneID:107928869"
ORIGIN      
        1 magvvkqlla rpiqvadmvt kaadeaqsfk qdcqeikgkt eklagllrqv arasndiyer
       61 ptrrivdete qvldkaltlv lkcgatgflg rlftiipaaa frklsmqlen sigdvswlla
      121 vsgdnrddey lglppiaane pilcliweqi anlytgtlee radasaslvs lardndrygk
      181 liieeggvvp llklakegnl egqenaarai gllgrdaesv eqivnagvca vfakilkegq
      241 mkvqsivawa vselaahhpk cqdhfsqnni irflvshiaf etveehskyt ivnkqgvssi
      301 hsvlvaskgp dshkkeetes ninrslgnra aptqmqnvva ntlkgknptp pqpnnqanhp
      361 kggqqvphak snhhprhvsi sgtsikgref edpatkaqmk amaaralwql ckgnlsicrs
      421 itesrallcl aillekstdd vkyysamalv eitavaeqna dlrrssfkpt spaaravvdq
      481 llkiiektdt ellvpcikti ghlartfrat etrivtplvk lldetepevs meavmalnkf
      541 atpknflhvn hskaiveagg vkhliqlvyf geqmvqfpsl tllcyiayni pdsevlaqde
      601 vlivlewask qahlsgdpdi ddllpeaksr lelyqsrgkr fh
//
LOCUS       XP_016715539             522 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DMR6-LIKE OXYGENASE 1 [Gossypium hirsutum].
ACCESSION   XP_016715539
VERSION     XP_016715539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..522
                     /product="protein DMR6-LIKE OXYGENASE 1"
                     /calculated_mol_wt=59170
     Region          44..175
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     Region          178..521
                     /region_name="PLN02750"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:178351"
     CDS             1..522
                     /gene="LOC107928785"
                     /coded_by="XM_016860050.2:38..1606"
                     /db_xref="GeneID:107928785"
ORIGIN      
        1 menlailllv iflvampmay cvkegaeevd ewfdklpyak qkvtklhfff hdrfagkhnr
       61 tavrvahgpe tdksptsfgl vfimddplte rmnptskelg raqglyafsg qdelsllmsf
      121 nlvfttgefn gstltvlgrn pavphrempi vggsgvfrma rgvasaklrs fnmttvsmge
      181 vdqafiqsie hranldniei egiplidlsl shttdinllv seignacknw gffqvinhgv
      241 pwkllekikv aakaffdqpv eekrkvkrde vnamgyhese htknvrdwke vfdflikdps
      301 flpaspeted deirtlsnqw petppqfrev cqtyarevek lgykllelis lslglpsnrl
      361 ngyfedhttm mrlnhyppcp cpelalgvgr hkdagaltiv aqddvgglqv rrksddvwvp
      421 vkptpnalvi nvgdtiqvws neayesmehr vvvnsererf sipvfffpsh yvmvkpleel
      481 vnegnppkyk pynfgkffva rnrsdykkle vqniqisdfk ii
//
LOCUS       XP_016715584             171 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase 1 [Gossypium hirsutum].
ACCESSION   XP_016715584
VERSION     XP_016715584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860095.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="peptidyl-prolyl cis-trans isomerase 1"
                     /calculated_mol_wt=18084
     Region          4..169
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(61..62,67,118,120,128)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..171
                     /gene="LOC107928818"
                     /coded_by="XM_016860095.2:64..579"
                     /db_xref="GeneID:107928818"
ORIGIN      
        1 mgnpkvffdm tigsqpagri vmelfadctp rtaenfralc tgekgvgrsg kplhyqgstf
       61 hrvipnfmcq ggdftagngt ggesiygakf edenfikkht gpgilsmana gpgtngsqff
      121 icttktewld gkhvvfgqvv egmdvvrdie kvgssggrts kpvviadcgq l
//
LOCUS       XP_016715733             309 aa            linear   PLN 06-AUG-2024
DEFINITION  NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Gossypium
            hirsutum].
ACCESSION   XP_016715733
VERSION     XP_016715733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..309
                     /product="NADP-dependent D-sorbitol-6-phosphate
                     dehydrogenase"
                     /calculated_mol_wt=34820
     Region          1..308
                     /region_name="AKR_AKR2A1-2"
                     /note="AKR2A family of aldo-keto reductase (AKR); cd19112"
                     /db_xref="CDD:381338"
     Site            order(17..19,42,46..47,76,107..108,160..161,182,208..214,
                     232,244,259..264,267,270..271)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:381338"
     Site            order(42,47,76,107)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381338"
     CDS             1..309
                     /gene="LOC107928936"
                     /coded_by="XM_016860244.2:230..1159"
                     /db_xref="GeneID:107928936"
ORIGIN      
        1 maitlnngfk mpvvglgvwr mdgkdvrdli insiklgyrh fdcaadykne aevgealsea
       61 fktglvkred lfittklwns dhghvleack dslkklqldy ldlylvhfpv avkhtgvgqt
      121 dspldkdgvl didttislet twhamedlvs kglvrsigis nydifltrdc layskvkpav
      181 nqiethpyfq rdclvkfcqk hgicvtahtp lggaaanaew fgtvsclddp vlkalaekyk
      241 ktvaqivlrw giqrntvvip ktskferlke nfevfdfela kedmdkikai drkyrtnqpa
      301 kfwgidlya
//
LOCUS       XP_040942530             254 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942530
VERSION     XP_040942530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086596.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="B-box zinc finger protein 19 isoform X1"
                     /calculated_mol_wt=27799
     Region          4..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          56..96
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..254
                     /gene="LOC107928794"
                     /coded_by="XM_041086596.1:297..1061"
                     /db_xref="GeneID:107928794"
ORIGIN      
        1 mrtlcdvces aaaiifcaad eaalcrscde kvhmcnklas rhvrvgladp sdvprcdice
       61 napaffycev dgsslclqcd mivhvggkrt hgrylllrqr vefsgdkpad leelrlqpvd
      121 pndfpgdkpa hleelglqpv dpndfpgdkp ahleelglqp vdlndvrkdq kwqpnfagre
      181 nqqnhrlslv paldgngdgd gkvgnklidl ntnpqrlhgq astiqeqamd vssdnnhdsa
      241 svvpvgsfkr epdk
//
LOCUS       XP_040942531             254 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942531
VERSION     XP_040942531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086597.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="B-box zinc finger protein 19 isoform X1"
                     /calculated_mol_wt=27799
     Region          4..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          56..96
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..254
                     /gene="LOC107928794"
                     /coded_by="XM_041086597.1:330..1094"
                     /db_xref="GeneID:107928794"
ORIGIN      
        1 mrtlcdvces aaaiifcaad eaalcrscde kvhmcnklas rhvrvgladp sdvprcdice
       61 napaffycev dgsslclqcd mivhvggkrt hgrylllrqr vefsgdkpad leelrlqpvd
      121 pndfpgdkpa hleelglqpv dpndfpgdkp ahleelglqp vdlndvrkdq kwqpnfagre
      181 nqqnhrlslv paldgngdgd gkvgnklidl ntnpqrlhgq astiqeqamd vssdnnhdsa
      241 svvpvgsfkr epdk
//
LOCUS       XP_016715551             233 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 19 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715551
VERSION     XP_016715551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860062.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="B-box zinc finger protein 19 isoform X2"
                     /calculated_mol_wt=25529
     Region          4..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          56..96
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..233
                     /gene="LOC107928794"
                     /coded_by="XM_016860062.2:297..998"
                     /db_xref="GeneID:107928794"
ORIGIN      
        1 mrtlcdvces aaaiifcaad eaalcrscde kvhmcnklas rhvrvgladp sdvprcdice
       61 napaffycev dgsslclqcd mivhvggkrt hgrylllrqr vefsgdkpad leelrlqpvd
      121 pndfpgdkpa hleelglqpv dlndvrkdqk wqpnfagren qqnhrlslvp aldgngdgdg
      181 kvgnklidln tnpqrlhgqa stiqeqamdv ssdnnhdsas vvpvgsfkre pdk
//
LOCUS       XP_016715552             233 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 19 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016715552
VERSION     XP_016715552.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715552.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="B-box zinc finger protein 19 isoform X3"
                     /calculated_mol_wt=25462
     Region          4..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          56..96
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..233
                     /gene="LOC107928794"
                     /coded_by="XM_016860063.2:297..998"
                     /db_xref="GeneID:107928794"
ORIGIN      
        1 mrtlcdvces aaaiifcaad eaalcrscde kvhmcnklas rhvrvgladp sdvprcdice
       61 napaffycev dgsslclqcd mivhvggkrt hgrylllrqr vefpgdkpah leelglqpvd
      121 pndfpgdkpa hleelglqpv dlndvrkdqk wqpnfagren qqnhrlslvp aldgngdgdg
      181 kvgnklidln tnpqrlhgqa stiqeqamdv ssdnnhdsas vvpvgsfkre pdk
//
LOCUS       XP_016715553             212 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 19 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016715553
VERSION     XP_016715553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="B-box zinc finger protein 19 isoform X4"
                     /calculated_mol_wt=23191
     Region          4..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          56..96
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..212
                     /gene="LOC107928794"
                     /coded_by="XM_016860064.2:297..935"
                     /db_xref="GeneID:107928794"
ORIGIN      
        1 mrtlcdvces aaaiifcaad eaalcrscde kvhmcnklas rhvrvgladp sdvprcdice
       61 napaffycev dgsslclqcd mivhvggkrt hgrylllrqr vefpgdkpah leelglqpvd
      121 lndvrkdqkw qpnfagrenq qnhrlslvpa ldgngdgdgk vgnklidlnt npqrlhgqas
      181 tiqeqamdvs sdnnhdsasv vpvgsfkrep dk
//
LOCUS       XP_016715723             427 aa            linear   PLN 06-AUG-2024
DEFINITION  squalene synthase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715723
VERSION     XP_016715723.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860234.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..427
                     /product="squalene synthase 2 isoform X1"
                     /calculated_mol_wt=48762
     Region          35..381
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(47..51,312..315)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173831"
     Site            order(49,51,70,74,77,81,168,173,177,202,205,212..213,
                     216..217,225,285..286)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173831"
     Site            order(51,70,77,81,168,176,180,205,212..213,217,225,
                     285..286,290)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173831"
     Site            order(77..81,213..217)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173831"
     Site            77..81
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173831"
     Site            213..217
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173831"
     CDS             1..427
                     /gene="LOC107928928"
                     /coded_by="XM_016860234.2:389..1672"
                     /db_xref="GeneID:107928928"
ORIGIN      
        1 mgslgalmkh pddfypllkl kmaarnaekq ipsephwgfc fsmlhkvsrs falviqqldt
       61 elrhavcify lvlraldtve ddtsvaadvk vpilidfyrh iydpdwhfsc gtkeykvlmd
      121 qfhhvsaafl elekgyqeai editlrmgag makfickeve tvddydeych yvaglvglgl
      181 sklfhaygse dlapeslsns mglflqktni irdyledine ipksrmfwpr qiwskyvkkl
      241 edlkdeensv kavqclndmv tnallhvddc lkymsalrdp aifrfcaipq imaigtlalc
      301 ynnikvfrgv vkmrrvfqvd vhfisasfpg ltakvidrtk smtdvygafy dfscilkakv
      361 dkndpnaqkt vsrldsilkt crdsgvlnkr ksyiienqsn ytpfvvvllf iifaiflvnl
      421 npnwpnn
//
LOCUS       XP_016715724             413 aa            linear   PLN 06-AUG-2024
DEFINITION  squalene synthase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715724
VERSION     XP_016715724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860235.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..413
                     /product="squalene synthase 2 isoform X2"
                     /calculated_mol_wt=47187
     Region          35..367
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(47..51,312..315)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173831"
     Site            order(49,51,70,74,77,81,168,173,177,202,205,212..213,
                     216..217,225,285..286)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173831"
     Site            order(51,70,77,81,168,176,180,205,212..213,217,225,
                     285..286,290)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173831"
     Site            order(77..81,213..217)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173831"
     Site            77..81
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173831"
     Site            213..217
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173831"
     CDS             1..413
                     /gene="LOC107928928"
                     /coded_by="XM_016860235.2:389..1630"
                     /db_xref="GeneID:107928928"
ORIGIN      
        1 mgslgalmkh pddfypllkl kmaarnaekq ipsephwgfc fsmlhkvsrs falviqqldt
       61 elrhavcify lvlraldtve ddtsvaadvk vpilidfyrh iydpdwhfsc gtkeykvlmd
      121 qfhhvsaafl elekgyqeai editlrmgag makfickeve tvddydeych yvaglvglgl
      181 sklfhaygse dlapeslsns mglflqktni irdyledine ipksrmfwpr qiwskyvkkl
      241 edlkdeensv kavqclndmv tnallhvddc lkymsalrdp aifrfcaipq imaigtlalc
      301 ynnikvfrgv vkmrrgltak vidrtksmtd vygafydfsc ilkakvdknd pnaqktvsrl
      361 dsilktcrds gvlnkrksyi ienqsnytpf vvvllfiifa iflvnlnpnw pnn
//
LOCUS       XP_016715725             370 aa            linear   PLN 06-AUG-2024
DEFINITION  SH3 domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016715725
VERSION     XP_016715725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..370
                     /product="SH3 domain-containing protein 2"
                     /calculated_mol_wt=41549
     Region          48..257
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(56,59..60,64,66..67,70..71,73..74,84..85,87..88,
                     91..92,94..95,98,114,117..118,219,222..223,225,230,
                     233..234,236..237,240..241,244..245,247..248,251..252,
                     254..255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          305..357
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(310,312,315,319,337..338,351,353..354)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212690"
     CDS             1..370
                     /gene="LOC107928929"
                     /coded_by="XM_016860236.2:164..1276"
                     /db_xref="GeneID:107928929"
ORIGIN      
        1 meairkqasr freqvarqqq avlkqfgagg yggsdnlitd eaelqqhqkl eklyistrta
       61 khfqrdivrg vegyiiigsk qveietklse dskkygsent ctsgntlska alsfgrarah
      121 mekehgnllk algtqvaepl ramvmgsple darhlaqryd rmrqeaesqt ievskrqarm
      181 rempgnhdlv mklesaetkl hdlksnmsil gkeaasamat vegqqqrltl qrliamveae
      241 rtyhqrvlqi ldqlesemis erqrleappa psvvdmpspp pfeevngvyt sqthnestdc
      301 mgyflgevmy pyngesdtel nlstgdyivv rkvtnngwae geckgkagwf pfayiekrer
      361 vlaskvtevf
//
LOCUS       XP_040942534             326 aa            linear   PLN 06-AUG-2024
DEFINITION  protein terminal ear1 homolog [Gossypium hirsutum].
ACCESSION   XP_040942534
VERSION     XP_040942534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086600.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..326
                     /product="protein terminal ear1 homolog"
                     /calculated_mol_wt=37207
     Region          174..274
                     /region_name="RRM3_MEI2_EAR1_like"
                     /note="RNA recognition motif 3 (RRM3) found in Mei2-like
                     proteins and terminal EAR1-like proteins; cd12277"
                     /db_xref="CDD:409719"
     CDS             1..326
                     /gene="LOC107928831"
                     /coded_by="XM_041086600.1:30..1010"
                     /db_xref="GeneID:107928831"
ORIGIN      
        1 mavrtdqkfp hkmeigcfsl npeapeffpa rytlvpapsf pilqtinppy nllyyylplq
       61 ypfaftappp prhqnavlph sssletdvvl vtepfkakkg fnrnkyhwkg rrgcggaara
      121 arkkewrakp cfngdddddd qasfectrkv qywaggekqp liplqsggse ttimiknipv
      181 rytremlkef ldqhcmvtnr eaksnannee pslsaydfly lpidfvtrsn kgyafvnftt
      241 piaarkfyda cddkqwecfm snkirqiyca klqginellk hfekmgfpce dfqplcfnpa
      301 rdgskqpvee tvvgrcigsw ctnsks
//
LOCUS       XP_040942535            1068 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7D, mitochondrial isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942535
VERSION     XP_040942535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086601.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1068
                     /product="kinesin-like protein KIN-7D, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=119289
     Region          96..443
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(104,176,179,181..184,349)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(396,399,402)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          <615..970
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1068
                     /gene="LOC107928918"
                     /coded_by="XM_041086601.1:352..3558"
                     /db_xref="GeneID:107928918"
ORIGIN      
        1 mdysyparss splsyrksss fsstsstssf fsnkpmhhms ssssssffns gseygsrsms
       61 dsmhygsqgy narppvaygs deiigepfea srpgdsisvt irfrplnere fhrgdeiawy
      121 adednivrne ynpatayafd kvfgpqatsq evyevaakpi vkaamegvng tvfaygvtss
      181 gkthtmhgdq napgiiplai kdvfsiiqdt pgrefllrvs yleiynevin dlldptgqnl
      241 rvredaqgty iegvkeevvl spghalsfia ageehrhvgs nnfnlfssrs htiftlmies
      301 sargdeydgv ifsqlvwfnq sfifqertfl lingltcyfl csfiqnlidl agsessktdt
      361 tgirrkegsy inkslltlgt vigklsegka chvpyrdskl trllqsslsg hglvslictv
      421 tpassnmeet hntlkfasra krveiyasrn kiidekslik kyqreisvlk eeldrlrkgm
      481 vvgvnheell slkqqleegq vkmqsrleee eeakaalmsr iqrltklilv stkntipgsl
      541 sdlpshqrrh svgeedkldl rvgdtllidd enqkdspslv salvtgpcye fkhrrsssrr
      601 ndefspasrt ftestqagel itgskplagr mtsdqmdllv eqvkmlagei alststlkrl
      661 vdqsvndpdg sktqiqnler eiqekkrqmr vleqritese asiskatfvd mqqkvmklmt
      721 qcneqgfele iksadnrilq eqlqnkcsei eelqekvnll eqhlaslsgd klllsskegi
      781 seeyvdelrk kvqsqeiene kikleqvqls eeasglrvqn qklaeeasya kelasaaave
      841 lkslagevtk lsvqngklek eliaarelah srsfanstfn gvnrkyndsm rsgrkgrlsg
      901 rsqdfsvavg ddfeswnldl ddlkmelqar kqqeaalkaa laekeliede yrkkveeakk
      961 reealendla nmwvlvaklk kggaaatlds ntdephsngt dniedpkann iesnnvlker
     1021 qvsevpskpa nerpkeeplv vrlkarmqem kekelkslgn gdtnsyil
//
LOCUS       XP_040942536            1057 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7D, mitochondrial isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942536
VERSION     XP_040942536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086602.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1057
                     /product="kinesin-like protein KIN-7D, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=117935
     Region          96..443
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(104,176,179,181..184,349)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(396,399,402)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          <615..959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1057
                     /gene="LOC107928918"
                     /coded_by="XM_041086602.1:352..3525"
                     /db_xref="GeneID:107928918"
ORIGIN      
        1 mdysyparss splsyrksss fsstsstssf fsnkpmhhms ssssssffns gseygsrsms
       61 dsmhygsqgy narppvaygs deiigepfea srpgdsisvt irfrplnere fhrgdeiawy
      121 adednivrne ynpatayafd kvfgpqatsq evyevaakpi vkaamegvng tvfaygvtss
      181 gkthtmhgdq napgiiplai kdvfsiiqdt pgrefllrvs yleiynevin dlldptgqnl
      241 rvredaqgty iegvkeevvl spghalsfia ageehrhvgs nnfnlfssrs htiftlmies
      301 sargdeydgv ifsqlvwfnq sfifqertfl lingltcyfl csfiqnlidl agsessktdt
      361 tgirrkegsy inkslltlgt vigklsegka chvpyrdskl trllqsslsg hglvslictv
      421 tpassnmeet hntlkfasra krveiyasrn kiidekslik kyqreisvlk eeldrlrkgm
      481 vvgvnheell slkqqleegq vkmqsrleee eeakaalmsr iqrltklilv stkntipgsl
      541 sdlpshqrrh svgeedkldl rvgdtllidd enqkdspslv salvtgpcye fkhrrsssrr
      601 ndefspasrt ftestqagel itgskplagr mtsdqmdllv eqvkmlagei alststlkrl
      661 vdqsvndpdg sktqiqnler eiqekkrqmr vleqritese asiskatfvd mqqkvmklmt
      721 qcneqgfele iksadnrilq eqlqnkcsei eelqekvnll eqhlaslsgd klllsskegi
      781 seeyvdelrk kvqsqvqlse easglrvqnq klaeeasyak elasaaavel kslagevtkl
      841 svqngkleke liaarelahs rsfanstfng vnrkyndsmr sgrkgrlsgr sqdfsvavgd
      901 dfeswnldld dlkmelqark qqeaalkaal aekeliedey rkkveeakkr eealendlan
      961 mwvlvaklkk ggaaatldsn tdephsngtd niedpkanni esnnvlkerq vsevpskpan
     1021 erpkeeplvv rlkarmqemk ekelkslgng dtnsyil
//
LOCUS       XP_016715699            1039 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7D, mitochondrial isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016715699
VERSION     XP_016715699.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715699.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1039
                     /product="kinesin-like protein KIN-7D, mitochondrial
                     isoform X3"
                     /calculated_mol_wt=115756
     Region          96..413
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(104,176,179,181..184,319)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(366,369,372)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          <610..941
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1039
                     /gene="LOC107928918"
                     /coded_by="XM_016860210.2:352..3471"
                     /db_xref="GeneID:107928918"
ORIGIN      
        1 mdysyparss splsyrksss fsstsstssf fsnkpmhhms ssssssffns gseygsrsms
       61 dsmhygsqgy narppvaygs deiigepfea srpgdsisvt irfrplnere fhrgdeiawy
      121 adednivrne ynpatayafd kvfgpqatsq evyevaakpi vkaamegvng tvfaygvtss
      181 gkthtmhgdq napgiiplai kdvfsiiqdt pgrefllrvs yleiynevin dlldptgqnl
      241 rvredaqgty iegvkeevvl spghalsfia ageehrhvgs nnfnlfssrs htiftlmies
      301 sargdeydgv ifsqlnlidl agsessktdt tgirrkegsy inkslltlgt vigklsegka
      361 chvpyrdskl trllqsslsg hglvslictv tpassnmeet hntlkfasra krveiyasrn
      421 kiidekslik kyqreisvlk eeldrlrkgm vvgvnheell slkqqleegq vkmqsrleee
      481 eeakaalmsr iqrltklilv stkntipgsl sdlpshqrrh svgeedqkld lrvgdtllid
      541 denqkdspsl vsalvtgpcy efkhrrsssr rndefspasr tftestqage litgskplag
      601 rmtsdqmdll veqvkmlage ialststlkr lvdqsvndpd gsktqiqnle reiqekkrqm
      661 rvleqrites easiskatfv dmqqkvmklm tqcneqgfel eiksadnril qeqlqnkcse
      721 ieelqekvnl leqhlaslsg dklllsskeg iseeyvdelr kkvqsqeien ekikleqvql
      781 seeasglrvq nqklaeeasy akelasaaav elkslagevt klsvqngkle keliaarela
      841 hsrsfanstf ngvnrkynds mrsgrkgrls grsqdfsvav gddfeswnld lddlkmelqa
      901 rkqqeaalka alaekelied eyrkkveeak kreealendl anmwvlvakl kkggaaatld
      961 sntdephsng tdniedpkan niesnnvlke rqvsevpskp anerpkeepl vvrlkarmqe
     1021 mkekelkslg ngdtnsyil
//
LOCUS       XP_016715700            1038 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7D, mitochondrial isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016715700
VERSION     XP_016715700.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715700.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1038
                     /product="kinesin-like protein KIN-7D, mitochondrial
                     isoform X4"
                     /calculated_mol_wt=115628
     Region          96..413
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(104,176,179,181..184,319)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(366,369,372)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          <609..940
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1038
                     /gene="LOC107928918"
                     /coded_by="XM_016860211.2:352..3468"
                     /db_xref="GeneID:107928918"
ORIGIN      
        1 mdysyparss splsyrksss fsstsstssf fsnkpmhhms ssssssffns gseygsrsms
       61 dsmhygsqgy narppvaygs deiigepfea srpgdsisvt irfrplnere fhrgdeiawy
      121 adednivrne ynpatayafd kvfgpqatsq evyevaakpi vkaamegvng tvfaygvtss
      181 gkthtmhgdq napgiiplai kdvfsiiqdt pgrefllrvs yleiynevin dlldptgqnl
      241 rvredaqgty iegvkeevvl spghalsfia ageehrhvgs nnfnlfssrs htiftlmies
      301 sargdeydgv ifsqlnlidl agsessktdt tgirrkegsy inkslltlgt vigklsegka
      361 chvpyrdskl trllqsslsg hglvslictv tpassnmeet hntlkfasra krveiyasrn
      421 kiidekslik kyqreisvlk eeldrlrkgm vvgvnheell slkqqleegq vkmqsrleee
      481 eeakaalmsr iqrltklilv stkntipgsl sdlpshqrrh svgeedkldl rvgdtllidd
      541 enqkdspslv salvtgpcye fkhrrsssrr ndefspasrt ftestqagel itgskplagr
      601 mtsdqmdllv eqvkmlagei alststlkrl vdqsvndpdg sktqiqnler eiqekkrqmr
      661 vleqritese asiskatfvd mqqkvmklmt qcneqgfele iksadnrilq eqlqnkcsei
      721 eelqekvnll eqhlaslsgd klllsskegi seeyvdelrk kvqsqeiene kikleqvqls
      781 eeasglrvqn qklaeeasya kelasaaave lkslagevtk lsvqngklek eliaarelah
      841 srsfanstfn gvnrkyndsm rsgrkgrlsg rsqdfsvavg ddfeswnldl ddlkmelqar
      901 kqqeaalkaa laekeliede yrkkveeakk reealendla nmwvlvaklk kggaaatlds
      961 ntdephsngt dniedpkann iesnnvlker qvsevpskpa nerpkeeplv vrlkarmqem
     1021 kekelkslgn gdtnsyil
//
LOCUS       XP_040942537            1027 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7D, mitochondrial isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040942537
VERSION     XP_040942537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086603.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1027
                     /product="kinesin-like protein KIN-7D, mitochondrial
                     isoform X5"
                     /calculated_mol_wt=114274
     Region          96..413
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(104,176,179,181..184,319)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(366,369,372)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          <609..929
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1027
                     /gene="LOC107928918"
                     /coded_by="XM_041086603.1:352..3435"
                     /db_xref="GeneID:107928918"
ORIGIN      
        1 mdysyparss splsyrksss fsstsstssf fsnkpmhhms ssssssffns gseygsrsms
       61 dsmhygsqgy narppvaygs deiigepfea srpgdsisvt irfrplnere fhrgdeiawy
      121 adednivrne ynpatayafd kvfgpqatsq evyevaakpi vkaamegvng tvfaygvtss
      181 gkthtmhgdq napgiiplai kdvfsiiqdt pgrefllrvs yleiynevin dlldptgqnl
      241 rvredaqgty iegvkeevvl spghalsfia ageehrhvgs nnfnlfssrs htiftlmies
      301 sargdeydgv ifsqlnlidl agsessktdt tgirrkegsy inkslltlgt vigklsegka
      361 chvpyrdskl trllqsslsg hglvslictv tpassnmeet hntlkfasra krveiyasrn
      421 kiidekslik kyqreisvlk eeldrlrkgm vvgvnheell slkqqleegq vkmqsrleee
      481 eeakaalmsr iqrltklilv stkntipgsl sdlpshqrrh svgeedkldl rvgdtllidd
      541 enqkdspslv salvtgpcye fkhrrsssrr ndefspasrt ftestqagel itgskplagr
      601 mtsdqmdllv eqvkmlagei alststlkrl vdqsvndpdg sktqiqnler eiqekkrqmr
      661 vleqritese asiskatfvd mqqkvmklmt qcneqgfele iksadnrilq eqlqnkcsei
      721 eelqekvnll eqhlaslsgd klllsskegi seeyvdelrk kvqsqvqlse easglrvqnq
      781 klaeeasyak elasaaavel kslagevtkl svqngkleke liaarelahs rsfanstfng
      841 vnrkyndsmr sgrkgrlsgr sqdfsvavgd dfeswnldld dlkmelqark qqeaalkaal
      901 aekeliedey rkkveeakkr eealendlan mwvlvaklkk ggaaatldsn tdephsngtd
      961 niedpkanni esnnvlkerq vsevpskpan erpkeeplvv rlkarmqemk ekelkslgng
     1021 dtnsyil
//
LOCUS       XP_016715589             204 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 20 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715589
VERSION     XP_016715589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..204
                     /product="B-box zinc finger protein 20 isoform X1"
                     /calculated_mol_wt=22557
     Region          10..53
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          61..104
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..204
                     /gene="LOC107928824"
                     /coded_by="XM_016860100.2:188..802"
                     /db_xref="GeneID:107928824"
ORIGIN      
        1 meqkrkmkiw cevcdkeeai vfcpadeaal cgvcdhnvhh anklatkhcr fallqpddsp
       61 lcdicqekra llfcqedrai lcrecdipih kaneqttkhn rflltgvkls sssssstgfp
      121 palntvssss ngsyggqtic seaettsqsn neiekplaty riehnytigd ddvlvsmsis
      181 eylmetlpgw rvddflepss yaac
//
LOCUS       XP_016715590             172 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 20 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715590
VERSION     XP_016715590.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="B-box zinc finger protein 20 isoform X2"
                     /calculated_mol_wt=19402
     Region          10..53
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          61..99
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..172
                     /gene="LOC107928824"
                     /coded_by="XM_016860101.2:188..706"
                     /db_xref="GeneID:107928824"
ORIGIN      
        1 meqkrkmkiw cevcdkeeai vfcpadeaal cgvcdhnvhh anklatkhcr fallqpddsp
       61 lcdicqekra llfcqedrai lcrecdipih kaneqttkhn syggqticse aettsqsnne
      121 iekplatyri ehnytigddd vlvsmsisey lmetlpgwrv ddflepssya ac
//
LOCUS       XP_016715538             820 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit a3 [Gossypium hirsutum].
ACCESSION   XP_016715538
VERSION     XP_016715538.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860049.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715538.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..820
                     /product="V-type proton ATPase subunit a3"
                     /calculated_mol_wt=92982
     Region          37..812
                     /region_name="V_ATPase_I"
                     /note="V-type ATPase 116kDa subunit family; pfam01496"
                     /db_xref="CDD:460232"
     CDS             1..820
                     /gene="LOC107928784"
                     /coded_by="XM_016860049.2:220..2682"
                     /db_xref="GeneID:107928784"
ORIGIN      
        1 mgdtrggccp pmdlfrsetm qlvqliipme sarltvyylg klgllqfkdl nsdkspfqrt
       61 yagqikkcge martlrffke qmlkagvsps aksveeteid vddlevklae leaeltemna
      121 ngeklqrsyn elveykivlr kagdffpsaq hsatarqrem elnqmveesi etpllqeqat
      181 stdlskqvkl gfvtglvsrg ksmaferilf ratrgnvflk qvpieapitd pvsgekmekn
      241 vfmvfysger vknkilkicd afganrypfa edcgkqalmi sevsgkisel kstidagllh
      301 rdhllrtigd qfeqwnlkvk keksihhtln mlsldvtkkc lvaeawspvf atkqiqdvlq
      361 rasvdsnsqv gaifqvlhtr espptyfrtn kftsafqeiv daygvakyqe anpgvytivt
      421 fpflfavmfg dwghgiclll atlffiirek klssqklgdi temtfggryv immmslfsiy
      481 tgfiynecfs vafdlfapsa yacrdlscrd adsiglikvr dtypfgvdpa whgtrselpf
      541 lnslkmkmsi llgvaqmnlg ilisysnatf fgkslniwfq fipqmiflns lfgylsllii
      601 vkwctgsqad lyhimiymfl sptdelgdnq lfpyqktvql vllllalvsv pwmllpkpfl
      661 lkkqhenrhq gqsytqvqst ddalseanhd shghgheefe fsevfvhqli htiefvlgav
      721 sntasylrlw alslahsqls ivfyekvlll awgynnmvil vvgiiififa tvgvllimet
      781 lsaflhalrl hwvefqnkfy egdgykfypf sfiliddedh
//
LOCUS       XP_016715726             508 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 13 [Gossypium hirsutum].
ACCESSION   XP_016715726
VERSION     XP_016715726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="WD repeat-containing protein 13"
                     /calculated_mol_wt=55817
     Region          <192..500
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          195..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..349
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          322..363
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          372..413
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          422..467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..499
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..508
                     /gene="LOC107928930"
                     /coded_by="XM_016860237.2:261..1787"
                     /db_xref="GeneID:107928930"
ORIGIN      
        1 maevtsmnnc skdggateav tnngctingt gkdmikvtvk kanvkdpeif sclvqpassd
       61 sdldsvgvrr fllarkaesg vhrrldwrcn gkgyvayrny irrprnwens qipsypstpg
      121 nsgrwmltss plsrlseves wssskdlrsg tlasnhrtsf sssisdsdhp rgqgvepays
      181 fvgmhcifdq cksavtvlkf ghmssdllay gasdgtltvc nvsdpptvin qlkghskdvt
      241 dfdfssnnqy iasssadktv rvwelskgfc irviygvspq lcirfhpvnn nflsvgnank
      301 eitvfnfstg rviaksifds evtsmdhdht ghlifcgdaq gciysvtmds htgalsrshr
      361 yrssskqkfp ittvqyrsfs llaggpvllt ctkdgslsff svalevqgyl tlrcslkltp
      421 rihsirasfc pllslnkgey ivagsedsnv yfydltrpkh tcvnklqghr fpvlvvawnh
      481 genflasadl ygvvivwkra ktsykgni
//
LOCUS       XP_016715727             508 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 13 [Gossypium hirsutum].
ACCESSION   XP_016715727
VERSION     XP_016715727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="WD repeat-containing protein 13"
                     /calculated_mol_wt=55817
     Region          <192..500
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          195..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..349
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          322..363
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          372..413
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          422..467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..499
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..508
                     /gene="LOC107928930"
                     /coded_by="XM_016860238.2:261..1787"
                     /db_xref="GeneID:107928930"
ORIGIN      
        1 maevtsmnnc skdggateav tnngctingt gkdmikvtvk kanvkdpeif sclvqpassd
       61 sdldsvgvrr fllarkaesg vhrrldwrcn gkgyvayrny irrprnwens qipsypstpg
      121 nsgrwmltss plsrlseves wssskdlrsg tlasnhrtsf sssisdsdhp rgqgvepays
      181 fvgmhcifdq cksavtvlkf ghmssdllay gasdgtltvc nvsdpptvin qlkghskdvt
      241 dfdfssnnqy iasssadktv rvwelskgfc irviygvspq lcirfhpvnn nflsvgnank
      301 eitvfnfstg rviaksifds evtsmdhdht ghlifcgdaq gciysvtmds htgalsrshr
      361 yrssskqkfp ittvqyrsfs llaggpvllt ctkdgslsff svalevqgyl tlrcslkltp
      421 rihsirasfc pllslnkgey ivagsedsnv yfydltrpkh tcvnklqghr fpvlvvawnh
      481 genflasadl ygvvivwkra ktsykgni
//
LOCUS       XP_016715728             217 aa            linear   PLN 06-AUG-2024
DEFINITION  chromatin remodeling protein SHL [Gossypium hirsutum].
ACCESSION   XP_016715728
VERSION     XP_016715728.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860239.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715728.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..217
                     /product="chromatin remodeling protein SHL"
                     /calculated_mol_wt=24798
     Region          22..157
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          141..187
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(141,154..157,161,182)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277035"
     CDS             1..217
                     /gene="LOC107928932"
                     /coded_by="XM_016860239.2:155..808"
                     /db_xref="GeneID:107928932"
ORIGIN      
        1 makgkaprrt ldsytlrnin ktikagdcvl mrpaerskpq yvarieriea darggnvkvh
       61 vrwyyrpees iggrrqfhgs kevflsdhyd vqsadtieak ctvhsfksyt kldavgnddf
      121 fcrfeynsat gafnpdrvav yckcempynp ddlmvqcegc sdwfhpacie mtaeevklld
      181 hyfcetclse dpkklqnsla ssvdldtkvd akkrrrr
//
LOCUS       XP_040942539             217 aa            linear   PLN 06-AUG-2024
DEFINITION  chromatin remodeling protein SHL [Gossypium hirsutum].
ACCESSION   XP_040942539
VERSION     XP_040942539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086605.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..217
                     /product="chromatin remodeling protein SHL"
                     /calculated_mol_wt=24798
     Region          22..157
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          141..187
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(141,154..157,161,182)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277035"
     CDS             1..217
                     /gene="LOC107928932"
                     /coded_by="XM_041086605.1:136..789"
                     /db_xref="GeneID:107928932"
ORIGIN      
        1 makgkaprrt ldsytlrnin ktikagdcvl mrpaerskpq yvarieriea darggnvkvh
       61 vrwyyrpees iggrrqfhgs kevflsdhyd vqsadtieak ctvhsfksyt kldavgnddf
      121 fcrfeynsat gafnpdrvav yckcempynp ddlmvqcegc sdwfhpacie mtaeevklld
      181 hyfcetclse dpkklqnsla ssvdldtkvd akkrrrr
//
LOCUS       XP_016715669             529 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional dihydrofolate reductase-thymidylate synthase 1
            [Gossypium hirsutum].
ACCESSION   XP_016715669
VERSION     XP_016715669.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860180.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715669.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="bifunctional dihydrofolate reductase-thymidylate
                     synthase 1"
                     /calculated_mol_wt=59283
     Region          22..529
                     /region_name="PTZ00164"
                     /note="bifunctional dihydrofolate reductase-thymidylate
                     synthase; Provisional"
                     /db_xref="CDD:240299"
     CDS             1..529
                     /gene="LOC107928896"
                     /coded_by="XM_016860180.2:381..1970"
                     /db_xref="GeneID:107928896"
ORIGIN      
        1 msadtmmnvp ngngngnaqp dpqrtyqvvv aatkdmgigk dgklpwnlps dlkffkditl
       61 ttsdsgkkna vimgrktwes iplknrplpg rlnvvltrsg sfdiataenv vicgsmtsal
      121 ellaaspycl siekvfvigg gqilreslna agcdaihite ietniecdtf mpaidtavfq
      181 pwyssfpmve ndirycftty vrvrtstieh lcqncdlvvd nkpdtgkfev kkfsflpkmi
      241 frkheeylyl nmiqdiisgg nlkddrtgtg tlsmfgcqmr fnlrktfpll ttkkvfwrgv
      301 veellwfisg stnakvlqek gihiwdgnas rdfldsiglt sreegdlgpv ygfqwrhfga
      361 rytdmhadyt gqgfdqlldv idkiknnlnd griilsawnp sdlklmalpp chmfaqfyva
      421 neelscqmyq rsadmglgvp fniasyallt cmiahvcdli pgdfihvlgd thvysthvrp
      481 lqeqlqklpk pfpilkinpe kknidsfvas dfkligydph ekiemkmav
//
LOCUS       XP_016715671             170 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S25-4 [Gossypium hirsutum].
ACCESSION   XP_016715671
VERSION     XP_016715671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860182.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="40S ribosomal protein S25-4"
                     /calculated_mol_wt=18793
     Region          67..166
                     /region_name="Ribosomal_S25"
                     /note="S25 ribosomal protein; pfam03297"
                     /db_xref="CDD:460876"
     CDS             1..170
                     /gene="LOC107928897"
                     /coded_by="XM_016860182.2:16..528"
                     /db_xref="GeneID:107928897"
ORIGIN      
        1 mgkhpigsdf nqpknpsvte kkaipfplsp slyipphpkq kpiptkaalh llpfllhfqq
       61 ipmapkkdka pppsskpaks gggkqkkkkw skgkqkekvn nmvlfdqaty dkllseapky
      121 klitpsilsd rmringslar kairelmarg sirlvsahss qqiytratnt
//
LOCUS       XP_016715673             493 aa            linear   PLN 06-AUG-2024
DEFINITION  3-ketoacyl-CoA synthase 9 [Gossypium hirsutum].
ACCESSION   XP_016715673
VERSION     XP_016715673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860184.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="3-ketoacyl-CoA synthase 9"
                     /calculated_mol_wt=55131
     Region          13..492
                     /region_name="PLN02377"
                     /note="3-ketoacyl-CoA synthase"
                     /db_xref="CDD:166018"
     CDS             1..493
                     /gene="LOC107928898"
                     /coded_by="XM_016860184.2:117..1598"
                     /db_xref="GeneID:107928898"
ORIGIN      
        1 mngeknssnn rvlklkyvkl gyhylithll klclvplmav iivqasrlsl ndihqtwlhl
       61 ehnlvyvvvl safvlvgstv yfmtrkrsvy lvdyacylpp sklkvehdrf mkhcklmgcf
      121 detslvfldk ilgrsglgee tcapeamhcl ppkpsmeaar qeteqvmfga ldtlfantnv
      181 kpkdvgilvv ncslfnptps lssmiinkyk mrgniksfnl ggmgcsasvi svdlakdmlq
      241 vhrnnyaivv stenitqnwy fgnnkamllp nclfriggaa vllsnksvdr rrskyklihv
      301 vrthcgannk afncvrqeqd digktgvsls kdlmtiagna lksnittlgp lvlpiseqil
      361 ffvtlvankl inakikpyip dfklafehfc ihaggravid eleknlhllp vhveasrmtl
      421 hrfgntssss iwyelaymea kgrmqkgdrv wqiafgsgfk cnsavwlalk nvkpscnspw
      481 egcihrypvq lsl
//
LOCUS       XP_016715622              81 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RADIALIS-like 2 [Gossypium hirsutum].
ACCESSION   XP_016715622
VERSION     XP_016715622.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860133.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..81
                     /product="protein RADIALIS-like 2"
                     /calculated_mol_wt=9189
     Region          9..56
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(10,43..44,46..47,49..51,53..55)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..81
                     /gene="LOC107928859"
                     /coded_by="XM_016860133.2:142..387"
                     /db_xref="GeneID:107928859"
ORIGIN      
        1 mssnsmsasw takqnkdfer alavydkdtp drwynvakav ggktveevkk hyellledvr
       61 hiesgrvpfp dywtvtgnrq a
//
LOCUS       XP_016715568             664 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016715568
VERSION     XP_016715568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860079.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="proline-rich receptor-like protein kinase PERK5
                     isoform X1"
                     /calculated_mol_wt=70550
     Region          322..590
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(322..325,328,330,342,344,373,389..392,440,444..445,
                     447,457..458)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..664
                     /gene="LOC107928805"
                     /coded_by="XM_016860079.2:195..2189"
                     /db_xref="GeneID:107928805"
ORIGIN      
        1 masspkgspp ssrvssppps agdkstappp vpassppnpp sappsppaes nspsppsyss
       61 tssssppstp allpptspst spsppstlss spsspsswts ptistsksps ssstrsstsp
      121 srkpssnnng nnqnnttvtn ptpsppplsp pslsspsssp pplpansple nslpnpsstp
      181 ilssppptsn sstnqientp kssnmpfsst lpiiigvpvs vglllglilm clnamrtkrk
      241 edlekhvqkg daekgignka nehavnilvs psgivskggs preeapsyfs pkyqsplgin
      301 kcsftyeela iatqgfsqkn llgqggfwfv hkgvlpngre vavkslksgs gqgqrefqae
      361 veiisrihhr hlvsfvgfsi agdkkmlvye flpnktlqfh lhekglptmd wptrlkialg
      421 aakglsylhe dchpriihrd iksanilldf cfeamvadfg lakltqdsnt hvstrvmgtf
      481 gylapeyvss gkltnksdvf sfgvvlleli tgrrpynpts nmdeslvdwa rplcaramed
      541 gnfgqlvdph lgnnfvdhem afmvscasac vrhsarqrpk mrqivcaled gvplddlset
      601 pkldqsstsn sksdntsnes ssytleskey gsnnnddtnh chlnpssfss dssettskar
      661 ddlk
//
LOCUS       XP_040942541             595 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942541
VERSION     XP_040942541.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086607.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..595
                     /product="proline-rich receptor-like protein kinase PERK5
                     isoform X2"
                     /calculated_mol_wt=63259
     Region          322..584
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(322..326,330,342,344,373,389..392,396,398,440,442,
                     444..445,447,458,461,478..481)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(322..326,330,342,344,373,389..392,396,440,442,
                     444..445,447,458)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(326,396,398,440,442,444,461,478..481)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(457..464,474..481)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..595
                     /gene="LOC107928805"
                     /coded_by="XM_041086607.1:234..2021"
                     /db_xref="GeneID:107928805"
ORIGIN      
        1 masspkgspp ssrvssppps agdkstappp vpassppnpp sappsppaes nspsppsyss
       61 tssssppstp allpptspst spsppstlss spsspsswts ptistsksps ssstrsstsp
      121 srkpssnnng nnqnnttvtn ptpsppplsp pslsspsssp pplpansple nslpnpsstp
      181 ilssppptsn sstnqientp kssnmpfsst lpiiigvpvs vglllglilm clnamrtkrk
      241 edlekhvqkg daekgignka nehavnilvs psgivskggs preeapsyfs pkyqsplgin
      301 kcsftyeela iatqgfsqkn llgqggfwfv hkgvlpngre vavkslksgs gqgqrefqae
      361 veiisrihhr hlvsfvgfsi agdkkmlvye flpnktlqfh lhekglptmd wptrlkialg
      421 aakglsylhe dchpriihrd iksanilldf cfeamvadfg lakltqdsnt hvstrvmgtf
      481 gylapeyvss gkltnksdvf sfgvvlleli tgrrpynpts nmdeslvdwa rplcaramed
      541 gnfgqlvdph lgnnfvdhem afmvscasac vrhsarqrpk mrqvcwsnee qstkf
//
LOCUS       XP_016715696             676 aa            linear   PLN 06-AUG-2024
DEFINITION  membralin-like protein At1g60995 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715696
VERSION     XP_016715696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860207.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..676
                     /product="membralin-like protein At1g60995 isoform X1"
                     /calculated_mol_wt=77138
     Region          <262..464
                     /region_name="Membralin"
                     /note="Tumour-associated protein; pfam09746"
                     /db_xref="CDD:462877"
     CDS             1..676
                     /gene="LOC107928917"
                     /coded_by="XM_016860207.2:160..2190"
                     /db_xref="GeneID:107928917"
ORIGIN      
        1 mdpeqtfmrv qgrfsqiltp rvrvaleyiy lfiaitsfci lvtmhanyvq qpgcsselsg
       61 idsnevqliq ikitsaglws rnesetvtvd ntelktaten vevasvvdeg lmfldakfwl
      121 nwfdsgarkg ksawkfwntd gdlikqhaes stngeiskpn idsvvakidn eetrngfsls
      181 akqtfkaavv hfgkkwyrrl sfiwrhavqi fasfhkllni tglhlnldvp kwlrilhfdk
      241 lnsyavhwle rrskafepty lyslekgyfl lpeaaksqhn irtvnislsa rhpcfgnrwq
      301 qllinrfvgy dtimmnsllh kpglgylynf qtkefynlsy aqelpgssar lgdylvtkcg
      361 vlmmsffvff tttmsvsftl retqtrmlkf tvqlqhharh rlptfqlifv hvieslvfvp
      421 imigilfflf efyddqllaf mvlilvwice lfilisvrtp ismkffprff slyflvfhiy
      481 ffsyaygfsy lalstaaafm qhlilyfwnr fevpavqrfm qnrrsqlqqh pdfhitssti
      541 lastlhirrl ntrnpglant dpssglgsrt vsdqampanv ageatgpqgn agnnnvgeiv
      601 dpvqisgqgq pelpqaeags npgtmssfss lllwilggas seglnsflsm frdvreqgrv
      661 ytnsprhedr atqnvq
//
LOCUS       XP_016715697             649 aa            linear   PLN 06-AUG-2024
DEFINITION  membralin-like protein At1g60995 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715697
VERSION     XP_016715697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..649
                     /product="membralin-like protein At1g60995 isoform X2"
                     /calculated_mol_wt=74236
     Region          7..437
                     /region_name="Membralin"
                     /note="Tumour-associated protein; pfam09746"
                     /db_xref="CDD:462877"
     CDS             1..649
                     /gene="LOC107928917"
                     /coded_by="XM_016860208.2:146..2095"
                     /db_xref="GeneID:107928917"
ORIGIN      
        1 mdpeqtfmrv qgrfsqiltp rvrvaleyiy lfiaitsfci lvtmhanyvq qpgcsselsg
       61 idsnevqliq ikitsaglws rnesetvtvd ntelktaten vevasvvdeg lmfldakfwl
      121 nwfdsgarkg ksawkfwntd gdlikqhaes stnakqtfka avvhfgkkwy rrlsfiwrha
      181 vqifasfhkl lnitglhlnl dvpkwlrilh fdklnsyavh wlerrskafe ptylyslekg
      241 yfllpeaaks qhnirtvnis lsarhpcfgn rwqqllinrf vgydtimmns llhkpglgyl
      301 ynfqtkefyn lsyaqelpgs sarlgdylvt kcgvlmmsff vfftttmsvs ftlretqtrm
      361 lkftvqlqhh arhrlptfql ifvhvieslv fvpimigilf flfefyddql lafmvlilvw
      421 icelfilisv rtpismkffp rffslyflvf hiyffsyayg fsylalstaa afmqhlilyf
      481 wnrfevpavq rfmqnrrsql qqhpdfhits stilastlhi rrlntrnpgl antdpssglg
      541 srtvsdqamp anvageatgp qgnagnnnvg eivdpvqisg qgqpelpqae agsnpgtmss
      601 fsslllwilg gasseglnsf lsmfrdvreq grvytnsprh edratqnvq
//
LOCUS       XP_016715618             402 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715618
VERSION     XP_016715618.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860129.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..402
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45464
     Region          46..391
                     /region_name="PRK14298"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:184612"
     Region          226..386
                     /region_name="DnaJ_C"
                     /note="C-terminal substrate binding domain of DnaJ and
                     HSP40; cd10747"
                     /db_xref="CDD:199909"
     Site            order(228,243..248,262,286)
                     /site_type="other"
                     /note="substrate binding site [polypeptide binding]"
                     /db_xref="CDD:199909"
     Site            order(323..324,327..328,349..352,382..386)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:199909"
     CDS             1..402
                     /gene="LOC107928856"
                     /coded_by="XM_016860129.2:506..1714"
                     /db_xref="GeneID:107928856"
ORIGIN      
        1 mgdhshshrr rrrldheddh dqdqdedhnh drhrsntsgi iglsckayks ivnkwcsdrn
       61 spkkeegkik dhddsskkgn kkeqedkskk gekhlkrekq nrlsadesmf srqfsflsks
      121 ssrrshtptp vptylskssi rtsnsplrfs lsrtfskkgr dedetpqkqq qkrsvsanra
      181 stlsrslsrk gnsetekpnl srstsqrstt piifshsiar rkplpvektl ectleelchg
      241 glkkinivkd viseermivk qeetltinvk pgwtkgtkvt fegkgdekpg ylpadiifti
      301 qekrhelfkr tgddleivve iplvkaltgc slsvpllgge tmsihvsevi ypgyekviqg
      361 qgmpnvkgdk rgdlritflv kfpaelsdeq rsetcsileg cc
//
LOCUS       XP_016715683             592 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane 9 superfamily member 1 [Gossypium hirsutum].
ACCESSION   XP_016715683
VERSION     XP_016715683.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715683.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..592
                     /product="transmembrane 9 superfamily member 1"
                     /calculated_mol_wt=67384
     Region          56..549
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..592
                     /gene="LOC107928906"
                     /coded_by="XM_016860194.2:170..1948"
                     /db_xref="GeneID:107928906"
ORIGIN      
        1 mssavfsavr sfsvfvfvll flslafases dhkyqpddpi tlwvnkvgpy nnpqetynyy
       61 slpfcqpgtn pahkwgglge vlggnelids qiymkfqknv drgticqlel deakvrqfkd
      121 aiensywfef fvddlplwgf vgelhpdrns engkhvlyth knivikynkd qiihvnltqe
      181 spkqleagrt ldmtysvkwl ptnvtfarrf diyldypffe hqihwfsvfn sfmmvifltg
      241 lvsmilmrtl rndyakyare dddletlerd vseecgwklv hgdvfrppsn lallsavvgt
      301 gaqlallvll villaivgtl yvgrgaivtt filcyaftsf isgyvsggmy srnggknwik
      361 smiltaslfp flcfgigfll ntvaifygsl aaipfgtmvv vfviwafisf plallgtvvg
      421 rnwsgapnnp crvktiprpi pekkwyltps vvsmmggllp fgsifiemyf vftsfwnykv
      481 yyvygfmllv fliliivtic vtivgtyfll naenyhwqwt sffsaastai yvylysvyyy
      541 svktkmsgff qtsfyfgytl mfclglgilc gaigflgsnl fvrriyrnik cd
//
LOCUS       XP_040942542             443 aa            linear   PLN 06-AUG-2024
DEFINITION  COBRA-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_040942542
VERSION     XP_040942542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086608.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..443
                     /product="COBRA-like protein 6"
                     /calculated_mol_wt=50050
     Region          57..217
                     /region_name="COBRA"
                     /note="COBRA-like protein; pfam04833"
                     /db_xref="CDD:461450"
     CDS             1..443
                     /gene="LOC121213686"
                     /coded_by="XM_041086608.1:110..1441"
                     /db_xref="GeneID:121213686"
ORIGIN      
        1 maqfyfgvqr svdmvfslis filisvspsn gydpldphgn itikwdllqs npdtndvrvs
       61 ifnfqlyrhi erpgwqlgwe wqgdeaimsm lgaeateqgn csrfkggenl phccekqpmi
      121 idllpeasfn mktsncckgg vlssmvqdps nyaaifvmki gavnssdgfk mpgnfsfgvs
      181 gytcgqpvrv ppsryswdsg rrwtqalgtw nitcmysqfv assspqccvs lsafynttiv
      241 pcpkcscsch askcvkfget ppvlqetrdw nqqlpalirc sshmcpirih whikqsykqy
      301 wrvkvtlnnr nilknysqwn leavhpnlkn ltqvfsfnye plnpyghind sgmfwgiryy
      361 ndmllqegen gyvqtemlmr kgedflsfrq gwgfptrvlf ngdecvmplp dqypalpnng
      421 gngpifslsl ivlsllvlti vcf
//
LOCUS       XP_040942543             342 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing transcription factor VRN1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942543
VERSION     XP_040942543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086609.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..342
                     /product="B3 domain-containing transcription factor VRN1
                     isoform X1"
                     /calculated_mol_wt=39164
     Region          5..96
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(7,10,18,21,23,51,60,62..63,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          243..337
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(247,250,258,261,263,290,299,301..302,304..305)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..342
                     /gene="LOC121213688"
                     /coded_by="XM_041086609.1:279..1307"
                     /db_xref="GeneID:121213688"
ORIGIN      
        1 mprpffhkli lsstlqdkkl ripdnfvkkf kdelsvaaal tvpdghvwrv girkgdnkvw
       61 fqegwpefld ryyirigyfl ifryegnsaf svsifnlyns einyqsnall gsqynhgksy
      121 pfdeleddec mssamqhlfg gsklnhcvnw sgevnlnaak sannqpirvk lrtsgsetpp
      181 pkkpgrkkqk fdpndqdlsv gheddsemry rfyesasark rtvtaeerer amnaakafep
      241 snpfcrvvlr psylyrgcim ylpscfaehl sgvsgfiklq lpdgkqwsvr clyrggkakf
      301 sqgwyeftve nnlgegdvcv fellrsrefv lkvtvfrvmd ga
//
LOCUS       XP_040942544             336 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing transcription factor VRN1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942544
VERSION     XP_040942544.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086610.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="B3 domain-containing transcription factor VRN1
                     isoform X2"
                     /calculated_mol_wt=38479
     Region          5..96
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(7,10,18,21,23,51,60,62..63,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          237..331
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(241,244,252,255,257,284,293,295..296,298..299)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..336
                     /gene="LOC121213688"
                     /coded_by="XM_041086610.1:279..1289"
                     /db_xref="GeneID:121213688"
ORIGIN      
        1 mprpffhkli lsstlqdkkl ripdnfvkkf kdelsvaaal tvpdghvwrv girkgdnkvw
       61 fqegwpefld ryyirigyfl ifryegnsaf svsifnlyns einyqsnall gsqynhgksy
      121 pfdeleddec mssamqhlfg gsklnhcvnw sgevnlnaak sannqpirgs etpppkkpgr
      181 kkqkfdpndq dlsvghedds emryrfyesa sarkrtvtae ereramnaak afepsnpfcr
      241 vvlrpsylyr gcimylpscf aehlsgvsgf iklqlpdgkq wsvrclyrgg kakfsqgwye
      301 ftvennlgeg dvcvfellrs refvlkvtvf rvmdga
//
LOCUS       XP_040942545             258 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM19 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942545
VERSION     XP_040942545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086611.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="B3 domain-containing protein REM19 isoform X3"
                     /calculated_mol_wt=29166
     Region          159..253
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(163,166,174,177,179,206,215,217..218,220..221)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..258
                     /gene="LOC121213688"
                     /coded_by="XM_041086611.1:254..1030"
                     /db_xref="GeneID:121213688"
ORIGIN      
        1 mprpffhkli lsstlqdkkl glgkvttsqy nhgksypfde leddecmssa mqhlfggskl
       61 nhcvnwsgev nlnaaksann qpirvklrts gsetpppkkp grkkqkfdpn dqdlsvghed
      121 dsemryrfye sasarkrtvt aeereramna akafepsnpf crvvlrpsyl yrgcimylps
      181 cfaehlsgvs gfiklqlpdg kqwsvrclyr ggkakfsqgw yeftvennlg egdvcvfell
      241 rsrefvlkvt vfrvmdga
//
LOCUS       XP_040942546             252 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM19 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942546
VERSION     XP_040942546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086612.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="B3 domain-containing protein REM19 isoform X4"
                     /calculated_mol_wt=28481
     Region          153..247
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(157,160,168,171,173,200,209,211..212,214..215)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..252
                     /gene="LOC121213688"
                     /coded_by="XM_041086612.1:255..1013"
                     /db_xref="GeneID:121213688"
ORIGIN      
        1 mprpffhkli lsstlqdkkl glgkvttsqy nhgksypfde leddecmssa mqhlfggskl
       61 nhcvnwsgev nlnaaksann qpirgsetpp pkkpgrkkqk fdpndqdlsv gheddsemry
      121 rfyesasark rtvtaeerer amnaakafep snpfcrvvlr psylyrgcim ylpscfaehl
      181 sgvsgfiklq lpdgkqwsvr clyrggkakf sqgwyeftve nnlgegdvcv fellrsrefv
      241 lkvtvfrvmd ga
//
LOCUS       XP_016715688             345 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DMR6-LIKE OXYGENASE 1 [Gossypium hirsutum].
ACCESSION   XP_016715688
VERSION     XP_016715688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..345
                     /product="protein DMR6-LIKE OXYGENASE 1"
                     /calculated_mol_wt=39498
     Region          1..344
                     /region_name="PLN02750"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:178351"
     CDS             1..345
                     /gene="LOC107928908"
                     /coded_by="XM_016860199.2:83..1120"
                     /db_xref="GeneID:107928908"
ORIGIN      
        1 mgevdqafiq siqhranldt ieiegiplin lslshttdin llvseignac knwgffqvin
       61 hgvplelldk ikvaakaffd qpmeekrkvk rdevnpmgyy esehtknvrd wkevfdflik
      121 dptflpaspe leddemrtls nqwpenppqf revcqeyare veklgyklle lialslglps
      181 nrfngyfedq lsrmrlnhyp pcpcpelalg vgrhkdagal tivaqddvgg lqvkrksdgv
      241 wvpvkptpna lvinvgdiiq vwsneayesv ehrvvvnser erfsipifff pshyvmvkpl
      301 eelvnegnpp kykpynfgkf nvarnrsnyk klevqniqis dfkii
//
LOCUS       XP_016715656             360 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase SRK2E isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715656
VERSION     XP_016715656.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860167.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..360
                     /product="serine/threonine-protein kinase SRK2E isoform
                     X1"
                     /calculated_mol_wt=40878
     Region          20..276
                     /region_name="STKc_SnRK2"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     2; cd14662"
                     /db_xref="CDD:271132"
     Site            order(27..31,35,48,50,78,94..97,101,103..104,106,139..140,
                     142,144..145,147,159..160,163,177..181,183,213..216)
                     /site_type="active"
                     /db_xref="CDD:271132"
     Site            order(27..30,35,48,50,78,94..97,101,144..145,147,159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271132"
     Site            order(101,103..104,106,140,142,144,163,177..181,183,
                     213..216)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271132"
     Site            order(159..170,174..181)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271132"
     CDS             1..360
                     /gene="LOC107928889"
                     /coded_by="XM_016860167.2:540..1622"
                     /db_xref="GeneID:107928889"
ORIGIN      
        1 mdrpamgagm dlpimhdsdr yelvkdigsg nfgvarlmrd khtdelvavk yiergekide
       61 nvqreiinhr slrhpniirf keviltpthl aivmeyaagg elfericnag rfsedearff
      121 fqqlisgvsy chsmqvchrd lklentlldg spaprlkicd fgyskssllh sqpkstvgtp
      181 ayiapevllk keydgkvadv wscgvtiyvm lvgaypfedp edprnfhkti hriihvqysi
      241 pdyvhislec rhlisrifva dpakrisipe iknhewflkn lpadlmdens mndqfeepdq
      301 pmqsvdeimq iiseatipat nmnnldsylt gsldpdddme dldndseldi dssgeliyam
//
LOCUS       XP_016715657             314 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase SRK2E isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016715657
VERSION     XP_016715657.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860168.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="serine/threonine-protein kinase SRK2E isoform
                     X2"
                     /calculated_mol_wt=35677
     Region          10..230
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..314
                     /gene="LOC107928889"
                     /coded_by="XM_016860168.2:670..1614"
                     /db_xref="GeneID:107928889"
ORIGIN      
        1 msslllsisr eidenvqrei inhrslrhpn iirfkevilt pthlaivmey aaggelferi
       61 cnagrfsede arfffqqlis gvsychsmqv chrdlklent lldgspaprl kicdfgysks
      121 sllhsqpkst vgtpayiape vllkkeydgk vadvwscgvt iyvmlvgayp fedpedprnf
      181 hktihriihv qysipdyvhi slecrhlisr ifvadpakri sipeiknhew flknlpadlm
      241 densmndqfe epdqpmqsvd eimqiiseat ipatnmnnld syltgsldpd ddmedldnds
      301 eldidssgel iyam
//
LOCUS       XP_016715658             348 aa            linear   PLN 06-AUG-2024
DEFINITION  flavanone 3-dioxygenase 2 [Gossypium hirsutum].
ACCESSION   XP_016715658
VERSION     XP_016715658.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860169.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715658.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..348
                     /product="flavanone 3-dioxygenase 2"
                     /calculated_mol_wt=39774
     Region          1..343
                     /region_name="PLN02750"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:178351"
     CDS             1..348
                     /gene="LOC107928890"
                     /coded_by="XM_016860169.2:152..1198"
                     /db_xref="GeneID:107928890"
ORIGIN      
        1 mggidqafvq epeqrpksst ievdgipvid msvsgtggie klaseignac rkwgffqvin
       61 hgvplelrqr vekvakaffd lpieekrkak rddlnftgyh deehtknvrd wkevfdmlie
      121 dptflpaspd pddeeirtys nkwpenppef retcqeycre veklafklle lislslglpa
      181 nrlsdffkhq tgmlrlnyyp pcpspelalg vgrhrdggal tvlaqddvgg lqirrqsdge
      241 wipikpipna yiiniadalq vwsndlyvsa ehrvvvnseq erfsiplfff pshyvkvapl
      301 delvneqnpa kykeyswgky yinrtgsnyk kleaenlqid hfktpese
//
LOCUS       XP_016715659             836 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g15820,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016715659
VERSION     XP_016715659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860170.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..836
                     /product="pentatricopeptide repeat-containing protein
                     At2g15820, chloroplastic"
                     /calculated_mol_wt=96414
     Region          228..253
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          259..291
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          339..370
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <360..539
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          381..406
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          412..440
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          448..475
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          481..510
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          551..580
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          632..781
                     /region_name="LAGLIDADG_2"
                     /note="LAGLIDADG DNA endonuclease family; pfam03161"
                     /db_xref="CDD:427174"
     CDS             1..836
                     /gene="LOC107928892"
                     /coded_by="XM_016860170.2:97..2607"
                     /db_xref="GeneID:107928892"
ORIGIN      
        1 mdvqqmmvaa nkaqcfvspp lstliitint pslnpntpsk tpmrtslsfl rlfrplsrpq
       61 tvlfrplipr yaaprfspff srhfsvssap fsasavgfvd ekereeeerw dfsnneteak
      121 fvfedndgvf adndmkhlva peievkelde lpeqwrrskl awlckelpah kagtlvriln
      181 aqrkwlkqed atylavhcmr irenetgfrv ykwmmqqhwy rfdfalatkl adymgkerkf
      241 tkcreifddi inqgrvpses tfhilivayl stpvqgclde acgiynrmiq lggyqprlsl
      301 hnslfralln rpggsskyyl kqaefifhnl etcgleiqke iytgliwlhs yqdtvdkeri
      361 kllrkmmres gmeegkevli silracskdg dveeaertwi kllgsndsip sqafvykmev
      421 yskvgeitks levfremkkc lgytsiasyh kiievlcese qmdlaesfmk eliesgmkpl
      481 mpsyikltdt ylrlnyhdkl estfleclek crpnrtiysi ylsslvkvgn lgkaeeifnh
      541 mgknvtigvn akscntilyg ylssgdnlka ekiydlmcqk kfeiesplme klesvlrssr
      601 kevkkpvslk lskeqreilm glllgglrid sdeerknhmi rfefnpssip hsilkrhihd
      661 qyhewlhpss kltagngdip hkfntishsy fgfyadqfwp kgqpvipkli hrwlspivla
      721 ywymyggyrt sagdillklk gssegvkkvv kalkskslnc rvkrkgrvfw igflrtdsmw
      781 fwklvepyvl ddlkdflkag setaddcave srdinfdsas dsdekgssdy seddnp
//
LOCUS       XP_016715773             467 aa            linear   PLN 06-AUG-2024
DEFINITION  armadillo repeat-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016715773
VERSION     XP_016715773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860284.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..467
                     /product="armadillo repeat-containing protein 6"
                     /calculated_mol_wt=49643
     Region          341..375
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(366,370,374,410,414,418,451,455,459)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          383..421
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          427..460
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..467
                     /gene="LOC107928968"
                     /coded_by="XM_016860284.2:178..1581"
                     /db_xref="GeneID:107928968"
ORIGIN      
        1 maptknvrti sqeafdelvk eniddlgmdp aealedaiqt lslqgvdlsg ivkcvpgegg
       61 ikdhpamqcl dklkqlnads kdqfggqdlv qitallndls elcisnkeds gnavivakng
      121 gielvclics kiptesrqcl vscfkamasl ltdvqstesf rasggpkivv gilsdgirdl
      181 dilksgftvv avaasgnevv kqslmdlrvd elilqvlsgq tqgsiqslyd airvlltsdd
      241 nrvvasevyg yarrfakigi akalvetlhg gisspslvsa sialkavavn deicksiada
      301 ggidvllkcv ddsgeqrnkt vartccslls klagsdsnks aivekggmdk liklsarfsd
      361 dpsvmqevma iisvlclrsp dnatraveag agdlaiqamq kfpaaqpmqr ssclmirnlv
      421 vrnpenrtll lnngidkfir kakenhesck daatdalrdl gldnyns
//
LOCUS       XP_016715559             213 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715559
VERSION     XP_016715559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860070.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..213
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X1"
                     /calculated_mol_wt=24133
     Region          26..80
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(29,32,44,46,49,52,68,71)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438215"
     CDS             1..213
                     /gene="LOC107928799"
                     /coded_by="XM_016860070.2:133..774"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 metddtdrkm eelggnkrls etppdddccp icfgpftvpc rsncghwycg scilqfwnys
       61 saskpcgcpm ctcmivnlmp easleqqpqn qevaevlksv rrynllflgg acgfiqqkvr
      121 elpffikrif qglmdpdtnd tyiaeirlfa mllsiiyrat pldfiptggi gigrvfdcsa
      181 iilililrlv giyrrrrlmq rvrrlaamel lqe
//
LOCUS       XP_016715560             212 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715560
VERSION     XP_016715560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X2"
                     /calculated_mol_wt=24005
     Region          26..80
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(29,32,44,46,49,52,68,71)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438215"
     CDS             1..212
                     /gene="LOC107928799"
                     /coded_by="XM_016860071.2:139..777"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 metddtdrkm eelggnkrls etppdddccp icfgpftvpc rsncghwycg scilqfwnys
       61 saskpcgcpm ctcmivnlmp easleqqpqn qevaevlksv rrynllflgg acgfiqkvre
      121 lpffikrifq glmdpdtndt yiaeirlfam llsiiyratp ldfiptggig igrvfdcsai
      181 ilililrlvg iyrrrrlmqr vrrlaamell qe
//
LOCUS       XP_016715561             202 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016715561
VERSION     XP_016715561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860072.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=22705
     Region          <39..69
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..202
                     /gene="LOC107928799"
                     /coded_by="XM_016860072.2:208..816"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 mmivaqfala pslflvdlia aigialvsff lvlfrflags cilqfwnyss askpcgcpmc
       61 tcmivnlmpe asleqqpqnq evaevlksvr rynllflgga cgfiqqkvre lpffikrifq
      121 glmdpdtndt yiaeirlfam llsiiyratp ldfiptggig igrvfdcsai ilililrlvg
      181 iyrrrrlmqr vrrlaamell qe
//
LOCUS       XP_040942547             201 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942547
VERSION     XP_040942547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086613.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X4"
                     /calculated_mol_wt=22577
     Region          <39..69
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..201
                     /gene="LOC107928799"
                     /coded_by="XM_041086613.1:135..740"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 mmivaqfala pslflvdlia aigialvsff lvlfrflags cilqfwnyss askpcgcpmc
       61 tcmivnlmpe asleqqpqnq evaevlksvr rynllflgga cgfiqkvrel pffikrifqg
      121 lmdpdtndty iaeirlfaml lsiiyratpl dfiptggigi grvfdcsaii lililrlvgi
      181 yrrrrlmqrv rrlaamellq e
//
LOCUS       XP_016715562             183 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016715562
VERSION     XP_016715562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860073.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..183
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X5"
                     /calculated_mol_wt=20568
     Region          26..80
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(29,32,44,46,49,52,68,71)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438215"
     CDS             1..183
                     /gene="LOC107928799"
                     /coded_by="XM_016860073.2:133..684"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 metddtdrkm eelggnkrls etppdddccp icfgpftvpc rsncghwycg scilqfwnys
       61 saskpcgcpm ctcmivnlmp easleqqpqn qevaevlksv rrynllflgg acgfiqqkvr
      121 elpffikrif qglmdpdtnd tyiaeirlfa mllsiiyrat pldfiptanc tnwcsffpvl
      181 qgg
//
LOCUS       XP_040942548             182 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040942548
VERSION     XP_040942548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086614.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X6"
                     /calculated_mol_wt=20440
     Region          26..80
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(29,32,44,46,49,52,68,71)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438215"
     CDS             1..182
                     /gene="LOC107928799"
                     /coded_by="XM_041086614.1:133..681"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 metddtdrkm eelggnkrls etppdddccp icfgpftvpc rsncghwycg scilqfwnys
       61 saskpcgcpm ctcmivnlmp easleqqpqn qevaevlksv rrynllflgg acgfiqkvre
      121 lpffikrifq glmdpdtndt yiaeirlfam llsiiyratp ldfiptanct nwcsffpvlq
      181 gg
//
LOCUS       XP_016715563             174 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_016715563
VERSION     XP_016715563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860074.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..174
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X7"
                     /calculated_mol_wt=19590
     Region          26..80
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(29,32,44,46,49,52,68,71)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438215"
     CDS             1..174
                     /gene="LOC107928799"
                     /coded_by="XM_016860074.2:133..657"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 metddtdrkm eelggnkrls etppdddccp icfgpftvpc rsncghwycg scilqfwnys
       61 saskpcgcpm ctcmivnlmp easleqqpqn qevaevlksv rrynllflgg acgfiqqkvr
      121 elpffikrif qglmdpdtnd tyiaeirlfa mllsiiyrat pldfiptddd lcsv
//
LOCUS       XP_040942549             173 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040942549
VERSION     XP_040942549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086615.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..173
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X8"
                     /calculated_mol_wt=19462
     Region          26..80
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(29,32,44,46,49,52,68,71)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..173
                     /gene="LOC107928799"
                     /coded_by="XM_041086615.1:133..654"
                     /db_xref="GeneID:107928799"
ORIGIN      
        1 metddtdrkm eelggnkrls etppdddccp icfgpftvpc rsncghwycg scilqfwnys
       61 saskpcgcpm ctcmivnlmp easleqqpqn qevaevlksv rrynllflgg acgfiqkvre
      121 lpffikrifq glmdpdtndt yiaeirlfam llsiiyratp ldfiptdddl csv
//
LOCUS       XP_040942550             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942550
VERSION     XP_040942550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086616.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36941
     Region          107..306
                     /region_name="DUF1645"
                     /note="Protein of unknown function (DUF1645); pfam07816"
                     /db_xref="CDD:429678"
     CDS             1..335
                     /gene="LOC121213689"
                     /coded_by="XM_041086616.1:63..1070"
                     /db_xref="GeneID:121213689"
ORIGIN      
        1 mevevvaplp ttefnfdssc sspyitapss pqrfggnllf staptspshd sslygelngl
       61 shvvgsspav pfgwepkqrn dddecnngcg dfefnfsgql ertslsadel faggkikplk
      121 pphlfeptae nhheppqakq eqrgrerksg fsfsssttss ssynynlihk ksrslspfrv
      181 tniildeqde cpsnfenpin fsstktpksy vssifsaisf qrgnkkwklr dlllfrsase
      241 gratnikepl rkysvlgkke vedvkhapss ttasskrrtp pvsahelhyt vnravaeemr
      301 rktflpykqg llgclgfnpg smheisrgvg sltrg
//
LOCUS       XP_016715624             193 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-dependent kinase inhibitor 7 [Gossypium hirsutum].
ACCESSION   XP_016715624
VERSION     XP_016715624.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860135.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="cyclin-dependent kinase inhibitor 7"
                     /calculated_mol_wt=21420
     Region          151..188
                     /region_name="CDI"
                     /note="Cyclin-dependent kinase inhibitor; pfam02234"
                     /db_xref="CDD:460503"
     CDS             1..193
                     /gene="LOC107928862"
                     /coded_by="XM_016860135.2:294..875"
                     /db_xref="GeneID:107928862"
ORIGIN      
        1 messrtsftl skrrktvdsk dlqelelpps sdiklgnsrr rflsdsgdkp iqvstssnfa
       61 gdmcsslgsg dgsssasrcv snescdtvkh ssrfvdlevk sfeteistci nntnkfstkt
      121 tptieligds eepphrntpp spspspppiq aeideffsva ekyeqvrflk kynydivkdv
      181 pldgryqwir lkp
//
LOCUS       XP_016715761             402 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715761
VERSION     XP_016715761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..402
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=45333
     Region          128..369
                     /region_name="DUF829"
                     /note="Eukaryotic protein of unknown function (DUF829);
                     pfam05705"
                     /db_xref="CDD:461719"
     CDS             1..402
                     /gene="LOC107928956"
                     /coded_by="XM_016860272.2:227..1435"
                     /db_xref="GeneID:107928956"
ORIGIN      
        1 mmggggsvyw grnqeeskqv kgivvifawv sihekhlkny ldfyssigwn slvsradfln
       61 vyyperamsl afvllnelle klkirtcpvv fvafsgspka cmykvfqiiq etgegrlnpe
      121 iqlirncvcg qiydsgpvdf asdlnarfal hpsirkmpvp sklvswiakg vasgldglyl
      181 trfesqrtey wetlyssvdl dapylilcse kddlapypvi rdftqclqdl gadveivkwn
      241 gsphlehykh ypiqykaava sflekttlvy srrirnlrem ngmhdeisel iyglqkaavd
      301 snqsfrrval gpsdhfflps sakyhnsres gslqderpis lpvqpsinal svlgqilfda
      361 cvpkniegwd irysgsskgq pfasarrrsp plgikcnrrs rl
//
LOCUS       XP_040942551             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942551
VERSION     XP_040942551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086617.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..399
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=44963
     Region          125..366
                     /region_name="DUF829"
                     /note="Eukaryotic protein of unknown function (DUF829);
                     pfam05705"
                     /db_xref="CDD:461719"
     CDS             1..399
                     /gene="LOC107928956"
                     /coded_by="XM_041086617.1:180..1379"
                     /db_xref="GeneID:107928956"
ORIGIN      
        1 mmggggsvyw grnqeeskqv kgivvifawv sihekhlkny ldfyssigwn slvsradfln
       61 vyyperamsl afvllnelle klkirtcpvv fvafsgspka cmykvfqiiq etgegrlnpl
      121 irncvcgqiy dsgpvdfasd lnarfalhps irkmpvpskl vswiakgvas gldglyltrf
      181 esqrteywet lyssvdldap ylilcsekdd lapypvirdf tqclqdlgad veivkwngsp
      241 hlehykhypi qykaavasfl ekttlvysrr irnlremngm hdeiseliyg lqkaavdsnq
      301 sfrrvalgps dhfflpssak yhnsresgsl qderpislpv qpsinalsvl gqilfdacvp
      361 kniegwdiry sgsskgqpfa sarrrspplg ikcnrrsrl
//
LOCUS       XP_016715572             634 aa            linear   PLN 06-AUG-2024
DEFINITION  probable quinone oxidoreductase [Gossypium hirsutum].
ACCESSION   XP_016715572
VERSION     XP_016715572.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860083.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715572.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..634
                     /product="probable quinone oxidoreductase"
                     /calculated_mol_wt=68914
     Region          9..254
                     /region_name="ADH_SDR_c_like"
                     /note="insect type alcohol dehydrogenase (ADH)-like,
                     classical (c) SDRs; cd05323"
                     /db_xref="CDD:187584"
     Site            order(13,15..18,37..39,71..74,99..102,125,153..155,168,
                     172,197..200,202..205)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187584"
     Site            order(119..120,123,127..128,131..132,135,138,156,159..161,
                     163..164,166..167,169..171,173..174,177..178,181..182,184,
                     199,246,253..254)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187584"
     Site            order(126,155,168,172)
                     /site_type="active"
                     /db_xref="CDD:187584"
     Region          289..622
                     /region_name="Mgc45594_like"
                     /note="Mgc45594 gene product and other MDR family members;
                     cd08250"
                     /db_xref="CDD:176212"
     Site            order(332..334,417,421,442,445..447,465..467,471,486,
                     508..509,530..534,536,563..565,610..611,613,615,617)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:176212"
     Site            order(523..524,526,530..532,550,551,553..564,567..568)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:176212"
     CDS             1..634
                     /gene="LOC107928806"
                     /coded_by="XM_016860083.2:76..1980"
                     /db_xref="GeneID:107928806"
ORIGIN      
        1 melkpglsal vtggasgigk alslalarkg lfvtivdfae ekgkevaclv ekensgfhek
       61 lefhsaifvk cdvtnprdit lafekhvatf ggldicinsa gignpvpfkd dqtdgtktwr
      121 htinvnlvav idctrlaikt mqaqqkpgvi invgssagly plflgpvysa skggvimftr
      181 sltpykrqgi rvnvlcpefv rtemgekmdp klislmggfv pmemvvkgaf elitdesrag
      241 sclwitnrrg leywptpaee akytvrssss srndmisfqa plgfrlphnf kklvvhtlsf
      301 hfrdsthiis aplklpleld qvllkviyag vnagdvnfsa gryfqgtkee issllpfdag
      361 feavgiiaai gdsvrnlkvg tpaalmsfgc yaefvkvpsk hilpiprpdp eivalltsgl
      421 tasvalekvg qmksgqvvlv taaaggtgqf avqlaklagn kvvatcggke karllkelgv
      481 drvidykaed vktalkefpk gvdivyesvg gnmfdlclda lairgrlivi glisqykrki
      541 gwtplnyprl ekllsksqnv sgfvlvqygh lwkehllrlf hlyssgklkv vidqkrfsgl
      601 hsvadaveyl hsgkstgkvv vcidrsfehq makl
//
LOCUS       XP_016715752             627 aa            linear   PLN 06-AUG-2024
DEFINITION  probable quinone oxidoreductase [Gossypium hirsutum].
ACCESSION   XP_016715752
VERSION     XP_016715752.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860263.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715752.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..627
                     /product="probable quinone oxidoreductase"
                     /calculated_mol_wt=68003
     Region          9..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,99..101,153..155,168,172,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(126,155,168,172)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          289..615
                     /region_name="Mgc45594_like"
                     /note="Mgc45594 gene product and other MDR family members;
                     cd08250"
                     /db_xref="CDD:176212"
     Site            order(332..334,409,413,434,437..439,457..459,463,478,
                     500..501,522..526,528,556..558,603..604,606,608,610)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:176212"
     Site            order(515..516,518,522..524,542..544,546..557,560..561)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:176212"
     CDS             1..627
                     /gene="LOC107928951"
                     /coded_by="XM_016860263.2:209..2092"
                     /db_xref="GeneID:107928951"
ORIGIN      
        1 melkpglsal itggasgigk alslalagkg lfvtivdfae ekgkevaclv ekensrfhek
       61 lefpsaifvk cdvtnprdis lafekhvaty ggldvcinsa ginnpvpfqn dqsdgaktwr
      121 htinvnlvav idctrlaikt mqalqkpgvi intgsyaglf pffldpiysg skggvvlftr
      181 sltpykregi rvnvlcpevv rtemgekldp kyvslmggfv pmelvvkgaf elitdesrag
      241 sclwisnrrg mvywpipsee akyslrssts srsnkisfqa plssqlpqnf kklvvhtwsq
      301 nfrdathiis aplrlplesd qvllkviyag vnagdvnfsa gryfqgtkkd pgfeavgiia
      361 aigdsvrnle vgtpaavmti gcyaefmkvp skqilpiprp dpevvallts gltasialee
      421 lgqmksgkvv lvtaaaggtg qfavqlakla gnkvvatcgg kekarllkef gvdrvidykt
      481 ediktafkef pkgvdivyec vggnmfdlcl dalairgrli vigmisqyqg kdgwkplnyp
      541 glvekllaks qtvagfvlth ysrlmqkhli rlfqlyssgk fkvvidpkrf sglhsvsdav
      601 ehlhsgkstg kvvvcmdpsf ehqmakl
//
LOCUS       XP_016715753             436 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein Os01g0234100 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715753
VERSION     XP_016715753.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860264.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..436
                     /product="B3 domain-containing protein Os01g0234100
                     isoform X1"
                     /calculated_mol_wt=49559
     Region          87..178
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(91,94,102,105,107,135,142,144..145,147..148)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          <324..420
                     /region_name="DUF724"
                     /note="Protein of unknown function (DUF724); pfam05266"
                     /db_xref="CDD:428400"
     CDS             1..436
                     /gene="LOC107928952"
                     /coded_by="XM_016860264.2:60..1370"
                     /db_xref="GeneID:107928952"
ORIGIN      
        1 mavspkqris slkqvsrgrg rppktklfrk kvpamtvnqi vsyekekaqc nkrkratyde
       61 vyengqtkla vmeraldiqa nlssefpsmi kymlpshvtg gfwlglpkhf clnhlpkedr
      121 mmvledeegk efqvkylvek iglsggwrgf siahkllegd vcvfhlvrps kfkvyivrkk
      181 csdevdvalg llklesstql vdngkelkic eisvgktedr napilyssni eptvdqsknn
      241 rvdlgsevsd gvrlsdsivn frevksfedf nilvnglvid sefskylqmk yyelccdqns
      301 flhenllegl ncklvagvia etiniadair aaklttphds fltwdktlrs feglgmkvgf
      361 lrarldklmn lltksrryke vkleqansne eklkleakla evthtltkld reirlfkqek
      421 addlealfre vangpw
//
LOCUS       XP_016715754             435 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein Os01g0234100 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016715754
VERSION     XP_016715754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860265.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..435
                     /product="B3 domain-containing protein Os01g0234100
                     isoform X2"
                     /calculated_mol_wt=49431
     Region          86..177
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(90,93,101,104,106,134,141,143..144,146..147)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          <323..419
                     /region_name="DUF724"
                     /note="Protein of unknown function (DUF724); pfam05266"
                     /db_xref="CDD:428400"
     CDS             1..435
                     /gene="LOC107928952"
                     /coded_by="XM_016860265.2:77..1384"
                     /db_xref="GeneID:107928952"
ORIGIN      
        1 mavspkqris slkvsrgrgr ppktklfrkk vpamtvnqiv syekekaqcn krkratydev
       61 yengqtklav meraldiqan lssefpsmik ymlpshvtgg fwlglpkhfc lnhlpkedrm
      121 mvledeegke fqvkylveki glsggwrgfs iahkllegdv cvfhlvrpsk fkvyivrkkc
      181 sdevdvalgl lklesstqlv dngkelkice isvgktedrn apilyssnie ptvdqsknnr
      241 vdlgsevsdg vrlsdsivnf revksfedfn ilvnglvids efskylqmky yelccdqnsf
      301 lhenllegln cklvagviae tiniadaira aklttphdsf ltwdktlrsf eglgmkvgfl
      361 rarldklmnl ltksrrykev kleqansnee klkleaklae vthtltkldr eirlfkqeka
      421 ddlealfrev angpw
//
LOCUS       XP_016715755             410 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein Os01g0234100 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016715755
VERSION     XP_016715755.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860266.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..410
                     /product="B3 domain-containing protein Os01g0234100
                     isoform X3"
                     /calculated_mol_wt=46597
     Region          61..152
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(65,68,76,79,81,109,116,118..119,121..122)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          <298..394
                     /region_name="DUF724"
                     /note="Protein of unknown function (DUF724); pfam05266"
                     /db_xref="CDD:428400"
     CDS             1..410
                     /gene="LOC107928952"
                     /coded_by="XM_016860266.2:85..1317"
                     /db_xref="GeneID:107928952"
ORIGIN      
        1 mavspkqris slkivsyeke kaqcnkrkra tydevyengq tklavmeral diqanlssef
       61 psmikymlps hvtggfwlgl pkhfclnhlp kedrmmvled eegkefqvky lvekiglsgg
      121 wrgfsiahkl legdvcvfhl vrpskfkvyi vrkkcsdevd valgllkles stqlvdngke
      181 lkiceisvgk tedrnapily ssnieptvdq sknnrvdlgs evsdgvrlsd sivnfrevks
      241 fedfnilvng lvidsefsky lqmkyyelcc dqnsflhenl leglncklva gviaetinia
      301 dairaakltt phdsfltwdk tlrsfeglgm kvgflrarld klmnlltksr rykevkleqa
      361 nsneeklkle aklaevthtl tkldreirlf kqekaddlea lfrevangpw
//
LOCUS       XP_016715627             519 aa            linear   PLN 06-AUG-2024
DEFINITION  putative leucine-rich repeat receptor-like serine/threonine-protein
            kinase At2g14440 [Gossypium hirsutum].
ACCESSION   XP_016715627
VERSION     XP_016715627.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860138.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715627.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="putative leucine-rich repeat receptor-like
                     serine/threonine-protein kinase At2g14440"
                     /calculated_mol_wt=56579
     Region          34..357
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          <411..>517
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          415..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          436..458
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          459..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..519
                     /gene="LOC107928866"
                     /coded_by="XM_016860138.2:109..1668"
                     /db_xref="GeneID:107928866"
ORIGIN      
        1 mpftnmslpi fllwlvsipf lahsapsqpr gtlvscgsst kqsipdtsls yipddgfinv
       61 gnkttlesnd llpilstlry fpqksarkyc ytfqvirggk ylvrtiyfyg gfdggkqppv
      121 fdqiiggtkw svvnttedya ngmssyyeii igahaktlsv cvarsnqtaa nsspfisaie
      181 vlsledsmyn stdfrtealv avarsafgne dsisfpddpy yrlwqpftdk nevvstqtsv
      241 sssdfwnkpp ekafskaiaa gvgkkleiqw psgslqstry yvslyfqdnr aasanswrvf
      301 svavngktfy nnlnvstggv tiysaewpla gptkitltpd skssagplin agevyqilpf
      361 gtrtlakdva vmeelarnld nppldwvgdp clpqenswtg vscsikdtva riisldltna
      421 gisgtlplti dnlstlhhlw lggnkfsgsi pemnsllkle tlhlennnft geipqslgkl
      481 pslrevllqn nnldgsvpdq laakqglklq vspgnhlsk
//
LOCUS       XP_016715581             171 aa            linear   PLN 06-AUG-2024
DEFINITION  EKC/KEOPS complex subunit TPRKB [Gossypium hirsutum].
ACCESSION   XP_016715581
VERSION     XP_016715581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860092.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="EKC/KEOPS complex subunit TPRKB"
                     /calculated_mol_wt=18571
     Region          16..169
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..171
                     /gene="LOC107928815"
                     /coded_by="XM_016860092.2:180..695"
                     /db_xref="GeneID:107928815"
ORIGIN      
        1 mkvfeingnt lslalfadvt nskelldsmq agtldpevaf lnasliadvf pvlaavhktl
       61 isksresltt rtlhselvyn ysgskhites lkrcgisess ryvlaarfna spdemkavek
      121 lingkeidld efegradqaq iqkhykisgp elgistlada itcriaarda l
//
LOCUS       XP_016715660             626 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CYPRO4 [Gossypium hirsutum].
ACCESSION   XP_016715660
VERSION     XP_016715660.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860171.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715660.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..626
                     /product="protein CYPRO4"
                     /calculated_mol_wt=69522
     Region          298..621
                     /region_name="VID27"
                     /note="VID27 C-terminal WD40-like domain; pfam08553"
                     /db_xref="CDD:430070"
     CDS             1..626
                     /gene="LOC107928893"
                     /coded_by="XM_016860171.2:108..1988"
                     /db_xref="GeneID:107928893"
ORIGIN      
        1 mgtaqsredr itdsesdegy eeeeeeeeeq yddalsdhqn tqsssststs sgtqkslddi
       61 daklkslklk ynsqqsshnl knpvklylhi ggntpkakwv isekltsysf tkengdnden
      121 cwflevgakv rvrvstemql kmfgdqkrvd fvdkavwalk flsdeeyrnf vtqfqnclfe
      181 nvygmeasee nkvkvcgkef igwmkpevad dsmwedaddl ssgsipvkgn relmeefeea
      241 anggvqslal galdnsflvn dlgvqvyrnf nrgihgkgic vkfdaggsri ggspssstpk
      301 kallmraern mmlmspeneg kpnatglkqv dietgkivte wkfekdgadv tmrditndtk
      361 gsqldpsest flglddnrlc qwdmrdrkgv vqniatsdsp vlhwsqghqf srgtnfqcfa
      421 stgdgsivvg sldgkirlys ktsmrqakta fpglgspith vdvtydgkwv lgttdtylvl
      481 ictlftdkdg ktktgfsgrm gnkipaprll kltpldshla gnnnkfhggh fswvtengkq
      541 erhlvatvgk fsviwdfqqv knsahecyrn qqglkscycy kivlkdesiv esrfmhdnfa
      601 vsnspeaplv vatpmkvssi slsgrg
//
LOCUS       XP_040942552             512 aa            linear   PLN 06-AUG-2024
DEFINITION  glycoprotein 3-alpha-L-fucosyltransferase A [Gossypium hirsutum].
ACCESSION   XP_040942552
VERSION     XP_040942552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086618.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="glycoprotein 3-alpha-L-fucosyltransferase A"
                     /calculated_mol_wt=58231
     Region          217..384
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..512
                     /gene="LOC107928817"
                     /coded_by="XM_041086618.1:292..1830"
                     /db_xref="GeneID:107928817"
ORIGIN      
        1 mpnlrgsrah eglpisdasp isvsnkkrws tlmpwliala viaqlaflgr lgnaknatff
       61 hswpelfrtq hsssgvkvag vrnsgirglg ghrnsgvetc eewleredtl vysrdfnkdp
      121 iwilisgdke dfkscavncs frsnwsrkad atfklpkksk aprvhrsmes asyyeennit
      181 qarrdgfeiv mttslssdvp vgyfswaeyd imapvipkse kalaaafisn cmasnfrlea
      241 lmelekenik idsygrchkn rdervdkvei lkrykfslaf ensneedyvt ekffqslvag
      301 svpvvigapn iedfapssds ylhikdlkdv rsiaeqmkyl agnpdaynrl lrwkqegptd
      361 tfkalvdmaa vhsscrlcih iattiwekee kdsdakkrpc kcnkgsetvy hlyvrergrf
      421 emdsiflrsg nmtlkaleva vlthfkfrkh vpiwkperpe slrggdelkv hriyplgltq
      481 rqalytfkfk gdadlknhie nnpcakfevi fv
//
LOCUS       XP_040942553             242 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-regulated protein 28 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942553
VERSION     XP_040942553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086619.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..242
                     /product="cold-regulated protein 28 isoform X1"
                     /calculated_mol_wt=26550
     CDS             1..242
                     /gene="LOC107928826"
                     /coded_by="XM_041086619.1:118..846"
                     /db_xref="GeneID:107928826"
ORIGIN      
        1 mghnlrrnfp vpvpssdpll drlneftqln sdssssgvti esfrdptana tpqgqtmvwt
       61 nekhnsylef letsfaeqlh ysmrsrgcyp reemwepcpa pqlpakfsvl qdgcylksnd
      121 pllnstadss dilanplhys tsaaksssat fpfsrktavp nvricsrsnt nlgacttevs
      181 dqnfvdeklr ektscfsgak rlkmmpmlda ssngqvsplg klnsaddsii shtsakrgtk
      241 kk
//
LOCUS       XP_016715592             241 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-regulated protein 28 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715592
VERSION     XP_016715592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..241
                     /product="cold-regulated protein 28 isoform X2"
                     /calculated_mol_wt=26422
     CDS             1..241
                     /gene="LOC107928826"
                     /coded_by="XM_016860103.2:118..843"
                     /db_xref="GeneID:107928826"
ORIGIN      
        1 mghnlrrnfp vpvpssdpll drlneftqln sdssssgvti esfrdptana tpgqtmvwtn
       61 ekhnsylefl etsfaeqlhy smrsrgcypr eemwepcpap qlpakfsvlq dgcylksndp
      121 llnstadssd ilanplhyst saaksssatf pfsrktavpn vricsrsntn lgacttevsd
      181 qnfvdeklre ktscfsgakr lkmmpmldas sngqvsplgk lnsaddsiis htsakrgtkk
      241 k
//
LOCUS       XP_040942554             220 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-regulated protein 28 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942554
VERSION     XP_040942554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086620.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="cold-regulated protein 28 isoform X3"
                     /calculated_mol_wt=24443
     CDS             1..220
                     /gene="LOC107928826"
                     /coded_by="XM_041086620.1:118..780"
                     /db_xref="GeneID:107928826"
ORIGIN      
        1 mghnlrrnfp vpvpssdpll drlneftqln sdssssgvti esfrdptana tpqgqtmvwt
       61 nekhnsylef letsfaeqlh ysmrsrgcyp reemwepcpa pqlpakfsvl qdgcylksnd
      121 pllnstadss dilanplhys tsaaksssat fpfsrktavp nvricsrsnt nlgacttevs
      181 dqnfvdeklr ektscfsgak rlkmmpmlda ssngqvrfrr
//
LOCUS       XP_016715546             145 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S16-like [Gossypium hirsutum].
ACCESSION   XP_016715546
VERSION     XP_016715546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860057.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="40S ribosomal protein S16-like"
                     /calculated_mol_wt=16287
     Region          5..145
                     /region_name="PLN00210"
                     /note="40S ribosomal protein S16; Provisional"
                     /db_xref="CDD:177799"
     CDS             1..145
                     /gene="LOC107928791"
                     /coded_by="XM_016860057.2:206..643"
                     /db_xref="GeneID:107928791"
ORIGIN      
        1 maekavesvq cfgrkktava vthckrgrgl ikingcpiel vepeilrfka vepilllgrh
       61 rfagvdmrir vkggghtsqi yairqsiaka lvafyqkyvd eqskkdikdv lvtydrtllv
      121 adprrcepkk fggrgararf qksyr
//
LOCUS       XP_040942555             576 aa            linear   PLN 06-AUG-2024
DEFINITION  putative NAC domain-containing protein 94 [Gossypium hirsutum].
ACCESSION   XP_040942555
VERSION     XP_040942555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086621.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..576
                     /product="putative NAC domain-containing protein 94"
                     /calculated_mol_wt=63198
     Region          220..344
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..576
                     /gene="LOC121213690"
                     /coded_by="XM_041086621.1:95..1825"
                     /db_xref="GeneID:121213690"
ORIGIN      
        1 mqnkeqnfsa aanggattse ghqvvtmaan ienqndisnp siasnmdatv leggeivtta
       61 enedynnrli ysaatdggai ayedselatm medifnqnst lscfaaadgg atayevgqff
      121 tqeediynln svlnstvasn idvtafeggq fftqeenfyd qinvlsstva sniettafeg
      181 getvttaena nnrnnilnss tasnggrtva evkdyiqsfp pgvrfvptde eliqyyllkk
      241 vnnellpsnl iwevdlygte pakltesyep ngesewyfft srrkkypngg rpdrstengf
      301 wkptgmdksi pegdlkpigs kktlefhtgr hpsghktewk mheykvdpsl ikpqnkpqdg
      361 mtldtcvlck vyktqrkgqn enyiesfdqn tntssssqif dagasseatn vsypmtgfag
      421 qpdselyplt tspmpnyeyy sntwfqptvd galnneafvp apnrnntvfr nrnsdttwpp
      481 yhpyysngll lhrgvnngas tstmagnyid nnvralqvrp pnaaltqltv nnggpnseah
      541 smaasrsntm srgrgeaqrg srrggnrgki imlprg
//
LOCUS       XP_016715764             515 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g06744 [Gossypium hirsutum].
ACCESSION   XP_016715764
VERSION     XP_016715764.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715764.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..515
                     /product="uncharacterized protein At4g06744"
                     /calculated_mol_wt=56570
     Region          159..>419
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          242..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          266..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..312
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          313..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..359
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..430
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..515
                     /gene="LOC107928958"
                     /coded_by="XM_016860275.2:194..1741"
                     /db_xref="GeneID:107928958"
ORIGIN      
        1 mgnlslsilv liaifgscws revvsdnddg glypfigtnr etleiiiggg ggeapapspe
       61 dcpppppepe cpppaspppp pppppppppp qirkpkpkpk pkpkpkptpk pppkppprpp
      121 skcgyrssnl cfenellats ygviqkfkkl ikpdengkry tktwngpnvc kykgfncdvr
      181 pdvkkkavaa vdfngaklsg ingslplhdf idgltdlaif hansnnftgt vpfigtskik
      241 ylyeldlsnn kitddfpmev lratqltfld irfnrikgvv patvfkldld vlfinnnnfr
      301 qrlpenlgdt palyitfann kftgrippsi gkaknllevl flnneltgcl pyeigylqna
      361 tvfdvgmnkl tgpiphsfgc lkkmeqlnla gnefygevpe ivcrlsnlqn lslssnyftq
      421 vgpacrdlvm kkklnvknnc ildlpeqrsk adcamffsrk licdrtesfk wipcmagkng
      481 fhsnsteese kkestgsgfs spsattygvl kphrl
//
LOCUS       XP_016715712             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715712
VERSION     XP_016715712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860223.2:310..1998"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715713             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715713
VERSION     XP_016715713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860224.2:227..1915"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715715             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715715
VERSION     XP_016715715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860226.2:221..1909"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715714             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715714
VERSION     XP_016715714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860225.2:265..1953"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_040942556             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942556
VERSION     XP_040942556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086622.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_041086622.1:172..1860"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715716             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715716
VERSION     XP_016715716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860227.2:264..1952"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715717             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715717
VERSION     XP_016715717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860228.2:172..1860"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715718             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715718
VERSION     XP_016715718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860229.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860229.2:170..1858"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_016715719             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715719
VERSION     XP_016715719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X1"
                     /calculated_mol_wt=61949
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..562
                     /gene="LOC107928925"
                     /coded_by="XM_016860230.2:138..1826"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd krklpspgfq veivlvdysg taptksqset ptnkqdessg tsesadgats
      481 kskttnsdqv aslvkstekv sigstdtqht haineprkdt vqqaadaada rvsisssesq
      541 fkamaadasv fsfgdeedfd se
//
LOCUS       XP_040942557             458 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            protein-tyrosine-phosphatase PTEN2A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942557
VERSION     XP_040942557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086623.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..458
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and protein-tyrosine-phosphatase PTEN2A
                     isoform X2"
                     /calculated_mol_wt=51282
     Region          145..309
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     CDS             1..458
                     /gene="LOC107928925"
                     /coded_by="XM_041086623.1:229..1605"
                     /db_xref="GeneID:107928925"
ORIGIN      
        1 mdngptdsss spaaeasdvq lpaatdlgqq slthdspskl sswaknlkip qpfaasqeds
       61 ltetagkspl arftsgiglr sspksppand snegnspttq pgflgtitng ivntsknavk
      121 avqvkarhvv sqnkrrfqeg gfdldmtyit eniiamgfpa gdmssgffgy vegfyrnhme
      181 evirffetyh kdkykvynlc serlydaslf egkvasfpfd dhncppirli isfcqsaysw
      241 lkedienvvv vhckagmart glmissllly lkffptaees idyynqkrcv dgkglvlpsq
      301 iryvkyfert liyfngenqp grrcilrgfr lhhcpywirp sitvsdhngv lfstkkhprt
      361 kdlspedfwf sapkkgvmvf alpgesglte lagdfkvhfn drqgdfycwl nttmienrki
      421 lstgdldgfd kdflgelgil kwlrkkeraw nehgcgna
//
LOCUS       XP_016715706             267 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclase-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016715706
VERSION     XP_016715706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860217.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..267
                     /product="cyclase-like protein 3"
                     /calculated_mol_wt=29264
     Region          51..267
                     /region_name="COG1878"
                     /note="Kynurenine formamidase [Amino acid transport and
                     metabolism]"
                     /db_xref="CDD:441482"
     CDS             1..267
                     /gene="LOC107928920"
                     /coded_by="XM_016860217.2:147..950"
                     /db_xref="GeneID:107928920"
ORIGIN      
        1 msslflllls taitaavasi paypsvstdc tvsaeddnpv pvrrevygdg rifdvshryt
       61 vdmpswgskd glgqflwlps smkngsrsnn slmklqsvhs gthvdapghm vdsyfdagfd
      121 vdtldldvln gpallvdvpr dsnitakvme slnipkgvrr vlfrtlntdr rlmfkkefds
      181 syvgfttdga rwlakntdik lvgidflsaa cydhsvpahl effegreiil veglkldnvp
      241 vgiynvhclp lrllgsegsp ircilik
//
LOCUS       XP_016715708             240 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat extensin-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016715708
VERSION     XP_016715708.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860219.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..240
                     /product="leucine-rich repeat extensin-like protein 3"
                     /calculated_mol_wt=26268
     Region          11..108
                     /region_name="C2"
                     /note="C2 domain; cd00030"
                     /db_xref="CDD:175973"
     Region          132..>169
                     /region_name="FAP"
                     /note="Fibronectin-attachment protein (FAP); pfam07174"
                     /db_xref="CDD:429334"
     CDS             1..240
                     /gene="LOC107928921"
                     /coded_by="XM_016860219.2:516..1238"
                     /db_xref="GeneID:107928921"
ORIGIN      
        1 msvsgihghv levtvvgcnr lkdtewlsrq dpyvcleygs tkyrtrtctd ggkapvfqer
       61 ftftlieglr einvvvwnsn tltyddfigs gkiqlqkvls qgfddtawsl qtktgryage
      121 vrlimhygna kpptttyapt apqytappph vpqysappat ypasypppat typspspypa
      181 ypssaypppp sayppphsay ppppsayppp pssyppstyp qqspyyppgp fpghyppppy
//
LOCUS       XP_016715566             263 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclase-like protein 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715566
VERSION     XP_016715566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860077.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..263
                     /product="cyclase-like protein 2 isoform X1"
                     /calculated_mol_wt=29352
     Region          48..263
                     /region_name="COG1878"
                     /note="Kynurenine formamidase [Amino acid transport and
                     metabolism]"
                     /db_xref="CDD:441482"
     CDS             1..263
                     /gene="LOC107928802"
                     /coded_by="XM_016860077.2:144..935"
                     /db_xref="GeneID:107928802"
ORIGIN      
        1 mtktmflpll llhlstaaas tsvstectvs tmddypvpvr revygdgrif dishrytmdm
       61 pswerkdglg rflwlpasmk ngslannslm klpthsgthv dapghmidry fdagfdvdtl
      121 dlevlngpal lvdvprdsni takvmeslki pkgvrrvlfr tlntdrrlmf kseydssyvg
      181 fttegarwlv kntdiklvgv dflsvacedh mvsahleffe sreiilvegl klddvptgiy
      241 nvhclplrll gaegspirci lik
//
LOCUS       XP_016715567             243 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclase-like protein 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715567
VERSION     XP_016715567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="cyclase-like protein 2 isoform X2"
                     /calculated_mol_wt=27423
     Region          48..>217
                     /region_name="COG1878"
                     /note="Kynurenine formamidase [Amino acid transport and
                     metabolism]"
                     /db_xref="CDD:441482"
     CDS             1..243
                     /gene="LOC107928802"
                     /coded_by="XM_016860078.2:144..875"
                     /db_xref="GeneID:107928802"
ORIGIN      
        1 mtktmflpll llhlstaaas tsvstectvs tmddypvpvr revygdgrif dishrytmdm
       61 pswerkdglg rflwlpasmk ngslannslm klpthsgthv dapghmidry fdagfdvdtl
      121 dlevlngpal lvdvprdsni takvmeslki pkgvrrvlfr tlntdrrlmf kseydssyvg
      181 fttegarwlv kntdiklvgv dflsvacedh mvsahleffe srenvrssal kyiifrfmlv
      241 kkl
//
LOCUS       XP_040942558             382 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase EFR [Gossypium
            hirsutum].
ACCESSION   XP_040942558
VERSION     XP_040942558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086624.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..382
                     /product="LRR receptor-like serine/threonine-protein
                     kinase EFR"
                     /calculated_mol_wt=41467
     Region          <90..>354
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          175..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          294..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..336
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..382
                     /gene="LOC107928836"
                     /coded_by="XM_041086624.1:103..1251"
                     /db_xref="GeneID:107928836"
ORIGIN      
        1 mfnlvhfllf vlhhllqaqa ltlpqdisal kafkssikqs sipswsclas wdfsddpcav
       61 phhtrficgv scspdatrit qitldpigys gqltplisql tqlttldlsd nyffgripss
      121 isslrnlqtl tltsnsfsgs ipdsvtalks letldlshna lsgklpksln sltslkrldl
      181 synkltgfls klplnllela lkanslsgyv skstfdgltr levvelndns fsgtlgawff
      241 llpslqqvdl annsfthvei skpaggnsdl vavnlgfnki egnlpanfad ypmlsslslr
      301 ynrlrgaipl gyskkkslrr lfldgnflig tppteffagd tevtgslgdn clrgcpansq
      361 lcspqqksya ickraysgkp rs
//
LOCUS       XP_016715692             274 aa            linear   PLN 06-AUG-2024
DEFINITION  probable carbohydrate esterase At4g34215 [Gossypium hirsutum].
ACCESSION   XP_016715692
VERSION     XP_016715692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="probable carbohydrate esterase At4g34215"
                     /calculated_mol_wt=30012
     Region          20..250
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     CDS             1..274
                     /gene="LOC107928912"
                     /coded_by="XM_016860203.2:212..1036"
                     /db_xref="GeneID:107928912"
ORIGIN      
        1 meetkipvte qnqfpqtpeh ifilsgqsnm agrggvhhhh wdgvvpldsk phasiirlsa
       61 nlhweparep lhhdidvrka cgvgpgmsfa navkdhiggg geclglvpca vggtaikewe
      121 rgqhlydnml krskesvekt kgeikallwy qgesdtpsyh taeaykenme rlihnvredl
      181 glpslpiiqv aiasgderym ekvreaqlgi dlpnvicvda kglalkednl hltteaqvkl
      241 ghmladaflt hfnappsqss pcsapknrvi sisk
//
LOCUS       XP_016715591             242 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB73 [Gossypium hirsutum].
ACCESSION   XP_016715591
VERSION     XP_016715591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860102.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..242
                     /product="transcription factor MYB73"
                     /calculated_mol_wt=27151
     Region          9..>150
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..242
                     /gene="LOC107928825"
                     /coded_by="XM_016860102.2:930..1658"
                     /db_xref="GeneID:107928825"
ORIGIN      
        1 mgqdidrvrg pwspeedell rklvqrygpr nwtvistsip grsgkscrlr wcnqlspeve
       61 hraftaeedr iirkahalyg nkwatiarll ngrtdnavkn hwnstlkrkf iedsesekkp
      121 aksqrtasss spsrsdandl glgvvadels qcsrvstklt lrsswnesvd lnndddhlsk
      181 endlkltaek hendssatva aamlppeila aikemikkev rdymeefgfk sesvknavgn
      241 ie
//
LOCUS       XP_016715765             479 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA pseudouridine synthase 4, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016715765
VERSION     XP_016715765.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860276.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715765.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..479
                     /product="RNA pseudouridine synthase 4, mitochondrial"
                     /calculated_mol_wt=54037
     Region          189..475
                     /region_name="RluA"
                     /note="Pseudouridine synthase RluA, 23S rRNA- or
                     tRNA-specific [Translation, ribosomal structure and
                     biogenesis]; COG0564"
                     /db_xref="CDD:440330"
     CDS             1..479
                     /gene="LOC107928960"
                     /coded_by="XM_016860276.2:71..1510"
                     /db_xref="GeneID:107928960"
ORIGIN      
        1 mlvganllrr llrsqlsadd ggtgfiitai yhlrphcstt tefsdegnse kkkeskwftl
       61 ppfaktvnas elgaklarkn hlksatsaet sayettalkw vlkccpelpr nlvqklfrlr
      121 qvrresiame vtddgcqvqk iqlkrvgakd slnigdkifl pisvcevpee khehdctdee
      181 snfirslely kdtaiivlnk ppgmpvqggi gikwsldela aawlrydyse sprlvhrldr
      241 dcsgilvmgr tqmsaailhs vfreetlgas khdsdnekrv lqkrywalvi gsprrpkgti
      301 saplrkvvvd dgksdritvf ehnntilssq haiteyrvik tsthgftwle lspltgrkhq
      361 lrvhcaevlg tpivgdykyg wqahrrlqnl aesdlrknsn ekvakenmlp fglnmdsgsi
      421 sekhlrlhlh cremilpnvs qvlrnpksft dddlsklksl eivaplpsym qkswdilns
//
LOCUS       XP_040942559             288 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-50 homolog isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942559
VERSION     XP_040942559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086625.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="protein unc-50 homolog isoform X1"
                     /calculated_mol_wt=33335
     Region          57..284
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..288
                     /gene="LOC107928961"
                     /coded_by="XM_041086625.1:55..921"
                     /db_xref="GeneID:107928961"
ORIGIN      
        1 msarlaywss flrfrllifk snsksnsykn ssnmsptvsk trssisisrp namfpqylrr
       61 ivkwqqmdie ytfwqmlhlc tapkiayqht kyhkqtknqw arddpafvvi cslllalatv
      121 aycaaydhsa ahavsvvisv llfhfllagi llatccwflt naylreeapn tcvveqrvew
      181 qvwlyafdvh cnsffpmfvm lyvihyflsp llvahgfipa llsnllfmva asyhhylnfl
      241 gydvlpfler ttfflypigi viilspilil sgfnpsryfm niyfsrtl
//
LOCUS       XP_040942560             288 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-50 homolog isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942560
VERSION     XP_040942560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086626.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="protein unc-50 homolog isoform X1"
                     /calculated_mol_wt=33335
     Region          57..284
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..288
                     /gene="LOC107928961"
                     /coded_by="XM_041086626.1:55..921"
                     /db_xref="GeneID:107928961"
ORIGIN      
        1 msarlaywss flrfrllifk snsksnsykn ssnmsptvsk trssisisrp namfpqylrr
       61 ivkwqqmdie ytfwqmlhlc tapkiayqht kyhkqtknqw arddpafvvi cslllalatv
      121 aycaaydhsa ahavsvvisv llfhfllagi llatccwflt naylreeapn tcvveqrvew
      181 qvwlyafdvh cnsffpmfvm lyvihyflsp llvahgfipa llsnllfmva asyhhylnfl
      241 gydvlpfler ttfflypigi viilspilil sgfnpsryfm niyfsrtl
//
LOCUS       XP_040942561             288 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-50 homolog isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942561
VERSION     XP_040942561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086627.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="protein unc-50 homolog isoform X1"
                     /calculated_mol_wt=33335
     Region          57..284
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..288
                     /gene="LOC107928961"
                     /coded_by="XM_041086627.1:55..921"
                     /db_xref="GeneID:107928961"
ORIGIN      
        1 msarlaywss flrfrllifk snsksnsykn ssnmsptvsk trssisisrp namfpqylrr
       61 ivkwqqmdie ytfwqmlhlc tapkiayqht kyhkqtknqw arddpafvvi cslllalatv
      121 aycaaydhsa ahavsvvisv llfhfllagi llatccwflt naylreeapn tcvveqrvew
      181 qvwlyafdvh cnsffpmfvm lyvihyflsp llvahgfipa llsnllfmva asyhhylnfl
      241 gydvlpfler ttfflypigi viilspilil sgfnpsryfm niyfsrtl
//
LOCUS       XP_040942562             285 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-50 homolog isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942562
VERSION     XP_040942562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086628.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="protein unc-50 homolog isoform X2"
                     /calculated_mol_wt=32922
     Region          57..281
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..285
                     /gene="LOC107928961"
                     /coded_by="XM_041086628.1:55..912"
                     /db_xref="GeneID:107928961"
ORIGIN      
        1 msarlaywss flrfrllifk snsksnsykn ssnmsptvsk trssisisrp namfpqylrr
       61 ivkwqqmdie ytfwqmlhlc tapkiayqht kyhkqtknqw arddpafvvi cslllalatv
      121 aycaaydhsa ahavsvvisv llfhfllagi llatccwflt naylreeapn tcvveqrvew
      181 lyafdvhcns ffpmfvmlyv ihyflspllv ahgfipalls nllfmvaasy hhylnflgyd
      241 vlpflerttf flypigivii lspililsgf npsryfmniy fsrtl
//
LOCUS       XP_040942563             252 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-50 homolog isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942563
VERSION     XP_040942563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086629.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="protein unc-50 homolog isoform X3"
                     /calculated_mol_wt=29035
     Region          24..248
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..252
                     /gene="LOC107928961"
                     /coded_by="XM_041086629.1:167..925"
                     /db_xref="GeneID:107928961"
ORIGIN      
        1 msptvsktrs sisisrpnam fpqylrrivk wqqmdieytf wqmlhlctap kiayqhtkyh
       61 kqtknqward dpafvvicsl llalatvayc aaydhsaaha vsvvisvllf hfllagilla
      121 tccwfltnay lreeapntcv veqrvewlya fdvhcnsffp mfvmlyvihy flspllvahg
      181 fipallsnll fmvaasyhhy lnflgydvlp flerttffly pigiviilsp ililsgfnps
      241 ryfmniyfsr tl
//
LOCUS       XP_040942564             246 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942564
VERSION     XP_040942564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086630.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..246
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27574
     Region          33..240
                     /region_name="BSP"
                     /note="Peptidase of plants and bacteria; pfam04450"
                     /db_xref="CDD:427956"
     CDS             1..246
                     /gene="LOC107928816"
                     /coded_by="XM_041086630.1:24..764"
                     /db_xref="GeneID:107928816"
ORIGIN      
        1 mihqikqtnq kmanhpvffl vyllalatsl hsstavdytv tnevpttpgg tvfdkelgve
       61 ytrqqmesas qfiwnlfrqp dpasrknvqs vslfivdnld ervvalasnn ninvsdksiq
      121 gltgdelkrs fngvlyhemt hiwqwngngq igdghlgnlt egvadfvrlk adyvpggwpr
      181 pgdgehwydg yavtayfldy ceglksgfva elnaklkdgy spdfffqilg ktvdqlwtdy
      241 kniprn
//
LOCUS       XP_016715574              56 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S29 [Gossypium hirsutum].
ACCESSION   XP_016715574
VERSION     XP_016715574.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860085.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..56
                     /product="40S ribosomal protein S29"
                     /calculated_mol_wt=6270
     Region          4..56
                     /region_name="PTZ00218"
                     /note="40S ribosomal protein S29; Provisional"
                     /db_xref="CDD:185518"
     CDS             1..56
                     /gene="LOC107928808"
                     /coded_by="XM_016860085.2:228..398"
                     /db_xref="GeneID:107928808"
ORIGIN      
        1 mghsnvwnsh pktygpgsra crvcgnphai irkyglmccr qcfrsnakei gfikyr
//
LOCUS       XP_016715701             629 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715701
VERSION     XP_016715701.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715701.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="vacuolar-sorting receptor 3 isoform X1"
                     /calculated_mol_wt=69554
     Region          52..179
                     /region_name="PA_VSR"
                     /note="Protease-associated (PA) domain-containing plant
                     vacuolar sorting receptor (VSR). This group includes
                     various PA domain-containing VSRs such as garden pea
                     BP-80, pumpkin PV72, and various Arabidopsis VSRs
                     including AtVSR1. In contrast to most eukaryotes; cd02125"
                     /db_xref="CDD:239040"
     Site            132..134
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239040"
     Region          <331..398
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
     Region          501..521
                     /region_name="cEGF"
                     /note="Complement Clr-like EGF-like; pfam12662"
                     /db_xref="CDD:463661"
     Region          518..>546
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(518,521,537)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..629
                     /gene="LOC107928919"
                     /coded_by="XM_016860212.2:252..2141"
                     /db_xref="GeneID:107928919"
ORIGIN      
        1 melrtfhhhl lqgfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvypk enqkacksfd dfgisfkskp gslptfvlvd rgdcffalkv wnvqqagasa
      121 vlvaddieea litmdnpeed sssakyieni tipsaliekt fgetlkkais ggdmvnvnld
      181 wreavphpdd rveyelwtns ndecgvkcdm lmafvkdfkg aaqilekggy sqftphyitw
      241 ycpqaftlsr qcksqcinrg rycapdpeqd fssgyegkdv vienlrqlcv fkvanetnrp
      301 wvwwdyvtdf qircpmkekk ynkecadvvi kslgldakki ekcmgdpdad mensvlkeeq
      361 daqvgkgsrg dvtilptlvv nnrqyrgkla kgavlkaica gfeettepav clsgdvetne
      421 clennggcwq dkaanltacr dtfrgrvcec plvdgvqfkg dgyshcepgg pgrckinngg
      481 cwhesqngra ysacldngdv kcqcppgfkg dgvkscedid eckekracqc pecsckntwg
      541 syectcngdl lyirdhdtci sksgtevrsa waamsvilig lamagggayl vykyrlrsym
      601 dseiraimaq ympldsqgev pnyvsndra
//
LOCUS       XP_016715703             629 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715703
VERSION     XP_016715703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="vacuolar-sorting receptor 3 isoform X1"
                     /calculated_mol_wt=69554
     Region          52..179
                     /region_name="PA_VSR"
                     /note="Protease-associated (PA) domain-containing plant
                     vacuolar sorting receptor (VSR). This group includes
                     various PA domain-containing VSRs such as garden pea
                     BP-80, pumpkin PV72, and various Arabidopsis VSRs
                     including AtVSR1. In contrast to most eukaryotes; cd02125"
                     /db_xref="CDD:239040"
     Site            132..134
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239040"
     Region          <331..398
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
     Region          501..521
                     /region_name="cEGF"
                     /note="Complement Clr-like EGF-like; pfam12662"
                     /db_xref="CDD:463661"
     Region          518..>546
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(518,521,537)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..629
                     /gene="LOC107928919"
                     /coded_by="XM_016860214.2:250..2139"
                     /db_xref="GeneID:107928919"
ORIGIN      
        1 melrtfhhhl lqgfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvypk enqkacksfd dfgisfkskp gslptfvlvd rgdcffalkv wnvqqagasa
      121 vlvaddieea litmdnpeed sssakyieni tipsaliekt fgetlkkais ggdmvnvnld
      181 wreavphpdd rveyelwtns ndecgvkcdm lmafvkdfkg aaqilekggy sqftphyitw
      241 ycpqaftlsr qcksqcinrg rycapdpeqd fssgyegkdv vienlrqlcv fkvanetnrp
      301 wvwwdyvtdf qircpmkekk ynkecadvvi kslgldakki ekcmgdpdad mensvlkeeq
      361 daqvgkgsrg dvtilptlvv nnrqyrgkla kgavlkaica gfeettepav clsgdvetne
      421 clennggcwq dkaanltacr dtfrgrvcec plvdgvqfkg dgyshcepgg pgrckinngg
      481 cwhesqngra ysacldngdv kcqcppgfkg dgvkscedid eckekracqc pecsckntwg
      541 syectcngdl lyirdhdtci sksgtevrsa waamsvilig lamagggayl vykyrlrsym
      601 dseiraimaq ympldsqgev pnyvsndra
//
LOCUS       XP_016715702             629 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715702
VERSION     XP_016715702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="vacuolar-sorting receptor 3 isoform X1"
                     /calculated_mol_wt=69554
     Region          52..179
                     /region_name="PA_VSR"
                     /note="Protease-associated (PA) domain-containing plant
                     vacuolar sorting receptor (VSR). This group includes
                     various PA domain-containing VSRs such as garden pea
                     BP-80, pumpkin PV72, and various Arabidopsis VSRs
                     including AtVSR1. In contrast to most eukaryotes; cd02125"
                     /db_xref="CDD:239040"
     Site            132..134
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239040"
     Region          <331..398
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
     Region          501..521
                     /region_name="cEGF"
                     /note="Complement Clr-like EGF-like; pfam12662"
                     /db_xref="CDD:463661"
     Region          518..>546
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(518,521,537)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..629
                     /gene="LOC107928919"
                     /coded_by="XM_016860213.2:250..2139"
                     /db_xref="GeneID:107928919"
ORIGIN      
        1 melrtfhhhl lqgfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvypk enqkacksfd dfgisfkskp gslptfvlvd rgdcffalkv wnvqqagasa
      121 vlvaddieea litmdnpeed sssakyieni tipsaliekt fgetlkkais ggdmvnvnld
      181 wreavphpdd rveyelwtns ndecgvkcdm lmafvkdfkg aaqilekggy sqftphyitw
      241 ycpqaftlsr qcksqcinrg rycapdpeqd fssgyegkdv vienlrqlcv fkvanetnrp
      301 wvwwdyvtdf qircpmkekk ynkecadvvi kslgldakki ekcmgdpdad mensvlkeeq
      361 daqvgkgsrg dvtilptlvv nnrqyrgkla kgavlkaica gfeettepav clsgdvetne
      421 clennggcwq dkaanltacr dtfrgrvcec plvdgvqfkg dgyshcepgg pgrckinngg
      481 cwhesqngra ysacldngdv kcqcppgfkg dgvkscedid eckekracqc pecsckntwg
      541 syectcngdl lyirdhdtci sksgtevrsa waamsvilig lamagggayl vykyrlrsym
      601 dseiraimaq ympldsqgev pnyvsndra
//
LOCUS       XP_016715704             615 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715704
VERSION     XP_016715704.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860215.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715704.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..615
                     /product="vacuolar-sorting receptor 3 isoform X2"
                     /calculated_mol_wt=67903
     Region          52..165
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            118..120
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:238300"
     Region          <317..384
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
     Region          487..507
                     /region_name="cEGF"
                     /note="Complement Clr-like EGF-like; pfam12662"
                     /db_xref="CDD:463661"
     Region          504..>532
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(504,507,523)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..615
                     /gene="LOC107928919"
                     /coded_by="XM_016860215.2:236..2083"
                     /db_xref="GeneID:107928919"
ORIGIN      
        1 melrtfhhhl lqgfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvypk enqkacksfd dfgisfkskp gslptfvlvd rggasavlva ddieealitm
      121 dnpeedsssa kyienitips aliektfget lkkaisggdm vnvnldwrea vphpddrvey
      181 elwtnsndec gvkcdmlmaf vkdfkgaaqi lekggysqft phyitwycpq aftlsrqcks
      241 qcinrgryca pdpeqdfssg yegkdvvien lrqlcvfkva netnrpwvww dyvtdfqirc
      301 pmkekkynke cadvvikslg ldakkiekcm gdpdadmens vlkeeqdaqv gkgsrgdvti
      361 lptlvvnnrq yrgklakgav lkaicagfee ttepavclsg dvetneclen nggcwqdkaa
      421 nltacrdtfr grvcecplvd gvqfkgdgys hcepggpgrc kinnggcwhe sqngraysac
      481 ldngdvkcqc ppgfkgdgvk scedidecke kracqcpecs ckntwgsyec tcngdllyir
      541 dhdtcisksg tevrsawaam sviliglama gggaylvyky rlrsymdsei raimaqympl
      601 dsqgevpnyv sndra
//
LOCUS       XP_016715763             341 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein-like 1 [Gossypium hirsutum].
ACCESSION   XP_016715763
VERSION     XP_016715763.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860274.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715763.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..341
                     /product="zinc finger protein-like 1"
                     /calculated_mol_wt=37519
     Region          52..110
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(54,57,74,76,79,82,101,104)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..341
                     /gene="LOC107928957"
                     /coded_by="XM_016860274.2:138..1163"
                     /db_xref="GeneID:107928957"
ORIGIN      
        1 mvvckcrkat klycfvhkvp vcgecicfpe hqicvirtys ewvidgeynw ppkcckcqav
       61 leegagsett rlgclhviht nclishiksf pphtapagyt cpscsttiwp pknvkdsasr
      121 lhsllkeaim qtgmeknlfg nhpppafasd plvnvnstgq rdrdgnslps vaidegystv
      181 agpsklsvte imeidgpssa enyikasspv apvattrkst vhadrqnsei syyaddedgn
      241 rkkysrrgpl rhkflralip fwssalptlp vtapprkdas naddvpegrl khqrssrmdp
      301 rkillfmaim acmatmgily yriaqralge gliddepivt n
//
LOCUS       XP_040942566             302 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 [Gossypium hirsutum].
ACCESSION   XP_040942566
VERSION     XP_040942566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086632.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="exosome complex component RRP43"
                     /calculated_mol_wt=32208
     Region          20..292
                     /region_name="RNase_PH_RRP43"
                     /note="RRP43 subunit of eukaryotic exosome; cd11369"
                     /db_xref="CDD:206774"
     Site            order(58,60,75,77..79,94,96,101,118,121,125,147,152,157,
                     175..177,218,257..268,274,278)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:206774"
     CDS             1..302
                     /gene="LOC107928852"
                     /coded_by="XM_041086632.1:16..924"
                     /db_xref="GeneID:107928852"
ORIGIN      
        1 mglpnangdl stevevdafr rlfplhfyek hllesispda rplgrarett ialgavasan
       61 gsalakigst tmlaaikmkv mtpsletpde gcividfhmp picspivrpg gpaeaapvva
      121 kqlsdtilss gminlkelsl vsgkaawmay ldiycldadg alfdtallsa vaafshleip
      181 vpvvslnddg kivlseeqgl sdrepvnkek rkinlssipf sltcvlhkny iladptaeee
      241 simdtivtvv ldsssqlvsl hkpggtvlay tsaiqdcial trqrvkelqk ileeaisgme
      301 vd
//
LOCUS       XP_016715721             485 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium transporter MRS2-3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715721
VERSION     XP_016715721.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715721.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..485
                     /product="magnesium transporter MRS2-3 isoform X1"
                     /calculated_mol_wt=53786
     Region          51..483
                     /region_name="Mrs2_Mfm1p-like"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     cd12823"
                     /db_xref="CDD:213357"
     Site            order(62,92,104,106..107,121..124,211,214,263..264,267,
                     378)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:213357"
     Site            order(79,82..83,93,95,129,133,202,205,209,213,216..217,
                     220,223..224,226..227,230,242..243,245..246,249..250,
                     253..254,256..257,261,263..264,267..268,271..272,372..373,
                     375..376,379..380,382..383,386..387,389..390,392..394,
                     397..404,406..418,420..422,424..429,431..434,438..441,
                     456..457,460..461,477,480)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:213357"
     CDS             1..485
                     /gene="LOC107928927"
                     /coded_by="XM_016860232.2:146..1603"
                     /db_xref="GeneID:107928927"
ORIGIN      
        1 mrsqppsspp kpeedpdpsa rpapfpnqtl ppttattaag hrkkgtgvra wlildstcqt
       61 qmveagkhai mrrtglpard lrildpllsy pstilgrera ivinlehika iitaqevlll
      121 nskdpsvtpf vdeiqsrilc hfqatkdqeg gvddssyiir sssqnlssrf sqsqtqddeg
      181 kleekqslen pngskilpfe fvaleaclea acscleneak tleqeahpal dkltskistl
      241 nlervrqiks rlvaitgrvq kvrdelehll dddedmaemy ltekqllens stssmnerdd
      301 mddgilrpdi nertpaeisl aanyegdiqd sdnpqdnmfg atnaigrdsh gthtsttrsa
      361 iskhldveel emlleayfvq idgtlnklst lreyvddted yinimlddkq nhllqmgvml
      421 ttatlvisaf ivvagifgmn ihielfdedk agmpeflwti gggaagsifl yviaiawcky
      481 krlle
//
LOCUS       XP_016715722             404 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium transporter MRS2-3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715722
VERSION     XP_016715722.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715722.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..404
                     /product="magnesium transporter MRS2-3 isoform X2"
                     /calculated_mol_wt=44675
     Region          51..>392
                     /region_name="Mrs2_Mfm1p-like"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     cd12823"
                     /db_xref="CDD:213357"
     Site            order(62,92,104,106..107,121..124,211,214,263..264,267,
                     378)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:213357"
     CDS             1..404
                     /gene="LOC107928927"
                     /coded_by="XM_016860233.2:65..1279"
                     /db_xref="GeneID:107928927"
ORIGIN      
        1 mrsqppsspp kpeedpdpsa rpapfpnqtl ppttattaag hrkkgtgvra wlildstcqt
       61 qmveagkhai mrrtglpard lrildpllsy pstilgrera ivinlehika iitaqevlll
      121 nskdpsvtpf vdeiqsrilc hfqatkdqeg gvddssyiir sssqnlssrf sqsqtqddeg
      181 kleekqslen pngskilpfe fvaleaclea acscleneak tleqeahpal dkltskistl
      241 nlervrqiks rlvaitgrvq kvrdelehll dddedmaemy ltekqllens stssmnerdd
      301 mddgilrpdi nertpaeisl aanyegdiqd sdnpqdnmfg atnaigrdsh gthtsttrsa
      361 iskhldveel emlleayfvq idgtlnklst icctipfcaf hshl
//
LOCUS       XP_016715779             579 aa            linear   PLN 06-AUG-2024
DEFINITION  probable zinc metallopeptidase EGY3, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016715779
VERSION     XP_016715779.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715779.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..579
                     /product="probable zinc metallopeptidase EGY3,
                     chloroplastic"
                     /calculated_mol_wt=63463
     Region          284..498
                     /region_name="S2P-M50"
                     /note="Site-2 protease (S2P) class of zinc
                     metalloproteases (MEROPS family M50) cleaves transmembrane
                     domains of substrate proteins, regulating intramembrane
                     proteolysis (RIP) of diverse signal transduction
                     mechanisms. Members of this family use proteolytic...;
                     cl10020"
                     /db_xref="CDD:447882"
     Site            order(329..330,333,469,477)
                     /site_type="active"
                     /db_xref="CDD:100081"
     Site            469..472
                     /site_type="other"
                     /note="putative substrate binding region [chemical
                     binding]"
                     /db_xref="CDD:100081"
     CDS             1..579
                     /gene="LOC107928973"
                     /coded_by="XM_016860290.2:212..1951"
                     /db_xref="GeneID:107928973"
ORIGIN      
        1 mtalcftshs slsscnlhth pykkkhgfnf nnlrsnlsti inktqssnpr isihfsvnrr
       61 hfplkssvkd eqatetepta hspvaveske psdethgpns eetegkedqq emdwktdeef
      121 krfmgnpsie aaiklekkra drklkeldre sngnpivglf nkvvrdnlar ekerleqaee
      181 tfkaldlnkl kscfgfdtff atdvrrfgdg gifignlrrp ieevipilek kltkaagrev
      241 vlwfmeektn ditkqacvvq pkaeidlqfe stklstpwgy vsaialcvtt fgtialmsgf
      301 flkpgatfdd yladvlplfg gfisilgvse iatrvtaary gvklspsflv psnwtgclgv
      361 mnnyesllpn kkalfdipva rtasayltsl vlaiaafisd gsfnggdnal firpqffynn
      421 pllsfvqfvi gpyadelgnv lpnamegvgv pvdplafagl lgmvvtslnl lpcgrleggr
      481 iaqamfgrst amllsfatsl llgigglsgs vlclawglfa tffrggeemp akdeitplgd
      541 nrfawgivlg licfltlfpn gggtfsnpfl sdpffrgdl
//
LOCUS       XP_016715655            2475 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase TOR [Gossypium hirsutum].
ACCESSION   XP_016715655
VERSION     XP_016715655.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860166.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715655.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2475
                     /product="serine/threonine-protein kinase TOR"
                     /calculated_mol_wt=277793
     Region          170..218
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     Region          256..2475
                     /region_name="TEL1"
                     /note="Phosphatidylinositol kinase or protein kinase, PI-3
                     family [Signal transduction mechanisms]; COG5032"
                     /db_xref="CDD:227365"
     Region          560..587
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          597..627
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          635..665
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1028..1058
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1067..1093
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..2475
                     /gene="LOC107928888"
                     /coded_by="XM_016860166.2:333..7760"
                     /db_xref="GeneID:107928888"
ORIGIN      
        1 mavtlqslrf cglaasgpag gsfealnril adlctrgnpk egtslalkkh veeeardlsg
       61 eafsrfmdql ydrisslles ndvaqnmgal raidelidva lgenaskvsr fsnymrtvfe
      121 tkrdpeilvl askvlghlar aggamtadev efqvktalqw lrgdrieyrr faavlilkem
      181 aenastvfnv hvpefvdaiw valrdptlav reravealra clrviekret rwrvqwyyrm
      241 featqdglgk napihsihgs llavgellrn tgefmmsryr evaeivlryl ehrdrlvrls
      301 itsllpriah flrdrfvtny lticmnhilt vlripaeras gfialgemag aldgelvhyl
      361 ptitshlrda iaprrgrpsl ealacvgnia kamgpamesh vrglldimfs aglsptlvea
      421 lqqitvsips llptiqdrll dcislvlsks hyfqarpava rgtttnitqp vaelsgsahv
      481 qlalqtlacf nfkghellef argsvvryld dedgatrkda afcccklvan sfsditssqf
      541 gsgrssragg krrrlieelv eklliaavad advtvrhsif sslhgnrgfd dflaqadsls
      601 avfaalnded fdvreyaisv agrlseknpa yvlpalrrhl iqlltylgqs adnkcreesa
      661 kllgclirnc erlilpyiap vhkalvarll egtgvnanng fisgvlvtvg dlarvggfam
      721 reyiselmpl ivealldgaa vtkrevavat lgqvvqstgy viapyneypq llglllklln
      781 gelvwstrre vlkvlgimga ldphahkrnq qsvsgshgdv traasdsgqh ipssmdelpm
      841 dlwpsfatse dyystvains lmrilrdpsl asyhqkvvgs lmfifksmgl gcvpylpkvl
      901 hdlfqivrtc ddhlkdfitw klgtlvsivr qhirkylpel lsliselwsl fslpastrps
      961 rgfpvlhlve qlclalndef rkylpailpc ciqvlsdaer cndytyvldi lhtlevfggt
     1021 ldehmhlllp alirlfkvdg sveirraair tltrlipcvq vtghisslvh hlkivldgkn
     1081 delrkdavda lcclahalge dftifipsih klllrhplqh kefeeiegrl rrreplivgs
     1141 taaqrlsrrp pvevvsdpln dmendpyeeg ndvqkhprgh qvndgrlrta geasqrstke
     1201 dwaewmrhfs iellkespsp alrtcarlaq lqpfvgrelf aagfvscwsq lnessqrqlv
     1261 rslemafssp nippeilatl lnlaefmerd erplpidirl laalaekcra fakalhykem
     1321 efegarskkm danpvavvea lihinnqlhq heaavgiltn aqqyldvqlk eswyeklqrw
     1381 ddalkaytak aaqassphlv leatlgrmrc laalarweel nnlcreywtp aepsarlema
     1441 pmaanaawnm gewdqmaeyv srlddgdetk lralgntaat gdgssngtfy ravllvrrgk
     1501 ydeaheyver arkclatela alvlesyera ysnmvrvqql seleevidyc tlpmgnpvae
     1561 grralirnmw teriqgakrn vevwqallav ralvlppted ietwlkfasl crqngrisqa
     1621 rstlikllqy dpetapenvr yhgppqvmla ylkyqwslgd dlkrkeafsr lqnlarelsi
     1681 spniqsipst asmsgtsanv pllarvylkl gawqwtlssp gldddsiqei lsafrnatqf
     1741 atkwakawha walfntavms hyargfqtia sqfvvsavng yfhsiacaan akgvddslqd
     1801 ilrlltlwfn hgataevqma lqvgfahvni ntwlavlpqi iarihsnnha vreliqsllv
     1861 rigqshpqal mypllvacks isnlrkaaaq evvdkvrqhs gvlvdqaqlv skelirvail
     1921 whelwhegle easrlyfgeh niegmlkvle plhemleega mrdnttiker afieayhhdl
     1981 sqayeccmky krtgkdaelt qawdlyyhvf rridkqlqsl ttldlqsvsp elvecrdlel
     2041 avpgtyraes pvvtiasfah qldvitskqr prkltihgsd gedyafllkg hedlrqderv
     2101 mqlfglvntl lensrktaek dlsiqryevi plspnsglig wvpncdtlhq lireyrdarr
     2161 itlnqehkfm lslapdydhl pliskvevfe yalqntegnd lakvlwlksr tsevwlerrt
     2221 nytrslavms mvgyllglgd rhpsnlmlrr ssgkilhidf gdcfeasmnr ekfpekvpfr
     2281 ltrmlvkame vggiegnfrl tcenvmqvlr snkdsvmamm eafvhdplin wrlfnfnevp
     2341 qmsifasthg tavtnteeta pskelaqpqr garerellqa vnqlgdanev lneravvvma
     2401 rmsnkltgrd flscssipta ssniqhsidh stlisgdnre vehglsvklq vqkliiqats
     2461 henlcqnyvg wcpfw
//
LOCUS       XP_040942568             190 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942568
VERSION     XP_040942568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086634.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..190
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21674
     CDS             1..190
                     /gene="LOC121213692"
                     /coded_by="XM_041086634.1:216..788"
                     /db_xref="GeneID:121213692"
ORIGIN      
        1 mnivkkvekw gknaevlslq qslnstdsvh heskseihnd gcchcdlisd sdfenqdsev
       61 cvlndtnpgi tlnkqntkse lkkrclwlfg lfrkkksdev tmsrepsmgn gplkwqfpri
      121 pmleyggprp yyqpfqscyp pmmgrplgps yypfavmqsp plygvfnsrp ptkvnpmihy
      181 tsyadnyspw
//
LOCUS       XP_040942569             482 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 33 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942569
VERSION     XP_040942569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086635.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="protein DETOXIFICATION 33 isoform X1"
                     /calculated_mol_wt=52368
     Region          21..453
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(259,263,291,294,373,377,404,430,434)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..482
                     /gene="LOC107928812"
                     /coded_by="XM_041086635.1:18..1466"
                     /db_xref="GeneID:107928812"
ORIGIN      
        1 masleveekp levkqntiwg eskkmwaiag pailvsvsqf sigfvtvafa ghlgelelaa
       61 vtittnvieg fvfgimlgmg saletlcgqa vgagqhnmlg iylqrswiit gitalcltpc
      121 yllatpilnl lrqdkamsel agkyckmvip qffayamnfp iqkflqsqtk vwvmtiisii
      181 glgchvllnw alvtklelgl lgaamagnis wwlqviamvi yvvagffpds wtglsllafk
      241 slwgfvklsl asavmlclel wyftaiilmv gylkdptlav dsisiclnlq lwtsmvtlgf
      301 niaasvrvsn elgagrpkaa kfsivvvvlt slavgiifma iilatkhdfp klftdkqlvi
      361 kaasklgyfl aatiflnsil pvlhgvavga gwqayvglin itcyyllgip agallgfkfk
      421 lrvqgiwfgm ligtvlqtti llfvmlratw rnegplaspk klqnmsltpr geevkehvkd
      481 ns
//
LOCUS       XP_016715578             481 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 33 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715578
VERSION     XP_016715578.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860089.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715578.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..481
                     /product="protein DETOXIFICATION 33 isoform X2"
                     /calculated_mol_wt=52180
     Region          21..454
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(259,263,291,294,373,377,404,430,434)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..481
                     /gene="LOC107928812"
                     /coded_by="XM_016860089.2:18..1463"
                     /db_xref="GeneID:107928812"
ORIGIN      
        1 masleveekp levkqntiwg eskkmwaiag pailvsvsqf sigfvtvafa ghlgelelaa
       61 vtittnvieg fvfgimlgmg saletlcgqa vgagqhnmlg iylqrswiit gitalcltpc
      121 yllatpilnl lrqdkamsel agkyckmvip qffayamnfp iqkflqsqtk vwvmtiisii
      181 glgchvllnw alvtklelgl lgaamagnis wwlqviamvi yvvagffpds wtglsllafk
      241 slwgfvklsl asavmlclel wyftaiilmv gylkdptlav dsisiclnlq lwtsmvtlgf
      301 niaasvrvsn elgagrpkaa kfsivvvvlt slavgiifma iilatkhdfp klftdkqlvi
      361 kaasklgyfl aatiflnsil pvlhgvavga gwqayvglin itcyyllgip agallgfkfk
      421 lrvqgiwfgm ligtvlqtti llfvmlratw rneaveaeer lrtwggptet pnislesnsa
      481 s
//
LOCUS       XP_016715748             536 aa            linear   PLN 06-AUG-2024
DEFINITION  polyol transporter 5 [Gossypium hirsutum].
ACCESSION   XP_016715748
VERSION     XP_016715748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860259.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..536
                     /product="polyol transporter 5"
                     /calculated_mol_wt=58112
     Region          43..494
                     /region_name="MFS_PLT"
                     /note="Plant Polyol transporter family of the Major
                     Facilitator Superfamily of transporters; cd17437"
                     /db_xref="CDD:340995"
     Site            order(51,55,169,172..173,176,305..306,310..311,314..315,
                     343,409..410,413..414,418,441..442,445)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340995"
     CDS             1..536
                     /gene="LOC107928949"
                     /coded_by="XM_016860259.2:155..1765"
                     /db_xref="GeneID:107928949"
ORIGIN      
        1 msgfeadnng vsisvaadnk tgadfevskk pkrnkfafac silaslasil lgydigvmsg
       61 aiiyikddlk isdvqveilv gilnlyclig ayaagrtsdw igrrytivva aaiffvgall
      121 mgfatnyafl mvgrfvagig vgfalliapv ytaevspass rgflnsfpev finiglllgy
      181 vsnyafsklr aelgwrvmlg agaipsvfla igvltmpesp rwlimqgrlg eaktvlhkts
      241 dtkeeahgrl sdikaaagip edctddivqv qkqthgegvw kelflhptpv vrhvlicaig
      301 ihffqqaigl dsvvlyspri fekagitssd rkllatmavg lsktifilva tflldkigrr
      361 plllissggm vvilatlrfs ltiighsdnk itwavglcit mvlssvavfs igmgpiawvy
      421 steifplrlr aqgasigvav nrvtsgvism sfislyeais iggafflyag valvafffff
      481 tflpetqgkt leemewlfgk lvgwreeaqk lkrkrkmnea nhqiqlgnnl ttdrrc
//
LOCUS       XP_016715750             533 aa            linear   PLN 06-AUG-2024
DEFINITION  polyol transporter 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715750
VERSION     XP_016715750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860261.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..533
                     /product="polyol transporter 5 isoform X1"
                     /calculated_mol_wt=57458
     Region          43..494
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(51..52,55..56,59,91,141..142,144..146,149,169,
                     172..173,176,302,305..306,309..311,314,343,347,409..410,
                     414,418,434,437..438,441..442,445)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..533
                     /gene="LOC107928950"
                     /coded_by="XM_016860261.2:174..1775"
                     /db_xref="GeneID:107928950"
ORIGIN      
        1 msgfeadnhg vsisvavdnk tladfevlkk pkrnkfafac ailaslasil lgydigvmsg
       61 ailyikddlk isdvqveilv gilnlyclig ayvagrtsdw igrrytivva asiffvgall
      121 mgfatnytfl mvgrfvtgig vgfalliapv ytaevspasa rgflnsfpev finaglllgy
      181 vsnyafsklr adlgwrvmlg agailsvfla vgvlampesp rwlimqgrlg eaktvldkts
      241 dtkeeargrl sdikaaagip edctddivqv qkqthgegvw relilhptpa vrhvlicaig
      301 ihffqqaigl esvvlyspri fekagitssd hkllatmavg fskttfilva tflldkigrr
      361 plllissggm vvilatlgls ltvighsdkk qtwavglcit mvlssvavfs igmgpitwvy
      421 steifplrlr aqgaslgvav nrvmsgvism sfislykait iggafflyag valvafffff
      481 tflpetrgkt leemeglfgk lvgwreeakk mkrkrneasg dgigndqiql gki
//
LOCUS       XP_016715751             487 aa            linear   PLN 06-AUG-2024
DEFINITION  polyol transporter 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715751
VERSION     XP_016715751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860262.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..487
                     /product="polyol transporter 5 isoform X2"
                     /calculated_mol_wt=52599
     Region          8..448
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(9..10,13,45,95..96,98..100,103,123,126..127,130,256,
                     259..260,263..265,268,297,301,363..364,368,372,388,
                     391..392,395..396,399)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..487
                     /gene="LOC107928950"
                     /coded_by="XM_016860262.2:235..1698"
                     /db_xref="GeneID:107928950"
ORIGIN      
        1 mtlsfcidig vmsgailyik ddlkisdvqv eilvgilnly cligayvagr tsdwigrryt
       61 ivvaasiffv gallmgfatn ytflmvgrfv tgigvgfall iapvytaevs pasargflns
      121 fpevfinagl llgyvsnyaf sklradlgwr vmlgagails vflavgvlam pesprwlimq
      181 grlgeaktvl dktsdtkeea rgrlsdikaa agipedctdd ivqvqkqthg egvwrelilh
      241 ptpavrhvli caigihffqq aiglesvvly sprifekagi tssdhkllat mavgfskttf
      301 ilvatflldk igrrplllis sggmvvilat lglsltvigh sdkkqtwavg lcitmvlssv
      361 avfsigmgpi twvysteifp lrlraqgasl gvavnrvmsg vismsfisly kaitiggaff
      421 lyagvalvaf fffftflpet rgktleemeg lfgklvgwre eakkmkrkrn easgdgignd
      481 qiqlgki
//
LOCUS       XP_016715745             525 aa            linear   PLN 06-AUG-2024
DEFINITION  putative polyol transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016715745
VERSION     XP_016715745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860256.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..525
                     /product="putative polyol transporter 1"
                     /calculated_mol_wt=56315
     Region          40..490
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(48..49,52..53,56,88,138..139,141..143,146,166,
                     169..170,173,299,302..303,306..308,311,340,344,406..407,
                     411,415,431,434..435,438..439,442)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..525
                     /gene="LOC107928944"
                     /coded_by="XM_016860256.2:70..1647"
                     /db_xref="GeneID:107928944"
ORIGIN      
        1 magsghenga vsirpadnla vfevskkpkk nkfalgcaml asltsmllgy digvmsgaii
       61 fikkdlkisd vqieilvgvl nlyclvgsiv agniadwigr rytivlanvi ifvgslfmgf
      121 svnyaflmvg rfiagigvgf aimgavlyna eispassrgf ltsfpevcin vgillgyvsn
      181 yafsklptri gwrlmlgaga tpsiflvfav lampesprwl vmqgklgeak vvlektldtk
      241 eeallrlndi keaagipqds tgdvvvvqkq tnsngawrel llhptptvkh ilictvgihf
      301 fqqssgvdav vlysprifek agitssneql lttvavgick tifilvatfl ldksgrrall
      361 listggmvvs latlgfslti inhseakltw aialcitmvl sfvaffaigm gpiagiytse
      421 ifplklraqg islgvavnrv tsgiiamtfl slyqaitigg afflfagiaa vgwlffnicl
      481 petrgktlee terlfgnlvg wrevdkkmne dntkrtthgq egsdg
//
LOCUS       XP_016715649             560 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE7 [Gossypium hirsutum].
ACCESSION   XP_016715649
VERSION     XP_016715649.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715649.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..560
                     /product="transcription factor GTE7"
                     /calculated_mol_wt=62497
     Region          179..275
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(203,210,213,252,256,262)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99938"
     Region          385..448
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     CDS             1..560
                     /gene="LOC107928883"
                     /coded_by="XM_016860160.2:228..1910"
                     /db_xref="GeneID:107928883"
ORIGIN      
        1 malavlanrs esnwppqpkn svvdfmgkap ftakkpnpnp kfnkkrhiyr qfaqlddvgg
       61 hvvddppavt qsaasddass inrkindfss gayvsfpiss ftrkelidlk nrliseleqi
      121 refknriqsn dfharfsstk kplpkknisg nkrplppnls kelkrlnpqe ngkasrahlm
      181 kncsqilskl mkhkhgyifn spvdvvglgl hdyyaiiknp mdlgtvksrl tknfygspld
      241 faadvrltfn namlynpkgh evyalaeqll arfeelfrpl glkleeqedp qemnyyeeel
      301 qasswdhgea ermkkdweid kedsiniasr sdkiggvsgs vsnqnappsq mqlqpperma
      361 spvrpppvkp vklpkpkakd pnkremtmee kqklgiglqs lpqekmdnvv hiirkrnghl
      421 rqdgdeield ieamdtetlw eldrfvtnyk kmvskikrqa lmannvasnd snrrettvek
      481 mdvamdmkkp kkgdagdedv digdempmss fppveiekdn drasssssss sssssgssss
      541 sgsdsgsssg sdsdaddars
//
LOCUS       XP_016715689             534 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715689
VERSION     XP_016715689.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715689.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..534
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59488
     Region          62..124
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(91..93,101,104..105,108..109)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..534
                     /gene="LOC107928909"
                     /coded_by="XM_016860200.2:258..1862"
                     /db_xref="GeneID:107928909"
ORIGIN      
        1 mdgsnsteae rwltiaekll asrdfhgtrt fairaresap vladqilavt dillaaqanp
       61 hdwygilqli pltqsmevva sqyrklaill npaentlsfa dqafrlvsea wnvlsnpskk
      121 liydnelrfl qfgpvsqmnq lgqfnqqhyh hqpelqqqqq pqtqmlfmqp qpppppketq
      181 tlfmqtpqke tqtqvtqslf vrsprsnnkd gnaeleggrq lglsntlpes trpaesawtr
      241 qiyqlglaep sqvnqtgsvg sshicwpepi rpsqinrpep irasqvnqpg tssssqfnlt
      301 qptrtgqinn taspspppnp spptstters raeptsvtqk tnltrpneat esegpafwtp
      361 tsvtqktnst rpneaieseg pafwtptsvt qktnsarpnq atesegpafw tacpycyvly
      421 eypnaykdct lrcqtkscrr afhamvipsp pfngndtyfc cwgfyplgfs gngknmgrkf
      481 pswspissvf tcsnnkdegk qknpkksapr vfydendvyv eisdpsmgse dnde
//
LOCUS       XP_016715767             459 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol glycan anchor biosynthesis class U protein
            [Gossypium hirsutum].
ACCESSION   XP_016715767
VERSION     XP_016715767.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860278.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715767.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..459
                     /product="phosphatidylinositol glycan anchor biosynthesis
                     class U protein"
                     /calculated_mol_wt=51757
     Region          18..424
                     /region_name="PIG-U"
                     /note="GPI transamidase subunit PIG-U; pfam06728"
                     /db_xref="CDD:429085"
     CDS             1..459
                     /gene="LOC107928962"
                     /coded_by="XM_016860278.2:214..1593"
                     /db_xref="GeneID:107928962"
ORIGIN      
        1 meklkkkirs fsfwnwvias iifrliliyf pknlnlssrp evstpltsfr rlaegywlkq
       61 ssmssyagsm yhgsplllsl lgpltvkrie gqpnhllysl vsviadvvsa mliratgqnl
      121 rlaylrgles ldlvkqidvs eflfsgdiaa liylcnpfti vacvglstsp ienmavilcl
      181 ygacsrlipl aafgwviath lslypailii pvifllgcgp dspprklflq rhqqkevlnq
      241 sklppgfswg piihfafwaf lwsvyvlvlc gislkqfggl wemfkstygf iltvedlspn
      301 igvlwyffae vfeffrnffl ivfhvnilfm ilplairlrh rpcylafvyv aicsmlksyp
      361 svgdsalylg llgwfvnela dmqfslflfc gyvgvsllsp vmhnlwiwrg tgnanfyftt
      421 amvyaclqiv lvvegvsavl nhdrklriri tgkpqdaks
//
LOCUS       XP_040942571             313 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 1 [Gossypium hirsutum].
ACCESSION   XP_040942571
VERSION     XP_040942571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086637.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..313
                     /product="phytosulfokine receptor 1"
                     /calculated_mol_wt=34326
     Region          10..>299
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          15..36
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          37..60
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          61..84
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          85..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          256..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..313
                     /gene="LOC107928910"
                     /coded_by="XM_041086637.1:2370..3311"
                     /db_xref="GeneID:107928910"
ORIGIN      
        1 mgenlcknss ssnievldms mnffgevqqg lsnctllqyl mingnnfrsl prgifqmmqn
       61 lrvlhlqnns fsgtldhgig hlsnlveldi ssnsftgvfl dvfgslgkle kfsassnnfn
      121 galptslpns psittldlhn nslndpinln ctamtklrsl hlgsnklygs ilhslspcts
      181 lnipnlghnn ldgqipesfk nlnaltvlsl srtnlvnlss tlkilqhfkn ltvlmlpenf
      241 qgeqipgday fqfrslkvls iaygelrgsi spwllgcggl qfldlltnhl tgtitcftwi
      301 cqtihsqvry qkg
//
LOCUS       XP_040942572             313 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 1 [Gossypium hirsutum].
ACCESSION   XP_040942572
VERSION     XP_040942572.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086638.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..313
                     /product="phytosulfokine receptor 1"
                     /calculated_mol_wt=34326
     Region          10..>299
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          15..36
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          37..60
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          61..84
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          85..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          256..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..313
                     /gene="LOC107928910"
                     /coded_by="XM_041086638.1:661..1602"
                     /db_xref="GeneID:107928910"
ORIGIN      
        1 mgenlcknss ssnievldms mnffgevqqg lsnctllqyl mingnnfrsl prgifqmmqn
       61 lrvlhlqnns fsgtldhgig hlsnlveldi ssnsftgvfl dvfgslgkle kfsassnnfn
      121 galptslpns psittldlhn nslndpinln ctamtklrsl hlgsnklygs ilhslspcts
      181 lnipnlghnn ldgqipesfk nlnaltvlsl srtnlvnlss tlkilqhfkn ltvlmlpenf
      241 qgeqipgday fqfrslkvls iaygelrgsi spwllgcggl qfldlltnhl tgtitcftwi
      301 cqtihsqvry qkg
//
LOCUS       XP_016715564             123 aa            linear   PLN 06-AUG-2024
DEFINITION  INO80 complex subunit C [Gossypium hirsutum].
ACCESSION   XP_016715564
VERSION     XP_016715564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="INO80 complex subunit C"
                     /calculated_mol_wt=14316
     Region          <29..123
                     /region_name="YL1_C"
                     /note="YL1 nuclear protein C-terminal domain; cl02154"
                     /db_xref="CDD:470478"
     CDS             1..123
                     /gene="LOC107928800"
                     /coded_by="XM_016860075.2:95..466"
                     /db_xref="GeneID:107928800"
ORIGIN      
        1 meaevikael vlpthmsfkr iqmyekypkg qskvrwkqlk qilqaencqn yspdepnyvn
       61 iesppsmqpc kricditgfe apyhdprtnl ryanadvfkl vrslpneyvq rylalrkaav
      121 vlr
//
LOCUS       XP_016715631             661 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715631
VERSION     XP_016715631.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715631.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..661
                     /product="uncharacterized protein"
                     /calculated_mol_wt=73386
     Region          62..124
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(91..93,101,104..105,108..109)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..661
                     /gene="LOC107928870"
                     /coded_by="XM_016860142.2:301..2286"
                     /db_xref="GeneID:107928870"
ORIGIN      
        1 mddgntteae rwltiaakll asgdfhgtrt fairaresap vladqilavt dtlltaqsnp
       61 rdwygilqlv pltqsmevve sqyrklaill npvkntlsfa dqafrfvsea wnvlsnpsnk
      121 liydnelrfl qfghvsqlgq qhyqqeqpqv qqpqpqtqtl fmqqppppke tqtlfmqtpl
      181 ketqaqvtqs lfvrsprdsn sdgnatlegg eqlgltnyss estwtrqinq tgltqpsqin
      241 qtgsvgssqi swpeptrtsq inqpeavgan qinqteltrm dqinhsaapa paptptptpt
      301 tptkensrve ptgasqetns aqasqatele gstfwtacph cysrfeypkm yenctlrcqt
      361 kdcrkafhav vipsppvqte ptdvsranqa ieseeptfwt acpycytlce ylklyedctl
      421 rcqtkncrra fhavvipppp mngkdtyics wgffpiglsr ngnfpnwspi stvfacpdnk
      481 nagkqmntnk sspklfydeq dvyveisdss mssenedddd dwrnekrekk vnnskgkgsr
      541 gryakkpqse rvkqggddqv sadhggnssg asmvpdsvst aessrrkqmk rgtkvlgkld
      601 lnvefrneae epvagrskgn dagneeednn egngffegld effsslpils vvgddkvkas
      661 e
//
LOCUS       XP_016715632             306 aa            linear   PLN 06-AUG-2024
DEFINITION  phytolongin Phyl1.1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715632
VERSION     XP_016715632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="phytolongin Phyl1.1 isoform X1"
                     /calculated_mol_wt=34883
     Region          40..>123
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     Region          <247..300
                     /region_name="Synaptobrevin"
                     /note="pfam00957"
                     /db_xref="CDD:395764"
     CDS             1..306
                     /gene="LOC107928871"
                     /coded_by="XM_016860143.2:146..1066"
                     /db_xref="GeneID:107928871"
ORIGIN      
        1 mrnfilefey faedlcwyff eafdivaeef iaffqntvhy ccvskanrtl yeysrgdhei
       61 enmaalcler tmsfhkwyfe tigkwtfgfl fedgcvyfai adkavenhgv lrflqhmrde
      121 fktlarkgsr ssfsgmssig veeqlvpviq rlitsleqvs hsdndwktkv pvsdypshsp
      181 sssnknakle aasstkapll gksskqekkn kdhivavrdi eleehrkstd rvktdsttld
      241 psnqngasss itlqkdlgst rirpgsqnmr kkwcrqvriv laidvaiclv llviwlsicn
      301 gisctr
//
LOCUS       XP_016715635             276 aa            linear   PLN 06-AUG-2024
DEFINITION  phytolongin Phyl1.1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715635
VERSION     XP_016715635.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860146.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..276
                     /product="phytolongin Phyl1.1 isoform X2"
                     /calculated_mol_wt=30975
     Region          10..>93
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     Region          <217..270
                     /region_name="Synaptobrevin"
                     /note="pfam00957"
                     /db_xref="CDD:395764"
     CDS             1..276
                     /gene="LOC107928871"
                     /coded_by="XM_016860146.2:360..1190"
                     /db_xref="GeneID:107928871"
ORIGIN      
        1 mgsiqntvhy ccvskanrtl yeysrgdhei enmaalcler tmsfhkwyfe tigkwtfgfl
       61 fedgcvyfai adkavenhgv lrflqhmrde fktlarkgsr ssfsgmssig veeqlvpviq
      121 rlitsleqvs hsdndwktkv pvsdypshsp sssnknakle aasstkapll gksskqekkn
      181 kdhivavrdi eleehrkstd rvktdsttld psnqngasss itlqkdlgst rirpgsqnmr
      241 kkwcrqvriv laidvaiclv llviwlsicn gisctr
//
LOCUS       XP_016715634             276 aa            linear   PLN 06-AUG-2024
DEFINITION  phytolongin Phyl1.1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715634
VERSION     XP_016715634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860145.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..276
                     /product="phytolongin Phyl1.1 isoform X2"
                     /calculated_mol_wt=30975
     Region          10..>93
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     Region          <217..270
                     /region_name="Synaptobrevin"
                     /note="pfam00957"
                     /db_xref="CDD:395764"
     CDS             1..276
                     /gene="LOC107928871"
                     /coded_by="XM_016860145.2:362..1192"
                     /db_xref="GeneID:107928871"
ORIGIN      
        1 mgsiqntvhy ccvskanrtl yeysrgdhei enmaalcler tmsfhkwyfe tigkwtfgfl
       61 fedgcvyfai adkavenhgv lrflqhmrde fktlarkgsr ssfsgmssig veeqlvpviq
      121 rlitsleqvs hsdndwktkv pvsdypshsp sssnknakle aasstkapll gksskqekkn
      181 kdhivavrdi eleehrkstd rvktdsttld psnqngasss itlqkdlgst rirpgsqnmr
      241 kkwcrqvriv laidvaiclv llviwlsicn gisctr
//
LOCUS       XP_016715636             261 aa            linear   PLN 06-AUG-2024
DEFINITION  14-3-3-like protein [Gossypium hirsutum].
ACCESSION   XP_016715636
VERSION     XP_016715636.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860147.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715636.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="14-3-3-like protein"
                     /calculated_mol_wt=29199
     Region          7..244
                     /region_name="14-3-3"
                     /note="14-3-3 domain; cl02098"
                     /db_xref="CDD:470464"
     Site            order(13,16..17,19..20,22,25,65,68,72,87,91,94..95,98)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206755"
     Site            order(56,63,129,136..137,178,181..182,185,188..189,226,
                     229,232..233)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206755"
     CDS             1..261
                     /gene="LOC107928873"
                     /coded_by="XM_016860147.2:141..926"
                     /db_xref="GeneID:107928873"
ORIGIN      
        1 maatspreen vykaklaeqa eryeemvkfm etvvssvvap deltveernl lsvayknvig
       61 arraswrivs sieqkeegrg nadhvsiire yrakieaels eicagilkll eeklvpaagn
      121 gdskvfylkm kgdyhrylae fktgddrkaa aentlsayks aqdiavsela pthpirlgla
      181 lnfsvfyyei lnspdracsl akqafdeais eldtlgedsy kdstlimqll rdnltlwtsd
      241 mqedgteeik easkpedekq q
//
LOCUS       XP_016715602             375 aa            linear   PLN 06-AUG-2024
DEFINITION  metacaspase-1 [Gossypium hirsutum].
ACCESSION   XP_016715602
VERSION     XP_016715602.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715602.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..375
                     /product="metacaspase-1"
                     /calculated_mol_wt=41352
     Region          99..350
                     /region_name="Peptidase_C14"
                     /note="Caspase domain; pfam00656"
                     /db_xref="CDD:425803"
     CDS             1..375
                     /gene="LOC107928838"
                     /coded_by="XM_016860113.2:10..1137"
                     /db_xref="GeneID:107928838"
ORIGIN      
        1 mvikivclrc rqkltapaya ekitcpqcge lnpiikkpsp atsreqgkiv ppligksmek
       61 lrklllgntq rlsgssgsss sppsklcald hsvnqlpakk ravlcgvsyk kwkyklkgti
      121 ndvmnmktll tqtygflern ilvlteeesd trliptkani enclkwlvng cqkgdslvfy
      181 ysghglrqpd fnddeldgfd eticpvdflr egmivdndiy ativkplseg vtlhaivdac
      241 hsgtildleh vyerdkgkwi dnrppsgvrk ktsggiaysi sacednqvaa dtsalnsntm
      301 ngamtyilid vvrgnpdity gdlldqietr iedanqqgcf ggsrilsklf gpnlsqkpll
      361 saseefpvye rkfkl
//
LOCUS       XP_016715555             348 aa            linear   PLN 06-AUG-2024
DEFINITION  metacaspase-3 [Gossypium hirsutum].
ACCESSION   XP_016715555
VERSION     XP_016715555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860066.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..348
                     /product="metacaspase-3"
                     /calculated_mol_wt=38877
     Region          83..337
                     /region_name="Peptidase_C14"
                     /note="Caspase domain; pfam00656"
                     /db_xref="CDD:425803"
     CDS             1..348
                     /gene="LOC107928796"
                     /coded_by="XM_016860066.2:83..1129"
                     /db_xref="GeneID:107928796"
ORIGIN      
        1 marrercsgc ginmlvspea rvvrcsecht ltnlvpinar pgrtrynglp rmhenpygng
       61 pspqhpqypq prpslspvpi ygrkrallcg vnyhgksykl kgsindvkgm kyllvetlgf
      121 pndsilmlte nerepskipt kqnirkalkw lvygcqpgds lvfhfsghgt rqkdynhdev
      181 dgfdealcpl dhetegniid deindtivkp ltrgttlhai idacysgtvl dlpfvcrmnk
      241 egryawedqr nplfykrtsg glafcfsacd dhqtsadtta ftgtnvrtga mtysfvqaiq
      301 nerrltyghl lnamrytigd vskahgasqe pqltssdkfd iyskpvvl
//
LOCUS       XP_016715732             670 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pumilio homolog 7, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016715732
VERSION     XP_016715732.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715732.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..670
                     /product="putative pumilio homolog 7, chloroplastic"
                     /calculated_mol_wt=75013
     Region          354..664
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(402..403,406,441..442,445,479,482,514..515,518,
                     547..548,550..551,554,583..584,586..587,590,621..622,
                     624..625,628,658,661)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..670
                     /gene="LOC107928934"
                     /coded_by="XM_016860243.2:532..2544"
                     /db_xref="GeneID:107928934"
ORIGIN      
        1 mlestaeign mkddeefeml ldeiphatsh nhhhhhhqhe rknhvngslh gmygngfmyd
       61 ddpsssylhn rtcvspvsgf sllsdgssss lfshngqsfs dhgspppple dfkphlfgel
      121 dlcrnfskly isndqenlgs sfrdfslesn giqrfdqfnv ekhgvcdtlr kgfsefmpls
      181 fnggmafsgl phnllgpqmy pqgmgcwngt mrspwqnkdq acnvlnlsps lsngelivhg
      241 sprpvrnmln qgmplsngla rprahsnvga fsnedsfiiq gdglnyvmin kgldcsrgln
      301 kakdigaskh regrlqldnw sqfapacgns knaaklctsf slppkynsla eargyiylia
      361 kdqhgcrflq rlfdegtred vemifkeiid hvvelmmnpf gnylmqklle vcneqqrmqi
      421 llmateepgq lvrislnthg trvvqkliet lktrqqislv vsalepgfls likdlngnhv
      481 vqrclqclsc ednkfifiaa akycvdiath qrgccvlqrc ishstgeyrd nlveeissng
      541 lllaqdaygn yvvqfilelk ipsatstlis qfegnyvhls sqkfsshvve kclmvlndes
      601 rsklihells tahferllqd phanyvvqta lrvsegslhn slveaieshk aisrnspysk
      661 rilsqkllkk
//
LOCUS       XP_016715620             369 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase 1 [Gossypium hirsutum].
ACCESSION   XP_016715620
VERSION     XP_016715620.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860131.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="GDSL esterase/lipase 1"
                     /calculated_mol_wt=41322
     Region          41..348
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(48,123,177,329,332)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(48,329,332)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(48,123,177)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..369
                     /gene="LOC107928857"
                     /coded_by="XM_016860131.2:37..1146"
                     /db_xref="GeneID:107928857"
ORIGIN      
        1 mmaksiscqc icfflsvvfi fvnlischnn kielrhenhv alfifgdsll dngnnnyist
       61 ildfranfwp ygetffnypt grfsdgrlip dfiaqfaglp lippylkpgn pefrngvnfa
      121 sagagallet hqglvvdlgt qikyfkkvet slrqelgvak aknllskavy ligiggndyl
      181 tknstmvsne efvsmvignl tlavkeiykk ggrkfgfmem mplgclpyik aqnggccing
      241 itqlaelhns gfpkalnelk eklnglkyah ynffesvser lnnpskygfk dataccgyge
      301 grgvyscggk rgitefilce npddylffda yhfsekayrq faklmwsgti divwpynfkt
      361 lfqandqmf
//
LOCUS       XP_016715575             324 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase N1 [Gossypium hirsutum].
ACCESSION   XP_016715575
VERSION     XP_016715575.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860086.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..324
                     /product="peroxidase N1"
                     /calculated_mol_wt=35112
     Region          7..324
                     /region_name="PLN03030"
                     /note="cationic peroxidase; Provisional"
                     /db_xref="CDD:215545"
     CDS             1..324
                     /gene="LOC107928809"
                     /coded_by="XM_016860086.2:121..1095"
                     /db_xref="GeneID:107928809"
ORIGIN      
        1 mepsyifltm avtllsmppt gfgqgttrvg fysktcprae sivkstvesh frsnpaiapg
       61 llrmhfhdcf vngcdgsvli dgpnterkav qnsllrgfdv ideakaklea acpgvvscad
      121 ilalaardsv vltkginwkv ptgrrdgkls lqsdaaklpg ftdsiesqkq qfarfglntq
      181 dlvtlvgght igtaaclvfn yrlnnftngg pdptinpsfl pqlrslcpqn gnnfrrvdld
      241 tgsankfdts fftnlkngrg vlesdqklwt dastrtfvqq flgekgvrkl nfgkefaksm
      301 vkmsnigvkt gsnseirrvc sain
//
LOCUS       XP_016715710             435 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715710
VERSION     XP_016715710.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860221.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715710.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..435
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46685
     Region          71..389
                     /region_name="Hyccin"
                     /note="pfam09790"
                     /db_xref="CDD:462903"
     CDS             1..435
                     /gene="LOC107928923"
                     /coded_by="XM_016860221.2:170..1477"
                     /db_xref="GeneID:107928923"
ORIGIN      
        1 mdfhrnpstn sassstssts saaahhqppp ssatdndpmh swwesvskqr srilslaall
       61 psggvavssl adsdrpavsl lsspfaysli ssalsspksg sgsdrlcqwl yetfqssdph
      121 lrllvlsflp llsgiylsrv hssdssslps lagfeavlla vysseaksra gkpllvqipd
      181 lsqpslyhap rnkpvddrsr qsvgvlsppl ephlavkstk raiivgtald cyykqvsqmp
      241 awskldfckf aaawagqdcp crtkldrded nhhengnvng ighirllred sgfsngtrsg
      301 dgdevdyedd vikevvvvem ntlgineenl etkgvriplp wellrpvvti lghclfgpln
      361 sqdvkdsasv avrclyaras hdlapqaila lqslirldkn araaattaat vttnassnan
      421 tpskakkpei llvsk
//
LOCUS       XP_016715637             583 aa            linear   PLN 06-AUG-2024
DEFINITION  putative clathrin assembly protein At1g03050 [Gossypium hirsutum].
ACCESSION   XP_016715637
VERSION     XP_016715637.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860148.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715637.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="putative clathrin assembly protein At1g03050"
                     /calculated_mol_wt=65293
     Region          32..306
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     Site            order(39,49,51..52)
                     /site_type="other"
                     /note="putative PtdIns(4,5)P2-binding site [chemical
                     binding]"
                     /db_xref="CDD:340784"
     CDS             1..583
                     /gene="LOC107928874"
                     /coded_by="XM_016860148.2:250..2001"
                     /db_xref="GeneID:107928874"
ORIGIN      
        1 mapskirral ghvkdqtsis lakvggstsl sdldvaivka trheeypaee rhireiltlt
       61 sysrayvsac vntlsrrlnk tknwtvalkt lilihrllte gdptyeqeif fstrrgtril
      121 nmsdfrdtsr snswdfsafv rtfalyides lefrmqgknt krnvykceed fgedynnslv
      181 avkptpvnem kteqlfqrmq qlqqllerfl acrptgeakc nrvvtvalyp ivkesfnlyy
      241 ditetmgali drfmevdmtd tvkiyeifcr qskqfdelea fyswcrsigi arpsefpeie
      301 kitqkkldll delildksal aqgnvnrdep erepeikele pepepeedin aikalppppe
      361 nffeeeekve ddiskaivvq qevdflnlge namssedhad klalalfdga vpaatsagsg
      421 wdtlkadagw etalvqsasi lnnlkptlgg gfdhllldgm yqqgqmmaav tssaatgsas
      481 svafgsagrs aatlalpapp ssngnknnep vavdpfaasl tvappsyvqm sdmekkqkll
      541 meeqvmwdqf krngmrggnv avsnvqqqty pynqggwyth nyy
//
LOCUS       XP_016715621             214 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar iron transporter homolog 2 [Gossypium hirsutum].
ACCESSION   XP_016715621
VERSION     XP_016715621.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860132.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715621.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..214
                     /product="vacuolar iron transporter homolog 2"
                     /calculated_mol_wt=22225
     Region          32..>152
                     /region_name="CCC1_like"
                     /note="CCC1-related family of proteins; cl00278"
                     /db_xref="CDD:469703"
     CDS             1..214
                     /gene="LOC107928858"
                     /coded_by="XM_016860132.2:80..724"
                     /db_xref="GeneID:107928858"
ORIGIN      
        1 malsihvngg teqkqfqepi enpefdysqr gqwlraavlg andglvsvss llmgvgsvkq
       61 dvkamvlagf aglvagacsm aigefvsvyt qrdvemaqmk rdgekrspvv dendrrmekk
      121 erlpspglaa gasalafsvg avlpllaaaf irdhkvrmav vvvvasvalm vfgvvgallg
      181 gapvaksggr vlvggwiamg itfgltrlig lngm
//
LOCUS       XP_016715629              87 aa            linear   PLN 06-AUG-2024
DEFINITION  EC protein homolog [Gossypium hirsutum].
ACCESSION   XP_016715629
VERSION     XP_016715629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..87
                     /product="EC protein homolog"
                     /calculated_mol_wt=8374
     Region          14..>65
                     /region_name="Metallothio_PEC"
                     /note="Plant PEC family metallothionein; pfam02068"
                     /db_xref="CDD:396582"
     CDS             1..87
                     /gene="LOC107928868"
                     /coded_by="XM_016860140.2:81..344"
                     /db_xref="GeneID:107928868"
ORIGIN      
        1 madskvevrg fatcndkcgc pspcpggttc scgageadhk rcscgehcgc npctcsqaea
       61 aggsgtgkmy ckcgagctca tcatcan
//
LOCUS       XP_016715778             379 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715778
VERSION     XP_016715778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860289.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..379
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41419
     CDS             1..379
                     /gene="LOC107928972"
                     /coded_by="XM_016860289.2:1306..2445"
                     /db_xref="GeneID:107928972"
ORIGIN      
        1 malsapstli shnravncla fslpklgnla vnhqqlhsrv nfhsfsdppy vhqcrnggif
       61 ppsclaktvv sdvgvhnsdf ttdaaaddtw sefaknvsge wdgfgadfti egtpielpes
      121 vvpeayrewe vkvydwqtqc ptlaepvent mtyktikllp tvgceadaat rysieeknig
      181 gvdnevsafa yhssgcytai wsvadknlle lehclinprd resrvriiqv vrvdgtkfvl
      241 qnvrvfceqw ygpfrngdql ggcairdsaf astaatnasd vggvwkgsna aasfdssgdn
      301 fleelkangv mksirdgsnl illpkqlwcs lmdsggetci evgwlydqgy aitsrccfsr
      361 egklkevsia rettvlegv
//
LOCUS       XP_016715775             560 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamate--tRNA ligase, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016715775
VERSION     XP_016715775.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860286.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715775.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..560
                     /product="glutamate--tRNA ligase,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=62377
     Region          1..534
                     /region_name="PLN02627"
                     /note="glutamyl-tRNA synthetase"
                     /db_xref="CDD:178234"
     CDS             1..560
                     /gene="LOC107928970"
                     /coded_by="XM_016860286.2:80..1762"
                     /db_xref="GeneID:107928970"
ORIGIN      
        1 maalvagtpw mrirvipefa ppfifrrhfr rnfsvrasid sdapvrvrfa psptgnlhvg
       61 gartalfnyl farskggkfv lriedtdler streseeavl rdlawlgldw degpgvggdy
      121 gpyrqserna mykqyaekll esghvyrcfc sneelekmke iaelkklppv ysgkwataad
      181 geveeelakg tpytyrfrvp kegslkindl irgkvswkld tlgdfvimrs ngqpvynfcv
      241 tvddatmais hviraeehlp ntlrqaliyk algfpmpsfa hvslilapdr sklskrhgat
      301 svgqyrdmgy lpqamvnyla llgwgdgten efftidqlve kfsigrvnks gavfdstklr
      361 wmngqhlrai pfeelsqlig erwkstgllt esegpfvdda vqllkdgidl vtdsdtalsn
      421 llsypvhatl tspegrpive dklsefsahl laaydsgelf gvleeglagw qkwvkgfgkt
      481 lkrkgkslfm plrvlltgkl hgpdmgssvi liykagnhgi vspqagfvtl kerfgilrql
      541 dwealnqdhp alesaatisn
//
LOCUS       XP_016715643             499 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase 19 [Gossypium hirsutum].
ACCESSION   XP_016715643
VERSION     XP_016715643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860154.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..499
                     /product="histone deacetylase 19"
                     /calculated_mol_wt=56127
     Region          17..395
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
     Site            order(149,184,186,188,270,272,309)
                     /site_type="active"
                     /db_xref="CDD:212513"
     Site            order(184,186,272)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:212513"
     CDS             1..499
                     /gene="LOC107928880"
                     /coded_by="XM_016860154.2:275..1774"
                     /db_xref="GeneID:107928880"
ORIGIN      
        1 mdtggnslps gpdgvkrkvs yfydpevgny yygqghpmkp hrirmthall ahygllqnmq
       61 vykplparer dlcrfhaddy vnflrsitpe tqqdqlrqlk rfnvgedcpv fdglfsfcqt
      121 yaggsvggav klnhnicdia inwagglhha kkceasgfcy vndivlaile llkqhqrvly
      181 vdidihhgdg veeafytsdr vmtvsfhkfg dyfpgtgdir digyskgkyy slnvplddgi
      241 ddesyhflfk piigkvmevf kpgavvlqcg adslsgdrlg cfnlsikgha ecvkfmrsfn
      301 vpllllgggg ytirnvarcw cyetgvalgt evddqlpqhe yyeyfgpdyt lhvapsnmen
      361 kntrqlleei rnnlldnlsk lqhapsvqfq erppdtelpe adedqddade rwdpdsdmev
      421 dekrpipsrv kreaieperk dseapkgtae qargfdnmat netlstksvd vrpmaidept
      481 vkveqetsnk asdpiypks
//
LOCUS       XP_016715645             499 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase 19 [Gossypium hirsutum].
ACCESSION   XP_016715645
VERSION     XP_016715645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..499
                     /product="histone deacetylase 19"
                     /calculated_mol_wt=56127
     Region          17..395
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
     Site            order(149,184,186,188,270,272,309)
                     /site_type="active"
                     /db_xref="CDD:212513"
     Site            order(184,186,272)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:212513"
     CDS             1..499
                     /gene="LOC107928880"
                     /coded_by="XM_016860156.2:216..1715"
                     /db_xref="GeneID:107928880"
ORIGIN      
        1 mdtggnslps gpdgvkrkvs yfydpevgny yygqghpmkp hrirmthall ahygllqnmq
       61 vykplparer dlcrfhaddy vnflrsitpe tqqdqlrqlk rfnvgedcpv fdglfsfcqt
      121 yaggsvggav klnhnicdia inwagglhha kkceasgfcy vndivlaile llkqhqrvly
      181 vdidihhgdg veeafytsdr vmtvsfhkfg dyfpgtgdir digyskgkyy slnvplddgi
      241 ddesyhflfk piigkvmevf kpgavvlqcg adslsgdrlg cfnlsikgha ecvkfmrsfn
      301 vpllllgggg ytirnvarcw cyetgvalgt evddqlpqhe yyeyfgpdyt lhvapsnmen
      361 kntrqlleei rnnlldnlsk lqhapsvqfq erppdtelpe adedqddade rwdpdsdmev
      421 dekrpipsrv kreaieperk dseapkgtae qargfdnmat netlstksvd vrpmaidept
      481 vkveqetsnk asdpiypks
//
LOCUS       XP_016715729             849 aa            linear   PLN 06-AUG-2024
DEFINITION  katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715729
VERSION     XP_016715729.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860240.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715729.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..849
                     /product="katanin p80 WD40 repeat-containing subunit B1
                     homolog KTN80.4 isoform X1"
                     /calculated_mol_wt=93184
     Region          9..260
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(15,34,38,44..45,57..58,76,80,86..87,99..100,117,122,
                     128..129,142,159,164,170..171,183..184,202,206,212..213,
                     225..226,243,248,253..254)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          63..99
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          104..140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          147..182
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          687..845
                     /region_name="Katanin_con80"
                     /note="con80 domain of Katanin; pfam13925"
                     /db_xref="CDD:464044"
     CDS             1..849
                     /gene="LOC107928933"
                     /coded_by="XM_016860240.2:522..3071"
                     /db_xref="GeneID:107928933"
ORIGIN      
        1 mstkrayklq efvahsssvn clkigrkssr vlvtggedhk vnlwaiskpn ailnlsghts
       61 gidsvtfdss evlvaagaas gtiklwdlee akivrtltgh rsncisvdfh pfgeffasgs
      121 ldtnlkiwdi rkkgcihtyk ghtrgvnair ftpdgrwvvs ggednivkvw dltagkllhq
      181 fkdhegqiqc ldfhphefll atgsadrtvk fwdletfeli gsagpetagv rcltfnpdgr
      241 tvlcglhenl kvfswepirc ydgvdvgwsr lsdlnvhegk llgcsynqsc vgvwvvdisr
      301 iepyavgnak rvnghsepks hsggnlsvln enntkasmgr lpvsqnpdpl vketkslgrl
      361 sisqnsdpak eskttgnapg tphrvnlnaa rktaqqrsvt vprrsstran savtvptfsk
      421 sdvvpvlvpr ndmrseqaae lrkevgiser sleqvtesrr evgitgrsle ssqsaaesrk
      481 eagivgrtle qgadsrkelg ivgrtmpfsl qsktssfrkf qnsredldwp aisaplenag
      541 srvefssgsd rstlpsvkgp ingmsaaemn vredrcigsv rtepnsvvel pssyrdenyd
      601 aqvqkshrda yplesqkggr trsvilnlek rrrsnfdgpt lcasarnasv anmpsfdvyk
      661 qrrrysssve kempsatded avadvmeqhd qfigsmqsrl aklqvvhrlw erndvkgais
      721 amekmsdhgv ladvmsivte kidivtleic tsllpllsgl lgsdmdrhls icldmllklv
      781 rifgsmiyst lsalapagvd ieaeqrferc nlcyielekv kqclptltrr ggsvaksaqe
      841 lnlalqevs
//
LOCUS       XP_016715730             848 aa            linear   PLN 06-AUG-2024
DEFINITION  katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715730
VERSION     XP_016715730.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860241.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715730.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..848
                     /product="katanin p80 WD40 repeat-containing subunit B1
                     homolog KTN80.4 isoform X2"
                     /calculated_mol_wt=93028
     Region          9..260
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(15,34,38,44..45,57..58,76,80,86..87,99..100,117,122,
                     128..129,142,159,164,170..171,183..184,202,206,212..213,
                     225..226,243,248,253..254)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          63..99
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          104..140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          147..182
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          687..844
                     /region_name="Katanin_con80"
                     /note="con80 domain of Katanin; pfam13925"
                     /db_xref="CDD:464044"
     CDS             1..848
                     /gene="LOC107928933"
                     /coded_by="XM_016860241.2:523..3069"
                     /db_xref="GeneID:107928933"
ORIGIN      
        1 mstkrayklq efvahsssvn clkigrkssr vlvtggedhk vnlwaiskpn ailnlsghts
       61 gidsvtfdss evlvaagaas gtiklwdlee akivrtltgh rsncisvdfh pfgeffasgs
      121 ldtnlkiwdi rkkgcihtyk ghtrgvnair ftpdgrwvvs ggednivkvw dltagkllhq
      181 fkdhegqiqc ldfhphefll atgsadrtvk fwdletfeli gsagpetagv rcltfnpdgr
      241 tvlcglhenl kvfswepirc ydgvdvgwsr lsdlnvhegk llgcsynqsc vgvwvvdisr
      301 iepyavgnak rvnghsepks hsggnlsvln enntkasmgr lpvsqnpdpl vketkslgrl
      361 sisqnsdpak eskttgnapg tphrvnlnaa rktaqqrsvt vprrsstran savtvptfsk
      421 sdvvpvlvpr ndmrseqaae lrkevgiser sleqvtesrr evgitgrsle ssqsaaesrk
      481 eagivgrtle qgadsrkelg ivgrtmpfsl qsktssfrkf qnsredldwp aisaplenag
      541 srvefssgsd rstlpsvkgp ingmsaaemn vredrcigsv rtepnsvvel pssyrdenyd
      601 aqvqkshrda yplesqkggr trsvilnlek rrrsnfdgpt lcasarnasv anmpsfdvyk
      661 qrrrysssve kempsatded avadvmeqhd qfigsmqsrl aklqvvhrlw erndvkgais
      721 amekmsdhgv ladvmsivte kidivtleic tsllpllsgl lgsdmdrhls icldmllklv
      781 rifgsmiyst lsalapagvd ieaeqrferc nlcyielekv kqclptltrg gsvaksaqel
      841 nlalqevs
//
LOCUS       XP_040942574             816 aa            linear   PLN 06-AUG-2024
DEFINITION  katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942574
VERSION     XP_040942574.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086640.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..816
                     /product="katanin p80 WD40 repeat-containing subunit B1
                     homolog KTN80.4 isoform X3"
                     /calculated_mol_wt=89691
     Region          9..260
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(15,34,38,44..45,57..58,76,80,86..87,99..100,117,122,
                     128..129,142,159,164,170..171,183..184,202,206,212..213,
                     225..226,243,248,253..254)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          63..99
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          104..140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          147..182
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          654..812
                     /region_name="Katanin_con80"
                     /note="con80 domain of Katanin; pfam13925"
                     /db_xref="CDD:464044"
     CDS             1..816
                     /gene="LOC107928933"
                     /coded_by="XM_041086640.1:516..2966"
                     /db_xref="GeneID:107928933"
ORIGIN      
        1 mstkrayklq efvahsssvn clkigrkssr vlvtggedhk vnlwaiskpn ailnlsghts
       61 gidsvtfdss evlvaagaas gtiklwdlee akivrtltgh rsncisvdfh pfgeffasgs
      121 ldtnlkiwdi rkkgcihtyk ghtrgvnair ftpdgrwvvs ggednivkvw dltagkllhq
      181 fkdhegqiqc ldfhphefll atgsadrtvk fwdletfeli gsagpetagv rcltfnpdgr
      241 tvlcglhenl kvfswepirc ydgvdvgwsr lsdlnvhegk llgcsynqsc vgvwvvdisr
      301 iepyavgnak rvnghsepks hsggnlsvln enntkasmgr lpvsqnpdpl vketkslgrl
      361 sisqnsdpak eskttgnapg tphrvnlnaa rktaqqrndm rseqaaelrk evgisersle
      421 qvtesrrevg itgrslessq saaesrkeag ivgrtleqga dsrkelgivg rtmpfslqsk
      481 tssfrkfqns redldwpais aplenagsrv efssgsdrst lpsvkgping msaaemnvre
      541 drcigsvrte pnsvvelpss yrdenydaqv qkshrdaypl esqkggrtrs vilnlekrrr
      601 snfdgptlca sarnasvanm psfdvykqrr rysssvekem psatdedava dvmeqhdqfi
      661 gsmqsrlakl qvvhrlwern dvkgaisame kmsdhgvlad vmsivtekid ivtleictsl
      721 lpllsgllgs dmdrhlsicl dmllklvrif gsmiystlsa lapagvdiea eqrfercnlc
      781 yielekvkqc lptltrrggs vaksaqelnl alqevs
//
LOCUS       XP_016715784             303 aa            linear   PLN 06-AUG-2024
DEFINITION  phytochrome-associated serine/threonine-protein phosphatase
            [Gossypium hirsutum].
ACCESSION   XP_016715784
VERSION     XP_016715784.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715784.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..303
                     /product="phytochrome-associated serine/threonine-protein
                     phosphatase"
                     /calculated_mol_wt=34769
     Region          2..285
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(44,60,63..64,66..67,69,71..72,84,99..103,114..115,
                     118..119,123..124,127..128,136,262,271,281)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(50,52,78,82,110..111,115..116,120,160,182..184,193,
                     206..208,234,236,261..263)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(50,52,78,110,160,234)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..303
                     /gene="LOC107928977"
                     /coded_by="XM_016860295.2:246..1157"
                     /db_xref="GeneID:107928977"
ORIGIN      
        1 mdldqwiskv kegqhllede lqllceyike ilieesnvqp inspvtvcgd ihgqfhdlmk
       61 lfrtgghvpe tnyifmgdfv drgynslevf tillllkary panitllrgn hesrqltqvy
      121 gfydecqrky gnanawryct dvfdyltlsa iidgtvlcvh gglspdvrti dqirvidrnc
      181 eiphegpfcd lmwsdpedie twavsprgag wlfgsrvtse fnhinnldlv crahqlvqeg
      241 lkymfqdkgl vtvwsapnyc yrcgnvasil sfnenmerev kffteteenn qmrgprsgvp
      301 yfl
//
LOCUS       XP_040942575             745 aa            linear   PLN 06-AUG-2024
DEFINITION  probable RNA helicase SDE3 [Gossypium hirsutum].
ACCESSION   XP_040942575
VERSION     XP_040942575.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086641.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..745
                     /product="probable RNA helicase SDE3"
                     /calculated_mol_wt=82221
     Region          508..740
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..745
                     /gene="LOC107928913"
                     /coded_by="XM_041086641.1:353..2590"
                     /db_xref="GeneID:107928913"
ORIGIN      
        1 mscfleilkc ilccededig iidnrtssrd afsrtdntyh rsssigesyr ssqtwsypts
       61 slssspgnew lynihsstts tkpsqssvkp vlyppsplps fktsftaqkp spspkgltpp
      121 ksttpspkps sssskpcpsl kptlselgkg kykavypkda lpiymipkdi edlikrdivp
      181 evlgltspkp ttpspkpsss sfkpspslkp tlselgkgky ktlnpedtlp ikpvlyppsp
      241 lpsfktsfta qkpspsskgl tppksttpsp rpssssskpc pslkptlsel gkgkyktvdp
      301 kdtlpiyiip kaiedlikrd ivpkvlkkpl sastyrdffa allyaedsyi ekwgsfalen
      361 vpmelhsati yqksggnkhs kasekmddkt favfkvdsls ntqpfllsrd fvfakrvgke
      421 tkpfqgviyr vvkstsilve fgeefhsqhd stcrynisfs fnrvclkrah qaiaaasasl
      481 igkflfpdsf sqhpmhnsey ynlydrnlnl deksavhril niqgpppflv kgplcttfng
      541 nsesiskqls rtglvvkeav lqtyrrhpqs kilvcapins tcdvltrslk idipasdifr
      601 anaafreieg vpidilpscl ykrdaecfsc pslhklrefr vifstfassy rlynagisag
      661 hfshiflvda ssatepetlv alanfaddst tvivtgapgn rsstvrsdia rqkglrisyf
      721 erlyklspfk nddpmfiaql kdrsl
//
LOCUS       XP_016715694             483 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016715694
VERSION     XP_016715694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="tRNA (guanine(10)-N2)-methyltransferase homolog
                     isoform X1"
                     /calculated_mol_wt=54888
     Region          207..419
                     /region_name="Trm11"
                     /note="tRNA G10 N-methylase Trm11 [Translation, ribosomal
                     structure and biogenesis]; COG1041"
                     /db_xref="CDD:440663"
     CDS             1..483
                     /gene="LOC107928916"
                     /coded_by="XM_016860205.2:738..2189"
                     /db_xref="GeneID:107928916"
ORIGIN      
        1 mwylcvfyhr lldyripefe sladlfgafg dkrssdfntq dkvlqwrlpk hhhpdspfhf
       61 vhlpyedvar kianrsilvk giyelwgegn dfeeleeavk sypderklpy leyestfkit
      121 vdsfgkvlsl qeqneriqgl syipfkgrvn lknpdhnfwl metdenetnn glppvvkrri
      181 ffgreigvad rklipmyqlk trnylgptam daemaflman qaqaapgklv ydpfvgtgsi
      241 lvsaahfgam tmgadidirv vrdgrgpdcn vwsnfkqygl pmpigllrad nnlppwrpgl
      301 kevfdgiicd ppygvraggr ksggrkllkg ivspytvpdd kradhipsta aytlvecvhd
      361 lldlaarmli mggrlvffyp vlredgsvet hfpehpcfkl vatseqmlss rysrvlltmv
      421 ktslyteela laarikhlef renhlkwlen gnlhssvfsp adaesgdskv skesklkyrg
      481 kyv
//
LOCUS       XP_016715695             470 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016715695
VERSION     XP_016715695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860206.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="tRNA (guanine(10)-N2)-methyltransferase homolog
                     isoform X2"
                     /calculated_mol_wt=53318
     Region          207..419
                     /region_name="Trm11"
                     /note="tRNA G10 N-methylase Trm11 [Translation, ribosomal
                     structure and biogenesis]; COG1041"
                     /db_xref="CDD:440663"
     CDS             1..470
                     /gene="LOC107928916"
                     /coded_by="XM_016860206.2:358..1770"
                     /db_xref="GeneID:107928916"
ORIGIN      
        1 mwylcvfyhr lldyripefe sladlfgafg dkrssdfntq dkvlqwrlpk hhhpdspfhf
       61 vhlpyedvar kianrsilvk giyelwgegn dfeeleeavk sypderklpy leyestfkit
      121 vdsfgkvlsl qeqneriqgl syipfkgrvn lknpdhnfwl metdenetnn glppvvkrri
      181 ffgreigvad rklipmyqlk trnylgptam daemaflman qaqaapgklv ydpfvgtgsi
      241 lvsaahfgam tmgadidirv vrdgrgpdcn vwsnfkqygl pmpigllrad nnlppwrpgl
      301 kevfdgiicd ppygvraggr ksggrkllkg ivspytvpdd kradhipsta aytlvecvhd
      361 lldlaarmli mggrlvffyp vlredgsvet hfpehpcfkl vatseqmlss rysrvlltmv
      421 ktslyteela laarikhlef renhlkwlen gnlhssvfsp adaesgdskp
//
LOCUS       XP_040942576             311 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import receptor subunit TOM40-1 [Gossypium hirsutum].
ACCESSION   XP_040942576
VERSION     XP_040942576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086642.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="mitochondrial import receptor subunit TOM40-1"
                     /calculated_mol_wt=34475
     Region          31..311
                     /region_name="Porin3_Tom40"
                     /note="Translocase of outer mitochondrial membrane 40
                     (Tom40); cd07305"
                     /db_xref="CDD:132766"
     CDS             1..311
                     /gene="LOC107928790"
                     /coded_by="XM_041086642.1:991..1926"
                     /db_xref="GeneID:107928790"
ORIGIN      
        1 maglvppvtt tipadasktk kadekadymn lpfpipfeei hrealmslkp etfeglrfdf
       61 tkglnqkfsl shsvsmgpte ipsqsaetik iptshyefga nyidpnlmli grvltdgrln
      121 arvkwdltdn ltvkanaqlt nephmshgmf nfdykgkdyr sqfqigngal fgasyfqsvt
      181 phlsmggevf wagqhrksgi gyagryetdk mvatgqvast gmvalsyvqk vsekvslasd
      241 fmynymskdv tasvgydyil rqcrlrgkid sngcttafle erlnmglnfi lsaeidhkkk
      301 dykfgfgltv g
//
LOCUS       XP_016715777             157 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prefoldin subunit 5 [Gossypium hirsutum].
ACCESSION   XP_016715777
VERSION     XP_016715777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860288.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="probable prefoldin subunit 5"
                     /calculated_mol_wt=16877
     Region          25..148
                     /region_name="Prefoldin_5"
                     /note="Prefoldin subunit 5; cd23157"
                     /db_xref="CDD:467473"
     Region          25..64
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467473"
     Site            order(53,56..57,60..61,63..64,71..78,80..89,92..96,
                     100..105,114)
                     /site_type="other"
                     /note="prefoldin oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467473"
     Region          108..148
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467473"
     CDS             1..157
                     /gene="LOC107928971"
                     /coded_by="XM_016860288.2:220..693"
                     /db_xref="GeneID:107928971"
ORIGIN      
        1 massrgggsq qvirtgdmek msldqlkavk eqadievnll qdslnniraa tgrlenasaa
       61 lhdlslrpqg kkmlvpltas lyvpgtldda dkvlvdigtg yfvektmaeg kdycerkinl
      121 lksnfdqlie vaskkktlad eaglilqakl kqsspss
//
LOCUS       XP_016715585             471 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ C76, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016715585
VERSION     XP_016715585.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860096.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715585.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..471
                     /product="chaperone protein dnaJ C76, chloroplastic"
                     /calculated_mol_wt=52314
     Region          56..116
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(84..86,93,96..97,100..101)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          149..203
                     /region_name="Fer4_13"
                     /note="4Fe-4S single cluster domain of Ferredoxin I;
                     pfam13370"
                     /db_xref="CDD:433153"
     CDS             1..471
                     /gene="LOC107928819"
                     /coded_by="XM_016860096.2:161..1576"
                     /db_xref="GeneID:107928819"
ORIGIN      
        1 mpaiflplyt pstsiinntl tskpnsknlp yhhhrrrqsl ackasadsps silnfdlydl
       61 lgiesssdqs qiktayralq krchpdiagp tghdmaiiln eaysvlsdpg srlaydkeqa
      121 kmaelkgytg kplysvwlgs eseqravfvd eikcvgclkc alfaektfai esvygrarvi
      181 gqwadpehki leaieacpvd cismversdl aaleflmskq prgnvrvgvg ntvgarvsni
      241 fvevkkfqtr yfdamdkgsn keskeadrrr earmsaihai ksisrwwywq spnsgtpsak
      301 selslthisr kssepninki rdaaaarkqv resskttrsr apssylydde ywipsrhalp
      361 asvennsssr vapkppktnp rnetdnlhyg kdrrtrnsie wgiptvaamv aavivrlqvg
      421 drvageiteh vggslaltmv nsswsqvila gitwyliast ivelietirn r
//
LOCUS       XP_016715604             377 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715604
VERSION     XP_016715604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860115.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41041
     Region          <49..81
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     CDS             1..377
                     /gene="LOC107928840"
                     /coded_by="XM_016860115.2:288..1421"
                     /db_xref="GeneID:107928840"
ORIGIN      
        1 merercnsia ngdysysang iyseicndys ilekerdqss pdpslrgngy iehpvsrfdt
       61 magvaikygv evadikkmng lvtdfqmfal ksiqiplpgr hppspcssng ceaigqnnvn
      121 qttaqhlppd lldsfqslkt thrrvspams slqgfyalks terntvpegf emavyrkget
      181 hfpddspflk pssasypslk lhrncknkan affdengevg tnvmsvveaa kesedksnek
      241 lfkrrpksea dctpekllen ntstggfsti tskglalrtk aasrtnllid aevgfnpasi
      301 gigdgfvvdk fsavrksyst snlqdqdgst slsspmtapk wsrkpdlqpl staaittsff
      361 dglsmpmsar knkaald
//
LOCUS       XP_016715736             287 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin ligase BIG BROTHER-related [Gossypium hirsutum].
ACCESSION   XP_016715736
VERSION     XP_016715736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..287
                     /product="E3 ubiquitin ligase BIG BROTHER-related"
                     /calculated_mol_wt=31250
     Region          236..286
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(241,244,259,261,264,267,278,281)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..287
                     /gene="LOC107928938"
                     /coded_by="XM_016860247.2:236..1099"
                     /db_xref="GeneID:107928938"
ORIGIN      
        1 msaeqkeqvp npnvndndnl nseskqeerq sstrtpftnl sqvdadlala rtlqeqeray
       61 mmlsmnndgs dygsweggsy lndddfndlh dhddtddddd egeydgtdag dvdafdfhdh
      121 sedgeddnda sveldpadfs sdeayaralq daeerevaar llalagindg gtvtledhgh
      181 ggnsqdtwee vdpdelsyee llalaevvgt esrglsadsi aslpslifka gnsqtgtnds
      241 cvicrvdyed gdsltalsck hsyhpecinn wlkinkvcpv csaevst
//
LOCUS       XP_016715596             142 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin-like protein YLS8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715596
VERSION     XP_016715596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="thioredoxin-like protein YLS8 isoform X1"
                     /calculated_mol_wt=16473
     Region          1..142
                     /region_name="PLN00410"
                     /note="U5 snRNP protein, DIM1 family; Provisional"
                     /db_xref="CDD:215109"
     Site            order(21,23..24,86..88)
                     /site_type="active"
                     /note="first critical site [active]"
                     /db_xref="CDD:239252"
     Site            40..43
                     /site_type="active"
                     /note="second critical site [active]"
                     /db_xref="CDD:239252"
     CDS             1..142
                     /gene="LOC107928829"
                     /coded_by="XM_016860107.2:193..621"
                     /db_xref="GeneID:107928829"
ORIGIN      
        1 msyllphlhs gwavdqaila eeervviirf ghdwdetcmq mdevlssvae kiknfaviyv
       61 vditevpefn tmyelydpst vmfffrnkhi midlgtgnnn kinwalkdkq efidivetvy
      121 rgarkgrglv iapkdystky ry
//
LOCUS       XP_040942577             139 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin-like protein YLS8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942577
VERSION     XP_040942577.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086643.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="thioredoxin-like protein YLS8 isoform X2"
                     /calculated_mol_wt=15807
     Region          <36..139
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Site            37..40
                     /site_type="active"
                     /note="second critical site [active]"
                     /db_xref="CDD:239252"
     CDS             1..139
                     /gene="LOC107928829"
                     /coded_by="XM_041086643.1:163..582"
                     /db_xref="GeneID:107928829"
ORIGIN      
        1 migtklacrd rkgtsrkgks cfiksvmhge cngcslqmde vlssvaekik nfaviyvvdi
       61 tevpefntmy elydpstvmf ffrnkhimid lgtgnnnkin walkdkqefi divetvyrga
      121 rkgrglviap kdystkyry
//
LOCUS       XP_016715737             639 aa            linear   PLN 06-AUG-2024
DEFINITION  nucleolin 1 [Gossypium hirsutum].
ACCESSION   XP_016715737
VERSION     XP_016715737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..639
                     /product="nucleolin 1"
                     /calculated_mol_wt=66736
     Region          379..455
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          479..557
                     /region_name="RRM2_NUCLs"
                     /note="RNA recognition motif 2 (RRM2) found in
                     nucleolin-like proteins mainly from plants; cd12451"
                     /db_xref="CDD:409885"
     CDS             1..639
                     /gene="LOC107928939"
                     /coded_by="XM_016860248.2:260..2179"
                     /db_xref="GeneID:107928939"
ORIGIN      
        1 mgksskkstp kveaapavap pksgkkgkrd aeetpekqva akkqkkndgv aqaivkkeve
       61 aktqkkkeet ssssddsses edepapvkkq aavvkngsvp akkakqasss dssdssseeg
      121 sssdeeapak ntkpavakka avpaaktvka dsssdsssdd dsdeddepaa kkevaaakng
      181 aapvkkgeis dssdedsssd eddekskpap kkeptavtkk essdssesds ssdedvkppp
      241 knipsatakp ktessdssse eesdeedvkk apavrkasap ppkkvedsss dssddsesed
      301 eetpkkeakv akkassseee eseesdddee sdeeeapkkk dtdvemvdat tpakqdlksa
      361 kkvpqtpvtp qtqstgsktl fvgnlsfqie dadvrnffkg agevvevrfs sdaegnfkgy
      421 ghvefataea aqkalelnge ylmnravrld larergaytp ysgngnnsfq kggkgqsrti
      481 fvkgldasld edtirnslqe hfgscgeisr vaiptdrdsg avkgfayldf kdegslnkal
      541 eldgstlnnq slsvdeakpk gdfgsgrggg rsggwsggrd gsgrggrggr ggrdgggrgg
      601 rrggggrfgg grggrgtpyn kpnlaaagtg rkttfnded
//
LOCUS       XP_040942578             356 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamine synthetase nodule isozyme isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942578
VERSION     XP_040942578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086644.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..356
                     /product="glutamine synthetase nodule isozyme isoform X1"
                     /calculated_mol_wt=39290
     Region          14..354
                     /region_name="PLN02284"
                     /note="glutamine synthetase"
                     /db_xref="CDD:177922"
     CDS             1..356
                     /gene="LOC107928854"
                     /coded_by="XM_041086644.1:117..1187"
                     /db_xref="GeneID:107928854"
ORIGIN      
        1 msllndlvnl nlcdvtekvi aeyiwiggsg mdmrskartl pgpesdpsrl pkwnydgsst
       61 eqatgdnsev iicpqaifrd pfrrgrnmlv mcdayaptgd piptnkrfna dkifshpdvv
      121 aeepwygieq eytlfqkdtk wplgwpvggf papqgpyycg vgsdkafgrd ivdahykacl
      181 faginisgin gevmpgqwef qvgpvtgiss gdqvwmaryi leriteiaga vlsfdpkpvl
      241 gdwngagaht nystksmrnd gginvineai eklskrhkeh iaaygkgner rltglhetad
      301 intfswgvan rgasvrvgrd tekegkgyfe drrpssnmdp yvvtsmiaet tilwkp
//
LOCUS       XP_040942579             286 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamine synthetase nodule isozyme isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942579
VERSION     XP_040942579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086645.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..286
                     /product="glutamine synthetase nodule isozyme isoform X2"
                     /calculated_mol_wt=31636
     Region          <4..284
                     /region_name="PLN02284"
                     /note="glutamine synthetase"
                     /db_xref="CDD:177922"
     CDS             1..286
                     /gene="LOC107928854"
                     /coded_by="XM_041086645.1:102..962"
                     /db_xref="GeneID:107928854"
ORIGIN      
        1 mispqaifrd pfrrgrnmlv mcdayaptgd piptnkrfna dkifshpdvv aeepwygieq
       61 eytlfqkdtk wplgwpvggf papqgpyycg vgsdkafgrd ivdahykacl faginisgin
      121 gevmpgqwef qvgpvtgiss gdqvwmaryi leriteiaga vlsfdpkpvl gdwngagaht
      181 nystksmrnd gginvineai eklskrhkeh iaaygkgner rltglhetad intfswgvan
      241 rgasvrvgrd tekegkgyfe drrpssnmdp yvvtsmiaet tilwkp
//
LOCUS       XP_016715646            1390 aa            linear   PLN 06-AUG-2024
DEFINITION  MAP3K epsilon protein kinase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715646
VERSION     XP_016715646.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860157.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715646.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1390
                     /product="MAP3K epsilon protein kinase 1 isoform X1"
                     /calculated_mol_wt=153079
     Region          19..274
                     /region_name="STKc_Cdc7_like"
                     /note="Catalytic domain of Cell division control protein
                     7-like Serine/Threonine Kinases; cd06627"
                     /db_xref="CDD:270797"
     Site            order(26..30,34,47,49,80,96..99,102..103,106,144,146..149,
                     151,161..162,165,179..182,184,211,220)
                     /site_type="active"
                     /db_xref="CDD:270797"
     Site            order(26..30,34,47,49,80,96..99,101..103,106,148..149,151,
                     161..163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270797"
     Site            order(29..30,144,146..148,165,179..182,184,211,220)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270797"
     Site            order(161..173,178..184)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270797"
     CDS             1..1390
                     /gene="LOC107928881"
                     /coded_by="XM_016860157.2:268..4440"
                     /db_xref="GeneID:107928881"
ORIGIN      
        1 msrlaansaf pksktldnky mlgdeigkga ygrvykgldl engdfvaikq vsleniaqed
       61 lniimqeidl lknlnhkniv kylgssktka hlhiileyve ngslaniikp nkfgpfpesl
      121 vavyiaqvle glvylheqgv ihrdikgani lttkeglvkl adfgvatklt eadvnthsvv
      181 gtpywmapev iemsgvcaas diwsvgctvi elltcvppyy dlqpmpalfr ivqdehppip
      241 dslspditdf lrqcfkkdar qrpdaktlls hpwirncrra lqsslrqsgt irniaedaaa
      301 daessnadnq sagenlpvek vdasetssrk evssteatdr skydhdhsad ntpveertnn
      361 ldddllsdqv ptlaihekps lqsssgrlsv ksvavalgss qlhdishqde atmngdvgsp
      421 srrkhtekgq ggngdqidne nksfafgpit qnaglqkaak asvtssgnel irfsdppgda
      481 slddlfhpld knreergaea stsasasnvn hdtvpdtgkn dlakklrdti akkqmeeemg
      541 qsngggnllr lmmgvlkddv ididgldfed klpaenlfpl qavefgrlvg slrpeeseda
      601 ivtacqklia ifhqrpeqki vfvsqrgllp lmelldvpkt rvicsvlqli nhiikentdf
      661 qenaclvgfi pliksfagpd rpreirmeaa yflqqlcqss sltlqmflac hgipvlvgfl
      721 eadyakyrqm vhlaidgmwq vfklqrstpr ndfcriaakn gilprlintl yslneatrla
      781 tisggggshs gpvdsshhlf aqnetpfsvt dqsdvlkarh gmtehsfpag aqepsrasis
      841 lsqrsdpnlp dsrylavdvd rprssngald vsisressas kepenldrae dlrrqkisna
      901 lnrtsldrpp kliegisngl ttsvttqaeq vrpllsllek epprqqleyv rhlpglerhe
      961 silpllhand rktngeldfl maefaevsgr greiggvdst pkishkskkv gqlavnegta
     1021 stsgiasqta sgvlsgsgvl sarpgsttss gllsnmvstm sadvakeyle kvadlllefa
     1081 qadttvksym csqsllnrlf qmfnrieppi llkilkcinh lstdpnclen lqradaikyl
     1141 ipnlelnygp lvsqihhevl nalfnlckin krrqeqaaen giiphlmnfi msdsplkqha
     1201 lpllcdmaha srnsreqlra hggldvylsl lddelwsvia ldslavclah dndnrkveqa
     1261 llkkeaiqkl vtffqccpeq hfvhilepfl kiitkssrin ttlavngltp llisrldhqd
     1321 aiarlnllkl ikavyehhpr pkqlivendl pqklknliee rrdgqrsggq vlvkqmatsl
     1381 lkalhintvl
//
LOCUS       XP_016715647            1198 aa            linear   PLN 06-AUG-2024
DEFINITION  MAP3K epsilon protein kinase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016715647
VERSION     XP_016715647.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860158.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715647.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1198
                     /product="MAP3K epsilon protein kinase 1 isoform X2"
                     /calculated_mol_wt=131905
     Region          <1..82
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1198
                     /gene="LOC107928881"
                     /coded_by="XM_016860158.2:129..3725"
                     /db_xref="GeneID:107928881"
ORIGIN      
        1 msgvcaasdi wsvgctviel ltcvppyydl qpmpalfriv qdehppipds lspditdflr
       61 qcfkkdarqr pdaktllshp wirncrralq sslrqsgtir niaedaaada essnadnqsa
      121 genlpvekvd asetssrkev ssteatdrsk ydhdhsadnt pveertnnld ddllsdqvpt
      181 laihekpslq sssgrlsvks vavalgssql hdishqdeat mngdvgspsr rkhtekgqgg
      241 ngdqidnenk sfafgpitqn aglqkaakas vtssgnelir fsdppgdasl ddlfhpldkn
      301 reergaeast sasasnvnhd tvpdtgkndl akklrdtiak kqmeeemgqs ngggnllrlm
      361 mgvlkddvid idgldfedkl paenlfplqa vefgrlvgsl rpeesedaiv tacqkliaif
      421 hqrpeqkivf vsqrgllplm elldvpktrv icsvlqlinh iikentdfqe naclvgfipl
      481 iksfagpdrp reirmeaayf lqqlcqsssl tlqmflachg ipvlvgflea dyakyrqmvh
      541 laidgmwqvf klqrstprnd fcriaakngi lprlintlys lneatrlati sggggshsgp
      601 vdsshhlfaq netpfsvtdq sdvlkarhgm tehsfpagaq epsrasisls qrsdpnlpds
      661 rylavdvdrp rssngaldvs isressaske penldraedl rrqkisnaln rtsldrppkl
      721 iegisngltt svttqaeqvr pllsllekep prqqleyvrh lpglerhesi lpllhandrk
      781 tngeldflma efaevsgrgr eiggvdstpk ishkskkvgq lavnegtast sgiasqtasg
      841 vlsgsgvlsa rpgsttssgl lsnmvstmsa dvakeylekv adlllefaqa dttvksymcs
      901 qsllnrlfqm fnrieppill kilkcinhls tdpnclenlq radaikylip nlelnygplv
      961 sqihhevlna lfnlckinkr rqeqaaengi iphlmnfims dsplkqhalp llcdmahasr
     1021 nsreqlrahg gldvylslld delwsviald slavclahdn dnrkveqall kkeaiqklvt
     1081 ffqccpeqhf vhilepflki itkssrintt lavngltpll isrldhqdai arlnllklik
     1141 avyehhprpk qlivendlpq klknlieerr dgqrsggqvl vkqmatsllk alhintvl
//
LOCUS       XP_016715648             405 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic initiation factor 4A-3 [Gossypium hirsutum].
ACCESSION   XP_016715648
VERSION     XP_016715648.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860159.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715648.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="eukaryotic initiation factor 4A-3"
                     /calculated_mol_wt=45773
     Region          29..405
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(34,50,52..56,59,77..84,181..182)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350803"
     Site            order(57,61,77,80,216..218,221)
                     /site_type="other"
                     /note="Mago interface [polypeptide binding]"
                     /db_xref="CDD:350803"
     Site            order(100,144..145,148..149,168,171..173,195..196,
                     199..204,224..228)
                     /site_type="other"
                     /note="Barentsz interface [polypeptide binding]"
                     /db_xref="CDD:350803"
     Site            order(108..110,136..137,157..160,163,166,191,194)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350803"
     CDS             1..405
                     /gene="LOC107928882"
                     /coded_by="XM_016860159.2:130..1347"
                     /db_xref="GeneID:107928882"
ORIGIN      
        1 maaattsraa rrmgaedekl vfettegiep ilsfdqmglk ddllrgiyny gfekpsaiqq
       61 ravmpiingr dviaqaqsgt gktsmialtv cqvvdtasre vqalilsptr elasqtekvi
      121 rtigdfmniq ahaciggksv gedirkleng vhvvsgtpgr vcdmikrrtl rtraikllil
      181 desdemlsrg fkdqiydvyr hlppelqvcl isatlpheil emtskfmtdp irilvkrdel
      241 tlegikqffv avereewkfd tlcdlydtlt itqavifcnt krkvdwltek mrsnnftvss
      301 mhgdmpqker eaimaefrdg atrvlittdv wargldvqqv slvinydlpn nrelyihrig
      361 rsgrfgrkgv ainfvksddi kilrdieqyy stqidempmn vadli
//
LOCUS       XP_016715770             483 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715770
VERSION     XP_016715770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860281.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="histone-lysine N-methyltransferase ATXR2 isoform
                     X1"
                     /calculated_mol_wt=54226
     Region          <392..478
                     /region_name="SET_SMYD"
                     /note="SET domain (including SET domain and post-SET
                     domain) found in SET and MYND domain-containing protein,
                     and similar proteins; cd20071"
                     /db_xref="CDD:380997"
     Site            order(392,401,411,451..452,454)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380997"
     Site            order(417,473,475,478)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380997"
     CDS             1..483
                     /gene="LOC107928967"
                     /coded_by="XM_016860281.2:96..1547"
                     /db_xref="GeneID:107928967"
ORIGIN      
        1 melicpidqr cshqiaallr ppsppivqey fdqliskrkc qgikvkqngd lgkgvfaetd
       61 feeeqlifkd emlvgvqhps nkidclvcsy cfkfigsiek qigrklylkt igignssrng
      121 cqsnssddee dnhyvqnhhs sengassssg stiplpmmav eslmngelal pysnkfplps
      181 vvsclggcee afycskscae adwesslcll ctgeksescs rkallkfiqh anetndifll
      241 aakaisftil ryrklkashm seqekpassi lgtdlsllle awkpisighk rrwwdcialp
      301 ddidasdeat frreiqelaf tslqllkeai fdkecellfs leiyghiigm felnnldlvv
      361 aspvedyfly iddlpypekk eaekitqpyl dalgkdysnc cqgtaffplq scmnhsccpn
      421 akafkreedr dgqatiialr picngeevti syidedlsfe erqalladyg frcrcprcld
      481 eer
//
LOCUS       XP_016715771             474 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016715771
VERSION     XP_016715771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860282.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..474
                     /product="histone-lysine N-methyltransferase ATXR2 isoform
                     X2"
                     /calculated_mol_wt=53227
     Region          <390..469
                     /region_name="SET_SMYD"
                     /note="SET domain (including SET domain and post-SET
                     domain) found in SET and MYND domain-containing protein,
                     and similar proteins; cd20071"
                     /db_xref="CDD:380997"
     Site            order(408,464,466,469)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380997"
     CDS             1..474
                     /gene="LOC107928967"
                     /coded_by="XM_016860282.2:96..1520"
                     /db_xref="GeneID:107928967"
ORIGIN      
        1 melicpidqr cshqiaallr ppsppivqey fdqliskrkc qgikvkqngd lgkgvfaetd
       61 feeeqlifkd emlvgvqhps nkidclvcsy cfkfigsiek qigrklylkt igignssrng
      121 cqsnssddee dnhyvqnhhs sengassssg stiplpmmav eslmngelal pysnkfplps
      181 vvsclggcee afycskscae adwesslcll ctgeksescs rkallkfiqh anetndifll
      241 aakaisftil ryrklkashm seqekpassi lgtdlsllle awkpisighk rrwwdcialp
      301 ddidasdeat frreiqelaf tslqllkeai fdkecellfs leiyghiigm felnnldlvv
      361 aspvedyfly iddlpypekk eaekitqpyl dalgtaffpl qscmnhsccp nakafkreed
      421 rdgqatiial rpicngeevt isyidedlsf eerqallady gfrcrcprcl deer
//
LOCUS       XP_016715605             368 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine-rich receptor-like protein kinase 6 [Gossypium hirsutum].
ACCESSION   XP_016715605
VERSION     XP_016715605.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860116.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715605.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..368
                     /product="cysteine-rich receptor-like protein kinase 6"
                     /calculated_mol_wt=40878
     Region          50..312
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(50..54,58,70,72,101,117..120,124,126,169,171,
                     173..174,176,187,190,208..211)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(50..54,58,70,72,101,117..120,124,169,171,173..174,
                     176,187)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(54,124,126,169,171,173,190,208..211)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(186..193,204..211)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..368
                     /gene="LOC107928841"
                     /coded_by="XM_016860116.2:42..1148"
                     /db_xref="GeneID:107928841"
ORIGIN      
        1 mltkkeiqnl yssifiletq adcekimesl lmgldtlkta tanfsdenkl gqggfgpvyk
       61 gklfdgreia vkrlssnsgq glaelktevm lvakllhrnl vkllgfclee eekllvyeyl
      121 pngsldkilf dhgkrlrlgw gsrykiivgi argllylhed sqlriihrdl kasnilldee
      181 mnpkisdfgl aklfgesetq gntnriagty gymapeyakh glfsiksdvy sfgvlvleiv
      241 tgqknssfrn ltnllshawl hwnngtaeel idpilndpwp tfeafkcvhi gllcvqenaa
      301 drpsmsdiit mlsshsvtap apsrpaffvs nghfktdsan efgsglsrst dsiqrsvnev
      361 tiseldpr
//
LOCUS       XP_040942581             284 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine-rich repeat secretory protein 38, partial [Gossypium
            hirsutum].
ACCESSION   XP_040942581
VERSION     XP_040942581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086647.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..>284
                     /product="cysteine-rich repeat secretory protein 38"
     Region          33..126
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          138..237
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     CDS             1..284
                     /gene="LOC121213695"
                     /coded_by="XM_041086647.1:1852..>2703"
                     /db_xref="GeneID:121213695"
ORIGIN      
        1 mqflisftln flifssllss tyanfadeqr ynictnaany tngslysrni natlfsltna
       61 sltgfattti gldpdtvfgl vqcrpdvaen dcracintas deitqfcpnk kqamigygnc
      121 slrysdfrff statndlivy yrntmnvnds nlfdkqlvsl fqnlsvsaaa ndtkfavgai
      181 gyslfsdiyg mvqcsrdlpe ngclsclqai igfipqccdk kqgariftms cslrfelyaf
      241 fqtssppisg mlspppplpv stdepssvpt sssdgkfyyc ilss
//
LOCUS       XP_016715740             473 aa            linear   PLN 06-AUG-2024
DEFINITION  SPX and EXS domain-containing protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016715740
VERSION     XP_016715740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860251.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..473
                     /product="SPX and EXS domain-containing protein 1 isoform
                     X1"
                     /calculated_mol_wt=54872
     Region          105..441
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..473
                     /gene="LOC107928940"
                     /coded_by="XM_016860251.2:313..1734"
                     /db_xref="GeneID:107928940"
ORIGIN      
        1 mfggqvaapi nsphlrrsgs ravvsdlgae lgngvensyv hpleingskn asiplvtaai
       61 vpsptllwrf kvllfllwgf icgktgwqsv mrmsadlrdl flyeaflyyn plllvttmaw
      121 lwginlwvfs rsninyakif dldqnhlthr eiwkcatwmt iivptsmtay lylysngevs
      181 laasqpvlly favvmllifp fdifyfssry yllralwriv lplqaitfsd ffladiltsm
      241 akvfsdiers vcrmvhrqva tiawfeadsv cgshsvaipl vlvlpylfrf fqclrqyrdi
      301 gersallnal kystavpvif lsalkyhvlp eswtnfyrpl wllssvlnsl ysfywdvard
      361 wdfssfarmf kfnkshlysh llhgrtwvyf wvigsnlilr ctwtyklsah lrnnyltvft
      421 iaaleifrrf qwiffrvene wnkinfrpnm qlsmndpsdd evkllsssag ynv
//
LOCUS       XP_016715742             472 aa            linear   PLN 06-AUG-2024
DEFINITION  SPX and EXS domain-containing protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016715742
VERSION     XP_016715742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860253.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..472
                     /product="SPX and EXS domain-containing protein 1 isoform
                     X2"
                     /calculated_mol_wt=54785
     Region          105..440
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..472
                     /gene="LOC107928940"
                     /coded_by="XM_016860253.2:548..1966"
                     /db_xref="GeneID:107928940"
ORIGIN      
        1 mfggqvaapi nsphlrrsgs ravvsdlgae lgngvensyv hpleingskn asiplvtaai
       61 vpsptllwrf kvllfllwgf icgktgwqsv mrmsadlrdl flyeaflyyn plllvttmaw
      121 lwginlwvfs rsninyakif dldqnhlthr eiwkcatwmt iivptsmtay lylysngevs
      181 laasqpvlly favvmllifp fdifyfssry yllralwriv lplqaitfsd ffladiltsm
      241 akvfsdiers vcrmvhrqva tiawfeadsv cgshsvaipl vlvlpylfrf fqclrqyrdi
      301 gersallnal kystavpvif lsalkyhvlp eswtnfyrpl wllssvlnsl ysfywdvard
      361 wdfsfarmfk fnkshlyshl lhgrtwvyfw vigsnlilrc twtyklsahl rnnyltvfti
      421 aaleifrrfq wiffrvenew nkinfrpnmq lsmndpsdde vkllsssagy nv
//
LOCUS       XP_016715743             383 aa            linear   PLN 06-AUG-2024
DEFINITION  SPX and EXS domain-containing protein 1 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016715743
VERSION     XP_016715743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860254.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..383
                     /product="SPX and EXS domain-containing protein 1 isoform
                     X3"
                     /calculated_mol_wt=45274
     Region          15..351
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..383
                     /gene="LOC107928940"
                     /coded_by="XM_016860254.2:830..1981"
                     /db_xref="GeneID:107928940"
ORIGIN      
        1 mrmsadlrdl flyeaflyyn plllvttmaw lwginlwvfs rsninyakif dldqnhlthr
       61 eiwkcatwmt iivptsmtay lylysngevs laasqpvlly favvmllifp fdifyfssry
      121 yllralwriv lplqaitfsd ffladiltsm akvfsdiers vcrmvhrqva tiawfeadsv
      181 cgshsvaipl vlvlpylfrf fqclrqyrdi gersallnal kystavpvif lsalkyhvlp
      241 eswtnfyrpl wllssvlnsl ysfywdvard wdfssfarmf kfnkshlysh llhgrtwvyf
      301 wvigsnlilr ctwtyklsah lrnnyltvft iaaleifrrf qwiffrvene wnkinfrpnm
      361 qlsmndpsdd evkllsssag ynv
//
LOCUS       XP_016715543             231 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor ILR3 [Gossypium hirsutum].
ACCESSION   XP_016715543
VERSION     XP_016715543.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715543.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..231
                     /product="transcription factor ILR3"
                     /calculated_mol_wt=25471
     Region          75..150
                     /region_name="bHLH_AtILR3_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein IAA-leucine resistant 3
                     (ILR3) and similar proteins; cd11446"
                     /db_xref="CDD:381452"
     Site            order(75..76,79..80,82..83,87,106..107)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381452"
     Site            order(85..86,89,92..93,96,107..108,111..112,115,118,
                     121..122,125,128..129,131..132,135,138..139,142,145..146)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381452"
     CDS             1..231
                     /gene="LOC107928789"
                     /coded_by="XM_016860054.2:28..723"
                     /db_xref="GeneID:107928789"
ORIGIN      
        1 meldpsensn wlldygipdf pppaaafawp cqstlnapsn vsatvdcsfa dsdclkdvvs
       61 rkrlksescg gsgskacrek lrrdrlndrf lelgavlepe rpmkadkvai lsdavrmvrq
      121 lrseaqrlkd sneelqakik elkeeknelr dekqrlkadk eqleqqvkam saqpgfltqp
      181 psisaalaaq rqaagnklmp vigfpslamw qfmppaavdt sqdhvlrppv a
//
LOCUS       XP_040942583             755 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040942583
VERSION     XP_040942583.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086649.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..755
                     /product="pentatricopeptide repeat-containing protein
                     At5g13270, chloroplastic"
                     /calculated_mol_wt=84173
     Region          54..79
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          61..753
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          85..145
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          147..175
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          182..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          248..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          283..346
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          351..378
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          423..447
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          452..479
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          485..515
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          521..547
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..613
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..755
                     /gene="LOC121213696"
                     /coded_by="XM_041086649.1:12..2279"
                     /db_xref="GeneID:121213696"
ORIGIN      
        1 maspslppsv psqtaaaaaa aarfaripss vslkstsssf kippgqqqqg qlenlhlvsl
       61 skqgklkear dflkqmdeag vlvnphsyes lleacgkmas lsdgrlihrr lgnpsrylen
      121 cvlkmycace sfrdaeklfd emlekdvasw gilisgysqk grlkeafrlc trmielgigl
      181 nstvftnllk slsdvsvlei geqlhslvir tglstnvsvi taisnmyvkc rqlqraklvf
      241 dqmvetnava wtglmmgytr agkqkdalal firmlkegve mdqfvfsitl kacsgleyln
      301 lgrqihgyiv klglesdvsv gtpvvdlyik clcfdsarra fkrisepnda swsaiitgyc
      361 qigefekslq ifrslrlkdm amnsfiytsi iqacsalady nmgaqahada ikrglvsyvh
      421 gesamitfys kcgrldyanq afesidepdt vawtaiicgh ayhgnaseal kffrrmqsst
      481 arpnevtfig vltacshsgl vteaklyles msceygvdpt idhydcmvda yaragllqea
      541 yelvknmpfe adamswkcll ggcwihrnle lgeiaaenll qldpddtagy ilmfnlyglh
      601 gkwdeaarvr svmgarklkk elscswitvk gkvhrfvvgd khhprtddiy rklkelncsv
      661 tdvesihlte edvsfglper kqllmehser laiafglisv pnnvpivifk nlrackhchd
      721 fakhvsmvtg hritirdscr fhhfhlgkcs cddyw
//
LOCUS       XP_016715579             242 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715579
VERSION     XP_016715579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860090.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..242
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26508
     CDS             1..242
                     /gene="LOC107928813"
                     /coded_by="XM_016860090.2:283..1011"
                     /db_xref="GeneID:107928813"
ORIGIN      
        1 mknlsrnkfl lcfrpvvdmd lmrlepkpaa avvnrpaftc vagvqskedf skpstanssv
       61 sneeksiavh sggkktlskv ikavvfetvl ahrirdrkrk nesknrvltg kliqstisss
      121 ssssssssss sspltpittq kpetkhqqsg cneskpkqer igkgfscskn gamslflicl
      181 amtiiwgklv aiiltsiwly flhhsgvdvk metikrrgek epeekvving sknrervlnf
      241 gg
//
LOCUS       XP_040942584             175 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB30 [Gossypium hirsutum].
ACCESSION   XP_040942584
VERSION     XP_040942584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086650.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..175
                     /product="transcription factor MYB30"
                     /calculated_mol_wt=19664
     Region          1..>67
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..175
                     /gene="LOC121213697"
                     /coded_by="XM_041086650.1:1066..1593"
                     /db_xref="GeneID:121213697"
ORIGIN      
        1 mnylrpnlkr gnftkeedet iitlheslgn rwsaiaamlp grtdneiknh whtnlkkhak
       61 hkpsttklhd kytnnqnlnd dhlqinpiip plilessppp plstntqssf tttdnsvest
      121 kadsvsdfws epflldilsd dlptmgasag fefdlldgei lspfgfydhl epfsf
//
LOCUS       XP_040942585             497 aa            linear   PLN 06-AUG-2024
DEFINITION  tryptophan decarboxylase TDC2 [Gossypium hirsutum].
ACCESSION   XP_040942585
VERSION     XP_040942585.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086651.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="tryptophan decarboxylase TDC2"
                     /calculated_mol_wt=54891
     Region          16..496
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(162..163,166,253,282,285,311,314)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99743"
     Site            314
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
     CDS             1..497
                     /gene="LOC107928801"
                     /coded_by="XM_041086651.1:119..1612"
                     /db_xref="GeneID:107928801"
ORIGIN      
        1 mgriesnlan tphfnplnpr efrkqahemv dfiadyyqni esypvlsqvq pgylraslpq
       61 kapslpesle tiledvknqi ipgmthwlsp nffaffpstv stagflgeml ctcfnsvgfn
      121 wiaspaatel emvvidwlad mlklpksfmf qgtgggviqn ttseailvtl iaardkaldv
      181 ygsgnlnklv vyasdqthst fakackmvgi sprnirlipt tidagfslsp vqlkaavead
      241 madglvplyl cvtlgttstt avdpiellag vakehgmwvh vdaayagsac icpefrhhln
      301 gvervdslsl sphkwllsgl dccclwvknp talvkalstn peylrnkqse sdsvvdfkdw
      361 qvgtgrrfks lrlwlifrty gvvnlqghir sdvgmakife efvrsdprfe ivvprefglv
      421 cfrlnpdetf gsdytellnr klldwvnstg rvymthtkvg giyvlrfavg atltadnhvv
      481 aawklikega dallktv
//
LOCUS       XP_040942587             987 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar sorting protein 18 [Gossypium hirsutum].
ACCESSION   XP_040942587
VERSION     XP_040942587.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086653.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..987
                     /product="vacuolar sorting protein 18"
                     /calculated_mol_wt=111529
     Region          248..403
                     /region_name="Pep3_Vps18"
                     /note="Pep3/Vps18/deep orange family; pfam05131"
                     /db_xref="CDD:461557"
     Region          612..745
                     /region_name="Clathrin"
                     /note="Region in Clathrin and VPS; pfam00637"
                     /db_xref="CDD:459884"
     Region          834..951
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(836,839,870,872,875,878,943,946)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..987
                     /gene="LOC121213698"
                     /coded_by="XM_041086653.1:231..3194"
                     /db_xref="GeneID:121213698"
ORIGIN      
        1 mdqgrevftv dlleryatkg rgvitcmaag ndvivigtsk gwiirhdfgv gdsndidlsa
       61 grpgeqsihr vfvdpggshc iatvvgsgga dtfythakwt kprvlsrlkg lvvnavawnr
      121 qqiteastre vilgtengql yeiavdekdk rekhikplfe laelpeaimg lqmetaivsn
      181 gsryyvmavt ptrlysftgi gtletvfasy lnravhfmel pgeipnsdlh ffikqrraih
      241 fawlsgagiy hgslnfgaqh sspngdqnfv enkalldyak lsngaevvkp ssmavsefhf
      301 lllignkvkv vnriseqiie elqfdqvsds ssrgiiglcs dataglfyay dqnsifqvsv
      361 ndegrdmwrv yldmkeyaaa lansrdplqr dqvylvqaea afssrdflra asfyakinyi
      421 lsfeeitlkf isvneqdalr tfllrkldnl skddkcqitm istwatelyl dkinrllled
      481 dtalvnrnse yqsiikefra flsdckdvld evttmrlles ygrveelvyf aslkeqheiv
      541 ihyyiqqgea kkalevlrkp avpidlqykf apdlitlday etvefwmasn nlnprklipa
      601 mmryssepha knetheviky lefcvhhlhn edpgihnlll slyakqedds sllrflqckf
      661 gkgqengpdf fydpkyalrl clkekrmrac vhiysmmsmh eeavalalqi dpelamaead
      721 kveddedlrk klwlmvakhv ieqekgtkre nirkaiaflk etdgllkied ilpffpdfal
      781 iddfkeaics slddynkqie qlkqemndat hgadnirndi salaqryvvi drdedcgvck
      841 rkilaiggdy rmasgytavg smapfyvfpc ghafhshcli ahvtrctnes qaeyildlqk
      901 qltllgsevr resnggltne vitsispadk lrsqlddava secpfccelm iceislpfim
      961 peeaqqvasw eikpqnlgnq rsfslpv
//
LOCUS       XP_040942588             444 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14B [Gossypium hirsutum].
ACCESSION   XP_040942588
VERSION     XP_040942588.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086654.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..444
                     /product="beta-glucuronosyltransferase GlcAT14B"
                     /calculated_mol_wt=50744
     Region          25..443
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..444
                     /gene="LOC121213699"
                     /coded_by="XM_041086654.1:433..1767"
                     /db_xref="GeneID:121213699"
ORIGIN      
        1 mkklykklvf mrnplsrhsn rvfndskwii pflasllvsi tlifsaifgf fkapydryhh
       61 qlpfdiisfa ktevsngyfv esslnkvlnt nsssfepprl aylisgtkgd shrmmrtlqv
      121 iyhprnqyvl hldleappre rlelanavkn nppfavvenv rvmaqsnlvt ykgptmiast
      181 lqaiaillke sldwdwfinl sasdyplvtq ddllhvfsnl srhlnfiehm qitgwklnqr
      241 arpivvdpgl ylskksdiaw ttqrrslpts fklftgsawv altrtfaeyc iwgwdnfprt
      301 iliyytnfis spegyfhtvi cntnefhsta ishdlhyiaw dtppkqhpis lsmkdfdkmv
      361 ksnapfarkf hkndpvldki dkellgrtgr fapgawcigs seggadpcsv rgddsvfrpg
      421 pgaerlqrlv ntllseefrk kqcs
//
LOCUS       XP_040942589              68 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942589
VERSION     XP_040942589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086655.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..68
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7514
     CDS             1..68
                     /gene="LOC121213700"
                     /coded_by="XM_041086655.1:115..321"
                     /db_xref="GeneID:121213700"
ORIGIN      
        1 mvffcflvdq tkkvsttkpa agicsrcggg arvadmktst rfcyvpfykk swraiictfc
       61 gailrsyr
//
LOCUS       XP_040942590             279 aa            linear   PLN 06-AUG-2024
DEFINITION  secretory carrier-associated membrane protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942590
VERSION     XP_040942590.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086656.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="secretory carrier-associated membrane protein 1"
                     /calculated_mol_wt=31605
     Region          49..>89
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          88..260
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..279
                     /gene="LOC121213701"
                     /coded_by="XM_041086656.1:116..955"
                     /db_xref="GeneID:121213701"
ORIGIN      
        1 mnrfdsspfd edevnpfsnq gtassrlspl ppepydrgat idipldsvks lkekekelqa
       61 reaelrrreq elkrkedaia rsgiiiedkn wppfypiihh niakeipihl qnvqyvafst
      121 llglvacltw niiavtaawi kcegpaiwll aiiyllsgvp gayylwyrpl yramrtdsal
      181 kfgwffifyi lhiffcifat iappflfkgk siagilpaid lfgvdaavgi fyfigcafff
      241 vesllslwvi qqvymyfrgs gkaaeikrea vtksmmaal
//
LOCUS       XP_040942591             598 aa            linear   PLN 06-AUG-2024
DEFINITION  indole-3-acetic acid-amido synthetase GH3.10 [Gossypium hirsutum].
ACCESSION   XP_040942591
VERSION     XP_040942591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086657.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..598
                     /product="indole-3-acetic acid-amido synthetase GH3.10"
                     /calculated_mol_wt=68111
     Region          22..578
                     /region_name="GH3"
                     /note="GH3 auxin-responsive promoter; pfam03321"
                     /db_xref="CDD:460885"
     CDS             1..598
                     /gene="LOC121213702"
                     /coded_by="XM_041086657.1:77..1873"
                     /db_xref="GeneID:121213702"
ORIGIN      
        1 meaeasngng ngcsndhdii rwfdtistnv atvqretlrq ilelnrdvey lkkwfgdkdl
       61 diremdacem eslytslvpl vshedlepli qriadgdtsp iltqhpittl slssgttegr
      121 qkfipftrhn settlqiyrl aaayrstvyp trsngrilef iysskrfktr gglmagtatt
      181 hifaseefri kqekiklftc sphevisngd ykqttychll lglffrkeie citstfaysm
      241 vqafssfeeq wedickdike gnvsskitlp kmrkavldii epnpslasri eaickglqgs
      301 dwfglvpklw pnakyvysim tgsmqhylkk lrhycgslpl vsaeygates wigvnldpsl
      361 epekvtfavm ptfsyfefip lyrqdqysgs gsvdfieddp vplsqvkvgq eyeivlttft
      421 glyryrlgdv vevsgfhnet pklkficrrk lllvinidkn tekdlqlvve kgsqllskhr
      481 aelvdftsha klthqsghyv iyweikgkve ervlceccre mdasfvdpgy vvsrrtnsig
      541 plelciverg afnkildyfi gngatlsqfk iprctnnetl lkildlytik rfrsivyg
//
LOCUS       XP_016715576             173 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem II repair protein PSB27-H1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016715576
VERSION     XP_016715576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..173
                     /product="photosystem II repair protein PSB27-H1,
                     chloroplastic"
                     /calculated_mol_wt=18804
     Region          8..173
                     /region_name="PLN00064"
                     /note="photosystem II protein Psb27; Provisional"
                     /db_xref="CDD:215045"
     CDS             1..173
                     /gene="LOC107928811"
                     /coded_by="XM_016860087.2:1..522"
                     /db_xref="GeneID:107928811"
ORIGIN      
        1 maspslltpt pklqpllpts aapppsplph qnhhhpsrrh flslsavtta tlslssllpv
       61 tpppafaadd eeyvketsdv inkvrntinm dkndpnvata vaelrdtsns wvakyrreka
      121 llgrpsfrei ysalnavsgh yisfgptapi pakrkarile emdtaekall rgr
//
LOCUS       XP_040942592             314 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942592
VERSION     XP_040942592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086658.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35690
     Region          10..308
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..314
                     /gene="LOC121213703"
                     /coded_by="XM_041086658.1:944..1888"
                     /db_xref="GeneID:121213703"
ORIGIN      
        1 mildsvakqs nldcflqctt ptvrsqllpk sefgslnrlw hpwerenvey ftlndlwdcy
       61 dewsaygagv pivlndnetl vqyyvpylsa iqiftsnlre eiesgdgdcf sdswstdese
      121 sdklwrwdgc cssedggsdq dsvchlnnrl gylyfqyfet stpygrvplm dkinglsrry
      181 pglmslrsid lspaswmavs wypiyhipmg rtikdlstcf ltyhtlsssf qeidpeddik
      241 laeknqkeke gnislppfgl atykmqgdvw lsssgcgggd qerllsllgv adswlkqlsv
      301 qhhdfnyfsg irhg
//
LOCUS       XP_016715628             233 aa            linear   PLN 06-AUG-2024
DEFINITION  ELMO domain-containing protein A [Gossypium hirsutum].
ACCESSION   XP_016715628
VERSION     XP_016715628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="ELMO domain-containing protein A"
                     /calculated_mol_wt=26905
     Region          37..203
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..233
                     /gene="LOC107928867"
                     /coded_by="XM_016860139.2:317..1018"
                     /db_xref="GeneID:107928867"
ORIGIN      
        1 magsrswigg vlnrlsnkrs dkfldypltp iqeqrlqklq kriqipfdet rpdhqealke
       61 lwhiafpnva lkglvseqwk emgwqgpnpy tdfracgfis lenllfygrt ypasfrrvll
      121 kqdgtratwe ypfavagini sfmliqmldl ysekpsnlpg fnfvkllged eeafdvlyct
      181 afemvdaqwl amrasymefn kvlqatssql erelcsdnvc riqdlsaysl lyq
//
LOCUS       XP_016715623             141 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715623
VERSION     XP_016715623.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860134.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715623.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..141
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15307
     Region          91..140
                     /region_name="EPF"
                     /note="Epidermal patterning factor proteins; pfam17181"
                     /db_xref="CDD:407307"
     CDS             1..141
                     /gene="LOC107928861"
                     /coded_by="XM_016860134.2:36..461"
                     /db_xref="GeneID:107928861"
ORIGIN      
        1 mkeamkipav tiaaiaiilf cyipvmasar hvkapphgdh nkhyeehdsr pstrqgsmlg
       61 akmvsnelvd snwetgslpk rkradtlkis gsslpdcsha cmsctpcllv ivsfvcssle
      121 eaetcpmayk cmcnhksypv p
//
LOCUS       XP_040942593             422 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF054 [Gossypium
            hirsutum].
ACCESSION   XP_040942593
VERSION     XP_040942593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086659.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="ethylene-responsive transcription factor ERF054"
                     /calculated_mol_wt=46895
     Region          213..275
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(214..215,217,219,221,223,227,229,236,238,241)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..422
                     /gene="LOC121213704"
                     /coded_by="XM_041086659.1:290..1558"
                     /db_xref="GeneID:121213704"
ORIGIN      
        1 maaaensgef nkgvgdvqdw evdkgneldf gfekrqwkpv fgeasmsqrp nkkitqrqep
       61 vrsiasmadq ssslpsssps ltlslpssss ssnaslpssr mvfpfafdgt qnpvyfphpm
      121 fqplpqsqqq misfspqqqq qqqhgfvyrp ffagesspvp ppqlpqpsqq qllqywsdtl
      181 sprrrmmmms rlgqdgrqly rpplqpintt klyrgvrqrh wgkwvaeirl prnrtrlwlg
      241 tfdtaedaal aydreafklr genarlnfpe lflnkdkdts pgpsstvppq depkepnsqs
      301 temeamppps qgdnnpdsds glgsseatas devqmaaegs gsgsgsqelv wgdmseawfn
      361 viqegwgpgs pvwddldtsn nlllpsnlpf pnqnhhqfgd tsspsssssc pmksffwkdh
      421 ds
//
LOCUS       XP_040942594             254 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RMA1H1 [Gossypium hirsutum].
ACCESSION   XP_040942594
VERSION     XP_040942594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086660.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="E3 ubiquitin-protein ligase RMA1H1"
                     /calculated_mol_wt=28294
     Region          44..254
                     /region_name="PLN03208"
                     /note="E3 ubiquitin-protein ligase RMA2; Provisional"
                     /db_xref="CDD:178747"
     CDS             1..254
                     /gene="LOC107928842"
                     /coded_by="XM_041086660.1:151..915"
                     /db_xref="GeneID:107928842"
ORIGIN      
        1 maneryieea evrsyllesk nsmekwvnsp etvtgsddnp sagfdcnicl dtvqdpvvtl
       61 cghlycwpci ykwlhcqsis teshdqkqpq cpvckaevsa stivplygrg qmsmasrgka
      121 pqlgivipkr pvgpdfgtpr spnsatspqf thqihhhhhg ysyqpqvsdy psspmlspgg
      181 tmmnvpdpvt rifgemvyar vfgesitnly aypnsynltg stprirrhlk qadkalnris
      241 fflfccliic llsf
//
LOCUS       XP_016715537             466 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ubiquitin-conjugating enzyme E2 38 [Gossypium hirsutum].
ACCESSION   XP_016715537
VERSION     XP_016715537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..466
                     /product="putative ubiquitin-conjugating enzyme E2 38"
                     /calculated_mol_wt=52700
     Region          214..410
                     /region_name="UBCc_UBE2O"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 O and related
                     proteins; cd23837"
                     /db_xref="CDD:467439"
     CDS             1..466
                     /gene="LOC107928783"
                     /coded_by="XM_016860048.2:106..1506"
                     /db_xref="GeneID:107928783"
ORIGIN      
        1 mdikeienpt mvsvgsekts mdskgkniic ydkkwedqle dasgsdhgdt vslagsedny
       61 efdlsynydd gdyddytddv sddcdnhefl yeddywimqs hfdnvdlspg veaslnllkd
      121 ssliedmqqq lkavaasfnl lgikneaild vndglksast stvmvpresg feqkkgneeh
      181 imqnfrsfkh fdvvdvfssh rycnltssgq typkeyakri qeewkilesg lpetiyvrvc
      241 eanmgllrav imgpsgtpyh dglfffdcff ppkypneppm vyfysgglrl npnlyscgkv
      301 clsllgtwhg eetemwvpgq stmlqvlvsi qalilnakpf fnepgfemsy vgaegekrsr
      361 kynedafals lktmiytlrr ppqhfedfva ghfrtrardi imaceaykeg aaigsvlvkd
      421 cvpdpikten ssserfkrtm tkmidamvkv fvengstyeq flnsst
//
LOCUS       XP_016715586             167 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715586
VERSION     XP_016715586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860097.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18158
     CDS             1..167
                     /gene="LOC107928820"
                     /coded_by="XM_016860097.2:116..619"
                     /db_xref="GeneID:107928820"
ORIGIN      
        1 mdqqqheeqp ptspasssss ytlflkimsk rktwvflfvl vyailldssw nflksilswy
       61 hqnqaqyqsp gwpalyasvl lggvfglism aaavavavpa tmvtwitvvv llaffgkpkr
      121 tlvaegkkit reiagsvlkt lltegnvvav vcavlgyyvl vsnnnge
//
LOCUS       XP_016715625             304 aa            linear   PLN 06-AUG-2024
DEFINITION  non-structural maintenance of chromosomes element 4 homolog A
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715625
VERSION     XP_016715625.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860136.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715625.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..304
                     /product="non-structural maintenance of chromosomes
                     element 4 homolog A isoform X1"
                     /calculated_mol_wt=34789
     Region          213..300
                     /region_name="Nse4_C"
                     /note="Nse4 C-terminal; pfam08743"
                     /db_xref="CDD:462585"
     CDS             1..304
                     /gene="LOC107928863"
                     /coded_by="XM_016860136.2:191..1105"
                     /db_xref="GeneID:107928863"
ORIGIN      
        1 mtesekttll avkheiesds eandpnyqha tdrrtlrtry lavknlifde rddlssidsa
       61 kfksivndle slhqfvlkpr eqiadaeall yitntlltsv katngdgiti sdfvdslvrd
      121 fakqssrpdg rtlidwkkig iefsdasrss rgcrtmigpm dtqmkqrkar rkrarlvene
      181 qpaevddtdi kkktntdinm atmfdilrkh rivrleqlvl nrnsfaqtve nifalsflvk
      241 dgradiklde kgihlvspkn aptataiask evvynhfvfr fdfkdwklmk dyievghelm
      301 phrd
//
LOCUS       XP_040942595             235 aa            linear   PLN 06-AUG-2024
DEFINITION  non-structural maintenance of chromosomes element 4 homolog B
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942595
VERSION     XP_040942595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086661.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="non-structural maintenance of chromosomes
                     element 4 homolog B isoform X2"
                     /calculated_mol_wt=26938
     CDS             1..235
                     /gene="LOC107928863"
                     /coded_by="XM_041086661.1:195..902"
                     /db_xref="GeneID:107928863"
ORIGIN      
        1 mtesekttll avkheiesds eandpnyqha tdrrtlrtry lavknlifde rddlssidsa
       61 kfksivndle slhqfvlkpr eqiadaeall yitntlltsv katngdgiti sdfvdslvrd
      121 fakqssrpdg rtlidwkkig iefsdasrss rgcrtmigpm dtqmkqrkar rkrarlvene
      181 qpaevddtdi kkktntdinm atmfdilrkh rivrleqllm kdyievghel mphrd
//
LOCUS       XP_016715674             889 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At1g12290 [Gossypium hirsutum].
ACCESSION   XP_016715674
VERSION     XP_016715674.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715674.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..889
                     /product="probable disease resistance protein At1g12290"
                     /calculated_mol_wt=101456
     Region          159..403
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          512..>815
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          516..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          562..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          586..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          659..710
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          711..740
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          741..763
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          811..834
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..889
                     /gene="LOC107928899"
                     /coded_by="XM_016860185.2:783..3452"
                     /db_xref="GeneID:107928899"
ORIGIN      
        1 mgnlfsisls ldtiitrcwd savgkasfpc kleenlhalk neveelkair tylmsrvrva
       61 edeqqlrrlp qvdlwlqran rvttdadqli vkspqhvekl cmggccsrhp rsthkfgkqi
      121 arilqevkdm kekghfsdva ykppipsadk rpsdptvgle syvnqvwsyi qkdlvrisgi
      181 yglggvgktt llnqinnkfh dtthgylviw avasqdrpie kvqdeiakii glsnerwksk
      241 sldekagdir silynrrfal llddiwewfd ltraglplpt qengskvift trrldvccqm
      301 qpnmdnnirv eclppgeafk lfeekvgset lrmhpdickl aeavveecag lplalitigr
      361 amaskktrre weyatevlrq saasvlpgvg kemypklkfs ydsltservk ycflycslyp
      421 edyliekdel vdcwigegll dehtnlsnar nqghfiigsl idaclleked nhfvkmhdvi
      481 rdtalwiage sengrffvks gaqlkeqpka kkweevtrms lmvnqienlt eilecpnlqt
      541 lflgtndlkv iindffnfmp mlrvldlsrn enleelpvgi aklvslehln lsftkirklp
      601 velkaleklk ylnlectvdl emipqqliss isklqvlkme gcgygcllvl eeiehlnyln
      661 vltlsfrsas elekasrfnk ffscaiehvg lldfrdsrsl nimalaklqh lctlslwscm
      721 dleevkiern iiegagcfhs lryvaltgcn hlrdvswvtf aphleelwiy gcngleeiis
      781 eeklgevael kgnlnlfskl dyllldglpk lktiyhhalp fpqlkkvhit gcpmlkklpl
      841 nsnsakgqrl iiegqerwwk gvewedeftr iaflptfkpl iseemldtn
//
LOCUS       XP_016715610             880 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein SUMM2 [Gossypium hirsutum].
ACCESSION   XP_016715610
VERSION     XP_016715610.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860121.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715610.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..880
                     /product="disease resistance protein SUMM2"
                     /calculated_mol_wt=100092
     Region          188..400
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <499..>659
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          515..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          537..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          561..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          585..607
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          633..654
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..880
                     /gene="LOC107928847"
                     /coded_by="XM_016860121.2:199..2841"
                     /db_xref="GeneID:107928847"
ORIGIN      
        1 mgnifsisls ldtiitrcwd caarqasyic nlednlhalk neveelkaim rdltsrvraa
       61 eheqqlkrlp qvdlwlqrad cvvtdadqli vqspqhvekl rmggccsrhp rsthklgkqi
      121 arilqevkhl kengdfsdva ckppipsatk rpseptvgle snfnqvwncl qkeqvgiigi
      181 yglggvgktt llnqinnkfh dmshdyhviw avasqdrpik kvqdqiaeri gllaeglksi
      241 eekaedifnv lckkkfalll ddiwewfdlt ragvplptqe ngskiifttr rldvccqmqp
      301 nmdnnirvec lppgeafklf eekvgsetlr mhpdicklae avvaecaglp lalitigram
      361 askktprewe yatevlrqst asvlpgvgke mypklkfsyd clpderfrsc flycslyped
      421 ylieedelvd cwigegllde htnlsnarnq ghfiigslid acllgkgpin vdvkmhdvir
      481 dmalwiages ekekffaksg vqlkeqpkak kweevtrmsl menqienlte ilecpnlqtl
      541 flgrndlkvi mddffnfmpm lrvldlshnk kleefpvgia klvslehlnl swtgikklpv
      601 elktlaklky lnlewtvdle ripqqlissf sklqvlkmeg cgfgclvlee mehlqylnvl
      661 tltftcasel ekasrfnkff scaiehvsll gfrdsrslni malaklqnlc tlrllscmdl
      721 eevkierniv egagcfhslr yvtvdkcnhl kdvswvtfap hleqlyilec qgleeiisee
      781 klgevaelkg nsnlfskler lalyhlhkls tiychplpfp qllevcimec pmlkklplns
      841 nsakgqrlii egeegwwkdv gwedestkia flptfkplil
//
LOCUS       XP_016715677             228 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At1g12290 [Gossypium hirsutum].
ACCESSION   XP_016715677
VERSION     XP_016715677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860188.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="probable disease resistance protein At1g12290"
                     /calculated_mol_wt=26447
     CDS             1..228
                     /gene="LOC107928901"
                     /coded_by="XM_016860188.2:24..710"
                     /db_xref="GeneID:107928901"
ORIGIN      
        1 mehlkylnvl tltfrsasel ekasrfnkff scaiehvsll dfrdsrslni lalanlqnly
       61 sikctncmdl kevkiesniv egaryfhsfr fvgltyckqm rdvswvifap hlekllirgc
      121 nsleeiisee kldevteska ntnlfsrlee ldlcrlpkmk tiyyhalpfp qlkkisivkc
      181 pmlkklllns nsakgqrlii kgekgwwkdv ewedestrta flpsfkpq
//
LOCUS       XP_040942597             375 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g63020 [Gossypium hirsutum].
ACCESSION   XP_040942597
VERSION     XP_040942597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086663.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..375
                     /product="probable disease resistance protein At5g63020"
                     /calculated_mol_wt=41799
     Region          159..356
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..375
                     /gene="LOC107928900"
                     /coded_by="XM_041086663.1:237..1364"
                     /db_xref="GeneID:107928900"
ORIGIN      
        1 mgnifsisls ldtiitrcwd caarqaiyic nlednlhalq aevaklkelr gdltsrvria
       61 edeqqhkrln qvegwlqrad hvvadadqls respqqvekl cmggccsrhp rsthkfgkqi
      121 atilqevkhl kengdfsdva rkpplpsatk rpseptvgle syvnqvwssl qkeqvgvigi
      181 yglggvgktt llnqinnifh dtthdyrviw avasqdrpie kvqdeiakri glsnegwesr
      241 srdekagdif nvlcrkkfal llddiwerfd ltgagvplpt qgngskvift trsrdvccqm
      301 qpnmannikv eclppgkalk lfeekvgset lqlhpdirkl akavveecag lplalinnwa
      361 shgiqedpsr mgicy
//
LOCUS       XP_040942598             375 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g63020 [Gossypium hirsutum].
ACCESSION   XP_040942598
VERSION     XP_040942598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086664.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..375
                     /product="probable disease resistance protein At5g63020"
                     /calculated_mol_wt=41799
     Region          159..356
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..375
                     /gene="LOC107928900"
                     /coded_by="XM_041086664.1:237..1364"
                     /db_xref="GeneID:107928900"
ORIGIN      
        1 mgnifsisls ldtiitrcwd caarqaiyic nlednlhalq aevaklkelr gdltsrvria
       61 edeqqhkrln qvegwlqrad hvvadadqls respqqvekl cmggccsrhp rsthkfgkqi
      121 atilqevkhl kengdfsdva rkpplpsatk rpseptvgle syvnqvwssl qkeqvgvigi
      181 yglggvgktt llnqinnifh dtthdyrviw avasqdrpie kvqdeiakri glsnegwesr
      241 srdekagdif nvlcrkkfal llddiwerfd ltgagvplpt qgngskvift trsrdvccqm
      301 qpnmannikv eclppgkalk lfeekvgset lqlhpdirkl akavveecag lplalinnwa
      361 shgiqedpsr mgicy
//
LOCUS       XP_016715676             375 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g63020 [Gossypium hirsutum].
ACCESSION   XP_016715676
VERSION     XP_016715676.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860187.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715676.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..375
                     /product="probable disease resistance protein At5g63020"
                     /calculated_mol_wt=41799
     Region          159..356
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..375
                     /gene="LOC107928900"
                     /coded_by="XM_016860187.2:237..1364"
                     /db_xref="GeneID:107928900"
ORIGIN      
        1 mgnifsisls ldtiitrcwd caarqaiyic nlednlhalq aevaklkelr gdltsrvria
       61 edeqqhkrln qvegwlqrad hvvadadqls respqqvekl cmggccsrhp rsthkfgkqi
      121 atilqevkhl kengdfsdva rkpplpsatk rpseptvgle syvnqvwssl qkeqvgvigi
      181 yglggvgktt llnqinnifh dtthdyrviw avasqdrpie kvqdeiakri glsnegwesr
      241 srdekagdif nvlcrkkfal llddiwerfd ltgagvplpt qgngskvift trsrdvccqm
      301 qpnmannikv eclppgkalk lfeekvgset lqlhpdirkl akavveecag lplalinnwa
      361 shgiqedpsr mgicy
//
LOCUS       XP_016720653             905 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g63020 [Gossypium hirsutum].
ACCESSION   XP_016720653
VERSION     XP_016720653.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720653.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..905
                     /product="probable disease resistance protein At5g63020"
                     /calculated_mol_wt=103500
     Region          182..425
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          535..>836
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          539..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          561..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          585..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          609..631
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          657..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          682..733
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          734..763
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          764..786
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..905
                     /gene="LOC107933026"
                     /coded_by="XM_016865164.2:242..2959"
                     /db_xref="GeneID:107933026"
ORIGIN      
        1 mqrfnhlqqt eivqltllks kpgmgnifsi slsldtiitr cwdsavgkas fpckleenlh
       61 alkneveele airtylmsrv rvaedeqqlr rlpqvdlwlq ranrvitdad qlivkspqhv
      121 eklcmggccs rhptsthkfg kqiarilqev kdmkekgdfs dvackppips ankrpseptv
      181 glesyvnqvw syiqnelvgi sgiyglggvg kttllnqinn rfhdsthgyl viwavasqdr
      241 piekvqdeia kriglsnerw ksksldekag dirsilygrr falllddiwe wfdltragip
      301 iptldneskv ifttrrldvc cqmqpnmdnn irvaclpsge afklfeekvg setlqmhpdi
      361 hklaeavvee caglplalit igramaskkt sreweyavev lrqsaasvlp gvgkemypkl
      421 kfsydcltse rvkscfsycs lypedyripk delvdcwige glldehtnls sarnqghfii
      481 gslidaclle kecnhhvkmh dvirdmslwi agesekekff vksgvqlkeq pkakkweevt
      541 rmslmdnqie nlteilecpn lqtlflrrnr lkvimddffn fmpmlrvldl srnmnleelp
      601 vgiaelvsle hlnlsrtgik klpvqlktla klkylnlewt rdlemiprql issfsklqvl
      661 kmercgygcl lvleemehlk ylnvltisfr naselekasr fnksfscaie avslvdfrds
      721 rsltimalan lqhlctltlw rctdlekvki erniilgagr fhslrsvild ecnhlrdvsw
      781 vafaphlevl riaecnglee iiseeklgev aelkgnsnlf skleilylhn laklrtiyhh
      841 alpfpllkki rivkcgmlkk lplnckstkg qrlviegeeg wwknvewkde striaflpsf
      901 kpyvi
//
LOCUS       XP_040942599             878 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein SUMM2 [Gossypium hirsutum].
ACCESSION   XP_040942599
VERSION     XP_040942599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086665.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..878
                     /product="disease resistance protein SUMM2"
                     /calculated_mol_wt=99887
     Region          186..400
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <498..>658
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          514..535
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          536..559
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          560..582
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          583..605
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..878
                     /gene="LOC107933100"
                     /coded_by="XM_041086665.1:296..2932"
                     /db_xref="GeneID:107933100"
ORIGIN      
        1 mgnifsisld piitrcwdca tgqasyicnl ednlhdlqae vagleelrsd lmsrvriaed
       61 eqqlqrlnqv egwlsraetl indadqlivq spphvenlcm ggccsthprs sikfgkqiak
      121 klkqvkdqke ngdfsdvask pplpsaterp septvglesn fdkvwsclqk eqvgiigiyg
      181 lggvgkttll nqinnkfhdt thdyrviwav asqdrpiekv qdqiakrigl snegwesksl
      241 dekaedifqv lckkkfalll ddiwerfdlt ragvplppke ngskvifttr rfdvccqmqp
      301 nmdnnirvec lppgeafrlf eekvgsetlr mhpdicklae avveecaglp lalitigram
      361 askktprewe yaievlrqsa asvlpgvgke mypklkfsyd claekpkscf lycslypedy
      421 pigkdelvdc wigeglldeh tnlsnvrnqg hfvigslida clleegknkv rvkmhdvird
      481 malwiagesd kekfcvksgv qlkelpeakk weevtrmslm wnqienltev lecpnlqtlf
      541 lgrnrlrvii ndffnfmpml rvldlsynml eelpvgiakl vslehlnlsw tgikklpvel
      601 kalaklkyln lewtehlemi pqqlissfse lqvqkmegcr ygcllvleem ehlkylnvlt
      661 ltfrsasele kasrfnkffs caiesvqlig frdsrslnim alaklqhlys lsllfclele
      721 evkierniie gagyfhslrh vylfgsrylr dvswvtfaph levlwifeci gleeiisegk
      781 lgevaelkgn snlfskleil mlenlpklkt iyhhalsfpq lkeitivkcg mlkklplnsn
      841 sakgqrlvie gdkgwwkdve wedestqiaf lpsfkpvl
//
LOCUS       XP_016720667             405 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA polymerase II subunit 5-mediating protein homolog isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016720667
VERSION     XP_016720667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865178.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="RNA polymerase II subunit 5-mediating protein
                     homolog isoform X1"
                     /calculated_mol_wt=45162
     Region          22..144
                     /region_name="Prefoldin_URI1"
                     /note="RNA polymerase II subunit 5-mediating protein
                     homolog; cd23159"
                     /db_xref="CDD:467475"
     Region          22..60
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467475"
     Site            order(49,52..53,56..57,59..60,66..73,75..84,87..91,
                     95..100,109)
                     /site_type="other"
                     /note="putative prefoldin oligomer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467475"
     Region          103..143
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467475"
     CDS             1..405
                     /gene="LOC107933032"
                     /coded_by="XM_016865178.2:81..1298"
                     /db_xref="GeneID:107933032"
ORIGIN      
        1 mgksqvkgtv tslssmfpae evqkaakmve dklsdkqnem nqlkefiann tslinlvqkl
       61 pdelhhdimv pfgkaaffpg rlihtneflv llgesyyter takqtveilk rrgksleskv
      121 ntlkavmqdl kaeasffdst aseaaeglve ireyeednst erasqsgsle letpsvaead
      181 nkmgasedde yarimsrlee lekeelaaed neenledede danavesdgn edelikaaeg
      241 dgdedewtka afhrkkdecy syldhgqrys esqsrkqlqq fngkepieem snkykhqdlt
      301 nqfastglte epvtkgnyeg eishgriiqq dtkslspsin asapfekksv qasksefdss
      361 kaftgsiveh tqnldkssvg tnmtslqssg sqpskpvsrf kmqrk
//
LOCUS       XP_016720668             401 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA polymerase II subunit 5-mediating protein homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016720668
VERSION     XP_016720668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865179.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="RNA polymerase II subunit 5-mediating protein
                     homolog isoform X2"
                     /calculated_mol_wt=44698
     Region          22..144
                     /region_name="Prefoldin_URI1"
                     /note="RNA polymerase II subunit 5-mediating protein
                     homolog; cd23159"
                     /db_xref="CDD:467475"
     Region          22..60
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467475"
     Site            order(49,52..53,56..57,59..60,66..73,75..84,87..91,
                     95..100,109)
                     /site_type="other"
                     /note="putative prefoldin oligomer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467475"
     Region          103..143
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467475"
     CDS             1..401
                     /gene="LOC107933032"
                     /coded_by="XM_016865179.2:81..1286"
                     /db_xref="GeneID:107933032"
ORIGIN      
        1 mgksqvkgtv tslssmfpae evqkaakmve dklsdkqnem nqlkefiann tslinlvqkl
       61 pdelhhdimv pfgkaaffpg rlihtneflv llgesyyter takqtveilk rrgksleskv
      121 ntlkavmqdl kaeasffdst aseaaeglve ireyeednst erasqsgsle letpsvaead
      181 nkmgasedde yarimsrlee lekeelaaed neenledede danavesdgn edelikaaeg
      241 dgdedewtka afhrkkdecy syldhgqrys esqsrkqlqq fngkepieem snkykhqdlt
      301 nqfastglte epvtkgeish griiqqdtks lspsinasap fekksvqask sefdsskaft
      361 gsivehtqnl dkssvgtnmt slqssgsqps kpvsrfkmqr k
//
LOCUS       XP_016720688             402 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat extensin-like protein 4 [Gossypium hirsutum].
ACCESSION   XP_016720688
VERSION     XP_016720688.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720688.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..402
                     /product="leucine-rich repeat extensin-like protein 4"
                     /calculated_mol_wt=43689
     Region          52..>311
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          119..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          190..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          214..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          238..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          262..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          286..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..402
                     /gene="LOC107933048"
                     /coded_by="XM_016865199.2:41..1249"
                     /db_xref="GeneID:107933048"
ORIGIN      
        1 mastwycsfi isqtlllsll hlssssaath hhhhhhrslp pnpklqqayt alqafkkviy
       61 sdpnnittnw vgpdvckytg vycaphphdk tikvvagidl ngydiagylp delglltdla
      121 lihlnsnrfc givpqtlsnl shlfeldlsn nrfvgpfptv vlslpslkyl dirynefegs
      181 lpaqlfaknl daifvnnnrf snvipnnfva ssasvvvfan nklggclpps ianfantlee
      241 lllintslsg clppevgyly klkvldvsnn nlvgpipysi aglahleiln lahnmmsgiv
      301 psgvcvlpnl knftfsynff ceeegicgnl ssngvafddr rnclpekprq rsekeceaal
      361 ehpvdcfdyh yggggggsia ippamvpvat pmlspfmapg ha
//
LOCUS       XP_016720670             765 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TPX2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016720670
VERSION     XP_016720670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865181.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..765
                     /product="protein TPX2 isoform X1"
                     /calculated_mol_wt=87019
     Region          330..497
                     /region_name="TPX2_importin"
                     /note="Cell cycle regulated microtubule associated
                     protein; pfam12214"
                     /db_xref="CDD:463495"
     Region          656..732
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..765
                     /gene="LOC107933035"
                     /coded_by="XM_016865181.2:208..2505"
                     /db_xref="GeneID:107933035"
ORIGIN      
        1 mevstetatv tvidelyefs apcffdftkg eseeeirdae lwfetalsya pspfmirika
       61 gnrtfqmesl cnfseedqmq kasgssdata pnsnledkpq aeqvpdkvke eakppeakve
      121 ikqivtkian dnkekenigt vgaqenesal ankshlnglg geekskstvq vdteactpkp
      181 lmnsqkklvs dkkhqtakki astirnssml kpkngnagtp nlaqenqavk rqkldggrsr
      241 qilnvkphnl phksklglts gssnlcssta qpsnkldrkv yvreqaalfv smaemmkkfq
      301 sstrdlsrph sssndnaatv qmpvlrltrp kepefetaqr mrpvavksta eleeemmaki
      361 pkfkarplnk kifeastlps lprstpktqe fqefhfetma rasknaetss vastevsrqn
      421 tqwkphltep ktpvlqtslr arpitvkssi eleqeeleka pkfkarplnk kifeskgelg
      481 ifcntkkqvt ipqefhfath erippppavf dlfdklslks esshdpiprn tipnpfhlqt
      541 eergakkekk fvmeiiekqf eeerarvpka npypyttdyp vlpskpepkq ctkpepfqle
      601 slvrheeemk remeerqrke keeaqmrifk aqpvlkedpi pvpekvrkpl tqvqafdlhv
      661 nhravdraef dqkikekemv ykrfreesea armieeekal kqlrrtmvph arplpkfdhp
      721 fcpqkssket tkpkpphlrv lqrierkkri ssfatptssp atlmr
//
LOCUS       XP_016720671             758 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TPX2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016720671
VERSION     XP_016720671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865182.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..758
                     /product="protein TPX2 isoform X2"
                     /calculated_mol_wt=86319
     Region          323..490
                     /region_name="TPX2_importin"
                     /note="Cell cycle regulated microtubule associated
                     protein; pfam12214"
                     /db_xref="CDD:463495"
     Region          649..725
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..758
                     /gene="LOC107933035"
                     /coded_by="XM_016865182.2:196..2472"
                     /db_xref="GeneID:107933035"
ORIGIN      
        1 mevstetatv tvidelyefs apcffdftkg eseeeirdae lwfetalsya pspfmirika
       61 gnrtfqmesl cnfseedqmq kasgssdata pnsnledkpq aeqvpdkvke eakppeakve
      121 ikqivtkian dnkekenigt vgaqenesal ankshlnglg geekskstvq vdteactpkp
      181 lmnsqkklvs dkkhqtakki astirnssml kpkngnagtp nlaqenqavk rqkldggrsr
      241 qilnvkphnl phksklglts gssnlcssta qpsnkldrkv yvreqaalfv smaemmkkfq
      301 sstrdlsrph sssnmpvlrl trpkepefet aqrmrpvavk staeleeemm akipkfkarp
      361 lnkkifeast lpslprstpk tqefqefhfe tmarasknae tssvastevs rqntqwkphl
      421 tepktpvlqt slrarpitvk ssieleqeel ekapkfkarp lnkkifeskg elgifcntkk
      481 qvtipqefhf atheripppp avfdlfdkls lksesshdpi prntipnpfh lqteergakk
      541 ekkfvmeiie kqfeeerarv pkanpypytt dypvlpskpe pkqctkpepf qleslvrhee
      601 emkremeerq rkekeeaqmr ifkaqpvlke dpipvpekvr kpltqvqafd lhvnhravdr
      661 aefdqkikek emvykrfree seaarmieee kalkqlrrtm vpharplpkf dhpfcpqkss
      721 kettkpkpph lrvlqrierk krissfatpt sspatlmr
//
LOCUS       XP_040942601             341 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942601
VERSION     XP_040942601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086667.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..341
                     /product="zinc finger CCCH domain-containing protein 2"
                     /calculated_mol_wt=38340
     Region          110..136
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     CDS             1..341
                     /gene="LOC107933033"
                     /coded_by="XM_041086667.1:94..1119"
                     /db_xref="GeneID:107933033"
ORIGIN      
        1 mttvydpshh ltskklcfkd leipprkkql hcchkaaame lphhearlhk ylpsnedddg
       61 tddpygtdhf rmyefkvrrc trsrshdwtd cpfahpgeka rrrdpiryqy ssticsdhrr
      121 gggcprgddc efahgvfecw lhptryrtea ckdgknckrk vcffahssre lrllpesppp
      181 lkyknldnny nhcclfcrsv tsssslspts tllglshfsr spslspplsp lghqqrtpry
      241 ggdrlskfgt emtssyddvl lkevmsclgt mnlseasspm attantnipw ldvsfkgaps
      301 mespsgsgey fngggddekn ngngvvldhd ldlgwvnell m
//
LOCUS       XP_040942602             888 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 2 homolog A [Gossypium
            hirsutum].
ACCESSION   XP_040942602
VERSION     XP_040942602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086668.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..888
                     /product="26S proteasome non-ATPase regulatory subunit 2
                     homolog A"
                     /calculated_mol_wt=97446
     Region          34..888
                     /region_name="RPN1"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5110"
                     /db_xref="CDD:227441"
     CDS             1..888
                     /gene="LOC107933092"
                     /coded_by="XM_041086668.1:176..2842"
                     /db_xref="GeneID:107933092"
ORIGIN      
        1 msdqkndagt sqanapandp kkkedqkkkd dedlseedla lkqqlelyve rvqdsdpglq
       61 kvalesmrhe irtstssmts vpkplkflrp hygtlkafye tmpesdlkky ladilsvlal
      121 tmsaegeres lkyrllgseg digswgheyv rnlageiaqe ygkrqseeaa iedlmelvqq
      181 ivsfhmkhna epeavdllme vedldllieh vdktnfkrtc lyltssaryl pgpddmlvld
      241 iaytiylkfe efasalqial sldnmqhvrq vfrscdnqlk kmqfcyilar hgitfelddd
      301 mvaddderet lqdiinntkl sesyltlard ievmepkspe diykahlldg rasagasvds
      361 arqnlaatfv nafvnagfgq dklmtapads siggssgnwl fknkehgkts aaaslgmill
      421 wdvdsglaqi dkyfhsndnh viagallgvg ivncgvkndc dpalallsdy iskedssvri
      481 gaimglgiay agaqneqirs sltlilndak apldviafta islgliyvgs cneevaqaii
      541 falmdrsese lgepltrllp lalgllylgk qerveataev sktfnekirk ycdmtllsca
      601 yagtgnvlkv qnllghcaqh lekgethqgp avlgiamvam aeelgldmsi rslehllqyg
      661 eqnirravpl algllcisnp kvnvmdtlsr lshdsdseva maavislgli gagtnnaria
      721 gmlrnlssyy ykdasllfcv riaqglvhlg kglltlnpyh sdrfllspta laglvtmlha
      781 cldmkamvlg kyhyvlyfiv lamqprmlmt vdenlkplsv pvrvgqavdv vgqagrpkti
      841 tgfqthstpv llaagdrael atekyiplsp ileghvilke npdyreds
//
LOCUS       XP_016720673             424 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription activator GLK1 [Gossypium hirsutum].
ACCESSION   XP_016720673
VERSION     XP_016720673.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865184.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720673.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="transcription activator GLK1"
                     /calculated_mol_wt=46530
     Region          <108..422
                     /region_name="PLN03162"
                     /note="golden-2 like transcription factor; Provisional"
                     /db_xref="CDD:178707"
     CDS             1..424
                     /gene="LOC107933038"
                     /coded_by="XM_016865184.2:273..1547"
                     /db_xref="GeneID:107933038"
ORIGIN      
        1 mlavsplrnn tskdddegem estftissde fpdfadgnll esidfddlfl sidvdgdvlp
       61 dleldpeila vlppageese mnasgektee sdnqrkdeee nkvstskgde etvskreepk
      121 avktgskdgd kgrkssikgk snnnnqgtrk vkvdwtpelh rrfvqaveql gvdkavpsri
      181 lelmgidclt rhniashlqk yrshrkhlla reaeaaswih rrqiygsatp vggggkrdvn
      241 hwlpptmgfp psaspmhhqn hlfrplhvwg hptmdqslmh lwpkhlappp ppprpawgpp
      301 ppadpsfwhh qhhrvpngqt pgtpcfpppl taaptrfgav pvpgipphha mykadtgigv
      361 pasqlrrhpl vdlhpskesi daaigdvlsk pwlplpiglk ppstdgvlve lqrqgvpkip
      421 psca
//
LOCUS       XP_016720674             424 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription activator GLK1 [Gossypium hirsutum].
ACCESSION   XP_016720674
VERSION     XP_016720674.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720674.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="transcription activator GLK1"
                     /calculated_mol_wt=46530
     Region          <108..422
                     /region_name="PLN03162"
                     /note="golden-2 like transcription factor; Provisional"
                     /db_xref="CDD:178707"
     CDS             1..424
                     /gene="LOC107933038"
                     /coded_by="XM_016865185.2:196..1470"
                     /db_xref="GeneID:107933038"
ORIGIN      
        1 mlavsplrnn tskdddegem estftissde fpdfadgnll esidfddlfl sidvdgdvlp
       61 dleldpeila vlppageese mnasgektee sdnqrkdeee nkvstskgde etvskreepk
      121 avktgskdgd kgrkssikgk snnnnqgtrk vkvdwtpelh rrfvqaveql gvdkavpsri
      181 lelmgidclt rhniashlqk yrshrkhlla reaeaaswih rrqiygsatp vggggkrdvn
      241 hwlpptmgfp psaspmhhqn hlfrplhvwg hptmdqslmh lwpkhlappp ppprpawgpp
      301 ppadpsfwhh qhhrvpngqt pgtpcfpppl taaptrfgav pvpgipphha mykadtgigv
      361 pasqlrrhpl vdlhpskesi daaigdvlsk pwlplpiglk ppstdgvlve lqrqgvpkip
      421 psca
//
LOCUS       XP_016720712              73 aa            linear   PLN 06-AUG-2024
DEFINITION  signaling peptide TAXIMIN 2 [Gossypium hirsutum].
ACCESSION   XP_016720712
VERSION     XP_016720712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..73
                     /product="signaling peptide TAXIMIN 2"
                     /calculated_mol_wt=7646
     CDS             1..73
                     /gene="LOC107933072"
                     /coded_by="XM_016865223.2:89..310"
                     /db_xref="GeneID:107933072"
ORIGIN      
        1 mgdcrplgfl lglpfalial vlsvvgaviw vlgtilsclc pcciccagla nfavsliklp
       61 ikvlrwfidq ipc
//
LOCUS       XP_040942604             670 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-coenzyme A oxidase 3, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040942604
VERSION     XP_040942604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086670.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..670
                     /product="acyl-coenzyme A oxidase 3, peroxisomal"
                     /calculated_mol_wt=75479
     Region          3..670
                     /region_name="PLN02312"
                     /note="acyl-CoA oxidase"
                     /db_xref="CDD:215178"
     CDS             1..670
                     /gene="LOC107933091"
                     /coded_by="XM_041086670.1:167..2179"
                     /db_xref="GeneID:107933091"
ORIGIN      
        1 meqafkrtqi ltnhllqssp ssqtlssnac lsysppelse nyafdikdmr klidrhnlee
       61 rdwlfglmkq sklfnpkvrg gkvfvspdyn qsmeqqremt lkrieyllek gafkgwltek
      121 gediemrkfa gfevcsiydh slftklgvhf flwggaiqff gtkhhhdkwl rdtenysikg
      181 cfamtelghg snvrgletvt tydsntgefv intpcesaqk ywiggaanha thtvvfsqlh
      241 ingtnqgvha fivqirdadg yicpnirivd cghkiglngv dngriwfdnv rvprenllns
      301 vadvspdgky lssienpdqr faafmapltv grvniaissv yqskvalats iryaltrraf
      361 slkknepevl lldypshqhr lfplvaktya msfaanylkm lyvkrtpqsn kiihivsssf
      421 katftwnnmq ilqecreacg gqglktenrv gqlkgeydvq stfegdnlil mqqvskalfa
      481 eymaaqkrnk vfkglglehm nkpcpviplq ltsttlrcsq fqmdalclre rdllnrfvad
      541 vskckakges neqaflmcye laqdlgkafs draifqtfvd aettlpagsl kdvlgtlrsl
      601 yaliciedvs flqygylsvd nganvrreit klctelrpha lalvssfgip daflgpiafn
      661 wieanawssv
//
LOCUS       XP_040942605             670 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-coenzyme A oxidase 3, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040942605
VERSION     XP_040942605.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086671.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..670
                     /product="acyl-coenzyme A oxidase 3, peroxisomal"
                     /calculated_mol_wt=75479
     Region          3..670
                     /region_name="PLN02312"
                     /note="acyl-CoA oxidase"
                     /db_xref="CDD:215178"
     CDS             1..670
                     /gene="LOC107933091"
                     /coded_by="XM_041086671.1:161..2173"
                     /db_xref="GeneID:107933091"
ORIGIN      
        1 meqafkrtqi ltnhllqssp ssqtlssnac lsysppelse nyafdikdmr klidrhnlee
       61 rdwlfglmkq sklfnpkvrg gkvfvspdyn qsmeqqremt lkrieyllek gafkgwltek
      121 gediemrkfa gfevcsiydh slftklgvhf flwggaiqff gtkhhhdkwl rdtenysikg
      181 cfamtelghg snvrgletvt tydsntgefv intpcesaqk ywiggaanha thtvvfsqlh
      241 ingtnqgvha fivqirdadg yicpnirivd cghkiglngv dngriwfdnv rvprenllns
      301 vadvspdgky lssienpdqr faafmapltv grvniaissv yqskvalats iryaltrraf
      361 slkknepevl lldypshqhr lfplvaktya msfaanylkm lyvkrtpqsn kiihivsssf
      421 katftwnnmq ilqecreacg gqglktenrv gqlkgeydvq stfegdnlil mqqvskalfa
      481 eymaaqkrnk vfkglglehm nkpcpviplq ltsttlrcsq fqmdalclre rdllnrfvad
      541 vskckakges neqaflmcye laqdlgkafs draifqtfvd aettlpagsl kdvlgtlrsl
      601 yaliciedvs flqygylsvd nganvrreit klctelrpha lalvssfgip daflgpiafn
      661 wieanawssv
//
LOCUS       XP_016720730             348 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ homolog subfamily B member 13 [Gossypium hirsutum].
ACCESSION   XP_016720730
VERSION     XP_016720730.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865241.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720730.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..348
                     /product="dnaJ homolog subfamily B member 13"
                     /calculated_mol_wt=38508
     Region          4..346
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..348
                     /gene="LOC107933090"
                     /coded_by="XM_016865241.2:170..1216"
                     /db_xref="GeneID:107933090"
ORIGIN      
        1 mgldyykilk vssnvndedl kkaykrlamk whpdknplnn edaeakfkqi veayevlsdp
       61 qkravydryg eeglkgvapp aesggasffs tgygipttfq fnqqnvadei fnelfgafgg
      121 glrgtrfsss lfgddifggg gggrggvrfs gsvygddifg stnpgalrka apmenwlhcs
      181 leelfkgtik kmkicreivh isgkimqvee iltinvrpgw kkgtkitfae kgnerpniip
      241 adlifiieek phnvftregn dlivaqkisl vdalygctvh lttldgrnlt ipihnvihpc
      301 yeevvpregm piqkdpskrg nlrikfdvkf ptrltpeqks gikkllgp
//
LOCUS       XP_016720675            1029 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 44 [Gossypium hirsutum].
ACCESSION   XP_016720675
VERSION     XP_016720675.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865186.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720675.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1029
                     /product="U-box domain-containing protein 44"
                     /calculated_mol_wt=114279
     Region          25..157
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          264..313
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(265,267..270,289,293,302)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          <821..>988
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     CDS             1..1029
                     /gene="LOC107933039"
                     /coded_by="XM_016865186.2:260..3349"
                     /db_xref="GeneID:107933039"
ORIGIN      
        1 mstmdfnigi edvgvailqe lwnrvtlqav elaketrdvv iekdsfrefs rsiteldvll
       61 kalnvrtiea amgtestkva leklndklrr arqiiknyka gsrlrfllhs hsvltemsgl
      121 akdiattiss fqlsnldmal nlksmndevi eklnsmefsv aaatekiale iensvsqssr
      181 nrenavnlle kiaeavgada naslvqtela flkqekeeme vqkkqaealq lsqlmqllhs
      241 teivpsprne eastyhkqyp igsficplck eimvdpvavf cghsfernai qeyfesgnkn
      301 cptckeelrs leltpnvnlr ssieewkknd mdlrfqaavs ginsddhirk nqalddmqvl
      361 veisqyavra aeeglipkfv eslkdttlnt maavkclycl atycddrkre iieagavrri
      421 vkriyngete pntiaillel skteafveki gntkdcipll vylvgnsnpe ialkaqdvlr
      481 nlssnthfvv kmaesgffqs fvarfnqavg hqetralmas aliemqlken sindlkdkqf
      541 vhnlvhmlaa napacksaci kcvkkliqyp kmvkrflsdp atiplmlnvi sfrsdpilkq
      601 eaaeilallv qackqpqfqi yqglqelqse hsvglflqlv ekserefkiq flhllielsn
      661 ksktaqnlir dnvdavthlf scldsnqplv rrwtmkliyc vsegdgvplp pspgketain
      721 nlasilicsp dfeersiaag iisqlpkddi dvdeilckte tlkaihevic ssdeefggig
      781 ahnnqdksll enalaallrf tgsskpelqn qvgklelypa lvrvlstgss lakqrtatal
      841 ehlsrstssl vseasirvrh edsrslfnti nlfpnmswcc sasaenkisc pvhgiacsqr
      901 htfclvkada vkpllqtlsd tnsgvaeasl kaletlledh stlshataai vesqgveail
      961 qvlekgtlsa ktialdlfhk ivnhsrisgp sfqrsegili qllhedairk kvalvlkqmk
     1021 vlpeqssyf
//
LOCUS       XP_040942606             558 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g21065 [Gossypium
            hirsutum].
ACCESSION   XP_040942606
VERSION     XP_040942606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086672.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..558
                     /product="pentatricopeptide repeat-containing protein
                     At4g21065"
                     /calculated_mol_wt=62469
     Region          <7..556
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          55..81
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          87..148
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          152..179
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          225..250
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          254..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          287..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..349
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..558
                     /gene="LOC107933050"
                     /coded_by="XM_041086672.1:96..1772"
                     /db_xref="GeneID:107933050"
ORIGIN      
        1 mnnvyklhvr liktglqndp vslrrlllsf aaaapaslph arsvfarvpf pdtfayntli
       61 rahahsspsh svslfsamrr dgvspdnftf pfvlkacarl highdahali iklglgsdiy
      121 vqnglislyg sfgsvagafd vfdemperdl vswssmiscf annnfgyeal glfqdmqlvg
      181 nlkpdevtml svisavsslg alelgkwvda yisrtglkrt vslgtalidm ysrcgsvdds
      241 ikifnaipvk nvltwtvlin glavhgrsee alkvfhemkn aglkpdhitf ngvlvacshg
      301 glvddgwrvf esiksdygme ptvehygciv dllgraglln kafefvdtmp ikpnaviwrt
      361 llgacvkhnd lklsekakvk iheldpnhdg dyvllsnvyg qvgkwdekan vrnsmrekkv
      421 gkkpgysfln egdmlhefvs gddfhpksne ikrflvsiid dlrldgytff tcnalhdved
      481 eekeqnlsfh seklavafal lrfkdrrtir viknlricyd chcfmkhvsn kfdreivvrd
      541 rnrfhhfskg scsckdyw
//
LOCUS       XP_016720723            1136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720723
VERSION     XP_016720723.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865234.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720723.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=125296
     CDS             1..1136
                     /gene="LOC107933084"
                     /coded_by="XM_016865234.2:141..3551"
                     /db_xref="GeneID:107933084"
ORIGIN      
        1 mmpqelqprs frpyisssis apsftsftna ssvhssddpd pnptnskfks sfpslsssss
       61 ssssrslkns rfspssfahn arlaialvpc aaflldlggt pvvatltlgl miayivdsln
      121 fksgaffgvw fsliaaqiaf ffsaslyysl ssiplsilaa flcaetnfli gawaslqfkw
      181 iqienptivl alerllfacv pfaassiftw atvsavgmnn asyylmafnc vfywvfaipr
      241 vssfktkqev kyhggevpdd nlilgplesc lhtlnllffp lvfhiashys vmfssaasis
      301 dllllffipf lfqlyastrg alwwvtknpl qlrsiqlvng aialivvvic leirvvfrsf
      361 gryiqvpppl nyllvtttml ggaagagfya lgmvsdafss laftslavvv saagaivvgf
      421 pilfiplpsv agfylarfft kksltsyfaf vvlgslmvmw fvmhnfwdln iwlagmslks
      481 fcklivadvv laiaipglal lpsklhflte vglichalll chienrffsy ssiyyygldd
      541 dvmypsymvi lttiigfalv rrlsvdhrig pkavwiltcl yssklsmlfl tsksvvwvsa
      601 illlaisppl llyrdksrta skmkawqgya hatvvalsvw fcretifeal qwwngrppsd
      661 glllgfcill tglacvpiva lhfshvmsak rcivlvvatg llfilmqppi plswtyrsei
      721 iraarqsadd isiygfmask ptwpswllil ailltlaaat svipikyive lrafyaiamg
      781 ialgvyisae fflqaavlha livvtmvcas ffvvfthfps asstkllpwv fallvalfpv
      841 tyllegqvri ksflaenefg dtreedrklt tllavegart sllglyaaif mlialeikye
      901 laslireksf dkgairhnqs gqsnsvgfpp rmrfmqqrra ssvssftikr maaegawmpa
      961 vgnvatvmcf aiclilnvnl tggsnqaiff lapillllnq dsdfvagfgd kqryfpvtvt
     1021 isiylvlasv ysiwedvwhg nagwgidigg pgwffavknl alliltfpsh ilfnrfvwty
     1081 skttdstpll tlplnlppiv isdlvkirvl gllgiiysva qyiisrqqyi sgmkyi
//
LOCUS       XP_016720762             225 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator-associated protein 2 [Gossypium hirsutum].
ACCESSION   XP_016720762
VERSION     XP_016720762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="mediator-associated protein 2"
                     /calculated_mol_wt=24717
     CDS             1..225
                     /gene="LOC107933122"
                     /coded_by="XM_016865273.2:229..906"
                     /db_xref="GeneID:107933122"
ORIGIN      
        1 mdseqniyrp ppefeenssq qlvdftvsgs telfliqwpi hqhpeindqv vtlqlgpdgk
       61 lgcftdstgk tydfvspasq gpdatvilss eseskivgki srrvslvhym spdeyeklss
      121 dkkllhqrss gtlmtdssnp fsspmqskgr kgshsmgrtv sthgsqhkst vsgineqskp
      181 skrkhdhest gsmnqpthsh etnpisgsse hshkskskkk vknde
//
LOCUS       XP_016720662             192 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720662
VERSION     XP_016720662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865173.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..192
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=21018
     Region          67..>160
                     /region_name="DUF2301"
                     /note="Uncharacterized integral membrane protein
                     (DUF2301); cl02241"
                     /db_xref="CDD:470503"
     CDS             1..192
                     /gene="LOC107933029"
                     /coded_by="XM_016865173.2:146..724"
                     /db_xref="GeneID:107933029"
ORIGIN      
        1 masrvlstts ltplcssttf nkpkikpstn qakpflfsss ssslgfrngk ikcnavsess
       61 qgsidrtvyq gafgpwtidp edvrevllyr sglvtaassf viassaaflp dnftlkeiie
      121 nnlnliylig agglglslyl ihiyitelkr tlqafwalgv fdtniwshvh gkmfflkkln
      181 ifiskthksr ss
//
LOCUS       XP_016720663              85 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720663
VERSION     XP_016720663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865174.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..85
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=9046
     CDS             1..85
                     /gene="LOC107933029"
                     /coded_by="XM_016865174.2:157..414"
                     /db_xref="GeneID:107933029"
ORIGIN      
        1 masrvlstts ltplcssttf nkpkikpstn qakpflfsss ssslgfrngk ikcnavsess
       61 qgsidrtvyq gafgpwtidp edvre
//
LOCUS       XP_016720664             164 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH8
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016720664
VERSION     XP_016720664.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865175.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH8 isoform X1"
                     /calculated_mol_wt=19076
     Region          48..93
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          124..>164
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..164
                     /gene="LOC107933030"
                     /coded_by="XM_016865175.2:62..556"
                     /db_xref="GeneID:107933030"
ORIGIN      
        1 mdkekklkqt qeeeeemefk dcenhsqqaq qqeeekekie igdeiirski gimralaerd
       61 dpsvkevddf mirrflrard ldiekantml lkylswrrtf lpkgfvsese isnqladnkl
      121 cmqgvdkqgr pivvafggrh kptkgnleev krfvvyglek icar
//
LOCUS       XP_040942607             162 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol/phosphatidylcholine transfer protein SFH8
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942607
VERSION     XP_040942607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086673.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="phosphatidylinositol/phosphatidylcholine
                     transfer protein SFH8 isoform X2"
                     /calculated_mol_wt=18849
     Region          48..91
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          122..>162
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..162
                     /gene="LOC107933030"
                     /coded_by="XM_041086673.1:1..489"
                     /db_xref="GeneID:107933030"
ORIGIN      
        1 mdkekklkqt qeeeeemefk dcenhsqqaq qqeeekekie igdeiirski gimralaerd
       61 dpsevddfmi rrflrardld iekantmllk ylswrrtflp kgfvseseis nqladnklcm
      121 qgvdkqgrpi vvafggrhkp tkgnleevkr fvvyglekic ar
//
LOCUS       XP_040942608             911 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942608
VERSION     XP_040942608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086674.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..911
                     /product="protein MEI2-like 4 isoform X1"
                     /calculated_mol_wt=100381
     Region          259..335
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          344..414
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          748..844
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..911
                     /gene="LOC107933107"
                     /coded_by="XM_041086674.1:108..2843"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqraackk pitstmekim pvesqvtryl
       61 ehtesftkqn reanlsvdsr tvgaervsnq slkllkpvsq glgttlsfgg engfhsdegn
      121 kvntvtslse nslfsssfse fftrklrlss nnalygnsid tvasdyeeee plesleelea
      181 qtignllpdd ddlfsgvteg ldsivqpngt edaeeldvfs siggmdlgdd gpgvrknyef
      241 pekshpglln gsvagehpsr tlfvrninsn vedselkavf elygeirald sackhrgfvm
      301 isyfdiraaq kaiealqdrp lrsrkldihy sipkdnplen eenqgtlvvf nlnstvsnde
      361 ircifgayge ikeiyetpkk sqhkfiefyd vraseaalha lnkteiagnl veiqlsypes
      421 lrrcsvqqvp sagkdecypy ehayspsnda nlafsvtavg anssnnmdig trsglnsaik
      481 apfleptvhh gistgvsnsl tsmvragsig nqsviaesdh lqmkfdiqga pafypyslpe
      541 yqnglsraih ssskpleiid nksfslvsst ghsfeyrnag fpsagngshl pgrhcswsns
      601 yhpeppsmmw pnspsmvngi yaarpsaqlh glptahtlnt gvpvinyhvg saptvnpslw
      661 drrhaygges pkassfhlgs lgsmrglqll hsrsplyngr enifpitksa gspheharsr
      721 rnegsingad kkqyeldier iirgedkrtt lmlknipnky tskmllaaid ersggtydfv
      781 ylpidfknkc nvgyafinmi epsqvitfyq afngkkwekf nsekvaslay ariqgkaali
      841 ahfqnsslmn edkrcrpilf ntdgpnagdq vpfpvrvnvr trsgkaarss nneennpesp
      901 snseneanss n
//
LOCUS       XP_040942609             908 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942609
VERSION     XP_040942609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086675.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..908
                     /product="protein MEI2-like 4 isoform X2"
                     /calculated_mol_wt=100110
     Region          259..335
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          344..414
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          745..841
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..908
                     /gene="LOC107933107"
                     /coded_by="XM_041086675.1:108..2834"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqraackk pitstmekim pvesqvtryl
       61 ehtesftkqn reanlsvdsr tvgaervsnq slkllkpvsq glgttlsfgg engfhsdegn
      121 kvntvtslse nslfsssfse fftrklrlss nnalygnsid tvasdyeeee plesleelea
      181 qtignllpdd ddlfsgvteg ldsivqpngt edaeeldvfs siggmdlgdd gpgvrknyef
      241 pekshpglln gsvagehpsr tlfvrninsn vedselkavf elygeirald sackhrgfvm
      301 isyfdiraaq kaiealqdrp lrsrkldihy sipkdnplen eenqgtlvvf nlnstvsnde
      361 ircifgayge ikeiyetpkk sqhkfiefyd vraseaalha lnkteiagnl veiqlsypes
      421 lrrcsvqqvp sagkdecypy ehayspsnda nlafsvgans snnmdigtrs glnsaikapf
      481 leptvhhgis tgvsnsltsm vragsignqs viaesdhlqm kfdiqgapaf ypyslpeyqn
      541 glsraihsss kpleiidnks fslvsstghs feyrnagfps agngshlpgr hcswsnsyhp
      601 eppsmmwpns psmvngiyaa rpsaqlhglp tahtlntgvp vinyhvgsap tvnpslwdrr
      661 hayggespka ssfhlgslgs mrglqllhsr splyngreni fpitksagsp heharsrrne
      721 gsingadkkq yeldieriir gedkrttlml knipnkytsk mllaaiders ggtydfvylp
      781 idfknkcnvg yafinmieps qvitfyqafn gkkwekfnse kvaslayari qgkaaliahf
      841 qnsslmnedk rcrpilfntd gpnagdqvpf pvrvnvrtrs gkaarssnne ennpespsns
      901 eneanssn
//
LOCUS       XP_040942610             907 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942610
VERSION     XP_040942610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086676.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..907
                     /product="protein MEI2-like 4 isoform X3"
                     /calculated_mol_wt=99950
     Region          259..335
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          344..414
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          744..840
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..907
                     /gene="LOC107933107"
                     /coded_by="XM_041086676.1:108..2831"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqraackk pitstmekim pvesqvtryl
       61 ehtesftkqn reanlsvdsr tvgaervsnq slkllkpvsq glgttlsfgg engfhsdegn
      121 kvntvtslse nslfsssfse fftrklrlss nnalygnsid tvasdyeeee plesleelea
      181 qtignllpdd ddlfsgvteg ldsivqpngt edaeeldvfs siggmdlgdd gpgvrknyef
      241 pekshpglln gsvagehpsr tlfvrninsn vedselkavf elygeirald sackhrgfvm
      301 isyfdiraaq kaiealqdrp lrsrkldihy sipkdnplen eenqgtlvvf nlnstvsnde
      361 ircifgayge ikeiyetpkk sqhkfiefyd vraseaalha lnkteiagnl veiqlsypes
      421 lrrcsvqqvp sagkdecypy ehayspsnda nlafsvtavg anssnnmdig trsglnsaik
      481 apfleptvhh gistgvsnsl tsmvragsig nqsviaesdh lqmkfdiqga pafypyslpe
      541 yqnglsraih ssskpleiid nksfslvsst ghsfeyrnag fpsagngshl pgrhcswsns
      601 yhpeppsmmw pnspsmvngi yaarpsaqlh glptahtlnt gvpvinyhvg saptvnpslw
      661 drrhaygges pkassfhlgs lglqllhsrs plyngrenif pitksagsph eharsrrneg
      721 singadkkqy eldieriirg edkrttlmlk nipnkytskm llaaidersg gtydfvylpi
      781 dfknkcnvgy afinmiepsq vitfyqafng kkwekfnsek vaslayariq gkaaliahfq
      841 nsslmnedkr crpilfntdg pnagdqvpfp vrvnvrtrsg kaarssnnee nnpespsnse
      901 neanssn
//
LOCUS       XP_040942611             910 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942611
VERSION     XP_040942611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086677.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..910
                     /product="protein MEI2-like 4 isoform X4"
                     /calculated_mol_wt=100310
     Region          258..334
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          343..413
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          747..843
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..910
                     /gene="LOC107933107"
                     /coded_by="XM_041086677.1:106..2838"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqrackkp itstmekimp vesqvtryle
       61 htesftkqnr eanlsvdsrt vgaervsnqs lkllkpvsqg lgttlsfgge ngfhsdegnk
      121 vntvtslsen slfsssfsef ftrklrlssn nalygnsidt vasdyeeeep lesleeleaq
      181 tignllpddd dlfsgvtegl dsivqpngte daeeldvfss iggmdlgddg pgvrknyefp
      241 ekshpgllng svagehpsrt lfvrninsnv edselkavfe lygeiralds ackhrgfvmi
      301 syfdiraaqk aiealqdrpl rsrkldihys ipkdnplene enqgtlvvfn lnstvsndei
      361 rcifgaygei keiyetpkks qhkfiefydv raseaalhal nkteiagnlv eiqlsypesl
      421 rrcsvqqvps agkdecypye hayspsndan lafsvtavga nssnnmdigt rsglnsaika
      481 pfleptvhhg istgvsnslt smvragsign qsviaesdhl qmkfdiqgap afypyslpey
      541 qnglsraihs sskpleiidn ksfslvsstg hsfeyrnagf psagngshlp grhcswsnsy
      601 hpeppsmmwp nspsmvngiy aarpsaqlhg lptahtlntg vpvinyhvgs aptvnpslwd
      661 rrhayggesp kassfhlgsl gsmrglqllh srsplyngre nifpitksag spheharsrr
      721 negsingadk kqyeldieri irgedkrttl mlknipnkyt skmllaaide rsggtydfvy
      781 lpidfknkcn vgyafinmie psqvitfyqa fngkkwekfn sekvaslaya riqgkaalia
      841 hfqnsslmne dkrcrpilfn tdgpnagdqv pfpvrvnvrt rsgkaarssn neennpesps
      901 nseneanssn
//
LOCUS       XP_040942612             904 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942612
VERSION     XP_040942612.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086678.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..904
                     /product="protein MEI2-like 4 isoform X5"
                     /calculated_mol_wt=99678
     Region          259..335
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          344..414
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          741..837
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..904
                     /gene="LOC107933107"
                     /coded_by="XM_041086678.1:108..2822"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqraackk pitstmekim pvesqvtryl
       61 ehtesftkqn reanlsvdsr tvgaervsnq slkllkpvsq glgttlsfgg engfhsdegn
      121 kvntvtslse nslfsssfse fftrklrlss nnalygnsid tvasdyeeee plesleelea
      181 qtignllpdd ddlfsgvteg ldsivqpngt edaeeldvfs siggmdlgdd gpgvrknyef
      241 pekshpglln gsvagehpsr tlfvrninsn vedselkavf elygeirald sackhrgfvm
      301 isyfdiraaq kaiealqdrp lrsrkldihy sipkdnplen eenqgtlvvf nlnstvsnde
      361 ircifgayge ikeiyetpkk sqhkfiefyd vraseaalha lnkteiagnl veiqlsypes
      421 lrrcsvqqvp sagkdecypy ehayspsnda nlafsvgans snnmdigtrs glnsaikapf
      481 leptvhhgis tgvsnsltsm vragsignqs viaesdhlqm kfdiqgapaf ypyslpeyqn
      541 glsraihsss kpleiidnks fslvsstghs feyrnagfps agngshlpgr hcswsnsyhp
      601 eppsmmwpns psmvngiyaa rpsaqlhglp tahtlntgvp vinyhvgsap tvnpslwdrr
      661 hayggespka ssfhlgslgl qllhsrsply ngrenifpit ksagspheha rsrrnegsin
      721 gadkkqyeld ieriirgedk rttlmlknip nkytskmlla aidersggty dfvylpidfk
      781 nkcnvgyafi nmiepsqvit fyqafngkkw ekfnsekvas layariqgka aliahfqnss
      841 lmnedkrcrp ilfntdgpna gdqvpfpvrv nvrtrsgkaa rssnneennp espsnsenea
      901 nssn
//
LOCUS       XP_040942613             907 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040942613
VERSION     XP_040942613.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086679.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..907
                     /product="protein MEI2-like 4 isoform X6"
                     /calculated_mol_wt=100039
     Region          258..334
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          343..413
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          744..840
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..907
                     /gene="LOC107933107"
                     /coded_by="XM_041086679.1:106..2829"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqrackkp itstmekimp vesqvtryle
       61 htesftkqnr eanlsvdsrt vgaervsnqs lkllkpvsqg lgttlsfgge ngfhsdegnk
      121 vntvtslsen slfsssfsef ftrklrlssn nalygnsidt vasdyeeeep lesleeleaq
      181 tignllpddd dlfsgvtegl dsivqpngte daeeldvfss iggmdlgddg pgvrknyefp
      241 ekshpgllng svagehpsrt lfvrninsnv edselkavfe lygeiralds ackhrgfvmi
      301 syfdiraaqk aiealqdrpl rsrkldihys ipkdnplene enqgtlvvfn lnstvsndei
      361 rcifgaygei keiyetpkks qhkfiefydv raseaalhal nkteiagnlv eiqlsypesl
      421 rrcsvqqvps agkdecypye hayspsndan lafsvganss nnmdigtrsg lnsaikapfl
      481 eptvhhgist gvsnsltsmv ragsignqsv iaesdhlqmk fdiqgapafy pyslpeyqng
      541 lsraihsssk pleiidnksf slvsstghsf eyrnagfpsa gngshlpgrh cswsnsyhpe
      601 ppsmmwpnsp smvngiyaar psaqlhglpt ahtlntgvpv inyhvgsapt vnpslwdrrh
      661 ayggespkas sfhlgslgsm rglqllhsrs plyngrenif pitksagsph eharsrrneg
      721 singadkkqy eldieriirg edkrttlmlk nipnkytskm llaaidersg gtydfvylpi
      781 dfknkcnvgy afinmiepsq vitfyqafng kkwekfnsek vaslayariq gkaaliahfq
      841 nsslmnedkr crpilfntdg pnagdqvpfp vrvnvrtrsg kaarssnnee nnpespsnse
      901 neanssn
//
LOCUS       XP_040942614             903 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MEI2-like 4 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040942614
VERSION     XP_040942614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086680.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..903
                     /product="protein MEI2-like 4 isoform X7"
                     /calculated_mol_wt=99607
     Region          258..334
                     /region_name="RRM1_MEI2_like"
                     /note="RNA recognition motif 1 (RRM1) found in plant
                     Mei2-like proteins; cd12524"
                     /db_xref="CDD:409944"
     Region          343..413
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          740..836
                     /region_name="RRM_2"
                     /note="RNA recognition motif 2; pfam04059"
                     /db_xref="CDD:112856"
     CDS             1..903
                     /gene="LOC107933107"
                     /coded_by="XM_041086680.1:106..2817"
                     /db_xref="GeneID:107933107"
ORIGIN      
        1 mpsetmdfqt fsddilfptg rqvgfwksdp mleqrackkp itstmekimp vesqvtryle
       61 htesftkqnr eanlsvdsrt vgaervsnqs lkllkpvsqg lgttlsfgge ngfhsdegnk
      121 vntvtslsen slfsssfsef ftrklrlssn nalygnsidt vasdyeeeep lesleeleaq
      181 tignllpddd dlfsgvtegl dsivqpngte daeeldvfss iggmdlgddg pgvrknyefp
      241 ekshpgllng svagehpsrt lfvrninsnv edselkavfe lygeiralds ackhrgfvmi
      301 syfdiraaqk aiealqdrpl rsrkldihys ipkdnplene enqgtlvvfn lnstvsndei
      361 rcifgaygei keiyetpkks qhkfiefydv raseaalhal nkteiagnlv eiqlsypesl
      421 rrcsvqqvps agkdecypye hayspsndan lafsvganss nnmdigtrsg lnsaikapfl
      481 eptvhhgist gvsnsltsmv ragsignqsv iaesdhlqmk fdiqgapafy pyslpeyqng
      541 lsraihsssk pleiidnksf slvsstghsf eyrnagfpsa gngshlpgrh cswsnsyhpe
      601 ppsmmwpnsp smvngiyaar psaqlhglpt ahtlntgvpv inyhvgsapt vnpslwdrrh
      661 ayggespkas sfhlgslglq llhsrsplyn grenifpitk sagsphehar srrnegsing
      721 adkkqyeldi eriirgedkr ttlmlknipn kytskmllaa idersggtyd fvylpidfkn
      781 kcnvgyafin miepsqvitf yqafngkkwe kfnsekvasl ayariqgkaa liahfqnssl
      841 mnedkrcrpi lfntdgpnag dqvpfpvrvn vrtrsgkaar ssnneennpe spsnsenean
      901 ssn
//
LOCUS       XP_016720751             363 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor ASR3 [Gossypium hirsutum].
ACCESSION   XP_016720751
VERSION     XP_016720751.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865262.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720751.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..363
                     /product="trihelix transcription factor ASR3"
                     /calculated_mol_wt=39578
     Region          49..123
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..363
                     /gene="LOC107933111"
                     /coded_by="XM_016865262.2:217..1308"
                     /db_xref="GeneID:107933111"
ORIGIN      
        1 maseqlsmaa tpdpidgrkd avnaaingve srpvsvdcgd dvskaprlpr wtrqeilvli
       61 qgkrvaenrv rrgraaglaf gsgqvepkwa svssyckrhg vnrgpvqcrk rwsnlagdfk
      121 kikewennir eesesfwvmr ndlrrerklp gffdkevydi ldgaaavssa veipdsvvap
      181 alalaltptp avqdtaedne avfdsgrsaa aedglfsdfe qddgagspek velpvsadag
      241 ksvpapipis eqqyqqqpai pgsksqgttk ekhptsnpev gsasqearkr krtetngdee
      301 pdnspqyrli dvlekngkml vaqleaqntn fqqerqqrkd hadslvavln kladalgria
      361 dkl
//
LOCUS       XP_016720733             827 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD3 [Gossypium
            hirsutum].
ACCESSION   XP_016720733
VERSION     XP_016720733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..827
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD3"
                     /calculated_mol_wt=92304
     Region          14..215
                     /region_name="BAR_SFC_plant"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of the plant
                     protein SCARFACE (SFC); cd07606"
                     /db_xref="CDD:153290"
     Site            order(22,25..26,30,32..33,36..37,39..40,50..51,53..54,
                     57..58,60..61,64,81,84..85,177,180..181,183,188,191..192,
                     194..195,198..199,202..203,205..206,209..210,212..213)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153290"
     Region          292..429
                     /region_name="PH_ACAP"
                     /note="ArfGAP with coiled-coil, ankyrin repeat and PH
                     domains Pleckstrin homology (PH) domain; cd13250"
                     /db_xref="CDD:270070"
     Region          499..628
                     /region_name="ArfGap"
                     /note="GTPase-activating protein (GAP) for the ADP
                     ribosylation factors (ARFs); cd08204"
                     /db_xref="CDD:350058"
     Site            order(511,514,531,534,539)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350058"
     Site            order(511,514,531,534)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350058"
     Region          <732..826
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(734,736,740..741,744..746,748..749,753,756,765,767,
                     769,773..774,777..779,781..782,786,789,798,800,802,
                     806..807,810,813..814,816..817,821)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          734..765
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          767..798
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..827
                     /gene="LOC107933093"
                     /coded_by="XM_016865244.2:384..2867"
                     /db_xref="GeneID:107933093"
ORIGIN      
        1 mhfaklddsp mfrkqmqcme esaellrers lrffkgcrky teglgegydg diafanalem
       61 fggghndnis vafggpvmtk ftialreigt ykeilrsqve telnerlvqf vdtdllevke
      121 arkrfdkasl iydqarekfl slrkstksdi vnvleeelhn arstfeqarf nlvtalstve
      181 akkrfeflea vsgtmdahrr yfkqgyellh qmepyinqvl tyarqsrers nyeqaalner
      241 mqeykrqvar esrwssngsp ngdgiqaigr sshkmieavm qsaakgkvqt irqgylskrs
      301 snlrgdwkrr ffvldsrgml yyyrkqisks sgsaghlsgq rnnsdlgsgl lgrwlsshnh
      361 ggvhdeksva hhtvnlltst ikvdadqsdl rfcfriispt knytlqaesa ldqmdwieki
      421 tgviasllns qapetclsss pmgsghhrst sessfessdf dhtagqeyts ernlvnahne
      481 hqskaslhlr ssikiekpid vlqrvcgndk cadcgapepd waslnlgvlv ciecsgvhrn
      541 lgvhiskvrs ltldvkvwep sviglfqslg ntfansvwee flqsrsalhv dltltgcyks
      601 dklqllltgk pchtdsisak ekfihakyae klfvrkpkdk qhpnpvaqqi wegvhandkk
      661 avyryivsce adinavyeqs pgpsltlaka lllqehanad nsssyitads sdrssassfn
      721 lvgtsesqit ddldgctllh lacetadigm lelllqcgan inamdsrsqt plhrcihrgk
      781 tafakllltr gadphainre gktplklave sdisdsevla lladanr
//
LOCUS       XP_016720679             190 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIFY 9 [Gossypium hirsutum].
ACCESSION   XP_016720679
VERSION     XP_016720679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..190
                     /product="protein TIFY 9"
                     /calculated_mol_wt=21048
     Region          101..131
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          166..188
                     /region_name="Jas_motif"
                     /note="Jas motif; pfam09425"
                     /db_xref="CDD:430603"
     CDS             1..190
                     /gene="LOC107933043"
                     /coded_by="XM_016865190.2:182..754"
                     /db_xref="GeneID:107933043"
ORIGIN      
        1 msratveldf fgmekansck sqfqkfldrr rsfrgiqgai skmnpeliks viasgstnrn
       61 pvdwrksfsv psspkedrst slpslpllnp alrstpseds petapltify ngtvsvinvp
      121 rdkaesifkl avegssknie svdsskaanp ssdqqnllea rngdlpiarr kslqrflekr
      181 kerltspyaw
//
LOCUS       XP_040942615              95 aa            linear   PLN 06-AUG-2024
DEFINITION  GEM-like protein 5 [Gossypium hirsutum].
ACCESSION   XP_040942615
VERSION     XP_040942615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086681.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..95
                     /product="GEM-like protein 5"
                     /calculated_mol_wt=10062
     CDS             1..95
                     /gene="LOC121203268"
                     /coded_by="XM_041086681.1:105..392"
                     /db_xref="GeneID:121203268"
ORIGIN      
        1 maakpegnsk veeephepsp ttiadapqpk lddhhhhhqq ssaneprsss sseedtkqwg
       61 thvmgppaip vvhpdnqmaa lwvaggdlns gplpk
//
LOCUS       XP_016720713             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720713
VERSION     XP_016720713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19698
     CDS             1..181
                     /gene="LOC107933074"
                     /coded_by="XM_016865224.2:95..640"
                     /db_xref="GeneID:107933074"
ORIGIN      
        1 mtapptaait aalrncslnh ettttgvgsl eeegnirrpt apkdnddvlq ngtvsgttld
       61 lnphlsiphy reqclvletg edpktaaeyg gesysenddd gggddddnnw ydseesspss
      121 sfsssrdykn dhhshgieee nddvlvvagc kscymyfmva kktegcpkcn gqllrfdhhh
      181 e
//
LOCUS       XP_016720717             130 aa            linear   PLN 06-AUG-2024
DEFINITION  GSH-induced LITAF domain protein [Gossypium hirsutum].
ACCESSION   XP_016720717
VERSION     XP_016720717.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720717.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..130
                     /product="GSH-induced LITAF domain protein"
                     /calculated_mol_wt=14406
     Region          44..100
                     /region_name="LITAF"
                     /note="Possible membrane-associated motif in LPS-induced
                     tumor necrosis factor alpha factor (LITAF), also known as
                     PIG7, and other animal proteins; smart00714"
                     /db_xref="CDD:197841"
     CDS             1..130
                     /gene="LOC107933080"
                     /coded_by="XM_016865228.2:342..734"
                     /db_xref="GeneID:107933080"
ORIGIN      
        1 mfkkhdepvv gvpyfvgvnp yqasviygdp kgipihqtmy rdtpapfncp ycgnsgltiv
       61 rskpslaayv acmmpfmlgi cflcpsmdcl whkyhycpac tekvadfekt dpcavvdmpq
      121 wvqesfalpa
//
LOCUS       XP_040942616             362 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_040942616
VERSION     XP_040942616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086682.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..362
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta-2, mitochondrial"
                     /calculated_mol_wt=39127
     Region          9..361
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..362
                     /gene="LOC107933123"
                     /coded_by="XM_041086682.1:189..1277"
                     /db_xref="GeneID:107933123"
ORIGIN      
        1 mlgivrqkml eqslkkirpa vsvlrsyssa akqmtvreal nsaldeemsa dskvflmgee
       61 vgeyqgayki tkglldkygp ervldtpite agftgiavga ayygvkpvve fmtfnfsmqa
      121 idhiinsaak tnymssgris vpivfrgpng aaagvgaqhs qcyaawyasc pglkvlapys
      181 sedargllka girdpdpvvf lenellyges fpvsdevlds sfclpigkak ierkgkdvti
      241 aayskmvgya lkaaetlekd gidaevinlr sirpldrsti nasvrktnrl vtveeafpqh
      301 gvgaeicasi veesfaylda pveriagadv pmpyaanler mavpqvediv raakrtcyrs
      361 vs
//
LOCUS       XP_016720683             217 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat protein 1 [Gossypium hirsutum].
ACCESSION   XP_016720683
VERSION     XP_016720683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..217
                     /product="leucine-rich repeat protein 1"
                     /calculated_mol_wt=24076
     Region          28..>181
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..217
                     /gene="LOC107933045"
                     /coded_by="XM_016865194.2:292..945"
                     /db_xref="GeneID:107933045"
ORIGIN      
        1 mamhnlvqal vfvavffntl aptvanvegd alyalrrsvk dpknvlkswd ptlvdpctwf
       61 hvtcdadnrv trldlgnakl kgrlvpqlgk lerlqylely mnnlegsipe eigglkslvs
      121 ldlynnnltg sipaslskls nlnflrlngn rltgriprql tklpnlkifd vsnndlcgti
      181 pttgsfskfs eesfknnsrl egpelmgfvr ydtgrck
//
LOCUS       XP_016720747             463 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase PBS1 [Gossypium hirsutum].
ACCESSION   XP_016720747
VERSION     XP_016720747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865258.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..463
                     /product="serine/threonine-protein kinase PBS1"
                     /calculated_mol_wt=50839
     Region          91..359
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(91..95,99,112,114,143,159..162,166,168,212,214,
                     216..217,219,230,233,251..254)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(91..95,99,112,114,143,159..162,166,212,214,216..217,
                     219,230)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(95,166,168,212,214,216,233,251..254)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(229..236,247..254)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..463
                     /gene="LOC107933106"
                     /coded_by="XM_016865258.2:413..1804"
                     /db_xref="GeneID:107933106"
ORIGIN      
        1 mgcfpcfdsk eeeklntvne sndpkqaqpt vssnisslss ggdrlrsrsn ggskrelpcp
       61 rdgpgvqiaa hifsfrelaa atknfrpesf lgeggfghvy kgqlestgqv vavkqldrng
      121 lqgnreflve vlmlsllhhp nlvnligyca dgdqrllvye fmplgsledh lhdlppgkep
      181 ldwntrmkia agaakgleyl hdkanppviy rdfkssnill eegfhpklsd fglaklgpvg
      241 dkshvstrvm gtygycapey amtgqltvks dvysfgvvfl elitgrkaid strphgeqnl
      301 itwarplftn rrklskladp llqgrfpmrg lyqalavasm ciqeeaaarp higdvvtals
      361 ylanqaydpn asghghsgsg etdekryrdd rggrvsknde ggvsgcrwdl egsekddspk
      421 etarmlnrdl dreravaeak mwgenwrekr rqsaqgssdg sng
//
LOCUS       XP_016720753             463 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase PBS1 [Gossypium hirsutum].
ACCESSION   XP_016720753
VERSION     XP_016720753.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865264.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720753.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..463
                     /product="serine/threonine-protein kinase PBS1"
                     /calculated_mol_wt=51086
     Region          91..359
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(91..95,99,112,114,143,159..162,166,168,212,214,
                     216..217,219,230,233,251..254)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(91..95,99,112,114,143,159..162,166,212,214,216..217,
                     219,230)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(95,166,168,212,214,216,233,251..254)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(229..236,247..254)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..463
                     /gene="LOC107933113"
                     /coded_by="XM_016865264.2:307..1698"
                     /db_xref="GeneID:107933113"
ORIGIN      
        1 mgcfscfdsk eeeklnavne tndpkrpqpi vssnisrlss ggdrlrsrsn ggskreipsl
       61 rdgpgvqiaa qtfsfrelaa atknfrpesf lgeggfgrvy kgrlestgqv vavkqldrng
      121 lqgnreflve vlmlsllhhp nlvnligyca dgdqrllvye fmplgsledh lhdlppskep
      181 ldwntrmkia agaakgleyl hdkanppviy rdfkssnill eegfhpklsd fglaklgpvg
      241 dkshvstrvm gtygycapey amtgqltvks dvysfgvvfl elitgrkaid ssqphgeqnl
      301 itwarplfnn rrklskladp llqgrfpmrg lyqalavasm ciqeeaatrp ligdvvtals
      361 ylanqaydpn ttgnghrgsg etdekryrdd rggrvsknde ggvsgckwdl egsekedspr
      421 etarmlnrdl dreravaeak mwgenwrekr rqsaqgssdg sng
//
LOCUS       XP_016720690             311 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET15 [Gossypium hirsutum].
ACCESSION   XP_016720690
VERSION     XP_016720690.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720690.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="bidirectional sugar transporter SWEET15"
                     /calculated_mol_wt=34509
     Region          14..98
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     Region          133..216
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..311
                     /gene="LOC107933053"
                     /coded_by="XM_016865201.2:157..1092"
                     /db_xref="GeneID:107933053"
ORIGIN      
        1 maimsdhhaw avafgvlgni isilvflapl stfyriykkk stesfqslpy qvalfscmlw
       61 lyyalikkga fllitinsfg civetlyism flayaprksr isaiklfaam nlglfslili
      121 vthflvknsi riqvlgwinv aisvsvfaap lnittrvikt ksvefmpfnl slaltlsaim
      181 wfaygafikd lcvavpnvvg filgmfqmil yaiyrntdkv invedkkvpe eqttttttis
      241 vlsklgssev hpididtikn pnqnttnqgd gnendhtiev dddddddddg ssshqkslel
      301 sseihldesp v
//
LOCUS       XP_016720744             481 aa            linear   PLN 06-AUG-2024
DEFINITION  5-methylthioadenosine/S-adenosylhomocysteine deaminase [Gossypium
            hirsutum].
ACCESSION   XP_016720744
VERSION     XP_016720744.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865255.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..481
                     /product="5-methylthioadenosine/S-adenosylhomocysteine
                     deaminase"
                     /calculated_mol_wt=53015
     Region          20..444
                     /region_name="ATZ_TRZ_like"
                     /note="TRZ/ATZ family contains enzymes from the atrazine
                     degradation pathway and related hydrolases. Atrazine, a
                     chlorinated herbizide, can be catabolized by a variety of
                     different bacteria. The first three steps of the atrazine
                     dehalogenation pathway are...; cd01298"
                     /db_xref="CDD:238623"
     Site            order(85,87,241,244,280,330)
                     /site_type="active"
                     /db_xref="CDD:238623"
     Site            order(111,114,144..145,167..168)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238623"
     CDS             1..481
                     /gene="LOC107933103"
                     /coded_by="XM_016865255.2:108..1553"
                     /db_xref="GeneID:107933103"
ORIGIN      
        1 metkssgvag ggsvsesstm ilhnavvvtm dsdcrvfqng avfidkdkik aigqspdilq
       61 qfshvahhil dlhgqillpg fvnthvhtsq qlgrgiaddv dlmtwlhhri wpyesnmtee
      121 dsyistllcg velihsgvtc faeaggqhvt gmaravellg lracltdsvm dsgdglppsw
      181 girttdeclq sqmklyekhn ntadgririw lgirtvmnst drllletrda arelktgihm
      241 hvaeipyenq vvmetrkvdh gtvtfldkid flqenllaah tvcindteig flsrsgvkvs
      301 hcpasamrml gfariremln agitvslgtd gapsnnrmsi vdemylasli nkgrevyeng
      361 atdptafpae tllkmvting aksvlwdnei gsleigkkad mvvinpfsws mvpihdcisn
      421 lvycmrteni vsvmcngrwi mrdkmilnvd eeevislake asskllrrag iklpsrmnvi
      481 h
//
LOCUS       XP_016720758             259 aa            linear   PLN 06-AUG-2024
DEFINITION  photosynthetic NDH subunit of lumenal location 5, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016720758
VERSION     XP_016720758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865269.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..259
                     /product="photosynthetic NDH subunit of lumenal location
                     5, chloroplastic"
                     /calculated_mol_wt=27979
     Region          91..252
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(143..144,149,200,202,210)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..259
                     /gene="LOC107933119"
                     /coded_by="XM_016865269.2:183..962"
                     /db_xref="GeneID:107933119"
ORIGIN      
        1 masslttlsn vgllssprtp pknqpistsc nsfnfprtls lspkisssss sfsgsfrfpr
       61 fnspqtnnhr vrrsvratae vapiqskitn kvffdvsign pvgklagkiv iglygddvpq
      121 ttenfralct gekgfgykgs afhrvikdfm iqggdfdkgn gtggksiygr tfkdenfkls
      181 hagpgvvsma nagpntngsq ffictvktpw ldqrhvvfgq vlegmdtvkl iesqetdrgd
      241 rprkkvvisd cgelpmset
//
LOCUS       XP_016720761             450 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR4 [Gossypium hirsutum].
ACCESSION   XP_016720761
VERSION     XP_016720761.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720761.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="ACT domain-containing protein ACR4"
                     /calculated_mol_wt=50322
     Region          36..105
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          126..199
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          259..333
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          337..408
                     /region_name="ACT_ACR_4"
                     /note="C-terminal ACT domain, of a novel type of ACT
                     domain-containing protein which is composed almost
                     entirely of four ACT domain repeats (the 'ACR' protein);
                     cd04926"
                     /db_xref="CDD:153198"
     CDS             1..450
                     /gene="LOC107933121"
                     /coded_by="XM_016865272.2:272..1624"
                     /db_xref="GeneID:107933121"
ORIGIN      
        1 mdcwsssltv deefeklvir mnpprvtvdn atsrnatlik vdsankrgsl levvqvltdl
       61 dllirrayis sdgewfmdvf hvtdqhgnkl sevdvaekiq qqlgprsysf rsltrsvgvq
      121 aaskqtiiel tgrdrpglls eifavltdlk cnvvaaevwt hnsrmasvvy iadettglsi
      181 dnperltkik qlllyvlkgd rdkmnantav slgsmhkerr lhqmmyadrd ydmsdansgs
      241 tsdrskplvt vencehkgyt vvnlrcpdrp kllfdtvctl tdmqyvvyha tviaegpeay
      301 qeyyirhmdg cpisskaeqq rvihcleaai krrasegirl elcsddrvgl lsdvtrifre
      361 nglsvtraev ktrgsqavni fyvtdasgnp vksetieavr keigltilhv kddanskspl
      421 qeslifslgt lfksrsekil ynlglikscs
//
LOCUS       XP_016720736             598 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate 1-dehydrogenase, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016720736
VERSION     XP_016720736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..598
                     /product="glucose-6-phosphate 1-dehydrogenase,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=67619
     Region          1..596
                     /region_name="PLN02333"
                     /note="glucose-6-phosphate 1-dehydrogenase"
                     /db_xref="CDD:215191"
     CDS             1..598
                     /gene="LOC107933096"
                     /coded_by="XM_016865247.2:285..2081"
                     /db_xref="GeneID:107933096"
ORIGIN      
        1 mstfssmhsp syshsficss sinekknqrf vfssfprfsv panakvflqc qanshqnavl
       61 mqdgavatkv spveketpie klksellsvt ssnewdekag fdinenestv sitvvgasgd
      121 lakkkifpal falyyegclp khftvygyar skmtdaelrn mvsktltcri dkrencgekm
      181 eeflkrcfyh sgqydseenf aqldkklkeh eggkvsnrlf ylsippnifi davkcasssa
      241 ssgngwtrvi vekpfgrdsd ssaaltkalk qyltedqifr idhylgkelv enlsvlrfsn
      301 lifeplwsrq yirnvqlifs edfgtegrgg yfdhygiird imqnhllqil alfametpvs
      361 ldaedirnek vkvlrsmrpl qledvvigqy kshskggvty paytddktvp kdsltptfaa
      421 aalfidnarw dgvpflmkag kalhnkraei rvqfrhvpgn lynrnfgtdl dqatnelvir
      481 vqpdeaiylk innkvpglgm rldcsnlnlh yaaryskeip dayerlllda iegerrlfir
      541 sdeldaawsl ftpvlaelee kkimpeyypy gsrgpvgahy laarynvrwg dlgldqsa
//
LOCUS       XP_040942617             563 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate 1-dehydrogenase, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942617
VERSION     XP_040942617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086683.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..563
                     /product="glucose-6-phosphate 1-dehydrogenase,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=63989
     Region          29..561
                     /region_name="PLN02333"
                     /note="glucose-6-phosphate 1-dehydrogenase"
                     /db_xref="CDD:215191"
     CDS             1..563
                     /gene="LOC107933096"
                     /coded_by="XM_041086683.1:29..1720"
                     /db_xref="GeneID:107933096"
ORIGIN      
        1 mlrcffnvkq irikmlssck mvswvfffga vatkvspvek etpieklkse llsvtssnew
       61 dekagfdine nestvsitvv gasgdlakkk ifpalfalyy egclpkhftv ygyarskmtd
      121 aelrnmvskt ltcridkren cgekmeeflk rcfyhsgqyd seenfaqldk klkeheggkv
      181 snrlfylsip pnifidavkc asssassgng wtrvivekpf grdsdssaal tkalkqylte
      241 dqifridhyl gkelvenlsv lrfsnlifep lwsrqyirnv qlifsedfgt egrggyfdhy
      301 giirdimqnh llqilalfam etpvsldaed irnekvkvlr smrplqledv vigqykshsk
      361 ggvtypaytd dktvpkdslt ptfaaaalfi dnarwdgvpf lmkagkalhn kraeirvqfr
      421 hvpgnlynrn fgtdldqatn elvirvqpde aiylkinnkv pglgmrldcs nlnlhyaary
      481 skeipdayer llldaieger rlfirsdeld aawslftpvl aeleekkimp eyypygsrgp
      541 vgahylaary nvrwgdlgld qsa
//
LOCUS       XP_016720689             268 aa            linear   PLN 06-AUG-2024
DEFINITION  myelin transcription factor 1 [Gossypium hirsutum].
ACCESSION   XP_016720689
VERSION     XP_016720689.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720689.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..268
                     /product="myelin transcription factor 1"
                     /calculated_mol_wt=30635
     CDS             1..268
                     /gene="LOC107933049"
                     /coded_by="XM_016865200.2:86..892"
                     /db_xref="GeneID:107933049"
ORIGIN      
        1 mdsikakkiq amkkyrktqf sshnflhfva vfgililssf wsinpslcss mkqfviislp
       61 ciwssffnpk clfivvnviv vflvgesglv gskvspgrdv ydeyvkrnrr vrgvsvsttv
      121 prevgdykam dseegkggfd qteeeeeeee kglfevkevi tseaesgeee qtreveeeee
      181 ekgsfevkdv itskvdplee ertceikeek glievketkt wkvehgrsiv edhqeielpe
      241 fnkrveefia rvnkqrwmea qslgsckv
//
LOCUS       XP_040942618             694 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040942618
VERSION     XP_040942618.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086684.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..694
                     /product="ATP-dependent zinc metalloprotease FTSH 2,
                     chloroplastic"
                     /calculated_mol_wt=74349
     Region          90..683
                     /region_name="ftsH"
                     /note="cell division protein; Validated; CHL00176"
                     /db_xref="CDD:214386"
     CDS             1..694
                     /gene="LOC121213707"
                     /coded_by="XM_041086684.1:294..2378"
                     /db_xref="GeneID:121213707"
ORIGIN      
        1 maassacllg nglsthrtks klskdfygrn ivftpaissl grksnavlvk aslklkqheg
       61 rrgflksllg tagigvpall gngkayadeq gvsssrmsys rfleyldkdr vkkvdlfeng
      121 tiaiveavsp elgnrvqrvr vqlpglsqel lqkfreknid faahnaqeds gsllfnlign
      181 lafpliligg lfllsrrssg gmggpggpgf plafgqskak fqmepntgvt fddvagvdea
      241 kqdfmevvef lkkperftav garipkgvll igppgtgktl lakaiageag vpffsisgse
      301 fvemfvgvga srvrdlfkka kenapcivfv deidavgrqr gtgigggnde reqtlnqllt
      361 emdgfegntg iiviaatnra dildsallrp grfdrqvtvd vpdirgrtei lkvhgsnkkf
      421 etdvsfdvia mrtpgfsgad lanllneaai lagrrgktai sskeiddsid rivagmegtv
      481 mtdgkskslv ayhevghaic gtltpghdpv qkvtliprgq argltwfips ddptliskqq
      541 lfarivgglg graaeeiifg epevttgaag dlqqitglak qmvvtfgmse igpwslmdss
      601 aqsadvimrm marnsmsekl aedidtavkr lsdsayeial qhirnnreai dkivevliek
      661 etmsgdefra ilsefveipa enqvppsvpt pvsv
//
LOCUS       XP_040942619             694 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040942619
VERSION     XP_040942619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086685.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..694
                     /product="ATP-dependent zinc metalloprotease FTSH 2,
                     chloroplastic"
                     /calculated_mol_wt=74349
     Region          90..683
                     /region_name="ftsH"
                     /note="cell division protein; Validated; CHL00176"
                     /db_xref="CDD:214386"
     CDS             1..694
                     /gene="LOC121213707"
                     /coded_by="XM_041086685.1:104..2188"
                     /db_xref="GeneID:121213707"
ORIGIN      
        1 maassacllg nglsthrtks klskdfygrn ivftpaissl grksnavlvk aslklkqheg
       61 rrgflksllg tagigvpall gngkayadeq gvsssrmsys rfleyldkdr vkkvdlfeng
      121 tiaiveavsp elgnrvqrvr vqlpglsqel lqkfreknid faahnaqeds gsllfnlign
      181 lafpliligg lfllsrrssg gmggpggpgf plafgqskak fqmepntgvt fddvagvdea
      241 kqdfmevvef lkkperftav garipkgvll igppgtgktl lakaiageag vpffsisgse
      301 fvemfvgvga srvrdlfkka kenapcivfv deidavgrqr gtgigggnde reqtlnqllt
      361 emdgfegntg iiviaatnra dildsallrp grfdrqvtvd vpdirgrtei lkvhgsnkkf
      421 etdvsfdvia mrtpgfsgad lanllneaai lagrrgktai sskeiddsid rivagmegtv
      481 mtdgkskslv ayhevghaic gtltpghdpv qkvtliprgq argltwfips ddptliskqq
      541 lfarivgglg graaeeiifg epevttgaag dlqqitglak qmvvtfgmse igpwslmdss
      601 aqsadvimrm marnsmsekl aedidtavkr lsdsayeial qhirnnreai dkivevliek
      661 etmsgdefra ilsefveipa enqvppsvpt pvsv
//
LOCUS       XP_040942620             751 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter D family member 2, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942620
VERSION     XP_040942620.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086686.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..751
                     /product="ABC transporter D family member 2, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=84426
     Region          94..724
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..751
                     /gene="LOC121213708"
                     /coded_by="XM_041086686.1:142..2397"
                     /db_xref="GeneID:121213708"
ORIGIN      
        1 mivaqmalcs ypylrlhttt spfepsnghh ihhhplfskp krletrnsns nsnplnikcf
       61 astsqsksqs qsppplppfk degeerkfsd lnmlfrrfwk vaapywfsdd kvqarlqlag
      121 vfaltlattg isvgfnflgr dffnalankd eeqfskqlly ylcgfaggip ffvlrdyare
      181 tlslrwrcwm tsyfmqrylt drtfykiqsq siidnpdqri vddlssftst alsfsltlfn
      241 aavdlisfsn ilytiypplf vvlllysigg tvvsiflgkg lvtlnflqek keadfryglv
      301 rvrenaesia fyggednelq lllqrftsaf enltqlliss rnlefftngy ryliqivpaa
      361 vvapmyfsgk iefgvinqsv safshilgdv slvvyqfqai safsavidrl gefddildss
      421 rskslsdpme yinltyshvk gsqvldsngs tppttsprll dvesltlktp ksnstlvrdl
      481 sfaidekdnl lvvgpsgsgk tsllralagl wntgkgkitf yvekagdaqs ptssemapve
      541 ensanvneef grpinsnsks vfflpqrpym vlgslrqqll yptwteevvv sdttkpggsl
      601 pfltqvpnsk nvsekhrvpv pttddltqvl edvrigyils rfkgldtvye wssvlslgeq
      661 qrlafarlll skpklallde stsaldevne ahlyekmkaa gityisighr rtlyayhnrv
      721 ldissadads rqrnwnikfi eqdtlhnflk l
//
LOCUS       XP_040942621             601 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter D family member 2, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942621
VERSION     XP_040942621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086687.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..601
                     /product="ABC transporter D family member 2, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=67595
     Region          21..574
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..601
                     /gene="LOC121213708"
                     /coded_by="XM_041086687.1:44..1849"
                     /db_xref="GeneID:121213708"
ORIGIN      
        1 mitrqlakdw tvtkdtsffq ffvlrdyare tlslrwrcwm tsyfmqrylt drtfykiqsq
       61 siidnpdqri vddlssftst alsfsltlfn aavdlisfsn ilytiypplf vvlllysigg
      121 tvvsiflgkg lvtlnflqek keadfryglv rvrenaesia fyggednelq lllqrftsaf
      181 enltqlliss rnlefftngy ryliqivpaa vvapmyfsgk iefgvinqsv safshilgdv
      241 slvvyqfqai safsavidrl gefddildss rskslsdpme yinltyshvk gsqvldsngs
      301 tppttsprll dvesltlktp ksnstlvrdl sfaidekdnl lvvgpsgsgk tsllralagl
      361 wntgkgkitf yvekagdaqs ptssemapve ensanvneef grpinsnsks vfflpqrpym
      421 vlgslrqqll yptwteevvv sdttkpggsl pfltqvpnsk nvsekhrvpv pttddltqvl
      481 edvrigyils rfkgldtvye wssvlslgeq qrlafarlll skpklallde stsaldevne
      541 ahlyekmkaa gityisighr rtlyayhnrv ldissadads rqrnwnikfi eqdtlhnflk
      601 l
//
LOCUS       XP_040942622             372 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-T1-4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942622
VERSION     XP_040942622.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086688.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="cyclin-T1-4 isoform X1"
                     /calculated_mol_wt=42826
     Region          156..279
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          283..372
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     CDS             1..372
                     /gene="LOC121213710"
                     /coded_by="XM_041086688.1:260..1378"
                     /db_xref="GeneID:121213710"
ORIGIN      
        1 msftrncrmq gsvfqddyrc pfnrnnynny ssdnyrngnw ssdptrifnh aqeflgqfge
       61 hnrgyhhaqp ncapslkrrk fsaatwgdsg rnyqpyslqf ptaplepsnf ipppmrstae
      121 astsvsnkrd rsqleddesv fmsrddiery spsrrdgida lrethlrysy cafiqnlglq
      181 lelpqttigt amvlchrffv rrshachdrf liataalfla akseetprpl nnvlrtscei
      241 fhkqditfls yllpvdwfeq yrervieaeq milttlnfel nvqhpyaplt silnklglsq
      301 talvnlalnl vseglrsslw lqfkphhiaa gaaylaakfl nfdlasyhdi wrefqttpai
      361 lqdvsqqlme lf
//
LOCUS       XP_040942623             324 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-T1-4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942623
VERSION     XP_040942623.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086689.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..324
                     /product="cyclin-T1-4 isoform X2"
                     /calculated_mol_wt=37052
     Region          156..279
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     CDS             1..324
                     /gene="LOC121213710"
                     /coded_by="XM_041086689.1:217..1191"
                     /db_xref="GeneID:121213710"
ORIGIN      
        1 msftrncrmq gsvfqddyrc pfnrnnynny ssdnyrngnw ssdptrifnh aqeflgqfge
       61 hnrgyhhaqp ncapslkrrk fsaatwgdsg rnyqpyslqf ptaplepsnf ipppmrstae
      121 astsvsnkrd rsqleddesv fmsrddiery spsrrdgida lrethlrysy cafiqnlglq
      181 lelpqttigt amvlchrffv rrshachdrf liataalfla akseetprpl nnvlrtscei
      241 fhkqditfls yllpvdwfeq yrervieaeq milttlnfel nvqhpyaplt silnklglsq
      301 talvnlalnl vsegvisgla ctlv
//
LOCUS       XP_040942624             323 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-T1-4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942624
VERSION     XP_040942624.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086690.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..323
                     /product="cyclin-T1-4 isoform X3"
                     /calculated_mol_wt=37101
     Region          156..279
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     CDS             1..323
                     /gene="LOC121213710"
                     /coded_by="XM_041086690.1:217..1188"
                     /db_xref="GeneID:121213710"
ORIGIN      
        1 msftrncrmq gsvfqddyrc pfnrnnynny ssdnyrngnw ssdptrifnh aqeflgqfge
       61 hnrgyhhaqp ncapslkrrk fsaatwgdsg rnyqpyslqf ptaplepsnf ipppmrstae
      121 astsvsnkrd rsqleddesv fmsrddiery spsrrdgida lrethlrysy cafiqnlglq
      181 lelpqttigt amvlchrffv rrshachdrf liataalfla akseetprpl nnvlrtscei
      241 fhkqditfls yllpvdwfeq yrervieaeq milttlnfel nvqhpyaplt silnklglsq
      301 talvnlalnl vsegylfglv isl
//
LOCUS       XP_040942625             697 aa            linear   PLN 06-AUG-2024
DEFINITION  long chain acyl-CoA synthetase 6, peroxisomal isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942625
VERSION     XP_040942625.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086691.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..697
                     /product="long chain acyl-CoA synthetase 6, peroxisomal
                     isoform X1"
                     /calculated_mol_wt=76728
     Region          43..690
                     /region_name="PLN02736"
                     /note="long-chain acyl-CoA synthetase"
                     /db_xref="CDD:178337"
     Site            order(266,269..274,276..277)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341250"
     Site            order(269,384..385,446..451,533,545,548,560,667)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341250"
     Site            order(269,309..310,355,357..358,361,384..385,446..451,533,
                     545,548,557..560,644)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     Site            order(309,357..358,361,384,557..559,642,644)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341250"
     CDS             1..697
                     /gene="LOC107933060"
                     /coded_by="XM_041086691.1:113..2206"
                     /db_xref="GeneID:107933060"
ORIGIN      
        1 mdssiaerrl naihghlvpv vvvgaashsn dlrsnptage flcaekgysv vlpeklqtgk
       61 wnvyrsacsp fklvtrfpdh pdigtlhenf vhavdtfrdy kylgtrirvn gtigeykwmt
      121 ygeagtaraa igsgllfhgi pkgscvgfyf inrpewlivd yacsayslvs vplydtlgpd
      181 avkyivnhad vkaifcvpqt lnslrgffne ipsvhlivvv ggmdnelpsl ppstdiqivt
      241 yakllsegrg npqpfsppnp ndvaticyts gttgtpkgvv lthgnliana agcsiatkfy
      301 psdiyisylp lahiyergyq vllayfgvav gfyqgdnmel mndlvalrpt ifcsvprlyn
      361 riyagilsav kssgslkerl fnaaynskrq aimngnnpsp lwdklvfnki kaklggrvrf
      421 fssgasplsp dildflkicf ggrvlegygm tesscvismm degdnlsghv gspnpaceik
      481 lvdvpemnyt sddephprge icvrgpiifq gyykdevhtk evldedgwlh tgdiglwlpg
      541 grlkiidrkk nifklaqgey ispekienvy akcrfisqcf iygdslnssl vaivsvdqdv
      601 lktwaategi kykdleqlcn drtaraavls dmdaigreaq lrgfefakav tleleqftme
      661 nglltptski krhqakeyfa kaisnmyael ttsdasf
//
LOCUS       XP_040942626             696 aa            linear   PLN 06-AUG-2024
DEFINITION  long chain acyl-CoA synthetase 6, peroxisomal isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942626
VERSION     XP_040942626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086692.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..696
                     /product="long chain acyl-CoA synthetase 6, peroxisomal
                     isoform X2"
                     /calculated_mol_wt=76657
     Region          40..689
                     /region_name="PLN02736"
                     /note="long-chain acyl-CoA synthetase"
                     /db_xref="CDD:178337"
     Site            order(265,268..273,275..276)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341250"
     Site            order(268,383..384,445..450,532,544,547,559,666)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341250"
     Site            order(268,308..309,354,356..357,360,383..384,445..450,532,
                     544,547,556..559,643)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     Site            order(308,356..357,360,383,556..558,641,643)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341250"
     CDS             1..696
                     /gene="LOC107933060"
                     /coded_by="XM_041086692.1:113..2203"
                     /db_xref="GeneID:107933060"
ORIGIN      
        1 mdssiaerrl naihghlvpv vvvgaashsn dlrsnptage flcekgysvv lpeklqtgkw
       61 nvyrsacspf klvtrfpdhp digtlhenfv havdtfrdyk ylgtrirvng tigeykwmty
      121 geagtaraai gsgllfhgip kgscvgfyfi nrpewlivdy acsayslvsv plydtlgpda
      181 vkyivnhadv kaifcvpqtl nslrgffnei psvhlivvvg gmdnelpslp pstdiqivty
      241 akllsegrgn pqpfsppnpn dvaticytsg ttgtpkgvvl thgnlianaa gcsiatkfyp
      301 sdiyisylpl ahiyergyqv llayfgvavg fyqgdnmelm ndlvalrpti fcsvprlynr
      361 iyagilsavk ssgslkerlf naaynskrqa imngnnpspl wdklvfnkik aklggrvrff
      421 ssgasplspd ildflkicfg grvlegygmt esscvismmd egdnlsghvg spnpaceikl
      481 vdvpemnyts ddephprgei cvrgpiifqg yykdevhtke vldedgwlht gdiglwlpgg
      541 rlkiidrkkn ifklaqgeyi spekienvya kcrfisqcfi ygdslnsslv aivsvdqdvl
      601 ktwaategik ykdleqlcnd rtaraavlsd mdaigreaql rgfefakavt leleqftmen
      661 glltptskik rhqakeyfak aisnmyaelt tsdasf
//
LOCUS       XP_016720748             697 aa            linear   PLN 06-AUG-2024
DEFINITION  long chain acyl-CoA synthetase 6, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016720748
VERSION     XP_016720748.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865259.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720748.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..697
                     /product="long chain acyl-CoA synthetase 6, peroxisomal"
                     /calculated_mol_wt=76315
     Region          39..689
                     /region_name="PLN02736"
                     /note="long-chain acyl-CoA synthetase"
                     /db_xref="CDD:178337"
     Site            order(264,267..272,274..275)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341250"
     Site            order(267,382..383,444..449,531,543,546,558,665)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341250"
     Site            order(267,307..308,353,355..356,359,382..383,444..449,531,
                     543,546,555..558,642)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     Site            order(307,355..356,359,382,555..557,640,642)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341250"
     CDS             1..697
                     /gene="LOC107933108"
                     /coded_by="XM_016865259.2:83..2176"
                     /db_xref="GeneID:107933108"
ORIGIN      
        1 mdsssaerrl naihghlvpv vcggagshsg lrvnptagef lceqgysvvl peklktgkwn
       61 vyrsarspfk lvtrfpdhpd igtlhdnfih avdtfrdyky lgtriqadgt vgeykwmtyg
      121 eagtaraaig sgliyhgipk gsciglyfin rpewlivdha csayslvsvp lydtlgpdav
      181 kyivnhadvk aifcvpqtln sllnflseip svrlvvvvgg kenevpslpp stgiqivtyt
      241 kllsqgrrnl qpfsppkpdd vaticytsgt tgtpkgvvlt hgnlianaag cstgtkfyps
      301 dvyisylpla hiyerayqva llyfgvavgf yqgdnmklmd dlvalqptif csvprlynri
      361 yagivnavkt sgplkerlfn aaynskkhai mngkspsplw dklvfnkika klggrirfls
      421 sgasplspdv ldflkicfgc rvvegygmte tscvissmee gdnlsghvgs pspaceiklv
      481 dvpemnytsd dqpyprgeic vrgpivfqgy ykdevqtrev ldedgwlhtg diglwlsggr
      541 lkiidrkkni fklaqgeyia pekienvyak ckfiaqcfiy gdslnsslva ivsvdhdvlk
      601 awaasegiky kdlgqlcndp raraavladm dalgreaqlr gfefakavtl vlepftmeng
      661 lltptfkikr pqakeyfaka isnmyaelat sdpspkn
//
LOCUS       XP_040942627             801 aa            linear   PLN 06-AUG-2024
DEFINITION  chloride channel protein CLC-d isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942627
VERSION     XP_040942627.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086693.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..801
                     /product="chloride channel protein CLC-d isoform X1"
                     /calculated_mol_wt=88022
     Region          44..573
                     /region_name="ClC_6_like"
                     /note="ClC-6-like chloride channel proteins. This CD
                     includes ClC-6, ClC-7 and ClC-B, C, D in plants. Proteins
                     in this family are ubiquitous in eukarotes and their
                     functions are unclear. They are expressed in intracellular
                     organelles membranes. This family...; cd03685"
                     /db_xref="CDD:239657"
     Site            order(147..151,189..193,472..476,561)
                     /site_type="active"
                     /note="putative Cl- selectivity filter [active]"
                     /db_xref="CDD:239657"
     Site            191
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239657"
     Site            258
                     /site_type="active"
                     /note="putative H+/Cl- coupling transport residue
                     [active]"
                     /db_xref="CDD:239657"
     Region          576..752
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04591"
                     /db_xref="CDD:341367"
     Site            order(582,594..596,618..620,732,745,747,749..750)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341367"
     Region          582..704
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     Site            order(618,635,639..640,643,710,732..734,749)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341367"
     Region          710..752
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..801
                     /gene="LOC121213712"
                     /coded_by="XM_041086693.1:240..2645"
                     /db_xref="GeneID:121213712"
ORIGIN      
        1 mlsnhfengm dmarlawsrl phsedgeldg vgllstssnr ngvesldyev ienyayreeq
       61 aqrgkffvgy nvavkwffal ligigtglaa vfinisvenf agwkfaltfn iiqksylagf
      121 lmyilinlal vfssvyiith fapaaagsgi peikgylngi dipgillfrt ligkifgsig
      181 svggglalgk egplvhtgac iasllgqggs tkyhlssrwl qffksdrdrr dlvtcgcaag
      241 vaaafrapvg gvlfaleevt swwrsqlmwr vfftsavvav vvrvamgwck sgncghfggg
      301 gfiiwdisdg qedysfeell pmavigiigg llgalfnqlt iyvtrwrrny lhkkgnrvki
      361 yeaclisvlt svisfglpll rncspcpdsd pgseiecpra pgvdgnyvnf ycgkdkeynd
      421 latiffntqd dairnlfsak tihefsaksl ltflvmfytl avvtfgtavp agqfvpgimi
      481 gstygrlvgi ftvnhykkln idegtyallg aasflggsmr mtvslcvimv eitnnlkllp
      541 limlvllisk avgdvfnegl ydeqtrlrgi pllesrpkyv mrkmtareac gnqkvlslpr
      601 vvkvadavsi lrsnkhngfp vvdhtrdgep lviglmlrsh llvllqskig fqhsplpshs
      661 rsgsgairhn fsefakpvss kgisiddiyl ssedlemyid lapflnpspy vvpedmsltk
      721 vynlfrqlgl rhifvvpras rvigvitrkd llieeeseds atmelqstsv rgqrhktrll
      781 eengadaerp llngllvqnq r
//
LOCUS       XP_040942628             773 aa            linear   PLN 06-AUG-2024
DEFINITION  chloride channel protein CLC-d isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942628
VERSION     XP_040942628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086694.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..773
                     /product="chloride channel protein CLC-d isoform X2"
                     /calculated_mol_wt=84774
     Region          44..573
                     /region_name="ClC_6_like"
                     /note="ClC-6-like chloride channel proteins. This CD
                     includes ClC-6, ClC-7 and ClC-B, C, D in plants. Proteins
                     in this family are ubiquitous in eukarotes and their
                     functions are unclear. They are expressed in intracellular
                     organelles membranes. This family...; cd03685"
                     /db_xref="CDD:239657"
     Site            order(147..151,189..193,472..476,561)
                     /site_type="active"
                     /note="putative Cl- selectivity filter [active]"
                     /db_xref="CDD:239657"
     Site            191
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239657"
     Site            258
                     /site_type="active"
                     /note="putative H+/Cl- coupling transport residue
                     [active]"
                     /db_xref="CDD:239657"
     Region          576..752
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04591"
                     /db_xref="CDD:341367"
     Site            order(582,594..596,618..620,732,745,747,749..750)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341367"
     Region          582..704
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     Site            order(618,635,639..640,643,710,732..734,749)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341367"
     Region          710..752
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..773
                     /gene="LOC121213712"
                     /coded_by="XM_041086694.1:240..2561"
                     /db_xref="GeneID:121213712"
ORIGIN      
        1 mlsnhfengm dmarlawsrl phsedgeldg vgllstssnr ngvesldyev ienyayreeq
       61 aqrgkffvgy nvavkwffal ligigtglaa vfinisvenf agwkfaltfn iiqksylagf
      121 lmyilinlal vfssvyiith fapaaagsgi peikgylngi dipgillfrt ligkifgsig
      181 svggglalgk egplvhtgac iasllgqggs tkyhlssrwl qffksdrdrr dlvtcgcaag
      241 vaaafrapvg gvlfaleevt swwrsqlmwr vfftsavvav vvrvamgwck sgncghfggg
      301 gfiiwdisdg qedysfeell pmavigiigg llgalfnqlt iyvtrwrrny lhkkgnrvki
      361 yeaclisvlt svisfglpll rncspcpdsd pgseiecpra pgvdgnyvnf ycgkdkeynd
      421 latiffntqd dairnlfsak tihefsaksl ltflvmfytl avvtfgtavp agqfvpgimi
      481 gstygrlvgi ftvnhykkln idegtyallg aasflggsmr mtvslcvimv eitnnlkllp
      541 limlvllisk avgdvfnegl ydeqtrlrgi pllesrpkyv mrkmtareac gnqkvlslpr
      601 vvkvadavsi lrsnkhngfp vvdhtrdgep lviglmlrsh llvllqskig fqhsplpshs
      661 rsgsgairhn fsefakpvss kgisiddiyl ssedlemyid lapflnpspy vvpedmsltk
      721 vynlfrqlgl rhifvvpras rvigvitrkd llieeeseds atmelqstsr sat
//
LOCUS       XP_016720665             366 aa            linear   PLN 06-AUG-2024
DEFINITION  putative methyltransferase C9orf114 homolog isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016720665
VERSION     XP_016720665.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865176.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720665.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..366
                     /product="putative methyltransferase C9orf114 homolog
                     isoform X1"
                     /calculated_mol_wt=40583
     Region          61..353
                     /region_name="Methyltrn_RNA_3"
                     /note="Putative RNA methyltransferase; pfam02598"
                     /db_xref="CDD:460611"
     CDS             1..366
                     /gene="LOC107933031"
                     /coded_by="XM_016865176.2:182..1282"
                     /db_xref="GeneID:107933031"
ORIGIN      
        1 mgkkkdkkrf ereaetnspa etqtdlslln aagdshrkkk pktkpeketn getkkaddip
       61 tvtvaiagsi vdnaqslela trlasqiara atifridevv vfdnksslrn ngafsnqnks
      121 nendrgaafl vrilqyletp qylrkalfak hnslryvgml ppldaphhlr khewapyreg
      181 vtleekptss vgtvvdvgld knvvvdqalg pgkrvtvamg tnqnldydlp rqvvspskpr
      241 edtgtywgyk vryasnissv fsdcpykggy dhligtsehg ivvkssqlnl pafrhlliaf
      301 ggllgleksv eednkfkgkn vrdifnmyln tcphqgsrti rteeallisl qyfqepitra
      361 mqgpvs
//
LOCUS       XP_016720666             307 aa            linear   PLN 06-AUG-2024
DEFINITION  putative methyltransferase C9orf114 homolog isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016720666
VERSION     XP_016720666.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865177.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720666.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..307
                     /product="putative methyltransferase C9orf114 homolog
                     isoform X2"
                     /calculated_mol_wt=33784
     Region          61..294
                     /region_name="Methyltrn_RNA_3"
                     /note="Putative RNA methyltransferase; pfam02598"
                     /db_xref="CDD:460611"
     CDS             1..307
                     /gene="LOC107933031"
                     /coded_by="XM_016865177.2:112..1035"
                     /db_xref="GeneID:107933031"
ORIGIN      
        1 mgkkkdkkrf ereaetnspa etqtdlslln aagdshrkkk pktkpeketn getkkaddip
       61 tvtvaiagsi vdnaqslela trlasqiara atifridegm lppldaphhl rkhewapyre
      121 gvtleekpts svgtvvdvgl dknvvvdqal gpgkrvtvam gtnqnldydl prqvvspskp
      181 redtgtywgy kvryasniss vfsdcpykgg ydhligtseh givvkssqln lpafrhllia
      241 fggllgleks veednkfkgk nvrdifnmyl ntcphqgsrt irteeallis lqyfqepitr
      301 amqgpvs
//
LOCUS       XP_016720672             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein YwkD [Gossypium hirsutum].
ACCESSION   XP_016720672
VERSION     XP_016720672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865183.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein YwkD"
                     /calculated_mol_wt=15786
     Region          9..136
                     /region_name="VOC_like"
                     /note="uncharacterized subfamily of vicinal oxygen chelate
                     (VOC) family; cd07245"
                     /db_xref="CDD:319909"
     Site            order(9..13,15,29..30,32,47,50..51,55,88..95,99..100,103,
                     135..136)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:319909"
     CDS             1..142
                     /gene="LOC107933037"
                     /coded_by="XM_016865183.2:101..529"
                     /db_xref="GeneID:107933037"
ORIGIN      
        1 mavakaacln hisressdir rlanfykeif gfeeiespdf gefkviwlnl pgsfpmhlie
       61 rnpltklpeg pysstaavad psnlprghhi cftvsnfdsf vqslkdkgiq tferslpngk
      121 vrqifffdpd gnglevasre ap
//
LOCUS       XP_016720711             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720711
VERSION     XP_016720711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18170
     Region          <111..140
                     /region_name="IbpA"
                     /note="Small heat shock protein IbpA, HSP20 family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0071"
                     /db_xref="CDD:439841"
     CDS             1..159
                     /gene="LOC107933070"
                     /coded_by="XM_016865222.2:192..671"
                     /db_xref="GeneID:107933070"
ORIGIN      
        1 mrihpspkkr niaiqyemdp rseaerprkk lrrlphlfgr vlelpfrsda dvtveessdr
       61 fkfvaetder igdvvraham eihpgvtriv irsenlvdfc sldhivldmw rfrlpemarp
      121 elasaiyedg elivtvpkge lgggvrngnt nnnrfvlvq
//
LOCUS       XP_016720740             329 aa            linear   PLN 06-AUG-2024
DEFINITION  stress-induced-phosphoprotein 1 [Gossypium hirsutum].
ACCESSION   XP_016720740
VERSION     XP_016720740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865251.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="stress-induced-phosphoprotein 1"
                     /calculated_mol_wt=37315
     Region          18..43
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(19..20,23..24,26,50,53..54,57..58,60..61,84,87..88,
                     91..92,95)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <22..138
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          48..78
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          83..111
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..329
                     /gene="LOC107933098"
                     /coded_by="XM_016865251.2:314..1303"
                     /db_xref="GeneID:107933098"
ORIGIN      
        1 maeaevgsge gkpqemslkd kgneffkagn ylkaaalytq aikqdpsnpt lysnraaafl
       61 nlvklnkala daettitlkp qwekgyfrkg cileameryd dalaafqial qynpqsaevs
      121 rkikrlsqla kdkkraqevq nlrsnvdiak cletlktems ekyksedswk emfsflvetm
      181 etavkswhet skvdprvyfl ldkeksqadk yapvvnidka fesphthssc fsflrqyaed
      241 sfsraaclva pksiiaypqv wkgqgsrkwk hgqhdgffvq fespllrklw fisssnemgk
      301 tlcrdpevld igahevfprl fkeklssss
//
LOCUS       XP_016720741             223 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24beta3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016720741
VERSION     XP_016720741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865252.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="transmembrane emp24 domain-containing protein
                     p24beta3 isoform X1"
                     /calculated_mol_wt=25115
     Region          32..215
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..223
                     /gene="LOC107933099"
                     /coded_by="XM_016865252.2:417..1088"
                     /db_xref="GeneID:107933099"
ORIGIN      
        1 meskwrkiwg ligllllnfv nnvsslslti tkvdcvyeiv rsegdivsgn fvvvdhhifw
       61 ssdhpgidfs itspgggilh nlkgtsgdkf sfkaprsgly qfcfhnplst petiafyihi
      121 ghipnehnla knehldpiiv kiaelreale avtteqkylk ardavhrrnl mirylyldaa
      181 nestktrvig ytvgeyillt iasvlqvvyi rrlfsksvgy nri
//
LOCUS       XP_016720742             212 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24beta3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016720742
VERSION     XP_016720742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865253.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="transmembrane emp24 domain-containing protein
                     p24beta3 isoform X2"
                     /calculated_mol_wt=23778
     Region          32..204
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..212
                     /gene="LOC107933099"
                     /coded_by="XM_016865253.2:245..883"
                     /db_xref="GeneID:107933099"
ORIGIN      
        1 meskwrkiwg ligllllnfv nnvsslslti tkvdcvyeiv rsegdivsgn fvvvdhhifw
       61 ssdhpgidfs itspgggilh nlkgtsgdkf sfkaprsgly qfcfhnplst petiafyihi
      121 ghipnehnla knehldpiiv kiaelreale avtteqkylk ardavhrrtn estktrvigy
      181 tvgeyillti asvlqvvyir rlfsksvgyn ri
//
LOCUS       XP_016720754             251 aa            linear   PLN 06-AUG-2024
DEFINITION  stem-specific protein TSJT1 [Gossypium hirsutum].
ACCESSION   XP_016720754
VERSION     XP_016720754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865265.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="stem-specific protein TSJT1"
                     /calculated_mol_wt=26989
     Region          2..227
                     /region_name="DUF3700"
                     /note="Aluminium induced protein; pfam12481"
                     /db_xref="CDD:403619"
     Site            order(6,61,81..83,106)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238891"
     CDS             1..251
                     /gene="LOC107933114"
                     /coded_by="XM_016865265.2:180..935"
                     /db_xref="GeneID:107933114"
ORIGIN      
        1 mlavfnksva kspdgltvad qsqavsalkd gflanhfgsv hpgsvtinlg ssgvmaysre
       61 kqnpllprlf avvdeifcmf qghienvavl kqqyglnkta degiivieay rtlrdrgpyp
      121 pdqvvrdiqg kfifilfdss skstfiasda dgtvpffwgt dvdghlvlad deetvkkgcg
      181 kssapfpkgc fftssgglrs fehpqnelka vprvdgsgqa cgatycvdte tkkestgmkk
      241 vdsaanwstn y
//
LOCUS       XP_016720750             445 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720750
VERSION     XP_016720750.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865261.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720750.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50753
     Region          144..352
                     /region_name="START_STARD2_7-like"
                     /note="Lipid-binding START domain of mammalian STARD2, -7,
                     and related proteins; cd08870"
                     /db_xref="CDD:176879"
     Site            order(168..169,180,192,194,206,210,216,222,242,244,246,
                     255,257,292,294,296,313,315,317,332..334,338,341..342,345)
                     /site_type="active"
                     /note="PtdCho binding site [active]"
                     /db_xref="CDD:176879"
     CDS             1..445
                     /gene="LOC107933110"
                     /coded_by="XM_016865261.2:108..1445"
                     /db_xref="GeneID:107933110"
ORIGIN      
        1 mdetffdlme llmkqsitet vvdvliyavp iwlavtigla inwswrprwt glvllgfrsk
       61 frfiwtappg fgarrlwlaf talsafsvfr tifsnfikrr fkesasdssv plqsppptaw
      121 ispesvadav spggraeere qdivtendla hllhllegkd gemewqrmme rttsnmsyqa
      181 wrqepvsgpa iyrsrtvfed atpevvrdff wddefrpkwd tmlayfktld ecpctgsmiv
      241 hwirkfpffc sdrdyiigrr iwedgktyyc vtkgvpypgl pkrdkprrve lyfsswiirp
      301 vesrkgdgql sacevtlvhy edmgipkdva klgvrhgmwg avkklhsgmr ayqsarktet
      361 slskcalmar mttkiscden isspgrvlre dendqsmgii krkndnslnw kwiaiagtva
      421 lafglrsgvi gkallvgagq rigrr
//
LOCUS       XP_040942629             386 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium transporter MRS2-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942629
VERSION     XP_040942629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086695.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="magnesium transporter MRS2-2 isoform X1"
                     /calculated_mol_wt=42578
     Region          25..383
                     /region_name="Mrs2_Mfm1p-like"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     cd12823"
                     /db_xref="CDD:213357"
     Site            order(36,66,78,80,82,96..99,100..101,153,156,205..206,209,
                     281)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:213357"
     Site            order(53,56..57,67,69,104,108,144,147,151,155,158..159,
                     162,165..166,168..169,172,184..185,187..188,191..192,
                     195..196,198..199,203,205..206,209..210,213..214,275..276,
                     278..279,282..283,285..286,289..290,292..293,295..297,
                     300..307,309..321,323..325,327..332,334..337,341..344,
                     356..357,360..361,377,380)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:213357"
     CDS             1..386
                     /gene="LOC121203026"
                     /coded_by="XM_041086695.1:223..1383"
                     /db_xref="GeneID:121203026"
ORIGIN      
        1 mthvvpadpq vlvtvkkkaq psrswavlds ngettlldvd kyaimhrvni hardlrildp
       61 llsypstilg rdgaivlnle qhikaiitae evllrdpsge yvvpvvqelq rhlpvvnain
      121 qgpeaigqid veaadecvsp fefraleval esicsflaar tleletaayp aldeltslis
      181 srnldrvrkl ksamtrltar vqkvrdaleq lldddddmad lylsrklaas spvsgsgaan
      241 wyavsptigs kiskasrgsi atihgdendv eelemlleay fmqidgtlnk lttlreyidd
      301 tedyiniqld nhrnqliqle lflssgsvcl svyslvaaif gmnipftwnd nhgyvfkwvv
      361 iisgllsall filimsyarl kglvgs
//
LOCUS       XP_040942630             385 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium transporter MRS2-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942630
VERSION     XP_040942630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086696.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..385
                     /product="magnesium transporter MRS2-2 isoform X2"
                     /calculated_mol_wt=42450
     Region          25..382
                     /region_name="Mrs2_Mfm1p-like"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     cd12823"
                     /db_xref="CDD:213357"
     Site            order(36,66,78,80..81,95..98,99..100,152,155,204..205,208,
                     280)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:213357"
     Site            order(53,56..57,67,69,103,107,143,146,150,154,157..158,
                     161,164..165,167..168,171,183..184,186..187,190..191,
                     194..195,197..198,202,204..205,208..209,212..213,274..275,
                     277..278,281..282,284..285,288..289,291..292,294..296,
                     299..306,308..320,322..324,326..331,333..336,340..343,
                     355..356,359..360,376,379)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:213357"
     CDS             1..385
                     /gene="LOC121203026"
                     /coded_by="XM_041086696.1:218..1375"
                     /db_xref="GeneID:121203026"
ORIGIN      
        1 mthvvpadpq vlvtvkkkaq psrswavlds ngettlldvd kyaimhrvni hardlrildp
       61 llsypstilg rdgaivlnle hikaiitaee vllrdpsgey vvpvvqelqr hlpvvnainq
      121 gpeaigqidv eaadecvspf efralevale sicsflaart leletaaypa ldeltsliss
      181 rnldrvrklk samtrltarv qkvrdaleql ldddddmadl ylsrklaass pvsgsgaanw
      241 yavsptigsk iskasrgsia tihgdendve elemlleayf mqidgtlnkl ttlreyiddt
      301 edyiniqldn hrnqliqlel flssgsvcls vyslvaaifg mnipftwndn hgyvfkwvvi
      361 isgllsallf ilimsyarlk glvgs
//
LOCUS       XP_040942631             359 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium transporter MRS2-2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942631
VERSION     XP_040942631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086697.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="magnesium transporter MRS2-2 isoform X3"
                     /calculated_mol_wt=39796
     Region          25..>293
                     /region_name="Mrs2_Mfm1p-like"
                     /note="Saccharomyces cerevisiae inner mitochondrial
                     membrane Mg2+ transporters Mfm1p and Mrs2p-like family;
                     cd12823"
                     /db_xref="CDD:213357"
     Site            order(36,66,78,80,82,96..99,100..101,153,156,205..206,245,
                     281)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:213357"
     CDS             1..359
                     /gene="LOC121203026"
                     /coded_by="XM_041086697.1:229..1308"
                     /db_xref="GeneID:121203026"
ORIGIN      
        1 mthvvpadpq vlvtvkkkaq psrswavlds ngettlldvd kyaimhrvni hardlrildp
       61 llsypstilg rdgaivlnle qhikaiitae evllrdpsge yvvpvvqelq rhlpvvnain
      121 qgpeaigqid veaadecvsp fefraleval esicsflaar tleletaayp aldeltslis
      181 srnldrvrkl ksamtrltar vqkvrdaleq lldddddmad lylsrklaas spvsgsgaan
      241 wyavsptigs kiskasrgsi atihgdendv eelemlleay fmqidgtlnk lttfsllhsn
      301 yvaagiyrry rglhqysarq spksvnpvra lskfrkcvfi clffggcniw dehsiymer
//
LOCUS       XP_040942632            1129 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1a isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942632
VERSION     XP_040942632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086698.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1129
                     /product="TNF receptor-associated factor homolog 1a
                     isoform X1"
                     /calculated_mol_wt=124830
     Region          68..221
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,192..194)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          637..>905
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <776..>946
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1129
                     /gene="LOC107933083"
                     /coded_by="XM_041086698.1:192..3581"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpglil slnfnldsls ycillldlyg sslysktgws hfaqftiavv nkdpkkskys
      181 dtlhrfwkke hdwgwkkfme lsklydgfie sdtliikaqv qvvrekvdrp frcldrqyrr
      241 elvrvyltnv eqiccrfldd rrnklgslie dkatwssfca fwfgidqstr crmsrektdv
      301 ilkvvvkhff iekevtstlv mdslysglka levqskgnkt ksklldaeem papivrvekd
      361 mfvlvddvlv lleraaalep lppkdekgpq nrskdgnsge yfnkdsidrd errltelgrr
      421 tveifilshi fsnkievayq eavawkrqee lireeaawla eseqkakrga sekekkskkk
      481 qakqkrnnrk skdkgreeka fvaakekhqe dnrdnetdas mmvevqlvpe ksylpddvsd
      541 vseavdcgie alqpdsedrc aspvgwdtdt sevhppteas ssgisslscm qnevadkrsp
      601 stmddssstc stdsvpsvvt ngsykgnlfs nnqnkkspsr gknqlsktss ddgswitetd
      661 nqppspaldg gdcndasess kageseseaa lsssldqttw vdqdalkkev vllqkkpsth
      721 dpvdlerpkg ktvaipsspr nllptakfgs dysiagsvgs vlvrkassnd lrqsdqpass
      781 ktliqmtsip kseiqkaats kpaenpvtpq vpmmsspssa pqisslrpta svvsmvqtta
      841 vlsrsvsaag clgpnttpat syvpqsyrna lgnhvapgss hpnfsssvay sqppasvpap
      901 vyipqssert dpnsvqpgfp fgmvtrdslp napgwiessq rdattsmhsi psslleienl
      961 dlctdfpgct tgrqtqgvfa defphldiin dlldeehnvg rvarsatrfh slgllnrhvs
     1021 spsnlgmlge tvsscgfeqa wsywnngfqq gyrnslgnhc dtsreyipqp splpyanglt
     1081 dgltpthwpm aslgmrnada vnypyygrey snlvcgvngy svfrpsdgl
//
LOCUS       XP_040942633            1107 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1a isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942633
VERSION     XP_040942633.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086699.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1107
                     /product="TNF receptor-associated factor homolog 1a
                     isoform X2"
                     /calculated_mol_wt=122416
     Region          68..221
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,192..194)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          637..>905
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <776..>954
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1107
                     /gene="LOC107933083"
                     /coded_by="XM_041086699.1:191..3514"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpglil slnfnldsls ycillldlyg sslysktgws hfaqftiavv nkdpkkskys
      181 dtlhrfwkke hdwgwkkfme lsklydgfie sdtliikaqv qvvrekvdrp frcldrqyrr
      241 elvrvyltnv eqiccrfldd rrnklgslie dkatwssfca fwfgidqstr crmsrektdv
      301 ilkvvvkhff iekevtstlv mdslysglka levqskgnkt ksklldaeem papivrvekd
      361 mfvlvddvlv lleraaalep lppkdekgpq nrskdgnsge yfnkdsidrd errltelgrr
      421 tveifilshi fsnkievayq eavawkrqee lireeaawla eseqkakrga sekekkskkk
      481 qakqkrnnrk skdkgreeka fvaakekhqe dnrdnetdas mmvevqlvpe ksylpddvsd
      541 vseavdcgie alqpdsedrc aspvgwdtdt sevhppteas ssgisslscm qnevadkrsp
      601 stmddssstc stdsvpsvvt ngsykgnlfs nnqnkkspsr gknqlsktss ddgswitetd
      661 nqppspaldg gdcndasess kageseseaa lsssldqttw vdqdalkkev vllqkkpsth
      721 dpvdlerpkg ktvaipsspr nllptakfgs dysiagsvgs vlvrkassnd lrqsdqpass
      781 ktliqmtsip kseiqkaats kpaenpvtpq vpmmsspssa pqisslrpta svvsmvqtta
      841 vlsrsvsaag clgpnttpat syvpqsyrna lgnhvapgss hpnfsssvay sqppasvpap
      901 vyipqssert dpnsvqpgfp fgmvtrdslp napgwiessq rdattscttg rqtqgvfade
      961 fphldiindl ldeehnvgrv arsatrfhsl gllnrhvssp snlgmlgetv sscgfeqaws
     1021 ywnngfqqgy rnslgnhcdt sreyipqpsp lpyangltdg ltpthwpmas lgmrnadavn
     1081 ypyygreysn lvcgvngysv frpsdgl
//
LOCUS       XP_016720720            1098 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1a isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016720720
VERSION     XP_016720720.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865231.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720720.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1098
                     /product="TNF receptor-associated factor homolog 1a
                     isoform X3"
                     /calculated_mol_wt=121408
     Region          68..190
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,161..163)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          606..>874
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <745..>915
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1098
                     /gene="LOC107933083"
                     /coded_by="XM_016865231.2:256..3552"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpgwsh faqftiavvn kdpkkskysd tlhrfwkkeh dwgwkkfmel sklydgfies
      181 dtliikaqvq vvrekvdrpf rcldrqyrre lvrvyltnve qiccrflddr rnklgslied
      241 katwssfcaf wfgidqstrc rmsrektdvi lkvvvkhffi ekevtstlvm dslysglkal
      301 evqskgnktk sklldaeemp apivrvekdm fvlvddvlvl leraaalepl ppkdekgpqn
      361 rskdgnsgey fnkdsidrde rrltelgrrt veifilshif snkievayqe avawkrqeel
      421 ireeaawlae seqkakrgas ekekkskkkq akqkrnnrks kdkgreekaf vaakekhqed
      481 nrdnetdasm mvevqlvpek sylpddvsdv seavdcgiea lqpdsedrca spvgwdtdts
      541 evhppteass sgisslscmq nevadkrsps tmddssstcs tdsvpsvvtn gsykgnlfsn
      601 nqnkkspsrg knqlsktssd dgswitetdn qppspaldgg dcndasessk ageseseaal
      661 sssldqttwv dqdalkkevv llqkkpsthd pvdlerpkgk tvaipssprn llptakfgsd
      721 ysiagsvgsv lvrkassndl rqsdqpassk tliqmtsipk seiqkaatsk paenpvtpqv
      781 pmmsspssap qisslrptas vvsmvqttav lsrsvsaagc lgpnttpats yvpqsyrnal
      841 gnhvapgssh pnfsssvays qppasvpapv yipqssertd pnsvqpgfpf gmvtrdslpn
      901 apgwiessqr dattsmhsip sslleienld lctdfpgctt grqtqgvfad efphldiind
      961 lldeehnvgr varsatrfhs lgllnrhvss psnlgmlget vsscgfeqaw sywnngfqqg
     1021 yrnslgnhcd tsreyipqps plpyangltd gltpthwpma slgmrnadav nypyygreys
     1081 nlvcgvngys vfrpsdgl
//
LOCUS       XP_040942634            1076 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1a isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040942634
VERSION     XP_040942634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086700.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1076
                     /product="TNF receptor-associated factor homolog 1a
                     isoform X4"
                     /calculated_mol_wt=118994
     Region          68..190
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,161..163)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          606..>874
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <745..>923
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1076
                     /gene="LOC107933083"
                     /coded_by="XM_041086700.1:256..3486"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpgwsh faqftiavvn kdpkkskysd tlhrfwkkeh dwgwkkfmel sklydgfies
      181 dtliikaqvq vvrekvdrpf rcldrqyrre lvrvyltnve qiccrflddr rnklgslied
      241 katwssfcaf wfgidqstrc rmsrektdvi lkvvvkhffi ekevtstlvm dslysglkal
      301 evqskgnktk sklldaeemp apivrvekdm fvlvddvlvl leraaalepl ppkdekgpqn
      361 rskdgnsgey fnkdsidrde rrltelgrrt veifilshif snkievayqe avawkrqeel
      421 ireeaawlae seqkakrgas ekekkskkkq akqkrnnrks kdkgreekaf vaakekhqed
      481 nrdnetdasm mvevqlvpek sylpddvsdv seavdcgiea lqpdsedrca spvgwdtdts
      541 evhppteass sgisslscmq nevadkrsps tmddssstcs tdsvpsvvtn gsykgnlfsn
      601 nqnkkspsrg knqlsktssd dgswitetdn qppspaldgg dcndasessk ageseseaal
      661 sssldqttwv dqdalkkevv llqkkpsthd pvdlerpkgk tvaipssprn llptakfgsd
      721 ysiagsvgsv lvrkassndl rqsdqpassk tliqmtsipk seiqkaatsk paenpvtpqv
      781 pmmsspssap qisslrptas vvsmvqttav lsrsvsaagc lgpnttpats yvpqsyrnal
      841 gnhvapgssh pnfsssvays qppasvpapv yipqssertd pnsvqpgfpf gmvtrdslpn
      901 apgwiessqr dattscttgr qtqgvfadef phldiindll deehnvgrva rsatrfhslg
      961 llnrhvssps nlgmlgetvs scgfeqawsy wnngfqqgyr nslgnhcdts reyipqpspl
     1021 pyangltdgl tpthwpmasl gmrnadavny pyygreysnl vcgvngysvf rpsdgl
//
LOCUS       XP_040942635            1009 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040942635
VERSION     XP_040942635.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086701.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1009
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X5"
                     /calculated_mol_wt=111590
     Region          68..221
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,192..194)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          637..>905
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <776..>946
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1009
                     /gene="LOC107933083"
                     /coded_by="XM_041086701.1:192..3221"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpglil slnfnldsls ycillldlyg sslysktgws hfaqftiavv nkdpkkskys
      181 dtlhrfwkke hdwgwkkfme lsklydgfie sdtliikaqv qvvrekvdrp frcldrqyrr
      241 elvrvyltnv eqiccrfldd rrnklgslie dkatwssfca fwfgidqstr crmsrektdv
      301 ilkvvvkhff iekevtstlv mdslysglka levqskgnkt ksklldaeem papivrvekd
      361 mfvlvddvlv lleraaalep lppkdekgpq nrskdgnsge yfnkdsidrd errltelgrr
      421 tveifilshi fsnkievayq eavawkrqee lireeaawla eseqkakrga sekekkskkk
      481 qakqkrnnrk skdkgreeka fvaakekhqe dnrdnetdas mmvevqlvpe ksylpddvsd
      541 vseavdcgie alqpdsedrc aspvgwdtdt sevhppteas ssgisslscm qnevadkrsp
      601 stmddssstc stdsvpsvvt ngsykgnlfs nnqnkkspsr gknqlsktss ddgswitetd
      661 nqppspaldg gdcndasess kageseseaa lsssldqttw vdqdalkkev vllqkkpsth
      721 dpvdlerpkg ktvaipsspr nllptakfgs dysiagsvgs vlvrkassnd lrqsdqpass
      781 ktliqmtsip kseiqkaats kpaenpvtpq vpmmsspssa pqisslrpta svvsmvqtta
      841 vlsrsvsaag clgpnttpat syvpqsyrna lgnhvapgss hpnfsssvay sqppasvpap
      901 vyipqssert dpnsvqpgfp fgmvtrdslp napgwiessq rdattsmhsi psslleienl
      961 dlctdfpgct tgrqtqgvfa defphldiin dlldeehnvg rvasilmrv
//
LOCUS       XP_040942636             987 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040942636
VERSION     XP_040942636.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086702.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..987
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X6"
                     /calculated_mol_wt=109177
     Region          68..221
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,192..194)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          637..>905
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <776..>954
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..987
                     /gene="LOC107933083"
                     /coded_by="XM_041086702.1:191..3154"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpglil slnfnldsls ycillldlyg sslysktgws hfaqftiavv nkdpkkskys
      181 dtlhrfwkke hdwgwkkfme lsklydgfie sdtliikaqv qvvrekvdrp frcldrqyrr
      241 elvrvyltnv eqiccrfldd rrnklgslie dkatwssfca fwfgidqstr crmsrektdv
      301 ilkvvvkhff iekevtstlv mdslysglka levqskgnkt ksklldaeem papivrvekd
      361 mfvlvddvlv lleraaalep lppkdekgpq nrskdgnsge yfnkdsidrd errltelgrr
      421 tveifilshi fsnkievayq eavawkrqee lireeaawla eseqkakrga sekekkskkk
      481 qakqkrnnrk skdkgreeka fvaakekhqe dnrdnetdas mmvevqlvpe ksylpddvsd
      541 vseavdcgie alqpdsedrc aspvgwdtdt sevhppteas ssgisslscm qnevadkrsp
      601 stmddssstc stdsvpsvvt ngsykgnlfs nnqnkkspsr gknqlsktss ddgswitetd
      661 nqppspaldg gdcndasess kageseseaa lsssldqttw vdqdalkkev vllqkkpsth
      721 dpvdlerpkg ktvaipsspr nllptakfgs dysiagsvgs vlvrkassnd lrqsdqpass
      781 ktliqmtsip kseiqkaats kpaenpvtpq vpmmsspssa pqisslrpta svvsmvqtta
      841 vlsrsvsaag clgpnttpat syvpqsyrna lgnhvapgss hpnfsssvay sqppasvpap
      901 vyipqssert dpnsvqpgfp fgmvtrdslp napgwiessq rdattscttg rqtqgvfade
      961 fphldiindl ldeehnvgrv asilmrv
//
LOCUS       XP_040942637             978 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X7 [Gossypium
            hirsutum].
ACCESSION   XP_040942637
VERSION     XP_040942637.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086703.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..978
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X7"
                     /calculated_mol_wt=108168
     Region          68..190
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,161..163)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          606..>874
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <745..>915
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..978
                     /gene="LOC107933083"
                     /coded_by="XM_041086703.1:256..3192"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpgwsh faqftiavvn kdpkkskysd tlhrfwkkeh dwgwkkfmel sklydgfies
      181 dtliikaqvq vvrekvdrpf rcldrqyrre lvrvyltnve qiccrflddr rnklgslied
      241 katwssfcaf wfgidqstrc rmsrektdvi lkvvvkhffi ekevtstlvm dslysglkal
      301 evqskgnktk sklldaeemp apivrvekdm fvlvddvlvl leraaalepl ppkdekgpqn
      361 rskdgnsgey fnkdsidrde rrltelgrrt veifilshif snkievayqe avawkrqeel
      421 ireeaawlae seqkakrgas ekekkskkkq akqkrnnrks kdkgreekaf vaakekhqed
      481 nrdnetdasm mvevqlvpek sylpddvsdv seavdcgiea lqpdsedrca spvgwdtdts
      541 evhppteass sgisslscmq nevadkrsps tmddssstcs tdsvpsvvtn gsykgnlfsn
      601 nqnkkspsrg knqlsktssd dgswitetdn qppspaldgg dcndasessk ageseseaal
      661 sssldqttwv dqdalkkevv llqkkpsthd pvdlerpkgk tvaipssprn llptakfgsd
      721 ysiagsvgsv lvrkassndl rqsdqpassk tliqmtsipk seiqkaatsk paenpvtpqv
      781 pmmsspssap qisslrptas vvsmvqttav lsrsvsaagc lgpnttpats yvpqsyrnal
      841 gnhvapgssh pnfsssvays qppasvpapv yipqssertd pnsvqpgfpf gmvtrdslpn
      901 apgwiessqr dattsmhsip sslleienld lctdfpgctt grqtqgvfad efphldiind
      961 lldeehnvgr vasilmrv
//
LOCUS       XP_040942638             956 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X8 [Gossypium
            hirsutum].
ACCESSION   XP_040942638
VERSION     XP_040942638.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086704.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..956
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X8"
                     /calculated_mol_wt=105755
     Region          68..190
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(115,161..163)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          606..>874
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <745..>923
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..956
                     /gene="LOC107933083"
                     /coded_by="XM_041086704.1:256..3126"
                     /db_xref="GeneID:107933083"
ORIGIN      
        1 mtgivsegsg gdrsvegisn gqcfqsgeal aewrsseqve ngtpstsppy wdsdddydsg
       61 lkpselygky twkiekfsqi nkrelrsnaf eiggykwyil iypqgcdvcn hlslflcvan
      121 hdkllpgwsh faqftiavvn kdpkkskysd tlhrfwkkeh dwgwkkfmel sklydgfies
      181 dtliikaqvq vvrekvdrpf rcldrqyrre lvrvyltnve qiccrflddr rnklgslied
      241 katwssfcaf wfgidqstrc rmsrektdvi lkvvvkhffi ekevtstlvm dslysglkal
      301 evqskgnktk sklldaeemp apivrvekdm fvlvddvlvl leraaalepl ppkdekgpqn
      361 rskdgnsgey fnkdsidrde rrltelgrrt veifilshif snkievayqe avawkrqeel
      421 ireeaawlae seqkakrgas ekekkskkkq akqkrnnrks kdkgreekaf vaakekhqed
      481 nrdnetdasm mvevqlvpek sylpddvsdv seavdcgiea lqpdsedrca spvgwdtdts
      541 evhppteass sgisslscmq nevadkrsps tmddssstcs tdsvpsvvtn gsykgnlfsn
      601 nqnkkspsrg knqlsktssd dgswitetdn qppspaldgg dcndasessk ageseseaal
      661 sssldqttwv dqdalkkevv llqkkpsthd pvdlerpkgk tvaipssprn llptakfgsd
      721 ysiagsvgsv lvrkassndl rqsdqpassk tliqmtsipk seiqkaatsk paenpvtpqv
      781 pmmsspssap qisslrptas vvsmvqttav lsrsvsaagc lgpnttpats yvpqsyrnal
      841 gnhvapgssh pnfsssvays qppasvpapv yipqssertd pnsvqpgfpf gmvtrdslpn
      901 apgwiessqr dattscttgr qtqgvfadef phldiindll deehnvgrva silmrv
//
LOCUS       XP_016720676             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720676
VERSION     XP_016720676.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865187.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720676.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=17901
     Region          1..144
                     /region_name="HR_lesion"
                     /note="HR-like lesion-inducing; pfam05514"
                     /db_xref="CDD:283229"
     CDS             1..162
                     /gene="LOC107933040"
                     /coded_by="XM_016865187.2:187..675"
                     /db_xref="GeneID:107933040"
ORIGIN      
        1 mgfasfvgrv cfasifilsa wqmfnefgvd ggpagkelap klnlakkhls sqfhvnfpdi
       61 etffltqvrq ivltaiamkg lgailfvfgh gfgafllivy llvstpilhd fynygpdepr
      121 ynillgdflq cvaqcgalif fwgmknsitk rrkkkgpksk ta
//
LOCUS       XP_016720677             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720677
VERSION     XP_016720677.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865188.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720677.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=17163
     Region          1..138
                     /region_name="HR_lesion"
                     /note="HR-like lesion-inducing; pfam05514"
                     /db_xref="CDD:283229"
     CDS             1..156
                     /gene="LOC107933040"
                     /coded_by="XM_016865188.2:203..673"
                     /db_xref="GeneID:107933040"
ORIGIN      
        1 mgfasfvgrv cfasifilsa wqmfnefgvd ggpagkelap klnlakkhls sqfhvnfpdi
       61 evrqivltai amkglgailf vfghgfgafl livyllvstp ilhdfynygp deprynillg
      121 dflqcvaqcg aliffwgmkn sitkrrkkkg pkskta
//
LOCUS       XP_016720678             239 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-CoA delta isomerase 2, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016720678
VERSION     XP_016720678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865189.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="enoyl-CoA delta isomerase 2, peroxisomal"
                     /calculated_mol_wt=26182
     Region          1..233
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(21,22,55,59..63,107,109..111,134..135,138)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(61,111)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(91,99,120..123,136..139,145,147..149,151..152,
                     158..159,161..162,164..165,168,179,182,198,201..202)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..239
                     /gene="LOC107933041"
                     /coded_by="XM_016865189.2:60..779"
                     /db_xref="GeneID:107933041"
ORIGIN      
        1 mctlekrgnl filtltgedq hrfnpdliss lldllsqvka qatsgsvlit laqgkffsyg
       61 fdldwaqaag sergaakrlq dmadlfkpvi atllslpmpt iaaitghava agftlalshd
      121 ylimrkdrgi lwmpevdiav tlpdyinalf kekigdasvr rdlflrglkm kgdeaekrgv
      181 vkaaydgeae vreasvclae nlgkrkwhge vyaeirkgly pqlsailgls rkvyaiarl
//
LOCUS       XP_016720734             239 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-CoA delta isomerase 2, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016720734
VERSION     XP_016720734.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865245.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720734.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="enoyl-CoA delta isomerase 2, peroxisomal"
                     /calculated_mol_wt=26087
     Region          1..239
                     /region_name="PLN02267"
                     /note="enoyl-CoA hydratase/isomerase family protein"
                     /db_xref="CDD:215151"
     Site            order(21,22,55,59..63,107,109..111,134..135,138)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(61,111)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(91,99,120..123,136..139,145,147..149,151..152,
                     158..159,161..162,164..165,168,179,182,198,201..202)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..239
                     /gene="LOC107933094"
                     /coded_by="XM_016865245.2:131..850"
                     /db_xref="GeneID:107933094"
ORIGIN      
        1 mctlekrgnl filtftgedq hrfnpnvigs llsllsqvka eatrgsalit qaqgkffsng
       61 fdldwaqaag seqgaaerlh hmvdlfrpvi aallslpmpt vaaitghaaa ggfalalshd
      121 ylimrkdrgv lymsevdial tipdyfnalf rekigdasvr rdfllrglkm kgdeaekrgv
      181 veaayggeae vkqasvrlae nlgkrkwhge vyaeirkgly pqlsailglt hkaytiarl
//
LOCUS       XP_040942639             207 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional regulator SUPERMAN [Gossypium hirsutum].
ACCESSION   XP_040942639
VERSION     XP_040942639.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086705.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="transcriptional regulator SUPERMAN"
                     /calculated_mol_wt=23067
     Region          53..77
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..207
                     /gene="LOC121213713"
                     /coded_by="XM_041086705.1:193..816"
                     /db_xref="GeneID:121213713"
ORIGIN      
        1 merktaaikd qtscysksnn nvkesspwss cnnqgfgsge dylsgfswpp rsytcsfckr
       61 efrsaqalgg hmnvhrrdra rlrqsppppp kdhhhhhhgq ppfsnlnlnp npnpnpnfsp
      121 pssltlstfp ppspslspak kwlfidplns kpsdsrkgve rdrhsslgsr pilgvkelkd
      181 yvtldleigl vndskqdldl elrlgys
//
LOCUS       XP_016720760             443 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tas [Gossypium hirsutum].
ACCESSION   XP_016720760
VERSION     XP_016720760.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720760.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..443
                     /product="protein tas"
                     /calculated_mol_wt=50172
     Region          100..433
                     /region_name="AKR_Tas-like"
                     /note="Escherichia coli Tas protein and similar proteins;
                     cd19094"
                     /db_xref="CDD:381320"
     Site            order(106..108,113,135,140,173,220,267..268,293,323..329,
                     332,334,345..347,382,399..403,407,411)
                     /site_type="active"
                     /db_xref="CDD:381320"
     Site            order(135,140,173,220)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381320"
     CDS             1..443
                     /gene="LOC107933120"
                     /coded_by="XM_016865271.2:59..1390"
                     /db_xref="GeneID:107933120"
ORIGIN      
        1 mfffhldkve kdtitrchli psemavssst vsasvppflc snttkipsfk vphhtplrly
       61 nakrtqiwvk rscfkstita kvaqqsdlqy rklgdsdlqi seitlgtmtf geqntekeah
      121 emlsyafehg inaldtseay pipmkketsg rtdlyiaswl ksqprdkvil atkvcgyser
      181 saylrdnakv lrvdavnire svekslkrln tdyidllqih wpdryvplfg eyfydsskwr
      241 psipfveqlk alqevidegk vryigvsnet sygvmefvha grveglskiv siqnsysllv
      301 rrfevdliev chpkncnigl lsysplagga lsgkyldins eaakkgrmnl fpgymerynk
      361 siakeatmqy iemakkhgls pvqlalgfvr drpfmtssii gatsveqlke didaflttqr
      421 plppevmedi eaifkrykdp ail
//
LOCUS       XP_016720684             420 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tas [Gossypium hirsutum].
ACCESSION   XP_016720684
VERSION     XP_016720684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..420
                     /product="protein tas"
                     /calculated_mol_wt=47340
     Region          77..410
                     /region_name="AKR_Tas-like"
                     /note="Escherichia coli Tas protein and similar proteins;
                     cd19094"
                     /db_xref="CDD:381320"
     Site            order(83..85,90,112,117,150,197,244..245,270,300..306,309,
                     311,322..324,359,376..380,384,388)
                     /site_type="active"
                     /db_xref="CDD:381320"
     Site            order(112,117,150,197)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381320"
     CDS             1..420
                     /gene="LOC107933046"
                     /coded_by="XM_016865195.2:38..1300"
                     /db_xref="GeneID:107933046"
ORIGIN      
        1 mavssstvsa svppflccnt tkipsfkvpr htplrlcnak rtqiwvkrsc fnstitakva
       61 qqsdlqyrkl gdsdlqisei tlgtmtfgeq ntekegheml syafehgina ldtaehypip
      121 mkketsgrtd lyiaswlksq prdkvilatk vcgysersah lrdnakvlrv davniresve
      181 kslkrlntdy idllqihwpd ryvplfgeyf ydsskwrpsi pfveqlkalq evidegkvry
      241 igvsnetsyg vmefvhagrv eglskivsiq nsysllvrrf evdlvevchp kncnigllsy
      301 splaggalsg kyldinseaa kkgrfnlfpg ymerynksia keatvqyiem akkhglspvq
      361 lalgfvrdrl fmtssiigat svkqlkedid aflttqrplp pevmedieai fkrykdpanl
//
LOCUS       XP_040942640            1035 aa            linear   PLN 06-AUG-2024
DEFINITION  PH, RCC1 and FYVE domains-containing protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942640
VERSION     XP_040942640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086706.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1035
                     /product="PH, RCC1 and FYVE domains-containing protein 1"
                     /calculated_mol_wt=112640
     Region          12..123
                     /region_name="PH_PLC_plant-like"
                     /note="Plant-like Phospholipase C (PLC) pleckstrin
                     homology (PH) domain; cd13365"
                     /db_xref="CDD:270171"
     Site            order(26,28,38,107)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270171"
     Site            order(29,31,35,37,39,54)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270171"
     Region          257..590
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          597..664
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          <804..922
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          849..884
                     /region_name="BRX_N"
                     /note="Transcription factor BRX N-terminal domain;
                     pfam13713"
                     /db_xref="CDD:404581"
     Region          946..1001
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     CDS             1..1035
                     /gene="LOC121213714"
                     /coded_by="XM_041086706.1:773..3880"
                     /db_xref="GeneID:121213714"
ORIGIN      
        1 madlvrygns erdieqaiit lkkgtqllky srkgkpkfra frlspdettl iwlsrgeekn
       61 lklssvtril pgqrtavfrr flrpekeyls fsllynngdr sldlickdka eaevwlaglk
      121 aligqnrnrr aksdlsdlqd gffqngrpfg valdfspsia sssasidlgg sdagserasm
      181 qvrssgadgf risvsstpsc ssvgsggpdd ieslgdvyvw gdvwadgsdg tvsavspkid
      241 vltpkplesn vvldvhqiac gvrhialvtk qgevftwgee sggrlghgie kdfsrprlve
      301 flavtnvefv asgeyhtcvv stagdlftwg dgthnarllg hgtdvshwip krvsgalegl
      361 qvlsiacgtw hsalatsngk lftfgdgtfg vlghgdresa aypkevqlln glktikvacg
      421 vwhtaaivev sgqsganiss rklftwgdgd khrlghgnke tyllptcvss lidynfhqla
      481 cghtitvalt ssghvftmgg taygqlgnpg sdgklpclvq eklvgefvee iscgayhvav
      541 ltsrsevftw grgangrlgh gdiedrrtpt lieslkdrhv kniscgsnft scicihkwvs
      601 gadqsvcsgc rqafgftrkr hncyncglvh chacsskkal kaalaptpgk phrvcdacyi
      661 klksaevgna snlnrksagp rpsidgrerl drgeirssrl llspntelvk yleimtgkpg
      721 trfdaasqmr gsqvpstlql rdvglpstfv afqnafkpat ppatppaqsp insrssspys
      781 rrpspprsst ntfsknvies lrksnellnq evsklqnqlk slkqkcgtqd teilklrkna
      841 qehasyaake sskfkeakev vksitdqlke iieklpsevs esetlkaint qaeaflkthg
      901 tneasmessn dqrmeysvdt tavpsnysse nesrsseasa vrggvekeit eqfepgvyit
      961 yvnhrnggki frrvrfskrr fdetqaeeww sknkdrvlkr ysphatksas stassltqpp
     1021 pppvvdette aappp
//
LOCUS       XP_040942641             134 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L14-1 [Gossypium hirsutum].
ACCESSION   XP_040942641
VERSION     XP_040942641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086707.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="60S ribosomal protein L14-1"
                     /calculated_mol_wt=15331
     Region          3..126
                     /region_name="PTZ00065"
                     /note="60S ribosomal protein L14; Provisional"
                     /db_xref="CDD:240252"
     CDS             1..134
                     /gene="LOC121213715"
                     /coded_by="XM_041086707.1:139..543"
                     /db_xref="GeneID:121213715"
ORIGIN      
        1 mpfkryveig rvalvnygkd ygklvvivdv vdqnralvda pdmvrgqmnf krltltditi
       61 diprvpkkkt lieamekadv knkwessswg rklivqkrra slndfdrfkl mlakikrsgv
      121 ikqelaklkk enas
//
LOCUS       XP_040942642             873 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942642
VERSION     XP_040942642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086708.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..873
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=98862
     Region          1..414
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
     Region          574..846
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..873
                     /gene="LOC121213716"
                     /coded_by="XM_041086708.1:167..2788"
                     /db_xref="GeneID:121213716"
ORIGIN      
        1 mevavigggi kglvsayvlv kagvdvvvye keeqlggyak tvnfdaldld lgflfldpar
       61 yatllnmfds lgvdvetsdv sfsishdkgn ngyewcsqyg fsnyfaqkkk llnpfnwqsl
      121 reiikfgndv esylgslenn pdidrtetlg qfinskgyse nfqntylapi cgsmwssske
      181 dvmsfsafsi lsfcrthhly qlfgqpqwlt ikghshfvkr vrevletkgc qfklgcevqs
      241 vlpvdndttm vcgdgfqety ngcimavdap talnllgnqa tfeetrvlga fqyatsdifl
      301 hqdstlmpqn ksawsalnfl nssknnaflt ywlnalqnig ktsepffvtv npdhtpkntl
      361 lkwstghaip svaaskalle lgqiqgkrgi wfcgydfnqd elkagmdaah gilgkhssvl
      421 hspknlspsl pknmspsfme ttarlfvtkf fqqyismgcv ifleeggrif tfkgnmekcp
      481 lktvlkvhnp qfywrimkea digladayih gdfsfldend gllnlfrilv ankensaasg
      541 snkrrtwwsp alltasissa kyfvkhllrq ntitqarrni srhydlsnel fslylgkmmq
      601 yssgvfrtge ehldvaqrrk issliektri ekwhevldig cgwgslaiet vkrtgckytg
      661 itlseqqlky aqekvkeagl ednikillcd yrqlpkehqf driisvemve hvgeeyieef
      721 yrccdqllke dglfvlqfis ipeelskeiq qtagflkeyi fpggtllsld rnlsamaaat
      781 rfsvehveni gmsyyhtlrw wrklflents kvlalgfdek fmrtweyyfd ycaagfktgt
      841 lidyqvvfsr agnfgtlgdp ykgfrsaysf mdd
//
LOCUS       XP_040942643             483 aa            linear   PLN 06-AUG-2024
DEFINITION  tuberculostearic acid methyltransferase UfaA1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942643
VERSION     XP_040942643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086709.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="tuberculostearic acid methyltransferase UfaA1
                     isoform X2"
                     /calculated_mol_wt=55442
     Region          184..456
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..483
                     /gene="LOC121213716"
                     /coded_by="XM_041086709.1:38..1489"
                     /db_xref="GeneID:121213716"
ORIGIN      
        1 mlpgydfnqd elkagmdaah gilgkhssvl hspknlspsl pknmspsfme ttarlfvtkf
       61 fqqyismgcv ifleeggrif tfkgnmekcp lktvlkvhnp qfywrimkea digladayih
      121 gdfsfldend gllnlfrilv ankensaasg snkrrtwwsp alltasissa kyfvkhllrq
      181 ntitqarrni srhydlsnel fslylgkmmq yssgvfrtge ehldvaqrrk issliektri
      241 ekwhevldig cgwgslaiet vkrtgckytg itlseqqlky aqekvkeagl ednikillcd
      301 yrqlpkehqf driisvemve hvgeeyieef yrccdqllke dglfvlqfis ipeelskeiq
      361 qtagflkeyi fpggtllsld rnlsamaaat rfsvehveni gmsyyhtlrw wrklflents
      421 kvlalgfdek fmrtweyyfd ycaagfktgt lidyqvvfsr agnfgtlgdp ykgfrsaysf
      481 mdd
//
LOCUS       XP_016720697            1039 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-13 homolog [Gossypium hirsutum].
ACCESSION   XP_016720697
VERSION     XP_016720697.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720697.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1039
                     /product="protein unc-13 homolog"
                     /calculated_mol_wt=116012
     CDS             1..1039
                     /gene="LOC107933057"
                     /coded_by="XM_016865208.2:144..3263"
                     /db_xref="GeneID:107933057"
ORIGIN      
        1 mgrqshreyf sghvhgasta isttststsi sddnnntdlv wpfgkledld hddireaaye
       61 ifftacrssp gfggrnalsf yssqdhhgng dggsmhgsgg rvsavvtmtp tskvkkalgl
      121 rmlkrspsrr msmssvnggg stpsvspish hghsnsvsfy ssggfstvat rprrpltsae
      181 imrqqmrvte qsdnrlrktl mrtlvgqmgr rsetiilple llrqlkpsef ndmsdyhfwq
      241 rrqlkileag llnhpsiple ksnslakrlr eiiraskskp idtgknsdtm rtlcncvvsl
      301 swrsanetss dachwadgfp lnthiyisll qaifdirdet lvldevdell elmkktwstl
      361 ginrsihnvc ftwvlfqqyv atnqmepdll caaynmltev aidakkidre aayvkllmsm
      421 lvsmqkwaem rllhyheyfn kttvggvenl lplalssmki lgedvtikeg egskkgdtmf
      481 vdstsdcvdh yirsslknaf akiianenlk naevgeraev seallqlake tedlavrere
      541 lfspilkrwh ptaagvaavt lhqcygavlk qylagtsiln seivevlqra aklekvlvqm
      601 vvedseeced ggkgivremm pyevdsiimk llrqwlderl nqakellcrv ketetwnpks
      661 ksepyaqsvv elmsiakemv ngffeipigi tddsvldlae gleqliqeyt tfvascgskq
      721 sylpslpplt rcngdskffk lwrkanpctt rvaeitqfmk tegqhphpst srgtqrlyir
      781 inslhylash lhsldktlsl sprvstrnrf smhlgvgcts ssyfehvnas iqaacdhvse
      841 vaayrlifld scpvfyetly vgdvansrlr pairilkqnl alltailtdh aqalamkevm
      901 kasfeaflmv llaggpsrtf qrsdhemied dfdslkrvfc tcgegllsed ivqreaevve
      961 gvislmgqtt eqltedfsiv tceasgigsi sggqklpmpp ttarwnradp ntilrvlchr
     1021 ndraannflk ksfqlakrn
//
LOCUS       XP_016720691             194 aa            linear   PLN 06-AUG-2024
DEFINITION  CRIB domain-containing protein RIC7 [Gossypium hirsutum].
ACCESSION   XP_016720691
VERSION     XP_016720691.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865202.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="CRIB domain-containing protein RIC7"
                     /calculated_mol_wt=20834
     Region          23..57
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(25,28,31,33,36,49,53)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..194
                     /gene="LOC107933054"
                     /coded_by="XM_016865202.2:647..1231"
                     /db_xref="GeneID:107933054"
ORIGIN      
        1 mkgllkglry isdifeqeke qemqignptd vkhvahigmd gpsankpswm nefnsaeels
       61 sdtlannlqe tpsaagdhes lpptsnekpk ktrrkasien gtavesskvs ekgsrghrss
      121 nnsmgspare sssqgrrhsn rsingsesps qdlpdipkks rrkkskessg gsdgssissr
      181 tkegslpdvt eles
//
LOCUS       XP_040942644             194 aa            linear   PLN 06-AUG-2024
DEFINITION  CRIB domain-containing protein RIC7 [Gossypium hirsutum].
ACCESSION   XP_040942644
VERSION     XP_040942644.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086710.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="CRIB domain-containing protein RIC7"
                     /calculated_mol_wt=20834
     Region          23..57
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(25,28,31,33,36,49,53)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..194
                     /gene="LOC107933054"
                     /coded_by="XM_041086710.1:643..1227"
                     /db_xref="GeneID:107933054"
ORIGIN      
        1 mkgllkglry isdifeqeke qemqignptd vkhvahigmd gpsankpswm nefnsaeels
       61 sdtlannlqe tpsaagdhes lpptsnekpk ktrrkasien gtavesskvs ekgsrghrss
      121 nnsmgspare sssqgrrhsn rsingsesps qdlpdipkks rrkkskessg gsdgssissr
      181 tkegslpdvt eles
//
LOCUS       XP_016720692             194 aa            linear   PLN 06-AUG-2024
DEFINITION  CRIB domain-containing protein RIC7 [Gossypium hirsutum].
ACCESSION   XP_016720692
VERSION     XP_016720692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="CRIB domain-containing protein RIC7"
                     /calculated_mol_wt=20834
     Region          23..57
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(25,28,31,33,36,49,53)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..194
                     /gene="LOC107933054"
                     /coded_by="XM_016865203.2:632..1216"
                     /db_xref="GeneID:107933054"
ORIGIN      
        1 mkgllkglry isdifeqeke qemqignptd vkhvahigmd gpsankpswm nefnsaeels
       61 sdtlannlqe tpsaagdhes lpptsnekpk ktrrkasien gtavesskvs ekgsrghrss
      121 nnsmgspare sssqgrrhsn rsingsesps qdlpdipkks rrkkskessg gsdgssissr
      181 tkegslpdvt eles
//
LOCUS       XP_016720694             194 aa            linear   PLN 06-AUG-2024
DEFINITION  CRIB domain-containing protein RIC7 [Gossypium hirsutum].
ACCESSION   XP_016720694
VERSION     XP_016720694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="CRIB domain-containing protein RIC7"
                     /calculated_mol_wt=20834
     Region          23..57
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(25,28,31,33,36,49,53)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..194
                     /gene="LOC107933054"
                     /coded_by="XM_016865205.2:627..1211"
                     /db_xref="GeneID:107933054"
ORIGIN      
        1 mkgllkglry isdifeqeke qemqignptd vkhvahigmd gpsankpswm nefnsaeels
       61 sdtlannlqe tpsaagdhes lpptsnekpk ktrrkasien gtavesskvs ekgsrghrss
      121 nnsmgspare sssqgrrhsn rsingsesps qdlpdipkks rrkkskessg gsdgssissr
      181 tkegslpdvt eles
//
LOCUS       XP_040942645             194 aa            linear   PLN 06-AUG-2024
DEFINITION  CRIB domain-containing protein RIC7 [Gossypium hirsutum].
ACCESSION   XP_040942645
VERSION     XP_040942645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086711.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="CRIB domain-containing protein RIC7"
                     /calculated_mol_wt=20834
     Region          23..57
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(25,28,31,33,36,49,53)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..194
                     /gene="LOC107933054"
                     /coded_by="XM_041086711.1:629..1213"
                     /db_xref="GeneID:107933054"
ORIGIN      
        1 mkgllkglry isdifeqeke qemqignptd vkhvahigmd gpsankpswm nefnsaeels
       61 sdtlannlqe tpsaagdhes lpptsnekpk ktrrkasien gtavesskvs ekgsrghrss
      121 nnsmgspare sssqgrrhsn rsingsesps qdlpdipkks rrkkskessg gsdgssissr
      181 tkegslpdvt eles
//
LOCUS       XP_040942646             289 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942646
VERSION     XP_040942646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086712.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..289
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32572
     Region          116..251
                     /region_name="DUF716"
                     /note="Family of unknown function (DUF716); pfam04819"
                     /db_xref="CDD:461443"
     CDS             1..289
                     /gene="LOC121213717"
                     /coded_by="XM_041086712.1:163..1032"
                     /db_xref="GeneID:121213717"
ORIGIN      
        1 maslethlla slfftpigir rflcssshfl knpslfkskp wyfsnpkwkn ldlyilaval
       61 phasfaeifi fsslsghsty rfsffqqfss lslfwiliif lvlydsldhl lfneififvy
      121 aciaflveyy figvgitglg tivynllaql tllcagcclv lsvkrtaffa efllcfglvf
      181 kgtwllqtgl clytdafvfk gckkmevlpr spnadvhcel eddsmrgval vnllfsvhgi
      241 limiigfvgf gilssfknlr cedtsgplla qlestdnllm rpvheleme
//
LOCUS       XP_016724248             126 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PROTON GRADIENT REGULATION 5, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016724248
VERSION     XP_016724248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868759.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..126
                     /product="protein PROTON GRADIENT REGULATION 5,
                     chloroplastic"
                     /calculated_mol_wt=13359
     CDS             1..126
                     /gene="LOC107936101"
                     /coded_by="XM_016868759.2:186..566"
                     /db_xref="GeneID:107936101"
ORIGIN      
        1 mvvsisatgf ksglgtpfyg swgsssssds dslvnsvpsq vrvgkpvrsk pvmknvnegk
       61 glfaplvvlt rqiigkkrfn qlrgkaialh sqvitefcks igadakqrqg lirlakknge
      121 rlgfla
//
LOCUS       XP_016724250             126 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PROTON GRADIENT REGULATION 5, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016724250
VERSION     XP_016724250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868761.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..126
                     /product="protein PROTON GRADIENT REGULATION 5,
                     chloroplastic"
                     /calculated_mol_wt=13359
     CDS             1..126
                     /gene="LOC107936101"
                     /coded_by="XM_016868761.2:186..566"
                     /db_xref="GeneID:107936101"
ORIGIN      
        1 mvvsisatgf ksglgtpfyg swgsssssds dslvnsvpsq vrvgkpvrsk pvmknvnegk
       61 glfaplvvlt rqiigkkrfn qlrgkaialh sqvitefcks igadakqrqg lirlakknge
      121 rlgfla
//
LOCUS       XP_016724249             126 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PROTON GRADIENT REGULATION 5, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016724249
VERSION     XP_016724249.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868760.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..126
                     /product="protein PROTON GRADIENT REGULATION 5,
                     chloroplastic"
                     /calculated_mol_wt=13359
     CDS             1..126
                     /gene="LOC107936101"
                     /coded_by="XM_016868760.2:186..566"
                     /db_xref="GeneID:107936101"
ORIGIN      
        1 mvvsisatgf ksglgtpfyg swgsssssds dslvnsvpsq vrvgkpvrsk pvmknvnegk
       61 glfaplvvlt rqiigkkrfn qlrgkaialh sqvitefcks igadakqrqg lirlakknge
      121 rlgfla
//
LOCUS       XP_016724304             523 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 19 homolog 1 [Gossypium hirsutum].
ACCESSION   XP_016724304
VERSION     XP_016724304.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868815.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724304.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..523
                     /product="pre-mRNA-processing factor 19 homolog 1"
                     /calculated_mol_wt=56372
     Region          1..54
                     /region_name="RING-Ubox_PRP19"
                     /note="U-box domain, a modified RING finger, found in
                     pre-mRNA-processing factor 19 (Prp19) and similar
                     proteins; cd16656"
                     /db_xref="CDD:438318"
     Site            order(1,13,15,19..20,22,51..54)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438318"
     Region          67..131
                     /region_name="Prp19"
                     /note="Prp19/Pso4-like; pfam08606"
                     /db_xref="CDD:400774"
     Region          225..512
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          226..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(240,244,250..251,263..264,282,286,292..293,308..309,
                     326,331,337..338,351,370,375,381..382,394..395,413,417,
                     422..423,437..438,455,460,464..465,483..484,502,506,512)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          269..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          313..348
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..393
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          399..434
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          442..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          488..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..523
                     /gene="LOC107936145"
                     /coded_by="XM_016868815.2:232..1803"
                     /db_xref="GeneID:107936145"
ORIGIN      
        1 mncsisgevp eepvvskksg llyekrlier hiadygkcpv tgdpltmddi vpvktgkivk
       61 pksltaasip gmlgmfqnew dalmlsnfal eqqlhtarqe lshalyqhda acrviarlkk
      121 erdearslla qaerqaplpa saatanvsal sngkrvsedg dmgpgskqmr pgvsesiiae
      181 ltecnaalsq qrkkhqippt lapvdalery tqlsshplhk tnkpgissid inlskdivat
      241 ggidssavlf dqtsgvmlst lsghskkvts vkfvapsnvi lsgsadktvr iwqgsedgnc
      301 dcrhilkdht aevqaitvha tnnyfvtasl dstwcfydls sglcltqved psnlmgytsa
      361 afhpdglilg tgtteatvri wdvksqgnva nfdghtgsit aisfsengyf lataahdgvk
      421 lwdlrklknf rsfelydqdt ptnsvdfdhs gsylaiagsd vrvyqvgsvk aewnciktlp
      481 dlsgtgratc vkfgsdakyl avgsmdrnlr ifglpegdas mes
//
LOCUS       XP_016724236             487 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like cytosolic serine/threonine-protein kinase RBK2
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724236
VERSION     XP_016724236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868747.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..487
                     /product="receptor-like cytosolic serine/threonine-protein
                     kinase RBK2 isoform X1"
                     /calculated_mol_wt=54623
     Region          201..462
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(201..204,207,209,221,223,253,268..271,318,322..323,
                     325,335..336)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..487
                     /gene="LOC107936095"
                     /coded_by="XM_016868747.2:278..1741"
                     /db_xref="GeneID:107936095"
ORIGIN      
        1 mentqhfsph sceqsidnks snktvnekfk kpflnigrrh ragffdkish ldlkeslgad
       61 keravdepsp tddtledcst seeesidssm asvaiesaes epvpyastss adfenqrhsn
      121 tsihwrdffr trkkrqgvss qglpikpklt rrkkkrikgd vvpqisssld aelscfkssw
      181 knfslselre atdnfsrenl igeggyaevy kgrlkdgkfv aikrltrgsp eemtvdflse
      241 lgivvhvdhp niaqligygv dggmhlvlql sphgslasll ygskeklnwc irfkialgaa
      301 eglcylhegc qrriihkdik panillsedf daqisdfgls kwlpnqwthh ivskvegtfg
      361 ylppefflhg ivnektdvfa fgvvllelvt grqaldnsqk slimwanpli renkieqlid
      421 pslrddydsd qlnrvlvlas icicpseadr prmsqvvdil kgnnscqetl kqleegdtce
      481 dlleedp
//
LOCUS       XP_016724237             483 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like cytosolic serine/threonine-protein kinase RBK2
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724237
VERSION     XP_016724237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="receptor-like cytosolic serine/threonine-protein
                     kinase RBK2 isoform X2"
                     /calculated_mol_wt=54153
     Region          198..458
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(198..200,203,205,217,219,249,264..267,314,318..319,
                     321,331..332)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..483
                     /gene="LOC107936095"
                     /coded_by="XM_016868748.2:135..1586"
                     /db_xref="GeneID:107936095"
ORIGIN      
        1 mentqhfsph sceqsidnks snktvnekfk kpflnigrrh ragffdkish ldlkeslgad
       61 keravdepsp tddtledcst seeesidssm asvaiesaes epvpyastss adfenqrhsn
      121 tsihwrdffr trkkrqgvss qglpikpklt rrkkkrikgd vvpqisssld aelscfkssw
      181 knfslselre atdnfsrgeg gyaevykgrl kdgkfvaikr ltrgspeemt vdflselgiv
      241 vhvdhpniaq ligygvdggm hlvlqlsphg slasllygsk eklnwcirfk ialgaaeglc
      301 ylhegcqrri ihkdikpani llsedfdaqi sdfglskwlp nqwthhivsk vegtfgylpp
      361 efflhgivne ktdvfafgvv llelvtgrqa ldnsqkslim wanplirenk ieqlidpslr
      421 ddydsdqlnr vlvlasicic pseadrprms qvvdilkgnn scqetlkqle egdtcedlle
      481 edp
//
LOCUS       XP_016724290             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724290
VERSION     XP_016724290.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868801.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724290.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46010
     Region          214..262
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     CDS             1..423
                     /gene="LOC107936132"
                     /coded_by="XM_016868801.2:384..1655"
                     /db_xref="GeneID:107936132"
ORIGIN      
        1 mqateavsng vsngssqans pvpepldnkp prpetsgrhs dlslqipprp igfgshsgkg
       61 llqsqgsgrs gsspvgflrg lsfkkkgiia dgersflltp dnktgpesps masfpspsfw
      121 qrctslpvtp asnlspsvat patermager sklnkgakla vvsrslsvpg rnvvivrsas
      181 fdtrkehapt ensddinpvt aesddeeipe eeavcricfd ecderntlkm ecsckgalql
      241 vhevcaikwf svkgnkycdv cgqevrnlpv tllrvpttar rsnrqnidpq rlpsetvsvw
      301 qdfvvlvlis ticyfffleq lliremktqa vviaapfaft lgllgsifal flaikeyiwt
      361 yaafefalva vivhvfytvv hmkavfsill sgmisfgtam alnslyircf gwrvqvagns
      421 npv
//
LOCUS       XP_040942647             517 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase PBL27 [Gossypium hirsutum].
ACCESSION   XP_040942647
VERSION     XP_040942647.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086713.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..517
                     /product="serine/threonine-protein kinase PBL27"
                     /calculated_mol_wt=56657
     Region          99..368
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(99..103,107,120,122,151,167..170,174,176,220,222,
                     224..225,227,238,241,259..262)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(99..103,107,120,122,151,167..170,174,220,222,
                     224..225,227,238)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(103,174,176,220,222,224,241,259..262)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(237..244,255..262)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..517
                     /gene="LOC121213718"
                     /coded_by="XM_041086713.1:570..2123"
                     /db_xref="GeneID:121213718"
ORIGIN      
        1 mggggcfpcf gssnkeksnn ggksikelnn kdstkdgsvg qshhvnrasl dksksrsgsd
       61 skkepavskn gstenipaqt ftfrelaaat knfrpecllg eggfghvykg rlestgqvva
      121 vkqldrnglq gnreflvevl mlsllhhpnl vnligycadg dqrllvyefm plgsledhlh
      181 dlppdkepld wntrmkiaag aakgleylhd kasppviyrd lkssnillde gyhpklsdfg
      241 laklgpvgdk thvstrvmgt ygycapeyam tgqltlksdv ysfgvvflel itgrkaidnm
      301 rapgeqnlva warplfkdrr kfpkmadpll qgrypmrgly qalavaamcl qeqaatrpli
      361 gdvvtaltyl asqtydpnap gnqsnrvgps nprlkddrnm adgldspegr gwhhgspsth
      421 rnspdyrkrn qmresstgse lirndagggs grkcgsddse rqesnrgspl nasraretph
      481 nrvldrerav aeakvwgenw rerkranamg sfdgtne
//
LOCUS       XP_040942648             468 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 34 [Gossypium hirsutum].
ACCESSION   XP_040942648
VERSION     XP_040942648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086714.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="zinc finger CCCH domain-containing protein 34"
                     /calculated_mol_wt=49479
     Region          42..68
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          89..114
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          134..159
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          291..317
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          337..363
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     CDS             1..468
                     /gene="LOC121213719"
                     /coded_by="XM_041086714.1:321..1727"
                     /db_xref="GeneID:121213719"
ORIGIN      
        1 merdpesdpq pewntqgpet gleepvcrlg leggsesype rpdeadciyy lrtgfcgygs
       61 kcrfnhprdr agvmgvgrgg vgeypervgq pvcqyymrtg ackfgascky hhpkqgggsv
      121 ssvplnyygy plrpgekecs yyvktgqckf gttckfhhpa ppamqvpaps papqvapapt
      181 pmpaptmyst vqspsgpssq qygvvmarpp lmpgsyvqgp ygplllsqgv pswnpypgpv
      241 gygtqptvps sstfgatpls psataytgsh qfvpssfesn iqeevsfper pgqpecqyym
      301 ktgrckygss cryhhppevf apkadvvlsp lglplrpgap pcthytqrgm ckfgaacrfd
      361 hpmgtlsysp sassladmpv apypvgttig tlapssssse lrpellsgss kdpapamiss
      421 svsassepvg svfsegapvp hsttqqssws sapstgggsd ddephsss
//
LOCUS       XP_016724227             379 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF15, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016724227
VERSION     XP_016724227.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868738.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..379
                     /product="transcription termination factor MTERF15,
                     mitochondrial"
                     /calculated_mol_wt=43640
     Region          83..354
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..379
                     /gene="LOC107936087"
                     /coded_by="XM_016868738.2:171..1310"
                     /db_xref="GeneID:107936087"
ORIGIN      
        1 miysifrtsl lhgrqamass qnfnlsitki sttlrffsis snehsftvsy linkcgfspe
       61 sasrtsnyvh fetpekpdsl iifldnhgfs ktqiknlikr qpkllysdte ktllpklefl
      121 ysigfsmpel akllsdyppl lraslekrii psfnllrnlf qsddkaiksi krfagilvsd
      181 feknllpnmn ilrgigvpes nillqlhrkp rtlmfnpvrl eeiveevkrm gidtsrkkfl
      241 dvvfamksmt kstlekkidv ykrwgwsdqe iheafrrypl cmtvsedkim aimdflvnkm
      301 gysstlvakq ssvlsrslek rivpralfaq elsskglvnd fklsvlfdts ektfnkmfgd
      361 yfvkkapell klykenvek
//
LOCUS       XP_040942649             188 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF15, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040942649
VERSION     XP_040942649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086715.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="transcription termination factor MTERF15,
                     mitochondrial"
                     /calculated_mol_wt=21140
     Region          <2..166
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..188
                     /gene="LOC121203361"
                     /coded_by="XM_041086715.1:211..777"
                     /db_xref="GeneID:121203361"
ORIGIN      
        1 mnvlrgvgvp esnilmllny kartllckpv rlkeiveevk gmgidssttk flaavialts
       61 mskstlekkf dvyrrwgwsd qeireafqry pscvtasegk imaimdflvt kmgyhsnlva
      121 kqpsifsqsl ekrivpralf arellslglv snltlsalfd tsekvfvnrf vniapellil
      181 yeekkksv
//
LOCUS       XP_040942650             317 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942650
VERSION     XP_040942650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086716.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36114
     Region          88..>300
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..317
                     /gene="LOC121213720"
                     /coded_by="XM_041086716.1:29..982"
                     /db_xref="GeneID:121213720"
ORIGIN      
        1 mfyfifrtsf lhgkqtiaas qssnlfifkr siglrlfsns snghsftvfk lwiplrigfs
       61 ecgfsselas rvsncvhiet pekpdslivf lenhgfsqiq ivnlikrqpt lllsdtektl
      121 spkleflysi gfsrpelakl lssnplllks slkkqiipsf nllrnlfqsn dktikaikrf
      181 dgilvyhayv fsdmkvlrgi gvpesnilmm fsnppallcn pvrlkeived vkrmgfdslt
      241 kkfvhvvial ssmskstlek kfdvyrrwgw sdqeireafq rypscitase dkimaimdfl
      301 vnkmgyrsnl vakqpsi
//
LOCUS       XP_016724265             389 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF8, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016724265
VERSION     XP_016724265.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868776.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="transcription termination factor MTERF8,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=45141
     Region          81..354
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..389
                     /gene="LOC107936114"
                     /coded_by="XM_016868776.2:203..1372"
                     /db_xref="GeneID:107936114"
ORIGIN      
        1 mfyfmfrtsf lhgkqtiaas qssnlvifkr siglrlfsns snghsftvsy ltrkcgfspe
       61 lasrvsnfvr fetpekpdsl ivflenhgfs rtqivnlikr rptlllsdte ktllpklefl
      121 ysigfsrlel akllsdyptl lrfslekrii psfnllrnlf qsddkaiksi kryagilvsd
      181 feksllpnmn ilrgigvpes nillqlhrkp rtlmfnpvrl eeiveevkrm gidssrkkfl
      241 vavyafrsms kstlekkidv yrrwgwsdqa ineafrrypm cmtvsedkim stmdflvnkm
      301 gysltriakq psfltrslek rimpralfar elisqglvne fklsvlfdas ekvfirmyid
      361 rfvnkapell klyreklkis gkkhrsela
//
LOCUS       XP_016724266             212 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF15, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016724266
VERSION     XP_016724266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="transcription termination factor MTERF15,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=25148
     Region          <71..177
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..212
                     /gene="LOC107936114"
                     /coded_by="XM_016868777.2:92..730"
                     /db_xref="GeneID:107936114"
ORIGIN      
        1 mfyrrwhras vhsfsarksd sifrakqelh rkprtlmfnp vrleeiveev krmgidssrk
       61 kflvavyafr smskstlekk idvyrrwgws dqaineafrr ypmcmtvsed kimstmdflv
      121 nkmgysltri akqpsfltrs lekrimpral farelisqgl vnefklsvlf dasekvfirm
      181 yidrfvnkap ellklyrekl kisgkkhrse la
//
LOCUS       XP_016724271             386 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724271
VERSION     XP_016724271.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868782.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724271.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44084
     Region          81..>296
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..386
                     /gene="LOC107936118"
                     /coded_by="XM_016868782.2:150..1310"
                     /db_xref="GeneID:107936118"
ORIGIN      
        1 mfyfiirtsf vhgrqtiaas qssnllifeg siglrlfsns snghsftvsy linkcgfspe
       61 lasrvsksvh fetpekpdsl ivflenhgfs qtqivnlikr qptlllshte ktllpklefl
      121 ysvgfsrlel akllssyphl lkyslkkqii psfnllrdlf qsddktikai krfagilayd
      181 fesylypnmn vlrgigvpes nilmllnrhp riflynpvll keiveevkgm ginssrkkfl
      241 aavhaltsms kstlekkfdv yrrwgwsdqe iheafqryps citasedkim aimdflvnkm
      301 gynstliakq ssvlsrslrv ivpralfaqe llsqglvndl klsvlfdtse kvfirmfvdr
      361 fvnkapdllk lykeklkise kklevs
//
LOCUS       XP_016724268             386 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724268
VERSION     XP_016724268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44263
     Region          81..>296
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..386
                     /gene="LOC107936116"
                     /coded_by="XM_016868779.2:169..1329"
                     /db_xref="GeneID:107936116"
ORIGIN      
        1 mfyfiirtsf vhgrqtiaas qssnlfifkr piglrlfsns snghsftvsy ltnkcgfspa
       61 lasrvsnfvh fetpekpdsl ivflenhgfs qtqianlikr qprfllsdte ktllpklefl
      121 ysigfsrpel akllsshphl lkyslkkqii psfnllrdlf qsddktikai krfagilvny
      181 sksylypnmn vlrgigvpes nilmllnrhp rtflyspvrl keiveevkgm gidsstkkfl
      241 vavlalrsms kstlekkfdv yrrwgwsdqe ireafqrypp ciavsedkim aimdflvnkm
      301 gynstliakq ssvlsrslri ivpralfaqe llsqglvndf klsvlfdtse kvfirmfvdr
      361 fvnkapdllk lykeklkise kklevs
//
LOCUS       XP_040942652             383 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF8, chloroplastic-like
            [Gossypium hirsutum].
ACCESSION   XP_040942652
VERSION     XP_040942652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086718.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..383
                     /product="transcription termination factor MTERF8,
                     chloroplastic-like"
                     /calculated_mol_wt=44412
     Region          83..354
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..383
                     /gene="LOC121202891"
                     /coded_by="XM_041086718.1:186..1337"
                     /db_xref="GeneID:121202891"
ORIGIN      
        1 mfysifrtsf lhgrqamacp qsfnlsmikk sttlrcfsnt snqnsftvsy lmnkcgftpe
       61 fasfaskyvh fetperpdsl faflenhgfs ktqilnlikr rprlliydte ktllpkleff
      121 ysigfsrpel tkiltsypav licslkkqii psfnllrnlf qsddkaikti krygaifvye
      181 fernlipnmn vlrgigvpes nilmllnhqp rpllydqvrl keiveevkrm gfdsstkkfi
      241 dvvialssms kstlekkfdv yrrwgwsdqe iheafqrypm cmavsedkim avmdflvnkm
      301 gysstlvakq ssilrqslek rivpralfar ellsqglvtd fklsvlfhts ekvfvdrfkn
      361 kapdllklyk eklnasekkk elv
//
LOCUS       XP_040942653             744 aa            linear   PLN 06-AUG-2024
DEFINITION  cullin-1 [Gossypium hirsutum].
ACCESSION   XP_040942653
VERSION     XP_040942653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086719.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..744
                     /product="cullin-1"
                     /calculated_mol_wt=86722
     Region          15..647
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     Region          674..736
                     /region_name="Cullin_Nedd8"
                     /note="Cullin protein neddylation domain; pfam10557"
                     /db_xref="CDD:463146"
     CDS             1..744
                     /gene="LOC107936141"
                     /coded_by="XM_041086719.1:222..2456"
                     /db_xref="GeneID:107936141"
ORIGIN      
        1 mtmnerktid leqgwefmqk gitklknile glpepqfsse dymmlyttiy nmctqkpphd
       61 ysqqlydkyr esfeeyitss vlpslrekhd efmlrelvkr wtnhkvmvrw lsrffhyldr
      121 yfiarrslpp lnevgltcfr elvyqevnak vrdavislid qeregeqidr allknvldif
      181 veigmgqmdy yendfeatml kdtaayysrk aanwivddsc pdymlkaeec lkrekdrvsn
      241 ylhsssepkl lekvqhells vwanrlldke hsgchallrd dkvedlsrmf rlfskiprgl
      301 dpvsstfkqh vtaegtalvk laedaastkk aekrdvvglq eqvfvrkvie lhdkylaymn
      361 dcfqnhtlfh kalkeafeaf cnkgvagsss aellatfcdn ilkkggsekl sdeaieetle
      421 kvvkllayis dkdlfaefyr kklarrllfd ksanddhers iltklkqqcg gqftskmegm
      481 vtdltlaren qtnfeeylsn npnanpgidl tvtvlttgfw psyksfdlnl paemikcvev
      541 frdfyqtktk hrkltwmysl gtcnligkfe pktmelivtt yqasalllfn ssdrlsysei
      601 miqlnltddd vvrllhslsc akykilnkep stktisstdq fefnskftdk mrrikiplpp
      661 vdekkkvied vdkdrryaid asivrimksr kvlghqqlvm ecveqlgrmf kpdfkvikkr
      721 iedlitrdyl erdkdnpnmf ryla
//
LOCUS       XP_040942654             744 aa            linear   PLN 06-AUG-2024
DEFINITION  cullin-1 [Gossypium hirsutum].
ACCESSION   XP_040942654
VERSION     XP_040942654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086720.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..744
                     /product="cullin-1"
                     /calculated_mol_wt=86722
     Region          15..647
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     Region          674..736
                     /region_name="Cullin_Nedd8"
                     /note="Cullin protein neddylation domain; pfam10557"
                     /db_xref="CDD:463146"
     CDS             1..744
                     /gene="LOC107936141"
                     /coded_by="XM_041086720.1:153..2387"
                     /db_xref="GeneID:107936141"
ORIGIN      
        1 mtmnerktid leqgwefmqk gitklknile glpepqfsse dymmlyttiy nmctqkpphd
       61 ysqqlydkyr esfeeyitss vlpslrekhd efmlrelvkr wtnhkvmvrw lsrffhyldr
      121 yfiarrslpp lnevgltcfr elvyqevnak vrdavislid qeregeqidr allknvldif
      181 veigmgqmdy yendfeatml kdtaayysrk aanwivddsc pdymlkaeec lkrekdrvsn
      241 ylhsssepkl lekvqhells vwanrlldke hsgchallrd dkvedlsrmf rlfskiprgl
      301 dpvsstfkqh vtaegtalvk laedaastkk aekrdvvglq eqvfvrkvie lhdkylaymn
      361 dcfqnhtlfh kalkeafeaf cnkgvagsss aellatfcdn ilkkggsekl sdeaieetle
      421 kvvkllayis dkdlfaefyr kklarrllfd ksanddhers iltklkqqcg gqftskmegm
      481 vtdltlaren qtnfeeylsn npnanpgidl tvtvlttgfw psyksfdlnl paemikcvev
      541 frdfyqtktk hrkltwmysl gtcnligkfe pktmelivtt yqasalllfn ssdrlsysei
      601 miqlnltddd vvrllhslsc akykilnkep stktisstdq fefnskftdk mrrikiplpp
      661 vdekkkvied vdkdrryaid asivrimksr kvlghqqlvm ecveqlgrmf kpdfkvikkr
      721 iedlitrdyl erdkdnpnmf ryla
//
LOCUS       XP_016724305             193 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosome subunit biogenesis protein NIP7 homolog [Gossypium
            hirsutum].
ACCESSION   XP_016724305
VERSION     XP_016724305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868816.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="60S ribosome subunit biogenesis protein NIP7
                     homolog"
                     /calculated_mol_wt=21382
     Region          2..96
                     /region_name="Nip7_N_euk"
                     /note="N-terminal domain of eukaryotic 60S ribosome
                     subunit biogenesis protein Nip7 and similar proteins;
                     cd21146"
                     /db_xref="CDD:409283"
     Site            order(18..19,91..92,94)
                     /site_type="other"
                     /note="PUA domain interface [polypeptide binding]"
                     /db_xref="CDD:409283"
     Region          103..180
                     /region_name="PUA_Nip7-like"
                     /note="PUA RNA binding domain of ribosome assembly factor
                     Nip7 and similar proteins; cd21151"
                     /db_xref="CDD:409293"
     Site            order(108,114,116..118,120..122,171..174)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409293"
     CDS             1..193
                     /gene="LOC107936146"
                     /coded_by="XM_016868816.2:116..697"
                     /db_xref="GeneID:107936146"
ORIGIN      
        1 mrpldekett avfekifkft gnnlkniven pshegpdkep grycfrlhkn kvyyvsdslv
       61 kratnvartk lasigtcvgr fthggnfhlt ieclnllaan akhkvwlkpt semsflyanh
      121 vlkgglgrit esiapgdgvv vfsmsdlplg fgvaakstqd crkldpnaiv vlhqadigey
      181 lrmenqheqi iee
//
LOCUS       XP_016724306             193 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosome subunit biogenesis protein NIP7 homolog [Gossypium
            hirsutum].
ACCESSION   XP_016724306
VERSION     XP_016724306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868817.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="60S ribosome subunit biogenesis protein NIP7
                     homolog"
                     /calculated_mol_wt=21382
     Region          2..96
                     /region_name="Nip7_N_euk"
                     /note="N-terminal domain of eukaryotic 60S ribosome
                     subunit biogenesis protein Nip7 and similar proteins;
                     cd21146"
                     /db_xref="CDD:409283"
     Site            order(18..19,91..92,94)
                     /site_type="other"
                     /note="PUA domain interface [polypeptide binding]"
                     /db_xref="CDD:409283"
     Region          103..180
                     /region_name="PUA_Nip7-like"
                     /note="PUA RNA binding domain of ribosome assembly factor
                     Nip7 and similar proteins; cd21151"
                     /db_xref="CDD:409293"
     Site            order(108,114,116..118,120..122,171..174)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409293"
     CDS             1..193
                     /gene="LOC107936146"
                     /coded_by="XM_016868817.2:67..648"
                     /db_xref="GeneID:107936146"
ORIGIN      
        1 mrpldekett avfekifkft gnnlkniven pshegpdkep grycfrlhkn kvyyvsdslv
       61 kratnvartk lasigtcvgr fthggnfhlt ieclnllaan akhkvwlkpt semsflyanh
      121 vlkgglgrit esiapgdgvv vfsmsdlplg fgvaakstqd crkldpnaiv vlhqadigey
      181 lrmenqheqi iee
//
LOCUS       XP_016724307             193 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosome subunit biogenesis protein NIP7 homolog [Gossypium
            hirsutum].
ACCESSION   XP_016724307
VERSION     XP_016724307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868818.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="60S ribosome subunit biogenesis protein NIP7
                     homolog"
                     /calculated_mol_wt=21382
     Region          2..96
                     /region_name="Nip7_N_euk"
                     /note="N-terminal domain of eukaryotic 60S ribosome
                     subunit biogenesis protein Nip7 and similar proteins;
                     cd21146"
                     /db_xref="CDD:409283"
     Site            order(18..19,91..92,94)
                     /site_type="other"
                     /note="PUA domain interface [polypeptide binding]"
                     /db_xref="CDD:409283"
     Region          103..180
                     /region_name="PUA_Nip7-like"
                     /note="PUA RNA binding domain of ribosome assembly factor
                     Nip7 and similar proteins; cd21151"
                     /db_xref="CDD:409293"
     Site            order(108,114,116..118,120..122,171..174)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409293"
     CDS             1..193
                     /gene="LOC107936146"
                     /coded_by="XM_016868818.2:67..648"
                     /db_xref="GeneID:107936146"
ORIGIN      
        1 mrpldekett avfekifkft gnnlkniven pshegpdkep grycfrlhkn kvyyvsdslv
       61 kratnvartk lasigtcvgr fthggnfhlt ieclnllaan akhkvwlkpt semsflyanh
      121 vlkgglgrit esiapgdgvv vfsmsdlplg fgvaakstqd crkldpnaiv vlhqadigey
      181 lrmenqheqi iee
//
LOCUS       XP_016724308             112 aa            linear   PLN 06-AUG-2024
DEFINITION  flowering-promoting factor 1-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016724308
VERSION     XP_016724308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868819.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="flowering-promoting factor 1-like protein 3"
                     /calculated_mol_wt=12927
     CDS             1..112
                     /gene="LOC107936147"
                     /coded_by="XM_016868819.2:59..397"
                     /db_xref="GeneID:107936147"
ORIGIN      
        1 msgvwvfkng vvrlvenpgv dsfdgsrqgs ntrrklliht psneaitsya ilerklsilg
       61 weryyddpdl lqfhkrstvh lislpkdfsk fksmhmfdiv vknrnmfevr dv
//
LOCUS       XP_040942655             221 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated membrane protein 724 [Gossypium hirsutum].
ACCESSION   XP_040942655
VERSION     XP_040942655.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086721.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="vesicle-associated membrane protein 724"
                     /calculated_mol_wt=25089
     Region          7..120
                     /region_name="Longin"
                     /note="longin domain; cd14824"
                     /db_xref="CDD:341428"
     Site            order(7,28,31,50,53,55)
                     /site_type="lipid-binding"
                     /note="lipid binding site [chemical binding]"
                     /db_xref="CDD:341428"
     Site            order(17,20,22,29,33,112,116,119)
                     /site_type="other"
                     /note="Sec22 interface [polypeptide binding]"
                     /db_xref="CDD:341428"
     Site            order(49,52,72,76)
                     /site_type="other"
                     /note="VARP interface [polypeptide binding]"
                     /db_xref="CDD:341428"
     Region          127..>195
                     /region_name="Synaptobrevin"
                     /note="pfam00957"
                     /db_xref="CDD:395764"
     CDS             1..221
                     /gene="LOC121213721"
                     /coded_by="XM_041086721.1:110..775"
                     /db_xref="GeneID:121213721"
ORIGIN      
        1 mslepfiysf vargtmilae yteftgnfpa iatqclqklp ssnnkftync dhhtfnflve
       61 dgyaycvvak dsvgkqisia flermkadfk krygggkadt aiakslnkef gpvmkehmky
      121 iiehaeeiek llkvkaqvse vksimlenid kaidrgenlt tladktenlr dqaqayrnqg
      181 tkirrkmwyq nmkiklvvlg ilvllilviw lsvchgfdct n
//
LOCUS       XP_016724297             464 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 2 subunit 3 [Gossypium
            hirsutum].
ACCESSION   XP_016724297
VERSION     XP_016724297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868808.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..464
                     /product="eukaryotic translation initiation factor 2
                     subunit 3"
                     /calculated_mol_wt=50630
     Region          1..459
                     /region_name="PTZ00327"
                     /note="eukaryotic translation initiation factor 2 gamma
                     subunit; Provisional"
                     /db_xref="CDD:240362"
     CDS             1..464
                     /gene="LOC107936138"
                     /coded_by="XM_016868808.2:161..1555"
                     /db_xref="GeneID:107936138"
ORIGIN      
        1 msrkglmeqd lskldvtklh plspevisrq atinigtigh vahgkstvvk aisgvqtvrf
       61 knelerniti klgyanakiy kcedercprp msfkaygsgk edsplcdvpg fencrmkllr
      121 hvsfvdcpgh dilmatmlng aaimdgalll iaanescpqp qtsehlaave imrlqyiiil
      181 qnkvdliqen vainqheaiq kfiqgtvadg apvvpisaql kynidvvcey ivkkipiper
      241 nfisppnmiv irsfdvnkpg fevdeikggv aggsilqgvl kvnqfievrp givvkdengn
      301 ikctpiysri vslyaeqnel qfavpgglig vgttmdptlt radrlvgqvl gevgslpdvf
      361 velevnffll rrllgvrtkg serqgkvskl akgeilmlni gsmstgarvi avkndlaklq
      421 ltspvctskg ekialsrrve khwrligwgq iqagttlevp pcpl
//
LOCUS       XP_016724298             464 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 2 subunit 3 [Gossypium
            hirsutum].
ACCESSION   XP_016724298
VERSION     XP_016724298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868809.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..464
                     /product="eukaryotic translation initiation factor 2
                     subunit 3"
                     /calculated_mol_wt=50630
     Region          1..459
                     /region_name="PTZ00327"
                     /note="eukaryotic translation initiation factor 2 gamma
                     subunit; Provisional"
                     /db_xref="CDD:240362"
     CDS             1..464
                     /gene="LOC107936138"
                     /coded_by="XM_016868809.2:434..1828"
                     /db_xref="GeneID:107936138"
ORIGIN      
        1 msrkglmeqd lskldvtklh plspevisrq atinigtigh vahgkstvvk aisgvqtvrf
       61 knelerniti klgyanakiy kcedercprp msfkaygsgk edsplcdvpg fencrmkllr
      121 hvsfvdcpgh dilmatmlng aaimdgalll iaanescpqp qtsehlaave imrlqyiiil
      181 qnkvdliqen vainqheaiq kfiqgtvadg apvvpisaql kynidvvcey ivkkipiper
      241 nfisppnmiv irsfdvnkpg fevdeikggv aggsilqgvl kvnqfievrp givvkdengn
      301 ikctpiysri vslyaeqnel qfavpgglig vgttmdptlt radrlvgqvl gevgslpdvf
      361 velevnffll rrllgvrtkg serqgkvskl akgeilmlni gsmstgarvi avkndlaklq
      421 ltspvctskg ekialsrrve khwrligwgq iqagttlevp pcpl
//
LOCUS       XP_016724296             125 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RALF-like 33 [Gossypium hirsutum].
ACCESSION   XP_016724296
VERSION     XP_016724296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868807.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..125
                     /product="protein RALF-like 33"
                     /calculated_mol_wt=13695
     Region          2..125
                     /region_name="RALF"
                     /note="Rapid ALkalinization Factor (RALF); cl23823"
                     /db_xref="CDD:451565"
     CDS             1..125
                     /gene="LOC107936137"
                     /coded_by="XM_016868807.2:144..521"
                     /db_xref="GeneID:107936137"
ORIGIN      
        1 mrssrfsmfl aicailaihv avttssptfd fagdhflqik secsgstaec lmqggedssd
       61 fdaefamgse isrrilaarr yisygalrrn tvpcsrrgas yyncrpgaqa npysrgcsri
      121 trcrr
//
LOCUS       XP_040942656             225 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acylpyruvase FAHD1, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040942656
VERSION     XP_040942656.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086722.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="probable acylpyruvase FAHD1, mitochondrial"
                     /calculated_mol_wt=23841
     Region          15..209
                     /region_name="YcgM"
                     /note="2-keto-4-pentenoate
                     hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
                     (catechol pathway) [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG0179"
                     /db_xref="CDD:439949"
     CDS             1..225
                     /gene="LOC121213722"
                     /coded_by="XM_041086722.1:82..759"
                     /db_xref="GeneID:121213722"
ORIGIN      
        1 maaagslqnl lklgtkivgv grnyaahake lgnavpkepv lflkptssyl enggtievph
       61 plnsldyeve lavvigktar dvpentamny vggyavaldm tareiqsvak saglpwtvak
      121 gqdtftpiss vfsvsmvpnp dnlelwlkvd deirqkgstk dmifkipyli shissimtlf
      181 egdtiltgtp qgvgpvkvgq kitagitglv dvcfdvgkrq kpgst
//
LOCUS       XP_016724259             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724259
VERSION     XP_016724259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14153
     CDS             1..124
                     /gene="LOC107936109"
                     /coded_by="XM_016868770.2:403..777"
                     /db_xref="GeneID:107936109"
ORIGIN      
        1 mpshaflffi avqidpaghh rrvcrfqttn evhylvsavv pawcilvvpl lhrgtsllls
       61 tsppsfdygi srdlsprkql keeaellveq lmvsvqyaav sfmqwgtqwr likwkifyls
      121 lliv
//
LOCUS       XP_016724226             286 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL2 [Gossypium hirsutum].
ACCESSION   XP_016724226
VERSION     XP_016724226.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868737.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..286
                     /product="RING-H2 finger protein ATL2"
                     /calculated_mol_wt=31673
     Region          <85..240
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          113..156
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            141..146
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..286
                     /gene="LOC107936086"
                     /coded_by="XM_016868737.2:309..1169"
                     /db_xref="GeneID:107936086"
ORIGIN      
        1 msetdngfgg ssdipmdnnn syalsgriml stivvlffvv ilafifhlya rwyilrsrsr
       61 rssgrrnrrl tqfvfyvdpn snaaanrgld arvlkslpvf tfssethpds alecavclse
      121 feenesgrvl pkcnhsfhla cidmwfhshs tcplcrtpve eykpvsdnpg dlvltineps
      181 egesgsdrss dlcatcrhee ghedssavgy rrklsieisr ntegfvgess gwnsgpspay
      241 rspmtrmlsf krilsrdrrg sgtisvpesd ierggdetpq tqgllg
//
LOCUS       XP_040942657            1106 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D zeta 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942657
VERSION     XP_040942657.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086723.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1106
                     /product="phospholipase D zeta 1 isoform X1"
                     /calculated_mol_wt=125936
     Region          36..1106
                     /region_name="PLN02866"
                     /note="phospholipase D"
                     /db_xref="CDD:215467"
     CDS             1..1106
                     /gene="LOC121213723"
                     /coded_by="XM_041086723.1:330..3650"
                     /db_xref="GeneID:121213723"
ORIGIN      
        1 mateqlmpgg gfrhfqmqsd tlpsmmssff sfapgvtpea trifdelpka sivsvsrpda
       61 gdispmllsy tmefqykqfr wqllkkasdv fylhfalkkr lfieeihekq eqvkewlqnl
      121 gigdhppvvh ddderdddav plhhdesakn rdvpssaalp virpalgrqs sisdrakvam
      181 qeylnhflgn mdivnsrevc kflevsklsf speygpklke ayvmvkhlpk iaknddsdrc
      241 cachwfnccn dnwqkvwavl kpgflalled pfnakpldii vfdvlpasdg ngegrvslae
      301 evkernplrh sfkvtcgvrs iklrtkssak vkdwvaaind agfrppegwc hphrfgsfap
      361 prgltedgsq aqwfidgmaa fdaiasaied akseificgw wlcpelylrr pfreqassrl
      421 dslleakakq gvqiyillyk elalalkins vyskrkllsi henvrvlryp dhfsagvylw
      481 shheklvivd yqicfiggld lcfgrydtfe hkvgdnpplv wpgkdyynpr esepnswedt
      541 mkdeldrgkf prmpwhdvhc alwgppcrdv arhfvqrwny akrnkalyee aipllmphhh
      601 mviphymgrs keieiegksv ldntedidre dyfcsrsavq diplllpqea eldncngfpk
      661 snaldstagt svsfafrksk iepavtdtpm kgfvddpdsl dlrmerssdv krklgskaad
      721 pewwetqerg dqvgfvdeag qvgprtscrc qiirsvsqws agtsqveesi hcaycsliek
      781 aehfvyienq ffisglsgde iirnrvleal yrrimraynd kkcfrviivi pllpgfqggl
      841 ddagaasvra imhwqyrtic rgqnsilhkl hkvlgpkthd yisfyglrsy gklfdhgpva
      901 tspvyvhski mliddskali gsanindrsl lgsrdseigv liedkelvds rmggnpwkvg
      961 kftlslrlsl wsehldlrkg einqiidpis dssykeiwva takmnttiyq dvfacvpndi
     1021 ihsrltlrqs ltfwkerlgh ttidlgiapk klesyhngdi kqtdpmdrlk svrghlvsfp
     1081 ldfmcnedlr pvfneseyya spqvfh
//
LOCUS       XP_040942658             927 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D zeta 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942658
VERSION     XP_040942658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086724.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="phospholipase D zeta 1 isoform X2"
                     /calculated_mol_wt=105684
     Region          1..927
                     /region_name="PLN02866"
                     /note="phospholipase D"
                     /db_xref="CDD:215467"
     CDS             1..927
                     /gene="LOC121213723"
                     /coded_by="XM_041086724.1:279..3062"
                     /db_xref="GeneID:121213723"
ORIGIN      
        1 mqeylnhflg nmdivnsrev ckflevskls fspeygpklk eayvmvkhlp kiaknddsdr
       61 ccachwfncc ndnwqkvwav lkpgflalle dpfnakpldi ivfdvlpasd gngegrvsla
      121 eevkernplr hsfkvtcgvr siklrtkssa kvkdwvaain dagfrppegw chphrfgsfa
      181 pprgltedgs qaqwfidgma afdaiasaie dakseificg wwlcpelylr rpfreqassr
      241 ldslleakak qgvqiyilly kelalalkin svyskrklls ihenvrvlry pdhfsagvyl
      301 wshheklviv dyqicfiggl dlcfgrydtf ehkvgdnppl vwpgkdyynp resepnswed
      361 tmkdeldrgk fprmpwhdvh calwgppcrd varhfvqrwn yakrnkalye eaipllmphh
      421 hmviphymgr skeieiegks vldntedidr edyfcsrsav qdiplllpqe aeldncngfp
      481 ksnaldstag tsvsfafrks kiepavtdtp mkgfvddpds ldlrmerssd vkrklgskaa
      541 dpewwetqer gdqvgfvdea gqvgprtscr cqiirsvsqw sagtsqvees ihcaycslie
      601 kaehfvyien qffisglsgd eiirnrvlea lyrrimrayn dkkcfrviiv ipllpgfqgg
      661 lddagaasvr aimhwqyrti crgqnsilhk lhkvlgpkth dyisfyglrs ygklfdhgpv
      721 atspvyvhsk imliddskal igsanindrs llgsrdseig vliedkelvd srmggnpwkv
      781 gkftlslrls lwsehldlrk geinqiidpi sdssykeiwv atakmnttiy qdvfacvpnd
      841 iihsrltlrq sltfwkerlg httidlgiap kklesyhngd ikqtdpmdrl ksvrghlvsf
      901 pldfmcnedl rpvfneseyy aspqvfh
//
LOCUS       XP_040942659             927 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D zeta 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942659
VERSION     XP_040942659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086725.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="phospholipase D zeta 1 isoform X2"
                     /calculated_mol_wt=105684
     Region          1..927
                     /region_name="PLN02866"
                     /note="phospholipase D"
                     /db_xref="CDD:215467"
     CDS             1..927
                     /gene="LOC121213723"
                     /coded_by="XM_041086725.1:188..2971"
                     /db_xref="GeneID:121213723"
ORIGIN      
        1 mqeylnhflg nmdivnsrev ckflevskls fspeygpklk eayvmvkhlp kiaknddsdr
       61 ccachwfncc ndnwqkvwav lkpgflalle dpfnakpldi ivfdvlpasd gngegrvsla
      121 eevkernplr hsfkvtcgvr siklrtkssa kvkdwvaain dagfrppegw chphrfgsfa
      181 pprgltedgs qaqwfidgma afdaiasaie dakseificg wwlcpelylr rpfreqassr
      241 ldslleakak qgvqiyilly kelalalkin svyskrklls ihenvrvlry pdhfsagvyl
      301 wshheklviv dyqicfiggl dlcfgrydtf ehkvgdnppl vwpgkdyynp resepnswed
      361 tmkdeldrgk fprmpwhdvh calwgppcrd varhfvqrwn yakrnkalye eaipllmphh
      421 hmviphymgr skeieiegks vldntedidr edyfcsrsav qdiplllpqe aeldncngfp
      481 ksnaldstag tsvsfafrks kiepavtdtp mkgfvddpds ldlrmerssd vkrklgskaa
      541 dpewwetqer gdqvgfvdea gqvgprtscr cqiirsvsqw sagtsqvees ihcaycslie
      601 kaehfvyien qffisglsgd eiirnrvlea lyrrimrayn dkkcfrviiv ipllpgfqgg
      661 lddagaasvr aimhwqyrti crgqnsilhk lhkvlgpkth dyisfyglrs ygklfdhgpv
      721 atspvyvhsk imliddskal igsanindrs llgsrdseig vliedkelvd srmggnpwkv
      781 gkftlslrls lwsehldlrk geinqiidpi sdssykeiwv atakmnttiy qdvfacvpnd
      841 iihsrltlrq sltfwkerlg httidlgiap kklesyhngd ikqtdpmdrl ksvrghlvsf
      901 pldfmcnedl rpvfneseyy aspqvfh
//
LOCUS       XP_040942660             640 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942660
VERSION     XP_040942660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086726.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..640
                     /product="uncharacterized protein"
                     /calculated_mol_wt=69741
     Region          14..633
                     /region_name="PLN02847"
                     /note="triacylglycerol lipase"
                     /db_xref="CDD:178439"
     CDS             1..640
                     /gene="LOC121213724"
                     /coded_by="XM_041086726.1:264..2186"
                     /db_xref="GeneID:121213724"
ORIGIN      
        1 maagtmataa gaavilyyvw lrksevktdg vgseededls kssrsvkrri vrrpaqapat
       61 wleaiatise tlrftysetl gkwpigdlaf dinylmrrqg nfevasvyag dncvelkgee
      121 ikkelnnllr lltlcrlfsk kpfpvfldsa gyseedallh kpkaglmkpa ftiirdensk
      181 cflllirgth sikdtltaat gavvpfhhsv lhdggvsnlv lgyahcgmva aarwiaklta
      241 pcllkaiaqy pdykvkivgh slgggtaall tyilrehkef aasttcftfa paacmtwdla
      301 esgkhfitti ingsdlvptf saasvddlrt evttsswlnd lrdqvertkv lnvvyrsata
      361 lgsrlpsmat akasvagaga llrpvssstk vvmkgaqnva qavvrsrssl tswscigprr
      421 rnvvsglnak gddmtkpslt sktsskalvt evdchsgggl dhndtdedep liemdrgitt
      481 sttdefvgge lwyelekelk rqesevdlhg caeeaaaake iseqenviaa dvssesrsai
      541 sssdasenlr fyppgrimhi vampssdaav lddhdgdgng dgsnngkvri yetprelysk
      601 irlsrtmind hympmykkmm elliielekd edckfdvlqd
//
LOCUS       XP_016724283             302 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724283
VERSION     XP_016724283.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868794.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34065
     CDS             1..302
                     /gene="LOC107936127"
                     /coded_by="XM_016868794.2:32..940"
                     /db_xref="GeneID:107936127"
ORIGIN      
        1 msnslfpsvs hsfpptvlhi rvfplratis ipiavsarty pstlnrrflw ipspimssnt
       61 klaatqpelc qlndssdfek llspsgyisi cgfgsllser sarstfpnll nfrvaklkgf
      121 rrvfahvapi ffdrgiakpe tkeisslsve pcegetlivt vfeiqkseip afmerelefr
      181 flavlpetld gepfanpavl ctrysdeeff qirckgnkdi yfqhygryni ekiwrddilp
      241 crvylrhcvl aaknlgdiay nnfldhtflg drtatirtyl attgsgimee eppeslksry
      301 gg
//
LOCUS       XP_016724251             272 aa            linear   PLN 06-AUG-2024
DEFINITION  meiotically up-regulated gene 184 protein [Gossypium hirsutum].
ACCESSION   XP_016724251
VERSION     XP_016724251.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868762.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724251.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="meiotically up-regulated gene 184 protein"
                     /calculated_mol_wt=31153
     Region          47..108
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(75..77,85,88..89,92..93)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..272
                     /gene="LOC107936102"
                     /coded_by="XM_016868762.2:224..1042"
                     /db_xref="GeneID:107936102"
ORIGIN      
        1 mgrigfesll dsksqlvlei csisttnpia cshrhhiehl vkspfidwyr llgvaedags
       61 elikrryhkl alqlhpdknk hpkadvafkl vseaysclsd nvkrrafnse rwkhvctecs
      121 nnnphpnpnp linntqnpsk pksqqhpiss skpgkslqil tdirnrlkee irviehclkv
      181 nsrkespvfn psnnhhchng ikhriqretp ifepseyafh gyphlrsevy resdrlrhlk
      241 rgslkgkrgs ygspifepvk grfgdvfktq ic
//
LOCUS       XP_016724281             676 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ARR2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724281
VERSION     XP_016724281.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868792.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724281.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..676
                     /product="two-component response regulator ARR2 isoform
                     X1"
                     /calculated_mol_wt=74199
     Region          37..151
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     Site            order(41..42,87)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:381121"
     Region          215..268
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..676
                     /gene="LOC107936125"
                     /coded_by="XM_016868792.2:259..2289"
                     /db_xref="GeneID:107936125"
ORIGIN      
        1 mknssggkgs mstassittw kadvvpvpdq fpaglrvlvv dddptcliil ekmlrncsyd
       61 vtkcnraeta llklrenrng fdivisdvhm pdmdgfklle higlemdlpv immsaddgkd
      121 vvmkgvthga cdylikpvri ealkniwqhv vrkrknewkd leqsgsveeg drqpkqseda
      181 dysssvnegn wksskkrkdd edetedrddt stlkkprvvw svelhqqfva avnqlgidka
      241 vpkkilelmn vpgltrenva shlqkyrlyl rrlsgvsphs cnpnnsfmnp qdetfgplss
      301 vhgldlqtlt atgqlpaqcl atlqaavlgr stakssipmp lvnqrnifsf enpklrfgeg
      361 qqhvnnnnkq vnllhgiptt meskqltslr htsqsignvn mqvaphgaqs sqnnssliem
      421 gqplsrvqil ndstvplsvg qpivpngiaa nvstrngipe nirapgynlv sqtssilnfp
      481 mnhaselpvd sfslrstpgm sdhtskgafh edfnseikgs ggflptydvf ndyqyksqnw
      541 elqnagmile dsqhsnslqg nldlaqsvlv qqgfpsgqin gqnrsvpivs kamfsagdst
      601 epgnllnvnh hlntiraent vrvksgsvad gnpsnlfadh fgqedlmial lkqqqgiapa
      661 enefdfdgys ldnipv
//
LOCUS       XP_040942661             525 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ARR1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942661
VERSION     XP_040942661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086727.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..525
                     /product="two-component response regulator ARR1 isoform
                     X2"
                     /calculated_mol_wt=57938
     Region          37..151
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     Region          215..268
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..525
                     /gene="LOC107936125"
                     /coded_by="XM_041086727.1:260..1837"
                     /db_xref="GeneID:107936125"
ORIGIN      
        1 mknssggkgs mstassittw kadvvpvpdq fpaglrvlvv dddptcliil ekmlrncsyd
       61 vtkcnraeta llklrenrng fdivisdvhm pdmdgfklle higlemdlpv immsaddgkd
      121 vvmkgvthga cdylikpvri ealkniwqhv vrkrknewkd leqsgsveeg drqpkqseda
      181 dysssvnegn wksskkrkdd edetedrddt stlkkprvvw svelhqqfva avnqlgidka
      241 vpkkilelmn vpgltrenva shlqkyrlyl rrlsgvsphs cnpnnsfmnp qdetfgplss
      301 vhgldlqtlt atgqlpaqcl atlqaavlgr stakssipmp lvnqrnifsf enpklrfgeg
      361 qqhvnnnnkq vnllhgiptt meskqltslr htsqsignvn mqvaphgaqs sqnnssliem
      421 gqplsrvqil ndstvplsvg qpivpngiaa nvstrngipe nirapgynlv sqtssilnfp
      481 mnhaselpvd sfslrstpgm sdhtskecrh dirrlsafkl ssrqp
//
LOCUS       XP_016724246             179 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ARR2 [Gossypium hirsutum].
ACCESSION   XP_016724246
VERSION     XP_016724246.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868757.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724246.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="two-component response regulator ARR2"
                     /calculated_mol_wt=20196
     Region          57..171
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     CDS             1..179
                     /gene="LOC107936099"
                     /coded_by="XM_016868757.2:76..615"
                     /db_xref="GeneID:107936099"
ORIGIN      
        1 mliiqtkslf lfhlyisqlw llffntmnps ngngsmstas ssgawdgrdq fpaglrvlvv
       61 dddptclmif ekmlkaclyq vtkcnkaeta lsvlrehkne fdivisdvhm pdmdgfellk
      121 hitsemdlpv ilisadarkq vvmegvtyga cdylikpvri etlkniwqhv vrkkarntv
//
LOCUS       XP_016724256             142 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 15 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724256
VERSION     XP_016724256.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868767.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="GATA transcription factor 15 isoform X1"
                     /calculated_mol_wt=15589
     Region          46..80
                     /region_name="GATA"
                     /note="GATA zinc finger; pfam00320"
                     /db_xref="CDD:425605"
     Site            order(46,49,68,71)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(55..56,58,68..78)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..142
                     /gene="LOC107936107"
                     /coded_by="XM_016868767.2:313..741"
                     /db_xref="GeneID:107936107"
ORIGIN      
        1 mldpsekhif lqgsnskdpn rkppetispk itqnqiicne qinktcancg tsktplwrgg
       61 pagpkslcna cgiksrkkrr avldkksknp knlgdnlkqr lislgrkvlm qkstvenqmr
      121 klgeeeqaal llmalsygsv ya
//
LOCUS       XP_016724257             137 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 15 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724257
VERSION     XP_016724257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868768.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..137
                     /product="GATA transcription factor 15 isoform X2"
                     /calculated_mol_wt=14950
     Region          41..75
                     /region_name="GATA"
                     /note="GATA zinc finger; pfam00320"
                     /db_xref="CDD:425605"
     Site            order(41,44,63,66)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(50..51,53,63..73)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..137
                     /gene="LOC107936107"
                     /coded_by="XM_016868768.2:292..705"
                     /db_xref="GeneID:107936107"
ORIGIN      
        1 mldpsekgsn skdpnrkppe tispkitqnq iicneqinkt cancgtsktp lwrggpagpk
       61 slcnacgiks rkkrravldk ksknpknlgd nlkqrlislg rkvlmqkstv enqmrklgee
      121 eqaalllmal sygsvya
//
LOCUS       XP_016724263              78 aa            linear   PLN 06-AUG-2024
DEFINITION  defensin D2 [Gossypium hirsutum].
ACCESSION   XP_016724263
VERSION     XP_016724263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868774.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..78
                     /product="defensin D2"
                     /calculated_mol_wt=8402
     Region          35..78
                     /region_name="Gamma-thionin"
                     /note="Gamma-thionin family; pfam00304"
                     /db_xref="CDD:395240"
     Site            order(45,51,55,65,72,74)
                     /site_type="active"
                     /note="knottin fold [active]"
                     /db_xref="CDD:238055"
     Site            order(64,73)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:238055"
     CDS             1..78
                     /gene="LOC107936112"
                     /coded_by="XM_016868774.2:64..300"
                     /db_xref="GeneID:107936112"
ORIGIN      
        1 merfsrsisi vvllmlvllt temgpvvadg dkicespsna fkglclrddn cdivcktegf
       61 pngdckgflr kcvctkpc
//
LOCUS       XP_040942662             529 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942662
VERSION     XP_040942662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086728.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="importin subunit alpha-2 isoform X1"
                     /calculated_mol_wt=58104
     Region          10..527
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          74..99
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          111..143
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(134,138,142,176,180,184,219,223,227)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          151..187
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          193..227
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          244..269
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(260,264,268,303,307,311,346,350,354)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          277..314
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          320..355
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          363..399
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          406..439
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..529
                     /gene="LOC121213725"
                     /coded_by="XM_041086728.1:229..1818"
                     /db_xref="GeneID:121213725"
ORIGIN      
        1 mslrpstrte arrnrykvav daeegrrrre dnmveirksk reqsllkkrr eglqaqqfaa
       61 slhssnvekk leslpsmvag vwsdngaaql eattqfrkll siersppiee viqsgvvprf
      121 veflgredfp qlqfeaawal tniasgtsdn tkvvidlgav pifvkllasp sddvreqavw
      181 algniagdsp rcrdlvlshg almpllaqln ehaklsmlrn atwtlsnfcr gkpqppfeqv
      241 tpalpalerl vhsndeevlt dacwalsyls dgtndkiqav iqagvcprlv elllsnpsps
      301 vlipslrtvg nivtgddlqt qciidhgala clmnlltnny kksikkeacw tisnitagnk
      361 eqiqavinag ligplvnllq naefdvkkea awaisnatsg gaheqikymv sqgcikplcd
      421 llacpdprii mvcleglenf lkvgeaekat gavefnfcaq liedadglek ienlqthdns
      481 eiyekavkil etywleedee tlppadgtqq sfqfgenglq vpsggfnfs
//
LOCUS       XP_040942663             528 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942663
VERSION     XP_040942663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086729.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..528
                     /product="importin subunit alpha-2 isoform X2"
                     /calculated_mol_wt=58017
     Region          10..526
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          74..99
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          111..143
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(134,138,142,176,180,184,219,223,227)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          151..187
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          193..227
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          244..269
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(260,264,268,302,306,310,345,349,353)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          277..313
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          319..354
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          362..398
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          405..438
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..528
                     /gene="LOC121213725"
                     /coded_by="XM_041086729.1:248..1834"
                     /db_xref="GeneID:121213725"
ORIGIN      
        1 mslrpstrte arrnrykvav daeegrrrre dnmveirksk reqsllkkrr eglqaqqfaa
       61 slhssnvekk leslpsmvag vwsdngaaql eattqfrkll siersppiee viqsgvvprf
      121 veflgredfp qlqfeaawal tniasgtsdn tkvvidlgav pifvkllasp sddvreqavw
      181 algniagdsp rcrdlvlshg almpllaqln ehaklsmlrn atwtlsnfcr gkpqppfeqv
      241 tpalpalerl vhsndeevlt dacwalsyls dgtndkiqav iqagvcprlv elllnpspsv
      301 lipslrtvgn ivtgddlqtq ciidhgalac lmnlltnnyk ksikkeacwt isnitagnke
      361 qiqavinagl igplvnllqn aefdvkkeaa waisnatsgg aheqikymvs qgcikplcdl
      421 lacpdpriim vcleglenfl kvgeaekatg avefnfcaql iedadgleki enlqthdnse
      481 iyekavkile tywleedeet lppadgtqqs fqfgenglqv psggfnfs
//
LOCUS       XP_016724235             114 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases II, IV and V subunit 9A [Gossypium
            hirsutum].
ACCESSION   XP_016724235
VERSION     XP_016724235.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868746.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="DNA-directed RNA polymerases II, IV and V
                     subunit 9A"
                     /calculated_mol_wt=12981
     Region          5..113
                     /region_name="RPB9"
                     /note="DNA-directed RNA polymerase, subunit
                     M/Transcription elongation factor TFIIS [Transcription];
                     COG1594"
                     /db_xref="CDD:441202"
     Region          64..113
                     /region_name="Zn-ribbon_RPB9"
                     /note="C-terminal zinc ribbon domain of RPB9 subunit of
                     RNA polymerase II; cd10508"
                     /db_xref="CDD:259793"
     Site            order(64,66..67,69,87..88,97..99)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:259793"
     Site            order(76,79,103,108)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259793"
     CDS             1..114
                     /gene="LOC107936094"
                     /coded_by="XM_016868746.2:165..509"
                     /db_xref="GeneID:107936094"
ORIGIN      
        1 mstmkfcrec nnilypkedr eqkillyacr ncdhqevaen ncvyrnevhh sagertqilq
       61 dvaadptlpr tkavicanck hgeavffqat argeegmtlf fvccnpncgh rwrd
//
LOCUS       XP_016724239             401 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724239
VERSION     XP_016724239.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868750.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724239.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=43826
     Region          64..>193
                     /region_name="HycB"
                     /note="Fe-S-cluster-containing hydrogenase component 2
                     [Energy production and conversion]; COG1142"
                     /db_xref="CDD:440757"
     Region          197..388
                     /region_name="LdpA_C"
                     /note="Iron-Sulfur binding protein C terminal; pfam12617"
                     /db_xref="CDD:463644"
     CDS             1..401
                     /gene="LOC107936096"
                     /coded_by="XM_016868750.2:100..1305"
                     /db_xref="GeneID:107936096"
ORIGIN      
        1 matsfycssa ihtqhqvnvs fgsknplqnv knliksfgip skscsphvsl qqgnwvklic
       61 gavdcidcaa dpsvinavne gietareivs irrpwvmisv nddedlhfrk aefdpedcps
      121 dcsrpcenvc panaisfere nstmevpfgs yqkakpkmqg gvitercygc grcfpvcpyd
      181 kireityvrd amataellkt ndvdaveiht sgrqtnlfke lwddlansvk ylrlvavslp
      241 dtgdatistm nqmyaimeph lscfnlwqld grpmsgdigr gatresiafa vrvaasserp
      301 pgflqlaggt nvhtvdglkk rglfrthitc aepnhlqsli ggiayggyar kivgrvlssm
      361 gsengvtgie chaehllkal kealhlvgsv ksynhpdgmq r
//
LOCUS       XP_016724241             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724241
VERSION     XP_016724241.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868752.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724241.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..399
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=43567
     Region          64..>191
                     /region_name="HycB"
                     /note="Fe-S-cluster-containing hydrogenase component 2
                     [Energy production and conversion]; COG1142"
                     /db_xref="CDD:440757"
     Region          195..386
                     /region_name="LdpA_C"
                     /note="Iron-Sulfur binding protein C terminal; pfam12617"
                     /db_xref="CDD:463644"
     CDS             1..399
                     /gene="LOC107936096"
                     /coded_by="XM_016868752.2:100..1299"
                     /db_xref="GeneID:107936096"
ORIGIN      
        1 matsfycssa ihtqhqvnvs fgsknplqnv knliksfgip skscsphvsl qqgnwvklic
       61 gavdcidcaa dpsvinavne gietareivs irrpwvmisv nddedlhfrk aefdpedcps
      121 dcsrpcenvc panaisfere nstmevpfgs yqkakpkggv itercygcgr cfpvcpydki
      181 reityvrdam ataellktnd vdaveihtsg rqtnlfkelw ddlansvkyl rlvavslpdt
      241 gdatistmnq myaimephls cfnlwqldgr pmsgdigrga tresiafavr vaasserppg
      301 flqlaggtnv htvdglkkrg lfrthitcae pnhlqsligg iayggyarki vgrvlssmgs
      361 engvtgiech aehllkalke alhlvgsvks ynhpdgmqr
//
LOCUS       XP_040942664             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942664
VERSION     XP_040942664.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086730.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=43499
     Region          60..>189
                     /region_name="HycB"
                     /note="Fe-S-cluster-containing hydrogenase component 2
                     [Energy production and conversion]; COG1142"
                     /db_xref="CDD:440757"
     Region          193..384
                     /region_name="LdpA_C"
                     /note="Iron-Sulfur binding protein C terminal; pfam12617"
                     /db_xref="CDD:463644"
     CDS             1..397
                     /gene="LOC107936096"
                     /coded_by="XM_041086730.1:91..1284"
                     /db_xref="GeneID:107936096"
ORIGIN      
        1 mylcnreigs ssyvvqdvvd irnlslvytl aggkdaklii grisllvpal cvsrifslfd
       61 cidcaadpsv inavnegiet areivsirrp wvmisvndde dlhfrkaefd pedcpsdcsr
      121 pcenvcpana isferenstm evpfgsyqka kpkmqggvit ercygcgrcf pvcpydkire
      181 ityvrdamat aellktndvd aveihtsgrq tnlfkelwdd lansvkylrl vavslpdtgd
      241 atistmnqmy aimephlscf nlwqldgrpm sgdigrgatr esiafavrva asserppgfl
      301 qlaggtnvht vdglkkrglf rthitcaepn hlqsliggia yggyarkivg rvlssmgsen
      361 gvtgiechae hllkalkeal hlvgsvksyn hpdgmqr
//
LOCUS       XP_040942665             371 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942665
VERSION     XP_040942665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086731.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=40685
     Region          28..>163
                     /region_name="HycB"
                     /note="Fe-S-cluster-containing hydrogenase component 2
                     [Energy production and conversion]; COG1142"
                     /db_xref="CDD:440757"
     Region          167..358
                     /region_name="LdpA_C"
                     /note="Iron-Sulfur binding protein C terminal; pfam12617"
                     /db_xref="CDD:463644"
     CDS             1..371
                     /gene="LOC107936096"
                     /coded_by="XM_041086731.1:91..1206"
                     /db_xref="GeneID:107936096"
ORIGIN      
        1 mylcnreigs ssyvvqdvvd irnlslvytl agvdcidcaa dpsvinavne gietareivs
       61 irrpwvmisv nddedlhfrk aefdpedcps dcsrpcenvc panaisfere nstmevpfgs
      121 yqkakpkmqg gvitercygc grcfpvcpyd kireityvrd amataellkt ndvdaveiht
      181 sgrqtnlfke lwddlansvk ylrlvavslp dtgdatistm nqmyaimeph lscfnlwqld
      241 grpmsgdigr gatresiafa vrvaasserp pgflqlaggt nvhtvdglkk rglfrthitc
      301 aepnhlqsli ggiayggyar kivgrvlssm gsengvtgie chaehllkal kealhlvgsv
      361 ksynhpdgmq r
//
LOCUS       XP_040942666             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942666
VERSION     XP_040942666.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086732.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=40426
     Region          28..>161
                     /region_name="HycB"
                     /note="Fe-S-cluster-containing hydrogenase component 2
                     [Energy production and conversion]; COG1142"
                     /db_xref="CDD:440757"
     Region          165..356
                     /region_name="LdpA_C"
                     /note="Iron-Sulfur binding protein C terminal; pfam12617"
                     /db_xref="CDD:463644"
     CDS             1..369
                     /gene="LOC107936096"
                     /coded_by="XM_041086732.1:91..1200"
                     /db_xref="GeneID:107936096"
ORIGIN      
        1 mylcnreigs ssyvvqdvvd irnlslvytl agvdcidcaa dpsvinavne gietareivs
       61 irrpwvmisv nddedlhfrk aefdpedcps dcsrpcenvc panaisfere nstmevpfgs
      121 yqkakpkggv itercygcgr cfpvcpydki reityvrdam ataellktnd vdaveihtsg
      181 rqtnlfkelw ddlansvkyl rlvavslpdt gdatistmnq myaimephls cfnlwqldgr
      241 pmsgdigrga tresiafavr vaasserppg flqlaggtnv htvdglkkrg lfrthitcae
      301 pnhlqsligg iayggyarki vgrvlssmgs engvtgiech aehllkalke alhlvgsvks
      361 ynhpdgmqr
//
LOCUS       XP_040942667             608 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-citrate synthase beta chain protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942667
VERSION     XP_040942667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086733.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..608
                     /product="ATP-citrate synthase beta chain protein 2"
                     /calculated_mol_wt=66040
     Region          1..608
                     /region_name="PLN02522"
                     /note="ATP citrate (pro-S)-lyase"
                     /db_xref="CDD:178137"
     CDS             1..608
                     /gene="LOC107936128"
                     /coded_by="XM_041086733.1:178..2004"
                     /db_xref="GeneID:107936128"
ORIGIN      
        1 matgqlfsrt tqalfynykq lpiqrmldfd flcgretpsv agiinpgaeg fqklffgqee
       61 iaipvhstie aactahptad vfinfasfrs aaassmaalk qptirvvaii aegvpesdtk
      121 qliayarsnn kvvigpatvg giqagafkig dtagtidniv qcklyrpgsv gfvsksggms
      181 nemyntiarv tdgiyegiai ggdvfpgstl sdhilrfnni pqvkmmvvlg elggrdeysl
      241 vealkqgkvn kpvvawvsgt carlfksevq fghagaksgg emesaqaknq alrdagavvp
      301 tsyeafeavi ketfdklveq gkitpvkevm ppqipedlnn aiksgkvrap thiistisdd
      361 rgeepcyagv pmssivergy gvgdvisllw fkrslpryct hfieicimlc adhgpcvsga
      421 hntivtarag kdlvsslvsg lltigprfgg aiddaaryfk daydrgltpy efvesmkkkg
      481 irvpgighri krgdnrdkrv ellqrfarth fpsvkymeya vqvetytlsk annlvlnvdg
      541 aigslfldll agsgmfskqe ideiveigyl nglfvlarsi glightfdqk rlkqplyrhp
      601 wedvlytk
//
LOCUS       XP_040942668             608 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-citrate synthase beta chain protein 2 [Gossypium hirsutum].
ACCESSION   XP_040942668
VERSION     XP_040942668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086734.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..608
                     /product="ATP-citrate synthase beta chain protein 2"
                     /calculated_mol_wt=66040
     Region          1..608
                     /region_name="PLN02522"
                     /note="ATP citrate (pro-S)-lyase"
                     /db_xref="CDD:178137"
     CDS             1..608
                     /gene="LOC107936128"
                     /coded_by="XM_041086734.1:243..2069"
                     /db_xref="GeneID:107936128"
ORIGIN      
        1 matgqlfsrt tqalfynykq lpiqrmldfd flcgretpsv agiinpgaeg fqklffgqee
       61 iaipvhstie aactahptad vfinfasfrs aaassmaalk qptirvvaii aegvpesdtk
      121 qliayarsnn kvvigpatvg giqagafkig dtagtidniv qcklyrpgsv gfvsksggms
      181 nemyntiarv tdgiyegiai ggdvfpgstl sdhilrfnni pqvkmmvvlg elggrdeysl
      241 vealkqgkvn kpvvawvsgt carlfksevq fghagaksgg emesaqaknq alrdagavvp
      301 tsyeafeavi ketfdklveq gkitpvkevm ppqipedlnn aiksgkvrap thiistisdd
      361 rgeepcyagv pmssivergy gvgdvisllw fkrslpryct hfieicimlc adhgpcvsga
      421 hntivtarag kdlvsslvsg lltigprfgg aiddaaryfk daydrgltpy efvesmkkkg
      481 irvpgighri krgdnrdkrv ellqrfarth fpsvkymeya vqvetytlsk annlvlnvdg
      541 aigslfldll agsgmfskqe ideiveigyl nglfvlarsi glightfdqk rlkqplyrhp
      601 wedvlytk
//
LOCUS       XP_016724231             110 aa            linear   PLN 06-AUG-2024
DEFINITION  huntingtin-interacting protein K [Gossypium hirsutum].
ACCESSION   XP_016724231
VERSION     XP_016724231.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868742.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..110
                     /product="huntingtin-interacting protein K"
                     /calculated_mol_wt=11898
     Region          69..109
                     /region_name="UBA_HYPK"
                     /note="UBA-like domain found in Huntingtin-interacting
                     protein K (HYPK) and similar proteins; cd14361"
                     /db_xref="CDD:270544"
     CDS             1..110
                     /gene="LOC107936091"
                     /coded_by="XM_016868742.2:168..500"
                     /db_xref="GeneID:107936091"
ORIGIN      
        1 meagdggvdr vvdskdlqqq skafdkltdr vedrqldssr aqsamasiaa saeaeknamr
       61 lrekelaavk inaaevdiia neleldkkva ertlrehkgd avaairsllh
//
LOCUS       XP_016724261             355 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pectinesterase 67 [Gossypium hirsutum].
ACCESSION   XP_016724261
VERSION     XP_016724261.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868772.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724261.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="probable pectinesterase 67"
                     /calculated_mol_wt=39765
     Region          14..355
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..355
                     /gene="LOC107936110"
                     /coded_by="XM_016868772.2:12..1079"
                     /db_xref="GeneID:107936110"
ORIGIN      
        1 mqspplplka fqnmspinla fasllivaiy fpcfangddk dpvtvldapf ltkkinsnvt
       61 ikvdingkgd ytsiqeaina vpkgnskwvv ihvkkgiyre kvhipkdkry ifmrgngrgr
      121 taiiwslssv dnkasatftv eakhfvafgi sfkneaptgv aytsqnqsva vfvgadrvaf
      181 yhcaffsthn tlfdykgrhy yhncyiqgsi dfifgrgrsl fhnceifvlq dkrivihgsi
      241 taqnrahqed hsgfvfvkgk vygiggvylg rakgkystvv faqtylsrti vpagwtdwsy
      301 rggpdhlfha eykchgpgad tfgrvhwakq ltdeeakywt siefingnvw lpawl
//
LOCUS       XP_040942669             264 aa            linear   PLN 06-AUG-2024
DEFINITION  probable enoyl-CoA hydratase 1, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040942669
VERSION     XP_040942669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086735.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..264
                     /product="probable enoyl-CoA hydratase 1, peroxisomal"
                     /calculated_mol_wt=28997
     Region          1..264
                     /region_name="PLN02888"
                     /note="enoyl-CoA hydratase"
                     /db_xref="CDD:215480"
     Site            order(30,32,64,68..72,108,110..112,134..135,138)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(70,112)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(100,121..124,136..139,145,147..149,151..152,
                     157..158,160..161,163..164,167,178,181,196)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..264
                     /gene="LOC121213727"
                     /coded_by="XM_041086735.1:143..937"
                     /db_xref="GeneID:121213727"
ORIGIN      
        1 msdsssenli lvsrepdgia tvtinrpasl nslsrlmitd larafkdlgr dgsvrviils
       61 gsgrafcsgl dltaaeqvfk ggmkdkeydp vfqmeqcpkp iigaingvav tagfeialac
      121 dilvaakgtk fmdthtrfgi vpswglsqkl priigpnkar evsltampft aeeaqklgfv
      181 nyvvegtell kkareiarvv ahnnhdivir yksvindgfk ldlhhalale keraykyyek
      241 mtteqfkkmq efvavrsskk sskl
//
LOCUS       XP_016724262             214 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: transcription factor bHLH147 [Gossypium
            hirsutum].
ACCESSION   XP_016724262
VERSION     XP_016724262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868773.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..214
                     /product="LOW QUALITY PROTEIN: transcription factor
                     bHLH147"
                     /calculated_mol_wt=23121
     Region          137..190
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(145..146,149,152..153,156,165..166,169..170,173,176,
                     179..180,183,186..187,189..190)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..214
                     /gene="LOC107936111"
                     /coded_by="XM_016868773.2:188..832"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:107936111"
ORIGIN      
        1 mastvmnpst nmnsdrrkmm mkkkkpmike nqinqshtrw ksetqqxifs sklvealshl
       61 slengstpsl saprggravr eatdkalait akgktrwsra iltgrlklkf rkrgsaadva
      121 aitgxsrskk prvsisklka rstpnvlrkv kvlgrlvlgc rkeplpvile katdyiatle
      181 mqvramttla ellsgsaans ssvppphspp ptrq
//
LOCUS       XP_016724309             196 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prefoldin subunit 3 [Gossypium hirsutum].
ACCESSION   XP_016724309
VERSION     XP_016724309.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868820.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..196
                     /product="probable prefoldin subunit 3"
                     /calculated_mol_wt=21666
     Region          48..175
                     /region_name="Prefoldin_3"
                     /note="Prefoldin subunit 3; cd23156"
                     /db_xref="CDD:467472"
     Site            order(48,51..52,55,159,162..163,165..167,169..170)
                     /site_type="other"
                     /note="prefoldin/TRiC interface [polypeptide binding]"
                     /db_xref="CDD:467472"
     Region          48..86
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467472"
     Site            order(75,78..79,82..83,85..86,96..103,105..114,117..121,
                     125..130,139)
                     /site_type="other"
                     /note="prefoldin oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467472"
     Region          133..175
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467472"
     CDS             1..196
                     /gene="LOC107936148"
                     /coded_by="XM_016868820.2:234..824"
                     /db_xref="GeneID:107936148"
ORIGIN      
        1 maaasssste spkttterrg ipgaqfvedv etyltqtgfd vnsalaflqe rlqqyklvem
       61 kllaqqrdlq akipdiekcl dvvatleakk gtgealiadf evsegiysra ciedndsvcl
      121 wlganvmley sceeatlllk knlenakasl evliadlqfl rdqvtvtqvt iarvynwdvh
      181 qrrirqiaas stskds
//
LOCUS       XP_040942670             499 aa            linear   PLN 06-AUG-2024
DEFINITION  galactokinase [Gossypium hirsutum].
ACCESSION   XP_040942670
VERSION     XP_040942670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086736.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..499
                     /product="galactokinase"
                     /calculated_mol_wt=54285
     Region          1..499
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..499
                     /gene="LOC121213728"
                     /coded_by="XM_041086736.1:106..1605"
                     /db_xref="GeneID:121213728"
ORIGIN      
        1 manhgelpip iysslepvyg egsqleeakl rfgklksrfl evfghppevf arspgrvnli
       61 gehidyegys vlpmairqdt ivairkrdkg eaekllrian vndkyttcty padpnqaidl
      121 knhrwghyfi cgykgyyeya kskgvdvgvp vgldvlidgt vptgsglsss aafvcsstia
      181 imaafgvnfp kkeiaqvtcd cerhigtqsg gmdqaisvma rngfaelidf npiratdvql
      241 paggtfvian slaeskkavt aatnynnrvv ecrlaaivlg iklgmksqea iakvktlsdv
      301 eglcvkfakg hgsndpvlav keylkekpyt aeeiekitek hlpsilgdnp tsldvlkaak
      361 hfklhqraah vfseanrvha fketveskls eeeklkklgd lmndshhscg vlyecscpel
      421 eelvkvcrnn galgarltga gwggctvalv kesivpqfia klteqfyksr idkgkinknd
      481 lglyvfaskp ssgaaiikf
//
LOCUS       XP_016724229             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724229
VERSION     XP_016724229.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868740.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23679
     CDS             1..223
                     /gene="LOC107936090"
                     /coded_by="XM_016868740.2:420..1091"
                     /db_xref="GeneID:107936090"
ORIGIN      
        1 mdemvsrfkd lelglengvs lsvgedsrfs kvegssvegs lssdasnsgr vcvenllsvn
       61 vegqedksgk enklvkekrk slghkkppkp prpprapslg aadqklikei aelarlkrar
      121 iermkalkkl katkpatsss snmfamvfti ifclvimfqg mspgstpsty qgspspaesg
      181 ltslqsstnp sasvrnqpgs qspylveqva gleshgklsk ssg
//
LOCUS       XP_016724230             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724230
VERSION     XP_016724230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868741.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23679
     CDS             1..223
                     /gene="LOC107936090"
                     /coded_by="XM_016868741.2:365..1036"
                     /db_xref="GeneID:107936090"
ORIGIN      
        1 mdemvsrfkd lelglengvs lsvgedsrfs kvegssvegs lssdasnsgr vcvenllsvn
       61 vegqedksgk enklvkekrk slghkkppkp prpprapslg aadqklikei aelarlkrar
      121 iermkalkkl katkpatsss snmfamvfti ifclvimfqg mspgstpsty qgspspaesg
      181 ltslqsstnp sasvrnqpgs qspylveqva gleshgklsk ssg
//
LOCUS       XP_016724234             172 aa            linear   PLN 06-AUG-2024
DEFINITION  cell wall / vacuolar inhibitor of fructosidase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016724234
VERSION     XP_016724234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868745.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="cell wall / vacuolar inhibitor of fructosidase
                     1"
                     /calculated_mol_wt=18700
     Region          24..169
                     /region_name="CIF_like"
                     /note="Cell-wall inhibitor of beta fructosidase and
                     similar proteins; cd15796"
                     /db_xref="CDD:275440"
     Site            order(96..97,100,104,108,111,116..117,119..120,131,134)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:275440"
     CDS             1..172
                     /gene="LOC107936093"
                     /coded_by="XM_016868745.2:256..774"
                     /db_xref="GeneID:107936093"
ORIGIN      
        1 mnthslklll illtitfpst qcdddlvdqi ckktpfydlc istlksnsng kdvkglasvm
       61 adtmlsnatd tlsyiraein rtpdpkiera laycaelyip vvkynlpqai dalskgqfef
      121 aadgisdaak eadscekmis wsqelaalsd rnklihslsd vavaivkill kg
//
LOCUS       XP_016724301             204 aa            linear   PLN 06-AUG-2024
DEFINITION  prostatic spermine-binding protein [Gossypium hirsutum].
ACCESSION   XP_016724301
VERSION     XP_016724301.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868812.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724301.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..204
                     /product="prostatic spermine-binding protein"
                     /calculated_mol_wt=22745
     CDS             1..204
                     /gene="LOC107936143"
                     /coded_by="XM_016868812.2:507..1121"
                     /db_xref="GeneID:107936143"
ORIGIN      
        1 mklmeeetvf eeeneikamk eeeevggede seveggepee eddddddedd egedgddddd
       61 ddegeedddv qvlhssgppv liaddeeged vkddddddeg dgdgdddddd dddddddsde
      121 deegeeeedm gteylvrpvv paedeedasd fepeengeee eededdeegs gkieappkrk
      181 rtdrddsddn dddggddder pskr
//
LOCUS       XP_016724225             664 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g48810 [Gossypium
            hirsutum].
ACCESSION   XP_016724225
VERSION     XP_016724225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868736.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="pentatricopeptide repeat-containing protein
                     At3g48810"
                     /calculated_mol_wt=74436
     Region          100..157
                     /region_name="PPR_3"
                     /note="Pentatricopeptide repeat domain; pfam13812"
                     /db_xref="CDD:316342"
     Region          118..142
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          146..194
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          150..177
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <183..>610
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          183..212
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          250..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          283..312
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          318..347
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          355..382
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          390..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          423..452
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          460..487
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          495..522
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          528..557
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          563..587
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          597..646
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          599..628
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..664
                     /gene="LOC107936085"
                     /coded_by="XM_016868736.2:147..2141"
                     /db_xref="GeneID:107936085"
ORIGIN      
        1 mylregrsll lkvkkpsipf vlntnpvstp mkepqsdqtq sqieesqvld alkqepnisl
       61 alnyfksian snsfkhtllt yqcmirklai epeidgiqyl lqqmkldgis csedlfvili
      121 dcyhqkglge qalkmfyrvk efgceptvri ynrvldalls enrlsmigpv ygnmkrdglv
      181 pdlhtynill kalcmndkid sacmlldema svgyspdams yativssmck lgkveearel
      241 vmrfrsyvsv ynalisgyca eyklkeafgv ledmlvegle pdvrsysmii sslsstgnie
      301 lslavfakmf vrgcspniyt fsslikgylm egrvheafdl wnrmvregie tnmvffntvi
      361 hglcsngkvg ealsvsyqme englspnvvs ytslingfak vgdligaset wnrmmangch
      421 pnvvaytsmv dvlcrhnmfd rahfliekmv lencapntvt fnafikglcs ngqvdwaika
      481 leemrhygca pnivtynell dglfkadrle dvfglireie ekgiewnlvt yntilsgfch
      541 agkleealql lgkmvargik pdaityniii ftycrqgkvk tavrildcvr asgdwhpdvv
      601 sytsliwglc nwvgieeaic ylnkminegi cpnvatwhvf vqclfnslgh lgpirvlddi
      661 lgng
//
LOCUS       XP_016724247             356 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At5g49610 [Gossypium hirsutum].
ACCESSION   XP_016724247
VERSION     XP_016724247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868758.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..356
                     /product="F-box protein At5g49610"
                     /calculated_mol_wt=40709
     Region          2..40
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(4,8,11..12,15..16,20,22..23,27..29,31)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          94..320
                     /region_name="F_box_assoc_1"
                     /note="F-box protein interaction domain; TIGR01640"
                     /db_xref="CDD:273726"
     CDS             1..356
                     /gene="LOC107936100"
                     /coded_by="XM_016868758.2:120..1190"
                     /db_xref="GeneID:107936100"
ORIGIN      
        1 msffpdevii evlarlpikp lfktrtvckl whglpsdkyf vklynqvsdk npmvlvevhd
       61 stkpnsslic vdnstgvsef sldflrdkvn irascngllc cssiavkgvy yvcnpmtref
      121 kvlpkikdqn ltrfypdsea tlvglacdps rgkfdvvlag yqcagssrrp dktfaclifd
      181 sdsnkwrkfv ssqeeifthm nrnqvvyvns alhwltgsgs yilvldlnfe vwrkvsvpde
      241 trygtgnrvy llesdrclsl ieisdtwmki wvmkdyerel whmvdrvslg cikglvhgif
      301 piaqtgecvf lathkqvlvy hrtswawkem ysvqnnatlp lwfsahafrt sifpce
//
LOCUS       XP_016724233             470 aa            linear   PLN 06-AUG-2024
DEFINITION  protein AGENET DOMAIN (AGD)-CONTAINING P1 [Gossypium hirsutum].
ACCESSION   XP_016724233
VERSION     XP_016724233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868744.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="protein AGENET DOMAIN (AGD)-CONTAINING P1"
                     /calculated_mol_wt=54665
     Region          14..70
                     /region_name="Agenet"
                     /note="Agenet domain; pfam05641"
                     /db_xref="CDD:461700"
     Region          79..129
                     /region_name="Tudor_Agenet_AtDUF_rpt2_4"
                     /note="second and fourth Tudor-like Agenet domains found
                     in the family of Arabidopsis thaliana DUF724
                     domain-containing proteins (AtDUFs); cd20406"
                     /db_xref="CDD:410477"
     Site            order(88..89,92)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410477"
     Region          177..236
                     /region_name="Agenet"
                     /note="Agenet domain; pfam05641"
                     /db_xref="CDD:461700"
     Region          246..292
                     /region_name="Tudor_Agenet_AtDUF_rpt2_4"
                     /note="second and fourth Tudor-like Agenet domains found
                     in the family of Arabidopsis thaliana DUF724
                     domain-containing proteins (AtDUFs); cd20406"
                     /db_xref="CDD:410477"
     Site            order(255..256,259)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410477"
     Region          337..397
                     /region_name="Agenet"
                     /note="Agenet domain; pfam05641"
                     /db_xref="CDD:461700"
     Region          407..453
                     /region_name="Tudor_Agenet_AtDUF_rpt2_4"
                     /note="second and fourth Tudor-like Agenet domains found
                     in the family of Arabidopsis thaliana DUF724
                     domain-containing proteins (AtDUFs); cd20406"
                     /db_xref="CDD:410477"
     Site            order(416..417,420)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410477"
     CDS             1..470
                     /gene="LOC107936092"
                     /coded_by="XM_016868744.2:163..1575"
                     /db_xref="GeneID:107936092"
ORIGIN      
        1 mkirrqsqgp lskgdqievk rpngayyaat vlrppsamqi nmvfveyhae dgskcvrgyv
       61 dlthvrpspp lelnrcfkig davdayweng whqgvvrdll kdskyvvgfh gnegkveeks
      121 eihqcnlrlh rewddgswvp smaelanssn enddkprnvk lkivfrkkqa daefrkgdev
      181 eitsdeegfr gswynavive yrgndkylve ystsrkedgv plraeakaqh irpcppelsp
      241 vasfclrevv daryndgwwi gvisrvldgs kyavyfslpd eelefdhlkl rihqdwkngk
      301 wiiaseensr plvmnsnrll hkmdvnekrf rvkfpkgtrv evksdepgye gswysaiivd
      361 slgndkylve yltlktedlg aflreeayas yirprpqhar ctrryklfen vdawyndgww
      421 igqvikvltt wkyavyfqtt nevmefkhnd lrlhqewing kwiipskdti
//
LOCUS       XP_016724244             325 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin 2-beta-dioxygenase 2 [Gossypium hirsutum].
ACCESSION   XP_016724244
VERSION     XP_016724244.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868755.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="gibberellin 2-beta-dioxygenase 2"
                     /calculated_mol_wt=35671
     Region          13..325
                     /region_name="PLN02156"
                     /note="gibberellin 2-beta-dioxygenase"
                     /db_xref="CDD:177816"
     CDS             1..325
                     /gene="LOC107936098"
                     /coded_by="XM_016868755.2:103..1080"
                     /db_xref="GeneID:107936098"
ORIGIN      
        1 mvvappnpvr sekpepielp vidlsadrse vsklivkace qygffkavhh gvsddviaam
       61 eeeglgfftk pvcekqragp agpfgygiks igfngdsgev eylllhtnps sisqlshtis
      121 ddpkkfssav sgyieavkrl aceildlmae glgvhdpsll snmirdvdsd smfrlnrypp
      181 ssfhtpppph ratteigfge htdpqmltil rsndvgglqi cvaggtwvpv tpdptafcin
      241 vgdvlqamtn grfmsvrhra ltngfkyrms mayfgapppr awlsvppelv tphrpllyrp
      301 fnwaeykkas yslrlgdsrl qlflk
//
LOCUS       XP_016724276             654 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT4 [Gossypium hirsutum].
ACCESSION   XP_016724276
VERSION     XP_016724276.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724276.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..654
                     /product="YTH domain-containing protein ECT4"
                     /calculated_mol_wt=72109
     Region          330..472
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..654
                     /gene="LOC107936122"
                     /coded_by="XM_016868787.2:219..2183"
                     /db_xref="GeneID:107936122"
ORIGIN      
        1 myqegapefv idqgsmyypt gtsigyyftg fespveweeh qnifsadgad vqftgaqtet
       61 lpyvyytpsy gyaqspynpy npyissavmg dspfvgaqqy ysfppysnpv tptayvpvvi
      121 qpdgipnnst eflldtrasi asrpdgrgvk hnfasasaaf srnssksapn qtdsftrvsd
      181 gqskhsanrg nfpdssspaa artqqgrvas gsiqsignip ggklpshrnq lkmdlpagnt
      241 fsdyrssapg rgaldtlrpn isvgrvlnda hgypntlgeq nrgprtnrlk nqfmvkaytt
      301 kagnsdvegn iviytdqynk ddfpidyvda kffviksyse ddvhksikyn vwsstphgnk
      361 kldsafedaq riaagkprgc siflffsvna sgqfcgvaem igsvdfqkam dfwqqdkwsg
      421 sfpvkwhiik dvpnshfrhi ivennenkpv tnsrdtqeim fkqgvemlkv fknhtmktsl
      481 lddfmyyenr qrimqeekar llirsfqspv qastldaatk lkfelhlngn ekatkqsdpd
      541 mlkrtvpsss qqvsfgsdit narnmndnid qisveannda stlkiglltk npkqdeskps
      601 vdadavetvt vgsmpvkvng ftessgyltf gtlphnpktl qpkggtakkg snrg
//
LOCUS       XP_040942671             654 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT4 [Gossypium hirsutum].
ACCESSION   XP_040942671
VERSION     XP_040942671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086737.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..654
                     /product="YTH domain-containing protein ECT4"
                     /calculated_mol_wt=72109
     Region          330..472
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..654
                     /gene="LOC107936122"
                     /coded_by="XM_041086737.1:186..2150"
                     /db_xref="GeneID:107936122"
ORIGIN      
        1 myqegapefv idqgsmyypt gtsigyyftg fespveweeh qnifsadgad vqftgaqtet
       61 lpyvyytpsy gyaqspynpy npyissavmg dspfvgaqqy ysfppysnpv tptayvpvvi
      121 qpdgipnnst eflldtrasi asrpdgrgvk hnfasasaaf srnssksapn qtdsftrvsd
      181 gqskhsanrg nfpdssspaa artqqgrvas gsiqsignip ggklpshrnq lkmdlpagnt
      241 fsdyrssapg rgaldtlrpn isvgrvlnda hgypntlgeq nrgprtnrlk nqfmvkaytt
      301 kagnsdvegn iviytdqynk ddfpidyvda kffviksyse ddvhksikyn vwsstphgnk
      361 kldsafedaq riaagkprgc siflffsvna sgqfcgvaem igsvdfqkam dfwqqdkwsg
      421 sfpvkwhiik dvpnshfrhi ivennenkpv tnsrdtqeim fkqgvemlkv fknhtmktsl
      481 lddfmyyenr qrimqeekar llirsfqspv qastldaatk lkfelhlngn ekatkqsdpd
      541 mlkrtvpsss qqvsfgsdit narnmndnid qisveannda stlkiglltk npkqdeskps
      601 vdadavetvt vgsmpvkvng ftessgyltf gtlphnpktl qpkggtakkg snrg
//
LOCUS       XP_016724278             477 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016724278
VERSION     XP_016724278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..477
                     /product="probable receptor-like protein kinase At5g18500
                     isoform X1"
                     /calculated_mol_wt=53559
     Region          181..447
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(181..185,189,201,203,232,248..251,255,257,301,303,
                     305..306,308,319,322,339..342)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(181..185,189,201,203,232,248..251,255,301,303,
                     305..306,308,319)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(185,255,257,301,303,305,322,339..342)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(318..325,335..342)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..477
                     /gene="LOC107936124"
                     /coded_by="XM_016868789.2:337..1770"
                     /db_xref="GeneID:107936124"
ORIGIN      
        1 masdlnrtls rtyiglqlwv liviclavif lvilgvslwl sfrnksrran dmlpirqesy
       61 ilevikeisv dqfsannggl dalndklsdr gsekirfnvd nednrgqsns fnhlekdvkg
      121 pqlgeregtg avstyrptsh pltdpsplfg lpefshlgwg hwftlrdlql atnqfskdni
      181 igdggygvvy rgnlingtpv avkkllnnpg qadkdfrvev eaighvrhkn lvrllgycie
      241 gtqrmlvyey vnngnleqwl qgdmchkgyl twdarikill gtakalaylh eaiepkvvhr
      301 dikssnilid enfdakisdf glakllgdgk shiatrvmgt fgyvapeyan sgllneksdv
      361 ysfgvvllea itgrypvdyg rpqpevnmve wlkmmvqlrr fedvvdpnie trpqtsalkr
      421 allaalrcvd tdadkrpkms qvarmlesee ypvpredrrr qknlvvksda dpdstva
//
LOCUS       XP_016724279             477 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016724279
VERSION     XP_016724279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868790.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..477
                     /product="probable receptor-like protein kinase At5g18500
                     isoform X1"
                     /calculated_mol_wt=53559
     Region          181..447
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(181..185,189,201,203,232,248..251,255,257,301,303,
                     305..306,308,319,322,339..342)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(181..185,189,201,203,232,248..251,255,301,303,
                     305..306,308,319)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(185,255,257,301,303,305,322,339..342)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(318..325,335..342)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..477
                     /gene="LOC107936124"
                     /coded_by="XM_016868790.2:343..1776"
                     /db_xref="GeneID:107936124"
ORIGIN      
        1 masdlnrtls rtyiglqlwv liviclavif lvilgvslwl sfrnksrran dmlpirqesy
       61 ilevikeisv dqfsannggl dalndklsdr gsekirfnvd nednrgqsns fnhlekdvkg
      121 pqlgeregtg avstyrptsh pltdpsplfg lpefshlgwg hwftlrdlql atnqfskdni
      181 igdggygvvy rgnlingtpv avkkllnnpg qadkdfrvev eaighvrhkn lvrllgycie
      241 gtqrmlvyey vnngnleqwl qgdmchkgyl twdarikill gtakalaylh eaiepkvvhr
      301 dikssnilid enfdakisdf glakllgdgk shiatrvmgt fgyvapeyan sgllneksdv
      361 ysfgvvllea itgrypvdyg rpqpevnmve wlkmmvqlrr fedvvdpnie trpqtsalkr
      421 allaalrcvd tdadkrpkms qvarmlesee ypvpredrrr qknlvvksda dpdstva
//
LOCUS       XP_040942672             291 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At3g17420 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942672
VERSION     XP_040942672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086738.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..291
                     /product="probable receptor-like protein kinase At3g17420
                     isoform X2"
                     /calculated_mol_wt=33056
     Region          28..261
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..291
                     /gene="LOC107936124"
                     /coded_by="XM_041086738.1:927..1802"
                     /db_xref="GeneID:107936124"
ORIGIN      
        1 meprlpskss ltirmlqrsf flwgqadkdf rveveaighv rhknlvrllg yciegtqrml
       61 vyeyvnngnl eqwlqgdmch kgyltwdari killgtakal aylheaiepk vvhrdikssn
      121 ilidenfdak isdfglakll gdgkshiatr vmgtfgyvap eyansgllne ksdvysfgvv
      181 lleaitgryp vdygrpqpev nmvewlkmmv qlrrfedvvd pnietrpqts alkrallaal
      241 rcvdtdadkr pkmsqvarml eseeypvpre drrrqknlvv ksdadpdstv a
//
LOCUS       XP_040942673             378 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sugar phosphate/phosphate translocator At3g17430
            [Gossypium hirsutum].
ACCESSION   XP_040942673
VERSION     XP_040942673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086739.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..378
                     /product="probable sugar phosphate/phosphate translocator
                     At3g17430"
                     /calculated_mol_wt=41869
     Region          11..297
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; cl26744"
                     /db_xref="CDD:474852"
     CDS             1..378
                     /gene="LOC121213730"
                     /coded_by="XM_041086739.1:273..1409"
                     /db_xref="GeneID:121213730"
ORIGIN      
        1 minkahvlty fylliyills sgvilynkwv lspkyfnfpf pitltmihma fsgivaffli
       61 rvfkvvapvk mtfeiyatcv vpisaffass lwfgntaylh isvafiqmlk almpvatffm
      121 gvmcgtdkpr cdvflnmvlv svgvvvssyg eihfnivgtv yqvtgilaea lrlvltqvll
      181 qkkgltlnpi tslyyiapcs fvflfvpwcl lekpgmevsq iqfnfwiffs nalcalalnl
      241 siflvigrtg avtirvagvl kdwilialst vvfpestitg lniigyaial cgvvmynyik
      301 vkdgrtpqlp sdsiperltk dwklekkssd iftpnannda nggsnfngse lndeeaplls
      361 srisllgrql snsstqrv
//
LOCUS       XP_040942674             378 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sugar phosphate/phosphate translocator At3g17430
            [Gossypium hirsutum].
ACCESSION   XP_040942674
VERSION     XP_040942674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086740.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..378
                     /product="probable sugar phosphate/phosphate translocator
                     At3g17430"
                     /calculated_mol_wt=41869
     Region          11..297
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; cl26744"
                     /db_xref="CDD:474852"
     CDS             1..378
                     /gene="LOC121213730"
                     /coded_by="XM_041086740.1:336..1472"
                     /db_xref="GeneID:121213730"
ORIGIN      
        1 minkahvlty fylliyills sgvilynkwv lspkyfnfpf pitltmihma fsgivaffli
       61 rvfkvvapvk mtfeiyatcv vpisaffass lwfgntaylh isvafiqmlk almpvatffm
      121 gvmcgtdkpr cdvflnmvlv svgvvvssyg eihfnivgtv yqvtgilaea lrlvltqvll
      181 qkkgltlnpi tslyyiapcs fvflfvpwcl lekpgmevsq iqfnfwiffs nalcalalnl
      241 siflvigrtg avtirvagvl kdwilialst vvfpestitg lniigyaial cgvvmynyik
      301 vkdgrtpqlp sdsiperltk dwklekkssd iftpnannda nggsnfngse lndeeaplls
      361 srisllgrql snsstqrv
//
LOCUS       XP_040942675             369 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_040942675
VERSION     XP_040942675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086741.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="pyruvate dehydrogenase (acetyl-transferring)
                     kinase, mitochondrial"
                     /calculated_mol_wt=41768
     Region          28..189
                     /region_name="BCDHK_Adom3"
                     /note="Mitochondrial branched-chain alpha-ketoacid
                     dehydrogenase kinase; pfam10436"
                     /db_xref="CDD:463093"
     Region          193..359
                     /region_name="HATPase_PDK-like"
                     /note="Histidine kinase-like ATPase domain of pyruvate
                     dehydrogenase kinase, branched-chain alpha-ketoacid
                     dehydrogenase kinase and related domains; cd16929"
                     /db_xref="CDD:340406"
     Site            order(222,268,270,272..275,277..279,283,288..290,344,
                     346..350,353,357)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340406"
     Site            order(242,246..247,249..250,280,282,284,286..287,295,
                     322..329,345,347,351..352,354)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340406"
     Site            order(296,328)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340406"
     CDS             1..369
                     /gene="LOC121213731"
                     /coded_by="XM_041086741.1:329..1438"
                     /db_xref="GeneID:121213731"
ORIGIN      
        1 maakkasesf sktlieevhk wgcmkqtgvs lrymmefgsk ptqrnllisg qflhkelpir
       61 iarraieles lpyglsekpa vlkvrdwyld sfrdlrsfpe ikntnderef tqmikaikvr
      121 hnnvvpmmal gvqqlkkgmd pkivyedlde ihqfldrfym srigirmlig qhvelhnpnp
      181 plhcvgyiht kmspvevaqn asedarcicl reygsapevn iygdpkftfp yvpthlhlmv
      241 felvknslra vqerymdsdg vvppiriiva dgiedvtikv sdegggiprs glpkiftyly
      301 starnpldey sdlgtadtvt magygyglpi srlyaryfgg dlqiismegy gtdaylhlsr
      361 lgdsqeplp
//
LOCUS       XP_040942676              70 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942676
VERSION     XP_040942676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086742.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..70
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7971
     CDS             1..70
                     /gene="LOC121213732"
                     /coded_by="XM_041086742.1:474..686"
                     /db_xref="GeneID:121213732"
ORIGIN      
        1 maswkktiat pfrkactffn qqprdkksqt ehekhvmdlh gevmacayed vqvmwsildk
       61 skstacnikp
//
LOCUS       XP_040942677              96 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 6-like [Gossypium hirsutum].
ACCESSION   XP_040942677
VERSION     XP_040942677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086743.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..96
                     /product="sodium/hydrogen exchanger 6-like"
                     /calculated_mol_wt=10575
     CDS             1..96
                     /gene="LOC121213733"
                     /coded_by="XM_041086743.1:115..405"
                     /db_xref="GeneID:121213733"
ORIGIN      
        1 mgispeesgs pekeqqaagv gillqimmlv lsfvlghvlr rhkfyylpea gaslligliv
       61 gglanisnte tsirawfnfh eeffflfllp piilyp
//
LOCUS       XP_040942678             658 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040942678
VERSION     XP_040942678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086744.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..658
                     /product="pentatricopeptide repeat-containing protein
                     At3g24000, mitochondrial"
                     /calculated_mol_wt=73718
     Region          84..658
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          118..145
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          147..176
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          223..250
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          254..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          326..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          355..382
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          388..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          423..449
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          455..483
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          489..518
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..658
                     /gene="LOC121213734"
                     /coded_by="XM_041086744.1:478..2454"
                     /db_xref="GeneID:121213734"
ORIGIN      
        1 msfivskfkc kgitffsllh vthyssrfst aavasiepki ppdlsscivq dkdlllksln
       61 psgtglhvld lvdegsleph ptlyhlllkk ctflrkpklg kivhahisns hfrgdvviln
      121 tllnmyakcg clddarnlfd emsvkdmvtw ttlitaysqh drpldalllf pqmlslgffp
      181 neftlssllk asaalpdtpq iyfhgaqlhg fsfkcgfhsn vyvgsslldm yarcgcmdea
      241 hfvfdvlptk nevswnalia dharkgqldr alslflkmlr qdfqpthftf ssifgacast
      301 gsleqgkwvh ahviksggei iafmgntllh myaksgsiqd akmifdrlvk rdlvswnsml
      361 tayaqhglgk eavqcfqkml niglvpndit flclltacsr aglleegqyy fksmnrynie
      421 pgishyvtiv dllgraglln ealrfinemp iqptaavwga llgacrmhkn vemgsfaaer
      481 vfeldphdsg phvllsniya sgnrwrdaak vrklmkesgv kkepacswve iqntvhmfva
      541 sddshpqmga iykkweeisa rikeigyvpd tshvlfymde qerevklqyh seklalafal
      601 lnspdgstir ikknirvcgd chsafkfvsk vvgreiivrd tnrfhhfydg scscgnfw
//
LOCUS       XP_040942679            1173 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14Q isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942679
VERSION     XP_040942679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086745.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1173
                     /product="kinesin-like protein KIN-14Q isoform X1"
                     /calculated_mol_wt=130849
     Region          183..325
                     /region_name="Malectin"
                     /note="Malectin domain; pfam11721"
                     /db_xref="CDD:432024"
     Region          <375..>533
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          518..848
                     /region_name="KISc_C_terminal"
                     /note="Kinesin motor domain, KIFC2/KIFC3/ncd-like
                     carboxy-terminal kinesins; cd01366"
                     /db_xref="CDD:276817"
     Site            order(528,603,606,608..611,752)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276817"
     Site            order(799,802,805)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276817"
     Region          <857..1006
                     /region_name="cdk7"
                     /note="CDK-activating kinase assembly factor MAT1;
                     TIGR00570"
                     /db_xref="CDD:129661"
     CDS             1..1173
                     /gene="LOC121213735"
                     /coded_by="XM_041086745.1:172..3693"
                     /db_xref="GeneID:121213735"
ORIGIN      
        1 medsnnfhhl rtdpllltdv swqqntsfyt daamaspsen pslsdlvssp kqdsadvvdp
       61 rqsqspnvis tpirefdgrs mlgfsltspd lvicagspdi pskaygdspe flekhrcsie
      121 vslengiegs dnskakqksp tvkfstvcet fhkelspess fellplreta dysqhkhedy
      181 paisinagcl ngaveldgvi ysnddcfvgg dviiadrivg dgggnslynt arlgdfsynf
      241 ltlecgfyai dlhfaeivft tgppgirvfd vfvqeekvvt sldiygqvga nkplvisnir
      301 tfvdsgggll irfeglmgsp ivcgitvrkd slesfkeags eeimgmdkvg ghesprdisd
      361 ceievkyqil qmdyerqkke laemrsaleg lkrenklktk ecqeackslq elqnelmrks
      421 mhvgslafai egqvkeksrw fsslrdmtrk lkimkmerik lseevshykn cimdindfgt
      481 kiqsrinqqa dlhedlktky lkgakerkel ynkvlelkgn irvfcrcrpl nseeiaagas
      541 laidfesakd geltvisnga pkktfrfdav fgphaeqadv fqdtapfats vldgynvcif
      601 aygqtgtgkt ftmegtkear gvnfrtleel frvinerqkl yryeisvsal evyneqirdl
      661 lvsgsqqstm akrleirqvg egmhhvpglv eahvnnmnev wevlqtgsna ravgstnane
      721 hssrshcihc vmvkgenlln gectksklwl vdlagserva ktdvlgerlk etqninrsls
      781 algdvisala tksshipfrn sklthllqds lggdskalmf vqispnendl getlcslnfa
      841 srvrgielgp akkqmdtsel lrwkqmveks kqdmkikdlq irkmeetihg ldlkmkdkdl
      901 knknlqekvk elesqllier klarqhvdtr iaeqqqkqqn edvrpplatr llgtnkssne
      961 vkngtlmkeq vnltrplten sfrpsmplsv tdgsfkhidp vekennpeva eqlrlptrtg
     1021 rasmcptirr mpassaprrn sliplpstps saqlappfhp lpsqpdiiee vdefipeqtv
     1081 cnspkgtksg gkklssilrr slqkkvqlks pmqqhlrrgl nvgmervrvs igsrgrmasr
     1141 vlvgngrkgg keiqqkqnqk ekerawnigr tai
//
LOCUS       XP_040942680            1171 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14Q isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942680
VERSION     XP_040942680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086746.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1171
                     /product="kinesin-like protein KIN-14Q isoform X2"
                     /calculated_mol_wt=130621
     Region          183..325
                     /region_name="Malectin"
                     /note="Malectin domain; pfam11721"
                     /db_xref="CDD:432024"
     Region          <375..>533
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          518..848
                     /region_name="KISc_C_terminal"
                     /note="Kinesin motor domain, KIFC2/KIFC3/ncd-like
                     carboxy-terminal kinesins; cd01366"
                     /db_xref="CDD:276817"
     Site            order(528,603,606,608..611,752)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276817"
     Site            order(799,802,805)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276817"
     CDS             1..1171
                     /gene="LOC121213735"
                     /coded_by="XM_041086746.1:172..3687"
                     /db_xref="GeneID:121213735"
ORIGIN      
        1 medsnnfhhl rtdpllltdv swqqntsfyt daamaspsen pslsdlvssp kqdsadvvdp
       61 rqsqspnvis tpirefdgrs mlgfsltspd lvicagspdi pskaygdspe flekhrcsie
      121 vslengiegs dnskakqksp tvkfstvcet fhkelspess fellplreta dysqhkhedy
      181 paisinagcl ngaveldgvi ysnddcfvgg dviiadrivg dgggnslynt arlgdfsynf
      241 ltlecgfyai dlhfaeivft tgppgirvfd vfvqeekvvt sldiygqvga nkplvisnir
      301 tfvdsgggll irfeglmgsp ivcgitvrkd slesfkeags eeimgmdkvg ghesprdisd
      361 ceievkyqil qmdyerqkke laemrsaleg lkrenklktk ecqeackslq elqnelmrks
      421 mhvgslafai egqvkeksrw fsslrdmtrk lkimkmerik lseevshykn cimdindfgt
      481 kiqsrinqqa dlhedlktky lkgakerkel ynkvlelkgn irvfcrcrpl nseeiaagas
      541 laidfesakd geltvisnga pkktfrfdav fgphaeqadv fqdtapfats vldgynvcif
      601 aygqtgtgkt ftmegtkear gvnfrtleel frvinerqkl yryeisvsal evyneqirdl
      661 lvsgsqqstm akrleirqvg egmhhvpglv eahvnnmnev wevlqtgsna ravgstnane
      721 hssrshcihc vmvkgenlln gectksklwl vdlagserva ktdvlgerlk etqninrsls
      781 algdvisala tksshipfrn sklthllqds lggdskalmf vqispnendl getlcslnfa
      841 srvrgielgp akkqmdtsel lrwkqmkskq dmkikdlqir kmeetihgld lkmkdkdlkn
      901 knlqekvkel esqllierkl arqhvdtria eqqqkqqned vrpplatrll gtnkssnevk
      961 ngtlmkeqvn ltrpltensf rpsmplsvtd gsfkhidpve kennpevaeq lrlptrtgra
     1021 smcptirrmp assaprrnsl iplpstpssa qlappfhplp sqpdiieevd efipeqtvcn
     1081 spkgtksggk klssilrrsl qkkvqlkspm qqhlrrglnv gmervrvsig srgrmasrvl
     1141 vgngrkggke iqqkqnqkek erawnigrta i
//
LOCUS       XP_040942681            1168 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14Q isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942681
VERSION     XP_040942681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086747.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1168
                     /product="kinesin-like protein KIN-14Q isoform X3"
                     /calculated_mol_wt=130278
     Region          183..325
                     /region_name="Malectin"
                     /note="Malectin domain; pfam11721"
                     /db_xref="CDD:432024"
     Region          <375..>533
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          518..848
                     /region_name="KISc_C_terminal"
                     /note="Kinesin motor domain, KIFC2/KIFC3/ncd-like
                     carboxy-terminal kinesins; cd01366"
                     /db_xref="CDD:276817"
     Site            order(528,603,606,608..611,752)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276817"
     Site            order(799,802,805)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276817"
     CDS             1..1168
                     /gene="LOC121213735"
                     /coded_by="XM_041086747.1:172..3678"
                     /db_xref="GeneID:121213735"
ORIGIN      
        1 medsnnfhhl rtdpllltdv swqqntsfyt daamaspsen pslsdlvssp kqdsadvvdp
       61 rqsqspnvis tpirefdgrs mlgfsltspd lvicagspdi pskaygdspe flekhrcsie
      121 vslengiegs dnskakqksp tvkfstvcet fhkelspess fellplreta dysqhkhedy
      181 paisinagcl ngaveldgvi ysnddcfvgg dviiadrivg dgggnslynt arlgdfsynf
      241 ltlecgfyai dlhfaeivft tgppgirvfd vfvqeekvvt sldiygqvga nkplvisnir
      301 tfvdsgggll irfeglmgsp ivcgitvrkd slesfkeags eeimgmdkvg ghesprdisd
      361 ceievkyqil qmdyerqkke laemrsaleg lkrenklktk ecqeackslq elqnelmrks
      421 mhvgslafai egqvkeksrw fsslrdmtrk lkimkmerik lseevshykn cimdindfgt
      481 kiqsrinqqa dlhedlktky lkgakerkel ynkvlelkgn irvfcrcrpl nseeiaagas
      541 laidfesakd geltvisnga pkktfrfdav fgphaeqadv fqdtapfats vldgynvcif
      601 aygqtgtgkt ftmegtkear gvnfrtleel frvinerqkl yryeisvsal evyneqirdl
      661 lvsgsqqstm akrleirqvg egmhhvpglv eahvnnmnev wevlqtgsna ravgstnane
      721 hssrshcihc vmvkgenlln gectksklwl vdlagserva ktdvlgerlk etqninrsls
      781 algdvisala tksshipfrn sklthllqds lggdskalmf vqispnendl getlcslnfa
      841 srvrgielgp akkqmdtsel lrwkqmqdmk ikdlqirkme etihgldlkm kdkdlknknl
      901 qekvkelesq llierklarq hvdtriaeqq qkqqnedvrp platrllgtn kssnevkngt
      961 lmkeqvnltr pltensfrps mplsvtdgsf khidpveken npevaeqlrl ptrtgrasmc
     1021 ptirrmpass aprrnslipl pstpssaqla ppfhplpsqp diieevdefi peqtvcnspk
     1081 gtksggkkls silrrslqkk vqlkspmqqh lrrglnvgme rvrvsigsrg rmasrvlvgn
     1141 grkggkeiqq kqnqkekera wnigrtai
//
LOCUS       XP_040942682             435 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase WAG1 [Gossypium hirsutum].
ACCESSION   XP_040942682
VERSION     XP_040942682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086748.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..435
                     /product="serine/threonine-protein kinase WAG1"
                     /calculated_mol_wt=48400
     Region          78..404
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(86..90,94,108,110,141,157..158,160,164,166,205,207,
                     209..210,212,222..223,226,282..287,314,320,323)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(86..90,94,108,110,141,158..160,164,205,207,209..210,
                     212,222..223)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(90,164,166,205,207,209,226,282..287,314,320,323)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(222..232,279..287)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     CDS             1..435
                     /gene="LOC121213736"
                     /coded_by="XM_041086748.1:171..1478"
                     /db_xref="GeneID:121213736"
ORIGIN      
        1 mvdeepyfpd tdtdlsftsa itdttlssss rsssasstls lsfkephlss ptihhrkwdp
       61 rfspiklvtt ddgnlqlhhl klirhlgtgn larvflcqlk dhdgaffalk vidtealtae
      121 klshvqtegq ilsmvnhpfl prlyahiqas hytcflidfc pngdlfsllr kqpgnrfslp
      181 avrffaaevl valeylhalg ivyrdlkpen vllredghim ltdfdlcfva dvvpafkfvr
      241 rrsgkpnrnr lsggcfgpaa glndkgevvp vaepvtafsr scvgtheyla pevvsgdghg
      301 ngvdwwafgv fvyellygtt pfkgasneit lrniasssrq mrfahapgve eagiseakdl
      361 iekllvkdps rrlgctngaq dikrhpffdg inlplirqyk ppevvggaar ergqvdrvkr
      421 rrwlrkglnc mmmrn
//
LOCUS       XP_040942683             554 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942683
VERSION     XP_040942683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086749.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..554
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=63424
     Region          78..>167
                     /region_name="DUF4203"
                     /note="Domain of unknown function (DUF4203); pfam13886"
                     /db_xref="CDD:464018"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          385..481
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..554
                     /gene="LOC121213737"
                     /coded_by="XM_041086749.1:706..2370"
                     /db_xref="GeneID:121213737"
ORIGIN      
        1 mediglfkqg fkwlesqkhv yskaktavty crdkmgllme rhwpmvcsgc vgfckflklv
       61 lvywidclvr gfqscsrlgs asllvimwsc flsltsmscl lyvllsmgaa gaavqylgyt
      121 pglfivglfg ilvlwmyanf witgtlfivg gylfslshar fivliatvys vycvkiqvgw
      181 igvflsinla flsndvadyl lkcfdnvnen mhfeeqkepk pvmeddlpgq ceysipsdep
      241 qkvyscksss tsattsvinq kefsakrvvk edtsstdemk rilnstdhye algfprhiki
      301 dsgilkkeyr kkamlvhpdk nmgsplases fkklqcayev lsdstkkkdy deqlrkeesk
      361 trsvcqkshs strqqatsdh rseesrriqc tkcgnshiwv ctnrnkakar wcqdccqyhq
      421 akdgdgwvey kgslvfdrpq kaeiprafvc aeskifdvse waicqrmacr pnthrpsfhv
      481 nmvglektqr skssrypwdl daemidedee efelwlqqal asglfcetsk rrkswspfkl
      541 pqkkskkqwr rsst
//
LOCUS       XP_040942684             553 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942684
VERSION     XP_040942684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086750.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..553
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=63296
     Region          78..>167
                     /region_name="DUF4203"
                     /note="Domain of unknown function (DUF4203); pfam13886"
                     /db_xref="CDD:464018"
     Region          287..351
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(317..319,328,331..332,335..336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          384..480
                     /region_name="Jiv90"
                     /note="Cleavage inducing molecular chaperone; pfam14901"
                     /db_xref="CDD:464360"
     CDS             1..553
                     /gene="LOC121213737"
                     /coded_by="XM_041086750.1:708..2369"
                     /db_xref="GeneID:121213737"
ORIGIN      
        1 mediglfkqg fkwlesqkhv yskaktavty crdkmgllme rhwpmvcsgc vgfckflklv
       61 lvywidclvr gfqscsrlgs asllvimwsc flsltsmscl lyvllsmgaa gaavqylgyt
      121 pglfivglfg ilvlwmyanf witgtlfivg gylfslshar fivliatvys vycvkiqvgw
      181 igvflsinla flsndvadyl lkcfdnvnen mhfeeqkepk pvmeddlpgq ceysipsdep
      241 qkvyscksss tsattsvinq kefsakrvvk edtsstdemk rilnstdhye algfprhiki
      301 dsgilkkeyr kkamlvhpdk nmgsplases fkklqcayev lsdstkkkdy deqlrkeesk
      361 trsvcqkshs strqatsdhr seesrriqct kcgnshiwvc tnrnkakarw cqdccqyhqa
      421 kdgdgwveyk gslvfdrpqk aeiprafvca eskifdvsew aicqrmacrp nthrpsfhvn
      481 mvglektqrs kssrypwdld aemidedeee felwlqqala sglfcetskr rkswspfklp
      541 qkkskkqwrr sst
//
LOCUS       XP_040942685             392 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942685
VERSION     XP_040942685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086751.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..392
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=43892
     Region          52..319
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,128,172,174,
                     176..177,179,190,193,210..213)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(56,126,128,172,174,176,193,210..213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(189..196,206..213)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..392
                     /gene="LOC121213738"
                     /coded_by="XM_041086751.1:766..1944"
                     /db_xref="GeneID:121213738"
ORIGIN      
        1 mtcfsflfrr rndsvnnqtf evdeefdvqn vkfysykelr tatedfspvn kigeggfgsv
       61 ykgrlkngni aaikvlsaes rqgvrefvte ikviseiehe nlvklygccv ednhrilvyn
      121 ylennslsqt llgsghsniq fnwrtrskic igiarglafl heevrpyivh rdikasnill
      181 dkdltpkisd fglaklipan lthvstrvag tigylapeya irgqltrkad iygfgvllie
      241 ivtgrcntnt rlpvgeqyll ertwdlyekr elvglvdell ngdfdaeeac rylkigllct
      301 qdapklrpsm ssvvkmltgq kmvderkitk pglisdfmdl kvrssdktkp gqkntsynaf
      361 sgsdkgnsti ssgtstsant tfntmnnddr sv
//
LOCUS       XP_040942686             392 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942686
VERSION     XP_040942686.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086752.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..392
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=43892
     Region          52..319
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,128,172,174,
                     176..177,179,190,193,210..213)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(56,126,128,172,174,176,193,210..213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(189..196,206..213)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..392
                     /gene="LOC121213738"
                     /coded_by="XM_041086752.1:521..1699"
                     /db_xref="GeneID:121213738"
ORIGIN      
        1 mtcfsflfrr rndsvnnqtf evdeefdvqn vkfysykelr tatedfspvn kigeggfgsv
       61 ykgrlkngni aaikvlsaes rqgvrefvte ikviseiehe nlvklygccv ednhrilvyn
      121 ylennslsqt llgsghsniq fnwrtrskic igiarglafl heevrpyivh rdikasnill
      181 dkdltpkisd fglaklipan lthvstrvag tigylapeya irgqltrkad iygfgvllie
      241 ivtgrcntnt rlpvgeqyll ertwdlyekr elvglvdell ngdfdaeeac rylkigllct
      301 qdapklrpsm ssvvkmltgq kmvderkitk pglisdfmdl kvrssdktkp gqkntsynaf
      361 sgsdkgnsti ssgtstsant tfntmnnddr sv
//
LOCUS       XP_040942687             392 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-responsive protein kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040942687
VERSION     XP_040942687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086753.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..392
                     /product="cold-responsive protein kinase 1"
                     /calculated_mol_wt=43892
     Region          52..319
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,128,172,174,
                     176..177,179,190,193,210..213)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(56,126,128,172,174,176,193,210..213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(189..196,206..213)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..392
                     /gene="LOC121213738"
                     /coded_by="XM_041086753.1:425..1603"
                     /db_xref="GeneID:121213738"
ORIGIN      
        1 mtcfsflfrr rndsvnnqtf evdeefdvqn vkfysykelr tatedfspvn kigeggfgsv
       61 ykgrlkngni aaikvlsaes rqgvrefvte ikviseiehe nlvklygccv ednhrilvyn
      121 ylennslsqt llgsghsniq fnwrtrskic igiarglafl heevrpyivh rdikasnill
      181 dkdltpkisd fglaklipan lthvstrvag tigylapeya irgqltrkad iygfgvllie
      241 ivtgrcntnt rlpvgeqyll ertwdlyekr elvglvdell ngdfdaeeac rylkigllct
      301 qdapklrpsm ssvvkmltgq kmvderkitk pglisdfmdl kvrssdktkp gqkntsynaf
      361 sgsdkgnsti ssgtstsant tfntmnnddr sv
//
LOCUS       XP_040942688             420 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein recA homolog 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040942688
VERSION     XP_040942688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086754.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..420
                     /product="DNA repair protein recA homolog 1,
                     chloroplastic"
                     /calculated_mol_wt=45774
     Region          69..392
                     /region_name="recA"
                     /note="recombinase A; Provisional; PRK09354"
                     /db_xref="CDD:236476"
     CDS             1..420
                     /gene="LOC121213739"
                     /coded_by="XM_041086754.1:208..1470"
                     /db_xref="GeneID:121213739"
ORIGIN      
        1 mdsslvfsle lklhhhslpf pthfqrrpfl tssnfhlaaa kkpprkvhce fepkvngals
       61 qdpdsrfldr qkaleaamnd inssfgkgsv trlgsaggal vetfpsgclt ldlalggglp
      121 kgrivevygp essgkttlal haiaevqklg gnamlvdaeh afdpayskal gvdvenlivc
      181 qpdngemale iadrmcrsga vdlicvdsvs altpraeieg eigmqqmglq arlmsqalrk
      241 msgnaskagc tliflnqiry kigvyygnpe vtsggialkf fasvrleirs tgkiksvkgd
      301 ediglrvrvr vqkskvsrpy kqaefeiifg egvsklgcil dcaemmdvvt kkgswysygd
      361 hrlgqgrdra lqylrdnpil rdeiekiars miadgtehls sthvkslsfp pqdediyeev
//
LOCUS       XP_040942689             143 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem II 10 kDa polypeptide, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040942689
VERSION     XP_040942689.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086755.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..143
                     /product="photosystem II 10 kDa polypeptide,
                     chloroplastic"
                     /calculated_mol_wt=14533
     Region          27..143
                     /region_name="PLN00053"
                     /note="photosystem II subunit R; Provisional"
                     /db_xref="CDD:215041"
     CDS             1..143
                     /gene="LOC121213740"
                     /coded_by="XM_041086755.1:56..487"
                     /db_xref="GeneID:121213740"
ORIGIN      
        1 maasvmasss svrlkpnfnv dksggsrgvp slarvpssfk veagsgkkki ktdspyging
       61 glnlkdgvda sgrrakgkgv yqfvdkygan vdgyspiydp ndwspsgdvy tggttglaiw
      121 avtlagilag gallvyntsa laq
//
LOCUS       XP_040942690             314 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 21/22 [Gossypium hirsutum].
ACCESSION   XP_040942690
VERSION     XP_040942690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086756.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="NAC domain-containing protein 21/22"
                     /calculated_mol_wt=34989
     Region          12..135
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..314
                     /gene="LOC121213742"
                     /coded_by="XM_041086756.1:214..1158"
                     /db_xref="GeneID:121213742"
ORIGIN      
        1 msnislveak lppgfrfhpk deelvcdylm kkvasadtlq lmievdlnkc epwdipetag
       61 vggkewyfys krdrkyatgl rtnratcsgy wkatgkdrai hskgmvvgmr ktlvfyngra
      121 pkgtksdwvm hefrldgpls ppnlatlked wvlcrvfhkt rdtitkpssm gttclddtss
      181 ssqlppltdp ylisdhtgpn sneqvpcfsv lsqtdpnsfk vemqpnmpte tltssssvdh
      241 qqqqqqmmpa inditsclds fpgdkmvika vlnnltqldt ylnvkestsf dggissdhsy
      301 lsgiwdcptf giny
//
LOCUS       XP_040942691             416 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription activator MSS11 [Gossypium hirsutum].
ACCESSION   XP_040942691
VERSION     XP_040942691.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086757.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..416
                     /product="transcription activator MSS11"
                     /calculated_mol_wt=45246
     CDS             1..416
                     /gene="LOC121213743"
                     /coded_by="XM_041086757.1:191..1441"
                     /db_xref="GeneID:121213743"
ORIGIN      
        1 masacvnnig vspesfqpkt sypsfgwlsp risfsreees ssksksktdp dtteiqdvpp
       61 gefefrledp vamlpadelf sdgklvplhl stvkqlqqqq qqrqeqeqhr alnglaeirs
      121 retgssmevs gsdhylfspk aprcssrwre llgfkkcsls tnnqpskpes qsskvsllsn
      181 nnpkslkhfl hrssksssds slnlpllkss dsesvsisss rlslsssssg hehddlprls
      241 ldsdkpspnp fapcrninpn pnpprmrmvk prpgsgsdqt stggarmgrs pirrepmtsr
      301 gvsvdsprmn ssgkivfqsl ersssspssf nggprfkqrg mersysanvr itpvlnvpvc
      361 slrgssksgs vfgfgqlfss spqknpngsl sssssaassk ghqiscnrnr ttdrnh
//
LOCUS       XP_040942692             733 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g71490 [Gossypium
            hirsutum].
ACCESSION   XP_040942692
VERSION     XP_040942692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086758.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..733
                     /product="pentatricopeptide repeat-containing protein
                     At1g71490"
                     /calculated_mol_wt=82246
     Region          <76..>246
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          170..717
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          170..196
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          239..266
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..297
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          303..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          338..402
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          406..433
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          439..504
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          508..535
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          541..570
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          577..606
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..733
                     /gene="LOC121213744"
                     /coded_by="XM_041086758.1:333..2534"
                     /db_xref="GeneID:121213744"
ORIGIN      
        1 mpsassrvvl qglsisriqk fipkkwkqsv kpvdiqsnql sessdyrgne lktiftddts
       61 mlenlvislk efvtrghilk afksysliql hvsstaydvi lhpissllvs ctnlklllpg
      121 kqlhaqiisl gleqhpllvp klvtfytkfn llddarvvte nckilhplpw tllissfvkn
      181 ehfkealsay tkmlnrgiip dnftypsvlk acgeeldvdf grmvhssita schdwnlyvh
      241 nalismygkf gkvdvardlf nkmlerddvs wntmigcyas kgmwqeafel fdcmhaegie
      301 pnfitwntia ggclrtrnfk rslellsqmk sngfhldqvs miiglgacsh igalklgkei
      361 hgsairsccn efenvrnami tmysrckdle hayilfqsik ersiitwnsm lsgytymdks
      421 eeasflfqem llsgvepnyv tiasilplca rvanlqhgke fhcyitrrkv fedclllwna
      481 lvsmyarsgk lvaakhvfdl mqkrdevtyt sliagygmqg eghiaiklfe emislqikpd
      541 hltmvavlsa cshsglvieg qfwfekmqsf yglvprlehf scmvdlygra gllnkakeif
      601 trmpykataa mwgtllgacr ihgntdigew aaenllelrp dhsgyyvlia nmyaaagcwn
      661 klakvrtlmr dsgvtkspgc awvdvgsvfs pfvvgdtsnp yapeiyqald gltelmkdas
      721 yvsdgevlle gtg
//
LOCUS       XP_040942693             824 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040942693
VERSION     XP_040942693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086759.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..824
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=92624
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..149)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..175
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          207..316
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          333..422
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(363,365,379)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          513..783
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(513..517,521,533,535,564,580..583,587,589,632,634,
                     636..637,639,650,653,671..674)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(513..517,521,533,535,564,580..583,587,632,634,
                     636..637,639,650)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(517,587,589,632,634,636,653,671..674)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(649..656,667..674)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..824
                     /gene="LOC121213745"
                     /coded_by="XM_041086759.1:70..2544"
                     /db_xref="GeneID:121213745"
ORIGIN      
        1 mgktiscsvl ltliscfslq fgtaldtitp sksikdpesi isqsgvfrlg ffsfanssnr
       61 yvgilynqip vqtvvwvanr nkplkdssgi lnisddgnlv flngkaeilw ssnvtnlvpn
      121 attaqllnsg nlvlnngggs slwesfqdps nafietmeig tdvkkgrkve lkswksiddp
      181 sdgnfsfaie pfnipegiir knnklyfrtg pwngniflgv iltgyldgfy maadnqqqty
      241 yltykfsnns msmyyelnsq gkfverqwda gkgdwinryp ilqtdcddyg kcgpfgicds
      301 tkrpicsclk gfkprniegw skgnwssgcl rttplqcqrd snngsetgqg ddgflklkmm
      361 kvpafpdrss linrdckdqc lkncscvaya yddgigcmfw ggdlidvqkf strgvdlyir
      421 lpsseldkgk skkvivftta iagiviitis alflwcrmak qrgrnkiwkq iklqfysenv
      481 eenligvklq qlplfkfeel atatdnfhrt kklgqggfgp vyrgtlddgk eiavkrlska
      541 sgqgleefkn evvvisklqh rnlvrlfgcc vegeekmlvy eympntslda flfdpskldv
      601 ldwrkrfnii egisrgllyl hrdsrlkiih rdlkasnill deelnpkisd fgmarifgan
      661 enqantkriv gtygymspey amqgqfseks dvfsfgvlll eivsgkknts fynneydlsl
      721 lgyawklwne gniwdivdkv isefesdskn ekeirrcihv gllcvqeyak drpnmstivs
      781 ilnseisnln tpkqpaftqt plithdvgnk vslndvtltk fdgr
//
LOCUS       XP_040942694             230 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040942694
VERSION     XP_040942694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086760.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=25742
     Region          <1..64
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(5,7,21)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          <109..>171
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     Region          149..>230
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..230
                     /gene="LOC121213746"
                     /coded_by="XM_041086760.1:103..795"
                     /db_xref="GeneID:121213746"
ORIGIN      
        1 mmkvpafpdw ssgiyseckd qclkncscva yahddgigcm fwgrdlidvq kfstsgvdly
       61 irlpsseldk gksnkvivit tvitgivvit isalflwcrm akqrgrnkir rqiedeeenl
      121 igaklqqlpl fnfeelatat dnfhhtkklg qggfgpvyrg tlddgkeiav krlskasgqg
      181 leefknevvv isklqhrnlv klfgccvege ekmlvyeymp nksldsflfg
//
LOCUS       XP_040942695             160 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            SD1-13 [Gossypium hirsutum].
ACCESSION   XP_040942695
VERSION     XP_040942695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086761.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD1-13"
                     /calculated_mol_wt=18100
     Region          <9..119
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..160
                     /gene="LOC121213747"
                     /coded_by="XM_041086761.1:109..591"
                     /db_xref="GeneID:121213747"
ORIGIN      
        1 mlfltlkfsg ymspeyamqg qfseksdvfs fgvllleivs grrntsfynn qyalnllgya
       61 wklwnegdiw glvdqvilel esdsknerei krcihvgllc vqeyakdrlt mstvvsilns
      121 eisnldtpkq saftqtplit hdvenkvsln dvtltsfdgr
//
LOCUS       XP_040942696             157 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11303 [Gossypium hirsutum].
ACCESSION   XP_040942696
VERSION     XP_040942696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086762.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11303"
                     /calculated_mol_wt=16845
     Site            order(32..33,35,38,65,75..76,110,112,121,123,125,127..136,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..>155
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     CDS             1..157
                     /gene="LOC121213748"
                     /coded_by="XM_041086762.1:104..577"
                     /db_xref="GeneID:121213748"
ORIGIN      
        1 mgktiscsvl laliscfyll fstaldtitp sksikdpefv isqngvfqlg ffslanssnr
       61 yvgilhnqip vqtvvwvanr nrplkdssgi lnisddgnlv vsngkaevlw sshvtntapn
      121 attaqildsg nlvlnngedg arslwesfkd psnafkl
//
LOCUS       XP_016678351             846 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-galactosidase 1 [Gossypium hirsutum].
ACCESSION   XP_016678351
VERSION     XP_016678351.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016822862.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016678351.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..846
                     /product="beta-galactosidase 1"
                     /calculated_mol_wt=93560
     Region          24..846
                     /region_name="PLN03059"
                     /note="beta-galactosidase; Provisional"
                     /db_xref="CDD:166698"
     CDS             1..846
                     /gene="LOC107897410"
                     /coded_by="XM_016822862.2:655..3195"
                     /db_xref="GeneID:107897410"
ORIGIN      
        1 mamvlnsklp vvlnallvvl laisgvclvs gsvsydhkai tingqrrill sgsihyprst
       61 pemwpdliqk akeggldviq tyvfwnghep apgkyyfqgn ydlvkfiklv qqaglyvhlr
      121 igpyvcaewn fggfpvwlky ipgiifrtnn gpfkaqmqrf tkkivdmmka erlyesqggp
      181 iilsqieney gpmeyelgap gkaysywsak malglatgvp wvmckqddap dpiintcngf
      241 ycdyfspnka nkpkmwteaw tgwytefgga vpyrpaedla fsvarfiqkg gsfvnyymyh
      301 ggtnfgrtag gpfiatsydy dapldeyglk rqpkwghlkd lhraiklcep alvygdptmi
      361 rlgnyqeahv fkykaggcaa flanynsrdy atvsfrnnhy nlppwsisil pdckntvynt
      421 arigaqiark kmvpvpmhgg lswqayneet asdadssftm aglleqintt rdatdylwyt
      481 tevkidsreg flrngkspvl tvlsaghalh vfvngqlsgs sygslefpkl tfsqgvnlra
      541 ginkisllsi avglpnvgph fetwnagvlg pvtlnglneg rrdlswqkws ykiglkgeal
      601 nllslsgsss vewaqrsfvs qrqpltwykt tfnapagnsp laldmgsmgk gqiwingksi
      661 grhwpaykas gncgicsyag tfnekkcgtn cggasqrwyh vprswlnptg nllvvfeewg
      721 gdpngitlvr retdsvcadi yewqpnlmny lmkasgkvnk plrpkvhlec dagqkisavk
      781 fasfgtpggv cgsyregsch ahhsydaftr lcvgqnfctv tvapemfggd pcpnvmkkls
      841 vevics
//
LOCUS       XP_040942697             828 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942697
VERSION     XP_040942697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086763.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..828
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X1"
                     /calculated_mol_wt=92972
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..136,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..319
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..426
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(365,367,381)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          517..787
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(517..521,525,537,539,568,584..587,591,593,636,638,
                     640..641,643,654,657,675..678)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(517..521,525,537,539,568,584..587,591,636,638,
                     640..641,643,654)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(521,591,593,636,638,640,657,675..678)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(653..660,671..678)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..828
                     /gene="LOC121213749"
                     /coded_by="XM_041086763.1:138..2624"
                     /db_xref="GeneID:121213749"
ORIGIN      
        1 mgktiscsvl laliscfyll fataldtitp skpikdpdvi isqkglfrlg ffslvnssnr
       61 yvgilyhqip iqtvvwvanr nrplkdssgi ltisddgnlv vsngkaeilw stnvnntapn
      121 attaqlldsg nlvlsngedg asslwesfed psnafietmk istdvkmgrk velkswksid
      181 dpsdgnfsls lepfnspegi irknnqlyyr tgpwngntfi glidkyaayl egfyvadnpq
      241 qpyymtyefs ndsmliysel dsqgkfiewk wdegkgnwin kfssyqtncd vygycgafgi
      301 cdsskrtics clkgfkprni eewsrgnwss gcsrttllhc qrdnngsgas qgddwflemk
      361 mmkvpafphl ssisngqckd qcmnmkncsc vayayddgig cmlwsgdlid vqkfsasgvd
      421 lyirlpssel dkeksskviv ittvtagivv itisalflwc gmakqrgtnk rhkqikhksy
      481 senvreslig vklqqlplfn feelatatnn fhpekrlgqg gfgpvykgtl ddgkeiavkr
      541 lskasgqgle efmnevvvis klqhrnlvrl lgccveaeek ilvyefmpnk sldaflfdpi
      601 rqrlldwrkr fniiegisrg llylhrdsrl kiihrdlkas nvlldqdlnp kisdfgmari
      661 fggdenqant krvvgtygym speyamqgqf seksdvfsyg vllleivsgr rntsfynnkd
      721 dlsllgyawk lwregniwgl vdnvilesks ysnnekeiwr cihvgllcvq eytkdrptis
      781 tvismlnsei sdlntpkqpa ftqaplmshd vedrgslngv tltnldgr
//
LOCUS       XP_040942698             828 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942698
VERSION     XP_040942698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086764.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..828
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X1"
                     /calculated_mol_wt=92972
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..136,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..319
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..426
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(365,367,381)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          517..787
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(517..521,525,537,539,568,584..587,591,593,636,638,
                     640..641,643,654,657,675..678)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(517..521,525,537,539,568,584..587,591,636,638,
                     640..641,643,654)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(521,591,593,636,638,640,657,675..678)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(653..660,671..678)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..828
                     /gene="LOC121213749"
                     /coded_by="XM_041086764.1:239..2725"
                     /db_xref="GeneID:121213749"
ORIGIN      
        1 mgktiscsvl laliscfyll fataldtitp skpikdpdvi isqkglfrlg ffslvnssnr
       61 yvgilyhqip iqtvvwvanr nrplkdssgi ltisddgnlv vsngkaeilw stnvnntapn
      121 attaqlldsg nlvlsngedg asslwesfed psnafietmk istdvkmgrk velkswksid
      181 dpsdgnfsls lepfnspegi irknnqlyyr tgpwngntfi glidkyaayl egfyvadnpq
      241 qpyymtyefs ndsmliysel dsqgkfiewk wdegkgnwin kfssyqtncd vygycgafgi
      301 cdsskrtics clkgfkprni eewsrgnwss gcsrttllhc qrdnngsgas qgddwflemk
      361 mmkvpafphl ssisngqckd qcmnmkncsc vayayddgig cmlwsgdlid vqkfsasgvd
      421 lyirlpssel dkeksskviv ittvtagivv itisalflwc gmakqrgtnk rhkqikhksy
      481 senvreslig vklqqlplfn feelatatnn fhpekrlgqg gfgpvykgtl ddgkeiavkr
      541 lskasgqgle efmnevvvis klqhrnlvrl lgccveaeek ilvyefmpnk sldaflfdpi
      601 rqrlldwrkr fniiegisrg llylhrdsrl kiihrdlkas nvlldqdlnp kisdfgmari
      661 fggdenqant krvvgtygym speyamqgqf seksdvfsyg vllleivsgr rntsfynnkd
      721 dlsllgyawk lwregniwgl vdnvilesks ysnnekeiwr cihvgllcvq eytkdrptis
      781 tvismlnsei sdlntpkqpa ftqaplmshd vedrgslngv tltnldgr
//
LOCUS       XP_040942699             795 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942699
VERSION     XP_040942699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086765.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..795
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X2"
                     /calculated_mol_wt=89021
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..136,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..286
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          303..393
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(332,334,348)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          484..754
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(484..488,492,504,506,535,551..554,558,560,603,605,
                     607..608,610,621,624,642..645)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(484..488,492,504,506,535,551..554,558,603,605,
                     607..608,610,621)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(488,558,560,603,605,607,624,642..645)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(620..627,638..645)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..795
                     /gene="LOC121213749"
                     /coded_by="XM_041086765.1:139..2526"
                     /db_xref="GeneID:121213749"
ORIGIN      
        1 mgktiscsvl laliscfyll fataldtitp skpikdpdvi isqkglfrlg ffslvnssnr
       61 yvgilyhqip iqtvvwvanr nrplkdssgi ltisddgnlv vsngkaeilw stnvnntapn
      121 attaqlldsg nlvlsngedg asslwesfed psnafietmk istdvkmgrk velkswksid
      181 dpsdgnfsls lepfnspegi irknnqlyyr tgpwngntfi glidneldsq gkfiewkwde
      241 gkgnwinkfs syqtncdvyg ycgafgicds skrticsclk gfkprnieew srgnwssgcs
      301 rttllhcqrd nngsgasqgd dwflemkmmk vpafphlssi sngqckdqcm nmkncscvay
      361 ayddgigcml wsgdlidvqk fsasgvdlyi rlpsseldke ksskvivitt vtagivviti
      421 salflwcgma kqrgtnkrhk qikhksysen vresligvkl qqlplfnfee latatnnfhp
      481 ekrlgqggfg pvykgtlddg keiavkrlsk asgqgleefm nevvvisklq hrnlvrllgc
      541 cveaeekilv yefmpnksld aflfdpirqr lldwrkrfni iegisrglly lhrdsrlkii
      601 hrdlkasnvl ldqdlnpkis dfgmarifgg denqantkrv vgtygymspe yamqgqfsek
      661 sdvfsygvll leivsgrrnt sfynnkddls llgyawklwr egniwglvdn vilesksysn
      721 nekeiwrcih vgllcvqeyt kdrptistvi smlnseisdl ntpkqpaftq aplmshdved
      781 rgslngvtlt nldgr
//
LOCUS       XP_040942700             826 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942700
VERSION     XP_040942700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086766.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..826
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X1"
                     /calculated_mol_wt=92663
     Site            order(32..33,35,38,65,75..76,110,112,121,123,125,127..135,
                     138..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..319
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..424
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(366,368,382)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          513..785
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(513..517,521,533,535,564,580..583,587,589,632,634,
                     636..637,639,650,653,671..674)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(513..517,521,533,535,564,580..583,587,632,634,
                     636..637,639,650)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(517,587,589,632,634,636,653,671..674)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(649..656,667..674)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..826
                     /gene="LOC107945009"
                     /coded_by="XM_041086766.1:80..2560"
                     /db_xref="GeneID:107945009"
ORIGIN      
        1 mgktiscsvv lslipcfyll fataldtitp sksikdpefi isqngtfrlg ffslansnnr
       61 yvgilyhqip vqtvvwvanr nrplkdssgi lnisddgnlv vlngkteilw ssnvtntapn
      121 vttahlsdlg nlvlsngdda gsslwesfqh psnafiesme istdvkkgrk veikswkshd
      181 dpsdgnfsfg iepfnvpefv iwnnnqlyfr sgpwngnmfi glilptvafs wfsvvadnrq
      241 qtffigyeds nhsmltycel dsqgkfserr wdaekgnwik sysiyhtdcd vygkcgefgm
      301 cnskkrpics clkgfkprna eewsrgnwss gcfrttplqc qrdnnngsga gqgddgflem
      361 kmmnvpafpd rssivngeck dqclkncscv ayaydagigc mmwsgdlidv kessrgvdly
      421 irlpaseldk gksskvivit tviagigvit isalflrcrm lkhkrrnkkr khikfcseni
      481 rensigvklq qlplfnfeel atatnnfnha kmlgkggfgp vyrgtlddgk eiavkrllka
      541 sgqgleefmn evvvisklqh rnlvrllgcc vegeekmlay eympnkslda llfdpakqdv
      601 ldwrkrfnii egisrgllyl hrdsrlkiih rdlkasnill deelnpkisd fgmarifggn
      661 qnqantkrvv gtygymspey vmrgqfseks dvfsfgvlll evvsgrrnts fcndqyalsl
      721 lgyawklwre gdicgivdkv ilesetyskn gnekeiwrci hvgllcvqef akdrptmptv
      781 vsmlnseisd lstpkqpafi eaplmshdve drvslndvtl tnldgr
//
LOCUS       XP_040942701             672 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942701
VERSION     XP_040942701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086767.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..672
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X2"
                     /calculated_mol_wt=75228
     Site            order(32..33,35,38,65,75..76,110,112,121,123,125,127..135,
                     138..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..319
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..424
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(366,368,382)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          513..>672
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(513..516,519,521,533,535,564,580..583,632,636..637,
                     639,649..650)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..672
                     /gene="LOC107945009"
                     /coded_by="XM_041086767.1:83..2101"
                     /db_xref="GeneID:107945009"
ORIGIN      
        1 mgktiscsvv lslipcfyll fataldtitp sksikdpefi isqngtfrlg ffslansnnr
       61 yvgilyhqip vqtvvwvanr nrplkdssgi lnisddgnlv vlngkteilw ssnvtntapn
      121 vttahlsdlg nlvlsngdda gsslwesfqh psnafiesme istdvkkgrk veikswkshd
      181 dpsdgnfsfg iepfnvpefv iwnnnqlyfr sgpwngnmfi glilptvafs wfsvvadnrq
      241 qtffigyeds nhsmltycel dsqgkfserr wdaekgnwik sysiyhtdcd vygkcgefgm
      301 cnskkrpics clkgfkprna eewsrgnwss gcfrttplqc qrdnnngsga gqgddgflem
      361 kmmnvpafpd rssivngeck dqclkncscv ayaydagigc mmwsgdlidv kessrgvdly
      421 irlpaseldk gksskvivit tviagigvit isalflrcrm lkhkrrnkkr khikfcseni
      481 rensigvklq qlplfnfeel atatnnfnha kmlgkggfgp vyrgtlddgk eiavkrllka
      541 sgqgleefmn evvvisklqh rnlvrllgcc vegeekmlay eympnkslda llfdpakqdv
      601 ldwrkrfnii egisrgllyl hrdsrlkiih rdlkasnill deelnpkisd fgmarifggn
      661 qnqantkrvv gt
//
LOCUS       XP_016730355             822 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_016730355
VERSION     XP_016730355.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016730355.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..822
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=92093
     Site            order(32..33,35,38,65,75..76,110,112,121,123,125,127..135,
                     138..149)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          335..425
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(363,365,379)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          512..781
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(512..516,520,532,534,563,579..582,586,588,631,633,
                     635..636,638,649,652,670..673)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(512..516,520,532,534,563,579..582,586,631,633,
                     635..636,638,649)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(516,586,588,631,633,635,652,670..673)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(648..655,666..673)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..822
                     /gene="LOC107941304"
                     /coded_by="XM_016874866.2:246..2714"
                     /db_xref="GeneID:107941304"
ORIGIN      
        1 mgktiscsvf lalvscfylq fgtaldiitp sksikdpesi isqsgvfrlg ffsfanssnr
       61 yvgilynqip vltvawvanr nkplkdssgi lnisddgnlv vlngkteilw ssnvtntapn
      121 tttaqlldag nlilsngddg gsslwesfed lsnafietmk istdvkkgrq velkswksps
      181 dpsdgnfsfg iepfnipegi irknnqlyfr tgpwngnmfl gsilmtavyt dgfyvvadnq
      241 qqtfymafey sndsmliyce ldsqgkfier rwdagkgnwi nryssfqtdc diygycgafg
      301 icdsskrcsc ikgfkprnie ewsrgngssg cfrttplqcq rngsggagqg ddgflkmmvk
      361 kvpafpvrss iingdckdqc lencscvaya ydagigcmfw sgdlidvqkf stsgvdlydl
      421 yirlpsseld kgkntkvivi ttviagivvi tisalflwcr makqrernek rkhikhkiyr
      481 ensigvklqq lplfnfkqla iatnnfnhak klgqggfglv ykgilddgke iavkrlskas
      541 gqgleefvne vvvisklqhr nlvrlfgccv dreekmlvye ympnksldsf ifdpvkqkil
      601 dwkkrfniie gisrgllylh rdsrlriihr dlkasnvlld relnpkisdf gmarifggne
      661 nqantkrvvg tygymspeya mrgqfseksd vfsygvllle iisgrrnisf hnrddlgllg
      721 yawklwnegn iwnlvdkais esesdsknek eiwrcinvgl icvqeyandr ptmstvvsml
      781 nseisdlntp kqpaftqapl iiqvvkntds indvtltkvn gr
//
LOCUS       XP_040942703             796 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942703
VERSION     XP_040942703.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086769.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..796
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X1"
                     /calculated_mol_wt=89637
     Site            order(34..35,37,40,67,77..78,112,114,122,125,127,129..141,
                     145..154)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(59,62,64,66,68,96,98,100,102,104,129,131,133,135,
                     137)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          75..180
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          212..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          340..430
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(371,373,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          485..755
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(485..489,493,505,507,536,552..555,559,561,604,606,
                     608..609,611,622,625,643..646)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(485..489,493,505,507,536,552..555,559,604,606,
                     608..609,611,622)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(489,559,561,604,606,608,625,643..646)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(621..628,639..646)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..796
                     /gene="LOC107943323"
                     /coded_by="XM_041086769.1:74..2464"
                     /db_xref="GeneID:107943323"
ORIGIN      
        1 mgktisscll paliscfylq lqfgtasdti rasesikdpe fiisqggvfr lgffsfanst
       61 nryvgilynq ipvqtvvwva nrnralkdss gvltisddgn lvvsngkaei lwstnvtnlv
      121 pnattaqlld sgnlvlnngd nggssslwes fqhpsnaflq tmkigvdvkt grkvhtrswk
      181 gpddpsdgnf tdclepfnip egvirnnnqi yfrtgpwngh fyigliemnt vyldgfyvva
      241 ddkgksyyet yeysnksmli yyeldyegrf verkwdagkg dwinrylilq ndcdfygkcg
      301 afgicdpkkq picrcskgfk prnaeewrrg nwssgcfrtt plqcqrdnnn gsggagqsdd
      361 gflklktmka pafpdrssii ngeckdqcmk ncscvayayd agigcmfwsg dlidvqkfpt
      421 rgvdlyirlp sselgrnkkr kqikhqfsse nigenpvgvk lqqlplfnfe elatatnnfh
      481 pekklgqggf gpvykgtldd gkeiavkrls kasgqgleef mnevvviskl qhrnlvrllg
      541 ccveaeekil vyefmpnksl daflfdsvkr rlldwrkrfn iiegisrgll ylytdsrlri
      601 ihrdlktsnv lldqdlnpki sdfgmarifg gdenqantkr vvgtygymsp eyamqgqfse
      661 ksdvfsygvl lleiisgrrn tsfynnkddl sllgyawklw regniwglvd kvilesksys
      721 nnekeiwrci hvgllcvqey tkdrptistv ismlnseisd lntpkqpaft qapqmshdve
      781 drgslndvtl tnldgr
//
LOCUS       XP_040942704             740 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            SD1-13 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942704
VERSION     XP_040942704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086770.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..740
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD1-13 isoform X2"
                     /calculated_mol_wt=82930
     Site            order(34..35,37,40,67,77..78,112,114,122,125,127,129..141,
                     145..154)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(59,62,64,66,68,96,98,100,102,104,129,131,133,135,
                     137)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          75..180
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          212..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          340..430
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(371,373,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          485..699
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          700..740
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..740
                     /gene="LOC107943323"
                     /coded_by="XM_041086770.1:76..2298"
                     /db_xref="GeneID:107943323"
ORIGIN      
        1 mgktisscll paliscfylq lqfgtasdti rasesikdpe fiisqggvfr lgffsfanst
       61 nryvgilynq ipvqtvvwva nrnralkdss gvltisddgn lvvsngkaei lwstnvtnlv
      121 pnattaqlld sgnlvlnngd nggssslwes fqhpsnaflq tmkigvdvkt grkvhtrswk
      181 gpddpsdgnf tdclepfnip egvirnnnqi yfrtgpwngh fyigliemnt vyldgfyvva
      241 ddkgksyyet yeysnksmli yyeldyegrf verkwdagkg dwinrylilq ndcdfygkcg
      301 afgicdpkkq picrcskgfk prnaeewrrg nwssgcfrtt plqcqrdnnn gsggagqsdd
      361 gflklktmka pafpdrssii ngeckdqcmk ncscvayayd agigcmfwsg dlidvqkfpt
      421 rgvdlyirlp sselgrnkkr kqikhqfsse nigenpvgvk lqqlplfnfe elatatnnfh
      481 pekklgqggf gpvykgtldd gkeiavkrls kasgqgleef mnevvviskl qhrnlvrllg
      541 ccveaeekil vyefmpnksl daflfdfgma rifggdenqa ntkrvvgtyg ymspeyamqg
      601 qfseksdvfs ygvllleiis grrntsfynn kddlsllgya wklwregniw glvdkviles
      661 ksysnnekei wrcihvgllc vqeytkdrpt istvismlns eisdlntpkq paftqapqms
      721 hdvedrgsln dvtltnldgr
//
LOCUS       XP_040942705             678 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040942705
VERSION     XP_040942705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086771.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..678
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=75350
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..136,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          210..320
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..428
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(367,369,383)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          519..>678
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(519..522,525,527,539,541,570,586..589,638,642..643,
                     645,655..656)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..678
                     /gene="LOC121213751"
                     /coded_by="XM_041086771.1:45..2081"
                     /db_xref="GeneID:121213751"
ORIGIN      
        1 mgktiscsvl laliscfyll fataldtitp sksikdpdvi isqngvfrlg ffslanssnr
       61 yvgilynqip vqtvvwvanr nrplkdssgi lnisddgnlv vsngkaevlw sshvnntapn
      121 attaqlldsg nlvlsngedg asslwesfed psnafietmk istdvktgrk velkswksid
      181 dpsdgnfsls lepfnspevi irknnqlyhr tgpwngnsfi glideytayl egfdvvadnp
      241 qqayymtydf sndsmliyie ldsqgkfier kwdegkgnwi nkyssyqtnc dvygycgafg
      301 icdsskrpic sclkgfkprn ieewsrgnws sgcfrttplq cqrdnnngsg agqgddgfle
      361 mkmmkvpafp hpssisngqc kdqcmnmknc scvayahddg igcmlwsgdl idvqkfsasg
      421 vdlyirlpss eldkgksskv ivittvtagi vaitisalfl wcgmakqrgt nkrhkqikhk
      481 sysenvgesl igvklqqlpl fnfeelatvt nnfhpekklg qggfgpvykg tlddgkeiav
      541 krlskasgqg leefmnevvv msklqhrnlv rlfgccveae ekilvyefmp nksldaflfd
      601 pvkqrlldwr krfniiegis rgllylhrds rlriihrdlk asnvlldqdl npkisdfgma
      661 rifgggenqa ntkrvvgt
//
LOCUS       XP_040942706             617 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942706
VERSION     XP_040942706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086772.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..617
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X1"
                     /calculated_mol_wt=69873
     Region          <39..110
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          127..217
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(158,160,174)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          306..576
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(306..310,314,326,328,357,373..376,380,382,425,427,
                     429..430,432,443,446,464..467)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(306..310,314,326,328,357,373..376,380,425,427,
                     429..430,432,443)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(310,380,382,425,427,429,446,464..467)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(442..449,460..467)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..617
                     /gene="LOC121213752"
                     /coded_by="XM_041086772.1:2..1855"
                     /db_xref="GeneID:121213752"
ORIGIN      
        1 mrrgailcya rldqdfhylh lassfahgla enpqvlraty snksmliyye ldydgrfvqr
       61 kwdagkgdwi nnylilktdc dfygkcgafg icdpkkqpic rcskgfkprn aeewsrgnws
      121 sgcfrttplq cqrdnnngsg gagqsddgfl klktmkapaf pvrssiinge ckdqcmkncs
      181 cvayaydagi gcmfwsgdli dvqkfptrgv dlyirlpsse ldkgfrviii ttvtagivvi
      241 tistlflwcr iakykgrnkk rkqikqqfss enigenpigv klqqlplfnf eelatatnnf
      301 hpekklgqgg fgpiykgtld dgkeiavkrl skasgqglee fmnevvvisk lqhrnlvrlf
      361 gccveaeeki lvyefmpnks ldaflfdpvk qrlldwrkrf niiegisrgl lylhrdsrlr
      421 iihrdlkasn vlldqdlnpk isdfgmarif ggdenqantk ravgtygyms peyamqgqfs
      481 eksdvfsygv llleivsgrr ntsfynnkdd lsllgyawkl wregniwglv dnvilesksy
      541 snnekeiwrc ihvgllcvqe ytkdrptist vismlnseis dlntpkqpaf tqapqmshdv
      601 edrgslndvt ltnldgr
//
LOCUS       XP_040942707             583 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942707
VERSION     XP_040942707.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086773.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X2"
                     /calculated_mol_wt=66051
     Region          <39..110
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          127..217
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(158,160,174)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          272..542
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(272..276,280,292,294,323,339..342,346,348,391,393,
                     395..396,398,409,412,430..433)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(272..276,280,292,294,323,339..342,346,391,393,
                     395..396,398,409)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(276,346,348,391,393,395,412,430..433)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(408..415,426..433)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..583
                     /gene="LOC121213752"
                     /coded_by="XM_041086773.1:2..1753"
                     /db_xref="GeneID:121213752"
ORIGIN      
        1 mrrgailcya rldqdfhylh lassfahgla enpqvlraty snksmliyye ldydgrfvqr
       61 kwdagkgdwi nnylilktdc dfygkcgafg icdpkkqpic rcskgfkprn aeewsrgnws
      121 sgcfrttplq cqrdnnngsg gagqsddgfl klktmkapaf pvrssiinge ckdqcmkncs
      181 cvayaydagi gcmfwsgdli dvqkfptrgv dlyirlpsse lgrnkkrkqi kqqfssenig
      241 enpigvklqq lplfnfeela tatnnfhpek klgqggfgpi ykgtlddgke iavkrlskas
      301 gqgleefmne vvvisklqhr nlvrlfgccv eaeekilvye fmpnksldaf lfdpvkqrll
      361 dwrkrfniie gisrgllylh rdsrlriihr dlkasnvlld qdlnpkisdf gmarifggde
      421 nqantkravg tygymspeya mqgqfseksd vfsygvllle ivsgrrntsf ynnkddlsll
      481 gyawklwreg niwglvdnvi lesksysnne keiwrcihvg llcvqeytkd rptistvism
      541 lnseisdlnt pkqpaftqap qmshdvedrg slndvtltnl dgr
//
LOCUS       XP_016730359             841 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016730359
VERSION     XP_016730359.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016730359.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..841
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X1"
                     /calculated_mol_wt=95056
     Site            order(36..37,39,42,69,79..80,114,116,124,127,129,131..140,
                     143..155)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(61,64,66,68,70,98,100,102,104,106,131,133,135,137,
                     139)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          77..181
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          213..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          340..430
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(371,373,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          530..800
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(530..534,538,550,552,581,597..600,604,606,649,651,
                     653..654,656,667,670,688..691)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(530..534,538,550,552,581,597..600,604,649,651,
                     653..654,656,667)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(534,604,606,649,651,653,670,688..691)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(666..673,684..691)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..841
                     /gene="LOC107941311"
                     /coded_by="XM_016874870.2:55..2580"
                     /db_xref="GeneID:107941311"
ORIGIN      
        1 mekvisdsvl laseilllsc fylqsgtasd titpsksikd peiiisqsgv frlgffsfan
       61 ssnryvgily hqipvqtvvw vanrnkplkd ssgilnisdd gnlvvsngka eilwssnitn
      121 lvpnattaql ldsgnlvlsn gedgasslwe sfedpsnafl etmkirtdvk kgrkvelksw
      181 ksiddpsdgs fsfgfepfni pelvirnnnk lyfrsgpwng ntfigvimkt vyidgfhvva
      241 dyqqqtyyft yeysdnyrlk yyeldsqgkl fertwdggkg ewinrysttl tescvygqcg
      301 pfgicdrtkq picsclkgfk prnieewsrg nwsggcfrtt plqcqrdknn gseagqgddd
      361 gflklqtmkv pafpdrssin ngeckdqcmk ncsyvayayd agigcmfwsg dlidmqkfst
      421 qrvnlyirlp sseldkgkst kvivitaviv givtitiiml flwcwmakrr gwkqkhkqik
      481 lqlnkgnamt kfssenvgec sigvklqqlr lfnfeelaia tsnfdhakkl gqggfgpvyr
      541 gilsdekeia vkrlskasgq gleefmneve viskiqhrnl vklfgccvea eekmlvyeym
      601 pnksldtfvf dpikktvldw rkrfniiegi srgllylhrd srlkiihrdl kagnvlldqe
      661 lnpkiadfgm arifggdenq antkrvvgty gymspeyaiq grfseksdvf sfgvllleiv
      721 sgrknttlfn nqdyfsllgy vwklwnegni wslvdkvvle pksnlkneke irrcihigll
      781 cvqeyandrp tmstvvsmln seisnfttpk qpaftqtpli thddqnrvsv ndvtltdfdg
      841 r
//
LOCUS       XP_016730360             785 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016730360
VERSION     XP_016730360.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874871.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016730360.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..785
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X2"
                     /calculated_mol_wt=88483
     Site            order(36..37,39,42,69,79..80,114,116,124,127,129,131..140,
                     143..155)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(61,64,66,68,70,98,100,102,104,106,131,133,135,137,
                     139)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          77..181
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          213..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          340..430
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(371,373,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          530..744
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..785
                     /gene="LOC107941311"
                     /coded_by="XM_016874871.2:56..2413"
                     /db_xref="GeneID:107941311"
ORIGIN      
        1 mekvisdsvl laseilllsc fylqsgtasd titpsksikd peiiisqsgv frlgffsfan
       61 ssnryvgily hqipvqtvvw vanrnkplkd ssgilnisdd gnlvvsngka eilwssnitn
      121 lvpnattaql ldsgnlvlsn gedgasslwe sfedpsnafl etmkirtdvk kgrkvelksw
      181 ksiddpsdgs fsfgfepfni pelvirnnnk lyfrsgpwng ntfigvimkt vyidgfhvva
      241 dyqqqtyyft yeysdnyrlk yyeldsqgkl fertwdggkg ewinrysttl tescvygqcg
      301 pfgicdrtkq picsclkgfk prnieewsrg nwsggcfrtt plqcqrdknn gseagqgddd
      361 gflklqtmkv pafpdrssin ngeckdqcmk ncsyvayayd agigcmfwsg dlidmqkfst
      421 qrvnlyirlp sseldkgkst kvivitaviv givtitiiml flwcwmakrr gwkqkhkqik
      481 lqlnkgnamt kfssenvgec sigvklqqlr lfnfeelaia tsnfdhakkl gqggfgpvyr
      541 gilsdekeia vkrlskasgq gleefmneve viskiqhrnl vklfgccvea eekmlvyeym
      601 pnksldtfvf dfgmarifgg denqantkrv vgtygymspe yaiqgrfsek sdvfsfgvll
      661 leivsgrknt tlfnnqdyfs llgyvwklwn egniwslvdk vvlepksnlk nekeirrcih
      721 igllcvqeya ndrptmstvv smlnseisnf ttpkqpaftq tplithddqn rvsvndvtlt
      781 dfdgr
//
LOCUS       XP_016730361             689 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016730361
VERSION     XP_016730361.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874872.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016730361.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..689
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X3"
                     /calculated_mol_wt=77624
     Site            order(36..37,39,42,69,79..80,114,116,124,127,129,131..140,
                     143..155)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(61,64,66,68,70,98,100,102,104,106,131,133,135,137,
                     139)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          77..181
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          213..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          340..430
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(371,373,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          530..>689
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(530..533,536,538,550,552,581,597..600,649,653..654,
                     656,666..667)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..689
                     /gene="LOC107941311"
                     /coded_by="XM_016874872.2:56..2125"
                     /db_xref="GeneID:107941311"
ORIGIN      
        1 mekvisdsvl laseilllsc fylqsgtasd titpsksikd peiiisqsgv frlgffsfan
       61 ssnryvgily hqipvqtvvw vanrnkplkd ssgilnisdd gnlvvsngka eilwssnitn
      121 lvpnattaql ldsgnlvlsn gedgasslwe sfedpsnafl etmkirtdvk kgrkvelksw
      181 ksiddpsdgs fsfgfepfni pelvirnnnk lyfrsgpwng ntfigvimkt vyidgfhvva
      241 dyqqqtyyft yeysdnyrlk yyeldsqgkl fertwdggkg ewinrysttl tescvygqcg
      301 pfgicdrtkq picsclkgfk prnieewsrg nwsggcfrtt plqcqrdknn gseagqgddd
      361 gflklqtmkv pafpdrssin ngeckdqcmk ncsyvayayd agigcmfwsg dlidmqkfst
      421 qrvnlyirlp sseldkgkst kvivitaviv givtitiiml flwcwmakrr gwkqkhkqik
      481 lqlnkgnamt kfssenvgec sigvklqqlr lfnfeelaia tsnfdhakkl gqggfgpvyr
      541 gilsdekeia vkrlskasgq gleefmneve viskiqhrnl vklfgccvea eekmlvyeym
      601 pnksldtfvf dpikktvldw rkrfniiegi srgllylhrd srlkiihrdl kagnvlldqe
      661 lnpkiadfgm arifggdenq antkrvvgt
//
LOCUS       XP_040942709             689 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942709
VERSION     XP_040942709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086775.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..689
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330 isoform X4"
                     /calculated_mol_wt=77624
     Site            order(36..37,39,42,69,79..80,114,116,124,127,129,131..140,
                     143..155)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(61,64,66,68,70,98,100,102,104,106,131,133,135,137,
                     139)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          77..181
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          213..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          340..430
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(371,373,387)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          530..>689
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(530..533,536,538,550,552,581,597..600,649,653..654,
                     656,666..667)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..689
                     /gene="LOC107941311"
                     /coded_by="XM_041086775.1:56..2125"
                     /db_xref="GeneID:107941311"
ORIGIN      
        1 mekvisdsvl laseilllsc fylqsgtasd titpsksikd peiiisqsgv frlgffsfan
       61 ssnryvgily hqipvqtvvw vanrnkplkd ssgilnisdd gnlvvsngka eilwssnitn
      121 lvpnattaql ldsgnlvlsn gedgasslwe sfedpsnafl etmkirtdvk kgrkvelksw
      181 ksiddpsdgs fsfgfepfni pelvirnnnk lyfrsgpwng ntfigvimkt vyidgfhvva
      241 dyqqqtyyft yeysdnyrlk yyeldsqgkl fertwdggkg ewinrysttl tescvygqcg
      301 pfgicdrtkq picsclkgfk prnieewsrg nwsggcfrtt plqcqrdknn gseagqgddd
      361 gflklqtmkv pafpdrssin ngeckdqcmk ncsyvayayd agigcmfwsg dlidmqkfst
      421 qrvnlyirlp sseldkgkst kvivitaviv givtitiiml flwcwmakrr gwkqkhkqik
      481 lqlnkgnamt kfssenvgec sigvklqqlr lfnfeelaia tsnfdhakkl gqggfgpvyr
      541 gilsdekeia vkrlskasgq gleefmneve viskiqhrnl vklfgccvea eekmlvyeym
      601 pnksldtfvf dpikktvldw rkrfniiegi srgllylhrd srlkiihrdl kagnvlldqe
      661 lnpkiadfgm arifggdenq antkrvvgt
//
LOCUS       XP_040942710             790 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PAT1 homolog [Gossypium hirsutum].
ACCESSION   XP_040942710
VERSION     XP_040942710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086776.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..790
                     /product="protein PAT1 homolog"
                     /calculated_mol_wt=87356
     Region          <190..346
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          <458..>615
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..790
                     /gene="LOC107941309"
                     /coded_by="XM_041086776.1:307..2679"
                     /db_xref="GeneID:107941309"
ORIGIN      
        1 mdasqnlkrf gdtssgdavf dasqyaffgk dvleevelgg ldddedvpav gledeeeflf
       61 drdegevlrs lsdvddltnt fsklntaisg prgsriigdg gsgqsssaae wthgeefphw
      121 ldqqpletes ipdgkcwssp planldakhl yrtssypeqq qqlqqqqqyh qhfssepilv
      181 pkssyisypp pdgrspqasp nqhsghlnip ymaggpqmas spnlsgfpns qlqlpglhhg
      241 pnyrgnmpqf tpglsvssqp snqwgsrpkl ygdnssvlnn mlqqqlthqn glippqlipq
      301 lqshqqrlqh pvqpsfshfy giqsqqfnph lspsppvmnk veailgigdl rdqraksaqk
      361 grqslrgfds galksdfgwp qftskymstd eiegilrmql vathsndpyv ddyyhqacla
      421 rksagaklrh hfcpthlrdl pprarantep haflqvdalg rlpfssirrp rpllevdppn
      481 ssavtnndqk asdipleeep mlaarvtied glcllldvdd idrflqfnql qdggaqmrqr
      541 rqvlleglga llqlvdplgk sgntdelaqk ddlvflrivs lpkgrkllar flqllppgge
      601 lmrivcmsif rhlrflfggl psdpgaaett inlarvvssc vhsidlrals vclasvvcss
      661 eqpplrplgs pagdgasfil ksvldratkl mtdsraagny nttnlslwka sfdeffnllt
      721 kycinkydtv mqslrmqtkp nmaidesdsa kaikrempvd llhaclphln dqqkkqlldl
      781 sqrpmlvgqs
//
LOCUS       XP_016730358             603 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NARROW LEAF 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016730358
VERSION     XP_016730358.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016730358.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..603
                     /product="protein NARROW LEAF 1 isoform X1"
                     /calculated_mol_wt=65379
     CDS             1..603
                     /gene="LOC107941310"
                     /coded_by="XM_016874869.2:200..2011"
                     /db_xref="GeneID:107941310"
ORIGIN      
        1 mdrsrlnmrg rcsgstpsee saldfertcc chphlpsfss ptlqpfasag qhsdnnapyf
       61 swptssrlnd aaeeranyfa nlqkgvlpet lgglpkgqqa ttllelmtir afhskilrcy
      121 slgtaigfri kkgvltdipa ilvfvsrkvd kqwlspiqcl ptalegpggv wcdvdvvefs
      181 yfgapepapk eqlyteivdd lrggdphigs gsqvanqety gtlgaivksq tgsrqvgflt
      241 nrhvavdldy pnqkmfhplp ptlgpgvylg averatsfit ddlwygifag tnpetfvrad
      301 gafipfaddf dmstvttsvk gvgeigdvkv idlqfsigsl igkhvmkvgr ssgltsgtvl
      361 ayaleyndek gicfltdflv vgenqqsfdl egdsgsliim kgengekprp igiiwggtan
      421 rgrlklkvgq ppenwtsgvd lgrllnllel diiiteeglk eavqeqraas aaaiastvgd
      481 sstpdrvllk dksenkfepl gfqiqhiple vdcnspetnp stiktefhle dginagpsie
      541 hqfipsfigr splhknfsdk vvsenlaslr sgcdedlcvs lhlgdneakr rrseastste
      601 epk
//
LOCUS       XP_040942711             509 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NARROW LEAF 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942711
VERSION     XP_040942711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086777.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..509
                     /product="protein NARROW LEAF 1 isoform X2"
                     /calculated_mol_wt=55763
     CDS             1..509
                     /gene="LOC107941310"
                     /coded_by="XM_041086777.1:187..1716"
                     /db_xref="GeneID:107941310"
ORIGIN      
        1 mdrsrlnmrg rcsgstpsee saldfertcc chphlpsfss ptlqpfasag qhsdnnapyf
       61 swptssrlnd aaeeranyfa nlqkgvlpet lgglpkgqqa ttllelmtir afhskilrcy
      121 slgtaigfri kkgvltdipa ilvfvsrkvd kqwlspiqcl ptalegpggv wcdvdvvefs
      181 yfgapepapk eqlyteivdd lrggdphigs gsqvanqety gtlgaivksq tgsrqvgflt
      241 nrhvavdldy pnqkmfhplp ptlgpgvylg averatsfit ddlwygifag tnpetfvrad
      301 gafipfaddf dmstvttsvk gvgeigdvkv idlqfsigsl igkhvmkvgr ssgltsgtvl
      361 ayaleyndek gicfltdflv vgenqqsfdl egdsgsliim kgengekprp igiiwggtan
      421 rgrlklkvgq ppenwtsgvd lgrllnllel diiiteeglk dqerrnrvmd eypnimleie
      481 ltlqlwslgy ekpysskqck nkelpqqql
//
LOCUS       XP_040942712             428 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR45 [Gossypium hirsutum].
ACCESSION   XP_040942712
VERSION     XP_040942712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086778.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..428
                     /product="serine/arginine-rich splicing factor SR45"
                     /calculated_mol_wt=47613
     Region          119..190
                     /region_name="RRM_RNPS1"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein with serine-rich domain 1 (RNPS1) and similar
                     proteins; cd12365"
                     /db_xref="CDD:409800"
     Site            order(125..129,131..132,135..136,139..140,151,155..156,
                     176..186)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409800"
     CDS             1..428
                     /gene="LOC121213755"
                     /coded_by="XM_041086778.1:122..1408"
                     /db_xref="GeneID:121213755"
ORIGIN      
        1 makptrgrrs psvsgsgsss rsrsrsrsrs rsysgsdsks ssrsrsvsrs rsaspsssrs
       61 rsrslsssps rsgssrsrsp pqrrsatdas rrgrspppqs kksspaprkt spireslvly
      121 vdslsrnvne ghlreifgnf gevvnvdlam dralnlprgf gyvefktrad aekallymdg
      181 aqidgnvvra kftlpprpka spppkpipsa ttkrdapksd nvnadtekdg pkrprepspq
      241 rkpppsprrr spvgrrggsp rrppesprrr pdspvrrrge tpprrrpasp argrsplspp
      301 rrlrsparts prrmrgspir rrsppprrrs pprrprsppr rspfnrrrsp spirrrsrsp
      361 irrplrsrsr sispprgrgp aarrgrsssy srspsprkag rrvsrsrspr rplrgrrsss
      421 ssspprrp
//
LOCUS       XP_040942713             145 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases II, IV and V subunit 8B [Gossypium
            hirsutum].
ACCESSION   XP_040942713
VERSION     XP_040942713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086779.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="DNA-directed RNA polymerases II, IV and V
                     subunit 8B"
                     /calculated_mol_wt=16436
     Region          11..143
                     /region_name="RNA_pol_Rpb8"
                     /note="RNA polymerase Rpb8; pfam03870"
                     /db_xref="CDD:461079"
     CDS             1..145
                     /gene="LOC121213756"
                     /coded_by="XM_041086779.1:154..591"
                     /db_xref="GeneID:121213756"
ORIGIN      
        1 msnlilfedi fvvdkldpdg kkfdkvtrie arsqncdmfm hldvnteiyp mhvgdkftma
       61 lahtlnldgt pdtgyfnpgr ksladkyeyv mhgklykisd dssgkglkae iyvsyggllm
      121 llrgeashvs hfeldqrlfl lirkl
//
LOCUS       XP_016730364             477 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016730364
VERSION     XP_016730364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874875.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..477
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52941
     CDS             1..477
                     /gene="LOC107941315"
                     /coded_by="XM_016874875.2:218..1651"
                     /db_xref="GeneID:107941315"
ORIGIN      
        1 magddglpsl grvkitdlip seglpsdsyk lsvstlsqsf aqysaaviqf pagdgallrs
       61 gldsaclyfq qreaypsadm ihtndsrewc ktsgyyadpq lwqetydyrp gltpiepsna
      121 melppgglpd ifgllgkaar gvldamsyyl nlrsspftei ldnvplrsre vsssvlsvcc
      181 harpsfhgaq hhnlttqddg qlmmfhdhdh qvdkslisvv ksdkaglhvr dfhgrwflvd
      241 gdlgpqeavv ypglalyqat agyvnpalhr teinnipgnm ygrcslvfkl mpksmtslsc
      301 semraaghgv eaqfqipvpv ddfmqrshpt dqlfnrntfq sfsfptaqdg smkplmrrrk
      361 nntrckplpp skrlrleaqr vlkervqdia dkkgiklrfc nlkecenhih aldspcanir
      421 meigwphgvp fvhphdlpnk akigfleaye pgwtathdmd lsltepgqas qqsancn
//
LOCUS       XP_016730365             311 aa            linear   PLN 06-AUG-2024
DEFINITION  probable BOI-related E3 ubiquitin-protein ligase 3 [Gossypium
            hirsutum].
ACCESSION   XP_016730365
VERSION     XP_016730365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874876.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="probable BOI-related E3 ubiquitin-protein ligase
                     3"
                     /calculated_mol_wt=34391
     Region          263..300
                     /region_name="mRING-HC-C3HC5_CGRF1-like"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in RING finger proteins, RNF26, RNF197 (CGRRF1),
                     RNF156 (MGRN1), RNF157 and similar proteins; cd16649"
                     /db_xref="CDD:438311"
     CDS             1..311
                     /gene="LOC107941317"
                     /coded_by="XM_016874876.2:190..1125"
                     /db_xref="GeneID:107941317"
ORIGIN      
        1 mavearhlnl fppqftgnre mmnpiqgngn myqteigygv plsgtttvae gflplynsta
       61 taamksessl tynnnvlplp rkrsrdsinp ilsfpspvqq qsnnnngnnk tcflghdisf
      121 hmeqqqldiy riisqhmekm rvemeerrkr qarkimeaie ggvmkklkak eeeiekigkl
      181 nwaleervks lcvenqiwrd laqtneatan alrtnleqvl aaaannreea eaaaadevhd
      241 aqsccgsnwe ataektvagg ggrecrncgk eeacvlllpc rhlclcticg stlhvcpvck
      301 stknasvhvn l
//
LOCUS       XP_040942714             843 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation factor 2 [Gossypium hirsutum].
ACCESSION   XP_040942714
VERSION     XP_040942714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086780.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..843
                     /product="elongation factor 2"
                     /calculated_mol_wt=93922
     Region          1..843
                     /region_name="PLN00116"
                     /note="translation elongation factor EF-2 subunit;
                     Provisional"
                     /db_xref="CDD:177730"
     CDS             1..843
                     /gene="LOC121213757"
                     /coded_by="XM_041086780.1:232..2763"
                     /db_xref="GeneID:121213757"
ORIGIN      
        1 mvkftaeelr aimdrkhnir nmsviahvdh gkstltdslv aaagiiaqev agdvrmtdtr
       61 adeaergiti kstgislyye msedslksyk gerhgneyli nlidspghvd fssevtaalr
      121 itdgalvvvd ciegvcvqte tvlrqalger irpvltvnkm drcflelqvd geeayqtfqr
      181 vienanvima tyedpllgdv qvypekgtva fsaglhgwaf tltnfakmya skfgvdeskm
      241 merlwgenff dpatkkwttk ntgsatckrg fvqfcyepik qiintcmndq kdklwpmlqk
      301 lgvtmksdek dlmgkalmkr vmqtwlpasd allemmvfhl pspskaqkyr venlyegpld
      361 diyanairnc dpegplmlyv skmipasdkg rffafgrvfs gkvstglkvr imgpnyvpge
      421 kkdlyvksvq rtviwmgkkq etvedvpcgn tvamvgldqf itknatltne kevdahpira
      481 mkfsvspvvr vavqckvasd lpklveglkr laksdpmvlc tieesgehiv agagelhlei
      541 clkdlqedfm ggaeiiksdp vvsfretvle rscrtvmsks pnkhnrlyme arpleeglae
      601 aiddgrigpr ddpkvrskil aeefgwdkdl akkiwcfgpe ttgpnmvvdm ckgvqylnei
      661 kdsvvagfqw askegalaee nmraicfevc dvvlhadaih rgggqiipta rrvfyasqlt
      721 akprllepvy lveiqapeqa lggiysvlnq krghvfeemq rpgtplynik aylpviesfg
      781 fsstlraats gqafpqcvfd hwdmmssdpl epgsqaaahv aeirkrkglk eqmtplsefe
      841 dkl
//
LOCUS       XP_016724348             825 aa            linear   PLN 06-AUG-2024
DEFINITION  molybdenum cofactor sulfurase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724348
VERSION     XP_016724348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868859.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="molybdenum cofactor sulfurase isoform X1"
                     /calculated_mol_wt=92495
     Region          4..825
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..825
                     /gene="LOC107936180"
                     /coded_by="XM_016868859.2:119..2596"
                     /db_xref="GeneID:107936180"
ORIGIN      
        1 mdgqeeflke fgdfygypna pksideirst efkrledtvy ldhagatlys elqmeaifkd
       61 ltttvygnph sqsdsssats divrearrqv ldycnasqkd ykciftsgat aalkligenf
      121 pwsckstfmy tmenhnsvlg lreyalnqga aafavdinea vdqdgasrss ltsckvlqhp
      181 vqirneakil egeltgdayn lfafpsecnf sgmrfsldlv nnvkqnaeki legspyskgh
      241 wmvlidaakg fatqppdlsl ypadfvvisf yklfgyptgl galiirngaa kllkktyfsg
      301 gtvaasiadi dfvrrregve eqfedgtisf lsiasirhgf kifntlttsa mcwhtmsltk
      361 flkrkllalr hengesvctl ygncplkvsr hdcgsivsfn lkrpdgswfg hreveklasl
      421 ygiqlrtgcf cnpgacakyl glshsdllsn leaghvcwdd ndvingkptg avrvsfgyms
      481 tyedakkfid firssfismp sefekryllr sksipcpteg fedrlpssac hlksitiypi
      541 kscagfsvns wplsntglqy drewllkslt geiltqkkvp emfliktfin lnqqilsves
      601 pycksklqik ldsdsylpgk eefylqnqry evqcyenein qwfsdavgqp ctlvrccqse
      661 ycfslnknrs mgmcrdvnsk vnfaneaqfl liseesvsdl nnrlcsktqk lscgappnvn
      721 pmrfrpnlvi sggepyaedg wrnlrignty fsslggcnrc qminfyqqtg qvkktnepla
      781 tlasyrrvkg kilfgillry dpgnkarldt nswlkvgdev hsnse
//
LOCUS       XP_016724349             814 aa            linear   PLN 06-AUG-2024
DEFINITION  molybdenum cofactor sulfurase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724349
VERSION     XP_016724349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..814
                     /product="molybdenum cofactor sulfurase isoform X2"
                     /calculated_mol_wt=91311
     Region          4..814
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..814
                     /gene="LOC107936180"
                     /coded_by="XM_016868860.2:119..2563"
                     /db_xref="GeneID:107936180"
ORIGIN      
        1 mdgqeeflke fgdfygypna pksideirst efkrledtvy ldhagatlys elqmeaifkd
       61 ltttvygnph sqsdsssats divrearrqv ldycnasqkd ykciftsgat aalkligenf
      121 pwsckstfmy tmenhnsvlg lreyalnqga aafavdinea vdqdgasrss ltsckvlqhp
      181 vqirneakil egeltecnfs gmrfsldlvn nvkqnaekil egspyskghw mvlidaakgf
      241 atqppdlsly padfvvisfy klfgyptglg aliirngaak llkktyfsgg tvaasiadid
      301 fvrrregvee qfedgtisfl siasirhgfk ifntlttsam cwhtmsltkf lkrkllalrh
      361 engesvctly gncplkvsrh dcgsivsfnl krpdgswfgh reveklasly giqlrtgcfc
      421 npgacakylg lshsdllsnl eaghvcwddn dvingkptga vrvsfgymst yedakkfidf
      481 irssfismps efekryllrs ksipcptegf edrlpssach lksitiypik scagfsvnsw
      541 plsntglqyd rewllksltg eiltqkkvpe mfliktfinl nqqilsvesp ycksklqikl
      601 dsdsylpgke efylqnqrye vqcyeneinq wfsdavgqpc tlvrccqsey cfslnknrsm
      661 gmcrdvnskv nfaneaqfll iseesvsdln nrlcsktqkl scgappnvnp mrfrpnlvis
      721 ggepyaedgw rnlrigntyf sslggcnrcq minfyqqtgq vkktneplat lasyrrvkgk
      781 ilfgillryd pgnkarldtn swlkvgdevh snse
//
LOCUS       XP_016724350             813 aa            linear   PLN 06-AUG-2024
DEFINITION  molybdenum cofactor sulfurase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016724350
VERSION     XP_016724350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868861.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..813
                     /product="molybdenum cofactor sulfurase isoform X3"
                     /calculated_mol_wt=91261
     Region          4..813
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..813
                     /gene="LOC107936180"
                     /coded_by="XM_016868861.2:119..2560"
                     /db_xref="GeneID:107936180"
ORIGIN      
        1 mdgqeeflke fgdfygypna pksideirst efkrledtvy ldhagatlys elqmeaifkd
       61 ltttvygnpr illtqklvld ycnasqkdyk ciftsgataa lkligenfpw sckstfmytm
      121 enhnsvlglr eyalnqgaaa favdineavd qdgasrsslt sckvlqhpvq irneakileg
      181 eltgdaynlf afpsecnfsg mrfsldlvnn vkqnaekile gspyskghwm vlidaakgfa
      241 tqppdlslyp adfvvisfyk lfgyptglga liirngaakl lkktyfsggt vaasiadidf
      301 vrrregveeq fedgtisfls iasirhgfki fntlttsamc whtmsltkfl krkllalrhe
      361 ngesvctlyg ncplkvsrhd cgsivsfnlk rpdgswfghr eveklaslyg iqlrtgcfcn
      421 pgacakylgl shsdllsnle aghvcwddnd vingkptgav rvsfgymsty edakkfidfi
      481 rssfismpse fekryllrsk sipcptegfe drlpssachl ksitiypiks cagfsvnswp
      541 lsntglqydr ewllksltge iltqkkvpem fliktfinln qqilsvespy cksklqikld
      601 sdsylpgkee fylqnqryev qcyeneinqw fsdavgqpct lvrccqseyc fslnknrsmg
      661 mcrdvnskvn faneaqflli seesvsdlnn rlcsktqkls cgappnvnpm rfrpnlvisg
      721 gepyaedgwr nlrigntyfs slggcnrcqm infyqqtgqv kktneplatl asyrrvkgki
      781 lfgillrydp gnkarldtns wlkvgdevhs nse
//
LOCUS       XP_040942716             802 aa            linear   PLN 06-AUG-2024
DEFINITION  molybdenum cofactor sulfurase isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942716
VERSION     XP_040942716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086782.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..802
                     /product="molybdenum cofactor sulfurase isoform X4"
                     /calculated_mol_wt=90078
     Region          4..802
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..802
                     /gene="LOC107936180"
                     /coded_by="XM_041086782.1:120..2528"
                     /db_xref="GeneID:107936180"
ORIGIN      
        1 mdgqeeflke fgdfygypna pksideirst efkrledtvy ldhagatlys elqmeaifkd
       61 ltttvygnpr illtqklvld ycnasqkdyk ciftsgataa lkligenfpw sckstfmytm
      121 enhnsvlglr eyalnqgaaa favdineavd qdgasrsslt sckvlqhpvq irneakileg
      181 eltecnfsgm rfsldlvnnv kqnaekileg spyskghwmv lidaakgfat qppdlslypa
      241 dfvvisfykl fgyptglgal iirngaakll kktyfsggtv aasiadidfv rrregveeqf
      301 edgtisflsi asirhgfkif ntlttsamcw htmsltkflk rkllalrhen gesvctlygn
      361 cplkvsrhdc gsivsfnlkr pdgswfghre veklaslygi qlrtgcfcnp gacakylgls
      421 hsdllsnlea ghvcwddndv ingkptgavr vsfgymstye dakkfidfir ssfismpsef
      481 ekryllrsks ipcptegfed rlpssachlk sitiypiksc agfsvnswpl sntglqydre
      541 wllksltgei ltqkkvpemf liktfinlnq qilsvespyc ksklqiklds dsylpgkeef
      601 ylqnqryevq cyeneinqwf sdavgqpctl vrccqseycf slnknrsmgm crdvnskvnf
      661 aneaqfllis eesvsdlnnr lcsktqklsc gappnvnpmr frpnlvisgg epyaedgwrn
      721 lrigntyfss lggcnrcqmi nfyqqtgqvk ktneplatla syrrvkgkil fgillrydpg
      781 nkarldtnsw lkvgdevhsn se
//
LOCUS       XP_040942717             686 aa            linear   PLN 06-AUG-2024
DEFINITION  molybdenum cofactor sulfurase isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942717
VERSION     XP_040942717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086783.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..686
                     /product="molybdenum cofactor sulfurase isoform X5"
                     /calculated_mol_wt=76766
     Region          5..686
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..686
                     /gene="LOC107936180"
                     /coded_by="XM_041086783.1:16..2076"
                     /db_xref="GeneID:107936180"
ORIGIN      
        1 mfcvyalnqg aaafavdine avdqdgasrs sltsckvlqh pvqirneaki legeltgday
       61 nlfafpsecn fsgmrfsldl vnnvkqnaek ilegspyskg hwmvlidaak gfatqppdls
      121 lypadfvvis fyklfgyptg lgaliirnga akllkktyfs ggtvaasiad idfvrrregv
      181 eeqfedgtis flsiasirhg fkifntltts amcwhtmslt kflkrkllal rhengesvct
      241 lygncplkvs rhdcgsivsf nlkrpdgswf ghreveklas lygiqlrtgc fcnpgacaky
      301 lglshsdlls nleaghvcwd dndvingkpt gavrvsfgym styedakkfi dfirssfism
      361 psefekryll rsksipcpte gfedrlpssa chlksitiyp ikscagfsvn swplsntglq
      421 ydrewllksl tgeiltqkkv pemfliktfi nlnqqilsve spycksklqi kldsdsylpg
      481 keefylqnqr yevqcyenei nqwfsdavgq pctlvrccqs eycfslnknr smgmcrdvns
      541 kvnfaneaqf lliseesvsd lnnrlcsktq klscgappnv npmrfrpnlv isggepyaed
      601 gwrnlrignt yfsslggcnr cqminfyqqt gqvkktnepl atlasyrrvk gkilfgillr
      661 ydpgnkarld tnswlkvgde vhsnse
//
LOCUS       XP_016724330             365 aa            linear   PLN 06-AUG-2024
DEFINITION  scopoletin 8-hydroxylase [Gossypium hirsutum].
ACCESSION   XP_016724330
VERSION     XP_016724330.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868841.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..365
                     /product="scopoletin 8-hydroxylase"
                     /calculated_mol_wt=40598
     Region          15..342
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..365
                     /gene="LOC107936166"
                     /coded_by="XM_016868841.2:53..1150"
                     /db_xref="GeneID:107936166"
ORIGIN      
        1 mapsfddgns lfnfvvrdgn gvkgmvdsgl stvpqaymqp pieridkdra rkhghppidl
       61 sklggpehde vakqivraae nlgffqvvnh gvpvdllesl kdtahdffsl paekkavyrd
      121 dvsptplvky gtsfvpqkek alewkdyism qytndaealq hwpeeirdvs leylrtsmsm
      181 vrkllqvlle nlgvkpedsm idvlvdkkmv nmnyyptcpn pdltvgvgrh sdmgtltill
      241 qdgigglyvk ieddsefgkk gewveippvp salvinvgdm vqvlsngkyk saehrvrttr
      301 tksrvsipif tmpnatakia plpevvekdg ntlykefvla dymknffsna hdgkksldfa
      361 kinsa
//
LOCUS       XP_016724331             365 aa            linear   PLN 06-AUG-2024
DEFINITION  scopoletin 8-hydroxylase [Gossypium hirsutum].
ACCESSION   XP_016724331
VERSION     XP_016724331.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868842.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..365
                     /product="scopoletin 8-hydroxylase"
                     /calculated_mol_wt=40598
     Region          20..364
                     /region_name="PLN02947"
                     /note="oxidoreductase"
                     /db_xref="CDD:215510"
     CDS             1..365
                     /gene="LOC107936167"
                     /coded_by="XM_016868842.2:59..1156"
                     /db_xref="GeneID:107936167"
ORIGIN      
        1 maptfdness lfnfvvrdgn gvkgivdsgi skvpqayiqp hadqidkksa skceippidl
       61 skldgpdhde vvnqivrase tlgffqvvnh gvpvqlldsl kqtahnffsl paerkavyrk
      121 evspsplvky gtsfvpeker alewkdyism aytnddealq qwpiecrdva lqflktshem
      181 vrnlleallg nlgeelddsk idafigkkmv nmnfyptcpn peltvgvgrh sdmgtltill
      241 qdgigglyvk vpedvdmekk gewveippip galvinvgdm lqiwsngryk saehrvrtts
      301 tksrvsipif tsplptqkva plpqvvkkdg varyrefvfs nymnsffgna hdgkkslefa
      361 qinsn
//
LOCUS       XP_016724333             405 aa            linear   PLN 06-AUG-2024
DEFINITION  scopoletin 8-hydroxylase [Gossypium hirsutum].
ACCESSION   XP_016724333
VERSION     XP_016724333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868844.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="scopoletin 8-hydroxylase"
                     /calculated_mol_wt=45304
     Region          46..394
                     /region_name="PLN02947"
                     /note="oxidoreductase"
                     /db_xref="CDD:215510"
     CDS             1..405
                     /gene="LOC107936170"
                     /coded_by="XM_016868844.2:809..2026"
                     /db_xref="GeneID:107936170"
ORIGIN      
        1 mhykqiplpl vdaitqfhfn qtlctykrnt tkalltfhtl mapslddess lfnfvvrdgn
       61 gvkgivdsgi skvprpyiqp paeqinkkna skceippidl skldgpehde vanqivraae
      121 tlgffqvvnh gvpiqlldal kqtahnffgl paerkavyrk evspsplvky gtsfvpekek
      181 alewkdyism aytnenealq qwpmecrdva lqylktshem vkklldalma nlgvelddsn
      241 idafigkkmv nmnfyptcpn peltvgvgrh sdmgtltill qdgigglyvk vpedidmekk
      301 gewveippip galvinigdm lqiwsngryk saehrvrtts tksrvsipif tspqatqkva
      361 plpqvvekdg mahyreflfs dymnsffgna hdgkksldfa kvnfs
//
LOCUS       XP_016724316             509 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: UDP-N-acetylmuramoylalanine--D-glutamate
            ligase [Gossypium hirsutum].
ACCESSION   XP_016724316
VERSION     XP_016724316.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868827.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724316.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..509
                     /product="LOW QUALITY PROTEIN:
                     UDP-N-acetylmuramoylalanine--D-glutamate ligase"
                     /calculated_mol_wt=54824
     Region          37..506
                     /region_name="MurD"
                     /note="UDP-N-acetylmuramoylalanine-D-glutamate ligase
                     [Cell wall/membrane/envelope biogenesis]; COG0771"
                     /db_xref="CDD:440534"
     CDS             1..509
                     /gene="LOC107936155"
                     /coded_by="XM_016868827.2:101..1630"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107936155"
ORIGIN      
        1 mellplnygn ktlplkstps pkitcfrtir acsprqdlkg rtvaviglgi sgkaaarlal
       61 argasvvgid qdeslssleh dpsfmalnst gfktvlgnfd wnllkdadvv vvspgvplek
      121 yglsyllqsg kqvmseldfa aealpksvkx lavtgtngks ttvtfagqml nhfgidtfvg
      181 gnlgtslsea aiqhvtspaq ecklkvavve vssyqmaipc vyfrpsvsvv lnltpdhler
      241 hktmldyaeh kcrlfshmtn aklgllsfgn qhldeavkky wnkfnpawig afpgleidte
      301 akiatfkvpd igiesqlqlg smramgkhnf fnaavaalsv agldvgvhie dinstieklr
      361 ppphrmqvvh kdihgvtwvd dskatnveat yaglmglkgq ksvillggla kvlvgqasng
      421 feelieplmg hrcvitfgas gtmihqelsd ygldipciqa tnlrdaveqa rkmakhgdai
      481 vlspacasfd efrnfehrgi vfrelalss
//
LOCUS       XP_016724332             363 aa            linear   PLN 06-AUG-2024
DEFINITION  scopoletin 8-hydroxylase [Gossypium hirsutum].
ACCESSION   XP_016724332
VERSION     XP_016724332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868843.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..363
                     /product="scopoletin 8-hydroxylase"
                     /calculated_mol_wt=40339
     Region          15..350
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..363
                     /gene="LOC107936168"
                     /coded_by="XM_016868843.2:45..1136"
                     /db_xref="GeneID:107936168"
ORIGIN      
        1 mapglddgss lfnfvvrdgn gvkgmvdlgl stvpkpyvqp pkeridkrme trhegapidl
       61 srldgpdhde vvkeivmaae tlgffqlvnh gvpvdllesl kdaahdffgq psekkavyrk
      121 evspsplvky gtsfvpekek alewkdyism iytndaealq qwpkecreva leylktsmtm
      181 vrrlleilmg nlgvelddtk idglismkmv nmnfyptcpd pdltvgvgrh sdmgtltill
      241 qdgigglyvk vaeeianigk kgewveippv pgalvinigd alqilsngky ksaehrvrtt
      301 smksrvsvpi ftsprpseki aplpqvvekd gmacyrevif gdymrnffrn vhdgkkplef
      361 aqi
//
LOCUS       XP_016724345             207 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein F16 [Gossypium hirsutum].
ACCESSION   XP_016724345
VERSION     XP_016724345.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868856.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="CASP-like protein F16"
                     /calculated_mol_wt=22021
     Region          32..173
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..207
                     /gene="LOC107936177"
                     /coded_by="XM_016868856.2:152..775"
                     /db_xref="GeneID:107936177"
ORIGIN      
        1 meksekgngv apatrspmal mgssrnenqe vntsmrtvet mlrlvpmalg vaalvvmlkn
       61 sqsndfgsvs ysdlgafryl vhangicagy sllsaiiaav prpstmpraw tfflldqilt
      121 yiilgaaavs tevlylankg dsaitwsaac gtfagfchka tiavvitfva vicyavlslv
      181 ssyrlftkfd apvnypskti eatvfhg
//
LOCUS       XP_016724347             240 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase subunit delta, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016724347
VERSION     XP_016724347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..240
                     /product="ATP synthase subunit delta, chloroplastic"
                     /calculated_mol_wt=25937
     Region          67..231
                     /region_name="OSCP"
                     /note="ATP synthase delta (OSCP) subunit; pfam00213"
                     /db_xref="CDD:459714"
     CDS             1..240
                     /gene="LOC107936179"
                     /coded_by="XM_016868858.2:296..1018"
                     /db_xref="GeneID:107936179"
ORIGIN      
        1 maslqqasis lqpkllsssq hprslpslnl sfsatfpslk lcttrplhgg akmsasaass
       61 yataladvak snntldatss dvekvekifs dpqvlqfftn ptidvlkkrq vldeivssse
      121 lqphtanfln ilvdakridl ikeivkefel vyneltdtel avvssvvkle sqhlaqiakq
      181 vqkltgaknv riktmidpsl vagftirygs sgsklidmsv kkqleeiaaq ldlgdiqlav
//
LOCUS       XP_016724322             390 aa            linear   PLN 06-AUG-2024
DEFINITION  GLABROUS1 enhancer-binding protein-like [Gossypium hirsutum].
ACCESSION   XP_016724322
VERSION     XP_016724322.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724322.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="GLABROUS1 enhancer-binding protein-like"
                     /calculated_mol_wt=42763
     Region          169..263
                     /region_name="DUF573"
                     /note="Protein of unknown function, DUF573; pfam04504"
                     /db_xref="CDD:461335"
     CDS             1..390
                     /gene="LOC107936159"
                     /coded_by="XM_016868833.2:165..1337"
                     /db_xref="GeneID:107936159"
ORIGIN      
        1 mapkrsnpie vppaasssee deevtsseee eegssteeed eedpktestp liqksppprk
       61 petatpgvvn desdesgsds esesdtatpn vkplatkpme eslnakkprs nkpltspira
      121 ssskrpgele ldakeakrpk kkvgeeglat tpaveevkkt gedakkqlfq rlfseddeia
      181 llkgmldysa kkgadpcadm nafynfvkks ihtdvtkaqm mdkirrlkkk fennagkgkk
      241 gedrtfskah eqnafelskl iwgkegisgk vessaaksng kakgnnkavv alkaefsspd
      301 kktydavpie adkvvskssg slfdkrfgvs dmeeavvklg ldmvdgekka aleakwrklq
      361 ieqlelfver selvteqakl vleyykseek
//
LOCUS       XP_016724338             369 aa            linear   PLN 06-AUG-2024
DEFINITION  (S)-2-hydroxy-acid oxidase GLO1 [Gossypium hirsutum].
ACCESSION   XP_016724338
VERSION     XP_016724338.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868849.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724338.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="(S)-2-hydroxy-acid oxidase GLO1"
                     /calculated_mol_wt=40537
     Region          1..369
                     /region_name="PLN02493"
                     /note="probable peroxisomal (S)-2-hydroxy-acid oxidase"
                     /db_xref="CDD:166134"
     CDS             1..369
                     /gene="LOC107936173"
                     /coded_by="XM_016868849.2:400..1509"
                     /db_xref="GeneID:107936173"
ORIGIN      
        1 meitnvseyq eiakqklpkm vydyyasgae dqwtlqenrf aftkilfrpr ilidvskidm
       61 tttvlgfkis mpimiaptam qkmahpegey ataraasaag timtlsswat ssveevastg
      121 pgirffqlyv ykdrnvvaql vrraeragfk aialtvdtpr lgrreadikn rftlppfltl
      181 knfegldlgk mdqaddsgla syvagqidrs lswkdvkwlq titklpilvk gvltaedtri
      241 aiqagaagii vsnhgarqld yvpatimale evvkaaqgrv pvfldggvrr gtdvfkalal
      301 gasgifigrp vvfslaaege agvrkvlsml reefeltmal sgcrslkeit rdhivtewds
      361 phprpaprl
//
LOCUS       XP_016724336             369 aa            linear   PLN 06-AUG-2024
DEFINITION  (S)-2-hydroxy-acid oxidase GLO1 [Gossypium hirsutum].
ACCESSION   XP_016724336
VERSION     XP_016724336.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868847.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="(S)-2-hydroxy-acid oxidase GLO1"
                     /calculated_mol_wt=40480
     Region          1..369
                     /region_name="PLN02493"
                     /note="probable peroxisomal (S)-2-hydroxy-acid oxidase"
                     /db_xref="CDD:166134"
     CDS             1..369
                     /gene="LOC107936172"
                     /coded_by="XM_016868847.2:376..1485"
                     /db_xref="GeneID:107936172"
ORIGIN      
        1 meitnvseyq eiakqklpkm aydyyasgae dqwtlhenrf aftkilfrpr ilidvskidm
       61 tttvlgfkis mpimiaptaf qkmahpegey ataraasaag timtlsswat ssveevastg
      121 pgirffqlyv ykdrnvvaql vrraeragfk aialtvdtpr lgrreadikn rftlppfltl
      181 knfegldlgk mdqaddsgla syvagqidrs lswkdvkwlq tittlpilvk gvltaedtri
      241 aveagaagii vsnhgarqld yvpatimale evvkaaqgrv pvfldggvrr gtdvfkalal
      301 gasgifigrp vvfslaaege agvrkvlsml rdefeltmal sgcrslkeit rdhivtewds
      361 phprpaprl
//
LOCUS       XP_016724337             369 aa            linear   PLN 06-AUG-2024
DEFINITION  (S)-2-hydroxy-acid oxidase GLO1 [Gossypium hirsutum].
ACCESSION   XP_016724337
VERSION     XP_016724337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868848.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="(S)-2-hydroxy-acid oxidase GLO1"
                     /calculated_mol_wt=40480
     Region          1..369
                     /region_name="PLN02493"
                     /note="probable peroxisomal (S)-2-hydroxy-acid oxidase"
                     /db_xref="CDD:166134"
     CDS             1..369
                     /gene="LOC107936172"
                     /coded_by="XM_016868848.2:380..1489"
                     /db_xref="GeneID:107936172"
ORIGIN      
        1 meitnvseyq eiakqklpkm aydyyasgae dqwtlhenrf aftkilfrpr ilidvskidm
       61 tttvlgfkis mpimiaptaf qkmahpegey ataraasaag timtlsswat ssveevastg
      121 pgirffqlyv ykdrnvvaql vrraeragfk aialtvdtpr lgrreadikn rftlppfltl
      181 knfegldlgk mdqaddsgla syvagqidrs lswkdvkwlq tittlpilvk gvltaedtri
      241 aveagaagii vsnhgarqld yvpatimale evvkaaqgrv pvfldggvrr gtdvfkalal
      301 gasgifigrp vvfslaaege agvrkvlsml rdefeltmal sgcrslkeit rdhivtewds
      361 phprpaprl
//
LOCUS       XP_016724334             369 aa            linear   PLN 06-AUG-2024
DEFINITION  (S)-2-hydroxy-acid oxidase GLO1 [Gossypium hirsutum].
ACCESSION   XP_016724334
VERSION     XP_016724334.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868845.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="(S)-2-hydroxy-acid oxidase GLO1"
                     /calculated_mol_wt=40480
     Region          1..369
                     /region_name="PLN02493"
                     /note="probable peroxisomal (S)-2-hydroxy-acid oxidase"
                     /db_xref="CDD:166134"
     CDS             1..369
                     /gene="LOC107936172"
                     /coded_by="XM_016868845.2:468..1577"
                     /db_xref="GeneID:107936172"
ORIGIN      
        1 meitnvseyq eiakqklpkm aydyyasgae dqwtlhenrf aftkilfrpr ilidvskidm
       61 tttvlgfkis mpimiaptaf qkmahpegey ataraasaag timtlsswat ssveevastg
      121 pgirffqlyv ykdrnvvaql vrraeragfk aialtvdtpr lgrreadikn rftlppfltl
      181 knfegldlgk mdqaddsgla syvagqidrs lswkdvkwlq tittlpilvk gvltaedtri
      241 aveagaagii vsnhgarqld yvpatimale evvkaaqgrv pvfldggvrr gtdvfkalal
      301 gasgifigrp vvfslaaege agvrkvlsml rdefeltmal sgcrslkeit rdhivtewds
      361 phprpaprl
//
LOCUS       XP_016724339             740 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene receptor [Gossypium hirsutum].
ACCESSION   XP_016724339
VERSION     XP_016724339.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868850.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724339.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..740
                     /product="ethylene receptor"
                     /calculated_mol_wt=82920
     Region          158..306
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          328..580
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          613..727
                     /region_name="REC_ETR-like"
                     /note="phosphoacceptor receiver (REC) domain of plant
                     ethylene receptors ETR1, ETR2, and EIN4, and similar
                     proteins; cd19933"
                     /db_xref="CDD:381160"
     CDS             1..740
                     /gene="LOC107936175"
                     /coded_by="XM_016868850.2:244..2466"
                     /db_xref="GeneID:107936175"
ORIGIN      
        1 mdscnciepq wppddllmky qyisdffial ayfsipleli yfvkksavfp yrwvlvqfga
       61 fivlcgathl inlwtftmht rtvamvmtta kvftavvsca talmlvhiip dllsvktrel
      121 flknkaaeld remglirtqe etgrhvrmlt heirstldrh tilkttlvel grtlaleeca
      181 lwmptrtgle lqlsytlrqq npvgytvpih lpvinqvfss shavkispkc pvarirpagk
      241 ympgevvavr vpllhlsnfq indwpelstk ryalmvlmlp sdsarqwhah elelvevvad
      301 qvavalshaa ileesmrard llmeqnvald larreaetai rarndflavm nhemrtpmha
      361 iialssllqe teltpeqrlm vetilkssnl lstlindvld lsrledgslq ldlgtfnlfa
      421 vfrevlnlik piasvkklhv slnlapdlpe yaigdekrlm qtilnvvgna vkfskegsis
      481 itafvtksel lrdsqtpeff pvpsdnhfyl rvqvkdsgvg ispqdipklf tkfaqtqsta
      541 trnsggsglg laickrfvnl meghiwiese glgkgctaif mvklgiperl nepklpfmpk
      601 vptnhgptaf pglkvlvmde ngvsrmvtkg llvhlgcdvt mvssreeclr vvshehkvvf
      661 mdvcvpgmdg yevairinek ftkrherpii valtgntdkv tkencmrvgm dgiilkpvsl
      721 dkmrsvlsdl lehrvlfeai
//
LOCUS       XP_040942718             740 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene receptor [Gossypium hirsutum].
ACCESSION   XP_040942718
VERSION     XP_040942718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086784.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..740
                     /product="ethylene receptor"
                     /calculated_mol_wt=82920
     Region          158..306
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          328..580
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          613..727
                     /region_name="REC_ETR-like"
                     /note="phosphoacceptor receiver (REC) domain of plant
                     ethylene receptors ETR1, ETR2, and EIN4, and similar
                     proteins; cd19933"
                     /db_xref="CDD:381160"
     CDS             1..740
                     /gene="LOC107936175"
                     /coded_by="XM_041086784.1:124..2346"
                     /db_xref="GeneID:107936175"
ORIGIN      
        1 mdscnciepq wppddllmky qyisdffial ayfsipleli yfvkksavfp yrwvlvqfga
       61 fivlcgathl inlwtftmht rtvamvmtta kvftavvsca talmlvhiip dllsvktrel
      121 flknkaaeld remglirtqe etgrhvrmlt heirstldrh tilkttlvel grtlaleeca
      181 lwmptrtgle lqlsytlrqq npvgytvpih lpvinqvfss shavkispkc pvarirpagk
      241 ympgevvavr vpllhlsnfq indwpelstk ryalmvlmlp sdsarqwhah elelvevvad
      301 qvavalshaa ileesmrard llmeqnvald larreaetai rarndflavm nhemrtpmha
      361 iialssllqe teltpeqrlm vetilkssnl lstlindvld lsrledgslq ldlgtfnlfa
      421 vfrevlnlik piasvkklhv slnlapdlpe yaigdekrlm qtilnvvgna vkfskegsis
      481 itafvtksel lrdsqtpeff pvpsdnhfyl rvqvkdsgvg ispqdipklf tkfaqtqsta
      541 trnsggsglg laickrfvnl meghiwiese glgkgctaif mvklgiperl nepklpfmpk
      601 vptnhgptaf pglkvlvmde ngvsrmvtkg llvhlgcdvt mvssreeclr vvshehkvvf
      661 mdvcvpgmdg yevairinek ftkrherpii valtgntdkv tkencmrvgm dgiilkpvsl
      721 dkmrsvlsdl lehrvlfeai
//
LOCUS       XP_040942720             740 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene receptor [Gossypium hirsutum].
ACCESSION   XP_040942720
VERSION     XP_040942720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086786.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..740
                     /product="ethylene receptor"
                     /calculated_mol_wt=82920
     Region          158..306
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          328..580
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          613..727
                     /region_name="REC_ETR-like"
                     /note="phosphoacceptor receiver (REC) domain of plant
                     ethylene receptors ETR1, ETR2, and EIN4, and similar
                     proteins; cd19933"
                     /db_xref="CDD:381160"
     CDS             1..740
                     /gene="LOC107936175"
                     /coded_by="XM_041086786.1:145..2367"
                     /db_xref="GeneID:107936175"
ORIGIN      
        1 mdscnciepq wppddllmky qyisdffial ayfsipleli yfvkksavfp yrwvlvqfga
       61 fivlcgathl inlwtftmht rtvamvmtta kvftavvsca talmlvhiip dllsvktrel
      121 flknkaaeld remglirtqe etgrhvrmlt heirstldrh tilkttlvel grtlaleeca
      181 lwmptrtgle lqlsytlrqq npvgytvpih lpvinqvfss shavkispkc pvarirpagk
      241 ympgevvavr vpllhlsnfq indwpelstk ryalmvlmlp sdsarqwhah elelvevvad
      301 qvavalshaa ileesmrard llmeqnvald larreaetai rarndflavm nhemrtpmha
      361 iialssllqe teltpeqrlm vetilkssnl lstlindvld lsrledgslq ldlgtfnlfa
      421 vfrevlnlik piasvkklhv slnlapdlpe yaigdekrlm qtilnvvgna vkfskegsis
      481 itafvtksel lrdsqtpeff pvpsdnhfyl rvqvkdsgvg ispqdipklf tkfaqtqsta
      541 trnsggsglg laickrfvnl meghiwiese glgkgctaif mvklgiperl nepklpfmpk
      601 vptnhgptaf pglkvlvmde ngvsrmvtkg llvhlgcdvt mvssreeclr vvshehkvvf
      661 mdvcvpgmdg yevairinek ftkrherpii valtgntdkv tkencmrvgm dgiilkpvsl
      721 dkmrsvlsdl lehrvlfeai
//
LOCUS       XP_040942721             274 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942721
VERSION     XP_040942721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086787.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="renalase isoform X1"
                     /calculated_mol_wt=30274
     Region          85..>245
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..274
                     /gene="LOC107936153"
                     /coded_by="XM_041086787.1:222..1046"
                     /db_xref="GeneID:107936153"
ORIGIN      
        1 mapsalpsfs ssflfpfktq ksfkppkplt iicssqepkk psknpqrpts rnrkrtpygt
       61 srrsilkitf tqeqvkftag vsadphvgii gggmagllca lslekrgvks tvfdtgmhgl
      121 ggrmgtrvid pqqlifdhaa qfftvsdsrf sklvdywlek glvrewqglv gqlelggrfv
      181 plpsspprfi gvngmrplad sllsetsmvn vvrpcwiskl epfngmwhls engkprgefd
      241 aiviahngnf vpqylcffll slffnsnllr svil
//
LOCUS       XP_016724311             254 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724311
VERSION     XP_016724311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868822.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="renalase isoform X2"
                     /calculated_mol_wt=27991
     Region          85..>245
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..254
                     /gene="LOC107936153"
                     /coded_by="XM_016868822.2:219..983"
                     /db_xref="GeneID:107936153"
ORIGIN      
        1 mapsalpsfs ssflfpfktq ksfkppkplt iicssqepkk psknpqrpts rnrkrtpygt
       61 srrsilkitf tqeqvkftag vsadphvgii gggmagllca lslekrgvks tvfdtgmhgl
      121 ggrmgtrvid pqqlifdhaa qfftvsdsrf sklvdywlek glvrewqglv gqlelggrfv
      181 plpsspprfi gvngmrplad sllsetsmvn vvrpcwiskl epfngmwhls engkprgefd
      241 aiviahndcr lftk
//
LOCUS       XP_040942722             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942722
VERSION     XP_040942722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086788.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16347
     Region          <96..>140
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
     CDS             1..142
                     /gene="LOC121213760"
                     /coded_by="XM_041086788.1:536..964"
                     /db_xref="GeneID:121213760"
ORIGIN      
        1 midveklisy sddlvevlkd krdinnltrc fqhfndlrsh cdadsnevhr llreyeekie
       61 ackkkteqak levadgaeme sicrrntkks lkknvdlkrs lakrrknlgf qilshasnnv
      121 ldglnmsdgh yfytglrghh sv
//
LOCUS       XP_040942723             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942723
VERSION     XP_040942723.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086789.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=13957
     CDS             1..119
                     /gene="LOC121213760"
                     /coded_by="XM_041086789.1:536..895"
                     /db_xref="GeneID:121213760"
ORIGIN      
        1 midveklisy sddlvevlkd krdinnltrc fqhfndlrsh cdadsnevhr llreyeekie
       61 ackkkteqak levadgaeme sicrrntkks lkknvdlkrs lakrrknlgf qilrwaehv
//
LOCUS       XP_016724310             302 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016724310
VERSION     XP_016724310.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868821.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724310.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="polyadenylate-binding protein-interacting
                     protein 9 isoform X1"
                     /calculated_mol_wt=33223
     Region          115..194
                     /region_name="RRM1_CID8_like"
                     /note="RNA recognition motif 1 (RRM1) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; cd12459"
                     /db_xref="CDD:409892"
     Region          210..291
                     /region_name="RRM2_CID8_like"
                     /note="RNA recognition motif 2 (RRM2) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; cd12460"
                     /db_xref="CDD:409893"
     CDS             1..302
                     /gene="LOC107936152"
                     /coded_by="XM_016868821.2:434..1342"
                     /db_xref="GeneID:107936152"
ORIGIN      
        1 maavadksge aalvaaaand knglvvetpk seskkfnvqn lvdmftklnp lakeffpssy
       61 qqnqtkndgk fnqvpvgnks vgnenfsnrr rrnnsnqgrr rlngkafraq rddsirqtvy
      121 vsdidqnvte eqlaglfsnc gqvvdcrvcg dphsvlrfaf vefadeegar aalnlngiml
      181 gfypvrvlps ktailpvnpt flprsedere mctrtvyctn idkkvsqaev knffesacge
      241 vtrlrllgdn vhstriafve famaesaiva lncsgmvlgt qplrvspskt pvrprvarpt
      301 lv
//
LOCUS       XP_040942724             285 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 9 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942724
VERSION     XP_040942724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086790.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="polyadenylate-binding protein-interacting
                     protein 9 isoform X2"
                     /calculated_mol_wt=31367
     Region          98..177
                     /region_name="RRM1_CID8_like"
                     /note="RNA recognition motif 1 (RRM1) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; cd12459"
                     /db_xref="CDD:409892"
     Region          193..274
                     /region_name="RRM2_CID8_like"
                     /note="RNA recognition motif 2 (RRM2) found in Arabidopsis
                     thaliana CTC-interacting domain protein CID8, CID9, CID10,
                     CID11, CID12, CID 13 and similar proteins; cd12460"
                     /db_xref="CDD:409893"
     CDS             1..285
                     /gene="LOC107936152"
                     /coded_by="XM_041086790.1:392..1249"
                     /db_xref="GeneID:107936152"
ORIGIN      
        1 maavadksge aalvaaaand knglvvetpk seskkfnvqn lvdmftklnp lakeffpssy
       61 qqnqtkndgk fnqrrnnsnq grrrlngkaf raqrddsirq tvyvsdidqn vteeqlaglf
      121 sncgqvvdcr vcgdphsvlr fafvefadee garaalnlng imlgfypvrv lpsktailpv
      181 nptflprsed eremctrtvy ctnidkkvsq aevknffesa cgevtrlrll gdnvhstria
      241 fvefamaesa ivalncsgmv lgtqplrvsp sktpvrprva rptlv
//
LOCUS       XP_016724354             429 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase DA2L [Gossypium hirsutum].
ACCESSION   XP_016724354
VERSION     XP_016724354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868865.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="E3 ubiquitin-protein ligase DA2L"
                     /calculated_mol_wt=47386
     Region          10..>110
                     /region_name="SIP5-like"
                     /note="SNF1-interacting protein 5 and similar proteins;
                     cd24139"
                     /db_xref="CDD:467940"
     CDS             1..429
                     /gene="LOC107936183"
                     /coded_by="XM_016868865.2:1120..2409"
                     /db_xref="GeneID:107936183"
ORIGIN      
        1 mgnklgrkrq vvderytrpq gldididvdi kklrklilds klapcypgde eccsdleecp
       61 icflyypsln rsrccrksic tecflqmknp nsarptqcpf cktpnyavey rgvktkeekg
      121 meqieeqrvi eaqlrirqqe lqdeeermqk rresststgv apgevqnssv aarssgaeev
      181 vsfqdsqpal mskqpsnprs nrdefdidle dimvteaiwq siqencgqrn sscrdaaslv
      241 qhvsgyryis pamttvagss ssasaghvca vagltewqqm tgesssnynv nlpafhmlps
      301 ssmfccnrld qvaenyhsaq spvdmsadgg mtpardegew gvdlgpevak agtsyassdv
      361 lgdasgismi ppqedeirdg fynvsepivp esyeeqmmla malslaegrt mtssvgprss
      421 yerssfsnr
//
LOCUS       XP_016724355             429 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase DA2L [Gossypium hirsutum].
ACCESSION   XP_016724355
VERSION     XP_016724355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="E3 ubiquitin-protein ligase DA2L"
                     /calculated_mol_wt=47386
     Region          10..>110
                     /region_name="SIP5-like"
                     /note="SNF1-interacting protein 5 and similar proteins;
                     cd24139"
                     /db_xref="CDD:467940"
     CDS             1..429
                     /gene="LOC107936183"
                     /coded_by="XM_016868866.2:611..1900"
                     /db_xref="GeneID:107936183"
ORIGIN      
        1 mgnklgrkrq vvderytrpq gldididvdi kklrklilds klapcypgde eccsdleecp
       61 icflyypsln rsrccrksic tecflqmknp nsarptqcpf cktpnyavey rgvktkeekg
      121 meqieeqrvi eaqlrirqqe lqdeeermqk rresststgv apgevqnssv aarssgaeev
      181 vsfqdsqpal mskqpsnprs nrdefdidle dimvteaiwq siqencgqrn sscrdaaslv
      241 qhvsgyryis pamttvagss ssasaghvca vagltewqqm tgesssnynv nlpafhmlps
      301 ssmfccnrld qvaenyhsaq spvdmsadgg mtpardegew gvdlgpevak agtsyassdv
      361 lgdasgismi ppqedeirdg fynvsepivp esyeeqmmla malslaegrt mtssvgprss
      421 yerssfsnr
//
LOCUS       XP_016724341             386 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724341
VERSION     XP_016724341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="interactor of constitutive active ROPs 4 isoform
                     X1"
                     /calculated_mol_wt=42769
     Region          <64..>305
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..386
                     /gene="LOC107936176"
                     /coded_by="XM_016868852.2:292..1452"
                     /db_xref="GeneID:107936176"
ORIGIN      
        1 mprsrtrgsd mpqrqsprgt hqvrpsssds dplhhrpitd rsspklgdrr sprgapqsdp
       61 lnqkklgtri adlesqlgqa qeelknlkdq lasaeaakke aqqelenktk kpkarepvev
      121 nekvspkrtr dskksdcsir devsednqqe tdvfevtvek taiepkvete evdqvdektn
      181 aieissvppa eselekqffq dlalkndein mlkskleeke kelvvftqen kdlekqlnea
      241 nsnissakvk eeemalklgq vgeeleaskt ntaqlkeklq sveeqkgale aemkklrvqt
      301 eqwrkaadaa aailsggvei ngrisnrcss mdkhfngvfe tpaggfagyv gspgladdmd
      361 dgfgsgkrkg sgikmfgdlw kkksqk
//
LOCUS       XP_016724342             386 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724342
VERSION     XP_016724342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="interactor of constitutive active ROPs 4 isoform
                     X1"
                     /calculated_mol_wt=42769
     Region          <64..>305
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..386
                     /gene="LOC107936176"
                     /coded_by="XM_016868853.2:298..1458"
                     /db_xref="GeneID:107936176"
ORIGIN      
        1 mprsrtrgsd mpqrqsprgt hqvrpsssds dplhhrpitd rsspklgdrr sprgapqsdp
       61 lnqkklgtri adlesqlgqa qeelknlkdq lasaeaakke aqqelenktk kpkarepvev
      121 nekvspkrtr dskksdcsir devsednqqe tdvfevtvek taiepkvete evdqvdektn
      181 aieissvppa eselekqffq dlalkndein mlkskleeke kelvvftqen kdlekqlnea
      241 nsnissakvk eeemalklgq vgeeleaskt ntaqlkeklq sveeqkgale aemkklrvqt
      301 eqwrkaadaa aailsggvei ngrisnrcss mdkhfngvfe tpaggfagyv gspgladdmd
      361 dgfgsgkrkg sgikmfgdlw kkksqk
//
LOCUS       XP_016724343             384 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016724343
VERSION     XP_016724343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868854.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..384
                     /product="interactor of constitutive active ROPs 4 isoform
                     X2"
                     /calculated_mol_wt=42512
     Region          <62..>303
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..384
                     /gene="LOC107936176"
                     /coded_by="XM_016868854.2:306..1460"
                     /db_xref="GeneID:107936176"
ORIGIN      
        1 mprsrgsdmp qrqsprgthq vrpsssdsdp lhhrpitdrs spklgdrrsp rgapqsdpln
       61 qkklgtriad lesqlgqaqe elknlkdqla saeaakkeaq qelenktkkp karepvevne
      121 kvspkrtrds kksdcsirde vsednqqetd vfevtvekta iepkveteev dqvdektnai
      181 eissvppaes elekqffqdl alkndeinml kskleekeke lvvftqenkd lekqlneans
      241 nissakvkee emalklgqvg eeleasktnt aqlkeklqsv eeqkgaleae mkklrvqteq
      301 wrkaadaaaa ilsggveing risnrcssmd khfngvfetp aggfagyvgs pgladdmddg
      361 fgsgkrkgsg ikmfgdlwkk ksqk
//
LOCUS       XP_016724344             384 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016724344
VERSION     XP_016724344.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868855.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..384
                     /product="interactor of constitutive active ROPs 4 isoform
                     X2"
                     /calculated_mol_wt=42512
     Region          <62..>303
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..384
                     /gene="LOC107936176"
                     /coded_by="XM_016868855.2:323..1477"
                     /db_xref="GeneID:107936176"
ORIGIN      
        1 mprsrgsdmp qrqsprgthq vrpsssdsdp lhhrpitdrs spklgdrrsp rgapqsdpln
       61 qkklgtriad lesqlgqaqe elknlkdqla saeaakkeaq qelenktkkp karepvevne
      121 kvspkrtrds kksdcsirde vsednqqetd vfevtvekta iepkveteev dqvdektnai
      181 eissvppaes elekqffqdl alkndeinml kskleekeke lvvftqenkd lekqlneans
      241 nissakvkee emalklgqvg eeleasktnt aqlkeklqsv eeqkgaleae mkklrvqteq
      301 wrkaadaaaa ilsggveing risnrcssmd khfngvfetp aggfagyvgs pgladdmddg
      361 fgsgkrkgsg ikmfgdlwkk ksqk
//
LOCUS       XP_016724317             360 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin 2-beta-dioxygenase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724317
VERSION     XP_016724317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868828.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..360
                     /product="gibberellin 2-beta-dioxygenase 1 isoform X1"
                     /calculated_mol_wt=40685
     Region          1..356
                     /region_name="PLN02156"
                     /note="gibberellin 2-beta-dioxygenase"
                     /db_xref="CDD:177816"
     CDS             1..360
                     /gene="LOC107936157"
                     /coded_by="XM_016868828.2:98..1180"
                     /db_xref="GeneID:107936157"
ORIGIN      
        1 mvvvskpaie qfssylknnk pttlftqipl vdlskpdskh qiikaceefg ffkvinhgvp
       61 mesismlese atkffslplc ekqktgqpqp ygyghkrigm hgdvgwveyl llttnqdpsl
      121 hsfqtfrsvk qntkrngnsf cflgvfqfyl lffffrvaln symksvkkma ceilemmadg
      181 lkiqprnvls kllmdeesds vfrvnhyppc pnvqplngng ngngdvigfg ehtdpqiisv
      241 lrsnntsglq islregswis vppdqtsffi nvgdslqvmt ngrfksvkhr vvtnsvksrl
      301 smiyfcgppl sekiaplpsl mrgdqqslyk eftwfeykks aynsrladnr lihfekiaas
//
LOCUS       XP_016724318             331 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin 2-beta-dioxygenase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724318
VERSION     XP_016724318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868829.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..331
                     /product="gibberellin 2-beta-dioxygenase 1 isoform X2"
                     /calculated_mol_wt=37147
     Region          1..327
                     /region_name="PLN02156"
                     /note="gibberellin 2-beta-dioxygenase"
                     /db_xref="CDD:177816"
     CDS             1..331
                     /gene="LOC107936157"
                     /coded_by="XM_016868829.2:143..1138"
                     /db_xref="GeneID:107936157"
ORIGIN      
        1 mvvvskpaie qfssylknnk pttlftqipl vdlskpdskh qiikaceefg ffkvinhgvp
       61 mesismlese atkffslplc ekqktgqpqp ygyghkrigm hgdvgwveyl llttnqdpsl
      121 hsfqtfrval nsymksvkkm aceilemmad glkiqprnvl skllmdeesd svfrvnhypp
      181 cpnvqplngn gngngdvigf gehtdpqiis vlrsnntsgl qislregswi svppdqtsff
      241 invgdslqvm tngrfksvkh rvvtnsvksr lsmiyfcgpp lsekiaplps lmrgdqqsly
      301 keftwfeykk saynsrladn rlihfekiaa s
//
LOCUS       XP_040942727             994 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942727
VERSION     XP_040942727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086793.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..994
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X1"
                     /calculated_mol_wt=110794
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          460..765
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(465,470,726,743)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..994
                     /gene="LOC107936942"
                     /coded_by="XM_041086793.1:268..3252"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelki sgmtddipap gingagntgt memmglrkss
      421 klarqdfpal ygnrhkkikm lfpyeefvnf frcevfdlsp rgllncgnsc yanavlqclt
      481 ctkplsiyll hgshsrtcyr kdrclmcele qhvmllrecg gplspsrils hirtincqmg
      541 dgsqedahef lrllvasmqs iclerlggeq kvdprlqett fiqhtfggrl wskvkclrcs
      601 heseryenim dltleiygwv esledaltqf ttpedldgen myrcgrcagy ararkqlrih
      661 eapniltivl krfqegkygk inkcitfpdm ldmvpfmtgt gdipplymly avvvhldtln
      721 asfsghyvsy vkdlrgnwfr iddtevhpvs msqvmseday ilfymrsypr pqravsekik
      781 qvparhltsk mekptrpaqs ksgshsvgpk lypdsrsgta agyinrdsng ilrqsansni
      841 hrvvemyaep snmefsdats sdwslftssd easfttestr dsfstvdytd tsnggdpfsi
      901 fnnlytpess scntvscsmf stsrphtryi leekgyvlgs yssaqlvnqd qvnfnqvcds
      961 ltdfsldteq gmfvkygsnl knafnrtssa hcew
//
LOCUS       XP_040942728             994 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942728
VERSION     XP_040942728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086794.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..994
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X1"
                     /calculated_mol_wt=110794
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          460..765
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(465,470,726,743)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..994
                     /gene="LOC107936942"
                     /coded_by="XM_041086794.1:346..3330"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelki sgmtddipap gingagntgt memmglrkss
      421 klarqdfpal ygnrhkkikm lfpyeefvnf frcevfdlsp rgllncgnsc yanavlqclt
      481 ctkplsiyll hgshsrtcyr kdrclmcele qhvmllrecg gplspsrils hirtincqmg
      541 dgsqedahef lrllvasmqs iclerlggeq kvdprlqett fiqhtfggrl wskvkclrcs
      601 heseryenim dltleiygwv esledaltqf ttpedldgen myrcgrcagy ararkqlrih
      661 eapniltivl krfqegkygk inkcitfpdm ldmvpfmtgt gdipplymly avvvhldtln
      721 asfsghyvsy vkdlrgnwfr iddtevhpvs msqvmseday ilfymrsypr pqravsekik
      781 qvparhltsk mekptrpaqs ksgshsvgpk lypdsrsgta agyinrdsng ilrqsansni
      841 hrvvemyaep snmefsdats sdwslftssd easfttestr dsfstvdytd tsnggdpfsi
      901 fnnlytpess scntvscsmf stsrphtryi leekgyvlgs yssaqlvnqd qvnfnqvcds
      961 ltdfsldteq gmfvkygsnl knafnrtssa hcew
//
LOCUS       XP_040942729             994 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942729
VERSION     XP_040942729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086795.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..994
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X1"
                     /calculated_mol_wt=110794
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          460..765
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(465,470,726,743)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..994
                     /gene="LOC107936942"
                     /coded_by="XM_041086795.1:259..3243"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelki sgmtddipap gingagntgt memmglrkss
      421 klarqdfpal ygnrhkkikm lfpyeefvnf frcevfdlsp rgllncgnsc yanavlqclt
      481 ctkplsiyll hgshsrtcyr kdrclmcele qhvmllrecg gplspsrils hirtincqmg
      541 dgsqedahef lrllvasmqs iclerlggeq kvdprlqett fiqhtfggrl wskvkclrcs
      601 heseryenim dltleiygwv esledaltqf ttpedldgen myrcgrcagy ararkqlrih
      661 eapniltivl krfqegkygk inkcitfpdm ldmvpfmtgt gdipplymly avvvhldtln
      721 asfsghyvsy vkdlrgnwfr iddtevhpvs msqvmseday ilfymrsypr pqravsekik
      781 qvparhltsk mekptrpaqs ksgshsvgpk lypdsrsgta agyinrdsng ilrqsansni
      841 hrvvemyaep snmefsdats sdwslftssd easfttestr dsfstvdytd tsnggdpfsi
      901 fnnlytpess scntvscsmf stsrphtryi leekgyvlgs yssaqlvnqd qvnfnqvcds
      961 ltdfsldteq gmfvkygsnl knafnrtssa hcew
//
LOCUS       XP_040942730             988 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942730
VERSION     XP_040942730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086796.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..988
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X2"
                     /calculated_mol_wt=110175
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          454..759
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(459,464,720,737)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..988
                     /gene="LOC107936942"
                     /coded_by="XM_041086796.1:267..3233"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelnd ipapgingag ntgtmemmgl rkssklarqd
      421 fpalygnrhk kikmlfpyee fvnffrcevf dlsprgllnc gnscyanavl qcltctkpls
      481 iyllhgshsr tcyrkdrclm celeqhvmll recggplsps rilshirtin cqmgdgsqed
      541 aheflrllva smqsiclerl ggeqkvdprl qettfiqhtf ggrlwskvkc lrcshesery
      601 enimdltlei ygwvesleda ltqfttpedl dgenmyrcgr cagyararkq lriheapnil
      661 tivlkrfqeg kygkinkcit fpdmldmvpf mtgtgdippl ymlyavvvhl dtlnasfsgh
      721 yvsyvkdlrg nwfriddtev hpvsmsqvms edayilfymr syprpqravs ekikqvparh
      781 ltskmekptr paqsksgshs vgpklypdsr sgtaagyinr dsngilrqsa nsnihrvvem
      841 yaepsnmefs datssdwslf tssdeasftt estrdsfstv dytdtsnggd pfsifnnlyt
      901 pessscntvs csmfstsrph tryileekgy vlgsyssaql vnqdqvnfnq vcdsltdfsl
      961 dteqgmfvky gsnlknafnr tssahcew
//
LOCUS       XP_040942731             988 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942731
VERSION     XP_040942731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086797.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..988
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X2"
                     /calculated_mol_wt=110175
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          454..759
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(459,464,720,737)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..988
                     /gene="LOC107936942"
                     /coded_by="XM_041086797.1:345..3311"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelnd ipapgingag ntgtmemmgl rkssklarqd
      421 fpalygnrhk kikmlfpyee fvnffrcevf dlsprgllnc gnscyanavl qcltctkpls
      481 iyllhgshsr tcyrkdrclm celeqhvmll recggplsps rilshirtin cqmgdgsqed
      541 aheflrllva smqsiclerl ggeqkvdprl qettfiqhtf ggrlwskvkc lrcshesery
      601 enimdltlei ygwvesleda ltqfttpedl dgenmyrcgr cagyararkq lriheapnil
      661 tivlkrfqeg kygkinkcit fpdmldmvpf mtgtgdippl ymlyavvvhl dtlnasfsgh
      721 yvsyvkdlrg nwfriddtev hpvsmsqvms edayilfymr syprpqravs ekikqvparh
      781 ltskmekptr paqsksgshs vgpklypdsr sgtaagyinr dsngilrqsa nsnihrvvem
      841 yaepsnmefs datssdwslf tssdeasftt estrdsfstv dytdtsnggd pfsifnnlyt
      901 pessscntvs csmfstsrph tryileekgy vlgsyssaql vnqdqvnfnq vcdsltdfsl
      961 dteqgmfvky gsnlknafnr tssahcew
//
LOCUS       XP_040942732             988 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942732
VERSION     XP_040942732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086798.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..988
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X2"
                     /calculated_mol_wt=110175
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          454..759
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(459,464,720,737)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..988
                     /gene="LOC107936942"
                     /coded_by="XM_041086798.1:922..3888"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelnd ipapgingag ntgtmemmgl rkssklarqd
      421 fpalygnrhk kikmlfpyee fvnffrcevf dlsprgllnc gnscyanavl qcltctkpls
      481 iyllhgshsr tcyrkdrclm celeqhvmll recggplsps rilshirtin cqmgdgsqed
      541 aheflrllva smqsiclerl ggeqkvdprl qettfiqhtf ggrlwskvkc lrcshesery
      601 enimdltlei ygwvesleda ltqfttpedl dgenmyrcgr cagyararkq lriheapnil
      661 tivlkrfqeg kygkinkcit fpdmldmvpf mtgtgdippl ymlyavvvhl dtlnasfsgh
      721 yvsyvkdlrg nwfriddtev hpvsmsqvms edayilfymr syprpqravs ekikqvparh
      781 ltskmekptr paqsksgshs vgpklypdsr sgtaagyinr dsngilrqsa nsnihrvvem
      841 yaepsnmefs datssdwslf tssdeasftt estrdsfstv dytdtsnggd pfsifnnlyt
      901 pessscntvs csmfstsrph tryileekgy vlgsyssaql vnqdqvnfnq vcdsltdfsl
      961 dteqgmfvky gsnlknafnr tssahcew
//
LOCUS       XP_040942733             988 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 15 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942733
VERSION     XP_040942733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086799.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..988
                     /product="ubiquitin carboxyl-terminal hydrolase 15 isoform
                     X2"
                     /calculated_mol_wt=110175
     Region          76..113
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          454..759
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(459,464,720,737)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..988
                     /gene="LOC107936942"
                     /coded_by="XM_041086799.1:258..3224"
                     /db_xref="GeneID:107936942"
ORIGIN      
        1 mlepreadip alflvlvvlp lvtyfllgkw sevskkrekv sllahlaaee alraetmaaa
       61 svipvvsvpk kglhvcarcf gpsttrcsrc ksvrycsgrc qiihwrqvhk eeclqlesgs
      121 vasfeesvlh sdnmnsqfle yinkqaakek assdninhcp tttglfangd cstidtsqgc
      181 apersaekrv srksngevlr redvaivdsc eetlrtrats lpinsisske afrrhksrtn
      241 gfvvsedgml kqqnangsnm lihgqnvsta mhdghkhqsq rgnmsepksn cefagppysa
      301 kggtsaheae nafvwsseni vngenaysgk svelecsgma takectksrs slqslgpkis
      361 kspkstvkvs gerlhpemer kgqipdelnd ipapgingag ntgtmemmgl rkssklarqd
      421 fpalygnrhk kikmlfpyee fvnffrcevf dlsprgllnc gnscyanavl qcltctkpls
      481 iyllhgshsr tcyrkdrclm celeqhvmll recggplsps rilshirtin cqmgdgsqed
      541 aheflrllva smqsiclerl ggeqkvdprl qettfiqhtf ggrlwskvkc lrcshesery
      601 enimdltlei ygwvesleda ltqfttpedl dgenmyrcgr cagyararkq lriheapnil
      661 tivlkrfqeg kygkinkcit fpdmldmvpf mtgtgdippl ymlyavvvhl dtlnasfsgh
      721 yvsyvkdlrg nwfriddtev hpvsmsqvms edayilfymr syprpqravs ekikqvparh
      781 ltskmekptr paqsksgshs vgpklypdsr sgtaagyinr dsngilrqsa nsnihrvvem
      841 yaepsnmefs datssdwslf tssdeasftt estrdsfstv dytdtsnggd pfsifnnlyt
      901 pessscntvs csmfstsrph tryileekgy vlgsyssaql vnqdqvnfnq vcdsltdfsl
      961 dteqgmfvky gsnlknafnr tssahcew
//
LOCUS       XP_016725218             229 aa            linear   PLN 06-AUG-2024
DEFINITION  heme-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016725218
VERSION     XP_016725218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="heme-binding protein 2"
                     /calculated_mol_wt=25635
     Region          40..219
                     /region_name="SOUL"
                     /note="SOUL heme-binding protein; pfam04832"
                     /db_xref="CDD:461449"
     CDS             1..229
                     /gene="LOC107936943"
                     /coded_by="XM_016869729.2:148..837"
                     /db_xref="GeneID:107936943"
ORIGIN      
        1 maafipfkls lllsllsnig fwpetskndv gifpptcnri ecpsfdliev gngyeirryn
       61 stiwvttspi qdislveatr tgflqlfdyi qgknkykqqi emtapvitev lpsdgpfces
      121 sfrisfylpk vnqanpppae glhiqkwkst ylavrqfsgf vtdynvgvea aaleasladt
      181 vwspaikksq keettsvylv aqynspfefs grvneiwmla dledellpv
//
LOCUS       XP_016725198             651 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.8 [Gossypium hirsutum].
ACCESSION   XP_016725198
VERSION     XP_016725198.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869709.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..651
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.8"
                     /calculated_mol_wt=74480
     Region          40..103
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          337..602
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(337..340,343,345,357,359,387,403..406,455,459..460,
                     462,472..473)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..651
                     /gene="LOC107936924"
                     /coded_by="XM_016869709.2:174..2129"
                     /db_xref="GeneID:107936924"
ORIGIN      
        1 msylkaklsl fghlmptfvl flillpgasv arhpfnqedc rstfcgnlni sypfrlknqp
       61 pqcgwhdlel ecennnhttl vlregkfsvq nifyenetiq vvdssldkdd cnslplssvy
      121 fyysdgsyyi fsprnytsyl spfsfhyyny itfssyykkr esqlsimyvv nctkpirssq
      181 yidasrcttk sntsspptsf fyfldentvl nlnqactvea vvpimvknis gmstltiynk
      241 lsegfylswn yhrsdrlylw lldffgvwst ygivvsivlr lfigipcllv lviykwrrrh
      301 lsmddkieef lqshhlapir ysfkqvkkvt knfkdklgeg gygsvfkgkl rsghhvaikl
      361 lctskgkgqd finevasigr ihhanvtkli gfcvegskqa lvydfmsngs ldkiifseek
      421 rntlgwkklf divlgvaqgi dylhqgcdmq ilhfdikphn illdenfnpk vsdfglakly
      481 svddnivslt aargtigyia pelvyknlgg isykadvysf gmlvlemvgr rknlnafanh
      541 tsqiyfpswi ydrldqgedm elgdisddek vmirkmiita fwciqllpsd rpsmnkvlkm
      601 lesnvellem ppkpfhqvpl etstevdnce nsndeesrsl dvvtitsfnv v
//
LOCUS       XP_016725200             174 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725200
VERSION     XP_016725200.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869711.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..174
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20130
     CDS             1..174
                     /gene="LOC107936926"
                     /coded_by="XM_016869711.2:323..847"
                     /db_xref="GeneID:107936926"
ORIGIN      
        1 mdsnldkddc nslplssiyf kyldgqlysi fsshyyshsh hyytsyyysr eseasmmyvv
       61 ncmkpirssq yidasrcttk sntsspptsf fyfldentvl nlnqactvea vvpimvknis
      121 gmstltiynk lyegfylswe yrqsdrfpll qsvnralhhh flygvhgigf llll
//
LOCUS       XP_016725199             398 aa            linear   PLN 06-AUG-2024
DEFINITION  rust resistance kinase Lr10 [Gossypium hirsutum].
ACCESSION   XP_016725199
VERSION     XP_016725199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869710.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..398
                     /product="rust resistance kinase Lr10"
                     /calculated_mol_wt=45083
     Region          103..367
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(103..106,109,111,123,125,153,169..172,221,225..226,
                     228,238..239)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..398
                     /gene="LOC107936925"
                     /coded_by="XM_016869710.2:782..1978"
                     /db_xref="GeneID:107936925"
ORIGIN      
        1 mstlaiynkl sdgfylswhk isllshlnfv lgaclsgitg yfiilrlllg ipcllvlviy
       61 kwrrrhlsmd dkieeflqsh nlapirysfk qvkkmtknfk dklgeggygs vfkgklcsgh
      121 yvaikllcts kgkgqdfine vasigrihha nvtkligfcv egskqalvyd fmsngsldki
      181 ifseenrntl swkklfdivi gvargidylh qgcdmqilhf dikphnilld enfnprisdf
      241 glaklyaidd sivsltaarg tigyiapklv yrnlggisyk advysfgvlv lemvrrknwn
      301 alanhtsqin fpswiydrld qgedmelgdi sddeevmirk miitafwciq llpsdrpsmn
      361 evlkmlesnv ellemppkpf hqlpletstd ihscensn
//
LOCUS       XP_016725202             719 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.2 [Gossypium hirsutum].
ACCESSION   XP_016725202
VERSION     XP_016725202.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869713.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725202.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..719
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.2"
                     /calculated_mol_wt=82248
     Region          85..148
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          404..670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(404..407,410,412,424,426,454,470..473,522,526..527,
                     529,539..540)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..719
                     /gene="LOC107936928"
                     /coded_by="XM_016869713.2:34..2193"
                     /db_xref="GeneID:107936928"
ORIGIN      
        1 mkslalllpt phgaishlei fsayipdlvr sfivalllyq iismsylkak lplfahlmpi
       61 falflilfpg aslarhlfnq evqdcgstfc gnlnisypfr lknqppqcgy ydlelacenn
      121 nrttlvlreg kffvqnffye nktiqvmdsn ldkndcnslp lssiyfkyld gqlysifssp
      181 hyyshshhyy tsyyyysres easimyvvnc wkpikssqyi dasrcitksn isfpptffyf
      241 ldrntvrnln qaciveaevp imvksisgms tlaiynklse gfylswyknp ymelsglryv
      301 mfcfglclng igmrmvslly isycgmrymm fclelclygv gvsiilrlff gipcllvlvi
      361 ykwrrrhlsm ddkieeflqs hnlapirysf kevkkmtknf kdklgeggyg svfkgklcsg
      421 hhvaikllct skgkgqdfin evasigrihh anvtkligfc vegskqalvy dfmsngsldk
      481 iiffeenrnt lgwkklfdiv igvaqginyl hqgcdmqilh fdikphnill denfnprisd
      541 fglaklhaid dsivsltaar gtigyiapel vyknlggisy kadvysfgml vlemvgrrkn
      601 lnafanhtsq iyfpswiydr ldqgedmelg ddisddekvm irkmiitafw ciqllpsdrp
      661 smnkvlkmle snvellempp kpfhqlplet stevhncens ndeesrsldv vtitsfnvv
//
LOCUS       XP_016725212             149 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725212
VERSION     XP_016725212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869723.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..149
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16483
     CDS             1..149
                     /gene="LOC107936941"
                     /coded_by="XM_016869723.2:72..521"
                     /db_xref="GeneID:107936941"
ORIGIN      
        1 myvvncwkpi kssqyidasr cttksntssp ptsffyclde ntvlnlnqtc tvkvgvpimv
       61 knisgmstla iynklskgfy lswyysenyy elsllqylkr alhhflygih gigfvtivat
      121 asslvvtrra lrrptnclga gglvstsai
//
LOCUS       XP_040942735              91 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942735
VERSION     XP_040942735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086801.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..91
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=10007
     CDS             1..91
                     /gene="LOC107936941"
                     /coded_by="XM_041086801.1:318..593"
                     /db_xref="GeneID:107936941"
ORIGIN      
        1 mvknisgmst laiynklskg fylswyysen yyelsllqyl kralhhflyg ihgigfvtiv
       61 atasslvvtr ralrrptncl gagglvstsa i
//
LOCUS       XP_040942737             340 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 14 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942737
VERSION     XP_040942737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086803.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="receptor-like protein 14 isoform X1"
                     /calculated_mol_wt=38776
     Region          30..76
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          118..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <158..>287
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          178..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..340
                     /gene="LOC107936934"
                     /coded_by="XM_041086803.1:8..1030"
                     /db_xref="GeneID:107936934"
ORIGIN      
        1 mkgmhslkli hvmnlvirlt qfdgkkacfe eermgllelk sflkqevvdg sdhvvlpswv
       61 ddprsdccgw ervscnstir rivklslsli ggvkhdcynd fvfssylnat lfqsfkdlkt
      121 lnlsynyirw qenqgmflqf hpnpslsdpa fpfpevifeh lgywiiiffi gllrlqqlet
      181 ldlsgnglts shlqslmelk slknlilscn sfngsfptpe lsgfenletl dlswnslsds
      241 preldaanfs klrnvvlhnn yfnsteilrl lgslpslrsl dlssnmlgme stlsnqgskh
      301 aislrcfnyh hhlfgvflfw vnytsshpti skilffitql
//
LOCUS       XP_040942738             304 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 14 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942738
VERSION     XP_040942738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086804.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..304
                     /product="receptor-like protein 14 isoform X2"
                     /calculated_mol_wt=34526
     Region          30..76
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <107..>251
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..304
                     /gene="LOC107936934"
                     /coded_by="XM_041086804.1:8..922"
                     /db_xref="GeneID:107936934"
ORIGIN      
        1 mkgmhslkli hvmnlvirlt qfdgkkacfe eermgllelk sflkqevvdg sdhvvlpswv
       61 ddprsdccgw ervscnstir rivklslsli ggvkhdcynd fvfssylnat lfqsfkdlkt
      121 lnlsynyirw qenqgllrlq qletldlsgn gltsshlqsl melkslknli lscnsfngsf
      181 ptpelsgfen letldlswns lsdsprelda anfsklrnvv lhnnyfnste ilrllgslps
      241 lrsldlssnm lgmestlsnq gskhaislrc fnyhhhlfgv flfwvnytss hptiskilff
      301 itql
//
LOCUS       XP_016725193             666 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.3 [Gossypium hirsutum].
ACCESSION   XP_016725193
VERSION     XP_016725193.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869704.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..666
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.3"
                     /calculated_mol_wt=75827
     Region          32..95
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          353..619
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(353..356,359,361,373,375,403,419..422,471,475..476,
                     478,488..489)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..666
                     /gene="LOC107936918"
                     /coded_by="XM_016869704.2:262..2262"
                     /db_xref="GeneID:107936918"
ORIGIN      
        1 mpklkeklpl falfvillpg vcfarhlinq dcgstfcgnl nisfpfrikg qppqcgyinl
       61 elecennnrt tlvgrggkfs vqqiiyedyt mqvidasmdt ddcnslplss vydyyydyid
      121 nyykykplhf fvndyygrwl essiiyvvnc tkpiksslyi easrcttksn ppsslptfhf
      181 yflngnihps dinqactvea evpimvrnit gmftldiykk llegiwvtwn ectyqgcdyn
      241 nkvsfkevlf dvqyklrayf gsisrsifyg gifyysnyya qdnfylgvta gffilrallg
      301 ipclfglliy kwnrrhlsmd nkieeflqsh slapirysfk eikkmtknfk yklgeggygs
      361 vfkgklrsgh yvaikllcks kgngqdfine vasigrihhv nvakligfcv kgskqalvye
      421 fmsngsldki ifseenketl gwkkmfdial gvargidylh qgcdmqilhf dikphnilld
      481 enfnpkvsdf glaklysved sivsltaarg tigyiapelv yknlggisyk advysfgmll
      541 memvgrrknl nafvdrtsqi yfpswiydql dqgedmklgd vsddekvlvk kmiitafwci
      601 qllsidrpsm sevlkmlegd vellqmppkp fhqlplqtsm evdgcessad kpstsssavn
      661 iinsnv
//
LOCUS       XP_040942741             634 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942741
VERSION     XP_040942741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086807.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..634
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72781
     Region          138..184
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          312..361
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          403..448
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          528..573
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..634
                     /gene="LOC107936931"
                     /coded_by="XM_041086807.1:20..1924"
                     /db_xref="GeneID:107936931"
ORIGIN      
        1 meiklasheh smgyhcldde tddkwcekct ekicgaayac vrcelwlhel cakaiqylpr
       61 eithplhshh hlmldwsgps apftcdlclt issgtnytcc rcafeldlvc afassddhva
      121 rkkrqrsnad rkqamqhych ihplvlykys negehdyncr wcdkpltgif ygckscgffl
      181 hefcsdkipk tlnhpfhpsh plrldfvdat cnactqlism skdfstaayg cqicnfnldf
      241 gcakllptlk heghnhglty vgptfrdpil kyhfqcsscr elcldtfyrc vecdlnlhlk
      301 cvpvpplakh ryhrhpllln qpiredeige yycdiceker dpthevyycq kctyiahiec
      361 vlnqeetstk qdsspsppis mdakasklke meqtetilvr pvfhkhplkf cevtenfggr
      421 vcgacrlels gpgyickgcl yilhencakl pdeiqhplhp qhhlnlyats mslgqnicdk
      481 cqdfyfgffy lcehcdfkld lkcatrapse sgrttlkese retelfhfth khkllfcnft
      541 dplvkrqcnl crlqifgpty hcmscgwvlh esclrlpqem qvpfhsqhtl tlsytryggc
      601 hacslkllps aiirvitmvv kivasttilh vqfp
//
LOCUS       XP_016725194              93 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH114 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016725194
VERSION     XP_016725194.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869705.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..93
                     /product="transcription factor bHLH114 isoform X1"
                     /calculated_mol_wt=10721
     Region          30..>63
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     CDS             1..93
                     /gene="LOC107936922"
                     /coded_by="XM_016869705.2:316..597"
                     /db_xref="GeneID:107936922"
ORIGIN      
        1 mgklegryqq rqpeltpenl ikalllsflq vrkeklgdri qalhqlvspf gkvhedyasl
       61 gdeicyrakd ylsihklfai fadlyrtvyt hsk
//
LOCUS       XP_016725196              93 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH114 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016725196
VERSION     XP_016725196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869707.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..93
                     /product="transcription factor bHLH114 isoform X1"
                     /calculated_mol_wt=10721
     Region          30..>63
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     CDS             1..93
                     /gene="LOC107936922"
                     /coded_by="XM_016869707.2:317..598"
                     /db_xref="GeneID:107936922"
ORIGIN      
        1 mgklegryqq rqpeltpenl ikalllsflq vrkeklgdri qalhqlvspf gkvhedyasl
       61 gdeicyrakd ylsihklfai fadlyrtvyt hsk
//
LOCUS       XP_040942742              75 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH114 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942742
VERSION     XP_040942742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086808.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..75
                     /product="transcription factor bHLH114 isoform X2"
                     /calculated_mol_wt=8363
     Region          30..>55
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(30,32,37,54..55)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     CDS             1..75
                     /gene="LOC107936922"
                     /coded_by="XM_041086808.1:312..539"
                     /db_xref="GeneID:107936922"
ORIGIN      
        1 mgklegryqq rqpeltpenl ikalllsflq vrkeklgdri qalhqlvspf gksakekqfl
       61 ydivangqng igvdk
//
LOCUS       XP_016725197             662 aa            linear   PLN 06-AUG-2024
DEFINITION  rust resistance kinase Lr10 [Gossypium hirsutum].
ACCESSION   XP_016725197
VERSION     XP_016725197.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869708.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016725197.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..662
                     /product="rust resistance kinase Lr10"
                     /calculated_mol_wt=75077
     Region          36..99
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          349..615
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(349..352,355,357,369,371,399,415..418,467,471..472,
                     474,484..485)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..662
                     /gene="LOC107936923"
                     /coded_by="XM_016869708.2:131..2119"
                     /db_xref="GeneID:107936923"
ORIGIN      
        1 mpklkaklpl lghlmpafal fvvlfpavcf arhldcgstf cgnlnisfpf rlknqplhcs
       61 pygfelecen nnrttlvgrg gkfsvqqify edytirmvda sldtddcnsl pltsvypsyy
      121 shsssfsnyy yyyyyyyknn mrlegstiyv mnctkpikss lyieasrcti ksntsssipt
      181 syfyflnent hpsdinqact ikaevpimvn sitgmstldi ykklsegfwv kwsrwdsesc
      241 ycnknkvwfk dilcavsygi svyfgcisdv iyyyhdtdht cfvvtvgvii lrvlpgilcl
      301 sglviykwrr rhlsmddkie eflqshnlap irysfkeikk mtknfknklg eggygsvfkg
      361 klrsghhvai klldkskgng qdfinevasi grihhanvak ligfcvgrsk qalvydfmpn
      421 gsldkiifte enkntlgwkk lfdivlgvaq gihylhqgcd mqilhfdikp hnilldenfn
      481 pkvsdfglak lysvedsivs ltaargtigy iapelvyknl ggisykadvy sfgmllmeiv
      541 grrknvnafa dhtsqiyfps wiydrldqge dmelgdvsdd ekvmvrkmii tafwciqllp
      601 idrpsmsevl kmlegdielc eippkpfhql pletsmevhg cessvdkpst sssavtiins
      661 nv
//
LOCUS       XP_016746887             118 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 51 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016746887
VERSION     XP_016746887.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891398.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746887.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..118
                     /product="probable protein phosphatase 2C 51 isoform X1"
                     /calculated_mol_wt=12760
     Region          10..>111
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     CDS             1..118
                     /gene="LOC107955603"
                     /coded_by="XM_016891398.2:375..731"
                     /db_xref="GeneID:107955603"
ORIGIN      
        1 megltvcmld lhipfpskig vkevsvgvva vfdghngaea semaskllle yfalytyfll
       61 datfsfvlkk qssrlpnvge gdivfqvlnw dkeigkhgln lescflfast cysagcgn
//
LOCUS       XP_016746888             115 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 51 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016746888
VERSION     XP_016746888.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746888.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="probable protein phosphatase 2C 51 isoform X2"
                     /calculated_mol_wt=12618
     Region          10..>98
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     CDS             1..115
                     /gene="LOC107955603"
                     /coded_by="XM_016891399.2:395..742"
                     /db_xref="GeneID:107955603"
ORIGIN      
        1 megltvcmld lhipfpskig vkevsvgvva vfdghngaea semaskllle yfalytyfll
       61 datfsfvlkk qssrlpnvge gdivfqvlnw dkeigkhgln leswlwelai pggfl
//
LOCUS       XP_016746889             642 aa            linear   PLN 06-AUG-2024
DEFINITION  rust resistance kinase Lr10 [Gossypium hirsutum].
ACCESSION   XP_016746889
VERSION     XP_016746889.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891400.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746889.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..642
                     /product="rust resistance kinase Lr10"
                     /calculated_mol_wt=72861
     Region          39..102
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          328..593
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(328..331,334,336,348,350,378,394..397,446,450..451,
                     453,463..464)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..642
                     /gene="LOC107955604"
                     /coded_by="XM_016891400.2:131..2059"
                     /db_xref="GeneID:107955604"
ORIGIN      
        1 mpklkaklpl lghlmpsval fvilfpavcf arslinqdcg stfcgnlnis fpfrlknqpp
       61 hcghygfefe cennnrttlv grggkfsvqq iiyenytirm vdasldtddc nslpltsvyp
      121 dyydtypyfk pyfylfsnyh yyfsynfnii yvmnctkpik sslfieascc tiksntsssl
      181 ptfyfyflng nthpsdinqa ctikaevpim idniigmstl diykkllegf wvkwsrcryq
      241 sctrnkvlfk diffgayrlc llitggvilr sfpgiiclla fvtykwrrrh lsmddmieef
      301 lksqnnlvpl rysfkeikkm tknfkdklge ggygsvfkgk lrsghhvaik llgkskgngq
      361 dfinevasig tihhanvakl igfcvegskq alvydfmsng sldkiiftee nkntlgwkkm
      421 fdivlgvaqg ihylhqgcdm qilhfdikph nilldenfnp kvsdfglakl ysvdnsivsl
      481 taargtigyi apelvyknlg gisykadvys fgmllmeivg rrknvnafad htsqiyfpsw
      541 iydrldqgdd lelgdvsdde kamvkkmvit afwciqllps drpsmskvlk mlesdvelle
      601 mapkpfhqlp letsmevhrc ensndepsts ldtvtitssn ia
//
LOCUS       XP_016746890             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoacetylglucosamine mutase [Gossypium hirsutum].
ACCESSION   XP_016746890
VERSION     XP_016746890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphoacetylglucosamine mutase"
                     /calculated_mol_wt=60680
     Region          1..560
                     /region_name="PLN02895"
                     /note="phosphoacetylglucosamine mutase"
                     /db_xref="CDD:215485"
     CDS             1..562
                     /gene="LOC107955606"
                     /coded_by="XM_016891401.2:309..1997"
                     /db_xref="GeneID:107955606"
ORIGIN      
        1 mkeeqrllll hssslffppq gvklsygtag fradasilks tvhrvgilaa lrslktqsvv
       61 glmitashnk vtdngvkivd psggmltqew epfadqlasa qtpeaflsli tefvekekip
      121 ldgvqsaeil lgrdtrpsge slleaakqgi ssilgaiald lgilttpqlh wmvrarnkgm
      181 katepayfeq isssfrclvd lipnetkssk mdntvvvdga dgvggeklev lksmltslvi
      241 evrntgkggg llndgvgady vqkekvvprg fcsndvglrc asldgdadrl vyfslptsss
      301 rkidlvdgdk ilslfalfik eqlsiltkeg tekldnsyha rlgviqtaya ngastdylke
      361 sgleviftpt gvkhlhekaa qfdigiyfea nghgtilfse swlswlearn nelglasegs
      421 eqqkaalrll svsklinqav gdalsclllv evilqhkgws ihkwnelyqd lpsrqlkvkv
      481 vdrtavatan aetvaisppg iqeaidaeta kypkgrcfir psgtedvirv yaeastqeaa
      541 dslagsvaki vdrflgfsss qq
//
LOCUS       XP_016746891             562 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoacetylglucosamine mutase [Gossypium hirsutum].
ACCESSION   XP_016746891
VERSION     XP_016746891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="phosphoacetylglucosamine mutase"
                     /calculated_mol_wt=60680
     Region          1..560
                     /region_name="PLN02895"
                     /note="phosphoacetylglucosamine mutase"
                     /db_xref="CDD:215485"
     CDS             1..562
                     /gene="LOC107955606"
                     /coded_by="XM_016891402.2:109..1797"
                     /db_xref="GeneID:107955606"
ORIGIN      
        1 mkeeqrllll hssslffppq gvklsygtag fradasilks tvhrvgilaa lrslktqsvv
       61 glmitashnk vtdngvkivd psggmltqew epfadqlasa qtpeaflsli tefvekekip
      121 ldgvqsaeil lgrdtrpsge slleaakqgi ssilgaiald lgilttpqlh wmvrarnkgm
      181 katepayfeq isssfrclvd lipnetkssk mdntvvvdga dgvggeklev lksmltslvi
      241 evrntgkggg llndgvgady vqkekvvprg fcsndvglrc asldgdadrl vyfslptsss
      301 rkidlvdgdk ilslfalfik eqlsiltkeg tekldnsyha rlgviqtaya ngastdylke
      361 sgleviftpt gvkhlhekaa qfdigiyfea nghgtilfse swlswlearn nelglasegs
      421 eqqkaalrll svsklinqav gdalsclllv evilqhkgws ihkwnelyqd lpsrqlkvkv
      481 vdrtavatan aetvaisppg iqeaidaeta kypkgrcfir psgtedvirv yaeastqeaa
      541 dslagsvaki vdrflgfsss qq
//
LOCUS       XP_016746892             153 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 [Gossypium hirsutum].
ACCESSION   XP_016746892
VERSION     XP_016746892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891403.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..153
                     /product="ubiquitin-conjugating enzyme E2 36"
                     /calculated_mol_wt=17143
     Region          6..149
                     /region_name="UBCc_UBE2N"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; cd23813"
                     /db_xref="CDD:467433"
     CDS             1..153
                     /gene="LOC107955607"
                     /coded_by="XM_016891403.2:192..653"
                     /db_xref="GeneID:107955607"
ORIGIN      
        1 mansnlprri iketqrllse papginasps ednmryfnvm ilgptqspye ggvfklelfl
       61 peeypmaapk vrfltkiyhp nidklgricl dilkdkwspa lqirtvllsi qallsapnpd
      121 dplseniakh wktneaeave takewtrlya nga
//
LOCUS       XP_016746895             557 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP72A219 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016746895
VERSION     XP_016746895.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891406.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746895.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..557
                     /product="cytochrome P450 CYP72A219 isoform X1"
                     /calculated_mol_wt=64480
     Region          85..503
                     /region_name="CYP72"
                     /note="cytochrome P450 family 72; cd20642"
                     /db_xref="CDD:410735"
     Site            order(150,154,161,210,321..322,325..326,329..330,333,383,
                     392,394,417,455..457,461..465,468..469)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410735"
     Site            order(232..233,321,324..325,329,390..393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410735"
     CDS             1..557
                     /gene="LOC107955610"
                     /coded_by="XM_016891406.2:209..1882"
                     /db_xref="GeneID:107955610"
ORIGIN      
        1 mevyhvirdl vsllvvgllm iwgwralnwv wlapkrlerc lrqqgfagnp yrflsgdike
       61 lstmsrqtra kpmplsddig pyvapflhqt vnqygknsft wigprqrvni mdpekireif
      121 tkfndfqkvr tnplltllvs glvnlegdrw skrrkiinps fhqdklknml pafyqsccdm
      181 lskwekmvct egyseldvwp ylvdltrdvi srsafgssfe egrrifqlld dqlvlrikll
      241 qtvyipgwrf lptktnrevk mkhkdikesl remikrreqa ikageesned lldilvesni
      301 remeakkkgm siedvieeck lfyfagqett svllvwtmvl larypdwqsk areevlhvlg
      361 dskpdadgln rlkvvtmily evlrlypsat elgrsvpkei klgnlllpag teisvpilli
      421 hhdkdlwgdd arefkperfa egvskatksq vtflpfgwgp ricigqnfam meakmavami
      481 lqrfwfelsp syahspcsmv tnqletvmyk gcykvlnati hlesvtykgl lhyfkesiih
      541 hlkenlklfl nflaaqe
//
LOCUS       XP_040942746             518 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP72A219 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942746
VERSION     XP_040942746.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086812.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="cytochrome P450 CYP72A219 isoform X2"
                     /calculated_mol_wt=59766
     Region          85..511
                     /region_name="CYP72"
                     /note="cytochrome P450 family 72; cd20642"
                     /db_xref="CDD:410735"
     Site            order(150,154,161,210,321..322,325..326,329..330,333,383,
                     392,394,417,455..457,461..465,468..469)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410735"
     Site            order(232..233,321,324..325,329,390..393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410735"
     CDS             1..518
                     /gene="LOC107955610"
                     /coded_by="XM_041086812.1:264..1820"
                     /db_xref="GeneID:107955610"
ORIGIN      
        1 mevyhvirdl vsllvvgllm iwgwralnwv wlapkrlerc lrqqgfagnp yrflsgdike
       61 lstmsrqtra kpmplsddig pyvapflhqt vnqygknsft wigprqrvni mdpekireif
      121 tkfndfqkvr tnplltllvs glvnlegdrw skrrkiinps fhqdklknml pafyqsccdm
      181 lskwekmvct egyseldvwp ylvdltrdvi srsafgssfe egrrifqlld dqlvlrikll
      241 qtvyipgwrf lptktnrevk mkhkdikesl remikrreqa ikageesned lldilvesni
      301 remeakkkgm siedvieeck lfyfagqett svllvwtmvl larypdwqsk areevlhvlg
      361 dskpdadgln rlkvvtmily evlrlypsat elgrsvpkei klgnlllpag teisvpilli
      421 hhdkdlwgdd arefkperfa egvskatksq vtflpfgwgp ricigqnfam meakmavami
      481 lqrfwfelsp syahspcsmv tlrpqhgaqi ilhklgsn
//
LOCUS       XP_016746896             518 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 72A15 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016746896
VERSION     XP_016746896.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891407.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746896.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="cytochrome P450 72A15 isoform X1"
                     /calculated_mol_wt=59928
     Region          84..511
                     /region_name="CYP72"
                     /note="cytochrome P450 family 72; cd20642"
                     /db_xref="CDD:410735"
     Site            order(150,154,161,210,321..322,325..326,329..330,333,383,
                     392,394,417,455..457,461..465,468..469)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410735"
     Site            order(232..233,321,324..325,329,390..393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410735"
     CDS             1..518
                     /gene="LOC107955611"
                     /coded_by="XM_016891407.2:338..1894"
                     /db_xref="GeneID:107955611"
ORIGIN      
        1 mevylvirdl vsllvvgllm iwgwrtlnwv wlapkrlerc lrqqgfagnp yrflsgdike
       61 lftmsrqtra kpmplsddig pyvvpfqhqt anqygknsft wfgprprvni tdpekireil
      121 nkfndfqkvr tnpllnllvs glvnlegdrw srrrkiinpa fhqdklknml pafyqscsdm
      181 lskwekmvct egyseldvwp ylvdltrdvi srsafgssfe egkrifqlle dqlvltikli
      241 qtvyipgwrf lptktnremk mkhrdikesl remikrreka ikageesned lldilvesni
      301 remeaknmgm siedvieeck lfyfagqett svllvwtmvl larypdwqsk areevlhvlg
      361 dskpdadgln rlkvvtmily evlrlyppvv elgrsvpkei klgnlllpvg tevsvpilqi
      421 hhdkdlwgvd arefkperfa egvskatksq vtflpfgwgp ricvgqnfam meakmamami
      481 lqrfwfelsp syahspysra tlrpqhgaqi ilhklgcn
//
LOCUS       XP_016746897             479 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 72A15 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016746897
VERSION     XP_016746897.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891408.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746897.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..479
                     /product="cytochrome P450 72A15 isoform X2"
                     /calculated_mol_wt=55378
     Region          84..472
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(171,282..283,286..287,290..291,294,344,353,355,378,
                     416..418,422..426,429..430)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(193..194,282,285..286,290,351..354)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..479
                     /gene="LOC107955611"
                     /coded_by="XM_016891408.2:328..1767"
                     /db_xref="GeneID:107955611"
ORIGIN      
        1 mevylvirdl vsllvvgllm iwgwrtlnwv wlapkrlerc lrqqgfagnp yrflsgdike
       61 lftmsrqtra kpmplsddig pyvvpfqhqt anqygknsft wfgprprvni tdpekireil
      121 nkfndfqknm lpafyqscsd mlskwekmvc tegyseldvw pylvdltrdv isrsafgssf
      181 eegkrifqll edqlvltikl iqtvyipgwr flptktnrem kmkhrdikes lremikrrek
      241 aikageesne dlldilvesn iremeaknmg msiedvieec klfyfagqet tsvllvwtmv
      301 llarypdwqs kareevlhvl gdskpdadgl nrlkvvtmil yevlrlyppv velgrsvpke
      361 iklgnlllpv gtevsvpilq ihhdkdlwgv darefkperf aegvskatks qvtflpfgwg
      421 pricvgqnfa mmeakmamam ilqrfwfels psyahspysr atlrpqhgaq iilhklgcn
//
LOCUS       XP_016746898             518 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 72A15 [Gossypium hirsutum].
ACCESSION   XP_016746898
VERSION     XP_016746898.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891409.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746898.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="cytochrome P450 72A15"
                     /calculated_mol_wt=59715
     Region          84..511
                     /region_name="CYP72"
                     /note="cytochrome P450 family 72; cd20642"
                     /db_xref="CDD:410735"
     Site            order(150,154,161,210,321..322,325..326,329..330,333,383,
                     392,394,417,455..457,461..465,468..469)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410735"
     Site            order(232..233,321,324..325,329,390..393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410735"
     CDS             1..518
                     /gene="LOC107955612"
                     /coded_by="XM_016891409.2:293..1849"
                     /db_xref="GeneID:107955612"
ORIGIN      
        1 mevylvirdl vsllfvgllm iwgcrtlnwv wlapkrlesc lrqqgfagnp yrflsgdike
       61 lstmsrqtra kpmplsddig pyvvpfqhqt anlygknsft wfgprprvni tdpekireil
      121 nkfndfqkih tnpllnllvs glanldgdrw skrrkiinpa fhqdklknml pafyqscsdm
      181 lskwekmvct kgyseldvwp ylvdltrdvi srsafgssfe egkrifqlle dqlvhiikli
      241 qtvyipgwrf lptktnremk mkhrdikell memikrreka ikageesned lldilvesni
      301 remeaknmgm siedvieeck lfylagqett svllvwtmvl larypdwqsk areevlhvlg
      361 dskpdadgln rlkvvtmily evlrlyppvv elersvpkei klgnlllpvg tevsvpilli
      421 hhdkdlwgdd arefkperfa egvskatksq vtflpfgwgp ricigqnfam meaklamami
      481 lqrfwfelsp syahspygra tlrpqhgaqi ilhklgcn
//
LOCUS       XP_016746893             302 aa            linear   PLN 06-AUG-2024
DEFINITION  persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016746893
VERSION     XP_016746893.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746893.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="persulfide dioxygenase ETHE1 homolog,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=33099
     Region          51..300
                     /region_name="PLN02962"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178547"
     CDS             1..302
                     /gene="LOC107955608"
                     /coded_by="XM_016891404.2:213..1121"
                     /db_xref="GeneID:107955608"
ORIGIN      
        1 mllnvgtfir satrfspfii thsspssfcf sfspkqtvsf alqssqmasf ttlsqsppkl
       61 lfrqlfekes stytylladc shpdkpalli dpvdrtvdrd lnlvkelglk liyamnthvh
      121 adhvtgtgli kgkvpgvksv iskasgskad vfvepgdkis fgdlflevra tpghtmgcvt
      181 yvtgdgpdqp qprmaftgda llirgcgrtd fqggssqqly ksvhsqiftl lketllypah
      241 dykgfsvttv geemlynprl tkdeetfrni menlnlaypk midvavpanm vcglqdlepk
      301 an
//
LOCUS       XP_040942748             288 aa            linear   PLN 06-AUG-2024
DEFINITION  persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942748
VERSION     XP_040942748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086814.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="persulfide dioxygenase ETHE1 homolog,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=31611
     Region          51..286
                     /region_name="PLN02962"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178547"
     CDS             1..288
                     /gene="LOC107955608"
                     /coded_by="XM_041086814.1:202..1068"
                     /db_xref="GeneID:107955608"
ORIGIN      
        1 mllnvgtfir satrfspfii thsspssfcf sfspkqtvsf alqssqmasf ttlsqsppkl
       61 lfrqlfekes stytylladc shpdkpalli dpvdrtvdrd lnlvkelglk liyamnthvh
      121 adhvtgtgli kgkvpgvksv iskasgskad vfvepgdkis fgdlflevra tpghtmgcvt
      181 yvtgdgpdqp qprmaftgda llirgcgrtd fqiftllket llypahdykg fsvttvgeem
      241 lynprltkde etfrnimenl nlaypkmidv avpanmvcgl qdlepkan
//
LOCUS       XP_040942749             272 aa            linear   PLN 06-AUG-2024
DEFINITION  persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040942749
VERSION     XP_040942749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086815.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="persulfide dioxygenase ETHE1 homolog,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=29886
     Region          51..264
                     /region_name="PLN02962"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178547"
     CDS             1..272
                     /gene="LOC107955608"
                     /coded_by="XM_041086815.1:209..1027"
                     /db_xref="GeneID:107955608"
ORIGIN      
        1 mllnvgtfir satrfspfii thsspssfcf sfspkqtvsf alqssqmasf ttlsqsppkl
       61 lfrqlfekes stytylladc shpdkpalli dpvdrtvdrd lnlvkelglk liyamnthvh
      121 adhvtgtgli kgkvpgvksv iskasgskad vfvepgdkis fgdlflevra tpghtmgcvt
      181 yvtgdgpdqp qprmaftgda llirgcgrtd fqggssqqly ksvhsqiftl lketllypah
      241 dykgfsvttv geemlynprl tkdeiltwhi lr
//
LOCUS       XP_016746894             256 aa            linear   PLN 06-AUG-2024
DEFINITION  persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_016746894
VERSION     XP_016746894.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746894.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="persulfide dioxygenase ETHE1 homolog,
                     mitochondrial isoform X4"
                     /calculated_mol_wt=28028
     Region          5..254
                     /region_name="PLN02962"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178547"
     CDS             1..256
                     /gene="LOC107955608"
                     /coded_by="XM_016891405.2:282..1052"
                     /db_xref="GeneID:107955608"
ORIGIN      
        1 masfttlsqs ppkllfrqlf ekesstytyl ladcshpdkp allidpvdrt vdrdlnlvke
       61 lglkliyamn thvhadhvtg tglikgkvpg vksviskasg skadvfvepg dkisfgdlfl
      121 evratpghtm gcvtyvtgdg pdqpqprmaf tgdallirgc grtdfqggss qqlyksvhsq
      181 iftllketll ypahdykgfs vttvgeemly nprltkdeet frnimenlnl aypkmidvav
      241 panmvcglqd lepkan
//
LOCUS       XP_016746899             161 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L18a-like protein [Gossypium hirsutum].
ACCESSION   XP_016746899
VERSION     XP_016746899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891410.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..161
                     /product="60S ribosomal protein L18a-like protein"
                     /calculated_mol_wt=17682
     CDS             1..161
                     /gene="LOC107955613"
                     /coded_by="XM_016891410.2:129..614"
                     /db_xref="GeneID:107955613"
ORIGIN      
        1 msnedrnrgv avdklqhnqy gtfqgvanyp pprpprphhh nphphqhqhq hqhhgptigf
       61 pppasiappq yypqayqtvp gydvaegtpv rdklpccgig fgwflfiigf figglpwyig
      121 ffvllcarid drekagyiac tiaallatit iilsatikvg g
//
LOCUS       XP_016746900             518 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 72A15 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016746900
VERSION     XP_016746900.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891411.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016746900.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="cytochrome P450 72A15 isoform X1"
                     /calculated_mol_wt=59849
     Region          84..511
                     /region_name="CYP72"
                     /note="cytochrome P450 family 72; cd20642"
                     /db_xref="CDD:410735"
     Site            order(150,154,161,210,321..322,325..326,329..330,333,383,
                     392,394,417,455..457,461..465,468..469)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410735"
     Site            order(232..233,321,324..325,329,390..393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410735"
     CDS             1..518
                     /gene="LOC107955614"
                     /coded_by="XM_016891411.2:547..2103"
                     /db_xref="GeneID:107955614"
ORIGIN      
        1 mevylvirdl vsllvvgllm iwgwralnwv wltpkrlerc lkqqgfagnp yrflsgdike
       61 sftmsrqtra kpmhvsddie ayvvpflhqt innhgnnsfm wigprprvti mdpekireif
      121 tkftdfqkph snplvrflvg glsnlegdqw skhrkilnpa fhqdklknml pafyqscnem
      181 iskweemvsk egyseldvwp yivnmtrdvi sraafgssye egrgifqlle dltsltikvf
      241 qsvyipgwrf lptktnrelk mkhkdikesl remikrreka ikageesned lldilvesni
      301 remeakhkgm siedvieeck lfyfagqett svllvwtmvl larypdwqtk ardevlhvlg
      361 drkpdadgln rlkvvtmily evlrlypavv slarsipkei klgnlllpag tevllpilqi
      421 hhdkdhwgdd ahefrperfa egvskatksq vtflpfgwgp ricigqnfam meakmamami
      481 lqrfwfelsp syahspctmi tlrpqhgaqi ilhklgsn
//
LOCUS       XP_040942750             473 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 72A15 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942750
VERSION     XP_040942750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086816.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..473
                     /product="cytochrome P450 72A15 isoform X2"
                     /calculated_mol_wt=54506
     Region          96..466
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(105,109,116,165,276..277,280..281,284..285,288,338,
                     347,349,372,410..412,416..420,423..424)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410735"
     Site            order(187..188,276,279..280,284,345..348)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410735"
     CDS             1..473
                     /gene="LOC107955614"
                     /coded_by="XM_041086816.1:114..1535"
                     /db_xref="GeneID:107955614"
ORIGIN      
        1 mevylvirdl vsllvvgllm iwgwralnwv wltpkrlerc lkqqgfagnp yrflsgdike
       61 sftmsrqtra kpmhvsddie ayvvpflhqt innhgglsnl egdqwskhrk ilnpafhqdk
      121 lknmlpafyq scnemiskwe emvskegyse ldvwpyivnm trdvisraaf gssyeegrgi
      181 fqlledltsl tikvfqsvyi pgwrflptkt nrelkmkhkd ikeslremik rrekaikage
      241 esnedlldil vesniremea khkgmsiedv ieecklfyfa gqettsvllv wtmvllaryp
      301 dwqtkardev lhvlgdrkpd adglnrlkvv tmilyevlrl ypavvslars ipkeiklgnl
      361 llpagtevll pilqihhdkd hwgddahefr perfaegvsk atksqvtflp fgwgpricig
      421 qnfammeakm amamilqrfw felspsyahs pctmitlrpq hgaqiilhkl gsn
//
LOCUS       XP_016746901              78 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016746901
VERSION     XP_016746901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016891412.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..78
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9010
     Region          7..68
                     /region_name="Complex1_LYR_LYRM2"
                     /note="LYR (leucine-tyrosine-arginine) motif found in LYR
                     motif-containing protein 2 (LYRM2) and similar proteins;
                     cd20262"
                     /db_xref="CDD:380757"
     CDS             1..78
                     /gene="LOC107955615"
                     /coded_by="XM_016891412.2:203..439"
                     /db_xref="GeneID:107955615"
ORIGIN      
        1 mdlqgfllra rvlklyrqal raarkaphds raelkqvirq emesnrdckd rqkirflise
       61 gterlkglte mlgmqghc
//
LOCUS       XP_040942751             131 aa            linear   PLN 06-AUG-2024
DEFINITION  3beta-hydroxysteroid-dehydrogenase/decarboxylase-like [Gossypium
            hirsutum].
ACCESSION   XP_040942751
VERSION     XP_040942751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086817.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="3beta-hydroxysteroid-
                     dehydrogenase/decarboxylase-like"
                     /calculated_mol_wt=14373
     Region          <25..>127
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..131
                     /gene="LOC121213766"
                     /coded_by="XM_041086817.1:332..727"
                     /db_xref="GeneID:121213766"
ORIGIN      
        1 mylvwrsnsr dpenlarisv hklhgaknvi nacqeskvkr lvyyssadvv fygsqdilng
       61 desfaypgts kdmtvdlkfe aeglirlank igslqtcvlr psnvfgsget qfvpllvnla
      121 kfglakvceq s
//
LOCUS       XP_040942752            1050 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein At4g10780 [Gossypium hirsutum].
ACCESSION   XP_040942752
VERSION     XP_040942752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086818.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1050
                     /product="putative disease resistance protein At4g10780"
                     /calculated_mol_wt=120037
     Region          147..380
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <490..>673
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          516..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1050
                     /gene="LOC107928037"
                     /coded_by="XM_041086818.1:461..3613"
                     /db_xref="GeneID:107928037"
ORIGIN      
        1 melvgpicev lkclgdptct yiehhrklkd rmndlqerlv rlnamkkdve rrinaelrwg
       61 rllreevekw lldvqtvnnt mrdidermqn vscfsrarlg kriaqtveqv egiiergrfp
      121 ealvidnpst vgvpfqsehl egeimviedi wnylmsdeig migvcgmggi gkttivkhiy
      181 yqllketkpl fdkiiwvtvs kelnipklqq nlanamnivg lpeseperva vlmdklgqrr
      241 yvlilddvwk efslaevgip kptssngskl vltsrsidvc isldckvvkv pplsneesmn
      301 lflehagrgv lkvpslkqil ddvvkecdgl plaiaviags mkgiydvaew rnalrelrdh
      361 vrsvkgadve iyerlkfsfd rlgdlkiqsc flycslyped yiipreelie ywideeflgt
      421 gsrqelydkg htilnrlenn cllekagtdt vkmhdvmrdt alyikgsgsr fkvqsgnglk
      481 elpskqewge dlekvsfmvn nvseipphls pnceilstll lqnnkcleri sesffqhmhs
      541 lsildlsyts ikqlpnsvsn lqtlialvlr gcnklryvps leklkalrkl nlrdtameev
      601 pkglemlvnl tyldlstesl kefpmailpq lsclqylify sksctvkldg seaarlrkle
      661 kfegrfnelt dfndytdsir gqsltsyllv mappeakfkv kegtrklklk ydgpgditvp
      721 klmkmiealq gveyvaikei ngqvkvkvtg drtdvtltky idlqqlslgp nrrgfrsvlh
      781 kevilsgcqi grdpvilptd lmllrifesh nvrslsdisi ffqqasqlrf csvedckgie
      841 sildssysns lcsplenley lwlerldnlh vlikleapls isrslpllgi fshlksfvik
      901 kclnmkrlfp fklahdlqyl enlvvcdcvq meeiisseee nhkgngintp mkfsfpnlre
      961 lrlknlpelk sicssnremv cnslmkievk kctnlkrmpl ylplfqdthq sapsahpfll
     1021 iridpmewwe svewdypnak evlrpwlnly
//
LOCUS       XP_016714682            1050 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein At4g10780 [Gossypium hirsutum].
ACCESSION   XP_016714682
VERSION     XP_016714682.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714682.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1050
                     /product="putative disease resistance protein At4g10780"
                     /calculated_mol_wt=120037
     Region          147..380
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <490..>673
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          516..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1050
                     /gene="LOC107928037"
                     /coded_by="XM_016859193.2:362..3514"
                     /db_xref="GeneID:107928037"
ORIGIN      
        1 melvgpicev lkclgdptct yiehhrklkd rmndlqerlv rlnamkkdve rrinaelrwg
       61 rllreevekw lldvqtvnnt mrdidermqn vscfsrarlg kriaqtveqv egiiergrfp
      121 ealvidnpst vgvpfqsehl egeimviedi wnylmsdeig migvcgmggi gkttivkhiy
      181 yqllketkpl fdkiiwvtvs kelnipklqq nlanamnivg lpeseperva vlmdklgqrr
      241 yvlilddvwk efslaevgip kptssngskl vltsrsidvc isldckvvkv pplsneesmn
      301 lflehagrgv lkvpslkqil ddvvkecdgl plaiaviags mkgiydvaew rnalrelrdh
      361 vrsvkgadve iyerlkfsfd rlgdlkiqsc flycslyped yiipreelie ywideeflgt
      421 gsrqelydkg htilnrlenn cllekagtdt vkmhdvmrdt alyikgsgsr fkvqsgnglk
      481 elpskqewge dlekvsfmvn nvseipphls pnceilstll lqnnkcleri sesffqhmhs
      541 lsildlsyts ikqlpnsvsn lqtlialvlr gcnklryvps leklkalrkl nlrdtameev
      601 pkglemlvnl tyldlstesl kefpmailpq lsclqylify sksctvkldg seaarlrkle
      661 kfegrfnelt dfndytdsir gqsltsyllv mappeakfkv kegtrklklk ydgpgditvp
      721 klmkmiealq gveyvaikei ngqvkvkvtg drtdvtltky idlqqlslgp nrrgfrsvlh
      781 kevilsgcqi grdpvilptd lmllrifesh nvrslsdisi ffqqasqlrf csvedckgie
      841 sildssysns lcsplenley lwlerldnlh vlikleapls isrslpllgi fshlksfvik
      901 kclnmkrlfp fklahdlqyl enlvvcdcvq meeiisseee nhkgngintp mkfsfpnlre
      961 lrlknlpelk sicssnremv cnslmkievk kctnlkrmpl ylplfqdthq sapsahpfll
     1021 iridpmewwe svewdypnak evlrpwlnly
//
LOCUS       XP_040942753            1050 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein At4g10780 [Gossypium hirsutum].
ACCESSION   XP_040942753
VERSION     XP_040942753.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086819.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1050
                     /product="putative disease resistance protein At4g10780"
                     /calculated_mol_wt=120037
     Region          147..380
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <490..>673
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          516..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1050
                     /gene="LOC107928037"
                     /coded_by="XM_041086819.1:490..3642"
                     /db_xref="GeneID:107928037"
ORIGIN      
        1 melvgpicev lkclgdptct yiehhrklkd rmndlqerlv rlnamkkdve rrinaelrwg
       61 rllreevekw lldvqtvnnt mrdidermqn vscfsrarlg kriaqtveqv egiiergrfp
      121 ealvidnpst vgvpfqsehl egeimviedi wnylmsdeig migvcgmggi gkttivkhiy
      181 yqllketkpl fdkiiwvtvs kelnipklqq nlanamnivg lpeseperva vlmdklgqrr
      241 yvlilddvwk efslaevgip kptssngskl vltsrsidvc isldckvvkv pplsneesmn
      301 lflehagrgv lkvpslkqil ddvvkecdgl plaiaviags mkgiydvaew rnalrelrdh
      361 vrsvkgadve iyerlkfsfd rlgdlkiqsc flycslyped yiipreelie ywideeflgt
      421 gsrqelydkg htilnrlenn cllekagtdt vkmhdvmrdt alyikgsgsr fkvqsgnglk
      481 elpskqewge dlekvsfmvn nvseipphls pnceilstll lqnnkcleri sesffqhmhs
      541 lsildlsyts ikqlpnsvsn lqtlialvlr gcnklryvps leklkalrkl nlrdtameev
      601 pkglemlvnl tyldlstesl kefpmailpq lsclqylify sksctvkldg seaarlrkle
      661 kfegrfnelt dfndytdsir gqsltsyllv mappeakfkv kegtrklklk ydgpgditvp
      721 klmkmiealq gveyvaikei ngqvkvkvtg drtdvtltky idlqqlslgp nrrgfrsvlh
      781 kevilsgcqi grdpvilptd lmllrifesh nvrslsdisi ffqqasqlrf csvedckgie
      841 sildssysns lcsplenley lwlerldnlh vlikleapls isrslpllgi fshlksfvik
      901 kclnmkrlfp fklahdlqyl enlvvcdcvq meeiisseee nhkgngintp mkfsfpnlre
      961 lrlknlpelk sicssnremv cnslmkievk kctnlkrmpl ylplfqdthq sapsahpfll
     1021 iridpmewwe svewdypnak evlrpwlnly
//
LOCUS       XP_040942754            1050 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein At4g10780 [Gossypium hirsutum].
ACCESSION   XP_040942754
VERSION     XP_040942754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086820.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1050
                     /product="putative disease resistance protein At4g10780"
                     /calculated_mol_wt=120037
     Region          147..380
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <490..>673
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          516..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1050
                     /gene="LOC107928037"
                     /coded_by="XM_041086820.1:573..3725"
                     /db_xref="GeneID:107928037"
ORIGIN      
        1 melvgpicev lkclgdptct yiehhrklkd rmndlqerlv rlnamkkdve rrinaelrwg
       61 rllreevekw lldvqtvnnt mrdidermqn vscfsrarlg kriaqtveqv egiiergrfp
      121 ealvidnpst vgvpfqsehl egeimviedi wnylmsdeig migvcgmggi gkttivkhiy
      181 yqllketkpl fdkiiwvtvs kelnipklqq nlanamnivg lpeseperva vlmdklgqrr
      241 yvlilddvwk efslaevgip kptssngskl vltsrsidvc isldckvvkv pplsneesmn
      301 lflehagrgv lkvpslkqil ddvvkecdgl plaiaviags mkgiydvaew rnalrelrdh
      361 vrsvkgadve iyerlkfsfd rlgdlkiqsc flycslyped yiipreelie ywideeflgt
      421 gsrqelydkg htilnrlenn cllekagtdt vkmhdvmrdt alyikgsgsr fkvqsgnglk
      481 elpskqewge dlekvsfmvn nvseipphls pnceilstll lqnnkcleri sesffqhmhs
      541 lsildlsyts ikqlpnsvsn lqtlialvlr gcnklryvps leklkalrkl nlrdtameev
      601 pkglemlvnl tyldlstesl kefpmailpq lsclqylify sksctvkldg seaarlrkle
      661 kfegrfnelt dfndytdsir gqsltsyllv mappeakfkv kegtrklklk ydgpgditvp
      721 klmkmiealq gveyvaikei ngqvkvkvtg drtdvtltky idlqqlslgp nrrgfrsvlh
      781 kevilsgcqi grdpvilptd lmllrifesh nvrslsdisi ffqqasqlrf csvedckgie
      841 sildssysns lcsplenley lwlerldnlh vlikleapls isrslpllgi fshlksfvik
      901 kclnmkrlfp fklahdlqyl enlvvcdcvq meeiisseee nhkgngintp mkfsfpnlre
      961 lrlknlpelk sicssnremv cnslmkievk kctnlkrmpl ylplfqdthq sapsahpfll
     1021 iridpmewwe svewdypnak evlrpwlnly
//
LOCUS       XP_040942755             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942755
VERSION     XP_040942755.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086821.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18999
     CDS             1..170
                     /gene="LOC121213767"
                     /coded_by="XM_041086821.1:81..593"
                     /db_xref="GeneID:121213767"
ORIGIN      
        1 mappeakfkv kegtrklklk ydgpgditvp klrkmikafk vegvefvaik eengqvkvig
       61 dmdpvrilmk lrkyihvdil svgpnrrsfr sllpkkevil sgcqigrdpv ilptdlmllr
      121 ifeshnvrsl sdislffqqa sqlrfcsved ckgiesilds slsnslcspl
//
LOCUS       XP_016714714             177 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 4 [Gossypium hirsutum].
ACCESSION   XP_016714714
VERSION     XP_016714714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="dirigent protein 4"
                     /calculated_mol_wt=19071
     Region          39..176
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..177
                     /gene="LOC107928074"
                     /coded_by="XM_016859225.2:95..628"
                     /db_xref="GeneID:107928074"
ORIGIN      
        1 mkgtlvltwi liiylsqiav qsqyyseilp ydpepvkvtn lhfylhetln gqnptavnia
       61 qanitnnssv pfatlaavdd ilkigpedns evignaqglg lllagntttg vmysdfgftv
      121 gkfngssisi fsrntiiepg revavvggrg kfrmakgfal lttyflnata viiefny
//
LOCUS       XP_016714779             491 aa            linear   PLN 06-AUG-2024
DEFINITION  tyrosine--tRNA ligase, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016714779
VERSION     XP_016714779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..491
                     /product="tyrosine--tRNA ligase,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=54504
     Region          61..491
                     /region_name="TyrS"
                     /note="Tyrosyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0162"
                     /db_xref="CDD:439932"
     CDS             1..491
                     /gene="LOC107928115"
                     /coded_by="XM_016859290.2:157..1632"
                     /db_xref="GeneID:107928115"
ORIGIN      
        1 masrtflcfn hgkfllpftt tkfipasrrp ikslsfssvs cslntpqptv epkfqmgstp
       61 nvvkileerg llesitnenl rlvcsdqtag plkvycgfdp taeslhlgnl lglivlswfq
      121 rcghravali ggatgrigdp sgksqerpel dlesleknia gimeivnkil sknanlgseq
      181 nsnfvilnny dwwkevrlld flkqvgryar vgsmmskesv kkrleseqgm syteftyqll
      241 qgydflylfk negvnvqigg sdqwgnitag telirkilqa egaygltfpl llksdgtkfg
      301 ksedgaiwls psmlspykfy qyffsvpdad vvrflkiltf lnmeeinele samkkpgyvp
      361 ntaqrklaee itrfvhgedg ltealkatea lrpgsetkld wetiegiaed vpscslpyte
      421 vlnlsivdls vssglfesks aarrllkqgg iylnnnrvdn eskrieaedi vdgkvlllsa
      481 gkknkvvvri s
//
LOCUS       XP_016714698             360 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SRG1 [Gossypium hirsutum].
ACCESSION   XP_016714698
VERSION     XP_016714698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..360
                     /product="protein SRG1"
                     /calculated_mol_wt=40545
     Region          12..357
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..360
                     /gene="LOC107928051"
                     /coded_by="XM_016859209.2:24..1106"
                     /db_xref="GeneID:107928051"
ORIGIN      
        1 mernskasnv gssvlvpsvq elakqplsai pdrylrpele gdavahggdq vleipvidmq
       61 rlvseesmns eihkldfack ewgffqlvnh gvnlrllekv kaeleelfkl pmeekkklwq
      121 cpgnvegfgq afvvsegqkl dwcdlfnmlt hplhlrnprl fpnlplplrd imelytseln
      181 klstaileki veaigmktee mkelvgegrq tirvnyyppc hlsdqvlglt phsdatliti
      241 llqlndvhgl qvrkdgnwvp vkplpnafil nvgdileilt ngtyrsiehr atvnpkkerl
      301 sfatfigvga ggeigpapsl vskqksamfr rvkveeyykg mfsrklqgks yldymkieqd
//
LOCUS       XP_016714781             357 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SRG1 [Gossypium hirsutum].
ACCESSION   XP_016714781
VERSION     XP_016714781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..357
                     /product="protein SRG1"
                     /calculated_mol_wt=40620
     Region          1..354
                     /region_name="PLN02216"
                     /note="protein SRG1"
                     /db_xref="CDD:215129"
     CDS             1..357
                     /gene="LOC107928116"
                     /coded_by="XM_016859292.2:338..1411"
                     /db_xref="GeneID:107928116"
ORIGIN      
        1 meseasnvgs sllvpsvqel akqplsaipy rylrpeleqd vvadsggpvl eipvidmqkl
       61 vseesinsel dkldfackew gffqlvnhgv sltllekvnt qirdffnlpk eeknkfwqyp
      121 gqvegfgqsf vvsedqkldw adifymltlp lhlrkphlfn nlplplrdtl esysselnnl
      181 fkailakmve alsmkteeme kfigegrqai rnyyppchlp kqvigltphs dasiitillq
      241 lneveglqir kdgkwvtvkp lpnafivnvg dlleiitngt yrsiehcatv nsererlsfa
      301 tfcgprndge igparslise qrpamfrrvk vkeyykglfa rklqgksyld fmriqhd
//
LOCUS       XP_016714764             403 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sodium/metabolite cotransporter BASS1, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016714764
VERSION     XP_016714764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..403
                     /product="probable sodium/metabolite cotransporter BASS1,
                     chloroplastic"
                     /calculated_mol_wt=43187
     Region          103..395
                     /region_name="YfeH"
                     /note="Predicted Na+-dependent transporter YfeH [General
                     function prediction only]; COG0385"
                     /db_xref="CDD:440154"
     CDS             1..403
                     /gene="LOC107928104"
                     /coded_by="XM_016859275.2:113..1324"
                     /db_xref="GeneID:107928104"
ORIGIN      
        1 mqsslpcpha tttyfkslek prprylsypn lllsfprpsn sssfgltlrs qshkqlpnrp
       61 insltsnrfq ihcgissnsy nannkksvrd wiewvgevis tafplwvslg cllglfkpss
      121 fswvtprwsi fgltltmlgm gmtltlddlr galampkeli sgfvlqysvm plsgyfvskl
      181 lnlpshyaag lilvgccpgg tasnivtyla rgnvalsvlm taastlsavi mtpsltsmla
      241 gkyvpvdaaa llnstlqvvl lpvlggafln qyfhgfvkfv splmpsiavg tvgvlcgnai
      301 aesssailas glqvvlassl lhasgfffgy vlsrmlrldv assrtisiev gmqnsvlgvf
      361 lathhfqnpl tavpcavssv chsifgsila giwrrdvpkq nqe
//
LOCUS       XP_016714768             317 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FLX-like 1 [Gossypium hirsutum].
ACCESSION   XP_016714768
VERSION     XP_016714768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="protein FLX-like 1"
                     /calculated_mol_wt=35071
     Region          <75..>247
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..317
                     /gene="LOC107928105"
                     /coded_by="XM_016859279.2:196..1149"
                     /db_xref="GeneID:107928105"
ORIGIN      
        1 msgrnrgppp ipmkgpphag llppvhehpy arglgpmpph pvlldeirep qfvlgprgfp
       61 phpaiieerl gvqlqeiqal ladnqrlaat hvalkqelea aqhelkqmsh yadslraekd
      121 vqmremyeks vrleadlrel eamraelvkv ngdikqlsav kqdltgqvqi msqdltrltg
      181 elqqapvlka eienlkqelq raraaieyek kgyaenyehg qvmekklism areleklrae
      241 vanaekrtra gggtganpav sgynanygnp eagytgntyh vnygmnpvqg gvdvyrqygp
      301 asgswgaydm qraqghr
//
LOCUS       XP_016714769             317 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FLX-like 1 [Gossypium hirsutum].
ACCESSION   XP_016714769
VERSION     XP_016714769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="protein FLX-like 1"
                     /calculated_mol_wt=35071
     Region          <75..>247
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..317
                     /gene="LOC107928105"
                     /coded_by="XM_016859280.2:196..1149"
                     /db_xref="GeneID:107928105"
ORIGIN      
        1 msgrnrgppp ipmkgpphag llppvhehpy arglgpmpph pvlldeirep qfvlgprgfp
       61 phpaiieerl gvqlqeiqal ladnqrlaat hvalkqelea aqhelkqmsh yadslraekd
      121 vqmremyeks vrleadlrel eamraelvkv ngdikqlsav kqdltgqvqi msqdltrltg
      181 elqqapvlka eienlkqelq raraaieyek kgyaenyehg qvmekklism areleklrae
      241 vanaekrtra gggtganpav sgynanygnp eagytgntyh vnygmnpvqg gvdvyrqygp
      301 asgswgaydm qraqghr
//
LOCUS       XP_016714766             317 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FLX-like 1 [Gossypium hirsutum].
ACCESSION   XP_016714766
VERSION     XP_016714766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859277.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="protein FLX-like 1"
                     /calculated_mol_wt=35071
     Region          <75..>247
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..317
                     /gene="LOC107928105"
                     /coded_by="XM_016859277.2:256..1209"
                     /db_xref="GeneID:107928105"
ORIGIN      
        1 msgrnrgppp ipmkgpphag llppvhehpy arglgpmpph pvlldeirep qfvlgprgfp
       61 phpaiieerl gvqlqeiqal ladnqrlaat hvalkqelea aqhelkqmsh yadslraekd
      121 vqmremyeks vrleadlrel eamraelvkv ngdikqlsav kqdltgqvqi msqdltrltg
      181 elqqapvlka eienlkqelq raraaieyek kgyaenyehg qvmekklism areleklrae
      241 vanaekrtra gggtganpav sgynanygnp eagytgntyh vnygmnpvqg gvdvyrqygp
      301 asgswgaydm qraqghr
//
LOCUS       XP_016714725             371 aa            linear   PLN 06-AUG-2024
DEFINITION  trifunctional UDP-glucose
            4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose
            3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Gossypium
            hirsutum].
ACCESSION   XP_016714725
VERSION     XP_016714725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="trifunctional UDP-glucose
                     4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose
                     3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1"
                     /calculated_mol_wt=41916
     Region          1..>370
                     /region_name="PLN02260"
                     /note="probable rhamnose biosynthetic enzyme"
                     /db_xref="CDD:215146"
     CDS             1..371
                     /gene="LOC107928086"
                     /coded_by="XM_016859236.2:8..1123"
                     /db_xref="GeneID:107928086"
ORIGIN      
        1 matykprnil itgaagfias hvtnrlirny psykivaldk ldycsnlknl hpsksspnfk
       61 fvegdigsad lvnyllftes idtimhfaaq thvdnsfgns feftknniyg thvlleackv
      121 tgqirrfihv stdevygetd edavvgnhea sqllpsnpys atkagaemlv maygrsyglp
      181 vittrgnnvy gpnqfpekli pkfillamrg mvlpihgdgs nvrsylyced vaeafevilh
      241 rgevghvyni gtkkerrvid vakdicklfl mdpeksiefv enrpfndqry flddqklknl
      301 gwserviwee glkktidwyt khpnwwgdvs gallphprml mipggrhfdf eelnrmshvn
      361 gpklpngksk l
//
LOCUS       XP_016714733             968 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016714733
VERSION     XP_016714733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..968
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X1"
                     /calculated_mol_wt=109211
     Region          34..968
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..968
                     /gene="LOC107928095"
                     /coded_by="XM_016859244.2:16..2922"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mlmwpylsrt hggtcrksrs flsafvidfl iermpgnkyn gnsphiptrt erllrdrelr
       61 eqrksnrtsh ldevidirkg aevsengprf regdnsraaf vekyledaav araltegcer
      121 qdgrpfrqrl lvvanrlpvs avrrgedsws leisagglvt allgvkefet rwigwagvnv
      181 pdeigqkalt kalaekwcip vfldeeivhq yyngycnnil wplfhylglp qedrlattrs
      241 fqsqfaaykk anqmfadvvn mhyeegdvvw chdyhlmylp eclknhnnnm kvgwflhtpf
      301 psseihrtlp srsellrsvl aadlvgfhty dyarhfvsac trilgiegtp egvedqgrlt
      361 rvaafpigid slrfqnallv pqvqehikel kerfsgrkvm lgvdrldmik gipqkilafe
      421 kfleenpnwr dkvvllqiav ptrtdvpeyq kltsqvheiv gringrfgsl tavpihhldr
      481 sldfhalcal yavtdvalvt slrdgmnlvs yefvacqeak kgvlilsefa gaaqslgaga
      541 ilvnpwnite vaasiaqaln msaeerekrh qhnfhhvtkh taqewaemfv selndtvvea
      601 qlrtskeppe lpqndavery llsgnrllil gfnstltepv dtsgnrsdqi reknpnlhpe
      661 lkehltalcn dkkttivvls gsksevldkn faeydmwlaa engmflrhtk gdwmttmpeh
      721 lnmewvdslk hvfeyftert prsefeirtt slvwnykyad vefgrlqard mlqhlwtgpi
      781 snasvdvvqg srsvevrpvg vtkgaaidri lgeivhntsm ttpidyvlcv ghflgkdedv
      841 ytffepelps dvnmakckpi dapklptekk apsklpaaks gpkssqtktp kpspapdkrt
      901 gnnhsggssr raspekvkek ekmawsvldl kgdnyfscav grkrtsaryl lgssddvvsf
      961 lsrlakgt
//
LOCUS       XP_016714734             963 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016714734
VERSION     XP_016714734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859245.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..963
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X2"
                     /calculated_mol_wt=108589
     Region          29..963
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..963
                     /gene="LOC107928095"
                     /coded_by="XM_016859245.2:32..2923"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 msqflessev lisillyyvf sgflliermp gnkyngnsph iptrterllr drelreqrks
       61 nrtshldevi dirkgaevse ngprfregdn sraafvekyl edaavaralt egcerqdgrp
      121 frqrllvvan rlpvsavrrg edswsleisa gglvtallgv kefetrwigw agvnvpdeig
      181 qkaltkalae kwcipvflde eivhqyyngy cnnilwplfh ylglpqedrl attrsfqsqf
      241 aaykkanqmf advvnmhyee gdvvwchdyh lmylpeclkn hnnnmkvgwf lhtpfpssei
      301 hrtlpsrsel lrsvlaadlv gfhtydyarh fvsactrilg iegtpegved qgrltrvaaf
      361 pigidslrfq nallvpqvqe hikelkerfs grkvmlgvdr ldmikgipqk ilafekflee
      421 npnwrdkvvl lqiavptrtd vpeyqkltsq vheivgring rfgsltavpi hhldrsldfh
      481 alcalyavtd valvtslrdg mnlvsyefva cqeakkgvli lsefagaaqs lgagailvnp
      541 wnitevaasi aqalnmsaee rekrhqhnfh hvtkhtaqew aemfvselnd tvveaqlrts
      601 keppelpqnd averyllsgn rllilgfnst ltepvdtsgn rsdqireknp nlhpelkehl
      661 talcndkktt ivvlsgskse vldknfaeyd mwlaaengmf lrhtkgdwmt tmpehlnmew
      721 vdslkhvfey ftertprsef eirttslvwn ykyadvefgr lqardmlqhl wtgpisnasv
      781 dvvqgsrsve vrpvgvtkga aidrilgeiv hntsmttpid yvlcvghflg kdedvytffe
      841 pelpsdvnma kckpidapkl ptekkapskl paaksgpkss qtktpkpspa pdkrtgnnhs
      901 ggssrraspe kvkekekmaw svldlkgdny fscavgrkrt saryllgssd dvvsflsrla
      961 kgt
//
LOCUS       XP_016714737             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016714737
VERSION     XP_016714737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_016859248.2:359..3166"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_016714741             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016714741
VERSION     XP_016714741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859252.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_016859252.2:251..3058"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_016714736             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016714736
VERSION     XP_016714736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_016859247.2:295..3102"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_040942759             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040942759
VERSION     XP_040942759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086825.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_041086825.1:271..3078"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_040942760             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040942760
VERSION     XP_040942760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086826.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_041086826.1:340..3147"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_016714738             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016714738
VERSION     XP_016714738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_016859249.2:263..3070"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_016714742             935 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016714742
VERSION     XP_016714742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859253.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..935
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X3"
                     /calculated_mol_wt=105309
     Region          1..935
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..935
                     /gene="LOC107928095"
                     /coded_by="XM_016859253.2:217..3024"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mpgnkyngns phiptrterl lrdrelreqr ksnrtshlde vidirkgaev sengprfreg
       61 dnsraafvek yledaavara ltegcerqdg rpfrqrllvv anrlpvsavr rgedswslei
      121 sagglvtall gvkefetrwi gwagvnvpde igqkaltkal aekwcipvfl deeivhqyyn
      181 gycnnilwpl fhylglpqed rlattrsfqs qfaaykkanq mfadvvnmhy eegdvvwchd
      241 yhlmylpecl knhnnnmkvg wflhtpfpss eihrtlpsrs ellrsvlaad lvgfhtydya
      301 rhfvsactri lgiegtpegv edqgrltrva afpigidslr fqnallvpqv qehikelker
      361 fsgrkvmlgv drldmikgip qkilafekfl eenpnwrdkv vllqiavptr tdvpeyqklt
      421 sqvheivgri ngrfgsltav pihhldrsld fhalcalyav tdvalvtslr dgmnlvsyef
      481 vacqeakkgv lilsefagaa qslgagailv npwnitevaa siaqalnmsa eerekrhqhn
      541 fhhvtkhtaq ewaemfvsel ndtvveaqlr tskeppelpq ndaverylls gnrllilgfn
      601 stltepvdts gnrsdqirek npnlhpelke hltalcndkk ttivvlsgsk sevldknfae
      661 ydmwlaaeng mflrhtkgdw mttmpehlnm ewvdslkhvf eyftertprs efeirttslv
      721 wnykyadvef grlqardmlq hlwtgpisna svdvvqgsrs vevrpvgvtk gaaidrilge
      781 ivhntsmttp idyvlcvghf lgkdedvytf fepelpsdvn makckpidap klptekkaps
      841 klpaaksgpk ssqtktpkps papdkrtgnn hsggssrras pekvkekekm awsvldlkgd
      901 nyfscavgrk rtsaryllgs sddvvsflsr lakgt
//
LOCUS       XP_040942761             774 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040942761
VERSION     XP_040942761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086827.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..774
                     /product="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming] 1 isoform X4"
                     /calculated_mol_wt=87294
     Region          4..774
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     CDS             1..774
                     /gene="LOC107928095"
                     /coded_by="XM_041086827.1:259..2583"
                     /db_xref="GeneID:107928095"
ORIGIN      
        1 mqwcipvfld eeivhqyyng ycnnilwplf hylglpqedr lattrsfqsq faaykkanqm
       61 fadvvnmhye egdvvwchdy hlmylpeclk nhnnnmkvgw flhtpfpsse ihrtlpsrse
      121 llrsvlaadl vgfhtydyar hfvsactril giegtpegve dqgrltrvaa fpigidslrf
      181 qnallvpqvq ehikelkerf sgrkvmlgvd rldmikgipq kilafekfle enpnwrdkvv
      241 llqiavptrt dvpeyqklts qvheivgrin grfgsltavp ihhldrsldf halcalyavt
      301 dvalvtslrd gmnlvsyefv acqeakkgvl ilsefagaaq slgagailvn pwnitevaas
      361 iaqalnmsae erekrhqhnf hhvtkhtaqe waemfvseln dtvveaqlrt skeppelpqn
      421 daveryllsg nrllilgfns tltepvdtsg nrsdqirekn pnlhpelkeh ltalcndkkt
      481 tivvlsgsks evldknfaey dmwlaaengm flrhtkgdwm ttmpehlnme wvdslkhvfe
      541 yftertprse feirttslvw nykyadvefg rlqardmlqh lwtgpisnas vdvvqgsrsv
      601 evrpvgvtkg aaidrilgei vhntsmttpi dyvlcvghfl gkdedvytff epelpsdvnm
      661 akckpidapk lptekkapsk lpaaksgpks sqtktpkpsp apdkrtgnnh sggssrrasp
      721 ekvkekekma wsvldlkgdn yfscavgrkr tsaryllgss ddvvsflsrl akgt
//
LOCUS       XP_016714787             214 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714787
VERSION     XP_016714787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..214
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=24503
     CDS             1..214
                     /gene="LOC107928121"
                     /coded_by="XM_016859298.2:16..660"
                     /db_xref="GeneID:107928121"
ORIGIN      
        1 mygpllvsfl nclgsrhiyk gklksqlati tsccrwllla egnmnrvsqn sslfrrllht
       61 lsrddgpset lkkkvpeiek trkrrnpkka qlfvevpesr sfldtatlpm ylavagialf
      121 akllmmhdes ksqemierki knappgqgti rmltreewee irevrprtpf esklarpnak
      181 irtgeplhme dmknwtidil tdaltraenc skhk
//
LOCUS       XP_016714789             206 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714789
VERSION     XP_016714789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859300.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..206
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23324
     CDS             1..206
                     /gene="LOC107928121"
                     /coded_by="XM_016859300.2:38..658"
                     /db_xref="GeneID:107928121"
ORIGIN      
        1 mghssfpfsi vsalvistke ssslslrrsp vaagnmnrvs qnsslfrrll htlsrddgps
       61 etlkkkvpei ektrkrrnpk kaqlfvevpe srsfldtatl pmylavagia lfakllmmhd
      121 esksqemier kiknappgqg tirmltreew eeirevrprt pfesklarpn akirtgeplh
      181 medmknwtid iltdaltrae ncskhk
//
LOCUS       XP_040942762             174 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942762
VERSION     XP_040942762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086828.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..174
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=20053
     CDS             1..174
                     /gene="LOC107928121"
                     /coded_by="XM_041086828.1:283..807"
                     /db_xref="GeneID:107928121"
ORIGIN      
        1 msnmnrvsqn sslfrrllht lsrddgpset lkkkvpeiek trkrrnpkka qlfvevpesr
       61 sfldtatlpm ylavagialf akllmmhdes ksqemierki knappgqgti rmltreewee
      121 irevrprtpf esklarpnak irtgeplhme dmknwtidil tdaltraenc skhk
//
LOCUS       XP_016714791             174 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714791
VERSION     XP_016714791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859302.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..174
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=20053
     CDS             1..174
                     /gene="LOC107928121"
                     /coded_by="XM_016859302.2:139..663"
                     /db_xref="GeneID:107928121"
ORIGIN      
        1 msnmnrvsqn sslfrrllht lsrddgpset lkkkvpeiek trkrrnpkka qlfvevpesr
       61 sfldtatlpm ylavagialf akllmmhdes ksqemierki knappgqgti rmltreewee
      121 irevrprtpf esklarpnak irtgeplhme dmknwtidil tdaltraenc skhk
//
LOCUS       XP_016714793             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714793
VERSION     XP_016714793.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859304.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=19721
     CDS             1..171
                     /gene="LOC107928121"
                     /coded_by="XM_016859304.2:280..795"
                     /db_xref="GeneID:107928121"
ORIGIN      
        1 mnrvsqnssl frrllhtlsr ddgpsetlkk kvpeiektrk rrnpkkaqlf vevpesrsfl
       61 dtatlpmyla vagialfakl lmmhdesksq emierkikna ppgqgtirml treeweeire
      121 vrprtpfesk larpnakirt geplhmedmk nwtidiltda ltraencskh k
//
LOCUS       XP_016714794             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714794
VERSION     XP_016714794.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859305.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=19721
     CDS             1..171
                     /gene="LOC107928121"
                     /coded_by="XM_016859305.2:350..865"
                     /db_xref="GeneID:107928121"
ORIGIN      
        1 mnrvsqnssl frrllhtlsr ddgpsetlkk kvpeiektrk rrnpkkaqlf vevpesrsfl
       61 dtatlpmyla vagialfakl lmmhdesksq emierkikna ppgqgtirml treeweeire
      121 vrprtpfesk larpnakirt geplhmedmk nwtidiltda ltraencskh k
//
LOCUS       XP_040942763             104 aa            linear   PLN 06-AUG-2024
DEFINITION  trifunctional UDP-glucose
            4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose
            3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like [Gossypium
            hirsutum].
ACCESSION   XP_040942763
VERSION     XP_040942763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086829.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..104
                     /product="trifunctional UDP-glucose
                     4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose
                     3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like"
                     /calculated_mol_wt=11820
     Region          <1..>93
                     /region_name="PLN02260"
                     /note="probable rhamnose biosynthetic enzyme"
                     /db_xref="CDD:215146"
     CDS             1..104
                     /gene="LOC121213772"
                     /coded_by="XM_041086829.1:32..346"
                     /db_xref="GeneID:121213772"
ORIGIN      
        1 mrgktlpihg dgsnvrsyly cedvaeafev ilhkgevghv ynigtkkerr vidvakdick
       61 lfsmdpetsi kfvenrpfnd qryflddqkl knldgpsely gkrg
//
LOCUS       XP_040942764            1279 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942764
VERSION     XP_040942764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086830.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1279
                     /product="uncharacterized protein"
                     /calculated_mol_wt=143970
     Region          <35..>198
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          38..58
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          59..81
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          82..101
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          102..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          584..615
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          643..668
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          669..702
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          707..734
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          735..760
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          796..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1279
                     /gene="LOC107928070"
                     /coded_by="XM_041086830.1:92..3931"
                     /db_xref="GeneID:107928070"
ORIGIN      
        1 miksrlelln rssesckais lldseeknfp drlilsklei lllknckvqg tcflgmtelk
       61 vlslegstgv islyalrflp klralhlenf edfmflgnli tleilslrgs kfeglanelg
      121 rlkdlkmldl tncklfssss pnviqrlsql eelylsnttn diylvikslt rltrlnlwvs
      181 slhfppdfef pelekfnici gydgilflhs fdgrmslifs aarsldinqe vfpynavsql
      241 lgnleslvvs gikdeyvecl tnktqqkvsv smilrnlkqv sigycsnlkv vfqmeeveen
      301 eapllsnlki lnleglpdls ciwelptqhv rleslvelti khcprlkslf slslaqslvl
      361 leklkifycf elkqivtele gdegeissai nshtslcfpk ltklyisicd gleyifptsl
      421 ashglqgltl gihwcpklkq vfrvandsml qyqqslrsls sfsitdcpll tdsvvhleae
      481 kasikgvrls afkdsfktsk elrlsdikdh nlvpeanedg lngvtslqle ncedleclvd
      541 ttatatkngp tsafthletl fiedmdglea lckgqppqgf lknlkhlevr eccklqvlge
      601 llhdgeqnqe hplsnlqslk lyqlpalrwi fkgsphsftl qilkvvying cgklksllsp
      661 sliqslvlle qfeiqhcnel etlfadpeid geieskpssl plclpklktl siegcakley
      721 vvpkpsslpl rlpklntlsi edcakleyvv pitlaqglpa leslsvsccd elkqvfgmpn
      781 eqdgvqhhgs lllpslqyle ldglrnltsf vpqnyivkap slkrlgandc pkvinipiqq
      841 annqleltiq ktglsvfkel lcntndlsly nigdhknlvp dlidlehldg ltslciygwq
      901 dgeclvdisq ammdfkyndq spkcflqnlk ilrvsdckdl skifrmddgi esnayylsnl
      961 eilgvygcss leyvfphasv gvfsslrevy lfglrnlrsi vggnnfleap ileilhiwkc
     1021 svfanftfpk evkkcgslka ltflmedids edvnlsdtvn tqliqkspdf eyitlgnfeq
     1081 lfqlqggnii sslekmelfn virlrdiwkg piqvatnlre irvhccnnlt yifpetlipy
     1141 lpqlsilkik scvnlkkiig nddilessss sqgpqlemkm vfpqlkeiel enlsklesfs
     1201 pmgyhlefpc lhsldikecs kmitsfsady ltltvhaktd qasqlndtsp srediiwkrr
     1261 rptslpqyke eaeeispfq
//
LOCUS       XP_016714712             501 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714712
VERSION     XP_016714712.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714712.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..501
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57036
     Region          152..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          209..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          235..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          261..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          316..340
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          341..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          408..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..501
                     /gene="LOC107928071"
                     /coded_by="XM_016859223.2:2515..4020"
                     /db_xref="GeneID:107928071"
ORIGIN      
        1 mpyeqngveh hsslllpslq dleldwlrnl tsfvpqnyiv kapslksvka nvcskvinfp
       61 iqqannqlel tlketglsaf kellcntkdl vlhnigdhkn lvpdlvdleh ldgltsisin
      121 kwssgeclvd asqimmnfkc ngqppkcflq nlkilrvvdc ekiseifrid dgiesnaryl
      181 pnlkfveire cpsleyffph tsiggfshle eiklvglrtl ksivgennfl eaptlkilyi
      241 rgcsaftnft fhkefkkcvf lkelffsmed tgsedvnlcd mvntqlrqks pdfeyvtlgn
      301 feqlfqlqgg niisslekme lfnvirlqdi wkgpihvatn lrelrvrhcn nltdifpvmf
      361 iphlpqlsil niascenlkq iignddilas ssssqgpqle mkmvfpqlkk ielenlskle
      421 sfnpvgyhle ipclhsldik kcskmitsfs adyltltvha ktdqasqlnd ispsrediiw
      481 errrptllpq ykeakeispf q
//
LOCUS       XP_016714722             435 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190-like [Gossypium hirsutum].
ACCESSION   XP_016714722
VERSION     XP_016714722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..435
                     /product="disease resistance protein At4g27190-like"
                     /calculated_mol_wt=49499
     Region          45..>294
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          171..403
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..435
                     /gene="LOC107928083"
                     /coded_by="XM_016859233.2:115..1422"
                     /db_xref="GeneID:107928083"
ORIGIN      
        1 mgsewglsaa sglvaplfvd ylvkpierri rylfrfhkiv qelhqnqqdl aaketqvkdd
       61 veeaklqirt qviydqvdew ptkaenalkd vkvldseiee nkrcfclcpn wcwryqlsqe
      121 ienktleiad lvkksefkrv ghraklpsld lvtskdnvdl kssgaafnki mealkddivk
      181 kigvwgmggv gkttlvrnvs gkvrgfdrvi mvtvsetvdi ekiqnkiadd ldlkfgknte
      241 ggkatelwsr lsngkflvii ddlwkewndd gdlrkigipl vkdekgckii lttrnynvcq
      301 hmeceetiql kvledgeawt lfemnagikk adsrvigeak kiakeckglp laivtlakal
      361 kgkaldrwkd arkklersgl meipsiqter eknayislki syehlkdkms qtcfllcaly
      421 peddlinved lmrya
//
LOCUS       XP_016714762             184 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714762
VERSION     XP_016714762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21156
     CDS             1..184
                     /gene="LOC107928102"
                     /coded_by="XM_016859273.2:159..713"
                     /db_xref="GeneID:107928102"
ORIGIN      
        1 melfnvirlr diwkgpiqva tnlreirvhc cnnltyifpe tlipylpqls ilkikscvnl
       61 kkiignddil asssslqgpq lkmkmvfpql kkielenlsk lesfspvgyh lefpclhsld
      121 ikkcskmits fsadyltmtv hakidqasql ndtspsredi iwerrrftll pqykeeaeei
      181 spfq
//
LOCUS       XP_040942765             181 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g43740 [Gossypium hirsutum].
ACCESSION   XP_040942765
VERSION     XP_040942765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086831.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="probable disease resistance protein At5g43740"
                     /calculated_mol_wt=20062
     Region          1..177
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..181
                     /gene="LOC121213773"
                     /coded_by="XM_041086831.1:1054..1599"
                     /db_xref="GeneID:121213773"
ORIGIN      
        1 mggvgkttlv rnvggevkgf drvimvtvse tldiekmqnk iaddidlnfe kktgevkaae
       61 lwsrlsngkf lvilddlwke wnddgdlrki giplvkdekg ckiilttrny nvcqhmecee
      121 tvqvkvledd eawtlfemna glkkadsrvi geakkivkec kglplaivtl aralkskgpn
      181 s
//
LOCUS       XP_040942766             168 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase subunit d, mitochondrial isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942766
VERSION     XP_040942766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086832.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..168
                     /product="ATP synthase subunit d, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=19254
     Region          14..142
                     /region_name="Mt_ATP-synt_D"
                     /note="ATP synthase D chain, mitochondrial (ATP5H);
                     pfam05873"
                     /db_xref="CDD:461764"
     CDS             1..168
                     /gene="LOC107944975"
                     /coded_by="XM_041086832.1:16..522"
                     /db_xref="GeneID:107944975"
ORIGIN      
        1 msglgkkvvd vvfkasknid wegmakllvs dearkefatl rrtfdevnst lqtkfsqepe
       61 pidweyyrkg igsrlvdmyk eayesveipk fvdtvtpqyk pkfdalliel keaeekslke
      121 serlekeiae vqelkvinkt mpkcvllcsk sqllnflsff mnskisap
//
LOCUS       XP_040942767             165 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase subunit d, mitochondrial isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942767
VERSION     XP_040942767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086833.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..165
                     /product="ATP synthase subunit d, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=19257
     Region          14..154
                     /region_name="Mt_ATP-synt_D"
                     /note="ATP synthase D chain, mitochondrial (ATP5H);
                     pfam05873"
                     /db_xref="CDD:461764"
     CDS             1..165
                     /gene="LOC107944975"
                     /coded_by="XM_041086833.1:101..598"
                     /db_xref="GeneID:107944975"
ORIGIN      
        1 msglgkkvvd vvfkasknid wegmakllvs dearkefatl rrtfdevnst lqtkfsqepe
       61 pidweyyrkg igsrlvdmyk eayesveipk fvdtvtpqyk pkfdalliel keaeekslke
      121 serlekeiae vqelkqnist mtadeyfekh pelkkkfdde irndy
//
LOCUS       XP_040942768             401 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942768
VERSION     XP_040942768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086834.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45699
     Region          164..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          190..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          216..255
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          256..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          294..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          333..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..401
                     /gene="LOC121213775"
                     /coded_by="XM_041086834.1:213..1418"
                     /db_xref="GeneID:121213775"
ORIGIN      
        1 mmgfkyngep segcfpnlks lrvkncvnll kvfeiaegly nqeenqapqi lskleylels
       61 ylldlrqivk gptryvnlqs lkvldiircs elkslfplsv tqtlrsleel nihecgelvh
      121 vfmeleeeee eddddddddd dddddddddd dggiesdalc lpnlktveit qcprlkyvfp
      181 lalargfprl qklqlvglrs lrafvarnnf leapalenlc ihgssalsnf tfqkeanncf
      241 psklqggdfm pnpkkmelfn liwlrdnlre livhynnnlt yifpvmliqh lsqlsileik
      301 sceklkgiig nddilasssq gtrlemkmvf pqlkqivled lpklesfspv gyqlefpcld
      361 llnikqcski itsftadylt ltvhaktnqv silptlfyyc f
//
LOCUS       XP_016714685             311 aa            linear   PLN 06-AUG-2024
DEFINITION  NADH kinase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714685
VERSION     XP_016714685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859196.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="NADH kinase isoform X1"
                     /calculated_mol_wt=34267
     Region          12..308
                     /region_name="PLN02929"
                     /note="NADH kinase"
                     /db_xref="CDD:215502"
     CDS             1..311
                     /gene="LOC107928043"
                     /coded_by="XM_016859196.2:105..1040"
                     /db_xref="GeneID:107928043"
ORIGIN      
        1 marrklllll kpfdvyqvtq snavsrftnp rifhyidnrc kvhkeaikvc qkilqqkpid
       61 wkpifrnnls qpihnvdlvv tvggdgtllq ashflddsip vlglnsdptq aeevekfsne
      121 fdatrstgyl caatvknfeq vldgfledqi vpsklsrisv svnskvlptc alndiliahp
      181 cpatvsrfsf kirgddktcs plvncrssgl ristaagsta amhsaggfpm pilsrdlqym
      241 vrepisqgpa isrlmhglik sdqsmdaswf skegfvyfdg shvfhtiqng dtieisskap
      301 vlqvvlphls t
//
LOCUS       XP_016714686             290 aa            linear   PLN 06-AUG-2024
DEFINITION  NADH kinase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714686
VERSION     XP_016714686.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="NADH kinase isoform X2"
                     /calculated_mol_wt=31535
     Region          19..287
                     /region_name="PLN02929"
                     /note="NADH kinase"
                     /db_xref="CDD:215502"
     CDS             1..290
                     /gene="LOC107928043"
                     /coded_by="XM_016859197.2:138..1010"
                     /db_xref="GeneID:107928043"
ORIGIN      
        1 mstkllnqtr flaspilgck vhkeaikvcq kilqqkpidw kpifrnnlsq pihnvdlvvt
       61 vggdgtllqa shflddsipv lglnsdptqa eevekfsnef datrstgylc aatvknfeqv
      121 ldgfledqiv psklsrisvs vnskvlptca lndiliahpc patvsrfsfk irgddktcsp
      181 lvncrssglr istaagstaa mhsaggfpmp ilsrdlqymv repisqgpai srlmhgliks
      241 dqsmdaswfs kegfvyfdgs hvfhtiqngd tieisskapv lqvvlphlst
//
LOCUS       XP_016714782             885 aa            linear   PLN 06-AUG-2024
DEFINITION  mechanosensitive ion channel protein 6 [Gossypium hirsutum].
ACCESSION   XP_016714782
VERSION     XP_016714782.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714782.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..885
                     /product="mechanosensitive ion channel protein 6"
                     /calculated_mol_wt=100516
     Region          684..855
                     /region_name="MS_channel"
                     /note="Mechanosensitive ion channel; pfam00924"
                     /db_xref="CDD:459999"
     CDS             1..885
                     /gene="LOC107928117"
                     /coded_by="XM_016859293.2:333..2990"
                     /db_xref="GeneID:107928117"
ORIGIN      
        1 mtvetadrke tivkvddgsn kgsiaaasdi vsggggkfwr essydflqds gkissdwkke
       61 ivdmnssssg sssnrsegfd fmqskqgame dppskligqf lhkqkasgei sldmdlemde
      121 lqqqppdhgg slptvaesps psattfprvs fennplrrrq skgsqlkees dgvvkcssns
      181 sftrseggsf krksnllvtk tksrlidppt pekgeprsar agtgksgrrs gflgktmeee
      241 eddpwleedl pdeykkdkls iwvllewlsl iviiaclics ltihylrekr lwdlmlwkwe
      301 vlvlvlicgr lvsgwiiriv vffiernfll rkrvlyfvyg vrkavqnclw lglvliawhy
      361 lldkkvqret kskflkyvtr vlvclvvgvm lwlvktllvk vlassfhvst yfdriqeslf
      421 nqyvieslsg ppfieiqrae eeeerlakev mnlqnagakv ppglkpstts splsartigs
      481 grilksprgk sprlsrvlss ekgekddmgi tidrlhklnh knvsawnmkr lmnivrhgal
      541 stldeqiqds thddeagtni snereakvaa rkifqnvakp gskfiyledi grflqedeal
      601 ktmslfedal esrriskksl knwvvnafre rralaftlnd tktavnrlhh ivdiivgiii
      661 vviwllilei atskvlvfis sqllvvafvf gntcktvfea iiflfvmhpf dvgdrceidg
      721 iqmvveemni lttiflrydn qkimipnsvl atkaihnyyr spdmgdavef cihvktpadk
      781 iglmkqrils yiehksdhwc ptpmvifkel eelnrvriai wlqhkmnhqd mgerwarral
      841 lveemvkifn dldikyrlyp idinvcsmpt vtsdhlppnw tvpns
//
LOCUS       XP_016714783             296 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 22 [Gossypium hirsutum].
ACCESSION   XP_016714783
VERSION     XP_016714783.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714783.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..296
                     /product="B-box zinc finger protein 22"
                     /calculated_mol_wt=32038
     Region          5..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          56..99
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..296
                     /gene="LOC107928118"
                     /coded_by="XM_016859294.2:356..1246"
                     /db_xref="GeneID:107928118"
ORIGIN      
        1 mriqcnvcea aeakvlccad eaalcwacde kihaanklas khqrvplsss ssqmpkcdic
       61 qeasgfffcl qdrallcrkc dvaihtanpy vsshqrfllt gvkvglettd pgasssdvks
      121 pssektsetk tnstsrraap maftggynev lpsnlgdvnn eltkvtyagg stagsiqswq
      181 mddifgltdf nqsygymddg sskadsgkrg dsdsssilrs addevddder lgqvpdsswa
      241 vpqlpsppta sglywpndsr dqcdsvvfvp diccsvmknp fnswrsgsnr krrrhi
//
LOCUS       XP_016714727             228 aa            linear   PLN 06-AUG-2024
DEFINITION  ribonuclease P protein subunit p25-like protein [Gossypium
            hirsutum].
ACCESSION   XP_016714727
VERSION     XP_016714727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="ribonuclease P protein subunit p25-like protein"
                     /calculated_mol_wt=25099
     Region          19..83
                     /region_name="Alba"
                     /note="pfam01918"
                     /db_xref="CDD:426509"
     CDS             1..228
                     /gene="LOC107928088"
                     /coded_by="XM_016859238.2:154..840"
                     /db_xref="GeneID:107928088"
ORIGIN      
        1 mdryqrvekp kaetpideke irissqgsmr nyishaltll qekgsnqivf kamgkainka
       61 vaivelikkr ivglhqitsi gstditdmwe pleeglvple ttrhvsiiii tlskielnms
      121 sagyqpplpa nqvkagshnd rdgrrmprsr gnaeyedggr nhnrgydrgr grgsrgrgrg
      181 rggyngqqad rmedggynye appqggrgkg yrgrgrgfts nrpiqaaa
//
LOCUS       XP_040942769             221 aa            linear   PLN 06-AUG-2024
DEFINITION  rust resistance kinase Lr10-like [Gossypium hirsutum].
ACCESSION   XP_040942769
VERSION     XP_040942769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086835.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="rust resistance kinase Lr10-like"
                     /calculated_mol_wt=25102
     Region          <1..195
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..221
                     /gene="LOC107928066"
                     /coded_by="XM_041086835.1:685..1350"
                     /db_xref="GeneID:107928066"
ORIGIN      
        1 mtngsldkfi fstnsslswq kmfeivvgvg rgieylhngc amkilhfdik phnilldgnf
       61 npklsdfgla klhsvddsii sltaargtlg ymapelfykn lggisykadv ysfgmmlmei
      121 vgrrknlnaf adnssqiyfp swiyhqfelg enielesmte nvnkivrkmi ivafwciqtk
      181 pihrptmtkv lkmleseeel feippksflf svdmssndnd y
//
LOCUS       XP_016714692             642 aa            linear   PLN 06-AUG-2024
DEFINITION  rust resistance kinase Lr10 [Gossypium hirsutum].
ACCESSION   XP_016714692
VERSION     XP_016714692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..642
                     /product="rust resistance kinase Lr10"
                     /calculated_mol_wt=71536
     Region          35..99
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          355..619
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(355..358,361,363,375,377,405,421..424,472,476..477,
                     479,489..490)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..642
                     /gene="LOC107928048"
                     /coded_by="XM_016859203.2:32..1960"
                     /db_xref="GeneID:107928048"
ORIGIN      
        1 mlrqklasff llllallthf glhvatgrgi gdkhcgstfc gnlnisfpfg lrtqahscgp
       61 nfngvelvce nnrtifpmkk gnflvkhisy vnqtillvda slgddncsvp hssspwlnps
      121 lgvlglnrad mndrgeiyvv ncktkminss anyidasrcs tspsdaangy fyflrtvaap
      181 sdfhpsctfe alvpitpsdi tgvstfdiyq rllkgtqfkw yfpndakvgd dgwqqwnsvs
      241 hvvgslflgl mygislyirs ntalilrgts iegyfvdaps rgvqilcvti tgiilartll
      301 gisclavlii rklrrrhlsv ddlienflqs qtnfmpirys yaelkritgg fkdklgqggy
      361 gtvfkgklrs gnlvaikllk eskgngqdfi nevatigrih hvnvvqligf cvegkkqalv
      421 ydfmtngsld kfifstgnss lswqkmfeiv vgvgrgieyl hngcamkilh fdikphnill
      481 ddnfnpkvsd fglaklypvd dsiisltaar gtfgymapel fyknignisy kadiysfgmm
      541 lmeivgrrkn lkdsvdhssq nyfptwiydq felgenmkle dlsenetkiv rkmiivafwc
      601 iqtkpiyrps mtkvlnmles edelleippk slvfsidlss sn
//
LOCUS       XP_040942770             516 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942770
VERSION     XP_040942770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086836.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..516
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.2 isoform X1"
                     /calculated_mol_wt=58014
     Region          37..94
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          337..>377
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <378..491
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..516
                     /gene="LOC107928030"
                     /coded_by="XM_041086836.1:490..2040"
                     /db_xref="GeneID:107928030"
ORIGIN      
        1 matpklpllc llalalfsfp hastarsint pcgftlcgnl sirypfrltt epqscglkrf
       61 ellcdnnrai fpmdrgnfyv qhifndnqti hivdvnvdkd dcsiplsslp fgsptsrkfp
      121 qigatsytyl dtefefdtft yeemfvmncs tkmnkswsga nyinacrcss cpptnknyfy
      181 fldggtaasa fhpsctveal vpislqning lstfdiyrrl rmgtqitwsl qskprwgsav
      241 nvlqslfwvl vgllllyaes mmalvhvlps atsppskeiq iflvtitgii lvrtllgisc
      301 ltvliirklr rrhlsvddai enflqsqknf mpirysyaei kkitggfknk lgqggfgtmf
      361 kgklqsgklv avkllkeska argtfgymap elfyksiggi sykadvysfg mmlmeivgkr
      421 knlnasaehs sqvyfptwiy drlqlgenie ledmtesens imrkmimvaf wciqtkpihr
      481 psmtkvlkml esedelleip pkslifsvdm scnnse
//
LOCUS       XP_016714672             515 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714672
VERSION     XP_016714672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859183.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..515
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.2 isoform X2"
                     /calculated_mol_wt=57943
     Region          37..94
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          337..>377
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <378..490
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..515
                     /gene="LOC107928030"
                     /coded_by="XM_016859183.2:490..2037"
                     /db_xref="GeneID:107928030"
ORIGIN      
        1 matpklpllc llalalfsfp hastarsint pcgftlcgnl sirypfrltt epqscglkrf
       61 ellcdnnrai fpmdrgnfyv qhifndnqti hivdvnvdkd dcsiplsslp fgsptsrkfp
      121 qigatsytyl dtefefdtft yeemfvmncs tkmnkswsga nyinacrcss cpptnknyfy
      181 fldggtaasa fhpsctveal vpislqning lstfdiyrrl rmgtqitwsl qskprwgsav
      241 nvlqslfwvl vgllllyaes mmalvhvlps atsppskeiq iflvtitgii lvrtllgisc
      301 ltvliirklr rrhlsvddai enflqsqknf mpirysyaei kkitggfknk lgqggfgtmf
      361 kgklqsgklv avkllkeska rgtfgymape lfyksiggis ykadvysfgm mlmeivgkrk
      421 nlnasaehss qvyfptwiyd rlqlgeniel edmtesensi mrkmimvafw ciqtkpihrp
      481 smtkvlkmle sedelleipp kslifsvdms cnnse
//
LOCUS       XP_040942771             506 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942771
VERSION     XP_040942771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086837.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..506
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.2 isoform X3"
                     /calculated_mol_wt=56855
     Region          37..94
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          327..>367
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <368..481
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..506
                     /gene="LOC107928030"
                     /coded_by="XM_041086837.1:493..2013"
                     /db_xref="GeneID:107928030"
ORIGIN      
        1 matpklpllc llalalfsfp hastarsint pcgftlcgnl sirypfrltt epqscglkrf
       61 ellcdnnrai fpmdrgnfyv qhifndnqti hivdvnvdkd dcsiplsslp fgsptsrkfp
      121 qigatsytyl dtefefdtft yeemfvmncs tkmnkswsga nyinacrcss cpptnknyfy
      181 fldggtaasa fhpsctveal vpislqning lstfdiyrrl rmgtqitwsl qskprwgsav
      241 nvlqslfwvl vgllllyaes mmalvhvlps atsppskgii lvrtllgisc ltvliirklr
      301 rrhlsvddai enflqsqknf mpirysyaei kkitggfknk lgqggfgtmf kgklqsgklv
      361 avkllkeska argtfgymap elfyksiggi sykadvysfg mmlmeivgkr knlnasaehs
      421 sqvyfptwiy drlqlgenie ledmtesens imrkmimvaf wciqtkpihr psmtkvlkml
      481 esedelleip pkslifsvdm scnnse
//
LOCUS       XP_016714674             450 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016714674
VERSION     XP_016714674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.2 isoform X4"
                     /calculated_mol_wt=50156
     Region          37..94
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          351..>449
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..450
                     /gene="LOC107928030"
                     /coded_by="XM_016859185.2:487..1839"
                     /db_xref="GeneID:107928030"
ORIGIN      
        1 matpklpllc llalalfsfp hastarsint pcgftlcgnl sirypfrltt epqscglkrf
       61 ellcdnnrai fpmdrgnfyv qhifndnqti hivdvnvdkd dcsiplsslp fgsptsrkfp
      121 qigatsytyl dtefefdtft yeemfvmncs tkmnkswsga nyinacrcss cpptnknyfy
      181 fldggtaasa fhpsctveal vpislqning lstfdiyrrl rmgtqitwsl qskprwgsav
      241 nvlqslfwvl vgllllyaes mmalvhvlps atsppskeiq iflvtitgii lvrtllgisc
      301 ltvliirklr rrhlsvddai enflqsqknf mpirysyaei kkitggfknk lgqggfgtmf
      361 kgklqsgklv avkllkeskg ngqdfineva tigrihhvnv vqligfcver kkqalvydfm
      421 ingsldkfif ssgssslswe kmfeivvgvg
//
LOCUS       XP_016714675             450 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016714675
VERSION     XP_016714675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859186.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.2 isoform X4"
                     /calculated_mol_wt=50156
     Region          37..94
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          351..>449
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..450
                     /gene="LOC107928030"
                     /coded_by="XM_016859186.2:487..1839"
                     /db_xref="GeneID:107928030"
ORIGIN      
        1 matpklpllc llalalfsfp hastarsint pcgftlcgnl sirypfrltt epqscglkrf
       61 ellcdnnrai fpmdrgnfyv qhifndnqti hivdvnvdkd dcsiplsslp fgsptsrkfp
      121 qigatsytyl dtefefdtft yeemfvmncs tkmnkswsga nyinacrcss cpptnknyfy
      181 fldggtaasa fhpsctveal vpislqning lstfdiyrrl rmgtqitwsl qskprwgsav
      241 nvlqslfwvl vgllllyaes mmalvhvlps atsppskeiq iflvtitgii lvrtllgisc
      301 ltvliirklr rrhlsvddai enflqsqknf mpirysyaei kkitggfknk lgqggfgtmf
      361 kgklqsgklv avkllkeskg ngqdfineva tigrihhvnv vqligfcver kkqalvydfm
      421 ingsldkfif ssgssslswe kmfeivvgvg
//
LOCUS       XP_016714784             371 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 42 [Gossypium hirsutum].
ACCESSION   XP_016714784
VERSION     XP_016714784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="protein trichome birefringence-like 42"
                     /calculated_mol_wt=41739
     Region          47..369
                     /region_name="PLN02629"
                     /note="powdery mildew resistance 5"
                     /db_xref="CDD:215338"
     CDS             1..371
                     /gene="LOC107928119"
                     /coded_by="XM_016859295.2:177..1292"
                     /db_xref="GeneID:107928119"
ORIGIN      
        1 maallgflgy chclaavlls laivlvhgdi hssfnmgyev krnevkscdf fqgswvfdds
       61 fnplydsssc pfigggfdcq kngrpdrnyl kyrwqpndca lprfngidfl ekytnkkilf
      121 vgdslsnnmw rslicmlhsa ipnpnytfas rgllstfslp dygvsvnwlk ngflvdmaye
      181 kigkvlklds istgqlwlga dvlifnsyhw wthsgrfqsw dyfqygnktv kemdhmeayk
      241 iamttwanwv dtnidpsktr vlfqgvaavh fnakewgeps dkgcikqtep lkgstypgpp
      301 vpgeailktv lskmtkpayl lditlltqlr kdghpsiyar agpklidcsh wclagvpdtw
      361 nqllyaalvq s
//
LOCUS       XP_016714785             244 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L13, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016714785
VERSION     XP_016714785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859296.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..244
                     /product="50S ribosomal protein L13, chloroplastic"
                     /calculated_mol_wt=27376
     Region          105..236
                     /region_name="RplM"
                     /note="Ribosomal protein L13 [Translation, ribosomal
                     structure and biogenesis]; COG0102"
                     /db_xref="CDD:439872"
     CDS             1..244
                     /gene="LOC107928120"
                     /coded_by="XM_016859296.2:209..943"
                     /db_xref="GeneID:107928120"
ORIGIN      
        1 mailcastst ifsssertsf gslkktipsn qssflgffpv aalskpgsvl pttlsfskrd
       61 frvccqdlsl vpenqrwmfe eseadgpdiw nntwypkakd hintektwyv vdatdkilgr
      121 lastiavhir gknlatytps vdmgafvivv naekvavsgk krtqklyrrh sgrpggmkve
      181 tfnqlqqrip eriiehavrg mlpkgrlgra lfnhlkvykg pdhphdaqkp ielpirdkrv
      241 qkqr
//
LOCUS       XP_016714669            1014 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like serine/threonine-protein
            kinase At3g14840 [Gossypium hirsutum].
ACCESSION   XP_016714669
VERSION     XP_016714669.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859180.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714669.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1014
                     /product="probable leucine-rich repeat receptor-like
                     serine/threonine-protein kinase At3g14840"
                     /calculated_mol_wt=111658
     Region          91..937
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          110..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          671..938
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(671..675,679,691,693,722,738..741,745,747,791,793,
                     795..796,798,809,812,829..832)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(671..675,679,691,693,722,738..741,745,791,793,
                     795..796,798,809)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(675,745,747,791,793,795,812,829..832)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(808..815,825..832)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1014
                     /gene="LOC107928026"
                     /coded_by="XM_016859180.2:225..3269"
                     /db_xref="GeneID:107928026"
ORIGIN      
        1 mlafrlllas illasclpcy efattlqdne vqylrdiakt lgkkdwnfnv dpcsgeegwa
       61 tpnaakgfen avtcnctvsn dtvchvvsiv lkaqnlqgsl pkdlvkfpfl qeidltrnfl
      121 ngtippewgs mqlvnisllg nrltgpipke lgnistlssi svefnqlsga lppqlgnlpa
      181 iqrmlissnn ftgeipetfa klttlkdfri sdnqftgkip sfiqnwtnle klamqasglm
      241 gpiplgigdl ekltdlrisd lngtdatfpp lstmkklkil ilrscnligk lpdylgnmtk
      301 lktldlsfnk lsgeipdsfs nirdvdylyl trnlltglip swilekgenv dlsynnfkag
      361 sqgtticqqr svnlfassss sntsgtvscl rsfvcpkswy slhincggre vdvagnatye
      421 ddtdgagasr fyqsrtnwaf sttghflddd rptdsyiwtn ssklsmndsr lymnarlspi
      481 sltyygfcmi sgnytvnlhf aeimfsndnt ynslgrrifd iylqgklvqk dfniedeagg
      541 vgkavikrfp vtvtnstlei rlhwagkgtt gipvrgvygp lisaisvnpn fippaedggs
      601 sggismgavv givagsvfai flivlllwwk gclrqksqle rdlkgldlqt ssfslrqika
      661 atnnfdvank igeggfgpvy kgtladgtvi avkqlsaksk qgnrefvnei gmisalqhph
      721 lvklfgccie gnqllliyey mennslaral fgplecqlkl dwptrrkici giarglaylh
      781 eesrlkivhr dikatnvlld khlnpkisdf glakldeedn thistrvagt ygymapeyam
      841 rgyltdkadv ysfgivilei vsgrsntncr pkeesfylld wvhvlkeegn llglvdprlg
      901 snydkeevmt minvaflctd vnaaarpams svvsmlegka svqefetdss rfgdrsssra
      961 mmkklyqhle ensapesqth smstvgpwts sssaadlypi titseylqnr dsan
//
LOCUS       XP_016714681            1007 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like serine/threonine-protein
            kinase At3g14840 [Gossypium hirsutum].
ACCESSION   XP_016714681
VERSION     XP_016714681.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714681.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1007
                     /product="probable leucine-rich repeat receptor-like
                     serine/threonine-protein kinase At3g14840"
                     /calculated_mol_wt=110343
     Region          28..934
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          667..935
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(667..671,675,687,689,718,734..737,741,743,787,789,
                     791..792,794,805,808,825..828)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(667..671,675,687,689,718,734..737,741,787,789,
                     791..792,794,805)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(671,741,743,787,789,791,808,825..828)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(804..811,821..828)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1007
                     /gene="LOC107928036"
                     /coded_by="XM_016859192.2:65..3088"
                     /db_xref="GeneID:107928036"
ORIGIN      
        1 mmflppllvf asifsaccla tstlgaalak devealksig ktlgktnwnf sidpcssrde
       61 swakfakkga yyvnnvtcdc sstlchivri alkgqnlrgt lpphltrlpy lqdidlsrny
      121 lsgsippqwg smqqlvqisl lgnrltgsip eelanmsnlt slvlehnsfs gnlpatlgnl
      181 pkieklllns nnfigelpet farlttlktf rigdnnftgk ipsfifqnwk kledirivas
      241 glsgpipdig ssgnlkyimi tdlngvestf prlsnlskle ylilsscnli gklptslqnm
      301 pnletldlsf nklsgeiris lpevkqlflt gnmftgaipq wilntnkkid lsynnftstg
      361 gvddcqksgl nlfastsrin nsgvvsclgn lncpvepshy lyincggkee tinnityqad
      421 sdpagpsrfy rstthwafss tgiflddgte kdvlileknq lsssigqlyi narlspsslt
      481 yyafclhngt ynvslhfaei eftdgknyss lgrrifdvyi qgkrelkdfn ikdeaggagk
      541 pilknftanv sdgtleihlq wtgkgttvip vrgvygplis avsvfdpvyk prsesgggis
      601 avakvgivaa aafatfllvv gilwwsgclr rrstlerdlk gielqtgsft lrqikdatnn
      661 fdaankigeg gfgpvykgil adgkeiavkq lsarskqgnr efvteigmis avqhphlvkl
      721 ygcciegsql mliyeylenn slaralfgpe esqltldwpt rrkicigiar glaylheesr
      781 lkivhrdika tnvlldkdln pkisdfglak ldeednthis triagtygym apeyamhghl
      841 tdkadvysfg ivsleivsgm cntkqgrgke esfylldlai tlkqevklld lidprvayhc
      901 naeeamvmid vallctnptt aarpsmsmvv smlegkalva diltessiya skfdakrlyg
      961 raegndaenn sqtksilgdg qwtlssdlyp assissymqn thststk
//
LOCUS       XP_016714703            1004 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like serine/threonine-protein
            kinase At3g14840 [Gossypium hirsutum].
ACCESSION   XP_016714703
VERSION     XP_016714703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1004
                     /product="probable leucine-rich repeat receptor-like
                     serine/threonine-protein kinase At3g14840"
                     /calculated_mol_wt=109761
     Region          74..931
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          230..255
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          256..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..932
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(664..668,672,684,686,715,731..734,738,740,784,786,
                     788..789,791,802,805,822..825)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(664..668,672,684,686,715,731..734,738,784,786,
                     788..789,791,802)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(668,738,740,784,786,788,805,822..825)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(801..808,818..825)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1004
                     /gene="LOC107928061"
                     /coded_by="XM_016859214.2:90..3104"
                     /db_xref="GeneID:107928061"
ORIGIN      
        1 mlfppllvfa sifsacclat stlgatlakd evealesigr tlgktwkfsv dpcgsgdesw
       61 akfaekdayy vnnvtcdcss spchivrivl kgqnlsgtlp pqltrlpylq eidlsrnyls
      121 gsippqwgsm qqlvkisllg nrltgsipee lanmsnltsl vlehnnfsgk lpaalgnlpk
      181 ierlflnsnn figelpetfa rlttlkefri gdnnftgkip gfifqnwtnl tdiymiasgl
      241 sgpipdivss gnlkniiisd lngaesqisq lsnlsnleil ilrscnlige lptslnhmss
      301 lktldfsfng lsgeinislp rakhlilagn mftgavpqwi ldtnqiidls ynnftstggv
      361 ddcqksglnl fastsrinns gavsclgnln cpsepshyly incggkvetv dnityesdvy
      421 ddklstfhrs tywafsgtgi flddsitkgs lvrenkqvas svgplyinar lsyssltyya
      481 fclhnatynv slhfaeidft dgknysslgr rifdvyiqgk relkdfnikd kaggvgkpil
      541 knftanvsdg tleirlqwag kgttsiperg vfgplisais ifdpaykprk gsgggisaaa
      601 evgivaaaif atflivggil wwsgclrrrs tlerdlkgie lqtscftlrq ikdatnnfda
      661 ankigeggfg pvykgiladg teiavkqlsa rskqgnrefv teigmisalq hphlvklygc
      721 ciegnqllli yeylqnnsla ralfgpeefq ltldwptrrk icigiargla ylheesrlki
      781 vhrdikatnv lldkdlnpki sdfglaklde ednthistri agtygymape yamhgrltdk
      841 advysfgiva leivsgtcnt khsrvkeesf ylldlantlk qkgnlldlid prvashcdpe
      901 gailmidval lctnstaaar psmstvvsil egkasfpnii tnssiygsel npknlyenve
      961 ekdvennslt krmlgdgqwt sssdlypvsl tssywqnsss tskn
//
LOCUS       XP_016714691             153 aa            linear   PLN 06-AUG-2024
DEFINITION  arginine--tRNA ligase, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016714691
VERSION     XP_016714691.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859202.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..153
                     /product="arginine--tRNA ligase,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=17313
     Region          <53..153
                     /region_name="PLN02286"
                     /note="arginine-tRNA ligase"
                     /db_xref="CDD:215160"
     CDS             1..153
                     /gene="LOC107928047"
                     /coded_by="XM_016859202.2:487..948"
                     /db_xref="GeneID:107928047"
ORIGIN      
        1 mhiminnlwi strlpscsma aaceaskllm swkwrmvmrs mlcftklvaq aldvincvkk
       61 gtlvlehkde rdlglhllqf aevveeactn lllnvvcdyl ynlseifskf ysnpeckvig
      121 sdketsrlll ceatavvmrk cfnllgitpi yki
//
LOCUS       XP_016714690             153 aa            linear   PLN 06-AUG-2024
DEFINITION  arginine--tRNA ligase, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016714690
VERSION     XP_016714690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..153
                     /product="arginine--tRNA ligase,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=17313
     Region          <53..153
                     /region_name="PLN02286"
                     /note="arginine-tRNA ligase"
                     /db_xref="CDD:215160"
     CDS             1..153
                     /gene="LOC107928047"
                     /coded_by="XM_016859201.2:660..1121"
                     /db_xref="GeneID:107928047"
ORIGIN      
        1 mhiminnlwi strlpscsma aaceaskllm swkwrmvmrs mlcftklvaq aldvincvkk
       61 gtlvlehkde rdlglhllqf aevveeactn lllnvvcdyl ynlseifskf ysnpeckvig
      121 sdketsrlll ceatavvmrk cfnllgitpi yki
//
LOCUS       XP_040942773             494 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like serine/threonine-protein
            kinase At3g14840 [Gossypium hirsutum].
ACCESSION   XP_040942773
VERSION     XP_040942773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086839.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..494
                     /product="probable leucine-rich repeat receptor-like
                     serine/threonine-protein kinase At3g14840"
                     /calculated_mol_wt=54350
     Region          71..250
                     /region_name="Malectin"
                     /note="Malectin domain; pfam11721"
                     /db_xref="CDD:432024"
     Region          335..>494
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(335..338,341,343,355,357,386,402..405,455,459..460,
                     462,472..473)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..494
                     /gene="LOC107928062"
                     /coded_by="XM_041086839.1:11..1495"
                     /db_xref="GeneID:107928062"
ORIGIN      
        1 mftgavpqwi lntnrkidls ynnftstggv ddcqksglnl fastsrinns gvvsclgnln
       61 cpveplhsfy incggkeeti nnityeadpd kvgtstfyrs tthwafsssg iflddhteed
      121 vlvlenkqls ssigqiysna rlspssltyy afclhnatys vslhfteiqf tdgknygslg
      181 rrifdvyiqg klelkdfnik deaggagkpi lknftanvsd gtleirlqwt gkgttvipmr
      241 gvygplisai svfdpvykpq sesrggisav akvaivaaaa fatfllvvgi lwwsgclrrr
      301 stlerylkgi elqtgsftlr qikdatnnfd aankvgeggf gpvykgilad gkeiavkqls
      361 arsnqgnref vteigmisav qhphlvklyg cciegnqlml iyeylennsl aralfgpeef
      421 qltldwptrr kicigiargl aylheesrlk ivhrdikatn vlldknldpk isdfglakld
      481 eednthistr iagt
//
LOCUS       XP_016714770            1015 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g53430 [Gossypium hirsutum].
ACCESSION   XP_016714770
VERSION     XP_016714770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859281.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1015
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g53430"
                     /calculated_mol_wt=111310
     Region          65..936
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          94..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          212..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..259
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          260..307
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          308..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..353
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          670..937
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(670..674,678,690,692,721,737..740,744,746,790,792,
                     794..795,797,808,811,828..831)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(670..674,678,690,692,721,737..740,744,790,792,
                     794..795,797,808)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(674,744,746,790,792,794,811,828..831)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(807..814,824..831)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1015
                     /gene="LOC107928106"
                     /coded_by="XM_016859281.2:421..3468"
                     /db_xref="GeneID:107928106"
ORIGIN      
        1 mgfvfsivkv vsvlflgfla lncstefgsn aqllpesevq tlqtvfskmq hpnastidrt
       61 lctgsswnyt ttdlveshiv cncsdgnnti chvtqilikg hnltgilppe lgnlthlevi
      121 dltrnylngs lpsnlsqlpl tslsllgnrl sgpipreigd iptleglvle dnlfsgslps
      181 nlgnldrlsr lllssnnftg tipesfgklk nltdfridgs slsgkipdfi gnwtkltrld
      241 mqgtsmegpi pstiselknl tdlritdlsg rssavpnlea mkdmeelvlr nclltgsipp
      301 yigdmkslkt ldlsfnrltg qipqelrslt kldylfltnn sltgpvpdwi lesdenidls
      361 ynnftsssqt scqqakvnlv ssssssadsn svpwclrkdl pcprkpnhhs lfincggehi
      421 nvdgndyeed lstigpsnff nsankwayss tgvylgkasa hytakassal tgpafynsar
      481 lapqslkyyg lcllrgnyhv klhfaeimys dnktfeshgr rlfdvsiqgr ivledfnime
      541 eaggvgrgiv refdvdvngs tleihlfwrg kgttaipdrg vygplisait itpnfpvdtg
      601 nglsagaiag ivigscvili llliilrltg ylggkhdens elhglelqtg yfslrqikaa
      661 tnnfdsanki geggfgpvyk gvlpdgrvva vkqlsskskq gnrefvteig misglqhpnl
      721 vklygccieg nqllliyeyl ennslaralf grdeqrlnld wstrkkiclg iarglaylhe
      781 esrlkivhrd ikatnvlldk dlnakisdfg lakldeeent histriagti gymapeyamr
      841 gyltdkadvy sfgvvlleiv sgksntnykp keefvflldw ayvlqeqgnl lelvdpclgs
      901 kyskeealrm lnlallctnp sptlrplmss vvsmiegkap vqaplikrkd adqdarfkaf
      961 emlshdsqtn vstfshdsqa prstvmdgpw tdssmsipde trdhssssml lnnnp
//
LOCUS       XP_016714683            1110 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase EFR isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016714683
VERSION     XP_016714683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1110
                     /product="LRR receptor-like serine/threonine-protein
                     kinase EFR isoform X1"
                     /calculated_mol_wt=122515
     Region          36..1096
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          <70..160
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          123..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          413..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..463
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          464..489
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          490..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..657
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          658..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          682..703
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          706..728
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1110
                     /gene="LOC107928038"
                     /coded_by="XM_016859194.2:76..3408"
                     /db_xref="GeneID:107928038"
ORIGIN      
        1 mgntslnlal liifqfsira tfsmklttil tdqsallalk nhvydpenvl etnwsssthv
       61 cnwfrvscgs khhrvtalnl sglelvgtlp pslgnlsfls llsltnnsfh grlpvqlsnl
      121 rrlkhlsfgn nsfsgeipsw lgsltelrsf fldnnnlkgv ipfslgnlsk leiltlsgnq
      181 llgsipssif nisslqkmdl snnmlsgsip svshdllsie linfninnlt ghlsndmfdh
      241 fpnlkelhls anmlsgripm slfkckklqi fslsynqleg slpveignls mlqrvyiarn
      301 hfegeiprhi vnltllsvld fpdnnftgti phqignlqnl eylhlganni fgsippaifn
      361 istlsiiyle lnqlsgrlpp dvglwlpnle qlhldinqlv gsfpmsisna sqltsldiss
      421 nyfsgtipdt lgnlrnlkrl nlettnlsss gmsflssltn crglevlyfg dnplisgklp
      481 gsignlsssl qkfygpicni rgsipsgfgn lsrlisisls hnkltgmipt tigglkelqk
      541 islhynkldg pipsdlchlk klaflflssn klsgpipacl gglislrsly ldsnmfsstm
      601 pstltrisdl lilnlssnsl sgpvpidigk wkvltsmdls nnqlssdipi gvadlqdmty
      661 fslsnnrirg sipesfgdll slefldlsrn nlsgqipksl eklpylkyfn vsfnrlqgei
      721 pkggsfgnys fesftgneal cgaaqlhvps cktrplrnsk vrtkliifva lpiasaisvv
      781 aliiiilrrr krkdrstaqe dltplgtwrr isyhelhqat ngfsdrrllg ngsygsvyqg
      841 tlldgmevav kvfklelega fksfdvecev lrnirhrnli kiisscsndl dfkalvlefm
      901 pngsldkwly fnnhfldilq rlnimidvas aleylhhgna tpvvhcdlkp snvlldedmv
      961 ahlgdfgiak llckedsmih tmtmatigyi apeygiegiv stkgdvysfg ilmietitrk
     1021 kptdkmfage qnlkiwvkes issplnqvvd tnllctigsk rsaanncals ilhvglecsl
     1081 elpnerpnmk eivrklnkik vkflediegv
//
LOCUS       XP_040942774            1085 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase EFR isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942774
VERSION     XP_040942774.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086840.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1085
                     /product="LRR receptor-like serine/threonine-protein
                     kinase EFR isoform X2"
                     /calculated_mol_wt=119671
     Region          36..1071
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          <70..160
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          123..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          413..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..463
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          464..489
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          490..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..657
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          658..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          682..703
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          706..728
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1085
                     /gene="LOC107928038"
                     /coded_by="XM_041086840.1:76..3333"
                     /db_xref="GeneID:107928038"
ORIGIN      
        1 mgntslnlal liifqfsira tfsmklttil tdqsallalk nhvydpenvl etnwsssthv
       61 cnwfrvscgs khhrvtalnl sglelvgtlp pslgnlsfls llsltnnsfh grlpvqlsnl
      121 rrlkhlsfgn nsfsgeipsw lgsltelrsf fldnnnlkgv ipfslgnlsk leiltlsgnq
      181 llgsipssif nisslqkmdl snnmlsgsip svshdllsie linfninnlt ghlsndmfdh
      241 fpnlkelhls anmlsgripm slfkckklqi fslsynqleg slpveignls mlqrvyiarn
      301 hfegeiprhi vnltllsvld fpdnnftgti phqignlqnl eylhlganni fgsippaifn
      361 istlsiiyle lnqlsgrlpp dvglwlpnle qlhldinqlv gsfpmsisna sqltsldiss
      421 nyfsgtipdt lgnlrnlkrl nlettnlsss gmsflssltn crglevlyfg dnplisgklp
      481 gsignlsssl qkfygpicni rgsipsgfgn lsrlisisls hnkltgmipt tigglkelqk
      541 islhynkldg pipsdlchlk klaflflssn klsgpipacl gglislrsly ldsnmfsstm
      601 pstltrisdl lilnlssnsl sgpvpidigk wkvltsmdls nnqlssdipi gvadlqdmty
      661 fslsnnrirg sipesfgdll slefldlsrn nlsgqipksl eklpylkyfn vsfnrlqgei
      721 pkggsfgnys fesftgneal cgaaqlhvps cktrplrnsk vrtkliifva lpiasaisvv
      781 aliiiilrrr krkdrstaqe dltplgtwrr isyhelhqat ngfsdrrllg ngsygsvyqg
      841 tlldgmevav kvfklelega fksfdvecev lrnirhrnli kiisscsndl dfkalvlefm
      901 pngsldkwly fnnhfldilq rlnimidvas aleylhhgna tpvvhcdlkp snvlldedmv
      961 ahlgdfgiak llckedsmih tmtmatigyi apeygiegiv stkgeqnlki wvkesisspl
     1021 nqvvdtnllc tigskrsaan ncalsilhvg lecslelpne rpnmkeivrk lnkikvkfle
     1081 diegv
//
LOCUS       XP_016714702            1112 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase EFR [Gossypium
            hirsutum].
ACCESSION   XP_016714702
VERSION     XP_016714702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1112
                     /product="LRR receptor-like serine/threonine-protein
                     kinase EFR"
                     /calculated_mol_wt=122886
     Region          11..1087
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          <72..147
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          125..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          149..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          294..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          342..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          390..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          414..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..490
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          491..514
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          515..538
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          539..562
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          563..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..610
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..634
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          635..658
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          659..682
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          683..704
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1112
                     /gene="LOC107928060"
                     /coded_by="XM_016859213.2:31..3369"
                     /db_xref="GeneID:107928060"
ORIGIN      
        1 mgktflnlal liifhfffim atssmkltti vtdqlallal kehvihdpen vlttnwsast
       61 hvckwfgvsc gskhrrvval nitglglvgt lpphlgnlsf lsllsisdns fdgelpvqls
      121 nlrrlkhinf rnnnlsgeip swlgslpelq rlflyhnhfk gvipfslgnl sklemldlfq
      181 nqlsgsipss ifnisslqki nlrnnylfgs ipsvshdils lelidftfnn ltghfpsdmf
      241 dhlpnlkkls lsdnmlsgki paslckckel eilslsynql ggslpveign lsmlrilfig
      301 rnhfegeipq qignltllmv ldtadnnltg iiphqignlk hlellnlgfn nfvgsippai
      361 fnstlssisl elnhlsghlp ldmglwlpnl enlylgvnql hgsfsksicn asqltqldvs
      421 qnyfsgsipd nlgnlrnlkv ldlqdnnlts lglsflsslt ncrgleylif genqllsgql
      481 pglvgnlsrs lrrfdasfcn isgsipseig nlsslisivl fdskltgtip ttvgglkelq
      541 slslennkle gsipfelchl nklaflfltn nklsgpipac lgnlislrnl flgsnmfsss
      601 ipsswtglnd llilnlsyns lsgplpidmg kwkvltsmdl snnqfssnip tgvanlkdlt
      661 hfslsnnrit gsipesfgdl lslefldlsr nnlsgeipks lenlrflkyf nvsfnrlqge
      721 ipkggpfgny siesfkgnea lcgaaqlhvp csktrplrns kvrtkliisv alpiasailv
      781 laliiiilrr rkrkdrsttq edstplgtwr risyhelhqa tdgfsdrrll gngsygsvyq
      841 gtlldgmefa vkvfkleleg afksfdvece vlrnirhrnl ikiisscsnd ldfkalvlef
      901 msngsldkwl ysnnhsldil qrlnimidva saleylhhgn atpvvhcdlk psnvlldedm
      961 vahlsdfgia kllseedsmi qtmtmakigy mapeygiegi vstkgdvysf gilmmetitr
     1021 kkptnemfeg etslrswvee slssslnqvl dtnlqssigr krsatdncal sillvglecs
     1081 veapderldm ketvtklkki kvrllkdigr vr
//
LOCUS       XP_016710804             460 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GRAVITROPIC IN THE LIGHT 1 [Gossypium hirsutum].
ACCESSION   XP_016710804
VERSION     XP_016710804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016855315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..460
                     /product="protein GRAVITROPIC IN THE LIGHT 1"
                     /calculated_mol_wt=52396
     Region          73..198
                     /region_name="DUF641"
                     /note="Plant protein of unknown function (DUF641);
                     pfam04859"
                     /db_xref="CDD:461458"
     CDS             1..460
                     /gene="LOC107924735"
                     /coded_by="XM_016855315.2:237..1619"
                     /db_xref="GeneID:107924735"
ORIGIN      
        1 meavrpsavt pskskwartl skvlhrhata agvvpdddgv hkvkpkgtee wndsqttkrl
       61 sqkfdrlhee eletkvalea liakifatvs aikagyaqlq haqspydaeg iqgadqlivs
      121 dlkklselkq cflkkqydfs peqgmalaei qelkslsttf kimgkklesq trlkeseiif
      181 lkekldesnk qnrllekrln qsgqlfvldn lhlstlnpth vitvlrqtvk sirgfvrlmi
      241 demkladwdi naaassiqsg vmywkeddkc fafesficre mfkafhlpyf slfgssvpqg
      301 kkhaqvffdr fmelksmkvk eyleikpkst fakfcrnkyl qvvhpkmess ffgnlntrdm
      361 vssyqfpdtt fftlfaemak kvwllhclaf afqpqasifq itkgcrfsev ymesvadeaf
      421 lsadigpese prvaftvvpg frvgktviqc qvylsqfksr
//
LOCUS       XP_016708955             415 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708955
VERSION     XP_016708955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016853466.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..415
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog isoform X1"
                     /calculated_mol_wt=47471
     Region          51..371
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..415
                     /gene="LOC107923251"
                     /coded_by="XM_016853466.2:323..1570"
                     /db_xref="GeneID:107923251"
ORIGIN      
        1 manqlirldh khisvvqlqm gedriletyi nnlsegapna iyghlqdagf lyvarmlggt
       61 kldptlisal verwrqetht fhfpcgecti tledvslqlg lpvdgevvtg pvlsadwsst
      121 ceqllgkvpn kfkgsriemk wlednfktie asasdvekeq farafilkli ggllmpdksr
      181 nlvhlrwlll lanlkeagrl swgsavlatl yremcratqp ekakiggcml llqswawyrl
      241 pflrprvdlp yefplviwwn nparhsgtst eledirlald qqteeefvwm pyanpriqec
      301 ipvkflanrn iwhvkvpliv fatvemhesn rvmrqsgcmq ripsspqkld dlhnidlqgr
      361 leedwssftk iisrfgsvgt ityqrvnhfs hqswlhlqit wigsgirash iycrl
//
LOCUS       XP_040942775             389 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942775
VERSION     XP_040942775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086841.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog isoform X2"
                     /calculated_mol_wt=44379
     Region          51..371
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..389
                     /gene="LOC107923251"
                     /coded_by="XM_041086841.1:324..1493"
                     /db_xref="GeneID:107923251"
ORIGIN      
        1 manqlirldh khisvvqlqm gedriletyi nnlsegapna iyghlqdagf lyvarmlggt
       61 kldptlisal verwrqetht fhfpcgecti tledvslqlg lpvdgevvtg pvlsadwsst
      121 ceqllgkvpn kfkgsriemk wlednfktie asasdvekeq farafilkli ggllmpdksr
      181 nlvhlrwlll lanlkeagrl swgsavlatl yremcratqp ekakiggcml llqswawyrl
      241 pflrprvdlp yefplviwwn nparhsgtst eledirlald qqteeefvwm pyanpriqec
      301 ipvkflanrn iwhvkvpliv fatvemhesn rvmrqsgcmq ripsspqkld dlhnidlqgr
      361 leedwssftk iisrfgsvgi rashiycrl
//
LOCUS       XP_040942776             389 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942776
VERSION     XP_040942776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086842.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog isoform X2"
                     /calculated_mol_wt=44379
     Region          51..371
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..389
                     /gene="LOC107923251"
                     /coded_by="XM_041086842.1:267..1436"
                     /db_xref="GeneID:107923251"
ORIGIN      
        1 manqlirldh khisvvqlqm gedriletyi nnlsegapna iyghlqdagf lyvarmlggt
       61 kldptlisal verwrqetht fhfpcgecti tledvslqlg lpvdgevvtg pvlsadwsst
      121 ceqllgkvpn kfkgsriemk wlednfktie asasdvekeq farafilkli ggllmpdksr
      181 nlvhlrwlll lanlkeagrl swgsavlatl yremcratqp ekakiggcml llqswawyrl
      241 pflrprvdlp yefplviwwn nparhsgtst eledirlald qqteeefvwm pyanpriqec
      301 ipvkflanrn iwhvkvpliv fatvemhesn rvmrqsgcmq ripsspqkld dlhnidlqgr
      361 leedwssftk iisrfgsvgi rashiycrl
//
LOCUS       XP_016709878             476 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein Sec61 subunit alpha [Gossypium hirsutum].
ACCESSION   XP_016709878
VERSION     XP_016709878.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016854389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016709878.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="protein transport protein Sec61 subunit alpha"
                     /calculated_mol_wt=52113
     Region          1..474
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..476
                     /gene="LOC107924102"
                     /coded_by="XM_016854389.2:160..1590"
                     /db_xref="GeneID:107924102"
ORIGIN      
        1 mgggfrvlhl vrpflsflpe vqsadkkvpf rekviytvis lfiflvcsql plygihsttg
       61 adpfywmrvi lasnrgtvme lgitpivtsg lviqllagsk iievdnnvre drallngaqk
      121 llgiliaige avayvlsgmy gsvgqlgvgn ailiilqlcf agiiviclde llqkgyglgs
      181 gislfiatni ceniiwkafs pttinsgrga efegaviafv hnlltrenki ralreafyrq
      241 nlpnvtnlla tvlifliviy fqgfrvvlpv rsknargqqg sypiklfyts nmpiilhsal
      301 vsnlyfisql lyrrysgnff vnllgkwkes eysngqtipv gglayyitap sslaemaanp
      361 fhalfylvfm lsacalfskt wievsgssar dvakqlreqq mvmpghregs lqkelnryip
      421 taaafggmci galtvladlm gaigsgtgil lavtiiyqyf etfekekase lgffgl
//
LOCUS       XP_016709880             476 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein Sec61 subunit alpha [Gossypium hirsutum].
ACCESSION   XP_016709880
VERSION     XP_016709880.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016854391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016709880.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="protein transport protein Sec61 subunit alpha"
                     /calculated_mol_wt=52113
     Region          1..474
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..476
                     /gene="LOC107924102"
                     /coded_by="XM_016854391.2:131..1561"
                     /db_xref="GeneID:107924102"
ORIGIN      
        1 mgggfrvlhl vrpflsflpe vqsadkkvpf rekviytvis lfiflvcsql plygihsttg
       61 adpfywmrvi lasnrgtvme lgitpivtsg lviqllagsk iievdnnvre drallngaqk
      121 llgiliaige avayvlsgmy gsvgqlgvgn ailiilqlcf agiiviclde llqkgyglgs
      181 gislfiatni ceniiwkafs pttinsgrga efegaviafv hnlltrenki ralreafyrq
      241 nlpnvtnlla tvlifliviy fqgfrvvlpv rsknargqqg sypiklfyts nmpiilhsal
      301 vsnlyfisql lyrrysgnff vnllgkwkes eysngqtipv gglayyitap sslaemaanp
      361 fhalfylvfm lsacalfskt wievsgssar dvakqlreqq mvmpghregs lqkelnryip
      421 taaafggmci galtvladlm gaigsgtgil lavtiiyqyf etfekekase lgffgl
//
LOCUS       XP_016709877             476 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein Sec61 subunit alpha [Gossypium hirsutum].
ACCESSION   XP_016709877
VERSION     XP_016709877.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016854388.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016709877.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="protein transport protein Sec61 subunit alpha"
                     /calculated_mol_wt=52113
     Region          1..474
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..476
                     /gene="LOC107924102"
                     /coded_by="XM_016854388.2:467..1897"
                     /db_xref="GeneID:107924102"
ORIGIN      
        1 mgggfrvlhl vrpflsflpe vqsadkkvpf rekviytvis lfiflvcsql plygihsttg
       61 adpfywmrvi lasnrgtvme lgitpivtsg lviqllagsk iievdnnvre drallngaqk
      121 llgiliaige avayvlsgmy gsvgqlgvgn ailiilqlcf agiiviclde llqkgyglgs
      181 gislfiatni ceniiwkafs pttinsgrga efegaviafv hnlltrenki ralreafyrq
      241 nlpnvtnlla tvlifliviy fqgfrvvlpv rsknargqqg sypiklfyts nmpiilhsal
      301 vsnlyfisql lyrrysgnff vnllgkwkes eysngqtipv gglayyitap sslaemaanp
      361 fhalfylvfm lsacalfskt wievsgssar dvakqlreqq mvmpghregs lqkelnryip
      421 taaafggmci galtvladlm gaigsgtgil lavtiiyqyf etfekekase lgffgl
//
LOCUS       XP_040942777             476 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein Sec61 subunit alpha [Gossypium hirsutum].
ACCESSION   XP_040942777
VERSION     XP_040942777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086843.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="protein transport protein Sec61 subunit alpha"
                     /calculated_mol_wt=52113
     Region          1..474
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..476
                     /gene="LOC107924102"
                     /coded_by="XM_041086843.1:35..1465"
                     /db_xref="GeneID:107924102"
ORIGIN      
        1 mgggfrvlhl vrpflsflpe vqsadkkvpf rekviytvis lfiflvcsql plygihsttg
       61 adpfywmrvi lasnrgtvme lgitpivtsg lviqllagsk iievdnnvre drallngaqk
      121 llgiliaige avayvlsgmy gsvgqlgvgn ailiilqlcf agiiviclde llqkgyglgs
      181 gislfiatni ceniiwkafs pttinsgrga efegaviafv hnlltrenki ralreafyrq
      241 nlpnvtnlla tvlifliviy fqgfrvvlpv rsknargqqg sypiklfyts nmpiilhsal
      301 vsnlyfisql lyrrysgnff vnllgkwkes eysngqtipv gglayyitap sslaemaanp
      361 fhalfylvfm lsacalfskt wievsgssar dvakqlreqq mvmpghregs lqkelnryip
      421 taaafggmci galtvladlm gaigsgtgil lavtiiyqyf etfekekase lgffgl
//
LOCUS       XP_016709148             183 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 4 [Gossypium hirsutum].
ACCESSION   XP_016709148
VERSION     XP_016709148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016853659.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..183
                     /product="dirigent protein 4"
                     /calculated_mol_wt=20279
     Region          36..181
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..183
                     /gene="LOC107923463"
                     /coded_by="XM_016853659.2:129..680"
                     /db_xref="GeneID:107923463"
ORIGIN      
        1 mkrltwilil hlfsvsvqsq yyteslpydp eepkvtnlhf flheflsgsn ptvamiaqan
       61 itssdnnssv pfstifaldd ilktgpedns evignaqglg iliadtnttn llwywdfgfi
      121 tgkfngssis mfsrnpttvt vrelsvvggr gkfrmakgfa qlkdysrndt tiiaelnvtv
      181 ihy
//
LOCUS       XP_016722664             535 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722664
VERSION     XP_016722664.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867175.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..535
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58284
     Region          23..534
                     /region_name="CDC27"
                     /note="DNA polymerase subunit Cdc27; pfam09507"
                     /db_xref="CDD:462819"
     CDS             1..535
                     /gene="LOC107934693"
                     /coded_by="XM_016867175.2:84..1691"
                     /db_xref="GeneID:107934693"
ORIGIN      
        1 mtqietlgil eeiqaivsdk iqvvsykwls rnflvssnva krllaefvek hgsglevvys
       61 lsgwlknsps nyhiqlvtrh klseakqeyd gncradvysv qvcipedpaa iwnteflqae
      121 elfkqpapve nclrdnrfcg isasfvkrnv dgtparvaaa qpnsagisgp skpnssqtna
      181 alpsqqnkfl qssskvaqht pimvkdvksd gigevhnlav kpstdkkktt slpsnknkdq
      241 ngksstgngg slatlwgrac tkpkcssvpe vgsdsiqnfn gtadaqicar eavedensdl
      301 dayevnfrra sygegnkkrr vvfdfsdede nedavnlasp dlpkrksllg seqdsktlvs
      361 erpnsivdkp nkdevnikee tmtdgepnrs lreetsllsk rtngrnsvvk lesqlpetap
      421 nkmdevtdaa pnspkrrkvi kthiddhgre vnevvwegee tevkkvenhm pekvgttnae
      481 ansvtnttnr ptapkrspav gstapsnpgg kagnkkagna kdpkqgnils ffkka
//
LOCUS       XP_016722665             114 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722665
VERSION     XP_016722665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867176.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="ubiquitin domain-containing protein 1 isoform
                     X1"
                     /calculated_mol_wt=12480
     Region          16..113
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..114
                     /gene="LOC107934694"
                     /coded_by="XM_016867176.2:208..552"
                     /db_xref="GeneID:107934694"
ORIGIN      
        1 mgcagstpgk gdgnvkkirk pkpwkhpqpi tksqleqmhe efwdtaphyg gskeiwdalk
       61 aatkqdltfa qaivdsagvi vqsadlticy dergakyelp kyvlseptnl ipei
//
LOCUS       XP_016722667             114 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722667
VERSION     XP_016722667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867178.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="ubiquitin domain-containing protein 1 isoform
                     X1"
                     /calculated_mol_wt=12480
     Region          16..113
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..114
                     /gene="LOC107934694"
                     /coded_by="XM_016867178.2:205..549"
                     /db_xref="GeneID:107934694"
ORIGIN      
        1 mgcagstpgk gdgnvkkirk pkpwkhpqpi tksqleqmhe efwdtaphyg gskeiwdalk
       61 aatkqdltfa qaivdsagvi vqsadlticy dergakyelp kyvlseptnl ipei
//
LOCUS       XP_016722668             114 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722668
VERSION     XP_016722668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867179.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="ubiquitin domain-containing protein 1 isoform
                     X1"
                     /calculated_mol_wt=12480
     Region          16..113
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..114
                     /gene="LOC107934694"
                     /coded_by="XM_016867179.2:210..554"
                     /db_xref="GeneID:107934694"
ORIGIN      
        1 mgcagstpgk gdgnvkkirk pkpwkhpqpi tksqleqmhe efwdtaphyg gskeiwdalk
       61 aatkqdltfa qaivdsagvi vqsadlticy dergakyelp kyvlseptnl ipei
//
LOCUS       XP_040942778              96 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942778
VERSION     XP_040942778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086844.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..96
                     /product="ubiquitin domain-containing protein 1 isoform
                     X2"
                     /calculated_mol_wt=10449
     Region          16..95
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..96
                     /gene="LOC107934694"
                     /coded_by="XM_041086844.1:224..514"
                     /db_xref="GeneID:107934694"
ORIGIN      
        1 mgcagstpgk gdgnvkkirk pkpwkhpqpi tksqleqmhe efwdtaphyg gskaivdsag
       61 vivqsadlti cydergakye lpkyvlsept nlipei
//
LOCUS       XP_040942779              96 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942779
VERSION     XP_040942779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086845.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..96
                     /product="ubiquitin domain-containing protein 1 isoform
                     X2"
                     /calculated_mol_wt=10449
     Region          16..95
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..96
                     /gene="LOC107934694"
                     /coded_by="XM_041086845.1:227..517"
                     /db_xref="GeneID:107934694"
ORIGIN      
        1 mgcagstpgk gdgnvkkirk pkpwkhpqpi tksqleqmhe efwdtaphyg gskaivdsag
       61 vivqsadlti cydergakye lpkyvlsept nlipei
//
LOCUS       XP_040942780              96 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942780
VERSION     XP_040942780.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086846.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..96
                     /product="ubiquitin domain-containing protein 1 isoform
                     X2"
                     /calculated_mol_wt=10449
     Region          16..95
                     /region_name="UBD"
                     /note="Ubiquitin-binding domain; pfam16455"
                     /db_xref="CDD:465122"
     CDS             1..96
                     /gene="LOC107934694"
                     /coded_by="XM_041086846.1:227..517"
                     /db_xref="GeneID:107934694"
ORIGIN      
        1 mgcagstpgk gdgnvkkirk pkpwkhpqpi tksqleqmhe efwdtaphyg gskaivdsag
       61 vivqsadlti cydergakye lpkyvlsept nlipei
//
LOCUS       XP_016722661             386 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma-glutamyl hydrolase 2 [Gossypium hirsutum].
ACCESSION   XP_016722661
VERSION     XP_016722661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867172.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="gamma-glutamyl hydrolase 2"
                     /calculated_mol_wt=42789
     Region          95..367
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            194
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
     CDS             1..386
                     /gene="LOC107934690"
                     /coded_by="XM_016867172.2:132..1292"
                     /db_xref="GeneID:107934690"
ORIGIN      
        1 mpslfgsnps ssdpandtvp spssscssss spdmwnyffi pillcltkel slakaqtstg
       61 lllpnqrgdg saddslisfs scanadpkly yrpvigilsh pgdgasgrln ndtnasyiaa
      121 syvkfveaag arvipliyne peeilfqkle lvngvlftgg wskyglyydi akmifkkvie
      181 kndrgdhfpl yavclgfell tmiisedkni lepfsasnqa sslqfvenvn vegtvfqrfp
      241 pnllqklgtd clvmqnhryg ispeklqntp nlsrffkilt tstdknnkvy vstaeahgyp
      301 vtafqwhpek nafewglpmi phtddaievt qhvanflire arrslnrpat qkvldsliyn
      361 ysptycgkag kgfdevyift qrrari
//
LOCUS       XP_016722619            1111 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor kinase-like protein Xa21 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016722619
VERSION     XP_016722619.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722619.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1111
                     /product="receptor kinase-like protein Xa21 isoform X1"
                     /calculated_mol_wt=123421
     Region          10..1097
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          364..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..412
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          413..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..460
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          461..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..657
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          658..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          682..703
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1111
                     /gene="LOC107934650"
                     /coded_by="XM_016867130.2:155..3490"
                     /db_xref="GeneID:107934650"
ORIGIN      
        1 mgntflnlal liifhfsmpt fsmklttilt dqsallalkd hvihdpenvl ttnwsasapv
       61 cnwfgvscgs khrrvtalnl tglglvgtlp phlgnlsfls llyvrnnsfy gglpvqlsnl
      121 rrlkylnfgn nsfsgeipsw lgsltelrrl flgqnnfkgv ipfslgylsk leflylfgnq
      181 isgsipstif nisslqeiyl synmlsgsip svprdlllle vidftsnnlt ghipkdmfdh
      241 lpnlkglyws lnllsgripa slfkckelqm lslsynqmeg slpieignls mlqyiyigrn
      301 hfegeipkqi vnltllmafd cshsnftgii pqeignlknl nwlnlafnni agsippqvfn
      361 istlrtisld tnqlsghlps nmglflpnme qlyldfnhla gsipmyisna sqlthldmss
      421 nyfsgsipdn lgnlrnlkil nlasnnltss gmsflfsltn crvlenllfg snpfinselp
      481 rvvgnlsssl elfsayscni rgsipseign lshlinivlg gnqfigqipt tigalgelqs
      541 lslvynkleg sisselchln klaflfltnn klsgqipacl gdltslrqlf ldsnmfsssi
      601 pstltrlnyl lilylssnsl sgslptdigk wkvltsldls nnqfsgdipt gvadlkdlth
      661 fslsnnrimg sipesfdell slefldlsrn nlsgeipksl eklrylnyfn vsfnrlegei
      721 peggsfgnys iesskgneal cgaarlhvpn cktrplrnsk aktklilyva lpiastilvv
      781 aliiiilqnk rrkdklptqe dmiplgtwrr fsyhelrqat dgfndsrllg ngsygsvfqg
      841 tlpdgtiiav kvfkleleta fksfdvecdv lrntrhrnlv kvisscsndi nfkalvlefm
      901 pngsldkwly snkqyldilq rlnimidvas aleylhhgna tpvvhcdlkt nnilldedmv
      961 ahlsdfgiak llceeasmiq tmtmatfgym apeygmegiv stkgdvysfg illmeiitrk
     1021 kptdemfage rslkswvies issslnqvvd pkllstigre ylkvkncals ilqvgleccv
     1081 elpnerlhmk eivtklkkik vtllrdmerv r
//
LOCUS       XP_040942781            1086 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor kinase-like protein Xa21 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942781
VERSION     XP_040942781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086847.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1086
                     /product="receptor kinase-like protein Xa21 isoform X2"
                     /calculated_mol_wt=120564
     Region          10..993
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          364..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..412
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          413..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..460
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          461..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..657
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          658..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          682..703
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1086
                     /gene="LOC107934650"
                     /coded_by="XM_041086847.1:156..3416"
                     /db_xref="GeneID:107934650"
ORIGIN      
        1 mgntflnlal liifhfsmpt fsmklttilt dqsallalkd hvihdpenvl ttnwsasapv
       61 cnwfgvscgs khrrvtalnl tglglvgtlp phlgnlsfls llyvrnnsfy gglpvqlsnl
      121 rrlkylnfgn nsfsgeipsw lgsltelrrl flgqnnfkgv ipfslgylsk leflylfgnq
      181 isgsipstif nisslqeiyl synmlsgsip svprdlllle vidftsnnlt ghipkdmfdh
      241 lpnlkglyws lnllsgripa slfkckelqm lslsynqmeg slpieignls mlqyiyigrn
      301 hfegeipkqi vnltllmafd cshsnftgii pqeignlknl nwlnlafnni agsippqvfn
      361 istlrtisld tnqlsghlps nmglflpnme qlyldfnhla gsipmyisna sqlthldmss
      421 nyfsgsipdn lgnlrnlkil nlasnnltss gmsflfsltn crvlenllfg snpfinselp
      481 rvvgnlsssl elfsayscni rgsipseign lshlinivlg gnqfigqipt tigalgelqs
      541 lslvynkleg sisselchln klaflfltnn klsgqipacl gdltslrqlf ldsnmfsssi
      601 pstltrlnyl lilylssnsl sgslptdigk wkvltsldls nnqfsgdipt gvadlkdlth
      661 fslsnnrimg sipesfdell slefldlsrn nlsgeipksl eklrylnyfn vsfnrlegei
      721 peggsfgnys iesskgneal cgaarlhvpn cktrplrnsk aktklilyva lpiastilvv
      781 aliiiilqnk rrkdklptqe dmiplgtwrr fsyhelrqat dgfndsrllg ngsygsvfqg
      841 tlpdgtiiav kvfkleleta fksfdvecdv lrntrhrnlv kvisscsndi nfkalvlefm
      901 pngsldkwly snkqyldilq rlnimidvas aleylhhgna tpvvhcdlkt nnilldedmv
      961 ahlsdfgiak llceeasmiq tmtmatfgym apeygmegiv stkgerslks wviesisssl
     1021 nqvvdpklls tigreylkvk ncalsilqvg leccvelpne rlhmkeivtk lkkikvtllr
     1081 dmervr
//
LOCUS       XP_016722620             801 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase EFR isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016722620
VERSION     XP_016722620.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867131.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722620.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..801
                     /product="LRR receptor-like serine/threonine-protein
                     kinase EFR isoform X3"
                     /calculated_mol_wt=89470
     Region          30..68
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          78..787
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          99..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          519..789
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(519..522,525,527,539,541,570,587..590,637,641..642,
                     644,654..655)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..801
                     /gene="LOC107934650"
                     /coded_by="XM_016867131.2:157..2562"
                     /db_xref="GeneID:107934650"
ORIGIN      
        1 mgntflnlal liifhfsmpt fsmklttilt dqsallalkd hvihdpenvl ttnwsasapv
       61 cnwfgvscgs khrrvtalnl tglglvgtlp phlgnlsfls llyvrnnsfy gglpvqlsnl
      121 rrlkylnfgn nsfsgeipsw lgsltelrrl flgqnnfkgv ipfslgylsk leflylfgnq
      181 isgsipstif nisslqeiyl synmlsgsip svprdlllle vidftsnnlt ghipkdmfdh
      241 lpnlkglyws lnllsgripa slfkckelqm lslsynqmeg slpieignls mlqyiyigrn
      301 hfegeipkqi vnltllmafd cshsnftgii pqeignlknl nwlnlafnni agsippqvfn
      361 istlrtisld tnqlsghlps nmglflpnme qlyldfnhla gsipmlegei peggsfgnys
      421 iesskgneal cgaarlhvpn cktrplrnsk aktklilyva lpiastilvv aliiiilqnk
      481 rrkdklptqe dmiplgtwrr fsyhelrqat dgfndsrllg ngsygsvfqg tlpdgtiiav
      541 kvfkleleta fksfdvecdv lrntrhrnlv kvisscsndi nfkalvlefm pngsldkwly
      601 snkqyldilq rlnimidvas aleylhhgna tpvvhcdlkt nnilldedmv ahlsdfgiak
      661 llceeasmiq tmtmatfgym apeygmegiv stkgdvysfg illmeiitrk kptdemfage
      721 rslkswvies issslnqvvd pkllstigre ylkvkncals ilqvgleccv elpnerlhmk
      781 eivtklkkik vtllrdmerv r
//
LOCUS       XP_016722629             731 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor kinase-like protein Xa21 [Gossypium hirsutum].
ACCESSION   XP_016722629
VERSION     XP_016722629.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722629.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..731
                     /product="receptor kinase-like protein Xa21"
                     /calculated_mol_wt=81146
     Region          <7..717
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          8..31
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          32..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          83..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..719
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(449..452,455,457,469,471,500,517..520,567,571..572,
                     574,584..585)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..731
                     /gene="LOC107934660"
                     /coded_by="XM_016867140.2:127..2322"
                     /db_xref="GeneID:107934660"
ORIGIN      
        1 mglflpnmee lylgdnhlvg sipmyisnas qltlldmsnn nfsgsipdnl gnlrnlkllt
       61 vennsltspg msflfsltnc rvlenllfgs npfisselpr vvgnlsssle lfssyscnir
      121 gsipseignl shlinielgg nqfigqiptt iggleelqsl alvynklegs isselchlnk
      181 laflfltnnk lsgpipaclg dltslrqlfl dsnmfsssip stltrlnyll vlnlssnsls
      241 gplptdigkw kvltsldlsn nqfsgdiptg vadlkdltyf slsnnrimgs ipesfdells
      301 lefldlsrnn lsgeipkslk klrylkyfnv tfnrlegkip eggsfgnyti esfkgnealc
      361 gatrlhvpnc ktrplrnska ktklkliiyv alpiastilv valiiiilqn rrkdklptqe
      421 dmiplgtwrr fsyhelrqat dgfndsrllg ngsygsvfqg tlqdgtvfav kvfklelega
      481 fksfdvecdv lrntrhrnlv kvisscsndl nfkalvlefm pngsldkwly snnqyldivq
      541 rlnimidvas aleylhhgna tpvvhcdlkp nnvlidedmv ahlsdfgiak llceevsmiq
      601 tmtmatfgym apeygiegiv stkgdvysfg illmeiitrk kptdemfege rslkswvies
      661 issslnqvvd pkllstigre hlkvkncals ilqvglecsa elpnerlhmk evvtklkkik
      721 vklsrdmqrv r
//
LOCUS       XP_016722645             329 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase EFR [Gossypium
            hirsutum].
ACCESSION   XP_016722645
VERSION     XP_016722645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="LRR receptor-like serine/threonine-protein
                     kinase EFR"
                     /calculated_mol_wt=36326
     Region          30..68
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          75..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          78..>328
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          99..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..329
                     /gene="LOC107934676"
                     /coded_by="XM_016867156.2:59..1048"
                     /db_xref="GeneID:107934676"
ORIGIN      
        1 mgntflnlal liifhfsmpt fsmkfttilt dqsallalkd hfihdpknvl tinwstsapv
       61 cnwfgvscgs khrrvtaldl tglglvgtlp phlgnlsfls llfvtnnsfy sglpvqlsnl
      121 rrlkylscgn nsfsgeipsw lgsltelrrl flyqnnfkgv ipfslgylsk leilslyenq
      181 vsgsipssif nvsslqkidl sdntlsgsip svprallsle lidfasnnls ghipkdmfdh
      241 lpnlkelslg lnllsgtipa slfkckelql lslvynkmeg slpieignls mlqyiyigrn
      301 hfegeipkqi vnltlltlfd ccqnnftge
//
LOCUS       XP_040942782             212 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor kinase-like protein Xa21 [Gossypium hirsutum].
ACCESSION   XP_040942782
VERSION     XP_040942782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086848.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="receptor kinase-like protein Xa21"
                     /calculated_mol_wt=24033
     Region          <1..194
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..212
                     /gene="LOC107934668"
                     /coded_by="XM_041086848.1:640..1278"
                     /db_xref="GeneID:107934668"
ORIGIN      
        1 mpngsldkwl ysnnqyldiv qrlnimidva saleylhhgn atpvvhcdlk phnvlldedm
       61 vahlsdfgia kllceevsmi qtmtmatfey mapeygiegi vstkgdvysf gillmeiitr
      121 kkptdemfeg erslkswvie sissslnqvv dpkllstigr ehlkvkncal silqlslecc
      181 velpnerlhm keivtklkki kvkllrdmer vr
//
LOCUS       XP_040942783             594 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent DNA helicase 2 subunit KU70 [Gossypium hirsutum].
ACCESSION   XP_040942783
VERSION     XP_040942783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086849.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..594
                     /product="ATP-dependent DNA helicase 2 subunit KU70"
                     /calculated_mol_wt=67055
     Region          26..576
                     /region_name="ku70"
                     /note="ATP-dependent DNA helicase II, 70 kDa subunit
                     (ku70); TIGR00578"
                     /db_xref="CDD:273151"
     CDS             1..594
                     /gene="LOC107934687"
                     /coded_by="XM_041086849.1:146..1930"
                     /db_xref="GeneID:107934687"
ORIGIN      
        1 mdldpedvfk deeddpdnef fqqsesskey vvylvdasrk mfsttcpgnd qkdethfhta
       61 vsciagslkt qiisrsydev aicffntrek knlqdlngvf vfnvaerehl drptarlike
      121 fdcieesfmr eigsqygivp gsrenslyna lwvaqallrk gsiktadkri llftneddpf
      181 gslqdaakkd mtrttlqrak daqdlgisie llplsrpdse fnvstfyadl igldgedlaq
      241 fmpsasqkle dmkdqlrkrm ftkrvvrrig fhianglsie lntyalirpt vpgaitwlds
      301 vtnhplkter slicedtgal iqeppklfqp yrnenvkflp eeiaeikris pgklrllgfk
      361 plsclkdyyn lrpstfvyas dqevvgstci fialhrsmlk hnrfavayyg asnhpqlval
      421 vaqdeitsag aqmeppgmhm iylpysddir ddeeifpdte edapradedq iqkaaalikr
      481 iyvkdfsafq fanpalqrhy avlqalalae ddipettdet apdeegltrp avvraaeafk
      541 hsvygdsyde esdmgkekms easrkrkaia enaakdydwg nladkgsptw nvfs
//
LOCUS       XP_016722659             667 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.1 [Gossypium hirsutum].
ACCESSION   XP_016722659
VERSION     XP_016722659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867170.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..667
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.1"
                     /calculated_mol_wt=74019
     Region          39..104
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          167..260
                     /region_name="WAK_assoc"
                     /note="Wall-associated receptor kinase C-terminal;
                     pfam14380"
                     /db_xref="CDD:464161"
     Region          360..628
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(360..363,366,368,380,382,410,426..429,481,485..486,
                     488,498..499)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..667
                     /gene="LOC107934688"
                     /coded_by="XM_016867170.2:326..2329"
                     /db_xref="GeneID:107934688"
ORIGIN      
        1 mplfisaisy pllvlftiil wsvqvpplls ssnehyvgcs kqfhcgkikn vsypfwggdr
       61 peycgqpglk ltcledeetq itimsvsykv ieininlqaf tvaridylqs lcpqtllntt
      121 lnfnllsyaw nlenitlyyh cplisnissg fpslfncsts ngadmvnyyv iasvlgnlst
      181 evkdglrscd shvivpafyt avetikrnpt pdtlvlplgn gfglkwdani askcedcngs
      241 ggrcgynnsl nqftcycpnh tdastclqsg ssvgtslkik liigftvvga timvvcfmvf
      301 alrlkkgsls sgmlmslqrn krknseriea fimrygsdla pkrysysdik kitksfkdkl
      361 geggfgsvyk gklpggrlva vkvlsesred geefinevas isrtshvnvv tflgfcyess
      421 irallyefmp ngsldkyiyh hrspdkscil nrktmfeiav gvargleylh rgcntrilhl
      481 dikphnilld enfvpkisdf glaklcerkg silssitarg tigyiapelf crnfggvsyk
      541 advysygmmv lemvgakeni hvggpltsem nfpswiykhl eqeafnlegi tvedeeitrk
      601 miivslwciq tnpsdrpsmt kvlemlqgnl qslatpprpf lfspqrsppn slsaisffas
      661 sitmnie
//
LOCUS       XP_016722625             685 aa            linear   PLN 06-AUG-2024
DEFINITION  LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
            2.1 [Gossypium hirsutum].
ACCESSION   XP_016722625
VERSION     XP_016722625.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867136.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722625.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..685
                     /product="LEAF RUST 10 DISEASE-RESISTANCEUS RECEPTOR-LIKE
                     PROTEIN KINASE-like 2.1"
                     /calculated_mol_wt=75590
     Region          57..122
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          185..278
                     /region_name="WAK_assoc"
                     /note="Wall-associated receptor kinase C-terminal;
                     pfam14380"
                     /db_xref="CDD:464161"
     Region          378..646
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(378..381,384,386,398,400,428,444..447,499,503..504,
                     506,516..517)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..685
                     /gene="LOC107934656"
                     /coded_by="XM_016867136.2:144..2201"
                     /db_xref="GeneID:107934656"
ORIGIN      
        1 mkifakfslk lvllpnnmas fnisatsssl vffiiiilll aqvptlssss ndnymvcskq
       61 fhcgnlknvs ypfwggdrpe ncgqpglklt clegeetqit imsvsykvie inmdiqaftv
      121 artdylqnlc pqtllnttln fnllsyawnl enitlyyhcp lisnissgfp slfncstgng
      181 tdmvnyyvia svlgnlstev kdglrscdsh vivpafytav etiksnptpd tlvlplgngf
      241 glkwdanias kcedcngsgg rcgynkssnq ftcycpnhtd astcllsgss egtglkikli
      301 igfavvgvtv mviclvafal klkkgslssg tlmnlqqnis kntkrveafi mrygselapk
      361 rysysdikki tksfkdklge ggfgtvykgk lpdgclvavk vlsesredge efinevasis
      421 rtshvnvvtf lgfcyessmr alfyefmpng sldkfiyqhg spdkicmlnr ktlfeiavgi
      481 argleylhrg cntrilhldi kphnillden fvpkisdfgl aklcerkesi lssitargti
      541 gyiapelfcr nfggisyksd vysygmmvle mvgarenvha grsltsemnf hswiykhlpq
      601 eafnlegita edeeitkkmi ivslwciqtn psdrpsmtkv lemlqgnlqs laipprpflf
      661 spqqsppnts stislfassi tmnte
//
LOCUS       XP_016722655             325 aa            linear   PLN 06-AUG-2024
DEFINITION  BES1/BZR1 homolog protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016722655
VERSION     XP_016722655.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867166.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="BES1/BZR1 homolog protein 4 isoform X1"
                     /calculated_mol_wt=34938
     Region          31..130
                     /region_name="BES1_N"
                     /note="BES1/BZR1 plant transcription factor, N-terminal;
                     pfam05687"
                     /db_xref="CDD:461715"
     CDS             1..325
                     /gene="LOC107934685"
                     /coded_by="XM_016867166.2:714..1691"
                     /db_xref="GeneID:107934685"
ORIGIN      
        1 mtsgtrlptw kerennkrre rrrraiaaki faglrmygny klpkhcdnne vlkalcneag
       61 wtvepdgtty rngckpverm divggsatvs pcssyhpspr asynpspass sfpspasssy
      121 vvnpngdvns lfpwlknlss asssassskr pysyihggsi sapvtpplss ptartprmkn
      181 dwedqsalpg wsaqqhsflp sstppspgrq ivpdpewfsg lqtphsrpts ptfslvssnp
      241 fgfkeevlag ggsrmwtpgq sgtcspaiaa gldqtadvpm sevisdefaf gsnatglvkp
      301 wegeriheec gsddleltlg ssktr
//
LOCUS       XP_016722656             325 aa            linear   PLN 06-AUG-2024
DEFINITION  BES1/BZR1 homolog protein 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016722656
VERSION     XP_016722656.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867167.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="BES1/BZR1 homolog protein 4 isoform X2"
                     /calculated_mol_wt=34938
     Region          31..130
                     /region_name="BES1_N"
                     /note="BES1/BZR1 plant transcription factor, N-terminal;
                     pfam05687"
                     /db_xref="CDD:461715"
     CDS             1..325
                     /gene="LOC107934685"
                     /coded_by="XM_016867167.2:488..1465"
                     /db_xref="GeneID:107934685"
ORIGIN      
        1 mtsgtrlptw kerennkrre rrrraiaaki faglrmygny klpkhcdnne vlkalcneag
       61 wtvepdgtty rngckpverm divggsatvs pcssyhpspr asynpspass sfpspasssy
      121 vvnpngdvns lfpwlknlss asssassskr pysyihggsi sapvtpplss ptartprmkn
      181 dwedqsalpg wsaqqhsflp sstppspgrq ivpdpewfsg lqtphsrpts ptfslvssnp
      241 fgfkeevlag ggsrmwtpgq sgtcspaiaa gldqtadvpm sevisdefaf gsnatglvkp
      301 wegeriheec gsddleltlg ssktr
//
LOCUS       XP_016722662             519 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722662
VERSION     XP_016722662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867173.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=56792
     Region          204..271
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          312..513
                     /region_name="SYLF_FYVE"
                     /note="The SYLF domain (also called DUF500), a novel
                     lipid-binding module, of FYVE zinc finger domain
                     containing proteins; cd11526"
                     /db_xref="CDD:211402"
     Site            312..325
                     /site_type="other"
                     /note="putative amphipathic alpha helix"
                     /db_xref="CDD:211402"
     CDS             1..519
                     /gene="LOC107934692"
                     /coded_by="XM_016867173.2:136..1695"
                     /db_xref="GeneID:107934692"
ORIGIN      
        1 meglikypki epednqfqfl ssqdlekvde srekctlvdt dvmqdgkqlk rsesevhprv
       61 sgcnsmeils idgnqkkgea fyydtpfsee tgvwvpvsvp pvsenkheew drglclnggy
      121 fpddgvrsnq figeskdltm wdvfsemlia argkvssias gdvqrygitw lsshlleqtw
      181 kemaqtlaea nfgnvneile aeppkwlads aasncmlcnv rfhpimrsrh hcrfcggifc
      241 necskgrsll ptkfhmgnpq rvcdvccvrl epvqpylmdh icraaqlpth dltdlstlrs
      301 wlnfpwgqsm eyeiykaant isnyskvgsl kpeksipdai lrqakglail tvakvgvmvt
      361 ynigtglvva rrddgswspp saisscgvgw giqaggeftd fiivlrness vatfsgnmhl
      421 svgaglsaaa givgraaead irggsggyaa cytyscskga flgcslegsv vttrnqensr
      481 fygnpsitas dillgslpmp paastlyqal snlfekler
//
LOCUS       XP_016722663             477 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722663
VERSION     XP_016722663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867174.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..477
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=51891
     Region          162..229
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          270..471
                     /region_name="SYLF_FYVE"
                     /note="The SYLF domain (also called DUF500), a novel
                     lipid-binding module, of FYVE zinc finger domain
                     containing proteins; cd11526"
                     /db_xref="CDD:211402"
     Site            270..283
                     /site_type="other"
                     /note="putative amphipathic alpha helix"
                     /db_xref="CDD:211402"
     CDS             1..477
                     /gene="LOC107934692"
                     /coded_by="XM_016867174.2:230..1663"
                     /db_xref="GeneID:107934692"
ORIGIN      
        1 mqdgkqlkrs esevhprvsg cnsmeilsid gnqkkgeafy ydtpfseetg vwvpvsvppv
       61 senkheewdr glclnggyfp ddgvrsnqfi geskdltmwd vfsemliaar gkvssiasgd
      121 vqrygitwls shlleqtwke maqtlaeanf gnvneileae ppkwladsaa sncmlcnvrf
      181 hpimrsrhhc rfcggifcne cskgrsllpt kfhmgnpqrv cdvccvrlep vqpylmdhic
      241 raaqlpthdl tdlstlrswl nfpwgqsmey eiykaantis nyskvgslkp eksipdailr
      301 qakglailtv akvgvmvtyn igtglvvarr ddgswsppsa isscgvgwgi qaggeftdfi
      361 ivlrnessva tfsgnmhlsv gaglsaaagi vgraaeadir ggsggyaacy tyscskgafl
      421 gcslegsvvt trnqensrfy gnpsitasdi llgslpmppa astlyqalsn lfekler
//
LOCUS       XP_016722651             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_016722651
VERSION     XP_016722651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867162.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53074
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,364..365)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107934683"
                     /coded_by="XM_016867162.2:305..1792"
                     /db_xref="GeneID:107934683"
ORIGIN      
        1 mgspaepkrr vafvlidglg dvsiprfgnk tplqaadvpn ldaiasagvn glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcaaldrmk lpslpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelsrei skilvshpln akrlaegksv anivllrgcg
      241 irievpqfek khglwpcmva ptkiiaglgl sldidileap gatgdyrtll tskataiaka
      301 lstplqtsps vfvpgedehk pgrsdgydfg flhikaidda ghdkasvfkv kgleavdrai
      361 aqlakllwqa estgdfqyfi cvtgdhstpv eygdhsyepv pfticrlkdf vgavggessv
      421 letsldpfpl ptvktgedln eaiglekgrk ckqvqafcgd svfefneiaa argclgrfpg
      481 gemmgiirkf lklna
//
LOCUS       XP_016722654             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_016722654
VERSION     XP_016722654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53074
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,364..365)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107934683"
                     /coded_by="XM_016867165.2:323..1810"
                     /db_xref="GeneID:107934683"
ORIGIN      
        1 mgspaepkrr vafvlidglg dvsiprfgnk tplqaadvpn ldaiasagvn glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcaaldrmk lpslpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelsrei skilvshpln akrlaegksv anivllrgcg
      241 irievpqfek khglwpcmva ptkiiaglgl sldidileap gatgdyrtll tskataiaka
      301 lstplqtsps vfvpgedehk pgrsdgydfg flhikaidda ghdkasvfkv kgleavdrai
      361 aqlakllwqa estgdfqyfi cvtgdhstpv eygdhsyepv pfticrlkdf vgavggessv
      421 letsldpfpl ptvktgedln eaiglekgrk ckqvqafcgd svfefneiaa argclgrfpg
      481 gemmgiirkf lklna
//
LOCUS       XP_040942784             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_040942784
VERSION     XP_040942784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086850.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53074
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,364..365)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107934683"
                     /coded_by="XM_041086850.1:286..1773"
                     /db_xref="GeneID:107934683"
ORIGIN      
        1 mgspaepkrr vafvlidglg dvsiprfgnk tplqaadvpn ldaiasagvn glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcaaldrmk lpslpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelsrei skilvshpln akrlaegksv anivllrgcg
      241 irievpqfek khglwpcmva ptkiiaglgl sldidileap gatgdyrtll tskataiaka
      301 lstplqtsps vfvpgedehk pgrsdgydfg flhikaidda ghdkasvfkv kgleavdrai
      361 aqlakllwqa estgdfqyfi cvtgdhstpv eygdhsyepv pfticrlkdf vgavggessv
      421 letsldpfpl ptvktgedln eaiglekgrk ckqvqafcgd svfefneiaa argclgrfpg
      481 gemmgiirkf lklna
//
LOCUS       XP_040942785             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2,3-bisphosphoglycerate-independent phosphoglycerate
            mutase [Gossypium hirsutum].
ACCESSION   XP_040942785
VERSION     XP_040942785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086851.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..495
                     /product="probable 2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /calculated_mol_wt=53074
     Region          9..491
                     /region_name="iPGM_like"
                     /note="uncharacterized subfamily of alkaline phosphatase,
                     homologous to 2 3 bisphosphoglycerate independent
                     phosphoglycerate mutase (iPGM) and bacterial
                     phosphopentomutases; cd16011"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,342,385..386,395)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293735"
     Site            order(17,64,338,386)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293735"
     Site            order(92,94,143,150,270,277,291,295..296,364..365)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293735"
     CDS             1..495
                     /gene="LOC107934683"
                     /coded_by="XM_041086851.1:291..1778"
                     /db_xref="GeneID:107934683"
ORIGIN      
        1 mgspaepkrr vafvlidglg dvsiprfgnk tplqaadvpn ldaiasagvn glmdpvevgl
       61 gcgsdtahls llgydprvyy rgrgafesmg aglamspgdi afksnfatld ektgivtsrr
      121 adrhfeeegp ilcaaldrmk lpslpeyevr vryatehrcg vvvkgprlsg nisgtdplkd
      181 nrllleakal ddtdearhta avvnelsrei skilvshpln akrlaegksv anivllrgcg
      241 irievpqfek khglwpcmva ptkiiaglgl sldidileap gatgdyrtll tskataiaka
      301 lstplqtsps vfvpgedehk pgrsdgydfg flhikaidda ghdkasvfkv kgleavdrai
      361 aqlakllwqa estgdfqyfi cvtgdhstpv eygdhsyepv pfticrlkdf vgavggessv
      421 letsldpfpl ptvktgedln eaiglekgrk ckqvqafcgd svfefneiaa argclgrfpg
      481 gemmgiirkf lklna
//
LOCUS       XP_016743538             470 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743538
VERSION     XP_016743538.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888049.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=51626
     Region          62..>119
                     /region_name="PSI_PsaH"
                     /note="Photosystem I reaction centre subunit VI; cl03956"
                     /db_xref="CDD:470918"
     CDS             1..470
                     /gene="LOC107952851"
                     /coded_by="XM_016888049.2:641..2053"
                     /db_xref="GeneID:107952851"
ORIGIN      
        1 msversfeaw eevqrrgqdl adrlaqgftg liqshitpps fpwpnppksk lfdlefpsqs
       61 fvnkdfglpi dkstmfdigd ignrigqvga dfsaglnglv qqffrslpip frteegavlp
      121 vrgdmilkvq kaevggndme glvgfsdrsk dfgflenesg seglvdeels gfnlksagll
      181 grpqqgtini tstyesrtrd lesslvargd lwrveasngs stsgsdnslf llqlgpvlfv
      241 rdttlllpvh lskqhllwyg ydrkngmhsl cpavwskhrr wllmsmlcln placsfvdlq
      301 fpngqftyvs geglttsafl picggllqaq gqypgemrys fscknkwgtr vtpmvqwpdk
      361 sftlglsqel awkqsglmmr psvqfslfpt fggsnpglrt evihtvkedl nlicgcavva
      421 hpsafasisf grskwngnvg ksgivvrvdt plssvgrpsf svqinnvief
//
LOCUS       XP_016743539             469 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743539
VERSION     XP_016743539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016888050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=51498
     Region          62..>119
                     /region_name="PSI_PsaH"
                     /note="Photosystem I reaction centre subunit VI; cl03956"
                     /db_xref="CDD:470918"
     CDS             1..469
                     /gene="LOC107952851"
                     /coded_by="XM_016888050.2:627..2036"
                     /db_xref="GeneID:107952851"
ORIGIN      
        1 msversfeaw eevqrrgqdl adrlaqgftg liqshitpps fpwpnppksk lfdlefpsqs
       61 fvnkdfglpi dkstmfdigd ignrigqvga dfsaglnglv qqffrslpip frteegavlp
      121 vrgdmilkvq kaevggndme glvgfsdrsk dfgflenesg seglvdeels gfnlksagll
      181 grpqgtinit styesrtrdl esslvargdl wrveasngss tsgsdnslfl lqlgpvlfvr
      241 dttlllpvhl skqhllwygy drkngmhslc pavwskhrrw llmsmlclnp lacsfvdlqf
      301 pngqftyvsg eglttsaflp icggllqaqg qypgemrysf scknkwgtrv tpmvqwpdks
      361 ftlglsqela wkqsglmmrp svqfslfptf ggsnpglrte vihtvkedln licgcavvah
      421 psafasisfg rskwngnvgk sgivvrvdtp lssvgrpsfs vqinnvief
//
LOCUS       XP_040942787             444 aa            linear   PLN 06-AUG-2024
DEFINITION  APO protein 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040942787
VERSION     XP_040942787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086853.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..444
                     /product="APO protein 1, chloroplastic"
                     /calculated_mol_wt=49835
     Region          42..444
                     /region_name="PLN00111"
                     /note="accumulation of photosystem one; Provisional"
                     /db_xref="CDD:215059"
     CDS             1..444
                     /gene="LOC107952853"
                     /coded_by="XM_041086853.1:194..1528"
                     /db_xref="GeneID:107952853"
ORIGIN      
        1 mlqtlstass lwnpsqrsac leivefqrsq lsslspcpfy lkfgsksvqk gralvsgtfp
       61 yacqrpkqyp askkpgeypq nmdlppvlpk kkkkpypipf keiqkaarkd kklaergvek
      121 plqppkngll vpelipvaye vldawkllie glaqllhvip vygcsdcsev hvahsghniq
      181 dckgprsskr rglhswvkgs indilipies yhlydpfgrr ikhetrfdyd ripavvelci
      241 qagvdipeyp srrrtnpirm igkkiidrgg yveepkpwra vdpssssiid ldtcgacerf
      301 pppspedvpi iaqetmnahe tvqtgvtklm kkytvkacgy csevhvgpwg hnaklcgefk
      361 hqwrdgkhgw qdatvsevfp pnyvwhvqdp kgppmrsalk ryygkapavv elcmqagaqv
      421 prrykpmmrl diivpeseea slva
//
LOCUS       XP_016747617             109 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016747617
VERSION     XP_016747617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016892128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11912
     CDS             1..109
                     /gene="LOC107956466"
                     /coded_by="XM_016892128.2:78..407"
                     /db_xref="GeneID:107956466"
ORIGIN      
        1 msesspcsss ppsspgssal aspsiqmvsk svserllgkf fdasqydfdy eqsclwsppv
       61 rrsvyltspg nivlcsqdel ifsqlkhakk ackwrfrsia cfsalwccs
//
LOCUS       XP_040942788             151 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin-like protein 4B [Gossypium hirsutum].
ACCESSION   XP_040942788
VERSION     XP_040942788.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086854.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="thioredoxin-like protein 4B"
                     /calculated_mol_wt=17107
     Region          11..125
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     CDS             1..151
                     /gene="LOC121213779"
                     /coded_by="XM_041086854.1:113..568"
                     /db_xref="GeneID:121213779"
ORIGIN      
        1 msyllptltr kkevdtiird tidkvlvlrf graddavclq lddilaktar evskfatval
       61 vdvdsddvqv yvkyfditli pstifffnah hmkmdsgtad htkwvgafhe kqdfidvvea
      121 ifrgamkgkl ivncplpper ipkyqllykd v
//
LOCUS       XP_040942789             545 aa            linear   PLN 06-AUG-2024
DEFINITION  anaphase-promoting complex subunit 6 [Gossypium hirsutum].
ACCESSION   XP_040942789
VERSION     XP_040942789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086855.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="anaphase-promoting complex subunit 6"
                     /calculated_mol_wt=62856
     Region          19..97
                     /region_name="ANAPC3"
                     /note="Anaphase-promoting complex, cyclosome, subunit 3;
                     pfam12895"
                     /db_xref="CDD:463743"
     Region          250..376
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          311..339
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          339..>536
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          345..373
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          383..407
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          413..441
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(414,417..418,421..422,424,449,456..457,460..461,
                     463..464,487,490..491,494..495,498)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          447..481
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          486..513
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..545
                     /gene="LOC121213780"
                     /coded_by="XM_041086855.1:140..1777"
                     /db_xref="GeneID:121213780"
ORIGIN      
        1 mreeeierlr gvvrdcvskh lyssaiffad kvaaitndpa diymqaqalf lgrhfrrayh
       61 llnaskivfr dlrfrylaak cleelkewdq clfmlgdekl dehgdayetk dnsdmyldkd
      121 gedremniss aicflrgkay ealenraqar lwykaaikad plcyealecl venhmltcee
      181 etsllsslqf gpedgwlssf ysclikkydk envveakfke lekessktdl ssqslmctlk
      241 dntdllacka eyyhqcgeyq kcfeltstll ekdpfhlkct lvhlaaamel gnsnelylma
      301 cnlvkdypqk alswfavgcy yycikkydqs rryfskstsl dgtfapawig fgnayavree
      361 gdqamsayrt aarlfpgchl ptlyigmeym rthsfklaeq fimqakaicp adplvynelg
      421 vvayhmkeyn qavwwfektl alipnplsem weptvvnlah ayrklkmfre aisfyekalt
      481 lstkslstya glaytyhlqd nftsaityyh kalwlkpddp fctemlnial adecrhgiep
      541 kidfh
//
LOCUS       XP_040942790             237 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-related protein isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942790
VERSION     XP_040942790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086856.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..237
                     /product="pathogen-related protein isoform X1"
                     /calculated_mol_wt=26715
     Region          <125..204
                     /region_name="COG5485"
                     /note="Predicted ester cyclase [General function
                     prediction only]"
                     /db_xref="CDD:444236"
     CDS             1..237
                     /gene="LOC121203059"
                     /coded_by="XM_041086856.1:54..767"
                     /db_xref="GeneID:121203059"
ORIGIN      
        1 matvpaakdk yrsflddead nvqwrhgapp syddvnqlfe qgrtkeweeg sleeivqnai
       61 ktwemelshk vrlqdfksin hekfnlivng reglkgeeal kmgsynallk nslpkefqyy
      121 kadeesfess heafrsafpr gfawevihvy sgppliafkf rhwgifegpf kghaptgetv
      181 efygiatvkv deglkveeve vyydpaqlfg gllkappisi ssspthhasa cpfhsss
//
LOCUS       XP_040942791             196 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-related protein isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942791
VERSION     XP_040942791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086857.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..196
                     /product="pathogen-related protein isoform X2"
                     /calculated_mol_wt=22493
     Region          <125..>186
                     /region_name="COG5485"
                     /note="Predicted ester cyclase [General function
                     prediction only]"
                     /db_xref="CDD:444236"
     CDS             1..196
                     /gene="LOC121203059"
                     /coded_by="XM_041086857.1:54..644"
                     /db_xref="GeneID:121203059"
ORIGIN      
        1 matvpaakdk yrsflddead nvqwrhgapp syddvnqlfe qgrtkeweeg sleeivqnai
       61 ktwemelshk vrlqdfksin hekfnlivng reglkgeeal kmgsynallk nslpkefqyy
      121 kadeesfess heafrsafpr gfawevihvy sgppliafkf rhwgifegpf kghaptgetv
      181 efygiatvkm nrltkd
//
LOCUS       XP_040942792             190 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-related protein isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942792
VERSION     XP_040942792.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086858.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..190
                     /product="pathogen-related protein isoform X3"
                     /calculated_mol_wt=21733
     Region          <125..>190
                     /region_name="COG5485"
                     /note="Predicted ester cyclase [General function
                     prediction only]"
                     /db_xref="CDD:444236"
     CDS             1..190
                     /gene="LOC121203059"
                     /coded_by="XM_041086858.1:54..626"
                     /db_xref="GeneID:121203059"
ORIGIN      
        1 matvpaakdk yrsflddead nvqwrhgapp syddvnqlfe qgrtkeweeg sleeivqnai
       61 ktwemelshk vrlqdfksin hekfnlivng reglkgeeal kmgsynallk nslpkefqyy
      121 kadeesfess heafrsafpr gfawevihvy sgppliafkf rhwgifegpf kghaptgetv
      181 efygiatvkv
//
LOCUS       XP_016733769             414 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-1,3/1,6-mannosyltransferase ALG2 [Gossypium hirsutum].
ACCESSION   XP_016733769
VERSION     XP_016733769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..414
                     /product="alpha-1,3/1,6-mannosyltransferase ALG2"
                     /calculated_mol_wt=46297
     Region          15..401
                     /region_name="GT4_ALG2-like"
                     /note="alpha-1,3/1,6-mannosyltransferase ALG2 and similar
                     proteins; cd03805"
                     /db_xref="CDD:340834"
     Site            order(28,221..223,302,324)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340834"
     CDS             1..414
                     /gene="LOC107944455"
                     /coded_by="XM_016878280.2:109..1353"
                     /db_xref="GeneID:107944455"
ORIGIN      
        1 merkkptdsn snsklniaii hpdlgiggae rlivdaavel ashghnvhif tahhdknrcf
       61 eetragifpv tvygdflprh ifyrlhavca ylrcifvalc vlfmwpsfdv iladqvsvvv
      121 pllklkrstk vvfychfpdl llaqhttllr riyrkpidii eelttgmadm ilvnsrftas
      181 tfaktfkhlh argirpavlh pavnvnqfdk pcsfklnfls inrferkkni elavsafaml
      241 rtldgnvdrg snfadadlti aggfdkrlre nveyldelks laerngvagq vnfvtscsta
      301 ernsllsecl cvlytptdeh fgivpleama ahkpviacns ggpvetikng etgflcdpsp
      361 kdfalamakf iqdpemakrm geqarqhvne sfstttfgqr lnqflldvar tkwd
//
LOCUS       XP_016733771             237 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-related protein [Gossypium hirsutum].
ACCESSION   XP_016733771
VERSION     XP_016733771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878282.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..237
                     /product="pathogen-related protein"
                     /calculated_mol_wt=26699
     Region          <125..204
                     /region_name="COG5485"
                     /note="Predicted ester cyclase [General function
                     prediction only]"
                     /db_xref="CDD:444236"
     CDS             1..237
                     /gene="LOC107944456"
                     /coded_by="XM_016878282.2:1..714"
                     /db_xref="GeneID:107944456"
ORIGIN      
        1 matvpagrdk yrsflddead svqwrhggpp tydvvnqlfe qgrtkeweeg sleetvqnai
       61 ktwemelshk vrlqdfksin hekfnlivng reglkgeeal kmgsynallk nslpkefqyy
      121 kadeesfess heafrsafpr gfawevihvy sgppliafkf rhwgifegpf kghaptgekv
      181 efygiatvkv deglkveeve vyydpaqlfg gllkgapisi sssptqdasa cpfhsrs
//
LOCUS       XP_016732275             182 aa            linear   PLN 06-AUG-2024
DEFINITION  axial regulator YABBY 5 [Gossypium hirsutum].
ACCESSION   XP_016732275
VERSION     XP_016732275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876786.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="axial regulator YABBY 5"
                     /calculated_mol_wt=20473
     Region          7..159
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..182
                     /gene="LOC107943058"
                     /coded_by="XM_016876786.2:342..890"
                     /db_xref="GeneID:107943058"
ORIGIN      
        1 mssshnsape qlcyipcnlc niilavnvpc nslfetvtvr cgqcsnlcsv nlaasfqsra
       61 gkdvqvpnyt sseyridlgs ssrcknklpk rattintttq ervvnrppdk rhrapslynq
      121 fikeeiqrik lnnpdithre afstaaknwa rfphihfglm letdnqpkln ddstepfhql
      181 lk
//
LOCUS       XP_016732276             182 aa            linear   PLN 06-AUG-2024
DEFINITION  axial regulator YABBY 5 [Gossypium hirsutum].
ACCESSION   XP_016732276
VERSION     XP_016732276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="axial regulator YABBY 5"
                     /calculated_mol_wt=20473
     Region          7..159
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..182
                     /gene="LOC107943058"
                     /coded_by="XM_016876787.2:302..850"
                     /db_xref="GeneID:107943058"
ORIGIN      
        1 mssshnsape qlcyipcnlc niilavnvpc nslfetvtvr cgqcsnlcsv nlaasfqsra
       61 gkdvqvpnyt sseyridlgs ssrcknklpk rattintttq ervvnrppdk rhrapslynq
      121 fikeeiqrik lnnpdithre afstaaknwa rfphihfglm letdnqpkln ddstepfhql
      181 lk
//
LOCUS       XP_040942794             182 aa            linear   PLN 06-AUG-2024
DEFINITION  axial regulator YABBY 5 [Gossypium hirsutum].
ACCESSION   XP_040942794
VERSION     XP_040942794.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086860.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="axial regulator YABBY 5"
                     /calculated_mol_wt=20473
     Region          7..159
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..182
                     /gene="LOC107943058"
                     /coded_by="XM_041086860.1:215..763"
                     /db_xref="GeneID:107943058"
ORIGIN      
        1 mssshnsape qlcyipcnlc niilavnvpc nslfetvtvr cgqcsnlcsv nlaasfqsra
       61 gkdvqvpnyt sseyridlgs ssrcknklpk rattintttq ervvnrppdk rhrapslynq
      121 fikeeiqrik lnnpdithre afstaaknwa rfphihfglm letdnqpkln ddstepfhql
      181 lk
//
LOCUS       XP_016732280             389 aa            linear   PLN 06-AUG-2024
DEFINITION  tubby-like F-box protein 7 [Gossypium hirsutum].
ACCESSION   XP_016732280
VERSION     XP_016732280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876791.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="tubby-like F-box protein 7"
                     /calculated_mol_wt=43373
     Region          62..106
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(65..66,68..70,73..74,77,96..98,100,103)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438924"
     Site            order(65,69,72..73,76..77,89,91..92,96..98,100)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438924"
     Region          125..384
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..389
                     /gene="LOC107943062"
                     /coded_by="XM_016876791.2:150..1319"
                     /db_xref="GeneID:107943062"
ORIGIN      
        1 mscsspmrkt sclsrrfsrs lrlsartaal ttvstrenhl essstsspss ppplaeaggd
       61 swstllpell veimerveas eemwpdrknv vssacvckkw revtreivka ssqnsgkitf
      121 psclkqpgpr efpnqciikr nkknstffly lalspsftek gkfllaarry rhgahieyfi
      181 sldpnelsqg snayvgklss dflgtnfkiy dsqpphsgak psscrasrrf askqicpqvp
      241 agnfevgqvs ykfnllksrg prrmvcsiqc plpedmadek ylddikmkmp ehassghtil
      301 rnkaprwheh lqcwclnfhg rvtvasvknf qlaatveesq lggkeeeetv lqfgkvgddt
      361 ftmdyrqpls aflafaiclt sfgtklace
//
LOCUS       XP_016732281             142 aa            linear   PLN 06-AUG-2024
DEFINITION  multiprotein-bridging factor 1a [Gossypium hirsutum].
ACCESSION   XP_016732281
VERSION     XP_016732281.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876792.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732281.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="multiprotein-bridging factor 1a"
                     /calculated_mol_wt=15533
     Region          10..77
                     /region_name="MBF1"
                     /note="Multiprotein bridging factor 1; pfam08523"
                     /db_xref="CDD:462508"
     Region          78..138
                     /region_name="aMBF1"
                     /note="Archaeal ribosome-binding protein aMBF1, putative
                     translation factor, contains Zn-ribbon and HTH domains
                     [Translation, ribosomal structure and biogenesis];
                     COG1813"
                     /db_xref="CDD:441418"
     CDS             1..142
                     /gene="LOC107943063"
                     /coded_by="XM_016876792.2:123..551"
                     /db_xref="GeneID:107943063"
ORIGIN      
        1 magigpltqd wepvvirkkp pnaatkkdek vvnaarraga eiesvkksna gtnkaassst
       61 tlntrkldee tenlahervp telkkaimha rmekkltqsq laqminekpq iiqeyesgka
      121 ipnqqiigkl eralgaklrg kk
//
LOCUS       XP_016732278             646 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732278
VERSION     XP_016732278.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732278.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..646
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=72505
     CDS             1..646
                     /gene="LOC107943060"
                     /coded_by="XM_016876789.2:183..2123"
                     /db_xref="GeneID:107943060"
ORIGIN      
        1 mnpydekrlr deviylhylw eqgppqttnq thqkrprpst qnpinrrkfa hsgshpppkp
       61 dpgldwsvll kptspsspgw pepkskpdpm vrpvsiedqa rfanmqmqnk vldgckeffk
      121 krvrdeendd gddddvdvde eeeknevdmf fmrifvnnse lrgyyeenhe kgeffclvcg
      181 gigenlgkkf qgcvglvqhc msisktkckt ghrafglvvc kvlgwdidrl pvillkgepl
      241 srilansses qntlqgegsn knvenletgn ssgevwedas dslhcrcgvg iswtieqdyy
      301 dkgddlnvil gdvefvnadg ngsvkkevss ddqsngelma cnmsnnslee evanenvesl
      361 eisdgepnkg svndlglgss qvtntgwpci esidvststt pewpsfepct asithvisae
      421 eqirinmvqw qlnvfdackq flsttagsds deddnefded dlmdddgsnd snefnfflrl
      481 ftennelrsy yethcrdgdf wclvcrgigk kdwrifkdcv gliqhstais ktkrkqahra
      541 fgqvickvln wdvdhlpsim lknkpyshsi nhaltdksks esgskedvda hqnnillmns
      601 entlneepdk danlenraln iganedkpen pmkssgennt kseadq
//
LOCUS       XP_016732279             629 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732279
VERSION     XP_016732279.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876790.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732279.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=70493
     CDS             1..629
                     /gene="LOC107943060"
                     /coded_by="XM_016876790.2:197..2086"
                     /db_xref="GeneID:107943060"
ORIGIN      
        1 mnpydekrlr deviylhylw eqgppqttnq thqkrprpst qnpinrrkfa hsgshpppkp
       61 dpgldwsvll kptspsspgw pepkskpdpm vrpvsiedqa rfanmqmqnk vldgckeffk
      121 krvrdeendd gddddvdvde eeeknevdmf fmrifvnnse lrgyyeenhe kgeffclvcg
      181 gigenlgkkf qgcvglvqhc msisktkckt ghrafglvvc kvlgwdidrl pvillkgepl
      241 srilansses qntlqgegsn knvenletgn ssgevwedas dsldkgddln vilgdvefvn
      301 adgngsvkke vssddqsnge lmacnmsnns leeevanenv esleisdgep nkgsvndlgl
      361 gssqvtntgw pciesidvst sttpewpsfe pctasithvi saeeqirinm vqwqlnvfda
      421 ckqflsttag sdsdeddnef deddlmdddg sndsnefnff lrlftennel rsyyethcrd
      481 gdfwclvcrg igkkdwrifk dcvgliqhst aisktkrkqa hrafgqvick vlnwdvdhlp
      541 simlknkpys hsinhaltdk sksesgsked vdahqnnill mnsentlnee pdkdanlenr
      601 alniganedk penpmkssge nntkseadq
//
LOCUS       XP_040942796             486 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein non-catalytic subunit isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942796
VERSION     XP_040942796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086862.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..486
                     /product="rab3 GTPase-activating protein non-catalytic
                     subunit isoform X1"
                     /calculated_mol_wt=54293
     Region          39..449
                     /region_name="RAB3GAP2_N"
                     /note="Rab3 GTPase-activating protein regulatory subunit
                     N-terminus; pfam14655"
                     /db_xref="CDD:464240"
     CDS             1..486
                     /gene="LOC107943064"
                     /coded_by="XM_041086862.1:55..1515"
                     /db_xref="GeneID:107943064"
ORIGIN      
        1 mskrshhhlt elgciacedl tefgagkegw lapdagttvl caldahslai anrsvvliig
       61 wsdsdeprvk irpelspiea eritaiewlv fddikviaig tsrgfllmys lrgdlihrqm
      121 vyhgqiiklr vrgtkkdlmq dissedvcvv mpgviarfdg sdirsmlqrw fqethsrfwd
      181 eksnkdledd gnsdnrlpyq iwnvnkygsc vdaaitgimp pplmelqssq ryycavtigd
      241 davisafrls edrkrslvgv ilskvmpvtf stiasfskmi wrseptptsk peeklqsfar
      301 assltclkdy prkgekltls psgtlaaitd slgrillldt ralvvvriwk vssafiilns
      361 weptapfsgl ssifhalfqg yrdancffme mlvnrddkra sssyhvpgks dyclclaiha
      421 prkgiievwq mrtgprvlai qcakgcrllq ptyrfgslsd spyvplevfl lngdsgqlsv
      481 lnrfln
//
LOCUS       XP_016732282             457 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein non-catalytic subunit isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016732282
VERSION     XP_016732282.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876793.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732282.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..457
                     /product="rab3 GTPase-activating protein non-catalytic
                     subunit isoform X2"
                     /calculated_mol_wt=51143
     Region          39..420
                     /region_name="RAB3GAP2_N"
                     /note="Rab3 GTPase-activating protein regulatory subunit
                     N-terminus; pfam14655"
                     /db_xref="CDD:464240"
     CDS             1..457
                     /gene="LOC107943064"
                     /coded_by="XM_016876793.2:50..1423"
                     /db_xref="GeneID:107943064"
ORIGIN      
        1 mskrshhhlt elgciacedl tefgagkegw lapdagttvl caldahslai anrsvvliig
       61 wsdsdeprvk irpelspiea eritaiewlv fddikviaig tsrgfllmys lrgdlihrqm
      121 vyhgqiiklr vrgtkkdlmq dissedvcvv mpgviarfdg sdirsmlqrw fqethsrfwd
      181 eksnkdledd gnsdnrlpyq iwnvnkygsc vdaaitgimp pplmelqssq ryycavtigd
      241 davisafrls edrkrslvgv ilskvmpvtf stiasfskmi wrseptptsk peeklqsfar
      301 assltclkdy prkgekltls psgtlaaitd slgrillldt ralvvvriwk gyrdancffm
      361 emlvnrddkr asssyhvpgk sdyclclaih aprkgiievw qmrtgprvla iqcakgcrll
      421 qptyrfgsls dspyvplevf llngdsgqls vlnrfln
//
LOCUS       XP_040942797             402 aa            linear   PLN 06-AUG-2024
DEFINITION  rab3 GTPase-activating protein non-catalytic subunit isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040942797
VERSION     XP_040942797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086863.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..402
                     /product="rab3 GTPase-activating protein non-catalytic
                     subunit isoform X3"
                     /calculated_mol_wt=44948
     Region          39..401
                     /region_name="RAB3GAP2_N"
                     /note="Rab3 GTPase-activating protein regulatory subunit
                     N-terminus; pfam14655"
                     /db_xref="CDD:464240"
     CDS             1..402
                     /gene="LOC107943064"
                     /coded_by="XM_041086863.1:52..1260"
                     /db_xref="GeneID:107943064"
ORIGIN      
        1 mskrshhhlt elgciacedl tefgagkegw lapdagttvl caldahslai anrsvvliig
       61 wsdsdeprvk irpelspiea eritaiewlv fddikviaig tsrgfllmys lrgdlihrqm
      121 vyhgqiiklr vrgtkkdlmq dissedvcvv mpgviarfdg sdirsmlqrw fqethsrfwd
      181 eksnkdledd gnsdnrlpyq iwnvnkygsc vdaaitgimp pplmelqssq ryycavtigd
      241 davisafrls edrkrslvgv ilskvmpvtf stiasfskmi wrseptptsk peeklqsfar
      301 assltclkdy prkgekltls psgtlaaitd slgrillldt ralvvvriwk gyrdancffm
      361 emlvnrddkr asssyhvpgk sdyclclaih aprkgiievw ga
//
LOCUS       XP_016732274             379 aa            linear   PLN 06-AUG-2024
DEFINITION  polynucleotide 3'-phosphatase ZDP [Gossypium hirsutum].
ACCESSION   XP_016732274
VERSION     XP_016732274.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876785.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..379
                     /product="polynucleotide 3'-phosphatase ZDP"
                     /calculated_mol_wt=42849
     Region          55..126
                     /region_name="zf-PARP"
                     /note="Poly(ADP-ribose) polymerase and DNA-Ligase
                     Zn-finger region; pfam00645"
                     /db_xref="CDD:459887"
     Region          215..377
                     /region_name="HAD_PNP"
                     /note="polynucleotide 3'-phosphatase domain similar to the
                     phosphatase domain of the bifunctional enzyme
                     polynucleotide 5'-kinase/3'-phosphatase; cd01625"
                     /db_xref="CDD:319766"
     Site            order(220..224,263..267,317..318,346..347,355,358..359)
                     /site_type="active"
                     /db_xref="CDD:319766"
     CDS             1..379
                     /gene="LOC107943057"
                     /coded_by="XM_016876785.2:276..1415"
                     /db_xref="GeneID:107943057"
ORIGIN      
        1 mlkvsfilti pnkpkiphlf chfskpespk spnlfshfsf hfwekrnmst kivaeyaksg
       61 rssckkcgkt itaqvlrlgl vtrdargfdm tkwhhlncfh ekidsldvik gfdslkgvdq
      121 ealkkladgs ikspkqlrgk ddeeereqde eieseksntk kiklsapdek aqldvafsvs
      181 dikdkykdaa lepkwkafqt iiflerddgl hdsgkiaafd fdgclaktsl krvgadawsl
      241 mypsipeklq slyeegfklv iftnesnidr wknkrqvavd skigritnfi nkvkvpmqvf
      301 iacgisssgg kavdpfrkpk pgmwhimekh fnsgipidmd qsfyvgdaag rpndhsdadi
      361 kfaqavglkf yvpedyfrs
//
LOCUS       XP_040942798             458 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Gossypium hirsutum].
ACCESSION   XP_040942798
VERSION     XP_040942798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086864.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..458
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At3g47570"
                     /calculated_mol_wt=51353
     Region          47..>453
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          176..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          200..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          224..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          364..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          388..411
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..434
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          435..455
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..458
                     /gene="LOC107943059"
                     /coded_by="XM_041086864.1:214..1590"
                     /db_xref="GeneID:107943059"
ORIGIN      
        1 manvprfilg ltmpvllpnf vvsfstktki dtstdqsalq alkahvvsdp qkiletnwsi
       61 ttsvcnwagv tcgsqhqrvi alnlsnmllt gtlppqignl sfltslnlmn nsfhgslpiq
      121 lanlhrlrfi elgenyfyee ipswfgsfpe lqylslsank ftgqipsdmf erlpklqsln
      181 lgmnnlsgki pidllkckel qfinlesnrl egilpeeign ltklrslhld nnriqgeigd
      241 llnleqltms nngllrhppp mynltrlril dlsrnhlsgp ipfdfpslln leqlnisfnm
      301 fggsipstis nltrltildt ftnylsgeip sdmferlskl qvldlvsawi ptsipmslfk
      361 ckelqimnlv dcgfegilpk eignltmlrs ldltyneieg viphqigdll nleqlsissn
      421 rlkglfpsis nltrlrildl synflagtih nffthifl
//
LOCUS       XP_040942799            1000 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942799
VERSION     XP_040942799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086865.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1000
                     /product="receptor-like protein 6 isoform X1"
                     /calculated_mol_wt=111368
     Region          41..88
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <82..178
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          96..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          120..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..>912
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..338
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..434
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          487..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <498..620
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          509..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..554
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          555..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..724
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          725..743
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..827
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          828..851
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          852..875
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1000
                     /gene="LOC107944931"
                     /coded_by="XM_041086865.1:83..3085"
                     /db_xref="GeneID:107944931"
ORIGIN      
        1 mgkfiwlcqi rslllvlffl svvdsflsls ssslnpiplc lpedtsaliq fnntlfides
       61 andlcaypkt kswnestncc twegvtcnkv tgkvisldls csmlagslsp ntslfrlqgl
      121 krldlsfnnf sgsipsgfsq lvsltyldls gcsfsglvps disllsklis lnlstndlkf
      181 drqsfdmltr nltklenlvl elinmsdfvp tsfmnlpssl khlglrfcnl kgkfpteifq
      241 fryleyvdls fnsltgylps snwsshlkyi dlndnqfrgs ipasignltk ttfldlsnne
      301 fqgqlpsslf slkqltdlvl sdnslegflp thvrgfqdlk vlclsnnllt gaipswpftl
      361 pslekldlsg nrlsgpinqi qkpnsvqkvd lgyneihgei pssffdlvnl teldlssnnf
      421 kgvinsvmfs klenlltldl ssnsfsgvik ldvlsklkkl gelnlsnntl lswssdsgsn
      481 ttfqeldtly fsscnvrqfp nflrsakklr ildlsnnsiq gsifkweseg weqlivlnls
      541 ynsltglehf pgknlkfldl rsnllhnlpp tplppslqgf wisnnnltgk ippsictlts
      601 ldvldmsrny lggvipaclg nfsheilnin lqmnkfrgki pdfcvddnal vnlalndnql
      661 egllprslsn ctslkflnla nnklsdtfph wlgvlpdlqv lilrlnnfqg plsisndtkp
      721 sfsslqiadl sqnkftgllp ttffqnldal khaiskhksm fqeawenlgl sqhlaldyyg
      781 qisldvttkg sdieleykrs lpifsgidfs snkfygkipd vigelhaihm lnlshnnfig
      841 hippslgklv elesldlssn klsgripsql tnltflavln fsdnnlvgpi phgnqfdtfe
      901 ndsyhgnlgl cgfpltkqcd ngdepkphas kfkedegspi sflwqlvmmg ygcgavlgls
      961 tgyivfttgr pwwfvrmver dwkpnvtrwv ckirgkrnih
//
LOCUS       XP_040942800             962 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942800
VERSION     XP_040942800.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086866.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..962
                     /product="receptor-like protein 6 isoform X2"
                     /calculated_mol_wt=107339
     Region          41..88
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          72..>689
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          96..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          120..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..338
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          386..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..434
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          435..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          487..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          509..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..554
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          555..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..724
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          725..743
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <807..950
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     CDS             1..962
                     /gene="LOC107944931"
                     /coded_by="XM_041086866.1:83..2971"
                     /db_xref="GeneID:107944931"
ORIGIN      
        1 mgkfiwlcqi rslllvlffl svvdsflsls ssslnpiplc lpedtsaliq fnntlfides
       61 andlcaypkt kswnestncc twegvtcnkv tgkvisldls csmlagslsp ntslfrlqgl
      121 krldlsfnnf sgsipsgfsq lvsltyldls gcsfsglvps disllsklis lnlstndlkf
      181 drqsfdmltr nltklenlvl elinmsdfvp tsfmnlpssl khlglrfcnl kgkfpteifq
      241 fryleyvdls fnsltgylps snwsshlkyi dlndnqfrgs ipasignltk ttfldlsnne
      301 fqgqlpsslf slkqltdlvl sdnslegflp thvrgfqdlk vlclsnnllt gaipswpftl
      361 pslekldlsg nrlsgpinqi qkpnsvqkvd lgyneihgei pssffdlvnl teldlssnnf
      421 kgvinsvmfs klenlltldl ssnsfsgvik ldvlsklkkl gelnlsnntl lswssdsgsn
      481 ttfqeldtly fsscnvrqfp nflrsakklr ildlsnnsiq gsifkweseg weqlivlnls
      541 ynsltglehf pgknlkfldl rsnllhnlpp tplppslqgf wisnnnltgk ippsictlts
      601 ldvldmsrny lggvipaclg nfsheilnin lqmnkfrgki pdfcvddnal vnlalndnql
      661 egllprslsn ctslkflnla nnklsdtfph wlgvlpdlqv lilrlnnfqg plsisndtkp
      721 sfsslqiadl sqnkftgllp ttffqnldal khaiskhksm fqeawenlgl sqhlaldyyg
      781 qisldvttkg sdieleykrs lpifsgidfs snkfygkipd vigelhaihm lnlshnnfiv
      841 lnfsdnnlvg piphgnqfdt fendsyhgnl glcgfpltkq cdngdepkph askfkedegs
      901 pisflwqlvm mgygcgavlg lstgyivftt grpwwfvrmv erdwkpnvtr wvckirgkrn
      961 ih
//
LOCUS       XP_040942801             943 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase FLS2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942801
VERSION     XP_040942801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086867.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..943
                     /product="LRR receptor-like serine/threonine-protein
                     kinase FLS2 isoform X1"
                     /calculated_mol_wt=104900
     Region          12..>545
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          313..>862
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          318..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..416
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          489..512
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          513..534
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          537..567
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          568..593
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          594..614
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          620..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          644..667
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          668..693
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          694..718
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          757..777
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          778..801
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          802..825
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..943
                     /gene="LOC107902726"
                     /coded_by="XM_041086867.1:176..3007"
                     /db_xref="GeneID:107902726"
ORIGIN      
        1 mgnvtrfila lmmvmllphf vvsfsikttt nintdqsall alkayivsdp qkmlktnwst
       61 atsvcnwigv tcgsrhqrvi alnlssmllt gtipsqignl sfltsldlmn nsfygslpdq
      121 ftnlhrlkhi dlswnnfcge ipysfpklqy lslrnnifag eirsdmfehl prlqvlsltl
      181 nklsseipmg lfkckelqvi dfgynrmmgg ilpkeignlt mlrilrlggn mfegvipyqi
      241 gdllnleels lcntllkghi ppsisnltrl tildlstnsl tgviphqign llnleelily
      301 snmlkgplps fisnltrltt fdlshnslsg qipsglferl pklqrldlgg nklsgkiplg
      361 lfnckelqsl ildsnrleei lpkeignltm smlealdlhn nllkgiipyq isnltrlkfl
      421 ylsnnfltgi ipyqignltr lrfldlsnns ltgviphqig nllnleqlsi psnmlegplp
      481 ssigniirlt glqlfnnslt gviphqignl tclqlldlss nsltghipit lgnlrylhll
      541 disdndlsst lssskssfls slancrdlsy lsfarnplis gylpafigns siplqyfdas
      601 scnisgripg eignwnptnl gylclngnql egilplslin cselvvlnva nnnlsdtfph
      661 wlgmlprlrv lilrsnrfhg siqdsltnfs fsklqmvdls hndftgllpt effqnlkalk
      721 eevgydseyf sysvnltikg leleftktvh mpiftcidls dngfhgeipk vvgelrllla
      781 lnlshnsltg pippsfgnla alesldlsfn klsgripsql tnltflevlr fwnnnlvgpi
      841 pqgkqfntfe ndsyrgnlgl cgfplskecr ndersqqaqd eedngngiaf iwkvammgyg
      901 cgmvlgisia yivfttgrpw wlvrmierdl qnkvsswfgk kre
//
LOCUS       XP_040942802             919 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942802
VERSION     XP_040942802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086868.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..919
                     /product="receptor-like protein 9DC3 isoform X2"
                     /calculated_mol_wt=102089
     Region          12..>686
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..416
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          489..510
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          513..595
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          544..569
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          596..617
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          620..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          644..664
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          670..694
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <716..845
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          733..753
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          754..777
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          778..801
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..919
                     /gene="LOC107902726"
                     /coded_by="XM_041086868.1:175..2934"
                     /db_xref="GeneID:107902726"
ORIGIN      
        1 mgnvtrfila lmmvmllphf vvsfsikttt nintdqsall alkayivsdp qkmlktnwst
       61 atsvcnwigv tcgsrhqrvi alnlssmllt gtipsqignl sfltsldlmn nsfygslpdq
      121 ftnlhrlkhi dlswnnfcge ipysfpklqy lslrnnifag eirsdmfehl prlqvlsltl
      181 nklsseipmg lfkckelqvi dfgynrmmgg ilpkeignlt mlrilrlggn mfegvipyqi
      241 gdllnleels lcntllkghi ppsisnltrl tildlstnsl tgviphqign llnleelily
      301 snmlkgplps fisnltrltt fdlshnslsg qipsglferl pklqrldlgg nklsgkiplg
      361 lfnckelqsl ildsnrleei lpkeignltm smlealdlhn nllkgiipyq ignltrlrfl
      421 dlsnnsltgv iphqignlln leqlsipsnm legplpssig niirltglql fnnsltgvip
      481 hqignltclq lldlssnslt ghipitlgnl rylhlldisd ndlsstlsss kssflsslan
      541 crdlsylsfa rnplisgylp afignssipl qyfdasscni sgripgeign wnptnlgylc
      601 lngnqlegil plslincsel vvlnvannnl sdtfphwlgm lprlrvlilr snrfhgsiqd
      661 sltnfsfskl qmvdlshndf tgllpteffq nlkalkeevg ydseyfsysv nltikglele
      721 ftktvhmpif tcidlsdngf hgeipkvvge lrlllalnls hnsltgpipp sfgnlaales
      781 ldlsfnklsg ripsqltnlt flevlrfwnn nlvgpipqgk qfntfendsy rgnlglcgfp
      841 lskecrnder sqqaqdeedn gngiafiwkv ammgygcgmv lgisiayivf ttgrpwwlvr
      901 mierdlqnkv sswfgkkre
//
LOCUS       XP_040942803             725 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_040942803
VERSION     XP_040942803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086869.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..725
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=80135
     Region          11..>618
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          79..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..398
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..473
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          474..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          510..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..557
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          558..581
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..725
                     /gene="LOC121213782"
                     /coded_by="XM_041086869.1:1383..3560"
                     /db_xref="GeneID:121213782"
ORIGIN      
        1 mgntglimal mmavlllhfv vsfstkttdi ntdrstllal kahvsdprnf lttnwsvdis
       61 icnwvgvtce srnqrviald lfnmslsgti ppdmgnlsfl trlnigynnf hdllpvqltn
      121 lyrlrfisms dnnfhgeiss wvgyfpelqy lslsnnsftg pipsdmcdrl ptlkelylsn
      181 nklsgkipig lfkckglqni slafnslegi lpeeignltt lrtldlrdnq iqgvipqqis
      241 nltglkvlyl shnfltghip vtlgnlrdle lldlsdndls gtlsssersf lsslancsgl
      301 ttlafesnpl isgylppsia nlsvslqyfd asscsisgsi pgeignwnva tyldfsgnhf
      361 sgaisdrvck rnndlrylav ndnqlegtlp lsltncselv flnvadnnls dtfphwlgil
      421 pqlrvlilrs nrfhgsiqsy iatssfsklq iidlshndft gllptnffqn lkalkeaeyv
      481 dngnwyslvv nltikglele ftlkvrmpll tcidlsmngf hgeipkvvge lrllqalnls
      541 hnsltgpipp sfgnlaales ldlsfnklsg ripsqltnlt flqvlrfwnn nlvgpiphgk
      601 qfdtfendsy rgnlglcgfp lskecnndei aepaqdeedn gngngngngn giafiwkvam
      661 mgygsgmvlg isigyivftt grprwlvrki erdlqnkvss wfgkkrmspr kdevpqlvqe
      721 qgvcm
//
LOCUS       XP_040942804             725 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_040942804
VERSION     XP_040942804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086870.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..725
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=80135
     Region          11..>618
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          79..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..398
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..473
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          474..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          510..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..557
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          558..581
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..725
                     /gene="LOC121213782"
                     /coded_by="XM_041086870.1:1386..3563"
                     /db_xref="GeneID:121213782"
ORIGIN      
        1 mgntglimal mmavlllhfv vsfstkttdi ntdrstllal kahvsdprnf lttnwsvdis
       61 icnwvgvtce srnqrviald lfnmslsgti ppdmgnlsfl trlnigynnf hdllpvqltn
      121 lyrlrfisms dnnfhgeiss wvgyfpelqy lslsnnsftg pipsdmcdrl ptlkelylsn
      181 nklsgkipig lfkckglqni slafnslegi lpeeignltt lrtldlrdnq iqgvipqqis
      241 nltglkvlyl shnfltghip vtlgnlrdle lldlsdndls gtlsssersf lsslancsgl
      301 ttlafesnpl isgylppsia nlsvslqyfd asscsisgsi pgeignwnva tyldfsgnhf
      361 sgaisdrvck rnndlrylav ndnqlegtlp lsltncselv flnvadnnls dtfphwlgil
      421 pqlrvlilrs nrfhgsiqsy iatssfsklq iidlshndft gllptnffqn lkalkeaeyv
      481 dngnwyslvv nltikglele ftlkvrmpll tcidlsmngf hgeipkvvge lrllqalnls
      541 hnsltgpipp sfgnlaales ldlsfnklsg ripsqltnlt flqvlrfwnn nlvgpiphgk
      601 qfdtfendsy rgnlglcgfp lskecnndei aepaqdeedn gngngngngn giafiwkvam
      661 mgygsgmvlg isigyivftt grprwlvrki erdlqnkvss wfgkkrmspr kdevpqlvqe
      721 qgvcm
//
LOCUS       XP_040942805             943 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase FLS2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942805
VERSION     XP_040942805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086871.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..943
                     /product="LRR receptor-like serine/threonine-protein
                     kinase FLS2 isoform X1"
                     /calculated_mol_wt=104901
     Region          12..>545
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          313..>862
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          318..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..392
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..416
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          489..512
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          513..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          537..567
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          568..593
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          594..614
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          620..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          644..667
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          668..693
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          694..718
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          757..777
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          778..801
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          802..825
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..943
                     /gene="LOC107917201"
                     /coded_by="XM_041086871.1:185..3016"
                     /db_xref="GeneID:107917201"
ORIGIN      
        1 mgnvtrfila lmmvmllphf vvsfsikttt nintdqsall alkayivsdp qkmlktnwst
       61 atsvcnwigv tcgsrhqrvi alnlssmllt gtipsqignl sfltsldlmn nsfygslpdq
      121 ftnlhrlkhi dlswnnfcge ipysfpklqy lslrnnifag eirsdmfehl prlqvlsltl
      181 nklsseipmg lfkckelqvi dfgynrmmgg ilpkeignlt mlrilrlggn mfegvipyqi
      241 gdllnleels lcntllkghi ppsisnltrl kildlstnsl tgviphqign llnleelily
      301 snmlkgplps fisnltrltt fdlshnslsg qipsglferl pklqrldlgg nklsgkiplg
      361 lfnckelqsl ildsnrleei lpkeignltm smlealdlhn nllkgiipyq isnltrlefl
      421 dlsnnfltgi ipyqignltr lrfldlsnns ltgviphqig nllnleqlsi psnmlegplp
      481 ssigniirlt slqlfnnslt gviphqignl tclqlldlss nsltgqipit lgnlrylhll
      541 disdndlsst lssskssfqs slancrelsy lsfarnplis gylpafigns siplqyfdas
      601 scnisgripg eignwnptnl rylglngnql egilplslvn cselvvlnva nnnfsdtfph
      661 wlgmlprlrv lilrsnrfhg siqdsltnfs fsklqmvdls hndftgllpt gffqnlkalk
      721 eevgydseyf sysvnltikg leleftktvh mpiftcidls dngfhgeipk vvgelrllla
      781 lnlshnsltg pippsfgnla alesldlsfn klsgripsql tnltflevlr fwnnnlvgpi
      841 pqgkqfntfe ndsyrgnlgl cgfplskecr ndersqqaqd eedngngiaf iwkvammgyg
      901 cgmvlgisia yivfatgrpw wlvrmierdl qnkvsswfgk kre
//
LOCUS       XP_040942806             919 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942806
VERSION     XP_040942806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086872.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..919
                     /product="receptor-like protein 9DC3 isoform X2"
                     /calculated_mol_wt=102137
     Region          12..>694
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..416
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          489..510
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          544..569
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          596..617
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          620..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          644..664
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          670..694
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <716..845
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          733..753
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          754..777
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          778..801
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..919
                     /gene="LOC107917201"
                     /coded_by="XM_041086872.1:186..2945"
                     /db_xref="GeneID:107917201"
ORIGIN      
        1 mgnvtrfila lmmvmllphf vvsfsikttt nintdqsall alkayivsdp qkmlktnwst
       61 atsvcnwigv tcgsrhqrvi alnlssmllt gtipsqignl sfltsldlmn nsfygslpdq
      121 ftnlhrlkhi dlswnnfcge ipysfpklqy lslrnnifag eirsdmfehl prlqvlsltl
      181 nklsseipmg lfkckelqvi dfgynrmmgg ilpkeignlt mlrilrlggn mfegvipyqi
      241 gdllnleels lcntllkghi ppsisnltrl kildlstnsl tgviphqign llnleelily
      301 snmlkgplps fisnltrltt fdlshnslsg qipsglferl pklqrldlgg nklsgkiplg
      361 lfnckelqsl ildsnrleei lpkeignltm smlealdlhn nllkgiipyq ignltrlrfl
      421 dlsnnsltgv iphqignlln leqlsipsnm legplpssig niirltslql fnnsltgvip
      481 hqignltclq lldlssnslt gqipitlgnl rylhlldisd ndlsstlsss kssfqsslan
      541 crelsylsfa rnplisgylp afignssipl qyfdasscni sgripgeign wnptnlrylg
      601 lngnqlegil plslvncsel vvlnvannnf sdtfphwlgm lprlrvlilr snrfhgsiqd
      661 sltnfsfskl qmvdlshndf tgllptgffq nlkalkeevg ydseyfsysv nltikglele
      721 ftktvhmpif tcidlsdngf hgeipkvvge lrlllalnls hnsltgpipp sfgnlaales
      781 ldlsfnklsg ripsqltnlt flevlrfwnn nlvgpipqgk qfntfendsy rgnlglcgfp
      841 lskecrnder sqqaqdeedn gngiafiwkv ammgygcgmv lgisiayivf atgrpwwlvr
      901 mierdlqnkv sswfgkkre
//
LOCUS       XP_016701698             898 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016701698
VERSION     XP_016701698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..898
                     /product="receptor-like protein 6 isoform X1"
                     /calculated_mol_wt=99940
     Region          <11..>206
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          18..41
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          42..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..>810
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          237..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          284..307
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          308..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <336..421
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          358..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          385..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <396..518
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          453..498
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          499..522
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          524..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          548..571
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          572..595
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          596..623
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          648..725
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          726..749
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..773
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..898
                     /gene="LOC107916840"
                     /coded_by="XM_016846209.2:401..3097"
                     /db_xref="GeneID:107916840"
ORIGIN      
        1 mlagslspnt slfrlqglkr ldlsfnnfsg sipsgfsqlv sltyldlsgc sfsglvpsni
       61 sllsklisln lssnglkfgs qsfdmltrnl sklenlvldl vnmsdvvpts fmnlpsslkq
      121 lglkfcnlkg kfpteifqfr yleyvdlsln sltgclpssn wsshlkyidl ydnqfrgsip
      181 asignltkit fldlsnnefq gqlpsslfsl kqltdlvlsn nslegflpth vrgfqdlkvl
      241 clsnnlltga ipswpftlps leeldlsgnr lsgpinqiqk pnsvqkvdlg yneihgeips
      301 sffdlvnlte ldlssnnfng vinsvmfskl enlltldlss nsfsgvikld vlsklkelte
      361 lnlsnntlls wssdsgsntt fqeldtlyfs scnvrqfpnf lrsaknlril dlsnnsiqgs
      421 vfkwesegwe qlivlnlsyn sltglehfpg knlkfldlrs nllhnlpltp lppslqgfwi
      481 snnnltgkip psicnltsld vldmsrnylg gvipaclgnf sheisninlq mnkfrgkipd
      541 fcvddnalvn lalndnqleg llprslsnct slkflnlann klsdsfphwl rvlpdlqvli
      601 lrfnnfqgpl sisndtkpsf sslqiadlsq nkftgllpta ffqnldalkh aisrhksmfq
      661 eawenlglyq hlaldyygqi slnvtmkgsd ikleykrslp ifsgidfssn kfygkipdvi
      721 gelhaihmln lshnnfighi ppslgnlvel esldlssnkl sgripsqltn ltflavlnfs
      781 dnnlvgpiph gnqfdtfend syhgnlglcg fpltkqcdng depkppaskf kedegspisf
      841 lwqlvmmgyg cgavlglstg yimfttgrpw wfvrmverdw kpnvtrwvck irgkrnih
//
LOCUS       XP_040942807             860 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942807
VERSION     XP_040942807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086873.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..860
                     /product="receptor-like protein 6 isoform X2"
                     /calculated_mol_wt=95925
     Region          2..>587
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          18..41
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          42..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          237..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          284..307
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          308..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          385..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          453..498
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          499..522
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          524..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          548..571
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <551..640
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          572..595
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          596..623
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <683..779
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     CDS             1..860
                     /gene="LOC107916840"
                     /coded_by="XM_041086873.1:401..2983"
                     /db_xref="GeneID:107916840"
ORIGIN      
        1 mlagslspnt slfrlqglkr ldlsfnnfsg sipsgfsqlv sltyldlsgc sfsglvpsni
       61 sllsklisln lssnglkfgs qsfdmltrnl sklenlvldl vnmsdvvpts fmnlpsslkq
      121 lglkfcnlkg kfpteifqfr yleyvdlsln sltgclpssn wsshlkyidl ydnqfrgsip
      181 asignltkit fldlsnnefq gqlpsslfsl kqltdlvlsn nslegflpth vrgfqdlkvl
      241 clsnnlltga ipswpftlps leeldlsgnr lsgpinqiqk pnsvqkvdlg yneihgeips
      301 sffdlvnlte ldlssnnfng vinsvmfskl enlltldlss nsfsgvikld vlsklkelte
      361 lnlsnntlls wssdsgsntt fqeldtlyfs scnvrqfpnf lrsaknlril dlsnnsiqgs
      421 vfkwesegwe qlivlnlsyn sltglehfpg knlkfldlrs nllhnlpltp lppslqgfwi
      481 snnnltgkip psicnltsld vldmsrnylg gvipaclgnf sheisninlq mnkfrgkipd
      541 fcvddnalvn lalndnqleg llprslsnct slkflnlann klsdsfphwl rvlpdlqvli
      601 lrfnnfqgpl sisndtkpsf sslqiadlsq nkftgllpta ffqnldalkh aisrhksmfq
      661 eawenlglyq hlaldyygqi slnvtmkgsd ikleykrslp ifsgidfssn kfygkipdvi
      721 gelhaihmln lshnnfivln fsdnnlvgpi phgnqfdtfe ndsyhgnlgl cgfpltkqcd
      781 ngdepkppas kfkedegspi sflwqlvmmg ygcgavlgls tgyimfttgr pwwfvrmver
      841 dwkpnvtrwv ckirgkrnih
//
LOCUS       XP_016701699             723 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 9DC3 [Gossypium hirsutum].
ACCESSION   XP_016701699
VERSION     XP_016701699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..723
                     /product="receptor-like protein 9DC3"
                     /calculated_mol_wt=79843
     Region          11..>618
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          79..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          474..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          510..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..557
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          558..581
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..723
                     /gene="LOC107916841"
                     /coded_by="XM_016846210.2:320..2491"
                     /db_xref="GeneID:107916841"
ORIGIN      
        1 mgntglimal mmavlllhfv vsfstkttdi ntdrstllal kahvsdprnf lttnwsvdis
       61 icnwvgvtce srnqrviald lfnmslsgti ppdmgnlsfl trlnigynnf hdllpvqltn
      121 lyrlkfisms dnnfhgeiss wvgyfpelqy lslsnnsftg pipsdmcdrl ptlkelylsd
      181 nklsgkipig lfkckglqni slafnslegi lpeeignltt lrtldlrgnq iqgvipqqis
      241 nltglkvlyl shnfltghip vtlgnlrdle lldlsdndls gtlsssersf lsslancsgl
      301 ttlafgsnpl isgylppsia nlsvslqyfd asscsisgsi pgeignwnva tyldfsgnhf
      361 sgaisdrvck rnndlrylav ndnqlegtlp lsltncseiv flnvadnnls dtfphwlgil
      421 pqlrvlilrs nrfhgsiqsy iatssfsklq iidlshndft gllptnffqn lmamkeaeyv
      481 dngnwyslvv nltikglele ftlkvrmpll tcidlsmngf hgeipkvvge lrllqalnls
      541 hnsltgpipp sfgtlaales idlsfnrlsg ripsqltnlt flqvlrfwnn nlvgpiphgk
      601 qfdtfendsy rgnlglcgfp lskecnndei aepaqdeedn gngngngngi afiwkvammg
      661 ygsgmvlgis igyivfttgr prwlvrkier dlqnkvsswf gkkrmsprkd evpqlvqeqg
      721 vcm
//
LOCUS       XP_016701958             869 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 35 [Gossypium hirsutum].
ACCESSION   XP_016701958
VERSION     XP_016701958.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701958.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..869
                     /product="receptor-like protein 35"
                     /calculated_mol_wt=96790
     Region          92..>790
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          134..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          323..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          394..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..548
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          549..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          597..622
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          623..647
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          648..705
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          706..729
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          730..753
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..869
                     /gene="LOC107917085"
                     /coded_by="XM_016846469.2:19..2628"
                     /db_xref="GeneID:107917085"
ORIGIN      
        1 myndpillcf ynilqsfifl hantiktlec thsspsstiq rfpsdhkipl pqnfmgnarf
       61 ipaltvavll lnfvvsfstk ittnistdqs allalkahvi drqnllttnw ssafnickwi
      121 gvtcgsrhrr vialdlsnms lsgivpphig nlssltwlnm rnnnfhgslp vqlvnlhrlk
      181 yirlsfnsff geippwfgsf prlqylslsy nnfigeipld mfqglprlqv lylavnrlsg
      241 kipiglfeck elqdidladn slegilpkei gnltmlntlh lhnnmiegip eqigdllnle
      301 tlglssnqlk ghlpssignl tclrilklyn nsltgiiphq ignlvnleif nihsnmlkgh
      361 lpsfnnltrl rtlrlfnnsl tgdipitlgn lrdlqvldis dndlsgtlss skisflssla
      421 nctdlsflsl grnpsisgyl pssmgndllv slqyfyawsc nisgnipgei gnltdlvvld
      481 lsdnnlvgsi pttltrlkhi qwldlssnfl sgplqieign wnvveyvdfs gnhfsgaipd
      541 kvcdrnndlr ylafsgnlla gilprslinc gelvvfnvvd nklsdtfphw lgmlpklrvl
      601 ilrsnrfhgs iqssiptsff sklqiidlsh nhftgllptq ffqnlkalkk veyrngsywy
      661 nvnvtvkgle lefpitvrkp ifttidlsmn gfhgeipevv gelsllqaln lshnnligpi
      721 ppsfgnlvav esldlsfnkl tgkipsqltn ltflavlkfq nnnlvgpiph gkqfdtfdnd
      781 syrgnwglcg fplskqcsnd erlakdeegn gngiafiwkv avmgygcgmv lgismayivf
      841 ttgkpqwlvr miekdlqnkv sswfqkkrn
//
LOCUS       XP_016701959             869 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 35 [Gossypium hirsutum].
ACCESSION   XP_016701959
VERSION     XP_016701959.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701959.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..869
                     /product="receptor-like protein 35"
                     /calculated_mol_wt=96790
     Region          92..>790
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          134..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          323..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          394..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..548
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          549..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          597..622
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          623..647
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          648..705
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          706..729
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          730..753
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..869
                     /gene="LOC107917085"
                     /coded_by="XM_016846470.2:19..2628"
                     /db_xref="GeneID:107917085"
ORIGIN      
        1 myndpillcf ynilqsfifl hantiktlec thsspsstiq rfpsdhkipl pqnfmgnarf
       61 ipaltvavll lnfvvsfstk ittnistdqs allalkahvi drqnllttnw ssafnickwi
      121 gvtcgsrhrr vialdlsnms lsgivpphig nlssltwlnm rnnnfhgslp vqlvnlhrlk
      181 yirlsfnsff geippwfgsf prlqylslsy nnfigeipld mfqglprlqv lylavnrlsg
      241 kipiglfeck elqdidladn slegilpkei gnltmlntlh lhnnmiegip eqigdllnle
      301 tlglssnqlk ghlpssignl tclrilklyn nsltgiiphq ignlvnleif nihsnmlkgh
      361 lpsfnnltrl rtlrlfnnsl tgdipitlgn lrdlqvldis dndlsgtlss skisflssla
      421 nctdlsflsl grnpsisgyl pssmgndllv slqyfyawsc nisgnipgei gnltdlvvld
      481 lsdnnlvgsi pttltrlkhi qwldlssnfl sgplqieign wnvveyvdfs gnhfsgaipd
      541 kvcdrnndlr ylafsgnlla gilprslinc gelvvfnvvd nklsdtfphw lgmlpklrvl
      601 ilrsnrfhgs iqssiptsff sklqiidlsh nhftgllptq ffqnlkalkk veyrngsywy
      661 nvnvtvkgle lefpitvrkp ifttidlsmn gfhgeipevv gelsllqaln lshnnligpi
      721 ppsfgnlvav esldlsfnkl tgkipsqltn ltflavlkfq nnnlvgpiph gkqfdtfdnd
      781 syrgnwglcg fplskqcsnd erlakdeegn gngiafiwkv avmgygcgmv lgismayivf
      841 ttgkpqwlvr miekdlqnkv sswfqkkrn
//
LOCUS       XP_016702644             620 aa            linear   PLN 06-AUG-2024
DEFINITION  peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
            [Gossypium hirsutum].
ACCESSION   XP_016702644
VERSION     XP_016702644.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847155.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702644.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..620
                     /product="peptide-N4-(N-acetyl-beta-
                     glucosaminyl)asparagine amidase A"
                     /calculated_mol_wt=69426
     Region          58..467
                     /region_name="PNGaseA"
                     /note="Peptide N-acetyl-beta-D-glucosaminyl asparaginase
                     amidase A; pfam12222"
                     /db_xref="CDD:403439"
     CDS             1..620
                     /gene="LOC107917818"
                     /coded_by="XM_016847155.2:315..2177"
                     /db_xref="GeneID:107917818"
ORIGIN      
        1 mastfspllf flpllfldpl fckanlhhsk tflrsslisq pltnatilpt lffevtkpin
       61 vptttpctls vlqhdfgfty gkppvlanys fpsdcpyqef skivlewnat ckgrqfdrif
      121 gvwlsgvell rsctaeprat giiwsvkkdi trysslllsn ktqtfaiymg nlvdktytgv
      181 yhvnvtlyfy paveklnlye ekarnlgsgf askadliipf srdlplndgl wyeienstdv
      241 ivkefeipqn vyravlevyv sfhendefwy gnlpneyiaa nnitgfagng pfrevvvsld
      301 devvgaiwpf tvvytgginp llwrpisgig sfdlptydie ispflgslld gkkhklsfgv
      361 tnalnvwyid anlhlwldsn saktegkllq hkvaplavss vldfkglngt fvtntsrfvs
      421 stgwvkstyg tvttesiqdl rysnsmlmgr dgnlqivnqt ihfedsvyak lpasnveskk
      481 slkrfhlyly tddvdqgngt lsmvvnvtlg fnekkfkdad arspssslrn lqkgkgvivi
      541 kdnlvvsgvg stqqsynyds skfcysrnis ssnytilhde vrntcnkrak shfgyglsrr
      601 wsfparrafl tshvvdpngn
//
LOCUS       XP_016703036             372 aa            linear   PLN 06-AUG-2024
DEFINITION  uroporphyrinogen decarboxylase 1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016703036
VERSION     XP_016703036.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703036.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="uroporphyrinogen decarboxylase 1, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=41285
     Region          19..362
                     /region_name="PLN02433"
                     /note="uroporphyrinogen decarboxylase"
                     /db_xref="CDD:215237"
     Site            order(36..41,46,50,56,83..89,101,106,153,163,169,216,
                     218..219,255,333)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238368"
     Site            order(37,41,87,163,218,333)
                     /site_type="active"
                     /db_xref="CDD:238368"
     CDS             1..372
                     /gene="LOC107918050"
                     /coded_by="XM_016847547.2:353..1471"
                     /db_xref="GeneID:107918050"
ORIGIN      
        1 mqstyafylh ssfllytllv kaargepvsr ppawmmrqag rymsvyrkla ekhpsfrers
       61 ettdliveis lqpweafrpd gviifsdilt plpafgvlfd ieevrgpviq spicsedclk
      121 alhpidlekl hfvgdslkil rqevgdhaav lgfvgapwti atyiveggtt rtyttvksmc
      181 htapnllral lshltkaise yiiyqvesga hciqifdswg gqlppdmweq wskpyiteiv
      241 smvqnkcpki plvlyingng gllermkgtg vdvigldwtv dmadgrkrlg ndicvqgivd
      301 paylfsplpa vteeiqrvlk cagpcghiln lghgvlvgtp eeavahffev tkslkyesss
      361 qnhameeskl lv
//
LOCUS       XP_016703039             372 aa            linear   PLN 06-AUG-2024
DEFINITION  uroporphyrinogen decarboxylase 1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016703039
VERSION     XP_016703039.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847550.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703039.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="uroporphyrinogen decarboxylase 1, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=41285
     Region          19..362
                     /region_name="PLN02433"
                     /note="uroporphyrinogen decarboxylase"
                     /db_xref="CDD:215237"
     Site            order(36..41,46,50,56,83..89,101,106,153,163,169,216,
                     218..219,255,333)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238368"
     Site            order(37,41,87,163,218,333)
                     /site_type="active"
                     /db_xref="CDD:238368"
     CDS             1..372
                     /gene="LOC107918050"
                     /coded_by="XM_016847550.2:353..1471"
                     /db_xref="GeneID:107918050"
ORIGIN      
        1 mqstyafylh ssfllytllv kaargepvsr ppawmmrqag rymsvyrkla ekhpsfrers
       61 ettdliveis lqpweafrpd gviifsdilt plpafgvlfd ieevrgpviq spicsedclk
      121 alhpidlekl hfvgdslkil rqevgdhaav lgfvgapwti atyiveggtt rtyttvksmc
      181 htapnllral lshltkaise yiiyqvesga hciqifdswg gqlppdmweq wskpyiteiv
      241 smvqnkcpki plvlyingng gllermkgtg vdvigldwtv dmadgrkrlg ndicvqgivd
      301 paylfsplpa vteeiqrvlk cagpcghiln lghgvlvgtp eeavahffev tkslkyesss
      361 qnhameeskl lv
//
LOCUS       XP_016703037             372 aa            linear   PLN 06-AUG-2024
DEFINITION  uroporphyrinogen decarboxylase 1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016703037
VERSION     XP_016703037.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703037.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="uroporphyrinogen decarboxylase 1, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=41285
     Region          19..362
                     /region_name="PLN02433"
                     /note="uroporphyrinogen decarboxylase"
                     /db_xref="CDD:215237"
     Site            order(36..41,46,50,56,83..89,101,106,153,163,169,216,
                     218..219,255,333)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238368"
     Site            order(37,41,87,163,218,333)
                     /site_type="active"
                     /db_xref="CDD:238368"
     CDS             1..372
                     /gene="LOC107918050"
                     /coded_by="XM_016847548.2:292..1410"
                     /db_xref="GeneID:107918050"
ORIGIN      
        1 mqstyafylh ssfllytllv kaargepvsr ppawmmrqag rymsvyrkla ekhpsfrers
       61 ettdliveis lqpweafrpd gviifsdilt plpafgvlfd ieevrgpviq spicsedclk
      121 alhpidlekl hfvgdslkil rqevgdhaav lgfvgapwti atyiveggtt rtyttvksmc
      181 htapnllral lshltkaise yiiyqvesga hciqifdswg gqlppdmweq wskpyiteiv
      241 smvqnkcpki plvlyingng gllermkgtg vdvigldwtv dmadgrkrlg ndicvqgivd
      301 paylfsplpa vteeiqrvlk cagpcghiln lghgvlvgtp eeavahffev tkslkyesss
      361 qnhameeskl lv
//
LOCUS       XP_040942808             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uroporphyrinogen decarboxylase 1, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942808
VERSION     XP_040942808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086874.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="uroporphyrinogen decarboxylase 1, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=33732
     Region          9..298
                     /region_name="PLN02433"
                     /note="uroporphyrinogen decarboxylase"
                     /db_xref="CDD:215237"
     CDS             1..308
                     /gene="LOC107918050"
                     /coded_by="XM_041086874.1:450..1376"
                     /db_xref="GeneID:107918050"
ORIGIN      
        1 mddapgrkpw eafrpdgvii fsdiltplpa fgvlfdieev rgpviqspic sedclkalhp
       61 idleklhfvg dslkilrqev gdhaavlgfv gapwtiatyi veggttrtyt tvksmchtap
      121 nllrallshl tkaiseyiiy qvesgahciq ifdswggqlp pdmweqwskp yiteivsmvq
      181 nkcpkiplvl yingngglle rmkgtgvdvi gldwtvdmad grkrlgndic vqgivdpayl
      241 fsplpavtee iqrvlkcagp cghilnlghg vlvgtpeeav ahffevtksl kyesssqnha
      301 meeskllv
//
LOCUS       XP_040942809             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uroporphyrinogen decarboxylase 1, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942809
VERSION     XP_040942809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086875.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="uroporphyrinogen decarboxylase 1, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=33732
     Region          9..298
                     /region_name="PLN02433"
                     /note="uroporphyrinogen decarboxylase"
                     /db_xref="CDD:215237"
     CDS             1..308
                     /gene="LOC107918050"
                     /coded_by="XM_041086875.1:450..1376"
                     /db_xref="GeneID:107918050"
ORIGIN      
        1 mddapgrkpw eafrpdgvii fsdiltplpa fgvlfdieev rgpviqspic sedclkalhp
       61 idleklhfvg dslkilrqev gdhaavlgfv gapwtiatyi veggttrtyt tvksmchtap
      121 nllrallshl tkaiseyiiy qvesgahciq ifdswggqlp pdmweqwskp yiteivsmvq
      181 nkcpkiplvl yingngglle rmkgtgvdvi gldwtvdmad grkrlgndic vqgivdpayl
      241 fsplpavtee iqrvlkcagp cghilnlghg vlvgtpeeav ahffevtksl kyesssqnha
      301 meeskllv
//
LOCUS       XP_040942810             193 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Gossypium hirsutum].
ACCESSION   XP_040942810
VERSION     XP_040942810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086876.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10"
                     /calculated_mol_wt=20919
     Region          36..158
                     /region_name="ALOG_dom"
                     /note="ALOG domain; pfam04852"
                     /db_xref="CDD:398493"
     CDS             1..193
                     /gene="LOC107917034"
                     /coded_by="XM_041086876.1:200..781"
                     /db_xref="GeneID:107917034"
ORIGIN      
        1 mmsinkgkei aegssgpaav avgavvggvg gvgggdqrnp pplsryesqk rrdwntfgqy
       61 lrnqrppval sqcnanhvle flryldqfgk tkvhlqgcvf fgqpeppgpc tcplrqawgs
      121 ldaligrlra ayeengglpe tnpfasgair iylrevrdsq akargipykk kkkkrnplka
      181 tevsstsfpi qqp
//
LOCUS       XP_040942811             193 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Gossypium hirsutum].
ACCESSION   XP_040942811
VERSION     XP_040942811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086877.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10"
                     /calculated_mol_wt=20919
     Region          36..158
                     /region_name="ALOG_dom"
                     /note="ALOG domain; pfam04852"
                     /db_xref="CDD:398493"
     CDS             1..193
                     /gene="LOC107917034"
                     /coded_by="XM_041086877.1:144..725"
                     /db_xref="GeneID:107917034"
ORIGIN      
        1 mmsinkgkei aegssgpaav avgavvggvg gvgggdqrnp pplsryesqk rrdwntfgqy
       61 lrnqrppval sqcnanhvle flryldqfgk tkvhlqgcvf fgqpeppgpc tcplrqawgs
      121 ldaligrlra ayeengglpe tnpfasgair iylrevrdsq akargipykk kkkkrnplka
      181 tevsstsfpi qqp
//
LOCUS       XP_016700532             459 aa            linear   PLN 06-AUG-2024
DEFINITION  EP1-like glycoprotein 2 [Gossypium hirsutum].
ACCESSION   XP_016700532
VERSION     XP_016700532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..459
                     /product="EP1-like glycoprotein 2"
                     /calculated_mol_wt=51375
     Region          66..168
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cd00028"
                     /db_xref="CDD:237995"
     Site            order(77,83,85,87,89,115,117,119,121,123,146,148,150,152,
                     154)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Site            order(88,97..98,131,133,140,142,144,146..168)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Region          375..456
                     /region_name="PAN_APPLE"
                     /note="PAN/APPLE-like domain; present in N-terminal (N)
                     domains of plasminogen/ hepatocyte growth factor proteins,
                     plasma prekallikrein/coagulation factor XI and microneme
                     antigen proteins, plant receptor-like protein kinases, and
                     various nematode and leech...; cl00112"
                     /db_xref="CDD:469620"
     Site            order(395,397,415)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238074"
     CDS             1..459
                     /gene="LOC107915843"
                     /coded_by="XM_016845043.2:48..1427"
                     /db_xref="GeneID:107915843"
ORIGIN      
        1 masqlsslff qfifisvfaf attlakvpan etfefinege fgdriieyda syrvirndvy
       61 tfytypfrlc fynttpdayi famragipnd eslmrwvwda nrndpvhena tlkfgedgnf
      121 vladadgrvv wqtntankgv tgirllpngn lvlfdkngkf iwqsfdyptd tllvgqsvki
      181 ngrnklvsrk sdmdgsdgpy slildhngfi mylnnlgqql iyggwptkdf adivtfaaep
      241 edvnktntpy elvlslthlq aqpstspagn grrllqvrpi gggstinlnk vnyngtysfl
      301 rlgsdgnlra ftyfppasyl kweesfaffs syfvrecalp skcgtyglcd qrmcvacpsp
      361 ngllgwsesc kppkpvpcra gakfdyykiv gvehflnpyl ddgegpmkve qcrdkcskdc
      421 kckgfiyked asrcltapvl gtlikdvntt svgyikysk
//
LOCUS       XP_040942812             456 aa            linear   PLN 06-AUG-2024
DEFINITION  epidermis-specific secreted glycoprotein EP1 [Gossypium hirsutum].
ACCESSION   XP_040942812
VERSION     XP_040942812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086878.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..456
                     /product="epidermis-specific secreted glycoprotein EP1"
                     /calculated_mol_wt=50752
     Region          64..179
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin; smart00108"
                     /db_xref="CDD:214519"
     Region          374..454
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(393,395,411)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     CDS             1..456
                     /gene="LOC121213784"
                     /coded_by="XM_041086878.1:1..1371"
                     /db_xref="GeneID:121213784"
ORIGIN      
        1 mlgcsisils klsypkmslh ssltmsllsf sflllftfsa kaivppsetf rfvndgefgp
       61 yvveyganyr visianapfq lafynttsna ftlalrmatt rseslfrwvw eanrgnpvre
      121 natfslgtdg nlvladadgr iawqsntank gvvgfqllpd gnmvlhdsng kfiwqsfdhp
      181 tdtllvgqsf riggatklvs rasaqnnvdg ayslvmepkq lvlqykgmns pkplvyfkss
      241 vwpstqdgtl qtvtlnveet sdgfayyvll dytvanlssr tgnliltrpk ynstlsilrl
      301 vidgnlrvft yydkvdlqaw eetftlfsrd siwgtecelp ercgnfglce enqcvacpsp
      361 ngllgwsrnc qpkkvncrpn gfsyfklegv dhfmsqyneg egikesdcgr kctsdckclg
      421 yfyhretskc wtanelktla kasnsshvgy ikvpnk
//
LOCUS       XP_040942813             969 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoenolpyruvate carboxylase, housekeeping isozyme [Gossypium
            hirsutum].
ACCESSION   XP_040942813
VERSION     XP_040942813.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086879.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..969
                     /product="phosphoenolpyruvate carboxylase, housekeeping
                     isozyme"
                     /calculated_mol_wt=110536
     Region          35..969
                     /region_name="PEPcase"
                     /note="Phosphoenolpyruvate carboxylase; pfam00311"
                     /db_xref="CDD:425598"
     CDS             1..969
                     /gene="LOC107915834"
                     /coded_by="XM_041086879.1:357..3266"
                     /db_xref="GeneID:107915834"
ORIGIN      
        1 matnnnnskl eklasidaql ralvpakvse ddklveydal lldrfldilq dlhgedlret
       61 vqecyelsae yegkstpkkl eelgnvltsl dpgdsiviak afshmlnlan laeevqiayr
      121 rriklkkgdf adensattes dieetlkrlv vdlkkspeev fdalknqtvd lvftahptqs
      181 vrrsllqkhg rirnclaqly akditpddkq eldealqrei qaafrtdeir rtpptpqdem
      241 ragmsyfhet vwkgvpkflr rvdtalknig inervpynap liqfsswmgg drdgnprvtp
      301 evtrdvclla rmmaanlyys qiedlmfels mwrcsdelrv radelhrssr rdakhyiefw
      361 kkvppnepyr vilgdvrdkl yqtrersrqm lshgisdipe eetftnieqf leplelcyrs
      421 lcscgdrpia dgslldflrq vstfglslvr ldirqesdrh tdvldaitkh leigsyrews
      481 eeqkqewlls elsgrrplfg pdlpkteeia dvldtfsvla elpadnfgay iismatapsd
      541 vlavellqre chvkqplrvv plfekladle aapaalarlf sidwyrnrin gkqevmigys
      601 dsgkdagrls aawqlykaqe elinvakqfg vkltmfhgrg gtvgrgggpt hlailsqppe
      661 tihgslrvtv qgevieqsfg eehlcfrtlq rftaatlehg mhppvspkpe wralmdemav
      721 vateeyrsiv fkeprfveyf rlatpeleyg rmnigsrpsk rkpsggiesl raipwifawt
      781 qtrfhlpvwl gfgaafkhvi qkdiknllml qemynewpff rvtidlvemv fakgdpgiaa
      841 lydkllvsee lwsfgerlrt nfeetkslll qiaghkdlle gdpylkqrlr lrdsyittln
      901 vcqaytlkri rdpnynvklr phiskeimes skpadelvkl nptseyapgl edtliltmkg
      961 iaagmqntg
//
LOCUS       XP_040942814             263 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRICTOSIDINE SYNTHASE-LIKE 10 [Gossypium hirsutum].
ACCESSION   XP_040942814
VERSION     XP_040942814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086880.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..263
                     /product="protein STRICTOSIDINE SYNTHASE-LIKE 10"
                     /calculated_mol_wt=29959
     Region          62..224
                     /region_name="SGL"
                     /note="SMP-30/Gluconolactonase/LRE-like region; pfam08450"
                     /db_xref="CDD:462480"
     Region          100..165
                     /region_name="Str_synth"
                     /note="Strictosidine synthase; cl22863"
                     /db_xref="CDD:354965"
     CDS             1..263
                     /gene="LOC107915595"
                     /coded_by="XM_041086880.1:59..850"
                     /db_xref="GeneID:107915595"
ORIGIN      
        1 mkkyqllflm lylalcvnqs hqrilsqkhd akkfdeqflh qkqnvivskd celinlvkvt
       61 gpesiafdck gegpyvgvsd grilkwhgpk lgwkefaips siryadflsk stdnsgrllk
      121 ydlhtkntfv iytglmfpng valnknhsfl lvaettrrri lkfylgannl epevfaklpr
      181 vpdnikmndk gefwvalnag rlgkidddvp dpirtkydqe grilkqldgn nedvfssise
      241 inevnrtlyi gsvtklyvti lkf
//
LOCUS       XP_040942815             120 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942815
VERSION     XP_040942815.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086881.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="ubiquitin-conjugating enzyme E2 36 isoform X1"
                     /calculated_mol_wt=13528
     Region          1..116
                     /region_name="UBCc_UBE2N"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; cd23813"
                     /db_xref="CDD:467433"
     CDS             1..120
                     /gene="LOC107915831"
                     /coded_by="XM_041086881.1:359..721"
                     /db_xref="GeneID:107915831"
ORIGIN      
        1 mryfnvmilg ptqspyeggv fklelflpee ypmaapkvrf ltkiyhpnid klgricldil
       61 kdkwspalqi rtvllsiqal lsapnpddpl seniakhwkt neaeavetak ewtrlyatga
//
LOCUS       XP_016700523             120 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016700523
VERSION     XP_016700523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845034.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="ubiquitin-conjugating enzyme E2 36 isoform X1"
                     /calculated_mol_wt=13528
     Region          1..116
                     /region_name="UBCc_UBE2N"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; cd23813"
                     /db_xref="CDD:467433"
     CDS             1..120
                     /gene="LOC107915831"
                     /coded_by="XM_016845034.2:268..630"
                     /db_xref="GeneID:107915831"
ORIGIN      
        1 mryfnvmilg ptqspyeggv fklelflpee ypmaapkvrf ltkiyhpnid klgricldil
       61 kdkwspalqi rtvllsiqal lsapnpddpl seniakhwkt neaeavetak ewtrlyatga
//
LOCUS       XP_016700524             120 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016700524
VERSION     XP_016700524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845035.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="ubiquitin-conjugating enzyme E2 36 isoform X1"
                     /calculated_mol_wt=13528
     Region          1..116
                     /region_name="UBCc_UBE2N"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; cd23813"
                     /db_xref="CDD:467433"
     CDS             1..120
                     /gene="LOC107915831"
                     /coded_by="XM_016845035.2:216..578"
                     /db_xref="GeneID:107915831"
ORIGIN      
        1 mryfnvmilg ptqspyeggv fklelflpee ypmaapkvrf ltkiyhpnid klgricldil
       61 kdkwspalqi rtvllsiqal lsapnpddpl seniakhwkt neaeavetak ewtrlyatga
//
LOCUS       XP_040942816             115 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942816
VERSION     XP_040942816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086882.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="ubiquitin-conjugating enzyme E2 36 isoform X2"
                     /calculated_mol_wt=12883
     Region          1..108
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..115
                     /gene="LOC107915831"
                     /coded_by="XM_041086882.1:354..701"
                     /db_xref="GeneID:107915831"
ORIGIN      
        1 mryfnvmilg ptqspyeggv fklelflpee ypmaapkvrf ltkiyhpnid klgricldil
       61 kdkwspalqi rtvllsiqal lsapnpddpl seniakhwkt neaeavetvs ltics
//
LOCUS       XP_016700525             115 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016700525
VERSION     XP_016700525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="ubiquitin-conjugating enzyme E2 36 isoform X2"
                     /calculated_mol_wt=12883
     Region          1..108
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..115
                     /gene="LOC107915831"
                     /coded_by="XM_016845036.2:268..615"
                     /db_xref="GeneID:107915831"
ORIGIN      
        1 mryfnvmilg ptqspyeggv fklelflpee ypmaapkvrf ltkiyhpnid klgricldil
       61 kdkwspalqi rtvllsiqal lsapnpddpl seniakhwkt neaeavetvs ltics
//
LOCUS       XP_040942818             115 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 36 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942818
VERSION     XP_040942818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086884.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="ubiquitin-conjugating enzyme E2 36 isoform X2"
                     /calculated_mol_wt=12883
     Region          1..108
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..115
                     /gene="LOC107915831"
                     /coded_by="XM_041086884.1:219..566"
                     /db_xref="GeneID:107915831"
ORIGIN      
        1 mryfnvmilg ptqspyeggv fklelflpee ypmaapkvrf ltkiyhpnid klgricldil
       61 kdkwspalqi rtvllsiqal lsapnpddpl seniakhwkt neaeavetvs ltics
//
LOCUS       XP_016700522             702 aa            linear   PLN 06-AUG-2024
DEFINITION  TPR repeat-containing thioredoxin TTL1 [Gossypium hirsutum].
ACCESSION   XP_016700522
VERSION     XP_016700522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845033.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..702
                     /product="TPR repeat-containing thioredoxin TTL1"
                     /calculated_mol_wt=76812
     Region          231..259
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(232,235..236,239..240,242,266,269..270,273..274,
                     276..277,300,303..304,307..308,311)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          244..566
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          264..294
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          423..450
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          434..>585
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(472..473,476..477,479,503,506..507,510..511,
                     513..514,537,540..541,544..545,548)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          472..496
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          501..531
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          536..560
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          607..691
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(628,631)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..702
                     /gene="LOC107915830"
                     /coded_by="XM_016845033.2:572..2680"
                     /db_xref="GeneID:107915830"
ORIGIN      
        1 mshlgkpete lgrdydklad qlrdslsydd nkpdfreldl gspvsplrtg qqgltmtttt
       61 ttttttssss sssrsvsgrn sssatarrse sgrnnhsgel sgssetspta stgnmkpaqt
      121 rskpntatth pliysgqsta nspavnvlpt gnicpsgrii ktgmavnrss rtdvlgsgsg
      181 nyghgsimra ggvgtgpvtp srgtafepsh tlgnrgnasd vmrkamgnle peelkkvgne
      241 mykkghfvea lslydkaial spanaayrsn raaaltalgr vgeavkecee avrldpnygr
      301 ahqrlaslll rvghvenark hilfpgqpqd pmesqklqav erhlnkctda rrirdwrsal
      361 readagiaag adfspqlfmc rveallklhq lddaesslsv vpklescsns lqtkyfgmla
      421 egyiffvqaq memalgrfen avtaaekagq vdprnvevav llnnvrlvar arargndlfk
      481 serfteacsa ygdglrldps nsilycnraa cwfklgrwer siedcdqals iqpnyikall
      541 rraacnskle rwaeavrdye vlrrelpndn evaeslfhaq valkksrgee vynmkfggev
      601 eevcsleqfr aaislpgisv vhfkmasnlq ckqispfvda lcgrypsinf lkvdinespv
      661 iantenvriv ptfkiykngs rvkemvcpsr emlehsvrhy sf
//
LOCUS       XP_016702518             482 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 87A3 [Gossypium hirsutum].
ACCESSION   XP_016702518
VERSION     XP_016702518.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702518.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="cytochrome P450 87A3"
                     /calculated_mol_wt=55353
     Region          68..479
                     /region_name="CYP90-like"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; cd11043"
                     /db_xref="CDD:410669"
     Site            order(130,134,141,185,286..287,290..291,294..295,298,353,
                     362,364,387,422..424,428..432,435..436)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410669"
     Site            order(205..206,286,289..290,294,360..363)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410669"
     CDS             1..482
                     /gene="LOC107917739"
                     /coded_by="XM_016847029.2:48..1496"
                     /db_xref="GeneID:107917739"
ORIGIN      
        1 mimeiwyvwv fiisflsvsv gnwiyrwrnp kckgklppgs mgfpligetl sffvtsnsid
       61 mhpfvnerlk rygplfktni agrpvavssd pefnyfvlqq egklielyym dsfsqtvhnd
      121 nlsnlggyfq rylrrsilrh fgheplkrkl lseledvinh evhkwtnlpe vdvklqtvpm
      181 lfdltsqilm sykpeknlge dlnnmlqsim tfplyipgta fykciqkkrk aiklttwvle
      241 ermkgysydn saegcnkkgd fldevigdig keafltkefv pyllfgllla tvetisptvt
      301 latmylldnp salqqlteeh eeilknreda nsglvweeyk smtftryvin etlrlenvlp
      361 gmlrkviadi hvdeytipkg willvmptal hlnpniyedp ltfnpsrwkn igsngmaknf
      421 mpfgggdrpc agaefskvlm avflhvwvtk frftkvkggn ivrapilgfp dgfyvnvsrk
      481 hc
//
LOCUS       XP_040942819             480 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 87A3 [Gossypium hirsutum].
ACCESSION   XP_040942819
VERSION     XP_040942819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086885.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="cytochrome P450 87A3"
                     /calculated_mol_wt=54988
     Region          66..477
                     /region_name="CYP90-like"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; cd11043"
                     /db_xref="CDD:410669"
     Site            order(128,132,139,183,284..285,288..289,292..293,296,351,
                     360,362,385,420..422,426..430,433..434)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410669"
     Site            order(203..204,284,287..288,292,358..361)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410669"
     CDS             1..480
                     /gene="LOC107917740"
                     /coded_by="XM_041086885.1:104..1546"
                     /db_xref="GeneID:107917740"
ORIGIN      
        1 meiwyvwvfi isflsvsvgn wiyrwrnpkc kgklppgsmg fpligetlsf fatsnsidmh
       61 sfinerlkry gplfktniag rpvavssdpe fnyfllqqeg klielyymds fsqmihhdnm
      121 snlggyfhry lrrsilghfg heplkrklls efedvinqel hkwtnlpevd vkrqtvpmlf
      181 dltsqilmsh kpeenlgedl nnmlqsimtf plyipgttfy kciqkkrkai kltsrvveer
      241 mkgyscdnsa egcnktgdyl deivgdigke afltkefvpy llfglllatv etisptitla
      301 tmylldnpsa lqqlteehee ilknredans glvweeyksm tftryvinet lrlenvlpgm
      361 lrkviadihv dgytipkgwv llvmptalhl npniyedplt fnpsrwknig sngmaknfip
      421 fgggnrpcag aefskvlvav flhvwvtkfr ftkikggniv rspileftdg fyvnvsrkhg
//
LOCUS       XP_040942820             434 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DJ-1 homolog B [Gossypium hirsutum].
ACCESSION   XP_040942820
VERSION     XP_040942820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086886.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..434
                     /product="protein DJ-1 homolog B"
                     /calculated_mol_wt=46214
     Region          48..224
                     /region_name="not_thiJ"
                     /note="DJ-1 family protein; TIGR01383"
                     /db_xref="CDD:213612"
     Site            147
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153229"
     Region          253..416
                     /region_name="GATase1_DJ-1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain found in Human DJ-1; cd03135"
                     /db_xref="CDD:153229"
     Site            352
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153229"
     CDS             1..434
                     /gene="LOC107917741"
                     /coded_by="XM_041086886.1:107..1411"
                     /db_xref="GeneID:107917741"
ORIGIN      
        1 mavlhlrhlt hhsllstskl hhhfrfsplk sprfscsasa sstmakqvlv piangtepme
       61 avitidvirr sgadvtvasv ekelrvdach gvkivadalv adckntvfdl ialpggmpga
      121 snfkdcgale slvkkqaadg rlyaavcasp avalgswgll kglkatcyps fmeqlqscat
      181 avesrvqqdg kvvtsrgpgt tmefavtlve qlygkekade vsgplvmrpn hgdeytitel
      241 nplewkcnnv pqvlvpiadg seemeavmii dilrrakanv vvasvgdnle ilasrkvklv
      301 admlldeaak ltydlvvlpg glggaqafak sdklvnllkk qaesnkpyga icaspalvle
      361 phgllkgkka taypamcdkl sdqshidnrv vvdgnlitsr gpgtsmefal givekffgrp
      421 kalelakgll vvrq
//
LOCUS       XP_016701954             351 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,3-galactosyltransferase 14 [Gossypium hirsutum].
ACCESSION   XP_016701954
VERSION     XP_016701954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..351
                     /product="probable beta-1,3-galactosyltransferase 14"
                     /calculated_mol_wt=39795
     Region          <84..338
                     /region_name="PLN03193"
                     /note="beta-1,3-galactosyltransferase; Provisional"
                     /db_xref="CDD:178735"
     CDS             1..351
                     /gene="LOC107917080"
                     /coded_by="XM_016846465.2:107..1162"
                     /db_xref="GeneID:107917080"
ORIGIN      
        1 mpsspkffhs rhpppatrlt rstalivfst lsflfslyvf lsstdcghqc lsdlrsvrvl
       61 ldkpgnvnit atsdgdvdvn gtkrhkvmgf vgiqtgfrsv grrrslrktw mpsyhqglqr
      121 leeatglafr fvigrtndrs kmaqlgreva kyddfllldf eeeysklpyk tlaffkaaya
      181 lydsdfyvka dddiylrpdr lslllakers hsqtylgcmk kgpvftdpkl kwyeplsyll
      241 gseyflhayg plyalsadvv aslvalrnns frmfsnedvt igawmlamnv nfennrrlce
      301 rkctptfiav ldipkcsglc npetrilelh rqemcsngst fpsddkqlsl a
//
LOCUS       XP_016701670             609 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 10 [Gossypium hirsutum].
ACCESSION   XP_016701670
VERSION     XP_016701670.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846181.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701670.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="ABC transporter G family member 10"
                     /calculated_mol_wt=68099
     Region          51..608
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..609
                     /gene="LOC107916807"
                     /coded_by="XM_016846181.2:133..1962"
                     /db_xref="GeneID:107916807"
ORIGIN      
        1 melpvkspds ggrkypyrle trdlsyklst kfedyfrcdf cggnegraaa kfilkgvnce
       61 arpgqvtaia gpsgagkttl ldilagkipp cevssgevlv ngkpinvkvf rrvsgyvtqd
      121 dalfplltve etlmysallr lpggrkeags rvkelmkelg lehvagsrir egsnngisgg
      181 errrvsigvd lvhdpavili deptsgldsa salhavtllk smavnqgkti vltihqpgfr
      241 ilelfdrivl lsngfvvhng glnlleerlk fadhriprhv nvlefaidvi etlpvpnpgt
      301 lsninredrk ittpirferk llvypnsrfd evlilgqrfc snifrtkqlf atrviqalva
      361 gfilgtiyfn vgndkgrial qtqtgffaft ltfllsstte glpiflqerr ilmretsrga
      421 yrvssyvlsn tlvflpfllm igilftspvy wlvglrkdtv dgflyfslvv wmvllmansf
      481 vacfsalvpn fimgnsviag lmgsfflfsg yfiakdkips ywvfmhylsl fkypfecfmi
      541 neyggeqger kcieiengec rlygssflrr qdlkdsqkwt nvgvmlgfiv gyrvlglvil
      601 wfrcykarn
//
LOCUS       XP_016702716             393 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 8,
            chloroplastic/mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016702716
VERSION     XP_016702716.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702716.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="multiple organellar RNA editing factor 8,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=43247
     Region          <253..>388
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     CDS             1..393
                     /gene="LOC107917862"
                     /coded_by="XM_016847227.2:222..1403"
                     /db_xref="GeneID:107917862"
ORIGIN      
        1 matqalsral lsnpkalssl lfpssrsfss fsssssssaa sstktlitps pppslsflrr
       61 lrappyysll rgslspvvks fstraarssl ndpnpnysnr ppketilldg cdfehwlvvm
      121 eppkedatrd diidsyiktl aqvvgsedea rmkiysvstr hyyafgalvs eevsykikel
      181 pgvrwvlpds yldvknkdyg gepfingqav pydpkyheew vrnnaraner nrrndrprny
      241 drsrnyerrr enmntrdsqm ppqnqgmqnv apktagmppn nmggmpprnm ggmppqnmgg
      301 mppnnmgrmp pnnmggmtpn qgwsgnmpgn apnfqtgpny gnapgnaqnf qpgpgpnygn
      361 tpyqgatpna qyhqnnyppn vgggnmpggn yqs
//
LOCUS       XP_016702615             464 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702615
VERSION     XP_016702615.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847126.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702615.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..464
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=52152
     Region          77..120
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          77..120
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Region          156..238
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(177..178,181..182,184..185,189,198,201..202,205,
                     207..208,211..212)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     Region          <312..>439
                     /region_name="PEARLI-4"
                     /note="Arabidopsis phospholipase-like protein (PEARLI 4);
                     pfam05278"
                     /db_xref="CDD:253129"
     CDS             1..464
                     /gene="LOC107917805"
                     /coded_by="XM_016847126.2:317..1711"
                     /db_xref="GeneID:107917805"
ORIGIN      
        1 megyssdgss sfftskkpvd gqwmelvgfv edeaeisain gglaqsltdq dqlnqlgtse
       61 gsyqtksegg rpklslaqkr enkklsdyry rqkrkitade lsaenkhlke enegliaenr
      121 llksklelll sygdskaeae pssgsgkpme qkakqdysnl garraqatdg hramreqise
      181 stkilkdlip acnkvqgall ldeifsyiqs lqreselqfl slelaainpr tnpaieafpl
      241 kdfmdvdmne fqnllqmilv nvdlnptkpe vatccndeip isdlltkiea eeeskgkfsd
      301 fdgldgdrik hgkysfphsl iptletiida cgdisatskm npsitemvyi mfcasvkemn
      361 dlrleeited rilkwrdaik dalrisfkvd famehlkkia cayigqierq klkdlamris
      421 rleddlnfrk qelakaykqs kvyidvadnf ngklvswgmf qsca
//
LOCUS       XP_016702616             450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702616
VERSION     XP_016702616.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702616.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=50426
     Region          77..120
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          77..120
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Region          156..238
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(177..178,181..182,184..185,189,198,201..202,205,
                     207..208,211..212)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     Region          <298..>421
                     /region_name="PEARLI-4"
                     /note="Arabidopsis phospholipase-like protein (PEARLI 4);
                     pfam05278"
                     /db_xref="CDD:253129"
     CDS             1..450
                     /gene="LOC107917805"
                     /coded_by="XM_016847127.2:317..1669"
                     /db_xref="GeneID:107917805"
ORIGIN      
        1 megyssdgss sfftskkpvd gqwmelvgfv edeaeisain gglaqsltdq dqlnqlgtse
       61 gsyqtksegg rpklslaqkr enkklsdyry rqkrkitade lsaenkhlke enegliaenr
      121 llksklelll sygdskaeae pssgsgkpme qkakqdysnl garraqatdg hramreqise
      181 stkilkdlip acnkvqgall ldeifsyiqs lqreselqfl slelaainpr tnpaieafpl
      241 kdmilvnvdl nptkpevatc cndeipisdl ltkieaeees kgkfsdfdgl dgdrikhgky
      301 sfphsliptl etiidacgdi satskmnpsi temvyimfca svkemndlrl eeitedrilk
      361 wrdaikdalr isfkvdfame hlkkiacayi gqierqklkd lamrisrled dlnfrkqela
      421 kaykqskvyi dvadnfngkl vswgmfqsca
//
LOCUS       XP_040942822             381 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942822
VERSION     XP_040942822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086888.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=42948
     CDS             1..381
                     /gene="LOC107917805"
                     /coded_by="XM_041086888.1:335..1480"
                     /db_xref="GeneID:107917805"
ORIGIN      
        1 mdlspsevss pfknneadqs kylktelits vepqlaesga skclaynkri gfkrgsivse
       61 idkrkatmpk dqqyrmrkkm elqklkdeir wyqeelsqlr akqqlpaqdl dkveccfsqs
      121 tsqwhddqsv svqsssiqkr qriqdqqkis sndggvavsq nltnnkertp naraavnepa
      181 tehpesaqsg scsaevakik lpmfltefht evasnvdlsd ftgldgeqrr fgrfsfplsl
      241 iptverinsv ygdisatslv spsvsttvyv lfcavirdme hlrleevted iilkwrdvik
      301 dalrlgfnva famehlkkvv fayigqrgck llhyidskis tleaevndwk kkrteiyees
      361 kmcvnaaenf igvpvstglf p
//
LOCUS       XP_040942824             381 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942824
VERSION     XP_040942824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086890.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=42948
     CDS             1..381
                     /gene="LOC107917805"
                     /coded_by="XM_041086890.1:313..1458"
                     /db_xref="GeneID:107917805"
ORIGIN      
        1 mdlspsevss pfknneadqs kylktelits vepqlaesga skclaynkri gfkrgsivse
       61 idkrkatmpk dqqyrmrkkm elqklkdeir wyqeelsqlr akqqlpaqdl dkveccfsqs
      121 tsqwhddqsv svqsssiqkr qriqdqqkis sndggvavsq nltnnkertp naraavnepa
      181 tehpesaqsg scsaevakik lpmfltefht evasnvdlsd ftgldgeqrr fgrfsfplsl
      241 iptverinsv ygdisatslv spsvsttvyv lfcavirdme hlrleevted iilkwrdvik
      301 dalrlgfnva famehlkkvv fayigqrgck llhyidskis tleaevndwk kkrteiyees
      361 kmcvnaaenf igvpvstglf p
//
LOCUS       XP_040942825             365 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942825
VERSION     XP_040942825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086891.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..365
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=41235
     CDS             1..365
                     /gene="LOC107917805"
                     /coded_by="XM_041086891.1:335..1432"
                     /db_xref="GeneID:107917805"
ORIGIN      
        1 mdlspsevss pfknneadqs kylktelits vepqlaesga skclaynkri gfkrgsivse
       61 idkrkatmpk dqqyrmrkkm elqklkdeir wyqeelsqlr akqqlpaqdl dksssiqkrq
      121 riqdqqkiss ndggvavsqn ltnnkertpn araavnepat ehpesaqsgs csaevakikl
      181 pmfltefhte vasnvdlsdf tgldgeqrrf grfsfplsli ptverinsvy gdisatslvs
      241 psvsttvyvl fcavirdmeh lrleevtedi ilkwrdvikd alrlgfnvaf amehlkkvvf
      301 ayigqrgckl lhyidskist leaevndwkk krteiyeesk mcvnaaenfi gvpvstgdkl
      361 lwrqs
//
LOCUS       XP_040942826             365 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942826
VERSION     XP_040942826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086892.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..365
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=41235
     CDS             1..365
                     /gene="LOC107917805"
                     /coded_by="XM_041086892.1:313..1410"
                     /db_xref="GeneID:107917805"
ORIGIN      
        1 mdlspsevss pfknneadqs kylktelits vepqlaesga skclaynkri gfkrgsivse
       61 idkrkatmpk dqqyrmrkkm elqklkdeir wyqeelsqlr akqqlpaqdl dksssiqkrq
      121 riqdqqkiss ndggvavsqn ltnnkertpn araavnepat ehpesaqsgs csaevakikl
      181 pmfltefhte vasnvdlsdf tgldgeqrrf grfsfplsli ptverinsvy gdisatslvs
      241 psvsttvyvl fcavirdmeh lrleevtedi ilkwrdvikd alrlgfnvaf amehlkkvvf
      301 ayigqrgckl lhyidskist leaevndwkk krteiyeesk mcvnaaenfi gvpvstgdkl
      361 lwrqs
//
LOCUS       XP_040942827             650 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942827
VERSION     XP_040942827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086893.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72449
     CDS             1..650
                     /gene="LOC107917743"
                     /coded_by="XM_041086893.1:1027..2979"
                     /db_xref="GeneID:107917743"
ORIGIN      
        1 mnpselsypv imdgsaatas gsfpasqmnn gsmanqades qnyqsiypps lqsvvgmnfq
       61 ptghasfnqg yqvqsniqsf nhtsqpqske tyqtwslnhq sdlhsqpcqs ivagqcltdl
      121 ltfrehtqpt sqpqlnetrq nqtlihhsns qhtgqfqsnv agqsqtdltn svpsdslvhp
      181 qptsqpqlne trqyqtlihh snsqhtgqfq ssvpgqnqtd ltnsvqsnsl vhpqptsqpq
      241 lnhgyssqgs qqkrtrrpra aneaerrerr kesdqkykkk mkqqkietna eienlkrknv
      301 ilvaqkqsls diiiqmqpna qipahmrssl dcgqqpneqi paqmgqlynq qihypsfsap
      361 vagfprshhg edseefdqdp evsalrmqrd slvqllqgst scqesneqtp stfqqplhsd
      421 csaqqqlngs qfsndvqdpp wtysnshggg iasssnptek qdnsralmar ilkrigekrk
      481 stvtysdfpg lgidervavg kysfpkslks tvenithmhg dvsenstmpq cvdetiyilf
      541 catikemddl qlpevtenci ikwsdtikaa lgikfdvgfa mdhlkdkiip afvgqihcqr
      601 vdemeekisn leaslnalkq dhakeceqsk vykdamdkfn gksvssglfm
//
LOCUS       XP_016702521             650 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702521
VERSION     XP_016702521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847032.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..650
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72449
     CDS             1..650
                     /gene="LOC107917743"
                     /coded_by="XM_016847032.2:546..2498"
                     /db_xref="GeneID:107917743"
ORIGIN      
        1 mnpselsypv imdgsaatas gsfpasqmnn gsmanqades qnyqsiypps lqsvvgmnfq
       61 ptghasfnqg yqvqsniqsf nhtsqpqske tyqtwslnhq sdlhsqpcqs ivagqcltdl
      121 ltfrehtqpt sqpqlnetrq nqtlihhsns qhtgqfqsnv agqsqtdltn svpsdslvhp
      181 qptsqpqlne trqyqtlihh snsqhtgqfq ssvpgqnqtd ltnsvqsnsl vhpqptsqpq
      241 lnhgyssqgs qqkrtrrpra aneaerrerr kesdqkykkk mkqqkietna eienlkrknv
      301 ilvaqkqsls diiiqmqpna qipahmrssl dcgqqpneqi paqmgqlynq qihypsfsap
      361 vagfprshhg edseefdqdp evsalrmqrd slvqllqgst scqesneqtp stfqqplhsd
      421 csaqqqlngs qfsndvqdpp wtysnshggg iasssnptek qdnsralmar ilkrigekrk
      481 stvtysdfpg lgidervavg kysfpkslks tvenithmhg dvsenstmpq cvdetiyilf
      541 catikemddl qlpevtenci ikwsdtikaa lgikfdvgfa mdhlkdkiip afvgqihcqr
      601 vdemeekisn leaslnalkq dhakeceqsk vykdamdkfn gksvssglfm
//
LOCUS       XP_016702525             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702525
VERSION     XP_016702525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45292
     Region          68..117
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          68..117
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(69..70,72..74,76..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Site            order(84,87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,112..113,115..116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..397
                     /gene="LOC107917746"
                     /coded_by="XM_016847036.2:871..2064"
                     /db_xref="GeneID:107917746"
ORIGIN      
        1 mddttseats pssrmdsssm ynqsnqtyqf hsqqqmsysq atqdrflqge alqqprrgcc
       61 rgkmsederk arkrqtdrdy rqnkkakfve mtsqnqrlqd qnrelmnenr qlkeeisglk
      121 gkgqlpvevm rrqdsyishp psqvdqnvql qdhygmeftn gddvynfdgf wldelqlppd
      181 dgmttngria lnepaiehpe ssqsglcpak vdknklhmfl tklhpevgsn vdpsgwtgll
      241 keeqrrmgrf sfplsliptv erikvaygdv setclispsv seksyvffca mirdmehlrl
      301 dqvtedlmln wgdvikdalg lgfkvqfave hlkkvayaff gqsgckwlnd vdskistlea
      361 evncwkkkra eiyeeskmsi navesfngvp istglfp
//
LOCUS       XP_016702526             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702526
VERSION     XP_016702526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847037.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45292
     Region          68..117
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          68..117
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(69..70,72..74,76..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Site            order(84,87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,112..113,115..116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..397
                     /gene="LOC107917746"
                     /coded_by="XM_016847037.2:808..2001"
                     /db_xref="GeneID:107917746"
ORIGIN      
        1 mddttseats pssrmdsssm ynqsnqtyqf hsqqqmsysq atqdrflqge alqqprrgcc
       61 rgkmsederk arkrqtdrdy rqnkkakfve mtsqnqrlqd qnrelmnenr qlkeeisglk
      121 gkgqlpvevm rrqdsyishp psqvdqnvql qdhygmeftn gddvynfdgf wldelqlppd
      181 dgmttngria lnepaiehpe ssqsglcpak vdknklhmfl tklhpevgsn vdpsgwtgll
      241 keeqrrmgrf sfplsliptv erikvaygdv setclispsv seksyvffca mirdmehlrl
      301 dqvtedlmln wgdvikdalg lgfkvqfave hlkkvayaff gqsgckwlnd vdskistlea
      361 evncwkkkra eiyeeskmsi navesfngvp istglfp
//
LOCUS       XP_016702528             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702528
VERSION     XP_016702528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847039.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45292
     Region          68..117
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          68..117
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(69..70,72..74,76..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Site            order(84,87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,112..113,115..116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..397
                     /gene="LOC107917746"
                     /coded_by="XM_016847039.2:582..1775"
                     /db_xref="GeneID:107917746"
ORIGIN      
        1 mddttseats pssrmdsssm ynqsnqtyqf hsqqqmsysq atqdrflqge alqqprrgcc
       61 rgkmsederk arkrqtdrdy rqnkkakfve mtsqnqrlqd qnrelmnenr qlkeeisglk
      121 gkgqlpvevm rrqdsyishp psqvdqnvql qdhygmeftn gddvynfdgf wldelqlppd
      181 dgmttngria lnepaiehpe ssqsglcpak vdknklhmfl tklhpevgsn vdpsgwtgll
      241 keeqrrmgrf sfplsliptv erikvaygdv setclispsv seksyvffca mirdmehlrl
      301 dqvtedlmln wgdvikdalg lgfkvqfave hlkkvayaff gqsgckwlnd vdskistlea
      361 evncwkkkra eiyeeskmsi navesfngvp istglfp
//
LOCUS       XP_016702527             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702527
VERSION     XP_016702527.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45292
     Region          68..117
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          68..117
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(69..70,72..74,76..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Site            order(84,87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,112..113,115..116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..397
                     /gene="LOC107917746"
                     /coded_by="XM_016847038.2:786..1979"
                     /db_xref="GeneID:107917746"
ORIGIN      
        1 mddttseats pssrmdsssm ynqsnqtyqf hsqqqmsysq atqdrflqge alqqprrgcc
       61 rgkmsederk arkrqtdrdy rqnkkakfve mtsqnqrlqd qnrelmnenr qlkeeisglk
      121 gkgqlpvevm rrqdsyishp psqvdqnvql qdhygmeftn gddvynfdgf wldelqlppd
      181 dgmttngria lnepaiehpe ssqsglcpak vdknklhmfl tklhpevgsn vdpsgwtgll
      241 keeqrrmgrf sfplsliptv erikvaygdv setclispsv seksyvffca mirdmehlrl
      301 dqvtedlmln wgdvikdalg lgfkvqfave hlkkvayaff gqsgckwlnd vdskistlea
      361 evncwkkkra eiyeeskmsi navesfngvp istglfp
//
LOCUS       XP_016702530             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702530
VERSION     XP_016702530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847041.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45292
     Region          68..117
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cd14686"
                     /db_xref="CDD:269834"
     Region          68..117
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(69..70,72..74,76..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     Site            order(84,87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,112..113,115..116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..397
                     /gene="LOC107917746"
                     /coded_by="XM_016847041.2:541..1734"
                     /db_xref="GeneID:107917746"
ORIGIN      
        1 mddttseats pssrmdsssm ynqsnqtyqf hsqqqmsysq atqdrflqge alqqprrgcc
       61 rgkmsederk arkrqtdrdy rqnkkakfve mtsqnqrlqd qnrelmnenr qlkeeisglk
      121 gkgqlpvevm rrqdsyishp psqvdqnvql qdhygmeftn gddvynfdgf wldelqlppd
      181 dgmttngria lnepaiehpe ssqsglcpak vdknklhmfl tklhpevgsn vdpsgwtgll
      241 keeqrrmgrf sfplsliptv erikvaygdv setclispsv seksyvffca mirdmehlrl
      301 dqvtedlmln wgdvikdalg lgfkvqfave hlkkvayaff gqsgckwlnd vdskistlea
      361 evncwkkkra eiyeeskmsi navesfngvp istglfp
//
LOCUS       XP_040942828             438 aa            linear   PLN 06-AUG-2024
DEFINITION  UBP1-associated protein 2C [Gossypium hirsutum].
ACCESSION   XP_040942828
VERSION     XP_040942828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086894.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..438
                     /product="UBP1-associated protein 2C"
                     /calculated_mol_wt=44601
     Region          76..151
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          169..243
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..438
                     /gene="LOC107917744"
                     /coded_by="XM_041086894.1:97..1413"
                     /db_xref="GeneID:107917744"
ORIGIN      
        1 mqymdptkkr kldengtvsa qsepdpitkl tpqdgrklie rftvdqlldi lqdavcrhvd
       61 vlsavrsiad qdpsqrklfi rglgwdtttd glrslfsvyg eleeavvild kttgkskgyg
      121 fvtfkhvdga llalkepskk idgrvtvtql aaagnsatns npvdihmrki yvanvpydmp
      181 adkllghfsq ygeieegplg fdkqtgksrg falfvyktae gaqaalaepv knidgrqmnc
      241 klaiegkkgk qgqdgmmqsg ggvpgnaemg mgghgggygg pgsyggfsgg mqgppgpmgh
      301 phplnssgvg vgalsgnggv aaggysglgg pyggyggqgs tgyggpgsag yggpgstvyg
      361 gltgagaggg lgaasggssl yrmppssagm ptggypetah yslsssaafp sqlhqgagts
      421 paprvppgam ypngppfy
//
LOCUS       XP_016702531             339 aa            linear   PLN 06-AUG-2024
DEFINITION  malate dehydrogenase, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016702531
VERSION     XP_016702531.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702531.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="malate dehydrogenase, mitochondrial"
                     /calculated_mol_wt=35337
     Region          9..331
                     /region_name="PLN00106"
                     /note="malate dehydrogenase"
                     /db_xref="CDD:215058"
     CDS             1..339
                     /gene="LOC107917747"
                     /coded_by="XM_016847042.2:2845..3864"
                     /db_xref="GeneID:107917747"
ORIGIN      
        1 mfrsvarsaa gkhllrrgya tesvpdrkva vlgaaggigq plallmklnp lvsrlalydi
       61 antpgvaadv shvntrseva gyvgedqlkq alegcdvvii pagvprkpgm trddlfnina
      121 givkglcaai akycpnalvn misnpvnstv piaaevfkka gtydekklfg vttldavrak
      181 tfyagkakan vadvnvpvvg ghagitilpl fsqatpkanl peedikaltk rtqdggtevv
      241 eakagkgsat lsmayagaif adaclkglng vpdvvecsfv qstvtelpff askvrlgkng
      301 veevmglgpl sdyeqagles lkpelkasie kgikfanqn
//
LOCUS       XP_016702917             614 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702917
VERSION     XP_016702917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847428.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..614
                     /product="transcription factor GTE4 isoform X1"
                     /calculated_mol_wt=67989
     Region          263..361
                     /region_name="Bromo_plant1"
                     /note="Bromodomain, uncharacterized subfamily specific to
                     plants. Might function as a global transcription factor.
                     Bromodomains are 110 amino acid long domains, that are
                     found in many chromatin associated proteins. Bromodomains
                     can interact specifically with...; cd05506"
                     /db_xref="CDD:99938"
     Site            order(287,294,297,336,340,346)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99938"
     Region          461..523
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     CDS             1..614
                     /gene="LOC107917972"
                     /coded_by="XM_016847428.2:355..2199"
                     /db_xref="GeneID:107917972"
ORIGIN      
        1 matgktegee skndnkvytr kthnkpknps ffphqsseqt lpttttadyh nssrqlppqh
       61 fdavasddss shnqlqrgaq natngtatsg hvrydnlvki nlsvlskndv rvlqrkltre
      121 leqvrgllkk fdakegrfsg gysnsrvlgn edvdrcggsl vrmnsdvgsv glpssrpfhg
      181 lsvsveendr snngngggng sefvekekrt pkanqyykns dfvlgkeklk pvenkkkmkp
      241 nvgknnvrqv gdgvasekls srmfkscsnl lgklmkhkfg wvfnkpvdvk glglhdyysi
      301 vkhpmdlgtv ktrlnknwyk sprefaedvr ltfsnamlyn pkgqdvhvma dtlsglfeek
      361 waaigsesnl nrrfershdy slptptsrri papapapapi qshgppalah sslpleartl
      421 ersesmtmpv dpksrdvdlt psdrigvpkk skikdpekrd mtyeekqrls vdlqnlpsee
      481 ldsivqiikr rnaalfqqed eievdidsvd petlweldrf vtnykkslsk iqknaevalq
      541 anteddhniq etnleppank vskvaetaae rivptsppih gkrqqneesg sssssssssd
      601 sgssssgsds dnss
//
LOCUS       XP_016702918             614 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702918
VERSION     XP_016702918.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847429.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..614
                     /product="transcription factor GTE4 isoform X1"
                     /calculated_mol_wt=67989
     Region          263..361
                     /region_name="Bromo_plant1"
                     /note="Bromodomain, uncharacterized subfamily specific to
                     plants. Might function as a global transcription factor.
                     Bromodomains are 110 amino acid long domains, that are
                     found in many chromatin associated proteins. Bromodomains
                     can interact specifically with...; cd05506"
                     /db_xref="CDD:99938"
     Site            order(287,294,297,336,340,346)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99938"
     Region          461..523
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     CDS             1..614
                     /gene="LOC107917972"
                     /coded_by="XM_016847429.2:357..2201"
                     /db_xref="GeneID:107917972"
ORIGIN      
        1 matgktegee skndnkvytr kthnkpknps ffphqsseqt lpttttadyh nssrqlppqh
       61 fdavasddss shnqlqrgaq natngtatsg hvrydnlvki nlsvlskndv rvlqrkltre
      121 leqvrgllkk fdakegrfsg gysnsrvlgn edvdrcggsl vrmnsdvgsv glpssrpfhg
      181 lsvsveendr snngngggng sefvekekrt pkanqyykns dfvlgkeklk pvenkkkmkp
      241 nvgknnvrqv gdgvasekls srmfkscsnl lgklmkhkfg wvfnkpvdvk glglhdyysi
      301 vkhpmdlgtv ktrlnknwyk sprefaedvr ltfsnamlyn pkgqdvhvma dtlsglfeek
      361 waaigsesnl nrrfershdy slptptsrri papapapapi qshgppalah sslpleartl
      421 ersesmtmpv dpksrdvdlt psdrigvpkk skikdpekrd mtyeekqrls vdlqnlpsee
      481 ldsivqiikr rnaalfqqed eievdidsvd petlweldrf vtnykkslsk iqknaevalq
      541 anteddhniq etnleppank vskvaetaae rivptsppih gkrqqneesg sssssssssd
      601 sgssssgsds dnss
//
LOCUS       XP_016702919             613 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016702919
VERSION     XP_016702919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847430.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..613
                     /product="transcription factor GTE4 isoform X2"
                     /calculated_mol_wt=67918
     Region          263..361
                     /region_name="Bromo_plant1"
                     /note="Bromodomain, uncharacterized subfamily specific to
                     plants. Might function as a global transcription factor.
                     Bromodomains are 110 amino acid long domains, that are
                     found in many chromatin associated proteins. Bromodomains
                     can interact specifically with...; cd05506"
                     /db_xref="CDD:99938"
     Site            order(287,294,297,336,340,346)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99938"
     Region          461..523
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     CDS             1..613
                     /gene="LOC107917972"
                     /coded_by="XM_016847430.2:350..2191"
                     /db_xref="GeneID:107917972"
ORIGIN      
        1 matgktegee skndnkvytr kthnkpknps ffphqsseqt lpttttadyh nssrqlppqh
       61 fdavasddss shnqlqrgaq natngtatsg hvrydnlvki nlsvlskndv rvlqrkltre
      121 leqvrgllkk fdakegrfsg gysnsrvlgn edvdrcggsl vrmnsdvgsv glpssrpfhg
      181 lsvsveendr snngngggng sefvekekrt pkanqyykns dfvlgkeklk pvenkkkmkp
      241 nvgknnvrqv gdgvasekls srmfkscsnl lgklmkhkfg wvfnkpvdvk glglhdyysi
      301 vkhpmdlgtv ktrlnknwyk sprefaedvr ltfsnamlyn pkgqdvhvma dtlsglfeek
      361 waaigsesnl nrrfershdy slptptsrri papapapapi qshgppalah sslpleartl
      421 ersesmtmpv dpksrdvdlt psdrigvpkk skikdpekrd mtyeekqrls vdlqnlpsee
      481 ldsivqiikr rnaalfqqed eievdidsvd petlweldrf vtnykkslsk iqknaevalq
      541 anteddhniq etnleppank vskvaetaer ivptsppihg krqqneesgs ssssssssds
      601 gssssgsdsd nss
//
LOCUS       XP_016702920             613 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016702920
VERSION     XP_016702920.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847431.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..613
                     /product="transcription factor GTE4 isoform X2"
                     /calculated_mol_wt=67918
     Region          263..361
                     /region_name="Bromo_plant1"
                     /note="Bromodomain, uncharacterized subfamily specific to
                     plants. Might function as a global transcription factor.
                     Bromodomains are 110 amino acid long domains, that are
                     found in many chromatin associated proteins. Bromodomains
                     can interact specifically with...; cd05506"
                     /db_xref="CDD:99938"
     Site            order(287,294,297,336,340,346)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99938"
     Region          461..523
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     CDS             1..613
                     /gene="LOC107917972"
                     /coded_by="XM_016847431.2:352..2193"
                     /db_xref="GeneID:107917972"
ORIGIN      
        1 matgktegee skndnkvytr kthnkpknps ffphqsseqt lpttttadyh nssrqlppqh
       61 fdavasddss shnqlqrgaq natngtatsg hvrydnlvki nlsvlskndv rvlqrkltre
      121 leqvrgllkk fdakegrfsg gysnsrvlgn edvdrcggsl vrmnsdvgsv glpssrpfhg
      181 lsvsveendr snngngggng sefvekekrt pkanqyykns dfvlgkeklk pvenkkkmkp
      241 nvgknnvrqv gdgvasekls srmfkscsnl lgklmkhkfg wvfnkpvdvk glglhdyysi
      301 vkhpmdlgtv ktrlnknwyk sprefaedvr ltfsnamlyn pkgqdvhvma dtlsglfeek
      361 waaigsesnl nrrfershdy slptptsrri papapapapi qshgppalah sslpleartl
      421 ersesmtmpv dpksrdvdlt psdrigvpkk skikdpekrd mtyeekqrls vdlqnlpsee
      481 ldsivqiikr rnaalfqqed eievdidsvd petlweldrf vtnykkslsk iqknaevalq
      541 anteddhniq etnleppank vskvaetaer ivptsppihg krqqneesgs ssssssssds
      601 gssssgsdsd nss
//
LOCUS       XP_016702458             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702458
VERSION     XP_016702458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846969.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..127
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13931
     CDS             1..127
                     /gene="LOC107917675"
                     /coded_by="XM_016846969.2:10..393"
                     /db_xref="GeneID:107917675"
ORIGIN      
        1 masfkvlfyl slqvlflvss sgtrlfhpfs tadpalemes kpqykasstd deveityrfe
       61 skqfsgtdql alavagkqhs katiieakrp lieegreaik asiqrnggip feskrlspgg
      121 pdphhhk
//
LOCUS       XP_016702473             454 aa            linear   PLN 06-AUG-2024
DEFINITION  pectate lyase [Gossypium hirsutum].
ACCESSION   XP_016702473
VERSION     XP_016702473.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846984.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..454
                     /product="pectate lyase"
                     /calculated_mol_wt=51903
     Region          25..89
                     /region_name="Pec_lyase_N"
                     /note="Pectate lyase, N terminus; pfam04431"
                     /db_xref="CDD:398232"
     Region          179..372
                     /region_name="Amb_all"
                     /note="Amb_all domain; smart00656"
                     /db_xref="CDD:214765"
     CDS             1..454
                     /gene="LOC107917701"
                     /coded_by="XM_016846984.2:91..1455"
                     /db_xref="GeneID:107917701"
ORIGIN      
        1 mevtkvrfal ffsfaalipg lwaniaefdd fwkqreeeaw nitlatyepn penvtnhfny
       61 nvnkflkets anqtidfedg itnntrrylr gkhkkytgpc matnpidrcw rckknwaknr
      121 krlakcvlgf ghrthggskg kyyvvtdnsd hdvlnpkpgt lrhaviqkrp lwiifartmh
      181 iklsqelivq shktidgrga dvhiaygagf tlqfvhnvii hnihihrivp ssgglirdse
      241 dhfgyrtvgd gdgisifgss niwldhisms echdglidai qgstaitisn chfthhdavm
      301 llgasdsysk dqfmqvtlaf nhfgkellqr mprcrwgffh vvnndythwk myaiggsmhp
      361 tiisqgnrfi aphdpnakev tyrlyasese wknwiwrseg dvllngaifr tsgplspphl
      421 kfnrkemiks kpgayvrrlt rfagtlnckk rikc
//
LOCUS       XP_016701881            1037 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Gossypium hirsutum].
ACCESSION   XP_016701881
VERSION     XP_016701881.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846392.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701881.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1037
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At3g47570"
                     /calculated_mol_wt=113629
     Region          7..1013
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          79..100
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          101..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          149..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          293..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          342..365
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          397..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..518
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          519..541
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          542..565
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          566..589
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          590..613
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          614..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          638..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1037
                     /gene="LOC107917002"
                     /coded_by="XM_016846392.2:83..3196"
                     /db_xref="GeneID:107917002"
ORIGIN      
        1 mgkshfmlsl vvvilflnfv csfsmespni ttdrlallal kshvtsdpkr flatnwstst
       61 svcnwigvtc gsknlrvavl nltgmglvgt ipshlgnlsf lsrlnimnns fqgllpnhla
      121 nlhrlkfinl gnnkfggeip swfgsftrlq nlylfgnnft gsipsslchl pkleflnlgn
      181 nnlrgqipvk ignlstlktl hlgtnqlsgq ipgtigdlln lerlrfsenn ltgpvpssig
      241 nltflsyldf ssnslsgalp fqignlqnle ilslgnnifs gsipppifni stalmiwlgf
      301 nqlsgqlpst aglglpkleg lylelnelsg piptfisnas nliflqltnn sfsgtvpdtf
      361 gnlkylqrld lghnnlsskp sspvlsflss ltsckslevl ifddnpling elpvsvgnls
      421 asltlfyash cnikgsipge ignlsklfwl gldhndftgt ipatlgrlre lqdvdlgsnk
      481 legsipselc hlerlayltl tdnklfgpip eclghmvslr nlflgsnsft sipstltrld
      541 gilflelssn slngslptdi gnwksvtnln lsdnrfsgai pssiadlmhl thlslsgnml
      601 qgsipasfde lisleyldls rnnlsgmipk sleklqnlks fnvsfnrlqg eipsrglfgn
      661 yssqsfigne dlcgpsrlqv ppcktdpsks anllkyilpv igsvilvsiv viillrsrnt
      721 ktelpiqenl pplpewrris yhdlaqatdg fsesnllgvg sfgsvykgtl stgmtiavkv
      781 fhvnqdrafk sfdiecevlr nirhrnlvki isscsnvdfk alvlefmpng slekwlyshn
      841 hflnvlqrln ividialale ylhhghtllv vhcdikpnni lldtdmiahl gdfgiakllg
      901 eedstiqtkt latigymspe ygsegivstk gdvysfgilv metftrkkpt ddifgeemsl
      961 krwvkeslps slvdvvdsel lntreregla akdcilsilq laleclaeva eeridmeevv
     1021 arlkkiktmy lrgteqv
//
LOCUS       XP_016701683             651 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SEEDLING PLASTID DEVELOPMENT 1 [Gossypium hirsutum].
ACCESSION   XP_016701683
VERSION     XP_016701683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..651
                     /product="protein SEEDLING PLASTID DEVELOPMENT 1"
                     /calculated_mol_wt=71916
     Region          72..344
                     /region_name="SpoIIIAA"
                     /note="Stage III sporulation protein SpoIIIAA [Cell cycle
                     control, cell division, chromosome partitioning]; COG3854"
                     /db_xref="CDD:443063"
     Region          549..608
                     /region_name="R3H_AAA"
                     /note="R3H domain of a group of proteins with unknown
                     function, who also contain a AAA-ATPase (AAA) domain. The
                     name of the R3H domain comes from the characteristic
                     spacing of the most conserved arginine and histidine
                     residues. The function of the domain is...; cd02645"
                     /db_xref="CDD:100074"
     Site            order(579,583)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100074"
     CDS             1..651
                     /gene="LOC107916820"
                     /coded_by="XM_016846194.2:128..2083"
                     /db_xref="GeneID:107916820"
ORIGIN      
        1 mfcyslfhhs pplitkwkpq llffkpnfks qfsplnfypn qnfphfftkr isgypikspa
       61 fsssledefd velgrllsll peemrrrire heelreliev vmdigrkpla rfpsgdfvls
      121 dcpitvqdie hatsqvgdfa idnragisrt lhrisairnr kgtiigltcr vgraisgsad
      181 llrdlvqdga sllligppgv gkttiirdia rmlandykkr vmivdtsnei ggdgdiphag
      241 igcarrmqvp dsdmqhkvli eavenhmpqv ivideigtkl eamaactiaq rgiqlvatah
      301 gvtienlimn psleiliggi qsvtlgddea nrrgvqktvl erkgpstfsc gveivsktel
      361 rvhrcleatv davlagrfpr ieirkmnsqg leessqtftd issdkedlvv tgdlsetsde
      421 nsignhfpsd lsskmaddst edrdllhmyv ygiqeasviq glkklkmdaa vqltdnisea
      481 gvlfavlskl rknsgiqaaa kshkipvyva ktsssmqitk alealkddyp yglknpgsen
      541 dmnilekvda leeariaieq vvipkeepve llprptqiis lqteliekyq lqsekigkgs
      601 dvrlrilpfk lvkdedkssg edanandfen fepygangsp hgvdrlpllp d
//
LOCUS       XP_040942829             444 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TCP4 [Gossypium hirsutum].
ACCESSION   XP_040942829
VERSION     XP_040942829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086895.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..444
                     /product="transcription factor TCP4"
                     /calculated_mol_wt=47986
     Region          35..>157
                     /region_name="TCP"
                     /note="TCP family transcription factor; pfam03634"
                     /db_xref="CDD:460998"
     CDS             1..444
                     /gene="LOC107954451"
                     /coded_by="XM_041086895.1:96..1430"
                     /db_xref="GeneID:107954451"
ORIGIN      
        1 mgdshhqaat ssrlgirhsg geivevqggh ivrstgrkdr hskvctakgp rdrrvrlsah
       61 taiqfydvqd rlgydrpska vdwlikkakp aidelaelpp wnpetlnttt siaktsnqed
      121 qnattatdnd kpyqfhtnhs gnlvenlaag sgtrrrtati mgnevqslqq qemgdnpnnn
      181 sgflppslvs deiadtiksf fplgassetp sssiqfqnyp pdllsrtssh sqdlrlslqs
      241 fpepillhhh hhhaqaataq ahhsepvlfs gssplagfdg ssagwehhhq hpaeigrfqr
      301 lfawnnsgaa adssggggag gssgvgggfi fgtpppqsll pafgqnsqlf sqrgplqssn
      361 tplvrawidl pisttdqhqh hhhqqhhhhq ipenihhhta lsgvgfttpg vfsgfrvpar
      421 iqgeedehds ianklssass dshh
//
LOCUS       XP_016745497             285 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016745497
VERSION     XP_016745497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016890008.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="protein IQ-DOMAIN 1 isoform X1"
                     /calculated_mol_wt=32157
     CDS             1..285
                     /gene="LOC107954450"
                     /coded_by="XM_016890008.2:263..1120"
                     /db_xref="GeneID:107954450"
ORIGIN      
        1 mgsgnwlrsf iclkkykpnr skqaktpsiq vhssneksng derveehegp evaaagssqs
       61 spgiaveqra aakiqkafrs yrarkavrrl rdagrfknil iqghtvkkqt tstlsylhsw
      121 cnvqsqirar ricmvtegrl kqkkmenqmk leaklhelev ewcagsetme eilsriqqre
      181 eaavkreram ayafshqwra nasqylgqas ygagkenwgw swierwiaar pwevrihsqp
      241 ihpkkthgrq asksekemkv lasvkpclpn gkvapkakng apsdg
//
LOCUS       XP_016745498             280 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016745498
VERSION     XP_016745498.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016890009.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..280
                     /product="protein IQ-DOMAIN 1 isoform X2"
                     /calculated_mol_wt=31630
     CDS             1..280
                     /gene="LOC107954450"
                     /coded_by="XM_016890009.2:238..1080"
                     /db_xref="GeneID:107954450"
ORIGIN      
        1 mgsgnwlrsf iclkkykpnr skqakvhssn eksngderve ehegpevaaa gssqsspgia
       61 veqraaakiq kafrsyrark avrrlrdagr fkniliqght vkkqttstls ylhswcnvqs
      121 qirarricmv tegrlkqkkm enqmkleakl helevewcag setmeeilsr iqqreeaavk
      181 reramayafs hqwranasqy lgqasygagk enwgwswier wiaarpwevr ihsqpihpkk
      241 thgrqaskse kemkvlasvk pclpngkvap kakngapsdg
//
LOCUS       XP_016727982             390 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727982
VERSION     XP_016727982.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872493.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42309
     CDS             1..390
                     /gene="LOC107939202"
                     /coded_by="XM_016872493.2:296..1468"
                     /db_xref="GeneID:107939202"
ORIGIN      
        1 mapedqtqrc snnsntsggn nniigrsskk qrpkkvpqrg lgvaqlekir leeqqkkdpg
       61 aslilplips fhppnhssss sssssssiad vsppptsffr pqnidgntsa avpltssvng
      121 hkfwgsccef niekgcpgld pgwifrtnls lpyesesiws lpsltqrgqp fhqhqppppm
      181 mnlssrtsss tsvmniqtep psnqkyykky tpllpeeekv igmkrpypfs ldnapgpplh
      241 tkyppivhsi ygqiettsst kdttfnfepd asnfsskegp scstsngvft rdfltlgppa
      301 ttsmcstsks khppsnpisy elpdldslay hqasfgdsim kqggggftqh rpyysffppa
      361 maqiegaktv ttancksgev aghvdlnlkl
//
LOCUS       XP_016727983             390 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727983
VERSION     XP_016727983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872494.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42309
     CDS             1..390
                     /gene="LOC107939202"
                     /coded_by="XM_016872494.2:293..1465"
                     /db_xref="GeneID:107939202"
ORIGIN      
        1 mapedqtqrc snnsntsggn nniigrsskk qrpkkvpqrg lgvaqlekir leeqqkkdpg
       61 aslilplips fhppnhssss sssssssiad vsppptsffr pqnidgntsa avpltssvng
      121 hkfwgsccef niekgcpgld pgwifrtnls lpyesesiws lpsltqrgqp fhqhqppppm
      181 mnlssrtsss tsvmniqtep psnqkyykky tpllpeeekv igmkrpypfs ldnapgpplh
      241 tkyppivhsi ygqiettsst kdttfnfepd asnfsskegp scstsngvft rdfltlgppa
      301 ttsmcstsks khppsnpisy elpdldslay hqasfgdsim kqggggftqh rpyysffppa
      361 maqiegaktv ttancksgev aghvdlnlkl
//
LOCUS       XP_016727981             578 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/calcium exchanger NCL [Gossypium hirsutum].
ACCESSION   XP_016727981
VERSION     XP_016727981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872492.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..578
                     /product="sodium/calcium exchanger NCL"
                     /calculated_mol_wt=63448
     Region          79..>170
                     /region_name="Na_Ca_ex"
                     /note="Sodium/calcium exchanger protein; pfam01699"
                     /db_xref="CDD:426387"
     Region          299..364
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     Region          424..570
                     /region_name="Na_Ca_ex"
                     /note="Sodium/calcium exchanger protein; pfam01699"
                     /db_xref="CDD:426387"
     CDS             1..578
                     /gene="LOC107939201"
                     /coded_by="XM_016872492.2:240..1976"
                     /db_xref="GeneID:107939201"
ORIGIN      
        1 mtskhflflf ffifcfssfp sharfipgrp sptglvsdgi stvknlpyll lkppvsaees
       61 ceqsygflpc tttvlgnmfl iivygylmyl aatylsygse llleilgpgi vgglflpmlg
      121 alpdamlilv sglsgtaeta qsqvsvgmgl lagstvmllt viwgsciivg rcdlhdsvai
      181 dgtntkgfnl kesgvstdiw tcyaarimai svipflivql pqalsstsgr hlavlialii
      241 sllmlisycv yqvfqpwiqr rriafakhkh visgilrhlk khalgrlltd dgepdteiir
      301 klfetmdenh dgglspselr aliigirfee idldqddavs kviadfdtsr dnlvqedefv
      361 egimkwinea kqtggayles nagtfkfidh fhqqtkreha llgseeqsde vvenvenprw
      421 isikavlmll lgtliaaafa dplvdavdnf seatsipsff isfialplat nsseavsaii
      481 fasrkkqrta sltfselyga vtmnnvlcls vflalvyvrg ltwdfssevl vilivcvvmg
      541 afasfrttfp lwtcsvayil ypfslglvyv ldyvfgws
//
LOCUS       XP_016727988             320 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 61 [Gossypium hirsutum].
ACCESSION   XP_016727988
VERSION     XP_016727988.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872499.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..320
                     /product="basic leucine zipper 61"
                     /calculated_mol_wt=35962
     Region          191..241
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          191..241
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(194..195,197..199,201..206,208..210)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(209,212..213,216..217,219..220,223..224,226..227,
                     230..231,233..234,237..238,240..241)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     CDS             1..320
                     /gene="LOC107939205"
                     /coded_by="XM_016872499.2:613..1575"
                     /db_xref="GeneID:107939205"
ORIGIN      
        1 maqlppkipn mtqnwpsfph qrlptmanfi sttantatmn ashhhqpswv defldfssar
       61 rgahrrsisd siafleqplv eecrdsntnh nnnamitetn vfdrlddeql msmfsddvai
      121 tmaaaptlss snpstptsdq nsnndekpvp sldlqqpkne pgevessckp epqaaqppst
      181 sngdpivdpk rvkrilanrq saqrsrvrkl qyiselersv ttlqtevsal sprvafldhq
      241 rlilnvdnsa lkqriaalaq dkifkdahqe alkkeierlr qvyqqqqilk kmnsnnsnnh
      301 happqqqpsq pqqtkkeeql
//
LOCUS       XP_016727980             469 aa            linear   PLN 06-AUG-2024
DEFINITION  homogentisate 1,2-dioxygenase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727980
VERSION     XP_016727980.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727980.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="homogentisate 1,2-dioxygenase isoform X1"
                     /calculated_mol_wt=52194
     Region          23..456
                     /region_name="PLN02658"
                     /note="homogentisate 1,2-dioxygenase"
                     /db_xref="CDD:215355"
     CDS             1..469
                     /gene="LOC107939200"
                     /coded_by="XM_016872491.2:165..1574"
                     /db_xref="GeneID:107939200"
ORIGIN      
        1 mekpatevik gdgwgrfpdd leyhsgfgnh feseviagsl prgqnsplic pfglyaeqis
       61 gtsftsprkl sqrswfyrik psvthepfwp repshkklvs efdgsntvan ptqlrwkpvd
      121 ipdsptdfid glyticgags sflrhgfaih myianksmdn cafcnadgdf lvvpqqgrlw
      181 ittecgrlqv spgeivvlpq gfrfvvdlpd gpsrgyvaev fgthfqlpdl gpiganglaa
      241 srdflaptaw fedcprpgft iiqkfggelf narqdfspfn vvawhgnyvp ykydlskfcp
      301 yntvlidhgd psintvltap tdkpgvalld fvifpprwlv aehtfrppyy hrncmsefmg
      361 liyggyeaka dgflpggasl hscmtphgpd tktyeatvar gneagphkit dtmafmfesc
      421 lmprtcpwal dshfrdldyy qcwiglkshf shdktdvksn dlqngnksg
//
LOCUS       XP_040942830             457 aa            linear   PLN 06-AUG-2024
DEFINITION  homogentisate 1,2-dioxygenase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942830
VERSION     XP_040942830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086896.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..457
                     /product="homogentisate 1,2-dioxygenase isoform X2"
                     /calculated_mol_wt=50918
     Region          23..444
                     /region_name="PLN02658"
                     /note="homogentisate 1,2-dioxygenase"
                     /db_xref="CDD:215355"
     CDS             1..457
                     /gene="LOC107939200"
                     /coded_by="XM_041086896.1:146..1519"
                     /db_xref="GeneID:107939200"
ORIGIN      
        1 mekpatevik gdgwgrfpdd leyhsgfgnh feseviagsl prgqnsplic pfglyaeqis
       61 gtsftsprkl sqrswfyrik psvthepfwp repshkklvs efdgsntvan ptqlrwkpvd
      121 ipdsptdfid glyticgags sflrhgfaih myianksmdn cafcnadgdf lvvpqqgrlw
      181 ittecgrlqv spgeivvlpq gfrfvvdlpd gpsrgyvaev fganglaasr dflaptawfe
      241 dcprpgftii qkfggelfna rqdfspfnvv awhgnyvpyk ydlskfcpyn tvlidhgdps
      301 intvltaptd kpgvalldfv ifpprwlvae htfrppyyhr ncmsefmgli yggyeakadg
      361 flpggaslhs cmtphgpdtk tyeatvargn eagphkitdt mafmfesclm prtcpwalds
      421 hfrdldyyqc wiglkshfsh dktdvksndl qngnksg
//
LOCUS       XP_016727984             216 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein Rab11B [Gossypium hirsutum].
ACCESSION   XP_016727984
VERSION     XP_016727984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872495.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..216
                     /product="ras-related protein Rab11B"
                     /calculated_mol_wt=24092
     Region          11..175
                     /region_name="Rab11_like"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; cd01868"
                     /db_xref="CDD:206660"
     Site            11..15
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206660"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206660"
     Site            order(22..28,39,42,45,71,126..127,129,156..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206660"
     Site            order(28..39,41..44)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206660"
     Site            order(38,43..51)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206660"
     Site            order(43,47..54,61,63)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            45
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206660"
     Site            order(46,48..50,65,67,74..75,78,82,84..87,174)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     Site            order(46..47,49,67..68,75,77,79..81)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            46..50
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206660"
     Site            63..67
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206660"
     Site            68..71
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206660"
     Site            order(71,73..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206660"
     Site            74..79
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206660"
     Site            82..86
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206660"
     Site            91..96
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206660"
     Site            119..123
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206660"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206660"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206660"
     Site            172..175
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206660"
     CDS             1..216
                     /gene="LOC107939203"
                     /coded_by="XM_016872495.2:268..918"
                     /db_xref="GeneID:107939203"
ORIGIN      
        1 maayradddy dylfklvlig dsgvgksnll srftknefnl eskstigvef atrsirvddk
       61 vvkaqiwdta gqeryraits ayyrgavgal lvydvtrhit fenverwlke lrdhtdsniv
      121 imlvgnkadl rhlravstee akafaerekt yfmetsales lnvenaftev ltriyhvvsr
      181 kalevgddpa alpkgqtinv gkddvsalkk igccsa
//
LOCUS       XP_016727947             253 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase mitochondrial F1 complex assembly factor 1 [Gossypium
            hirsutum].
ACCESSION   XP_016727947
VERSION     XP_016727947.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872458.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..253
                     /product="ATP synthase mitochondrial F1 complex assembly
                     factor 1"
                     /calculated_mol_wt=28945
     Region          <81..245
                     /region_name="ATP11"
                     /note="ATP11 protein; pfam06644"
                     /db_xref="CDD:461972"
     CDS             1..253
                     /gene="LOC107939176"
                     /coded_by="XM_016872458.2:292..1053"
                     /db_xref="GeneID:107939176"
ORIGIN      
        1 mqrlasritv takvssslrt iilketpsss swlsircfsa fssqqrvtek eaipgdllkw
       61 gslgfcrtsr fasgfkplep kpldsimdln rsknrspedl asiwddyhlg rghigltmka
      121 klyrlleqrg sdcryfvvpl wrgsgyttmf gqvqlpymlf tgledykarg tqaspyftas
      181 fytefaeskd lvlirgdivf tskltdeeak wllettqsfy lndvryklve cfnkeprdfe
      241 fkdvlraldm pil
//
LOCUS       XP_040942831             253 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase mitochondrial F1 complex assembly factor 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942831
VERSION     XP_040942831.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086897.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..253
                     /product="ATP synthase mitochondrial F1 complex assembly
                     factor 1"
                     /calculated_mol_wt=28945
     Region          <81..245
                     /region_name="ATP11"
                     /note="ATP11 protein; pfam06644"
                     /db_xref="CDD:461972"
     CDS             1..253
                     /gene="LOC107939176"
                     /coded_by="XM_041086897.1:325..1086"
                     /db_xref="GeneID:107939176"
ORIGIN      
        1 mqrlasritv takvssslrt iilketpsss swlsircfsa fssqqrvtek eaipgdllkw
       61 gslgfcrtsr fasgfkplep kpldsimdln rsknrspedl asiwddyhlg rghigltmka
      121 klyrlleqrg sdcryfvvpl wrgsgyttmf gqvqlpymlf tgledykarg tqaspyftas
      181 fytefaeskd lvlirgdivf tskltdeeak wllettqsfy lndvryklve cfnkeprdfe
      241 fkdvlraldm pil
//
LOCUS       XP_040942832             456 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 79B6 [Gossypium hirsutum].
ACCESSION   XP_040942832
VERSION     XP_040942832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086898.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..456
                     /product="UDP-glycosyltransferase 79B6"
                     /calculated_mol_wt=50825
     Region          8..453
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,178,181..182,186,210,274,350,352,354..355,
                     358)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,274,350,352,354..355)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..456
                     /gene="LOC107939192"
                     /coded_by="XM_041086898.1:179..1549"
                     /db_xref="GeneID:107939192"
ORIGIN      
        1 msksgcsklh iamfpwvayg hfipflhlsn klahkghkis filpkgvqpk lenmnqypnl
       61 iqfvplviph vdglppgaet tsviplnqqk ylafavdqtr dqvegilgal kpdmvfydfw
      121 fwipdlarql gihsicyvvv ssmimslgsn irtitkettv eevaklppdy psstvkfkae
      181 eaaallfean dfgsglsfge rtrtavsgsd aiafrtcret egpfcdyfar gigksvlltg
      241 pclpetntqq ldekwvswls qfepgsvvfc sfgsqsvlqk defqelvlgf elcglpflva
      301 lkppqgfstv eealpegfqd rvggrglvyg gwvpqeqllh hpnigcfvnh cgygtmwefl
      361 lsdcqivlip eigdqilntr lmvkelkigv evergknrev skeslseaik fvmdkdneta
      421 nmmkrnhanl kqilsnrdlq egyinnfiqa lqdlvk
//
LOCUS       XP_016727971             456 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 79B6 [Gossypium hirsutum].
ACCESSION   XP_016727971
VERSION     XP_016727971.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727971.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..456
                     /product="UDP-glycosyltransferase 79B6"
                     /calculated_mol_wt=50825
     Region          8..453
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,178,181..182,186,210,274,350,352,354..355,
                     358)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,274,350,352,354..355)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..456
                     /gene="LOC107939192"
                     /coded_by="XM_016872482.2:179..1549"
                     /db_xref="GeneID:107939192"
ORIGIN      
        1 msksgcsklh iamfpwvayg hfipflhlsn klahkghkis filpkgvqpk lenmnqypnl
       61 iqfvplviph vdglppgaet tsviplnqqk ylafavdqtr dqvegilgal kpdmvfydfw
      121 fwipdlarql gihsicyvvv ssmimslgsn irtitkettv eevaklppdy psstvkfkae
      181 eaaallfean dfgsglsfge rtrtavsgsd aiafrtcret egpfcdyfar gigksvlltg
      241 pclpetntqq ldekwvswls qfepgsvvfc sfgsqsvlqk defqelvlgf elcglpflva
      301 lkppqgfstv eealpegfqd rvggrglvyg gwvpqeqllh hpnigcfvnh cgygtmwefl
      361 lsdcqivlip eigdqilntr lmvkelkigv evergknrev skeslseaik fvmdkdneta
      421 nmmkrnhanl kqilsnrdlq egyinnfiqa lqdlvk
//
LOCUS       XP_016734124             273 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LEO1 homolog [Gossypium hirsutum].
ACCESSION   XP_016734124
VERSION     XP_016734124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878635.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..273
                     /product="protein LEO1 homolog"
                     /calculated_mol_wt=31165
     Region          <37..248
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          227..>273
                     /region_name="Leo1"
                     /note="Leo1-like protein; pfam04004"
                     /db_xref="CDD:461126"
     CDS             1..273
                     /gene="LOC107944810"
                     /coded_by="XM_016878635.2:240..1061"
                     /db_xref="GeneID:107944810"
ORIGIN      
        1 mgeekrhemm qnlfgdqsee eeeidsehes nphpnyayde aegvmepege veveghgeae
       61 vesdgdlrdl eldpgesege rvqssqevdi gdqreeseak etdsdekedy gqrvvtsrrr
      121 eviesgsers eenhypdned eevdqtrsls kspeeekdpt hlshsaaeir dvfgasdeee
      181 eeaeyavrhd meqeeirspm eeegsygksp rledmvhded aryesddehv evkqkekpvg
      241 pplelevpfr papahptkye snarfvrwsd gsl
//
LOCUS       XP_016727973             520 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ZFP1 [Gossypium hirsutum].
ACCESSION   XP_016727973
VERSION     XP_016727973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872484.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="probable E3 ubiquitin-protein ligase ZFP1"
                     /calculated_mol_wt=57494
     Region          473..518
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(473,476,491,493,496,499,510,513)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..520
                     /gene="LOC107939195"
                     /coded_by="XM_016872484.2:188..1750"
                     /db_xref="GeneID:107939195"
ORIGIN      
        1 mgqrnmrspi dleidqqgqe ylqhepcvyl ggttnypspd ipmtvtapgn ttnldahplp
       61 ehydnsmfyg ipmylgvqhh hhspnldlgi gsasnfygpy vptpsssvpi nhgipdqmps
      121 ssnyrihgvs adeyarnchf mdnvrglykr knsegipgnf qqfnasssss ssvtplntrn
      181 pdgvgtvdaa sftrsqyrgn glppireagp qrsvrnrlga navdpvlmqs gnpyfqgnyl
      241 gqpfqptitd ggasawtqap gvpymhgsni ggpmetrhrs ssnfshspld frnpnfhhhv
      301 ppiegarghg invhpqvapv pycfpasyas qstmnpsqdg ldvgrrhfgp vpptgfriyh
      361 srresgalpe ssqrhrnlph lrvlppdgva vlefpefyee vgnlidhhrd mrldiedmsy
      421 eellalgeri gnvntglsee imrrklktrs ystfatninl eeaapveqep dfcticqedy
      481 knqekigtld cgheyhascl rkwllvknvc picksealat
//
LOCUS       XP_016727972             520 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ZFP1 [Gossypium hirsutum].
ACCESSION   XP_016727972
VERSION     XP_016727972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872483.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="probable E3 ubiquitin-protein ligase ZFP1"
                     /calculated_mol_wt=57494
     Region          473..518
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(473,476,491,493,496,499,510,513)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..520
                     /gene="LOC107939195"
                     /coded_by="XM_016872483.2:264..1826"
                     /db_xref="GeneID:107939195"
ORIGIN      
        1 mgqrnmrspi dleidqqgqe ylqhepcvyl ggttnypspd ipmtvtapgn ttnldahplp
       61 ehydnsmfyg ipmylgvqhh hhspnldlgi gsasnfygpy vptpsssvpi nhgipdqmps
      121 ssnyrihgvs adeyarnchf mdnvrglykr knsegipgnf qqfnasssss ssvtplntrn
      181 pdgvgtvdaa sftrsqyrgn glppireagp qrsvrnrlga navdpvlmqs gnpyfqgnyl
      241 gqpfqptitd ggasawtqap gvpymhgsni ggpmetrhrs ssnfshspld frnpnfhhhv
      301 ppiegarghg invhpqvapv pycfpasyas qstmnpsqdg ldvgrrhfgp vpptgfriyh
      361 srresgalpe ssqrhrnlph lrvlppdgva vlefpefyee vgnlidhhrd mrldiedmsy
      421 eellalgeri gnvntglsee imrrklktrs ystfatninl eeaapveqep dfcticqedy
      481 knqekigtld cgheyhascl rkwllvknvc picksealat
//
LOCUS       XP_016727974             472 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 79B2 [Gossypium hirsutum].
ACCESSION   XP_016727974
VERSION     XP_016727974.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872485.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..472
                     /product="UDP-glycosyltransferase 79B2"
                     /calculated_mol_wt=52839
     Region          8..453
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,173,176..177,181,210,274,350,352,354..355,
                     358)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,274,350,352,354..355)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..472
                     /gene="LOC107939197"
                     /coded_by="XM_016872485.2:253..1671"
                     /db_xref="GeneID:107939197"
ORIGIN      
        1 mgksgysklh iamfpwvayg hfipflhlsn klahkghkis filpkgvqpk lenmnqypnl
       61 iqfvplviph vdglppgaet tsvvplnqqk ylafavdqtr dqvegilgal kpdmvfydfw
      121 fwipdlarql gihpifyvvv ssmimslgsn irtltkemtv eevtklppdy psstvkfkae
      181 eaaallfeae dfgsglsfge rirtavsgsd aiafrtcret egpfcdyvar gygkpvllsg
      241 pclpetktqq ldekwvswls qfepgsvvfc slgsqsvlqk defqelllgf elcglpflla
      301 lkppqgcstv eealpegfqd rvggrglvyg gwvpqeqllh hpnigcfvnh cgygtmwefl
      361 lsdcqvvlip eigdqilntr lmanelkigv evergknrev pkeslseaik lvmdkdneta
      421 nmmkrnhakl kqmlsnrdlq egyinnfiqa lqdlsnrksk lqnkmnkpdd vw
//
LOCUS       XP_016727951             159 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727951
VERSION     XP_016727951.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727951.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="28 kDa heat- and acid-stable phosphoprotein
                     isoform X1"
                     /calculated_mol_wt=18429
     Region          69..148
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..159
                     /gene="LOC107939180"
                     /coded_by="XM_016872462.2:124..603"
                     /db_xref="GeneID:107939180"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe ellagssarp rtfkkeeaev eeeeerseee veeepekrkg
       61 tqglieienp nlakpknvka kakdlvmgkt telsrreree iekqkahery mklqeqgkte
      121 qarkdlerla lirkqraeaa kkreeekavr eqkkveark
//
LOCUS       XP_016727952             159 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727952
VERSION     XP_016727952.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872463.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727952.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="28 kDa heat- and acid-stable phosphoprotein
                     isoform X1"
                     /calculated_mol_wt=18429
     Region          69..148
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..159
                     /gene="LOC107939180"
                     /coded_by="XM_016872463.2:124..603"
                     /db_xref="GeneID:107939180"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe ellagssarp rtfkkeeaev eeeeerseee veeepekrkg
       61 tqglieienp nlakpknvka kakdlvmgkt telsrreree iekqkahery mklqeqgkte
      121 qarkdlerla lirkqraeaa kkreeekavr eqkkveark
//
LOCUS       XP_016727953             159 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727953
VERSION     XP_016727953.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872464.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727953.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="28 kDa heat- and acid-stable phosphoprotein
                     isoform X1"
                     /calculated_mol_wt=18429
     Region          69..148
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..159
                     /gene="LOC107939180"
                     /coded_by="XM_016872464.2:124..603"
                     /db_xref="GeneID:107939180"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe ellagssarp rtfkkeeaev eeeeerseee veeepekrkg
       61 tqglieienp nlakpknvka kakdlvmgkt telsrreree iekqkahery mklqeqgkte
      121 qarkdlerla lirkqraeaa kkreeekavr eqkkveark
//
LOCUS       XP_016727954             159 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727954
VERSION     XP_016727954.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727954.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="28 kDa heat- and acid-stable phosphoprotein
                     isoform X1"
                     /calculated_mol_wt=18429
     Region          69..148
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..159
                     /gene="LOC107939180"
                     /coded_by="XM_016872465.2:124..603"
                     /db_xref="GeneID:107939180"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe ellagssarp rtfkkeeaev eeeeerseee veeepekrkg
       61 tqglieienp nlakpknvka kakdlvmgkt telsrreree iekqkahery mklqeqgkte
      121 qarkdlerla lirkqraeaa kkreeekavr eqkkveark
//
LOCUS       XP_016727955             159 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727955
VERSION     XP_016727955.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872466.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727955.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="28 kDa heat- and acid-stable phosphoprotein
                     isoform X1"
                     /calculated_mol_wt=18429
     Region          69..148
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..159
                     /gene="LOC107939180"
                     /coded_by="XM_016872466.2:124..603"
                     /db_xref="GeneID:107939180"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe ellagssarp rtfkkeeaev eeeeerseee veeepekrkg
       61 tqglieienp nlakpknvka kakdlvmgkt telsrreree iekqkahery mklqeqgkte
      121 qarkdlerla lirkqraeaa kkreeekavr eqkkveark
//
LOCUS       XP_016727956             157 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa heat- and acid-stable phosphoprotein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016727956
VERSION     XP_016727956.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872467.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727956.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="28 kDa heat- and acid-stable phosphoprotein
                     isoform X2"
                     /calculated_mol_wt=18171
     Region          67..146
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..157
                     /gene="LOC107939180"
                     /coded_by="XM_016872467.2:123..596"
                     /db_xref="GeneID:107939180"
ORIGIN      
        1 mgrgkfkgkp tghrhfstpe ellagssarp rtfkkaevee eeerseeeve eepekrkgtq
       61 glieienpnl akpknvkaka kdlvmgktte lsrrereeie kqkaherymk lqeqgkteqa
      121 rkdlerlali rkqraeaakk reeekavreq kkveark
//
LOCUS       XP_016727957              88 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription elongation factor 1 homolog [Gossypium hirsutum].
ACCESSION   XP_016727957
VERSION     XP_016727957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872468.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..88
                     /product="transcription elongation factor 1 homolog"
                     /calculated_mol_wt=9939
     Region          2..79
                     /region_name="Elf1"
                     /note="Transcription elongation factor Elf1 like;
                     pfam05129"
                     /db_xref="CDD:461556"
     CDS             1..88
                     /gene="LOC107939181"
                     /coded_by="XM_016872468.2:346..612"
                     /db_xref="GeneID:107939181"
ORIGIN      
        1 mgkrksrakp ppkkrmdkld tvfscpfcnh gtgvecrldm knligeaicr icqesfctti
       61 taltepidiy sewidecekv nnfedhda
//
LOCUS       XP_016727959              88 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription elongation factor 1 homolog [Gossypium hirsutum].
ACCESSION   XP_016727959
VERSION     XP_016727959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..88
                     /product="transcription elongation factor 1 homolog"
                     /calculated_mol_wt=9939
     Region          2..79
                     /region_name="Elf1"
                     /note="Transcription elongation factor Elf1 like;
                     pfam05129"
                     /db_xref="CDD:461556"
     CDS             1..88
                     /gene="LOC107939181"
                     /coded_by="XM_016872470.2:208..474"
                     /db_xref="GeneID:107939181"
ORIGIN      
        1 mgkrksrakp ppkkrmdkld tvfscpfcnh gtgvecrldm knligeaicr icqesfctti
       61 taltepidiy sewidecekv nnfedhda
//
LOCUS       XP_016727958              88 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription elongation factor 1 homolog [Gossypium hirsutum].
ACCESSION   XP_016727958
VERSION     XP_016727958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..88
                     /product="transcription elongation factor 1 homolog"
                     /calculated_mol_wt=9939
     Region          2..79
                     /region_name="Elf1"
                     /note="Transcription elongation factor Elf1 like;
                     pfam05129"
                     /db_xref="CDD:461556"
     CDS             1..88
                     /gene="LOC107939181"
                     /coded_by="XM_016872469.2:238..504"
                     /db_xref="GeneID:107939181"
ORIGIN      
        1 mgkrksrakp ppkkrmdkld tvfscpfcnh gtgvecrldm knligeaicr icqesfctti
       61 taltepidiy sewidecekv nnfedhda
//
LOCUS       XP_016727960              88 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription elongation factor 1 homolog [Gossypium hirsutum].
ACCESSION   XP_016727960
VERSION     XP_016727960.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872471.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..88
                     /product="transcription elongation factor 1 homolog"
                     /calculated_mol_wt=9939
     Region          2..79
                     /region_name="Elf1"
                     /note="Transcription elongation factor Elf1 like;
                     pfam05129"
                     /db_xref="CDD:461556"
     CDS             1..88
                     /gene="LOC107939181"
                     /coded_by="XM_016872471.2:103..369"
                     /db_xref="GeneID:107939181"
ORIGIN      
        1 mgkrksrakp ppkkrmdkld tvfscpfcnh gtgvecrldm knligeaicr icqesfctti
       61 taltepidiy sewidecekv nnfedhda
//
LOCUS       XP_040942834             354 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SAWADEE HOMEODOMAIN HOMOLOG 2 [Gossypium hirsutum].
ACCESSION   XP_040942834
VERSION     XP_040942834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086900.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..354
                     /product="protein SAWADEE HOMEODOMAIN HOMOLOG 2"
                     /calculated_mol_wt=39807
     Region          13..75
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(13,65,68..69,72)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          136..264
                     /region_name="SAWADEE"
                     /note="SAWADEE domain; pfam16719"
                     /db_xref="CDD:465246"
     CDS             1..354
                     /gene="LOC107939178"
                     /coded_by="XM_041086900.1:203..1267"
                     /db_xref="GeneID:107939178"
ORIGIN      
        1 mgrppsnggp afrftqteva dmetvlqehh nqmpareile slaekfsest erkgrtivqf
       61 kqvwnwfqnr ryairakssk vpgklnvtsm prddsnpvrn vlqpvaapmp ppmaapmstt
      121 mpattvpvat rhmsesfmef eakssrdgaw ydvatflahr ymetgdpevq vrfagfgpee
      181 dewvkvrkhl rqrslpceas ecvavlpgdl ilcfqegkdq alyfdahvld aqrrrhdvrg
      241 crcrflvryd hdqseeivpl rkvcrrpetd yrlqqlhass nteqkpstnp ptattpaetm
      301 qkqwnrdvlr tpapvgvsha nvssiaaqta kpesksaaft ttiatstpaq nmqe
//
LOCUS       XP_016727986             366 aa            linear   PLN 06-AUG-2024
DEFINITION  reticulon-4-interacting protein 1 homolog, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016727986
VERSION     XP_016727986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872497.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..366
                     /product="reticulon-4-interacting protein 1 homolog,
                     mitochondrial"
                     /calculated_mol_wt=39378
     Region          32..362
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(71..73,76,159,163,184..187,189..190,208..209,212,
                     227,246..247,269..270,311..313)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
     CDS             1..366
                     /gene="LOC107939204"
                     /coded_by="XM_016872497.2:188..1288"
                     /db_xref="GeneID:107939204"
ORIGIN      
        1 mavlklqslk prpiselsmk vgsircyvss cravllprfg gpevlqlrpd vpvpdlkpne
       61 vlvraravsi npldtrmrsg ygrsifepll plilgrdvsg evaavgasvk sltvgqevfg
      121 alhptalrgt ytdyailted elspkpaslt hveasaipfa altawralks taritegqrl
      181 lvvggggavg fsaiqiavaa gchvtttcgn qsinrliaag aeqavdytse diesvikekf
      241 davldtigvp eteriginll nrgghymtlq geaaalsdry glpiglpaat avlfkkriry
      301 kfshgieysw iymradsegl heirrlseag klsipvektf sitqvreahe akdkkqilgk
      361 vvleld
//
LOCUS       XP_016727987             366 aa            linear   PLN 06-AUG-2024
DEFINITION  reticulon-4-interacting protein 1 homolog, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016727987
VERSION     XP_016727987.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..366
                     /product="reticulon-4-interacting protein 1 homolog,
                     mitochondrial"
                     /calculated_mol_wt=39378
     Region          32..362
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(71..73,76,159,163,184..187,189..190,208..209,212,
                     227,246..247,269..270,311..313)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
     CDS             1..366
                     /gene="LOC107939204"
                     /coded_by="XM_016872498.2:179..1279"
                     /db_xref="GeneID:107939204"
ORIGIN      
        1 mavlklqslk prpiselsmk vgsircyvss cravllprfg gpevlqlrpd vpvpdlkpne
       61 vlvraravsi npldtrmrsg ygrsifepll plilgrdvsg evaavgasvk sltvgqevfg
      121 alhptalrgt ytdyailted elspkpaslt hveasaipfa altawralks taritegqrl
      181 lvvggggavg fsaiqiavaa gchvtttcgn qsinrliaag aeqavdytse diesvikekf
      241 davldtigvp eteriginll nrgghymtlq geaaalsdry glpiglpaat avlfkkriry
      301 kfshgieysw iymradsegl heirrlseag klsipvektf sitqvreahe akdkkqilgk
      361 vvleld
//
LOCUS       XP_016727970            1184 aa            linear   PLN 06-AUG-2024
DEFINITION  carbamoyl-phosphate synthase large chain, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016727970
VERSION     XP_016727970.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872481.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727970.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1184
                     /product="carbamoyl-phosphate synthase large chain,
                     chloroplastic"
                     /calculated_mol_wt=129606
     Region          71..1165
                     /region_name="PLN02735"
                     /note="carbamoyl-phosphate synthase"
                     /db_xref="CDD:215391"
     CDS             1..1184
                     /gene="LOC107939191"
                     /coded_by="XM_016872481.2:149..3703"
                     /db_xref="GeneID:107939191"
ORIGIN      
        1 msccksfsss rfssfskpfl pksfnlpplf fisssnpkpn rssfhlrswp sqrhlspmaa
       61 krvsiqansn asaeekgpkq gkrtdlkkim ilgagpivig qacefdysgt qackalreeg
      121 yevvlinsnp atimtdpdma nrtyvtpmtp elveqvleke rpdallptmg gqtalnlava
      181 laesgvleky sveligakld aikkaedrdl fkqamktigi ktppsgignt ldecieiane
      241 igefpliirp aftlggtggg iaynkeefes ickaglaasl tsqvlveksl lgwkeyelev
      301 mrdladnvvi icsienidpm gvhtgdsitv apaqtltdke yqrlrdysvk iireigvecg
      361 gsnvqfavnp vdgevmviem nprvsrssal askatgfpia kmaaklsvgy tldqipndit
      421 kktpasfeps idyvvtkipr fafekfpgsp pilttqmksv gesmalgrtf qesfqkavrs
      481 lecgysgwgc aevkelnwdw dqlkyslrvp spdrihsvya amkkgmkvde iyelsfidkw
      541 fltqlkelid veqyllsrgl sdltkeefye vkkrgfsdkq iafatkssee evrnkrvslg
      601 vipaykrvdt caaefeantp ymyssydfec esaptekkkv lilgggpnri gqgiefdycc
      661 chtsfalqka gfetimmnsn petvstdydt sdrlyfeplt vedvlnviel erpdgiivqf
      721 ggqtplklsl piqryldkhr pacasgagqv riwgtspdsi daaedrerfn ailkelkieq
      781 pkggiaksee dalaiateig ypvvvrpsyv lggrameivy nddklvtyle navevdperp
      841 vlidkylsda veidvdalad lhgnvviggi mehieqagvh sgdsacsipt qtipsscldt
      901 irswttklan rlnvcglmnc qyaitasgdv flleanpras rtvpfvskai ghplakyaal
      961 vmsgkslydl dftkevtpkh vsvkeavlpf ekfqgcdvll gpemkstgev mgidfefaia
     1021 fakaqiaagq klplsgtvfl slndltkpyl eriakaflgl gfhiistsgt ahflelkgip
     1081 vervlkmheg rphagdmian gqiqlmvits sgdaldqidg rqlrrmalay kvpiittvdg
     1141 alasaeairs lksctinmia lqdffntetg agqsknllst sssl
//
LOCUS       XP_016727950             279 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727950
VERSION     XP_016727950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30143
     Region          154..232
                     /region_name="DUF3082"
                     /note="Protein of unknown function (DUF3082); pfam11282"
                     /db_xref="CDD:431781"
     CDS             1..279
                     /gene="LOC107939179"
                     /coded_by="XM_016872461.2:288..1127"
                     /db_xref="GeneID:107939179"
ORIGIN      
        1 mlpsfhllas psllslpplh npsysplfll rkptflsahs kphlgpflah aqgpittiae
       61 tqeeeegpfe lppsststsi fatnddptpl qtatsvlltg aigvflfrsl rrrakrakel
      121 rlrssdtkks lkeealdnlk aissasidtk sstpsavqal lgsiaagvit lilykfttti
      181 easlnrqtvs dnfsvrqiti tirtivnglc ylatfvfgin slglflysgq lalnsfmdgs
      241 sskenesksq envgsvkedv aegmeltsrr edqspddkq
//
LOCUS       XP_016727963             309 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727963
VERSION     XP_016727963.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872474.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727963.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..309
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34637
     CDS             1..309
                     /gene="LOC107939184"
                     /coded_by="XM_016872474.2:131..1060"
                     /db_xref="GeneID:107939184"
ORIGIN      
        1 meetealdll eeswffenll drrrrmsrcy sdpctssnfr qdvlsndscn nnqssnglvr
       61 apslppcigr geqveakknh ggkiklnrql slqaskttss tttttcsdhk tktpdressl
      121 srhslqrtps lpssmeakvs dirmsklirq aladspdilp prhnhnkatn lprcsirppr
      181 nqeveainnt neasvtryrh snpkkmlqks ysdlafqelq gfkdlgftfd kedlspdivn
      241 ilpglqgdki edelqpdkvk kpylseawlv qgpappsipt cvsknsakdm kaqikfwara
      301 vatnvrqec
//
LOCUS       XP_016727975             458 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: UDP-glycosyltransferase 79B6-like [Gossypium
            hirsutum].
ACCESSION   XP_016727975
VERSION     XP_016727975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872486.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..458
                     /product="LOW QUALITY PROTEIN: UDP-glycosyltransferase
                     79B6-like"
                     /calculated_mol_wt=51159
     Region          7..457
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,164,167..168,172,202,277,353,355,357..358,
                     361)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,277,353,355,357..358)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..458
                     /gene="LOC107939198"
                     /coded_by="XM_016872486.2:161..1537"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:107939198"
ORIGIN      
        1 maetdssefr ilmfpwfafg hmtpylhlan klaqkgyrit fatpqkainr lrhlnlfpdf
       61 isfhvitvps vtglppgaet asdvpiflth flaialdltr dqleslvtsi kpkfiiydaa
      121 ywipevakpl giktinfnvv saasiaivlv parnvpkdrp itmeelatpp pgypstsvvl
      181 rgteletllf vtnpfgeemt fyeritlsmk ncdvisirtc yevegklcdy issqyqkqvl
      241 ltgpvlpeds ksslderwsn wlagfepgsv vfcafgsqli lemaqfrelv lafeltglpf
      301 fialkpplga ekveealpeg feervkgrgv vygawvqqpl vlahpsvgcf vshcgfgsmw
      361 esllsdcqiv lvphlgdqil ntrllademk vavevkkeen gwiskenlse aiksvmdkes
      421 evgklvmenh kkwrevinpn lmngyidkfl qgmrqpvs
//
LOCUS       XP_016727977             351 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase ANS isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016727977
VERSION     XP_016727977.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872488.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..351
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     ANS isoform X1"
                     /calculated_mol_wt=39045
     Region          <45..105
                     /region_name="PLN03176"
                     /note="flavanone-3-hydroxylase; Provisional"
                     /db_xref="CDD:178720"
     Region          86..347
                     /region_name="PLN03001"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:166642"
     CDS             1..351
                     /gene="LOC107939199"
                     /coded_by="XM_016872488.2:150..1205"
                     /db_xref="GeneID:107939199"
ORIGIN      
        1 megavrvqil sqmgisevps qyiqppknrp gsvteniadl sckhvpavdl ssekesvlpa
       61 ireacrdwga fhvinhgvpt kllddlrrac fsffndfpme dklkyacnpn faasegygsr
      121 llvssenetv ldwrdyfdhh tlplsrrnps awphfppeyr elmanysdem kalvqrllal
      181 mseslglkas ciedavgefy qnitasyypp cprpdltlgl qshsdigait lliqdnvggl
      241 qvlkdgewll vdplpnailv lvadqteiit ngqyktcvhr avtnaskarl siatfhdpak
      301 tvrispvsdl vsksspplys svlyryylss wysnapegkr nldkllldts k
//
LOCUS       XP_016727978             322 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase ANS isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016727978
VERSION     XP_016727978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872489.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..322
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     ANS isoform X2"
                     /calculated_mol_wt=35745
     Region          <45..105
                     /region_name="PLN03176"
                     /note="flavanone-3-hydroxylase; Provisional"
                     /db_xref="CDD:178720"
     Region          86..310
                     /region_name="PLN03001"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:166642"
     CDS             1..322
                     /gene="LOC107939199"
                     /coded_by="XM_016872489.2:150..1118"
                     /db_xref="GeneID:107939199"
ORIGIN      
        1 megavrvqil sqmgisevps qyiqppknrp gsvteniadl sckhvpavdl ssekesvlpa
       61 ireacrdwga fhvinhgvpt kllddlrrac fsffndfpme dklkyacnpn faasegygsr
      121 llvssenetv ldwrdyfdhh tlplsrrnps awphfppeyr elmanysdem kalvqrllal
      181 mseslglkas ciedavgefy qnitasyypp cprpdltlgl qshsdigait lliqdnvggl
      241 qvlkdgewll vdplpnailv lvadqteiit ngqyktcvhr avtnaskarl siatfhdpak
      301 tvrispvsdl llfctvcnke ee
//
LOCUS       XP_016727979             318 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase ANS isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016727979
VERSION     XP_016727979.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872490.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..318
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     ANS isoform X3"
                     /calculated_mol_wt=35225
     Region          <45..105
                     /region_name="PLN03176"
                     /note="flavanone-3-hydroxylase; Provisional"
                     /db_xref="CDD:178720"
     Region          86..310
                     /region_name="PLN03001"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:166642"
     CDS             1..318
                     /gene="LOC107939199"
                     /coded_by="XM_016872490.2:117..1073"
                     /db_xref="GeneID:107939199"
ORIGIN      
        1 megavrvqil sqmgisevps qyiqppknrp gsvteniadl sckhvpavdl ssekesvlpa
       61 ireacrdwga fhvinhgvpt kllddlrrac fsffndfpme dklkyacnpn faasegygsr
      121 llvssenetv ldwrdyfdhh tlplsrrnps awphfppeyr elmanysdem kalvqrllal
      181 mseslglkas ciedavgefy qnitasyypp cprpdltlgl qshsdigait lliqdnvggl
      241 qvlkdgewll vdplpnailv lvadqteiit ngqyktcvhr avtnaskarl siatfhdpak
      301 tvrispvsdl lqkhggir
//
LOCUS       XP_016727965            1933 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727965
VERSION     XP_016727965.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872476.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727965.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1933
                     /product="uncharacterized protein"
                     /calculated_mol_wt=213680
     Region          425..529
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(483,493..496,502,521)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          620..789
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(665..667,688,690..691,724..725)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     Region          817..>848
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     CDS             1..1933
                     /gene="LOC107939188"
                     /coded_by="XM_016872476.2:407..6208"
                     /db_xref="GeneID:107939188"
ORIGIN      
        1 mqlsptsvss skrsdfrrks gsrlrqkhkr ldaiceeeyn rnhgegnkrd dvdgsgsadf
       61 elrrssrvrk aplildvspp pprrrqkirk nerfvrggrn lgsvkqeeee etitealtlg
      121 swrsrlrtrr knvnakvkve ervlsrrklf ediggneded eeeeeeeelg esdggemval
      181 ksrrlgsiea ssgsqseekv eicgmeeete lekeeikgdg vveaapvles ktnpgnnrgd
      241 evvegpvvle semshgngki idgnadevdk ddrevsncmq seecigheil evtgaierve
      301 lteeqvqqle clseganeed avevdngpee vedvglhdak edglvngdkk hsefknhmkv
      361 eksnqaaaym igksrikqgr rcglcgggtd gkppkklvhd agdseneays tsaseepdyd
      421 iwdgfgdepg wlgrllgpin drygiagiwv hqqcavwspe vyfaglgclk kvraalcrgr
      481 alkcsrcgrp gatigcrvdr cpktyhlpca rangcifdhr kfliactdhr ylfqphgiky
      541 laqikkmkak kmklemrkls ndawrkdiea eekwlehcge deeflkregk rlhrdllrla
      601 pvyiggsese ngksfegwes vaglhdviqc mkevvilpll ypeffdnlgl tpprgvllhg
      661 ypgtgktlvv raligscarg dkriayfark gadclgkyvg daerqlrllf qvaercqpsi
      721 iffdeidgla prrtrqqdqt hssvvstlla lldglksrgs vvvigatnrp davdpalrrp
      781 grfdreiyfp lpsmedraai lelhtkrwpk pvtgsllkwv arktvgfaga dlqalctqaa
      841 vislkrnfpl qeilstaeek tpsakrvplp tvtveerdwl ealscspppc srreagmatq
      901 dlvasplpth lipcllepls tllvslhlde rlwlppllsk ggaviesvvv svlqdkrlpk
      961 dhwwfhvhdl lqdsevsgei errlshagml igefsftdyd mgdvsdnggt fepsivrnsg
     1021 tcsslsrnty ftstrktgfr iliagsprsg qkhlaacllh cfignieiqk fdistiaqeg
     1081 ngdliygvtq ilmkcasmgs svlfmpridl wvvettnqvs eessspstfh qtpmeedpql
     1141 vekengsslq yelagtaqat asvqsvshaw ssfveqvesi cvstsliiva tsevpylelp
     1201 erirqffqsg qpncshrttr ehtvprftvh vgnnfnrdmv iklsaaqlsr dilqpfvhli
     1261 hqrshvhkds rtknsvqtsg taendnasqg lacekgvase mcgelsvtvp aaptnsrnlk
     1321 gksslmlais sfgfqilryp hfaelcwvts klkegpsadv agpwkgwpfn sciirptnll
     1381 dkaavacgps sskskgkfgl vrglvavgls ayrgvytslr evssevrkvl ellvgwinek
     1441 vntgkdryqy vrilsqvayl edmvnsways lqsldqdvqi kaaslepydl gspdnhftca
     1501 ndtdqveecr prscpeteva nneeftmqnt nsidlnkkdd hcasdhegkl dlfedaaqgi
     1561 gisgnttsee hhnssvanql ivhvdkqnga tpgpcgsest rnptfegelt mrnmdwidln
     1621 kmdangapsq kgkivavdka vdhislggnt isvehhnyfa andpvflvdk qngsnpgpsg
     1681 sesprnpvve gdpesskqsn gfapngpvls engfcssdel dgaklpasak acdtettits
     1741 edgkptgher kevpnfssse talptesvvt cfyhccsdcl hslpclmqkv llkewksngs
     1801 dltvddvhdt vallsvdlls tvrklfaary ssnkfdenlr menprklshr pewsicqces
     1861 senslvipke cschtvgnts pniqfgfdpk fvyrdgvlvp idsnkevsfh ckfdtlclcs
     1921 liesilmtkq pfd
//
LOCUS       XP_016727966             337 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized exonuclease domain-containing protein At3g15140
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727966
VERSION     XP_016727966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872477.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..337
                     /product="uncharacterized exonuclease domain-containing
                     protein At3g15140 isoform X1"
                     /calculated_mol_wt=38679
     Region          123..302
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Site            order(127..130,132,170,224..228,232,285,290)
                     /site_type="active"
                     /db_xref="CDD:99836"
     Site            order(127..130,132,170,224..228,232,285,290)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99836"
     Site            order(127,129,228,285,290)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99836"
     CDS             1..337
                     /gene="LOC107939189"
                     /coded_by="XM_016872477.2:76..1089"
                     /db_xref="GeneID:107939189"
ORIGIN      
        1 mayltripvg rifgfwsrsf sspiknpffs stlshvpsyk isttahyssp spspppplsa
       61 amntqvfsss srwrpmclyf tqgkctqmdd pshlekfnhd cskdlqvngt diekkcsqnv
      121 dfllvidleg kveilefpvl lidakslslv dffhrfvrpt kmseqavnky iegkygeigv
      181 drvwhdtaqp fkevmqqfea wlsqhnlwek ekgsrltraa fvtcgnwdlk tkipqqcevs
      241 giklppyfme winlkdvyln fygreargmm smmkqleipl lgchhlgidd skniarvlqr
      301 mlvdgalmqv takrnpgsqk veflfenriq hpsrqrr
//
LOCUS       XP_016727968             310 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized exonuclease domain-containing protein At3g15140
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727968
VERSION     XP_016727968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="uncharacterized exonuclease domain-containing
                     protein At3g15140 isoform X2"
                     /calculated_mol_wt=35581
     Region          123..275
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Site            order(127..130,132,197..201,205,258,263)
                     /site_type="active"
                     /db_xref="CDD:99836"
     Site            order(127..130,132,197..201,205,258,263)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99836"
     Site            order(127,129,201,258,263)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99836"
     CDS             1..310
                     /gene="LOC107939189"
                     /coded_by="XM_016872479.2:59..991"
                     /db_xref="GeneID:107939189"
ORIGIN      
        1 mayltripvg rifgfwsrsf sspiknpffs stlshvpsyk isttahyssp spspppplsa
       61 amntqvfsss srwrpmclyf tqgkctqmdd pshlekfnhd cskdlqvngt diekkcsqnv
      121 dfllvidleg kveilefpvl lidakslslv dffhrvwhdt aqpfkevmqq feawlsqhnl
      181 wekekgsrlt raafvtcgnw dlktkipqqc evsgiklppy fmewinlkdv ylnfygrear
      241 gmmsmmkqle ipllgchhlg iddskniarv lqrmlvdgal mqvtakrnpg sqkveflfen
      301 riqhpsrqrr
//
LOCUS       XP_016727969             256 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 SUMO-protein ligase MMS21 [Gossypium hirsutum].
ACCESSION   XP_016727969
VERSION     XP_016727969.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872480.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727969.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="E3 SUMO-protein ligase MMS21"
                     /calculated_mol_wt=28596
     Region          159..228
                     /region_name="SPL-RING_NSE2"
                     /note="SPL-RING finger found in E3 SUMO-protein ligase
                     NSE2 and similar proteins; cd16651"
                     /db_xref="CDD:438313"
     CDS             1..256
                     /gene="LOC107939190"
                     /coded_by="XM_016872480.2:116..886"
                     /db_xref="GeneID:107939190"
ORIGIN      
        1 mastsasrsd gvssrirraa stvnsdnqll vsdirkamnl mkdiavdler dnqsdmvkql
       61 enavaelvea henclhyssa ihsvadayrp gpeltdfkkl ldtefekvka gssshpqnhp
      121 lmhqfqqavw nvhhagqpmp geeqediimt stessiknlk cpltgkhite ltepvrsmdc
      181 khiyeknail iyikshhnna kcpesacpkm vhakrvicdp lllveieeqc tlsrqtartd
      241 vvedftemep hdedst
//
LOCUS       XP_016727961             202 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein ATHB-52 [Gossypium hirsutum].
ACCESSION   XP_016727961
VERSION     XP_016727961.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872472.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="homeobox-leucine zipper protein ATHB-52"
                     /calculated_mol_wt=23825
     Region          37..92
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..202
                     /gene="LOC107939183"
                     /coded_by="XM_016872472.2:30..638"
                     /db_xref="GeneID:107939183"
ORIGIN      
        1 myiyrvikpl ensqpkftff rslkimdfqs qrlyspkynk krlnqeqvrl lersfsankk
       61 lepelklqla nqlgvpprqv aiwyqnkrar wktqsmeldc ntlqvklena lsekrrlekd
      121 vkylqeelrk aqetmfamnn nqranhhhhq qqqdqplnyf vscnstgsse eggsssfhed
      181 hevlqidely acliggdrst ws
//
LOCUS       XP_016701945             359 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CUP-SHAPED COTYLEDON 2 [Gossypium hirsutum].
ACCESSION   XP_016701945
VERSION     XP_016701945.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846456.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701945.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="protein CUP-SHAPED COTYLEDON 2"
                     /calculated_mol_wt=39493
     Region          15..141
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..359
                     /gene="LOC107917066"
                     /coded_by="XM_016846456.2:380..1459"
                     /db_xref="GeneID:107917066"
ORIGIN      
        1 mdsyhhfdng dthlppgfrf hptdeelity yllkkvldss ftgraiaevd lnkcepwelp
       61 ekakmgekew yffslrdrky ptglrtnrat eagywkatgk dreiysskts alvgmkktlv
      121 fyrgrapkge ksnwvmheyr legkfayhyl srsskdewvi srvfqksgsg ngasssnggg
      181 arktgrmsas ialyqepssp ssislpplld ptttavsltd rdscsydsht qsehvscfst
      241 iaaaaasaaa tstttphlfh pgfdlamppq spqmmnnsfd sisrysrnpg vsvfpslrsl
      301 qenlqfpfff sqptmaaapp lhggsplnfg avseegnngs gagakisigq sefdcmwty
//
LOCUS       XP_016742818             211 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor 4 [Gossypium hirsutum].
ACCESSION   XP_016742818
VERSION     XP_016742818.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742818.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="ethylene-responsive transcription factor 4"
                     /calculated_mol_wt=23168
     Region          57..117
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(59..60,62,64,66,68,72,74,81,83,86)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..211
                     /gene="LOC107952085"
                     /coded_by="XM_016887329.2:215..850"
                     /db_xref="GeneID:107952085"
ORIGIN      
        1 mksqtvrfel ilhyittsls fpsslthsfa aqgrkknmap ksqpvnpnpn ttmneiryrg
       61 vrkrpwgrya aeirnprkka rvwlgtfdta eeaaraydaa arefrgakak tnftytnind
      121 ftlspsqsst vessspppld ltlasgsisl pmtanhpvff vdvfasagkr lsdaggaqsd
      181 sdssssvvdf ergvqprvfe fdlnqlpaem i
//
LOCUS       XP_016742819             143 aa            linear   PLN 06-AUG-2024
DEFINITION  protein yippee-like At5g53940 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742819
VERSION     XP_016742819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..143
                     /product="protein yippee-like At5g53940 isoform X1"
                     /calculated_mol_wt=16198
     Region          14..106
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..143
                     /gene="LOC107952086"
                     /coded_by="XM_016887330.2:214..645"
                     /db_xref="GeneID:107952086"
ORIGIN      
        1 mgrifvveld grsyrckfcr thlalpddlv srsfhcrrgk aylfnnaipf srvnitvgal
       61 eervmlsgmh tvadifcccc gqivgwkyea aheksqkyke gkfvlerlvr sfasdrgriv
      121 deidfssevy idtrpsmsdg eda
//
LOCUS       XP_016742820             138 aa            linear   PLN 06-AUG-2024
DEFINITION  protein yippee-like At5g53940 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016742820
VERSION     XP_016742820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887331.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="protein yippee-like At5g53940 isoform X2"
                     /calculated_mol_wt=15597
     Region          14..101
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..138
                     /gene="LOC107952086"
                     /coded_by="XM_016887331.2:214..630"
                     /db_xref="GeneID:107952086"
ORIGIN      
        1 mgrifvveld grsyrckfcr thlalpddlv srsfhcrrgk aylfnnavni tvgaleervm
       61 lsgmhtvadi fccccgqivg wkyeaaheks qkykegkfvl erlvrsfasd rgrivdeidf
      121 ssevyidtrp smsdgeda
//
LOCUS       XP_016742821             134 aa            linear   PLN 06-AUG-2024
DEFINITION  protein yippee-like At5g53940 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016742821
VERSION     XP_016742821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="protein yippee-like At5g53940 isoform X3"
                     /calculated_mol_wt=15165
     Region          14..110
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..134
                     /gene="LOC107952086"
                     /coded_by="XM_016887332.2:177..581"
                     /db_xref="GeneID:107952086"
ORIGIN      
        1 mgrifvveld grsyrckfcr thlalpddlv srsfhcrrgk aylfnnaipf srvnitvgal
       61 eervmlsgmh tvadifcccc gqivgwkyea aheksqkyke gkfvlergri vdeidfssev
      121 yidtrpsmsd geda
//
LOCUS       XP_016742822             129 aa            linear   PLN 06-AUG-2024
DEFINITION  protein yippee-like At5g53940 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016742822
VERSION     XP_016742822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..129
                     /product="protein yippee-like At5g53940 isoform X4"
                     /calculated_mol_wt=14565
     Region          14..105
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..129
                     /gene="LOC107952086"
                     /coded_by="XM_016887333.2:214..603"
                     /db_xref="GeneID:107952086"
ORIGIN      
        1 mgrifvveld grsyrckfcr thlalpddlv srsfhcrrgk aylfnnavni tvgaleervm
       61 lsgmhtvadi fccccgqivg wkyeaaheks qkykegkfvl ergrivdeid fssevyidtr
      121 psmsdgeda
//
LOCUS       XP_016742823             694 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 26 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742823
VERSION     XP_016742823.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887334.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742823.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..694
                     /product="serine/threonine-protein kinase 26 isoform X1"
                     /calculated_mol_wt=77097
     Region          13..287
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,204,213)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,140..141,
                     143,154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,136,138..140,157,171..174,176,204,213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(153..164,166..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..694
                     /gene="LOC107952087"
                     /coded_by="XM_016887334.2:391..2475"
                     /db_xref="GeneID:107952087"
ORIGIN      
        1 madiaglpea agsrfsqsel igrgsfgdvy kafdkelnke vaikvidlee sedeiediqk
       61 eisvlsqcrc pyiteyygsy lhqtklwiim eymaggsvad llqsgpplde msiacisrdl
      121 lhaieylhne gkihrdikaa nilltengdv kvadfgvsaq ltrtisrrkt fvgtpfwmap
      181 eviqnsegyn ekadiwslgi tviemakgep plsdlhpmrv lfiiprenpp qldehfsrpm
      241 kefvslclkk vpaerpsare llkhrfirna rksqklleri rerpkyqlke daetprtgpk
      301 avgestdtvk vkrdirgeet vrassnqgkt fknagwdfsi ggpnstgtvr savrppqvre
      361 rkvevannqa iprtqesgna pdefpenssg katrdsyynk nqdnnyddem svsgsgtvvi
      421 rsprgsqssa llndpsslss styastedas tfgtvvmrgq hdesdsprtp rsrlgfqert
      481 ssasvedsas nlaeakaaiq aglrkgnard rsglskintp gqenrrrdqv snssdssrss
      541 rdyfdaqrff prsrqpsdde enakiisssv slsmllipsl kevipddsev svvravtnsl
      601 tkmegakpgs cealvrrlle rlassressm kdmqelavrl fnkgkttsed tqtpnmeids
      661 rrkqqlnsns nlsplarfll srwqsqtsrd lnps
//
LOCUS       XP_016742826             693 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 26 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016742826
VERSION     XP_016742826.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742826.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..693
                     /product="serine/threonine-protein kinase 26 isoform X2"
                     /calculated_mol_wt=77010
     Region          13..287
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,204,213)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,140..141,
                     143,154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,136,138..140,157,171..174,176,204,213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(153..164,166..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..693
                     /gene="LOC107952087"
                     /coded_by="XM_016887337.2:391..2472"
                     /db_xref="GeneID:107952087"
ORIGIN      
        1 madiaglpea agsrfsqsel igrgsfgdvy kafdkelnke vaikvidlee sedeiediqk
       61 eisvlsqcrc pyiteyygsy lhqtklwiim eymaggsvad llqsgpplde msiacisrdl
      121 lhaieylhne gkihrdikaa nilltengdv kvadfgvsaq ltrtisrrkt fvgtpfwmap
      181 eviqnsegyn ekadiwslgi tviemakgep plsdlhpmrv lfiiprenpp qldehfsrpm
      241 kefvslclkk vpaerpsare llkhrfirna rksqklleri rerpkyqlke daetprtgpk
      301 avgestdtvk vkrdirgeet vrasnqgktf knagwdfsig gpnstgtvrs avrppqvrer
      361 kvevannqai prtqesgnap defpenssgk atrdsyynkn qdnnyddems vsgsgtvvir
      421 sprgsqssal lndpsslsss tyastedast fgtvvmrgqh desdsprtpr srlgfqerts
      481 sasvedsasn laeakaaiqa glrkgnardr sglskintpg qenrrrdqvs nssdssrssr
      541 dyfdaqrffp rsrqpsddee nakiisssvs lsmllipslk evipddsevs vvravtnslt
      601 kmegakpgsc ealvrrller lassressmk dmqelavrlf nkgkttsedt qtpnmeidsr
      661 rkqqlnsnsn lsplarflls rwqsqtsrdl nps
//
LOCUS       XP_016742827             693 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 26 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016742827
VERSION     XP_016742827.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742827.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..693
                     /product="serine/threonine-protein kinase 26 isoform X3"
                     /calculated_mol_wt=76941
     Region          13..287
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,204,213)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,140..141,
                     143,154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,136,138..140,157,171..174,176,204,213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(153..164,166..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..693
                     /gene="LOC107952087"
                     /coded_by="XM_016887338.2:363..2444"
                     /db_xref="GeneID:107952087"
ORIGIN      
        1 madiaglpea agsrfsqsel igrgsfgdvy kafdkelnke vaikvidlee sedeiediqk
       61 eisvlsqcrc pyiteyygsy lhqtklwiim eymaggsvad llqsgpplde msiacisrdl
      121 lhaieylhne gkihrdikaa nilltengdv kvadfgvsaq ltrtisrrkt fvgtpfwmap
      181 eviqnsegyn ekadiwslgi tviemakgep plsdlhpmrv lfiiprenpp qldehfsrpm
      241 kefvslclkk vpaerpsare llkhrfirna rksqklleri rerpkyqlke daetprtgpk
      301 avgestdtvk vkrdirgeet vrassnqgkt fknagwdfsi ggpnstgtvr savrppqvre
      361 rkvevannqa iprtqesgna pdefpenssg katrdsyynk nqdnnyddem svsgsgtvvi
      421 rsprgsqssa llndpsslss styastedas tfgtvvmrgq hdesdsprtp rsrlgfqert
      481 ssasvedsas nlaeakaaiq aglrkgnard rsglskintp gqenrrrdqv snssdssssr
      541 dyfdaqrffp rsrqpsddee nakiisssvs lsmllipslk evipddsevs vvravtnslt
      601 kmegakpgsc ealvrrller lassressmk dmqelavrlf nkgkttsedt qtpnmeidsr
      661 rkqqlnsnsn lsplarflls rwqsqtsrdl nps
//
LOCUS       XP_040942835             692 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 26 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942835
VERSION     XP_040942835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086901.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..692
                     /product="serine/threonine-protein kinase 26 isoform X4"
                     /calculated_mol_wt=76854
     Region          13..287
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,204,213)
                     /site_type="active"
                     /db_xref="CDD:270786"
     Site            order(21..25,29,42,44,61,74,90..93,96..97,100,140..141,
                     143,154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270786"
     Site            order(24..25,136,138..140,157,171..174,176,204,213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(153..164,166..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..692
                     /gene="LOC107952087"
                     /coded_by="XM_041086901.1:362..2440"
                     /db_xref="GeneID:107952087"
ORIGIN      
        1 madiaglpea agsrfsqsel igrgsfgdvy kafdkelnke vaikvidlee sedeiediqk
       61 eisvlsqcrc pyiteyygsy lhqtklwiim eymaggsvad llqsgpplde msiacisrdl
      121 lhaieylhne gkihrdikaa nilltengdv kvadfgvsaq ltrtisrrkt fvgtpfwmap
      181 eviqnsegyn ekadiwslgi tviemakgep plsdlhpmrv lfiiprenpp qldehfsrpm
      241 kefvslclkk vpaerpsare llkhrfirna rksqklleri rerpkyqlke daetprtgpk
      301 avgestdtvk vkrdirgeet vrasnqgktf knagwdfsig gpnstgtvrs avrppqvrer
      361 kvevannqai prtqesgnap defpenssgk atrdsyynkn qdnnyddems vsgsgtvvir
      421 sprgsqssal lndpsslsss tyastedast fgtvvmrgqh desdsprtpr srlgfqerts
      481 sasvedsasn laeakaaiqa glrkgnardr sglskintpg qenrrrdqvs nssdssssrd
      541 yfdaqrffpr srqpsddeen akiisssvsl smllipslke vipddsevsv vravtnsltk
      601 megakpgsce alvrrllerl assressmkd mqelavrlfn kgkttsedtq tpnmeidsrr
      661 kqqlnsnsnl splarfllsr wqsqtsrdln ps
//
LOCUS       XP_016742828             645 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016742828
VERSION     XP_016742828.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887339.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742828.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..645
                     /product="germinal center kinase 1 isoform X5"
                     /calculated_mol_wt=71801
     Region          2..238
                     /region_name="STKc_MST3_like"
                     /note="Catalytic domain of Mammalian Ste20-like protein
                     kinase 3-like Serine/Threonine Kinases; cd06609"
                     /db_xref="CDD:270786"
     Site            order(87,89..91,108,122..125,127,155,164)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270786"
     Site            order(104..115,117..127)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270786"
     CDS             1..645
                     /gene="LOC107952087"
                     /coded_by="XM_016887339.2:68..2005"
                     /db_xref="GeneID:107952087"
ORIGIN      
        1 mgedeiediq keisvlsqcr cpyiteyygs ylhqtklwii meymaggsva dllqsgppld
       61 emsiacisrd llhaieylhn egkihrdika anilltengd vkvadfgvsa qltrtisrrk
      121 tfvgtpfwma peviqnsegy nekadiwslg itviemakge pplsdlhpmr vlfiiprenp
      181 pqldehfsrp mkefvslclk kvpaerpsar ellkhrfirn arksqkller irerpkyqlk
      241 edaetprtgp kavgestdtv kvkrdirgee tvrassnqgk tfknagwdfs iggpnstgtv
      301 rsavrppqvr erkvevannq aiprtqesgn apdefpenss gkatrdsyyn knqdnnydde
      361 msvsgsgtvv irsprgsqss allndpssls sstyasteda stfgtvvmrg qhdesdsprt
      421 prsrlgfqer tssasvedsa snlaeakaai qaglrkgnar drsglskint pgqenrrrdq
      481 vsnssdssrs srdyfdaqrf fprsrqpsdd eenakiisss vslsmllips lkevipddse
      541 vsvvravtns ltkmegakpg scealvrrll erlassress mkdmqelavr lfnkgkttse
      601 dtqtpnmeid srrkqqlnsn snlsplarfl lsrwqsqtsr dlnps
//
LOCUS       XP_016742829             584 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016742829
VERSION     XP_016742829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..584
                     /product="germinal center kinase 1 isoform X6"
                     /calculated_mol_wt=64860
     Region          <2..177
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..584
                     /gene="LOC107952087"
                     /coded_by="XM_016887340.2:155..1909"
                     /db_xref="GeneID:107952087"
ORIGIN      
        1 msiacisrdl lhaieylhne gkihrdikaa nilltengdv kvadfgvsaq ltrtisrrkt
       61 fvgtpfwmap eviqnsegyn ekadiwslgi tviemakgep plsdlhpmrv lfiiprenpp
      121 qldehfsrpm kefvslclkk vpaerpsare llkhrfirna rksqklleri rerpkyqlke
      181 daetprtgpk avgestdtvk vkrdirgeet vrassnqgkt fknagwdfsi ggpnstgtvr
      241 savrppqvre rkvevannqa iprtqesgna pdefpenssg katrdsyynk nqdnnyddem
      301 svsgsgtvvi rsprgsqssa llndpsslss styastedas tfgtvvmrgq hdesdsprtp
      361 rsrlgfqert ssasvedsas nlaeakaaiq aglrkgnard rsglskintp gqenrrrdqv
      421 snssdssrss rdyfdaqrff prsrqpsdde enakiisssv slsmllipsl kevipddsev
      481 svvravtnsl tkmegakpgs cealvrrlle rlassressm kdmqelavrl fnkgkttsed
      541 tqtpnmeids rrkqqlnsns nlsplarfll srwqsqtsrd lnps
//
LOCUS       XP_016742830             611 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine repetitive matrix protein 2 [Gossypium hirsutum].
ACCESSION   XP_016742830
VERSION     XP_016742830.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742830.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..611
                     /product="serine/arginine repetitive matrix protein 2"
                     /calculated_mol_wt=67698
     CDS             1..611
                     /gene="LOC107952089"
                     /coded_by="XM_016887341.2:243..2078"
                     /db_xref="GeneID:107952089"
ORIGIN      
        1 mgkssslkkk rskrssqlrm rkrnkvkgkk skskklrhrq ddsvsysddt dststasiss
       61 ssseddyksr rsqsrnrkdm kgkkkrarrr ssgressgns pcikkrggsr krtskrkkst
      121 rdvimssrss ssrslscstc psdsdesgye krkgrserre kygrsekvkg gskrskgrsr
      181 scsscsryne gsdhsigerv meesntrrlk svitvvkren essreliade pkedvydydd
      241 ypscrsndsn dgcnprelqq yphaisetkr ppddeqvevs nvrmssieei nvsnatdgli
      301 gddielilrq halenlkkfr grlqkninpp itpndnsaad vktlssvntd sfqikapkad
      361 dgrmvitsqv sqqirqspvr rdsstlpknd rntphmsdgr ysetvgsdla pplarvvsts
      421 vptnkpklvi sqtgleapnt httwkqeaat qepcqaklvt dsnvdeggle ttqtikpsee
      481 naasvsnrpk svklragqep pntystqkqd saalessqgk svtessvnds ssqsvnphec
      541 gnpgskvndt cnkptssgni ssdkledetk dgsqfqqktm svmrggemvq vsyqvyipkr
      601 apalarrqlk r
//
LOCUS       XP_016742831             407 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RICE SALT SENSITIVE 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742831
VERSION     XP_016742831.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887342.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742831.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..407
                     /product="protein RICE SALT SENSITIVE 3 isoform X1"
                     /calculated_mol_wt=45416
     Region          19..187
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     CDS             1..407
                     /gene="LOC107952090"
                     /coded_by="XM_016887342.2:335..1558"
                     /db_xref="GeneID:107952090"
ORIGIN      
        1 mvgsgsadrs keavgmmalh ealrsvclns dwtysvfwti rprlrvrggn gckvgddsgs
       61 lmlmwedgfc rgrvtdylee idgedpvkka fsklsiqlyn ygeglmgkva sdkchkwvfk
      121 eptecepnvs nywqssfdal ppewtdqfds giqtiaviqa ghgllqlgsc kiipedlhfv
      181 lrmrhtfesl gyqssfylsq mfssnrngss sttvpskqsa iptwpppppa vfgwnqrplp
      241 patpmvaspn yqnparlgfp qakdetsmfl mphssetrme dmmsehendi kwpngltffn
      301 altgrnedak llvnpeslgn kqdpnhlplm vegkdsnrns dtdanptefl sldshpenir
      361 kmenkfkrsf tlparmatss ssglldqqqq qqadagmyad amdtflk
//
LOCUS       XP_040942836             302 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RICE SALT SENSITIVE 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942836
VERSION     XP_040942836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086902.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="protein RICE SALT SENSITIVE 3 isoform X2"
                     /calculated_mol_wt=33746
     Region          <2..82
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     CDS             1..302
                     /gene="LOC107952090"
                     /coded_by="XM_041086902.1:145..1053"
                     /db_xref="GeneID:107952090"
ORIGIN      
        1 mgkvasdkch kwvfkeptec epnvsnywqs sfdalppewt dqfdsgiqti aviqaghgll
       61 qlgsckiipe dlhfvlrmrh tfeslgyqss fylsqmfssn rngsssttvp skqsaiptwp
      121 ppppavfgwn qrplppatpm vaspnyqnpa rlgfpqakde tsmflmphss etrmedmmse
      181 hendikwpng ltffnaltgr nedakllvnp eslgnkqdpn hlplmvegkd snrnsdtdan
      241 pteflsldsh penirkmenk fkrsftlpar matssssgll dqqqqqqada gmyadamdtf
      301 lk
//
LOCUS       XP_016743337             231 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743337
VERSION     XP_016743337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887848.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..231
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25641
     CDS             1..231
                     /gene="LOC107952668"
                     /coded_by="XM_016887848.2:138..833"
                     /db_xref="GeneID:107952668"
ORIGIN      
        1 metdrrkrss sgeifsfpst pnqdldsefe fgcftpdsps qdpcrtspad hlffngrllp
       61 hafplqpgtt iagscsrgts rtssinskds lmssrsnstn srsscssart sssdnserrl
      121 lyhskihacn kaskmvtaql ygdsqrwqyi tqvpvlkrev srrknsgveg kealrakkqg
      181 ehhqkrsssg rgrsgpclkf frlflfacrv chamepsrkq dvmhgnlkna v
//
LOCUS       XP_016742832             286 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 39 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742832
VERSION     XP_016742832.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742832.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..286
                     /product="probable protein phosphatase 2C 39 isoform X1"
                     /calculated_mol_wt=31064
     Region          51..286
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(54..55,76..78,238,277)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..286
                     /gene="LOC107952091"
                     /coded_by="XM_016887343.2:179..1039"
                     /db_xref="GeneID:107952091"
ORIGIN      
        1 masgreilhk mkekvqekvg lgataesgkg kskasknikh gyhlvegksl hpmedyvvae
       61 fkhvgdselg lfaifdghls qvipdylksh lfdnilnepd fwigpenair kgyritdqdi
      121 lekavdlgqg gstavtaili ngqklvianv gdsravickn seakqlsvdh epttekesie
      181 nrggfvsnfp gdvarvdgql avarafgdks lkehlssepd vtveiidddt ellilasdgl
      241 wkvmtnqeav dairnvkdaw saaklltdea vkrnstddis civvtf
//
LOCUS       XP_040942837             269 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 39 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942837
VERSION     XP_040942837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086903.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="probable protein phosphatase 2C 39 isoform X2"
                     /calculated_mol_wt=29052
     Region          51..269
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(54..55,76..78,221,260)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..269
                     /gene="LOC107952091"
                     /coded_by="XM_041086903.1:117..926"
                     /db_xref="GeneID:107952091"
ORIGIN      
        1 masgreilhk mkekvqekvg lgataesgkg kskasknikh gyhlvegksl hpmedyvvae
       61 fkhvgdselg lfaifdghls qpdfwigpen airkgyritd qdilekavdl gqggstavta
      121 ilingqklvi anvgdsravi cknseakqls vdheptteke sienrggfvs nfpgdvarvd
      181 gqlavarafg dkslkehlss epdvtveiid ddtellilas dglwkvmtnq eavdairnvk
      241 dawsaakllt deavkrnstd discivvtf
//
LOCUS       XP_016742833             182 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding protein 1 [Gossypium hirsutum].
ACCESSION   XP_016742833
VERSION     XP_016742833.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742833.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="squamosa promoter-binding protein 1"
                     /calculated_mol_wt=20129
     Region          59..132
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..182
                     /gene="LOC107952092"
                     /coded_by="XM_016887344.2:145..693"
                     /db_xref="GeneID:107952092"
ORIGIN      
        1 mnkdfmaedv dndmeeeggg eeeeegavyh gvqddekkkk asgrrgssgg vggvlppscq
       61 vekcgvdlsv akryhrrhkv ceihakapvv vvagirqrfc qqcsrfhels efdeakrscr
      121 srlaghnerr rkssaessae gssrkgtspq lkegycrqvd dqrarvpiti pgnssfkrsh
      181 ir
//
LOCUS       XP_016742834             178 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016742834
VERSION     XP_016742834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..178
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19223
     CDS             1..178
                     /gene="LOC107952093"
                     /coded_by="XM_016887345.2:186..722"
                     /db_xref="GeneID:107952093"
ORIGIN      
        1 meatflakra lfnipkflsq gpppiqsarr ltraclssay eraegsnava eaegssadda
       61 prdsmyetkh psfvtgegrp pgsatsfaad takdgikkav gmaenvgeta kktldgawra
      121 ardgaqgike rvvnqndedd edddeieedv avdeirkvdq lldtqeyrsi eeskkmqa
//
LOCUS       XP_016742837            1052 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 2 [Gossypium hirsutum].
ACCESSION   XP_016742837
VERSION     XP_016742837.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887348.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742837.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1052
                     /product="phytosulfokine receptor 2"
                     /calculated_mol_wt=115119
     Region          55..1044
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          184..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          349..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          397..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..518
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          519..580
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          581..604
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          605..626
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1052
                     /gene="LOC107952094"
                     /coded_by="XM_016887348.2:455..3613"
                     /db_xref="GeneID:107952094"
ORIGIN      
        1 mlvmgfipma flnwvflals icsslsletv gqpcdpndll aleefagnlt egsiitswsn
       61 vsnccqwdgv vcgsksnnvs vsnkvtslil pkrglkgkis isltkldqlk kldlscnhlm
      121 gvlplelsnl kqlvfldlsy nllsgpvskp vsgltliqwl nissnlfkge lsefgrfpdv
      181 avfnlsnnsf tgqvssqics yskqiqvldl smnhlvgsle glsncsvslh qlhldynsls
      241 gdlpdslysm sslerfsilg nnfsgqlsnk lsklsslkyl visgnhfsgr ipdvfgnlaq
      301 lelfcahsnf fsgplpssls lcsklrvldl rnnslsgpld lnftgmpnls aldlatnhls
      361 gslpaslsdc kelqvlslak nefggripks fanlrslvfl slsnnsfvdl sgalsvlqqc
      421 knltililtk nlygdeiprn vsgfesltvl algncalkgq ipdwlsgckk levldlswnh
      481 lngsiptwig qmeslfyldf snnsltgeip ksltqlksli ssnsslatfs ssagiplyvk
      541 rnqsssglqy nqlssfppsl ylsnnrlngt ifpeigllkq lhvldlsrnn itgvipasis
      601 dmknleildl syndlhgsip lsfaeltfls kfsvaynhlq gviptggqfy sfssssfegn
      661 pglcgkivsp chvmdgmlkp aipsgsnnkf grssilgiti sigvgivlll aivllrmskr
      721 dvgstvdnld eelsrshrls ealgssklvl fqssnckelt vtdllkstnn fnqaniigcg
      781 gfglvykayl pdgtnaavkr lsgdcgqmer efraeveals raqhknlvsl qgyckhgndr
      841 lliysymeng sldywlhesv dgssvlkwdv rlkiaqgaac glaylhkvce phivhrdvks
      901 snilldekfe ahladfglsr llrpydthvt tdlvgtlgyi ppeysqtlta tcrgdvysfg
      961 vvllelltgr rpvevckgkn crdlvswvfq mkfekresei idsslwdkel ekqlldmlei
     1021 acrcldqdpr rrplidevvs wlnsignevv rq
//
LOCUS       XP_016742836            1052 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 2 [Gossypium hirsutum].
ACCESSION   XP_016742836
VERSION     XP_016742836.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887347.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742836.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1052
                     /product="phytosulfokine receptor 2"
                     /calculated_mol_wt=115119
     Region          55..1044
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          184..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          349..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          397..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..518
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          519..580
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          581..604
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          605..626
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1052
                     /gene="LOC107952094"
                     /coded_by="XM_016887347.2:496..3654"
                     /db_xref="GeneID:107952094"
ORIGIN      
        1 mlvmgfipma flnwvflals icsslsletv gqpcdpndll aleefagnlt egsiitswsn
       61 vsnccqwdgv vcgsksnnvs vsnkvtslil pkrglkgkis isltkldqlk kldlscnhlm
      121 gvlplelsnl kqlvfldlsy nllsgpvskp vsgltliqwl nissnlfkge lsefgrfpdv
      181 avfnlsnnsf tgqvssqics yskqiqvldl smnhlvgsle glsncsvslh qlhldynsls
      241 gdlpdslysm sslerfsilg nnfsgqlsnk lsklsslkyl visgnhfsgr ipdvfgnlaq
      301 lelfcahsnf fsgplpssls lcsklrvldl rnnslsgpld lnftgmpnls aldlatnhls
      361 gslpaslsdc kelqvlslak nefggripks fanlrslvfl slsnnsfvdl sgalsvlqqc
      421 knltililtk nlygdeiprn vsgfesltvl algncalkgq ipdwlsgckk levldlswnh
      481 lngsiptwig qmeslfyldf snnsltgeip ksltqlksli ssnsslatfs ssagiplyvk
      541 rnqsssglqy nqlssfppsl ylsnnrlngt ifpeigllkq lhvldlsrnn itgvipasis
      601 dmknleildl syndlhgsip lsfaeltfls kfsvaynhlq gviptggqfy sfssssfegn
      661 pglcgkivsp chvmdgmlkp aipsgsnnkf grssilgiti sigvgivlll aivllrmskr
      721 dvgstvdnld eelsrshrls ealgssklvl fqssnckelt vtdllkstnn fnqaniigcg
      781 gfglvykayl pdgtnaavkr lsgdcgqmer efraeveals raqhknlvsl qgyckhgndr
      841 lliysymeng sldywlhesv dgssvlkwdv rlkiaqgaac glaylhkvce phivhrdvks
      901 snilldekfe ahladfglsr llrpydthvt tdlvgtlgyi ppeysqtlta tcrgdvysfg
      961 vvllelltgr rpvevckgkn crdlvswvfq mkfekresei idsslwdkel ekqlldmlei
     1021 acrcldqdpr rrplidevvs wlnsignevv rq
//
LOCUS       XP_016742835            1052 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 2 [Gossypium hirsutum].
ACCESSION   XP_016742835
VERSION     XP_016742835.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742835.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1052
                     /product="phytosulfokine receptor 2"
                     /calculated_mol_wt=115119
     Region          55..1044
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          184..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          253..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          349..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          397..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..518
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          519..580
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          581..604
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          605..626
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1052
                     /gene="LOC107952094"
                     /coded_by="XM_016887346.2:770..3928"
                     /db_xref="GeneID:107952094"
ORIGIN      
        1 mlvmgfipma flnwvflals icsslsletv gqpcdpndll aleefagnlt egsiitswsn
       61 vsnccqwdgv vcgsksnnvs vsnkvtslil pkrglkgkis isltkldqlk kldlscnhlm
      121 gvlplelsnl kqlvfldlsy nllsgpvskp vsgltliqwl nissnlfkge lsefgrfpdv
      181 avfnlsnnsf tgqvssqics yskqiqvldl smnhlvgsle glsncsvslh qlhldynsls
      241 gdlpdslysm sslerfsilg nnfsgqlsnk lsklsslkyl visgnhfsgr ipdvfgnlaq
      301 lelfcahsnf fsgplpssls lcsklrvldl rnnslsgpld lnftgmpnls aldlatnhls
      361 gslpaslsdc kelqvlslak nefggripks fanlrslvfl slsnnsfvdl sgalsvlqqc
      421 knltililtk nlygdeiprn vsgfesltvl algncalkgq ipdwlsgckk levldlswnh
      481 lngsiptwig qmeslfyldf snnsltgeip ksltqlksli ssnsslatfs ssagiplyvk
      541 rnqsssglqy nqlssfppsl ylsnnrlngt ifpeigllkq lhvldlsrnn itgvipasis
      601 dmknleildl syndlhgsip lsfaeltfls kfsvaynhlq gviptggqfy sfssssfegn
      661 pglcgkivsp chvmdgmlkp aipsgsnnkf grssilgiti sigvgivlll aivllrmskr
      721 dvgstvdnld eelsrshrls ealgssklvl fqssnckelt vtdllkstnn fnqaniigcg
      781 gfglvykayl pdgtnaavkr lsgdcgqmer efraeveals raqhknlvsl qgyckhgndr
      841 lliysymeng sldywlhesv dgssvlkwdv rlkiaqgaac glaylhkvce phivhrdvks
      901 snilldekfe ahladfglsr llrpydthvt tdlvgtlgyi ppeysqtlta tcrgdvysfg
      961 vvllelltgr rpvevckgkn crdlvswvfq mkfekresei idsslwdkel ekqlldmlei
     1021 acrcldqdpr rrplidevvs wlnsignevv rq
//
LOCUS       XP_016742838             296 aa            linear   PLN 06-AUG-2024
DEFINITION  3-hydroxybutyryl-CoA dehydrogenase [Gossypium hirsutum].
ACCESSION   XP_016742838
VERSION     XP_016742838.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887349.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742838.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..296
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /calculated_mol_wt=32087
     Region          1..288
                     /region_name="PLN02545"
                     /note="3-hydroxybutyryl-CoA dehydrogenase"
                     /db_xref="CDD:215300"
     CDS             1..296
                     /gene="LOC107952096"
                     /coded_by="XM_016887349.2:192..1082"
                     /db_xref="GeneID:107952096"
ORIGIN      
        1 maeaknlgvv gsgqmgsgia qlgamhglhv wlldtdptal yranksisss lqrfvskgqi
       61 sqaactealr rleytsnide lrsadfivea ivesedvkkk lfieldkitk ssailasnts
      121 sisitrlasa tsrpcqvigm hfmnpppimk lveivrgadt sdetfhatka laerfhktii
      181 csqdysgfiv nrilmpmine afftlytgva tkedidtamk lgtnhpigpl eladfigldv
      241 clsimkvlha glgdskyapc pllvryvdag rvgrkcgvgv ydyrkgsepm kasprl
//
LOCUS       XP_016742840             484 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 18 [Gossypium hirsutum].
ACCESSION   XP_016742840
VERSION     XP_016742840.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887351.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742840.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..484
                     /product="protein DETOXIFICATION 18"
                     /calculated_mol_wt=52949
     Region          37..469
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(276,280,308,311,390,394,421,447,451)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..484
                     /gene="LOC107952097"
                     /coded_by="XM_016887351.2:300..1754"
                     /db_xref="GeneID:107952097"
ORIGIN      
        1 mspkesyfas aesllsevnh hdddddqqrk rvldmeeakn qvvfslpmiv ssvsflsitm
       61 vsvmfaghlg elqlaaatla nswatvtgla fmtglsgale tlcgqgfgak lyrtlgiylq
      121 ssciiscffs iiisilwfyt epilillqqd aqisaaaaly ikylipglfa ygfvqnilrf
      181 lqtqsilmpl vwfsvlpmgi hlgiayalvy ctemgfkgap laasislwis flllsvyvff
      241 aeefkqtwdg lsfesfrhvp tnlklalpsa amvcleywaf ellvllaglm pnsevntsli
      301 amcvnteaia ymityglsaa astrvsnelg aghpirakna mgvtlrlsil qalavvlala
      361 fghniwaaff snspsiinqf asmtplllis itidsfqgvl sgvargsgwq llamwvnmgt
      421 fyfigmplac llgfkfklya kglwiglicg lscqagalll itlsrkwiki eisedvdret
      481 rifv
//
LOCUS       XP_016743338             463 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 44 [Gossypium hirsutum].
ACCESSION   XP_016743338
VERSION     XP_016743338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887849.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..463
                     /product="serine carboxypeptidase-like 44"
                     /calculated_mol_wt=52130
     Region          30..456
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..463
                     /gene="LOC107952669"
                     /coded_by="XM_016887849.2:38..1429"
                     /db_xref="GeneID:107952669"
ORIGIN      
        1 mgigaffnsl yaflfggilg yhlydqitlp gqpeiefrqf sgyididpda grslfyyfve
       61 aekdpldlpl tiwltggpgc ssvadsfvgi gpftttnnah alkinpyawn kvsnmlfidt
      121 pigsgwsysn tssdyqtgdf stnkdlltff vkwfekypif kfrdlyicgi syaghfvtll
      181 ansllhfnne tkstrfnlkg lalgspvlry kldviaqyel yaskgmishk myhkilkqcn
      241 etdednysnd spewsesceh vmnkalmtaf nvssvreank mrfdivrnpc dgriedliag
      301 keitmvvggi dmcipnrvdf yfgmpevqqa fhgnrthlgy kysgcfqnsg lnysiadqhv
      361 dmlpilkeil ehsvpitifs geddgavpmi gtlrhvkkla semnftltkd eawnsenkeg
      421 grlykfgdll tfmsvkganh hvplskpsqs lyifenhvve qsd
//
LOCUS       XP_040942838             409 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein RF9 [Gossypium hirsutum].
ACCESSION   XP_040942838
VERSION     XP_040942838.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086904.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..409
                     /product="probable disease resistance protein RF9"
                     /calculated_mol_wt=46941
     CDS             1..409
                     /gene="LOC107952488"
                     /coded_by="XM_041086904.1:1599..2828"
                     /db_xref="GeneID:107952488"
ORIGIN      
        1 miphcpsntr avrriavhrh ihvqrikssi plrsilffwh pfdlnlepcl sdeddfcflv
       61 sfvcvmlkwk rswkymfgkf kklrvlsfee ggegysgfkl ssaignliql rclnlcgiaf
      121 nspnipsslg nlrclqtldl rihaddgavn vpniiwkleq lrhylpltmt dktklklhkl
      181 tniltlinfn trncfvadls kftkliklgi lgpfsiddfk eeldknlpii asdclrslsi
      241 wndegidpkv lahllsscvn lcelilrvki eklpdfhhfs sstayvhlig cmlvedpmpt
      301 leklpnlrvm elyvyafigk emvcsalrlp kleslnlsgl rnleewkvee gavpalrhlk
      361 isgceelrnl kikwckeeki stksntflps yfmlstmcei yhffliknl
//
LOCUS       XP_040942839             939 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein At1g50180 [Gossypium hirsutum].
ACCESSION   XP_040942839
VERSION     XP_040942839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086905.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..939
                     /product="putative disease resistance protein At1g50180"
                     /calculated_mol_wt=107451
     Region          4..127
                     /region_name="RX-CC_like"
                     /note="Coiled-coil domain of the potato virux X resistance
                     protein and similar proteins; cd14798"
                     /db_xref="CDD:271353"
     Site            order(68,72,75,99,102,105..107,109..111,113..114)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          180..414
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <620..>834
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          653..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..727
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          728..752
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          755..780
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          781..802
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          803..826
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          827..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          855..875
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          876..895
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..939
                     /gene="LOC107952098"
                     /coded_by="XM_041086905.1:27..2846"
                     /db_xref="GeneID:107952098"
ORIGIN      
        1 mdfsaissvv qtvgrlltqe vtslmgvkdq vedlqkelew iqsflkeada rkvdnevvrt
       61 sineirelay daedviesfa lkvaprrkgg fsnvikrfac ilneggllcq tkceiqkita
      121 ritrltrrlq tydvkqprdg agtsssnqrr elrrpyphiv ddnvvglhdd ikklvsilvd
      181 eesgckvvsi cgmggigktt lakkifrhsq vtghfnrlaw vyvsqqcqkv rvwkdilssl
      241 qivnnadrde elaeilhnfl kdnkclvild diwsidawds lksafpiamd snskllltsr
      301 nkeivphadr rgyylhelqc lnddeswelf qriafshphs tenitdakmk dlgkkmvhqc
      361 aglplaiivl ggilatkssi hewqivhknt ksylkkgkgg aqhiehvlal syddlppylr
      421 pcflylsqfp edyqipaerl iqlwvaeglv sstedegngg evmedvaegf ldelvercmv
      481 qvgerdptlk ietchmhdlm rdlclsiakq enflsiinds slspsntrav rriavhqhih
      541 vqrikssipl rsilffwspf dleseprerd eedfccvvwf vcvmlkwkrs wkymfgkfkk
      601 lrvlsfegdm lgysgcklss aignlihlrf lnicgiefiw skipsslgnl rclqtldlri
      661 sghaddgamn vpniiwkleq lrhlylpmmt dktklklhtl tniltlinfn trncfiadls
      721 kftklrklgi lgpfniddfk eeldknlpii asdclrslsi wndkgidpkv lahllsscvn
      781 lcelilevki eklpdfhhfs ssiayvhlte cklvedpmpt leklpnlrvl elynyafigk
      841 emvcsaphfp klksltlscl wnlekwkveg gampalryle irrceklkml pdglrcivtl
      901 qelkieympk efkdkmvqgr edfykvqhip siifsncdi
//
LOCUS       XP_016742842             513 aa            linear   PLN 06-AUG-2024
DEFINITION  probable bifunctional methylthioribulose-1-phosphate
            dehydratase/enolase-phosphatase E1 [Gossypium hirsutum].
ACCESSION   XP_016742842
VERSION     XP_016742842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887353.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..513
                     /product="probable bifunctional
                     methylthioribulose-1-phosphate
                     dehydratase/enolase-phosphatase E1"
                     /calculated_mol_wt=56632
     Region          21..227
                     /region_name="salvage_mtnB"
                     /note="methylthioribulose-1-phosphate dehydratase;
                     TIGR03328"
                     /db_xref="CDD:274521"
     Site            order(40,62..63,100..102,120,122,195)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(120,122,195)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          273..494
                     /region_name="HAD_EP"
                     /note="Enolase-phosphatase similar to human
                     enolase-phosphatase E1 and and Xanthomonas oryzae pv.
                     Oryzae enolase-phosphatase Xep; cd01629"
                     /db_xref="CDD:319768"
     Site            order(277..281,288,292..293,377,412..414,418,446,471..472,
                     476..477)
                     /site_type="active"
                     /db_xref="CDD:319768"
     CDS             1..513
                     /gene="LOC107952099"
                     /coded_by="XM_016887353.2:309..1850"
                     /db_xref="GeneID:107952099"
ORIGIN      
        1 mgsvsqayle sepvkearsl iselcrqfys lgwvsgtggs itmkvhdssi pkpqqlilms
       61 psgvqkerme pedmyvlsgd gaiisspspk pyphkppkcs dcaplfmkay hmrnagavih
      121 shgmesclat minphlkefr ithmemikgi qghgyydelv ipiientaye neltdslaka
      181 ieaypkttav lvrnhgiyvw gdswisaktq secyhylfda aiklhqlgld wstpdhgsiq
      241 vvkgvpsvdc rmnvskkarl adsncngkpf trcivldieg tttpisyvtd ilfpyaqnnv
      301 grhlsatyas aetqddikll rsqveddlkq gvigavpips edaekeevia alvanveami
      361 kadrkitalk qlqghiwrtg fetnelkgiv fddvpealek whalgvkvyi yssgsrlaqr
      421 llfgntkfgd lrkylsgyfd tavgnkrekr syveitdtlg vdkpseilfl tdiyqeaiaa
      481 kaagmeaiis vrpgnsplpd nhgfktinsf lev
//
LOCUS       XP_016742844             823 aa            linear   PLN 06-AUG-2024
DEFINITION  dynamin-related protein 5A [Gossypium hirsutum].
ACCESSION   XP_016742844
VERSION     XP_016742844.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887355.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742844.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..823
                     /product="dynamin-related protein 5A"
                     /calculated_mol_wt=91647
     Region          54..340
                     /region_name="DLP_1"
                     /note="Dynamin_like protein family includes dynamins and
                     Mx proteins; cd08771"
                     /db_xref="CDD:206738"
     Site            63..70
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206738"
     Site            order(64,66..71,84..85,90,169,239,241..242,266..270,281)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206738"
     Site            order(65..66,173,186,211,213,215..218,220..221,242,
                     244..247,269..270,279)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:206738"
     Site            90
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206738"
     Site            94..96
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206738"
     Site            169..172
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206738"
     Site            order(171..172,202..203)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206738"
     Site            238..241
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206738"
     Site            266..268
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206738"
     CDS             1..823
                     /gene="LOC107952101"
                     /coded_by="XM_016887355.2:69..2540"
                     /db_xref="GeneID:107952101"
ORIGIN      
        1 matptptktp vekskrshsh hhhsrdgssf ssslsrfeay nrlqaaavaf geklpipeiv
       61 alggqsdgks slleallgfr fnvrevemgt rrplilqmvn dpsaleprcr fqeedseeyg
      121 spvvsastia diiksrteal lkktktsvsp kpiimraefa hcpnltiidt pgfvlkakkg
      181 epentpeeil smvkslaspp hrillflqqs svewcsslwl dsireidptf rrtivvvskf
      241 dnrlkefsdr wevdrylnas gylgentrpf fvalpkernt isndefrrqi sqvdaevlrh
      301 lhdgikggyd eekfkpyigf cslreylese lqkrykeaap atlalleqrc sevnielari
      361 dskiqatsdv shlrksammh aayisnhvgv lidgaadpsp eqwgktteee rsesglgswp
      421 gvttdikpan avlrlyggaa fervmhefrc aaysmecppv srekvanill ahagrgggrg
      481 vteaaaeiar taarswlapl ldtacdrlaf vlgnlfdval ernrcresey gkntgnwdgy
      541 vgfhaalrha ynrfikdlak qckqlvrhhl dsvtspysqv cyendfqgvf nstassynky
      601 nqassasycl elsdieqvph deakrdqeni ppeknskqtt pgkgtearea lqetqltvpe
      661 tpspdqpcdv vyarvkkelg ncievgprkr iarmtgnrna eqlakvhngg sllfgngdsg
      721 sktgssysei cssaaqhfar irevlversv tstlnsgflt pcrdrlvval gldlfavnde
      781 kfmdmfiapd aievqhkerq slqkrqkilq sclnefknva ral
//
LOCUS       XP_016742845             794 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At2g19130 [Gossypium hirsutum].
ACCESSION   XP_016742845
VERSION     XP_016742845.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742845.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..794
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At2g19130"
                     /calculated_mol_wt=89030
     Site            order(36..37,39,42,69,79..80,115,122,129,131,133..148,
                     151..157)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(61,64,66,68,70,99,101,103,105,107,133,135,137,139,
                     141)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          77..182
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          215..323
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          343..425
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(362,364,379)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          510..775
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(510..514,518,530,532,560,576..579,583,585,627,629,
                     631..632,634,645,648,665..668)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(510..514,518,530,532,560,576..579,583,627,629,
                     631..632,634,645)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(514,583,585,627,629,631,648,665..668)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(644..651,662,663..668)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..794
                     /gene="LOC107952102"
                     /coded_by="XM_016887356.2:56..2440"
                     /db_xref="GeneID:107952102"
ORIGIN      
        1 mgnrtrlllp lyvlvfsfss fetyvsiemd tlypgqslsg nqtissrngr felgffkpgn
       61 stgyyvgily knlkvktvvw vanrdeplld hsvsklelse kgslvlynqs eipvwsaeps
      121 psntmnstva vledsgnlvl rngsspsvta wesfdhptdt wlpgaklgrs kvskkeliyv
      181 swsspndpsp glfslgldtn gtgwyhilkn girhwtcgyw lqrvssfste tvttnyitmg
      241 yvsnkeenyy fysvttssvl vrflmdvtgk vqqliwkdgs qewetiwekp ketceiyafc
      301 gangacnqfg gpkckclpgf epkipgewkt gnytngchrk sllkcnkdvk hdfqeienir
      361 lppnevltnn kslrecksac lrdcsciayt igyygncsiw redllniqyl tfgdhigrdl
      421 ylrlpmtela askvkkklri erlticaaaa ivilipilvl mswvahsksv tlvstcrman
      481 fsgtkptdda lvlfkfgdlk satknfsekl geggfgsvyk gmlpnsavia vkslkgqdhe
      541 dkqfraevst igtihhvnlv hllgfcwkgt krflvyeymp ngsldshlfy kdskildwkt
      601 rhhialgvar glaylhekcr vciihcdikp enilldadyn pllsdfglak lfgrdfsrvl
      661 ttmkgtrgyl apemisgdpi tpksdvfsyg mllleiisgr rnweikgdet dnyfparaai
      721 cvsnggdvls lldpklqgna naeeviracr vacwciqdee qnrpsmghvv qilegvqein
      781 mppipwfiqt iinf
//
LOCUS       XP_016742846             616 aa            linear   PLN 06-AUG-2024
DEFINITION  proton pump-interactor 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742846
VERSION     XP_016742846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..616
                     /product="proton pump-interactor 1 isoform X1"
                     /calculated_mol_wt=69432
     Region          95..350
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     CDS             1..616
                     /gene="LOC107952103"
                     /coded_by="XM_016887357.2:173..2023"
                     /db_xref="GeneID:107952103"
ORIGIN      
        1 mgveivgsnm aqvsvdkvae vdqsflldke ngkldedpvh netipvvprc eepskgdgnn
       61 asndnfptda vdewpaakqv hsfhfvryrl yedpkikaki deadkelqkw sktrfkitde
      121 lkakrsdrae llaqvralnv dfeqykeild ekkkeieplq qalgklrtns ytgrgsmcss
      181 eeelndvihs lqyriqhesi plaeekqllk eikrlegtre avitnaamra kiqdsmgqke
      241 viqdqvklig vdlsgvrkeq favqskkkqi kdkltatekk leslqeelka vtqkrdkayq
      301 tilelrkqhd eenayfyqsr slinkakiva akkdikalee lanvevekfm dlwngnkafr
      361 ddyerrilks ldtrllsrdg rirnpdekpl vlpevpvhtg tealskpgar qpkeeakssp
      421 qpgtkhpkkg qkdaetkame sksspenvva dkisgssnee vdaakqkemk reeeiakakq
      481 alerkkkqae kaaakaaira qkeaekklke rekkakkkaa asttainpee ptepmaease
      541 sekvdasaea pvpapvsvkd kaqkgnairy rnrtkgpevl prailrrkks tnywtwaapa
      601 alvvlillal gyyylv
//
LOCUS       XP_016742848             607 aa            linear   PLN 06-AUG-2024
DEFINITION  proton pump-interactor 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016742848
VERSION     XP_016742848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..607
                     /product="proton pump-interactor 1 isoform X2"
                     /calculated_mol_wt=68545
     Region          86..341
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     CDS             1..607
                     /gene="LOC107952103"
                     /coded_by="XM_016887359.2:175..1998"
                     /db_xref="GeneID:107952103"
ORIGIN      
        1 maqvsvdkva evdqsflldk engkldedpv hnetipvvpr ceepskgdgn nasndnfptd
       61 avdewpaakq vhsfhfvryr lyedpkikak ideadkelqk wsktrfkitd elkakrsdra
      121 ellaqvraln vdfeqykeil dekkkeiepl qqalgklrtn sytgrgsmcs seeelndvih
      181 slqyriqhes iplaeekqll keikrlegtr eavitnaamr akiqdsmgqk eviqdqvkli
      241 gvdlsgvrke qfavqskkkq ikdkltatek kleslqeelk avtqkrdkay qtilelrkqh
      301 deenayfyqs rslinkakiv aakkdikale elanvevekf mdlwngnkaf rddyerrilk
      361 sldtrllsrd grirnpdekp lvlpevpvht gtealskpga rqpkeeakss pqpgtkhpkk
      421 gqkdaetkam esksspenvv adkisgssne evdaakqkem kreeeiakak qalerkkkqa
      481 ekaaakaair aqkeaekklk erekkakkka aasttainpe eptepmaeas esekvdasae
      541 apvpapvsvk dkaqkgnair yrnrtkgpev lprailrrkk stnywtwaap aalvvlilla
      601 lgyyylv
//
LOCUS       XP_016743339             418 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14B isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016743339
VERSION     XP_016743339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887850.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..418
                     /product="beta-glucuronosyltransferase GlcAT14B isoform
                     X1"
                     /calculated_mol_wt=47510
     Region          1..418
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..418
                     /gene="LOC107952671"
                     /coded_by="XM_016887850.2:294..1550"
                     /db_xref="GeneID:107952671"
ORIGIN      
        1 mmlmimekkw ifpfvitsiv cifflvssln mglvssvhni nsifsifpmg qrkpgyvesk
       61 iesgsplpps gppiprfayl isgskgdlek lwrvlhalyh prnqyvvhld lespaeerlt
      121 lasrtknntm fskmgnvymi tkanmvtyrg ptmvantlha caillkrnkd wdwfinlsas
      181 dyplvtqddl lyafsalnrd lnfiehtsel gwkldkramp liidpglyls tktevvwasq
      241 krklptafkl ftgsawtvls rpfiefiimg wdnlprtllm yytnfisspe gyfqtvvcnv
      301 pkfaktvvnh dmhfikwdnp pkqhphilsl nelgkmimsn aafarkfnqd dpvldkidad
      361 llgrvnvsft pgawcsgklk csevgdinki kpgpgarrlr ylldrlamka ylgqdqcr
//
LOCUS       XP_040942840             418 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14B isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942840
VERSION     XP_040942840.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086906.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..418
                     /product="beta-glucuronosyltransferase GlcAT14B isoform
                     X1"
                     /calculated_mol_wt=47510
     Region          1..418
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..418
                     /gene="LOC107952671"
                     /coded_by="XM_041086906.1:177..1433"
                     /db_xref="GeneID:107952671"
ORIGIN      
        1 mmlmimekkw ifpfvitsiv cifflvssln mglvssvhni nsifsifpmg qrkpgyvesk
       61 iesgsplpps gppiprfayl isgskgdlek lwrvlhalyh prnqyvvhld lespaeerlt
      121 lasrtknntm fskmgnvymi tkanmvtyrg ptmvantlha caillkrnkd wdwfinlsas
      181 dyplvtqddl lyafsalnrd lnfiehtsel gwkldkramp liidpglyls tktevvwasq
      241 krklptafkl ftgsawtvls rpfiefiimg wdnlprtllm yytnfisspe gyfqtvvcnv
      301 pkfaktvvnh dmhfikwdnp pkqhphilsl nelgkmimsn aafarkfnqd dpvldkidad
      361 llgrvnvsft pgawcsgklk csevgdinki kpgpgarrlr ylldrlamka ylgqdqcr
//
LOCUS       XP_040942841             411 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14B isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942841
VERSION     XP_040942841.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086907.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..411
                     /product="beta-glucuronosyltransferase GlcAT14B isoform
                     X2"
                     /calculated_mol_wt=46700
     Region          1..411
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..411
                     /gene="LOC107952671"
                     /coded_by="XM_041086907.1:301..1536"
                     /db_xref="GeneID:107952671"
ORIGIN      
        1 mmlmimekkw ifpfvitsiv cifflvssln mglvssvhni nsifsifpmg qrkpgyvesk
       61 iesgsplpps gppiprfayl isgskgdlek lwrvlhalyh prnqyvvhld lespaeerlt
      121 lasrtknntm fskmgnvymi tkanmvtyrg ptmvantlha caillkrnkd wdwfinlsas
      181 dyplvtqdal nrdlnfieht selgwkldkr ampliidpgl ylstktevvw asqkrklpta
      241 fklftgsawt vlsrpfiefi imgwdnlprt llmyytnfis spegyfqtvv cnvpkfaktv
      301 vnhdmhfikw dnppkqhphi lslnelgkmi msnaafarkf nqddpvldki dadllgrvnv
      361 sftpgawcsg klkcsevgdi nkikpgpgar rlrylldrla mkaylgqdqc r
//
LOCUS       XP_016742850             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742850
VERSION     XP_016742850.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742850.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64113
     Region          204..506
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..566
                     /gene="LOC107952104"
                     /coded_by="XM_016887361.2:479..2179"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkdstsp nvlqrigtlg tvpyvngghh easqilgekd
      121 kkkdenrfqi pafkgasvlp frhpcvnftf pppppptrrr lgprpcpvcy lpvdqaiasm
      181 pssssaspvl hnltyvlnen piksephggs dfggypslkq rndsfdikes mavhcgfikg
      241 skpghgtgfd fdesdlaelq qfhdiivasa ifgnydviqq pqniseeakk nipfymfvde
      301 eteafmknrs ilssskrvgl wrivvvhnvp ysdarrngkv pklllhrifp nvrysiwidg
      361 klqlvvdpyq vlerflwrqn anfaisrhyr rfdvfveaea nkaagkydns sideqvdfyk
      421 iegltpysea klpitsdvpe gcvlikehip itnlftclwf nevdcftsrd qlsfaivrdk
      481 imtkvdwsin mfldcerrnf viqsyhrdll ekmpppvpav vrrppalpnt rgktpgkrip
      541 rrgrdrrsgs srhckaaasn rdrnff
//
LOCUS       XP_016742851             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742851
VERSION     XP_016742851.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887362.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742851.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64113
     Region          204..506
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..566
                     /gene="LOC107952104"
                     /coded_by="XM_016887362.2:940..2640"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkdstsp nvlqrigtlg tvpyvngghh easqilgekd
      121 kkkdenrfqi pafkgasvlp frhpcvnftf pppppptrrr lgprpcpvcy lpvdqaiasm
      181 pssssaspvl hnltyvlnen piksephggs dfggypslkq rndsfdikes mavhcgfikg
      241 skpghgtgfd fdesdlaelq qfhdiivasa ifgnydviqq pqniseeakk nipfymfvde
      301 eteafmknrs ilssskrvgl wrivvvhnvp ysdarrngkv pklllhrifp nvrysiwidg
      361 klqlvvdpyq vlerflwrqn anfaisrhyr rfdvfveaea nkaagkydns sideqvdfyk
      421 iegltpysea klpitsdvpe gcvlikehip itnlftclwf nevdcftsrd qlsfaivrdk
      481 imtkvdwsin mfldcerrnf viqsyhrdll ekmpppvpav vrrppalpnt rgktpgkrip
      541 rrgrdrrsgs srhckaaasn rdrnff
//
LOCUS       XP_016742849             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742849
VERSION     XP_016742849.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742849.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64113
     Region          204..506
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..566
                     /gene="LOC107952104"
                     /coded_by="XM_016887360.2:755..2455"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkdstsp nvlqrigtlg tvpyvngghh easqilgekd
      121 kkkdenrfqi pafkgasvlp frhpcvnftf pppppptrrr lgprpcpvcy lpvdqaiasm
      181 pssssaspvl hnltyvlnen piksephggs dfggypslkq rndsfdikes mavhcgfikg
      241 skpghgtgfd fdesdlaelq qfhdiivasa ifgnydviqq pqniseeakk nipfymfvde
      301 eteafmknrs ilssskrvgl wrivvvhnvp ysdarrngkv pklllhrifp nvrysiwidg
      361 klqlvvdpyq vlerflwrqn anfaisrhyr rfdvfveaea nkaagkydns sideqvdfyk
      421 iegltpysea klpitsdvpe gcvlikehip itnlftclwf nevdcftsrd qlsfaivrdk
      481 imtkvdwsin mfldcerrnf viqsyhrdll ekmpppvpav vrrppalpnt rgktpgkrip
      541 rrgrdrrsgs srhckaaasn rdrnff
//
LOCUS       XP_016742852             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742852
VERSION     XP_016742852.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887363.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742852.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64113
     Region          204..506
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..566
                     /gene="LOC107952104"
                     /coded_by="XM_016887363.2:919..2619"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkdstsp nvlqrigtlg tvpyvngghh easqilgekd
      121 kkkdenrfqi pafkgasvlp frhpcvnftf pppppptrrr lgprpcpvcy lpvdqaiasm
      181 pssssaspvl hnltyvlnen piksephggs dfggypslkq rndsfdikes mavhcgfikg
      241 skpghgtgfd fdesdlaelq qfhdiivasa ifgnydviqq pqniseeakk nipfymfvde
      301 eteafmknrs ilssskrvgl wrivvvhnvp ysdarrngkv pklllhrifp nvrysiwidg
      361 klqlvvdpyq vlerflwrqn anfaisrhyr rfdvfveaea nkaagkydns sideqvdfyk
      421 iegltpysea klpitsdvpe gcvlikehip itnlftclwf nevdcftsrd qlsfaivrdk
      481 imtkvdwsin mfldcerrnf viqsyhrdll ekmpppvpav vrrppalpnt rgktpgkrip
      541 rrgrdrrsgs srhckaaasn rdrnff
//
LOCUS       XP_016742853             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742853
VERSION     XP_016742853.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742853.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64113
     Region          204..506
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..566
                     /gene="LOC107952104"
                     /coded_by="XM_016887364.2:459..2159"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkdstsp nvlqrigtlg tvpyvngghh easqilgekd
      121 kkkdenrfqi pafkgasvlp frhpcvnftf pppppptrrr lgprpcpvcy lpvdqaiasm
      181 pssssaspvl hnltyvlnen piksephggs dfggypslkq rndsfdikes mavhcgfikg
      241 skpghgtgfd fdesdlaelq qfhdiivasa ifgnydviqq pqniseeakk nipfymfvde
      301 eteafmknrs ilssskrvgl wrivvvhnvp ysdarrngkv pklllhrifp nvrysiwidg
      361 klqlvvdpyq vlerflwrqn anfaisrhyr rfdvfveaea nkaagkydns sideqvdfyk
      421 iegltpysea klpitsdvpe gcvlikehip itnlftclwf nevdcftsrd qlsfaivrdk
      481 imtkvdwsin mfldcerrnf viqsyhrdll ekmpppvpav vrrppalpnt rgktpgkrip
      541 rrgrdrrsgs srhckaaasn rdrnff
//
LOCUS       XP_040942842             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942842
VERSION     XP_040942842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086908.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="probable hexosyltransferase MUCI70 isoform X1"
                     /calculated_mol_wt=64113
     Region          204..506
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..566
                     /gene="LOC107952104"
                     /coded_by="XM_041086908.1:318..2018"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkdstsp nvlqrigtlg tvpyvngghh easqilgekd
      121 kkkdenrfqi pafkgasvlp frhpcvnftf pppppptrrr lgprpcpvcy lpvdqaiasm
      181 pssssaspvl hnltyvlnen piksephggs dfggypslkq rndsfdikes mavhcgfikg
      241 skpghgtgfd fdesdlaelq qfhdiivasa ifgnydviqq pqniseeakk nipfymfvde
      301 eteafmknrs ilssskrvgl wrivvvhnvp ysdarrngkv pklllhrifp nvrysiwidg
      361 klqlvvdpyq vlerflwrqn anfaisrhyr rfdvfveaea nkaagkydns sideqvdfyk
      421 iegltpysea klpitsdvpe gcvlikehip itnlftclwf nevdcftsrd qlsfaivrdk
      481 imtkvdwsin mfldcerrnf viqsyhrdll ekmpppvpav vrrppalpnt rgktpgkrip
      541 rrgrdrrsgs srhckaaasn rdrnff
//
LOCUS       XP_016742854             487 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016742854
VERSION     XP_016742854.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742854.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..487
                     /product="probable hexosyltransferase MUCI70 isoform X2"
                     /calculated_mol_wt=55333
     Region          125..427
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..487
                     /gene="LOC107952104"
                     /coded_by="XM_016887365.2:485..1948"
                     /db_xref="GeneID:107952104"
ORIGIN      
        1 mrynewrvsy gllqningai agggvsksls nvrksstkml svirekerpl pnawyryigc
       61 rkfsmlllia fallvfalgs fvvnkacpvc ylpvdqaias mpssssaspv lhnltyvlne
      121 npiksephgg sdfggypslk qrndsfdike smavhcgfik gskpghgtgf dfdesdlael
      181 qqfhdiivas aifgnydviq qpqniseeak knipfymfvd eeteafmknr silssskrvg
      241 lwrivvvhnv pysdarrngk vpklllhrif pnvrysiwid gklqlvvdpy qvlerflwrq
      301 nanfaisrhy rrfdvfveae ankaagkydn ssideqvdfy kiegltpyse aklpitsdvp
      361 egcvlikehi pitnlftclw fnevdcftsr dqlsfaivrd kimtkvdwsi nmfldcerrn
      421 fviqsyhrdl lekmpppvpa vvrrppalpn trgktpgkri prrgrdrrsg ssrhckaaas
      481 nrdrnff
//
LOCUS       XP_016743340             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743340
VERSION     XP_016743340.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887851.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..144
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16136
     CDS             1..144
                     /gene="LOC107952672"
                     /coded_by="XM_016887851.2:386..820"
                     /db_xref="GeneID:107952672"
ORIGIN      
        1 mslpgffiic mlhsmvaitc galmvfytke vsvfghghei asklqgstph dqlliqtsqs
       61 fsglllftig lvlfmvafve drefqsffak gcvllhvsma vwrvcfegkl edlahqwlrq
      121 algdimlsls wvlllacswr ekyd
//
LOCUS       XP_040942843             932 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942843
VERSION     XP_040942843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086909.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=105830
     Region          34..912
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..932
                     /gene="LOC107952106"
                     /coded_by="XM_041086909.1:1394..4192"
                     /db_xref="GeneID:107952106"
ORIGIN      
        1 mkpsiflwlc tlkisllfis lsvkpvssvi dsysdhcltt vpepvpnsep ldyefgpfgp
       61 shsgfyyygn lrvvstnitr ytnsfsfytt evsqtdkdgv lmiegsfelq npfvlhsfly
      121 rvgpsngsvp tphtlpvvad ftnpfilklh gfwskssgel cmvgtgssyf kdgnlltpaa
      181 vlklhnikns snittlitgt lkslspindn nyfepislmt vphlnynftf asgdsgdefs
      241 sesdleenls mynilrgrsf cskfsnlaik dvfnlqytgc rsnkkclpvg gvvqnlpgsi
      301 slgvinctdv gkrvriflkf ddhtklsrld lrfnpnttli gegmwddkkn rlhvllcrfl
      361 gtanswsnah vgdcttrlsl rypailsike tstimgkiwt nktvhdsgyf ekivfrstef
      421 lieglyslky eyteldrvrn ecperkldrn rrqryprpys semkfdmsvr ssegrtargs
      481 adtltvnnqf ckqagiafmv irdddferpt rwepqgrani sykidikwht sqklanqnyi
      541 svvpdekmei taegvydadt gglcmigcrk faltdrvpgn tsidceilln fqlapvkgfe
      601 nggyirgrie strdksddly fdpldvssva ysreqarhti wamdleivmv visqtliclf
      661 lrsqvyhakr hpktlpftsl vmfviltmgq liplvlnyea lfyrkrdqdt mlfqtggwle
      721 vneviirits mvafllqfri lqrafssrsn dgngkglwfa ekmtllvils lygsgalivl
      781 lvdkgnykre ivllptrpvd ywqrstlddl ksfaglisdg fllpqilfnm fsnsreyvls
      841 plfyigtslv rllphaydly cdhtyveykg tfiyvnpaee ffstawdvii pigvllfaat
      901 iylqqqfggr civpkrfrwr esyeeipvvg qs
//
LOCUS       XP_040942844             531 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942844
VERSION     XP_040942844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086910.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..531
                     /product="probable ubiquitin-conjugating enzyme E2 25
                     isoform X2"
                     /calculated_mol_wt=59239
     Region          443..>507
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..531
                     /gene="LOC107952106"
                     /coded_by="XM_041086910.1:49..1644"
                     /db_xref="GeneID:107952106"
ORIGIN      
        1 msstkpppps pppstrrayy ntrnskkrll sttassgffm dpevieippp vpysfksnkk
       61 kqvvihevid vdndgdssdi vildervdvr nkgkavkgss giynaiqaed fvakspgsln
      121 kiepskhstq gshniynldc dltydddffd nyygndfmdv deyailqahf dnvdipagve
      181 asipwfadfs erkkdtspvn tqssvntshs ktqlsangnd qslsswlsep ahmkkaalvs
      241 sssfhnpadp lshspgeviv pstlllpqgs qskksatsql klssqslpfw nsfqpyqvgg
      301 snngsngshs dsmmlpqavn ptylghfssa ankqigagsl nsnfptpidl nhtmvaepsm
      361 pwwpppmkpk ynfnkhnnyt sfpdpvdgvy itsqevadir nqknvneedi lskfqlfkqf
      421 dtvedfsdhh yasggastkq ppknwakkiq eewrilekdl pdtifvrvye srmdllravi
      481 igaegtpyhd glfffdvffp asypkgplyv ivvyefdcil ydhffwymcl d
//
LOCUS       XP_016742857             945 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016742857
VERSION     XP_016742857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..945
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=106711
     Region          55..925
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..945
                     /gene="LOC107952107"
                     /coded_by="XM_016887368.2:1365..4202"
                     /db_xref="GeneID:107952107"
ORIGIN      
        1 myhnfiytsk tdssffqitk amkpsiflwl ctfqisflci sfsvksvssv ahsysdhcys
       61 ivpepvpkse ppvyefgpfg psqsgfyysd gdfrvvtani trhtnlfsfy ttavrqtdkd
      121 gvfmiegsfe fkgllesily gsgssqlsvp prvppavady snpfilklhg fwsessgelc
      181 mvgtgsallq egtlltpvav lklyniktsn sittlitgtl eslspsndnn yfetisilmp
      241 pqlnykftiv sgdsvdeiss esqfeenfpi dsvlqgrsfc skftslvfrn vfnlqytgcr
      301 sskkclpgdg vianlpcsis lsainctdvl krvriflkfd vkhsrhdkrf dpsttligeg
      361 iwddkknqlh fllcrfldie nswsnahvgd cttglslrfp tiwsiketsi imgkiwtnkt
      421 eddsgyfeni vfrstenhmh alpdlkyeyt ehyrvrnlcp ekklgrnrkr rypspnsigm
      481 kfnmlvesse grtgwgsana ltvnsqlyih arlsfasird dfskptrwep qgranisyri
      541 dikwhtppkl tdednasivp dekmeitaeg iydadtgglc migcrkldqp lgnasidcgi
      601 llnfqfapvk glenggyirg eiksireksd llyfdhldvs svaynreqar htiwtmdlei
      661 alvvisqtlv clsvrsqlyh skrhpnrlpf tslvmlvila lgqlsplvln yealfyhknd
      721 qgtvlfqtgg wlkaneviir itsmvaflly frilqqafss rskdgngkgl rfaeemtllv
      781 tlplyvsgai ivllvdrany krdivllpis pvdywqrstl ddlksyagli sdgfllpqil
      841 fnifsnsran alrpsfyigt slvrllphvy dlycdhsyve ykgtfiyanp aenffstvwd
      901 viipigvllf aaiiylqqqf ggccivpkrf rwsesyenip mvses
//
LOCUS       XP_016742858             822 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016742858
VERSION     XP_016742858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..822
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=92707
     Region          2..802
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..822
                     /gene="LOC107952107"
                     /coded_by="XM_016887369.2:847..3315"
                     /db_xref="GeneID:107952107"
ORIGIN      
        1 miegsfefkg llesilygsg ssqlsvpprv ppavadysnp filklhgfws essgelcmvg
       61 tgsallqegt lltpvavlkl yniktsnsit tlitgtlesl spsndnnyfe tisilmppql
      121 nykftivsgd svdeissesq feenfpidsv lqgrsfcskf tslvfrnvfn lqytgcrssk
      181 kclpgdgvia nlpcsislsa inctdvlkrv riflkfdvkh srhdkrfdps ttligegiwd
      241 dkknqlhfll crfldiensw snahvgdctt glslrfptiw siketsiimg kiwtnktedd
      301 sgyfenivfr stenhmhalp dlkyeytehy rvrnlcpekk lgrnrkrryp spnsigmkfn
      361 mlvessegrt gwgsanaltv nsqlyiharl sfasirddfs kptrwepqgr anisyridik
      421 whtppkltde dnasivpdek meitaegiyd adtgglcmig crkldqplgn asidcgilln
      481 fqfapvkgle nggyirgeik sireksdlly fdhldvssva ynreqarhti wtmdleialv
      541 visqtlvcls vrsqlyhskr hpnrlpftsl vmlvilalgq lsplvlnyea lfyhkndqgt
      601 vlfqtggwlk aneviirits mvafllyfri lqqafssrsk dgngkglrfa eemtllvtlp
      661 lyvsgaiivl lvdranykrd ivllpispvd ywqrstlddl ksyaglisdg fllpqilfni
      721 fsnsranalr psfyigtslv rllphvydly cdhsyveykg tfiyanpaen ffstvwdvii
      781 pigvllfaai iylqqqfggc civpkrfrws esyenipmvs es
//
LOCUS       XP_016742859             673 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016742859
VERSION     XP_016742859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..673
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=76546
     Region          <26..653
                     /region_name="DUF2921"
                     /note="Protein of unknown function (DUF2921); pfam11145"
                     /db_xref="CDD:431679"
     CDS             1..673
                     /gene="LOC107952107"
                     /coded_by="XM_016887370.2:152..2173"
                     /db_xref="GeneID:107952107"
ORIGIN      
        1 masgpnlqgn fvwleqvlhc ykkytgcrss kkclpgdgvi anlpcsisls ainctdvlkr
       61 vriflkfdvk hsrhdkrfdp sttligegiw ddkknqlhfl lcrfldiens wsnahvgdct
      121 tglslrfpti wsiketsiim gkiwtnkted dsgyfenivf rstenhmhal pdlkyeyteh
      181 yrvrnlcpek klgrnrkrry pspnsigmkf nmlvessegr tgwgsanalt vnsqlyihar
      241 lsfasirddf skptrwepqg ranisyridi kwhtppkltd ednasivpde kmeitaegiy
      301 dadtgglcmi gcrkldqplg nasidcgill nfqfapvkgl enggyirgei ksireksdll
      361 yfdhldvssv aynreqarht iwtmdleial vvisqtlvcl svrsqlyhsk rhpnrlpfts
      421 lvmlvilalg qlsplvlnye alfyhkndqg tvlfqtggwl kaneviirit smvafllyfr
      481 ilqqafssrs kdgngkglrf aeemtllvtl plyvsgaiiv llvdranykr divllpispv
      541 dywqrstldd lksyaglisd gfllpqilfn ifsnsranal rpsfyigtsl vrllphvydl
      601 ycdhsyveyk gtfiyanpae nffstvwdvi ipigvllfaa iiylqqqfgg ccivpkrfrw
      661 sesyenipmv ses
//
LOCUS       XP_016742861             180 aa            linear   PLN 06-AUG-2024
DEFINITION  putative RING-H2 finger protein ATL19 [Gossypium hirsutum].
ACCESSION   XP_016742861
VERSION     XP_016742861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887372.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="putative RING-H2 finger protein ATL19"
                     /calculated_mol_wt=20301
     Region          <67..177
                     /region_name="COG5540"
                     /note="RING-finger-containing ubiquitin ligase
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:227827"
     Region          134..177
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            162..167
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..180
                     /gene="LOC107952109"
                     /coded_by="XM_016887372.2:225..767"
                     /db_xref="GeneID:107952109"
ORIGIN      
        1 mrmitlsfaf hslnlpliis sltalgiaiv llscivgaci iatsfvfifi yviceclswp
       61 ifeklfsdil rrgihrvrta tyraiivnyv qpldmlegfp esingrlllr qqalekllpp
      121 maygvdkhal kssecpicld dyvvgescrv fpdckhmfhl scidhwlknh ltcpvcrkci
//
LOCUS       XP_016742862             546 aa            linear   PLN 06-AUG-2024
DEFINITION  terminal nucleotidyltransferase 4A [Gossypium hirsutum].
ACCESSION   XP_016742862
VERSION     XP_016742862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887373.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..546
                     /product="terminal nucleotidyltransferase 4A"
                     /calculated_mol_wt=60529
     Region          3..>109
                     /region_name="SP6-9_N"
                     /note="N-terminal domains of transcription factor
                     Specificity Proteins (SP) 6-9, and similar proteins;
                     cl41771"
                     /db_xref="CDD:425402"
     Region          123..>394
                     /region_name="TRF4"
                     /note="DNA polymerase sigma [Replication, recombination
                     and repair]; COG5260"
                     /db_xref="CDD:227585"
     CDS             1..546
                     /gene="LOC107952110"
                     /coded_by="XM_016887373.2:182..1822"
                     /db_xref="GeneID:107952110"
ORIGIN      
        1 mepqtptnsq pvlyetltln pislpsspta esppsnqspv epytvfrnei slsaentisv
       61 dsaapdyfsl dvnepdepvv irapvsawde pepktpgpad eprlenkwwf rgnsrfqspm
      121 lqlhkeivdf cdflsptpee qaardaavhs vfdvikyiwp acrpevfgsf rtglylptsd
      181 idvvilesgi knpqtglyal sralsqrgia kkmqviakar vpiikfvekk sgvafdisfd
      241 vdngpkaaef ikeavlkwpq lrplclilkv flqqrdlnev ysggigsyal lamiiamlqn
      301 lsesracpeh nlgmllvhff dfygrklntv dvgvsckerg tfflksskgf sskgrpflis
      361 iedpqtpdnd igknsfnyiq irsafgmals nlsnpknila lgpnrsilgt iirpdpvlle
      421 rkggpsgdvt fsnllpgage plqtlngekq dilcnwqfdd eeplprgngn agdvsaqssg
      481 rkrkssskgr hkkkkikenv dvtkdwdeet flkkekssrk kssrhshkhk dsngygyhhg
      541 gaswsr
//
LOCUS       XP_016743341             117 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DOWN-REGULATED IN DIF1 11 [Gossypium hirsutum].
ACCESSION   XP_016743341
VERSION     XP_016743341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="protein DOWN-REGULATED IN DIF1 11"
                     /calculated_mol_wt=12700
     Region          37..102
                     /region_name="Prolamin_like"
                     /note="Prolamin-like; pfam05617"
                     /db_xref="CDD:461693"
     CDS             1..117
                     /gene="LOC107952673"
                     /coded_by="XM_016887852.2:55..408"
                     /db_xref="GeneID:107952673"
ORIGIN      
        1 maslnvyaal vilaialsga vivdsvkths cgnmtlrcid evytsifrng tvsdecchkl
       61 vkigrpchea lvrrdledpf fknhtnikqe ilskakqiwn kctsivdavs vspnasp
//
LOCUS       XP_040942845            1238 aa            linear   PLN 06-AUG-2024
DEFINITION  TMV resistance protein N isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942845
VERSION     XP_040942845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086911.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1238
                     /product="TMV resistance protein N isoform X1"
                     /calculated_mol_wt=140065
     Region          30..1129
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          712..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          736..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..829
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          830..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          878..902
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          903..925
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1238
                     /gene="LOC107917176"
                     /coded_by="XM_041086911.1:190..3906"
                     /db_xref="GeneID:107917176"
ORIGIN      
        1 mvrfdnetss ssssssssle ssssvsrgky dvflsfrged trqnftdhly aafkrrgiit
       61 frddekletg eaiapelfka iheswcsviv lsdgycfssw cleelseiiq qknakghnvf
      121 pifyyvdpsd lrkqtgkvqe aflkhennfe dnkektqrwr saltqvanik gwhlsnrhes
      181 eligeiiekv stklcqtfas aptdmigies rleelhckig igeeddsvqi igicgmgglg
      241 kttlarfvya qisspfegks fladvrevae khglvylqkq llsqifpees fnffnvhdgn
      301 diisrmlshk kifvviddvd niqhlkclig krgwfglgsr iiittrdehl lqiygvddvy
      361 nptklnakea lrlfslkafk setpameffe lskrvveyan glplalevfg sflsgrsdea
      421 qwrsaikrlk kesnkeildr lqisfdgleq sekdifldia cffkgedkdm vtkildgcgf
      481 fpdigidvli kkslvtided nklsmhdllq emgrkivyqe spnepgkrsr lweekdtdyv
      541 lientateav qglvidsirk qntwtlsada fltmkrlrlp kvfnvpnsrg fkylsnelrl
      601 lewhgypfks fpssfqpenl valllpysri eklwkpnmal yklklvdlks sknlvktpdf
      661 smapnlesli legtgiadfh psirflrrlk llnlricksl rsfpskigkq sletlillgc
      721 snikwipevv gemeclkklh ldgtginelp ssighlrslv llnlkdcckl enipssidgc
      781 efltnlvlsg csklenlpen lqqikslekl dlsgiaittp psfifymknm kflsfrgckg
      841 ppsrvraywp fissatkgps wdckslrlpa ilsglstlre ldlidcnlde gvipndicsl
      901 ssleilqlsd nnfitlpatl gglsklttlv ltdckrlksl pelsaglelw idgcaslevv
      961 apsttafpsg vngyicavnc fklaednnav ailktrlklv anarteryni vipgseipkw
     1021 fssqtddssk siikielppn flndtqflgf afcclffsdf nnkprrvehi sytfvihgrn
     1081 fsrefrtdyf hlegkstrvi edhlwiqylp hndidllslv eleceeievs gsstdmlker
     1141 feievafeiw ginsmvkkcr arivyeedle emdqtihehs gstssnfddm hsnsgsngnn
     1201 ngafvkrkwl ntkagdqrnk tlfcdgcqsy vvnhrllv
//
LOCUS       XP_040942846            1209 aa            linear   PLN 06-AUG-2024
DEFINITION  TMV resistance protein N isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942846
VERSION     XP_040942846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086912.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1209
                     /product="TMV resistance protein N isoform X2"
                     /calculated_mol_wt=136665
     Region          30..1077
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          712..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          736..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..829
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          830..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          878..902
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          903..925
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1209
                     /gene="LOC107917176"
                     /coded_by="XM_041086912.1:190..3819"
                     /db_xref="GeneID:107917176"
ORIGIN      
        1 mvrfdnetss ssssssssle ssssvsrgky dvflsfrged trqnftdhly aafkrrgiit
       61 frddekletg eaiapelfka iheswcsviv lsdgycfssw cleelseiiq qknakghnvf
      121 pifyyvdpsd lrkqtgkvqe aflkhennfe dnkektqrwr saltqvanik gwhlsnrhes
      181 eligeiiekv stklcqtfas aptdmigies rleelhckig igeeddsvqi igicgmgglg
      241 kttlarfvya qisspfegks fladvrevae khglvylqkq llsqifpees fnffnvhdgn
      301 diisrmlshk kifvviddvd niqhlkclig krgwfglgsr iiittrdehl lqiygvddvy
      361 nptklnakea lrlfslkafk setpameffe lskrvveyan glplalevfg sflsgrsdea
      421 qwrsaikrlk kesnkeildr lqisfdgleq sekdifldia cffkgedkdm vtkildgcgf
      481 fpdigidvli kkslvtided nklsmhdllq emgrkivyqe spnepgkrsr lweekdtdyv
      541 lientateav qglvidsirk qntwtlsada fltmkrlrlp kvfnvpnsrg fkylsnelrl
      601 lewhgypfks fpssfqpenl valllpysri eklwkpnmal yklklvdlks sknlvktpdf
      661 smapnlesli legtgiadfh psirflrrlk llnlricksl rsfpskigkq sletlillgc
      721 snikwipevv gemeclkklh ldgtginelp ssighlrslv llnlkdcckl enipssidgc
      781 efltnlvlsg csklenlpen lqqikslekl dlsgiaittp psfifymknm kflsfrgckg
      841 ppsrvraywp fissatkgps wdckslrlpa ilsglstlre ldlidcnlde gvipndicsl
      901 ssleilqlsd nnfitlpatl gglsklttlv ltdckrlksl pelsaglelw idgcaslevv
      961 apsttafpsg vngyicavnc fklaednnav ailktrlklv anarteryni vipgseipkw
     1021 fssqtddssk siikielppn flndtqflgf afcclffsdf nnkprrvehi sytfvihgrn
     1081 fsrefrtdyf hleeceeiev sgsstdmlke rfeievafei wginsmvkkc rarivyeedl
     1141 eemdqtiheh sgstssnfdd mhsnsgsngn nngafvkrkw lntkagdqrn ktlfcdgcqs
     1201 yvvnhrllv
//
LOCUS       XP_016703194            1238 aa            linear   PLN 06-AUG-2024
DEFINITION  TMV resistance protein N [Gossypium hirsutum].
ACCESSION   XP_016703194
VERSION     XP_016703194.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847705.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703194.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1238
                     /product="TMV resistance protein N"
                     /calculated_mol_wt=140422
     Region          30..919
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          666..686
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          736..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..829
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          830..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <862..>1039
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          878..902
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          903..925
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1012..1170
                     /region_name="C-JID"
                     /note="C-JID domain; pfam20160"
                     /db_xref="CDD:466313"
     CDS             1..1238
                     /gene="LOC107918177"
                     /coded_by="XM_016847705.2:214..3930"
                     /db_xref="GeneID:107918177"
ORIGIN      
        1 mvrfdnetss ssssssssle ssssvsrgky dvflsfrged trrnftdhly aafkrrgitt
       61 frddekletg epiapelfka iheswcsviv lsegycfssw clqelseiiq qkndkghkvf
      121 pifyyvdpsd lrkqtgkvle aflkhennfq dnkektqrwr saltqvanik gwhlsnrhes
      181 eligeiiekv stklcqtfas apndmigies rleelnckig igeeddsvri igicgmgglg
      241 kttlarfvyt qisshfegqs fladvrevae khglvylqkq llsqifpees fnffnvhdgn
      301 diisrmlshk kifvviddvd niqhlkclig rrawfglgsr iiittrdehl lqiygvddmy
      361 npmklnakea lrlfslkafk setpameffe lskrvveyan glplalevfg sflsgrsdea
      421 qwrsaierlk kesnkeildr lqisfdglek sekdifldia cffkgedkdm vtkildgcgf
      481 fpdigidvli kkslvtided nklsmhdllq emgrkivyqe spnepgkrsr lwdekdtnyv
      541 ligntatevv qglvidsirk qntwtfsada fltmnrlrll rvfnvpnscd fkylsnelrl
      601 lewhgypfks fpssfqpenl valllpysri eklwkpnmpl fklklvdlkg cknlvktpdf
      661 smapnlesli legtaivdid ptvkflrrlk llnlrnckrl rifpskigng slqtlilsgc
      721 snidripeiv gemeclkelc ldgtgikelp ssighlrslm llnlkdcskl eslpssiggc
      781 eflktlllsg csklknfpes lrqlesleel nlsetaittp psfifhlknl kflsfqgckg
      841 ppyrvrshwr fisrptqrls tnsmtlklpv ilsglsslke lnlddcnlnd gaipndicsl
      901 ssleilqlsd nnfitlpatl srlskltslv ltdckrlksl pelpasiklw idgcasleav
      961 ansttafpsr vngyicafnc fklaegndav tmlktrlklv anarteryyi vipgsaipkw
     1021 fssqtddssk siikmqlppn flndtqflgf afscvffsdf nnkprrgdhi syafvihgrn
     1081 fsgefqtvyf hlegkstrvt kdhlwihylp rnyidllslv elecketevs gsstdmlker
     1141 feievafeiw ginsmvkkcg arivyeedle emdqtihehs gstssnfddm hsnsgsngnn
     1201 ngalvkrkwl nakagdqrnk tlfcrfcqsy vvnhrlls
//
LOCUS       XP_016703195            1005 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance-like protein DSC1 [Gossypium hirsutum].
ACCESSION   XP_016703195
VERSION     XP_016703195.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847706.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703195.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1005
                     /product="disease resistance-like protein DSC1"
                     /calculated_mol_wt=113367
     Region          1..834
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          416..438
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          439..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          508..531
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          532..554
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          555..578
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          579..602
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          603..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..698
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          699..721
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          808..966
                     /region_name="C-JID"
                     /note="C-JID domain; pfam20160"
                     /db_xref="CDD:466313"
     CDS             1..1005
                     /gene="LOC107918178"
                     /coded_by="XM_016847706.2:316..3333"
                     /db_xref="GeneID:107918178"
ORIGIN      
        1 migiksrlee lqckigigee ddsvqiigic gmgglgkttl arfvyaqiss pfegksflad
       61 vrevaekhgl vylqkqllsq ifpeesfkfa nvhdgndiis rmlshkkifi viddvdniqh
      121 lkcligrraw fglgsriiit trdehllqiy gvddvynptk lnakealrlf slkafksetp
      181 ameffelskr vveyanglpl alevfgsfls grsdeaqwrs aikrlkkesn keildrlqis
      241 fdgleqsekd ifldiacffk gedkdmvtki ldgcgffpdi gidvlikksl vtidednkls
      301 mhdllqemgr kivyqespne pgkrsrlwee kdtdyvlien tateavqglv idsirkqstw
      361 tlnadafltm nrlrllrvfn vpnsrdfkyl snelrllewh gypfksfpss fqpenlvell
      421 lpysrieklw kpnmalyklk lvdlkgsknl vktpdfsmap nleslilegt givdfdptvk
      481 flrrlkllnl rnckrlrifp skigngslqt lilsgcsnid ripeivgeme clkelcldgt
      541 gikelpssig hlrslmllnl kdcskleslp ssiggceflk tlllsgcskl knfpeslrql
      601 esleelnlse taittppsfi fhmknlkfls fqgckgppyr vrshwrfist paprlstnsm
      661 tlklpvilsg lsslkelnld dcnlndgaip ddiirlssle alrisdnnfr tlpttlggls
      721 klttlvltdc krlkslpelp aslklwldgc gsleavanst tafnsrvtgy icafncfkla
      781 egndvvtmlk trlklvanar terynivipg seipkwfssq tddssksiik mplppnflnd
      841 tqflgfafsc vffsdfnnkp rrgdhisyaf vihgrnfsge fqtvyfhleg kstrvtkdhl
      901 wihylprnyi dllslvelec ketevsgsst dmlkerfeie vafeiwgins mvkkcgariv
      961 yeedleemdq tihehsgsts snfddmhsns gsngnnngal vkrng
//
LOCUS       XP_016702629             241 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein arginine N-methyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016702629
VERSION     XP_016702629.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702629.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..241
                     /product="probable protein arginine N-methyltransferase 1"
                     /calculated_mol_wt=27348
     CDS             1..241
                     /gene="LOC107917810"
                     /coded_by="XM_016847140.2:16..741"
                     /db_xref="GeneID:107917810"
ORIGIN      
        1 msssleqfts llfrvvnglg llnlflllli kaklllgsyk lhslqskflf lhpcqvddgv
       61 vlpdeaslyl taiedaeykd dkiefwnnvy gfdmscikkq ammeplvdtv dqkqivtnch
      121 llktmdiskm vlgdasftap fkliaerddy vhafvayfdv sftkchklmg fstgpisrat
      181 hwkqtvlyle dvltiyeget iigsmtvapn kknprdvdim vkyslsgrrc vvsrvqfykm
      241 r
//
LOCUS       XP_040942847             164 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid oxidation complex subunit alpha [Gossypium hirsutum].
ACCESSION   XP_040942847
VERSION     XP_040942847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086913.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="fatty acid oxidation complex subunit alpha"
                     /calculated_mol_wt=18294
     Region          <89..154
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
     CDS             1..164
                     /gene="LOC107913066"
                     /coded_by="XM_041086913.1:1..495"
                     /db_xref="GeneID:107913066"
ORIGIN      
        1 mllqftlpvl psqsssfqlp pisplpqiri pnpmpdcppp fflnskinlh lqhqststdp
       61 ppvlhgsthf qnqrlersyk rllplnfkvt deeitkmvlf ptineacrvl degvvarasd
      121 ldvasvlgms fpsycfgcsg gimfwadtvg skhiylslkk wser
//
LOCUS       XP_016702632             120 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoinositide phospholipase C 5 [Gossypium hirsutum].
ACCESSION   XP_016702632
VERSION     XP_016702632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="phosphoinositide phospholipase C 5"
                     /calculated_mol_wt=13228
     Region          6..>96
                     /region_name="PLN02952"
                     /note="phosphoinositide phospholipase C"
                     /db_xref="CDD:178538"
     CDS             1..120
                     /gene="LOC107917811"
                     /coded_by="XM_016847143.2:1152..1514"
                     /db_xref="GeneID:107917811"
ORIGIN      
        1 mqnnikkkkl ieaapppdvi aafekyaegg pqmtaeqlhr flvdaqgqgg akvsdaeeil
       61 lqglqkrhhm akfrkhaltl ddfhhylfsa nlnlpidnka slaftslvia aiptlfqqkl
//
LOCUS       XP_040942848             771 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance-like protein DSC1 [Gossypium hirsutum].
ACCESSION   XP_040942848
VERSION     XP_040942848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086914.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..771
                     /product="disease resistance-like protein DSC1"
                     /calculated_mol_wt=87318
     Region          <14..569
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          290..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          314..337
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          338..360
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          361..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          409..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          434..456
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          543..700
                     /region_name="C-JID"
                     /note="C-JID domain; pfam20160"
                     /db_xref="CDD:466313"
     CDS             1..771
                     /gene="LOC107917638"
                     /coded_by="XM_041086914.1:8..2323"
                     /db_xref="GeneID:107917638"
ORIGIN      
        1 mvtkildgcg ffpdigidvl ikkslvtide dnklsmhdll qdmgrkivyq espnepgkrs
       61 rlwnekdkny vlientatea vqglvidsir kqntwtlsad afltmnrlrl lrvfnvpnsr
      121 gfkylsnelr llewhgypfk sfpssfqpen lvalllpysr ieklwkpnmp lyklklvdlk
      181 gsknlvktpd fsmapnlesl ilegtgmvdf dptvkflrrl kllnlrnckr lrifpskign
      241 gsletlilsg csnieripei vgemeclkel cldgtgikel pssighlrrl mllnlkdcsk
      301 leslpssigg ceflktlils gcsklknfpe slqqleslee lnlsetaitt ppsfifhmkn
      361 lkflslqgck gppyrvrsrw rfisrptqrl ssnsmtltlp ailsglsslk elnlddcnly
      421 dgaipvdiir lsslealrls dnnfrtlptt lgglskltsl vltnckrlks lpelpasikl
      481 wldgcgslea vansttafns rvdgyicafn cfklaegnda vamlkrciqe gakvrttnyd
      541 iiipgseipk wftnqtddps dsiikiqlpp rfligrqlvg fafccvffsn fdnkprrgeh
      601 ishasvihgr nfsrefgryd fhlegkstrv gedhlwlhfm pcnqlrlfsl afeckgkeis
      661 efityvvkes seievffkir gihskqkkcg vrmvykqdle emdqtgdeqq irpassnfsd
      721 assnnrstgn nisspierkw lndkaslqwt kpffcrdcqa yigndrlltq f
//
LOCUS       XP_016701552             258 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RMA3 [Gossypium hirsutum].
ACCESSION   XP_016701552
VERSION     XP_016701552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="E3 ubiquitin-protein ligase RMA3"
                     /calculated_mol_wt=29095
     Region          <12..68
                     /region_name="COG5152"
                     /note="Uncharacterized conserved protein, contains RING
                     and CCCH-type Zn-fingers [General function prediction
                     only]"
                     /db_xref="CDD:227481"
     Region          43..258
                     /region_name="PLN03208"
                     /note="E3 ubiquitin-protein ligase RMA2; Provisional"
                     /db_xref="CDD:178747"
     CDS             1..258
                     /gene="LOC107916713"
                     /coded_by="XM_016846063.2:593..1369"
                     /db_xref="GeneID:107916713"
ORIGIN      
        1 mamepnffeq eshfesdrdi slknkwnpis eptkdlekds scfdcsicfe saqepvvtlc
       61 ghlycwpciy kwlnvqtssl dtdprqkncp vckasissgs lvplyghgts shsqpknphs
      121 dlnipqrppp stsnmtapss hlnqqlhenf fhsqsqafhn qqyfppyggy atlassdlsg
      181 ipmtnffhpm igtlgemvya rifgssntsm faypnqasyp lirnnnlrmr rqeiqvdksl
      241 srvsmflfcc iilclllf
//
LOCUS       XP_016702444             252 aa            linear   PLN 06-AUG-2024
DEFINITION  expansin-A12 [Gossypium hirsutum].
ACCESSION   XP_016702444
VERSION     XP_016702444.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702444.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="expansin-A12"
                     /calculated_mol_wt=27848
     Region          14..251
                     /region_name="PLN00193"
                     /note="expansin-A; Provisional"
                     /db_xref="CDD:215097"
     CDS             1..252
                     /gene="LOC107917651"
                     /coded_by="XM_016846955.2:43..801"
                     /db_xref="GeneID:107917651"
ORIGIN      
        1 mgpfiipfvk vwllffivgt ifgavngwfn ahatfygadq spfslggacg ydntlhagfg
       61 antaalsgal frdgeacgac yqlrcdyrad pkwclrrasv titatnfcps nnnggwcnpp
      121 hhhfdmslpa flriarhgde givpvlyrrv pckrrggvrf tlkgqssfnm vmitnvggsg
      181 nvkaawirgs rtstwlpmnr nwganwqssi dlrnqrlsfk ltlvdgktle flnvvpstwk
      241 fgqtfastrq ff
//
LOCUS       XP_016702046             507 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016702046
VERSION     XP_016702046.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846557.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702046.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..507
                     /product="pentatricopeptide repeat-containing protein
                     At4g21705, mitochondrial"
                     /calculated_mol_wt=58061
     Region          112..134
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          140..169
                     /region_name="PPR"
                     /note="PPR repeat; pfam01535"
                     /db_xref="CDD:366695"
     Region          140..167
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          173..202
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          176..218
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          208..234
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          244..273
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          249..477
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          281..307
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          313..340
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          343..377
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          385..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          423..452
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          457..484
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..507
                     /gene="LOC107917182"
                     /coded_by="XM_016846557.2:104..1627"
                     /db_xref="GeneID:107917182"
ORIGIN      
        1 masrtlftil nnkktktlta dwlvmtrayc vapnpanins lysrinaigd pncsvtpvlq
       61 qwvkgknvke fqlqrlirdl rsrrrythal evskwmsssd lefsssdyav qldligrvng
      121 ltaaknffss lrdqdktvkt ygallncyvr vglideslsl mkkmkemgfl ssplnynnlm
      181 clythrgqfe kvpdvllemk mngvspdkfs ykicinsyga radydimekv lqemdsqrdi
      241 qmdwctysla anyyikaglk ekalhylkec ekkvgndaeg ydhlisfyar lgnkdelkrl
      301 wdlqkskcrk qtnknyivml gslvklgele eteklidewe lscktydfrv pnvlligycq
      361 kdlvekaeak lqdvikrrki aipnswsiva tgymnknkme kafecfkeal amqtqnrgwk
      421 pkaglissil swlgengeve daeafvkllr tkvpvnremy hallkayirn gkevegllvs
      481 mkddkideng dtmkilslqd qnsevtg
//
LOCUS       XP_016701743             787 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g31840
            [Gossypium hirsutum].
ACCESSION   XP_016701743
VERSION     XP_016701743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846254.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..787
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g31840"
                     /calculated_mol_wt=88518
     Region          66..111
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          117..145
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          184..211
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          202..262
                     /region_name="PPR_3"
                     /note="Pentatricopeptide repeat domain; pfam13812"
                     /db_xref="CDD:316342"
     Region          219..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          254..281
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          258..>767
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          287..316
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          322..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          359..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          392..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..488
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          499..526
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          534..561
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          569..596
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          604..631
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          636..665
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          671..700
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          741..767
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..787
                     /gene="LOC107916883"
                     /coded_by="XM_016846254.2:121..2484"
                     /db_xref="GeneID:107916883"
ORIGIN      
        1 mlsskmlkkp fsssstktll diisqqkhpi asikpilltl kskpnfalnf fkwsqsfsks
       61 phglpsycal ihiflchrmf gaaaqvfeem mdhvdtnidv ldafnegfrd fgsnpnvvfr
      121 fllesyskng kldmaflvfm emakrrlyis nnlvfrmlns lmnancvdny gefcrffrtr
      181 gfcvygivme gllknrkigm alifhekmil kgievdivac nkilkglavn keigiasklf
      241 dviltfgplp nvvtfstlin myckdgkldt afeiynvmik rnvipdlily silidgyfka
      301 grldegekll svaldrgikl dlvvfslald aygkvgdlgr vvqvykrmle edlspnmvsy
      361 silisglfgn grmleacgif gqiikrgfep slitysslid gfckmgnlkd gfhlfddmie
      421 kghqpdvvvy nvllhglckk gmarsalrff fnsvskglks nififnslmd gycrlkqlrn
      481 avkvymlmgi ysvkpdivty tllvrgaskq gkldaallvf fqmlkrgfpg daityctlmd
      541 gfckhknpta glqifklmqt ngvipdiavy nvllnmllkd shleeasklf sqlvekgpkp
      601 dvityntmic gycslqrlde aislfqqlts lfgpnsitft ilidafckeg rmdgamsmfs
      661 kmlekgpepn vvtygclidg yfksqdmrta telheemlen qispnivsys ilidgfckqg
      721 lmleaslafc caldrrllpd vvaysilirg yckvgrlvea kllceqmfme gvmpddller
      781 tlveynl
//
LOCUS       XP_040942849             519 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP736A12 [Gossypium hirsutum].
ACCESSION   XP_040942849
VERSION     XP_040942849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086915.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="cytochrome P450 CYP736A12"
                     /calculated_mol_wt=58615
     Region          77..509
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(114,139,143,151,198,316,319..320,323..324,383,
                     387..388,390,451..454,457..461,464..465)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(220,224,248,315,318..319,388)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..519
                     /gene="LOC107917077"
                     /coded_by="XM_041086915.1:72..1631"
                     /db_xref="GeneID:107917077"
ORIGIN      
        1 mttsycdwlp sqmssstltl lfvllgtlcs fiyffsspnr nkngrklppg paplpiigni
       61 hmlgnlphhs lhylaekygp imsimlgkvp tivvsspeaa elflkvhdvv fasrpkvqsa
      121 kylayggkav gftqygsywr tvrkwcilhf lsaskvecfa pirkaevgll vesvrkvaaa
      181 getinlsqav akvleemmsk vlfgrsmddk iyfkplvdea lhlsgvfnls dyvpflapld
      241 lqgytrrlkk vssglheffe kmideyqqgi nmddqkpyrs ffqvmvslld tpinpndkdq
      301 pyiigrenik aimvdmvaas fdttstaiew tftellkhpr vmvalqkele svvgrnrmve
      361 esdlpklayl dmvikesfrl hpaapllvph estedvtvng yfipkksrll vntwsmgrnp
      421 kiwssnaeef fperfkdrki dlrghdfeli pfgtgrrgcp gmqlalismr lilaqlahcf
      481 dwelpdgmlp ieldmtekfg lslpranhll vkptyrlia
//
LOCUS       XP_016701967             519 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP736A12 [Gossypium hirsutum].
ACCESSION   XP_016701967
VERSION     XP_016701967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="cytochrome P450 CYP736A12"
                     /calculated_mol_wt=58578
     Region          77..509
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(114,139,143,151,198,316,319..320,323..324,383,
                     387..388,390,451..454,457..461,464..465)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(220,224,248,315,318..319,388)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..519
                     /gene="LOC107917095"
                     /coded_by="XM_016846478.2:90..1649"
                     /db_xref="GeneID:107917095"
ORIGIN      
        1 maisycdwlp sqmssstltl lfvllgtlcs fiyffsspnr nkngrklppg paplpiigni
       61 hmlgnlphqs lhylakkygp imsimlgkvp tivvsspeaa elflkvhdvv fasrpkvqsa
      121 kyfayggkav aftqygsywr tvrkwcilhf lsaskvecfa pirkaevgll vesvrkvaaa
      181 getinlsqav akvleemmsk vlfgrsmddk idfkplvdea mhlsgvfnls dyvpflapld
      241 lqgytrrlkk vssglheffd kmideyqqgi nmddqkpyrs ffqvmvslld tpmnpndedq
      301 pyivgrenik aimvdmvaas fdttttaiew tftelvrhpr vmvalqkele svvgrnrmve
      361 esdlpklayl dtvikesfrl hpvgpllvph estedvtvng yfipkksrll vntwsmgrnp
      421 kiwssnaeef fperfedrki dlrghdfeli pfgtgrrgcp gmqlaltsmr lilaqlahcf
      481 dwelpdgmlp neldmtekfg lslpranhll vkptyhlia
//
LOCUS       XP_040942850             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942850
VERSION     XP_040942850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086916.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..104
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11518
     CDS             1..104
                     /gene="LOC121213794"
                     /coded_by="XM_041086916.1:69..383"
                     /db_xref="GeneID:121213794"
ORIGIN      
        1 mpkkqkkkdh qpsqrpilsp etkppttrtr ndsvyrvara ggqragaald vteaqktegq
       61 ktlgaaprvl lfsarafhcn gfwaylfslv dranlgfyiy ilkt
//
LOCUS       XP_016701927             519 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP736A12 [Gossypium hirsutum].
ACCESSION   XP_016701927
VERSION     XP_016701927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846438.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="cytochrome P450 CYP736A12"
                     /calculated_mol_wt=58783
     Region          77..509
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(114,139,143,151,198,316,319..320,323..324,383,
                     387..388,390,451..454,457..461,464..465)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(220,224,248,315,318..319,388)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..519
                     /gene="LOC107917048"
                     /coded_by="XM_016846438.2:185..1744"
                     /db_xref="GeneID:107917048"
ORIGIN      
        1 maisycdwlp sqmssstltl lfvllgtlcs fiyffsspnr nkngwklppg paplpiigni
       61 hmlgnlphqs lhylakkygp imsimlgkvp tivvsspeaa elflkvhdvv fasrpkvqsa
      121 kyftyggkal aftqygsywr tvrkwcilhf lsasevecfa sirkaevgll vesvrkvaav
      181 getinlslav akvleemmsk vlfgwsmddk idfkplvdea lhlsgvfnls dyvpflapld
      241 lqgytrrlkk assglheffd kmideyqqgi nmddqkpyrs ffqlmvsmld tpinpndedq
      301 pyifgrenik aimvdmvaas fdttsttiew tftellkhpr vmvalqkele ivvgrnrmve
      361 esdlpklayl dmvikesfrl hpvaplliph estedvtvng yfipkksrll vntwsmgrnp
      421 kiwssnaeef fperfkdrki dlrghdfeli pfgtgrrgcp gmqlalvnmr iilaqlahcf
      481 dwelpggmlp neldmtekfg lslpranrll vkstyrlia
//
LOCUS       XP_016702432             123 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 71AU50 [Gossypium hirsutum].
ACCESSION   XP_016702432
VERSION     XP_016702432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="cytochrome P450 71AU50"
                     /calculated_mol_wt=14183
     Region          <10..>123
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     CDS             1..123
                     /gene="LOC107917635"
                     /coded_by="XM_016846943.2:571..942"
                     /db_xref="GeneID:107917635"
ORIGIN      
        1 miksilsrwl mrectylarv fnlsdyasff dplhlrgyar rikkassglh effdkminey
       61 qqgtnmdeqk pytgffqvmv sllgtpmnpn dedqhyivgr enikaimldm vvasfdtitt
      121 aie
//
LOCUS       XP_016701625             101 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016701625
VERSION     XP_016701625.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846136.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..101
                     /product="kinesin-like protein KIN-12E isoform X1"
                     /calculated_mol_wt=10813
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>81
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..101
                     /gene="LOC107916768"
                     /coded_by="XM_016846136.2:435..740"
                     /db_xref="GeneID:107916768"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqrakfikn navvnedasg
       61 dvvamrlqiq qlkkevsclr afvngksenl dneigtccct a
//
LOCUS       XP_016701626              96 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016701626
VERSION     XP_016701626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..96
                     /product="kinesin-like protein KIN-12E isoform X2"
                     /calculated_mol_wt=10519
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>73
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..96
                     /gene="LOC107916768"
                     /coded_by="XM_016846137.2:435..725"
                     /db_xref="GeneID:107916768"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqrakfikn navvnedasg
       61 dvvamrlqiq qlkvssypyy pkfcfskrsi lstsfc
//
LOCUS       XP_016702562             697 aa            linear   PLN 06-AUG-2024
DEFINITION  choline transporter protein 1 [Gossypium hirsutum].
ACCESSION   XP_016702562
VERSION     XP_016702562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847073.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..697
                     /product="choline transporter protein 1"
                     /calculated_mol_wt=78198
     Region          326..669
                     /region_name="Choline_transpo"
                     /note="Plasma-membrane choline transporter; pfam04515"
                     /db_xref="CDD:461337"
     CDS             1..697
                     /gene="LOC107917771"
                     /coded_by="XM_016847073.2:161..2254"
                     /db_xref="GeneID:107917771"
ORIGIN      
        1 mrgplgavle ryplsdgtte dggiirhnrk crdvaflvif iafwvamivn ssfgfnqgnp
       61 lrltygldyk gnvcgdkhah pglhqlelky wlnpnqvyqs gvkdsqfkls narsiclldc
      121 ptpledslsw vcdypegdih lsmddwidrn ydyyeiltpg mknaslqlqg pcypvifptv
      181 nvywscqyia rasnaslrhw kqmggvdike divvdksihs finsrssvlk rymadigkaw
      241 pvlivcggll plflsvvwll miryfvaamp witvaffnil iitvtvfyyl kagwigndai
      301 spiigdhdpy mhvfgrelnh lraaailmtf vmvlsiltsi aivrrilmgt svlkvaakvi
      361 gevqaliifp vipysilaif ymvwisaalh lfssgqvvqn ncntnccayd llsekvncdh
      421 ccgysirytp hiavaiffhl fgcywvtkff iacsstviag svasyywtrg etssevpvlp
      481 vfdsmkrlir yslgsvalgs livsfvesir filesfrrkl kvtettpdsw fgkmvyhtsq
      541 gclscvewti ksvnrnayim iaitgksfcr ssaiatelim nnilrlvrvn vigdvilflg
      601 klfvslssav fgflvldthk yssghnklss pllpvlvcwt lgyvvatlff avvemsidtl
      661 ilsfcqdsee hegtaqfapl llmetlneqn dmqrltq
//
LOCUS       XP_016702564             529 aa            linear   PLN 06-AUG-2024
DEFINITION  putative nuclear RNA export factor SDE5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016702564
VERSION     XP_016702564.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702564.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="putative nuclear RNA export factor SDE5 isoform
                     X1"
                     /calculated_mol_wt=58972
     Region          180..221
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          365..424
                     /region_name="DUF1771"
                     /note="Domain of unknown function (DUF1771); pfam08590"
                     /db_xref="CDD:462528"
     CDS             1..529
                     /gene="LOC107917772"
                     /coded_by="XM_016847075.2:346..1935"
                     /db_xref="GeneID:107917772"
ORIGIN      
        1 mncrfdlirm kgvsissnpn eaalkellda fgskfsledi atayyeakgn vsitadilya
       61 rnngrtskea vdtyenksag anttsvklls gwesetaasp kytssnlnse alkskrgsvs
      121 mgsvssligk nyvkprpsrm dspdttkpvk idskefpasl iwneeapscr ttrnnttngd
      181 lekflfemlg dgfqldksvi qevldccgfd vdksmdklld msastleksd dvigiaaeki
      241 tgncldqtfl irekmqskef sqstlcseea apmirnskrs prgnqdkaal gkeilqalft
      301 vpersgeetk gnnavrevrr smalgelvte plkdtdisfp tvvemlkvpk dvedwpddne
      361 itydslrqav keywvtmkey yksaaeayts gdkaratelm elgrffnkra readekssak
      421 mlesscsdee imsldlrdfe pkealsllrt hllsisgipt fkylriivgt ieedtkkgar
      481 rrlimrqlek esikwteeen griiliqvdi inpknlsfak knqtnlgss
//
LOCUS       XP_040942852             529 aa            linear   PLN 06-AUG-2024
DEFINITION  putative nuclear RNA export factor SDE5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942852
VERSION     XP_040942852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086918.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="putative nuclear RNA export factor SDE5 isoform
                     X1"
                     /calculated_mol_wt=58972
     Region          180..221
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          365..424
                     /region_name="DUF1771"
                     /note="Domain of unknown function (DUF1771); pfam08590"
                     /db_xref="CDD:462528"
     CDS             1..529
                     /gene="LOC107917772"
                     /coded_by="XM_041086918.1:437..2026"
                     /db_xref="GeneID:107917772"
ORIGIN      
        1 mncrfdlirm kgvsissnpn eaalkellda fgskfsledi atayyeakgn vsitadilya
       61 rnngrtskea vdtyenksag anttsvklls gwesetaasp kytssnlnse alkskrgsvs
      121 mgsvssligk nyvkprpsrm dspdttkpvk idskefpasl iwneeapscr ttrnnttngd
      181 lekflfemlg dgfqldksvi qevldccgfd vdksmdklld msastleksd dvigiaaeki
      241 tgncldqtfl irekmqskef sqstlcseea apmirnskrs prgnqdkaal gkeilqalft
      301 vpersgeetk gnnavrevrr smalgelvte plkdtdisfp tvvemlkvpk dvedwpddne
      361 itydslrqav keywvtmkey yksaaeayts gdkaratelm elgrffnkra readekssak
      421 mlesscsdee imsldlrdfe pkealsllrt hllsisgipt fkylriivgt ieedtkkgar
      481 rrlimrqlek esikwteeen griiliqvdi inpknlsfak knqtnlgss
//
LOCUS       XP_016702567             527 aa            linear   PLN 06-AUG-2024
DEFINITION  putative nuclear RNA export factor SDE5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016702567
VERSION     XP_016702567.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702567.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..527
                     /product="putative nuclear RNA export factor SDE5 isoform
                     X2"
                     /calculated_mol_wt=58782
     Region          180..221
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          365..424
                     /region_name="DUF1771"
                     /note="Domain of unknown function (DUF1771); pfam08590"
                     /db_xref="CDD:462528"
     CDS             1..527
                     /gene="LOC107917772"
                     /coded_by="XM_016847078.2:346..1929"
                     /db_xref="GeneID:107917772"
ORIGIN      
        1 mncrfdlirm kgvsissnpn eaalkellda fgskfsledi atayyeakgn vsitadilya
       61 rnngrtskea vdtyenksag anttsvklls gwesetaasp kytssnlnse alkskrgsvs
      121 mgsvssligk nyvkprpsrm dspdttkpvk idskefpasl iwneeapscr ttrnnttngd
      181 lekflfemlg dgfqldksvi qevldccgfd vdksmdklld msastleksd dvigiaaeki
      241 tgncldqtfl irekmqskef sqstlcseea apmirnskrs prgnqdkaal gkeilqalft
      301 vpersgeetk gnnavrevrr smalgelvte plkdtdisfp tvvemlkvpk dvedwpddne
      361 itydslrqav keywvtmkey yksaaeayts gdkaratelm elgrffnkra readekssak
      421 mlessdeeim sldlrdfepk ealsllrthl lsisgiptfk ylriivgtie edtkkgarrr
      481 limrqlekes ikwteeengr iiliqvdiin pknlsfakkn qtnlgss
//
LOCUS       XP_016702568             525 aa            linear   PLN 06-AUG-2024
DEFINITION  putative nuclear RNA export factor SDE5 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016702568
VERSION     XP_016702568.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847079.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702568.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..525
                     /product="putative nuclear RNA export factor SDE5 isoform
                     X3"
                     /calculated_mol_wt=58567
     Region          180..221
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          361..420
                     /region_name="DUF1771"
                     /note="Domain of unknown function (DUF1771); pfam08590"
                     /db_xref="CDD:462528"
     CDS             1..525
                     /gene="LOC107917772"
                     /coded_by="XM_016847079.2:346..1923"
                     /db_xref="GeneID:107917772"
ORIGIN      
        1 mncrfdlirm kgvsissnpn eaalkellda fgskfsledi atayyeakgn vsitadilya
       61 rnngrtskea vdtyenksag anttsvklls gwesetaasp kytssnlnse alkskrgsvs
      121 mgsvssligk nyvkprpsrm dspdttkpvk idskefpasl iwneeapscr ttrnnttngd
      181 lekflfemlg dgfqldksvi qevldccgfd vdksmdklld msastleksd dvigiaaeki
      241 tgncldqtfl irekmqskef sqseeaapmi rnskrsprgn qdkaalgkei lqalftvper
      301 sgeetkgnna vrevrrsmal gelvteplkd tdisfptvve mlkvpkdved wpddneityd
      361 slrqavkeyw vtmkeyyksa aeaytsgdka ratelmelgr ffnkraread ekssakmles
      421 scsdeeimsl dlrdfepkea lsllrthlls isgiptfkyl riivgtieed tkkgarrrli
      481 mrqlekesik wteeengrii liqvdiinpk nlsfakknqt nlgss
//
LOCUS       XP_016702572             527 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 14 [Gossypium hirsutum].
ACCESSION   XP_016702572
VERSION     XP_016702572.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847083.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702572.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..527
                     /product="MLO-like protein 14"
                     /calculated_mol_wt=60776
     Region          10..454
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..527
                     /gene="LOC107917774"
                     /coded_by="XM_016847083.2:581..2164"
                     /db_xref="GeneID:107917774"
ORIGIN      
        1 mnldgeneee rsvaitptwa laavlsvfia vsliversih qltnwlrrtd kksllaalek
       61 mkeelmmlgf msllltatsr sianicipsk fyddssfapc swsdiveene hdsskelqls
      121 ivsasrsfpr ilkgmntitc kedhepfvsy ealeglhrfi flmaithiay scltmllaiv
      181 kirswrawen eahkdqfgfl tgqdrqslme rqmafivnhr anpltqnrvv iwvicffrqf
      241 gcsvvradyl tlrkgfivnh nlilkydfhs ymgrsmeeef qkivgvsftl wgfvvifilf
      301 nvkgsnlyfw iaiipitfvl lvgaklqnvm atltlesagi tgyftgtklt prdelfwfkk
      361 pewllslihf ilfqnafela sffwvwwefg ynsclisnht lvfirvimgf iaqficsyit
      421 lplyalvtqm gtnfkaallp qgirntihgw gkearrrrrr rlarftdrst idtetcsiim
      481 tdtntitsve edyhhlidth eprnstfndi elqpvakvks rrtigsf
//
LOCUS       XP_016703052             403 aa            linear   PLN 06-AUG-2024
DEFINITION  CBS domain-containing protein CBSX5 [Gossypium hirsutum].
ACCESSION   XP_016703052
VERSION     XP_016703052.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847563.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703052.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..403
                     /product="CBS domain-containing protein CBSX5"
                     /calculated_mol_wt=43562
     Region          <346..400
                     /region_name="CBS"
                     /note="CBS domain [Signal transduction mechanisms];
                     COG0517"
                     /db_xref="CDD:440283"
     CDS             1..403
                     /gene="LOC107918060"
                     /coded_by="XM_016847563.2:178..1389"
                     /db_xref="GeneID:107918060"
ORIGIN      
        1 mavrllshel sdlclgkpal rslsvtstia ealevlktsd dnfvsvwscd hkaktssgfe
       61 saagfcdnyd dddcrcvgkv cmvdvicylc kdenlvspsv alkepvsvll pkipglvlhv
      121 epscsllkai dlilegaqnl vvpiktklsn krkqhqkpsp tvtvhkgref cwltqedvir
      181 fllssiglfs pvptfsidtl giisseilti eyhspasaai gaisrslvdq tsvavvdseg
      241 cligeispft laccdetvaa avktlssgdl mayidcggpl edlvrvvssr lkernlngml
      301 ehfsmsmscg gfsssssdee smaasplprs grysrsmsys armvrtaeai vchpksslva
      361 vmiqaishrv nyvwvieddc rlvgivtfsd mlkvfrehle tia
//
LOCUS       XP_016702715             530 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702715
VERSION     XP_016702715.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702715.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..530
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58480
     Region          <81..493
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
     CDS             1..530
                     /gene="LOC107917861"
                     /coded_by="XM_016847226.2:124..1716"
                     /db_xref="GeneID:107917861"
ORIGIN      
        1 mpgsdpipdp etlqpgnaid ldgedyddde ddaieedded ededeedede nddvlfepat
       61 pravklkmdt lvrrmltgpv pihvhnviit gnmktkgyii etqasealkk attmqdllra
      121 sdavnsrlks lglfdsvait ldsgppeipg svnviikvee arnrvsgeig aytnaeakss
      181 svegsikykn llgfgdlwdg siaygfdrta evsagvylpr lktlvapmtv raylltqdll
      241 tfssykersv glsvglfsnr fhnleyhlaw rnlidpsqmt ssvkmqlghd ylsslkytlk
      301 idkrnspvrp tkgyafiakt higglapdsq slrflrqefd lrcaiplgfy haalnfgics
      361 gvifpwgsgf lnrttsiper fflggnlspv calggpkasw gfktratspy epkrqidden
      421 advasrdslg gnftvtalad lsfdlptrwf rggihahvfa yagnvamlte nefrsfsmqk
      481 figsfrssag igvviptnrf rvelnycyil kkfandhaka gfwltfsrps
//
LOCUS       XP_016702915             255 aa            linear   PLN 06-AUG-2024
DEFINITION  stem-specific protein TSJT1 [Gossypium hirsutum].
ACCESSION   XP_016702915
VERSION     XP_016702915.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847426.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..255
                     /product="stem-specific protein TSJT1"
                     /calculated_mol_wt=28136
     Region          2..230
                     /region_name="DUF3700"
                     /note="Aluminium induced protein; pfam12481"
                     /db_xref="CDD:403619"
     Site            order(6,64,84..86,109)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238891"
     CDS             1..255
                     /gene="LOC107917970"
                     /coded_by="XM_016847426.2:171..938"
                     /db_xref="GeneID:107917970"
ORIGIN      
        1 mlaifhkafa nppeelnspa shkstkkpkq peetlndfls hhphntfsms fgnaavlayv
       61 rheraasvhq rlfcgfddiy clflgslnnl fmlnrqygls kgsneamfvi eayrtlrdrg
      121 pypadqvvkd legsfafviy dsktgtvfaa lgsdggvkly wgiaadgsvv isddldvike
      181 gcaksfapfp tgfmfhsegg lmsfehpmnk iramprvdse gvicganfkv dvytrvnsip
      241 rvgsatnwtd hwdsh
//
LOCUS       XP_016702417             177 aa            linear   PLN 06-AUG-2024
DEFINITION  norbelladine synthase [Gossypium hirsutum].
ACCESSION   XP_016702417
VERSION     XP_016702417.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702417.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="norbelladine synthase"
                     /calculated_mol_wt=19434
     Region          25..169
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(27,29,31,40..42,44..45,64,75,77,79,81,90,92,94,102,
                     104,120..121,123,125,135,137,139,141,153..154,159..161,
                     163..164,167..169)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     CDS             1..177
                     /gene="LOC107917607"
                     /coded_by="XM_016846928.2:63..596"
                     /db_xref="GeneID:107917607"
ORIGIN      
        1 mlkqvslicf lifscymgik skdlkhltne levnvaasrv welyrhlgis mltarelktv
       61 iqsvqvlkgd ggvgtilkli fvpgnssyte rfikiddekk vkvakglegg claigcsvqi
      121 vrldiiekts dsciirsdig yavkeefean dpkpniqlla aaaqitkrfl essknda
//
LOCUS       XP_016702438             177 aa            linear   PLN 06-AUG-2024
DEFINITION  norbelladine synthase [Gossypium hirsutum].
ACCESSION   XP_016702438
VERSION     XP_016702438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846949.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="norbelladine synthase"
                     /calculated_mol_wt=19546
     Region          25..154
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..177
                     /gene="LOC107917644"
                     /coded_by="XM_016846949.2:135..668"
                     /db_xref="GeneID:107917644"
ORIGIN      
        1 mlkqvsfiff lifssymrae sqdlkhltne levnvaasrv welyrhlgis mltaqqlknv
       61 iqnvqvlegd ggvgtmlklt fapgnlsyte rfievndekk vkvakglegg claigcsvqi
      121 vrfdivekts dsciiksdia yavkeefean dpkpniqlla aaaqiakrfl esskkda
//
LOCUS       XP_016702485             939 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 44 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702485
VERSION     XP_016702485.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846996.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702485.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..939
                     /product="WD repeat-containing protein 44 isoform X1"
                     /calculated_mol_wt=103020
     Region          <452..772
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          462..567
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          572..606
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          613..649
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          654..697
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          705..743
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          748..772
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..939
                     /gene="LOC107917714"
                     /coded_by="XM_016846996.2:370..3189"
                     /db_xref="GeneID:107917714"
ORIGIN      
        1 msknpidrsn nqkdkdstqg eegtegnkgq gqvvvqvvee eeeeyfyesl driassnscs
       61 csnsttpssd sdsdpvtrss narhpfpvpk fpmavskfdi wisepasvse rrtrllremg
      121 lsrdsglsrs rpgsetelgl gramgagdag grgvqlerrs vssdrlvkke seeqdrgvek
      181 gssscgivrs ksngdcnela vssspclsvc pnsssilsvg lsfanknnnt ecdrinvaap
      241 nlrtcesngs tcnkpptgrs sksvngelgs ksfdggddaa gnevdsseqv ctiknldngk
      301 efvvkeirdd gmwnklkevg tgrqltmeef emcvghspiv helmrrqnve egnkdsadld
      361 angsggggdv skfkkkgswf ksiksvassv tvkghkerrs seerdtssek ggrrsssatd
      421 dsqdvsfhgp ervrvkqygk sckeltalyk sqeiqahngs iwsikfsldg kylasagedc
      481 eihvwrvvas ekrgelmekv ddgnlnfllv angfpettml spiadhhpek krrgrsslsr
      541 kslsldpivv pdtvfalsdk pfcsfqghsd dvldlswsks qqllsssmdk tvrlwdlisk
      601 tclrifshsd yvtciqfnpv ddkyfisgsl dakvriwsip drkvvdwndl hemvtaacyt
      661 pdgqgalvgs ykgschlydt senklqlksq inlqnkkkka hqkkitgfqf apgsssevli
      721 tsadsrirlv desdlihkfk gfrntnsqis asvttngkyv vsasedsyvy vwkqeaesrp
      781 srnkgvtvty syehfhckdv svaipwpgms dtwgvrdtql ndqncfddti devstanhpp
      841 tpdeeysgne gslsasgctn splhgtissa tnsyffdris atwpeeklll aartrspris
      901 ldytsgvnpn ipawgmvivt aglrgeirty qnfglpvri
//
LOCUS       XP_016702486             745 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 44 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016702486
VERSION     XP_016702486.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846997.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702486.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..745
                     /product="WD repeat-containing protein 44 isoform X2"
                     /calculated_mol_wt=81528
     Region          <452..744
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          462..567
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          498..533
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          572..606
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          613..649
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          654..697
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          705..732
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..745
                     /gene="LOC107917714"
                     /coded_by="XM_016846997.2:370..2607"
                     /db_xref="GeneID:107917714"
ORIGIN      
        1 msknpidrsn nqkdkdstqg eegtegnkgq gqvvvqvvee eeeeyfyesl driassnscs
       61 csnsttpssd sdsdpvtrss narhpfpvpk fpmavskfdi wisepasvse rrtrllremg
      121 lsrdsglsrs rpgsetelgl gramgagdag grgvqlerrs vssdrlvkke seeqdrgvek
      181 gssscgivrs ksngdcnela vssspclsvc pnsssilsvg lsfanknnnt ecdrinvaap
      241 nlrtcesngs tcnkpptgrs sksvngelgs ksfdggddaa gnevdsseqv ctiknldngk
      301 efvvkeirdd gmwnklkevg tgrqltmeef emcvghspiv helmrrqnve egnkdsadld
      361 angsggggdv skfkkkgswf ksiksvassv tvkghkerrs seerdtssek ggrrsssatd
      421 dsqdvsfhgp ervrvkqygk sckeltalyk sqeiqahngs iwsikfsldg kylasagedc
      481 eihvwrvvas ekrgelmekv ddgnlnfllv angfpettml spiadhhpek krrgrsslsr
      541 kslsldpivv pdtvfalsdk pfcsfqghsd dvldlswsks qqllsssmdk tvrlwdlisk
      601 tclrifshsd yvtciqfnpv ddkyfisgsl dakvriwsip drkvvdwndl hemvtaacyt
      661 pdgqgalvgs ykgschlydt senklqlksq inlqnkkkka hqkkitgfqf apgsssevli
      721 tsadsrirlv desdlihkfk gskgd
//
LOCUS       XP_016702487             409 aa            linear   PLN 06-AUG-2024
DEFINITION  lanC-like protein GCR2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702487
VERSION     XP_016702487.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846998.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702487.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..409
                     /product="lanC-like protein GCR2 isoform X1"
                     /calculated_mol_wt=45705
     Region          74..405
                     /region_name="euk_LANCL"
                     /note="Eukaryotic Lanthionine synthetase C-like protein;
                     cd04794"
                     /db_xref="CDD:271202"
     CDS             1..409
                     /gene="LOC107917715"
                     /coded_by="XM_016846998.2:182..1411"
                     /db_xref="GeneID:107917715"
ORIGIN      
        1 mlimrigiai gdfnvysvlg llrfyeitnf yfkkkgencf fflsfpkfgn clvwsqvvre
       61 twglsgkrvq dytlytgalg taylvfkayq vtkndndlkl csdivkacds askdsgrvtf
      121 icgragvyal gaviakhsgd tslqqrylek fkeirfpsdl phellygrag flwacsflnk
      181 higkdtista riravvdeii esgkrlagrg rcplmyewhg kkywgaahgl agiihvlmdt
      241 elkpdeaeyv kgtlryiikn rfpsgnypss egsesdrlvh wchgapgitl tlvkaaevfg
      301 dkeflqaald agevvwkrgl lkrigichgi sgnayvflsl yrltgnveyl yrakaftsfl
      361 sdraeklisq gkmhggdrpy slfegiggma hlfldmvkas earfpayei
//
LOCUS       XP_016702488             407 aa            linear   PLN 06-AUG-2024
DEFINITION  lanC-like protein GCR2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016702488
VERSION     XP_016702488.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846999.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702488.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..407
                     /product="lanC-like protein GCR2 isoform X2"
                     /calculated_mol_wt=44810
     Region          72..403
                     /region_name="euk_LANCL"
                     /note="Eukaryotic Lanthionine synthetase C-like protein;
                     cd04794"
                     /db_xref="CDD:271202"
     CDS             1..407
                     /gene="LOC107917715"
                     /coded_by="XM_016846999.2:167..1390"
                     /db_xref="GeneID:107917715"
ORIGIN      
        1 madrffpnem ptfvaestvs tgatggdslt nllslpyksl sdhlksaala lketvvretw
       61 glsgkrvqdy tlytgalgta ylvfkayqvt kndndlklcs divkacdsas kdsgrvtfic
      121 gragvyalga viakhsgdts lqqrylekfk eirfpsdlph ellygragfl wacsflnkhi
      181 gkdtistari ravvdeiies gkrlagrgrc plmyewhgkk ywgaahglag iihvlmdtel
      241 kpdeaeyvkg tlryiiknrf psgnypsseg sesdrlvhwc hgapgitltl vkaaevfgdk
      301 eflqaaldag evvwkrgllk rigichgisg nayvflslyr ltgnveylyr akaftsflsd
      361 raeklisqgk mhggdrpysl fegiggmahl fldmvkasea rfpayei
//
LOCUS       XP_016702489             340 aa            linear   PLN 06-AUG-2024
DEFINITION  lanC-like protein GCR2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016702489
VERSION     XP_016702489.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847000.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702489.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="lanC-like protein GCR2 isoform X3"
                     /calculated_mol_wt=37865
     Region          44..336
                     /region_name="euk_LANCL"
                     /note="Eukaryotic Lanthionine synthetase C-like protein;
                     cd04794"
                     /db_xref="CDD:271202"
     CDS             1..340
                     /gene="LOC107917715"
                     /coded_by="XM_016847000.2:187..1209"
                     /db_xref="GeneID:107917715"
ORIGIN      
        1 mkclllwrnq lslqelpavt hsptsflclt nlslitsnpl lwpskkprvt ficgragvya
       61 lgaviakhsg dtslqqryle kfkeirfpsd lphellygra gflwacsfln khigkdtist
      121 ariravvdei iesgkrlagr grcplmyewh gkkywgaahg lagiihvlmd telkpdeaey
      181 vkgtlryiik nrfpsgnyps segsesdrlv hwchgapgit ltlvkaaevf gdkeflqaal
      241 dagevvwkrg llkrigichg isgnayvfls lyrltgnvey lyrakaftsf lsdraeklis
      301 qgkmhggdrp yslfegiggm ahlfldmvka searfpayei
//
LOCUS       XP_016703218             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703218
VERSION     XP_016703218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..185
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20061
     Region          58..153
                     /region_name="DUF1218"
                     /note="Protein of unknown function (DUF1218); pfam06749"
                     /db_xref="CDD:462000"
     CDS             1..185
                     /gene="LOC107918197"
                     /coded_by="XM_016847729.2:124..681"
                     /db_xref="GeneID:107918197"
ORIGIN      
        1 maskllliav fvldliafgl avaaeqrrst akivqdsevn ynycvydsdi stgygvgafl
       61 flmvsqalvm aaskcfccgk glnpsgsraw avilfivcwl ffliaeicll agsvrnayht
      121 kyrtifseqp pscetvrkgv fgagaafifl naivnkfyyi cyssardksf qayggetgvg
      181 mgtyk
//
LOCUS       XP_040942854             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942854
VERSION     XP_040942854.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086920.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..185
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20061
     Region          58..153
                     /region_name="DUF1218"
                     /note="Protein of unknown function (DUF1218); pfam06749"
                     /db_xref="CDD:462000"
     CDS             1..185
                     /gene="LOC107918197"
                     /coded_by="XM_041086920.1:303..860"
                     /db_xref="GeneID:107918197"
ORIGIN      
        1 maskllliav fvldliafgl avaaeqrrst akivqdsevn ynycvydsdi stgygvgafl
       61 flmvsqalvm aaskcfccgk glnpsgsraw avilfivcwl ffliaeicll agsvrnayht
      121 kyrtifseqp pscetvrkgv fgagaafifl naivnkfyyi cyssardksf qayggetgvg
      181 mgtyk
//
LOCUS       XP_016702490            1155 aa            linear   PLN 06-AUG-2024
DEFINITION  COP1-interacting protein 7 [Gossypium hirsutum].
ACCESSION   XP_016702490
VERSION     XP_016702490.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702490.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1155
                     /product="COP1-interacting protein 7"
                     /calculated_mol_wt=127499
     Region          718..>840
                     /region_name="sucB"
                     /note="2-oxoglutarate dehydrogenase complex
                     dihydrolipoamide succinyltransferase (E2 component);
                     TIGR01347"
                     /db_xref="CDD:273565"
     Region          <820..983
                     /region_name="valS"
                     /note="valyl-tRNA synthetase; Provisional; PRK14900"
                     /db_xref="CDD:237855"
     CDS             1..1155
                     /gene="LOC107917717"
                     /coded_by="XM_016847001.2:520..3987"
                     /db_xref="GeneID:107917717"
ORIGIN      
        1 mdfrtrldya lfqltptrtr cdlvifagke neklasglle pfishlkaak dqiskggysv
       61 tlrplasspp wftkgtllrf vrfvstpevl erfvtverei eqiensiqsy eanaagttva
      121 dgnfqkpyts skskgefdgt eddvpeetsk vrlqrvletr kkvlckeqam ayaralvagy
      181 epdniddlis fsdtfgasrl reacinfmdl ckrknedrlw maelaamqac prpdlsylgt
      241 sgivlageen dssqnltinv samkqtgsaa sdagsgdinp dgslasmdgk sqvqmpwpph
      301 fppymqsfpg sgfqqmppyq gyifpgmhga ppyypgnmhw ppnvedssla fgwepddrrs
      361 hksssrrkkk ssqskgdest esndsssese peeevhkkkh ekksspsrkv virninyiss
      421 krngdkgsds ednsdedefi dgdslkqqve eavgslgkrh kstshhhkkh ngskhrnsvs
      481 ydedelvtkn pegekrsnpw dtfqnlllqd kdldssevdk qparlqdkyf astgtegvtk
      541 pktissdpfl dsqigkdheg etrgrnfgtn efsgsvvkrr dgtneellml qgthsgissr
      601 akisdyaaes tmartrrege wfinkevdks snqdemmglk mfdgenassl areskkdvfv
      661 ddsfmiqgps vgeyqsdqlr igigmvpele atqqehsnse nvskaapvsy epddlymvig
      721 rgsaeetamt swtpeidyem nalsaeatsr hadveitgan ekgpdakklg ksegklpnke
      781 vrsrvsngpl aksksdvvsk srkppagskt mirrtksdqe enrkkmeelr iqrqkriaer
      841 saagglnpvt srrssaeskt saastksqps tqdtkkspkp vlrsstierl atarntskvs
      901 saelkssqpk kptlkeisss ttqkaapakd kksstnkaka sdiksgtnke lpsgdnaqgk
      961 resnevtval pmepapskat qptdivddfk diqelqttpi ektegnatlk pnpsgedqss
     1021 nakmvtvnkp mqldhvqgde efimptkvvs edniapegfg kdipettvhp vppvpsktvr
     1081 fstvnieemg atnekyqspr ipeieistpp pnngmdkepm hsrkkwnnee sppkaakgfr
     1141 kllffgrksk nyata
//
LOCUS       XP_040942855             194 aa            linear   PLN 06-AUG-2024
DEFINITION  TIR-only protein [Gossypium hirsutum].
ACCESSION   XP_040942855
VERSION     XP_040942855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086921.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="TIR-only protein"
                     /calculated_mol_wt=21900
     Region          4..192
                     /region_name="PLN03194"
                     /note="putative disease resistance protein; Provisional"
                     /db_xref="CDD:215626"
     CDS             1..194
                     /gene="LOC107917185"
                     /coded_by="XM_041086921.1:291..875"
                     /db_xref="GeneID:107917185"
ORIGIN      
        1 mhmqryssaa mkmmnfhrnf lalqtptnpl vtnkacdvfi nhrgidtkrt iatllydhls
       61 rlnlqpfldn knmkpgdklf dnidnaiknc kvgitvfspn ycksyfclhe lalimeskkk
      121 vipifcdikp sqlalvnngt vpdkdlerfk laieeakntv gltfdslkgn wsdvvtsase
      181 iviesliemk seei
//
LOCUS       XP_016701779             627 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 9 [Gossypium hirsutum].
ACCESSION   XP_016701779
VERSION     XP_016701779.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701779.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..627
                     /product="ABC transporter G family member 9"
                     /calculated_mol_wt=69233
     Region          13..619
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..627
                     /gene="LOC107916914"
                     /coded_by="XM_016846290.2:114..1997"
                     /db_xref="GeneID:107916914"
ORIGIN      
        1 makeldveaa nksednmkpt aifkstnesv vlkfvdvvys ikfgksgnyf qkksgsgekv
       61 ilngisgvve pgemlamlgp sgsgkttllt alggplggcl sgtvtyngkp fsnsvkrntg
      121 fvtqddvlyp hltvtetlvf tallrlpnsf skqekimhae avinelglvd cknsiigdpf
      181 trgvsggerk rvsigqemli npsllfldep tsgldsttaq rlvstlsefa kggrtivlti
      241 hqpssrlfym fdkvlllseg nplyfgqgsa tmdyfsrigy apsvamnpsd flldlsngit
      301 ssnespkeqt lvkttlvsay ksnigeklre elkdnskhhh dqmesktfer wpttwwqqft
      361 vllqrglker khesfsvfnt vevlvvavll gllwwqsdva hlqdqigflf filgfwglfp
      421 lyqaiftfpq erlmlekers aglyrlssyf msriisdlpm eltlpivfit isywmaglkp
      481 tagsflytlf alilcvlgsq giglaigalv mntksaatlg siimltflla sgyyiqqfpg
      541 fmswikyial thyayklllg sqyqphdtyp cnepgkvclv gdfqpiktvg ldgqlisava
      601 lilmvliyrl vaylalmrig vtqklak
//
LOCUS       XP_040942856             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942856
VERSION     XP_040942856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086922.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..127
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14395
     CDS             1..127
                     /gene="LOC121213795"
                     /coded_by="XM_041086922.1:168..551"
                     /db_xref="GeneID:121213795"
ORIGIN      
        1 mnkalmtnfs fftystymql tifekqttqg ldipaspaae enrgrrksym asssssgrrp
       61 rctcssrpgs apcsrhgymv pkqnlkrysa nkeilrralt pspnrkmtlr wwnfkptpsr
      121 lsnmsma
//
LOCUS       XP_016702492            1253 aa            linear   PLN 06-AUG-2024
DEFINITION  trafficking protein particle complex II-specific subunit 130
            homolog [Gossypium hirsutum].
ACCESSION   XP_016702492
VERSION     XP_016702492.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847003.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702492.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1253
                     /product="trafficking protein particle complex II-specific
                     subunit 130 homolog"
                     /calculated_mol_wt=139927
     Region          1138..>1224
                     /region_name="TRAPPC10"
                     /note="Trafficking protein particle complex subunit 10,
                     TRAPPC10; pfam12584"
                     /db_xref="CDD:403698"
     CDS             1..1253
                     /gene="LOC107917719"
                     /coded_by="XM_016847003.2:147..3908"
                     /db_xref="GeneID:107917719"
ORIGIN      
        1 manylaqfqt ikstcnhlii avedvsdlwp tvknsfeerl pfkrsclnnk trnpvfvenl
       61 paeyilttda rlrsrfpqeq ylfwfrepya tlvlvtcedl defktilkpr lklivqnder
      121 ewfivfvsra hpnndqatkm akkvyaklev dfsskkrerc ckfdiyapea nfwedleari
      181 mesvrntldr riqfyedeir klseqrfmpi wnfcnffilk eslafmfema hlhedalrey
      241 delelcylet vnmggkrref ggldhgddqa allipgnksl tqivqddsfr efefrqylfa
      301 cqskllfkln rpfevasrgy sfvisfskvl alhesilpfc mrevwvitac lalvnatnsq
      361 ykegtatpei erefyrlqgd lyslcrvkfl rlayligygt eierspvnsa slsmlpwpkp
      421 avwplvpdea asevllkekm ilqenprvkh fgiqrkplpl eptalirean rrraslsagn
      481 tsemfdgklg fadgsgsdas sktspsskaq aismsrtyst pgnfegsidr pmrlaeifva
      541 aehalkqtis npdllktlss iqdieqkymd ltkgaadnyh rswwkrhgvv ldgeiaavcf
      601 krgnfdlaak syekvcalya gegwqdllae vlpnlaecqk ilndqagylt sivrllsldk
      661 glfsvkerqa fqsevvslah semkhpvpld vsslitfsgn pgpplelcdg dpgtlsvtvw
      721 sgfpdeitld sltltlmaty nadeggklrs ssatvlkpgr ntitfplppq kpgsyvlgvl
      781 tghighltfr shsfskagpa dsddfmsyek ttrpvlkvsk prplvdlsaa issallinea
      841 qwigiiaqpi nyslkgavmh idtgpglkie eshsiemety inaaqistdm ansgdarkdd
      901 nenfeqlsll dgkiefpdwa snvtsilwip iraiddklar gsssgapqkq sivdgmrtva
      961 lklefgisnn qiydqtialh ftnpfhvstr vadqcndgtl llqvtlhsqv katltvndaw
     1021 ldlqdgfvha gqddgrpvsg ffplvispts ragllfrvcl gngtaldenk aqpesilnis
     1081 yriagdrtig ahppvaaksn eiegtsqdli frsalilqrp vldpclavgf lplpsdglrv
     1141 gqlvtmkwrv erlkdieesr vpqtnddvly evnansknwm iagrkrghvs lstkqgsrif
     1201 isilcmplna gyvhpphlgl pdideanisc spagphlvcv lppalsssfc ipa
//
LOCUS       XP_016702394             297 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-1a isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702394
VERSION     XP_016702394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..297
                     /product="importin subunit alpha-1a isoform X1"
                     /calculated_mol_wt=33597
     Region          7..>297
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          81..106
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          116..149
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(140,144,148,184,188,192,234,238)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          157..195
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          201..240
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..297
                     /gene="LOC107917581"
                     /coded_by="XM_016846905.2:1138..2031"
                     /db_xref="GeneID:107917581"
ORIGIN      
        1 mlmfflssqf imkwlfkfdk dkwqkrqrqm qknlrsmesi rkinrelilf fkrnheffhv
       61 erciedaagd piaiqkmfds ipvmasdlms gnesfqfvat arlsfllste nppidvviqs
      121 gvvphfvrfl neqyglqhkl ysvralyaig kgsleqavvv ikhgaipmfi rllccseecy
      181 qlkelvaaal gslasqspdf rdyvlqfgtl tpllslldnh leppmlheki allracsntl
      241 aifcqgnpap sfnqirsalp ilrrlihlnp pvgvigevce daclclsyqs ngsaeqi
//
LOCUS       XP_016702395             262 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-1a isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016702395
VERSION     XP_016702395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846906.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="importin subunit alpha-1a isoform X2"
                     /calculated_mol_wt=29849
     Region          7..>255
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          81..106
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          116..149
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(140,144,148,184,188,192,234,238)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          157..195
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          201..240
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..262
                     /gene="LOC107917581"
                     /coded_by="XM_016846906.2:1138..1926"
                     /db_xref="GeneID:107917581"
ORIGIN      
        1 mlmfflssqf imkwlfkfdk dkwqkrqrqm qknlrsmesi rkinrelilf fkrnheffhv
       61 erciedaagd piaiqkmfds ipvmasdlms gnesfqfvat arlsfllste nppidvviqs
      121 gvvphfvrfl neqyglqhkl ysvralyaig kgsleqavvv ikhgaipmfi rllccseecy
      181 qlkelvaaal gslasqspdf rdyvlqfgtl tpllslldnh leppmlheki allracsntl
      241 aifcqgnpap sfnqilsccc lf
//
LOCUS       XP_040942857             290 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942857
VERSION     XP_040942857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086923.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32088
     Region          116..>234
                     /region_name="PRK08317"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:181382"
     CDS             1..290
                     /gene="LOC121213797"
                     /coded_by="XM_041086923.1:630..1502"
                     /db_xref="GeneID:121213797"
ORIGIN      
        1 mgktnssrdw tqiyaiygmd qwqtlvfllf havffsllsv lfllyfesif hffqtflssp
       61 gaarfaagfs ggvtaisavc lffaaanffy sagplhydma qrmvgsvndw stvklaldig
      121 cgrgillnav atqlkktgss grvvgldpsk rttlstlrta nvegvgeyvt cregdvrslp
      181 fgdnyfdvvv savfvhtvgk eyghrtveaa aermrvlgem vrvlkpggvg vlwdllhvpe
      241 yvrrlqelkm edirvservt afmvsshmvs frkpsqhvvg pgevrldwrc
//
LOCUS       XP_040942858             382 aa            linear   PLN 06-AUG-2024
DEFINITION  PAP-specific phosphatase HAL2-like [Gossypium hirsutum].
ACCESSION   XP_040942858
VERSION     XP_040942858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086924.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..382
                     /product="PAP-specific phosphatase HAL2-like"
                     /calculated_mol_wt=41112
     Region          8..382
                     /region_name="FIG"
                     /note="FBPase/IMPase/glpX-like domain. A superfamily of
                     metal-dependent phosphatases with various substrates.
                     Fructose-1,6-bisphospatase (both the major and the
                     glpX-encoded variant) hydrolyze fructose-1,6,-bisphosphate
                     to fructose-6-phosphate in...; cl00289"
                     /db_xref="CDD:469707"
     Site            order(48,54,79..80,146..149,151..152,266,289,318..319)
                     /site_type="active"
                     /db_xref="CDD:238775"
     Site            order(146,319)
                     /site_type="other"
                     /note="putative lithium-binding site [ion binding]"
                     /db_xref="CDD:238775"
     Site            order(266,293,307,315,319)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238775"
     CDS             1..382
                     /gene="LOC121213798"
                     /coded_by="XM_041086924.1:186..1334"
                     /db_xref="GeneID:121213798"
ORIGIN      
        1 maekndkygk eldlavrivh macslcqkvq qslvsaasgh vlakdddspv tiadwsvqat
       61 vswllsefle grsvsivaee dvqtlskpea asllsavvnt vneclaeapk yglqcpkkvl
      121 gtsqileais rcnstggptg rhwvldpvdg tlgfvrgdqy avalgliedg klvlgvlgcp
      181 nypmkkelln ynhqcnqikp tsppssdiwq kgcvmyarrg tgqawmqpli hgdtkfewpn
      241 satllqaspv ddpsqatfce pvekansnhl fteglassig lknrpmrvhs mvkyaaiarg
      301 daevyikfar sgykekiwdh aagvviveea ggvvtdaggr pldfsrglyl egldrgivac
      361 sgpilhdkii gavyaswdss nl
//
LOCUS       XP_016702054             739 aa            linear   PLN 06-AUG-2024
DEFINITION  translocase of chloroplast 159, chloroplastic-like [Gossypium
            hirsutum].
ACCESSION   XP_016702054
VERSION     XP_016702054.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846565.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702054.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="translocase of chloroplast 159,
                     chloroplastic-like"
                     /calculated_mol_wt=78349
     Region          481..>738
                     /region_name="3a0901s04IAP86"
                     /note="chloroplast protein import component Toc86/159, G
                     and M domains; TIGR00993"
                     /db_xref="CDD:273381"
     CDS             1..739
                     /gene="LOC107917189"
                     /coded_by="XM_016846565.2:92..2311"
                     /db_xref="GeneID:107917189"
ORIGIN      
        1 mdallsapei tsqslstspg ssssssslts nddsefvtss vsertledng ngktndsnen
       61 gegkfetvpe rpfmadpdev iptvrdvsda pfvgsdgsnv ilnedsfgdg dngleeyrge
      121 gsmgkvdvds vgngekddkv emgsigevdq svlsmesgee grigifennl vldggakgfn
      181 pmivetvdhq vvevdgskfs geeelavdak pltgaalgie tlvmketevv pvddnasldn
      241 glnhadgskf sggdelavda enkadiasgv mlgkdnsgte lndlkdeeii dileqafaek
      301 vdggggdgiq akdssaqpte imaahetenl dsdsqskrsv tlpgeeshwp esveqttvar
      361 kvsfegemee kqhqnegset dgevesmffn naeaakqfle elergsaigs hsgadtshnh
      421 iqtnavdsde egdtdeegeg kelfdsaala allkaatgag sdggnitits qdgsrlftve
      481 rpaglgsslq natsaprsnr pnifspavts rgdsdnnlte edkikleklq lirvkflril
      541 qrlglsteds laaqvlyrla hvarrqtsel fsvdsakrka leletegkdd lsfsinmlvl
      601 gkigvgksat insifgeskt sihafepatt vvkeitgmvd gvklriidtp glkssameqg
      661 anhkvlasik qyikkcppdv vvyvdrldsq trdlndlpll rsitnslgss fwknaivalt
      721 haasappdgp sgsplsyed
//
LOCUS       XP_016702380              68 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702380
VERSION     XP_016702380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846891.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..68
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7591
     CDS             1..68
                     /gene="LOC107917562"
                     /coded_by="XM_016846891.2:105..311"
                     /db_xref="GeneID:107917562"
ORIGIN      
        1 mvcfcflvdq rhmlmsskpa agtclrcrsg asvglmktvt rfcyvpiywk swkaiictfc
       61 gavlksyr
//
LOCUS       XP_016702505             839 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase THESEUS 1 [Gossypium hirsutum].
ACCESSION   XP_016702505
VERSION     XP_016702505.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847016.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702505.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..839
                     /product="receptor-like protein kinase THESEUS 1"
                     /calculated_mol_wt=91385
     Region          37..384
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          506..771
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(506..510,514,526,528,557,573..576,580,582,624,626,
                     628..629,631,642,645,663..666)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(506..510,514,526,528,557,573..576,580,624,626,
                     628..629,631,642)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(510,580,582,624,626,628,645,663..666)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(641..648,659..666)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..839
                     /gene="LOC107917729"
                     /coded_by="XM_016847016.2:675..3194"
                     /db_xref="GeneID:107917729"
ORIGIN      
        1 mkmgnlvalv lavvlfeylg ggiqasftpv dnylivcgss knvtfqgrty vpdsghsslt
       61 lksarsvvss nssvpssiyr sarifsavas ykfdikqegr hwvrlyfypl pksgqdltsa
      121 pitvatddfv llgnftfeny ngsflfkeya invtsdtltl tfvpsnnsvs fvnaievvsi
      181 pdailpdqal alnpsapisg lsefametvy rlnmggplit aendtlgrtw endvkylhvn
      241 ssalnvsvnp asikyttlvt petapnlvys taevmgdanv psmafnvtwv lpvdpnfryl
      301 vrahfcdvms sslntlvfnv yinddiavts ldlssltgdl kvpyfkdfis nssvesdtlt
      361 vsigpdsmad itngtmngle imkisndvgs lggvssvknl lpessskknk iwiiigcivg
      421 avgavaligf cycclvarks kdtqqghpwl plplygnslt mtkmsttsqk sgtascisla
      481 ssnlgrffsf qeildatnkf deslllgvgg fgrvytgtle dgtkvavkrg nprseqglae
      541 frteiemlsk lrhrhlvsli gycdersemi lvyeymangp lrshlygtnl pplswkqrle
      601 icigaarglh ylhtgaaqsi ihrdvkttni lldenfvakv adfglsktgp aldqthvsta
      661 vkgsfgyldp eyfrrqqlte ksdvysfgvv lmevlctrpa lnpvlpreqv niaewamtwq
      721 kkgmldqimd snlvgkvnpa slkkygetae kclaehgvdr psmgdvlwnl eyalqleets
      781 salmepddns tnhipaiqtp lepfdnsvsm idgnsgtddd aedaatsavf sqlvnprgr
//
LOCUS       XP_016702506             343 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702506
VERSION     XP_016702506.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847017.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702506.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..343
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37791
     Region          252..308
                     /region_name="Root_cap"
                     /note="Root cap; pfam06830"
                     /db_xref="CDD:462016"
     CDS             1..343
                     /gene="LOC107917730"
                     /coded_by="XM_016847017.2:224..1255"
                     /db_xref="GeneID:107917730"
ORIGIN      
        1 mkiisnassl iilflfisaa svqihgqgvp errtcfsrrs pcflktmtcp sqcpstkpsd
       61 rkakvcyvnc dspickaeck nrkpncnapg aacldprfig gdgivfyfhg ksnehfslvs
      121 dpnlqingrf iglrpagrtr dytwiqaigv lsgsetfsle akraatwdee fdhlrfsyng
      181 nvivvpeghl sswkspesdl tvertsdkns vlvtlpdiae isvnvvpvtr eddrihnyqi
      241 psddcfahle lqfkfyglss kvegvlgrty qpdfmnpakp gtampivgge dkyrtssllt
      301 adcytckfpp arasdqrdss lmdyspldct srassgsgiv crr
//
LOCUS       XP_040942859             337 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942859
VERSION     XP_040942859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086925.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..337
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37267
     Region          115..>269
                     /region_name="ITI_HC_C"
                     /note="Inter-alpha-trypsin inhibitor heavy chain
                     C-terminus; cl46397"
                     /db_xref="CDD:480737"
     Region          246..302
                     /region_name="Root_cap"
                     /note="Root cap; pfam06830"
                     /db_xref="CDD:462016"
     CDS             1..337
                     /gene="LOC107917575"
                     /coded_by="XM_041086925.1:17..1030"
                     /db_xref="GeneID:107917575"
ORIGIN      
        1 meirsssffi iliifvstvi qakadsvycs npasrcygky iqcpyecpst syenrkakvc
       61 hvncdspvck shckckkpnc nspgsacydp rfiggdgivf yfhgksnehf slvsdtslqi
      121 ngrfighrpa grtrdftwiq algilfnshs isleatkaat wnsevdhlkf syngeelvvp
      181 egalsswysp ekevkverve nknsvivtlk dtaeimvnvv pvtkeddrvh hykvpsddcf
      241 ahlevqfrff slspnvdgvl grtyrpdfen pakpgvampv vggedkyrtt sllspdcstc
      301 lfspetgsne ettsqteilt ldctrgasag ygivckk
//
LOCUS       XP_040942860             450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein YnbB isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942860
VERSION     XP_040942860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086926.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="uncharacterized protein YnbB isoform X1"
                     /calculated_mol_wt=47777
     Region          36..438
                     /region_name="YnbB"
                     /note="Cystathionine beta-lyase family protein involved in
                     aluminum resistance [Inorganic ion transport and
                     metabolism, General function prediction only]; COG4100"
                     /db_xref="CDD:443276"
     CDS             1..450
                     /gene="LOC107916825"
                     /coded_by="XM_041086926.1:71..1423"
                     /db_xref="GeneID:107916825"
ORIGIN      
        1 mlvlscarpv yptlslspsr pkctairssl snvhpivpev akaadslsse frgvdnlvac
       61 nssrvlkafq narvgshhfa gctgyghdea ggrealdqaf aeivgaesai vrsqffsgth
      121 aitcalfafl rpgdellava gapydtleev igkrdshglg slkdfgvmyr elplaedggl
      181 dwdvltgalr pytkcaliqr scgyswrrsl sveeigraik iikmqnpncl vmvdncygef
      241 vesieppmvg adliagslik npggtvapcg gyvagrkkwv daaaarlsap glgvdcgstp
      301 gdimraffqg lflapqmvge aikgtflvae vmaskgykvq plprvprsdt vqavqlgnre
      361 lllafceavq rsspigsftk pvagttpgya serigcviyq vifadgtfid gstselscdg
      421 plrepyavfc qggthwtqwg lvlgdvlksl
//
LOCUS       XP_016701687             442 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein YnbB isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016701687
VERSION     XP_016701687.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846198.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701687.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..442
                     /product="uncharacterized protein YnbB isoform X2"
                     /calculated_mol_wt=46844
     Region          36..430
                     /region_name="YnbB"
                     /note="Cystathionine beta-lyase family protein involved in
                     aluminum resistance [Inorganic ion transport and
                     metabolism, General function prediction only]; COG4100"
                     /db_xref="CDD:443276"
     CDS             1..442
                     /gene="LOC107916825"
                     /coded_by="XM_016846198.2:65..1393"
                     /db_xref="GeneID:107916825"
ORIGIN      
        1 mlvlscarpv yptlslspsr pkctairssl snvhpivpev akaadslsse frgvdnlvac
       61 nssrvlkafq narvgshhfa gctgyghdea ggrealdqaf aeivgaesai vrsqffsgth
      121 aitcalfafl rpgdellava gapydtleev igkrdshglg slkdfgvmyr elplaedggl
      181 dwdvltgalr pytkcaliqr scgyswrrsl sveeigraik iikmqnpncl vmvdncygef
      241 vesieppmvg adliagslik npggtvapcg gyvagrkkwv daaaarlsap glgvdcgstp
      301 gdimraffqg lflapqmvge aikgtflvae vmaskgykvq plprvprsdt vqavqlgnre
      361 lllafceavq rsspigsftk pvagttpgya sevifadgtf idgstselsc dgplrepyav
      421 fcqggthwtq wglvlgdvlk sl
//
LOCUS       XP_016701806             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016701806
VERSION     XP_016701806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..257
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27911
     CDS             1..257
                     /gene="LOC107916940"
                     /coded_by="XM_016846317.2:236..1009"
                     /db_xref="GeneID:107916940"
ORIGIN      
        1 mttilqstfk fspftssnee fcekpiccyp vrsprtvslr pnrfklgafg rqrwsfgevg
       61 rckdgiflke egwkrkrkrk rrvvlvmfsr gfgfnggggg sggggggggg kidsntarlv
      121 gnialaiglt ylsatgqlgw vldaivsiwl iavlvpivgv gaflwwagrd ivqsscpncg
      181 ndfqifksfl ndelqlcpyc sqpfsvvddk fvkepvkfsn qtskqkqsfn sfspgfkkgs
      241 nssgavvdie aevkdad
//
LOCUS       XP_016702500             338 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein Os07g0563300 [Gossypium hirsutum].
ACCESSION   XP_016702500
VERSION     XP_016702500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847011.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..338
                     /product="B3 domain-containing protein Os07g0563300"
                     /calculated_mol_wt=37325
     Region          224..326
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(228,231,240,243,245,277,289,291..292,294..295)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..338
                     /gene="LOC107917724"
                     /coded_by="XM_016847011.2:617..1633"
                     /db_xref="GeneID:107917724"
ORIGIN      
        1 maaptvfigt cfhcqsqsdv ffsgwqlrdg sfallchpcg safvegrfce tfhpeasgwr
       61 ecdscnkgih cgcimaahsy aildfggvkc lecclneala lhrnsptfsn peemqasdsh
      121 pkasddteet vtgvdpiasp dsvalnaspd kigtptpgav paaetegess vnspagtkks
      181 rkkkgrknrk daskqhqiqa ryspktspee lreicrqaks sliplfekkl tasdvdtrng
      241 rlvlpkrcae ayfpkisgqq gifltvqdtk gndwevfyry wsntngkmyv leglkdymim
      301 meweagdtvt fykreedekl fmgfkkyqap esaqksst
//
LOCUS       XP_040942861             301 aa            linear   PLN 06-AUG-2024
DEFINITION  translation initiation factor IF-2 [Gossypium hirsutum].
ACCESSION   XP_040942861
VERSION     XP_040942861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086927.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..301
                     /product="translation initiation factor IF-2"
                     /calculated_mol_wt=33395
     Region          40..72
                     /region_name="DUF4408"
                     /note="Domain of unknown function (DUF4408); pfam14364"
                     /db_xref="CDD:405114"
     Region          263..296
                     /region_name="DUF761"
                     /note="Cotton fibre expressed protein; pfam05553"
                     /db_xref="CDD:461675"
     CDS             1..301
                     /gene="LOC121213801"
                     /coded_by="XM_041086927.1:87..992"
                     /db_xref="GeneID:121213801"
ORIGIN      
        1 matlmlslkt alistgvisv aillkvsaps vtqfvtsgip siyglilsfl rppylyllin
       61 giiisivass klqaqkpest eeinpspeiv spalkvpsev fsneysygtp aatvlvaeei
      121 krtveeekvk vvteaapapl rtesmelisl maekppvarr fgqrkavkaa tegkalrvsk
      181 pkrhdtleat wktitegrpm pltrhlkksd tweqrtqkdh ntpppplpnt mkksdtfneh
      241 srepplarss gsgklkkdps lsqdelnrrv eafitkfnee mrlqrqesln qyqemlrrga
      301 q
//
LOCUS       XP_016702502             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702502
VERSION     XP_016702502.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847013.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..107
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12302
     CDS             1..107
                     /gene="LOC107917727"
                     /coded_by="XM_016847013.2:255..578"
                     /db_xref="GeneID:107917727"
ORIGIN      
        1 mlclhksvey psyssldlgi ffgmeikggv aeiqkdrntp lvpkvfqlsn eketiygald
       61 kwvawetefp liaaakalqi fkkrsqwlyv iqvysvywys cfvfssf
//
LOCUS       XP_016702504              87 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702504
VERSION     XP_016702504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847015.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..87
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=9965
     CDS             1..87
                     /gene="LOC107917727"
                     /coded_by="XM_016847015.2:254..517"
                     /db_xref="GeneID:107917727"
ORIGIN      
        1 mlclhksvey psyssldlgi ffgmeikggv aeiqkdrntp lvpkvftiey slickildyk
       61 klyrvfsilg ivfsysmylv fkdkdth
//
LOCUS       XP_040942862              75 aa            linear   PLN 06-AUG-2024
DEFINITION  3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942862
VERSION     XP_040942862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086928.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..75
                     /product="3-hydroxyisobutyryl-CoA hydrolase-like protein
                     3, mitochondrial isoform X3"
                     /calculated_mol_wt=8500
     CDS             1..75
                     /gene="LOC107917727"
                     /coded_by="XM_041086928.1:254..481"
                     /db_xref="GeneID:107917727"
ORIGIN      
        1 mlclhksvey psyssldlgi ffgmeikggv aeiqkdrntp lvpkvftiey slickildyk
       61 klyrvfsilg fstfq
//
LOCUS       XP_040942863              99 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942863
VERSION     XP_040942863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086929.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..99
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10844
     CDS             1..99
                     /gene="LOC121213802"
                     /coded_by="XM_041086929.1:101..400"
                     /db_xref="GeneID:121213802"
ORIGIN      
        1 maknrnkkkr sgvssmdvne gtvpdlpqam dtsetggqkp dsataklktk kgrpmkrskn
       61 vrkmkaveka iaknekyaek sskteskksr tqsakllyd
//
LOCUS       XP_040942864            1195 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942864
VERSION     XP_040942864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086930.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1195
                     /product="myosin-2 isoform X1"
                     /calculated_mol_wt=135859
     Region          206..846
                     /region_name="MYSc_Myo8"
                     /note="class VIII myosin, motor domain; cd01383"
                     /db_xref="CDD:276834"
     Site            order(233..241,283..290,327..337,556..561)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276834"
     Site            233..241
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276834"
     Site            283..290
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276834"
     Site            327..337
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276834"
     Site            556..561
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276834"
     Site            order(585..596,599..608)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276834"
     Site            780..789
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276834"
     Site            order(792..809,816..846)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276834"
     CDS             1..1195
                     /gene="LOC121213803"
                     /coded_by="XM_041086930.1:567..4154"
                     /db_xref="GeneID:121213803"
ORIGIN      
        1 mmlsasptsi vkssleemle slrrqdedek pkdlppalps rptskarlps arrslptnfr
       61 vdsngesggi steverkeeg krkeeelgvk rhvfgsrkmr kfvnvdspyn leavegkkge
      121 drvsdakvev ndnighfikk klrvwcrlsn glwgsgtiqs asgeesfvsl sngkvvkvst
      181 nellpanpei legvndliql sylnepsvlq nlkyrysrdm iyskaglvli avnpykdvqi
      241 ygeefvtsyr qkatdiphvf atadtaynem mndqvsqsii isgesgagkt etakmamryl
      301 avlgggngri grkilethci leafgnakts kndnssrfgk lteihftemg kisgaeiqtf
      361 lleksrvvql aagersyhif yqlcagappt lreklnlkma seynyliqsd slvingvdda
      421 kkflklveal divqmckeeq eqafamiaav lwlgnisfqs ignehyveas adealtsaar
      481 lmgctpneln qalsthrvqa gkdsfakklt lqqaidsrda lakfiyaslf dwlveqinks
      541 lgvhkkyigr sisildiygf esfkknsfeq fcinyanerl qqhfnrhlfk leqeeygldg
      601 idwtkvdfgd nqecldlfek kplgifslld eesnfpnstd ftlanklkqh lhsssyfkgd
      661 rgrafgvrhf agevlydtng fleknrdsln selvqllssc nsqlprlfar krinrslkpt
      721 issdtpkqsv gtnfkgqlfk lmhqlentkp hfircikpnc kqlpdtyeee lvlqqlrycg
      781 ilevvkisra gyptrmthle faerygflll etnasqdpls isvavlkqfn vlpdmyrvgy
      841 tklylrtgqi galedrrkqv lqgviqvqky frghrarrlf helnkgakti qsfvcgenir
      901 rkyaieanrc ssfashllde qlasviylqs virgwlarrd fnnmpnlkql nresvksrrk
      961 vgrkiseakv fatldtdmph eqqiqvvpsv maelqrkvlk aeailgqkeq enatlreqlq
     1021 qyearwleye akmksmedmw qkqmaslqts latarkslaa dsnagqrrgd vvspryydse
     1081 dnvsmgsrtp vgnmpdvvgg rengslnavg nllkefeqrr qtfdddaksl aeirmaqpts
     1141 nvntddefrr lkrrfetwkk eyklrlketk arlhkrgyes dktrrkwwek lgsrs
//
LOCUS       XP_040942865            1188 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942865
VERSION     XP_040942865.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086931.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1188
                     /product="myosin-2 isoform X2"
                     /calculated_mol_wt=135111
     Region          206..846
                     /region_name="MYSc_Myo8"
                     /note="class VIII myosin, motor domain; cd01383"
                     /db_xref="CDD:276834"
     Site            order(233..241,283..290,327..337,556..561)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276834"
     Site            233..241
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276834"
     Site            283..290
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276834"
     Site            327..337
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276834"
     Site            556..561
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276834"
     Site            order(585..596,599..608)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276834"
     Site            780..789
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276834"
     Site            order(792..809,816..846)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276834"
     CDS             1..1188
                     /gene="LOC121213803"
                     /coded_by="XM_041086931.1:567..4133"
                     /db_xref="GeneID:121213803"
ORIGIN      
        1 mmlsasptsi vkssleemle slrrqdedek pkdlppalps rptskarlps arrslptnfr
       61 vdsngesggi steverkeeg krkeeelgvk rhvfgsrkmr kfvnvdspyn leavegkkge
      121 drvsdakvev ndnighfikk klrvwcrlsn glwgsgtiqs asgeesfvsl sngkvvkvst
      181 nellpanpei legvndliql sylnepsvlq nlkyrysrdm iyskaglvli avnpykdvqi
      241 ygeefvtsyr qkatdiphvf atadtaynem mndqvsqsii isgesgagkt etakmamryl
      301 avlgggngri grkilethci leafgnakts kndnssrfgk lteihftemg kisgaeiqtf
      361 lleksrvvql aagersyhif yqlcagappt lreklnlkma seynyliqsd slvingvdda
      421 kkflklveal divqmckeeq eqafamiaav lwlgnisfqs ignehyveas adealtsaar
      481 lmgctpneln qalsthrvqa gkdsfakklt lqqaidsrda lakfiyaslf dwlveqinks
      541 lgvhkkyigr sisildiygf esfkknsfeq fcinyanerl qqhfnrhlfk leqeeygldg
      601 idwtkvdfgd nqecldlfek kplgifslld eesnfpnstd ftlanklkqh lhsssyfkgd
      661 rgrafgvrhf agevlydtng fleknrdsln selvqllssc nsqlprlfar krinrslkpt
      721 issdtpkqsv gtnfkgqlfk lmhqlentkp hfircikpnc kqlpdtyeee lvlqqlrycg
      781 ilevvkisra gyptrmthle faerygflll etnasqdpls isvavlkqfn vlpdmyrvgy
      841 tklylrtgqi galedrrkqv lqgviqvqky frghrarrlf helnkgakti qsfvcgenir
      901 rkyaieanrc ssfashllde qlasviylqs virgwlarrd fnnmpnlkql nresvksrrk
      961 vgrkiseakd mpheqqiqvv psvmaelqrk vlkaeailgq keqenatlre qlqqyearwl
     1021 eyeakmksme dmwqkqmasl qtslatarks laadsnagqr rgdvvspryy dsednvsmgs
     1081 rtpvgnmpdv vggrengsln avgnllkefe qrrqtfddda kslaeirmaq ptsnvntdde
     1141 frrlkrrfet wkkeyklrlk etkarlhkrg yesdktrrkw weklgsrs
//
LOCUS       XP_040942866             976 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942866
VERSION     XP_040942866.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086932.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..976
                     /product="myosin-2 isoform X3"
                     /calculated_mol_wt=111376
     Region          1..627
                     /region_name="MYSc_Myo8"
                     /note="class VIII myosin, motor domain; cd01383"
                     /db_xref="CDD:276834"
     Site            order(14..22,64..71,108..118,337..342)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276834"
     Site            14..22
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276834"
     Site            64..71
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276834"
     Site            108..118
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276834"
     Site            337..342
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276834"
     Site            order(366..377,380..389)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276834"
     Site            561..570
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276834"
     Site            order(573..590,597..627)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276834"
     CDS             1..976
                     /gene="LOC121213803"
                     /coded_by="XM_041086932.1:382..3312"
                     /db_xref="GeneID:121213803"
ORIGIN      
        1 miyskaglvl iavnpykdvq iygeefvtsy rqkatdiphv fatadtayne mmndqvsqsi
       61 iisgesgagk tetakmamry lavlgggngr igrkilethc ileafgnakt skndnssrfg
      121 klteihftem gkisgaeiqt flleksrvvq laagersyhi fyqlcagapp tlreklnlkm
      181 aseynyliqs dslvingvdd akkflklvea ldivqmckee qeqafamiaa vlwlgnisfq
      241 signehyvea sadealtsaa rlmgctpnel nqalsthrvq agkdsfakkl tlqqaidsrd
      301 alakfiyasl fdwlveqink slgvhkkyig rsisildiyg fesfkknsfe qfcinyaner
      361 lqqhfnrhlf kleqeeygld gidwtkvdfg dnqecldlfe kkplgifsll deesnfpnst
      421 dftlanklkq hlhsssyfkg drgrafgvrh fagevlydtn gfleknrdsl nselvqllss
      481 cnsqlprlfa rkrinrslkp tissdtpkqs vgtnfkgqlf klmhqlentk phfircikpn
      541 ckqlpdtyee elvlqqlryc gilevvkisr agyptrmthl efaerygfll letnasqdpl
      601 sisvavlkqf nvlpdmyrvg ytklylrtgq igaledrrkq vlqgviqvqk yfrghrarrl
      661 fhelnkgakt iqsfvcgeni rrkyaieanr cssfashlld eqlasviylq svirgwlarr
      721 dfnnmpnlkq lnresvksrr kvgrkiseak vfatldtdmp heqqiqvvps vmaelqrkvl
      781 kaeailgqke qenatlreql qqyearwley eakmksmedm wqkqmaslqt slatarksla
      841 adsnagqrrg dvvspryyds ednvsmgsrt pvgnmpdvvg grengslnav gnllkefeqr
      901 rqtfdddaks laeirmaqpt snvntddefr rlkrrfetwk keyklrlket karlhkrgye
      961 sdktrrkwwe klgsrs
//
LOCUS       XP_016702499             261 aa            linear   PLN 06-AUG-2024
DEFINITION  chlorophyll a-b binding protein 13, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016702499
VERSION     XP_016702499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847010.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="chlorophyll a-b binding protein 13,
                     chloroplastic"
                     /calculated_mol_wt=28274
     Region          9..261
                     /region_name="PLN00025"
                     /note="photosystem II light harvesting chlorophyll a/b
                     binding protein; Provisional"
                     /db_xref="CDD:215033"
     CDS             1..261
                     /gene="LOC107917723"
                     /coded_by="XM_016847010.2:247..1032"
                     /db_xref="GeneID:107917723"
ORIGIN      
        1 masmlssgtv lrptpflgqn rnanplrdvs vgtakytmgn elwygpdrvk ylgpfsaqip
       61 sylngefpgd ygwdtaglsa dpeafarnra levihgrwam lgalgcitpe vlekwlrvdf
      121 kepvwfkaga qifseggldy lgnpnlvhaq silavlgfqv vlmglvegfr inglpgvgeg
      181 ndlypggqyf dplgladdpv tfaelkvkei kngrlamfsm fgffvqaivt gkgplenlld
      241 hldnpvanna wvyatkfvpg s
//
LOCUS       XP_040942867             726 aa            linear   PLN 06-AUG-2024
DEFINITION  double-strand break repair protein MRE11 [Gossypium hirsutum].
ACCESSION   XP_040942867
VERSION     XP_040942867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086933.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..726
                     /product="double-strand break repair protein MRE11"
                     /calculated_mol_wt=80956
     Region          11..402
                     /region_name="mre11"
                     /note="DNA repair protein (mre11); TIGR00583"
                     /db_xref="CDD:273153"
     CDS             1..726
                     /gene="LOC107917195"
                     /coded_by="XM_041086933.1:126..2306"
                     /db_xref="GeneID:107917195"
ORIGIN      
        1 mndsrrqdvs ntlrilvatd chldymekde irrhdsfqaf deicsiaeek qvdilllggd
       61 lfhknkpsrs tlvkaieilr rhclndqpvq fqvvsdqtvn fpntfghvny edphfnvglp
      121 vfsihgnhdd pagvdnlsai dilsvcnivn yfgkmvpags gvgqitlypi lirkgstava
      181 lyglgnirde rlnrmfqtpq avqwtrpepq egcevsdwft ilvlhqnrvk mnaknainer
      241 flprfldfiv wgheheclid pqevpgmgfh itqpgssvat slidgeskpk hvllleikgn
      301 qyrptkiplt avrpfayiev vlkdepdidp ndqnsilehl dkvasqwsnr kavngsepkl
      361 plvrvkvdys gfmtinpqrf gqkyvgkvan pqdilifskt skrsqkeaki ddserlrpee
      421 lnqqniealv aennlkmeil pvndldvalh nfvnkdekla fynrvqynle etpnkigkds
      481 galkceedlv lkvgerleer vqersshpkd tlqftsrvqs fenvcskndk gigsaasfsd
      541 dedtaqilss anggrkgllt asrssgdase lvkgktstrg rgrgrgrgrg rgrgssglnq
      601 ttldatlgfr hsqrsasvsa saavqsiadd eenvnsasse ehginevdnn lekdeivqgk
      661 grkragprgr grgstskggr ksedslvhkv lmnkhdddee ddaeeiirrf nkpqprvtks
      721 ygalrr
//
LOCUS       XP_040942868             709 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclic nucleotide-gated ion channel 4 [Gossypium hirsutum].
ACCESSION   XP_040942868
VERSION     XP_040942868.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086934.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..709
                     /product="cyclic nucleotide-gated ion channel 4"
                     /calculated_mol_wt=81505
     Region          <386..>514
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          512..618
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(580..581,599..601)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     CDS             1..709
                     /gene="LOC121213804"
                     /coded_by="XM_041086934.1:225..2354"
                     /db_xref="GeneID:121213804"
ORIGIN      
        1 masehefyps ratpmqyftd edegeeggge ieeestddev ckeeekenss dwrslylmcg
       61 grrgggrrrk twslgqvffd pkakwvqewn rvfllvcatg lfvdplffya lsisntcmcl
      121 fvdgwfaitv talrcmtdal hvwnmclqlk mikrssssyg lgnekrsgse segeggdgge
      181 gssnrpraan grhvafqclk akkglffdll vilplpqivl waaipsllek gsvtlvmtvf
      241 liiflfqylp kiyhsvcllr rmqnlsgyif gtvwwgialn liayfvasha agacwyllgi
      301 qrsakclkeq crgiencdlr llackdpiyy gtrsmvrdra rlvwaenrqa rsacidspds
      361 ydygaykwtv qlvtndsrle kilfpifwgl mtlstfgnle sttewlevvf niivltsgll
      421 lvtmlignik vflhattskk qamqlkmrni ewwmrkrrlp sgfkqrvrny erqrwaamrg
      481 vdecqmirnl peglrrdiky hlcldlvrqv plfqhmddlv lenicdrvks liftkgetit
      541 regdpvqrml fvvrghlqss qvlrdgvksc cmlgpgnfsg dellswclrr pfierlppst
      601 stlvtlette afgldaedvk yvtqhfrytf vnervkrsar yyspgwrtwa avaiqlawrr
      661 ykhrltltsl sfirprrpls rsnslgedrl rlytamltsp kpnqddfdf
//
LOCUS       XP_016702560             109 aa            linear   PLN 06-AUG-2024
DEFINITION  dynein light chain 2, cytoplasmic [Gossypium hirsutum].
ACCESSION   XP_016702560
VERSION     XP_016702560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="dynein light chain 2, cytoplasmic"
                     /calculated_mol_wt=11775
     Region          5..89
                     /region_name="DLC-like_DYNLL1_DYNLL2"
                     /note="dynein light chain (DLC)-like domain found in the
                     cytoplasmic dynein light chain 1 (DYNLL1) family; cd21452"
                     /db_xref="CDD:412000"
     CDS             1..109
                     /gene="LOC107917770"
                     /coded_by="XM_016847071.2:280..609"
                     /db_xref="GeneID:107917770"
ORIGIN      
        1 mlegkavvge tdmlqtmqqv aldvaakald ffdvteatei arfikkefdr aygsgwqciv
       61 gtdfgsfvth csgcfiyfci gslaillfrg saatepdphh fsaletlka
//
LOCUS       XP_040942869             260 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 4-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942869
VERSION     XP_040942869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086935.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..260
                     /product="vesicle-associated protein 4-1 isoform X1"
                     /calculated_mol_wt=29330
     Region          76..183
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..260
                     /gene="LOC121213805"
                     /coded_by="XM_041086935.1:176..958"
                     /db_xref="GeneID:121213805"
ORIGIN      
        1 maivdrhqrs serkmfslcp fwhtsttmnn ssssfstknl nhngsrhset vaakrsktvs
       61 siarsllppr rrlrldpsnk lyfpyepgtq arsairlknt skshvafkfq ttapkscfmr
      121 ppggilapge siiatvfkfv erpennevqv dlkskvkfki mslkvtagvd ylpelfdeqr
      181 dqvtierilr vvfldmgrps paldklkrql aeaeaafear kkpapdtgpr vvgeglvide
      241 wkerrekyla rqqveavdst
//
LOCUS       XP_040942870             255 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 4-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942870
VERSION     XP_040942870.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086936.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..255
                     /product="vesicle-associated protein 4-1 isoform X2"
                     /calculated_mol_wt=28709
     Region          76..178
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..255
                     /gene="LOC121213805"
                     /coded_by="XM_041086936.1:177..944"
                     /db_xref="GeneID:121213805"
ORIGIN      
        1 maivdrhqrs serkmfslcp fwhtsttmnn ssssfstknl nhngsrhset vaakrsktvs
       61 siarsllppr rrlrldpsnk lyfpyepgtq arsairlknt skshvafkfq ttapkscfmr
      121 ppggilapge siiaterpen nevqvdlksk vkfkimslkv tagvdylpel fdeqrdqvti
      181 erilrvvfld mgrpspaldk lkrqlaeaea afearkkpap dtgprvvgeg lvidewkerr
      241 ekylarqqve avdst
//
LOCUS       XP_040942871             249 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 4-1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942871
VERSION     XP_040942871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086937.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..249
                     /product="vesicle-associated protein 4-1 isoform X3"
                     /calculated_mol_wt=28171
     Region          76..170
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..249
                     /gene="LOC121213805"
                     /coded_by="XM_041086937.1:210..959"
                     /db_xref="GeneID:121213805"
ORIGIN      
        1 maivdrhqrs serkmfslcp fwhtsttmnn ssssfstknl nhngsrhset vaakrsktvs
       61 siarsllppr rrlrldpsnk lyfpyepgtq arsairlknt skshvafkfq ttapkscfmr
      121 ppggilapge siiatvfkfv erpennevqv dlkskvkfki mslkfdeqrd qvtierilrv
      181 vfldmgrpsp aldklkrqla eaeaafeark kpapdtgprv vgeglvidew kerrekylar
      241 qqveavdst
//
LOCUS       XP_040942872             244 aa            linear   PLN 06-AUG-2024
DEFINITION  vesicle-associated protein 4-1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040942872
VERSION     XP_040942872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086938.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..244
                     /product="vesicle-associated protein 4-1 isoform X4"
                     /calculated_mol_wt=27551
     Region          76..165
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..244
                     /gene="LOC121213805"
                     /coded_by="XM_041086938.1:177..911"
                     /db_xref="GeneID:121213805"
ORIGIN      
        1 maivdrhqrs serkmfslcp fwhtsttmnn ssssfstknl nhngsrhset vaakrsktvs
       61 siarsllppr rrlrldpsnk lyfpyepgtq arsairlknt skshvafkfq ttapkscfmr
      121 ppggilapge siiaterpen nevqvdlksk vkfkimslkf deqrdqvtie rilrvvfldm
      181 grpspaldkl krqlaeaeaa fearkkpapd tgprvvgegl videwkerre kylarqqvea
      241 vdst
//
LOCUS       XP_016703230             496 aa            linear   PLN 06-AUG-2024
DEFINITION  diacylglycerol kinase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016703230
VERSION     XP_016703230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847741.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..496
                     /product="diacylglycerol kinase 5 isoform X1"
                     /calculated_mol_wt=54958
     Region          46..160
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          239..411
                     /region_name="DAGK_acc"
                     /note="Diacylglycerol kinase accessory domain; cl02440"
                     /db_xref="CDD:470579"
     CDS             1..496
                     /gene="LOC107918202"
                     /coded_by="XM_016847741.1:1..1491"
                     /db_xref="GeneID:107918202"
ORIGIN      
        1 mtcswdtmmg dsmlnhilse yyipnyilvp eseakkppcv pscpvlvfin sksggqlggn
       61 llstyrsvln pnqvfdlget kpdkvlhqiy atlgslkqrg ddfasaiens lriivaggdg
      121 tagwllgvis dlklphpppv atvplgtgnn lpfsfgwgkk npgtdrqsvf sfleqvknat
      181 emkidswhii mrmrapkegs cdpigplelp hslhafhris qtdklgmdgy htfrggfwny
      241 fsmgmdaqvs yafhserklh pekfrnqlin qgtyiklgct qgwmfgslfr psptniaqia
      301 kvkvmrkqgq wedlkiprsi gsivclnlps fsggfnpwgt pyrkkfldrg ltppfvddgl
      361 ieivgfrnvl hglvllapng hgtrlaqana vrfefkkgaa nhtfmridge pwkqplpadd
      421 etvvveishf gqvsmlatpl crsrsmhdps sptacynedn nssdegdspd dleekrkfga
      481 adsfkfpdef disyls
//
LOCUS       XP_016703233             489 aa            linear   PLN 06-AUG-2024
DEFINITION  diacylglycerol kinase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016703233
VERSION     XP_016703233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847744.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..489
                     /product="diacylglycerol kinase 5 isoform X2"
                     /calculated_mol_wt=54133
     Region          39..153
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          232..404
                     /region_name="DAGK_acc"
                     /note="Diacylglycerol kinase accessory domain; cl02440"
                     /db_xref="CDD:470579"
     CDS             1..489
                     /gene="LOC107918202"
                     /coded_by="XM_016847744.2:339..1808"
                     /db_xref="GeneID:107918202"
ORIGIN      
        1 mmgdsmlnhi lseyyipnyi lvpeseakkp pcvpscpvlv finsksggql ggnllstyrs
       61 vlnpnqvfdl getkpdkvlh qiyatlgslk qrgddfasai enslriivag gdgtagwllg
      121 visdlklphp ppvatvplgt gnnlpfsfgw gkknpgtdrq svfsfleqvk natemkidsw
      181 hiimrmrapk egscdpigpl elphslhafh risqtdklgm dgyhtfrggf wnyfsmgmda
      241 qvsyafhser klhpekfrnq linqgtyikl gctqgwmfgs lfrpsptnia qiakvkvmrk
      301 qgqwedlkip rsigsivcln lpsfsggfnp wgtpyrkkfl drgltppfvd dglieivgfr
      361 nvlhglvlla pnghgtrlaq anavrfefkk gaanhtfmri dgepwkqplp addetvvvei
      421 shfgqvsmla tplcrsrsmh dpssptacyn ednnssdegd spddleekrk fgaadsfkfp
      481 defdisyls
//
LOCUS       XP_016703232             489 aa            linear   PLN 06-AUG-2024
DEFINITION  diacylglycerol kinase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016703232
VERSION     XP_016703232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847743.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..489
                     /product="diacylglycerol kinase 5 isoform X2"
                     /calculated_mol_wt=54133
     Region          39..153
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          232..404
                     /region_name="DAGK_acc"
                     /note="Diacylglycerol kinase accessory domain; cl02440"
                     /db_xref="CDD:470579"
     CDS             1..489
                     /gene="LOC107918202"
                     /coded_by="XM_016847743.2:416..1885"
                     /db_xref="GeneID:107918202"
ORIGIN      
        1 mmgdsmlnhi lseyyipnyi lvpeseakkp pcvpscpvlv finsksggql ggnllstyrs
       61 vlnpnqvfdl getkpdkvlh qiyatlgslk qrgddfasai enslriivag gdgtagwllg
      121 visdlklphp ppvatvplgt gnnlpfsfgw gkknpgtdrq svfsfleqvk natemkidsw
      181 hiimrmrapk egscdpigpl elphslhafh risqtdklgm dgyhtfrggf wnyfsmgmda
      241 qvsyafhser klhpekfrnq linqgtyikl gctqgwmfgs lfrpsptnia qiakvkvmrk
      301 qgqwedlkip rsigsivcln lpsfsggfnp wgtpyrkkfl drgltppfvd dglieivgfr
      361 nvlhglvlla pnghgtrlaq anavrfefkk gaanhtfmri dgepwkqplp addetvvvei
      421 shfgqvsmla tplcrsrsmh dpssptacyn ednnssdegd spddleekrk fgaadsfkfp
      481 defdisyls
//
LOCUS       XP_016702373             301 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB41 [Gossypium hirsutum].
ACCESSION   XP_016702373
VERSION     XP_016702373.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846884.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702373.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..301
                     /product="transcription factor MYB41"
                     /calculated_mol_wt=33952
     Region          48..>175
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..301
                     /gene="LOC107917556"
                     /coded_by="XM_016846884.2:64..969"
                     /db_xref="GeneID:107917556"
ORIGIN      
        1 mhymtsfpkv ffllhptsps flsfpkkanf kvvlkkcisi yiyiylemgk ppgcdknglk
       61 kgpwtaeedq klidyiqkhg hgrwrtlpkn aglkrcgksc rlrwtnylrp dikrgkfsie
      121 edeviiqlhs vlgnkwsaia arlpgrtdne iknywnthik kkllrmgidp vthaprldll
      181 elssllsssl ynsslnpagf vgsmfnpsff slataflssn qtknleinnl agniqqiqnp
      241 yepyqgnqvp vitqvsqadl nqfsanpglp nlwqidnnvs dskgfcrppc ktlmattmgf
      301 i
//
LOCUS       XP_040942873             281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942873
VERSION     XP_040942873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086939.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..281
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30408
     CDS             1..281
                     /gene="LOC121213806"
                     /coded_by="XM_041086939.1:219..1064"
                     /db_xref="GeneID:121213806"
ORIGIN      
        1 mkktassfcm cfvpvvsdng lmvgkgskks sslsllevkp lhspaenmvd sgekdkdgvg
       61 sfglknksgr rslsryvkav ffgtslmkkm rskkykfksk skfksewlns mhnnnvtied
      121 vdhstrsmss kfssclskss lstnsssstl sssssssslr tssgrlssap lpydskplms
      181 ktvgnngvqg klgkgrhgfn vgvcclllvs llvlviwgkv caifctsavl vfanrlitsi
      241 kqgpseniav dhcmpeigse qykkkiimeg llershirnl y
//
LOCUS       XP_016702407             325 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPOROCYTELESS isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016702407
VERSION     XP_016702407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="protein SPOROCYTELESS isoform X1"
                     /calculated_mol_wt=34894
     Region          29..323
                     /region_name="NOZZLE"
                     /note="Plant transcription factor NOZZLE; pfam08744"
                     /db_xref="CDD:285901"
     CDS             1..325
                     /gene="LOC107917595"
                     /coded_by="XM_016846918.2:153..1130"
                     /db_xref="GeneID:107917595"
ORIGIN      
        1 matsltlltp ntdnpttkpm edeakpamef vksnkgrkss gkgpyqkkqp qrgmgvaqle
       61 rlrkmsetrt tttinqfgce amgasnvpvl hgvanygvpp mminggsggl wgwgadtdgl
      121 mmqrvvgngg fggfnsqvlv gnpgnvqvgc aaasvveask elssmpkfqh ckpehcdlcf
      181 kkkrcnmeng kfngglfnqf gqafpnkgtd fhgwnlennq ntneemmkgf saraarsaya
      241 yaaagqmnin etvdvvaihr kgnsfgtgsy vmeyeffpgk ngrntaskew efpeeasssa
      301 itvggeasya nnapncvdls lklsy
//
LOCUS       XP_016702408             324 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPOROCYTELESS isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016702408
VERSION     XP_016702408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..324
                     /product="protein SPOROCYTELESS isoform X2"
                     /calculated_mol_wt=34766
     Region          29..322
                     /region_name="NOZZLE"
                     /note="Plant transcription factor NOZZLE; pfam08744"
                     /db_xref="CDD:285901"
     CDS             1..324
                     /gene="LOC107917595"
                     /coded_by="XM_016846919.2:161..1135"
                     /db_xref="GeneID:107917595"
ORIGIN      
        1 matsltlltp ntdnpttkpm edeakpamef vksnkgrkss gkgpyqkkqp qrgmgvaqle
       61 rlrkmsetrt tttinqfgce amgasnvpvl hgvanygvpp mminggsggl wgwgadtdgl
      121 mmqrvvgngg fggfnsqvlv gnpgnvqvgc aaasvveask elssmpkfqh ckpehcdlcf
      181 kkrcnmengk fngglfnqfg qafpnkgtdf hgwnlennqn tneemmkgfs araarsayay
      241 aaagqmnine tvdvvaihrk gnsfgtgsyv meyeffpgkn grntaskewe fpeeasssai
      301 tvggeasyan napncvdlsl klsy
//
LOCUS       XP_040942874             221 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS32 [Gossypium hirsutum].
ACCESSION   XP_040942874
VERSION     XP_040942874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086940.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="universal stress protein PHOS32"
                     /calculated_mol_wt=23715
     Region          38..179
                     /region_name="USP_At3g01520-like"
                     /note="universal stress protein At3g01520 and similar
                     proteins; cd23659"
                     /db_xref="CDD:467505"
     CDS             1..221
                     /gene="LOC121213808"
                     /coded_by="XM_041086940.1:231..896"
                     /db_xref="GeneID:121213808"
ORIGIN      
        1 mnpldnsdhp qlptikihhp ssphhptsta tptagarrki gvavdlsdes afavrwavqn
       61 yiraddavvl lhvsptsvlf gadwgplpht pqspgtphsq qkleddfdaf taskaadlak
      121 plkeagipfk ihivkdhdmr erlcleverl glsavimgsr gfgaekrgsd gklgsvsdyc
      181 vhhcvcpvvv vryaddkdvg naqpvvtvrq aeveeeggkd a
//
LOCUS       XP_040942875             221 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS32 [Gossypium hirsutum].
ACCESSION   XP_040942875
VERSION     XP_040942875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086941.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="universal stress protein PHOS32"
                     /calculated_mol_wt=23715
     Region          38..179
                     /region_name="USP_At3g01520-like"
                     /note="universal stress protein At3g01520 and similar
                     proteins; cd23659"
                     /db_xref="CDD:467505"
     CDS             1..221
                     /gene="LOC121213808"
                     /coded_by="XM_041086941.1:231..896"
                     /db_xref="GeneID:121213808"
ORIGIN      
        1 mnpldnsdhp qlptikihhp ssphhptsta tptagarrki gvavdlsdes afavrwavqn
       61 yiraddavvl lhvsptsvlf gadwgplpht pqspgtphsq qkleddfdaf taskaadlak
      121 plkeagipfk ihivkdhdmr erlcleverl glsavimgsr gfgaekrgsd gklgsvsdyc
      181 vhhcvcpvvv vryaddkdvg naqpvvtvrq aeveeeggkd a
//
LOCUS       XP_040942876             221 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS32 [Gossypium hirsutum].
ACCESSION   XP_040942876
VERSION     XP_040942876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086942.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="universal stress protein PHOS32"
                     /calculated_mol_wt=23715
     Region          38..179
                     /region_name="USP_At3g01520-like"
                     /note="universal stress protein At3g01520 and similar
                     proteins; cd23659"
                     /db_xref="CDD:467505"
     CDS             1..221
                     /gene="LOC121213808"
                     /coded_by="XM_041086942.1:231..896"
                     /db_xref="GeneID:121213808"
ORIGIN      
        1 mnpldnsdhp qlptikihhp ssphhptsta tptagarrki gvavdlsdes afavrwavqn
       61 yiraddavvl lhvsptsvlf gadwgplpht pqspgtphsq qkleddfdaf taskaadlak
      121 plkeagipfk ihivkdhdmr erlcleverl glsavimgsr gfgaekrgsd gklgsvsdyc
      181 vhhcvcpvvv vryaddkdvg naqpvvtvrq aeveeeggkd a
//
LOCUS       XP_040942877             163 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942877
VERSION     XP_040942877.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086943.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17480
     CDS             1..163
                     /gene="LOC121213809"
                     /coded_by="XM_041086943.1:607..1098"
                     /db_xref="GeneID:121213809"
ORIGIN      
        1 mtteqeesse geyedeeedy dgdddeggge eeddaenqvv pwsevsssfs mlkpaassds
       61 lsssegglkr vkespsfcse deigcssshg easssmsstr lfklprlaeg nhsarnqdhg
      121 dsesgstaii sslkrlqkhm itndddassi isgicrlsrd qsr
//
LOCUS       XP_040942878             113 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-binding protein KRP1 [Gossypium hirsutum].
ACCESSION   XP_040942878
VERSION     XP_040942878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086944.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="calcium-binding protein KRP1"
                     /calculated_mol_wt=12626
     Region          40..93
                     /region_name="EF-hand_8"
                     /note="EF-hand domain pair; pfam13833"
                     /db_xref="CDD:404678"
     CDS             1..113
                     /gene="LOC121213810"
                     /coded_by="XM_041086944.1:197..538"
                     /db_xref="GeneID:121213810"
ORIGIN      
        1 meldiavdfe dyfpsmmesl gaegfigelc ngfrllmdce rglitfeslk knsimlglhd
       61 mrddeiicml segdldgdga lnqvefcilm lrlspglmdn kgstewveey dvi
//
LOCUS       XP_016742420             834 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g03230 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742420
VERSION     XP_016742420.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886931.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742420.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..834
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g03230 isoform X1"
                     /calculated_mol_wt=93356
     Site            order(38,41,68,78..79,110,112,120,122,124,126..148)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(60,63,65,67,69,96,98,100,102,126,128,130,132,134)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          76..174
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          206..314
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          333..419
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(357,359,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          522..785
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(522..525,528,530,542,544,573,589..592,641,645..646,
                     648,658..659)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..834
                     /gene="LOC107951792"
                     /coded_by="XM_016886931.2:482..2986"
                     /db_xref="GeneID:107951792"
ORIGIN      
        1 misktqfvyp vlllifsshm fkysnavvdt ispgqqlnis qtivsagqmf elgffpptns
       61 tnyymgiwyk nipektvvwi anrdypvtgs avlsisvdsn lvirhgrivy mvtdivtngn
      121 vtatlldsgn lvvrdeksnt lwqsfdfpcn tflpgmrlgy enrngknwsy vswksdddps
      181 pgnftmklds eqgnrililn gddeywrskl weedsnvfes pqevrlnmfn fsfvpnlsma
      241 yltynlyred lisrlmidsn grlrqfswsg newdvlnsqp rnacdvfayc ggnssctevp
      301 spncsclpgf kpnspeywnk anykfgcsri sslqcgndtn ikgaedgfrm lskvvlpkdp
      361 lplhvqalsd crssclnncs cvgfsyinqs csiwigelrn lqqlsaddis gtdfflklpa
      421 adlgtgkrtp skrkqliiii svtisasila salfiwkvkm kmhkrtgedl lsfdlsispe
      481 ptkneqsdvk qrqkhkkeve ipifsfssvs aatnnfslsn klgeggfgpv ykgkllkgne
      541 vavkrlsrks gqgwnelkne avliaklqhk nlvkllgcci egdekilvye ylpnksldlf
      601 lfgtnnifal awgtririvd giaqgllylh qfsrlqiihr dlkasnilld edmnpkisdf
      661 gmarsfggte pratdrivgt ygymapeyal egvfsvksdv fsfgvlllei lsgmkntgfy
      721 qssslnllgy awdlwissrp lelmdivmkd sscanaairy iniallcvqe haadrptmse
      781 vvlmlsnelt clpspkrpaf snvrsmvdsi pnpshwkpet cseneltisa mdar
//
LOCUS       XP_016742421             784 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like serine/threonine-protein kinase SD1-8 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016742421
VERSION     XP_016742421.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742421.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..784
                     /product="receptor-like serine/threonine-protein kinase
                     SD1-8 isoform X2"
                     /calculated_mol_wt=87597
     Site            order(38,41,68,78..79,110,112,120,122,124,126..148)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(60,63,65,67,69,96,98,100,102,126,128,130,132,134)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          76..174
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          206..314
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          333..419
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(357,359,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          522..735
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          737..784
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..784
                     /gene="LOC107951792"
                     /coded_by="XM_016886932.2:483..2837"
                     /db_xref="GeneID:107951792"
ORIGIN      
        1 misktqfvyp vlllifsshm fkysnavvdt ispgqqlnis qtivsagqmf elgffpptns
       61 tnyymgiwyk nipektvvwi anrdypvtgs avlsisvdsn lvirhgrivy mvtdivtngn
      121 vtatlldsgn lvvrdeksnt lwqsfdfpcn tflpgmrlgy enrngknwsy vswksdddps
      181 pgnftmklds eqgnrililn gddeywrskl weedsnvfes pqevrlnmfn fsfvpnlsma
      241 yltynlyred lisrlmidsn grlrqfswsg newdvlnsqp rnacdvfayc ggnssctevp
      301 spncsclpgf kpnspeywnk anykfgcsri sslqcgndtn ikgaedgfrm lskvvlpkdp
      361 lplhvqalsd crssclnncs cvgfsyinqs csiwigelrn lqqlsaddis gtdfflklpa
      421 adlgtgkrtp skrkqliiii svtisasila salfiwkvkm kmhkrtgedl lsfdlsispe
      481 ptkneqsdvk qrqkhkkeve ipifsfssvs aatnnfslsn klgeggfgpv ykgkllkgne
      541 vavkrlsrks gqgtnnifal awgtririvd giaqgllylh qfsrlqiihr dlkasnilld
      601 edmnpkisdf gmarsfggte pratdrivgt ygymapeyal egvfsvksdv fsfgvlllei
      661 lsgmkntgfy qssslnllgy awdlwissrp lelmdivmkd sscanaairy iniallcvqe
      721 haadrptmse vvlmlsnelt clpspkrpaf snvrsmvdsi pnpshwkpet cseneltisa
      781 mdar
//
LOCUS       XP_040942879             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942879
VERSION     XP_040942879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086945.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086945.1:1018..1320"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942880             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942880
VERSION     XP_040942880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086946.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086946.1:755..1057"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942881             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942881
VERSION     XP_040942881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086947.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086947.1:1038..1340"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942882             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942882
VERSION     XP_040942882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086948.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086948.1:1026..1328"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942883             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942883
VERSION     XP_040942883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086949.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086949.1:413..715"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942884             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942884
VERSION     XP_040942884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086950.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086950.1:272..574"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942885             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942885
VERSION     XP_040942885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086951.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086951.1:614..916"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942886             100 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942886
VERSION     XP_040942886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086952.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X1"
                     /calculated_mol_wt=10996
     CDS             1..100
                     /gene="LOC107951789"
                     /coded_by="XM_041086952.1:257..559"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 mvelynktqr lpspsinasa pfekvsmkqn yhneirsatr ilkkkklkin vhrpvgtrvv
       61 fdeegntqap lamladktsg dilldqdieg vvedsissss
//
LOCUS       XP_040942887              79 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942887
VERSION     XP_040942887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086953.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..79
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X2"
                     /calculated_mol_wt=8602
     CDS             1..79
                     /gene="LOC107951789"
                     /coded_by="XM_041086953.1:2055..2294"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 maayqrkrsf anqtrsatri lkkkklkinv hrpvgtrvvf deegntqapl amladktsgd
       61 illdqdiegv vedsissss
//
LOCUS       XP_040942888              79 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 32-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942888
VERSION     XP_040942888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086954.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..79
                     /product="DEAD-box ATP-dependent RNA helicase 32-like
                     isoform X2"
                     /calculated_mol_wt=8602
     CDS             1..79
                     /gene="LOC107951789"
                     /coded_by="XM_041086954.1:1914..2153"
                     /db_xref="GeneID:107951789"
ORIGIN      
        1 maayqrkrsf anqtrsatri lkkkklkinv hrpvgtrvvf deegntqapl amladktsgd
       61 illdqdiegv vedsissss
//
LOCUS       XP_040942889             814 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1
            [Gossypium hirsutum].
ACCESSION   XP_040942889
VERSION     XP_040942889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086955.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..814
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD1-1"
                     /calculated_mol_wt=90648
     Site            order(37,39,42,70,79..80,114,116,124,126,128,130..142,
                     147..156)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(62,65,67,69,71,98,100,102,104,106,130,132,134,136,
                     138)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          77..182
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          214..322
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          348..423
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(357,361,376)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          502..767
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(502..506,510,522,524,553,569..572,576,578,621,623,
                     625..626,628,639,642,660..663)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(502..506,510,522,524,553,569..572,576,621,623,
                     625..626,628,639)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(506,576,578,621,623,625,642,660..663)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(638..645,656..663)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Region          769..814
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..814
                     /gene="LOC121213811"
                     /coded_by="XM_041086955.1:155..2599"
                     /db_xref="GeneID:121213811"
ORIGIN      
        1 merkstegfg rcfllacmlv fvlaasaatd nitpgrsird gealvssdet felgffsspv
       61 nsttrylgiw ykvspetvvw ianreaplld hfgvlnvtke gsiilqdkkt diiwssnrtr
      121 taenpvlqll dsgnlivkdg ndsglanllw qsfdypcdtl lpgmklgksf itgtnwslss
      181 wkglndpapg rfsalidpeg fpqlvvrngs aifyrggswn gerftgtpdl kqvessnlfk
      241 ftfelnknev yyrgepypsl isrlvvnqsg flrrlvrtkq sqswieiyfa pldecdhyav
      301 cgpyascnin ncacldgfep kyptewdhsk wsggcvrkte lacqnsvftk ynglklpdts
      361 nssfdasmsl kecqekcskn csciayansd irnggsgcll wfgdlidmri ypdggqdlyv
      421 rmanstlgyl vasknssknk ivaiiviavi lvglilggli vylrwkklrk qveggkddme
      481 lpvfdlstiv katdnfsddn klgqggfgpv ykgtlpegqd iavkrlskss gqgleefkne
      541 vgliaklqhr nlvrllgcsi pgdekmliye ympnksldyf ifdqtksell dwrrrmhiid
      601 giargllylh qdsrlriihr dlkasnvlld sdmcpkisdf gmartiwgdq teantnkivg
      661 tygymppeya vdglfsiksd vfsfgvlvle ivsgkknrgf fhpehshnlv ghawklwmee
      721 kplqliesnl gdcfvvsevl rcihvgllcv qkrpedrpsm ssvvlmlgse nsvpqpkqpg
      781 ffterslpes dahssthhep assngvtisl lear
//
LOCUS       XP_040942890             811 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 [Gossypium hirsutum].
ACCESSION   XP_040942890
VERSION     XP_040942890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086956.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..811
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290"
                     /calculated_mol_wt=90658
     Site            order(30..31,33,36,63,73..74,108,110,119,121,123,125..134,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(55,58,60,62,64,92,94,96,98,100,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          71..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..313
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,357,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          501..768
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(501..505,509,521,523,552,568..571,575,577,620,622,
                     624..625,627,638,641,659..662)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(501..505,509,521,523,552,568..571,575,620,622,
                     624..625,627,638)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(505,575,577,620,622,624,641,659..662)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(637..644,655..662)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..811
                     /gene="LOC121203321"
                     /coded_by="XM_041086956.1:282..2717"
                     /db_xref="GeneID:121203321"
ORIGIN      
        1 meaflmelvl clllfftrrt waidtltqgq sikdgetlvs aggsfelgff spgnsksryv
       61 giwykkvstg tvvwvanret lvsdasgvls inekgilsim ngtkgivwss ntsrksaeep
      121 iaqlldsgnf vvkdrndsds enflwqsfdh pcdtflpgmk iginfvtgse rhasswknte
      181 dpapgiytyr vdlqgypqvv vkkgadilfr agswnglylt dgplavnply ssefvlnene
      241 vyytynvqnn siytrfllnp sgltqrtlwn ertnnwevya tsqsdqcsiy ahcgsyatcs
      301 tnesppckcl egfihrsasp rdinsvdwsy gctrrtpltc hggdsflrkt glklpdtskt
      361 wanisidlke ckklclkncs ctayanldir egghgcllwf gdlidiiefs eggqdlyirl
      421 atsdlnhirs kgklneklka viiaisviia sgmtiialll yvqkimlrnt gehgkedlel
      481 pvfdlttiat atnnfssnni lgqggfgpvy kgtliegqei avkrlsknsg qgleefknev
      541 tlisklqhrn lvklfgccir kdekmlvyey mpnkslnyfi fdqtrsklld whirmhivdg
      601 iargvlylhh dsrlkiihrd lkasnilldh nmnpkisdfg larkfgvdqt qaktkrvvgt
      661 ygymspeyal dglfsmksdv fsfgvlvlei lsgkknrgfs hpehghnllg hawklwmekr
      721 plelidialg dsydateglr cinvallcvq qcppdrpnms lvlvmlcgds vlpqpkepgf
      781 fiernlpmad sisvkseiss myrsitslep r
//
LOCUS       XP_016742412             817 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742412
VERSION     XP_016742412.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742412.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..817
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X1"
                     /calculated_mol_wt=92517
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..317
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..419
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(354,358,373)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          506..771
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(506..510,514,526,528,557,573..576,580,582,625,627,
                     629..630,632,643,646,664..667)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(506..510,514,526,528,557,573..576,580,625,627,
                     629..630,632,643)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(510,580,582,625,627,629,646,664..667)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(642..649,660..667)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..817
                     /gene="LOC107951784"
                     /coded_by="XM_016886923.2:173..2626"
                     /db_xref="GeneID:107951784"
ORIGIN      
        1 memdfhfysa ccfliifskv staidtlsps elltdgmtlv srngnfelgf ftpgssenry
       61 lgiwyknipm qtvvwvanrr npinnstgml kiessgkili qvqnktvvws tnstarvqnp
      121 ilqlldsgnl vakdgkdsnp enyiwqsfdy psdtmlpemk igidlrtgfh rrltawknwd
      181 dpspsdltyg ielkgnpqlv lrkglekyfr sglwngngfs eapnyrsnpi fdydfiwnes
      241 evyyifflkn ksvmsrlvln qtqserqrya wspetqtwkl fafqpdgncn kyglcgpngn
      301 cadevpacqc ltgfrpkwfe rwnssdwsdg cihskplncq sgdgfirigk vktpdsansw
      361 vnktinlkec rakclrncsc maftnlfvtk gvsgcvmwfd dlldikhqsd gqdlyirvsa
      421 seaaerkkka kvklaiilat vivallgfll lvyhlrrsrr klkdevednn lndgedkden
      481 edmdvavfef gtiaqatdsf sfmnklgqgg fgpvykgtla ngqeiavkrl skssgqgpke
      541 fknevkliak lqhrnlvrll gccihgderm lvyeympnrs ldkfifdetr ctvltwskrf
      601 riicgvargl lylhqdsrlr iihrdlktsn vlldsemnpk isdfgmartf ggdqieantn
      661 rvvgtygyma peyaidglfs aksdvfsfgi llleitsgrk nrgfyhsnqs gnliehawrl
      721 wkkgklldla deflvetgdl skllrcmhis llciqlypee rpsmasvvlm lgsdnelplp
      781 kelgslfhkk pfeansssgn desssrneis ssllear
//
LOCUS       XP_016742413             816 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016742413
VERSION     XP_016742413.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742413.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..816
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X2"
                     /calculated_mol_wt=92446
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..317
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          336..419
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(354,358,373)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          505..770
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(505..509,513,525,527,556,572..575,579,581,624,626,
                     628..629,631,642,645,663..666)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(505..509,513,525,527,556,572..575,579,624,626,
                     628..629,631,642)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(509,579,581,624,626,628,645,663..666)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(641..648,659..666)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..816
                     /gene="LOC107951784"
                     /coded_by="XM_016886924.2:173..2623"
                     /db_xref="GeneID:107951784"
ORIGIN      
        1 memdfhfysa ccfliifskv staidtlsps elltdgmtlv srngnfelgf ftpgssenry
       61 lgiwyknipm qtvvwvanrr npinnstgml kiessgkili qvqnktvvws tnstarvqnp
      121 ilqlldsgnl vakdgkdsnp enyiwqsfdy psdtmlpemk igidlrtgfh rrltawknwd
      181 dpspsdltyg ielkgnpqlv lrkglekyfr sglwngngfs eapnyrsnpi fdydfiwnes
      241 evyyifflkn ksvmsrlvln qtqserqrya wspetqtwkl fafqpdgncn kyglcgpngn
      301 cadevpacqc ltgfrpkwfe rwnssdwsdg cihskplncq sgdgfirigk vktpdsansw
      361 vnktinlkec rakclrncsc maftnlfvtk gvsgcvmwfd dlldikhqsd gqdlyirvsa
      421 seaerkkkak vklaiilatv ivallgflll vyhlrrsrrk lkdevednnl ndgedkdene
      481 dmdvavfefg tiaqatdsfs fmnklgqggf gpvykgtlan gqeiavkrls kssgqgpkef
      541 knevkliakl qhrnlvrllg ccihgderml vyeympnrsl dkfifdetrc tvltwskrfr
      601 iicgvargll ylhqdsrlri ihrdlktsnv lldsemnpki sdfgmartfg gdqieantnr
      661 vvgtygymap eyaidglfsa ksdvfsfgil lleitsgrkn rgfyhsnqsg nliehawrlw
      721 kkgklldlad eflvetgdls kllrcmhisl lciqlypeer psmasvvlml gsdnelplpk
      781 elgslfhkkp feansssgnd esssrneiss sllear
//
LOCUS       XP_016742414             807 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 [Gossypium hirsutum].
ACCESSION   XP_016742414
VERSION     XP_016742414.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742414.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..807
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290"
                     /calculated_mol_wt=90859
     Site            order(24..25,27,30,57,67..68,102,104,113,115,117,119..131,
                     136..145)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(49,52,54,56,58,86,88,90,92,94,119,121,123,125,127)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          65..171
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          203..308
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          331..416
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(350,352,369)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          496..763
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(496..500,504,516,518,547,563..566,570,572,615,617,
                     619..620,622,633,636,654..657)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(496..500,504,516,518,547,563..566,570,615,617,
                     619..620,622,633)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(500,570,572,615,617,619,636,654..657)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(632..639,650..657)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Region          764..807
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..807
                     /gene="LOC107951785"
                     /coded_by="XM_016886925.2:229..2652"
                     /db_xref="GeneID:107951785"
ORIGIN      
        1 mvlflclllf ftttlalnti tpgqsikdge tlvsaggsfe lgffgpknsk sryvgiwykk
       61 vstgtvvwva nretpvsdas gvlsinhngi lsimnrtkgi vwssntsrna seetiaqlld
      121 sgnfvvkdrn dsdptnflwq sfdypcdtfl pgmklgrnfv tgfdwhissw ksmqnpapgl
      181 yslrtdpqgl pqfvlkkgpe ilfragpwng ayltgrtlpt vnpiysfefv wneneiyyey
      241 evqnhsvytr yllnpsgliq rtiwnerknd wevfatsqad qcsiyaycgp yatcntnesp
      301 pckclegfmh rsastedins vdwsngctrr tplaceggds flkqtglrip dtskswadls
      361 idlkeceklc lkncsctayt nldireggrg cllwygdltd iselneggqd lyirlatcdl
      421 nhiqnkgrik ekqkaaiiai sviitsgmml lalwlyvrrk klrktgehgk edlelpafdf
      481 atvamatnnf ssnnilgqgg fgpvykgtli egqeiavkrl sknsgqglee fknevtlisk
      541 lqhrnlvklf gccvrkdekm liyeympnks ldyfifdqtr sklldwrirm hiidgiargv
      601 lylhhdsrlr iihrdlkasn illdnnmnpk isdfglarkf gvdqtqaktk rvvgtygyms
      661 peyaldglfs tksdvfsfgv lvleilsgkk nrgfshpehd hnllghawtl wmgkrpleli
      721 dtafgdlyna tevlrcinva llcvqqsppd rpnmslvllm lcgdsvlpqp kqpgffiern
      781 lpttdsisek nemfsiyest itslepr
//
LOCUS       XP_040942892             320 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942892
VERSION     XP_040942892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086958.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..320
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36012
     Region          <12..134
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     CDS             1..320
                     /gene="LOC121213812"
                     /coded_by="XM_041086958.1:1..963"
                     /db_xref="GeneID:121213812"
ORIGIN      
        1 mqrrnealek ilsesqkeng elkdrvivle gslrqyrnrn stielkasls kieemkkrie
       61 elettlqnge iqikhlkane srnnerlhyf qsqvrdrdhl meeavvqire vadyiqalav
      121 qvdmltgele evekpvvhlg vdnedslggt pinvqvqldg rpqgaflavr sqhyqtgtst
      181 pvncstglgs nfpvalvkpa kiqqlrveyl dttktprkkg newdnvgiyn kghskpitvg
      241 rpetettrhq rplkhesggk penyivfkkl verlinigvv kfdgsssten llpnhiddgv
      301 namyeeglgs vhinavhkdn
//
LOCUS       XP_016742415             125 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-binding protein KRP1 [Gossypium hirsutum].
ACCESSION   XP_016742415
VERSION     XP_016742415.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742415.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..125
                     /product="calcium-binding protein KRP1"
                     /calculated_mol_wt=13834
     Site            order(46,48,56,82,84,86,93)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          48..101
                     /region_name="EF-hand_8"
                     /note="EF-hand domain pair; pfam13833"
                     /db_xref="CDD:404678"
     CDS             1..125
                     /gene="LOC107951788"
                     /coded_by="XM_016886926.2:412..789"
                     /db_xref="GeneID:107951788"
ORIGIN      
        1 msaippstsq nssssgfqdf lpvmadklgg dgligelcng fkllmdrekg vitfdslkkn
       61 sallglqdlt dddlkcmmke gdfdgdgaln qmefcvlmfr lspelmeasr fffeeafqhe
      121 fkdfh
//
LOCUS       XP_016742408             825 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742408
VERSION     XP_016742408.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742408.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X1"
                     /calculated_mol_wt=93409
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          210..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,357,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          507..779
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,534,536,565,581..584,588,590,633,635,
                     637..638,640,651,654,672..675)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,534,536,565,581..584,588,633,635,
                     637..638,640,651)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(511,588,590,633,635,637,654,672..675)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(650..657,668..675)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Region          784..825
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..825
                     /gene="LOC107951783"
                     /coded_by="XM_016886919.2:123..2600"
                     /db_xref="GeneID:107951783"
ORIGIN      
        1 memgfyfyta ccfltifskp siaidtltps esltdgmtlv sndgsfelgf ftpgssknry
       61 lgiwynnipm htvvwvanri npindstall kiqsngkill lvqnttavws tnstarvenp
      121 vlqlldsgnl vvrdgkdskp enylwqsfdy psdtmlpgmk igidlrtgfh rrlaawknwd
      181 dpspgdltfg vefhgspemv lrkgsekyqr sglwngdgfs gtpklrlnpi fdydfiwndn
      241 evyyiyslkn ksvmsrfvln qtqsvrqryt wnpeaqtwmq fsmmpsdycd kfgrcgpnvd
      301 cdgnklptcq cltgfrprrl drwnssdysa gcihseplnc qsgdgfirig kvktpdtsns
      361 wvnqtmnlke crakclrncs cmaytnvyvt rggsgcamwf gdlldikqfq sdgqdlyvrv
      421 saseaeqkkk akvklaiilg tviaalwgfl livcyirrsr rklkdevedk nlngredkde
      481 nedmelavfe fgtiaqatds fsfinklgqg gfgpvykkcc kifqgtladg qeiavkrlsk
      541 ssgqglnefk nevkliaklq hrnlvrllgc cmqrdermlv yeympnrsld lfifdqtrrt
      601 vltwskrfqi icgiarglly lhqdsrlrii hrdlktsnvl ldsemnpkis dfgmartfgg
      661 dqseantnrv vgtygymape yaidgvfsvk sdvfsfgill lelisgkknr gfyhvnqsgn
      721 liehawrlwe egkpldlade flaetgdlse llrcihisll ciqqhpeerp nmssvvlmlg
      781 shnelplpkq pgflfykkpf eadcssgndg sssrneisls llqar
//
LOCUS       XP_040942893             824 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942893
VERSION     XP_040942893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086959.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..824
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X2"
                     /calculated_mol_wt=93281
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          210..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,357,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          507..778
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,533,535,564,580..583,587,589,632,634,
                     636..637,639,650,653,671..674)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,533,535,564,580..583,587,632,634,
                     636..637,639,650)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(511,587,589,632,634,636,653,671..674)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(649..656,667..674)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Region          783..824
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..824
                     /gene="LOC107951783"
                     /coded_by="XM_041086959.1:123..2597"
                     /db_xref="GeneID:107951783"
ORIGIN      
        1 memgfyfyta ccfltifskp siaidtltps esltdgmtlv sndgsfelgf ftpgssknry
       61 lgiwynnipm htvvwvanri npindstall kiqsngkill lvqnttavws tnstarvenp
      121 vlqlldsgnl vvrdgkdskp enylwqsfdy psdtmlpgmk igidlrtgfh rrlaawknwd
      181 dpspgdltfg vefhgspemv lrkgsekyqr sglwngdgfs gtpklrlnpi fdydfiwndn
      241 evyyiyslkn ksvmsrfvln qtqsvrqryt wnpeaqtwmq fsmmpsdycd kfgrcgpnvd
      301 cdgnklptcq cltgfrprrl drwnssdysa gcihseplnc qsgdgfirig kvktpdtsns
      361 wvnqtmnlke crakclrncs cmaytnvyvt rggsgcamwf gdlldikqfq sdgqdlyvrv
      421 saseaeqkkk akvklaiilg tviaalwgfl livcyirrsr rklkdevedk nlngredkde
      481 nedmelavfe fgtiaqatds fsfinklgqg gfgpvykcck ifqgtladgq eiavkrlsks
      541 sgqglnefkn evkliaklqh rnlvrllgcc mqrdermlvy eympnrsldl fifdqtrrtv
      601 ltwskrfqii cgiargllyl hqdsrlriih rdlktsnvll dsemnpkisd fgmartfggd
      661 qseantnrvv gtygymapey aidgvfsvks dvfsfgilll elisgkknrg fyhvnqsgnl
      721 iehawrlwee gkpldladef laetgdlsel lrcihisllc iqqhpeerpn mssvvlmlgs
      781 hnelplpkqp gflfykkpfe adcssgndgs ssrneislsl lqar
//
LOCUS       XP_016742409             818 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016742409
VERSION     XP_016742409.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742409.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..818
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X3"
                     /calculated_mol_wt=92558
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          210..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,357,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          507..772
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,527,529,558,574..577,581,583,626,628,
                     630..631,633,644,647,665..668)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,527,529,558,574..577,581,626,628,
                     630..631,633,644)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(511,581,583,626,628,630,647,665..668)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(643..650,661..668)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Region          777..818
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..818
                     /gene="LOC107951783"
                     /coded_by="XM_016886920.2:145..2601"
                     /db_xref="GeneID:107951783"
ORIGIN      
        1 memgfyfyta ccfltifskp siaidtltps esltdgmtlv sndgsfelgf ftpgssknry
       61 lgiwynnipm htvvwvanri npindstall kiqsngkill lvqnttavws tnstarvenp
      121 vlqlldsgnl vvrdgkdskp enylwqsfdy psdtmlpgmk igidlrtgfh rrlaawknwd
      181 dpspgdltfg vefhgspemv lrkgsekyqr sglwngdgfs gtpklrlnpi fdydfiwndn
      241 evyyiyslkn ksvmsrfvln qtqsvrqryt wnpeaqtwmq fsmmpsdycd kfgrcgpnvd
      301 cdgnklptcq cltgfrprrl drwnssdysa gcihseplnc qsgdgfirig kvktpdtsns
      361 wvnqtmnlke crakclrncs cmaytnvyvt rggsgcamwf gdlldikqfq sdgqdlyvrv
      421 saseaeqkkk akvklaiilg tviaalwgfl livcyirrsr rklkdevedk nlngredkde
      481 nedmelavfe fgtiaqatds fsfinklgqg gfgpvykgtl adgqeiavkr lskssgqgln
      541 efknevklia klqhrnlvrl lgccmqrder mlvyeympnr sldlfifdqt rrtvltwskr
      601 fqiicgiarg llylhqdsrl riihrdlkts nvlldsemnp kisdfgmart fggdqseant
      661 nrvvgtygym apeyaidgvf svksdvfsfg illlelisgk knrgfyhvnq sgnliehawr
      721 lweegkpldl adeflaetgd lsellrcihi sllciqqhpe erpnmssvvl mlgshnelpl
      781 pkqpgflfyk kpfeadcssg ndgsssrnei slsllqar
//
LOCUS       XP_016742411             673 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016742411
VERSION     XP_016742411.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742411.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..673
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X4"
                     /calculated_mol_wt=76367
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          210..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,357,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          507..>673
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(507..510,513,515,534,536,565,581..584,633,637..638,
                     640,650..651)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..673
                     /gene="LOC107951783"
                     /coded_by="XM_016886922.2:126..2147"
                     /db_xref="GeneID:107951783"
ORIGIN      
        1 memgfyfyta ccfltifskp siaidtltps esltdgmtlv sndgsfelgf ftpgssknry
       61 lgiwynnipm htvvwvanri npindstall kiqsngkill lvqnttavws tnstarvenp
      121 vlqlldsgnl vvrdgkdskp enylwqsfdy psdtmlpgmk igidlrtgfh rrlaawknwd
      181 dpspgdltfg vefhgspemv lrkgsekyqr sglwngdgfs gtpklrlnpi fdydfiwndn
      241 evyyiyslkn ksvmsrfvln qtqsvrqryt wnpeaqtwmq fsmmpsdycd kfgrcgpnvd
      301 cdgnklptcq cltgfrprrl drwnssdysa gcihseplnc qsgdgfirig kvktpdtsns
      361 wvnqtmnlke crakclrncs cmaytnvyvt rggsgcamwf gdlldikqfq sdgqdlyvrv
      421 saseaeqkkk akvklaiilg tviaalwgfl livcyirrsr rklkdevedk nlngredkde
      481 nedmelavfe fgtiaqatds fsfinklgqg gfgpvykkcc kifqgtladg qeiavkrlsk
      541 ssgqglnefk nevkliaklq hrnlvrllgc cmqrdermlv yeympnrsld lfifdqtrrt
      601 vltwskrfqi icgiarglly lhqdsrlrii hrdlktsnvl ldsemnpkis dfgmartfgg
      661 dqseantnrv vgt
//
LOCUS       XP_040942894             666 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942894
VERSION     XP_040942894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086960.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..666
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290 isoform X5"
                     /calculated_mol_wt=75516
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          210..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,357,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          507..>666
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(507..510,513,515,527,529,558,574..577,626,630..631,
                     633,643..644)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..666
                     /gene="LOC107951783"
                     /coded_by="XM_041086960.1:125..2125"
                     /db_xref="GeneID:107951783"
ORIGIN      
        1 memgfyfyta ccfltifskp siaidtltps esltdgmtlv sndgsfelgf ftpgssknry
       61 lgiwynnipm htvvwvanri npindstall kiqsngkill lvqnttavws tnstarvenp
      121 vlqlldsgnl vvrdgkdskp enylwqsfdy psdtmlpgmk igidlrtgfh rrlaawknwd
      181 dpspgdltfg vefhgspemv lrkgsekyqr sglwngdgfs gtpklrlnpi fdydfiwndn
      241 evyyiyslkn ksvmsrfvln qtqsvrqryt wnpeaqtwmq fsmmpsdycd kfgrcgpnvd
      301 cdgnklptcq cltgfrprrl drwnssdysa gcihseplnc qsgdgfirig kvktpdtsns
      361 wvnqtmnlke crakclrncs cmaytnvyvt rggsgcamwf gdlldikqfq sdgqdlyvrv
      421 saseaeqkkk akvklaiilg tviaalwgfl livcyirrsr rklkdevedk nlngredkde
      481 nedmelavfe fgtiaqatds fsfinklgqg gfgpvykgtl adgqeiavkr lskssgqgln
      541 efknevklia klqhrnlvrl lgccmqrder mlvyeympnr sldlfifdqt rrtvltwskr
      601 fqiicgiarg llylhqdsrl riihrdlkts nvlldsemnp kisdfgmart fggdqseant
      661 nrvvgt
//
LOCUS       XP_040942895             818 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g27290 [Gossypium hirsutum].
ACCESSION   XP_040942895
VERSION     XP_040942895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086961.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..818
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g27290"
                     /calculated_mol_wt=92468
     Site            order(31..32,34,37,64,74..75,109,111,119,121,123,125..137,
                     142..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(56,59,61,63,65,93,95,97,99,101,125,127,129,131,133)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          72..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..421
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(355,359,374)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          507..772
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,527,529,558,574..577,581,583,626,628,
                     630..631,633,644,647,665..668)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(507..511,515,527,529,558,574..577,581,626,628,
                     630..631,633,644)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(511,581,583,626,628,630,647,665..668)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(643..650,661..668)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Region          777..818
                     /region_name="DUF3403"
                     /note="Domain of unknown function (DUF3403); pfam11883"
                     /db_xref="CDD:463385"
     CDS             1..818
                     /gene="LOC107952358"
                     /coded_by="XM_041086961.1:102..2558"
                     /db_xref="GeneID:107952358"
ORIGIN      
        1 memgfyfyta ccflvifska staidtlsqs dsltdgmtlv sgdgsfqlgf fspgssknry
       61 lgiwynnipm qtvvwvanrv npindstgll kiqsngkiml lvqnttavwc anstarvenp
      121 vlqlldsgnl vvrdgkdsep enylwqsfdy psdtmlpgmk igidlrtglh rrlaawknwd
      181 dpspgdltyg velegtpemv lrkgsekfyr sglwngdgfs gtpnlrsnpi fdydfvwnen
      241 evyyiyslkn ksvmsrfvln qtqsvrqryt wnpetqtwkl fsimpsdlcd rsglcgpngd
      301 cdnnklpacq cltgfrpkwl erwnssdwsd gcihskplnc ksgdgfiria kvktpdttns
      361 wvnktmnlke crakclrncs cmaytnlyvt rggsgcamwy gdlldikqfq sdgqdlyirv
      421 saseaerkkk akvklaiilg tviaallgfl livcyilrsr rklkdevkdk nlndredkde
      481 nedmelavfe fgtiaqatds fsfnnklgqg gfgpvykgtl gngqeiavkr lskssgqglh
      541 efknevklia klqhrnlvrl lgcciheder mlvyeympnr sldsfifdqt rrrvltwskr
      601 friicgiarg llylhqdsrl riihrdlkts nvlldsemnp kisdfglart fggdqteant
      661 nrvvgtygym apeyaidglf svksdvfsfg illleiisgr knrgfyhvnq sgnliehawr
      721 lwkeskpldl addfladtgd lsellrcihv sllciqqhpe erpnmssvvl mlgshnelps
      781 pkqpgflfyk npfeadcssg ndrlssrnei slsllear
//
LOCUS       XP_016742405             984 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RPS2 [Gossypium hirsutum].
ACCESSION   XP_016742405
VERSION     XP_016742405.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742405.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..984
                     /product="disease resistance protein RPS2"
                     /calculated_mol_wt=112113
     Region          143..377
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <491..>656
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          493..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..984
                     /gene="LOC107951782"
                     /coded_by="XM_016886916.2:507..3461"
                     /db_xref="GeneID:107951782"
ORIGIN      
        1 meflvplfev ikclggptsr ylnqhrklee nvndlrrkvn dlnirkqdle lkkeaeircr
       61 kvvkkevenw fetvrstnve mekiemkfrv vsyfsrarlg rfvcrkieev eriyqqgsfp
      121 egvavdglpa tgvtltttdl egqmdvkeqi ceylrgdevg migvcgmggi gkttimkhin
      181 nqllkenqfd aviwltvsre fnvlklqddl acaldhclpk nklewptvlm eilekkryvl
      241 ilddvwekfa lldvgipepa shngsklvit srsievcnsm gckvfrvqpl srveslnlfl
      301 rqvgddvlqd ptlkelvnli vgecgglpla ivtiassmkg vndafewkna lnelrervts
      361 vkgsdtiife qlkfsydrlk dskiqncfly cslypedyhf dketlienwi deelidelen
      421 rqamhdrght vlnklvnncl lekvmidnvk egvkmhdvvr dmvlsikrgd hfmvkagiel
      481 edipsepkwk eslekvslmn nsiseiplis pkcpnlstll lqnnlnleki lgsffehmhg
      541 lkvldlshtg icylpnsisn ltkltalilr wccqlrhlps laklttlrkl dlcrtdinai
      601 phgiemlenl tylnlyargl kdlpmgiisr fsklqvlkaw lnskgeeaak lskleivlga
      661 fhvlqdfegy akslpsqgpt kywlgvgspk sgyfgnhpwf nnledaevdk evcfinckig
      721 nedfvllpkd iktltvehcr nlkslsnfsv fheanelktc aiswceeiec vvdlslsscn
      781 slqnieilrl rsllnlhelv rveavastsh tptplgifts lqefyligcs sikklfpihl
      841 llgfqhleyi evkhckklek iiaeedeenq nvdrrgsitt ivfpklktlh liklpelksi
      901 cssrvripae slkylsiinc sklrkipfsi pllktgqpsp lsleygyvhp ktwwklvefd
      961 dpnakdilsp lvldyssned eela
//
LOCUS       XP_016742407             984 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RPS2 [Gossypium hirsutum].
ACCESSION   XP_016742407
VERSION     XP_016742407.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742407.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..984
                     /product="disease resistance protein RPS2"
                     /calculated_mol_wt=112113
     Region          143..377
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <491..>656
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          493..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..984
                     /gene="LOC107951782"
                     /coded_by="XM_016886918.2:364..3318"
                     /db_xref="GeneID:107951782"
ORIGIN      
        1 meflvplfev ikclggptsr ylnqhrklee nvndlrrkvn dlnirkqdle lkkeaeircr
       61 kvvkkevenw fetvrstnve mekiemkfrv vsyfsrarlg rfvcrkieev eriyqqgsfp
      121 egvavdglpa tgvtltttdl egqmdvkeqi ceylrgdevg migvcgmggi gkttimkhin
      181 nqllkenqfd aviwltvsre fnvlklqddl acaldhclpk nklewptvlm eilekkryvl
      241 ilddvwekfa lldvgipepa shngsklvit srsievcnsm gckvfrvqpl srveslnlfl
      301 rqvgddvlqd ptlkelvnli vgecgglpla ivtiassmkg vndafewkna lnelrervts
      361 vkgsdtiife qlkfsydrlk dskiqncfly cslypedyhf dketlienwi deelidelen
      421 rqamhdrght vlnklvnncl lekvmidnvk egvkmhdvvr dmvlsikrgd hfmvkagiel
      481 edipsepkwk eslekvslmn nsiseiplis pkcpnlstll lqnnlnleki lgsffehmhg
      541 lkvldlshtg icylpnsisn ltkltalilr wccqlrhlps laklttlrkl dlcrtdinai
      601 phgiemlenl tylnlyargl kdlpmgiisr fsklqvlkaw lnskgeeaak lskleivlga
      661 fhvlqdfegy akslpsqgpt kywlgvgspk sgyfgnhpwf nnledaevdk evcfinckig
      721 nedfvllpkd iktltvehcr nlkslsnfsv fheanelktc aiswceeiec vvdlslsscn
      781 slqnieilrl rsllnlhelv rveavastsh tptplgifts lqefyligcs sikklfpihl
      841 llgfqhleyi evkhckklek iiaeedeenq nvdrrgsitt ivfpklktlh liklpelksi
      901 cssrvripae slkylsiinc sklrkipfsi pllktgqpsp lsleygyvhp ktwwklvefd
      961 dpnakdilsp lvldyssned eela
//
LOCUS       XP_040942896             203 aa            linear   PLN 06-AUG-2024
DEFINITION  probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Gossypium
            hirsutum].
ACCESSION   XP_040942896
VERSION     XP_040942896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086962.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="probable NAD(P)H dehydrogenase (quinone)
                     FQR1-like 1"
                     /calculated_mol_wt=21625
     Region          3..200
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
     CDS             1..203
                     /gene="LOC107951781"
                     /coded_by="XM_041086962.1:235..846"
                     /db_xref="GeneID:107951781"
ORIGIN      
        1 matklyivyy smyghvekla eeikkgaasv egveaklwqv petlsdeilg kmsappksdv
       61 piitphdlae adgfifgfpt rfgmmsaqfk afmdatgglw rtqqlagkpa gifystgsqg
      121 ggqettplta itqlvhhgmi fvpigysfga gmfemeqvkg gspygagtya gdgtrmpsel
      181 klaqafhqgk yiagitkklk taa
//
LOCUS       XP_040942897             478 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH123 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942897
VERSION     XP_040942897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086963.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="transcription factor bHLH123 isoform X1"
                     /calculated_mol_wt=52611
     Region          361..413
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(361,364..365,367..368,372,389..390)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(370..371,374,377..378,381,390..391,394..395,398,401,
                     404..405,408,412..413)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..478
                     /gene="LOC107951780"
                     /coded_by="XM_041086963.1:264..1700"
                     /db_xref="GeneID:107951780"
ORIGIN      
        1 madefntgtn wwdssrtags sssssglnns fawatemvdi kaarspmdsv ssvsgssvvf
       61 hdnpklqvgl gpdhhhhhhh hhhppsdlqm mglglpsqam dwnqalllnr rgdksevsfr
      121 smlqdhnlna snanyqhqqq etggigssql hwrdkmftgd aelkqigrgf sldqsqfsph
      181 gsssdstvtc qslpsslqmd sstalygsps tilqrllgse nqpqqqqqqq ssyenrsmny
      241 qygaaaatsy gmntndqllp nalskvpqfl rssppkqqlh gqlhfsnnap fwnpsaaaaa
      301 smtdhvrpgf fpslqtqfqt gtfdekpkni sevretstvv kksgnepast krprnetpst
      361 mpafkvrkek mgdritalqq lvspfgktdt asvlseaiey ikflhaqvsq vlstpymkne
      421 atiqhhqqnp ekskdpaegp kqdlrsrglc lvpvsstfpl tnespvdfwt ptfggtfr
//
LOCUS       XP_040942898             477 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH123 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942898
VERSION     XP_040942898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086964.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..477
                     /product="transcription factor bHLH123 isoform X2"
                     /calculated_mol_wt=52483
     Region          361..412
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(361,364..365,367..368,372,389..390)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(370..371,374,377..378,381,390..391,394..395,398,401,
                     404..405,408,411..412)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..477
                     /gene="LOC107951780"
                     /coded_by="XM_041086964.1:263..1696"
                     /db_xref="GeneID:107951780"
ORIGIN      
        1 madefntgtn wwdssrtags sssssglnns fawatemvdi kaarspmdsv ssvsgssvvf
       61 hdnpklqvgl gpdhhhhhhh hhhppsdlqm mglglpsqam dwnqalllnr rgdksevsfr
      121 smlqdhnlna snanyqhqqq etggigssql hwrdkmftgd aelkqigrgf sldqsqfsph
      181 gsssdstvtc qslpsslqmd sstalygsps tilqrllgse nqpqqqqqqq ssyenrsmny
      241 qygaaaatsy gmntndqllp nalskvpqfl rssppkqqlh gqlhfsnnap fwnpsaaaaa
      301 smtdhvrpgf fpslqtqfqt gtfdekpkni sevretstvv kksgnepast krprnetpst
      361 mpafkvrkek mgdritalqq lvspfgktdt asvlseaiey ikflhaqvsv lstpymknea
      421 tiqhhqqnpe kskdpaegpk qdlrsrglcl vpvsstfplt nespvdfwtp tfggtfr
//
LOCUS       XP_016742403             475 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH123 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016742403
VERSION     XP_016742403.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886914.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742403.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..475
                     /product="transcription factor bHLH123 isoform X3"
                     /calculated_mol_wt=52228
     Region          358..410
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(358,361..362,364..365,369,386..387)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(367..368,371,374..375,378,387..388,391..392,395,398,
                     401..402,405,409..410)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..475
                     /gene="LOC107951780"
                     /coded_by="XM_016886914.2:276..1703"
                     /db_xref="GeneID:107951780"
ORIGIN      
        1 madefntgtn wwdssrtags sssssglnns fawatemvdi kaarspmdsv ssvsgssvvf
       61 hdnpklqvgl gpdhhhhhhh hhhppsdlqm mglglpsqam dwnqallrgd ksevsfrsml
      121 qdhnlnasna nyqhqqqetg gigssqlhwr dkmftgdael kqigrgfsld qsqfsphgss
      181 sdstvtcqsl psslqmdsst alygspstil qrllgsenqp qqqqqqqssy enrsmnyqyg
      241 aaaatsygmn tndqllpnal skvpqflrss ppkqqlhgql hfsnnapfwn psaaaaasmt
      301 dhvrpgffps lqtqfqtgtf dekpknisev retstvvkks gnepastkrp rnetpstmpa
      361 fkvrkekmgd ritalqqlvs pfgktdtasv lseaieyikf lhaqvsqvls tpymkneati
      421 qhhqqnpeks kdpaegpkqd lrsrglclvp vsstfpltne spvdfwtptf ggtfr
//
LOCUS       XP_016742404             474 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH123 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016742404
VERSION     XP_016742404.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742404.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..474
                     /product="transcription factor bHLH123 isoform X4"
                     /calculated_mol_wt=52100
     Region          358..409
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(358,361..362,364..365,369,386..387)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(367..368,371,374..375,378,387..388,391..392,395,398,
                     401..402,405,408..409)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..474
                     /gene="LOC107951780"
                     /coded_by="XM_016886915.2:276..1700"
                     /db_xref="GeneID:107951780"
ORIGIN      
        1 madefntgtn wwdssrtags sssssglnns fawatemvdi kaarspmdsv ssvsgssvvf
       61 hdnpklqvgl gpdhhhhhhh hhhppsdlqm mglglpsqam dwnqallrgd ksevsfrsml
      121 qdhnlnasna nyqhqqqetg gigssqlhwr dkmftgdael kqigrgfsld qsqfsphgss
      181 sdstvtcqsl psslqmdsst alygspstil qrllgsenqp qqqqqqqssy enrsmnyqyg
      241 aaaatsygmn tndqllpnal skvpqflrss ppkqqlhgql hfsnnapfwn psaaaaasmt
      301 dhvrpgffps lqtqfqtgtf dekpknisev retstvvkks gnepastkrp rnetpstmpa
      361 fkvrkekmgd ritalqqlvs pfgktdtasv lseaieyikf lhaqvsvlst pymkneatiq
      421 hhqqnpeksk dpaegpkqdl rsrglclvpv sstfpltnes pvdfwtptfg gtfr
//
LOCUS       XP_016742400             451 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 25 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016742400
VERSION     XP_016742400.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742400.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="WD repeat-containing protein 25 isoform X1"
                     /calculated_mol_wt=50320
     Region          <127..447
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          142..180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          186..221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          323..375
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          383..415
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..450
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..451
                     /gene="LOC107951778"
                     /coded_by="XM_016886911.2:111..1466"
                     /db_xref="GeneID:107951778"
ORIGIN      
        1 mdllfkaysn tsddepepep dpepkpvnhh hlpfrpskrp kseylfptld lqkreeaplp
       61 gryiskrera lagavsqahe pnpihqdhhv inqsvlgsis eldlphdvls smrhkpkgra
      121 qlsqipgkls valhghakav navhwspthv hllasagmdq ticiwnvwsr gqkkarvfsf
      181 hnaavkdvkw sqqgsfvlsc gydcssrlid vekgleslif rddqvvgvik fhpddsnlfl
      241 sggskgrlrl wdvrtgkvvh eyirglgpil dvefstdgkq fvsssdvsgc nisensiivw
      301 disrqvplsn evrdiflhhl vsiaeifmvy aeaytcpcvr yhpfdpyfva qsngnyiaif
      361 sskppfkldk ykryeshgvs gfpikcnfsl dgeklasgss dgsiylynsr ssvlvkkika
      421 yeeacvdiaf hpilsnvias cswngdvsvf e
//
LOCUS       XP_016742401             434 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016742401
VERSION     XP_016742401.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742401.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..434
                     /product="WD repeat-containing protein 25 isoform X2"
                     /calculated_mol_wt=48298
     Region          <127..430
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          142..180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          186..221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..312
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          319..358
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          366..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          408..433
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..434
                     /gene="LOC107951778"
                     /coded_by="XM_016886912.2:79..1383"
                     /db_xref="GeneID:107951778"
ORIGIN      
        1 mdllfkaysn tsddepepep dpepkpvnhh hlpfrpskrp kseylfptld lqkreeaplp
       61 gryiskrera lagavsqahe pnpihqdhhv inqsvlgsis eldlphdvls smrhkpkgra
      121 qlsqipgkls valhghakav navhwspthv hllasagmdq ticiwnvwsr gqkkarvfsf
      181 hnaavkdvkw sqqgsfvlsc gydcssrlid vekgleslif rddqvvgvik fhpddsnlfl
      241 sggskgrlrl wdvrtgkvvh eyirglgpil dvefstdgkq fvsssdvsgc nisensiivw
      301 disrqvplsn evyaeaytcp cvryhpfdpy fvaqsngnyi aifsskppfk ldkykryesh
      361 gvsgfpikcn fsldgeklas gssdgsiyly nsrssvlvkk ikayeeacvd iafhpilsnv
      421 iascswngdv svfe
//
LOCUS       XP_016742399             613 aa            linear   PLN 06-AUG-2024
DEFINITION  indole-3-acetic acid-amido synthetase GH3.6 [Gossypium hirsutum].
ACCESSION   XP_016742399
VERSION     XP_016742399.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886910.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..613
                     /product="indole-3-acetic acid-amido synthetase GH3.6"
                     /calculated_mol_wt=69298
     Region          1..611
                     /region_name="PLN02620"
                     /note="indole-3-acetic acid-amido synthetase"
                     /db_xref="CDD:166261"
     CDS             1..613
                     /gene="LOC107951777"
                     /coded_by="XM_016886910.2:152..1993"
                     /db_xref="GeneID:107951777"
ORIGIN      
        1 mpeapknthk pttdynlelk nkkilqfied vtsnadevqk kvleeilsrn ahveylqthg
       61 lnghtdretf ktimpvitye diqpyvdria ngdtspilss hpisefltss gtsggerklm
      121 ptieeelgrr sllysllmpv msqfvpgldk gkgmyflfik seaktpgglv arpvltsyyk
      181 sthfkdrpyd pytnytspne tilcpdsyqs mysqmlcglc qhkevlrvga vfasgfirai
      241 kflekhwrfl cndirtgtid sqitdqsvre avmkilkpdp qladfieaec skdswqgiit
      301 rlwpntkyvd vivtgtmsqy iptldyytng lplvctmyas secyfgvnln plckpsevsy
      361 tliptmayfe flpvqrnngv nssisvpktl nekeqqelvd lvdvklgqey elvvttysgl
      421 yryrvgdvlr vagfknnapq fnficrknvv lcidsdktde velqnavkna vnhflpfdat
      481 laeytsyadt ttipghyvly welslngttp ippsvfedcc ltieeslnsv yrqgrvcdks
      541 igpleikive pgtfdklmdy aislgasinq yktprcvkfa pivellnsra vssffspkcp
      601 kwfpghkqwi nmn
//
LOCUS       XP_040942900             613 aa            linear   PLN 06-AUG-2024
DEFINITION  indole-3-acetic acid-amido synthetase GH3.6 [Gossypium hirsutum].
ACCESSION   XP_040942900
VERSION     XP_040942900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086966.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..613
                     /product="indole-3-acetic acid-amido synthetase GH3.6"
                     /calculated_mol_wt=69111
     Region          1..612
                     /region_name="PLN02620"
                     /note="indole-3-acetic acid-amido synthetase"
                     /db_xref="CDD:166261"
     CDS             1..613
                     /gene="LOC107951774"
                     /coded_by="XM_041086966.1:181..2022"
                     /db_xref="GeneID:107951774"
ORIGIN      
        1 mpeapkntlk pttdyslelk nkktlqfied vtsnadevqk kvleeilsrn ahveylqtrg
       61 lnghtdretf kktmpvitye diqphidria ngdtspilss npisefltss gtsggerklm
      121 ptieeelgrr sllysllmpv msqfvpglde gkgmyflfik seaktpgglv arpvltsyyk
      181 sthfknrpyd pytnytspne tilcpdsyqs mysqmlcglc qhkevlrvga vfasgfirai
      241 kflekhwrll ckdirtgtid sqitdqsvre avmkilkpdp kladfieaec skdswqgiit
      301 rlwpntkyvd vivtgtmsqy iptldyysng lplvctmyas secyfgvnln plckpsevsy
      361 tlvptmayfe flrvqrnngv tssisvpktl nekeqqelvd lvdvklgqey elvvttysgl
      421 yryrvgdvlr vagfknnapq fnficrknvv lcidsdktde velqnavkna vnhllpfgat
      481 laeytsyadt ttipghyvly welslngntp ippsvfedcc ltieeslnsv yrqgrvcdks
      541 igpleikvve pgtfdklmdy aislgasinq yktprcvkfa pivellnsra vssyfspkcp
      601 kwfpghkqws nnn
//
LOCUS       XP_016743296             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016743296
VERSION     XP_016743296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887807.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18043
     Region          33..138
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..164
                     /gene="LOC107952604"
                     /coded_by="XM_016887807.2:43..537"
                     /db_xref="GeneID:107952604"
ORIGIN      
        1 mailrnkkss svytfvfslf pllfsishst sihdvlvsrg lpagllpkev ksytlaedgs
       61 levlldgpcl tkyenrvffd svvranltyg sligvvgltq eelflwlpvk diivddpksg
      121 lilfdigvah kqlslslfee pphckpqgml knqgrkekgl eavr
//
LOCUS       XP_016742395             372 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA cap guanine-N7 methyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016742395
VERSION     XP_016742395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886906.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..372
                     /product="mRNA cap guanine-N7 methyltransferase 1"
                     /calculated_mol_wt=42569
     Region          32..341
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(91..97,114..115,149..151,172)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..372
                     /gene="LOC107951770"
                     /coded_by="XM_016886906.2:110..1228"
                     /db_xref="GeneID:107951770"
ORIGIN      
        1 mkrgypesls sslgppqsrf khnpqgdaqf pedestkifa rkvadhysar tnqtleerea
       61 spiihlkkln nwiksvliql yarkgdavld lacgkggdli kwdkakveyy vgvdiaegsm
      121 edcrtryngd adhhqrrkkf tfparllcgd cfevrldkvl andapfdics cqfamhysws
      181 teararrala nvsallrpgg tfigtmpdan viikklreae gmafgnsvyw iqfdeefsdk
      241 kfkssspfgi kykfhledav dcpewivpfh lfkslaeeyg felvfvknsh efvheymkrp
      301 efielmrrlg algdgnrdqt tlspeeweva ylylafvlkk rgqpewtqan srkdkgqmqi
      361 skedilyiss dv
//
LOCUS       XP_040942901             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942901
VERSION     XP_040942901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086967.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..132
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14529
     CDS             1..132
                     /gene="LOC121213816"
                     /coded_by="XM_041086967.1:138..536"
                     /db_xref="GeneID:121213816"
ORIGIN      
        1 meekprrhgh gqlreeeppl paidhrtgrr tpattppfav agkpkkapff sflriesrsg
       61 vrkaeipmkr akierdlsvl plstaagnrc gkrhgggrqh grvgvvlvad nmgeweeasg
      121 slgfwdwawm lg
//
LOCUS       XP_016728910             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728910
VERSION     XP_016728910.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873421.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14317
     CDS             1..128
                     /gene="LOC107940013"
                     /coded_by="XM_016873421.2:273..659"
                     /db_xref="GeneID:107940013"
ORIGIN      
        1 mrsfldwvsc wsttpqvsir eevetppske etnslmpldt edlrkkkirv rtgtspqwkp
       61 tlrvitednv makktpseat kttvdkvgkr kttggsrskv hvrsynndtg rksvpvvlpa
      121 lsptpfmf
//
LOCUS       XP_040942903             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942903
VERSION     XP_040942903.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086969.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14317
     CDS             1..128
                     /gene="LOC107940013"
                     /coded_by="XM_041086969.1:154..540"
                     /db_xref="GeneID:107940013"
ORIGIN      
        1 mrsfldwvsc wsttpqvsir eevetppske etnslmpldt edlrkkkirv rtgtspqwkp
       61 tlrvitednv makktpseat kttvdkvgkr kttggsrskv hvrsynndtg rksvpvvlpa
      121 lsptpfmf
//
LOCUS       XP_016728909             535 aa            linear   PLN 06-AUG-2024
DEFINITION  organic cation/carnitine transporter 4 [Gossypium hirsutum].
ACCESSION   XP_016728909
VERSION     XP_016728909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873420.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..535
                     /product="organic cation/carnitine transporter 4"
                     /calculated_mol_wt=56940
     Region          100..515
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(117..118,121..122,125,149,200..201,203..205,208,224,
                     227..228,231,357,360..361,364..366,369,389,393,446..447,
                     451,455,471,474..475,478..479,482)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..535
                     /gene="LOC107940012"
                     /coded_by="XM_016873420.2:346..1953"
                     /db_xref="GeneID:107940012"
ORIGIN      
        1 manspgsnpi shgsslgapl lipskepgwd sgpgsepqkv ciddmlqnyc gefgywqlkh
       61 fvltslawal eafhtmvmif adrdpgwrcv gglgcdekes nvcglepgsw eweggpgsst
      121 vaqwglvcgq kykvglvqal ffggcmigag vfghlsdskl grkgsltavc ilnamfgclt
      181 slapdystyl llrfvtgfst ggvglcsfvl atepvgptkr gvagmstfyf fstgiallsg
      241 iayifpswra lyvassipsi lflvlvvpfi sesprwylvr gkmneamkim rtiananghh
      301 lpdgvslald deandasngn qiwkaatvek eaisgsivdv irspitrirl flavginftc
      361 svvyyglsln vvnletnlyl tvllnavaem paftitavll dkfgrkplai gtqwfsaifc
      421 fmgsltgnvg iskvirmccg llgifgmagt ynllfiytae lfptvvrnaa lgsatqaaqm
      481 gailapfvvi lgggfpflvf gvcgliggml asylpetlnk plydtmtgle egela
//
LOCUS       XP_016728911             545 aa            linear   PLN 06-AUG-2024
DEFINITION  (-)-germacrene D synthase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016728911
VERSION     XP_016728911.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873422.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728911.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="(-)-germacrene D synthase isoform X1"
                     /calculated_mol_wt=63032
     Region          9..542
                     /region_name="Terpene_cyclase_plant_C1"
                     /note="Plant Terpene Cyclases, Class 1; cd00684"
                     /db_xref="CDD:173832"
     Site            order(9..16,448..449,451..454,456..459,521..524)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     Site            order(260,269,290,292..294,297,301,372,438..439,441..442,
                     445,449,518,522,524)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173832"
     Site            order(297,301,441,445,449)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     Site            297..301
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173832"
     Site            441..449
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173832"
     CDS             1..545
                     /gene="LOC107940014"
                     /coded_by="XM_016873422.2:75..1712"
                     /db_xref="GeneID:107940014"
ORIGIN      
        1 mcsmsnvnrr svnyhpsiwg diflscpskm kidtatrqey eelkqeitrm lmvatdgssq
       61 kyrliatikr lgvsylfeke iedalqtnfh hheykadqtl eyaslqfrll rengfnaqse
      121 ifnnfkddkg nfkisltsdv kgllelyeas hllvhgehil dealafttth lelaqrigie
      181 rplsalvsha lkrpsrkalp rlearqyisl yqeddshdkt llkfakldfn llqnlhkeel
      241 skiskwwkel dfatklpfar drlvecyfwi lgvyfepqys fareimtkai vmastmddiy
      301 dvhgtyeele lftkaierwd tsyidglpay mkvfyealfd lyeemekvmt kqgksyrvqy
      361 aketmkqlsq ayfieakwyh enyvptveey mknalvssgy pmvtitsfvg mgdvvteetf
      421 nwasnnpkiv rassmiarlm deivshkfeq erghcasave cymkqhgvse ekaceelkkl
      481 idaawkdinq dmlfkparap fpvltcvlnl akvmdflyke gdgythvgnv tkagitsllv
      541 dpvpi
//
LOCUS       XP_040942904             538 aa            linear   PLN 06-AUG-2024
DEFINITION  (-)-germacrene D synthase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942904
VERSION     XP_040942904.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086970.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..538
                     /product="(-)-germacrene D synthase isoform X2"
                     /calculated_mol_wt=62212
     Region          9..535
                     /region_name="Terpene_cyclase_plant_C1"
                     /note="Plant Terpene Cyclases, Class 1; cd00684"
                     /db_xref="CDD:173832"
     Site            order(9..16,441..442,444..447,449..452,514..517)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     Site            order(260,269,290,292..294,297,301,365,431..432,434..435,
                     438,442,511,515,517)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173832"
     Site            order(297,301,434,438,442)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     Site            297..301
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173832"
     Site            434..442
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173832"
     CDS             1..538
                     /gene="LOC107940014"
                     /coded_by="XM_041086970.1:55..1671"
                     /db_xref="GeneID:107940014"
ORIGIN      
        1 mcsmsnvnrr svnyhpsiwg diflscpskm kidtatrqey eelkqeitrm lmvatdgssq
       61 kyrliatikr lgvsylfeke iedalqtnfh hheykadqtl eyaslqfrll rengfnaqse
      121 ifnnfkddkg nfkisltsdv kgllelyeas hllvhgehil dealafttth lelaqrigie
      181 rplsalvsha lkrpsrkalp rlearqyisl yqeddshdkt llkfakldfn llqnlhkeel
      241 skiskwwkel dfatklpfar drlvecyfwi lgvyfepqys fareimtkai vmastmddiy
      301 dvhgtyeele lftkaierwd tsyidglpay mkvfyealfd lyeemekvmt kqgksyrmkq
      361 lsqayfieak wyhenyvptv eeymknalvs sgypmvtits fvgmgdvvte etfnwasnnp
      421 kivrassmia rlmdeivshk feqerghcas avecymkqhg vseekaceel kklidaawkd
      481 inqdmlfkpa rapfpvltcv lnlakvmdfl ykegdgythv gnvtkagits llvdpvpi
//
LOCUS       XP_016728914             584 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 21 [Gossypium hirsutum].
ACCESSION   XP_016728914
VERSION     XP_016728914.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873425.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728914.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..584
                     /product="scarecrow-like protein 21"
                     /calculated_mol_wt=64891
     Region          211..580
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..584
                     /gene="LOC107940019"
                     /coded_by="XM_016873425.2:297..2051"
                     /db_xref="GeneID:107940019"
ORIGIN      
        1 mdshqlfgyg vtgaglsyst fpsipnrlfs slksdlgnsp nspfftpfdc dtnttlsdsq
       61 eqhsstenls glspscnssl esntyfhrls psldcrsesl lfssggtsym qdansghkvi
      121 ytlqeletal mapdenedlt tpsvshgess rpqtagqrsr awsrgrqgsl allpqtsfvs
      181 khrqstevsh vekrqksied fswlgippgn lkqlliacak vlsennmdef dkliakarga
      241 vsisgepvqr lgaymveglv arkeasgssi yralhcrepe gkdllsymqv lyeicpylkf
      301 ghmaangaia eacrtedrih iidfqiaqgt qwmtllqala arpggaphvr itgiddpisk
      361 yargggleav krrleaisek fnipvefqgm pvfapditrd mldvrpgeal avnfplqlhh
      421 tpdesvdvnn prdgllrmvk slspkvttlv eqesntntap flprfietle yylamfesid
      481 etlprdrker vnveehclar divniiaceg kerverhelf gkwksrltma gfrqyplssy
      541 vnsvirgllr cyskhyklve kdgamllgwk drnlisasaw hcds
//
LOCUS       XP_016731386             429 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium/calmodulin-regulated receptor-like kinase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016731386
VERSION     XP_016731386.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875897.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731386.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="calcium/calmodulin-regulated receptor-like
                     kinase 1"
                     /calculated_mol_wt=47699
     Region          118..378
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,194,236,238,
                     240..241,243,254,257,272..275)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,236,238,
                     240..241,243,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(122,192,194,236,238,240,257,272..275)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(253..259,266..268,271..275)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..429
                     /gene="LOC107942268"
                     /coded_by="XM_016875897.2:340..1629"
                     /db_xref="GeneID:107942268"
ORIGIN      
        1 mrgessglvi gisigvvigv llaifalfci ryhrkrsqig nsssrraati pirangadsc
       61 nmlsdstmgp espvkcgrng msmwleglrr snvvsvsgip eysykdlqka tynfttligr
      121 gafgpvykaq mltgetvavk vlatdskqge kefqtevmll grlhhrnivn lvgycaekgq
      181 hmlvyvymsk gslashlyse nleplswnlr vyialdvarg leylhdgaap pvihrdikss
      241 nilldqsmra rvadlglsre emvdkhaani rgtfgyldpe yistrtftkk sdvysfgvll
      301 feliagrnpl qglmeyvela amstegkvgw eeivdsrldg kfdlqelnei aalaykcvnr
      361 vpkkrpsmrd ivqvltrilk trhrkkhqks lsatadevlv dieqgetknp itehqreesm
      421 dsaadtfem
//
LOCUS       XP_016731387             429 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium/calmodulin-regulated receptor-like kinase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016731387
VERSION     XP_016731387.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731387.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="calcium/calmodulin-regulated receptor-like
                     kinase 1"
                     /calculated_mol_wt=47699
     Region          118..378
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,194,236,238,
                     240..241,243,254,257,272..275)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(118..122,126,138,140,169,185..188,192,236,238,
                     240..241,243,254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(122,192,194,236,238,240,257,272..275)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(253..259,266..268,271..275)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..429
                     /gene="LOC107942268"
                     /coded_by="XM_016875898.2:145..1434"
                     /db_xref="GeneID:107942268"
ORIGIN      
        1 mrgessglvi gisigvvigv llaifalfci ryhrkrsqig nsssrraati pirangadsc
       61 nmlsdstmgp espvkcgrng msmwleglrr snvvsvsgip eysykdlqka tynfttligr
      121 gafgpvykaq mltgetvavk vlatdskqge kefqtevmll grlhhrnivn lvgycaekgq
      181 hmlvyvymsk gslashlyse nleplswnlr vyialdvarg leylhdgaap pvihrdikss
      241 nilldqsmra rvadlglsre emvdkhaani rgtfgyldpe yistrtftkk sdvysfgvll
      301 feliagrnpl qglmeyvela amstegkvgw eeivdsrldg kfdlqelnei aalaykcvnr
      361 vpkkrpsmrd ivqvltrilk trhrkkhqks lsatadevlv dieqgetknp itehqreesm
      421 dsaadtfem
//
LOCUS       XP_016731384             202 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L24, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016731384
VERSION     XP_016731384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875895.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="50S ribosomal protein L24, chloroplastic"
                     /calculated_mol_wt=22106
     Region          68..170
                     /region_name="RplX"
                     /note="Ribosomal protein L24 [Translation, ribosomal
                     structure and biogenesis]; COG0198"
                     /db_xref="CDD:439968"
     CDS             1..202
                     /gene="LOC107942266"
                     /coded_by="XM_016875895.2:134..742"
                     /db_xref="GeneID:107942266"
ORIGIN      
        1 maamaalqss mtalslssns flgqrlsipp slsplhikpr enpclivvkl krwerkeckp
       61 nslpvlhkmh vkvgdtikvi sgrdkgkige iskifkhnst ivvkdinlkt khmksrgedq
      121 pgqiikieap ihssnvmlys kekevtsrvg hkvlddgkkv ryliktgeil dsdenwkklk
      181 eaakekteva aaapaadtga as
//
LOCUS       XP_016731389             134 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl carrier protein 2, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016731389
VERSION     XP_016731389.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875900.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731389.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="acyl carrier protein 2, mitochondrial"
                     /calculated_mol_wt=14685
     Region          <50..134
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
     CDS             1..134
                     /gene="LOC107942271"
                     /coded_by="XM_016875900.2:175..579"
                     /db_xref="GeneID:107942271"
ORIGIN      
        1 maavrgvvlk hlrvnatsls llrnpkpipn ghgaltfnai rrrfsddvmg sfldksevtd
       61 rvvsvvknfq kidpskvtpn ahfqedfgld sldtvevvma leeefgfeip dneadkisti
      121 shavefiash pqak
//
LOCUS       XP_016731388             134 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl carrier protein 2, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016731388
VERSION     XP_016731388.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731388.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="acyl carrier protein 2, mitochondrial"
                     /calculated_mol_wt=14718
     Region          <50..134
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
     CDS             1..134
                     /gene="LOC107942270"
                     /coded_by="XM_016875899.2:210..614"
                     /db_xref="GeneID:107942270"
ORIGIN      
        1 maavreallk rlrvnatsls llrnpkpsln glfaltfnav hrrfsddvmg sfldksevtd
       61 rvasvvknfq kvdpskvtpn ahfqndlgld nldtvevvma leeefgfeip dneadkigti
      121 nhavefiash pqak
//
LOCUS       XP_040942905             352 aa            linear   PLN 06-AUG-2024
DEFINITION  putative anthocyanidin reductase [Gossypium hirsutum].
ACCESSION   XP_040942905
VERSION     XP_040942905.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086971.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="putative anthocyanidin reductase"
                     /calculated_mol_wt=38377
     Region          9..350
                     /region_name="PLN02896"
                     /note="cinnamyl-alcohol dehydrogenase"
                     /db_xref="CDD:178484"
     CDS             1..352
                     /gene="LOC107942267"
                     /coded_by="XM_041086971.1:163..1221"
                     /db_xref="GeneID:107942267"
ORIGIN      
        1 megdlsapee ktevaasptc cvtgatgyig swlvklller gykvhatvrn pekalhllql
       61 wnggdrlrlf kadlleegsf deavkgcngv fhvaasmefd antnetiesy vrsniidpai
      121 kgtenllesc lksktvkrvv ftssistita kdsngnwrsv vdescqttid pvlnakasgw
      181 vyvlskllte eaafkfanen aidlvsvitt tvagpflttt ipssiqvlls pitgdpkyls
      241 ilsavkarmg sialvhiedi csahiflmeh draegkyicc acsspmyeli nhlaqenpsl
      301 diqrleagek stklpeissr klkdlgftyk hgiediihqt itacvdygfl ki
//
LOCUS       XP_016720179             431 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720179
VERSION     XP_016720179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864690.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..431
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46660
     CDS             1..431
                     /gene="LOC107932630"
                     /coded_by="XM_016864690.2:330..1625"
                     /db_xref="GeneID:107932630"
ORIGIN      
        1 mptvwfslkr slhcksepsd vhdpktrkql stiltrkagr sgcsrsianl kdvihgskrh
       61 lekppscspr sigsseflnp ithevilsns rcelkitgfg gfqdsltngg nmdanggggg
      121 ggsgggstfv gtlrpgtpgp gghptmhyfn psfknssttt pprkspflvs erkgcggngh
      181 ssnrvpldad sngsstvtch kcgeqfskwe aaethhlskh avtelvegds srkiveiicr
      241 tswlksenhc griervlkvh nmqktlarfe dyreivkika sklpkkhprc iadgnellrf
      301 ygttvacslg lngssslcis ekccvcriir ngfsakkelk eglgvfttst sgrafesiqi
      361 leddpsirka livcrviagr vhrpleniqe magqtgfdsl agkvglysni eelyllnpra
      421 llpcfvvick p
//
LOCUS       XP_016720181             431 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720181
VERSION     XP_016720181.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864692.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..431
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46660
     CDS             1..431
                     /gene="LOC107932630"
                     /coded_by="XM_016864692.2:325..1620"
                     /db_xref="GeneID:107932630"
ORIGIN      
        1 mptvwfslkr slhcksepsd vhdpktrkql stiltrkagr sgcsrsianl kdvihgskrh
       61 lekppscspr sigsseflnp ithevilsns rcelkitgfg gfqdsltngg nmdanggggg
      121 ggsgggstfv gtlrpgtpgp gghptmhyfn psfknssttt pprkspflvs erkgcggngh
      181 ssnrvpldad sngsstvtch kcgeqfskwe aaethhlskh avtelvegds srkiveiicr
      241 tswlksenhc griervlkvh nmqktlarfe dyreivkika sklpkkhprc iadgnellrf
      301 ygttvacslg lngssslcis ekccvcriir ngfsakkelk eglgvfttst sgrafesiqi
      361 leddpsirka livcrviagr vhrpleniqe magqtgfdsl agkvglysni eelyllnpra
      421 llpcfvvick p
//
LOCUS       XP_016720180             431 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720180
VERSION     XP_016720180.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864691.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..431
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46660
     CDS             1..431
                     /gene="LOC107932630"
                     /coded_by="XM_016864691.2:348..1643"
                     /db_xref="GeneID:107932630"
ORIGIN      
        1 mptvwfslkr slhcksepsd vhdpktrkql stiltrkagr sgcsrsianl kdvihgskrh
       61 lekppscspr sigsseflnp ithevilsns rcelkitgfg gfqdsltngg nmdanggggg
      121 ggsgggstfv gtlrpgtpgp gghptmhyfn psfknssttt pprkspflvs erkgcggngh
      181 ssnrvpldad sngsstvtch kcgeqfskwe aaethhlskh avtelvegds srkiveiicr
      241 tswlksenhc griervlkvh nmqktlarfe dyreivkika sklpkkhprc iadgnellrf
      301 ygttvacslg lngssslcis ekccvcriir ngfsakkelk eglgvfttst sgrafesiqi
      361 leddpsirka livcrviagr vhrpleniqe magqtgfdsl agkvglysni eelyllnpra
      421 llpcfvvick p
//
LOCUS       XP_016720170             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720170
VERSION     XP_016720170.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864681.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13806
     Region          20..108
                     /region_name="DUF1218"
                     /note="Protein of unknown function (DUF1218); pfam06749"
                     /db_xref="CDD:462000"
     CDS             1..128
                     /gene="LOC107932620"
                     /coded_by="XM_016864681.2:439..825"
                     /db_xref="GeneID:107932620"
ORIGIN      
        1 mlrfeceqpn nkafklglia vvllasshif skllggclcm ccteklekss anrkfwfgcl
       61 vlswivvavg fpslvvgmme naklkgsclv lhhhflfvgg ilcfvhgils vglyisanvs
      121 fqnevavg
//
LOCUS       XP_016720171             198 aa            linear   PLN 06-AUG-2024
DEFINITION  21.7 kDa class VI heat shock protein [Gossypium hirsutum].
ACCESSION   XP_016720171
VERSION     XP_016720171.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864682.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720171.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..198
                     /product="21.7 kDa class VI heat shock protein"
                     /calculated_mol_wt=22705
     Region          87..179
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..198
                     /gene="LOC107932622"
                     /coded_by="XM_016864682.2:274..870"
                     /db_xref="GeneID:107932622"
ORIGIN      
        1 mssciklevq tddqtpqkwc islhedvlkr llsqqgspit mhkvfgegsl fspllfgkff
       61 dpsdafplwd fdsdtllynl rnsgkttvdw fhtdlayvlk aplpgvgktn iqihvekgki
      121 meisgqvkqq regkakdwrs cnwwlygyvr rlelpedadc rkieafltng vileiriprn
      181 plyfgtlemk iqqpkise
//
LOCUS       XP_016720149             802 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14N isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016720149
VERSION     XP_016720149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864660.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..802
                     /product="kinesin-like protein KIN-14N isoform X1"
                     /calculated_mol_wt=90662
     Region          <123..>390
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          442..783
                     /region_name="KISc_C_terminal"
                     /note="Kinesin motor domain, KIFC2/KIFC3/ncd-like
                     carboxy-terminal kinesins; cd01366"
                     /db_xref="CDD:276817"
     Site            order(452,529,532,534..537,687)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276817"
     Site            order(734,737,740)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276817"
     CDS             1..802
                     /gene="LOC107932605"
                     /coded_by="XM_016864660.2:305..2713"
                     /db_xref="GeneID:107932605"
ORIGIN      
        1 mgsknqnkpp fqhntalttt stitpsslkk kyiadvvsed kgqrlgfekm vgtanngrlr
       61 lafslvngsq dldlssapas nagsecggie ftredvealv nekmkyknkf nykercenmm
      121 eyikrlrlci kwfqelegey afeqeklrna lelterrcse mevalnnkee elnliilelr
      181 kslaslqdkl akeesekkaa vdsltkekea rtsiersqas lseelekvqg eldganqria
      241 sindmykllq eynsslqlyn sklqtdldta hetikrgeke rsaivenlht lrgqhkslqd
      301 qlmssiasqd evmkqkdall nevaclrmel hqtredrehy qqqvqslaae vskykelatn
      361 sseleekcls qgnqiqilhd qlavaerklq msdmsifetr nefegqkkli eelqnrleda
      421 efkliegekl rkklhntile lkgnirvfcr vrpqlpddss snqakvfsyp tsmeylgrgi
      481 dmtqnaqkhs ftfdkvfmpd asqeevfvei sqlvqsaldg ykvcifaygq tgsgktytmm
      541 gkpgqpdekg liprsleqif qtkqalqpqg wryemqvsml eiynetirdl lstnkdasri
      601 engvagkqyt ikhdangntq vsdltivdvq ssrevkylld raahsrsvgk tqmneqssrs
      661 hfvftmritg vnesteqqvq gvlnlidlag serlsksgst gdrlketqai nkslssladv
      721 ifalakkedh vpfrnsklty llqpclggds ktlmfvnisp epssageslc slrfaarvna
      781 ceigtprrql nmrtsesrls yg
//
LOCUS       XP_016720151             753 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14N isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016720151
VERSION     XP_016720151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864662.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..753
                     /product="kinesin-like protein KIN-14N isoform X2"
                     /calculated_mol_wt=85257
     Region          <74..>341
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          393..734
                     /region_name="KISc_C_terminal"
                     /note="Kinesin motor domain, KIFC2/KIFC3/ncd-like
                     carboxy-terminal kinesins; cd01366"
                     /db_xref="CDD:276817"
     Site            order(403,480,483,485..488,638)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276817"
     Site            order(685,688,691)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276817"
     CDS             1..753
                     /gene="LOC107932605"
                     /coded_by="XM_016864662.2:189..2450"
                     /db_xref="GeneID:107932605"
ORIGIN      
        1 mvgtanngrl rlafslvngs qdldlssapa snagsecggi eftredveal vnekmkyknk
       61 fnykercenm meyikrlrlc ikwfqelege yafeqeklrn alelterrcs emevalnnke
      121 eelnliilel rkslaslqdk lakeesekka avdsltkeke artsiersqa slseelekvq
      181 geldganqri asindmykll qeynsslqly nsklqtdldt ahetikrgek ersaivenlh
      241 tlrgqhkslq dqlmssiasq devmkqkdal lnevaclrme lhqtredreh yqqqvqslaa
      301 evskykelat nsseleekcl sqgnqiqilh dqlavaerkl qmsdmsifet rnefegqkkl
      361 ieelqnrled aefkliegek lrkklhntil elkgnirvfc rvrpqlpdds ssnqakvfsy
      421 ptsmeylgrg idmtqnaqkh sftfdkvfmp dasqeevfve isqlvqsald gykvcifayg
      481 qtgsgktytm mgkpgqpdek gliprsleqi fqtkqalqpq gwryemqvsm leiynetird
      541 llstnkdasr iengvagkqy tikhdangnt qvsdltivdv qssrevkyll draahsrsvg
      601 ktqmneqssr shfvftmrit gvnesteqqv qgvlnlidla gserlsksgs tgdrlketqa
      661 inkslsslad vifalakked hvpfrnsklt yllqpclggd sktlmfvnis pepssagesl
      721 cslrfaarvn aceigtprrq lnmrtsesrl syg
//
LOCUS       XP_016720164             127 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin-like protein CXXS1 [Gossypium hirsutum].
ACCESSION   XP_016720164
VERSION     XP_016720164.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864675.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..127
                     /product="thioredoxin-like protein CXXS1"
                     /calculated_mol_wt=14302
     Region          27..114
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(44,47)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..127
                     /gene="LOC107932615"
                     /coded_by="XM_016864675.2:56..439"
                     /db_xref="GeneID:107932615"
ORIGIN      
        1 mdrqskkpks rvvkinsqht wdffitqann qacpvmvhft aawcvpsvam npffeelalc
       61 yqdilflsvd vddvkeaask meitamptfl lmrqgtqidk lvgakpdeik kmvdaftpqf
      121 rsskisi
//
LOCUS       XP_016720182             238 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor ILR3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016720182
VERSION     XP_016720182.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864693.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..238
                     /product="transcription factor ILR3 isoform X1"
                     /calculated_mol_wt=26144
     Region          80..155
                     /region_name="bHLH_AtILR3_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein IAA-leucine resistant 3
                     (ILR3) and similar proteins; cd11446"
                     /db_xref="CDD:381452"
     Site            order(80..81,84..85,87..88,92,111..112)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381452"
     Site            order(90..91,94,97..98,101,112..113,116..117,120,123,
                     126..127,130,133..134,136..137,140,143..144,147,150..151)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381452"
     Region          <141..175
                     /region_name="DUF4140"
                     /note="N-terminal domain of unknown function (DUF4140);
                     pfam13600"
                     /db_xref="CDD:463931"
     CDS             1..238
                     /gene="LOC107932631"
                     /coded_by="XM_016864693.2:277..993"
                     /db_xref="GeneID:107932631"
ORIGIN      
        1 mvfpensnyw shfdyatlid dipvpddpya gfawstqpid apsnvvsvei dgsfgdsdgl
       61 kesgskkrvr sescnasssk acreklrrdr lndkfmelgs ilepgrppkt dksailidav
      121 rmvtqlrgea qklkdsntsl qerikelkse knelrdekqr lkaekerleq qlkamnaqps
      181 fmppappaip aafaaapgqa pgnklvplig ypgvamwqfm ppaavdtsqd hvlrppva
//
LOCUS       XP_016720183             212 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor ILR3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016720183
VERSION     XP_016720183.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864694.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="transcription factor ILR3 isoform X2"
                     /calculated_mol_wt=23152
     Region          68..129
                     /region_name="bHLH_AtILR3_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein IAA-leucine resistant 3
                     (ILR3) and similar proteins; cd11446"
                     /db_xref="CDD:381452"
     Site            order(68,71..72,75,86..87,90..91,94,97,100..101,104,
                     107..108,110..111,114,117..118,121,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381452"
     Region          <115..149
                     /region_name="DUF4140"
                     /note="N-terminal domain of unknown function (DUF4140);
                     pfam13600"
                     /db_xref="CDD:463931"
     CDS             1..212
                     /gene="LOC107932631"
                     /coded_by="XM_016864694.2:214..852"
                     /db_xref="GeneID:107932631"
ORIGIN      
        1 mvfpensnyw shfdyatlid dipvpddpya gfawstqpid apsnvvsvei dgsfgdsdgl
       61 kesgskkrfm elgsilepgr ppktdksail idavrmvtql rgeaqklkds ntslqerike
      121 lkseknelrd ekqrlkaeke rleqqlkamn aqpsfmppap paipaafaaa pgqapgnklv
      181 pligypgvam wqfmppaavd tsqdhvlrpp va
//
LOCUS       XP_040942906             534 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: probable galacturonosyltransferase 12
            [Gossypium hirsutum].
ACCESSION   XP_040942906
VERSION     XP_040942906.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086972.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..534
                     /product="LOW QUALITY PROTEIN: probable
                     galacturonosyltransferase 12"
                     /calculated_mol_wt=60513
     Region          1..534
                     /region_name="PLN02659"
                     /note="Probable galacturonosyltransferase"
                     /db_xref="CDD:215356"
     CDS             1..534
                     /gene="LOC107932626"
                     /coded_by="XM_041086972.1:163..1767"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107932626"
ORIGIN      
        1 mqlhispslr hvtvlpgkgv refikvkvgs rkvsyrmlfy sllfftfllr fvfvlstids
       61 idgdhpkcst igclgkrigp rilgrriesn vpeviyrile epvskdevlg kadvpqtlqe
      121 fmsemkqsrs dakafalrlr emivlleqrt rtakiqeyly rhvasssipk qlhclalkla
      181 nehsnnaaar lqlpsaelvp alvdnsyfhf vlasdnvlaa svvaaslvkn alrpekfvlh
      241 iitdrktysp mqawfslhpl dpaiievkal hqfdwlskgk vpvleamekd qrvrsqfrxg
      301 ssaivannte kpqviaaklq alspkynslm nhirihlpel fpslnkvvfl dddiviqtdl
      361 splwdidmng kvngavetcr gedsfvmskr fksylnfshp liaknfdpne cawaygmnif
      421 dleawrktni sltyyhwlee nfksdlslwq lgtlppglia fyghvhvidp fwhmlglgyq
      481 dnttladaet agvihfngra kpwldiafpq lrplwakyid fsdkfikgch iras
//
LOCUS       XP_016720175             345 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720175
VERSION     XP_016720175.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864686.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..345
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38236
     Region          63..289
                     /region_name="DUF1995"
                     /note="Domain of unknown function (DUF1995); pfam09353"
                     /db_xref="CDD:430551"
     CDS             1..345
                     /gene="LOC107932627"
                     /coded_by="XM_016864686.2:114..1151"
                     /db_xref="GeneID:107932627"
ORIGIN      
        1 masnflklhl qtsktqipfs pthpnyhshl sfinpnasyn hkfptltlha slispstpps
       61 sreeailqsk tclstclekp lnnpklvgkl kklkqprfqv eiplvddsps slvqlaldif
      121 kdmslkrkgs lveilvlwpd vrlkeagiqa fesssslshi ehidlpsvsk nnrilspsdv
      181 avflapepsq lalikaiads lypkplvifn pkwgseeend fgdlkgfvgs feviysfmgl
      241 evrgvlskrk gmvfkcvtdg vlsgeqwsvl veedgelkvv srfksrpgie evenvlynlm
      301 ainspitksa kflrdlvsnv tgkkspmlty iyvvtwtyqa gklal
//
LOCUS       XP_016720177             827 aa            linear   PLN 06-AUG-2024
DEFINITION  autophagy-related protein 18f [Gossypium hirsutum].
ACCESSION   XP_016720177
VERSION     XP_016720177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864688.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..827
                     /product="autophagy-related protein 18f"
                     /calculated_mol_wt=88601
     Region          <348..>459
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          366..400
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          380..431
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          516..749
                     /region_name="BCAS3"
                     /note="Breast carcinoma amplified sequence 3; pfam12490"
                     /db_xref="CDD:463605"
     CDS             1..827
                     /gene="LOC107932628"
                     /coded_by="XM_016864688.2:737..3220"
                     /db_xref="GeneID:107932628"
ORIGIN      
        1 mrnsgdgqgq srtqsggvvs rsarssfrai ssylrivssg astvarsavs vassivdred
       61 dsgydqvhwa gfdklegegd virqvlllgy lsgfqvwdve eadnvrdlvs kcdgpvsfmq
      121 mlpkpapamr pddkfadsrp llvvsadgsl srdthiqdga yngsipnnhd sgngsvvpti
      181 irfyslrsqs yvhllkfrsa vysvrcssri vavgqaaqih cfgaaklere ytiltnpivs
      241 gfpgsggigy gplavgprwl ayggspvpgs dcgrvspqhl tpsasfpgfs sngslvahya
      301 kesskqlasg ivtlgdmgyk klsrylpdsy nylqsggpgw kgngtvnghl vdvdnvgmvi
      361 vrdiaskvvi aqfrahkhpi salcfdpsgt llvtasvqgh sinvfkimpg lqgsssacna
      421 pasyahlyrl qrgitnaviq disfsddsnw imisssrgts hlfainpmgg svssqsgdad
      481 fahknsslgv mtkpqvpwlp nlgvqtptqt slcasgpplt lsvvsrikng nngwrgtvsg
      541 aaaaatgrts plsgaiassf hncknnkflf sesssskaky hllvfspsgc liqyalrlaa
      601 ehdstpvvtg lntthestad sdgrlvvdai qkwnicqkht rrerednvdi ygengttdng
      661 kvypeevkeg styldpsytv kkananakek hnlyiseael qmhearmplw akpeiyfqsm
      721 amdgikmaee nafggeieie nfsaqtiear sknlvpvfdy vqtpkfqqts nnngcllhqr
      781 selpengrls crsssgsldf mtengaavae lhtgiketgl ngpnmpl
//
LOCUS       XP_040942907             136 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SUPPRESSOR OF GENE SILENCING 3 [Gossypium hirsutum].
ACCESSION   XP_040942907
VERSION     XP_040942907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086973.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="protein SUPPRESSOR OF GENE SILENCING 3"
                     /calculated_mol_wt=15841
     CDS             1..136
                     /gene="LOC121213819"
                     /coded_by="XM_041086973.1:382..792"
                     /db_xref="GeneID:121213819"
ORIGIN      
        1 mnyedyrlsi gfsvinlevd kekwisksns srnesnlsmk qgmrrkrvlr rcnsksvrrs
       61 ssltpilqmq rntgaemqaf vaerdklika hekkmvsmre rhwqeevele kefdaelshl
      121 mekytldgsk vnagnt
//
LOCUS       XP_040942908             136 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SUPPRESSOR OF GENE SILENCING 3 [Gossypium hirsutum].
ACCESSION   XP_040942908
VERSION     XP_040942908.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086974.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="protein SUPPRESSOR OF GENE SILENCING 3"
                     /calculated_mol_wt=15841
     CDS             1..136
                     /gene="LOC121213819"
                     /coded_by="XM_041086974.1:391..801"
                     /db_xref="GeneID:121213819"
ORIGIN      
        1 mnyedyrlsi gfsvinlevd kekwisksns srnesnlsmk qgmrrkrvlr rcnsksvrrs
       61 ssltpilqmq rntgaemqaf vaerdklika hekkmvsmre rhwqeevele kefdaelshl
      121 mekytldgsk vnagnt
//
LOCUS       XP_016689299            1207 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016689299
VERSION     XP_016689299.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833810.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016689299.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1207
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=132169
     Region          1..>95
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     CDS             1..1207
                     /gene="LOC107906724"
                     /coded_by="XM_016833810.2:340..3963"
                     /db_xref="GeneID:107906724"
ORIGIN      
        1 mesilarale ytlkywlksf sryqfklqgr tvqlsnldin gdvlhasmgl ppalnvatak
       61 vgkleiilpy vsnvqiepiv vqidrldlvl eensdvdspr sssgmqssts sgkgsgygfa
      121 dkiadgmtiq vqtvnlllet rggtrakgga awappmasit mrnillyttn enwqavnlke
      181 ardfssnknf iyvfkklewe slsidllphp dmfsdanlar sqvgstqrdd dgakrvffgg
      241 erflegisge ayitvqrtel naalglevql hvteavcpal sepglrallr fltglyvcln
      301 rgdvdlnaqq rsvesagrsl vsvvvdhifl cikdnefqle llmqsllfsr ssvsdgensr
      361 hlskvmvggl flrdtfsrpp ctlvqpsmea vtdsclripn fgkdfcppiy plaeqqwqlt
      421 vgvplialhs lqvkpsplpp sfasqtvidc qplmihlqee sclrissfla dgivvnpgsi
      481 lpdssvnslv ftlkeldisv pldigkmdnp gggdnhirpk sfagarlhfe kvffsespsl
      541 klkllnlekd pacfclwdgq pidasmkkwt agasqlslsl ettagltgvq sslhwssglw
      601 kcvelkeasi elamvsadgs pltvvpppgg vvrigvaceq fmsntsveql ffvldlygyi
      661 grvsekiava gknkrpnrnm ddtlggrlme kvpsdtavsl avnvlqlrfl esysldiqgt
      721 plvqfignnl flkvshrtlg gamavsstlc weivqvdcve tegnvvhnng mlvdsvengs
      781 lvtgngfspl ravfwvhnkq kclssgkasv ipfldisivh vipfderdke chslsvsaci
      841 sgvrlgggmn yteallhrfg iigpdggpsm elskglenls sgplskllkp safvdndlvd
      901 ggtlggekdd kflqlgmpdd vdvsielqdw lfalegvqem aeswwfekev ldreqrcwhm
      961 tfrslqvkak gspkdfpdgk gisngirryp velvtvcveg letfkpqaqr slspangfke
     1021 sfeilgginl evhmlisedn venetvnwvv enmkfsvkqp ieaivtkeel qhlaflckse
     1081 vdsmgriaag vlrllklenl lgkdaidkls nlgierfdki fssdklnrgn sagsigqspl
     1141 skvineeqrs tialleeavl dsqakcatlv telsnaesse enltdikelr qkldrmqilv
     1201 aqlqgqm
//
LOCUS       XP_016689301            1081 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016689301
VERSION     XP_016689301.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833812.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016689301.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1081
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=118465
     CDS             1..1081
                     /gene="LOC107906724"
                     /coded_by="XM_016833812.2:63..3308"
                     /db_xref="GeneID:107906724"
ORIGIN      
        1 mtiqvqtvnl lletrggtra kggaawappm asitmrnill yttnenwqav nlkeardfss
       61 nknfiyvfkk leweslsidl lphpdmfsda nlarsqvgst qrdddgakrv ffggerfleg
      121 isgeayitvq rtelnaalgl evqlhvteav cpalsepglr allrfltgly vclnrgdvdl
      181 naqqrsvesa grslvsvvvd hiflcikdne fqlellmqsl lfsrssvsdg ensrhlskvm
      241 vgglflrdtf srppctlvqp smeavtdscl ripnfgkdfc ppiyplaeqq wqltvgvpli
      301 alhslqvkps plppsfasqt vidcqplmih lqeesclris sfladgivvn pgsilpdssv
      361 nslvftlkel disvpldigk mdnpgggdnh irpksfagar lhfekvffse spslklklln
      421 lekdpacfcl wdgqpidasm kkwtagasql slslettagl tgvqsslhws sglwkcvelk
      481 easielamvs adgspltvvp ppggvvrigv aceqfmsnts veqlffvldl ygyigrvsek
      541 iavagknkrp nrnmddtlgg rlmekvpsdt avslavnvlq lrflesysld iqgtplvqfi
      601 gnnlflkvsh rtlggamavs stlcweivqv dcvetegnvv hnngmlvdsv engslvtgng
      661 fsplravfwv hnkqkclssg kasvipfldi sivhvipfde rdkechslsv sacisgvrlg
      721 ggmnyteall hrfgiigpdg gpsmelskgl enlssgplsk llkpsafvdn dlvdggtlgg
      781 ekddkflqlg mpddvdvsie lqdwlfaleg vqemaeswwf ekevldreqr cwhmtfrslq
      841 vkakgspkdf pdgkgisngi rrypvelvtv cvegletfkp qaqrslspan gfkesfeilg
      901 ginlevhmli sednvenetv nwvvenmkfs vkqpieaivt keelqhlafl cksevdsmgr
      961 iaagvlrllk lenllgkdai dklsnlgier fdkifssdkl nrgnsagsig qsplskvine
     1021 eqrstialle eavldsqakc atlvtelsna esseenltdi kelrqkldrm qilvaqlqgq
     1081 m
//
LOCUS       XP_016715367             576 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ACCELERATED CELL DEATH 6 [Gossypium hirsutum].
ACCESSION   XP_016715367
VERSION     XP_016715367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859878.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..576
                     /product="protein ACCELERATED CELL DEATH 6"
                     /calculated_mol_wt=63503
     Region          5..308
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          35..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(36,40..41,44..46,48..49,53,56,66,68,70,74..75,
                     78..80,82..83,86,89,100,102,104,108..109,112..114,
                     116..117,121,124)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          68..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(170,172,176..177,180..182,184..185,190,193,202,204,
                     206,210..211,214..216,218..219,223,226,236,238,240,
                     244..245,248..250,252..253,257)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          170..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          277..>347
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          308..337
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          402..510
                     /region_name="PGG"
                     /note="Domain of unknown function; pfam13962"
                     /db_xref="CDD:433609"
     CDS             1..576
                     /gene="LOC107928624"
                     /coded_by="XM_016859878.2:111..1841"
                     /db_xref="GeneID:107928624"
ORIGIN      
        1 mdqqflmaar tgnlnlikqf idaetnilna ttpqgntalh maarfghkdl veqiinwhpn
       61 lihktnlnge tpfhvaakag rfdvillfka tvediarvrd khgdtplhca vrnnhklviw
      121 llvdgdqeal rlvnnagesp lvvaidlglt nvahsiifgn pstldhrgnn gqtplhravl
      181 srdlaivdri lvlkpelitm qdgkgrnplh yavslgdyem vkkllecnss aayqvdnnrq
      241 iplhfaakng qvsllkllln pcpdtvemin neqrnilhls akngymnvvl yvldlpeaed
      301 lvngsdiagn tplhlaamnf hsnvvyflsr nskvnirvmn qnsqtaldvv ysiedggmel
      361 qkhltlkalk ssytkragdl lqdggfvdtd vektnkigqk sremattmll matliatftf
      421 taaftipggf knngpdegms tllgksafka fvvtdsiaft ssmtaavlvf wsssyqvtes
      481 fmdtlpfaia ftwialvama lafvtglfvv lsktlwlail vcfigcaspa ilylfgplfl
      541 lvfdrlsssp tslarrrnil ednpflfifr ltkmiy
//
LOCUS       XP_016715354             858 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016715354
VERSION     XP_016715354.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859865.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715354.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..858
                     /product="pentatricopeptide repeat-containing protein
                     At4g04790, mitochondrial isoform X1"
                     /calculated_mol_wt=96566
     Region          160..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          192..229
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          412..439
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <478..>805
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          482..509
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          614..645
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..858
                     /gene="LOC107928609"
                     /coded_by="XM_016859865.2:85..2661"
                     /db_xref="GeneID:107928609"
ORIGIN      
        1 mtaskaktls slfktavrna tkessslpsg dkplkqfvss ldtssypsps sasfrirspq
       61 ptkkpandgs lhswllqpas tsensiggft delhsilctg hpesskdiee mmdngssler
      121 vlnipwlsnv snnnislrrk elsrerkqkw vfkktqsgrf nrlikmcgdk lgtkatievf
      181 dklgrdtglk eynaliavcl ekartsnded dalehmseaf ktlkkmrerg fqveegtygp
      241 flmyfidmgm veeffffcgp ikegnpssvt rlgyyemllw igvnneekiq elcncivaad
      301 eeddfklken yllalcesgr kdimqllevi ditrissvnv vanifeslgr lsfdsfaekf
      361 lwtlknndyk madisrlifs yvsaipnlav edlflkfksl hmkfeitpss asyeklityc
      421 cdlhkvhfal divhqmceeg lslsiemlhs ilhaseenye ynlvrriysl igchnvkpts
      481 etfrsminls vkmkdfngay amlddlkkln isptstiynt ilagyfresn isgammvlkq
      541 mesedvkpds htysylianc nceeditkyc eamkaagiqv tkhifmalin aytacgqiek
      601 akqvvldkgi pvnslneikg alasalacsg mmpdalniyk eikqnggtle pkpvislieh
      661 ftsegdvnil lqlleelhdp dywfdgccra vvhcvtkkhl rlaldllkql kdefhkddla
      721 ldvvfdevfs viaerqpndl qiglallqam kdelgltpsr ksldfllasc vsakdlqssl
      781 liwreyqaag lrcniltflr myqallasgd pksaktlltk iptedphvrc iikacqmtyv
      841 qstsskmkkq kvqkknkt
//
LOCUS       XP_040942909             757 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942909
VERSION     XP_040942909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086975.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..757
                     /product="pentatricopeptide repeat-containing protein
                     At4g04790, mitochondrial isoform X2"
                     /calculated_mol_wt=85384
     Region          160..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          192..229
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          412..439
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <478..>677
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          482..509
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          614..645
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..757
                     /gene="LOC107928609"
                     /coded_by="XM_041086975.1:75..2348"
                     /db_xref="GeneID:107928609"
ORIGIN      
        1 mtaskaktls slfktavrna tkessslpsg dkplkqfvss ldtssypsps sasfrirspq
       61 ptkkpandgs lhswllqpas tsensiggft delhsilctg hpesskdiee mmdngssler
      121 vlnipwlsnv snnnislrrk elsrerkqkw vfkktqsgrf nrlikmcgdk lgtkatievf
      181 dklgrdtglk eynaliavcl ekartsnded dalehmseaf ktlkkmrerg fqveegtygp
      241 flmyfidmgm veeffffcgp ikegnpssvt rlgyyemllw igvnneekiq elcncivaad
      301 eeddfklken yllalcesgr kdimqllevi ditrissvnv vanifeslgr lsfdsfaekf
      361 lwtlknndyk madisrlifs yvsaipnlav edlflkfksl hmkfeitpss asyeklityc
      421 cdlhkvhfal divhqmceeg lslsiemlhs ilhaseenye ynlvrriysl igchnvkpts
      481 etfrsminls vkmkdfngay amlddlkkln isptstiynt ilagyfresn isgammvlkq
      541 mesedvkpds htysylianc nceeditkyc eamkaagiqv tkhifmalin aytacgqiek
      601 akqvvldkgi pvnslneikg alasalacsg mmpdalniyk eikqnggtle pkpvislieh
      661 ftsegdvnil lqlleelhdp dywfdgccra vvhcvtkkhl rlaldllkql kdefhkddla
      721 ldvvfdecnc reaakrftdw pgfasshegr irpysfs
//
LOCUS       XP_016715359             230 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NDR1 [Gossypium hirsutum].
ACCESSION   XP_016715359
VERSION     XP_016715359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="protein NDR1"
                     /calculated_mol_wt=25409
     CDS             1..230
                     /gene="LOC107928615"
                     /coded_by="XM_016859870.2:301..993"
                     /db_xref="GeneID:107928615"
ORIGIN      
        1 mpfakpslgk ekkkkednsq spenmsdsdg gccrcccsfi ftlgltalfm wlslrtsnpk
       61 csienfylps ldttlknpnd ttlnltlkle ntnkdkgiky davkvavsds qnrnhvvanv
      121 svpgfyqghk kkakkngtgt anltvasqvt snngmrvfwv dlstsvkfki mfwytkkhki
      181 rvganmtvna tgvkverkgi klksmaprmg sfcvvmgsll nflvfsllhf
//
LOCUS       XP_040942910             362 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin 2-beta-dioxygenase 8 [Gossypium hirsutum].
ACCESSION   XP_040942910
VERSION     XP_040942910.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086976.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..362
                     /product="gibberellin 2-beta-dioxygenase 8"
                     /calculated_mol_wt=41436
     Region          37..361
                     /region_name="PLN02984"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:215534"
     CDS             1..362
                     /gene="LOC107928634"
                     /coded_by="XM_041086976.1:39..1127"
                     /db_xref="GeneID:107928634"
ORIGIN      
        1 mslhcqksak gdkvnthkfk adihqdreds eamaieppff ekykailqss aneeekpstv
       61 egfeelelpl idlshlnlgp lerqeciekm gqaaiewgff qivnhavpde llnrlkqeqi
      121 kvfqqpfdkk sennflnlsv qsyrwgnpla tslrnlswse alhislkdis kmdeynklrs
      181 tieeyaekan flaqrlaeyl aqnlgikany fqencspsss slrmnryppc pypsmmfgii
      241 phtdtdflti vsqdqvgglq lkrngrwvsv kpnpkalvvn igdfyqalsn gvyksithrv
      301 ianqeterys aayfycptye tviescskps lykkfsfkey reqiqkdvka tgdkvglsrf
      361 ll
//
LOCUS       XP_016715385             381 aa            linear   PLN 06-AUG-2024
DEFINITION  polyubiquitin [Gossypium hirsutum].
ACCESSION   XP_016715385
VERSION     XP_016715385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859896.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="polyubiquitin"
                     /calculated_mol_wt=42582
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          77..152
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(82..85,87,110..113,116,118,120,122..125,144..152)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(84..88,107..111,116,118,120,122..125,144,146..152)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          153..228
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(158..161,163,186..189,192,194,196,198..201,220..228)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(160..164,183..187,192,194,196,198..201,220,222..228)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          229..304
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(234..237,239,262..265,268,270,272,274..277,296..304)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(236..240,259..263,268,270,272,274..277,296,298..304)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          305..380
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(310..313,315,338..341,344,346,348,350..353,372..380)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(312..316,335..339,344,346,348,350..353,372,374..380)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     CDS             1..381
                     /gene="LOC107928641"
                     /coded_by="XM_016859896.2:196..1341"
                     /db_xref="GeneID:107928641"
ORIGIN      
        1 mqifvktltg ktitlevess dtidnvkaki qdkegippdq qrlifagkql edgrtladyn
       61 iqkestlhlv lrlrggmqif vktltgktit levessdtid nvkakiqdke gippdqqrli
      121 fagkqledgr tladyniqke stlhlvlrlr ggmqifvktl tgktitleve ssdtidnika
      181 kiqdkegipp dqqrlifagk qledgrtlad yniqkestlh lvlrlrggmq ifvktltgkt
      241 itlevessdt idnvkakiqd kegippdqqr lifagkqled grtladyniq kestlhlvlr
      301 lrggmqifvk tltgktitle vessdtidnv kakiqdkegi ppdqqrlifa gkqledgrtl
      361 adyniqkest lhlvlrlrgg f
//
LOCUS       XP_016715357             113 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translation factor SUI1 homolog 2 [Gossypium hirsutum].
ACCESSION   XP_016715357
VERSION     XP_016715357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859868.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="protein translation factor SUI1 homolog 2"
                     /calculated_mol_wt=12478
     Region          5..113
                     /region_name="SUI1_MOF2"
                     /note="translation initiation factor SUI1, eukaryotic;
                     TIGR01160"
                     /db_xref="CDD:130228"
     Site            order(38,41..42,44,61,64..66,68..70,72,86,89)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            88..89
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..113
                     /gene="LOC107928612"
                     /coded_by="XM_016859868.2:439..780"
                     /db_xref="GeneID:107928612"
ORIGIN      
        1 msdldiqipt afdpfadana edsgagakey vhiriqqrng rkslttvqgl kkefsynkil
       61 kdlkkefccn gtvvqdpelg qviqlqgdqr knvstflvqa givkkdniki hgf
//
LOCUS       XP_016715381              77 aa            linear   PLN 06-AUG-2024
DEFINITION  MYB-like transcription factor ETC1 [Gossypium hirsutum].
ACCESSION   XP_016715381
VERSION     XP_016715381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859892.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..77
                     /product="MYB-like transcription factor ETC1"
                     /calculated_mol_wt=8755
     Region          <32..>71
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..77
                     /gene="LOC107928636"
                     /coded_by="XM_016859892.2:100..333"
                     /db_xref="GeneID:107928636"
ORIGIN      
        1 maeseyssse nasmdsdsie dqskqdlelq fsedeetlvi rmfnlvgerw gliagripgr
       61 taeeiekywn trystsq
//
LOCUS       XP_016715358             299 aa            linear   PLN 06-AUG-2024
DEFINITION  DDRGK domain-containing protein 1 [Gossypium hirsutum].
ACCESSION   XP_016715358
VERSION     XP_016715358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..299
                     /product="DDRGK domain-containing protein 1"
                     /calculated_mol_wt=34158
     Region          104..279
                     /region_name="DDRGK"
                     /note="DDRGK domain; pfam09756"
                     /db_xref="CDD:370664"
     CDS             1..299
                     /gene="LOC107928614"
                     /coded_by="XM_016859869.2:170..1069"
                     /db_xref="GeneID:107928614"
ORIGIN      
        1 meeilalfls mflvlalvpl yiwkrrqdtr ptvehveerq aprrenvvrg gagarsrmrr
       61 rptaggasss saataeetad gseeeeegdg yyeakaskkk ekkrqerdaq rraeeaares
      121 rqtkqdryae mrrkkdeere aeerrleeea qarkakeeea aalefekwkg afsvdaegtt
      181 enefqdgsqd llsnfveyik nhkcipledl agefklrtqe cinritsles mgrlsgvmdd
      241 rgkyiyisme emkavadyik rqgrvsishl asksnqfidl epkvqfteei staeeitva
//
LOCUS       XP_040942911             299 aa            linear   PLN 06-AUG-2024
DEFINITION  DDRGK domain-containing protein 1 [Gossypium hirsutum].
ACCESSION   XP_040942911
VERSION     XP_040942911.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086977.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..299
                     /product="DDRGK domain-containing protein 1"
                     /calculated_mol_wt=34158
     Region          104..279
                     /region_name="DDRGK"
                     /note="DDRGK domain; pfam09756"
                     /db_xref="CDD:370664"
     CDS             1..299
                     /gene="LOC107928614"
                     /coded_by="XM_041086977.1:250..1149"
                     /db_xref="GeneID:107928614"
ORIGIN      
        1 meeilalfls mflvlalvpl yiwkrrqdtr ptvehveerq aprrenvvrg gagarsrmrr
       61 rptaggasss saataeetad gseeeeegdg yyeakaskkk ekkrqerdaq rraeeaares
      121 rqtkqdryae mrrkkdeere aeerrleeea qarkakeeea aalefekwkg afsvdaegtt
      181 enefqdgsqd llsnfveyik nhkcipledl agefklrtqe cinritsles mgrlsgvmdd
      241 rgkyiyisme emkavadyik rqgrvsishl asksnqfidl epkvqfteei staeeitva
//
LOCUS       XP_016715363             113 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translation factor SUI1 homolog 2 [Gossypium hirsutum].
ACCESSION   XP_016715363
VERSION     XP_016715363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859874.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="protein translation factor SUI1 homolog 2"
                     /calculated_mol_wt=12478
     Region          5..113
                     /region_name="SUI1_MOF2"
                     /note="translation initiation factor SUI1, eukaryotic;
                     TIGR01160"
                     /db_xref="CDD:130228"
     Site            order(38,41..42,44,61,64..66,68..70,72,86,89)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            88..89
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..113
                     /gene="LOC107928619"
                     /coded_by="XM_016859874.2:242..583"
                     /db_xref="GeneID:107928619"
ORIGIN      
        1 msdldvqipt afdpfadana edsgagakdy vhirvqqrng rkslttvqgl kkefsynkil
       61 kdlkkefccn gtvvqdpelg qviqlqgdqr knvstflvqa givrkeniki hgf
//
LOCUS       XP_016715388             667 aa            linear   PLN 06-AUG-2024
DEFINITION  COBRA-like protein 10 [Gossypium hirsutum].
ACCESSION   XP_016715388
VERSION     XP_016715388.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715388.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..667
                     /product="COBRA-like protein 10"
                     /calculated_mol_wt=74424
     Region          239..418
                     /region_name="COBRA"
                     /note="COBRA-like protein; pfam04833"
                     /db_xref="CDD:461450"
     CDS             1..667
                     /gene="LOC107928644"
                     /coded_by="XM_016859899.2:517..2520"
                     /db_xref="GeneID:107928644"
ORIGIN      
        1 mevpglklic laflfihtri lvcygapdda vddytdetpa kppppemdnc ngvflsyaft
       61 srtkalpllk nvsaqpwtfn amatvvnsgt eevkgwkmyi gfqhkeilvs atnavlvdgd
      121 vdfpaavgng ttlagypkad lktsidtagd fnqiavqvel kgsmfglgek atpmpktisl
      181 rndgwrcptp tkyktymhac ckrdpkfkvn snrkskfaar qngdltftyd vvksyegsye
      241 aqvtmdnssp igrldrwnlt wewmrgefiy smkgaytprf disdcvygla gryltgfdft
      301 nvmncekkpt itdlpltkan dtqigkipyc cknasllppq mdpsraraif qlrvyklppd
      361 tpptilyppq rwnitgvina ryhcgppirv dpsefpnpkg fdakvyaias wqvvcnmtra
      421 ekrktrccvs fsayysdgai pcstcacgcd nidtdkcnpd kpamhlppda lllpsenrta
      481 ktkafaklkk kgiprklpcp dncgvsinwh intdhkagws armtlfnwqe apfvdwfvav
      541 emkkaypdyd nvfsfngtkk lkgikntiff qslkdlnylv emkngskpsd pkvpgkqqsv
      601 isfikkktpn ikirkgdgfp skvyfngeec alprsfpssg hrsplsiasf ilisitttfl
      661 litnrfi
//
LOCUS       XP_040942912             473 aa            linear   PLN 06-AUG-2024
DEFINITION  rab GTPase-activating protein 22 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942912
VERSION     XP_040942912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086978.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..473
                     /product="rab GTPase-activating protein 22 isoform X1"
                     /calculated_mol_wt=54108
     Region          60..371
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..473
                     /gene="LOC107928646"
                     /coded_by="XM_041086978.1:420..1841"
                     /db_xref="GeneID:107928646"
ORIGIN      
        1 mrgapsepad syyevrpdst dvpatrfrik pgktlsvrkw laafssdgql digktlnrih
       61 rggihpairg evwefllgcy hpmstfderk qmrqnrraqy vrlknecskm fpvvgsgkyi
      121 tapvitedgq pirnpvvdle tnldananrt emaneltsng pldmkvvqwm htlhqigldv
      181 krtdrtllfy dkpenlsklw dilsvyawid idvgycqgms dlcspmiill eneadafwcf
      241 erlmrrlrgn fqctetfvgv qtqlsnlatv tqvidpklhq hlgtnrslyl pfssvmdcaf
      301 fvhlrrlifl flyfgstetl gggnylfafr mlmvlfrref sfcdslylwe mmwaleydpd
      361 lfslyeelel nmekaegpkg kskptrkygk yerenmkiks vdaplpisvf lvasvlkdks
      421 svllhqargl ddvvkilndm tgnldakkac igalklhkky vkakthrnsk smg
//
LOCUS       XP_040942913             438 aa            linear   PLN 06-AUG-2024
DEFINITION  rab GTPase-activating protein 22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942913
VERSION     XP_040942913.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086979.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..438
                     /product="rab GTPase-activating protein 22 isoform X2"
                     /calculated_mol_wt=50006
     Region          60..336
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..438
                     /gene="LOC107928646"
                     /coded_by="XM_041086979.1:418..1734"
                     /db_xref="GeneID:107928646"
ORIGIN      
        1 mrgapsepad syyevrpdst dvpatrfrik pgktlsvrkw laafssdgql digktlnrih
       61 rggihpairg evwefllgcy hpmstfderk qmrqnrraqy vrlknecskm fpvvgsgkyi
      121 tapvitedgq pirnpvvdle tnldananrt emaneltsng pldmkvvqwm htlhqigldv
      181 krtdrtllfy dkpenlsklw dilsvyawid idvgycqgms dlcspmiill eneadafwcf
      241 erlmrrlrgn fqctetfvgv qtqlsnlatv tqvidpklhq hletlgggny lfafrmlmvl
      301 frrefsfcds lylwemmwal eydpdlfsly eelelnmeka egpkgkskpt rkygkyeren
      361 mkiksvdapl pisvflvasv lkdkssvllh qarglddvvk ilndmtgnld akkacigalk
      421 lhkkyvkakt hrnsksmg
//
LOCUS       XP_016715368             228 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/FBD/LRR-repeat protein At1g78750 [Gossypium hirsutum].
ACCESSION   XP_016715368
VERSION     XP_016715368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859879.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="F-box/FBD/LRR-repeat protein At1g78750"
                     /calculated_mol_wt=25642
     Region          57..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          83..106
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          107..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          156..228
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..228
                     /gene="LOC107928625"
                     /coded_by="XM_016859879.2:734..1420"
                     /db_xref="GeneID:107928625"
ORIGIN      
        1 mgnmsnanis hhllkrlttl hsythyfmid apnlahfksi shvatgyslk nlesivsadi
       61 hfvieynylq adatalfrgi csvrslvlsa tslmllscep lpvfanlmel dmryyyglid
      121 wsssdkglet llassqlekl yfiqevlcsl pqkvpcclly klktikitnf tdekdcigka
      181 kniltnggal qkltirtgly iseeeklety qvllasprks kqcrilfi
//
LOCUS       XP_016715369             209 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein 9-3 [Gossypium hirsutum].
ACCESSION   XP_016715369
VERSION     XP_016715369.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859880.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715369.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..209
                     /product="germin-like protein 9-3"
                     /calculated_mol_wt=22366
     Region          26..205
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(28,32..33,48..52,54..55,71,76,83..86,106,108,110,
                     112,118,120,122,128,130,132,135..139,141,144,160,162,164)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(68,87,89,97,100,102,107,146,159,163,170)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..209
                     /gene="LOC107928626"
                     /coded_by="XM_016859880.2:151..780"
                     /db_xref="GeneID:107928626"
ORIGIN      
        1 maltvkqrff ltilvlafpl saisgdpdii sdfvvpmevn ntlldgnfft ytgmrplins
       61 dpptnftvtk atmgefpaln gqsvsyavlq ypagsvnpph thpratellf ltygvlevgf
      121 vdttnklftq rlqagdifaf pkglvhyqfn caendfavav safgsaaagt vsvpstvlat
      181 giddeilaks fktdvytiqk lkagfapka
//
LOCUS       XP_016715383             209 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein 9-3 [Gossypium hirsutum].
ACCESSION   XP_016715383
VERSION     XP_016715383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859894.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..209
                     /product="germin-like protein 9-3"
                     /calculated_mol_wt=22131
     Region          26..205
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(28,32..33,48..52,54..55,71,76,83..86,106,108,110,
                     112,118,120,122,128,130,132,135..139,141,144,160,162,164)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(68,87,89,97,100,102,107,146,159,163,170)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..209
                     /gene="LOC107928639"
                     /coded_by="XM_016859894.1:20..649"
                     /db_xref="GeneID:107928639"
ORIGIN      
        1 maltvkqrff lailvlafpl saisgdpdil sdfvvpigvn atllggnfft ytgmrplins
       61 dpptnftvtk atmaefpaln gqsvsyavle ypagsvnpph thpraaellf ltygilevgf
      121 vdttsklftq ilqagdifvf pkglvhyqfn caesdfavav safgsaaagt vsvpstvfat
      181 niddeilaks fktdvqtiqk lkagfapka
//
LOCUS       XP_016715393             353 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: electron transfer flavoprotein subunit alpha,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016715393
VERSION     XP_016715393.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859904.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715393.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="LOW QUALITY PROTEIN: electron transfer
                     flavoprotein subunit alpha, mitochondrial"
                     /calculated_mol_wt=37041
     Region          10..353
                     /region_name="PLN00022"
                     /note="electron transfer flavoprotein subunit alpha;
                     Provisional"
                     /db_xref="CDD:215032"
     CDS             1..353
                     /gene="LOC107928649"
                     /coded_by="XM_016859904.2:196..1257"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107928649"
ORIGIN      
        1 masrlllqnl skrhllrstf afrsastlvl aehegglika qslsavvaan slsqdnpvsl
       61 llagsgsslh qaaekaatch psisqvlvad sekfayplae pwakliqlvq lkgdyshvit
      121 tsdsfgknil praaalldvs pvtdvvding prqfirpiya gnalctvryt ganpcmltvr
      181 stsfpvppis vdsksggasi sevdlstlde dsvgksrfmk lssqdtgrpd lgsakivvtg
      241 gralksaenf kmieklaekl gaavgatraa vdagfvpndl qvgqtgkxva pelymafgvs
      301 gaiqhlagmk dskiivavnk dsdapifqva dyglvgdlfe vipelleklp ekk
//
LOCUS       XP_016715382             176 aa            linear   PLN 06-AUG-2024
DEFINITION  vascular-related unknown protein 4 [Gossypium hirsutum].
ACCESSION   XP_016715382
VERSION     XP_016715382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859893.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..176
                     /product="vascular-related unknown protein 4"
                     /calculated_mol_wt=19204
     CDS             1..176
                     /gene="LOC107928637"
                     /coded_by="XM_016859893.2:153..683"
                     /db_xref="GeneID:107928637"
ORIGIN      
        1 mensmnsmfr psspvgdetp eesswtmyfq dfsndiqmdg nssscycssy inyqtsslls
       61 daacsaagph aldhksskkn rlsfkkrknn gspaagfvdd dledtasspv nspkicntnm
      121 enqfdknlkv kdamdkpqkn kgsgssgqtd erndetqlkk kglclvplsm vvqylg
//
LOCUS       XP_040942915             169 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HDG2-like [Gossypium hirsutum].
ACCESSION   XP_040942915
VERSION     XP_040942915.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086981.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="homeobox-leucine zipper protein HDG2-like"
                     /calculated_mol_wt=19025
     Region          19..>167
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..169
                     /gene="LOC121213823"
                     /coded_by="XM_041086981.1:44..553"
                     /db_xref="GeneID:121213823"
ORIGIN      
        1 mnrasdllma vsigadlnkn kiieqaveam eelfklaimg eplwqhngng gmetlngfqy
       61 lrefgsfdat meqimrmvev gepqcflsyd cncnfdqdvp ssfsklnfep lnietsreta
      121 fvemnpmniv qllmdtkqwg ttfysivsrt tllgvilenv dgsyngffk
//
LOCUS       XP_040942916             221 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942916
VERSION     XP_040942916.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086982.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24536
     Region          87..>204
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..221
                     /gene="LOC121213824"
                     /coded_by="XM_041086982.1:119..784"
                     /db_xref="GeneID:121213824"
ORIGIN      
        1 mvgleeapgy eievnynhfg anpppemnpv edyfaqsnen sgspllynpp spqnspgses
       61 stnakldhmn rasdllmavs igadlnknki ieqaveamee lfklaimgep lwqhngnggm
      121 etlngfqylr efgsfdatme qimrmvevge pqcflsydcn cnfdqdvpss fsklnfepln
      181 ietsretafv emnpmnivql lmdtvgilfp lvplhyvsll i
//
LOCUS       XP_016727359             570 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-5 complex subunit zeta-1 [Gossypium hirsutum].
ACCESSION   XP_016727359
VERSION     XP_016727359.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727359.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..570
                     /product="AP-5 complex subunit zeta-1"
                     /calculated_mol_wt=63375
     Region          29..145
                     /region_name="SPG48"
                     /note="AP-5 complex subunit, vesicle trafficking;
                     pfam14764"
                     /db_xref="CDD:464303"
     CDS             1..570
                     /gene="LOC107938647"
                     /coded_by="XM_016871870.2:107..1819"
                     /db_xref="GeneID:107938647"
ORIGIN      
        1 msdqerdwdf ylrtvsnsar dssfandpas dpsllhavkk lcdfcrqeek ssedlvarvy
       61 phinklfqrs taslsqptsp ngilllvilq ffldfgevvl hdadpslrtf frsclsrefa
      121 dpvvaaatld flnvnknkll fsfpnllpqf fplllkliaw ngeklekafl kvfpglvspg
      181 sflplfpslv dlpilvvale kverssgsli gssiasiqks aapemllalm deaytgstig
      241 dgggdsesee sstidvadpv flellkdend glaerhwtsp gvaavlqaat nspqsdrlkq
      301 ilnitprlld myftialrda nnslicalip ilmarnstlf pdknymyevr rrllefmlas
      361 fqrspdfial lkkpivdrlg eaydspekte lalqlcwavg ehgggggshk daarelfesl
      421 elllyenlss srlglrqesi nsdsrnfrks sqsrllcfvi taiaklatyh rellprarva
      481 lgkvarsris dsrvwrrard ylglmddpai clsvlgpsrp shgyphnpgt vnwndggtkm
      541 iahipfyilg eqegppfhdf sfpdilprrr
//
LOCUS       XP_016727347             421 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At4g22280 [Gossypium hirsutum].
ACCESSION   XP_016727347
VERSION     XP_016727347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="F-box protein At4g22280"
                     /calculated_mol_wt=47585
     Region          13..48
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(16,20,23..24,27..28,32,34..35,39..41,43)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          140..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          161..185
                     /region_name="LRR_2"
                     /note="Leucine Rich Repeat; pfam07723"
                     /db_xref="CDD:336782"
     Region          162..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          188..207
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          208..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          252..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          279..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          349..420
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..421
                     /gene="LOC107938630"
                     /coded_by="XM_016871858.2:343..1608"
                     /db_xref="GeneID:107938630"
ORIGIN      
        1 matqvkmenv drisnlpdsi lgyilsflst keavatslls skwrylfalv snldfeldes
       61 sqmlkistik sfmcfvdrvl ffhntsnina frlrcgkrvd sdrvygwica aiwrgvkhlg
      121 lsisldnftl pgvlftcttl itlklktnlv lnvpkdvclp nlkilhlksi mfpnddsves
      181 lvsscislve liicncstkk cnishnslkl leiirsvlyg slvidtpala yfnytysvar
      241 eyslknlqsl iradiafldi rfdshqtkat affegisnvn ilvlsspslk llkcceplpi
      301 fpkllhlnly cdyhnfergv anlltdsgrl qslffyqeal tnlpervphc ilyqlkviei
      361 sgfmtnkdci gkakyflena tvlmkliirt vpflseeqks riyqqlmasp skskqccilv
      421 v
//
LOCUS       XP_016727357             390 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate/phosphate translocator 1, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016727357
VERSION     XP_016727357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871868.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="glucose-6-phosphate/phosphate translocator 1,
                     chloroplastic"
                     /calculated_mol_wt=42730
     Region          98..386
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; pfam03151"
                     /db_xref="CDD:308657"
     CDS             1..390
                     /gene="LOC107938644"
                     /coded_by="XM_016871868.2:494..1666"
                     /db_xref="GeneID:107938644"
ORIGIN      
        1 msftikqsal atcidvsnsl vykrspsirr hpfspvlnlq nitkrtnvlv skplhissve
       61 sigkekkpvi qcnayeadks epieaaeqvk seaakrvkig iyfatwwgln vvfniynkkv
      121 lnaypypwlt stlslacgsl mmliswatri aetpktdfef wktlfpvava htighvaatv
      181 smskvavsft hiiksgepaf svlvsrfllg esfplsvyls lipiiggcal saltelnfnm
      241 tgfmgamisn lafvlrnifs kkgmkgksvs gmnyyaclsl lslviltpfa iavegpqmwa
      301 agwetalsqi gpqfiwwvaa qsifyhlynq vsymsldeis pltfsvgntm krisvivssi
      361 iifhtpvqpi nalgaaiail gtflysqaka
//
LOCUS       XP_016727341             393 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727341
VERSION     XP_016727341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43659
     Region          19..>116
                     /region_name="RMP1_RBD"
                     /note="RNA binding domain of Saccharomyces cerevisiae
                     RNase MRP protein 1 (RMP1) and similar proteins; cl20703"
                     /db_xref="CDD:473480"
     Site            order(32..33,35..36,39,45,48..49,51..52,56,106..107,110)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:439340"
     CDS             1..393
                     /gene="LOC107938624"
                     /coded_by="XM_016871852.2:239..1420"
                     /db_xref="GeneID:107938624"
ORIGIN      
        1 mnseidstke eklksllgql evecgiferi vyknknqhrr ssyfqyllkv rrdlrllksa
       61 nleelisscf lvitgirpkq kvqlleslkr rkndvgkpnf mdrllgaarl lsqivepmlr
      121 aateistlva rsffmgfslt vlallarlrv lvqqilldmv pvfntassls qkkqsikith
      181 qgievyreff pkkedfvtle cvwnmdkfvl vertnrceie mqergndgev saggnavqye
      241 tiesflgdde ptaekadaet spcmkvsitg itidhdddkm qvenvaekvd gtvfvensel
      301 knvsqahlva dtstsaisds fevmsnarkv afvsvkrpas spanptdlpl ragpstmnpt
      361 dlpskgsgss ggdktdafys lltlgnlnns lfe
//
LOCUS       XP_016727342              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_016727342
VERSION     XP_016727342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_016871853.2:183..479"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_016727343              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_016727343
VERSION     XP_016727343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871854.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_016871854.2:242..538"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_040942917              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_040942917
VERSION     XP_040942917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086983.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_041086983.1:376..672"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_040942918              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_040942918
VERSION     XP_040942918.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086984.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_041086984.1:384..680"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_040942919              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_040942919
VERSION     XP_040942919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086985.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_041086985.1:435..731"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_016727346              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_016727346
VERSION     XP_016727346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_016871857.2:443..739"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_016727344              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_016727344
VERSION     XP_016727344.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871855.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_016871855.2:191..487"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_040942920              98 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM8 [Gossypium hirsutum].
ACCESSION   XP_040942920
VERSION     XP_040942920.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086986.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="sm-like protein LSM8"
                     /calculated_mol_wt=10521
     Region          5..94
                     /region_name="LSm8"
                     /note="Like-Sm protein 8; cd01727"
                     /db_xref="CDD:212474"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,61..73)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212474"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212474"
     Site            order(33,35,65)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212474"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212474"
     CDS             1..98
                     /gene="LOC107938625"
                     /coded_by="XM_041086986.1:250..546"
                     /db_xref="GeneID:107938625"
ORIGIN      
        1 mstgpglesl vdqtisvitn dgrnivgvlk gfdqatniil deshervyst kegvqqlvlg
       61 lyiirgdnis vvgeldeeld saldlsnlra hplkpvih
//
LOCUS       XP_040942921             337 aa            linear   PLN 06-AUG-2024
DEFINITION  chloroplastic lipocalin [Gossypium hirsutum].
ACCESSION   XP_040942921
VERSION     XP_040942921.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086987.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..337
                     /product="chloroplastic lipocalin"
                     /calculated_mol_wt=37368
     Region          109..249
                     /region_name="lipocalin_CHL"
                     /note="chloroplastic lipocalin(CHL) similar to Arabidopsis
                     CHL; cd19851"
                     /db_xref="CDD:381251"
     Site            order(122,126,149,151,160,162,164,178,180,182,207,209,220,
                     222,224,233,235,237,243,245,247)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381251"
     CDS             1..337
                     /gene="LOC107938645"
                     /coded_by="XM_041086987.1:277..1290"
                     /db_xref="GeneID:107938645"
ORIGIN      
        1 mvnailyhqt splllfqccs sshpphiprg lpgkltlncs iksppnkvia shivsglasl
       61 iflsqtnqvl aadlshdpsi cqlasatdne ltlpleedsg egngklmmmr gmtaknfdpv
      121 rysgrwfeva slkrgfagqg qedchctqgv ytfdmktpai qvdtfcvhgg pdgyitgirg
      181 kvqclsdedl vknetdlekq emikekcylr fptlpfipke pynviatdyd nfslvsgakd
      241 tsfiqiysrt pnpghefiek yksylsnygy dpskikdtpq dcqvmsnsql aammsmpgmq
      301 qaltnefpdl elkapvafnp ftsvfdtlkk llelyfk
//
LOCUS       XP_016727358             172 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LHCP TRANSLOCATION DEFECT [Gossypium hirsutum].
ACCESSION   XP_016727358
VERSION     XP_016727358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="protein LHCP TRANSLOCATION DEFECT"
                     /calculated_mol_wt=18859
     Region          <94..164
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          119..145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..172
                     /gene="LOC107938646"
                     /coded_by="XM_016871869.2:220..738"
                     /db_xref="GeneID:107938646"
ORIGIN      
        1 masipctfqi pftskpvnsl pslpklsskf lgsqktlsws rpsrigpsng srtqcwfkfg
       61 kngvdaegag iygsqgrddf drddveqyfn ymgmlavegs ydkmeallnq nihpvdillm
      121 laasegdkpk ieellragak ydvkdadgrt aleravneei kdfilgfsvq ka
//
LOCUS       XP_040942922             436 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At4g22280 [Gossypium hirsutum].
ACCESSION   XP_040942922
VERSION     XP_040942922.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086988.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..436
                     /product="F-box protein At4g22280"
                     /calculated_mol_wt=49908
     Region          13..48
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(16,20,23..24,27..28,32,34..35,39..41,43)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          146..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          169..193
                     /region_name="LRR_2"
                     /note="Leucine Rich Repeat; pfam07723"
                     /db_xref="CDD:336782"
     Region          170..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          196..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          219..241
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          288..312
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          313..343
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          364..430
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..436
                     /gene="LOC107938635"
                     /coded_by="XM_041086988.1:80..1390"
                     /db_xref="GeneID:107938635"
ORIGIN      
        1 makqvkmenv drisglhdsi lihilsflya kqvirtsils trwrylfall pnlhfdfegd
       61 lwrrgytsyr hidiysygcl vdkmlithnm tnidklrlkc ramidpdrfh awisaavhrg
      121 vkhldlnisp gkfttrpavl ftcrtlvtlk lcmefdfvld vpkgahfpnl ktiyleevnf
      181 snddsvksll sgctsledlv iekflmsnis nfnishhllk rltllytyqs dygwitidap
      241 nlvyleydde lvagyslqnl qslvkadidi snslevdgst ffrgicnvrs lilsdtslel
      301 llsceplpvf anlvklkihc sndlrpyygq wekgletlls slpeleklef nqealislpe
      361 kvpscllskl ksikisgitd erdcigkaky flkngralek ltirtslrys eerkskiskv
      421 lsaspreskh lcifif
//
LOCUS       XP_040942923             381 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59200 [Gossypium hirsutum].
ACCESSION   XP_040942923
VERSION     XP_040942923.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086989.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="F-box/LRR-repeat protein At3g59200"
                     /calculated_mol_wt=43527
     Region          13..47
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(16,20,23..24,27..28,32,34..35,39..41,43)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          145..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          167..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          185..207
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          208..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          254..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          279..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          304..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..381
                     /gene="LOC107938636"
                     /coded_by="XM_041086989.1:98..1243"
                     /db_xref="GeneID:107938636"
ORIGIN      
        1 maeqvkmekv drisdlhdsi lthvpsflst keaiktsvls trwrylfdll pnidfdleed
       61 lcrkniksys tdvienymcs vdrmllfcnt tnvskfgfkc wikmigsnrf nrwisaavdr
      121 gvkhldlsts vlpsstlpil tcktlvslkl gkyfvlnvpk dvllpnlkil hlhsvkrlls
      181 gcphledmvt rkcdlgnirn fhishhllkt ltirytynsy qcwlwinapn ltsleyydrl
      241 vagysmenlq sltkavidis acktlradat kifkgicdvp slvlsdtslq lllrceplpv
      301 fenlikldlp chlrfrcsna fqkgletlls slpalknlsf irkfsalfqr kcllvccins
      361 rpsklqtlqm kkivlerpsi s
//
LOCUS       XP_040942924             182 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942924
VERSION     XP_040942924.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086990.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19710
     CDS             1..182
                     /gene="LOC121203521"
                     /coded_by="XM_041086990.1:1..549"
                     /db_xref="GeneID:121203521"
ORIGIN      
        1 mvqkleaikg gggsikvgtk gtisslmtre ldsvkpapkt pvsfrhksqt iptsvacgsp
       61 tpkrlqlrks ldgastsgnd nnyisykhhq tsqktkslsk sthqipmlgf enialdrtps
      121 rqksdkkvsn ivevvdikcg kypdrawsnp vtnrlkklgf sklsqsisrp atcshqisgs
      181 yn
//
LOCUS       XP_016727339             163 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727339
VERSION     XP_016727339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871850.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17936
     CDS             1..163
                     /gene="LOC107938622"
                     /coded_by="XM_016871850.2:1..492"
                     /db_xref="GeneID:107938622"
ORIGIN      
        1 mrqrthleil gfkskqpmal sqrdfilntt stttipshlq psfinpikqs mqrsrtstks
       61 vpvemataia nppveigtrg tvgslvmqei eyfsqlelrs kdsskkphsn vgpvvptqkk
      121 kkrgssklip sicsmveisd nrslgisgls yrnlksdvnk lqv
//
LOCUS       XP_016727355            1136 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase I B, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016727355
VERSION     XP_016727355.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727355.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1136
                     /product="DNA polymerase I B, chloroplastic/mitochondrial"
                     /calculated_mol_wt=127163
     Region          385..619
                     /region_name="DNA_polA_I_Ecoli_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Escherichia coli
                     DNA polymerase I and similar bacterial family-A DNA
                     polymerases; cd06139"
                     /db_xref="CDD:176651"
     Site            order(389..392,395,458..459,461..463,499..500,528..529,
                     566,570)
                     /site_type="active"
                     /db_xref="CDD:176651"
     Site            order(389,391,463,566,570)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176651"
     Site            order(390..392,395,458..459,461..462,499..500,528..529,
                     566,570)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176651"
     Region          736..1134
                     /region_name="DNA_pol_A_plastid_like"
                     /note="DNA polymerase A type from plastids of higher
                     plants possibly involve in DNA replication or in the
                     repair of errors occurring during replication; cd08640"
                     /db_xref="CDD:176477"
     Site            order(809,813,816..817,842..844,846,848..851,883..884,912,
                     958,962,1046,1053,1084..1086)
                     /site_type="active"
                     /db_xref="CDD:176477"
     Site            order(809,813,816..817,842..844,846,848..851,970,
                     1045..1046,1049,1053,1084..1086)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176477"
     Site            order(883..884,886,912,958,962,1086)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176477"
     CDS             1..1136
                     /gene="LOC107938642"
                     /coded_by="XM_016871866.2:352..3762"
                     /db_xref="GeneID:107938642"
ORIGIN      
        1 matmgivsst sqtaatpfgr pfcpssswff rsrsrhffla ssralqrrem ctmqsvhcaf
       61 lsatmssssr hchhpkdmrl kvapseyarm vhpepdcyls dnkykgvrvd hktnensasf
      121 gksevtsfrv ndftftpkin gipnaahswe keayrvkknk emakesfkgr nfssddqqyl
      181 nlkltgslfk ttnkeesisg nngrsvtlfe shcpplptsn sqlsientva tdeingfkql
      241 nrtevsgngs lpglvfddhe dlgtsedgdf lfedhspqpp tsskqisrak svtsdrvngs
      301 kqlngssqga vsddiqdrgh mdpnvtrrdq anengvasse enlpvyrndi hkqlakiydq
      361 vlvvdnisva kevvlmlttk frhlvhacdt evsnidvkqe tpvdhgeitc fsiysgadad
      421 fgngksciwv dildgggrdl lkefvpffed qsikkvwhny sfdshvinny glevsgfyad
      481 tmhmarlwds srrtlggysl ealtgdrnvm qrstwrkeek eligktsmkt ifgkkkvkkd
      541 gsegkmitia pveelqreer klwicysald sistlrlyes lknklssmsw vfdgktipgk
      601 smyhfyeeyw rpfgeilvkm eregmlvdrm ylaqlekvak veqeiaanrf riwasrycdd
      661 akymnvgsdt qlrqllyggi lnskdpnvsl pdektfkipn vdkvieegkk aptkfrnikl
      721 csigvklpae iytatgwpsv sgvalkslag kvsaeydfte dtgdgdiddy petmtavdks
      781 aygtafaafe deekgreach aiaslcevcs idslisnfil plqgsnvsgk ggrvhcslni
      841 ntetgrlsar rpnlqnqpal ekdrykirqa fvaapgnslv vadygqlelr ilahladcks
      901 mldafkaggd fhsrtamnmy shiheaveeg qvllewhpqp geekppvpll kdafaserrk
      961 akmlnfsiay gktpvglakd wkvsveearn tvdlwykerq evlewqkqrk feaqkfgcvk
     1021 tllgrarrfp sfahctraqk ghieraaint pvqgsaadva mcamlqiskn erlkelgwrl
     1081 llqvhdevil egpsesaeia kaivvdcmsk pfggkntlkv elavdakcaq nwyaak
//
LOCUS       XP_016727356             912 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated protein TORTIFOLIA1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727356
VERSION     XP_016727356.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871867.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727356.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..912
                     /product="microtubule-associated protein TORTIFOLIA1
                     isoform X1"
                     /calculated_mol_wt=98842
     Region          42..66
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          75..103
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(95..96,99,102..103,136..137,143,147..148,151,
                     179..180,183,186..187,190,220..221,224,227..228,260..261,
                     264,267..268)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          112..269
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          119..151
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          161..191
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          202..228
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          240..269
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..912
                     /gene="LOC107938643"
                     /coded_by="XM_016871867.2:282..3020"
                     /db_xref="GeneID:107938643"
ORIGIN      
        1 msnsqaakst kpskastlpp psnppkpssl sshlamveqk qriltslskl sdrdtyqiav
       61 edletiiqsi sheslpmlln clfdssndpk pavkkeslrl lsvlcnchge laashlakiv
      121 ahvvkrlkda dsgvkdacrd sigalsgqyl kgenggtvvg lfvkplfeam geqnkgvqsg
      181 aatcmakmve casdpplaaf hklcprickl lnnqnflaka sllpvvasls qvgviapqsl
      241 epllqsihec lgstdwatrk aaadalsalv lhssnliadr asstitlled crfdrikpvr
      301 damtealqlw kkiagkgddg aadyqkassr dgdntqttes sqknglknpn aggkkndpsv
      361 kdssnnlspt sdsvskgkgg sipekavvil kkkapaltdk elnpeffqkl esrgsgdlpv
      421 evivprrycn ssnmkgeees ephdpdarrr lnclrnsqtd dihassnckd hnmergaadv
      481 gdkwpeekin gkylrtkafe adgridvnqr eqsgnhlgcs kvdgqsegsf isnkgnwlai
      541 qrqllqlerq qanlmnmlqd fmggshhsrv tlenrvrgle rivedmardl sissgrsgnf
      601 mpgfegssnr plgkyngfsd ysskfngqip ygerfaqsdr tapggrgrgp swrseisddw
      661 dfpafgasrn gqiasrrdpa ssgldgrspk sehesdqvgg rrawdkgpgp vrldegpsar
      721 svwqaskdea tleairvage dsgasrtgca peliaeavgd dnvgperdpi wtswsnamha
      781 lqvgdmdsay aevlstgddl lliklmdrsg pvvdqlsnel anealhailq flleqdlfdi
      841 clswiqqlve vvlengpdal gismelkkel llnlheaast ldppedwegv apdqlllqla
      901 stwgielqqf dk
//
LOCUS       XP_040942926             866 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated protein TORTIFOLIA1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942926
VERSION     XP_040942926.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086992.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..866
                     /product="microtubule-associated protein TORTIFOLIA1
                     isoform X2"
                     /calculated_mol_wt=94110
     Region          42..66
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          75..103
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(95..96,99,102..103,136..137,143,147..148,151,
                     179..180,183,186..187,190,220..221,224,227..228,260..261,
                     264,267..268)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          112..269
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          119..151
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          161..191
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          202..228
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          240..269
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..866
                     /gene="LOC107938643"
                     /coded_by="XM_041086992.1:282..2882"
                     /db_xref="GeneID:107938643"
ORIGIN      
        1 msnsqaakst kpskastlpp psnppkpssl sshlamveqk qriltslskl sdrdtyqiav
       61 edletiiqsi sheslpmlln clfdssndpk pavkkeslrl lsvlcnchge laashlakiv
      121 ahvvkrlkda dsgvkdacrd sigalsgqyl kgenggtvvg lfvkplfeam geqnkgvqsg
      181 aatcmakmve casdpplaaf hklcprickl lnnqnflaka sllpvvasls qvgviapqsl
      241 epllqsihec lgstdwatrk aaadalsalv lhssnliadr asstitlled crfdrikpvr
      301 damtealqlw kkiagkgddg aadyqkassr gkggsipeka vvilkkkapa ltdkelnpef
      361 fqklesrgsg dlpvevivpr rycnssnmkg eeesephdpd arrrlnclrn sqtddihass
      421 nckdhnmerg aadvgdkwpe ekingkylrt kafeadgrid vnqreqsgnh lgcskvdgqs
      481 egsfisnkgn wlaiqrqllq lerqqanlmn mlqdfmggsh hsrvtlenrv rglerivedm
      541 ardlsissgr sgnfmpgfeg ssnrplgkyn gfsdysskfn gqipygerfa qsdrtapggr
      601 grgpswrsei sddwdfpafg asrngqiasr rdpassgldg rspksehesd qvggrrawdk
      661 gpgpvrldeg psarsvwqas kdeatleair vagedsgasr tgcapeliae avgddnvgpe
      721 rdpiwtswsn amhalqvgdm dsayaevlst gddllliklm drsgpvvdql snelanealh
      781 ailqflleqd lfdiclswiq qlvevvleng pdalgismel kkelllnlhe aastldpped
      841 wegvapdqll lqlastwgie lqqfdk
//
LOCUS       XP_016721117             498 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 73C6 [Gossypium hirsutum].
ACCESSION   XP_016721117
VERSION     XP_016721117.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721117.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="UDP-glycosyltransferase 73C6"
                     /calculated_mol_wt=55579
     Region          1..483
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(19..20,22,172,175..176,180,207,287,365,367,369..370,
                     373)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,287,365,367,369..370)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..498
                     /gene="LOC107933420"
                     /coded_by="XM_016865628.2:35..1531"
                     /db_xref="GeneID:107933420"
ORIGIN      
        1 mgsqtqqphf vlfpsmaqgh lipmvdigrl laqrnvivti vttphnasrv qktidraves
       61 grairlvqlr fpgkearlpd gvenidmiss medlfkffta ansmdeavqe lfekltprpi
      121 ciisdmflhy tlkiatkfqv prisfhgicc fcylcvhnlk sskildnvts dyecfkvpgl
      181 aekveftkpq lplnldeswk dvfntttkad easygdvins feelespyvk eyrkitkawc
      241 igpvslshkn eldkaergkk asineqqclk wldsqepnsv iyaclgsmst mkspelielg
      301 lgleasnkaf iwilrgnnda snqvmkwiee dgfeerikgr gfvvvgwapq alilshpaig
      361 gflthcgwns tiegisagvp lltlplfadq ftnerlvvqi lkigvsvgan eptawgdeks
      421 gfmlkkehvk nainqlmneg negierrkra kvfgekanka vevggssyln mtlliqdiiq
      481 qsskmgvdmi ptshrhen
//
LOCUS       XP_016721114             384 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: probable serine/threonine-protein kinase PBL23
            [Gossypium hirsutum].
ACCESSION   XP_016721114
VERSION     XP_016721114.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865625.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721114.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..384
                     /product="LOW QUALITY PROTEIN: probable
                     serine/threonine-protein kinase PBL23"
                     /calculated_mol_wt=42485
     Region          87..356
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(87..91,95,108,110,139,155..158,162,164,208,210,
                     212..213,215,226,229,247..250)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(87..91,95,108,110,139,155..158,162,208,210,212..213,
                     215,226)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(91,162,164,208,210,212,229,247..250)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(225..232,243..250)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..384
                     /gene="LOC107933417"
                     /coded_by="XM_016865625.2:377..1531"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107933417"
ORIGIN      
        1 mncfsccmse ekinskrsas leksgtneak tvpmpsfani sfksdasrkr yiseeilkrg
       61 ksnitaktfn yrdlctatnn fnpenqlgex gfgrvykgqv epnqqvvaik qldrngyqgn
      121 reflvevlml sllnhpnlvt lvgycadgdq rilvyeyman gsleshlldi ppdkkpldwn
      181 triqvaigaa kgleylheta dppviyrdfk asnilldqdf npklsdfgla kigptgdksh
      241 vstrvmgtyg ycapeyaltg qltaksdvys fgvvflemit grrvidnsrp teeqnlvnwa
      301 tplfkdrrnf qlmadplleg nypskglhqa lavaamclqd daaarpamsd vvtaleyltn
      361 gggpegeeed ddeeeedeek kkss
//
LOCUS       XP_016721109             113 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016721109
VERSION     XP_016721109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865620.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12367
     Region          33..75
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     CDS             1..113
                     /gene="LOC107933412"
                     /coded_by="XM_016865620.2:452..793"
                     /db_xref="GeneID:107933412"
ORIGIN      
        1 matsdeccsv qlidgdgsfn dtgiesfike vklhecglsy avvsimgpqs svatpkqire
       61 lmqvdgltnd evkshsfmsr clvsvhyfgl kllvvgicqw kqpcfcscip ffh
//
LOCUS       XP_016721113             777 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016721113
VERSION     XP_016721113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865624.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..777
                     /product="uncharacterized protein"
                     /calculated_mol_wt=86670
     Region          96..454
                     /region_name="PMD"
                     /note="Plant mobile domain; pfam10536"
                     /db_xref="CDD:463139"
     CDS             1..777
                     /gene="LOC107933416"
                     /coded_by="XM_016865624.2:79..2412"
                     /db_xref="GeneID:107933416"
ORIGIN      
        1 megssnsive eraelmvspd nknlelrtah fitpstglts idgnlpnhcl ssltkiypkn
       61 ramevnfvgw rhpqkewkaw aanmaslhes twkeagifea imnstykier nndlvfgvae
      121 kwchetnsfi fpwgeatitl edimilggys vlgspvfapv eteemeetwe klenarkemy
      181 ksttkkashs lwirkfmhsg seieheafla lwlsrfvlps sfdvvvnivf piaihlargt
      241 rialgpaala kiysdlsclk qniiastqld skcdggnvav alevtlcsql tlvqvwvwer
      301 fpdlrpkpnl iengdprlal whdlkckvqd vrsvldkske rfdwrpyvdc gkfygdtaiw
      361 isvdlsldde llsfaqclra selvglecie qylphrvalq fgmdqdipcs vprsndspvi
      421 awsnynnsvg ggklyipskl fkgdvtakys nwwkqsvlil qeesidvllk qrsstnfkmt
      481 pngtmginet dmfrglklip mclkrpredd tysgfktmpk kfvmqcfvar sssiaigsea
      541 dtevknests ssslsklkpd fviqkelnns sfppgfppkg nmlqakgsfn rdkvtvavpv
      601 ppgfipkssi tedkinppvp pgfpskcnmv evrdivdard fvedkvtvtm ggnhsashlg
      661 slsldsdded qltisqmskp ykkfgnidrr dalenssgqc svadnvlprc elittlgaee
      721 dahgasivpa iycnacpneq swlhlearis kletllgkmk aarevkslvt kgwvnld
//
LOCUS       XP_016721108             151 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016721108
VERSION     XP_016721108.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865619.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721108.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16456
     CDS             1..151
                     /gene="LOC107933411"
                     /coded_by="XM_016865619.2:169..624"
                     /db_xref="GeneID:107933411"
ORIGIN      
        1 mesksknlvl gfvvlavfli sgvkswtgei hgrvicdvca dssigpedhi legaevavlc
       61 itksgevvny qaftnakgiy tvaetmpesd rwntclarpi ssfhdhcnhl gdrstgikft
      121 ysrpsghfht vrpfvyqpct apsyctetls e
//
LOCUS       XP_016721130             528 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016721130
VERSION     XP_016721130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865641.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..528
                     /product="uncharacterized protein"
                     /calculated_mol_wt=60136
     CDS             1..528
                     /gene="LOC107933431"
                     /coded_by="XM_016865641.2:103..1689"
                     /db_xref="GeneID:107933431"
ORIGIN      
        1 mfsimassss ffvrcfpllf ffffshvqav kspihprdvl pllprqvswp ilnslnsaid
       61 llpafvgsvs sqnhivswkg acfyentarm efhnksgsef gggtlhikvs kahswtcldl
      121 ylfatpyrvt wdyyflsreh tleidkwedr aeyeyvknkg isiflmqagm lgtlealwev
      181 fplftntgwg esanlgflkk hmgasfesrp qpwytnisvd dihsgdflvi skirgrwggf
      241 etlekwvtgs yaghsavflk dsegklwvge sghenekged iiavipwdew wdlelnkdds
      301 nphiavlplh pdvrakfnet aaweyalsma gkpygyhnll fswidtidgn ypppldahlv
      361 asamtvwskm qpeyaanlws ealnkrlgtk gldlsdilve iekrgssfdq lltvpeqddw
      421 iysdgkstsc iafvlemyke aglfdpiads iqvteftikd aytlrffenn ssrlpkwcnd
      481 adnvklpycq ilgkyrmelp gfnsmdpyph mnercpskpp kysrppnc
//
LOCUS       XP_016721131             474 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 716B1 [Gossypium hirsutum].
ACCESSION   XP_016721131
VERSION     XP_016721131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865642.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..474
                     /product="cytochrome P450 716B1"
                     /calculated_mol_wt=54210
     Region          60..470
                     /region_name="CYP90-like"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; cd11043"
                     /db_xref="CDD:410669"
     Site            order(122,126,133,177,278..279,282..283,286..287,290,344,
                     353,355,378,412..414,418..422,425..426)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410669"
     Site            order(200..201,278,281..282,286,351..354)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410669"
     CDS             1..474
                     /gene="LOC107933432"
                     /coded_by="XM_016865642.2:1..1425"
                     /db_xref="GeneID:107933432"
ORIGIN      
        1 mntiitvllf lipvfllltk rkrspqrvpp gslglpligq slgllramrs ntaeewlrkr
       61 irkygpiskm rlfgkpavfi ygqaankfvf asdssnivnq qvksvssilg drcileltge
      121 dhkrvrdalv sflkpeslkq yvgkmdeevr nhlemhwhgk qqvtvlplmk tltfniicsl
      181 lfgvergtrr dklandfrym iegmwsvpvn lpftrynrsl qasaraqkll kvligekrvd
      241 lekgasprqd litcllsirn ekdeqvisek eiihnvmlim vagydtssvl ltfllrlfan
      301 yptiyaavlq eqdeiarrkp ngelltwedl akmkytwkva metlrmfppi fggfrkvvkd
      361 ieyggyfipk dwlifwvtgi tqmddtifpe pskfnpsrfe npaslppycf ipfgggpric
      421 pgyefariet lvsihylitr ftwnllcsdn sfsrdpmpvp tkglpvqisp rklp
//
LOCUS       XP_016721132             311 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid desaturase 4, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016721132
VERSION     XP_016721132.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721132.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="fatty acid desaturase 4, chloroplastic"
                     /calculated_mol_wt=34380
     Region          122..290
                     /region_name="Lipid_desat"
                     /note="Lipid desaturase domain; pfam10520"
                     /db_xref="CDD:463132"
     CDS             1..311
                     /gene="LOC107933433"
                     /coded_by="XM_016865643.2:1..936"
                     /db_xref="GeneID:107933433"
ORIGIN      
        1 msilkqhrcp srslthists prlhlvarlt csatttttkp kssqnqlvie prletkpdsi
       61 tpiipsvgpp lsndpslqst wshrawvasg cttlffslak tvtgaadthm wfepivggyv
      121 gyvladllsg vyhwgidnyg dattpifgsq iegfqghhkw pwtitrrqfa nnlhalarsi
      181 tltvlpieil cndpviqgfv ivcagcimfs qqfhawshgt ksklpplvva lqdagvlvsr
      241 sqhsahhrpp ynsnycivsg vcnefldknk vfealemiif fklgvrprsw sepgaewiee
      301 mdeaqsqvtv h
//
LOCUS       XP_016721133             249 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 22 homolog 1 [Gossypium
            hirsutum].
ACCESSION   XP_016721133
VERSION     XP_016721133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865644.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..249
                     /product="vacuolar protein sorting-associated protein 22
                     homolog 1"
                     /calculated_mol_wt=27874
     Region          5..225
                     /region_name="EAP30"
                     /note="EAP30/Vps36 family; pfam04157"
                     /db_xref="CDD:461201"
     CDS             1..249
                     /gene="LOC107933434"
                     /coded_by="XM_016865644.2:78..827"
                     /db_xref="GeneID:107933434"
ORIGIN      
        1 mrrrpgiggl qtaaaardqy ralgenvakl rtdlmkeqla tfrsqleefa rkhkndirkn
       61 psfrsqfhem cakvgvdpla snkgfwaell gigdfyyelg vqiveiclat rplngglidl
      121 qelckllrqk rkhdreavse ddclraiskl ktlgsgfevi sagkkklvrs vptelnkdhn
      181 qilelaqaqg yvtvdeverr lswthgraid aldtlldegl amiddghrdg krcywfpcvs
      241 sissfgadn
//
LOCUS       XP_040942927             119 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 5 [Gossypium hirsutum].
ACCESSION   XP_040942927
VERSION     XP_040942927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086993.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="protein FATTY ACID EXPORT 5"
                     /calculated_mol_wt=12521
     Region          6..101
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..119
                     /gene="LOC121213825"
                     /coded_by="XM_041086993.1:257..616"
                     /db_xref="GeneID:121213825"
ORIGIN      
        1 mhdfcftipy glilvaggvi gylkkgsias lgggvgtgli lilaanlslk afekrknsyf
       61 alvletvtaa vltwvmgqry yqtskimpag ivagisflmt gfylyklatg gnhipakae
//
LOCUS       XP_040942928             413 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein RBP45C [Gossypium hirsutum].
ACCESSION   XP_040942928
VERSION     XP_040942928.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086994.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..413
                     /product="polyadenylate-binding protein RBP45C"
                     /calculated_mol_wt=45343
     Region          82..160
                     /region_name="RRM1_SECp43_like"
                     /note="RNA recognition motif 1 (RRM1) found in tRNA
                     selenocysteine-associated protein 1 (SECp43) and similar
                     proteins; cd12344"
                     /db_xref="CDD:409780"
     Region          173..252
                     /region_name="RRM2_SECp43_like"
                     /note="RNA recognition motif 2 (RRM2) found in tRNA
                     selenocysteine-associated protein 1 (SECp43) and similar
                     proteins; cd12345"
                     /db_xref="CDD:409781"
     Region          281..352
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..413
                     /gene="LOC107933435"
                     /coded_by="XM_041086994.1:83..1324"
                     /db_xref="GeneID:107933435"
ORIGIN      
        1 mmqqppaggv apppsmaadp sqtqqyqkqq qsqpwmmmsq qqqagqpvpp pagwnpqpvp
       61 ppsqmqqysa gsatvgsgei rslwigdlqp wmdenylisi faqtgevvsa kvirnkqtal
      121 pegygfiefv sraaaervlq lyngvpmpns eqnfrlnwaa lgygekrqee gpdytifvgd
      181 laadvsdyml qetfkavyps vksakvvtdr ttgrskgygf vkfgdeteqi ramtemngiy
      241 cstramrigp aankkpvtdq qyqkaayqnt qgnsgendpn nttifvggld psvsedqlkq
      301 ifsqlgevvh vkipankhcg fvqyanrasa eqalsvlngt vlggrnvrls wgrspsskqv
      361 qpdqaqwntg yygyaqgyea ygyapppqdp nmyyggypgy gnyqqpgayq qqq
//
LOCUS       XP_016721116             311 aa            linear   PLN 06-AUG-2024
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Gossypium
            hirsutum].
ACCESSION   XP_016721116
VERSION     XP_016721116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /calculated_mol_wt=35012
     Region          96..298
                     /region_name="PlsC"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     [Lipid transport and metabolism]; COG0204"
                     /db_xref="CDD:439974"
     CDS             1..311
                     /gene="LOC107933418"
                     /coded_by="XM_016865627.2:156..1091"
                     /db_xref="GeneID:107933418"
ORIGIN      
        1 mensasgsfl rnrrlesfle tksgpnvret qkipskqvia rqrpnktdaf vdddgwiptl
       61 iscvrivtcy lammvttfiw aiimlmllpw psqrvrqgni yghvtgrllm wilgnplkie
      121 gtefsnerai yicnhaspid iflimwltpt gtvgiakkei iwyplfgqly vlanhlridr
      181 sdpstaiksm kkavqavkkh glslivfpeg trskngrllp fkkgfvhlai esglpivpii
      241 ltgthlawrk gslhvrpapi svkylppikt dswtadkind yikmvhdiyv enlpeaqkpi
      301 stddtknssr s
//
LOCUS       XP_016721115             311 aa            linear   PLN 06-AUG-2024
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Gossypium
            hirsutum].
ACCESSION   XP_016721115
VERSION     XP_016721115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865626.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /calculated_mol_wt=35012
     Region          96..298
                     /region_name="PlsC"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     [Lipid transport and metabolism]; COG0204"
                     /db_xref="CDD:439974"
     CDS             1..311
                     /gene="LOC107933418"
                     /coded_by="XM_016865626.2:468..1403"
                     /db_xref="GeneID:107933418"
ORIGIN      
        1 mensasgsfl rnrrlesfle tksgpnvret qkipskqvia rqrpnktdaf vdddgwiptl
       61 iscvrivtcy lammvttfiw aiimlmllpw psqrvrqgni yghvtgrllm wilgnplkie
      121 gtefsnerai yicnhaspid iflimwltpt gtvgiakkei iwyplfgqly vlanhlridr
      181 sdpstaiksm kkavqavkkh glslivfpeg trskngrllp fkkgfvhlai esglpivpii
      241 ltgthlawrk gslhvrpapi svkylppikt dswtadkind yikmvhdiyv enlpeaqkpi
      301 stddtknssr s
//
LOCUS       XP_040942929             703 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942929
VERSION     XP_040942929.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086995.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..703
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=79290
     Region          <235..>448
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..703
                     /gene="LOC107933426"
                     /coded_by="XM_041086995.1:304..2415"
                     /db_xref="GeneID:107933426"
ORIGIN      
        1 mkvtgkaslp atfsgrnptd adlkpttkrk arnrrwkrvg gtpvvgrrsr petpllkwkv
       61 eerekergke kgrgveeele deveeeengg rrgggrghrr kgapkvsark laaglwllql
      121 petvtssvae rrsdrlgfkp gkdfvgvpfh yhhkdkicss dakdplqspg sasgtkngll
      181 rkiepsiqfs nsamegatkw dpvclkttde vrqiynhmkr idqqvsavsi vsaleaeleq
      241 arayieelet errsskkkle hflrkvseer aawrsrehek irafvddvka dlnrekkkrq
      301 rleivnsklv nelaaaklsa kqymqdyeke rkarelieev cdelakeige dkaeveaikr
      361 dsmklreevd eerkmlqmae vwreervqmk lidakvalee rysqmnklia dletflrsrt
      421 gnldtkdmqe aeslreaaes vnvkeikeft yepanpddif avfedvafge anereiepft
      481 ayspashask vlmvspemnm mkkdsimkhs nalfdqndei eedesgwetv shledqgssy
      541 spkrsaasvt rnhrdsnfsg sgteweenac gdtpiteise vcslparqsk kassitrlwr
      601 scpnngenyk tisvegangr lsngrksngg ivspdrgsgk gglspsmgqw sspdsghphi
      661 tkgmkgcidw prgaqknslk akllearmes qkvqlrhvlk qki
//
LOCUS       XP_040942930             660 aa            linear   PLN 06-AUG-2024
DEFINITION  probable DNA double-strand break repair Rad50 ATPase isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942930
VERSION     XP_040942930.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086996.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..660
                     /product="probable DNA double-strand break repair Rad50
                     ATPase isoform X2"
                     /calculated_mol_wt=74686
     Region          <192..>405
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..660
                     /gene="LOC107933426"
                     /coded_by="XM_041086996.1:317..2299"
                     /db_xref="GeneID:107933426"
ORIGIN      
        1 mkvtgkaslp atfsgrnptd adlkpttkrk arnrrwkrvg gtpvvgrrsr petpllkwkv
       61 eerekergke kgrgveeele deveeeengg rrgggrghrr kgapkvsark laaglwllql
      121 petvtssvae rrsdrlgfki epsiqfsnsa megatkwdpv clkttdevrq iynhmkridq
      181 qvsavsivsa leaeleqara yieeleterr sskkklehfl rkvseeraaw rsrehekira
      241 fvddvkadln rekkkrqrle ivnsklvnel aaaklsakqy mqdyekerka relieevcde
      301 lakeigedka eveaikrdsm klreevdeer kmlqmaevwr eervqmklid akvaleerys
      361 qmnkliadle tflrsrtgnl dtkdmqeaes lreaaesvnv keikeftyep anpddifavf
      421 edvafgeane reiepftays pashaskvlm vspemnmmkk dsimkhsnal fdqndeieed
      481 esgwetvshl edqgssyspk rsaasvtrnh rdsnfsgsgt eweenacgdt piteisevcs
      541 lparqskkas sitrlwrscp nngenyktis vegangrlsn grksnggivs pdrgsgkggl
      601 spsmgqwssp dsghphitkg mkgcidwprg aqknslkakl learmesqkv qlrhvlkqki
//
LOCUS       XP_016721124             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_016721124
VERSION     XP_016721124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865635.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_016865635.2:190..816"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_040942931             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_040942931
VERSION     XP_040942931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086997.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_041086997.1:168..794"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_016721126             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_016721126
VERSION     XP_016721126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865637.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_016865637.2:231..857"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_016721127             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_016721127
VERSION     XP_016721127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865638.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_016865638.2:190..816"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_040942933             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_040942933
VERSION     XP_040942933.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041086999.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_041086999.1:215..841"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_016721125             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_016721125
VERSION     XP_016721125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865636.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_016865636.2:247..873"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_040942934             208 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2
            [Gossypium hirsutum].
ACCESSION   XP_040942934
VERSION     XP_040942934.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087000.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 2"
                     /calculated_mol_wt=23322
     Region          3..164
                     /region_name="OTU_plant_OTU1_2-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU1 and OTU2 from plants and similar proteins;
                     cd22793"
                     /db_xref="CDD:438614"
     Site            order(16,53..54,56,62,65,72..77,98,100,102..105,116,
                     118..121)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438614"
     CDS             1..208
                     /gene="LOC107933427"
                     /coded_by="XM_041087000.1:40..666"
                     /db_xref="GeneID:107933427"
ORIGIN      
        1 megiivrrvi psdnsclfna igyvmdhdkt kaselrqvia atvasdptky seaflgkpnv
       61 eycswildse kwggaielsi ladyygreia aydiqtsrcd lygqernyse rvmliydglh
      121 ydalamspfe dapeefdqti favqkdrtig pveglalnlv kdqqskrryt dtanftlrcg
      181 vcqigvigqk eavehaqatg hvnfqeyr
//
LOCUS       XP_040942935              98 aa            linear   PLN 06-AUG-2024
DEFINITION  reactive Intermediate Deaminase A, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942935
VERSION     XP_040942935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087001.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="reactive Intermediate Deaminase A, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=11044
     Region          <45..90
                     /region_name="YjgF_YER057c_UK114_family"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; cl10015"
                     /db_xref="CDD:447879"
     Site            order(50,54,68,83)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
     CDS             1..98
                     /gene="LOC107933428"
                     /coded_by="XM_041087001.1:1225..1521"
                     /db_xref="GeneID:107933428"
ORIGIN      
        1 myvrvllyca ilfcipgifv mgcisflcrk glirlllihl llrladlkdf kkvneiyaky
       61 fpspaparst crvaalplda kiefeciaal rhdkress
//
LOCUS       XP_040942936              78 aa            linear   PLN 06-AUG-2024
DEFINITION  reactive Intermediate Deaminase A, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942936
VERSION     XP_040942936.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087002.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..78
                     /product="reactive Intermediate Deaminase A, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=8728
     Region          <25..70
                     /region_name="YjgF_YER057c_UK114_family"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; cl10015"
                     /db_xref="CDD:447879"
     Site            order(30,34,48,63)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
     CDS             1..78
                     /gene="LOC107933428"
                     /coded_by="XM_041087002.1:1761..1997"
                     /db_xref="GeneID:107933428"
ORIGIN      
        1 mgcisflcrk glirlllihl llrladlkdf kkvneiyaky fpspaparst crvaalplda
       61 kiefeciaal rhdkress
//
LOCUS       XP_040942937             244 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942937
VERSION     XP_040942937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087003.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..244
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=27561
     Region          122..>176
                     /region_name="ORC2"
                     /note="Origin recognition complex subunit 2; cl27198"
                     /db_xref="CDD:474902"
     CDS             1..244
                     /gene="LOC107933424"
                     /coded_by="XM_041087003.1:16..750"
                     /db_xref="GeneID:107933424"
ORIGIN      
        1 mpptppppqv lksksftskf rfpslqmppa mpllklpclc ssppslaplp plfllirrpr
       61 vvasmramlt atpvlppats spsaltaalv prdvqvdfdd ktrweylfkv ywvllkekla
      121 ltldeltnst npwkelreas aniepkhqnd vadlinsyks lypkwvfdlr vvnfygrkgi
      181 lpsqqrkrqt lslwlkasvq dlasraasra maeaaksisl qiqhinlrfp vepylvtvry
      241 rlif
//
LOCUS       XP_040942938             225 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942938
VERSION     XP_040942938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087004.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=25509
     Region          122..>170
                     /region_name="ORC2"
                     /note="Origin recognition complex subunit 2; cl27198"
                     /db_xref="CDD:474902"
     CDS             1..225
                     /gene="LOC107933424"
                     /coded_by="XM_041087004.1:16..693"
                     /db_xref="GeneID:107933424"
ORIGIN      
        1 mpptppppqv lksksftskf rfpslqmppa mpllklpclc ssppslaplp plfllirrpr
       61 vvasmramlt atpvlppats spsaltaalv prdvqvdfdd ktrweylfkv ywvllkekla
      121 ltldeltnst npwkelreas aniepkhqnd vadlinsyks lypkwvfdls wrsmgflqsp
      181 rpinqnnkny vsgivkrrnl sefdmsklgi gvddekserk nrkrh
//
LOCUS       XP_040942939             237 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942939
VERSION     XP_040942939.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087005.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..237
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=26725
     Region          122..>172
                     /region_name="ORC2"
                     /note="Origin recognition complex subunit 2; cl27198"
                     /db_xref="CDD:474902"
     CDS             1..237
                     /gene="LOC107933424"
                     /coded_by="XM_041087005.1:17..730"
                     /db_xref="GeneID:107933424"
ORIGIN      
        1 mpptppppqv lksksftskf rfpslqmppa mpllklpclc ssppslaplp plfllirrpr
       61 vvasmramlt atpvlppats spsaltaalv prdvqvdfdd ktrweylfkv ywvllkekla
      121 ltldeltnst npwkelreas aniepkhqnd vadlinsyks lypkwvfdlr kgilpsqqrk
      181 rqtlslwlka svqdlasraa sramaeaaks islqiqhinl rfpvepylvt vryrlif
//
LOCUS       XP_040942940             236 aa            linear   PLN 06-AUG-2024
DEFINITION  NEP1-interacting protein-like 1 [Gossypium hirsutum].
ACCESSION   XP_040942940
VERSION     XP_040942940.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087006.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..236
                     /product="NEP1-interacting protein-like 1"
                     /calculated_mol_wt=25813
     Region          182..225
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            210..215
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..236
                     /gene="LOC121213827"
                     /coded_by="XM_041087006.1:70..780"
                     /db_xref="GeneID:121213827"
ORIGIN      
        1 mlmewfscit evpfrcgdwv faamkhlpig ffisvfkrtf faastctfal ggsmvgtvvg
       61 amkgqttetg flrgagigav agaitavqll eslvdgesls kvallvslvn gkvfiewvsp
      121 avlkayqwqv ssnsveptyr eisdiydvng akglsrhciq rlplhqfrss ddiiiksmee
      181 pccsiclqgl kegemgrnlp rcghsfhlnc idewlsrqgt cpmcrehvln dashql
//
LOCUS       XP_016732628             537 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 33 [Gossypium hirsutum].
ACCESSION   XP_016732628
VERSION     XP_016732628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..537
                     /product="calcium-dependent protein kinase 33"
                     /calculated_mol_wt=60329
     Region          89..347
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(96..100,104,117,119,152,168..171,175,177,213..214,
                     216,218..219,221,234..235,238,252..256,258)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(96..99,104,117,119,152,168..171,175,218..219,221,
                     234..235)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(100,175,177,213..214,216,218,238,252..256,258)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(234..242,252..256)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          384..529
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..537
                     /gene="LOC107943387"
                     /coded_by="XM_016877139.2:382..1995"
                     /db_xref="GeneID:107943387"
ORIGIN      
        1 mgscltkskd skpkhngygs gptttaavhq qryqepvrpa pvqsqfhhip ekpgtqtswk
       61 pvapspspkp vaprvdtilg kpfedirvhy tigkelgkgq fgvtylcien stgkqyackt
      121 iskkklvtrn dkedmrreiq imqhlsgqpn ivefkgayed klsvhlvmel caggelfdri
      181 iakghysera aasicraivn vvhachfmgv mhrdlkpenf llsskgenal lkatdfglsv
      241 ffedgkvykd ivgsayyvap evllrkygke idiwsagvil yillsgvppf waetekgifd
      301 ailegeidfe sqpwpsises akdlvrrmlt qdpkkritst qvlehpwire ggsasdkpid
      361 savlsrmkqf rrmnklkqla lkviaenlss eeiqglkqmf anidtdnsgt ityeelktgl
      421 arlgskltea evqqlmeaad vdgngsidyi efitatmhrh rlerdehlyk afqhfdkdns
      481 gyitrdelea amkeygmgdd dtikeiisev dtdndgkiny eefrdmmrsg tqhtqlf
//
LOCUS       XP_016732630             112 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translation factor SUI1 homolog [Gossypium hirsutum].
ACCESSION   XP_016732630
VERSION     XP_016732630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="protein translation factor SUI1 homolog"
                     /calculated_mol_wt=12473
     Region          5..112
                     /region_name="eIF1_SUI1_like"
                     /note="Eukaryotic initiation factor 1 and related
                     proteins; cl00229"
                     /db_xref="CDD:469673"
     Site            order(37,40..41,43,60,63..65,67..69,71,85,88)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            87..88
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..112
                     /gene="LOC107943388"
                     /coded_by="XM_016877141.2:302..640"
                     /db_xref="GeneID:107943388"
ORIGIN      
        1 mvdldvqipt tfdpfaeage fggtgtkeyv hiriqqrngk kslttvqglr hdlsyekilk
       61 slkkdfccng nvvkdkelgk iiqlqgdqrk nvsqflvnag ivkkdqikih gf
//
LOCUS       XP_016748514             148 aa            linear   PLN 06-AUG-2024
DEFINITION  cleavage stimulation factor subunit 77-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016748514
VERSION     XP_016748514.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893025.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748514.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..148
                     /product="cleavage stimulation factor subunit 77-like
                     isoform X1"
                     /calculated_mol_wt=17309
     Region          <11..>118
                     /region_name="Suf"
                     /note="Suppressor of forked protein (Suf); pfam05843"
                     /db_xref="CDD:428647"
     CDS             1..148
                     /gene="LOC107957504"
                     /coded_by="XM_016893025.2:673..1119"
                     /db_xref="GeneID:107957504"
ORIGIN      
        1 mwiktllysd vcryadflsc lnddrniral feralsslpq eesieiwkrf tqfektygdl
       61 asmlkveqrw kealsgtiee gasaletsll dlisrysfkd lwpcsskdld hlsrqeelqf
      121 hqtpllqfll lpicripwlq llvllqth
//
LOCUS       XP_016748515             145 aa            linear   PLN 06-AUG-2024
DEFINITION  cleavage stimulation factor subunit 77-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016748515
VERSION     XP_016748515.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893026.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016748515.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="cleavage stimulation factor subunit 77-like
                     isoform X2"
                     /calculated_mol_wt=16939
     Region          <11..>116
                     /region_name="Suf"
                     /note="Suppressor of forked protein (Suf); pfam05843"
                     /db_xref="CDD:428647"
     CDS             1..145
                     /gene="LOC107957504"
                     /coded_by="XM_016893026.2:673..1110"
                     /db_xref="GeneID:107957504"
ORIGIN      
        1 mwiktllysd vcryadflsc lnddrniral feralsslpq eesieiwkrf tqfektygdl
       61 asmlkveqrw kealsgtiee gasaletsll dlisrysfkd lwpcsskdld hlsrqefhqt
      121 pllqflllpi cripwlqllv llqth
//
LOCUS       XP_040942941            1554 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942941
VERSION     XP_040942941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087007.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1554
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=168271
     Region          <191..483
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <633..975
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <1011..>1482
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1554
                     /gene="LOC107943386"
                     /coded_by="XM_041087007.1:254..4918"
                     /db_xref="GeneID:107943386"
ORIGIN      
        1 mtvdevmavh aveeemaass sskvetvvke dhgkeneked sngtngktvr edtdgdgdyv
       61 yvngneaeng dlvesnldkn gngigvedqg fesletkgev kskfdlvekd escigivdqd
      121 kesvelchvk apvdeqksgd lveggpvsat nagmadqngi seltedvfvd knivkhtvse
      181 aavvdssarq sdeispvpgp dgngsandsa ldfrskeneg seiavaddgd csgdglvnds
      241 veapvseadv ldfrskeseg semtvaddgd csgdglvnds veapvseanv lyfrskedgg
      301 semavagdgd fngdgfvnds veatvsedtv ldfrskdned semavaddgd cngdglandn
      361 akatvceasv insrskeneg seitvaddgd cngdslands akttvseasv idsrskenag
      421 semavadggd cnanglsnds aeatvseanv idsrseekeg sgvavaadgd csgdglands
      481 anatvsetnv idssseekeg semtvaadgd yggdglpnds akatvsganv eesevavvvn
      541 gdcsgdglan gsaeaavsea avvtrnehkg vcddevpivs vpdsngdcfp dvsendtvse
      601 avlvdsrveq ndgvpvcvsg sdtvedtsev fkpeqnesea dspgpvsdgd gygyrpeqng
      661 fsgiaetvlp dvasgnelvk dgesltavdd fpvesgsdle pnterdlcle adihleketg
      721 ngslsdecge alqdvhtqdg iseavqidns sdsglnsqqg qssefvesin envhveratt
      781 ndmvtdsadv aegssskvml snnlsiengv idttdktfpp ssvddeklet egensrvgld
      841 pclvensemd ikaesdsidd kfksrcvand ddsiiskeae vskvlvechs tetdeklvav
      901 advqddsnsv aavsndekaa apieqlsadi sdndelvyes resdcdtnnn eqtcavikgg
      961 iqfgsvvtgq epeepegvde verkspfyfl irvprydden lkekirltqi rvdeetqsrd
     1021 airieiqkmr avckkygdni daaisqerav rdlhrskrqe idsiqsmmni edidaqirnm
     1081 ehmiqhetmp lkdekqfihq ikqfkqtrer isssmskqde vqqgldqkdq ikermkplkk
     1141 eadqlkvnll kaeavtkaak keyhdetekl nklqsqfkaa ddirqeayal lqslkkqsye
     1201 knkyfyqyrd dakaandlal kgdkealqnl cvnqvekfme lwnnndefrk eyircntrst
     1261 lrrlrtldgr algpdeeppv ipaipkvvne rvakdqtvss stleertqek tapakaeiak
     1321 akpaaksmeq knltsksekp vksvppasgs ttassrdkie eaeekpkitk eeeemarkae
     1381 esrkeeeaak lreqrrleei tkakealerk rrnaekaqar aalraqkeae qkekerekra
     1441 kkkerrkvaa agvgdasvtd etesaltlet paetpkdses kekpvtvakr sqkppqftkq
     1501 skaksipppl rnrgkrrmqq wmwvlvtsli vlalflagny nfsfnfgllq kfnf
//
LOCUS       XP_040942942            1499 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942942
VERSION     XP_040942942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087008.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1499
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=162459
     Region          <191..483
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <633..898
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <956..>1427
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1499
                     /gene="LOC107943386"
                     /coded_by="XM_041087008.1:237..4736"
                     /db_xref="GeneID:107943386"
ORIGIN      
        1 mtvdevmavh aveeemaass sskvetvvke dhgkeneked sngtngktvr edtdgdgdyv
       61 yvngneaeng dlvesnldkn gngigvedqg fesletkgev kskfdlvekd escigivdqd
      121 kesvelchvk apvdeqksgd lveggpvsat nagmadqngi seltedvfvd knivkhtvse
      181 aavvdssarq sdeispvpgp dgngsandsa ldfrskeneg seiavaddgd csgdglvnds
      241 veapvseadv ldfrskeseg semtvaddgd csgdglvnds veapvseanv lyfrskedgg
      301 semavagdgd fngdgfvnds veatvsedtv ldfrskdned semavaddgd cngdglandn
      361 akatvceasv insrskeneg seitvaddgd cngdslands akttvseasv idsrskenag
      421 semavadggd cnanglsnds aeatvseanv idsrseekeg sgvavaadgd csgdglands
      481 anatvsetnv idssseekeg semtvaadgd yggdglpnds akatvsganv eesevavvvn
      541 gdcsgdglan gsaeaavsea avvtrnehkg vcddevpivs vpdsngdcfp dvsendtvse
      601 avlvdsrveq ndgvpvcvsg sdtvedtsev fkpeqnesea dspgpvsdgd gygyrpeqng
      661 fsgiaetvlp dvasgnelvk dgesltavdd fpvesgsdle pnterdlcle adihleketg
      721 ngslsdecge alqdvhtqdg iseavqidns sdsglnsqqd ktfppssvdd ekletegens
      781 rvgldpclve nsemdikaes dsiddkfksr cvandddsii skeaevskvl vechstetde
      841 klvavadvqd dsnsvaavsn dekaaapieq lsadisdnde lvyesresdc dtnnneqtca
      901 vikggiqfgs vvtgqepeep egvdeverks pfyflirvpr yddenlkeki rltqirvdee
      961 tqsrdairie iqkmravckk ygdnidaais qeravrdlhr skrqeidsiq smmniedida
     1021 qirnmehmiq hetmplkdek qfihqikqfk qtrerisssm skqdevqqgl dqkdqikerm
     1081 kplkkeadql kvnllkaeav tkaakkeyhd eteklnklqs qfkaaddirq eayallqslk
     1141 kqsyeknkyf yqyrddakaa ndlalkgdke alqnlcvnqv ekfmelwnnn defrkeyirc
     1201 ntrstlrrlr tldgralgpd eeppvipaip kvvnervakd qtvssstlee rtqektapak
     1261 aeiakakpaa ksmeqknlts ksekpvksvp pasgsttass rdkieeaeek pkitkeeeem
     1321 arkaeesrke eeaaklreqr rleeitkake alerkrrnae kaqaraalra qkeaeqkeke
     1381 rekrakkker rkvaaagvgd asvtdetesa ltletpaetp kdseskekpv tvakrsqkpp
     1441 qftkqskaks ippplrnrgk rrmqqwmwvl vtslivlalf lagnynfsfn fgllqkfnf
//
LOCUS       XP_016732631             349 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732631
VERSION     XP_016732631.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732631.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..349
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38674
     Region          25..>166
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          107..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          132..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          158..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          207..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..349
                     /gene="LOC107943391"
                     /coded_by="XM_016877142.2:172..1221"
                     /db_xref="GeneID:107943391"
ORIGIN      
        1 mekgksarqa veislkkldl nadwnfkssr lipslhssrl riektkppsl vslclgvigr
       61 hleeiiedls eiavnfpadi kiplaaiarr rkllnddviv sladssweil dlsgsdvsnf
      121 glakvaemck slravdisqc kkitangvse lvrhchslet mrcggcpsse starrclgil
      181 kpklndvegd sweeldtmei ghgaqslrwl vwpkidedsl emlsaecpri ivnpkpslfg
      241 fkgtevprea fpdvalddpi vedidpktws icrsmpkams pslssanels iaekfrlafv
      301 erdtrlapkr aknarqhqrr aerewmmtst rakalalask atkslhgrs
//
LOCUS       XP_040942943             377 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP synthase gamma chain, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040942943
VERSION     XP_040942943.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087009.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="ATP synthase gamma chain, chloroplastic"
                     /calculated_mol_wt=41815
     Region          57..375
                     /region_name="ATP-synt"
                     /note="ATP synthase; pfam00231"
                     /db_xref="CDD:459722"
     CDS             1..377
                     /gene="LOC121213828"
                     /coded_by="XM_041087009.1:126..1259"
                     /db_xref="GeneID:121213828"
ORIGIN      
        1 myssnlptwv sskpsnsnkn illyqfnqnp flqfskrlpp kslsqspspf trircrlrel
       61 rkrietvkst qkiteamklv aaakvrraqe avingrpfte alvellytin eslqcddvdc
      121 pltvirpvkk valvvitgdr glcgsfnsav ikkaesrisn lkglgldytv isvgkkgnsy
      181 fsrkddvsve rfvegvgfpt akeaqmiadd vfslfvteev dkvelvytkf vslvksdpli
      241 rtllplsvrg evfdvngncv davedelfml ttkegklave rdkvrveggp isplmqfeqd
      301 pvqildammp lylnsqilra lqeslasela armnamsnat dnavelkknl sivynrerqa
      361 kitgeileiv agaealt
//
LOCUS       XP_016702790             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702790
VERSION     XP_016702790.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847301.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702790.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19939
     Region          16..>78
                     /region_name="NDUFA12"
                     /note="NADH ubiquinone oxidoreductase subunit NDUFA12;
                     pfam05071"
                     /db_xref="CDD:461542"
     CDS             1..177
                     /gene="LOC107917897"
                     /coded_by="XM_016847301.2:196..729"
                     /db_xref="GeneID:107917897"
ORIGIN      
        1 mskllsriag ffsnrtfigv dkagnryftr keeidgilke krwvefkgeq dptsisvewi
       61 cwlngqrkva ptpeemmele arrervrlnv allkkeeeer karegsrkav ssgkvggpdl
      121 ksfirqfpsa segdkveqas dgrikethee keepipesse ptgsgatykp gtwqppt
//
LOCUS       XP_016706371             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706371
VERSION     XP_016706371.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850882.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22341
     Region          22..203
                     /region_name="Senescence_reg"
                     /note="Senescence regulator; pfam04520"
                     /db_xref="CDD:461341"
     CDS             1..203
                     /gene="LOC107921028"
                     /coded_by="XM_016850882.2:508..1119"
                     /db_xref="GeneID:107921028"
ORIGIN      
        1 megdrysysr qgsgvwrslr dgdfeeedvw avlkerkdst nklgqqsies svpvrrhlps
       61 aarmipgtfs tinnssnigs sssssshean gvkqqsapvn ipdwsnisrn kskkgpnglw
      121 hdhddgdgdg vlvgfadsdd ddddddddde ynsklpphef lakrlarsqi ssfsvfegvg
      181 rklkgrdlrk vrnavltktg fle
//
LOCUS       XP_016708151             406 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,3-galactosyltransferase 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016708151
VERSION     XP_016708151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852662.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..406
                     /product="probable beta-1,3-galactosyltransferase 4
                     isoform X1"
                     /calculated_mol_wt=45374
     Region          1..406
                     /region_name="PLN03193"
                     /note="beta-1,3-galactosyltransferase; Provisional"
                     /db_xref="CDD:178735"
     CDS             1..406
                     /gene="LOC107922574"
                     /coded_by="XM_016852662.2:801..2021"
                     /db_xref="GeneID:107922574"
ORIGIN      
        1 mgwkskgles ntksfvtkkw tlllcigcfc agmlfsdrmw tvpeaedkvv sletgikder
       61 lklvtegcdp iqkdvkrgsk nivgevsktp naiqtldkti snlemelata ramqesiing
      121 spisddlkip essgkrkylm vvgintafss rkrrdsvrat wmpqgeerkk leeekgvvmr
      181 fvighsatsg gildraieae drkhgdilrl ehvegylels aktktyfata aalwdadfyv
      241 kvdddvhvni atlgatlarh rskprvyigc mksgpvlaqk gvryhepeyw kfgeegnkyf
      301 rhatgqlyai skdlasyisi nqhvlhkyan edvslgswfi gldvdhiddr rlccgttdce
      361 wkaqagnicv asfdwtcsgi crsvdrmkdv hrrcgegnna lrtatf
//
LOCUS       XP_040942944             359 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,3-galactosyltransferase 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942944
VERSION     XP_040942944.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087010.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="probable beta-1,3-galactosyltransferase 4
                     isoform X2"
                     /calculated_mol_wt=40054
     Region          1..356
                     /region_name="PLN03193"
                     /note="beta-1,3-galactosyltransferase; Provisional"
                     /db_xref="CDD:178735"
     CDS             1..359
                     /gene="LOC107922574"
                     /coded_by="XM_041087010.1:400..1479"
                     /db_xref="GeneID:107922574"
ORIGIN      
        1 mgwkskgles ntksfvtkkw tlllcigcfc agmlfsdrmw tvpeaedkvv sletgikder
       61 lklvtegcdp iqkdvkrgsk nivgevsktp naiqtldkti snlemelata ramqesiing
      121 spisddlkip essgkrkylm vvgintafss rkrrdsvrat wmpqgeerkk leeekgvvmr
      181 fvighsatsg gildraieae drkhgdilrl ehvegylels aktktyfata aalwdadfyv
      241 kvdddvhvni atlgatlarh rskprvyigc mksgpvlaqk gvryhepeyw kfgeegnkyf
      301 rhatgqlyai skdlasyisi nqhvlhkyan edvslgswfi gldvdhiddr rlccgttaa
//
LOCUS       XP_016707250             534 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB97 [Gossypium hirsutum].
ACCESSION   XP_016707250
VERSION     XP_016707250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851761.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..534
                     /product="transcription factor MYB97"
                     /calculated_mol_wt=58399
     Region          30..>136
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..534
                     /gene="LOC107921966"
                     /coded_by="XM_016851761.2:515..2119"
                     /db_xref="GeneID:107921966"
ORIGIN      
        1 mmmmggnnqi ttqnegggsn ngggeggiml kkgpwtaaed avladyvrth gegnwnavqk
       61 ntglarcgks crlrwanhlr pnlkkgafsp eeeriivelh akmgnkwarm atqlpgrtdn
      121 eiknywntrv krrqrqglpl yppeiqplys qhqrnqhrsl pstplpspta tptssfsfqt
      181 ppnpsssttl hasiltpahp lriprsassh vlynpqtppp lhsasavstp cpsplpsssp
      241 stptpvsplq sphkpafstl plfdsstsnt cnnnintnna ilqspsdfff pratpplqtp
      301 mrykrfrpdv sesinnerhn nsisvnggcs stsssfmsqy ppfqktsffn shaapnvtts
      361 tpltsphysp sytldpvtld lasssrilad hqnfdngqfi stpgfdytsk tdelpsnqfl
      421 sldgtsevtf dtkgncnyis ndqnnhhhls ihfgggglld dmleeaqlla gdndilrres
      481 cldgfntssd gltsgkeetv tdqeinatqe eysrllnaip ssmpmpdwyn ncgk
//
LOCUS       XP_016707909             391 aa            linear   PLN 06-AUG-2024
DEFINITION  probable tetraacyldisaccharide 4'-kinase, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016707909
VERSION     XP_016707909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852420.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..391
                     /product="probable tetraacyldisaccharide 4'-kinase,
                     mitochondrial"
                     /calculated_mol_wt=44212
     Region          15..390
                     /region_name="LpxK"
                     /note="Tetraacyldisaccharide-1-P 4'-kinase (Lipid A
                     4'-kinase) [Cell wall/membrane/envelope biogenesis];
                     COG1663"
                     /db_xref="CDD:441269"
     CDS             1..391
                     /gene="LOC107922400"
                     /coded_by="XM_016852420.2:75..1250"
                     /db_xref="GeneID:107922400"
ORIGIN      
        1 meklkqavke iayyrhqakf sklhlslipf lslasslyga llyirqslyr sgffsknrlp
       61 vpvisvgnlt wggngktpma efiakrlady gispliltrg yaggdeakml krhllggpvk
      121 vgvganrvat anlffekygy vdyrgskffe rtyldpkmgs hvgsqkigaa vlddgmqhws
      181 lcrdleivmi nglmpwgnck llplgplrep liaikrania vvhhadlvle qklkdiklvv
      241 qeikeslpif ytrmtpsyff elrniskkmh lgavlnavvl cvsaigspya fvramekigp
      301 lfvdrfdfsd hysfqlkdih mmrgrlrqle dkfgykpivi vtekdydrdp eilkhlypfk
      361 vlvlcsemqi ipcngcneds fksllkelle v
//
LOCUS       XP_040942945             391 aa            linear   PLN 06-AUG-2024
DEFINITION  probable tetraacyldisaccharide 4'-kinase, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040942945
VERSION     XP_040942945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087011.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..391
                     /product="probable tetraacyldisaccharide 4'-kinase,
                     mitochondrial"
                     /calculated_mol_wt=44212
     Region          15..390
                     /region_name="LpxK"
                     /note="Tetraacyldisaccharide-1-P 4'-kinase (Lipid A
                     4'-kinase) [Cell wall/membrane/envelope biogenesis];
                     COG1663"
                     /db_xref="CDD:441269"
     CDS             1..391
                     /gene="LOC107922400"
                     /coded_by="XM_041087011.1:75..1250"
                     /db_xref="GeneID:107922400"
ORIGIN      
        1 meklkqavke iayyrhqakf sklhlslipf lslasslyga llyirqslyr sgffsknrlp
       61 vpvisvgnlt wggngktpma efiakrlady gispliltrg yaggdeakml krhllggpvk
      121 vgvganrvat anlffekygy vdyrgskffe rtyldpkmgs hvgsqkigaa vlddgmqhws
      181 lcrdleivmi nglmpwgnck llplgplrep liaikrania vvhhadlvle qklkdiklvv
      241 qeikeslpif ytrmtpsyff elrniskkmh lgavlnavvl cvsaigspya fvramekigp
      301 lfvdrfdfsd hysfqlkdih mmrgrlrqle dkfgykpivi vtekdydrdp eilkhlypfk
      361 vlvlcsemqi ipcngcneds fksllkelle v
//
LOCUS       XP_016707911             387 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g55050 [Gossypium hirsutum].
ACCESSION   XP_016707911
VERSION     XP_016707911.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852422.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..387
                     /product="GDSL esterase/lipase At5g55050"
                     /calculated_mol_wt=43022
     Region          55..372
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(63,142,198,352,355)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(63,352,355)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(63,142,198)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..387
                     /gene="LOC107922402"
                     /coded_by="XM_016852422.2:42..1205"
                     /db_xref="GeneID:107922402"
ORIGIN      
        1 mklshlhlpt lnqsfffnkg mddgrgfrvk nlmlfllffc llslrmefsr aqmvpavfvf
       61 gdslvdvgnn nylpvsiaka dfphngidfp tkkptgrfsn gknaadllae klglpssppy
      121 lsllkktdes syingvsfas ggagifngtd qtygqsipll kqvdnyivvy kslvqqmgps
      181 gaekhlskal ftivigsndm ldyfgssdlr kksapqqfvd lmantlkgql krlyetgark
      241 fvltgigvig cipaervknk thkcneecnf wsvkyneelk amlkglkser qginysyfdt
      301 ysimqnviqk pssygfneie saccglgdlk akvpcvpisk ycsnrkdhvf wdlyhpteat
      361 arifvdtlfd gpsqycipmn vrqlvsa
//
LOCUS       XP_016708257             689 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708257
VERSION     XP_016708257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852768.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..689
                     /product="uncharacterized protein"
                     /calculated_mol_wt=76964
     Region          365..514
                     /region_name="Rab3-GTPase_cat"
                     /note="Rab3 GTPase-activating protein catalytic subunit;
                     pfam13890"
                     /db_xref="CDD:464022"
     CDS             1..689
                     /gene="LOC107922641"
                     /coded_by="XM_016852768.2:193..2262"
                     /db_xref="GeneID:107922641"
ORIGIN      
        1 meppsfvsra riafhsaaak aervltdlks dldsdrlspk efknesptre aesksihevk
       61 hskwmpanlg tkqewqerfk nirlgkkgve dsekvenstm avacydenly llkvkndvea
      121 kaseavpsvd ilnsintnni pptsvikqla iaaeagrtfk slkdllassg nssplrertg
      181 lsfsavkslv lrdkedklas gfdddarvla lihslfdadg nflqrnlisd sntstttisl
      241 prdihgappp sfvvklsevi gsfrtlrkma lfwcrvviel rrfwseeryl pgipvdetpd
      301 lnscllyqql qvincclsrk rrrsiatesf dsemeearsn veesdvaigt lapssalyar
      361 vssgelvlrq ganqlaenlt mletgepiys pitqegpllt edliketeel vlrtgsvgag
      421 csqllsdmqa fkaanpgcil edfvrwhspp dwtdternde vnssvsrgql ssrmqkegnl
      481 wrelwdtakp vpaikqtplf dedlavegil nflediptse lfqqlfvsll slgfalaeek
      541 vsadenlskl fyeckdyvvs tcqrslwddk mddlcqvyet vekmvatpee vmktmkqaee
      601 tptmengnaa gelkrrfkkl slnfggkdkq qqrnsppkdq nnsdesssrs fasffdskss
      661 lfsklspkse nlsvieklrs leesdwtlv
//
LOCUS       XP_040942946             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942946
VERSION     XP_040942946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087012.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15563
     CDS             1..139
                     /gene="LOC107922640"
                     /coded_by="XM_041087012.1:107..526"
                     /db_xref="GeneID:107922640"
ORIGIN      
        1 mrwarcdgmk pksqadpnpa nclflrvgtn yptllssssp nlahrfsaqd ckskfsilsi
       61 amsclhcysp flplnsqlkh kqklkakryl rlfstesapn qvlqtrnvns rtnatsnplf
      121 iaakvppsqs vhyfwlfts
//
LOCUS       XP_016708256             182 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708256
VERSION     XP_016708256.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852767.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=20288
     CDS             1..182
                     /gene="LOC107922640"
                     /coded_by="XM_016852767.2:162..710"
                     /db_xref="GeneID:107922640"
ORIGIN      
        1 mrwarcdgmk pksqadpnpa nclflrvgtn yptllssssp nlahrfsaqd ckskfsilsi
       61 amsclhcysp flplnsqlkh kqklkakryl rlfstesapn qvlqtrnvns rtnatsnplf
      121 iaakvppsqs gditvflets alllvvyfla nfvapyfisk yfefdkiged qkgsenndnk
      181 gr
//
LOCUS       XP_016706637             174 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich protein 23 [Gossypium hirsutum].
ACCESSION   XP_016706637
VERSION     XP_016706637.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851148.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706637.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..174
                     /product="glycine-rich protein 23"
                     /calculated_mol_wt=15340
     CDS             1..174
                     /gene="LOC107921275"
                     /coded_by="XM_016851148.2:28..552"
                     /db_xref="GeneID:107921275"
ORIGIN      
        1 masiifflly ksfflppvli kvilfkcyld lpkmtasfsf kvllvlflga lvcatsarkl
       61 tggfeeeknl fhrrprfggg lgggggggfg gggggglggg agfgggagag ggvggggglg
      121 ggggggfggg ggggvgggag ggfgggaggg ggfgggggfg ggagaggglg gglp
//
LOCUS       XP_016707132             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707132
VERSION     XP_016707132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13640
     CDS             1..124
                     /gene="LOC107921797"
                     /coded_by="XM_016851643.2:61..435"
                     /db_xref="GeneID:107921797"
ORIGIN      
        1 mhlflsllll semtllfalv fsssklreli tmmldkiveg kggaislpvl atltvvfism
       61 vydakgiwte dvvlnaadev lmvnlvlkat lmgfalylal itygfhkyik gsrpweaaee
      121 kksi
//
LOCUS       XP_016707185             140 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707185
VERSION     XP_016707185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851696.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..140
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15357
     CDS             1..140
                     /gene="LOC107921862"
                     /coded_by="XM_016851696.2:338..760"
                     /db_xref="GeneID:107921862"
ORIGIN      
        1 myllsmlvla etvlvlglif ssplrelvmr ildiitvgka dlilktvaat lllvftsmly
       61 dvieikkcwl egavpnpade ilmakqvlka smwfalflal atyglhycik glegsrtlea
      121 aednkqlmle ppknnatssk
//
LOCUS       XP_016707534             512 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase [Gossypium hirsutum].
ACCESSION   XP_016707534
VERSION     XP_016707534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="aspartic proteinase"
                     /calculated_mol_wt=55768
     Region          78..510
                     /region_name="phytepsin"
                     /note="Phytepsin, a plant homolog of mammalian lysosomal
                     pepsins; cd06098"
                     /db_xref="CDD:133162"
     Site            order(84,87..89,91,168..169,185,191,230,239..244,248)
                     /site_type="active"
                     /note="propeptide binding site [active]"
                     /db_xref="CDD:133162"
     Site            order(106..109,293..296)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133162"
     Site            order(106,293)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133162"
     Site            147..157
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133162"
     Region          321..354
                     /region_name="SapB_2"
                     /note="Saposin-like type B, region 2; pfam03489"
                     /db_xref="CDD:460945"
     Region          384..421
                     /region_name="SapB_1"
                     /note="Saposin-like type B, region 1; pfam05184"
                     /db_xref="CDD:461575"
     CDS             1..512
                     /gene="LOC107922162"
                     /coded_by="XM_016852045.2:174..1712"
                     /db_xref="GeneID:107922162"
ORIGIN      
        1 mgtivqttvv tvflcllfpi vfstsndglf riglkkrkfd rnnllaaqld skegealrgs
       61 frkylhgnlq eskdidival knymdaqyfg eigigtppqn ftvifdtgss nlwvpsskcy
      121 fsiacyfhsr yksshsstyn angkpadiky gtgqisgffs edhvtvgdlv vknqefieat
      181 sepsltflla kfdgilglgf qeisvgnavp vwynmvnqgl vkepvfsfwl srnsednlgg
      241 elvfggmdtk hfkgnhtyvp vtqkgywqfd mgdflignet tgfcaggcsa iadsgtslla
      301 gptgiitqin haigasgvvs qeckavvsey gekildmlla kdepkkicsq iglclfdgtq
      361 gvsmriesiv nenagkasgs lrdamcstce maviwmqnql kqnqtqdhii dyvnelcdrl
      421 pspmgessid ckslssmpsv sftiagklfe lrpeqyvmkv gegdgaqcis gftaldvppp
      481 rgplwilgdv fmgqfhtvfd ygnmqigfae aa
//
LOCUS       XP_016707537             512 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase [Gossypium hirsutum].
ACCESSION   XP_016707537
VERSION     XP_016707537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="aspartic proteinase"
                     /calculated_mol_wt=55768
     Region          78..510
                     /region_name="phytepsin"
                     /note="Phytepsin, a plant homolog of mammalian lysosomal
                     pepsins; cd06098"
                     /db_xref="CDD:133162"
     Site            order(84,87..89,91,168..169,185,191,230,239..244,248)
                     /site_type="active"
                     /note="propeptide binding site [active]"
                     /db_xref="CDD:133162"
     Site            order(106..109,293..296)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133162"
     Site            order(106,293)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133162"
     Site            147..157
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133162"
     Region          321..354
                     /region_name="SapB_2"
                     /note="Saposin-like type B, region 2; pfam03489"
                     /db_xref="CDD:460945"
     Region          384..421
                     /region_name="SapB_1"
                     /note="Saposin-like type B, region 1; pfam05184"
                     /db_xref="CDD:461575"
     CDS             1..512
                     /gene="LOC107922162"
                     /coded_by="XM_016852048.2:326..1864"
                     /db_xref="GeneID:107922162"
ORIGIN      
        1 mgtivqttvv tvflcllfpi vfstsndglf riglkkrkfd rnnllaaqld skegealrgs
       61 frkylhgnlq eskdidival knymdaqyfg eigigtppqn ftvifdtgss nlwvpsskcy
      121 fsiacyfhsr yksshsstyn angkpadiky gtgqisgffs edhvtvgdlv vknqefieat
      181 sepsltflla kfdgilglgf qeisvgnavp vwynmvnqgl vkepvfsfwl srnsednlgg
      241 elvfggmdtk hfkgnhtyvp vtqkgywqfd mgdflignet tgfcaggcsa iadsgtslla
      301 gptgiitqin haigasgvvs qeckavvsey gekildmlla kdepkkicsq iglclfdgtq
      361 gvsmriesiv nenagkasgs lrdamcstce maviwmqnql kqnqtqdhii dyvnelcdrl
      421 pspmgessid ckslssmpsv sftiagklfe lrpeqyvmkv gegdgaqcis gftaldvppp
      481 rgplwilgdv fmgqfhtvfd ygnmqigfae aa
//
LOCUS       XP_016707536             512 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase [Gossypium hirsutum].
ACCESSION   XP_016707536
VERSION     XP_016707536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="aspartic proteinase"
                     /calculated_mol_wt=55768
     Region          78..510
                     /region_name="phytepsin"
                     /note="Phytepsin, a plant homolog of mammalian lysosomal
                     pepsins; cd06098"
                     /db_xref="CDD:133162"
     Site            order(84,87..89,91,168..169,185,191,230,239..244,248)
                     /site_type="active"
                     /note="propeptide binding site [active]"
                     /db_xref="CDD:133162"
     Site            order(106..109,293..296)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133162"
     Site            order(106,293)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133162"
     Site            147..157
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133162"
     Region          321..354
                     /region_name="SapB_2"
                     /note="Saposin-like type B, region 2; pfam03489"
                     /db_xref="CDD:460945"
     Region          384..421
                     /region_name="SapB_1"
                     /note="Saposin-like type B, region 1; pfam05184"
                     /db_xref="CDD:461575"
     CDS             1..512
                     /gene="LOC107922162"
                     /coded_by="XM_016852047.2:119..1657"
                     /db_xref="GeneID:107922162"
ORIGIN      
        1 mgtivqttvv tvflcllfpi vfstsndglf riglkkrkfd rnnllaaqld skegealrgs
       61 frkylhgnlq eskdidival knymdaqyfg eigigtppqn ftvifdtgss nlwvpsskcy
      121 fsiacyfhsr yksshsstyn angkpadiky gtgqisgffs edhvtvgdlv vknqefieat
      181 sepsltflla kfdgilglgf qeisvgnavp vwynmvnqgl vkepvfsfwl srnsednlgg
      241 elvfggmdtk hfkgnhtyvp vtqkgywqfd mgdflignet tgfcaggcsa iadsgtslla
      301 gptgiitqin haigasgvvs qeckavvsey gekildmlla kdepkkicsq iglclfdgtq
      361 gvsmriesiv nenagkasgs lrdamcstce maviwmqnql kqnqtqdhii dyvnelcdrl
      421 pspmgessid ckslssmpsv sftiagklfe lrpeqyvmkv gegdgaqcis gftaldvppp
      481 rgplwilgdv fmgqfhtvfd ygnmqigfae aa
//
LOCUS       XP_016707778             928 aa            linear   PLN 06-AUG-2024
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707778
VERSION     XP_016707778.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852289.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707778.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..928
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X1"
                     /calculated_mol_wt=104175
     CDS             1..928
                     /gene="LOC107922310"
                     /coded_by="XM_016852289.2:144..2930"
                     /db_xref="GeneID:107922310"
ORIGIN      
        1 mefrprnyva eeqshslprs radihpfsss spqpilrqvd dneenrnnee ffdplrapds
       61 kasvetvdgh dfesssngnd dsfpvqtkew tsfkrflmqr fpvskmisvs stfffsqmsn
      121 tivrsgkahe kssssthlee lddpqkfsem dtkvitqqey vsrlhelkde inrawhsedr
      181 vkslklsikv srllmdtsvs nfyptlfvlv tdvlnmlgdm vwerirqkae faedgarlcs
      241 lraenfrasd vpidaketcy nwfckvgsir ellpriylel aifpcwrfli eqpaeslqrl
      301 vmmtrgigdp lasaycrlyi ahhaqklpsh dtgylitcln ditliftris stkesahgcf
      361 adskrslisl mepsvefimk cilndasqrr agkvlvelgl grsqeelfgg spcvsivlhh
      421 llkelpidiv sfhavdilhl ikcsndnsyd qclnyrlvgl rlseqisqig sveavvnevi
      481 qvvseyglde ylkvvdayld ivlqnqmddh lktilegisk lasdkvlaed elaslqsilv
      541 kllshfkdle hvfslnhflq ildmmhgnsr givnmhildm atrngyvhdp ttiqllfeis
      601 qalhsdtdlv nmknddnqqq arlisrfvrm vdhgveyerh laflmecrga lgsiielkei
      661 lvhssnclat kalkdgkkht afvktciafs eitipsipgh ikqlnlylgt aevallgglv
      721 shsdglidsa inclqssdwm egsrtldsdg mlssirklcs llimvpgnpe vgilhipksi
      781 lliihsrsws prlkarilca iislsatlsq erlpyhadhp eimgndllff gdssyvrell
      841 sltesvlqnl vdvieqepsr aargslslea cnciassfki nehvlsvclk lietaklcln
      901 akdkyltsti sfldknlpaa avsssiai
//
LOCUS       XP_016707779             927 aa            linear   PLN 06-AUG-2024
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707779
VERSION     XP_016707779.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707779.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X2"
                     /calculated_mol_wt=104104
     CDS             1..927
                     /gene="LOC107922310"
                     /coded_by="XM_016852290.2:144..2927"
                     /db_xref="GeneID:107922310"
ORIGIN      
        1 mefrprnyva eeqshslprs radihpfsss spqpilrqvd dneenrnnee ffdplrapds
       61 kasvetvdgh dfesssngnd dsfpvqtkew tsfkrflmqr fpvskmisvs stfffsqmsn
      121 tivrsgkahe kssssthlee lddpqkfsem dtkvitqqey vsrlhelkde inrawhsedr
      181 vkslklsikv srllmdtsvs nfyptlfvlv tdvlnmlgdm vwerirqkae faedgarlcs
      241 lrenfrasdv pidaketcyn wfckvgsire llpriylela ifpcwrflie qpaeslqrlv
      301 mmtrgigdpl asaycrlyia hhaqklpshd tgylitclnd itliftriss tkesahgcfa
      361 dskrslislm epsvefimkc ilndasqrra gkvlvelglg rsqeelfggs pcvsivlhhl
      421 lkelpidivs fhavdilhli kcsndnsydq clnyrlvglr lseqisqigs veavvneviq
      481 vvseygldey lkvvdayldi vlqnqmddhl ktilegiskl asdkvlaede laslqsilvk
      541 llshfkdleh vfslnhflqi ldmmhgnsrg ivnmhildma trngyvhdpt tiqllfeisq
      601 alhsdtdlvn mknddnqqqa rlisrfvrmv dhgveyerhl aflmecrgal gsiielkeil
      661 vhssnclatk alkdgkkhta fvktciafse itipsipghi kqlnlylgta evallgglvs
      721 hsdglidsai nclqssdwme gsrtldsdgm lssirklcsl limvpgnpev gilhipksil
      781 liihsrswsp rlkarilcai islsatlsqe rlpyhadhpe imgndllffg dssyvrells
      841 ltesvlqnlv dvieqepsra argslsleac nciassfkin ehvlsvclkl ietaklclna
      901 kdkyltstis fldknlpaaa vsssiai
//
LOCUS       XP_016707780             922 aa            linear   PLN 06-AUG-2024
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707780
VERSION     XP_016707780.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852291.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..922
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X3"
                     /calculated_mol_wt=103417
     CDS             1..922
                     /gene="LOC107922310"
                     /coded_by="XM_016852291.2:89..2857"
                     /db_xref="GeneID:107922310"
ORIGIN      
        1 mefrprnyva eeqshslprs radihpfsss spqpilrqvd dneenrnnee ffdplrapds
       61 kasvetvdgh dfesssngnd dsfpvqtkew tsfkrflmqr fpvskmisvs smsntivrsg
      121 kaheksssst hleelddpqk fsemdtkvit qqeyvsrlhe lkdeinrawh sedrvkslkl
      181 sikvsrllmd tsvsnfyptl fvlvtdvlnm lgdmvwerir qkaefaedga rlcslraenf
      241 rasdvpidak etcynwfckv gsirellpri ylelaifpcw rflieqpaes lqrlvmmtrg
      301 igdplasayc rlyiahhaqk lpshdtgyli tclnditlif trisstkesa hgcfadskrs
      361 lislmepsve fimkcilnda sqrragkvlv elglgrsqee lfggspcvsi vlhhllkelp
      421 idivsfhavd ilhlikcsnd nsydqclnyr lvglrlseqi sqigsveavv neviqvvsey
      481 gldeylkvvd ayldivlqnq mddhlktile gisklasdkv laedelaslq silvkllshf
      541 kdlehvfsln hflqildmmh gnsrgivnmh ildmatrngy vhdpttiqll feisqalhsd
      601 tdlvnmkndd nqqqarlisr fvrmvdhgve yerhlaflme crgalgsiie lkeilvhssn
      661 clatkalkdg kkhtafvktc iafseitips ipghikqlnl ylgtaevall gglvshsdgl
      721 idsainclqs sdwmegsrtl dsdgmlssir klcsllimvp gnpevgilhi pksilliihs
      781 rswsprlkar ilcaiislsa tlsqerlpyh adhpeimgnd llffgdssyv rellsltesv
      841 lqnlvdvieq epsraargsl sleacncias sfkinehvls vclklietak lclnakdkyl
      901 tstisfldkn lpaaavsssi ai
//
LOCUS       XP_016707781             921 aa            linear   PLN 06-AUG-2024
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016707781
VERSION     XP_016707781.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707781.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..921
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X4"
                     /calculated_mol_wt=103346
     CDS             1..921
                     /gene="LOC107922310"
                     /coded_by="XM_016852292.2:89..2854"
                     /db_xref="GeneID:107922310"
ORIGIN      
        1 mefrprnyva eeqshslprs radihpfsss spqpilrqvd dneenrnnee ffdplrapds
       61 kasvetvdgh dfesssngnd dsfpvqtkew tsfkrflmqr fpvskmisvs smsntivrsg
      121 kaheksssst hleelddpqk fsemdtkvit qqeyvsrlhe lkdeinrawh sedrvkslkl
      181 sikvsrllmd tsvsnfyptl fvlvtdvlnm lgdmvwerir qkaefaedga rlcslrenfr
      241 asdvpidake tcynwfckvg sirellpriy lelaifpcwr flieqpaesl qrlvmmtrgi
      301 gdplasaycr lyiahhaqkl pshdtgylit clnditlift risstkesah gcfadskrsl
      361 islmepsvef imkcilndas qrragkvlve lglgrsqeel fggspcvsiv lhhllkelpi
      421 divsfhavdi lhlikcsndn sydqclnyrl vglrlseqis qigsveavvn eviqvvseyg
      481 ldeylkvvda yldivlqnqm ddhlktileg isklasdkvl aedelaslqs ilvkllshfk
      541 dlehvfslnh flqildmmhg nsrgivnmhi ldmatrngyv hdpttiqllf eisqalhsdt
      601 dlvnmknddn qqqarlisrf vrmvdhgvey erhlaflmec rgalgsiiel keilvhssnc
      661 latkalkdgk khtafvktci afseitipsi pghikqlnly lgtaevallg glvshsdgli
      721 dsainclqss dwmegsrtld sdgmlssirk lcsllimvpg npevgilhip ksilliihsr
      781 swsprlkari lcaiislsat lsqerlpyha dhpeimgndl lffgdssyvr ellsltesvl
      841 qnlvdvieqe psraargsls leacnciass fkinehvlsv clklietakl clnakdkylt
      901 stisfldknl paaavsssia i
//
LOCUS       XP_040942948             746 aa            linear   PLN 06-AUG-2024
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040942948
VERSION     XP_040942948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087014.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..746
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X5"
                     /calculated_mol_wt=84447
     CDS             1..746
                     /gene="LOC107922310"
                     /coded_by="XM_041087014.1:144..2384"
                     /db_xref="GeneID:107922310"
ORIGIN      
        1 mefrprnyva eeqshslprs radihpfsss spqpilrqvd dneenrnnee ffdplrapds
       61 kasvetvdgh dfesssngnd dsfpvqtkew tsfkrflmqr fpvskmisvs stfffsqmsn
      121 tivrsgkahe kssssthlee lddpqkfsem dtkvitqqey vsrlhelkde inrawhsedr
      181 vkslklsikv srllmdtsvs nfyptlfvlv tdvlnmlgdm vwerirqkae faedgarlcs
      241 lraenfrasd vpidaketcy nwfckvgsir ellpriylel aifpcwrfli eqpaeslqrl
      301 vmmtrgigdp lasaycrlyi ahhaqklpsh dtgylitcln ditliftris stkesahgcf
      361 adskrslisl mepsvefimk cilndasqrr agkvlvelgl grsqeelfgg spcvsivlhh
      421 llkelpidiv sfhavdilhl ikcsndnsyd qclnyrlvgl rlseqisqig sveavvnevi
      481 qvvseyglde ylkvvdayld ivlqnqmddh lktilegisk lasdkvlaed elaslqsilv
      541 kllshfkdle hvfslnhflq ildmmhgnsr givnmhildm atrngyvhdp ttiqllfeis
      601 qalhsdtdlv nmknddnqqq arlisrfvrm vdhgveyerh laflmecrga lgsiielkei
      661 lvhssnclat kalkdgkkht afvktciafs eitipsipgh ikqlnlylgt aevallgglv
      721 shsdglidsa inclqssdwm eekqkk
//
LOCUS       XP_016707171             150 aa            linear   PLN 06-AUG-2024
DEFINITION  stigma-specific STIG1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707171
VERSION     XP_016707171.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851682.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="stigma-specific STIG1-like protein 1"
                     /calculated_mol_wt=16457
     Region          11..150
                     /region_name="Stig1"
                     /note="Stigma-specific protein, Stig1; pfam04885"
                     /db_xref="CDD:461466"
     CDS             1..150
                     /gene="LOC107921847"
                     /coded_by="XM_016851682.2:107..559"
                     /db_xref="GeneID:107921847"
ORIGIN      
        1 meaakifvty avtialamkt igavaednsl iplttfrdag ppvlpmgspk rvsrflqqgy
       61 rnpraadhch kdeevcyvle gatstccnnk cvflatdnhn cgackrkckf tqvccrgecv
      121 eiafdkrhcg acnhrcnrge ycvygmcnya
//
LOCUS       XP_040942949             167 aa            linear   PLN 06-AUG-2024
DEFINITION  3beta-hydroxysteroid-dehydrogenase/decarboxylase [Gossypium
            hirsutum].
ACCESSION   XP_040942949
VERSION     XP_040942949.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087015.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="3beta-hydroxysteroid-
                     dehydrogenase/decarboxylase"
                     /calculated_mol_wt=18160
     Region          1..>164
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(57,85,112,116)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..167
                     /gene="LOC107921729"
                     /coded_by="XM_041087015.1:16..519"
                     /db_xref="GeneID:107921729"
ORIGIN      
        1 mcssqiisva lgysrdpenl arvsvhklhv ttgadvvfym eptdldthdf sncymiivqa
       61 iisgaknvin acqeskvkrl vyyssadvfy gsqdilngde sfaypgkskd mtvdlkfeae
      121 glirlankig glqtcvlcls dvfgsgetqf vpllvnlakf glakily
//
LOCUS       XP_040942950             454 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-1,3-arabinosyltransferase XAT3 [Gossypium hirsutum].
ACCESSION   XP_040942950
VERSION     XP_040942950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087016.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..454
                     /product="alpha-1,3-arabinosyltransferase XAT3"
                     /calculated_mol_wt=51737
     Region          <287..443
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..454
                     /gene="LOC107920969"
                     /coded_by="XM_041087016.1:130..1494"
                     /db_xref="GeneID:107920969"
ORIGIN      
        1 mmekesrrlv ncatlpiclv lislvyatff hsndtilesw gnlssekini davdpqefll
       61 rrlvrgddrv qldsngfscr advhaqvcva nkpvriynkg ltvyvpsdsd qpqvkrivkp
      121 yarledetam krvspvqilh gkntidppac nfthnvtavv fsskgftgnv fhefneiiip
      181 lfittrhfrs rvrfvitdfe lwwvqkynrc lshlsayevi npgtddgsvh cfpgaviglt
      241 yhdnlalnsi dipggysmfd fkqflkesyn lkinhvseiq kpmlmlisrr ktrrflnedk
      301 mvemimelgf qitrvepewm ynldefaevv nscsvmlgah gagltneifl ptgavmvqvv
      361 plqnewvatt yyggpakemg vryleykiep eesslfdtyg kdhpvftdpk siiskgynaf
      421 rsvyldqdlk inlerfkktl ieakqivess tpin
//
LOCUS       XP_016706293             454 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-1,3-arabinosyltransferase XAT3 [Gossypium hirsutum].
ACCESSION   XP_016706293
VERSION     XP_016706293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850804.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..454
                     /product="alpha-1,3-arabinosyltransferase XAT3"
                     /calculated_mol_wt=51737
     Region          <287..443
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..454
                     /gene="LOC107920969"
                     /coded_by="XM_016850804.2:54..1418"
                     /db_xref="GeneID:107920969"
ORIGIN      
        1 mmekesrrlv ncatlpiclv lislvyatff hsndtilesw gnlssekini davdpqefll
       61 rrlvrgddrv qldsngfscr advhaqvcva nkpvriynkg ltvyvpsdsd qpqvkrivkp
      121 yarledetam krvspvqilh gkntidppac nfthnvtavv fsskgftgnv fhefneiiip
      181 lfittrhfrs rvrfvitdfe lwwvqkynrc lshlsayevi npgtddgsvh cfpgaviglt
      241 yhdnlalnsi dipggysmfd fkqflkesyn lkinhvseiq kpmlmlisrr ktrrflnedk
      301 mvemimelgf qitrvepewm ynldefaevv nscsvmlgah gagltneifl ptgavmvqvv
      361 plqnewvatt yyggpakemg vryleykiep eesslfdtyg kdhpvftdpk siiskgynaf
      421 rsvyldqdlk inlerfkktl ieakqivess tpin
//
LOCUS       XP_016706628             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706628
VERSION     XP_016706628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..193
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20920
     Region          156..187
                     /region_name="DUF761"
                     /note="Cotton fibre expressed protein; pfam05553"
                     /db_xref="CDD:461675"
     CDS             1..193
                     /gene="LOC107921266"
                     /coded_by="XM_016851139.2:196..777"
                     /db_xref="GeneID:107921266"
ORIGIN      
        1 mnkfkksqil tlsivaalll iapllssslr ptylyfilnl liislgaeag lglvfsrpsy
       61 aaarpdttqe vkgsvestdv aaptastekk gnkvvgksvs ekkiivgsik vdkvkkcpst
      121 pslffigsge teaeavnree lemeeeeegd vgglsgpelf tkaeifignf ykqlkmqree
      181 swkkihgsyq kaf
//
LOCUS       XP_040942951             450 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-L-galactose phosphorylase 1 [Gossypium hirsutum].
ACCESSION   XP_040942951
VERSION     XP_040942951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087017.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="GDP-L-galactose phosphorylase 1"
                     /calculated_mol_wt=50415
     Region          2..401
                     /region_name="PLN03103"
                     /note="GDP-L-galactose-hexose-1-phosphate
                     guanyltransferase; Provisional"
                     /db_xref="CDD:215577"
     CDS             1..450
                     /gene="LOC107921993"
                     /coded_by="XM_041087017.1:1146..2498"
                     /db_xref="GeneID:107921993"
ORIGIN      
        1 mmlrikrvpt vvsnyqkdet eetarrssgc gknclrscci pgaklplyaf rklnniesek
       61 vvlgienkdp pvafldslil gewedrmqrg lfrydvtace tkvipgeygf iaqlnegrhl
      121 kkrptefrvd kvlqpfdgnk fnftkvgqee vlfqfeased gevqfypsap idvenspsvv
      181 ainvspieyg hvlliprile clpqridres fllalymtae agnpyfrlgy nslgafatin
      241 hlhfqayyla vpfpiekapt kkittlydev iisellsypv rglvfeggnt lqalsdtvsd
      301 aciclqenni pynvlisdcg kriflvpqcy aekqalgevs pelldtqvnp avweisghmv
      361 lkrrkdydea sdenawrlla evslsderfr evnalifevi asgkdgieha akslpkepdt
      421 kaesteeesa itktshramv ggtqecvvlq
//
LOCUS       XP_040942952             450 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-L-galactose phosphorylase 1 [Gossypium hirsutum].
ACCESSION   XP_040942952
VERSION     XP_040942952.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087018.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="GDP-L-galactose phosphorylase 1"
                     /calculated_mol_wt=50415
     Region          2..401
                     /region_name="PLN03103"
                     /note="GDP-L-galactose-hexose-1-phosphate
                     guanyltransferase; Provisional"
                     /db_xref="CDD:215577"
     CDS             1..450
                     /gene="LOC107921993"
                     /coded_by="XM_041087018.1:1182..2534"
                     /db_xref="GeneID:107921993"
ORIGIN      
        1 mmlrikrvpt vvsnyqkdet eetarrssgc gknclrscci pgaklplyaf rklnniesek
       61 vvlgienkdp pvafldslil gewedrmqrg lfrydvtace tkvipgeygf iaqlnegrhl
      121 kkrptefrvd kvlqpfdgnk fnftkvgqee vlfqfeased gevqfypsap idvenspsvv
      181 ainvspieyg hvlliprile clpqridres fllalymtae agnpyfrlgy nslgafatin
      241 hlhfqayyla vpfpiekapt kkittlydev iisellsypv rglvfeggnt lqalsdtvsd
      301 aciclqenni pynvlisdcg kriflvpqcy aekqalgevs pelldtqvnp avweisghmv
      361 lkrrkdydea sdenawrlla evslsderfr evnalifevi asgkdgieha akslpkepdt
      421 kaesteeesa itktshramv ggtqecvvlq
//
LOCUS       XP_040942953             450 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-L-galactose phosphorylase 1 [Gossypium hirsutum].
ACCESSION   XP_040942953
VERSION     XP_040942953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087019.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="GDP-L-galactose phosphorylase 1"
                     /calculated_mol_wt=50415
     Region          2..401
                     /region_name="PLN03103"
                     /note="GDP-L-galactose-hexose-1-phosphate
                     guanyltransferase; Provisional"
                     /db_xref="CDD:215577"
     CDS             1..450
                     /gene="LOC107921993"
                     /coded_by="XM_041087019.1:1307..2659"
                     /db_xref="GeneID:107921993"
ORIGIN      
        1 mmlrikrvpt vvsnyqkdet eetarrssgc gknclrscci pgaklplyaf rklnniesek
       61 vvlgienkdp pvafldslil gewedrmqrg lfrydvtace tkvipgeygf iaqlnegrhl
      121 kkrptefrvd kvlqpfdgnk fnftkvgqee vlfqfeased gevqfypsap idvenspsvv
      181 ainvspieyg hvlliprile clpqridres fllalymtae agnpyfrlgy nslgafatin
      241 hlhfqayyla vpfpiekapt kkittlydev iisellsypv rglvfeggnt lqalsdtvsd
      301 aciclqenni pynvlisdcg kriflvpqcy aekqalgevs pelldtqvnp avweisghmv
      361 lkrrkdydea sdenawrlla evslsderfr evnalifevi asgkdgieha akslpkepdt
      421 kaesteeesa itktshramv ggtqecvvlq
//
LOCUS       XP_040942954             450 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-L-galactose phosphorylase 1 [Gossypium hirsutum].
ACCESSION   XP_040942954
VERSION     XP_040942954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087020.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="GDP-L-galactose phosphorylase 1"
                     /calculated_mol_wt=50415
     Region          2..401
                     /region_name="PLN03103"
                     /note="GDP-L-galactose-hexose-1-phosphate
                     guanyltransferase; Provisional"
                     /db_xref="CDD:215577"
     CDS             1..450
                     /gene="LOC107921993"
                     /coded_by="XM_041087020.1:1346..2698"
                     /db_xref="GeneID:107921993"
ORIGIN      
        1 mmlrikrvpt vvsnyqkdet eetarrssgc gknclrscci pgaklplyaf rklnniesek
       61 vvlgienkdp pvafldslil gewedrmqrg lfrydvtace tkvipgeygf iaqlnegrhl
      121 kkrptefrvd kvlqpfdgnk fnftkvgqee vlfqfeased gevqfypsap idvenspsvv
      181 ainvspieyg hvlliprile clpqridres fllalymtae agnpyfrlgy nslgafatin
      241 hlhfqayyla vpfpiekapt kkittlydev iisellsypv rglvfeggnt lqalsdtvsd
      301 aciclqenni pynvlisdcg kriflvpqcy aekqalgevs pelldtqvnp avweisghmv
      361 lkrrkdydea sdenawrlla evslsderfr evnalifevi asgkdgieha akslpkepdt
      421 kaesteeesa itktshramv ggtqecvvlq
//
LOCUS       XP_016706507             215 aa            linear   PLN 06-AUG-2024
DEFINITION  stigma-specific STIG1-like protein 4 [Gossypium hirsutum].
ACCESSION   XP_016706507
VERSION     XP_016706507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851018.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="stigma-specific STIG1-like protein 4"
                     /calculated_mol_wt=23814
     Region          <42..144
                     /region_name="Stig1"
                     /note="Stigma-specific protein, Stig1; pfam04885"
                     /db_xref="CDD:461466"
     CDS             1..215
                     /gene="LOC107921144"
                     /coded_by="XM_016851018.2:407..1054"
                     /db_xref="GeneID:107921144"
ORIGIN      
        1 mewlaktlfl pfllqllvll pietaeanvk pkwvlqnett dgaspwlrna anprprpggc
       61 mfrpwiceqg ehpptarmrc crnrcvdlns ddahcglcal rcpftwqccr gvcintnisp
      121 lncgrcgnrc pfrvpcsfgm cgyaqprpfp prpprpfpph pprpipphpp rpfppphphr
      181 pqptpcpptq pgppprtcpp glpppltgdh spsrs
//
LOCUS       XP_016706255             470 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase 7 [Gossypium hirsutum].
ACCESSION   XP_016706255
VERSION     XP_016706255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850766.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="glucan endo-1,3-beta-glucosidase 7"
                     /calculated_mol_wt=50034
     Region          25..343
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          381..466
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..470
                     /gene="LOC107920932"
                     /coded_by="XM_016850766.2:192..1604"
                     /db_xref="GeneID:107920932"
ORIGIN      
        1 maslsffnfl ilflsaiavs dagsvginyg rvadnlpppd kvvqllksqg vakvkifdsd
       61 savltalans gisvvvclpn eqlasaandq sfsdgwvqan iakyypatki eaiaignevi
      121 aenitdttkf vvpamktiqa slvklkldsn ikvsspvais clgnsypasa gsfktnqvqs
      181 tiipmldflr etgsylmvnv ypffaykdns ktisldyslf kdnpgvvdsg nglrykslfe
      241 aqvdavyaam saltyddlkl vvtetgwpsa gdaaevgasq dnaaayngnl vrrvltgngt
      301 plrpndplnv yifalfnenq kpgptserny glfypneqrv yniplsqkgl ngnqsppasn
      361 vnqtapvnnw ggvskatsgq twcmaspnae aeelqegldy acgeggadcg piqpngacyn
      421 pnslvahasy aynsyyqkka rvsgscffsg tayvstqpps fgncqfptgy
//
LOCUS       XP_016706497             427 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706497
VERSION     XP_016706497.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851008.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706497.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..427
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48594
     Region          19..411
                     /region_name="DUF3537"
                     /note="Protein of unknown function (DUF3537); pfam12056"
                     /db_xref="CDD:463448"
     CDS             1..427
                     /gene="LOC107921139"
                     /coded_by="XM_016851008.2:91..1374"
                     /db_xref="GeneID:107921139"
ORIGIN      
        1 meplvertrl artishaqde lqsfrtylrw mcvdqsniwm gclswfmfiv fgllvplvsh
       61 fmlacstcda thtrpydwvv qlslssvsal sfvcltrfvk khglrrflfl dklcdesetv
      121 rkqytvqlnr slkivsffvl pcfiaetayk vwwyasgasq ipflgivwls dtvacvmelc
      181 swlyrttvff lvcvlfrlic nlqvlrlhdf akvfnvdsdv gsvlrehlri rrqlriishr
      241 yrafivwcli lvtfsqftsl littksnsrl niykagelal csitlltglc illrsatkit
      301 hkaqsvtsla skwhvcatld sfdegetprt paihdqqvlp hvgangeseg ddpgeeddel
      361 dncklipaha ystisyhkrq alvtyfeknq ggitvygial drstlhtifg ielsfvlwil
      421 gktigis
//
LOCUS       XP_040942955             545 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942955
VERSION     XP_040942955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087021.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="EH domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=61254
     Region          19..85
                     /region_name="EH"
                     /note="Eps15 homology domain; found in proteins implicated
                     in endocytosis, vesicle transport, and signal
                     transduction. The alignment contains a pair of EF-hand
                     motifs, typically one of them is canonical and binds to
                     Ca2+, while the other may not bind to Ca2+. A...; cd00052"
                     /db_xref="CDD:238009"
     Site            order(25..27,34..38)
                     /site_type="active"
                     /note="pseudo EF-hand loop [active]"
                     /db_xref="CDD:238009"
     Site            order(43,53,57)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:238009"
     Site            order(61,63,65,72)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238009"
     Region          163..195
                     /region_name="EHD_N"
                     /note="N-terminal EH-domain containing protein; pfam16880"
                     /db_xref="CDD:465295"
     Region          199..443
                     /region_name="EHD"
                     /note="Eps15 homology domain (EHD), C-terminal domain;
                     cd09913"
                     /db_xref="CDD:206740"
     Site            204..211
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206740"
     Site            order(209..212,292,359,361,395..397)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206740"
     Site            233
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206740"
     Site            237..239
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206740"
     Site            292..295
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206740"
     Site            order(294..295,322..323)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206740"
     Site            358..361
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206740"
     Site            395..397
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206740"
     Region          435..537
                     /region_name="DUF5600"
                     /note="Domain of unknown function (DUF5600); pfam18150"
                     /db_xref="CDD:465667"
     CDS             1..545
                     /gene="LOC107922087"
                     /coded_by="XM_041087021.1:129..1766"
                     /db_xref="GeneID:107922087"
ORIGIN      
        1 meigtgrigs cskehqkiyq ewfnfadsdn dgritgndai kffgmsnlsr pdlkqvwata
       61 dskrqgflgf kefvfamqlv slaqeghqis hdllngdvdf enikppvmeg ldalimrkkq
      121 sskssslesn gsssnqtspa sqwfsskssk kislssvtsi idglkrlylq klkplevtyh
      181 fndfvspllt nsdfdakpmv mllgqystgk ttfikhllkt sypgahigpe pttdrfvvvm
      241 sgtdersvpg ntiavqadmp fsglttfgta flskfecsqm phpllehvtf vdtpgvlsge
      301 kqrtqraydf tgvtswfaak cdlilllfdp hkldvsdefk rviyslrghd dkirvvlnka
      361 dqvdtqqlmr vygalmwslg kvlntpevvr vyigsfndkp vneaatgpig kelfekeqed
      421 llsdlkdipk kacdrrinef vkraraakih ayiiahlkke mpamigkakt qqrlidnleg
      481 efgkvqrdhh lppgdfpnve hfkeilsgyn fdkfeklkpk miqavddmlg ydipellktf
      541 rnpyd
//
LOCUS       XP_040942956             545 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942956
VERSION     XP_040942956.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087022.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="EH domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=61254
     Region          19..85
                     /region_name="EH"
                     /note="Eps15 homology domain; found in proteins implicated
                     in endocytosis, vesicle transport, and signal
                     transduction. The alignment contains a pair of EF-hand
                     motifs, typically one of them is canonical and binds to
                     Ca2+, while the other may not bind to Ca2+. A...; cd00052"
                     /db_xref="CDD:238009"
     Site            order(25..27,34..38)
                     /site_type="active"
                     /note="pseudo EF-hand loop [active]"
                     /db_xref="CDD:238009"
     Site            order(43,53,57)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:238009"
     Site            order(61,63,65,72)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238009"
     Region          163..195
                     /region_name="EHD_N"
                     /note="N-terminal EH-domain containing protein; pfam16880"
                     /db_xref="CDD:465295"
     Region          199..443
                     /region_name="EHD"
                     /note="Eps15 homology domain (EHD), C-terminal domain;
                     cd09913"
                     /db_xref="CDD:206740"
     Site            204..211
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206740"
     Site            order(209..212,292,359,361,395..397)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206740"
     Site            233
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206740"
     Site            237..239
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206740"
     Site            292..295
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206740"
     Site            order(294..295,322..323)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206740"
     Site            358..361
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206740"
     Site            395..397
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206740"
     Region          435..537
                     /region_name="DUF5600"
                     /note="Domain of unknown function (DUF5600); pfam18150"
                     /db_xref="CDD:465667"
     CDS             1..545
                     /gene="LOC107922087"
                     /coded_by="XM_041087022.1:169..1806"
                     /db_xref="GeneID:107922087"
ORIGIN      
        1 meigtgrigs cskehqkiyq ewfnfadsdn dgritgndai kffgmsnlsr pdlkqvwata
       61 dskrqgflgf kefvfamqlv slaqeghqis hdllngdvdf enikppvmeg ldalimrkkq
      121 sskssslesn gsssnqtspa sqwfsskssk kislssvtsi idglkrlylq klkplevtyh
      181 fndfvspllt nsdfdakpmv mllgqystgk ttfikhllkt sypgahigpe pttdrfvvvm
      241 sgtdersvpg ntiavqadmp fsglttfgta flskfecsqm phpllehvtf vdtpgvlsge
      301 kqrtqraydf tgvtswfaak cdlilllfdp hkldvsdefk rviyslrghd dkirvvlnka
      361 dqvdtqqlmr vygalmwslg kvlntpevvr vyigsfndkp vneaatgpig kelfekeqed
      421 llsdlkdipk kacdrrinef vkraraakih ayiiahlkke mpamigkakt qqrlidnleg
      481 efgkvqrdhh lppgdfpnve hfkeilsgyn fdkfeklkpk miqavddmlg ydipellktf
      541 rnpyd
//
LOCUS       XP_040942957             544 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942957
VERSION     XP_040942957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087023.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..544
                     /product="EH domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=61155
     Region          19..85
                     /region_name="EH"
                     /note="Eps15 homology domain; found in proteins implicated
                     in endocytosis, vesicle transport, and signal
                     transduction. The alignment contains a pair of EF-hand
                     motifs, typically one of them is canonical and binds to
                     Ca2+, while the other may not bind to Ca2+. A...; cd00052"
                     /db_xref="CDD:238009"
     Site            order(25..27,34..38)
                     /site_type="active"
                     /note="pseudo EF-hand loop [active]"
                     /db_xref="CDD:238009"
     Site            order(43,53,57)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:238009"
     Site            order(61,63,65,72)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238009"
     Region          162..194
                     /region_name="EHD_N"
                     /note="N-terminal EH-domain containing protein; pfam16880"
                     /db_xref="CDD:465295"
     Region          198..442
                     /region_name="EHD"
                     /note="Eps15 homology domain (EHD), C-terminal domain;
                     cd09913"
                     /db_xref="CDD:206740"
     Site            203..210
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206740"
     Site            order(208..211,291,358,360,394..396)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206740"
     Site            232
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206740"
     Site            236..238
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206740"
     Site            291..294
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206740"
     Site            order(293..294,321..322)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206740"
     Site            357..360
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206740"
     Site            394..396
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206740"
     Region          434..536
                     /region_name="DUF5600"
                     /note="Domain of unknown function (DUF5600); pfam18150"
                     /db_xref="CDD:465667"
     CDS             1..544
                     /gene="LOC107922087"
                     /coded_by="XM_041087023.1:170..1804"
                     /db_xref="GeneID:107922087"
ORIGIN      
        1 meigtgrigs cskehqkiyq ewfnfadsdn dgritgndai kffgmsnlsr pdlkqvwata
       61 dskrqgflgf kefvfamqlv slaqeghqis hdllngddfe nikppvmegl dalimrkkqs
      121 skssslesng sssnqtspas qwfssksskk islssvtsii dglkrlylqk lkplevtyhf
      181 ndfvsplltn sdfdakpmvm llgqystgkt tfikhllkts ypgahigpep ttdrfvvvms
      241 gtdersvpgn tiavqadmpf sglttfgtaf lskfecsqmp hpllehvtfv dtpgvlsgek
      301 qrtqraydft gvtswfaakc dlilllfdph kldvsdefkr viyslrghdd kirvvlnkad
      361 qvdtqqlmrv ygalmwslgk vlntpevvrv yigsfndkpv neaatgpigk elfekeqedl
      421 lsdlkdipkk acdrrinefv kraraakiha yiiahlkkem pamigkaktq qrlidnlege
      481 fgkvqrdhhl ppgdfpnveh fkeilsgynf dkfeklkpkm iqavddmlgy dipellktfr
      541 npyd
//
LOCUS       XP_016707408             349 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At4g26790 [Gossypium hirsutum].
ACCESSION   XP_016707408
VERSION     XP_016707408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..349
                     /product="GDSL esterase/lipase At4g26790"
                     /calculated_mol_wt=39286
     Region          1..348
                     /region_name="Lipase_GDSL_3"
                     /note="GDSL-like Lipase/Acylhydrolase family; cl46856"
                     /db_xref="CDD:481196"
     CDS             1..349
                     /gene="LOC107922084"
                     /coded_by="XM_016851919.2:278..1327"
                     /db_xref="GeneID:107922084"
ORIGIN      
        1 maikvfsfff fvyllvemhe isamvpaviv fgdstvdpgn nnqistvlks nfapygrdyf
       61 ggqptgrfsn griatdfise aygikpaipa yldpkfdird fatgvsfasa gtgydkatsd
      121 vlsvipfwke mvyykefqdk lrgylgndia nhhlseslhl isigtndfle nyypfptrss
      181 vypvdkyeif ligiannfir elynlgarki aisglppmgc lplerttnim hgsacieeyn
      241 dvakdfnqkl qdsvtelnre lggiqlvmsn pyykllemiq npilfgfenv ataccgtgyf
      301 emsymcdrmn pftcsdanky ifwdsfhpte kanfiladha fkttltvfr
//
LOCUS       XP_016707409             275 aa            linear   PLN 06-AUG-2024
DEFINITION  grpE protein homolog 2, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016707409
VERSION     XP_016707409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..275
                     /product="grpE protein homolog 2, mitochondrial"
                     /calculated_mol_wt=30180
     Region          106..255
                     /region_name="GrpE"
                     /note="nucleotide exchange factor GrpE; cd00446"
                     /db_xref="CDD:271355"
     Region          106..156
                     /region_name="2-helical coiled coil"
                     /note="2-helical coiled coil [structural motif]"
                     /db_xref="CDD:271355"
     Site            order(108,111..112,115..116,118..119,122..124,126,
                     129..130,133..134,137..138,140..141,144..146,148..152,
                     154..155,185..186,188..190,193,199..200)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271355"
     Site            order(124,132,154,157,212,214..215,217..221,237,246,250,
                     252,255)
                     /site_type="other"
                     /note="Hsp70 (ATPase domain) interactions [polypeptide
                     binding]"
                     /db_xref="CDD:271355"
     Region          185..200
                     /region_name="2-helical coiled coil"
                     /note="2-helical coiled coil [structural motif]"
                     /db_xref="CDD:271355"
     CDS             1..275
                     /gene="LOC107922085"
                     /coded_by="XM_016851920.2:200..1027"
                     /db_xref="GeneID:107922085"
ORIGIN      
        1 mmcfcciiqa lislhsnkme slrlprrlsl qkgsmrilhk vmvkslqgev gggtnpggae
       61 vtdqtkesds ssdshsesdg dlsladmikl veekdgllee kqkeieqmke kivrtlaeme
      121 nvmartrrea dnskkfavqn fakdlldvad nlgrasahvk gsfskidesn dtagavplle
      181 tllegvemte kqlgevfrky gvkkfdptne pfdpnmhnav fqvpdnskpp gtvahvlkag
      241 ymlydrvirp aevsvtqapd pdadknntsn kdsda
//
LOCUS       XP_016707411             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707411
VERSION     XP_016707411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20368
     CDS             1..189
                     /gene="LOC107922086"
                     /coded_by="XM_016851922.2:200..769"
                     /db_xref="GeneID:107922086"
ORIGIN      
        1 megvgstrlg rasaryggst avfngpvrkw kkkwvhvsps staklsqsng ngsaassill
       61 crwtplsfad sgssavdged eeqppkrkyr ytpvavleee rrraaaakqv eneaktdenk
      121 tkrspdwlss ktdnelnmnn ilkketqdss mgnldlglcl kghdgshnsv gekvdqvkpa
      181 sstgfwaig
//
LOCUS       XP_016708097             542 aa            linear   PLN 06-AUG-2024
DEFINITION  trigger factor-like protein TIG, Chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016708097
VERSION     XP_016708097.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852608.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708097.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..542
                     /product="trigger factor-like protein TIG, Chloroplastic"
                     /calculated_mol_wt=61465
     Region          102..532
                     /region_name="tig"
                     /note="trigger factor; TIGR00115"
                     /db_xref="CDD:272913"
     CDS             1..542
                     /gene="LOC107922526"
                     /coded_by="XM_016852608.2:109..1737"
                     /db_xref="GeneID:107922526"
ORIGIN      
        1 mevcvnstkl lnlnqntrlf vprysishsf knpilqfnnn vqkrplnypl nqrscfsrqi
       61 rslqrpissr ikaspassgt sgaetdklpa dimvtetqep nsrvrlsvev paavgedcyk
      121 rvlkefmkqa kipgfrpgki pesvllnyvg eesvqkatve silkrtlpha mstvtgralr
      181 dsvriitkfs dmeksyssls slsydvivdv apevkwisen gyksmkivve idhdieaeka
      241 ceqeikrrhk slgtlkivtd rglqvgdlav ldisattieq desnvqkvpa aeskgfqfdt
      301 edddkvlpgf ldsiigirqg etksfpyvfp etwqqenlrg veaqftveck elfyrdlpel
      361 ndsiadklfp gctdlnqvke sllqkcqeme qaakdqatdn aildqlckmv eidipqslfe
      421 eqgrqlygar lleiqanvkl neqqlatlss pkavneflen qreniinlik qnlavgdifk
      481 renlqfstde lvkevqnsva efkrhkqeyd eervreqvqd vlegakvlew lkehadiqyv
      541 tr
//
LOCUS       XP_016708098             419 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidate cytidylyltransferase 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016708098
VERSION     XP_016708098.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852609.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..419
                     /product="phosphatidate cytidylyltransferase 1 isoform X1"
                     /calculated_mol_wt=48458
     Region          82..418
                     /region_name="PLN02594"
                     /note="phosphatidate cytidylyltransferase"
                     /db_xref="CDD:215322"
     CDS             1..419
                     /gene="LOC107922527"
                     /coded_by="XM_016852609.2:252..1511"
                     /db_xref="GeneID:107922527"
ORIGIN      
        1 mqkdnsapst ptsararhrr rsnefpades ktnghlllvn dhnkyrsmwi rafsslwmlg
       61 ffllviylgh lyvlamvvii qifmarelfn llrkahedkh lpgfrllnwh fyftamlfvy
      121 grilshrlvn tvtsdkifyr lvsrlikyqm vicyfsyiag fmwfiltlkk kmykyqfgqf
      181 awthmilivv ftqsaftvan ifegifwfll pasliavndv aayffgfffg ktplikispk
      241 ktwegfigas vattisafvl aniygsfqwl tcprkdlstg wlhcdpgplf kpeyypllpw
      301 lpsteiailp vqwhalwlgl fasiiapfgg ffasgfkraf kikdfgdsip ghggltdrmd
      361 cqmvmavfay iyhqsfvvpq dytvetimse ilssltleeq qilymklgqi lqermfgrn
//
LOCUS       XP_040942958             378 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidate cytidylyltransferase 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040942958
VERSION     XP_040942958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087024.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..378
                     /product="phosphatidate cytidylyltransferase 1 isoform X2"
                     /calculated_mol_wt=43652
     Region          82..377
                     /region_name="PLN02594"
                     /note="phosphatidate cytidylyltransferase"
                     /db_xref="CDD:215322"
     CDS             1..378
                     /gene="LOC107922527"
                     /coded_by="XM_041087024.1:254..1390"
                     /db_xref="GeneID:107922527"
ORIGIN      
        1 mqkdnsapst ptsararhrr rsnefpades ktnghlllvn dhnkyrsmwi rafsslwmlg
       61 ffllviylgh lyvlamvvii qifmarelfn llrkahedkh lpgfrllnwh fyftamlfvy
      121 grilshrlvn tvtsdkifyr lvsrlikyqm vicyfsyiag fmwfiltlkk kmykyqfgqf
      181 awthmilivv ftqsaftvan ifegifwfll pasliavndv aayffgfffg ktplikispk
      241 ktwegfigas vattisafvl psteiailpv qwhalwlglf asiiapfggf fasgfkrafk
      301 ikdfgdsipg hggltdrmdc qmvmavfayi yhqsfvvpqd ytvetimsei lssltleeqq
      361 ilymklgqil qermfgrn
//
LOCUS       XP_016707661             583 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707661
VERSION     XP_016707661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852172.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="65-kDa microtubule-associated protein 1 isoform
                     X1"
                     /calculated_mol_wt=64868
     Region          19..514
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..583
                     /gene="LOC107922245"
                     /coded_by="XM_016852172.2:180..1931"
                     /db_xref="GeneID:107922245"
ORIGIN      
        1 mavteaenpl vgeitcgsll qklqeiwdev gesdeerdkm llqieqecld vykrkveqaa
       61 ksraqllqal sdaklelstl vsalgdksfi sipettlgti neqlaaiapa leqllkqkee
      121 rvkefsdvqs qiqkicgeia gnaseqtgap avdesdlslk klneyqvklq elqkeksdrl
      181 hkvlefvstv hdlcavlgmd ffstvtevhp slddttgvqs ksisndtllr laetvsvlne
      241 dkkqrlhklq elatqlidlw nlmdtpeeer ilfdhvtcht sasvdgvtvp galaldlieq
      301 aeveverldq lkasrmkeia fkkqveleei farahieidp eaarekimal idsgnvepte
      361 lladmdnqia kakeevlsrk eildrvekwm saceeeswle dynrdenryn ssrgahlnlk
      421 raekarilvn kipgmvdtlv aktraweedr gisfsydgvp llamldeyam lrqereeekr
      481 rlrdqkkyge qqnteqeaif gskpsparps gpkkvvgpra nggtngtpsr rlslnatqng
      541 srsatkdgkr dsmklaapan fvaiskedaa shvsgtdpvp asp
//
LOCUS       XP_040942959             583 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942959
VERSION     XP_040942959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087025.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="65-kDa microtubule-associated protein 1 isoform
                     X1"
                     /calculated_mol_wt=64868
     Region          19..514
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..583
                     /gene="LOC107922245"
                     /coded_by="XM_041087025.1:232..1983"
                     /db_xref="GeneID:107922245"
ORIGIN      
        1 mavteaenpl vgeitcgsll qklqeiwdev gesdeerdkm llqieqecld vykrkveqaa
       61 ksraqllqal sdaklelstl vsalgdksfi sipettlgti neqlaaiapa leqllkqkee
      121 rvkefsdvqs qiqkicgeia gnaseqtgap avdesdlslk klneyqvklq elqkeksdrl
      181 hkvlefvstv hdlcavlgmd ffstvtevhp slddttgvqs ksisndtllr laetvsvlne
      241 dkkqrlhklq elatqlidlw nlmdtpeeer ilfdhvtcht sasvdgvtvp galaldlieq
      301 aeveverldq lkasrmkeia fkkqveleei farahieidp eaarekimal idsgnvepte
      361 lladmdnqia kakeevlsrk eildrvekwm saceeeswle dynrdenryn ssrgahlnlk
      421 raekarilvn kipgmvdtlv aktraweedr gisfsydgvp llamldeyam lrqereeekr
      481 rlrdqkkyge qqnteqeaif gskpsparps gpkkvvgpra nggtngtpsr rlslnatqng
      541 srsatkdgkr dsmklaapan fvaiskedaa shvsgtdpvp asp
//
LOCUS       XP_016707662             557 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707662
VERSION     XP_016707662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852173.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..557
                     /product="65-kDa microtubule-associated protein 1 isoform
                     X2"
                     /calculated_mol_wt=62075
     Region          19..488
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..557
                     /gene="LOC107922245"
                     /coded_by="XM_016852173.2:180..1853"
                     /db_xref="GeneID:107922245"
ORIGIN      
        1 mavteaenpl vgeitcgsll qklqeiwdev gesdeerdkm llqieqecld vykrkveqaa
       61 ksraqllqal sdaklelstl vsalgdksfi sipettlgti neqlaaiapa leqllkqkee
      121 rgapavdesd lslkklneyq vklqelqkek sdrlhkvlef vstvhdlcav lgmdffstvt
      181 evhpslddtt gvqsksisnd tllrlaetvs vlnedkkqrl hklqelatql idlwnlmdtp
      241 eeerilfdhv tchtsasvdg vtvpgalald lieqaeveve rldqlkasrm keiafkkqve
      301 leeifarahi eidpeaarek imalidsgnv eptelladmd nqiakakeev lsrkeildrv
      361 ekwmsaceee swledynrde nrynssrgah lnlkraekar ilvnkipgmv dtlvaktraw
      421 eedrgisfsy dgvpllamld eyamlrqere eekrrlrdqk kygeqqnteq eaifgskpsp
      481 arpsgpkkvv gpranggtng tpsrrlslna tqngsrsatk dgkrdsmkla apanfvaisk
      541 edaashvsgt dpvpasp
//
LOCUS       XP_016706232             420 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Gossypium
            hirsutum].
ACCESSION   XP_016706232
VERSION     XP_016706232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850743.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..420
                     /product="protein HOMOLOG OF MAMMALIAN LYST-INTERACTING
                     PROTEIN 5"
                     /calculated_mol_wt=46840
     Region          16..142
                     /region_name="Vta1"
                     /note="Vta1 like; pfam04652"
                     /db_xref="CDD:461380"
     Region          <229..>326
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          377..414
                     /region_name="Vta1_C"
                     /note="Vta1 C-terminal domain; pfam18097"
                     /db_xref="CDD:465647"
     CDS             1..420
                     /gene="LOC107920911"
                     /coded_by="XM_016850743.2:67..1329"
                     /db_xref="GeneID:107920911"
ORIGIN      
        1 manenepakl llpylqrade lqkqeplvay ycrlyamekg lkipvsertk ttiallvslm
       61 kqlekdkksl tlgsednlyl egfalnvfak adkqdragra dlntaktfya asiffeiisq
      121 fgplqpdleq kqkyaawkaa dirkalkegr kptcgppngd edlsvlssth sgsydhgpge
      181 lpvtsprqds dpspqfhdei nnqhqanipp stqfhdkidr qhsfdilash psfpprsyps
      241 hgqsfpqdpq rrfpspppts ksedptypha yhhqpysqep qqhlphnfps vdippylypn
      301 fqsypsfses slpsapshyp syyqgaeisy tpqsapptts ysstsqysst srnetvsepa
      361 ptmsqehqyd inyqpppeki aeahkaarfa vgalafddvs vaidylkksl elltnpsagq
//
LOCUS       XP_040942960             386 aa            linear   PLN 06-AUG-2024
DEFINITION  indole-3-acetate O-methyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_040942960
VERSION     XP_040942960.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087026.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="indole-3-acetate O-methyltransferase 1"
                     /calculated_mol_wt=42117
     Region          1..386
                     /region_name="PLN02668"
                     /note="indole-3-acetate carboxyl methyltransferase"
                     /db_xref="CDD:178273"
     CDS             1..386
                     /gene="LOC107921728"
                     /coded_by="XM_041087026.1:48..1208"
                     /db_xref="GeneID:107921728"
ORIGIN      
        1 mapmgdnvvv snvnleklls mkggqgeasy annsqaqalh arsmlhllee aldsvhlssp
       61 evpfvvvdlg cscgsntiyi vdviikhmvk ryessgyepp efsaffsdlp sndfntlfql
      121 lpplannggs smeeclasng hrsyfaagvp gsfyrrlfpa rsidvfhsaf slhwlsqmpe
      181 svldrrstay nkgrvfihga sdssanaykk qfqtdlakfl rarsiemkrg gsmflvclgr
      241 tsvdptdqgg agllfgthfq dawddlvqeg lisaekrdnf nipvyapslq dfkevveadg
      301 sftinklevf kggsplvvsr pddasevgra lanscrtvsg vlvdahigdk lseelflrve
      361 srgtshakel leqlqffhiv aslsfa
//
LOCUS       XP_016707759             414 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division protein FtsZ homolog 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016707759
VERSION     XP_016707759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852270.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..414
                     /product="cell division protein FtsZ homolog 1,
                     chloroplastic"
                     /calculated_mol_wt=43125
     Region          58..378
                     /region_name="FtsZ"
                     /note="Cell division GTPase FtsZ [Cell cycle control, cell
                     division, chromosome partitioning]; COG0206"
                     /db_xref="CDD:439976"
     CDS             1..414
                     /gene="LOC107922297"
                     /coded_by="XM_016852270.2:288..1532"
                     /db_xref="GeneID:107922297"
ORIGIN      
        1 matlqvtlak dfisptssss slssklcfss kkplkrssfs tyhrfgrisc sfasmetaki
       61 kvvgvggsgn navnrmigsg lqgvdfyain tdsqallqss aenpiqigel ltrglgtggn
      121 pllgeqaaee sadaianalk gsdlvfitag mgggtgsgaa pvvaqiakea gyltvgvvty
      181 pfsfegrkrt mqaleaiekl qknvdtlivi pndrlldiad eqtplqdafl laddvlcqgv
      241 qgisdiitip glvnvdfadv kavmkdsgta mlgvgvsssk nraveaaeqa ilapligssi
      301 qsatgvayni tggkditlqe vnrvsqvvts ladpsaniif gavvddryng eihvtiiatg
      361 fsqsfqktll tdpkaakein katmgqeskg iplplespsl stvpsrsspr rlff
//
LOCUS       XP_016707760             230 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-51 [Gossypium hirsutum].
ACCESSION   XP_016707760
VERSION     XP_016707760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="syntaxin-51"
                     /calculated_mol_wt=25490
     Region          137..194
                     /region_name="SNARE_Qc"
                     /note="SNARE motif, subgroup Qc; cd15841"
                     /db_xref="CDD:277194"
     Site            order(141..144,146..148,150..152,154..155,157..162,
                     164..165,167..168,171..172,174..176,178..180,182..183,
                     185..186,189..190,192..193)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277194"
     Site            168
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277194"
     Region          170..221
                     /region_name="SNARE"
                     /note="SNARE domain; pfam05739"
                     /db_xref="CDD:461727"
     CDS             1..230
                     /gene="LOC107922298"
                     /coded_by="XM_016852271.2:142..834"
                     /db_xref="GeneID:107922298"
ORIGIN      
        1 massdtwike yneaariadd ingmiseris lpasgpetqr hasairrkit ilgtrldglq
       61 sllsrptgkp ltdkemnrrk dmvanlrska nqmasafnms nfanresllg petkqdamsr
      121 tvgldnsglv glqrqimkeq deglekleet vmstkhiala vneeldlhtr liddldehvd
      181 vtdsrlrrvq knlailnkra kgscscmcml lavvgivilv vaiyllvkyl
//
LOCUS       XP_040942962             230 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-51 [Gossypium hirsutum].
ACCESSION   XP_040942962
VERSION     XP_040942962.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087028.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..230
                     /product="syntaxin-51"
                     /calculated_mol_wt=25490
     Region          137..194
                     /region_name="SNARE_Qc"
                     /note="SNARE motif, subgroup Qc; cd15841"
                     /db_xref="CDD:277194"
     Site            order(141..144,146..148,150..152,154..155,157..162,
                     164..165,167..168,171..172,174..176,178..180,182..183,
                     185..186,189..190,192..193)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277194"
     Site            168
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277194"
     Region          170..221
                     /region_name="SNARE"
                     /note="SNARE domain; pfam05739"
                     /db_xref="CDD:461727"
     CDS             1..230
                     /gene="LOC107922298"
                     /coded_by="XM_041087028.1:235..927"
                     /db_xref="GeneID:107922298"
ORIGIN      
        1 massdtwike yneaariadd ingmiseris lpasgpetqr hasairrkit ilgtrldglq
       61 sllsrptgkp ltdkemnrrk dmvanlrska nqmasafnms nfanresllg petkqdamsr
      121 tvgldnsglv glqrqimkeq deglekleet vmstkhiala vneeldlhtr liddldehvd
      181 vtdsrlrrvq knlailnkra kgscscmcml lavvgivilv vaiyllvkyl
//
LOCUS       XP_016707164             354 aa            linear   PLN 06-AUG-2024
DEFINITION  probable long-chain-alcohol O-fatty-acyltransferase 3 [Gossypium
            hirsutum].
ACCESSION   XP_016707164
VERSION     XP_016707164.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851675.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707164.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..354
                     /product="probable long-chain-alcohol
                     O-fatty-acyltransferase 3"
                     /calculated_mol_wt=40349
     Region          197..277
                     /region_name="MBOAT_2"
                     /note="Membrane bound O-acyl transferase family;
                     pfam13813"
                     /db_xref="CDD:372734"
     CDS             1..354
                     /gene="LOC107921834"
                     /coded_by="XM_016851675.2:70..1134"
                     /db_xref="GeneID:107921834"
ORIGIN      
        1 mdgeinnlvk lwlsilaslf ycyflaskip kgkfrlisll pifilftalp lylsyvfpig
       61 liallfswlg nfklllfafd kgplsthssn slihfifias lpikikenek ypflkspdih
      121 qnsskkhpkl plnwptkvll failvsahdy kqtlhpkivl llyscmvyll idiifgifng
      181 lvhatsglel eppsdepyls tslqdfwgrr wnlmvtyllr htvykparsf fdnmlgsmwa
      241 plaavlaafi vsglmhelvf yyvtrvsptw evtwyfvlhg acvvvefgvk rvfsskaqlh
      301 wavstpltvg fvvatamwlf fppvlrtgav ekaieeckvl ldfakvlwkv nsfw
//
LOCUS       XP_016707554            1362 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ENHANCED DOWNY MILDEW 2 [Gossypium hirsutum].
ACCESSION   XP_016707554
VERSION     XP_016707554.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852065.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707554.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1362
                     /product="protein ENHANCED DOWNY MILDEW 2"
                     /calculated_mol_wt=151772
     Region          8..139
                     /region_name="DNMT1-RFD"
                     /note="Cytosine specific DNA methyltransferase replication
                     foci domain; pfam12047"
                     /db_xref="CDD:463444"
     Region          228..>251
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          289..354
                     /region_name="PHD2_NSD"
                     /note="PHD finger 2 found in nuclear receptor-binding SET
                     domain-containing (NSD) proteins; cd15565"
                     /db_xref="CDD:277040"
     Site            order(289,306..310,316,349)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277040"
     Region          356..421
                     /region_name="PHD3_NSD"
                     /note="PHD finger 3 found in nuclear receptor-binding SET
                     domain-containing (NSD) proteins; cd15566"
                     /db_xref="CDD:277041"
     Site            order(369..370,373..375,379,416)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277041"
     Region          <1300..>1354
                     /region_name="DUF5954"
                     /note="Family of unknown function (DUF5954); pfam19379"
                     /db_xref="CDD:466061"
     CDS             1..1362
                     /gene="LOC107922174"
                     /coded_by="XM_016852065.2:149..4237"
                     /db_xref="GeneID:107922174"
ORIGIN      
        1 mafsddeeee alihsvsnyy fndekdeavc fsqlplqfgg keclsggskk kiflrgiadd
       61 glltickhvt awkfdlsnvg kpdisvlskd igwlklqkpr ksfepvirsv lvsvhclhli
      121 swnpdlsgks lwdqlakifs lyevkpsqnd lvdhmdliae avksddslak skflhsflee
      181 kpkkrklvne nargtsisgf ivddavdgpe lddsnnddde ddlydsvcaf cdnggslicc
      241 dgrcmrsfha tedddsares aceslgftpn qvkaletllc knceynqhqc fscgklgssd
      301 kssgaevfrc snatcghfyh phcvakllhk gdkvaaeeha krissgefft cpthkccvcq
      361 qgenkkveel qfalcrrcpt syhrkclpre iafddieeeg iitrawdgll vnrvliyclk
      421 heidedlgtp irdhikfpfd eskkrkasdv ltshekvgsk kktlalegts qertamkaak
      481 qssvvkadqt skksekvtpr tnalkkvkat gpskkplrqn skslpmdagk ssaddgnkts
      541 lggrlfslmn qeseqqikpg rqdnlkggls kaamvnstat skssgmpsld adserrllnl
      601 mkeaessvtl ediitkpkvl sthgyssrsv idrtitlgki eglveavrma lakledgcsi
      661 edaqavcepe vlnqifkwqn klrvylapfl ygmryssfgr hftkvdklee ivdrlhwyvq
      721 dgdtivdfcc gandfslimk rkleetgkkc sfknydifqa kndlnferrd wmsvqqkelp
      781 tgsqlimgln ppfgvkaala nkfidkalef npkllilivp peterldkkk slkypyelvw
      841 ednnllsgks fylpgsidan dkqmdqwnvm vpplylwsrs dfsaknksia ekhghvprep
      901 assnqemnid etrrsdfelp leddglrdda telkdhmqnh eieeckkeks vevtpkecsp
      961 rqqsdeknqs ketssnkkrk hseenngrkt dkksggrtpr sethdgiphs spsnvmgssr
     1021 ssvegasskl hseenlvrkt dikgggripr semhsgiphp spsnvigssr ssvkgaspkl
     1081 hseenlgrkt dkmsggrtpr sethsgiphs spsnvmgssr ssvegasklh seenlgrktn
     1141 kkggrttrse tysgiphssp snvmgssrss vecasrspnq hripnmhssq talrasygdt
     1201 rtsvgddmgr rynmnydpys agthshgyrp ypdemnrefn lrsqvhlygq epglfprrnd
     1261 laglnslygp ttpsygqhng atvnpsyrmn msamqryapr ldelnytrmg gagpepplmg
     1321 nrntfydprp pfmidprapr ppytlgfspg pyhpyshhns ag
//
LOCUS       XP_040942963             699 aa            linear   PLN 06-AUG-2024
DEFINITION  fimbrin-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942963
VERSION     XP_040942963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087029.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..699
                     /product="fimbrin-1 isoform X1"
                     /calculated_mol_wt=77672
     Region          52..618
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          123..238
                     /region_name="CH_AtFIM_like_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21293"
                     /db_xref="CDD:409142"
     Site            order(124,128,192,194..195,198..199,201,210..218,223,
                     225..226,228..229,232..233,236)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409142"
     Region          391..504
                     /region_name="CH_AtFIM_like_rpt3"
                     /note="third calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21299"
                     /db_xref="CDD:409148"
     Site            order(395,399,452,454..455,458..459,461,470..478,483,
                     485..486,488..489,492..493,496)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409148"
     CDS             1..699
                     /gene="LOC107922269"
                     /coded_by="XM_041087029.1:385..2484"
                     /db_xref="GeneID:107922269"
ORIGIN      
        1 mssyvgvlvs dqwlqsqftq velrslnskf vsvknqngkv tvgdlpplmv klkafsallt
       61 edeirqilge sygdmsseid fetflrvyln mqgqatgklg gpknsssflk astttllhti
      121 sesekasyvt hiniyladdp flkqflpldp atndlfhlak dgvllcklin vavpgtider
      181 aintkrvlnp wernenhtlc lnsakaigct vvnigtqdlv earphlvlgl isqiikiqll
      241 adlnlkktpq lvelvedsna dveelmglap ekvllkwmnf hlnkagyekt vanfssdvkd
      301 gkayayllnv lapefcnplt ldtkdpvera klvldhaerm gckrylspkd itegstnlnl
      361 afvaqifher nglstdskki sfaermtddv qisreercfr lwinslgies yvnnvfedvr
      421 tgwillevld kvapgsvnwk haskppikfp frkvencnqv vkigrqlkfs vvnlggndiv
      481 qgnkklivaf lwqlmrfnml qllkslrsrs rgkeitdadi mnwanrkvks tgrstqiesf
      541 kdkslstglf flellsavep rvvnwnlvtk gesdeekrln atyiisvark lgcsifllpe
      601 dimevnqkmi ltltasimyw clqhaaeege valspangng stytsdtspa psisgeders
      661 slcgeisslt mddaasditv sssqcenedt eiataesha
//
LOCUS       XP_016707702             699 aa            linear   PLN 06-AUG-2024
DEFINITION  fimbrin-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707702
VERSION     XP_016707702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..699
                     /product="fimbrin-1 isoform X1"
                     /calculated_mol_wt=77672
     Region          52..618
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          123..238
                     /region_name="CH_AtFIM_like_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21293"
                     /db_xref="CDD:409142"
     Site            order(124,128,192,194..195,198..199,201,210..218,223,
                     225..226,228..229,232..233,236)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409142"
     Region          391..504
                     /region_name="CH_AtFIM_like_rpt3"
                     /note="third calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21299"
                     /db_xref="CDD:409148"
     Site            order(395,399,452,454..455,458..459,461,470..478,483,
                     485..486,488..489,492..493,496)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409148"
     CDS             1..699
                     /gene="LOC107922269"
                     /coded_by="XM_016852213.2:335..2434"
                     /db_xref="GeneID:107922269"
ORIGIN      
        1 mssyvgvlvs dqwlqsqftq velrslnskf vsvknqngkv tvgdlpplmv klkafsallt
       61 edeirqilge sygdmsseid fetflrvyln mqgqatgklg gpknsssflk astttllhti
      121 sesekasyvt hiniyladdp flkqflpldp atndlfhlak dgvllcklin vavpgtider
      181 aintkrvlnp wernenhtlc lnsakaigct vvnigtqdlv earphlvlgl isqiikiqll
      241 adlnlkktpq lvelvedsna dveelmglap ekvllkwmnf hlnkagyekt vanfssdvkd
      301 gkayayllnv lapefcnplt ldtkdpvera klvldhaerm gckrylspkd itegstnlnl
      361 afvaqifher nglstdskki sfaermtddv qisreercfr lwinslgies yvnnvfedvr
      421 tgwillevld kvapgsvnwk haskppikfp frkvencnqv vkigrqlkfs vvnlggndiv
      481 qgnkklivaf lwqlmrfnml qllkslrsrs rgkeitdadi mnwanrkvks tgrstqiesf
      541 kdkslstglf flellsavep rvvnwnlvtk gesdeekrln atyiisvark lgcsifllpe
      601 dimevnqkmi ltltasimyw clqhaaeege valspangng stytsdtspa psisgeders
      661 slcgeisslt mddaasditv sssqcenedt eiataesha
//
LOCUS       XP_016707701             699 aa            linear   PLN 06-AUG-2024
DEFINITION  fimbrin-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707701
VERSION     XP_016707701.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707701.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..699
                     /product="fimbrin-1 isoform X1"
                     /calculated_mol_wt=77672
     Region          52..618
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          123..238
                     /region_name="CH_AtFIM_like_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21293"
                     /db_xref="CDD:409142"
     Site            order(124,128,192,194..195,198..199,201,210..218,223,
                     225..226,228..229,232..233,236)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409142"
     Region          391..504
                     /region_name="CH_AtFIM_like_rpt3"
                     /note="third calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21299"
                     /db_xref="CDD:409148"
     Site            order(395,399,452,454..455,458..459,461,470..478,483,
                     485..486,488..489,492..493,496)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409148"
     CDS             1..699
                     /gene="LOC107922269"
                     /coded_by="XM_016852212.2:295..2394"
                     /db_xref="GeneID:107922269"
ORIGIN      
        1 mssyvgvlvs dqwlqsqftq velrslnskf vsvknqngkv tvgdlpplmv klkafsallt
       61 edeirqilge sygdmsseid fetflrvyln mqgqatgklg gpknsssflk astttllhti
      121 sesekasyvt hiniyladdp flkqflpldp atndlfhlak dgvllcklin vavpgtider
      181 aintkrvlnp wernenhtlc lnsakaigct vvnigtqdlv earphlvlgl isqiikiqll
      241 adlnlkktpq lvelvedsna dveelmglap ekvllkwmnf hlnkagyekt vanfssdvkd
      301 gkayayllnv lapefcnplt ldtkdpvera klvldhaerm gckrylspkd itegstnlnl
      361 afvaqifher nglstdskki sfaermtddv qisreercfr lwinslgies yvnnvfedvr
      421 tgwillevld kvapgsvnwk haskppikfp frkvencnqv vkigrqlkfs vvnlggndiv
      481 qgnkklivaf lwqlmrfnml qllkslrsrs rgkeitdadi mnwanrkvks tgrstqiesf
      541 kdkslstglf flellsavep rvvnwnlvtk gesdeekrln atyiisvark lgcsifllpe
      601 dimevnqkmi ltltasimyw clqhaaeege valspangng stytsdtspa psisgeders
      661 slcgeisslt mddaasditv sssqcenedt eiataesha
//
LOCUS       XP_040942964             609 aa            linear   PLN 06-AUG-2024
DEFINITION  fimbrin-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942964
VERSION     XP_040942964.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087030.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="fimbrin-1 isoform X2"
                     /calculated_mol_wt=67510
     Region          20..528
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          33..148
                     /region_name="CH_AtFIM_like_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21293"
                     /db_xref="CDD:409142"
     Site            order(34,38,102,104..105,108..109,111,120..128,133,
                     135..136,138..139,142..143,146)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409142"
     Region          301..414
                     /region_name="CH_AtFIM_like_rpt3"
                     /note="third calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21299"
                     /db_xref="CDD:409148"
     Site            order(305,309,362,364..365,368..369,371,380..388,393,
                     395..396,398..399,402..403,406)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409148"
     CDS             1..609
                     /gene="LOC107922269"
                     /coded_by="XM_041087030.1:272..2101"
                     /db_xref="GeneID:107922269"
ORIGIN      
        1 mqgqatgklg gpknsssflk astttllhti sesekasyvt hiniyladdp flkqflpldp
       61 atndlfhlak dgvllcklin vavpgtider aintkrvlnp wernenhtlc lnsakaigct
      121 vvnigtqdlv earphlvlgl isqiikiqll adlnlkktpq lvelvedsna dveelmglap
      181 ekvllkwmnf hlnkagyekt vanfssdvkd gkayayllnv lapefcnplt ldtkdpvera
      241 klvldhaerm gckrylspkd itegstnlnl afvaqifher nglstdskki sfaermtddv
      301 qisreercfr lwinslgies yvnnvfedvr tgwillevld kvapgsvnwk haskppikfp
      361 frkvencnqv vkigrqlkfs vvnlggndiv qgnkklivaf lwqlmrfnml qllkslrsrs
      421 rgkeitdadi mnwanrkvks tgrstqiesf kdkslstglf flellsavep rvvnwnlvtk
      481 gesdeekrln atyiisvark lgcsifllpe dimevnqkmi ltltasimyw clqhaaeege
      541 valspangng stytsdtspa psisgeders slcgeisslt mddaasditv sssqcenedt
      601 eiataesha
//
LOCUS       XP_040942965             551 aa            linear   PLN 06-AUG-2024
DEFINITION  fimbrin-1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040942965
VERSION     XP_040942965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087031.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..551
                     /product="fimbrin-1 isoform X3"
                     /calculated_mol_wt=61409
     Region          <14..90
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(44,46..47,50..51,53,66..70,75,77..78,80..81,84..85,
                     88)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409142"
     Region          113..220
                     /region_name="CH_AtFIM_like_rpt2"
                     /note="second calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21296"
                     /db_xref="CDD:409145"
     Site            order(122,126,177,179..180,183..184,186,194..202,207,
                     209..210,212..213,216..217,220)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409145"
     Region          243..356
                     /region_name="CH_AtFIM_like_rpt3"
                     /note="third calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21299"
                     /db_xref="CDD:409148"
     Site            order(247,251,304,306..307,310..311,313,322..330,335,
                     337..338,340..341,344..345,348)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409148"
     Region          366..474
                     /region_name="CH_AtFIM_like_rpt4"
                     /note="fourth calponin homology (CH) domain found in the
                     Arabidopsis thaliana fimbrin family; cd21302"
                     /db_xref="CDD:409151"
     Site            order(368,372,428,430..431,434..435,437,445..453,458,
                     460..461,463..464,467..468,471)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409151"
     CDS             1..551
                     /gene="LOC107922269"
                     /coded_by="XM_041087031.1:200..1855"
                     /db_xref="GeneID:107922269"
ORIGIN      
        1 mifsisqkme ysygtfmgkl invavpgtid eraintkrvl npwernenht lclnsakaig
       61 ctvvnigtqd lvearphlvl glisqiikiq lladlnlkkt pqlvelveds nadveelmgl
      121 apekvllkwm nfhlnkagye ktvanfssdv kdgkayayll nvlapefcnp ltldtkdpve
      181 raklvldhae rmgckrylsp kditegstnl nlafvaqifh ernglstdsk kisfaermtd
      241 dvqisreerc frlwinslgi esyvnnvfed vrtgwillev ldkvapgsvn wkhaskppik
      301 fpfrkvencn qvvkigrqlk fsvvnlggnd ivqgnkkliv aflwqlmrfn mlqllkslrs
      361 rsrgkeitda dimnwanrkv kstgrstqie sfkdkslstg lfflellsav eprvvnwnlv
      421 tkgesdeekr lnatyiisva rklgcsifll pedimevnqk miltltasim ywclqhaaee
      481 gevalspang ngstytsdts papsisgede rsslcgeiss ltmddaasdi tvsssqcene
      541 dteiataesh a
//
LOCUS       XP_040942966             106 aa            linear   PLN 06-AUG-2024
DEFINITION  putative lipid-transfer protein DIR1 [Gossypium hirsutum].
ACCESSION   XP_040942966
VERSION     XP_040942966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087032.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="putative lipid-transfer protein DIR1"
                     /calculated_mol_wt=11319
     Region          32..95
                     /region_name="nsLTP_like"
                     /note="Non-specific lipid-transfer protein (nsLTP)-like
                     subfamily; composed of predominantly uncharacterized
                     proteins with similarity to nsLTPs, including Medicago
                     truncatula MtN5, the root-specific Phaseolus vulgaris
                     PVR3, Antirrhinum majus FIL1, and Lilium...; cd04660"
                     /db_xref="CDD:240018"
     CDS             1..106
                     /gene="LOC107921980"
                     /coded_by="XM_041087032.1:306..626"
                     /db_xref="GeneID:107921980"
ORIGIN      
        1 mamasekllv qclvatllli aavegakett icniplkkle qckpavtgen pppptkeccs
       61 likqadltcl cnykdalpaf qiepsrafal pqkckckhav ppqckp
//
LOCUS       XP_016707265             762 aa            linear   PLN 06-AUG-2024
DEFINITION  glycerophosphodiester phosphodiesterase GDPDL3 [Gossypium
            hirsutum].
ACCESSION   XP_016707265
VERSION     XP_016707265.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851776.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707265.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..762
                     /product="glycerophosphodiester phosphodiesterase GDPDL3"
                     /calculated_mol_wt=82543
     Region          43..344
                     /region_name="GDPD_SHV3_repeat_1"
                     /note="Glycerophosphodiester phosphodiesterase domain
                     repeat 1 of glycerophosphodiester phosphodiesterase-like
                     protein SHV3 and SHV3-like proteins; cd08603"
                     /db_xref="CDD:176545"
     Region          362..660
                     /region_name="GDPD_SHV3_repeat_2"
                     /note="Glycerophosphodiester phosphodiesterase domain
                     repeat 2 of glycerophosphodiester phosphodiesterase-like
                     protein SHV3 and SHV3-like proteins; cd08604"
                     /db_xref="CDD:176546"
     CDS             1..762
                     /gene="LOC107921978"
                     /coded_by="XM_016851776.2:248..2536"
                     /db_xref="GeneID:107921978"
ORIGIN      
        1 mgslrgisia ifvvqallas valvsaqgsa tpsrwqtlsg eapvviargg fsgifsdssf
       61 gayslalvtg psdvilwcdv qltkdgagic fpdlkldnns niatvftdkp ktylvngvst
      121 kglfsidytl ndlgsvylsq giysrtnkfd gnnypimtvq dtytqlkplg fwlniqhdaf
      181 yaahnlsmrs fvlsvsrnak vtvdyisspe vaflrniapi frrsstkvvf rflgpkdvep
      241 stnqtydsll tnltfiktfa sgiivpksyi wpvdgalylq pstsivldah keglevfasd
      301 fyndvpfsfn ysydpvaeyl qfvdngkfsv dgvltdfpit paaaidcfah igknaskqad
      361 llvisnngas gdypgctdma ytkaiqdgvd vldcpvqmtk dgipiclgsi nliqstdivr
      421 tgfsnltetv peimqssgif tynlswsdik slkpvisspq sqyklfrnpk fqnagtylkl
      481 seflsmantt sslngvlisi enaaylakqg fgvtdavlka lneagydkqt tqkvmiqsss
      541 ssvlmkfkgk tnyqlvykid ediggaqsst iddikrfasa vviskdsvfp ensaflarat
      601 dvvsrlqaan lsvlvqtfsn eftsqawdff sdatveinsf yagagingvi tdfpktsdry
      661 rrnrclkrgn ktpiymspvq pgsllqlvtt dylppaeapk pyltesdvve pplppvaktt
      721 ststpsgtva aapapngqpk vaasiivplm avllamyycf ei
//
LOCUS       XP_040942967             520 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942967
VERSION     XP_040942967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087033.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="sodium/hydrogen exchanger 4 isoform X1"
                     /calculated_mol_wt=58315
     Region          39..>476
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..520
                     /gene="LOC107921979"
                     /coded_by="XM_041087033.1:160..1722"
                     /db_xref="GeneID:107921979"
ORIGIN      
        1 mfefvrnlah eheqvvpisv fvailclclv ighlleenrw vnesitaili ggvagtvilf
       61 lnkgksshil rfseelffiy llppiifnag fqvkkkqffq nfitimlfgv igvfistsii
      121 tagswwlfpk lgffgltare ylavgtifss tdtvctlqvl hqdenpllys lvfgegvvnd
      181 atsvvlfnai qkidvsrins rtslqligdf iylfststal gvtfglvtay slktlyfgrh
      241 stvrelaimv lmaylsymla elldlsgilt vffcgilmsh yawynvtess rittrhifam
      301 msfvaetfif lyvgmdaldm ekwkmtrlsv gtlmasfgtl vflilvgraa fvfplsafsn
      361 ylnkhpdrsk pltfrhqvvi wwaglmrgav sialafkqft fsgvtwdpvn aamitntiiv
      421 vlfttlvfgf ltkplilcll pqhvtdtsde gqgskspked mtlpllsfea sastnilrak
      481 dslsmlierp vytvhfywrk fddrymrpif ggpissppec
//
LOCUS       XP_040942968             501 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942968
VERSION     XP_040942968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087034.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..501
                     /product="sodium/hydrogen exchanger 4 isoform X2"
                     /calculated_mol_wt=56102
     Region          39..>457
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..501
                     /gene="LOC107921979"
                     /coded_by="XM_041087034.1:161..1666"
                     /db_xref="GeneID:107921979"
ORIGIN      
        1 mfefvrnlah eheqvvpisv fvailclclv ighlleenrw vnesitaili ggvagtvilf
       61 lnkgksshil rfqvkkkqff qnfitimlfg vigvfistsi itagswwlfp klgffgltar
      121 eylavgtifs stdtvctlqv lhqdenplly slvfgegvvn datsvvlfna iqkidvsrin
      181 srtslqligd fiylfststa lgvtfglvta yslktlyfgr hstvrelaim vlmaylsyml
      241 aelldlsgil tvffcgilms hyawynvtes srittrhifa mmsfvaetfi flyvgmdald
      301 mekwkmtrls vgtlmasfgt lvflilvgra afvfplsafs nylnkhpdrs kpltfrhqvv
      361 iwwaglmrga vsialafkqf tfsgvtwdpv naamitntii vvlfttlvfg fltkplilcl
      421 lpqhvtdtsd egqgskspke dmtlpllsfe asastnilra kdslsmlier pvytvhfywr
      481 kfddrymrpi fggpissppe c
//
LOCUS       XP_016707264             302 aa            linear   PLN 06-AUG-2024
DEFINITION  pirin-like protein [Gossypium hirsutum].
ACCESSION   XP_016707264
VERSION     XP_016707264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851775.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="pirin-like protein"
                     /calculated_mol_wt=33540
     Region          24..279
                     /region_name="YhaK"
                     /note="Redox-sensitive bicupin YhaK, pirin superfamily
                     [General function prediction only]; COG1741"
                     /db_xref="CDD:441347"
     CDS             1..302
                     /gene="LOC107921977"
                     /coded_by="XM_016851775.2:153..1061"
                     /db_xref="GeneID:107921977"
ORIGIN      
        1 mpekegscvg lneprlvvrk flarpqpegv gavvrrsigr felryfdpfl vldefsvttp
       61 agfpdhphrg fetvtymlqg avkhedfdgh kgtigagdlq wmtagrgivh sempaaqgtq
      121 kglqlwinls skykmiepry qeisskdiae atkdgikvrv iagealgtks avytrtptmy
      181 ldftlepgah lqqpipeswn afvyvlegeg ifgrsksspv nahhllllgs gdgleawnks
      241 skllrfilvg geplceplvq fgpfvmntqe eidrtindfe nytngfekar hwrsesgltl
      301 df
//
LOCUS       XP_040942969             508 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: beta-1,2-xylosyltransferase [Gossypium
            hirsutum].
ACCESSION   XP_040942969
VERSION     XP_040942969.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087035.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="LOW QUALITY PROTEIN:
                     beta-1,2-xylosyltransferase"
                     /calculated_mol_wt=57149
     Region          219..483
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..508
                     /gene="LOC107922453"
                     /coded_by="XM_041087035.1:91..1617"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:107922453"
ORIGIN      
        1 mnkkhatlfk tllalfalns itlylyfsss hhhhdnrrdt taegfpaiip hrgphlskpw
       61 piipsylpws ltsnvpsksc eayfgngftk sadvlpakaa vrsgsswfrc hyswtlrssi
      121 ceggkirmdp gkikmsrgge kledvigrte deempefedg afeveaegrg srskikklvg
      181 eeflneflpv gnvmkhtmre lvrsivvvge tdftcsqmve eptllitxir vcnlfhtvtd
      241 wysayvssrv tglpnrphlv fvdghcetql eetwkalfss lryaknfsgp vcfrhavlsp
      301 lgyetalfkg lsedidcqga sahdlwqspd dkktarlsef gemirdafgf pvnrhhsdkt
      361 vsghynilfv rredylahpr hrgkvesrls neqevfdslq kwasdhqeck vnlvnglfah
      421 msmkeqvrai qdasviigah gaglthivsa tpntvileii ssffrrphfq liaqwkgley
      481 hainldgsya npgvvidrln kimrslrc
//
LOCUS       XP_016708188             219 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S8 [Gossypium hirsutum].
ACCESSION   XP_016708188
VERSION     XP_016708188.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852699.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..219
                     /product="40S ribosomal protein S8"
                     /calculated_mol_wt=24852
     Region          1..214
                     /region_name="PTZ00148"
                     /note="40S ribosomal protein S8; Provisional"
                     /db_xref="CDD:240292"
     CDS             1..219
                     /gene="LOC107922595"
                     /coded_by="XM_016852699.2:156..815"
                     /db_xref="GeneID:107922595"
ORIGIN      
        1 mgisrdsmhk rratggkkka wrkkrkyelg rqpantklss nktvrrirvr ggnvkwralr
       61 ldtgnyswgs eavtrktril dvvynasnne lvrtqtlvks aivqvdaapf kqwylqhygv
      121 dlgrkkktla aatkkdgeeg etvaeeakks khvlrklekr qqnrkldphi edqfssgrll
      181 acissrpgqc gradgyileg kelefymkki qrrkgkgaa
//
LOCUS       XP_016706518             306 aa            linear   PLN 06-AUG-2024
DEFINITION  probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
            LOGL10 [Gossypium hirsutum].
ACCESSION   XP_016706518
VERSION     XP_016706518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="probable cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOGL10"
                     /calculated_mol_wt=33946
     Region          90..283
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..306
                     /gene="LOC107921156"
                     /coded_by="XM_016851029.2:248..1168"
                     /db_xref="GeneID:107921156"
ORIGIN      
        1 mgfallgslg sfvsvrdshh wnvrfqsftl kerfvvgfnl aknfraykkf grvslcksef
       61 vdfeertspn evrkeieqcy elihrlgrgv vylgssrmgp ghphysqtle lareianlld
      121 cttwtgagpg lmdaaikgaq eagkavggfk igkeagewtt skfhpylpse tyltcrffsa
      181 rkhglvdaav rssssdktav valpggvgtl demfeilali qlerigselp vpfivmnyds
      241 fyaklldfld dcedwgtvsk gevsslwkic ntnsdalvyl aefydlpfsd eqkhgtears
      301 ahkqvp
//
LOCUS       XP_016706519             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706519
VERSION     XP_016706519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19680
     CDS             1..166
                     /gene="LOC107921157"
                     /coded_by="XM_016851030.2:220..720"
                     /db_xref="GeneID:107921157"
ORIGIN      
        1 mdyptedmnc vlrvdtrflg wrvmlvrvld sidgitykid gekgivqitg rinprqlmkt
       61 laevglhadf srvrsqfgem nipsrhcydy ryyggygynp yvkpeyyygy pplqqrnwhp
      121 iyenyprylh ynqnqpvyep qaeyfpqppp qpdgfrngdp ewctim
//
LOCUS       XP_016706396             209 aa            linear   PLN 06-AUG-2024
DEFINITION  chloroplastic import inner membrane translocase subunit TIM22-2
            [Gossypium hirsutum].
ACCESSION   XP_016706396
VERSION     XP_016706396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..209
                     /product="chloroplastic import inner membrane translocase
                     subunit TIM22-2"
                     /calculated_mol_wt=21586
     Region          41..140
                     /region_name="Tim17"
                     /note="Tim17/Tim22/Tim23/Pmp24 family; pfam02466"
                     /db_xref="CDD:460567"
     CDS             1..209
                     /gene="LOC107921051"
                     /coded_by="XM_016850907.2:163..792"
                     /db_xref="GeneID:107921051"
ORIGIN      
        1 madldsssss sedietnsdp nsskaiipnp lnsnsnspav cllqfagdst agafmgsifg
       61 ygsglikkkg fkgsfveags yaktfavlsg vhslvvcflk rlrgkddvin agvagcctgl
      121 alsfpgapqa liqscltfga fsfiveglnk qqpalvhsfs vrnksghyeg phpialplsl
      181 pipdelkgaf ssfckslskp negkfstgn
//
LOCUS       XP_040942970             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942970
VERSION     XP_040942970.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087036.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18509
     CDS             1..166
                     /gene="LOC121213832"
                     /coded_by="XM_041087036.1:917..1417"
                     /db_xref="GeneID:121213832"
ORIGIN      
        1 miklfksiqd vsysidtqtk fayvsgeidk elllkllaka kthafthqin yginlpkhts
       61 eptmtcvllv dtdipvwhkt mcllfkpmqg vtftinaftr qvyisgkvsp vlqlkllaka
      121 eangarlcwl yygcehdpck qsvakdetss nlalsskpkn sfcclm
//
LOCUS       XP_016707309            1380 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TORNADO 1 [Gossypium hirsutum].
ACCESSION   XP_016707309
VERSION     XP_016707309.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851820.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707309.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1380
                     /product="protein TORNADO 1"
                     /calculated_mol_wt=156887
     Region          <74..327
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          494..693
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            499..506
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206741"
     Site            order(501..507,562,636..637,639,676..678)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206741"
     Site            540
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206741"
     Site            544..546
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206741"
     Site            559..562
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206741"
     Site            order(561..562,588..589)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206741"
     Site            636..639
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206741"
     Site            676..678
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206741"
     Region          719..924
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     CDS             1..1380
                     /gene="LOC107922004"
                     /coded_by="XM_016851820.2:209..4351"
                     /db_xref="GeneID:107922004"
ORIGIN      
        1 masnqklrdl ewllqafete slnlhnisfy lsqpvsgcyq etensmaini ssdclqyfsl
       61 ilivlgpakt sllslrnlef hcveweleqv qnlgelldsn lnikqlvfmr nrfsedclse
      121 fsdilkrnga ikevmfcesh igtvgaifla salkvnesle elqiwedsig srgaeelskm
      181 ieansmlkll tifdsssita tplisavlar nrgmevhvws gesgdksskv veftpqnttl
      241 riykidvsga crvacalgmn stvssfdmtg vrlksrwake frwvleqnrs lkevtlsktc
      301 lkdkgivyva aglfknrhle rlhldgnwfs gvglehllcp lsrfsalqcq anitlrsvtf
      361 ggsrtkigrs gfaailhmlt tnetltrlai vddqsmrpdd ffrifkslek naslrclslq
      421 gckgvrgerl lqaimetlqi npwiedidla rtplhnmgka daiyhrlgqn gkpetepend
      481 llkdmpltep kccrvffcgq eyagkatlcn sisqnfsspk lpyieqvrtl vnpveqavrt
      541 vgmkiktfkd edakisiwnl agqhefyslh dlmfpghgsa sffliisslf rkpsnrepkt
      601 pveieedlqy wlrfivsnsk raiqqcmlpn vavvlthydk vnqtsqnlea tvnsiqklrd
      661 kfngyvdfyp tvftvdarss asvsklthhi rktsktvlqr vprvyelcnd liqilsdwrs
      721 enynkpamkw kefaelcqvk vpplrirsrr dnkekietrr ravatclhhi geviyfdelg
      781 flildcewfc gevlsqlikl evrrqssaen gfisrkelek ilraslqsqi pgmsskvfen
      841 leandlikmm mklelcyeqd psdpnsllli psileegrgk pqkwqlggad clyagrhlqc
      901 ddsshmfltp gffprlqvhl hnrimamknq hgatysleky lisiningih vrvelggqlg
      961 yyidilacst knltetlrli hqlivpaiqs lchgvtlien imrpecvqnl vppryrkaqy
     1021 vplqqlkqal lsvpaetmyd yqhtwdsvsd sgklvlragf dlardllsdd dfrevlhrry
     1081 hdlynlavel qvppennpde eenslsnave sgkvdpsfsg iakgvetvlq rlkiieqeir
     1141 dlkqeiqgmr yyehrlliel hrkvnylvnf nvhvegrkvp nmfyfvqten ysrrlvttvi
     1201 sgmtalrlhm lcefrremhv vedqvgcevm hvdntvvkcl apymtkfmkl vtfalkigah
     1261 laagmgnlip dlsrevahla dssvmygaag avaagaagsa amgringirn qnrrgdiqqd
     1321 lrsaqqwvvd flrdrrcstg kdiadkfglw rvryrddghi awicrrhmiv raneiievpi
//
LOCUS       XP_016707310             464 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707310
VERSION     XP_016707310.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851821.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..464
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=50483
     Region          93..200
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..464
                     /gene="LOC107922005"
                     /coded_by="XM_016851821.2:442..1836"
                     /db_xref="GeneID:107922005"
ORIGIN      
        1 mlwvilscql kkenhifepw gagcwevfgf livgsspwcf imdspqsvvs pfknsvvaep
       61 ekqkteffsr nsggllsngs evnkkeensi gvlevyvhqa rdihniciyh kqdvyaklcl
      121 tsdpestvst kiingggrnp vfndnlrlnv rtvdsslkie ifmmsrvrny ledqllgfal
      181 vplsevllkn gklekefsls stdlfhspag fvqlslayag lspevmaipa mprdvaadet
      241 vkdsetsece lekiefpdpi ianenqmmvs eyigiqcsnl dsesseslgt sdaesqissd
      301 mgarlmesfs tatvnsiqap kldsppssvs tngvsspsag assesfdgla asktstqehi
      361 sapkekavdi gdvdshssga qsdsivkpvv svniepeqkl vqqdivdmym ksmqqftesl
      421 akmklpldid sgptksenss ttdqkiqask ntgsrvfygs raff
//
LOCUS       XP_016707311             440 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707311
VERSION     XP_016707311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851822.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..440
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=47749
     Region          69..176
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..440
                     /gene="LOC107922005"
                     /coded_by="XM_016851822.2:129..1451"
                     /db_xref="GeneID:107922005"
ORIGIN      
        1 mlgsfwflnc sspwcfimds pqsvvspfkn svvaepekqk teffsrnsgg llsngsevnk
       61 keensigvle vyvhqardih niciyhkqdv yaklcltsdp estvstkiin gggrnpvfnd
      121 nlrlnvrtvd sslkieifmm srvrnyledq llgfalvpls evllkngkle kefslsstdl
      181 fhspagfvql slayaglspe vmaipamprd vaadetvkds etseceleki efpdpiiane
      241 nqmmvseyig iqcsnldses seslgtsdae sqissdmgar lmesfstatv nsiqapklds
      301 ppssvstngv sspsagasse sfdglaaskt stqehisapk ekavdigdvd shssgaqsds
      361 ivkpvvsvni epeqklvqqd ivdmymksmq qfteslakmk lpldidsgpt ksenssttdq
      421 kiqaskntgs rvfygsraff
//
LOCUS       XP_016707312             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707312
VERSION     XP_016707312.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851823.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=45728
     Region          52..159
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..423
                     /gene="LOC107922005"
                     /coded_by="XM_016851823.2:395..1666"
                     /db_xref="GeneID:107922005"
ORIGIN      
        1 mdspqsvvsp fknsvvaepe kqkteffsrn sggllsngse vnkkeensig vlevyvhqar
       61 dihniciyhk qdvyaklclt sdpestvstk iingggrnpv fndnlrlnvr tvdsslkiei
      121 fmmsrvrnyl edqllgfalv plsevllkng klekefslss tdlfhspagf vqlslayagl
      181 spevmaipam prdvaadetv kdsetsecel ekiefpdpii anenqmmvse yigiqcsnld
      241 sesseslgts daesqissdm garlmesfst atvnsiqapk ldsppssvst ngvsspsaga
      301 ssesfdglaa sktstqehis apkekavdig dvdshssgaq sdsivkpvvs vniepeqklv
      361 qqdivdmymk smqqftesla kmklpldids gptksensst tdqkiqaskn tgsrvfygsr
      421 aff
//
LOCUS       XP_016707313             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707313
VERSION     XP_016707313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851824.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=45728
     Region          52..159
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..423
                     /gene="LOC107922005"
                     /coded_by="XM_016851824.2:318..1589"
                     /db_xref="GeneID:107922005"
ORIGIN      
        1 mdspqsvvsp fknsvvaepe kqkteffsrn sggllsngse vnkkeensig vlevyvhqar
       61 dihniciyhk qdvyaklclt sdpestvstk iingggrnpv fndnlrlnvr tvdsslkiei
      121 fmmsrvrnyl edqllgfalv plsevllkng klekefslss tdlfhspagf vqlslayagl
      181 spevmaipam prdvaadetv kdsetsecel ekiefpdpii anenqmmvse yigiqcsnld
      241 sesseslgts daesqissdm garlmesfst atvnsiqapk ldsppssvst ngvsspsaga
      301 ssesfdglaa sktstqehis apkekavdig dvdshssgaq sdsivkpvvs vniepeqklv
      361 qqdivdmymk smqqftesla kmklpldids gptksensst tdqkiqaskn tgsrvfygsr
      421 aff
//
LOCUS       XP_016707314             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707314
VERSION     XP_016707314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851825.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=45728
     Region          52..159
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..423
                     /gene="LOC107922005"
                     /coded_by="XM_016851825.2:272..1543"
                     /db_xref="GeneID:107922005"
ORIGIN      
        1 mdspqsvvsp fknsvvaepe kqkteffsrn sggllsngse vnkkeensig vlevyvhqar
       61 dihniciyhk qdvyaklclt sdpestvstk iingggrnpv fndnlrlnvr tvdsslkiei
      121 fmmsrvrnyl edqllgfalv plsevllkng klekefslss tdlfhspagf vqlslayagl
      181 spevmaipam prdvaadetv kdsetsecel ekiefpdpii anenqmmvse yigiqcsnld
      241 sesseslgts daesqissdm garlmesfst atvnsiqapk ldsppssvst ngvsspsaga
      301 ssesfdglaa sktstqehis apkekavdig dvdshssgaq sdsivkpvvs vniepeqklv
      361 qqdivdmymk smqqftesla kmklpldids gptksensst tdqkiqaskn tgsrvfygsr
      421 aff
//
LOCUS       XP_016707463             480 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707463
VERSION     XP_016707463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851974.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="heterogeneous nuclear ribonucleoprotein 1
                     isoform X1"
                     /calculated_mol_wt=50916
     Region          <7..376
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     Region          8..78
                     /region_name="RRM1_hnRNPA_hnRNPD_like"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP
                     D subfamilies and similar proteins; cd12325"
                     /db_xref="CDD:409763"
     Site            order(9,11..14,36,38,47..49,51,73,76,78)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409763"
     Region          107..184
                     /region_name="RRM2_Hrp1p"
                     /note="RNA recognition motif 2 (RRM2) found in yeast
                     nuclear polyadenylated RNA-binding protein 4 (Hrp1p or
                     Nab4p) and similar proteins; cd12330"
                     /db_xref="CDD:409767"
     Site            order(109,111,136,138,149,151,177,179,181)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409767"
     CDS             1..480
                     /gene="LOC107922125"
                     /coded_by="XM_016851974.2:452..1894"
                     /db_xref="GeneID:107922125"
ORIGIN      
        1 mesdlgklfi ggiswdtdee rlkeyfrkyg evveamimrd rftgrargfg fivfadpava
       61 ervimdkhmi dgrtveakka vprddqniln rnmssitasp vpgrtkkifv gglassvtet
      121 dfknyfdqfg titdvvvmyd hntqrprgfg fitydsedav drvlhktfhe lkgklvevkr
      181 avpkelspgp arspvigyny glsrtanfln syaqgynlsp ltdlgvrmdg rfnplasgrt
      241 gfppfnnpgy gigmdmepgm npnfggssnf gnnlgygrli spyyggisnr yntpigygvg
      301 sgrndsnlss gtrdiwgngs lsnatnaasp ggflgtgrgs fgplgnsgvn wspsppiqsg
      361 gnapgytggi agfgsaddny glgggghgrn ggtvtaptss fagptvnfkg sygdlyrsgs
      421 vygdstwqst tadldgsssf sygigsvsid gtagssedyv gsygvanrqs srgnilfkqs
//
LOCUS       XP_016707465             476 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707465
VERSION     XP_016707465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851976.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="heterogeneous nuclear ribonucleoprotein 1
                     isoform X2"
                     /calculated_mol_wt=50341
     Region          <7..376
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     Region          8..78
                     /region_name="RRM1_hnRNPA_hnRNPD_like"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP
                     D subfamilies and similar proteins; cd12325"
                     /db_xref="CDD:409763"
     Site            order(9,11..14,36,38,47..49,51,73,76,78)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409763"
     Region          107..184
                     /region_name="RRM2_Hrp1p"
                     /note="RNA recognition motif 2 (RRM2) found in yeast
                     nuclear polyadenylated RNA-binding protein 4 (Hrp1p or
                     Nab4p) and similar proteins; cd12330"
                     /db_xref="CDD:409767"
     Site            order(109,111,136,138,149,151,177,179,181)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409767"
     CDS             1..476
                     /gene="LOC107922125"
                     /coded_by="XM_016851976.2:445..1875"
                     /db_xref="GeneID:107922125"
ORIGIN      
        1 mesdlgklfi ggiswdtdee rlkeyfrkyg evveamimrd rftgrargfg fivfadpava
       61 ervimdkhmi dgrtveakka vprddqniln rnmssitasp vpgrtkkifv gglassvtet
      121 dfknyfdqfg titdvvvmyd hntqrprgfg fitydsedav drvlhktfhe lkgklvevkr
      181 avpkelspgp arspvigyny glsrtanfln syaqgynlsp ltdlgvrmdg rfnplasgrt
      241 gfppfnnpgy gigmdmepgm npnfggssnf gnnlgygrli spyyggisnr yntpigygvg
      301 sgrndsnlss gtrdiwgngs lsnatnaasp ggflgtgrgs fgplgnsgvn wspsppiqsg
      361 gnapgytggi agfgsaddny glgggghgrn ggtvtaptss fagptvnfkg sygdlyrsgs
      421 vygdstwqst tadldgsssf sygigsvsid gtagssedyv gsygvanrqs srgiaa
//
LOCUS       XP_016707177             592 aa            linear   PLN 06-AUG-2024
DEFINITION  probably inactive receptor-like protein kinase At5g41680 [Gossypium
            hirsutum].
ACCESSION   XP_016707177
VERSION     XP_016707177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851688.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..592
                     /product="probably inactive receptor-like protein kinase
                     At5g41680"
                     /calculated_mol_wt=66654
     Region          <83..>175
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          94..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          298..551
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(298..300,303,305,317,319,347,363..366,418,422..423,
                     425,435..436)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..592
                     /gene="LOC107921853"
                     /coded_by="XM_016851688.2:758..2536"
                     /db_xref="GeneID:107921853"
ORIGIN      
        1 mmsgessrkm qrregfnmfv kgliciavvp llatvcmgge lsesqsllsf irsvdpqrkl
       61 gayqwnefst spclvksevv kcnlqgtsii eirleslnls gvinadalck lqslevlsla
      121 rnqihgtipr sisyckrlry lnlssnslsg rvswstltkl kylksldisn nhftnqefeh
      181 vykysqlnat vqneivagtp gesnnnksnt llwtlvplfl glgfffmfly cmgkilgkrr
      241 kaneipmaik esplkhvpvn aiqelkpegr hqelvffved herfklddll dasanlrsqs
      301 lytslykvil knnatyavkr lkklqvsfke feqtmrrign lkhrnvlplv gyscadtekl
      361 lfykyqsngs llsllqgyie gkkefpwrfr ltiatgiarg lafiyqssnd qdsiphgnlk
      421 lsnillgenm epliseygis rlldpkkncl vssngymape kslseqgdvf sfgiillell
      481 tgktvektgv dlpkwvgsmv reewtgevfg kdvtkdsmqw afpllnialk cvshspkdrp
      541 ttaevlqkid ealfahedrt vssmsswesg prdccmlhsv ipetwdtpgs ny
//
LOCUS       XP_040942971             565 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 20 [Gossypium hirsutum].
ACCESSION   XP_040942971
VERSION     XP_040942971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087037.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..565
                     /product="probable WRKY transcription factor 20"
                     /calculated_mol_wt=60950
     Region          221..275
                     /region_name="WRKY"
                     /note="WRKY DNA -binding domain; pfam03106"
                     /db_xref="CDD:460808"
     Region          383..440
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..565
                     /gene="LOC107921995"
                     /coded_by="XM_041087037.1:191..1888"
                     /db_xref="GeneID:107921995"
ORIGIN      
        1 meeqklasss sssssavaaa tmqhdlsgsa gsggaryklv apaklpisrs acitippgls
       61 pssflespvl lsdvkaepsp ttgslikpqa vhasvacsty sattacsnaf dernpstfef
      121 rphprsnmap adldpqrseq srqiqiqyqa vsfnssasvk semagssnvl slsvpvhtat
      181 svasahagvd aeelnqignp nggmpsgqsd hrgvgpvsse dgynwrkygq khvkgcefpr
      241 syykcthpnc evkklfersh dgqiteiiyk gthdhpkpqp srryssgnim sgqeersdkv
      301 sslngrddks ycgygqmahs iepnstadis pvtanddnld eiedddpfsk rrkmdggidi
      361 tpvvkpirep rvvvqtvsev dilddgyrwr kygqkvvrgn pnprsyykct nagcpvrkhv
      421 erashdpkav ittyegkhnh dvptaktgsh dtagavamcg psrirseend aisldlgvgi
      481 ssvpehasne hqqlhselvq srprtggssf kfvqptmmay ygalngsmnq yvsrenpseg
      541 rgveitplnh syafpqsmgr iltgp
//
LOCUS       XP_016707292             565 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 20 [Gossypium hirsutum].
ACCESSION   XP_016707292
VERSION     XP_016707292.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851803.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..565
                     /product="probable WRKY transcription factor 20"
                     /calculated_mol_wt=60950
     Region          221..275
                     /region_name="WRKY"
                     /note="WRKY DNA -binding domain; pfam03106"
                     /db_xref="CDD:460808"
     Region          383..440
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..565
                     /gene="LOC107921995"
                     /coded_by="XM_016851803.2:472..2169"
                     /db_xref="GeneID:107921995"
ORIGIN      
        1 meeqklasss sssssavaaa tmqhdlsgsa gsggaryklv apaklpisrs acitippgls
       61 pssflespvl lsdvkaepsp ttgslikpqa vhasvacsty sattacsnaf dernpstfef
      121 rphprsnmap adldpqrseq srqiqiqyqa vsfnssasvk semagssnvl slsvpvhtat
      181 svasahagvd aeelnqignp nggmpsgqsd hrgvgpvsse dgynwrkygq khvkgcefpr
      241 syykcthpnc evkklfersh dgqiteiiyk gthdhpkpqp srryssgnim sgqeersdkv
      301 sslngrddks ycgygqmahs iepnstadis pvtanddnld eiedddpfsk rrkmdggidi
      361 tpvvkpirep rvvvqtvsev dilddgyrwr kygqkvvrgn pnprsyykct nagcpvrkhv
      421 erashdpkav ittyegkhnh dvptaktgsh dtagavamcg psrirseend aisldlgvgi
      481 ssvpehasne hqqlhselvq srprtggssf kfvqptmmay ygalngsmnq yvsrenpseg
      541 rgveitplnh syafpqsmgr iltgp
//
LOCUS       XP_016707293             539 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like transcription factor PAT1 [Gossypium hirsutum].
ACCESSION   XP_016707293
VERSION     XP_016707293.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851804.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707293.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..539
                     /product="scarecrow-like transcription factor PAT1"
                     /calculated_mol_wt=59734
     Region          168..538
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..539
                     /gene="LOC107921996"
                     /coded_by="XM_016851804.2:344..1963"
                     /db_xref="GeneID:107921996"
ORIGIN      
        1 mqtsqkhkit gkcidwpvqe lesycwppnq slepyqsgsd dgsnsvqhsv pnleryctld
       61 ssssmqnsss tasfspdgsp vsqqnytypl dlhhspentc aspisgscvi dnendlglmi
      121 rqletamlgi dsgdldlhai aasgratkvs veaerwkymk emiargdlke llctcakaie
      181 sndmymtdcl iaqlrqmvsv sgepmqrlga ylleglvarl assgssiyka lrckepaspe
      241 llsymhilye icpyfkfgyi sangaiaeam keesrvhiid fqiaqgsqwl tlinalagrs
      301 ggppsiritg iddptsafar gggleivgqr lrklaesckv pfefhaaais gtevqlenlg
      361 iqpgeaiavn fammlhhmpd esvdtqnhrd rllrlaksls pkvvtlvehe antntapfip
      421 rfletmgyfs sifesidvsl prehkerinv eqhclareiv niiacegqer veryelfgkw
      481 rsrfimagft psplspfvna tiktllqsyc dkytleerdg vlylgwmdra iiascawrc
//
LOCUS       XP_016706513             423 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKIP23 [Gossypium hirsutum].
ACCESSION   XP_016706513
VERSION     XP_016706513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851024.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="F-box protein SKIP23"
                     /calculated_mol_wt=48989
     Region          7..354
                     /region_name="PLN03215"
                     /note="ascorbic acid mannose pathway regulator 1;
                     Provisional"
                     /db_xref="CDD:178754"
     CDS             1..423
                     /gene="LOC107921150"
                     /coded_by="XM_016851024.2:385..1656"
                     /db_xref="GeneID:107921150"
ORIGIN      
        1 mapcqswsel pkelisyiak cldtrtdvlr fravccswra svplppkspk lpmhfslpvn
       61 dprkpivsav isqtvvyria qpgfhahpnr kscfirveet eqenkfrlvn pfserlikhm
      121 panfpkeinh lnfrveeltk gfsirllkdd gssdlhdnnf wtrklklasd fdssykaisi
      181 ssgqlrrarl dtyttdihwc sldtevhyrd itnfdgkffm vniygvilgm desfytldev
      241 htsleqkdwe ceryfvescg hlylvvrdfl icptlvqyny tldafmteak danvpvkfkv
      301 ykripsgdqr srfcwvevnd lgdraffvst dcsfsfltrd ytgcggncii yvdeidnver
      361 lrkfepiead ndkeglkqlk ngkvrlynla drssaplalf phyldmfwpp ptwlkwdqgp
      421 sna
//
LOCUS       XP_016706514             140 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706514
VERSION     XP_016706514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851025.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..140
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15366
     CDS             1..140
                     /gene="LOC107921151"
                     /coded_by="XM_016851025.2:38..460"
                     /db_xref="GeneID:107921151"
ORIGIN      
        1 mevslcisps ltppvslpqs kptftrysnp tvkvtsiqrc kslirnsqrl ttkvaanihd
       61 vsvvadparv ditwqivvga lagvtpffva giefskriia qrrcgecrgs glvfrgndyf
      121 kcpecggflp wqswkrfftg
//
LOCUS       XP_040942972             587 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 18 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040942972
VERSION     XP_040942972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087038.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..587
                     /product="zinc finger CCCH domain-containing protein 18
                     isoform X1"
                     /calculated_mol_wt=66403
     Region          212..230
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          263..335
                     /region_name="OST-HTH"
                     /note="OST-HTH/LOTUS domain; pfam12872"
                     /db_xref="CDD:463735"
     Region          364..433
                     /region_name="RRM_AtC3H46_like"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana zinc finger CCCH domain-containing protein 46
                     (AtC3H46) and similar proteins; cd12458"
                     /db_xref="CDD:409891"
     CDS             1..587
                     /gene="LOC107922419"
                     /coded_by="XM_041087038.1:1..1764"
                     /db_xref="GeneID:107922419"
ORIGIN      
        1 mcvgkskfst lefsekqkks gvikqmefsd ytqilfnrik kidpenvski igylllqdyg
       61 dqeivqlatc pdivmqeviy ksklelqqlp fksasppisp smnsvptlel psqfssfspp
      121 vspsvssklf lsprsvqvts pywdqqlvak hspdfttsgy ldsvsdlqah tqllsledpi
      181 efvenggfsm anhdvkvgrr yqnlpsfpvk tchyfnkgyc khgsncryfh gqvsdnfpqm
      241 fvhnsmdavs edhvmslekl evelvellkt krgdpvsias lpllyyekyg kvlqadgylt
      301 esqrhgkagy sltkllarlk ntirvidrph gqhsvilaed apkymenrnd rndpgpivsg
      361 srqiyltfpa estfseddvs nyfsnygqve dvripcqqkr mfgfvtfvsa dtvkmilakg
      421 nphyvcgarv lvkpyreksk lvdrkyperi espmfysphy idmeselqsi prgyatsrlf
      481 kkqfmedpeq ifqpprrrls dmhlaqkpla nqsffahsmn elkvvddqln fpsaefnyll
      541 ealntstasd ekikhveadn ndqesdglnl pdspftsaia sgisavi
//
LOCUS       XP_016707942             562 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 18 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707942
VERSION     XP_016707942.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852453.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707942.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..562
                     /product="zinc finger CCCH domain-containing protein 18
                     isoform X2"
                     /calculated_mol_wt=63602
     Region          187..205
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          238..310
                     /region_name="OST-HTH"
                     /note="OST-HTH/LOTUS domain; pfam12872"
                     /db_xref="CDD:463735"
     Region          339..408
                     /region_name="RRM_AtC3H46_like"
                     /note="RNA recognition motif (RRM) found in Arabidopsis
                     thaliana zinc finger CCCH domain-containing protein 46
                     (AtC3H46) and similar proteins; cd12458"
                     /db_xref="CDD:409891"
     CDS             1..562
                     /gene="LOC107922419"
                     /coded_by="XM_016852453.2:131..1819"
                     /db_xref="GeneID:107922419"
ORIGIN      
        1 mefsdytqil fnrikkidpe nvskiigyll lqdygdqeiv qlatcpdivm qeviykskle
       61 lqqlpfksas ppispsmnsv ptlelpsqfs sfsppvspsv ssklflsprs vqvtspywdq
      121 qlvakhspdf ttsgyldsvs dlqahtqlls ledpiefven ggfsmanhdv kvgrryqnlp
      181 sfpvktchyf nkgyckhgsn cryfhgqvsd nfpqmfvhns mdavsedhvm sleklevelv
      241 ellktkrgdp vsiaslplly yekygkvlqa dgyltesqrh gkagysltkl larlkntirv
      301 idrphgqhsv ilaedapkym enrndrndpg pivsgsrqiy ltfpaestfs eddvsnyfsn
      361 ygqvedvrip cqqkrmfgfv tfvsadtvkm ilakgnphyv cgarvlvkpy reksklvdrk
      421 yperiespmf ysphyidmes elqsiprgya tsrlfkkqfm edpeqifqpp rrrlsdmhla
      481 qkplanqsff ahsmnelkvv ddqlnfpsae fnyllealnt stasdekikh veadnndqes
      541 dglnlpdspf tsaiasgisa vi
//
LOCUS       XP_016707601             661 aa            linear   PLN 06-AUG-2024
DEFINITION  putative DUF21 domain-containing protein At3g13070, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016707601
VERSION     XP_016707601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..661
                     /product="putative DUF21 domain-containing protein
                     At3g13070, chloroplastic"
                     /calculated_mol_wt=73506
     Region          154..599
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
     CDS             1..661
                     /gene="LOC107922210"
                     /coded_by="XM_016852112.2:205..2190"
                     /db_xref="GeneID:107922210"
ORIGIN      
        1 memalessil skpnffssak ssafllfnrn fkyppkflsk tnhypasiis sfpnprvvka
       61 fgvpktgtfg sqarlgslie eneelgsyqn lifvkrgilv amvcgvlafg ckrvfavegv
      121 vnagygvigq silllknawp klsmllkvfk eqglvltall glsaffsmae taittlwpwk
      181 irelaekese dgvfkmlrsd vtrflttili gttvvnigat alvtdaatai fgeagvsaat
      241 gvmtvailll teitpksiav hnptevarfv vrpvawlsvi lypvgrvvtf lsmgmlkifg
      301 lkgksepyvt edelklmlrg aelsgaieee eqdmienvle ikdthvrevm tplvdvvaid
      361 asstlvefhn lwlthqysrv pvfeqrvdni vgiayamdll dyvtkgevle sttvgdmahk
      421 payfvpdsml vwnllrefri rkvhmavvln eyggtvglvt ledvveeivg eifdendsne
      481 eiqkktgyiv mraegifdvd antsidqlse dlnikmpeeh qyetvsgfvc eafgyiprtg
      541 esikvvlekg neeeddenae agsdqqdmke rhqiykleil agnarkvsav rferineeal
      601 lddtavtpmi skiikrkwss dedsnngnyn edtfekrqee disdhyviad ynedkdspne
      661 q
//
LOCUS       XP_016707602             216 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat receptor-like serine/threonine-protein kinase
            SKM1 [Gossypium hirsutum].
ACCESSION   XP_016707602
VERSION     XP_016707602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..216
                     /product="leucine-rich repeat receptor-like
                     serine/threonine-protein kinase SKM1"
                     /calculated_mol_wt=24081
     Region          <3..>204
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          19..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..216
                     /gene="LOC107922212"
                     /coded_by="XM_016852113.2:1..651"
                     /db_xref="GeneID:107922212"
ORIGIN      
        1 mlnsftgkip naeaslprlq vlqlwsnqls geipnylgtq sdltildlsm nnlsgkipde
       61 lchsghlvtl glfsnslqgq iprslntcks leaihlrknr sgndegivel dmfsnlpnlr
      121 fldlsyngvs vsssinssyt wpnlqylsla scslnefprf lkgskhlmsl dlsdnkihgq
      181 npkwilnkgl dtlsylnlsh nflthierlp wenent
//
LOCUS       XP_040942973             505 aa            linear   PLN 06-AUG-2024
DEFINITION  tabersonine 6,7-epoxidase [Gossypium hirsutum].
ACCESSION   XP_040942973
VERSION     XP_040942973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087039.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..505
                     /product="tabersonine 6,7-epoxidase"
                     /calculated_mol_wt=57500
     Region          69..494
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(106,131,135,143,188,302,305..306,309..310,370,
                     373..374,376,436..439,442..446,449..450)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(210,214,239,301,304..305,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..505
                     /gene="LOC121213835"
                     /coded_by="XM_041087039.1:2107..3624"
                     /db_xref="GeneID:121213835"
ORIGIN      
        1 mefqfpcvpl itflifffti vrilkisska kkpnlnklpp gpwklplign lhqlftsfph
       61 htlrdlsnky galmqlqlge vptvvissar vaeqvfkthd tifsqrphvl acevmsynck
      121 aivftpygny wkqmrkictm ellsptrvqs fqsirteevt dfiksialse gsainlseki
      181 fslsygitar atfgkktksq eefirivket nklsgaicla dmypssgvlk lisgtrikae
      241 klhqasdkil enivnehkek rnkadhqgve adlidvllql qqqddlefpl gnnsikavmk
      301 difaagsets attvewamse llknpklmkk aqnevrrvfg enitslneek iqelkflrli
      361 vketlrlhpp allilrqsre ncvingyeia akakvlvnaw aiqrdpfywk daeefyperf
      421 sensmdfrgk nfeyipfgag rricpgilfg ihgielplas llyhfdwklp ngmkfedlem
      481 tesfgltarr kddlflipvp ycalk
//
LOCUS       XP_040942974             508 aa            linear   PLN 06-AUG-2024
DEFINITION  premnaspirodiene oxygenase [Gossypium hirsutum].
ACCESSION   XP_040942974
VERSION     XP_040942974.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087040.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="premnaspirodiene oxygenase"
                     /calculated_mol_wt=57846
     Region          68..495
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(105,130,134,142,187,303,306..307,310..311,370,
                     374..375,377,437..440,443..447,450..451)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(210,214,239,302,305..306,375)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..508
                     /gene="LOC121213838"
                     /coded_by="XM_041087040.1:82..1608"
                     /db_xref="GeneID:121213838"
ORIGIN      
        1 mdiqfkllpl sftflafifm vlklwmrskk kdspknlppa plklplighl hllmvslphh
       61 rltelakrhg slmhlqlgel shivvsspea akevmkthdi nfanrphlla aeimlynfsd
      121 igftpygshw rqlrkvctle llstkrvqsf rsireeevss litsifcntg seinfgellc
      181 nlsynitlrt tlvgrcklqh etfipivkef vealggfsit dlfpsikllp misgmrakle
      241 rchhdldmml esiieehras nanlgnsdde tddlldvlln lqdhgglefp lttdnikavi
      301 ldmliagtet sstavewams emmknprile kaqaevrqvy drtrevnesd lhelkylklv
      361 iketlrlhpp lplliprens erceingyei paktkvivna waigrdsnyw seaerfnper
      421 fihssvdykg anfefipfga grrmcpgmsy gmavvelsla qllyhfdwkl pngmknedld
      481 mteafgasvr rksdlylipi pyrpscaq
//
LOCUS       XP_016706317             502 aa            linear   PLN 06-AUG-2024
DEFINITION  desmethyl-deoxy-podophyllotoxin synthase [Gossypium hirsutum].
ACCESSION   XP_016706317
VERSION     XP_016706317.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850828.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706317.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..502
                     /product="desmethyl-deoxy-podophyllotoxin synthase"
                     /calculated_mol_wt=56816
     Region          68..490
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(105,130,134,142,187,298,301..302,305..306,365,
                     369..370,372,432..435,438..442,445..446)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(209,213,238,297,300..301,370)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..502
                     /gene="LOC107920982"
                     /coded_by="XM_016850828.2:274..1782"
                     /db_xref="GeneID:107920982"
ORIGIN      
        1 medqffsfpi lftfsifllm lvrlgkrlrs nktlnlppgp wklpvigslh hlaagplphq
       61 tlrdmakryg sltylqlgel ptivvscpqt aaevmrthdi ifasrpsllt stiltynatd
      121 vafapygdyw rqlrkicvle mlslkrvqsf tpireeevsk lvraisskag spinlsqmly
      181 fltfeivlkt afggkckerd eftvlfrdvl rlgegfnvad lfpslkffey ltglrpkler
      241 lhqkldkifa svinehkask gvegeaddlv dvllnlqeng dlefplttdn ikavildlfi
      301 agsdtsfttl ewamsemlkn prvmkkaqae vrqvfnrkgn vdseglhele ylklvisetl
      361 rlhpplplll precsrgcki ngydipvksr viinawaiar nteywseaet fyperfvnsp
      421 idykganfel ipfgagrrmc pgmlygmanv elplahllyh fnwklaggvk medldmdevf
      481 gavvrrkndl clvptpyssp ks
//
LOCUS       XP_016706456             509 aa            linear   PLN 06-AUG-2024
DEFINITION  desmethyl-deoxy-podophyllotoxin synthase isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706456
VERSION     XP_016706456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850967.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..509
                     /product="desmethyl-deoxy-podophyllotoxin synthase isoform
                     X1"
                     /calculated_mol_wt=57646
     Region          65..491
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(102,127,131,139,184,299,302..303,306..307,366,
                     370..371,373,433..436,439..443,446..447)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(206,210,235,298,301..302,371)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..509
                     /gene="LOC107921099"
                     /coded_by="XM_016850967.2:29..1558"
                     /db_xref="GeneID:107921099"
ORIGIN      
        1 mdkllplsft flvfifmvlk lwmrskiket pknlppapwk lpiighlhll ifalphqrla
       61 elakrhgsvm qlqlgelshv ivssseaake vmkthdinfa nrpfllgaei vlynlsdiaf
      121 apygscwrql rkvctlells vkrvqsfrsv reeqvsslir sifsktgkei nlgemlcnls
      181 yniilrtafa grckkheafi sflkkfveam agfniadlfp sikflpdlsg mraelerfhh
      241 didtmlesii qehrdssanp edsvdvtedl vdvllnlqdh gglefpltin nikavildil
      301 lggtetsatl aewamsemmk nprilgkaqa evrelydktg dvnesnlhel kylklviket
      361 lrlhpplpll iprenserce ingyeipakt rvivnawaig rdsncwneae rfyperfidg
      421 svdykganfe fipfgagrri cpgmsygmav velslaklls hfdwklpngm knedldmtea
      481 fgasvgrrse lyliptphhl rmtverdgs
//
LOCUS       XP_016706457             475 aa            linear   PLN 06-AUG-2024
DEFINITION  desmethyl-deoxy-podophyllotoxin synthase isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706457
VERSION     XP_016706457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850968.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..475
                     /product="desmethyl-deoxy-podophyllotoxin synthase isoform
                     X2"
                     /calculated_mol_wt=53995
     Region          65..457
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(93,97,105,150,265,268..269,272..273,332,336..337,
                     339,399..402,405..409,412..413)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(172,176,201,264,267..268,337)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..475
                     /gene="LOC107921099"
                     /coded_by="XM_016850968.2:29..1456"
                     /db_xref="GeneID:107921099"
ORIGIN      
        1 mdkllplsft flvfifmvlk lwmrskiket pknlppapwk lpiighlhll ifalphqrla
       61 elakrhgsvm qlqleivlyn lsdiafapyg scwrqlrkvc tlellsvkrv qsfrsvreeq
      121 vsslirsifs ktgkeinlge mlcnlsynii lrtafagrck kheafisflk kfveamagfn
      181 iadlfpsikf lpdlsgmrae lerfhhdidt mlesiiqehr dssanpedsv dvtedlvdvl
      241 lnlqdhggle fpltinnika vildillggt etsatlaewa msemmknpri lgkaqaevre
      301 lydktgdvne snlhelkylk lviketlrlh pplpllipre nserceingy eipaktrviv
      361 nawaigrdsn cwneaerfyp erfidgsvdy kganfefipf gagrricpgm sygmavvels
      421 lakllshfdw klpngmkned ldmteafgas vgrrselyli ptphhlrmtv erdgs
//
LOCUS       XP_040942975             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040942975
VERSION     XP_040942975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087041.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..135
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15142
     CDS             1..135
                     /gene="LOC107920985"
                     /coded_by="XM_041087041.1:259..666"
                     /db_xref="GeneID:107920985"
ORIGIN      
        1 mtkqtqmtvf iiavmflcrf avivprstrf frskdsldla stiaelnkem esvfgepppd
       61 glansgnrsc maqdahhnsh vilvlclknl lfevplilqq ltnsllemee ekaiqcarek
      121 asieaieekr klyns
//
LOCUS       XP_016706322              95 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706322
VERSION     XP_016706322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..95
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=10484
     CDS             1..95
                     /gene="LOC107920985"
                     /coded_by="XM_016850833.2:259..546"
                     /db_xref="GeneID:107920985"
ORIGIN      
        1 mtkqtqmtvf iiavmflcrf avivprstrf frskdsldla stiaelnkem esvfgepppd
       61 glansgnrsc maqdahhnsh vilvlclknl lfegk
//
LOCUS       XP_016707812             384 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: serine acetyltransferase 1, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016707812
VERSION     XP_016707812.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852323.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707812.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..384
                     /product="LOW QUALITY PROTEIN: serine acetyltransferase 1,
                     chloroplastic"
                     /calculated_mol_wt=41618
     Region          14..384
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(250,252,267,301,331,334,336)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:100045"
     Site            order(266..267,286..287,293..294,301..302,313,328,
                     330..331,334,336,344,349)
                     /site_type="active"
                     /db_xref="CDD:100045"
     Site            order(266..267,293,301..302)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100045"
     Site            order(286..287,293..294,313,328,330..331,334,336,344,349)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:100045"
     CDS             1..384
                     /gene="LOC107922331"
                     /coded_by="XM_016852323.2:107..1261"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:107922331"
ORIGIN      
        1 mkilgtsrpl plplynnspp fshphlspsi fpsthyshkf sqsmaacidi srttdssqls
       61 qrpnisqpde vlyeygsfcr stfpnnvssv plnknhtkti ptrksvdsle ekeevgalwl
      121 kmkeearlda eqepilsnyy yssifshnsf esalanhlsi klgnpslsss tlfdiimavl
      181 vedqgimiav kedlkaaker dpacisyvhc flnfkgflac qshrvahnlw cqgrkvlall
      241 iqnrvsqvfd vdihpgakig sgilfdhatg vivgetavig nnvsilhnvt lggtgkasgd
      301 rhpkigdgvl igagtcilgn ikigdgakig agsvvlkdvp prttavgnpa rlvggrenpi
      361 kldkipsftm dhtshiaews dyvi
//
LOCUS       XP_016706458             187 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S10, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706458
VERSION     XP_016706458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850969.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..187
                     /product="30S ribosomal protein S10, chloroplastic"
                     /calculated_mol_wt=20584
     Region          88..187
                     /region_name="rpsJ"
                     /note="30S ribosomal protein S10; Reviewed; PRK00596"
                     /db_xref="CDD:179076"
     CDS             1..187
                     /gene="LOC107921100"
                     /coded_by="XM_016850969.2:181..744"
                     /db_xref="GeneID:107921100"
ORIGIN      
        1 maississtl ipslpiqnas spkvkftfls hspplsfnhl klcnnsqlsq sptklfaspe
       61 aledtpevgv sevpsssyva eadkaapkqk iriklrsywv pliedsckqi idaarttnak
      121 tmgpvplptk kriycvlksp hvhkdarfhf eirthqrlid ilyptaqtid slmqldlpag
      181 vdvevkl
//
LOCUS       XP_016707364             682 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707364
VERSION     XP_016707364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851875.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..682
                     /product="uncharacterized protein"
                     /calculated_mol_wt=76608
     Region          162..291
                     /region_name="BAH_plant_1"
                     /note="BAH, or Bromo Adjacent Homology domain,
                     plant-specific sub-family with unknown function. BAH
                     domains are found in a variety of proteins playing roles
                     in transcriptional silencing and the remodeling of
                     chromatin. It is assumed that in most or all of these...;
                     cd04721"
                     /db_xref="CDD:240072"
     Region          384..459
                     /region_name="Agenet"
                     /note="Agenet domain; pfam05641"
                     /db_xref="CDD:461700"
     Region          468..523
                     /region_name="Agenet"
                     /note="Tudor-like domain present in plant sequences;
                     smart00743"
                     /db_xref="CDD:214798"
     CDS             1..682
                     /gene="LOC107922045"
                     /coded_by="XM_016851875.2:1065..3113"
                     /db_xref="GeneID:107922045"
ORIGIN      
        1 msgnghcfve wkeefvsqer gnrvvhyflk dsagesirav igtersvrhm fyivaeefvk
       61 vygaehsiha gfkwrsrrev vdwltsmlsk qhlegdrsks pkhdtllalr spdcamieis
      121 arkalqddms hfsrnlngqs sdivwsgsaw tcgkhlkhfp afcrsgttia vqsfvfvmak
      181 genhylayle dmyedkrgqk kvkvrwfhht kevkgvipvr nphpkevfit pysqvisaec
      241 vdglasvltr ehyekclavf pdaflarvhv csrqfrsnkv kpfdlsklrg yfdqpilscl
      301 sstlssepes mshglheeee eqsaganvkl gnkrtrtnnr tssnhlvtye tsckkikyal
      361 sgkrlpslkh aesqycygsl fkvdekiell cqdsgirgcw frctvlqvsr kqmkvqyddv
      421 qdedgygnle ewvpifklam pdklgmrysg rqtvrpapps skkelavelg vavdawwsdg
      481 wwegvvtgvn ssgddnfqvy fpgenlsmni hkkglrisrd wdgdhwidid arpdilslis
      541 dvispdmdtk vsmsttivmd akhdggtmpv eavaakiiae gekpelafqd cfdnlvedad
      601 ckepasskde kdgdasdckk pppsengkna daddastihd klngmdgnde innndddeeg
      661 kieaedgkeq nskstelmea at
//
LOCUS       XP_016707365             359 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase QRT1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707365
VERSION     XP_016707365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851876.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="pectinesterase QRT1 isoform X1"
                     /calculated_mol_wt=40062
     Region          7..359
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..359
                     /gene="LOC107922046"
                     /coded_by="XM_016851876.2:275..1354"
                     /db_xref="GeneID:107922046"
ORIGIN      
        1 meyncslvtv vvvflcgfrv cfsltsdvhv knfiswddik vdehqtrlsd srvnhnrsrv
       61 ivvnknggad svtvqgaidm vpenntrrvk iyilpgiyre kvtvpkckpy isfvgnagqm
      121 sntiiswndk asdkdsngin lgtyrsasvt iesdyfcatd itfentvvqt pgepgmqava
      181 lrisgdkamf ykvkvvgtqd tlldeigshy fyqchiqgsv dfifgksrsl yqdcviesta
      241 vrsgaiaahr rdspdddtgf sfvnckingt griylgrawg nysraiysnc yfdniinpag
      301 wtdwndplrq ktvvfgefqc rgtganttgr vpwskklsfa eakpfldmkf idgpqwlrl
//
LOCUS       XP_016707366             316 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase QRT1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707366
VERSION     XP_016707366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851877.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="pectinesterase QRT1 isoform X2"
                     /calculated_mol_wt=35263
     Region          7..311
                     /region_name="Pectinesterase"
                     /note="cl29893"
                     /db_xref="CDD:421944"
     CDS             1..316
                     /gene="LOC107922046"
                     /coded_by="XM_016851877.2:292..1242"
                     /db_xref="GeneID:107922046"
ORIGIN      
        1 meyncslvtv vvvflcgfrv cfsltsdvhv knfiswddik vdehqtrlsd srvnhnrsrv
       61 ivvnknggad svtvqgaidm vpenntrrvk iyilpgiyre kvtvpkckpy isfvgnagqm
      121 sntiiswndk asdkdsngin lgtyrsasvt iesdyfcatd itfentvvqt pgepgmqava
      181 lrisgdkamf ykvkvvgtqd tlldeigshy fyqchiqgsv dfifgksrsl yqdcviesta
      241 vrsgaiaahr rdspdddtgf sfvnckingt griylgrawg nysraiysnc yfdniinpag
      301 wtdwndplrq kynlhs
//
LOCUS       XP_016707579             351 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 11 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707579
VERSION     XP_016707579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852090.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..351
                     /product="zinc transporter 11 isoform X1"
                     /calculated_mol_wt=37534
     Region          54..347
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..351
                     /gene="LOC107922199"
                     /coded_by="XM_016852090.2:137..1192"
                     /db_xref="GeneID:107922199"
ORIGIN      
        1 mklsrflfff flylslfisv tchggshadg ddddddkage rnephdlrsk slilvkvwcl
       61 ilvfvgtfvg gvspyflkwn qgflvlgtqf aggvflgtam mhflsdanet fgdlttkeyp
      121 lafmlacagy lltmladcvi syvygkgkns cnngdlelqg aersktnphg qgdppvgngt
      181 dttcaqsssl tsassfgdsv llivalcfhs vfegiaigva eteadawkal wtislhkifa
      241 aiamgiallr mipdrpllsc iayafafais spvgvaigiv idattqgava dwifaismgl
      301 acgvfiyvsi nhllakgyap qktvsvnrph hkflsvllgv gviavvmiwd t
//
LOCUS       XP_016707580             340 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 11 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707580
VERSION     XP_016707580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852091.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="zinc transporter 11 isoform X2"
                     /calculated_mol_wt=36486
     Region          54..336
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..340
                     /gene="LOC107922199"
                     /coded_by="XM_016852091.2:132..1154"
                     /db_xref="GeneID:107922199"
ORIGIN      
        1 mklsrflfff flylslfisv tchggshadg ddddddkage rnephdlrsk slilvkvwcl
       61 ilvfvgtfvg gvspyflkwn qgflvlgtqf aggvflgtam mhflsdanet fgdlttkeyp
      121 lafmlacagy lltmladcvi syvygkgkns cnngdlelqg aersktnphg qgdppssslt
      181 sassfgdsvl livalcfhsv fegiaigvae teadawkalw tislhkifaa iamgiallrm
      241 ipdrpllsci ayafafaiss pvgvaigivi dattqgavad wifaismgla cgvfiyvsin
      301 hllakgyapq ktvsvnrphh kflsvllgvg viavvmiwdt
//
LOCUS       XP_016707581             329 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707581
VERSION     XP_016707581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852092.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36129
     CDS             1..329
                     /gene="LOC107922200"
                     /coded_by="XM_016852092.2:215..1204"
                     /db_xref="GeneID:107922200"
ORIGIN      
        1 magiailldl yqkkpsfcsp qsfhssglfs asaaaasaaa tvaagtpfas rflfgypkvs
       61 hcdagavlpe hyisntqrss edffkndalk ysvkeykiel kplfsafelr pfalttlrsf
      121 llfylpllep slnieedeed fphdsteerr vdlvvplkks vkqiihettv vttrrilerl
      181 aviyvsqrma wkllkdvpks avrksqrgmp atvylfrvsr ttfrghllgv aaawivqtgi
      241 eiyrcfsrit nsdesdeanv tvrakllgkk isgitircga slifasigag icatlfrpsv
      301 gqwigcaagd lagpiivsvc lenvfhvdl
//
LOCUS       XP_016706358             371 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import inner membrane translocase subunit TIM50
            [Gossypium hirsutum].
ACCESSION   XP_016706358
VERSION     XP_016706358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM50"
                     /calculated_mol_wt=42331
     Region          186..333
                     /region_name="NIF"
                     /note="NLI interacting factor-like phosphatase; pfam03031"
                     /db_xref="CDD:397254"
     Site            order(191..195,199..200,231..234,238,270,286..287,
                     289..291)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..371
                     /gene="LOC107921018"
                     /coded_by="XM_016850869.2:384..1499"
                     /db_xref="GeneID:107921018"
ORIGIN      
        1 mssivlrsri gsndcsskii yrrvlssgvv ssssssssnp sketiipsqs ilsdnpappt
       61 ppppapeast qvsgrkswtf lkygllatvt gaigyagyls ykcsyeeveq kakslraaas
      121 ytpsedaaav ekyrgmlysa amtvpakale syldlrkmve ehvmeftept sdkllpdlhp
      181 qeqhvftlvl dlnetllytd wkrergwrtf krpgvdafle hmakfyeivv ysdqmnmyvd
      241 pvcerldpnh yiryrlsrga tkyqdgkhyr dlsklnrdpa kilyvsahaf esslqpencv
      301 pikpykletd dtalldlipf leyvarnspa dirqvlqsye rkdvakefle rskeyqrrmq
      361 gqrqqgrfww r
//
LOCUS       XP_016706619             364 aa            linear   PLN 06-AUG-2024
DEFINITION  meiotic recombination protein SPO11-1 [Gossypium hirsutum].
ACCESSION   XP_016706619
VERSION     XP_016706619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="meiotic recombination protein SPO11-1"
                     /calculated_mol_wt=41860
     Region          7..361
                     /region_name="Spo11"
                     /note="DNA topoisomerase VI, subunit A [Replication,
                     recombination and repair]; COG1697"
                     /db_xref="CDD:441303"
     CDS             1..364
                     /gene="LOC107921254"
                     /coded_by="XM_016851130.2:85..1179"
                     /db_xref="GeneID:107921254"
ORIGIN      
        1 megirsstrs rdllrkikef tlsiledlse glsplifiqs frtyctnldl icscrsnqps
       61 gheiltfqke shvhridvll rvllivqqll qenkhaskrd iyymhplifs dqsvvdrain
      121 dicillqcsr hnlnvvsvgn glvmgwlrff eagrkfdcin spntahtvpv lvedvkdlvs
      181 aalyilvvek esvfqrlend kfcsknrciv itgrgypdvp trrflrllvd klclpvyclv
      241 dcdpygfdil atyrfgsmqm aydakflrvp qiqwlgafps dsenydlpkq cllpltiedk
      301 rkteamlqrc ylhqevpdwr selelmlqrg tkfeiealsv hslsflsevy ipgkiqeiks
      361 icqv
//
LOCUS       XP_016707522             376 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707522
VERSION     XP_016707522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852033.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..376
                     /product="two-pore potassium channel 1 isoform X1"
                     /calculated_mol_wt=41895
     Region          97..178
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          229..294
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..376
                     /gene="LOC107922154"
                     /coded_by="XM_016852033.2:16..1146"
                     /db_xref="GeneID:107922154"
ORIGIN      
        1 mqqqttsawv fqelssvfen qipstykhfy idlqtyfplv vvfmldhfys iismtsndek
       61 apkkrsiqgc katlvaakca ppdalragfp dlkrlgtyfg iylgvgtvif yalkndirgh
      121 ktidfidsly lcvvtmttvg ygdlvphsyn aqlvciffit vgmclfgiav kiaakylvvk
      181 qqmvmvnalr msrkmgpvea lkeiesvkid ynklkislia maghyvigif vlltvegmdf
      241 tdaiycaftt mtttgfgdet fqepfgrmfa vfwistgtsc vgqlflyiae iytdietkkl
      301 akqvisnnii aktdleaadd ikdgkvygaa dmilyklkek gkikqddisv amkdlndvik
      361 dvdvddvtpp ksaqek
//
LOCUS       XP_040942978             333 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942978
VERSION     XP_040942978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087044.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..333
                     /product="two-pore potassium channel 1 isoform X2"
                     /calculated_mol_wt=36751
     Region          54..135
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          186..251
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..333
                     /gene="LOC107922154"
                     /coded_by="XM_041087044.1:58..1059"
                     /db_xref="GeneID:107922154"
ORIGIN      
        1 mldhfysiis mtsndekapk krsiqgckat lvaakcappd alragfpdlk rlgtyfgiyl
       61 gvgtvifyal kndirghkti dfidslylcv vtmttvgygd lvphsynaql vciffitvgm
      121 clfgiavkia akylvvkqqm vmvnalrmsr kmgpvealke iesvkidynk lkisliamag
      181 hyvigifvll tvegmdftda iycafttmtt tgfgdetfqe pfgrmfavfw istgtscvgq
      241 lflyiaeiyt dietkklakq visnniiakt dleaaddikd gkvygaadmi lyklkekgki
      301 kqddisvamk dlndvikdvd vddvtppksa qek
//
LOCUS       XP_016707524             333 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707524
VERSION     XP_016707524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852035.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..333
                     /product="two-pore potassium channel 1 isoform X2"
                     /calculated_mol_wt=36751
     Region          54..135
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          186..251
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..333
                     /gene="LOC107922154"
                     /coded_by="XM_016852035.2:81..1082"
                     /db_xref="GeneID:107922154"
ORIGIN      
        1 mldhfysiis mtsndekapk krsiqgckat lvaakcappd alragfpdlk rlgtyfgiyl
       61 gvgtvifyal kndirghkti dfidslylcv vtmttvgygd lvphsynaql vciffitvgm
      121 clfgiavkia akylvvkqqm vmvnalrmsr kmgpvealke iesvkidynk lkisliamag
      181 hyvigifvll tvegmdftda iycafttmtt tgfgdetfqe pfgrmfavfw istgtscvgq
      241 lflyiaeiyt dietkklakq visnniiakt dleaaddikd gkvygaadmi lyklkekgki
      301 kqddisvamk dlndvikdvd vddvtppksa qek
//
LOCUS       XP_016707525             355 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 [Gossypium hirsutum].
ACCESSION   XP_016707525
VERSION     XP_016707525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="two-pore potassium channel 1"
                     /calculated_mol_wt=39241
     Region          73..155
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          194..269
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          <289..347
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..355
                     /gene="LOC107922155"
                     /coded_by="XM_016852036.2:247..1314"
                     /db_xref="GeneID:107922155"
ORIGIN      
        1 macndenepl lsglatprtq ktngdrpkkr rfrrvrsapf adfvptdgnr eaalprsgsi
       61 fgrlnpslkk valfltlymg lgticfyttr tqikgdktng ildalyfcvv tmttvgygdl
      121 vpnsdlakll acafvftgma lvglvltkaa dylaekqeil lvkalhmnqk vgelqvlkei
      181 etnrvkykfy ttliilvvli ltgtiflyev enlglvdsfy cvcstittlg ygdksfsteg
      241 grifavfwil asticlaqcf lyvaevnten rqralvkwvl srrttnvdle aadidddgvv
      301 gaaefvlfkl kemgkicqqd isvimeefen ldvdqsgtls vsdiseaqsv etrmp
//
LOCUS       XP_016706770             355 aa            linear   PLN 06-AUG-2024
DEFINITION  two-pore potassium channel 1 [Gossypium hirsutum].
ACCESSION   XP_016706770
VERSION     XP_016706770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851281.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="two-pore potassium channel 1"
                     /calculated_mol_wt=39200
     Region          73..155
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          194..269
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          <289..342
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..355
                     /gene="LOC107921432"
                     /coded_by="XM_016851281.2:211..1278"
                     /db_xref="GeneID:107921432"
ORIGIN      
        1 masnqplvsg satpktqtsn vdrpkkrrvr rvrsaplahf aptdangddd allrsesifg
       61 rlnptlknva lsltvivymg lgticfytir nqikgkktna ildalyfcvv tmttvgygdl
      121 vpnsnlakll acafvftgma liglilakaa dylvekqekl lfralhmykk dgeievlkev
      181 ehnrvkykfy ttsillvvfv vtgtiflykv ekldlvdafy cvsstittlg ygdisfsskg
      241 grvfavfwil tgticvakff lyvaevnten rqralvkwvl srrttsldle aadldndgvv
      301 gaaefvlfkl kemgkicqqd isvimeefee ldldqsgtlt vsnialaqsv etrss
//
LOCUS       XP_016733878             114 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016733878
VERSION     XP_016733878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12793
     CDS             1..114
                     /gene="LOC107944579"
                     /coded_by="XM_016878389.2:1579..1923"
                     /db_xref="GeneID:107944579"
ORIGIN      
        1 mnvsedesql saiarailni lssenvkilt yfnqkmveqg vfresysnni fscsttrisl
       61 afayrdhspl qrrfplfste ycfssgltgh stwafqllll fstsevvccs lqls
//
LOCUS       XP_016733879             112 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016733879
VERSION     XP_016733879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12579
     CDS             1..112
                     /gene="LOC107944579"
                     /coded_by="XM_016878390.2:1579..1917"
                     /db_xref="GeneID:107944579"
ORIGIN      
        1 mnvsedesql saiarailni lssenvkilt yfnqkmskec lekvtqtisf laqpreshll
       61 lltdlspfqr qfplfsieyr fssgltghst wafqllllfs tsevvccslq ls
//
LOCUS       XP_016736848             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016736848
VERSION     XP_016736848.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016881359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016736848.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..271
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30297
     CDS             1..271
                     /gene="LOC107946866"
                     /coded_by="XM_016881359.2:280..1095"
                     /db_xref="GeneID:107946866"
ORIGIN      
        1 mkitrtqshk rrftafalsa sppcsisgsi lqftilcyll nmvatatenq rcspfdlfkp
       61 yllcvsilvp slvltsflgl gfyvilftat iliistsflv kfskksngvl venpsstklq
      121 vedevltpll mnktvsdaai eadngivnef qvddsldlts ereyvemkwm isdnvlernr
      181 eisdeystse eddeegliei aipsndttsl neepkpnlqs nlptllpepi fhqqdlvell
      241 eeinevneee nlieidismg sikfptfeiq a
//
LOCUS       XP_040942981             184 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-3 [Gossypium hirsutum].
ACCESSION   XP_040942981
VERSION     XP_040942981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087047.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="nuclear transcription factor Y subunit B-3"
                     /calculated_mol_wt=19629
     Region          29..118
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(30..31,34,60,63..64,68,71..72,75..76,79,99..101,103)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(31..36,39,43..44,47..49,52..55,58,61..62,65..70,
                     72..75,78,87..91,94,98,102..103,106,110,113,117..118)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(31,36..39,42,45,53..56,59,87..88)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..184
                     /gene="LOC121213841"
                     /coded_by="XM_041087047.1:361..915"
                     /db_xref="GeneID:121213841"
ORIGIN      
        1 madsdsesgg aqnnasnaag nnnhlfspke qdrflpianv grimkkalpa nakiskeake
       61 tvqecvsefi sfitgeasdk cqkekrktin gddllwamtt lgfedyvepl kvylqrfrem
      121 egekttvard kdaplvaasg gggggvygmm vhqhqghvyg stgfhqmgsg lgkggppnnl
      181 grpk
//
LOCUS       XP_016733552             208 aa            linear   PLN 06-AUG-2024
DEFINITION  classical arabinogalactan protein 5 [Gossypium hirsutum].
ACCESSION   XP_016733552
VERSION     XP_016733552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="classical arabinogalactan protein 5"
                     /calculated_mol_wt=19923
     Region          <89..>179
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..208
                     /gene="LOC107944242"
                     /coded_by="XM_016878063.2:141..767"
                     /db_xref="GeneID:107944242"
ORIGIN      
        1 mirlvnvsic vlfisvtgil vkadnapsps pkttpvspak apttsssppi tspskspsss
       61 ppsatpassp sitspppatt ptamptpsqs ptatppasss ppaqspatps paassppsmt
      121 pvgappvaeg pvgtpessan ipsssatpae spaifpstss ppmatpvgss pesaegpavn
      181 desgsksgye vgfvvltasl vigsalil
//
LOCUS       XP_040942983             298 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 10 [Gossypium hirsutum].
ACCESSION   XP_040942983
VERSION     XP_040942983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087049.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..298
                     /product="nudix hydrolase 10"
                     /calculated_mol_wt=33728
     Region          26..104
                     /region_name="Nudix_hydro"
                     /note="Nudix hydrolase domain; pfam18290"
                     /db_xref="CDD:465697"
     Region          117..238
                     /region_name="NUDIX_ASFGF2_Nudt6"
                     /note="Antisense Basic Fibroblast Growth Factor; cd04670"
                     /db_xref="CDD:467554"
     CDS             1..298
                     /gene="LOC121213843"
                     /coded_by="XM_041087049.1:227..1123"
                     /db_xref="GeneID:121213843"
ORIGIN      
        1 msvsmdlrev vgsqvcgngv whtellpatn dghggvivem kehmdsetfv ivlrasmlqw
       61 kqqgkkgvwi klpiglvhlv ettvkegfry hhaepsylml vswipntpnn ipanvthrvr
      121 vgaiilndkr evltvqeksg rfrgtgiwki ptgvvdeged ifmgairevr eetgvdtefv
      181 evlgfsqshk tffeksdlff lcmlrplsfd iqkqeleiea vqwmpfeeya aqpfaqkhel
      241 fkyinelcla kvdrdyagfs prptlsmfsd qpsylylnnk dldksssann scinvklg
//
LOCUS       XP_016708239            1820 aa            linear   PLN 06-AUG-2024
DEFINITION  titin homolog [Gossypium hirsutum].
ACCESSION   XP_016708239
VERSION     XP_016708239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852750.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1820
                     /product="titin homolog"
                     /calculated_mol_wt=200470
     Region          1617..>1692
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..1820
                     /gene="LOC107922632"
                     /coded_by="XM_016852750.2:203..5665"
                     /db_xref="GeneID:107922632"
ORIGIN      
        1 mstiekvlvq iferknriid hvkqqilffd hqlaskclid gfvpppwlls sftsklnked
       61 lisglllpqs qasipycsly qqpvvttdnv qlphilcsri dasnegldqc lpgkvdeldp
      121 svtsppqdcr dgmmsdvcpd hcsslariqr sksrqraleh rnsakarknn escekngnss
      181 nnqnkgseva slqsdvvdkl elirssdivv nhevekverg qcrskkrsen vylgrvtrsr
      241 ssihpsmses gpsgtgndsf vakqdnvvss evekgervec rskertekvy sgrvtrsrgs
      301 aqpsksingl sgagntssva kqdgvvltds isesrqqlgv fqelleskfv gpvhavslgv
      361 kteeegqlqs kargediysg rltrsrssvq hpksdysppg agksfsvakq dgtvltesin
      421 ksglqhdaad kllqfvkpvd vvtcivekee rgqcqgkerg ksihsvsikr vrhsaqppks
      481 lngfscagki sdvakcdgqh nvvdellesv kpsaisagsc gskeandpqs seknvcqgrl
      541 krsrshsqqq ncenkhlkld snpdsstddg icksmqvacl thdlkelikp cditdescgi
      601 kakasdnhtk lstvvdqynd gstrsranrs anmfkhvdsn alesavkqst skasnkppya
      661 kssgrskgie fkdlsgtqvn plpcandsgl aelnqcdtiv adteadsdel veahsassas
      721 nlngvndpll aktlnmhdrv dletvrtsph sesammvlpk qldfddlges tlneasslis
      781 ereevinsle krfltplpca dkldevtsdl yqekynssqe kllnqeaire kekesetdln
      841 ktsglgrtsn lnvvslvret peastdavrs ilpesneise qkplmedlst tfkvsnenlf
      901 gnslkdaags slnvdtgmey lfkdygklee ensvmstqka snlntdlcgc pailadtdft
      961 rvcspallrk asatssdase hpcaalleet tghslkqkme pslaqyqdad smgrciaddi
     1021 dsvldhkhak ssenkvatqs iqpgrhfgth megswsykrr kieghqsnsl slsssskgee
     1081 imllnadtfl adeedqnagk wnwkekggne sppsnfmhkk fdatsisslp qetlesiedh
     1141 svegtravdp sstmfsstrk ctadenkvll nvgyksefgn iehftcdgrs kqesksqlge
     1201 dgvsspcrqp tdltmseqsr pevegfiiqt dseqvfidge gisfhsldlp kttiecagll
     1261 eqlcksacvd tplsqfptty rwqrttdlyq svpngllecm nlnstllnnd alkgqlkvst
     1321 scfgedinha flggsfsdcl pfsssrvtgd grkpylspig klwdkitlns gssekrgsln
     1381 pdlpciseen enmdeavdtf eedaafevea csgkrealae ikecpnvpaa vseseqftvr
     1441 dsldsvntty sfsrtengik qkvgkhnask rrdtsklkqn rsllpgangt kraseslrnr
     1501 fskpqlsekt slrkggpsfs qkelkvnniv snvtsfipii qqkqaasvtt gkrdvkvkal
     1561 eaaeaakkla ekkekdrkmk kealklerar leqenlrqle lekkkkeeer kkkeadmaak
     1621 krqreeeerl akerkrkhmd etrrqqrape eklrskkden eekrqamder aqttkgpsde
     1681 aakykkvqke iaggnegkks emefstavas tsvkactaie dnntkvmstm drgrgnnsli
     1741 adtsqeqsyd ispykvsdde dedddepnnk fvpswasknr valvvasqqr ldpevifppg
     1801 sfcsisevll prklqqyrvs
//
LOCUS       XP_016708240            1820 aa            linear   PLN 06-AUG-2024
DEFINITION  titin homolog [Gossypium hirsutum].
ACCESSION   XP_016708240
VERSION     XP_016708240.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852751.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1820
                     /product="titin homolog"
                     /calculated_mol_wt=200470
     Region          1617..>1692
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..1820
                     /gene="LOC107922632"
                     /coded_by="XM_016852751.2:203..5665"
                     /db_xref="GeneID:107922632"
ORIGIN      
        1 mstiekvlvq iferknriid hvkqqilffd hqlaskclid gfvpppwlls sftsklnked
       61 lisglllpqs qasipycsly qqpvvttdnv qlphilcsri dasnegldqc lpgkvdeldp
      121 svtsppqdcr dgmmsdvcpd hcsslariqr sksrqraleh rnsakarknn escekngnss
      181 nnqnkgseva slqsdvvdkl elirssdivv nhevekverg qcrskkrsen vylgrvtrsr
      241 ssihpsmses gpsgtgndsf vakqdnvvss evekgervec rskertekvy sgrvtrsrgs
      301 aqpsksingl sgagntssva kqdgvvltds isesrqqlgv fqelleskfv gpvhavslgv
      361 kteeegqlqs kargediysg rltrsrssvq hpksdysppg agksfsvakq dgtvltesin
      421 ksglqhdaad kllqfvkpvd vvtcivekee rgqcqgkerg ksihsvsikr vrhsaqppks
      481 lngfscagki sdvakcdgqh nvvdellesv kpsaisagsc gskeandpqs seknvcqgrl
      541 krsrshsqqq ncenkhlkld snpdsstddg icksmqvacl thdlkelikp cditdescgi
      601 kakasdnhtk lstvvdqynd gstrsranrs anmfkhvdsn alesavkqst skasnkppya
      661 kssgrskgie fkdlsgtqvn plpcandsgl aelnqcdtiv adteadsdel veahsassas
      721 nlngvndpll aktlnmhdrv dletvrtsph sesammvlpk qldfddlges tlneasslis
      781 ereevinsle krfltplpca dkldevtsdl yqekynssqe kllnqeaire kekesetdln
      841 ktsglgrtsn lnvvslvret peastdavrs ilpesneise qkplmedlst tfkvsnenlf
      901 gnslkdaags slnvdtgmey lfkdygklee ensvmstqka snlntdlcgc pailadtdft
      961 rvcspallrk asatssdase hpcaalleet tghslkqkme pslaqyqdad smgrciaddi
     1021 dsvldhkhak ssenkvatqs iqpgrhfgth megswsykrr kieghqsnsl slsssskgee
     1081 imllnadtfl adeedqnagk wnwkekggne sppsnfmhkk fdatsisslp qetlesiedh
     1141 svegtravdp sstmfsstrk ctadenkvll nvgyksefgn iehftcdgrs kqesksqlge
     1201 dgvsspcrqp tdltmseqsr pevegfiiqt dseqvfidge gisfhsldlp kttiecagll
     1261 eqlcksacvd tplsqfptty rwqrttdlyq svpngllecm nlnstllnnd alkgqlkvst
     1321 scfgedinha flggsfsdcl pfsssrvtgd grkpylspig klwdkitlns gssekrgsln
     1381 pdlpciseen enmdeavdtf eedaafevea csgkrealae ikecpnvpaa vseseqftvr
     1441 dsldsvntty sfsrtengik qkvgkhnask rrdtsklkqn rsllpgangt kraseslrnr
     1501 fskpqlsekt slrkggpsfs qkelkvnniv snvtsfipii qqkqaasvtt gkrdvkvkal
     1561 eaaeaakkla ekkekdrkmk kealklerar leqenlrqle lekkkkeeer kkkeadmaak
     1621 krqreeeerl akerkrkhmd etrrqqrape eklrskkden eekrqamder aqttkgpsde
     1681 aakykkvqke iaggnegkks emefstavas tsvkactaie dnntkvmstm drgrgnnsli
     1741 adtsqeqsyd ispykvsdde dedddepnnk fvpswasknr valvvasqqr ldpevifppg
     1801 sfcsisevll prklqqyrvs
//
LOCUS       XP_016707955             718 aa            linear   PLN 06-AUG-2024
DEFINITION  poly(A)-specific ribonuclease PARN isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707955
VERSION     XP_016707955.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852466.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707955.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..718
                     /product="poly(A)-specific ribonuclease PARN isoform X1"
                     /calculated_mol_wt=81858
     Region          35..463
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     CDS             1..718
                     /gene="LOC107922431"
                     /coded_by="XM_016852466.2:100..2256"
                     /db_xref="GeneID:107922431"
ORIGIN      
        1 mnttrhwpkr afilsralsr afsdtpsptf plkhvtrsnf dsalvelrsh vraadfvaid
       61 memtgvtsap wresfefdrf dirylkvkds aekfavlqfg vcpfrwdslk qsfiahphnf
      121 fvfprqeipl drtsyeflcq ttsmdflaky qfdfnacihe gisylsrgqe dearkrlisp
      181 kgdqlthlsh nlretmdlpl vrvadvlfte rmkkrlgewr ddllqnrvgg pqeekvpddl
      241 nqqfrtvffk mrpalsldgf tshqlslirm vtrkhfkdlt yvcfngests eelvvytdse
      301 sdkarlmeev kndhqrsaem kinaavgfrh vidllssenk livghncild iahvhskfla
      361 plpstaeefv scvnkyfpsi idtkillnad ytlqrkmkrs stslssafsl lcpeiahgft
      421 rnvlsyepcv kvevhvdemr ssnwnsgakh eagydafmtg cvfaqacshl gidfqlhsps
      481 enltqneklq khmnllylsw ingdiidlrt gnrsaelsgs nmirkpyqki lfknivllwg
      541 fpsklkpsmi rdcicktlgp ssvistycid qtavfvqfsk aelasdflnl ketleqsnda
      601 ishlhplsql leggntraas yetykeicas piskvlfadq aeavgikwkt ellpsdkees
      661 hdntrshles amdspqavqk sktrntedvv ndssnkrfcd diidsflkve kirrttnl
//
LOCUS       XP_016707956             681 aa            linear   PLN 06-AUG-2024
DEFINITION  poly(A)-specific ribonuclease PARN isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707956
VERSION     XP_016707956.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852467.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707956.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..681
                     /product="poly(A)-specific ribonuclease PARN isoform X2"
                     /calculated_mol_wt=77576
     Region          35..426
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     CDS             1..681
                     /gene="LOC107922431"
                     /coded_by="XM_016852467.2:101..2146"
                     /db_xref="GeneID:107922431"
ORIGIN      
        1 mnttrhwpkr afilsralsr afsdtpsptf plkhvtrsnf dsalvelrsh vraadfvaid
       61 memtgvtsap wresfefdrf dirylkvkds aekfavlqfg vcpfrwdslk qsfiahphnf
      121 fvfprqeipl drtsyeflcq ttsmdflaky qfdfnacihe gisylsrgqe dearkrlisp
      181 kgdqlthlsh nlretmdlpl vrvadvlfte rmkkrlgewr ddllqnrvgg pqeekvpddl
      241 nqqfrtvffk mrpalsldgf tshqlslirm eevkndhqrs aemkinaavg frhvidllss
      301 enklivghnc ildiahvhsk flaplpstae efvscvnkyf psiidtkill nadytlqrkm
      361 krsstslssa fsllcpeiah gftrnvlsye pcvkvevhvd emrssnwnsg akheagydaf
      421 mtgcvfaqac shlgidfqlh spsenltqne klqkhmnlly lswingdiid lrtgnrsael
      481 sgsnmirkpy qkilfknivl lwgfpsklkp smirdcickt lgpssvisty cidqtavfvq
      541 fskaelasdf lnlketleqs ndaishlhpl sqlleggntr aasyetykei caspiskvlf
      601 adqaeavgik wktellpsdk eeshdntrsh lesamdspqa vqksktrnte dvvndssnkr
      661 fcddiidsfl kvekirrttn l
//
LOCUS       XP_016707958             658 aa            linear   PLN 06-AUG-2024
DEFINITION  probable L-type lectin-domain containing receptor kinase S.7
            [Gossypium hirsutum].
ACCESSION   XP_016707958
VERSION     XP_016707958.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707958.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..658
                     /product="probable L-type lectin-domain containing
                     receptor kinase S.7"
                     /calculated_mol_wt=72556
     Region          22..252
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            order(22..23,25,33,66,69,166,186,197,199..201,209..211,
                     213,225)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173887"
     Site            order(22..23,25,33,66,69,225)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173887"
     Site            125
                     /site_type="other"
                     /note="N-linked glycosylation site"
                     /db_xref="CDD:173887"
     Site            order(138,140,154)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     Region          354..622
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(354..358,362,375,377,405,421..424,428,430,474,476,
                     478..479,481,492,495,512..515)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(354..358,362,375,377,405,421..424,428,474,476,
                     478..479,481,492)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(358,428,430,474,476,478,495,512..515)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(491..498,509..511,512..515)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..658
                     /gene="LOC107922432"
                     /coded_by="XM_016852469.2:114..2090"
                     /db_xref="GeneID:107922432"
ORIGIN      
        1 mlplprillv slfllltsae ntsfyfpfft vrnltllgds hlknggligl treigvpsss
       61 sgsliyenpi rffdqesnit asfstsfsfs isnlnptsfg dgltfflssd nltlgspggy
      121 lglvnssqpt karflavefd skldtefndp ngnhvgldin eldsiitada llqnidlksg
      181 dlitawidyk ndlrvlnvfl systvkpptp llsleidlsh ylkddmfvgf sastegstev
      241 hliynwsfrt fgflpvrsrs hphnvsdssv saitgipvsn stkkhhkrfg lglgiagpaf
      301 ffvvlavfgy vsvkkwkgmk vekclkaeil tgprefsyke lyaatrgfhs sriigrgafg
      361 nvykavffss gaigavkrsk hshegktefl aelsiiaglr hknlvqlqgw caekgelllv
      421 ydfmpngsld kllhpepeng illtwshrqn iaiglasvla ylhqeceqqv ihrdiktsni
      481 mldgnfnprl gdfglarlmd hdkspvstlt agtmgylape ylqygkatek tdvfsygvvi
      541 levacgrrpi erelnsqkmv nlvdwvwgly glgkiieaad krlngafkeq dmrklllvgl
      601 scahpdsaer psirrvlqil nneadpipvp kmkpsltfsc sltvedlvsd deesktta
//
LOCUS       XP_016706327             526 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ribosomal RNA small subunit methyltransferase B isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706327
VERSION     XP_016706327.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850838.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..526
                     /product="probable ribosomal RNA small subunit
                     methyltransferase B isoform X1"
                     /calculated_mol_wt=58540
     Region          61..524
                     /region_name="PRK14902"
                     /note="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /db_xref="CDD:237857"
     CDS             1..526
                     /gene="LOC107920991"
                     /coded_by="XM_016850838.2:211..1791"
                     /db_xref="GeneID:107920991"
ORIGIN      
        1 mahllplrvf lssqtqetps kplklskrsn nhktsistak kgllspshkm hklnlevsph
       61 ravsavrlmr iefggafadl lnekgkgsgd nemgyvertl gfrtrdlddr dlrlvtdivg
      121 gtirwrryld hligslchde smfrsmepll lqilrigfye ivklnmppya vvdenvklak
      181 valrpgagnm vngilrklvl vkennslplp klegdsraqa ralatlyshp vwmvrrwtky
      241 lgqeeaiqlm mwnnsdpsfs lranaakgit rddlvmqlns lkvphevslh lddfvrvkig
      301 lqnviragll keglcsvqde saglavsvvd pqpgediidc caapggktly masrlrgkgk
      361 vhaidinkgr lrilketakl qkvdgvvdti hadlrtfaes spmksgkvll dapcsglgvl
      421 skrsdlrwnr rledmeqlkn lqdelldaas tlvssggvli ystcsidpee nkdrveaflv
      481 rhpefridpv nryvpsdfvt kqgfyfsdpv khsldgafaa rlvrtl
//
LOCUS       XP_016706328             506 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ribosomal RNA small subunit methyltransferase B isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016706328
VERSION     XP_016706328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850839.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..506
                     /product="probable ribosomal RNA small subunit
                     methyltransferase B isoform X2"
                     /calculated_mol_wt=56256
     Region          61..504
                     /region_name="PRK14902"
                     /note="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /db_xref="CDD:237857"
     CDS             1..506
                     /gene="LOC107920991"
                     /coded_by="XM_016850839.2:172..1692"
                     /db_xref="GeneID:107920991"
ORIGIN      
        1 mahllplrvf lssqtqetps kplklskrsn nhktsistak kgllspshkm hklnlevsph
       61 ravsavrlmr iefggafadl lnekgkgsgd nemgyvertl gfrtrdlddr dlrlvtdivg
      121 gtirwrryld hligslchde smfrsmepll lqilrigfye ivklnmppya vvdenvklak
      181 valrpgagnm vngilrklvl vkennslplp klegdsraqa ralatlyshp vwmvrrwtky
      241 lgqeeaiqlm mwnnsdpsfs lranaakgit rddlvmqlns lknviragll keglcsvqde
      301 saglavsvvd pqpgediidc caapggktly masrlrgkgk vhaidinkgr lrilketakl
      361 qkvdgvvdti hadlrtfaes spmksgkvll dapcsglgvl skrsdlrwnr rledmeqlkn
      421 lqdelldaas tlvssggvli ystcsidpee nkdrveaflv rhpefridpv nryvpsdfvt
      481 kqgfyfsdpv khsldgafaa rlvrtl
//
LOCUS       XP_016706329             497 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ribosomal RNA small subunit methyltransferase B isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016706329
VERSION     XP_016706329.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850840.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="probable ribosomal RNA small subunit
                     methyltransferase B isoform X3"
                     /calculated_mol_wt=55409
     Region          61..495
                     /region_name="PRK14902"
                     /note="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /db_xref="CDD:237857"
     CDS             1..497
                     /gene="LOC107920991"
                     /coded_by="XM_016850840.2:173..1666"
                     /db_xref="GeneID:107920991"
ORIGIN      
        1 mahllplrvf lssqtqetps kplklskrsn nhktsistak kgllspshkm hklnlevsph
       61 ravsavrlmr iefggafadl lnekgkgsgd nemgyvertl gfrtrdlddr dlrlvtdivg
      121 gtirwrryld hligslchde smfrsmepll lqilrigfye ivklnmppya vvdenvklak
      181 valrpgagnm vngilrklvl vkwmvrrwtk ylgqeeaiql mmwnnsdpsf slranaakgi
      241 trddlvmqln slkvphevsl hlddfvrvki glqnviragl lkeglcsvqd esaglavsvv
      301 dpqpgediid ccaapggktl ymasrlrgkg kvhaidinkg rlrilketak lqkvdgvvdt
      361 ihadlrtfae sspmksgkvl ldapcsglgv lskrsdlrwn rrledmeqlk nlqdelldaa
      421 stlvssggvl iystcsidpe enkdrveafl vrhpefridp vnryvpsdfv tkqgfyfsdp
      481 vkhsldgafa arlvrtl
//
LOCUS       XP_016707072            3763 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707072
VERSION     XP_016707072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851583.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..3763
                     /product="E3 ubiquitin-protein ligase UPL1 isoform X1"
                     /calculated_mol_wt=412239
     Region          85..359
                     /region_name="DUF908"
                     /note="Domain of Unknown Function (DUF908); pfam06012"
                     /db_xref="CDD:428721"
     Region          419..786
                     /region_name="DUF913"
                     /note="Domain of Unknown Function (DUF913); pfam06025"
                     /db_xref="CDD:461803"
     Region          1298..1334
                     /region_name="UBA_atUPL1_2_like"
                     /note="UBA domain found in Arabidopsis thaliana E3
                     ubiquitin-protein ligase UPL1 (atUPL1), UPL2 (atUPL2) and
                     similar proteins; cd14327"
                     /db_xref="CDD:270512"
     Region          2659..2686
                     /region_name="UBM"
                     /note="Ubiquitin binding region; pfam14377"
                     /db_xref="CDD:464159"
     Region          2696..>2719
                     /region_name="UBM"
                     /note="Ubiquitin binding region; pfam14377"
                     /db_xref="CDD:464159"
     Region          3401..3761
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(3407,3437,3448,3508,3688,3724..3725,3728..3732,3752,
                     3760)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(3536,3539..3540,3542..3543,3546,3552,3554,
                     3558..3559,3568,3573,3578,3595,3599)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..3763
                     /gene="LOC107921765"
                     /coded_by="XM_016851583.2:321..11612"
                     /db_xref="GeneID:107921765"
ORIGIN      
        1 mklkrrryle vppkirsfin svtsapleni eeplkdfvwe fdkgdfhhwv elfnhfdtff
       61 ekhikprkdl qvedkffgsd ppfpreavlq ilrvirlvld nctnkhfyss yeqhlsslla
      121 stdadvveac lqtlaaflkk tigkysvrda slssklfala qgwggkeegl gliacaiqng
      181 cdtvaydlgc tlhfefyasn evssseqstr glqiihlpni nthpetdlel lnklvgeykv
      241 panlrfslls rlrfarafgs ltsrqqytri rlyafivlvq assdtddlvs ffnnepefvn
      301 elvtllsyed avsekirilc llslvalcqd rsrqpavlta vtsgghrgil sslmqkaids
      361 visntskwsv vfaeallslv talvssssgc samreagfip tllpllkdtd pqhlhlvtta
      421 inileafmdy snpaaalfrd lgglddtisr lklevsyven spkqlvedpd csgrisqvva
      481 gasteldnmq plysealvay hrrllmkall raislgtyap gntariygse esllpqclci
      541 ifrrakdfgg gvfalaatvm sdlihkdptc fpvldaaglp safldaimdg vlcsaeaitc
      601 ipqclgafcl nnnglaavkd rnalrcfvki ftsrtyvrsl tgdtptslss gldelmrhas
      661 slrapgvdmv ieilnvilri gtgadtssfa aessapvpme tdaeernliq pddressrse
      721 ssdqmsevsp dtslmnielf lpdcisnvgr lletilqnad tcrifvekkg idavlrlftl
      781 pllplsasvg qsisvafksf spqhsaslar avcsflreql kltnellasi ggtqlatvet
      841 gnqtkvlrsl sslegilslc nfllkgttsv vselstvdad vlkdlgrayr eiiwqislsn
      901 dtmadekrka dqesegtdtg psnaavgres dddvstpavr ymnpvsirsg sqflgsadre
      961 flslvrsges lhrrsrhgls rlrggrngrh lnslnidsds shslpetssv qdlktkspgl
     1021 lvieilnkla ftlrsfftal vkgfttpyrr radvgslssa sktlgmalak iflealgfsg
     1081 yssssgldts lsvkcrylgk vvddmgaltf dsrrrtcytg mvnnfyvhgt fkellttfea
     1141 tsqllwtlpy svptpaiehe kagdankvsh gtwlldtlqc ycrvleyfvn stsllfgnst
     1201 sqtqllvqpv aaglsiglfp vprdpetfvr mlqsqvldvi lliwnhplfp ncspgfvasv
     1261 vsivmhiysg vgdvkrnrsn itgstnqrfm apapdegtia tivemgfsra raeealrrve
     1321 tnsvemamew lishaddpvq eddelarala lslgnssets kvdsvdkpmd vmteegrpta
     1381 ppiddilnas vklfqssdnm afsltdllvt lcnrnkgedr pkvlsfliqq lrlcpldfsk
     1441 dssalcmish ivalllsedg ntreiagqng vvpavldili dfkakndagn eimapkcisa
     1501 lllildnmlq srprlfsetv egtqtvsqpd ssgdhasltv pepvtekksa sdanekepit
     1561 sfekilgkst gyltvdesqk llllacelik qhvpamvmqa vlqlcarltk thalalqfle
     1621 ngglaalfsl prtcffpgyd tvasaiirhl ledpqtlqta meleirqtls gsrhagrvsp
     1681 rtfltsmapv icrdpvvfmk aatavcqles sggrpfvvll kekerekdkl kasgaevgla
     1741 snepvripen rvndgtgkcs kghkkipanl aqvidqllei vlkypsakgq edsatglism
     1801 eideptskvk gkskveetrk mesenersag lakvtfvlkl lsdillmyvh avgvilrrds
     1861 emgqlrvsnq sdtsgspgiv hhilhrllpl svdkssglde wrdklsekas wflvvlcgrs
     1921 segrkrvine lvkalsslsn vesnsmnssl vpdkrvfafa dlaysilskn ssssnlpgtg
     1981 cspdmaksmi eggvvqcltn ilevvdldhs dapktvslml kalesltraa naneqvfkfe
     2041 cfnkkkslss nerhtdqvti saaeetehnq ngggqqavvd aetteqqhqv tlqiednhna
     2101 nsndpieqdm rvevepvasn rpvelgmdfm reemeggvlh nvdqiemtfr venradddma
     2161 dedddmaddg eddedddege dedediaedg agmmsladtd vedhddtglg ddynddmide
     2221 edddfherrv ievrwreald gldhlqvlgq pgapsglidv aaepfegvnv ddlfglrrpv
     2281 gferrrsngr ssfdrsvtev ngfqhplllr psqagdlslm wssggnssrd leafssgsfd
     2341 vthfymfdap glpfdhapns lfgdrlgsaa pppltdysvg mdslhlqgrr gpgdgrwtdd
     2401 gqpqasaqaa aiaqaveeqf vshlrstapa nnlaerqsqn sgvqesqpsd appsndgkav
     2461 vegentssqq sedqlqennn gisqelnptg esvtcqgqln pqcgdmaesi qrhegiltqt
     2521 fslnnapdeh dnmeigdgnc ttaadqveqi semvnlpegg svvpenlspq smgddglsgg
     2581 dgqagnrilt gtglempnpg dsngssvhel idvdmntana eenqtdqsip heigaeepdt
     2641 ldsqdanqad qasaniegpg snaidptfle alpedlraev lasqqaqsvq pptyvppsad
     2701 nidpeflaal ppdiqaevla qqraqrvaqq aegqpvdmdn asiiatfpad lreevlltss
     2761 eavlsalpsp llaeaqmlrd ramshyqars lfggshrlsn rrnglgldrq tvmdrgvgit
     2821 lgrrpgstis dslkvkeieg epllnsnslk alirllrlaq plgkgllqrl llnlcahsat
     2881 ratlvkllld mirsevegss sglstinsqr lygchskvvy grsqvfdglp plvlrrvlei
     2941 ltylatnhsa vsnmlfhydp silseplspq npetkkdkgk ekiidgdask plgnsqgdip
     3001 lilflkllnr plfllstthl eqvvgllqvv vytaaskles wslshlavdn sssqnlldee
     3061 asgdahkdlp lteqesnqek rtktessgsk gnknvdfhni flqlpesdlc nlcsllgreg
     3121 lsdkvymlag evlkklasva vthrkfftse lselahglss savnelvtlr ntqmlglsag
     3181 smagaailrv lqvlssltst nvgndtpegg ddeqeeqatm wklnvslepl weelsncigl
     3241 teaqlaqssl cptvsninvg ehlqgassss plppgtrrll pfieaffvlc eklhanhsim
     3301 qqdhvnvtaq evkesaecsv slpskcggds qkkldgsvtf arfaekhrrl lnafvrqnpg
     3361 llekplsmll kaprlidfdn krayfrsrir qqheqhlagp lrisvrrayv ledsynqlrm
     3421 rptqdlkgrl nvqfqgeegi daggltrewy qllsrvifdk gallfttvgs natfqpnsns
     3481 vyqtehlsyf kfvgrvvaka lfdgqlldvy ftrsfykhil gvkvtyhdie avdpdyyknl
     3541 kwmlendvsd ipdltfsmda deekhilyek tevtdyelkp ggrntrvtee tkheyvdlva
     3601 dhiltnairp qinsflegfn elvprelisi fndkelelli sglpeidldd lkanteytgy
     3661 taaspviqwf wevvkafske dmarllqfvt gtskvplegf kalqgisgpq kfqihkafga
     3721 perlpsahtc fnqldlpeys skeqlqerll laiheasegf gfg
//
LOCUS       XP_016707074            3762 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707074
VERSION     XP_016707074.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851585.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3762
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..3762
                     /product="E3 ubiquitin-protein ligase UPL1 isoform X2"
                     /calculated_mol_wt=412111
     Region          85..358
                     /region_name="DUF908"
                     /note="Domain of Unknown Function (DUF908); pfam06012"
                     /db_xref="CDD:428721"
     Region          418..785
                     /region_name="DUF913"
                     /note="Domain of Unknown Function (DUF913); pfam06025"
                     /db_xref="CDD:461803"
     Region          1297..1333
                     /region_name="UBA_atUPL1_2_like"
                     /note="UBA domain found in Arabidopsis thaliana E3
                     ubiquitin-protein ligase UPL1 (atUPL1), UPL2 (atUPL2) and
                     similar proteins; cd14327"
                     /db_xref="CDD:270512"
     Region          2658..2685
                     /region_name="UBM"
                     /note="Ubiquitin binding region; pfam14377"
                     /db_xref="CDD:464159"
     Region          2695..>2718
                     /region_name="UBM"
                     /note="Ubiquitin binding region; pfam14377"
                     /db_xref="CDD:464159"
     Region          3400..3760
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(3406,3436,3447,3507,3687,3723..3724,3727..3731,3751,
                     3759)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(3535,3538..3539,3541..3542,3545,3551,3553,
                     3557..3558,3567,3572,3577,3594,3598)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..3762
                     /gene="LOC107921765"
                     /coded_by="XM_016851585.2:321..11609"
                     /db_xref="GeneID:107921765"
ORIGIN      
        1 mklkrrryle vppkirsfin svtsapleni eeplkdfvwe fdkgdfhhwv elfnhfdtff
       61 ekhikprkdl qvedkffgsd ppfpreavlq ilrvirlvld nctnkhfyss yehlssllas
      121 tdadvveacl qtlaaflkkt igkysvrdas lssklfalaq gwggkeeglg liacaiqngc
      181 dtvaydlgct lhfefyasne vssseqstrg lqiihlpnin thpetdlell nklvgeykvp
      241 anlrfsllsr lrfarafgsl tsrqqytrir lyafivlvqa ssdtddlvsf fnnepefvne
      301 lvtllsyeda vsekirilcl lslvalcqdr srqpavltav tsgghrgils slmqkaidsv
      361 isntskwsvv faeallslvt alvssssgcs amreagfipt llpllkdtdp qhlhlvttai
      421 nileafmdys npaaalfrdl gglddtisrl klevsyvens pkqlvedpdc sgrisqvvag
      481 asteldnmqp lysealvayh rrllmkallr aislgtyapg ntariygsee sllpqclcii
      541 frrakdfggg vfalaatvms dlihkdptcf pvldaaglps afldaimdgv lcsaeaitci
      601 pqclgafcln nnglaavkdr nalrcfvkif tsrtyvrslt gdtptslssg ldelmrhass
      661 lrapgvdmvi eilnvilrig tgadtssfaa essapvpmet daeernliqp ddressrses
      721 sdqmsevspd tslmnielfl pdcisnvgrl letilqnadt crifvekkgi davlrlftlp
      781 llplsasvgq sisvafksfs pqhsaslara vcsflreqlk ltnellasig gtqlatvetg
      841 nqtkvlrsls slegilslcn fllkgttsvv selstvdadv lkdlgrayre iiwqislsnd
      901 tmadekrkad qesegtdtgp snaavgresd ddvstpavry mnpvsirsgs qflgsadref
      961 lslvrsgesl hrrsrhglsr lrggrngrhl nslnidsdss hslpetssvq dlktkspgll
     1021 vieilnklaf tlrsfftalv kgfttpyrrr advgslssas ktlgmalaki flealgfsgy
     1081 ssssgldtsl svkcrylgkv vddmgaltfd srrrtcytgm vnnfyvhgtf kellttfeat
     1141 sqllwtlpys vptpaiehek agdankvshg twlldtlqcy crvleyfvns tsllfgnsts
     1201 qtqllvqpva aglsiglfpv prdpetfvrm lqsqvldvil liwnhplfpn cspgfvasvv
     1261 sivmhiysgv gdvkrnrsni tgstnqrfma papdegtiat ivemgfsrar aeealrrvet
     1321 nsvemamewl ishaddpvqe ddelaralal slgnssetsk vdsvdkpmdv mteegrptap
     1381 piddilnasv klfqssdnma fsltdllvtl cnrnkgedrp kvlsfliqql rlcpldfskd
     1441 ssalcmishi valllsedgn treiagqngv vpavldilid fkakndagne imapkcisal
     1501 llildnmlqs rprlfsetve gtqtvsqpds sgdhasltvp epvtekksas danekepits
     1561 fekilgkstg yltvdesqkl lllacelikq hvpamvmqav lqlcarltkt halalqflen
     1621 gglaalfslp rtcffpgydt vasaiirhll edpqtlqtam eleirqtlsg srhagrvspr
     1681 tfltsmapvi crdpvvfmka atavcqless ggrpfvvllk ekerekdklk asgaevglas
     1741 nepvripenr vndgtgkcsk ghkkipanla qvidqlleiv lkypsakgqe dsatglisme
     1801 ideptskvkg kskveetrkm esenersagl akvtfvlkll sdillmyvha vgvilrrdse
     1861 mgqlrvsnqs dtsgspgivh hilhrllpls vdkssgldew rdklsekasw flvvlcgrss
     1921 egrkrvinel vkalsslsnv esnsmnsslv pdkrvfafad laysilskns sssnlpgtgc
     1981 spdmaksmie ggvvqcltni levvdldhsd apktvslmlk alesltraan aneqvfkfec
     2041 fnkkkslssn erhtdqvtis aaeetehnqn gggqqavvda etteqqhqvt lqiednhnan
     2101 sndpieqdmr vevepvasnr pvelgmdfmr eemeggvlhn vdqiemtfrv enradddmad
     2161 edddmaddge ddedddeged edediaedga gmmsladtdv edhddtglgd dynddmidee
     2221 dddfherrvi evrwrealdg ldhlqvlgqp gapsglidva aepfegvnvd dlfglrrpvg
     2281 ferrrsngrs sfdrsvtevn gfqhplllrp sqagdlslmw ssggnssrdl eafssgsfdv
     2341 thfymfdapg lpfdhapnsl fgdrlgsaap ppltdysvgm dslhlqgrrg pgdgrwtddg
     2401 qpqasaqaaa iaqaveeqfv shlrstapan nlaerqsqns gvqesqpsda ppsndgkavv
     2461 egentssqqs edqlqennng isqelnptge svtcqgqlnp qcgdmaesiq rhegiltqtf
     2521 slnnapdehd nmeigdgnct taadqveqis emvnlpeggs vvpenlspqs mgddglsggd
     2581 gqagnriltg tglempnpgd sngssvheli dvdmntanae enqtdqsiph eigaeepdtl
     2641 dsqdanqadq asaniegpgs naidptflea lpedlraevl asqqaqsvqp ptyvppsadn
     2701 idpeflaalp pdiqaevlaq qraqrvaqqa egqpvdmdna siiatfpadl reevlltsse
     2761 avlsalpspl laeaqmlrdr amshyqarsl fggshrlsnr rnglgldrqt vmdrgvgitl
     2821 grrpgstisd slkvkeiege pllnsnslka lirllrlaqp lgkgllqrll lnlcahsatr
     2881 atlvkllldm irsevegsss glstinsqrl ygchskvvyg rsqvfdglpp lvlrrvleil
     2941 tylatnhsav snmlfhydps ilseplspqn petkkdkgke kiidgdaskp lgnsqgdipl
     3001 ilflkllnrp lfllstthle qvvgllqvvv ytaasklesw slshlavdns ssqnlldeea
     3061 sgdahkdlpl teqesnqekr tktessgskg nknvdfhnif lqlpesdlcn lcsllgregl
     3121 sdkvymlage vlkklasvav thrkfftsel selahglsss avnelvtlrn tqmlglsags
     3181 magaailrvl qvlssltstn vgndtpeggd deqeeqatmw klnvsleplw eelsnciglt
     3241 eaqlaqsslc ptvsninvge hlqgassssp lppgtrrllp fieaffvlce klhanhsimq
     3301 qdhvnvtaqe vkesaecsvs lpskcggdsq kkldgsvtfa rfaekhrrll nafvrqnpgl
     3361 lekplsmllk aprlidfdnk rayfrsrirq qheqhlagpl risvrrayvl edsynqlrmr
     3421 ptqdlkgrln vqfqgeegid aggltrewyq llsrvifdkg allfttvgsn atfqpnsnsv
     3481 yqtehlsyfk fvgrvvakal fdgqlldvyf trsfykhilg vkvtyhdiea vdpdyyknlk
     3541 wmlendvsdi pdltfsmdad eekhilyekt evtdyelkpg grntrvteet kheyvdlvad
     3601 hiltnairpq insflegfne lvprelisif ndkelellis glpeidlddl kanteytgyt
     3661 aaspviqwfw evvkafsked marllqfvtg tskvplegfk alqgisgpqk fqihkafgap
     3721 erlpsahtcf nqldlpeyss keqlqerlll aiheasegfg fg
//
LOCUS       XP_016707358            1139 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g55840 [Gossypium
            hirsutum].
ACCESSION   XP_016707358
VERSION     XP_016707358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1139
                     /product="pentatricopeptide repeat-containing protein
                     At5g55840"
                     /calculated_mol_wt=127976
     Region          164..191
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          168..209
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          195..243
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          199..226
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <230..732
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          234..261
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          267..296
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          302..331
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          337..363
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          372..400
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          407..436
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          442..471
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          477..503
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          512..538
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          549..576
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          582..611
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          617..643
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          654..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          687..716
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          723..752
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <733..>1105
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          795..822
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          828..857
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          863..889
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          898..959
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          972..997
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          1003..1032
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          1038..1067
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          1073..1103
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1139
                     /gene="LOC107922042"
                     /coded_by="XM_016851869.2:87..3506"
                     /db_xref="GeneID:107922042"
ORIGIN      
        1 msstlsssat ktllaslhle yakfrpfsil gsfqfsttts kpddqnatvk nhsqfselen
       61 siytiltidr weslnhmnyk laslrqvhgr lalrflnffi nqpglehnhl thvlsitthi
      121 lvrarmydsa ksllrqlckl gvgsrfvfga lmdtyslcns npsvfdllir vylkdgmidn
      181 aletfnlmrf rgfkpsvytc nmmlgsmvkd grvcsvweff kelldlkicp niatfnilin
      241 vlcvegklek avyllrkmen sgyvptivty ntllhwfckn gryksafeli drmgskgiea
      301 dvctynmlid dlcrndrsak aylllkkmrk rrispnaity ntlingfvkv gslgvatrif
      361 demayfnlsp nvatynalie ghsnegnfee alrlmdmmek vglrlnevsy gvllnglckh
      421 gkfdlvrrff ermrtngmgf gcipytemid glckkglfde avqmfhemfe egvapdiitf
      481 svlingfyqa gnikcvkeii ckmyragfrp nkviystliy nsckmglvte alkiyrimnc
      541 sghvadhftc ntlvaslcrd gkvreaeefm rhmsrigpnp nsitfdcvis gygnlgdglk
      601 afslfdemvk lgntpsffty ssllkglckg gnlveakkfl nklhyipsav dnvvyntila
      661 gtcksgnmwd svalfeemvl fgvlpdsyty tillnglcrk gkvaaallfl gklmdkgvft
      721 pnqvtytclv dglfkagqsk aayyfykeme qksryldvia fnaaldgtsr rgklmkvnnl
      781 fsmmrskslc pslptynill hgyakqkeir tcsslfklmi ssgllpdrlt fhslilglck
      841 tgmldvgiki lkkmisegve vdrftfnmli skccergdtg ktfdlvnamn flgifpdaet
      901 lnalviglnr nlalqeshiv lhemahkgyl pkgkqyitli namcrarnlq aalelkdemt
      961 slgitspdva esaivrglal sgkveeailf ldrmirkqlv ptvatfttlm hmlckesnia
     1021 ealklrnkmq lcglkldvva ynviisglca ngdiaaafel yqemkqnglw pnattytvlv
     1081 dalliegsnp stgdvlledl kgrgiiscdw dgsteqfqka liiakkrfky lkqnkrkwh
//
LOCUS       XP_016707359            1139 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g55840 [Gossypium
            hirsutum].
ACCESSION   XP_016707359
VERSION     XP_016707359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1139
                     /product="pentatricopeptide repeat-containing protein
                     At5g55840"
                     /calculated_mol_wt=127976
     Region          164..191
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          168..209
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          195..243
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          199..226
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <230..732
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          234..261
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          267..296
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          302..331
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          337..363
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          372..400
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          407..436
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          442..471
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          477..503
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          512..538
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          549..576
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          582..611
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          617..643
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          654..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          687..716
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          723..752
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <733..>1105
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          795..822
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          828..857
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          863..889
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          898..959
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          972..997
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          1003..1032
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          1038..1067
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          1073..1103
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1139
                     /gene="LOC107922042"
                     /coded_by="XM_016851870.2:119..3538"
                     /db_xref="GeneID:107922042"
ORIGIN      
        1 msstlsssat ktllaslhle yakfrpfsil gsfqfsttts kpddqnatvk nhsqfselen
       61 siytiltidr weslnhmnyk laslrqvhgr lalrflnffi nqpglehnhl thvlsitthi
      121 lvrarmydsa ksllrqlckl gvgsrfvfga lmdtyslcns npsvfdllir vylkdgmidn
      181 aletfnlmrf rgfkpsvytc nmmlgsmvkd grvcsvweff kelldlkicp niatfnilin
      241 vlcvegklek avyllrkmen sgyvptivty ntllhwfckn gryksafeli drmgskgiea
      301 dvctynmlid dlcrndrsak aylllkkmrk rrispnaity ntlingfvkv gslgvatrif
      361 demayfnlsp nvatynalie ghsnegnfee alrlmdmmek vglrlnevsy gvllnglckh
      421 gkfdlvrrff ermrtngmgf gcipytemid glckkglfde avqmfhemfe egvapdiitf
      481 svlingfyqa gnikcvkeii ckmyragfrp nkviystliy nsckmglvte alkiyrimnc
      541 sghvadhftc ntlvaslcrd gkvreaeefm rhmsrigpnp nsitfdcvis gygnlgdglk
      601 afslfdemvk lgntpsffty ssllkglckg gnlveakkfl nklhyipsav dnvvyntila
      661 gtcksgnmwd svalfeemvl fgvlpdsyty tillnglcrk gkvaaallfl gklmdkgvft
      721 pnqvtytclv dglfkagqsk aayyfykeme qksryldvia fnaaldgtsr rgklmkvnnl
      781 fsmmrskslc pslptynill hgyakqkeir tcsslfklmi ssgllpdrlt fhslilglck
      841 tgmldvgiki lkkmisegve vdrftfnmli skccergdtg ktfdlvnamn flgifpdaet
      901 lnalviglnr nlalqeshiv lhemahkgyl pkgkqyitli namcrarnlq aalelkdemt
      961 slgitspdva esaivrglal sgkveeailf ldrmirkqlv ptvatfttlm hmlckesnia
     1021 ealklrnkmq lcglkldvva ynviisglca ngdiaaafel yqemkqnglw pnattytvlv
     1081 dalliegsnp stgdvlledl kgrgiiscdw dgsteqfqka liiakkrfky lkqnkrkwh
//
LOCUS       XP_016707361             212 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24beta2 [Gossypium
            hirsutum].
ACCESSION   XP_016707361
VERSION     XP_016707361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851872.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..212
                     /product="transmembrane emp24 domain-containing protein
                     p24beta2"
                     /calculated_mol_wt=24475
     Region          25..204
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..212
                     /gene="LOC107922043"
                     /coded_by="XM_016851872.2:148..786"
                     /db_xref="GeneID:107922043"
ORIGIN      
        1 mkigflvfva vallaflcsp navygirfvi dreecfshdv kyegdtihvs fvvikadstw
       61 hnshegvdlv vkgptgdqiq dfrdkisekf efvahqkgih hfcfsnkspy yetvdfdvhe
      121 shftyydqha kdehfnplle qiskleealy niqfeqhwle aqterqaivn eamskravhk
      181 afyesaalig asvlqvyllr rlferklgms rv
//
LOCUS       XP_040942984              78 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NOI4 [Gossypium hirsutum].
ACCESSION   XP_040942984
VERSION     XP_040942984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087050.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..78
                     /product="protein NOI4"
                     /calculated_mol_wt=8302
     Region          4..39
                     /region_name="AvrRpt-cleavage"
                     /note="Cleavage site for pathogenic type III effector
                     avirulence factor Avr; pfam05627"
                     /db_xref="CDD:398967"
     CDS             1..78
                     /gene="LOC121213844"
                     /coded_by="XM_041087050.1:341..577"
                     /db_xref="GeneID:121213844"
ORIGIN      
        1 mseekgrplp kfgewdvndp asaegftvif nkardekktg gkpespaksd snvkpgadpg
       61 ktqpkkwfcc vqappaes
//
LOCUS       XP_040942986             344 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942986
VERSION     XP_040942986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087052.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..344
                     /product="L10-interacting MYB domain-containing
                     protein-like isoform X1"
                     /calculated_mol_wt=38841
     Region          20..113
                     /region_name="Myb_DNA-bind_3"
                     /note="Myb/SANT-like DNA-binding domain; pfam12776"
                     /db_xref="CDD:432776"
     CDS             1..344
                     /gene="LOC121213846"
                     /coded_by="XM_041087052.1:176..1210"
                     /db_xref="GeneID:121213846"
ORIGIN      
        1 mvktrnfveg dsslatkavw ddeltlifce lcvnevnagn rptthlnskg wenvialfqa
       61 ktqknygkpq lknkwdtlkk ewrlwrellk estgigwcpl kktvnateew waekiqenpd
      121 fkgfkkkgie prlnelmwqm fggivatgen awapssgalp rgvpmgddap negfgdsdeh
      181 snenegippd evpsnpshgi pnrrketlgv vhgkgkksss srkssrntlt tqieklcesm
      241 asprksvnei ifphsqytis naidalralg deipkrdely yfatkmfqip vkremflnld
      301 pddrvwwlrr eyaeqnpias fsslvatspf pfqpyhqppp psap
//
LOCUS       XP_040942987             344 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942987
VERSION     XP_040942987.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087053.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..344
                     /product="L10-interacting MYB domain-containing
                     protein-like isoform X1"
                     /calculated_mol_wt=38841
     Region          20..113
                     /region_name="Myb_DNA-bind_3"
                     /note="Myb/SANT-like DNA-binding domain; pfam12776"
                     /db_xref="CDD:432776"
     CDS             1..344
                     /gene="LOC121213846"
                     /coded_by="XM_041087053.1:186..1220"
                     /db_xref="GeneID:121213846"
ORIGIN      
        1 mvktrnfveg dsslatkavw ddeltlifce lcvnevnagn rptthlnskg wenvialfqa
       61 ktqknygkpq lknkwdtlkk ewrlwrellk estgigwcpl kktvnateew waekiqenpd
      121 fkgfkkkgie prlnelmwqm fggivatgen awapssgalp rgvpmgddap negfgdsdeh
      181 snenegippd evpsnpshgi pnrrketlgv vhgkgkksss srkssrntlt tqieklcesm
      241 asprksvnei ifphsqytis naidalralg deipkrdely yfatkmfqip vkremflnld
      301 pddrvwwlrr eyaeqnpias fsslvatspf pfqpyhqppp psap
//
LOCUS       XP_040942988             344 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040942988
VERSION     XP_040942988.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087054.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..344
                     /product="L10-interacting MYB domain-containing
                     protein-like isoform X1"
                     /calculated_mol_wt=38841
     Region          20..113
                     /region_name="Myb_DNA-bind_3"
                     /note="Myb/SANT-like DNA-binding domain; pfam12776"
                     /db_xref="CDD:432776"
     CDS             1..344
                     /gene="LOC121213846"
                     /coded_by="XM_041087054.1:222..1256"
                     /db_xref="GeneID:121213846"
ORIGIN      
        1 mvktrnfveg dsslatkavw ddeltlifce lcvnevnagn rptthlnskg wenvialfqa
       61 ktqknygkpq lknkwdtlkk ewrlwrellk estgigwcpl kktvnateew waekiqenpd
      121 fkgfkkkgie prlnelmwqm fggivatgen awapssgalp rgvpmgddap negfgdsdeh
      181 snenegippd evpsnpshgi pnrrketlgv vhgkgkksss srkssrntlt tqieklcesm
      241 asprksvnei ifphsqytis naidalralg deipkrdely yfatkmfqip vkremflnld
      301 pddrvwwlrr eyaeqnpias fsslvatspf pfqpyhqppp psap
//
LOCUS       XP_040942989             333 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942989
VERSION     XP_040942989.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087055.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..333
                     /product="L10-interacting MYB domain-containing
                     protein-like isoform X2"
                     /calculated_mol_wt=37627
     Region          20..113
                     /region_name="Myb_DNA-bind_3"
                     /note="Myb/SANT-like DNA-binding domain; pfam12776"
                     /db_xref="CDD:432776"
     CDS             1..333
                     /gene="LOC121213846"
                     /coded_by="XM_041087055.1:176..1177"
                     /db_xref="GeneID:121213846"
ORIGIN      
        1 mvktrnfveg dsslatkavw ddeltlifce lcvnevnagn rptthlnskg wenvialfqa
       61 ktqknygkpq lknkwdtlkk ewrlwrellk estgigwcpl kktvnateew waekiqenpd
      121 fkgfkkkgie prlnelmwqm fggivatgen awapssgalp rgvpmgddap negfgippde
      181 vpsnpshgip nrrketlgvv hgkgkkssss rkssrntltt qieklcesma sprksvneii
      241 fphsqytisn aidalralgd eipkrdelyy fatkmfqipv kremflnldp ddrvwwlrre
      301 yaeqnpiasf sslvatspfp fqpyhqpppp sap
//
LOCUS       XP_040942990             664 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At5g55860 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942990
VERSION     XP_040942990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087056.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="WEB family protein At5g55860 isoform X1"
                     /calculated_mol_wt=73556
     Region          31..583
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..664
                     /gene="LOC107921984"
                     /coded_by="XM_041087056.1:784..2778"
                     /db_xref="GeneID:107921984"
ORIGIN      
        1 myntrvitnk qnimvakgrq natdsqkvev geidtsapfq svkdavtlfg egafsgekpa
       61 mkkakahsae rvlaketqlh ltqkelnklk eqlsnaeitk aqalvelera kktaeelshk
      121 lktvneskdc aakatdaakn kakqieeans gilpgpdgtr sqdsetareq ymivitelda
      181 akqelrkvrq dcdasleaki aafnqteeae haakvnmekv gelsreisyv qesigqvkla
      241 sletqqeqak mfaekdtqkq lykatleest kkllalknef dpklmrnlea qlletdnqig
      301 slqkqmesak asdlesvrti tseldgakes lqkvaeeens lrslveslkv elenvnkehs
      361 elkekeaete siagnlhvkl rkskseleaf lseesktrga caemlstlqq lsvetenapr
      421 kaeemkkeae klkleaeasr ialqeadkrl vvaleeaeaa keaetraldq ikmlsektna
      481 arastsesga nitisreefe slsrkveesd niaemkvaaa maqveavkas enealkrlea
      541 tqkeiedmkv atadalkrae maeaakrtve gelrkwreke qkkavaaasr ilieaqmste
      601 sspqhyriqk qnpaekivqa kmlekekssv skkvllpnis gifnrrknqi eggspsylpg
      661 ektl
//
LOCUS       XP_016707273             664 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At5g55860 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707273
VERSION     XP_016707273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851784.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="WEB family protein At5g55860 isoform X1"
                     /calculated_mol_wt=73556
     Region          31..583
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..664
                     /gene="LOC107921984"
                     /coded_by="XM_016851784.2:760..2754"
                     /db_xref="GeneID:107921984"
ORIGIN      
        1 myntrvitnk qnimvakgrq natdsqkvev geidtsapfq svkdavtlfg egafsgekpa
       61 mkkakahsae rvlaketqlh ltqkelnklk eqlsnaeitk aqalvelera kktaeelshk
      121 lktvneskdc aakatdaakn kakqieeans gilpgpdgtr sqdsetareq ymivitelda
      181 akqelrkvrq dcdasleaki aafnqteeae haakvnmekv gelsreisyv qesigqvkla
      241 sletqqeqak mfaekdtqkq lykatleest kkllalknef dpklmrnlea qlletdnqig
      301 slqkqmesak asdlesvrti tseldgakes lqkvaeeens lrslveslkv elenvnkehs
      361 elkekeaete siagnlhvkl rkskseleaf lseesktrga caemlstlqq lsvetenapr
      421 kaeemkkeae klkleaeasr ialqeadkrl vvaleeaeaa keaetraldq ikmlsektna
      481 arastsesga nitisreefe slsrkveesd niaemkvaaa maqveavkas enealkrlea
      541 tqkeiedmkv atadalkrae maeaakrtve gelrkwreke qkkavaaasr ilieaqmste
      601 sspqhyriqk qnpaekivqa kmlekekssv skkvllpnis gifnrrknqi eggspsylpg
      661 ektl
//
LOCUS       XP_016707275             651 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At5g55860 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707275
VERSION     XP_016707275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851786.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..651
                     /product="WEB family protein At5g55860 isoform X2"
                     /calculated_mol_wt=71979
     Region          18..570
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..651
                     /gene="LOC107921984"
                     /coded_by="XM_016851786.2:771..2726"
                     /db_xref="GeneID:107921984"
ORIGIN      
        1 mvakgrqnat dsqkvevgei dtsapfqsvk davtlfgega fsgekpamkk akahsaervl
       61 aketqlhltq kelnklkeql snaeitkaqa lvelerakkt aeelshklkt vneskdcaak
      121 atdaaknkak qieeansgil pgpdgtrsqd setareqymi viteldaakq elrkvrqdcd
      181 asleakiaaf nqteeaehaa kvnmekvgel sreisyvqes igqvklasle tqqeqakmfa
      241 ekdtqkqlyk atleestkkl lalknefdpk lmrnleaqll etdnqigslq kqmesakasd
      301 lesvrtitse ldgakeslqk vaeeenslrs lveslkvele nvnkehselk ekeaetesia
      361 gnlhvklrks kseleaflse esktrgacae mlstlqqlsv etenaprkae emkkeaeklk
      421 leaeasrial qeadkrlvva leeaeaakea etraldqikm lsektnaara stsesganit
      481 isreefesls rkveesdnia emkvaaamaq veavkasene alkrleatqk eiedmkvata
      541 dalkraemae aakrtvegel rkwrekeqkk avaaasrili eaqmstessp qhyriqkqnp
      601 aekivqakml ekekssvskk vllpnisgif nrrknqiegg spsylpgekt l
//
LOCUS       XP_016707276             651 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At5g55860 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707276
VERSION     XP_016707276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..651
                     /product="WEB family protein At5g55860 isoform X2"
                     /calculated_mol_wt=71979
     Region          18..570
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..651
                     /gene="LOC107921984"
                     /coded_by="XM_016851787.2:688..2643"
                     /db_xref="GeneID:107921984"
ORIGIN      
        1 mvakgrqnat dsqkvevgei dtsapfqsvk davtlfgega fsgekpamkk akahsaervl
       61 aketqlhltq kelnklkeql snaeitkaqa lvelerakkt aeelshklkt vneskdcaak
      121 atdaaknkak qieeansgil pgpdgtrsqd setareqymi viteldaakq elrkvrqdcd
      181 asleakiaaf nqteeaehaa kvnmekvgel sreisyvqes igqvklasle tqqeqakmfa
      241 ekdtqkqlyk atleestkkl lalknefdpk lmrnleaqll etdnqigslq kqmesakasd
      301 lesvrtitse ldgakeslqk vaeeenslrs lveslkvele nvnkehselk ekeaetesia
      361 gnlhvklrks kseleaflse esktrgacae mlstlqqlsv etenaprkae emkkeaeklk
      421 leaeasrial qeadkrlvva leeaeaakea etraldqikm lsektnaara stsesganit
      481 isreefesls rkveesdnia emkvaaamaq veavkasene alkrleatqk eiedmkvata
      541 dalkraemae aakrtvegel rkwrekeqkk avaaasrili eaqmstessp qhyriqkqnp
      601 aekivqakml ekekssvskk vllpnisgif nrrknqiegg spsylpgekt l
//
LOCUS       XP_016707277             434 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707277
VERSION     XP_016707277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851788.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..434
                     /product="uncharacterized protein"
                     /calculated_mol_wt=47955
     Region          84..293
                     /region_name="Suc_Fer-like"
                     /note="Sucrase/ferredoxin-like; pfam06999"
                     /db_xref="CDD:462062"
     CDS             1..434
                     /gene="LOC107921985"
                     /coded_by="XM_016851788.2:240..1544"
                     /db_xref="GeneID:107921985"
ORIGIN      
        1 mmsssreree sltfptnpss tsspitvsdh ldrylqdpss higsasgsys negplaaeta
       61 spsnsdvefg fsrhdfrqqs pisgtvqfyq rhvflcyksp svwpprieaa efdrlprlls
      121 aavlarkadm iketrltice ghdgtetsng dvlifpdmir yrrlthfdvd tfveevlvkn
      181 gewlpgtpek legsfvfvcs hgsrdrrcgv cgpplvsrfk eeivlyglqg rvsvspcshi
      241 gghkyagnvi ifgsnfngev tghwygyvtp ddvptllewh igkgeiidal wrgqmglsee
      301 eqkkfqelrr langettkea tqrqmdemni tacqsqdnla sccqrnsssc chdppksdiv
      361 gtdegvaklt pekkksgkkl isrinsgkga svrkvcakpt wfesweredt yaalavvcaa
      421 asiavayscy kqls
//
LOCUS       XP_016707278             337 aa            linear   PLN 06-AUG-2024
DEFINITION  SEC14 cytosolic factor [Gossypium hirsutum].
ACCESSION   XP_016707278
VERSION     XP_016707278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..337
                     /product="SEC14 cytosolic factor"
                     /calculated_mol_wt=38137
     Region          8..59
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; pfam03765"
                     /db_xref="CDD:461043"
     Region          91..242
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..337
                     /gene="LOC107921986"
                     /coded_by="XM_016851789.2:327..1340"
                     /db_xref="GeneID:107921986"
ORIGIN      
        1 msnahqeaik qflslmetvd ermkstfqnm hqgyptealv rflkardwnv qkahkmliec
       61 lqwriqneid nilakpiipt dlyravrdsq lvglsgyske glpviaigvg lstydkasvn
      121 yyvqshiqmn eyrdrvvlpt atekygrhis tclkvldmtg lklsalnqik ilttistidd
      181 lnypektqty yivnapyifs acwkavkpll qertkrkiqv lqgsgkdell kimdysslph
      241 fcrkegsgst rhssngtadn cfsldhtyhq qlytyikhqa thkqtnspik qgsvhvefpe
      301 pdpddtaial tieselhkfa dqnglcksln glkvngv
//
LOCUS       XP_016707490             583 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PK isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707490
VERSION     XP_016707490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="serine/threonine-protein kinase D6PK isoform X1"
                     /calculated_mol_wt=64160
     Region          193..553
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(200..204,208,221,223,255,271..272,274,278,280,319,
                     321,323..324,326,336..337,340,430..435,462,468,471)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(200..204,208,221,223,255,272..274,278,319,321,
                     323..324,326,336..337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(204,278,280,319,321,323,340,430..435,462,468,471)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(336..345,384,427..435)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          <368..391
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..583
                     /gene="LOC107922139"
                     /coded_by="XM_016852001.2:449..2200"
                     /db_xref="GeneID:107922139"
ORIGIN      
        1 maskssvihs peklrkpfgs etgegnscrl spiqitktsd lapvtprivp kkqnsvvite
       61 gmqpskphkl esvdslmkkv dsglslsgrs pedsreqekk alehgidsas dkssdgatgl
      121 aktsgsakvg dhpdynesgk scicrgstss gvsdestcss lsssinkphk andirweaiq
      181 avrakdgvlg lnhfrllkrl gcgdigsvyl aelsgtkcyf amkvmdkasl asckkllraq
      241 tereilqsld hpflptlyth fetdkfsclv mefcpggdlh tlrqrqpgkh ftelavkfyv
      301 aevllaleyl hmlgivyrdl kpenvlvred ghimlsdfdl slrcafnptl vnlstpesep
      361 lrknstycvq paciepsciq pscvvptcfs prffsskskk drkpknemgn qvsplpelia
      421 eptnarsmsf vgtheylape iikgqghgsa vdwwtfgifl yellfgktpf kgsgnratlf
      481 nvvgqplrfp espvvsfaar dlirgllvke pqhrlaykrg ateikqhpff egvnwalirc
      541 asppeipkpv eieripvpts sagdkpavpv tkdqknylef dff
//
LOCUS       XP_016707489             583 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PK isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707489
VERSION     XP_016707489.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852000.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="serine/threonine-protein kinase D6PK isoform X1"
                     /calculated_mol_wt=64160
     Region          193..553
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(200..204,208,221,223,255,271..272,274,278,280,319,
                     321,323..324,326,336..337,340,430..435,462,468,471)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(200..204,208,221,223,255,272..274,278,319,321,
                     323..324,326,336..337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(204,278,280,319,321,323,340,430..435,462,468,471)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(336..345,384,427..435)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          <368..391
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..583
                     /gene="LOC107922139"
                     /coded_by="XM_016852000.2:416..2167"
                     /db_xref="GeneID:107922139"
ORIGIN      
        1 maskssvihs peklrkpfgs etgegnscrl spiqitktsd lapvtprivp kkqnsvvite
       61 gmqpskphkl esvdslmkkv dsglslsgrs pedsreqekk alehgidsas dkssdgatgl
      121 aktsgsakvg dhpdynesgk scicrgstss gvsdestcss lsssinkphk andirweaiq
      181 avrakdgvlg lnhfrllkrl gcgdigsvyl aelsgtkcyf amkvmdkasl asckkllraq
      241 tereilqsld hpflptlyth fetdkfsclv mefcpggdlh tlrqrqpgkh ftelavkfyv
      301 aevllaleyl hmlgivyrdl kpenvlvred ghimlsdfdl slrcafnptl vnlstpesep
      361 lrknstycvq paciepsciq pscvvptcfs prffsskskk drkpknemgn qvsplpelia
      421 eptnarsmsf vgtheylape iikgqghgsa vdwwtfgifl yellfgktpf kgsgnratlf
      481 nvvgqplrfp espvvsfaar dlirgllvke pqhrlaykrg ateikqhpff egvnwalirc
      541 asppeipkpv eieripvpts sagdkpavpv tkdqknylef dff
//
LOCUS       XP_016707491             583 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PK isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707491
VERSION     XP_016707491.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852002.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="serine/threonine-protein kinase D6PK isoform X1"
                     /calculated_mol_wt=64160
     Region          193..553
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(200..204,208,221,223,255,271..272,274,278,280,319,
                     321,323..324,326,336..337,340,430..435,462,468,471)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(200..204,208,221,223,255,272..274,278,319,321,
                     323..324,326,336..337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(204,278,280,319,321,323,340,430..435,462,468,471)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(336..345,384,427..435)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          <368..391
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..583
                     /gene="LOC107922139"
                     /coded_by="XM_016852002.2:243..1994"
                     /db_xref="GeneID:107922139"
ORIGIN      
        1 maskssvihs peklrkpfgs etgegnscrl spiqitktsd lapvtprivp kkqnsvvite
       61 gmqpskphkl esvdslmkkv dsglslsgrs pedsreqekk alehgidsas dkssdgatgl
      121 aktsgsakvg dhpdynesgk scicrgstss gvsdestcss lsssinkphk andirweaiq
      181 avrakdgvlg lnhfrllkrl gcgdigsvyl aelsgtkcyf amkvmdkasl asckkllraq
      241 tereilqsld hpflptlyth fetdkfsclv mefcpggdlh tlrqrqpgkh ftelavkfyv
      301 aevllaleyl hmlgivyrdl kpenvlvred ghimlsdfdl slrcafnptl vnlstpesep
      361 lrknstycvq paciepsciq pscvvptcfs prffsskskk drkpknemgn qvsplpelia
      421 eptnarsmsf vgtheylape iikgqghgsa vdwwtfgifl yellfgktpf kgsgnratlf
      481 nvvgqplrfp espvvsfaar dlirgllvke pqhrlaykrg ateikqhpff egvnwalirc
      541 asppeipkpv eieripvpts sagdkpavpv tkdqknylef dff
//
LOCUS       XP_016707492             522 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PKL2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707492
VERSION     XP_016707492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852003.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..522
                     /product="serine/threonine-protein kinase D6PKL2 isoform
                     X2"
                     /calculated_mol_wt=57644
     Region          132..492
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(139..143,147,160,162,194,210..211,213,217,219,258,
                     260,262..263,265,275..276,279,369..374,401,407,410)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(139..143,147,160,162,194,211..213,217,258,260,
                     262..263,265,275..276)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(143,217,219,258,260,262,279,369..374,401,407,410)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(275..284,323,366..374)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          <307..330
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..522
                     /gene="LOC107922139"
                     /coded_by="XM_016852003.2:500..2068"
                     /db_xref="GeneID:107922139"
ORIGIN      
        1 mqpskphkle svdslmkkvd sglslsgrsp edsreqekka lehgidsasd kssdgatgla
       61 ktsgsakvgd hpdynesgks cicrgstssg vsdestcssl sssinkphka ndirweaiqa
      121 vrakdgvlgl nhfrllkrlg cgdigsvyla elsgtkcyfa mkvmdkasla sckkllraqt
      181 ereilqsldh pflptlythf etdkfsclvm efcpggdlht lrqrqpgkhf telavkfyva
      241 evllaleylh mlgivyrdlk penvlvredg himlsdfdls lrcafnptlv nlstpesepl
      301 rknstycvqp aciepsciqp scvvptcfsp rffsskskkd rkpknemgnq vsplpeliae
      361 ptnarsmsfv gtheylapei ikgqghgsav dwwtfgifly ellfgktpfk gsgnratlfn
      421 vvgqplrfpe spvvsfaard lirgllvkep qhrlaykrga teikqhpffe gvnwalirca
      481 sppeipkpve ieripvptss agdkpavpvt kdqknylefd ff
//
LOCUS       XP_016707494             522 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase D6PKL2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707494
VERSION     XP_016707494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852005.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..522
                     /product="serine/threonine-protein kinase D6PKL2 isoform
                     X2"
                     /calculated_mol_wt=57644
     Region          132..492
                     /region_name="STKc_phototropin_like"
                     /note="Catalytic domain of Phototropin-like
                     Serine/Threonine Kinases; cd05574"
                     /db_xref="CDD:270726"
     Site            order(139..143,147,160,162,194,210..211,213,217,219,258,
                     260,262..263,265,275..276,279,369..374,401,407,410)
                     /site_type="active"
                     /db_xref="CDD:270726"
     Site            order(139..143,147,160,162,194,211..213,217,258,260,
                     262..263,265,275..276)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(143,217,219,258,260,262,279,369..374,401,407,410)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270726"
     Site            order(275..284,323,366..374)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270726"
     Region          <307..330
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     CDS             1..522
                     /gene="LOC107922139"
                     /coded_by="XM_016852005.2:533..2101"
                     /db_xref="GeneID:107922139"
ORIGIN      
        1 mqpskphkle svdslmkkvd sglslsgrsp edsreqekka lehgidsasd kssdgatgla
       61 ktsgsakvgd hpdynesgks cicrgstssg vsdestcssl sssinkphka ndirweaiqa
      121 vrakdgvlgl nhfrllkrlg cgdigsvyla elsgtkcyfa mkvmdkasla sckkllraqt
      181 ereilqsldh pflptlythf etdkfsclvm efcpggdlht lrqrqpgkhf telavkfyva
      241 evllaleylh mlgivyrdlk penvlvredg himlsdfdls lrcafnptlv nlstpesepl
      301 rknstycvqp aciepsciqp scvvptcfsp rffsskskkd rkpknemgnq vsplpeliae
      361 ptnarsmsfv gtheylapei ikgqghgsav dwwtfgifly ellfgktpfk gsgnratlfn
      421 vvgqplrfpe spvvsfaard lirgllvkep qhrlaykrga teikqhpffe gvnwalirca
      481 sppeipkpve ieripvptss agdkpavpvt kdqknylefd ff
//
LOCUS       XP_016708265             380 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit RPAC1 [Gossypium
            hirsutum].
ACCESSION   XP_016708265
VERSION     XP_016708265.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852776.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..380
                     /product="DNA-directed RNA polymerases I and III subunit
                     RPAC1"
                     /calculated_mol_wt=42725
     Region          73..378
                     /region_name="RNAP_I_II_AC40"
                     /note="AC40 subunit of Eukaryotic RNA polymerase (RNAP) I
                     and RNAP III; cd07032"
                     /db_xref="CDD:132910"
     Site            order(73..75,80..81,89,93,95..96,99,102,258..259,358,362,
                     365..366,369,375..376)
                     /site_type="other"
                     /note="AC40 - AC19 heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     Site            order(98,101..102,106,126,128..129,132..133,260..261,
                     266..268,270..271,273..274)
                     /site_type="other"
                     /note="AC40 - A135(C128) interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     Site            order(113..119,127,132,259..260,262)
                     /site_type="other"
                     /note="AC40 - RPB12 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     Site            order(124,133,136,179,234..236,239,241,262,267..268,350,
                     352)
                     /site_type="other"
                     /note="AC40 - RPB10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132910"
     CDS             1..380
                     /gene="LOC107922651"
                     /coded_by="XM_016852776.2:220..1362"
                     /db_xref="GeneID:107922651"
ORIGIN      
        1 maegageekk kfsiwdlpdv pvgqlpphle lqrsrvscnk dapihtesiq ysgayasmgi
       61 dnssrldrfs nnfrvevvrl neddmefdmi gidaaiansf rriliaelpt maiekvlian
      121 ntsiiqdevl ahrlglvpir vdprlfdyls endqpneknt vvfklhvqck rgspritvks
      181 dalkwlpngs elvketrnat sdssskpety tyfgcsqeti pefvknpiip kypdiiiakl
      241 gpgqeielea havkgigkth akwspvataw yrmlpevvll edieddlaee lkskcpvnvf
      301 diedlgkgrr ratvarprac tlcrecirgd dwekrvalrr vkdhfiftie stgalppevl
      361 fteavkiled kcervitels
//
LOCUS       XP_016708008             641 aa            linear   PLN 06-AUG-2024
DEFINITION  26S rRNA (cytosine-C(5))-methyltransferase NOP2B [Gossypium
            hirsutum].
ACCESSION   XP_016708008
VERSION     XP_016708008.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852519.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..641
                     /product="26S rRNA (cytosine-C(5))-methyltransferase
                     NOP2B"
                     /calculated_mol_wt=71972
     Region          240..516
                     /region_name="nop2p"
                     /note="NOL1/NOP2/sun family putative RNA methylase;
                     TIGR00446"
                     /db_xref="CDD:188051"
     CDS             1..641
                     /gene="LOC107922470"
                     /coded_by="XM_016852519.2:65..1990"
                     /db_xref="GeneID:107922470"
ORIGIN      
        1 maanknkgak skhpplkkkq rnhlftekkr ptkkdevfdd vsdgqseeeq leeaedlldg
       61 deqvsdfdda sdisddddap laddflkgsd dededrgsgs tsgsgsdsdg tdieeksrai
      121 deqrereeed aqaemqlnik eesdefrlpt keeleaeqqr ppdlanlqmr ikdivrvlsk
      181 fkelrqegnt rkdyvdqlkm dlgsyygyne fligvlvdmf pvvelmelie afekprptci
      241 rantlrtrrr dladtlskrg veldqlskws kvglvvynsh vpigatpeyl agfyyiqgas
      301 sflpvmalap qekervvdma aapggkttyv aalmknsgli fanemketrl ksltanlhrm
      361 gvantivcny dgrelpkvlg qnsvdrvlld apcsgtgvit kdpsvktsks lddiqkcahl
      421 qkqlilaaid mvdansktgg yivystcsmm vpeneavidy alkkrdvkvv pcgldfgcpg
      481 yirfrehrfh tslentrrfy phvhnmdgff vaklkkmsnt kknlvssdgs etveqtqrpe
      541 eihsdednkk eieqqkikkq spkgkkkslk akglsgngkv espptlknrd rsengkvela
      601 atskkrkrkf pskeeiskar eekrkamrgq kkqpkedktg i
//
LOCUS       XP_016708076             765 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708076
VERSION     XP_016708076.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852587.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..765
                     /product="GBF-interacting protein 1-like isoform X1"
                     /calculated_mol_wt=80678
     Region          25..76
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..765
                     /gene="LOC107922511"
                     /coded_by="XM_016852587.2:191..2488"
                     /db_xref="GeneID:107922511"
ORIGIN      
        1 msnkgsgggg ggggggvgeg savsipdnak ntiqsireit gkqhsdeeiy avlnecfmdp
       61 netaqkllyl dtfhevkrkr ekkkeiagtk gpagrgrrgn ygkdvvgarn asapkengvi
      121 htsdrgsasf pasqkvknna apcmtktptt ipngtktlpn gisnqghglp lsvagvnset
      181 kdglplvgpt tisvqltvte apanisaqsf ssltrdqekf ssissaspts atsttlsgvy
      241 ssasdpllvp teswhvgdag tteqesgcql esaetdhiqg nknapfdinl sntektasei
      301 rssmheknpp rkskvaeqtk qskpiepall qvvtseiaav tdkansqlla dsnfpngqhv
      361 tfpthfrvse altdgltfgs fdasfgqvtr hgigtsaeit aaypietsqg sdetaeepss
      421 rskgmlsame gdsadqpqpp pdfekapksd diissdanlk vdqstqemrl hsegnqsvip
      481 ndprygfglm pasashfvqf dgleaqahdv srpanfvngn ssdpsgnsap pvqstvtaap
      541 pavhlyrqpf ppnyfpylhy fppfymhypp hqflnssgvp qqpstgnmym ppgvkfplsq
      601 lkpgsnagnp alltipsgyg qltsppvgfn lsvpsvtsgs saskedlaas qlkenhiytt
      661 gslvgmkvrl sgclhwgkdl tnlqvnslyn lslygqqvpf spaaqaghga faglyqppqt
      721 laspsnvnnl lqqsqpiaaa vetasaltga yqqpqlaqmn rnsny
//
LOCUS       XP_016708078             763 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708078
VERSION     XP_016708078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852589.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..763
                     /product="GBF-interacting protein 1-like isoform X2"
                     /calculated_mol_wt=80492
     Region          25..76
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..763
                     /gene="LOC107922511"
                     /coded_by="XM_016852589.2:192..2483"
                     /db_xref="GeneID:107922511"
ORIGIN      
        1 msnkgsgggg ggggggvgeg savsipdnak ntiqsireit gkqhsdeeiy avlnecfmdp
       61 netaqkllyl dtfhevkrkr ekkkeiagtk gpagrgrrgn ydvvgarnas apkengviht
      121 sdrgsasfpa sqkvknnaap cmtktpttip ngtktlpngi snqghglpls vagvnsetkd
      181 glplvgptti svqltvteap anisaqsfss ltrdqekfss issasptsat sttlsgvyss
      241 asdpllvpte swhvgdagtt eqesgcqles aetdhiqgnk napfdinlsn tektaseirs
      301 smheknpprk skvaeqtkqs kpiepallqv vtseiaavtd kansqllads nfpngqhvtf
      361 pthfrvseal tdgltfgsfd asfgqvtrhg igtsaeitaa ypietsqgsd etaeepssrs
      421 kgmlsamegd sadqpqpppd fekapksddi issdanlkvd qstqemrlhs egnqsvipnd
      481 prygfglmpa sashfvqfdg leaqahdvsr panfvngnss dpsgnsappv qstvtaappa
      541 vhlyrqpfpp nyfpylhyfp pfymhypphq flnssgvpqq pstgnmympp gvkfplsqlk
      601 pgsnagnpal ltipsgygql tsppvgfnls vpsvtsgssa skedlaasql kenhiyttgs
      661 lvgmkvrlsg clhwgkdltn lqvnslynls lygqqvpfsp aaqaghgafa glyqppqtla
      721 spsnvnnllq qsqpiaaave tasaltgayq qpqlaqmnrn sny
//
LOCUS       XP_016708079             762 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016708079
VERSION     XP_016708079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852590.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..762
                     /product="GBF-interacting protein 1-like isoform X3"
                     /calculated_mol_wt=80364
     Region          25..76
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..762
                     /gene="LOC107922511"
                     /coded_by="XM_016852590.2:191..2479"
                     /db_xref="GeneID:107922511"
ORIGIN      
        1 msnkgsgggg ggggggvgeg savsipdnak ntiqsireit gkqhsdeeiy avlnecfmdp
       61 netaqkllyl dtfhevkrkr ekkkeiagtk gpagrgrrgn ygkgarnasa pkengvihts
      121 drgsasfpas qkvknnaapc mtktpttipn gtktlpngis nqghglplsv agvnsetkdg
      181 lplvgpttis vqltvteapa nisaqsfssl trdqekfssi ssasptsats ttlsgvyssa
      241 sdpllvptes whvgdagtte qesgcqlesa etdhiqgnkn apfdinlsnt ektaseirss
      301 mheknpprks kvaeqtkqsk piepallqvv tseiaavtdk ansqlladsn fpngqhvtfp
      361 thfrvsealt dgltfgsfda sfgqvtrhgi gtsaeitaay pietsqgsde taeepssrsk
      421 gmlsamegds adqpqpppdf ekapksddii ssdanlkvdq stqemrlhse gnqsvipndp
      481 rygfglmpas ashfvqfdgl eaqahdvsrp anfvngnssd psgnsappvq stvtaappav
      541 hlyrqpfppn yfpylhyfpp fymhypphqf lnssgvpqqp stgnmymppg vkfplsqlkp
      601 gsnagnpall tipsgygqlt sppvgfnlsv psvtsgssas kedlaasqlk enhiyttgsl
      661 vgmkvrlsgc lhwgkdltnl qvnslynlsl ygqqvpfspa aqaghgafag lyqppqtlas
      721 psnvnnllqq sqpiaaavet asaltgayqq pqlaqmnrns ny
//
LOCUS       XP_016708080             683 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1-like isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016708080
VERSION     XP_016708080.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852591.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..683
                     /product="GBF-interacting protein 1-like isoform X4"
                     /calculated_mol_wt=71951
     Region          25..76
                     /region_name="GIP1_N"
                     /note="GBF-interacting protein 1 N-terminal; pfam06972"
                     /db_xref="CDD:462056"
     CDS             1..683
                     /gene="LOC107922511"
                     /coded_by="XM_016852591.2:190..2241"
                     /db_xref="GeneID:107922511"
ORIGIN      
        1 msnkgsgggg ggggggvgeg savsipdnak ntiqsireit gkqhsdeeiy avlnecfmdp
       61 netaqkllyl dtfhevkrkr ekkkeiagtk gpagrgrrgn ygkdvvgarn asapkengvi
      121 htsdrgsasf pasqkvknna apcmtktptt ipngtktlpn gisnqghglp lsvagvnset
      181 kdglplvgpt tisvqltvte apanisaqsf ssltrdqekf ssissaspts atsttlsgvy
      241 ssasdpllvp teswhvgdag tteqesgcql esaetdhiqg nknapfdinl sntektasei
      301 rssmheknpp rkskvaeqtk qskpiepall qvvtseiaav tdkansqlla dsnfpngqhv
      361 tfpthfrvse altdgltfgs fdasfgqvtr hgigtsaeit aaypietsqg sdetaeepss
      421 rskgmlsame gdsadqpqpp pdfekapksd diissdanlk vdqstqemrl hsegnqsvip
      481 ndprygfglm pasashfvqf dgleaqahdv srpanfvngn ssdpsgnsap pvqstvtaap
      541 pavhlyrqpf ppnyfpylhy fppfymhypp hqflnssgvp qqpstgnmym ppgvkfplsq
      601 lkpgsnagnp alltipsgyg qltsppvgfn lsvpsvtsgs saskedlaas qlkenhiytt
      661 gslnegsalw mpalgqrfnq lag
//
LOCUS       XP_040942991             622 aa            linear   PLN 06-AUG-2024
DEFINITION  GBF-interacting protein 1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040942991
VERSION     XP_040942991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087057.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..622
                     /product="GBF-interacting protein 1 isoform X5"
                     /calculated_mol_wt=65766
     CDS             1..622
                     /gene="LOC107922511"
                     /coded_by="XM_041087057.1:400..2268"
                     /db_xref="GeneID:107922511"
ORIGIN      
        1 mtktpttipn gtktlpngis nqghglplsv agvnsetkdg lplvgpttis vqltvteapa
       61 nisaqsfssl trdqekfssi ssasptsats ttlsgvyssa sdpllvptes whvgdagtte
      121 qesgcqlesa etdhiqgnkn apfdinlsnt ektaseirss mheknpprks kvaeqtkqsk
      181 piepallqvv tseiaavtdk ansqlladsn fpngqhvtfp thfrvsealt dgltfgsfda
      241 sfgqvtrhgi gtsaeitaay pietsqgsde taeepssrsk gmlsamegds adqpqpppdf
      301 ekapksddii ssdanlkvdq stqemrlhse gnqsvipndp rygfglmpas ashfvqfdgl
      361 eaqahdvsrp anfvngnssd psgnsappvq stvtaappav hlyrqpfppn yfpylhyfpp
      421 fymhypphqf lnssgvpqqp stgnmymppg vkfplsqlkp gsnagnpall tipsgygqlt
      481 sppvgfnlsv psvtsgssas kedlaasqlk enhiyttgsl vgmkvrlsgc lhwgkdltnl
      541 qvnslynlsl ygqqvpfspa aqaghgafag lyqppqtlas psnvnnllqq sqpiaaavet
      601 asaltgayqq pqlaqmnrns ny
//
LOCUS       XP_016707599             653 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 245 [Gossypium hirsutum].
ACCESSION   XP_016707599
VERSION     XP_016707599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..653
                     /product="transmembrane protein 245"
                     /calculated_mol_wt=72320
     Region          <391..643
                     /region_name="PerM"
                     /note="Predicted PurR-regulated permease PerM [General
                     function prediction only]; COG0628"
                     /db_xref="CDD:440393"
     CDS             1..653
                     /gene="LOC107922207"
                     /coded_by="XM_016852110.2:302..2263"
                     /db_xref="GeneID:107922207"
ORIGIN      
        1 melvpyssep kpkpssstlp wqdmfrsasv rkpspapgns dappnqhhap pqtpnstdpd
       61 hknslsgdpq vrlalyiama haglaftifi lyaickllqe yfrpiqwail csiplrgiqe
      121 tlvgfwsepl rlgltetvla vpvavfkafi gtlvdikdvc lrvflkrpks nlsrrkrsgf
      181 pmlvrwlvaf avfviayeri ggvgslgiiv lgfvistkni ddslsavssf rsnsfrrsrm
      241 sayfttrilk rldtivaigl iiglfvgffa gatffsykig vegkdavvsv kshveesnya
      301 ermgvkrwme endvpgmvdk yttqfyetvs eqidnlamqy nmtefvtgik hfvitsttss
      361 svrstalmtp spytekflsl rkrvsnrewg qiytevdaif reliitredl vqkakgfavk
      421 gadvsqrvla ssasvlggga kimftignsi lygaaevfnf vsqlmvffwv lyylitsesg
      481 gvteqvmsmi piskparirc vevldeaisg vllataeiaf fqgcltwlmf rlfeihfvym
      541 stvlafispl lpifppwfat ipaaielvle sryivavvfs ishivlmdyg ateiqesipg
      601 ysayltglsi iggmtlfpsa vegaimgpli ttvvialkdl yvefvleepk kkd
//
LOCUS       XP_016707882             342 aa            linear   PLN 06-AUG-2024
DEFINITION  farnesyl pyrophosphate synthase [Gossypium hirsutum].
ACCESSION   XP_016707882
VERSION     XP_016707882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..342
                     /product="farnesyl pyrophosphate synthase"
                     /calculated_mol_wt=39458
     Region          33..295
                     /region_name="polyprenyl_synt"
                     /note="Polyprenyl synthetase; pfam00348"
                     /db_xref="CDD:459773"
     CDS             1..342
                     /gene="LOC107922380"
                     /coded_by="XM_016852393.2:285..1313"
                     /db_xref="GeneID:107922380"
ORIGIN      
        1 msdikpkfle vysalksell ddpafeftdn srqwvermld ynvpggklnr glsvidsfkl
       61 lkegkelsdd efflacalgw ciewlqayfl vlddimdgsh trrghpcwfr lpqvgmiais
      121 dglilrnqif rilkkhfrgk pyyvdlldlf nevefqtasg qmidlittlq gekdlskysl
      181 sihrkivqyk tayysfylpv acallmagen ldnhtevknv lvemgtyfqv qddfldcfgd
      241 pevigkvgtd iedfkcswlv vkaleranee qkkllyenyg kddrvclakv kelyqtldiq
      301 gafeeyesks yekimkqieg hpskavqavl ksflakiykr qk
//
LOCUS       XP_016707880             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_016707880
VERSION     XP_016707880.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707880.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_016852391.2:1190..2209"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_016707872             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_016707872
VERSION     XP_016707872.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707872.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_016852383.2:1122..2141"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_016707873             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_016707873
VERSION     XP_016707873.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707873.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_016852384.2:1058..2077"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_016707879             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_016707879
VERSION     XP_016707879.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707879.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_016852390.2:880..1899"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_040942992             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_040942992
VERSION     XP_040942992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087058.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_041087058.1:810..1829"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_040942993             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_040942993
VERSION     XP_040942993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087059.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_041087059.1:937..1956"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_016707874             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase At4g11680 [Gossypium hirsutum].
ACCESSION   XP_016707874
VERSION     XP_016707874.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707874.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase At4g11680"
                     /calculated_mol_wt=38894
     Region          292..337
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(293,296,311,313,316,319,330,333)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..339
                     /gene="LOC107922378"
                     /coded_by="XM_016852385.2:1012..2031"
                     /db_xref="GeneID:107922378"
ORIGIN      
        1 mntrhsfqpd smcnsstavp fssnptgeed rvaagsrnrs praasssili rmvmrmsrar
       61 wftflrrvfh yqngsrsdlg snpfnsstwm mlefltlviq isiitftlai akkekpvwpm
      121 riwivgydig calsllllyg ryhhlhitqg dgfgladveq qrtneesrst hlmnkcrtsl
      181 elffaiwfvm gnvwvfdsrf gsfhrapnlh vlcisllawn alcysfpfll flllcccvpl
      241 issllgynmn mgstdrgasd dqisrlpswr ykeistnsel dhnsdhtned pecciclaky
      301 kdkeevrqlp cshmfhlkcv dqwlriiscc plckqeler
//
LOCUS       XP_016708266             226 aa            linear   PLN 06-AUG-2024
DEFINITION  calcineurin B-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016708266
VERSION     XP_016708266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..226
                     /product="calcineurin B-like protein 3"
                     /calculated_mol_wt=25852
     Region          64..192
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..226
                     /gene="LOC107922652"
                     /coded_by="XM_016852777.2:249..929"
                     /db_xref="GeneID:107922652"
ORIGIN      
        1 mlqcidglkh lfasvlqccd idlykqsrgl vdpellaret vfsvseieal yelfkkissa
       61 viddglinke efqlalfktn kkeslfadrv fdlfdtkhng ilgfeefara lsvfhpnapi
      121 ddkidfsfql ydlkqqgfie rqevkqmvva tlaesgmnls ddviesiidk tfeeadtkhd
      181 gridkeewrs lvlrhpsllk nmtlqylkdi tttfpsfvfh sqvddt
//
LOCUS       XP_016708267             226 aa            linear   PLN 06-AUG-2024
DEFINITION  calcineurin B-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016708267
VERSION     XP_016708267.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852778.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..226
                     /product="calcineurin B-like protein 3"
                     /calculated_mol_wt=25852
     Region          64..192
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..226
                     /gene="LOC107922652"
                     /coded_by="XM_016852778.2:114..794"
                     /db_xref="GeneID:107922652"
ORIGIN      
        1 mlqcidglkh lfasvlqccd idlykqsrgl vdpellaret vfsvseieal yelfkkissa
       61 viddglinke efqlalfktn kkeslfadrv fdlfdtkhng ilgfeefara lsvfhpnapi
      121 ddkidfsfql ydlkqqgfie rqevkqmvva tlaesgmnls ddviesiidk tfeeadtkhd
      181 gridkeewrs lvlrhpsllk nmtlqylkdi tttfpsfvfh sqvddt
//
LOCUS       XP_016708268             226 aa            linear   PLN 06-AUG-2024
DEFINITION  calcineurin B-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016708268
VERSION     XP_016708268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..226
                     /product="calcineurin B-like protein 3"
                     /calculated_mol_wt=25852
     Region          64..192
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..226
                     /gene="LOC107922652"
                     /coded_by="XM_016852779.2:46..726"
                     /db_xref="GeneID:107922652"
ORIGIN      
        1 mlqcidglkh lfasvlqccd idlykqsrgl vdpellaret vfsvseieal yelfkkissa
       61 viddglinke efqlalfktn kkeslfadrv fdlfdtkhng ilgfeefara lsvfhpnapi
      121 ddkidfsfql ydlkqqgfie rqevkqmvva tlaesgmnls ddviesiidk tfeeadtkhd
      181 gridkeewrs lvlrhpsllk nmtlqylkdi tttfpsfvfh sqvddt
//
LOCUS       XP_016707324             699 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock cognate protein 80 [Gossypium hirsutum].
ACCESSION   XP_016707324
VERSION     XP_016707324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851835.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..699
                     /product="heat shock cognate protein 80"
                     /calculated_mol_wt=79891
     Region          4..699
                     /region_name="HSP90"
                     /note="Hsp90 protein; cl46693"
                     /db_xref="CDD:481033"
     CDS             1..699
                     /gene="LOC107922010"
                     /coded_by="XM_016851835.2:209..2308"
                     /db_xref="GeneID:107922010"
ORIGIN      
        1 maetetfafq aeinqllsli intfysnkei flrelisnss daldkirfes ltdkskldaq
       61 pelfihivpd ktnntlsiid sgvgmtkadl vnnlgtiars gtkefmeala agadvsmigq
      121 fgvgfysayl vaekvvvttk hnddeqyvwe sqaggsftvt rdttgesigr gtkitlflke
      181 dqleyleerr lkdlikkhse fisypislwi ektiekeisd dedeeekkde egkvedvdee
      241 kekeekkkkk ikevshewsl vnkqkpiwmr kpeeitkeey aafyksltnd weehlavkhf
      301 svegqlefka ilfvpkrapf dlfdtrkkpn niklyvrrvf imdnceelip eflgfvkgiv
      361 dsedlplnis remlqqnkil kvirknlvkk cielffeiae nkedynkfye afsknlklgi
      421 hedsqnrnki aellryhstk sgdemtslkd yvtrmkegqn diyyitgesk kavenspfle
      481 klkkkgyevl fmvdaideya vgqlkefegk klvsatkegl kldesedekk kkealkekfe
      541 glckvikdvl gdkvekvivs drvvdspccl vtgeygwtan merimkaqal rdnsmagyms
      601 skktmeinpe npimeelrkr adadkndksv kdlvlllfet alltsgfsld dpntfgnrih
      661 rmlklglsid edagdadada dmppledadg egskmeevd
//
LOCUS       XP_040942995            1100 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat receptor-like serine/threonine-protein kinase
            RGI4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942995
VERSION     XP_040942995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087061.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1100
                     /product="leucine-rich repeat receptor-like
                     serine/threonine-protein kinase RGI4 isoform X1"
                     /calculated_mol_wt=119410
     Region          14..1043
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          103..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          175..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          224..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          248..271
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          272..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..338
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          368..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          392..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          416..432
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          464..487
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          488..511
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          512..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..557
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          558..581
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          582..605
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          606..630
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          631..653
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1100
                     /gene="LOC121213848"
                     /coded_by="XM_041087061.1:4352..7654"
                     /db_xref="GeneID:121213848"
ORIGIN      
        1 mpatprnlll ssnifsftll lsintllfyr cysideqgqa lltwknslns sgdalkswss
       61 ldatpcrwfg ihcnsqgevv eirlkaielq gslpsnlqsl kslktlvlss tnltgtipke
      121 lgdqyeisyv dlsgnsltge ipleicrlsk letlslnsnf legevpsgig nlsslvyltl
      181 ydnqlsgeip ksigdlrklq vfraggnknl kgelpweign ctslvmlgla etsisgslps
      241 slgmlkriqt iaiytslisg pipeeigncs elqnlylyqn sisgpipsqv gqlsklqgll
      301 lwqnnlvgsi pdelgsctel tmvdlsdnhl tgsiprsigk llklqelqls vnqlsgtips
      361 eisncielth leidnnaisg eipvlignlk sltlffawqn kltgnipdsl sqcqdleaid
      421 lsynslfgsi pkeifvlrnl tkllllsndl sgfippdign ctnlyrlrln dnklagtips
      481 eigklkglnf vdlsnnrlvg gippsingiq nlefldlhsn gitgslpdsl ptslqymdis
      541 dnrligplth gigsltqltk lnlgrnqlsg ripsellacs klqllnlgdn gffgeipkel
      601 gqipaleisl nlscnqfsge ipsefsgltk lavldlshnk fsgkldnlas lqnlvslnvs
      661 fndfsgelpn spffrklpls dlesnkdlyi sngvvtsadi ehsrhvrpav klamsilisg
      721 savlvllaiy mlvrarfann glmeddnwev tlyqkldlsi ddivhnltsa nvigtgssgv
      781 vyrviipnge tlavkkmwss eesgaftsei etlgsirhrn ivrllgwgsn rnlkllfyny
      841 lpngslssll hgagkggaew earydvmlgv ahalaylhhd cvpailhgdv kamnvllgag
      901 yepfladfgl arviksnedd kfsklsprph lagsygymap ehatmqrite ksdvysfgvv
      961 llevltgrhp ldptlpggah lvqwvrdhla nkrnpsdild pklrgradpa mhemlqtlav
     1021 sclcvsarpd grptmkdvva mlkeihhvet srdiskgtst apqpqspqpp trtvvsrgss
     1081 ncsfafsdds iqssgggfnl
//
LOCUS       XP_040942996             980 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase RGI3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040942996
VERSION     XP_040942996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087062.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..980
                     /product="LRR receptor-like serine/threonine-protein
                     kinase RGI3 isoform X2"
                     /calculated_mol_wt=106168
     Region          14..931
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          175..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          272..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          345..367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          368..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          392..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          414..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          438..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          486..510
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          511..533
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..980
                     /gene="LOC121213848"
                     /coded_by="XM_041087062.1:4352..7294"
                     /db_xref="GeneID:121213848"
ORIGIN      
        1 mpatprnlll ssnifsftll lsintllfyr cysideqgqa lltwknslns sgdalkswss
       61 ldatpcrwfg ihcnsqgevv eirlkaielq gslpsnlqsl kslktlvlss tnltgtipke
      121 lgdqyeisyv dlsgnsltge ipleicrlsk letlslnsnf legevpsgig nlsslvyltl
      181 ydnqlsgeip ksigdlrklq vfraggnknl kgelpweign ctslvmlgla etsisgslps
      241 slgmlkriqt iaiytslisg pipeeigncs elqnlylyqn sisgpipsqv gqlsklqgll
      301 lwqnnlvgsi pdelgsctel tmvdlsdnhl tgsiprsigk llklqelqls vnqlsgtips
      361 eigklkglnf vdlsnnrlvg gippsingiq nlefldlhsn gitgslpdsl ptslqymdis
      421 dnrligplth gigsltqltk lnlgrnqlsg ripsellacs klqllnlgdn gffgeipkel
      481 gqipaleisl nlscnqfsge ipsefsgltk lavldlshnk fsgkldnlas lqnlvslnvs
      541 fndfsgelpn spffrklpls dlesnkdlyi sngvvtsadi ehsrhvrpav klamsilisg
      601 savlvllaiy mlvrarfann glmeddnwev tlyqkldlsi ddivhnltsa nvigtgssgv
      661 vyrviipnge tlavkkmwss eesgaftsei etlgsirhrn ivrllgwgsn rnlkllfyny
      721 lpngslssll hgagkggaew earydvmlgv ahalaylhhd cvpailhgdv kamnvllgag
      781 yepfladfgl arviksnedd kfsklsprph lagsygymap ehatmqrite ksdvysfgvv
      841 llevltgrhp ldptlpggah lvqwvrdhla nkrnpsdild pklrgradpa mhemlqtlav
      901 sclcvsarpd grptmkdvva mlkeihhvet srdiskgtst apqpqspqpp trtvvsrgss
      961 ncsfafsdds iqssgggfnl
//
LOCUS       XP_016706579             210 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016706579
VERSION     XP_016706579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851090.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..210
                     /product="peptidyl-prolyl cis-trans isomerase FKBP16-1,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=23477
     Region          91..209
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..210
                     /gene="LOC107921209"
                     /coded_by="XM_016851090.2:76..708"
                     /db_xref="GeneID:107921209"
ORIGIN      
        1 mhlqlqvlpf qtlqqlpcsf nfpprqhkdv tikgshsrhp svsvkslprr vvlqlmgfsp
       61 islciyplfa apmqdmnepe virtlklsgg vriqeiiege greardgdyv qvnyvcrrsn
      121 gyfvhstvdq fsgesspvtl pldenqiikg lkdvltgmkv ggkrralipp svgyinenlk
      181 pipdefgprr sllshakepl ifevqllkil
//
LOCUS       XP_016706580             188 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016706580
VERSION     XP_016706580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851091.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="peptidyl-prolyl cis-trans isomerase FKBP16-1,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=20914
     Region          69..187
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..188
                     /gene="LOC107921209"
                     /coded_by="XM_016851091.2:93..659"
                     /db_xref="GeneID:107921209"
ORIGIN      
        1 mdrqhkdvti kgshsrhpsv svkslprrvv lqlmgfspis lciyplfaap mqdmnepevi
       61 rtlklsggvr iqeiiegegr eardgdyvqv nyvcrrsngy fvhstvdqfs gesspvtlpl
      121 denqiikglk dvltgmkvgg krralippsv gyinenlkpi pdefgprrsl lshakeplif
      181 evqllkil
//
LOCUS       XP_040942997            1180 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14F [Gossypium hirsutum].
ACCESSION   XP_040942997
VERSION     XP_040942997.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087063.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1180
                     /product="kinesin-like protein KIN-14F"
                     /calculated_mol_wt=131615
     Region          25..162
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     Region          164..212
                     /region_name="zf-CCHC_4"
                     /note="Zinc knuckle; pfam14392"
                     /db_xref="CDD:433930"
     Region          250..>484
                     /region_name="IQG1"
                     /note="Protein involved in regulation of cellular
                     morphogenesis/cytokinesis [Cell division and chromosome
                     partitioning / Signal transduction mechanisms]; COG5261"
                     /db_xref="CDD:227586"
     Region          259..370
                     /region_name="CH_AtKIN14-like"
                     /note="calponin homology (CH) domain found in Arabidopsis
                     thaliana Kinesin-like KIN-14 protein family; cd21203"
                     /db_xref="CDD:409052"
     Site            order(259,263,328,330..331,334..335,337,344..352,358,
                     360..361,363..364,367..368)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409052"
     Region          635..967
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(645..646,721..728,833..834,871..876)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     CDS             1..1180
                     /gene="LOC121213849"
                     /coded_by="XM_041087063.1:1..3543"
                     /db_xref="GeneID:121213849"
ORIGIN      
        1 metawiegkv ltldeseage ldgrrlallg kiiadkplsk ggvqgvfrrv wgewrdftit
       61 elsentflft fkearaaeqi ledgpwsvmg yciclhrwqp gltldeldfs qvaywvqvhg
      121 lsldqmspkn akkvgdqigk vleiedpiss hgirrgffri rvlidvskpl psgfwasrag
      181 ksnvwvsfky ehladfcyrc gcvghvefhc dkdtvmsipd pslpkygpwm ranpsvssmk
      241 alaemekaph kakqvmasrr yqaaewlrqm dqvameflpk dpseeefrra lcngfilcnv
      301 lnkvnpgavp kvvkasmtss eaaespnqds enmtnflaav kdkqllafet sdmekggsin
      361 kvvdcilclk gyhewkkagg vgvwryggtv kitsspnelp naltateraa desgeelels
      421 kyeqlrefiq lsnkasiees kttnaltflf drfglwllqa yltdgnmdee fplnamvida
      481 flskivnnfs tllvsqgikl glflkkilka ddgpvsksdf ieatsdyidk rsnlqaatdi
      541 skayicignn evvlnsvcrs pgrveiltdl iqrhiedlkl ffretrlevr kfhsyweadi
      601 krlehhvrdl evasssylki lqenqmlfne vldlkgkiri ycrvrpilpg eskdqstvdy
      661 vgengsiliv nslrkgkdsk kvfsfdrvfg ptvsqeqiyt niqplirsvl dgynvcifay
      721 gqtgsgktyt msgydlntke twgvnfraic dlfqisktre dvieykvgvq mieiyneqvr
      781 dllvidgstk rldiynntql ngltvpdasw vpvsstqdvl dlirigqknr ivgptafner
      841 ssrshsiltv hvhgkelvsg sifkgslnlv dlagsermdk skvqgdrlke aqyinrslsa
      901 lgdvisalaq ksthipyrns kltqilqnsl gghaktlmlv hispepdaig etistlkfae
      961 rvasielgaa rsnketddil elkeeitnlk lalekkeaev eqfkvgnags itpsqkakvl
     1021 rfgissnfkp etyqrpnddt kgseartvss aklrrskfss aligkdislk vpeerasrlg
     1081 kpqsptppvr rylsgdkgas trnkvkfdvv enqpmskvvv pvkahgtrsl apvpeitstd
     1141 nnsgvhadhk sdesklnslm hstasslgkv sqnlkkssff
//
LOCUS       XP_040942998            1122 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14F isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040942998
VERSION     XP_040942998.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087064.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1122
                     /product="kinesin-like protein KIN-14F isoform X1"
                     /calculated_mol_wt=124858
     Region          49..164
                     /region_name="CH_AtKIN14-like"
                     /note="calponin homology (CH) domain found in Arabidopsis
                     thaliana Kinesin-like KIN-14 protein family; cd21203"
                     /db_xref="CDD:409052"
     Site            order(49,53,122,124..125,128..129,131,138..146,152,
                     154..155,157..158,161..162)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409052"
     Region          426..758
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(436..437,512..519,624..625,662..667)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276817"
     CDS             1..1122
                     /gene="LOC107922069"
                     /coded_by="XM_041087064.1:179..3547"
                     /db_xref="GeneID:107922069"
ORIGIN      
        1 mpqettspsr nprglkalps nnvenplsed tfnvyydfaq rkaeeaasrr yqatewlrem
       61 dqgaskslpk epseeefcla lrnglilcnv lnkvnpgaip kivenpvipv qstegaaqsa
      121 iqyfenmrnf lvsvkdmqll tfeasdvekg gsmnkvvdci lclkgyyewk kaggigvwry
      181 ggtvkitalp kgsppslvgs esaddsldgs essqyeqlle flhlsnevai eesktanala
      241 flfdrfglwl lqaylresne ieefplnamv idtliskivk dfsallvsqg tqlglflkki
      301 lktdfnslsk sdfmeaisly lgqrtslasn dffkfcicgg krevihqtvn hstayaqlih
      361 lhqrelkeik ldfqetklgv kqihsnwaeq lrrlehhikg levasssyhk vleenrmlyn
      421 qvqdlkgtir vycrvrpflq gqtngqstvd yigengnimi vnplkqgkda rkvfsfnkvf
      481 gqnvsqeqiy idtqplirsv ldgfnvcifa ygqtgsgkty tmsgpdmtte qtwgvnyral
      541 rdlfqisker sdfiryevgv qmieiyneqv rdllvmdgsn rrldirnnsq lnglnvpdas
      601 wvpvsstqdv lefmrigqtn ravgatalne rssrshsvlt ihvygkelvs gsilkgclhl
      661 vdlagservd kseavgerlk eaqhinrsls algdvisala qksahipyrn skltqvlqds
      721 lggqaktlmf vhispevnai getistlkfa ervasielga arsnketgei qelkeeisnl
      781 klalekkeae veqlkvgnvr smtesqrgra vspfqiprhg tsssikpgdd nrsseatsrs
      841 assgkqrrsr fpsafavadk emlpkmpspa eerlasalka rspsppvrrs sstdrgasnr
      901 srtkvesvdn qpisrvpfpa rvpvnksfat ttvtpssdat ssgvhssfqe ttkqenisda
      961 lynlrklsik kvhseledeq frqalnvrqg girknkaesk akikhqlpat lektdvamtl
     1021 lsemddgekm eqppksdfse peteqslvgs pmyaalkmkk lghnlsryph nfeqrglvqp
     1081 qavvplqggk tdrspkegsn tnlmpefrrs rstprgkflv lp
//
LOCUS       XP_040942999            1114 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14F isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040942999
VERSION     XP_040942999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087065.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1114
                     /product="kinesin-like protein KIN-14F isoform X2"
                     /calculated_mol_wt=123786
     Region          49..164
                     /region_name="CH_AtKIN14-like"
                     /note="calponin homology (CH) domain found in Arabidopsis
                     thaliana Kinesin-like KIN-14 protein family; cd21203"
                     /db_xref="CDD:409052"
     Site            order(49,53,122,124..125,128..129,131,138..146,152,
                     154..155,157..158,161..162)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409052"
     Region          426..758
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(436..437,512..519,624..625,662..667)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     CDS             1..1114
                     /gene="LOC107922069"
                     /coded_by="XM_041087065.1:179..3523"
                     /db_xref="GeneID:107922069"
ORIGIN      
        1 mpqettspsr nprglkalps nnvenplsed tfnvyydfaq rkaeeaasrr yqatewlrem
       61 dqgaskslpk epseeefcla lrnglilcnv lnkvnpgaip kivenpvipv qstegaaqsa
      121 iqyfenmrnf lvsvkdmqll tfeasdvekg gsmnkvvdci lclkgyyewk kaggigvwry
      181 ggtvkitalp kgsppslvgs esaddsldgs essqyeqlle flhlsnevai eesktanala
      241 flfdrfglwl lqaylresne ieefplnamv idtliskivk dfsallvsqg tqlglflkki
      301 lktdfnslsk sdfmeaisly lgqrtslasn dffkfcicgg krevihqtvn hstayaqlih
      361 lhqrelkeik ldfqetklgv kqihsnwaeq lrrlehhikg levasssyhk vleenrmlyn
      421 qvqdlkgtir vycrvrpflq gqtngqstvd yigengnimi vnplkqgkda rkvfsfnkvf
      481 gqnvsqeqiy idtqplirsv ldgfnvcifa ygqtgsgkty tmsgpdmtte qtwgvnyral
      541 rdlfqisker sdfiryevgv qmieiyneqv rdllvmdgsn rrldirnnsq lnglnvpdas
      601 wvpvsstqdv lefmrigqtn ravgatalne rssrshsvlt ihvygkelvs gsilkgclhl
      661 vdlagservd kseavgerlk eaqhinrsls algdvisala qksahipyrn skltqvlqds
      721 lggqaktlmf vhispevnai getistlkfa ervasielga arsnketgei qelkeeisnl
      781 klalekkeae veqlkvgnvr smtesqrgra vspfqiprhg tsssikpgdd nrsseatsrs
      841 assgkqrrsr fpsafavadk emlpkmpspa eerlasalka rspsppvrrs sstdrgasnr
      901 srtkvesvdn qpisrvpfpa rvpvnksfat ttvtpssdat ssgvhssfqe ttkqenisda
      961 lynlrklsik kvhseledeq frqalnvrqg girknkaesk akikhqlpat lektdvamtl
     1021 lsemddgekm eqppksdfse peteqslvgs pmyaalkmkk lghnlsrglv qpqavvplqg
     1081 gktdrspkeg sntnlmpefr rsrstprgkf lvlp
//
LOCUS       XP_040943000            1063 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14F isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943000
VERSION     XP_040943000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087066.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1063
                     /product="kinesin-like protein KIN-14F isoform X3"
                     /calculated_mol_wt=118015
     Region          8..105
                     /region_name="CH_AtKIN14-like"
                     /note="calponin homology (CH) domain found in Arabidopsis
                     thaliana Kinesin-like KIN-14 protein family; cd21203"
                     /db_xref="CDD:409052"
     Site            order(63,65..66,69..70,72,79..87,93,95..96,98..99,
                     102..103)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409052"
     Region          367..699
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(377..378,453..460,565..566,603..608)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     CDS             1..1063
                     /gene="LOC107922069"
                     /coded_by="XM_041087066.1:184..3375"
                     /db_xref="GeneID:107922069"
ORIGIN      
        1 mdqgaskslp kepseeefcl alrnglilcn vlnkvnpgai pkivenpvip vqstegaaqs
       61 aiqyfenmrn flvsvkdmql ltfeasdvek ggsmnkvvdc ilclkgyyew kkaggigvwr
      121 yggtvkital pkgsppslvg sesaddsldg sessqyeqll eflhlsneva ieesktanal
      181 aflfdrfglw llqaylresn eieefplnam vidtliskiv kdfsallvsq gtqlglflkk
      241 ilktdfnsls ksdfmeaisl ylgqrtslas ndffkfcicg gkrevihqtv nhstayaqli
      301 hlhqrelkei kldfqetklg vkqihsnwae qlrrlehhik glevasssyh kvleenrmly
      361 nqvqdlkgti rvycrvrpfl qgqtngqstv dyigengnim ivnplkqgkd arkvfsfnkv
      421 fgqnvsqeqi yidtqplirs vldgfnvcif aygqtgsgkt ytmsgpdmtt eqtwgvnyra
      481 lrdlfqiske rsdfiryevg vqmieiyneq vrdllvmdgs nrrldirnns qlnglnvpda
      541 swvpvsstqd vlefmrigqt nravgataln erssrshsvl tihvygkelv sgsilkgclh
      601 lvdlagserv dkseavgerl keaqhinrsl salgdvisal aqksahipyr nskltqvlqd
      661 slggqaktlm fvhispevna igetistlkf aervasielg aarsnketge iqelkeeisn
      721 lklalekkea eveqlkvgnv rsmtesqrgr avspfqiprh gtsssikpgd dnrsseatsr
      781 sassgkqrrs rfpsafavad kemlpkmpsp aeerlasalk arspsppvrr ssstdrgasn
      841 rsrtkvesvd nqpisrvpfp arvpvnksfa tttvtpssda tssgvhssfq ettkqenisd
      901 alynlrklsi kkvhselede qfrqalnvrq ggirknkaes kakikhqlpa tlektdvamt
      961 llsemddgek meqppksdfs epeteqslvg spmyaalkmk klghnlsryp hnfeqrglvq
     1021 pqavvplqgg ktdrspkegs ntnlmpefrr srstprgkfl vlp
//
LOCUS       XP_040943001             485 aa            linear   PLN 06-AUG-2024
DEFINITION  uridine kinase-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943001
VERSION     XP_040943001.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087067.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..485
                     /product="uridine kinase-like protein 3"
                     /calculated_mol_wt=54248
     Region          49..247
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(61,184,232)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(82,104,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(85,101,130,132,135,193)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     Region          265..466
                     /region_name="UPRTase"
                     /note="Uracil phosphoribosyltransferase; pfam14681"
                     /db_xref="CDD:434124"
     Site            order(335,337,387..389,391..395,421)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..485
                     /gene="LOC121213850"
                     /coded_by="XM_041087067.1:105..1562"
                     /db_xref="GeneID:121213850"
ORIGIN      
        1 mgsnsvedmi eassgvhfsg fhmdgleskn iekpttspga envhkqpfii gvaggaasgk
       61 ttvcdmiiqq lhdqrvvlvn qdsfyhnlte eelarvheyn fdhpdafdte klldsienlr
      121 hdravdipny dfksyksnaf parrvnpsdv iilegilifh dprvrelmnm kifvdtdadv
      181 rlarrirrdt vdkgrdigav ldqyskfvkp afddfilptk kyadiiiprg gdnhvaidli
      241 vqhirtklgq hdlckiypnl yviqstfqmr gmhtlirdsl ttkhdfvfys drlirlvveh
      301 glghlpftek qvitptgsvy tgvdfckrlc gvsvirsges menalracck gikigkilih
      361 regdngqqli yeklpqdise rhvllldpil gtgnsavqai sllikkgvpe sniiflnlis
      421 apqgvhvvck sfptlkivts eieiglnedf rvvpgmgefg dryfgtdddd nlqavapmql
      481 snqsr
//
LOCUS       XP_040943002             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943002
VERSION     XP_040943002.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087068.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087068.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_040943003             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943003
VERSION     XP_040943003.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087069.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087069.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_040943004             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943004
VERSION     XP_040943004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087070.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087070.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_040943005             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943005
VERSION     XP_040943005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087071.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087071.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_040943006             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943006
VERSION     XP_040943006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087072.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087072.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_040943007             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943007
VERSION     XP_040943007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087073.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087073.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_040943008             767 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CLMP1 [Gossypium hirsutum].
ACCESSION   XP_040943008
VERSION     XP_040943008.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087074.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="protein CLMP1"
                     /calculated_mol_wt=84486
     Region          28..>186
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          48..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(49..50,53..54,56,84,87..88,91..92,94..95,120,
                     123..124,127..128,131)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          82..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..146
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          285..377
                     /region_name="PB1"
                     /note="PB1 domain; pfam00564"
                     /db_xref="CDD:395447"
     Site            order(289,317)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(330,343)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..767
                     /gene="LOC107922038"
                     /coded_by="XM_041087074.1:407..2710"
                     /db_xref="GeneID:107922038"
ORIGIN      
        1 mgksggrkkk ggsnqvsvdn hsnnsaaaht nggvdldssi flkrahelke egnkkfqnkd
       61 yvaalqhydd alrlipktht dravfhsnra aclmqmkpid ydtviaectm glqvqprfvr
      121 allrrarafe aikkyemamq dvqlllgadp nhkdaleiar rlrtalgprq eaqqdlqsrp
      181 spaalgasav rgapiaglgp clparpvskk ttsppggsvg spsnklekiq mnvatengpe
      241 nraqmprlvl kpssgslktt gnlnkggpra qsisgfvqeq vaiewrplkl vydhdirlsq
      301 mpvncsfkvl reivskrfps sksvlikykd ndgdlvtitc ttelrlaess vdtlipiepe
      361 adkasglgml rlhivevnpe qepplpdeee ekpletegak adesgshssl gdngsegvdt
      421 eiektekeas kekagatedp eckevemddw lfefaqlfrt hvgidpdahi dlhelgmelc
      481 sealeetvts deaqilfdka aakfqevaal affnwgnvhm caarkripld esaskevmsa
      541 qlqvaydwvr ekyslareky seallikpdf yegllalgqq qfemaklnws falakkidls
      601 swdpaetfql fgsaeekmka atemweklee qranelkdpn sikkddllkr rkkpgsvaes
      661 ellgtgnqge lspeeaaeqa avmrsqihlf wgnmlfersq vecklgmdgw krnldtaver
      721 fklagasesd istvlknhcs ngdavegdek kvggdaessd vnqtsdk
//
LOCUS       XP_016707351             340 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g55760 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707351
VERSION     XP_016707351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851862.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="BTB/POZ domain-containing protein At1g55760
                     isoform X1"
                     /calculated_mol_wt=38551
     Region          165..273
                     /region_name="BTB"
                     /note="BTB/POZ domain; pfam00651"
                     /db_xref="CDD:395526"
     Region          274..>303
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     CDS             1..340
                     /gene="LOC107922036"
                     /coded_by="XM_016851862.2:165..1187"
                     /db_xref="GeneID:107922036"
ORIGIN      
        1 mtesayrvet tarlaqwrid nlasctyrks dpfkignwnw hlsmeknrvl yvklypeisn
       61 ltrdnppias fiirvvcsag drkafthpgt scllqnrtit kikdkqlksn edfvwpievp
      121 ltgkfiidve fldlktaspn ggepcsiwae gltqkqsnat alaclgrmlt qsihtdiiin
      181 asngsigahr avlsarspvf hsmfshnlqe kelstinisd msieacqall cyiygnikhe
      241 eflahrlall raadnydisd lkeachesll edidtknvle rlqnaalyql pklksscmry
      301 lvrfgkiydi rddfnaflqc adrelitdif hevlntwkgf
//
LOCUS       XP_016707352             328 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g55760 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707352
VERSION     XP_016707352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..328
                     /product="BTB/POZ domain-containing protein At1g55760
                     isoform X2"
                     /calculated_mol_wt=37264
     Region          153..261
                     /region_name="BTB"
                     /note="BTB/POZ domain; pfam00651"
                     /db_xref="CDD:395526"
     Region          262..>291
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     CDS             1..328
                     /gene="LOC107922036"
                     /coded_by="XM_016851863.2:165..1151"
                     /db_xref="GeneID:107922036"
ORIGIN      
        1 mtesayrvet tarlaqwrid nlasctyrks dpfkignwnw hlsmeknrvl yvklypeisn
       61 ltrdnppias fiirvvcsag drkafthpei kdkqlksned fvwpievplt gkfiidvefl
      121 dlktaspngg epcsiwaegl tqkqsnatal aclgrmltqs ihtdiiinas ngsigahrav
      181 lsarspvfhs mfshnlqeke lstinisdms ieacqallcy iygnikheef lahrlallra
      241 adnydisdlk eacheslled idtknvlerl qnaalyqlpk lksscmrylv rfgkiydird
      301 dfnaflqcad relitdifhe vlntwkgf
//
LOCUS       XP_040943010             444 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar cation/proton exchanger 5 [Gossypium hirsutum].
ACCESSION   XP_040943010
VERSION     XP_040943010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087076.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..444
                     /product="vacuolar cation/proton exchanger 5"
                     /calculated_mol_wt=48300
     Region          74..437
                     /region_name="Na_Ca_ex"
                     /note="Sodium/calcium exchanger protein; cl46895"
                     /db_xref="CDD:481235"
     CDS             1..444
                     /gene="LOC107921716"
                     /coded_by="XM_041087076.1:475..1809"
                     /db_xref="GeneID:107921716"
ORIGIN      
        1 mmdyklqilr vksnfeemes adetgihvvd diddpeirev daqqrriqaf svglegagdr
       61 ktigtviyks iytvilskkf nllipfgpla ifvqkktnqn gwvfilgllg implaerlgy
      121 tteqlafysg ptlggllnat fgnateliis iyalrtgrir vvqlsllgsl lsnllfvlgi
      181 affsggivrk eqvfnkatav vdsglllmav mgllfpaslh stgtevhlgv selalsrvss
      241 cvlllayvas iifqlknikh legnqhgeil ysddqdqdqd eegeaapeis kwesviwlgi
      301 taaaisilsg ylvdaiegts lawgvpvafi svillpiggn taavttsvmf amkdkldvsl
      361 gvaigsstqi smfiipfcvv vgwifgrpld lnfqlfetat lfmtvlfvaf mmqegtsnyf
      421 kglmllfcyv lvaasyfvhe dpss
//
LOCUS       XP_016707160             216 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML21 [Gossypium hirsutum].
ACCESSION   XP_016707160
VERSION     XP_016707160.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851671.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..216
                     /product="probable calcium-binding protein CML21"
                     /calculated_mol_wt=24525
     Region          38..199
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..216
                     /gene="LOC107921829"
                     /coded_by="XM_016851671.2:301..951"
                     /db_xref="GeneID:107921829"
ORIGIN      
        1 maetkleakm veamqrrasv gtamksfnsv ilkfpkides lrnckavfeq fdedsngaid
       61 neelkkcfnk lqisfteeee isdlfkacdf nqnmgikfne fivllclvyl lkdnapgheg
      121 ksrmgmpnle atfetfvdaf vfldknkdgf vsknemvqai nesgerssgr iamkrfeemd
      181 wdkngsvsfk eflfaftnwv giddaedded eeegtv
//
LOCUS       XP_016707325             995 aa            linear   PLN 06-AUG-2024
DEFINITION  translation initiation factor IF-2, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707325
VERSION     XP_016707325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851836.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..995
                     /product="translation initiation factor IF-2,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=106369
     Region          382..433
                     /region_name="IF2_N"
                     /note="Translation initiation factor IF-2, N-terminal
                     region; pfam04760"
                     /db_xref="CDD:428110"
     Region          463..977
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..995
                     /gene="LOC107922011"
                     /coded_by="XM_016851836.2:247..3234"
                     /db_xref="GeneID:107922011"
ORIGIN      
        1 mvivvgtmps sslaslvnlg tlnatfinyf sepisssyys cvrrvslskr sfsrkckcky
       61 svaptdfvae annsssykds daeivlkpap kpvlksegvk ndkglswnae lsegededke
      121 enernkvies lgevlekaek letsnvnvnv nvnkpkasgd gsgsgggkka ktlksvwrkg
      181 dtvgivqkvv kespkvndkk gegkvesqge saaaplrppq ppvrpqpklq akpavapppv
      241 vkkpvilkdv gagqklesdt dgkskerkpi lidkfaskkp vvdpviaqav laptkpgkgp
      301 apgkfkddyr kknvsaggpr rriisddlei pdeetselnv sipgaatsrk grkwskarrk
      361 aariqaakea apvkveilev gekgmsveev aynlaigege ilgylyskgi kpdgvqtldk
      421 dmvkmvckey evevidadpv kveqmakkke ifdeddldkl qdrppvltim ghvdhgkttl
      481 ldvirkskva aseaggitqg igaykvlvpi dgkpqpcvfl dtpgheafga mrargarvtd
      541 iviivvaadd girpqtneai ahakaagvpi viainkidkd ganpervmqe lssvglmpev
      601 wggdipmvqi salkgqnidd lletvmlvae lqelkanpdr nakgtiieag lhkskgsvat
      661 fivqngtlkr gdvvvcgeaf gkvralfddg gnrvdeagps ipvqviglnn vplagdefev
      721 vdsldvarek aeacaellrn ermsakagdg kvtlsslasa vsagklsgld lhqlniilkv
      781 dlqgsieavr qallvlpqdn vtlkflleat gdvstsdvdl avaskaiilg fnvktpgpvk
      841 syaenkgvei rlyrviyeli ddvrnamegl lepveeqvpi gsaevravfs sgsgrvagcm
      901 vtegkivdgc girvirngrt vhvgvldslr rvkeivkeff gqvnaglecg mgvedydqwq
      961 egdileafnm vqkkrtleea sasmaaaleg vgvel
//
LOCUS       XP_016707326             991 aa            linear   PLN 06-AUG-2024
DEFINITION  translation initiation factor IF-2, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707326
VERSION     XP_016707326.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851837.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..991
                     /product="translation initiation factor IF-2,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=105890
     Region          382..433
                     /region_name="IF2_N"
                     /note="Translation initiation factor IF-2, N-terminal
                     region; pfam04760"
                     /db_xref="CDD:428110"
     Region          463..973
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..991
                     /gene="LOC107922011"
                     /coded_by="XM_016851837.2:247..3222"
                     /db_xref="GeneID:107922011"
ORIGIN      
        1 mvivvgtmps sslaslvnlg tlnatfinyf sepisssyys cvrrvslskr sfsrkckcky
       61 svaptdfvae annsssykds daeivlkpap kpvlksegvk ndkglswnae lsegededke
      121 enernkvies lgevlekaek letsnvnvnv nvnkpkasgd gsgsgggkka ktlksvwrkg
      181 dtvgivqkvv kespkvndkk gegkvesqge saaaplrppq ppvrpqpklq akpavapppv
      241 vkkpvilkdv gagqklesdt dgkskerkpi lidkfaskkp vvdpviaqav laptkpgkgp
      301 apgkfkddyr kknvsaggpr rriisddlei pdeetselnv sipgaatsrk grkwskarrk
      361 aariqaakea apvkveilev gekgmsveev aynlaigege ilgylyskgi kpdgvqtldk
      421 dmvkmvckey evevidadpv kveqmakkke ifdeddldkl qdrppvltim ghvdhgkttl
      481 ldvirkskva aseaggitqg igaykvlvpi dgkpqpcvfl dtpgheafga mrargarvtd
      541 iviivvaadd girpqtneai ahakaagvpi viainkidkd ganpervmqe lssvglmpev
      601 wggdipmvqi salkgqnidd lletvmlvae lqelkanpdr nakgtiieag lhkskgsvat
      661 fivqngtlkr gdvvvcgeaf gkvralfddg gnrvdeagps ipvqviglnn vplagdefev
      721 vdsldvarek aeacaellrn ermsakagdg kvtlsslasa vsagklsgld lhqlniilkv
      781 dlqgsieavr qallvlpqdn vtlkflleat gdvstsdvdl avaskaiilg fnvktpgpvk
      841 syaenkgvei rlyrviyeli ddvrnamegl lepveeqvpi gsaevravfs sgsgrvagcm
      901 vtegkivdgc girvirngrt vhvgvldslr rvkeivkevn aglecgmgve dydqwqegdi
      961 leafnmvqkk rtleeasasm aaalegvgve l
//
LOCUS       XP_016701827             175 aa            linear   PLN 06-AUG-2024
DEFINITION  LOB domain-containing protein 4 [Gossypium hirsutum].
ACCESSION   XP_016701827
VERSION     XP_016701827.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701827.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..175
                     /product="LOB domain-containing protein 4"
                     /calculated_mol_wt=19239
     Region          13..111
                     /region_name="LOB"
                     /note="Lateral organ boundaries (LOB) domain; pfam03195"
                     /db_xref="CDD:460843"
     CDS             1..175
                     /gene="LOC107916961"
                     /coded_by="XM_016846338.2:292..819"
                     /db_xref="GeneID:107916961"
ORIGIN      
        1 mkengrkhga lspcaackll rrrcapdcvf apyfpadepq kfasvhkvfg asnvnkmlqe
       61 lpehqrrdav ssmvyeanar vrdpvygcvg aisslqrqid slqnqlalaq aevvqmrmrq
      121 fgstssnpgt nsadeniasv adapskfmps hhqsksffcv dmvdqpnmae slwsy
//
LOCUS       XP_040943012             154 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943012
VERSION     XP_040943012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087078.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..154
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16904
     CDS             1..154
                     /gene="LOC121213851"
                     /coded_by="XM_041087078.1:174..638"
                     /db_xref="GeneID:121213851"
ORIGIN      
        1 mrsnscrfkc wsswlqrksq grvaanislq mlisrcilli qnhgqvliyv avgsvvseqe
       61 hisiilvgls veyesvreva lttnvsldll igmlvdcgar qlefgsnipv qanmvyqqkn
      121 dvesqsknss snagyvgsea lsvvyfvckl vifk
//
LOCUS       XP_040943013             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943013
VERSION     XP_040943013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087079.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15213
     CDS             1..138
                     /gene="LOC121213851"
                     /coded_by="XM_041087079.1:171..587"
                     /db_xref="GeneID:121213851"
ORIGIN      
        1 mrsnscrfkc wsswlqrksq grvaanislq mlisrcilli qnhgqvliyv aglsveyesv
       61 revalttnvs ldlligmlvd cgarqlefgs nipvqanmvy qqkndvesqs knsssnagyv
      121 gsealsvvyf vcklvifk
//
LOCUS       XP_016702437             244 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein CONSTANS [Gossypium hirsutum].
ACCESSION   XP_016702437
VERSION     XP_016702437.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846948.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702437.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..244
                     /product="zinc finger protein CONSTANS"
                     /calculated_mol_wt=27929
     Region          147..190
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     CDS             1..244
                     /gene="LOC107917643"
                     /coded_by="XM_016846948.2:84..818"
                     /db_xref="GeneID:107917643"
ORIGIN      
        1 masipqfysd ysfsndfsqf qnpllipqqn cidaaiptsv tcgeeisfpm ffdnggldvf
       61 qqqpnltssv ptallpdnns vvacgidgry rlrdvcddfg decnavhqdf kpvepamtqi
      121 sgiqgklmlp lmednnqkvv rysveerkdr ilrylkkrnq rnfnkkikya crksladrrv
      181 rvrgrfarnn telceqemvm rkedgnspid knlnycdavq tkhdedewlq eamanliylp
      241 yvas
//
LOCUS       XP_016708178             315 aa            linear   PLN 06-AUG-2024
DEFINITION  sperm-associated antigen 1 [Gossypium hirsutum].
ACCESSION   XP_016708178
VERSION     XP_016708178.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852689.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="sperm-associated antigen 1"
                     /calculated_mol_wt=35637
     Site            order(9..10,13..14,16,43,46..47,50..51,53..54,77,80..81,
                     84..85,88)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          9..33
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          11..>115
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          41..71
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          76..104
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..315
                     /gene="LOC107922588"
                     /coded_by="XM_016852689.2:334..1281"
                     /db_xref="GeneID:107922588"
ORIGIN      
        1 matasfnkie rahqmyregr ynealgyyte alavaktkpq kialhsnraa cylklhhfkk
       61 aaeectsvle ldhkhtgalm lraqtlvtlk eynsalfdvn qlieldpsse vyhnlqarlr
      121 tqvalapipe seaeleeeee eheqpdtsek evrqddnked lvvpaigkdl naaelneypi
      181 kekiipseks evkeyaelet dcnnmpernp gvtalqkpne kdskgyqaip kpkeysgqkn
      241 vpqrvgvadp fgegikdskg wqaipkpkgh saldyarwdr vendsseddd dddddedsqp
      301 qyrfrvrtvg irsvk
//
LOCUS       XP_016707155             157 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ATL44 [Gossypium hirsutum].
ACCESSION   XP_016707155
VERSION     XP_016707155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851666.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="probable E3 ubiquitin-protein ligase ATL44"
                     /calculated_mol_wt=18011
     Region          <78..128
                     /region_name="COG5540"
                     /note="RING-finger-containing ubiquitin ligase
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:227827"
     CDS             1..157
                     /gene="LOC107921825"
                     /coded_by="XM_016851666.2:197..670"
                     /db_xref="GeneID:107921825"
ORIGIN      
        1 mfassyssls fhhstmaidq lgkylvslls mvsvvkwawn lllrfclfpc apiggedfkl
       61 gwqnysckqd agddeaevec aiclckidkd deipelrcdh lfhkvcmdrw vgcrrstcpl
      121 crtsltaprq lvsgmevllf kycclddsrh retwwlr
//
LOCUS       XP_016733702             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016733702
VERSION     XP_016733702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18309
     Region          81..127
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(82,85,100,102,105,108,120,123)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..158
                     /gene="LOC107944376"
                     /coded_by="XM_016878213.2:133..609"
                     /db_xref="GeneID:107944376"
ORIGIN      
        1 mfasstlsfh hsimgvdkle kcyfsllsml ssvqwawnll lrfslfpyqi papigrddfk
       61 lgcrnysckq daggdeeeev ecsiclckid eddeipelrc dhlfhkvcld rwaehrrstc
      121 picrtsltpr qlvsgvevih fkycslddtg hretwwlr
//
LOCUS       XP_040943014             157 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL78 [Gossypium hirsutum].
ACCESSION   XP_040943014
VERSION     XP_040943014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087080.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="RING-H2 finger protein ATL78"
                     /calculated_mol_wt=18143
     Region          <79..128
                     /region_name="COG5540"
                     /note="RING-finger-containing ubiquitin ligase
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:227827"
     CDS             1..157
                     /gene="LOC121213854"
                     /coded_by="XM_041087080.1:125..598"
                     /db_xref="GeneID:121213854"
ORIGIN      
        1 mfasstvafd hsilaidkie kcyssllsiv tvvqwswnil lrfslfpyqi ptpiggddfk
       61 lgnrnhcskr dvgdddeeve caiclckide ddeipelrcd hlfhkvcldr wvghrrttcp
      121 vcrrsltprq lasgmevilf kycsfddtsh retwwlr
//
LOCUS       XP_016706553             202 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706553
VERSION     XP_016706553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23134
     CDS             1..202
                     /gene="LOC107921185"
                     /coded_by="XM_016851064.2:135..743"
                     /db_xref="GeneID:107921185"
ORIGIN      
        1 madqssnpsi ilpkpphplh qiaetpthrl llkqwlkeee lilnrisfke tqidsvrkei
       61 tqlyiffflf hsisllllfn sssrdsplga chrswipslc sllcsmgiiw avryktdveg
      121 hlekllerek edgkllgkcv eelkkkgvef dllkevdalr rakslrveak avrkwsardf
      181 vtlffftvsc lvlgltrvil cs
//
LOCUS       XP_016707218             160 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RHA2B [Gossypium hirsutum].
ACCESSION   XP_016707218
VERSION     XP_016707218.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707218.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="E3 ubiquitin-protein ligase RHA2B"
                     /calculated_mol_wt=18313
     Region          79..125
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(82,85,100,102,105,108,120,123)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438483"
     CDS             1..160
                     /gene="LOC107921924"
                     /coded_by="XM_016851729.2:12..494"
                     /db_xref="GeneID:107921924"
ORIGIN      
        1 mtqyycslle aisspllhhs hstistmaid nklgnyifsl vsivsavkwa wsillryclf
       61 pypipadigy dykqdwgsdv ecaiclckid eddeipelrc dhlfhkacld rwvgsrrftc
      121 picrtctltp pqlasgmqvi vfsycsfdds sshretwwlr
//
LOCUS       XP_016707938             436 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ROOT PRIMORDIUM DEFECTIVE 1 [Gossypium hirsutum].
ACCESSION   XP_016707938
VERSION     XP_016707938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852449.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..436
                     /product="protein ROOT PRIMORDIUM DEFECTIVE 1"
                     /calculated_mol_wt=50991
     Region          40..370
                     /region_name="PORR"
                     /note="Plant organelle RNA recognition domain; pfam11955"
                     /db_xref="CDD:432218"
     CDS             1..436
                     /gene="LOC107922417"
                     /coded_by="XM_016852449.2:258..1568"
                     /db_xref="GeneID:107922417"
ORIGIN      
        1 miflksvrcn gilfgpinsf sqrrwkktif saqtrletrt kdlkldklmm hinklktiln
       61 ihqlmaqrkr gpfvsvqlms rwrnivglnv gmgeflhkyp hvfelfvhpl rrnlcckitq
      121 rmrdlideee kivkeyepel lqkvkkllmm skngtlhvha lrlirrelgl pedfrdsilr
      181 thskdfrlvd leivelvdrn eslakaevek wrekeyvdkw lsefetsyaf pinfptgfki
      241 eggyreklkn wqrlpylkpn eskevlrvrt cggierfekr avgiihells ltvekmlevd
      301 rlahfrkdfa ievnvcelll khpgifyict kgstqtvflr eayskgclal pnpiyvvrrk
      361 mldlillghr ntrsledlee ikeerngsvf rtnvggrrdg dwivpildsy dqnafgslgd
      421 indskqpfdg cesgrn
//
LOCUS       XP_016707939             436 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ROOT PRIMORDIUM DEFECTIVE 1 [Gossypium hirsutum].
ACCESSION   XP_016707939
VERSION     XP_016707939.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852450.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..436
                     /product="protein ROOT PRIMORDIUM DEFECTIVE 1"
                     /calculated_mol_wt=50991
     Region          40..370
                     /region_name="PORR"
                     /note="Plant organelle RNA recognition domain; pfam11955"
                     /db_xref="CDD:432218"
     CDS             1..436
                     /gene="LOC107922417"
                     /coded_by="XM_016852450.2:608..1918"
                     /db_xref="GeneID:107922417"
ORIGIN      
        1 miflksvrcn gilfgpinsf sqrrwkktif saqtrletrt kdlkldklmm hinklktiln
       61 ihqlmaqrkr gpfvsvqlms rwrnivglnv gmgeflhkyp hvfelfvhpl rrnlcckitq
      121 rmrdlideee kivkeyepel lqkvkkllmm skngtlhvha lrlirrelgl pedfrdsilr
      181 thskdfrlvd leivelvdrn eslakaevek wrekeyvdkw lsefetsyaf pinfptgfki
      241 eggyreklkn wqrlpylkpn eskevlrvrt cggierfekr avgiihells ltvekmlevd
      301 rlahfrkdfa ievnvcelll khpgifyict kgstqtvflr eayskgclal pnpiyvvrrk
      361 mldlillghr ntrsledlee ikeerngsvf rtnvggrrdg dwivpildsy dqnafgslgd
      421 indskqpfdg cesgrn
//
LOCUS       XP_040943015            1033 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g56140 [Gossypium hirsutum].
ACCESSION   XP_040943015
VERSION     XP_040943015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087081.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1033
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g56140"
                     /calculated_mol_wt=113351
     Region          117..964
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..343
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          344..365
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          366..385
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          390..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          703..964
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(703..707,711,723,725,754,770..773,777,779,820,822,
                     824..825,827,838,841,858..861)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(703..707,711,723,725,754,770..773,777,820,822,
                     824..825,827,838)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(707,777,779,820,822,824,841,858..861)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(837..844,854..861)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1033
                     /gene="LOC107921196"
                     /coded_by="XM_041087081.1:126..3227"
                     /db_xref="GeneID:107921196"
ORIGIN      
        1 mkmwklfrse qvlglslcal cvlvlpfaae aqnqsqpttd paevralnsi fedwgitarq
       61 dqwnttgdpc sgaaldsdst didnvaynpf ikcdcsfsng stchitrlkv yalnvvgvip
      121 delwtltflt nlrlgqnylt gplsasignl trmqwldigi nalsgelpke iglltdlqsf
      181 afgtnnfsgp lpselgncsm lqqlyfdssg vsgeipstfa nlqnletvwa sdteltgrip
      241 dfignwsklt vlrfqgnsfe gpipstfanl tsltelrisg lsngsslafi kdmkslgvld
      301 lrnnnisgti pssmgeyqsl tqldlsfnni tgqipdslfn lsslthlflg nnklngtlpa
      361 ekssslrnid vsynnlagnf pswisepnll inlvannfti gesnssvlps glnclqrnfp
      421 cnrgsgiyfn fsinsggqqi tssdsilfer dnetlgpasy yvtntnrwav snvgyftasn
      481 npqyiitsgs qftntldsel fqtarisass lryyglglen gnytvrlefa etqivetnrw
      541 eglgrrvfdi yiqgsrvled fdirreaggv srravtrqft avvsenylev hlfwagkgtc
      601 cvpaqgtygp sisaisatpd fiptvsnnap tgeesrtgli vgivvgvgvv cllsiaaffi
      661 frrrrrvpmk ddeeflgida rpytfsyael kaatedfspa nklgeggfgp vykgrlddgr
      721 aiavkqlsav srqgksqfvt eiatisavqh rnlvklygcc ieaeqrllvy eylenksldq
      781 ilfgksldln wstrydiclg varglaylhe esrvrivhrd vkssnillds dltpkisdfg
      841 laklyddkkt histrvagti gylapeyamr ghltektdvf afgvvcleiv sgrpnadsgl
      901 eeqqmyllew awhlheadre velvdsnlse fdeeevkrvi giallctqts plqrpsmsrv
      961 vamlsgdtdv srevskpgyl tdwkvddtss fisneatras dtsygstsia tgaenspvnl
     1021 tkpmlhsiig egr
//
LOCUS       XP_016708149             950 aa            linear   PLN 06-AUG-2024
DEFINITION  GPI ethanolamine phosphate transferase 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016708149
VERSION     XP_016708149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852660.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..950
                     /product="GPI ethanolamine phosphate transferase 3 isoform
                     X1"
                     /calculated_mol_wt=105901
     Region          62..357
                     /region_name="GPI_EPT_3"
                     /note="GPI ethanolamine phosphate transferase 3, PIG-O;
                     cd16023"
                     /db_xref="CDD:293747"
     Site            order(74,124,228,279..280)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293747"
     Site            order(74,124,228,280)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293747"
     CDS             1..950
                     /gene="LOC107922570"
                     /coded_by="XM_016852660.2:240..3092"
                     /db_xref="GeneID:107922570"
ORIGIN      
        1 mwgwwrfgkw tvlimflhii ailiftkgfl ltrtelphss hcsdlsqspc hsspsssscw
       61 tkpavdrlii ivldalrfdf vapssffeek qpwmdklkvl qrmasenpss akifkaiadp
      121 pttslqrlkg lttgalptfi dvgnsfgapa ivednfinql iqngkrvvmm gddtwtqlfp
      181 nhfnksypyp sfnvkdlntv dngciehllp slyqqdwdvl iahflgvdha ghihgvdstp
      241 miekleqyna vlekvikelq nqsgpgklhe nslllvmgdh gqtlngdhgg gspeevetsi
      301 famsfkdlps lpsefdsssc epskniciss ipqldfavtv ssllgvpfpf gsigrvnpel
      361 yalavctwnl dddktwnnqd qtkleewlqn yanvlcinsw qvkryidvys assvigfsse
      421 dlfrisdlys kadenwsytk nlssykngss ntslpvlkrq ivaysnflsy vaelarskwt
      481 efnlkmmgtg igimllslyc htlaikklnk sygvsllssr dsgisfglml tffmvlirag
      541 sllsnsyilk egkaanflla ttgimtlrys fmknkmliea aifllltfif riaievglyk
      601 qaatsqfmss ssswmlgisi sqslwtymae impilalivl gyflyksiss ccwgipkyvi
      661 mgtilcyflv alhwisesni ldlahflkgf gknciprtvy aitlvqlsll aivpmfckee
      721 tsncrgslfv kmmsilsacs stiiilqgkq galvalgsll agycmmrlqg ieqhtvsgta
      781 gisildplpv lqwsllavcl lfasghwcaf dglrygaafv gfdefilipq ailltidtfg
      841 fshilsvfgl plfvafppsf nqtehkslfp iklfwifmvy glitaitaaa tilcvtiqrr
      901 hlmvwglfap kfvfdvvgli ltdllifvas iyyfngledr ignaelrrlw
//
LOCUS       XP_040943016             922 aa            linear   PLN 06-AUG-2024
DEFINITION  GPI ethanolamine phosphate transferase 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943016
VERSION     XP_040943016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087082.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..922
                     /product="GPI ethanolamine phosphate transferase 3 isoform
                     X2"
                     /calculated_mol_wt=102798
     Region          62..357
                     /region_name="GPI_EPT_3"
                     /note="GPI ethanolamine phosphate transferase 3, PIG-O;
                     cd16023"
                     /db_xref="CDD:293747"
     Site            order(74,124,228,279..280)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293747"
     Site            order(74,124,228,280)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293747"
     CDS             1..922
                     /gene="LOC107922570"
                     /coded_by="XM_041087082.1:240..3008"
                     /db_xref="GeneID:107922570"
ORIGIN      
        1 mwgwwrfgkw tvlimflhii ailiftkgfl ltrtelphss hcsdlsqspc hsspsssscw
       61 tkpavdrlii ivldalrfdf vapssffeek qpwmdklkvl qrmasenpss akifkaiadp
      121 pttslqrlkg lttgalptfi dvgnsfgapa ivednfinql iqngkrvvmm gddtwtqlfp
      181 nhfnksypyp sfnvkdlntv dngciehllp slyqqdwdvl iahflgvdha ghihgvdstp
      241 miekleqyna vlekvikelq nqsgpgklhe nslllvmgdh gqtlngdhgg gspeevetsi
      301 famsfkdlps lpsefdsssc epskniciss ipqldfavtv ssllgvpfpf gsigrvnpel
      361 yalavctwnl dddktwnnqd qtkleewlqn yanvlcinsw qvkryidvys assvigfsse
      421 dlfrisdlys kadenwsytk nlssykngss ntslpvlkrq ivaysnflsy vaelarskwt
      481 efnlkmmgtg igimllslyc htlaikklnk sygvsllssr dsgisfglml tffmvlirag
      541 sllsnsyilk egkaanflla ttgimtlrys fmknkmliea aifllltfif riaievglyk
      601 qaatsqfmss ssswmlgisi sqslwtymae impilalivl gyflyksiss ccwgipkyvi
      661 mgtilcyflv alhwisesni ldlahflkgf gknciprtvy aitlvqlsll aivpmfckee
      721 tsncrgslfv kmmsilsacs stiiilqgkq galvalgsll agycmmrlqg ieqhtvsgta
      781 gisildplpv lqwsllavcl lfasghwcaf dglrygaafv gfdefilipq ailltidtfg
      841 fshilsvfgl plfvafppsf nqtehkslfp iklfwvwglf apkfvfdvvg liltdllifv
      901 asiyyfngle drignaelrr lw
//
LOCUS       XP_040943017             141 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR71 [Gossypium hirsutum].
ACCESSION   XP_040943017
VERSION     XP_040943017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087083.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..141
                     /product="auxin-responsive protein SAUR71"
                     /calculated_mol_wt=15963
     Region          1..114
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..141
                     /gene="LOC121203027"
                     /coded_by="XM_041087083.1:166..591"
                     /db_xref="GeneID:121203027"
ORIGIN      
        1 mkqlirrlsr vadassqysl lrsdtastrh ritrraesfr iavaslkkpa rrsvpeghvp
       61 vyvgeemerf lvnaellnhp vfvsllnksa qeygydqkgv lhipchvlvf ervmealrlg
      121 adlrglqdll rsfsddcfld l
//
LOCUS       XP_040943018             243 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943018
VERSION     XP_040943018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087084.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26069
     CDS             1..243
                     /gene="LOC121213856"
                     /coded_by="XM_041087084.1:299..1030"
                     /db_xref="GeneID:121213856"
ORIGIN      
        1 maadvsslhr vlsrykddlm vgnesggakp talitrdllg gggggaggas pfinmktdqs
       61 eelnldlqvp ngwekrldlk sgkvylqrcn sssssqssdg skhqinqtvp klqdlnfpas
      121 sskpllnlfd dtnlelklvs sptptnyqsv ctldkvkfal eraekepikk rspsysssss
      181 sikdsqnseg dqdklfaspv aagcpgclsy vlimkhnpkc prcntlvpmp vakkpridln
      241 isi
//
LOCUS       XP_016706798             352 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB63 [Gossypium hirsutum].
ACCESSION   XP_016706798
VERSION     XP_016706798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="transcription factor MYB63"
                     /calculated_mol_wt=39865
     Region          4..>118
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..352
                     /gene="LOC107921461"
                     /coded_by="XM_016851309.2:104..1162"
                     /db_xref="GeneID:107921461"
ORIGIN      
        1 mgkgrapccd kdkvkrgpws pqedlrlitf iqkhghenwr alpkqagllr cgkscrlrwi
       61 nylrpdvkrg nfskeeeeti irlhetlgnk wskiashlpg rtdneiknvw nthlkkrlap
      121 kngkipqnde sketcmvsss cssitfvssp cgkrnlevel eqqwhegsps kkpregfpvs
      181 dkaedyktev pshnsgpfee pkefpsssis ssnsnitnss qvnvpnpenh gdsllnfigv
      241 cdwknntsee vnkpeilnta fdiplesdsd fwnmldslgs fqpdeiqsne vegnqspdfg
      301 eeyskenenn kwlqyleiel glevtknenh nnlsntaaep lvpemydmll kp
//
LOCUS       XP_016707047             133 aa            linear   PLN 06-AUG-2024
DEFINITION  valerianol synthase TPS1B [Gossypium hirsutum].
ACCESSION   XP_016707047
VERSION     XP_016707047.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851558.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707047.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="valerianol synthase TPS1B"
                     /calculated_mol_wt=15522
     Region          <1..130
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            31..39
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
     CDS             1..133
                     /gene="LOC107921739"
                     /coded_by="XM_016851558.2:119..520"
                     /db_xref="GeneID:107921739"
ORIGIN      
        1 mgkmaaieaf iwlrkepksm kaldvigrlm ndivshkfeq lrhhcpssve cymnqhglsk
       61 kltlkdfeki ledawkdlne ecmrqtdgpr dlllrilnfs rvtylfykhg hgytkpeyvk
      121 ddvralfldp ipv
//
LOCUS       XP_040943019             103 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943019
VERSION     XP_040943019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087085.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..103
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11454
     Region          15..84
                     /region_name="DDA1"
                     /note="Det1 complexing ubiquitin ligase; pfam10172"
                     /db_xref="CDD:401980"
     CDS             1..103
                     /gene="LOC107922491"
                     /coded_by="XM_041087085.1:279..590"
                     /db_xref="GeneID:107922491"
ORIGIN      
        1 metenqnpfq ldvinllafn pfhnfpslpt srlyvrgtil gyksfaggmr vyicehntsp
       61 pesqhiktdq qnilirslml nnnkggsssk dvkaaaegpr krh
//
LOCUS       XP_016708046             103 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708046
VERSION     XP_016708046.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852557.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..103
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11454
     Region          15..84
                     /region_name="DDA1"
                     /note="Det1 complexing ubiquitin ligase; pfam10172"
                     /db_xref="CDD:401980"
     CDS             1..103
                     /gene="LOC107922491"
                     /coded_by="XM_016852557.2:78..389"
                     /db_xref="GeneID:107922491"
ORIGIN      
        1 metenqnpfq ldvinllafn pfhnfpslpt srlyvrgtil gyksfaggmr vyicehntsp
       61 pesqhiktdq qnilirslml nnnkggsssk dvkaaaegpr krh
//
LOCUS       XP_016708165             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708165
VERSION     XP_016708165.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852676.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_016852676.2:809..1213"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943020             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943020
VERSION     XP_040943020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087086.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087086.1:871..1275"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943021             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943021
VERSION     XP_040943021.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087087.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087087.1:714..1118"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943022             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943022
VERSION     XP_040943022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087088.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087088.1:691..1095"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943023             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943023
VERSION     XP_040943023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087089.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087089.1:708..1112"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943024             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943024
VERSION     XP_040943024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087090.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087090.1:753..1157"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943025             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943025
VERSION     XP_040943025.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087091.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087091.1:814..1218"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943026             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943026
VERSION     XP_040943026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087092.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087092.1:808..1212"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943027             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943027
VERSION     XP_040943027.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087093.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087093.1:794..1198"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_040943028             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943028
VERSION     XP_040943028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087094.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_041087094.1:862..1266"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_016708163             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708163
VERSION     XP_016708163.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852674.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14758
     Region          <79..127
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..134
                     /gene="LOC107922582"
                     /coded_by="XM_016852674.2:979..1383"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse ledlylilmq
       61 hattwviqvk klqqqlqket dlhlalasav ehcgspssss pgklpdkaqe lldsiavlei
      121 tvaklqqalh qgpc
//
LOCUS       XP_016708166             118 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708166
VERSION     XP_016708166.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852677.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..118
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12831
     Region          50..111
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..118
                     /gene="LOC107922582"
                     /coded_by="XM_016852677.2:1981..2337"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse levkklqqql
       61 qketdlhlal asavehcgsp sssspgklpd kaqelldsia vleitvaklq qalhqgpc
//
LOCUS       XP_040943029             118 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943029
VERSION     XP_040943029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087095.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..118
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12831
     Region          50..111
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..118
                     /gene="LOC107922582"
                     /coded_by="XM_041087095.1:706..1062"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mqwkcfvgls kefspirgrs sinrylqwks gkvwsksfsa gddscnscse levkklqqql
       61 qketdlhlal asavehcgsp sssspgklpd kaqelldsia vleitvaklq qalhqgpc
//
LOCUS       XP_016708170              75 aa            linear   PLN 06-AUG-2024
DEFINITION  golgin candidate 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016708170
VERSION     XP_016708170.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852681.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..75
                     /product="golgin candidate 1 isoform X3"
                     /calculated_mol_wt=8803
     CDS             1..75
                     /gene="LOC107922582"
                     /coded_by="XM_016852681.2:640..867"
                     /db_xref="GeneID:107922582"
ORIGIN      
        1 mearfrrgqk kspeeanqml qmqawqeeve rarqgqrdae skpssleaev qkmrvemaam
       61 krdaehysrq gkkfy
//
LOCUS       XP_040943030              89 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
            beta isoform isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943030
VERSION     XP_040943030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087096.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..89
                     /product="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform isoform X1"
                     /calculated_mol_wt=9851
     Region          20..>68
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     CDS             1..89
                     /gene="LOC107921370"
                     /coded_by="XM_041087096.1:194..463"
                     /db_xref="GeneID:107921370"
ORIGIN      
        1 mnnggaeaav apvggpqple wkfsqvfger tageeihdvn iisaiefnrt gdhlatrdrg
       61 grvvlfertd tqdilvhrqa fmlypfiwl
//
LOCUS       XP_040943031              75 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
            beta isoform isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943031
VERSION     XP_040943031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087097.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..75
                     /product="serine/threonine protein phosphatase 2A 55 kDa
                     regulatory subunit B beta isoform isoform X2"
                     /calculated_mol_wt=8022
     Region          20..>68
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     CDS             1..75
                     /gene="LOC107921370"
                     /coded_by="XM_041087097.1:194..421"
                     /db_xref="GeneID:107921370"
ORIGIN      
        1 mnnggaeaav apvggpqple wkfsqvfger tageeihdvn iisaiefnrt gdhlatrdrg
       61 grvvlfertd tqdvt
//
LOCUS       XP_016707290             816 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707290
VERSION     XP_016707290.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851801.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..816
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=92814
     Region          506..588
                     /region_name="LCCL"
                     /note="LCCL domain; cl02694"
                     /db_xref="CDD:445888"
     CDS             1..816
                     /gene="LOC107921994"
                     /coded_by="XM_016851801.2:260..2710"
                     /db_xref="GeneID:107921994"
ORIGIN      
        1 msgapkrshe eggaqsssap kyphedtany pkmpsssvpt eyhhpapydm gqdarmprip
       61 rtelrdsgrr splqhsiyrm pssialndsh mdshqgcses rmelreakdn revrvesreq
      121 rveprefyae aakreyqsgk gekdgrfesr gdeskelkhd renysgpkgd lkvekdlygg
      181 asihsswkdp rdylrgkrys eppggnidpw hiqransqgt vevvkegpat eerdyaeghe
      241 avgenkfdsk gddrfkdkdr krrdgkhrdw gdrdkersdr rnnthvgnss gevkesaree
      301 reaerwerer kdlkekerpk erekdhikre plngaekegl nnekelgdgs vriqeqenqa
      361 seqkkqkeld swknvdrear drrrerdgdt egdrpekrsk csdkesddgc adgegatere
      421 kegfnsgvqq rkrmlrprgs pqvasrepsf rprpqdnegs qgkpevstvv ykvgecmqel
      481 iklweeyeas qadkngessq ngptleiqip aehvtatnrq vrggqlwgtd iytddsdlva
      541 vlmhtgycrp tasppppaiq elratirvlp pqdcytsklr nnvrsrawga giscsyrver
      601 ccivkkgggt idlepclths stveptlapv avertittra aasnalrqqr fvrevtiqyn
      661 lcnepwikys isivadkglk kplytsarlk kgevlyleth scryelcftg ekmvkatvas
      721 qaheadteks qnhhshssng ekndsentli dvfrwsrckk plsqkvmrsi giplplehve
      781 vlvenvdwed vqwsqtgvwi agkeytlarv hflspn
//
LOCUS       XP_016707291             780 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707291
VERSION     XP_016707291.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851802.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..780
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=88996
     Region          470..552
                     /region_name="LCCL"
                     /note="LCCL domain; cl02694"
                     /db_xref="CDD:445888"
     CDS             1..780
                     /gene="LOC107921994"
                     /coded_by="XM_016851802.2:285..2627"
                     /db_xref="GeneID:107921994"
ORIGIN      
        1 mkkvvlnlll ppntlmrill iilkclrlly plstiilplm twgkmleclg flepsfviqg
       61 csesrmelre akdnrevrve sreqrvepre fyaeaakrey qsgkgekdgr fesrgdeske
      121 lkhdrenysg pkgdlkvekd lyggasihss wkdprdylrg kryseppggn idpwhiqran
      181 sqgtvevvke gpateerdya egheavgenk fdskgddrfk dkdrkrrdgk hrdwgdrdke
      241 rsdrrnnthv gnssgevkes areereaerw ererkdlkek erpkerekdh ikreplngae
      301 keglnnekel gdgsvriqeq enqaseqkkq keldswknvd reardrrrer dgdtegdrpe
      361 krskcsdkes ddgcadgega terekegfns gvqqrkrmlr prgspqvasr epsfrprpqd
      421 negsqgkpev stvvykvgec mqeliklwee yeasqadkng essqngptle iqipaehvta
      481 tnrqvrggql wgtdiytdds dlvavlmhtg ycrptasppp paiqelrati rvlppqdcyt
      541 sklrnnvrsr awgagiscsy rverccivkk gggtidlepc lthsstvept lapvaverti
      601 ttraaasnal rqqrfvrevt iqynlcnepw ikysisivad kglkkplyts arlkkgevly
      661 lethscryel cftgekmvka tvasqahead teksqnhhsh ssngekndse ntlidvfrws
      721 rckkplsqkv mrsigiplpl ehvevlvenv dwedvqwsqt gvwiagkeyt larvhflspn
//
LOCUS       XP_040943032             260 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH53 [Gossypium hirsutum].
ACCESSION   XP_040943032
VERSION     XP_040943032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087098.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..260
                     /product="transcription factor bHLH53"
                     /calculated_mol_wt=29267
     Region          141..199
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(145..146,148,153,170..171)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381460"
     Site            order(151..152,155..156,158..159,163,171..172,175..176,
                     179,181..182,185..186)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381460"
     CDS             1..260
                     /gene="LOC107921740"
                     /coded_by="XM_041087098.1:6..788"
                     /db_xref="GeneID:107921740"
ORIGIN      
        1 mvlssyfdcq tdvpmyeikt veaesetqla apdglecywn afelpytfpa syldpqnyts
       61 llplysippe vipyetlssy pcpkrhklie dhycsdlmpg vfdgvavspc plledhqinl
      121 egmktvgncn kiseekcvsv qsiaarerrr kitkktqelg klvpggskmn taemlqsafk
      181 yikylqaqvg tlqvmdsfpe nekrswdgkm emvtspkvqe klymedkclv akdavlsltt
      241 lfkpplshel trllslpsnd
//
LOCUS       XP_016707423             401 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate kinase, cytosolic [Gossypium hirsutum].
ACCESSION   XP_016707423
VERSION     XP_016707423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="phosphoglycerate kinase, cytosolic"
                     /calculated_mol_wt=42175
     Region          1..401
                     /region_name="PLN02282"
                     /note="phosphoglycerate kinase"
                     /db_xref="CDD:165923"
     Site            order(25,27,41,64,122)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238195"
     Site            order(187..190,376..378)
                     /site_type="other"
                     /note="hinge regions"
                     /db_xref="CDD:238195"
     Site            order(225,297,321,323,325..328,358..360)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238195"
     Site            359
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238195"
     CDS             1..401
                     /gene="LOC107922096"
                     /coded_by="XM_016851934.2:209..1414"
                     /db_xref="GeneID:107922096"
ORIGIN      
        1 matkksvgdl keadlkgkkv fvrvdlnvpl ddnfnitddt riraavptik ylmghgskvi
       61 lsshlgrpkg vtpkyslkpl vprlsellgv evkmandcig eevekmvaal pdggvlllen
      121 vrfykeeekn dpefakklas ladlyvndaf gtahrahast egvakylkps vagflmqkel
      181 dylvgavanp kkpfaaivgg skvstkigvi esllakvdil ilgggmmftf ykaqgyavgs
      241 slveedkldl atsllekaka kgvslllptd vvvadkfaad anskvvpasg ipdgwmgldi
      301 gpdsiktfse sldttqtiiw ngpmgvfefe kfaagteava kklaelsgkg vttiigggds
      361 vaavekagla dkmshistgg gaslellegk qlpgvlalnd a
//
LOCUS       XP_016707424             401 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate kinase, cytosolic [Gossypium hirsutum].
ACCESSION   XP_016707424
VERSION     XP_016707424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="phosphoglycerate kinase, cytosolic"
                     /calculated_mol_wt=42175
     Region          1..401
                     /region_name="PLN02282"
                     /note="phosphoglycerate kinase"
                     /db_xref="CDD:165923"
     Site            order(25,27,41,64,122)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238195"
     Site            order(187..190,376..378)
                     /site_type="other"
                     /note="hinge regions"
                     /db_xref="CDD:238195"
     Site            order(225,297,321,323,325..328,358..360)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238195"
     Site            359
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238195"
     CDS             1..401
                     /gene="LOC107922096"
                     /coded_by="XM_016851935.2:178..1383"
                     /db_xref="GeneID:107922096"
ORIGIN      
        1 matkksvgdl keadlkgkkv fvrvdlnvpl ddnfnitddt riraavptik ylmghgskvi
       61 lsshlgrpkg vtpkyslkpl vprlsellgv evkmandcig eevekmvaal pdggvlllen
      121 vrfykeeekn dpefakklas ladlyvndaf gtahrahast egvakylkps vagflmqkel
      181 dylvgavanp kkpfaaivgg skvstkigvi esllakvdil ilgggmmftf ykaqgyavgs
      241 slveedkldl atsllekaka kgvslllptd vvvadkfaad anskvvpasg ipdgwmgldi
      301 gpdsiktfse sldttqtiiw ngpmgvfefe kfaagteava kklaelsgkg vttiigggds
      361 vaavekagla dkmshistgg gaslellegk qlpgvlalnd a
//
LOCUS       XP_016707564             488 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoglycerate kinase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707564
VERSION     XP_016707564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..488
                     /product="phosphoglycerate kinase, chloroplastic"
                     /calculated_mol_wt=50802
     Region          1..488
                     /region_name="PLN03034"
                     /note="phosphoglycerate kinase; Provisional"
                     /db_xref="CDD:178602"
     Site            order(107,109,123,146,204)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238195"
     Site            order(269..272,458..460)
                     /site_type="other"
                     /note="hinge regions"
                     /db_xref="CDD:238195"
     Site            order(307,379,403,405,407..410,440..442)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238195"
     Site            441
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238195"
     CDS             1..488
                     /gene="LOC107922181"
                     /coded_by="XM_016852075.2:382..1848"
                     /db_xref="GeneID:107922181"
ORIGIN      
        1 masattsttl sllkttastt sssasrssas lirlpstrrh lkssplihsl gfssaasgds
       61 llslhvsskv rsfkgkgsrg vvsmakksvg dltaadlkgk kvfvradlnv plddsqnitd
      121 dtriraaipt ikhliqngak vilsshlgrp kgvtpkfsla plvprlsell giqvvkaddc
      181 igpeveklva alpeggvlll envrfykeee knepefakkl asladlfvnd afgtahraha
      241 stegvtkflk psvagfllqk eldylvgavs spkrpfaaiv ggskvsskig viesllekcd
      301 illlgggmif tfykaqglsv gsslveedkl elatsllvka kakgvslllp tdvviadkfa
      361 pdanskivpa saipdgwmgl digpdsvktf nealdttqti iwngpmgvfe fdkfavgtea
      421 iakklaelsg kgvttiiggg dsvaavekvg vadvmshist gggaslelle gkelpgvial
      481 deavpvav
//
LOCUS       XP_016707214             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707214
VERSION     XP_016707214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851725.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13952
     CDS             1..123
                     /gene="LOC107921917"
                     /coded_by="XM_016851725.2:161..532"
                     /db_xref="GeneID:107921917"
ORIGIN      
        1 mlgtalnlhs pflfseefev rekieptmgg krqmepkvge mehrvkkrkl dlkeemekik
       61 lwsrvlaemt avqrqlievv isnsnmedlh lkceqlggvn teaallnsmi qnyihvmlgv
      121 fgg
//
LOCUS       XP_040943033             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943033
VERSION     XP_040943033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087099.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..135
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16157
     CDS             1..135
                     /gene="LOC121213859"
                     /coded_by="XM_041087099.1:276..683"
                     /db_xref="GeneID:121213859"
ORIGIN      
        1 mktmqcsmft irkkrhhyhp lpfpkpkllw kchqqkrkkq erlssrmkri rsdmkeisee
       61 qkeikegqrq erenfeaiql eceelknqti liaqqtastq irlalmlqil karenlefdk
      121 avmltnalre viark
//
LOCUS       XP_040943034             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943034
VERSION     XP_040943034.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087100.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=16029
     CDS             1..134
                     /gene="LOC121213859"
                     /coded_by="XM_041087100.1:238..642"
                     /db_xref="GeneID:121213859"
ORIGIN      
        1 mktmqcsmft irkkrhhyhp lpfpkpkllw kchqkrkkqe rlssrmkrir sdmkeiseeq
       61 keikegqrqe renfeaiqle ceelknqtil iaqqtastqi rlalmlqilk arenlefdka
      121 vmltnalrev iark
//
LOCUS       XP_016706645             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706645
VERSION     XP_016706645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..135
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16041
     CDS             1..135
                     /gene="LOC107921283"
                     /coded_by="XM_016851156.2:76..483"
                     /db_xref="GeneID:107921283"
ORIGIN      
        1 mqatrrnfkl avaarmqyrt sqrqnqqkrr lrtvnsrmkr lrvemkeita eqreikegqr
       61 qvrekfeaie lqceelrket mlmtqqsakt qirlalmfqi lkarqnqeld kaailthalr
      121 evvareeqel daskk
//
LOCUS       XP_016706646             134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706646
VERSION     XP_016706646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851157.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15913
     CDS             1..134
                     /gene="LOC107921283"
                     /coded_by="XM_016851157.2:76..480"
                     /db_xref="GeneID:107921283"
ORIGIN      
        1 mqatrrnfkl avaarmqyrt sqrqnqkrrl rtvnsrmkrl rvemkeitae qreikegqrq
       61 vrekfeaiel qceelrketm lmtqqsaktq irlalmfqil karqnqeldk aailthalre
      121 vvareeqeld askk
//
LOCUS       XP_016706717             484 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 73C6 [Gossypium hirsutum].
ACCESSION   XP_016706717
VERSION     XP_016706717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..484
                     /product="UDP-glycosyltransferase 73C6"
                     /calculated_mol_wt=53862
     Region          4..479
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(15..16,18,168,194..195,199,226,283,361,363,365..366,
                     369)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(15,283,361,363,365..366)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            16
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..484
                     /gene="LOC107921360"
                     /coded_by="XM_016851228.2:48..1502"
                     /db_xref="GeneID:107921360"
ORIGIN      
        1 mglphfvlfp smaqghlipm vdisrllaqr nvivtivttp hnasrvqkti draiesglai
       61 rlvqlrfpgk eaglpdgven mdmissmedl fkfftaansm deavqelfek ltprpiciis
      121 dfflhytlki atkfqvpris fhgiccfcyl cvhnlksski ldnitsdyec fkvpglaekv
      181 eftkpqlpln ldeswkdifd tttkadeasy gvvinsfeel espyvkeyrk itkawcigpv
      241 slshkneldk aergkkasin eqqclkwlds kepnsviyac lgsmstmksp elielglgle
      301 asnkpfiwil rgnndasnqv tkwieedgfe erikgrgfvv vgwapqvlil shpaiggflt
      361 hcgwnstieg isagvplltl plfadqftne rlvvqilktg vsvgadepta wgeeksgfkl
      421 tkehvknaid qlmnegnkgi drrkrakefg ekankavevg gssylnmtll iqdiiqqssk
      481 mgvv
//
LOCUS       XP_016706743             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706743
VERSION     XP_016706743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851254.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14099
     CDS             1..117
                     /gene="LOC107921400"
                     /coded_by="XM_016851254.2:262..615"
                     /db_xref="GeneID:107921400"
ORIGIN      
        1 mqwrtwqthh qqrkrlksvn rrmkrlrvem keisegqrei kvgqkkvrek feaielecee
       61 lrketilitq qtantqirla lmfqilkarq nqeldkatil thalrdlier gnqqrkl
//
LOCUS       XP_016706744             116 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706744
VERSION     XP_016706744.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851255.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..116
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=13971
     CDS             1..116
                     /gene="LOC107921400"
                     /coded_by="XM_016851255.2:183..533"
                     /db_xref="GeneID:107921400"
ORIGIN      
        1 mqwrtwqthh qrkrlksvnr rmkrlrvemk eisegqreik vgqkkvrekf eaieleceel
       61 rketilitqq tantqirlal mfqilkarqn qeldkatilt halrdlierg nqqrkl
//
LOCUS       XP_016707169             112 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707169
VERSION     XP_016707169.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851680.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12871
     CDS             1..112
                     /gene="LOC107921845"
                     /coded_by="XM_016851680.2:10..348"
                     /db_xref="GeneID:107921845"
ORIGIN      
        1 mlspivglmg rkrkiakrsr rrrlarlkae ieeireeqks inegqrqvrk rmeaigeecq
       61 qlsietnkvi rqtavtqirl aimfnilkar qdgdiakash lthllretmg ra
//
LOCUS       XP_040943035             397 aa            linear   PLN 06-AUG-2024
DEFINITION  metal tolerance protein 10 [Gossypium hirsutum].
ACCESSION   XP_040943035
VERSION     XP_040943035.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087101.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="metal tolerance protein 10"
                     /calculated_mol_wt=45730
     Region          108..384
                     /region_name="FieF"
                     /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump
                     [Inorganic ion transport and metabolism]; COG0053"
                     /db_xref="CDD:439823"
     CDS             1..397
                     /gene="LOC121213860"
                     /coded_by="XM_041087101.1:162..1355"
                     /db_xref="GeneID:121213860"
ORIGIN      
        1 mernesgihn vnddyntell pqrderssss wrlnldefrl pqqslssqdd pfsrllctpk
       61 kqrkvseyyk kqerllagfn emetmnemgc lpdsltedem kqlerserma vhasnaanlv
      121 lfgakvfasi eskslavias tldslldlls gfilwftaha mrtpnqyhyp igkkrmqpvg
      181 iivfasvmat lglqillesv reliakshpe inhmqekwmi gimvfvtvvk fvlmvycrqf
      241 kneivrayaq dhffdvvtns vglatavlai hfrwwidptg aiiialytms twartvienv
      301 wsligrsapp dflakltyli wnhheeiqhi dtvraytfgs hyfvevdivl pedmllnkah
      361 nigeklqekl eqlpeveraf vhidfefthr pehktmv
//
LOCUS       XP_040943036             566 aa            linear   PLN 06-AUG-2024
DEFINITION  coleoptile phototropism protein 1 [Gossypium hirsutum].
ACCESSION   XP_040943036
VERSION     XP_040943036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087102.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="coleoptile phototropism protein 1"
                     /calculated_mol_wt=63746
     Region          48..157
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          230..466
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..566
                     /gene="LOC121213861"
                     /coded_by="XM_041087102.1:32..1732"
                     /db_xref="GeneID:121213861"
ORIGIN      
        1 mrskmmgcre ehqsthgsvl ggkpnhcviy ppkssivage lerrnndwfv rtkvasdlmv
       61 qvgdfsfhlh klamvsksgy lnrlvfakrs eghghnggsl kivlddlpgg titfesivnf
      121 cygfkvdvta asiaplycaa nflemsddlh qgnlisktea flsfaifssw kdtfkvlksc
      181 esvspwskdl livkqcsdai awkastdpka ftlgqnsngn lnvgessdtw wfqdvstlri
      241 dhfiqviesi krkgvkpelv gsciahwtak wfsgttfvfd dptipkhltq klqritiesl
      301 inmlpaekns vscnfllylv klglkiqvns ellskletri asmleqccaq dllvknygdk
      361 dttydvgivi rvvkayvlla lknsrarlci vgrlidgylt liardinltl idfkllvdal
      421 ptnarscdnn lyraidmylk ahpslmeeer asvckameyh rlsedarqha mrngrlplki
      481 vtefmlleqv kmarsisask sninprtttq vimkmnnkkc lekgfiapqk eimlirkeve
      541 nmkmqlnqlq mcklklqkqv qrscik
//
LOCUS       XP_016708294             143 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S19-3 [Gossypium hirsutum].
ACCESSION   XP_016708294
VERSION     XP_016708294.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852805.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..143
                     /product="40S ribosomal protein S19-3"
                     /calculated_mol_wt=15797
     Region          6..142
                     /region_name="Ribosomal_S19e"
                     /note="Ribosomal protein S19e; pfam01090"
                     /db_xref="CDD:460058"
     CDS             1..143
                     /gene="LOC107922672"
                     /coded_by="XM_016852805.2:187..618"
                     /db_xref="GeneID:107922672"
ORIGIN      
        1 meaartvkdv sphdfvkaya ahlkrsgkie lpswtdivkt gklkelppyd pdwyyiraas
       61 markiylrgg lgvgafrriy ggakrngsrp rhfckssgsv arhilqqlqn vniididpkg
      121 grritsngqr dldqvagria vai
//
LOCUS       XP_016707427             778 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707427
VERSION     XP_016707427.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851938.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707427.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..778
                     /product="UPF0481 protein At3g47200 isoform X1"
                     /calculated_mol_wt=89300
     Region          186..552
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..778
                     /gene="LOC107922100"
                     /coded_by="XM_016851938.2:71..2407"
                     /db_xref="GeneID:107922100"
ORIGIN      
        1 mmditikkkl rsatfnvkks lqrsmmditi kekgglpgdv dnsykepdak iqirnkemkg
       61 qscwqataen pkkrrrlttw igsegsvean wdtnpklesk ekdvtdddgd lcystsssvs
      121 pcifktpfpg lqfqepqlas nwdtnpkles kekdvtdddg dlcystsssv spcifktpfp
      181 glqfqepqla sigpyhytnr nlpldkykys fldrfisrtg kdlrfyvqqm mslerhsrtc
      241 yshnfsmssp qfvemmlldg cfimevlhhf gvseqqpwvf piepwqlpil vqdllildnq
      301 ipffvlemlf eslesqegtp tpslctkalk ffdlafplsm diacplkphh lldlllqsir
      361 ssspsqmvap nfvysflkki strnqadtmr dqlelqppfy ltknamelqa sgielrstta
      421 arftninfnn ggleipsvti ndifiailnn fvafehcset sskdftayvs fmsklirhps
      481 daellcsngi isrfshneqk vvqsfhmlwm nildldvqhs ylskrlkele wyytqdgktr
      541 pwrrlvsryw ricffcitnl vlgfnrlrsg vnlmihfveq vkfngingef qgditcpqdh
      601 tsficdsvfr magfiyksar grvksidlsl rnskfmafff lnlviviiil mgheippppa
      661 psprqldekv dysreleeea deflrkfkki tleakdqyik vedpvaadke gievedstkr
      721 keksggdtsr vswsivdkne mivdcvsnee yyneawskil ehkvigklls alspvpwd
//
LOCUS       XP_016707428             765 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707428
VERSION     XP_016707428.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851939.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707428.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..765
                     /product="UPF0481 protein At3g47200 isoform X2"
                     /calculated_mol_wt=87710
     Region          173..539
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..765
                     /gene="LOC107922100"
                     /coded_by="XM_016851939.2:83..2380"
                     /db_xref="GeneID:107922100"
ORIGIN      
        1 mmditikkkl rsatfnvkks lqrsmmditi kekgglpgdv dnsykepdak iqataenpkk
       61 rrrlttwigs egsveanwdt npkleskekd vtdddgdlcy stsssvspci fktpfpglqf
      121 qepqlasnwd tnpkleskek dvtdddgdlc ystsssvspc ifktpfpglq fqepqlasig
      181 pyhytnrnlp ldkykysfld rfisrtgkdl rfyvqqmmsl erhsrtcysh nfsmsspqfv
      241 emmlldgcfi mevlhhfgvs eqqpwvfpie pwqlpilvqd llildnqipf fvlemlfesl
      301 esqegtptps lctkalkffd lafplsmdia cplkphhlld lllqsirsss psqmvapnfv
      361 ysflkkistr nqadtmrdql elqppfyltk namelqasgi elrsttaarf tninfnnggl
      421 eipsvtindi fiailnnfva fehcsetssk dftayvsfms klirhpsdae llcsngiisr
      481 fshneqkvvq sfhmlwmnil dldvqhsyls krlkelewyy tqdgktrpwr rlvsrywric
      541 ffcitnlvlg fnrlrsgvnl mihfveqvkf ngingefqgd itcpqdhtsf icdsvfrmag
      601 fiyksargrv ksidlslrns kfmaffflnl viviiilmgh eippppapsp rqldekvdys
      661 releeeadef lrkfkkitle akdqyikved pvaadkegie vedstkrkek sggdtsrvsw
      721 sivdknemiv dcvsneeyyn eawskilehk vigkllsals pvpwd
//
LOCUS       XP_016707431             727 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0481 protein At3g47200 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707431
VERSION     XP_016707431.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851942.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..727
                     /product="UPF0481 protein At3g47200 isoform X3"
                     /calculated_mol_wt=83650
     Region          135..501
                     /region_name="DUF247"
                     /note="Plant protein of unknown function; pfam03140"
                     /db_xref="CDD:460823"
     CDS             1..727
                     /gene="LOC107922100"
                     /coded_by="XM_016851942.2:72..2255"
                     /db_xref="GeneID:107922100"
ORIGIN      
        1 mmditikkkl rsatfnvkks lqrsmmditi kekgglpgdv dnsykepdak iqirnkemkg
       61 qscwqataen pkkrrrlttw igsegsvean wdtnpklesk ekdvtdddgd lcystsssvs
      121 pcifktpfpg lqfqepqlas igpyhytnrn lpldkykysf ldrfisrtgk dlrfyvqqmm
      181 slerhsrtcy shnfsmsspq fvemmlldgc fimevlhhfg vseqqpwvfp iepwqlpilv
      241 qdllildnqi pffvlemlfe slesqegtpt pslctkalkf fdlafplsmd iacplkphhl
      301 ldlllqsirs sspsqmvapn fvysflkkis trnqadtmrd qlelqppfyl tknamelqas
      361 gielrsttaa rftninfnng gleipsvtin difiailnnf vafehcsets skdftayvsf
      421 msklirhpsd aellcsngii srfshneqkv vqsfhmlwmn ildldvqhsy lskrlkelew
      481 yytqdgktrp wrrlvsrywr icffcitnlv lgfnrlrsgv nlmihfveqv kfngingefq
      541 gditcpqdht sficdsvfrm agfiyksarg rvksidlslr nskfmafffl nlviviiilm
      601 gheippppap sprqldekvd ysreleeead eflrkfkkit leakdqyikv edpvaadkeg
      661 ievedstkrk eksggdtsrv swsivdknem ivdcvsneey yneawskile hkvigkllsa
      721 lspvpwd
//
LOCUS       XP_016707144             497 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707144
VERSION     XP_016707144.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851655.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707144.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="uncharacterized protein"
                     /calculated_mol_wt=57351
     Region          35..200
                     /region_name="BMT5-like"
                     /note="rRNA (uridine-N3-)-methyltransferase BTM5-like;
                     pfam10354"
                     /db_xref="CDD:463056"
     CDS             1..497
                     /gene="LOC107921813"
                     /coded_by="XM_016851655.2:60..1553"
                     /db_xref="GeneID:107921813"
ORIGIN      
        1 mtmrglrklm lsaengesde eekrvshyss nhqillvgeg dfsfslslan afasasnica
       61 syldsydilv kkyknaisnl enleklgacl lhevdatkmk hhtdlanrkf driifnfpha
      121 gfhgkednph mirmhrnlvq gffrsakgml rangeihvnh ktnapfslwn lkklasgcsl
      181 aliqcldfnv edypgyhnkr gdgsrcdepf plgksstfkf gfcsrakkas katkrwgsmc
      241 nksqhfqtis mpmqlhstsd fnyhrrnhtv nriplrvklr piipnqnqys gvfdrnfngl
      301 vrtcqanslr sdfdarsddl gslrhgldrq lvevprtlng nlpymhehkh eheqvrhsld
      361 rqvvgvprti ndnlyymyeh eqarhsldrq kvevpralhg nlyymhehen sldrrmiemp
      421 rtlngnsyym hehkparhsv drqmvempra lngnlyymhe rehelahisn lrphlhgala
      481 cptsqlkvpn trdvlrl
//
LOCUS       XP_016706688             412 aa            linear   PLN 06-AUG-2024
DEFINITION  heavy metal-associated isoprenylated plant protein 41 [Gossypium
            hirsutum].
ACCESSION   XP_016706688
VERSION     XP_016706688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..412
                     /product="heavy metal-associated isoprenylated plant
                     protein 41"
                     /calculated_mol_wt=47062
     Region          35..200
                     /region_name="BMT5-like"
                     /note="rRNA (uridine-N3-)-methyltransferase BTM5-like;
                     pfam10354"
                     /db_xref="CDD:463056"
     CDS             1..412
                     /gene="LOC107921324"
                     /coded_by="XM_016851199.2:55..1293"
                     /db_xref="GeneID:107921324"
ORIGIN      
        1 mtmrglrklm lsaengesde eekrvshcss nhqillvgeg dfsfslslan afasasnica
       61 ssldsydilv kkyknaisnl enleklgacl lhevdatkmk hhtdlanrkf driifnfpha
      121 gfhgkednph mirmhrnlvq gffrsargml rangeihvnh ktnapfslwn lkklasgcfl
      181 aliqcvdfiv edypgyhnkr gngsrcdepf plgksstfkf gffprakkas katkrwgsmc
      241 nksqhfqtis mpmqlrstsd fnyhrrnhtv nriplrvklh pvipnqnqys gvfdrnfngl
      301 vqtcqanclr sdfdaryddl gslrhgldrq lvevprtlng nsyymhehkp arhsvdrqmv
      361 empgalngnl yymhehehel arisnsrphl hralacptyq lkvpntrdvl rl
//
LOCUS       XP_016707514             500 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-10 [Gossypium hirsutum].
ACCESSION   XP_016707514
VERSION     XP_016707514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852025.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="ataxin-10"
                     /calculated_mol_wt=55044
     Region          91..133
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          390..482
                     /region_name="Atx10homo_assoc"
                     /note="Spinocerebellar ataxia type 10 protein domain;
                     pfam09759"
                     /db_xref="CDD:462885"
     CDS             1..500
                     /gene="LOC107922151"
                     /coded_by="XM_016852025.2:381..1883"
                     /db_xref="GeneID:107922151"
ORIGIN      
        1 mvgeslpefn ypkdvlqpll stsnlsslqq aqeilikdsr aavgraelas knilptvlkl
       61 veslhrassq eylmqatkll rnlcagevan qnsfvehngi etvltvlrsa allsdpdfgi
      121 irlslqvlan vslagaehqq aiwlklfpne ffilasicsl etsdplcmil ytccdgkpgl
      181 aielcrdpgl pivagiiwtv asvgsredwf klllsrlcle dihfpalffk lcegnasedr
      241 gntalgdnvf sseqafllri iseilnerin evrvpnetal cvlgifkrsv sivdfgarak
      301 sglptgstsv dvmgysliil rdicaqdslg dlkkdsvdvv dlllsndltn vilsllhdle
      361 ppaiirktlk dsengelnlg stklcpykgf rrdlvaiign cayrrknvqd eirqksgill
      421 llqqrvtndd npylrewgiw slrnllegna enqqivadlq lqgsvdmpel arlglkvevd
      481 qnthraklvn ipgsytkpve
//
LOCUS       XP_016707515             500 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-10 [Gossypium hirsutum].
ACCESSION   XP_016707515
VERSION     XP_016707515.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852026.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="ataxin-10"
                     /calculated_mol_wt=55044
     Region          91..133
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          390..482
                     /region_name="Atx10homo_assoc"
                     /note="Spinocerebellar ataxia type 10 protein domain;
                     pfam09759"
                     /db_xref="CDD:462885"
     CDS             1..500
                     /gene="LOC107922151"
                     /coded_by="XM_016852026.2:382..1884"
                     /db_xref="GeneID:107922151"
ORIGIN      
        1 mvgeslpefn ypkdvlqpll stsnlsslqq aqeilikdsr aavgraelas knilptvlkl
       61 veslhrassq eylmqatkll rnlcagevan qnsfvehngi etvltvlrsa allsdpdfgi
      121 irlslqvlan vslagaehqq aiwlklfpne ffilasicsl etsdplcmil ytccdgkpgl
      181 aielcrdpgl pivagiiwtv asvgsredwf klllsrlcle dihfpalffk lcegnasedr
      241 gntalgdnvf sseqafllri iseilnerin evrvpnetal cvlgifkrsv sivdfgarak
      301 sglptgstsv dvmgysliil rdicaqdslg dlkkdsvdvv dlllsndltn vilsllhdle
      361 ppaiirktlk dsengelnlg stklcpykgf rrdlvaiign cayrrknvqd eirqksgill
      421 llqqrvtndd npylrewgiw slrnllegna enqqivadlq lqgsvdmpel arlglkvevd
      481 qnthraklvn ipgsytkpve
//
LOCUS       XP_016707516             500 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-10 [Gossypium hirsutum].
ACCESSION   XP_016707516
VERSION     XP_016707516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="ataxin-10"
                     /calculated_mol_wt=55044
     Region          91..133
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          390..482
                     /region_name="Atx10homo_assoc"
                     /note="Spinocerebellar ataxia type 10 protein domain;
                     pfam09759"
                     /db_xref="CDD:462885"
     CDS             1..500
                     /gene="LOC107922151"
                     /coded_by="XM_016852027.2:204..1706"
                     /db_xref="GeneID:107922151"
ORIGIN      
        1 mvgeslpefn ypkdvlqpll stsnlsslqq aqeilikdsr aavgraelas knilptvlkl
       61 veslhrassq eylmqatkll rnlcagevan qnsfvehngi etvltvlrsa allsdpdfgi
      121 irlslqvlan vslagaehqq aiwlklfpne ffilasicsl etsdplcmil ytccdgkpgl
      181 aielcrdpgl pivagiiwtv asvgsredwf klllsrlcle dihfpalffk lcegnasedr
      241 gntalgdnvf sseqafllri iseilnerin evrvpnetal cvlgifkrsv sivdfgarak
      301 sglptgstsv dvmgysliil rdicaqdslg dlkkdsvdvv dlllsndltn vilsllhdle
      361 ppaiirktlk dsengelnlg stklcpykgf rrdlvaiign cayrrknvqd eirqksgill
      421 llqqrvtndd npylrewgiw slrnllegna enqqivadlq lqgsvdmpel arlglkvevd
      481 qnthraklvn ipgsytkpve
//
LOCUS       XP_016707518             500 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-10 [Gossypium hirsutum].
ACCESSION   XP_016707518
VERSION     XP_016707518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="ataxin-10"
                     /calculated_mol_wt=55044
     Region          91..133
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          390..482
                     /region_name="Atx10homo_assoc"
                     /note="Spinocerebellar ataxia type 10 protein domain;
                     pfam09759"
                     /db_xref="CDD:462885"
     CDS             1..500
                     /gene="LOC107922151"
                     /coded_by="XM_016852029.2:431..1933"
                     /db_xref="GeneID:107922151"
ORIGIN      
        1 mvgeslpefn ypkdvlqpll stsnlsslqq aqeilikdsr aavgraelas knilptvlkl
       61 veslhrassq eylmqatkll rnlcagevan qnsfvehngi etvltvlrsa allsdpdfgi
      121 irlslqvlan vslagaehqq aiwlklfpne ffilasicsl etsdplcmil ytccdgkpgl
      181 aielcrdpgl pivagiiwtv asvgsredwf klllsrlcle dihfpalffk lcegnasedr
      241 gntalgdnvf sseqafllri iseilnerin evrvpnetal cvlgifkrsv sivdfgarak
      301 sglptgstsv dvmgysliil rdicaqdslg dlkkdsvdvv dlllsndltn vilsllhdle
      361 ppaiirktlk dsengelnlg stklcpykgf rrdlvaiign cayrrknvqd eirqksgill
      421 llqqrvtndd npylrewgiw slrnllegna enqqivadlq lqgsvdmpel arlglkvevd
      481 qnthraklvn ipgsytkpve
//
LOCUS       XP_016707520             172 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707520
VERSION     XP_016707520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18829
     Region          10..163
                     /region_name="Jagunal"
                     /note="ER re-organization during oogenesis; pfam07086"
                     /db_xref="CDD:462086"
     CDS             1..172
                     /gene="LOC107922153"
                     /coded_by="XM_016852031.2:596..1114"
                     /db_xref="GeneID:107922153"
ORIGIN      
        1 mqqrlsasgr psgtdgydfs yrmvvdsryq kvartksilr sfflvqaitl llglvllifq
       61 saseglasrv leisttacgi islkigelgr krsrvnmlrf fmvassiavs llmfcairkc
      121 sgfmaaksps fwetilelpe valavvglvf hlfiigytvh lianmsvpkr as
//
LOCUS       XP_016707521             172 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707521
VERSION     XP_016707521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852032.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18829
     Region          10..163
                     /region_name="Jagunal"
                     /note="ER re-organization during oogenesis; pfam07086"
                     /db_xref="CDD:462086"
     CDS             1..172
                     /gene="LOC107922153"
                     /coded_by="XM_016852032.2:193..711"
                     /db_xref="GeneID:107922153"
ORIGIN      
        1 mqqrlsasgr psgtdgydfs yrmvvdsryq kvartksilr sfflvqaitl llglvllifq
       61 saseglasrv leisttacgi islkigelgr krsrvnmlrf fmvassiavs llmfcairkc
      121 sgfmaaksps fwetilelpe valavvglvf hlfiigytvh lianmsvpkr as
//
LOCUS       XP_016707959             909 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: tetratricopeptide repeat protein 27 homolog
            [Gossypium hirsutum].
ACCESSION   XP_016707959
VERSION     XP_016707959.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852470.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707959.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..909
                     /product="LOW QUALITY PROTEIN: tetratricopeptide repeat
                     protein 27 homolog"
                     /calculated_mol_wt=101628
     Region          489..>573
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          492..516
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          519..546
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          545..739
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          580..608
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(581,584..585,588..589,591,615,618..619,622..623,
                     625..626,649,652..653,656..657,660)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          613..643
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          648..676
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          682..709
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..909
                     /gene="LOC107922433"
                     /coded_by="XM_016852470.2:53..2782"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107922433"
ORIGIN      
        1 mnmaereiei lrghelrllr ctlcqppsdp sshlqpsgfa asvpplhali sdfltsvesg
       61 nylgalssda arlvlaspds dlsshspdrv ysdlldrves finepsidda ekacrvvlvv
      121 cvavaalfwf iqcnltgpvn glpkrplpmk awweasemve weswarnqlm aagsdllgkf
      181 cylqyivfak mlllktrdll feasfmssfk irsiswwlfr allihqqild erssslfell
      241 qvfkgetlgh fgsfekvtsy wgaqlqdgea stivsmvhle agvleyiygr ldpcrldles
      301 aevaaglqls vtgilglrtv hqvepkaqmi lvantssksv sgdintsiap dtqltgpnvs
      361 easdiymtpk lvengngfgk necggvvstl ttvqqavvla qclliekssp hgemqgwdma
      421 pyieaidsqk ssyfilkcfc nilrirwest rsrtkqrale mmdnlvesih kpspgvplrl
      481 pxcfsvyipt ipalrkqygd ilvscglige alkifedlel wdnliycysk lekkaaavel
      541 ikeqlsrrpn dpklwcslgd ithsdacyek alevsnngsa rakrclayna ygrgeyeksk
      601 ilwesalaln slysngwfal gaaalkardv ekaldgftra vqldpengea wnniaclhmi
      661 kkkskesfia fkealkykrd swqmwenysq vafdvgnigq sleaikmvln mtnnkridve
      721 llekimqyle ertsarltav tndddlpsqt ssdsipcsvn psanaeknag rlrenehlle
      781 flgkilqqiv rsesrpelwg lyarwhrikg dltmcceall kqvrsyqgsn lwkdedrfks
      841 faqasldlce vymdissstn srrelhtaem hlkntlkqag tfsdteefrk leacldevki
      901 klqaeatas
//
LOCUS       XP_016708218             560 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP43 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016708218
VERSION     XP_016708218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..560
                     /product="peptidyl-prolyl cis-trans isomerase FKBP43
                     isoform X1"
                     /calculated_mol_wt=62266
     Region          3..92
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          454..559
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..560
                     /gene="LOC107922618"
                     /coded_by="XM_016852729.2:165..1847"
                     /db_xref="GeneID:107922618"
ORIGIN      
        1 mafwgtevkp gkpfthapln grlhlsqatl gmgdgikksi vqcnvgnkmp vflcclfpdk
       61 aeccqlnlef eesdevvfsv igprtvhltg yylsssslnh hndesesyge diagteters
      121 engeeseygg sfiddeepqv lsssqdfsav sesneemadl kiakgdkgrp krrlrkkyrn
      181 sgseneesss qkdftsgvaa mevleseted klpisslswg kctsksgkan veeksrketd
      241 npsdneiedn vtmlkgtnav rgvepecksg nrnggkqkhe lrvgnalvpk kkrgglakee
      301 glleadhcmi eevileqndq nkkltskkkc kydnlllass qvdtevgvkl krkrkeqfee
      361 ktlennvnke dethkigsny tvtkyvdved renqnqvndn hsrktkkkrr skdeegdamk
      421 veppvlpahe kkrsdvemga knandkeiql sngiiieele mgkpdgkias lgkkvrvhyt
      481 gklkesgqvf dssvgrahlk frlggkkvqe lwnvgldgmr iggkrrlivp psvsytnegt
      541 senippnswl vfdvelikvk
//
LOCUS       XP_040943037             518 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP53 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943037
VERSION     XP_040943037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087103.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="peptidyl-prolyl cis-trans isomerase FKBP53
                     isoform X2"
                     /calculated_mol_wt=58644
     Region          412..517
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..518
                     /gene="LOC107922618"
                     /coded_by="XM_041087103.1:296..1852"
                     /db_xref="GeneID:107922618"
ORIGIN      
        1 mweirclyfy avcflirlsv vnsiwnlrsl mksfflllal elfillvtic pllpliiimm
       61 nqnhmgrill gqkqkdprmv kkvnmvvvll mmknhksshl lkifllyqna sneemadlki
      121 akgdkgrpkr rlrkkyrnsg seneesssqk dftsgvaame vlesetedkl pisslswgkc
      181 tsksgkanve eksrketdnp sdneiednvt mlkgtnavrg vepecksgnr nggkqkhelr
      241 vgnalvpkkk rgglakeegl leadhcmiee vileqndqnk kltskkkcky dnlllassqv
      301 dtevgvklkr krkeqfeekt lennvnkede thkigsnytv tkyvdvedre nqnqvndnhs
      361 rktkkkrrsk deegdamkve ppvlpahekk rsdvemgakn andkeiqlsn giiieelemg
      421 kpdgkiaslg kkvrvhytgk lkesgqvfds svgrahlkfr lggkkvqelw nvgldgmrig
      481 gkrrlivpps vsytnegtse nippnswlvf dvelikvk
//
LOCUS       XP_016708219             497 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP43 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016708219
VERSION     XP_016708219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852730.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="peptidyl-prolyl cis-trans isomerase FKBP43
                     isoform X3"
                     /calculated_mol_wt=55382
     Region          3..91
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          391..496
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..497
                     /gene="LOC107922618"
                     /coded_by="XM_016852730.2:166..1659"
                     /db_xref="GeneID:107922618"
ORIGIN      
        1 mafwgtevkp gkpfthapln grlhlsqatl gmgdgikksi vqcnvgnkmp vflcclfpdk
       61 aeccqlnlef eesdevvfsv igprtvhlta neemadlkia kgdkgrpkrr lrkkyrnsgs
      121 eneesssqkd ftsgvaamev lesetedklp isslswgkct sksgkanvee ksrketdnps
      181 dneiednvtm lkgtnavrgv epecksgnrn ggkqkhelrv gnalvpkkkr gglakeegll
      241 eadhcmieev ileqndqnkk ltskkkckyd nlllassqvd tevgvklkrk rkeqfeektl
      301 ennvnkedet hkigsnytvt kyvdvedren qnqvndnhsr ktkkkrrskd eegdamkvep
      361 pvlpahekkr sdvemgakna ndkeiqlsng iiieelemgk pdgkiaslgk kvrvhytgkl
      421 kesgqvfdss vgrahlkfrl ggkkvqelwn vgldgmrigg krrlivppsv sytnegtsen
      481 ippnswlvfd velikvk
//
LOCUS       XP_016706481             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706481
VERSION     XP_016706481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850992.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=48908
     Region          73..>178
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Region          284..>400
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..421
                     /gene="LOC107921126"
                     /coded_by="XM_016850992.2:477..1742"
                     /db_xref="GeneID:107921126"
ORIGIN      
        1 msvsfkywde cadpedmeam wnhpevrtew tgagetegqr vhlsrdpdgq pyltqtemra
       61 vaeivtrrqf dkkldpemic aiaelesnrq plamgcdkkt nlitigimqv apkvaewivr
      121 eedyllfpve edpdilykpf vnvyfgaayl rwlsnfdgki rteefvvray sggtkkvnhk
      181 stlpywkryl qvkecylsrk qfdgpspiea ptfptspvsp skgfdlywds rvssedmehm
      241 wnhldvfkew ikskeirgkv rfscnkekkp ylsrvelrai aeiivskyfs trginptvlc
      301 aladvvsmrf idgnetstgl mgidystafw lyketgyray rvdyiedltn pfvsmyfgaa
      361 ylawlseyeg rerslqfifh ayisgpknvh leetcpkwlk feqilaryer tksregscni
      421 i
//
LOCUS       XP_016706482             404 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706482
VERSION     XP_016706482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850993.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..404
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=46940
     Region          59..174
                     /region_name="LT-like"
                     /note="lytic transglycosylase(LT)-like domain; cd00254"
                     /db_xref="CDD:381594"
     Site            order(69,92..94,97,132,153..154)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381594"
     Region          267..>383
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..404
                     /gene="LOC107921126"
                     /coded_by="XM_016850993.2:478..1692"
                     /db_xref="GeneID:107921126"
ORIGIN      
        1 msvsfkywde cadpedmeam wnhpevrtew tgagetegqr vhlsrdpdgq pyltqtemre
       61 micaiaeles nrqplamgcd kktnlitigi mqvapkvaew ivreedyllf pveedpdily
      121 kpfvnvyfga aylrwlsnfd gkirteefvv raysggtkkv nhkstlpywk rylqvkecyl
      181 srkqfdgpsp ieaptfptsp vspskgfdly wdsrvssedm ehmwnhldvf kewikskeir
      241 gkvrfscnke kkpylsrvel raiaeiivsk yfstrginpt vlcaladvvs mrfidgnets
      301 tglmgidyst afwlyketgy rayrvdyied ltnpfvsmyf gaaylawlse yegrerslqf
      361 ifhayisgpk nvhleetcpk wlkfeqilar yertksregs cnii
//
LOCUS       XP_016733654             550 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016733654
VERSION     XP_016733654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..550
                     /product="ataxin-10 isoform X1"
                     /calculated_mol_wt=60818
     Region          390..482
                     /region_name="Atx10homo_assoc"
                     /note="Spinocerebellar ataxia type 10 protein domain;
                     pfam09759"
                     /db_xref="CDD:462885"
     CDS             1..550
                     /gene="LOC107944343"
                     /coded_by="XM_016878165.2:212..1864"
                     /db_xref="GeneID:107944343"
ORIGIN      
        1 mvgeslpefn ypkdvlqpll sasnssslqq aleilikdsr aavgraelas knilptvlkl
       61 veslhrassr eylmqatkll rnlcagevan qnsfvehngi etvltvlrsa allsdpnfgi
      121 iclslqvlan vslagaehqq aiwlklfpne ffilasirsl etsdplcmil ytccdgkpgl
      181 aielcrdtgl pivagiirtf asvgsredwf klllsrlcle dihfpalffk lcegnasedr
      241 gntafgdnvf sseqafllri iseilnerin evrvpnetal cvlgifkrsv sivdfgarak
      301 sglptgstsv dvmgysliil rdicaqdglg dlkkdsvdvv dlllsndltn vilsllhdle
      361 ppaiirktlk dsenrelnlg stklcpykgf qrdlvaiign cayrrknvqd eirqksgill
      421 llqqcvtddd npylrewgiw slrnllegns enqqivadlq lqgsvdmpel arlglkvevd
      481 qnthraklvn ipgsytkpie rvgplkfmek mstrepqlhi qahhtatfil stkrpntntl
      541 pfgfpenvel
//
LOCUS       XP_040943038             500 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943038
VERSION     XP_040943038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087104.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..500
                     /product="ataxin-10 isoform X2"
                     /calculated_mol_wt=55075
     Region          390..482
                     /region_name="Atx10homo_assoc"
                     /note="Spinocerebellar ataxia type 10 protein domain;
                     pfam09759"
                     /db_xref="CDD:462885"
     CDS             1..500
                     /gene="LOC107944343"
                     /coded_by="XM_041087104.1:1259..2761"
                     /db_xref="GeneID:107944343"
ORIGIN      
        1 mvgeslpefn ypkdvlqpll sasnssslqq aleilikdsr aavgraelas knilptvlkl
       61 veslhrassr eylmqatkll rnlcagevan qnsfvehngi etvltvlrsa allsdpnfgi
      121 iclslqvlan vslagaehqq aiwlklfpne ffilasirsl etsdplcmil ytccdgkpgl
      181 aielcrdtgl pivagiirtf asvgsredwf klllsrlcle dihfpalffk lcegnasedr
      241 gntafgdnvf sseqafllri iseilnerin evrvpnetal cvlgifkrsv sivdfgarak
      301 sglptgstsv dvmgysliil rdicaqdglg dlkkdsvdvv dlllsndltn vilsllhdle
      361 ppaiirktlk dsenrelnlg stklcpykgf qrdlvaiign cayrrknvqd eirqksgill
      421 llqqcvtddd npylrewgiw slrnllegns enqqivadlq lqgsvdmpel arlglkvevd
      481 qnthraklvn ipgsytkpie
//
LOCUS       XP_040943039             120 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase MARCHF1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943039
VERSION     XP_040943039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087105.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="E3 ubiquitin-protein ligase MARCHF1 isoform X1"
                     /calculated_mol_wt=13174
     Region          45..>81
                     /region_name="RING_CH-C4HC3_MARCH"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); cd16495"
                     /db_xref="CDD:438158"
     Region          <98..120
                     /region_name="SecA"
                     /note="Preprotein translocase subunit SecA (ATPase, RNA
                     helicase) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG0653"
                     /db_xref="CDD:440418"
     CDS             1..120
                     /gene="LOC107922675"
                     /coded_by="XM_041087105.1:561..923"
                     /db_xref="GeneID:107922675"
ORIGIN      
        1 maisfvylli dnersiggia shgsptdtdp neidleagpa dqiqcqicle tdgrdfiapc
       61 kckgtskyvh recldhwrav kvqklmgstp ldlakfnmvk sgemsrnapc pcgskkrykr
//
LOCUS       XP_040943040              83 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translocase subunit SecA isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943040
VERSION     XP_040943040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087106.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..83
                     /product="protein translocase subunit SecA isoform X2"
                     /calculated_mol_wt=9288
     Region          <29..83
                     /region_name="SecA"
                     /note="Preprotein translocase subunit SecA (ATPase, RNA
                     helicase) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG0653"
                     /db_xref="CDD:440418"
     CDS             1..83
                     /gene="LOC107922675"
                     /coded_by="XM_041087106.1:728..979"
                     /db_xref="GeneID:107922675"
ORIGIN      
        1 mfrslasckd venalakftw akevhkkivk lkeegkpmpk nfaevqklmg stpldlakfn
       61 mvksgemsrn apcpcgskkr ykr
//
LOCUS       XP_040943041              83 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translocase subunit SecA isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943041
VERSION     XP_040943041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087107.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..83
                     /product="protein translocase subunit SecA isoform X2"
                     /calculated_mol_wt=9288
     Region          <29..83
                     /region_name="SecA"
                     /note="Preprotein translocase subunit SecA (ATPase, RNA
                     helicase) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG0653"
                     /db_xref="CDD:440418"
     CDS             1..83
                     /gene="LOC107922675"
                     /coded_by="XM_041087107.1:119..370"
                     /db_xref="GeneID:107922675"
ORIGIN      
        1 mfrslasckd venalakftw akevhkkivk lkeegkpmpk nfaevqklmg stpldlakfn
       61 mvksgemsrn apcpcgskkr ykr
//
LOCUS       XP_016702014             528 aa            linear   PLN 06-AUG-2024
DEFINITION  GRAS family protein RAD1 [Gossypium hirsutum].
ACCESSION   XP_016702014
VERSION     XP_016702014.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846525.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702014.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..528
                     /product="GRAS family protein RAD1"
                     /calculated_mol_wt=58936
     Region          150..519
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..528
                     /gene="LOC107917141"
                     /coded_by="XM_016846525.2:228..1814"
                     /db_xref="GeneID:107917141"
ORIGIN      
        1 megfngwlye sfnhdfairr fcsarveleq welgdamnne iepffpddei stphlaasev
       61 ddfvdsfinm dydvdddgdg ddkddrnskk qqnfhhfqdk ieafsivndd slmiegdele
      121 mssscedlga nemvpsieev shgvdqglhl vhlllacaea vgcrdihlat smlsqigasa
      181 tplgdslqrv sycfatglks rlsllqnvng ngtitncaid vpmiareekm eafqllyqtt
      241 pyiafgfmaa neaicqaaqg kgslhiidlg mkhtlqwpsl iralasrpeg pptlritalt
      301 sdedlvelea smkslvedas slsiamefhm isepvtpslm trenlnlreg eslyinsvmh
      361 lhkyvkesrg slkailqaik klgpalltmv eqdanhngpf flgrfleslq yysaifdsle
      421 aslprhspqr mkierlhfae eirnivayeg tdrmerhera dqwrrqlgra gfqvmglkcl
      481 sqarmmlsvy gcdgytlgse kgclllgwkg rplmlasawq lhnassay
//
LOCUS       XP_016706212             259 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit C-2 [Gossypium hirsutum].
ACCESSION   XP_016706212
VERSION     XP_016706212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850723.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..259
                     /product="nuclear transcription factor Y subunit C-2"
                     /calculated_mol_wt=28842
     Region          93..176
                     /region_name="HFD_NFYC-like"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit gamma (NF-YC) and similar proteins;
                     cd22908"
                     /db_xref="CDD:467033"
     Site            order(100..101,104..105,108..109,111..112,115,117..119,
                     121..122,124..126,128..135,137..139,142,151..155,158,167,
                     170..171,174..175)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467033"
     Site            order(100..104,106,110,117..120,150..152,154)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467033"
     Site            order(111,113,166..167,169..170,173..174)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467033"
     CDS             1..259
                     /gene="LOC107920899"
                     /coded_by="XM_016850723.2:259..1038"
                     /db_xref="GeneID:107920899"
ORIGIN      
        1 mdqrektqqq qqqpvmgvvp gagqigysta yqtasmvasg ttgvavpiqt qppatfsssp
       61 hqlayqqaqh fhhqqqqlqm fwanqmheie qtadfknhsl plarikkimk adkdvrmisa
      121 eapvifakac emfileltlr swihteenkr rtlqkndiaa aisrtdvfdf lvdiiprdel
      181 keeglgvtka tiplvgspad ipyyyvpqhp vgspgmimgk pidqaalypg qqprppmafm
      241 pwpqgqpqqq qseqqpsds
//
LOCUS       XP_016707237             113 aa            linear   PLN 06-AUG-2024
DEFINITION  SKP1-like protein 1A [Gossypium hirsutum].
ACCESSION   XP_016707237
VERSION     XP_016707237.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707237.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="SKP1-like protein 1A"
                     /calculated_mol_wt=13083
     Region          4..111
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     CDS             1..113
                     /gene="LOC107921953"
                     /coded_by="XM_016851748.2:24..365"
                     /db_xref="GeneID:107921953"
ORIGIN      
        1 mefgtvkmyy ednpdscdea iplpnvtsky lakvieyykw hvehrakkap kpvkikflqy
       61 eeeedeeaka fdkalfntld negmkqmima anyldakdll emltqavadr ikk
//
LOCUS       XP_016707202             470 aa            linear   PLN 06-AUG-2024
DEFINITION  ammonium transporter 2 member 5 [Gossypium hirsutum].
ACCESSION   XP_016707202
VERSION     XP_016707202.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851713.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="ammonium transporter 2 member 5"
                     /calculated_mol_wt=51416
     Region          27..442
                     /region_name="Ammonium_transp"
                     /note="Ammonium Transporter Family; cl03012"
                     /db_xref="CDD:445985"
     CDS             1..470
                     /gene="LOC107921894"
                     /coded_by="XM_016851713.2:106..1518"
                     /db_xref="GeneID:107921894"
ORIGIN      
        1 mnktsfsmpp nlnpdqaspd wmnkgdnawq ltaatlvglq sipgllilyg gsvkkkwavn
       61 safmvlyafa cvilcwaawg yrfsfgdkmi pfwgkpnfal dghylmeqtf lgkfpnatmv
      121 yfqgvfaait lvliagallg rmnfyawmlf vplwltfsyt itafsiwcpd gflakmgiid
      181 ysggyvihls sgvagftaay wvgprltqdr qrfppnnill mlfgagllwi gwtgfnggdp
      241 yvvsvdasla vinthictaa slltwllldi vffrkpsvig avqgmitglv citpaagvvq
      301 gwaavimgic sgsipwftmm vihkrsemfq kvddtmavlh thaiagslgg ilsgifavpk
      361 lnrlfygtsg hyiglfygla dkrthdgfrq igvqlvgvvf vvvlnivsts iicvvvqifm
      421 plrmseeeme igdeaahgee ayaiwgdeee kldpkyelak skaggqvemv
//
LOCUS       XP_016707726             519 aa            linear   PLN 06-AUG-2024
DEFINITION  succinate-semialdehyde dehydrogenase, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016707726
VERSION     XP_016707726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="succinate-semialdehyde dehydrogenase,
                     mitochondrial"
                     /calculated_mol_wt=55620
     Region          24..517
                     /region_name="PLN02278"
                     /note="succinic semialdehyde dehydrogenase"
                     /db_xref="CDD:215157"
     Site            order(101,110,151,154..155,157..165,171..173,178,260,272,
                     276,279,336,340,386,454,456..457,461,463,466,468..474,480,
                     483..484,490,495,507..513)
                     /site_type="other"
                     /note="tetramerization interface [polypeptide binding]"
                     /db_xref="CDD:143421"
     Site            order(186..190,198,213,215..216,264..267,270,273..274,
                     288..290,322,419,421,447,485)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143421"
     Site            order(190,288,319,322)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143421"
     CDS             1..519
                     /gene="LOC107922277"
                     /coded_by="XM_016852237.2:372..1931"
                     /db_xref="GeneID:107922277"
ORIGIN      
        1 mrvlqvlavs kiltshlsrt hrpsasrqms taasslkksp ifrtlgligg kwidaydakt
       61 iqvnnpstge iiaevpfmgt letndaissa sdafnswskl taaerskylr kwydlimank
      121 eelgqlitle qgkplkealg evnygasfie ffaeeakriy gdiipatlgd rrlfvlkqpv
      181 gvvgaitpwn fplamitrkv gpalacgctv vvkpseltpl talataelal qagippgvin
      241 vvmgnaskig dallastqvr kitftgstav gkklmagaae tvkrvslelg gnapcivfdd
      301 adldvavkgt laakfrnsgq tcvcanriiv qegiyekfae afskavrnlq vgdgftegvv
      361 qgplineaav qkvqtfiqda mskgakvllg gkrhslgmtf yeptivtdvk semllaseev
      421 fgpvapilrf kteeeaihma nntkaglaay iftnnvqrtw rvsealeygl vgvnegiist
      481 evapfggvkq sglgregsky gideylevky vclgdmnrs
//
LOCUS       XP_040943042             141 aa            linear   PLN 06-AUG-2024
DEFINITION  succinate-semialdehyde dehydrogenase, mitochondrial-like [Gossypium
            hirsutum].
ACCESSION   XP_040943042
VERSION     XP_040943042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087108.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..141
                     /product="succinate-semialdehyde dehydrogenase,
                     mitochondrial-like"
                     /calculated_mol_wt=15278
     Region          <3..139
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     CDS             1..141
                     /gene="LOC121213863"
                     /coded_by="XM_041087108.1:18..443"
                     /db_xref="GeneID:121213863"
ORIGIN      
        1 mpmskgakvl lggkrhslgm tfyeptivtd vksemllase evfgpvapil rfkteeeaih
       61 manntkagla ayiftnnvqr twrvsealey glvgvnegii stevapfggv kqsglgregs
      121 kygideylev kyvclgdmnr s
//
LOCUS       XP_040943043             115 aa            linear   PLN 06-AUG-2024
DEFINITION  succinate-semialdehyde dehydrogenase, mitochondrial-like [Gossypium
            hirsutum].
ACCESSION   XP_040943043
VERSION     XP_040943043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087109.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="succinate-semialdehyde dehydrogenase,
                     mitochondrial-like"
                     /calculated_mol_wt=12570
     Region          24..>79
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     CDS             1..115
                     /gene="LOC121213864"
                     /coded_by="XM_041087109.1:48..395"
                     /db_xref="GeneID:121213864"
ORIGIN      
        1 mrvlqvlavs kiltshlsrt hrpsasrqms taasslkksp ifrtlgligg kwidaydakt
       61 iqvnnpstge iiaevpfmal wrpmmpfllr lmllilgvns lllrgantle ngmil
//
LOCUS       XP_016706618             356 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016706618
VERSION     XP_016706618.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851129.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706618.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..356
                     /product="zinc transporter 1"
                     /calculated_mol_wt=37862
     Region          31..356
                     /region_name="zip"
                     /note="ZIP zinc/iron transport family; TIGR00820"
                     /db_xref="CDD:273287"
     CDS             1..356
                     /gene="LOC107921252"
                     /coded_by="XM_016851129.2:235..1305"
                     /db_xref="GeneID:107921252"
ORIGIN      
        1 mahfqlcslk ilqifsllli llypatvscd ctcdkediqq nkaealrykl gaiaailvag
       61 aigvslpllg tripalrpen diffmikafa agvilatgfv hilpdafesl tspclkessp
      121 wgkfpfsgfi ammsaigtlm idafatgyye rqhlskhkhv naadeehagh vhvhthathg
      181 hahgsaspsq elvlpglirq riisqvlevg ivvhsvvigi slgasqspdt irplvaalsf
      241 hqffegmglg gcisqaqfks vsvaimgtff slttplgiai gigissfyrd nsptglivdg
      301 vfnsasagil iymalvdlla adfmnprlqs nvrlqigvnl slllgtacms vlakwa
//
LOCUS       XP_016707772             603 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase [Gossypium hirsutum].
ACCESSION   XP_016707772
VERSION     XP_016707772.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852283.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..603
                     /product="CTP synthase"
                     /calculated_mol_wt=65734
     Region          1..557
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..603
                     /gene="LOC107922307"
                     /coded_by="XM_016852283.2:239..2050"
                     /db_xref="GeneID:107922307"
ORIGIN      
        1 mkyvlvtggv vsglgkgvta ssiglllksc glrvtsikid pylntdagtm spfehgevfv
       61 lddggevdld lgnyerfldi tltrennitt gkiyqsvidk erkgdylgkt vqvvphitde
      121 iqewieraam ipvdgkegpa dvcvielggt igdiesmpfi ealgqfsyrv gtgnfclvhv
      181 slvpvlsvvg eqktkptqhs vrglrglglt pnilacrstk alddnvkekl sqfchvpaen
      241 ivtlydvpni whiplllrdq kaheailkgl nllgiarepd ltewtartkn ydmlhdpvki
      301 amvgkyvglt dsylsvlkal lhasvhhrkk lvvewveash leditaeedp ntfkaawnhl
      361 kgadgilvpg gfgdrgvqgk ilaakyares dvpflgiclg mqiavieyar svlglhnans
      421 iefdpktsnp cvifmpegsk thmggtmrlg trrtylkvpd cksaklygda tfvderhrhr
      481 yevnpdmise leaagmsfvg rdesgrrmei velpshpffi gvqfhpefks rpgkpsalfs
      541 gliaascgel dellnksshv skvvgseisn gkatynghqn gsyfnalngs lngvcvngng
      601 vhh
//
LOCUS       XP_016707266            2086 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear-pore anchor isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707266
VERSION     XP_016707266.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707266.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2086
                     /product="nuclear-pore anchor isoform X1"
                     /calculated_mol_wt=233091
     Region          <56..831
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          779..>1555
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1040..1168
                     /region_name="TPR_MLP1_2"
                     /note="TPR/MLP1/MLP2-like protein; pfam07926"
                     /db_xref="CDD:462316"
     CDS             1..2086
                     /gene="LOC107921981"
                     /coded_by="XM_016851777.2:142..6402"
                     /db_xref="GeneID:107921981"
ORIGIN      
        1 mplfisddel srlsndaaav aeradafire lygeletaka kadadaitae qtcslleqkf
       61 lsisgelsdl qsqnaqlqss lderhadlaq aqaqkhqlqi qtigkdgeie rlttevselh
      121 kskrqllemi eqkdseiadk natikayldk ivnltdnsah kearlsetea elvrvqatct
      181 rlsqekelie rhnawlneel takvdnltqi rrthaelead mstrladvek qynecsssln
      241 whkertkele tkltslqeel csskevatsn eerfsaelsi anklvelyke sseewskkag
      301 elegaikale mhlgqvqddy kdrlekeasa kkqvekemad lkeelekcka eieagrkane
      361 mnllplgnft setwissyda ndmvednhal vpkipvgvsg talaaslird gwslakmyak
      421 yqeavdalrh eqlgrkeses ilqrvlreie ekavvimder aeherlleay tvinqklqnf
      481 tsdrasleka iqelkvdlrr herdnslaqk eiadlqkqvt vllkecrdiq lrcgslgqdf
      541 pggdatvaaa dmslepnadk viseltfkdi nglveqnvql rslvrdlsdq ieskemefke
      601 klelelkkqt deaaskvavv lqraeeqgrm ieslhtsvam ykklyeeehk lhlsyspaae
      661 aapdtgrrdl llllegsqea skkaqektte rlrcleedla kargeiislr serdklales
      721 nfareklesv mkeaeherdk ingvlarnve fsqliidyqk klressesln aaeecsrklt
      781 mevsilkqek dmlanaekra cdevrslser vyrlqasldt iqsaeevree tralerrkqe
      841 eyvkriekew aeakkqvqee rdnvrtlisd reqtlknamk qveemgkela nalharaaae
      901 arattsearl adleknlkss dakilaldgg tpsafstnea telpmtneei eklkeeakvn
      961 rdhmlqykni aqanedalkq melahenfki eaeklkksle aelvslrerv selenesslk
     1021 seevasatag keealssvla eitslkeeta vkssqimale iqissmkenl enehekwraa
     1081 qanyerqvil qsetiqeltk tsqelallqe easelrklad ahksenaelk arwemeksvl
     1141 eesrkeaekk ydelneqnki lhsrieamhi qfaekdrgsa laessvpdsh gdsglqnvin
     1201 ylrrtkqiae teisllkqek lrlqsqlena lkaeenakat lnaeransra vlmtedeiks
     1261 lqhqiremnl lresnmqlre enkhnfeecq klrevahkhk iesealesql merqfeveas
     1321 kkeiekhlte reilekrvse llercrnidv edynrlkndv lqkeenlkek daqieeitnl
     1381 lckkqdiisk leqdlanskl elnekdkkln dilqqeanlk sdiekqkklv vqfkrraesf
     1441 akekeqlsre nlklveelkq grrsgsditg dqvmkekeek dtriqilekt verqreelkk
     1501 ekdehqneka krikcertim eavrktekgk ttvlgeleky qlsvkrisee leklkhaegn
     1561 lpqgtsvvql lsgtisddha ssylsaaedf ekvarsilne lgtgsisgdv pavdnsapvl
     1621 tvsgtvvpdq gpviasstvp vtshqqpakt seerrsilpk tntdtrktgr rlvrprfvkp
     1681 eepqgdvems eamshdvdaq gtltsqnqqs vrkrlasats elsedlpvpg etstdvvvpa
     1741 lkkskgpdsg qeaaegqaaa lsenvgcpqv tdeaydnvgd etqgsneelv dvekeeadtm
     1801 eenleeskep qvdgtnevgl qenkndeild kpsgnevvad edsknpaeqd nlqpvletes
     1861 ereegelvpe vaadteggnd ahnvvgssev gdrqaelvss plaspsrvdd ealvtaaegd
     1921 nspdavndek neegyigees vaegseksnd gneqsvvetd pmpeaaaaav atsgtnesgt
     1981 tsgtpegevs knigsssgaa aaeaedvkqm spisgtgsgs gssatstlvn lqerareram
     2041 lrqagvlgst tsgrgrgrva vrargargrs arggragggp qnsdqq
//
LOCUS       XP_016707267            2084 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear-pore anchor isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707267
VERSION     XP_016707267.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851778.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707267.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2084
                     /product="nuclear-pore anchor isoform X2"
                     /calculated_mol_wt=232905
     Region          <56..831
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          779..>1555
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1040..1168
                     /region_name="TPR_MLP1_2"
                     /note="TPR/MLP1/MLP2-like protein; pfam07926"
                     /db_xref="CDD:462316"
     CDS             1..2084
                     /gene="LOC107921981"
                     /coded_by="XM_016851778.2:142..6396"
                     /db_xref="GeneID:107921981"
ORIGIN      
        1 mplfisddel srlsndaaav aeradafire lygeletaka kadadaitae qtcslleqkf
       61 lsisgelsdl qsqnaqlqss lderhadlaq aqaqkhqlqi qtigkdgeie rlttevselh
      121 kskrqllemi eqkdseiadk natikayldk ivnltdnsah kearlsetea elvrvqatct
      181 rlsqekelie rhnawlneel takvdnltqi rrthaelead mstrladvek qynecsssln
      241 whkertkele tkltslqeel csskevatsn eerfsaelsi anklvelyke sseewskkag
      301 elegaikale mhlgqvqddy kdrlekeasa kkqvekemad lkeelekcka eieagrkane
      361 mnllplgnft setwissyda ndmvednhal vpkipvgvsg talaaslird gwslakmyak
      421 yqeavdalrh eqlgrkeses ilqrvlreie ekavvimder aeherlleay tvinqklqnf
      481 tsdrasleka iqelkvdlrr herdnslaqk eiadlqkqvt vllkecrdiq lrcgslgqdf
      541 pggdatvaaa dmslepnadk viseltfkdi nglveqnvql rslvrdlsdq ieskemefke
      601 klelelkkqt deaaskvavv lqraeeqgrm ieslhtsvam ykklyeeehk lhlsyspaae
      661 aapdtgrrdl llllegsqea skkaqektte rlrcleedla kargeiislr serdklales
      721 nfareklesv mkeaeherdk ingvlarnve fsqliidyqk klressesln aaeecsrklt
      781 mevsilkqek dmlanaekra cdevrslser vyrlqasldt iqsaeevree tralerrkqe
      841 eyvkriekew aeakkqvqee rdnvrtlisd reqtlknamk qveemgkela nalharaaae
      901 arattsearl adleknlkss dakilaldgg tpsafstnea telpmtneei eklkeeakvn
      961 rdhmlqykni aqanedalkq melahenfki eaeklkksle aelvslrerv selenesslk
     1021 seevasatag keealssvla eitslkeeta vkssqimale iqissmkenl enehekwraa
     1081 qanyerqvil qsetiqeltk tsqelallqe easelrklad ahksenaelk arwemeksvl
     1141 eesrkeaekk ydelneqnki lhsrieamhi qfaekdrgsa laessvpdsh gdsglqnvin
     1201 ylrrtkqiae teisllkqek lrlqsqlena lkaeenakat lnaeransra vlmtedeiks
     1261 lqhqiremnl lresnmqlre enkhnfeecq klrevahkhk iesealesql merqfeveas
     1321 kkeiekhlte reilekrvse llercrnidv edynrlkndv lqkeenlkek daqieeitnl
     1381 lckkqdiisk leqdlanskl elnekdkkln dilqqeanlk sdiekqkklv vqfkrraesf
     1441 akekeqlsre nlklveelkq grrsgsditg dqvmkekeek dtriqilekt verqreelkk
     1501 ekdehqneka krikcertim eavrktekgk ttvlgeleky qlsvkrisee leklkhaegn
     1561 lpqgtsvvql lsgtisddha ssylsaaedf ekvarsilne lgtgsisgdv pavdnsapvl
     1621 tgtvvpdqgp viasstvpvt shqqpaktse errsilpktn tdtrktgrrl vrprfvkpee
     1681 pqgdvemsea mshdvdaqgt ltsqnqqsvr krlasatsel sedlpvpget stdvvvpalk
     1741 kskgpdsgqe aaegqaaals envgcpqvtd eaydnvgdet qgsneelvdv ekeeadtmee
     1801 nleeskepqv dgtnevglqe nkndeildkp sgnevvaded sknpaeqdnl qpvleteser
     1861 eegelvpeva adteggndah nvvgssevgd rqaelvsspl aspsrvddea lvtaaegdns
     1921 pdavndekne egyigeesva egseksndgn eqsvvetdpm peaaaaavat sgtnesgtts
     1981 gtpegevskn igsssgaaaa eaedvkqmsp isgtgsgsgs satstlvnlq erareramlr
     2041 qagvlgstts grgrgrvavr argargrsar ggragggpqn sdqq
//
LOCUS       XP_016707268            2081 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear-pore anchor isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707268
VERSION     XP_016707268.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707268.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2081
                     /product="nuclear-pore anchor isoform X3"
                     /calculated_mol_wt=232648
     Region          <56..831
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          779..>1555
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1040..1168
                     /region_name="TPR_MLP1_2"
                     /note="TPR/MLP1/MLP2-like protein; pfam07926"
                     /db_xref="CDD:462316"
     CDS             1..2081
                     /gene="LOC107921981"
                     /coded_by="XM_016851779.2:142..6387"
                     /db_xref="GeneID:107921981"
ORIGIN      
        1 mplfisddel srlsndaaav aeradafire lygeletaka kadadaitae qtcslleqkf
       61 lsisgelsdl qsqnaqlqss lderhadlaq aqaqkhqlqi qtigkdgeie rlttevselh
      121 kskrqllemi eqkdseiadk natikayldk ivnltdnsah kearlsetea elvrvqatct
      181 rlsqekelie rhnawlneel takvdnltqi rrthaelead mstrladvek qynecsssln
      241 whkertkele tkltslqeel csskevatsn eerfsaelsi anklvelyke sseewskkag
      301 elegaikale mhlgqvqddy kdrlekeasa kkqvekemad lkeelekcka eieagrkane
      361 mnllplgnft setwissyda ndmvednhal vpkipvgvsg talaaslird gwslakmyak
      421 yqeavdalrh eqlgrkeses ilqrvlreie ekavvimder aeherlleay tvinqklqnf
      481 tsdrasleka iqelkvdlrr herdnslaqk eiadlqkqvt vllkecrdiq lrcgslgqdf
      541 pggdatvaaa dmslepnadk viseltfkdi nglveqnvql rslvrdlsdq ieskemefke
      601 klelelkkqt deaaskvavv lqraeeqgrm ieslhtsvam ykklyeeehk lhlsyspaae
      661 aapdtgrrdl llllegsqea skkaqektte rlrcleedla kargeiislr serdklales
      721 nfareklesv mkeaeherdk ingvlarnve fsqliidyqk klressesln aaeecsrklt
      781 mevsilkqek dmlanaekra cdevrslser vyrlqasldt iqsaeevree tralerrkqe
      841 eyvkriekew aeakkqvqee rdnvrtlisd reqtlknamk qveemgkela nalharaaae
      901 arattsearl adleknlkss dakilaldgg tpsafstnea telpmtneei eklkeeakvn
      961 rdhmlqykni aqanedalkq melahenfki eaeklkksle aelvslrerv selenesslk
     1021 seevasatag keealssvla eitslkeeta vkssqimale iqissmkenl enehekwraa
     1081 qanyerqvil qsetiqeltk tsqelallqe easelrklad ahksenaelk arwemeksvl
     1141 eesrkeaekk ydelneqnki lhsrieamhi qfaekdrgsa laessvpdsh gdsglqnvin
     1201 ylrrtkqiae teisllkqek lrlqsqlena lkaeenakat lnaeransra vlmtedeiks
     1261 lqhqiremnl lresnmqlre enkhnfeecq klrevahkhk iesealesql merqfeveas
     1321 kkeiekhlte reilekrvse llercrnidv edynrlkndv lqkeenlkek daqieeitnl
     1381 lckkqdiisk leqdlanskl elnekdkkln dilqqeanlk sdiekqkklv vqfkrraesf
     1441 akekeqlsre nlklveelkq grrsgsditg dqvmkekeek dtriqilekt verqreelkk
     1501 ekdehqneka krikcertim eavrktekgk ttvlgeleky qlsvkrisee leklkhaegn
     1561 lpqgtsvvql lsgtisddha ssylsaaedf ekvarsilne lgtgsisgdv pavdnsapvl
     1621 tvpdqgpvia sstvpvtshq qpaktseerr silpktntdt rktgrrlvrp rfvkpeepqg
     1681 dvemseamsh dvdaqgtlts qnqqsvrkrl asatselsed lpvpgetstd vvvpalkksk
     1741 gpdsgqeaae gqaaalsenv gcpqvtdeay dnvgdetqgs neelvdveke eadtmeenle
     1801 eskepqvdgt nevglqenkn deildkpsgn evvadedskn paeqdnlqpv letesereeg
     1861 elvpevaadt eggndahnvv gssevgdrqa elvssplasp srvddealvt aaegdnspda
     1921 vndekneegy igeesvaegs eksndgneqs vvetdpmpea aaaavatsgt nesgttsgtp
     1981 egevsknigs ssgaaaaeae dvkqmspisg tgsgsgssat stlvnlqera reramlrqag
     2041 vlgsttsgrg rgrvavrarg argrsarggr agggpqnsdq q
//
LOCUS       XP_016706453             368 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706453
VERSION     XP_016706453.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850964.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..368
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41125
     CDS             1..368
                     /gene="LOC107921096"
                     /coded_by="XM_016850964.2:193..1299"
                     /db_xref="GeneID:107921096"
ORIGIN      
        1 mtlmtmlgav qlgaaaacvv vvlipmvmag whlsrnrill ycgvffitla vclhltpyfp
       61 svsdfvtsvs svvvfdhrst cinlvndiaw evkpnvslhh fnpthnvsss lnlyekrwdw
      121 skspkhdacd fqklsksdas dllngswvvv agdsqarfft lsllnlilgp qakrmgsvra
      181 dlfkrhsdys ilvheigmkl dfvwapyvvn ltnsmmgfkt kksypdvmvm gaglwhmlhv
      241 nnasnydfal rmlkssvvsl lpltasasik sphlfwlgmp mlingmlntq ekrekmsdri
      301 whaydralgd srllrqtggp lvlldiqsmt wncgprctsd gmhydlviye atvqvmlnal
      361 lieshqsl
//
LOCUS       XP_040943044             405 aa            linear   PLN 06-AUG-2024
DEFINITION  probable GMP synthase [glutamine-hydrolyzing] [Gossypium hirsutum].
ACCESSION   XP_040943044
VERSION     XP_040943044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087110.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="probable GMP synthase [glutamine-hydrolyzing]"
                     /calculated_mol_wt=44554
     Region          215..386
                     /region_name="Adenine_glyco"
                     /note="Methyladenine glycosylase; pfam03352"
                     /db_xref="CDD:460894"
     CDS             1..405
                     /gene="LOC107922225"
                     /coded_by="XM_041087110.1:123..1340"
                     /db_xref="GeneID:107922225"
ORIGIN      
        1 mctskakvtt gtthveitpp avaringrpv lqptcnrvps ldrrnslkki ppisppppas
       61 lpftpsatst ttvangsrar asltlplsps skfttkrgsd pnalnsssek vaiprnttkt
      121 ldrkksksfk egmgnnglss yiepslsyss sllveapgsi aavrreqval qqaqrkmkia
      181 hygrsksakf eskvvpldnt kpaeekkrcs fitpnsdpiy vayhdeewgv pihndsmlfe
      241 llvlsgaqvg sdwtsilkkr qdfrdafsgf daetvanfte kqmttissey gidisrvrgv
      301 vdnsnllevk refgsfdkyi wgfvnhkpms tqykfdhkip vktsksesis kdmvrrgfrf
      361 vgptvvhsfm qaagltndhl itchrhlpca llaiqrppvh slpdl
//
LOCUS       XP_040943045             111 aa            linear   PLN 06-AUG-2024
DEFINITION  protein HLB1 [Gossypium hirsutum].
ACCESSION   XP_040943045
VERSION     XP_040943045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087111.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..111
                     /product="protein HLB1"
                     /calculated_mol_wt=12056
     CDS             1..111
                     /gene="LOC121213867"
                     /coded_by="XM_041087111.1:469..804"
                     /db_xref="GeneID:121213867"
ORIGIN      
        1 mlplphlkeg nmttppvgna iaphrdwkrt efflnhealq rvikaeqkqv srslsgtiae
       61 vtneensair veipdivsvs scadltlppg aglcidttyg pifwfltcgn l
//
LOCUS       XP_016708158             251 aa            linear   PLN 06-AUG-2024
DEFINITION  THO complex subunit 4D [Gossypium hirsutum].
ACCESSION   XP_016708158
VERSION     XP_016708158.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852669.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708158.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="THO complex subunit 4D"
                     /calculated_mol_wt=27500
     Region          82..156
                     /region_name="RRM_THOC4"
                     /note="RNA recognition motif (RRM) found in THO complex
                     subunit 4 (THOC4) and similar proteins; cd12680"
                     /db_xref="CDD:410081"
     Site            order(100..101,104..105,137..138,140..143,145..149,152)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410081"
     CDS             1..251
                     /gene="LOC107922579"
                     /coded_by="XM_016852669.2:211..966"
                     /db_xref="GeneID:107922579"
ORIGIN      
        1 mptplddmvn rnntergrpr lrpprpgrmt latrrgplav narpsqhsit ksshktrslp
       61 wqhdlfedsl raagisgvev gtklyvsnld hgvtnedire lfseigelkr ysvhydkngr
      121 ssgsaevvyl rrsdafaalk rynnvlldgk pmiieivgan aevpvsarin vtgtkgrkkr
      181 tvvmtsgagq srssaginrg pnrrggmtmr sgrgggrgrg rgrgkrkpme ksaddldkel
      241 enyhaeamnv s
//
LOCUS       XP_016707549             479 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g76660 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707549
VERSION     XP_016707549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..479
                     /product="uncharacterized protein At1g76660 isoform X1"
                     /calculated_mol_wt=51531
     Region          <29..234
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..479
                     /gene="LOC107922170"
                     /coded_by="XM_016852060.2:336..1775"
                     /db_xref="GeneID:107922170"
ORIGIN      
        1 mgseqnrfpq qerqkrwggc wgafscfggt qkggkrivpa srmpegnasa tqpnngtqav
       61 agltnqattl apsllappss pasftnsalp staqspscfl slsanspggp sstmfatgpy
      121 ahetqlvspp vfstftteps tapltpppel ahlttpsspd vpfarfltss adlesanktn
      181 yiaandlqat yslypgspas slrspisrts adclsssfpe refppqwdps ispqngkhsr
      241 sgsgrlfghd vtgssigsqd tnffcpatfa efyldqnplp haggrlsvsk dsdvyptscs
      301 ghqnkqsksp kqdveeleay rasfgfsade iitttqyvei tdvtddsftm rpfpidkpaf
      361 eestepasia kgsktdriqe nfldekkgks ksdivnwavh hdvqvacngy edqksrrqvg
      421 dvsgsstpin htltdeediy lkksssrsrk yqlglsssda eidyrrgrsl rgkgdfech
//
LOCUS       XP_016707550             478 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g76660 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707550
VERSION     XP_016707550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="uncharacterized protein At1g76660 isoform X2"
                     /calculated_mol_wt=51403
     Region          <28..233
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..478
                     /gene="LOC107922170"
                     /coded_by="XM_016852061.2:518..1954"
                     /db_xref="GeneID:107922170"
ORIGIN      
        1 mgseqnrfpq qerkrwggcw gafscfggtq kggkrivpas rmpegnasat qpnngtqava
       61 gltnqattla psllappssp asftnsalps taqspscfls lsanspggps stmfatgpya
      121 hetqlvsppv fstfttepst apltpppela hlttpsspdv pfarfltssa dlesanktny
      181 iaandlqaty slypgspass lrspisrtsa dclsssfper efppqwdpsi spqngkhsrs
      241 gsgrlfghdv tgssigsqdt nffcpatfae fyldqnplph aggrlsvskd sdvyptscsg
      301 hqnkqskspk qdveeleayr asfgfsadei itttqyveit dvtddsftmr pfpidkpafe
      361 estepasiak gsktdriqen fldekkgksk sdivnwavhh dvqvacngye dqksrrqvgd
      421 vsgsstpinh tltdeediyl kksssrsrky qlglsssdae idyrrgrslr gkgdfech
//
LOCUS       XP_016707471            1283 aa            linear   PLN 06-AUG-2024
DEFINITION  stromal processing peptidase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707471
VERSION     XP_016707471.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851982.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707471.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1283
                     /product="stromal processing peptidase, chloroplastic"
                     /calculated_mol_wt=143599
     Region          209..680
                     /region_name="PqqL"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; COG0612"
                     /db_xref="CDD:440377"
     Region          773..1232
                     /region_name="PqqL"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; COG0612"
                     /db_xref="CDD:440377"
     CDS             1..1283
                     /gene="LOC107922130"
                     /coded_by="XM_016851982.2:217..4068"
                     /db_xref="GeneID:107922130"
ORIGIN      
        1 matsssssvm sailvphnrw dssssrgrrs lvrvnipvpa asvplarfhp taaaarwlgd
       61 lrdgnsiela yhnrnnnsmr qmklkkkkks dapkawkwst svshsqqlkk wipccsslsr
      121 ncygettpfp lpksaqpffl hksrfplath tfstsgkrfc ppcatvgpde phaasttcpd
      181 gllenqdfds lypqlqtsel eeflstelps npklhrgqlk nglrylilpn kvppnrfeah
      241 mevhvgside eddeqgiahm iehvaflgsk krekllgtga rsnaytdfhh tvfhihsptc
      301 tkdadedllp lvldalneia fhpkflssrv ekerrailse lqmmntieyr vdcqllqhlh
      361 senklskrfp igleeqikkw dadkirkfhe rwyfpanatl yivgdidnis ktinqieavf
      421 eqtgleneta spptssafga manflvpkls agfagssshe rssnssdqsk ilkkerlavr
      481 ppikhnwslp ghntnmkppq ifqhellqnf sinmfckipv skvrtfrdlr nvlmkrifls
      541 alhfrintry kssnppftsv eldhsdsgre gctvttltit aepknwqnai kvavqevrrl
      601 kefgvtkgel trymdallkd seqlsamidn vssvdnldfi mesdalghiv mdqrqghesl
      661 mavagtvtld evnsigaqvl efisdfgkpt aplpaavvac vpkkvhidgi getefkitas
      721 eiissiesgl kepieaepel evpkelispq qlqelrmqqk psfiplspei nvtklhdket
      781 gitqcrlsng ipvnykiskn etrggvmrli vgggraaets gskgavvvgv rtlseggrvg
      841 nfsreqvelf cvnhlincsl esteefisme frftlrdngm haafqllhmv lehsvwleda
      901 fdrarqlyls yyrsipksle rstahklmla mmdgderfve ptpkslqnlt lksvkdavmn
      961 qfvadnmevs ivgdfsqeei escildylgt vrasrdsere pefspilfrt spsdlqfqqv
     1021 flkdtderac ayiagpapnr wgftidgkdl lesvadipit deaqlhseeg nndqkdlrrk
     1081 lrehplffgi tmgllaevin srlfttvrds lgltydvsfe lnlfdrlklg wyvisvtstp
     1141 skvyksvdac knvlrglhsn kvaprelera krtllmrhea eiksnaywlg llahlqassv
     1201 prkdiscvke ltslyeaasi ediylaydhl kvdedslysc igiagvnage gamasleeee
     1261 snegfqgvip vgrglstmtr ptt
//
LOCUS       XP_040943046             445 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943046
VERSION     XP_040943046.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087112.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49732
     Region          29..299
                     /region_name="MPP_PhoD"
                     /note="Bacillus subtilis PhoD and related proteins,
                     metallophosphatase domain; cd07389"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..126,130..131,272,274)
                     /site_type="active"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..125,130..131,272,274)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277335"
     CDS             1..445
                     /gene="LOC107920892"
                     /coded_by="XM_041087112.1:275..1612"
                     /db_xref="GeneID:107920892"
ORIGIN      
        1 merlvaavla agvlqvllat addhyllsri afgscanqsa pqpiwdaink fdpqvfiwlg
       61 dniygdirrp fiflgkerti gpwqnaprfi pssssemlsr ynsaknvpgy lrlrakakvv
      121 gtwddhdygl ndagkefsak stnqrllldf ldepqdsprr kqagvytsyt fgppgkqvki
      181 illdtryhrd plssdgsvlg dsqwswlgke lrgppsaiti igssiqvisn lsgttgplfy
      241 meswgrfpke rdrlfklind skrdgvffis gdvhfgeitr ydcaagyply ditssgltqa
      301 vekvlpsplr fivrflawft pstmrvknqn cryrsctyge pnfgaiqinw daspvnlkiq
      361 vrdinglpvt gvdislselq awnrtikagq dqrhctlevk lpwivryrla ilvysvlall
      421 llalvglica vtlacrvclk kcktd
//
LOCUS       XP_040943047             445 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943047
VERSION     XP_040943047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087113.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49732
     Region          29..299
                     /region_name="MPP_PhoD"
                     /note="Bacillus subtilis PhoD and related proteins,
                     metallophosphatase domain; cd07389"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..126,130..131,272,274)
                     /site_type="active"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..125,130..131,272,274)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277335"
     CDS             1..445
                     /gene="LOC107920892"
                     /coded_by="XM_041087113.1:275..1612"
                     /db_xref="GeneID:107920892"
ORIGIN      
        1 merlvaavla agvlqvllat addhyllsri afgscanqsa pqpiwdaink fdpqvfiwlg
       61 dniygdirrp fiflgkerti gpwqnaprfi pssssemlsr ynsaknvpgy lrlrakakvv
      121 gtwddhdygl ndagkefsak stnqrllldf ldepqdsprr kqagvytsyt fgppgkqvki
      181 illdtryhrd plssdgsvlg dsqwswlgke lrgppsaiti igssiqvisn lsgttgplfy
      241 meswgrfpke rdrlfklind skrdgvffis gdvhfgeitr ydcaagyply ditssgltqa
      301 vekvlpsplr fivrflawft pstmrvknqn cryrsctyge pnfgaiqinw daspvnlkiq
      361 vrdinglpvt gvdislselq awnrtikagq dqrhctlevk lpwivryrla ilvysvlall
      421 llalvglica vtlacrvclk kcktd
//
LOCUS       XP_040943048             445 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943048
VERSION     XP_040943048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087114.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49732
     Region          29..299
                     /region_name="MPP_PhoD"
                     /note="Bacillus subtilis PhoD and related proteins,
                     metallophosphatase domain; cd07389"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..126,130..131,272,274)
                     /site_type="active"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..125,130..131,272,274)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277335"
     CDS             1..445
                     /gene="LOC107920892"
                     /coded_by="XM_041087114.1:275..1612"
                     /db_xref="GeneID:107920892"
ORIGIN      
        1 merlvaavla agvlqvllat addhyllsri afgscanqsa pqpiwdaink fdpqvfiwlg
       61 dniygdirrp fiflgkerti gpwqnaprfi pssssemlsr ynsaknvpgy lrlrakakvv
      121 gtwddhdygl ndagkefsak stnqrllldf ldepqdsprr kqagvytsyt fgppgkqvki
      181 illdtryhrd plssdgsvlg dsqwswlgke lrgppsaiti igssiqvisn lsgttgplfy
      241 meswgrfpke rdrlfklind skrdgvffis gdvhfgeitr ydcaagyply ditssgltqa
      301 vekvlpsplr fivrflawft pstmrvknqn cryrsctyge pnfgaiqinw daspvnlkiq
      361 vrdinglpvt gvdislselq awnrtikagq dqrhctlevk lpwivryrla ilvysvlall
      421 llalvglica vtlacrvclk kcktd
//
LOCUS       XP_040943049             445 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943049
VERSION     XP_040943049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087115.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49732
     Region          29..299
                     /region_name="MPP_PhoD"
                     /note="Bacillus subtilis PhoD and related proteins,
                     metallophosphatase domain; cd07389"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..126,130..131,272,274)
                     /site_type="active"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..125,130..131,272,274)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277335"
     CDS             1..445
                     /gene="LOC107920892"
                     /coded_by="XM_041087115.1:275..1612"
                     /db_xref="GeneID:107920892"
ORIGIN      
        1 merlvaavla agvlqvllat addhyllsri afgscanqsa pqpiwdaink fdpqvfiwlg
       61 dniygdirrp fiflgkerti gpwqnaprfi pssssemlsr ynsaknvpgy lrlrakakvv
      121 gtwddhdygl ndagkefsak stnqrllldf ldepqdsprr kqagvytsyt fgppgkqvki
      181 illdtryhrd plssdgsvlg dsqwswlgke lrgppsaiti igssiqvisn lsgttgplfy
      241 meswgrfpke rdrlfklind skrdgvffis gdvhfgeitr ydcaagyply ditssgltqa
      301 vekvlpsplr fivrflawft pstmrvknqn cryrsctyge pnfgaiqinw daspvnlkiq
      361 vrdinglpvt gvdislselq awnrtikagq dqrhctlevk lpwivryrla ilvysvlall
      421 llalvglica vtlacrvclk kcktd
//
LOCUS       XP_040943050             445 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943050
VERSION     XP_040943050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087116.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49732
     Region          29..299
                     /region_name="MPP_PhoD"
                     /note="Bacillus subtilis PhoD and related proteins,
                     metallophosphatase domain; cd07389"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..126,130..131,272,274)
                     /site_type="active"
                     /db_xref="CDD:277335"
     Site            order(35,61,64,124..125,130..131,272,274)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277335"
     CDS             1..445
                     /gene="LOC107920892"
                     /coded_by="XM_041087116.1:275..1612"
                     /db_xref="GeneID:107920892"
ORIGIN      
        1 merlvaavla agvlqvllat addhyllsri afgscanqsa pqpiwdaink fdpqvfiwlg
       61 dniygdirrp fiflgkerti gpwqnaprfi pssssemlsr ynsaknvpgy lrlrakakvv
      121 gtwddhdygl ndagkefsak stnqrllldf ldepqdsprr kqagvytsyt fgppgkqvki
      181 illdtryhrd plssdgsvlg dsqwswlgke lrgppsaiti igssiqvisn lsgttgplfy
      241 meswgrfpke rdrlfklind skrdgvffis gdvhfgeitr ydcaagyply ditssgltqa
      301 vekvlpsplr fivrflawft pstmrvknqn cryrsctyge pnfgaiqinw daspvnlkiq
      361 vrdinglpvt gvdislselq awnrtikagq dqrhctlevk lpwivryrla ilvysvlall
      421 llalvglica vtlacrvclk kcktd
//
LOCUS       XP_016706675             313 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MIZU-KUSSEI 1 [Gossypium hirsutum].
ACCESSION   XP_016706675
VERSION     XP_016706675.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851186.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706675.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..313
                     /product="protein MIZU-KUSSEI 1"
                     /calculated_mol_wt=34500
     Region          160..312
                     /region_name="DUF617"
                     /note="Protein of unknown function, DUF617; pfam04759"
                     /db_xref="CDD:428109"
     CDS             1..313
                     /gene="LOC107921306"
                     /coded_by="XM_016851186.2:36..977"
                     /db_xref="GeneID:107921306"
ORIGIN      
        1 mesmrlgwrd qifcisqsra psskagppfp lvgtiiahdc sppltfcfli yclqipllps
       61 hiaftftlhy idcsmrmmid lgsqrgplhi ntidmatsve cgrevrfrrs lwslvecmvp
      121 ccglppsmsg tvssdtessh gsittstsis tststitgtf fgyrkgrvsf clqddsrssp
      181 llllelgvpt aylaremqyg llrialecdd kskercglyn vpvwsmycng rkvgfaikrk
      241 msdndavvlk lmqsvsvgag vlpvspkcee dgelmymras fqrvigsphs hsfhmlnplg
      301 staqelsifl frs
//
LOCUS       XP_016706378             210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706378
VERSION     XP_016706378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850889.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..210
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22632
     Region          1..130
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..210
                     /gene="LOC107921033"
                     /coded_by="XM_016850889.2:563..1195"
                     /db_xref="GeneID:107921033"
ORIGIN      
        1 mgacfsyeip efsesgsrpt ahvislngdl hkynppvcas qvlhaeasss sssssssifl
       61 cnsdslsydd yvpalnadhq lqpnqiyfvl pvsklqqrla skdmaalavk asvaiqndsr
      121 ndsnrrkkar inpvmvvaqs vvdpvgastv saptpsstks ftksqtqpqp agmsrsasfr
      181 klqrytsrra klavrsfklr lstiyegsvl
//
LOCUS       XP_016706395             311 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division control protein 2 homolog D [Gossypium hirsutum].
ACCESSION   XP_016706395
VERSION     XP_016706395.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850906.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706395.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="cell division control protein 2 homolog D"
                     /calculated_mol_wt=35409
     Region          11..303
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(19..22,25,27,40,42,74,95..98,144,148..149,151,
                     162..163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..311
                     /gene="LOC107921050"
                     /coded_by="XM_016850906.2:372..1307"
                     /db_xref="GeneID:107921050"
ORIGIN      
        1 mekprqisam eafeklekvg egtygkvyra reratgkiva lkktrlhedd egvppttlre
       61 vsilrmlsrd phvvrlmdvk qgqnkegktv lylvfeymdt dlkkyirsfr qtgenipvni
      121 vkslmyqlck gvafchghgv lhrdlkphnl lmdrktmtlk iadlglaraf tlpikkythe
      181 iltlwyrape vllgathyst avdmwsvaci faelvtkqal fpgdselqql lhifrllgtp
      241 neqvwpgvss ltnwheypqw saqslasavp nldsdglhll semlqydpsk risakkameh
      301 pyfadlnkay i
//
LOCUS       XP_016707679             425 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707679
VERSION     XP_016707679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46878
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          338..418
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(338..342,349,351,353..354,390,411..412)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..425
                     /gene="LOC107922257"
                     /coded_by="XM_016852190.2:311..1588"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etqdcfevya lvpgllreev
      361 rvqsdpagrv vitgqpeqvd npwgitpfkk vvnlpsridp llttavvslh grllvrvpfe
      421 qgsaa
//
LOCUS       XP_016707680             425 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707680
VERSION     XP_016707680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46878
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          338..418
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(338..342,349,351,353..354,390,411..412)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..425
                     /gene="LOC107922257"
                     /coded_by="XM_016852191.2:314..1591"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etqdcfevya lvpgllreev
      361 rvqsdpagrv vitgqpeqvd npwgitpfkk vvnlpsridp llttavvslh grllvrvpfe
      421 qgsaa
//
LOCUS       XP_016707684             425 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707684
VERSION     XP_016707684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46878
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          338..418
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(338..342,349,351,353..354,390,411..412)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..425
                     /gene="LOC107922257"
                     /coded_by="XM_016852195.2:382..1659"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etqdcfevya lvpgllreev
      361 rvqsdpagrv vitgqpeqvd npwgitpfkk vvnlpsridp llttavvslh grllvrvpfe
      421 qgsaa
//
LOCUS       XP_016707682             425 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707682
VERSION     XP_016707682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46878
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          338..418
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(338..342,349,351,353..354,390,411..412)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..425
                     /gene="LOC107922257"
                     /coded_by="XM_016852193.2:268..1545"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etqdcfevya lvpgllreev
      361 rvqsdpagrv vitgqpeqvd npwgitpfkk vvnlpsridp llttavvslh grllvrvpfe
      421 qgsaa
//
LOCUS       XP_016707681             425 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707681
VERSION     XP_016707681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46878
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          338..418
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(338..342,349,351,353..354,390,411..412)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..425
                     /gene="LOC107922257"
                     /coded_by="XM_016852192.2:268..1545"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etqdcfevya lvpgllreev
      361 rvqsdpagrv vitgqpeqvd npwgitpfkk vvnlpsridp llttavvslh grllvrvpfe
      421 qgsaa
//
LOCUS       XP_040943051             425 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943051
VERSION     XP_040943051.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087117.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46878
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          338..418
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(338..342,349,351,353..354,390,411..412)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..425
                     /gene="LOC107922257"
                     /coded_by="XM_041087117.1:142..1419"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etqdcfevya lvpgllreev
      361 rvqsdpagrv vitgqpeqvd npwgitpfkk vvnlpsridp llttavvslh grllvrvpfe
      421 qgsaa
//
LOCUS       XP_016707685             424 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707685
VERSION     XP_016707685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852196.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X2"
                     /calculated_mol_wt=46750
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          339..417
                     /region_name="ACD_sHsps_p23-like"
                     /note="This domain family includes the alpha-crystallin
                     domain (ACD) of alpha-crystallin-type small heat shock
                     proteins (sHsps) and a similar domain found in p23-like
                     proteins. sHsps are small stress induced proteins with
                     monomeric masses between 12 -43 kDa; cd00298"
                     /db_xref="CDD:107219"
     CDS             1..424
                     /gene="LOC107922257"
                     /coded_by="XM_016852196.2:311..1585"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etdcfevyal vpgllreevr
      361 vqsdpagrvv itgqpeqvdn pwgitpfkkv vnlpsridpl lttavvslhg rllvrvpfeq
      421 gsaa
//
LOCUS       XP_040943052             424 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943052
VERSION     XP_040943052.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087118.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X2"
                     /calculated_mol_wt=46750
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          339..417
                     /region_name="ACD_sHsps_p23-like"
                     /note="This domain family includes the alpha-crystallin
                     domain (ACD) of alpha-crystallin-type small heat shock
                     proteins (sHsps) and a similar domain found in p23-like
                     proteins. sHsps are small stress induced proteins with
                     monomeric masses between 12 -43 kDa; cd00298"
                     /db_xref="CDD:107219"
     CDS             1..424
                     /gene="LOC107922257"
                     /coded_by="XM_041087118.1:314..1588"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etdcfevyal vpgllreevr
      361 vqsdpagrvv itgqpeqvdn pwgitpfkkv vnlpsridpl lttavvslhg rllvrvpfeq
      421 gsaa
//
LOCUS       XP_040943053             424 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943053
VERSION     XP_040943053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087119.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X2"
                     /calculated_mol_wt=46750
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          339..417
                     /region_name="ACD_sHsps_p23-like"
                     /note="This domain family includes the alpha-crystallin
                     domain (ACD) of alpha-crystallin-type small heat shock
                     proteins (sHsps) and a similar domain found in p23-like
                     proteins. sHsps are small stress induced proteins with
                     monomeric masses between 12 -43 kDa; cd00298"
                     /db_xref="CDD:107219"
     CDS             1..424
                     /gene="LOC107922257"
                     /coded_by="XM_041087119.1:245..1519"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etdcfevyal vpgllreevr
      361 vqsdpagrvv itgqpeqvdn pwgitpfkkv vnlpsridpl lttavvslhg rllvrvpfeq
      421 gsaa
//
LOCUS       XP_040943054             424 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-rich interactive domain-containing protein 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943054
VERSION     XP_040943054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087120.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="AT-rich interactive domain-containing protein 5
                     isoform X2"
                     /calculated_mol_wt=46750
     Region          131..222
                     /region_name="BRIGHT"
                     /note="ARID (A/T-rich interaction domain) domain;
                     smart00501"
                     /db_xref="CDD:128777"
     Region          339..417
                     /region_name="ACD_sHsps_p23-like"
                     /note="This domain family includes the alpha-crystallin
                     domain (ACD) of alpha-crystallin-type small heat shock
                     proteins (sHsps) and a similar domain found in p23-like
                     proteins. sHsps are small stress induced proteins with
                     monomeric masses between 12 -43 kDa; cd00298"
                     /db_xref="CDD:107219"
     CDS             1..424
                     /gene="LOC107922257"
                     /coded_by="XM_041087120.1:164..1438"
                     /db_xref="GeneID:107922257"
ORIGIN      
        1 medtemleqq lpeasqvnlv dtavqeqqss pptkdqnane tiadttstlp tdvnmtdnpp
       61 mpvkpdniss ngantdpsda ppaepleqkv ngdatplrsl apesgpekve kskswlldpe
      121 mgeadeagtp eeraafmkel esfykdrsle fkppkfygep lnclklwrav iklggyevvt
      181 asklwrqvge sfhppktctt vswtfrifye kalleyekyk rengeiqlpa sslphasgek
      241 essgflalgs grarrdaaar amqgwhaqrs vgygeitepi vkekimgsap krerhlksig
      301 lqkqkmpisa eldksahdkq liteivdvgt padwvkinvr etdcfevyal vpgllreevr
      361 vqsdpagrvv itgqpeqvdn pwgitpfkkv vnlpsridpl lttavvslhg rllvrvpfeq
      421 gsaa
//
LOCUS       XP_016707625             288 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 24-B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707625
VERSION     XP_016707625.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852136.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="RNA-binding protein 24-B isoform X1"
                     /calculated_mol_wt=30846
     Region          <20..237
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          32..107
                     /region_name="RRM_RBM24_RBM38_like"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein RBM24, RBM38 and similar proteins;
                     cd12384"
                     /db_xref="CDD:409818"
     CDS             1..288
                     /gene="LOC107922223"
                     /coded_by="XM_016852136.2:818..1684"
                     /db_xref="GeneID:107922223"
ORIGIN      
        1 mafqqilgps sgsssssgfq ymnspfgdtt ytkvfvggla wetqsetmrr yfeqfgeive
       61 avvitdkntg rskgygfvtf rdpesarrac adptpiidgr rancnlaslg rprppvpygi
      121 nsnlsgrlrp pspyiggvpr gayvgsigyq pplpynyqqg lmypsygyat ygpeyvypqg
      181 aynpyvaqqy lqiygvpgav npviypygql gqtvpsghgy tavqgyamps hqivqfggav
      241 anaittspmp tiqtpypggi aasvptqpqf ivttpqfmqg sgsdqttg
//
LOCUS       XP_016707626             281 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 38 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707626
VERSION     XP_016707626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..281
                     /product="RNA-binding protein 38 isoform X2"
                     /calculated_mol_wt=30160
     Region          <20..230
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          32..107
                     /region_name="RRM_RBM24_RBM38_like"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein RBM24, RBM38 and similar proteins;
                     cd12384"
                     /db_xref="CDD:409818"
     CDS             1..281
                     /gene="LOC107922223"
                     /coded_by="XM_016852137.2:817..1662"
                     /db_xref="GeneID:107922223"
ORIGIN      
        1 mafqqilgps sgsssssgfq ymnspfgdtt ytkvfvggla wetqsetmrr yfeqfgeive
       61 avvitdkntg rskgygfvtf rdpesarrac adptpiidgr rancnlaslg rprppvpygr
      121 lrppspyigg vprgayvgsi gyqpplpyny qqglmypsyg yatygpeyvy pqgaynpyva
      181 qqylqiygvp gavnpviypy gqlgqtvpsg hgytavqgya mpshqivqfg gavanaitts
      241 pmptiqtpyp ggiaasvptq pqfivttpqf mqgsgsdqtt g
//
LOCUS       XP_040943055             480 aa            linear   PLN 06-AUG-2024
DEFINITION  short-chain dehydrogenase/reductase family 42E member 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943055
VERSION     XP_040943055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087121.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="short-chain dehydrogenase/reductase family 42E
                     member 1 isoform X1"
                     /calculated_mol_wt=53632
     Region          13..354
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(18,20..21,23,43..45,85..87,127..129,158,162,
                     192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(105,129,158,162)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          389..473
                     /region_name="TMEM254"
                     /note="Transmembrane protein 254; pfam14934"
                     /db_xref="CDD:464385"
     CDS             1..480
                     /gene="LOC107922008"
                     /coded_by="XM_041087121.1:160..1602"
                     /db_xref="GeneID:107922008"
ORIGIN      
        1 mhlsenegie gntfvvtggl gfvgsalcle lirrgarqvr sfdlrhhspw slqltnhgvr
       61 clqgdltskk dvenalrgan cvfhlasygm sgkemlqfsr vdqvningtc hvleaclefg
      121 itrlvyvsty nvvfggkeiv ngnealpyfp iddhfdpygr sksiaeqvvl kyngrplknn
      181 igkclytcav rpaaiygpge erhlprivsm aklglvpfki gnsnvktdwv yvdnlllall
      241 lasmrllddi pgkegrpvaa gqpyfisdgs pintfefiqp llksldydlp kswlavshal
      301 ylakifwavy smlypllnrw wlpqpfilpa evykvglthy fsylkaqqel gyvpmvspre
      361 gmaatisywq drknksldgp tiyvwgiili gmislfasgw fppigpvpll rsiglmlfrs
      421 mfgirlafcl ataahigegm yawrlakrvd pdnatgwfwq tfalgfpslr lllkrakkva
//
LOCUS       XP_040943056             386 aa            linear   PLN 06-AUG-2024
DEFINITION  short-chain dehydrogenase/reductase family 42E member 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943056
VERSION     XP_040943056.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087122.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="short-chain dehydrogenase/reductase family 42E
                     member 1 isoform X2"
                     /calculated_mol_wt=43183
     Region          13..354
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(18,20..21,23,43..45,85..87,127..129,158,162,
                     192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(105,129,158,162)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..386
                     /gene="LOC107922008"
                     /coded_by="XM_041087122.1:137..1297"
                     /db_xref="GeneID:107922008"
ORIGIN      
        1 mhlsenegie gntfvvtggl gfvgsalcle lirrgarqvr sfdlrhhspw slqltnhgvr
       61 clqgdltskk dvenalrgan cvfhlasygm sgkemlqfsr vdqvningtc hvleaclefg
      121 itrlvyvsty nvvfggkeiv ngnealpyfp iddhfdpygr sksiaeqvvl kyngrplknn
      181 igkclytcav rpaaiygpge erhlprivsm aklglvpfki gnsnvktdwv yvdnlllall
      241 lasmrllddi pgkegrpvaa gqpyfisdgs pintfefiqp llksldydlp kswlavshal
      301 ylakifwavy smlypllnrw wlpqpfilpa evykvglthy fsylkaqqel gyvpmvspre
      361 gmaatisywq drknksldgp tiyhfa
//
LOCUS       XP_016707319             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_016707319
VERSION     XP_016707319.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851830.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_016851830.2:283..1377"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_016707322             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_016707322
VERSION     XP_016707322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_016851833.2:225..1319"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_040943057             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_040943057
VERSION     XP_040943057.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087123.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_041087123.1:416..1510"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_040943058             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_040943058
VERSION     XP_040943058.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087124.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_041087124.1:60..1154"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_016707321             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_016707321
VERSION     XP_016707321.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851832.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_016851832.2:587..1681"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_016707323             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_016707323
VERSION     XP_016707323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851834.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_016851834.2:195..1289"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_040943059             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_040943059
VERSION     XP_040943059.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087125.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_041087125.1:499..1593"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_040943060             364 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 10 [Gossypium hirsutum].
ACCESSION   XP_040943060
VERSION     XP_040943060.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087126.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..364
                     /product="AT-hook motif nuclear-localized protein 10"
                     /calculated_mol_wt=36899
     Region          180..295
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(180,182,184,187,212..213,230,237..240,242,244,259,
                     261,263,266,269,271..273,287,289,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..364
                     /gene="LOC107922009"
                     /coded_by="XM_041087126.1:172..1266"
                     /db_xref="GeneID:107922009"
ORIGIN      
        1 msgsetgmma srepyslgmq qkspvasqpa iqnmrlafra dgtavykpit pasltyqpas
       61 gdggaegsag gpavtqeqgq alnmsmsmgs eplkrkrgrp rkygpestmp lalipapssv
      121 svtqsnsggg fpsptppppp sggsasspts gkkargrppg scnkkhqlea lgsprvgftp
      181 hvitvkvged vsskimsfsq hgpravcils angaisnvtl cqpatsggtv tyegrfeils
      241 lsgsfllsen ggqrsrtggl svslsgpdgr vlgggvagll taaspvqvvv gsfitdnrke
      301 akstyqmegl sappkvapgv tsspshgtls essggpgspv nqsmgtcnnn nnnnpqgmsn
      361 fpwk
//
LOCUS       XP_016706202             147 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 3 [Gossypium hirsutum].
ACCESSION   XP_016706202
VERSION     XP_016706202.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850713.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="increased DNA methylation 3"
                     /calculated_mol_wt=15703
     Region          34..130
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(34..38,45,47,49..50,103,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..147
                     /gene="LOC107920894"
                     /coded_by="XM_016850713.2:330..773"
                     /db_xref="GeneID:107920894"
ORIGIN      
        1 mgvqdyaesk lkpsvdltgs akecsngpsi gvidigvsqs aflfrvalpg irsdqsklkc
       61 eiqrdgkvli qgivtqgsev lqglssvcqm tveklcspgp ftisfnlpgp vdprlfspkf
      121 rpdgilevvv mryrrpsdpv dawapps
//
LOCUS       XP_016706206             147 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 3 [Gossypium hirsutum].
ACCESSION   XP_016706206
VERSION     XP_016706206.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850717.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="increased DNA methylation 3"
                     /calculated_mol_wt=15703
     Region          34..130
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(34..38,45,47,49..50,103,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..147
                     /gene="LOC107920894"
                     /coded_by="XM_016850717.2:349..792"
                     /db_xref="GeneID:107920894"
ORIGIN      
        1 mgvqdyaesk lkpsvdltgs akecsngpsi gvidigvsqs aflfrvalpg irsdqsklkc
       61 eiqrdgkvli qgivtqgsev lqglssvcqm tveklcspgp ftisfnlpgp vdprlfspkf
      121 rpdgilevvv mryrrpsdpv dawapps
//
LOCUS       XP_016706203             147 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 3 [Gossypium hirsutum].
ACCESSION   XP_016706203
VERSION     XP_016706203.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850714.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="increased DNA methylation 3"
                     /calculated_mol_wt=15703
     Region          34..130
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(34..38,45,47,49..50,103,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..147
                     /gene="LOC107920894"
                     /coded_by="XM_016850714.2:337..780"
                     /db_xref="GeneID:107920894"
ORIGIN      
        1 mgvqdyaesk lkpsvdltgs akecsngpsi gvidigvsqs aflfrvalpg irsdqsklkc
       61 eiqrdgkvli qgivtqgsev lqglssvcqm tveklcspgp ftisfnlpgp vdprlfspkf
      121 rpdgilevvv mryrrpsdpv dawapps
//
LOCUS       XP_016706204             147 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 3 [Gossypium hirsutum].
ACCESSION   XP_016706204
VERSION     XP_016706204.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850715.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="increased DNA methylation 3"
                     /calculated_mol_wt=15703
     Region          34..130
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(34..38,45,47,49..50,103,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..147
                     /gene="LOC107920894"
                     /coded_by="XM_016850715.2:416..859"
                     /db_xref="GeneID:107920894"
ORIGIN      
        1 mgvqdyaesk lkpsvdltgs akecsngpsi gvidigvsqs aflfrvalpg irsdqsklkc
       61 eiqrdgkvli qgivtqgsev lqglssvcqm tveklcspgp ftisfnlpgp vdprlfspkf
      121 rpdgilevvv mryrrpsdpv dawapps
//
LOCUS       XP_016706207             147 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 3 [Gossypium hirsutum].
ACCESSION   XP_016706207
VERSION     XP_016706207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850718.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="increased DNA methylation 3"
                     /calculated_mol_wt=15703
     Region          34..130
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(34..38,45,47,49..50,103,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..147
                     /gene="LOC107920894"
                     /coded_by="XM_016850718.2:396..839"
                     /db_xref="GeneID:107920894"
ORIGIN      
        1 mgvqdyaesk lkpsvdltgs akecsngpsi gvidigvsqs aflfrvalpg irsdqsklkc
       61 eiqrdgkvli qgivtqgsev lqglssvcqm tveklcspgp ftisfnlpgp vdprlfspkf
      121 rpdgilevvv mryrrpsdpv dawapps
//
LOCUS       XP_016706205             147 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 3 [Gossypium hirsutum].
ACCESSION   XP_016706205
VERSION     XP_016706205.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850716.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="increased DNA methylation 3"
                     /calculated_mol_wt=15703
     Region          34..130
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(34..38,45,47,49..50,103,124..125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..147
                     /gene="LOC107920894"
                     /coded_by="XM_016850716.2:375..818"
                     /db_xref="GeneID:107920894"
ORIGIN      
        1 mgvqdyaesk lkpsvdltgs akecsngpsi gvidigvsqs aflfrvalpg irsdqsklkc
       61 eiqrdgkvli qgivtqgsev lqglssvcqm tveklcspgp ftisfnlpgp vdprlfspkf
      121 rpdgilevvv mryrrpsdpv dawapps
//
LOCUS       XP_016707304             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707304
VERSION     XP_016707304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851815.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_016851815.2:359..2578"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_016707305             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707305
VERSION     XP_016707305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851816.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_016851816.2:420..2639"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_016707303             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707303
VERSION     XP_016707303.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851814.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_016851814.2:358..2577"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_040943061             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943061
VERSION     XP_040943061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087127.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_041087127.1:129..2348"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_040943062             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943062
VERSION     XP_040943062.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087128.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_041087128.1:172..2391"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_016707307             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707307
VERSION     XP_016707307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851818.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_016851818.2:337..2556"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_016707301             739 aa            linear   PLN 06-AUG-2024
DEFINITION  monosaccharide-sensing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707301
VERSION     XP_016707301.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851812.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..739
                     /product="monosaccharide-sensing protein 2"
                     /calculated_mol_wt=79400
     Region          10..>208
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <516..713
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..739
                     /gene="LOC107922001"
                     /coded_by="XM_016851812.2:441..2660"
                     /db_xref="GeneID:107922001"
ORIGIN      
        1 mrgaafvaia atignflqgw dnatiagaiv yikndlnlgt sveglvvams ligataittc
       61 sgaisdwlgr rpmlimssml yfvsglvmlw spnvyilcla rlldgfgigl avtlvpvyis
      121 etapseirgl lntlpqftgs ggmflsycmv fgmslmdsps wrlmlgvlsi psllyfaftv
      181 fylpesprwl vskgrmleak qvlqrlrgre dvsgemallv eglgiggets ieeyiigpad
      241 eldesqepga dkdkirlygp eeglswvakp vagqsilsia srpgsmvnqs mplmdplvtl
      301 fgsvheklpe tgstrsmlfp nfgsmfstae pharneqwde eslqregedy asdaaggdsd
      361 dnlhsplisr qttslekdmv ppashissls mrrhstlvqd vtesvggtgi gggwqlawkw
      421 seregeggkk eggfkriylh eegipgsrrg slvslpgndm paegefiqaa alvsqpalys
      481 kelmdqhpvg pamvhpaeta segpvwtall dpgvkrallv gigiqilqqf sgingvlyyt
      541 pqileeagve vllsnlglgs dsasflisaf ttllmlpcig vamklmdisg rrrlllttip
      601 vlivsliilv fselvdlgtv vnaaistacv ivyfccfvmg ygpipnilcs eifptrvrgl
      661 ciaicalvyw igdiivtytl pvmlssigla gifgiyavvc liswvfvflk vpetkgmple
      721 viteffsvga rqagatkne
//
LOCUS       XP_016707308             189 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL80 [Gossypium hirsutum].
ACCESSION   XP_016707308
VERSION     XP_016707308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851819.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="RING-H2 finger protein ATL80"
                     /calculated_mol_wt=19840
     Region          105..148
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            133..138
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..189
                     /gene="LOC107922003"
                     /coded_by="XM_016851819.2:225..794"
                     /db_xref="GeneID:107922003"
ORIGIN      
        1 mtrpfrllga anssattepp peqsatvdsd fvvilaallc alicvlglia varcawlrrl
       61 sgafapnpsa ssrptppank glkkkilksl pkatfspdfs akfsdcaicl tefaagdeir
      121 vlpqcghgfh vvcidtwlgs hsscpscrqi lvarcqkcgg lpgpgastsg tntearlker
      181 eddvntflp
//
LOCUS       XP_016707157             109 aa            linear   PLN 06-AUG-2024
DEFINITION  chromodomain-helicase-DNA-binding protein 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707157
VERSION     XP_016707157.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851668.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="chromodomain-helicase-DNA-binding protein 3
                     isoform X1"
                     /calculated_mol_wt=12526
     Region          1..>26
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          <21..>60
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     CDS             1..109
                     /gene="LOC107921828"
                     /coded_by="XM_016851668.2:57..386"
                     /db_xref="GeneID:107921828"
ORIGIN      
        1 micidnsewm rnddyslsrf eaqarahrlg qkkdvlvlrf etvqtveeqv rasaehklav
       61 anqsitvgff dnntrnyssi khhycnsccs qfveshgysc wccfkpinl
//
LOCUS       XP_016707158             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707158
VERSION     XP_016707158.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851669.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12307
     CDS             1..105
                     /gene="LOC107921828"
                     /coded_by="XM_016851669.2:145..462"
                     /db_xref="GeneID:107921828"
ORIGIN      
        1 mylfyvlkqf kllknksell lntnwqllir vslsvssiii qahgdkfaak rmrrltqrra
       61 vdytstvvry mnyssikhhy cnsccsqfve shgyscwccf kpinl
//
LOCUS       XP_016707159             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707159
VERSION     XP_016707159.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851670.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..104
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=12311
     CDS             1..104
                     /gene="LOC107921828"
                     /coded_by="XM_016851670.2:149..463"
                     /db_xref="GeneID:107921828"
ORIGIN      
        1 mylfyvlkqf kllknksell lntnwqllir vslsvssiii qahgdkfaak rmrrltqrra
       61 vdytstvvry mqelqfhqtp llqflllpic ripwlqllvl lqth
//
LOCUS       XP_040943063             611 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 1A [Gossypium hirsutum].
ACCESSION   XP_040943063
VERSION     XP_040943063.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087129.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..611
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 1A"
                     /calculated_mol_wt=68467
     Region          25..452
                     /region_name="Ribophorin_I"
                     /note="Ribophorin I; pfam04597"
                     /db_xref="CDD:428028"
     Region          513..>604
                     /region_name="DegS"
                     /note="Sensor protein DegS; pfam05384"
                     /db_xref="CDD:428449"
     CDS             1..611
                     /gene="LOC107922507"
                     /coded_by="XM_041087129.1:553..2388"
                     /db_xref="GeneID:107922507"
ORIGIN      
        1 mgisrfvllv ftismlaspa lsdlvlskvd rriyltshiv risstleven agpetvskvl
       61 lafpdlqaqn laylmasphe akakvkvsvv sfpidvvkpe dmppgvtfys vslpqgltvg
      121 asftfdvlav fthalrpmpe qigqadiqlv lyqdsayyls pyvvkvqsls lklldsries
      181 yttlestkvq gseikygpye nlpafssspi tvhfennlpf aiaqelvrei eishwgnvlv
      241 tehyklihgg aqskgefsrl epqarenvqg psavrylvah lpprahsvyy rdaignists
      301 hlrgdskkte llieprypmf ggwrtaftig yglplqdcly esegrrflni tfsspmielv
      361 idtlivkvvl pegssdisaa apffmkqwqe tkishldivg ravvvlektn lvpehnqyfq
      421 vyykfnrlsm lreplmlisg iffffvaciv ymhadtsisk fsasylakqq weevrvaiqq
      481 vhniicrcla thdkleaslr dlsrtgevqa ckaarkstdg llkelskelk plmtflqssp
      541 savqvlskve elvakerell eklmakhsta veayekksga rdienrialq qqkitalrqe
      601 vddllefide i
//
LOCUS       XP_016708072             229 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016708072
VERSION     XP_016708072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852583.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="peptidyl-prolyl cis-trans isomerase FKBP18,
                     chloroplastic"
                     /calculated_mol_wt=25088
     Region          103..221
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..229
                     /gene="LOC107922508"
                     /coded_by="XM_016852583.2:113..802"
                     /db_xref="GeneID:107922508"
ORIGIN      
        1 mgsasatilq rwildfhkli fcpkctanqt lntnqlvvsv pisrrsaill ssvptltlip
       61 lphfseagar errnkktipi edylttpegl kyydivkgkg pvaekgstvq vhfdciyrgi
      121 tavssreskl lagnriiaqp yefkvgatpg kerkreyvdn pnglfsaqaa pkpppamyyi
      181 tegmkvggkr tvivhpeagy gqkgmneipp gaefelniel lqvmpppen
//
LOCUS       XP_016707994             454 aa            linear   PLN 06-AUG-2024
DEFINITION  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016707994
VERSION     XP_016707994.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852505.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707994.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..454
                     /product="glyceraldehyde-3-phosphate dehydrogenase B,
                     chloroplastic"
                     /calculated_mol_wt=48320
     Region          3..454
                     /region_name="PLN02237"
                     /note="glyceraldehyde-3-phosphate dehydrogenase B"
                     /db_xref="CDD:215131"
     CDS             1..454
                     /gene="LOC107922459"
                     /coded_by="XM_016852505.2:435..1799"
                     /db_xref="GeneID:107922459"
ORIGIN      
        1 matnaalaps ripantrlps ktthsfptqc sskrlevtef sglrssscvt faknvrdasf
       61 fdvlaaqltp kgvgvpstsv rgetvaklkv aingfgrigr nflrcwhgrk dsplevvvvn
      121 dsggvknash llkydsmlgt fkadvkivdn etisvdgkpi kvvsnrdplk lpwaelgidi
      181 viegtgvfvd gpgagkhiqa gakkviitap akgadiptyv vgvnegdydh evsniisnas
      241 cttnclapfv kvideefgiv kgtmttthsy tgdqrlldas hrdlrraraa alnivptstg
      301 aakavslvlp qlkgklngia lrvptpnvsv vdlvvnvekk gitaedvnaa frksaegplk
      361 gvlevcdipl vsvdfrcsdv sstidssltm vmgddmvkvv awydnewgys qrvvdlahlv
      421 askwpgmpva gsgdpledyc ktnpadeeck vyea
//
LOCUS       XP_016707995             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707995
VERSION     XP_016707995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16973
     Region          <2..102
                     /region_name="PRK15217"
                     /note="fimbrial outer membrane usher protein; Provisional"
                     /db_xref="CDD:185139"
     CDS             1..162
                     /gene="LOC107922460"
                     /coded_by="XM_016852506.2:457..945"
                     /db_xref="GeneID:107922460"
ORIGIN      
        1 mttlsnslvl stnpplqlfs gshgsasstn lafnsshlrk lhistsrrpl tvqasysdge
       61 rsssanafvg gfvlgglvvg algcvfapqi skalavadsk dlmkrlpkfi ydeekalekt
      121 rkvltekiaq lnaaiddvsg qlrsedapng vavnsdeiea ai
//
LOCUS       XP_016707405             882 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE1b [Gossypium
            hirsutum].
ACCESSION   XP_016707405
VERSION     XP_016707405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..882
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE1b"
                     /calculated_mol_wt=99959
     Region          46..>256
                     /region_name="Luminal_IRE1_like"
                     /note="The Luminal domain, a dimerization domain, of
                     Inositol-requiring protein 1-like proteins; cl14874"
                     /db_xref="CDD:276097"
     Site            order(133..137,143,145..148,150..152,164,166..168,
                     212..213,221,223,238,240..242)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188873"
     Region          453..746
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(461..464,468,470,481,483,510,526..529,611,615..616,
                     618,630..631)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          749..876
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(749..750,753,757,823,841,872,875..876)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(751,849,853,856..857,861)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(753,757,760..761,820,823..824,827,840..842,871..872,
                     875)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..882
                     /gene="LOC107922082"
                     /coded_by="XM_016851916.2:186..2834"
                     /db_xref="GeneID:107922082"
ORIGIN      
        1 mrrsriflll lailfspsir gffcsqisqt alsnrflppp ppddglavvv tldgtmhlvd
       61 rvsrkvhwsf asgrpiyssy qafldqdndk lnasgpnsdl yvdcgddlql yvhsrshgkl
      121 kklelsaeey vrrtpyiaed ggitlgvkkt siylvdansg riiqtyrsdd ppstldiqnd
      181 agktvrwtkg adalvefgpf nsttvkqfvy imrtdyvlqy yspnsaevlw nvafskidae
      241 frcqgpeekl sadymhdfel qlpcqkrpvv iqvrdhklle slpvfgwldg iiplpssnqn
      301 prlppadvla lpsdkpwlal pasemenplm ldtantnitt rfdiagssiq pfisffatll
      361 tiivfafyrl krgkgskqdq evklqsvpkk kkpkrvgnsk ssgnnekknk pvseennvgn
      421 tntlpyiern eaksllnftd lvdgrvdgrr igkllvsnke iakgsngtiv legiydgrpv
      481 avkrlvqthh dvalkeiqnl iasdqhpniv rwygvefdqd fvylslerct cslndliyvc
      541 sesfqnqaiv kdedskffne cnvrlhsvme nnkvielwkp nghpslhllk lmrdivsgla
      601 hlhelgiihr dlkpqnvlii mekslcakls dmgiskrltg dmssltrgat gygssgwqap
      661 eqlrqgrqtr avdlfslgcv lffcitggkh pygdsierdv nivndrkdlf liesipeamd
      721 lfshlldpnp elrpkaqdvl hhplfwssem rlsflreasd rveledrksa sevlnelesi
      781 aavaldgkwd eklepaflnn ighyrrykfd svrdllrvir nkqnhyreip qdiqellgpl
      841 pegfdgyfss rfpkllievy kvlykhckee kffqkymnss ii
//
LOCUS       XP_016707406             456 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase 12 [Gossypium hirsutum].
ACCESSION   XP_016707406
VERSION     XP_016707406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851917.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..456
                     /product="glucan endo-1,3-beta-glucosidase 12"
                     /calculated_mol_wt=49655
     Region          23..342
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          369..453
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..456
                     /gene="LOC107922083"
                     /coded_by="XM_016851917.2:554..1924"
                     /db_xref="GeneID:107922083"
ORIGIN      
        1 malhlfhlll flllsplsyv ssvginygtl gnnlpspkkv aqllqstlid kvkiydtnpd
       61 ileafsntgi dlivavenyh vaniskdaaa addwfatrvq pfipatsiva vcvgneylts
      121 ddnldpdalv qamqnlhavl lkrgldrkik vttphsmavl assfppsast fatkliptms
      181 sivgfladtg apfmvnaypy fayrdnpstv dleyallgns tgvhdpkgyi yhnmldaqid
      241 avrsaidaig fgnlsmkitv sesgwpskgd sedtaatpnn aktyntrlie raqsnkgtpm
      301 kpkdnieifv falfnenkkp ggasernfgi fngdgskvye vdlscefcsn ggafekmsts
      361 gqvrgpsvwc vakphadekv lqtvldfccg pggvdcrevy esgkcfepdk lhahasyamn
      421 ayyqmhgrny wncdfkgtgl vtfsdpsygt cryrqq
//
LOCUS       XP_016707368             381 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 27 [Gossypium hirsutum].
ACCESSION   XP_016707368
VERSION     XP_016707368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851879.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="probable protein phosphatase 2C 27"
                     /calculated_mol_wt=41575
     Region          40..380
                     /region_name="PLN03145"
                     /note="Protein phosphatase 2c; Provisional"
                     /db_xref="CDD:215603"
     CDS             1..381
                     /gene="LOC107922047"
                     /coded_by="XM_016851879.2:214..1359"
                     /db_xref="GeneID:107922047"
ORIGIN      
        1 maarmdfspp faiieggytn dnvpdmdnek ldnekqvtlg kpprhlsimq hcvssgrlia
       61 eanleldvgi vvlksssdek teflpvlrsg scaeigpkqy medehicidd lighletttk
      121 vpslgafygv fdghggtdaa ifirenilkf ivedshfpic vekaiksafl kadyafadas
      181 sldissgtta ltalifgrtl iianagdcra vlgrrgraie mskdhkpnct serlrieklg
      241 gviydgylng qlsvaralgd whmkgpkgsa cplsaepelq vtdlsdedef lvmgcdglwd
      301 vmssqcavtm arkelmlhnd percsrelvr ealkrntcdn ltvivvcfsa eppprieipq
      361 srvrrsisse glnllkgvld c
//
LOCUS       XP_016707369             177 aa            linear   PLN 06-AUG-2024
DEFINITION  protein canopy-1 [Gossypium hirsutum].
ACCESSION   XP_016707369
VERSION     XP_016707369.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851880.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="protein canopy-1"
                     /calculated_mol_wt=20029
     Region          24..164
                     /region_name="DUF3456"
                     /note="TLR4 regulator and MIR-interacting MSAP; pfam11938"
                     /db_xref="CDD:463404"
     CDS             1..177
                     /gene="LOC107922048"
                     /coded_by="XM_016851880.2:186..719"
                     /db_xref="GeneID:107922048"
ORIGIN      
        1 maapmlwlls ifsifsiaac iddkcaacna vaaeleiqls kekprnhldm rhrldskgqr
       61 qgkvidyrms elravelldg lcekmqdytl ekldssrrew ikvhnwdilt idkqeakays
      121 kdissycgrl leetedelte likkgsvkqg dvskvlcedl sehcsgssdr dsdndel
//
LOCUS       XP_016707609             579 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g42350 [Gossypium hirsutum].
ACCESSION   XP_016707609
VERSION     XP_016707609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852120.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..579
                     /product="F-box/kelch-repeat protein At5g42350"
                     /calculated_mol_wt=66020
     Region          137..174
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(138,142,145..146,149..150,154,156..157,161..163,165)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          <188..423
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          224..278
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          312..405
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..579
                     /gene="LOC107922217"
                     /coded_by="XM_016852120.2:482..2221"
                     /db_xref="GeneID:107922217"
ORIGIN      
        1 mfsesvseea lrqdfetltv skrlvrsvsq klrkknhrge ggeedkvrgv slkcltlygr
       61 gggckvgadt geelgdpsyr rrssaseegk vyksicgied nnfdcfsygv rekfwkknnr
      121 kdldleesvr nsrmhiflpd dilemclvrl pltslmnarl vckkwrhltt tprflqmrre
      181 gscqkpwlfl fgavkdgycs geihaldvsq dqwhricadi lrgrfmfsva smqddiyivg
      241 gcssltnfgr vdrssfkthk gvlvfspltk swrkassmkf arsmpilgis evcsdfsviq
      301 shqnrhdrqf prsrvggvsd vyedphrlsl rrqyrnafde ngpsllpnrr sykfirqrse
      361 qanmkgckrf vliavgglgs wdeplnsgei ydslsnkwse iqklpidfgv vcagvvcngm
      421 fyvcsendkl agydiergfw igiqtsafpp hvheyypklv scngslflls vswcegdgqi
      481 grrnkavrkl weldlmyltw tevsvhpdap mdwnpvfvad rnlifgvemf kifgqvldff
      541 tvcdvsdvem nwshisrnhm aheldasscm tktmavlhl
//
LOCUS       XP_016707461             813 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 44 [Gossypium hirsutum].
ACCESSION   XP_016707461
VERSION     XP_016707461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851972.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..813
                     /product="U-box domain-containing protein 44"
                     /calculated_mol_wt=89257
     Region          30..87
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(31,34,36..39,58,62,76)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          145..177
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(168,172,176,210,214,218,254,258,262)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          185..221
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          227..263
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..813
                     /gene="LOC107922124"
                     /coded_by="XM_016851972.2:686..3127"
                     /db_xref="GeneID:107922124"
ORIGIN      
        1 magswdgsyd pgsqsddshh ferlhieply dafvcpltkq vmrdpvtlen gqtfereaie
       61 kwfkecresg rrlvcpltqk elksadlnps ialrntieew ttrneaaqld marrslnmns
      121 seddvllslr fiqriclknr snkhavrnad lipmivdmlk sssrkvrcka letllavvee
      181 dednkailae gdtvrtivkf lsheqskere eavsllyels ksealcekig singaililv
      241 gmtsskseni stvekadktl enlekcennv rqmaengrlq plltqilegp petkhsmaay
      301 lgdlvlnndv kvhvaktvge slinimksgn mqsreaalka lnqissfdas skvlieagil
      361 pplvrdlftv ganqlpmrlk evsatilsnv vnsgydvdsi pigldhqtlv sednvhnllh
      421 lisntgppie ckllqvlvgl tnspttvlnv vaaikssgat islvqfievp qkdlrmasik
      481 llqnlsphmg qeladalrgt vgqlsslirv isentgisee qaaaagllae lperdvgltr
      541 qmldegafql iisrvvkikq gdirgtrfvt pfleglvrvl arvtfvlsde pvavalcreh
      601 glaalfvdll qtngidnvqm vsaaalenls lesknltrlp empppgfcat ifpcfskqav
      661 itglcrvhrg tcslkesfcl legqavhklv alldhtnakv veaalaalst llddgvdieq
      721 gvsvlceaeg ikpildvllk kqtenlrrra vwvverllrn ddiayevsgd qnvstalvda
      781 fhhadyrtrq iaeralkhvd kipnfsgifp nmg
//
LOCUS       XP_016707462             813 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 44 [Gossypium hirsutum].
ACCESSION   XP_016707462
VERSION     XP_016707462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851973.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..813
                     /product="U-box domain-containing protein 44"
                     /calculated_mol_wt=89257
     Region          30..87
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(31,34,36..39,58,62,76)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          145..177
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(168,172,176,210,214,218,254,258,262)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          185..221
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          227..263
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..813
                     /gene="LOC107922124"
                     /coded_by="XM_016851973.2:723..3164"
                     /db_xref="GeneID:107922124"
ORIGIN      
        1 magswdgsyd pgsqsddshh ferlhieply dafvcpltkq vmrdpvtlen gqtfereaie
       61 kwfkecresg rrlvcpltqk elksadlnps ialrntieew ttrneaaqld marrslnmns
      121 seddvllslr fiqriclknr snkhavrnad lipmivdmlk sssrkvrcka letllavvee
      181 dednkailae gdtvrtivkf lsheqskere eavsllyels ksealcekig singaililv
      241 gmtsskseni stvekadktl enlekcennv rqmaengrlq plltqilegp petkhsmaay
      301 lgdlvlnndv kvhvaktvge slinimksgn mqsreaalka lnqissfdas skvlieagil
      361 pplvrdlftv ganqlpmrlk evsatilsnv vnsgydvdsi pigldhqtlv sednvhnllh
      421 lisntgppie ckllqvlvgl tnspttvlnv vaaikssgat islvqfievp qkdlrmasik
      481 llqnlsphmg qeladalrgt vgqlsslirv isentgisee qaaaagllae lperdvgltr
      541 qmldegafql iisrvvkikq gdirgtrfvt pfleglvrvl arvtfvlsde pvavalcreh
      601 glaalfvdll qtngidnvqm vsaaalenls lesknltrlp empppgfcat ifpcfskqav
      661 itglcrvhrg tcslkesfcl legqavhklv alldhtnakv veaalaalst llddgvdieq
      721 gvsvlceaeg ikpildvllk kqtenlrrra vwvverllrn ddiayevsgd qnvstalvda
      781 fhhadyrtrq iaeralkhvd kipnfsgifp nmg
//
LOCUS       XP_016707298            1030 aa            linear   PLN 06-AUG-2024
DEFINITION  epidermal growth factor receptor substrate 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707298
VERSION     XP_016707298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851809.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1030
                     /product="epidermal growth factor receptor substrate 15
                     isoform X1"
                     /calculated_mol_wt=111503
     Region          9..75
                     /region_name="EH"
                     /note="Eps15 homology domain; found in proteins implicated
                     in endocytosis, vesicle transport, and signal
                     transduction. The alignment contains a pair of EF-hand
                     motifs, typically one of them is canonical and binds to
                     Ca2+, while the other may not bind to Ca2+. A...; cd00052"
                     /db_xref="CDD:238009"
     Site            order(15..17,24..28)
                     /site_type="active"
                     /note="pseudo EF-hand loop [active]"
                     /db_xref="CDD:238009"
     Site            order(33,43,47)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:238009"
     Site            order(51,53,55,62)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238009"
     Region          <96..403
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          370..461
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          <559..689
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     CDS             1..1030
                     /gene="LOC107922000"
                     /coded_by="XM_016851809.2:385..3477"
                     /db_xref="GeneID:107922000"
ORIGIN      
        1 magqtqdqfe vyfrkadldg dgrisgaeav sffqgsglsk qvlaqiwaya dqshsgflsk
       61 qeffnalklv tvaqrreltp divkaalygp aaakipapqi nfpatsapqm gaavppssps
      121 vgfrgpgvpn agmsqqhfps qqnlsmrpqq tmpaatalhp sqgiaapess rggnivgqpq
      181 arpagstpls hqsmptgatg psltnqnmss nwlsgrpgga stgprgvaps taprpqaavs
      241 mssqptands kalvvsgngl asglafgsda fsatsftpkq elstqtfsph sapaspgitp
      301 vssgaqplvk snsldslqst fsmhsagsqs qrlysspiqg qpvsspsssf tpsgisagav
      361 naapnssqpp wpkmkqsdvq kytkvfmevd tdrdgkitge qarnlflswr lprevlkqvw
      421 dlsdqdsdsm lslrefcfal ylmeryregr plppalprnv lfdetllsmt gqpnvsygna
      481 argpnpgfgh qsgmaaqtvt psagvkppvr pnasadtttm snqqkprepv lddsfgtqpn
      541 nngqnlenga aedvmadgkk vdgtekvild sreklefyre kmqelvlyks rcdnrlneit
      601 eraiadkrea emlakkyeek ykqvaeiask ltveeakfre iqerktelhh aivnmeqggs
      661 adgilqvrad riqsdleelm kalterckkh gydvksaavi elptgwqpgv segaalwdee
      721 wdkfedegfg neltidvkkg avsqrgkasp dgsltpdsts yadektanlf sasdraiese
      781 saythsedes arsprgsptd rnslespskp fsddpfgkst eaeaerhqsf desgwgtfdn
      841 ddmdsvwgfn slntkdsdka rdffgssdfd vhtrtespna esfydkkspf tfedsvpstp
      901 lskfgnspsr fseasrdqfd sfsrfdsfsm hdggfsqqpd rltrfdsins skdfgsgfsr
      961 fdsvnnsedf gsrfspqpet ltrfdsisss kdfghgfsfd dsdpfgssgp fkvssdqqsp
     1021 kkssdnwraf
//
LOCUS       XP_016707299            1029 aa            linear   PLN 06-AUG-2024
DEFINITION  epidermal growth factor receptor substrate 15 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707299
VERSION     XP_016707299.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851810.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1029
                     /product="epidermal growth factor receptor substrate 15
                     isoform X2"
                     /calculated_mol_wt=111425
     Region          9..75
                     /region_name="EH"
                     /note="Eps15 homology domain; found in proteins implicated
                     in endocytosis, vesicle transport, and signal
                     transduction. The alignment contains a pair of EF-hand
                     motifs, typically one of them is canonical and binds to
                     Ca2+, while the other may not bind to Ca2+. A...; cd00052"
                     /db_xref="CDD:238009"
     Site            order(15..17,24..28)
                     /site_type="active"
                     /note="pseudo EF-hand loop [active]"
                     /db_xref="CDD:238009"
     Site            order(33,43,47)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:238009"
     Site            order(51,53,55,62)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238009"
     Region          <96..403
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          370..461
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          <559..689
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     CDS             1..1029
                     /gene="LOC107922000"
                     /coded_by="XM_016851810.2:512..3601"
                     /db_xref="GeneID:107922000"
ORIGIN      
        1 magqtqdqfe vyfrkadldg dgrisgaeav sffqgsglsk qvlaqiwaya dqshsgflsk
       61 qeffnalklv tvaqrreltp divkaalygp aaakipapqi nfpatsapqm gaavppssps
      121 vgfrgpgvpn agmsqqhfps qqnlsmrpqq tmpaatalhp sqgiaapess rggnivgqpq
      181 arpagstpls hqsmptgatg psltnqnmss nwlsgrpgga stgprgvaps taprpqaavs
      241 mssqptands kalvvsgngl asglafgsda fsatsftpkq elstqtfsph sapaspgitp
      301 vssgaqplvk snsldslqst fsmhsagsqs qrlysspiqg qpvsspsssf tpsgisagav
      361 naapnssqpp wpkmkqsdvq kytkvfmevd tdrdgkitge qarnlflswr lprevlkqvw
      421 dlsdqdsdsm lslrefcfal ylmeryregr plppalprnv lfdetllsmt gqpnvsygna
      481 argpnpgfgh qsgmaaqtvt psagvkppvr pnasadtttm snqqkprepv lddsfgtqpn
      541 nngqnlenga aedvmadgkk vdgtekvild sreklefyre kmqelvlyks rcdnrlneit
      601 eraiadkrea emlakkyeek ykqvaeiask ltveeakfre iqerktelhh aivnmeqggs
      661 adgilqvrad riqsdleelm kalterckkh gydvksaavi elptgwqpgv segaalwdee
      721 wdkfedegfg neltidvkkg avsqrgkasp dgsltpdsts yadektanlf sasdraiese
      781 saythsedes arsprgsptd rnslespskp fsddpfgkst eaeaerhhfd esgwgtfdnd
      841 dmdsvwgfns lntkdsdkar dffgssdfdv htrtespnae sfydkkspft fedsvpstpl
      901 skfgnspsrf seasrdqfds fsrfdsfsmh dggfsqqpdr ltrfdsinss kdfgsgfsrf
      961 dsvnnsedfg srfspqpetl trfdsisssk dfghgfsfdd sdpfgssgpf kvssdqqspk
     1021 kssdnwraf
//
LOCUS       XP_016707300             920 aa            linear   PLN 06-AUG-2024
DEFINITION  actin cytoskeleton-regulatory complex protein pan1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016707300
VERSION     XP_016707300.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851811.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..920
                     /product="actin cytoskeleton-regulatory complex protein
                     pan1 isoform X3"
                     /calculated_mol_wt=99395
     Region          9..75
                     /region_name="EH"
                     /note="Eps15 homology domain; found in proteins implicated
                     in endocytosis, vesicle transport, and signal
                     transduction. The alignment contains a pair of EF-hand
                     motifs, typically one of them is canonical and binds to
                     Ca2+, while the other may not bind to Ca2+. A...; cd00052"
                     /db_xref="CDD:238009"
     Site            order(15..17,24..28)
                     /site_type="active"
                     /note="pseudo EF-hand loop [active]"
                     /db_xref="CDD:238009"
     Site            order(33,43,47)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:238009"
     Site            order(51,53,55,62)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238009"
     Region          <96..403
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          370..461
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          <559..689
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     CDS             1..920
                     /gene="LOC107922000"
                     /coded_by="XM_016851811.2:399..3161"
                     /db_xref="GeneID:107922000"
ORIGIN      
        1 magqtqdqfe vyfrkadldg dgrisgaeav sffqgsglsk qvlaqiwaya dqshsgflsk
       61 qeffnalklv tvaqrreltp divkaalygp aaakipapqi nfpatsapqm gaavppssps
      121 vgfrgpgvpn agmsqqhfps qqnlsmrpqq tmpaatalhp sqgiaapess rggnivgqpq
      181 arpagstpls hqsmptgatg psltnqnmss nwlsgrpgga stgprgvaps taprpqaavs
      241 mssqptands kalvvsgngl asglafgsda fsatsftpkq elstqtfsph sapaspgitp
      301 vssgaqplvk snsldslqst fsmhsagsqs qrlysspiqg qpvsspsssf tpsgisagav
      361 naapnssqpp wpkmkqsdvq kytkvfmevd tdrdgkitge qarnlflswr lprevlkqvw
      421 dlsdqdsdsm lslrefcfal ylmeryregr plppalprnv lfdetllsmt gqpnvsygna
      481 argpnpgfgh qsgmaaqtvt psagvkppvr pnasadtttm snqqkprepv lddsfgtqpn
      541 nngqnlenga aedvmadgkk vdgtekvild sreklefyre kmqelvlyks rcdnrlneit
      601 eraiadkrea emlakkyeek ykqvaeiask ltveeakfre iqerktelhh aivnmeqggs
      661 adgilqvrad riqsdleelm kalterckkh gydvksaavi elptgwqpgv segaalwdee
      721 wdkfedegfg neltidvkkg avsqrgkasp dgsltpdsts yadektanlf sasdraiese
      781 saythsedes arsprgsptd rnslespskp fsddpfgkst eaeaerhqtr trpetfldqv
      841 ilmytqeqnp qmqkafmirr vhlhlktrfp vlhspslgtr hqgsvrhqgi sltvsqglip
      901 sacmmvdfhs nriglqdltp
//
LOCUS       XP_016706392             215 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 115 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706392
VERSION     XP_016706392.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850903.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="coiled-coil domain-containing protein 115
                     isoform X1"
                     /calculated_mol_wt=23832
     CDS             1..215
                     /gene="LOC107921047"
                     /coded_by="XM_016850903.2:121..768"
                     /db_xref="GeneID:107921047"
ORIGIN      
        1 mevvdhetps lengktdkev eenanvlqfm dsmdayltli hslsstlrrg wlelasarhs
       61 mgasrvntvl ldhtshpaat sllvtqdegk vdsgkphftl ckwasssnen sllgekqssq
      121 dklhpqlrhr gstelyeekt ssenkasrev ddpvqkersk slsmfgtlvs pklraaqlsf
      181 eaaletlvei anmrsemvct fdqvnmklag rkdek
//
LOCUS       XP_016706393             182 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 115 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706393
VERSION     XP_016706393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850904.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="coiled-coil domain-containing protein 115
                     isoform X2"
                     /calculated_mol_wt=20144
     CDS             1..182
                     /gene="LOC107921047"
                     /coded_by="XM_016850904.2:121..669"
                     /db_xref="GeneID:107921047"
ORIGIN      
        1 mevvdhetps lengktdkev eenanvlqfm dsmdayltli hslsstlrrg wlelasarhs
       61 mgasrvntvl ldhtshpaat sllvtqdegk vdsgkphftl ckwasssnen sllgekqssq
      121 dklhpqlrhr gstelyeekt ssenkasrev ddpvqkersk slsmfgtlvs pklraaqlsf
      181 eh
//
LOCUS       XP_016706194             421 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706194
VERSION     XP_016706194.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850705.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46376
     Region          273..>417
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     CDS             1..421
                     /gene="LOC107920886"
                     /coded_by="XM_016850705.2:16..1281"
                     /db_xref="GeneID:107920886"
ORIGIN      
        1 mrkgnlpknk kgrkvfpktl npwknisvsd svqipsfplr spqntgqttn sfncyispdp
       61 dremgstlea kslrkavvpp tllenpspgn lqstrlalhv nedssscwvy iasgcniyrl
      121 qipledswls tgkegllipe tkevieslll krcphrseiq sivlteiest gylvlasvda
      181 yghlivskld asgkdvdkit ysvlprdfgv gegswsgvcf spiqwsmaav arsfcksvdv
      241 ydqdihlrtl rtlwypssls fmrnlghgne ssilavtegc qlsvwdlrik enggclnric
      301 gsagdifyav cssstgniav ggadrtvtiy dprrwsaisr wvhcskyeit glafssldpd
      361 yifvqgvdye vfcgqwqess kvfsfrgdsn wlgfskcsnr dilggwcdsg sifvvdviak
      421 g
//
LOCUS       XP_040943064             268 aa            linear   PLN 06-AUG-2024
DEFINITION  transport and Golgi organization 2 homolog [Gossypium hirsutum].
ACCESSION   XP_040943064
VERSION     XP_040943064.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087130.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..268
                     /product="transport and Golgi organization 2 homolog"
                     /calculated_mol_wt=30084
     Region          1..251
                     /region_name="TANGO2"
                     /note="Transport and Golgi organization 2; pfam05742"
                     /db_xref="CDD:461729"
     CDS             1..268
                     /gene="LOC121213868"
                     /coded_by="XM_041087130.1:226..1032"
                     /db_xref="GeneID:121213868"
ORIGIN      
        1 mciaafiwqa hplypllllq nrdeyhnrpt kalawwdvdg ceilggrdev aggtwlacsr
       61 qgrvafltnv lelhprpdak trgdlpllfl estkspmefa eqlatdahqy ngfnlivadi
      121 psksmvyisn rpkgepiniq qvspglhvls nakldspwhk aqrlgkgfkq mlnrygknev
      181 nvkemveklm kdkvkadksk lpgicaldme fnlssifvem dtplglygtr staamtvgag
      241 gevsfydkyl ekgvwfertv nyhiqklk
//
LOCUS       XP_016707571             268 aa            linear   PLN 06-AUG-2024
DEFINITION  transport and Golgi organization 2 homolog [Gossypium hirsutum].
ACCESSION   XP_016707571
VERSION     XP_016707571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852082.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..268
                     /product="transport and Golgi organization 2 homolog"
                     /calculated_mol_wt=30202
     Region          1..251
                     /region_name="TANGO2"
                     /note="Transport and Golgi organization 2; pfam05742"
                     /db_xref="CDD:461729"
     CDS             1..268
                     /gene="LOC107922188"
                     /coded_by="XM_016852082.2:795..1601"
                     /db_xref="GeneID:107922188"
ORIGIN      
        1 mciaafiwqa hplypllllq nrdeyhnrpt kpvawwdvdg ceilgdrdev aggtwlacsr
       61 qgrvacltnv lelphlpnak trgdlpilfl kstkspmefa qqlitdahqy kgfnliladi
      121 psksmvyasn rprgediniq qvspglhvls nanldspcpk alrlrksfkq mlnkygnnev
      181 mvkemveklm edkvkadksk lpgicalewe felssifvet dtplglcgtr stialtisag
      241 eevgfyekyl ekgewfekti nynlqkqi
//
LOCUS       XP_016707572             142 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 3 [Gossypium hirsutum].
ACCESSION   XP_016707572
VERSION     XP_016707572.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852083.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="high mobility group B protein 3"
                     /calculated_mol_wt=15607
     Region          36..96
                     /region_name="HMG-box_AtHMGB1-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 1 (HMGB1) and
                     similar proteins; cd22005"
                     /db_xref="CDD:438821"
     Site            order(36..37,39..43,46..47,54,67..68,71,74..75,82,86,89,
                     93,96)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438821"
     CDS             1..142
                     /gene="LOC107922191"
                     /coded_by="XM_016852083.2:398..826"
                     /db_xref="GeneID:107922191"
ORIGIN      
        1 mkggksksdt ksaklsvksk agkksgkaak dpnkpkrpas affvfmeefr eqykkdhpkn
       61 ksvaavgkag gdkwkslsea ekapyvakae krkveyeknm kaynkrqaeg pkdedvesdk
      121 svsevndedd deegsgdeed de
//
LOCUS       XP_016707147             279 aa            linear   PLN 06-AUG-2024
DEFINITION  transport and Golgi organization 2 homolog [Gossypium hirsutum].
ACCESSION   XP_016707147
VERSION     XP_016707147.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851658.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="transport and Golgi organization 2 homolog"
                     /calculated_mol_wt=31349
     Region          1..251
                     /region_name="TANGO2"
                     /note="Transport and Golgi organization 2; pfam05742"
                     /db_xref="CDD:461729"
     CDS             1..279
                     /gene="LOC107921815"
                     /coded_by="XM_016851658.2:107..946"
                     /db_xref="GeneID:107921815"
ORIGIN      
        1 mciaafiwqa hplypllllq nrdeyynrpt kalawwdvdg ceilggrdev aggtwlacsr
       61 qgrvafltnv lelhhlsgak trgdlpllfl kstkspmefa dqlltnahqy ngfnlivadi
      121 atksmvyisn rpkgepihiq qvspglhvls nakldspvpk alrlrksirq mmnkygknev
      181 nvkemieklm kdkvkadksk lpgicaldme fnlssifvem dtpqglcgtr staaltiras
      241 gevsfcdkyl ekgvwfekti nyhiqnetrd fsevklsml
//
LOCUS       XP_040943065             575 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase family 92 protein Os08g0121900 [Gossypium
            hirsutum].
ACCESSION   XP_040943065
VERSION     XP_040943065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087131.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..575
                     /product="glycosyltransferase family 92 protein
                     Os08g0121900"
                     /calculated_mol_wt=66092
     Region          294..504
                     /region_name="Glyco_transf_92"
                     /note="Glycosyltransferase family 92; pfam01697"
                     /db_xref="CDD:426386"
     CDS             1..575
                     /gene="LOC121213871"
                     /coded_by="XM_041087131.1:28..1755"
                     /db_xref="GeneID:121213871"
ORIGIN      
        1 mprkaptsif liflclllla fyslllsrsa islspthlrf rprnltpryd apdsfnhvir
       61 edinelthrt rlvtsiqcpv esvsvllpnw evlvlvshdt pltsnlgfgg fycffprnet
      121 spanfsgvlp ftsattfkct lpnrnrrlqp fhqpvltrfp emetnvisaa pvmprwdfla
      181 yecfstetdv vlfvkgvnnr qginkspeef rcvfgndikn avktpvtssk qevfrclhpn
      241 lmelsispst taaakrikvs ieinreklvv psvayytppr rhmpsnpnpt sllcattmvy
      301 nvakflrewv myyskigvdk filydngsdd dlervikeln eegdynieri fwvwpktqea
      361 gfshsavyak dsctwmmyvd vdefifspsw lknfsqpskt mlksllsiss ngsigqvsik
      421 cndfgpsdqk khpamgviqg yncrrqaeqr hksillleav dhsllnvihh fdlnnnhynw
      481 kelpleagvi nhykyqawpe fmtkfrrrvs afvadwrtrv npmskdrtpg lgfqpikpeg
      541 wenmfcdvkd drlklwtkkw fgsqtpqglk mawql
//
LOCUS       XP_016707474             393 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707474
VERSION     XP_016707474.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851985.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X1"
                     /calculated_mol_wt=43374
     Region          83..351
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,103,105,134,150..153,157,159,203,205,
                     207..208,210,221,224,242..245)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,103,105,134,150..153,157,203,205,207..208,
                     210,221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(87,157,159,203,205,207,224,242..245)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(220..227,238..245)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..393
                     /gene="LOC107922133"
                     /coded_by="XM_016851985.2:658..1839"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssvsgatkr kasldehkkg sdqgkgskgs
       61 garsftfrel atatrnfret nllgeggfgr vfkgrletge ivavkqlnhd glqghqefiv
      121 evlmlsllhh vnlvtligyc tagdqrllvy eympmgsled hlfdlepgqe plswnnriki
      181 avgaargiey lhckanppvi yrdlksanil ldndfnpkls dfglaklgpv gdnthvstrv
      241 mgtygycape yamsgkltlk sdiycfgvvl lelitgrkai dtskkhgeqn lvswsrpylk
      301 dqkkfsllvd plirgcyprr clnyaiaita mclneeanfr pligdivval eylasqsqnw
      361 spesrnvevc nasqsspmrs ekgtphqsns krg
//
LOCUS       XP_016707475             393 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707475
VERSION     XP_016707475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851986.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X1"
                     /calculated_mol_wt=43374
     Region          83..351
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,103,105,134,150..153,157,159,203,205,
                     207..208,210,221,224,242..245)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,103,105,134,150..153,157,203,205,207..208,
                     210,221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(87,157,159,203,205,207,224,242..245)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(220..227,238..245)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..393
                     /gene="LOC107922133"
                     /coded_by="XM_016851986.2:510..1691"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssvsgatkr kasldehkkg sdqgkgskgs
       61 garsftfrel atatrnfret nllgeggfgr vfkgrletge ivavkqlnhd glqghqefiv
      121 evlmlsllhh vnlvtligyc tagdqrllvy eympmgsled hlfdlepgqe plswnnriki
      181 avgaargiey lhckanppvi yrdlksanil ldndfnpkls dfglaklgpv gdnthvstrv
      241 mgtygycape yamsgkltlk sdiycfgvvl lelitgrkai dtskkhgeqn lvswsrpylk
      301 dqkkfsllvd plirgcyprr clnyaiaita mclneeanfr pligdivval eylasqsqnw
      361 spesrnvevc nasqsspmrs ekgtphqsns krg
//
LOCUS       XP_040943066             393 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943066
VERSION     XP_040943066.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087132.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X1"
                     /calculated_mol_wt=43374
     Region          83..351
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,103,105,134,150..153,157,159,203,205,
                     207..208,210,221,224,242..245)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,103,105,134,150..153,157,203,205,207..208,
                     210,221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(87,157,159,203,205,207,224,242..245)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(220..227,238..245)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..393
                     /gene="LOC107922133"
                     /coded_by="XM_041087132.1:765..1946"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssvsgatkr kasldehkkg sdqgkgskgs
       61 garsftfrel atatrnfret nllgeggfgr vfkgrletge ivavkqlnhd glqghqefiv
      121 evlmlsllhh vnlvtligyc tagdqrllvy eympmgsled hlfdlepgqe plswnnriki
      181 avgaargiey lhckanppvi yrdlksanil ldndfnpkls dfglaklgpv gdnthvstrv
      241 mgtygycape yamsgkltlk sdiycfgvvl lelitgrkai dtskkhgeqn lvswsrpylk
      301 dqkkfsllvd plirgcyprr clnyaiaita mclneeanfr pligdivval eylasqsqnw
      361 spesrnvevc nasqsspmrs ekgtphqsns krg
//
LOCUS       XP_040943067             385 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943067
VERSION     XP_040943067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087133.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..385
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X2"
                     /calculated_mol_wt=42546
     Region          75..343
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(75..79,83,95,97,126,142..145,149,151,195,197,
                     199..200,202,213,216,234..237)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(75..79,83,95,97,126,142..145,149,195,197,199..200,
                     202,213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(79,149,151,195,197,199,216,234..237)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(212..219,230..237)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..385
                     /gene="LOC107922133"
                     /coded_by="XM_041087133.1:658..1815"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssasldehk kgsdqgkgsk gsgarsftfr
       61 elatatrnfr etnllgeggf grvfkgrlet geivavkqln hdglqghqef ivevlmlsll
      121 hhvnlvtlig yctagdqrll vyeympmgsl edhlfdlepg qeplswnnri kiavgaargi
      181 eylhckanpp viyrdlksan illdndfnpk lsdfglaklg pvgdnthvst rvmgtygyca
      241 peyamsgklt lksdiycfgv vllelitgrk aidtskkhge qnlvswsrpy lkdqkkfsll
      301 vdplirgcyp rrclnyaiai tamclneean frpligdivv aleylasqsq nwspesrnve
      361 vcnasqsspm rsekgtphqs nskrg
//
LOCUS       XP_016707476             381 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016707476
VERSION     XP_016707476.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851987.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X3"
                     /calculated_mol_wt=42159
     Region          71..339
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(71..75,79,91,93,122,138..141,145,147,191,193,
                     195..196,198,209,212,230..233)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(71..75,79,91,93,122,138..141,145,191,193,195..196,
                     198,209)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(75,145,147,191,193,195,212,230..233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(208..215,226..233)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..381
                     /gene="LOC107922133"
                     /coded_by="XM_016851987.2:781..1926"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssehkkgsd qgkgskgsga rsftfrelat
       61 atrnfretnl lgeggfgrvf kgrletgeiv avkqlnhdgl qghqefivev lmlsllhhvn
      121 lvtligycta gdqrllvyey mpmgsledhl fdlepgqepl swnnrikiav gaargieylh
      181 ckanppviyr dlksanilld ndfnpklsdf glaklgpvgd nthvstrvmg tygycapeya
      241 msgkltlksd iycfgvvlle litgrkaidt skkhgeqnlv swsrpylkdq kkfsllvdpl
      301 irgcyprrcl nyaiaitamc lneeanfrpl igdivvaley lasqsqnwsp esrnvevcna
      361 sqsspmrsek gtphqsnskr g
//
LOCUS       XP_040943068             381 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943068
VERSION     XP_040943068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087134.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X3"
                     /calculated_mol_wt=42159
     Region          71..339
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(71..75,79,91,93,122,138..141,145,147,191,193,
                     195..196,198,209,212,230..233)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(71..75,79,91,93,122,138..141,145,191,193,195..196,
                     198,209)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(75,145,147,191,193,195,212,230..233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(208..215,226..233)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..381
                     /gene="LOC107922133"
                     /coded_by="XM_041087134.1:508..1653"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssehkkgsd qgkgskgsga rsftfrelat
       61 atrnfretnl lgeggfgrvf kgrletgeiv avkqlnhdgl qghqefivev lmlsllhhvn
      121 lvtligycta gdqrllvyey mpmgsledhl fdlepgqepl swnnrikiav gaargieylh
      181 ckanppviyr dlksanilld ndfnpklsdf glaklgpvgd nthvstrvmg tygycapeya
      241 msgkltlksd iycfgvvlle litgrkaidt skkhgeqnlv swsrpylkdq kkfsllvdpl
      301 irgcyprrcl nyaiaitamc lneeanfrpl igdivvaley lasqsqnwsp esrnvevcna
      361 sqsspmrsek gtphqsnskr g
//
LOCUS       XP_040943069             381 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL21 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943069
VERSION     XP_040943069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087135.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="probable serine/threonine-protein kinase PBL21
                     isoform X3"
                     /calculated_mol_wt=42159
     Region          71..339
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(71..75,79,91,93,122,138..141,145,147,191,193,
                     195..196,198,209,212,230..233)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(71..75,79,91,93,122,138..141,145,191,193,195..196,
                     198,209)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(75,145,147,191,193,195,212,230..233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(208..215,226..233)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..381
                     /gene="LOC107922133"
                     /coded_by="XM_041087135.1:765..1910"
                     /db_xref="GeneID:107922133"
ORIGIN      
        1 mscfpclnpr skdvrididn gsrtnsrhsa dssehkkgsd qgkgskgsga rsftfrelat
       61 atrnfretnl lgeggfgrvf kgrletgeiv avkqlnhdgl qghqefivev lmlsllhhvn
      121 lvtligycta gdqrllvyey mpmgsledhl fdlepgqepl swnnrikiav gaargieylh
      181 ckanppviyr dlksanilld ndfnpklsdf glaklgpvgd nthvstrvmg tygycapeya
      241 msgkltlksd iycfgvvlle litgrkaidt skkhgeqnlv swsrpylkdq kkfsllvdpl
      301 irgcyprrcl nyaiaitamc lneeanfrpl igdivvaley lasqsqnwsp esrnvevcna
      361 sqsspmrsek gtphqsnskr g
//
LOCUS       XP_040943071             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943071
VERSION     XP_040943071.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087137.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13530
     Region          10..>86
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..117
                     /gene="LOC121213872"
                     /coded_by="XM_041087137.1:23..376"
                     /db_xref="GeneID:121213872"
ORIGIN      
        1 mhfaffsipy igrkceptqn imaacdfnmc fifafpgweg tthdiriflq alrkqelkfp
       61 hpppgkyylv dsgypqmagf lgpyrgnnii ylifveviik ylekkkslim pilryal
//
LOCUS       XP_016707676            1287 aa            linear   PLN 06-AUG-2024
DEFINITION  NPC intracellular cholesterol transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016707676
VERSION     XP_016707676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852187.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1287
                     /product="NPC intracellular cholesterol transporter 1"
                     /calculated_mol_wt=141382
     Region          44..1266
                     /region_name="2A060601"
                     /note="Niemann-Pick C type protein family; TIGR00917"
                     /db_xref="CDD:273337"
     CDS             1..1287
                     /gene="LOC107922255"
                     /coded_by="XM_016852187.2:131..3994"
                     /db_xref="GeneID:107922255"
ORIGIN      
        1 mhfsrrrtgf llsialfqvl livqvavaqt snderrqrhs egycamydic gersdgkvvn
       61 cpygspavkp dellsskiqs lcptitgnvc ctkaqfdtlq sqvqqaipfl vgcpaclrnf
      121 lnlfceltcs pnqslfinvt siskiknnst vdgidffitd dfgeglyesc kdvkfgtmnt
      181 ralefigaga knfkewfafi grrapnnmpg spyaiqflpt vpessgmkpm nvstyscrdv
      241 slgcscgdcp sspvcsntai stsnkaatcs vqigslkakc vdlalailyi vlvsmffgwg
      301 vfhqtrkrsr sfrmkpftda aeggeshsls rqkadnlpmq rledanqsst gvqlsvvqgy
      361 msdfyrkygl wvarhptlvl slsvgmvlvl clglvrfkve trpeklwvgp gskaaeekrf
      421 fdsnlapfyr ieqlilatip dvlngkspsi vteenikllf eiqkkidgir anysgsmisl
      481 tdicmkpmge dcatqsviqy fkmdpnydad drlehvnycf qhytsaescm safkapvdps
      541 tvlggfsgsn yteasafivt ypvnnaldke gnetqkavaw ekafvqlakd ellpmvqsrn
      601 ltfsfssess ieeelkrest adaitilisy lvmfayislt lgdtprlssf yisskvllgl
      661 sgvllvmlsv lgsvgffsai gvkstliime vipflvlavg vdnmcilvhs vkrqpldlpl
      721 egrisnalve vgpsitlasl sevfvfavgs fipmpacrvf smfaalavll dfllqvtafv
      781 slivfdflra egrrvdcfpc ikasstyaes ekgiggrkpg llaqymkevh apilnlwgvk
      841 iivvavfvaf alasialstr iepgleqkiv lpqdsylqgy fnnvseylri gpplyfvvkn
      901 ynyssesidt nklcsisqcn sdsllneiar asltpessyi akpaaswldd flvwlspeaf
      961 gccrkftngs ycppddqppc cspndtacgl sevckdcttc frhsdlhndr pstaqfrekl
     1021 pwfldalpsa dcskgghgay tssvevtgye sgiikassfr tyhtplnkqi dyvnsmraar
     1081 kfasrvsdsl kmeifpysvf ymffeqyldi wktalinlai aigavfivcl vitcslwtsa
     1141 iillvlamil vdlmgvmail giqlnavsvv nlvmsvgivv efcvhithaf svssgnrner
     1201 vkealgtmga svfsgitltk lvgvlvlcfs ktevfvvyyf qmylalvllg flhglvflpv
     1261 vlsmvgplsr ciqvekqder psvssqp
//
LOCUS       XP_040943072             906 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP4 [Gossypium hirsutum].
ACCESSION   XP_040943072
VERSION     XP_040943072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087138.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..906
                     /product="protein NLP4"
                     /calculated_mol_wt=100699
     Region          590..638
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          812..891
                     /region_name="PB1_NLP"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; cd06407"
                     /db_xref="CDD:99728"
     CDS             1..906
                     /gene="LOC107922567"
                     /coded_by="XM_041087138.1:637..3357"
                     /db_xref="GeneID:107922567"
ORIGIN      
        1 mdfdymdell ldgcwlettq gsdflnptlp fsnnffdpaf twptsesnag dlggglshqg
       61 enqrsllsgn shwneaqges lvsphfsqsh sldsdcvtdg sepnrrwwig prvnsgpats
      121 vmqrliqalg yikafgkekd vlvqlwlpvn rggrrfltts eqpfsldpns qklasyrnis
      181 vkydfpaeed skdiaglpgr vflskvpewt pdvrffkrde yprvghaqeh dvrgtfalpv
      241 feqgsgtclg vievvmttek ikiqpelesv ckaleavnlr ssitsrtqni kaysncyqaa
      301 lpeikellrc acethrlpla qawvpciqqg kegcrhssen yvhcvstvdd acciadpsiq
      361 gfheacsehh llkgqgvigr afmtnqpcfs tditsfkkte yplahhammf nlhaavalrf
      421 rsihtgkadf vlefflpahc rdpegqrkml nslsiiiqqv ccslrvvtdk elveetdlav
      481 sevvapsdgl pireesskrq ctnhhskkls gessscltkv qkssntalvl ekekprpmld
      541 eklpeveqhq qhislqesve cgdstfneis fssvtmgkts ekrrskaekt itlqvlrqyf
      601 agslkdaaks lgvcpttlkr icrqhgikrw psrkikkvgh slqklqhvid svqgasgafh
      661 isnfyanfpe laspkllgns alstsplndk pkqiniqpeg gdflsqaals nspssscsqs
      721 sssshscssg thrpsnfnms gkedhiigdn sgdgelkrvk sdvelhassq egpklfprsq
      781 slrslkeqli cdnlqpiskn tspiahdlea qrvkvtygde kirlrmqskw rfkdllheia
      841 rrfniddisr fdlkylddds ewvlltcdad mvecidvcgs sqgntiklsl rvshhhldqf
      901 sgstgs
//
LOCUS       XP_040943073             906 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP4 [Gossypium hirsutum].
ACCESSION   XP_040943073
VERSION     XP_040943073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087139.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..906
                     /product="protein NLP4"
                     /calculated_mol_wt=100699
     Region          590..638
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          812..891
                     /region_name="PB1_NLP"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; cd06407"
                     /db_xref="CDD:99728"
     CDS             1..906
                     /gene="LOC107922567"
                     /coded_by="XM_041087139.1:1058..3778"
                     /db_xref="GeneID:107922567"
ORIGIN      
        1 mdfdymdell ldgcwlettq gsdflnptlp fsnnffdpaf twptsesnag dlggglshqg
       61 enqrsllsgn shwneaqges lvsphfsqsh sldsdcvtdg sepnrrwwig prvnsgpats
      121 vmqrliqalg yikafgkekd vlvqlwlpvn rggrrfltts eqpfsldpns qklasyrnis
      181 vkydfpaeed skdiaglpgr vflskvpewt pdvrffkrde yprvghaqeh dvrgtfalpv
      241 feqgsgtclg vievvmttek ikiqpelesv ckaleavnlr ssitsrtqni kaysncyqaa
      301 lpeikellrc acethrlpla qawvpciqqg kegcrhssen yvhcvstvdd acciadpsiq
      361 gfheacsehh llkgqgvigr afmtnqpcfs tditsfkkte yplahhammf nlhaavalrf
      421 rsihtgkadf vlefflpahc rdpegqrkml nslsiiiqqv ccslrvvtdk elveetdlav
      481 sevvapsdgl pireesskrq ctnhhskkls gessscltkv qkssntalvl ekekprpmld
      541 eklpeveqhq qhislqesve cgdstfneis fssvtmgkts ekrrskaekt itlqvlrqyf
      601 agslkdaaks lgvcpttlkr icrqhgikrw psrkikkvgh slqklqhvid svqgasgafh
      661 isnfyanfpe laspkllgns alstsplndk pkqiniqpeg gdflsqaals nspssscsqs
      721 sssshscssg thrpsnfnms gkedhiigdn sgdgelkrvk sdvelhassq egpklfprsq
      781 slrslkeqli cdnlqpiskn tspiahdlea qrvkvtygde kirlrmqskw rfkdllheia
      841 rrfniddisr fdlkylddds ewvlltcdad mvecidvcgs sqgntiklsl rvshhhldqf
      901 sgstgs
//
LOCUS       XP_040943075             269 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 4-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943075
VERSION     XP_040943075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087141.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="FT-interacting protein 4-like isoform X1"
                     /calculated_mol_wt=31174
     Region          113..269
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..269
                     /gene="LOC121213874"
                     /coded_by="XM_041087141.1:328..1137"
                     /db_xref="GeneID:121213874"
ORIGIN      
        1 mnpllpqlhh iyllliyqld ilrkqavril csslsrnepp lrqevvgyml drgsqmwslr
       61 kakanfqrvl atfkcfsnar qwfdeirkwn nsaatvlvma iyciivfkpd lilptmtlys
      121 iqvrilqwrk rprhpthidv nlsvagsvta deldeefdtf pssrqfdvlr mrydrlssia
      181 grvvtvisdi atqverfhpl lnlrdpritv mflvcclvgp fmlyylislk vllifggfyv
      241 mrppflgkdv lnapqnffsk lptkadyml
//
LOCUS       XP_040943076             221 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 4-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943076
VERSION     XP_040943076.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087142.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="FT-interacting protein 4-like isoform X2"
                     /calculated_mol_wt=25536
     Region          65..221
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..221
                     /gene="LOC121213874"
                     /coded_by="XM_041087142.1:262..927"
                     /db_xref="GeneID:121213874"
ORIGIN      
        1 mldrgsqmws lrkakanfqr vlatfkcfsn arqwfdeirk wnnsaatvlv maiyciivfk
       61 pdlilptmtl ysiqvrilqw rkrprhpthi dvnlsvagsv tadeldeefd tfpssrqfdv
      121 lrmrydrlss iagrvvtvis diatqverfh pllnlrdpri tvmflvcclv gpfmlyylis
      181 lkvllifggf yvmrppflgk dvlnapqnff sklptkadym l
//
LOCUS       XP_040943077             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943077
VERSION     XP_040943077.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087143.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087143.1:1320..2816"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943078             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943078
VERSION     XP_040943078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087144.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087144.1:1356..2852"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943079             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943079
VERSION     XP_040943079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087145.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087145.1:1191..2687"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943080             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943080
VERSION     XP_040943080.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087146.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087146.1:1369..2865"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943081             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943081
VERSION     XP_040943081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087147.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087147.1:1640..3136"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943082             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943082
VERSION     XP_040943082.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087148.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087148.1:2206..3702"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943083             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943083
VERSION     XP_040943083.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087149.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087149.1:1636..3132"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943085             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943085
VERSION     XP_040943085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087151.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087151.1:1547..3043"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943086             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943086
VERSION     XP_040943086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087152.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087152.1:1543..3039"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943087             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943087
VERSION     XP_040943087.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087153.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087153.1:1452..2948"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943088             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943088
VERSION     XP_040943088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087154.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087154.1:1415..2911"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943089             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943089
VERSION     XP_040943089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087155.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087155.1:1449..2945"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943090             498 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943090
VERSION     XP_040943090.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087156.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=56747
     Region          3..124
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(20,66,68,74)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          161..310
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(176,182,230,232,238)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          322..449
                     /region_name="C2D_MCTP_PRT_plant"
                     /note="C2 domain fourth repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08379"
                     /db_xref="CDD:176025"
     Site            order(340,346,392,394,407)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176025"
     CDS             1..498
                     /gene="LOC107921767"
                     /coded_by="XM_041087156.1:1324..2820"
                     /db_xref="GeneID:107921767"
ORIGIN      
        1 meflfvrivr ardlplkavn gveikignyn attknfekkp dfewnqvfaf gqdrlqattm
       61 eitmrdkeli igdnmigkit valhevplcl ppdsplasqw ykledkngft lrkgelmlam
      121 wystqadrvf tdawhsdsai vsgesllntr lkayllprlw ylrvnviqar dlvpgskdrn
      181 pqvyvkavvg dvilrtrvsp dknvnpqwne dlmfvvakpf fdslivtved rlenstircl
      241 gkcvirlsnv eqrllplpad plwytlediv fedgmekevn ffsklnmcvs ldggyhgfde
      301 svhngsdyrp takmlwtami gvlelgiina sglqpiklrd gcettdaycl akygpkwvkt
      361 rtvvdsfdpk wneqyswdvy dlytmltigv fddchlhggd avgdgkdpsl ekvriqlssl
      421 atnkiytysy pllvlqpnga kkmgelqlai rftcssylsl flvytmnpll pemhhiypls
      481 iyqldilrkq avrilvrv
//
LOCUS       XP_040943092             300 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 [Gossypium hirsutum].
ACCESSION   XP_040943092
VERSION     XP_040943092.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087158.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..300
                     /product="exosome complex component RRP43"
                     /calculated_mol_wt=32148
     Region          20..290
                     /region_name="RNase_PH_RRP43"
                     /note="RRP43 subunit of eukaryotic exosome; cd11369"
                     /db_xref="CDD:206774"
     Site            order(58,60,75,77..79,94,96,101,118,121,125,147,152,157,
                     175..177,216,255..266,272,276)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:206774"
     CDS             1..300
                     /gene="LOC107921769"
                     /coded_by="XM_041087158.1:280..1182"
                     /db_xref="GeneID:107921769"
ORIGIN      
        1 mglpnasgdl stevevdafr rlfplrfyek hllesirpda rplgrarett ialgavasan
       61 gsalakigst tmlaaikmev mtpsletpde gciaidfhmp picspivrpg rpaeaapvva
      121 kqlsdtilss gminlkelsl vsgkaawmay ldiycldadg alfdtallsa vaafshleip
      181 vvslnddgki vlseeqglsd repvnkekrk inlssvpfsl tcvlyknyil adptaeeesi
      241 mdtivtvvld sssqlvslqk pggtvlayts aiqdcialtr qrvkelqkil eeaisgmevd
//
LOCUS       XP_040943093             300 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 [Gossypium hirsutum].
ACCESSION   XP_040943093
VERSION     XP_040943093.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087159.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..300
                     /product="exosome complex component RRP43"
                     /calculated_mol_wt=32148
     Region          20..290
                     /region_name="RNase_PH_RRP43"
                     /note="RRP43 subunit of eukaryotic exosome; cd11369"
                     /db_xref="CDD:206774"
     Site            order(58,60,75,77..79,94,96,101,118,121,125,147,152,157,
                     175..177,216,255..266,272,276)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:206774"
     CDS             1..300
                     /gene="LOC107921769"
                     /coded_by="XM_041087159.1:580..1482"
                     /db_xref="GeneID:107921769"
ORIGIN      
        1 mglpnasgdl stevevdafr rlfplrfyek hllesirpda rplgrarett ialgavasan
       61 gsalakigst tmlaaikmev mtpsletpde gciaidfhmp picspivrpg rpaeaapvva
      121 kqlsdtilss gminlkelsl vsgkaawmay ldiycldadg alfdtallsa vaafshleip
      181 vvslnddgki vlseeqglsd repvnkekrk inlssvpfsl tcvlyknyil adptaeeesi
      241 mdtivtvvld sssqlvslqk pggtvlayts aiqdcialtr qrvkelqkil eeaisgmevd
//
LOCUS       XP_040943094             269 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943094
VERSION     XP_040943094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087160.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="FT-interacting protein 4 isoform X1"
                     /calculated_mol_wt=31197
     Region          113..269
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..269
                     /gene="LOC107921770"
                     /coded_by="XM_041087160.1:874..1683"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 mnpllpqlhh iyllliyqld flrkqavril csslsrnepp lrqevvgyml drgsqmwslr
       61 kakanfqrvl atfkcfsnar qwfdeirkwn nsaatvlvma iyciivfkpd lilptmtlys
      121 iqvrilqwrk rprhpthidv nlsvagsvta dkldeefdtf pssrqfdvlr mrydrlssia
      181 grvvtvisdi atqverfhsl lnlrdpritv mflvcclvgp fmlyylislk vllifggfyv
      241 mrppflgkdv lnapqnffsk lptkadyml
//
LOCUS       XP_040943095             269 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943095
VERSION     XP_040943095.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087161.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="FT-interacting protein 4 isoform X1"
                     /calculated_mol_wt=31197
     Region          113..269
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..269
                     /gene="LOC107921770"
                     /coded_by="XM_041087161.1:780..1589"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 mnpllpqlhh iyllliyqld flrkqavril csslsrnepp lrqevvgyml drgsqmwslr
       61 kakanfqrvl atfkcfsnar qwfdeirkwn nsaatvlvma iyciivfkpd lilptmtlys
      121 iqvrilqwrk rprhpthidv nlsvagsvta dkldeefdtf pssrqfdvlr mrydrlssia
      181 grvvtvisdi atqverfhsl lnlrdpritv mflvcclvgp fmlyylislk vllifggfyv
      241 mrppflgkdv lnapqnffsk lptkadyml
//
LOCUS       XP_016707094             269 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707094
VERSION     XP_016707094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851605.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..269
                     /product="FT-interacting protein 4 isoform X1"
                     /calculated_mol_wt=31197
     Region          113..269
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..269
                     /gene="LOC107921770"
                     /coded_by="XM_016851605.2:841..1650"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 mnpllpqlhh iyllliyqld flrkqavril csslsrnepp lrqevvgyml drgsqmwslr
       61 kakanfqrvl atfkcfsnar qwfdeirkwn nsaatvlvma iyciivfkpd lilptmtlys
      121 iqvrilqwrk rprhpthidv nlsvagsvta dkldeefdtf pssrqfdvlr mrydrlssia
      181 grvvtvisdi atqverfhsl lnlrdpritv mflvcclvgp fmlyylislk vllifggfyv
      241 mrppflgkdv lnapqnffsk lptkadyml
//
LOCUS       XP_040943096             167 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943096
VERSION     XP_040943096.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087162.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="vacuolar-sorting receptor 4 isoform X2"
                     /calculated_mol_wt=18661
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..167
                     /gene="LOC107921770"
                     /coded_by="XM_041087162.1:263..766"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgdvetngcl ennggcwqdk
      121 tvnltacrik krrnqnwigg srkllisrsd pfvsvqgnkp fvffvrv
//
LOCUS       XP_040943097             139 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943097
VERSION     XP_040943097.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087163.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="vacuolar-sorting receptor 4 isoform X3"
                     /calculated_mol_wt=15269
     Region          52..>102
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..139
                     /gene="LOC107921770"
                     /coded_by="XM_041087163.1:231..650"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgvamaidva swssglaikl
      121 gkrsrkeeir igseevesc
//
LOCUS       XP_040943098             139 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943098
VERSION     XP_040943098.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087164.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="vacuolar-sorting receptor 4 isoform X3"
                     /calculated_mol_wt=15269
     Region          52..>102
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..139
                     /gene="LOC107921770"
                     /coded_by="XM_041087164.1:231..650"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgvamaidva swssglaikl
      121 gkrsrkeeir igseevesc
//
LOCUS       XP_040943100             132 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943100
VERSION     XP_040943100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087166.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..132
                     /product="vacuolar-sorting receptor 4 isoform X4"
                     /calculated_mol_wt=14644
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..132
                     /gene="LOC107921770"
                     /coded_by="XM_041087166.1:263..661"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgdvetngcl ennggcwqdk
      121 tvnltacrll wq
//
LOCUS       XP_040943101             120 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943101
VERSION     XP_040943101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087167.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="vacuolar-sorting receptor 4 isoform X5"
                     /calculated_mol_wt=13450
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..120
                     /gene="LOC107921770"
                     /coded_by="XM_041087167.1:229..591"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgdqekkkse ldrrkskvvd
//
LOCUS       XP_040943102             114 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943102
VERSION     XP_040943102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087168.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="vacuolar-sorting receptor 4 isoform X6"
                     /calculated_mol_wt=12639
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..114
                     /gene="LOC107921770"
                     /coded_by="XM_041087168.1:228..572"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgglndeefl ccfs
//
LOCUS       XP_040943103             106 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 4 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040943103
VERSION     XP_040943103.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087169.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="vacuolar-sorting receptor 4 isoform X7"
                     /calculated_mol_wt=11695
     Region          52..>106
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..106
                     /gene="LOC107921770"
                     /coded_by="XM_041087169.1:227..547"
                     /db_xref="GeneID:107921770"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rggplf
//
LOCUS       XP_016707095             236 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707095
VERSION     XP_016707095.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851606.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..236
                     /product="vacuolar-sorting receptor 3 isoform X1"
                     /calculated_mol_wt=25934
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..236
                     /gene="LOC107921771"
                     /coded_by="XM_016851606.2:826..1536"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgdvetnecl ennggcwqdk
      121 tvnltacrdt frgrvcecll vdgvqfkgdg yshcealapv gfgyafcgts cvangtslrd
      181 giqrclvsea lmetleethl tsssvfctvg fatmtrsrls sqgrmpanfs ffflly
//
LOCUS       XP_040943104             192 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943104
VERSION     XP_040943104.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087170.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..192
                     /product="exosome complex component RRP43 isoform X2"
                     /calculated_mol_wt=20395
     Region          20..>179
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,124,131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..192
                     /gene="LOC107921771"
                     /coded_by="XM_041087170.1:168..746"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gcigllplta rfpvslsllk tpgrpaegap
      121 vvakqlsdti lssgminlke lslvsgkaaw mayldiycld adgatfdtal lsavaafshs
      181 ivtrdswwkr ta
//
LOCUS       XP_040943105             192 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943105
VERSION     XP_040943105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087171.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..192
                     /product="exosome complex component RRP43 isoform X2"
                     /calculated_mol_wt=20395
     Region          20..>179
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,124,131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..192
                     /gene="LOC107921771"
                     /coded_by="XM_041087171.1:168..746"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gcigllplta rfpvslsllk tpgrpaegap
      121 vvakqlsdti lssgminlke lslvsgkaaw mayldiycld adgatfdtal lsavaafshs
      181 ivtrdswwkr ta
//
LOCUS       XP_040943106             192 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943106
VERSION     XP_040943106.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087172.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..192
                     /product="exosome complex component RRP43 isoform X2"
                     /calculated_mol_wt=20395
     Region          20..>179
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,124,131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..192
                     /gene="LOC107921771"
                     /coded_by="XM_041087172.1:168..746"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gcigllplta rfpvslsllk tpgrpaegap
      121 vvakqlsdti lssgminlke lslvsgkaaw mayldiycld adgatfdtal lsavaafshs
      181 ivtrdswwkr ta
//
LOCUS       XP_016707096             189 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707096
VERSION     XP_016707096.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851607.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="exosome complex component RRP43 isoform X3"
                     /calculated_mol_wt=20212
     Region          20..>176
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,121,128)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..189
                     /gene="LOC107921771"
                     /coded_by="XM_016851607.2:168..737"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gciaiyfhmp picspivrpg rpaegapvva
      121 kqlsdtilss gminlkelsl vsgkaawmay ldiycldadg atfdtallsa vaafshsivt
      181 rdswwkrta
//
LOCUS       XP_040943108             187 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943108
VERSION     XP_040943108.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087174.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..187
                     /product="exosome complex component RRP43 isoform X4"
                     /calculated_mol_wt=19886
     Region          20..>179
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,124,131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..187
                     /gene="LOC107921771"
                     /coded_by="XM_041087174.1:168..731"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gcigllplta rfpvslsllk tpgrpaegap
      121 vvakqlsdti lssgminlke lslvsgkaaw mayldiycld adgatfdtal lsavaafshy
      181 swwkrta
//
LOCUS       XP_040943109             184 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943109
VERSION     XP_040943109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087175.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="exosome complex component RRP43 isoform X5"
                     /calculated_mol_wt=19704
     Region          20..>176
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,121,128)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..184
                     /gene="LOC107921771"
                     /coded_by="XM_041087175.1:168..722"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gciaiyfhmp picspivrpg rpaegapvva
      121 kqlsdtilss gminlkelsl vsgkaawmay ldiycldadg atfdtallsa vaafshysww
      181 krta
//
LOCUS       XP_016707101             177 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016707101
VERSION     XP_016707101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851612.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="exosome complex component RRP43 isoform X6"
                     /calculated_mol_wt=18841
     Region          20..>164
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,109,116)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..177
                     /gene="LOC107921771"
                     /coded_by="XM_016851612.2:168..701"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlgaikmev mtpsletqde gcivvrpgrp aegapvvakq lsdtilssgm
      121 inlkelslvs gkaawmayld iycldadgat fdtallsava afshsivtrd swwkrta
//
LOCUS       XP_040943110             155 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component rrp43 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040943110
VERSION     XP_040943110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087176.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..155
                     /product="exosome complex component rrp43 isoform X7"
                     /calculated_mol_wt=16728
     Region          34..>142
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(55..57,87,94)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..155
                     /gene="LOC107921771"
                     /coded_by="XM_041087176.1:283..750"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mlvrleeqek pplalgllhl lmvqhlqklv qlqtmlgaik mevmtpslet qdegcigllp
       61 ltarfpvsls llktpgrpae gapvvakqls dtilssgmin lkelslvsgk aawmayldiy
      121 cldadgatfd tallsavaaf shsivtrdsw wkrta
//
LOCUS       XP_016707102             152 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component rrp43 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_016707102
VERSION     XP_016707102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851613.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..152
                     /product="exosome complex component rrp43 isoform X8"
                     /calculated_mol_wt=16546
     Region          34..>145
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(55..57,84,91)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..152
                     /gene="LOC107921771"
                     /coded_by="XM_016851613.2:283..741"
                     /db_xref="GeneID:107921771"
ORIGIN      
        1 mlvrleeqek pplalgllhl lmvqhlqklv qlqtmlgaik mevmtpslet qdegciaiyf
       61 hmppicspiv rpgrpaegap vvakqlsdti lssgminlke lslvsgkaaw mayldiycld
      121 adgatfdtal lsavaafshs ivtrdswwkr ta
//
LOCUS       XP_016707103             215 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707103
VERSION     XP_016707103.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851614.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="vacuolar-sorting receptor 3 isoform X1"
                     /calculated_mol_wt=23351
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..215
                     /gene="LOC107921773"
                     /coded_by="XM_016851614.2:832..1479"
                     /db_xref="GeneID:107921773"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgdvetnecl ennggcwqdk
      121 tanltacrdt frgrvcecll vdgvqfkgdg yshcealgpg gfgyafcgtt cvangtflgd
      181 ciqrclpsea lvetqekihl tsssvfcnvg faami
//
LOCUS       XP_016707104             198 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707104
VERSION     XP_016707104.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851615.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..198
                     /product="vacuolar-sorting receptor 3 isoform X2"
                     /calculated_mol_wt=21877
     Region          52..>103
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     CDS             1..198
                     /gene="LOC107921773"
                     /coded_by="XM_016851615.2:832..1428"
                     /db_xref="GeneID:107921773"
ORIGIN      
        1 melrtfhhhl lqvfmllsli sncyarfvve knsltvtspe kikgthdsai gnfgipqygg
       61 smagvvvype enqkacksfd dfwisfkskp gslptfvlvd rgdvetnecl ennggcwqdk
      121 tanltacrdt frgrvcecll vdgvqfkgdg yshcegpnvn llqhsarvdl gmrfvellas
      181 ptelslgivf nvacrqkh
//
LOCUS       XP_016707105             190 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707105
VERSION     XP_016707105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851616.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..190
                     /product="exosome complex component RRP43 isoform X3"
                     /calculated_mol_wt=20149
     Region          20..>180
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,124,131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..190
                     /gene="LOC107921773"
                     /coded_by="XM_016851616.2:104..676"
                     /db_xref="GeneID:107921773"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlaaikmev mtpsletpne gclgllplaa rfpvslslpk tpgrpaeaap
      121 vvakqlsdti lssgminlke lslvsgkaaw mayldiycyd adgalfdtal lsavaafshc
      181 ncfshfhqil
//
LOCUS       XP_016707106             181 aa            linear   PLN 06-AUG-2024
DEFINITION  exosome complex component RRP43 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016707106
VERSION     XP_016707106.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851617.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="exosome complex component RRP43 isoform X4"
                     /calculated_mol_wt=19129
     Region          20..>179
                     /region_name="RNase_PH"
                     /note="RNase PH-like 3'-5' exoribonucleases; cl03114"
                     /db_xref="CDD:446015"
     Site            order(92..94,124,131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:206766"
     CDS             1..181
                     /gene="LOC107921773"
                     /coded_by="XM_016851617.2:104..649"
                     /db_xref="GeneID:107921773"
ORIGIN      
        1 mglpnasddl stevevdafr rlfplrfyek hllksirpda rplgrarett iglgavasan
       61 gsalakigst tmlaaikmev mtpsletpne gclgllplaa rfpvslslpk tpgrpaeaap
      121 vvakqlsdti lssgminlke lslvsgkaaw mayldiycyd adgalfdtal lsavaafshy
      181 f
//
LOCUS       XP_040943112             208 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943112
VERSION     XP_040943112.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087178.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24710
     CDS             1..208
                     /gene="LOC107921774"
                     /coded_by="XM_041087178.1:120..746"
                     /db_xref="GeneID:107921774"
ORIGIN      
        1 mdefnnmyns fdmnydtpel seeaqrriat ivtqvennsy heeeeymlss vlvhhetyft
       61 mqprmdsnyt gqmwvdevlk ghddrcmnsf rmpkdifhsl lhdlqtnygl kngkvsvmkk
      121 lalslyilgn resnsnatew fqrsgetvsr iftdmlhifa rmgidttkpt egqfeevpnh
      181 irhdtrywph fkeniilwiq dihkwqvf
//
LOCUS       XP_040943113             140 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943113
VERSION     XP_040943113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087179.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..140
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15740
     CDS             1..140
                     /gene="LOC107921775"
                     /coded_by="XM_041087179.1:329..751"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mqwkcfvgls kefspirgss inrylqwksg kvwsksfsag ddscnscsel edgkshersg
       61 qetnqqmcny kyqleqedly lilmkhattw viqvkklqqq lqeetdlhla lasavehfgs
      121 psssspgklp dkqalhqglc
//
LOCUS       XP_016707110             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707110
VERSION     XP_016707110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851621.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15612
     CDS             1..139
                     /gene="LOC107921775"
                     /coded_by="XM_016851621.2:412..831"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mqwkcfvgls kefspirgss inrylqwksg kvwsksfsag ddscnscsel edgkshersg
       61 qetnqqmcny kyqleqedly lilmkhattw viqvkklqqq lqeetdlhla lasavehfgs
      121 psssspgklp dkalhqglc
//
LOCUS       XP_016707111             129 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707111
VERSION     XP_016707111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851622.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..129
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=14508
     CDS             1..129
                     /gene="LOC107921775"
                     /coded_by="XM_016851622.2:348..737"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mcrifrgssi nrylqwksgk vwsksfsagd dscnscsele dgkshersgq etnqqmcnyk
       61 yqleqedlyl ilmkhattwv iqvkklqqql qeetdlhlal asavehfgsp sssspgklpd
      121 kqalhqglc
//
LOCUS       XP_016707113             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707113
VERSION     XP_016707113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851624.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=13812
     Region          69..>101
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..124
                     /gene="LOC107921775"
                     /coded_by="XM_016851624.2:802..1176"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mqwkcfvgls kefspirgss inrylqwksg kvwsksfsag ddscnscsel edgkshersg
       61 qetnqqmcny kyqleqevkk lqqqlqeetd lhlalasave hfgspssssp gklpdkqalh
      121 qglc
//
LOCUS       XP_040943115             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943115
VERSION     XP_040943115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087181.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=13812
     Region          69..>101
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..124
                     /gene="LOC107921775"
                     /coded_by="XM_041087181.1:325..699"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mqwkcfvgls kefspirgss inrylqwksg kvwsksfsag ddscnscsel edgkshersg
       61 qetnqqmcny kyqleqevkk lqqqlqeetd lhlalasave hfgspssssp gklpdkqalh
      121 qglc
//
LOCUS       XP_016707112             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707112
VERSION     XP_016707112.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851623.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=13832
     CDS             1..124
                     /gene="LOC107921775"
                     /coded_by="XM_016851623.2:292..666"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mgssinrylq wksgkvwsks fsagddscns cseledgksh ersgqetnqq mcnykyqleq
       61 edlylilmkh attwviqvkk lqqqlqeetd lhlalasave hfgspssssp gklpdkqalh
      121 qglc
//
LOCUS       XP_016707114             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707114
VERSION     XP_016707114.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851625.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=13832
     CDS             1..124
                     /gene="LOC107921775"
                     /coded_by="XM_016851625.2:298..672"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mgssinrylq wksgkvwsks fsagddscns cseledgksh ersgqetnqq mcnykyqleq
       61 edlylilmkh attwviqvkk lqqqlqeetd lhlalasave hfgspssssp gklpdkqalh
      121 qglc
//
LOCUS       XP_016707115             113 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707115
VERSION     XP_016707115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851626.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=12581
     Region          58..>90
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..113
                     /gene="LOC107921775"
                     /coded_by="XM_016851626.2:344..685"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mcrifrgssi nrylqwksgk vwsksfsagd dscnscsele dgkshersgq etnqqmcnyk
       61 yqleqevkkl qqqlqeetdl hlalasaveh fgspsssspg klpdkqalhq glc
//
LOCUS       XP_016707117             108 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707117
VERSION     XP_016707117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="uncharacterized protein isoform X8"
                     /calculated_mol_wt=11905
     Region          53..>85
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..108
                     /gene="LOC107921775"
                     /coded_by="XM_016851628.2:311..637"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mgssinrylq wksgkvwsks fsagddscns cseledgksh ersgqetnqq mcnykyqleq
       61 evkklqqqlq eetdlhlala savehfgsps ssspgklpdk qalhqglc
//
LOCUS       XP_016707116             108 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707116
VERSION     XP_016707116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="uncharacterized protein isoform X9"
                     /calculated_mol_wt=11905
     Region          53..>85
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..108
                     /gene="LOC107921775"
                     /coded_by="XM_016851627.2:344..670"
                     /db_xref="GeneID:107921775"
ORIGIN      
        1 mgssinrylq wksgkvwsks fsagddscns cseledgksh ersgqetnqq mcnykyqleq
       61 evkklqqqlq eetdlhlala savehfgsps ssspgklpdk qalhqglc
//
LOCUS       XP_040943116             645 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 15 [Gossypium hirsutum].
ACCESSION   XP_040943116
VERSION     XP_040943116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087182.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..645
                     /product="U-box domain-containing protein 15"
                     /calculated_mol_wt=72274
     Region          30..162
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          <217..354
                     /region_name="UFD2"
                     /note="Ubiquitin fusion degradation protein 2
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5113"
                     /db_xref="CDD:227444"
     Region          272..324
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(273,276,278..281,300,304,313)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          <363..>596
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          365..390
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          407..432
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(423,427,431,464,468,472,505,509,513)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          439..475
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          480..514
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          525..555
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..645
                     /gene="LOC107921183"
                     /coded_by="XM_041087182.1:236..2173"
                     /db_xref="GeneID:107921183"
ORIGIN      
        1 mvmdvgerdg dgedggweni gedngtkspt dlvdetvsmi eyvarfgdyr raqrkecynl
       61 arrmkillpf fdeirhhgsp ishncvasls rlkkairlam kllktcnegs kihlalesea
      121 imikfhnayv kltqaleelp fdelevsdev reqielmltq ltrakkrtdt qdielavdlm
      181 avssktdern adiaiverla kkldlhtved lkietiavkk lskergstae siqqiiqlln
      241 kfkqvlgmei tnvlddtdtp qklskchslv ipheflcpit leimrdpviv asgqtferes
      301 iqkwfdsnhr tcpktrqtla hlsvapnyal knlitqwcek nnfhlpkked qassrkffvd
      361 hedeisclve qlsssqlevq rkavknirvl skenpetrvl iakhgaiprl vkllsypdsk
      421 iqehavtall nlsidesnkr litdehaipa iievlqngsm eskensaaal fslsmldenk
      481 vtialengip plvdllqdgt irgkrdavta lfslslnqln kvraieagiv pplmllledk
      541 klgmvdeals illllathae grhemgqlsf iqtlvdiikd gtpknkecat svllelssnn
      601 yshilaalqf gvyehlveia esgtnraqrk angllqlmsk seqip
//
LOCUS       XP_040943117             452 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943117
VERSION     XP_040943117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087183.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..452
                     /product="G2/mitotic-specific cyclin-2 isoform X1"
                     /calculated_mol_wt=51368
     Region          148..322
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(167..168,171..172,175..176,179,252..253,256..260,
                     263..265,282,313..314,317..318,321..322)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          327..443
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..452
                     /gene="LOC121213875"
                     /coded_by="XM_041087183.1:353..1711"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqevgl ragargkfar atgqnrrals ivnrdvvgap pfpcavkkrp
       61 lsqrnavsnk ipsthvhrpi trkfaadmas kqqmkpevpn esddftiidl ddpkesndte
      121 vpmferhvea mleeidrmee vemediaegp fldidngdkk nplavveyid dlykfyrkae
      181 ctgcvppnym aqqhdinekm railidwlie vhykfelmee tlyltvnvid rfltvhqvvr
      241 kklqlvgita mllackyeev svpvvedlil isdkaysrke vldmvcdstl clinilrsir
      301 kkgdtyihld lqeklmintl qfnlssptpy vfmrrflkaa qsnkklells ffmielclve
      361 yemlkfppsl laaaaiftaq ctiggfkhws ktcewytnyk eeqlvdcsrm mvtfhqkagt
      421 gkltgvqrky ctskygyaak tepatfllea ks
//
LOCUS       XP_040943118             451 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943118
VERSION     XP_040943118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087184.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="G2/mitotic-specific cyclin-2 isoform X2"
                     /calculated_mol_wt=51239
     Region          147..321
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(166..167,170..171,174..175,178,251..252,255..259,
                     262..264,281,312..313,316..317,320..321)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          326..442
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..451
                     /gene="LOC121213875"
                     /coded_by="XM_041087184.1:353..1708"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqvglr agargkfara tgqnrralsi vnrdvvgapp fpcavkkrpl
       61 sqrnavsnki psthvhrpit rkfaadmask qqmkpevpne sddftiidld dpkesndtev
      121 pmferhveam leeidrmeev emediaegpf ldidngdkkn plavveyidd lykfyrkaec
      181 tgcvppnyma qqhdinekmr ailidwliev hykfelmeet lyltvnvidr fltvhqvvrk
      241 klqlvgitam llackyeevs vpvvedlili sdkaysrkev ldmvcdstlc linilrsirk
      301 kgdtyihldl qeklmintlq fnlssptpyv fmrrflkaaq snkklellsf fmielclvey
      361 emlkfppsll aaaaiftaqc tiggfkhwsk tcewytnyke eqlvdcsrmm vtfhqkagtg
      421 kltgvqrkyc tskygyaakt epatflleak s
//
LOCUS       XP_040943120             451 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943120
VERSION     XP_040943120.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087186.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="G2/mitotic-specific cyclin-2 isoform X3"
                     /calculated_mol_wt=51212
     Region          147..321
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(166..167,170..171,174..175,178,251..252,255..259,
                     262..264,281,312..313,316..317,320..321)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          326..442
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..451
                     /gene="LOC121213875"
                     /coded_by="XM_041087186.1:353..1708"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqevgl ragargkfar atgqnrrals ivnrdvvgap pfpcavkkrp
       61 lsqnavsnki psthvhrpit rkfaadmask qqmkpevpne sddftiidld dpkesndtev
      121 pmferhveam leeidrmeev emediaegpf ldidngdkkn plavveyidd lykfyrkaec
      181 tgcvppnyma qqhdinekmr ailidwliev hykfelmeet lyltvnvidr fltvhqvvrk
      241 klqlvgitam llackyeevs vpvvedlili sdkaysrkev ldmvcdstlc linilrsirk
      301 kgdtyihldl qeklmintlq fnlssptpyv fmrrflkaaq snkklellsf fmielclvey
      361 emlkfppsll aaaaiftaqc tiggfkhwsk tcewytnyke eqlvdcsrmm vtfhqkagtg
      421 kltgvqrkyc tskygyaakt epatflleak s
//
LOCUS       XP_040943121             433 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943121
VERSION     XP_040943121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087187.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..433
                     /product="G2/mitotic-specific cyclin-2 isoform X4"
                     /calculated_mol_wt=49202
     Region          129..303
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(148..149,152..153,156..157,160,233..234,237..241,
                     244..246,263,294..295,298..299,302..303)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          308..424
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..433
                     /gene="LOC121213875"
                     /coded_by="XM_041087187.1:353..1654"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqevgl ragargkfar atgqnrrals ivnrdvvgap pfpcavkkrp
       61 lsqkfaadma skqqmkpevp nesddftiid lddpkesndt evpmferhve amleeidrme
      121 evemediaeg pfldidngdk knplavveyi ddlykfyrka ectgcvppny maqqhdinek
      181 mrailidwli evhykfelme etlyltvnvi drfltvhqvv rkklqlvgit amllackyee
      241 vsvpvvedli lisdkaysrk evldmvcdst lclinilrsi rkkgdtyihl dlqeklmint
      301 lqfnlssptp yvfmrrflka aqsnkklell sffmielclv eyemlkfpps llaaaaifta
      361 qctiggfkhw sktcewytny keeqlvdcsr mmvtfhqkag tgkltgvqrk yctskygyaa
      421 ktepatflle aks
//
LOCUS       XP_040943122             424 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943122
VERSION     XP_040943122.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087188.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="G2/mitotic-specific cyclin-2 isoform X5"
                     /calculated_mol_wt=48154
     Region          148..294
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(167..168,171..172,175..176,179,252..253,256..260,
                     263..265,282,285..286,289..290,293..294)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          299..415
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..424
                     /gene="LOC121213875"
                     /coded_by="XM_041087188.1:353..1627"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqevgl ragargkfar atgqnrrals ivnrdvvgap pfpcavkkrp
       61 lsqrnavsnk ipsthvhrpi trkfaadmas kqqmkpevpn esddftiidl ddpkesndte
      121 vpmferhvea mleeidrmee vemediaegp fldidngdkk nplavveyid dlykfyrkae
      181 ctgcvppnym aqqhdinekm railidwlie vhykfelmee tlyltvnvid rfltvhqvvr
      241 kklqlvgita mllackyeev svpvvedlil isdkaysrke vldmeklmin tlqfnlsspt
      301 pyvfmrrflk aaqsnkklel lsffmielcl veyemlkfpp sllaaaaift aqctiggfkh
      361 wsktcewytn ykeeqlvdcs rmmvtfhqka gtgkltgvqr kyctskygya aktepatfll
      421 eaks
//
LOCUS       XP_040943123             423 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943123
VERSION     XP_040943123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087189.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="G2/mitotic-specific cyclin-2 isoform X6"
                     /calculated_mol_wt=48025
     Region          147..293
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(166..167,170..171,174..175,178,251..252,255..259,
                     262..264,281,284..285,288..289,292..293)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          298..414
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..423
                     /gene="LOC121213875"
                     /coded_by="XM_041087189.1:353..1624"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqvglr agargkfara tgqnrralsi vnrdvvgapp fpcavkkrpl
       61 sqrnavsnki psthvhrpit rkfaadmask qqmkpevpne sddftiidld dpkesndtev
      121 pmferhveam leeidrmeev emediaegpf ldidngdkkn plavveyidd lykfyrkaec
      181 tgcvppnyma qqhdinekmr ailidwliev hykfelmeet lyltvnvidr fltvhqvvrk
      241 klqlvgitam llackyeevs vpvvedlili sdkaysrkev ldmeklmint lqfnlssptp
      301 yvfmrrflka aqsnkklell sffmielclv eyemlkfpps llaaaaifta qctiggfkhw
      361 sktcewytny keeqlvdcsr mmvtfhqkag tgkltgvqrk yctskygyaa ktepatflle
      421 aks
//
LOCUS       XP_040943124             405 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040943124
VERSION     XP_040943124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087190.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="G2/mitotic-specific cyclin-2 isoform X7"
                     /calculated_mol_wt=45988
     Region          129..275
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(148..149,152..153,156..157,160,233..234,237..241,
                     244..246,263,266..267,270..271,274..275)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          280..396
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..405
                     /gene="LOC121213875"
                     /coded_by="XM_041087190.1:353..1570"
                     /db_xref="GeneID:121213875"
ORIGIN      
        1 magsdennpg vigpsqevgl ragargkfar atgqnrrals ivnrdvvgap pfpcavkkrp
       61 lsqkfaadma skqqmkpevp nesddftiid lddpkesndt evpmferhve amleeidrme
      121 evemediaeg pfldidngdk knplavveyi ddlykfyrka ectgcvppny maqqhdinek
      181 mrailidwli evhykfelme etlyltvnvi drfltvhqvv rkklqlvgit amllackyee
      241 vsvpvvedli lisdkaysrk evldmeklmi ntlqfnlssp tpyvfmrrfl kaaqsnkkle
      301 llsffmielc lveyemlkfp psllaaaaif taqctiggfk hwsktcewyt nykeeqlvdc
      361 srmmvtfhqk agtgkltgvq rkyctskygy aaktepatfl leaks
//
LOCUS       XP_016707686             239 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichol-phosphate mannosyltransferase subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707686
VERSION     XP_016707686.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..239
                     /product="dolichol-phosphate mannosyltransferase subunit
                     1"
                     /calculated_mol_wt=26545
     Region          5..239
                     /region_name="PLN02726"
                     /note="dolichyl-phosphate beta-D-mannosyltransferase"
                     /db_xref="CDD:215385"
     CDS             1..239
                     /gene="LOC107922259"
                     /coded_by="XM_016852197.2:109..828"
                     /db_xref="GeneID:107922259"
ORIGIN      
        1 mdaaknkysi ivptynerln ialivylifk hlrdvdfeii vvddgspdgt qevvkklqtl
       61 ygedrillrp rpkklglgta yihglkhasg nfvvimdadl shhpkylpsf ikkqletgas
      121 ivsgtryvkg ggvhgwnlir kltsrganvl aqtllwpgvs dltgsfrlyq ksvledviss
      181 cvskgyvfqm emivrasrkg yhieevpitf vdrvfgsskl ggseiveylk glvyllmtt
//
LOCUS       XP_040943125             132 aa            linear   PLN 06-AUG-2024
DEFINITION  small nuclear ribonucleoprotein SmD3b [Gossypium hirsutum].
ACCESSION   XP_040943125
VERSION     XP_040943125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087191.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..132
                     /product="small nuclear ribonucleoprotein SmD3b"
                     /calculated_mol_wt=14265
     Region          8..77
                     /region_name="Sm_D3"
                     /note="Sm protein D3; cd01721"
                     /db_xref="CDD:212468"
     Site            order(20..26,28..40,42..46)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212468"
     Site            order(23..26,28,30,36..37,42,44,62..72)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212468"
     Site            order(28,30,38,41,44,52,60,62..75)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212468"
     Site            order(40,42,53,66..68)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212468"
     Site            62..73
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212468"
     CDS             1..132
                     /gene="LOC121213876"
                     /coded_by="XM_041087191.1:52..450"
                     /db_xref="GeneID:121213876"
ORIGIN      
        1 msrslgipvk llheasghiv tvelksgely rgsmvecedn wncqlenitf takdgkvsql
       61 ehvfirgskv rfmvipdmlk napmfkrlda kikgkssslg vgrgravamr akaqaagrgt
      121 tagrgvvpsi rr
//
LOCUS       XP_016708109             709 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g42310,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708109
VERSION     XP_016708109.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852620.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708109.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..709
                     /product="pentatricopeptide repeat-containing protein
                     At5g42310, chloroplastic isoform X1"
                     /calculated_mol_wt=79474
     Region          190..219
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <192..>590
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          266..291
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          299..326
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          334..361
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          367..396
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          404..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          440..466
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          474..501
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          507..536
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          542..570
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          577..603
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          579..611
                     /region_name="PPR"
                     /note="pentatricopeptide repeat domain (PPR motif);
                     TIGR00756"
                     /db_xref="CDD:273253"
     Region          610..657
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          612..641
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          645..>689
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          647..684
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..709
                     /gene="LOC107922536"
                     /coded_by="XM_016852620.2:149..2278"
                     /db_xref="GeneID:107922536"
ORIGIN      
        1 mlllpptlpv rfpsiqlssp iirlhfshht slctsaaaae tsitlsfdke rdrdrygden
       61 ddendvlslh krrydftpll nylsrsnlas dsdsdsaspt sldpiefqla esyravpapl
      121 whsllkslca sssssssssi nlayavvswl qrhnlcfsye llysilihal grseklyeaf
      181 llsqrqsltp ltynalinac arnddlekal nlmsrmrqdg yqsdfvnysl iiqsltrnnk
      241 idssllqkly geiecdriev dghllndiiv gfakandpsr alkflamaqa iglspktatl
      301 vaviyslgcc griaeaeavf eemkgsglkp rtraynallk gyvksgslkd aelvvsemer
      361 sgvspdehty sllidaysna grwesarivl kemeannvkp nsfvysrila syrnkgewqr
      421 sfqvlkemks ngiqpdrhfy nvmidtfgky ncldhamatf drmlsegiep dtvtwntlid
      481 chckagwhdr aeqlfeemke kgyspcttty niminslgeq erwddvksll gkmqgegllp
      541 nivtyttlvd iygksgrfsd aieclelmks aglkpsstmy nalinayaqr glseqamnal
      601 rvmgadglkp nllalnslin afgedrrdve afavlqymke ngvkpdvvty ttlmkalirv
      661 dkfhkilcvv wikvpavyee milsgcspdr karamlrsal rymkqavks
//
LOCUS       XP_040943127             701 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g42310,
            chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943127
VERSION     XP_040943127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087193.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..701
                     /product="pentatricopeptide repeat-containing protein
                     At5g42310, chloroplastic isoform X2"
                     /calculated_mol_wt=78519
     Region          190..219
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <192..>590
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          266..291
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          299..326
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          334..361
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          367..396
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          404..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          440..466
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          474..501
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          507..536
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          542..570
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          577..603
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          579..611
                     /region_name="PPR"
                     /note="pentatricopeptide repeat domain (PPR motif);
                     TIGR00756"
                     /db_xref="CDD:273253"
     Region          610..657
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          612..641
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          645..>681
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          647..676
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..701
                     /gene="LOC107922536"
                     /coded_by="XM_041087193.1:169..2274"
                     /db_xref="GeneID:107922536"
ORIGIN      
        1 mlllpptlpv rfpsiqlssp iirlhfshht slctsaaaae tsitlsfdke rdrdrygden
       61 ddendvlslh krrydftpll nylsrsnlas dsdsdsaspt sldpiefqla esyravpapl
      121 whsllkslca sssssssssi nlayavvswl qrhnlcfsye llysilihal grseklyeaf
      181 llsqrqsltp ltynalinac arnddlekal nlmsrmrqdg yqsdfvnysl iiqsltrnnk
      241 idssllqkly geiecdriev dghllndiiv gfakandpsr alkflamaqa iglspktatl
      301 vaviyslgcc griaeaeavf eemkgsglkp rtraynallk gyvksgslkd aelvvsemer
      361 sgvspdehty sllidaysna grwesarivl kemeannvkp nsfvysrila syrnkgewqr
      421 sfqvlkemks ngiqpdrhfy nvmidtfgky ncldhamatf drmlsegiep dtvtwntlid
      481 chckagwhdr aeqlfeemke kgyspcttty niminslgeq erwddvksll gkmqgegllp
      541 nivtyttlvd iygksgrfsd aieclelmks aglkpsstmy nalinayaqr glseqamnal
      601 rvmgadglkp nllalnslin afgedrrdve afavlqymke ngvkpdvvty ttlmkalirv
      661 dkfhkvpavy eemilsgcsp drkaramlrs alrymkqavk s
//
LOCUS       XP_016708269             430 aa            linear   PLN 06-AUG-2024
DEFINITION  metallocarboxypeptidase A-like protein MCYG_01475 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708269
VERSION     XP_016708269.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852780.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..430
                     /product="metallocarboxypeptidase A-like protein
                     MCYG_01475 isoform X1"
                     /calculated_mol_wt=48933
     Region          97..319
                     /region_name="M14-CPA-like"
                     /note="Peptidase M14 carboxypeptidase A-like domain;
                     uncharacterized subfamily; cd06227"
                     /db_xref="CDD:349446"
     Site            order(107,110,169,178..179,228..229,235,303)
                     /site_type="active"
                     /db_xref="CDD:349446"
     CDS             1..430
                     /gene="LOC107922653"
                     /coded_by="XM_016852780.2:299..1591"
                     /db_xref="GeneID:107922653"
ORIGIN      
        1 mggsfllfsy llsvfaslps ftvvkadsdl trpsftpinr dlyhssddli eqikslvhrh
       61 pdkltvetik agnkgytsei tvvtycqsrk etddkskfri llsfgqhgre litselalri
      121 lsilseeqfl pkmdraslng tlenvvikvv pmenlngrkl veagnlcerr ngrgvdlnrn
      181 wsvdwgkkek dydpyeenpg iapfsepetq imrkiaisfd phiwvnvhsg mealfmpydh
      241 knrtpdglps qrmrllleel nnvhchkrcm igsgggsvgy lahgtatdym hdvvrvpmsf
      301 tfeiygdnta tlkdcfkmfn pvdhttfkrv lndwsaafft ifklgphqid vhskaavssm
      361 dkwvsideyf dgylmgrrnr ygkkmevlev gmqeirtyfr lfllssvlll fmfcsriskt
      421 grqivsaipi
//
LOCUS       XP_016708270             344 aa            linear   PLN 06-AUG-2024
DEFINITION  metallocarboxypeptidase A-like protein MCYG_01475 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016708270
VERSION     XP_016708270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852781.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..344
                     /product="metallocarboxypeptidase A-like protein
                     MCYG_01475 isoform X2"
                     /calculated_mol_wt=39191
     Region          14..233
                     /region_name="M14-CPA-like"
                     /note="Peptidase M14 carboxypeptidase A-like domain;
                     uncharacterized subfamily; cd06227"
                     /db_xref="CDD:349446"
     Site            order(21,24,83,92..93,142..143,149,217)
                     /site_type="active"
                     /db_xref="CDD:349446"
     CDS             1..344
                     /gene="LOC107922653"
                     /coded_by="XM_016852781.2:132..1166"
                     /db_xref="GeneID:107922653"
ORIGIN      
        1 mtnpssgsfl lfivfqsfgq hgrelitsel alrilsilse eqflpkmdra slngtlenvv
       61 ikvvpmenln grklveagnl cerrngrgvd lnrnwsvdwg kkekdydpye enpgiapfse
      121 petqimrkia isfdphiwvn vhsgmealfm pydhknrtpd glpsqrmrll leelnnvhch
      181 krcmigsggg svgylahgta tdymhdvvrv pmsftfeiyg dntatlkdcf kmfnpvdhtt
      241 fkrvlndwsa afftifklgp hqidvhskaa vssmdkwvsi deyfdgylmg rrnrygkkme
      301 vlevgmqeir tyfrlfllss vlllfmfcsr isktgrqivs aipi
//
LOCUS       XP_016707371             796 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-rRNA-processing protein TSR1 homolog [Gossypium hirsutum].
ACCESSION   XP_016707371
VERSION     XP_016707371.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851882.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707371.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..796
                     /product="pre-rRNA-processing protein TSR1 homolog"
                     /calculated_mol_wt=89219
     Region          4..785
                     /region_name="COG5177"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:227504"
     Region          489..785
                     /region_name="RIBIOP_C"
                     /note="40S ribosome biogenesis protein Tsr1 and BMS1
                     C-terminal; pfam04950"
                     /db_xref="CDD:461497"
     CDS             1..796
                     /gene="LOC107922050"
                     /coded_by="XM_016851882.2:376..2766"
                     /db_xref="GeneID:107922050"
ORIGIN      
        1 mggsraqvnk phktrfssks srnihkishk dknrtaksnh nvaqgaraar lqrskmlreq
       61 kkeallkekr assgsagppr villfplsvs vnvsslaedi lrllsadvgg afsstvvsse
      121 yklratvlha phgdllscme makvadliaf vasateqstc dyidsfgsqc lsvfrslglp
      181 stvvfirdlp telkrrndak kiitsgltse fpedckfypa dtkddlhkfm wlfkeqrltt
      241 phwrnqrpyl iaqkvdmvpd dsspekctll ltgytrahsl svnqlvhvsg agdfqlsrid
      301 imkdpiplna rkdhnamdsd diedaeiirs lapdpssqep llvenvpdpl ageqtwptea
      361 emaeaernqk qkrlrkralp rgtseyqaaw ivddtdgeds gvendgddde dddgmlldeg
      421 esgfpsqeds nnpdfeedqv slhlrdsdee tendsvmmeg dnmtreqied eikkikeaha
      481 edeefpdevd tpldvparkr fakyrglksf rtsswdpkes lppeyarifa fdsfartqkh
      541 vvaqalkveq egrddcapvg sfarfyikev pfhvasnlcv asrtapivlc gllqheskms
      601 vlhfsikkhd sydapikske elifhvgfrq fvarpifstd ninsdkhkme rflhagrfsi
      661 asiyasisfp plplialkna agagtpavaa vgslrsidpd riilkkiilt gypqrvsklk
      721 atvrymfhnp edvrwfkpve vwtkcgrrgr vkepigthgg mkcifngglq qhdtvcmsly
      781 kraypkwpeh rfpanv
//
LOCUS       XP_016707370             796 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-rRNA-processing protein TSR1 homolog [Gossypium hirsutum].
ACCESSION   XP_016707370
VERSION     XP_016707370.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707370.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..796
                     /product="pre-rRNA-processing protein TSR1 homolog"
                     /calculated_mol_wt=89313
     Region          4..785
                     /region_name="COG5177"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:227504"
     Region          489..785
                     /region_name="RIBIOP_C"
                     /note="40S ribosome biogenesis protein Tsr1 and BMS1
                     C-terminal; pfam04950"
                     /db_xref="CDD:461497"
     CDS             1..796
                     /gene="LOC107922049"
                     /coded_by="XM_016851881.2:86..2476"
                     /db_xref="GeneID:107922049"
ORIGIN      
        1 mggsraqvnk phktrfssks srnihkisqk dknriaksnr nvtqgaraar lqrskmlreq
       61 kkeallkekr assgsasppr villfplsas vnvsslaedi lrllsadvsr alsstvasse
      121 yklratvlha phgdllscme makvadliaf vasateqstc dyidsfgsqc lsvfrslglp
      181 stvvfirdlp telkrqndak kivtcsltse fpedckfypa dtkddlhkfm wlfkeqrltt
      241 phwrnqrpyl iaqkvdmvpd dsspekctll ltgytrahsl svnqlvhvsg agdfqlsrid
      301 imkdpiplna rkdhnamdsd diedaeiirs lapdpsslep llvenvpdpl ageqtwptea
      361 emaeaernqk qkrlrkralp rgtseyqaaw ivddtdgeds gvendgddde dddgmlldeg
      421 esgcpsqedt nnrdfeedqa slhlrdsdee tendsvmmeg dnmtreqied eikkikeaha
      481 edeefpdevd tpldvparkr fakyrglksf rtsswdpkes lppeyarifa fdsfartqkh
      541 vvvkalkveq egrddcapvg sfarfyikev pfhaasnlca asrtapivlc gllqheskms
      601 vlhfsikkhd sydapikske elifhvgfrq fvarpifstd ninsdkhkme rflhagrfsi
      661 asiyapisfp plplialkna agagtpavaa vgslrsidpd riilkkiilt gypqrvsklk
      721 atvrymfhnp edvrwfkpve vwtkcgrrgr vkepigthgg mkcifngglq qhdtvcmsly
      781 kraypkwpeh rfpanv
//
LOCUS       XP_040943129             216 aa            linear   PLN 06-AUG-2024
DEFINITION  acyltransferase Pun1-like [Gossypium hirsutum].
ACCESSION   XP_040943129
VERSION     XP_040943129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087195.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..216
                     /product="acyltransferase Pun1-like"
                     /calculated_mol_wt=23664
     Region          3..>200
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..216
                     /gene="LOC121213877"
                     /coded_by="XM_041087195.1:34..684"
                     /db_xref="GeneID:121213877"
ORIGIN      
        1 mvmevkivsk qlikptsstp hhltthklsf ldqfipssyv smvffyvnqe tsippadiia
       61 snsmrpqllk eslsqtltlf ypfagrmkdh lsiacndega yyvkarvnlp lcvflnlpds
      121 syvsqllpes nwtimsagsy iamiqvttfa cggiaigacl shviadapaa ttfisswaal
      181 trkcgekapc lnfeasfifp llgikkllvv rqllfc
//
LOCUS       XP_016707232             457 aa            linear   PLN 06-AUG-2024
DEFINITION  stemmadenine O-acetyltransferase [Gossypium hirsutum].
ACCESSION   XP_016707232
VERSION     XP_016707232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851743.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..457
                     /product="stemmadenine O-acetyltransferase"
                     /calculated_mol_wt=50478
     Region          3..441
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..457
                     /gene="LOC107921945"
                     /coded_by="XM_016851743.1:1..1374"
                     /db_xref="GeneID:107921945"
ORIGIN      
        1 mvmvveivsk efikptsptp hhlrthllsf ldqflpsiyv pmvlfymdqe rsipaatsns
       61 rrsqllkesl setltlfypl agrikdhlsi dcndegayyv earvnhplre flnhtdssyv
      121 sqllpaeatw tattaggyia miqvttfacg gislgaflsh iifdgpaatt fisswaaltr
      181 kcgeeagsan fdasfvfpqs vaypreatls alfspflkkg icrsmrivfd asaidllkvk
      241 tasssvrdpt rvevvsallc kcimatfkak sgiqkstlit havnlrqrav pqfskhsmgn
      301 flcmaaalvr anetgldnlv chlrkairka dgnfvtallg dggwlkfsey ikeigkewng
      361 eageidfigf tswcnfglye idfgwgkptw vtctastkse avfmntivlm dtkmgngiea
      421 wvfleeqhmv mleqnqella fgnlerspls lkvdysv
//
LOCUS       XP_040943130             817 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g76280 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943130
VERSION     XP_040943130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087196.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..817
                     /product="pentatricopeptide repeat-containing protein
                     At1g76280 isoform X1"
                     /calculated_mol_wt=93078
     Region          61..85
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          91..118
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          126..153
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          160..189
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <163..>261
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          195..220
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          229..256
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          344..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <349..>707
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          530..554
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          566..593
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          567..609
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          599..628
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          634..659
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          669..698
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          704..728
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..817
                     /gene="LOC107917965"
                     /coded_by="XM_041087196.1:261..2714"
                     /db_xref="GeneID:107917965"
ORIGIN      
        1 mriplrsiad tlcrfksgel ergrgnfirr lelcrsvati ngnvflgygg epltksiqvq
       61 ivdalrlger srassllldf gngnqslkan dfvyilnyca rspdplfvme twrlmeekei
      121 dlnntcyllm vralcrggyl eeackfmkfl renhgtypfl pvyncflgac akmksiihan
      181 qcldlmelqr vgkneitysv llklavwqqd lsavreiwed yikhyslnii slrrfiwsft
      241 rlkdlksaye tlqhmvalai sgkhfvsrtd egrlyssrld ipipskselg slnvqsgene
      301 qslafkfdid ssniersksi satvgmlnny knlpvmevlr lsindvlhac aqarayglae
      361 qlmmliqnlg lqpsshtydg fvraiiqrrg fgagmemlkv meernlkphd stlaalsvqc
      421 skaleldlae alleqvcecp ypypfnafle acdnmdqpkr alrilakmrq lklqpdirty
      481 ellfsmfgnv napyeegnrl shvdsrkrin aiemdmakng vqhshlsmkn llkalgaegm
      541 tiellqylhv aenlfchtnt klgapmynvv lhslveanes hmaiqifkkm tssgflpnaa
      601 tynimvdccs yikcfksgca lvsmmvrhgf ypetrtytal mkilleyenf dealslvdqa
      661 sleghqldvl myntilkkas ekvridiief iiermhqdkv qpdpvtcnyv fsayvdggfh
      721 ntamealqvl smwmisyedm tleekkiefe kdfvssedlq aeskilqvfk dydehlaaal
      781 fnlrwcailg fpvswspnqs qwttrlstny dstrtvl
//
LOCUS       XP_040943131             709 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g76280 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943131
VERSION     XP_040943131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087197.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..709
                     /product="pentatricopeptide repeat-containing protein
                     At1g76280 isoform X2"
                     /calculated_mol_wt=81045
     Region          18..45
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          52..81
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <55..>153
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          87..112
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          121..148
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          236..261
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <241..>599
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          267..296
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          422..446
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          458..485
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          459..501
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          491..520
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          526..551
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          561..590
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          596..620
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..709
                     /gene="LOC107917965"
                     /coded_by="XM_041087197.1:143..2272"
                     /db_xref="GeneID:107917965"
ORIGIN      
        1 metwrlmeek eidlnntcyl lmvralcrgg yleeackfmk flrenhgtyp flpvyncflg
       61 acakmksiih anqcldlmel qrvgkneity svllklavwq qdlsavreiw edyikhysln
      121 iislrrfiws ftrlkdlksa yetlqhmval aisgkhfvsr tdegrlyssr ldipipskse
      181 lgslnvqsge neqslafkfd idssniersk sisatvgmln nyknlpvmev lrlsindvlh
      241 acaqaraygl aeqlmmliqn lglqpsshty dgfvraiiqr rgfgagmeml kvmeernlkp
      301 hdstlaalsv qcskaleldl aealleqvce cpypypfnaf leacdnmdqp kralrilakm
      361 rqlklqpdir tyellfsmfg nvnapyeegn rlshvdsrkr inaiemdmak ngvqhshlsm
      421 knllkalgae gmtiellqyl hvaenlfcht ntklgapmyn vvlhslvean eshmaiqifk
      481 kmtssgflpn aatynimvdc csyikcfksg calvsmmvrh gfypetrtyt almkilleye
      541 nfdealslvd qasleghqld vlmyntilkk asekvridii efiiermhqd kvqpdpvtcn
      601 yvfsayvdgg fhntamealq vlsmwmisye dmtleekkie fekdfvssed lqaeskilqv
      661 fkdydehlaa alfnlrwcai lgfpvswspn qsqwttrlst nydstrtvl
//
LOCUS       XP_016707385             336 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707385
VERSION     XP_016707385.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851896.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707385.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37668
     Region          85..167
                     /region_name="DUF760"
                     /note="Protein of unknown function (DUF760); pfam05542"
                     /db_xref="CDD:461674"
     Region          238..321
                     /region_name="DUF760"
                     /note="Protein of unknown function (DUF760); pfam05542"
                     /db_xref="CDD:461674"
     CDS             1..336
                     /gene="LOC107922065"
                     /coded_by="XM_016851896.2:321..1331"
                     /db_xref="GeneID:107922065"
ORIGIN      
        1 mnsltlkpss fvlqssftvf ssydkskqsf psvrfptnik sntrlglrik aydssksdda
       61 skpngdskpp ngtlknqqpk arrdilleyv knvqpefmel fvkrapqqvv eamrqtvtnm
      121 igtlppqffa vtvttvaenl aqlmysvmmt gymfknaqyr lelqqsleqa alpevqekkd
      181 vpdyapgtqk nvsgevirwn nvsgpekida kkyielleae ieelnrqvgr nsangpnell
      241 eylkslepqn lkeltssage dvvfamntfi krllavsdpd qmktsvtets apelakllyw
      301 lmvvgyslrn ievrfdmerv lgtppklael ppgeni
//
LOCUS       XP_016707425             582 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 16 [Gossypium hirsutum].
ACCESSION   XP_016707425
VERSION     XP_016707425.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707425.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..582
                     /product="O-fucosyltransferase 16"
                     /calculated_mol_wt=66438
     Region          116..437
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(124..127,282,284,356..358,400,419..421)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..582
                     /gene="LOC107922097"
                     /coded_by="XM_016851936.2:266..2014"
                     /db_xref="GeneID:107922097"
ORIGIN      
        1 malprrrnls ynrfrslvkf issisgvlli lfaflsflap spnesqhfhl rhhhnsfnav
       61 vedpvtsgds vfhvpssggk ldrdiwssrn akffygcsnv sakfakaeav srptrylaia
      121 tsgglnqqrt gitdavvaar ilnatlvvpk ldqksfwkda snfseifdvd wfisslskdv
      181 kiikqlpkrg gkswtpytmr vprkcsercy qnrvlpvilk rhhavqlnkf dyrlankldt
      241 dlqklrcrvn yhalkfadpi lemgktlvhr mrmrskryia lhlrfepdml afsgcdyggg
      301 ekernelgai rkrwktlhkn npdkqrrqgk cpltpeevgl mlralgygsd vhiyvasgev
      361 yggeetlrpl kslfpnfysk dtiatkeela pfssfssrma aldfivcdes dvfvtnnngn
      421 marilagrrk yfghkptirp nakklyrlfl srsnmtweaf asrvrtfqrg fmgepkevrp
      481 grgefhenps acicedsear ekattysrgk kngklddssr kkevivsddq ndyddndepr
      541 wpdldddenq vwpqeklhyn gtgsdydavi sdepeleeml sd
//
LOCUS       XP_016706554             425 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706554
VERSION     XP_016706554.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851065.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706554.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48806
     CDS             1..425
                     /gene="LOC107921186"
                     /coded_by="XM_016851065.2:410..1687"
                     /db_xref="GeneID:107921186"
ORIGIN      
        1 msttdrgfat lfefnlskly lsqglaprkk qrmcfrltml srisccypep vvpirrgngs
       61 ansnekkgen wrldsknslh rvrvlaspam sfasaqsrfs skqqkfypqc tprnsgpqsr
      121 dtlptrdtgi aneedwgisl lnenvnesgt nedgstwyrq sgedlgengy lrrwtmmggk
      181 shdgssewme twwetsdwsg ykelgveksg rnaegdswwe twqellhqdq wsnlahieks
      241 aqkqaksgse nagwhekwwe kydakgwtek gahkygrlne qswwekwgeh ydgrgsvlkw
      301 tdkwaktevg trwgdkweek ffagvgsrqg etwhvsasgd rwsrtwgeeh fgngkvhkyg
      361 ksttgeswdl ivheetyyea ephygwadvv gdssqlltiq prprppsvfp nlefgssppq
      421 lddqt
//
LOCUS       XP_016706471             415 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706471
VERSION     XP_016706471.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850982.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706471.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..415
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=46683
     CDS             1..415
                     /gene="LOC107921111"
                     /coded_by="XM_016850982.2:227..1474"
                     /db_xref="GeneID:107921111"
ORIGIN      
        1 mvklaekinm likkgvsdld wrllfliivp lsillfials stpsihyffp lrsflfttps
       61 pdvtgmlrqs rmavclvgga rrfeltgpsi mervikeypn adlflhspmd knafklsllr
      121 taprlasvri fdqkivpqta eqvrvltaan spngiqgllq yfnlvegclt mivshqkqhn
      181 ftydwivrtr vdgywnapln pqhfvagryt vpsgsvyggl ndrlgigdfy tskaalsrls
      241 lipkldsagy rrlnsesafk aqlttqnisy venrlpfcvv tdrryrfpps hmgvpvaals
      301 spgplsgvkc rpctpvckgr cvadvmssld krwswtnwrn gtielcdahg gwedrwemif
      361 drvagkklae grrqvkdlmf eecvadfrem kkmavnweap tpeeicglgl kitpk
//
LOCUS       XP_016706472             411 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706472
VERSION     XP_016706472.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850983.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706472.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..411
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=46271
     CDS             1..411
                     /gene="LOC107921111"
                     /coded_by="XM_016850983.2:239..1474"
                     /db_xref="GeneID:107921111"
ORIGIN      
        1 mvklaekinm likkgvsdld wrllfliivp lsillfials stpsihyffp lrsflfttps
       61 pdvtgmlrqs rmavclvgga rrfeltgpsi mervikeypn adlflhspmd knafklsllr
      121 taprlasvri fdqkivpqta eqvrvltaan spngiqyfnl vegcltmivs hqkqhnftyd
      181 wivrtrvdgy wnaplnpqhf vagrytvpsg svygglndrl gigdfytska alsrlslipk
      241 ldsagyrrln sesafkaqlt tqnisyvenr lpfcvvtdrr yrfppshmgv pvaalsspgp
      301 lsgvkcrpct pvckgrcvad vmssldkrws wtnwrngtie lcdahggwed rwemifdrva
      361 gkklaegrrq vkdlmfeecv adfremkkma vnweaptpee icglglkitp k
//
LOCUS       XP_016707130              93 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707130
VERSION     XP_016707130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851641.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..93
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9809
     CDS             1..93
                     /gene="LOC107921788"
                     /coded_by="XM_016851641.2:66..347"
                     /db_xref="GeneID:107921788"
ORIGIN      
        1 merksetggg kgkeqseshq pphispmypv thnaygggly gtdqgkakkp knppasetqs
       61 adgpneakne pkhkpppssg drdiditgqs yiq
//
LOCUS       XP_016706594             299 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706594
VERSION     XP_016706594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851105.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..299
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33672
     Region          69..295
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..299
                     /gene="LOC107921227"
                     /coded_by="XM_016851105.2:89..988"
                     /db_xref="GeneID:107921227"
ORIGIN      
        1 mvgvfrrsls fpnkpstrss kppishhirs islpcrshpl isqlrdeitd lkswswnpdn
       61 rtsawlcdgl srlkdvhdsl hdflqlpqth qvlshkrewv eklledflrf vdaygifqss
      121 flalkeeqla armalrrkdd skmavylksr kkmakeiakl vssipctgpy iipgsavvfi
      181 adteltgiis dvievtvsvs valfngisms fasrksswmg vtsskkskkv kmeegikefq
      241 eigeanmwgl rkkgeeevrm vlkrmqdleg ciadvesgse kafrslintr vsllntltn
//
LOCUS       XP_016706210             728 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706210
VERSION     XP_016706210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850721.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..728
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1
                     isoform X1"
                     /calculated_mol_wt=83197
     Region          46..103
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          308..614
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..728
                     /gene="LOC107920898"
                     /coded_by="XM_016850721.2:648..2834"
                     /db_xref="GeneID:107920898"
ORIGIN      
        1 mkdvyvipmp atfftlyksv qnwskkrvft elsllpeemr rgvlfmgcaa skldqlpavs
       61 fcrdrcdfld dtlrqsyala dahlaymqsl ktlsptlrhf fdqcfkstsg ndsadstekp
      121 pkqasplssp drslsssnsg shiqfdtdle edeadkdfst slneihssyh nhgiltsysl
      181 pnpnyhgnty qnsefsgsgw ktppppapks aawdylnffd elyeryelpy tsskavknke
      241 gsnddeaqlv kqihgeekss andrkakgee kprgetvsvk kkvdsatekv ekttdlkepk
      301 vqndkqsvse vmkelqvlfe kasesgnevl kmldtqkfry hhkksvyqgs tqilhiitsn
      361 ssetetllsk dkvsstende idnaqnlssi lrklcmwetk lydevkaeek lriihaktcr
      421 qmkslnqkgg narrvdstrt liravstkmr vavqvidkva vtinklmdee lwpevnelih
      481 rlfrmwkvil echscqcqkv meakcldfia qndklndshl evamrlklql qnwslsffsw
      541 ieaqrgfvka lngwlrrcll yepdkatdgv splspvrsrt ptvivilnmw seamdkdklp
      601 ekevgeavhg llmsvnqvve qynvdlqqri iadkdmerkv kmlekegqkm qklmqaqvkk
      661 mtriareesd vllprdatpr sdirdatslv nglkqifmgm eklanhsrqa yeelhkymee
      721 skatqeyp
//
LOCUS       XP_016706211             683 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016706211
VERSION     XP_016706211.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850722.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..683
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1
                     isoform X2"
                     /calculated_mol_wt=77817
     Region          1..58
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          263..569
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..683
                     /gene="LOC107920898"
                     /coded_by="XM_016850722.2:166..2217"
                     /db_xref="GeneID:107920898"
ORIGIN      
        1 mgcaaskldq lpavsfcrdr cdflddtlrq syaladahla ymqslktlsp tlrhffdqcf
       61 kstsgndsad stekppkqas plsspdrsls ssnsgshiqf dtdleedead kdfstslnei
      121 hssyhnhgil tsyslpnpny hgntyqnsef sgsgwktppp papksaawdy lnffdelyer
      181 yelpytsska vknkegsndd eaqlvkqihg eekssandrk akgeekprge tvsvkkkvds
      241 atekvekttd lkepkvqndk qsvsevmkel qvlfekases gnevlkmldt qkfryhhkks
      301 vyqgstqilh iitsnssete tllskdkvss tendeidnaq nlssilrklc mwetklydev
      361 kaeeklriih aktcrqmksl nqkggnarrv dstrtlirav stkmrvavqv idkvavtink
      421 lmdeelwpev nelihrlfrm wkvilechsc qcqkvmeakc ldfiaqndkl ndshlevamr
      481 lklqlqnwsl sffswieaqr gfvkalngwl rrcllyepdk atdgvsplsp vrsrtptviv
      541 ilnmwseamd kdklpekevg eavhgllmsv nqvveqynvd lqqriiadkd merkvkmlek
      601 egqkmqklmq aqvkkmtria reesdvllpr datprsdird atslvnglkq ifmgmeklan
      661 hsrqayeelh kymeeskatq eyp
//
LOCUS       XP_040943133             566 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943133
VERSION     XP_040943133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087199.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..566
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1
                     isoform X3"
                     /calculated_mol_wt=64957
     Region          146..452
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..566
                     /gene="LOC107920898"
                     /coded_by="XM_041087199.1:360..2060"
                     /db_xref="GeneID:107920898"
ORIGIN      
        1 mtpptpprnr rskllpsprr tvlslvqtqn sefsgsgwkt ppppapksaa wdylnffdel
       61 yeryelpyts skavknkegs nddeaqlvkq ihgeekssan drkakgeekp rgetvsvkkk
      121 vdsatekvek ttdlkepkvq ndkqsvsevm kelqvlfeka sesgnevlkm ldtqkfryhh
      181 kksvyqgstq ilhiitsnss etetllskdk vsstendeid naqnlssilr klcmwetkly
      241 devkaeeklr iihaktcrqm kslnqkggna rrvdstrtli ravstkmrva vqvidkvavt
      301 inklmdeelw pevnelihrl frmwkvilec hscqcqkvme akcldfiaqn dklndshlev
      361 amrlklqlqn wslsffswie aqrgfvkaln gwlrrcllye pdkatdgvsp lspvrsrtpt
      421 vivilnmwse amdkdklpek evgeavhgll msvnqvveqy nvdlqqriia dkdmerkvkm
      481 lekegqkmqk lmqaqvkkmt riareesdvl lprdatprsd irdatslvng lkqifmgmek
      541 lanhsrqaye elhkymeesk atqeyp
//
LOCUS       XP_016707396             699 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016707396
VERSION     XP_016707396.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707396.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..699
                     /product="ATP-dependent zinc metalloprotease FTSH,
                     chloroplastic"
                     /calculated_mol_wt=74793
     Region          <61..138
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          121..689
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..699
                     /gene="LOC107922073"
                     /coded_by="XM_016851907.2:364..2463"
                     /db_xref="GeneID:107922073"
ORIGIN      
        1 mansllssnf fgtqlllspp tpkttrklqv tqsilnkkpn sshsvktlqs hatiaallfs
       61 svapqalavd napptpppvi eaqptkpsps nqspfsqnll ltapkpqsqs sdlpegsqwr
      121 yseflnavkk gkvervrfsk dgsalqltav dgrratvivp ndpdlidila mngvdisvse
      181 gdsgnglfnf ignllfpfla faglfflfrr aqggpggpgg lggpmdfgrs kskfqevpet
      241 gvtfsdvaga dqaklelqev vdflknpdky talgakipkg cllvgppgtg ktllaravag
      301 eagvpffsca asefvelfvg vgasrvrdlf dkakskapci vfideidavg rqrgaglggg
      361 ndereqtinq lltemdgfsg nsgvivlaat nrpdvldaal lrpgrfdrqv tvdrpdvagr
      421 vkilqvhsrg kalakdvdfe kisrrtpgft gadlqnlmne aailaarrdl keiskdeisd
      481 aleriiagpe kknavvsdek kklvayheag halvgalmpe ydpvakisii prgqaggltf
      541 fapseerles glysrsylen qmavalggri aeevifgeen vttgasndfm qvsrvarqmv
      601 erfgfskkig qvaigggggn pflgqqmssq kdysmatadv vdaevrdlve taytrakqii
      661 tthidilhkl aqllmeketv dgeefmslfi dgkaelyvs
//
LOCUS       XP_016708290             120 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708290
VERSION     XP_016708290.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852801.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..120
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13213
     Region          45..>81
                     /region_name="RING_CH-C4HC3_MARCH"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH proteins (MARCH); cd16495"
                     /db_xref="CDD:438158"
     Region          <98..120
                     /region_name="SecA"
                     /note="Preprotein translocase subunit SecA (ATPase, RNA
                     helicase) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG0653"
                     /db_xref="CDD:440418"
     CDS             1..120
                     /gene="LOC107922669"
                     /coded_by="XM_016852801.2:414..776"
                     /db_xref="GeneID:107922669"
ORIGIN      
        1 maissvylli dnersiegia shgsptdtnp neidleagpa dqiqcricle tdgrdfiapc
       61 kckgtskyvh recldhwrav kvqklmgstp ldlakfnmvk sgemsrnapc pcgskkrykr
//
LOCUS       XP_040943135              83 aa            linear   PLN 06-AUG-2024
DEFINITION  protein translocase subunit SecA isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943135
VERSION     XP_040943135.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087201.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..83
                     /product="protein translocase subunit SecA isoform X2"
                     /calculated_mol_wt=9306
     Region          <29..83
                     /region_name="SecA"
                     /note="Preprotein translocase subunit SecA (ATPase, RNA
                     helicase) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG0653"
                     /db_xref="CDD:440418"
     CDS             1..83
                     /gene="LOC107922669"
                     /coded_by="XM_041087201.1:712..963"
                     /db_xref="GeneID:107922669"
ORIGIN      
        1 mfrslasckd venalakftw akevhkkmvk lkeegkpmpk nfaevqklmg stpldlakfn
       61 mvksgemsrn apcpcgskkr ykr
//
LOCUS       XP_016706774             220 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706774
VERSION     XP_016706774.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851285.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG5 isoform X1"
                     /calculated_mol_wt=24001
     Region          14..192
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..220
                     /gene="LOC107921435"
                     /coded_by="XM_016851285.2:165..827"
                     /db_xref="GeneID:107921435"
ORIGIN      
        1 meenkavkss rfkrvcvfcg sssgkrncyr daalelgkel vsrrldlvyg ggsvglmglv
       61 sqevhrgggh vlgiipktlm skeitgetvg evkpvtdmhq rkaemarhsd cfialpggyg
      121 tleellevit waqlgihdkp vglinvdgyy nylltfldka vddgfikppq rhivvsapta
      181 telvqkleey vpmhdgvvak asweaeqlel nsslqteiac
//
LOCUS       XP_016706776             213 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706776
VERSION     XP_016706776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851287.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..213
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG5 isoform X2"
                     /calculated_mol_wt=23323
     Region          14..185
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..213
                     /gene="LOC107921435"
                     /coded_by="XM_016851287.2:280..921"
                     /db_xref="GeneID:107921435"
ORIGIN      
        1 meenkavkss rfkrvcvfcg sssgkrncyr daalelgkel vsrrldlvyg ggsvglmglv
       61 sqevhrgggh vlgiipktlm skeitgetvg evkpvtdmhq rkaemarhsd cfialpelle
      121 vitwaqlgih dkpvglinvd gyynylltfl dkavddgfik ppqrhivvsa ptatelvqkl
      181 eeyvpmhdgv vakasweaeq lelnsslqte iac
//
LOCUS       XP_016707219             226 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707219
VERSION     XP_016707219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851730.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..226
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25745
     Region          5..223
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..226
                     /gene="LOC107921925"
                     /coded_by="XM_016851730.2:41..721"
                     /db_xref="GeneID:107921925"
ORIGIN      
        1 manlnfnalr dlhnsandll hspiikralv hqgqeqwvhq vsesslrmld vcgisrdill
       61 lvkehvqdlq ftlrrvstde adigtkiavy nryskklkke tlkclqslkg mrnkpiitcd
      121 iddnltvvvd vlrevsatai svvesllsli sipwlerrss kgylaakfmr sswrrvydvs
      181 demavqsank rleaveitie dleaeiecmf rrliqtrvll lniltn
//
LOCUS       XP_016706398              70 aa            linear   PLN 06-AUG-2024
DEFINITION  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
            [Gossypium hirsutum].
ACCESSION   XP_016706398
VERSION     XP_016706398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850909.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..70
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 2"
                     /calculated_mol_wt=7712
     CDS             1..70
                     /gene="LOC107921054"
                     /coded_by="XM_016850909.2:213..425"
                     /db_xref="GeneID:107921054"
ORIGIN      
        1 mggghggstt ykgltlhhpk rwhvvtgkgl cavmwfwvly rakqdgpvvl gwrhpweghd
       61 ghshghgdkh
//
LOCUS       XP_016707980             199 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoprotein ECPP44 [Gossypium hirsutum].
ACCESSION   XP_016707980
VERSION     XP_016707980.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="phosphoprotein ECPP44"
                     /calculated_mol_wt=22293
     Region          <125..184
                     /region_name="Dehydrin"
                     /note="pfam00257"
                     /db_xref="CDD:425561"
     CDS             1..199
                     /gene="LOC107922447"
                     /coded_by="XM_016852491.2:685..1284"
                     /db_xref="GeneID:107922447"
ORIGIN      
        1 maeehtkvgg eeavaskerg mfdflgkkee ekpqpqeevv stqfekvkie eehkedekkh
       61 slldklhrsn sssssssdee egegeggekk kkkkekkgkk eedsavpvek cdeaatvhhs
      121 etpekkgfme kikdklpgqh kkdeevttpp paaaaptend hhegetkekk gflekikeki
      181 pgyhsktede kekettaph
//
LOCUS       XP_016708024             388 aa            linear   PLN 06-AUG-2024
DEFINITION  alcohol dehydrogenase-like 7 [Gossypium hirsutum].
ACCESSION   XP_016708024
VERSION     XP_016708024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852535.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..388
                     /product="alcohol dehydrogenase-like 7"
                     /calculated_mol_wt=41861
     Region          15..385
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(54..56,59,184,188,209..214,233..234,238,253,
                     279..280,303..304,329..331)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176261"
     CDS             1..388
                     /gene="LOC107922475"
                     /coded_by="XM_016852535.2:246..1412"
                     /db_xref="GeneID:107922475"
ORIGIN      
        1 medgksssqs agkpirckaa icreageplv ieeimvappc pyevririic tslcysditf
       61 wkltvppacv prilgheavg vvesvgenvn evapgdvvip tflsecgece dccskrsnlc
      121 skfpfkihpw mpryensrft dlkgevlyhf lfvssfseyt vvdinhvvki dpaippnrac
      181 lfgcciatgv gaackvanve agstvvifgl gsiglavakg aklcganrii gvdvnpdkfe
      241 iakkfgvtef inskdcgnes lsqvakemtg ggadycfecv glaslvqeay ascrkgwgkt
      301 ivlgvqkpgs qlslssfevl hsgktltgal fggvkaksdl plllkrytdn elqvdefvth
      361 evkfqdinra fellmggkci rcviwmdk
//
LOCUS       XP_016707749             664 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma-tubulin complex component 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707749
VERSION     XP_016707749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852260.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="gamma-tubulin complex component 2 isoform X1"
                     /calculated_mol_wt=75451
     Region          29..320
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          323..>575
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..664
                     /gene="LOC107922291"
                     /coded_by="XM_016852260.2:255..2249"
                     /db_xref="GeneID:107922291"
ORIGIN      
        1 mglvenyely eilglhifgr kmqhelilid dllfalvgie gryisikrvh gkadvvsfqv
       61 dssmdlalqe fakrifplce syllidefve srsqfkhglv nhafaaalra flldyqamva
      121 qlehqfrlrr lsiqglwfyc qpmtgsmqal stvirkvsan nyagsavlnl lqsqakamag
      181 dsavrsllek mthsasnayl silerwiyeg viddpydeff iaenkslqke sltqdydaky
      241 wrqryslkkd ipsflaniag tilttgkyln vmrecgynvq vpvsensklm tfgsnhqyle
      301 cvkaayefas gellslikek ydligklrsi khyllldqgd flvhfmdiar eellkkhdei
      361 sveklqslld lalrttaaaa dpchedltcc verssvlkgl srlkdldikn vshgndleep
      421 isitgletfs lsykiqwpls ivisrkaltk yqlifrflfh ckhverqlcg awqmhqgvra
      481 lnshgtaisr ssllcrsmlr finsllhylt fevlepnwhv mhgrlqtaks ideviqhhdf
      541 fldkclkecl lllpelikkv eklkslclqy aaatqwlisl sidipkldeq sdgsvgsgkl
      601 ksknpsqvqk vmtrnsavtd silkferefn aelqslrpil ssssqaepyl thlaqwilga
      661 gndq
//
LOCUS       XP_040943137             642 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma-tubulin complex component 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943137
VERSION     XP_040943137.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087203.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..642
                     /product="gamma-tubulin complex component 2 isoform X2"
                     /calculated_mol_wt=72821
     Region          12..298
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          301..>553
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..642
                     /gene="LOC107922291"
                     /coded_by="XM_041087203.1:244..2172"
                     /db_xref="GeneID:107922291"
ORIGIN      
        1 mleliliddl lfalvgiegr yisikrvhgk advvsfqvds smdlalqefa krifplcesy
       61 llidefvesr sqfkhglvnh afaaalrafl ldyqamvaql ehqfrlrrls iqglwfycqp
      121 mtgsmqalst virkvsanny agsavlnllq sqakamagds avrsllekmt hsasnaylsi
      181 lerwiyegvi ddpydeffia enkslqkesl tqdydakywr qryslkkdip sflaniagti
      241 lttgkylnvm recgynvqvp vsensklmtf gsnhqylecv kaayefasge llslikekyd
      301 ligklrsikh yllldqgdfl vhfmdiaree llkkhdeisv eklqslldla lrttaaaadp
      361 chedltccve rssvlkglsr lkdldiknvs hgndleepis itgletfsls ykiqwplsiv
      421 isrkaltkyq lifrflfhck hverqlcgaw qmhqgvraln shgtaisrss llcrsmlrfi
      481 nsllhyltfe vlepnwhvmh grlqtaksid eviqhhdffl dkclkeclll lpelikkvek
      541 lkslclqyaa atqwlislsi dipkldeqsd gsvgsgklks knpsqvqkvm trnsavtdsi
      601 lkferefnae lqslrpilss ssqaepylth laqwilgagn dq
//
LOCUS       XP_016707750             606 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma-tubulin complex component 2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707750
VERSION     XP_016707750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852261.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..606
                     /product="gamma-tubulin complex component 2 isoform X3"
                     /calculated_mol_wt=68836
     Region          29..276
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          280..>517
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..606
                     /gene="LOC107922291"
                     /coded_by="XM_016852261.2:255..2075"
                     /db_xref="GeneID:107922291"
ORIGIN      
        1 mglvenyely eilglhifgr kmqhelilid dllfalvgie gryisikrvh gkadvvsfqv
       61 dssmdlalqe fakrifplce syllidefve srsqfkhglv nhafaaalra flldyqamva
      121 qlehqfrlrr lsiqglwfyc qpmtgsmqal stvirkvsan nyagsavlnl lqsqakamag
      181 dsavrsllek mthsasnayl silerwiyeg viddpydeff iaenkslqke sltqdydaky
      241 wrqryslkkd ipsflaniag tilttgkyln vmrecgynvq gdflvhfmdi areellkkhd
      301 eisveklqsl ldlalrttaa aadpchedlt ccverssvlk glsrlkdldi knvshgndle
      361 episitglet fslsykiqwp lsivisrkal tkyqlifrfl fhckhverql cgawqmhqgv
      421 ralnshgtai srssllcrsm lrfinsllhy ltfevlepnw hvmhgrlqta ksideviqhh
      481 dffldkclke cllllpelik kveklkslcl qyaaatqwli slsidipkld eqsdgsvgsg
      541 klksknpsqv qkvmtrnsav tdsilkfere fnaelqslrp ilssssqaep ylthlaqwil
      601 gagndq
//
LOCUS       XP_016706273             541 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_016706273
VERSION     XP_016706273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850784.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..541
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=60081
     Region          16..538
                     /region_name="PLN02991"
                     /note="oxidoreductase"
                     /db_xref="CDD:215536"
     CDS             1..541
                     /gene="LOC107920953"
                     /coded_by="XM_016850784.2:383..2008"
                     /db_xref="GeneID:107920953"
ORIGIN      
        1 mqlhlavvll cataglfaia gaedpyrffd wnvtfgdiyp lgvrqtgili ngqfpgpdih
       61 svtndnliin vhnslnepfl iswsgiqqrr nsyedgvygt tcpippgknf tyilqvkdqi
      121 gsffyfpsla fhkaaggfgg irilsrprip vpfpdpagdy tvligdwyks nhtnlkarld
      181 rgkklpfpdg ilingrgpgg asfnveqgkt yrlrisnvgl qnslnfriqn hrltlveveg
      241 thtlqttyss idlhlgqscs vlfkadqpak dyyiavstrf tsrvltstai lrysnsagpv
      301 sgpppggpti qidwslnqar sirtnltasg prpnpqgsyh yglinttrti rlansagqvn
      361 gkqryavnsv sfvpadtplk ladyfkiggv fhvgsisdnp yggkiyldts vmqadyrafi
      421 eivfqnneni vqswhldgys ffvvgmdggq wttasrreyn lrdavsrctt qvypkswtai
      481 yvaldnvgmw nlrsefwarq ylgqqfylrv yttstslrde ypipknallc grasgrhtrp
      541 l
//
LOCUS       XP_016706517             734 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl endopeptidase [Gossypium hirsutum].
ACCESSION   XP_016706517
VERSION     XP_016706517.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851028.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..734
                     /product="prolyl endopeptidase"
                     /calculated_mol_wt=82820
     Region          13..729
                     /region_name="PreP"
                     /note="Prolyl endopeptidase PreP, S9A serine peptidase
                     family [Amino acid transport and metabolism]; COG1505"
                     /db_xref="CDD:441114"
     CDS             1..734
                     /gene="LOC107921155"
                     /coded_by="XM_016851028.2:90..2294"
                     /db_xref="GeneID:107921155"
ORIGIN      
        1 mgslgffeep fgplkypkpr rdesvvddyh gfkvadpyrw ledcdaeevk efvkkqvalt
       61 esvlekcetr gklhnkitnl fdhprysvpf krgnkyfyfh ntglqaqnvl ymqdglegkp
      121 evlldpntls ddgtvsfkal sisenakyla yglsssgsdw vtikvmried ktvepdslsw
      181 vkfsdiswth dskgffysry papkdgenfy sgiqtnvnvn helyyhflgt iqsedilcwr
      241 dpenpkhmfs gkvtddgkyi vlyidegcgp vnklylcdms tlpgglqgfr erngplpfvk
      301 lidkfdaqyi nvanddswft fmtnkdapky klvrvdlkep gkwidvipen ekdvlesacv
      361 vngnqiitsy lsdvkyviqv rdletgsmlh nlpidigtvy gisarredsi vfigftsflt
      421 pgiiyqcnlg tkfpemkifr eisvlgfdrs efkvnqvfvp skdgtkipmf ivgrkdlnld
      481 gshpcllygy ggfnvsltps fsvsrivlar higaffcian irgggeygee whkagalskk
      541 qtcfddfisa aeylissgyt mpeklciegg snggllvgac inqrpelfgc alahvgvmdm
      601 lrfhkftigh awtcdfgcsd keedfnrlik ysplhnvrrp weklpgrmlq ypstmlltad
      661 hddrvvplhs lkmlatmqhv lctslensrq tnpivgriec kaghgcgrpt hklideaadr
      721 ysfmakvlga swie
//
LOCUS       XP_016702934             714 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g33680 [Gossypium
            hirsutum].
ACCESSION   XP_016702934
VERSION     XP_016702934.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847445.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702934.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..714
                     /product="pentatricopeptide repeat-containing protein
                     At2g33680"
                     /calculated_mol_wt=78754
     Region          9..700
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          45..70
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          74..103
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          109..173
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          175..204
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          245..269
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          278..305
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          311..340
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          379..406
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          480..507
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          513..542
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          549..573
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..714
                     /gene="LOC107917981"
                     /coded_by="XM_016847445.2:499..2643"
                     /db_xref="GeneID:107917981"
ORIGIN      
        1 mtspryrscf selvqctkqk nllrgravha rivkdgsacc vylsnslvnl yakcgdlfha
       61 krvfdniqdk dvvswnclin gysqqgltgs slvmelfkrm raenvlpnsh tfagvftaas
      121 slsdvlsglq ahtlaiktds fgdvfvgssl lnmycksgam aearkvfdgm pernsvswat
      181 misgyamqrs aveafeifkl mrlkdekene yalssilsal adpeflstgs qmhcltvkng
      241 llvfvsvgna lvtmyakcgs lddalktfel sgdknsitws aiitgysqsg dsckalklfs
      301 nmhlagiips eftlvgvlna csdtaavgeg kqvhgyllkl gyesqvyimt alvdmyakcg
      361 stldarkgfd ylqepdmvlw tsmiggyvqn genenamnly armriegimp neltmasilk
      421 acsclaaleq gkqihactik hgfgleipig salstmyakc gsledgsivf srmprrdivs
      481 wnamisglaq nghgnealel fedmqlegte pdyvtfvnil sacshmglvk rgrayfdmms
      541 dkfgivprve hyacmvdmlg ragmldeake fiesatidhg mclwrillsa crnfrnyelg
      601 ayageklmel gsqessayvl lssnyialgr ledvervrrm mrfrgvnkep gcswielkdg
      661 vhvfvvrdqm hpeiktiree lrilskqikd egyhppdsvs antcndeelv aaft
//
LOCUS       XP_040943139             207 aa            linear   PLN 06-AUG-2024
DEFINITION  ganglioside-induced differentiation-associated-protein 2 [Gossypium
            hirsutum].
ACCESSION   XP_040943139
VERSION     XP_040943139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087205.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="ganglioside-induced
                     differentiation-associated-protein 2"
                     /calculated_mol_wt=23939
     Region          34..170
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..207
                     /gene="LOC121213879"
                     /coded_by="XM_041087205.1:91..714"
                     /db_xref="GeneID:121213879"
ORIGIN      
        1 msnisssftl sqsqqqhlle kldvfkvkgr dkrgrnvlli igkyfparmv ssevlkkyle
       61 etiypklgak pfsvvyvhtd vqksenfpgi svlrsvsdai pmnlknnlev vyflhpglqa
      121 rlflatfgrl ffdgglyskl kyvsrleflw dhvrrlemki pdfvhdhdee leyhpmmdyg
      181 lesdhprvyt eppsmdpism ysmrcia
//
LOCUS       XP_040943140             853 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D delta isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943140
VERSION     XP_040943140.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087206.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..853
                     /product="phospholipase D delta isoform X1"
                     /calculated_mol_wt=96618
     Region          1..853
                     /region_name="PLN03008"
                     /note="Phospholipase D delta"
                     /db_xref="CDD:178585"
     CDS             1..853
                     /gene="LOC107917379"
                     /coded_by="XM_041087206.1:388..2949"
                     /db_xref="GeneID:107917379"
ORIGIN      
        1 mgedvsdpvv flhgdldlki tearclpnmd lmaerlrrcf tvfdvckapc trgkkknhrh
       61 hniitsdpyv tvclagatva rtrvisnsqn piwnerfkla lahptsqief hvkdndlfga
      121 dligvatvpa vkvlsgetis gwfpiigsyg kppkpdcavh lemrfikcee mpsyrygmaa
      181 nptefgirnc yfpvrhggsv tlyqdahiqe smvpeielen gtvfkhescw edichailea
      241 hhlvyiagws ifsqvklvre ptrplpnsgn lslgdllkyk seegvrvlll vwddktshsk
      301 ffintagvmq thdeetrkff khssvscvls pryassklsi fkqqdvvwhv iqvvgtlfth
      361 hqkcvivdsq asgnnrkita fvggldlcdg rydtpehrlf rdldtvfqnd yhnptfsagt
      421 kgprqpwhdl hckvegpaay diltnfeqrw rkatkwsefg lkfkrvsrwh ddslikleri
      481 swilspsaki anddpslwvs keedpenwht qvfrsidsgs vkgfpknvfe aesrnlvcak
      541 nlvidksiqt ayvqairaaq hfiyienqyf igssygwpsy kdsgaqnlip melalkitsk
      601 irakerfavy ivipmwpegd ptsasvqeil cwqaqtiqmm ygvvaqelks mgienshpqd
      661 ylnfyclgnr eevpkssgps ssqcnhsetv sasqkfqrfm vyvhakgmiv ddeymilgsa
      721 ninerslags rdteiavgay qpyytwgerk rhphgqiygy rmslwaehme kvddlfkepe
      781 sldcvkavnn iaeenwksyt seaftqlqgh llkypievds ngkvshlpgq eafpdvggki
      841 lgtrttlprs ltt
//
LOCUS       XP_040943142             845 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D delta isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943142
VERSION     XP_040943142.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087208.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..845
                     /product="phospholipase D delta isoform X2"
                     /calculated_mol_wt=95641
     Region          1..845
                     /region_name="PLN03008"
                     /note="Phospholipase D delta"
                     /db_xref="CDD:178585"
     CDS             1..845
                     /gene="LOC107917379"
                     /coded_by="XM_041087208.1:415..2952"
                     /db_xref="GeneID:107917379"
ORIGIN      
        1 mgedvsdpvv flhgdldlki tearclpnmd lmaerlrrcf tvfdvckapc trgkkknhrh
       61 hniitsdpyv tvclagatva rtrvisnsqn piwnerfkla lahptsqief hvkdndlfga
      121 dligvatvpa vkvlsgetis gwfpiigsyg kppkpdcavh lemrfikcee mpsyrygmaa
      181 nptefgirnc yfpvrhggsv tlyqdahiqe smvpeielen gtvfkhescw edichailea
      241 hhlvyiagws ifsqvklvre ptrplpnsgn lslgdllkyk seegvrvlll vwddktshsk
      301 ffintagvmq thdeetrkff khssvscvls pryassklsi fkqqvvgtlf thhqkcvivd
      361 sqasgnnrki tafvggldlc dgrydtpehr lfrdldtvfq ndyhnptfsa gtkgprqpwh
      421 dlhckvegpa aydiltnfeq rwrkatkwse fglkfkrvsr whddslikle riswilspsa
      481 kianddpslw vskeedpenw htqvfrsids gsvkgfpknv feaesrnlvc aknlvidksi
      541 qtayvqaira aqhfiyienq yfigssygwp sykdsgaqnl ipmelalkit skirakerfa
      601 vyivipmwpe gdptsasvqe ilcwqaqtiq mmygvvaqel ksmgienshp qdylnfyclg
      661 nreevpkssg psssqcnhse tvsasqkfqr fmvyvhakgm ivddeymilg saninersla
      721 gsrdteiavg ayqpyytwge rkrhphgqiy gyrmslwaeh mekvddlfke pesldcvkav
      781 nniaeenwks ytseaftqlq ghllkypiev dsngkvshlp gqeafpdvgg kilgtrttlp
      841 rsltt
//
LOCUS       XP_040943143             439 aa            linear   PLN 06-AUG-2024
DEFINITION  hippocampus abundant transcript-like protein 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943143
VERSION     XP_040943143.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087209.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..439
                     /product="hippocampus abundant transcript-like protein 1
                     isoform X1"
                     /calculated_mol_wt=47718
     Region          10..423
                     /region_name="MFS_SLC46_TetA_like"
                     /note="Eukaryotic Solute carrier 46 (SLC46) family,
                     Bacterial Tetracycline resistance proteins, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; cd17330"
                     /db_xref="CDD:340888"
     Site            order(17..18,21..22,25,65,118..119,121..123,128,147,
                     150..151,154,250,253..254,257..259,262,290,294,343..344,
                     348,352,368,371..372,375..376,379)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340888"
     CDS             1..439
                     /gene="LOC107916544"
                     /coded_by="XM_041087209.1:176..1495"
                     /db_xref="GeneID:107916544"
ORIGIN      
        1 mvklpvlthl cftfflynfa tfmtapvivd vtmsalcpge iecslaills gfqqaiiglg
       61 slvmmplign lsdkygrkal ltlpitltii plailaysrs rnffyayyvf kiltsmfceg
      121 svhclslayv adnvpegrra safgilsgig ssafvcgtls trflstastf qvatamgmls
      181 avymrvflpd sivndnlstp imsegkldgi vnqdeesdkk iqmfktlpsi edmlvllkss
      241 ltfsqaaivs ffstlsdvgl hasllyylka rfhfnkdqfa dlmvitgiag tvsqlllmpi
      301 lapvlgeakl lsiglffncv hmilysiaws fwvpyaaalf sllyvfsqpc irsivskqvg
      361 pceqgkaqgf isgigsfanv aspllfsplt alflserapf nfpgfsimcv gfasmiafvq
      421 slmirafppi sservsnlh
//
LOCUS       XP_040943144             439 aa            linear   PLN 06-AUG-2024
DEFINITION  hippocampus abundant transcript-like protein 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943144
VERSION     XP_040943144.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087210.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..439
                     /product="hippocampus abundant transcript-like protein 1
                     isoform X2"
                     /calculated_mol_wt=47678
     Region          10..423
                     /region_name="MFS_SLC46_TetA_like"
                     /note="Eukaryotic Solute carrier 46 (SLC46) family,
                     Bacterial Tetracycline resistance proteins, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; cd17330"
                     /db_xref="CDD:340888"
     Site            order(17..18,21..22,25,65,118..119,121..123,128,147,
                     150..151,154,250,253..254,257..259,262,290,294,343..344,
                     348,352,368,371..372,375..376,379)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340888"
     CDS             1..439
                     /gene="LOC107916544"
                     /coded_by="XM_041087210.1:113..1432"
                     /db_xref="GeneID:107916544"
ORIGIN      
        1 meklsglshl fmtiflhnfa afmvipaitd vtmaalcpgk decsiaiyfs glqhaiiglg
       61 slvmmplign lsdkygrkal ltlpitltii plailaysrs rnffyayyvf kiltsmfceg
      121 svhclslayv adnvpegrra safgilsgig ssafvcgtls trflstastf qvatamgmls
      181 avymrvflpd sivndnlstp imsegkldgi vnqdeesdkk iqmfktlpsi edmlvllkss
      241 ltfsqaaivs ffstlsdvgl hasllyylka rfhfnkdqfa dlmvitgiag tvsqlllmpi
      301 lapvlgeakl lsiglffncv hmilysiaws fwvpyaaalf sllyvfsqpc irsivskqvg
      361 pceqgkaqgf isgigsfanv aspllfsplt alflserapf nfpgfsimcv gfasmiafvq
      421 slmirafppi sservsnlh
//
LOCUS       XP_040943145             439 aa            linear   PLN 06-AUG-2024
DEFINITION  hippocampus abundant transcript-like protein 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943145
VERSION     XP_040943145.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087211.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..439
                     /product="hippocampus abundant transcript-like protein 1
                     isoform X1"
                     /calculated_mol_wt=47718
     Region          10..423
                     /region_name="MFS_SLC46_TetA_like"
                     /note="Eukaryotic Solute carrier 46 (SLC46) family,
                     Bacterial Tetracycline resistance proteins, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; cd17330"
                     /db_xref="CDD:340888"
     Site            order(17..18,21..22,25,65,118..119,121..123,128,147,
                     150..151,154,250,253..254,257..259,262,290,294,343..344,
                     348,352,368,371..372,375..376,379)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340888"
     CDS             1..439
                     /gene="LOC107916544"
                     /coded_by="XM_041087211.1:176..1495"
                     /db_xref="GeneID:107916544"
ORIGIN      
        1 mvklpvlthl cftfflynfa tfmtapvivd vtmsalcpge iecslaills gfqqaiiglg
       61 slvmmplign lsdkygrkal ltlpitltii plailaysrs rnffyayyvf kiltsmfceg
      121 svhclslayv adnvpegrra safgilsgig ssafvcgtls trflstastf qvatamgmls
      181 avymrvflpd sivndnlstp imsegkldgi vnqdeesdkk iqmfktlpsi edmlvllkss
      241 ltfsqaaivs ffstlsdvgl hasllyylka rfhfnkdqfa dlmvitgiag tvsqlllmpi
      301 lapvlgeakl lsiglffncv hmilysiaws fwvpyaaalf sllyvfsqpc irsivskqvg
      361 pceqgkaqgf isgigsfanv aspllfsplt alflserapf nfpgfsimcv gfasmiafvq
      421 slmirafppi sservsnlh
//
LOCUS       XP_040943146             360 aa            linear   PLN 06-AUG-2024
DEFINITION  hippocampus abundant transcript-like protein 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943146
VERSION     XP_040943146.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087212.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..360
                     /product="hippocampus abundant transcript-like protein 1
                     isoform X3"
                     /calculated_mol_wt=39322
     Region          <13..344
                     /region_name="MFS_SLC46_TetA_like"
                     /note="Eukaryotic Solute carrier 46 (SLC46) family,
                     Bacterial Tetracycline resistance proteins, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; cd17330"
                     /db_xref="CDD:340888"
     Site            order(39..40,42..44,49,68,71..72,75,171,174..175,178..180,
                     183,211,215,264..265,269,273,289,292..293,296..297,300)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340888"
     CDS             1..360
                     /gene="LOC107916544"
                     /coded_by="XM_041087212.1:297..1379"
                     /db_xref="GeneID:107916544"
ORIGIN      
        1 mlpryitlwi stsailaysr srnffyayyv fkiltsmfce gsvhclslay vadnvpegrr
       61 asafgilsgi gssafvcgtl strflstast fqvatamgml savymrvflp dsivndnlst
      121 pimsegkldg ivnqdeesdk kiqmfktlps iedmlvllks sltfsqaaiv sffstlsdvg
      181 lhasllyylk arfhfnkdqf adlmvitgia gtvsqlllmp ilapvlgeak llsiglffnc
      241 vhmilysiaw sfwvpyaaal fsllyvfsqp cirsivskqv gpceqgkaqg fisgigsfan
      301 vaspllfspl talflserap fnfpgfsimc vgfasmiafv qslmirafpp isservsnlh
//
LOCUS       XP_016707924             486 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit B2 [Gossypium hirsutum].
ACCESSION   XP_016707924
VERSION     XP_016707924.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852435.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..486
                     /product="V-type proton ATPase subunit B2"
                     /calculated_mol_wt=54158
     Region          20..486
                     /region_name="V-ATPase_V1_B"
                     /note="V-type (H+)-ATPase V1, B subunit; TIGR01040"
                     /db_xref="CDD:273410"
     CDS             1..486
                     /gene="LOC107922407"
                     /coded_by="XM_016852435.2:175..1635"
                     /db_xref="GeneID:107922407"
ORIGIN      
        1 mgaeknfidm eegtleigme yrtvsgvagp lvildkvkgp kyqeivnirl gdgttrrgqv
       61 levdgekavv qvfegtsgid nkyttvqftg evlktpvsld mlgrifngsg kpidngppil
      121 peayldisgs sinpsertyp eemiqtgist idvmnsiarg qkiplfsaag lphneiaaqi
      181 crqaglvkrl eksdnllddq eednfaivfa amgvnmetaq ffkrdfeeng smervtlfln
      241 landptieri itprialtta eylayecgkh vlviltdmss yadalrevsa areevpgrrg
      301 ypgymytdla tiyeragrie grkgsitqip iltmpnddit hptpdltgyi tegqiyidrq
      361 lhnrqiyppi nvlpslsrlm ksaigegmtr rdhadvsnql yanyaigkdv qamkavvgee
      421 alssedllyl efldkferkf vtqgaydtrn ifqsldlawt llrifprell hripaktldq
      481 yysres
//
LOCUS       XP_040943147             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943147
VERSION     XP_040943147.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087213.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15494
     CDS             1..138
                     /gene="LOC107921216"
                     /coded_by="XM_041087213.1:1213..1629"
                     /db_xref="GeneID:107921216"
ORIGIN      
        1 mhsvsreree flglvnkeie lynsmvdkkg tdgekdaika yrvareetdh sgevsdsdev
       61 ssvliekvda mlqnlekeid dvdakigdrw rvpdrdhdgk vtpeevattt qylkdtlgke
      121 gvqdgnllir nkcfnlti
//
LOCUS       XP_016706584             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706584
VERSION     XP_016706584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851095.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15494
     CDS             1..138
                     /gene="LOC107921216"
                     /coded_by="XM_016851095.2:677..1093"
                     /db_xref="GeneID:107921216"
ORIGIN      
        1 mhsvsreree flglvnkeie lynsmvdkkg tdgekdaika yrvareetdh sgevsdsdev
       61 ssvliekvda mlqnlekeid dvdakigdrw rvpdrdhdgk vtpeevattt qylkdtlgke
      121 gvqdgnllir nkcfnlti
//
LOCUS       XP_016706585             114 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706585
VERSION     XP_016706585.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851096.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12632
     CDS             1..114
                     /gene="LOC107921216"
                     /coded_by="XM_016851096.2:193..537"
                     /db_xref="GeneID:107921216"
ORIGIN      
        1 mvdkkgtdge kdaikayrva reetdhsgev sdsdevssvl iekvdamlqn lekeiddvda
       61 kigdrwrvpd rdhdgkvtpe evatttqylk dtlgkegvqd gnllirnkcf nlti
//
LOCUS       XP_016707341             447 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation factor 1-alpha [Gossypium hirsutum].
ACCESSION   XP_016707341
VERSION     XP_016707341.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707341.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..447
                     /product="elongation factor 1-alpha"
                     /calculated_mol_wt=49164
     Region          1..446
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..447
                     /gene="LOC107922028"
                     /coded_by="XM_016851852.2:151..1494"
                     /db_xref="GeneID:107922028"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk lggidkrvie rfekeaaemn krsfkyawvl
       61 dklkaererg itidialwkf ettkyyctvi dapghrdfik nmitgtsqad cavliidstt
      121 ggfeagiskd gqtrehalla ftlgvkqmic ccnkmdattp kyskarydei vkevssylkk
      181 vgynpdkipf vpisgfegdn mierstnldw ykgptlleal dqinepkrps dkplrlplqd
      241 vykiggigtv pvgrvetgvl kpgmvvtfgp sglttevksv emhhealtea lpgdnvgfnv
      301 knvavkdlkr gfvasnskdd pakeaanfts qviimnhpgq igngyapvld chtshiavkf
      361 aelltkidrr sgkelekepk flkngdagmi kmiptkpmvv etfseypplg rfavrdmrqt
      421 vavgviksve kedptgakvt ksaakkk
//
LOCUS       XP_040943149             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943149
VERSION     XP_040943149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087215.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..144
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16371
     CDS             1..144
                     /gene="LOC121213881"
                     /coded_by="XM_041087215.1:176..610"
                     /db_xref="GeneID:121213881"
ORIGIN      
        1 mkgadpllri gsdhwipllk rrrfsshkgq nktlirasis ffqnemkkkk ikikrmfssl
       61 rrsinrples plafarstpi speekkassa lftdslaisv lfffclfsll fvclsflqvc
      121 ggrtvtwraa yvrwctweva aval
//
LOCUS       XP_016708089             252 aa            linear   PLN 06-AUG-2024
DEFINITION  ribonuclease P protein subunit p25-like protein isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708089
VERSION     XP_016708089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852600.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="ribonuclease P protein subunit p25-like protein
                     isoform X1"
                     /calculated_mol_wt=27773
     Region          19..82
                     /region_name="Alba"
                     /note="pfam01918"
                     /db_xref="CDD:426509"
     CDS             1..252
                     /gene="LOC107922521"
                     /coded_by="XM_016852600.2:344..1102"
                     /db_xref="GeneID:107922521"
ORIGIN      
        1 mdryqrvekp kaetpidene iritsqgrmr syityamtll qekgssqvvf kamgrainkt
       61 vtivelikrr ivglhqitsi gsmditdmwe pleegllple ttrhvsmiti tlskielnts
      121 svgyqpplpa dqvkastevd hegaegspnd rgrgrggrgr lrsrgngfvs aeyedgswdr
      181 trgyargrgr grgrgvrgrg rggyngpqfd rpqdegynfe appqggrgrg rgrgyrgrgr
      241 gfrsngpiha aa
//
LOCUS       XP_016708090             251 aa            linear   PLN 06-AUG-2024
DEFINITION  ribonuclease P protein subunit p25-like protein isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016708090
VERSION     XP_016708090.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852601.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="ribonuclease P protein subunit p25-like protein
                     isoform X2"
                     /calculated_mol_wt=27702
     Region          19..82
                     /region_name="Alba"
                     /note="pfam01918"
                     /db_xref="CDD:426509"
     CDS             1..251
                     /gene="LOC107922521"
                     /coded_by="XM_016852601.2:352..1107"
                     /db_xref="GeneID:107922521"
ORIGIN      
        1 mdryqrvekp kaetpidene iritsqgrmr syityamtll qekgssqvvf kamgrainkt
       61 vtivelikrr ivglhqitsi gsmditdmwe pleegllple ttrhvsmiti tlskielnts
      121 svgyqpplpa dqvkastevd hegegspndr grgrggrgrl rsrgngfvsa eyedgswdrt
      181 rgyargrgrg rgrgvrgrgr ggyngpqfdr pqdegynfea ppqggrgrgr grgyrgrgrg
      241 frsngpihaa a
//
LOCUS       XP_016706403             367 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0496 protein At1g20180 [Gossypium hirsutum].
ACCESSION   XP_016706403
VERSION     XP_016706403.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850914.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..367
                     /product="UPF0496 protein At1g20180"
                     /calculated_mol_wt=42246
     Region          53..362
                     /region_name="DUF677"
                     /note="Protein of unknown function (DUF677); cl21731"
                     /db_xref="CDD:451372"
     CDS             1..367
                     /gene="LOC107921061"
                     /coded_by="XM_016850914.2:109..1212"
                     /db_xref="GeneID:107921061"
ORIGIN      
        1 mirftkitsg rsemrrgsnl sdktnvneey keafrtksyv dmwsqvhgqf nqitsfdtlp
       61 stssipghqi nlseyllkpr qetldkiesl nvhhllldyf dagleacnlc elllrsihqt
      121 rvyyqkirkv ikiskrvqdf sdeqcsvilk elkgfallkn plsiitppqf rkihennldl
      181 frkltskrek ikrkakskki skqigslclv isnttlvial lilafhsmig ivaapgvaaw
      241 fisirkkkkk tgsssiqqgh ntsllerlge qldisakgiy ilindfdtis rlvwrlhdei
      301 ehlkaianmc irngkievlk evvrefrmhn ssfleqlkel eehtklcfht inrsrrhvie
      361 eivdslp
//
LOCUS       XP_016706404             220 aa            linear   PLN 06-AUG-2024
DEFINITION  protein Abitram [Gossypium hirsutum].
ACCESSION   XP_016706404
VERSION     XP_016706404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="protein Abitram"
                     /calculated_mol_wt=24525
     Region          82..216
                     /region_name="Biotinyl_lipoyl_domains"
                     /note="Biotinyl_lipoyl_domains are present in
                     biotin-dependent carboxylases/decarboxylases, the
                     dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
                     dehydrogenases, and the H-protein of the glycine cleavage
                     system (GCS). These domains transport CO2, acyl; cl11404"
                     /db_xref="CDD:448245"
     Region          <162..216
                     /region_name="GcvH"
                     /note="Glycine cleavage system protein H (lipoate-binding)
                     [Amino acid transport and metabolism]; COG0509"
                     /db_xref="CDD:440275"
     CDS             1..220
                     /gene="LOC107921062"
                     /coded_by="XM_016850915.2:99..761"
                     /db_xref="GeneID:107921062"
ORIGIN      
        1 msdvmvdhtq kleetavpnn leqqdkqdee qpqqsvqena eyedeelhkl lvpditqlpl
       61 ippsavefnf asyfapdfmk pgndqyvyrh anglcvvgla sthlafkdkg gitavdfnvg
      121 ksdrsgmkvt gkrkknaqhf esntalckvc tngdsyivrc cvkgsllevn erlikqpell
      181 hssadregyi aiimpkpadw lkvkasllsl eefkklralc
//
LOCUS       XP_016707802             518 aa            linear   PLN 06-AUG-2024
DEFINITION  la-related protein 1C isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707802
VERSION     XP_016707802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="la-related protein 1C isoform X1"
                     /calculated_mol_wt=55775
     Region          <300..362
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          367..436
                     /region_name="LAM"
                     /note="LA motif RNA-binding domain; cd07323"
                     /db_xref="CDD:153396"
     Site            order(370,373..374,379,382..383,385,404..406)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153396"
     CDS             1..518
                     /gene="LOC107922327"
                     /coded_by="XM_016852313.2:347..1903"
                     /db_xref="GeneID:107922327"
ORIGIN      
        1 mamtadpefh hqnlsrwaqv vqgeskatsa snhspssqps sisspvasvp ernissdcsp
       61 sqapcfssss sppldislsa eggsdsknnf aassfkkpaw nkpsngiigv gpvmgaaswp
      121 alsesargsq ksladsskdg llstsqgpii pqstqkqvts nanpnstpnc tmlnrqkssk
      181 rggnssgsgl pqvasshqhp pppppfavpq mppssfgnfv pampypstrd pqyrdnswet
      241 rpiggfasqs hkdhrhssrr ggnygprgdg gynnfwgrre qdrgnygnar dghmqpprap
      301 prgfprpspp avhsfvppqp vrpfmnpigy peymyftmep frgmpsftpa tppmfmpvpe
      361 ppvsalllhq idyyfsddnl vkddflksnm ddqgwvaiyl iagfprvksl tsniqlivds
      421 lrsstvvevq ddkvrrrndw rkwvpyqvst vpgslspggs saemlassfq qitvreestn
      481 qsgagnvnph aedalgrhps dghshlsngd gsegtcln
//
LOCUS       XP_016707803             516 aa            linear   PLN 06-AUG-2024
DEFINITION  la-related protein 1C isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707803
VERSION     XP_016707803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..516
                     /product="la-related protein 1C isoform X2"
                     /calculated_mol_wt=55548
     Region          <300..362
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          367..434
                     /region_name="LAM"
                     /note="LA motif RNA-binding domain; cd07323"
                     /db_xref="CDD:153396"
     Site            order(370,373..374,379,382..383,385,404..406)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153396"
     CDS             1..516
                     /gene="LOC107922327"
                     /coded_by="XM_016852314.2:347..1897"
                     /db_xref="GeneID:107922327"
ORIGIN      
        1 mamtadpefh hqnlsrwaqv vqgeskatsa snhspssqps sisspvasvp ernissdcsp
       61 sqapcfssss sppldislsa eggsdsknnf aassfkkpaw nkpsngiigv gpvmgaaswp
      121 alsesargsq ksladsskdg llstsqgpii pqstqkqvts nanpnstpnc tmlnrqkssk
      181 rggnssgsgl pqvasshqhp pppppfavpq mppssfgnfv pampypstrd pqyrdnswet
      241 rpiggfasqs hkdhrhssrr ggnygprgdg gynnfwgrre qdrgnygnar dghmqpprap
      301 prgfprpspp avhsfvppqp vrpfmnpigy peymyftmep frgmpsftpa tppmfmpvpe
      361 ppvsalllhq idyyfsddnl vkddflksnm ddqgwvaiyl iagfprvksl tsniqlivds
      421 lrsstvvedd kvrrrndwrk wvpyqvstvp gslspggssa emlassfqqi tvreestnqs
      481 gagnvnphae dalgrhpsdg hshlsngdgs egtcln
//
LOCUS       XP_040943151             180 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 27 [Gossypium hirsutum].
ACCESSION   XP_040943151
VERSION     XP_040943151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087217.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="bZIP transcription factor 27"
                     /calculated_mol_wt=19697
     Region          113..165
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          113..164
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(116..117,119..121,123..128,130..132)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(131,134..135,138..139,141..142,145..146,148..149,
                     152..153,155..156,159..160,162..163)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..180
                     /gene="LOC107921457"
                     /coded_by="XM_041087217.1:203..745"
                     /db_xref="GeneID:107921457"
ORIGIN      
        1 meevwgditl aslndhpavt ptanppsfps vilqdflaip inkempptar sgcgtsltee
       61 itlfgslppt patlftlnar siasaavkap apsfpsscrk kgqengensd dprhkrkikn
      121 resaarsrar kqaytnelel evarlleenv klrrqqdkll asprqipkrn tlcrtltapf
//
LOCUS       XP_040943152             180 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 27 [Gossypium hirsutum].
ACCESSION   XP_040943152
VERSION     XP_040943152.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087218.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="bZIP transcription factor 27"
                     /calculated_mol_wt=19697
     Region          113..165
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          113..164
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(116..117,119..121,123..128,130..132)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(131,134..135,138..139,141..142,145..146,148..149,
                     152..153,155..156,159..160,162..163)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..180
                     /gene="LOC107921457"
                     /coded_by="XM_041087218.1:210..752"
                     /db_xref="GeneID:107921457"
ORIGIN      
        1 meevwgditl aslndhpavt ptanppsfps vilqdflaip inkempptar sgcgtsltee
       61 itlfgslppt patlftlnar siasaavkap apsfpsscrk kgqengensd dprhkrkikn
      121 resaarsrar kqaytnelel evarlleenv klrrqqdkll asprqipkrn tlcrtltapf
//
LOCUS       XP_016706761             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable BOI-related E3 ubiquitin-protein ligase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016706761
VERSION     XP_016706761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="probable BOI-related E3 ubiquitin-protein ligase
                     2"
                     /calculated_mol_wt=29422
     Region          <69..208
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          209..243
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(209,212,224,226,230,233,240,243)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..256
                     /gene="LOC107921419"
                     /coded_by="XM_016851272.2:531..1301"
                     /db_xref="GeneID:107921419"
ORIGIN      
        1 mavqaqlcre nmgvplpmcg lqdwmvnpap aapsfqagss lqdvpfhphq naqnlvpmav
       61 sqpldaqlei qrqeidcflq lrnerlryvl reqrkqqqti llksmeskal ylmkrkeeel
      121 aratkkkmel eaclrkveme seswqrlaka neakvmdlnk rleqvresli wvsssaedee
      181 sfyygschrd eeerdnnvqe edskkkmack hcntrsscvl flpcrhlcsc nsceaflvsc
      241 pvcgsereas ikvywv
//
LOCUS       XP_040943153             634 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK15 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943153
VERSION     XP_040943153.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087219.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..634
                     /product="proline-rich receptor-like protein kinase PERK15
                     isoform X1"
                     /calculated_mol_wt=71066
     Region          296..560
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(296..299,302,304,316,318,346,362..365,414,418..419,
                     421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..634
                     /gene="LOC121213884"
                     /coded_by="XM_041087219.1:703..2607"
                     /db_xref="GeneID:121213884"
ORIGIN      
        1 msyasysvkr llpitallgv dkreiileil pvhhlqvfig frlnltsqly lnkisaslry
       61 adqepgseea espvcrtisn vasddigglq ednsipnhng kavllnsisi irrelpepcl
      121 gwpllrrksp anqefkkhad rdtsvvewvl glpnrgttvv dlialhsnqt sinakrnind
      181 syienhkaec naedsvssnm kdlepkskpg wpllritast tsdscsefed tkmpspmver
      241 vmntaiqske ednhvgieks lpalrkmpnd lelrckqfrl relkqatsgf spenligegg
      301 csnvykgflp sgkpvavkil ksykeawsdf slevdivssl rhkhitplig vcvendhlis
      361 vydlfplgsl eeilhgqnkk svlpwevrfk matavaealk ylhnecyphv ihrdvkssni
      421 llsddfqpql sdfglaiwgp mdatnmidsn vvgtfgyiap eyfmegrvsd kidvysfgiv
      481 llellsgrrp isskamekqe slvqwakall errdlpalvd paldgdfdva qlhrmvlaat
      541 lclnqsdihr pkasqilqil rgeqeptegy nlhatymnvp nnqeddglrk lyaylsvpfs
      601 ddddstskcs ysircktgkk rrlmlkeylr kgqc
//
LOCUS       XP_040943154             634 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK15 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943154
VERSION     XP_040943154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087220.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..634
                     /product="proline-rich receptor-like protein kinase PERK15
                     isoform X1"
                     /calculated_mol_wt=71066
     Region          296..560
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(296..299,302,304,316,318,346,362..365,414,418..419,
                     421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..634
                     /gene="LOC121213884"
                     /coded_by="XM_041087220.1:687..2591"
                     /db_xref="GeneID:121213884"
ORIGIN      
        1 msyasysvkr llpitallgv dkreiileil pvhhlqvfig frlnltsqly lnkisaslry
       61 adqepgseea espvcrtisn vasddigglq ednsipnhng kavllnsisi irrelpepcl
      121 gwpllrrksp anqefkkhad rdtsvvewvl glpnrgttvv dlialhsnqt sinakrnind
      181 syienhkaec naedsvssnm kdlepkskpg wpllritast tsdscsefed tkmpspmver
      241 vmntaiqske ednhvgieks lpalrkmpnd lelrckqfrl relkqatsgf spenligegg
      301 csnvykgflp sgkpvavkil ksykeawsdf slevdivssl rhkhitplig vcvendhlis
      361 vydlfplgsl eeilhgqnkk svlpwevrfk matavaealk ylhnecyphv ihrdvkssni
      421 llsddfqpql sdfglaiwgp mdatnmidsn vvgtfgyiap eyfmegrvsd kidvysfgiv
      481 llellsgrrp isskamekqe slvqwakall errdlpalvd paldgdfdva qlhrmvlaat
      541 lclnqsdihr pkasqilqil rgeqeptegy nlhatymnvp nnqeddglrk lyaylsvpfs
      601 ddddstskcs ysircktgkk rrlmlkeylr kgqc
//
LOCUS       XP_040943155             631 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK15 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943155
VERSION     XP_040943155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087221.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..631
                     /product="proline-rich receptor-like protein kinase PERK15
                     isoform X2"
                     /calculated_mol_wt=70706
     Region          293..557
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(293..296,299,301,313,315,343,359..362,411,415..416,
                     418,428..429)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..631
                     /gene="LOC121213884"
                     /coded_by="XM_041087221.1:692..2587"
                     /db_xref="GeneID:121213884"
ORIGIN      
        1 msyasysvkr llpitallgv dkreiileil pvhhlqgfrl nltsqlylnk isaslryadq
       61 epgseeaesp vcrtisnvas ddigglqedn sipnhngkav llnsisiirr elpepclgwp
      121 llrrkspanq efkkhadrdt svvewvlglp nrgttvvdli alhsnqtsin akrnindsyi
      181 enhkaecnae dsvssnmkdl epkskpgwpl lritasttsd scsefedtkm pspmvervmn
      241 taiqskeedn hvgiekslpa lrkmpndlel rckqfrlrel kqatsgfspe nligeggcsn
      301 vykgflpsgk pvavkilksy keawsdfsle vdivsslrhk hitpligvcv endhlisvyd
      361 lfplgsleei lhgqnkksvl pwevrfkmat avaealkylh necyphvihr dvkssnills
      421 ddfqpqlsdf glaiwgpmda tnmidsnvvg tfgyiapeyf megrvsdkid vysfgivlle
      481 llsgrrpiss kamekqeslv qwakallerr dlpalvdpal dgdfdvaqlh rmvlaatlcl
      541 nqsdihrpka sqilqilrge qeptegynlh atymnvpnnq eddglrklya ylsvpfsddd
      601 dstskcsysi rcktgkkrrl mlkeylrkgq c
//
LOCUS       XP_040943156             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943156
VERSION     XP_040943156.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087222.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=34617
     CDS             1..308
                     /gene="LOC121213885"
                     /coded_by="XM_041087222.1:1..927"
                     /db_xref="GeneID:121213885"
ORIGIN      
        1 mkslvirvcl eewelgvcih slidldrtln qceitpsppn fnfleaivif wssipaclnf
       61 ilccaiklqg ekvlpkteqk lhkkrekekk kerkekdktq gaikklkkld dvldaykddq
      121 lersdlteeh eppvcyisdg sqnshkrkre tasynecrvd gniikirfsl kkprasdasi
      181 sseepacsss grtdsiqeps ctvasvpeqk lrhddrrkeq gssssgtlle aalqyktlie
      241 dwmpplleae lndggdedwl ltkkqlgkpa akrpddndht cvasaslhpc ahflpaaeiy
      301 alpytvpf
//
LOCUS       XP_040943157             264 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943157
VERSION     XP_040943157.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087223.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..264
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=29692
     CDS             1..264
                     /gene="LOC121213885"
                     /coded_by="XM_041087223.1:351..1145"
                     /db_xref="GeneID:121213885"
ORIGIN      
        1 msrcfpyqrp agylrqglve siklqgekvl pkteqklhkk rekekkkerk ekdktqgaik
       61 klkklddvld aykddqlers dlteeheppv cyisdgsqns hkrkretasy necrvdgnii
      121 kirfslkkpr asdasissee pacsssgrtd siqepsctva svpeqklrhd drrkeqgsss
      181 sgtlleaalq yktliedwmp plleaelndg gdedwlltkk qlgkpaakrp ddndhtcvas
      241 aslhpcahfl paaeiyalpy tvpf
//
LOCUS       XP_040943159             789 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 35B isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943159
VERSION     XP_040943159.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087225.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..789
                     /product="vacuolar protein sorting-associated protein 35B
                     isoform X1"
                     /calculated_mol_wt=88785
     Region          11..746
                     /region_name="Vps35"
                     /note="Vacuolar protein sorting-associated protein 35;
                     pfam03635"
                     /db_xref="CDD:427414"
     CDS             1..789
                     /gene="LOC121213886"
                     /coded_by="XM_041087225.1:180..2549"
                     /db_xref="GeneID:121213886"
ORIGIN      
        1 mlngtedeek wlaegiagiq hnafymhral dsnnlrealk ysaqmlselr tsklsphkyy
       61 elymrafdel krlelffkdd skhgvsvvdl yelvqhagni lprlyllctv gsiyikskea
      121 pakevlkdlv emcrgvqhpi rglflrsyla qisrdklpdi gseyegdadt vmdavdfvlq
      181 nftemnklwv rmqhqgpggv rekrekerse lqdlvgknlh vlsqiegvdl emyketvlpr
      241 vleqvvnckd dlaqyylmdc iiqvfpdeyh lqtletllga cpqlqptvdv ktvlsrlmdr
      301 lsnyaasstd vlpeflqvea fsklsnaigk vieaqldmpa vgaitlyvsl ltftlrvhpd
      361 rldhvdqvlg acvkklsnip kledsramkq vvallsaple kyndivtalt lsnyprvmdh
      421 ldigtnklma mviiqsimkn nscistadkv evlfelikgl ikdidgadvd eldeedfkee
      481 qnsvarlihm lyndepeeml kiicivrkht mvggpkrlpf tvsslvfsal rllrqlqgqe
      541 gdivgeeasm tpnkifqllt qiieslsavp spelalrlyl qcaeaangcd iehvayefft
      601 qafllyeeei adskaqvtai hliigtlqrm nvfgvenrdt lthkatgysa rllkkadqcr
      661 avyacshlfw vddqdgikdg ervllclkra lrianaaqqm anvargsggp vslfveilnk
      721 yiyffekgnk qitssaiqgl ielintemqs dstnpdsvad aflastlryi qfqkqkggvm
      781 gekfesikl
//
LOCUS       XP_040943160             770 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 35B isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943160
VERSION     XP_040943160.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087226.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..770
                     /product="vacuolar protein sorting-associated protein 35B
                     isoform X2"
                     /calculated_mol_wt=86555
     Region          11..727
                     /region_name="Vps35"
                     /note="Vacuolar protein sorting-associated protein 35;
                     pfam03635"
                     /db_xref="CDD:427414"
     CDS             1..770
                     /gene="LOC121213886"
                     /coded_by="XM_041087226.1:180..2492"
                     /db_xref="GeneID:121213886"
ORIGIN      
        1 mlngtedeek wlaegiagiq hnafymhral dsnnlrealk ysaqmlselr tsklsphkyy
       61 elymrafdel krlelffkdd skhgvsvvdl yelvqhagni lprlyllctv gsiyikskea
      121 pakevlkdlv emcrgvqhpi rglflrsyla qisrdklpdi gseyegdadt vmdavdfvlq
      181 nftemnklwv rmqhqgpggv rekrekerse lqdlvgknlh vlsqiegvdl emyketvlpr
      241 vleqvfpdey hlqtletllg acpqlqptvd vktvlsrlmd rlsnyaasst dvlpeflqve
      301 afsklsnaig kvieaqldmp avgaitlyvs lltftlrvhp drldhvdqvl gacvkklsni
      361 pkledsramk qvvallsapl ekyndivtal tlsnyprvmd hldigtnklm amviiqsimk
      421 nnscistadk vevlfelikg likdidgadv deldeedfke eqnsvarlih mlyndepeem
      481 lkiicivrkh tmvggpkrlp ftvsslvfsa lrllrqlqgq egdivgeeas mtpnkifqll
      541 tqiieslsav pspelalrly lqcaeaangc diehvayeff tqafllyeee iadskaqvta
      601 ihliigtlqr mnvfgvenrd tlthkatgys arllkkadqc ravyacshlf wvddqdgikd
      661 gervllclkr alrianaaqq manvargsgg pvslfveiln kyiyffekgn kqitssaiqg
      721 lielintemq sdstnpdsva daflastlry iqfqkqkggv mgekfesikl
//
LOCUS       XP_040943161             766 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 35B isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943161
VERSION     XP_040943161.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087227.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..766
                     /product="vacuolar protein sorting-associated protein 35B
                     isoform X3"
                     /calculated_mol_wt=86287
     Region          11..723
                     /region_name="Vps35"
                     /note="Vacuolar protein sorting-associated protein 35;
                     pfam03635"
                     /db_xref="CDD:427414"
     CDS             1..766
                     /gene="LOC121213886"
                     /coded_by="XM_041087227.1:180..2480"
                     /db_xref="GeneID:121213886"
ORIGIN      
        1 mlngtedeek wlaegiagiq hnafymhral dsnnlrealk ysaqmlselr tsklsphkyy
       61 elymrafdel krlelffkdd skhgvsvvdl yelvqhagni lprlyllctv gsiyikskea
      121 pakevlkdlv emcrgvqhpi rglflrsyla qisrdklpdi gseyegdadt vmdavdfvlq
      181 nftemnklwv rmqhqgpggv rekrekerse lqdlvgknlh vlsqiegvdl emyketvlpr
      241 vleqvvnckd dlaqyylmdc iiqvfpdeyh lqtletllga cpqlqptvdv ktvlsrlmdr
      301 lsnyaasstd vlpeflqvea fsklsnaigk vieaqldmpa vgaitlyvsl ltftlrvhpd
      361 rldhvdqvlg acvkklsnip kledsramkq vvallsaple kyndivtalt lsnyprvmdh
      421 ldigtnklma mviiqsimkn nscistadkv evlfelikgl ikdidgadvd eldeedfkee
      481 qnsvarlihm lyndepeeml kiicivrkht mvggpkrlpf tvsslvfsal rllrqlqgqe
      541 gdivgeeasm tpnkifqllt qaangcdieh vayefftqaf llyeeeiads kaqvtaihli
      601 igtlqrmnvf gvenrdtlth katgysarll kkadqcravy acshlfwvdd qdgikdgerv
      661 llclkralri anaaqqmanv argsggpvsl fveilnkyiy ffekgnkqit ssaiqgliel
      721 intemqsdst npdsvadafl astlryiqfq kqkggvmgek fesikl
//
LOCUS       XP_040943162             736 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 35B isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040943162
VERSION     XP_040943162.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087228.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..736
                     /product="vacuolar protein sorting-associated protein 35B
                     isoform X4"
                     /calculated_mol_wt=82947
     Region          11..693
                     /region_name="Vps35"
                     /note="Vacuolar protein sorting-associated protein 35;
                     pfam03635"
                     /db_xref="CDD:427414"
     CDS             1..736
                     /gene="LOC121213886"
                     /coded_by="XM_041087228.1:180..2390"
                     /db_xref="GeneID:121213886"
ORIGIN      
        1 mlngtedeek wlaegiagiq hnafymhral dsnnlrealk ysaqmlselr tsklsphkyy
       61 elymrafdel krlelffkdd skhgvsvvdl yelvqhagni lprlyllctv gsiyikskea
      121 pakevlkdlv emcrgvqhpi rglflrsyla qisrdklpdi gseyegdadt vmdavdfvlq
      181 nftemnklwv rmqhqgpggv rekrekerse lqdlvgknlh vlsqiegvdl emyketvlpr
      241 vleqvvnckd dlaqyylmdc iiqvfpdeyh lqtletllga cpqlqptvdv ktvlsrlmdr
      301 lsnyaasstd vlpeflqvea fsklsnaigk vieaqldmpa vgaitlyvsl ltftlrvhpd
      361 rldhvdqvlg acvkklsnip kledsramkq vvallsaple kyndivtalt lsnyprvmdh
      421 ldigtnklma mviiqsimkn nscistadkv evlfelikgl ikdidgadvd eldeedfkee
      481 qnsvarlihm lyndepeeml kiicivrkht mvggpkrlpf tvsslvfsal raangcdieh
      541 vayefftqaf llyeeeiads kaqvtaihli igtlqrmnvf gvenrdtlth katgysarll
      601 kkadqcravy acshlfwvdd qdgikdgerv llclkralri anaaqqmanv argsggpvsl
      661 fveilnkyiy ffekgnkqit ssaiqgliel intemqsdst npdsvadafl astlryiqfq
      721 kqkggvmgek fesikl
//
LOCUS       XP_040943163             630 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar protein sorting-associated protein 35B isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_040943163
VERSION     XP_040943163.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087229.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..630
                     /product="vacuolar protein sorting-associated protein 35B
                     isoform X5"
                     /calculated_mol_wt=70354
     Region          <4..587
                     /region_name="Vps35"
                     /note="Vacuolar protein sorting-associated protein 35;
                     pfam03635"
                     /db_xref="CDD:427414"
     CDS             1..630
                     /gene="LOC121213886"
                     /coded_by="XM_041087229.1:144..2036"
                     /db_xref="GeneID:121213886"
ORIGIN      
        1 mvlssssdad tvmdavdfvl qnftemnklw vrmqhqgpgg vrekrekers elqdlvgknl
       61 hvlsqiegvd lemyketvlp rvleqvvnck ddlaqyylmd ciiqvfpdey hlqtletllg
      121 acpqlqptvd vktvlsrlmd rlsnyaasst dvlpeflqve afsklsnaig kvieaqldmp
      181 avgaitlyvs lltftlrvhp drldhvdqvl gacvkklsni pkledsramk qvvallsapl
      241 ekyndivtal tlsnyprvmd hldigtnklm amviiqsimk nnscistadk vevlfelikg
      301 likdidgadv deldeedfke eqnsvarlih mlyndepeem lkiicivrkh tmvggpkrlp
      361 ftvsslvfsa lrllrqlqgq egdivgeeas mtpnkifqll tqiieslsav pspelalrly
      421 lqcaeaangc diehvayeff tqafllyeee iadskaqvta ihliigtlqr mnvfgvenrd
      481 tlthkatgys arllkkadqc ravyacshlf wvddqdgikd gervllclkr alrianaaqq
      541 manvargsgg pvslfveiln kyiyffekgn kqitssaiqg lielintemq sdstnpdsva
      601 daflastlry iqfqkqkggv mgekfesikl
//
LOCUS       XP_016701939             251 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016701939
VERSION     XP_016701939.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846450.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701939.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27236
     CDS             1..251
                     /gene="LOC107917058"
                     /coded_by="XM_016846450.2:57..812"
                     /db_xref="GeneID:107917058"
ORIGIN      
        1 mddfsmssyn qlnnipkrni gvnfvskrse ylastctihg ggflfappss ltfshppsps
       61 ilnpillyqn hhqlpprlqp pllplptptk plhvslpcrt rslssssckn knnklrdqfl
      121 tpksskskql iisagkvedr pkkdnhlkpk qatetqtisk ssfdmamapa nplgsdpndl
      181 pialpssyra agddakkdld efsgsifpls pppsslplpk fslksklscn peaagidcgd
      241 tdnlrrllcl p
//
LOCUS       XP_016729558             809 aa            linear   PLN 06-AUG-2024
DEFINITION  endoplasmin homolog [Gossypium hirsutum].
ACCESSION   XP_016729558
VERSION     XP_016729558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874069.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..809
                     /product="endoplasmin homolog"
                     /calculated_mol_wt=92359
     Region          84..274
                     /region_name="HATPase_Hsp90-like"
                     /note="Histidine kinase-like ATPase domain of human
                     cytosolic Hsp90 and its homologs including Escherichia
                     coli HtpG, and related domains; cd16927"
                     /db_xref="CDD:340404"
     Site            order(85..86,89,93,170,193)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340404"
     Site            order(104,108..109,111..112,115,150,152,154,156..157,
                     165..166,168..174,191..197,209,211,243..244,246)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340404"
     Site            order(166,197)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340404"
     Region          256..776
                     /region_name="HSP90"
                     /note="Hsp90 protein; pfam00183"
                     /db_xref="CDD:459703"
     CDS             1..809
                     /gene="LOC107940634"
                     /coded_by="XM_016874069.2:144..2573"
                     /db_xref="GeneID:107940634"
ORIGIN      
        1 mgkwtipsal illcllslls dqgrklqana kegavdppkv ednigavphg lqtdsdvvkr
       61 esdsissrsl rnnaekfefq aevsrlmdii inslysnkdi flrelisnas daldkirfls
      121 ltdkevlgeg dtskleiqik ldkekkmlsl rdrgigmtke dliknlgtia ksgtsafvek
      181 mqstgdlnli gqfgvgfysv ylvadyvevi skhnddkqyv weskadgafa isedtwnepl
      241 grgteirlhl rdeaqeylee sklkelvkky sefinfpiyi waskevdvev padedessde
      301 essdrtssee gedeadksed edtekkktvk ettyewerln dvkaiwlrsp kdvtneeyvk
      361 fyhsltkdfs dekpmawshf taegdvefka vlfvppkaph nlyqsyynsn ksnlklyvrr
      421 vfisdefdel lpkflsflmg lvdsdtlpln vsremlqahs slktikkklv rkaldmirri
      481 adedpdefsg kdekdveksg dedekkgqyt kfwneygksi klgiiedatn rnrlakllrf
      541 estksdgklt sldqyisrmk sgqkdifyit giskeqleks pflerlkkkn yevifftdpv
      601 deylmqylmd yegkqfqnvs kdglkigkds ksrelkdsfk eltkwwkgtl ktedvdevki
      661 snrldntpcv vvtskfgwsa nmerlmqaqt ltdaskqaym rgkrileinp rhpiikelre
      721 rvvkdpedeg vkqtaqliyq talmesgfil sdpkdfasri yssvksslni spdatieeed
      781 dveetetepe tkagkdgada essglkdel
//
LOCUS       XP_016729550             333 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016729550
VERSION     XP_016729550.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729550.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..333
                     /product="thaumatin-like protein 1"
                     /calculated_mol_wt=35252
     Region          59..266
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..333
                     /gene="LOC107940629"
                     /coded_by="XM_016874061.2:18..1019"
                     /db_xref="GeneID:107940629"
ORIGIN      
        1 msllssnspp sisvsvsshr knninsilvq meflffsiyl lslisffhgt sgttftlvnk
       61 cdytvwpgil gntqldstgf elpsggsrsf qappswsgrf wgrtgcasdq ttgqlicqtg
      121 dcgstqiecn grgatppatl aefttgsgtq dfydvslvdg fnlpmiveps gglgmcfstg
      181 cindlnrqcp telrvdsgea cksaceafgt peyccsgpya tpdtckpsvy semfkaacpk
      241 aysyayddat stftctgady titfcpssts qksesnaipt tattygsitg sgevsseekg
      301 swlpylltgd sskslsdavf httllaiflv fla
//
LOCUS       XP_016729552             332 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogenesis-related thaumatin-like protein 3.5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016729552
VERSION     XP_016729552.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729552.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..332
                     /product="pathogenesis-related thaumatin-like protein 3.5
                     isoform X1"
                     /calculated_mol_wt=34920
     Region          45..261
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..332
                     /gene="LOC107940632"
                     /coded_by="XM_016874063.2:108..1106"
                     /db_xref="GeneID:107940632"
ORIGIN      
        1 mlkfayppnf ilfmaqitfl aavcalllsh sfisgvqgts ftivnkcnyv vwpgvlsnag
       61 vstisttgft lrrgesktis apaswggrfw grthcsldsa gkfscltgdc asgklecsgn
      121 gaappatlae ftldgaggld ffdvslvdgy nvpmlvvpqg gtgqnctytg cvvdlndscp
      181 selkvmkreg gdgvacksac eafrqpqycc sgaygtpdtc kassysevfk racpraysya
      241 yddksstftc akadytitfc pspntsqkss segqntetps tttlingtmv yegaldesaa
      301 spsifphvfg shaiavtfti tiaiscscqr lf
//
LOCUS       XP_016729553             290 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogenesis-related thaumatin-like protein 3.5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016729553
VERSION     XP_016729553.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729553.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="pathogenesis-related thaumatin-like protein 3.5
                     isoform X2"
                     /calculated_mol_wt=30659
     Region          45..261
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..290
                     /gene="LOC107940632"
                     /coded_by="XM_016874064.2:108..980"
                     /db_xref="GeneID:107940632"
ORIGIN      
        1 mlkfayppnf ilfmaqitfl aavcalllsh sfisgvqgts ftivnkcnyv vwpgvlsnag
       61 vstisttgft lrrgesktis apaswggrfw grthcsldsa gkfscltgdc asgklecsgn
      121 gaappatlae ftldgaggld ffdvslvdgy nvpmlvvpqg gtgqnctytg cvvdlndscp
      181 selkvmkreg gdgvacksac eafrqpqycc sgaygtpdtc kassysevfk racpraysya
      241 yddksstftc akadytitfc pspntsfvsq vkvggkmlrc infgwgffng
//
LOCUS       XP_016729554             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729554
VERSION     XP_016729554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874065.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..305
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=35165
     Region          83..264
                     /region_name="DUF615"
                     /note="Protein of unknown function (DUF615); pfam04751"
                     /db_xref="CDD:461418"
     CDS             1..305
                     /gene="LOC107940633"
                     /coded_by="XM_016874065.2:564..1481"
                     /db_xref="GeneID:107940633"
ORIGIN      
        1 marlirslrq wpplqlqqqy hccsriltvs tktpvhcfsf atstssrrna rlrprgtrlp
       61 napstsdlre neisddsesd vkksrnqkkr earravrwgm dlasfstpqi klilrassle
      121 qdvfdalmlv kvfvfllqrl gpdvregkrr qfnyigkllr evepelmevl iqatkvgdqk
      181 tlqalagset qiieeedeee edddddqfey sqsqefvnta nrwfdglisk dieitnevfs
      241 vssvdfdrqe lrklvrrvqt sqeqsqnvse eekakieaav rsarksltrf lrtlakqltt
      301 eesfd
//
LOCUS       XP_016729555             304 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729555
VERSION     XP_016729555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874066.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..304
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=35037
     Region          83..263
                     /region_name="DUF615"
                     /note="Protein of unknown function (DUF615); pfam04751"
                     /db_xref="CDD:461418"
     CDS             1..304
                     /gene="LOC107940633"
                     /coded_by="XM_016874066.2:564..1478"
                     /db_xref="GeneID:107940633"
ORIGIN      
        1 marlirslrq wpplqlqqqy hccsriltvs tktpvhcfsf atstssrrna rlrprgtrlp
       61 napstsdlre neisddsesd vkksrnqkkr earravrwgm dlasfstpqi klilrassle
      121 qdvfdalmlv kvfvfllqrl gpdvregkrr qfnyigkllr evepelmevl iqatkvgdqk
      181 tlqalagset qiieeedeee edddddqfey ssqefvntan rwfdgliskd ieitnevfsv
      241 ssvdfdrqel rklvrrvqts qeqsqnvsee ekakieaavr sarksltrfl rtlakqltte
      301 esfd
//
LOCUS       XP_016729557             298 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0307 protein ECA0281 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016729557
VERSION     XP_016729557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..298
                     /product="UPF0307 protein ECA0281 isoform X3"
                     /calculated_mol_wt=34318
     Region          83..257
                     /region_name="DUF615"
                     /note="Protein of unknown function (DUF615); pfam04751"
                     /db_xref="CDD:461418"
     CDS             1..298
                     /gene="LOC107940633"
                     /coded_by="XM_016874068.2:564..1460"
                     /db_xref="GeneID:107940633"
ORIGIN      
        1 marlirslrq wpplqlqqqy hccsriltvs tktpvhcfsf atstssrrna rlrprgtrlp
       61 napstsdlre neisddsesd vkksrnqkkr earravrwgm dlasfstpqi klilrassle
      121 qdvfdalmlv krlgpdvreg krrqfnyigk llrevepelm evliqatkvg dqktlqalag
      181 setqiieeed eeeedddddq feysqsqefv ntanrwfdgl iskdieitne vfsvssvdfd
      241 rqelrklvrr vqtsqeqsqn vseeekakie aavrsarksl trflrtlakq ltteesfd
//
LOCUS       XP_040943164             297 aa            linear   PLN 06-AUG-2024
DEFINITION  UPF0307 protein ECA0281 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943164
VERSION     XP_040943164.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087230.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..297
                     /product="UPF0307 protein ECA0281 isoform X4"
                     /calculated_mol_wt=34189
     Region          83..256
                     /region_name="DUF615"
                     /note="Protein of unknown function (DUF615); pfam04751"
                     /db_xref="CDD:461418"
     CDS             1..297
                     /gene="LOC107940633"
                     /coded_by="XM_041087230.1:564..1457"
                     /db_xref="GeneID:107940633"
ORIGIN      
        1 marlirslrq wpplqlqqqy hccsriltvs tktpvhcfsf atstssrrna rlrprgtrlp
       61 napstsdlre neisddsesd vkksrnqkkr earravrwgm dlasfstpqi klilrassle
      121 qdvfdalmlv krlgpdvreg krrqfnyigk llrevepelm evliqatkvg dqktlqalag
      181 setqiieeed eeeedddddq feyssqefvn tanrwfdgli skdieitnev fsvssvdfdr
      241 qelrklvrrv qtsqeqsqnv seeekakiea avrsarkslt rflrtlakql tteesfd
//
LOCUS       XP_016729545             166 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 11, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016729545
VERSION     XP_016729545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874056.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="chaperone protein dnaJ 11, chloroplastic"
                     /calculated_mol_wt=18164
     Region          62..126
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(90..92,103,106..107,110..111)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..166
                     /gene="LOC107940625"
                     /coded_by="XM_016874056.2:475..975"
                     /db_xref="GeneID:107940625"
ORIGIN      
        1 masassalas ftfssphfmg hkvsieepss mparvhfrql rvsaacasta erpvshiacp
       61 sslyevlgiq mgatskeika ayrrlarvlh pdvsangrnd aaanefikvh eaystlsdpe
      121 kradydrtll frprrsfsvs iesmagqtss gfsgyskrtw etdqcw
//
LOCUS       XP_016703184             394 aa            linear   PLN 06-AUG-2024
DEFINITION  BRISC and BRCA1-A complex member 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016703184
VERSION     XP_016703184.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847695.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703184.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..394
                     /product="BRISC and BRCA1-A complex member 2 isoform X1"
                     /calculated_mol_wt=45223
     Region          6..389
                     /region_name="BRE-like"
                     /note="BRCA1-A and BRISC complex subunit BRE and related
                     proteins; cl45929"
                     /db_xref="CDD:480269"
     Site            order(14..16,21,23,31..33,43,45,56,58,60,62..63,67..75,
                     82..85,98,101..102,104,173..175,189..191,193,211..216,
                     219..220,222,227,230..234,257,260..261,263,267,270..272,
                     274..286,288,290,292,294..297,300,305,322..324,340..341,
                     351,370,373,376..377,380)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467820"
     CDS             1..394
                     /gene="LOC107918164"
                     /coded_by="XM_016847695.2:278..1462"
                     /db_xref="GeneID:107918164"
ORIGIN      
        1 msldgfppfi saqlhylinh fpdkikveqv lsggktytgg ldrftllipy cldyikwdii
       61 ynaefplapp diifgteded fhplhmtgrv gegdlkfrni lsdwnykdpt rllaliqelr
      121 drymayqkkr vgevdddrlt feisticsre giemqissga ekpeevkfav plmdmninkm
      181 vhgcpwrhpq kiclqviypv gkkyastpsa prlklmstte lralftiedv klpswldgmc
      241 maeylphlee slqkqvleav slidirrhfi ealaplfgrp leadpvfcrk atflassgsf
      301 vflvhfhist lfpkqqpalm lqssqflysl enmnidcllq hispqgipkk spllaeypws
      361 prweasqmae rifdflades lnfkrfcnes qpqh
//
LOCUS       XP_016703185             379 aa            linear   PLN 06-AUG-2024
DEFINITION  BRISC and BRCA1-A complex member 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016703185
VERSION     XP_016703185.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847696.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703185.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..379
                     /product="BRISC and BRCA1-A complex member 2 isoform X2"
                     /calculated_mol_wt=43424
     Region          6..374
                     /region_name="BRE-like"
                     /note="BRCA1-A and BRISC complex subunit BRE and related
                     proteins; cl45929"
                     /db_xref="CDD:480269"
     Site            order(14..16,21,23,31..33,43,45,56,58,60,62..63,67..75,
                     82..85,98,101..102,104,173..175,189..191,193,211..216,
                     219..220,222,227,230..234,257,260..261,263,267,270..272,
                     274..286,288,290,292,294..297,300,305,322..326,336,355,
                     358,361..362,365)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467820"
     CDS             1..379
                     /gene="LOC107918164"
                     /coded_by="XM_016847696.2:282..1421"
                     /db_xref="GeneID:107918164"
ORIGIN      
        1 msldgfppfi saqlhylinh fpdkikveqv lsggktytgg ldrftllipy cldyikwdii
       61 ynaefplapp diifgteded fhplhmtgrv gegdlkfrni lsdwnykdpt rllaliqelr
      121 drymayqkkr vgevdddrlt feisticsre giemqissga ekpeevkfav plmdmninkm
      181 vhgcpwrhpq kiclqviypv gkkyastpsa prlklmstte lralftiedv klpswldgmc
      241 maeylphlee slqkqvleav slidirrhfi ealaplfgrp leadpvfcrk atflassgsf
      301 vflvhfhist lfpkqqpalm lqssqhispq gipkksplla eypwsprwea sqmaerifdf
      361 ladeslnfkr fcnesqpqh
//
LOCUS       XP_040943165             452 aa            linear   PLN 06-AUG-2024
DEFINITION  tubulin beta chain [Gossypium hirsutum].
ACCESSION   XP_040943165
VERSION     XP_040943165.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087231.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..452
                     /product="tubulin beta chain"
                     /calculated_mol_wt=50575
     Region          1..439
                     /region_name="PLN00220"
                     /note="tubulin beta chain; Provisional"
                     /db_xref="CDD:215107"
     CDS             1..452
                     /gene="LOC121213888"
                     /coded_by="XM_041087231.1:210..1568"
                     /db_xref="GeneID:121213888"
ORIGIN      
        1 mreilhvqgg qcgnqigskf wevicgehgv dptgrynadg essdnhleri nvyynessgg
       61 ryvpravlmd lepgtmdsir sgpygqifrp dnfvfgqsga gnnwakghyt egaelidavl
      121 dvvrqeaenc dclqgfqvch slgggtgsgm gtlliskire eypdrmmmtf svfpspkvsd
      181 tvvepynatl svhqlvenad ecmvldneal ydicfrtlkl ttpsfgdlnh lisgtmsgvt
      241 cclrfpgqln sdlrklavnl ipfprlhffm vgfapltsrg sqqyisltvp eltqqmwdak
      301 nmmcaadprh gryltasamf rgkmstkevd eqminvqnkn ssyfvewipn nvkssvcdip
      361 pknlrmastf vgnstsiqem frrvseqfta mfrrkaflhw ytgegmdeme fteaesnmnd
      421 lvaeyqqyqd aavddegeye ddvdgveddy es
//
LOCUS       XP_016702883             550 aa            linear   PLN 06-AUG-2024
DEFINITION  probable alkaline/neutral invertase B [Gossypium hirsutum].
ACCESSION   XP_016702883
VERSION     XP_016702883.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702883.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..550
                     /product="probable alkaline/neutral invertase B"
                     /calculated_mol_wt=63094
     Region          4..550
                     /region_name="Glyco_hydro_100"
                     /note="Alkaline and neutral invertase; cl17340"
                     /db_xref="CDD:450179"
     CDS             1..550
                     /gene="LOC107917953"
                     /coded_by="XM_016847394.2:1..1653"
                     /db_xref="GeneID:107917953"
ORIGIN      
        1 mcplringsp ngnvktlgsa gtifeaedsd illrimerpr ainvsfeerp snellsnhfe
       61 clsphgrrsg fnsprsytsf eahamvgeaw enmkrsivyy rrqpvgtvaa mdhsveelny
      121 dqvfvrdfvp salaflmnge eevvknfllk tlhlqswekm idqfklgegv mpasfkvihn
      181 pvrnreilia dfgesaigrv apvdsgfwwi illraytrht gdsslaempe cqrgmrlilt
      241 lclseafdtf ptllcadgcc midrrmgvyg ypieiqalff malrcallll kqdqegkefi
      301 erivkrlhal sfhmrnyfwl dlkqlndiyr ykteeyshta vnkfnvmpds lpdwvfdfmp
      361 trggyfignv sparmdfrwf clgncvails slatpeqasa imdliesrwd elvgemplki
      421 cypaleshew rivtgcdpkn trwsyhnggs wpvllwllta aciktgrpqi arraielaen
      481 rlskdhwpey ydgktgryig kqarkfqtws isgylvakmm ledpshlgmi sleedkqmkp
      541 lmkrstswtc
//
LOCUS       XP_016702037             426 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016702037
VERSION     XP_016702037.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702037.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46234
     CDS             1..426
                     /gene="LOC107917172"
                     /coded_by="XM_016846548.2:97..1377"
                     /db_xref="GeneID:107917172"
ORIGIN      
        1 malltflpea aaepmkqqpk rrrkqvkkqk qpttsswdqi knlltckqme gskvhdpskn
       61 nnpapphhhq hgysklgssc ssicsfrdvv hgntrvvhra dnspesstig qetallrrka
      121 vngsssrsls gstrsnnstt tssssraiqf rklsgcyech tivdpsryps srtsicacsq
      181 cgevfpkies lelhqavrha vselgpedsg rniveiifks swlkkdnpic kierilkvhn
      241 nqrtiqrfed crdavktrai nstrknprca adgnellrfh cttlscslga rgssslcgsi
      301 pgcgvctiir qgfqnkgggt apaaefkgvv ttassgrahd sikrtdgrra mlvcrviagr
      361 vkrvadeapp ledenssgvs ssagsydsva ayagvysnle elvvfnarai lpcfvviyka
      421 lecgli
//
LOCUS       XP_040943166             426 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943166
VERSION     XP_040943166.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087232.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46234
     CDS             1..426
                     /gene="LOC107917172"
                     /coded_by="XM_041087232.1:73..1353"
                     /db_xref="GeneID:107917172"
ORIGIN      
        1 malltflpea aaepmkqqpk rrrkqvkkqk qpttsswdqi knlltckqme gskvhdpskn
       61 nnpapphhhq hgysklgssc ssicsfrdvv hgntrvvhra dnspesstig qetallrrka
      121 vngsssrsls gstrsnnstt tssssraiqf rklsgcyech tivdpsryps srtsicacsq
      181 cgevfpkies lelhqavrha vselgpedsg rniveiifks swlkkdnpic kierilkvhn
      241 nqrtiqrfed crdavktrai nstrknprca adgnellrfh cttlscslga rgssslcgsi
      301 pgcgvctiir qgfqnkgggt apaaefkgvv ttassgrahd sikrtdgrra mlvcrviagr
      361 vkrvadeapp ledenssgvs ssagsydsva ayagvysnle elvvfnarai lpcfvviyka
      421 lecgli
//
LOCUS       XP_040943167             523 aa            linear   PLN 06-AUG-2024
DEFINITION  endoglucanase 10 [Gossypium hirsutum].
ACCESSION   XP_040943167
VERSION     XP_040943167.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087233.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..523
                     /product="endoglucanase 10"
                     /calculated_mol_wt=57115
     Region          60..522
                     /region_name="PLN02345"
                     /note="endoglucanase"
                     /db_xref="CDD:177979"
     CDS             1..523
                     /gene="LOC107944708"
                     /coded_by="XM_041087233.1:98..1669"
                     /db_xref="GeneID:107944708"
ORIGIN      
        1 mgkesksrgf fgwflvlvil alvvgavvyi ikkkldhgnd nkptpvpgpp gaidhkyaya
       61 leiamqffdv qksgrlvdnk iswrgdsalt dgseakldls kgmydagdhv kfgfpmafta
      121 tvlswailey rdqmeavnql epaqqslkwi tdfllnahps pnvlyiqvgd pvtdhkcwdr
      181 pedmteerpl tqvnasvpgt eiaaetaaam asaslvfkta dstysstllt hakqlftfad
      241 nnrgsyseki pevatyynst gygdellwaa swlyhatadq syleyvtgen gkefaqwgsp
      301 twfswdnkla gaqvllsrls ffgasgnsvi enyrksaedv mcgllpqspt atssrtesgl
      361 iwvsewnslq hpvasaflaa lygdymlttq takltcgdhs fepsdlrkfa klqadyvlgs
      421 nplkmsflvg ygdkypqyvh hrgasipvna ttgctdgfqw lnstkpnpnv avgalvggpf
      481 lnetfvdsrn ntmqteptty nsavivglls slvttsaavk sfg
//
LOCUS       XP_016734023             145 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 23 [Gossypium
            hirsutum].
ACCESSION   XP_016734023
VERSION     XP_016734023.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878534.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016734023.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..145
                     /product="mediator of RNA polymerase II transcription
                     subunit 23"
                     /calculated_mol_wt=16250
     CDS             1..145
                     /gene="LOC107944706"
                     /coded_by="XM_016878534.2:30..467"
                     /db_xref="GeneID:107944706"
ORIGIN      
        1 mfwvvsytma qpacetvmnw lssggvtell peanvqpner fmvmrevspl pisllsgfsm
       61 nlylklvfqm eeslfagqvv psiamvetyt rllliaphsl fcshfshlaq rnasllskpa
      121 vtllvleivn yrllppyrcr dpqvc
//
LOCUS       XP_016701950             217 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
            [Gossypium hirsutum].
ACCESSION   XP_016701950
VERSION     XP_016701950.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701950.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..217
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG1"
                     /calculated_mol_wt=23501
     Region          12..192
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..217
                     /gene="LOC107917076"
                     /coded_by="XM_016846461.2:432..1085"
                     /db_xref="GeneID:107917076"
ORIGIN      
        1 menhrhnsrf krvcvfcgss pgknpsyqla aiqlgqqlve rdidlvyggg siglmglvsq
       61 avfdggrhvl gvipktlmpr eltgetvgev ravsgmhqrk aemarqadaf ialpggygtl
      121 eellevitwa qlgihdkpvg llnvdgyyns llsfidkavd egfiapaars iivsaqtaqd
      181 lmckleeyep khsgvaskls wemeqqlgft aksdiar
//
LOCUS       XP_016706575             108 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR50 [Gossypium hirsutum].
ACCESSION   XP_016706575
VERSION     XP_016706575.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851086.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706575.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="auxin-responsive protein SAUR50"
                     /calculated_mol_wt=12218
     Region          3..108
                     /region_name="PLN03090"
                     /note="auxin-responsive family protein; Provisional"
                     /db_xref="CDD:178639"
     CDS             1..108
                     /gene="LOC107921205"
                     /coded_by="XM_016851086.2:138..464"
                     /db_xref="GeneID:107921205"
ORIGIN      
        1 mrmaisrksn klaqtamikq ilkrcsslgk kqsygdeqgl pldvpkghfv vyvgenrsry
       61 ivpisfltrp efqsllhqae eefgfdhdmg ltipceevlf qsltsmlr
//
LOCUS       XP_016707663            1137 aa            linear   PLN 06-AUG-2024
DEFINITION  filament-like plant protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707663
VERSION     XP_016707663.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852174.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707663.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1137
                     /product="filament-like plant protein 4 isoform X1"
                     /calculated_mol_wt=125322
     Region          158..1023
                     /region_name="FPP"
                     /note="Filament-like plant protein, long coiled-coil;
                     pfam05911"
                     /db_xref="CDD:461778"
     CDS             1..1137
                     /gene="LOC107922247"
                     /coded_by="XM_016852174.2:259..3672"
                     /db_xref="GeneID:107922247"
ORIGIN      
        1 mdvtrclfss sssslfsskl maclflsryf qsqittntkl llllhsssti cfaikgfqvm
       61 drrwpwkkks sdkadkdaaa aaaeadaaaa alasaasqnd qntykkpkyv qismesyshl
      121 tglenqvkiy eeqvqtlede ikdlneklsa anseisgked lvkqhtkvae eavsgwekae
      181 aealalknhl esvtllklta edrashldga lkecmrqirn lkeeheqklq dlavsknklc
      241 ekikleleak iayldqelrk saaendaisr slqersnllv kiteeksqae tqieclkgni
      301 escereinsl kyemhvvske leirneernm smrtaeaank qhmegvkkia kleaecqrlr
      361 glvrkklpgp aalaqmklev eslgrdygdt rlkrspvrps tphtpavtdf sldnaqkfhk
      421 eneflterll ameeetkmlk ealakrnsel lasrnlcakt stklqtleaq laisnqqrsp
      481 skvsnspsvt svsedgidde kscadswats miselsqfkk eksieklnkt envkhldlmd
      541 dflemeklac ssndstanga itnagstnnk speavnadas getsckelqs gkqhdlsppa
      601 nhgpivhpes dadkllvmkl hsklsmvles mskdadahki lddikcaiqd aqdtlsdhsv
      661 ngvseevdgs egkcnrqghp engsltegkd iavppgdkvt tetlqtisqe lavaisqihd
      721 fvislgkeas avdnissday glshkiddfs vtynkvlcsn vnlddfifgl stvlakasel
      781 rfnvlgfksn eaemngpdci dkvalpenkv nqndssggry qngcahisnp tsnpedpddg
      841 nlvseyeskq asnisseefe elklekenma mdlsrctenl emtksqlhet eqllaeaksq
      901 laaaqksnsl aetqlkcmve syrslerrag eletdvnlls tkintlenel qdekrshhda
      961 fsrckeleeq lqrnekcfvc saadndlknn qerelaaaae klaecqetif llgkklkalh
     1021 pqtdkigspy nersqkgegf redepttsgm nlqdldqadi dtaasgngsq tgaespmesf
     1081 ntpcsppnte gnvlrspvss khrstmsssl sttpattpek hsrgfsrffs skgkngv
//
LOCUS       XP_016707664            1136 aa            linear   PLN 06-AUG-2024
DEFINITION  filament-like plant protein 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707664
VERSION     XP_016707664.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852175.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707664.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1136
                     /product="filament-like plant protein 4 isoform X2"
                     /calculated_mol_wt=125193
     Region          158..1022
                     /region_name="FPP"
                     /note="Filament-like plant protein, long coiled-coil;
                     pfam05911"
                     /db_xref="CDD:461778"
     CDS             1..1136
                     /gene="LOC107922247"
                     /coded_by="XM_016852175.2:311..3721"
                     /db_xref="GeneID:107922247"
ORIGIN      
        1 mdvtrclfss sssslfsskl maclflsryf qsqittntkl llllhsssti cfaikgfqvm
       61 drrwpwkkks sdkadkdaaa aaaeadaaaa alasaasqnd qntykkpkyv qismesyshl
      121 tglenqvkiy eeqvqtlede ikdlneklsa anseisgked lvkqhtkvae eavsgwekae
      181 aealalknhl esvtllklta edrashldga lkecmrqirn lkeeheqklq dlavsknklc
      241 ekikleleak iayldqelrk saaendaisr slqersnllv kiteeksqae tqieclkgni
      301 escereinsl kyemhvvske leirneernm smrtaeaank qhmegvkkia kleaecqrlr
      361 glvrkklpgp aalaqmklev eslgrdygdt rlkrspvrps tphtpavtdf sldnaqkfhk
      421 eneflterll ameeetkmlk ealakrnsel lasrnlcakt stklqtleaq laisnqqrsp
      481 skvsnspsvt svsedgidde kscadswats miselsqfkk eksieklnkt envkhldlmd
      541 dflemeklac ssndstanga itnagstnnk speavnadas getsckelqs gkqhdlsppa
      601 nhgpivhpes dadkllvmkl hsklsmvles mskdadahki lddikcaiqd aqdtlsdhsv
      661 ngvseevdgs egkcnrqghp engsltegkd iavppgdkvt tetlqtisqe lavaisqihd
      721 fvislgkeas avdnissday glshkiddfs vtynkvlcsn vnlddfifgl stvlakasel
      781 rfnvlgfksn eaemngpdci dkvalpenkv nqndssggry qngcahisnp tsnpedpddg
      841 nlvseyeskq asnisseefe elklekenma mdlsrctenl emtksqlhet eqllaeaksq
      901 laaaqksnsl aetqlkcmve syrslerrag eletdvnlls tkintlenel qdekrshhda
      961 fsrckeleeq lqrnekcfvc saadndlknn qrelaaaaek laecqetifl lgkklkalhp
     1021 qtdkigspyn ersqkgegfr edepttsgmn lqdldqadid taasgngsqt gaespmesfn
     1081 tpcsppnteg nvlrspvssk hrstmsssls ttpattpekh srgfsrffss kgkngv
//
LOCUS       XP_016707665            1091 aa            linear   PLN 06-AUG-2024
DEFINITION  filament-like plant protein 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707665
VERSION     XP_016707665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852176.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1091
                     /product="filament-like plant protein 4 isoform X3"
                     /calculated_mol_wt=120137
     Region          112..977
                     /region_name="FPP"
                     /note="Filament-like plant protein, long coiled-coil;
                     pfam05911"
                     /db_xref="CDD:461778"
     CDS             1..1091
                     /gene="LOC107922247"
                     /coded_by="XM_016852176.2:270..3545"
                     /db_xref="GeneID:107922247"
ORIGIN      
        1 mngchtaikg fqvmdrrwpw kkkssdkadk daaaaaaead aaaaalasaa sqndqntykk
       61 pkyvqismes yshltglenq vkiyeeqvqt ledeikdlne klsaanseis gkedlvkqht
      121 kvaeeavsgw ekaeaealal knhlesvtll kltaedrash ldgalkecmr qirnlkeehe
      181 qklqdlavsk nklcekikle leakiayldq elrksaaend aisrslqers nllvkiteek
      241 sqaetqiecl kgniescere inslkyemhv vskeleirne ernmsmrtae aankqhmegv
      301 kkiakleaec qrlrglvrkk lpgpaalaqm kleveslgrd ygdtrlkrsp vrpstphtpa
      361 vtdfsldnaq kfhkeneflt erllameeet kmlkealakr nsellasrnl caktstklqt
      421 leaqlaisnq qrspskvsns psvtsvsedg iddekscads watsmisels qfkkeksiek
      481 lnktenvkhl dlmddfleme klacssndst angaitnags tnnkspeavn adasgetsck
      541 elqsgkqhdl sppanhgpiv hpesdadkll vmklhsklsm vlesmskdad ahkilddikc
      601 aiqdaqdtls dhsvngvsee vdgsegkcnr qghpengslt egkdiavppg dkvttetlqt
      661 isqelavais qihdfvislg keasavdnis sdayglshki ddfsvtynkv lcsnvnlddf
      721 ifglstvlak aselrfnvlg fksneaemng pdcidkvalp enkvnqndss ggryqngcah
      781 isnptsnped pddgnlvsey eskqasniss eefeelklek enmamdlsrc tenlemtksq
      841 lheteqllae aksqlaaaqk snslaetqlk cmvesyrsle rrageletdv nllstkintl
      901 enelqdekrs hhdafsrcke leeqlqrnek cfvcsaadnd lknnqerela aaaeklaecq
      961 etifllgkkl kalhpqtdki gspynersqk gegfredept tsgmnlqdld qadidtaasg
     1021 ngsqtgaesp mesfntpcsp pntegnvlrs pvsskhrstm ssslsttpat tpekhsrgfs
     1081 rffsskgkng v
//
LOCUS       XP_016707668            1078 aa            linear   PLN 06-AUG-2024
DEFINITION  filament-like plant protein 4 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016707668
VERSION     XP_016707668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852179.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1078
                     /product="filament-like plant protein 4 isoform X4"
                     /calculated_mol_wt=118750
     Region          99..964
                     /region_name="FPP"
                     /note="Filament-like plant protein, long coiled-coil;
                     pfam05911"
                     /db_xref="CDD:461778"
     CDS             1..1078
                     /gene="LOC107922247"
                     /coded_by="XM_016852179.2:317..3553"
                     /db_xref="GeneID:107922247"
ORIGIN      
        1 mdrrwpwkkk ssdkadkdaa aaaaeadaaa aalasaasqn dqntykkpky vqismesysh
       61 ltglenqvki yeeqvqtled eikdlnekls aanseisgke dlvkqhtkva eeavsgweka
      121 eaealalknh lesvtllklt aedrashldg alkecmrqir nlkeeheqkl qdlavsknkl
      181 cekiklelea kiayldqelr ksaaendais rslqersnll vkiteeksqa etqieclkgn
      241 iescereins lkyemhvvsk eleirneern msmrtaeaan kqhmegvkki akleaecqrl
      301 rglvrkklpg paalaqmkle veslgrdygd trlkrspvrp stphtpavtd fsldnaqkfh
      361 keneflterl lameeetkml kealakrnse llasrnlcak tstklqtlea qlaisnqqrs
      421 pskvsnspsv tsvsedgidd ekscadswat smiselsqfk keksieklnk tenvkhldlm
      481 ddflemekla cssndstang aitnagstnn kspeavnada sgetsckelq sgkqhdlspp
      541 anhgpivhpe sdadkllvmk lhsklsmvle smskdadahk ilddikcaiq daqdtlsdhs
      601 vngvseevdg segkcnrqgh pengsltegk diavppgdkv ttetlqtisq elavaisqih
      661 dfvislgkea savdnissda yglshkiddf svtynkvlcs nvnlddfifg lstvlakase
      721 lrfnvlgfks neaemngpdc idkvalpenk vnqndssggr yqngcahisn ptsnpedpdd
      781 gnlvseyesk qasnisseef eelklekenm amdlsrcten lemtksqlhe teqllaeaks
      841 qlaaaqksns laetqlkcmv esyrslerra geletdvnll stkintlene lqdekrshhd
      901 afsrckelee qlqrnekcfv csaadndlkn nqerelaaaa eklaecqeti fllgkklkal
      961 hpqtdkigsp ynersqkgeg fredepttsg mnlqdldqad idtaasgngs qtgaespmes
     1021 fntpcsppnt egnvlrspvs skhrstmsss lsttpattpe khsrgfsrff sskgkngv
//
LOCUS       XP_040943169            1077 aa            linear   PLN 06-AUG-2024
DEFINITION  filament-like plant protein 4 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943169
VERSION     XP_040943169.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087235.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1077
                     /product="filament-like plant protein 4 isoform X5"
                     /calculated_mol_wt=118621
     Region          99..963
                     /region_name="FPP"
                     /note="Filament-like plant protein, long coiled-coil;
                     pfam05911"
                     /db_xref="CDD:461778"
     CDS             1..1077
                     /gene="LOC107922247"
                     /coded_by="XM_041087235.1:299..3532"
                     /db_xref="GeneID:107922247"
ORIGIN      
        1 mdrrwpwkkk ssdkadkdaa aaaaeadaaa aalasaasqn dqntykkpky vqismesysh
       61 ltglenqvki yeeqvqtled eikdlnekls aanseisgke dlvkqhtkva eeavsgweka
      121 eaealalknh lesvtllklt aedrashldg alkecmrqir nlkeeheqkl qdlavsknkl
      181 cekiklelea kiayldqelr ksaaendais rslqersnll vkiteeksqa etqieclkgn
      241 iescereins lkyemhvvsk eleirneern msmrtaeaan kqhmegvkki akleaecqrl
      301 rglvrkklpg paalaqmkle veslgrdygd trlkrspvrp stphtpavtd fsldnaqkfh
      361 keneflterl lameeetkml kealakrnse llasrnlcak tstklqtlea qlaisnqqrs
      421 pskvsnspsv tsvsedgidd ekscadswat smiselsqfk keksieklnk tenvkhldlm
      481 ddflemekla cssndstang aitnagstnn kspeavnada sgetsckelq sgkqhdlspp
      541 anhgpivhpe sdadkllvmk lhsklsmvle smskdadahk ilddikcaiq daqdtlsdhs
      601 vngvseevdg segkcnrqgh pengsltegk diavppgdkv ttetlqtisq elavaisqih
      661 dfvislgkea savdnissda yglshkiddf svtynkvlcs nvnlddfifg lstvlakase
      721 lrfnvlgfks neaemngpdc idkvalpenk vnqndssggr yqngcahisn ptsnpedpdd
      781 gnlvseyesk qasnisseef eelklekenm amdlsrcten lemtksqlhe teqllaeaks
      841 qlaaaqksns laetqlkcmv esyrslerra geletdvnll stkintlene lqdekrshhd
      901 afsrckelee qlqrnekcfv csaadndlkn nqrelaaaae klaecqetif llgkklkalh
      961 pqtdkigspy nersqkgegf redepttsgm nlqdldqadi dtaasgngsq tgaespmesf
     1021 ntpcsppnte gnvlrspvss khrstmsssl sttpattpek hsrgfsrffs skgkngv
//
LOCUS       XP_040943171             150 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-induced protein 6B [Gossypium hirsutum].
ACCESSION   XP_040943171
VERSION     XP_040943171.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087237.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="auxin-induced protein 6B"
                     /calculated_mol_wt=17089
     Region          17..100
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..150
                     /gene="LOC121213894"
                     /coded_by="XM_041087237.1:214..666"
                     /db_xref="GeneID:121213894"
ORIGIN      
        1 mspglgkcsk irhivrlrqm lrrwrnkarv sasripsdvp aghvavyvgt scrrfvvrlt
       61 ylnhpvfkkl liqaeeeygf tnqgplsipc detvfeevir fisrsdsghs gkftciedfk
      121 gnchvgirsn fdlwtesrpl lhgfvektiw
//
LOCUS       XP_016707387             945 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin response factor 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707387
VERSION     XP_016707387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..945
                     /product="auxin response factor 5 isoform X1"
                     /calculated_mol_wt=103964
     Region          149..250
                     /region_name="B3"
                     /note="B3 DNA binding domain; smart01019"
                     /db_xref="CDD:214977"
     Site            order(151,154,162,165,167,202,213,215..216,218..219)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          281..358
                     /region_name="Auxin_resp"
                     /note="Auxin response factor; pfam06507"
                     /db_xref="CDD:428981"
     Region          537..>858
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          <840..908
                     /region_name="AUX_IAA"
                     /note="AUX/IAA family; pfam02309"
                     /db_xref="CDD:460529"
     CDS             1..945
                     /gene="LOC107922066"
                     /coded_by="XM_016851898.2:955..3792"
                     /db_xref="GeneID:107922066"
ORIGIN      
        1 mgsvveekik qgglvnvgaq stlleemkll kemqdqsgtr kainselwha cagplvslpq
       61 vgslvyyfpq ghseqvavst krmatsqipn ypnlpsqlmc qvhnvtlhad rdtdeiyaqm
      121 slqpvnsekd vfpipdfglk lskhpneffc ktltasdtst hggfsvprra aeklfpsldy
      181 smqpptqelv vrdlhdntwt frhiyrgqpk rhllttgwsl fvgskrlrag dsvlfirdek
      241 sqllvgvrra nrqqttlpss vlsadsmhig vlaaaahaaa nrspftifyn pracpsefvi
      301 plpryrksvy gsqvsvgmrf gmmfeteesg krrymgtivg isdldplrwp gskwrnlqve
      361 wdepgcndkq nrvsaweiet peslfifpsl tsslkrplyp gfsaaesewg slmkrpllqf
      421 pengngnlpy smsnlcseql mkmmlkpqlv nhpgifaspl qqiadvkvpp leemknlqsk
      481 shpkpqviqs enmlienrnl shpvpdqpdp itsnmskina ngnphpanil tqagtgssne
      541 klkldskhsa eqltstsecn eeklvastvn ttmsnqlsfp tqphiplqvq nnpwsiqsql
      601 dssvlqahqm lvsqadistl nsflpfsdtd ewtsnlsscq plsgaykspg pipmvglqds
      661 savfpvetdd slttvgeeiw dqklnncrvs sqadqlasft eqdpcslnsg gvrdlsddsn
      721 nqsgiysscl nidvsngcst vidpfvssai ldefcslkda dfqnpsdclv gnfsscqdvq
      781 sqitsaslad sqafsrqdlp dssggnidfd dsgllqnnsw kqtaprvrty tkvqkagsvg
      841 rsidvtsfkn ydelisaiec mfglkglldd prgsgwklvy vdyendvllv gddpweefvg
      901 cvrcirilsp tevqqmseeg mkllnsaatv qgingsnseg snana
//
LOCUS       XP_040943172             944 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin response factor 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943172
VERSION     XP_040943172.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087238.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..944
                     /product="auxin response factor 5 isoform X2"
                     /calculated_mol_wt=103893
     Region          149..250
                     /region_name="B3"
                     /note="B3 DNA binding domain; smart01019"
                     /db_xref="CDD:214977"
     Site            order(151,154,162,165,167,202,213,215..216,218..219)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          281..358
                     /region_name="Auxin_resp"
                     /note="Auxin response factor; pfam06507"
                     /db_xref="CDD:428981"
     Region          536..>857
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          <839..907
                     /region_name="AUX_IAA"
                     /note="AUX/IAA family; pfam02309"
                     /db_xref="CDD:460529"
     CDS             1..944
                     /gene="LOC107922066"
                     /coded_by="XM_041087238.1:776..3610"
                     /db_xref="GeneID:107922066"
ORIGIN      
        1 mgsvveekik qgglvnvgaq stlleemkll kemqdqsgtr kainselwha cagplvslpq
       61 vgslvyyfpq ghseqvavst krmatsqipn ypnlpsqlmc qvhnvtlhad rdtdeiyaqm
      121 slqpvnsekd vfpipdfglk lskhpneffc ktltasdtst hggfsvprra aeklfpsldy
      181 smqpptqelv vrdlhdntwt frhiyrgqpk rhllttgwsl fvgskrlrag dsvlfirdek
      241 sqllvgvrra nrqqttlpss vlsadsmhig vlaaaahaaa nrspftifyn pracpsefvi
      301 plpryrksvy gsqvsvgmrf gmmfeteesg krrymgtivg isdldplrwp gskwrnlqve
      361 wdepgcndkq nrvsaweiet peslfifpsl tsslkrplyp gfsaesewgs lmkrpllqfp
      421 engngnlpys msnlcseqlm kmmlkpqlvn hpgifasplq qiadvkvppl eemknlqsks
      481 hpkpqviqse nmlienrnls hpvpdqpdpi tsnmskinan gnphpanilt qagtgssnek
      541 lkldskhsae qltstsecne eklvastvnt tmsnqlsfpt qphiplqvqn npwsiqsqld
      601 ssvlqahqml vsqadistln sflpfsdtde wtsnlsscqp lsgaykspgp ipmvglqdss
      661 avfpvetdds lttvgeeiwd qklnncrvss qadqlasfte qdpcslnsgg vrdlsddsnn
      721 qsgiysscln idvsngcstv idpfvssail defcslkdad fqnpsdclvg nfsscqdvqs
      781 qitsaslads qafsrqdlpd ssggnidfdd sgllqnnswk qtaprvrtyt kvqkagsvgr
      841 sidvtsfkny delisaiecm fglkgllddp rgsgwklvyv dyendvllvg ddpweefvgc
      901 vrcirilspt evqqmseegm kllnsaatvq gingsnsegs nana
//
LOCUS       XP_016707388             420 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase At1g29790 [Gossypium hirsutum].
ACCESSION   XP_016707388
VERSION     XP_016707388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..420
                     /product="probable methyltransferase At1g29790"
                     /calculated_mol_wt=46690
     Region          <262..>406
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..420
                     /gene="LOC107922067"
                     /coded_by="XM_016851899.2:219..1481"
                     /db_xref="GeneID:107922067"
ORIGIN      
        1 mgsvslktgd gtarfkratl cssavnilml fsvittnlfa lyaftfspkq hldnpfhhph
       61 rnislisqhv sliikeidss qrklaqmeke llgydtldls rpnlatelkl flqhhqlplg
      121 kdsrtgitem vasvghscek sadllsqyms ykvsgpcpdd wslaqklilk gceplprrrc
      181 faktvpkpgl tslpvslwkp vsdkivtwsg lgcknfncln skklsrdcvg cfnltngyet
      241 qkyvkarskn dfvmddvlal gsggirigfd igggsgnfaa rmaernvtvi tntlnvdaph
      301 sefiaarglf plflsldhrf pfydnvfdlv hatsgldveg kpekleflmf dldrilragg
      361 lfwldnfycs ddekkraltr lierfgykkl kwvvgektda agsgkpqvyl savlqkpvri
//
LOCUS       XP_040943173             538 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943173
VERSION     XP_040943173.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087239.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..538
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59643
     Region          292..482
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..538
                     /gene="LOC107917384"
                     /coded_by="XM_041087239.1:149..1765"
                     /db_xref="GeneID:107917384"
ORIGIN      
        1 mgasssteqp asaeqrelen iaastgalpl lqksfsnlsd pqtnaisvqt lqqcfhlcye
       61 dpvcesqqkp esfprlldhl gssivdlffl sekgginwlg flggyvkccg rmptsmslni
      121 llrifamavk klglssnlef epddadckin gsllpsdlll llwmcwamlw nvrtlksser
      181 kgnlllldin hlvlsavvac aevdssfdlw ncdivgldvq lpvgkflnwa ittapilsdc
      241 ltqyvnrrlq isvlaedeag ssesisgdms pnasqalllt rgrawaisla prstiteeil
      301 klcfsadivg tdenllyrss thgkglnrfw snvegyhgpl lvlisansed ayqdnnkark
      361 wiigaltqqg fenkdtfygs sgnlyaispi fhvfspsgke knyvyshlhp tgrvyeshpk
      421 pvgiafggtt tnervflded fakltvrhha mdktyqpgsl ipnqgflpve asisevevwg
      481 lggktakevq dsykkreelf teqrrkvdlk tfatwddspe kmmmdmmgdp nrvqredr
//
LOCUS       XP_016702985             422 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016702985
VERSION     XP_016702985.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847496.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702985.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X1"
                     /calculated_mol_wt=45948
     CDS             1..422
                     /gene="LOC107918010"
                     /coded_by="XM_016847496.2:362..1630"
                     /db_xref="GeneID:107918010"
ORIGIN      
        1 mrglhkskrv twapdvnlcq irlflseesp lqvglgaqdh lqaktssish lngatvddfl
       61 ppgfegsrst dqmqinltdi lvvkwrcplr fvldlnwqvv ageeskeadv qnqrelrvle
      121 avyprpsaip tnpsvsadma ncqyddkqtp qipitpiede daaigtqsnv lapfgaptsl
      181 qpqlldilph lncsmpsiss vptnekptaa aftatnqsne ngnmidpdll vqilsnpkli
      241 eklvtehgva sgaqslpiss inlvpsfdmp psaghigrte ndgafygksn gvgigasnkh
      301 gsvpgvcpis hslamelpqk kdvnyyknli qqhggesqvg gqkfnnrynq qlrpnqevin
      361 nprsrdskpr imkpciyfnn srgcrnganc ayqhdtssqn rgnsipdapt akrmkmdrei
      421 gs
//
LOCUS       XP_016702984             422 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016702984
VERSION     XP_016702984.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847495.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702984.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X1"
                     /calculated_mol_wt=45948
     CDS             1..422
                     /gene="LOC107918010"
                     /coded_by="XM_016847495.2:567..1835"
                     /db_xref="GeneID:107918010"
ORIGIN      
        1 mrglhkskrv twapdvnlcq irlflseesp lqvglgaqdh lqaktssish lngatvddfl
       61 ppgfegsrst dqmqinltdi lvvkwrcplr fvldlnwqvv ageeskeadv qnqrelrvle
      121 avyprpsaip tnpsvsadma ncqyddkqtp qipitpiede daaigtqsnv lapfgaptsl
      181 qpqlldilph lncsmpsiss vptnekptaa aftatnqsne ngnmidpdll vqilsnpkli
      241 eklvtehgva sgaqslpiss inlvpsfdmp psaghigrte ndgafygksn gvgigasnkh
      301 gsvpgvcpis hslamelpqk kdvnyyknli qqhggesqvg gqkfnnrynq qlrpnqevin
      361 nprsrdskpr imkpciyfnn srgcrnganc ayqhdtssqn rgnsipdapt akrmkmdrei
      421 gs
//
LOCUS       XP_040943175             422 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943175
VERSION     XP_040943175.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087241.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X1"
                     /calculated_mol_wt=45948
     CDS             1..422
                     /gene="LOC107918010"
                     /coded_by="XM_041087241.1:404..1672"
                     /db_xref="GeneID:107918010"
ORIGIN      
        1 mrglhkskrv twapdvnlcq irlflseesp lqvglgaqdh lqaktssish lngatvddfl
       61 ppgfegsrst dqmqinltdi lvvkwrcplr fvldlnwqvv ageeskeadv qnqrelrvle
      121 avyprpsaip tnpsvsadma ncqyddkqtp qipitpiede daaigtqsnv lapfgaptsl
      181 qpqlldilph lncsmpsiss vptnekptaa aftatnqsne ngnmidpdll vqilsnpkli
      241 eklvtehgva sgaqslpiss inlvpsfdmp psaghigrte ndgafygksn gvgigasnkh
      301 gsvpgvcpis hslamelpqk kdvnyyknli qqhggesqvg gqkfnnrynq qlrpnqevin
      361 nprsrdskpr imkpciyfnn srgcrnganc ayqhdtssqn rgnsipdapt akrmkmdrei
      421 gs
//
LOCUS       XP_040943176             400 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943176
VERSION     XP_040943176.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087242.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X2"
                     /calculated_mol_wt=43737
     CDS             1..400
                     /gene="LOC107918010"
                     /coded_by="XM_041087242.1:362..1564"
                     /db_xref="GeneID:107918010"
ORIGIN      
        1 mrglhkskrv twapdvnlcq irlflseesp lqvglgaqdh lqaktssish lngatvddfl
       61 ppgfegsrst dqmqinltdi lvvkwrcplr fvldlnwqvv ageeskeadv qnqrelrvle
      121 avyprpsaip tnpsvsadma ncqyddkqtp qipitpiede daaigtqsnv lapfgaptsl
      181 qpqlldilph lncsmpsiss vptnekptaa aftatnqsne ngnmidpdll vqilsnpkli
      241 eklvtehgva sghigrtend gafygksngv gigasnkhgs vpgvcpishs lamelpqkkd
      301 vnyyknliqq hggesqvggq kfnnrynqql rpnqevinnp rsrdskprim kpciyfnnsr
      361 gcrngancay qhdtssqnrg nsipdaptak rmkmdreigs
//
LOCUS       XP_016702987             400 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016702987
VERSION     XP_016702987.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016702987.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X2"
                     /calculated_mol_wt=43737
     CDS             1..400
                     /gene="LOC107918010"
                     /coded_by="XM_016847498.2:567..1769"
                     /db_xref="GeneID:107918010"
ORIGIN      
        1 mrglhkskrv twapdvnlcq irlflseesp lqvglgaqdh lqaktssish lngatvddfl
       61 ppgfegsrst dqmqinltdi lvvkwrcplr fvldlnwqvv ageeskeadv qnqrelrvle
      121 avyprpsaip tnpsvsadma ncqyddkqtp qipitpiede daaigtqsnv lapfgaptsl
      181 qpqlldilph lncsmpsiss vptnekptaa aftatnqsne ngnmidpdll vqilsnpkli
      241 eklvtehgva sghigrtend gafygksngv gigasnkhgs vpgvcpishs lamelpqkkd
      301 vnyyknliqq hggesqvggq kfnnrynqql rpnqevinnp rsrdskprim kpciyfnnsr
      361 gcrngancay qhdtssqnrg nsipdaptak rmkmdreigs
//
LOCUS       XP_040943177             400 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943177
VERSION     XP_040943177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087243.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..400
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X2"
                     /calculated_mol_wt=43737
     CDS             1..400
                     /gene="LOC107918010"
                     /coded_by="XM_041087243.1:404..1606"
                     /db_xref="GeneID:107918010"
ORIGIN      
        1 mrglhkskrv twapdvnlcq irlflseesp lqvglgaqdh lqaktssish lngatvddfl
       61 ppgfegsrst dqmqinltdi lvvkwrcplr fvldlnwqvv ageeskeadv qnqrelrvle
      121 avyprpsaip tnpsvsadma ncqyddkqtp qipitpiede daaigtqsnv lapfgaptsl
      181 qpqlldilph lncsmpsiss vptnekptaa aftatnqsne ngnmidpdll vqilsnpkli
      241 eklvtehgva sghigrtend gafygksngv gigasnkhgs vpgvcpishs lamelpqkkd
      301 vnyyknliqq hggesqvggq kfnnrynqql rpnqevinnp rsrdskprim kpciyfnnsr
      361 gcrngancay qhdtssqnrg nsipdaptak rmkmdreigs
//
LOCUS       XP_040943178             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 32 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943178
VERSION     XP_040943178.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087244.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..838
                     /product="protein IQ-DOMAIN 32 isoform X1"
                     /calculated_mol_wt=92689
     Region          <761..826
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..838
                     /gene="LOC107890409"
                     /coded_by="XM_041087244.1:281..2797"
                     /db_xref="GeneID:107890409"
ORIGIN      
        1 mgkstscfkl itcgsdsaek ddaidapenk rssdkkgwsf rkrserhrvl snsviqvttt
       61 tglkesqdsv gfefqqqdvs vasektstvq yteekpqlmt pkeyieeksq llalkeytee
      121 kshsltpiel aeeksqllap ikcteeksql tpepeeskvp epitattnea eddfsldesv
      181 vviiqtairg flaqkelgkl knlvklqaav rghlvrrhav gtlrcvqaiv kmqllvrarq
      241 sqegsyvekl dgkhqgvnqr lqgnsatkkn ltynsmekll snrfahqlmd stpktktihf
      301 kcdsskpnsa wswlerwmsv sssekaskae lpieqpeqkk tedcdsprtp avpsenisas
      361 nepkpqvret mvssesednl itydaanfkf eacqpssssv tddseqpqid saiksdlket
      421 spemnsqgqt mqisahsqie vhclsnkpet gseqpkhsme rfasehlete akkfvfgskr
      481 tsnpafiaaq tkfeelssta nssrsinssy qdvsvesnld tvpsgadmis rskepsisen
      541 pvlnnwrvqh ggsecgtefs itstldspdr seagtleyen atkvseqenc tskstkdldv
      601 knndtvaipv pdsslpvahq peklddskgg lanlivadfp qveqellksa snlqreqdpm
      661 knqayrsspe vsprshmtvp esqgtpssev svkakkektd kisqkcksls aakgspstpa
      721 astmeelpkd qkngkrrnsf sstrpenide eprdsnssnp lprfmqatea arakvntnns
      781 prsspdvqdr diyikkrhsl pgangrqgsp riqrslsqaq qgakrngtnp tqerrwqr
//
LOCUS       XP_016670314             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 32 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016670314
VERSION     XP_016670314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016814825.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..838
                     /product="protein IQ-DOMAIN 32 isoform X1"
                     /calculated_mol_wt=92689
     Region          <761..826
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..838
                     /gene="LOC107890409"
                     /coded_by="XM_016814825.2:281..2797"
                     /db_xref="GeneID:107890409"
ORIGIN      
        1 mgkstscfkl itcgsdsaek ddaidapenk rssdkkgwsf rkrserhrvl snsviqvttt
       61 tglkesqdsv gfefqqqdvs vasektstvq yteekpqlmt pkeyieeksq llalkeytee
      121 kshsltpiel aeeksqllap ikcteeksql tpepeeskvp epitattnea eddfsldesv
      181 vviiqtairg flaqkelgkl knlvklqaav rghlvrrhav gtlrcvqaiv kmqllvrarq
      241 sqegsyvekl dgkhqgvnqr lqgnsatkkn ltynsmekll snrfahqlmd stpktktihf
      301 kcdsskpnsa wswlerwmsv sssekaskae lpieqpeqkk tedcdsprtp avpsenisas
      361 nepkpqvret mvssesednl itydaanfkf eacqpssssv tddseqpqid saiksdlket
      421 spemnsqgqt mqisahsqie vhclsnkpet gseqpkhsme rfasehlete akkfvfgskr
      481 tsnpafiaaq tkfeelssta nssrsinssy qdvsvesnld tvpsgadmis rskepsisen
      541 pvlnnwrvqh ggsecgtefs itstldspdr seagtleyen atkvseqenc tskstkdldv
      601 knndtvaipv pdsslpvahq peklddskgg lanlivadfp qveqellksa snlqreqdpm
      661 knqayrsspe vsprshmtvp esqgtpssev svkakkektd kisqkcksls aakgspstpa
      721 astmeelpkd qkngkrrnsf sstrpenide eprdsnssnp lprfmqatea arakvntnns
      781 prsspdvqdr diyikkrhsl pgangrqgsp riqrslsqaq qgakrngtnp tqerrwqr
//
LOCUS       XP_016670315             837 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 32 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016670315
VERSION     XP_016670315.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016814826.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..837
                     /product="protein IQ-DOMAIN 32 isoform X2"
                     /calculated_mol_wt=92561
     Region          <760..825
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..837
                     /gene="LOC107890409"
                     /coded_by="XM_016814826.2:281..2794"
                     /db_xref="GeneID:107890409"
ORIGIN      
        1 mgkstscfkl itcgsdsaek ddaidapenk rssdkkgwsf rkrserhrvl snsviqvttt
       61 tglkesqdsv gfefqqqdvs vasektstvq yteekpqlmt pkeyieeksq llalkeytee
      121 kshsltpiel aeeksqllap ikcteeksql tpepeeskvp epitattnea eddfsldesv
      181 vviiqtairg flaqkelgkl knlvklqaav rghlvrrhav gtlrcvqaiv kmqllvrarq
      241 sqegsyvekl dgkhqgvnqr lgnsatkknl tynsmeklls nrfahqlmds tpktktihfk
      301 cdsskpnsaw swlerwmsvs ssekaskael pieqpeqkkt edcdsprtpa vpsenisasn
      361 epkpqvretm vssesednli tydaanfkfe acqpssssvt ddseqpqids aiksdlkets
      421 pemnsqgqtm qisahsqiev hclsnkpetg seqpkhsmer fasehletea kkfvfgskrt
      481 snpafiaaqt kfeelsstan ssrsinssyq dvsvesnldt vpsgadmisr skepsisenp
      541 vlnnwrvqhg gsecgtefsi tstldspdrs eagtleyena tkvseqenct skstkdldvk
      601 nndtvaipvp dsslpvahqp eklddskggl anlivadfpq veqellksas nlqreqdpmk
      661 nqayrsspev sprshmtvpe sqgtpssevs vkakkektdk isqkckslsa akgspstpaa
      721 stmeelpkdq kngkrrnsfs strpenidee prdsnssnpl prfmqateaa rakvntnnsp
      781 rsspdvqdrd iyikkrhslp gangrqgspr iqrslsqaqq gakrngtnpt qerrwqr
//
LOCUS       XP_040943179             837 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 32 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943179
VERSION     XP_040943179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087245.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..837
                     /product="protein IQ-DOMAIN 32 isoform X2"
                     /calculated_mol_wt=92561
     Region          <760..825
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..837
                     /gene="LOC107890409"
                     /coded_by="XM_041087245.1:281..2794"
                     /db_xref="GeneID:107890409"
ORIGIN      
        1 mgkstscfkl itcgsdsaek ddaidapenk rssdkkgwsf rkrserhrvl snsviqvttt
       61 tglkesqdsv gfefqqqdvs vasektstvq yteekpqlmt pkeyieeksq llalkeytee
      121 kshsltpiel aeeksqllap ikcteeksql tpepeeskvp epitattnea eddfsldesv
      181 vviiqtairg flaqkelgkl knlvklqaav rghlvrrhav gtlrcvqaiv kmqllvrarq
      241 sqegsyvekl dgkhqgvnqr lgnsatkknl tynsmeklls nrfahqlmds tpktktihfk
      301 cdsskpnsaw swlerwmsvs ssekaskael pieqpeqkkt edcdsprtpa vpsenisasn
      361 epkpqvretm vssesednli tydaanfkfe acqpssssvt ddseqpqids aiksdlkets
      421 pemnsqgqtm qisahsqiev hclsnkpetg seqpkhsmer fasehletea kkfvfgskrt
      481 snpafiaaqt kfeelsstan ssrsinssyq dvsvesnldt vpsgadmisr skepsisenp
      541 vlnnwrvqhg gsecgtefsi tstldspdrs eagtleyena tkvseqenct skstkdldvk
      601 nndtvaipvp dsslpvahqp eklddskggl anlivadfpq veqellksas nlqreqdpmk
      661 nqayrsspev sprshmtvpe sqgtpssevs vkakkektdk isqkckslsa akgspstpaa
      721 stmeelpkdq kngkrrnsfs strpenidee prdsnssnpl prfmqateaa rakvntnnsp
      781 rsspdvqdrd iyikkrhslp gangrqgspr iqrslsqaqq gakrngtnpt qerrwqr
//
LOCUS       XP_016670316             740 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 32 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016670316
VERSION     XP_016670316.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016814827.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..740
                     /product="protein IQ-DOMAIN 32 isoform X3"
                     /calculated_mol_wt=81784
     Region          <663..728
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..740
                     /gene="LOC107890409"
                     /coded_by="XM_016814827.2:298..2520"
                     /db_xref="GeneID:107890409"
ORIGIN      
        1 mtpkeyieek sqllalkeyt eekshsltpi elaeeksqll apikcteeks qltpepeesk
       61 vpepitattn eaeddfslde svvviiqtai rgflaqkelg klknlvklqa avrghlvrrh
      121 avgtlrcvqa ivkmqllvra rqsqegsyve kldgkhqgvn qrlqgnsatk knltynsmek
      181 llsnrfahql mdstpktkti hfkcdsskpn sawswlerwm svsssekask aelpieqpeq
      241 kktedcdspr tpavpsenis asnepkpqvr etmvssesed nlitydaanf kfeacqpsss
      301 svtddseqpq idsaiksdlk etspemnsqg qtmqisahsq ievhclsnkp etgseqpkhs
      361 merfasehle teakkfvfgs krtsnpafia aqtkfeelss tanssrsins syqdvsvesn
      421 ldtvpsgadm isrskepsis enpvlnnwrv qhggsecgte fsitstldsp drseagtley
      481 enatkvseqe nctskstkdl dvknndtvai pvpdsslpva hqpeklddsk gglanlivad
      541 fpqveqellk sasnlqreqd pmknqayrss pevsprshmt vpesqgtpss evsvkakkek
      601 tdkisqkcks lsaakgspst paastmeelp kdqkngkrrn sfsstrpeni deeprdsnss
      661 nplprfmqat eaarakvntn nsprsspdvq drdiyikkrh slpgangrqg spriqrslsq
      721 aqqgakrngt nptqerrwqr
//
LOCUS       XP_016670317             308 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SHI RELATED SEQUENCE 5 [Gossypium hirsutum].
ACCESSION   XP_016670317
VERSION     XP_016670317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016814828.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="protein SHI RELATED SEQUENCE 5"
                     /calculated_mol_wt=34156
     Region          94..241
                     /region_name="DUF702"
                     /note="Domain of unknown function (DUF702); pfam05142"
                     /db_xref="CDD:461560"
     CDS             1..308
                     /gene="LOC107890410"
                     /coded_by="XM_016814828.2:691..1617"
                     /db_xref="GeneID:107890410"
ORIGIN      
        1 maglfylggr eadtgnkqee dkeeslylyr neeiynkgfe iwpqyyyhqq qqqqqqenvn
       61 tisfgagpsr rargfnlsde pssrsvgftv mkhggmncqd cgnqakkdca hmrcrtccks
      121 rgfqcqthvk stwvpaakrr erqqqlaalq hhqqhedqfr genpkrlren qgspslactr
      181 lspttsglel gqfppevssp avfrsvkvsa mddedeefay qtavniaghv fkgilydqgp
      241 eshytggges sqqlnlitaa vttaetartt ttaaissnpa tsmldpslyp aplnafiagt
      301 qffppprs
//
LOCUS       XP_016706759             398 aa            linear   PLN 06-AUG-2024
DEFINITION  S-type anion channel SLAH4 [Gossypium hirsutum].
ACCESSION   XP_016706759
VERSION     XP_016706759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851270.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..398
                     /product="S-type anion channel SLAH4"
                     /calculated_mol_wt=44414
     Region          46..359
                     /region_name="TDT_SLAC1_like"
                     /note="Tellurite-resistance/Dicarboxylate Transporter
                     (TDT) family includes SLAC1 (Slow Anion Channel-Associated
                     1); cd09323"
                     /db_xref="CDD:187763"
     Site            316
                     /site_type="other"
                     /note="gating phenylalanine in ion channel"
                     /db_xref="CDD:187763"
     CDS             1..398
                     /gene="LOC107921416"
                     /coded_by="XM_016851270.2:67..1263"
                     /db_xref="GeneID:107921416"
ORIGIN      
        1 maavvtshte lqfvvdtaea aagglmssti vakgikeslt stltkfhagy frvslslggq
       61 allwktlrgp tddthtlrrt lhlfhptaft vlwslsffal vllsilyllr clfyfkmvke
      121 effhhvgvny lfapsiswll llqsspfftp qthysytviw wvlavlpiav ldvkiygqwf
      181 tkgkkflsav anptsqlsvi gnlvgaqaaa emgwkesaig lfslgmvhyl vlfvtlyqrl
      241 sgtdqlpsml rpvfflffaa psiaslawqs iagsfdtask mlfflslflf mslvcrptlf
      301 kvsmkkfnva wwaysfplsv lalasmeyae evkgdiphll mlllltfsvf vsiclvvftl
      361 lnskillflp hcfdpissli sramcstpqq nqqrpqtv
//
LOCUS       XP_016708000             877 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708000
VERSION     XP_016708000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852511.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..877
                     /product="uncharacterized protein"
                     /calculated_mol_wt=95861
     Region          10..>69
                     /region_name="MCRS_N"
                     /note="N-terminal region of micro-spherule protein;
                     pfam13325"
                     /db_xref="CDD:463845"
     Region          754..858
                     /region_name="FHA_MCRS1"
                     /note="forkhead associated (FHA) domain found in
                     microspherule protein 1 (MCRS1) and similar proteins;
                     cd22687"
                     /db_xref="CDD:438739"
     Site            order(779..780,801..802,804,821,823..824)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438739"
     CDS             1..877
                     /gene="LOC107922463"
                     /coded_by="XM_016852511.2:528..3161"
                     /db_xref="GeneID:107922463"
ORIGIN      
        1 mgalapvlst wipeddlllk naieagasle slakgavqfs rkftvrelqd rwhsllydpv
       61 vseeassrii efersassls lkfgrtgnsk dnkslggkrk sesvrscyya lrkricnepf
      121 ntmdlsflia pndgnyvgle deplpgncml gnpisdqfgv qetnmnimsc sfpqmladdg
      181 agvgdecttd gfqttnhnpd dssfpvepvn lhkeiphmlr enqfllesgs gieelhgske
      241 lpvsslfsan dlmvkpsstf dqinndpeni csefegnqvf nspvmdcgls iwgtdeglsa
      301 saiptdghee kdmqgdvyal pgdidtksdh aaehdvttds klepdmpcae mghqtadteg
      361 ylveitntlm ndepffmdvd akdvidksyf dglssflass pnncdqdqmp dvteamaset
      421 qdnlanassc lgeldevags saadgpvscd sealmlssvl tsncqfpelt ngiicctlnt
      481 edpevpcned vfskqlcpsv vsstqhvfke agnplsasfk dfsggqktdg gpflvqrdqr
      541 dpgqsigasq tkesqmvpem gqlhpvnncr vkcedsscva pktdgflanv spqtnsknit
      601 egtlqptllk ersesiisgk hlghtsadsl rekpalcsdn hnslysfaik qevdalekik
      661 dhqatsaevg pmdiispepv idhpppdlee lmiesdddvp yfsdieamil dmdldpddqd
      721 lwdqevaryq hedykkaiir leqvshsymq raiashgafa ilygrhskhy ikkpeillgr
      781 ttedfvvdid lgregcankv srrqaifnle ddgsfhlknl gkcsvsinnk evgpgqslsl
      841 dsgclieirg mpfifetnqt cvkqylnskl rksggpc
//
LOCUS       XP_016707426             798 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized TPR repeat-containing protein At1g05150 [Gossypium
            hirsutum].
ACCESSION   XP_016707426
VERSION     XP_016707426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851937.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..798
                     /product="uncharacterized TPR repeat-containing protein
                     At1g05150"
                     /calculated_mol_wt=89412
     Region          9..>56
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     Region          214..>415
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          264..294
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          306..>471
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          307..335
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(342,345..346,349..350,352,376,379..380,383..384,
                     386..387,410,413..414,417..418,421)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          342..369
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          374..404
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          409..437
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          443..471
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          729..>761
                     /region_name="ZZ"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin, CBP/p300 and many other proteins. The ZZ motif
                     coordinates one or two zinc ions and most likely
                     participates in ligand binding or molecular scaffolding.
                     Many proteins containing ZZ motifs have...; cl00295"
                     /db_xref="CDD:412288"
     Site            order(731,734,753,756)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239069"
     Site            order(732,742,744,749,751)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239069"
     CDS             1..798
                     /gene="LOC107922099"
                     /coded_by="XM_016851937.2:444..2840"
                     /db_xref="GeneID:107922099"
ORIGIN      
        1 matrgsrsek vkrifqqfdn nrdgglnrde maalvvavnp rvkfsdeqln aildevfrty
       61 gefidgekgl tydgllrtyd dgagdvdrdf dalglelypd enkgasivse assssiader
      121 vtesqrkqrt tawagsphhe ivfddtwklv deleillkrl qakqaktgkf ksdnfdaysd
      181 agwsrelgps aelsekkvyw eetgpdygif vkelgalrsr adgarsreea fdgqmaigrv
      241 lyehqlfkea lisfkrscel qpmdvrphfr agnclyvlgk ykeakeefll aleaaeaggn
      301 qwgyllpqiy vnlgialege gmvlsaceyy reaailcpth fralkllgsa lfgvgeyraa
      361 akaleeaifm kpdyadahcd lgsalhalge deraievfqk aidlkpghvd alynlgglym
      421 dlgrfqrase mytrvlavwp nhwraqlnka vsllgagete eakkalkeal kmtnrvelhd
      481 aiyhlkqlqk kkvksngggn gegafvivep skfktvgekt tlrqdlgsai qirafqritr
      541 lsrcnvdllk kemneidvpv tysggggpqk sirkpnlegi lrrllsflkp etfqgavkai
      601 nerilsvlde tgsgrvdlgm fyavlapicn gppnkrkria fdallrrpvn egssqirkvd
      661 avqyikwlra iyvpshgise ilevhgetds smvsfseflt mfddpdwgfg imstllklen
      721 gdrnrhgrrv cavcrypvig srfrevkshf slcnqcyseg kvppsfkqde ykfkeygsea
      781 eamkdkcmyf tlqshksp
//
LOCUS       XP_016706261             545 aa            linear   PLN 06-AUG-2024
DEFINITION  aldehyde oxidase GLOX1 [Gossypium hirsutum].
ACCESSION   XP_016706261
VERSION     XP_016706261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850772.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="aldehyde oxidase GLOX1"
                     /calculated_mol_wt=59872
     Region          44..284
                     /region_name="Glyoxal_oxid_N"
                     /note="Glyoxal oxidase N-terminus; pfam07250"
                     /db_xref="CDD:399910"
     Region          258..>418
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          451..544
                     /region_name="GO-like_E_set"
                     /note="Galactose oxidase-like, Early set domain;
                     pfam09118"
                     /db_xref="CDD:462683"
     CDS             1..545
                     /gene="LOC107920939"
                     /coded_by="XM_016850772.2:131..1768"
                     /db_xref="GeneID:107920939"
ORIGIN      
        1 maemstlctf lfslllfasq plilptaadg rwqllqksig issmhmqllk ndrvvmydrt
       61 dfgpstlpla sgkchndptn tavqvdctah sveydvlsnk fraltvqsnv wcssggvmpd
      121 gklvqtggfs dgelrvrvfs pcescdwhet pnglaakrwy atnhvlpdgr qivvggreqf
      181 nyefvpknia admfklhfls etnergvenn lypfvflnvd gnlfifannr ailldyvnnk
      241 vvktypkipg geprsypstg savllplknl iaatiqaevl vcggapkgsf vqalqgkfvk
      301 aldtcarisi tdpkpkwvle tmplarvmgd mvllpngkvl vingarsgsa gwdlgrdpvl
      361 npvlympdne iesrfkilnp tniprmyhst avllrdgrvl vggsnphayy nftgvlypte
      421 lsleafypgy ldakfnnlrp tivapksmsg iryskklkiq vvitgevtln llsvtmvspa
      481 fnthsfsmnq rllvlgndkv masgkstyki evmtpgsgnl apagfyllfv vhqdipsqgi
      541 wvhlk
//
LOCUS       XP_016707528             336 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BASIC PENTACYSTEINE6 [Gossypium hirsutum].
ACCESSION   XP_016707528
VERSION     XP_016707528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852039.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="protein BASIC PENTACYSTEINE6"
                     /calculated_mol_wt=37032
     Region          1..336
                     /region_name="GAGA_bind"
                     /note="GAGA binding protein-like family; pfam06217"
                     /db_xref="CDD:461854"
     CDS             1..336
                     /gene="LOC107922158"
                     /coded_by="XM_016852039.2:408..1418"
                     /db_xref="GeneID:107922158"
ORIGIN      
        1 mddgghreng rlkadqyrta qgqwlmhqps mkqimaimae rdaaiqernl alsekkaaia
       61 erdmaflqrd aaiaernnai aerdnaianl qyrenslasg nisscppgfh isrgvkhmqh
      121 pqqhvhhlph isevpynsre mhasdvlpvt pgtseaaksr qgkrakeakv iasnkkatkp
      181 pkkvkqened sdklmsgksh ewkggqdvgg agddlnkqlv ttksdwkgkd lglnqvvfdd
      241 stmappvcsc tgvlrqcykw gnggwqsscc ttslsmyplp avpnkrhari ggrkmsgsaf
      301 nklltrlaae gydlsnpvdl khhwakhgtn ryitik
//
LOCUS       XP_016707529             336 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BASIC PENTACYSTEINE6 [Gossypium hirsutum].
ACCESSION   XP_016707529
VERSION     XP_016707529.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852040.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="protein BASIC PENTACYSTEINE6"
                     /calculated_mol_wt=37032
     Region          1..336
                     /region_name="GAGA_bind"
                     /note="GAGA binding protein-like family; pfam06217"
                     /db_xref="CDD:461854"
     CDS             1..336
                     /gene="LOC107922158"
                     /coded_by="XM_016852040.2:429..1439"
                     /db_xref="GeneID:107922158"
ORIGIN      
        1 mddgghreng rlkadqyrta qgqwlmhqps mkqimaimae rdaaiqernl alsekkaaia
       61 erdmaflqrd aaiaernnai aerdnaianl qyrenslasg nisscppgfh isrgvkhmqh
      121 pqqhvhhlph isevpynsre mhasdvlpvt pgtseaaksr qgkrakeakv iasnkkatkp
      181 pkkvkqened sdklmsgksh ewkggqdvgg agddlnkqlv ttksdwkgkd lglnqvvfdd
      241 stmappvcsc tgvlrqcykw gnggwqsscc ttslsmyplp avpnkrhari ggrkmsgsaf
      301 nklltrlaae gydlsnpvdl khhwakhgtn ryitik
//
LOCUS       XP_016707530             336 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BASIC PENTACYSTEINE6 [Gossypium hirsutum].
ACCESSION   XP_016707530
VERSION     XP_016707530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852041.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="protein BASIC PENTACYSTEINE6"
                     /calculated_mol_wt=37032
     Region          1..336
                     /region_name="GAGA_bind"
                     /note="GAGA binding protein-like family; pfam06217"
                     /db_xref="CDD:461854"
     CDS             1..336
                     /gene="LOC107922158"
                     /coded_by="XM_016852041.2:397..1407"
                     /db_xref="GeneID:107922158"
ORIGIN      
        1 mddgghreng rlkadqyrta qgqwlmhqps mkqimaimae rdaaiqernl alsekkaaia
       61 erdmaflqrd aaiaernnai aerdnaianl qyrenslasg nisscppgfh isrgvkhmqh
      121 pqqhvhhlph isevpynsre mhasdvlpvt pgtseaaksr qgkrakeakv iasnkkatkp
      181 pkkvkqened sdklmsgksh ewkggqdvgg agddlnkqlv ttksdwkgkd lglnqvvfdd
      241 stmappvcsc tgvlrqcykw gnggwqsscc ttslsmyplp avpnkrhari ggrkmsgsaf
      301 nklltrlaae gydlsnpvdl khhwakhgtn ryitik
//
LOCUS       XP_016707531             336 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BASIC PENTACYSTEINE6 [Gossypium hirsutum].
ACCESSION   XP_016707531
VERSION     XP_016707531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="protein BASIC PENTACYSTEINE6"
                     /calculated_mol_wt=37032
     Region          1..336
                     /region_name="GAGA_bind"
                     /note="GAGA binding protein-like family; pfam06217"
                     /db_xref="CDD:461854"
     CDS             1..336
                     /gene="LOC107922158"
                     /coded_by="XM_016852042.2:397..1407"
                     /db_xref="GeneID:107922158"
ORIGIN      
        1 mddgghreng rlkadqyrta qgqwlmhqps mkqimaimae rdaaiqernl alsekkaaia
       61 erdmaflqrd aaiaernnai aerdnaianl qyrenslasg nisscppgfh isrgvkhmqh
      121 pqqhvhhlph isevpynsre mhasdvlpvt pgtseaaksr qgkrakeakv iasnkkatkp
      181 pkkvkqened sdklmsgksh ewkggqdvgg agddlnkqlv ttksdwkgkd lglnqvvfdd
      241 stmappvcsc tgvlrqcykw gnggwqsscc ttslsmyplp avpnkrhari ggrkmsgsaf
      301 nklltrlaae gydlsnpvdl khhwakhgtn ryitik
//
LOCUS       XP_016707532             116 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707532
VERSION     XP_016707532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..116
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12483
     CDS             1..116
                     /gene="LOC107922160"
                     /coded_by="XM_016852043.2:123..473"
                     /db_xref="GeneID:107922160"
ORIGIN      
        1 megssgkgya waisagfnaa faavaakfll hpviryglvv ffnvimwgcy vnslkalssl
       61 qatvtnfatn fltsglagff lfeellsfkw fagamiivig vlilskssve krekkd
//
LOCUS       XP_016707495             818 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit a3 [Gossypium hirsutum].
ACCESSION   XP_016707495
VERSION     XP_016707495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852006.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..818
                     /product="V-type proton ATPase subunit a3"
                     /calculated_mol_wt=92773
     Region          35..810
                     /region_name="V_ATPase_I"
                     /note="V-type ATPase 116kDa subunit family; pfam01496"
                     /db_xref="CDD:460232"
     CDS             1..818
                     /gene="LOC107922140"
                     /coded_by="XM_016852006.2:234..2690"
                     /db_xref="GeneID:107922140"
ORIGIN      
        1 mgggthrptm dllrsepmql vqliipiesa hrsisylgdl gffqfkdlns ekspfqrtya
       61 tqikrcgema rklrffkeqm vkaglspstr saisddvdld nlevklgele aelmemnanh
      121 eklqhsynel ieyklvvqka geffhsaqsm aaakqrevea qqrgegsids pllleqemvt
      181 dpskqvklgf vsglvpreks laferilfra trgnvflkqs vlegsvtdpa sgekaeknvf
      241 vvfysgerar nkivkiceaf ganrypfted lskqfqiite vsgrleelkt tidvglvhqt
      301 nllqtiayhf eqwshlvkke ksiyhtlsml sidvtkkclv aegwcpvfat nkiqnvlqra
      361 tvdsnsqigt ifhilqtkes pptyfhtnkf tsafqeivda ygiakyqean pgvftiitfp
      421 flfavmfgdw ghgiclflat syfiikekkf ssqklgdite mifggryvim mmalfsiytg
      481 liyneffsvp felfgpsayg crdpacrdas taglvkvrat ypfgvdpkwh gtrselpfln
      541 slkmkmsill gvaqmnlgii lsyfnakfsg nelniryqfl pqmiflnslf gylsllivvk
      601 wcigsqadly hvmiymflsp tddlgenqlf fgqkflqivl llaalvavpw mlfpkpfllk
      661 kqheerhrgq syallensld esdemevrhg sssheefefs evfvhqliht iefvlgavsn
      721 tasylrlwal slahselssv fydkvlllaw gfnnifilii gifvficatv gvllvmetls
      781 aflhalrlhw vefqskfyeg dgykfqpfsf asldaede
//
LOCUS       XP_016707496             818 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit a3 [Gossypium hirsutum].
ACCESSION   XP_016707496
VERSION     XP_016707496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852007.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..818
                     /product="V-type proton ATPase subunit a3"
                     /calculated_mol_wt=92773
     Region          35..810
                     /region_name="V_ATPase_I"
                     /note="V-type ATPase 116kDa subunit family; pfam01496"
                     /db_xref="CDD:460232"
     CDS             1..818
                     /gene="LOC107922140"
                     /coded_by="XM_016852007.2:146..2602"
                     /db_xref="GeneID:107922140"
ORIGIN      
        1 mgggthrptm dllrsepmql vqliipiesa hrsisylgdl gffqfkdlns ekspfqrtya
       61 tqikrcgema rklrffkeqm vkaglspstr saisddvdld nlevklgele aelmemnanh
      121 eklqhsynel ieyklvvqka geffhsaqsm aaakqrevea qqrgegsids pllleqemvt
      181 dpskqvklgf vsglvpreks laferilfra trgnvflkqs vlegsvtdpa sgekaeknvf
      241 vvfysgerar nkivkiceaf ganrypfted lskqfqiite vsgrleelkt tidvglvhqt
      301 nllqtiayhf eqwshlvkke ksiyhtlsml sidvtkkclv aegwcpvfat nkiqnvlqra
      361 tvdsnsqigt ifhilqtkes pptyfhtnkf tsafqeivda ygiakyqean pgvftiitfp
      421 flfavmfgdw ghgiclflat syfiikekkf ssqklgdite mifggryvim mmalfsiytg
      481 liyneffsvp felfgpsayg crdpacrdas taglvkvrat ypfgvdpkwh gtrselpfln
      541 slkmkmsill gvaqmnlgii lsyfnakfsg nelniryqfl pqmiflnslf gylsllivvk
      601 wcigsqadly hvmiymflsp tddlgenqlf fgqkflqivl llaalvavpw mlfpkpfllk
      661 kqheerhrgq syallensld esdemevrhg sssheefefs evfvhqliht iefvlgavsn
      721 tasylrlwal slahselssv fydkvlllaw gfnnifilii gifvficatv gvllvmetls
      781 aflhalrlhw vefqskfyeg dgykfqpfsf asldaede
//
LOCUS       XP_040943181             261 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor IIF subunit beta [Gossypium
            hirsutum].
ACCESSION   XP_040943181
VERSION     XP_040943181.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087247.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="transcription initiation factor IIF subunit
                     beta"
                     /calculated_mol_wt=29832
     Region          2..255
                     /region_name="TFIIF_beta"
                     /note="Transcription initiation factor IIF, beta subunit;
                     cl02122"
                     /db_xref="CDD:445677"
     Site            order(8..9,15,17,20..27,30,33,36,45..53,63,91,92..100,104,
                     106..107,113)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:259828"
     CDS             1..261
                     /gene="LOC121213901"
                     /coded_by="XM_041087247.1:587..1372"
                     /db_xref="GeneID:121213901"
ORIGIN      
        1 mdedhsnsgf letgkadrsv wlmkcpvvva kswksqtass sdsqpvakvv lsldprkpdd
       61 pssmqftmem agseignipk syalnmfkdf vpmsvfsett qgrvamegkv ehkfdmkphe
      121 qnleeygrlc rertnksmik nrqiqvidnd rgvhmrpmpg mvglissntk ekkkttpvkq
      181 pemkrtrrdr geledimfkl ferqpnwalk qlvqetdqpa qflkeilnel cvynkrgsnq
      241 gtyelkpeyk ksvddtaaey l
//
LOCUS       XP_016742031             385 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WALLS ARE THIN 1 [Gossypium hirsutum].
ACCESSION   XP_016742031
VERSION     XP_016742031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886542.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..385
                     /product="protein WALLS ARE THIN 1"
                     /calculated_mol_wt=41916
     Region          26..350
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..385
                     /gene="LOC107951477"
                     /coded_by="XM_016886542.2:87..1244"
                     /db_xref="GeneID:107951477"
ORIGIN      
        1 madtggsasn trmwcsvper lqlhmamlal qfgyagfhvv sraaldmgis klvfpvyrni
       61 ialllllpfa yflekkerpa ltlnfllqff llalvgitan qgfyllgldn tsptfasaiq
      121 nsvpaitflm aailriekvr ldrkdgiskv igtilcvaga svitlykgpt iyspvpplnr
      181 ptptfvslgd angkswtlgc lylighclsw sgwlvlqapv lkkyparlsv tsytcffgli
      241 qfliialvfe rdpqawmfhs ggelftilya gvvasgiafa vqiwcidrgg pvfvavyqpv
      301 qtlvvaimas ialgeefylg giigavliiv glylvlwgks eerkfaakek iaiestaehs
      361 nnsrtsghvk pslnqpllhh stenv
//
LOCUS       XP_016742030             215 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-induced degradation protein 8 homolog [Gossypium hirsutum].
ACCESSION   XP_016742030
VERSION     XP_016742030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886541.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="glucose-induced degradation protein 8 homolog"
                     /calculated_mol_wt=24854
     Region          53..193
                     /region_name="CTLH"
                     /note="CTLH/CRA C-terminal to LisH motif domain;
                     pfam10607"
                     /db_xref="CDD:402305"
     CDS             1..215
                     /gene="LOC107951476"
                     /coded_by="XM_016886541.2:289..936"
                     /db_xref="GeneID:107951476"
ORIGIN      
        1 mdvdprlyeq iavndndihn iimsylvhnc fketvesfia ctgmkqpsdy ledmekrkri
       61 yqfalegnal kaielteqla tnlleknkdl hfdllslhfv elvcsrkcte alefaqmklt
      121 pfgkeqkyve kledfmalla yeepekspmf hllsleyrqh vaeslnrail ahgnhptyta
      181 merliqqttv vrqclnqeha kdgpppfslk dflks
//
LOCUS       XP_016742028             119 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin H1 [Gossypium hirsutum].
ACCESSION   XP_016742028
VERSION     XP_016742028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886539.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="thioredoxin H1"
                     /calculated_mol_wt=13142
     Region          25..109
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(39,42)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..119
                     /gene="LOC107951474"
                     /coded_by="XM_016886539.2:244..603"
                     /db_xref="GeneID:107951474"
ORIGIN      
        1 maeegqviac htvdswnqql emgnqskklv vvdftaswcg pcrfispilv dlakklpnvi
       61 flkvdvdeln tvaqewaiea mptfvflkeg tiidkvvgar keelqqkiaf hssnpvqta
//
LOCUS       XP_040943183             329 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerase subunit alpha-like [Gossypium
            hirsutum].
ACCESSION   XP_040943183
VERSION     XP_040943183.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087249.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="DNA-directed RNA polymerase subunit alpha-like"
                     /calculated_mol_wt=37735
     Region          11..329
                     /region_name="rpoA"
                     /note="RNA polymerase alpha subunit; CHL00013"
                     /db_xref="CDD:214333"
     CDS             1..329
                     /gene="LOC121213906"
                     /coded_by="XM_041087249.1:489..1478"
                     /db_xref="GeneID:121213906"
ORIGIN      
        1 mvrekvkvst strtrqwkcv esrtdskrly ygrfilsplm kgqadtigia mrrallgele
       61 gtcitrakse kipheystiv giqesvheil mnlkeivlrg nlygtrnafi cakgpgyvta
      121 qdiilpssve ivdntqhvas ltepidlcig lqiernrgyd iktpknfhdg sypidavfmp
      181 vrnanhsihc ygndnekqei lfleiwtngs ltpkealhea srnlidlfip flhaeeenfh
      241 lennqhdvtl pffpfhdrlv kltkkkkeia lksifidqse lppriynclk ksnihtlldl
      301 lnnsredlmk iehfriedvk qilcilekk
//
LOCUS       XP_040943184             138 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S11, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943184
VERSION     XP_040943184.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087250.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="30S ribosomal protein S11, chloroplastic"
                     /calculated_mol_wt=14784
     Region          15..130
                     /region_name="rps11"
                     /note="ribosomal protein S11; CHL00041"
                     /db_xref="CDD:176982"
     CDS             1..138
                     /gene="LOC121213909"
                     /coded_by="XM_041087250.1:1..417"
                     /db_xref="GeneID:121213909"
ORIGIN      
        1 makpipkvgs rrngrssark sarripkgvi hvqasfnnti vtvtdvwgrv iswssastcg
       61 fkgtrrgtpf aaqtaagnai ravvdqgmqr aevmikgpgl grdaalrair rsgillsfvr
      121 dvtpmphngc rppkkrrv
//
LOCUS       XP_040943185             122 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L14, chloroplastic-like [Gossypium hirsutum].
ACCESSION   XP_040943185
VERSION     XP_040943185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087251.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..122
                     /product="50S ribosomal protein L14, chloroplastic-like"
                     /calculated_mol_wt=13513
     Region          1..122
                     /region_name="rpl14"
                     /note="ribosomal protein L14; CHL00057"
                     /db_xref="CDD:176997"
     CDS             1..122
                     /gene="LOC121213910"
                     /coded_by="XM_041087251.1:1..369"
                     /db_xref="GeneID:121213910"
ORIGIN      
        1 miqpqthlnv adnsgarelm cirvigasnr ryahigdviv avikeavpnt plersevika
       61 eivrtrkelk rdngmiiryd dnvaviidqe gnpkgtrifg aiarelrqln ftkivslape
      121 vl
//
LOCUS       XP_040943186             291 aa            linear   PLN 06-AUG-2024
DEFINITION  ribulose bisphosphate carboxylase large chain-like [Gossypium
            hirsutum].
ACCESSION   XP_040943186
VERSION     XP_040943186.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087252.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..291
                     /product="ribulose bisphosphate carboxylase large
                     chain-like"
                     /calculated_mol_wt=32253
     Region          8..>291
                     /region_name="RuBisCO_large"
                     /note="Ribulose bisphosphate carboxylase large chain;
                     cl08232"
                     /db_xref="CDD:471793"
     Site            order(67..70,87,113..114,121,124..126,129..130,182..183,
                     211,214..216,218,221..222,251,259..260,275,280..283,
                     285..286,289)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:173969"
     Site            208
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:173969"
     Site            210..211
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173969"
     CDS             1..291
                     /gene="LOC121213913"
                     /coded_by="XM_041087252.1:187..1062"
                     /db_xref="GeneID:121213913"
ORIGIN      
        1 mscreglmsp qtetkasvgf kagvkeyklt yytpqyevkd tdilvafrvt pqpgvppeea
       61 gaavaaesst gtwttvwtdg ltnldrykgr cyhiepvpge edqyicyvay pldlfeegsv
      121 tnmftsivgn vfgfkalral cledlripta yiktfqglph giqverdkln kygrpllgct
      181 ikpklglsak nygravyecl rggldftkdd envnsqpfmr wrgrflfcae aiyksqaetg
      241 eikghylnai agtceeiikr avcarelgvp ivmhdyltgg ftantslahy c
//
LOCUS       XP_016722117             161 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-conjugating enzyme E2 18 [Gossypium hirsutum].
ACCESSION   XP_016722117
VERSION     XP_016722117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..161
                     /product="probable ubiquitin-conjugating enzyme E2 18"
                     /calculated_mol_wt=18277
     Region          18..117
                     /region_name="UBCc_UBE2W"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 W and related
                     enzymes; cd23808"
                     /db_xref="CDD:467428"
     CDS             1..161
                     /gene="LOC107934253"
                     /coded_by="XM_016866628.2:215..700"
                     /db_xref="GeneID:107934253"
ORIGIN      
        1 mtsssahsrk alskiacnrl qkelvewqvn pptgfkhkvt dnlqrwiiev ngapgtlyan
       61 etyqlqvdfp ehypmeapqv ifippaplhp hiysnghicl dilydswspa mtvssicisi
      121 lsmlssstak qrpadndryv kncrngrspk etrwwfhddk v
//
LOCUS       XP_016722119             156 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 44 [Gossypium hirsutum].
ACCESSION   XP_016722119
VERSION     XP_016722119.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722119.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="bZIP transcription factor 44"
                     /calculated_mol_wt=17954
     Region          33..83
                     /region_name="bZIP_plant_GBF1"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; cd14702"
                     /db_xref="CDD:269850"
     Region          33..83
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269850"
     Site            order(36..37,39..41,43..48,50..52)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     Site            order(51,54..55,58..59,61..62,65..66,68..69,72..73,75..76,
                     79..80,82..83)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269850"
     CDS             1..156
                     /gene="LOC107934255"
                     /coded_by="XM_016866630.2:502..972"
                     /db_xref="GeneID:107934255"
ORIGIN      
        1 masssgnsns sgstllqisg seedlhqlme erkrkrmesn resarrsrmr kqkylddlma
       61 qltllrkdnn qiltsinfit hhyfnieaen svlraqfmel sqrldslnhi lnylndptln
      121 ngiwvyetep fetsadsftn ftlnqpivas adifqy
//
LOCUS       XP_040943187             250 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943187
VERSION     XP_040943187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087253.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..250
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28865
     CDS             1..250
                     /gene="LOC121213915"
                     /coded_by="XM_041087253.1:194..946"
                     /db_xref="GeneID:121213915"
ORIGIN      
        1 mdsfeidnvk aekedalwry nmerklrlgl rymgfllvlf liswswsppl iphiievard
       61 lsqryvntvn dpffifilmn iiilvvyils tqkqstssgi ydeyvsshrs iipaeatvld
      121 kqivvvenav dvaetkrpls pikqqpwttk tkpaitstdk vkhkeyrrtr svvsesgkrr
      181 prrvyrrset avtgrelvvc saesareaih emsneefqlk vdsfiaerrk almqeniahy
      241 tkcmsivvkn
//
LOCUS       XP_016707316             273 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma carbonic anhydrase 1, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016707316
VERSION     XP_016707316.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851827.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..273
                     /product="gamma carbonic anhydrase 1, mitochondrial"
                     /calculated_mol_wt=29587
     Region          1..269
                     /region_name="PLN02296"
                     /note="carbonate dehydratase"
                     /db_xref="CDD:215167"
     CDS             1..273
                     /gene="LOC107922007"
                     /coded_by="XM_016851827.2:253..1074"
                     /db_xref="GeneID:107922007"
ORIGIN      
        1 mgslgkaiyt vgfwiretgq aldrlgcrlq gnyffqeqls rhrtlmnvfd ksplvdkdaf
       61 vapsasvigd vqvgrgssiw ygcvlrgdvn sisvgsgtni qdnslvhvak snlsgkvlpt
      121 nignnvtvgh savlhgctve deafvgmgat lldgvvvekh amvaagalvr qntripagev
      181 wggnpakflr klteeeiafi sqsatnytnl aqvhaaenak pfdeiefekv lrkkfakrde
      241 eydsmlgivr etppelilpd nvlpdkeqks sek
//
LOCUS       XP_016708293             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708293
VERSION     XP_016708293.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852804.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708293.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16089
     CDS             1..142
                     /gene="LOC107922671"
                     /coded_by="XM_016852804.2:213..641"
                     /db_xref="GeneID:107922671"
ORIGIN      
        1 mgsllsgwds ptsdpssail krnrsltkee ieafwrskrk teeehlnaiy gspdscnqqy
       61 greymrsssm pipnrnqgfi dmdtekslen ivkqsgwwtr stwaflnepp vldrptnnyq
      121 pqfhvaslat skfnknsgis an
//
LOCUS       XP_016706342             743 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706342
VERSION     XP_016706342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..743
                     /product="U-box domain-containing protein 5 isoform X1"
                     /calculated_mol_wt=82605
     Region          256..308
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(257,260,262..265,284,288,297)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(477,481,485,515,519,523,556,560,564)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          <482..>604
                     /region_name="KAP"
                     /note="Kinesin-associated protein (KAP); pfam05804"
                     /db_xref="CDD:253396"
     Region          531..565
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..743
                     /gene="LOC107921004"
                     /coded_by="XM_016850853.2:365..2596"
                     /db_xref="GeneID:107921004"
ORIGIN      
        1 melgatqsvd lpyhstikih rlmclelkkl vdsispmfaa lesarpgctl gmralcslqs
       61 amdkanlliq lcsessklyl aitgkglllk cdkirntlei cmiqvremvp svlaakiagi
      121 idelrsarfq leaseheaga aiiallehdk sasasrkqse iealrlsslr lsitspfall
      181 iekrsikkll gsvqdtnpnk rkvltyllyl lkkhgrliwq lqperteees lfslmkedgd
      241 envetsgydf flpitpdqii cpiskrllyd pviiasgqtf ervwiekwfn egnqmcpvtn
      301 tklmqfsltp nlamkalisk wllrhginvp qhvkpvpsll slrqpsscsi asfgisvlgf
      361 rleigsvtld svstdssldf sdrksndeik smlpqvaads hhrihhhqls tdgirvgcls
      421 eldkhswisq ckavqnvkgl ledndkaqhl tfsnshvvpv ikflkdandl cdvkmqkdga
      481 evllailsgr rielppched viyllaslld settreclai leilswqqyy ksrivacgil
      541 psilklldtt vtefnmvalk ilwnlsngsn vgyhitylgy ipklvsfled pnvagycvgi
      601 mnnirdieea rieaveaglc tsiatiless kkeeqevgve lllflcyent gyckmimten
      661 viqalsnisv ngsskgsena ltllelmdwm nasqcsrsgs rwsqgnsnvs sstsnksrlk
      721 issykalgcl rkklsrflln vlh
//
LOCUS       XP_016706343             642 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706343
VERSION     XP_016706343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850854.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..642
                     /product="U-box domain-containing protein 5 isoform X2"
                     /calculated_mol_wt=71552
     Region          155..207
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(156,159,161..164,183,187,196)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(376,380,384,414,418,422,455,459,463)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          <381..>503
                     /region_name="KAP"
                     /note="Kinesin-associated protein (KAP); pfam05804"
                     /db_xref="CDD:253396"
     Region          430..464
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..642
                     /gene="LOC107921004"
                     /coded_by="XM_016850854.2:196..2124"
                     /db_xref="GeneID:107921004"
ORIGIN      
        1 miqvremvps vlaakiagii delrsarfql easeheagaa iiallehdks asasrkqsei
       61 ealrlsslrl sitspfalli ekrsikkllg svqdtnpnkr kvltyllyll kkhgrliwql
      121 qperteeesl fslmkedgde nvetsgydff lpitpdqiic piskrllydp viiasgqtfe
      181 rvwiekwfne gnqmcpvtnt klmqfsltpn lamkaliskw llrhginvpq hvkpvpslls
      241 lrqpsscsia sfgisvlgfr leigsvtlds vstdssldfs drksndeiks mlpqvaadsh
      301 hrihhhqlst dgirvgclse ldkhswisqc kavqnvkgll edndkaqhlt fsnshvvpvi
      361 kflkdandlc dvkmqkdgae vllailsgrr ielppchedv iyllasllds ettreclail
      421 eilswqqyyk srivacgilp silklldttv tefnmvalki lwnlsngsnv gyhitylgyi
      481 pklvsfledp nvagycvgim nnirdieear ieaveaglct siatilessk keeqevgvel
      541 llflcyentg yckmimtenv iqalsnisvn gsskgsenal tllelmdwmn asqcsrsgsr
      601 wsqgnsnvss stsnksrlki ssykalgclr kklsrfllnv lh
//
LOCUS       XP_040943190             100 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943190
VERSION     XP_040943190.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087256.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10016
     CDS             1..100
                     /gene="LOC121213916"
                     /coded_by="XM_041087256.1:238..540"
                     /db_xref="GeneID:121213916"
ORIGIN      
        1 mtkialvivl ismivlvsih svvgdtaats ptastesnaa kaeapghegh dnsneswtdw
       61 akdkisgigg mfasspssep asepaptpas ssaetpevkv
//
LOCUS       XP_040943191             281 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc-finger homeodomain protein 5 [Gossypium hirsutum].
ACCESSION   XP_040943191
VERSION     XP_040943191.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087257.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..281
                     /product="zinc-finger homeodomain protein 5"
                     /calculated_mol_wt=31226
     Region          75..129
                     /region_name="ZF-HD_dimer"
                     /note="ZF-HD protein dimerization region; pfam04770"
                     /db_xref="CDD:398439"
     Region          216..272
                     /region_name="homeo_ZF_HD"
                     /note="homeobox domain, ZF-HD class; TIGR01565"
                     /db_xref="CDD:130628"
     CDS             1..281
                     /gene="LOC121213917"
                     /coded_by="XM_041087257.1:592..1437"
                     /db_xref="GeneID:121213917"
ORIGIN      
        1 mevrgeehdi ktpvrdgnhn gdavltctqt ldqvhrpqrq qslghvgrsp npdriaggsv
       61 apisvssntk plagvvryre clknhaasig gnvydgcgef mpsgeegtle alkcaacdch
      121 rnfhrkevdg etqqfggrrs lmlnplqlpp plpsptmlhh rhhhhqkyts ppsamvtpmn
      181 vafggggtes ssedlnmyqs npegmaaaap pyvlskkrfr tkftqeqkdk mlelaeklgw
      241 rinkqdedev ekfcaeygvk rrvfkvwmhn nknvkkppqd q
//
LOCUS       XP_040943192             126 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943192
VERSION     XP_040943192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087258.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..126
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14517
     CDS             1..126
                     /gene="LOC107922585"
                     /coded_by="XM_041087258.1:1773..2153"
                     /db_xref="GeneID:107922585"
ORIGIN      
        1 mfgvsifyif glvdtnhldt crllwrlqaw slqlflhcfn rncesegggk kmkakrelgd
       61 svdgerdlkw qrvvdspssp leeslvpynd dedderraln higsredghr veseeedded
      121 eddpyp
//
LOCUS       XP_016707769             902 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At2g16250 [Gossypium hirsutum].
ACCESSION   XP_016707769
VERSION     XP_016707769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..902
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At2g16250"
                     /calculated_mol_wt=99456
     Region          35..68
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <97..808
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          298..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..902
                     /gene="LOC107922304"
                     /coded_by="XM_016852280.2:702..3410"
                     /db_xref="GeneID:107922304"
ORIGIN      
        1 meaqrnalsi fllavilfli qcvvaqkarl sspierrall dlraslglrg kdwpiksdpc
       61 sswlgiecrn gsvskisvsg lkrtrlgrls pkfnvdsmvn larlvsfnas gfplpgsipd
      121 sfgnrlanle vldlrscnis gsipgtlgnl srltslylhd nnlaglipat lgllrnlkfl
      181 dlsvnsltgs ipssfgsfgn merlelasny lsesippslg tlrglqvfnv sdnnlsgsip
      241 iqfgnlsrlv kldlsrnsly sslpeelkml rslkmmimed nelegrlpvd lfsslvelqv
      301 vdlsrnkldg alnatiwsmp klqsldvssn nftgpfpglr snisattaam fnlsnnffyg
      361 tlnfslgmfr fidlsgnyfe gkvvvnntkr yaiidrnclq alkqrtledc rlfytdrgls
      421 fdnfgapdtm qpppaessse srkrlifila gvvgglgfiv llvlilvlvl rhnkgignqr
      481 rnadvgpvpe gdspqlpkdp tiagagdpft yeqlllatdn fsetnlikqg hsgdlfrgil
      541 eagipvvikr vslssfkkes ymmeldlfrk lshprfvlll ghclehetek llvykhmpng
      601 dlansfyrat nsdddslqsl dwitrlkvat gaaeglfhlh hecnpslvhr dvqassilld
      661 dkfevrlgsl sevraqegdt hqnvlkrllr kpqtsepgps asgsssttca ydvycfgkvl
      721 lelitgklgi gkaedastke wleqslpcis iyekelvtki mdpslivded lleevwamai
      781 varsclnpkp skrpsmkhil kalenplkvv reesfssarl rttssrqswg saffgswrqs
      841 ssesatipgh qnregfsgfr qagrlgshgs dgiehsssrk rlsnevfpep memqdmemld
      901 en
//
LOCUS       XP_040943193             902 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At2g16250 [Gossypium hirsutum].
ACCESSION   XP_040943193
VERSION     XP_040943193.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087259.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..902
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At2g16250"
                     /calculated_mol_wt=99456
     Region          35..68
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <97..808
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          298..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..902
                     /gene="LOC107922304"
                     /coded_by="XM_041087259.1:698..3406"
                     /db_xref="GeneID:107922304"
ORIGIN      
        1 meaqrnalsi fllavilfli qcvvaqkarl sspierrall dlraslglrg kdwpiksdpc
       61 sswlgiecrn gsvskisvsg lkrtrlgrls pkfnvdsmvn larlvsfnas gfplpgsipd
      121 sfgnrlanle vldlrscnis gsipgtlgnl srltslylhd nnlaglipat lgllrnlkfl
      181 dlsvnsltgs ipssfgsfgn merlelasny lsesippslg tlrglqvfnv sdnnlsgsip
      241 iqfgnlsrlv kldlsrnsly sslpeelkml rslkmmimed nelegrlpvd lfsslvelqv
      301 vdlsrnkldg alnatiwsmp klqsldvssn nftgpfpglr snisattaam fnlsnnffyg
      361 tlnfslgmfr fidlsgnyfe gkvvvnntkr yaiidrnclq alkqrtledc rlfytdrgls
      421 fdnfgapdtm qpppaessse srkrlifila gvvgglgfiv llvlilvlvl rhnkgignqr
      481 rnadvgpvpe gdspqlpkdp tiagagdpft yeqlllatdn fsetnlikqg hsgdlfrgil
      541 eagipvvikr vslssfkkes ymmeldlfrk lshprfvlll ghclehetek llvykhmpng
      601 dlansfyrat nsdddslqsl dwitrlkvat gaaeglfhlh hecnpslvhr dvqassilld
      661 dkfevrlgsl sevraqegdt hqnvlkrllr kpqtsepgps asgsssttca ydvycfgkvl
      721 lelitgklgi gkaedastke wleqslpcis iyekelvtki mdpslivded lleevwamai
      781 varsclnpkp skrpsmkhil kalenplkvv reesfssarl rttssrqswg saffgswrqs
      841 ssesatipgh qnregfsgfr qagrlgshgs dgiehsssrk rlsnevfpep memqdmemld
      901 en
//
LOCUS       XP_016707770             146 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: 50S ribosomal protein L27 [Gossypium
            hirsutum].
ACCESSION   XP_016707770
VERSION     XP_016707770.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852281.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707770.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="LOW QUALITY PROTEIN: 50S ribosomal protein L27"
                     /calculated_mol_wt=15824
     Region          42..123
                     /region_name="rpmA"
                     /note="50S ribosomal protein L27; Validated; PRK05435"
                     /db_xref="CDD:235464"
     CDS             1..146
                     /gene="LOC107922305"
                     /coded_by="XM_016852281.2:599..1039"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107922305"
ORIGIN      
        1 mfnitttfck risvkelvts apvygtitdg ssglslmlrr wasxktagst kngrdskpkn
       61 lgvkkfgger vipgniivrq rgtrfhpgny vgigkdhtly alkegcvkfe mhklsgrkwv
      121 hvepkeghvl hplyatadsg elktat
//
LOCUS       XP_016706480             264 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706480
VERSION     XP_016706480.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850991.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706480.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..264
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29261
     CDS             1..264
                     /gene="LOC107921124"
                     /coded_by="XM_016850991.2:16..810"
                     /db_xref="GeneID:107921124"
ORIGIN      
        1 mvyyfihynr tvktirllas lsampppmlr lisstsvstv aglppiltkp pisnqslsin
       61 pseenrqkvl rlisrrdaaf lslislfpsl lhtphasafs igisgpkdwl keqkrksskf
      121 llvpidasrq slhsvylwlm dkestisnnd leevqkllks aardcvvqer nsfvafqant
      181 gvevctfrli vknassllen knpvkleaea mlddlissft slntlanesd iqvassrqrv
      241 adalkdtits ldkfeqgikd clev
//
LOCUS       XP_016707855             638 aa            linear   PLN 06-AUG-2024
DEFINITION  S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
            [Gossypium hirsutum].
ACCESSION   XP_016707855
VERSION     XP_016707855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..638
                     /product="S-adenosyl-L-methionine-dependent tRNA
                     4-demethylwyosine synthase"
                     /calculated_mol_wt=71430
     Region          53..>203
                     /region_name="CysJ"
                     /note="Flavoprotein (flavin reductase) subunit CysJ of
                     sulfite and N-hydroxylaminopurine reductases [Nucleotide
                     transport and metabolism, Inorganic ion transport and
                     metabolism]; COG0369"
                     /db_xref="CDD:440138"
     Region          276..569
                     /region_name="rSAM_TYW1"
                     /note="wyosine biosynthesis protein TYW1; TIGR03972"
                     /db_xref="CDD:274890"
     CDS             1..638
                     /gene="LOC107922369"
                     /coded_by="XM_016852366.2:195..2111"
                     /db_xref="GeneID:107922369"
ORIGIN      
        1 mtpsslstrl tlfallsatt fyflyksrrr clkplkhlpl npnprpgklf fltqtgtska
       61 laqrlldlls sknnipfdlv dphtyepedl pkesliiiia stwedgnppq nskffvnwla
      121 distdfragn lllsdckfav fgvgsrlygd tfnavardlg krlrglgate mvpvgegdvd
      181 ggelesvfeg wsekvvtvlk gglvmeneng ivyesdvesl esdddddgeg ggedivdled
      241 iagkgpsrkk svnvaetngk ldgkremvtp viranlekqg ykiigshsgv kicrwtksql
      301 rgrggcykhs fygieshrcm eatpslacan kcvfcwrhht npvgkswqwk mddpleivnt
      361 aidlhtkmik qtkgvpgvtq erlmeglspq hcalslvgep imypeinalv delhrrrist
      421 flvtnaqfpe kikmlkpvtq lyvsvdaatk dslkaidrpl fgdfwerfid slkalkekhq
      481 rtvyrltlvk gwntedvday sklfvlgkpd fveikgvtyc gssatskltm envpwhsdvr
      541 afsealalks ageyevaceh ahsccvllak tekfkvngqw htwidyekfh dlvalgrpfd
      601 sedymaltps wavygaeegg fdpdqsrykk erhhkskr
//
LOCUS       XP_040943195             940 aa            linear   PLN 06-AUG-2024
DEFINITION  respiratory burst oxidase homolog protein D [Gossypium hirsutum].
ACCESSION   XP_040943195
VERSION     XP_040943195.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087261.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..940
                     /product="respiratory burst oxidase homolog protein D"
                     /calculated_mol_wt=106946
     Region          145..246
                     /region_name="NADPH_Ox"
                     /note="Respiratory burst NADPH oxidase; pfam08414"
                     /db_xref="CDD:462469"
     Region          245..307
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     Region          448..>771
                     /region_name="COG4097"
                     /note="Predicted ferric reductase [Inorganic ion transport
                     and metabolism]"
                     /db_xref="CDD:443273"
     Region          634..940
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(662,676..679,692..694,698..701,760)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(676,678..679)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Region          750..922
                     /region_name="NAD_binding_6"
                     /note="Ferric reductase NAD binding domain; pfam08030"
                     /db_xref="CDD:429792"
     Site            755..765
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(755,759..762,764)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(760..761,812..814,910..911)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(810..811,814)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..940
                     /gene="LOC107921843"
                     /coded_by="XM_041087261.1:45..2867"
                     /db_xref="GeneID:107921843"
ORIGIN      
        1 mrnhewrgay sennsdtesi aserttfsep lplnaapfsn krdskksatf nlppeittmp
       61 dsaaeddede gyveitldir dnsvavysvq ggnedpelal lalrtmenkt mslrsslfsn
      121 tsarikqvsq elkrvvsrrs snrkidrtks vaahalkglk fitsktgacg ngwsfvekrf
      181 ndltssangl lhrsqfaeci gmnqskefad elfqalarrh nvngdsihki qlkrfwdqic
      241 desfdsrlqt ffdmvdkdad griteeevke iislsasank latiqkqaee yaalimeeld
      301 pdnvgyimvy nletlllqap tqsvrvgdsr vlsqmlsqkl kptqernpfk rlyqkmkyfi
      361 mdnwqrvwvm mlwlgivsgl faykfvqyrn ktvygvmgyc vciakggaet lkfnmalill
      421 pvcrntitwl rnktklgvvv pfddnlnfhk viavgitvgv ilhggahltc dfprllhate
      481 eeyepmepff geeqpenyww fvrgvegvtg iimvvlmava ftlatpwfrr nklnlpkflk
      541 kltgfnafwy shhlfvivyv llivhgiyly ltkkwyqktv sffffqfpfv hcisiissil
      601 nalqtwmyla vpitlyacer lirafrssik avkilkvavy pgnvlslhms kpqgfkyksg
      661 qymfvncsav spfewhpfsi tsspgddyls vhirtlgdwt rhlktvfsqv cqppaagksg
      721 llraegtnts fpkilidgpy gapaqdykky dvvllvglgi gatpmisivk diinnmkmee
      781 dsipegsame ngnysnknnk gfktrkayfy wvtreqgsfe wfkgimneva emdekkviel
      841 hnyctsvyee gdarsalitm lqslhhakng vdvvsgtrvk shfakpnwrq vyknialrhp
      901 narigvfycg apaltkelrh laldfshktt tkfefhkenf
//
LOCUS       XP_040943196             664 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943196
VERSION     XP_040943196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087262.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=74549
     Region          35..>287
                     /region_name="PLN02649"
                     /note="glucose-6-phosphate isomerase"
                     /db_xref="CDD:215351"
     Region          295..337
                     /region_name="Retrotran_gag_3"
                     /note="gag-polypeptide of LTR copia-type; pfam14244"
                     /db_xref="CDD:464114"
     CDS             1..664
                     /gene="LOC107922074"
                     /coded_by="XM_041087262.1:166..2160"
                     /db_xref="GeneID:107922074"
ORIGIN      
        1 mpfrpshsll dcellnlasa fcqlqlpfff iplvemastt licdtqpwkd lkahtedikk
       61 thlrdlmndk ercesmmvef dgmfldysrq catletidkl yklaeaaslk qqinrmysge
      121 hinstenrsv lhvalraprd avinsdgknv vpdvwnvldk ikdfsekvrn gswvgatgkp
      181 lkdviaigig gsflgplfvh aalqtdpeav efakgrqlrf lanvdpidva rniaglnpet
      241 tlvvvvsktf ttaetmlnar tlrewissal gpsavakhmv avstnltgit qgeinsslii
      301 tnhrlngknf lqwsqsvlmv irgrgklgyi ngeiprptma dptyatweln nsivmawlin
      361 smeghisrty lffktakdmw davkenysdl gnasqvfeik lklkdirqgt levthyynnl
      421 kilwqeldmy yeadwgegle hnrfmvhlnn erlyeflagl nreldevrgr ilgrsplpti
      481 geafaevrre ekrrlvmmgd skepkpmtpi snrptetsal iskgpqpqkq ragndsgstr
      541 pwcshcnrvg htkekcfklh gypekkqkdn ktamlsstta ddvldvrltk tqletlhkil
      601 gtptthgsla tqgdstlfht ytpchnksri riadgsyspv agigevqmte nfsldkvlhi
      661 pnls
//
LOCUS       XP_016707397             619 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate isomerase, cytosolic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707397
VERSION     XP_016707397.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707397.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..619
                     /product="glucose-6-phosphate isomerase, cytosolic isoform
                     X2"
                     /calculated_mol_wt=68711
     Region          35..587
                     /region_name="PLN02649"
                     /note="glucose-6-phosphate isomerase"
                     /db_xref="CDD:215351"
     CDS             1..619
                     /gene="LOC107922074"
                     /coded_by="XM_016851908.2:114..1973"
                     /db_xref="GeneID:107922074"
ORIGIN      
        1 mpfrpshsll dcellnlasa fcqlqlpfff iplvemastt licdtqpwkd lkahtedikk
       61 thlrdlmndk ercesmmvef dgmfldysrq catletidkl yklaeaaslk qqinrmysge
      121 hinstenrsv lhvalraprd avinsdgknv vpdvwnvldk ikdfsekvrn gswvgatgkp
      181 lkdviaigig gsflgplfvh aalqtdpeav efakgrqlrf lanvdpidva rniaglnpet
      241 tlvvvvsktf ttaetmlnar tlrewissal gpsavakhmv avstnltlve kfgidpnnaf
      301 afwdwvggry svcsavgvlp lslqygfsiv ekflkgassi dehfrsapfe knipvllgll
      361 svwnvsflgy parailpysq alekfaphiq qvsmesngkg vsidgvplpy eageidfgep
      421 gtngqhsfyq lihqgrvipc dfigivksqq pvylkgevvs nhdelmsnff aqpdalaygk
      481 taeqllkenv sqhliphktf sgnrpslsll lpslnaynig qllasyehrv tvegfvwgin
      541 sfdqwgvelg kslatqvrkq lnasrtksep vegfnfsttt lltrylqrwr ydlseileih
      601 gnlgkkmiip pssqmhthv
//
LOCUS       XP_016707398             603 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate isomerase, cytosolic isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707398
VERSION     XP_016707398.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851909.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707398.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..603
                     /product="glucose-6-phosphate isomerase, cytosolic isoform
                     X3"
                     /calculated_mol_wt=66601
     Region          35..593
                     /region_name="PLN02649"
                     /note="glucose-6-phosphate isomerase"
                     /db_xref="CDD:215351"
     CDS             1..603
                     /gene="LOC107922074"
                     /coded_by="XM_016851909.2:122..1933"
                     /db_xref="GeneID:107922074"
ORIGIN      
        1 mpfrpshsll dcellnlasa fcqlqlpfff iplvemastt licdtqpwkd lkahtedikk
       61 thlrdlmndk ercesmmvef dgmfldysrq catletidkl yklaeaaslk qqinrmysge
      121 hinstenrsv lhvalraprd avinsdgknv vpdvwnvldk ikdfsekvrn gswvgatgkp
      181 lkdviaigig gsflgplfvh aalqtdpeav efakgrqlrf lanvdpidva rniaglnpet
      241 tlvvvvsktf ttaetmlnar tlrewissal gpsavakhmv avstnltlve kfgidpnnaf
      301 afwdwvggry svcsavgvlp lslqygfsiv ekflkgassi dehfrsapfe knipvllgll
      361 svwnvsflgy parailpysq alekfaphiq qvsmesngkg vsidgvplpy eageidfgep
      421 gtngqhsfyq lihqgrvipc dfigivksqq pvylkgevvs nhdelmsnff aqpdalaygk
      481 taeqllkenv sqhliphktf sgnrpslsll lpslnaynig qllasyehrv tvegfvwgin
      541 sfdqwgvelg kslatqvrkq lnasrtksep vegfnfsttt lltrylqass dipaepptll
      601 pri
//
LOCUS       XP_040943197             596 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate isomerase, cytosolic isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943197
VERSION     XP_040943197.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087263.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..596
                     /product="glucose-6-phosphate isomerase, cytosolic isoform
                     X4"
                     /calculated_mol_wt=66266
     Region          35..564
                     /region_name="PLN02649"
                     /note="glucose-6-phosphate isomerase"
                     /db_xref="CDD:215351"
     CDS             1..596
                     /gene="LOC107922074"
                     /coded_by="XM_041087263.1:118..1908"
                     /db_xref="GeneID:107922074"
ORIGIN      
        1 mpfrpshsll dcellnlasa fcqlqlpfff iplvemastt licdtqpwkd lkahtedikk
       61 thlrdlmndk ercesmmvef dgmfldysrq catletidkl yklaeaaslk qqinrmysge
      121 hinstenrsv lhvalraprd avinsdgknv vpdvwnvldk ikdfsekvrn gswvgatgkp
      181 lkdviaigig gsflgplfvh aalqtdpeav efakgrqlrf lanvdpidva rniaglnpet
      241 tlvvvvsktf ttaetmlnar tlrewissal gpsavakhmv avstnltlve kfgidpnnaf
      301 afwdwvggry svcsavgvlp lslqygfsiv ekflkgassi dehfrsapfe knipvllgll
      361 svwnvsflgy parailpysq alekfaphiq qvsmesngkg vsidgvplpy eageidfgep
      421 gtngqhsfyq lihqgrvipc dfigivksqq pvylkgevvs nhdelmsnff aqpdalaygk
      481 taeqllkenv sqhliphkll asyehrvtve gfvwginsfd qwgvelgksl atqvrkqlna
      541 srtksepveg fnfstttllt rylqrwrydl seileihgnl gkkmiippss qmhthv
//
LOCUS       XP_040943198             584 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate isomerase, cytosolic isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040943198
VERSION     XP_040943198.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087264.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..584
                     /product="glucose-6-phosphate isomerase, cytosolic isoform
                     X5"
                     /calculated_mol_wt=64691
     Region          1..552
                     /region_name="PLN02649"
                     /note="glucose-6-phosphate isomerase"
                     /db_xref="CDD:215351"
     CDS             1..584
                     /gene="LOC107922074"
                     /coded_by="XM_041087264.1:147..1901"
                     /db_xref="GeneID:107922074"
ORIGIN      
        1 masttlicdt qpwkdlkaht edikkthlrd lmndkerces mmvefdgmfl dysrqcatle
       61 tidklyklae aaslkqqinr mysgehinst enrsvlhval raprdavins dgknvvpdvw
      121 nvldkikdfs ekvrngswvg atgkplkdvi aigiggsflg plfvhaalqt dpeavefakg
      181 rqlrflanvd pidvarniag lnpettlvvv vsktfttaet mlnartlrew issalgpsav
      241 akhmvavstn ltlvekfgid pnnafafwdw vggrysvcsa vgvlplslqy gfsivekflk
      301 gassidehfr sapfeknipv llgllsvwnv sflgyparai lpysqalekf aphiqqvsme
      361 sngkgvsidg vplpyeagei dfgepgtngq hsfyqlihqg rvipcdfigi vksqqpvylk
      421 gevvsnhdel msnffaqpda laygktaeql lkenvsqhli phktfsgnrp slslllpsln
      481 aynigqllas yehrvtvegf vwginsfdqw gvelgkslat qvrkqlnasr tksepvegfn
      541 fstttlltry lqrwrydlse ileihgnlgk kmiippssqm hthv
//
LOCUS       XP_040943199             580 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate isomerase, cytosolic isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040943199
VERSION     XP_040943199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087265.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..580
                     /product="glucose-6-phosphate isomerase, cytosolic isoform
                     X6"
                     /calculated_mol_wt=64156
     Region          35..570
                     /region_name="PLN02649"
                     /note="glucose-6-phosphate isomerase"
                     /db_xref="CDD:215351"
     CDS             1..580
                     /gene="LOC107922074"
                     /coded_by="XM_041087265.1:114..1856"
                     /db_xref="GeneID:107922074"
ORIGIN      
        1 mpfrpshsll dcellnlasa fcqlqlpfff iplvemastt licdtqpwkd lkahtedikk
       61 thlrdlmndk ercesmmvef dgmfldysrq catletidkl yklaeaaslk qqinrmysge
      121 hinstenrsv lhvalraprd avinsdgknv vpdvwnvldk ikdfsekvrn gswvgatgkp
      181 lkdviaigig gsflgplfvh aalqtdpeav efakgrqlrf lanvdpidva rniaglnpet
      241 tlvvvvsktf ttaetmlnar tlrewissal gpsavakhmv avstnltlve kfgidpnnaf
      301 afwdwvggry svcsavgvlp lslqygfsiv ekflkgassi dehfrsapfe knipvllgll
      361 svwnvsflgy parailpysq alekfaphiq qvsmesngkg vsidgvplpy eageidfgep
      421 gtngqhsfyq lihqgrvipc dfigivksqq pvylkgevvs nhdelmsnff aqpdalaygk
      481 taeqllkenv sqhliphkll asyehrvtve gfvwginsfd qwgvelgksl atqvrkqlna
      541 srtksepveg fnfstttllt rylqassdip aepptllpri
//
LOCUS       XP_016707330            1670 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707330
VERSION     XP_016707330.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851841.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707330.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1670
                     /product="protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1"
                     /calculated_mol_wt=182918
     Region          562..619
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            576..592
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(586,591..592)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1670
                     /gene="LOC107922016"
                     /coded_by="XM_016851841.2:270..5282"
                     /db_xref="GeneID:107922016"
ORIGIN      
        1 mahtsasdsr rhltvnphhp iskdvqgsdn piplspqwll skpgenklgm gtmenhpvpy
       61 pahggrsevi kpsgngegmh gtpkkdvfrp slldmetgrr drwrdeerdt hsalrkdhwr
      121 dgdkelsdnr rmdrwadnlp srqfgearra pterwtdsgn rdsnydqkre skwnsrwgpd
      181 dknneksrdk wvdsgrdgdm lldkglphls shgkdvkegd hyrpwrstss qsrgrgepph
      241 hqaltpskqv ptfsygrgrg eshsspfsag hgrgssggnt gasipsynqt lgnisnrsei
      301 dhgepsplry srkklldlym rtdmriyqnl veellsvpsl tqneslepla lcapssdeml
      361 vlkgidkgdi tssgapqmpk dgsasrntte fthsrrnkig sredlppavd dckeetsdip
      421 nssysqlekh kgypdakfis ednkvlfkrd eelpisress iqvtnsvnpg tmwrtssfge
      481 rsptvthdlk eipndarsrt pdmswsqpqk dminqresnv lnssyaraea nwqssedpil
      541 krqpsgvlar epeprklpap edlvlhykdp qgeiqgpfsg idilswfeag yfgidlevrl
      601 asapkdslfs llgdvmphlr akarpppgfg vpkqgelsdl psrpnysspg kvhagtsein
      661 mirneprpat eaenrflesl msggmsnpsq glqgyvpqfs csgsqrlqap tppsltsllg
      721 qtmdkssgil kpekfipstl sqdsqllnml qqqylmqqlq pqtpvptpem lllekimllk
      781 qqqkleeqqq llrqqqllsq vlqehqskqh fgepsyvhlq tttiptghss mdpsrlqpsl
      841 qnvlqigsqi pgnqdehahn fmnlppqvsw dssyavssgs ppvllpheiv ssincqqswg
      901 tnapelvngi qpplpvttiv esspslevnl ssqeaslvqe plasechalp meqpldytqk
      961 ideiapvvpt vddatcgtle hheiatarts ktdipinegv lstdsidelp vgrdkgndqp
     1021 svvreaknve ahevrkasek ksrkqkssks qasdlakglp kastlvqlkp seteepvvgd
     1081 sntaghnidg msqgkteenk srnapmdssy aksfsaanig vlddetketk geaklssspl
     1141 qnpaavrawk papgfkaksl leiqqeeqrk aqtevavsel tssvnslsls tpwagvvssl
     1201 epkvsrvskk dadisesaiv kpesslisvs kksplhdlla eevlaksrer dadvpgtist
     1261 ssahvtttnv eptdndnfie aketkrsrkk sakskgtgak vsgppstada vlvsastiek
     1321 vkssrpahve mellpsipsg pslgdfvpwk eeqvnpssap awsadskklp kptslrdiqk
     1381 eqkrnssvqp tnpiptphks qpsqstpagv sswsftassp lktaspiqin shathskhkg
     1441 dddlfwgpid qtkqetkqgd fpllanvggw gtkstpakgt asgalsrqks sgraiertls
     1501 sspasaqsfl kgksdmltkh seamdfrdwc esecvrligt kdtsvlefcl kqsrseaeil
     1561 lvenlgsfdp nhefiekfln ykellpadvi eiafqsrhdr kfaelgsgyv nfsnasvanf
     1621 daevgvgldg sskgggkkkg kkgkkvspav lgfnvvsnri mmgeiqtved
//
LOCUS       XP_040943200            1801 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943200
VERSION     XP_040943200.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087266.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1801
                     /product="protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
                     isoform X1"
                     /calculated_mol_wt=197608
     Region          565..622
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            579..595
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(589,594..595)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1801
                     /gene="LOC107922029"
                     /coded_by="XM_041087266.1:129..5534"
                     /db_xref="GeneID:107922029"
ORIGIN      
        1 mahtsasdsr rlltvnpphp iskvsrdvqg sdnpiplspq wllskpgenk peigtmenhs
       61 vpypshggrs evmkpsgnge gihdtpkkdv frpslldmet grrdrwrdee rdthsslrkd
      121 hwrdgdkels dtcrvdrlvd nlpsrqfgea rrapterwtd sgnrdsnydq kreskwntrw
      181 gpddknners rdkwadsgrd gdmpldkglp hlsshgkdvr egdhyrpwrs tssqsrgrge
      241 pphhqaltps kqvptfsygr grgeshpstf sagrgrgssg gnsgasipsh rqtlgtisdk
      301 geidhgepsp lqysrkkmld lymrtdlriy qklieellsv psltqneple plalcapnsd
      361 emlvlkgidr gditssgspq mpkdgpasrn steythprrn kigsredipp avgdckeess
      421 dipnsnysql ekhkgypdtk fkyednrvlf krdeevpisk essiqvpnsv npgtmwrtss
      481 fgersptvth dwkeipndar srtpdmswsq pqkdminqre snvmnssyar deanwqssed
      541 pilmrqpsgi lvrepeprkl papedlilhy kdpqgeiqgp fsgidilswf eagyfgldle
      601 vrlasapkds pfsllgdvmp hlrakarppp gfgvpkqgel sdlssrpnys spgkvhagas
      661 einmirnepr qateaenrfl eslmsggmsn psqglqgyvp nnpssippsg iengsdlyll
      721 grrmtlerqm slpkpypywq grdgaslvpk pdiisespmp hakllpsltd ntpqlppqaa
      781 dlmsilqglp drsapgvnns vsswanfpaq galdthqeki elhhaqnfpn qasfgiqqqr
      841 lqaptppslt sllgqtmdkp sgilqpekfi stssqdpqll nmlqqqylmq qlqpqtpvpt
      901 pqmlllekmm llkqqqklee qqqllrqqql lsqvlqeqsq qhlgepsfgh lqtttmqtgn
      961 ssmdparpqs spqdilqigs qipgnqdeha ynmnlsqqvs rdtsyavssg sppvllphem
     1021 lssincqksw gtnapelvng mqqslpvttn vveslpslev klssqeaspv keplltsdsh
     1081 altveqppec akkigeivpv vhpvndvnrg tlegheitsa rtsktdtpin ecvqptgaid
     1141 elqvgreksn dqpsvvrevk nveapevrka sekksrkqks sksqasdpak glskasplvq
     1201 skpseteesv vgdsntaghn idgmsrgkke enksrnapmd sdyaksfsaa nvgvvddetk
     1261 epkgeiqpss pspvqnptvq pairawkpap gfkaksllei qqeeqrraqt eitvsevtss
     1321 vnslsvstpw agvvsslepk vsresqrdad isesaivkpe slnslskkns sldllpeevl
     1381 aksrerdadv pgtttsahvt ttiveptdnd nfieaketkk srkksakakg vgakvsgppn
     1441 tadavlvsas tvekgkssrp aqaekellps ipsgpslgdf vpwkeeqinp spapawsads
     1501 kklskptslr diqkeqkrns svqptnpimt phksqssqst pagvsswsit ssspsktasp
     1561 lqinshasqs kykgdddlfw gpidqtkqet kqgdfpllan agsrgtkstp akgtasgvls
     1621 rqrssgravd rslssspasa qsslkgrsdm ltkhseamdf rdwcegecvr ligtkdtsfl
     1681 efclkqsrse aeillvenlg sfdpnhefie kflnykells advleiafqn rydrkfmemg
     1741 tgnvnsgnts vdnldqdvgd gsskgggkkk gkkgkkvspa vlgfnvvsnr immgeiqtve
     1801 d
//
LOCUS       XP_016707342            1798 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707342
VERSION     XP_016707342.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707342.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1798
                     /product="protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
                     isoform X2"
                     /calculated_mol_wt=197265
     Region          562..619
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            576..592
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(586,591..592)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1798
                     /gene="LOC107922029"
                     /coded_by="XM_016851853.2:129..5525"
                     /db_xref="GeneID:107922029"
ORIGIN      
        1 mahtsasdsr rlltvnpphp iskdvqgsdn piplspqwll skpgenkpei gtmenhsvpy
       61 pshggrsevm kpsgngegih dtpkkdvfrp slldmetgrr drwrdeerdt hsslrkdhwr
      121 dgdkelsdtc rvdrlvdnlp srqfgearra pterwtdsgn rdsnydqkre skwntrwgpd
      181 dknnersrdk wadsgrdgdm pldkglphls shgkdvregd hyrpwrstss qsrgrgepph
      241 hqaltpskqv ptfsygrgrg eshpstfsag rgrgssggns gasipshrqt lgtisdkgei
      301 dhgepsplqy srkkmldlym rtdlriyqkl ieellsvpsl tqneplepla lcapnsdeml
      361 vlkgidrgdi tssgspqmpk dgpasrnste ythprrnkig sredippavg dckeessdip
      421 nsnysqlekh kgypdtkfky ednrvlfkrd eevpiskess iqvpnsvnpg tmwrtssfge
      481 rsptvthdwk eipndarsrt pdmswsqpqk dminqresnv mnssyardea nwqssedpil
      541 mrqpsgilvr epeprklpap edlilhykdp qgeiqgpfsg idilswfeag yfgldlevrl
      601 asapkdspfs llgdvmphlr akarpppgfg vpkqgelsdl ssrpnysspg kvhagasein
      661 mirneprqat eaenrflesl msggmsnpsq glqgyvpnnp ssippsgien gsdlyllgrr
      721 mtlerqmslp kpypywqgrd gaslvpkpdi isespmphak llpsltdntp qlppqaadlm
      781 silqglpdrs apgvnnsvss wanfpaqgal dthqekielh haqnfpnqas fgiqqqrlqa
      841 ptppsltsll gqtmdkpsgi lqpekfists sqdpqllnml qqqylmqqlq pqtpvptpqm
      901 lllekmmllk qqqkleeqqq llrqqqllsq vlqeqsqqhl gepsfghlqt ttmqtgnssm
      961 dparpqsspq dilqigsqip gnqdehaynm nlsqqvsrdt syavssgspp vllphemlss
     1021 incqkswgtn apelvngmqq slpvttnvve slpslevkls sqeaspvkep lltsdshalt
     1081 veqppecakk igeivpvvhp vndvnrgtle gheitsarts ktdtpinecv qptgaidelq
     1141 vgreksndqp svvrevknve apevrkasek ksrkqkssks qasdpakgls kasplvqskp
     1201 seteesvvgd sntaghnidg msrgkkeenk srnapmdsdy aksfsaanvg vvddetkepk
     1261 geiqpsspsp vqnptvqpai rawkpapgfk akslleiqqe eqrraqteit vsevtssvns
     1321 lsvstpwagv vsslepkvsr esqrdadise saivkpesln slskknssld llpeevlaks
     1381 rerdadvpgt ttsahvttti veptdndnfi eaketkksrk ksakakgvga kvsgppntad
     1441 avlvsastve kgkssrpaqa ekellpsips gpslgdfvpw keeqinpspa pawsadskkl
     1501 skptslrdiq keqkrnssvq ptnpimtphk sqssqstpag vsswsitsss psktasplqi
     1561 nshasqskyk gdddlfwgpi dqtkqetkqg dfpllanags rgtkstpakg tasgvlsrqr
     1621 ssgravdrsl ssspasaqss lkgrsdmltk hseamdfrdw cegecvrlig tkdtsflefc
     1681 lkqsrseaei llvenlgsfd pnhefiekfl nykellsadv leiafqnryd rkfmemgtgn
     1741 vnsgntsvdn ldqdvgdgss kgggkkkgkk gkkvspavlg fnvvsnrimm geiqtved
//
LOCUS       XP_040943201            1746 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943201
VERSION     XP_040943201.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087267.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1746
                     /product="protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
                     isoform X3"
                     /calculated_mol_wt=191668
     Region          510..567
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            524..540
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(534,539..540)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1746
                     /gene="LOC107922029"
                     /coded_by="XM_041087267.1:108..5348"
                     /db_xref="GeneID:107922029"
ORIGIN      
        1 menhsvpyps hggrsevmkp sgngegihdt pkkdvfrpsl ldmetgrrdr wrdeerdths
       61 slrkdhwrdg dkelsdtcrv drlvdnlpsr qfgearrapt erwtdsgnrd snydqkresk
      121 wntrwgpddk nnersrdkwa dsgrdgdmpl dkglphlssh gkdvregdhy rpwrstssqs
      181 rgrgepphhq altpskqvpt fsygrgrges hpstfsagrg rgssggnsga sipshrqtlg
      241 tisdkgeidh gepsplqysr kkmldlymrt dlriyqklie ellsvpsltq nepleplalc
      301 apnsdemlvl kgidrgdits sgspqmpkdg pasrnsteyt hprrnkigsr edippavgdc
      361 keessdipns nysqlekhkg ypdtkfkyed nrvlfkrdee vpiskessiq vpnsvnpgtm
      421 wrtssfgers ptvthdwkei pndarsrtpd mswsqpqkdm inqresnvmn ssyardeanw
      481 qssedpilmr qpsgilvrep eprklpaped lilhykdpqg eiqgpfsgid ilswfeagyf
      541 gldlevrlas apkdspfsll gdvmphlrak arpppgfgvp kqgelsdlss rpnysspgkv
      601 hagaseinmi rneprqatea enrfleslms ggmsnpsqgl qgyvpnnpss ippsgiengs
      661 dlyllgrrmt lerqmslpkp ypywqgrdga slvpkpdiis espmphakll psltdntpql
      721 ppqaadlmsi lqglpdrsap gvnnsvsswa nfpaqgaldt hqekielhha qnfpnqasfg
      781 iqqqrlqapt ppsltsllgq tmdkpsgilq pekfistssq dpqllnmlqq qylmqqlqpq
      841 tpvptpqmll lekmmllkqq qkleeqqqll rqqqllsqvl qeqsqqhlge psfghlqttt
      901 mqtgnssmdp arpqsspqdi lqigsqipgn qdehaynmnl sqqvsrdtsy avssgsppvl
      961 lphemlssin cqkswgtnap elvngmqqsl pvttnvvesl pslevklssq easpvkepll
     1021 tsdshaltve qppecakkig eivpvvhpvn dvnrgtlegh eitsartskt dtpinecvqp
     1081 tgaidelqvg reksndqpsv vrevknveap evrkasekks rkqkssksqa sdpakglska
     1141 splvqskpse teesvvgdsn taghnidgms rgkkeenksr napmdsdyak sfsaanvgvv
     1201 ddetkepkge iqpsspspvq nptvqpaira wkpapgfkak slleiqqeeq rraqteitvs
     1261 evtssvnsls vstpwagvvs slepkvsres qrdadisesa ivkpeslnsl skknssldll
     1321 peevlaksre rdadvpgttt sahvtttive ptdndnfiea ketkksrkks akakgvgakv
     1381 sgppntadav lvsastvekg kssrpaqaek ellpsipsgp slgdfvpwke eqinpspapa
     1441 wsadskklsk ptslrdiqke qkrnssvqpt npimtphksq ssqstpagvs swsitsssps
     1501 ktasplqins hasqskykgd ddlfwgpidq tkqetkqgdf pllanagsrg tkstpakgta
     1561 sgvlsrqrss gravdrslss spasaqsslk grsdmltkhs eamdfrdwce gecvrligtk
     1621 dtsflefclk qsrseaeill venlgsfdpn hefiekflny kellsadvle iafqnrydrk
     1681 fmemgtgnvn sgntsvdnld qdvgdgsskg ggkkkgkkgk kvspavlgfn vvsnrimmge
     1741 iqtved
//
LOCUS       XP_016706809             374 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706809
VERSION     XP_016706809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..374
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42184
     Region          128..366
                     /region_name="DUF620"
                     /note="Protein of unknown function (DUF620); pfam04788"
                     /db_xref="CDD:398452"
     CDS             1..374
                     /gene="LOC107921470"
                     /coded_by="XM_016851320.2:172..1296"
                     /db_xref="GeneID:107921470"
ORIGIN      
        1 mmirktcpip nlhnqdglet vlevpileem ytqlgtdaal lpwlnmralm ndnisstphl
       61 qaksdtefla llkivgapli pfqvhllnyt lssplrhcpf esssakyivq qfvaasgghl
      121 alssatsmca mgrvkmkgse mqagydsvql rrncevgdfv lwqknpdlwy lelvvagfkv
      181 sagsdgkvaw nqstsqpgha nrgpprplrr ffqgldprst aslfkeavcv gertinnedc
      241 filrletasn vlkeqssaqt eiihhtiwgy fsqrsgllmk fedrklvmmk ppnrkdrvfw
      301 ettvesvvqd ykqidgikva hsgntmttly rygkshnhkr kieetwride vdfnicglsd
      361 etflppahlk relq
//
LOCUS       XP_016706409             742 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA ligase 1 [Gossypium hirsutum].
ACCESSION   XP_016706409
VERSION     XP_016706409.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706409.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..742
                     /product="DNA ligase 1"
                     /calculated_mol_wt=83192
     CDS             1..742
                     /gene="LOC107921068"
                     /coded_by="XM_016850920.2:73..2301"
                     /db_xref="GeneID:107921068"
ORIGIN      
        1 mdsdedlelv spsdhtsspi qdrkfkrlkk lktvsenpsh fealdldspd aqvveepklg
       61 sgigsdsgfh gfdegnelnf gfdelgvdgn gsgsvakrvl dfdsmteevd gtgedqnkkm
      121 eirdleqkpd ekrpssyemr sketkkkkra kgvgdgdmpv lperrtaker rehlvqlrae
      181 sqrllretrd aafkpapivq kpissvleki rrrklevskk tyfaiddhdg nsskdmeetg
      241 senvgederg ndravmesee tivkhgisdt scsdeiknae nvsshenlsp qiaaseepkp
      301 afrapvndtq dlfsdsqtsd skdeladetp nspleevlap sflamnlkld saplddifsd
      361 eedndkenid phphesvdls panadpvkaf vdeeaeesdd sdndllrfqd ddneededse
      421 dleelrdmia tgfeekqsdi drrmelhqkl ldqqdaakta qllrkwgpkq retdllddeg
      481 feeddeedgd deedffened srpvnlrlhi kkikemipqm ftdkddmyis sddeevekkl
      541 vekslyekan qqaellpptk darstelfgy ikkvnnmpet rrkaktssfs nmlfmgkkgn
      601 epskssfigr gsncsipsst khgpgvlrsf vferednnss ttsiaesssd viqkenrpkk
      661 napsakfsns qiksssqprk demetssgaq lleilrrsss aqtsectgkr civgqtesif
      721 aafklekksi gtkrpnvsvk tl
//
LOCUS       XP_016706603             397 aa            linear   PLN 06-AUG-2024
DEFINITION  COP9 signalosome complex subunit 4 [Gossypium hirsutum].
ACCESSION   XP_016706603
VERSION     XP_016706603.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851114.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706603.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="COP9 signalosome complex subunit 4"
                     /calculated_mol_wt=45142
     Region          <92..374
                     /region_name="RPN5"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5071"
                     /db_xref="CDD:227403"
     Region          263..362
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..397
                     /gene="LOC107921235"
                     /coded_by="XM_016851114.2:117..1310"
                     /db_xref="GeneID:107921235"
ORIGIN      
        1 mesalanala ivdqrqkmeq ykhilstvfs sndivqakkf idhmlsddvp lmvsrqllqt
       61 fahelgrlkp daqkeishyt ldqiqprvvs feeqvlfire klaelyeseq qwskaaqils
      121 gidldsgmrv iddtfrlskc vqiarlyled ddavnaeafi nkasflisns qhevlilqyk
      181 vcyarildmk rkfleaalqy ydisqietrq igdeiideda leealsaavt ctilaaagpq
      241 rsrvlatlyk dercsklkiy pilqkvyler ilrkpeidaf aeelkpheka vlpdnftvld
      301 camiehnlls asklytnisf delgtllgip phkaekiasr miyedrmrgs idqveavihf
      361 edeteelqqw dqqvvgvcqa lndildsmak kgmavpv
//
LOCUS       XP_016706350             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706350
VERSION     XP_016706350.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850861.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706350.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14198
     Region          39..85
                     /region_name="SPT_ssu-like"
                     /note="Small subunit of serine palmitoyltransferase-like;
                     pfam11779"
                     /db_xref="CDD:463347"
     CDS             1..123
                     /gene="LOC107921008"
                     /coded_by="XM_016850861.2:153..524"
                     /db_xref="GeneID:107921008"
ORIGIN      
        1 myiefplanc csksqrissl sirsseplta papvrfrgmn wvqrkiflyn vtfglymldw
       61 werclfnilv ivlmwfifyn ssryvtvflk gdasegwncv cytvvsvvkt lpafilrfgv
      121 all
//
LOCUS       XP_040943203             652 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943203
VERSION     XP_040943203.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087269.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..652
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=72661
     Region          535..604
                     /region_name="DUF4091"
                     /note="Domain of unknown function (DUF4091); pfam13320"
                     /db_xref="CDD:463843"
     CDS             1..652
                     /gene="LOC107922530"
                     /coded_by="XM_041087269.1:462..2420"
                     /db_xref="GeneID:107922530"
ORIGIN      
        1 mdypgnsqdm avppvegvag ggtaygwndg glnvsnplkg sidptevpta dlvhvwclps
       61 tanvgpqevp rnlepvnlla arneresvql airpkvswsg ssvagvvqvq ccdlcsasgd
      121 rlivgqslkl rrvvpilgvp dalvpldlpi sqislqpget tavwvsidvp neqppglyeg
      181 eiiinatkad tesssqclgk aekhqlftel rncldalepi dgkpldevve rvkssttslr
      241 kvllsssfse ffsdngpvdm mdedaisnls vrvklsltvw dfiipttpsl pavfgisdtv
      301 iedrfgvghg ssewydaleq hfkwllqyri spyfcrwgds mrvltytspw padhpksdey
      361 fsdprlaaya vphspvvscn daakdylqke ieilrtkshw kkayfylwde plnmeqyesl
      421 cnmasevhay apdarvltty ycgpsdapla ptpfeaflkv pkflrphtqi yctsewvfgn
      481 redlvkdvis elhpengeew wtyvcmgpsd phpnwhlgmr gtqhravmwr vwkeggtgfl
      541 ywgancyeka tvpsaeirfr rglppgdgvl yypgevfsss kkpvaslrle rilsglqdfe
      601 ylklyasryg keealtllek tgvylgpery thehmaidim rgeifsscrs cs
//
LOCUS       XP_040943204             613 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943204
VERSION     XP_040943204.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087270.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..613
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=68042
     Region          535..598
                     /region_name="DUF4091"
                     /note="Domain of unknown function (DUF4091); pfam13320"
                     /db_xref="CDD:463843"
     CDS             1..613
                     /gene="LOC107922530"
                     /coded_by="XM_041087270.1:241..2082"
                     /db_xref="GeneID:107922530"
ORIGIN      
        1 mdypgnsqdm avppvegvag ggtaygwndg glnvsnplkg sidptevpta dlvhvwclps
       61 tanvgpqevp rnlepvnlla arneresvql airpkvswsg ssvagvvqvq ccdlcsasgd
      121 rlivgqslkl rrvvpilgvp dalvpldlpi sqislqpget tavwvsidvp neqppglyeg
      181 eiiinatkad tesssqclgk aekhqlftel rncldalepi dgkpldevve rvkssttslr
      241 kvllsssfse ffsdngpvdm mdedaisnls vrvklsltvw dfiipttpsl pavfgisdtv
      301 iedrfgvghg ssewydaleq hfkwllqyri spyfcrwgds mrvltytspw padhpksdey
      361 fsdprlaaya vphspvvscn daakdylqke ieilrtkshw kkayfylwde plnmeqyesl
      421 cnmasevhay apdarvltty ycgpsdapla ptpfeaflkv pkflrphtqi yctsewvfgn
      481 redlvkdvis elhpengeew wtyvcmgpsd phpnwhlgmr gtqhravmwr vwkeggtgfl
      541 ywgancyeka tvpsaeirfr rglppgdgvl yypgevfsss kkpvaslrle rilsglqdpr
      601 layvldmsvn lna
//
LOCUS       XP_016706578             507 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 734A1 [Gossypium hirsutum].
ACCESSION   XP_016706578
VERSION     XP_016706578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851089.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..507
                     /product="cytochrome P450 734A1"
                     /calculated_mol_wt=58237
     Region          80..499
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,210,314..315,318..319,322..323,326,377,
                     386,388,411,445..447,451..455,458..459)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(232..233,314,317..318,322,384..387)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..507
                     /gene="LOC107921208"
                     /coded_by="XM_016851089.2:74..1597"
                     /db_xref="GeneID:107921208"
ORIGIN      
        1 mthlilvlva vfcillfkfa yntiwipfri qnhfkkqgvt gpgyrpifgn mpeirrlfee
       61 amskpsplhd gdhdvlprva pfyhkwsniy gkpflywsgs qprlaisdpd likeitmntg
      121 ggsfdktgfd pkgkilfgqg lialfgqqwt lhrrilnrpf rmervkecwl pdivaetckm
      181 lekweerrag rdefemevfk qlhdlsadii srtafgtfse qgkqifllqe qqmqffslav
      241 eslnipglrf lptknsremw rvwrldketn esiraliran netreesssf lsllmgsdee
      301 erlgeeeiig efktfyfagk etaanalawa llllglnpew qdkareevir vlgsnkvpaa
      361 enlkdlkivn miidetlrly ppivmlmrka ykdvklgniy ipagtelyla laavhhdthi
      421 wgndahkfnp drfkesrkhl asfipyglgp rfcvgqtlat iemktilami irqyslavsp
      481 tyvhapklli slepqygvql lltrttl
//
LOCUS       XP_016706295             392 aa            linear   PLN 06-AUG-2024
DEFINITION  lysophospholipid acyltransferase LPEAT1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706295
VERSION     XP_016706295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850806.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..392
                     /product="lysophospholipid acyltransferase LPEAT1 isoform
                     X1"
                     /calculated_mol_wt=43493
     Region          141..371
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(188,191,193,207..210,267..269)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..392
                     /gene="LOC107920970"
                     /coded_by="XM_016850806.2:179..1357"
                     /db_xref="GeneID:107920970"
ORIGIN      
        1 mgselkdlns kpaktqqpdp ndddasakdd rpllkstass aaediqelek kfaafvrndv
       61 ygslgcgklp lkeklllgia lvtllplrll lvmsilvlyy lickiftlcs apnleeeqed
      121 yahlggcrra vilqsgryls rlllfmvgfy winethkdsa ntqdnsktes tkkqseervr
      181 pgaivsnhls yldvlyhmss sfpsfvakks vsklplvgli gkclgcvfvq reskssdfkg
      241 vagivtdrvr nahqnelapm mllfpegttt ngdfllpfkt gaflagapvm pvilrysyrr
      301 fspawesisg vrhvvfllcq fvnnlevtrl piyhpsqqek dnpklyannv rklmaaegdl
      361 ivsdiglaek riylaalngn nrlpsvlhqk nd
//
LOCUS       XP_016706296             384 aa            linear   PLN 06-AUG-2024
DEFINITION  lysophospholipid acyltransferase LPEAT1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706296
VERSION     XP_016706296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850807.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..384
                     /product="lysophospholipid acyltransferase LPEAT1 isoform
                     X2"
                     /calculated_mol_wt=42475
     Region          141..371
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(188,191,193,207..210,267..269)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..384
                     /gene="LOC107920970"
                     /coded_by="XM_016850807.2:179..1333"
                     /db_xref="GeneID:107920970"
ORIGIN      
        1 mgselkdlns kpaktqqpdp ndddasakdd rpllkstass aaediqelek kfaafvrndv
       61 ygslgcgklp lkeklllgia lvtllplrll lvmsilvlyy lickiftlcs apnleeeqed
      121 yahlggcrra vilqsgryls rlllfmvgfy winethkdsa ntqdnsktes tkkqseervr
      181 pgaivsnhls yldvlyhmss sfpsfvakks vsklplvgli gkclgcvfvq reskssdfkg
      241 vagivtdrvr nahqnelapm mllfpegttt ngdfllpfkt gaflagapvm pvilrysyrr
      301 fspawesisg vrhvvfllcq fvnnlevtrl piyhpsqqek dnpklyannv rklmaaegdl
      361 ivsdiglaek riylaalngl lgqs
//
LOCUS       XP_016706297             314 aa            linear   PLN 06-AUG-2024
DEFINITION  lysophospholipid acyltransferase LPEAT1 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016706297
VERSION     XP_016706297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850808.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="lysophospholipid acyltransferase LPEAT1 isoform
                     X3"
                     /calculated_mol_wt=34629
     Region          141..>312
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(188,191,193,207..210,267..269)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..314
                     /gene="LOC107920970"
                     /coded_by="XM_016850808.2:180..1124"
                     /db_xref="GeneID:107920970"
ORIGIN      
        1 mgselkdlns kpaktqqpdp ndddasakdd rpllkstass aaediqelek kfaafvrndv
       61 ygslgcgklp lkeklllgia lvtllplrll lvmsilvlyy lickiftlcs apnleeeqed
      121 yahlggcrra vilqsgryls rlllfmvgfy winethkdsa ntqdnsktes tkkqseervr
      181 pgaivsnhls yldvlyhmss sfpsfvakks vsklplvgli gkclgcvfvq reskssdfkg
      241 vagivtdrvr nahqnelapm mllfpegttt ngdfllpfkt gaflagapvm pvilrysyrr
      301 fspawesisg vris
//
LOCUS       XP_016708123             238 aa            linear   PLN 06-AUG-2024
DEFINITION  deSI-like protein At4g17486 [Gossypium hirsutum].
ACCESSION   XP_016708123
VERSION     XP_016708123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852634.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..238
                     /product="deSI-like protein At4g17486"
                     /calculated_mol_wt=27030
     Region          40..175
                     /region_name="Peptidase_C97"
                     /note="PPPDE putative peptidase domain; pfam05903"
                     /db_xref="CDD:461775"
     CDS             1..238
                     /gene="LOC107922552"
                     /coded_by="XM_016852634.2:436..1152"
                     /db_xref="GeneID:107922552"
ORIGIN      
        1 mefeskkkwk svlprlfknk sasrcffpkv kpatfspsct pvylnvydlt pmngyiywag
       61 lgifhsgvev ygveyafgah dyptsgvfev eprqcpgfkf kksifigtts ldphqvrdfv
      121 eryseryngd tyhlivkncn hfcddicqkl tgkriprwvn rlarigsmcn cilpeglkts
      181 vvrhdpnyep qdsekkrlrs pfsclasvsk qqktshesps rgclppssns nnsnnvlh
//
LOCUS       XP_016706487             603 aa            linear   PLN 06-AUG-2024
DEFINITION  J domain-containing protein required for chloroplast accumulation
            response 1 [Gossypium hirsutum].
ACCESSION   XP_016706487
VERSION     XP_016706487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850998.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..603
                     /product="J domain-containing protein required for
                     chloroplast accumulation response 1"
                     /calculated_mol_wt=67755
     CDS             1..603
                     /gene="LOC107921131"
                     /coded_by="XM_016850998.2:1143..2954"
                     /db_xref="GeneID:107921131"
ORIGIN      
        1 mdsnsdfddv fggpprrssv qetrysfcen messsgfrts detvvaprds wsglsekpvf
       61 geegmmmnrr ryskndffgd ifggsqslts sprkyemkdp fapvsqlmsp crplppkaep
      121 fatsapsqfs lpaklnkgtd ladpaskskd wslngssnya yspmsrfsgq anrdkdkemr
      181 snfqgnsked sissgipgnd nqfhfsiykw ankgglpfpi plrgnyrlke kdklqrcssa
      241 ngwiacesia mepkanlhnn fsstdrlslh dmnehgspnd mrnkddepvq iieeetykpp
      301 rkplnlffdn edvneqghde ikknaetsek kkkekkssen ldgksvkkqd knktatsnnv
      361 gtstmnvkss prnswdngkg rvrgnvkefi kifnqetspk pradnhssrl kqrhnvkpet
      421 epnismsekd ekfympnlqh kkkspdvpvg nqintngsak atvsdgskti aedptepsei
      481 nfsiedltpe eekvlpqhgi dyeeiqaida kirqwsngkq gnirsllstl qyvlwadsgw
      541 kpvplsdiie grtvkksyqk allclhpdkl qqkgaapykk yiaekvfdil qdawdqfntl
      601 gsi
//
LOCUS       XP_016707703             514 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 55 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707703
VERSION     XP_016707703.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="probable protein phosphatase 2C 55 isoform X1"
                     /calculated_mol_wt=54822
     Region          278..498
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     Site            order(279..280,295..297,426,492)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..514
                     /gene="LOC107922270"
                     /coded_by="XM_016852214.2:535..2079"
                     /db_xref="GeneID:107922270"
ORIGIN      
        1 mpstyfwrlr savqngiqrt ecgsqdsiev ligtgklgfg nyrffhslrf srlvdlrgll
       61 qpgtvlaars dshvanrrrn isvvgavsrt isvpsvsgpa fqvcgyhids vladssqiss
      121 vsklqskpma asgsgvvigg ylvdtsklkh ehlsssksst difysnksln scikarmslk
      181 npekpnnspi ygyfmysvgk rwcnfdsllg sgsrafhssl hclsagtvpd vsfdnsgsee
      241 qgnnssvsse ekisagktlk llsgscylph pdkedtgged ahficadeqa vgvadgvggw
      301 adlgvdagly srelmsnsvs aiqeepkgsi dparvlekah sstkakgsst aciialtdqg
      361 lhainlgdsg fmvvrdgcti frspvqqhdf nftyqlesgs ngdlpssgqv favpvapgdv
      421 iiagtdglfd nlynneitav vvhavraglg pqvtaqkiaa larqraqdrd rqtpfstaaq
      481 dagfryyggk ldditvvvsy itsseelmqe nksr
//
LOCUS       XP_016707704             514 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 55 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707704
VERSION     XP_016707704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852215.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="probable protein phosphatase 2C 55 isoform X1"
                     /calculated_mol_wt=54822
     Region          278..498
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     Site            order(279..280,295..297,426,492)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..514
                     /gene="LOC107922270"
                     /coded_by="XM_016852215.2:399..1943"
                     /db_xref="GeneID:107922270"
ORIGIN      
        1 mpstyfwrlr savqngiqrt ecgsqdsiev ligtgklgfg nyrffhslrf srlvdlrgll
       61 qpgtvlaars dshvanrrrn isvvgavsrt isvpsvsgpa fqvcgyhids vladssqiss
      121 vsklqskpma asgsgvvigg ylvdtsklkh ehlsssksst difysnksln scikarmslk
      181 npekpnnspi ygyfmysvgk rwcnfdsllg sgsrafhssl hclsagtvpd vsfdnsgsee
      241 qgnnssvsse ekisagktlk llsgscylph pdkedtgged ahficadeqa vgvadgvggw
      301 adlgvdagly srelmsnsvs aiqeepkgsi dparvlekah sstkakgsst aciialtdqg
      361 lhainlgdsg fmvvrdgcti frspvqqhdf nftyqlesgs ngdlpssgqv favpvapgdv
      421 iiagtdglfd nlynneitav vvhavraglg pqvtaqkiaa larqraqdrd rqtpfstaaq
      481 dagfryyggk ldditvvvsy itsseelmqe nksr
//
LOCUS       XP_016707705             511 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 55 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707705
VERSION     XP_016707705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852216.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..511
                     /product="probable protein phosphatase 2C 55 isoform X2"
                     /calculated_mol_wt=54450
     Region          278..498
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     Site            order(279..280,295..297,426,492)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..511
                     /gene="LOC107922270"
                     /coded_by="XM_016852216.2:535..2070"
                     /db_xref="GeneID:107922270"
ORIGIN      
        1 mpstyfwrlr savqngiqrt ecgsqdsiev ligtgklgfg nyrffhslrf srlvdlrgll
       61 qpgtvlaars dshvanrrrn isvvgavsrt isvpsvsgpa fqvcgyhids vladssqiss
      121 vsklqskpma asgsgvvigg ylvdtsklkh ehlsssksst difysnksln scikarmslk
      181 npekpnnspi ygyfmysvgk rwcnfdsllg sgsrafhssl hclsagtvpd vsfdnsgsee
      241 qgnnssvsse ekisagktlk llsgscylph pdkedtgged ahficadeqa vgvadgvggw
      301 adlgvdagly srelmsnsvs aiqeepkgsi dparvlekah sstkakgsst aciialtdqg
      361 lhainlgdsg fmvvrdgcti frspvqqhdf nftyqlesgs ngdlpssgqv favpvapgdv
      421 iiagtdglfd nlynneitav vvhavraglg pqvtaqkiaa larqraqdrd rqtpfstaaq
      481 dagfryyggk ldditvvvsy itsseeenks r
//
LOCUS       XP_040943206             511 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 55 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943206
VERSION     XP_040943206.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087272.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..511
                     /product="probable protein phosphatase 2C 55 isoform X2"
                     /calculated_mol_wt=54450
     Region          278..498
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     Site            order(279..280,295..297,426,492)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..511
                     /gene="LOC107922270"
                     /coded_by="XM_041087272.1:399..1934"
                     /db_xref="GeneID:107922270"
ORIGIN      
        1 mpstyfwrlr savqngiqrt ecgsqdsiev ligtgklgfg nyrffhslrf srlvdlrgll
       61 qpgtvlaars dshvanrrrn isvvgavsrt isvpsvsgpa fqvcgyhids vladssqiss
      121 vsklqskpma asgsgvvigg ylvdtsklkh ehlsssksst difysnksln scikarmslk
      181 npekpnnspi ygyfmysvgk rwcnfdsllg sgsrafhssl hclsagtvpd vsfdnsgsee
      241 qgnnssvsse ekisagktlk llsgscylph pdkedtgged ahficadeqa vgvadgvggw
      301 adlgvdagly srelmsnsvs aiqeepkgsi dparvlekah sstkakgsst aciialtdqg
      361 lhainlgdsg fmvvrdgcti frspvqqhdf nftyqlesgs ngdlpssgqv favpvapgdv
      421 iiagtdglfd nlynneitav vvhavraglg pqvtaqkiaa larqraqdrd rqtpfstaaq
      481 dagfryyggk ldditvvvsy itsseeenks r
//
LOCUS       XP_040943207             446 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 55 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943207
VERSION     XP_040943207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087273.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..446
                     /product="probable protein phosphatase 2C 55 isoform X3"
                     /calculated_mol_wt=47943
     Region          278..>377
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
     CDS             1..446
                     /gene="LOC107922270"
                     /coded_by="XM_041087273.1:535..1875"
                     /db_xref="GeneID:107922270"
ORIGIN      
        1 mpstyfwrlr savqngiqrt ecgsqdsiev ligtgklgfg nyrffhslrf srlvdlrgll
       61 qpgtvlaars dshvanrrrn isvvgavsrt isvpsvsgpa fqvcgyhids vladssqiss
      121 vsklqskpma asgsgvvigg ylvdtsklkh ehlsssksst difysnksln scikarmslk
      181 npekpnnspi ygyfmysvgk rwcnfdsllg sgsrafhssl hclsagtvpd vsfdnsgsee
      241 qgnnssvsse ekisagktlk llsgscylph pdkedtgged ahficadeqa vgvadgvggw
      301 adlgvdagly srelmsnsvs aiqeepkgsi dparvlekah sstkakgsst aciialtdqg
      361 lhainlgdsg fmvvrdgcti frspvqqhdf nftyqlesgs ngdlpssgqi rslqflllqe
      421 mlsllaqmdc sitctitkll qwwfmq
//
LOCUS       XP_040943208             100 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DA1-related 1 [Gossypium hirsutum].
ACCESSION   XP_040943208
VERSION     XP_040943208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087274.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..100
                     /product="protein DA1-related 1"
                     /calculated_mol_wt=11557
     CDS             1..100
                     /gene="LOC107921405"
                     /coded_by="XM_041087274.1:627..929"
                     /db_xref="GeneID:107921405"
ORIGIN      
        1 mwqeheneei draialslle esqkerniin desqleedeq laramqeslr fepppqyena
       61 ntfqpipihf pmgyricagc nieighgrff plpclqpsnf
//
LOCUS       XP_016706323             483 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 33 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706323
VERSION     XP_016706323.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850834.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706323.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="protein DETOXIFICATION 33 isoform X1"
                     /calculated_mol_wt=52424
     Region          33..466
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(271,275,303,306,385,389,416,442,446)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..483
                     /gene="LOC107920986"
                     /coded_by="XM_016850834.2:411..1862"
                     /db_xref="GeneID:107920986"
ORIGIN      
        1 maadtvplln erdgndinkg eklvswvkef gseskrlwhi agpviftalc qyslgaftlt
       61 fagrlseldl aavsvensvi aglsfgvmlg mgsaletlcg qaygagrlrm lgvymqrswv
      121 ilfvtacllv piyiwsppil vlfgetteis taagkfalwm lpqlfayaln fplqkflqaq
      181 rkvmvmawis avvlvlhvff swllilklgw gligaaitln tswwlivvgq flyilktksd
      241 gawsgfswla fvdlfgfvkl slasaimlcl efwylmmliv itghlsnplv pvdaisicmn
      301 ingwdamiai gfnaaisvrv snelgrgnaw laklsviivs itsvsigivc mivvfatrgy
      361 fpyffttsda vaeettklai llgitvllns lqpvlsgvav gggwqslvay inigcyyivg
      421 lpagillgft fgfgvmgiws gmiggivlqt lslivvislt nwnketveae rrikkwggps
      481 dge
//
LOCUS       XP_040943209             397 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 33 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943209
VERSION     XP_040943209.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087275.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="protein DETOXIFICATION 33 isoform X2"
                     /calculated_mol_wt=42941
     Region          33..380
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(185,189,217,220,299,303,330,356,360)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..397
                     /gene="LOC107920986"
                     /coded_by="XM_041087275.1:272..1465"
                     /db_xref="GeneID:107920986"
ORIGIN      
        1 maadtvplln erdgndinkg eklvswvkef gseskrlwhi agpviftalc qyslgaftlt
       61 fagrlseldl aavsvensvi aglsfgvmkf lqaqrkvmvm awisavvlvl hvffswllil
      121 klgwgligaa itlntswwli vvgqflyilk tksdgawsgf swlafvdlfg fvklslasai
      181 mlclefwylm mlivitghls nplvpvdais icmningwda miaigfnaai svrvsnelgr
      241 gnawlaklsv iivsitsvsi givcmivvfa trgyfpyfft tsdavaeett klaillgitv
      301 llnslqpvls gvavgggwqs lvayinigcy yivglpagil lgftfgfgvm giwsgmiggi
      361 vlqtlslivv isltnwnket veaerrikkw ggpsdge
//
LOCUS       XP_016707255             323 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog [Gossypium
            hirsutum].
ACCESSION   XP_016707255
VERSION     XP_016707255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851766.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..323
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /calculated_mol_wt=36773
     Region          8..304
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..323
                     /gene="LOC107921971"
                     /coded_by="XM_016851766.2:1530..2501"
                     /db_xref="GeneID:107921971"
ORIGIN      
        1 mpylelagfg lvaliwtfdl rndlisalve cwrsethtfh lpcgectvtl edvafqlglp
       61 idgsavtsvs viaeptalcy sllgvspdda eskftglrfs wlkakfehls inatkqevmc
      121 aarayimhii rgvlmpdann nrvhlmylpl ladlqnvrsy swgfavqtll yrelfrttkp
      181 dvvdiggclv llqswapyrm sflasvrhqp yvfplvnrwi fypgigrsyt vpiyrlmieq
      241 hagegfiwmp ywrpeitvvi pssahihshl wcinapiinf qtiewynedr vlrqfgciqy
      301 ildppmqlgk ihginkrgkh gnn
//
LOCUS       XP_016707176             520 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP82D47 [Gossypium hirsutum].
ACCESSION   XP_016707176
VERSION     XP_016707176.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851687.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707176.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="cytochrome P450 CYP82D47"
                     /calculated_mol_wt=59030
     Region          74..514
                     /region_name="CYP82"
                     /note="cytochrome P450 family 82; cd20654"
                     /db_xref="CDD:410747"
     Site            order(109,134,138,146,199,316,319..320,323..324,383,
                     387..388,390,452..455,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410747"
     Site            order(227,231,255,315,318..319,388)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410747"
     CDS             1..520
                     /gene="LOC107921852"
                     /coded_by="XM_016851687.2:77..1639"
                     /db_xref="GeneID:107921852"
ORIGIN      
        1 mdlfhsfssl ppilalsifl falvwilkts lksitqkrea peagnswpvi ghlhllrgpk
       61 pphivlsdma ekcgpiftik mgvhralivs dhktakeclt indkafasrp stlameylsy
      121 nhamfgfapy gnhwrqlrkl atlellsthr leqlrhvres eiktslkely qfweekkdgs
      181 dtvlvemkkw fksatlnvil rmivgkrips stndaesekw ktalkeffdl sgkfvvsdal
      241 pylrwfdigg derlmkkvrk eldevaegwl kdhkgkrssd klnksndgfm dvmlsiatdt
      301 qkhdadtink atclalilaa sdttmvtltw alslllnnkd elrklqeeld ihvgkdklve
      361 esdmenlvyl kaiiketlrl ypaapllvph esmedctvsg yhipagtrlf invyklqrdq
      421 rvwsdpcefr pqrfltthrd idfrgknfel ipfgsgrrmc pgvsfgiqvl elvlasvvqg
      481 felktpleea vdmseaigmt nlkatplqll vtprlpsccy
//
LOCUS       XP_040943210             397 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM16 [Gossypium hirsutum].
ACCESSION   XP_040943210
VERSION     XP_040943210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087276.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="B3 domain-containing protein REM16"
                     /calculated_mol_wt=45317
     Region          24..114
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(27,35,38,40,68,78,80..81,83..84)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          272..362
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(274,277,285,288,290,317,328,330..331,333..334)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..397
                     /gene="LOC107922557"
                     /coded_by="XM_041087276.1:943..2136"
                     /db_xref="GeneID:107922557"
ORIGIN      
        1 medtckdcrd weeeifwthf qsvhftqflh gdflqrleip ekfaknikkk lpetvtlkgp
       61 sgiiwdvrlt vddddtlffn ggwktfvkdh slvandflif kyngvshfdv lmfdgkslce
      121 kassyfvrkc mhtesdathq tkrkvnensd eilhnssqcg lesgpekstn ndmdarpsrk
      181 piksaaskkk irnldngtqs ihakqslvgk elptfpgevk verleteyeh ttmdgdsdvf
      241 glwhttgkrf vtqfektnvi lkaqealtne gfmiimkpth vgrrfymavp tawvakylpk
      301 dnadvilrmn krtwktrfyy hrsrdcggls ggwrnfvndn nleehdvcvf qpanigskpm
      361 ildvnifhvl qkavplsqad plpsspelia stpdmds
//
LOCUS       XP_016708130             397 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM16 [Gossypium hirsutum].
ACCESSION   XP_016708130
VERSION     XP_016708130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852641.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="B3 domain-containing protein REM16"
                     /calculated_mol_wt=45317
     Region          24..114
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(27,35,38,40,68,78,80..81,83..84)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          272..362
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(274,277,285,288,290,317,328,330..331,333..334)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..397
                     /gene="LOC107922557"
                     /coded_by="XM_016852641.2:175..1368"
                     /db_xref="GeneID:107922557"
ORIGIN      
        1 medtckdcrd weeeifwthf qsvhftqflh gdflqrleip ekfaknikkk lpetvtlkgp
       61 sgiiwdvrlt vddddtlffn ggwktfvkdh slvandflif kyngvshfdv lmfdgkslce
      121 kassyfvrkc mhtesdathq tkrkvnensd eilhnssqcg lesgpekstn ndmdarpsrk
      181 piksaaskkk irnldngtqs ihakqslvgk elptfpgevk verleteyeh ttmdgdsdvf
      241 glwhttgkrf vtqfektnvi lkaqealtne gfmiimkpth vgrrfymavp tawvakylpk
      301 dnadvilrmn krtwktrfyy hrsrdcggls ggwrnfvndn nleehdvcvf qpanigskpm
      361 ildvnifhvl qkavplsqad plpsspelia stpdmds
//
LOCUS       XP_016708132             397 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM16 [Gossypium hirsutum].
ACCESSION   XP_016708132
VERSION     XP_016708132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="B3 domain-containing protein REM16"
                     /calculated_mol_wt=45317
     Region          24..114
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(27,35,38,40,68,78,80..81,83..84)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          272..362
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(274,277,285,288,290,317,328,330..331,333..334)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..397
                     /gene="LOC107922557"
                     /coded_by="XM_016852643.2:269..1462"
                     /db_xref="GeneID:107922557"
ORIGIN      
        1 medtckdcrd weeeifwthf qsvhftqflh gdflqrleip ekfaknikkk lpetvtlkgp
       61 sgiiwdvrlt vddddtlffn ggwktfvkdh slvandflif kyngvshfdv lmfdgkslce
      121 kassyfvrkc mhtesdathq tkrkvnensd eilhnssqcg lesgpekstn ndmdarpsrk
      181 piksaaskkk irnldngtqs ihakqslvgk elptfpgevk verleteyeh ttmdgdsdvf
      241 glwhttgkrf vtqfektnvi lkaqealtne gfmiimkpth vgrrfymavp tawvakylpk
      301 dnadvilrmn krtwktrfyy hrsrdcggls ggwrnfvndn nleehdvcvf qpanigskpm
      361 ildvnifhvl qkavplsqad plpsspelia stpdmds
//
LOCUS       XP_040943211             397 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM16 [Gossypium hirsutum].
ACCESSION   XP_040943211
VERSION     XP_040943211.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087277.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="B3 domain-containing protein REM16"
                     /calculated_mol_wt=45317
     Region          24..114
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(27,35,38,40,68,78,80..81,83..84)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          272..362
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(274,277,285,288,290,317,328,330..331,333..334)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..397
                     /gene="LOC107922557"
                     /coded_by="XM_041087277.1:277..1470"
                     /db_xref="GeneID:107922557"
ORIGIN      
        1 medtckdcrd weeeifwthf qsvhftqflh gdflqrleip ekfaknikkk lpetvtlkgp
       61 sgiiwdvrlt vddddtlffn ggwktfvkdh slvandflif kyngvshfdv lmfdgkslce
      121 kassyfvrkc mhtesdathq tkrkvnensd eilhnssqcg lesgpekstn ndmdarpsrk
      181 piksaaskkk irnldngtqs ihakqslvgk elptfpgevk verleteyeh ttmdgdsdvf
      241 glwhttgkrf vtqfektnvi lkaqealtne gfmiimkpth vgrrfymavp tawvakylpk
      301 dnadvilrmn krtwktrfyy hrsrdcggls ggwrnfvndn nleehdvcvf qpanigskpm
      361 ildvnifhvl qkavplsqad plpsspelia stpdmds
//
LOCUS       XP_040943212             397 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein REM16 [Gossypium hirsutum].
ACCESSION   XP_040943212
VERSION     XP_040943212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087278.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..397
                     /product="B3 domain-containing protein REM16"
                     /calculated_mol_wt=45317
     Region          24..114
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(27,35,38,40,68,78,80..81,83..84)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          272..362
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(274,277,285,288,290,317,328,330..331,333..334)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..397
                     /gene="LOC107922557"
                     /coded_by="XM_041087278.1:357..1550"
                     /db_xref="GeneID:107922557"
ORIGIN      
        1 medtckdcrd weeeifwthf qsvhftqflh gdflqrleip ekfaknikkk lpetvtlkgp
       61 sgiiwdvrlt vddddtlffn ggwktfvkdh slvandflif kyngvshfdv lmfdgkslce
      121 kassyfvrkc mhtesdathq tkrkvnensd eilhnssqcg lesgpekstn ndmdarpsrk
      181 piksaaskkk irnldngtqs ihakqslvgk elptfpgevk verleteyeh ttmdgdsdvf
      241 glwhttgkrf vtqfektnvi lkaqealtne gfmiimkpth vgrrfymavp tawvakylpk
      301 dnadvilrmn krtwktrfyy hrsrdcggls ggwrnfvndn nleehdvcvf qpanigskpm
      361 ildvnifhvl qkavplsqad plpsspelia stpdmds
//
LOCUS       XP_016708111             388 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708111
VERSION     XP_016708111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852622.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..388
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44242
     CDS             1..388
                     /gene="LOC107922537"
                     /coded_by="XM_016852622.2:189..1355"
                     /db_xref="GeneID:107922537"
ORIGIN      
        1 mmsrrvfsfl lfflfsqils fafnplqsnn pqivqdviek ialkqkwele glnfsklels
       61 kvrfgtgkrc efrirfgkth llfkfpdevs slkkftkrss ndfldfvnei nssavlepft
      121 megpfelrls pghqasllfp lntshtdlkr vlvghgitlq vngaqeislf htfnlglpan
      181 engvkekssg ywpfshsfcr sllpvhvlrs vslaayrtrn pdahieahfp skdtiellpe
      241 kcygidgytk qpfpidsisl riarlqkilr tflgdrnnqk qflgslnvkt kaspivhfql
      301 elekeignne svrgmlaewr tkptverlwf dvmtrvegdk lkpllikkvr pfvsgdtvsw
      361 snllsnisft kfpsilvppe altldvkw
//
LOCUS       XP_016707533             813 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At4g33300 [Gossypium hirsutum].
ACCESSION   XP_016707533
VERSION     XP_016707533.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707533.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..813
                     /product="probable disease resistance protein At4g33300"
                     /calculated_mol_wt=92757
     Region          7..129
                     /region_name="RPW8"
                     /note="Arabidopsis broad-spectrum mildew resistance
                     protein RPW8; pfam05659"
                     /db_xref="CDD:398988"
     Region          179..>773
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          179..404
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          601..623
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          624..651
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          652..675
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          676..699
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          700..723
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          724..747
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          748..771
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..813
                     /gene="LOC107922161"
                     /coded_by="XM_016852044.2:420..2861"
                     /db_xref="GeneID:107922161"
ORIGIN      
        1 malnemfvge ivtellkqln aishkscfck ssadnlitsi qelfpiieel kysgvelpaf
       61 rqsqlnrfse tlrggielar kvlesgrwnv yknlqlvrkm eklekqvarf isgpmqahll
      121 advhhmrfet merfnrleqr ldsmktgsgr wveeavkrme vegdsnlggf sgiglelgkd
      181 kvkkmmierd dlnvvgiwgi ggsgkttlan eicrdnqvqs yfnnrilflt vsqspdleql
      241 rakiwgfitg neplnytrks qcewgsgpqa lvvlddvwsl pvleqlifrv ptyktlvisr
      301 fkfprrvvne vyevellged esmslfcrsa fgqnsippta netlvkqivd eckglplalk
      361 vigaslqdqp emywinarkr lsrgelices henklldrma isveclkkkv kecfmdlgsf
      421 pedkkipldv lvnmwveihn ideeeaftil melsdknllt lvkdaragea ycsyheicvt
      481 qhdvlrdlal hlsnkgevne rkrllmprrd telprdwekn adqpfnaqiv svqtgemrem
      541 dwfhmefpkt evlilnfcsd kyflppfidd mpklralivi nhgtteatle nfsvftnlan
      601 lqslwlekvs vpqlsnatvp lrnlrklsmv lckvsnsldp avldlpqifp rlselvidhc
      661 ddlvkiplsi ckvnslqsls ltnchrlrel padlgmlkkl qilrlsacpe lkmlppsige
      721 lvglkyldis ecvnlkclpk evgklvslek idmrdclqiv nlpthaalsn lkslqrvicd
      781 devfgqwrnl ektvpnlhvq iaekwysldw lns
//
LOCUS       XP_016706233             234 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MIZU-KUSSEI 1 [Gossypium hirsutum].
ACCESSION   XP_016706233
VERSION     XP_016706233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850744.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..234
                     /product="protein MIZU-KUSSEI 1"
                     /calculated_mol_wt=25998
     Region          72..232
                     /region_name="DUF617"
                     /note="Protein of unknown function, DUF617; pfam04759"
                     /db_xref="CDD:428109"
     CDS             1..234
                     /gene="LOC107920912"
                     /coded_by="XM_016850744.2:49..753"
                     /db_xref="GeneID:107920912"
ORIGIN      
        1 mppihsspyf qmdnpailsl lrptpgekhr kstsssggll rmfklfpmlt sgckmvallg
       61 rprkpmlkds attgtifgyr kgrvclaiqd dpysvpifvi elpmltsllq kemasdivri
      121 alesetkthk kkvleefvwa vfcngrkmgy sirrkqlsdd efhvmqllrg vsmgagvlps
      181 pndketvtad geltymrarf ervvgskdse afyminpdga asgpelsiff vrsn
//
LOCUS       XP_016706802             317 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706802
VERSION     XP_016706802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..317
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35719
     Region          104..291
                     /region_name="DUF1645"
                     /note="Protein of unknown function (DUF1645); pfam07816"
                     /db_xref="CDD:429678"
     CDS             1..317
                     /gene="LOC107921464"
                     /coded_by="XM_016851313.2:162..1115"
                     /db_xref="GeneID:107921464"
ORIGIN      
        1 mevvkpsspi psfdfnsapp spsrfgecff sapttplris efysefdrls imshnqtsss
       61 saipfdweek pklvgktkid dddeenfafd frqpllekty qlsaeelfdg gkiksfkppq
      121 vvdeydkksp flssqgkkii hafspskktn tedgrgrgre rahdilskns srratrslsp
      181 yrvsdeeden dqissnikqs sskgsssrkw rslrdlllfr saseghnrdt frkysssfir
      241 ksedhhhnss sfksvdssgs arskrkvsah elhyttnkaa sdnmkkktfl pykqgilgrl
      301 afipavgtpa ksynntm
//
LOCUS       XP_016703061            1211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703061
VERSION     XP_016703061.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847572.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703061.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=132141
     Region          950..1087
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..1211
                     /gene="LOC107918068"
                     /coded_by="XM_016847572.2:98..3733"
                     /db_xref="GeneID:107918068"
ORIGIN      
        1 mlryclrsrr rcylhytrrf sssspnsves pnnlknrqpv psqspppqyf qtqlstrpsa
       61 tvslsrnsvl alsatllsai vasvavlsan egnessdgnp sprrsplyds iehtmqksne
      121 sfrrivhqak qtsvaasvlw qslrsvmssa nhevragfel rvaslladia aanasrraai
      181 vnasggavvd wlletvavgk advcgtqaes aralayliad pdvrkdvlgr pgavsyllrf
      241 ifscqpqnks krhsgrssfd isdslkgrsm lvaaimdivt sncecvekes fkpwlpgnae
      301 mrdiaaavqv ieegdmhlde gerndddddg grgmkgigik ilegttaigl srttehmtld
      361 hsndtpseld rdtprtlalm nkhgssveqa nlsaavvpgl wddlhsqhva vpfaawalan
      421 wamaseinrs hieeldqdge avmcallape rsvkwhgslv arllledhnl plsdsvsdwa
      481 ssllstasha sknedislsq malsafivav ershqarrtv mekglelmrv takrtskhqq
      541 vqealakale llstedshls ieesqkwcgi llswvfgkss sneirssair ilsciledhg
      601 pssvpisqgw lalllndilv sskassvkeg idkvktqidq snilsagqta nqlavgvvsm
      661 agnwltgsvd tspladllsl dpfagpyknl kkdnppkldv adsalatlkg ikaltgicae
      721 dsllqdkitd lgllcllrry llrddyekla aieaydasra peaqervsst egevspsntn
      781 npssvrvppt ahirrhaarl lailsllpkv qkviaadeaw ckwledcadg kissindlki
      841 rsyakailln vichqqigid sinsgpengs rdgtsicpsy ddmiflinpe rphwkcpgkd
      901 qssvqkdkss snevdtnsta vtqvsdvads sksfnvsnnd sdseipqmdi vfvhglrggp
      961 yktwriaedk sstksglvek ideeagklgt fwpgewlsad fpqarlfslk yktnltqwsg
     1021 aslplqevss mllkklvaag igsrpvvfvt hslgglvvkq mlfkakaenm ddlvnntvgv
     1081 vfyscphfgs kladmpwrmg lvlrpaptig elrsgsprlv qlndflrrlh krqmlqvlsf
     1141 cetkvtpive gyggwafrme ivpiesaypg fgelvvlest dhinsckpls rsdpsytetl
     1201 eflrklkaqy t
//
LOCUS       XP_016703062            1211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016703062
VERSION     XP_016703062.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016847573.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016703062.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=132141
     Region          950..1087
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..1211
                     /gene="LOC107918068"
                     /coded_by="XM_016847573.2:99..3734"
                     /db_xref="GeneID:107918068"
ORIGIN      
        1 mlryclrsrr rcylhytrrf sssspnsves pnnlknrqpv psqspppqyf qtqlstrpsa
       61 tvslsrnsvl alsatllsai vasvavlsan egnessdgnp sprrsplyds iehtmqksne
      121 sfrrivhqak qtsvaasvlw qslrsvmssa nhevragfel rvaslladia aanasrraai
      181 vnasggavvd wlletvavgk advcgtqaes aralayliad pdvrkdvlgr pgavsyllrf
      241 ifscqpqnks krhsgrssfd isdslkgrsm lvaaimdivt sncecvekes fkpwlpgnae
      301 mrdiaaavqv ieegdmhlde gerndddddg grgmkgigik ilegttaigl srttehmtld
      361 hsndtpseld rdtprtlalm nkhgssveqa nlsaavvpgl wddlhsqhva vpfaawalan
      421 wamaseinrs hieeldqdge avmcallape rsvkwhgslv arllledhnl plsdsvsdwa
      481 ssllstasha sknedislsq malsafivav ershqarrtv mekglelmrv takrtskhqq
      541 vqealakale llstedshls ieesqkwcgi llswvfgkss sneirssair ilsciledhg
      601 pssvpisqgw lalllndilv sskassvkeg idkvktqidq snilsagqta nqlavgvvsm
      661 agnwltgsvd tspladllsl dpfagpyknl kkdnppkldv adsalatlkg ikaltgicae
      721 dsllqdkitd lgllcllrry llrddyekla aieaydasra peaqervsst egevspsntn
      781 npssvrvppt ahirrhaarl lailsllpkv qkviaadeaw ckwledcadg kissindlki
      841 rsyakailln vichqqigid sinsgpengs rdgtsicpsy ddmiflinpe rphwkcpgkd
      901 qssvqkdkss snevdtnsta vtqvsdvads sksfnvsnnd sdseipqmdi vfvhglrggp
      961 yktwriaedk sstksglvek ideeagklgt fwpgewlsad fpqarlfslk yktnltqwsg
     1021 aslplqevss mllkklvaag igsrpvvfvt hslgglvvkq mlfkakaenm ddlvnntvgv
     1081 vfyscphfgs kladmpwrmg lvlrpaptig elrsgsprlv qlndflrrlh krqmlqvlsf
     1141 cetkvtpive gyggwafrme ivpiesaypg fgelvvlest dhinsckpls rsdpsytetl
     1201 eflrklkaqy t
//
LOCUS       XP_016701264             341 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016701264
VERSION     XP_016701264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845775.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..341
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38305
     Region          237..304
                     /region_name="PAN_4"
                     /note="PAN domain; pfam14295"
                     /db_xref="CDD:433846"
     CDS             1..341
                     /gene="LOC107916521"
                     /coded_by="XM_016845775.2:246..1271"
                     /db_xref="GeneID:107916521"
ORIGIN      
        1 maregrgakw gghglgsgsg sgsgqcsykr itvivcsvni vialyvlhsl ysslyiysnk
       61 dhdvamhtsd hikqmeesvr irrasepiel vklvkrlkhg fsseesmaea elpqavknki
      121 tdeilqrlrs lrpnasvseq heavetwrnk klkeaknlal ggerldstll reeagnlvkv
      181 lesnwaalse eiglwipsei knqehndkpe dvedtddpeq ilagrpplpe crtelhtdyd
      241 gdcvrwglth hkesaadccq acldqakaak pgekkcniwv ycpsetgcys pdkyehkhme
      301 cwlkysekps lnfkdrypeg yrnshrnvpv ivpwvsgvis v
//
LOCUS       XP_040943213             208 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943213
VERSION     XP_040943213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087279.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=22726
     Region          <102..166
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
     CDS             1..208
                     /gene="LOC107917561"
                     /coded_by="XM_041087279.1:322..948"
                     /db_xref="GeneID:107917561"
ORIGIN      
        1 mssrsslkll lpladsaqvl nvlvipigtl laatlpfaan ppyllswlsp qistpdmlqp
       61 klfeklvten fetvpaklll qlatafeegg lrdrsgtffy knhlsksnvp vlaiagdqdl
      121 icppdavyet vklileplvt ykvfgepggp hfahydivga qllevvetss sfklysvffp
      181 hegksrlkkn lqaslalkil hqlvhiha
//
LOCUS       XP_040943214             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943214
VERSION     XP_040943214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087280.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=19681
     Region          <104..178
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..181
                     /gene="LOC107917561"
                     /coded_by="XM_041087280.1:322..867"
                     /db_xref="GeneID:107917561"
ORIGIN      
        1 mssrsslkll lpladsaqvl nvlvipigtl laatlpfaan ppyllswlsp qistpdmlqp
       61 klfeklvten fetvpaklll qlatafeegg lrdrsgtffy knhlsksnvp vlaiagdqdl
      121 icppdavyet vklileplvt ykvfgepggp hfahydivga qlavdlvypy iieflnhhda
      181 a
//
LOCUS       XP_016701334             411 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016701334
VERSION     XP_016701334.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845845.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701334.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..411
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45954
     Region          137..379
                     /region_name="DUF829"
                     /note="Eukaryotic protein of unknown function (DUF829);
                     pfam05705"
                     /db_xref="CDD:461719"
     CDS             1..411
                     /gene="LOC107916570"
                     /coded_by="XM_016845845.2:285..1520"
                     /db_xref="GeneID:107916570"
ORIGIN      
        1 mwgfggryyw grkesverrk ngggivvvfa wmssqekhlk nyvqlyaslg wdslvchsef
       61 lnmffpdkaa alalhllkel vqelkirpcp vvfasfsggp kacmykvlqm ieglcevqvn
      121 pddlqllkec fsghvfdssp vdftsdlgar fvvhptvlqm shpprmaswi angiasglda
      181 lflsrfeshr aeywqtlygs irmgapylil csetddlapn qiicnfaqrl qqlggdiklv
      241 kfngsphvgh yrhypvdykv avtellgkaa alysrniqqf egerigsaga qdeisepvsn
      301 iskialrpnk sfqgtplvqs snfllpslie ynegrdlgsv qdeqkeglih lahppsinlh
      361 gvlgqilfda cvpknvegwd lkssdssrkh pytsrrnshf npikcirrsr l
//
LOCUS       XP_016706677             225 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein At5g42700 [Gossypium hirsutum].
ACCESSION   XP_016706677
VERSION     XP_016706677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851188.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="B3 domain-containing protein At5g42700"
                     /calculated_mol_wt=25653
     Region          127..218
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(131,134,142,145,147,175,184..185,187..188)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..225
                     /gene="LOC107921308"
                     /coded_by="XM_016851188.2:149..826"
                     /db_xref="GeneID:107921308"
ORIGIN      
        1 mvvakekmms yeeirqkrve enkkrmealn lpqlstllht psfkpsprkq mklrtvekql
       61 vvvrrssrva nkpapvyqev lvdkvmiprr vskhrdlsnr vyasdearae alekaekles
      121 gldphfpvfi ksmlqshvtg gfwlglpvhf cktnlpkrde vmtlvdeegh eyptiylakk
      181 tglsggwkgf avahrlvdgd avvfqllqrt tfkvyiirvk gseqs
//
LOCUS       XP_016702016             277 aa            linear   PLN 06-AUG-2024
DEFINITION  BRI1 kinase inhibitor 1 [Gossypium hirsutum].
ACCESSION   XP_016702016
VERSION     XP_016702016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016846527.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..277
                     /product="BRI1 kinase inhibitor 1"
                     /calculated_mol_wt=30842
     CDS             1..277
                     /gene="LOC107917144"
                     /coded_by="XM_016846527.2:332..1165"
                     /db_xref="GeneID:107917144"
ORIGIN      
        1 mdtyqqpdes kvkeeiregs silsspvstp stspshefsf tvslhsssny ktntpssiav
       61 dlspaddlff hghllplhll shlpvsprss tnsldgfnvp pkelvddpkp vkptsksdsn
      121 ishhhhqrht veeakvknks ksfslfslpr rqkgvreked kekhgkknmr ldlsnalkry
      181 mrmirpllff tgkrekklhh htqaysfsgn lslrnkksel rgrkrdyysa pasmrtsptn
      241 sgllvattgs tsdstieelq aaiqsaiahc knsfkgg
//
LOCUS       XP_016708221             275 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIC 22, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708221
VERSION     XP_016708221.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852732.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..275
                     /product="protein TIC 22, chloroplastic isoform X1"
                     /calculated_mol_wt=30197
     Region          14..271
                     /region_name="Tic22"
                     /note="Tic22-like family; pfam04278"
                     /db_xref="CDD:398114"
     CDS             1..275
                     /gene="LOC107922621"
                     /coded_by="XM_016852732.2:104..931"
                     /db_xref="GeneID:107922621"
ORIGIN      
        1 mefpkpppfp snpllslstf ihrlgaelat rlhhtnrlas nfaagfspsa tshhrplfas
       61 vsqpkaavaa aatlnpeqva ktlagtavyt vsnsnnefvl isdpngaksi gllcfrqeda
      121 eaflaqvrlr rrelrsnakv vpitldqvfs lkvegiafrf lpdpiqikna lelksgdiks
      181 gfdgvpvfqs dllvvrkknk rycpiyfnke diekelskvs rasrgpgvsq qimvgsledv
      241 lkkmemsekn sgwedlifip pgksysqhlq dvvkv
//
LOCUS       XP_016708222             250 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIC 22, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708222
VERSION     XP_016708222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852733.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..250
                     /product="protein TIC 22, chloroplastic isoform X2"
                     /calculated_mol_wt=27636
     Region          14..233
                     /region_name="Tic22"
                     /note="Tic22-like family; pfam04278"
                     /db_xref="CDD:398114"
     CDS             1..250
                     /gene="LOC107922621"
                     /coded_by="XM_016852733.2:62..814"
                     /db_xref="GeneID:107922621"
ORIGIN      
        1 mefpkpppfp snpllslstf ihrlgaelat rlhhtnrlas nfaagfspsa tshhrplfas
       61 vsqpkaavaa aatlnpeqva ktlagtavyt vsnsnnefvl isdpngaksi gllcfrqeda
      121 eaflaqvrlr rrelrsnakv vpitldqvfs lkvegiafrf lpdpiqikna lelksgdiks
      181 gfdgvpvfqs dllvvrkknk rycpiyfnke diekelskvs rasrgpgvsq qimysfhpic
      241 wsrleawkmf
//
LOCUS       XP_040943215             273 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943215
VERSION     XP_040943215.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087281.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..273
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=31142
     Region          <63..117
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          151..>215
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     Site            order(155..156,158..159,162..163,167..168,180,184,188,
                     191..192,195..196)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271344"
     CDS             1..273
                     /gene="LOC107921143"
                     /coded_by="XM_041087281.1:322..1143"
                     /db_xref="GeneID:107921143"
ORIGIN      
        1 mifksstrly ifqgpselvp pekdlkvkre akireemldr easlrrarae tslsdgiswg
       61 mgedaieeae vvenykdfaf ldyarvgral alyevgdkee afaemedvsi slkgypgetf
      121 clwqgflfns hfktfstlcw dkvrcwdkke vslsafaflf svlvqynqtq idnivelerr
      181 ledagyavga rvlellccwg lsdhlvlhpl diegvvedsi slswksqgla llqvecylml
      241 hsmvvylsrn lnlvllkqgf vvtlctrffn hdc
//
LOCUS       XP_040943216             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943216
VERSION     XP_040943216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087282.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=30097
     Region          <63..117
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          143..>207
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     Site            order(147..148,150..151,154..155,159..160,172,176,180,
                     183..184,187..188)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271344"
     CDS             1..265
                     /gene="LOC107921143"
                     /coded_by="XM_041087282.1:277..1074"
                     /db_xref="GeneID:107921143"
ORIGIN      
        1 mifksstrly ifqgpselvp pekdlkvkre akireemldr easlrrarae tslsdgiswg
       61 mgedaieeae vvenykdfaf ldyarvgral alyevgdkee afaemedvsi slkgypgetf
      121 clwqgflfns hfktfstlcw dkvslsafaf lfsvlvqynq tqidnivele rrledagyav
      181 garvlellcc wglsdhlvlh pldiegvved sislswksqg lallqvecyl mlhsmvvyls
      241 rnlnlvllkq gfvvtlctrf fnhdc
//
LOCUS       XP_040943217             180 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943217
VERSION     XP_040943217.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087283.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=20654
     Region          151..>179
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..180
                     /gene="LOC107921143"
                     /coded_by="XM_041087283.1:274..816"
                     /db_xref="GeneID:107921143"
ORIGIN      
        1 mifksstrly ifqgpselvp pekdlkvkre akireemldr easlrrarae tslsdgiswg
       61 mgedaieeae vvenykdfaf ldyarvgral alyevgdkee afaemedvsi slkgypgetf
      121 clwqgflfns hfktfstlcw dkvrcwdkke vslsafaflf svlvqynqtq idnivelers
//
LOCUS       XP_040943218             180 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943218
VERSION     XP_040943218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087284.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=20666
     Region          143..>171
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..180
                     /gene="LOC107921143"
                     /coded_by="XM_041087284.1:274..816"
                     /db_xref="GeneID:107921143"
ORIGIN      
        1 mifksstrly ifqgpselvp pekdlkvkre akireemldr easlrrarae tslsdgiswg
       61 mgedaieeae vvenykdfaf ldyarvgral alyevgdkee afaemedvsi slkgypgetf
      121 clwqgflfns hfktfstlcw dkvslsafaf lfsvlvqynq tqidnivele rsekfknrrp
//
LOCUS       XP_040943219             172 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943219
VERSION     XP_040943219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087285.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=19609
     Region          143..>171
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..172
                     /gene="LOC107921143"
                     /coded_by="XM_041087285.1:273..791"
                     /db_xref="GeneID:107921143"
ORIGIN      
        1 mifksstrly ifqgpselvp pekdlkvkre akireemldr easlrrarae tslsdgiswg
       61 mgedaieeae vvenykdfaf ldyarvgral alyevgdkee afaemedvsi slkgypgetf
      121 clwqgflfns hfktfstlcw dkvslsafaf lfsvlvqynq tqidnivele rs
//
LOCUS       XP_016707946             824 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707946
VERSION     XP_016707946.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852457.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707946.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..824
                     /product="protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE
                     LIGHT 1"
                     /calculated_mol_wt=90654
     Region          197..732
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..824
                     /gene="LOC107922426"
                     /coded_by="XM_016852457.2:295..2769"
                     /db_xref="GeneID:107922426"
ORIGIN      
        1 messkpdpna aqvepiidna alassvvidq teidpqsrmm egsrsgriye ssdenlsknn
       61 gvedsendhi apaselsspp idvttvaieg thgvsdgqkp qlavvdgdnd milpsassnn
      121 sadgsikdtl dgqqsqgngs lgsspkvnds evedakkgdh lvqvrnlvlp lkriitssfe
      181 spksgtstpt kegdlnkvhi dtaatfesvk eagskfggiv rwksnrtqtv errklavqdl
      241 eklqedmvvy knrlvdaeea kmqalqelds tnrqinelkl slekaqneen qarqdselam
      301 lraeemeqgi gdeasvaakq qlevakarha aavaelesvn eeletlrkgy asmvterdia
      361 ikeaeeakss skevertveg mtidmmatke slesaqathv gaeekrivaa mardqdthyw
      421 ekelkqaeee lqrlnqqiqs akdmkpkldt asallldlka elaaymesks klenngylsd
      481 asqtqerrth tdipaavasa kkeleevklk iekattevds lkvvavsles elekeksala
      541 smkqresmke keardkmevt kllqqaaqea deaksvvema nqelrklkee aeqakagagt
      601 lesrllavek eieaakaske salvaietlq dtnnvdssds vilsleeyyd lrkrayevee
      661 qasmiaaaav sqieeakqsq srslvkleev nremaerkea leialekaek akegklgveq
      721 elrqwrakhe krrkasgssh ggnpprssfe gkrqsnkvep vtmspsstld tskaiyghnk
      781 esesspetvv vkkkkkslfp kifmffsrkk asfsktkskt kskt
//
LOCUS       XP_040943221             824 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 [Gossypium
            hirsutum].
ACCESSION   XP_040943221
VERSION     XP_040943221.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087287.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..824
                     /product="protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE
                     LIGHT 1"
                     /calculated_mol_wt=90654
     Region          197..732
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..824
                     /gene="LOC107922426"
                     /coded_by="XM_041087287.1:375..2849"
                     /db_xref="GeneID:107922426"
ORIGIN      
        1 messkpdpna aqvepiidna alassvvidq teidpqsrmm egsrsgriye ssdenlsknn
       61 gvedsendhi apaselsspp idvttvaieg thgvsdgqkp qlavvdgdnd milpsassnn
      121 sadgsikdtl dgqqsqgngs lgsspkvnds evedakkgdh lvqvrnlvlp lkriitssfe
      181 spksgtstpt kegdlnkvhi dtaatfesvk eagskfggiv rwksnrtqtv errklavqdl
      241 eklqedmvvy knrlvdaeea kmqalqelds tnrqinelkl slekaqneen qarqdselam
      301 lraeemeqgi gdeasvaakq qlevakarha aavaelesvn eeletlrkgy asmvterdia
      361 ikeaeeakss skevertveg mtidmmatke slesaqathv gaeekrivaa mardqdthyw
      421 ekelkqaeee lqrlnqqiqs akdmkpkldt asallldlka elaaymesks klenngylsd
      481 asqtqerrth tdipaavasa kkeleevklk iekattevds lkvvavsles elekeksala
      541 smkqresmke keardkmevt kllqqaaqea deaksvvema nqelrklkee aeqakagagt
      601 lesrllavek eieaakaske salvaietlq dtnnvdssds vilsleeyyd lrkrayevee
      661 qasmiaaaav sqieeakqsq srslvkleev nremaerkea leialekaek akegklgveq
      721 elrqwrakhe krrkasgssh ggnpprssfe gkrqsnkvep vtmspsstld tskaiyghnk
      781 esesspetvv vkkkkkslfp kifmffsrkk asfsktkskt kskt
//
LOCUS       XP_016707947             696 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g04860 [Gossypium
            hirsutum].
ACCESSION   XP_016707947
VERSION     XP_016707947.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852458.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707947.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..696
                     /product="pentatricopeptide repeat-containing protein
                     At2g04860"
                     /calculated_mol_wt=76579
     Region          69..694
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          92..115
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          119..146
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          152..216
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          387..412
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          416..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..478
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          488..512
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          586..615
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..696
                     /gene="LOC107922427"
                     /coded_by="XM_016852458.2:154..2244"
                     /db_xref="GeneID:107922427"
ORIGIN      
        1 mslgnsfglc ffhsllksql qtktlkssll ifrqllqsnl kpsdltfsll ikasasssfa
       61 snslkskiea nqihthlfks siiqlvyvkt gllnlyvnlg cienarflfe empdrdvvaw
      121 nalisgyskn cydifafnlf iemvregfrp eaatlvglvp scgrlelafq gksihgfgvk
      181 agldkdskvk naltsmyakc gdlegaeilf eemvektvvs wntmigaygq nglfdeamvl
      241 fnkmraqdle ansvtlmsll sanadpetlh cfaikvgfvn nasviaslvc vyakcgdses
      301 aellhkslsq enlvsltaiv ssyaekgnmd kvvpcftrsq mldmeldeva mvsilhgvkn
      361 paniaiglaf hgygiktglf ihclvangli smysrfndid avfslfsemq ekpliswnsi
      421 isscvqagrt gdamelfcqm rmyghvpdai tiatmlsgcs qlgylqfgkk lhgfilrnnl
      481 emedfigtal idmyvkcgti elaerifksi kepclatwnt mitgygiggf enkafnhyte
      541 lqkrglkpdk itflgvlaac ihggnvdkgr ryfqmmveef aispglqhca smvallsrcg
      601 yfgeallfir nmeskpdsav wgallngcci hqevklgeyl akklylldhr ngglyvlmsn
      661 lyaskgmwdd varvrqimkd tggdgcsgts lielts
//
LOCUS       XP_016707948             696 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g04860 [Gossypium
            hirsutum].
ACCESSION   XP_016707948
VERSION     XP_016707948.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852459.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707948.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..696
                     /product="pentatricopeptide repeat-containing protein
                     At2g04860"
                     /calculated_mol_wt=76579
     Region          69..694
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          92..115
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          119..146
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          152..216
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          387..412
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          416..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..478
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          488..512
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          586..615
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..696
                     /gene="LOC107922427"
                     /coded_by="XM_016852459.2:154..2244"
                     /db_xref="GeneID:107922427"
ORIGIN      
        1 mslgnsfglc ffhsllksql qtktlkssll ifrqllqsnl kpsdltfsll ikasasssfa
       61 snslkskiea nqihthlfks siiqlvyvkt gllnlyvnlg cienarflfe empdrdvvaw
      121 nalisgyskn cydifafnlf iemvregfrp eaatlvglvp scgrlelafq gksihgfgvk
      181 agldkdskvk naltsmyakc gdlegaeilf eemvektvvs wntmigaygq nglfdeamvl
      241 fnkmraqdle ansvtlmsll sanadpetlh cfaikvgfvn nasviaslvc vyakcgdses
      301 aellhkslsq enlvsltaiv ssyaekgnmd kvvpcftrsq mldmeldeva mvsilhgvkn
      361 paniaiglaf hgygiktglf ihclvangli smysrfndid avfslfsemq ekpliswnsi
      421 isscvqagrt gdamelfcqm rmyghvpdai tiatmlsgcs qlgylqfgkk lhgfilrnnl
      481 emedfigtal idmyvkcgti elaerifksi kepclatwnt mitgygiggf enkafnhyte
      541 lqkrglkpdk itflgvlaac ihggnvdkgr ryfqmmveef aispglqhca smvallsrcg
      601 yfgeallfir nmeskpdsav wgallngcci hqevklgeyl akklylldhr ngglyvlmsn
      661 lyaskgmwdd varvrqimkd tggdgcsgts lielts
//
LOCUS       XP_016707949             696 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g04860 [Gossypium
            hirsutum].
ACCESSION   XP_016707949
VERSION     XP_016707949.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852460.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707949.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..696
                     /product="pentatricopeptide repeat-containing protein
                     At2g04860"
                     /calculated_mol_wt=76579
     Region          69..694
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          92..115
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          119..146
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          152..216
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          387..412
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          416..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..478
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          488..512
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          586..615
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..696
                     /gene="LOC107922427"
                     /coded_by="XM_016852460.2:154..2244"
                     /db_xref="GeneID:107922427"
ORIGIN      
        1 mslgnsfglc ffhsllksql qtktlkssll ifrqllqsnl kpsdltfsll ikasasssfa
       61 snslkskiea nqihthlfks siiqlvyvkt gllnlyvnlg cienarflfe empdrdvvaw
      121 nalisgyskn cydifafnlf iemvregfrp eaatlvglvp scgrlelafq gksihgfgvk
      181 agldkdskvk naltsmyakc gdlegaeilf eemvektvvs wntmigaygq nglfdeamvl
      241 fnkmraqdle ansvtlmsll sanadpetlh cfaikvgfvn nasviaslvc vyakcgdses
      301 aellhkslsq enlvsltaiv ssyaekgnmd kvvpcftrsq mldmeldeva mvsilhgvkn
      361 paniaiglaf hgygiktglf ihclvangli smysrfndid avfslfsemq ekpliswnsi
      421 isscvqagrt gdamelfcqm rmyghvpdai tiatmlsgcs qlgylqfgkk lhgfilrnnl
      481 emedfigtal idmyvkcgti elaerifksi kepclatwnt mitgygiggf enkafnhyte
      541 lqkrglkpdk itflgvlaac ihggnvdkgr ryfqmmveef aispglqhca smvallsrcg
      601 yfgeallfir nmeskpdsav wgallngcci hqevklgeyl akklylldhr ngglyvlmsn
      661 lyaskgmwdd varvrqimkd tggdgcsgts lielts
//
LOCUS       XP_016707950             696 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g04860 [Gossypium
            hirsutum].
ACCESSION   XP_016707950
VERSION     XP_016707950.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707950.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..696
                     /product="pentatricopeptide repeat-containing protein
                     At2g04860"
                     /calculated_mol_wt=76579
     Region          69..694
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          92..115
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          119..146
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          152..216
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          218..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          387..412
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          416..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..478
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          488..512
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          586..615
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..696
                     /gene="LOC107922427"
                     /coded_by="XM_016852461.2:154..2244"
                     /db_xref="GeneID:107922427"
ORIGIN      
        1 mslgnsfglc ffhsllksql qtktlkssll ifrqllqsnl kpsdltfsll ikasasssfa
       61 snslkskiea nqihthlfks siiqlvyvkt gllnlyvnlg cienarflfe empdrdvvaw
      121 nalisgyskn cydifafnlf iemvregfrp eaatlvglvp scgrlelafq gksihgfgvk
      181 agldkdskvk naltsmyakc gdlegaeilf eemvektvvs wntmigaygq nglfdeamvl
      241 fnkmraqdle ansvtlmsll sanadpetlh cfaikvgfvn nasviaslvc vyakcgdses
      301 aellhkslsq enlvsltaiv ssyaekgnmd kvvpcftrsq mldmeldeva mvsilhgvkn
      361 paniaiglaf hgygiktglf ihclvangli smysrfndid avfslfsemq ekpliswnsi
      421 isscvqagrt gdamelfcqm rmyghvpdai tiatmlsgcs qlgylqfgkk lhgfilrnnl
      481 emedfigtal idmyvkcgti elaerifksi kepclatwnt mitgygiggf enkafnhyte
      541 lqkrglkpdk itflgvlaac ihggnvdkgr ryfqmmveef aispglqhca smvallsrcg
      601 yfgeallfir nmeskpdsav wgallngcci hqevklgeyl akklylldhr ngglyvlmsn
      661 lyaskgmwdd varvrqimkd tggdgcsgts lielts
//
LOCUS       XP_040943222             265 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem I chlorophyll a/b-binding protein 5, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040943222
VERSION     XP_040943222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087288.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="photosystem I chlorophyll a/b-binding protein 5,
                     chloroplastic"
                     /calculated_mol_wt=28863
     Region          1..263
                     /region_name="PLN00147"
                     /note="light-harvesting complex I chlorophyll-a/b binding
                     protein Lhca5; Provisional"
                     /db_xref="CDD:215076"
     CDS             1..265
                     /gene="LOC121203567"
                     /coded_by="XM_041087288.1:179..976"
                     /db_xref="GeneID:121203567"
ORIGIN      
        1 mavavgrgfl vqpcsysssp tfhnklykps lgsattfwst fapqrypqva vqaqqrptwl
       61 pgldpppyld gtlagdygfd plglgedpks lkwyvqaelv harfamagva gilftdllrv
      121 tgisnlpvwy eagavkfefa strtlivvqf llmgfaetkr ymdfinpgsq akegsffgle
      181 aaleglepgy pggpllnplg lakdiknahe wklkeikngr lamiamlgif vqayvthagp
      241 idnlvehlsn pwqktiiqtl ansts
//
LOCUS       XP_016706476             415 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-amylase [Gossypium hirsutum].
ACCESSION   XP_016706476
VERSION     XP_016706476.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850987.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706476.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..415
                     /product="alpha-amylase"
                     /calculated_mol_wt=46248
     Region          16..414
                     /region_name="PLN00196"
                     /note="alpha-amylase; Provisional"
                     /db_xref="CDD:165762"
     CDS             1..415
                     /gene="LOC107921118"
                     /coded_by="XM_016850987.2:214..1461"
                     /db_xref="GeneID:107921118"
ORIGIN      
        1 mltslcfvfi fifvfspfat ptllfqgfnw essnkaggwy nflqssvsdi snagvthvwl
       61 pppsqsaapq gylpgrlydl daskygsqae lkslidafhq kgvkcvadiv inhrtaerqd
      121 nrgiyclfeg gtsddrldwg psfickddta ysdgtgnpdt glpydpapdi dhlnprvqne
      181 lsdwlnwlkt eigfdgwrfd fvrgyaptit kiymdrtspd favgekwedf idgqedlhra
      241 alkdwvqaag gavtafdftt kgvlndavqg klwrlkdssg kppgmigllp qnavtfidnh
      301 dtgstqnrwp fpsdkimqgy ayilthpgip sifydhffdl glkdeisklv eirnrngiqs
      361 tstvtirase selymasidd kiimkigpmm dlgnlvppny qlatsgnnya vwekk
//
LOCUS       XP_016706537             151 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol carrier protein 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706537
VERSION     XP_016706537.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706537.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="sterol carrier protein 2 isoform X1"
                     /calculated_mol_wt=16522
     Region          21..112
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..151
                     /gene="LOC107921172"
                     /coded_by="XM_016851048.2:140..595"
                     /db_xref="GeneID:107921172"
ORIGIN      
        1 mgttelksdn lfemmkihla sdagkeltkn iglvyqinia pkkigfdevs yivdlkkgev
       61 tkgkyeggkp datfsfkddd fikvatgkmn pqiafmrgam kikgslsaaq kftpdifpkp
      121 akmrsemlly ycitsqsnge gpsnkgkepv e
//
LOCUS       XP_016706536             151 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol carrier protein 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706536
VERSION     XP_016706536.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706536.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="sterol carrier protein 2 isoform X1"
                     /calculated_mol_wt=16522
     Region          21..112
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..151
                     /gene="LOC107921172"
                     /coded_by="XM_016851047.2:151..606"
                     /db_xref="GeneID:107921172"
ORIGIN      
        1 mgttelksdn lfemmkihla sdagkeltkn iglvyqinia pkkigfdevs yivdlkkgev
       61 tkgkyeggkp datfsfkddd fikvatgkmn pqiafmrgam kikgslsaaq kftpdifpkp
      121 akmrsemlly ycitsqsnge gpsnkgkepv e
//
LOCUS       XP_040943223             151 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol carrier protein 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943223
VERSION     XP_040943223.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087289.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="sterol carrier protein 2 isoform X1"
                     /calculated_mol_wt=16522
     Region          21..112
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..151
                     /gene="LOC107921172"
                     /coded_by="XM_041087289.1:130..585"
                     /db_xref="GeneID:107921172"
ORIGIN      
        1 mgttelksdn lfemmkihla sdagkeltkn iglvyqinia pkkigfdevs yivdlkkgev
       61 tkgkyeggkp datfsfkddd fikvatgkmn pqiafmrgam kikgslsaaq kftpdifpkp
      121 akmrsemlly ycitsqsnge gpsnkgkepv e
//
LOCUS       XP_040943224             146 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol carrier protein 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943224
VERSION     XP_040943224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087290.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="sterol carrier protein 2 isoform X2"
                     /calculated_mol_wt=16119
     Region          21..112
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..146
                     /gene="LOC107921172"
                     /coded_by="XM_041087290.1:130..570"
                     /db_xref="GeneID:107921172"
ORIGIN      
        1 mgttelksdn lfemmkihla sdagkeltkn iglvyqinia pkkigfdevs yivdlkkgev
       61 tkgkyeggkp datfsfkddd fikvatgkmn pqiafmrgam kikgslsaaq kftpdifpkp
      121 akmrsemlly yskamekvpv tkgrnl
//
LOCUS       XP_040943225             146 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol carrier protein 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943225
VERSION     XP_040943225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087291.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="sterol carrier protein 2 isoform X2"
                     /calculated_mol_wt=16119
     Region          21..112
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..146
                     /gene="LOC107921172"
                     /coded_by="XM_041087291.1:130..570"
                     /db_xref="GeneID:107921172"
ORIGIN      
        1 mgttelksdn lfemmkihla sdagkeltkn iglvyqinia pkkigfdevs yivdlkkgev
       61 tkgkyeggkp datfsfkddd fikvatgkmn pqiafmrgam kikgslsaaq kftpdifpkp
      121 akmrsemlly yskamekvpv tkgrnl
//
LOCUS       XP_040943226             146 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol carrier protein 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943226
VERSION     XP_040943226.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087292.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="sterol carrier protein 2 isoform X2"
                     /calculated_mol_wt=16119
     Region          21..112
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..146
                     /gene="LOC107921172"
                     /coded_by="XM_041087292.1:130..570"
                     /db_xref="GeneID:107921172"
ORIGIN      
        1 mgttelksdn lfemmkihla sdagkeltkn iglvyqinia pkkigfdevs yivdlkkgev
       61 tkgkyeggkp datfsfkddd fikvatgkmn pqiafmrgam kikgslsaaq kftpdifpkp
      121 akmrsemlly yskamekvpv tkgrnl
//
LOCUS       XP_016706785             185 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-regulated protein 27 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706785
VERSION     XP_016706785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851296.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..185
                     /product="cold-regulated protein 27 isoform X1"
                     /calculated_mol_wt=20977
     CDS             1..185
                     /gene="LOC107921448"
                     /coded_by="XM_016851296.2:111..668"
                     /db_xref="GeneID:107921448"
ORIGIN      
        1 megfirtesw tsseangles prfalhqqvp cseslmtest stewtdekhs lylksmeasf
       61 vnqlydswnf lgrssklsrq thgtssdqyk vlrggrwqki nferpgfrln krdrpssfma
      121 spwiqhlrsg sksrvlascs hlqdnvsske vsdqnfvdee qgkksvavet pcndevkfis
      181 igpfd
//
LOCUS       XP_016706786             178 aa            linear   PLN 06-AUG-2024
DEFINITION  cold-regulated protein 27 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706786
VERSION     XP_016706786.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851297.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..178
                     /product="cold-regulated protein 27 isoform X2"
                     /calculated_mol_wt=20198
     CDS             1..178
                     /gene="LOC107921448"
                     /coded_by="XM_016851297.2:111..647"
                     /db_xref="GeneID:107921448"
ORIGIN      
        1 megfirtesw tsseangles prfalhqqvp cseslmtest stewtdekhs lylksmeasf
       61 vnqlydswnf lgrssklsrq thgtssdqyk vlrggrwqki nferpgfrln krdrpssfma
      121 spwiqhlrsg sksrvlascs hlqdnvsske vsdqnfvdee qgkksvavet pcndevil
//
LOCUS       XP_040943227             223 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein ZAT10 [Gossypium hirsutum].
ACCESSION   XP_040943227
VERSION     XP_040943227.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087293.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="zinc finger protein ZAT10"
                     /calculated_mol_wt=23833
     Region          80..104
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          82..102
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          130..154
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          132..152
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..223
                     /gene="LOC121213922"
                     /coded_by="XM_041087293.1:120..791"
                     /db_xref="GeneID:121213922"
ORIGIN      
        1 malealnspt naaapfhfqd tnlhcldaft krkrskrprf dddhvpteee ylalclvmla
       61 rggaprttst tlthqklgty kcsvcnkafn syqalgghka shrklsgand dhstpttssa
      121 vgsnpsgrsh ecsichksfp tgqalgghkr rhyeggaant gsitsegvss tstntthrdf
      181 dlnipalpaf spanlfvsgg deevesphps kkpcllmqka tqn
//
LOCUS       XP_016707477             936 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707477
VERSION     XP_016707477.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851988.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..936
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X1"
                     /calculated_mol_wt=102237
     Region          196..257
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          628..925
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..936
                     /gene="LOC107922134"
                     /coded_by="XM_016851988.2:208..3018"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 mdpsivkffe ededesmhsg adveafqaal nrdiegdast sqppdsdtvl sqgsnrvssq
       61 slaqwptvgq dgnanfqhqq pvqiaqqrss emeqkqqgvl vmgslqqpnd vpqgvnrlpp
      121 qqkqsqddhq qgvaeqvsaq vplmagiqtt errpiprepe rtniqdsesq yaklqkmsnq
      181 qaggteqpnn qvnrgkqvpf avllpsllpq ldkdramqlh tlygklkkne iakdgfvrhm
      241 rdivgdqmlr lavnklqvqm ssnqvplqsq vaarpntprm psvggatqfg gphtlaqlhq
      301 kgpnspanss hpsppavlmq tnssylsien kvqksqemdc qpdshfgllg srnpsssstt
      361 vnqerdrasi pvqginmqqq hlnfaqtsfg mygssnyhty sgsnvsnsgs clkpqphesq
      421 iiqiphhqsm gsnpvggatq tmnmmggpkf erqnstndpn rlqggtishf ssnsvswqas
      481 sskelnpgpl ssmtfvkqes vdqvaeqqhg lylsathgss taiveegnav satpkdefle
      541 kqssrvgfst ptsmappnll spsittqmds nlpnpsvpat agvngkapqk kpcasqkkpl
      601 ealgssppls skkqkvsggf sdqsieqlnd vtavsgvnlr eeeeqlfsgp kdesriseas
      661 rrivqeeeer vilqkiplqk klaeimaksg lknisndver cvslcveerm hgllcnlirl
      721 skqrvdvekp rhqthvisdv qqhimimnrn areewekkqa eaeklrklnd peaettaddd
      781 kekddgrvkv vktnkeeddk mrataanvaa raavggddml skwqlmaeqa rqkrdggtds
      841 lsgcqagkdv ncrplsasgk nttdyqesen rgslsppasg ssrksgrnqg vsthtrvars
      901 isvkdviavl erepqmskst liyrlyektr seaaae
//
LOCUS       XP_016707478             932 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707478
VERSION     XP_016707478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851989.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X2"
                     /calculated_mol_wt=101810
     Region          192..253
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          624..921
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..932
                     /gene="LOC107922134"
                     /coded_by="XM_016851989.2:208..3006"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 mdpsivkffe ededesmhsg adveafqaal nrdiegdast sqppdsdtgs nrvssqslaq
       61 wptvgqdgna nfqhqqpvqi aqqrssemeq kqqgvlvmgs lqqpndvpqg vnrlppqqkq
      121 sqddhqqgva eqvsaqvplm agiqtterrp iprepertni qdsesqyakl qkmsnqqagg
      181 teqpnnqvnr gkqvpfavll psllpqldkd ramqlhtlyg klkkneiakd gfvrhmrdiv
      241 gdqmlrlavn klqvqmssnq vplqsqvaar pntprmpsvg gatqfggpht laqlhqkgpn
      301 spansshpsp pavlmqtnss ylsienkvqk sqemdcqpds hfgllgsrnp ssssttvnqe
      361 rdrasipvqg inmqqqhlnf aqtsfgmygs snyhtysgsn vsnsgsclkp qphesqiiqi
      421 phhqsmgsnp vggatqtmnm mggpkferqn stndpnrlqg gtishfssns vswqassske
      481 lnpgplssmt fvkqesvdqv aeqqhglyls athgsstaiv eegnavsatp kdeflekqss
      541 rvgfstptsm appnllspsi ttqmdsnlpn psvpatagvn gkapqkkpca sqkkplealg
      601 sspplsskkq kvsggfsdqs ieqlndvtav sgvnlreeee qlfsgpkdes riseasrriv
      661 qeeeervilq kiplqkklae imaksglkni sndvercvsl cveermhgll cnlirlskqr
      721 vdvekprhqt hvisdvqqhi mimnrnaree wekkqaeaek lrklndpeae ttadddkekd
      781 dgrvkvvktn keeddkmrat aanvaaraav ggddmlskwq lmaeqarqkr dggtdslsgc
      841 qagkdvncrp lsasgknttd yqesenrgsl sppasgssrk sgrnqgvsth trvarsisvk
      901 dviavlerep qmskstliyr lyektrseaa ae
//
LOCUS       XP_016707479             906 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016707479
VERSION     XP_016707479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851990.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..906
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X3"
                     /calculated_mol_wt=99062
     Region          196..257
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          628..866
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..906
                     /gene="LOC107922134"
                     /coded_by="XM_016851990.2:208..2928"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 mdpsivkffe ededesmhsg adveafqaal nrdiegdast sqppdsdtvl sqgsnrvssq
       61 slaqwptvgq dgnanfqhqq pvqiaqqrss emeqkqqgvl vmgslqqpnd vpqgvnrlpp
      121 qqkqsqddhq qgvaeqvsaq vplmagiqtt errpiprepe rtniqdsesq yaklqkmsnq
      181 qaggteqpnn qvnrgkqvpf avllpsllpq ldkdramqlh tlygklkkne iakdgfvrhm
      241 rdivgdqmlr lavnklqvqm ssnqvplqsq vaarpntprm psvggatqfg gphtlaqlhq
      301 kgpnspanss hpsppavlmq tnssylsien kvqksqemdc qpdshfgllg srnpsssstt
      361 vnqerdrasi pvqginmqqq hlnfaqtsfg mygssnyhty sgsnvsnsgs clkpqphesq
      421 iiqiphhqsm gsnpvggatq tmnmmggpkf erqnstndpn rlqggtishf ssnsvswqas
      481 sskelnpgpl ssmtfvkqes vdqvaeqqhg lylsathgss taiveegnav satpkdefle
      541 kqssrvgfst ptsmappnll spsittqmds nlpnpsvpat agvngkapqk kpcasqkkpl
      601 ealgssppls skkqkvsggf sdqsieqlnd vtavsgvnlr eeeeqlfsgp kdesriseas
      661 rrivqeeeer vilqkiplqk klaeimaksg lknisndver cvslcveerm hgllcnlirl
      721 skqrvdvekp rhqthvisdv qqhimimnrn areewekkqa eaeklrklnd peaettaddd
      781 kekddgrvkv vktnkeeddk mrataanvaa raavggddml skwqlmaeqa rqkrdggtds
      841 lsgcqagkdv ncrplsasgk nttdyqesen rgslsppasd lcssnankpq kkpfqfnqgm
      901 shynly
//
LOCUS       XP_016707480             899 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_016707480
VERSION     XP_016707480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851991.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..899
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X4"
                     /calculated_mol_wt=98125
     Region          196..257
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          628..866
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..899
                     /gene="LOC107922134"
                     /coded_by="XM_016851991.2:208..2907"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 mdpsivkffe ededesmhsg adveafqaal nrdiegdast sqppdsdtvl sqgsnrvssq
       61 slaqwptvgq dgnanfqhqq pvqiaqqrss emeqkqqgvl vmgslqqpnd vpqgvnrlpp
      121 qqkqsqddhq qgvaeqvsaq vplmagiqtt errpiprepe rtniqdsesq yaklqkmsnq
      181 qaggteqpnn qvnrgkqvpf avllpsllpq ldkdramqlh tlygklkkne iakdgfvrhm
      241 rdivgdqmlr lavnklqvqm ssnqvplqsq vaarpntprm psvggatqfg gphtlaqlhq
      301 kgpnspanss hpsppavlmq tnssylsien kvqksqemdc qpdshfgllg srnpsssstt
      361 vnqerdrasi pvqginmqqq hlnfaqtsfg mygssnyhty sgsnvsnsgs clkpqphesq
      421 iiqiphhqsm gsnpvggatq tmnmmggpkf erqnstndpn rlqggtishf ssnsvswqas
      481 sskelnpgpl ssmtfvkqes vdqvaeqqhg lylsathgss taiveegnav satpkdefle
      541 kqssrvgfst ptsmappnll spsittqmds nlpnpsvpat agvngkapqk kpcasqkkpl
      601 ealgssppls skkqkvsggf sdqsieqlnd vtavsgvnlr eeeeqlfsgp kdesriseas
      661 rrivqeeeer vilqkiplqk klaeimaksg lknisndver cvslcveerm hgllcnlirl
      721 skqrvdvekp rhqthvisdv qqhimimnrn areewekkqa eaeklrklnd peaettaddd
      781 kekddgrvkv vktnkeeddk mrataanvaa raavggddml skwqlmaeqa rqkrdggtds
      841 lsgcqagkdv ncrplsasgk nttdyqesen rgslsppasg edgfccvlsi cfvsfnrvk
//
LOCUS       XP_016707481             845 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_016707481
VERSION     XP_016707481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851992.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..845
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X5"
                     /calculated_mol_wt=92347
     Region          105..166
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          537..834
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..845
                     /gene="LOC107922134"
                     /coded_by="XM_016851992.2:299..2836"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 meqkqqgvlv mgslqqpndv pqgvnrlppq qkqsqddhqq gvaeqvsaqv plmagiqtte
       61 rrpipreper tniqdsesqy aklqkmsnqq aggteqpnnq vnrgkqvpfa vllpsllpql
      121 dkdramqlht lygklkknei akdgfvrhmr divgdqmlrl avnklqvqms snqvplqsqv
      181 aarpntprmp svggatqfgg phtlaqlhqk gpnspanssh psppavlmqt nssylsienk
      241 vqksqemdcq pdshfgllgs rnpssssttv nqerdrasip vqginmqqqh lnfaqtsfgm
      301 ygssnyhtys gsnvsnsgsc lkpqphesqi iqiphhqsmg snpvggatqt mnmmggpkfe
      361 rqnstndpnr lqggtishfs snsvswqass skelnpgpls smtfvkqesv dqvaeqqhgl
      421 ylsathgsst aiveegnavs atpkdeflek qssrvgfstp tsmappnlls psittqmdsn
      481 lpnpsvpata gvngkapqkk pcasqkkple algsspplss kkqkvsggfs dqsieqlndv
      541 tavsgvnlre eeeqlfsgpk desriseasr rivqeeeerv ilqkiplqkk laeimaksgl
      601 knisndverc vslcveermh gllcnlirls kqrvdvekpr hqthvisdvq qhimimnrna
      661 reewekkqae aeklrklndp eaettadddk ekddgrvkvv ktnkeeddkm rataanvaar
      721 aavggddmls kwqlmaeqar qkrdggtdsl sgcqagkdvn crplsasgkn ttdyqesenr
      781 gslsppasgs srksgrnqgv sthtrvarsi svkdviavle repqmskstl iyrlyektrs
      841 eaaae
//
LOCUS       XP_016707482             845 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_016707482
VERSION     XP_016707482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851993.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..845
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X5"
                     /calculated_mol_wt=92347
     Region          105..166
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          537..834
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..845
                     /gene="LOC107922134"
                     /coded_by="XM_016851993.2:242..2779"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 meqkqqgvlv mgslqqpndv pqgvnrlppq qkqsqddhqq gvaeqvsaqv plmagiqtte
       61 rrpipreper tniqdsesqy aklqkmsnqq aggteqpnnq vnrgkqvpfa vllpsllpql
      121 dkdramqlht lygklkknei akdgfvrhmr divgdqmlrl avnklqvqms snqvplqsqv
      181 aarpntprmp svggatqfgg phtlaqlhqk gpnspanssh psppavlmqt nssylsienk
      241 vqksqemdcq pdshfgllgs rnpssssttv nqerdrasip vqginmqqqh lnfaqtsfgm
      301 ygssnyhtys gsnvsnsgsc lkpqphesqi iqiphhqsmg snpvggatqt mnmmggpkfe
      361 rqnstndpnr lqggtishfs snsvswqass skelnpgpls smtfvkqesv dqvaeqqhgl
      421 ylsathgsst aiveegnavs atpkdeflek qssrvgfstp tsmappnlls psittqmdsn
      481 lpnpsvpata gvngkapqkk pcasqkkple algsspplss kkqkvsggfs dqsieqlndv
      541 tavsgvnlre eeeqlfsgpk desriseasr rivqeeeerv ilqkiplqkk laeimaksgl
      601 knisndverc vslcveermh gllcnlirls kqrvdvekpr hqthvisdvq qhimimnrna
      661 reewekkqae aeklrklndp eaettadddk ekddgrvkvv ktnkeeddkm rataanvaar
      721 aavggddmls kwqlmaeqar qkrdggtdsl sgcqagkdvn crplsasgkn ttdyqesenr
      781 gslsppasgs srksgrnqgv sthtrvarsi svkdviavle repqmskstl iyrlyektrs
      841 eaaae
//
LOCUS       XP_016707483             845 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 4b isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_016707483
VERSION     XP_016707483.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851994.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..845
                     /product="transcription initiation factor TFIID subunit 4b
                     isoform X5"
                     /calculated_mol_wt=92347
     Region          105..166
                     /region_name="RST"
                     /note="RCD1-SRO-TAF4 (RST) plant domain; pfam12174"
                     /db_xref="CDD:432383"
     Region          537..834
                     /region_name="TAF4"
                     /note="Transcription initiation factor TFIID component
                     TAF4 family; pfam05236"
                     /db_xref="CDD:461598"
     CDS             1..845
                     /gene="LOC107922134"
                     /coded_by="XM_016851994.2:219..2756"
                     /db_xref="GeneID:107922134"
ORIGIN      
        1 meqkqqgvlv mgslqqpndv pqgvnrlppq qkqsqddhqq gvaeqvsaqv plmagiqtte
       61 rrpipreper tniqdsesqy aklqkmsnqq aggteqpnnq vnrgkqvpfa vllpsllpql
      121 dkdramqlht lygklkknei akdgfvrhmr divgdqmlrl avnklqvqms snqvplqsqv
      181 aarpntprmp svggatqfgg phtlaqlhqk gpnspanssh psppavlmqt nssylsienk
      241 vqksqemdcq pdshfgllgs rnpssssttv nqerdrasip vqginmqqqh lnfaqtsfgm
      301 ygssnyhtys gsnvsnsgsc lkpqphesqi iqiphhqsmg snpvggatqt mnmmggpkfe
      361 rqnstndpnr lqggtishfs snsvswqass skelnpgpls smtfvkqesv dqvaeqqhgl
      421 ylsathgsst aiveegnavs atpkdeflek qssrvgfstp tsmappnlls psittqmdsn
      481 lpnpsvpata gvngkapqkk pcasqkkple algsspplss kkqkvsggfs dqsieqlndv
      541 tavsgvnlre eeeqlfsgpk desriseasr rivqeeeerv ilqkiplqkk laeimaksgl
      601 knisndverc vslcveermh gllcnlirls kqrvdvekpr hqthvisdvq qhimimnrna
      661 reewekkqae aeklrklndp eaettadddk ekddgrvkvv ktnkeeddkm rataanvaar
      721 aavggddmls kwqlmaeqar qkrdggtdsl sgcqagkdvn crplsasgkn ttdyqesenr
      781 gslsppasgs srksgrnqgv sthtrvarsi svkdviavle repqmskstl iyrlyektrs
      841 eaaae
//
LOCUS       XP_016707485             442 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707485
VERSION     XP_016707485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851996.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..442
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48652
     Region          161..402
                     /region_name="DUF620"
                     /note="Protein of unknown function (DUF620); pfam04788"
                     /db_xref="CDD:398452"
     CDS             1..442
                     /gene="LOC107922136"
                     /coded_by="XM_016851996.2:229..1557"
                     /db_xref="GeneID:107922136"
ORIGIN      
        1 merkqesrsr akspartasp msnllrrrrk nyshhpepff frsgglrpae alsplkegpd
       61 pdgtdaensr megrwaqwmk gqlarggpsv ststckrsdl rlllgvlgap lapvhvsald
      121 sfshltikdt piesssaqyi lqqytaasgg qklqnsihna yamgrvrmia sefqtankvt
      181 knrnstkvae sggfvlwqmn pdmwyvelal gaskvhagcn gklvwrhtpw lgahatrgpv
      241 rplrralqgl dprttasmft narcsgekqi ngedcfilkl cadpatlkar segpaeivrh
      301 vlfgyfsqkt gllvhledsh ltriqnnggd avywettids sledyrlveg imiahsgrsv
      361 vtlfrfgdta ishtrtrmee awaieevafn vpglsaecfi ppdeirlasm deacefsqgp
      421 tlktslatap yrpkvgkldk ss
//
LOCUS       XP_016707768             635 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ASPARTIC PROTEASE IN GUARD CELL 1 [Gossypium hirsutum].
ACCESSION   XP_016707768
VERSION     XP_016707768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..635
                     /product="protein ASPARTIC PROTEASE IN GUARD CELL 1"
                     /calculated_mol_wt=70617
     Region          84..426
                     /region_name="pepsin_A_like_plant"
                     /note="Chroloplast Nucleoids DNA-binding Protease and
                     Nucellin, pepsin-like aspartic proteases from plants;
                     cd05476"
                     /db_xref="CDD:133143"
     Site            order(103..106,299..302)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133143"
     Site            order(103,299)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133143"
     Site            order(155..158,162..165)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133143"
     CDS             1..635
                     /gene="LOC107922303"
                     /coded_by="XM_016852279.2:77..1984"
                     /db_xref="GeneID:107922303"
ORIGIN      
        1 martwlhlts siivcalicf nfftvdakdh hprpmllplq ltsrnhsqqr hldnirrhlq
       61 qsglssstpn armrlyddll sngyyttrlw igtppqefal ivdtgstvty vpcsscahcg
      121 khqdprfqpd lsstyqpvkc npscncddeq kqctydrrya emssssgvlg edivsfgnes
      181 elvpqravfg cenretgdly sqradgimgl grgqlsivdq lvdksvigds fslcyggmdv
      241 gggamvlgki tpppemvfsh sdpfrspyyn ielkemhvag krlklptgvf dgrhgtvlds
      301 gttyayfqkd afvafrdail revhslkrvr gpdpnyddic fsgagrdvsq lsksfpevem
      361 vfnngnklll spenylfrht kligayclgi fanaesttll ggivvrntlv tydrdndrig
      421 flktncselw rrvkisgapa papsvsqsnd tnleippasa psgspanvlp gsfhigfitf
      481 dmsistndsk lklnfkelgq liskelevdn sqvrllnvts kgndylvrwg ifptssasyi
      541 ssstalsiil rlrdhrlqfp erfgnyklve wnaepqrkss wwrhhllavv lgciitlsls
      601 aigiwlvirh rqqsvtayep vasptpeqel qplqt
//
LOCUS       XP_016706468            1012 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Gossypium hirsutum].
ACCESSION   XP_016706468
VERSION     XP_016706468.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850979.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706468.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1012
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At3g47570"
                     /calculated_mol_wt=110431
     Region          1..1000
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          78..101
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          102..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          126..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..173
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          174..197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          198..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          271..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          295..318
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          319..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..398
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          399..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..519
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          520..543
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          544..567
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          568..591
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          592..615
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1012
                     /gene="LOC107921107"
                     /coded_by="XM_016850979.2:61..3099"
                     /db_xref="GeneID:107921107"
ORIGIN      
        1 mpssssqqla fllfilyvkc lfvsiesnts lvtdkealls fksqiktsgf pnplsqwdpn
       61 sspcnwtgvv cnkhntrvve lnlsgfhleg sisphvgnls flhslqlqdn qlsgelpdqm
      121 wnlfrlrdln msqnslygvi psniskltel rsldlmtnki tgavpedldq lvqlqvlnlg
      181 rnlftgtipv sianisslqt lnlgtnnltg aiptelshlr nlkeldltin hltgtvpssm
      241 ynmsslvvla lasnhlwgrl pydvgvtlpn llvfnfcfne ftggipgslh nltnikiirm
      301 ahnllqgtvp pglgnlpfle mynigfnkiv ttgddslefi itsltnssrl kflaldgnll
      361 egeipesign lsevlsklym ggnhisgnip psiaqlsglt llnlsynsis geippemgkl
      421 velqmlglag nqisgripts lgdlrklnqi dlsgnqlvgq ipssfqnfqk llsadlsnnr
      481 lngsipkeil nipslstvln fsrnslngpl peeigllesv vaidlsmnhl sgnipssieg
      541 cksleklfma knmlsgpipg tigelkglet ldlssnqlsg siptnlqklq vleslnlsfn
      601 dlegslpsgg ifknlssvhl egnrklcfpl ackntrgrhe rlvkiyvsia vittfalcfi
      661 maslfhikkg kpkatrtseq lkeqhqmisy heirratgnf npgnligkgs fgsvykgyln
      721 gvhiaikvld vartgswksf raecealrnv rhrnlvklis scssvdiknv eflalvyefl
      781 tngsvqdwlk gnkrnadgeg lnvmerlnva idvasaldyl hhdcevpvvh cdlkpsnill
      841 dqdmtakvgd fglarllmek sssqpsisst nvlkgsigyi ppeygfgekp stagdvysyg
      901 vmllelftgk spthesfage lnlikwtqsa fpskvqqild pelllllqnl qydsqpinpe
      961 tqhdylttii gvglsctsvs pdgritmrda lrklktvkst ltnpsppakn ra
//
LOCUS       XP_040943228             172 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943228
VERSION     XP_040943228.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087294.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X1"
                     /calculated_mol_wt=19260
     Region          31..>130
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..172
                     /gene="LOC107921189"
                     /coded_by="XM_041087294.1:495..1013"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 migvstssef cegstkatcv miwiaqiigk pnlapaawvk rlvtlcdqap ttplddvqlv
       61 lekefgrsid eifenfdvnp lslasiahvh rarlrgdknd vvvkvqhpgi qdlmmtgihn
      121 lqafalyiqk ndikfdlfsv akvmgkhvfv ftlmflakhi ypsfmyfpdy vn
//
LOCUS       XP_040943229             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943229
VERSION     XP_040943229.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087295.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X2"
                     /calculated_mol_wt=18201
     Region          31..>130
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..164
                     /gene="LOC107921189"
                     /coded_by="XM_041087295.1:502..996"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 migvstssef cegstkatcv miwiaqiigk pnlapaawvk rlvtlcdqap ttplddvqlv
       61 lekefgrsid eifenfdvnp lslasiahvh rarlrgdknd vvvkvqhpgi qdlmmtgihn
      121 lqafalyiqk ndikfdlfsv akvypraiqg hvekmfenal hfvv
//
LOCUS       XP_040943230             161 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943230
VERSION     XP_040943230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087296.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..161
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X3"
                     /calculated_mol_wt=18156
     Region          31..>119
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..161
                     /gene="LOC107921189"
                     /coded_by="XM_041087296.1:493..978"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 migvstssef cegstkatcv miwiaqiigk pnlapaawvk rlvtlcdqap ttplddvqlv
       61 lekefgrsid eifenfdvhr arlrgdkndv vvkvqhpgiq dlmmtgihnl qafalyiqkn
      121 dikfdlfsva kvmgkhvfvf tlmflakhiy psfmyfpdyv n
//
LOCUS       XP_016706557             160 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016706557
VERSION     XP_016706557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X4"
                     /calculated_mol_wt=18103
     Region          4..>118
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..160
                     /gene="LOC107921189"
                     /coded_by="XM_016851068.2:418..900"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 mcydmggffl kiaqiigkpn lapaawvkrl vtlcdqaptt plddvqlvle kefgrsidei
       61 fenfdvnpls lasiahvhra rlrgdkndvv vkvqhpgiqd lmmtgihnlq afalyiqknd
      121 ikfdlfsvak vmgkhvfvft lmflakhiyp sfmyfpdyvn
//
LOCUS       XP_016706556             160 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016706556
VERSION     XP_016706556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851067.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X4"
                     /calculated_mol_wt=18103
     Region          4..>118
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..160
                     /gene="LOC107921189"
                     /coded_by="XM_016851067.2:455..937"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 mcydmggffl kiaqiigkpn lapaawvkrl vtlcdqaptt plddvqlvle kefgrsidei
       61 fenfdvnpls lasiahvhra rlrgdkndvv vkvqhpgiqd lmmtgihnlq afalyiqknd
      121 ikfdlfsvak vmgkhvfvft lmflakhiyp sfmyfpdyvn
//
LOCUS       XP_040943231             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943231
VERSION     XP_040943231.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087297.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..152
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X5"
                     /calculated_mol_wt=17240
     Region          11..>110
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..152
                     /gene="LOC107921189"
                     /coded_by="XM_041087297.1:434..892"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 miwiaqiigk pnlapaawvk rlvtlcdqap ttplddvqlv lekefgrsid eifenfdvnp
       61 lslasiahvh rarlrgdknd vvvkvqhpgi qdlmmtgihn lqafalyiqk ndikfdlfsv
      121 akvmgkhvfv ftlmflakhi ypsfmyfpdy vn
//
LOCUS       XP_040943232             149 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized aarF domain-containing protein kinase At5g05200,
            chloroplastic isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943232
VERSION     XP_040943232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087298.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..149
                     /product="uncharacterized aarF domain-containing protein
                     kinase At5g05200, chloroplastic isoform X6"
                     /calculated_mol_wt=17000
     Region          4..>107
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     CDS             1..149
                     /gene="LOC107921189"
                     /coded_by="XM_041087298.1:416..865"
                     /db_xref="GeneID:107921189"
ORIGIN      
        1 mcydmggffl kiaqiigkpn lapaawvkrl vtlcdqaptt plddvqlvle kefgrsidei
       61 fenfdvhrar lrgdkndvvv kvqhpgiqdl mmtgihnlqa falyiqkndi kfdlfsvakv
      121 mgkhvfvftl mflakhiyps fmyfpdyvn
//
LOCUS       XP_016708118             157 aa            linear   PLN 06-AUG-2024
DEFINITION  MFP1 attachment factor 1 [Gossypium hirsutum].
ACCESSION   XP_016708118
VERSION     XP_016708118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852629.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="MFP1 attachment factor 1"
                     /calculated_mol_wt=16477
     Region          41..127
                     /region_name="WPP"
                     /note="WPP domain; pfam13943"
                     /db_xref="CDD:433596"
     CDS             1..157
                     /gene="LOC107922546"
                     /coded_by="XM_016852629.2:130..603"
                     /db_xref="GeneID:107922546"
ORIGIN      
        1 maetesttta qdsataetep hqtqaqsqid etaaklnnlt lriwpptqrt rdavinrlve
       61 tlssqsvlsk rygtipedea sslaksiege afsvagaafs pdddgieilq myskeiskrm
      121 ldtvksraat gaaadapsat eaangeevss ssvkaea
//
LOCUS       XP_016706634             330 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-D3-3 [Gossypium hirsutum].
ACCESSION   XP_016706634
VERSION     XP_016706634.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851145.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706634.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..330
                     /product="cyclin-D3-3"
                     /calculated_mol_wt=37701
     Region          75..173
                     /region_name="CYCLIN_AtCycD-like_rpt1"
                     /note="first cyclin box found in plant cyclin-delta
                     family; cd20543"
                     /db_xref="CDD:410246"
     Region          178..270
                     /region_name="CYCLIN_AtCycD-like_rpt2"
                     /note="second cyclin box found in plant cyclin-delta
                     family; cd20544"
                     /db_xref="CDD:410247"
     CDS             1..330
                     /gene="LOC107921272"
                     /coded_by="XM_016851145.2:207..1199"
                     /db_xref="GeneID:107921272"
ORIGIN      
        1 mafnspfvid slycsedtge dhfveescfn ksnsfpille qdllweddel ssllskeeqs
       61 qmynclqtng klavarfnav dwmlkvtahh sfsaltavla vnyldrflfs lpfqtdkpwm
      121 tqlgavacls laakveetqv pllldlqvee skyyfeakti qrmeilvlst lqwkmnpitp
      181 isflhyiarr lglkghvcwe flrrcdqill svisdsrflc ylpsamatai mlqvmdsvel
      241 epnlrvqfqn qlldnlgink dkvdesckli ieltktreeg nqskkrrfkw ipespngvid
      301 llfisnesnd swgvsspdpv skkiktqllh
//
LOCUS       XP_016707632             534 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g47056 [Gossypium hirsutum].
ACCESSION   XP_016707632
VERSION     XP_016707632.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707632.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..534
                     /product="F-box protein At1g47056"
                     /calculated_mol_wt=57414
     Region          53..91
                     /region_name="F-box_AtTIR1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     transport inhibitor response 1 protein (TIR1),
                     coronatine-insensitive protein 1 (COI1) and similar
                     proteins; cd22159"
                     /db_xref="CDD:438930"
     Site            order(57,60,63..64,67..68,70..72,74..75,77..81,83..84)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438930"
     Region          104..>257
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          145..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          171..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          196..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          249..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          280..>441
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          299..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          325..352
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          353..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          378..403
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          404..428
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..534
                     /gene="LOC107922226"
                     /coded_by="XM_016852143.2:402..2006"
                     /db_xref="GeneID:107922226"
ORIGIN      
        1 mgqsvsaakl rnrrdwnhrq rskpkstali cpmqaeetee lersntdgss dfisdlpdec
       61 lacifqslsp ddrkrcslvc rrwlliegqs rhrlslnaqs dlqplipsif srfdavtkla
      121 lkcdrrsvsi gdeslvlise rcrnlirlkl racrdltdag mlafaknckg lkklscgsca
      181 fgakgmnavl dnclaleels vkrlrgitdg aaaepigpgv aaaalkticl kelyngqcfg
      241 pliigsknlk slklfrcsgd wdklfplive rvagmveihm eriqvsdvgl aaisncsnle
      301 ilhlvktpec tnaglgavae kcnllrklhi dgwkanrigd qgliavaksc pnlqelvlig
      361 vnptklslem lasncpnler lalcgsdtvg daeisfiavk cialkklcik ncpvsdhgme
      421 alasgcpnlv kvkvkkcrgv tsegadwlra trgslvvnld inldmgehld asasdggaqd
      481 ngiefppmvg sqigassias sstgrstsfk llglmsgrsf vactlrrlas ssrs
//
LOCUS       XP_016707404             512 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine proteinase RD21A [Gossypium hirsutum].
ACCESSION   XP_016707404
VERSION     XP_016707404.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707404.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="cysteine proteinase RD21A"
                     /calculated_mol_wt=57049
     Region          106..162
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     smart00848"
                     /db_xref="CDD:214853"
     Region          192..408
                     /region_name="Peptidase_C1"
                     /note="Papain family cysteine protease; pfam00112"
                     /db_xref="CDD:425470"
     Site            order(210,216,352,372)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(259..260,326,350,353,403)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     Region          432..488
                     /region_name="GRAN"
                     /note="Granulin; smart00277"
                     /db_xref="CDD:197621"
     CDS             1..512
                     /gene="LOC107922081"
                     /coded_by="XM_016851915.2:168..1706"
                     /db_xref="GeneID:107922081"
ORIGIN      
        1 mllrctfinl ffqvshwvtt ihllfsfisl lslafllpht fkilflfsff ffsdkmgsqg
       61 svmamlllmm ftlssasdms iisydethpd kstsswrtdd evmamyeewl vkhgktyngl
      121 gekerrfqif kdnlrfideh nadesqsfnv glnrfadltn eeyraiylgi kkpnrkvska
      181 sdrysallge klpdsvdwre kgavaevkdq gscgscwafs tiaaveginq ivtgellsls
      241 eqelvdcdts ynegcngglm dyafefiikn ggidteedyp ytahdgtcdp yrknakvvsi
      301 ndyedvpvnd ekalkkavan qpvsvaieag grsfqlyqsg ifdgkcgtql dhgvtavgyg
      361 tekgkdywiv knswgsswge agylrmarnv antvtgkcgi ameasypikt genppnpgps
      421 ppspikpptv cdsyyscpes ntccciyeyy nycfawgccp leaatccedr ysccphdypv
      481 cnihegtclm skgnplavka lkrtpakpfw ah
//
LOCUS       XP_016706247             441 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g06744 [Gossypium hirsutum].
ACCESSION   XP_016706247
VERSION     XP_016706247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850758.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..441
                     /product="uncharacterized protein At4g06744"
                     /calculated_mol_wt=49230
     Region          93..>370
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          177..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          224..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          294..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          342..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..441
                     /gene="LOC107920923"
                     /coded_by="XM_016850758.2:195..1520"
                     /db_xref="GeneID:107920923"
ORIGIN      
        1 mvpkllfstf tllitcffgf giaqpcprpr pcpsispppr ptrtvsyvrp rpplydpslr
       61 llprqpnnnp gplanraril aitqelkrni tfdpqnytpt wvgnnyclfk gficdtvpdl
      121 nitglagidf ngarfggnln fyrfiqnlpd iaifhansnn fsgvinqglg glryfyeidl
      181 snnkfiggfp snvlsaknlt fvdlrfnnyl gtiprslfnf dtdvlfinnn vfgqgiprnl
      241 gntpalyltl annnfngtip rsigaawetm tevlllgnkl sgclpfeigy lnrttvfdvg
      301 snrltgpipe sfgcmaklql lnmahnrfyg avpevlcrlp nafnftlsnn yftqvgpqcr
      361 rliklrrlnv nrncimglpf qrsatdcanf fskprscare stfsiipcrl paaslrtrtv
      421 fqedevapsp ktynalekpp h
//
LOCUS       XP_016706797             424 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g06744 [Gossypium hirsutum].
ACCESSION   XP_016706797
VERSION     XP_016706797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="uncharacterized protein At4g06744"
                     /calculated_mol_wt=46984
     Region          84..>349
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..424
                     /gene="LOC107921460"
                     /coded_by="XM_016851308.2:284..1558"
                     /db_xref="GeneID:107921460"
ORIGIN      
        1 msiiisfmll vcliscttar dssrealqvt igigngnlsk gcndkhhnlp fklncklptt
       61 planevlkfa dqrlalvhpi iqkfkslits dplgitqtwv gsdicsykgf ycdnppdnks
      121 aitvasidfn gfqlsapsld gfldqlpdia lfhansnnfs gslspniakl rylyeldisn
      181 nrfsgpfpda vlnmpgltfl dirfnfftgs vpsqiftqnl dalfinnnef mihlpdnivn
      241 thifyltlan nkfngplprt ifkafsslae vlllndqltg cipyeigllk eavvfdagnn
      301 qltghlpfsl acmenleqln fagnllfgav pevvcelgkl mnlslsenyf ihvgpmcril
      361 iergvldvrn ncipdlpfqr sveecanffa hprfcprmws ynyipcyhfp ssssipemap
      421 spss
//
LOCUS       XP_040943233              96 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG_HOMOLOG [Gossypium hirsutum].
ACCESSION   XP_040943233
VERSION     XP_040943233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087299.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..96
                     /product="transcriptional corepressor LEUNIG_HOMOLOG"
                     /calculated_mol_wt=10353
     CDS             1..96
                     /gene="LOC107922387"
                     /coded_by="XM_041087299.1:250..540"
                     /db_xref="GeneID:107922387"
ORIGIN      
        1 manrkirvpt hstnhvylif qnkrnnttsl slnrsesvgs rksrkckcsi atnsdikgdv
       61 nlggpqramh vdpssiygqg imqskpgign tdlnai
//
LOCUS       XP_016706347              98 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706347
VERSION     XP_016706347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="pentatricopeptide repeat-containing protein
                     At4g14190, chloroplastic"
                     /calculated_mol_wt=10973
     CDS             1..98
                     /gene="LOC107921006"
                     /coded_by="XM_016850858.2:351..647"
                     /db_xref="GeneID:107921006"
ORIGIN      
        1 mprrspdgcs skshtmllve tyhqhrrlma liekpenegs cpmqilgddg dwtkndfwat
       61 vkflkhafrs neilqvassa salvsscffn lmvenkda
//
LOCUS       XP_016708042             649 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At5g67200 [Gossypium hirsutum].
ACCESSION   XP_016708042
VERSION     XP_016708042.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852553.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708042.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..649
                     /product="probable inactive receptor kinase At5g67200"
                     /calculated_mol_wt=71674
     Region          39..77
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <106..589
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          107..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          178..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          377..631
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(377..380,383,385,397,399,431,447..450,499,503..504,
                     506,516..517)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..649
                     /gene="LOC107922487"
                     /coded_by="XM_016852553.2:447..2396"
                     /db_xref="GeneID:107922487"
ORIGIN      
        1 msmlnrrqqq ppllqtfsif fllscsllvy peasklhlas peakallgfq skadltnhlg
       61 fsqnatlhfc ewkgvtcyqq tvvrliiedl hlggffapdt lshldqlrvl slqnnslsgp
      121 ipdlsslinl kalfldhnff tgsfpssils fhrirtldls ynnltgsipt slasldrlyy
      181 lrldwnrfng tippfnqssl etfnisgnnl tgaipvtptl lrfgfssfsw npglcgeiih
      241 kechprpplf appptvtlvq saqvhgmela epsskkhrrt aviigfstgf fvlvgsllcf
      301 vmavrkqkde kqstaviecd daaaaaaiqm eqeneleekv krvqgmqvgk sgslafcage
      361 aqlytldqlm rasaellgrg tmgstykavl dnrlivtvkr ldyvklagtt neeafeqhme
      421 svgglrhpnl vplrayfqar eerlliydyq pngslfslih gskstrakpl hwtsclkiae
      481 dvaqglayih qawrlvhgnl kssnvllgpd feacltdysl aalitpthde dpdsmackpp
      541 etrhsthqat sksdvyafgv lllelltgkp pskhpvvapn emmhwlrscr egdggegerl
      601 gmllevaiac csscseqrpt mwqvlkmlqe ikeavlkedg gldplsgms
//
LOCUS       XP_016707510            1033 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-4A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707510
VERSION     XP_016707510.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852021.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707510.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1033
                     /product="kinesin-like protein KIN-4A isoform X1"
                     /calculated_mol_wt=116247
     Region          10..367
                     /region_name="KISc_KIF4"
                     /note="Kinesin motor domain, KIF4-like subfamily; cd01372"
                     /db_xref="CDD:276823"
     Site            order(19,89,92,94..97,267)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276823"
     Site            order(319,322,325)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276823"
     Region          379..>561
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          <483..>766
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1033
                     /gene="LOC107922148"
                     /coded_by="XM_016852021.2:693..3794"
                     /db_xref="GeneID:107922148"
ORIGIN      
        1 mevgggseec cvkvavhvrp ligdekvqgc kdcvtvipgk pqvqigthsf tfdhvygsts
       61 spswmfeeci vplvdglflg ynatvlaygq tgsgktytmg tgfkdgsqtg iipqvmnalf
      121 skienlkhqi efqlhvsfie ilkeevrdll dptflnksdt asantgkvnv pgkppiqire
      181 ssdgvitlag stevsvstlk emgacleqgs lsratgstnm nnqssrshai ftitleqmrk
      241 lnpvsgdgnp ndsmseeylc aklhlvdlag serakrtgsd gmrfkegvhi nkgllalgnv
      301 isalgdekkr kegvhvpyrd skltrllqds lggnsrtvmi acispadina eetlntlkya
      361 nrarniqnkp vvnrdpmste ilkmrqqley lqaelcargg sgevqvlker iawleaaned
      421 lcrelyeyhs rctiveqrem daqdgspcsv esdglkrnlh nresrdyqiv etmiggdsre
      481 idegaakewe hmllqntmdk elhelnrqle ekesemkvfg ghtvalkqhf gkkiqeleee
      541 kravqqerdq llaeienlsa gsegqalkvh dihaqklksl eaqimdlkkk qenqvqllkk
      601 kqksdeaakr lqdeiqyika qkvqlqhrik qeaeqfrqwk asrekellql rkegrrneyk
      661 rhklqalnqr qklvlqrkte eaamatkrlk ellearksaa rdnlaiangn gtngqinekg
      721 lqrwldhele vmvnvhevrf eyekqsqvra alaeelavlk qvdeldskgp spsrgkngca
      781 rgsslspnar varifslehm lgissnslva masqlseaee reraftnrgr wnqlrsmgda
      841 knllqymfns lgdsrchlwe kdieiremke qlkelvgllr qselqrkeve nelklreqav
      901 aialatsatg nspislkhia ddvkgssspm svpaqkqlky spgivngpar esaafigqtr
      961 kmiplgqlpm kklvangqag ngklwrwkrs hhqwlvqfkw kwqkpwrlse wirhsdetii
     1021 rarprsqvlt hrv
//
LOCUS       XP_016707509            1033 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-4A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707509
VERSION     XP_016707509.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852020.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707509.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1033
                     /product="kinesin-like protein KIN-4A isoform X1"
                     /calculated_mol_wt=116247
     Region          10..367
                     /region_name="KISc_KIF4"
                     /note="Kinesin motor domain, KIF4-like subfamily; cd01372"
                     /db_xref="CDD:276823"
     Site            order(19,89,92,94..97,267)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276823"
     Site            order(319,322,325)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276823"
     Region          379..>561
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          <483..>766
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1033
                     /gene="LOC107922148"
                     /coded_by="XM_016852020.2:693..3794"
                     /db_xref="GeneID:107922148"
ORIGIN      
        1 mevgggseec cvkvavhvrp ligdekvqgc kdcvtvipgk pqvqigthsf tfdhvygsts
       61 spswmfeeci vplvdglflg ynatvlaygq tgsgktytmg tgfkdgsqtg iipqvmnalf
      121 skienlkhqi efqlhvsfie ilkeevrdll dptflnksdt asantgkvnv pgkppiqire
      181 ssdgvitlag stevsvstlk emgacleqgs lsratgstnm nnqssrshai ftitleqmrk
      241 lnpvsgdgnp ndsmseeylc aklhlvdlag serakrtgsd gmrfkegvhi nkgllalgnv
      301 isalgdekkr kegvhvpyrd skltrllqds lggnsrtvmi acispadina eetlntlkya
      361 nrarniqnkp vvnrdpmste ilkmrqqley lqaelcargg sgevqvlker iawleaaned
      421 lcrelyeyhs rctiveqrem daqdgspcsv esdglkrnlh nresrdyqiv etmiggdsre
      481 idegaakewe hmllqntmdk elhelnrqle ekesemkvfg ghtvalkqhf gkkiqeleee
      541 kravqqerdq llaeienlsa gsegqalkvh dihaqklksl eaqimdlkkk qenqvqllkk
      601 kqksdeaakr lqdeiqyika qkvqlqhrik qeaeqfrqwk asrekellql rkegrrneyk
      661 rhklqalnqr qklvlqrkte eaamatkrlk ellearksaa rdnlaiangn gtngqinekg
      721 lqrwldhele vmvnvhevrf eyekqsqvra alaeelavlk qvdeldskgp spsrgkngca
      781 rgsslspnar varifslehm lgissnslva masqlseaee reraftnrgr wnqlrsmgda
      841 knllqymfns lgdsrchlwe kdieiremke qlkelvgllr qselqrkeve nelklreqav
      901 aialatsatg nspislkhia ddvkgssspm svpaqkqlky spgivngpar esaafigqtr
      961 kmiplgqlpm kklvangqag ngklwrwkrs hhqwlvqfkw kwqkpwrlse wirhsdetii
     1021 rarprsqvlt hrv
//
LOCUS       XP_016707511             950 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-4A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707511
VERSION     XP_016707511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852022.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..950
                     /product="kinesin-like protein KIN-4A isoform X2"
                     /calculated_mol_wt=107463
     Region          <8..284
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Region          296..>478
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          <400..>683
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..950
                     /gene="LOC107922148"
                     /coded_by="XM_016852022.2:116..2968"
                     /db_xref="GeneID:107922148"
ORIGIN      
        1 mllfllmtgs gktytmgtgf kdgsqtgiip qvmnalfski enlkhqiefq lhvsfieilk
       61 eevrdlldpt flnksdtasa ntgkvnvpgk ppiqiressd gvitlagste vsvstlkemg
      121 acleqgslsr atgstnmnnq ssrshaifti tleqmrklnp vsgdgnpnds mseeylcakl
      181 hlvdlagser akrtgsdgmr fkegvhinkg llalgnvisa lgdekkrkeg vhvpyrdskl
      241 trllqdslgg nsrtvmiaci spadinaeet lntlkyanra rniqnkpvvn rdpmsteilk
      301 mrqqleylqa elcarggsge vqvlkeriaw leaanedlcr elyeyhsrct iveqremdaq
      361 dgspcsvesd glkrnlhnre srdyqivetm iggdsreide gaakewehml lqntmdkelh
      421 elnrqleeke semkvfgght valkqhfgkk iqeleeekra vqqerdqlla eienlsagse
      481 gqalkvhdih aqklksleaq imdlkkkqen qvqllkkkqk sdeaakrlqd eiqyikaqkv
      541 qlqhrikqea eqfrqwkasr ekellqlrke grrneykrhk lqalnqrqkl vlqrkteeaa
      601 matkrlkell earksaardn laiangngtn gqinekglqr wldhelevmv nvhevrfeye
      661 kqsqvraala eelavlkqvd eldskgpsps rgkngcargs slspnarvar ifslehmlgi
      721 ssnslvamas qlseaeerer aftnrgrwnq lrsmgdaknl lqymfnslgd srchlwekdi
      781 eiremkeqlk elvgllrqse lqrkevenel klreqavaia latsatgnsp islkhiaddv
      841 kgssspmsvp aqkqlkyspg ivngparesa afigqtrkmi plgqlpmkkl vangqagngk
      901 lwrwkrshhq wlvqfkwkwq kpwrlsewir hsdetiirar prsqvlthrv
//
LOCUS       XP_016707200             105 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor RAP2-1 [Gossypium
            hirsutum].
ACCESSION   XP_016707200
VERSION     XP_016707200.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851711.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="ethylene-responsive transcription factor RAP2-1"
                     /calculated_mol_wt=11591
     Region          <13..35
                     /region_name="AP2"
                     /note="DNA-binding domain found in transcription
                     regulators in plants such as APETALA2 and EREBP (ethylene
                     responsive element binding protein). In EREBPs the domain
                     specifically binds to the 11bp GCC box of the ethylene
                     response element (ERE), a promotor...; cl00033"
                     /db_xref="CDD:444663"
     CDS             1..105
                     /gene="LOC107921889"
                     /coded_by="XM_016851711.2:495..812"
                     /db_xref="GeneID:107921889"
ORIGIN      
        1 mrprpefksl piaaahaydt avfylrgpsa rlnfpdlilq eddelrdisp asirkkatev
       61 gakvdalhtt slhhhhasns sessnpprvf skpdlnkype tsded
//
LOCUS       XP_016706758             217 aa            linear   PLN 06-AUG-2024
DEFINITION  WUSCHEL-related homeobox 4 [Gossypium hirsutum].
ACCESSION   XP_016706758
VERSION     XP_016706758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851269.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..217
                     /product="WUSCHEL-related homeobox 4"
                     /calculated_mol_wt=24824
     Region          83..142
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..217
                     /gene="LOC107921414"
                     /coded_by="XM_016851269.2:33..686"
                     /db_xref="GeneID:107921414"
ORIGIN      
        1 mgnmkmhqla cgfweqqpll slgckrlrpl apklhsssty ttvssfdlks firpdsgprk
       61 lgngpsednn rhsppvethp ggtrwnptqe qigilemlyr ggmrtpnaqq ieqiteqlgk
      121 ygkiegknvf ywfqnhkare rqkqkrsslg lthcprssap itpitldtrv etmereedsp
      181 ckrkcrswsf eeedsrsssk edenrtlelf plhpesr
//
LOCUS       XP_016707503             649 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707503
VERSION     XP_016707503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852014.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..649
                     /product="polyadenylate-binding protein 2"
                     /calculated_mol_wt=70956
     Region          32..623
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..649
                     /gene="LOC107922144"
                     /coded_by="XM_016852014.2:374..2323"
                     /db_xref="GeneID:107922144"
ORIGIN      
        1 maqiqvqhqa avsgpngvap gaaggaqfml tslyvgdldv tvtdeqlyql fsqvapvasv
       61 rvcrdlasgr slgygyvnyn nlrdaaramd llnftplnnk pirvmysqrd pslrktgtan
      121 ifiknldksi dhkalhdtfs sfgnilscki stdsfgqskg ygfvqfdnee saqnaidkln
      181 gmlindkqvy vghflrkqer etalnkakfn nvyvknlsks ttdedlktif geygeitsav
      241 vmrdadgksk cfgfvnfena ddaakaveal ngkkfddkew yvgkaqkkse rehelkaqfe
      301 qtmkeaadks qganlyiknl ddsigdetlk elfsefgnit sckvmrdpng iskgsgfvaf
      361 stpeeasral aemngkmvvs kplyvavaqr keerrarlqa qfsqmrpiip svaprmpmyg
      421 apglgqqfly gqappamlpp qasfgyqqql lpgmrpggpp vpnffvpmvq qgqqgqrpgg
      481 rrgagavqqt qqpmpmmqqq mmprgrayry ppgrnmpevp lsnvgggmls vpydmggmsl
      541 rdaaigqpmp ipalatalan atpeqqrtml geslyplver lerdaaakvt gmllemdqte
      601 vlhllespea lkakvaeame vlrsvaaqqq annqadqlas lslndnlvs
//
LOCUS       XP_016671432             194 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S5 [Gossypium hirsutum].
ACCESSION   XP_016671432
VERSION     XP_016671432.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016815943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016671432.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..194
                     /product="40S ribosomal protein S5"
                     /calculated_mol_wt=21425
     Region          24..193
                     /region_name="uS7_Eukaryote"
                     /note="Eukaryota homolog of Ribosomal Protein S7; cd14867"
                     /db_xref="CDD:271246"
     Site            order(24,54..56,58..61,94,98)
                     /site_type="other"
                     /note="S9 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     Site            order(58,60,64..67,70,78,81,83..87,91..95,98,138..140,142,
                     152,159,166,169,175..176)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:271246"
     Site            order(102,105..106,109,175,177..178)
                     /site_type="other"
                     /note="S25 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     CDS             1..194
                     /gene="LOC107891218"
                     /coded_by="XM_016815943.2:102..686"
                     /db_xref="GeneID:107891218"
ORIGIN      
        1 mataiaapan aslqdptksh pdvklfnrws feevqvsdis lsdyigvqps khatyvshtt
       61 grysvkrfrk vqcpiverlt nslmmhgrnn gkklmavriv khameiiyll tdqnpiqviv
      121 daiinsgpre datrigsvgv vrrqavdisp lrrvnqviyl lttsacesaf rniktiaecl
      181 vdelinaakg spnr
//
LOCUS       XP_040943234             211 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S5 [Gossypium hirsutum].
ACCESSION   XP_040943234
VERSION     XP_040943234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087300.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="40S ribosomal protein S5"
                     /calculated_mol_wt=23402
     Region          24..211
                     /region_name="uS7_Eukaryote"
                     /note="Eukaryota homolog of Ribosomal Protein S7; cd14867"
                     /db_xref="CDD:271246"
     Site            order(24,54..56,58..61,94,98)
                     /site_type="other"
                     /note="S9 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     Site            order(58,60,64..67,70,78,81,83..87,91..95,98,138..140,142,
                     152,159,166,169,175..176)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:271246"
     Site            order(102,105..106,109,175,177..178)
                     /site_type="other"
                     /note="S25 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     Site            order(137,140,142,211)
                     /site_type="other"
                     /note="S11 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     CDS             1..211
                     /gene="LOC121213924"
                     /coded_by="XM_041087300.1:16..651"
                     /db_xref="GeneID:121213924"
ORIGIN      
        1 mvtaiaapan aslqdptksh pdvklfnrws feevqvsdis lsdyigvqps khatyvshtt
       61 grysvkrfrk vqcpiverlt nslmmhgrnn gkklmavriv khameiiyll tdqnpiqviv
      121 daiinsgpre datrigsvgv vrrqavdisp lrrvnqviyl lttsacesaf rniktiaecl
      181 vdelinaakg ssnsyaikkk eeiervakan r
//
LOCUS       XP_016707140             254 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH95 [Gossypium hirsutum].
ACCESSION   XP_016707140
VERSION     XP_016707140.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851651.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="transcription factor bHLH95"
                     /calculated_mol_wt=28243
     Region          42..95
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(42..43,46..47,49..50,54,72..73)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(52..53,56,59..60,63,73..74,77..78,81,84,87..88,91,
                     94..95)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     Region          178..234
                     /region_name="ACT"
                     /note="ACT domain; pfam01842"
                     /db_xref="CDD:426468"
     CDS             1..254
                     /gene="LOC107921806"
                     /coded_by="XM_016851651.2:243..1007"
                     /db_xref="GeneID:107921806"
ORIGIN      
        1 mepetvavae vgqkrsrkgg lkqgkanggg dhggdqsehe mhiwtererr kkmrnmfssl
       61 hallpqlpak adkstivdea vtyiknlqqt lqtlekqkle klrnsakvdy dqssiitsqv
      121 qppesreaff tdnqgptnny pvtidmsqtf paqasqacfq twfssnvvis mcgddaqinv
      181 csprkpgtfa tilyilekhq levvsahiss dqyrtmymih vhaggaseqf pellsieetf
      241 klaagemnlc lfsc
//
LOCUS       XP_016676702             151 aa            linear   PLN 06-AUG-2024
DEFINITION  kirola [Gossypium hirsutum].
ACCESSION   XP_016676702
VERSION     XP_016676702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016821213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016676702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="kirola"
                     /calculated_mol_wt=17189
     Site            order(7,11,24..25,28,32,39,58,60..61,66,69,71,83,85,87,
                     91..92,99,101,103,105,114,116,118,120,132..133,135..136,
                     139..140,142..144)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Region          11..150
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(47..48,50..56)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..151
                     /gene="LOC107896066"
                     /coded_by="XM_016821213.2:66..521"
                     /db_xref="GeneID:107896066"
ORIGIN      
        1 maqirkmdcq vvikssadef ynafrskpqf lpkmsnglik dvkllqgdwn svgavrlwsy
       61 asegkpqmvk eifekvdeks ktmvyklveg dllnsynswr niititpvge rsmvkwtmef
      121 ekqnedipdp vgyadslial tknidaylln v
//
LOCUS       XP_040943236             561 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESMERALDA 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943236
VERSION     XP_040943236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087302.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..561
                     /product="protein ESMERALDA 1 isoform X1"
                     /calculated_mol_wt=64017
     Region          153..490
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(161..164,327,329,407..409,451,470..472)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..561
                     /gene="LOC121213925"
                     /coded_by="XM_041087302.1:303..1988"
                     /db_xref="GeneID:121213925"
ORIGIN      
        1 mhaknrvpns gqstpsppas plrspryrpg rksgrcspfq pgrtiahrfs clllsvllrr
       61 qriflfapli yisgmllymg tasvdiipvv khrpspgsvy rspqvyeklk iymnadnssa
      121 dailtvwkns ykggqwrpcv nksyedlpes ngyiyveang glnqqrtsic navavagyln
      181 atllipnfhf hsiwrdpskf kdiydeeyfi stlkndvrvv dkipeyimer fdhnltnvyn
      241 frikawssir yyrdvvlpkl leekvirisp fanrlsfdap pavqrlrcla nyealrfssp
      301 ilslgetlva rmkersansg gkylsvhlrf eedmvafscc vfdggeleke dmkkarergw
      361 kgkftkpgrv irpgairing kcpltplevg lmlrgmgfdn ntyiflasgk iynsektmap
      421 llemfpnlqt kemlaseeel vpykrfssrm aaidytvclh sevfvttqgg nfphflmghr
      481 rylysghskt irpdkrrlal lfdnpnigwr tfkrqmlnmr shsdtkgfel krpndsiytf
      541 pcpdcmcrtn kseaarsssa t
//
LOCUS       XP_040943237             550 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESMERALDA 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943237
VERSION     XP_040943237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087303.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..550
                     /product="protein ESMERALDA 1 isoform X2"
                     /calculated_mol_wt=62849
     Region          153..490
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(161..164,327,329,407..409,451,470..472)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..550
                     /gene="LOC121213925"
                     /coded_by="XM_041087303.1:303..1955"
                     /db_xref="GeneID:121213925"
ORIGIN      
        1 mhaknrvpns gqstpsppas plrspryrpg rksgrcspfq pgrtiahrfs clllsvllrr
       61 qriflfapli yisgmllymg tasvdiipvv khrpspgsvy rspqvyeklk iymnadnssa
      121 dailtvwkns ykggqwrpcv nksyedlpes ngyiyveang glnqqrtsic navavagyln
      181 atllipnfhf hsiwrdpskf kdiydeeyfi stlkndvrvv dkipeyimer fdhnltnvyn
      241 frikawssir yyrdvvlpkl leekvirisp fanrlsfdap pavqrlrcla nyealrfssp
      301 ilslgetlva rmkersansg gkylsvhlrf eedmvafscc vfdggeleke dmkkarergw
      361 kgkftkpgrv irpgairing kcpltplevg lmlrgmgfdn ntyiflasgk iynsektmap
      421 llemfpnlqt kemlaseeel vpykrfssrm aaidytvclh sevfvttqgg nfphflmghr
      481 rylysghskt irpdkrrwrt fkrqmlnmrs hsdtkgfelk rpndsiytfp cpdcmcrtnk
      541 seaarsssat
//
LOCUS       XP_040943238             539 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESMERALDA 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943238
VERSION     XP_040943238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087304.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..539
                     /product="protein ESMERALDA 1 isoform X3"
                     /calculated_mol_wt=61630
     Region          153..468
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     CDS             1..539
                     /gene="LOC121213925"
                     /coded_by="XM_041087304.1:303..1922"
                     /db_xref="GeneID:121213925"
ORIGIN      
        1 mhaknrvpns gqstpsppas plrspryrpg rksgrcspfq pgrtiahrfs clllsvllrr
       61 qriflfapli yisgmllymg tasvdiipvv khrpspgsvy rspqvyeklk iymnadnssa
      121 dailtvwkns ykggqwrpcv nksyedlpes ngyiyveang glnqqrtsic navavagyln
      181 atllipnfhf hsiwrdpskf kdiydeeyfi stlkndvrvv dkipeyimer fdhnltnvyn
      241 frikawssir yyrdvvlpkl leekvirisp fanrlsfdap pavqrlrcla nyealrfssp
      301 ilslgetlva rmkersansg gkylsvhlrf eedmvafscc vfdggeleke dmkkarergw
      361 kgkftkpgrv irpgairing kcpltpleiy nsektmapll emfpnlqtke mlaseeelvp
      421 ykrfssrmaa idytvclhse vfvttqggnf phflmghrry lysghsktir pdkrrlallf
      481 dnpnigwrtf krqmlnmrsh sdtkgfelkr pndsiytfpc pdcmcrtnks eaarsssat
//
LOCUS       XP_040943239             286 aa            linear   PLN 06-AUG-2024
DEFINITION  phytanoyl-CoA dioxygenase [Gossypium hirsutum].
ACCESSION   XP_040943239
VERSION     XP_040943239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087305.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..286
                     /product="phytanoyl-CoA dioxygenase"
                     /calculated_mol_wt=32081
     Region          15..252
                     /region_name="PhyH"
                     /note="Phytanoyl-CoA dioxygenase (PhyH); pfam05721"
                     /db_xref="CDD:399029"
     CDS             1..286
                     /gene="LOC121213926"
                     /coded_by="XM_041087305.1:147..1007"
                     /db_xref="GeneID:121213926"
ORIGIN      
        1 mgivgnltpq qrqsfdsqgf lviesfaspa eieamrkrmd gmlqafdptt tasifstknq
       61 vkltseyfye saekisfffe ekafddngnl kqpkelsink vghalheidp vfkefscsek
      121 vssllfslgy kkpviiqsmy ifkqpgigge vtphqdnsfl ytepktctgl wlaledatvv
      181 ngclwaipes qknglvrrfi rgddgvyfdr pspsydqkdf vpievkagsl vvihgdlihq
      241 sfenqssnsr hayslhavdt dgckwaednw irrkvepkpl yasgqt
//
LOCUS       XP_040943240             292 aa            linear   PLN 06-AUG-2024
DEFINITION  WUSCHEL-related homeobox 6 [Gossypium hirsutum].
ACCESSION   XP_040943240
VERSION     XP_040943240.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087306.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..292
                     /product="WUSCHEL-related homeobox 6"
                     /calculated_mol_wt=33178
     Region          65..124
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..292
                     /gene="LOC121213927"
                     /coded_by="XM_041087306.1:149..1027"
                     /db_xref="GeneID:121213927"
ORIGIN      
        1 mgyphitdln lshsfniakp spldpnptnt tnllalnhgd lasnanegsp ttelnsqqqq
       61 plgssrwnpt peqlltleel yrrgtrtpsa aqiqqiatrl rrfgkiegkn vfywfqnhka
      121 rerqkrrrql kteeqqqqqc dteslekkes vfslpigccq ikptnegsps nvskfseefi
      181 wthgfakseg newmeieeke lrmelcctpi dltnttitas ldtqknlcsf kphqekittl
      241 edenredqtl elfplgsndg nginisnkdt qvpiraistt pnqyfeflpl kn
//
LOCUS       XP_040943241             247 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943241
VERSION     XP_040943241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087307.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..247
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27278
     CDS             1..247
                     /gene="LOC121213928"
                     /coded_by="XM_041087307.1:282..1025"
                     /db_xref="GeneID:121213928"
ORIGIN      
        1 mcpqtafrps kaldgvngvq vvprspfale einqqrefqs thdksfftan qpllmqvwqq
       61 rpsclrpvrc cmkgdqnfqe tvanvltslp fivlgiqapr knlnsklyan sligvgvast
      121 lyhssrgklr mylrwadytm iatatvclsr alrnenpkll maasalllpv qplmvsavht
      181 gmmevafakr alkypelrma hnvhkmssll ggvlfiaddv fprtpfihaa whlaaavgvg
      241 tcnklle
//
LOCUS       XP_040943242             247 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943242
VERSION     XP_040943242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087308.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..247
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27278
     CDS             1..247
                     /gene="LOC121213928"
                     /coded_by="XM_041087308.1:268..1011"
                     /db_xref="GeneID:121213928"
ORIGIN      
        1 mcpqtafrps kaldgvngvq vvprspfale einqqrefqs thdksfftan qpllmqvwqq
       61 rpsclrpvrc cmkgdqnfqe tvanvltslp fivlgiqapr knlnsklyan sligvgvast
      121 lyhssrgklr mylrwadytm iatatvclsr alrnenpkll maasalllpv qplmvsavht
      181 gmmevafakr alkypelrma hnvhkmssll ggvlfiaddv fprtpfihaa whlaaavgvg
      241 tcnklle
//
LOCUS       XP_040943243             306 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein arginine N-methyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_040943243
VERSION     XP_040943243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087309.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="probable protein arginine N-methyltransferase 1"
                     /calculated_mol_wt=34780
     Region          1..>161
                     /region_name="COG4076"
                     /note="Predicted RNA methylase [General function
                     prediction only]"
                     /db_xref="CDD:443253"
     CDS             1..306
                     /gene="LOC121213929"
                     /coded_by="XM_041087309.1:24..944"
                     /db_xref="GeneID:121213929"
ORIGIN      
        1 mlkdvvrtkt yqnviyrnkf lfqnkvvldv gagtgilslf cakvgaahvy avecshmadm
       61 akqivetngl pdvvtvlkgk ieeielpvak vdiiisewmg yfllfenmln tvlyardkwl
      121 vddrvvlpde aslyltaied aeykddkief wnnvygfdms cikkqammep lvdtvdqkqi
      181 vtnchllktm diskmvpgda sfttpfklit vrddyihafv ayfdvsftkc hklmgfstgp
      241 rsrathwkqt vlyledvlti cegetiigsm tvapnkknpr dvdimvkysl sgrrcvvsrv
      301 qfykmr
//
LOCUS       XP_016707283             660 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sulfate transporter 3.3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707283
VERSION     XP_016707283.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851794.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..660
                     /product="probable sulfate transporter 3.3 isoform X1"
                     /calculated_mol_wt=71955
     Region          72..643
                     /region_name="sulP"
                     /note="high affinity sulphate transporter 1; TIGR00815"
                     /db_xref="CDD:273284"
     CDS             1..660
                     /gene="LOC107921989"
                     /coded_by="XM_016851794.2:71..2053"
                     /db_xref="GeneID:107921989"
ORIGIN      
        1 meysnssnte qpqtcleitm evhrvvppph kstihklktt lketffpddp lrqfkgqptg
       61 kkwilaaqyi fpilqwgphy slglfksdiv agltiaslai pqgisyakla nlppivglsc
      121 lfhtgldssf vpplvyavlg ssrdlavgpv siaslilgsm lrqevspvsd pvlflqlaft
      181 ttffaglfqa slgflrlgfi idflskatli gfmagaaiiv slqqlksllg ithfttkmgl
      241 vpvlssvfhn teewswqtil mgfcflvfll varhvsmkrp klfwvsagap lvsvilstll
      301 vfafkaqhhg isiigklqeg lnppswnmlq frgshlglsi ktglvtgiis ltegiavgrt
      361 faalknykvd gnkemmaigl mnmvgsstsc yittgafsrs avnhnagaks avsnivmsit
      421 vmvtllflmp lfqytpnvvl gaiivsavvg lidipaacqi wkidkfdfiv mlcaffgvif
      481 isvqdglama vgmsifkill qitrpktvml gnipgtdifr dlhhykesmk ipgflilsie
      541 apinfansty lnerilrwie eyeaedhkkq sslqfvvlvm savsaidtsg vsifkelkkt
      601 vekkgaelvl vnplgevmek lqksdeagdf mrpdclfltv geavatltat iksqvsnhvv
//
LOCUS       XP_016707284             652 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sulfate transporter 3.3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707284
VERSION     XP_016707284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851795.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..652
                     /product="probable sulfate transporter 3.3 isoform X2"
                     /calculated_mol_wt=71144
     Region          72..635
                     /region_name="sulP"
                     /note="high affinity sulphate transporter 1; TIGR00815"
                     /db_xref="CDD:273284"
     CDS             1..652
                     /gene="LOC107921989"
                     /coded_by="XM_016851795.2:89..2047"
                     /db_xref="GeneID:107921989"
ORIGIN      
        1 meysnssnte qpqtcleitm evhrvvppph kstihklktt lketffpddp lrqfkgqptg
       61 kkwilaaqyi fpilqwgphy slglfksdiv agltiaslai pqgisyakla nlppivglys
      121 sfvpplvyav lgssrdlavg pvsiaslilg smlrqevspv sdpvlflqla ftttffaglf
      181 qaslgflrlg fiidflskat ligfmagaai ivslqqlksl lgithfttkm glvpvlssvf
      241 hnteewswqt ilmgfcflvf llvarhvsmk rpklfwvsag aplvsvilst llvfafkaqh
      301 hgisiigklq eglnppswnm lqfrgshlgl siktglvtgi isltegiavg rtfaalknyk
      361 vdgnkemmai glmnmvgsst scyittgafs rsavnhnaga ksavsnivms itvmvtllfl
      421 mplfqytpnv vlgaiivsav vglidipaac qiwkidkfdf ivmlcaffgv ifisvqdgla
      481 mavgmsifki llqitrpktv mlgnipgtdi frdlhhykes mkipgflils ieapinfans
      541 tylnerilrw ieeyeaedhk kqsslqfvvl vmsavsaidt sgvsifkelk ktvekkgael
      601 vlvnplgevm eklqksdeag dfmrpdclfl tvgeavatlt atiksqvsnh vv
//
LOCUS       XP_016707285             498 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase 17 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707285
VERSION     XP_016707285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851796.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="mitogen-activated protein kinase 17 isoform X1"
                     /calculated_mol_wt=56814
     Region          15..352
                     /region_name="STKc_TDY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TDY Mitogen-Activated Protein Kinases; cd07859"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,62,76,97..100,103,105..106,
                     142,144,146..147,149,159..160,163,178,180..183,185,224)
                     /site_type="active"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,76,97..100,103,106,144,
                     146..147,149,159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143364"
     Site            order(62,105,142,144,163,178,180..183,185,224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143364"
     Site            order(73,101..102,107,118,121,128,150..154,310,312,315)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143364"
     Site            159..185
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143364"
     CDS             1..498
                     /gene="LOC107921990"
                     /coded_by="XM_016851796.2:269..1765"
                     /db_xref="GeneID:107921990"
ORIGIN      
        1 mfdkdfftey geasqyeitd vvgrgsygvv asaidthtge kvaikkmtni fehtpdairi
       61 lreikllrll rhpdivqikh imlppcsref kdifvvfelm esdlhhviki nddltpdhhq
      121 fflyqllrgl kyihtahvfh rdlkpknila nadcklklcd fglarvsftd vpsaifwtdy
      181 vatrwyrape lcgsffsnyt pavdiwsvgc ifaelltgkp lfpgknvvdq lelvtdllgt
      241 psvetiarir nekarkylns mrkkkpipfs qkfptidpla lnllerliaf dpndrpsaee
      301 alahpyfhgl anldnepsmk piskfefefe rrklaeddvr eliyreiley hpqmlqehlq
      361 gkdqisfmyp sgvdrfrrqf acleeygtnd sgillqrkyt slprericnd dtdhidqskk
      421 rtvssatrat yqsptklqgs gdfgyanqnv sgtqetsgkp tsstarcllk snsisasrcv
      481 gviqkpcevh nevqkaia
//
LOCUS       XP_040943245             492 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase 17 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943245
VERSION     XP_040943245.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087311.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..492
                     /product="mitogen-activated protein kinase 17 isoform X2"
                     /calculated_mol_wt=56152
     Region          15..352
                     /region_name="STKc_TDY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TDY Mitogen-Activated Protein Kinases; cd07859"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,62,76,97..100,103,105..106,
                     142,144,146..147,149,159..160,163,178,180..183,185,224)
                     /site_type="active"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,76,97..100,103,106,144,
                     146..147,149,159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143364"
     Site            order(62,105,142,144,163,178,180..183,185,224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143364"
     Site            order(73,101..102,107,118,121,128,150..154,310,312,315)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143364"
     Site            159..185
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143364"
     CDS             1..492
                     /gene="LOC107921990"
                     /coded_by="XM_041087311.1:269..1747"
                     /db_xref="GeneID:107921990"
ORIGIN      
        1 mfdkdfftey geasqyeitd vvgrgsygvv asaidthtge kvaikkmtni fehtpdairi
       61 lreikllrll rhpdivqikh imlppcsref kdifvvfelm esdlhhviki nddltpdhhq
      121 fflyqllrgl kyihtahvfh rdlkpknila nadcklklcd fglarvsftd vpsaifwtdy
      181 vatrwyrape lcgsffsnyt pavdiwsvgc ifaelltgkp lfpgknvvdq lelvtdllgt
      241 psvetiarir nekarkylns mrkkkpipfs qkfptidpla lnllerliaf dpndrpsaee
      301 alahpyfhgl anldnepsmk piskfefefe rrklaeddvr eliyreiley hpqmlqehlq
      361 gkdqisfmyp rrqfacleey gtndsgillq rkytslprer icnddtdhid qskkrtvssa
      421 tratyqsptk lqgsgdfgya nqnvsgtqet sgkptsstar cllksnsisa srcvgviqkp
      481 cevhnevqka ia
//
LOCUS       XP_016706623             233 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HOX3 [Gossypium hirsutum].
ACCESSION   XP_016706623
VERSION     XP_016706623.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851134.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="homeobox-leucine zipper protein HOX3"
                     /calculated_mol_wt=25627
     Region          68..124
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(69..73,75,92,98,111,113..114,117..118,120..122,
                     124..125)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(71,74,114,117..118,121)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          126..169
                     /region_name="HALZ"
                     /note="homeobox associated leucin zipper; smart00340"
                     /db_xref="CDD:128634"
     CDS             1..233
                     /gene="LOC107921257"
                     /coded_by="XM_016851134.2:387..1088"
                     /db_xref="GeneID:107921257"
ORIGIN      
        1 mavlptgssh leltisvpgf asspsfpssg dqggctvrdl dinqvpaede witasmedee
       61 escnngappr kklrltkeqs rlleesfrln htlnpkqkga lalqlklrpr qvevwfqnrr
      121 arsklkqtem eceylkrwfg slteqnrrlq reveelramk vapptvisph sceplpastl
      181 tmcprcervt ttttaaiekg sakmtaatnr tattlsskvg tsalqsrpss aac
//
LOCUS       XP_016706638             156 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat extensin-like protein 5 [Gossypium hirsutum].
ACCESSION   XP_016706638
VERSION     XP_016706638.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851149.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="leucine-rich repeat extensin-like protein 5"
                     /calculated_mol_wt=17074
     Region          <44..>132
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     CDS             1..156
                     /gene="LOC107921276"
                     /coded_by="XM_016851149.2:104..574"
                     /db_xref="GeneID:107921276"
ORIGIN      
        1 manthnksls tflllfssii lsffvktkqd npcpypcypp ptatgtpiqt ppvsysppsq
       61 tglypppgtl ptgnlpyfpp pppppppspy gnslygqppp dpilpyfpyy yrkpphqtdd
      121 qssatkastg kpwmimiatt nlfvfvfllf relvss
//
LOCUS       XP_016707057             144 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich receptor-like protein kinase PERK2 [Gossypium
            hirsutum].
ACCESSION   XP_016707057
VERSION     XP_016707057.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851568.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707057.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..144
                     /product="proline-rich receptor-like protein kinase PERK2"
                     /calculated_mol_wt=15189
     CDS             1..144
                     /gene="LOC107921752"
                     /coded_by="XM_016851568.2:304..738"
                     /db_xref="GeneID:107921752"
ORIGIN      
        1 msmkthrwin phqilsslti ffaitifvyp ingmesrrld dstvpggqgv kctpsciqsp
       61 pppslpppcp pppsppalpp ptpkkpptqy cppppippsp psfiyipgsp gnlysidqnf
      121 gganrnvavg llglvcglsl lfaf
//
LOCUS       XP_040943246             309 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943246
VERSION     XP_040943246.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087312.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..309
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35555
     Region          <1..144
                     /region_name="MAD"
                     /note="Mitotic checkpoint protein; pfam05557"
                     /db_xref="CDD:461677"
     CDS             1..309
                     /gene="LOC121213934"
                     /coded_by="XM_041087312.1:1..930"
                     /db_xref="GeneID:121213934"
ORIGIN      
        1 mlmrnealek slsdsqrekg elkdrvtele rslchyrnrn saiqlrasls kidemkekik
       61 eletalqnce irieslevne srnneqlyyf rnqvrsrdhi meepvvqire vadhiqtlaa
      121 qadmlrlere eslvvhfged nedpvypsgf tpisvqpdmr pqrvpltiks qqyqidtltp
      181 inrpmgsrsn frnnlanpit ldnpteikqa rveypdtika pkrkgnkgdn agrynkghsk
      241 pivvgrpkte ttshqsplkr esytkienct afkkiverfi nigivkfdea ssaenllpnh
      301 idnwgecne
//
LOCUS       XP_016707902             370 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707902
VERSION     XP_016707902.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852413.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707902.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..370
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40988
     Region          29..317
                     /region_name="MALA"
                     /note="Mala s 1 allergenic protein and similar proteins;
                     cd12811"
                     /db_xref="CDD:411995"
     Region          36..74
                     /region_name="propeller blade 1"
                     /note="propeller blade 1 [structural motif]"
                     /db_xref="CDD:411995"
     Site            order(40,105,110,188,250,310)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:411995"
     Region          84..129
                     /region_name="propeller blade 2"
                     /note="propeller blade 2 [structural motif]"
                     /db_xref="CDD:411995"
     Region          148..182
                     /region_name="propeller blade 3"
                     /note="propeller blade 3 [structural motif]"
                     /db_xref="CDD:411995"
     Region          205..239
                     /region_name="propeller blade 4"
                     /note="propeller blade 4 [structural motif]"
                     /db_xref="CDD:411995"
     CDS             1..370
                     /gene="LOC107922394"
                     /coded_by="XM_016852413.2:322..1434"
                     /db_xref="GeneID:107922394"
ORIGIN      
        1 mspiktsfis lviivtmgva vavagkthvi dfrwpnlype gmawdplaqh fivgslnhrt
       61 ihsvsdagvv etlisdptlp envtvlgltv dftknrllac lhsvsplppf nalvaydlrt
      121 rrrlflsllp sdpdsliasi grgrdvandv avdfkgnayv tnsvgnfiwk vneegeawif
      181 srspafsryp svmgenepfn dcglngiayv skgyllvvqs ntgkmfkvde engkartvll
      241 nqdlvmpdgi airrdgvvlv vstqklwflk sddswgegvv ydktaleeeg fatsvvvgee
      301 grayvlyghv megingkere gfkivevrse resgeehvwi yvllglglay fliwrfqmkq
      361 lvnnmdkkin
//
LOCUS       XP_040943248             355 aa            linear   PLN 06-AUG-2024
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating],
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943248
VERSION     XP_040943248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087314.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating], chloroplastic"
                     /calculated_mol_wt=38466
     Region          38..342
                     /region_name="PLN02716"
                     /note="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
                     /db_xref="CDD:178318"
     CDS             1..355
                     /gene="LOC107922492"
                     /coded_by="XM_041087314.1:229..1296"
                     /db_xref="GeneID:107922492"
ORIGIN      
        1 msgilsfpsi vlpdwcstss crrgvrmaaa htthaglsle amaikppshp tydlngivkl
       61 alaedagnrg dvtcmatipv dmeveacfla kedgiiagia laemvfqevd pslkvewsre
      121 dgdyvckglq fgkvygrahs ivvaerialn fmqrmsgiat ltkamadaay payiletrkt
      181 apglrlvdkw avligggrnh rlglfdmvli kdnhisiagg isnalrsvdq ylerenlqme
      241 vevetrtlve vkevlqyssq mktsltriml dnmviplpng dvdmsmlkea velingkfet
      301 easgnvtlkt vhkigqtgvt yissgalths vtaldislki dtglalevgr rtkra
//
LOCUS       XP_016708047             355 aa            linear   PLN 06-AUG-2024
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating],
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016708047
VERSION     XP_016708047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852558.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating], chloroplastic"
                     /calculated_mol_wt=38466
     Region          38..342
                     /region_name="PLN02716"
                     /note="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
                     /db_xref="CDD:178318"
     CDS             1..355
                     /gene="LOC107922492"
                     /coded_by="XM_016852558.2:179..1246"
                     /db_xref="GeneID:107922492"
ORIGIN      
        1 msgilsfpsi vlpdwcstss crrgvrmaaa htthaglsle amaikppshp tydlngivkl
       61 alaedagnrg dvtcmatipv dmeveacfla kedgiiagia laemvfqevd pslkvewsre
      121 dgdyvckglq fgkvygrahs ivvaerialn fmqrmsgiat ltkamadaay payiletrkt
      181 apglrlvdkw avligggrnh rlglfdmvli kdnhisiagg isnalrsvdq ylerenlqme
      241 vevetrtlve vkevlqyssq mktsltriml dnmviplpng dvdmsmlkea velingkfet
      301 easgnvtlkt vhkigqtgvt yissgalths vtaldislki dtglalevgr rtkra
//
LOCUS       XP_016708048             355 aa            linear   PLN 06-AUG-2024
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating],
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016708048
VERSION     XP_016708048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852559.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating], chloroplastic"
                     /calculated_mol_wt=38466
     Region          38..342
                     /region_name="PLN02716"
                     /note="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
                     /db_xref="CDD:178318"
     CDS             1..355
                     /gene="LOC107922492"
                     /coded_by="XM_016852559.2:172..1239"
                     /db_xref="GeneID:107922492"
ORIGIN      
        1 msgilsfpsi vlpdwcstss crrgvrmaaa htthaglsle amaikppshp tydlngivkl
       61 alaedagnrg dvtcmatipv dmeveacfla kedgiiagia laemvfqevd pslkvewsre
      121 dgdyvckglq fgkvygrahs ivvaerialn fmqrmsgiat ltkamadaay payiletrkt
      181 apglrlvdkw avligggrnh rlglfdmvli kdnhisiagg isnalrsvdq ylerenlqme
      241 vevetrtlve vkevlqyssq mktsltriml dnmviplpng dvdmsmlkea velingkfet
      301 easgnvtlkt vhkigqtgvt yissgalths vtaldislki dtglalevgr rtkra
//
LOCUS       XP_016708050             355 aa            linear   PLN 06-AUG-2024
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating],
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016708050
VERSION     XP_016708050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852561.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating], chloroplastic"
                     /calculated_mol_wt=38466
     Region          38..342
                     /region_name="PLN02716"
                     /note="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
                     /db_xref="CDD:178318"
     CDS             1..355
                     /gene="LOC107922492"
                     /coded_by="XM_016852561.2:208..1275"
                     /db_xref="GeneID:107922492"
ORIGIN      
        1 msgilsfpsi vlpdwcstss crrgvrmaaa htthaglsle amaikppshp tydlngivkl
       61 alaedagnrg dvtcmatipv dmeveacfla kedgiiagia laemvfqevd pslkvewsre
      121 dgdyvckglq fgkvygrahs ivvaerialn fmqrmsgiat ltkamadaay payiletrkt
      181 apglrlvdkw avligggrnh rlglfdmvli kdnhisiagg isnalrsvdq ylerenlqme
      241 vevetrtlve vkevlqyssq mktsltriml dnmviplpng dvdmsmlkea velingkfet
      301 easgnvtlkt vhkigqtgvt yissgalths vtaldislki dtglalevgr rtkra
//
LOCUS       XP_016708049             355 aa            linear   PLN 06-AUG-2024
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating],
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016708049
VERSION     XP_016708049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852560.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating], chloroplastic"
                     /calculated_mol_wt=38466
     Region          38..342
                     /region_name="PLN02716"
                     /note="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
                     /db_xref="CDD:178318"
     CDS             1..355
                     /gene="LOC107922492"
                     /coded_by="XM_016852560.2:165..1232"
                     /db_xref="GeneID:107922492"
ORIGIN      
        1 msgilsfpsi vlpdwcstss crrgvrmaaa htthaglsle amaikppshp tydlngivkl
       61 alaedagnrg dvtcmatipv dmeveacfla kedgiiagia laemvfqevd pslkvewsre
      121 dgdyvckglq fgkvygrahs ivvaerialn fmqrmsgiat ltkamadaay payiletrkt
      181 apglrlvdkw avligggrnh rlglfdmvli kdnhisiagg isnalrsvdq ylerenlqme
      241 vevetrtlve vkevlqyssq mktsltriml dnmviplpng dvdmsmlkea velingkfet
      301 easgnvtlkt vhkigqtgvt yissgalths vtaldislki dtglalevgr rtkra
//
LOCUS       XP_016707233            1704 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
            [Gossypium hirsutum].
ACCESSION   XP_016707233
VERSION     XP_016707233.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851744.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707233.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1704
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C"
                     /calculated_mol_wt=189792
     Region          11..76
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cd00065"
                     /db_xref="CDD:277249"
     Site            order(25..30,35,70)
                     /site_type="other"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]"
                     /db_xref="CDD:277249"
     Region          359..629
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1432..1695
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1479,1488,1490,1550..1553,1564,1583,1630,1645..1646)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1704
                     /gene="LOC107921947"
                     /coded_by="XM_016851744.2:1163..6277"
                     /db_xref="GeneID:107921947"
ORIGIN      
        1 mlkngvcqkm ccsecytkfa defshrypcq scgrwlcskc veryeshvvd dvyqsdnaks
       61 ndfskmmsvk cckfccdgvn arpesggrky sekvhpsesp respeppspc smnsesirsd
      121 hlaqhleahd cgfplpvvag ksmtsvsthp spistqqsas rsdeedadgt gkqfyspsae
      181 ysqdvsdids csisarhefn scksvgssps vspsrnsftp yrdghsvqqr qegspmaqcv
      241 gpfgqenmav lrkppetvme qentddysdd asvvgnqssk lqkpldfenn gliwypppae
      301 dendeaesnf ftyddedddv gdsgamfsss ssfssmfpak ekqegnkepi raviqghfra
      361 lvsqlllgeg ievednaggw ldivtavawq aanfvkpdts rggsmdpgdy vkvkciasgt
      421 psestlvkgv vctknvkhkr mtsqyknprl lllggalefl kvpnqlasfs tllqqendhl
      481 kmiiakieal rpnvllveks assyaqeyll tkeislvlnv krplleriar ctgalvcpsi
      541 ddlyttrlgh celfrlekvs eehemanqfn kkpsktlmff egcprrlcct vllrgrcree
      601 lkkvkhvvqy aifaayhlsl etsfladega tlpkmkvkhs ismpekiqad stvsvvpnsy
      661 ppssfdaivn asaqndispc ldpaqggmgs lseqcdqshl fpssggsild vynddwspia
      721 cldtyssedf kdsklssmlp dirdfprsel qetmteeetr lgeihelvkp ekidedenss
      781 eyfsatdthq silvsfssrc vlkgtvcera rllrikfygs fdkplgrylh ddlfdqascc
      841 rscnepaeah vicythqqgn ltinvrrlss lklpgerdgk iwmwhrclkc vhingvppat
      901 hrvvmsdaaw glsfgkflel sfsnhatanr vatcghslqr dclrfygfgn mvaffryspi
      961 dilsvhlpps tlefsgniqq ewtrkeaael ivkmemsyve vsdvldsieq ksnsagcqss
     1021 nasdlsdhvv elreqiqker ddyngllqpv vmessqlgpt avdilelnrl rrsllislyv
     1081 wdqqlhsles hikkgsavkv kadhsndgkl gvceqnvyrs pdsqvppknd iqsennnils
     1141 nlesvvpkes dlvlynkide dvqsdgnits pasalserid sawtgtdllt lkvqtteafq
     1201 edelptglir qmnkisdlrl rnvasprrlh sfdsalrfqe rikkglhpss splsvlrsfh
     1261 asgdyrsmvr dpvsnvtgty shalpleaqk lnlllsstpt mitsashvae gtrlllsqrg
     1321 hsdiviavyd ndpasiisya lsskeydewv tgksseiggg wsvseksked saassfspwq
     1381 sfgsldldyi rygsfsseda sssvgstfad tkrsphltvs fgddsaaagg kvkfsvtcyf
     1441 akqfdslrrk ccpsevdflr slsrckkwsa qggksnvyfa ktfderfiik qvqktelesf
     1501 defaleyfky ltdsvssgsp tclakilgiy qvsvkhlkgg ketrmdlivm enlffrrsis
     1561 tvydlkgsir srynpdtsgt nkvlldmnll etlrtepifl gskakrnler aiwndtsfla
     1621 svdvmdysll vgvdeerkel vlgiidfmrq ytwdkhletw vkasgilggp knasptiisp
     1681 kqykkrfrka mttyfltipd qwss
//
LOCUS       XP_016707142             225 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g66480 [Gossypium hirsutum].
ACCESSION   XP_016707142
VERSION     XP_016707142.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851653.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="uncharacterized protein At1g66480"
                     /calculated_mol_wt=24350
     Region          1..134
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..225
                     /gene="LOC107921809"
                     /coded_by="XM_016851653.2:95..772"
                     /db_xref="GeneID:107921809"
ORIGIN      
        1 mgnslaakkt tkvmkinget lklktpvrae dvvkdypghv lleseavkhf gvrakpleah
       61 hglepkrlyf lvvlpegpke rvprrvrsgv nmsakdrleg lmlsrrsvsd ltlmkgestg
      121 aekgesgamr vrlrvpkaev erlikesene gevvekimql ctanggnspc egavkgkqqv
      181 rwagshgstg egfkarekrv sfvavkeggg sqievgsgae rnqin
//
LOCUS       XP_016707737             569 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 11 [Gossypium hirsutum].
ACCESSION   XP_016707737
VERSION     XP_016707737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..569
                     /product="U-box domain-containing protein 11"
                     /calculated_mol_wt=61251
     Region          250..302
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(251,254,256..259,278,282,291)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          341..>559
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          349..374
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          391..416
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(407,411,415,448,452,456,489,493,497)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          423..459
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          464..498
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          507..541
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..569
                     /gene="LOC107922283"
                     /coded_by="XM_016852248.2:378..2087"
                     /db_xref="GeneID:107922283"
ORIGIN      
        1 maagvvsdas aafllslvhd ivlgdlaagm fkkdctdlvr rialfthlle eirdfaasdh
       61 phasssssss ssswsadlav alqaakrlls aasahhsans sdgaakrisf qfqcvtwkle
      121 kslakipfdq fqiseevqeq valvraqlrr aterygslns rkvsnaisql pekersntnh
      181 eisakldsip escttlghaa dketkilerv nsssipsevc lsnevdskgq enlaakgaeq
      241 tkkpdtlvip vdflcpisle lmrdpvivat gqtyersyiq rwidcgnvtc pktqqklenl
      301 tltpnyvlrs vinqwcakhn ieqpsglang rlkksngsfc disgdmaaiq elvsklssrc
      361 leerraavae irslskrstd nriliadtga ipvlvnlltt ddasiqehav tsilnlsife
      421 nnkslimlag avpsivqvlr agsmearena aatlfslsla denkiiigss gaipalvdll
      481 qngsnrgkkd aatalfnlci yqgnkgravr agiitallkm ltdsrncmvd ealtilsila
      541 snhdakaaiv kastipvlid llrtglprn
//
LOCUS       XP_016706746             253 aa            linear   PLN 06-AUG-2024
DEFINITION  myb-related protein 308 [Gossypium hirsutum].
ACCESSION   XP_016706746
VERSION     XP_016706746.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851257.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..253
                     /product="myb-related protein 308"
                     /calculated_mol_wt=28653
     Region          4..>135
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..253
                     /gene="LOC107921404"
                     /coded_by="XM_016851257.2:107..868"
                     /db_xref="GeneID:107921404"
ORIGIN      
        1 mrkpccdkrd tnkgawsmqe dekllnyirk ngeagcwrtl pqaagllrcg kscrlrwiny
       61 lrpdvkrgnf gededdliik lhallgnrws liagrlpgrt dnevknywns hlrrklinmg
      121 idpnkhsltr hnrphhnsnt ntsasatlis sasklpkshk cialpnnkpw rdndqvsdaa
      181 scllededdd nlpcsttqyq lpdlnlelti svsaptakle qhihqiqepn hkqcsnissd
      241 lhfsptptll lfh
//
LOCUS       XP_016706653             609 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-interacting protein 1-2 [Gossypium hirsutum].
ACCESSION   XP_016706653
VERSION     XP_016706653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="actin-interacting protein 1-2"
                     /calculated_mol_wt=66085
     Region          49..352
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(56,74,78,84..85,98..99,117,121,130..131,143..144,
                     162,167,173..174,187,204,209,215..216,231..232,250,254,
                     260..261,281..282,298,308..309,322..323,342,346,352)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          61..98
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..275
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          282..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          367..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          413..432
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          450..489
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <457..>606
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          495..532
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..574
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..609
                     /gene="LOC107921291"
                     /coded_by="XM_016851164.2:106..1935"
                     /db_xref="GeneID:107921291"
ORIGIN      
        1 maslietyac apstergrgi lisgdpktns ilycnarsvf iryldrplhi avygdhsypv
       61 tvaryspnge wiasadvsgi iriwgthndf vlknefkvls griddlqwsp dglrivacgd
      121 gkgksfvraf mwdsgstvgd fdghskrvls chfkptrpfr iascgedflv nfyegppfkf
      181 klshrehsnf vncirfspdg sklisvssdk kgiiydaktg dtmgqlssed ghtgsiyavs
      241 wsgdgkhvlt vsadktakiw eifedgtgkv sktlecsgsg gvedmlvgcl wqnghlitvs
      301 lsgtinlysa sdpdkqplcl sghmknvntl tliesnekii lsssfdgsil rwtpgtghsg
      361 klqrkdssqi kclvatkeei mtsgydnkvw risldqdkag eaehidvgsq pkdlsqains
      421 pdlalvslds gvvllkdmqi lsninlgfsv tasviapdgs eaivggqdgk lhiysvsgds
      481 lteeatlekh rgpisvirys pdfsmfasad lnreavvwdr tskevklnnm lfhtarincl
      541 awspnstmva tgsldtcvii yevgkpassr itvknahpgg vyglvfidac nvassgedac
      601 irvwkivqq
//
LOCUS       XP_016706656             609 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-interacting protein 1-2 [Gossypium hirsutum].
ACCESSION   XP_016706656
VERSION     XP_016706656.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851167.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="actin-interacting protein 1-2"
                     /calculated_mol_wt=66085
     Region          49..352
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(56,74,78,84..85,98..99,117,121,130..131,143..144,
                     162,167,173..174,187,204,209,215..216,231..232,250,254,
                     260..261,281..282,298,308..309,322..323,342,346,352)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          61..98
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..275
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          282..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          367..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          413..432
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          450..489
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <457..>606
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          495..532
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..574
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..609
                     /gene="LOC107921291"
                     /coded_by="XM_016851167.2:106..1935"
                     /db_xref="GeneID:107921291"
ORIGIN      
        1 maslietyac apstergrgi lisgdpktns ilycnarsvf iryldrplhi avygdhsypv
       61 tvaryspnge wiasadvsgi iriwgthndf vlknefkvls griddlqwsp dglrivacgd
      121 gkgksfvraf mwdsgstvgd fdghskrvls chfkptrpfr iascgedflv nfyegppfkf
      181 klshrehsnf vncirfspdg sklisvssdk kgiiydaktg dtmgqlssed ghtgsiyavs
      241 wsgdgkhvlt vsadktakiw eifedgtgkv sktlecsgsg gvedmlvgcl wqnghlitvs
      301 lsgtinlysa sdpdkqplcl sghmknvntl tliesnekii lsssfdgsil rwtpgtghsg
      361 klqrkdssqi kclvatkeei mtsgydnkvw risldqdkag eaehidvgsq pkdlsqains
      421 pdlalvslds gvvllkdmqi lsninlgfsv tasviapdgs eaivggqdgk lhiysvsgds
      481 lteeatlekh rgpisvirys pdfsmfasad lnreavvwdr tskevklnnm lfhtarincl
      541 awspnstmva tgsldtcvii yevgkpassr itvknahpgg vyglvfidac nvassgedac
      601 irvwkivqq
//
LOCUS       XP_016706654             609 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-interacting protein 1-2 [Gossypium hirsutum].
ACCESSION   XP_016706654
VERSION     XP_016706654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="actin-interacting protein 1-2"
                     /calculated_mol_wt=66085
     Region          49..352
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(56,74,78,84..85,98..99,117,121,130..131,143..144,
                     162,167,173..174,187,204,209,215..216,231..232,250,254,
                     260..261,281..282,298,308..309,322..323,342,346,352)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          61..98
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..275
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          282..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          367..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          413..432
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          450..489
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <457..>606
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          495..532
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..574
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..609
                     /gene="LOC107921291"
                     /coded_by="XM_016851165.2:106..1935"
                     /db_xref="GeneID:107921291"
ORIGIN      
        1 maslietyac apstergrgi lisgdpktns ilycnarsvf iryldrplhi avygdhsypv
       61 tvaryspnge wiasadvsgi iriwgthndf vlknefkvls griddlqwsp dglrivacgd
      121 gkgksfvraf mwdsgstvgd fdghskrvls chfkptrpfr iascgedflv nfyegppfkf
      181 klshrehsnf vncirfspdg sklisvssdk kgiiydaktg dtmgqlssed ghtgsiyavs
      241 wsgdgkhvlt vsadktakiw eifedgtgkv sktlecsgsg gvedmlvgcl wqnghlitvs
      301 lsgtinlysa sdpdkqplcl sghmknvntl tliesnekii lsssfdgsil rwtpgtghsg
      361 klqrkdssqi kclvatkeei mtsgydnkvw risldqdkag eaehidvgsq pkdlsqains
      421 pdlalvslds gvvllkdmqi lsninlgfsv tasviapdgs eaivggqdgk lhiysvsgds
      481 lteeatlekh rgpisvirys pdfsmfasad lnreavvwdr tskevklnnm lfhtarincl
      541 awspnstmva tgsldtcvii yevgkpassr itvknahpgg vyglvfidac nvassgedac
      601 irvwkivqq
//
LOCUS       XP_016707908             396 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14A [Gossypium hirsutum].
ACCESSION   XP_016707908
VERSION     XP_016707908.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852419.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707908.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..396
                     /product="beta-glucuronosyltransferase GlcAT14A"
                     /calculated_mol_wt=45147
     Region          4..395
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..396
                     /gene="LOC107922399"
                     /coded_by="XM_016852419.2:1040..2230"
                     /db_xref="GeneID:107922399"
ORIGIN      
        1 mgaekkwlft lfsttifsil llllysisvf ssprlfpslv qhglhsppaf ayylfggkgd
       61 kdrifrllla vyhprnryll qlgadasdee ryrlvlalks vpavrsfenv dvigkpdrfs
      121 smgsthiaat lhaaamlmkl drgwdwfial saldyplvtq ddlshvfssv rrdlnfidht
      181 sdlgwkedqr vlpivvdpgi ylarrtkifh atqkrlmpda fkvftgspwv vlsrsflefc
      241 lfgwdnlprt llmyfnnvml seesyfhsvi cnspefkntt vngdlrymiw dsppktephf
      301 lngsdydqma qsgaafarqf qkddpvldmi dekilkcgrn ravpgawctg rrswwvdpcs
      361 qwgdvnvlkp gpqakkleet ilnllddwns psnqct
//
LOCUS       XP_040943249             720 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 7 [Gossypium hirsutum].
ACCESSION   XP_040943249
VERSION     XP_040943249.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087315.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..720
                     /product="ABC transporter G family member 7"
                     /calculated_mol_wt=78277
     Region          93..658
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..720
                     /gene="LOC107922192"
                     /coded_by="XM_041087315.1:269..2431"
                     /db_xref="GeneID:107922192"
ORIGIN      
        1 mafgakkvgh vvsgiggngm gqilaamaaa llirlfsgpg paslpedetc eendsvngdd
       61 appsagkvlp vtitwrnitc slsdkhsksv rfllkdvsge akpgrllavm gpsgsgkttl
      121 lnvlasqila sprlalsgll efngkpsstk aykfayvrqe dlffsqltvr etlslaaelq
      181 lpeissieer deyvnnllfk lglvscadsi igdakvrgis ggekkrlslg celiaspsvi
      241 fadepttgld afqaekvmet lrllaqdght vicsihqprg svygkfddiv lltegtlvya
      301 gpardqpley fsrfgyqcpd hvnpaeflad lisidysssh svysskkrid alveafstqs
      361 savlyatplt gktgpkqgmk fgkkiaakrk ggwwkqfwll lkracmqasr dgptnkvrtr
      421 msiasaiifg svfwrmgrsq tsildrmgll qvtaintama altktvgvfp keraivdrer
      481 akgsyalgpy llskliaeip vgaafplmfg avlypmarlh ptfsrfgkfc givtvesfaa
      541 samgltvgsm vptteaamal gpslmtvfiv fggyyvtadn tpiifrwipr aslirwafqg
      601 lcineftglk fdcqnsfdiq tgeqalyrys lggtcirdtv iaqsrillfw ysttylllek
      661 nkpkylllka paseqiepkl kleplletdq ppplkqveqn qqvestpvdq tepfilegak
//
LOCUS       XP_016706318             260 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ribose-5-phosphate isomerase 2 [Gossypium hirsutum].
ACCESSION   XP_016706318
VERSION     XP_016706318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850829.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..260
                     /product="probable ribose-5-phosphate isomerase 2"
                     /calculated_mol_wt=27853
     Region          1..260
                     /region_name="PLN02384"
                     /note="ribose-5-phosphate isomerase"
                     /db_xref="CDD:215215"
     Site            order(54,84,87..88,97,99,126..127,193,202,204,208)
                     /site_type="other"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238692"
     Site            order(54,56..57,111..112,114,124..127,133,151)
                     /site_type="active"
                     /db_xref="CDD:238692"
     Site            order(100,104,132,139,169..170,172..174,177,229..230,235)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238692"
     CDS             1..260
                     /gene="LOC107920983"
                     /coded_by="XM_016850829.2:405..1187"
                     /db_xref="GeneID:107920983"
ORIGIN      
        1 maiawsekas yvevlsrpps lsppviltqd elkkiaayka vefvesgmvl glgtgstakh
       61 avdrigellr lgklknivgi ptskktqeqa vslgiplsdl dhhstidlai dgadevdphl
      121 nlvkgrggsl lrekmvegtc kkficivdes klvkhlggsg lampvevvpf cwkftanklq
      181 nlfedsgcva klrndskgks fvtdngnytv dlylkkdigd lqvasdailr iagvvehgmf
      241 ldmattviva gelgitiknk
//
LOCUS       XP_016707889             543 aa            linear   PLN 06-AUG-2024
DEFINITION  sphingosine-1-phosphate lyase [Gossypium hirsutum].
ACCESSION   XP_016707889
VERSION     XP_016707889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852400.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..543
                     /product="sphingosine-1-phosphate lyase"
                     /calculated_mol_wt=59091
     Region          149..500
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(205..206,209,282,311,314,345,348)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99742"
     Site            348
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
     CDS             1..543
                     /gene="LOC107922384"
                     /coded_by="XM_016852400.2:141..1772"
                     /db_xref="GeneID:107922384"
ORIGIN      
        1 mdsysswlns flvrfrlsan lflsqfepla lllaplltlf iarllhslls vihekglkat
       61 vlalfmssik lvpgvqsyid aekqkvvdkl qsgskskreh wrtelpttgl gvgvieemkd
      121 vksndadwkg kcsgtvyigg seseghfsli neassmfaht nplhldvfqs varfeaevva
      181 mtadllgske kasggqvcgn mtsggtesil lavktsrdym kakkgitrpe miiaesahsa
      241 ydkaaqyfni klrrvpvnke fkadvkairk qinrktiliv gsapgyphgi idpieelgkl
      301 adsygiclhv dlclggfvlp farklgypil pfdftvrgvt sisadvhkyg lapkgtsvvl
      361 yrnhdirkhq fvavtewsgg lyvsptiags rpggviagaw aammslgqqg ylentrkime
      421 vskmiqkgik eipelfiign pdmtivafgs avldifevnd imsgkgwhln alqrpnsihi
      481 cvtlqhvpvv daflqdlrea vqtvkenpgp isgglapiyg aagkmpdrgm vqdllvnymd
      541 gtc
//
LOCUS       XP_040943250             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943250
VERSION     XP_040943250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087316.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30077
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..226
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..265
                     /gene="LOC107922386"
                     /coded_by="XM_041087316.1:615..1412"
                     /db_xref="GeneID:107922386"
ORIGIN      
        1 mgdhfvllvd rlitestlea aiesrnrsfq atasvvddtk vfnsspklnl sslgeivecr
       61 icqdedvdsn metpcaccgs lkyahrrcvq rwcnekgntt ceichqqfrp gytappplfh
      121 igripmnfrg nweisrreln nsgfiavvst dhslldsryd eylasttrsl tgyrmvailf
      181 mlllvlrhil pvllrgsddf sfplfisill rtigiilpmy vifktvtall rrrqhqetpn
      241 slfaeseeen evaimqtqph ivnih
//
LOCUS       XP_016707890             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707890
VERSION     XP_016707890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30077
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..226
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..265
                     /gene="LOC107922386"
                     /coded_by="XM_016852401.2:301..1098"
                     /db_xref="GeneID:107922386"
ORIGIN      
        1 mgdhfvllvd rlitestlea aiesrnrsfq atasvvddtk vfnsspklnl sslgeivecr
       61 icqdedvdsn metpcaccgs lkyahrrcvq rwcnekgntt ceichqqfrp gytappplfh
      121 igripmnfrg nweisrreln nsgfiavvst dhslldsryd eylasttrsl tgyrmvailf
      181 mlllvlrhil pvllrgsddf sfplfisill rtigiilpmy vifktvtall rrrqhqetpn
      241 slfaeseeen evaimqtqph ivnih
//
LOCUS       XP_016707891             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707891
VERSION     XP_016707891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30077
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..226
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..265
                     /gene="LOC107922386"
                     /coded_by="XM_016852402.2:279..1076"
                     /db_xref="GeneID:107922386"
ORIGIN      
        1 mgdhfvllvd rlitestlea aiesrnrsfq atasvvddtk vfnsspklnl sslgeivecr
       61 icqdedvdsn metpcaccgs lkyahrrcvq rwcnekgntt ceichqqfrp gytappplfh
      121 igripmnfrg nweisrreln nsgfiavvst dhslldsryd eylasttrsl tgyrmvailf
      181 mlllvlrhil pvllrgsddf sfplfisill rtigiilpmy vifktvtall rrrqhqetpn
      241 slfaeseeen evaimqtqph ivnih
//
LOCUS       XP_040943251             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943251
VERSION     XP_040943251.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087317.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30077
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..226
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..265
                     /gene="LOC107922386"
                     /coded_by="XM_041087317.1:444..1241"
                     /db_xref="GeneID:107922386"
ORIGIN      
        1 mgdhfvllvd rlitestlea aiesrnrsfq atasvvddtk vfnsspklnl sslgeivecr
       61 icqdedvdsn metpcaccgs lkyahrrcvq rwcnekgntt ceichqqfrp gytappplfh
      121 igripmnfrg nweisrreln nsgfiavvst dhslldsryd eylasttrsl tgyrmvailf
      181 mlllvlrhil pvllrgsddf sfplfisill rtigiilpmy vifktvtall rrrqhqetpn
      241 slfaeseeen evaimqtqph ivnih
//
LOCUS       XP_016706769             140 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706769
VERSION     XP_016706769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..140
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15412
     CDS             1..140
                     /gene="LOC107921431"
                     /coded_by="XM_016851280.2:261..683"
                     /db_xref="GeneID:107921431"
ORIGIN      
        1 mmrsrlenqr hedqysrafh elwglvmsll rsplapvpsa sqspalstsp hsppvptmkk
       61 ispsefallm lgtsvslmlc gsvtffigfm lmpwllclvm vlyiagivsa vsmlcrstic
      121 yamapllrrk eipgllqsrn
//
LOCUS       XP_040943252             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943252
VERSION     XP_040943252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087318.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15353
     CDS             1..139
                     /gene="LOC107921431"
                     /coded_by="XM_041087318.1:261..680"
                     /db_xref="GeneID:107921431"
ORIGIN      
        1 mmrsrlenqr hedqysrafh elwglvmsll rsplapvpsa sqspalstsp hsppvptmkk
       61 ispsefallm lgtsvslmlc gsvtffigfm lmpwllclvm vlyiagivsa vsmlcrstic
      121 yamapllrrk eipeqelnp
//
LOCUS       XP_016708116             152 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708116
VERSION     XP_016708116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..152
                     /product="nuclear transport factor 2B isoform X1"
                     /calculated_mol_wt=16355
     Region          32..151
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(60,66,73,98,100..101,110,133,144..146,148,150)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(64,66..67,95..96,98,100..101,108,112..114,119,
                     121..124,127,133,144..146,148..151)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(67..68,85,90,113,115,117,119,121,124,147,149,151)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     CDS             1..152
                     /gene="LOC107922543"
                     /coded_by="XM_016852627.2:16..474"
                     /db_xref="GeneID:107922543"
ORIGIN      
        1 mgsaglasln ycvtallfdg snsdkqkeks mdpdavakaf vdhyystfda nraglanlyq
       61 egsmltfegq kiqgsqsiva kltslpfqqc khnistvdcq psgaggvlvf vsgtlqlage
      121 qhalkfsqmf hlmptpqgsf yvlndifrln ya
//
LOCUS       XP_040943253             152 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943253
VERSION     XP_040943253.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087319.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..152
                     /product="nuclear transport factor 2B isoform X1"
                     /calculated_mol_wt=16355
     Region          32..151
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(60,66,73,98,100..101,110,133,144..146,148,150)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(64,66..67,95..96,98,100..101,108,112..114,119,
                     121..124,127,133,144..146,148..151)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(67..68,85,90,113,115,117,119,121,124,147,149,151)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     CDS             1..152
                     /gene="LOC107922543"
                     /coded_by="XM_041087319.1:16..474"
                     /db_xref="GeneID:107922543"
ORIGIN      
        1 mgsaglasln ycvtallfdg snsdkqkeks mdpdavakaf vdhyystfda nraglanlyq
       61 egsmltfegq kiqgsqsiva kltslpfqqc khnistvdcq psgaggvlvf vsgtlqlage
      121 qhalkfsqmf hlmptpqgsf yvlndifrln ya
//
LOCUS       XP_016708115             162 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708115
VERSION     XP_016708115.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852626.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708115.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="nuclear transport factor 2B isoform X2"
                     /calculated_mol_wt=17584
     Region          42..161
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(70,76,83,108,110..111,120,143,154..156,158,160)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(74,76..77,105..106,108,110..111,118,122..124,129,
                     131..134,137,143,154..156,158..161)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(77..78,95,100,123,125,127,129,131,134,157,159,161)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     CDS             1..162
                     /gene="LOC107922543"
                     /coded_by="XM_016852626.2:49..537"
                     /db_xref="GeneID:107922543"
ORIGIN      
        1 mnppintqfw mgsaglasln ycvtallfdg snsdkqkeks mdpdavakaf vdhyystfda
       61 nraglanlyq egsmltfegq kiqgsqsiva kltslpfqqc khnistvdcq psgaggvlvf
      121 vsgtlqlage qhalkfsqmf hlmptpqgsf yvlndifrln ya
//
LOCUS       XP_040943254              99 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943254
VERSION     XP_040943254.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087320.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..99
                     /product="pentatricopeptide repeat-containing protein
                     At4g14190, chloroplastic"
                     /calculated_mol_wt=11345
     CDS             1..99
                     /gene="LOC107920992"
                     /coded_by="XM_041087320.1:369..668"
                     /db_xref="GeneID:107920992"
ORIGIN      
        1 mllvetyhqh crlraliekl ekegscpmqi lgddgdwtkn dfwaaikflr hafrsneilq
       61 gfmnslysqs faqfnkqpvn lqalqqgqgs qnqklqfng
//
LOCUS       XP_016706330              99 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706330
VERSION     XP_016706330.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850841.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..99
                     /product="pentatricopeptide repeat-containing protein
                     At4g14190, chloroplastic"
                     /calculated_mol_wt=11345
     CDS             1..99
                     /gene="LOC107920992"
                     /coded_by="XM_016850841.2:224..523"
                     /db_xref="GeneID:107920992"
ORIGIN      
        1 mllvetyhqh crlraliekl ekegscpmqi lgddgdwtkn dfwaaikflr hafrsneilq
       61 gfmnslysqs faqfnkqpvn lqalqqgqgs qnqklqfng
//
LOCUS       XP_016707674            1028 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine kinase 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707674
VERSION     XP_016707674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1028
                     /product="histidine kinase 3 isoform X1"
                     /calculated_mol_wt=115236
     Region          159..356
                     /region_name="CHASE"
                     /note="CHASE domain; pfam03924"
                     /db_xref="CDD:427591"
     Region          <435..1019
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
     CDS             1..1028
                     /gene="LOC107922254"
                     /coded_by="XM_016852185.2:485..3571"
                     /db_xref="GeneID:107922254"
ORIGIN      
        1 msllhvfgfg lkvghllwml ycwvasmisv nwfingefkg aeavllghsg skmwlkcwdk
       61 fsnysfnihh qyyqyvgskr isktwwrkll fswiigwila sisifyymsf qatekrmetl
      121 tsicderarm lqdqfnvsmn hiqaisilis tfhhgktpsa idqrtfaryt ertaferplt
      181 sgvayavrvl hsereqfekq qgwtikrmdt leqnpvhkdd ynpdllepsp iqeeyapvvf
      241 aqdiishvvs idmlsgqeds knvlcarksg kgvltapfrl lktnrlgvil tfavykrdlp
      301 lnatpteriq atdgylggvf dieslvekll qqlaskqtil vnvldttnqs ypismygsna
      361 sndglehvsl lnfgdpfrkh emrcrfkqkp pwpwlgitts igilviallv ghifhatvnr
      421 iakveddchk mmelkkqaea advaksqfla tvsheirtpm ngvlgmlhml mdtdldvtql
      481 dyvrtaqasg kalvalinev ldqakiesgk leleevqfdl railddvlsl fsgksqdkgv
      541 evvqlavyis dqvpqmligd pgrfrqiiin lmgnsikfte kghflvtvhl veevidsiev
      601 etesssentl sgfpvadrrq swkgfsqegl ihpfshsinl ivsvedtgeg ipleaqsrvf
      661 tpfmqvgpsi srthggtgig lsiskclvnl mkgeisfasi pkigstftft aiftsgssss
      721 kkyksqqink msnsvssefy gmralvmdpr pvrakvskyq irrlgihvev vskwkqglss
      781 icrgsnainm viveqevwdk ylnnstlffd tlekidygtp pkvfllsnsi sssganistg
      841 vcnmtvipkp lrssmlaaal qrtmgvgnkg npcngqlnsl slrnlllgrk ilivddnnvn
      901 lkvaagamkk ygadvvsatr gikaielltp phqfdacfmd iqmpemdgfe atrrirdmeh
      961 ninnrihhge lsveaynnvs nwhvsilamt adviqatree clwcgmdgyv skpfeaeqly
     1021 levsrffq
//
LOCUS       XP_016707675            1025 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine kinase 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707675
VERSION     XP_016707675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852186.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1025
                     /product="histidine kinase 3 isoform X2"
                     /calculated_mol_wt=114910
     Region          159..356
                     /region_name="CHASE"
                     /note="CHASE domain; pfam03924"
                     /db_xref="CDD:427591"
     Region          <435..1016
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
     CDS             1..1025
                     /gene="LOC107922254"
                     /coded_by="XM_016852186.2:667..3744"
                     /db_xref="GeneID:107922254"
ORIGIN      
        1 msllhvfgfg lkvghllwml ycwvasmisv nwfingefkg aeavllghsg skmwlkcwdk
       61 fsnysfnihh qyyqyvgskr isktwwrkll fswiigwila sisifyymsf qatekrmetl
      121 tsicderarm lqdqfnvsmn hiqaisilis tfhhgktpsa idqrtfaryt ertaferplt
      181 sgvayavrvl hsereqfekq qgwtikrmdt leqnpvhkdd ynpdllepsp iqeeyapvvf
      241 aqdiishvvs idmlsgqeds knvlcarksg kgvltapfrl lktnrlgvil tfavykrdlp
      301 lnatpteriq atdgylggvf dieslvekll qqlaskqtil vnvldttnqs ypismygsna
      361 sndglehvsl lnfgdpfrkh emrcrfkqkp pwpwlgitts igilviallv ghifhatvnr
      421 iakveddchk mmelkkqaea advaksqfla tvsheirtpm ngvlgmlhml mdtdldvtql
      481 dyvrtaqasg kalvalinev ldqakiesgk leleevqfdl railddvlsl fsgksqdkgv
      541 elavyisdqv pqmligdpgr frqiiinlmg nsikftekgh flvtvhlvee vidsievete
      601 sssentlsgf pvadrrqswk gfsqeglihp fshsinlivs vedtgegipl eaqsrvftpf
      661 mqvgpsisrt hggtgiglsi skclvnlmkg eisfasipki gstftftaif tsgsssskky
      721 ksqqinkmsn svssefygmr alvmdprpvr akvskyqirr lgihvevvsk wkqglssicr
      781 gsnainmviv eqevwdkyln nstlffdtle kidygtppkv fllsnsisss ganistgvcn
      841 mtvipkplrs smlaaalqrt mgvgnkgnpc ngqlnslslr nlllgrkili vddnnvnlkv
      901 aagamkkyga dvvsatrgik aielltpphq fdacfmdiqm pemdgfeatr rirdmehnin
      961 nrihhgelsv eaynnvsnwh vsilamtadv iqatreeclw cgmdgyvskp feaeqlylev
     1021 srffq
//
LOCUS       XP_016706617              68 aa            linear   PLN 06-AUG-2024
DEFINITION  stress-associated endoplasmic reticulum protein 2 [Gossypium
            hirsutum].
ACCESSION   XP_016706617
VERSION     XP_016706617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..68
                     /product="stress-associated endoplasmic reticulum protein
                     2"
                     /calculated_mol_wt=7350
     Region          4..59
                     /region_name="RAMP4"
                     /note="Ribosome associated membrane protein RAMP4;
                     pfam06624"
                     /db_xref="CDD:461965"
     CDS             1..68
                     /gene="LOC107921251"
                     /coded_by="XM_016851128.2:176..382"
                     /db_xref="GeneID:107921251"
ORIGIN      
        1 mttsrriadr kvlkfeknit krgavpetst kkgkdypvgp mllgffvfvv igsslfqiir
       61 tatsgsma
//
LOCUS       XP_016707761             466 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box only protein 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707761
VERSION     XP_016707761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..466
                     /product="F-box only protein 6 isoform X1"
                     /calculated_mol_wt=53024
     Region          119..156
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(120,124,127..128,131..132,136,138..139,143..145,147)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          183..390
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          203..242
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          248..293
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..466
                     /gene="LOC107922299"
                     /coded_by="XM_016852272.2:240..1640"
                     /db_xref="GeneID:107922299"
ORIGIN      
        1 meglamlrql igqlqdllhl ygspppplpp sspfhllhlh qlphpfydhh rrwcfpnine
       61 tsaedyyslv maagksgnck mlepfkppps krsrkernrg klpgstpase vmdqeiwkef
      121 pedlfeavia rlpiatffrf rsvcrkwnsl lesqsfshhc aeipqanpwf ytithenmnv
      181 gamydpstkk whhptisflp akmialpvas vgglvcfldi ghrnfyvcnp ltqsfkelpa
      241 rsvkvwsrva vgmtlngnst degykilwvg cdgeyevyds vknswsrpgs mpsniklpls
      301 lnfrsqaisi dstlyfmqsd pegivsynmv sgvwkqfiip apihlsdhtl aecegrimlv
      361 glltknaatc vciwelqkmt llwkevdrmp niwclefygk hvrmsclgnk glfmlslrsr
      421 qmnrlvtynv msrewmkvpg cvlprgrkrq wiacgtafhp cltata
//
LOCUS       XP_040943255             396 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box only protein 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943255
VERSION     XP_040943255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087321.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..396
                     /product="F-box only protein 6 isoform X2"
                     /calculated_mol_wt=44859
     Region          49..86
                     /region_name="F-box_AtFBW1-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/WD-40 repeat-containing protein 1 (AtFBW1) and
                     similar proteins; cd22157"
                     /db_xref="CDD:438928"
     Site            order(50,54,57..58,61..62,66,68..69,73..75,77)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438928"
     Region          113..320
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          133..172
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          178..223
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..396
                     /gene="LOC107922299"
                     /coded_by="XM_041087321.1:316..1506"
                     /db_xref="GeneID:107922299"
ORIGIN      
        1 maagksgnck mlepfkppps krsrkernrg klpgstpase vmdqeiwkef pedlfeavia
       61 rlpiatffrf rsvcrkwnsl lesqsfshhc aeipqanpwf ytithenmnv gamydpstkk
      121 whhptisflp akmialpvas vgglvcfldi ghrnfyvcnp ltqsfkelpa rsvkvwsrva
      181 vgmtlngnst degykilwvg cdgeyevyds vknswsrpgs mpsniklpls lnfrsqaisi
      241 dstlyfmqsd pegivsynmv sgvwkqfiip apihlsdhtl aecegrimlv glltknaatc
      301 vciwelqkmt llwkevdrmp niwclefygk hvrmsclgnk glfmlslrsr qmnrlvtynv
      361 msrewmkvpg cvlprgrkrq wiacgtafhp cltata
//
LOCUS       XP_040943256             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943256
VERSION     XP_040943256.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087322.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087322.1:391..1800"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943257             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943257
VERSION     XP_040943257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087323.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087323.1:345..1754"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943258             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943258
VERSION     XP_040943258.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087324.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087324.1:347..1756"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943259             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943259
VERSION     XP_040943259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087325.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087325.1:245..1654"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943260             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943260
VERSION     XP_040943260.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087326.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087326.1:318..1727"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943261             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943261
VERSION     XP_040943261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087327.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087327.1:349..1758"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943262             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943262
VERSION     XP_040943262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087328.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087328.1:366..1775"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_040943263             469 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040943263
VERSION     XP_040943263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087329.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="squamosa promoter-binding-like protein 2"
                     /calculated_mol_wt=51722
     Region          188..262
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..469
                     /gene="LOC107922243"
                     /coded_by="XM_041087329.1:648..2057"
                     /db_xref="GeneID:107922243"
ORIGIN      
        1 mssispmdwn aktplqwdwe nlmmlnatpa eiprklrpee wdidgeggin sgpfyssgaa
       61 ggsggsgsdl glaslskssk sasinsssmg evkmtkftse afeaipddis nqneafrael
      121 agtsptleas vgsgepllsl klgkqtyfed vsggsntknl sysstsgqsp aqakrskpnc
      181 qgihvprcqv edcnfdlssa kdyhrkhric eshskspkvi vrgqerrfcq qcskfhglse
      241 fdekkrscrr rlsdhnarrr kpqteafhfs gtrfssspnd gkqqmsfiwn kvpflhnarp
      301 neiftwegtf dskssqmkgy tptkvgnvng qpnlpgnqll nsitmrchds ngflpskgkq
      361 sveesrvdsn mattqdlhra lsllsneswv scepkhgsia ypvhvnpsts msqpamnais
      421 rgfpsalsen wqmeqqttes qvhnsdgdnh fqefqllkap yysgfysnq
//
LOCUS       XP_016707486             625 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707486
VERSION     XP_016707486.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851997.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..625
                     /product="YTH domain-containing protein ECT3 isoform X1"
                     /calculated_mol_wt=68314
     Region          397..535
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..625
                     /gene="LOC107922137"
                     /coded_by="XM_016851997.2:338..2215"
                     /db_xref="GeneID:107922137"
ORIGIN      
        1 mlmahqtsdr ltstdsaevf nvmvldsnil anpnaltnkd lvtvgslrdg sshqsgfmps
       61 vveskttylp nayspeaqfh qeahkqgsll pyvnaegldn gfhdiyneta slgfhgfghs
      121 pqmqqrayap vssylppvgd piglsnarhf itidssyhhp svprniphvt skaqfshlec
      181 pvnieqqvvg krfglrtnyl pqlgsfdggr nffgsssslc ssyqgsdgfa vggfcsdwsk
      241 pfsgksslfh lsyapaspkr vgslefssng pamvsfqkgp fngfgctsss srgysgsqsd
      301 qrschgsvst nslgisghnw ptlaearqgg scndfscsct vtldtlnern rgprafkpkt
      361 qittkgfivd sskngtingi tngsynrqnf vtdyegakff viksysednv hksikygiwa
      421 stpignkkld tayheakaiq gtcpvfllfs vnssaqfcgv aemvgpvdfd ksvdywlqnk
      481 wsgqfpvkwh iikdvpnsqf rhillesndn kpvtnsrdtq evefeqgiem inifknyesh
      541 ssilddfyfy eerqkamqer karqltslva sddlvceasn lvslpndivk kmsksfaevl
      601 llnenekagg gtgkvlsaac gghvr
//
LOCUS       XP_016707487             603 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707487
VERSION     XP_016707487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851998.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..603
                     /product="YTH domain-containing protein ECT3 isoform X2"
                     /calculated_mol_wt=65879
     Region          375..513
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..603
                     /gene="LOC107922137"
                     /coded_by="XM_016851998.2:524..2335"
                     /db_xref="GeneID:107922137"
ORIGIN      
        1 mvldsnilan pnaltnkdlv tvgslrdgss hqsgfmpsvv eskttylpna yspeaqfhqe
       61 ahkqgsllpy vnaegldngf hdiynetasl gfhgfghspq mqqrayapvs sylppvgdpi
      121 glsnarhfit idssyhhpsv prniphvtsk aqfshlecpv nieqqvvgkr fglrtnylpq
      181 lgsfdggrnf fgsssslcss yqgsdgfavg gfcsdwskpf sgksslfhls yapaspkrvg
      241 slefssngpa mvsfqkgpfn gfgctssssr gysgsqsdqr schgsvstns lgisghnwpt
      301 laearqggsc ndfscsctvt ldtlnernrg prafkpktqi ttkgfivdss kngtingitn
      361 gsynrqnfvt dyegakffvi ksysednvhk sikygiwast pignkkldta yheakaiqgt
      421 cpvfllfsvn ssaqfcgvae mvgpvdfdks vdywlqnkws gqfpvkwhii kdvpnsqfrh
      481 illesndnkp vtnsrdtqev efeqgiemin ifknyeshss ilddfyfyee rqkamqerka
      541 rqltslvasd dlvceasnlv slpndivkkm sksfaevlll nenekagggt gkvlsaacgg
      601 hvr
//
LOCUS       XP_040943264             593 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943264
VERSION     XP_040943264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087330.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..593
                     /product="YTH domain-containing protein ECT3 isoform X3"
                     /calculated_mol_wt=65036
     Region          365..503
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..593
                     /gene="LOC107922137"
                     /coded_by="XM_041087330.1:603..2384"
                     /db_xref="GeneID:107922137"
ORIGIN      
        1 mvhpisrdsc hlllsprqpi cpmpillrhs sikkgidihs cadwkgnlfc ahkqgsllpy
       61 vnaegldngf hdiynetasl gfhgfghspq mqqrayapvs sylppvgdpi glsnarhfit
      121 idssyhhpsv prniphvtsk aqfshlecpv nieqqvvgkr fglrtnylpq lgsfdggrnf
      181 fgsssslcss yqgsdgfavg gfcsdwskpf sgksslfhls yapaspkrvg slefssngpa
      241 mvsfqkgpfn gfgctssssr gysgsqsdqr schgsvstns lgisghnwpt laearqggsc
      301 ndfscsctvt ldtlnernrg prafkpktqi ttkgfivdss kngtingitn gsynrqnfvt
      361 dyegakffvi ksysednvhk sikygiwast pignkkldta yheakaiqgt cpvfllfsvn
      421 ssaqfcgvae mvgpvdfdks vdywlqnkws gqfpvkwhii kdvpnsqfrh illesndnkp
      481 vtnsrdtqev efeqgiemin ifknyeshss ilddfyfyee rqkamqerka rqltslvasd
      541 dlvceasnlv slpndivkkm sksfaevlll nenekagggt gkvlsaacgg hvr
//
LOCUS       XP_040943265             503 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943265
VERSION     XP_040943265.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087331.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..503
                     /product="YTH domain-containing protein ECT1 isoform X4"
                     /calculated_mol_wt=55080
     Region          275..413
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..503
                     /gene="LOC107922137"
                     /coded_by="XM_041087331.1:530..2041"
                     /db_xref="GeneID:107922137"
ORIGIN      
        1 mqqrayapvs sylppvgdpi glsnarhfit idssyhhpsv prniphvtsk aqfshlecpv
       61 nieqqvvgkr fglrtnylpq lgsfdggrnf fgsssslcss yqgsdgfavg gfcsdwskpf
      121 sgksslfhls yapaspkrvg slefssngpa mvsfqkgpfn gfgctssssr gysgsqsdqr
      181 schgsvstns lgisghnwpt laearqggsc ndfscsctvt ldtlnernrg prafkpktqi
      241 ttkgfivdss kngtingitn gsynrqnfvt dyegakffvi ksysednvhk sikygiwast
      301 pignkkldta yheakaiqgt cpvfllfsvn ssaqfcgvae mvgpvdfdks vdywlqnkws
      361 gqfpvkwhii kdvpnsqfrh illesndnkp vtnsrdtqev efeqgiemin ifknyeshss
      421 ilddfyfyee rqkamqerka rqltslvasd dlvceasnlv slpndivkkm sksfaevlll
      481 nenekagggt gkvlsaacgg hvr
//
LOCUS       XP_016707488             188 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707488
VERSION     XP_016707488.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851999.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="non-specific lipid transfer protein GPI-anchored
                     1"
                     /calculated_mol_wt=19355
     Region          38..104
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..188
                     /gene="LOC107922138"
                     /coded_by="XM_016851999.2:235..801"
                     /db_xref="GeneID:107922138"
ORIGIN      
        1 mgkgwavkvm mmslvvvvga gdesglakec skdvqsamtc lsfaqgkmek pskeccssvs
       61 sikeeepkcl cyilqqtqas gaqnlkslgv qqdkllqlps acqlknasvt dcpkllglap
      121 nspdaaiftn ssstpttpst gtpssasena dnnssgtkle tahlvgftil vasasflyal
      181 ppglaslf
//
LOCUS       XP_016706372             213 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706372
VERSION     XP_016706372.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850883.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..213
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23426
     Region          128..213
                     /region_name="DUF493"
                     /note="Protein of unknown function (DUF493); pfam04359"
                     /db_xref="CDD:461274"
     CDS             1..213
                     /gene="LOC107921030"
                     /coded_by="XM_016850883.2:760..1401"
                     /db_xref="GeneID:107921030"
ORIGIN      
        1 macmtvlrsa pvtepwrplq rngnshsvkt lrsfeistak rgcrgavvrv rnlhfwkrtq
       61 klncsdnetl psstseeddl eqgppqeavl kaisevskte grvgqttnvv iggtvaddst
      121 newlaldqkv nsyptvrgft aigtggddfv qamvvavesv iqqpipedrv rqklssrgky
      181 vsvnigpvqv vsseqvqavy namkrddrmk yfl
//
LOCUS       XP_040943266             270 aa            linear   PLN 06-AUG-2024
DEFINITION  chlorophyll a-b binding protein 7, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040943266
VERSION     XP_040943266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087332.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..270
                     /product="chlorophyll a-b binding protein 7,
                     chloroplastic"
                     /calculated_mol_wt=28889
     Region          57..268
                     /region_name="PLN00089"
                     /note="fucoxanthin-chlorophyll a/c binding protein;
                     Provisional; cl02879"
                     /db_xref="CDD:470693"
     CDS             1..270
                     /gene="LOC107922548"
                     /coded_by="XM_041087332.1:348..1160"
                     /db_xref="GeneID:107922548"
ORIGIN      
        1 masvcassai aavaisspss qktgsvvgtt kasfltgkkl rsvrkytkpa agptfpvcaa
       61 adpdrplwfp gstpppwldg slpgdfgfdp lglgsdpetl rwnvqaelvh crwamlgaag
      121 ifipefltki gilntpswys agteeyftdt ttlfivelif igwaegrrwa dilkpgcvnt
      181 dpifpnnklt gtdvgypggl wfdplgwgsg spekikelrt keikngrlam lavmgawfqh
      241 iytgtgpidn lfahladpgh atifaaftpk
//
LOCUS       XP_016706415             220 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706415
VERSION     XP_016706415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="fatty acid amide hydrolase isoform X1"
                     /calculated_mol_wt=24807
     CDS             1..220
                     /gene="LOC107921074"
                     /coded_by="XM_016850926.2:331..993"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke gnplsifivp liclsfclsd inlvklehsg
//
LOCUS       XP_016706416             220 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706416
VERSION     XP_016706416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="fatty acid amide hydrolase isoform X1"
                     /calculated_mol_wt=24807
     CDS             1..220
                     /gene="LOC107921074"
                     /coded_by="XM_016850927.2:340..1002"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke gnplsifivp liclsfclsd inlvklehsg
//
LOCUS       XP_016706417             220 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706417
VERSION     XP_016706417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="fatty acid amide hydrolase isoform X1"
                     /calculated_mol_wt=24807
     CDS             1..220
                     /gene="LOC107921074"
                     /coded_by="XM_016850928.2:316..978"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke gnplsifivp liclsfclsd inlvklehsg
//
LOCUS       XP_040943267             220 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943267
VERSION     XP_040943267.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087333.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="fatty acid amide hydrolase isoform X1"
                     /calculated_mol_wt=24807
     CDS             1..220
                     /gene="LOC107921074"
                     /coded_by="XM_041087333.1:316..978"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke gnplsifivp liclsfclsd inlvklehsg
//
LOCUS       XP_040943268             201 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943268
VERSION     XP_040943268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087334.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="fatty acid amide hydrolase isoform X2"
                     /calculated_mol_wt=22789
     CDS             1..201
                     /gene="LOC107921074"
                     /coded_by="XM_041087334.1:319..924"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke dinlvklehs g
//
LOCUS       XP_016706418             201 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706418
VERSION     XP_016706418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="fatty acid amide hydrolase isoform X2"
                     /calculated_mol_wt=22789
     CDS             1..201
                     /gene="LOC107921074"
                     /coded_by="XM_016850929.2:319..924"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke dinlvklehs g
//
LOCUS       XP_040943269             201 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943269
VERSION     XP_040943269.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087335.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="fatty acid amide hydrolase isoform X2"
                     /calculated_mol_wt=22789
     CDS             1..201
                     /gene="LOC107921074"
                     /coded_by="XM_041087335.1:316..921"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke dinlvklehs g
//
LOCUS       XP_016706419             201 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706419
VERSION     XP_016706419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850930.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="fatty acid amide hydrolase isoform X2"
                     /calculated_mol_wt=22789
     CDS             1..201
                     /gene="LOC107921074"
                     /coded_by="XM_016850930.2:316..921"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke dinlvklehs g
//
LOCUS       XP_016706421             201 aa            linear   PLN 06-AUG-2024
DEFINITION  fatty acid amide hydrolase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706421
VERSION     XP_016706421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="fatty acid amide hydrolase isoform X2"
                     /calculated_mol_wt=22789
     CDS             1..201
                     /gene="LOC107921074"
                     /coded_by="XM_016850932.2:316..921"
                     /db_xref="GeneID:107921074"
ORIGIN      
        1 mgkkrvmvpa keldlltvky eketiqaphl tgsilklfvr iieipiigsl iisfmkkenn
       61 mvemlqntei pekpmfkpef ppqeaepsvv ivdeegkptd rvesalkclp hydpascwsg
      121 dtlpsfrywk irdfayayrs klvtpskiae qiitlvegck yhkaptplli sfdaedirkq
      181 atastqrfke dinlvklehs g
//
LOCUS       XP_016706221             390 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g67340 [Gossypium hirsutum].
ACCESSION   XP_016706221
VERSION     XP_016706221.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850732.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706221.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="F-box protein At1g67340"
                     /calculated_mol_wt=42331
     Region          50..94
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          <112..229
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          112..138
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          143..172
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          182..211
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          316..360
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..390
                     /gene="LOC107920907"
                     /coded_by="XM_016850732.2:729..1901"
                     /db_xref="GeneID:107920907"
ORIGIN      
        1 mrtrrgisyp rahvclddiv ferrdfagdn macrkrrrls pgiagkrdff dvlpddlvis
       61 ifsklsstaa cpsdfanvli vckrlnslav rplvlskasp kmfaikaksw sesahrflkn
      121 cadagnveac ytlgmilfyc lenresgasl makaaissha palyslaviq fngsggsknd
      181 kdlragvalc araaflghid alrelghclq dgygvrqnva kgrrflvqan arelatvlss
      241 aaasnnftrs wltwsphpip hpnprhnhrh qavpgcplls dfgcnvpape ahpsskflae
      301 wfgarggipg pglrlcshvg cgrpetrkhe frrcsvcgav nycsracqal dwklrhkaec
      361 apverwldee gdggegngag hgnvdviaes
//
LOCUS       XP_040943270             390 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g67340 [Gossypium hirsutum].
ACCESSION   XP_040943270
VERSION     XP_040943270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087336.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="F-box protein At1g67340"
                     /calculated_mol_wt=42331
     Region          50..94
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          <112..229
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          112..138
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          143..172
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          182..211
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          316..360
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..390
                     /gene="LOC107920907"
                     /coded_by="XM_041087336.1:334..1506"
                     /db_xref="GeneID:107920907"
ORIGIN      
        1 mrtrrgisyp rahvclddiv ferrdfagdn macrkrrrls pgiagkrdff dvlpddlvis
       61 ifsklsstaa cpsdfanvli vckrlnslav rplvlskasp kmfaikaksw sesahrflkn
      121 cadagnveac ytlgmilfyc lenresgasl makaaissha palyslaviq fngsggsknd
      181 kdlragvalc araaflghid alrelghclq dgygvrqnva kgrrflvqan arelatvlss
      241 aaasnnftrs wltwsphpip hpnprhnhrh qavpgcplls dfgcnvpape ahpsskflae
      301 wfgarggipg pglrlcshvg cgrpetrkhe frrcsvcgav nycsracqal dwklrhkaec
      361 apverwldee gdggegngag hgnvdviaes
//
LOCUS       XP_016706222             390 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g67340 [Gossypium hirsutum].
ACCESSION   XP_016706222
VERSION     XP_016706222.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850733.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706222.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="F-box protein At1g67340"
                     /calculated_mol_wt=42331
     Region          50..94
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          <112..229
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          112..138
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          143..172
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          182..211
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          316..360
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..390
                     /gene="LOC107920907"
                     /coded_by="XM_016850733.2:327..1499"
                     /db_xref="GeneID:107920907"
ORIGIN      
        1 mrtrrgisyp rahvclddiv ferrdfagdn macrkrrrls pgiagkrdff dvlpddlvis
       61 ifsklsstaa cpsdfanvli vckrlnslav rplvlskasp kmfaikaksw sesahrflkn
      121 cadagnveac ytlgmilfyc lenresgasl makaaissha palyslaviq fngsggsknd
      181 kdlragvalc araaflghid alrelghclq dgygvrqnva kgrrflvqan arelatvlss
      241 aaasnnftrs wltwsphpip hpnprhnhrh qavpgcplls dfgcnvpape ahpsskflae
      301 wfgarggipg pglrlcshvg cgrpetrkhe frrcsvcgav nycsracqal dwklrhkaec
      361 apverwldee gdggegngag hgnvdviaes
//
LOCUS       XP_016708153             262 aa            linear   PLN 06-AUG-2024
DEFINITION  REF/SRPP-like protein At1g67360 [Gossypium hirsutum].
ACCESSION   XP_016708153
VERSION     XP_016708153.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852664.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708153.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="REF/SRPP-like protein At1g67360"
                     /calculated_mol_wt=28265
     Region          14..209
                     /region_name="REF"
                     /note="Rubber elongation factor protein (REF); pfam05755"
                     /db_xref="CDD:461731"
     CDS             1..262
                     /gene="LOC107922575"
                     /coded_by="XM_016852664.2:212..1000"
                     /db_xref="GeneID:107922575"
ORIGIN      
        1 mekevefekk khalkhiafv rvaairtlvy vsnlygyakq nsgplrstvg tvegavaaiv
       61 gpvyekykdv pdhllvflds kvdeasqkyd ehvppagkqm vnqakdlahm aaqkahklid
      121 eartngarga lhyaateykq lvlvsstkvw vklnrssafq svaekivpta snlsdkyncl
      181 vkdmsgkgyp vfaylplipv gelrkavkqa eakekarvta dtrksdsdsg sgsasgsdsd
      241 sdslalfyga aaqakdmvkl ss
//
LOCUS       XP_016741013             440 aa            linear   PLN 06-AUG-2024
DEFINITION  CTD small phosphatase-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016741013
VERSION     XP_016741013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885524.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..440
                     /product="CTD small phosphatase-like protein 2"
                     /calculated_mol_wt=48937
     Region          258..400
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(262..266,270..271,317..320,324,357,373..374,
                     376..378)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..440
                     /gene="LOC107950642"
                     /coded_by="XM_016885524.2:262..1584"
                     /db_xref="GeneID:107950642"
ORIGIN      
        1 mqtkkrisgr nasrdhtspk asraekkise kvqgpekkvt elitssvrkq kparafpkkn
       61 evpdgatnln aryglshdda sdaclgfdvv ngahvdqkgt dhhmsgtifs pgfhiskicg
      121 seiagadski hqdrgiedsq vdllganitg etlkstseae mlvvdtdpvi ctadsgavls
      181 sevsaiylam knsklecide ygqdsmstdv cvedeyyeef ddfdpylfmk nlpelssvip
      241 afrpvllpkq trscppttlv ldldetlvhs slepcddadf tfpvnfnlqe htvyvrcrph
      301 lrdfmervsg lfeiviftas qsiyaeqlln vldpkrrvfr hrvfrescvf vdgnylkdls
      361 vlgrdlarvi iidnspqafg fqvdngipie swfddrsdqe lllllpfles lvgvedvrpa
      421 iakkfnlrek iaaavyplqi
//
LOCUS       XP_016741014             440 aa            linear   PLN 06-AUG-2024
DEFINITION  CTD small phosphatase-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016741014
VERSION     XP_016741014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885525.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..440
                     /product="CTD small phosphatase-like protein 2"
                     /calculated_mol_wt=48937
     Region          258..400
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(262..266,270..271,317..320,324,357,373..374,
                     376..378)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..440
                     /gene="LOC107950642"
                     /coded_by="XM_016885525.2:390..1712"
                     /db_xref="GeneID:107950642"
ORIGIN      
        1 mqtkkrisgr nasrdhtspk asraekkise kvqgpekkvt elitssvrkq kparafpkkn
       61 evpdgatnln aryglshdda sdaclgfdvv ngahvdqkgt dhhmsgtifs pgfhiskicg
      121 seiagadski hqdrgiedsq vdllganitg etlkstseae mlvvdtdpvi ctadsgavls
      181 sevsaiylam knsklecide ygqdsmstdv cvedeyyeef ddfdpylfmk nlpelssvip
      241 afrpvllpkq trscppttlv ldldetlvhs slepcddadf tfpvnfnlqe htvyvrcrph
      301 lrdfmervsg lfeiviftas qsiyaeqlln vldpkrrvfr hrvfrescvf vdgnylkdls
      361 vlgrdlarvi iidnspqafg fqvdngipie swfddrsdqe lllllpfles lvgvedvrpa
      421 iakkfnlrek iaaavyplqi
//
LOCUS       XP_016741015             440 aa            linear   PLN 06-AUG-2024
DEFINITION  CTD small phosphatase-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016741015
VERSION     XP_016741015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016885526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..440
                     /product="CTD small phosphatase-like protein 2"
                     /calculated_mol_wt=48937
     Region          258..400
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(262..266,270..271,317..320,324,357,373..374,
                     376..378)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..440
                     /gene="LOC107950642"
                     /coded_by="XM_016885526.2:259..1581"
                     /db_xref="GeneID:107950642"
ORIGIN      
        1 mqtkkrisgr nasrdhtspk asraekkise kvqgpekkvt elitssvrkq kparafpkkn
       61 evpdgatnln aryglshdda sdaclgfdvv ngahvdqkgt dhhmsgtifs pgfhiskicg
      121 seiagadski hqdrgiedsq vdllganitg etlkstseae mlvvdtdpvi ctadsgavls
      181 sevsaiylam knsklecide ygqdsmstdv cvedeyyeef ddfdpylfmk nlpelssvip
      241 afrpvllpkq trscppttlv ldldetlvhs slepcddadf tfpvnfnlqe htvyvrcrph
      301 lrdfmervsg lfeiviftas qsiyaeqlln vldpkrrvfr hrvfrescvf vdgnylkdls
      361 vlgrdlarvi iidnspqafg fqvdngipie swfddrsdqe lllllpfles lvgvedvrpa
      421 iakkfnlrek iaaavyplqi
//
LOCUS       XP_040943271             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943271
VERSION     XP_040943271.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087337.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..162
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=18566
     Region          <100..141
                     /region_name="E1_enzyme_family"
                     /note="Superfamily of activating enzymes (E1) of the
                     ubiquitin-like proteins. This family includes classical
                     ubiquitin-activating enzymes E1, ubiquitin-like (ubl)
                     activating enzymes and other mechanistic homologes, like
                     MoeB, Thif1 and others. The common...; cl22428"
                     /db_xref="CDD:451392"
     CDS             1..162
                     /gene="LOC107921022"
                     /coded_by="XM_041087337.1:246..734"
                     /db_xref="GeneID:107921022"
ORIGIN      
        1 mplgkyyydy cdkqfqdtpa trkhhlqglq lfsqlpyfll fihmfvivdl yqtsvppflk
       61 gvcnrflntd fasteitvnt siptmilgpq ilhfqlhhql rhclrkdhgi eggipvvfsl
      121 ekpkakllpf rgpsgeednp sdyqvrmlas yfssfkvlcl it
//
LOCUS       XP_040943273             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943273
VERSION     XP_040943273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087339.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=13069
     Region          <55..96
                     /region_name="E1_enzyme_family"
                     /note="Superfamily of activating enzymes (E1) of the
                     ubiquitin-like proteins. This family includes classical
                     ubiquitin-activating enzymes E1, ubiquitin-like (ubl)
                     activating enzymes and other mechanistic homologes, like
                     MoeB, Thif1 and others. The common...; cl22428"
                     /db_xref="CDD:451392"
     CDS             1..117
                     /gene="LOC107921022"
                     /coded_by="XM_041087339.1:246..599"
                     /db_xref="GeneID:107921022"
ORIGIN      
        1 mpldlyqtsv ppflkgvcnr flntdfaste itvntsiptm ilgpqilhfq lhhqlrhclr
       61 kdhgieggip vvfslekpka kllpfrgpsg eednpsdyqv rmlasyfssf kvlclit
//
LOCUS       XP_016708133             432 aa            linear   PLN 06-AUG-2024
DEFINITION  probable arabinosyltransferase ARAD1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016708133
VERSION     XP_016708133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852644.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..432
                     /product="probable arabinosyltransferase ARAD1 isoform X1"
                     /calculated_mol_wt=49834
     Region          48..364
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..432
                     /gene="LOC107922558"
                     /coded_by="XM_016852644.2:260..1558"
                     /db_xref="GeneID:107922558"
ORIGIN      
        1 mygkaaicls fvilfliscs iyvgtvdlrs yffpllqspq vprslcasgp plrvymydlp
       61 rkfhvgmmdr rsfegpapvt adnlppwpsn sgikkqhsve ywlmasllyg gngnedreav
      121 rvsdpesaes ffvpffssls fnthghnmtd petevdrrlq velleflqks kyyqrsggrd
      181 hvipmthpna frflrqelna silivvdfgr ypktmsslsk dvvapyvhvv dsftdddald
      241 pyesrttllf frgntvrkdq gkiriklaki lsgiddvhye ksvatpknii mstegmrssk
      301 fclhpagdtp sscrlfdaiv shcvpvivsd kielpyedei dysefsiffs mkealepgyl
      361 vnqlrqfpkd rwvemwkqlk nishhfefqy ppkkedgvnm lwrqvkrklp raqlaihrsr
      421 rlkvpdwwqr rr
//
LOCUS       XP_016708134             377 aa            linear   PLN 06-AUG-2024
DEFINITION  probable arabinosyltransferase ARAD1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016708134
VERSION     XP_016708134.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852645.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="probable arabinosyltransferase ARAD1 isoform X2"
                     /calculated_mol_wt=43750
     Region          1..309
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..377
                     /gene="LOC107922558"
                     /coded_by="XM_016852645.2:316..1449"
                     /db_xref="GeneID:107922558"
ORIGIN      
        1 mydlprkfhv gmmdrrsfeg papvtadnlp pwpsnsgikk qhsveywlma sllyggngne
       61 dreavrvsdp esaesffvpf fsslsfnthg hnmtdpetev drrlqvelle flqkskyyqr
      121 sggrdhvipm thpnafrflr qelnasiliv vdfgrypktm sslskdvvap yvhvvdsftd
      181 ddaldpyesr ttllffrgnt vrkdqgkiri klakilsgid dvhyeksvat pkniimsteg
      241 mrsskfclhp agdtpsscrl fdaivshcvp vivsdkielp yedeidysef siffsmkeal
      301 epgylvnqlr qfpkdrwvem wkqlknishh fefqyppkke dgvnmlwrqv krklpraqla
      361 ihrsrrlkvp dwwqrrr
//
LOCUS       XP_016707251             756 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat domain-containing protein 50 [Gossypium hirsutum].
ACCESSION   XP_016707251
VERSION     XP_016707251.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851762.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707251.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..756
                     /product="ankyrin repeat domain-containing protein 50"
                     /calculated_mol_wt=82201
     Region          <60..254
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          86..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(89..90,93..95,97..98,102,105,114,116,118,125..127,
                     129..130,134,137,146,155,157,180..181,184..186,188..189,
                     193,196,205)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..146
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          155..205
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          291..>534
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          308..340
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          342..375
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          377..408
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          410..479
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          430..642
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(481,483,487..488,491..493,495..496,500,503,512,514,
                     516,553..554,557..559,561..562,566,569,578,580,582,
                     586..587,590..592,594..595,599,602,611)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          481..512
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          514..578
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          580..611
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..756
                     /gene="LOC107921967"
                     /coded_by="XM_016851762.2:175..2445"
                     /db_xref="GeneID:107921967"
ORIGIN      
        1 mtvvhggsrg glvfpinyee evsqrlvdal hgndlklase cladpfvdvn figtvslksk
       61 kteillheea ahqvlvdyee fktevtplfl aahvgnmflv kkllslganv dhklfrgyat
      121 taatreghmd vlevllnaga cqaaceeall essylgyakl akrlmatdmi rpqaalrafv
      181 saccrgfvdv vdmlikcgvd anatdrlllr sskpslytni dcnalsatvi crqtsivrsl
      241 lqagikmdlk vrvgawswdi dtgeetrvga gladaysitw caveyfevsg silrlllrhi
      301 spnslhcgrt lihhailckn asavevllnc gadiefpvkt tsktalrpih lsaklgfvev
      361 lqclivggcd idsrtafgds almicarykh gdclkvlasa gadfglvnsa gqsassiagl
      421 arwnhgfqqa vqdvilagkt pqssnpsvfs plmftvhgne iealkkllek advdlheqdd
      481 dgnsalmiaa seghleafel llraganikl snkygdtais llelnqkgdv fdqlmleyal
      541 edangpigfy alhravkrgd lnlvhiltsr gydvnafdad gytplmlaar ggyggvcell
      601 iscgakcnie narhetalll arkkgygnda eniilnelar alvvdgsqvk khtrggkgsp
      661 hskvlrmmet rgilrwgkss rrnvickaad vgpsekfrwn rrrkfdvees gmfhvvttkn
      721 kevhfvcdgg iqmaelwvrg irlvtseaif gkqkql
//
LOCUS       XP_016707744            1010 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707744
VERSION     XP_016707744.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852255.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1010
                     /product="uncharacterized protein"
                     /calculated_mol_wt=110974
     Region          11..155
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     CDS             1..1010
                     /gene="LOC107922288"
                     /coded_by="XM_016852255.2:413..3445"
                     /db_xref="GeneID:107922288"
ORIGIN      
        1 mvlglrtknr kgnsyqvyyi vcvkeinpwt plqslpaaqs lllqwengdk nsgssvssfr
       61 ngkiefgesf rlqvtlsles srkstnrdgf qknclefyly eprkdkvakg qllgsavvnl
      121 adygiireti sistpinlkk ssrnieqpvl yltiqpfdkg sssssskgsl pkevslekdg
      181 sesvtgsine gndeeteias ftddgddgls shssrtvsss vfdssreshs qhekiglela
      241 nggigrlgls lpsdgtsans gvspaveafk qvngntshls smylssnpen pvshpmgkvs
      301 sseacvavpv dvnlnhvkdk dshskregar kawrhdqchv nrhlssnsrv ghwkgnaeks
      361 pwedeldnqi lgpeeyslqd rlgfrppqds trkqvalrsn tfassstate vkggflandr
      421 qkrvtpvqlh vdkgtsngls kiqfmekake nyipektsng ttsdilgare etansfsnrk
      481 vdsgnsygll kktefakkak endipekihc gstsdtcnks kentksfsns kveleskiem
      541 leeelreaav veaslysvva ehgsstnkvh aparrlsrfy lhackantqd krasaaraai
      601 sglvlvskac gndvprltfw lsnsivlrat vshaigemql fsegsddwvd pqtfllalqk
      661 feawifsriv esvwwqtltp ymqsaaakss cskknssrry glgdqeqgsf svelwkkafk
      721 dacerlcpir acghecgcla vlaklvmeql vgrldvamfn ailresaeem ptdpvsdpis
      781 dskvlpipas kssfgagvql knaignwsrw ltdlfgiddn espedsnevg dcknaacegs
      841 fksfcllnal sdlmmlpsem ladrstrkev spkfsvslii rvlndfvpde fnpnpvsqav
      901 fealekdlse ggeesitnfp cmatpivysp psatsltnii gsqvmersks lvlrksytsd
      961 deldeldspm tsimienprs spktnwmrtg kggrkvvrye lireiwkdge
//
LOCUS       XP_016707745             159 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016707745
VERSION     XP_016707745.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852256.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707745.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X1"
                     /calculated_mol_wt=18461
     Region          11..143
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(19,75,78,85..88,117,119,134,138..140)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..159
                     /gene="LOC107922289"
                     /coded_by="XM_016852256.2:202..681"
                     /db_xref="GeneID:107922289"
ORIGIN      
        1 mkrmpkqetw igipgdgrcl frsvihgawl rsgkqspses cqkdladelr dkvvdefikr
       61 radtewfleg dfdnyvvqmr qphiwggepe llmcshvlqt pitvymrdkn tvtlkiisey
      121 gqeygkenpi kvlyhgyghy evlmspensa sckprwkkr
//
LOCUS       XP_016707746             158 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016707746
VERSION     XP_016707746.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852257.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707746.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..158
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X2"
                     /calculated_mol_wt=18305
     Region          11..143
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(19,75,78,85..88,117,119,134,138..140)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..158
                     /gene="LOC107922289"
                     /coded_by="XM_016852257.2:204..680"
                     /db_xref="GeneID:107922289"
ORIGIN      
        1 mkrmpkqetw igipgdgrcl frsvihgawl rsgkqspses cqkdladelr dkvvdefikr
       61 radtewfleg dfdnyvvqmr qphiwggepe llmcshvlqt pitvymrdkn tvtlkiisey
      121 gqeygkenpi kvlyhgyghy evlmspensa sckpwkkr
//
LOCUS       XP_016707747             153 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X3 [Gossypium hirsutum].
ACCESSION   XP_016707747
VERSION     XP_016707747.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852258.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707747.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..153
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X3"
                     /calculated_mol_wt=17625
     Region          6..137
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(13,69,72,79..82,111,113,128,132..134)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..153
                     /gene="LOC107922289"
                     /coded_by="XM_016852258.2:122..583"
                     /db_xref="GeneID:107922289"
ORIGIN      
        1 mefgegipgd grclfrsvih gawlrsgkqs psescqkdla delrdkvvde fikrradtew
       61 flegdfdnyv vqmrqphiwg gepellmcsh vlqtpitvym rdkntvtlki iseygqeygk
      121 enpikvlyhg yghyevlmsp ensasckprw kkr
//
LOCUS       XP_040943274             152 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X4 [Gossypium hirsutum].
ACCESSION   XP_040943274
VERSION     XP_040943274.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087340.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..152
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X4"
                     /calculated_mol_wt=17469
     Region          6..137
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(13,69,72,79..82,111,113,128,132..134)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..152
                     /gene="LOC107922289"
                     /coded_by="XM_041087340.1:125..583"
                     /db_xref="GeneID:107922289"
ORIGIN      
        1 mefgegipgd grclfrsvih gawlrsgkqs psescqkdla delrdkvvde fikrradtew
       61 flegdfdnyv vqmrqphiwg gepellmcsh vlqtpitvym rdkntvtlki iseygqeygk
      121 enpikvlyhg yghyevlmsp ensasckpwk kr
//
LOCUS       XP_016708173             775 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016708173
VERSION     XP_016708173.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852684.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..775
                     /product="U-box domain-containing protein 6"
                     /calculated_mol_wt=85584
     Region          <27..114
                     /region_name="TGF_beta_SF"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in TGF-beta superfamily; cl40434"
                     /db_xref="CDD:477357"
     Site            order(28..32,70..74,77,105..107)
                     /site_type="other"
                     /note="homodimer interface 1 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Site            order(70..71,73,102,105..106)
                     /site_type="other"
                     /note="homodimer interface 2 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Region          279..331
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(280,283,285..288,307,311,320)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(493,497,501,536,541,575,579,583)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          510..544
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          549..584
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..775
                     /gene="LOC107922584"
                     /coded_by="XM_016852684.2:516..2843"
                     /db_xref="GeneID:107922584"
ORIGIN      
        1 mdnveveenl fsisdaklhg emckklsaiy ckvssifpsl eaarpasksg iqalcslhla
       61 lekaknvlqh cstcsklyla itgdsvllkf qrakcalids lkrvedmvpq sigcqileiv
      121 selegtvfsl dlfekqvgde iitllqngrk feecndtnel esfhqaasrl gisssraalt
      181 erralkkvie rarmeedkrk esivayllhl mrkysklfrs evsdddsqgs tpcsptvlgs
      241 ledggsggsg cafewqlskl nsfnfkpnir rsgqiplppe elrcpislql myepvviasg
      301 qtyericiek wfsdghdtcp ktqqklphls ltpnycvkgl iaswceqngv pipdapqesl
      361 dlnywrlals asetansrsm dnvgscnfke akvvsleksg tikevevnes enesqcpqee
      421 vseinvlery qeflsvlnee enlmesckvv eqirlllkdd eearifmgan gfvegllrfl
      481 esavregnam aqeigamalf nlavnnnrnk elmlaagvir llesmisnsn aheaatalyl
      541 nlscleqaks iigsskavlf lvqllghetd aqckldalht lynlstdhsn ilnllsagiv
      601 nhlqslvvsg dhtwteksit vlinltsset akeemvsasd litglasvld agkpieqeqa
      661 vscllllcng nekcsqivlq egvipalvsm svngttrgre msqrllmlfr eqrqrdhppa
      721 nvnqivless qdptpalasa peskplcksi srrkggkalr lgflwkikny ivyqr
//
LOCUS       XP_016708175             775 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016708175
VERSION     XP_016708175.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852686.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..775
                     /product="U-box domain-containing protein 6"
                     /calculated_mol_wt=85584
     Region          <27..114
                     /region_name="TGF_beta_SF"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in TGF-beta superfamily; cl40434"
                     /db_xref="CDD:477357"
     Site            order(28..32,70..74,77,105..107)
                     /site_type="other"
                     /note="homodimer interface 1 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Site            order(70..71,73,102,105..106)
                     /site_type="other"
                     /note="homodimer interface 2 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Region          279..331
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(280,283,285..288,307,311,320)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(493,497,501,536,541,575,579,583)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          510..544
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          549..584
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..775
                     /gene="LOC107922584"
                     /coded_by="XM_016852686.2:404..2731"
                     /db_xref="GeneID:107922584"
ORIGIN      
        1 mdnveveenl fsisdaklhg emckklsaiy ckvssifpsl eaarpasksg iqalcslhla
       61 lekaknvlqh cstcsklyla itgdsvllkf qrakcalids lkrvedmvpq sigcqileiv
      121 selegtvfsl dlfekqvgde iitllqngrk feecndtnel esfhqaasrl gisssraalt
      181 erralkkvie rarmeedkrk esivayllhl mrkysklfrs evsdddsqgs tpcsptvlgs
      241 ledggsggsg cafewqlskl nsfnfkpnir rsgqiplppe elrcpislql myepvviasg
      301 qtyericiek wfsdghdtcp ktqqklphls ltpnycvkgl iaswceqngv pipdapqesl
      361 dlnywrlals asetansrsm dnvgscnfke akvvsleksg tikevevnes enesqcpqee
      421 vseinvlery qeflsvlnee enlmesckvv eqirlllkdd eearifmgan gfvegllrfl
      481 esavregnam aqeigamalf nlavnnnrnk elmlaagvir llesmisnsn aheaatalyl
      541 nlscleqaks iigsskavlf lvqllghetd aqckldalht lynlstdhsn ilnllsagiv
      601 nhlqslvvsg dhtwteksit vlinltsset akeemvsasd litglasvld agkpieqeqa
      661 vscllllcng nekcsqivlq egvipalvsm svngttrgre msqrllmlfr eqrqrdhppa
      721 nvnqivless qdptpalasa peskplcksi srrkggkalr lgflwkikny ivyqr
//
LOCUS       XP_016708174             775 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016708174
VERSION     XP_016708174.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852685.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..775
                     /product="U-box domain-containing protein 6"
                     /calculated_mol_wt=85584
     Region          <27..114
                     /region_name="TGF_beta_SF"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in TGF-beta superfamily; cl40434"
                     /db_xref="CDD:477357"
     Site            order(28..32,70..74,77,105..107)
                     /site_type="other"
                     /note="homodimer interface 1 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Site            order(70..71,73,102,105..106)
                     /site_type="other"
                     /note="homodimer interface 2 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Region          279..331
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(280,283,285..288,307,311,320)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(493,497,501,536,541,575,579,583)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          510..544
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          549..584
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..775
                     /gene="LOC107922584"
                     /coded_by="XM_016852685.2:403..2730"
                     /db_xref="GeneID:107922584"
ORIGIN      
        1 mdnveveenl fsisdaklhg emckklsaiy ckvssifpsl eaarpasksg iqalcslhla
       61 lekaknvlqh cstcsklyla itgdsvllkf qrakcalids lkrvedmvpq sigcqileiv
      121 selegtvfsl dlfekqvgde iitllqngrk feecndtnel esfhqaasrl gisssraalt
      181 erralkkvie rarmeedkrk esivayllhl mrkysklfrs evsdddsqgs tpcsptvlgs
      241 ledggsggsg cafewqlskl nsfnfkpnir rsgqiplppe elrcpislql myepvviasg
      301 qtyericiek wfsdghdtcp ktqqklphls ltpnycvkgl iaswceqngv pipdapqesl
      361 dlnywrlals asetansrsm dnvgscnfke akvvsleksg tikevevnes enesqcpqee
      421 vseinvlery qeflsvlnee enlmesckvv eqirlllkdd eearifmgan gfvegllrfl
      481 esavregnam aqeigamalf nlavnnnrnk elmlaagvir llesmisnsn aheaatalyl
      541 nlscleqaks iigsskavlf lvqllghetd aqckldalht lynlstdhsn ilnllsagiv
      601 nhlqslvvsg dhtwteksit vlinltsset akeemvsasd litglasvld agkpieqeqa
      661 vscllllcng nekcsqivlq egvipalvsm svngttrgre msqrllmlfr eqrqrdhppa
      721 nvnqivless qdptpalasa peskplcksi srrkggkalr lgflwkikny ivyqr
//
LOCUS       XP_040943275             775 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_040943275
VERSION     XP_040943275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087341.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..775
                     /product="U-box domain-containing protein 6"
                     /calculated_mol_wt=85584
     Region          <27..114
                     /region_name="TGF_beta_SF"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in TGF-beta superfamily; cl40434"
                     /db_xref="CDD:477357"
     Site            order(28..32,70..74,77,105..107)
                     /site_type="other"
                     /note="homodimer interface 1 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Site            order(70..71,73,102,105..106)
                     /site_type="other"
                     /note="homodimer interface 2 [polypeptide binding]"
                     /db_xref="CDD:381643"
     Region          279..331
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(280,283,285..288,307,311,320)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Site            order(493,497,501,536,541,575,579,583)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          510..544
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          549..584
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..775
                     /gene="LOC107922584"
                     /coded_by="XM_041087341.1:515..2842"
                     /db_xref="GeneID:107922584"
ORIGIN      
        1 mdnveveenl fsisdaklhg emckklsaiy ckvssifpsl eaarpasksg iqalcslhla
       61 lekaknvlqh cstcsklyla itgdsvllkf qrakcalids lkrvedmvpq sigcqileiv
      121 selegtvfsl dlfekqvgde iitllqngrk feecndtnel esfhqaasrl gisssraalt
      181 erralkkvie rarmeedkrk esivayllhl mrkysklfrs evsdddsqgs tpcsptvlgs
      241 ledggsggsg cafewqlskl nsfnfkpnir rsgqiplppe elrcpislql myepvviasg
      301 qtyericiek wfsdghdtcp ktqqklphls ltpnycvkgl iaswceqngv pipdapqesl
      361 dlnywrlals asetansrsm dnvgscnfke akvvsleksg tikevevnes enesqcpqee
      421 vseinvlery qeflsvlnee enlmesckvv eqirlllkdd eearifmgan gfvegllrfl
      481 esavregnam aqeigamalf nlavnnnrnk elmlaagvir llesmisnsn aheaatalyl
      541 nlscleqaks iigsskavlf lvqllghetd aqckldalht lynlstdhsn ilnllsagiv
      601 nhlqslvvsg dhtwteksit vlinltsset akeemvsasd litglasvld agkpieqeqa
      661 vscllllcng nekcsqivlq egvipalvsm svngttrgre msqrllmlfr eqrqrdhppa
      721 nvnqivless qdptpalasa peskplcksi srrkggkalr lgflwkikny ivyqr
//
LOCUS       XP_016706777             514 aa            linear   PLN 06-AUG-2024
DEFINITION  AAA-ATPase At3g50940 [Gossypium hirsutum].
ACCESSION   XP_016706777
VERSION     XP_016706777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851288.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="AAA-ATPase At3g50940"
                     /calculated_mol_wt=58176
     Region          59..152
                     /region_name="AAA_assoc"
                     /note="Domain associated at C-terminal with AAA;
                     pfam14363"
                     /db_xref="CDD:464152"
     Region          242..396
                     /region_name="RecA-like_BCS1"
                     /note="Mitochondrial chaperone BCS1; cd19510"
                     /db_xref="CDD:410918"
     Site            order(272,274,276..278,323)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410918"
     CDS             1..514
                     /gene="LOC107921436"
                     /coded_by="XM_016851288.2:86..1630"
                     /db_xref="GeneID:107921436"
ORIGIN      
        1 mkllfsafqi tqkkvskmfs lknipstssi lstyttftas amlirsmate vqaiinqlip
       61 eqlrnlllsk lgglysnpss qmtllindyd gysinelyea shtylqtkit psmkrlkvsk
      121 aprdkkvivn ihkgqkvvdm yegiqvkwem tcvdtkddeq gkveirvlel sfhnkfmetv
      181 insylpyvte rskaikeenk avklfslgnf cgdydgawgs tnldhpatfd klamdpavkk
      241 elvddldrfv rrrdyykrvg kawkrgylly gppgtgkssl iaaianylkf diydleltsv
      301 ssnsqlrgll vstrnrsmlv iedidcsiel qnrqagpggy gqgtndeltl sgllnfidgl
      361 wsscgderii vfttnhkeki dpallrpgrm dmhihmsyct psafrvlasn ylcitnhdlf
      421 neidqlmlev evtpaqvaee lmksedtdia lqglinflrd rklksencns ggreadleeq
      481 neskarervc aidkigkink kpkrkrkygn krkn
//
LOCUS       XP_016707863             332 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707863
VERSION     XP_016707863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852374.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..332
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=37817
     Region          103..>210
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Region          164..235
                     /region_name="DUF220"
                     /note="Domain of unknown function DUF220; pfam02713"
                     /db_xref="CDD:460660"
     CDS             1..332
                     /gene="LOC107922372"
                     /coded_by="XM_016852374.2:145..1143"
                     /db_xref="GeneID:107922372"
ORIGIN      
        1 mdltgemqgk ngksklldqa fsaffvqlpn klqnhlksqf kglakdndgf esansfleke
       61 kgsfaglrid lgkqlqawre npswvnqppe ikvsvpkgsl cnlkakldvg lppdavydil
      121 tdpdskrifk nikevisrkv lvdegqrqvv eveqaalwrf lwwsgtisvr vlvdqnredh
      181 smkfeqvntg fmkkfegqwr iepifvdeet cfpfkpktla eycscsegkg rigskvsldq
      241 lvqpaivppp piswylrgit akttemlihd lvaeadrltg grrsdsktss kefrlskeln
      301 eydpvkqifn ikqrwslhrr nakqhrkkll sv
//
LOCUS       XP_040943276             329 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943276
VERSION     XP_040943276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087342.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=37487
     Region          100..>207
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Region          161..232
                     /region_name="DUF220"
                     /note="Domain of unknown function DUF220; pfam02713"
                     /db_xref="CDD:460660"
     CDS             1..329
                     /gene="LOC107922372"
                     /coded_by="XM_041087342.1:112..1101"
                     /db_xref="GeneID:107922372"
ORIGIN      
        1 mgemqgkngk sklldqafsa ffvqlpnklq nhlksqfkgl akdndgfesa nsflekekgs
       61 faglridlgk qlqawrenps wvnqppeikv svpkgslcnl kakldvglpp davydiltdp
      121 dskrifknik evisrkvlvd egqrqvveve qaalwrflww sgtisvrvlv dqnredhsmk
      181 feqvntgfmk kfegqwriep ifvdeetcfp fkpktlaeyc scsegkgrig skvsldqlvq
      241 paivppppis wylrgitakt temlihdlva eadrltggrr sdsktsskef rlskelneyd
      301 pvkqifnikq rwslhrrnak qhrkkllsv
//
LOCUS       XP_040943277             326 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943277
VERSION     XP_040943277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087343.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..326
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=37170
     Region          97..>204
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Region          158..229
                     /region_name="DUF220"
                     /note="Domain of unknown function DUF220; pfam02713"
                     /db_xref="CDD:460660"
     CDS             1..326
                     /gene="LOC107922372"
                     /coded_by="XM_041087343.1:353..1333"
                     /db_xref="GeneID:107922372"
ORIGIN      
        1 mqgkngkskl ldqafsaffv qlpnklqnhl ksqfkglakd ndgfesansf lekekgsfag
       61 lridlgkqlq awrenpswvn qppeikvsvp kgslcnlkak ldvglppdav ydiltdpdsk
      121 rifknikevi srkvlvdegq rqvveveqaa lwrflwwsgt isvrvlvdqn redhsmkfeq
      181 vntgfmkkfe gqwriepifv deetcfpfkp ktlaeycscs egkgrigskv sldqlvqpai
      241 vppppiswyl rgitakttem lihdlvaead rltggrrsds ktsskefrls kelneydpvk
      301 qifnikqrws lhrrnakqhr kkllsv
//
LOCUS       XP_016707858             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2 [Gossypium hirsutum].
ACCESSION   XP_016707858
VERSION     XP_016707858.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707858.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="ADP-ribosylation factor 2"
                     /calculated_mol_wt=20527
     Region          1..181
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107922371"
                     /coded_by="XM_016852369.2:208..753"
                     /db_xref="GeneID:107922371"
ORIGIN      
        1 mgltftklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm ltedelrdav
      121 llvfankqdl pnamnaaeit dklglnslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 a
//
LOCUS       XP_016707852             814 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 3-kinase, root isoform [Gossypium hirsutum].
ACCESSION   XP_016707852
VERSION     XP_016707852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852363.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..814
                     /product="phosphatidylinositol 3-kinase, root isoform"
                     /calculated_mol_wt=92987
     Region          1..178
                     /region_name="C2_PI3K_class_III"
                     /note="C2 domain present in class III phosphatidylinositol
                     3-kinases (PI3Ks); cd08397"
                     /db_xref="CDD:176042"
     Region          274..432
                     /region_name="PI3Ka_III"
                     /note="Phosphoinositide 3-kinase (PI3K) class III,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, PI3Ks class III...; cd00870"
                     /db_xref="CDD:238442"
     Region          467..811
                     /region_name="PI3Kc_III"
                     /note="Catalytic domain of Class III Phosphoinositide
                     3-kinase; cd00896"
                     /db_xref="CDD:270628"
     Site            order(540,542..544,546,562,564,567,598,610..613,617,620,
                     676,678,688..689)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270628"
     Site            668..676
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270628"
     Site            689..708
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270628"
     CDS             1..814
                     /gene="LOC107922365"
                     /coded_by="XM_016852363.2:252..2696"
                     /db_xref="GeneID:107922365"
ORIGIN      
        1 msgnefrffl scdinlpvtf rvdrlegtlp spnspnsgtd stteerksel yvecalyidg
       61 apfglptktr lesagplycw nelitlstky rdltahsqla ltvwdlscgk ddgliggati
      121 llfnnkmqlk tgkqklrlwl gkqadgsfpt stpgkvprqe rgelerlekl ankyergqiq
      181 pvdwldrltf kamekikdre slkngsshly lvvdfcsfeh rvvfqesgan fllpspiass
      241 nelvtvwdpe vgkinpsehk qlklarsltr giidrdlkps snerksiqri lkypptrals
      301 gderqllwkf rfslmsekra ltkflrcvew sdvqeakqai elmgkwemid vcdalellsp
      361 lfeseevray avsvleradd eelqcyllql vqalrfertd ksrlsqflvq rslrnielas
      421 flrwfvavel hdpayakrfy styefleenm ikltagvnge edgfkmwqsl vrqteltaql
      481 csimrdvrnv rgntqkkiek lrqllsglls eltyfdepir splapsvlit givpsessif
      541 ksalhplrlt frtanggqsk vifkkgddir qdqlvvqmvs lmdrllklen ldlhltpykv
      601 latgqdegml efipsrslaq ilsdhrsiis ylqkfhpdeh gpfgitatcl etfikscagy
      661 svityilgig drhldnlllr ddgrlfhvdf gfilgrdpkp fpppmklcke mveamggaes
      721 qyytrfksyc ceaynilrks snlilnlfhl magsnipdia sdpekgilkl qekfrldldd
      781 eacihffqdl inesvsalfp qmvetihrwa qywr
//
LOCUS       XP_040943278             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943278
VERSION     XP_040943278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087344.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087344.1:2101..3549"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943280             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943280
VERSION     XP_040943280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087346.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087346.1:2014..3462"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943281             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943281
VERSION     XP_040943281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087347.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087347.1:2000..3448"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943282             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943282
VERSION     XP_040943282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087348.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087348.1:1475..2923"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943283             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943283
VERSION     XP_040943283.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087349.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087349.1:1471..2919"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943284             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943284
VERSION     XP_040943284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087350.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087350.1:1903..3351"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943285             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943285
VERSION     XP_040943285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087351.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087351.1:1158..2606"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943286             482 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943286
VERSION     XP_040943286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087352.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..482
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=52031
     Region          79..453
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..482
                     /gene="LOC107922404"
                     /coded_by="XM_041087352.1:1154..2602"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksnp crgaptalti dssssikvkg ltiqnsqqmn fviskseavr
      241 vfgvkvtcpg dspntdgihi tkstnivlqd ckigtgddci sivngsstik mkriycgpgh
      301 gvsigslged nsvgivtnvv ldtallrett ngvriktwqg gsgyvrgvrf envrmedvan
      361 piiidqfycd spttcqnqts avqisqivyr nisgttkskq aikfacsntv pcsnlvlsnv
      421 nlekkdgtve tycnsaqgfg yglvhpsadc lsshdkgsil idrkdnaelt eptgdhiiht
      481 el
//
LOCUS       XP_040943287             475 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943287
VERSION     XP_040943287.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087353.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..475
                     /product="probable polygalacturonase At1g80170 isoform X2"
                     /calculated_mol_wt=51348
     Region          79..446
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..475
                     /gene="LOC107922404"
                     /coded_by="XM_041087353.1:2105..3532"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 msyciyttks isqtnkteqi maklflvsvl glliaaygva gnvvydkfni leeledmdia
       61 eedtdflesp swtsehggkv lvnvdsfgav gdgvsddtqa frkawdtacs trksvllvpp
      121 grrylvnatk fkgpcaerli vqidgtivap depknwdpdl prlwldfskl qgvafrgkgv
      181 idgsgskwwa asckknksna ltidssssik vkgltiqnsq qmnfviskse avrvfgvkvt
      241 cpgdspntdg ihitkstniv lqdckigtgd dcisivngss tikmkriycg pghgvsigsl
      301 gednsvgivt nvvldtallr ettngvrikt wqggsgyvrg vrfenvrmed vanpiiidqf
      361 ycdspttcqn qtsavqisqi vyrnisgttk skqaikfacs ntvpcsnlvl snvnlekkdg
      421 tvetycnsaq gfgyglvhps adclsshdkg silidrkdna elteptgdhi ihtel
//
LOCUS       XP_016707916             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707916
VERSION     XP_016707916.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852427.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_016852427.2:1556..2836"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_016707922             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707922
VERSION     XP_016707922.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852433.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_016852433.2:1563..2843"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943289             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943289
VERSION     XP_040943289.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087355.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087355.1:1358..2638"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943290             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943290
VERSION     XP_040943290.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087356.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087356.1:926..2206"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943291             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943291
VERSION     XP_040943291.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087357.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087357.1:839..2119"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943292             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943292
VERSION     XP_040943292.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087358.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087358.1:829..2109"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_016707923             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707923
VERSION     XP_016707923.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852434.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_016852434.2:613..1893"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943293             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943293
VERSION     XP_040943293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087359.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087359.1:1812..3092"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943294             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943294
VERSION     XP_040943294.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087360.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087360.1:1343..2623"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943295             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943295
VERSION     XP_040943295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087361.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087361.1:825..2105"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943296             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943296
VERSION     XP_040943296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087362.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087362.1:609..1889"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943297             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943297
VERSION     XP_040943297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087363.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087363.1:824..2104"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943298             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943298
VERSION     XP_040943298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087364.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087364.1:820..2100"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943299             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943299
VERSION     XP_040943299.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087365.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087365.1:594..1874"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943300             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943300
VERSION     XP_040943300.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087366.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087366.1:1389..2669"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943301             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943301
VERSION     XP_040943301.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087367.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087367.1:835..2115"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943302             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943302
VERSION     XP_040943302.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087368.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087368.1:639..1919"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943303             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943303
VERSION     XP_040943303.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087369.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087369.1:1354..2634"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943304             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943304
VERSION     XP_040943304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087370.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087370.1:1440..2720"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943305             426 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943305
VERSION     XP_040943305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087371.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=45799
     Region          23..397
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..426
                     /gene="LOC107922404"
                     /coded_by="XM_041087371.1:1339..2619"
                     /db_xref="GeneID:107922404"
ORIGIN      
        1 mdiaeedtdf lespswtseh ggkvlvnvds fgavgdgvsd dtqafrkawd tacstrksvl
       61 lvppgrrylv natkfkgpca erlivqidgt ivapdepknw dpdlprlwld fsklqgvafr
      121 gkgvidgsgs kwwaasckkn ksnpcrgapt altidssssi kvkgltiqns qqmnfvisks
      181 eavrvfgvkv tcpgdspntd gihitkstni vlqdckigtg ddcisivngs stikmkriyc
      241 gpghgvsigs lgednsvgiv tnvvldtall rettngvrik twqggsgyvr gvrfenvrme
      301 dvanpiiidq fycdspttcq nqtsavqisq ivyrnisgtt kskqaikfac sntvpcsnlv
      361 lsnvnlekkd gtvetycnsa qgfgyglvhp sadclsshdk gsilidrkdn aelteptgdh
      421 iihtel
//
LOCUS       XP_040943306             228 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 48 [Gossypium hirsutum].
ACCESSION   XP_040943306
VERSION     XP_040943306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087372.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="RNA-binding protein 48"
                     /calculated_mol_wt=26097
     Region          11..110
                     /region_name="RRM_RBM48"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 48 (RBM48) and similar proteins; cd12442"
                     /db_xref="CDD:409876"
     CDS             1..228
                     /gene="LOC107920956"
                     /coded_by="XM_041087372.1:156..842"
                     /db_xref="GeneID:107920956"
ORIGIN      
        1 mprykedppa vcvytvcdes rylivrnvpa lgcgddllkl fanygdveec kpmdaedceq
       61 ftdvywikfr lisnarfakr kldefvflrn sllvsyapqf eslddtkdkl egrrkeilar
      121 lnsqrskghp vhrvlssnea pslpasshhi pdqinnrlrd vgdaefrshs nnaritrvss
      181 dkdyfpsqsm nqtvktvrdk lnkiqssteh lqagptpkkt qvdnrrri
//
LOCUS       XP_016707815             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase BOI [Gossypium hirsutum].
ACCESSION   XP_016707815
VERSION     XP_016707815.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852326.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707815.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase BOI"
                     /calculated_mol_wt=37707
     Region          <146..204
                     /region_name="Stathmin"
                     /note="Stathmin family; pfam00836"
                     /db_xref="CDD:459956"
     Region          288..333
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..339
                     /gene="LOC107922333"
                     /coded_by="XM_016852326.2:485..1504"
                     /db_xref="GeneID:107922333"
ORIGIN      
        1 mlggnegnpm lpicmdengl pyqtnasnql qlfgrlpvgc tvdvvnyfgn ehlapmvppn
       61 kkghetedil rqqklqisln ykiykeeadc sgsipnphav stglrlsydd dernssmtsa
      121 sgsmthgplm ilalgdnvtt eldrqkeefd qyikmqeehl tkgirdmkqr htasflaaie
      181 kgvskklrek dveletvnrk nrelvdgikq vtmeaqnwhh rakynesvvn vlkrnleqvm
      241 sqsqggeqqg kegfgesevd daasyidpnn llsipdvgga kcvsrnrhgm icracnakev
      301 svllmpcrhl cickdcdvli svcpvcqvkk tarvqvyls
//
LOCUS       XP_016707814             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase BOI [Gossypium hirsutum].
ACCESSION   XP_016707814
VERSION     XP_016707814.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852325.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707814.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase BOI"
                     /calculated_mol_wt=37707
     Region          <146..204
                     /region_name="Stathmin"
                     /note="Stathmin family; pfam00836"
                     /db_xref="CDD:459956"
     Region          288..333
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..339
                     /gene="LOC107922333"
                     /coded_by="XM_016852325.2:574..1593"
                     /db_xref="GeneID:107922333"
ORIGIN      
        1 mlggnegnpm lpicmdengl pyqtnasnql qlfgrlpvgc tvdvvnyfgn ehlapmvppn
       61 kkghetedil rqqklqisln ykiykeeadc sgsipnphav stglrlsydd dernssmtsa
      121 sgsmthgplm ilalgdnvtt eldrqkeefd qyikmqeehl tkgirdmkqr htasflaaie
      181 kgvskklrek dveletvnrk nrelvdgikq vtmeaqnwhh rakynesvvn vlkrnleqvm
      241 sqsqggeqqg kegfgesevd daasyidpnn llsipdvgga kcvsrnrhgm icracnakev
      301 svllmpcrhl cickdcdvli svcpvcqvkk tarvqvyls
//
LOCUS       XP_016707813             339 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase BOI [Gossypium hirsutum].
ACCESSION   XP_016707813
VERSION     XP_016707813.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852324.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707813.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="E3 ubiquitin-protein ligase BOI"
                     /calculated_mol_wt=37707
     Region          <146..204
                     /region_name="Stathmin"
                     /note="Stathmin family; pfam00836"
                     /db_xref="CDD:459956"
     Region          288..333
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..339
                     /gene="LOC107922333"
                     /coded_by="XM_016852324.2:510..1529"
                     /db_xref="GeneID:107922333"
ORIGIN      
        1 mlggnegnpm lpicmdengl pyqtnasnql qlfgrlpvgc tvdvvnyfgn ehlapmvppn
       61 kkghetedil rqqklqisln ykiykeeadc sgsipnphav stglrlsydd dernssmtsa
      121 sgsmthgplm ilalgdnvtt eldrqkeefd qyikmqeehl tkgirdmkqr htasflaaie
      181 kgvskklrek dveletvnrk nrelvdgikq vtmeaqnwhh rakynesvvn vlkrnleqvm
      241 sqsqggeqqg kegfgesevd daasyidpnn llsipdvgga kcvsrnrhgm icracnakev
      301 svllmpcrhl cickdcdvli svcpvcqvkk tarvqvyls
//
LOCUS       XP_040943307             221 aa            linear   PLN 06-AUG-2024
DEFINITION  axial regulator YABBY 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943307
VERSION     XP_040943307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087373.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..221
                     /product="axial regulator YABBY 4 isoform X1"
                     /calculated_mol_wt=25022
     Region          46..>171
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..221
                     /gene="LOC107921581"
                     /coded_by="XM_041087373.1:40..705"
                     /db_xref="GeneID:107921581"
ORIGIN      
        1 myikspphhl hclslspphf lthklsetdk ltstkkkmst lnhlfdlpeq icyvqcgfct
       61 tillvsvprs slsmvvtvrc ghctsllsvn mmkasfvplh llasfahdde pkegavseev
      121 gghrktsdrr spslmsssdn geedivrvnp tvnkppekrq rapsaynrfi kfihswwqrr
      181 dqetensksq hsaqrslqhc ckklgplssh sqaqqrrrre l
//
LOCUS       XP_040943308             254 aa            linear   PLN 06-AUG-2024
DEFINITION  axial regulator YABBY 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943308
VERSION     XP_040943308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087374.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..254
                     /product="axial regulator YABBY 4 isoform X2"
                     /calculated_mol_wt=28544
     Region          46..204
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..254
                     /gene="LOC107921581"
                     /coded_by="XM_041087374.1:473..1237"
                     /db_xref="GeneID:107921581"
ORIGIN      
        1 myikspphhl hclslspphf lthklsetdk ltstkkkmst lnhlfdlpeq icyvqcgfct
       61 tillvsvprs slsmvvtvrc ghctsllsvn mmkasfvplh llasfahdde pkegavseev
      121 gghrktsdrr spslmsssdn geedivrvnp tvnkppekrq rapsaynrfi keeirrlktq
      181 npniphkeaf staaknwahf ppihkhnkge gesceqdege aswnveatev hiqgndfrer
      241 kaarnsiwtk spfe
//
LOCUS       XP_040943309             191 aa            linear   PLN 06-AUG-2024
DEFINITION  axial regulator YABBY 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943309
VERSION     XP_040943309.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087375.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..191
                     /product="axial regulator YABBY 4 isoform X3"
                     /calculated_mol_wt=21326
     Region          1..141
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..191
                     /gene="LOC107921581"
                     /coded_by="XM_041087375.1:202..777"
                     /db_xref="GeneID:107921581"
ORIGIN      
        1 mvsvprssls mvvtvrcghc tsllsvnmmk asfvplhlla sfahddepke gavseevggh
       61 rktsdrrsps lmsssdngee divrvnptvn kppekrqrap saynrfikee irrlktqnpn
      121 iphkeafsta aknwahfppi hkhnkgeges ceqdegeasw nveatevhiq gndfrerkaa
      181 rnsiwtkspf e
//
LOCUS       XP_016708045             401 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g23390 [Gossypium hirsutum].
ACCESSION   XP_016708045
VERSION     XP_016708045.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708045.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="F-box/kelch-repeat protein At1g23390"
                     /calculated_mol_wt=44702
     Region          41..78
                     /region_name="FBOX"
                     /note="A Receptor for Ubiquitination Targets; smart00256"
                     /db_xref="CDD:197608"
     Region          <94..206
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          159..205
                     /region_name="Kelch_6"
                     /note="Kelch motif; pfam13964"
                     /db_xref="CDD:404790"
     Region          160..205
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..401
                     /gene="LOC107922490"
                     /coded_by="XM_016852556.2:4..1209"
                     /db_xref="GeneID:107922490"
ORIGIN      
        1 mervyhyivs trinyvtaqh cnnlkmaeeq keeeevaihg dvletilsyv plthllpacf
       61 vsktwnaavs sslsrfnkpk pwllvhtqsi rrphataffa ydprsdiwlq inkkqppqhv
      121 splrssnstl lhvlhpsnfs fsidpfhltw hrvnppavwr ldpivamvgp rivvaggacd
      181 feddplavei ydistrtwer tesmpatlkd sasstwlsia antrtvfmme qasgvthsfn
      241 pdsktwygpf dlrpdrsiyf svitcvgdnl imlgllgdae dvnyvklwel ngeslefgke
      301 igvmptelve klkgegtsln sirvscmggf fyiynpgepg elvalevgee gwcrwgslkn
      361 aavsdrsrva ervvltcsdv glgeiaklvg sgngiftllk r
//
LOCUS       XP_016706726             253 aa            linear   PLN 06-AUG-2024
DEFINITION  2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016706726
VERSION     XP_016706726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..253
                     /product="2-phytyl-1,4-beta-naphthoquinone
                     methyltransferase, chloroplastic"
                     /calculated_mol_wt=28264
     Region          9..253
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(72..78,97..98,126..128,144)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..253
                     /gene="LOC107921369"
                     /coded_by="XM_016851237.2:39..800"
                     /db_xref="GeneID:107921369"
ORIGIN      
        1 mhslqfsvpl lptsrfkrhs vrcasdrqql fnriapvydn lndllslgqh riwkrmavsw
       61 sgaktgdsll dlccgsgdlt flmsekagad gkvigldfsk eqlsiassrq yllskacynn
      121 iewvegdald lpfsngyfda itmgyglrnv vdkrramqem frvlkpgsrv sildfnksmq
      181 pftalfqewm idnvvvptat vyglakeyqy lktsideflt gkeleklald agfsyarhye
      241 iggglmgnlv aar
//
LOCUS       XP_040943310             258 aa            linear   PLN 06-AUG-2024
DEFINITION  putative nuclease HARBI1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943310
VERSION     XP_040943310.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087376.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="putative nuclease HARBI1 isoform X1"
                     /calculated_mol_wt=29504
     Region          114..247
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..258
                     /gene="LOC107922301"
                     /coded_by="XM_041087376.1:582..1358"
                     /db_xref="GeneID:107922301"
ORIGIN      
        1 msivedytgd esdderekkd ilqrmeyfnr lfvvasssvq lyyekyilrq scmdstqsgt
       61 gakvsqcrer fqrsgstisr hfavvlekvs rmatdliape dpffssipeq iraidgthia
      121 ailppneqip yigrkgiptq nvmaicdfnm cftfvmagwe gsahdtrifl eairdpkykf
      181 phlpngkyyl vdsgypqmkg ylgpyrgqry hlpdfrrgrp isgkeeifnh shsslrsvie
      241 rtfgvlkkmg hfkgyakl
//
LOCUS       XP_040943311             208 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943311
VERSION     XP_040943311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087377.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..208
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=24638
     CDS             1..208
                     /gene="LOC107922301"
                     /coded_by="XM_041087377.1:566..1192"
                     /db_xref="GeneID:107922301"
ORIGIN      
        1 msivedytgd esdderekkd ilqrmeyfnr lfvvasssvq lyyekyilrq scmdstqsgt
       61 gakvsqcrer fqrsgstisr hfavvlekvs rmatdliape dpffssipeq irndsrymsh
      121 fkvqlmvltl rlffhqmnkf pileekvsrl kmlwqyvili cvshlswldg kdrhmtleyf
      181 lkqfeiqntn frtfqmenii llildilk
//
LOCUS       XP_040943312             128 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter C family member 8 [Gossypium hirsutum].
ACCESSION   XP_040943312
VERSION     XP_040943312.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087378.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..128
                     /product="ABC transporter C family member 8"
                     /calculated_mol_wt=13894
     Region          <1..>105
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            20..23
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            78..87
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            98..103
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     CDS             1..128
                     /gene="LOC107922302"
                     /coded_by="XM_041087378.1:241..627"
                     /db_xref="GeneID:107922302"
ORIGIN      
        1 mlgempklsg tvsvfgsiay vsqvswiqsg tirdnilygk pmdadkydka invcaldkdi
       61 nsfdhgdlte igqrginmsg gqkqriqlar viyndadiyl lddpfrlcyd csseenccpg
      121 nsssgvsl
//
LOCUS       XP_016707329            1471 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-glucan water dikinase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707329
VERSION     XP_016707329.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851840.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707329.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1471
                     /product="alpha-glucan water dikinase, chloroplastic"
                     /calculated_mol_wt=164589
     Region          <133..>308
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     Region          285..>363
                     /region_name="VasL"
                     /note="Type VI secretion system, EvfB, or VasL; pfam12486"
                     /db_xref="CDD:463603"
     Region          <384..>567
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     Region          <1268..>1469
                     /region_name="PpsA"
                     /note="Phosphoenolpyruvate synthase/pyruvate phosphate
                     dikinase [Carbohydrate transport and metabolism]; COG0574"
                     /db_xref="CDD:440339"
     CDS             1..1471
                     /gene="LOC107922015"
                     /coded_by="XM_016851840.2:273..4688"
                     /db_xref="GeneID:107922015"
ORIGIN      
        1 msnsvgqnli qqhflrptvl ehqsklkgss giasnslcat aslnqslaqp rkyqistkfy
       61 gnslskrkhk lamgsqrpla fipqavlatd pasenlgkfn idgnielqvd asaptsgsit
      121 nvnfrvmyts dslllhwgai rgsndkwvlp srqpegtrnh knralrtpfv ksgsssylkl
      181 eiddpqiqai eflifdearn kwiknngqnf hvklpqrktl vsnisvpedl vqvqaylrwe
      241 rkgkqmytpe qekeeyeaar aeileeiskg asvddirski tkksgqeyke taineennki
      301 pddlvqiqay irwekagkpn yspeqqlref eearkelqse lekgasldei rkkitkgeik
      361 tkvakqlqnk kyfsperiqr kqrdlmqlln khavkvvees isvevepkpl tavepfakek
      421 eldgspvmnk kiyklgekel lvlvtkpagk ikihlatdle epltlhwals ekdgewlapp
      481 pavlppgsvs lekaaeskfs tstsgdlpkq vqciemeiad gnfkgmpfvl lsggkwiknn
      541 gsdfyvefsq rfkqvqkdag dgkgtskvll driaalesea qksfmhrfni asdlmdqakn
      601 igelglagil vwmrfmatrq liwnknynvk preiskaqdr ltdllqsiyt thpqhrellr
      661 mimstvgrgg egdvgqrird eilviqrnnd ckggmmeewh qklhnntspd dviicqalid
      721 yiksdfdisv ywktlnengi tkerllsydr aihsepsfkr dqkdgllrdl ghymrtlkav
      781 hsgadlesai sncmgyraeg qgfmvgvqin pipglpsgfp dllrfvlehi edrnvealle
      841 gllearqelr plllkstgrl kdllfldial dstvrtaier gyeelnnarp ekimhfitlv
      901 lenlalssdd nedlvyclkg whhsismcks ksahwalyak svlertrlal askaetyqri
      961 lqpsaeylgs llgvdqwain ifteeiirag saatlsslin rldpvlreta hlgswqvisp
     1021 vevvgyvevv dellsvqnks ydrptilvak svkgeeeipd gtiavltpdm pdvlshvsvr
     1081 arnckvcfat cfdpniladl qakkgkllrl kpssadvvys evkegelvds sssnlkgdgp
     1141 svtlvrkqfv gkyaisaeef tpemvgaksr nisylkgkvp swvgiptsva lpfgvfekvl
     1201 adeankevdq klqilkkklg egdfgaleei rqtvlqlrap sqlvqelktk mltsgmpwpg
     1261 degeqrweqa wtaikkvwas kwnerayfst rkvkldhdyl cmavlvqevi nadyafviht
     1321 tnpssgdtse iyaevvkglg etlvgaypgr alsfvckknn lnspevlgyp skpiglfirr
     1381 siifrsdsng edlegyagag lydsvpmdke ekvvvdyssd plindgkfqq ailssiagag
     1441 naieelygsp qdiegvirdg kvyvvqtrpq m
//
LOCUS       XP_040943313            1471 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-glucan water dikinase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943313
VERSION     XP_040943313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087379.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1471
                     /product="alpha-glucan water dikinase, chloroplastic"
                     /calculated_mol_wt=164589
     Region          <133..>308
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     Region          285..>363
                     /region_name="VasL"
                     /note="Type VI secretion system, EvfB, or VasL; pfam12486"
                     /db_xref="CDD:463603"
     Region          <384..>567
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     Region          <1268..>1469
                     /region_name="PpsA"
                     /note="Phosphoenolpyruvate synthase/pyruvate phosphate
                     dikinase [Carbohydrate transport and metabolism]; COG0574"
                     /db_xref="CDD:440339"
     CDS             1..1471
                     /gene="LOC107922015"
                     /coded_by="XM_041087379.1:307..4722"
                     /db_xref="GeneID:107922015"
ORIGIN      
        1 msnsvgqnli qqhflrptvl ehqsklkgss giasnslcat aslnqslaqp rkyqistkfy
       61 gnslskrkhk lamgsqrpla fipqavlatd pasenlgkfn idgnielqvd asaptsgsit
      121 nvnfrvmyts dslllhwgai rgsndkwvlp srqpegtrnh knralrtpfv ksgsssylkl
      181 eiddpqiqai eflifdearn kwiknngqnf hvklpqrktl vsnisvpedl vqvqaylrwe
      241 rkgkqmytpe qekeeyeaar aeileeiskg asvddirski tkksgqeyke taineennki
      301 pddlvqiqay irwekagkpn yspeqqlref eearkelqse lekgasldei rkkitkgeik
      361 tkvakqlqnk kyfsperiqr kqrdlmqlln khavkvvees isvevepkpl tavepfakek
      421 eldgspvmnk kiyklgekel lvlvtkpagk ikihlatdle epltlhwals ekdgewlapp
      481 pavlppgsvs lekaaeskfs tstsgdlpkq vqciemeiad gnfkgmpfvl lsggkwiknn
      541 gsdfyvefsq rfkqvqkdag dgkgtskvll driaalesea qksfmhrfni asdlmdqakn
      601 igelglagil vwmrfmatrq liwnknynvk preiskaqdr ltdllqsiyt thpqhrellr
      661 mimstvgrgg egdvgqrird eilviqrnnd ckggmmeewh qklhnntspd dviicqalid
      721 yiksdfdisv ywktlnengi tkerllsydr aihsepsfkr dqkdgllrdl ghymrtlkav
      781 hsgadlesai sncmgyraeg qgfmvgvqin pipglpsgfp dllrfvlehi edrnvealle
      841 gllearqelr plllkstgrl kdllfldial dstvrtaier gyeelnnarp ekimhfitlv
      901 lenlalssdd nedlvyclkg whhsismcks ksahwalyak svlertrlal askaetyqri
      961 lqpsaeylgs llgvdqwain ifteeiirag saatlsslin rldpvlreta hlgswqvisp
     1021 vevvgyvevv dellsvqnks ydrptilvak svkgeeeipd gtiavltpdm pdvlshvsvr
     1081 arnckvcfat cfdpniladl qakkgkllrl kpssadvvys evkegelvds sssnlkgdgp
     1141 svtlvrkqfv gkyaisaeef tpemvgaksr nisylkgkvp swvgiptsva lpfgvfekvl
     1201 adeankevdq klqilkkklg egdfgaleei rqtvlqlrap sqlvqelktk mltsgmpwpg
     1261 degeqrweqa wtaikkvwas kwnerayfst rkvkldhdyl cmavlvqevi nadyafviht
     1321 tnpssgdtse iyaevvkglg etlvgaypgr alsfvckknn lnspevlgyp skpiglfirr
     1381 siifrsdsng edlegyagag lydsvpmdke ekvvvdyssd plindgkfqq ailssiagag
     1441 naieelygsp qdiegvirdg kvyvvqtrpq m
//
LOCUS       XP_016706721             418 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706721
VERSION     XP_016706721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..418
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46323
     Region          69..176
                     /region_name="Neprosin_AP"
                     /note="Neprosin activation peptide; pfam14365"
                     /db_xref="CDD:464153"
     Region          199..411
                     /region_name="Neprosin"
                     /note="pfam03080"
                     /db_xref="CDD:460797"
     CDS             1..418
                     /gene="LOC107921364"
                     /coded_by="XM_016851232.2:525..1781"
                     /db_xref="GeneID:107921364"
ORIGIN      
        1 mvsccckipi fvfvfllllv isssicaahs setgnsqann qtfrpeeelk klklvrerln
       61 kinkpalkti qspdgdiidc vllrhqpafd hpklkgkkpl dpperpnghn rkgmaaedfq
      121 mwmmsgescp egtipirrtt eedmlrassv asfgkkptrl vrrdsssdgh ehavgyvsgd
      181 eyygakanin vwaprvsnqy efslsqlwvi sgsfgddlnt ieagwqvspe lygdyyprff
      241 tywtsdayqa tgcynllcsg fvqtnnriai gaaisptssy gggqfdisll vwkdpkhgnw
      301 wlefgsgilv gywpsilfth lrdrasmvqf ggeivnsspg gshtstemgs ghfagegfgk
      361 asyfrnlqvv dwdnnliplp nlkvladhpn cydiqggint vwgnyfyygg pgrnvncp
//
LOCUS       XP_016707294             700 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter B family member 26, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707294
VERSION     XP_016707294.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851805.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..700
                     /product="ABC transporter B family member 26,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=78647
     Region          115..698
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..700
                     /gene="LOC107921997"
                     /coded_by="XM_016851805.2:140..2242"
                     /db_xref="GeneID:107921997"
ORIGIN      
        1 malplccnak lhpgyrssah yqrlfhfvnr rtlrfsrspe vsicfkrish rlaplksssi
       61 ngfsletnld hfeeehsven velrdrirkw idflrsvlpg gswwsfsddv eikfmakpvt
      121 vwralsrmwq liakdrlvif aafstlivaa lseisiphyl tatifsaqsh eiavfhrnvr
      181 hlimicvtag icsglrgccf gianmilvkr mretlyssll lqeisffdge tvgdltsrlg
      241 sdcqqvsrvi gndlnlimrn vlqgtgaliy llilswplgv ctlvicssla aimtvygmyq
      301 kktakliqey aasanevaqe tfslmrtvrv ygtekqelkr ynhwldklae vslrqsaayg
      361 vwnltfntly hatqiiavlv ggmyilaghi taekltkfil ysewliystw wvgdnvsslm
      421 qsvgasekvf qlmdllpsdq fisegmalqk lqghiefvnv sfqylsremv pvlqhinlsv
      481 hpgevvaivg lsgsgkstmv nlllrlyept ngqilidgvp lneldtkwlr grigyvgqep
      541 klfrmdissn ikygcirnik qedvewaakl ayahdfitll pngyntlvdd dllsggqkqr
      601 iaiarailrd ptilildeat saldaesehn vkgvlrsvrs dlssrrtviv iahrlstiqa
      661 adrivvmdgg qiaemgshne llhknglyar ltrrqtdavv
//
LOCUS       XP_040943314             519 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter B family member 26, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943314
VERSION     XP_040943314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087380.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="ABC transporter B family member 26,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=57981
     Region          11..517
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..519
                     /gene="LOC107921997"
                     /coded_by="XM_041087380.1:187..1746"
                     /db_xref="GeneID:107921997"
ORIGIN      
        1 mcyrrnmqvk iyglrgccfg ianmilvkrm retlysslll qeisffdget vgdltsrlgs
       61 dcqqvsrvig ndlnlimrnv lqgtgaliyl lilswplgvc tlvicsslaa imtvygmyqk
      121 ktakliqeya asanevaqet fslmrtvrvy gtekqelkry nhwldklaev slrqsaaygv
      181 wnltfntlyh atqiiavlvg gmyilaghit aekltkfily sewliystww vgdnvsslmq
      241 svgasekvfq lmdllpsdqf isegmalqkl qghiefvnvs fqylsremvp vlqhinlsvh
      301 pgevvaivgl sgsgkstmvn lllrlyeptn gqilidgvpl neldtkwlrg rigyvgqepk
      361 lfrmdissni kygcirnikq edvewaakla yahdfitllp ngyntlvddd llsggqkqri
      421 aiarailrdp tilildeats aldaesehnv kgvlrsvrsd lssrrtvivi ahrlstiqaa
      481 drivvmdggq iaemgshnel lhknglyarl trrqtdavv
//
LOCUS       XP_016707295             352 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707295
VERSION     XP_016707295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851806.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40031
     Region          170..350
                     /region_name="Pro0498"
                     /note="Uncharacterized cyanobacterial/plant membrane
                     protein Pro0498, contains N-terminal TPR repeats [Energy
                     production and conversion]; COG5777"
                     /db_xref="CDD:444487"
     Region          176..204
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          209..243
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..352
                     /gene="LOC107921998"
                     /coded_by="XM_016851806.2:59..1117"
                     /db_xref="GeneID:107921998"
ORIGIN      
        1 mavvlgnlal lldvtsartv ttdrksrpla idvvlnlqkr dphfshvslp nksqldywdg
       61 enrapravar gkanskvkav dfdaassddd engngfeeee eeydwenemr krvkeieemr
      121 elekkaeelq skaeaeeteg edegadreet eeekrmrvrk elekvakeqa errataqlmf
      181 elgqkaygkg mygraiefle galtiiprpt lfggeiqiwl amayeannrh adcialyqql
      241 ekkhpsvsir rqaaelryil qapklkisqe emvtipligs sydsyaatwt dkykdkdqkt
      301 sgsttnqlrs srdfladflv wrppvglekn rafwvaltlw fglvgaavll qr
//
LOCUS       XP_016706352             275 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-UB [Gossypium hirsutum].
ACCESSION   XP_016706352
VERSION     XP_016706352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..275
                     /product="kinesin-like protein KIN-UB"
                     /calculated_mol_wt=31356
     Region          <2..156
                     /region_name="Kinesin"
                     /note="Kinesin motor domain; pfam00225"
                     /db_xref="CDD:459720"
     CDS             1..275
                     /gene="LOC107921014"
                     /coded_by="XM_016850863.2:478..1305"
                     /db_xref="GeneID:107921014"
ORIGIN      
        1 metiqdlldp andniystml lqvhvkrsvl geevaipses dksshffkpp kplvrksklv
       61 lvdlagserv qksgseghml eeakfinlsr salgkcinal aensahvpir dskltrllrd
      121 sfggtattsl ivtigpsprh rgetastilf gqrvenmlri kdefdyksla krleiqldkl
      181 iaenerqqka fddeverinl eaqnrvseve rnftdaleke rlkcqmeyme svkkleekmi
      241 enqrkhqhdg fmkdkcngev lciknhilfh vkfir
//
LOCUS       XP_016708091             146 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L27a-3 [Gossypium hirsutum].
ACCESSION   XP_016708091
VERSION     XP_016708091.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852602.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="60S ribosomal protein L27a-3"
                     /calculated_mol_wt=16224
     Region          1..146
                     /region_name="PTZ00160"
                     /note="60S ribosomal protein L27a; Provisional"
                     /db_xref="CDD:185489"
     CDS             1..146
                     /gene="LOC107922522"
                     /coded_by="XM_016852602.2:156..596"
                     /db_xref="GeneID:107922522"
ORIGIN      
        1 mttrfkknrk krghvsaghg rigkhrkhpg grgnaggmhh hrilfdkyhp gyfgkvgmry
       61 fhklrnkfyc pivnidklws lvpqdvkaka nkdaapmidv tqfgyfkvlg kgvlpedqpi
      121 vvkaklvskt aekkikeagg avvlta
//
LOCUS       XP_016707927             771 aa            linear   PLN 06-AUG-2024
DEFINITION  copper methylamine oxidase [Gossypium hirsutum].
ACCESSION   XP_016707927
VERSION     XP_016707927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852438.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..771
                     /product="copper methylamine oxidase"
                     /calculated_mol_wt=85806
     Region          75..748
                     /region_name="tynA"
                     /note="primary-amine oxidase; PRK11504"
                     /db_xref="CDD:236919"
     CDS             1..771
                     /gene="LOC107922409"
                     /coded_by="XM_016852438.2:254..2569"
                     /db_xref="GeneID:107922409"
ORIGIN      
        1 mastqekath knntpspsss ssaqvlqnws laapsedpip kaasmaalir paetiadppa
       61 tktttskgis impraqtshp ldplsaaeis vavatvraag atpevrdsmr fievvlvepd
      121 khvvaladay ffppfqpsll prtkggpvip sklpprkarl vvynkrsnet siwivelsev
      181 haatrgghhr gkvisskvvp nvqppmdame yaeceavvkd fppfreamkk rgiedmdlvm
      241 vdpwcagyhs sadapsrrla kplifcrtes dcpmengyar pvegihvlvd mqnmvviefe
      301 drklvplppa dplrnytage trggvdrsdv kplqiiqteg psfringnfi awqkwnfrig
      361 ftpreglviy svayidgsrg rrpvahrlsf vemvvpygdp ndphyrknaf dagedglgkn
      421 ahslkkgcdc lgyikyfdah ftnftggvet iencvclhee dhgilwkhqd wrtglaevrr
      481 srrltvsfic tvanyeygff whfyqdgkie aevkltgils lgalqpgetr kygttiapgl
      541 yapvhqhffv armdmavdck pgeafnqvve vnlkveepgk dnvhnnafya eeellrselq
      601 amrdcnplta rhwivrntrn vnrtgqltgf klvpgsnclp lagseakflr raaflkhnlw
      661 vtpyahdemy pggefpnqnp rvgeglatwv kqnrsleead vvlwyvfgvi hiprledwpv
      721 mpvdrigfml mphgffncsp avdvppsttd lelkdndiat kpiqnviiak l
//
LOCUS       XP_016708148             619 aa            linear   PLN 06-AUG-2024
DEFINITION  ARM REPEAT PROTEIN INTERACTING WITH ABF2 [Gossypium hirsutum].
ACCESSION   XP_016708148
VERSION     XP_016708148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852659.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..619
                     /product="ARM REPEAT PROTEIN INTERACTING WITH ABF2"
                     /calculated_mol_wt=68549
     Region          20..>120
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          162..>223
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     CDS             1..619
                     /gene="LOC107922569"
                     /coded_by="XM_016852659.2:973..2832"
                     /db_xref="GeneID:107922569"
ORIGIN      
        1 mmgsvgekri eddlsypill aervrsaade aesfkadcwe vgkqvdrlsq mlrtlvrftt
       61 svqslyerpi rrviaevskn leraltlvrk ckrhsvlslv vritsatdfr kvlnlldasv
      121 gdmkwlmgvl daenngsasg tflslppias ndpiiswvws ciatvqmgql tdrieaannl
      181 aslaqdndrn kkiaveeggv ppllkllkes ssmeaqitaa nallvlanep ervrsiveem
      241 gapivvqvlr dspmkvqipv tkliarmaey dpvaqedfar envirplvtl lsfetfvdds
      301 gtrlgkqsih sivqinkeme knswtssnsr nysygpyans ysnlhldgst rggnyrkere
      361 nenpevkiql kincaealwm lakgsasnsg ritetkgllc laklvekeqg elqynslmti
      421 meitaaaewn sdlrrsafkm nssaakavid qllrvikeld sptlqipair sigslartfp
      481 aretrvigpl vtqlgnnnqe vameaaiala kfaspdnfls mdhcksiief ngvpplmrll
      541 tcgektqlha vvllcylaih agdhkaleqa rvltaiegad rtmfaqhpdl kdlvsraiyq
      601 lnlyhthtgv hpqrqlyap
//
LOCUS       XP_016706469             334 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g70590 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706469
VERSION     XP_016706469.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850980.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..334
                     /product="F-box protein At1g70590 isoform X1"
                     /calculated_mol_wt=36563
     Region          52..90
                     /region_name="F-box"
                     /note="F-box domain; pfam00646"
                     /db_xref="CDD:425796"
     Region          74..264
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          112..142
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          144..173
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          178..207
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          214..243
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     CDS             1..334
                     /gene="LOC107921108"
                     /coded_by="XM_016850980.2:84..1088"
                     /db_xref="GeneID:107921108"
ORIGIN      
        1 mnqktllyrs dasrfiafpf skpdgrdakt kssrwskvss essssptndp dfsalpfdil
       61 tkiaapfnfp nllaaslvcr swgdalralr eamvllrqgk qfkhgrggvg rnlekalvsf
      121 lkgaargstl amvdagliyw ergqkeeaia lyqkaaalgd aagqcnlgis ylntqplnhk
      181 eavkwlhqas vgghvraqyq lalclhqglg veqnlqeavk wylkaaeggy vramynaslc
      241 ytfgeglshs rrqarkwmkr aadrghgkaq fehglalfse gellkaivyl elatrsgeaa
      301 athvknailq qlsatsrdla llltdnwral pssr
//
LOCUS       XP_040943315             315 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g70590 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943315
VERSION     XP_040943315.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087381.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="F-box protein At1g70590 isoform X2"
                     /calculated_mol_wt=34736
     Region          54..245
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          93..123
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          125..154
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          159..188
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          195..224
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     CDS             1..315
                     /gene="LOC107921108"
                     /coded_by="XM_041087381.1:61..1008"
                     /db_xref="GeneID:107921108"
ORIGIN      
        1 mlhltlslce lrkvkqqhep knialpigrl pvhcvsvlqt rrkrckdqif tlvqaaslvc
       61 rswgdalral reamvllrqg kqfkhgrggv grnlekalvs flkgaargst lamvdagliy
      121 wergqkeeai alyqkaaalg daagqcnlgi sylntqplnh keavkwlhqa svgghvraqy
      181 qlalclhqgl gveqnlqeav kwylkaaegg yvramynasl cytfgeglsh srrqarkwmk
      241 raadrghgka qfehglalfs egellkaivy lelatrsgea aathvknail qqlsatsrdl
      301 allltdnwra lpssr
//
LOCUS       XP_040943316             595 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943316
VERSION     XP_040943316.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087382.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..595
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67093
     Region          272..369
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(287,289,291,315..317,362)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            287..289
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            287
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(315..318,322..325)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..595
                     /gene="LOC107921207"
                     /coded_by="XM_041087382.1:1508..3295"
                     /db_xref="GeneID:107921207"
ORIGIN      
        1 msqpthqnls aeakthtmle qmmkmmadqk keidgrfqsl esavkqlqtr asstdvnlgn
       61 lqaqvnnrlp sqlvanlrdn vsavtlrngk elrsilkkvq nsdkeddtev qkvrfsdieg
      121 enlalpkvdl qlsqvapkea gksrlqqpia aydaanfeqe trvpelraqa sqntnnqprs
      181 yvpkapfpkr lmkeksddvn aeiletfrkv qvniplidai kqvpryakfl kelctskrkl
      241 ignekislgk nvsavfqkkl ptkckdpgmf sihckigdrk ldramldlga sinvmprsiy
      301 grvqlgalkd tgliiqladr snaypdgvle dvlvqvnelv fpadfyvldm gpndnsidvp
      361 lllgrpflkt artkidvykg nltmefdgei ikfnifdamr yptdinsvft lnvidnfvqd
      421 vyelgdedel ksvlaksifd ideqefivsd slidsiyald spkltrfkpi lpdltatikq
      481 vpslispskl elkklpknlk yiylgenqtl plivsnaltk mqeskllrvl rehkeafgwt
      541 radirglntt lcthkialep dsvpkrdpqr rlnppmmevv kteilkwlea msfil
//
LOCUS       XP_040943317             595 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943317
VERSION     XP_040943317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087383.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..595
                     /product="uncharacterized protein"
                     /calculated_mol_wt=67093
     Region          272..369
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(287,289,291,315..317,362)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            287..289
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            287
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(315..318,322..325)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..595
                     /gene="LOC107921207"
                     /coded_by="XM_041087383.1:1504..3291"
                     /db_xref="GeneID:107921207"
ORIGIN      
        1 msqpthqnls aeakthtmle qmmkmmadqk keidgrfqsl esavkqlqtr asstdvnlgn
       61 lqaqvnnrlp sqlvanlrdn vsavtlrngk elrsilkkvq nsdkeddtev qkvrfsdieg
      121 enlalpkvdl qlsqvapkea gksrlqqpia aydaanfeqe trvpelraqa sqntnnqprs
      181 yvpkapfpkr lmkeksddvn aeiletfrkv qvniplidai kqvpryakfl kelctskrkl
      241 ignekislgk nvsavfqkkl ptkckdpgmf sihckigdrk ldramldlga sinvmprsiy
      301 grvqlgalkd tgliiqladr snaypdgvle dvlvqvnelv fpadfyvldm gpndnsidvp
      361 lllgrpflkt artkidvykg nltmefdgei ikfnifdamr yptdinsvft lnvidnfvqd
      421 vyelgdedel ksvlaksifd ideqefivsd slidsiyald spkltrfkpi lpdltatikq
      481 vpslispskl elkklpknlk yiylgenqtl plivsnaltk mqeskllrvl rehkeafgwt
      541 radirglntt lcthkialep dsvpkrdpqr rlnppmmevv kteilkwlea msfil
//
LOCUS       XP_040943318             458 aa            linear   PLN 06-AUG-2024
DEFINITION  lipase [Gossypium hirsutum].
ACCESSION   XP_040943318
VERSION     XP_040943318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087384.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..458
                     /product="lipase"
                     /calculated_mol_wt=51892
     Region          69..>173
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..458
                     /gene="LOC107921588"
                     /coded_by="XM_041087384.1:373..1749"
                     /db_xref="GeneID:107921588"
ORIGIN      
        1 mlrwwiyalq laellvsslv hvlyglyifs tavagdlsqa ltdrffkpna nievksedps
       61 gtnvddlppi vlvhgifgfg kgklggfsyf agaekkderv lvpdlgsltg iydrarelfy
      121 ylkggqvdyg eehskayghs qfgrtyeqgn ypqwdedhpi hfvghsagaq vvrvlqqmla
      181 dkkfkgyedt senwvlsits lsgafngttr tyfdgmqpdd gktmkplsll qlcrigviiy
      241 dwldipwlkd yynfgfdhfn msrkklgawg lvecllgnag pfatgdwilt dltiqgsmgm
      301 nshlqtfpnt fyfsyatkrt tkilgvtvps gilgihpllf irvlqmsqwr hppdvpppyk
      361 gyrdedwqen dgalntismt hprlpiehps rlvvndsdcl plqpgiwyyk iveadhilfi
      421 vnreragvqf dliydsifer crkhvfrktp qtlpnqap
//
LOCUS       XP_040943319             423 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ESR2 [Gossypium hirsutum].
ACCESSION   XP_040943319
VERSION     XP_040943319.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087385.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="ethylene-responsive transcription factor ESR2"
                     /calculated_mol_wt=46186
     Region          66..131
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(68..69,71,73,75,77,81,83,90,92,95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..423
                     /gene="LOC107921423"
                     /coded_by="XM_041087385.1:220..1491"
                     /db_xref="GeneID:107921423"
ORIGIN      
        1 meeafrrlkg vvnvpdldpr dattygkksa vstttsatst tttsttpttt nkrslkengg
       61 tggtmryrgv rrrpwgryaa eirdpqsker rwlgtfdtae eaacaydcaa ramrgikart
      121 nfvypvseph sasdhllpqf nfsrqsqpsi rdlnrkhhhf ghsskwppfa nsqvgdfslg
      181 sgghqrnasl nmlllrdlln sssylsfqap ppslvdqfql ingtssaass lpsfsiptil
      241 pggtslnspt scslrasgnf adsfidstmt lprkeknssh ktsvpalsns qaddmeffrs
      301 epsdsgllqe iiqgflpkps skksdtdciq hsivppvtem sssqslsglk eskksehlgg
      361 yidycqgvpq qfesfngitg sqlvpysnei pvnhlqlgqd cmvddicqyp dimrtlatrv
      421 qng
//
LOCUS       XP_016706341              88 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706341
VERSION     XP_016706341.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706341.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..88
                     /product="DEAD-box ATP-dependent RNA helicase 15 isoform
                     X1"
                     /calculated_mol_wt=9534
     Region          45..>79
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     CDS             1..88
                     /gene="LOC107921002"
                     /coded_by="XM_016850852.2:312..578"
                     /db_xref="GeneID:107921002"
ORIGIN      
        1 mgeikdndty eeelldyeee dekapdsasi kaadsakkgn vgihssgfrg fllkpellrs
       61 ivdsgfehps egkvlnsclm ltfvnsvn
//
LOCUS       XP_040943320              82 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943320
VERSION     XP_040943320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087386.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..82
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=8921
     Region          60..>79
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..82
                     /gene="LOC107921002"
                     /coded_by="XM_041087386.1:1086..1334"
                     /db_xref="GeneID:107921002"
ORIGIN      
        1 mrvlmhspks kanvdtiier cagaghlrdd ilhyskepae yllsdlpssy gegatsnsmg
       61 fdkelnkeva ikvidleesc ll
//
LOCUS       XP_016708184             629 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g67900 [Gossypium hirsutum].
ACCESSION   XP_016708184
VERSION     XP_016708184.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852695.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="BTB/POZ domain-containing protein At1g67900"
                     /calculated_mol_wt=70072
     Region          19..124
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          209..492
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..629
                     /gene="LOC107922591"
                     /coded_by="XM_016852695.2:947..2836"
                     /db_xref="GeneID:107922591"
ORIGIN      
        1 mkfmklgsrp dtfysaesvr tvssevssdl iievkgckyl lhkfpllskc lrlqricces
       61 persqhqiiq lpdfpggiea felcakfcyg ititlsayni vaaqcaaeyl qmtedvekgn
      121 liyklevffn scilqgwrds ivtlqstkaf plwsedlgit srciesiask vlthpskvsl
      181 shshsrrvrd discngaesq rhksttkgww aedmaelgid lywramiaik sggkiptnli
      241 gqalqiyasr wlpnisrqvk anqgatsdsd sdstgevssk hrlllesivs lipsdkgdvs
      301 csfllkllka anilnassss kmelarrval qleearvsdl lipslsyssd tlydvdivlt
      361 ileefmlqgq spptspprsr lgferrrrsr saenidfefq esrrsssash ssklkvakim
      421 dgylqeiard inlplskfia iaekipdfsr ldhddlyrai diylkahpdl nkserkklcr
      481 ildckklsve acmhaaqnek lplrvvvqvl ffeqaraatv ggkvaelpsn ikallaahni
      541 dpsrpprtls tttsirgddq wsvsglkspk srtstlrmkl aeddldeydm npdglgrssk
      601 fkafcalptg pkkmfsklls inrsgsekn
//
LOCUS       XP_016708177             391 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708177
VERSION     XP_016708177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852688.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..391
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45984
     Region          42..389
                     /region_name="Glyco_transf_17"
                     /note="Glycosyltransferase family 17; pfam04724"
                     /db_xref="CDD:428090"
     CDS             1..391
                     /gene="LOC107922586"
                     /coded_by="XM_016852688.2:420..1595"
                     /db_xref="GeneID:107922586"
ORIGIN      
        1 mwwmmneggg hycskktddi cgdvcgqess rlsmsrirci lrgidlktyi flfilvptci
       61 fgiyihgqki syflrpiwes ppkpfhdiph yfhenvsmea lcelhgwrir efprrvydav
      121 lfsnevdilt irwkelypyi thfvllesns tftgipkpmv fashrdqfkf ieprltygti
      181 ggrfkkgenp fveealqrva ldyllkiagi sdddllimsd vdeipsrhti nllrwcddip
      241 qvlhlrlkny lysfeflvdn nswrasvhry qtgktryahy rqtdeilada gwhcsfcfrh
      301 isefifkmka yshndrvrfs hylnpkrvqr vickgadlfd mlpeeytfkd iigkmgpipr
      361 sfsavhlpsy llenadkykf llpgnclren e
//
LOCUS       XP_016706597             159 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase XERICO [Gossypium hirsutum].
ACCESSION   XP_016706597
VERSION     XP_016706597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851108.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="probable E3 ubiquitin-protein ligase XERICO"
                     /calculated_mol_wt=17160
     Region          113..156
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(114,117,132,134,137,140,152,155)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..159
                     /gene="LOC107921230"
                     /coded_by="XM_016851108.2:683..1162"
                     /db_xref="GeneID:107921230"
ORIGIN      
        1 mglsnfpsaa egvlpvlvmn tvlsvallkn ivrsllqvvg asttsnldie dsnedpeems
       61 karerrisit qfkslchnrh ssastsyeds apadggygss nssrgdgwvn sveccvclcg
      121 feadeevsel sckhffhkgc lekwfgnkhs tcplcrsih
//
LOCUS       XP_016706412             386 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-L-fucosidase 3 [Gossypium hirsutum].
ACCESSION   XP_016706412
VERSION     XP_016706412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="alpha-L-fucosidase 3"
                     /calculated_mol_wt=42393
     Region          35..371
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(43,113,179,351,354)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(43,351,354)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(43,113,179)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..386
                     /gene="LOC107921071"
                     /coded_by="XM_016850923.2:265..1425"
                     /db_xref="GeneID:107921071"
ORIGIN      
        1 mafdgssiiv vaifgvflvn ltsslvlakg pcqfpaifnf gdsnsdtggl saafgqappp
       61 ngmsyfghpa grycdgrlvi dflaeslglp ylsafldslg tnfthganfa tagstirpqn
      121 ttlhqsgfsp islnvqfyef hdfhvrsqiv rkrggvyetm lpkeedfssa lytfdigqnd
      181 ltsgyflnms vdevkayvpd vlnqfltiik diydvggryf wihntgpvgc lpyvmeripv
      241 lagqidrygc aspfnevaqf fnhglkktvq qlrkdlphaa ityvdvysvk yslisqgrnh
      301 gfnqplrtcc ghggkynynk nlgcggkvhk qgkdvlvaap cqdpsahvnw dgvhfteaan
      361 ryiferivdg sfsdpphpln macyrn
//
LOCUS       XP_016707762             526 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 4B2 [Gossypium hirsutum].
ACCESSION   XP_016707762
VERSION     XP_016707762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..526
                     /product="eukaryotic translation initiation factor 4B2"
                     /calculated_mol_wt=57713
     Region          1..510
                     /region_name="eIF-4B"
                     /note="Plant specific eukaryotic initiation factor 4B;
                     pfam06273"
                     /db_xref="CDD:310698"
     CDS             1..526
                     /gene="LOC107922300"
                     /coded_by="XM_016852273.2:397..1977"
                     /db_xref="GeneID:107922300"
ORIGIN      
        1 mskpwggiga waaeaereea eeraaaeaaa taaagaptae sqsfpslkea vsakpkkkkm
       61 tlsefnmgty sssgggglgs arvtennklt peemmllptr pkersteelq fgqlgggfss
      121 ygrsgppagr vmrdredsdg swgfgrrqqg gfneerrgpp srvsdydqps radevdnwai
      181 akkaspslds grqnrygglg tgggggfska deadnwtalk rsipsrsstf gsgfrdsgpe
      241 pdrwsrgggg ggireerprl vldplrgdvn elvvktnksn pfgaarpree vlaekgldwk
      301 kldseieakk etsrptsahs srpssaqssr segplqqaie nvvkprpkvn pfgdakprev
      361 llegrgqdwr kidleldrrr idrpeteeek ilkeeidnlk kelekdltpn sesgdqhslh
      421 erllhkerel emlildlenk arfgqkvver pgsgagrtgs ftdrppsqsg sidgsrsvef
      481 mdrprsrgta dawtrpgddr rgfqagrdrg fvgnrdmdrp rsrerw
//
LOCUS       XP_040943322             228 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 2 [Gossypium hirsutum].
ACCESSION   XP_040943322
VERSION     XP_040943322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087388.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="protein ARABIDILLO 2"
                     /calculated_mol_wt=25438
     Region          39..80
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(43..44,46..48,51..52,55,66..68,70,73)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(43,47,50..51,54..55,59,61..62,66..68,70)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          162..>222
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..228
                     /gene="LOC107920968"
                     /coded_by="XM_041087388.1:961..1647"
                     /db_xref="GeneID:107920968"
ORIGIN      
        1 mservrqkcs hseekyqtni sletldsgcl nsptvcgvdw ttlpddtviq lfsylnyrdr
       61 aslastcrtf rllgslpylw gsldlrsykf dtvaavslsl rckslqrlkf laagsadaiv
      121 slqarelrei sgdfcrditd aalsvfviss lstplsntgs tvyqevhekv rdavialidk
      181 eregeqidra lltnvlgifv eigmgqmdry eddfeeamlq dtllprfp
//
LOCUS       XP_040943323             228 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 2 [Gossypium hirsutum].
ACCESSION   XP_040943323
VERSION     XP_040943323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087389.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="protein ARABIDILLO 2"
                     /calculated_mol_wt=25438
     Region          39..80
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(43..44,46..48,51..52,55,66..68,70,73)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(43,47,50..51,54..55,59,61..62,66..68,70)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          162..>222
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..228
                     /gene="LOC107920968"
                     /coded_by="XM_041087389.1:861..1547"
                     /db_xref="GeneID:107920968"
ORIGIN      
        1 mservrqkcs hseekyqtni sletldsgcl nsptvcgvdw ttlpddtviq lfsylnyrdr
       61 aslastcrtf rllgslpylw gsldlrsykf dtvaavslsl rckslqrlkf laagsadaiv
      121 slqarelrei sgdfcrditd aalsvfviss lstplsntgs tvyqevhekv rdavialidk
      181 eregeqidra lltnvlgifv eigmgqmdry eddfeeamlq dtllprfp
//
LOCUS       XP_040943324             228 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 2 [Gossypium hirsutum].
ACCESSION   XP_040943324
VERSION     XP_040943324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087390.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="protein ARABIDILLO 2"
                     /calculated_mol_wt=25438
     Region          39..80
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(43..44,46..48,51..52,55,66..68,70,73)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(43,47,50..51,54..55,59,61..62,66..68,70)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          162..>222
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..228
                     /gene="LOC107920968"
                     /coded_by="XM_041087390.1:152..838"
                     /db_xref="GeneID:107920968"
ORIGIN      
        1 mservrqkcs hseekyqtni sletldsgcl nsptvcgvdw ttlpddtviq lfsylnyrdr
       61 aslastcrtf rllgslpylw gsldlrsykf dtvaavslsl rckslqrlkf laagsadaiv
      121 slqarelrei sgdfcrditd aalsvfviss lstplsntgs tvyqevhekv rdavialidk
      181 eregeqidra lltnvlgifv eigmgqmdry eddfeeamlq dtllprfp
//
LOCUS       XP_040943325             228 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 2 [Gossypium hirsutum].
ACCESSION   XP_040943325
VERSION     XP_040943325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087391.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="protein ARABIDILLO 2"
                     /calculated_mol_wt=25438
     Region          39..80
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(43..44,46..48,51..52,55,66..68,70,73)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(43,47,50..51,54..55,59,61..62,66..68,70)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          162..>222
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..228
                     /gene="LOC107920968"
                     /coded_by="XM_041087391.1:866..1552"
                     /db_xref="GeneID:107920968"
ORIGIN      
        1 mservrqkcs hseekyqtni sletldsgcl nsptvcgvdw ttlpddtviq lfsylnyrdr
       61 aslastcrtf rllgslpylw gsldlrsykf dtvaavslsl rckslqrlkf laagsadaiv
      121 slqarelrei sgdfcrditd aalsvfviss lstplsntgs tvyqevhekv rdavialidk
      181 eregeqidra lltnvlgifv eigmgqmdry eddfeeamlq dtllprfp
//
LOCUS       XP_016707346             863 aa            linear   PLN 06-AUG-2024
DEFINITION  protein-tyrosine-phosphatase MKP1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707346
VERSION     XP_016707346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..863
                     /product="protein-tyrosine-phosphatase MKP1 isoform X1"
                     /calculated_mol_wt=95522
     Region          109..243
                     /region_name="DSP"
                     /note="dual-specificity phosphatase domain; cd14498"
                     /db_xref="CDD:350348"
     Region          <288..354
                     /region_name="GEL"
                     /note="Gelsolin homology domain; smart00262"
                     /db_xref="CDD:214590"
     Region          <764..856
                     /region_name="ADF_gelsolin"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; cl15697"
                     /db_xref="CDD:472830"
     CDS             1..863
                     /gene="LOC107922033"
                     /coded_by="XM_016851857.2:501..3092"
                     /db_xref="GeneID:107922033"
ORIGIN      
        1 mlgedekdrh aragvaarkp ylrsvswtdr spikphprpp qntkgrsclp plsitrrpve
       61 ewpkagsddl gvwpnpqtpr gsvkplespg snrefqlrrd klaffdkecs riaehiylgs
      121 davaknrell rkngithvln cvgfvcpeyf khdlvyktlw lqdspsedit silydvfdyf
      181 edvqeqggkv lvhccqgvsr ssslviaylm wregqsfeda fqyvkaargv tnpntgfafq
      241 llqcqkrvha vpaspnsvlr myrmaphssy dalhlvpkmv nypgklalds rgafivhvps
      301 aiyvwvgkkc ncvmsnsags aanqviryeq akgpiltvre gdeplefwda lasgqisadg
      361 cdraevrkvv klasendnia avskisvger kvddydldfq lfhkalaggv vppfsvsnte
      421 setclparen gwgrlrqkfa ngimkeflns sklgccnlsp vydrsdmvme ihkdtkdtvl
      481 ilspssssif pcgkpesfdc fpdcspiqkk dpceeveklv tpfgspllps spcgssnsfs
      541 cfaaispkls skspslspsa sdyassftfs psssnwsdls ylssqqpsps gleatdlspi
      601 knnvssmens clpykesfps stksfssdci lrvenpcmpc kgtppslaer rgshppprmw
      661 lpsadaqvpg tlvrsrsfsl pnleddvmnd idcnryeped ggkelmldve avpsieshsr
      721 sedkreygec qaqssgifkt ptrvttpaly qwptlnkvem hrsdilepaa vyvllasers
      781 lgasdhstvl yiwlgrdace kgqsqflscd dthgnshhhw esighdflnk mdlplnasiq
      841 ivregeepeq flnlfncymv leg
//
LOCUS       XP_040943327             826 aa            linear   PLN 06-AUG-2024
DEFINITION  protein-tyrosine-phosphatase MKP1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943327
VERSION     XP_040943327.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087393.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..826
                     /product="protein-tyrosine-phosphatase MKP1 isoform X2"
                     /calculated_mol_wt=91674
     Region          109..243
                     /region_name="DSP"
                     /note="dual-specificity phosphatase domain; cd14498"
                     /db_xref="CDD:350348"
     Region          <727..819
                     /region_name="ADF_gelsolin"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; cl15697"
                     /db_xref="CDD:472830"
     CDS             1..826
                     /gene="LOC107922033"
                     /coded_by="XM_041087393.1:394..2874"
                     /db_xref="GeneID:107922033"
ORIGIN      
        1 mlgedekdrh aragvaarkp ylrsvswtdr spikphprpp qntkgrsclp plsitrrpve
       61 ewpkagsddl gvwpnpqtpr gsvkplespg snrefqlrrd klaffdkecs riaehiylgs
      121 davaknrell rkngithvln cvgfvcpeyf khdlvyktlw lqdspsedit silydvfdyf
      181 edvqeqggkv lvhccqgvsr ssslviaylm wregqsfeda fqyvkaargv tnpntgfafq
      241 llqcqkrvha vpaspnsvlr myrmaphssy dalhlvpkmv nypaanqvir yeqakgpilt
      301 vregdeplef wdalasgqis adgcdraevr kvvklasend niaavskisv gerkvddydl
      361 dfqlfhkala ggvvppfsvs ntesetclpa rengwgrlrq kfangimkef lnssklgccn
      421 lspvydrsdm vmeihkdtkd tvlilspsss sifpcgkpes fdcfpdcspi qkkdpceeve
      481 klvtpfgspl lpsspcgssn sfscfaaisp klsskspsls psasdyassf tfspsssnws
      541 dlsylssqqp spsgleatdl spiknnvssm ensclpykes fpsstksfss dcilrvenpc
      601 mpckgtppsl aerrgshppp rmwlpsadaq vpgtlvrsrs fslpnleddv mndidcnrye
      661 pedggkelml dveavpsies hsrsedkrey gecqaqssgi fktptrvttp alyqwptlnk
      721 vemhrsdile paavyvllas erslgasdhs tvlyiwlgrd acekgqsqfl scddthgnsh
      781 hhwesighdf lnkmdlplna siqivregee peqflnlfnc ymvleg
//
LOCUS       XP_016707347             631 aa            linear   PLN 06-AUG-2024
DEFINITION  coilin isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707347
VERSION     XP_016707347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..631
                     /product="coilin isoform X1"
                     /calculated_mol_wt=70259
     Region          5..>86
                     /region_name="Coilin_N"
                     /note="Coilin N-terminus; pfam15862"
                     /db_xref="CDD:464910"
     CDS             1..631
                     /gene="LOC107922034"
                     /coded_by="XM_016851858.2:314..2209"
                     /db_xref="GeneID:107922034"
ORIGIN      
        1 metarlrlvf edpnilsksq kkqglkrswf ilkpqhqtif dlssdllhif dlrkscpngl
       61 ilsmdgfvlp pfeptcilkd kdivsvkmkg gksaeiikag ngmnyleele tmerlpvntg
      121 vkhlaneefd ketggyksel eedeqelapl edqaqvestp ienmvskkrk ardklpssrk
      181 kksklasaek ypvsgddgid vrpkkskssh kkkvstndkv vgkdkpadiq gepensstpe
      241 idetgddktn lgrssqlqnt gkgsadelit ttevkklpsr sarrkkakrr wlreqaklvk
      301 ekpqskellg kddqqspake nlkfseeclq aisnndvedn vvpivvrpgh irfepleeed
      361 aeqaiqhsqi svktfqwngi tskkkgqkwg mektpflkrn dnnfshvsse mvdvndkatv
      421 tndmdfdkrm pysslpkegd lvayrlvels stwtpelcsf rvgeishyda esnrimltpv
      481 pgypnasgkk tdeeaselpd tslygedgsl eidysslidv rlvklgnsna tiaiaddnne
      541 nyaqnqdvlt rqpkgskean svsaafpaqa ngavnvweei nqalsakkae lskedgwsra
      601 dssgrsawsf ralrrsalgp tmaflraqng i
//
LOCUS       XP_016707349             630 aa            linear   PLN 06-AUG-2024
DEFINITION  coilin isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707349
VERSION     XP_016707349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..630
                     /product="coilin isoform X2"
                     /calculated_mol_wt=70130
     Region          5..>86
                     /region_name="Coilin_N"
                     /note="Coilin N-terminus; pfam15862"
                     /db_xref="CDD:464910"
     CDS             1..630
                     /gene="LOC107922034"
                     /coded_by="XM_016851860.2:238..2130"
                     /db_xref="GeneID:107922034"
ORIGIN      
        1 metarlrlvf edpnilsksq kkqglkrswf ilkpqhqtif dlssdllhif dlrkscpngl
       61 ilsmdgfvlp pfeptcilkd kdivsvkmkg gksaeiikag ngmnyleele tmerlpvntg
      121 vkhlaneefd ketggyksel eedeqelapl edqaqvestp ienmvskkrk ardklpssrk
      181 kksklasaek ypvsgddgid vrpkkskssh kkkvstndkv vgkdkpadiq gepensstpe
      241 idetgddktn lgrssqlqnt gkgsadelit ttevkklpsr sarrkkakrr wlreqaklvk
      301 ekpqskellg kddqqspake nlkfseeclq aisnndvedn vvpivvrpgh irfepleeda
      361 eqaiqhsqis vktfqwngit skkkgqkwgm ektpflkrnd nnfshvssem vdvndkatvt
      421 ndmdfdkrmp ysslpkegdl vayrlvelss twtpelcsfr vgeishydae snrimltpvp
      481 gypnasgkkt deeaselpdt slygedgsle idysslidvr lvklgnsnat iaiaddnnen
      541 yaqnqdvltr qpkgskeans vsaafpaqan gavnvweein qalsakkael skedgwsrad
      601 ssgrsawsfr alrrsalgpt maflraqngi
//
LOCUS       XP_016706673             563 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyl hydrolase 5 family protein [Gossypium hirsutum].
ACCESSION   XP_016706673
VERSION     XP_016706673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851184.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..563
                     /product="glycosyl hydrolase 5 family protein"
                     /calculated_mol_wt=62668
     Region          52..352
                     /region_name="BglC"
                     /note="Aryl-phospho-beta-D-glucosidase BglC, GH1 family
                     [Carbohydrate transport and metabolism]; COG2730"
                     /db_xref="CDD:442036"
     Region          406..509
                     /region_name="Ricin_B_lectin"
                     /note="Ricin-type beta-trefoil lectin domain; cl47023"
                     /db_xref="CDD:481363"
     CDS             1..563
                     /gene="LOC107921303"
                     /coded_by="XM_016851184.2:239..1930"
                     /db_xref="GeneID:107921303"
ORIGIN      
        1 mgsfisssil llfllfptii qhakpamslp lstnsrwivd eegqrvklac vnwvshlepv
       61 vaeglskqpm dmiakrivtm gfncvrftwp lflitndsla sltvrqsfqr lgllesiagi
      121 qsnnpsiidv slikayqavv sslgkndvmv ildnhlskpg wccsnfdgng ffgdqyfnpd
      181 lwitgltrma tlfngvtnvv gmslrnelrg pkqnvndwyr ymqkgaeavh sanpdvlvil
      241 sglsydsdls fiqnrpvqls fsgklvfevh wygfsdgqaw vtgnpnqvcg rvakdmmrrs
      301 gflvdqgypl fvseygvdqr gtnvndnryl ncflgvvael dldwalwtlv gsyylregvi
      361 glneyygvln ynwcetrnss fierisalqs pfrgpglset klhkvifhps tglcvirksf
      421 ldplrlgpca dseswsyssd ktlvvkgtyf clqadesgtl aklgifcsds nskwemiads
      481 kmhlssklrn gksicldvds snaivtnsck ciskdntcdp asqwfklvds trsrseeqsf
      541 lhfdsifdlp gkgflsnlmv gsi
//
LOCUS       XP_016706704             218 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L9 [Gossypium hirsutum].
ACCESSION   XP_016706704
VERSION     XP_016706704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851215.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..218
                     /product="50S ribosomal protein L9"
                     /calculated_mol_wt=25235
     Region          45..195
                     /region_name="RplI"
                     /note="Ribosomal protein L9 [Translation, ribosomal
                     structure and biogenesis]; COG0359"
                     /db_xref="CDD:440128"
     CDS             1..218
                     /gene="LOC107921342"
                     /coded_by="XM_016851215.2:161..817"
                     /db_xref="GeneID:107921342"
ORIGIN      
        1 mayiqygrha lrqiiketnv qqshdrlmqp lfyacqgiry rkldviltts ieklgkaget
       61 vkvapgyfrn hlmpkllavp nidkfaylik eqrkiyqpke eevqvvtknv edkskvyeka
      121 ayrllngrlv lrrsinvekf raqstkddpi elrspvtkde ivaevgrqlc vqidpenlhl
      181 ptpletfglf dvqlrmpksi plpegrynwt lkfkiqgk
//
LOCUS       XP_016706449             428 aa            linear   PLN 06-AUG-2024
DEFINITION  protein JINGUBANG [Gossypium hirsutum].
ACCESSION   XP_016706449
VERSION     XP_016706449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..428
                     /product="protein JINGUBANG"
                     /calculated_mol_wt=46989
     Region          78..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <88..409
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          203..238
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          244..283
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          288..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          332..371
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..428
                     /gene="LOC107921092"
                     /coded_by="XM_016850960.2:259..1545"
                     /db_xref="GeneID:107921092"
ORIGIN      
        1 mkvgsclptc ltsddsavpf prspshsdnr gsttsssnss sdtsygglht npslqtlpsv
       61 pslqylfpet lgfsvshvtv tsinprpehp itciavqgnf lyaasinevn vydrqtstll
      121 dvfnsqgsss gsvksitfcd gkiftahqdc kirvwqmtva kkhkfltalp tvndrlrrfi
      181 lpknyvnerr hvkrlwieha davtglavnk cliysvswdk tlkiwrasdm rclqsikahd
      241 dainavtvsg datvytgsad rrirvwakrt gekqyslmat lekhksavna lalnadgsml
      301 fsgacdrsil vweredssny mavtgamrgh gkaiscltsv sdllmsgstd qtvriwqrgv
      361 egkywclavl eghlkpvksl tavkdeeesd viwissgsld geirtckvwl skpssplsst
      421 tdilkwtl
//
LOCUS       XP_016706787            1253 aa            linear   PLN 06-AUG-2024
DEFINITION  putative multidrug resistance protein [Gossypium hirsutum].
ACCESSION   XP_016706787
VERSION     XP_016706787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1253
                     /product="putative multidrug resistance protein"
                     /calculated_mol_wt=137062
     Region          67..1245
                     /region_name="PTZ00265"
                     /note="multidrug resistance protein (mdr1); Provisional"
                     /db_xref="CDD:240339"
     Region          669..1248
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..1253
                     /gene="LOC107921450"
                     /coded_by="XM_016851298.2:308..4069"
                     /db_xref="GeneID:107921450"
ORIGIN      
        1 mannggglfr yadgvdkvll flgtlgsigd gmmspvnmyi lsgalndygs shqsfsnqiv
       61 dkyalrllys aigvgisafi egvcwtrsae rqasrmriey lksvlrqqvg ffedltdsss
      121 tfqvistvts dahsiqdtia dkipnclahl tsfilslvva fklswrltla alpfalmfit
      181 pglgfgkalm sigaemkaay gnaggiaeqa issirtvysy vaeretlenf snalqksmel
      241 gmkqgftkgl ligsmgiiya awafqawvgg vlvtekgeng gdvfvagici ilgglsvmsa
      301 lpnlsfisea rhsaskifem idrnpnihse ngkekllshv rgevefkevd fsypsrpetl
      361 vlhgfnlkvq agkmvglvgg sgsgkstais llerfydpvn gdilldghni kklqlkwlrs
      421 qmglvnqepi lfatsikeni lfgkedasme lvikaakaas ahdfivklpn gyetqvgelg
      481 lqlsggqkqr vaiaralird pkillldeat saldaqseki vqealdhash grttiivahr
      541 lstirkvdli avvqsgrvie sgshdeliqm nngaggaykk mvqlqrtetq neesnglfhl
      601 tearhnlmnr tpgtpvsvrs syqsspaypl sptyafspvi sytiassvem hlnenrndkn
      661 inksslsgwr llqmnapewk rtlmgcfgav ssgaiqpiya ycmgtvasvy fledssklks
      721 eirlyslifl glavasffan llqhynfaim gerlvkrvre ktlakvltfe igwfdedens
      781 saaicarlst eastfrsfia drmsllvqvf fsaslaflfs livtwriaiv miafqpllig
      841 sfysrsvlmr smsekaqkaq negsqlasea ivnhrtitaf ssqkkilnlf vetmrgprqq
      901 sikqgyisgf glfssqfltt asisltfwyg grlitqglvt pkhlfqtffi lmstgkniad
      961 tgsmtsdlak gggaikrifa ildrrseiep hedgkgieve esnkgeielk gvffayparp
     1021 nqmifrglcl kikagktlal vgqsgsgkst iiglierfyd pqsgsifidg ydiksynlrn
     1081 lrsqialvsq eptlfagtir qniaygkvea keaeirkaai lanahefiss mkdgyetycg
     1141 ergiklsggq kqrialarai lknpmillld eatsaldses eslvqkalek mmvrrtsvvv
     1201 ahrfstieka dsiavikngk vveqgshssl lgigragayy slinlqtghs pyr
//
LOCUS       XP_016706252              63 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706252
VERSION     XP_016706252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850763.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..63
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7443
     CDS             1..63
                     /gene="LOC107920928"
                     /coded_by="XM_016850763.2:383..574"
                     /db_xref="GeneID:107920928"
ORIGIN      
        1 mvrvatyfgm slgafvfwqs mekvhvwial hqdekkerln seaeirrmre ellhqakqne
       61 rla
//
LOCUS       XP_040943328             117 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor UPBEAT1 [Gossypium hirsutum].
ACCESSION   XP_040943328
VERSION     XP_040943328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087394.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..117
                     /product="transcription factor UPBEAT1"
                     /calculated_mol_wt=13577
     Region          54..109
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(54..55,58..59,61..62,66,83..84)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381450"
     Site            order(64..65,68,71..72,75,84..85,88..89,92,95,98..99,102,
                     105..106,108..109)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..117
                     /gene="LOC121213944"
                     /coded_by="XM_041087394.1:40..393"
                     /db_xref="GeneID:121213944"
ORIGIN      
        1 mgisplplls ldcndqmses krrlkvkkqr vwgktvkrhw rcrrrsrsml mkripegctr
       61 tlnpfqkkvk tlkklipnke smglgglfrd taeyimclqm rvkvmqimvk vltgsne
//
LOCUS       XP_016706629             427 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706629
VERSION     XP_016706629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..427
                     /product="actin-related protein 3 isoform X1"
                     /calculated_mol_wt=47743
     Region          9..418
                     /region_name="ASKHA_NBD_Arp3-like"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein3 (Arp3) and similar proteins; cd10221"
                     /db_xref="CDD:466822"
     CDS             1..427
                     /gene="LOC107921268"
                     /coded_by="XM_016851140.2:231..1514"
                     /db_xref="GeneID:107921268"
ORIGIN      
        1 mdptsrptvv idngtgyskm gfagnvepcf nqptvvalnd sylnqsrass klnmaaqysa
       61 gvmadldffi gdeallrsra sntytlsypi nhgqvedwda merywqhcif nylrcdpedh
      121 yflltesplt npenreymge imfetfnipg lyiavnsvla laagyttskc emtgvvvdvg
      181 egatrvvpva dgyvigscik sipiagqdvt lfiqelmrer gekmppedsf eaarkvkemy
      241 cytcsdivke fnkhdkepak fikqwrgirl ktgapyacdi gyerflgpev lfspeiytsd
      301 yitplpalid kciqsapidt rralyknivl sggstmfkdf hrrlqrdlkk ivdarvqaat
      361 ahhggdikak pvevhvvshp iqrfavwfgg svlastpeff eachtkaeye ehgasicrvn
      421 pvfkgmy
//
LOCUS       XP_016706630             408 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706630
VERSION     XP_016706630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..408
                     /product="actin-related protein 3 isoform X2"
                     /calculated_mol_wt=45722
     Region          1..399
                     /region_name="ASKHA_NBD_Arp3-like"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein3 (Arp3) and similar proteins; cd10221"
                     /db_xref="CDD:466822"
     CDS             1..408
                     /gene="LOC107921268"
                     /coded_by="XM_016851141.2:280..1506"
                     /db_xref="GeneID:107921268"
ORIGIN      
        1 mgfagnvepc fnqptvvaln dsylnqsras sklnmaaqys agvmadldff igdeallrsr
       61 asntytlsyp inhgqvedwd amerywqhci fnylrcdped hyflltespl tnpenreymg
      121 eimfetfnip glyiavnsvl alaagyttsk cemtgvvvdv gegatrvvpv adgyvigsci
      181 ksipiagqdv tlfiqelmre rgekmppeds feaarkvkem ycytcsdivk efnkhdkepa
      241 kfikqwrgir lktgapyacd igyerflgpe vlfspeiyts dyitplpali dkciqsapid
      301 trralykniv lsggstmfkd fhrrlqrdlk kivdarvqaa tahhggdika kpvevhvvsh
      361 piqrfavwfg gsvlastpef feachtkaey eehgasicrv npvfkgmy
//
LOCUS       XP_016706631             390 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016706631
VERSION     XP_016706631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..390
                     /product="actin-related protein 3 isoform X3"
                     /calculated_mol_wt=43548
     Region          9..381
                     /region_name="ASKHA_NBD_Arp3-like"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein3 (Arp3) and similar proteins; cd10221"
                     /db_xref="CDD:466822"
     CDS             1..390
                     /gene="LOC107921268"
                     /coded_by="XM_016851142.2:233..1405"
                     /db_xref="GeneID:107921268"
ORIGIN      
        1 mdptsrptvv idngtgyskm gfagnvepcf nqptvvalnd sylnqsrass klnmaaqysa
       61 gvmadldffi gdeallrsra sntytlsypi nhgqvedwda merywqhcif nylrcdpedh
      121 yflltesplt npenreymge imfetfnipg lyiavnsvla laagyttskc emtgvvvdvg
      181 egatrvvpva dgyvigscik sipiagqdvt lfiqelmrer gekmppedsf eaarkvkemy
      241 cytcsdivke fnkhdkepak fikqwrgirl ktgapyacdi gyerflgpen ivlsggstmf
      301 kdfhrrlqrd lkkivdarvq aatahhggdi kakpvevhvv shpiqrfavw fggsvlastp
      361 effeachtka eyeehgasic rvnpvfkgmy
//
LOCUS       XP_016707152              77 aa            linear   PLN 06-AUG-2024
DEFINITION  classical arabinogalactan protein 11 [Gossypium hirsutum].
ACCESSION   XP_016707152
VERSION     XP_016707152.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851663.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..77
                     /product="classical arabinogalactan protein 11"
                     /calculated_mol_wt=7109
     CDS             1..77
                     /gene="LOC107921822"
                     /coded_by="XM_016851663.2:122..355"
                     /db_xref="GeneID:107921822"
ORIGIN      
        1 marqivvlal aimvlfalvs tavaapapap ggsslgspgd asspppqasa pspssgaale
       61 vsaiaagaaa vasyfmf
//
LOCUS       XP_016707634             535 aa            linear   PLN 06-AUG-2024
DEFINITION  T-complex protein 1 subunit epsilon [Gossypium hirsutum].
ACCESSION   XP_016707634
VERSION     XP_016707634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852145.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..535
                     /product="T-complex protein 1 subunit epsilon"
                     /calculated_mol_wt=59116
     Region          6..531
                     /region_name="TCP1_epsilon"
                     /note="TCP-1 (CTT or eukaryotic type II) chaperonin
                     family, epsilon subunit. Chaperonins are involved in
                     productive folding of proteins. They share a common
                     general morphology, a double toroid of 2 stacked rings. In
                     contrast to bacterial group I chaperonins...; cd03339"
                     /db_xref="CDD:239455"
     Site            order(21,25,53..56,58,76,78,82,86,89,388,525..531)
                     /site_type="other"
                     /note="ring oligomerisation interface [polypeptide
                     binding]"
                     /db_xref="CDD:239455"
     Site            order(48..50,100,104,167,400,418,458,502,504)
                     /site_type="other"
                     /note="ATP/Mg binding site [chemical binding]"
                     /db_xref="CDD:239455"
     Site            order(438,456,465,467..468,471)
                     /site_type="active"
                     /note="stacking interactions [active]"
                     /db_xref="CDD:239455"
     CDS             1..535
                     /gene="LOC107922229"
                     /coded_by="XM_016852145.2:104..1711"
                     /db_xref="GeneID:107922229"
ORIGIN      
        1 malafdeygr pfiilkeqdq ktrlrgidaq kanisagkav arilrtslgp kgmdkilqsp
       61 dgdvtitndg atileqmdvd nqiaklmvel srsqdyeigd gttgvvvmag alleqaerll
      121 ergihpiria egyemasria vehlehisqk fdfgasniep lvqtcmttls skivnrckrh
      181 laeisvkavl svadlerkdv nldmikvegk vggkledtel iygitvdkdm shpqmpkqie
      241 dakiailtcp feppkpktkh kvdidtvekf qtlrlqeqky fddmvqkckd vgatlvicqw
      301 gfddeanhll mhrnlpavrw vggvelelia iatggrivpr fqeltpeklg raglvreksf
      361 gttkdkmlyi ehcansravt ifirggnkmm ieetkrsihd alcvarnlir nnsivygggs
      421 aeiscsiave aaadkypgve qyairafada ldsvpmalae nsglqpietl savksqqikd
      481 nnphygidcn dvgtndmreq dvfetligkq qqillatqvv kmilkiddvi spsdy
//
LOCUS       XP_016706332             201 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem II core complex proteins psbY, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016706332
VERSION     XP_016706332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850843.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="photosystem II core complex proteins psbY,
                     chloroplastic"
                     /calculated_mol_wt=20658
     Region          5..201
                     /region_name="PLN00063"
                     /note="photosystem II core complex proteins psbY;
                     Provisional"
                     /db_xref="CDD:215044"
     CDS             1..201
                     /gene="LOC107920999"
                     /coded_by="XM_016850843.2:504..1109"
                     /db_xref="GeneID:107920999"
ORIGIN      
        1 maasvatmam lnakclsiss tkmssptkpt pkpfsllsmq nlpkgltisk pannsnlpss
       61 lagsaiagai fstlsscdpa laaqqiaeia egdnrglall lpiipaiawv lfnilqpaln
      121 qlnrmrsskg viiglglggl aasgfmstpe asaseiamva daassdnrgt lllfvvapal
      181 lwvaynilqp alnqlnrmrs q
//
LOCUS       XP_040943329            1948 aa            linear   PLN 06-AUG-2024
DEFINITION  sporulation-specific protein 15 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943329
VERSION     XP_040943329.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087395.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1948
                     /product="sporulation-specific protein 15 isoform X1"
                     /calculated_mol_wt=220745
     Region          197..985
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          831..1612
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1495..>1803
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1948
                     /gene="LOC107922559"
                     /coded_by="XM_041087395.1:267..6113"
                     /db_xref="GeneID:107922559"
ORIGIN      
        1 msefhdlens gtvdnrpiyp qsstnqvels hvdsredlfv dapdelnndn keggmpavsp
       61 nvavsegkrn avarlfdetd nndsnhfvne mehlralleq avdekerlev kykeemevls
      121 reihmkdqei erlnardiss vaeagkevft eknrqyevtm erilaalasv vnqgdvmghs
      181 sgeqvdlvek smlaliekyn qflfevnqlr qcltkaeydf gvqefgtlfv avrdelfelr
      241 rkeallveki glledenrkf veqvenekvt vntlnselgk tkaeceeekm kcantkekln
      301 lavtkgkslv qqrdalkqsl adkaseldkc laelqektsa leaaeshnve lvksenlvas
      361 lqellsqktl ivetfehils hldvpeelqs vdivgrarwl anernelkga sldfcrlkds
      421 icaidlpenv sfsdlgsrla wlkesfyrak ddinmlqnem srtketasde idklsalrsa
      481 vqqekdyime eldhlriknd eivakaeqis ldkdhlsdsl aaeltekdki qkelddltnk
      541 yenivgkvhq lssekdqmfr llvegsgkvm gdqevieets snlpvlidrc leklkeqtsp
      601 svetpfvdae lfekyqslly vrdlelmlck eileedmlvw sqlndlsnqf rvtsqelfsl
      661 keekdvlqkd lerseekagl vrekltmavk kgkglvqdrd nlkilleekk seieklrlei
      721 qqeesrvaec rdqintlsad lervpklesn lvamkeerdq lekfltesns ilqrvvesid
      781 rivipvdsef lepvekldll agyfgdcrta ntqteqelme vkeessnlag klaqaqetmk
      841 lledalavvk ndlsqlaeek kemefdkkhi eielqktiee arllekacda rksleealsq
      901 aenktsvlit ekedvqgnks asdmevekmr eeiaiqtsrl aeayntittl enalslaekt
      961 vaslteqnnn aqveitnldn elkklknetd thtsqlkdag itiklpdnvl akaendfsal
     1021 lgekrtadqe vstlnsklnv cmeelagssg nlasrsmeli ghlnnlqmla kdqsllstmr
     1081 qcfdrnterl kdmdltiknv reylfdkdlk lqqgypfsed iasllrqfsd didntlniem
     1141 endeanaina vdvslcfrrv tegfqmrnki ladrfegfss fldesiatll kklqaiedev
     1201 ksmikhkesf kqeyvqkeld dltskyekvv ekvhqlslek dqmvqllveg sgivigeqeg
     1261 teeassnlpg liyrclekik ersasletpf vdkdhfenfq sllyvrglel mlceeileed
     1321 mlvrsqlndl snqfkvtsqe lfalkeekdv lqkgleqsee ksgllkekls mavkkgkglv
     1381 qdreklkvlm eekmseiekl rlelqqeesr faecgeqiss lsadldrslk lesnlasmke
     1441 ekdqlekllf esnrrlhtvv esincivipv dsaflepvqk lnllseyiyd cqtakkqteq
     1501 elrevkeeas ilagklaear atmklledal ntvkndlaql ageknemetg kknieielqk
     1561 tieqrdesqs rvfklesdve glegscremr lkiedyqake drwkekeael lssynsllmk
     1621 vkeaeeplls asqlrtlmem lsgieiplve sedlephisa dvkklfsvig sltdlqnrin
     1681 llsnekeelq stlsrqnfei qhlkgeieth vrnkpdlehm kmelsevtfg lekiivvlgg
     1741 kefiggqisv gmkvllpvle kqvnafllea ktskskaeel gtklagsqkv vnelstkvkl
     1801 ledsiqgrtv ppevvqersi feapsastgs eiseiedlgs fgknpissap laahvrtmrk
     1861 gstdhlalni dseadrlins ketdkqkcrs fnslntsgli pkqgkliadr vdgiwvsggq
     1921 vlssrprarl gliayclllh iwllgtvl
//
LOCUS       XP_040943330            1944 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MLP1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943330
VERSION     XP_040943330.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087396.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1944
                     /product="protein MLP1 isoform X2"
                     /calculated_mol_wt=220227
     Region          193..981
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          827..1608
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1491..>1799
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1944
                     /gene="LOC107922559"
                     /coded_by="XM_041087396.1:250..6084"
                     /db_xref="GeneID:107922559"
ORIGIN      
        1 msefhdlens gtvdnrpiyp qsstnqvels hvdsredlfv dapdelnndn keggmpavsp
       61 nvavsegkrn avarlfdetd nndsnhfvne mehlralleq avdekerlee emevlsreih
      121 mkdqeierln ardissvaea gkevfteknr qyevtmeril aalasvvnqg dvmghssgeq
      181 vdlveksmla liekynqflf evnqlrqclt kaeydfgvqe fgtlfvavrd elfelrrkea
      241 llvekiglle denrkfveqv enekvtvntl nselgktkae ceeekmkcan tkeklnlavt
      301 kgkslvqqrd alkqsladka seldkclael qektsaleaa eshnvelvks enlvaslqel
      361 lsqktlivet fehilshldv peelqsvdiv grarwlaner nelkgasldf crlkdsicai
      421 dlpenvsfsd lgsrlawlke sfyrakddin mlqnemsrtk etasdeidkl salrsavqqe
      481 kdyimeeldh lrikndeiva kaeqisldkd hlsdslaael tekdkiqkel ddltnkyeni
      541 vgkvhqlsse kdqmfrllve gsgkvmgdqe vieetssnlp vlidrclekl keqtspsvet
      601 pfvdaelfek yqsllyvrdl elmlckeile edmlvwsqln dlsnqfrvts qelfslkeek
      661 dvlqkdlers eekaglvrek ltmavkkgkg lvqdrdnlki lleekkseie klrleiqqee
      721 srvaecrdqi ntlsadlerv pklesnlvam keerdqlekf ltesnsilqr vvesidrivi
      781 pvdseflepv ekldllagyf gdcrtantqt eqelmevkee ssnlagklaq aqetmklled
      841 alavvkndls qlaeekkeme fdkkhieiel qktieearll ekacdarksl eealsqaenk
      901 tsvliteked vqgnksasdm evekmreeia iqtsrlaeay ntittlenal slaektvasl
      961 teqnnnaqve itnldnelkk lknetdthts qlkdagitik lpdnvlakae ndfsallgek
     1021 rtadqevstl nsklnvcmee lagssgnlas rsmelighln nlqmlakdqs llstmrqcfd
     1081 rnterlkdmd ltiknvreyl fdkdlklqqg ypfsediasl lrqfsddidn tlniemende
     1141 anainavdvs lcfrrvtegf qmrnkiladr fegfssflde siatllkklq aiedevksmi
     1201 khkesfkqey vqkelddlts kyekvvekvh qlslekdqmv qllvegsgiv igeqegteea
     1261 ssnlpgliyr clekikersa sletpfvdkd hfenfqslly vrglelmlce eileedmlvr
     1321 sqlndlsnqf kvtsqelfal keekdvlqkg leqseeksgl lkeklsmavk kgkglvqdre
     1381 klkvlmeekm seieklrlel qqeesrfaec geqisslsad ldrslklesn lasmkeekdq
     1441 lekllfesnr rlhtvvesin civipvdsaf lepvqklnll seyiydcqta kkqteqelre
     1501 vkeeasilag klaearatmk lledalntvk ndlaqlagek nemetgkkni eielqktieq
     1561 rdesqsrvfk lesdvegleg scremrlkie dyqakedrwk ekeaellssy nsllmkvkea
     1621 eepllsasql rtlmemlsgi eiplvesedl ephisadvkk lfsvigsltd lqnrinllsn
     1681 ekeelqstls rqnfeiqhlk geiethvrnk pdlehmkmel sevtfgleki ivvlggkefi
     1741 ggqisvgmkv llpvlekqvn aflleaktsk skaeelgtkl agsqkvvnel stkvklleds
     1801 iqgrtvppev vqersifeap sastgseise iedlgsfgkn pissaplaah vrtmrkgstd
     1861 hlalnidsea drlinsketd kqkcrsfnsl ntsglipkqg kliadrvdgi wvsggqvlss
     1921 rprarlglia yclllhiwll gtvl
//
LOCUS       XP_040943331            2718 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943331
VERSION     XP_040943331.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087397.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2718
                     /product="serine-rich adhesin for platelets isoform X1"
                     /calculated_mol_wt=267547
     Region          1099..2381
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1183..>1468
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <1353..>1717
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2363..2693
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2369,2450,2518,2676,2679)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2369,2676,2679)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2369,2450,2518)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2718
                     /gene="LOC107922274"
                     /coded_by="XM_041087397.1:56..8212"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstgv nsfttnnhkg sghtsssnfa hsgsftasgh
     1381 ssashsygfk asgsssgseg yksstsdssv sgnskasstk nesasmgtna satngsttfi
     1441 ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh tgsghtsssn
     1501 fahsgsftas ghssashsyg fkasgsssgs egyksstsds svsgnskass tknesasmgt
     1561 dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp stdsghssas
     1621 hssgfkasgf ssgsegskss tsdssvsgis kasstknesa smgtnasatn gpttfiptsp
     1681 stgsegskss tsnpsatstk dtgastgtst smtngptass hssashssgf ktpgsststs
     1741 ssmangptts ghtpspsest isstnsgssv gigsstsshs ttnnesgskt sgfstntdss
     1801 ennghksfss tlspstgtss hhtnnpitsh htdlglsaht ssfftssdss tsndfgskns
     1861 gsslntssst pfgsssspst sigspesnsh masnhsnsgy skhtgsstts ghsstgnsfg
     1921 sktsssstni gsattdghta tgstlsassg fsshktnshm tsshtkssss thtgssshtg
     1981 slttsgskts gsstntgsat tdgsattgsi lshssgsssh ktnshmssgh tksgssthtg
     2041 sskhtgsftt sgsktsgsst stgstttngh attgsatidg hettssissh ssgssshktn
     2101 shstsaptks csctctptds snhtgsattd ghtttgsiss hssgssshkt nshttsahtk
     2161 sgssthtgss khtgsfktsg skisgsstnt gsattgghtt tgsisshssg stshksnsht
     2221 tsthtksgss thtgsskhtg sfttsghsst ssdfgsktsg sskstssskn ndhvtsgsts
     2281 spsidygspm tsstttsght nsesstsnnf gsktsgsfrg tnsydapgst nlgistssdi
     2341 smgsgsskss slenqfsgtf skvfafgdsy tdtgnaqslg ilkdfasafl ssffqtidsn
     2401 lhfegrssng rlvidflcds lnisllppfe vasknssine dcgvnfavgg stslsgdfft
     2461 nhkitnnllw qgtplgfqtq iewfnqfvtk kvcngetveq ckeqmgnnli wlgqmgaddf
     2521 arvigssisl rwltditlgq iskilttvld sgarfivvqg lpplgcwpla klltphfakd
     2581 emgcsavink aimahndllq ktleefrrny pnatiayady fnafktvmgn ltefgfsdgs
     2641 gaccgvgggl nfnlnnlcgm dgtntcsnpn ayihwdgihl teamnkqiar lfllegfcqp
     2701 sfvdlikrhq sllqpslq
//
LOCUS       XP_040943332            2707 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943332
VERSION     XP_040943332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087398.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2707
                     /product="serine-rich adhesin for platelets isoform X2"
                     /calculated_mol_wt=266526
     Region          <1182..2013
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1221..>1574
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2352..2682
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2358,2439,2507,2665,2668)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2358,2665,2668)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2358,2439,2507)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2707
                     /gene="LOC107922274"
                     /coded_by="XM_041087398.1:56..8179"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstgv nsfttnnhkg sghtsssnfa hsgsftasgh
     1381 ssashsygfk asgsssgseg yksstsdssv sgnskasstk nesasmgtna satngsttfi
     1441 ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh tgsghtsssn
     1501 fahsgsftas ghssashsyg fkasgsssgs egyksstsds svsgnskass tknesasmgt
     1561 dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp stdsghssas
     1621 hssgfkasgf ssgsegskss tsdssvsgis kasstknesa smgtnasatn gpttfiptsp
     1681 stgsegskss tsnpsgtsts mtngptassh ssashssgfk tpgsststss smangpttsg
     1741 htpspsesti sstnsgssvg igsstsshst tnnesgskts gfstntdsse nnghksfsst
     1801 lspstgtssh htnnpitshh tdlglsahts sfftssdsst sndfgsknsg sslntssstp
     1861 fgsssspsts igspesnshm asnhsnsgys khtgssttsg hsstgnsfgs ktsssstnig
     1921 sattdghtat gstlsassgf sshktnshmt sshtksssst htgssshtgs lttsgsktsg
     1981 sstntgsatt dgsattgsil shssgssshk tnshmssght ksgssthtgs skhtgsftts
     2041 gsktsgssts tgstttngha ttgsatidgh ettssisshs sgssshktns hstsaptksc
     2101 sctctptdss nhtgsattdg htttgsissh ssgssshktn shttsahtks gssthtgssk
     2161 htgsfktsgs kisgsstntg sattgghttt gsisshssgs tshksnshtt sthtksgsst
     2221 htgsskhtgs fttsghssts sdfgsktsgs skstsssknn dhvtsgstss psidygspmt
     2281 sstttsghtn sesstsnnfg sktsgsfrgt nsydapgstn lgistssdis mgsgssksss
     2341 lenqfsgtfs kvfafgdsyt dtgnaqslgi lkdfasafls sffqtidsnl hfegrssngr
     2401 lvidflcdsl nisllppfev asknssined cgvnfavggs tslsgdfftn hkitnnllwq
     2461 gtplgfqtqi ewfnqfvtkk vcngetveqc keqmgnnliw lgqmgaddfa rvigssislr
     2521 wltditlgqi skilttvlds garfivvqgl pplgcwplak lltphfakde mgcsavinka
     2581 imahndllqk tleefrrnyp natiayadyf nafktvmgnl tefgfsdgsg accgvgggln
     2641 fnlnnlcgmd gtntcsnpna yihwdgihlt eamnkqiarl fllegfcqps fvdlikrhqs
     2701 llqpslq
//
LOCUS       XP_040943333            2701 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943333
VERSION     XP_040943333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087399.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2701
                     /product="serine-rich adhesin for platelets isoform X3"
                     /calculated_mol_wt=265821
     Region          <1089..1933
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1204..>1557
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2346..2676
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2352,2433,2501,2659,2662)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2352,2659,2662)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2352,2433,2501)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2701
                     /gene="LOC107922274"
                     /coded_by="XM_041087399.1:56..8161"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssgtsssvtn gsttstppps ppkgdgyska sssssgsegy ksstsdssvs giskasstkn
     1141 esasmgtnas atngpttfip tspstgsdgs ksstsnpsgt stsvtngpta stpssspstg
     1201 vssfttnshk gsghtsssnf ahsgsftasg hssashsygf kasgsssgse gyksstsdsp
     1261 vsgnskasst knesasmgtd asatngsttf iptspstgsd gsksstsnps gtstsvtngp
     1321 tastpsssps tgvnsfttnn hkgsghtsss nfahsgsfta sghssashsy gfkasgsssg
     1381 segyksstsd ssvsgnskas stknesasmg tnasatngst tfiptspstg sdgsksstsn
     1441 psgtstsvtn gptastpsss pstgvssftt nshtgsghts ssnfahsgsf tasghssash
     1501 sygfkasgss sgsegyksst sdssvsgnsk asstknesas mgtdasatng sttfiptsps
     1561 tgsdgsksst snpsgtstsv tngptastps sspstdsghs sashssgfka sgfssgsegs
     1621 ksstsdssvs giskasstkn esasmgtnas atngpttfip tspstgsegs ksstsnpsat
     1681 stkdtgastg tstsmtngpt asshssashs sgfktpgsst stsssmangp ttsghtpsps
     1741 estisstnsg ssvgigssts shsttnnesg sktsgfstnt dssennghks fsstlspstg
     1801 tsshhtnnpi tshhtdlgls ahtssfftss dsstsndfgs knsgsslnts sstpfgssss
     1861 pstsigspes nshmasnhsn sgyskhtgss ttsghsstgn sfgsktssss tnigsattdg
     1921 htatgstlsa ssgfsshktn shmtsshtks sssthtgsss htgslttsgs ktsgsstntg
     1981 sattdgsatt gsilshssgs sshktnshms sghtksgsst htgsskhtgs fttsgsktsg
     2041 sststgsttt nghattgsat idghettssi sshssgsssh ktnshstsap tkscsctctp
     2101 tdssnhtgsa ttdghtttgs isshssgsss hktnshttsa htksgsstht gsskhtgsfk
     2161 tsgskisgss tntgsattgg htttgsissh ssgstshksn shttsthtks gssthtgssk
     2221 htgsfttsgh sstssdfgsk tsgsskstss sknndhvtsg stsspsidyg spmtssttts
     2281 ghtnsessts nnfgsktsgs frgtnsydap gstnlgists sdismgsgss kssslenqfs
     2341 gtfskvfafg dsytdtgnaq slgilkdfas aflssffqti dsnlhfegrs sngrlvidfl
     2401 cdslnisllp pfevasknss inedcgvnfa vggstslsgd fftnhkitnn llwqgtplgf
     2461 qtqiewfnqf vtkkvcnget veqckeqmgn nliwlgqmga ddfarvigss islrwltdit
     2521 lgqiskiltt vldsgarfiv vqglpplgcw plaklltphf akdemgcsav inkaimahnd
     2581 llqktleefr rnypnatiay adyfnafktv mgnltefgfs dgsgaccgvg gglnfnlnnl
     2641 cgmdgtntcs npnayihwdg ihlteamnkq iarlfllegf cqpsfvdlik rhqsllqpsl
     2701 q
//
LOCUS       XP_040943334            2688 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943334
VERSION     XP_040943334.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087400.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2688
                     /product="serine-rich adhesin for platelets isoform X4"
                     /calculated_mol_wt=264433
     Region          597..2159
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1153..>1438
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <1323..>1687
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2333..2663
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2339,2420,2488,2646,2649)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2339,2646,2649)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2339,2420,2488)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2688
                     /gene="LOC107922274"
                     /coded_by="XM_041087400.1:56..8122"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg tsssvtngst
     1081 tstpppsppk gdgyskasss ssgsegykss tsdssvsgis kasstknesa smgtnasatn
     1141 gpttfiptsp stgsdgskss tsnpsgtsts vtngptastp ssspstgvss fttnshkgsg
     1201 htsssnfahs gsftasghss ashsygfkas gsssgsegyk sstsdspvsg nskasstkne
     1261 sasmgtdasa tngsttfipt spstgsdgsk sstsnpsgts tsvtngptas tpssspstgv
     1321 nsfttnnhkg sghtsssnfa hsgsftasgh ssashsygfk asgsssgseg yksstsdssv
     1381 sgnskasstk nesasmgtna satngsttfi ptspstgsdg sksstsnpsg tstsvtngpt
     1441 astpssspst gvssfttnsh tgsghtsssn fahsgsftas ghssashsyg fkasgsssgs
     1501 egyksstsds svsgnskass tknesasmgt dasatngstt fiptspstgs dgsksstsnp
     1561 sgtstsvtng ptastpsssp stdsghssas hssgfkasgf ssgsegskss tsdssvsgis
     1621 kasstknesa smgtnasatn gpttfiptsp stgsegskss tsnpsatstk dtgastgtst
     1681 smtngptass hssashssgf ktpgsststs ssmangptts ghtpspsest isstnsgssv
     1741 gigsstsshs ttnnesgskt sgfstntdss ennghksfss tlspstgtss hhtnnpitsh
     1801 htdlglsaht ssfftssdss tsndfgskns gsslntssst pfgsssspst sigspesnsh
     1861 masnhsnsgy skhtgsstts ghsstgnsfg sktsssstni gsattdghta tgstlsassg
     1921 fsshktnshm tsshtkssss thtgssshtg slttsgskts gsstntgsat tdgsattgsi
     1981 lshssgsssh ktnshmssgh tksgssthtg sskhtgsftt sgsktsgsst stgstttngh
     2041 attgsatidg hettssissh ssgssshktn shstsaptks csctctptds snhtgsattd
     2101 ghtttgsiss hssgssshkt nshttsahtk sgssthtgss khtgsfktsg skisgsstnt
     2161 gsattgghtt tgsisshssg stshksnsht tsthtksgss thtgsskhtg sfttsghsst
     2221 ssdfgsktsg sskstssskn ndhvtsgsts spsidygspm tsstttsght nsesstsnnf
     2281 gsktsgsfrg tnsydapgst nlgistssdi smgsgsskss slenqfsgtf skvfafgdsy
     2341 tdtgnaqslg ilkdfasafl ssffqtidsn lhfegrssng rlvidflcds lnisllppfe
     2401 vasknssine dcgvnfavgg stslsgdfft nhkitnnllw qgtplgfqtq iewfnqfvtk
     2461 kvcngetveq ckeqmgnnli wlgqmgaddf arvigssisl rwltditlgq iskilttvld
     2521 sgarfivvqg lpplgcwpla klltphfakd emgcsavink aimahndllq ktleefrrny
     2581 pnatiayady fnafktvmgn ltefgfsdgs gaccgvgggl nfnlnnlcgm dgtntcsnpn
     2641 ayihwdgihl teamnkqiar lfllegfcqp sfvdlikrhq sllqpslq
//
LOCUS       XP_040943335            2685 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943335
VERSION     XP_040943335.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087401.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2685
                     /product="serine-rich adhesin for platelets isoform X5"
                     /calculated_mol_wt=264435
     Region          <1099..1974
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1353..>1717
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2330..2660
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2336,2417,2485,2643,2646)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2336,2643,2646)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2336,2417,2485)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2685
                     /gene="LOC107922274"
                     /coded_by="XM_041087401.1:56..8113"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstgv nsfttnnhkg sghtsssnfa hsgsftasgh
     1381 ssashsygfk asgsssgseg yksstsdssv sgnskasstk nesasmgtna satngsttfi
     1441 ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh tgsghtsssn
     1501 fahsgsftas ghssashsyg fkasgsssgs egyksstsds svsgnskass tknesasmgt
     1561 dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp stdsghssas
     1621 hssgfkasgf ssgsegskss tsdssvsgis kasstknesa smgtnasatn gpttfiptsp
     1681 stgsegskss tsnpsatstk dtgastgtst smtngptass hssashssgf ktpgssvgig
     1741 sstsshsttn nesgsktsgf stntdssenn ghksfsstls pstgtsshht nnpitshhtd
     1801 lglsahtssf ftssdsstsn dfgsknsgss lntssstpfg sssspstsig spesnshmas
     1861 nhsnsgyskh tgssttsghs stgnsfgskt sssstnigsa ttdghtatgs tlsassgfss
     1921 hktnshmtss htksssstht gssshtgslt tsgsktsgss tntgsattdg sattgsilsh
     1981 ssgssshktn shmssghtks gssthtgssk htgsfttsgs ktsgsststg stttnghatt
     2041 gsatidghet tssisshssg ssshktnshs tsaptkscsc tctptdssnh tgsattdght
     2101 ttgsisshss gssshktnsh ttsahtksgs sthtgsskht gsfktsgski sgsstntgsa
     2161 ttgghtttgs isshssgsts hksnshttst htksgsstht gsskhtgsft tsghsstssd
     2221 fgsktsgssk stsssknndh vtsgstssps idygspmtss tttsghtnse sstsnnfgsk
     2281 tsgsfrgtns ydapgstnlg istssdismg sgssksssle nqfsgtfskv fafgdsytdt
     2341 gnaqslgilk dfasaflssf fqtidsnlhf egrssngrlv idflcdslni sllppfevas
     2401 knssinedcg vnfavggsts lsgdfftnhk itnnllwqgt plgfqtqiew fnqfvtkkvc
     2461 ngetveqcke qmgnnliwlg qmgaddfarv igssislrwl tditlgqisk ilttvldsga
     2521 rfivvqglpp lgcwplakll tphfakdemg csavinkaim ahndllqktl eefrrnypna
     2581 tiayadyfna fktvmgnlte fgfsdgsgac cgvggglnfn lnnlcgmdgt ntcsnpnayi
     2641 hwdgihltea mnkqiarlfl legfcqpsfv dlikrhqsll qpslq
//
LOCUS       XP_040943336            2674 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943336
VERSION     XP_040943336.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087402.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2674
                     /product="serine-rich adhesin for platelets isoform X6"
                     /calculated_mol_wt=262971
     Region          <1221..>1574
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <1222..2057
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2319..2649
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2325,2406,2474,2632,2635)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2325,2632,2635)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2325,2406,2474)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2674
                     /gene="LOC107922274"
                     /coded_by="XM_041087402.1:55..8079"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstgv nsfttnnhkg sghtsssnfa hsgsftasgh
     1381 ssashsygfk asgsssgseg yksstsdssv sgnskasstk nesasmgtna satngsttfi
     1441 ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh tgsghtsssn
     1501 fahsgsftas ghssashsyg fkasgsssgs egyksstsds svsgnskass tknesasmgt
     1561 dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp stdsghssas
     1621 hssgfkasgf ssgsegskss tsdssvsgis kasstknesa smgtnasatn gpttfiptsp
     1681 stgsegskss tsnpsatstk dtgastgtst smtngptass hssashssgf ktpgsststs
     1741 ssmangptts ghtpspsest isstnsgssv gigsstsshs ttnnesgskt sgfstntdss
     1801 ennghksfss tlspstgssl ntssstpfgs ssspstsigs pesnshmasn hsnsgyskht
     1861 gssttsghss tgnsfgskts ssstnigsat tdghtatgst lsassgfssh ktnshmtssh
     1921 tkssssthtg ssshtgsltt sgsktsgsst ntgsattdgs attgsilshs sgssshktns
     1981 hmssghtksg ssthtgsskh tgsfttsgsk tsgsststgs tttnghattg satidghett
     2041 ssisshssgs sshktnshst saptkscsct ctptdssnht gsattdghtt tgsisshssg
     2101 ssshktnsht tsahtksgss thtgsskhtg sfktsgskis gsstntgsat tgghtttgsi
     2161 sshssgstsh ksnshttsth tksgssthtg sskhtgsftt sghsstssdf gsktsgssks
     2221 tsssknndhv tsgstsspsi dygspmtsst ttsghtnses stsnnfgskt sgsfrgtnsy
     2281 dapgstnlgi stssdismgs gsskssslen qfsgtfskvf afgdsytdtg naqslgilkd
     2341 fasaflssff qtidsnlhfe grssngrlvi dflcdslnis llppfevask nssinedcgv
     2401 nfavggstsl sgdfftnhki tnnllwqgtp lgfqtqiewf nqfvtkkvcn getveqckeq
     2461 mgnnliwlgq mgaddfarvi gssislrwlt ditlgqiski lttvldsgar fivvqglppl
     2521 gcwplakllt phfakdemgc savinkaima hndllqktle efrrnypnat iayadyfnaf
     2581 ktvmgnltef gfsdgsgacc gvggglnfnl nnlcgmdgtn tcsnpnayih wdgihlteam
     2641 nkqiarlfll egfcqpsfvd likrhqsllq pslq
//
LOCUS       XP_040943337            2674 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040943337
VERSION     XP_040943337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087403.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2674
                     /product="serine-rich adhesin for platelets isoform X7"
                     /calculated_mol_wt=263414
     Region          <1099..1980
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1221..>1574
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2319..2649
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2325,2406,2474,2632,2635)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2325,2632,2635)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2325,2406,2474)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2674
                     /gene="LOC107922274"
                     /coded_by="XM_041087403.1:56..8080"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstgv nsfttnnhkg sghtsssnfa hsgsftasgh
     1381 ssashsygfk asgsssgseg yksstsdssv sgnskasstk nesasmgtna satngsttfi
     1441 ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh tgsghtsssn
     1501 fahsgsftas ghssashsyg fkasgsssgs egyksstsds svsgnskass tknesasmgt
     1561 dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp stdsghssas
     1621 hssgfkasgf ssgsegskss tsdssvsgis kasstknesa smgtnasatn gpttfiptsp
     1681 stgsegskss tsnpsgtsts mtngptassh ssashssgfk tpgssvgigs stsshsttnn
     1741 esgsktsgfs tntdssenng hksfsstlsp stgtsshhtn npitshhtdl glsahtssff
     1801 tssdsstsnd fgsknsgssl ntssstpfgs ssspstsigs pesnshmasn hsnsgyskht
     1861 gssttsghss tgnsfgskts ssstnigsat tdghtatgst lsassgfssh ktnshmtssh
     1921 tkssssthtg ssshtgsltt sgsktsgsst ntgsattdgs attgsilshs sgssshktns
     1981 hmssghtksg ssthtgsskh tgsfttsgsk tsgsststgs tttnghattg satidghett
     2041 ssisshssgs sshktnshst saptkscsct ctptdssnht gsattdghtt tgsisshssg
     2101 ssshktnsht tsahtksgss thtgsskhtg sfktsgskis gsstntgsat tgghtttgsi
     2161 sshssgstsh ksnshttsth tksgssthtg sskhtgsftt sghsstssdf gsktsgssks
     2221 tsssknndhv tsgstsspsi dygspmtsst ttsghtnses stsnnfgskt sgsfrgtnsy
     2281 dapgstnlgi stssdismgs gsskssslen qfsgtfskvf afgdsytdtg naqslgilkd
     2341 fasaflssff qtidsnlhfe grssngrlvi dflcdslnis llppfevask nssinedcgv
     2401 nfavggstsl sgdfftnhki tnnllwqgtp lgfqtqiewf nqfvtkkvcn getveqckeq
     2461 mgnnliwlgq mgaddfarvi gssislrwlt ditlgqiski lttvldsgar fivvqglppl
     2521 gcwplakllt phfakdemgc savinkaima hndllqktle efrrnypnat iayadyfnaf
     2581 ktvmgnltef gfsdgsgacc gvggglnfnl nnlcgmdgtn tcsnpnayih wdgihlteam
     2641 nkqiarlfll egfcqpsfvd likrhqsllq pslq
//
LOCUS       XP_040943338            2663 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040943338
VERSION     XP_040943338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087404.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2663
                     /product="serine-rich adhesin for platelets isoform X8"
                     /calculated_mol_wt=261950
     Region          <1193..1969
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1221..>1574
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2308..2638
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2314,2395,2463,2621,2624)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2314,2621,2624)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2314,2395,2463)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2663
                     /gene="LOC107922274"
                     /coded_by="XM_041087404.1:55..8046"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstgv nsfttnnhkg sghtsssnfa hsgsftasgh
     1381 ssashsygfk asgsssgseg yksstsdssv sgnskasstk nesasmgtna satngsttfi
     1441 ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh tgsghtsssn
     1501 fahsgsftas ghssashsyg fkasgsssgs egyksstsds svsgnskass tknesasmgt
     1561 dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp stdsghssas
     1621 hssgfkasgf ssgsegskss tsdssvsgis kasstknesa smgtnasatn gpttfiptsp
     1681 stgsegskss tsnpsgtsts mtngptassh ssashssgfk tpgsststss smangpttsg
     1741 htpspsesti sstnsgssvg igsstsshst tnnesgskts gfstntdsse nnghksfsst
     1801 lspstgssln tssstpfgss sspstsigsp esnshmasnh snsgyskhtg ssttsghsst
     1861 gnsfgsktss sstnigsatt dghtatgstl sassgfsshk tnshmtssht kssssthtgs
     1921 sshtgsltts gsktsgsstn tgsattdgsa ttgsilshss gssshktnsh mssghtksgs
     1981 sthtgsskht gsfttsgskt sgsststgst ttnghattgs atidghetts sisshssgss
     2041 shktnshsts aptkscsctc tptdssnhtg sattdghttt gsisshssgs sshktnshtt
     2101 sahtksgsst htgsskhtgs fktsgskisg sstntgsatt gghtttgsis shssgstshk
     2161 snshttstht ksgssthtgs skhtgsftts ghsstssdfg sktsgsskst sssknndhvt
     2221 sgstsspsid ygspmtsstt tsghtnsess tsnnfgskts gsfrgtnsyd apgstnlgis
     2281 tssdismgsg sskssslenq fsgtfskvfa fgdsytdtgn aqslgilkdf asaflssffq
     2341 tidsnlhfeg rssngrlvid flcdslnisl lppfevaskn ssinedcgvn favggstsls
     2401 gdfftnhkit nnllwqgtpl gfqtqiewfn qfvtkkvcng etveqckeqm gnnliwlgqm
     2461 gaddfarvig ssislrwltd itlgqiskil ttvldsgarf ivvqglpplg cwplaklltp
     2521 hfakdemgcs avinkaimah ndllqktlee frrnypnati ayadyfnafk tvmgnltefg
     2581 fsdgsgaccg vggglnfnln nlcgmdgtnt csnpnayihw dgihlteamn kqiarlflle
     2641 gfcqpsfvdl ikrhqsllqp slq
//
LOCUS       XP_040943339            2655 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040943339
VERSION     XP_040943339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087405.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2655
                     /product="serine-rich adhesin for platelets isoform X9"
                     /calculated_mol_wt=261464
     Region          1100..2318
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1158..>1511
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <1422..>1761
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2300..2630
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2306,2387,2455,2613,2616)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2306,2613,2616)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2306,2387,2455)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2655
                     /gene="LOC107922274"
                     /coded_by="XM_041087405.1:56..8023"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvsgiskas stknesasmg tnasatngpt tfiptspstg sdgsksstsn psgtstsvtn
     1141 gptastpsss pstgvssftt nshkgsghts ssnfahsgsf tasghssash sygfkasgss
     1201 sgsegyksst sdspvsgnsk asstknesas mgtdasatng sttfiptsps tgsdgsksst
     1261 snpsgtstsv tngptastps sspstgvnsf ttnnhkgsgh tsssnfahsg sftasghssa
     1321 shsygfkasg sssgsegyks stsdssvsgn skasstknes asmgtnasat ngsttfipts
     1381 pstgsdgsks stsnpsgtst svtngptast pssspstgvs sfttnshtgs ghtsssnfah
     1441 sgsftasghs sashsygfka sgsssgsegy ksstsdssvs gnskasstkn esasmgtdas
     1501 atngsttfip tspstgsdgs ksstsnpsgt stsvtngpta stpssspstd sghssashss
     1561 gfkasgfssg segsksstsd ssvsgiskas stknesasmg tnasatngpt tfiptspstg
     1621 segsksstsn psatstkdtg astgtstsmt ngptasshss ashssgfktp gsststsssm
     1681 angpttsght pspsestiss tnsgssvgig sstsshsttn nesgsktsgf stntdssenn
     1741 ghksfsstls pstgtsshht nnpitshhtd lglsahtssf ftssdsstsn dfgsknsgss
     1801 lntssstpfg sssspstsig spesnshmas nhsnsgyskh tgssttsghs stgnsfgskt
     1861 sssstnigsa ttdghtatgs tlsassgfss hktnshmtss htksssstht gssshtgslt
     1921 tsgsktsgss tntgsattdg sattgsilsh ssgssshktn shmssghtks gssthtgssk
     1981 htgsfttsgs ktsgsststg stttnghatt gsatidghet tssisshssg ssshktnshs
     2041 tsaptkscsc tctptdssnh tgsattdght ttgsisshss gssshktnsh ttsahtksgs
     2101 sthtgsskht gsfktsgski sgsstntgsa ttgghtttgs isshssgsts hksnshttst
     2161 htksgsstht gsskhtgsft tsghsstssd fgsktsgssk stsssknndh vtsgstssps
     2221 idygspmtss tttsghtnse sstsnnfgsk tsgsfrgtns ydapgstnlg istssdismg
     2281 sgssksssle nqfsgtfskv fafgdsytdt gnaqslgilk dfasaflssf fqtidsnlhf
     2341 egrssngrlv idflcdslni sllppfevas knssinedcg vnfavggsts lsgdfftnhk
     2401 itnnllwqgt plgfqtqiew fnqfvtkkvc ngetveqcke qmgnnliwlg qmgaddfarv
     2461 igssislrwl tditlgqisk ilttvldsga rfivvqglpp lgcwplakll tphfakdemg
     2521 csavinkaim ahndllqktl eefrrnypna tiayadyfna fktvmgnlte fgfsdgsgac
     2581 cgvggglnfn lnnlcgmdgt ntcsnpnayi hwdgihltea mnkqiarlfl legfcqpsfv
     2641 dlikrhqsll qpslq
//
LOCUS       XP_040943341            2633 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X10 [Gossypium hirsutum].
ACCESSION   XP_040943341
VERSION     XP_040943341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087407.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2633
                     /product="serine-rich adhesin for platelets isoform X10"
                     /calculated_mol_wt=258837
     Region          <1163..1939
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1191..>1544
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2278..2608
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2284,2365,2433,2591,2594)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2284,2591,2594)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2284,2365,2433)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2633
                     /gene="LOC107922274"
                     /coded_by="XM_041087407.1:55..7956"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg tsssvtngst
     1081 tstpppsppk gdgyskasss ssgsegykss tsdssvsgis kasstknesa smgtnasatn
     1141 gpttfiptsp stgsdgskss tsnpsgtsts vtngptastp ssspstgvss fttnshkgsg
     1201 htsssnfahs gsftasghss ashsygfkas gsssgsegyk sstsdspvsg nskasstkne
     1261 sasmgtdasa tngsttfipt spstgsdgsk sstsnpsgts tsvtngptas tpssspstgv
     1321 nsfttnnhkg sghtsssnfa hsgsftasgh ssashsygfk asgsssgseg yksstsdssv
     1381 sgnskasstk nesasmgtna satngsttfi ptspstgsdg sksstsnpsg tstsvtngpt
     1441 astpssspst gvssfttnsh tgsghtsssn fahsgsftas ghssashsyg fkasgsssgs
     1501 egyksstsds svsgnskass tknesasmgt dasatngstt fiptspstgs dgsksstsnp
     1561 sgtstsvtng ptastpsssp stdsghssas hssgfkasgf ssgsegskss tsdssvsgis
     1621 kasstknesa smgtnasatn gpttfiptsp stgsegskss tsnpsgtsts mtngptassh
     1681 ssashssgfk tpgsststss smangpttsg htpspsesti sstnsgssvg igsstsshst
     1741 tnnesgskts gfstntdsse nnghksfsst lspstgssln tssstpfgss sspstsigsp
     1801 esnshmasnh snsgyskhtg ssttsghsst gnsfgsktss sstnigsatt dghtatgstl
     1861 sassgfsshk tnshmtssht kssssthtgs sshtgsltts gsktsgsstn tgsattdgsa
     1921 ttgsilshss gssshktnsh mssghtksgs sthtgsskht gsfttsgskt sgsststgst
     1981 ttnghattgs atidghetts sisshssgss shktnshsts aptkscsctc tptdssnhtg
     2041 sattdghttt gsisshssgs sshktnshtt sahtksgsst htgsskhtgs fktsgskisg
     2101 sstntgsatt gghtttgsis shssgstshk snshttstht ksgssthtgs skhtgsftts
     2161 ghsstssdfg sktsgsskst sssknndhvt sgstsspsid ygspmtsstt tsghtnsess
     2221 tsnnfgskts gsfrgtnsyd apgstnlgis tssdismgsg sskssslenq fsgtfskvfa
     2281 fgdsytdtgn aqslgilkdf asaflssffq tidsnlhfeg rssngrlvid flcdslnisl
     2341 lppfevaskn ssinedcgvn favggstsls gdfftnhkit nnllwqgtpl gfqtqiewfn
     2401 qfvtkkvcng etveqckeqm gnnliwlgqm gaddfarvig ssislrwltd itlgqiskil
     2461 ttvldsgarf ivvqglpplg cwplaklltp hfakdemgcs avinkaimah ndllqktlee
     2521 frrnypnati ayadyfnafk tvmgnltefg fsdgsgaccg vggglnfnln nlcgmdgtnt
     2581 csnpnayihw dgihlteamn kqiarlflle gfcqpsfvdl ikrhqsllqp slq
//
LOCUS       XP_040943342            2512 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X11 [Gossypium hirsutum].
ACCESSION   XP_040943342
VERSION     XP_040943342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087408.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2512
                     /product="serine-rich adhesin for platelets isoform X11"
                     /calculated_mol_wt=247626
     Region          <828..1614
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1015..>1368
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2157..2487
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2163,2244,2312,2470,2473)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2163,2470,2473)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2163,2244,2312)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2512
                     /gene="LOC107922274"
                     /coded_by="XM_041087408.1:55..7593"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgtsssvt
      901 ngsttstppp sppkgdgysk asssssgseg yksstsdssv sgiskasstk nesasmgtna
      961 satngpttfi ptspstgsdg sksstsnpsg tstsvtngpt astpssspst gvssfttnsh
     1021 kgsghtsssn fahsgsftas ghssashsyg fkasgsssgs egyksstsds pvsgnskass
     1081 tknesasmgt dasatngstt fiptspstgs dgsksstsnp sgtstsvtng ptastpsssp
     1141 stgvnsfttn nhkgsghtss snfahsgsft asghssashs ygfkasgsss gsegykssts
     1201 dssvsgnska sstknesasm gtnasatngs ttfiptspst gsdgskssts npsgtstsvt
     1261 ngptastpss spstgvssft tnshtgsght sssnfahsgs ftasghssas hsygfkasgs
     1321 ssgsegykss tsdssvsgns kasstknesa smgtdasatn gsttfiptsp stgsdgskss
     1381 tsnpsgtsts vtngptastp ssspstdsgh ssashssgfk asgfssgseg sksstsdssv
     1441 sgiskasstk nesasmgtna satngpttfi ptspstgseg sksstsnpsa tstkdtgast
     1501 gtstsmtngp tasshssash ssgfktpgss tstsssmang pttsghtpsp sestisstns
     1561 gssvgigsst sshsttnnes gsktsgfstn tdssennghk sfsstlspst gtsshhtnnp
     1621 itshhtdlgl sahtssffts sdsstsndfg sknsgsslnt ssstpfgsss spstsigspe
     1681 snshmasnhs nsgyskhtgs sttsghsstg nsfgsktsss stnigsattd ghtatgstls
     1741 assgfsshkt nshmtsshtk ssssthtgss shtgslttsg sktsgsstnt gsattdgsat
     1801 tgsilshssg ssshktnshm ssghtksgss thtgsskhtg sfttsgskts gsststgstt
     1861 tnghattgsa tidghettss isshssgsss hktnshstsa ptkscsctct ptdssnhtgs
     1921 attdghtttg sisshssgss shktnshtts ahtksgssth tgsskhtgsf ktsgskisgs
     1981 stntgsattg ghtttgsiss hssgstshks nshttsthtk sgssthtgss khtgsfttsg
     2041 hsstssdfgs ktsgssksts ssknndhvts gstsspsidy gspmtssttt sghtnsesst
     2101 snnfgsktsg sfrgtnsyda pgstnlgist ssdismgsgs skssslenqf sgtfskvfaf
     2161 gdsytdtgna qslgilkdfa saflssffqt idsnlhfegr ssngrlvidf lcdslnisll
     2221 ppfevaskns sinedcgvnf avggstslsg dfftnhkitn nllwqgtplg fqtqiewfnq
     2281 fvtkkvcnge tveqckeqmg nnliwlgqmg addfarvigs sislrwltdi tlgqiskilt
     2341 tvldsgarfi vvqglpplgc wplaklltph fakdemgcsa vinkaimahn dllqktleef
     2401 rrnypnatia yadyfnafkt vmgnltefgf sdgsgaccgv ggglnfnlnn lcgmdgtntc
     2461 snpnayihwd gihlteamnk qiarlflleg fcqpsfvdli krhqsllqps lq
//
LOCUS       XP_040943343            2454 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X12 [Gossypium hirsutum].
ACCESSION   XP_040943343
VERSION     XP_040943343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087409.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2454
                     /product="serine-rich adhesin for platelets isoform X12"
                     /calculated_mol_wt=242301
     Region          <1153..>1453
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          2099..2429
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(2105,2186,2254,2412,2415)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(2105,2412,2415)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(2105,2186,2254)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2454
                     /gene="LOC107922274"
                     /coded_by="XM_041087409.1:56..7420"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 vtngptastp ssspstgvss fttnshkgsg htsssnfahs gsftasghss ashsygfkas
     1261 gsssgsegyk sstsdspvsg nskasstkne sasmgtdasa tngsttfipt spstgsdgsk
     1321 sstsnpsgts tsvtngptas tpssspstds ghssashssg fkasgfssgs egsksstsds
     1381 svsgiskass tknesasmgt nasatngptt fiptspstgs egsksstsnp satstkdtga
     1441 stgtstsmtn gptasshssa shssgfktpg sststsssma ngpttsghtp spsestisst
     1501 nsgssvgigs stsshsttnn esgsktsgfs tntdssenng hksfsstlsp stgtsshhtn
     1561 npitshhtdl glsahtssff tssdsstsnd fgsknsgssl ntssstpfgs ssspstsigs
     1621 pesnshmasn hsnsgyskht gssttsghss tgnsfgskts ssstnigsat tdghtatgst
     1681 lsassgfssh ktnshmtssh tkssssthtg ssshtgsltt sgsktsgsst ntgsattdgs
     1741 attgsilshs sgssshktns hmssghtksg ssthtgsskh tgsfttsgsk tsgsststgs
     1801 tttnghattg satidghett ssisshssgs sshktnshst saptkscsct ctptdssnht
     1861 gsattdghtt tgsisshssg ssshktnsht tsahtksgss thtgsskhtg sfktsgskis
     1921 gsstntgsat tgghtttgsi sshssgstsh ksnshttsth tksgssthtg sskhtgsftt
     1981 sghsstssdf gsktsgssks tsssknndhv tsgstsspsi dygspmtsst ttsghtnses
     2041 stsnnfgskt sgsfrgtnsy dapgstnlgi stssdismgs gsskssslen qfsgtfskvf
     2101 afgdsytdtg naqslgilkd fasaflssff qtidsnlhfe grssngrlvi dflcdslnis
     2161 llppfevask nssinedcgv nfavggstsl sgdfftnhki tnnllwqgtp lgfqtqiewf
     2221 nqfvtkkvcn getveqckeq mgnnliwlgq mgaddfarvi gssislrwlt ditlgqiski
     2281 lttvldsgar fivvqglppl gcwplakllt phfakdemgc savinkaima hndllqktle
     2341 efrrnypnat iayadyfnaf ktvmgnltef gfsdgsgacc gvggglnfnl nnlcgmdgtn
     2401 tcsnpnayih wdgihlteam nkqiarlfll egfcqpsfvd likrhqsllq pslq
//
LOCUS       XP_040943344            2268 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X13 [Gossypium hirsutum].
ACCESSION   XP_040943344
VERSION     XP_040943344.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087410.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2268
                     /product="serine-rich adhesin for platelets isoform X13"
                     /calculated_mol_wt=224674
     Region          <1152..>1374
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1913..2243
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1919,2000,2068,2226,2229)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1919,2226,2229)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1919,2000,2068)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2268
                     /gene="LOC107922274"
                     /coded_by="XM_041087410.1:56..6862"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsegskss tsdssvsgis
     1201 kasstknesa smgtnasatn gpttfiptsp stgsegskss tsnpsatstk dtgastgtst
     1261 smtngptass hssashssgf ktpgsststs ssmangptts ghtpspsest isstnsgssv
     1321 gigsstsshs ttnnesgskt sgfstntdss ennghksfss tlspstgtss hhtnnpitsh
     1381 htdlglsaht ssfftssdss tsndfgskns gsslntssst pfgsssspst sigspesnsh
     1441 masnhsnsgy skhtgsstts ghsstgnsfg sktsssstni gsattdghta tgstlsassg
     1501 fsshktnshm tsshtkssss thtgssshtg slttsgskts gsstntgsat tdgsattgsi
     1561 lshssgsssh ktnshmssgh tksgssthtg sskhtgsftt sgsktsgsst stgstttngh
     1621 attgsatidg hettssissh ssgssshktn shstsaptks csctctptds snhtgsattd
     1681 ghtttgsiss hssgssshkt nshttsahtk sgssthtgss khtgsfktsg skisgsstnt
     1741 gsattgghtt tgsisshssg stshksnsht tsthtksgss thtgsskhtg sfttsghsst
     1801 ssdfgsktsg sskstssskn ndhvtsgsts spsidygspm tsstttsght nsesstsnnf
     1861 gsktsgsfrg tnsydapgst nlgistssdi smgsgsskss slenqfsgtf skvfafgdsy
     1921 tdtgnaqslg ilkdfasafl ssffqtidsn lhfegrssng rlvidflcds lnisllppfe
     1981 vasknssine dcgvnfavgg stslsgdfft nhkitnnllw qgtplgfqtq iewfnqfvtk
     2041 kvcngetveq ckeqmgnnli wlgqmgaddf arvigssisl rwltditlgq iskilttvld
     2101 sgarfivvqg lpplgcwpla klltphfakd emgcsavink aimahndllq ktleefrrny
     2161 pnatiayady fnafktvmgn ltefgfsdgs gaccgvgggl nfnlnnlcgm dgtntcsnpn
     2221 ayihwdgihl teamnkqiar lfllegfcqp sfvdlikrhq sllqpslq
//
LOCUS       XP_040943345            2218 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X14 [Gossypium hirsutum].
ACCESSION   XP_040943345
VERSION     XP_040943345.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087411.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2218
                     /product="serine-rich adhesin for platelets isoform X14"
                     /calculated_mol_wt=219907
     Region          <1153..>1320
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1863..2193
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1869,1950,2018,2176,2179)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1869,2176,2179)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1869,1950,2018)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2218
                     /gene="LOC107922274"
                     /coded_by="XM_041087411.1:56..6712"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsegskss tsnpsatstk
     1201 dtgastgtst smtngptass hssashssgf ktpgsststs ssmangptts ghtpspsest
     1261 isstnsgssv gigsstsshs ttnnesgskt sgfstntdss ennghksfss tlspstgtss
     1321 hhtnnpitsh htdlglsaht ssfftssdss tsndfgskns gsslntssst pfgsssspst
     1381 sigspesnsh masnhsnsgy skhtgsstts ghsstgnsfg sktsssstni gsattdghta
     1441 tgstlsassg fsshktnshm tsshtkssss thtgssshtg slttsgskts gsstntgsat
     1501 tdgsattgsi lshssgsssh ktnshmssgh tksgssthtg sskhtgsftt sgsktsgsst
     1561 stgstttngh attgsatidg hettssissh ssgssshktn shstsaptks csctctptds
     1621 snhtgsattd ghtttgsiss hssgssshkt nshttsahtk sgssthtgss khtgsfktsg
     1681 skisgsstnt gsattgghtt tgsisshssg stshksnsht tsthtksgss thtgsskhtg
     1741 sfttsghsst ssdfgsktsg sskstssskn ndhvtsgsts spsidygspm tsstttsght
     1801 nsesstsnnf gsktsgsfrg tnsydapgst nlgistssdi smgsgsskss slenqfsgtf
     1861 skvfafgdsy tdtgnaqslg ilkdfasafl ssffqtidsn lhfegrssng rlvidflcds
     1921 lnisllppfe vasknssine dcgvnfavgg stslsgdfft nhkitnnllw qgtplgfqtq
     1981 iewfnqfvtk kvcngetveq ckeqmgnnli wlgqmgaddf arvigssisl rwltditlgq
     2041 iskilttvld sgarfivvqg lpplgcwpla klltphfakd emgcsavink aimahndllq
     2101 ktleefrrny pnatiayady fnafktvmgn ltefgfsdgs gaccgvgggl nfnlnnlcgm
     2161 dgtntcsnpn ayihwdgihl teamnkqiar lfllegfcqp sfvdlikrhq sllqpslq
//
LOCUS       XP_040943346            2207 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X15 [Gossypium hirsutum].
ACCESSION   XP_040943346
VERSION     XP_040943346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087412.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2207
                     /product="serine-rich adhesin for platelets isoform X15"
                     /calculated_mol_wt=218886
     Region          1852..2182
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1858,1939,2007,2165,2168)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1858,2165,2168)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1858,1939,2007)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2207
                     /gene="LOC107922274"
                     /coded_by="XM_041087412.1:55..6678"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsegskss tsnpsgtsts
     1201 mtngptassh ssashssgfk tpgsststss smangpttsg htpspsesti sstnsgssvg
     1261 igsstsshst tnnesgskts gfstntdsse nnghksfsst lspstgtssh htnnpitshh
     1321 tdlglsahts sfftssdsst sndfgsknsg sslntssstp fgsssspsts igspesnshm
     1381 asnhsnsgys khtgssttsg hsstgnsfgs ktsssstnig sattdghtat gstlsassgf
     1441 sshktnshmt sshtksssst htgssshtgs lttsgsktsg sstntgsatt dgsattgsil
     1501 shssgssshk tnshmssght ksgssthtgs skhtgsftts gsktsgssts tgstttngha
     1561 ttgsatidgh ettssisshs sgssshktns hstsaptksc sctctptdss nhtgsattdg
     1621 htttgsissh ssgssshktn shttsahtks gssthtgssk htgsfktsgs kisgsstntg
     1681 sattgghttt gsisshssgs tshksnshtt sthtksgsst htgsskhtgs fttsghssts
     1741 sdfgsktsgs skstsssknn dhvtsgstss psidygspmt sstttsghtn sesstsnnfg
     1801 sktsgsfrgt nsydapgstn lgistssdis mgsgssksss lenqfsgtfs kvfafgdsyt
     1861 dtgnaqslgi lkdfasafls sffqtidsnl hfegrssngr lvidflcdsl nisllppfev
     1921 asknssined cgvnfavggs tslsgdfftn hkitnnllwq gtplgfqtqi ewfnqfvtkk
     1981 vcngetveqc keqmgnnliw lgqmgaddfa rvigssislr wltditlgqi skilttvlds
     2041 garfivvqgl pplgcwplak lltphfakde mgcsavinka imahndllqk tleefrrnyp
     2101 natiayadyf nafktvmgnl tefgfsdgsg accgvgggln fnlnnlcgmd gtntcsnpna
     2161 yihwdgihlt eamnkqiarl fllegfcqps fvdlikrhqs llqpslq
//
LOCUS       XP_040943347            2207 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X16 [Gossypium hirsutum].
ACCESSION   XP_040943347
VERSION     XP_040943347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087413.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2207
                     /product="serine-rich adhesin for platelets isoform X16"
                     /calculated_mol_wt=218872
     Region          1852..2182
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1858,1939,2007,2165,2168)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1858,2165,2168)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1858,1939,2007)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2207
                     /gene="LOC107922274"
                     /coded_by="XM_041087413.1:55..6678"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 mtngptassh ssashssgfk tpgsststss smangpttsg htpspsesti sstnsgssvg
     1261 igsstsshst tnnesgskts gfstntdsse nnghksfsst lspstgtssh htnnpitshh
     1321 tdlglsahts sfftssdsst sndfgsknsg sslntssstp fgsssspsts igspesnshm
     1381 asnhsnsgys khtgssttsg hsstgnsfgs ktsssstnig sattdghtat gstlsassgf
     1441 sshktnshmt sshtksssst htgssshtgs lttsgsktsg sstntgsatt dgsattgsil
     1501 shssgssshk tnshmssght ksgssthtgs skhtgsftts gsktsgssts tgstttngha
     1561 ttgsatidgh ettssisshs sgssshktns hstsaptksc sctctptdss nhtgsattdg
     1621 htttgsissh ssgssshktn shttsahtks gssthtgssk htgsfktsgs kisgsstntg
     1681 sattgghttt gsisshssgs tshksnshtt sthtksgsst htgsskhtgs fttsghssts
     1741 sdfgsktsgs skstsssknn dhvtsgstss psidygspmt sstttsghtn sesstsnnfg
     1801 sktsgsfrgt nsydapgstn lgistssdis mgsgssksss lenqfsgtfs kvfafgdsyt
     1861 dtgnaqslgi lkdfasafls sffqtidsnl hfegrssngr lvidflcdsl nisllppfev
     1921 asknssined cgvnfavggs tslsgdfftn hkitnnllwq gtplgfqtqi ewfnqfvtkk
     1981 vcngetveqc keqmgnnliw lgqmgaddfa rvigssislr wltditlgqi skilttvlds
     2041 garfivvqgl pplgcwplak lltphfakde mgcsavinka imahndllqk tleefrrnyp
     2101 natiayadyf nafktvmgnl tefgfsdgsg accgvgggln fnlnnlcgmd gtntcsnpna
     2161 yihwdgihlt eamnkqiarl fllegfcqps fvdlikrhqs llqpslq
//
LOCUS       XP_040943348            2205 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X17 [Gossypium hirsutum].
ACCESSION   XP_040943348
VERSION     XP_040943348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087414.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2205
                     /product="serine-rich adhesin for platelets isoform X17"
                     /calculated_mol_wt=218592
     Region          <1089..>1311
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1850..2180
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1856,1937,2005,2163,2166)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1856,2163,2166)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1856,1937,2005)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2205
                     /gene="LOC107922274"
                     /coded_by="XM_041087414.1:56..6673"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvsgiskas stknesasmg tnasatngpt tfiptspstg segsksstsd ssvsgiskas
     1141 stknesasmg tnasatngpt tfiptspstg segsksstsn psatstkdtg astgtstsmt
     1201 ngptasshss ashssgfktp gsststsssm angpttsght pspsestiss tnsgssvgig
     1261 sstsshsttn nesgsktsgf stntdssenn ghksfsstls pstgtsshht nnpitshhtd
     1321 lglsahtssf ftssdsstsn dfgsknsgss lntssstpfg sssspstsig spesnshmas
     1381 nhsnsgyskh tgssttsghs stgnsfgskt sssstnigsa ttdghtatgs tlsassgfss
     1441 hktnshmtss htksssstht gssshtgslt tsgsktsgss tntgsattdg sattgsilsh
     1501 ssgssshktn shmssghtks gssthtgssk htgsfttsgs ktsgsststg stttnghatt
     1561 gsatidghet tssisshssg ssshktnshs tsaptkscsc tctptdssnh tgsattdght
     1621 ttgsisshss gssshktnsh ttsahtksgs sthtgsskht gsfktsgski sgsstntgsa
     1681 ttgghtttgs isshssgsts hksnshttst htksgsstht gsskhtgsft tsghsstssd
     1741 fgsktsgssk stsssknndh vtsgstssps idygspmtss tttsghtnse sstsnnfgsk
     1801 tsgsfrgtns ydapgstnlg istssdismg sgssksssle nqfsgtfskv fafgdsytdt
     1861 gnaqslgilk dfasaflssf fqtidsnlhf egrssngrlv idflcdslni sllppfevas
     1921 knssinedcg vnfavggsts lsgdfftnhk itnnllwqgt plgfqtqiew fnqfvtkkvc
     1981 ngetveqcke qmgnnliwlg qmgaddfarv igssislrwl tditlgqisk ilttvldsga
     2041 rfivvqglpp lgcwplakll tphfakdemg csavinkaim ahndllqktl eefrrnypna
     2101 tiayadyfna fktvmgnlte fgfsdgsgac cgvggglnfn lnnlcgmdgt ntcsnpnayi
     2161 hwdgihltea mnkqiarlfl legfcqpsfv dlikrhqsll qpslq
//
LOCUS       XP_040943349            2174 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X18 [Gossypium hirsutum].
ACCESSION   XP_040943349
VERSION     XP_040943349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087415.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2174
                     /product="serine-rich adhesin for platelets isoform X18"
                     /calculated_mol_wt=215760
     Region          1819..2149
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1825,1906,1974,2132,2135)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1825,2132,2135)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1825,1906,1974)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2174
                     /gene="LOC107922274"
                     /coded_by="XM_041087415.1:56..6580"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsdgskss tsnpsgtsts
     1201 mtngptassh ssashssgfk tpgssvgigs stsshsttnn esgsktsgfs tntdssenng
     1261 hksfsstlsp stgtsshhtn npitshhtdl glsahtssff tssdsstsnd fgsknsgssl
     1321 ntssstpfgs ssspstsigs pesnshmasn hsnsgyskht gssttsghss tgnsfgskts
     1381 ssstnigsat tdghtatgst lsassgfssh ktnshmtssh tkssssthtg ssshtgsltt
     1441 sgsktsgsst ntgsattdgs attgsilshs sgssshktns hmssghtksg ssthtgsskh
     1501 tgsfttsgsk tsgsststgs tttnghattg satidghett ssisshssgs sshktnshst
     1561 saptkscsct ctptdssnht gsattdghtt tgsisshssg ssshktnsht tsahtksgss
     1621 thtgsskhtg sfktsgskis gsstntgsat tgghtttgsi sshssgstsh ksnshttsth
     1681 tksgssthtg sskhtgsftt sghsstssdf gsktsgssks tsssknndhv tsgstsspsi
     1741 dygspmtsst ttsghtnses stsnnfgskt sgsfrgtnsy dapgstnlgi stssdismgs
     1801 gsskssslen qfsgtfskvf afgdsytdtg naqslgilkd fasaflssff qtidsnlhfe
     1861 grssngrlvi dflcdslnis llppfevask nssinedcgv nfavggstsl sgdfftnhki
     1921 tnnllwqgtp lgfqtqiewf nqfvtkkvcn getveqckeq mgnnliwlgq mgaddfarvi
     1981 gssislrwlt ditlgqiski lttvldsgar fivvqglppl gcwplakllt phfakdemgc
     2041 savinkaima hndllqktle efrrnypnat iayadyfnaf ktvmgnltef gfsdgsgacc
     2101 gvggglnfnl nnlcgmdgtn tcsnpnayih wdgihlteam nkqiarlfll egfcqpsfvd
     2161 likrhqsllq pslq
//
LOCUS       XP_040943350            2174 aa            linear   PLN 06-AUG-2024
DEFINITION  serine-rich adhesin for platelets isoform X19 [Gossypium hirsutum].
ACCESSION   XP_040943350
VERSION     XP_040943350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087416.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2174
                     /product="serine-rich adhesin for platelets isoform X19"
                     /calculated_mol_wt=215774
     Region          1819..2149
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(1825,1906,1974,2132,2135)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(1825,2132,2135)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(1825,1906,1974)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..2174
                     /gene="LOC107922274"
                     /coded_by="XM_041087416.1:56..6580"
                     /db_xref="GeneID:107922274"
ORIGIN      
        1 mmiskhffhv lsivlflsfs fpyahftgid qdstnlhplp vslgsssfss sgsfkhssss
       61 hasqsfkssh slkssenhgd asghgsssms hsssasgsss hssssshsgs fkssgsfkgs
      121 sspvdsnnsk dsglghgdss ssttssslsg sshskssksl shssssshsg swkgsssfed
      181 snnskdsslg hgdsrssgts sslsgsshsk sssslshsss sshygswkgs gsfgdsnksk
      241 dsssamaths slgsgdnfsn skgsdssets ksgnssslsg sinsmgsnss ktfnsalgst
      301 asnsskssss nnskdsssat asgsssslgs snskasglsa hssfekhgsa tghgssslsh
      361 svsasgsssh sgsyshssss shsssfkhsn sgssssstns gsnnfkdsss daashsslsq
      421 gasntvssss shsnslnhgg stshgsssls hssstsgsss ksslssdsgs satnsstnsg
      481 snnskdsdst ttsqsslnhk asnssassss lsgssnykvs glsansssss hsgssaanss
      541 insgsnhskd sdsttasqss lnhgasssst ssdslsgsns skafgsssds ssfkhsgsga
      601 snsstnigsn nsndsvstaa sqstlnhgas nsssssgsls gssnykaygs ssnsissshs
      661 gsfnhfgsia gnsstnsgsn sskgsdstta sqsslnhkas nssassgsls gsrnykasgs
      721 ssnsslsshs gsfkhsgssa ansstnsgln nskdssptta skssleheas gsstssasls
      781 gssnskasgf sshsnsinhg gatghssfsl shsssashss syshsgsfeh sgsfkgsgss
      841 vdssnskdsg sgathsssss gasgsstsss slsgfnkstn sktsdsslsh dasgsstslg
      901 snnskdskss snsgtssssa dsnslsgfnn skgsgsfqts nsssnlsasg sstgsnslsn
      961 snnskgsnns kssktsssss dldasssskg fgsdnsqssd fsqtsqsgss gsttglgsfs
     1021 ssnnskssds sktsnssssy dahgsgsgsv sssnnskgfg ssktsgsssg snrykssmsd
     1081 ssvcgnskss rtkntsactg tsssvtngst tstpppsppk gdgyskasss ssgsegykss
     1141 tsdssvsgis kasstknesa smgtnasatn gpttfiptsp stgsegskss tsnpsgtsts
     1201 mtngptassh ssashssgfk tpgssvgigs stsshsttnn esgsktsgfs tntdssenng
     1261 hksfsstlsp stgtsshhtn npitshhtdl glsahtssff tssdsstsnd fgsknsgssl
     1321 ntssstpfgs ssspstsigs pesnshmasn hsnsgyskht gssttsghss tgnsfgskts
     1381 ssstnigsat tdghtatgst lsassgfssh ktnshmtssh tkssssthtg ssshtgsltt
     1441 sgsktsgsst ntgsattdgs attgsilshs sgssshktns hmssghtksg ssthtgsskh
     1501 tgsfttsgsk tsgsststgs tttnghattg satidghett ssisshssgs sshktnshst
     1561 saptkscsct ctptdssnht gsattdghtt tgsisshssg ssshktnsht tsahtksgss
     1621 thtgsskhtg sfktsgskis gsstntgsat tgghtttgsi sshssgstsh ksnshttsth
     1681 tksgssthtg sskhtgsftt sghsstssdf gsktsgssks tsssknndhv tsgstsspsi
     1741 dygspmtsst ttsghtnses stsnnfgskt sgsfrgtnsy dapgstnlgi stssdismgs
     1801 gsskssslen qfsgtfskvf afgdsytdtg naqslgilkd fasaflssff qtidsnlhfe
     1861 grssngrlvi dflcdslnis llppfevask nssinedcgv nfavggstsl sgdfftnhki
     1921 tnnllwqgtp lgfqtqiewf nqfvtkkvcn getveqckeq mgnnliwlgq mgaddfarvi
     1981 gssislrwlt ditlgqiski lttvldsgar fivvqglppl gcwplakllt phfakdemgc
     2041 savinkaima hndllqktle efrrnypnat iayadyfnaf ktvmgnltef gfsdgsgacc
     2101 gvggglnfnl nnlcgmdgtn tcsnpnayih wdgihlteam nkqiarlfll egfcqpsfvd
     2161 likrhqsllq pslq
//
LOCUS       XP_016701409             480 aa            linear   PLN 06-AUG-2024
DEFINITION  probable carboxylesterase 16 [Gossypium hirsutum].
ACCESSION   XP_016701409
VERSION     XP_016701409.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016701409.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="probable carboxylesterase 16"
                     /calculated_mol_wt=53756
     Region          193..445
                     /region_name="Abhydrolase_3"
                     /note="alpha/beta hydrolase fold; pfam07859"
                     /db_xref="CDD:400284"
     CDS             1..480
                     /gene="LOC107916615"
                     /coded_by="XM_016845920.2:21..1463"
                     /db_xref="GeneID:107916615"
ORIGIN      
        1 myileinqlr kflfefflai itaaikkspf dafktfneln psisdrhqwr qryptsfefh
       61 sssklsmlft illfsskmps lavklysiff kfqqrymlhn ltqnpvhavd pfgitsrree
      121 staasnpsfy egvatkdihi dpfsslciri flpatvvnfd pttiiedksk dgafiysgys
      181 pqagtkhkkl pvvlqfhgga fvggsndsvr ndafcrrian lcdvivvavg yrlapesryp
      241 aafddglkvl nwlakeanla ecgkwmgngn gngrrradah vfdgfgasma epwlaahgdp
      301 srcvllgvss ganiadyvar kaveagklld pvkvvaqvlm ypffigsnpt aseiklansy
      361 fydksvcmqt wklflpeekf dldhpaanpl ipgrepplkf mpptltvvae qdwmrdraia
      421 yseelrrani daplleykda vhefatldvl lqtpqaqaca ediaiwvkky islrghefsy
//
LOCUS       XP_016707231             207 aa            linear   PLN 06-AUG-2024
DEFINITION  mitotic spindle checkpoint protein MAD2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707231
VERSION     XP_016707231.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851742.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="mitotic spindle checkpoint protein MAD2 isoform
                     X1"
                     /calculated_mol_wt=23424
     Region          16..191
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..207
                     /gene="LOC107921942"
                     /coded_by="XM_016851742.2:306..929"
                     /db_xref="GeneID:107921942"
ORIGIN      
        1 masrtvakdi itlrgsaaiv seffgyaans ilynrgvype esfakvkkyg lpmlltqdeg
       61 vksfitnlta qlsewleagk lqrvvmvims katkevlerw nfsietdsdv vekgvsreks
      121 dreimreiqa imrqiassit ylpcldepcv fdvlaytdtd vpvpftwies dpklianpqm
      181 vklhsfdtki hkvdtlvsyk ndewdeq
//
LOCUS       XP_040943352             195 aa            linear   PLN 06-AUG-2024
DEFINITION  mitotic spindle checkpoint protein MAD2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943352
VERSION     XP_040943352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087418.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..195
                     /product="mitotic spindle checkpoint protein MAD2 isoform
                     X2"
                     /calculated_mol_wt=21893
     Region          16..189
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..195
                     /gene="LOC107921942"
                     /coded_by="XM_041087418.1:306..893"
                     /db_xref="GeneID:107921942"
ORIGIN      
        1 masrtvakdi itlrgsaaiv seffgyaans ilynrgvype esfakvkkyg lpmlltqdeg
       61 vksfitnlta qlsewleagk lqrvvmvims katkevlerw nfsietdsdv vekgvsreks
      121 dreimreiqa imrqiassit ylpcldepcv fdvlaytdtd vpvpftwies dpklianpqm
      181 vklhsfdtkk etqai
//
LOCUS       XP_040943353             118 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943353
VERSION     XP_040943353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087419.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..118
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13026
     CDS             1..118
                     /gene="LOC107921943"
                     /coded_by="XM_041087419.1:429..785"
                     /db_xref="GeneID:107921943"
ORIGIN      
        1 maracaasfp srgtnvhplp ppavgdpsya qkstlsckpe plprkgqqph qkmnfqkrep
       61 tpttiaryla eyhnstrgaq nsptqlytmd ipqlhieida pnfhseapsy etiakrvf
//
LOCUS       XP_016708062             945 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 5 [Gossypium
            hirsutum].
ACCESSION   XP_016708062
VERSION     XP_016708062.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852573.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708062.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..945
                     /product="LOW QUALITY PROTEIN: ATP-dependent DNA helicase
                     Q-like 5"
                     /calculated_mol_wt=105298
     Region          275..>646
                     /region_name="RecQ"
                     /note="Superfamily II DNA helicase RecQ [Replication,
                     recombination and repair]; COG0514"
                     /db_xref="CDD:440280"
     CDS             1..945
                     /gene="LOC107922502"
                     /coded_by="XM_016852573.2:104..2941"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107922502"
ORIGIN      
        1 mdadsdsdgs hisatpprdx tpaprlppqp ppkpptsyks tastkrsshl diifklkkps
       61 sskhdkiepv pepepkvkpi qqpdlpspvg nfpfqirrps dqphpisigr sletlpagff
      121 strrasfski ckpslnfepe tlpeitaepk ingsdgpgst ktcnkklpnl irgdvplppv
      181 klqkrseegn fvrlnfngyk rkftakgkkm nsysykskyf krskrrvkse vdtgslcdee
      241 glvseiklqs kaekpsrces veaaisavrn evsdenlvrl lkalygydlf rdgqleaikm
      301 ilagkstmlv lptgagkslc yqipavvlpg itlvvsplva lmidqlkqlp rmiqggllss
      361 sqgpeeaaet lrmvqegsik vlfvsperfl nadflsifst ltsvslvvvd eahcvsewsh
      421 nfrpsymrlr asllraklnv ecilamtata ttttlqsims aleisstnli qksqvrdnlr
      481 lsvslssnrm kdmlklmkss pflgaqsiiv yckfqsmyss qaisnfylhw ilqsetdvis
      541 rylcdnnisa ksyhsgmlar drsriqelfc ankirvvvat vafgmgidkr dvgavihysl
      601 pesleeyvqe igrggrdgrl sychlffddv tyyklrslmh sdgvdefavn kflcqvfadd
      661 tsshrkvcsl vkesasrkfd mkeevmltll thlelgetqy lhllpqlnvt ctlnfhktsp
      721 mlladkdtav aailkkseik qgqyvfdipt vansigvapg dlsnhlqnlk akgeityelk
      781 dpaycykivk vpsdfcslte lltrwlldie nckvwkldam yssavfvvdt cekthdcnva
      841 qqttclqeri ldyfkgdnnl dvldkmgqns pflradikvf lqsnsnvkft praiarimhg
      901 igspaypsst wsrthfwgry iqidfkavmn aakaelmnfv gkdap
//
LOCUS       XP_016708261             356 aa            linear   PLN 06-AUG-2024
DEFINITION  remorin 4.1 [Gossypium hirsutum].
ACCESSION   XP_016708261
VERSION     XP_016708261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852772.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..356
                     /product="remorin 4.1"
                     /calculated_mol_wt=39304
     Region          243..346
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..356
                     /gene="LOC107922646"
                     /coded_by="XM_016852772.2:886..1956"
                     /db_xref="GeneID:107922646"
ORIGIN      
        1 mraiedkgcy nlgaaneiss ssvsaisfqf hkgngttnnr aaqshqrttt algkpttpsk
       61 wddaqkwlvg lsrsrdkkth skakprnsna ddrrliapvp hkeqdypssd eeggfaaaav
      121 mspkyegetk kvdfddsiwn svsavrsicv rdmgtemtpi asqepsrttt plrattpagr
      181 spissgsstp vrcqhgggpc aedyqagsgp tstegraetn aaarghgsnr qesdqarkqs
      241 tletraiawd eaerakymar ykreevkiqa wenhekrkae vemkkievka erlkaraker
      301 yankvaatrr iaeekranae sklnekairt sqradyirrt ghfpssfsfk lpslcw
//
LOCUS       XP_016706520             245 aa            linear   PLN 06-AUG-2024
DEFINITION  adenylate kinase 4 [Gossypium hirsutum].
ACCESSION   XP_016706520
VERSION     XP_016706520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..245
                     /product="adenylate kinase 4"
                     /calculated_mol_wt=26595
     Region          1..244
                     /region_name="PLN02674"
                     /note="adenylate kinase"
                     /db_xref="CDD:178279"
     CDS             1..245
                     /gene="LOC107921158"
                     /coded_by="XM_016851031.2:107..844"
                     /db_xref="GeneID:107921158"
ORIGIN      
        1 madsavaled vasvdimtel lrrfkcsskp dkrliligpp gsgkgtqspm ikddyclchl
       61 atgdmlraav aaktplgika keamdkgelv sddlvvgiid eamkkpscqk gfildgfprt
      121 vvqaqkldem lgkqgtkidk vlnfaiddsi leeritgrwi hpssgrtyht kfappkvpgl
      181 ddvtgepliq rkddtpavlk srleafhrqt epvidyygsk gilanlpaek ppkevtsevq
      241 kvlss
//
LOCUS       XP_040943355             178 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L17-2 [Gossypium hirsutum].
ACCESSION   XP_040943355
VERSION     XP_040943355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087421.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..178
                     /product="60S ribosomal protein L17-2"
                     /calculated_mol_wt=19975
     Region          1..178
                     /region_name="PTZ00178"
                     /note="60S ribosomal protein L17; Provisional"
                     /db_xref="CDD:240306"
     Site            order(15..16,38..40,42..43,45..46,100..105,113..118,
                     150..151)
                     /site_type="active"
                     /note="putative translocon binding site [active]"
                     /db_xref="CDD:238205"
     Site            order(18,20,23,25..27,30,34,37,98,102,105,117,119..121,
                     123,126,138..143)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238205"
     CDS             1..178
                     /gene="LOC107920995"
                     /coded_by="XM_041087421.1:140..676"
                     /db_xref="GeneID:107920995"
ORIGIN      
        1 mvkyskesdn ptksckargs dlrvhfkntr etafairkla lgkaktyled vmahkqaipf
       61 rrfcggvgrt aqaknrhsng qgrwpvksak fildllknae snaevkgldv dalyishiqv
      121 nqaqkqrrrt yrahgrinpy msspchieli lsekeepvkk epetqlaask skksqvsv
//
LOCUS       XP_016706195              91 aa            linear   PLN 06-AUG-2024
DEFINITION  probable signal peptidase complex subunit 1 [Gossypium hirsutum].
ACCESSION   XP_016706195
VERSION     XP_016706195.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850706.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..91
                     /product="probable signal peptidase complex subunit 1"
                     /calculated_mol_wt=10079
     Region          1..71
                     /region_name="SPC12"
                     /note="Microsomal signal peptidase 12 kDa subunit (SPC12);
                     pfam06645"
                     /db_xref="CDD:461973"
     CDS             1..91
                     /gene="LOC107920887"
                     /coded_by="XM_016850706.2:160..435"
                     /db_xref="GeneID:107920887"
ORIGIN      
        1 mdwqgqklae qimqvmllvf avvsfgagyv lgsfqmmmlv yaggvtltal itipnwpffn
       61 rhplkwldps eaekhpkpqv avsskkkssk k
//
LOCUS       XP_016707650             382 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g67480 [Gossypium hirsutum].
ACCESSION   XP_016707650
VERSION     XP_016707650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..382
                     /product="F-box/kelch-repeat protein At1g67480"
                     /calculated_mol_wt=42322
     Region          45..89
                     /region_name="F-box_AtAFR-like"
                     /note="F-box domain found in Arabidopsis thaliana protein
                     ATTENUATED FAR-RED RESPONSE (AtAFR) and similar proteins;
                     cd22152"
                     /db_xref="CDD:438923"
     Site            order(49,53,56..57,60..61,64,66..67,72..74,76)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438923"
     Region          99..350
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          136..181
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          185..230
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          233..277
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..382
                     /gene="LOC107922241"
                     /coded_by="XM_016852161.2:805..1953"
                     /db_xref="GeneID:107922241"
ORIGIN      
        1 mpgfvrekkr itepnmclss plmqdhskgn hrspsqatde ieslllpglp ddvakyclal
       61 vprssfpsmg gvckrwrsfi qskeflmerk iagmleewly vltmdsegke shwevldclg
      121 qkhrllppmp gpekvgfgtt vlngkllvla gysvingtas asadvyqyds clncwsklan
      181 lnvarydfac aevngvvyvv ggygvegesl staevydpdt dkwtlieslr rprwgcfacg
      241 lngklyvlgg rssftignsr fvdvynpekq twcemkngcv mvtahavlek klfcmewknq
      301 rklaifnpdd nswkmvsvpl tgstsigfrf gildgklllf svegdpgyht llydpnaapg
      361 sewrtseikp sglclysvti ka
//
LOCUS       XP_016707830             851 aa            linear   PLN 06-AUG-2024
DEFINITION  mannosyl-oligosaccharide glucosidase GCS1 [Gossypium hirsutum].
ACCESSION   XP_016707830
VERSION     XP_016707830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..851
                     /product="mannosyl-oligosaccharide glucosidase GCS1"
                     /calculated_mol_wt=97665
     Region          109..>263
                     /region_name="Glyco_hydro_63N"
                     /note="Glycosyl hydrolase family 63 N-terminal domain;
                     pfam16923"
                     /db_xref="CDD:465316"
     Region          348..846
                     /region_name="Glyco_hydro_63"
                     /note="Glycosyl hydrolase family 63 C-terminal domain;
                     pfam03200"
                     /db_xref="CDD:397353"
     CDS             1..851
                     /gene="LOC107922345"
                     /coded_by="XM_016852341.2:192..2747"
                     /db_xref="GeneID:107922345"
ORIGIN      
        1 mtgdgrrsar srtkpssdvn edddafnkak pisklrrvkt kdhgtalril nadlkiilgf
       61 givaaliiff lvnhlisiae earrprvvtp fpaprimdlp qfqgehkesl ywgtyrphvy
      121 fgirartpls lvaglmwlgv kdrryfirhi cqdsddlsty gwtshngrdf ghqvlvdqdm
      181 tlatsflkyk eddsgyggdw avrinvqnqg wneemqknvh lffylaeedg nalslggdil
      241 dihensllas gsrtdigewq lhvkskadle vhysglrtph ihnlsdlvqe nlasqlirfn
      301 rlqlpdiyqs ssnilvfqis gripletdiv fvsgagensr veerisnlag vsltnqlnkk
      361 qrefdvkfes cfqladklds nsihvgkaai gnmlggigyf ygqskisipk nsnvkshddf
      421 llywpaelyt avpsrpffpr gflwdegfhq lliwrwdlhi sldivghwld linidgwipr
      481 eqilgaeals kvpaefvlqh ssngnpptlf lvlrdlvngi kknkftases seiisflqqa
      541 fvrleawfqw fnttqlgkdv gsyywhgrdn ltirelnpkt lssglddypr ashptederh
      601 ldlrcwmlla adcmnsvael iwkenkpgkd yastsnllsd fdtlnqmhfd hasgayfdfg
      661 nhtekvrlsw kenmignnyv nrelvrevle rpelklvphv gyvslfpfmt riipseswil
      721 ekqldlisnr silwtnyglr slaktssmym krntehdapy wrgpiwmnmn ymilsslrhy
      781 slengpyrdk araiyeelrd nlirnvvqny hqtgflweqy dqkqgkgkga rvftgwtslv
      841 llimaeayne m
//
LOCUS       XP_016707829             851 aa            linear   PLN 06-AUG-2024
DEFINITION  mannosyl-oligosaccharide glucosidase GCS1 [Gossypium hirsutum].
ACCESSION   XP_016707829
VERSION     XP_016707829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..851
                     /product="mannosyl-oligosaccharide glucosidase GCS1"
                     /calculated_mol_wt=97665
     Region          109..>263
                     /region_name="Glyco_hydro_63N"
                     /note="Glycosyl hydrolase family 63 N-terminal domain;
                     pfam16923"
                     /db_xref="CDD:465316"
     Region          348..846
                     /region_name="Glyco_hydro_63"
                     /note="Glycosyl hydrolase family 63 C-terminal domain;
                     pfam03200"
                     /db_xref="CDD:397353"
     CDS             1..851
                     /gene="LOC107922345"
                     /coded_by="XM_016852340.2:192..2747"
                     /db_xref="GeneID:107922345"
ORIGIN      
        1 mtgdgrrsar srtkpssdvn edddafnkak pisklrrvkt kdhgtalril nadlkiilgf
       61 givaaliiff lvnhlisiae earrprvvtp fpaprimdlp qfqgehkesl ywgtyrphvy
      121 fgirartpls lvaglmwlgv kdrryfirhi cqdsddlsty gwtshngrdf ghqvlvdqdm
      181 tlatsflkyk eddsgyggdw avrinvqnqg wneemqknvh lffylaeedg nalslggdil
      241 dihensllas gsrtdigewq lhvkskadle vhysglrtph ihnlsdlvqe nlasqlirfn
      301 rlqlpdiyqs ssnilvfqis gripletdiv fvsgagensr veerisnlag vsltnqlnkk
      361 qrefdvkfes cfqladklds nsihvgkaai gnmlggigyf ygqskisipk nsnvkshddf
      421 llywpaelyt avpsrpffpr gflwdegfhq lliwrwdlhi sldivghwld linidgwipr
      481 eqilgaeals kvpaefvlqh ssngnpptlf lvlrdlvngi kknkftases seiisflqqa
      541 fvrleawfqw fnttqlgkdv gsyywhgrdn ltirelnpkt lssglddypr ashptederh
      601 ldlrcwmlla adcmnsvael iwkenkpgkd yastsnllsd fdtlnqmhfd hasgayfdfg
      661 nhtekvrlsw kenmignnyv nrelvrevle rpelklvphv gyvslfpfmt riipseswil
      721 ekqldlisnr silwtnyglr slaktssmym krntehdapy wrgpiwmnmn ymilsslrhy
      781 slengpyrdk araiyeelrd nlirnvvqny hqtgflweqy dqkqgkgkga rvftgwtslv
      841 llimaeayne m
//
LOCUS       XP_040943356             851 aa            linear   PLN 06-AUG-2024
DEFINITION  mannosyl-oligosaccharide glucosidase GCS1 [Gossypium hirsutum].
ACCESSION   XP_040943356
VERSION     XP_040943356.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087422.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..851
                     /product="mannosyl-oligosaccharide glucosidase GCS1"
                     /calculated_mol_wt=97665
     Region          109..>263
                     /region_name="Glyco_hydro_63N"
                     /note="Glycosyl hydrolase family 63 N-terminal domain;
                     pfam16923"
                     /db_xref="CDD:465316"
     Region          348..846
                     /region_name="Glyco_hydro_63"
                     /note="Glycosyl hydrolase family 63 C-terminal domain;
                     pfam03200"
                     /db_xref="CDD:397353"
     CDS             1..851
                     /gene="LOC107922345"
                     /coded_by="XM_041087422.1:192..2747"
                     /db_xref="GeneID:107922345"
ORIGIN      
        1 mtgdgrrsar srtkpssdvn edddafnkak pisklrrvkt kdhgtalril nadlkiilgf
       61 givaaliiff lvnhlisiae earrprvvtp fpaprimdlp qfqgehkesl ywgtyrphvy
      121 fgirartpls lvaglmwlgv kdrryfirhi cqdsddlsty gwtshngrdf ghqvlvdqdm
      181 tlatsflkyk eddsgyggdw avrinvqnqg wneemqknvh lffylaeedg nalslggdil
      241 dihensllas gsrtdigewq lhvkskadle vhysglrtph ihnlsdlvqe nlasqlirfn
      301 rlqlpdiyqs ssnilvfqis gripletdiv fvsgagensr veerisnlag vsltnqlnkk
      361 qrefdvkfes cfqladklds nsihvgkaai gnmlggigyf ygqskisipk nsnvkshddf
      421 llywpaelyt avpsrpffpr gflwdegfhq lliwrwdlhi sldivghwld linidgwipr
      481 eqilgaeals kvpaefvlqh ssngnpptlf lvlrdlvngi kknkftases seiisflqqa
      541 fvrleawfqw fnttqlgkdv gsyywhgrdn ltirelnpkt lssglddypr ashptederh
      601 ldlrcwmlla adcmnsvael iwkenkpgkd yastsnllsd fdtlnqmhfd hasgayfdfg
      661 nhtekvrlsw kenmignnyv nrelvrevle rpelklvphv gyvslfpfmt riipseswil
      721 ekqldlisnr silwtnyglr slaktssmym krntehdapy wrgpiwmnmn ymilsslrhy
      781 slengpyrdk araiyeelrd nlirnvvqny hqtgflweqy dqkqgkgkga rvftgwtslv
      841 llimaeayne m
//
LOCUS       XP_016706447             222 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At3g27210 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706447
VERSION     XP_016706447.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850958.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706447.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="uncharacterized protein At3g27210 isoform X1"
                     /calculated_mol_wt=24217
     CDS             1..222
                     /gene="LOC107921091"
                     /coded_by="XM_016850958.2:150..818"
                     /db_xref="GeneID:107921091"
ORIGIN      
        1 mgncvtvykn kdpadmdlsa riqspikenn vrrepsivgy dsrlqpssme qetnlqemgf
       61 kmvwifcain alckigscla cvikcaynfs pgkteesffd sqpslesdfe dffsangdsa
      121 sssgnspnhq ksnhsmegav dahgesptdt kkqlielfre sldndddgns aagsskatpy
      181 rghlprkdvk aaesaqcclp slvrnlsfge rkkrlpspaa qy
//
LOCUS       XP_016706448             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At3g27210 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706448
VERSION     XP_016706448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850959.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..189
                     /product="uncharacterized protein At3g27210 isoform X2"
                     /calculated_mol_wt=20620
     CDS             1..189
                     /gene="LOC107921091"
                     /coded_by="XM_016850959.2:687..1256"
                     /db_xref="GeneID:107921091"
ORIGIN      
        1 mgncvtvykn kdpadmdlsa riqspikenn vrrepsivgy dsrlqpssme qetnlqemgk
       61 teesffdsqp slesdfedff sangdsasss gnspnhqksn hsmegavdah gesptdtkkq
      121 lielfresld ndddgnsaag sskatpyrgh lprkdvkaae saqcclpslv rnlsfgerkk
      181 rlpspaaqy
//
LOCUS       XP_040943357             115 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943357
VERSION     XP_040943357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087423.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12101
     CDS             1..115
                     /gene="LOC107921122"
                     /coded_by="XM_041087423.1:312..659"
                     /db_xref="GeneID:107921122"
ORIGIN      
        1 msrfasslaa slsvsrscts inlgfggldi garekqgnpk vddgfkvake kitciaasvd
       61 vdegfessgv eetrspvtng srshtnrryh dktasvttns ghssktalir kqira
//
LOCUS       XP_040943358              91 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943358
VERSION     XP_040943358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087424.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..91
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=9688
     CDS             1..91
                     /gene="LOC107921122"
                     /coded_by="XM_041087424.1:238..513"
                     /db_xref="GeneID:107921122"
ORIGIN      
        1 msgldigare kqgnpkvddg fkvakekitc iaasvdvdeg fessgveetr spvtngsrsh
       61 tnrryhdkta svttnsghss ktalirkqir a
//
LOCUS       XP_040943359              90 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943359
VERSION     XP_040943359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087425.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..90
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9631
     CDS             1..90
                     /gene="LOC107921122"
                     /coded_by="XM_041087425.1:312..584"
                     /db_xref="GeneID:107921122"
ORIGIN      
        1 msldigarek qgnpkvddgf kvakekitci aasvdvdegf essgveetrs pvtngsrsht
       61 nrryhdktas vttnsghssk talirkqira
//
LOCUS       XP_016707971             272 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit beta type-5 [Gossypium hirsutum].
ACCESSION   XP_016707971
VERSION     XP_016707971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="proteasome subunit beta type-5"
                     /calculated_mol_wt=29130
     Region          56..243
                     /region_name="proteasome_beta_type_5"
                     /note="proteasome beta type-5 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03761"
                     /db_xref="CDD:239730"
     Site            order(56,72,74,88,185,222,225..226)
                     /site_type="active"
                     /db_xref="CDD:239730"
     Site            order(74,77,79..84,104,106,121,133,136..137,139..140,143,
                     146,170,172,174..177,180,188..189,191..192,195..197,213,
                     220..223,226..227)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239730"
     CDS             1..272
                     /gene="LOC107922441"
                     /coded_by="XM_016852482.2:267..1085"
                     /db_xref="GeneID:107922441"
ORIGIN      
        1 mkldtsgles aapvwgapse lvdgfsaaps fdlpnttdfd gfqkeaiqmv kpakgtttla
       61 fifkegvmva adsrasmggy issqsvkkii einpymlgtm aggaadcqfw hrnlgikcrl
      121 helankrris vtgaskllan ilysyrgmgl svgtmiagwd etgpglyyvd seggrlkgmr
      181 fsvgsgspya ygvldngyry dmsveeaael arraiyhatf rdgasggvas vyyvgpngwk
      241 klsgddvgel hykyypvmps tveqemvevg ga
//
LOCUS       XP_016707972             272 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit beta type-5 [Gossypium hirsutum].
ACCESSION   XP_016707972
VERSION     XP_016707972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852483.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="proteasome subunit beta type-5"
                     /calculated_mol_wt=29130
     Region          56..243
                     /region_name="proteasome_beta_type_5"
                     /note="proteasome beta type-5 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03761"
                     /db_xref="CDD:239730"
     Site            order(56,72,74,88,185,222,225..226)
                     /site_type="active"
                     /db_xref="CDD:239730"
     Site            order(74,77,79..84,104,106,121,133,136..137,139..140,143,
                     146,170,172,174..177,180,188..189,191..192,195..197,213,
                     220..223,226..227)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239730"
     CDS             1..272
                     /gene="LOC107922441"
                     /coded_by="XM_016852483.2:291..1109"
                     /db_xref="GeneID:107922441"
ORIGIN      
        1 mkldtsgles aapvwgapse lvdgfsaaps fdlpnttdfd gfqkeaiqmv kpakgtttla
       61 fifkegvmva adsrasmggy issqsvkkii einpymlgtm aggaadcqfw hrnlgikcrl
      121 helankrris vtgaskllan ilysyrgmgl svgtmiagwd etgpglyyvd seggrlkgmr
      181 fsvgsgspya ygvldngyry dmsveeaael arraiyhatf rdgasggvas vyyvgpngwk
      241 klsgddvgel hykyypvmps tveqemvevg ga
//
LOCUS       XP_016707167             303 aa            linear   PLN 06-AUG-2024
DEFINITION  aquaporin AQPAn.G [Gossypium hirsutum].
ACCESSION   XP_016707167
VERSION     XP_016707167.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851678.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..303
                     /product="aquaporin AQPAn.G"
                     /calculated_mol_wt=32160
     Region          58..295
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(97,115..117,251..252,255,258)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(117..119,255..257)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..303
                     /gene="LOC107921840"
                     /coded_by="XM_016851678.1:70..981"
                     /db_xref="GeneID:107921840"
ORIGIN      
        1 marngivede ennfthnrvl pvastptpgq ikeesdakvf lstkvlglee llslevwras
       61 laellgtavl vfaldtivis tlqtetktpn lvmsiliafv vavlllatyp isgghinpiv
      121 tfaalltgli siskaaiyil aqcvggilgs lalkavvnsa iertyslagc tvtivvpgtd
      181 gptvigmgns qalwleiics fvflfasvwm afdrrqakav grviiciilg vvlgllvfis
      241 ttvtatkgyg gaglnparcf gpavvrgghl wnghwifwig ptigcvafal yvkmiprehi
      301 hsy
//
LOCUS       XP_040943360             272 aa            linear   PLN 06-AUG-2024
DEFINITION  ER lumen protein-retaining receptor erd-2.2 [Gossypium hirsutum].
ACCESSION   XP_040943360
VERSION     XP_040943360.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087426.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="ER lumen protein-retaining receptor erd-2.2"
                     /calculated_mol_wt=30608
     Region          72..215
                     /region_name="ER_lumen_recept"
                     /note="ER lumen protein retaining receptor; pfam00810"
                     /db_xref="CDD:459945"
     CDS             1..272
                     /gene="LOC107922489"
                     /coded_by="XM_041087426.1:277..1095"
                     /db_xref="GeneID:107922489"
ORIGIN      
        1 mrtqkrpiha vsmwvrrqpp kvkaflavvs gmaalvllrv ivndhdnlfv aaeavhsigi
       61 svliykltke ktcaglslks qeltaiflav rlycsfvmey dihtlldlat lattlwviym
      121 irfklkssym edkdnfviyy vvvpcavlal cihpttshnl lnriswafcv yleavsvlpq
      181 lrvmqntkiv epftahyvfa lgvarflsca hwvlqvldsr grllvalgyg lwpsmvlise
      241 ivqtfiladf cyyyiksvfg gqlvlrlpsg vv
//
LOCUS       XP_016707646            2042 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707646
VERSION     XP_016707646.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852157.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707646.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2042
                     /product="uncharacterized protein"
                     /calculated_mol_wt=229561
     Region          1804..2041
                     /region_name="Urb2"
                     /note="Urb2/Npa2 family; pfam10441"
                     /db_xref="CDD:431289"
     CDS             1..2042
                     /gene="LOC107922238"
                     /coded_by="XM_016852157.2:110..6238"
                     /db_xref="GeneID:107922238"
ORIGIN      
        1 mvdksvkltk knkrkfnssq eksslrkrrr ndllikeake gessartepe lnpseerpwr
       61 nlqlilslqn kqtdlqkkve lafdfvdsee kevrndvagd detvnisrmi vflsdwiqsl
      121 lvspqktdkv dgvvdacldf kcwrifefcl keslklhvsl nfsrnllrai gyiarnvlsf
      181 vsdpsvssne svfagegfel ygvvldcvsl lfsfqhglsn gnlelwisni dvvlqlvhki
      241 halnlgggni gafamqfscv vlepfakflr ihptrkngfr dfvdkllepl lllldvlygc
      301 vnennsfltr nllmlveevl shglfhpvhi dgflglrsve kyalkidakd snvviksyhr
      361 hlfdklesmv kknivlsgig rlfhlfvari kkqkgasaag tagkvggtrc medelsghls
      421 tdpspssrvi pdnnyrssty saearkslfd ffvqllepll lemdgymqsn laarvslvdv
      481 hctlksinsl vasfvhekvy vrtedisega clnflkkvyn tvisfaaklf glsemdidgk
      541 trkemfplla kelflavghf ldieydvigs dlislwlmil syltslsyld lpdqsllisp
      601 ildlgcqlvn lysalrqvnn siftlckavr llithhqese tsctrvfays aslsneataa
      661 svaillgsqe fklavhhaik sipegqasel iqqltadvse smewlkigcs vtdgkeierl
      721 hvrdhgmlsi hkqlellgrv lseiymvlld slsvtagnci llgpsikelv stiypftcsl
      781 gekcldgvnv flfsvmgtts enmvaeneke khgisiqwif vflfrlymsc rslyrqvisl
      841 tppstsrkls lamgdaftay tgrdwmeksd wtddgyfswi inpslslldl ihhitdtyik
      901 dniedccpli yvlhimalqr lvdlsrhrcs leylleqnek lmqvqkfdda dlsyyskkdr
      961 klkrrilvle qeavqladfv lgylslvann hssilssddt scekkahesd kwdfgicsvn
     1021 nkslpiaiww iicqnidilc iyadakklkk kfktfltlli qtslpclskt fqqvekhkie
     1081 kdgqpkkisl yqisqgllkd stlydhkfvr rnlsssfcha lenlalllfg dssvsdrnfn
     1141 sfpvwsevls tldnspavvs grryvkhdsp trsisnscne qssmnptalp fktvkdcksl
     1201 lnllcwmpkg flssksfskl atcvvhldql vvaellhcqg tlssygcelf qlfvtcrrtl
     1261 kniimalcee nieaslssll svaegsyfit wlfksvsavt elldtmsedc iseykikkfs
     1321 lmdhtsyvff aiskyqfsqa vdfignseqp ckhfsgfvsd qnilnepllr fnnlkdseal
     1381 kslsiiaesl keqaesllss lkealgiaqv giekeaenin kmsflvscfg gflwglasal
     1441 nqlgekcgel ktklsrwkse plskikictn vfvdlisdvl hmflengqqr rsdsdsqssd
     1501 kfdyrrdslv fndlvvlpcl nkhlllgllk gdhpdravll rqllitysai lrlnlrvggp
     1561 llssgmapli idmskfllle lansvqsppp ftfvwldgav kyleevgshf tftdsalnen
     1621 vygklielhl rgigkcislq gkratleshe ressskilrd dtglsesfls hgshfldefk
     1681 arlrrsfsvf vknpselqlm stieaiekal vgvqgahari yeitagsang gmvsstvagg
     1741 idcldllleh gsgrkclsvi krhirgfvaa lfniilhlqs plifyrksvs negdrnldpg
     1801 svvlmcievl trvsgkhalf qldlchigqs lripgalfqd fhqlrisegp vssntfldeq
     1861 nhnstvsiey hvldqqfsin lfaaccrlly tilkhhksec erciavlees vslllhclet
     1921 vgadllvrkg yfsweiqegv kcagflrriy eeirqqkdvf aghcykflst yiwvfsgygp
     1981 hktgirreid ealkpgvyal idacsandlq ylhtvfgegp crntlaslqr dyklnfqyeg
     2041 kv
//
LOCUS       XP_016707648            2042 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707648
VERSION     XP_016707648.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852159.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707648.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2042
                     /product="uncharacterized protein"
                     /calculated_mol_wt=229561
     Region          1804..2041
                     /region_name="Urb2"
                     /note="Urb2/Npa2 family; pfam10441"
                     /db_xref="CDD:431289"
     CDS             1..2042
                     /gene="LOC107922238"
                     /coded_by="XM_016852159.2:110..6238"
                     /db_xref="GeneID:107922238"
ORIGIN      
        1 mvdksvkltk knkrkfnssq eksslrkrrr ndllikeake gessartepe lnpseerpwr
       61 nlqlilslqn kqtdlqkkve lafdfvdsee kevrndvagd detvnisrmi vflsdwiqsl
      121 lvspqktdkv dgvvdacldf kcwrifefcl keslklhvsl nfsrnllrai gyiarnvlsf
      181 vsdpsvssne svfagegfel ygvvldcvsl lfsfqhglsn gnlelwisni dvvlqlvhki
      241 halnlgggni gafamqfscv vlepfakflr ihptrkngfr dfvdkllepl lllldvlygc
      301 vnennsfltr nllmlveevl shglfhpvhi dgflglrsve kyalkidakd snvviksyhr
      361 hlfdklesmv kknivlsgig rlfhlfvari kkqkgasaag tagkvggtrc medelsghls
      421 tdpspssrvi pdnnyrssty saearkslfd ffvqllepll lemdgymqsn laarvslvdv
      481 hctlksinsl vasfvhekvy vrtedisega clnflkkvyn tvisfaaklf glsemdidgk
      541 trkemfplla kelflavghf ldieydvigs dlislwlmil syltslsyld lpdqsllisp
      601 ildlgcqlvn lysalrqvnn siftlckavr llithhqese tsctrvfays aslsneataa
      661 svaillgsqe fklavhhaik sipegqasel iqqltadvse smewlkigcs vtdgkeierl
      721 hvrdhgmlsi hkqlellgrv lseiymvlld slsvtagnci llgpsikelv stiypftcsl
      781 gekcldgvnv flfsvmgtts enmvaeneke khgisiqwif vflfrlymsc rslyrqvisl
      841 tppstsrkls lamgdaftay tgrdwmeksd wtddgyfswi inpslslldl ihhitdtyik
      901 dniedccpli yvlhimalqr lvdlsrhrcs leylleqnek lmqvqkfdda dlsyyskkdr
      961 klkrrilvle qeavqladfv lgylslvann hssilssddt scekkahesd kwdfgicsvn
     1021 nkslpiaiww iicqnidilc iyadakklkk kfktfltlli qtslpclskt fqqvekhkie
     1081 kdgqpkkisl yqisqgllkd stlydhkfvr rnlsssfcha lenlalllfg dssvsdrnfn
     1141 sfpvwsevls tldnspavvs grryvkhdsp trsisnscne qssmnptalp fktvkdcksl
     1201 lnllcwmpkg flssksfskl atcvvhldql vvaellhcqg tlssygcelf qlfvtcrrtl
     1261 kniimalcee nieaslssll svaegsyfit wlfksvsavt elldtmsedc iseykikkfs
     1321 lmdhtsyvff aiskyqfsqa vdfignseqp ckhfsgfvsd qnilnepllr fnnlkdseal
     1381 kslsiiaesl keqaesllss lkealgiaqv giekeaenin kmsflvscfg gflwglasal
     1441 nqlgekcgel ktklsrwkse plskikictn vfvdlisdvl hmflengqqr rsdsdsqssd
     1501 kfdyrrdslv fndlvvlpcl nkhlllgllk gdhpdravll rqllitysai lrlnlrvggp
     1561 llssgmapli idmskfllle lansvqsppp ftfvwldgav kyleevgshf tftdsalnen
     1621 vygklielhl rgigkcislq gkratleshe ressskilrd dtglsesfls hgshfldefk
     1681 arlrrsfsvf vknpselqlm stieaiekal vgvqgahari yeitagsang gmvsstvagg
     1741 idcldllleh gsgrkclsvi krhirgfvaa lfniilhlqs plifyrksvs negdrnldpg
     1801 svvlmcievl trvsgkhalf qldlchigqs lripgalfqd fhqlrisegp vssntfldeq
     1861 nhnstvsiey hvldqqfsin lfaaccrlly tilkhhksec erciavlees vslllhclet
     1921 vgadllvrkg yfsweiqegv kcagflrriy eeirqqkdvf aghcykflst yiwvfsgygp
     1981 hktgirreid ealkpgvyal idacsandlq ylhtvfgegp crntlaslqr dyklnfqyeg
     2041 kv
//
LOCUS       XP_016707649             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707649
VERSION     XP_016707649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..130
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14583
     CDS             1..130
                     /gene="LOC107922239"
                     /coded_by="XM_016852160.2:170..562"
                     /db_xref="GeneID:107922239"
ORIGIN      
        1 mahhirsrgd sildsfsltp lpypvllils ltsvflgiss ylnyesaves adqqmswvlf
       61 atpvvlilla rwlssmevsg mlfglspwer irrthhhpse gtspwavaaf ivlllvllqy
      121 qsifreswlv
//
LOCUS       XP_016708147             307 aa            linear   PLN 06-AUG-2024
DEFINITION  triosephosphate isomerase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016708147
VERSION     XP_016708147.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852658.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708147.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..307
                     /product="triosephosphate isomerase, chloroplastic"
                     /calculated_mol_wt=32949
     Region          9..307
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(63,65,147,217,223,263,282,284..285)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238190"
     Site            order(63,66,97..99,101,104,116,134,137..138,149..150)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238190"
     Site            order(65,147,217)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238190"
     CDS             1..307
                     /gene="LOC107922568"
                     /coded_by="XM_016852658.2:196..1119"
                     /db_xref="GeneID:107922568"
ORIGIN      
        1 msmvstycph fsglrrsspn lhnapsqsfl qhfssqlrlp sspkpcravi amsgsgkffv
       61 ggnwkcngtk dsitklvsdl nsaklesdvd vvvappfvyl dqvtssltdr ievsaqnswi
      121 gkggaftgei sveqlkdigc kwvilghser rhvigeddqf igkkaafaln eglgviacig
      181 elleereagk tfdvcfqqlk afadvvpswd niviayepvw aigtgkvatp qqaqevhvav
      241 rdwlkknvse evasktriiy ggsvngsncg elakeedidg flvggaslkg pefativnsv
      301 ttkkvaa
//
LOCUS       XP_016706550             163 aa            linear   PLN 06-AUG-2024
DEFINITION  translocon-associated protein subunit alpha isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706550
VERSION     XP_016706550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="translocon-associated protein subunit alpha
                     isoform X1"
                     /calculated_mol_wt=17757
     Region          <10..>100
                     /region_name="TRAP_alpha"
                     /note="Translocon-associated protein (TRAP), alpha
                     subunit; pfam03896"
                     /db_xref="CDD:461085"
     CDS             1..163
                     /gene="LOC107921184"
                     /coded_by="XM_016851061.2:1027..1518"
                     /db_xref="GeneID:107921184"
ORIGIN      
        1 mgsplniiai qasvhlpfdh rmlvqnltaq tfnkasvsps vqatfpymfa vsrylqpgtf
       61 dlvgtivyei dqkpyqntfy ngtvevveag gflsvesvfl vtlgiallvl lalwlhgqfq
      121 lttkktkkap kvevgigttd asldewlqgt aytqsasksk kkk
//
LOCUS       XP_040943361             163 aa            linear   PLN 06-AUG-2024
DEFINITION  translocon-associated protein subunit alpha isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943361
VERSION     XP_040943361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087427.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="translocon-associated protein subunit alpha
                     isoform X1"
                     /calculated_mol_wt=17757
     Region          <10..>100
                     /region_name="TRAP_alpha"
                     /note="Translocon-associated protein (TRAP), alpha
                     subunit; pfam03896"
                     /db_xref="CDD:461085"
     CDS             1..163
                     /gene="LOC107921184"
                     /coded_by="XM_041087427.1:996..1487"
                     /db_xref="GeneID:107921184"
ORIGIN      
        1 mgsplniiai qasvhlpfdh rmlvqnltaq tfnkasvsps vqatfpymfa vsrylqpgtf
       61 dlvgtivyei dqkpyqntfy ngtvevveag gflsvesvfl vtlgiallvl lalwlhgqfq
      121 lttkktkkap kvevgigttd asldewlqgt aytqsasksk kkk
//
LOCUS       XP_016706551             155 aa            linear   PLN 06-AUG-2024
DEFINITION  translocon-associated protein subunit alpha isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706551
VERSION     XP_016706551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851062.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..155
                     /product="translocon-associated protein subunit alpha
                     isoform X2"
                     /calculated_mol_wt=17100
     Region          <10..>100
                     /region_name="TRAP_alpha"
                     /note="Translocon-associated protein (TRAP), alpha
                     subunit; pfam03896"
                     /db_xref="CDD:461085"
     CDS             1..155
                     /gene="LOC107921184"
                     /coded_by="XM_016851062.2:673..1140"
                     /db_xref="GeneID:107921184"
ORIGIN      
        1 mgsplniiai qasvhlpfdh rmlvqnltaq tfnkasvsps vqatfpymfa vsrylqpgtf
       61 dlvgtivyei dqkpyqntfy ngtvevveag gflsvesvfl vtlgiallvl lalwlhgqfq
      121 lttkglllne sidgylveks tptmytwski yfvla
//
LOCUS       XP_016706552             142 aa            linear   PLN 06-AUG-2024
DEFINITION  translocon-associated protein subunit alpha isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016706552
VERSION     XP_016706552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="translocon-associated protein subunit alpha
                     isoform X3"
                     /calculated_mol_wt=15458
     Region          <3..>79
                     /region_name="TRAP_alpha"
                     /note="Translocon-associated protein (TRAP), alpha
                     subunit; pfam03896"
                     /db_xref="CDD:461085"
     CDS             1..142
                     /gene="LOC107921184"
                     /coded_by="XM_016851063.2:917..1345"
                     /db_xref="GeneID:107921184"
ORIGIN      
        1 mlvqnltaqt fnkasvspsv qatfpymfav srylqpgtfd lvgtivyeid qkpyqntfyn
       61 gtvevveagg flsvesvflv tlgiallvll alwlhgqfql ttkktkkapk vevgigttda
      121 sldewlqgta ytqsaskskk kk
//
LOCUS       XP_040943362             142 aa            linear   PLN 06-AUG-2024
DEFINITION  translocon-associated protein subunit alpha isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943362
VERSION     XP_040943362.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087428.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="translocon-associated protein subunit alpha
                     isoform X3"
                     /calculated_mol_wt=15458
     Region          <3..>79
                     /region_name="TRAP_alpha"
                     /note="Translocon-associated protein (TRAP), alpha
                     subunit; pfam03896"
                     /db_xref="CDD:461085"
     CDS             1..142
                     /gene="LOC107921184"
                     /coded_by="XM_041087428.1:889..1317"
                     /db_xref="GeneID:107921184"
ORIGIN      
        1 mlvqnltaqt fnkasvspsv qatfpymfav srylqpgtfd lvgtivyeid qkpyqntfyn
       61 gtvevveagg flsvesvflv tlgiallvll alwlhgqfql ttkktkkapk vevgigttda
      121 sldewlqgta ytqsaskskk kk
//
LOCUS       XP_016707451             508 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707451
VERSION     XP_016707451.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851962.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707451.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="extensin-1 isoform X1"
                     /calculated_mol_wt=55965
     Region          34..116
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..508
                     /gene="LOC107922117"
                     /coded_by="XM_016851962.2:223..1749"
                     /db_xref="GeneID:107922117"
ORIGIN      
        1 mqilpfrgga lvcfiasllf vasfcnadak tvevvgagec adcaennlei sqafsglrvs
       61 idckpengkn fktrgsgeld kqgnfkvfvp edlvengelk eecyaqlhsv saapcpahdg
      121 lesaklvlks rsdgkhgfgl kgklrfsplt casaffwphf kfpplpkwnh pplpkfplpp
      181 fkgfhhhypi ippiykkplp ppspvykppp vpvnppvpiy kpppvpvykp ppvpvkplpp
      241 pvpiykpppv ekphpppvpv ykpppvpvyk kpcpppvpvy ksppvpvykk phpppvpvyk
      301 kphpppvpvy kkpcpppvpv yksppvpeph pppvpvykkp hpppvpvykk pcpppvpvyk
      361 sppvpephpp pvpvhkpppv pvykkrvppp vpiykpppvp vynkplpppv pvytkplppp
      421 vptykpkplp pipykplppl pkippfpkkp cpplpklppl pkippkyfhh hpplpklppl
      481 pkippkyfhh hpkfgkwpsl ppfaphhp
//
LOCUS       XP_016707452             470 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich protein 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707452
VERSION     XP_016707452.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851963.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707452.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="proline-rich protein 4 isoform X2"
                     /calculated_mol_wt=51799
     Region          34..116
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..470
                     /gene="LOC107922117"
                     /coded_by="XM_016851963.2:165..1577"
                     /db_xref="GeneID:107922117"
ORIGIN      
        1 mqilpfrgga lvcfiasllf vasfcnadak tvevvgagec adcaennlei sqafsglrvs
       61 idckpengkn fktrgsgeld kqgnfkvfvp edlvengelk eecyaqlhsv saapcpahdg
      121 lesaklvlks rsdgkhgfgl kgklrfsplt casaffwphf kfpplpkwnh pplpkfplpp
      181 fkgfhhhypi ippiykkplp ppspvykppp vpvnppvpiy kpppvpvykp ppvpvkplpp
      241 pvpiykpppv ekphpppvpv ykpppvpvyk kpcpppvpvy ksppvpvykk phpppvpvyk
      301 kphpppvpvy kkpcpppvpv yksppvpeph pppvpvhkpp pvpvykkrvp ppvpiykppp
      361 vpvynkplpp pvpvytkplp ppvptykpkp lppipykplp plpkippfpk kpcpplpklp
      421 plpkippkyf hhhpplpklp plpkippkyf hhhpkfgkwp slppfaphhp
//
LOCUS       XP_040943363             470 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich protein 4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943363
VERSION     XP_040943363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087429.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="proline-rich protein 4 isoform X3"
                     /calculated_mol_wt=51799
     Region          34..116
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..470
                     /gene="LOC107922117"
                     /coded_by="XM_041087429.1:165..1577"
                     /db_xref="GeneID:107922117"
ORIGIN      
        1 mqilpfrgga lvcfiasllf vasfcnadak tvevvgagec adcaennlei sqafsglrvs
       61 idckpengkn fktrgsgeld kqgnfkvfvp edlvengelk eecyaqlhsv saapcpahdg
      121 lesaklvlks rsdgkhgfgl kgklrfsplt casaffwphf kfpplpkwnh pplpkfplpp
      181 fkgfhhhypi ippiykkplp ppspvykppp vpvnppvpiy kpppvpvykp ppvpvkplpp
      241 pvpiykpppv ekphpppvpv ykpppvpvyk kpcpppvpvy ksppvpvykk phpppvpvyk
      301 kphpppvpvy kkpcpppvpv yksppvpeph pppvpvhkpp pvpvykkrvp ppvpiykppp
      361 vpvynkplpp pvpvytkplp ppvptykpkp lppipykplp plpkippfpk kpcpplpklp
      421 plpkippkyf hhhpplpklp plpkippkyf hhhpkfgkwp slppfaphhp
//
LOCUS       XP_040943364             470 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich protein 4 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943364
VERSION     XP_040943364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087430.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="proline-rich protein 4 isoform X4"
                     /calculated_mol_wt=51799
     Region          34..116
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..470
                     /gene="LOC107922117"
                     /coded_by="XM_041087430.1:165..1577"
                     /db_xref="GeneID:107922117"
ORIGIN      
        1 mqilpfrgga lvcfiasllf vasfcnadak tvevvgagec adcaennlei sqafsglrvs
       61 idckpengkn fktrgsgeld kqgnfkvfvp edlvengelk eecyaqlhsv saapcpahdg
      121 lesaklvlks rsdgkhgfgl kgklrfsplt casaffwphf kfpplpkwnh pplpkfplpp
      181 fkgfhhhypi ippiykkplp ppspvykppp vpvnppvpiy kpppvpvykp ppvpvkplpp
      241 pvpiykpppv ekphpppvpv ykpppvpvyk kpcpppvpvy ksppvpvykk phpppvpvyk
      301 kphpppvpvy kkpcpppvpv yksppvpeph pppvpvhkpp pvpvykkrvp ppvpiykppp
      361 vpvynkplpp pvpvytkplp ppvptykpkp lppipykplp plpkippfpk kpcpplpklp
      421 plpkippkyf hhhpplpklp plpkippkyf hhhpkfgkwp slppfaphhp
//
LOCUS       XP_016707806             173 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase [Gossypium hirsutum].
ACCESSION   XP_016707806
VERSION     XP_016707806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..173
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /calculated_mol_wt=18130
     Region          5..170
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(62..63,68,119,121,129)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..173
                     /gene="LOC107922329"
                     /coded_by="XM_016852317.2:357..878"
                     /db_xref="GeneID:107922329"
ORIGIN      
        1 masnpkvffd mtiggqpagr ivmelfadct prtaenfral ctgekgvgrs gkplhyksss
       61 fhrvipnfmc qggdftagng tggesiygsk fadenfikkh tgpgilsman agpgtngsqf
      121 fictaktewl dgkhvvfgqv vegmdvvkai ekvgsssgrt skpvvvadcg qls
//
LOCUS       XP_016706529             339 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706529
VERSION     XP_016706529.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851040.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37281
     Region          59..>116
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..339
                     /gene="LOC107921166"
                     /coded_by="XM_016851040.2:42..1061"
                     /db_xref="GeneID:107921166"
ORIGIN      
        1 myihwclmqv psffqfydlf afcfilysps fmdlahkllf aallifaati dgtqaaamvs
       61 gavfcdqckd gqrslfdypl sgmkvtvtca dgtgqvtmsr eettnvfgny vmrfdgtpdl
      121 sncnaqvsgs gegsndcgat agpaqklrlm frmfgmeiyg vdsllsepsq pmsfcprssn
      181 pvpapiitpt rpppptfrlp plpplppmpp lpfseasacs hqywtmpeyk cywrvlnpet
      241 kvslifgpla arrygsdmtl weslqgrgdp yktllreatt allnsyntlq fpynsigvvt
      301 rtnwalmgst rgvlitalrf iransgsgrv tckltpcks
//
LOCUS       XP_016707224             133 aa            linear   PLN 06-AUG-2024
DEFINITION  probable amidase At4g34880 [Gossypium hirsutum].
ACCESSION   XP_016707224
VERSION     XP_016707224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851735.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="probable amidase At4g34880"
                     /calculated_mol_wt=14748
     Region          <4..118
                     /region_name="Amidase"
                     /note="cl18951"
                     /db_xref="CDD:450241"
     CDS             1..133
                     /gene="LOC107921932"
                     /coded_by="XM_016851735.1:24..425"
                     /db_xref="GeneID:107921932"
ORIGIN      
        1 mmqekleeyg qqtliesekt ngigekerka aeyleklsrd gferkmkdyk ldalvtlgis
       61 lamtvlaigg ypgisvpagy qsvgmpfgiy fgglkgsepk liemayafeq atrlrkpppq
      121 ffqltnhflf gtv
//
LOCUS       XP_016706732             520 aa            linear   PLN 06-AUG-2024
DEFINITION  probable amidase At4g34880 [Gossypium hirsutum].
ACCESSION   XP_016706732
VERSION     XP_016706732.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706732.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="probable amidase At4g34880"
                     /calculated_mol_wt=55239
     Region          36..520
                     /region_name="Amidase"
                     /note="cl18951"
                     /db_xref="CDD:450241"
     CDS             1..520
                     /gene="LOC107921382"
                     /coded_by="XM_016851243.2:508..2070"
                     /db_xref="GeneID:107921382"
ORIGIN      
        1 masssslrss slflflilss ifslgfstrt itnytfsire atikdikrsf ernqltsrql
       61 vqyylreiar lnallkgiie vnpdallqad aadkerkckv ngslpnlhgi pillkdniat
      121 kdklnttags fallgsvvpr dagvveklrk agaiilgkas lsewanfrst tatsgfsprg
      181 gqgknpyvls atpcgsssgs aisvaanlvt vslgtetdgs ilcpssfnsv vglkptvglt
      241 sragvipvtp rqdtigpicr tvsdavyvld aivgfdsnde atrhasyyip pggykrflnp
      301 yglkgkrlgi vrnpffkiaq glglgqtfdn hlhtlrrqga ivvdnlqian idvilnvtas
      361 geavaivaef klslnaylke lvassvrsla diiafnlkfp dleltdkigq diflaaqatn
      421 gigaqekaal anlenlskng leklmrdskl davvtprada ssvyaiggfp aiivpagyds
      481 qgvpigisfg glkgsegkli eiayafeqat kirkppsfkp
//
LOCUS       XP_016706697             520 aa            linear   PLN 06-AUG-2024
DEFINITION  probable amidase At4g34880 [Gossypium hirsutum].
ACCESSION   XP_016706697
VERSION     XP_016706697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..520
                     /product="probable amidase At4g34880"
                     /calculated_mol_wt=56573
     Region          33..511
                     /region_name="Amidase"
                     /note="cl18951"
                     /db_xref="CDD:450241"
     CDS             1..520
                     /gene="LOC107921334"
                     /coded_by="XM_016851208.2:220..1782"
                     /db_xref="GeneID:107921334"
ORIGIN      
        1 mastkssplt iplfltwmil flqpmvssgn hafsikeatv qdlqlafekn qltsrqlvef
       61 ymgeihrlnv llravievnp dalyqadead rerkakapgs lsglhglpil lkdniatkdk
      121 mnttagslal lgsivprdad vvsklrkaga iilgkvslse wahfrdgsvp sgwcarsgqg
      181 knpyniskdp cgsssgsaia aaanlaavtl gtetegsilc psnnntivgi kptvgltsra
      241 gvvpitprqd tvgpmcrtva davyvldaia gldyndkati kaskyiprgg ykqflkidgl
      301 kgkrrglfrn effnvgegsv yakvferhfs tlrrrgavlv envnaskyle aystsidyet
      361 lamtaefkla insylkqlvv skvrslkdli afnnkfskle ktkeydqqff ldteatngig
      421 qkekeallnl akmsrdgfek lmeenkldal lspfsvassi lgrgqypgii vpagydregl
      481 pfglcfgglk gseptlieia yafeqatkir rhlhsstevi
//
LOCUS       XP_016706366             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706366
VERSION     XP_016706366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850877.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=22844
     CDS             1..197
                     /gene="LOC107921026"
                     /coded_by="XM_016850877.2:142..735"
                     /db_xref="GeneID:107921026"
ORIGIN      
        1 milavlfans kgnilverpd sldfftklps lfawsglftl ftwclemsas mllckyeyde
       61 lalaevifvi tsavkdvcgk lpterlflgk ygricltlde iiwkiffsse lelmelldgh
      121 cdilaliayq fedinvlycy fhdltnlrly itqiiwycvf pvthmyitcy vvstgiigim
      181 rplhlhellm klyqlrf
//
LOCUS       XP_016706367             129 aa            linear   PLN 06-AUG-2024
DEFINITION  TSET complex member tstD isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706367
VERSION     XP_016706367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850878.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..129
                     /product="TSET complex member tstD isoform X2"
                     /calculated_mol_wt=14803
     CDS             1..129
                     /gene="LOC107921026"
                     /coded_by="XM_016850878.2:143..532"
                     /db_xref="GeneID:107921026"
ORIGIN      
        1 milavlfans kgnilverpd sldfftklps lfawsglftl ftwclemsas mllckyeyde
       61 lalaevifvi tsavkdvcgk lpterlflgk ygricltlde iiwkvrsqry lentnkirrl
      121 vrlkpptef
//
LOCUS       XP_016706368             125 aa            linear   PLN 06-AUG-2024
DEFINITION  TSET complex member tstD isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016706368
VERSION     XP_016706368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850879.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..125
                     /product="TSET complex member tstD isoform X3"
                     /calculated_mol_wt=14332
     CDS             1..125
                     /gene="LOC107921026"
                     /coded_by="XM_016850879.2:133..510"
                     /db_xref="GeneID:107921026"
ORIGIN      
        1 milavlfans kgnilverpd sldfftklps lfawsglftl ftwclemsas mllckyeyde
       61 lalaevifvi tsavkdvcgk lpterlflgk ygricltlde iiwkrylent nkirrlvrlk
      121 pptef
//
LOCUS       XP_016707239             186 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 4 [Gossypium hirsutum].
ACCESSION   XP_016707239
VERSION     XP_016707239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851750.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..186
                     /product="dirigent protein 4"
                     /calculated_mol_wt=20159
     Region          39..184
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..186
                     /gene="LOC107921956"
                     /coded_by="XM_016851750.2:1..561"
                     /db_xref="GeneID:107921956"
ORIGIN      
        1 mkgssiiswi lvitsaispi ytqyysktvp fvsnaekvtn lhfffhdtls gknpsavlva
       61 hgnitgneks aapfssvyai ddpltegpep tsevignvqg lwvsssksmp tlmaffdfgf
      121 tkgefngssi svfsrnpise terelavvgg rgkfrmakgv aklktyflnv ttedaiveyn
      181 atviyy
//
LOCUS       XP_016707220             185 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 4 [Gossypium hirsutum].
ACCESSION   XP_016707220
VERSION     XP_016707220.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707220.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..185
                     /product="dirigent protein 4"
                     /calculated_mol_wt=20337
     Region          39..183
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..185
                     /gene="LOC107921926"
                     /coded_by="XM_016851731.2:28..585"
                     /db_xref="GeneID:107921926"
ORIGIN      
        1 mrgtltltwi lmvcisqvav qsqyyseslp ydprpvkvtn lhfflhetlr gknptvvmva
       61 qanntsndny ssvpfgtlya iddplkigpg dnsevignal glgilagkns ttvvmyldfg
      121 fttgkfkgss isifsrnpli eterelsvvg grgefrmaeg harlknyffd gttviieynv
      181 tiihy
//
LOCUS       XP_016707512             175 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707512
VERSION     XP_016707512.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852023.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707512.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..175
                     /product="glycine-rich protein 2"
                     /calculated_mol_wt=16747
     Region          6..71
                     /region_name="CSD"
                     /note="'Cold-shock' DNA-binding domain; pfam00313"
                     /db_xref="CDD:278729"
     Site            order(12,21,32,61)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:239905"
     Site            order(18..24,31..34)
                     /site_type="active"
                     /note="RNA-binding motif [active]"
                     /db_xref="CDD:239905"
     Region          <122..175
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..175
                     /gene="LOC107922149"
                     /coded_by="XM_016852023.2:249..776"
                     /db_xref="GeneID:107922149"
ORIGIN      
        1 mgenrmtgkv kwfddqkgyg fispddggdd lfvhqssirs egfrsladge eveyvvesse
       61 grpkavevtg pngnpvrgss rsgrgggggg gygggsggyg gggrrggygg ggggggggga
      121 gcykcgemgh lardcgqggg ggggrygggg gggggacync ggsghfarec pnsgr
//
LOCUS       XP_016707513             173 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich protein 2 [Gossypium hirsutum].
ACCESSION   XP_016707513
VERSION     XP_016707513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852024.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..173
                     /product="glycine-rich protein 2"
                     /calculated_mol_wt=16693
     Region          6..71
                     /region_name="CSD"
                     /note="'Cold-shock' DNA-binding domain; pfam00313"
                     /db_xref="CDD:278729"
     Site            order(12,21,32,61)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:239905"
     Site            order(18..24,31..34)
                     /site_type="active"
                     /note="RNA-binding motif [active]"
                     /db_xref="CDD:239905"
     Region          <122..173
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..173
                     /gene="LOC107922150"
                     /coded_by="XM_016852024.2:221..742"
                     /db_xref="GeneID:107922150"
ORIGIN      
        1 mgenrmtgkv kwfddqkgyg fispddggdd lfvhqssirs egfrsladge eveyvvesse
       61 grpkavevtg pngnpvrgss rsgrgggggs gygggsggyg gggrrsgygg ggggggggga
      121 gcykcgemgh larecgqggg ggggrygggg gggacyncgg sghfardcpn sgr
//
LOCUS       XP_016706193             493 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin transporter-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016706193
VERSION     XP_016706193.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850704.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706193.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="auxin transporter-like protein 2"
                     /calculated_mol_wt=55361
     Region          2..461
                     /region_name="PLN03074"
                     /note="auxin influx permease; Provisional"
                     /db_xref="CDD:215559"
     CDS             1..493
                     /gene="LOC107920883"
                     /coded_by="XM_016850704.2:262..1743"
                     /db_xref="GeneID:107920883"
ORIGIN      
        1 massdkvvet vivgnyveme tegkpkgmks kipnlfwhgg svydawfsca snqvaqvllt
       61 lpysfsqlgm lsgilfqlfy glmgswtayl isilyveyrt rkerekvdfr nhviqwfevl
      121 dgllgkhwrn vglafnctfl lfgsviqlia casniyyind nldkrtwtyi fgaccattvf
      181 ipsfhnyriw sflglimtty tawyltiasl lhgqvegvkh sgptklvlyf tgatnilytf
      241 gghavtveim hamwkpqkfk aiyliatlyv ltltlpvaaa vywafgdmll dhsnafsllp
      301 rtpfrdmavi lmlihqfitf gfactplyfv wekaigmhec kslckraaar lpvvvpiwfl
      361 aiifpffgpi nstvgsllvs ftvyvipala hiftfrsata renaveqpsk yfgrwvgtyt
      421 invfvvvwvl ivgfgfggwa smtnfihqid tfglftkcyq cpppasavsp plhglnatta
      481 aplhhpfnht hsa
//
LOCUS       XP_040943365             358 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1b isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943365
VERSION     XP_040943365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087431.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..358
                     /product="thaumatin-like protein 1b isoform X1"
                     /calculated_mol_wt=38799
     Region          31..247
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..358
                     /gene="LOC107921221"
                     /coded_by="XM_041087431.1:415..1491"
                     /db_xref="GeneID:107921221"
ORIGIN      
        1 mdrrhlsstf vlllfisffs evnpasfkiv nkcrhtiwpg flsgantahl tttgfvlkpg
       61 ksrtvtipks wsgrlwgrtl cgvdssrkfv cqsgdcgsgq iecsgngakp patlaeftln
      121 gaggldfydv slvdgynlpm livvkggkgg ncsatgclld lngacpselr varqnggggv
      181 gcrsaceafg dpeyccsgpf gtpnvcrpsr yslffkhacp raysyayddt tstytcagad
      241 yvimfcpppy tsqkvfgark dgallplvnk smiyisslha ngaslsvart sstegrhsir
      301 wikmsgninl hiayrywdft fatqilytfc fytdtqkvsk fllsneyqgl nstyplti
//
LOCUS       XP_016706589             314 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1b isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706589
VERSION     XP_016706589.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706589.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="thaumatin-like protein 1b isoform X2"
                     /calculated_mol_wt=33414
     Region          31..247
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..314
                     /gene="LOC107921221"
                     /coded_by="XM_016851100.2:415..1359"
                     /db_xref="GeneID:107921221"
ORIGIN      
        1 mdrrhlsstf vlllfisffs evnpasfkiv nkcrhtiwpg flsgantahl tttgfvlkpg
       61 ksrtvtipks wsgrlwgrtl cgvdssrkfv cqsgdcgsgq iecsgngakp patlaeftln
      121 gaggldfydv slvdgynlpm livvkggkgg ncsatgclld lngacpselr varqnggggv
      181 gcrsaceafg dpeyccsgpf gtpnvcrpsr yslffkhacp raysyayddt tstytcagad
      241 yvimfcpppy tsqkvfgark dgallplvnk smiyisslha ngaslsgllq lqstvpaasf
      301 tmaiflfwql iltl
//
LOCUS       XP_016706590             288 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1b isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016706590
VERSION     XP_016706590.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706590.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="thaumatin-like protein 1b isoform X3"
                     /calculated_mol_wt=30493
     Region          31..247
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..288
                     /gene="LOC107921221"
                     /coded_by="XM_016851101.2:415..1281"
                     /db_xref="GeneID:107921221"
ORIGIN      
        1 mdrrhlsstf vlllfisffs evnpasfkiv nkcrhtiwpg flsgantahl tttgfvlkpg
       61 ksrtvtipks wsgrlwgrtl cgvdssrkfv cqsgdcgsgq iecsgngakp patlaeftln
      121 gaggldfydv slvdgynlpm livvkggkgg ncsatgclld lngacpselr varqnggggv
      181 gcrsaceafg dpeyccsgpf gtpnvcrpsr yslffkhacp raysyayddt tstytcagad
      241 yvimfcpppy tsqkvfgark dgallplvnk smiyisslha ngaslsgk
//
LOCUS       XP_016706591             303 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 [Gossypium hirsutum].
ACCESSION   XP_016706591
VERSION     XP_016706591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851102.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..303
                     /product="uncharacterized protein At2g29880"
                     /calculated_mol_wt=34667
     Region          15..109
                     /region_name="Myb_DNA-bind_3"
                     /note="Myb/SANT-like DNA-binding domain; pfam12776"
                     /db_xref="CDD:432776"
     CDS             1..303
                     /gene="LOC107921222"
                     /coded_by="XM_016851102.2:136..1047"
                     /db_xref="GeneID:107921222"
ORIGIN      
        1 msatqegvvc rakaewtpsr daflvelfie qhncgrtayn efkndvirsv trdfnnkfgm
       61 nleenqiknr ynvmkkdygv vktllghngf gwdetrqmvv addkvwdnyi avrsearpfr
      121 rksfplykqm siifegertt gksmpntapi iteegnsnte tvrsseptnv ptqvvegtld
      181 sdsiirisdk qpkkrksvap rasahkkkvc ydagepiena iyemfsavkm ralqrdasne
      241 rtlyhkclee lqhleeldda eelddaeftk svnvlkddkn aiafmtikgp rrliwlrsiw
      301 qas
//
LOCUS       XP_040943366             354 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_040943366
VERSION     XP_040943366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087432.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..354
                     /product="thaumatin-like protein 1"
                     /calculated_mol_wt=36253
     Region          35..244
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..354
                     /gene="LOC107921001"
                     /coded_by="XM_041087432.1:385..1449"
                     /db_xref="GeneID:107921001"
ORIGIN      
        1 mdllhsfssl alilylivlt lnskgalgas ftfvnrcgyt vwpgilanag sptldstgfe
       61 lpkdssrsfq aptgwsgrfw grtgctfdgs gsgtcvtgdc gsgqmecngl gaappvtlae
      121 ftlgtggqdf ydvslvdgyn ipmivegsgg sgfcastgct tdlnrqcpse lrvgdgdack
      181 saceafgspe yccsgaystp atckpsvyse mfkaacprsy syayddatst ftctgadytv
      241 tfcpsspsqk ssrdatpate atpvtgstsq gsgtqpgfty sgngygysvs gygypgsgss
      301 tgsgsgqtml tdgswlagla mgdsprtips ptflvpfalm astalcflfs lvhl
//
LOCUS       XP_040943367             555 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943367
VERSION     XP_040943367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087433.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..555
                     /product="endo-1,4-beta-xylanase 5 isoform X1"
                     /calculated_mol_wt=62615
     Region          247..494
                     /region_name="Glyco_10"
                     /note="Glycosyl hydrolase family 10; smart00633"
                     /db_xref="CDD:214750"
     CDS             1..555
                     /gene="LOC107921066"
                     /coded_by="XM_041087433.1:87..1754"
                     /db_xref="GeneID:107921066"
ORIGIN      
        1 mkhslvfggf waffillsgs lvasydgply dftaytecka qpeeplyqgg ilkdetpimr
       61 paifgktatg fytpafllkn ltvgnfycfs twikiqgans aliraslkte nrtyncigtv
      121 lakngcwsfl kggfvldsps nlalllfqns ddkdiditid ssslqsftdq ewrfnqqfmi
      181 ntqrkravti hvsdqqgnrl qgaaitinqv skdfpfgsai ahtilgnlpy qnwfverfna
      241 avfenelkwy atepdqgktn ytladqmlef vrahqiiarg hnifwedpky tpawvrnltg
      301 pdlqsavnsr iqslmskyke efihwdvsne mlhfdfyeqr lgpdatlhfy etahqsdpla
      361 tlfmnefnvv etcsdvkstv dtyierirel esggmymdgi gleshftvpn lplmravidk
      421 latlrlpiwl tevdisssvg kelqgvyleq vlregfshps vngimlwtal hpkgcyemcl
      481 tdgnfknlpa gdvvdkllke wesgemkgvt gehgsysfyg flgeykvnvg ygdraanftf
      541 slppsgetkh fsihl
//
LOCUS       XP_016706407             555 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706407
VERSION     XP_016706407.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706407.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..555
                     /product="endo-1,4-beta-xylanase 5 isoform X1"
                     /calculated_mol_wt=62615
     Region          247..494
                     /region_name="Glyco_10"
                     /note="Glycosyl hydrolase family 10; smart00633"
                     /db_xref="CDD:214750"
     CDS             1..555
                     /gene="LOC107921066"
                     /coded_by="XM_016850918.2:113..1780"
                     /db_xref="GeneID:107921066"
ORIGIN      
        1 mkhslvfggf waffillsgs lvasydgply dftaytecka qpeeplyqgg ilkdetpimr
       61 paifgktatg fytpafllkn ltvgnfycfs twikiqgans aliraslkte nrtyncigtv
      121 lakngcwsfl kggfvldsps nlalllfqns ddkdiditid ssslqsftdq ewrfnqqfmi
      181 ntqrkravti hvsdqqgnrl qgaaitinqv skdfpfgsai ahtilgnlpy qnwfverfna
      241 avfenelkwy atepdqgktn ytladqmlef vrahqiiarg hnifwedpky tpawvrnltg
      301 pdlqsavnsr iqslmskyke efihwdvsne mlhfdfyeqr lgpdatlhfy etahqsdpla
      361 tlfmnefnvv etcsdvkstv dtyierirel esggmymdgi gleshftvpn lplmravidk
      421 latlrlpiwl tevdisssvg kelqgvyleq vlregfshps vngimlwtal hpkgcyemcl
      481 tdgnfknlpa gdvvdkllke wesgemkgvt gehgsysfyg flgeykvnvg ygdraanftf
      541 slppsgetkh fsihl
//
LOCUS       XP_040943368             497 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943368
VERSION     XP_040943368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087434.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="endo-1,4-beta-xylanase 5 isoform X2"
                     /calculated_mol_wt=56170
     Region          189..436
                     /region_name="Glyco_10"
                     /note="Glycosyl hydrolase family 10; smart00633"
                     /db_xref="CDD:214750"
     CDS             1..497
                     /gene="LOC107921066"
                     /coded_by="XM_041087434.1:118..1611"
                     /db_xref="GeneID:107921066"
ORIGIN      
        1 mrpaifgkta tgfytpafll knltvgnfyc fstwikiqga nsaliraslk tenrtyncig
       61 tvlakngcws flkggfvlds psnlalllfq nsddkdidit idssslqsft dqewrfnqqf
      121 mintqrkrav tihvsdqqgn rlqgaaitin qvskdfpfgs aiahtilgnl pyqnwfverf
      181 naavfenelk wyatepdqgk tnytladqml efvrahqiia rghnifwedp kytpawvrnl
      241 tgpdlqsavn sriqslmsky keefihwdvs nemlhfdfye qrlgpdatlh fyetahqsdp
      301 latlfmnefn vvetcsdvks tvdtyierir elesggmymd gigleshftv pnlplmravi
      361 dklatlrlpi wltevdisss vgkelqgvyl eqvlregfsh psvngimlwt alhpkgcyem
      421 cltdgnfknl pagdvvdkll kewesgemkg vtgehgsysf ygflgeykvn vgygdraanf
      481 tfslppsget khfsihl
//
LOCUS       XP_016708051             553 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NUCLEAR FUSION DEFECTIVE 4 [Gossypium hirsutum].
ACCESSION   XP_016708051
VERSION     XP_016708051.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852562.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708051.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..553
                     /product="protein NUCLEAR FUSION DEFECTIVE 4"
                     /calculated_mol_wt=59772
     Region          13..519
                     /region_name="MFS_Mch1p_like"
                     /note="Monocarboxylate transporter-homologous (Mch) 1
                     protein and similar transporters of the Major Facilitator
                     Superfamily of transporters; cd17354"
                     /db_xref="CDD:340912"
     Site            order(23..24,27..28,31,65,122..123,125..127,130,149,
                     152..153,156,342,345..346,349..351,354,379,383,437..438,
                     442,446,462,465..466,469..470,473)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340912"
     CDS             1..553
                     /gene="LOC107922493"
                     /coded_by="XM_016852562.2:145..1806"
                     /db_xref="GeneID:107922493"
ORIGIN      
        1 mgireshtfs awkwlgfvsa vwvqtisgnn ytfsnysdai ktlmnltqlq lnnlsvakdv
       61 gkafgllagl asdrlptpvi lligaiegli gygaqwlvvs qkihplpywq mcifmclggn
      121 sttwmntavl vtcirnfrrn rgpvsgilkg yvglstaift dlcsalfsdd parflvmlav
      181 ipfavclvai lflreipqst svaaekeear yfaifnivav vvavylltyd ligstnqvfs
      241 lvfavillil lasplavpiy afvkswrlvg feadmerqqp llkeettspp aetkeiitev
      301 aaaasaddat vlvektkpvi geehtimeam qtwdfwvlft sflcgvgtgm avinnmaqig
      361 lalghadvsi fisltsiwgf fgriisgsvs eyflkkagtp rplwnaasqi lmavglllma
      421 lalpgclyig sivvgmcygv rlavtvpvas elfglkyygl lynililnlp igsflfsgll
      481 agylydaqat ptpgggntcv gahcyglvfi imamasligf gldvllairt kniytqifns
      541 rkpkkslaas ngq
//
LOCUS       XP_016707651             559 aa            linear   PLN 06-AUG-2024
DEFINITION  CTL-like protein DDB_G0288717 [Gossypium hirsutum].
ACCESSION   XP_016707651
VERSION     XP_016707651.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852162.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707651.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..559
                     /product="CTL-like protein DDB_G0288717"
                     /calculated_mol_wt=62175
     Region          232..526
                     /region_name="Choline_transpo"
                     /note="Plasma-membrane choline transporter; pfam04515"
                     /db_xref="CDD:461337"
     CDS             1..559
                     /gene="LOC107922242"
                     /coded_by="XM_016852162.2:283..1962"
                     /db_xref="GeneID:107922242"
ORIGIN      
        1 mgsteedttt skptslydaa sstepllfkp ttgsaypspp ieeppqsgps esdptqslqi
       61 sfnygprpfk dlpflilfll fvlctfafgi fsifhrngny snvsaftyds nstscvqdts
      121 flssqlwvse tsffalssss lwtylvwtlv itsvlsvpic lllllllkhy tkqivyvllp
      181 ffiimpvffd vywfvactls sscsdafplv yrilvlifil livgvivwii vanwhrielt
      241 vriigvasda lsrnlglflv iplltvglla yyasivvflv fsrfngkiva kesngeytcv
      301 wkqdswvpay ftlailtmlw sltsmveaqv yvtsgtiaqw yfskddtkph rsirrslrna
      361 fgpssgticl sgllvfvvrv vraavdsare edvpgivnlv lrccvnalms aidflnkfti
      421 nfaaitgeay ctsarmtyel lrrnllsavf vetvstrlla gvifvlssvy aiavcailkg
      481 vsdlgvnmyt vaalawvlli lvlgffvhvl dnvidtvyic yaidkdrgev ykhevhdvyf
      541 qlpisrnsrs sypsrtldv
//
LOCUS       XP_016707135             143 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-depolymerizing factor 5 [Gossypium hirsutum].
ACCESSION   XP_016707135
VERSION     XP_016707135.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851646.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..143
                     /product="actin-depolymerizing factor 5"
                     /calculated_mol_wt=16160
     Region          3..142
                     /region_name="PLN03216"
                     /note="actin depolymerizing factor; Provisional"
                     /db_xref="CDD:178755"
     Site            10..11
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(86,88,102,129,132)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..143
                     /gene="LOC107921799"
                     /coded_by="XM_016851646.2:97..528"
                     /db_xref="GeneID:107921799"
ORIGIN      
        1 mamafkmatt gmwvtdeckn sfmemkwkkv hryivfkide ksrlvtvdkv ggpgesyddl
       61 aaslptddcr yavfdfdfvt vdncrkskif fiawsptasr irakmlyats kdglrrvldg
      121 isyevqatdp temgidvikd kan
//
LOCUS       XP_016706749             512 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid permease 4 [Gossypium hirsutum].
ACCESSION   XP_016706749
VERSION     XP_016706749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851260.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="amino acid permease 4"
                     /calculated_mol_wt=56334
     Region          60..500
                     /region_name="Aa_trans"
                     /note="Transmembrane amino acid transporter protein;
                     pfam01490"
                     /db_xref="CDD:279788"
     CDS             1..512
                     /gene="LOC107921406"
                     /coded_by="XM_016851260.2:103..1641"
                     /db_xref="GeneID:107921406"
ORIGIN      
        1 mlprsrttps rthhgvveer hdikhylqve vqpkaqnesk atnsppdysk cfdddgrlkr
       61 tgtfwtatsh iitavigsgv lslawaiaql gwvagptvlv lfafvnlyts nllaecyrsg
      121 dlvtgqrnyt ymeavkahlg gwkvklcgwi qylnlfgvai gytiaasvsm maikrsncfh
      181 ksggkdpchm ssngymisfg iaevifsqip nfshigwlsi vaaimsftys svglglgigk
      241 vaeherfdgs llgisigtvt hagtvtgmqk iwrtlqalga iafaysysvi lieiqdtvks
      301 ppaeyttmkk atlfsitvtt vfyllcgcfg yaafgdlspg nlltgfgfyn pywlldianl
      361 aivihlvgay qvfcqplfaf vekwcaqkrp ncnfvtaeye iptpfggaye lnlfrlvwrt
      421 ifvaittlia mlmpffndvv gflgamgfwp ltvyfpiemy ishkkvgrgt srwfalqiis
      481 vacffvtvaa avgsiagvvl dlktykpfkt sy
//
LOCUS       XP_040943369             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943369
VERSION     XP_040943369.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087435.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087435.1:257..1123"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943370             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943370
VERSION     XP_040943370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087436.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087436.1:1260..2126"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943371             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943371
VERSION     XP_040943371.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087437.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087437.1:1063..1929"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943372             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943372
VERSION     XP_040943372.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087438.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087438.1:1180..2046"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943373             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943373
VERSION     XP_040943373.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087439.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087439.1:816..1682"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943374             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943374
VERSION     XP_040943374.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087440.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087440.1:923..1789"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943375             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943375
VERSION     XP_040943375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087441.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087441.1:1065..1931"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943376             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943376
VERSION     XP_040943376.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087442.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087442.1:439..1305"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943377             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943377
VERSION     XP_040943377.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087443.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087443.1:868..1734"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943378             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943378
VERSION     XP_040943378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087444.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087444.1:621..1487"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943379             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943379
VERSION     XP_040943379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087445.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087445.1:1370..2236"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943380             288 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943380
VERSION     XP_040943380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087446.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X1"
                     /calculated_mol_wt=32080
     Region          20..284
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..288
                     /gene="LOC107922436"
                     /coded_by="XM_041087446.1:680..1546"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvrvplkacs ffpagvcggf nnkkrinavl fsslrkisnd inieskvdtl
       61 ldsikwddkg lavaiaqnvd tgailmqgfv nrdalattit srkatffsrs ratlwtkget
      121 snnfiniydi fvdcdrdsii ylgkpdgptc htgsetcyft sigdlfkeqe veetnlaltt
      181 lysleatisk relelagkhg kpswtkrlll denllcskir eeadelcrtl eekedsscta
      241 semadviyha mvllrrkdvk ienvlevlrr rfsqsgieek qsrastes
//
LOCUS       XP_040943381             243 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943381
VERSION     XP_040943381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087447.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X2"
                     /calculated_mol_wt=27158
     Region          10..239
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..243
                     /gene="LOC107922436"
                     /coded_by="XM_041087447.1:1260..1991"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvdtlldsik wddkglavai aqnvdtgail mqgfvnrdal attitsrkat
       61 ffsrsratlw tkgetsnnfi niydifvdcd rdsiiylgkp dgptchtgse tcyftsigdl
      121 fkeqeveetn lalttlysle atiskrelel agkhgkpswt krllldenll cskireeade
      181 lcrtleeked ssctasemad viyhamvllr rkdvkienvl evlrrrfsqs gieekqsras
      241 tes
//
LOCUS       XP_040943382             243 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943382
VERSION     XP_040943382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087448.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X2"
                     /calculated_mol_wt=27158
     Region          10..239
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..243
                     /gene="LOC107922436"
                     /coded_by="XM_041087448.1:244..975"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvdtlldsik wddkglavai aqnvdtgail mqgfvnrdal attitsrkat
       61 ffsrsratlw tkgetsnnfi niydifvdcd rdsiiylgkp dgptchtgse tcyftsigdl
      121 fkeqeveetn lalttlysle atiskrelel agkhgkpswt krllldenll cskireeade
      181 lcrtleeked ssctasemad viyhamvllr rkdvkienvl evlrrrfsqs gieekqsras
      241 tes
//
LOCUS       XP_040943383             243 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943383
VERSION     XP_040943383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087449.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X2"
                     /calculated_mol_wt=27158
     Region          10..239
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..243
                     /gene="LOC107922436"
                     /coded_by="XM_041087449.1:1065..1796"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 maisslpciq pvdtlldsik wddkglavai aqnvdtgail mqgfvnrdal attitsrkat
       61 ffsrsratlw tkgetsnnfi niydifvdcd rdsiiylgkp dgptchtgse tcyftsigdl
      121 fkeqeveetn lalttlysle atiskrelel agkhgkpswt krllldenll cskireeade
      181 lcrtleeked ssctasemad viyhamvllr rkdvkienvl evlrrrfsqs gieekqsras
      241 tes
//
LOCUS       XP_040943384             203 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943384
VERSION     XP_040943384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087450.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X3"
                     /calculated_mol_wt=22979
     Region          <1..199
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..203
                     /gene="LOC107922436"
                     /coded_by="XM_041087450.1:205..816"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 mqgfvnrdal attitsrkat ffsrsratlw tkgetsnnfi niydifvdcd rdsiiylgkp
       61 dgptchtgse tcyftsigdl fkeqeveetn lalttlysle atiskrelel agkhgkpswt
      121 krllldenll cskireeade lcrtleeked ssctasemad viyhamvllr rkdvkienvl
      181 evlrrrfsqs gieekqsras tes
//
LOCUS       XP_040943385             203 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine biosynthesis bifunctional protein hisIE, chloroplastic
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943385
VERSION     XP_040943385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087451.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..203
                     /product="histidine biosynthesis bifunctional protein
                     hisIE, chloroplastic isoform X3"
                     /calculated_mol_wt=22979
     Region          <1..199
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..203
                     /gene="LOC107922436"
                     /coded_by="XM_041087451.1:129..740"
                     /db_xref="GeneID:107922436"
ORIGIN      
        1 mqgfvnrdal attitsrkat ffsrsratlw tkgetsnnfi niydifvdcd rdsiiylgkp
       61 dgptchtgse tcyftsigdl fkeqeveetn lalttlysle atiskrelel agkhgkpswt
      121 krllldenll cskireeade lcrtleeked ssctasemad viyhamvllr rkdvkienvl
      181 evlrrrfsqs gieekqsras tes
//
LOCUS       XP_016706805             106 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 5 [Gossypium
            hirsutum].
ACCESSION   XP_016706805
VERSION     XP_016706805.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706805.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="polyadenylate-binding protein-interacting
                     protein 5"
                     /calculated_mol_wt=11232
     Region          12..54
                     /region_name="CUE_CID7_like"
                     /note="CUE domain found in CTC-interacting domain proteins
                     CID5, CID6, CID7 and similar proteins; cd14371"
                     /db_xref="CDD:270554"
     CDS             1..106
                     /gene="LOC107921469"
                     /coded_by="XM_016851316.2:963..1283"
                     /db_xref="GeneID:107921469"
ORIGIN      
        1 msgeqimdee fdmdleylrm mfpglsndsv ldvymanngd leatidmlnq lemytvessd
       61 tlpdtldigd isesissanc gtlklknvag etgasssgst esavts
//
LOCUS       XP_016706806             106 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 5 [Gossypium
            hirsutum].
ACCESSION   XP_016706806
VERSION     XP_016706806.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706806.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="polyadenylate-binding protein-interacting
                     protein 5"
                     /calculated_mol_wt=11232
     Region          12..54
                     /region_name="CUE_CID7_like"
                     /note="CUE domain found in CTC-interacting domain proteins
                     CID5, CID6, CID7 and similar proteins; cd14371"
                     /db_xref="CDD:270554"
     CDS             1..106
                     /gene="LOC107921469"
                     /coded_by="XM_016851317.2:950..1270"
                     /db_xref="GeneID:107921469"
ORIGIN      
        1 msgeqimdee fdmdleylrm mfpglsndsv ldvymanngd leatidmlnq lemytvessd
       61 tlpdtldigd isesissanc gtlklknvag etgasssgst esavts
//
LOCUS       XP_016706807             106 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 5 [Gossypium
            hirsutum].
ACCESSION   XP_016706807
VERSION     XP_016706807.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706807.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="polyadenylate-binding protein-interacting
                     protein 5"
                     /calculated_mol_wt=11232
     Region          12..54
                     /region_name="CUE_CID7_like"
                     /note="CUE domain found in CTC-interacting domain proteins
                     CID5, CID6, CID7 and similar proteins; cd14371"
                     /db_xref="CDD:270554"
     CDS             1..106
                     /gene="LOC107921469"
                     /coded_by="XM_016851318.2:844..1164"
                     /db_xref="GeneID:107921469"
ORIGIN      
        1 msgeqimdee fdmdleylrm mfpglsndsv ldvymanngd leatidmlnq lemytvessd
       61 tlpdtldigd isesissanc gtlklknvag etgasssgst esavts
//
LOCUS       XP_040943386             106 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 5 [Gossypium
            hirsutum].
ACCESSION   XP_040943386
VERSION     XP_040943386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087452.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="polyadenylate-binding protein-interacting
                     protein 5"
                     /calculated_mol_wt=11232
     Region          12..54
                     /region_name="CUE_CID7_like"
                     /note="CUE domain found in CTC-interacting domain proteins
                     CID5, CID6, CID7 and similar proteins; cd14371"
                     /db_xref="CDD:270554"
     CDS             1..106
                     /gene="LOC107921469"
                     /coded_by="XM_041087452.1:867..1187"
                     /db_xref="GeneID:107921469"
ORIGIN      
        1 msgeqimdee fdmdleylrm mfpglsndsv ldvymanngd leatidmlnq lemytvessd
       61 tlpdtldigd isesissanc gtlklknvag etgasssgst esavts
//
LOCUS       XP_040943387             106 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein-interacting protein 5 [Gossypium
            hirsutum].
ACCESSION   XP_040943387
VERSION     XP_040943387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087453.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..106
                     /product="polyadenylate-binding protein-interacting
                     protein 5"
                     /calculated_mol_wt=11232
     Region          12..54
                     /region_name="CUE_CID7_like"
                     /note="CUE domain found in CTC-interacting domain proteins
                     CID5, CID6, CID7 and similar proteins; cd14371"
                     /db_xref="CDD:270554"
     CDS             1..106
                     /gene="LOC107921469"
                     /coded_by="XM_041087453.1:831..1151"
                     /db_xref="GeneID:107921469"
ORIGIN      
        1 msgeqimdee fdmdleylrm mfpglsndsv ldvymanngd leatidmlnq lemytvessd
       61 tlpdtldigd isesissanc gtlklknvag etgasssgst esavts
//
LOCUS       XP_016708005             288 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate peroxidase 3 [Gossypium hirsutum].
ACCESSION   XP_016708005
VERSION     XP_016708005.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852516.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708005.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="L-ascorbate peroxidase 3"
                     /calculated_mol_wt=31646
     Region          1..288
                     /region_name="PLN02608"
                     /note="L-ascorbate peroxidase"
                     /db_xref="CDD:178218"
     CDS             1..288
                     /gene="LOC107922467"
                     /coded_by="XM_016852516.2:156..1022"
                     /db_xref="GeneID:107922467"
ORIGIN      
        1 mpfpvvdtey hkeiekarrd lraliafnnc apimlrlawh dagtydvstk tggpngsirn
       61 eeeythgsnn glkiaidfce evkakhhnit yadlyqlagv vavevtggpt idfvpgrkds
      121 dicpkegrlp natkgaphlk difhrmglsg kdivalsggh tlgrahpers gfdgpwtnep
      181 lkfdnsyfve llkgesegll klptdialmd dpefreyvel yakdedaffr dyaeshkkls
      241 elgfdpsssr snsvakdsti laqstlgvav aaavvivsyi yevgkrmk
//
LOCUS       XP_016708004             264 aa            linear   PLN 06-AUG-2024
DEFINITION  myb-related protein 308 [Gossypium hirsutum].
ACCESSION   XP_016708004
VERSION     XP_016708004.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852515.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..264
                     /product="myb-related protein 308"
                     /calculated_mol_wt=29498
     Region          1..>158
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..264
                     /gene="LOC107922466"
                     /coded_by="XM_016852515.2:491..1285"
                     /db_xref="GeneID:107922466"
ORIGIN      
        1 mgrspcceka htnkgawtke eddrliayir ahgegcwrsl pkaagllrcg kscrlrwiny
       61 lrpdlkrgnf teeedeliik lhsllgnkws liagrlpgrt dneiknywnt hirrkllsrg
      121 idpathrpln easqdvttis fsgakeekek intnsnnnpi gfitkdekki pvqercpdln
      181 ldlrisppyy qqtqpesfkt ggrtlcfics lgvknskdct cstittaags sssssshsns
      241 nnssgydflg lksgileyrs lemk
//
LOCUS       XP_040943388            1907 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL3 [Gossypium hirsutum].
ACCESSION   XP_040943388
VERSION     XP_040943388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087454.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1907
                     /product="E3 ubiquitin-protein ligase UPL3"
                     /calculated_mol_wt=205513
     Region          199..>420
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Site            order(264,268,303,307,311,342,346,350)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          277..314
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          319..351
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          365..391
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1487..1902
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(1493,1521,1531,1628,1821,1868..1869,1872..1876,1896)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(1656,1659..1660,1662..1663,1672,1685,1687,
                     1697..1698,1700,1706,1711,1726,1730)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1907
                     /gene="LOC107921785"
                     /coded_by="XM_041087454.1:343..6066"
                     /db_xref="GeneID:107921785"
ORIGIN      
        1 metrsrkrae assaapsssp sgpttrshkr arlssssspa aattttprsr tsraaaalmd
       61 stttesssgs rrdrrpskan qtttsdspnl asdrgkeker dpsacdrdrd rdrdrdrdrd
      121 nrdnnsnnpe rnlglimdts ggddddndse ggvgilhqnl tsassalqgl lrklgagldd
      181 llpssamgsa ssshqsgrlk kilsglradg eegkqvealt qlcemlsigt eeslstfsvd
      241 sfvpvlvgll nhesnpdiml laaralthlc dvlpsscaav vhygavscfc arlltieymd
      301 laeqslqalk kisqehptac lragalmavl syldffstgv qrvalstaan mckklpsdas
      361 dyvmeavpll tnllqyhdsk vlehasvclt riadafassp dkldelcnhg lvtqaaslis
      421 tsnsgggqas lstptytgli rllstcasgs plgaktllll gisgilkdil sgsgisanss
      481 vppalsrpae qifeivnlan ellpplpqgt islpassnmf vkgsilmksp atssdkqens
      541 denapkvsar ekllndqpel lqqfgvdllp vliqiygssv ngpvrhkcls vigklmyfss
      601 aemiqnllsv tnissflagv lawkdphvlv pslqiaeilm eklpgtfskm fvregvvhav
      661 dqlvlignqn ataaqasple kdndsvsgts srsrryrrrs gnsnpeggsv eesknqasln
      721 igspantvei ptansniraa vsacakafkd kyfpsdpgav evgvtddlih lkslcmklna
      781 gvddqktkak gkskasgsrl vdfssskeey lidvisemla elskgdgvst fefigsgvvv
      841 allsyfscgy fsqervsdvn lpklrhlalk rlksfisval pssvdegsia pmtvlvqklq
      901 nalssverfp vvlshssrss ggsarlssgl salsqpfklr lcraqgeksl rdyssnivmi
      961 dplaslaave eflwprvqrs dnaqkpcvsv gnsdsgntps gavasspsts tpastarrhs
     1021 srsrssvnig dvarkessqe kstssskgkg kavlkpaqee srgpqtrnaa rrravldkdt
     1081 pmrpengdst sedeeldlsp veiddalvie dddisddedd dhedvlrdds lpvcmpdkvh
     1141 dvklgdsaed gttmpaasdn qinaasgsss raaavsgsds adfrssygsr gamsfaaaam
     1201 agfgsangrg irggrdrqgr pqfgnsnepp kliftvgskq lnrqltiyqa iqrqlvlded
     1261 dderyggsdf tstdgrgmws giytityqra dtqadrtsvg gsgsapasks tkscspssns
     1321 dsqthrmsll dsilqgelpc dlersnptyt iltllyvleg lnqlatrlra qivsdgfaeg
     1381 kilnldelst pgsrvpyeef ingkltpkla rqiqdalalc sgslpswcyq ltkacpflfp
     1441 fetrrqyfys tafglsraly rlqqqqgadg hgstnerevr vgrlhrqkvr vsrnrifdsa
     1501 akvmemyssq kavleveyfg evgtglgptl efytllshdl qkvglgmwrs nstwdksime
     1561 idgdeeknek tagsvggdiv qaplglfprp wppnadasea sqffkvieyf rllgrvmaka
     1621 lqdgrlldlp lstpfyklvl gqeldlydil sfdgefgkil qelhflvcrk qylestgges
     1681 saavdelcfr gtpiedlcld ftlpgypeyi lkpgdgtvdi nnleeyisfv vdatvkagii
     1741 rqmeafragf nqvfdvaslq iftpqeldyl lcgrrelwea etladhikfd hgytakspai
     1801 vnlleimgef tpeqqrafcq fvtgaprlpp gglamlnpkl tivrkhsssa iaatsngsgp
     1861 sesadddlps vmtcanylkl ppysskeimy kkllyaiyeg qgsfdls
//
LOCUS       XP_040943389            1907 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL3 [Gossypium hirsutum].
ACCESSION   XP_040943389
VERSION     XP_040943389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087455.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1907
                     /product="E3 ubiquitin-protein ligase UPL3"
                     /calculated_mol_wt=205513
     Region          199..>420
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Site            order(264,268,303,307,311,342,346,350)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          277..314
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          319..351
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          365..391
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1487..1902
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(1493,1521,1531,1628,1821,1868..1869,1872..1876,1896)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(1656,1659..1660,1662..1663,1672,1685,1687,
                     1697..1698,1700,1706,1711,1726,1730)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1907
                     /gene="LOC107921785"
                     /coded_by="XM_041087455.1:343..6066"
                     /db_xref="GeneID:107921785"
ORIGIN      
        1 metrsrkrae assaapsssp sgpttrshkr arlssssspa aattttprsr tsraaaalmd
       61 stttesssgs rrdrrpskan qtttsdspnl asdrgkeker dpsacdrdrd rdrdrdrdrd
      121 nrdnnsnnpe rnlglimdts ggddddndse ggvgilhqnl tsassalqgl lrklgagldd
      181 llpssamgsa ssshqsgrlk kilsglradg eegkqvealt qlcemlsigt eeslstfsvd
      241 sfvpvlvgll nhesnpdiml laaralthlc dvlpsscaav vhygavscfc arlltieymd
      301 laeqslqalk kisqehptac lragalmavl syldffstgv qrvalstaan mckklpsdas
      361 dyvmeavpll tnllqyhdsk vlehasvclt riadafassp dkldelcnhg lvtqaaslis
      421 tsnsgggqas lstptytgli rllstcasgs plgaktllll gisgilkdil sgsgisanss
      481 vppalsrpae qifeivnlan ellpplpqgt islpassnmf vkgsilmksp atssdkqens
      541 denapkvsar ekllndqpel lqqfgvdllp vliqiygssv ngpvrhkcls vigklmyfss
      601 aemiqnllsv tnissflagv lawkdphvlv pslqiaeilm eklpgtfskm fvregvvhav
      661 dqlvlignqn ataaqasple kdndsvsgts srsrryrrrs gnsnpeggsv eesknqasln
      721 igspantvei ptansniraa vsacakafkd kyfpsdpgav evgvtddlih lkslcmklna
      781 gvddqktkak gkskasgsrl vdfssskeey lidvisemla elskgdgvst fefigsgvvv
      841 allsyfscgy fsqervsdvn lpklrhlalk rlksfisval pssvdegsia pmtvlvqklq
      901 nalssverfp vvlshssrss ggsarlssgl salsqpfklr lcraqgeksl rdyssnivmi
      961 dplaslaave eflwprvqrs dnaqkpcvsv gnsdsgntps gavasspsts tpastarrhs
     1021 srsrssvnig dvarkessqe kstssskgkg kavlkpaqee srgpqtrnaa rrravldkdt
     1081 pmrpengdst sedeeldlsp veiddalvie dddisddedd dhedvlrdds lpvcmpdkvh
     1141 dvklgdsaed gttmpaasdn qinaasgsss raaavsgsds adfrssygsr gamsfaaaam
     1201 agfgsangrg irggrdrqgr pqfgnsnepp kliftvgskq lnrqltiyqa iqrqlvlded
     1261 dderyggsdf tstdgrgmws giytityqra dtqadrtsvg gsgsapasks tkscspssns
     1321 dsqthrmsll dsilqgelpc dlersnptyt iltllyvleg lnqlatrlra qivsdgfaeg
     1381 kilnldelst pgsrvpyeef ingkltpkla rqiqdalalc sgslpswcyq ltkacpflfp
     1441 fetrrqyfys tafglsraly rlqqqqgadg hgstnerevr vgrlhrqkvr vsrnrifdsa
     1501 akvmemyssq kavleveyfg evgtglgptl efytllshdl qkvglgmwrs nstwdksime
     1561 idgdeeknek tagsvggdiv qaplglfprp wppnadasea sqffkvieyf rllgrvmaka
     1621 lqdgrlldlp lstpfyklvl gqeldlydil sfdgefgkil qelhflvcrk qylestgges
     1681 saavdelcfr gtpiedlcld ftlpgypeyi lkpgdgtvdi nnleeyisfv vdatvkagii
     1741 rqmeafragf nqvfdvaslq iftpqeldyl lcgrrelwea etladhikfd hgytakspai
     1801 vnlleimgef tpeqqrafcq fvtgaprlpp gglamlnpkl tivrkhsssa iaatsngsgp
     1861 sesadddlps vmtcanylkl ppysskeimy kkllyaiyeg qgsfdls
//
LOCUS       XP_016706356             843 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-galactosidase 13 [Gossypium hirsutum].
ACCESSION   XP_016706356
VERSION     XP_016706356.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850867.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706356.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..843
                     /product="beta-galactosidase 13"
                     /calculated_mol_wt=94810
     Region          49..843
                     /region_name="PLN03059"
                     /note="beta-galactosidase; Provisional"
                     /db_xref="CDD:166698"
     CDS             1..843
                     /gene="LOC107921016"
                     /coded_by="XM_016850867.2:121..2652"
                     /db_xref="GeneID:107921016"
ORIGIN      
        1 mveprrllvi fflstlliay snanveeiqk gteegdeegk vggqkaqgvt ydarsliing
       61 krellfsgai hyprstpdmw pdlikkakqg gintietyvf wnghepvegq ynfegefdlv
      121 kfiklihehk lyavvrvgpf iqaewnhggl pywlrevpgi ifrsdnepfk khmkrfvtmi
      181 vdklkqeklf apqggpiila qieneyntiq rafrekgdsy vqwagklals lnanvpwimc
      241 kqrdapdpvi ntcngrhcgd tfygpnkrnk palwtenwta ryrvfgdpps qrsaedlays
      301 varffskngs mvnyymyygg tnfgrtsasf tttryydeap ldefglqrep kwghlkdvhr
      361 alslckralf wgvpttlklg pdqqaivwqq pgtsacaafl annntrlaqh vnfrgqdirl
      421 parsisvlpd cktvvfntql vttqhnsrnf vrseianknf nwemyrevpp vglgfkfdvp
      481 relfhltkdt tdyawyttsl klgrrdlpmk knvspvlrva slghgihayv ngeyagsahg
      541 skieksfvfq ravslkegen hiallgylvg lpdsgaymek rfagprsiti lglntgtldi
      601 sqngwghqvg idgekkklft eegsksvqwt kpdqggpltw ykgyfdapeg dnpvaivmtg
      661 mgkgmvwing rsigrywnny lsplkkptqs eyhipraylk pknlivllee eegnpkdvhi
      721 vtvnrdtics avseihppsp rlfdtkngsl qpkvndlkpr aelicpgkkq ivavefasyg
      781 dpfgacgayf ignctapesk qvvekyclgk pscqipldsi hfsdqndact hlrktlavqv
      841 kca
//
LOCUS       XP_040943391             605 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-galactosidase 13 [Gossypium hirsutum].
ACCESSION   XP_040943391
VERSION     XP_040943391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087457.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..605
                     /product="beta-galactosidase 13"
                     /calculated_mol_wt=67523
     Region          <1..605
                     /region_name="PLN03059"
                     /note="beta-galactosidase; Provisional"
                     /db_xref="CDD:166698"
     CDS             1..605
                     /gene="LOC107921245"
                     /coded_by="XM_041087457.1:836..2653"
                     /db_xref="GeneID:107921245"
ORIGIN      
        1 mckqrdapdp vinicngrhc gdtfygpnkr nkpalwtenw taqyrvfgdp psqrsaedla
       61 ysvarffskn gsmvnyymyy ggtnfgrtsa sftttryyde apldefglqr epkwghlkdv
      121 hralslckra lfwgvpttlk lgpdqqaivw qqpgtsacaa flannntrla qhvnfrgqdi
      181 rlparsisvl pdcktvvfns qlvttqhnsr nfvrseianm nfnwemyrev ppvglgfkfd
      241 vprelfhltk dttdyawytt slklgrrdlp mkknvspvlr vaslghgiha yvngeyagsa
      301 hgskveksfv fqravslkeg enhiallgyl vglpdsgaym ekrfagprsi tilglntgtl
      361 disqngwghq vgidgekkkl fteegsksvq wtkpdqggpl twykgyfdap egdnpvaivm
      421 tgmgkgmvwi ngrsigrywn nylsplkkpt qseyhipray lkpknlivll eeeegnpkdv
      481 hivtvnrdti csavseihpp sprlfetkng slqpkvndlk praelicpgk kqivavefas
      541 ygdpfgacga yfignctape skqvvekycl gkpscqipld sihfsdqnda cthlrktlav
      601 qvkca
//
LOCUS       XP_016706610             401 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MCM10 homolog [Gossypium hirsutum].
ACCESSION   XP_016706610
VERSION     XP_016706610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851121.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..401
                     /product="protein MCM10 homolog"
                     /calculated_mol_wt=44820
     Region          216..261
                     /region_name="zf-primase"
                     /note="Primase zinc finger; pfam09329"
                     /db_xref="CDD:462758"
     CDS             1..401
                     /gene="LOC107921247"
                     /coded_by="XM_016851121.2:182..1387"
                     /db_xref="GeneID:107921247"
ORIGIN      
        1 mtsheddldl llslqervle tppaspssph sqspgylsdd gsprrrgkad lsvfkdfved
       61 cldyepksve rhakpkpqss ndiqvekfsg lrirkqlvsp aklsehlsdi rfvrlptlkn
      121 llvgdtlygc watigvliek gipktssigk sysiwkigcl dkntvslflf gdayeqnske
      181 qvgtvfalfs ctvrkdtkgs gfslsvaapn qilkigtsad ygvckgrrkd gmactiilnk
      241 rqgaycqyhk skaserystk rtelmggnlr rafrnpprse gifmvdplsd rtnmekaskp
      301 vkllsvdalk ralrngdkvt tnrhsqgirf lnavtgemst klvngaskkp dqqtvgsekr
      361 kessvkqdts lkrnnhldsk rrkleqeqtl edhwnqrwkl d
//
LOCUS       XP_016707669             198 aa            linear   PLN 06-AUG-2024
DEFINITION  rac-like GTP-binding protein ARAC3 [Gossypium hirsutum].
ACCESSION   XP_016707669
VERSION     XP_016707669.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852180.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707669.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..198
                     /product="rac-like GTP-binding protein ARAC3"
                     /calculated_mol_wt=21743
     Region          6..178
                     /region_name="Rop_like"
                     /note="Rho-related protein from plants (Rop)-like;
                     cd04133"
                     /db_xref="CDD:206705"
     Site            order(8,38..39,41..42,44,46,55,59..60,62..64,70,73)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206705"
     Site            13..20
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206705"
     Site            order(16..21,60..61,63,119,121,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206705"
     Site            37..43
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206705"
     Site            38
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206705"
     Site            order(39,62,70,72)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206705"
     Site            order(39..40,64,70)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206705"
     Site            order(40..41,70,73)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206705"
     Site            60..63
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206705"
     Site            order(63..64,70..73,78..80)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206705"
     Site            118..121
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206705"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206705"
     CDS             1..198
                     /gene="LOC107922248"
                     /coded_by="XM_016852180.2:300..896"
                     /db_xref="GeneID:107922248"
ORIGIN      
        1 msasrfikcv tvgdgavgkt cmlisytsnt fptdyvptvf dnfsanvvvd gntvnlglwd
       61 tagqedynrl rplsyrgadv fllafslisk asyenvskkw ipelrhyapg vpiilvgtkl
      121 dlrddkqffv dhpgavpitt aqgeelrkli gapvyiecss ktqqnvkavf daaikvvlqp
      181 pkqkkkkkrk sqkacsil
//
LOCUS       XP_016707670             149 aa            linear   PLN 06-AUG-2024
DEFINITION  SUMO-conjugating enzyme UBC9 [Gossypium hirsutum].
ACCESSION   XP_016707670
VERSION     XP_016707670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852181.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..149
                     /product="SUMO-conjugating enzyme UBC9"
                     /calculated_mol_wt=16534
     Region          3..134
                     /region_name="UBCc_UBE2D"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; cd23792"
                     /db_xref="CDD:467412"
     CDS             1..149
                     /gene="LOC107922249"
                     /coded_by="XM_016852181.2:788..1237"
                     /db_xref="GeneID:107922249"
ORIGIN      
        1 maskrilkel kdlqrdppas csagpvgenm fhwqatiigp ndspyaggvf lvtihfppdy
       61 pfkppkiafr tkvfhpnins ngnicldilk eqwspaltis kvllsicsll tdpnpddplv
      121 peiarmckad klkyiimkgk rrkkkvviv
//
LOCUS       XP_016706359             684 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like serine/threonine-protein kinase At5g57670
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706359
VERSION     XP_016706359.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706359.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..684
                     /product="probable receptor-like serine/threonine-protein
                     kinase At5g57670 isoform X1"
                     /calculated_mol_wt=75807
     Region          8..125
                     /region_name="USP-like"
                     /note="universal stress protein (USP) and similar
                     proteins; cd00293"
                     /db_xref="CDD:467483"
     Region          341..606
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(341..345,349,361,363,391,407..410,414,416,460,462,
                     464..465,467,478,481,499..502)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(341..345,349,361,363,391,407..410,414,460,462,
                     464..465,467,478)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(345,414,416,460,462,464,481,499..502)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(477..484,495..502)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..684
                     /gene="LOC107921021"
                     /coded_by="XM_016850870.2:541..2595"
                     /db_xref="GeneID:107921021"
ORIGIN      
        1 mpsdkkknvl vgirldsesr dllswalgkv aepgdcvvai hvtrnsdhal gqklllegyl
       61 eayeglcsik kvdlkgqihk gnsirkvlir eainygaval vvgidkrspl ggwtstaryc
      121 tkrlptttnv vainkgkivf ersnknelsg lkgdprpsly lteklgarec qseygdsevg
      181 seissfegiq sskdgsrtss edskieilnv ihegkgipsr sislfagdnm dykpgwplll
      241 rassappqak harsmsvvkw vmnlpsrsph dhsprgstik eielnqlgdd ndgnetnssm
      301 qyelqkclev llntnssdcr wfsygilkaa tdqfstaenl igeggsnrvy kgilpdnkav
      361 avkilesske ackdfaneie iisslkhkhi mpvigicikd rdlisvydfs skgsleeilh
      421 gknkgkhalp welrynvavg iaegldylhn elsrpvihrd ikssnillsd gfepklsdfg
      481 laiwgptdss fliqadvvgt fgylapeyfm ygklsdkidv yafgvvllel lsgkrpisfe
      541 nlkgqqslvm wakpiiesgd vkgildpnln gninetqmlr mvraaalcit rsgrlrptmr
      601 qilellrgek evekwgetpn eemesqeqhd ddevypnsrp elhlsvamld vdedctsfss
      661 meqssnfstd eylkerwsrs ssfn
//
LOCUS       XP_016706360             683 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like serine/threonine-protein kinase At5g57670
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706360
VERSION     XP_016706360.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850871.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706360.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..683
                     /product="probable receptor-like serine/threonine-protein
                     kinase At5g57670 isoform X2"
                     /calculated_mol_wt=75736
     Region          8..125
                     /region_name="USP-like"
                     /note="universal stress protein (USP) and similar
                     proteins; cd00293"
                     /db_xref="CDD:467483"
     Region          340..605
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(340..344,348,360,362,390,406..409,413,415,459,461,
                     463..464,466,477,480,498..501)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(340..344,348,360,362,390,406..409,413,459,461,
                     463..464,466,477)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(344,413,415,459,461,463,480,498..501)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(476..483,494..501)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..683
                     /gene="LOC107921021"
                     /coded_by="XM_016850871.2:541..2592"
                     /db_xref="GeneID:107921021"
ORIGIN      
        1 mpsdkkknvl vgirldsesr dllswalgkv aepgdcvvai hvtrnsdhal gqklllegyl
       61 eayeglcsik kvdlkgqihk gnsirkvlir eainygaval vvgidkrspl ggwtstaryc
      121 tkrlptttnv vainkgkivf ersnknelsg lkgdprpsly lteklgarec qseygdsevg
      181 seissfegiq sskdgsrtss edskieilnv ihegkgipsr sislfagdnm dykpgwplll
      241 rassappqak harsmsvvkw vmnlpsrsph dhsprgstik eielnqlgdd ndgnetnssm
      301 qyelqkclev llntnssdcr wfsygilkaa tdqfstenli geggsnrvyk gilpdnkava
      361 vkilesskea ckdfaneiei isslkhkhim pvigicikdr dlisvydfss kgsleeilhg
      421 knkgkhalpw elrynvavgi aegldylhne lsrpvihrdi kssnillsdg fepklsdfgl
      481 aiwgptdssf liqadvvgtf gylapeyfmy gklsdkidvy afgvvllell sgkrpisfen
      541 lkgqqslvmw akpiiesgdv kgildpnlng ninetqmlrm vraaalcitr sgrlrptmrq
      601 ilellrgeke vekwgetpne emesqeqhdd devypnsrpe lhlsvamldv dedctsfssm
      661 eqssnfstde ylkerwsrss sfn
//
LOCUS       XP_040943392             455 aa            linear   PLN 06-AUG-2024
DEFINITION  PTI1-like tyrosine-protein kinase 2 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943392
VERSION     XP_040943392.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087458.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..455
                     /product="PTI1-like tyrosine-protein kinase 2 isoform X3"
                     /calculated_mol_wt=50967
     Region          112..377
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(112..116,120,132,134,162,178..181,185,187,231,233,
                     235..236,238,249,252,270..273)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(112..116,120,132,134,162,178..181,185,231,233,
                     235..236,238,249)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(116,185,187,231,233,235,252,270..273)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(248..255,266..273)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..455
                     /gene="LOC107921021"
                     /coded_by="XM_041087458.1:488..1855"
                     /db_xref="GeneID:107921021"
ORIGIN      
        1 mdykpgwpll lrassappqa kharsmsvvk wvmnlpsrsp hdhsprgsti keielnqlgd
       61 dndgnetnss mqyelqkcle vllntnssdc rwfsygilka atdqfstaen ligeggsnrv
      121 ykgilpdnka vavkilessk eackdfanei eiisslkhkh impvigicik drdlisvydf
      181 sskgsleeil hgknkgkhal pwelrynvav giaegldylh nelsrpvihr dikssnills
      241 dgfepklsdf glaiwgptds sfliqadvvg tfgylapeyf mygklsdkid vyafgvvlle
      301 llsgkrpisf enlkgqqslv mwakpiiesg dvkgildpnl ngninetqml rmvraaalci
      361 trsgrlrptm rqilellrge kevekwgetp neemesqeqh dddevypnsr pelhlsvaml
      421 dvdedctsfs smeqssnfst deylkerwsr sssfn
//
LOCUS       XP_016706450             261 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706450
VERSION     XP_016706450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850961.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="basic leucine zipper 19 isoform X1"
                     /calculated_mol_wt=28118
     Region          89..142
                     /region_name="bZIP_2"
                     /note="Basic region leucine zipper; pfam07716"
                     /db_xref="CDD:462244"
     CDS             1..261
                     /gene="LOC107921093"
                     /coded_by="XM_016850961.2:430..1215"
                     /db_xref="GeneID:107921093"
ORIGIN      
        1 mddgeldysn qevfsvnnmg dipsscsmds ffdellndsh acththtcnp pgpdnshtht
       61 cfhfhtkivp assedkaaid gtavsgenks kkrplgnrea vrkyrekvka raasledevv
      121 rlralnqqlv krlqgqaale aevarlkcll vdirgriege igpfpyqkpa tnvnmmnvpg
      181 ayvmnpcnvp cndqmyclhp gfedktgeaa alngqgfngc dfdniqclan qnstggigsa
      241 gsngnysgtk rrkgvhsata g
//
LOCUS       XP_040943393             261 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943393
VERSION     XP_040943393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087459.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..261
                     /product="basic leucine zipper 19 isoform X1"
                     /calculated_mol_wt=28118
     Region          89..142
                     /region_name="bZIP_2"
                     /note="Basic region leucine zipper; pfam07716"
                     /db_xref="CDD:462244"
     CDS             1..261
                     /gene="LOC107921093"
                     /coded_by="XM_041087459.1:203..988"
                     /db_xref="GeneID:107921093"
ORIGIN      
        1 mddgeldysn qevfsvnnmg dipsscsmds ffdellndsh acththtcnp pgpdnshtht
       61 cfhfhtkivp assedkaaid gtavsgenks kkrplgnrea vrkyrekvka raasledevv
      121 rlralnqqlv krlqgqaale aevarlkcll vdirgriege igpfpyqkpa tnvnmmnvpg
      181 ayvmnpcnvp cndqmyclhp gfedktgeaa alngqgfngc dfdniqclan qnstggigsa
      241 gsngnysgtk rrkgvhsata g
//
LOCUS       XP_040943394             257 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 19 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943394
VERSION     XP_040943394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087460.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..257
                     /product="basic leucine zipper 19 isoform X2"
                     /calculated_mol_wt=27738
     Region          89..142
                     /region_name="bZIP_2"
                     /note="Basic region leucine zipper; pfam07716"
                     /db_xref="CDD:462244"
     CDS             1..257
                     /gene="LOC107921093"
                     /coded_by="XM_041087460.1:199..972"
                     /db_xref="GeneID:107921093"
ORIGIN      
        1 mddgeldysn qevfsvnnmg dipsscsmds ffdellndsh acththtcnp pgpdnshtht
       61 cfhfhtkivp assedkaaid gtavsgenks kkrplgnrea vrkyrekvka raasledevv
      121 rlralnqqlv krlqgqaale aevarlkcll vdirgriege igpfpyqkpa tnvnmmnvpg
      181 ayvmnpcnvp cndqmyclhp gfedktgeaa alngqgfngc dfdniqclan qnstggigsa
      241 gsngnysgtk rrkatag
//
LOCUS       XP_016707907             153 aa            linear   PLN 06-AUG-2024
DEFINITION  heavy metal-associated isoprenylated plant protein 26 [Gossypium
            hirsutum].
ACCESSION   XP_016707907
VERSION     XP_016707907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852418.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..153
                     /product="heavy metal-associated isoprenylated plant
                     protein 26"
                     /calculated_mol_wt=16874
     Region          29..89
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(34..36,39)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     CDS             1..153
                     /gene="LOC107922398"
                     /coded_by="XM_016852418.2:412..873"
                     /db_xref="GeneID:107922398"
ORIGIN      
        1 mgvldhvsdl fdcshsskhk krkqlqtvei kvkmdcegce rkvkksvegm kgvtqvdver
       61 kaskltvvgy vdpkkvvarv ahrtgkkvel wpyvpydvva hpyapgvydk kapagyvrna
      121 edpqvshlar asstevrytt afsdenpaac svm
//
LOCUS       XP_016706262             280 aa            linear   PLN 06-AUG-2024
DEFINITION  probable BOI-related E3 ubiquitin-protein ligase 3 [Gossypium
            hirsutum].
ACCESSION   XP_016706262
VERSION     XP_016706262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850773.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..280
                     /product="probable BOI-related E3 ubiquitin-protein ligase
                     3"
                     /calculated_mol_wt=31869
     Region          231..269
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(233,236,248,250,254,257,264,267)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..280
                     /gene="LOC107920940"
                     /coded_by="XM_016850773.2:353..1195"
                     /db_xref="GeneID:107920940"
ORIGIN      
        1 maiqaqlysd nigfpmcgsl dlidngcglv gaaagvnqqi ssqlqqlqqf qhlqnqhqrd
       61 qtfsfgstnn nresimfekq ryeidqfiks qnerlrlllq eqrkqqyevl vkkieskasf
      121 llrqkdeeiv karnktmelq nmlkklemen qawqrvaqen eamvvslnnr leqvreeqas
      181 crfnngvdda esccecednn egimetkgng gfaavdsssq rqeeqqektt mvckccycrn
      241 ssvlflpcrh lcsckdcatf ldscpvcrtp kkaciealis
//
LOCUS       XP_016707689             385 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707689
VERSION     XP_016707689.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707689.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..385
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40562
     Region          <279..373
                     /region_name="DsbD_2"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl46328"
                     /db_xref="CDD:480668"
     CDS             1..385
                     /gene="LOC107922263"
                     /coded_by="XM_016852200.2:276..1433"
                     /db_xref="GeneID:107922263"
ORIGIN      
        1 merllysssp tpleisrkps pslsrlarfd sptlgfvpsl trpqlrrfis isckadnnps
       61 hfsyplsnps nelpslgspr vdsangstpt snflklvaik asaqrkaita gtyialsaii
      121 mfliqpifap aafatfqaga kaggtaaaav rggvlrtell ssawtgffag clhtlsgpdh
      181 laalaplsig rtrmesavvg alwgcghdag qvifgllfll lkdrlhieii rtwgtrvvgl
      241 tllvigamgi reasevptpc valengecdv svyetlenpa vgkkkigfat fatgivhglq
      301 pdalmmvlpa lalpsrvaga aflimfllgt vvamgsytvf igscsqalkd ripriteklt
      361 wasslvaial gvaiivsqff gfsly
//
LOCUS       XP_016706587             386 aa            linear   PLN 06-AUG-2024
DEFINITION  glycerate dehydrogenase [Gossypium hirsutum].
ACCESSION   XP_016706587
VERSION     XP_016706587.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851098.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706587.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="glycerate dehydrogenase"
                     /calculated_mol_wt=42091
     Region          1..386
                     /region_name="PLN02306"
                     /note="hydroxypyruvate reductase"
                     /db_xref="CDD:177941"
     Site            order(22..23,25,69..71,93,121..122,125..126,128..129,132,
                     136,138,146,148,150,152..158,160..164,182..183,187..188,
                     302..303,310,316..322,324..327,329)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240626"
     Site            order(70,94..96,119,273,320,323)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:240626"
     Site            order(95..96,123,172..176,195..196,200,203,243..245,
                     249..250,271..273,297..298,320,322..323)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:240626"
     CDS             1..386
                     /gene="LOC107921219"
                     /coded_by="XM_016851098.2:347..1507"
                     /db_xref="GeneID:107921219"
ORIGIN      
        1 makpvsievw npngkyrvis tkpmpgtrwi nllieqdcrv eictekktil svediislig
       61 nkcdgvigql tedwgetlfa alsraggkaf snmavgynnv dvnaankygv avgntpgvlt
      121 ettaelaasl slaaarrive adefmragly dgwlphlfvg nllkgqtvgv igagrigsay
      181 armmvegfkm nliyydlyqs trlekfvtay geflksngeq pvywkrassm devlreadvi
      241 slhpvldktt yhlinkesla tmkkeailvn csrgpvidev alvehlkqnp mfrvgldvfe
      301 depfmkpgla emknavivph iasaskwtre gmatlaalnv lgkikgypiw gdsnrvepfl
      361 nesvpppaac psivnakalg lpvskl
//
LOCUS       XP_016708155             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708155
VERSION     XP_016708155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852666.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..183
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21796
     CDS             1..183
                     /gene="LOC107922576"
                     /coded_by="XM_016852666.2:77..628"
                     /db_xref="GeneID:107922576"
ORIGIN      
        1 mdaekktwfw ldrtllmcll yfavdgnkqh fiatlvalil hdfvvymvkl llqdiyalfs
       61 tllhnlklrs lnksgtiegg nynsmrekee veirttakkn ekegeegsmq vqvacetcrm
      121 fkeeeamkak gkykdkykkk llqkeenfdr vkstlkekyn edrdkweeer kllkikyeem
      181 rwt
//
LOCUS       XP_016708156             156 aa            linear   PLN 06-AUG-2024
DEFINITION  SKP1-like protein 1A [Gossypium hirsutum].
ACCESSION   XP_016708156
VERSION     XP_016708156.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852667.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708156.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="SKP1-like protein 1A"
                     /calculated_mol_wt=17699
     Region          7..121
                     /region_name="BTB_POZ_SKP1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in S-phase
                     kinase-associated protein 1 (SKP1) and similar proteins;
                     cd18322"
                     /db_xref="CDD:349631"
     Site            order(29..30,34,38,41..43,45,47..48,99,102..103,105)
                     /site_type="other"
                     /note="cullin binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Site            order(91,95,99,102,107,111,114..115,117..118,121)
                     /site_type="other"
                     /note="F-box protein binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Region          107..154
                     /region_name="Skp1"
                     /note="Skp1 family, dimerization domain; pfam01466"
                     /db_xref="CDD:460222"
     CDS             1..156
                     /gene="LOC107922577"
                     /coded_by="XM_016852667.2:146..616"
                     /db_xref="GeneID:107922577"
ORIGIN      
        1 mastsrkiml rssdgetfev eeavavesqt ikhmieddca dneiplpnvt skilskvley
       61 ckkhvdaaad kektpddelk awdadfvkvd qntlfdlila anylniksll dltcqtvadm
      121 ikgktpeeir ktfnikndft peeeeevrre nqwafe
//
LOCUS       XP_040943395             147 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g60570 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943395
VERSION     XP_040943395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087461.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..147
                     /product="F-box/kelch-repeat protein At5g60570 isoform X1"
                     /calculated_mol_wt=16439
     CDS             1..147
                     /gene="LOC107922473"
                     /coded_by="XM_041087461.1:396..839"
                     /db_xref="GeneID:107922473"
ORIGIN      
        1 mvpntnrrhs slifllsafr crnlhctnrr wrssssledl eawtrraeim kccdkvkkyd
       61 kvnnswsvvk rlpvradssy gwglafkacr nsllvigagg hgghddgviv lhswnpdegn
      121 rdgqewnvla vkaragtfvy ncavmgc
//
LOCUS       XP_016708015             123 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708015
VERSION     XP_016708015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="CTP synthase 1 isoform X2"
                     /calculated_mol_wt=14224
     Region          <39..>99
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..123
                     /gene="LOC107922473"
                     /coded_by="XM_016852526.2:1910..2281"
                     /db_xref="GeneID:107922473"
ORIGIN      
        1 mvpntnrrhs slifllsafr crnlhctnrr wrsssslegk dnfclihvil ipdlltfcla
       61 qplldntkmk lsqfchveva nilnihyvpn iwhiplllrv ysiavlpfvw nlkipslill
      121 fsf
//
LOCUS       XP_040943396              80 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943396
VERSION     XP_040943396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087462.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..80
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=9281
     Region          <39..>77
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..80
                     /gene="LOC107922473"
                     /coded_by="XM_041087462.1:1910..2152"
                     /db_xref="GeneID:107922473"
ORIGIN      
        1 mvpntnrrhs slifllsafr crnlhctnrr wrsssslegk dnfclihvil ipdlltfcla
       61 qplldntkmk lsqfchvefy
//
LOCUS       XP_040943397              79 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943397
VERSION     XP_040943397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087463.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..79
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=9084
     Region          <39..>77
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..79
                     /gene="LOC107922473"
                     /coded_by="XM_041087463.1:1910..2149"
                     /db_xref="GeneID:107922473"
ORIGIN      
        1 mvpntnrrhs slifllsafr crnlhctnrr wrsssslegk dnfclihvil ipdlltfcla
       61 qplldntkmk lsqfchvei
//
LOCUS       XP_016706218             307 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-splicing factor syf2 [Gossypium hirsutum].
ACCESSION   XP_016706218
VERSION     XP_016706218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..307
                     /product="pre-mRNA-splicing factor syf2"
                     /calculated_mol_wt=35901
     Region          <27..268
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          152..300
                     /region_name="SYF2"
                     /note="SYF2 splicing factor; pfam08231"
                     /db_xref="CDD:462400"
     CDS             1..307
                     /gene="LOC107920904"
                     /coded_by="XM_016850729.2:148..1071"
                     /db_xref="GeneID:107920904"
ORIGIN      
        1 meeerrvhpd cinasnpyhe cveycfrkia eakarkdksv tetpqpehgq pvtpaayqeq
       61 dvqpgipepe espdddsdrp veeniegdit nltgrqkklf elrlkmnear kanqtamvae
      121 kkrmealpes rgiskqkwle erkkkigkll dangldlqna ymldtqeaae akykkwekdp
      181 apfgwdvfnq ktlynaykkr tknididlee ynrmkeadpe fyreasslqy gkapktsedk
      241 iekmvkelkd reekrksfsr rrkfheekdi dsindrnehf nkkierafgk ytleiknnle
      301 rgtalpd
//
LOCUS       XP_016706611             173 aa            linear   PLN 06-AUG-2024
DEFINITION  chemocyanin isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706611
VERSION     XP_016706611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851122.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..173
                     /product="chemocyanin isoform X1"
                     /calculated_mol_wt=18937
     Region          25..107
                     /region_name="Phytocyanin"
                     /note="Phytocyanins are plant blue or type I copper
                     proteins; cd04216"
                     /db_xref="CDD:259878"
     CDS             1..173
                     /gene="LOC107921248"
                     /coded_by="XM_016851122.2:222..743"
                     /db_xref="GeneID:107921248"
ORIGIN      
        1 medkigrlii liiccsilkg avsqvysvgd esgwssevdy gswsekynft vgdvleftyn
       61 kgqhnvfevt estyrtcdas sgvlakyesg ddkveltesk kywficnqsl kkvipnvalg
      121 tgmvivellm iviiisnasv vfshsvklpt sgshcphqef etdcplvsps qpp
//
LOCUS       XP_016706612             172 aa            linear   PLN 06-AUG-2024
DEFINITION  chemocyanin isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706612
VERSION     XP_016706612.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851123.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="chemocyanin isoform X2"
                     /calculated_mol_wt=18808
     Region          25..107
                     /region_name="Phytocyanin"
                     /note="Phytocyanins are plant blue or type I copper
                     proteins; cd04216"
                     /db_xref="CDD:259878"
     CDS             1..172
                     /gene="LOC107921248"
                     /coded_by="XM_016851123.2:224..742"
                     /db_xref="GeneID:107921248"
ORIGIN      
        1 medkigrlii liiccsilkg avsqvysvgd esgwssevdy gswsekynft vgdvleftyn
       61 kgqhnvfevt estyrtcdas sgvlakyesg ddkveltesk kywficnslk kvipnvalgt
      121 gmvivellmi viiisnasvv fshsvklpts gshcphqefe tdcplvspsq pp
//
LOCUS       XP_016706613             164 aa            linear   PLN 06-AUG-2024
DEFINITION  mavicyanin isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016706613
VERSION     XP_016706613.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851124.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="mavicyanin isoform X3"
                     /calculated_mol_wt=18010
     Region          25..122
                     /region_name="Phytocyanin"
                     /note="Phytocyanins are plant blue or type I copper
                     proteins; cd04216"
                     /db_xref="CDD:259878"
     CDS             1..164
                     /gene="LOC107921248"
                     /coded_by="XM_016851124.2:311..805"
                     /db_xref="GeneID:107921248"
ORIGIN      
        1 medkigrlii liiccsilkg avsqvysvgd esgwssevdy gswsekynft vgdvleftyn
       61 kgqhnvfevt estyrtcdas sgvlakyesg ddkveltesk kywficnvsg hciggmrfgv
      121 dvkagntsst nldptpsans gnafdtwslg lrifafqfll rlfc
//
LOCUS       XP_040943398             160 aa            linear   PLN 06-AUG-2024
DEFINITION  uclacyanin-3 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943398
VERSION     XP_040943398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087464.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="uclacyanin-3 isoform X4"
                     /calculated_mol_wt=17342
     Region          25..94
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     CDS             1..160
                     /gene="LOC107921248"
                     /coded_by="XM_041087464.1:271..753"
                     /db_xref="GeneID:107921248"
ORIGIN      
        1 medkigrlii liiccsilkg avsqvysvgd esgwssevdy gswsekynft vgdvlvtest
       61 yrtcdassgv lakyesgddk velteskkyw ficnqslkkv ipnvalgtgm vivellmivi
      121 iisnasvvfs hsvklptsgs hcphqefetd cplvspsqpp
//
LOCUS       XP_040943399             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uclacyanin-3 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943399
VERSION     XP_040943399.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087465.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="uclacyanin-3 isoform X5"
                     /calculated_mol_wt=17214
     Region          25..94
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     CDS             1..159
                     /gene="LOC107921248"
                     /coded_by="XM_041087465.1:280..759"
                     /db_xref="GeneID:107921248"
ORIGIN      
        1 medkigrlii liiccsilkg avsqvysvgd esgwssevdy gswsekynft vgdvlvtest
       61 yrtcdassgv lakyesgddk velteskkyw ficnslkkvi pnvalgtgmv ivellmivii
      121 isnasvvfsh svklptsgsh cphqefetdc plvspsqpp
//
LOCUS       XP_016707835             484 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 26S proteasome non-ATPase regulatory subunit 3 [Gossypium
            hirsutum].
ACCESSION   XP_016707835
VERSION     XP_016707835.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707835.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..484
                     /product="probable 26S proteasome non-ATPase regulatory
                     subunit 3"
                     /calculated_mol_wt=55049
     Region          310..414
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     Region          417..>461
                     /region_name="Rpn3_C"
                     /note="Proteasome regulatory subunit C-terminal;
                     pfam08375"
                     /db_xref="CDD:462452"
     CDS             1..484
                     /gene="LOC107922352"
                     /coded_by="XM_016852346.2:141..1595"
                     /db_xref="GeneID:107922352"
ORIGIN      
        1 mtqdvemkeq papsnsvpss spstlhhlke iaslietgay drearrilra irltmalrrk
       61 lkasvlssfl sfaltpgsea ftrlssylpk edenemevdt atstaqppak hslpeleiyc
      121 yllvliflid qkkydeakac ssasiarlkn lnrrtldvla arlylyyslc yeltgtlsei
      181 rsnllalhri atlrhdelgq etllnlllrn ylhynlydqa eklrskaprf eahsnqqfcr
      241 ylfylgkirt iqleytdake cllqaarkap vaalgfrvqc nkwaiivrll lgeipertvf
      301 mqkgmekalr pyfeltnavr igdlelfrsv aekfsttfss drthnlivrl rhnvirtglr
      361 nisisysria ladvakklrl dsvadaesiv akairdgaid atldhsngcm lsketgdiys
      421 ttepqtafns riafclnmhn davralrfpp nshkekesae krrerqqqeq elakhiaeed
      481 ddef
//
LOCUS       XP_016706723             406 aa            linear   PLN 06-AUG-2024
DEFINITION  monooxygenase 2 [Gossypium hirsutum].
ACCESSION   XP_016706723
VERSION     XP_016706723.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851234.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706723.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..406
                     /product="monooxygenase 2"
                     /calculated_mol_wt=45028
     Region          6..400
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     CDS             1..406
                     /gene="LOC107921367"
                     /coded_by="XM_016851234.2:103..1323"
                     /db_xref="GeneID:107921367"
ORIGIN      
        1 meivedvviv gagiagltts lglhrlgirs lvlessdelr itgfafttws nawkaldavg
       61 igeslrhqhy ltpsilvast fldqpaseis ykgheirclq rrllletlak elpsdtirfs
      121 skvvsieesg ffkrlhlsdg tilktkvlig cdgvnsvvak wlgfdkpvft grsairgsan
      181 fkgghgfglk frqflgkglr sgflpcnden vywfltwips tkyeeleddp vklkqfvmsk
      241 ledipnemks vvgkteldai assplryrrp wellwgnisk gnvcvagdal hpmtpdlgqg
      301 gcaaledgvv larciaeall kpggeenngk ivdeeeeykr iemglknyaq errwrsidlv
      361 stasmvgyiq qnsgkimnfl rdkflsrflp gmllrkasfd cgtlry
//
LOCUS       XP_016707850             392 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 46 [Gossypium hirsutum].
ACCESSION   XP_016707850
VERSION     XP_016707850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..392
                     /product="probable protein phosphatase 2C 46"
                     /calculated_mol_wt=43382
     Region          48..355
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(56,60..61,86..88,287,346)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..392
                     /gene="LOC107922364"
                     /coded_by="XM_016852361.2:701..1879"
                     /db_xref="GeneID:107922364"
ORIGIN      
        1 mlsgfmnflr acfrprsdry vhsssdaggc qdgllwykdt gqhfngefsm avvqannlle
       61 dqsqlesggl sshecgpygt fvgvydghgg petsryindh lfqhlkrfts eqqtmsvdvi
      121 rkayqateeg flslvtrqwp mnpqiaavgs cclvgvicgg tlyvanlgds ravlgravka
      181 tgevlaiqls aehnaciesv rqelqslhpd dsqivvlkhn vwrvkgliqi sksigdvylk
      241 kaefnreply pkfrlrepfk kpilsadpsi tvhqlqphdq fvifasdglw ehlsnqeavd
      301 ivqnhsrsgi arrlvktalq eaakkremry sdlkkidrgv rrhfhdditv ivvflnsnlv
      361 skassvkgpn lsvrgggvtl pprtlapcam pv
//
LOCUS       XP_016707851             392 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 46 [Gossypium hirsutum].
ACCESSION   XP_016707851
VERSION     XP_016707851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852362.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..392
                     /product="probable protein phosphatase 2C 46"
                     /calculated_mol_wt=43382
     Region          48..355
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(56,60..61,86..88,287,346)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..392
                     /gene="LOC107922364"
                     /coded_by="XM_016852362.2:256..1434"
                     /db_xref="GeneID:107922364"
ORIGIN      
        1 mlsgfmnflr acfrprsdry vhsssdaggc qdgllwykdt gqhfngefsm avvqannlle
       61 dqsqlesggl sshecgpygt fvgvydghgg petsryindh lfqhlkrfts eqqtmsvdvi
      121 rkayqateeg flslvtrqwp mnpqiaavgs cclvgvicgg tlyvanlgds ravlgravka
      181 tgevlaiqls aehnaciesv rqelqslhpd dsqivvlkhn vwrvkgliqi sksigdvylk
      241 kaefnreply pkfrlrepfk kpilsadpsi tvhqlqphdq fvifasdglw ehlsnqeavd
      301 ivqnhsrsgi arrlvktalq eaakkremry sdlkkidrgv rrhfhdditv ivvflnsnlv
      361 skassvkgpn lsvrgggvtl pprtlapcam pv
//
LOCUS       XP_016706500             831 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 [Gossypium
            hirsutum].
ACCESSION   XP_016706500
VERSION     XP_016706500.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851011.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706500.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..831
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1"
                     /calculated_mol_wt=95706
     Region          89..148
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          364..685
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..831
                     /gene="LOC107921142"
                     /coded_by="XM_016851011.2:85..2580"
                     /db_xref="GeneID:107921142"
ORIGIN      
        1 mvlklliklh fpsfalsqtl vkfssfflpf vatpplpsfk krtlrflqki illypipiys
       61 kvssfyaycn qknkkerkkt lsrlyqremg cvaskleeee evvsicrerk rltklavdrr
      121 yalaeahfry cqalyavsaa iklfvarhss ppspflitfp ppcpptppat dqnvitnpml
      181 lqqrpsesth eaiacescgs stssdisdee tepevvreeq qqqqkqqhqh qhqhqhqhqh
      241 qppppcgyfy mqmpppmpsp qrdfgwdffn pfdvvrpeii sgynrcsddd lravreqegi
      301 peleeegdtk eeekkvvlve ekdtkreqee sesgllkvke ethvsqgeqk gltvidspek
      361 grellealkd iedyfirayd sgkdvsrmle anmvhlqsgl egikenstkl iqaitwhrst
      421 lskpqscksl vasssksssa wteykndlfd qyggmdsgsh sltlerlyaw ekklyeevka
      481 gdstrkiyer kcsrlrnqdv kgydeltmdk traavkdlya riliairsak siskriqnlr
      541 deellpqiie llkgltrtwk vmleshetqn kilsevktfa cpsygkfcnd shrlatlqle
      601 aelqnwhacf teyvaaqray iqalhgwltk flvpevefys rgrssgapyg angppllvic
      661 ynwltsmdel pdkavtfslk sfskdvkalw aqqgeeqqqk rkvdgmakel drrtmafqka
      721 etrflesklt eyksemeteq qneyltekkd qlemmrkrld verekhhnhm qetqritlng
      781 lqtgfstvfe sliefskasm kiyndivtls ekmgnvsyie gssqveenss r
//
LOCUS       XP_016737337             288 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016737337
VERSION     XP_016737337.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016881848.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016737337.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="protein CHAPERONE-LIKE PROTEIN OF POR1,
                     chloroplastic"
                     /calculated_mol_wt=30706
     Region          83..287
                     /region_name="CPP1-like"
                     /note="Protein CHAPERONE-LIKE PROTEIN OF POR1-like;
                     pfam11833"
                     /db_xref="CDD:432112"
     CDS             1..288
                     /gene="LOC107947256"
                     /coded_by="XM_016881848.2:68..934"
                     /db_xref="GeneID:107947256"
ORIGIN      
        1 maahtlsvrp drltpgspip rppvrlpnqt hpslkpakte pwraaailht rrplaarags
       61 raddsapfem svenalnllg vsesasfddi lraknsivas ikdnqeaiaq veaaydmllm
      121 rsltqrragk vvdrsirfad vkpvnplgvr smpqwvqttt kslpvsvetp stgdlglqag
      181 vygalmvlty vnetstssai pyagpdvvgl ilassfgasl yfmtrrnlkl gkatlitigg
      241 lvagavvgsa venwlqvdiv pflgihspat vvgeiilfsq flvslylr
//
LOCUS       XP_016706624             312 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hexosyltransferase MUCI70 [Gossypium hirsutum].
ACCESSION   XP_016706624
VERSION     XP_016706624.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851135.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706624.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..312
                     /product="probable hexosyltransferase MUCI70"
                     /calculated_mol_wt=36719
     Region          5..256
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..312
                     /gene="LOC107921258"
                     /coded_by="XM_016851135.2:65..1003"
                     /db_xref="GeneID:107921258"
ORIGIN      
        1 mnlvdieyvk kcrfvvasgt fdgydvphqp snisirskkl fcflmvvdev slkfikknvt
       61 vrkdrdermw vgiwrliplk hlpydeprrk gkvpkilthr lfpeaqysiw idgkmelivd
      121 pllilerylw hdkltyaiaq hkhhrsiyee adankrrkry akllidllmn iyyyegmepw
      181 slkknaisdv pegaiiireh talsnlfncl wfnevnlftp rdqlsfgyiv yrlrglfkff
      241 mfqnceynsl fvlhlhtreh sskvewiksl sefkgngssm kesrggfglw ipypknldsv
      301 ilppvvrtsk ag
//
LOCUS       XP_016707928             529 aa            linear   PLN 06-AUG-2024
DEFINITION  solute carrier family 40 member 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707928
VERSION     XP_016707928.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852439.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707928.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="solute carrier family 40 member 2 isoform X1"
                     /calculated_mol_wt=58643
     Region          60..494
                     /region_name="FPN1"
                     /note="Ferroportin1 (FPN1); pfam06963"
                     /db_xref="CDD:462052"
     CDS             1..529
                     /gene="LOC107922410"
                     /coded_by="XM_016852439.2:179..1768"
                     /db_xref="GeneID:107922410"
ORIGIN      
        1 mcsslmvckf wpwfhssaqq kpkrtilslc vsalnilcnn ydtnssilnf fssiqkkkfn
       61 grmwefsvgl ymisvwpdsl llvaiygave ssstalfgpi lgrwvdrlty vkvlqlwlvt
      121 qnlsfiiagg avvallvfps lkftnivafi alviltnisg avgvlstlag tilierewlv
      181 viseghppnl ltdmnsvirr idltcklvap visgfiisfv slkasalmla lwttisvwve
      241 ywlfmsvyng ipalginssr rrilqvspsn hvedtistsq ernslvsndg ensatagksf
      301 afkiiewisk vpyieawkvy lqqdvvlpgv alallfftvl sfgtlmtaal ewqgipafvi
      361 giargisasi giaativypm lqshistlrt glwsvwsqwi cllvsvasiw vknshisaym
      421 lmagvatsrl glwmfdlsii qqmqdaapes drcivggvqn slqatfdlva yvmgivisnp
      481 qhfwklnlvs fwavtmaafl ytwhlyrirk hlfhfeklss llissaqpl
//
LOCUS       XP_040943400             504 aa            linear   PLN 06-AUG-2024
DEFINITION  solute carrier family 40 member 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943400
VERSION     XP_040943400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087466.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..504
                     /product="solute carrier family 40 member 2 isoform X2"
                     /calculated_mol_wt=55856
     Region          21..469
                     /region_name="FPN1"
                     /note="Ferroportin1 (FPN1); pfam06963"
                     /db_xref="CDD:462052"
     CDS             1..504
                     /gene="LOC107922410"
                     /coded_by="XM_041087466.1:164..1678"
                     /db_xref="GeneID:107922410"
ORIGIN      
        1 mnttesllpe dqrqepppsf llnylyiahf larwgarmwe fsvglymisv wpdslllvai
       61 ygavesssta lfgpilgrwv drltyvkvlq lwlvtqnlsf iiaggavval lvfpslkftn
      121 ivafialvil tnisgavgvl stlagtilie rewlvviseg hppnlltdmn svirridltc
      181 klvapvisgf iisfvslkas almlalwtti svwveywlfm svyngipalg inssrrrilq
      241 vspsnhvedt istsqernsl vsndgensat agksfafkii ewiskvpyie awkvylqqdv
      301 vlpgvalall fftvlsfgtl mtaalewqgi pafvigiarg isasigiaat ivypmlqshi
      361 stlrtglwsv wsqwicllvs vasiwvknsh isaymlmagv atsrlglwmf dlsiiqqmqd
      421 aapesdrciv ggvqnslqat fdlvayvmgi visnpqhfwk lnlvsfwavt maaflytwhl
      481 yrirkhlfhf eklsslliss aqpl
//
LOCUS       XP_016707930             289 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ homolog subfamily C member 17 [Gossypium hirsutum].
ACCESSION   XP_016707930
VERSION     XP_016707930.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852441.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707930.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..289
                     /product="dnaJ homolog subfamily C member 17"
                     /calculated_mol_wt=32046
     Region          4..71
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(37..39,48,51..52,55..56)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          170..242
                     /region_name="RRM_DNAJC17"
                     /note="RNA recognition motif (RRM) found in the DnaJ
                     homolog subfamily C member 17; cd12429"
                     /db_xref="CDD:409863"
     CDS             1..289
                     /gene="LOC107922411"
                     /coded_by="XM_016852441.2:292..1161"
                     /db_xref="GeneID:107922411"
ORIGIN      
        1 mdvdhynvlg lpsgqeganl tqkeitkayr ekardlhpdk rkddpnahen fiklkssyei
       61 lvdekarklf ddllqvkreq krrfaqqdsk rrkmmsdled rerasfapdp amkakeeeer
      121 iarklkeeia riramqankg asmgtgsgqe kvgregnsgv gghvgvdker vlkvswekig
      181 egytaeklre lfsrfgeved ivvnsskkkg salvvmatkh avdaatgsvs gnldnpllvv
      241 plkpsvaefp aakkeeqsdr lsnlvgagyq afedavlnkl tkaaenqqk
//
LOCUS       XP_016707641             893 aa            linear   PLN 06-AUG-2024
DEFINITION  transportin-1 [Gossypium hirsutum].
ACCESSION   XP_016707641
VERSION     XP_016707641.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852152.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707641.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..893
                     /product="transportin-1"
                     /calculated_mol_wt=99100
     Region          68..>503
                     /region_name="KAP95"
                     /note="Karyopherin (importin) beta [Intracellular
                     trafficking and secretion]; COG5215"
                     /db_xref="CDD:227540"
     Region          101..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,151..152,155,158..159,162,200,
                     201..202,205,241..242,245,248..249,282..283,286,289..290)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          134..162
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          215..249
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          262..290
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          391..426
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..461
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          522..548
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          681..737
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     CDS             1..893
                     /gene="LOC107922235"
                     /coded_by="XM_016852152.2:262..2943"
                     /db_xref="GeneID:107922235"
ORIGIN      
        1 maaagsaswq pqeeglkeic glleqqisps ssadksqiwq qlqhysqfpd fnnylafila
       61 raegksveir qaaglllknn lrtaykmmsp ahqqyiksel lpclgaadkh irstvgtiis
      121 vvvqqggilg wpellqafin cldsndlnhm egamdalski cedipqvlds dvpglaerpi
      181 niflpqlfqf fqsphaslrk lslgsvnqyi mlmpsalyas vdkylhglfg landpaaevr
      241 klvcaafvql ievrpsvlep hmknvieyml qvnkdtddev aleacefwsa ycdaqlppei
      301 lreylprlip illsnmayad ddeslaeaee deslpdrdqd lkprfhtsrf hgsedaeddd
      361 ddsfnvwnlr kcsaaaldvl snvfgdeilp tlmpiiqakl aatgdeawkd reaavlalga
      421 vgegcingly phlseivafl ipllddkfpl irsiscwtls rfskyivqds ghqkgyeqfd
      481 aalmgllrri ldtnkrvqea acsafatlee eaaeelaprl evilhhlmca fakyqrrnlr
      541 ivydaigtla davggelnqp vyleilmppl iakwhqfpns dkdlfpllec ftsiaqalgt
      601 gftqfaqpvf qrciniiqtq qlakvdpvsa gvqydkefiv csldllsglt eglgsgiesl
      661 vsqsnlrdll lqccmddasd vrqsafallg dlarvcpvhl hprlsefldi aakqlntpkl
      721 ketisvanna cwaigelaik vrkeispivm tvisclvpil qhaeglnksl vensaitlgr
      781 lawvcpdlvs phmehfmqsw cialsmirdd iekedafrgl camvranpsg alsslvfmck
      841 aiaswheirs eelhnevcqv lhgykqmlrn gawdqcmsal eppvkdklsk yqv
//
LOCUS       XP_016706583             803 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g35130,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706583
VERSION     XP_016706583.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851094.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706583.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..803
                     /product="pentatricopeptide repeat-containing protein
                     At4g35130, chloroplastic"
                     /calculated_mol_wt=90001
     Region          65..801
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          91..118
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          124..153
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          159..185
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          190..219
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          225..289
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          291..319
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          366..391
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          393..422
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          468..493
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          497..524
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          530..559
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          566..592
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          598..627
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..803
                     /gene="LOC107921211"
                     /coded_by="XM_016851094.2:157..2568"
                     /db_xref="GeneID:107921211"
ORIGIN      
        1 maatlllhyf naprivslnh feppktnpfa vtrprfskpn qlqtthskas nilaepthft
       61 lidalcsfid sgsienalyl feemnhsdtf twniiikgla hkglfkeavs yfrrmefega
      121 rpdkftypfv lkacagllsl kegekvhakl ikvgldldvy vcnslismym kvgcvelgen
      181 vfkempvrdl vswnsiisgy qfvgdglssl vclremvlig irpdkfsfis glgacsiegc
      241 qrngkeihcq vikngfemdf mvetslidmy gkcgnavyae rvfemivnkn tvawnamvag
      301 yvsnacfses fscvkkmqev gklrpdgitm inllpacaqm gallmgksih asairkgflp
      361 hivletalvd fygrcgtlkl akhvftrine knlaswnami aayvqngqys ealdmfqdiw
      421 yksvkpdait fasilpayae ltslsegrqi havitklglt ssntiisnti iylyakcgdl
      481 qtarrcfdgm frkdvvswnt iimayaihgf grisiqlfhe miehgikpnk stfvsllssc
      541 sisgmvdegw eyfnsmkrdy gidpgiehfg cmldligrtg nldlakrfie emplvptari
      601 wgsllaasrk andielaeva akhalslehd ntgcyillsn myaeagrwed vekiktlmiq
      661 eglaktmgcs tvetdykihr fvdqdrsnaq msmvndvmdi iskmtadked ayahritklk
      721 rtdltrkrpn lpenhsvrwa isfglistel gspvlvrkni ricedchnva kkiskitkre
      781 iivgdskvfh hfqdgncfcg dyw
//
LOCUS       XP_016707557             443 aa            linear   PLN 06-AUG-2024
DEFINITION  hippocampus abundant transcript-like protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016707557
VERSION     XP_016707557.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707557.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..443
                     /product="hippocampus abundant transcript-like protein 1"
                     /calculated_mol_wt=47410
     Region          11..427
                     /region_name="MFS_SLC46_TetA_like"
                     /note="Eukaryotic Solute carrier 46 (SLC46) family,
                     Bacterial Tetracycline resistance proteins, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; cd17330"
                     /db_xref="CDD:340888"
     Site            order(18..19,22..23,26,66,119..120,122..123,126,129,148,
                     151..152,155,254,257..258,261..263,266,294,298,347..348,
                     352,356,372,375..376,379..380,383)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340888"
     CDS             1..443
                     /gene="LOC107922177"
                     /coded_by="XM_016852068.2:191..1522"
                     /db_xref="GeneID:107922177"
ORIGIN      
        1 mekkltalsh lfvtvflsgf stiivapaii dvtmfslcpg tdecslaiyl sgfqqaiigl
       61 gtalmmpiig nlsdqygrka lltlpmtlsi iplailacnr ttnyfyayfa fktltdmvcq
      121 gsinclalay ladnisyrqr asafgilagv tsaayvcgtl aarflstgla fqvatfvslf
      181 avvymrifle esipadqgeg itqpilkege edniiqnddn aptkvppfkk ipslgdviyl
      241 mknspsfaqa aivaffnnlg eggmesssmy ylkarfhfnk nqfadlmlig givatisqlf
      301 impllvspig dgrllsiglf ascvyailys iawsawvpya aaavstvmvf appslrsias
      361 kqagpreqgk aqgcisgiis lanimaplif spltslflse gapfhfpgfs iiciaitlmi
      421 afiqslmigr apstsnaens tev
//
LOCUS       XP_016706765             868 aa            linear   PLN 06-AUG-2024
DEFINITION  mechanosensitive ion channel protein 8 [Gossypium hirsutum].
ACCESSION   XP_016706765
VERSION     XP_016706765.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851276.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706765.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..868
                     /product="mechanosensitive ion channel protein 8"
                     /calculated_mol_wt=100332
     Region          <655..835
                     /region_name="MscS"
                     /note="Small-conductance mechanosensitive channel [Cell
                     wall/membrane/envelope biogenesis]; COG0668"
                     /db_xref="CDD:440432"
     CDS             1..868
                     /gene="LOC107921425"
                     /coded_by="XM_016851276.2:251..2857"
                     /db_xref="GeneID:107921425"
ORIGIN      
        1 mskwklkifa sannnnlndd neelpilydf dcheeeliis amdgdtrksp vnpvetaesr
       61 tgkdsnletd sfrhsnyefw sdreeikdgg ednfdykqrw qpgeessswk imndhflkkt
      121 sntneialem gldvddikrd psvmsrdsrr vsfeaavpsf qyqsqhqegi ndrayelsrg
      181 msnasalsgl lskvsctksr lidrppeevq mmsdllsksg pimsgllgkg segeeeddpf
      241 adedvpdefr ranlnaltll qwlslvliva alvcslwips lktmdlwelr lwkwlvfllv
      301 licgrlvsgw girlivffie mnfflrkrml yfvygvrkpv qnclwltlvl ltwhflfdnk
      361 verendfliy vtkilvcflv stclwllktl lvkvmaslfh vstyfdrilh tlfnqyviel
      421 lsgppiienq rmeeereria aeisrlqtag akvpsdlhed afptqrtsek lrktftrlkt
      481 fssapspkkg gngialehlh klnhrnisaw nmkrlmkmvr ygtlttldeq imqddsvkqi
      541 rseheatlaa kkifqnvahr gskfiyvedl mrfmredeaf rtmatfegay emrriskssl
      601 knwmlnayre rkalaltlnd tktavkqlhh mvnvitiiii vviwlvilei assrvivlfs
      661 sqlvvaafif gntcktifes ivflfiihpf dvgdrceing vqlvveemni lttvflrfdn
      721 lklvfpnsvl stmpignfyr spdmgdaidf lihsgtpvek ialmkqrivs yivnrkehwc
      781 sdpmivlkef eqfnqikmav wvthkmnyqd igerwerrsr laeeivnilk eldlqyrllp
      841 idinvctlps vhstrfpstw ntaetste
//
LOCUS       XP_016708002             575 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 [Gossypium hirsutum].
ACCESSION   XP_016708002
VERSION     XP_016708002.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852513.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708002.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..575
                     /product="serine/threonine-protein kinase STY46"
                     /calculated_mol_wt=64995
     Region          179..246
                     /region_name="ACT_TyrKc"
                     /note="Uncharacterized, N-terminal ACT domain of an
                     Arabidopsis/Oryza predicted tyrosine kinase and other
                     related ACT domains; cd04928"
                     /db_xref="CDD:153200"
     Region          300..543
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(300..304,308,319,321,352,368..371,375,377,415,417,
                     419..420,422,433,436,451..454)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(300..304,308,319,321,352,368..371,375,415,417,
                     419..420,422,433)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(304,375,377,415,417,419,436,451..454)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(432..440,450..454)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..575
                     /gene="LOC107922464"
                     /coded_by="XM_016852513.2:614..2341"
                     /db_xref="GeneID:107922464"
ORIGIN      
        1 mvmddnescv skandfsplq crqqrqklqv ynevlrrlrd sdieeanrpg fddelwahfn
       61 rlpsryaldv nveraedvlm hqrllhlahd panrpamevr lvqvqsisdg slvdpalsnp
      121 scgdsaqsdp khvirqsihp ppafgsspnl ealaleadks edqdgdssvh anshfsrpmh
      181 eitfstedkp kllsqltall aeiglniqea hafstvdgys ldvfvvdgwp yeeteqlkvv
      241 lekevlkvek qswlkqhsfs pkrdyekmet nayqnyvaip ndgtdvweid prnlkfgnkv
      301 asgsygdlyk gtycsqevai kvlkperlnt dlqkefaqev fimrkvrhkn vvqflgactq
      361 ppnlciitef msggsvydyl hkqkgvfrlp sllkvaidvs kgmnylhqnn iihrdlkaan
      421 llmdenevvk vadfgvarvk sqsgvmtaet gtyrwmapev iehkpydhka dvfsfgivlw
      481 elltgklpye yltplqaavg vvqknlrpti pkhtnpklae llercwqqdp alrpdfseii
      541 eilqqiakev gddgedrrkd kssggflsal rrghh
//
LOCUS       XP_016707903             339 aa            linear   PLN 06-AUG-2024
DEFINITION  heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016707903
VERSION     XP_016707903.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852414.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..339
                     /product="heterodimeric geranylgeranyl pyrophosphate
                     synthase small subunit, chloroplastic"
                     /calculated_mol_wt=37290
     Region          43..330
                     /region_name="IspA"
                     /note="Geranylgeranyl pyrophosphate synthase [Coenzyme
                     transport and metabolism]; COG0142"
                     /db_xref="CDD:439912"
     CDS             1..339
                     /gene="LOC107922395"
                     /coded_by="XM_016852414.2:297..1316"
                     /db_xref="GeneID:107922395"
ORIGIN      
        1 mvfstvltsv pnlyltrkpk nihiqircls spsvsissqs nltqfdlkay watlyaeitq
       61 kleeaipvky pdqiyeamry svlakgakra ppvmcvaaye ifgdnrlaaf ptacalemvh
      121 aaslihddlp cmddalerrg qpsnhkvfgd dmailagdal fplgfhhivm htppelvpes
      181 rllrviaeia rtvgssgmaa gqfldlkggn tvdfiqekky gamgecsavc ggllagakdd
      241 eierlrrygr avgvlyevvn dvllskstek egtegqekkg kgyvrlygie ksmeimeelr
      301 skakneldgf ekygdcvapl ysfidyainr gfnvsdlsq
//
LOCUS       XP_016707565            1616 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional elongation regulator MINIYO [Gossypium hirsutum].
ACCESSION   XP_016707565
VERSION     XP_016707565.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852076.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707565.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1616
                     /product="transcriptional elongation regulator MINIYO"
                     /calculated_mol_wt=180755
     Region          293..337
                     /region_name="RPAP1_N"
                     /note="RPAP1-like, N-terminal; pfam08621"
                     /db_xref="CDD:462539"
     Region          416..489
                     /region_name="RPAP1_C"
                     /note="RPAP1-like, C-terminal; pfam08620"
                     /db_xref="CDD:462538"
     CDS             1..1616
                     /gene="LOC107922182"
                     /coded_by="XM_016852076.2:397..5247"
                     /db_xref="GeneID:107922182"
ORIGIN      
        1 mekkqeqrsg hktkrnegkv aslkvfgsss ingddasslv gsiiekgivs nndiskpiqp
       61 prlsvlpfpv arhrshgphw tprsdnrnvv eeddedetgf anfdpisvfa epirrkekkn
      121 ldlshwkeam qgddlsqrkg retnqsdvgk terqmmdgka mkdlgnksml insfgahadv
      181 asmdveshln ahrplakaee amrselsdss vtgmdlddsl qlqkeehvkd hdseifskes
      241 gtmavdgqvm akrmchndst nvefrrmeki dtlvpeqfrn lgnergsmsl esgidaenra
      301 rlenmspeei keaqaeimlk ldpallnllk krgqeklkkq idthsnqaae sqlgirrenq
      361 snnamkapnl dsnnptvtts snitksgldn gvkqnvdsas gslwdawsqr veavrelrfs
      421 ldgtvvendf vqipeirgdn vaerdflrte gdpgasgyti keavaltrst ipgqralalh
      481 llasvldkal rniylnpigs tladkdnvds tvdweavwaf algpepelil slrmslddnh
      541 nsvvlatakv iqcvlscdin qsffdllekt aidmrgtyta pifrskpeid vgflhggfwk
      601 ysakpsnvll ygdnivedet egkhtiqddi vvagqdfaag lvrmgilpri rylleiepta
      661 pleeclisvl vaiarhspmg vnaimkcqrl vqtvvhrfta nsnmdvylsk iksvcllkvl
      721 sqsdrkncae fvengifqam twqlyknays leqwlklgre ncklssalmv eqlrfwkvci
      781 qygycvsyfs nilpalylwl npptirklve nnvlgefasi sveayliles lartlpnfys
      841 hkilsdgiae gaddnvetws wsharpmvdl alkwisfksr lidsqdeiig isifhdksss
      901 pllwvysavm hmlsrvlekv ipedamglqd dghvpwlpdf vpkvgleiir ngflsftrvn
      961 taeyganlaa gsffieqlcs lrkqsafets faslcclhgf fqvfiyinnl iqlaktvvcn
     1021 psqacslsqe enilskgilv eslfelrcvf difsklvase whlvqsveif grggpapgvg
     1081 lgwgasgggf wsksvllaqt dawllsqlld ifqtvsievl slddertftr eiifsalglc
     1141 lisgprdkvi vekaldvmlq vpvlkyldlc iqhfiqgngr iklygweyke ddymlfseil
     1201 ashfrnrwls nknklkassv drtsrsnasl etipedldts mmsrdhncts lmmewahqrl
     1261 pfpvhwflsp istlcdskha glgrvsdiqn ivqdpgdive vskagmffll glealssfls
     1321 advvspirsv pviwklhsls iilligmsvl edektrdvye slqelyghll deirskgrsq
     1381 tisnmstslt petenkinve flrfqseihe systfidtlv eqyaavsfgd ltygrqvaiy
     1441 lhrcveasvr laawnalsns hvlellpplq kclaeaegyl epveeneail eayvkswvsg
     1501 aldkaatrgs vaftlvlhhl stfvfishks dkpllrnklv ksllrdyark kqhegmmlqf
     1561 ieytkpssvt kaekeegltm dssnvegrle rlkeacegnp slltlvdklk ssclkq
//
LOCUS       XP_016706422             464 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKIP23 [Gossypium hirsutum].
ACCESSION   XP_016706422
VERSION     XP_016706422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850933.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..464
                     /product="F-box protein SKIP23"
                     /calculated_mol_wt=52623
     Region          1..311
                     /region_name="PLN03215"
                     /note="ascorbic acid mannose pathway regulator 1;
                     Provisional"
                     /db_xref="CDD:178754"
     CDS             1..464
                     /gene="LOC107921077"
                     /coded_by="XM_016850933.2:1019..2413"
                     /db_xref="GeneID:107921077"
ORIGIN      
        1 madwsqlpqe llvliaerle arfdvvrfrs vccswrssvp pklypfrpty lrtqgriees
       61 lshitrytfy llrssrgdet eapacwlvki gegsrgfkmq llnpfsdskl eslprnfpkv
      121 ldltnfqvie lgqqyiglyd vyidhplepl cydyrkkvvl qqsstncddf iifasfrypa
      181 flrsgekewt vleimydied iisfnekfya idlngktrvi dqslnvsflp hvgspgsrkf
      241 lvkshdnlla vemlsnpdkg vgfrvfrmse edhkwdemes lrdrilfldf ygavsapase
      301 lywskgnlif ypgglfgsph dpdpgfrlvf vfdletgtac plencpaycn lfwpppqwvt
      361 ssesvislte visnsthsis satpenecmn pesdftislt evisnsthsi ssatpenecm
      421 ypesgfalsp tpitpkrvty lagkevgseq pspsskcsfk fccf
//
LOCUS       XP_016707831             561 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: rop guanine nucleotide exchange factor 1
            [Gossypium hirsutum].
ACCESSION   XP_016707831
VERSION     XP_016707831.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852342.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707831.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..561
                     /product="LOW QUALITY PROTEIN: rop guanine nucleotide
                     exchange factor 1"
                     /calculated_mol_wt=62402
     Region          94..455
                     /region_name="PRONE"
                     /note="PRONE (Plant-specific Rop nucleotide exchanger);
                     pfam03759"
                     /db_xref="CDD:427490"
     CDS             1..561
                     /gene="LOC107922346"
                     /coded_by="XM_016852342.2:319..2004"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107922346"
ORIGIN      
        1 mgsvssddgf deqsercgsy slsadvsese scssfshrrf dgegcsssmt sssprlpaag
       61 rfgfqvplml pviggkdvvi wddekpekrn tnlseiemmk erfaklllge dmsgggqgvc
      121 salaisnait nlsatvfgql wrleplapqk kaiwrremdw llcvsdsivd lvpsiqqfpg
      181 grtyevmvtr prldlyvnlp alkkldamli tildgfcete fwyadrgxvv dddgdceace
      241 ekwwlpcpkv ppnglsedar kklqqcrdct nqvlkaamai nsnvlaemei ptaylenlpk
      301 ngkaclgdii yryitadqfs peclldcldl stehhtlevt nrieaavhvc klkdqrkrin
      361 dikvkrsswg gkvkglvsis eknnflaqra etllnclrrr fpglpqtsld mskiqynkdv
      421 gqsilesysr vmeslafnim aridgvlyvn dvikrcaeae tvslfnrrgl gglpiqkrms
      481 pspfsiqhtp yaspfatptf csstpltgsp gwapsslkrn ilkeesdwkf ekpcaaefer
      541 vcsytrslsa rrvsenaher d
//
LOCUS       XP_016707448             545 aa            linear   PLN 06-AUG-2024
DEFINITION  L-ascorbate oxidase homolog [Gossypium hirsutum].
ACCESSION   XP_016707448
VERSION     XP_016707448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851959.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="L-ascorbate oxidase homolog"
                     /calculated_mol_wt=61047
     Region          3..545
                     /region_name="PLN02991"
                     /note="oxidoreductase"
                     /db_xref="CDD:215536"
     CDS             1..545
                     /gene="LOC107922114"
                     /coded_by="XM_016851959.2:321..1958"
                     /db_xref="GeneID:107922114"
ORIGIN      
        1 mvlkgsslrq tlavvlvlsv falvqaedpy rffnwnvtyg diyplgvrqq gilingqfpg
       61 pdlysvtndn liinvynnld epfllswngm qqrrnsyedg vygttcpipp gknftyilqa
      121 kdqigtfyyf pslafhkaag gfggirilsr pripvpfpdp agdftvligd wfktdhkklq
      181 akldrghklp fpagilingh gpngafftve qgktyrfris nvglqnslnf riqghkmklv
      241 evegthtvqt myesldvhvg qsysvlvtmd qsaqdfyiva strftdkilt ttatlhysns
      301 nkalsgpipg gptdqinwsl nqarsirtnl tasgprpnpq gsyhyglini trtiklvssa
      361 dqvkgkqrya vnsvsfipad tplkladyfk iggvfrvgsi sdkptgqnmy ldtsvmgadf
      421 rafveivfen hesivqswhi dgyafwvvgm dgglwtpdsr keynlrdavs rsttqvyprs
      481 wtaiymaldn vgmwnvrtef warqylgqqf ylrvyspvns prdeypipkn allcgraqgk
      541 strpl
//
LOCUS       XP_016707449             363 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g55050 [Gossypium hirsutum].
ACCESSION   XP_016707449
VERSION     XP_016707449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..363
                     /product="GDSL esterase/lipase At5g55050"
                     /calculated_mol_wt=39455
     Region          34..348
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(42,123,182,328,331)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(42,328,331)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(42,123,182)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..363
                     /gene="LOC107922115"
                     /coded_by="XM_016851960.2:130..1221"
                     /db_xref="GeneID:107922115"
ORIGIN      
        1 mgkflpwism akglafvals liigvlqsan aevpaifilg dstvdvgtnn ylpdsniman
       61 fphngvdfpf qratgrfsng lntadflakf fgfkrspvsf lslngtlaik krrfrgvnfa
      121 sagsglldit gqtstqkanv vpmgeqvyqf smvyndlvas kgtseaqnfl skslifisvg
      181 sndivgnhys knpipkeqfi pnlavvyekh lrnlinvgar kfgiisvppv gccpsqrvsa
      241 ngeclkelnd qaeaffstmd tlmrnlsyen kdikyslgnt fnitkpvidn pqnssftdvk
      301 naccgngtlh ctplaslcsn rhkylfwdlf hptqaasrla asilfvgdsr fatpvnfsql
      361 aea
//
LOCUS       XP_016707450             229 aa            linear   PLN 06-AUG-2024
DEFINITION  coiled-coil domain-containing protein 124 [Gossypium hirsutum].
ACCESSION   XP_016707450
VERSION     XP_016707450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851961.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="coiled-coil domain-containing protein 124"
                     /calculated_mol_wt=26405
     Region          <4..>135
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          145..226
                     /region_name="Ccdc124"
                     /note="Coiled-coil domain-containing protein 124 /Oxs1;
                     pfam06244"
                     /db_xref="CDD:461858"
     CDS             1..229
                     /gene="LOC107922116"
                     /coded_by="XM_016851961.2:137..826"
                     /db_xref="GeneID:107922116"
ORIGIN      
        1 mpkkmgvnsk aeaararksa teaerkdrea rekeeqywre aegpkskatk kreeeaekra
       61 eaaarkaear rqaemeekei ekalkkpdkk anrvaipvpk vteaelqkrk eeeqaemakk
      121 aeeakkrqsr taaeeeyerm vlvtnmnrdd sliearsvee aiaqmsvadt lppdrhperr
      181 lkasfkafee aelprlkeek pglthnqykd miwklwkksp dnplnqvae
//
LOCUS       XP_016708220             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708220
VERSION     XP_016708220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..305
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34413
     CDS             1..305
                     /gene="LOC107922620"
                     /coded_by="XM_016852731.2:220..1137"
                     /db_xref="GeneID:107922620"
ORIGIN      
        1 mhaktdsegt sidaswpprs prrpvyyvqs psnhdvekms ygssptaspt hhyyhcspih
       61 hsresstsrf saslknprsl sawkhvqlgr gddddddddd emdvrdgska nkirlylclv
      121 flffvlftvf slilwgasrs ykpkilvkhi vfenfhyqag ndqsglptdm fslnstvkis
      181 yrnpatffav hvtstpwelh yfqlkiasgq mkkftqsrks qrkvvtivkg sqvplyggip
      241 vlvasrehln tiavplnltf vmrsrayilg rlvktkcygr ircsvtlrgn klgtalnltd
      301 sciyq
//
LOCUS       XP_016706260             493 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine histidine transporter-like 7 [Gossypium hirsutum].
ACCESSION   XP_016706260
VERSION     XP_016706260.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850771.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="lysine histidine transporter-like 7"
                     /calculated_mol_wt=53768
     Region          65..481
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..493
                     /gene="LOC107920938"
                     /coded_by="XM_016850771.2:203..1684"
                     /db_xref="GeneID:107920938"
ORIGIN      
        1 mgevvvpied kskhvlplyl pptpvpfqii tikdtpgaaa gvspppqgvv nlseleswlp
       61 ltesrngstf sailhllcsg igfqvlflpv afaslgwawg iiclsiafmw qlyttwllvn
      121 lhepvpgirc srfvrmsila fgpklgklla ifpvmylsgg scvmliitag ssmeqlfnii
      181 ceegtmcgsm slsgtqwfli ftcialiiaq lfpnlnsiar vsltgaitsi gyctmiwals
      241 iskgrpndvs ygipvadrtg mtgfgnilna igiimlafrg hnlileiqgt lpsdskhpsr
      301 ksmwrgvmvs ymiiamclfp laivgfwayg nkipeegilt aftkfhgqdt skyvigliyi
      361 wltiscitsy qiyampafdn lefiyasskk rrcpgwvrag irlffggvtf fvavafpflg
      421 klapliggma avpltfvypc fmwisirkpr akgamwslnl gvgsigivls lllivaavwk
      481 lddkglnanf frp
//
LOCUS       XP_016706880             523 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine histidine transporter-like 8 [Gossypium hirsutum].
ACCESSION   XP_016706880
VERSION     XP_016706880.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706880.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..523
                     /product="lysine histidine transporter-like 8"
                     /calculated_mol_wt=57367
     Region          97..508
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..523
                     /gene="LOC107921554"
                     /coded_by="XM_016851391.2:374..1945"
                     /db_xref="GeneID:107921554"
ORIGIN      
        1 mgdkeigsfp ttprtgsaap tppisappsq lhspsltrsp llstddhiqp asktpksstp
       61 rirtprfitp lgspirralk ltrfdphdaw lpitesrngn ayyaafhtlc sgigiqalvl
      121 pvaftflgws wgiitltvaf iwqlytlyll vhlhespetg mrysrylqlc natfgeklak
      181 wfalfpilyl sagtcitlii igaqscrlff ntvcggtcsa qpptnaewyl iftsaavlls
      241 qlpnlnsiag vslvgaitai ayctliwvis vvegrmpgvs ynpvkgrtev irifdilnal
      301 giiafafrgh nlileiqatm psdekhpsrv pmwkgvkiay tlvamclfpl aiagywaygq
      361 mipvdggmlt alfafhgqdt sqfllgltsl cviisslssf qiygmpafdd meslyvkkkk
      421 epspwwlrli fralfgylcf faavaipfla sfagliggit lpvtlaypcf mwvkvkkpkv
      481 ygpnwwlnws lglfgmalsg lliaaslfvi idngvefsff npa
//
LOCUS       XP_016706394             259 aa            linear   PLN 06-AUG-2024
DEFINITION  expansin-like A2 [Gossypium hirsutum].
ACCESSION   XP_016706394
VERSION     XP_016706394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..259
                     /product="expansin-like A2"
                     /calculated_mol_wt=27881
     Region          13..139
                     /region_name="DPBB_EXLA_N"
                     /note="N-terminal double-psi beta-barrel fold domain of
                     the expansin-like A subfamily; cd22276"
                     /db_xref="CDD:439256"
     Region          145..220
                     /region_name="Expansin_C"
                     /note="Expansin C-terminal domain; pfam01357"
                     /db_xref="CDD:460173"
     CDS             1..259
                     /gene="LOC107921049"
                     /coded_by="XM_016850905.2:102..881"
                     /db_xref="GeneID:107921049"
ORIGIN      
        1 malflcvlfl llssasacdr clhqskaayf skasalsaga cgygslalgl sgghlaagvs
       61 slykdgagcg acfqirckns tlcssegtri tltdlnhnne tdfvlssraf mamankgmgr
      121 dilklgivdv eykripceyk nqnlavrvee ssqkptylai klmyqggqte vvamdvaqvg
      181 sanwnfmsrn hgavwdtsrv pngalqfrfv vtsgfdgkwi waksvlpaew ktgviydsgv
      241 qitdiakegc spcddshwr
//
LOCUS       XP_016707156             229 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5
            [Gossypium hirsutum].
ACCESSION   XP_016707156
VERSION     XP_016707156.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851667.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707156.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG5"
                     /calculated_mol_wt=25077
     Region          14..195
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..229
                     /gene="LOC107921827"
                     /coded_by="XM_016851667.2:834..1523"
                     /db_xref="GeneID:107921827"
ORIGIN      
        1 memegkvvks rfkrvcvfcg sstgkrkcyr daavelaqel varrldlvyg ggsiglmglv
       61 sqavhhaggn vlgiiprtlm skeitgetvg evrpvanmhq rkaemarhsd cfialpggyg
      121 tleellevit waqlgihdkp vgllnvdgyy nylltfidka vddgfikpsq rhiivsapna
      181 telvqkleey vpvhdgiiak asweveqqqq qvpqqvgfna ttfqtqial
//
LOCUS       XP_016706641             323 aa            linear   PLN 06-AUG-2024
DEFINITION  endochitinase 2-like [Gossypium hirsutum].
ACCESSION   XP_016706641
VERSION     XP_016706641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851152.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..323
                     /product="endochitinase 2-like"
                     /calculated_mol_wt=34635
     Region          23..62
                     /region_name="ChtBD1_GH19_hevein"
                     /note="Hevein or Type 1 chitin binding domain subfamily
                     co-occuring with family 19 glycosyl hydrolases or with
                     barwin domains; cd06921"
                     /db_xref="CDD:211312"
     Site            order(41,43..45,47,51..52)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:211312"
     Region          77..308
                     /region_name="Glyco_hydro_19"
                     /note="Chitinase class I; cl46694"
                     /db_xref="CDD:481034"
     CDS             1..323
                     /gene="LOC107921281"
                     /coded_by="XM_016851152.2:185..1156"
                     /db_xref="GeneID:107921281"
ORIGIN      
        1 msflrplsvf ilflsyvvig saeqcgrqag galcpgglcc sqfgwcgsta nyctvpgcqs
       61 qcsgsgpapg pggltnlisr ekfdrmllhr ndggcpargf ytydafiaaa ssfpafattg
      121 dqatrkreia aflaqtshet tggagwaapd ghyawgycyn relnpspyca wnpnypcapg
      181 kqyfgrgpmq ltwnynygqc grsigvdlln npdllssdpt isfksafwfw mtpqspkpsc
      241 hdvvvgawsp sgsdqaagrv pgygvitnii ngglecgkgw dakvedrvgf ykrycdmlgv
      301 gygnnldcyn qrpfgngvlv dsm
//
LOCUS       XP_016706874             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706874
VERSION     XP_016706874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..292
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33220
     Region          49..288
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..292
                     /gene="LOC107921545"
                     /coded_by="XM_016851385.2:1..879"
                     /db_xref="GeneID:107921545"
ORIGIN      
        1 maaqtthhar snsfplqsrp nplvseideh lnrlrdseet stsssishkl nglqdlydcv
       61 dkllrlpfsq qelaqeqnkg pvdelldgsl rlfdlcnttk dillqtkgsi qdiqsvmrrr
      121 pcrevelvge vrkyftsrkv vqktihkalk nvkgvetkri fsssndhetk amvsllreae
      181 avtssmfeyl ftlisgpmer skcgswalvs kllhhkriac eqtgrrdine fekvdaafrs
      241 vmsqkmskse nvemprqlke lelcvqdled gleclfrcmi karvsllnal nh
//
LOCUS       XP_016706783             288 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706783
VERSION     XP_016706783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32051
     Region          54..285
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..288
                     /gene="LOC107921446"
                     /coded_by="XM_016851294.2:820..1686"
                     /db_xref="GeneID:107921446"
ORIGIN      
        1 maasplnvqp sfharsnslp srqhpitsqi denlnrlras qsastsssst gheltclqdl
       61 ydyvdmllqf pltqqalaqd qqrksveqvl daslvlldvc gtgkdallqi kectqelqsv
      121 lrrrrgeveg lgdevrkylt skkevrkais kafknlkhmd nklmskdget gavistlkqv
      181 vaatmgvlqs llsfilgpea ssrwslvskl mhqkrvrcee eeektneian aeaalrsfik
      241 sgnvkhvenv qnelqnsdlc iqdleegles ffrrlikarv tvlnivnc
//
LOCUS       XP_040943404             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943404
VERSION     XP_040943404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087470.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..292
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33121
     Region          49..288
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..292
                     /gene="LOC121213957"
                     /coded_by="XM_041087470.1:96..974"
                     /db_xref="GeneID:121213957"
ORIGIN      
        1 maaqtthhar snsfplqsrp nplvseideh lnrlrdseet stsssishkl nglqdlydcv
       61 dkllrlpfsq qelaqeqnkg pvdelldgsl rlfdlcnttk dillqtkgsi qdiqsvmrrr
      121 pcgevelvge vrkyftsrkv vqktihkalk nvkgvetkri fsssndhetk amvsllreae
      181 avtssmfeyl ftlisgpmer skcgswalvs kllhhkriac eqtgrrdine fekvdaafrs
      241 vmsqkmskse nvemprqlke lelcvqdled gleclfrcmi karvsllnal nh
//
LOCUS       XP_040943405             226 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943405
VERSION     XP_040943405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087471.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..226
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25106
     Region          54..>226
                     /region_name="BPS1"
                     /note="Protein BPS1; pfam03087"
                     /db_xref="CDD:427127"
     CDS             1..226
                     /gene="LOC121213958"
                     /coded_by="XM_041087471.1:822..1502"
                     /db_xref="GeneID:121213958"
ORIGIN      
        1 maasplnvqp sfharsnslp srqhpitsqi denlnrlras qsastsssst gheltclqdl
       61 ydyvdmllqf pltqqalaqd qqrksveqvl daslvlldvc gtakdallqi kectkelqsv
      121 lrrrrgeveg fgdevrkylt skkevrkais kafknlkhmd nklmskdget gsvistlkqv
      181 vaatmgvlqs llsfisgpea ssrwslvskl mhqkrvrcee eeektn
//
LOCUS       XP_016707856             504 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase BSK1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707856
VERSION     XP_016707856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..504
                     /product="serine/threonine-protein kinase BSK1 isoform X1"
                     /calculated_mol_wt=56457
     Region          81..322
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          392..>499
                     /region_name="PLN03088"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional"
                     /db_xref="CDD:215568"
     Site            order(399..400,403..404,406,431,434..435,438..439,
                     441..442,465,468..469,472..473,476)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          399..423
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          429..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          464..490
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..504
                     /gene="LOC107922370"
                     /coded_by="XM_016852367.2:281..1795"
                     /db_xref="GeneID:107922370"
ORIGIN      
        1 mgccqssclt ethpendqsr qqqqehrnhs qavsgagpdp avangvpsfs efsladlkaa
       61 tnnfssdniv sesgekapnl vykgrlqnrk wiavkkftem awpdskqfve eacgvgklrh
      121 rrlanligyc cdgderllva eymindtlak hlfhwenqti ewamrlrvat ciaealdycs
      181 seghplyhdl nayrvlfded gdprlscfgl mknsrdgksy stnlaytppe ylrnvgrvtp
      241 esviysfgtv lvdllsgkhi ppshaldmir gknivllmds hlegkfsmee atvvvglasq
      301 clqyeprerp smkdlvatla plhtkpdvps yvmlgiskye eapptpqrpl spmgeacsrl
      361 dltaihqilv mnhykddegt nelsfqewtq qmrdmleark rgdyafrdkd fktaidcysq
      421 fidvgtmvsp tvfarrslcy lfcdqpdaal adamqaqivn pewptafymq svalakldmh
      481 kdaadmlnea agleekkqrv vkgs
//
LOCUS       XP_016707857             503 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase BSK1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707857
VERSION     XP_016707857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..503
                     /product="serine/threonine-protein kinase BSK1 isoform X2"
                     /calculated_mol_wt=56358
     Region          81..321
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          391..>498
                     /region_name="PLN03088"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional"
                     /db_xref="CDD:215568"
     Site            order(398..399,402..403,405,430,433..434,437..438,
                     440..441,464,467..468,471..472,475)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          398..422
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          428..458
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          463..489
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..503
                     /gene="LOC107922370"
                     /coded_by="XM_016852368.2:280..1791"
                     /db_xref="GeneID:107922370"
ORIGIN      
        1 mgccqssclt ethpendqsr qqqqehrnhs qavsgagpdp avangvpsfs efsladlkaa
       61 tnnfssdniv sesgekapnl vykgrlqnrk wiavkkftem awpdskqfve eacgvgklrh
      121 rrlanligyc cdgderllva eymindtlak hlfhwenqti ewamrlrvat ciaealdycs
      181 seghplyhdl nayrvlfded gdprlscfgl mknsrdgksy stnlaytppe ylrngrvtpe
      241 sviysfgtvl vdllsgkhip pshaldmirg knivllmdsh legkfsmeea tvvvglasqc
      301 lqyeprerps mkdlvatlap lhtkpdvpsy vmlgiskyee apptpqrpls pmgeacsrld
      361 ltaihqilvm nhykddegtn elsfqewtqq mrdmlearkr gdyafrdkdf ktaidcysqf
      421 idvgtmvspt vfarrslcyl fcdqpdaala damqaqivnp ewptafymqs valakldmhk
      481 daadmlneaa gleekkqrvv kgs
//
LOCUS       XP_016707840             814 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707840
VERSION     XP_016707840.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852351.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707840.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..814
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1
                     isoform X1"
                     /calculated_mol_wt=91299
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          390..700
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..814
                     /gene="LOC107922356"
                     /coded_by="XM_016852351.2:300..2744"
                     /db_xref="GeneID:107922356"
ORIGIN      
        1 mgcssskldd lpavalcrer cnfldeaiqq rfalaeahva ytaslklfgq slnnfvdndf
       61 gtssgtlpps ppspnklksk avdpvqvgss spkkdvishh hshshsgshl hfdsgsdedd
      121 sagslhhsdh ssplhhdggg phieylhqny pnygayetgp fpggymhmnf mkkqptpsiv
      181 yeqrpvnpei vymgesssss syynnnnpss ssypypgyqn yggfsnyafy sapgyqsslq
      241 pssmaggsss kppppppspp rtsawdflnp fesyenynhp ytpsrdlrev reaegipdle
      301 denyqhevvk evdgdqkfvd sggyskspae eaakgvvnse aeaslyqsrp svgvendrve
      361 yevhvmdkkv vsdesaeerg kgskgpprnv fevireiqvq fvkasesgse iakllevgtl
      421 pyhrkhaskm lqvvtpslsl vssqpstskt dssanntdpa fldfneelak kqrnlsstlq
      481 klylwekkly nevkaeekmr vaydrkcrkl krldergaea nkvdstrnii rslstkiris
      541 iqvvdkisvt inkirdeelw pllneliegl nrmwkcmlec hhsqcqvike akslgsigsg
      601 kklsddhlka tlqlehelis wtirfsswig aqkgyvraln nwllkclhye pevtddgiap
      661 fspsrvgapr ifvicnqwsq vmdriserev vdsmrifams ifqlweqdks emhqrmmank
      721 dlerkarnld redqklhkei qamdkkivlv sgdgnslsva ghvyqsdtsn aslqgslqri
      781 fdamerfsse sskayeelle rvkeriaqdh ervt
//
LOCUS       XP_016707841             814 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707841
VERSION     XP_016707841.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852352.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707841.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..814
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1
                     isoform X1"
                     /calculated_mol_wt=91299
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          390..700
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..814
                     /gene="LOC107922356"
                     /coded_by="XM_016852352.2:105..2549"
                     /db_xref="GeneID:107922356"
ORIGIN      
        1 mgcssskldd lpavalcrer cnfldeaiqq rfalaeahva ytaslklfgq slnnfvdndf
       61 gtssgtlpps ppspnklksk avdpvqvgss spkkdvishh hshshsgshl hfdsgsdedd
      121 sagslhhsdh ssplhhdggg phieylhqny pnygayetgp fpggymhmnf mkkqptpsiv
      181 yeqrpvnpei vymgesssss syynnnnpss ssypypgyqn yggfsnyafy sapgyqsslq
      241 pssmaggsss kppppppspp rtsawdflnp fesyenynhp ytpsrdlrev reaegipdle
      301 denyqhevvk evdgdqkfvd sggyskspae eaakgvvnse aeaslyqsrp svgvendrve
      361 yevhvmdkkv vsdesaeerg kgskgpprnv fevireiqvq fvkasesgse iakllevgtl
      421 pyhrkhaskm lqvvtpslsl vssqpstskt dssanntdpa fldfneelak kqrnlsstlq
      481 klylwekkly nevkaeekmr vaydrkcrkl krldergaea nkvdstrnii rslstkiris
      541 iqvvdkisvt inkirdeelw pllneliegl nrmwkcmlec hhsqcqvike akslgsigsg
      601 kklsddhlka tlqlehelis wtirfsswig aqkgyvraln nwllkclhye pevtddgiap
      661 fspsrvgapr ifvicnqwsq vmdriserev vdsmrifams ifqlweqdks emhqrmmank
      721 dlerkarnld redqklhkei qamdkkivlv sgdgnslsva ghvyqsdtsn aslqgslqri
      781 fdamerfsse sskayeelle rvkeriaqdh ervt
//
LOCUS       XP_016707842             787 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED PHOSPHATE STARVATION RESPONSE 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707842
VERSION     XP_016707842.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852353.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707842.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..787
                     /product="protein ALTERED PHOSPHATE STARVATION RESPONSE 1
                     isoform X2"
                     /calculated_mol_wt=88493
     Region          1..59
                     /region_name="DUF630"
                     /note="Protein of unknown function (DUF630); pfam04783"
                     /db_xref="CDD:461426"
     Region          390..673
                     /region_name="DUF632"
                     /note="Protein of unknown function (DUF632); pfam04782"
                     /db_xref="CDD:461425"
     CDS             1..787
                     /gene="LOC107922356"
                     /coded_by="XM_016852353.2:227..2590"
                     /db_xref="GeneID:107922356"
ORIGIN      
        1 mgcssskldd lpavalcrer cnfldeaiqq rfalaeahva ytaslklfgq slnnfvdndf
       61 gtssgtlpps ppspnklksk avdpvqvgss spkkdvishh hshshsgshl hfdsgsdedd
      121 sagslhhsdh ssplhhdggg phieylhqny pnygayetgp fpggymhmnf mkkqptpsiv
      181 yeqrpvnpei vymgesssss syynnnnpss ssypypgyqn yggfsnyafy sapgyqsslq
      241 pssmaggsss kppppppspp rtsawdflnp fesyenynhp ytpsrdlrev reaegipdle
      301 denyqhevvk evdgdqkfvd sggyskspae eaakgvvnse aeaslyqsrp svgvendrve
      361 yevhvmdkkv vsdesaeerg kgskgpprnv fevireiqvq fvkasesgse iakllevgtl
      421 pyhrkhaskm lqvvtpslsl vssqpstskt dssanntdpa fldfneelak kqrnlsstlq
      481 klylwekkly nevkaeekmr vaydrkcrkl krldergaea nkvdstrnii rslstkiris
      541 iqvvdkisvt inkirdeelw pllneliegl nrmwkcmlec hhsqcqlehe liswtirfss
      601 wigaqkgyvr alnnwllkcl hyepevtddg iapfspsrvg aprifvicnq wsqvmdrise
      661 revvdsmrif amsifqlweq dksemhqrmm ankdlerkar nldredqklh keiqamdkki
      721 vlvsgdgnsl svaghvyqsd tsnaslqgsl qrifdamerf ssesskayee llervkeria
      781 qdhervt
//
LOCUS       XP_016706495             594 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ROOT HAIR SPECIFIC 17 [Gossypium hirsutum].
ACCESSION   XP_016706495
VERSION     XP_016706495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851006.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..594
                     /product="protein ROOT HAIR SPECIFIC 17"
                     /calculated_mol_wt=67868
     Region          148..468
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(156..159,313,315,387..389,431,450..452)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..594
                     /gene="LOC107921137"
                     /coded_by="XM_016851006.2:22..1806"
                     /db_xref="GeneID:107921137"
ORIGIN      
        1 mlmlknlkql ifsvemkkkk rernnnnill qasnelfigl nvilwrkrhr lfslisavsg
       61 clllllfafs vftppptatd hflshhpsav kktevvesnf dmvlqvpasg gtlgrdlwss
      121 sqskfyygcs nasksfqsad mkthpnrylm iatsgglnqq rtgiidavvv ayilnatlvi
      181 pkldqhsywk dtsgfaeifn vdwfisslsr dveiikelpr negkawiprs mrvprkcnsk
      241 cyqirvlpvl nkkhaveltk fdyrlsnrle tdlqklrcrv nyqalrftds ilelgkilve
      301 rmrmkakqfi alhlrfepdm lafsgcyygg gekergelga irkrwktlhv snpekvrrhg
      361 rcpltpeevg lmlralgfgs dvhiyvasge vyrgeetlap lkalfpnfhs ketiatkeel
      421 apfssfsgrm aaldyivcde sdvfvtnnng nmarilagrr ryfghkptir pnakklyklf
      481 ldrnnmtwde faskvrtyqi gfmgepkevk pgkgefhenp dscicqangl ktpqeddens
      541 kerkegaevs deqqqqpqpl eedpdwtdif yldkelpdvi tkqehteveg ffsd
//
LOCUS       XP_016708172             359 aa            linear   PLN 06-AUG-2024
DEFINITION  lysM domain-containing GPI-anchored protein 2 [Gossypium hirsutum].
ACCESSION   XP_016708172
VERSION     XP_016708172.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852683.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="lysM domain-containing GPI-anchored protein 2"
                     /calculated_mol_wt=38569
     Region          <41..158
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
     Region          176..219
                     /region_name="LysM"
                     /note="LysM domain; pfam01476"
                     /db_xref="CDD:396179"
     CDS             1..359
                     /gene="LOC107922583"
                     /coded_by="XM_016852683.2:252..1331"
                     /db_xref="GeneID:107922583"
ORIGIN      
        1 mrkrnmgfsk lfviilglll altldqctaq efrcsspssc ralvgyitvn ntnlgaiqsl
       61 fnvtsfqsll gandlplstp rnrtiaarql irvpincacy ngtgtssggp tytiqpgdgl
      121 yhiaaevfsq lvlfpqiaaa nnisnpdlia agdtlqiplp cscddidgqk vvhyahvvep
      181 nstlpeiaqe fgtneatlar ingitaqnql kaeqpidvpl kacnssvrsd sldfpllaan
      241 gtyvftangc vrctceaann wtlqcepsqn rpsrwercps mqcedsqgls lgnvttsgcs
      301 rttcsyagfn nstifttlvq dsscttstps ndvsrinlkw diviisvllc lhlvmleti
//
LOCUS       XP_016708142             472 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZ1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708142
VERSION     XP_016708142.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852653.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708142.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..472
                     /product="protein LAZ1 isoform X1"
                     /calculated_mol_wt=53008
     Region          16..297
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..472
                     /gene="LOC107922566"
                     /coded_by="XM_016852653.2:290..1708"
                     /db_xref="GeneID:107922566"
ORIGIN      
        1 mkitdyllgy sppiwatfva gvfsvitisl slflifehls syknpeeqkf ligvvlmvpc
       61 ysiesfvslv hpsisvdcsi lrdcyesfam ycfgrylvac lggeertiaf mrrlgrassk
      121 tpllghscek gtikhpfpmk yflkpwklgr wfyqvvkfgi vqymiikilt allavileaf
      181 gvycegefnw ecgypymavv lnfsqtwafy clvqfytvtk delapikpla kfltfksivf
      241 ltwwqgvaia lfyaldlfrh pvteglhlks svqdfiicie mgiasvvhly vfpskpyelm
      301 gdpipgsvsv lgdyacvdca pdpdeirese rptklrlpqp diearsgmti kesvkdvfig
      361 ggeyivndvk ftvnqavepv ekgitkfnek lhkikdrrkt kddsciatae prvirgiddp
      421 lltgsmsdsa vargkkhckk sgsttsaesg dsscylnsgg ylirgrrwvt kd
//
LOCUS       XP_016708144             308 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZ1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708144
VERSION     XP_016708144.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852655.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708144.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="protein LAZ1 isoform X2"
                     /calculated_mol_wt=35262
     Region          16..280
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..308
                     /gene="LOC107922566"
                     /coded_by="XM_016852655.2:282..1208"
                     /db_xref="GeneID:107922566"
ORIGIN      
        1 mkitdyllgy sppiwatfva gvfsvitisl slflifehls syknpeeqkf ligvvlmvpc
       61 ysiesfvslv hpsisvdcsi lrdcyesfam ycfgrylvac lggeertiaf mrrlgrassk
      121 tpllghscek gtikhpfpmk yflkpwklgr wfyqvvkfgi vqymiikilt allavileaf
      181 gvycegefnw ecgypymavv lnfsqtwafy clvqfytvtk delapikpla kfltfksivf
      241 ltwwqgvaia lfyaldlfrh pvteglhlks svqdfiicie nfdmswysss adghcfccsp
      301 irfpfqti
//
LOCUS       XP_040943406             300 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZ1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943406
VERSION     XP_040943406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087472.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..300
                     /product="protein LAZ1 isoform X3"
                     /calculated_mol_wt=34481
     Region          16..280
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..300
                     /gene="LOC107922566"
                     /coded_by="XM_041087472.1:279..1181"
                     /db_xref="GeneID:107922566"
ORIGIN      
        1 mkitdyllgy sppiwatfva gvfsvitisl slflifehls syknpeeqkf ligvvlmvpc
       61 ysiesfvslv hpsisvdcsi lrdcyesfam ycfgrylvac lggeertiaf mrrlgrassk
      121 tpllghscek gtikhpfpmk yflkpwklgr wfyqvvkfgi vqymiikilt allavileaf
      181 gvycegefnw ecgypymavv lnfsqtwafy clvqfytvtk delapikpla kfltfksivf
      241 ltwwqgvaia lfyaldlfrh pvteglhlks svqdfiicie rrwallllft ytfslpnhms
//
LOCUS       XP_016707899             302 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquinone biosynthesis O-methyltransferase, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016707899
VERSION     XP_016707899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852410.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="ubiquinone biosynthesis O-methyltransferase,
                     mitochondrial"
                     /calculated_mol_wt=33255
     Region          1..302
                     /region_name="PLN02396"
                     /note="hexaprenyldihydroxybenzoate methyltransferase"
                     /db_xref="CDD:178018"
     CDS             1..302
                     /gene="LOC107922391"
                     /coded_by="XM_016852410.2:357..1265"
                     /db_xref="GeneID:107922391"
ORIGIN      
        1 massmflaqr rwflslprnl snarffsalp sehpvsvsgp qnnvgpesnk fekassapss
       61 lkepelakfs aiadtwwdse gpfkplhkmn ptrlaflrst lcrhfrkdpl sarpfeglrf
      121 idvgcgggil seplarmgat vtgidaiekn ikiarlhanl dpttstieyc cttaeklvee
      181 qrkfdavial eviehvadaa efckslsalt ahegatvvst inrsmrsyat aivaaeyllq
      241 wlpkgthqws sfltpeeltm ilkragvdvk emagfvynpl tgrwslsddi svnfiaygtk
      301 ek
//
LOCUS       XP_016707898             302 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquinone biosynthesis O-methyltransferase, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016707898
VERSION     XP_016707898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852409.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="ubiquinone biosynthesis O-methyltransferase,
                     mitochondrial"
                     /calculated_mol_wt=33255
     Region          1..302
                     /region_name="PLN02396"
                     /note="hexaprenyldihydroxybenzoate methyltransferase"
                     /db_xref="CDD:178018"
     CDS             1..302
                     /gene="LOC107922391"
                     /coded_by="XM_016852409.2:503..1411"
                     /db_xref="GeneID:107922391"
ORIGIN      
        1 massmflaqr rwflslprnl snarffsalp sehpvsvsgp qnnvgpesnk fekassapss
       61 lkepelakfs aiadtwwdse gpfkplhkmn ptrlaflrst lcrhfrkdpl sarpfeglrf
      121 idvgcgggil seplarmgat vtgidaiekn ikiarlhanl dpttstieyc cttaeklvee
      181 qrkfdavial eviehvadaa efckslsalt ahegatvvst inrsmrsyat aivaaeyllq
      241 wlpkgthqws sfltpeeltm ilkragvdvk emagfvynpl tgrwslsddi svnfiaygtk
      301 ek
//
LOCUS       XP_016708201             429 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708201
VERSION     XP_016708201.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852712.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="G2/mitotic-specific cyclin-2 isoform X1"
                     /calculated_mol_wt=49283
     Region          155..301
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(174..175,178..179,182..183,186,259..260,263..267,
                     270..272,289,292..293,296..297,300..301)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          306..422
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..429
                     /gene="LOC107922605"
                     /coded_by="XM_016852712.2:136..1425"
                     /db_xref="GeneID:107922605"
ORIGIN      
        1 mrrskennpg siaapndglr mggakmvkdm eqnqrralss inqniigasl hhsgvvnkre
       61 lpgkdefcnk ksaleqrsdt rslavqrvsn qhhfledakn qseltvkpgg lddfeivdve
      121 qcgegndvtl pmfvkhteav ldetdemdie medmensiid idcsdskdpl avveyvddiy
      181 ayykktevss cvspnymdrq fdinekmrai lidwlievhy kfdlmeetlf ltinlidrfl
      241 erctvirkkl qlvgmtamll ackyeevsvp ivedfvlisd kaytrkdvld meklmvntlq
      301 fhmsvptpyv fmrrflkaaq sekkleflsf flielcmvey emlkfqpsll vaaaiytaqc
      361 slfrfknwtk tsewhtkyte dqllecsklm vtyhqkagsg klkgvhrkys sykfgyaakt
      421 epalflldp
//
LOCUS       XP_016708202             429 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708202
VERSION     XP_016708202.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852713.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..429
                     /product="G2/mitotic-specific cyclin-2 isoform X1"
                     /calculated_mol_wt=49283
     Region          155..301
                     /region_name="CYCLIN_AtCycB-like_rpt1"
                     /note="first cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20567"
                     /db_xref="CDD:410270"
     Site            order(174..175,178..179,182..183,186,259..260,263..267,
                     270..272,289,292..293,296..297,300..301)
                     /site_type="other"
                     /note="putative CDK interface [polypeptide binding]"
                     /db_xref="CDD:410270"
     Region          306..422
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..429
                     /gene="LOC107922605"
                     /coded_by="XM_016852713.2:282..1571"
                     /db_xref="GeneID:107922605"
ORIGIN      
        1 mrrskennpg siaapndglr mggakmvkdm eqnqrralss inqniigasl hhsgvvnkre
       61 lpgkdefcnk ksaleqrsdt rslavqrvsn qhhfledakn qseltvkpgg lddfeivdve
      121 qcgegndvtl pmfvkhteav ldetdemdie medmensiid idcsdskdpl avveyvddiy
      181 ayykktevss cvspnymdrq fdinekmrai lidwlievhy kfdlmeetlf ltinlidrfl
      241 erctvirkkl qlvgmtamll ackyeevsvp ivedfvlisd kaytrkdvld meklmvntlq
      301 fhmsvptpyv fmrrflkaaq sekkleflsf flielcmvey emlkfqpsll vaaaiytaqc
      361 slfrfknwtk tsewhtkyte dqllecsklm vtyhqkagsg klkgvhrkys sykfgyaakt
      421 epalflldp
//
LOCUS       XP_040943407             389 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943407
VERSION     XP_040943407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087473.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="G2/mitotic-specific cyclin-2 isoform X2"
                     /calculated_mol_wt=44622
     Region          116..261
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          266..382
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..389
                     /gene="LOC107922605"
                     /coded_by="XM_041087473.1:233..1402"
                     /db_xref="GeneID:107922605"
ORIGIN      
        1 mrrskennpg siaapndglr mggakmvkdm eqnqrralss inqniigasl hhsgvvnkre
       61 lpgkdefcnk ksaleqrsdt rslavqrvsn qhhfledakn qseltvkpgg lddfeivdve
      121 qcgegndvtl pmfvkhteav ldetdemvss cvspnymdrq fdinekmrai lidwlievhy
      181 kfdlmeetlf ltinlidrfl erctvirkkl qlvgmtamll ackyeevsvp ivedfvlisd
      241 kaytrkdvld meklmvntlq fhmsvptpyv fmrrflkaaq sekkleflsf flielcmvey
      301 emlkfqpsll vaaaiytaqc slfrfknwtk tsewhtkyte dqllecsklm vtyhqkagsg
      361 klkgvhrkys sykfgyaakt epalflldp
//
LOCUS       XP_016708204             389 aa            linear   PLN 06-AUG-2024
DEFINITION  G2/mitotic-specific cyclin-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708204
VERSION     XP_016708204.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852715.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="G2/mitotic-specific cyclin-2 isoform X2"
                     /calculated_mol_wt=44622
     Region          116..261
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          266..382
                     /region_name="CYCLIN_AtCycB-like_rpt2"
                     /note="second cyclin box found in Arabidopsis thaliana
                     B-type cyclins (CycBs) and similar proteins; cd20511"
                     /db_xref="CDD:410215"
     CDS             1..389
                     /gene="LOC107922605"
                     /coded_by="XM_016852715.2:136..1305"
                     /db_xref="GeneID:107922605"
ORIGIN      
        1 mrrskennpg siaapndglr mggakmvkdm eqnqrralss inqniigasl hhsgvvnkre
       61 lpgkdefcnk ksaleqrsdt rslavqrvsn qhhfledakn qseltvkpgg lddfeivdve
      121 qcgegndvtl pmfvkhteav ldetdemvss cvspnymdrq fdinekmrai lidwlievhy
      181 kfdlmeetlf ltinlidrfl erctvirkkl qlvgmtamll ackyeevsvp ivedfvlisd
      241 kaytrkdvld meklmvntlq fhmsvptpyv fmrrflkaaq sekkleflsf flielcmvey
      301 emlkfqpsll vaaaiytaqc slfrfknwtk tsewhtkyte dqllecsklm vtyhqkagsg
      361 klkgvhrkys sykfgyaakt epalflldp
//
LOCUS       XP_016708006             630 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 15 [Gossypium hirsutum].
ACCESSION   XP_016708006
VERSION     XP_016708006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852517.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..630
                     /product="U-box domain-containing protein 15"
                     /calculated_mol_wt=70118
     Region          14..147
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Site            order(258,261,263..266,285,289,298)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          259..322
                     /region_name="Ubox"
                     /note="Modified RING finger domain; smart00504"
                     /db_xref="CDD:128780"
     Region          392..417
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          395..>528
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Site            order(408,412,416,449,453,457,490,494,498)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          424..460
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          465..499
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..630
                     /gene="LOC107922468"
                     /coded_by="XM_016852517.2:361..2253"
                     /db_xref="GeneID:107922468"
ORIGIN      
        1 merqfvmdss ssselvremm evietvgsya gfrvtqrkec lnlvrrlkll vplleeikel
       61 dysvsglgla lnsllnlkka llgakkllkn cnygskiyla meseavmcrf havyhkinqa
      121 ldnipfdklg vsievkeqve lmrmqlkrak rrtdtqdmel amdmivifsk kdernadiai
      181 lerlanklel htnaelkaek taiaklvkqr ggynetmhqi vdllgkfkqi agidetvsld
      241 gpistrtaqt cqsplvphef vcpimleimt dpvivatgqt yerdsirkwl nsnhrtcpkt
      301 gqtlehlsla pnfalrnlil qwceknnlel pkkdnyassv nysaeimeem sslvlnlsss
      361 qpnvrrdaiv kirmlskenp enrifiandg giprlvqlls ypdsniqeht vtallnlsid
      421 etnkrliare gaipaiieil qngtdearen saaalfslsm ldenkvlvgn fngipplval
      481 lkngtmrgkk daatalfnls lnqanksrai kagiippllh lladknlgmi dealsillll
      541 ashpegqnei gqlsfietlv eiirngtpkn kecavsvlle lglnnsslil aalqfgvyep
      601 lreisisgtn raqrkansll qhmskcehip
//
LOCUS       XP_016707645             551 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin domain-containing protein DSK2a [Gossypium hirsutum].
ACCESSION   XP_016707645
VERSION     XP_016707645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..551
                     /product="ubiquitin domain-containing protein DSK2a"
                     /calculated_mol_wt=58571
     Region          23..93
                     /region_name="Ubl_Dsk2p_like"
                     /note="ubiquitin-like (Ubl) domain found in Saccharomyces
                     cerevisiae proteasome interacting protein Dsk2p and
                     similar proteins; cd16106"
                     /db_xref="CDD:340523"
     Site            order(27,64,66..69,88,90..91)
                     /site_type="other"
                     /note="Ufd2 interaction site [polypeptide binding]"
                     /db_xref="CDD:340523"
     Site            order(60,62,64,66..67,80,82,88,90..93)
                     /site_type="other"
                     /note="Uba interaction site [polypeptide binding]"
                     /db_xref="CDD:340523"
     Region          379..417
                     /region_name="STI1"
                     /note="Heat shock chaperonin-binding motif; smart00727"
                     /db_xref="CDD:128966"
     Region          509..547
                     /region_name="UBA_PLICs"
                     /note="UBA domain of eukaryotic protein linking
                     integrin-associated protein (IAP, also known as CD47) with
                     cytoskeleton (PLIC) proteins; cd14399"
                     /db_xref="CDD:270582"
     Site            order(518..523,539,542..544,546..547)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270582"
     CDS             1..551
                     /gene="LOC107922237"
                     /coded_by="XM_016852156.2:313..1968"
                     /db_xref="GeneID:107922237"
ORIGIN      
        1 mggegdsses rlgtngedeg llvnircsng skftvrtsle stvgvfksll aqncdvpadq
       61 qrliykgrvl kddqtlqsyg lqadhtihmv rsftpsssip ppaattntat pnstpgvtrg
      121 vgsnegaglg assfpglnal ggngglglfg sglpefeqvq qqltqnpnmm selmntpaiq
      181 slmnnpelmr slivsnpqmr eiidqnpelg hilndpsilq qtleaarnpe lmremmrntd
      241 ramsniessp egfnmlrrmy envqepfmna ttmagnngns pssnpfaall snlgdsqars
      301 lpnntstngs etthgqtspn tnplpnpwgn tvggggaqtn atarsnpagd arapglgglg
      361 glglpdvppm mngmpdasql tqllqnpals qmmqsivsnp qymnqimnln pqlrgmfdln
      421 pqlremmqnp evlrqmfspe tmqqmlglqq sllsqlnqqq stwdssetga ttgapgaagl
      481 eslmnmfggl gagslsvpnq pdvppeelya tqlsqlqemg fydtvenira lratagnvha
      541 averllgnpg q
//
LOCUS       XP_040943408             295 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943408
VERSION     XP_040943408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087474.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..295
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=32787
     CDS             1..295
                     /gene="LOC107922662"
                     /coded_by="XM_041087474.1:985..1872"
                     /db_xref="GeneID:107922662"
ORIGIN      
        1 mmvqqtldpk fseygmlkpe nnspicdeqp pvgvkktplr dlqnenrivp nstgsspfpk
       61 drgpgidpik vsgtkrpspe cpvspsqcqs psscaanghl vyvrrkceae lgkssvfdct
      121 stsncqqmrq vrqpeesnql ksqikelrvp cfptlaplpm asltsssakp svplppgksa
      181 mkltpsessq hpvvtpapfl dslkgirklh weeryyqlqm llkkldqsdq edytqmlrcl
      241 savelsrhai klekrsiqls leeakelqrv nilnvmgrtm kmvkapstqp dqsyk
//
LOCUS       XP_016708279             294 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708279
VERSION     XP_016708279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852790.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..294
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=32656
     CDS             1..294
                     /gene="LOC107922662"
                     /coded_by="XM_016852790.2:311..1195"
                     /db_xref="GeneID:107922662"
ORIGIN      
        1 mvqqtldpkf seygmlkpen nspicdeqpp vgvkktplrd lqnenrivpn stgsspfpkd
       61 rgpgidpikv sgtkrpspec pvspsqcqsp sscaanghlv yvrrkceael gkssvfdcts
      121 tsncqqmrqv rqpeesnqlk sqikelrvpc fptlaplpma sltsssakps vplppgksam
      181 kltpsessqh pvvtpapfld slkgirklhw eeryyqlqml lkkldqsdqe dytqmlrcls
      241 avelsrhaik lekrsiqlsl eeakelqrvn ilnvmgrtmk mvkapstqpd qsyk
//
LOCUS       XP_040943409             294 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943409
VERSION     XP_040943409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087475.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..294
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=32656
     CDS             1..294
                     /gene="LOC107922662"
                     /coded_by="XM_041087475.1:195..1079"
                     /db_xref="GeneID:107922662"
ORIGIN      
        1 mvqqtldpkf seygmlkpen nspicdeqpp vgvkktplrd lqnenrivpn stgsspfpkd
       61 rgpgidpikv sgtkrpspec pvspsqcqsp sscaanghlv yvrrkceael gkssvfdcts
      121 tsncqqmrqv rqpeesnqlk sqikelrvpc fptlaplpma sltsssakps vplppgksam
      181 kltpsessqh pvvtpapfld slkgirklhw eeryyqlqml lkkldqsdqe dytqmlrcls
      241 avelsrhaik lekrsiqlsl eeakelqrvn ilnvmgrtmk mvkapstqpd qsyk
//
LOCUS       XP_016708281             294 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708281
VERSION     XP_016708281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852792.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..294
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=32656
     CDS             1..294
                     /gene="LOC107922662"
                     /coded_by="XM_016852792.2:104..988"
                     /db_xref="GeneID:107922662"
ORIGIN      
        1 mvqqtldpkf seygmlkpen nspicdeqpp vgvkktplrd lqnenrivpn stgsspfpkd
       61 rgpgidpikv sgtkrpspec pvspsqcqsp sscaanghlv yvrrkceael gkssvfdcts
      121 tsncqqmrqv rqpeesnqlk sqikelrvpc fptlaplpma sltsssakps vplppgksam
      181 kltpsessqh pvvtpapfld slkgirklhw eeryyqlqml lkkldqsdqe dytqmlrcls
      241 avelsrhaik lekrsiqlsl eeakelqrvn ilnvmgrtmk mvkapstqpd qsyk
//
LOCUS       XP_016708278             294 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708278
VERSION     XP_016708278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..294
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=32656
     CDS             1..294
                     /gene="LOC107922662"
                     /coded_by="XM_016852789.2:1084..1968"
                     /db_xref="GeneID:107922662"
ORIGIN      
        1 mvqqtldpkf seygmlkpen nspicdeqpp vgvkktplrd lqnenrivpn stgsspfpkd
       61 rgpgidpikv sgtkrpspec pvspsqcqsp sscaanghlv yvrrkceael gkssvfdcts
      121 tsncqqmrqv rqpeesnqlk sqikelrvpc fptlaplpma sltsssakps vplppgksam
      181 kltpsessqh pvvtpapfld slkgirklhw eeryyqlqml lkkldqsdqe dytqmlrcls
      241 avelsrhaik lekrsiqlsl eeakelqrvn ilnvmgrtmk mvkapstqpd qsyk
//
LOCUS       XP_016708277             295 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein ZAT3 [Gossypium hirsutum].
ACCESSION   XP_016708277
VERSION     XP_016708277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852788.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..295
                     /product="zinc finger protein ZAT3"
                     /calculated_mol_wt=32631
     Region          73..96
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          169..193
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          225..250
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..295
                     /gene="LOC107922661"
                     /coded_by="XM_016852788.2:599..1486"
                     /db_xref="GeneID:107922661"
ORIGIN      
        1 mnenifsdng frflssvtqh nvtvnydpkp rkkrtkvvkv dvgqfptcss ttvsrpkytk
       61 kpdpaapkit rpctecgkkf wswkalfghm rchperqwrg inpppnycrp vkpasnvetl
      121 mteddheiaa sllmlangst asesecgtsy rpgvketeaf sqhlganirf ecssckkvfa
      181 shqalgghwa shknvkgcfa itrsegydvk dhscdedkmm mvlghkcsic wkllssgqal
      241 gghkryhwgk gddeasslnl ltakedcgld lnlppaplqn dsypsglald lrlsl
//
LOCUS       XP_016707435             932 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP2 [Gossypium hirsutum].
ACCESSION   XP_016707435
VERSION     XP_016707435.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851946.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707435.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="protein NLP2"
                     /calculated_mol_wt=102960
     Region          614..662
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          835..916
                     /region_name="PB1_NLP"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; cd06407"
                     /db_xref="CDD:99728"
     CDS             1..932
                     /gene="LOC107922103"
                     /coded_by="XM_016851946.2:472..3270"
                     /db_xref="GeneID:107922103"
ORIGIN      
        1 megdgavpsd fspnstfvda amdldlmdel lfegcwletn ddfnfmqpap stsndlnqsi
       61 tvpsnanlhq mhqgetersv sppcdgsavg nassllqpgt fivqgtelgs rwwigpsaes
      121 gsslsvkerl mqaigylkes tkdrdlliqi wvpvnregkh vlttegqpys lntnckslei
      181 frdvsksynf paeedtkesv glpgrvflek lpewtpdvrf frseeypris faekynvrgs
      241 lalpvferan gtclgvveiv ttiqksnyhp elehvckale avdlrsspnf tppnveacne
      301 lyqaalpeia evlrsvckty klplaltwap clnqgksgcr hsyenfyhcv stvdtacfva
      361 deefseflea csehhmfrgq gvvgrafttn kqcfatditv fsktnyplsh harmfglrga
      421 vaiplqsift glvefvlelf lpkdchdsea qkqmlnslsg fmqqacqslh vvvdkmleee
      481 vilpvkevvv asdrrsdkee tqfmvssake nspeesswia hmmeaqqkgk gvsvsweyqk
      541 eepkeefnvt thwednqlel hdkevlsdfq qlhqndeska sveggggdss ssggrgvlps
      601 kragekrrtk mektislevl rqyfagslkd aaksigvcpt tlkricrhhg itrwpsrkik
      661 kvghslrklq lvidsvqgae gaiqigsfys sfpelsspnl sgndrssslk isghskpsep
      721 qlencmfsqg aaapkspsss csqssgsstc csigvkqhst sisalcsadg lmvedpggal
      781 krarsdaelh slkqeepkll arsqshktlg elppletqlp lpktggqnlr tggafrvkat
      841 fgevkirfsl qpswgfrdvq qeiakrfnie dvsrmclkyl dddnewvllt cdadleecrd
      901 iyksfqshti kislhqashp nlgssfgssa pl
//
LOCUS       XP_016707436             932 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP2 [Gossypium hirsutum].
ACCESSION   XP_016707436
VERSION     XP_016707436.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851947.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707436.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="protein NLP2"
                     /calculated_mol_wt=102960
     Region          614..662
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          835..916
                     /region_name="PB1_NLP"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; cd06407"
                     /db_xref="CDD:99728"
     CDS             1..932
                     /gene="LOC107922103"
                     /coded_by="XM_016851947.2:414..3212"
                     /db_xref="GeneID:107922103"
ORIGIN      
        1 megdgavpsd fspnstfvda amdldlmdel lfegcwletn ddfnfmqpap stsndlnqsi
       61 tvpsnanlhq mhqgetersv sppcdgsavg nassllqpgt fivqgtelgs rwwigpsaes
      121 gsslsvkerl mqaigylkes tkdrdlliqi wvpvnregkh vlttegqpys lntnckslei
      181 frdvsksynf paeedtkesv glpgrvflek lpewtpdvrf frseeypris faekynvrgs
      241 lalpvferan gtclgvveiv ttiqksnyhp elehvckale avdlrsspnf tppnveacne
      301 lyqaalpeia evlrsvckty klplaltwap clnqgksgcr hsyenfyhcv stvdtacfva
      361 deefseflea csehhmfrgq gvvgrafttn kqcfatditv fsktnyplsh harmfglrga
      421 vaiplqsift glvefvlelf lpkdchdsea qkqmlnslsg fmqqacqslh vvvdkmleee
      481 vilpvkevvv asdrrsdkee tqfmvssake nspeesswia hmmeaqqkgk gvsvsweyqk
      541 eepkeefnvt thwednqlel hdkevlsdfq qlhqndeska sveggggdss ssggrgvlps
      601 kragekrrtk mektislevl rqyfagslkd aaksigvcpt tlkricrhhg itrwpsrkik
      661 kvghslrklq lvidsvqgae gaiqigsfys sfpelsspnl sgndrssslk isghskpsep
      721 qlencmfsqg aaapkspsss csqssgsstc csigvkqhst sisalcsadg lmvedpggal
      781 krarsdaelh slkqeepkll arsqshktlg elppletqlp lpktggqnlr tggafrvkat
      841 fgevkirfsl qpswgfrdvq qeiakrfnie dvsrmclkyl dddnewvllt cdadleecrd
      901 iyksfqshti kislhqashp nlgssfgssa pl
//
LOCUS       XP_016707437             932 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP2 [Gossypium hirsutum].
ACCESSION   XP_016707437
VERSION     XP_016707437.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851948.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707437.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="protein NLP2"
                     /calculated_mol_wt=102960
     Region          614..662
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          835..916
                     /region_name="PB1_NLP"
                     /note="A PB1 domain is present in NIN like proteins (NLP),
                     a key enzyme in a process of establishment of symbiosis
                     betweeen legumes and nitrogen fixing bacteria (Rhizobium).
                     The PB1 domain is a modular domain mediating specific
                     protein-protein interaction which...; cd06407"
                     /db_xref="CDD:99728"
     CDS             1..932
                     /gene="LOC107922103"
                     /coded_by="XM_016851948.2:285..3083"
                     /db_xref="GeneID:107922103"
ORIGIN      
        1 megdgavpsd fspnstfvda amdldlmdel lfegcwletn ddfnfmqpap stsndlnqsi
       61 tvpsnanlhq mhqgetersv sppcdgsavg nassllqpgt fivqgtelgs rwwigpsaes
      121 gsslsvkerl mqaigylkes tkdrdlliqi wvpvnregkh vlttegqpys lntnckslei
      181 frdvsksynf paeedtkesv glpgrvflek lpewtpdvrf frseeypris faekynvrgs
      241 lalpvferan gtclgvveiv ttiqksnyhp elehvckale avdlrsspnf tppnveacne
      301 lyqaalpeia evlrsvckty klplaltwap clnqgksgcr hsyenfyhcv stvdtacfva
      361 deefseflea csehhmfrgq gvvgrafttn kqcfatditv fsktnyplsh harmfglrga
      421 vaiplqsift glvefvlelf lpkdchdsea qkqmlnslsg fmqqacqslh vvvdkmleee
      481 vilpvkevvv asdrrsdkee tqfmvssake nspeesswia hmmeaqqkgk gvsvsweyqk
      541 eepkeefnvt thwednqlel hdkevlsdfq qlhqndeska sveggggdss ssggrgvlps
      601 kragekrrtk mektislevl rqyfagslkd aaksigvcpt tlkricrhhg itrwpsrkik
      661 kvghslrklq lvidsvqgae gaiqigsfys sfpelsspnl sgndrssslk isghskpsep
      721 qlencmfsqg aaapkspsss csqssgsstc csigvkqhst sisalcsadg lmvedpggal
      781 krarsdaelh slkqeepkll arsqshktlg elppletqlp lpktggqnlr tggafrvkat
      841 fgevkirfsl qpswgfrdvq qeiakrfnie dvsrmclkyl dddnewvllt cdadleecrd
      901 iyksfqshti kislhqashp nlgssfgssa pl
//
LOCUS       XP_040943410            1317 aa            linear   PLN 06-AUG-2024
DEFINITION  NPC intracellular cholesterol transporter 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943410
VERSION     XP_040943410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087476.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1317
                     /product="NPC intracellular cholesterol transporter 1
                     isoform X1"
                     /calculated_mol_wt=144460
     Region          48..1310
                     /region_name="2A060601"
                     /note="Niemann-Pick C type protein family; TIGR00917"
                     /db_xref="CDD:273337"
     CDS             1..1317
                     /gene="LOC107922168"
                     /coded_by="XM_041087476.1:138..4091"
                     /db_xref="GeneID:107922168"
ORIGIN      
        1 mkfpsflaaf sllqlillmq glcaektdsg glsvsyltsg erhseeycam ydicgqrsdg
       61 kvlncpygsp svkpdelfsa qiqscsdtvf ffffffffff lcslyiyfml yqpdelfsak
      121 iqslcpsisg nvcctedqfn tlraqvqqai pflvgcpacl rnflnlfcel scspnqslfi
      181 nvtsvseing nltvdgidff vsdafgegly dsckevkfgt mntraiefig agatnfkewf
      241 dfigqkaplg fpgspyaidf kstvpdlsgm elmnvstysc gdtslgcscg dcpsspqcsn
      301 seppspskkd hcsitigpik vrcidfalai ayiilvlglf gwalfhrqre rilasdrepl
      361 lkstdedean lsnmqydenl alegrgvteq lkngaqlsfi qgymasfyrs ygkwvarnpt
      421 lvlclslavv ivlcfgliri evetrpeklw vghgskaaee kqffdshlap fyrieqlila
      481 tlpdkthgkp ssiisddniq llfeiqekvd giranysgsk vsltdiclkp lgqdcatqsv
      541 lqyfkmdren fdnyggvtha eycfqhytss dtclsafeap ldpstalggf sginyseasa
      601 fvvtypvnna ideagngngk avawekafik lakeellplv qsrnlslsfs sessieeelk
      661 restadiiti avsylvmfay isitlgdasr lstfyisskv llglsgvvlv mlsvlgsvgf
      721 fsafgvkstl iimevipflv lavgvdnmci lvhavkrqpl elpleeqisn alvevgpsit
      781 laslseilaf avggftpmpa crvfslfaaf avlldfllqv tafvsliafd clraednrid
      841 cfpcikipss aeesdegmns rgsglltrym qeihapflgl rgvkvvvvav fvafalasia
      901 lstridsgle qqivlprdsy lqgyftnise ylrigpplyf vvkdynysle srdtnklcsi
      961 nrcdsnslln eisraslvse ssyiakpaas wlddflvwls peafgccrkf tngsycppdd
     1021 qppccspdgg scglggvckd cttcfrhsdl vndrpsteqf reklpwflna lpsadcakgg
     1081 hgaytssvdl sgyesgvika sefrtyhtpl ngqgdyvnal raarefssri sdslkmqifp
     1141 ysvfyiffeq yldiwtialt niaialgaif ivclvftssl wistiivlvl vmivvdlmgv
     1201 mailgiqlna vsvvnlimsi giavefcvhi anaflvsngd rdqrmkkals tigasvfsgi
     1261 tltklvgviv lffsrselfv vyyfqmylal vlvgflhglv flpvvlslmg pparnia
//
LOCUS       XP_040943411            1278 aa            linear   PLN 06-AUG-2024
DEFINITION  NPC intracellular cholesterol transporter 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943411
VERSION     XP_040943411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087477.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1278
                     /product="NPC intracellular cholesterol transporter 1
                     isoform X2"
                     /calculated_mol_wt=139581
     Region          48..1271
                     /region_name="2A060601"
                     /note="Niemann-Pick C type protein family; TIGR00917"
                     /db_xref="CDD:273337"
     CDS             1..1278
                     /gene="LOC107922168"
                     /coded_by="XM_041087477.1:140..3976"
                     /db_xref="GeneID:107922168"
ORIGIN      
        1 mkfpsflaaf sllqlillmq glcaektdsg glsvsyltsg erhseeycam ydicgqrsdg
       61 kvlncpygsp svkpdelfsa kiqslcpsis gnvcctedqf ntlraqvqqa ipflvgcpac
      121 lrnflnlfce lscspnqslf invtsvsein gnltvdgidf fvsdafgegl ydsckevkfg
      181 tmntraiefi gagatnfkew fdfigqkapl gfpgspyaid fkstvpdlsg melmnvstys
      241 cgdtslgcsc gdcpsspqcs nseppspskk dhcsitigpi kvrcidfala iayiilvlgl
      301 fgwalfhrqr erilasdrep llkstdedea nlsnmqyden lalegrgvte qlkngaqlsf
      361 iqgymasfyr sygkwvarnp tlvlclslav vivlcfglir ievetrpekl wvghgskaae
      421 ekqffdshla pfyrieqlil atlpdkthgk pssiisddni qllfeiqekv dgiranysgs
      481 kvsltdiclk plgqdcatqs vlqyfkmdre nfdnyggvth aeycfqhyts sdtclsafea
      541 pldpstalgg fsginyseas afvvtypvnn aideagngng kavawekafi klakeellpl
      601 vqsrnlslsf ssessieeel krestadiit iavsylvmfa yisitlgdas rlstfyissk
      661 vllglsgvvl vmlsvlgsvg ffsafgvkst liimevipfl vlavgvdnmc ilvhavkrqp
      721 lelpleeqis nalvevgpsi tlaslseila favggftpmp acrvfslfaa favlldfllq
      781 vtafvsliaf dclraednri dcfpcikips saeesdegmn srgsglltry mqeihapflg
      841 lrgvkvvvva vfvafalasi alstridsgl eqqivlprds ylqgyftnis eylrigpply
      901 fvvkdynysl esrdtnklcs inrcdsnsll neisraslvs essyiakpaa swlddflvwl
      961 speafgccrk ftngsycppd dqppccspdg gscglggvck dcttcfrhsd lvndrpsteq
     1021 freklpwfln alpsadcakg ghgaytssvd lsgyesgvik asefrtyhtp lngqgdyvna
     1081 lraarefssr isdslkmqif pysvfyiffe qyldiwtial tniaialgai fivclvftss
     1141 lwistiivlv lvmivvdlmg vmailgiqln avsvvnlims igiavefcvh ianaflvsng
     1201 drdqrmkkal stigasvfsg itltklvgvi vlffsrself vvyyfqmyla lvlvgflhgl
     1261 vflpvvlslm gpparnia
//
LOCUS       XP_016707748             249 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016707748
VERSION     XP_016707748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852259.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..249
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 7"
                     /calculated_mol_wt=26529
     Region          207..>249
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          208..249
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(211..212,214..216,218..223,225..227)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     CDS             1..249
                     /gene="LOC107922290"
                     /coded_by="XM_016852259.2:445..1194"
                     /db_xref="GeneID:107922290"
ORIGIN      
        1 masskvittt sqtnpdlprq pslcpslstl ladlqnqqnn qnqsqnglgs mnmddllkni
       61 cssppppppt sdshpqfagv siscegsfsl pkdvanksvd evwkdivvgg ddkrqgnppv
      121 gmtledfltk agavreedvr gvvnqvgvga gvypvdpavi ngggnhfsaf gnsggvdhqr
      181 lvavagggar gkrraveapp ldkatqqkqr rmiknresaa rsrerkhayt veleslvtql
      241 eeekarllr
//
LOCUS       XP_040943412             421 aa            linear   PLN 06-AUG-2024
DEFINITION  tubby-like F-box protein 8 [Gossypium hirsutum].
ACCESSION   XP_040943412
VERSION     XP_040943412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087478.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="tubby-like F-box protein 8"
                     /calculated_mol_wt=46886
     Region          53..97
                     /region_name="F-box_AtTLP-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     TUBBY-like proteins (AtTLPs) and similar proteins;
                     cd22153"
                     /db_xref="CDD:438924"
     Site            order(56,60,63..64,67..68,80,82..83,87..89,91)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438924"
     Region          115..416
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..421
                     /gene="LOC107922483"
                     /coded_by="XM_041087478.1:414..1679"
                     /db_xref="GeneID:107922483"
ORIGIN      
        1 msfrsivrdv rdsfgslsrr sfdvrlvghh rgkshgalhd lhdeplviqn grwanlppel
       61 ltdvikrlee sestwparks vvacasvcqs wrvickdivk spefcgkltf pvslkqpgpr
      121 dgiiqcfikr dkskltyhlf lclspallve ngkfllsaqr trrttsteyi ismnadnisr
      181 ssssyigklr snflgtkfii ydtqpaytas shvpppgrts rrfyskkvsp kvptgsynia
      241 qisyelnvlg trgprkmhci mhsipasalg vggsvpgqpe llrhpledsf rsisfsksld
      301 hsvefsssrf sdvgvshkdd gdgnmrplil knkaprwheq lqcwclnfrg rvtvasvknf
      361 qliaatqpas sgpappdmdk vilqfgkvgk dmftmdyryp lsafqafaic lssfdtklac
      421 e
//
LOCUS       XP_040943413             421 aa            linear   PLN 06-AUG-2024
DEFINITION  tubby-like F-box protein 8 [Gossypium hirsutum].
ACCESSION   XP_040943413
VERSION     XP_040943413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087479.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="tubby-like F-box protein 8"
                     /calculated_mol_wt=46886
     Region          53..97
                     /region_name="F-box_AtTLP-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     TUBBY-like proteins (AtTLPs) and similar proteins;
                     cd22153"
                     /db_xref="CDD:438924"
     Site            order(56,60,63..64,67..68,80,82..83,87..89,91)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438924"
     Region          115..416
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..421
                     /gene="LOC107922483"
                     /coded_by="XM_041087479.1:594..1859"
                     /db_xref="GeneID:107922483"
ORIGIN      
        1 msfrsivrdv rdsfgslsrr sfdvrlvghh rgkshgalhd lhdeplviqn grwanlppel
       61 ltdvikrlee sestwparks vvacasvcqs wrvickdivk spefcgkltf pvslkqpgpr
      121 dgiiqcfikr dkskltyhlf lclspallve ngkfllsaqr trrttsteyi ismnadnisr
      181 ssssyigklr snflgtkfii ydtqpaytas shvpppgrts rrfyskkvsp kvptgsynia
      241 qisyelnvlg trgprkmhci mhsipasalg vggsvpgqpe llrhpledsf rsisfsksld
      301 hsvefsssrf sdvgvshkdd gdgnmrplil knkaprwheq lqcwclnfrg rvtvasvknf
      361 qliaatqpas sgpappdmdk vilqfgkvgk dmftmdyryp lsafqafaic lssfdtklac
      421 e
//
LOCUS       XP_016708037             381 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At1g68170 [Gossypium hirsutum].
ACCESSION   XP_016708037
VERSION     XP_016708037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="WAT1-related protein At1g68170"
                     /calculated_mol_wt=41224
     Region          17..334
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..381
                     /gene="LOC107922484"
                     /coded_by="XM_016852548.2:229..1374"
                     /db_xref="GeneID:107922484"
ORIGIN      
        1 mgeiikilhg lkhamlmvvi qvifagvnvl yklaandgms lriivayrfl fatavmvpla
       61 llvdrerpkl twtillqafl callggtlsq nlymesmalt satfvsaman ltpaitfima
      121 iimgleklgf rtmagrakvl gtvigiggam lltfykglqi nmgsthfhll lshgpissna
      181 pstnhhllga llaltscisy slwlniqakm senypcyyss taliciigti qavvfalcme
      241 kdmnqwklgw nirlltvays gilasglvfs vvswcvrmkg plyvsvfspl mvvlvalags
      301 lfleeklylg siigavlivm glyvvlwgka ketkvvnklv asitspekkt ieivvtssld
      361 nnpcitnngn svfvskdspm k
//
LOCUS       XP_016707600             376 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-100 [Gossypium hirsutum].
ACCESSION   XP_016707600
VERSION     XP_016707600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852111.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..376
                     /product="actin-100"
                     /calculated_mol_wt=41393
     Region          7..371
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..376
                     /gene="LOC107922209"
                     /coded_by="XM_016852111.2:179..1309"
                     /db_xref="GeneID:107922209"
ORIGIN      
        1 madediqplv cdngtgmvka gfagddapra vfpsivgrpr htgvmvgmgq kdayvgdeaq
       61 skrgiltlky piehgivsnw ddmekiwhht fynelrvape ehpvllteap lnpkanrekm
      121 tqimfetfns pamyvaiqav lslyasgrtt givldsgdgv shtvpiyegy alphailrld
      181 lagrdltdsl mkiltergys ftttaereiv rdmkeklayv aldfeqelet aksssaieks
      241 yelpdgqvit igaerfrcpe vlfqpsligm eaagihetty nsimkcdvdi rkdlygnivl
      301 sggstmfpgi adrmskeita lapssmkikv vapperkysv wiggsilasl stfqqmwisk
      361 geydesgpai vhrkcf
//
LOCUS       XP_040943415             376 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-100 [Gossypium hirsutum].
ACCESSION   XP_040943415
VERSION     XP_040943415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087481.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..376
                     /product="actin-100"
                     /calculated_mol_wt=41393
     Region          7..371
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..376
                     /gene="LOC107922209"
                     /coded_by="XM_041087481.1:31..1161"
                     /db_xref="GeneID:107922209"
ORIGIN      
        1 madediqplv cdngtgmvka gfagddapra vfpsivgrpr htgvmvgmgq kdayvgdeaq
       61 skrgiltlky piehgivsnw ddmekiwhht fynelrvape ehpvllteap lnpkanrekm
      121 tqimfetfns pamyvaiqav lslyasgrtt givldsgdgv shtvpiyegy alphailrld
      181 lagrdltdsl mkiltergys ftttaereiv rdmkeklayv aldfeqelet aksssaieks
      241 yelpdgqvit igaerfrcpe vlfqpsligm eaagihetty nsimkcdvdi rkdlygnivl
      301 sggstmfpgi adrmskeita lapssmkikv vapperkysv wiggsilasl stfqqmwisk
      361 geydesgpai vhrkcf
//
LOCUS       XP_040943416             288 aa            linear   PLN 06-AUG-2024
DEFINITION  endonuclease 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943416
VERSION     XP_040943416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087482.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="endonuclease 2 isoform X1"
                     /calculated_mol_wt=32583
     Region          26..288
                     /region_name="S1-P1_nuclease"
                     /note="S1/P1 Nuclease; pfam02265"
                     /db_xref="CDD:426688"
     Site            order(31,70,83..84,86,144,148,154,178,182)
                     /site_type="active"
                     /db_xref="CDD:211382"
     CDS             1..288
                     /gene="LOC107921808"
                     /coded_by="XM_041087482.1:46..912"
                     /db_xref="GeneID:107921808"
ORIGIN      
        1 mgecrmqkml aflslmlvtl ppiygwgtdg hsiickiaqt rlseeaadav kqllpkwaed
       61 dlgsvcswad qvkfryrwss plhfintpet csyqykrdck dedgeagrcv againnytsq
      121 lltynsaadk aeynltesll flvhfmgdih qplhvgfasd kggntidvhw yktkqvlhhv
      181 wdtniietae erfynsnvdg mvdaiqqnit newadqvkrw etcslnktac pdiyasegik
      241 aacdwaykgv keesvleddy fvsrlpiiyw rlaqggvrla atlnrifg
//
LOCUS       XP_040943417             238 aa            linear   PLN 06-AUG-2024
DEFINITION  endonuclease 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943417
VERSION     XP_040943417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087483.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..238
                     /product="endonuclease 2 isoform X2"
                     /calculated_mol_wt=26987
     Region          26..>224
                     /region_name="S1-P1_nuclease"
                     /note="S1/P1 Nuclease; pfam02265"
                     /db_xref="CDD:426688"
     Site            order(31,70,83..84,86,144,148,154,178,182)
                     /site_type="active"
                     /db_xref="CDD:211382"
     CDS             1..238
                     /gene="LOC107921808"
                     /coded_by="XM_041087483.1:45..761"
                     /db_xref="GeneID:107921808"
ORIGIN      
        1 mgecrmqkml aflslmlvtl ppiygwgtdg hsiickiaqt rlseeaadav kqllpkwaed
       61 dlgsvcswad qvkfryrwss plhfintpet csyqykrdck dedgeagrcv againnytsq
      121 lltynsaadk aeynltesll flvhfmgdih qplhvgfasd kggntidvhw yktkqvlhhv
      181 wdtniietae erfynsnvdg mvdaiqqnit newadqvkrw etcslnktac pdmyqssl
//
LOCUS       XP_016707183             479 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 9 [Gossypium hirsutum].
ACCESSION   XP_016707183
VERSION     XP_016707183.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851694.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707183.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..479
                     /product="probable WRKY transcription factor 9"
                     /calculated_mol_wt=53328
     Region          <20..261
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          243..300
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..479
                     /gene="LOC107921861"
                     /coded_by="XM_016851694.2:99..1538"
                     /db_xref="GeneID:107921861"
ORIGIN      
        1 mgrseekeme idlsltldtk qehmeavkdq tkmqrddnqh kavdlqdked qqtsmaatge
       61 vevedsaplq ghskaeelsm lqmemnrmke enqvlrkeve rtlqdynhlq mkfaviqqnn
      121 pnkeprifls lngnesssqe qqanqrnlnt vnhrkhgspl lhenddeekn elglslrlet
      181 sstqrgigee ehkkesqgap nvesvqnklh qsqpsaitsh avstpnrkpr vsvrarcqta
      241 tmndgcqwrk ygqkiakgnp cprayyrctv apgcpvrkqv qrclddmsvl ittyegthnh
      301 pvpvgatama siassaspsf vlldssssls ngipnnhhin slptnlsdps kgilhnltnn
      361 hhfnhqmlpt vpsahqqvfp wmpsrlnqhn grewkssede dksllaenvk aiatdpnfrv
      421 avaaaitslt nkeaqtnhhh pipmgsslvg resesgsssa nnwvleslle tskpihhsp
//
LOCUS       XP_016707671             629 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707671
VERSION     XP_016707671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852182.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="uncharacterized protein"
                     /calculated_mol_wt=66811
     Region          <224..505
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..629
                     /gene="LOC107922250"
                     /coded_by="XM_016852182.2:1109..2998"
                     /db_xref="GeneID:107922250"
ORIGIN      
        1 mersepslvp ewlkcsgslt gsgnssnqft sssssshsdn hsalrharnk lsvdsdgdig
       61 rtsvldrass ayfrrssssk gasdswsysn fgkghrerdw ekvsngyhdr knavlsdhrn
      121 rnysdsldnl ppsmfekdvl rrsqslktgk hsdtwprkat nessgtgksh hssgngklst
      181 vaavgnksaf erdfpslgae vrqvgseigr ilspgltnpv qslpvgtspv lgsdgrtsal
      241 adipvgvgns grgvavasqn vpagstpttv tglnmaeava qgpsrartpp llnvetqrle
      301 elaikqsrql iplvtvstpk tlvvspseks rpkvgqqlhp slsfgstrgg tsrsdsqkvs
      361 nesrllilkp sresngvssi ttrdnlsptn gsnkfanspi nitpsaaasv pfrssgnspr
      421 lataernqtp vrmtmekrat aqaqsrndff nllkkkstsn sassvldsgs avsppvseks
      481 delgtedsst svtlqdggvp sseisiadlp adnrsevaln gdayaesqhg ssngdehsrp
      541 daylypdeee vaflrslgwe enaedddglt eeeisaffeq ymklkpsakv sqlmqslspl
      601 nsqngthgda lsgsssmdsn gaawtrqnv
//
LOCUS       XP_016707672             629 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707672
VERSION     XP_016707672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852183.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..629
                     /product="uncharacterized protein"
                     /calculated_mol_wt=66811
     Region          <224..505
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..629
                     /gene="LOC107922250"
                     /coded_by="XM_016852183.2:670..2559"
                     /db_xref="GeneID:107922250"
ORIGIN      
        1 mersepslvp ewlkcsgslt gsgnssnqft sssssshsdn hsalrharnk lsvdsdgdig
       61 rtsvldrass ayfrrssssk gasdswsysn fgkghrerdw ekvsngyhdr knavlsdhrn
      121 rnysdsldnl ppsmfekdvl rrsqslktgk hsdtwprkat nessgtgksh hssgngklst
      181 vaavgnksaf erdfpslgae vrqvgseigr ilspgltnpv qslpvgtspv lgsdgrtsal
      241 adipvgvgns grgvavasqn vpagstpttv tglnmaeava qgpsrartpp llnvetqrle
      301 elaikqsrql iplvtvstpk tlvvspseks rpkvgqqlhp slsfgstrgg tsrsdsqkvs
      361 nesrllilkp sresngvssi ttrdnlsptn gsnkfanspi nitpsaaasv pfrssgnspr
      421 lataernqtp vrmtmekrat aqaqsrndff nllkkkstsn sassvldsgs avsppvseks
      481 delgtedsst svtlqdggvp sseisiadlp adnrsevaln gdayaesqhg ssngdehsrp
      541 daylypdeee vaflrslgwe enaedddglt eeeisaffeq ymklkpsakv sqlmqslspl
      601 nsqngthgda lsgsssmdsn gaawtrqnv
//
LOCUS       XP_016706866            2187 aa            linear   PLN 06-AUG-2024
DEFINITION  separase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706866
VERSION     XP_016706866.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851377.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706866.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2187
                     /product="separase isoform X1"
                     /calculated_mol_wt=244670
     Region          1663..2080
                     /region_name="Peptidase_C50"
                     /note="Peptidase family C50; pfam03568"
                     /db_xref="CDD:460974"
     CDS             1..2187
                     /gene="LOC107921536"
                     /coded_by="XM_016851377.2:123..6686"
                     /db_xref="GeneID:107921536"
ORIGIN      
        1 matttessll sdlqtsddsk gihslvsdyl hpistlansk kkkpdqaavr slakqflsfl
       61 sksfpiiykr iyiqnpnqqq haslsyffet yrlcitclef vssqlaggah lvqiqrlklv
      121 yclqswgryd eaesealrvl erlrgevksk gkfvpgidia ggdskfgsiv veavasvvks
      181 vamghckdsg kyervlalle qvrpwcrale advvekshnv lvtflgrccr flieeinhfg
      241 eelirgfcne claeyarsmm kdqvfkfarr icsslfller tdssvqidlv tfllvsisre
      301 ckvdiynnam efvelvdyca ykcrdagttf cstlakrlng magdfhqati pvdlilrlya
      361 tgldfsvrnv klkyndctts kgveddsaid vlflerdklh nlsgllgllg nccnigksdp
      421 siasdveckn slpckdkkac lvmyyntlkf lcqplaelvn sekkrilaet eassdssslc
      481 iiqdafyqfc dsffslvsca setkregfdd geevlvpsii vagfilstct kckipksvcy
      541 ikqiigsgri qsqglkyvyv slynigvlmy rskqikealk alklshrasw tniqllremf
      601 ihrkssgdhl sedvvrdlvt dactrsafll evlhacgnlk vekiivesle nwsalenlfr
      661 qlsgpmplik qwvkiqcklh knkdledsap tlccmllssa evskmaicki leqellayqe
      721 mthgypdfcq rmqikvinll lqdayaieds pllkarmlir kgrtirangi ealkdciwcl
      781 seaisimknf ysetsiagtp achqlaaayc llalctqeae pnseqlyqdi yaaldlwlsi
      841 fipdscfvdd efkmvsgntl qllynvldll svkgytklhs siykliiriy klnnvelgic
      901 vanlwecrrl shalcvspvn esfitnlseh cggssksvdf wmhslsgsqp gllgfqqnlt
      961 cffnnfnhgl knpesdiqsa vsannvnlva seliasdpvr shslflagyl yydlcerqic
     1021 rgrlfeglsy akeafrlrsq lfkrkftfsi ealvekynes gdigeiaqta ingpknlqvh
     1081 rivaselwsf dssssnlcgc ylspwnvlqc ylesilqvgc inemigngve aesfllwgks
     1141 iscsqnlplf eatfssilgk lyrkkrlwnf aeqelqsakr ilvdssshcs circrlmlea
     1201 nldqqlgdlf rnlfdisiin dskgklsrae vlyksalekl ncsewkniic daesnvdlav
     1261 rntiingedv agnaatqpea igarkgrktk nvsksvmkeq hviperrssr vtrsrfrssq
     1321 nqsttctgea qieilkhsng nvasklsdtc wekdssllgk gscmeeltse iacfcnqtkc
     1381 whclpaeimk sglliyfinm kweyahrkll vriltgtgkc lgygdqthei hevvwqsisv
     1441 lvsrnaytqt cssahrtfll dligretvgd tfaieraatl yrigwmtlkg fhskvaridc
     1501 cdlskvqlsk tvhwlklafv lsrevpvlfq kvsrllsaiy llsatsehfa lpsckalses
     1561 hwasyfhqas lgthlnnqff pstsgrsnaq rfvdsgdlng vvsscahtet stllrlapgs
     1621 vndleqfvmn fyvglpgtai icisllghdy tnllqellly pssihawlll srlnsknqpv
     1681 vlllpldsvl eevsddaapn ddnaracqel rqlmnsgkkw hcpwgstvvd nvapafkmil
     1741 eenfmtssgc pledtkstrs lwwmvrkkvd hqlgkllsnl edswlgpwrh vllgdcldcr
     1801 slntvhkklv qdlkskckmd inesylklfl gaakfdikea clsqrclrkg cytgklehhe
     1861 qensqtngid dvsalasqli reavnelhme daicrepiil vldlevqmlp wesipilrqq
     1921 evyrmpsvgs isiilersqr yhelactnaa afplidplda fyllnpsgdl sstqaefenw
     1981 frdqnfegka gtvptaeela talkshdlyl yfghgsgeqy lskdeiqgle kcaatvlmgc
     2041 ssgslrlngc yvprgvslsy iqagspvtia nlwevtdkdi drfgkavlna wlrermdlvd
     2101 csqcnqlvke feamkikgrk gnsrkksass nltetansgs stnacehrpt vgsfvgrare
     2161 sctlpflnga spvcygvptg imkkkdl
//
LOCUS       XP_040943419            2064 aa            linear   PLN 06-AUG-2024
DEFINITION  separase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943419
VERSION     XP_040943419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087485.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2064
                     /product="separase isoform X2"
                     /calculated_mol_wt=231128
     Region          1540..1957
                     /region_name="Peptidase_C50"
                     /note="Peptidase family C50; pfam03568"
                     /db_xref="CDD:460974"
     CDS             1..2064
                     /gene="LOC107921536"
                     /coded_by="XM_041087485.1:123..6317"
                     /db_xref="GeneID:107921536"
ORIGIN      
        1 matttessll sdlqtsddsk gihslvsdyl hpistlansk kkkpdqaavr slakqflsfl
       61 sksfpiiykr iyiqnpnqqq haslsyffet yrlcitclef vssqlaggah lvqiqrlklv
      121 yclqswgryd eaesealrvl erlrgevksk gkfvpgidia ggdskfgsiv veavasvvks
      181 vamghckdsg kyervlalle qvrpwcrale advvekshnv lvtflgrccr flieeinhfg
      241 eelirgfcne claeyarsmm kdqvfkfarr icsslfller tdssvqidlv tfllvsisre
      301 ckvdiynnam efvelvdyca ykcrdagttf cstlakrlng magdfhqati pvdlilrlya
      361 tgldfsvrnv klkyndctts kgveddsaid vlflerdklh nlsgllgllg nccnigksdp
      421 siasdveckn slpckdkkac lvmyyntlkf lcqplaelvn sekkrilaet eassdssslc
      481 iiqdafyqfc dsffslvsca setkregfdd geevlvpsii vagfilstct kckipksvcy
      541 ikqiigsgri qsqglkyvyv slynigvlmy rskqikealk alklshrasw tniqllremf
      601 ihrkssgdhl sedvvrdlvt dactrsafll evlhacgnlk vekiivesle nwsalenlfr
      661 qlsgpmplik qwvkiqcklh knkdledsap tlccmllssa evskmaicki leqellayqe
      721 mthgypdfcq rmqikvinll lqdayaieds pllkarmlir kgrtirangi ealkdciwcl
      781 seaisimknf ysetsiagtp achqlaaayc llalctqeae pnseqlyqdi yaaldlwlsi
      841 fipdscfvdd efkmvsgntl qllynvldll svkdpvrshs lflagylyyd lcerqicrgr
      901 lfeglsyake afrlrsqlfk rkftfsieal vekynesgdi geiaqtaing pknlqvhriv
      961 aselwsfdss ssnlcgcyls pwnvlqcyle silqvgcine migngveaes fllwgksisc
     1021 sqnlplfeat fssilgklyr kkrlwnfaeq elqsakrilv dssshcscir crlmleanld
     1081 qqlgdlfrnl fdisiindsk gklsraevly ksaleklncs ewkniicdae snvdlavrnt
     1141 iingedvagn aatqpeaiga rkgrktknvs ksvmkeqhvi perrssrvtr srfrssqnqs
     1201 ttctgeaqie ilkhsngnva sklsdtcwek dssllgkgsc meeltseiac fcnqtkcwhc
     1261 lpaeimksgl liyfinmkwe yahrkllvri ltgtgkclgy gdqtheihev vwqsisvlvs
     1321 rnaytqtcss ahrtflldli gretvgdtfa ieraatlyri gwmtlkgfhs kvaridccdl
     1381 skvqlsktvh wlklafvlsr evpvlfqkvs rllsaiylls atsehfalps ckalseshwa
     1441 syfhqaslgt hlnnqffpst sgrsnaqrfv dsgdlngvvs scahtetstl lrlapgsvnd
     1501 leqfvmnfyv glpgtaiici sllghdytnl lqelllypss ihawlllsrl nsknqpvvll
     1561 lpldsvleev sddaapnddn aracqelrql mnsgkkwhcp wgstvvdnva pafkmileen
     1621 fmtssgcple dtkstrslww mvrkkvdhql gkllsnleds wlgpwrhvll gdcldcrsln
     1681 tvhkklvqdl kskckmdine sylklflgaa kfdikeacls qrclrkgcyt gklehheqen
     1741 sqtngiddvs alasqlirea vnelhmedai crepiilvld levqmlpwes ipilrqqevy
     1801 rmpsvgsisi ilersqryhe lactnaaafp lidpldafyl lnpsgdlsst qaefenwfrd
     1861 qnfegkagtv ptaeelatal kshdlylyfg hgsgeqylsk deiqglekca atvlmgcssg
     1921 slrlngcyvp rgvslsyiqa gspvtianlw evtdkdidrf gkavlnawlr ermdlvdcsq
     1981 cnqlvkefea mkikgrkgns rkksassnlt etansgsstn acehrptvgs fvgraresct
     2041 lpflngaspv cygvptgimk kkdl
//
LOCUS       XP_040943420            1852 aa            linear   PLN 06-AUG-2024
DEFINITION  separase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943420
VERSION     XP_040943420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087486.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1852
                     /product="separase isoform X3"
                     /calculated_mol_wt=207038
     Region          1328..1745
                     /region_name="Peptidase_C50"
                     /note="Peptidase family C50; pfam03568"
                     /db_xref="CDD:460974"
     CDS             1..1852
                     /gene="LOC107921536"
                     /coded_by="XM_041087486.1:218..5776"
                     /db_xref="GeneID:107921536"
ORIGIN      
        1 mawqvifiri sqatipvdli lrlyatgldf svrnvklkyn dcttskgved dsaidvlfle
       61 rdklhnlsgl lgllgnccni gksdpsiasd vecknslpck dkkaclvmyy ntlkflcqpl
      121 aelvnsekkr ilaeteassd ssslciiqda fyqfcdsffs lvscasetkr egfddgeevl
      181 vpsiivagfi lstctkckip ksvcyikqii gsgriqsqgl kyvyvslyni gvlmyrskqi
      241 kealkalkls hraswtniql lremfihrks sgdhlsedvv rdlvtdactr safllevlha
      301 cgnlkvekii veslenwsal enlfrqlsgp mplikqwvki qcklhknkdl edsaptlccm
      361 llssaevskm aickileqel layqemthgy pdfcqrmqik vinlllqday aiedspllka
      421 rmlirkgrti rangiealkd ciwclseais imknfysets iagtpachql aaaycllalc
      481 tqeaepnseq lyqdiyaald lwlsifipds cfvddefkmv sgntlqllyn vldllsvkgy
      541 tklhssiykl iiriyklnnv elgicvanlw ecrrlshalc vspvnesfit nlsehcggss
      601 ksvdfwmhsl sgsqpgllgf qqnltcffnn fnhglknpes diqsavsann vnlvaselia
      661 sdpvrshslf lagylyydlc erqicrgrlf eglsyakeaf rlrsqlfkrk ftfsiealve
      721 kynesgdige iaqtaingpk nlqvhrivas elwsfdssss nlcgcylspw nvlqcylesi
      781 lqvgcinemi gngveaesfl lwgksiscsq nlplfeatfs silgklyrkk rlwnfaeqel
      841 qsakrilvds sshcscircr lmleanldqq lgdlfrnlfd isiindskgk lsraevlyks
      901 aleklncsew kniicdaesn vdlavrntii ngedvagnaa tqpeaigark grktknvsks
      961 vmkeqhvipe rrssrvtrsr frssqnqstt ctgeaqieil khsngnvask lsdtcwekds
     1021 sllgkgscme eltseiacfc nqtkcwhclp aeimksglli yfinmkweya hrkllvrilt
     1081 gtgkclgygd qtheihevvw qsisvlvsrn aytqtcssah rtflldligr etvgdtfaie
     1141 raatlyrigw mtlkgfhskv aridccdlsk vqlsktvhwl klafvlsrev pvlfqkvsrl
     1201 lsaiyllsat sehfalpsck alseshwasy fhqaslgthl nnqffpstsg rsnaqrfvds
     1261 gdlngvvssc ahtetstllr lapgsvndle qfvmnfyvgl pgtaiicisl lghdytnllq
     1321 elllypssih awlllsrlns knqpvvlllp ldsvleevsd daapnddnar acqelrqlmn
     1381 sgkkwhcpwg stvvdnvapa fkmileenfm tssgcpledt kstrslwwmv rkkvdhqlgk
     1441 llsnledswl gpwrhvllgd cldcrslntv hkklvqdlks kckmdinesy lklflgaakf
     1501 dikeaclsqr clrkgcytgk lehheqensq tngiddvsal asqlireavn elhmedaicr
     1561 epiilvldle vqmlpwesip ilrqqevyrm psvgsisiil ersqryhela ctnaaafpli
     1621 dpldafylln psgdlsstqa efenwfrdqn fegkagtvpt aeelatalks hdlylyfghg
     1681 sgeqylskde iqglekcaat vlmgcssgsl rlngcyvprg vslsyiqags pvtianlwev
     1741 tdkdidrfgk avlnawlrer mdlvdcsqcn qlvkefeamk ikgrkgnsrk ksassnltet
     1801 ansgsstnac ehrptvgsfv graresctlp flngaspvcy gvptgimkkk dl
//
LOCUS       XP_016707785             359 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707785
VERSION     XP_016707785.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852296.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707785.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=40343
     Region          53..219
                     /region_name="DUF1644"
                     /note="Protein of unknown function (DUF1644); pfam07800"
                     /db_xref="CDD:462269"
     CDS             1..359
                     /gene="LOC107922314"
                     /coded_by="XM_016852296.2:107..1186"
                     /db_xref="GeneID:107922314"
ORIGIN      
        1 mracslqmak ggkgrrrtas qqtpfllhcr rqgisgdlhh rkcskaldnr dwedatcsvc
       61 mecphnavll lcsshdkgcr pymcgtsfry sncldqykkf htkvvpfnhe eplhtsidns
      121 vlaagsswpv ekceateisc plcrgqvkgw tvvepareyl nakkrscmqd dctfvgtfke
      181 lrkhmkadhp caqpreadpt ieqkwrrler ereqedvist irstmpgamv fgdyviernh
      241 hgfetdeegg ldtadaierg gdfdvgldnn vlnfflflha fgpsgndlgr rtrqpthaad
      301 enavgvhlts pvgghqdddy fndgggnvsl vsrlrrhgrv llgrsgrrrr rrediggqm
//
LOCUS       XP_040943421             357 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943421
VERSION     XP_040943421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087487.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..357
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=40115
     Region          51..217
                     /region_name="DUF1644"
                     /note="Protein of unknown function (DUF1644); pfam07800"
                     /db_xref="CDD:462269"
     CDS             1..357
                     /gene="LOC107922314"
                     /coded_by="XM_041087487.1:18..1091"
                     /db_xref="GeneID:107922314"
ORIGIN      
        1 mcslqmakgg kgrrrtasqq tpfllhcrrq gisgdlhhrk cskaldnrdw edatcsvcme
       61 cphnavlllc sshdkgcrpy mcgtsfrysn cldqykkfht kvvpfnheep lhtsidnsvl
      121 aagsswpvek ceateiscpl crgqvkgwtv vepareylna kkrscmqddc tfvgtfkelr
      181 khmkadhpca qpreadptie qkwrrlerer eqedvistir stmpgamvfg dyviernhhg
      241 fetdeeggld tadaierggd fdvgldnnvl nfflflhafg psgndlgrrt rqpthaaden
      301 avgvhltspv gghqdddyfn dgggnvslvs rlrrhgrvll grsgrrrrrr ediggqm
//
LOCUS       XP_016707786             352 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707786
VERSION     XP_016707786.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852297.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707786.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=39553
     Region          46..212
                     /region_name="DUF1644"
                     /note="Protein of unknown function (DUF1644); pfam07800"
                     /db_xref="CDD:462269"
     CDS             1..352
                     /gene="LOC107922314"
                     /coded_by="XM_016852297.2:231..1289"
                     /db_xref="GeneID:107922314"
ORIGIN      
        1 makggkgrrr tasqqtpfll hcrrqgisgd lhhrkcskal dnrdwedatc svcmecphna
       61 vlllcsshdk gcrpymcgts frysncldqy kkfhtkvvpf nheeplhtsi dnsvlaagss
      121 wpvekceate iscplcrgqv kgwtvvepar eylnakkrsc mqddctfvgt fkelrkhmka
      181 dhpcaqprea dptieqkwrr lerereqedv istirstmpg amvfgdyvie rnhhgfetde
      241 eggldtadai erggdfdvgl dnnvlnfflf lhafgpsgnd lgrrtrqpth aadenavgvh
      301 ltspvgghqd ddyfndgggn vslvsrlrrh grvllgrsgr rrrrredigg qm
//
LOCUS       XP_016707788             352 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707788
VERSION     XP_016707788.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852299.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707788.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=39553
     Region          46..212
                     /region_name="DUF1644"
                     /note="Protein of unknown function (DUF1644); pfam07800"
                     /db_xref="CDD:462269"
     CDS             1..352
                     /gene="LOC107922314"
                     /coded_by="XM_016852299.2:487..1545"
                     /db_xref="GeneID:107922314"
ORIGIN      
        1 makggkgrrr tasqqtpfll hcrrqgisgd lhhrkcskal dnrdwedatc svcmecphna
       61 vlllcsshdk gcrpymcgts frysncldqy kkfhtkvvpf nheeplhtsi dnsvlaagss
      121 wpvekceate iscplcrgqv kgwtvvepar eylnakkrsc mqddctfvgt fkelrkhmka
      181 dhpcaqprea dptieqkwrr lerereqedv istirstmpg amvfgdyvie rnhhgfetde
      241 eggldtadai erggdfdvgl dnnvlnfflf lhafgpsgnd lgrrtrqpth aadenavgvh
      301 ltspvgghqd ddyfndgggn vslvsrlrrh grvllgrsgr rrrrredigg qm
//
LOCUS       XP_016707789             352 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707789
VERSION     XP_016707789.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852300.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707789.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=39553
     Region          46..212
                     /region_name="DUF1644"
                     /note="Protein of unknown function (DUF1644); pfam07800"
                     /db_xref="CDD:462269"
     CDS             1..352
                     /gene="LOC107922314"
                     /coded_by="XM_016852300.2:321..1379"
                     /db_xref="GeneID:107922314"
ORIGIN      
        1 makggkgrrr tasqqtpfll hcrrqgisgd lhhrkcskal dnrdwedatc svcmecphna
       61 vlllcsshdk gcrpymcgts frysncldqy kkfhtkvvpf nheeplhtsi dnsvlaagss
      121 wpvekceate iscplcrgqv kgwtvvepar eylnakkrsc mqddctfvgt fkelrkhmka
      181 dhpcaqprea dptieqkwrr lerereqedv istirstmpg amvfgdyvie rnhhgfetde
      241 eggldtadai erggdfdvgl dnnvlnfflf lhafgpsgnd lgrrtrqpth aadenavgvh
      301 ltspvgghqd ddyfndgggn vslvsrlrrh grvllgrsgr rrrrredigg qm
//
LOCUS       XP_016706241             160 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L17 [Gossypium hirsutum].
ACCESSION   XP_016706241
VERSION     XP_016706241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850752.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="50S ribosomal protein L17"
                     /calculated_mol_wt=18358
     Region          2..118
                     /region_name="RplQ"
                     /note="Ribosomal protein L17 [Translation, ribosomal
                     structure and biogenesis]; COG0203"
                     /db_xref="CDD:439973"
     CDS             1..160
                     /gene="LOC107920921"
                     /coded_by="XM_016850752.2:224..706"
                     /db_xref="GeneID:107920921"
ORIGIN      
        1 mtkfrklnrp tghrmsmlrt mvsqlvkher iettvakake irrladnmvq lgkegslcaa
       61 rhaaafvrgd dvihklftel ayrykdragg ytrllrtrir vgdaapmayi efidrenelr
      121 qskpptpqpp qrpsldpwtr srlsrqfapp keekssesei
//
LOCUS       XP_016706405             229 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA turnover protein 4 homolog [Gossypium hirsutum].
ACCESSION   XP_016706405
VERSION     XP_016706405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="mRNA turnover protein 4 homolog"
                     /calculated_mol_wt=26150
     Region          24..184
                     /region_name="Ribosomal_P0_like"
                     /note="Ribosomal protein L10 family, P0-like protein
                     subfamily; composed of uncharacterized eukaryotic proteins
                     with similarity to the 60S ribosomal protein P0, including
                     the Saccharomyces cerevisiae protein called mRNA turnover
                     protein 4 (MRT4). MRT4 may be...; cd05796"
                     /db_xref="CDD:240222"
     Site            order(24,27,70..73,76)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:240222"
     Site            order(111,131,135,153,156..157,160..161,163..166,169..171,
                     174..175,177..178,180)
                     /site_type="other"
                     /note="putative Interface with L7/L12 ribosomal proteins
                     [polypeptide binding]"
                     /db_xref="CDD:240222"
     CDS             1..229
                     /gene="LOC107921063"
                     /coded_by="XM_016850916.2:158..847"
                     /db_xref="GeneID:107921063"
ORIGIN      
        1 mpkskrnkiv slsktkkkgk ehkesivnai reaaedynsi yvfsfenmrn lkfkefrekl
       61 kptsrfflgs nkvmqvalgr svsdeirpgl ykvskllrgd aglfltnmpr devescfnkf
      121 eendfartgt iatekvelle gpldqfthem epflrkqgmp vrlnkgvvel vsdfvvceeg
      181 kplspesari lrllgikmat frlnlicrws pedfelykeg ldesdvesa
//
LOCUS       XP_016706535             231 aa            linear   PLN 06-AUG-2024
DEFINITION  partner of Y14 and mago [Gossypium hirsutum].
ACCESSION   XP_016706535
VERSION     XP_016706535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..231
                     /product="partner of Y14 and mago"
                     /calculated_mol_wt=25580
     Region          25..51
                     /region_name="Mago-bind"
                     /note="Mago binding; pfam09282"
                     /db_xref="CDD:462741"
     CDS             1..231
                     /gene="LOC107921171"
                     /coded_by="XM_016851046.2:169..864"
                     /db_xref="GeneID:107921171"
ORIGIN      
        1 masnnvggee qwqkmaelsk tlkegerila ptrrpdgtlr kpiriragyv pqeevaiyqs
       61 kgalwkkema sqvvppgydp padakpktks akrnerkkek rlqaalekgk nleevsdden
      121 tredvpeedl dgsksvkslt sqmsdlafsq npvstsppsn tvdasdagap vldldkkira
      181 lkkkirlaea qqqktpqqdm kpeqleklak vegwreelkl legkkaelaa l
//
LOCUS       XP_016707832             511 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 87B [Gossypium hirsutum].
ACCESSION   XP_016707832
VERSION     XP_016707832.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707832.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..511
                     /product="transmembrane protein 87B"
                     /calculated_mol_wt=56957
     Region          170..455
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..511
                     /gene="LOC107922347"
                     /coded_by="XM_016852343.2:221..1756"
                     /db_xref="GeneID:107922347"
ORIGIN      
        1 mdsaylisif lllstaltti nasihiyqnq lfnevgnayl lpggseglaa srssdnsvsd
       61 grsfirfeni tfwrtqaaad eqsdkehgtg liqavifeaa drnniggsay ggqrsicctp
      121 dlaklegckq geviripsst dskwpmvlni yfggndlsts mdnakvpimk tgmynlffia
      181 cdpklkgttm sgktvwknpd gylpgrmapl kkfyvymmia ylllsaiwfs qyvrfwkdil
      241 llqhcitavi glglfemilw yfdysnfnst gmrpvvittw vvtvgairkt lsrlltlsvs
      301 mgygvvrptl ggltskvlll gatyflaael lditeyvgti ndisgrarlf lvlpdaflda
      361 flilwiftsl sktleqlqvk risakldlyr kfsnalavav iasvawitfe vyfkatdpfn
      421 erwqsawiit afwdilsfal lcvicylwap sqssqryays edvkdefdde eaqsltrgqs
      481 dgdvnlvkqe rnngnagvsd peddseedkr e
//
LOCUS       XP_016707819             232 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR34A [Gossypium hirsutum].
ACCESSION   XP_016707819
VERSION     XP_016707819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="serine/arginine-rich splicing factor SR34A"
                     /calculated_mol_wt=26137
     Region          8..79
                     /region_name="RRM1_SRSF1_like"
                     /note="RNA recognition motif 1 (RRM1) found in
                     serine/arginine-rich splicing factor 1 (SRSF1) and similar
                     proteins; cd12338"
                     /db_xref="CDD:409775"
     Region          112..185
                     /region_name="RRM2_SF2_plant_like"
                     /note="RNA recognition motif 2 (RRM2) found in plant
                     pre-mRNA-splicing factor SF2 and similar proteins;
                     cd12602"
                     /db_xref="CDD:410014"
     CDS             1..232
                     /gene="LOC107922336"
                     /coded_by="XM_016852330.2:568..1266"
                     /db_xref="GeneID:107922336"
ORIGIN      
        1 masrssrtiy vgnlpldvke weiedlfyky ghildielkl psrppgfcfv efedpldaed
       61 airgrdgynf dgcrirvefa hggrgqssrh dygggssrgg rgrfsvshrs efrvvvrglp
      121 ssaswqdlkd hmrkagdvcf aevhqdgdga mgivdytnyd dmkyairkld dsefrnpfar
      181 ayirvncyea spcrgqsqsr shiksprgnq rsvsksrsps parlsrsrsr sn
//
LOCUS       XP_016707820             232 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR34A [Gossypium hirsutum].
ACCESSION   XP_016707820
VERSION     XP_016707820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852331.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="serine/arginine-rich splicing factor SR34A"
                     /calculated_mol_wt=26137
     Region          8..79
                     /region_name="RRM1_SRSF1_like"
                     /note="RNA recognition motif 1 (RRM1) found in
                     serine/arginine-rich splicing factor 1 (SRSF1) and similar
                     proteins; cd12338"
                     /db_xref="CDD:409775"
     Region          112..185
                     /region_name="RRM2_SF2_plant_like"
                     /note="RNA recognition motif 2 (RRM2) found in plant
                     pre-mRNA-splicing factor SF2 and similar proteins;
                     cd12602"
                     /db_xref="CDD:410014"
     CDS             1..232
                     /gene="LOC107922336"
                     /coded_by="XM_016852331.2:338..1036"
                     /db_xref="GeneID:107922336"
ORIGIN      
        1 masrssrtiy vgnlpldvke weiedlfyky ghildielkl psrppgfcfv efedpldaed
       61 airgrdgynf dgcrirvefa hggrgqssrh dygggssrgg rgrfsvshrs efrvvvrglp
      121 ssaswqdlkd hmrkagdvcf aevhqdgdga mgivdytnyd dmkyairkld dsefrnpfar
      181 ayirvncyea spcrgqsqsr shiksprgnq rsvsksrsps parlsrsrsr sn
//
LOCUS       XP_016708041             644 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SUPPRESSOR OF GENE SILENCING 3 [Gossypium hirsutum].
ACCESSION   XP_016708041
VERSION     XP_016708041.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852552.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708041.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..644
                     /product="protein SUPPRESSOR OF GENE SILENCING 3"
                     /calculated_mol_wt=74020
     Region          226..264
                     /region_name="zf-XS"
                     /note="XS zinc finger domain; pfam03470"
                     /db_xref="CDD:251981"
     Region          297..411
                     /region_name="XS"
                     /note="XS domain; pfam03468"
                     /db_xref="CDD:460933"
     Region          403..>610
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..644
                     /gene="LOC107922486"
                     /coded_by="XM_016852552.2:181..2115"
                     /db_xref="GeneID:107922486"
ORIGIN      
        1 madstdsfpd lrsvykssgh qvnrlsqnva nmklasaqdg dkenslgsnn kgaenvgfpq
       61 dstpnvwghp nviqklrmqg nrgsekvthk awptqnavsw tqqgdrtwgn ssikspssey
      121 grndpdqagf tfsnnswdgq iktdhevgdk lddeigdnen vddeygngvs nieydsddid
      181 dyvsgsdede kshearkesk wfyfffesle kltveeilsp vrrwhcpacq ggpgainwyr
      241 gvqpllthsm tkttrraklh rvfagllvee mrrrgafikp vndafgrweg ltdrvadhei
      301 vwppmviimn tryeqdengk wigignqell nyfssyaavk arhsygpqgh rgmsllifes
      361 saagyletar lhkhfkeqgr drdawdcsrv pfcpggkrql ygyiamkedl dlfnqhsqgk
      421 sklkfetrsy qemvesqikk idddsqqlnl lkkkvaqeqq psqvlaeslg rlseklrqtt
      481 eeygimrqqt rlqheqnkee lgakeqyfke kinviyqaik lkednfeklq raarervers
      541 natlinnedq hsateleens rsitiqekkm eefeaerekl mkshqdgrla itqryweeli
      601 eleegfekel tllmgkynpd rleeettdsl egrdkrgard iete
//
LOCUS       XP_040943422             123 aa            linear   PLN 06-AUG-2024
DEFINITION  basic blue protein [Gossypium hirsutum].
ACCESSION   XP_040943422
VERSION     XP_040943422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087488.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="basic blue protein"
                     /calculated_mol_wt=12967
     Region          28..122
                     /region_name="Plantacyanin"
                     /note="Plantacyanin is a subclass of phytocyanins, plant
                     type I copper proteins; cd11013"
                     /db_xref="CDD:259899"
     CDS             1..123
                     /gene="LOC107921532"
                     /coded_by="XM_041087488.1:228..599"
                     /db_xref="GeneID:107921532"
ORIGIN      
        1 mvqgrcsava atvllcclll hfevaqsasf tvggrggwtf naaawpkgkp fkagdtlvfn
       61 ynpsihnvva vnragyksck apkgakvfks gkdqiklkkg qnfficnyig hcqagmkiav
      121 taa
//
LOCUS       XP_016707848             825 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707848
VERSION     XP_016707848.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707848.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=92492
     Region          563..793
                     /region_name="DUF639"
                     /note="Plant protein of unknown function (DUF639);
                     pfam04842"
                     /db_xref="CDD:368150"
     CDS             1..825
                     /gene="LOC107922362"
                     /coded_by="XM_016852359.2:440..2917"
                     /db_xref="GeneID:107922362"
ORIGIN      
        1 mfaklpvthq kastfgfshl issnkdaskl gyfsinsasr hklrfkfvga hgdrwkhtna
       61 vqesinswls ktqhfltevt lplvktgqig kpdpgnevdt qdmddiflge qtitssmpng
      121 nlsfaaivsi eqfsrlnglt gqkmqnifka lvpkpvydda rnlveyccfr flsrdasalh
      181 pclkepafqr lifitmiawe npysgkndlr ahasrkasfq gklvgeeaft riapaipgva
      241 dhptvhnlfk alagdekgis lrvwltyihe llkvhearks yqiheypqls eerilytgss
      301 rkqpvlkwen nmawpgkltl tdkalyfeav giqgpkeair ldltehglqv kkvkvgpfns
      361 gvfdsgvavs sgpgskwvle fvdlggelrr dvwhafisei ialhkflsey gpddddqslf
      421 qvfgshkgkd kattgaingi arlqalqslr kllddpiklv qfsflqnapr gdavfqtlav
      481 nywgghlvae ltdagypqaq gmspckeeye isdhvfdidg svylrkwmrs pswgssasig
      541 fwkhssvrqa vvlnknlvia detlveraat ickqkyqaae rtqatidaak lqgipcnidl
      601 fkelilpfal iarnfeklkr weephltlsf laftytiifr nllpyvfpat livlaigmlt
      661 lkglkeqgrl grsfgkvtvc dqppsntiqk ivalkdamrd vecylqnlnv tllklrtill
      721 agqpqvttev alvllssatl llivpfkyvi afllcdlftq elkfrremvk kflsflkerw
      781 ltvpaapviv lpfedresga anqrsqmdrk snqkegrsvt rlesf
//
LOCUS       XP_040943423             789 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943423
VERSION     XP_040943423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087489.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..789
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=88315
     Region          527..757
                     /region_name="DUF639"
                     /note="Plant protein of unknown function (DUF639);
                     pfam04842"
                     /db_xref="CDD:368150"
     CDS             1..789
                     /gene="LOC107922362"
                     /coded_by="XM_041087489.1:380..2749"
                     /db_xref="GeneID:107922362"
ORIGIN      
        1 mfaklpvthq kastfgfshl issnkdaskl gyfsinsasr hklrfkfvga hgdrwkhtna
       61 vqesinswls ktqhfltevt lplvktgqig kpdpgnevdt qdmddiflge qtitssmpng
      121 nlsfaaivsi eqfsrlnglt gqkmqnifka lvpkpvydda rnlveyccfr flsrdasalh
      181 pclkgklvge eaftriapai pgvadhptvh nlfkalagde kgislrvwlt yihellkvhe
      241 arksyqihey pqlseerily tgssrkqpvl kwennmawpg kltltdkaly feavgiqgpk
      301 eairldlteh glqvkkvkvg pfnsgvfdsg vavssgpgsk wvlefvdlgg elrrdvwhaf
      361 iseiialhkf lseygpdddd qslfqvfgsh kgkdkattga ingiarlqal qslrkllddp
      421 iklvqfsflq naprgdavfq tlavnywggh lvaeltdagy pqaqgmspck eeyeisdhvf
      481 didgsvylrk wmrspswgss asigfwkhss vrqavvlnkn lviadetlve raatickqky
      541 qaaertqati daaklqgipc nidlfkelil pfaliarnfe klkrweephl tlsflaftyt
      601 iifrnllpyv fpatlivlai gmltlkglke qgrlgrsfgk vtvcdqppsn tiqkivalkd
      661 amrdvecylq nlnvtllklr tillagqpqv ttevalvlls satlllivpf kyviafllcd
      721 lftqelkfrr emvkkflsfl kerwltvpaa pvivlpfedr esgaanqrsq mdrksnqkeg
      781 rsvtrlesf
//
LOCUS       XP_016711654             273 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation of fatty acids protein 3-like [Gossypium hirsutum].
ACCESSION   XP_016711654
VERSION     XP_016711654.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016856165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016711654.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..273
                     /product="elongation of fatty acids protein 3-like"
                     /calculated_mol_wt=30844
     Region          60..265
                     /region_name="ELO"
                     /note="GNS1/SUR4 family; pfam01151"
                     /db_xref="CDD:460083"
     CDS             1..273
                     /gene="LOC107925465"
                     /coded_by="XM_016856165.2:1..822"
                     /db_xref="GeneID:107925465"
ORIGIN      
        1 mdqiysslqy wlvnhpkilh fqwtegqtlg stplflaltv lsyltltlll srstlpslgp
       61 nilkpitalh slnlflisli mavgctlsii slpsplphii cfppntpptg plffwanify
      121 lskllefidt lliilsnskq rltflhvyhh gtvvvmcylw lrtsqtlfpv alvtnatvhv
      181 imyfyyllca mgirpkwkrl vtncqivqfm fsfmvsvlml cyyfsglgcs gmlgwcfnal
      241 fnasllalfl dfhgksyaak qkkvavvdkd krs
//
LOCUS       XP_016706477             245 aa            linear   PLN 06-AUG-2024
DEFINITION  probable plastid-lipid-associated protein 4, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016706477
VERSION     XP_016706477.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850988.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706477.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..245
                     /product="probable plastid-lipid-associated protein 4,
                     chloroplastic"
                     /calculated_mol_wt=27365
     Region          77..235
                     /region_name="PAP_fibrillin"
                     /note="pfam04755"
                     /db_xref="CDD:309752"
     CDS             1..245
                     /gene="LOC107921119"
                     /coded_by="XM_016850988.2:160..897"
                     /db_xref="GeneID:107921119"
ORIGIN      
        1 malsptfhti ltislsapsp klppsisspq rfpflikplh pnafnlstss sapdqkwrvn
       61 vsffpaflnk gkdakvlkqd lldciapldr gadatpedqq rvdqlaskle avnptkqplk
      121 sdllngkwel iyttsksilq tqrpkflrss tnyqainvdt lraqnmeswp ffnqvtadlt
      181 plnarkvavk fdyfkiggli pikapgrarg eleityldee lrisrgdlgn lfilkmidrs
      241 yrvpv
//
LOCUS       XP_040943424             156 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor KUA1 [Gossypium hirsutum].
ACCESSION   XP_040943424
VERSION     XP_040943424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087490.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="transcription factor KUA1"
                     /calculated_mol_wt=17352
     Region          <1..41
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(25..26,28..29,31..33,35..37)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..156
                     /gene="LOC121213964"
                     /coded_by="XM_041087490.1:233..703"
                     /db_xref="GeneID:121213964"
ORIGIN      
        1 mfleglrklg kgnwkgisen yvtsrtpiqv ashaqkyflr lqhasnnkek rrpdfptyqs
       61 riqpmaeevt pnvmqslpfl htmnyagprh gyigkahvav capadhpspr lvqdnmfrag
      121 pgasstekdl lelkiappqs snsttlqsqp firvin
//
LOCUS       XP_016706859             335 aa            linear   PLN 06-AUG-2024
DEFINITION  RHOMBOID-like protein 10, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706859
VERSION     XP_016706859.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706859.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..335
                     /product="RHOMBOID-like protein 10, chloroplastic"
                     /calculated_mol_wt=37283
     Region          132..286
                     /region_name="GlpG"
                     /note="Membrane-associated serine protease, rhomboid
                     family [Posttranslational modification, protein turnover,
                     chaperones]; COG0705"
                     /db_xref="CDD:440469"
     CDS             1..335
                     /gene="LOC107921529"
                     /coded_by="XM_016851370.2:395..1402"
                     /db_xref="GeneID:107921529"
ORIGIN      
        1 mgstlpqpfp fkwdlpteep tfhlittaas lrlgnllrhq lhlgfhlrss fkklchlcnv
       61 prlnhvwset isnfmgignf rfandvvcss cssylcffng geqrkyfgne gnsgsskmdt
      121 srrnsfntrk wtnillainv liyvaqlatq gklllwgaki nslidkgqiw rlatysllha
      181 nighlmvncy slnsigptve nlsgprrfla vyltsaissa atsywfckap avgasgaifg
      241 lvgsvavfvm rhrymirdak edlqhiaqvi flnmviglms rgidnwghlg gllggaavsw
      301 ligpawkyes masdgrrifs dqpplfyltd rkwkp
//
LOCUS       XP_016707175             290 aa            linear   PLN 06-AUG-2024
DEFINITION  YDG domain-containing protein At5g47160 [Gossypium hirsutum].
ACCESSION   XP_016707175
VERSION     XP_016707175.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851686.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..290
                     /product="YDG domain-containing protein At5g47160"
                     /calculated_mol_wt=33194
     Region          115..269
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     CDS             1..290
                     /gene="LOC107921851"
                     /coded_by="XM_016851686.2:180..1052"
                     /db_xref="GeneID:107921851"
ORIGIN      
        1 mvssrpkpvk egplskskqa rhvgkvvrhv kvhprgicsn qqtaftpewy ecrsaikeal
       61 rcyrrllsdk dyresiskdh gmglergkps gigqhmrlak lvrclgkwvn takqigcvag
      121 ievgdgfhwr gelcivglhs efrkgidcit slngskiwat sivdsgryds ctrkvssdef
      181 tycgegenps fcgfkklkdq klvggnralm nnmidrkpvr virrfdnign tnesgykfvy
      241 eglyqvnhcw keirmdsgky vykfnlvkle dhlqyepqwk vnnvrtrryh
//
LOCUS       XP_016706570             419 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g10780 [Gossypium hirsutum].
ACCESSION   XP_016706570
VERSION     XP_016706570.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851081.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706570.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..419
                     /product="F-box protein At1g10780"
                     /calculated_mol_wt=47372
     Region          1..34
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(4..5,7..9,12..13,16,28..30,32)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438882"
     Site            order(4,8,11..12,15..16,21,23..24,28..30,32)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438882"
     Region          151..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          176..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..419
                     /gene="LOC107921199"
                     /coded_by="XM_016851081.2:245..1504"
                     /db_xref="GeneID:107921199"
ORIGIN      
        1 meslpdaivq yilshlnnar dvavcncvsk rwkeslpylk slyfprnsfd gytgsdspdi
       61 viwkmlssit cleelvvysp ftssglaswl llvhsslkhl elrmdnitdy kacvdspskl
      121 dcvsaaknle slklwgvlma nppkwdvfkn lksleivgar ledsalsaal racpkltnlv
      181 llgcegvrsv svelpyleqc kldfyglgnc slsltcpkie llevqgcswl rvrettclrk
      241 lliannsgrv ymvdfgklsa leslsmrgvq wcwdaiskml ewssevkhly mkveftgdle
      301 sllpfpevdf veffnshpkl qkfdihgamf aalcqknslk nveqgfvipc leevvvqvrs
      361 plnaeqkmst lesllkygkn lktmvirilq mksnhsssdd ffdeicrlrf mnrkivrie
//
LOCUS       XP_016706733             108 aa            linear   PLN 06-AUG-2024
DEFINITION  organ-specific protein P4 [Gossypium hirsutum].
ACCESSION   XP_016706733
VERSION     XP_016706733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="organ-specific protein P4"
                     /calculated_mol_wt=12867
     Region          24..>91
                     /region_name="Organ_specific"
                     /note="Organ specific protein; pfam10950"
                     /db_xref="CDD:402502"
     CDS             1..108
                     /gene="LOC107921384"
                     /coded_by="XM_016851244.2:118..444"
                     /db_xref="GeneID:107921384"
ORIGIN      
        1 mktlffffif csfllygnln harkeprdyw ksvmkeqpip eaiqgllhqd easamdsenf
       61 vkdfdsrhsf iiyhsnlkhk eeedktyvkd lknqkqhkse kknqtekp
//
LOCUS       XP_016708271             404 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 12 [Gossypium hirsutum].
ACCESSION   XP_016708271
VERSION     XP_016708271.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852782.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..404
                     /product="protein trichome birefringence-like 12"
                     /calculated_mol_wt=46818
     Region          51..104
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          108..396
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..404
                     /gene="LOC107922655"
                     /coded_by="XM_016852782.2:109..1323"
                     /db_xref="GeneID:107922655"
ORIGIN      
        1 mptklyssif psifflslif lflystflpl ytnndssslp tnkflpsssp pcnlfkghwv
       61 lnstkgkpfy ddtcpfhrna wnclknkrdn mgiinswkwv pkdcklervd pwrflglmrn
      121 rnigfvgdsl nenflvsflc ilrvadegak kwkkkgawrg ayfpkynvtv ayhravllak
      181 ykwnpkqsvv sdedelkgiy rvdvdilade wssiadfyhv lvfntghwwg ydkfpketpl
      241 vfyrhgrpis pplglldgfk vvledmvhhi qkevpkntlk fwrlqsprhf yggdwnqngs
      301 clfdrpleee qldlwfdpsn ngvnkeartl nhlikeavqg tdiqlldlth lsefradahp
      361 aiwlgkkdav siwgqdcmhw clpglpdtwv dilvqlihns fetg
//
LOCUS       XP_016708068             507 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sphingolipid transporter spinster homolog 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708068
VERSION     XP_016708068.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708068.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..507
                     /product="probable sphingolipid transporter spinster
                     homolog 2 isoform X1"
                     /calculated_mol_wt=55015
     Region          22..451
                     /region_name="MFS_spinster_like"
                     /note="Protein spinster and spinster homologs of the Major
                     Facilitator Superfamily of transporters; cd17328"
                     /db_xref="CDD:340886"
     Site            order(32..33,36..37,40,89,139..140,142..144,147,167,
                     170..171,174,295,298..299,302..304,307,334,338,388..389,
                     393,397,417,420..421,424..425,428)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340886"
     CDS             1..507
                     /gene="LOC107922506"
                     /coded_by="XM_016852579.2:205..1728"
                     /db_xref="GeneID:107922506"
ORIGIN      
        1 masslvplsa phpswftpkr llvifcvinm lnyvdrgtia sngvngslgt ctssgtctsg
       61 sgiqgefnln nfedgvlssa fmvgllvasp ifaslsksvn pfrligvgls vwtlatagcg
      121 fsfnfwsiti crmlvgvgea sfislaapfi ddnapiaqkt awlaifymci ptgyalgyvy
      181 gglvgtylnw rfafwveail mlpfavlgfv mkplnlkgfa paeskqalis eetdvqevqd
      241 tdalndsakp tkekfshmfs kmkctcidln qfsrfikdmk allvdkvyvv nvlgycaynf
      301 vlgaysywgp kagykiynis dadlifggit ivcgilgtla ggyvldlmks tipnafklls
      361 vttffgaifc ftafcfqnmy aflaffsvge llvfaiqgpv nyiclhcvnp slrplsmais
      421 tvsihifgdv pssplvgvlq dainnwrets liltsilfpa agiwftgifl hsvdrfneds
      481 egqvtevdrs natplleprv aetslfc
//
LOCUS       XP_016708069             505 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sphingolipid transporter spinster homolog 2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016708069
VERSION     XP_016708069.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852580.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708069.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..505
                     /product="probable sphingolipid transporter spinster
                     homolog 2 isoform X2"
                     /calculated_mol_wt=54799
     Region          22..449
                     /region_name="MFS_spinster_like"
                     /note="Protein spinster and spinster homologs of the Major
                     Facilitator Superfamily of transporters; cd17328"
                     /db_xref="CDD:340886"
     Site            order(32..33,36..37,40,89,139..140,142..144,147,167,
                     170..171,174,293,296..297,300..302,305,332,336,386..387,
                     391,395,415,418..419,422..423,426)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340886"
     CDS             1..505
                     /gene="LOC107922506"
                     /coded_by="XM_016852580.2:205..1722"
                     /db_xref="GeneID:107922506"
ORIGIN      
        1 masslvplsa phpswftpkr llvifcvinm lnyvdrgtia sngvngslgt ctssgtctsg
       61 sgiqgefnln nfedgvlssa fmvgllvasp ifaslsksvn pfrligvgls vwtlatagcg
      121 fsfnfwsiti crmlvgvgea sfislaapfi ddnapiaqkt awlaifymci ptgyalgyvy
      181 gglvgtylnw rfafwveail mlpfavlgfv mkplnlkgfa paeskqalis eetdvqevqd
      241 alndsakptk ekfshmfskm kctcidlnqf srfikdmkal lvdkvyvvnv lgycaynfvl
      301 gaysywgpka gykiynisda dlifggitiv cgilgtlagg yvldlmksti pnafkllsvt
      361 tffgaifcft afcfqnmyaf laffsvgell vfaiqgpvny iclhcvnpsl rplsmaistv
      421 sihifgdvps splvgvlqda innwretsli ltsilfpaag iwftgiflhs vdrfnedseg
      481 qvtevdrsna tplleprvae tslfc
//
LOCUS       XP_040943425             485 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sphingolipid transporter spinster homolog 2 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943425
VERSION     XP_040943425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087491.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..485
                     /product="probable sphingolipid transporter spinster
                     homolog 2 isoform X3"
                     /calculated_mol_wt=52510
     Region          22..429
                     /region_name="MFS_spinster_like"
                     /note="Protein spinster and spinster homologs of the Major
                     Facilitator Superfamily of transporters; cd17328"
                     /db_xref="CDD:340886"
     Site            order(32..33,36..37,40,89,139..140,142..144,147,167,
                     170..171,174,312,316,366..367,371,375,395,398..399,
                     402..403,406)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340886"
     CDS             1..485
                     /gene="LOC107922506"
                     /coded_by="XM_041087491.1:205..1662"
                     /db_xref="GeneID:107922506"
ORIGIN      
        1 masslvplsa phpswftpkr llvifcvinm lnyvdrgtia sngvngslgt ctssgtctsg
       61 sgiqgefnln nfedgvlssa fmvgllvasp ifaslsksvn pfrligvgls vwtlatagcg
      121 fsfnfwsiti crmlvgvgea sfislaapfi ddnapiaqkt awlaifymci ptgyalgyvy
      181 gglvgtylnw rfafwveail mlpfavlgfv mkplnlkgfa paeskqalis eetdvqevqd
      241 tdalndsakp tkekfshmfs kmkctcidln qfsrfikdmk allvdkvyvv nvlaifqsda
      301 dlifggitiv cgilgtlagg yvldlmksti pnafkllsvt tffgaifcft afcfqnmyaf
      361 laffsvgell vfaiqgpvny iclhcvnpsl rplsmaistv sihifgdvps splvgvlqda
      421 innwretsli ltsilfpaag iwftgiflhs vdrfnedseg qvtevdrsna tplleprvae
      481 tslfc
//
LOCUS       XP_040943426             478 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sphingolipid transporter spinster homolog 2 isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040943426
VERSION     XP_040943426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087492.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="probable sphingolipid transporter spinster
                     homolog 2 isoform X4"
                     /calculated_mol_wt=51808
     Region          1..422
                     /region_name="MFS_spinster_like"
                     /note="Protein spinster and spinster homologs of the Major
                     Facilitator Superfamily of transporters; cd17328"
                     /db_xref="CDD:340886"
     Site            order(3..4,7..8,11,60,110..111,113..115,118,138,141..142,
                     145,266,269..270,273..275,278,305,309,359..360,364,368,
                     388,391..392,395..396,399)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340886"
     CDS             1..478
                     /gene="LOC107922506"
                     /coded_by="XM_041087492.1:298..1734"
                     /db_xref="GeneID:107922506"
ORIGIN      
        1 mlnyvdrgti asngvngslg tctssgtcts gsgiqgefnl nnfedgvlss afmvgllvas
       61 pifaslsksv npfrligvgl svwtlatagc gfsfnfwsit icrmlvgvge asfislaapf
      121 iddnapiaqk tawlaifymc iptgyalgyv ygglvgtyln wrfafwveai lmlpfavlgf
      181 vmkplnlkgf apaeskqali seetdvqevq dtdalndsak ptkekfshmf skmkctcidl
      241 nqfsrfikdm kallvdkvyv vnvlgycayn fvlgaysywg pkagykiyni sdadlifggi
      301 tivcgilgtl aggyvldlmk stipnafkll svttffgaif cftafcfqnm yaflaffsvg
      361 ellvfaiqgp vnyiclhcvn pslrplsmai stvsihifgd vpssplvgvl qdainnwret
      421 sliltsilfp aagiwftgif lhsvdrfned segqvtevdr snatpllepr vaetslfc
//
LOCUS       XP_016708070             432 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sphingolipid transporter spinster homolog 2 isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_016708070
VERSION     XP_016708070.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852581.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708070.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..432
                     /product="probable sphingolipid transporter spinster
                     homolog 2 isoform X5"
                     /calculated_mol_wt=47907
     Region          <61..376
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(64..65,67..69,72,92,95..96,99,220,223..224,227..229,
                     232,259,263,313..314,318,322,342,345..346,349..350,353)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..432
                     /gene="LOC107922506"
                     /coded_by="XM_016852581.2:164..1462"
                     /db_xref="GeneID:107922506"
ORIGIN      
        1 mefchlhlwl dflwllpylh ryqrvsihld llelaclygl wlqlvvafhs isgpsqsaaf
       61 gvgeasfisl aapfiddnap iaqktawlai fymciptgya lgyvygglvg tylnwrfafw
      121 veailmlpfa vlgfvmkpln lkgfapaesk qaliseetdv qevqdtdaln dsakptkekf
      181 shmfskmkct cidlnqfsrf ikdmkallvd kvyvvnvlgy caynfvlgay sywgpkagyk
      241 iynisdadli fggitivcgi lgtlaggyvl dlmkstipna fkllsvttff gaifcftafc
      301 fqnmyaflaf fsvgellvfa iqgpvnyicl hcvnpslrpl smaistvsih ifgdvpsspl
      361 vgvlqdainn wretslilts ilfpaagiwf tgiflhsvdr fnedsegqvt evdrsnatpl
      421 leprvaetsl fc
//
LOCUS       XP_016706650             286 aa            linear   PLN 06-AUG-2024
DEFINITION  soluble inorganic pyrophosphatase 6, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016706650
VERSION     XP_016706650.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706650.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..286
                     /product="soluble inorganic pyrophosphatase 6,
                     chloroplastic"
                     /calculated_mol_wt=31812
     Region          29..286
                     /region_name="PLN02707"
                     /note="Soluble inorganic pyrophosphatase"
                     /db_xref="CDD:178309"
     Site            order(99..100,171..172)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238239"
     Site            order(104,126,136,236..237)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238239"
     Site            order(106,159,164,191,196)
                     /site_type="metal-binding"
                     /note="metal binding sites [ion binding]"
                     /db_xref="CDD:238239"
     CDS             1..286
                     /gene="LOC107921287"
                     /coded_by="XM_016851161.2:150..1010"
                     /db_xref="GeneID:107921287"
ORIGIN      
        1 mapttiaaps scmllktpfs lkrgsktlsl nngrrlskrl fscnaiynpq vrikregqpe
       61 tlnyrvffed asgkkispwh dvplhlgngv fnfiveipke ssakmevatv elytpikqdt
      121 kkgklryypy ninwnygllp qtwedpsfan sevegafgdn dpvdvveigd srgkigeilk
      181 vkplaalami degeldwkiv aislddpras lvndvndvek hfpgtltair nwfrdykipd
      241 gkpankfglg nkaaskeyal kviketnesw aklvkrsipa gdlslv
//
LOCUS       XP_016708120             544 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein S-acyltransferase 23 [Gossypium hirsutum].
ACCESSION   XP_016708120
VERSION     XP_016708120.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852631.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708120.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..544
                     /product="probable protein S-acyltransferase 23"
                     /calculated_mol_wt=60201
     Region          33..266
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(59,61,67..68,71..73,75..76,80,83,92,94,96,100..101,
                     104..106,108..109,113,116,125,127,129,133..134,137..139,
                     141)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          59..92
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          94..125
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          194..227
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          367..492
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..544
                     /gene="LOC107922549"
                     /coded_by="XM_016852631.2:166..1800"
                     /db_xref="GeneID:107922549"
ORIGIN      
        1 masseievvp sesepkttqq qnstqqiaii dvfsasaygd fdklrkfvee dgaslatpdg
       61 nsyyalqwaa lnnfsdiaqy iidhggnvna tdnnqqtalh waavkgsiav advllqngar
      121 veaadlngyr avhiaaqygq taflnhivak yhaeydapdn cgrsplhwaa fkgfsdtirl
      181 llfrdafqgk qdiegctplh waalrgnvea cmvlvhagtk qelwvkdkag ntplklasdk
      241 ghrqiallls kaeranskrl fdkihggkmg evgyapilfc viivliilfi nsvlatptlp
      301 kvtaivglwg wigvslgigs limfyrccsk dpgyikksrr ldgyedtedp llnielnnas
      361 vwtgnwdqlc ptckiirpvr skhcpickhc ieqfdhhcpw isncvgkrnk wdffvficmg
      421 tltsfigafv avqriwtaip alsagktwih lvidhhpgiv afllldalvl tsattltiiq
      481 atqiarnitt nevsnairyr ylhgpegrfr npynhgcrkn ctdffirgyt ddeiawpplq
      541 svas
//
LOCUS       XP_016707189             320 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH25 [Gossypium hirsutum].
ACCESSION   XP_016707189
VERSION     XP_016707189.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851700.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..320
                     /product="transcription factor bHLH25"
                     /calculated_mol_wt=35813
     Region          148..222
                     /region_name="bHLH_AtNAI1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein NAI1 and similar proteins;
                     cd11452"
                     /db_xref="CDD:381458"
     Site            order(153..154,157..158,160..161,165,182..183)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381458"
     Site            order(163..164,167,170..171,174,183..184,187..188,191,194,
                     197..198,201,204..205,207..208,211,214..215,218,221..222)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381458"
     CDS             1..320
                     /gene="LOC107921877"
                     /coded_by="XM_016851700.2:309..1271"
                     /db_xref="GeneID:107921877"
ORIGIN      
        1 meissmrelp efmsnpqgim edpnlfhqwh mnsldelsfl pvtaavdnyp dysgaigrpp
       61 kqlktncwgd scnasnleas vfspdalsfa asnhvinpmg ilkpkeeeaa ssksmepfps
      121 eilfsqnpfg tqnyvlkgch gskrlgisqt qdhimaerkr reklsqrfia lsaivpglkk
      181 mdkasvlgda ikylkqlqek vktleeqtrk ksmesvvfvk kshlsaadni ddfhqplpei
      241 earfcdksvl vrihcekrkg lpekimsele kshltvinsn tvtfgssald itivaqmdie
      301 fcmtvkdfvk klrsafeslm
//
LOCUS       XP_016707332             447 aa            linear   PLN 06-AUG-2024
DEFINITION  serine--tRNA ligase [Gossypium hirsutum].
ACCESSION   XP_016707332
VERSION     XP_016707332.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851843.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707332.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..447
                     /product="serine--tRNA ligase"
                     /calculated_mol_wt=51118
     Region          1..447
                     /region_name="PLN02678"
                     /note="seryl-tRNA synthetase"
                     /db_xref="CDD:215364"
     CDS             1..447
                     /gene="LOC107922018"
                     /coded_by="XM_016851843.2:150..1493"
                     /db_xref="GeneID:107922018"
ORIGIN      
        1 mldinlfree kghnpeiire slrrryanvq dvdaiidldk vyrqllyele nlrkefnkin
       61 kqvaqlkiak qdatetiakt eevkqkiaek dvevkdswav lksklekign lvhdsvpvsd
      121 deannavirt wgekrlepkl knhvelvell giadtkkgad vaggrgyylk gdgvrlnqal
      181 infgldflek rgytalqtpf fmrkdvmakc aqlaqfdeel ykvtgegddk yliataeqpl
      241 csyhvddwiq pselpiryag ysscfrkeag shgrdtlgif rvhqfekveq fcitspngne
      301 swdmheemik nsedfyqmlk lpyqvvvivs galndaaakk ydleawfpas qtyrelvscs
      361 nctdyqsrrl eirygqkknn eqvkqyvhll nstltatert iccilenyqk edgveipevl
      421 rpfmggksfl pfktkptaet kgkkska
//
LOCUS       XP_040943427             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943427
VERSION     XP_040943427.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087493.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46141
     CDS             1..423
                     /gene="LOC107922019"
                     /coded_by="XM_041087493.1:769..2040"
                     /db_xref="GeneID:107922019"
ORIGIN      
        1 miadpkscdv lfvfvlfaii sssnalvstp ypkaisdlke avvkglgfqa ddfkisgfdl
       61 rdalvghsva yefdieidnk vipfklledv nrweyvdlpi frveeparpg venglvehkr
      121 isdnglpvla pfqlagpmel wiqdakdmri slphdvdagv lkkvmladga vvtvkgarsv
      181 slrhpidlpl plnrthngfa sglmaiaehl rraccsqdap llslrivgpt sltvpsssnn
      241 klklkrlapg lvelssmskt ktmdalssid lqgeaatvlt pkhfstmwpf asingsnanl
      301 igferllssv ldskankkgy fkllkadvsa qtfvkigfgi ekklkegdgf nlegfpewrt
      361 kpeivsmhfe vlakvdgenv iperimqvnp vavedaiaph vlarnmtmss tpvvytpsnp
      421 ftl
//
LOCUS       XP_016707334             353 aa            linear   PLN 06-AUG-2024
DEFINITION  malate dehydrogenase 2, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016707334
VERSION     XP_016707334.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851845.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707334.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="malate dehydrogenase 2, peroxisomal"
                     /calculated_mol_wt=37108
     Region          21..346
                     /region_name="PLN00106"
                     /note="malate dehydrogenase"
                     /db_xref="CDD:215058"
     CDS             1..353
                     /gene="LOC107922020"
                     /coded_by="XM_016851845.2:437..1498"
                     /db_xref="GeneID:107922020"
ORIGIN      
        1 mefsseanqr iarlaahlqp qmeessilrr adcrakggsp gfkvailgaa ggigqplaml
       61 mkmnplvsvl hlydvvnspg vtadlshmdt gavvrgflgq pqlesaltgm dlviipagvp
      121 rkpgmtrddl fninagivkt lcegvakcsp naivnlisnp vnstvpiaae vfkkagtydp
      181 krllgvttld vvrantfvae vlgldprevn vpvvgghsgv tilpllsqvk ppssftpeet
      241 eyltnriqng gtevveakag agsatlsmay aavkfadacl rglrgdagvv ecafvasevt
      301 elpffatkvr lgrtgaeevy qlgplneyer vglekakeel agsiqkgiaf ikk
//
LOCUS       XP_016707834             996 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase 7 [Gossypium hirsutum].
ACCESSION   XP_016707834
VERSION     XP_016707834.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707834.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..996
                     /product="receptor-like protein kinase 7"
                     /calculated_mol_wt=109621
     Region          51..980
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          120..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..191
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          192..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          217..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          241..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          265..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..359
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..429
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          432..455
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          456..479
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          480..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          504..527
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          528..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..996
                     /gene="LOC107922351"
                     /coded_by="XM_016852345.2:412..3402"
                     /db_xref="GeneID:107922351"
ORIGIN      
        1 mplsiafpfs tlvflvnnhy samsvrrnsh qwppsvfiff lfifvissvk sdeveillkf
       61 ksaversnsn vfsswtqgks acnfsgvvcn sngfvteinl pqqqivgylp fdsicelqal
      121 ekidvgnnsf hgkisedlkk csglqyldwg cnafsgevpd lsslnglkfl nlnnsgfsgi
      181 fpwkslenlt eltflslgdn pfaatpfpme vlkleklywl yltncsitgq ipqgiqnlsl
      241 lqnlelsdns lsgpipagiv klsqlwqlel ynnslsgkip vgfgnltnlk yfdasmnrle
      301 gdlselrslk nlvslqllen qfsgevpaef gefkhlegls lyrnkltgql ppkigswsdl
      361 nfidvsenff tgpippdmck ngkmvdllll qnnfngtlpe syanckslvr lrvnnnslsg
      421 tvpagiwslp nlliidltmn rfegpvagdi gnakslaqlf lannqfsgel pasisqatsl
      481 vsiqltsnkf sgqipatige lkrlgslyln gnmfsgvipd slgscgslnd vnlagnslsg
      541 kipesigslr nlnslnlsen klsghipttl spsilslldl snnrlvgpip kslsiqafkd
      601 cfkgnpglcs sdlddfqpcs sspgtsshlr tflscfiaga lvllvslgcy mfikvrksnl
      661 dhplkqgswn mkpyrmlsft ekdiidaiks enligkggsg nvykveledg kelavkhiwt
      721 sdsgnhknyh sstamltqrn srnsgsleyd aevaalsair hvnvvklycs itsedsnllv
      781 yeylpngslw drlhschkme lnwkmryaia igaakgleyl hhgcdrpvih rdvkssnill
      841 deewkpriad fglakivqng sggdwthvia gthgymapey aytckineks dvysfgvvlm
      901 elvtgkrpve pefgenkdiv ywiynklktk etlvealdpk ismaskedai kvlriavhct
      961 akipalrpsm rkvvqmleea epckltdiiv hgkgek
//
LOCUS       XP_040943428              98 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione S-transferase F9 [Gossypium hirsutum].
ACCESSION   XP_040943428
VERSION     XP_040943428.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087494.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..98
                     /product="glutathione S-transferase F9"
                     /calculated_mol_wt=11267
     Region          <1..94
                     /region_name="PLN02395"
                     /note="glutathione S-transferase"
                     /db_xref="CDD:166036"
     CDS             1..98
                     /gene="LOC121213966"
                     /coded_by="XM_041087494.1:30..326"
                     /db_xref="GeneID:121213966"
ORIGIN      
        1 mfaskmgfpp denlikesee klgkvldiye erlsknkyla gdffslvdls hlpftqylvg
       61 qmgkeymtts rkhvsawwdd issrpsrqkv lqlyapsf
//
LOCUS       XP_016706640             305 aa            linear   PLN 06-AUG-2024
DEFINITION  branched-chain amino acid aminotransferase 2, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016706640
VERSION     XP_016706640.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851151.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706640.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..305
                     /product="branched-chain amino acid aminotransferase 2,
                     chloroplastic"
                     /calculated_mol_wt=33128
     Region          2..305
                     /region_name="PLN03117"
                     /note="Branched-chain-amino-acid aminotransferase;
                     Provisional"
                     /db_xref="CDD:178664"
     CDS             1..305
                     /gene="LOC107921278"
                     /coded_by="XM_016851151.2:251..1168"
                     /db_xref="GeneID:107921278"
ORIGIN      
        1 mfcngtltrf gniqmcpssg ilnygqglfe glkayrkede gillfrteen alrmkvgadr
       61 mcmpsptvdq fidavkktvl ankrwvpphg rgslyirpll mgtgrnlevk psseytflvy
      121 aspvgnglkg vlnlmvednv hratpggtgg ikavtnyspi ykplteakak gfsdllylda
      181 ltgsnieecs gcnifilkgn vistptthgt ilpgitrksi meiasgfgyq veeraipike
      241 vfdaeevfct gtamivksva sityqgkrie yklgaetlaq klhatltgiq tgviedklgw
      301 tmvid
//
LOCUS       XP_040943429             305 aa            linear   PLN 06-AUG-2024
DEFINITION  branched-chain amino acid aminotransferase 2, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040943429
VERSION     XP_040943429.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087495.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..305
                     /product="branched-chain amino acid aminotransferase 2,
                     chloroplastic"
                     /calculated_mol_wt=33128
     Region          2..305
                     /region_name="PLN03117"
                     /note="Branched-chain-amino-acid aminotransferase;
                     Provisional"
                     /db_xref="CDD:178664"
     CDS             1..305
                     /gene="LOC107921278"
                     /coded_by="XM_041087495.1:233..1150"
                     /db_xref="GeneID:107921278"
ORIGIN      
        1 mfcngtltrf gniqmcpssg ilnygqglfe glkayrkede gillfrteen alrmkvgadr
       61 mcmpsptvdq fidavkktvl ankrwvpphg rgslyirpll mgtgrnlevk psseytflvy
      121 aspvgnglkg vlnlmvednv hratpggtgg ikavtnyspi ykplteakak gfsdllylda
      181 ltgsnieecs gcnifilkgn vistptthgt ilpgitrksi meiasgfgyq veeraipike
      241 vfdaeevfct gtamivksva sityqgkrie yklgaetlaq klhatltgiq tgviedklgw
      301 tmvid
//
LOCUS       XP_040943430             391 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943430
VERSION     XP_040943430.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087496.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..391
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45381
     Region          171..330
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..391
                     /gene="LOC121213968"
                     /coded_by="XM_041087496.1:411..1586"
                     /db_xref="GeneID:121213968"
ORIGIN      
        1 mdrnqnqmai agvvasvlaf galwikklet rkeiasrprv nrdyerenyi nsilysgdqh
       61 cidiirmrpi affnlcdils tnnllqssks vdireqvvif lhiighnvrf rvigsryyrs
      121 iqtvhhyfrv vlrailklyr lvirlpdest pseirnnprf ypyfkdciga ldgthirasv
      181 plsmqgrfrs rkegmtqnvl atitfdlkfa yvlagwegsa hdsrilsdal srprglripe
      241 gkyyladagy girigcitpy rgvryhlkef daegpenake lfnlrhsslr itvervfgil
      301 kkrfrvldae pfwnfqtqvd ivlacciihn himgvdpndl lnqglyeese fdsiiqtlte
      361 reerqearew sakrdkiaet mwtdymarni r
//
LOCUS       XP_040943431             406 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: DUF21 domain-containing protein At2g14520
            [Gossypium hirsutum].
ACCESSION   XP_040943431
VERSION     XP_040943431.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087497.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..406
                     /product="LOW QUALITY PROTEIN: DUF21 domain-containing
                     protein At2g14520"
                     /calculated_mol_wt=44708
     Region          <77..>288
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
     CDS             1..406
                     /gene="LOC107921363"
                     /coded_by="XM_041087497.1:172..1392"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:107921363"
ORIGIN      
        1 mavevrccgt dfiihiliiv llvlfagmms gltlglmsls lvdlevlaks gtxllcnaaa
       61 mealpiflds lvtawgaili svtlilvfge iipqavcsry glaigatvap ivqvlvwicf
      121 pvaypiskll dfllghrhva lfxraelktl vnlhgneagk ggelthdett iipgalelte
      181 ktakdamtnp tmtpisetfa idinakfdre lmslvlekgh srapvyyeqp tniigvilvk
      241 nlltihpede vpvkrvtirr ipriqealpl ydilnefqkg hshmavivrr cdkteqspst
      301 nsakgplpev kvdfdgekhp resalrrkhs fkkwkslpvt snslksgsrr rkwtkglnsd
      361 ilhlngnplp thseeeavgi itmedvieel lqeeifdetd hhyddw
//
LOCUS       XP_016707706             424 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 13 [Gossypium hirsutum].
ACCESSION   XP_016707706
VERSION     XP_016707706.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852217.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707706.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..424
                     /product="protein trichome birefringence-like 13"
                     /calculated_mol_wt=48133
     Region          81..127
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          128..416
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..424
                     /gene="LOC107922271"
                     /coded_by="XM_016852217.2:1..1275"
                     /db_xref="GeneID:107922271"
ORIGIN      
        1 matanmlssl fplfslvcfi sifcllslsk kasisssspt yphfhlvkpt mvtgniepna
       61 tsgsnpytss ssscdysdgs wihdpdvrld rydssckeif kgwncilnkk sngrdivkwr
      121 wkprnchlpp fdplkflhty rdtnigfvgd slnrnmfvsl fcalrrvagd vkkwrpsgad
      181 rgftflhynl tiayhrtnll arygswsans nggkledlgy kegyrvdvdi pegtwekapg
      241 fhdilifntg hwwwapskfd pikspmlffe rglplippip pdvgfdkvlk htirfvektm
      301 rpsaiklfrt qsprhfeggd wdqggscqrl qplspkevee lfsltkngtn vearlvnlhl
      361 ykslkgsnfh ildithmsef radahpsttg gkkhddcmhw clpgitdtwn dlfvthlnsl
      421 kirn
//
LOCUS       XP_040943432             387 aa            linear   PLN 06-AUG-2024
DEFINITION  branched-chain-amino-acid aminotransferase 6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943432
VERSION     XP_040943432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087498.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..387
                     /product="branched-chain-amino-acid aminotransferase 6
                     isoform X1"
                     /calculated_mol_wt=42856
     Region          48..387
                     /region_name="PLN03117"
                     /note="Branched-chain-amino-acid aminotransferase;
                     Provisional"
                     /db_xref="CDD:178664"
     CDS             1..387
                     /gene="LOC107922272"
                     /coded_by="XM_041087498.1:67..1230"
                     /db_xref="GeneID:107922272"
ORIGIN      
        1 mfmfsrsicc aklnqlstfe tlfsnlklrp yatpligplq tcesriysre kaeyanvnwd
       61 elgfaltktd ymyvmnftee eqkffngtlt rfgniemcps sgilnygqgl feglkayrke
      121 degillfrpq enalrmkmga drmcmpsptv dqfidavkkt vlankrwvpp ygrgslyvrp
      181 llmatgrnlg vkpssdytfl vyaspvgnyh kgdlnlmved nvhraipggt ggikavtnys
      241 pvykplteak akgfsdllfl daltgsniee gsacnifilk gnvistptth gtilpgitrk
      301 simeiasdfg yqveeraiqi kevfdaeevf ctgtamvvks vasityqgkr igyklgaetl
      361 aqklhatltg iqtgliedkl gwttlid
//
LOCUS       XP_040943433             386 aa            linear   PLN 06-AUG-2024
DEFINITION  branched-chain-amino-acid aminotransferase 6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943433
VERSION     XP_040943433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087499.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..386
                     /product="branched-chain-amino-acid aminotransferase 6
                     isoform X2"
                     /calculated_mol_wt=42769
     Region          34..386
                     /region_name="PLN03117"
                     /note="Branched-chain-amino-acid aminotransferase;
                     Provisional"
                     /db_xref="CDD:178664"
     CDS             1..386
                     /gene="LOC107922272"
                     /coded_by="XM_041087499.1:60..1220"
                     /db_xref="GeneID:107922272"
ORIGIN      
        1 mfmfsrsicc aklnqlstfe tlfsnlklrp yatpligplq tcesriyrek aeyanvnwde
       61 lgfaltktdy myvmnfteee qkffngtltr fgniemcpss gilnygqglf eglkayrked
      121 egillfrpqe nalrmkmgad rmcmpsptvd qfidavkktv lankrwvppy grgslyvrpl
      181 lmatgrnlgv kpssdytflv yaspvgnyhk gdlnlmvedn vhraipggtg gikavtnysp
      241 vykplteaka kgfsdllfld altgsnieeg sacnifilkg nvistptthg tilpgitrks
      301 imeiasdfgy qveeraiqik evfdaeevfc tgtamvvksv asityqgkri gyklgaetla
      361 qklhatltgi qtgliedklg wttlid
//
LOCUS       XP_040943434             351 aa            linear   PLN 06-AUG-2024
DEFINITION  branched-chain-amino-acid aminotransferase 6 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943434
VERSION     XP_040943434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087500.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..351
                     /product="branched-chain-amino-acid aminotransferase 6
                     isoform X3"
                     /calculated_mol_wt=38673
     Region          17..351
                     /region_name="PLN03117"
                     /note="Branched-chain-amino-acid aminotransferase;
                     Provisional"
                     /db_xref="CDD:178664"
     CDS             1..351
                     /gene="LOC107922272"
                     /coded_by="XM_041087500.1:198..1253"
                     /db_xref="GeneID:107922272"
ORIGIN      
        1 mgslskqeqv ecrekaeyan vnwdelgfal tktdymyvmn fteeeqkffn gtltrfgnie
       61 mcpssgilny gqglfeglka yrkedegill frpqenalrm kmgadrmcmp sptvdqfida
      121 vkktvlankr wvppygrgsl yvrpllmatg rnlgvkpssd ytflvyaspv gnyhkgdlnl
      181 mvednvhrai pggtggikav tnyspvykpl teakakgfsd llfldaltgs nieegsacni
      241 filkgnvist ptthgtilpg itrksimeia sdfgyqveer aiqikevfda eevfctgtam
      301 vvksvasity qgkrigyklg aetlaqklha tltgiqtgli edklgwttli d
//
LOCUS       XP_040943435             350 aa            linear   PLN 06-AUG-2024
DEFINITION  branched-chain-amino-acid aminotransferase 6 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943435
VERSION     XP_040943435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087501.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="branched-chain-amino-acid aminotransferase 6
                     isoform X4"
                     /calculated_mol_wt=38599
     Region          16..350
                     /region_name="PLN03117"
                     /note="Branched-chain-amino-acid aminotransferase;
                     Provisional"
                     /db_xref="CDD:178664"
     CDS             1..350
                     /gene="LOC107922272"
                     /coded_by="XM_041087501.1:107..1159"
                     /db_xref="GeneID:107922272"
ORIGIN      
        1 mgslskqeqv ewekaeyanv nwdelgfalt ktdymyvmnf teeeqkffng tltrfgniem
       61 cpssgilnyg qglfeglkay rkedegillf rpqenalrmk mgadrmcmps ptvdqfidav
      121 kktvlankrw vppygrgsly vrpllmatgr nlgvkpssdy tflvyaspvg nyhkgdlnlm
      181 vednvhraip ggtggikavt nyspvykplt eakakgfsdl lfldaltgsn ieegsacnif
      241 ilkgnvistp tthgtilpgi trksimeias dfgyqveera iqikevfdae evfctgtamv
      301 vksvasityq gkrigyklga etlaqklhat ltgiqtglie dklgwttlid
//
LOCUS       XP_040943436             262 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pectin methylesterase CGR3 [Gossypium hirsutum].
ACCESSION   XP_040943436
VERSION     XP_040943436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087502.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="probable pectin methylesterase CGR3"
                     /calculated_mol_wt=28728
     Region          <141..184
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     CDS             1..262
                     /gene="LOC107921524"
                     /coded_by="XM_041087502.1:1265..2053"
                     /db_xref="GeneID:107921524"
ORIGIN      
        1 msrrpvnpar rfadggsipf vgsvqsktrs spflsigllv vgailligyl hygsggsttv
       61 kealskvegg ssctlevqra lpvlkkaygd smhkvlhvgp dtcsvvskll keddtqawgv
      121 epydlddada gckslvhkgi vrvadikfpl pyraksfslv ivsdaldyls prylnrtlpe
      181 larvssdgvi ifsgylgqqr akvtelskfg rpakyrsstw wiryfvetkl eeneaaankf
      241 eqastkrsyk pacqvfhlrs lh
//
LOCUS       XP_040943437             262 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pectin methylesterase CGR3 [Gossypium hirsutum].
ACCESSION   XP_040943437
VERSION     XP_040943437.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087503.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="probable pectin methylesterase CGR3"
                     /calculated_mol_wt=28728
     Region          <141..184
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     CDS             1..262
                     /gene="LOC107921524"
                     /coded_by="XM_041087503.1:359..1147"
                     /db_xref="GeneID:107921524"
ORIGIN      
        1 msrrpvnpar rfadggsipf vgsvqsktrs spflsigllv vgailligyl hygsggsttv
       61 kealskvegg ssctlevqra lpvlkkaygd smhkvlhvgp dtcsvvskll keddtqawgv
      121 epydlddada gckslvhkgi vrvadikfpl pyraksfslv ivsdaldyls prylnrtlpe
      181 larvssdgvi ifsgylgqqr akvtelskfg rpakyrsstw wiryfvetkl eeneaaankf
      241 eqastkrsyk pacqvfhlrs lh
//
LOCUS       XP_016707153             163 aa            linear   PLN 06-AUG-2024
DEFINITION  basic form of pathogenesis-related protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707153
VERSION     XP_016707153.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851664.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707153.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="basic form of pathogenesis-related protein 1"
                     /calculated_mol_wt=17974
     Region          29..163
                     /region_name="CAP_PR-1"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     cd05381"
                     /db_xref="CDD:349400"
     CDS             1..163
                     /gene="LOC107921823"
                     /coded_by="XM_016851664.2:228..719"
                     /db_xref="GeneID:107921823"
ORIGIN      
        1 mkvwftklss aicfmtlcls hfseaqnspq dfvnahnvir aavgvgplvw nrtvasyaqk
       61 yadkrmkdce mehsygpyge nlaegygnld gvdavkmwas ekpdydhssn scvssgddcl
      121 hytqivwsks vhlgcgrakc angwvfvics ydpvgnvege rpy
//
LOCUS       XP_016707208             159 aa            linear   PLN 06-AUG-2024
DEFINITION  basic form of pathogenesis-related protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707208
VERSION     XP_016707208.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851719.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707208.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="basic form of pathogenesis-related protein 1"
                     /calculated_mol_wt=17382
     Region          28..159
                     /region_name="CAP_PR-1"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain of
                     pathogenesis-related protein 1 (PR-1) family proteins;
                     cd05381"
                     /db_xref="CDD:349400"
     CDS             1..159
                     /gene="LOC107921901"
                     /coded_by="XM_016851719.2:20..499"
                     /db_xref="GeneID:107921901"
ORIGIN      
        1 mgtqfsvaic lmaftlayvs laqnpsnedy lnvhnaarak vgvgpmtwda tvaayaqqya
       61 skriadcdli hstgpygenl aeasyalsga eavtlwvder phynydanqc vggeclhytq
      121 vvwrnstrlg carvkcnsgw wfvtcnydpp gnivgerpy
//
LOCUS       XP_040943438             182 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943438
VERSION     XP_040943438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087504.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="protein ARABIDILLO 1 isoform X1"
                     /calculated_mol_wt=19882
     CDS             1..182
                     /gene="LOC107921101"
                     /coded_by="XM_041087504.1:2037..2585"
                     /db_xref="GeneID:107921101"
ORIGIN      
        1 mvrpwylfdf qdvhetaaga lwnlafyrdn alriiqddgv qslvhlcsss nskmarfmaa
       61 lalvymfdgr idsvvpvgps pssqgssksl nidgvgrmal khveefvssf yepqtfnaaa
      121 atlvptalaq iveairipet ghlrcsmesq evidaelsar vlqlinvtds glhsqflhlq
      181 sl
//
LOCUS       XP_016706459             182 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706459
VERSION     XP_016706459.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850970.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706459.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="protein ARABIDILLO 1 isoform X1"
                     /calculated_mol_wt=19882
     CDS             1..182
                     /gene="LOC107921101"
                     /coded_by="XM_016850970.2:2019..2567"
                     /db_xref="GeneID:107921101"
ORIGIN      
        1 mvrpwylfdf qdvhetaaga lwnlafyrdn alriiqddgv qslvhlcsss nskmarfmaa
       61 lalvymfdgr idsvvpvgps pssqgssksl nidgvgrmal khveefvssf yepqtfnaaa
      121 atlvptalaq iveairipet ghlrcsmesq evidaelsar vlqlinvtds glhsqflhlq
      181 sl
//
LOCUS       XP_040943439             129 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ARABIDILLO 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943439
VERSION     XP_040943439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087505.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..129
                     /product="protein ARABIDILLO 1 isoform X2"
                     /calculated_mol_wt=13800
     CDS             1..129
                     /gene="LOC107921101"
                     /coded_by="XM_041087505.1:630..1019"
                     /db_xref="GeneID:107921101"
ORIGIN      
        1 marfmaalal vymfdgrids vvpvgpspss qgsskslnid gvgrmalkhv eefvssfyep
       61 qtfnaaaatl vptalaqive airipetghl rcsmesqevi daelsarvlq linvtdsglh
      121 sqflhlqsl
//
LOCUS       XP_016706474             816 aa            linear   PLN 06-AUG-2024
DEFINITION  potassium transporter 5 [Gossypium hirsutum].
ACCESSION   XP_016706474
VERSION     XP_016706474.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850985.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706474.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..816
                     /product="potassium transporter 5"
                     /calculated_mol_wt=91091
     Region          2..814
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..816
                     /gene="LOC107921113"
                     /coded_by="XM_016850985.2:29..2479"
                     /db_xref="GeneID:107921113"
ORIGIN      
        1 meenkpgmae nvekgeeiem avaeadknrl kerkfswakl rrvdslnlea grlsfsstks
       61 phskvdwirt lslafqsigv iygdigtspl yvyastftdg ighqdnliav lsliiysivl
      121 ipffkyaflv lrandngegg tfalysllcr hvklsllpnq qpedrelsny qldtpssqln
      181 raykirgkme nslkakltif vvtilatsmv igdgvltpsi silsavggid slgqdavvgi
      241 svvilvilfc vqrfgtdkvg ysfapiiclw ftllsgigly nlftygwgvl rafnplyivd
      301 yfkrrgkdgw islggvvlci tgteamfadl ghfnvravqi sfstitlpal ltvysgqaay
      361 ltkhpehvgd tfyksipdpi ywptfvvava asiiasqami sgafsiisqs ltlgcfprvt
      421 vvhtsteyeg qvyipevnym lmiacvavtv gfrttenigh aygiavvavm vittcmvtli
      481 mlviwktnil wialfcvffg tietiylssv lykfveggyl plafslilmt imgiwhyvhq
      541 kryefelnnk vskeyikqlv edprinrvpg igllyselvq gippifphfi ssipsihsvl
      601 vfvsikklpi skvtleerfl frhvepreyr mfrcvvrygy kdfmgtpvef eqqlveklke
      661 firheyfmae geaaavensp qssnilanqg kdkgssrrav fveetlnqln qshrssasiq
      721 sfnvaksnns ssgiisaapp ilgaeeeiqf vqkakdegii yllgeaevma kpnssytkrm
      781 ivdygynflr rnfsqgekvm mipqtrllrv gmayei
//
LOCUS       XP_016706383             105 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706383
VERSION     XP_016706383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850894.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=11912
     Region          <34..>86
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..105
                     /gene="LOC107921044"
                     /coded_by="XM_016850894.2:432..749"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rphdrvplqe mkadwhacln nrvgfkdlia ngieagtiqc grpke
//
LOCUS       XP_016706384             105 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706384
VERSION     XP_016706384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850895.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=11912
     Region          <34..>86
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..105
                     /gene="LOC107921044"
                     /coded_by="XM_016850895.2:717..1034"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rphdrvplqe mkadwhacln nrvgfkdlia ngieagtiqc grpke
//
LOCUS       XP_016706385             105 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706385
VERSION     XP_016706385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850896.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=11912
     Region          <34..>86
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..105
                     /gene="LOC107921044"
                     /coded_by="XM_016850896.2:496..813"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rphdrvplqe mkadwhacln nrvgfkdlia ngieagtiqc grpke
//
LOCUS       XP_040943440             105 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943440
VERSION     XP_040943440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087506.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=11912
     Region          <34..>86
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..105
                     /gene="LOC107921044"
                     /coded_by="XM_041087506.1:509..826"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rphdrvplqe mkadwhacln nrvgfkdlia ngieagtiqc grpke
//
LOCUS       XP_016706386             105 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706386
VERSION     XP_016706386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850897.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=11912
     Region          <34..>86
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..105
                     /gene="LOC107921044"
                     /coded_by="XM_016850897.2:193..510"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rphdrvplqe mkadwhacln nrvgfkdlia ngieagtiqc grpke
//
LOCUS       XP_040943441             105 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943441
VERSION     XP_040943441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087507.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=11912
     Region          <34..>86
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..105
                     /gene="LOC107921044"
                     /coded_by="XM_041087507.1:257..574"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rphdrvplqe mkadwhacln nrvgfkdlia ngieagtiqc grpke
//
LOCUS       XP_040943442              84 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase, cytoplasmic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943442
VERSION     XP_040943442.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087508.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..84
                     /product="aconitate hydratase, cytoplasmic isoform X2"
                     /calculated_mol_wt=9697
     Region          <34..>75
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..84
                     /gene="LOC107921044"
                     /coded_by="XM_041087508.1:432..686"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rnesrlacll kqqswiqgsd sqwh
//
LOCUS       XP_016706387              84 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase, cytoplasmic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706387
VERSION     XP_016706387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..84
                     /product="aconitate hydratase, cytoplasmic isoform X2"
                     /calculated_mol_wt=9697
     Region          <34..>75
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..84
                     /gene="LOC107921044"
                     /coded_by="XM_016850898.2:748..1002"
                     /db_xref="GeneID:107921044"
ORIGIN      
        1 mdrklgiggh lmanslhlqr liilrylfle lctkpqiekv ysfylelkle dvepcisgpk
       61 rnesrlacll kqqswiqgsd sqwh
//
LOCUS       XP_016706399             816 aa            linear   PLN 06-AUG-2024
DEFINITION  potassium transporter 5 [Gossypium hirsutum].
ACCESSION   XP_016706399
VERSION     XP_016706399.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850910.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706399.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..816
                     /product="potassium transporter 5"
                     /calculated_mol_wt=91163
     Region          39..814
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..816
                     /gene="LOC107921055"
                     /coded_by="XM_016850910.2:58..2508"
                     /db_xref="GeneID:107921055"
ORIGIN      
        1 meenkacmae nvekgeeiem aaaeadknrl terkfswakl rrvdslnlea grlsfsstks
       61 phskvdwmrt lslafqsigv iygdigtspl yvyastftdg ighqdnliav lsliiysivl
      121 ipffkyaflv lrandngegg tfalysllcr hvklsllpnq qpedrelsny qldtpssqln
      181 raykirgkme nslkaklaif vvtilatsmv igdgvltpsi svlsavggid slgqdavvgi
      241 svvilvilfc vqrfgtdklg ysfapiiclw ftllsgsgly nlftygwgvl rafnplyivg
      301 yfkrrgkngw islgevvlci tgteamfadl ghfsvravqi sfstitlpsl ltvycgqaay
      361 ltkhpehvgd tfyksipdpl ywptfvvava asiiasqami sgafsiisqs ltlgcfprvk
      421 vvhtsteyeg qvyipevnym lmiacvavtv gfrtavnigh aygiavvavm vittcmvtli
      481 mlviwktnil wialfcvffg tietiylssv lykfveggyl plvfslilmt imgiwhyvhq
      541 kryefelnnk vskeyikqlv edpkinrapg igllyselvq gippifphfi ssipsihsvl
      601 vfvsikklpi skvkpeerfl frhvepreyr mfrcvvrygy kdfmgtpvef eqqlveklke
      661 firheyfmae geavavensp qssnilvnqg kdkgssrrav fveetlnqln qsrrssasiq
      721 sfnmaksnns ssgivspapp ilgaeeeiqf vqkakdegii yllgeaevma kpnssytkrm
      781 vvdygynflr rnfrqgekvm mipqtkllrv gmtyei
//
LOCUS       XP_016706400             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706400
VERSION     XP_016706400.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706400.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..107
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11158
     Region          3..>59
                     /region_name="NOPCHAP1"
                     /note="NOP protein chaperone 1; pfam15370"
                     /db_xref="CDD:405951"
     CDS             1..107
                     /gene="LOC107921056"
                     /coded_by="XM_016850911.2:135..458"
                     /db_xref="GeneID:107921056"
ORIGIN      
        1 mlilgkvkdf lgvmaeankr leldaknnsq aydievlngn dseviemdlm lgvadlhipq
       61 alaaaesaia gnqppimvag sssssetesd dssdeesddd gmqfgak
//
LOCUS       XP_016706593             196 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706593
VERSION     XP_016706593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851104.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..196
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21075
     Region          56..>112
                     /region_name="NOPCHAP1"
                     /note="NOP protein chaperone 1; pfam15370"
                     /db_xref="CDD:405951"
     CDS             1..196
                     /gene="LOC107921226"
                     /coded_by="XM_016851104.2:102..692"
                     /db_xref="GeneID:107921226"
ORIGIN      
        1 mgssskdllr fehhkssssp lesallvckk kdsesqthep dpskkppftp fpksqvlgkv
       61 kdflgvmaea nkrleldakn nsqaydievl ngndseviem dlmlgvadlh tpqalaaaes
      121 aiagnqppim vagnsssset esddssdees dddgnddket scptehetsn tvkedavrea
      181 tgksrskkrt rivels
//
LOCUS       XP_016707181             295 aa            linear   PLN 06-AUG-2024
DEFINITION  probable xyloglucan endotransglucosylase/hydrolase protein 10
            [Gossypium hirsutum].
ACCESSION   XP_016707181
VERSION     XP_016707181.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851692.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..295
                     /product="probable xyloglucan
                     endotransglucosylase/hydrolase protein 10"
                     /calculated_mol_wt=34339
     Region          31..290
                     /region_name="GH16_XET"
                     /note="Xyloglucan endotransglycosylase, member of glycosyl
                     hydrolase family 16; cd02176"
                     /db_xref="CDD:185685"
     Site            order(40..41,62..63,93,95,97,107,109,111,124,126,136,138,
                     194,196,200..201)
                     /site_type="active"
                     /db_xref="CDD:185685"
     Site            order(107,109,111)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:185685"
     CDS             1..295
                     /gene="LOC107921857"
                     /coded_by="XM_016851692.2:315..1202"
                     /db_xref="GeneID:107921857"
ORIGIN      
        1 mnnclkcral visllilnvf qvsvasvvsi gdfnkdffvm wapdhvntss ngrerslkld
       61 qvsgsgfast qmflfgqidm qiklvpgnsa givlayylas dqpnrdeidf eflgnvsgqp
      121 yivqtniyvd gfdnreeriy lwfdptedfh tysilwnlhq ivfmidsipi rlyrnhadkg
      181 vayprwqpms iktslwngds watrggldki dwskspfias fknytidacv wkgnprfcra
      241 dssanwwnkr sfstltrvqk rwfkwvrkyh mvydycqdnq rfqnnlpkec flpky
//
LOCUS       XP_016707804             464 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707804
VERSION     XP_016707804.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707804.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..464
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49889
     Region          1..456
                     /region_name="DUF1005"
                     /note="Protein of unknown function (DUF1005); pfam06219"
                     /db_xref="CDD:461855"
     CDS             1..464
                     /gene="LOC107922328"
                     /coded_by="XM_016852315.2:174..1568"
                     /db_xref="GeneID:107922328"
ORIGIN      
        1 mdpcpfvril vgnlalrfpl stkpslsrih pstspcycki klknfphqvg siplihantq
       61 npescnfslq kslaacfsls ksqvdriisk ggssyklsie vyadpddstc glasgkllgk
      121 vtvpldlrga esrpsvahng widigrnksn kngssaqmfl tvrtepdprf vfqfggepec
      181 spqvfqvqgs vkqavftckf gfrsssdrnl gsrtslpesn tsrnwlpslk tdkdqsaker
      241 kgwsitvhdl sgspvamasm vtpfvpspgs drvsrsnpga wsilrpecgt wkpwgrleaw
      301 repgftdalg yrfdlfhddi vatgttttva sstlstklgg kftmdmttni stpsispqss
      361 cdlgsgsrpg srpgsgsgsd fgfglplspq siyrggfvml stvegvgkcs kpevevgvkh
      421 vtctedaaaf valaaamdls mdacqsfsqk lrkelrqqsq nfvd
//
LOCUS       XP_016708230             664 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartate--tRNA ligase, chloroplastic/mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016708230
VERSION     XP_016708230.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852741.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708230.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..664
                     /product="aspartate--tRNA ligase,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=74666
     Region          14..664
                     /region_name="PLN02903"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215490"
     CDS             1..664
                     /gene="LOC107922631"
                     /coded_by="XM_016852741.2:99..2093"
                     /db_xref="GeneID:107922631"
ORIGIN      
        1 msvllksfli lsfrarplav fpsilipksl prnrrtrtls svsastfqsp ppsvspetpt
       61 pipplsdslr wvsrtaycgd lsnqdvgsrv rlcgwvalhr vhggltffnl rdhtgivqit
      121 slpgefpdah eaikdlrley vvavdgfvrs rpsesvnkkm ktgsievaae hvqilnavrs
      181 klpllvtsad dandfvkeei rlryryldlr rqqmnfniml rhrvvklirr yledvhnfve
      241 ietpmlsrst pegardylvp sriqpgtfya lpqspqlfkq mlmvsgfdky yqiarcfrde
      301 dlradrqpef tqldmemafi pledmlrlne dlirkvflei kgvqlpnpfp rltyaeamdr
      361 ygsdrpdirf dlelknvsnv fldspfrlfa dtlknggiik ticvpsgakr fsntalkkgd
      421 vyneaiksga kglpflkvld dgevegipal vsslgptnre nflrkcsagp gdlilfavgh
      481 qtsvnrtldr lrvflahelg lvdhsrhsil wvtdfpmfew ndseqrlepl hhpftapnpe
      541 dmgdlssara laydmvydgv eigggslriy kreiqqkvle tigisleqae dkfgylleal
      601 dmgapphggi aygldrlvml ladansirdv iafpktstaq caltrapskv diqqlkdlsl
      661 qqaq
//
LOCUS       XP_016706755             616 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706755
VERSION     XP_016706755.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851266.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706755.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..616
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70600
     Region          68..149
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     Region          407..537
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..616
                     /gene="LOC107921412"
                     /coded_by="XM_016851266.2:169..2019"
                     /db_xref="GeneID:107921412"
ORIGIN      
        1 mpqvkwrgkg sylnqfefme athkrsnsdp lqkkvkknkl ntifepsnph keveqmkghv
       61 eakkietsnn evhnslkqei lrleerlqdq fvvrstleka lshkpftyda avenlipkaa
      121 kelikdiavl elevayleky llslyrqkfd ktflslksid enlkptsmah kemfqevqth
      181 dfmsgdlvst rnsignppke cddvwgaekl ldssiyrshs slsqrsaysv nspqravara
      241 eelyhslpls mleqaqmdts ngfslaehlg tsindhvtet snwlseemvk sisaiycela
      301 dpplinhdyl pspishsslv dvvtsegqgd tnmwspkcgk fssfnspfdn pfsigepkdf
      361 sgpyctmvkv qwihrdskkl qdiehklqyy rslvyqledv dvrrmkheek lafwinvhns
      421 lvmhafliyg ipknnlkrls lllkaaydvg getinidtiq ssilgcrlpr pgqwlrflfp
      481 sktkfkardp rraytiespe pllyfalssg sysdpavriy tpkgvfqele vakmeyiqan
      541 wsvnkeekil lpklmeyfak dsnvgpagll qmveqlmpds vrknlqpsck rktgksiewi
      601 shnfafrylf skellh
//
LOCUS       XP_016706756             616 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706756
VERSION     XP_016706756.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851267.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706756.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..616
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70600
     Region          68..149
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     Region          407..537
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..616
                     /gene="LOC107921412"
                     /coded_by="XM_016851267.2:158..2008"
                     /db_xref="GeneID:107921412"
ORIGIN      
        1 mpqvkwrgkg sylnqfefme athkrsnsdp lqkkvkknkl ntifepsnph keveqmkghv
       61 eakkietsnn evhnslkqei lrleerlqdq fvvrstleka lshkpftyda avenlipkaa
      121 kelikdiavl elevayleky llslyrqkfd ktflslksid enlkptsmah kemfqevqth
      181 dfmsgdlvst rnsignppke cddvwgaekl ldssiyrshs slsqrsaysv nspqravara
      241 eelyhslpls mleqaqmdts ngfslaehlg tsindhvtet snwlseemvk sisaiycela
      301 dpplinhdyl pspishsslv dvvtsegqgd tnmwspkcgk fssfnspfdn pfsigepkdf
      361 sgpyctmvkv qwihrdskkl qdiehklqyy rslvyqledv dvrrmkheek lafwinvhns
      421 lvmhafliyg ipknnlkrls lllkaaydvg getinidtiq ssilgcrlpr pgqwlrflfp
      481 sktkfkardp rraytiespe pllyfalssg sysdpavriy tpkgvfqele vakmeyiqan
      541 wsvnkeekil lpklmeyfak dsnvgpagll qmveqlmpds vrknlqpsck rktgksiewi
      601 shnfafrylf skellh
//
LOCUS       XP_016707587             493 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g15980 [Gossypium
            hirsutum].
ACCESSION   XP_016707587
VERSION     XP_016707587.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852098.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707587.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="pentatricopeptide repeat-containing protein
                     At2g15980"
                     /calculated_mol_wt=55617
     Region          <167..>491
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          201..241
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          249..276
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          282..311
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          317..344
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          352..381
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          387..415
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          422..451
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          457..481
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..493
                     /gene="LOC107922204"
                     /coded_by="XM_016852098.2:334..1815"
                     /db_xref="GeneID:107922204"
ORIGIN      
        1 matqilkthh vlsrtskepl iplyffsssa fpdttsppsd qpdpistvts ilthnrsksr
       61 wstvltlfps gftpfqfsqi tlqlknnphl alrfflftqh kslcnhdlss ystiihilsr
      121 arlktrarel irlairtpgi dnepthfklf ellvktynqc gsapfvfdll vksclqmkrl
      181 dgsieivrml msrrispqvc tcnalisevs kccgaskgye vykevfvvgn getesdvkrv
      241 skvrpnvhtf nalmlcfyre gllekvrevw cvmeslgcvp nsysysvlma afceegkvre
      301 aeylwaemkv kglepdivaf ntlidglcks geiiraeelf temelngika tcvtyenlin
      361 gyckaadins amliyrdmcr kdfrpqsltv ellirglcdk gmvlealeim kamrevgvcp
      421 tgisyellik glcvdgkmee alklqaemvg kgfklnleiy dafidgylrq gneemvtmlr
      481 kevlethkeq ggn
//
LOCUS       XP_016707588             305 aa            linear   PLN 06-AUG-2024
DEFINITION  plastid division protein PDV2 [Gossypium hirsutum].
ACCESSION   XP_016707588
VERSION     XP_016707588.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852099.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707588.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..305
                     /product="plastid division protein PDV2"
                     /calculated_mol_wt=33416
     CDS             1..305
                     /gene="LOC107922205"
                     /coded_by="XM_016852099.2:255..1172"
                     /db_xref="GeneID:107922205"
ORIGIN      
        1 meeegvglal aratelrlki sncitkatsg npvspykqsq egkqtdknas lngdkphqtl
       61 ggaddeeeae etterlldir daleslesql lalqnlqhqq syekevalae idysrrvvle
      121 klkeyqgkdm evileasafv sktvennsdl llppypsrlp rslvldngsl shlqstykss
      181 pngvsisdpt neaknpkqhq deskslrkgf syiigsavkm vlplvgviyi lslsnfvpnl
      241 gkgnrvkvfg tsqqrateek nssdpcppgk ilvmengear clvkerieip fesivskpdv
      301 nygcg
//
LOCUS       XP_016707904             177 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 5C1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707904
VERSION     XP_016707904.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852415.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707904.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="CASP-like protein 5C1 isoform X1"
                     /calculated_mol_wt=18828
     Region          31..161
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..177
                     /gene="LOC107922397"
                     /coded_by="XM_016852415.2:1885..2418"
                     /db_xref="GeneID:107922397"
ORIGIN      
        1 mclddefsgg mravqsaenf qnkmamegvp gslgtsvgfs lrigqtlfss asllfmslgv
       61 efysysafcy lvttmglvip wsctlavldg ysvvvkcpvr qpgilfiiaa gdwvlsvltl
      121 aaacstasvv dllfqtsssf ctpkccsryq lsaamafltw flslasalln lwllpss
//
LOCUS       XP_016707905             167 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 5C1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707905
VERSION     XP_016707905.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852416.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707905.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="CASP-like protein 5C1 isoform X2"
                     /calculated_mol_wt=17773
     Region          21..151
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..167
                     /gene="LOC107922397"
                     /coded_by="XM_016852416.2:1553..2056"
                     /db_xref="GeneID:107922397"
ORIGIN      
        1 mravqsaenf qnkmamegvp gslgtsvgfs lrigqtlfss asllfmslgv efysysafcy
       61 lvttmglvip wsctlavldg ysvvvkcpvr qpgilfiiaa gdwvlsvltl aaacstasvv
      121 dllfqtsssf ctpkccsryq lsaamafltw flslasalln lwllpss
//
LOCUS       XP_016707906             167 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 5C1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707906
VERSION     XP_016707906.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852417.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707906.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="CASP-like protein 5C1 isoform X2"
                     /calculated_mol_wt=17773
     Region          21..151
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..167
                     /gene="LOC107922397"
                     /coded_by="XM_016852417.2:194..697"
                     /db_xref="GeneID:107922397"
ORIGIN      
        1 mravqsaenf qnkmamegvp gslgtsvgfs lrigqtlfss asllfmslgv efysysafcy
       61 lvttmglvip wsctlavldg ysvvvkcpvr qpgilfiiaa gdwvlsvltl aaacstasvv
      121 dllfqtsssf ctpkccsryq lsaamafltw flslasalln lwllpss
//
LOCUS       XP_016707967             661 aa            linear   PLN 06-AUG-2024
DEFINITION  long chain acyl-CoA synthetase 2 [Gossypium hirsutum].
ACCESSION   XP_016707967
VERSION     XP_016707967.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707967.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..661
                     /product="long chain acyl-CoA synthetase 2"
                     /calculated_mol_wt=73896
     Region          1..660
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(226,229..234,236..237)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341250"
     Site            order(229,349..350,414..419,500,512,515,527,633)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341250"
     Site            order(229,274..275,320,322..323,326,349..350,414..419,500,
                     512,515,524..527,610)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     Site            order(274,322..323,326,349,524..526,608,610)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341250"
     CDS             1..661
                     /gene="LOC107922437"
                     /coded_by="XM_016852478.2:269..2254"
                     /db_xref="GeneID:107922437"
ORIGIN      
        1 msvtytvkve dsrpesgkkp sagpvyrciy akdglldlpd gmhspweffs esvkrnpnnr
       61 mlgrrqttds kqagpyvwit yqeaydaalr igsamrnqgv spgdrcgiyg sncpewiitm
      121 eacncqavty vplydtlgan avefivnhae vaiafvqenk lpailsclpa ccsylktivs
      181 fanvssiqkk eaeelgvslf swkefselgs ldcelpqkqk tdictimyts gttgepkgvi
      241 ltnkaimtev lsidqlieit dkacseedty fsflplahvy dqimetyfik rgssigfwqg
      301 dvrylmddvq elkptafcav prvydriytg ivnkiasggl irnklfqyay nyklrnmeng
      361 fpqdkaspll dklvfdkvrq alggkvrlml sgaaplprhv eeflrvsccs nlsqgyglte
      421 scggcftsla nvmsmigtvg vpittiearl esvpemgyda lssvprgeic lrgntlfsgy
      481 ykrqdltdev vidgwfhtgd igelqsdgsm kiidrkknif klsqgeyvav enientysrc
      541 plvasiwvyg nsfesflvav vvperkaled wgiengeatd fkslcenpka rkyilnelns
      601 tgqkhhlrgf ellkavylep npfdmerdlv tptfklkrpq llkyykdrid elysegkgak
      661 v
//
LOCUS       XP_040943443             661 aa            linear   PLN 06-AUG-2024
DEFINITION  long chain acyl-CoA synthetase 2 [Gossypium hirsutum].
ACCESSION   XP_040943443
VERSION     XP_040943443.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087509.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..661
                     /product="long chain acyl-CoA synthetase 2"
                     /calculated_mol_wt=73896
     Region          1..660
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(226,229..234,236..237)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341250"
     Site            order(229,349..350,414..419,500,512,515,527,633)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341250"
     Site            order(229,274..275,320,322..323,326,349..350,414..419,500,
                     512,515,524..527,610)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341250"
     Site            order(274,322..323,326,349,524..526,608,610)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341250"
     CDS             1..661
                     /gene="LOC107922437"
                     /coded_by="XM_041087509.1:202..2187"
                     /db_xref="GeneID:107922437"
ORIGIN      
        1 msvtytvkve dsrpesgkkp sagpvyrciy akdglldlpd gmhspweffs esvkrnpnnr
       61 mlgrrqttds kqagpyvwit yqeaydaalr igsamrnqgv spgdrcgiyg sncpewiitm
      121 eacncqavty vplydtlgan avefivnhae vaiafvqenk lpailsclpa ccsylktivs
      181 fanvssiqkk eaeelgvslf swkefselgs ldcelpqkqk tdictimyts gttgepkgvi
      241 ltnkaimtev lsidqlieit dkacseedty fsflplahvy dqimetyfik rgssigfwqg
      301 dvrylmddvq elkptafcav prvydriytg ivnkiasggl irnklfqyay nyklrnmeng
      361 fpqdkaspll dklvfdkvrq alggkvrlml sgaaplprhv eeflrvsccs nlsqgyglte
      421 scggcftsla nvmsmigtvg vpittiearl esvpemgyda lssvprgeic lrgntlfsgy
      481 ykrqdltdev vidgwfhtgd igelqsdgsm kiidrkknif klsqgeyvav enientysrc
      541 plvasiwvyg nsfesflvav vvperkaled wgiengeatd fkslcenpka rkyilnelns
      601 tgqkhhlrgf ellkavylep npfdmerdlv tptfklkrpq llkyykdrid elysegkgak
      661 v
//
LOCUS       XP_016708288             885 aa            linear   PLN 06-AUG-2024
DEFINITION  extra-large guanine nucleotide-binding protein 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708288
VERSION     XP_016708288.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852799.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708288.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..885
                     /product="extra-large guanine nucleotide-binding protein 1
                     isoform X1"
                     /calculated_mol_wt=99270
     Region          494..862
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(494..499,689,773..774,776,841..843)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            665
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            671..673
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            order(688..689,721..722)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            773..776
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            841..843
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..885
                     /gene="LOC107922668"
                     /coded_by="XM_016852799.2:432..3089"
                     /db_xref="GeneID:107922668"
ORIGIN      
        1 magilrkilh vgqssppkdd dnnveysfai eyngppvsfd ipsavpvdvd qlptaatvss
       61 syvlnnsisl pviqpvvntn kmkqnlarhk kigsglsnep siqvvsldsl gqtidgigsc
      121 gimqnshvhd sladdckqgl glhnkymdpp dsdatgsvls spsvsssgvf sqkredihnk
      181 etttrhvkrp svvtfrgpes cdmvqgesns nysetqstht aeqsierngk kgscyrcleg
      241 nrftekeici vcnakycckc vlramgsmpe grkcvtcigk kinesrrasl gkcsrllkql
      301 lnelevkqam ssektskanq lppqlvling eplnqyklhv lqtcqnppkk lkpgrywydk
      361 vsgfwgkegh gpcqiitaql nvggrikaka sngnakvlvn dreitrkelw mlqfagvnce
      421 gkpsfwlsad gyyqeegqkn ekgpiwkktr iklfcallsl pvppnvvnpa gedvsqrtle
      481 qqvllklllv gyqksgtsti ykqakilynv pfsederqni klkiqcnlyg ylaillegre
      541 rfeevllenr klqfadgpgs sggasqidsk tkyslsprlk afsewlvqvm vsgnlevifp
      601 aatreyapfi qelwndaafq atynrrhelq mlpriatyfl eraveisrtd yepsdmdily
      661 aegtqssngl ssmefsfptr eresfidgyq hdplaryqli rlhpsslges ckwvgmfedv
      721 nmvlfcvslt dydefwldsn gvlinkmvas kqlfetivsh ptleqkdfll ilnkadllle
      781 kmeevpltrc ewfhdfnpvi shhnnnltas vaqrafhyia vkfkrlfdsl thsklyvcmv
      841 tglepdsvdd afryareilk wdyndnsfis tefsttthie astts
//
LOCUS       XP_016708289             720 aa            linear   PLN 06-AUG-2024
DEFINITION  extra-large guanine nucleotide-binding protein 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016708289
VERSION     XP_016708289.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852800.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708289.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..720
                     /product="extra-large guanine nucleotide-binding protein 1
                     isoform X2"
                     /calculated_mol_wt=79838
     Region          494..>678
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            665
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            671..673
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     CDS             1..720
                     /gene="LOC107922668"
                     /coded_by="XM_016852800.2:435..2597"
                     /db_xref="GeneID:107922668"
ORIGIN      
        1 magilrkilh vgqssppkdd dnnveysfai eyngppvsfd ipsavpvdvd qlptaatvss
       61 syvlnnsisl pviqpvvntn kmkqnlarhk kigsglsnep siqvvsldsl gqtidgigsc
      121 gimqnshvhd sladdckqgl glhnkymdpp dsdatgsvls spsvsssgvf sqkredihnk
      181 etttrhvkrp svvtfrgpes cdmvqgesns nysetqstht aeqsierngk kgscyrcleg
      241 nrftekeici vcnakycckc vlramgsmpe grkcvtcigk kinesrrasl gkcsrllkql
      301 lnelevkqam ssektskanq lppqlvling eplnqyklhv lqtcqnppkk lkpgrywydk
      361 vsgfwgkegh gpcqiitaql nvggrikaka sngnakvlvn dreitrkelw mlqfagvnce
      421 gkpsfwlsad gyyqeegqkn ekgpiwkktr iklfcallsl pvppnvvnpa gedvsqrtle
      481 qqvllklllv gyqksgtsti ykqakilynv pfsederqni klkiqcnlyg ylaillegre
      541 rfeevllenr klqfadgpgs sggasqidsk tkyslsprlk afsewlvqvm vsgnlevifp
      601 aatreyapfi qelwndaafq atynrrhelq mlpriatyfl eraveisrtd yepsdmdily
      661 aegtqssngl ssmefsfptr eresfidgtn lldcipvalg kaasgweclk mstwsyfasp
//
LOCUS       XP_016707253            3828 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707253
VERSION     XP_016707253.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707253.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..3828
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=425924
     Region          630..1205
                     /region_name="SMG1"
                     /note="Serine/threonine-protein kinase smg-1; pfam15785"
                     /db_xref="CDD:464869"
     Region          1851..>1948
                     /region_name="FRB_dom"
                     /note="FKBP12-rapamycin binding domain; pfam08771"
                     /db_xref="CDD:462596"
     Region          2030..2335
                     /region_name="PIKKc_SMG1"
                     /note="Catalytic domain of Suppressor of Morphogenetic
                     effect on Genitalia-1; cd05170"
                     /db_xref="CDD:270714"
     Site            order(2040,2042..2044,2046,2062,2064,2067,2102,2114..2117,
                     2122,2248,2250,2261..2262)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270714"
     Site            2240..2248
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270714"
     Site            2262..2284
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270714"
     Region          <3768..3828
                     /region_name="TEL1"
                     /note="Phosphatidylinositol kinase or protein kinase, PI-3
                     family [Signal transduction mechanisms]; COG5032"
                     /db_xref="CDD:227365"
     Region          3799..3828
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3828
                     /gene="LOC107921970"
                     /coded_by="XM_016851764.2:139..11625"
                     /db_xref="GeneID:107921970"
ORIGIN      
        1 mmqglhhqqq qlaallsaal tkdttaaata svtsssstta sttlptttst ptvstksden
       61 dsarlaains lhraiiyppn silvahsasf laqgfsqlls dksyavrqsa aiayaalcav
      121 vcsvpigssg rqnhvmlssl vdrfigwalp llsnisagdg ttelaleglr eflsvgdvga
      181 ieryalpilk acqelleder tslsllhrll svltlillkf slsfqphfld iidlllgwal
      241 vpdlaesdrr vimdsflqfq khwvgnlqfs lgllskflgd mdvllqdgth gtpqqfrrll
      301 allscfstvl qstasgllem nlleqisepl skmlprllgc lsvvgkkfgw srwiedswkc
      361 ltllaeilqe rfstfyplai dilfqslelg ntsrpigagk itsfqvhgvl ktnlqllslq
      421 klgllpssvk kilhfdrais qlrlhpnhlv tgssaatyvf llqqgndeiv qqamtlltee
      481 lellkgmlkk klvhgeevns agdlrcyskl elfalikfdl kvlltsvslc gcnnlivqpk
      541 iaalylqrse slisfiiekl spfespiqfc velqvhvikt ldrlsmvkff skcsirnqsg
      601 nipvgdaate kvldgnslrd vhpaviieyl refgtllvra lhvsspvavk ivalewvqrf
      661 cenlisices pnmrynfyee fgyvslfgdl ifsileaafd repkvrlhvt lslelllqar
      721 lmhplyfnsv sdvvleklgd pdadirnayv rllshvlltt myvygihdig acsnsrpral
      781 mlgngsnlyw kqvfalkqlp qqlhsqqlvs ilsyisqrwk vplsswiqrl ihtcrsskds
      841 slgqleetgi vgandlwldi kmenilekfc svnnlagaww aiheaaryci strlrtnlgg
      901 ptqtfaaler mlldvshvlq ldgeqndgsl siigssgahl lpmrllldfv ealkknvyna
      961 yegsavlpsa grqsslffra nkkvceewfs ricepmmnag lalqchdati qyctlrlqel
     1021 knlvvsafke ksqaqvteyl hnmrekyigd isrivrhmsl alcrnhesea liglqkwvsl
     1081 tfsplllded qsvnhsgive pfqwitglvy qaegqyekav shfahllqte eslstmgsdg
     1141 aqfciariie sytavsdwks leswllelqt lrakyagksy sgalttagne mnaihalaqf
     1201 degdlqaawa yldltpksss eltldpklal qrseqmllqa llfkiegnld kvphelqkak
     1261 smleemlsvl pldglaeata cvtqlhcifa vgegydlsqg ncwkhmgsqg ksklnqsglg
     1321 syllplqpli kgihqdcnpw lkvlrvyrti sptspvtlkl smnlmslark qgnltlancl
     1381 inylrdhvss csherycnll nlnlqyegil ilhaenkied afaniwsflr pylcsssfiv
     1441 ndvddglmka kaclklsnwl rqnysslnlr nivlrmlsdl nvatvsssgt ggysfsdenl
     1501 sskwsldviv eeivgtatkl stqlcpkmak swisyaswcf nqakssvanq qekclqscsf
     1561 spilvseltp krfkmtedei qivesvilpl fqkrdsaehv ddgaeqwgfc sgsaenlrtn
     1621 nmlmtlvqql vdimeaaaga pgtensgger lsstlasqll sslqhanfgi eethltyvid
     1681 klidiwwslr rrrvslfgha ahafikylly sstklsdgrl sgdfcqsqkq kvgsytlrat
     1741 lyvmhvllny glelkdtlep alstvpllsw qditpqlfar lsshpeevvr kqiesllmml
     1801 aklspssivy pmlvdinaye ekpseelqhi lgclrelypr liqdvqlvin elgnvtvlwe
     1861 elwlstlqdl hmdvmrrinv lkeeaariae nttlsqsekn kinaakysam mapivvaler
     1921 rlastsrkpe tphelwfhhe ykeqlksaiv slktppasaa algdvwrpfd hiaaslasyq
     1981 rkssislgev apqlamlsss dvpmpglekq vapfesdral tsalhgivti asfsehltil
     2041 stktkpkklv ilgsdgkayt yllkgredlr ldarimqllq ainsflhsss atnhnllgir
     2101 yysvtpisgr agliqwvdnv isiysifksw qnrvqvtqvs algagsakss vppvprpsdm
     2161 fygkiipalk ekgirrvisr rdwphevkrk vlldlmkevp kqllhqelwc asegfkafns
     2221 klkrysgsva amsmvghilg lgdrhldnil ldfssgdvvh idynvcfdkg qrlkvpeivp
     2281 frltqtieaa lgltgiegtf ranceavvsv lrknkdlllm llevfvwdpl iewtrgdfhd
     2341 daaiggeerk gmelavslsl fasrvqeirv plqehhdlll atfpavesal erfrdvlnqy
     2401 elvsalfyra dqersnlilh etsaksivae atcnsekica sfeiqarefk qaknvvaeka
     2461 qqattwieqh grildalrgn lipeisagmn lsgmadalsl tsavpeagvp ltivpeptqa
     2521 qcydidrevs qliaeldrgl ssavmalqay slalqrvlpl nylttstvhg waqvlqlsan
     2581 avssdilsla rrqaseliak vhgdnlefmk sshddlcfkv ekyaaeiekv eeecaelvns
     2641 igskteskak drlmfafmky mqsaglvrke dansslqyge skydgtkasr iredleekkd
     2701 kvlsvlsvam rslyddvkhr ileiyshtnr aqiensrpqs dlgtvfsgfe eqvekcilva
     2761 gfvnelwqqi ggdmpgvdrd lyyskyyseg nwasifktil nccksligem tevvlpdimr
     2821 savsfntevm dafglisqir gsidtaleql vevelerasl aeleqnyfvk vgliteqqla
     2881 leeaamkgrd hlsweeaeel asqeeacraq leqlhqtwnh rdmrtsslik reaeiksslv
     2941 sceqhfqsli tgddfreshr sksqvllail vkpfselesv dkalsslsss faphsdeipn
     3001 lveflssghs vsecvwnfgs llnnhsffiw kigvldsild lcihdmassv dqnlgfeqlf
     3061 dvvkrkleiq lqeyigrylk iriapallsw ldkenehlkl ltegakepsn dhvrkdveav
     3121 kkvqlmleey cnthetaraa rsaasvmkrq vnelkealrk tileivqmew mhdvgltpsh
     3181 tsrvlfqkff snddelypvv lnfsrpklle tmqsvlskla raieglksce htsivaegql
     3241 eramgwacgg pnssvagnss akasgippef hdhlmrrrhl lqearekass vvkicmsile
     3301 feasrdgifq ipregyalst gsdsrtwqqa yfnaltklev tyhsftrieq ewklaqsnme
     3361 vassglysat nelciaslka ksasgdlqst vlamrdcaye asvalsafar vsrghtalts
     3421 esgsmleevl aitedlhdvh nlgkeaasvh rslmedlskq anaillples vlakdvsamt
     3481 eamareretk mevspihgqa iyqsyglrvr eacqtfkplv psltfsvkel hsllttlart
     3541 aslhagnlhk aleglgesqe vksqsislsr pdlasdatey derggesmst sgsgspkdlv
     3601 gltgiplqek ewisppdsig tsgtessits ngtslsdsin dpivemmeki sldssqkkdh
     3661 gdpnfvpsse seydeishcg hrmsenmevk ntnevksane etnenlktvp svndeavsap
     3721 lessqpsnnv nldvkfqgkd evstlgkiev gdeshevpvp stdtasriar gknayamsvl
     3781 rrvemkldgr diterreisi aeqvdyllkq atsvdnlcsm yegwtpwi
//
LOCUS       XP_016707254            3827 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707254
VERSION     XP_016707254.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851765.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707254.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3827
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..3827
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=425796
     Region          630..1205
                     /region_name="SMG1"
                     /note="Serine/threonine-protein kinase smg-1; pfam15785"
                     /db_xref="CDD:464869"
     Region          1851..>1948
                     /region_name="FRB_dom"
                     /note="FKBP12-rapamycin binding domain; pfam08771"
                     /db_xref="CDD:462596"
     Region          2030..2335
                     /region_name="PIKKc_SMG1"
                     /note="Catalytic domain of Suppressor of Morphogenetic
                     effect on Genitalia-1; cd05170"
                     /db_xref="CDD:270714"
     Site            order(2040,2042..2044,2046,2062,2064,2067,2102,2114..2117,
                     2122,2248,2250,2261..2262)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270714"
     Site            2240..2248
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270714"
     Site            2262..2284
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270714"
     Region          <3767..3827
                     /region_name="TEL1"
                     /note="Phosphatidylinositol kinase or protein kinase, PI-3
                     family [Signal transduction mechanisms]; COG5032"
                     /db_xref="CDD:227365"
     Region          3798..3827
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3827
                     /gene="LOC107921970"
                     /coded_by="XM_016851765.2:138..11621"
                     /db_xref="GeneID:107921970"
ORIGIN      
        1 mmqglhhqqq qlaallsaal tkdttaaata svtsssstta sttlptttst ptvstksden
       61 dsarlaains lhraiiyppn silvahsasf laqgfsqlls dksyavrqsa aiayaalcav
      121 vcsvpigssg rqnhvmlssl vdrfigwalp llsnisagdg ttelaleglr eflsvgdvga
      181 ieryalpilk acqelleder tslsllhrll svltlillkf slsfqphfld iidlllgwal
      241 vpdlaesdrr vimdsflqfq khwvgnlqfs lgllskflgd mdvllqdgth gtpqqfrrll
      301 allscfstvl qstasgllem nlleqisepl skmlprllgc lsvvgkkfgw srwiedswkc
      361 ltllaeilqe rfstfyplai dilfqslelg ntsrpigagk itsfqvhgvl ktnlqllslq
      421 klgllpssvk kilhfdrais qlrlhpnhlv tgssaatyvf llqqgndeiv qqamtlltee
      481 lellkgmlkk klvhgeevns agdlrcyskl elfalikfdl kvlltsvslc gcnnlivqpk
      541 iaalylqrse slisfiiekl spfespiqfc velqvhvikt ldrlsmvkff skcsirnqsg
      601 nipvgdaate kvldgnslrd vhpaviieyl refgtllvra lhvsspvavk ivalewvqrf
      661 cenlisices pnmrynfyee fgyvslfgdl ifsileaafd repkvrlhvt lslelllqar
      721 lmhplyfnsv sdvvleklgd pdadirnayv rllshvlltt myvygihdig acsnsrpral
      781 mlgngsnlyw kqvfalkqlp qqlhsqqlvs ilsyisqrwk vplsswiqrl ihtcrsskds
      841 slgqleetgi vgandlwldi kmenilekfc svnnlagaww aiheaaryci strlrtnlgg
      901 ptqtfaaler mlldvshvlq ldgeqndgsl siigssgahl lpmrllldfv ealkknvyna
      961 yegsavlpsa grqsslffra nkkvceewfs ricepmmnag lalqchdati qyctlrlqel
     1021 knlvvsafke ksqaqvteyl hnmrekyigd isrivrhmsl alcrnhesea liglqkwvsl
     1081 tfsplllded qsvnhsgive pfqwitglvy qaegqyekav shfahllqte eslstmgsdg
     1141 aqfciariie sytavsdwks leswllelqt lrakyagksy sgalttagne mnaihalaqf
     1201 degdlqaawa yldltpksss eltldpklal qrseqmllqa llfkiegnld kvphelqkak
     1261 smleemlsvl pldglaeata cvtqlhcifa vgegydlsqg ncwkhmgsqg ksklnqsglg
     1321 syllplqpli kgihqdcnpw lkvlrvyrti sptspvtlkl smnlmslark qgnltlancl
     1381 inylrdhvss csherycnll nlnlqyegil ilhaenkied afaniwsflr pylcsssfiv
     1441 ndvddglmka kaclklsnwl rqnysslnlr nivlrmlsdl nvatvsssgt ggysfsdenl
     1501 sskwsldviv eeivgtatkl stqlcpkmak swisyaswcf nqakssvanq qekclqscsf
     1561 spilvseltp krfkmtedei qivesvilpl fqkrdsaehv ddgaeqwgfc sgsaenlrtn
     1621 nmlmtlvqql vdimeaaaga pgtensgger lsstlasqll sslqhanfgi eethltyvid
     1681 klidiwwslr rrrvslfgha ahafikylly sstklsdgrl sgdfcqsqkq kvgsytlrat
     1741 lyvmhvllny glelkdtlep alstvpllsw qditpqlfar lsshpeevvr kqiesllmml
     1801 aklspssivy pmlvdinaye ekpseelqhi lgclrelypr liqdvqlvin elgnvtvlwe
     1861 elwlstlqdl hmdvmrrinv lkeeaariae nttlsqsekn kinaakysam mapivvaler
     1921 rlastsrkpe tphelwfhhe ykeqlksaiv slktppasaa algdvwrpfd hiaaslasyq
     1981 rkssislgev apqlamlsss dvpmpglekq vapfesdral tsalhgivti asfsehltil
     2041 stktkpkklv ilgsdgkayt yllkgredlr ldarimqllq ainsflhsss atnhnllgir
     2101 yysvtpisgr agliqwvdnv isiysifksw qnrvqvtqvs algagsakss vppvprpsdm
     2161 fygkiipalk ekgirrvisr rdwphevkrk vlldlmkevp kqllhqelwc asegfkafns
     2221 klkrysgsva amsmvghilg lgdrhldnil ldfssgdvvh idynvcfdkg qrlkvpeivp
     2281 frltqtieaa lgltgiegtf ranceavvsv lrknkdlllm llevfvwdpl iewtrgdfhd
     2341 daaiggeerk gmelavslsl fasrvqeirv plqehhdlll atfpavesal erfrdvlnqy
     2401 elvsalfyra dqersnlilh etsaksivae atcnsekica sfeiqarefk qaknvvaeka
     2461 qqattwieqh grildalrgn lipeisagmn lsgmadalsl tsavpeagvp ltivpeptqa
     2521 qcydidrevs qliaeldrgl ssavmalqay slalqrvlpl nylttstvhg waqvlqlsan
     2581 avssdilsla rrqaseliak vhgdnlefmk sshddlcfkv ekyaaeiekv eeecaelvns
     2641 igskteskak drlmfafmky mqsaglvrke dansslqyge skydgtkasr iredleekkd
     2701 kvlsvlsvam rslyddvkhr ileiyshtnr aqiensrpqs dlgtvfsgfe eqvekcilva
     2761 gfvnelwqqi ggdmpgvdrd lyyskyyseg nwasifktil nccksligem tevvlpdimr
     2821 savsfntevm dafglisqir gsidtaleql vevelerasl aeleqnyfvk vgliteqqla
     2881 leeaamkgrd hlsweeaeel asqeeacraq leqlhqtwnh rdmrtsslik reaeiksslv
     2941 sceqhfqsli tgddfreshr sksqvllail vkpfselesv dkalsslsss faphsdeipn
     3001 lveflssghs vsecvwnfgs llnnhsffiw kigvldsild lcihdmassv dqnlgfeqlf
     3061 dvvkrkleiq lqeyigrylk iriapallsw ldkenehlkl ltegakepsn dhvrkdveav
     3121 kkvqlmleey cnthetaraa rsaasvmkrq vnelkealrk tileivqmew mhdvgltpsh
     3181 tsrvlfqkff snddelypvv lnfsrpklle tmqsvlskla raieglksce htsivaegql
     3241 eramgwacgg pnssvagnss akasgippef hdhlmrrrhl lqearekass vvkicmsile
     3301 feasrdgifq ipregyalst gsdsrtwqqa yfnaltklev tyhsftrieq ewklaqsnme
     3361 vassglysat nelciaslka ksasgdlqst vlamrdcaye asvalsafar vsrghtalts
     3421 esgsmleevl aitedlhdvh nlgkeaasvh rslmedlska naillplesv lakdvsamte
     3481 amareretkm evspihgqai yqsyglrvre acqtfkplvp sltfsvkelh sllttlarta
     3541 slhagnlhka leglgesqev ksqsislsrp dlasdateyd erggesmsts gsgspkdlvg
     3601 ltgiplqeke wisppdsigt sgtessitsn gtslsdsind pivemmekis ldssqkkdhg
     3661 dpnfvpsses eydeishcgh rmsenmevkn tnevksanee tnenlktvps vndeavsapl
     3721 essqpsnnvn ldvkfqgkde vstlgkievg deshevpvps tdtasriarg knayamsvlr
     3781 rvemkldgrd iterreisia eqvdyllkqa tsvdnlcsmy egwtpwi
//
LOCUS       XP_016706767             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706767
VERSION     XP_016706767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851278.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..124
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12436
     Region          91..117
                     /region_name="PetM"
                     /note="PetM family of cytochrome b6f complex subunit 7;
                     pfam08041"
                     /db_xref="CDD:429798"
     CDS             1..124
                     /gene="LOC107921427"
                     /coded_by="XM_016851278.2:636..1010"
                     /db_xref="GeneID:107921427"
ORIGIN      
        1 mattasatps pptlaaasvg nprrrtkvnv nyitglnsfg glkahnnvvs lgqpvcieqs
       61 fakvvsslra pskgkgsggg alsstcnavg eifriaaimn glvlvgvavg fvllrieasl
      121 eeae
//
LOCUS       XP_016707884             373 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger transcription factor YY1 [Gossypium hirsutum].
ACCESSION   XP_016707884
VERSION     XP_016707884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="zinc finger transcription factor YY1"
                     /calculated_mol_wt=42625
     Region          <77..195
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          82..101
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(86,88,90,92..93,96..97,100,115,117,121..122,
                     125..126,129,145,147,149,151..152,155..156,159)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          108..130
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          138..160
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          168..190
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <227..262
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..373
                     /gene="LOC107922381"
                     /coded_by="XM_016852395.2:313..1434"
                     /db_xref="GeneID:107922381"
ORIGIN      
        1 memqyahglf errpllkska pavkwfkrwv pqdvvatggk cmvlkwvnen tlkalndkek
       61 epeapepepe pttevlflcs yegcgktfid agalrkhshi hgerqyvchw egcgkkflds
      121 sklkrhflih tgerdficph egcgkafsld fnlrshmkth sqenyhicpy pdcgkryahe
      181 yklknhiash heknttpeva kyapplekiv ktpkptggay gsassdrpya cpyegcekay
      241 iheyklklhl rrehpghmsd enaenatana dnemdeasdq dayagkrvng ksqkqqsrak
      301 pnvkmppakv arqkgsspsp atlpipkkqw pikeqvfeee dseeteedrd nvddgwryre
      361 nnedddeete yed
//
LOCUS       XP_016707883             373 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger transcription factor YY1 [Gossypium hirsutum].
ACCESSION   XP_016707883
VERSION     XP_016707883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="zinc finger transcription factor YY1"
                     /calculated_mol_wt=42625
     Region          <77..195
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          82..101
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(86,88,90,92..93,96..97,100,115,117,121..122,
                     125..126,129,145,147,149,151..152,155..156,159)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          108..130
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          138..160
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          168..190
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <227..262
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..373
                     /gene="LOC107922381"
                     /coded_by="XM_016852394.2:341..1462"
                     /db_xref="GeneID:107922381"
ORIGIN      
        1 memqyahglf errpllkska pavkwfkrwv pqdvvatggk cmvlkwvnen tlkalndkek
       61 epeapepepe pttevlflcs yegcgktfid agalrkhshi hgerqyvchw egcgkkflds
      121 sklkrhflih tgerdficph egcgkafsld fnlrshmkth sqenyhicpy pdcgkryahe
      181 yklknhiash heknttpeva kyapplekiv ktpkptggay gsassdrpya cpyegcekay
      241 iheyklklhl rrehpghmsd enaenatana dnemdeasdq dayagkrvng ksqkqqsrak
      301 pnvkmppakv arqkgsspsp atlpipkkqw pikeqvfeee dseeteedrd nvddgwryre
      361 nnedddeete yed
//
LOCUS       XP_016707885             373 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger transcription factor YY1 [Gossypium hirsutum].
ACCESSION   XP_016707885
VERSION     XP_016707885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852396.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="zinc finger transcription factor YY1"
                     /calculated_mol_wt=42625
     Region          <77..195
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          82..101
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(86,88,90,92..93,96..97,100,115,117,121..122,
                     125..126,129,145,147,149,151..152,155..156,159)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          108..130
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          138..160
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          168..190
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <227..262
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..373
                     /gene="LOC107922381"
                     /coded_by="XM_016852396.2:299..1420"
                     /db_xref="GeneID:107922381"
ORIGIN      
        1 memqyahglf errpllkska pavkwfkrwv pqdvvatggk cmvlkwvnen tlkalndkek
       61 epeapepepe pttevlflcs yegcgktfid agalrkhshi hgerqyvchw egcgkkflds
      121 sklkrhflih tgerdficph egcgkafsld fnlrshmkth sqenyhicpy pdcgkryahe
      181 yklknhiash heknttpeva kyapplekiv ktpkptggay gsassdrpya cpyegcekay
      241 iheyklklhl rrehpghmsd enaenatana dnemdeasdq dayagkrvng ksqkqqsrak
      301 pnvkmppakv arqkgsspsp atlpipkkqw pikeqvfeee dseeteedrd nvddgwryre
      361 nnedddeete yed
//
LOCUS       XP_016707886             373 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger transcription factor YY1 [Gossypium hirsutum].
ACCESSION   XP_016707886
VERSION     XP_016707886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852397.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="zinc finger transcription factor YY1"
                     /calculated_mol_wt=42625
     Region          <77..195
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          82..101
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(86,88,90,92..93,96..97,100,115,117,121..122,
                     125..126,129,145,147,149,151..152,155..156,159)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          108..130
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          138..160
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          168..190
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <227..262
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..373
                     /gene="LOC107922381"
                     /coded_by="XM_016852397.2:328..1449"
                     /db_xref="GeneID:107922381"
ORIGIN      
        1 memqyahglf errpllkska pavkwfkrwv pqdvvatggk cmvlkwvnen tlkalndkek
       61 epeapepepe pttevlflcs yegcgktfid agalrkhshi hgerqyvchw egcgkkflds
      121 sklkrhflih tgerdficph egcgkafsld fnlrshmkth sqenyhicpy pdcgkryahe
      181 yklknhiash heknttpeva kyapplekiv ktpkptggay gsassdrpya cpyegcekay
      241 iheyklklhl rrehpghmsd enaenatana dnemdeasdq dayagkrvng ksqkqqsrak
      301 pnvkmppakv arqkgsspsp atlpipkkqw pikeqvfeee dseeteedrd nvddgwryre
      361 nnedddeete yed
//
LOCUS       XP_016706692             359 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase-like protein At5g23170 [Gossypium
            hirsutum].
ACCESSION   XP_016706692
VERSION     XP_016706692.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706692.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="serine/threonine-protein kinase-like protein
                     At5g23170"
                     /calculated_mol_wt=39818
     Region          22..285
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(22..25,28,30,42,44,78,96..99,145,149..150,152,
                     162..163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..359
                     /gene="LOC107921329"
                     /coded_by="XM_016851203.2:286..1365"
                     /db_xref="GeneID:107921329"
ORIGIN      
        1 mvefgyeqlv katqsfcpsr ligkgshgav yqgvlqdnrv vavkrssing veaqrdnlkk
       61 leneisilss lrqscnvisf lgashdsvqn dkllvmelmp ngslhdllhv aatppswpqr
      121 veialqiara vqflheskps vihrdiksan ilfdsnwtak lcdfglaisp adslsqatqp
      181 agtigyldps ytapnklstk ndvfsfgvvl leiiscrkvi dvtkapasiv ewaiplvkkq
      241 rvveicdsri pfpmymesri rrilsvasrc lsdkeerrps igeiivamet csiepvrsit
      301 twnsviqylv qlkrrrklsg eycirsavys trqgedvnsh vstgkvvllk emladvrlk
//
LOCUS       XP_016707574             548 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TCP8 [Gossypium hirsutum].
ACCESSION   XP_016707574
VERSION     XP_016707574.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852085.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707574.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..548
                     /product="transcription factor TCP8"
                     /calculated_mol_wt=57649
     Region          173..>254
                     /region_name="TCP"
                     /note="TCP family transcription factor; pfam03634"
                     /db_xref="CDD:460998"
     CDS             1..548
                     /gene="LOC107922196"
                     /coded_by="XM_016852085.2:729..2375"
                     /db_xref="GeneID:107922196"
ORIGIN      
        1 meltdlqsnk qtknnssssn nnnnnsaeph hqslqqhhlq hqkqsaspql vvpfdgtrss
       61 gpssgnpfnm gsishlhphh pfhhlllhpa sstttttttp plpsssssss ssssastttt
      121 nppqlvdasl aiatrstsln idsknqtdlp isstttpast ttttttanpp vkrstkdrht
      181 kvdgrgrrir mpatcaarvf qltrelghks dgetiewllq qaepaiiaat gtgtipanfs
      241 tlnislrssg stlsappsks aphsfhgala lashhhhhhp yeegfahsal lgfqqqhllt
      301 adqiaealpg ggggdggnls enymrkrfre dlfkdddqqq gesgsgggdg spikafksgl
      361 tqlskpqhda gssalprpsn ilpgtamwav apapssgags tfwmlpmsag acgpsvapsa
      421 atgagpsdhp qmwpfgtanq asgntlqapl hflprfnlpg nvefqggras plqlgsmlmq
      481 qqqqqqphhh lglgmsdsnl gmlaalnays rggsnvnsdq nnplehhhqq hqpqgtdsgd
      541 dqdpntsq
//
LOCUS       XP_016708043             340 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA3 [Gossypium hirsutum].
ACCESSION   XP_016708043
VERSION     XP_016708043.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852554.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708043.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="probable magnesium transporter NIPA3"
                     /calculated_mol_wt=36799
     Region          14..306
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..340
                     /gene="LOC107922488"
                     /coded_by="XM_016852554.2:438..1460"
                     /db_xref="GeneID:107922488"
ORIGIN      
        1 mavvqkwreg mssdnvkglv lalssslfig asfivkkkgl kkagasgira gvggysylle
       61 plwwagmitm vvgeianfaa yafapailvt plgalsiiis avlahiilre rlhtfgilgc
      121 ilcvvgstti vlhapqerqi esvtevwdla tepgflfyta lvltavfili yqfvpqygqt
      181 himvyigvcs lvgsisvmsv kalgialklt fsgtnqlvyp qtwaftlvvi tcvltqmnyl
      241 nkaldtfnta vvspiyyvmf tsltilasvi mfkdwdgqsp tqiltemcgf vtilsgtfll
      301 hktkdmadgp glstslsmrs lkheeddgfs egiplkrqdt
//
LOCUS       XP_016706824             486 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706824
VERSION     XP_016706824.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706824.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..486
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55239
     Region          <31..195
                     /region_name="DUF4220"
                     /note="Domain of unknown function (DUF4220); pfam13968"
                     /db_xref="CDD:464058"
     Region          428..479
                     /region_name="DUF594"
                     /note="Protein of unknown function, DUF594; pfam04578"
                     /db_xref="CDD:461358"
     CDS             1..486
                     /gene="LOC107921488"
                     /coded_by="XM_016851335.2:709..2169"
                     /db_xref="GeneID:107921488"
ORIGIN      
        1 mirtglyesa gtvkqfvedp nvkflraart sfeffrplfl dlpfkvsrks ldgnvylkdk
       61 saeeafrlvk ielqffhdlf ftknpiqhrh rklnaflrgf yilsalsvli vlstqdhigv
      121 skrditgvdi avtylllvga illdvlgall dllsywtmte fgiaggklyk lyhwlaasrl
      181 rsiksmagtp kiaqydwlkd fcskrgigif sglinlidnn elrnkyriis wvelehylee
      241 fiytglkker lnpslsaqvl riidqdaslq pflelgkgar egmptgltrv ififhiatkl
      301 iyynavqmgq pvrssscris nilsdymlyl vlvhptmlpk dfgdttkesf vpdkrkpdli
      361 rkerqrmast fsaedtpdtt aaiklftngl latnssltqv edtepnvlvg glhvaqqlla
      421 lldqfrydyd giweivsdiw mkmlihaaky cswkehalal rqggelltyv sllsahfgls
      481 hyieps
//
LOCUS       XP_016706196             233 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At3g51220 [Gossypium hirsutum].
ACCESSION   XP_016706196
VERSION     XP_016706196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850707.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="WEB family protein At3g51220"
                     /calculated_mol_wt=26356
     CDS             1..233
                     /gene="LOC107920888"
                     /coded_by="XM_016850707.2:110..811"
                     /db_xref="GeneID:107920888"
ORIGIN      
        1 metqvpnpss kppkdyrsnv dtsrpfrsvk eavavfgerl lvgeiytpkp ytysrppsqe
       61 itwfspspls rkeddqesih hqgvldtlkk leteleetka elkllkeres etevalasln
      121 aelhknmskl araeaaaakm aaetttprtv smemgnksed rareeerrke lmkrmennpt
      181 lsqilsigek egyfggkrer klmkkkpivp lvgdwlfkkk gspttlhnpl yas
//
LOCUS       XP_016706198             232 aa            linear   PLN 06-AUG-2024
DEFINITION  nifU-like protein 2, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706198
VERSION     XP_016706198.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850709.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706198.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="nifU-like protein 2, chloroplastic"
                     /calculated_mol_wt=25040
     Region          87..152
                     /region_name="NifU"
                     /note="NifU-like domain; pfam01106"
                     /db_xref="CDD:460066"
     Region          168..230
                     /region_name="NifU"
                     /note="NifU-like domain; pfam01106"
                     /db_xref="CDD:460066"
     CDS             1..232
                     /gene="LOC107920889"
                     /coded_by="XM_016850709.2:199..897"
                     /db_xref="GeneID:107920889"
ORIGIN      
        1 mqaivispty ccnahqspep sssrplttkp ssyfgirvll ekgrnparrc swrcvrvrsp
       61 altrrkvvka vatpdsalel pliaanvesv ldevrpylia dggnvalhei dgnvvrlklq
      121 gacgsclssv ttmkmgiekr lmekipeiva vepitdeetg lelneeniek vleeirpylv
      181 gaaggslelv aieepivkvr itgpaagvmt vrvavtqklr ekiptiaavq ll
//
LOCUS       XP_016722804            1468 aa            linear   PLN 06-AUG-2024
DEFINITION  DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016722804
VERSION     XP_016722804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1468
                     /product="DExH-box ATP-dependent RNA helicase DExH7,
                     chloroplastic"
                     /calculated_mol_wt=163653
     Region          426..468
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cd00048"
                     /db_xref="CDD:380679"
     Site            order(426..427,429,449,465..467)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     Region          624..>1166
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1301..1397
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1468
                     /gene="LOC107934804"
                     /coded_by="XM_016867315.2:166..4572"
                     /db_xref="GeneID:107934804"
ORIGIN      
        1 mapkkkpqkq snrkatsass ssssskanqa tssaprlqis aenenrlrrl llnsghstqs
       61 qsqsdlnppq dslskaqkak klkalyekls cegfsndqie lalsslkdga tfetaldwlc
      121 lnlprnelpl kfssgislhs dgggsisvis veredwtpsv dastrikenl hglsvrtkss
      181 eddnslnmcq psqadwirqy meqqeedesk twedeasdeg saeevsgprp ydviakeyha
      241 arleatkake kkdkrgqeka gsrirklkqe lsalglsdav lasdflhera sasvsegtvt
      301 ssmpeeqpem islgdaecns aacvitsgva tgsvndtets kelstksips llptqekgds
      361 enmsedleig dffledssin dvlasevlkl rkqekmkely seknlekldg iwkkgeskki
      421 pkavlhqlcq rsgweapkfd kmpakgksfa ysvsvlrkas grgksrkagg litlqlpneq
      481 eafesaedsq nrvaafalcq lfpdlptqli vtepysslif qwkggesltk ieeneedrra
      541 gfvdrllrde dsrskapghd tnesaldefq kaclednktl sssvadpvye rkshakemes
      601 vylrqeeekr khtqrykeml ktraalpvag lkndilqllk ennvlvvcge tgsgkttqvp
      661 qfilddmies ghgghcsiic tqprriaais vaervaderc epspgsnrsl vgyqvrldna
      721 rnektkllfc ttgillrkla gdknltgvth iivdevhers llgdfllivl knliekqsvs
      781 ntpklkvilm satvdsdlfs ryfglcpvit aqgrthpvtt cflediyeri nyhlasdspa
      841 slrcetstrd mrgpvnnhrg kknlvlsawg ddsllseeyv nphydsssyq syseqtqqnl
      901 krlnedvidy dlledlvchv detcdkgail iflpgvveih tlldrlaasy rfagpssdwl
      961 lplhssiaad eqkkvflnpp dgirkviiat niaetsitid dvvyvidcgk hkenrynpqk
     1021 klssmvedwi sranakqrrg ragrvkpgic fclytrhrfe klmrpyqvpe mlrmplvelc
     1081 lqikllslgq ikpflskale ppkeeamnsa isllyevgav egdeeltplg hhlaklpvdv
     1141 ligkmllygg ifgclspils isaclsyksp flypqdekqn veraklalls ekldessdln
     1201 daerqsdhll mmvayrkwek ifrekgvkaa qrfckmyfls ssvmsmirdm riqfgtllad
     1261 igfinlpkny ksrgkrkenl dgwfsdysqp fnihshhsav vkailcagly pnvaatelgi
     1321 tgvalsrlkl npatkghpvw ydgrrevhih pssinsslks fqhlflvfle kvetnkvflr
     1381 dttiispfsi llfggliniq hqsglvvidg wlkltapaqt avlckelrsa lhsilkelir
     1441 kpenativdn evvksmihll leedkpsk
//
LOCUS       XP_016722801             604 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase ABHD3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016722801
VERSION     XP_016722801.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722801.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..604
                     /product="phospholipase ABHD3 isoform X1"
                     /calculated_mol_wt=67559
     Region          106..449
                     /region_name="PLN02511"
                     /note="hydrolase"
                     /db_xref="CDD:215282"
     CDS             1..604
                     /gene="LOC107934802"
                     /coded_by="XM_016867312.2:56..1870"
                     /db_xref="GeneID:107934802"
ORIGIN      
        1 mlsiysldfp lifffisfsl fsldsfpksm dweplaaaka sispydllfq alalipfshy
       61 ffaasflfli flysfleihf lqdlltlfrg dpvtlnynsc selaqsvvan ckilqgryla
      121 tpwlssphlq taflsflgrp ppltyrrhlf rafdggtial dwltytdvvg gtscmldssa
      181 alkgdktpiv ivipgltsds aaayvkhlaf nlarqgwnvv vsnhrglggv sltsdccyna
      241 gwtedlrkii dhirceypea plyavgtsig anilvkylge dgantplvga aaicspwdll
      301 icdrfinrrp mqklydralt vglqgyaqlh qsilsrlanw egiekssslr dfdnhatrvl
      361 rkfetvdtyy rrssstnyve nvsvpllcvs alddpvctse aipwdecrln eniilattph
      421 gghlafyegi tassiwwvrv vneffgvlrt sphiegrkkm qgstmpkplq ssidqapyln
      481 vmedgmvtam sneqtdafve disnehtths nkdegtisdk gtsvdltdkl npekqimqqv
      541 eqnvkdlivp vqgridklsr rsrqsiwllv yiavittwpf vgsvllsvlk rrfktfkpgt
      601 lfrk
//
LOCUS       XP_016722802             531 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase ABHD3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016722802
VERSION     XP_016722802.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722802.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..531
                     /product="phospholipase ABHD3 isoform X2"
                     /calculated_mol_wt=58999
     Region          106..449
                     /region_name="PLN02511"
                     /note="hydrolase"
                     /db_xref="CDD:215282"
     CDS             1..531
                     /gene="LOC107934802"
                     /coded_by="XM_016867313.2:56..1651"
                     /db_xref="GeneID:107934802"
ORIGIN      
        1 mlsiysldfp lifffisfsl fsldsfpksm dweplaaaka sispydllfq alalipfshy
       61 ffaasflfli flysfleihf lqdlltlfrg dpvtlnynsc selaqsvvan ckilqgryla
      121 tpwlssphlq taflsflgrp ppltyrrhlf rafdggtial dwltytdvvg gtscmldssa
      181 alkgdktpiv ivipgltsds aaayvkhlaf nlarqgwnvv vsnhrglggv sltsdccyna
      241 gwtedlrkii dhirceypea plyavgtsig anilvkylge dgantplvga aaicspwdll
      301 icdrfinrrp mqklydralt vglqgyaqlh qsilsrlanw egiekssslr dfdnhatrvl
      361 rkfetvdtyy rrssstnyve nvsvpllcvs alddpvctse aipwdecrln eniilattph
      421 gghlafyegi tassiwwvrv vneffgvlrt sphiegrkkm qgstmpkplq ssidqapyln
      481 vmedgmvtam sneqtdafve disnehtths nkdeasgakc kgfdcpcsrt h
//
LOCUS       XP_016722803             474 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g49945 [Gossypium hirsutum].
ACCESSION   XP_016722803
VERSION     XP_016722803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..474
                     /product="uncharacterized protein At5g49945"
                     /calculated_mol_wt=53238
     Region          146..463
                     /region_name="CCDC47"
                     /note="PAT complex subunit CCDC47; pfam07946"
                     /db_xref="CDD:462322"
     CDS             1..474
                     /gene="LOC107934803"
                     /coded_by="XM_016867314.2:171..1595"
                     /db_xref="GeneID:107934803"
ORIGIN      
        1 mdlssfrllf llsllvthls fshvladshf egfdaeeddp veddilhhhs ipsppvtqsd
       61 sqplsdletk shpdpnpvpt sdspsqsdlq kpsttsfdyw dedefeglpi eqpppeppkv
      121 tetatpddpe settskpqna tvpkksftve iacgsflivf ivnyftgkre nenlalawaa
      181 kfatkgsife knfsllgvge gedsplllke gqtvfkfyas grrycqglla tmelksrhdl
      241 isrlfnlvvp ckdeitfevy mndeamdqvv favakkkaak gmqkevrdlq rfaglmptps
      301 grkwvvdels viseskevag dlitetvleq vfgdkafeky gknfismhfs dqhpgllrkm
      361 llfkfalpda nhmaditrlv alvpyyidli gryklssqar skteaarvka aqeaykelqn
      421 arqealqrkk aekkkmleea eaklsaeaar kreakdrarq mkkamprmkm trah
//
LOCUS       XP_016707162             228 aa            linear   PLN 06-AUG-2024
DEFINITION  BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
            [Gossypium hirsutum].
ACCESSION   XP_016707162
VERSION     XP_016707162.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851673.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..228
                     /product="BRASSINOSTEROID INSENSITIVE 1-associated
                     receptor kinase 1"
                     /calculated_mol_wt=25461
     Region          <54..>182
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <176..>228
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..228
                     /gene="LOC107921831"
                     /coded_by="XM_016851673.2:94..780"
                     /db_xref="GeneID:107921831"
ORIGIN      
        1 mpcrdlsnnk legdipvngs fslftpisfa nnrlnnpppa ppppitptap ipserpesqa
       61 pldwavrkri algaarglay fhdhcdpkii hrdvkaanil ldeefeavvg dfglaklmdy
      121 kdthvttavr gtighiapey lstgkslekt dvfgygvmll elitrqrafd larlandddv
      181 mqplplraaq dlirflhqpv yhsqrfklwl syfeiyggkl fdllsdrk
//
LOCUS       XP_016706490             425 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WHAT'S THIS FACTOR 9, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016706490
VERSION     XP_016706490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..425
                     /product="protein WHAT'S THIS FACTOR 9, mitochondrial"
                     /calculated_mol_wt=49330
     Region          28..362
                     /region_name="PORR"
                     /note="Plant organelle RNA recognition domain; pfam11955"
                     /db_xref="CDD:432218"
     CDS             1..425
                     /gene="LOC107921134"
                     /coded_by="XM_016851001.2:40..1317"
                     /db_xref="GeneID:107921134"
ORIGIN      
        1 mlsmalwrrv phrlllirsf vyarikwvrd pyldiavere knlkeilslk nqilsspsks
       61 lplsslsrlk shfnlptsts klfqnypsif spfqpspslp lhvkltpqam tlhkeelaih
      121 nspphrndvv nrlvkllmlt kavrlplhil dkfkfdlglp tnyitfllsd ypdyfqicey
      181 knpsdgketl fleliswrne laisemekra sfsdgvklkk glplrfsmkl pngfdlekkv
      241 knwvdawqdl pyispyensf hlgpnsdqae kwtvavlhel lwllvskkte gknvfclgey
      301 lgfgnrfkka lmhfpgifyv snkirtqtvv lkeayrkdfl mekhplmgmr fryihlmnks
      361 ekfrkrdgvp vfrrkrkvms nadegevike ddkiveenkd lnllsgsgsn dgfddepskv
      421 qvmdi
//
LOCUS       XP_016706539             853 aa            linear   PLN 06-AUG-2024
DEFINITION  putative DNA (cytosine-5)-methyltransferase CMT1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706539
VERSION     XP_016706539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..853
                     /product="putative DNA (cytosine-5)-methyltransferase CMT1
                     isoform X1"
                     /calculated_mol_wt=96411
     Region          108..225
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          391..445
                     /region_name="CD_CMT3_like"
                     /note="chromodomain of chromomethylase 3, and similar
                     proteins; cd18635"
                     /db_xref="CDD:349285"
     Site            order(391..395,416,418..421,425,427..430,432..433,440,
                     443..444)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349285"
     Region          <456..814
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..853
                     /gene="LOC107921173"
                     /coded_by="XM_016851050.2:89..2650"
                     /db_xref="GeneID:107921173"
ORIGIN      
        1 mgkgskrkhq kkidesidse setqsqgltt lldppkpkka rkvvpdsdlc lvgppiapae
       61 arqrwphryq sknkvkkqav ieasndeene vlqaknhyve aivdgcrykl gnnayvkaed
      121 gnldyiariv effetvdqep ffkaqwfyra edtvinkdna hlidkrrvfl sdihddnpln
      181 ciiskveiae iapdndsaak esripdsgly ynmkyslqhl tfknifteis kkdsgtssvv
      241 ssecgsnnts sevqrfdnsq kylldlysgc gamstglcmg aslagiklvt kwavdinsfa
      301 ckslqwnhpe tkvrneaaed flcllkewek lcqkfsllep nkpsetvsse tgeedddddd
      361 gqgceeekeq eqeqekerqd dsssedssee feverlldic fgdpnkakkr glyfkvrwkg
      421 ydksydtwep ieglsnceer lkefvskgyk snilplpgsv yficggppcq gvsgfnrfrn
      481 snapledvkn kqlvvymdai ehlkpryvlm envvdilkfa kgflgryavg rlvsmnyqar
      541 mgmmaagsyg vpqfrmrvfl wgshpseklp qyplpthevf srggvpnefe eihvtydkkd
      601 scqlesaltl adaisdlpqv nndesrdqrn ygttartefq kfirlrrkdv inltvdsrha
      661 pslgmlcdhq plqlnpddyd rvchipkkkg anfrdlpgvv vgennrvewd ttmdrvllks
      721 gkplvpdyam kfvkgrstkp fgrlwmdeiv ntvvtraeph nqtvihpsqn rvltirenar
      781 lqgfpdcykl fgtikeryiq vgnavavpva ialgysfgla cqnlcgdepl mtlpfkfpnc
      841 larssqidgg dsd
//
LOCUS       XP_040943445             838 aa            linear   PLN 06-AUG-2024
DEFINITION  putative DNA (cytosine-5)-methyltransferase CMT1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943445
VERSION     XP_040943445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087511.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..838
                     /product="putative DNA (cytosine-5)-methyltransferase CMT1
                     isoform X2"
                     /calculated_mol_wt=94792
     Region          108..225
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          391..445
                     /region_name="CD_CMT3_like"
                     /note="chromodomain of chromomethylase 3, and similar
                     proteins; cd18635"
                     /db_xref="CDD:349285"
     Site            order(391..395,416,418..421,425,427..430,432..433,440,
                     443..444)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349285"
     Region          <456..799
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..838
                     /gene="LOC107921173"
                     /coded_by="XM_041087511.1:89..2605"
                     /db_xref="GeneID:107921173"
ORIGIN      
        1 mgkgskrkhq kkidesidse setqsqgltt lldppkpkka rkvvpdsdlc lvgppiapae
       61 arqrwphryq sknkvkkqav ieasndeene vlqaknhyve aivdgcrykl gnnayvkaed
      121 gnldyiariv effetvdqep ffkaqwfyra edtvinkdna hlidkrrvfl sdihddnpln
      181 ciiskveiae iapdndsaak esripdsgly ynmkyslqhl tfknifteis kkdsgtssvv
      241 ssecgsnnts sevqrfdnsq kylldlysgc gamstglcmg aslagiklvt kwavdinsfa
      301 ckslqwnhpe tkvrneaaed flcllkewek lcqkfsllep nkpsetvsse tgeedddddd
      361 gqgceeekeq eqeqekerqd dsssedssee feverlldic fgdpnkakkr glyfkvrwkg
      421 ydksydtwep ieglsnceer lkefvskgyk snilplpgsv yficggppcq gvsgfnrfrn
      481 snapledvkn kqlvvymdai ehlkpryvlm envvdilkfa kgflgryavg rlvsmnyqar
      541 mgmmaagsyg vpqfrmrvfl wgshpseklp qyplpthevf srggvpnefe eihvtydkkd
      601 scqlesaltl adaisdlpqv nndesrdqrn ygttartefq kfirlrrkgm lcdhqplqln
      661 pddydrvchi pkkkganfrd lpgvvvgenn rvewdttmdr vllksgkplv pdyamkfvkg
      721 rstkpfgrlw mdeivntvvt raephnqtvi hpsqnrvlti renarlqgfp dcyklfgtik
      781 eryiqvgnav avpvaialgy sfglacqnlc gdeplmtlpf kfpnclarss qidggdsd
//
LOCUS       XP_016706541             777 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA (cytosine-5)-methyltransferase CMT3 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016706541
VERSION     XP_016706541.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851052.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..777
                     /product="DNA (cytosine-5)-methyltransferase CMT3 isoform
                     X3"
                     /calculated_mol_wt=88423
     Region          108..225
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          391..445
                     /region_name="CD_CMT3_like"
                     /note="chromodomain of chromomethylase 3, and similar
                     proteins; cd18635"
                     /db_xref="CDD:349285"
     Site            order(391..395,416,418..421,425,427..430,432..433,440,
                     443..444)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349285"
     Region          <456..>641
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..777
                     /gene="LOC107921173"
                     /coded_by="XM_016851052.2:90..2423"
                     /db_xref="GeneID:107921173"
ORIGIN      
        1 mgkgskrkhq kkidesidse setqsqgltt lldppkpkka rkvvpdsdlc lvgppiapae
       61 arqrwphryq sknkvkkqav ieasndeene vlqaknhyve aivdgcrykl gnnayvkaed
      121 gnldyiariv effetvdqep ffkaqwfyra edtvinkdna hlidkrrvfl sdihddnpln
      181 ciiskveiae iapdndsaak esripdsgly ynmkyslqhl tfknifteis kkdsgtssvv
      241 ssecgsnnts sevqrfdnsq kylldlysgc gamstglcmg aslagiklvt kwavdinsfa
      301 ckslqwnhpe tkvrneaaed flcllkewek lcqkfsllep nkpsetvsse tgeedddddd
      361 gqgceeekeq eqeqekerqd dsssedssee feverlldic fgdpnkakkr glyfkvrwkg
      421 ydksydtwep ieglsnceer lkefvskgyk snilplpgsv yficggppcq gvsgfnrfrn
      481 snapledvkn kqlvvymdai ehlkpryvlm envvdilkfa kgflgryavg rlvsmnyqar
      541 mgmmaagsyg vpqfrmrvfl wgshpseklp qyplpthevf srggvpnefe eihvtydkkd
      601 scqlesaltl adaisdlpqv nndesrdqrn ygttartefq kfirlrrkdv inltvdsrha
      661 pslgmlcdhq plqlnpddyd rvchipkkkg anfrdlpgvv vgennrvewd ttmdrvllks
      721 gkplvpdyam kfvkgrstkp sfilpkieyl qfarmldyrd spiatsflel lrrdtyr
//
LOCUS       XP_040943446             762 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA (cytosine-5)-methyltransferase CMT3 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943446
VERSION     XP_040943446.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087512.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..762
                     /product="DNA (cytosine-5)-methyltransferase CMT3 isoform
                     X4"
                     /calculated_mol_wt=86804
     Region          108..225
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          391..445
                     /region_name="CD_CMT3_like"
                     /note="chromodomain of chromomethylase 3, and similar
                     proteins; cd18635"
                     /db_xref="CDD:349285"
     Site            order(391..395,416,418..421,425,427..430,432..433,440,
                     443..444)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349285"
     Region          <456..>641
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..762
                     /gene="LOC107921173"
                     /coded_by="XM_041087512.1:90..2378"
                     /db_xref="GeneID:107921173"
ORIGIN      
        1 mgkgskrkhq kkidesidse setqsqgltt lldppkpkka rkvvpdsdlc lvgppiapae
       61 arqrwphryq sknkvkkqav ieasndeene vlqaknhyve aivdgcrykl gnnayvkaed
      121 gnldyiariv effetvdqep ffkaqwfyra edtvinkdna hlidkrrvfl sdihddnpln
      181 ciiskveiae iapdndsaak esripdsgly ynmkyslqhl tfknifteis kkdsgtssvv
      241 ssecgsnnts sevqrfdnsq kylldlysgc gamstglcmg aslagiklvt kwavdinsfa
      301 ckslqwnhpe tkvrneaaed flcllkewek lcqkfsllep nkpsetvsse tgeedddddd
      361 gqgceeekeq eqeqekerqd dsssedssee feverlldic fgdpnkakkr glyfkvrwkg
      421 ydksydtwep ieglsnceer lkefvskgyk snilplpgsv yficggppcq gvsgfnrfrn
      481 snapledvkn kqlvvymdai ehlkpryvlm envvdilkfa kgflgryavg rlvsmnyqar
      541 mgmmaagsyg vpqfrmrvfl wgshpseklp qyplpthevf srggvpnefe eihvtydkkd
      601 scqlesaltl adaisdlpqv nndesrdqrn ygttartefq kfirlrrkgm lcdhqplqln
      661 pddydrvchi pkkkganfrd lpgvvvgenn rvewdttmdr vllksgkplv pdyamkfvkg
      721 rstkpsfilp kieylqfarm ldyrdspiat sflellrrdt yr
//
LOCUS       XP_016706741             222 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DMP3 [Gossypium hirsutum].
ACCESSION   XP_016706741
VERSION     XP_016706741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851252.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="protein DMP3"
                     /calculated_mol_wt=24033
     Region          52..216
                     /region_name="DUF679"
                     /note="Protein of unknown function (DUF679); pfam05078"
                     /db_xref="CDD:461544"
     CDS             1..222
                     /gene="LOC107921397"
                     /coded_by="XM_016851252.2:193..861"
                     /db_xref="GeneID:107921397"
ORIGIN      
        1 mseaslrprv liskqtsqse pptissttes erpkpqprpp tlsqraisqt lastanlanl
       61 lptgtllafq llvptftnng scdaatrsmt lllllllals cflasftdsv kssdgqvyyg
      121 fatfkgmflf dypdskesdl pdlskyrikf mdgvhgvlsv lvfgvvalrd knvlncfypt
      181 pkheteevln iapvgvglic sllfvvfptr rhgigypvta gk
//
LOCUS       XP_016707497             941 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707497
VERSION     XP_016707497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852008.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..941
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=105750
     Region          173..272
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(198,205,208,248,252,259)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99922"
     Region          <503..>600
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          726..855
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     CDS             1..941
                     /gene="LOC107922141"
                     /coded_by="XM_016852008.2:357..3182"
                     /db_xref="GeneID:107922141"
ORIGIN      
        1 mrtkqkracr kpparksaal aenveavkqg ekavnqseka vnqnerivnq seeaflsfin
       61 qnrkgdsvsa dsndlevvdl dsdeaksnss lsssssdsde sfsaeesstd dsssvdrrsr
      121 kstkrhgnvk qeasklpnkg rkddvnssrv lhsfgkkhde ykmseqdpry ntkelkaale
      181 vikkimkmde aqpfsvpvdp valgksdyfn vidtpmdfgt icsnlenstk ymntkdvfnd
      241 vqyiwencck cnqkgeyivy lmkrvkkkfm kywiaaglsi gqsgksnvgt sfepsttdya
      301 trhrghepfy pvgsadgasq mqqgqlgfnq hhlyfpsscy iqphqlpqpp psttrpqfsq
      361 lspvsyhqhh qsqhpppstn qpqfsqlqsh tgyshfqppg diapkhkkqa skkhkknsst
      421 gpaasilsgs pgqsqqphls yklpyglqqy qhsinrlqss qlqgavdggh shflpqsdyt
      481 rshgyvpyyp vdpmvvpgqs hpqqsrlsdg essesqerql kashcqpqss qlqhnvdieh
      541 shtsltdsal raircalrys aspktnksnq enqgplgctk sqpeqspqrp eqrqftkkrk
      601 grgptrclfl ndladgerif vhinkfgqpv gpnssklssf lgtvarnghr aplnfidwra
      661 lpdsykddmw eyvqtkfdvd psgkswvmqs iatkwrdwka dlkatyydsl ntdeerlkvs
      721 dprvvpdqwp slisywnsed tkkrcarnra nrqkhtcghs sgtksyaric eeeqnkrpdg
      781 keptraelyi lthtrkngqp vddtaaklis kiheqeakkq ntsqcsdesn dtlcqvmgee
      841 qgknvgpygm gpnrtgifgp rpgrvvlarm askaersane evrkiavkme ameekyalme
      901 kniarmtsnm ekflekiggs snilgseqrh heeedpeedd a
//
LOCUS       XP_040943447             941 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943447
VERSION     XP_040943447.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087513.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..941
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=105750
     Region          173..272
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(198,205,208,248,252,259)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99922"
     Region          <503..>600
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          726..855
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     CDS             1..941
                     /gene="LOC107922141"
                     /coded_by="XM_041087513.1:323..3148"
                     /db_xref="GeneID:107922141"
ORIGIN      
        1 mrtkqkracr kpparksaal aenveavkqg ekavnqseka vnqnerivnq seeaflsfin
       61 qnrkgdsvsa dsndlevvdl dsdeaksnss lsssssdsde sfsaeesstd dsssvdrrsr
      121 kstkrhgnvk qeasklpnkg rkddvnssrv lhsfgkkhde ykmseqdpry ntkelkaale
      181 vikkimkmde aqpfsvpvdp valgksdyfn vidtpmdfgt icsnlenstk ymntkdvfnd
      241 vqyiwencck cnqkgeyivy lmkrvkkkfm kywiaaglsi gqsgksnvgt sfepsttdya
      301 trhrghepfy pvgsadgasq mqqgqlgfnq hhlyfpsscy iqphqlpqpp psttrpqfsq
      361 lspvsyhqhh qsqhpppstn qpqfsqlqsh tgyshfqppg diapkhkkqa skkhkknsst
      421 gpaasilsgs pgqsqqphls yklpyglqqy qhsinrlqss qlqgavdggh shflpqsdyt
      481 rshgyvpyyp vdpmvvpgqs hpqqsrlsdg essesqerql kashcqpqss qlqhnvdieh
      541 shtsltdsal raircalrys aspktnksnq enqgplgctk sqpeqspqrp eqrqftkkrk
      601 grgptrclfl ndladgerif vhinkfgqpv gpnssklssf lgtvarnghr aplnfidwra
      661 lpdsykddmw eyvqtkfdvd psgkswvmqs iatkwrdwka dlkatyydsl ntdeerlkvs
      721 dprvvpdqwp slisywnsed tkkrcarnra nrqkhtcghs sgtksyaric eeeqnkrpdg
      781 keptraelyi lthtrkngqp vddtaaklis kiheqeakkq ntsqcsdesn dtlcqvmgee
      841 qgknvgpygm gpnrtgifgp rpgrvvlarm askaersane evrkiavkme ameekyalme
      901 kniarmtsnm ekflekiggs snilgseqrh heeedpeedd a
//
LOCUS       XP_016707498             940 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707498
VERSION     XP_016707498.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852009.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..940
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=105622
     Region          173..272
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(198,205,208,248,252,259)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99922"
     Region          <503..>600
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          726..854
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     CDS             1..940
                     /gene="LOC107922141"
                     /coded_by="XM_016852009.2:323..3145"
                     /db_xref="GeneID:107922141"
ORIGIN      
        1 mrtkqkracr kpparksaal aenveavkqg ekavnqseka vnqnerivnq seeaflsfin
       61 qnrkgdsvsa dsndlevvdl dsdeaksnss lsssssdsde sfsaeesstd dsssvdrrsr
      121 kstkrhgnvk qeasklpnkg rkddvnssrv lhsfgkkhde ykmseqdpry ntkelkaale
      181 vikkimkmde aqpfsvpvdp valgksdyfn vidtpmdfgt icsnlenstk ymntkdvfnd
      241 vqyiwencck cnqkgeyivy lmkrvkkkfm kywiaaglsi gqsgksnvgt sfepsttdya
      301 trhrghepfy pvgsadgasq mqqgqlgfnq hhlyfpsscy iqphqlpqpp psttrpqfsq
      361 lspvsyhqhh qsqhpppstn qpqfsqlqsh tgyshfqppg diapkhkkqa skkhkknsst
      421 gpaasilsgs pgqsqqphls yklpyglqqy qhsinrlqss qlqgavdggh shflpqsdyt
      481 rshgyvpyyp vdpmvvpgqs hpqqsrlsdg essesqerql kashcqpqss qlqhnvdieh
      541 shtsltdsal raircalrys aspktnksnq enqgplgctk sqpeqspqrp eqrqftkkrk
      601 grgptrclfl ndladgerif vhinkfgqpv gpnssklssf lgtvarnghr aplnfidwra
      661 lpdsykddmw eyvqtkfdvd psgkswvmqs iatkwrdwka dlkatyydsl ntdeerlkvs
      721 dprvvpdqwp slisywnsed tkrcarnran rqkhtcghss gtksyarice eeqnkrpdgk
      781 eptraelyil thtrkngqpv ddtaaklisk iheqeakkqn tsqcsdesnd tlcqvmgeeq
      841 gknvgpygmg pnrtgifgpr pgrvvlarma skaersanee vrkiavkmea meekyalmek
      901 niarmtsnme kflekiggss nilgseqrhh eeedpeedda
//
LOCUS       XP_016707499             932 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707499
VERSION     XP_016707499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852010.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..932
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=104759
     Region          173..272
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(198,205,208,248,252,259)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99922"
     Region          <494..>591
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          717..846
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     CDS             1..932
                     /gene="LOC107922141"
                     /coded_by="XM_016852010.2:331..3129"
                     /db_xref="GeneID:107922141"
ORIGIN      
        1 mrtkqkracr kpparksaal aenveavkqg ekavnqseka vnqnerivnq seeaflsfin
       61 qnrkgdsvsa dsndlevvdl dsdeaksnss lsssssdsde sfsaeesstd dsssvdrrsr
      121 kstkrhgnvk qeasklpnkg rkddvnssrv lhsfgkkhde ykmseqdpry ntkelkaale
      181 vikkimkmde aqpfsvpvdp valgksdyfn vidtpmdfgt icsnlenstk ymntkdvfnd
      241 vqyiwencck cnqkgeyivy lmkrvkkkfm kywiaaglsi gqsgksnvgt sfepsttdya
      301 trhrghepfy pvgsadgasq mqqgqlgfnq hhlyfpsscy iqphqlpqpp psttrpqfsq
      361 lspvsyhqhh qsqhpppstn qpqfsqlqsh tgyshfqppg diapkhkkqa skkhkknsst
      421 gpaasilsgs pgqsqqphls yklpyglqqy qhsinrlqss qlqgavdgdy trshgyvpyy
      481 pvdpmvvpgq shpqqsrlsd gessesqerq lkashcqpqs sqlqhnvdie hshtsltdsa
      541 lraircalry saspktnksn qenqgplgct ksqpeqspqr peqrqftkkr kgrgptrclf
      601 lndladgeri fvhinkfgqp vgpnssklss flgtvarngh raplnfidwr alpdsykddm
      661 weyvqtkfdv dpsgkswvmq siatkwrdwk adlkatyyds lntdeerlkv sdprvvpdqw
      721 pslisywnse dtkkrcarnr anrqkhtcgh ssgtksyari ceeeqnkrpd gkeptraely
      781 ilthtrkngq pvddtaakli skiheqeakk qntsqcsdes ndtlcqvmge eqgknvgpyg
      841 mgpnrtgifg prpgrvvlar maskaersan eevrkiavkm eameekyalm ekniarmtsn
      901 mekflekigg ssnilgseqr hheeedpeed da
//
LOCUS       XP_040943448             931 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943448
VERSION     XP_040943448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087514.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..931
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=104631
     Region          173..272
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(198,205,208,248,252,259)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99932"
     Region          <494..>591
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          717..845
                     /region_name="Transposase_24"
                     /note="Plant transposase (Ptta/En/Spm family); pfam03004"
                     /db_xref="CDD:367291"
     CDS             1..931
                     /gene="LOC107922141"
                     /coded_by="XM_041087514.1:327..3122"
                     /db_xref="GeneID:107922141"
ORIGIN      
        1 mrtkqkracr kpparksaal aenveavkqg ekavnqseka vnqnerivnq seeaflsfin
       61 qnrkgdsvsa dsndlevvdl dsdeaksnss lsssssdsde sfsaeesstd dsssvdrrsr
      121 kstkrhgnvk qeasklpnkg rkddvnssrv lhsfgkkhde ykmseqdpry ntkelkaale
      181 vikkimkmde aqpfsvpvdp valgksdyfn vidtpmdfgt icsnlenstk ymntkdvfnd
      241 vqyiwencck cnqkgeyivy lmkrvkkkfm kywiaaglsi gqsgksnvgt sfepsttdya
      301 trhrghepfy pvgsadgasq mqqgqlgfnq hhlyfpsscy iqphqlpqpp psttrpqfsq
      361 lspvsyhqhh qsqhpppstn qpqfsqlqsh tgyshfqppg diapkhkkqa skkhkknsst
      421 gpaasilsgs pgqsqqphls yklpyglqqy qhsinrlqss qlqgavdgdy trshgyvpyy
      481 pvdpmvvpgq shpqqsrlsd gessesqerq lkashcqpqs sqlqhnvdie hshtsltdsa
      541 lraircalry saspktnksn qenqgplgct ksqpeqspqr peqrqftkkr kgrgptrclf
      601 lndladgeri fvhinkfgqp vgpnssklss flgtvarngh raplnfidwr alpdsykddm
      661 weyvqtkfdv dpsgkswvmq siatkwrdwk adlkatyyds lntdeerlkv sdprvvpdqw
      721 pslisywnse dtkrcarnra nrqkhtcghs sgtksyaric eeeqnkrpdg keptraelyi
      781 lthtrkngqp vddtaaklis kiheqeakkq ntsqcsdesn dtlcqvmgee qgknvgpygm
      841 gpnrtgifgp rpgrvvlarm askaersane evrkiavkme ameekyalme kniarmtsnm
      901 ekflekiggs snilgseqrh heeedpeedd a
//
LOCUS       XP_016707991             448 aa            linear   PLN 06-AUG-2024
DEFINITION  histone lysine acetyltransferase CREBBP isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707991
VERSION     XP_016707991.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852502.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707991.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..448
                     /product="histone lysine acetyltransferase CREBBP isoform
                     X1"
                     /calculated_mol_wt=49406
     Region          183..292
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(218,225,228,268,272,279)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99932"
     CDS             1..448
                     /gene="LOC107922455"
                     /coded_by="XM_016852502.2:208..1554"
                     /db_xref="GeneID:107922455"
ORIGIN      
        1 mkrkrghkkg nkakanaaal vapnegtgnv asvntddnsv nddyesgmev dtpsstrtdp
       61 afnvtsvnpd ssvdkavgks vgrvkvklkt sskvlesdvp shsdtdkssp qvgferqggv
      121 yekmedsans saemkmgvss svsrkagsik ikssrmlags nadksgnvig eeressfqke
      181 akmprlgsry nkqeldsalt vikkvmkmea aapfnepvnp ealgipdyfd iidtpmdfgt
      241 icnnfesgdk ymdsedvfkd vqyiwdncck ynnkgdaild lmrrvkknfm kywtaaglyt
      301 ehskgangae ggdvedssqg kmqiksgqsk lknrkhgrch ksdclcaicv lkrrkrerea
      361 narmakghsg vldllqeefs pvgspygeds slnmdesvdp yadaevegeg ekvkgevseh
      421 riavwrrgmr rrkmmgkkrk rrmrkktr
//
LOCUS       XP_040943449             376 aa            linear   PLN 06-AUG-2024
DEFINITION  bromodomain testis-specific protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943449
VERSION     XP_040943449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087515.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..376
                     /product="bromodomain testis-specific protein isoform X2"
                     /calculated_mol_wt=41260
     Region          191..293
                     /region_name="Bromodomain_1"
                     /note="Bromodomain; uncharacterized subfamily.
                     Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cd05494"
                     /db_xref="CDD:99926"
     CDS             1..376
                     /gene="LOC107922455"
                     /coded_by="XM_041087515.1:204..1334"
                     /db_xref="GeneID:107922455"
ORIGIN      
        1 mkrkrghkkg nkakanaaal vapnegtgnv asvntddnsv nddyesgmev dtpsstrtdp
       61 afnvtsvnpd ssvdkavgks vgrvkvklkt sskvlesdvp shsdtdkssp qvgferqggv
      121 yekmedsans saemkmgvss svsrkagsik ikssrmlags nadksgnvig eeressfqke
      181 akmprlgsry nkqeldsalt vikkvmkmea aapfnepvnp ealgipdyfd iidtpmdfgt
      241 icnnfesgdk ymdsedvfkd vqyiwdncck ynnkgdaild lmrrvkknfm kywtaaglyt
      301 ehskgangae ggdvedssqg kmqiksgqsk lknrkhgdar esarqmlewl kvileswisc
      361 krnfhllvvl mvkihh
//
LOCUS       XP_016706444             370 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA pseudouridine synthase A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706444
VERSION     XP_016706444.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..370
                     /product="tRNA pseudouridine synthase A isoform X1"
                     /calculated_mol_wt=41482
     Region          54..367
                     /region_name="PseudoU_synth_EcTruA"
                     /note="Eukaryotic and bacterial pseudouridine synthases
                     similar to E. coli TruA; cd02570"
                     /db_xref="CDD:211337"
     Site            order(55,137,140..142,146..150)
                     /site_type="other"
                     /note="dimerization interface 3.5A [polypeptide binding]"
                     /db_xref="CDD:211337"
     Site            order(95..98,320)
                     /site_type="active"
                     /db_xref="CDD:211337"
     CDS             1..370
                     /gene="LOC107921089"
                     /coded_by="XM_016850955.2:347..1459"
                     /db_xref="GeneID:107921089"
ORIGIN      
        1 mekrlnemtg sptesrpski lksqghtdqd kedkqlqdls msknpriqry lvaieyigtr
       61 fsgsqqqpnc rtvvgvleea fhkfigqpvs ifcssrtdag vhalsnvchv dveriskrkp
      121 gevlppheps vvrravnhfl qknegdisvi dvrcvpndfh arfkaqerty fyrlvsgsep
      181 lstfekeraw hvpekldlna mqeackvlvg hhdfssfraa gcqanspirt ldelhvcevp
      241 atpyfpsite reqnnsslkd shtcsvkpdv elpinsfsnt ndmvdtnngk snleefgirr
      301 rhrsyvvtar arsflyhqvr llvgvlkcvg tgelttsdve rimnaktvta aspmapacgl
      361 ylgrvkydlp
//
LOCUS       XP_016706445             369 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA pseudouridine synthase A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706445
VERSION     XP_016706445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850956.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="tRNA pseudouridine synthase A isoform X2"
                     /calculated_mol_wt=41354
     Region          54..366
                     /region_name="PseudoU_synth_EcTruA"
                     /note="Eukaryotic and bacterial pseudouridine synthases
                     similar to E. coli TruA; cd02570"
                     /db_xref="CDD:211337"
     Site            order(55,137,140..142,145..149)
                     /site_type="other"
                     /note="dimerization interface 3.5A [polypeptide binding]"
                     /db_xref="CDD:211337"
     Site            order(95..98,319)
                     /site_type="active"
                     /db_xref="CDD:211337"
     CDS             1..369
                     /gene="LOC107921089"
                     /coded_by="XM_016850956.2:325..1434"
                     /db_xref="GeneID:107921089"
ORIGIN      
        1 mekrlnemtg sptesrpski lksqghtdqd kedkqlqdls msknpriqry lvaieyigtr
       61 fsgsqqqpnc rtvvgvleea fhkfigqpvs ifcssrtdag vhalsnvchv dveriskrkp
      121 gevlppheps vvrravnhfl qnegdisvid vrcvpndfha rfkaqertyf yrlvsgsepl
      181 stfekerawh vpekldlnam qeackvlvgh hdfssfraag cqanspirtl delhvcevpa
      241 tpyfpsiter eqnnsslkds htcsvkpdve lpinsfsntn dmvdtnngks nleefgirrr
      301 hrsyvvtara rsflyhqvrl lvgvlkcvgt gelttsdver imnaktvtaa spmapacgly
      361 lgrvkydlp
//
LOCUS       XP_016707223             131 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707223
VERSION     XP_016707223.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851734.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..131
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15141
     CDS             1..131
                     /gene="LOC107921930"
                     /coded_by="XM_016851734.2:124..519"
                     /db_xref="GeneID:107921930"
ORIGIN      
        1 mhalavihlk defpetyvqt wytkqtqlqi ysnfirpvrg pkqwaslsnm lpilpptlrr
       61 ppgrlikvrr kepdepqttk rfsmrgvdmr cskykrighn krsckgevgq nipvkrhkvg
      121 vptqqqatpn q
//
LOCUS       XP_016708084            1008 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat receptor-like serine/threonine-protein kinase
            BAM2 [Gossypium hirsutum].
ACCESSION   XP_016708084
VERSION     XP_016708084.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852595.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1008
                     /product="leucine-rich repeat receptor-like
                     serine/threonine-protein kinase BAM2"
                     /calculated_mol_wt=110412
     Region          27..989
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          237..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          262..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          286..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          334..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..427
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          430..453
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          454..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          529..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          553..574
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          577..598
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1008
                     /gene="LOC107922516"
                     /coded_by="XM_016852595.2:533..3559"
                     /db_xref="GeneID:107922516"
ORIGIN      
        1 mleglnpfvf astpsklnpl etyflkpnmf plivftllsh ltisscsasl hadfhvlval
       61 kngfqfpepl lsswnssnps svcswsgvqc yggrvvsldl tdmnmcgyvs pqvsrldklt
      121 nlslagnnft gnieianisd lrflnisnnq fnghldwnya sisnlevfda ynnnftavlp
      181 vgvvglkklr yldlggnyfy gtippsygtl vgleylslag ndlngkipge lgnlvnlrei
      241 ylgyynvfqg gipselgnlv nlvhmdlssc eldgpiphel gklqlldtly lhinllsgpi
      301 pkqlgnvtnl vnldlshnal sgeippeftn lkqlrllnlf mntlhgsiph lvadlpnlet
      361 lglwmnnftg vipenlgrnr rlqvldlssn kltgtipphl casnelrilv lmknflfgsi
      421 peelgrcysl trvrlgqnyl ngtipngfiy lpqlnlaelh nnylsgtlae ngnmsskpvk
      481 lgqlnlsnnl lsgplpssls nlssleilll sgnqfsgpip psigelmqvl kldvsrnsls
      541 giippeignc fhltyldmsl nnlsgsiple isdlhilsyl nvsrnhlneg ipksigsmks
      601 lnvadfsfnn fsgklpesgq favfngssfa gnpqlcgsll nnpcnfsavt stprkaprdf
      661 klifalglli cslifataai ikakslkkng snswkmtafq nleftvseil dcvkdgnvig
      721 rggagivyhg kmpngmeiav kkllglgtsr hdhgfqaeiq tlgnirhrni vrllafcsnk
      781 etnllvyeym rngslgealh gkkkgaflgw nlrykiavea akglcylhhd csplivhrdv
      841 ksnnilldss feahvadfgl akflvdggas ecmsaiagsy gyiapeyayt lrvdeksdvy
      901 sfgvvllemi tgrkpvgefg egvdivqwak rstncrreev snivdrrlts vpkdeamhll
      961 fiamlcvqen sierptmrev vqmlsefarh sldsqsssss ssfiqkkf
//
LOCUS       XP_016707731             603 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein At4g24290 [Gossypium hirsutum].
ACCESSION   XP_016707731
VERSION     XP_016707731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852242.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..603
                     /product="MACPF domain-containing protein At4g24290"
                     /calculated_mol_wt=67338
     Region          105..317
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..603
                     /gene="LOC107922280"
                     /coded_by="XM_016852242.2:503..2314"
                     /db_xref="GeneID:107922280"
ORIGIN      
        1 malkstapka aeiaigsigc gydigmdlrl kyckgnskds clieihedgr heivlpggvs
       61 ipnvsksikc dkgertrfrs dvlsfqqmse qfnqeisltg kipsglfnsm fefsgcwqkd
      121 aantktlsfd gvfitlysva leksqivlrd hvkkavpstw epaalarfid tygthiivgv
      181 kmggkdviyi kqqhsstlqp adiqkrlkdm adkrfldasg hynlapeqvf qsdkfeireq
      241 rlrfasnsps ssyaqkedii siykrrggsd nrnlshndwl qtvqsepdvi smsfipitsl
      301 lngvpgsgfl shainlylry kppveelhqf lefqlprqwa pvfselplgp qrkqqstasl
      361 qfsfmgpklf vnttpvdvgk rpvtglrlyl egkrsnrlai hlqhlsslpk ifqlvddpkg
      421 nfcqeshdrk yyervywkny shvctapies qeelsivtga qlqvenhgfk nilflrlcfs
      481 tvlgamsikh pewdgsprla pksglistli shhfttvqkp ppgpadlnin savypggppv
      541 pvqapkllkf vdtteitrgp qevpgywvvs garlvvkkgr isllvkysll tallpdeddi
      601 deh
//
LOCUS       XP_016707733             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707733
VERSION     XP_016707733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15293
     CDS             1..142
                     /gene="LOC107922281"
                     /coded_by="XM_016852244.2:585..1013"
                     /db_xref="GeneID:107922281"
ORIGIN      
        1 mnefgtgrsv pwniypssdp tpsqpvvdke tplknlgtsm naisfgfvat ailismfvim
       61 aifehlfqpn pafsspnqdg avgsgaaekl gnpqrastsy atdlsvvmpg eqhptyiaql
      121 aplpcpregi ywpphernfv yp
//
LOCUS       XP_016707735             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707735
VERSION     XP_016707735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852246.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15293
     CDS             1..142
                     /gene="LOC107922281"
                     /coded_by="XM_016852246.2:134..562"
                     /db_xref="GeneID:107922281"
ORIGIN      
        1 mnefgtgrsv pwniypssdp tpsqpvvdke tplknlgtsm naisfgfvat ailismfvim
       61 aifehlfqpn pafsspnqdg avgsgaaekl gnpqrastsy atdlsvvmpg eqhptyiaql
      121 aplpcpregi ywpphernfv yp
//
LOCUS       XP_016707732             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707732
VERSION     XP_016707732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15293
     CDS             1..142
                     /gene="LOC107922281"
                     /coded_by="XM_016852243.2:1091..1519"
                     /db_xref="GeneID:107922281"
ORIGIN      
        1 mnefgtgrsv pwniypssdp tpsqpvvdke tplknlgtsm naisfgfvat ailismfvim
       61 aifehlfqpn pafsspnqdg avgsgaaekl gnpqrastsy atdlsvvmpg eqhptyiaql
      121 aplpcpregi ywpphernfv yp
//
LOCUS       XP_016707734             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707734
VERSION     XP_016707734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852245.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15293
     CDS             1..142
                     /gene="LOC107922281"
                     /coded_by="XM_016852245.2:240..668"
                     /db_xref="GeneID:107922281"
ORIGIN      
        1 mnefgtgrsv pwniypssdp tpsqpvvdke tplknlgtsm naisfgfvat ailismfvim
       61 aifehlfqpn pafsspnqdg avgsgaaekl gnpqrastsy atdlsvvmpg eqhptyiaql
      121 aplpcpregi ywpphernfv yp
//
LOCUS       XP_016707736             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707736
VERSION     XP_016707736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15293
     CDS             1..142
                     /gene="LOC107922281"
                     /coded_by="XM_016852247.2:132..560"
                     /db_xref="GeneID:107922281"
ORIGIN      
        1 mnefgtgrsv pwniypssdp tpsqpvvdke tplknlgtsm naisfgfvat ailismfvim
       61 aifehlfqpn pafsspnqdg avgsgaaekl gnpqrastsy atdlsvvmpg eqhptyiaql
      121 aplpcpregi ywpphernfv yp
//
LOCUS       XP_016706466             577 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein At4g24290 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706466
VERSION     XP_016706466.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850977.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..577
                     /product="MACPF domain-containing protein At4g24290
                     isoform X1"
                     /calculated_mol_wt=64778
     Region          105..296
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..577
                     /gene="LOC107921106"
                     /coded_by="XM_016850977.2:312..2045"
                     /db_xref="GeneID:107921106"
ORIGIN      
        1 malkisaqea aeiaigsigs gynlaldlrl kycqeeekgs pliefeqvgc ydvalpggis
       61 ipnvsklikc yqgngtrnmc dvisfqqmse rfnhelslsg kipsglfnam fdfsgcshkd
      121 avstktlafd gifitlytvl ldksqmvlcd hvkkavpssw epaalarfik tfgthiivgv
      181 kmggkdviyv kqqhsstvqp tdaytklkkl addkflknne qsrinseqvk lynqmqdisi
      241 iykrrggree mnlshaewlq tvdvhpevvs msfipitsll sgvpmsgfln haidlylryk
      301 psleelhlfl efslprrwap vfdefprglq hkrqsnsflq fkflgpklyv ntipvdvgmr
      361 pvtglrlyle gkrsnrlaiy mqhlsslpty fqlvdepndt lpdeesydkr ylvkvrwknf
      421 srvctapvec ynnnsivtga qvqvekhglk silflrlhfs tvlgtvilsr sewdgsfgia
      481 pqsgilsdll skpltppppq rkpdtscsvy pggppmpnyt pkllkyvdta emkrgpqdpp
      541 gywvvsgarl vveegkialr vkysllidip deipeeh
//
LOCUS       XP_016706467             498 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein At4g24290 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706467
VERSION     XP_016706467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850978.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="MACPF domain-containing protein At4g24290
                     isoform X2"
                     /calculated_mol_wt=56358
     Region          26..217
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..498
                     /gene="LOC107921106"
                     /coded_by="XM_016850978.2:785..2281"
                     /db_xref="GeneID:107921106"
ORIGIN      
        1 mlslfsrqms erfnhelsls gkipsglfna mfdfsgcshk davstktlaf dgifitlytv
       61 lldksqmvlc dhvkkavpss wepaalarfi ktfgthiivg vkmggkdviy vkqqhsstvq
      121 ptdaytklkk laddkflknn eqsrinseqv klynqmqdis iiykrrggre emnlshaewl
      181 qtvdvhpevv smsfipitsl lsgvpmsgfl nhaidlylry kpsleelhlf lefslprrwa
      241 pvfdefprgl qhkrqsnsfl qfkflgpkly vntipvdvgm rpvtglrlyl egkrsnrlai
      301 ymqhlsslpt yfqlvdepnd tlpdeesydk rylvkvrwkn fsrvctapve cynnnsivtg
      361 aqvqvekhgl ksilflrlhf stvlgtvils rsewdgsfgi apqsgilsdl lskpltpppp
      421 qrkpdtscsv ypggppmpny tpkllkyvdt aemkrgpqdp pgywvvsgar lvveegkial
      481 rvkysllidi pdeipeeh
//
LOCUS       XP_040943450             498 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein At4g24290 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943450
VERSION     XP_040943450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087516.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="MACPF domain-containing protein At4g24290
                     isoform X2"
                     /calculated_mol_wt=56358
     Region          26..217
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..498
                     /gene="LOC107921106"
                     /coded_by="XM_041087516.1:553..2049"
                     /db_xref="GeneID:107921106"
ORIGIN      
        1 mlslfsrqms erfnhelsls gkipsglfna mfdfsgcshk davstktlaf dgifitlytv
       61 lldksqmvlc dhvkkavpss wepaalarfi ktfgthiivg vkmggkdviy vkqqhsstvq
      121 ptdaytklkk laddkflknn eqsrinseqv klynqmqdis iiykrrggre emnlshaewl
      181 qtvdvhpevv smsfipitsl lsgvpmsgfl nhaidlylry kpsleelhlf lefslprrwa
      241 pvfdefprgl qhkrqsnsfl qfkflgpkly vntipvdvgm rpvtglrlyl egkrsnrlai
      301 ymqhlsslpt yfqlvdepnd tlpdeesydk rylvkvrwkn fsrvctapve cynnnsivtg
      361 aqvqvekhgl ksilflrlhf stvlgtvils rsewdgsfgi apqsgilsdl lskpltpppp
      421 qrkpdtscsv ypggppmpny tpkllkyvdt aemkrgpqdp pgywvvsgar lvveegkial
      481 rvkysllidi pdeipeeh
//
LOCUS       XP_040943451             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943451
VERSION     XP_040943451.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087517.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..168
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18610
     CDS             1..168
                     /gene="LOC121213971"
                     /coded_by="XM_041087517.1:109..615"
                     /db_xref="GeneID:121213971"
ORIGIN      
        1 mnghsyskik gtdvvdqssr smessdlivp fpqtskstsn pipeesikns kpntqcpsvq
       61 dgdddddeaq gtngempvpt lrrnssvsaa yalqlqaavk rafpmrrsss vsesycrihd
      121 qyvtlappld dddesditgt rrsvrkknnn yknrrdkilk awkkifgl
//
LOCUS       XP_016707139             277 aa            linear   PLN 06-AUG-2024
DEFINITION  LOB domain-containing protein 42 [Gossypium hirsutum].
ACCESSION   XP_016707139
VERSION     XP_016707139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851650.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..277
                     /product="LOB domain-containing protein 42"
                     /calculated_mol_wt=30507
     Region          60..163
                     /region_name="LOB"
                     /note="Lateral organ boundaries (LOB) domain; pfam03195"
                     /db_xref="CDD:460843"
     CDS             1..277
                     /gene="LOC107921805"
                     /coded_by="XM_016851650.2:149..982"
                     /db_xref="GeneID:107921805"
ORIGIN      
        1 mgrqfantls hlrfsglllh hsfgdhcapl ppalykpssp yilsislski ipklitmrms
       61 cngcrvlrkg csqnciirpc lqwikspdsq anatlflakf ygragllnli eagpenlrpa
      121 ifmsllyeac grvvnpvygs vgmlwsrnwv ecqaavdavl kgsqitetss seslaqqsis
      181 plktydirhv fkdpntidid kvksrtsfkr satkskrhvd skedasmfsv eteegslvtq
      241 tkkgpllklg nqteeianir leltlglapa tmqlprl
//
LOCUS       XP_016706213             578 aa            linear   PLN 06-AUG-2024
DEFINITION  prolycopene isomerase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706213
VERSION     XP_016706213.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706213.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..578
                     /product="prolycopene isomerase, chloroplastic"
                     /calculated_mol_wt=62311
     Region          58..563
                     /region_name="COG1233"
                     /note="Phytoene dehydrogenase-related protein [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:440846"
     CDS             1..578
                     /gene="LOC107920901"
                     /coded_by="XM_016850724.2:149..1885"
                     /db_xref="GeneID:107920901"
ORIGIN      
        1 melglplfpg ikfptprntv larsspnnlp qfssnassst sisvkpptkt vpgkpeadvv
       61 vigsgigglc cagllarynq dvlvleshdl pggaahsfei kgykfdsgps lfsgfqsrgp
      121 qanplaqvld algesipcak ydswmvyipe aeflsrigpt eflkdlekya sqnavqewkk
      181 lleailplsa aamalpplsi rgdlgvista aaryapsllk sfvemgpqga fgapkllrpf
      241 teimdslelr dpfirnwvdl lafllagvks ngilsaemvy mfaewykpgc tleyplngsg
      301 aiiealvrgi qkfggrislg shvekiiven gkatgvklkg gqfirakmav vsnasmwdtl
      361 nllpkdqlpk syvdrvkttp qcesfmhlhl gfdaedvred lgihhlvvne wergvdadqn
      421 vvlisvpsvl spnlappgkh vlhaytpgte pfelwegldr rsaeykklka ersevmwkav
      481 eralgsgfnr dkcevklvgt plthqrflrr nrgtygpaiq agqgtfpghs tpipqlyccg
      541 dstfpgigvp avaasgaiva nslvsvsqhs qlldaigi
//
LOCUS       XP_016707839             422 aa            linear   PLN 06-AUG-2024
DEFINITION  shaggy-related protein kinase kappa [Gossypium hirsutum].
ACCESSION   XP_016707839
VERSION     XP_016707839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852350.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="shaggy-related protein kinase kappa"
                     /calculated_mol_wt=47718
     Region          79..371
                     /region_name="STKc_GSK3"
                     /note="The catalytic domain of the Serine/Threonine
                     Kinase, Glycogen Synthase Kinase 3; cd14137"
                     /db_xref="CDD:271039"
     Site            order(90..94,98,111,113,124,138,159..162,165,167..168,209,
                     211,213..214,216,228,231,242,244..247,249,287)
                     /site_type="active"
                     /db_xref="CDD:271039"
     Site            order(90..93,98,111,113,138,159..162,165,211,213..214,216,
                     228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271039"
     Site            order(94..95,240..248,256..257,288..292,294..295,299,
                     319..322)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271039"
     Site            order(124,167,209,211,231,242,244..247,249,287)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271039"
     Site            order(227..237,239..249)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271039"
     Site            order(256,291..292,294..295,298..299,319..324)
                     /site_type="other"
                     /note="axin binding site [polypeptide binding]"
                     /db_xref="CDD:271039"
     CDS             1..422
                     /gene="LOC107922354"
                     /coded_by="XM_016852350.2:397..1665"
                     /db_xref="GeneID:107922354"
ORIGIN      
        1 masaslgngg vgssrsvngf ksssssvdwl gremlemrlr dkvdhdedrd sepevvdgvg
       61 aetghvirtt iggrngqskq nvsyiaehav gtgsfgvvfq akcretgeiv aikkvlqdkr
      121 yknrelqimq mldhpnivsl khyffsktdk delylnlvld yvpetvhrta rsysrmntrm
      181 pliyvklyty qicralayih ncigichrdi kpqnllvnph thqlklcdfg sakvlvkgep
      241 nvsyicsryy rapelifgat eyttaidiws tgcvmaelll gqplfpgesg vdqlveiikv
      301 lgtptreeik cmnpnytefk fpqikphpwh kvfqkrlppe avdlvcrffq yspnlrctal
      361 eacihpffde lrdpntrlpn grplpplfnf kpqelsgvpp dvvkklipeh arkqnlfmal
      421 ha
//
LOCUS       XP_040943452             422 aa            linear   PLN 06-AUG-2024
DEFINITION  shaggy-related protein kinase kappa [Gossypium hirsutum].
ACCESSION   XP_040943452
VERSION     XP_040943452.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087518.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="shaggy-related protein kinase kappa"
                     /calculated_mol_wt=47718
     Region          79..371
                     /region_name="STKc_GSK3"
                     /note="The catalytic domain of the Serine/Threonine
                     Kinase, Glycogen Synthase Kinase 3; cd14137"
                     /db_xref="CDD:271039"
     Site            order(90..94,98,111,113,124,138,159..162,165,167..168,209,
                     211,213..214,216,228,231,242,244..247,249,287)
                     /site_type="active"
                     /db_xref="CDD:271039"
     Site            order(90..93,98,111,113,138,159..162,165,211,213..214,216,
                     228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271039"
     Site            order(94..95,240..248,256..257,288..292,294..295,299,
                     319..322)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271039"
     Site            order(124,167,209,211,231,242,244..247,249,287)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271039"
     Site            order(227..237,239..249)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271039"
     Site            order(256,291..292,294..295,298..299,319..324)
                     /site_type="other"
                     /note="axin binding site [polypeptide binding]"
                     /db_xref="CDD:271039"
     CDS             1..422
                     /gene="LOC107922354"
                     /coded_by="XM_041087518.1:401..1669"
                     /db_xref="GeneID:107922354"
ORIGIN      
        1 masaslgngg vgssrsvngf ksssssvdwl gremlemrlr dkvdhdedrd sepevvdgvg
       61 aetghvirtt iggrngqskq nvsyiaehav gtgsfgvvfq akcretgeiv aikkvlqdkr
      121 yknrelqimq mldhpnivsl khyffsktdk delylnlvld yvpetvhrta rsysrmntrm
      181 pliyvklyty qicralayih ncigichrdi kpqnllvnph thqlklcdfg sakvlvkgep
      241 nvsyicsryy rapelifgat eyttaidiws tgcvmaelll gqplfpgesg vdqlveiikv
      301 lgtptreeik cmnpnytefk fpqikphpwh kvfqkrlppe avdlvcrffq yspnlrctal
      361 eacihpffde lrdpntrlpn grplpplfnf kpqelsgvpp dvvkklipeh arkqnlfmal
      421 ha
//
LOCUS       XP_040943453             109 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 6-like [Gossypium hirsutum].
ACCESSION   XP_040943453
VERSION     XP_040943453.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087519.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="DEAD-box ATP-dependent RNA helicase 6-like"
                     /calculated_mol_wt=11993
     Region          21..>91
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            65..71
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..109
                     /gene="LOC121213974"
                     /coded_by="XM_041087519.1:25..354"
                     /db_xref="GeneID:121213974"
ORIGIN      
        1 mppsdtrykt edvtatkgne fedyflkrel imgiyekgfe rpspiqeesi pialtgsdil
       61 arakngtgki aafcipalek idqdnnviqg lpdsvlrtta sksrefevv
//
LOCUS       XP_016707504             492 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 6 [Gossypium
            hirsutum].
ACCESSION   XP_016707504
VERSION     XP_016707504.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852015.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707504.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..492
                     /product="LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 6"
                     /calculated_mol_wt=55250
     Region          1..486
                     /region_name="PLN02377"
                     /note="3-ketoacyl-CoA synthase"
                     /db_xref="CDD:166018"
     CDS             1..492
                     /gene="LOC107922145"
                     /coded_by="XM_016852015.2:97..1575"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107922145"
ORIGIN      
        1 mphfsnsvkl kyvklgyqyl vnhiltltli pvmagvliev lrlgpaeivn lwnslhfdlv
       61 qilcscffii fvatvyfmsk prsiylvdya cykppvtcrv pfatfmehsr lnlsnnpksv
      121 efqmrilers glgeetclpp aihyipptpt meaargeaei vifsamdslf kktglkpkdi
      181 dilivncslf sptpslsamv inkyklrsni ksfnlsgmgc saglisidla rdllqvhpns
      241 navvvsteii tpnyyqgker amllpnclfr mggaaillsn rrserrraky rlvhvvrthk
      301 gaddkayrcv feeedkegnv gislskdlma iagealksni ttigplvlpa seqllflltl
      361 igrkifnpkw kpyipdfkqa fehfcihagg ravidelqkn lqlsaehvea srmtlhrfgn
      421 tsssslwyem syiexkgrmk kgdrvwqiaf gsgfkcnsav wkcnrtiktp kdgpwadcih
      481 rypvhipevv kl
//
LOCUS       XP_016706544             405 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein CONSTANS-LIKE 16 [Gossypium hirsutum].
ACCESSION   XP_016706544
VERSION     XP_016706544.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851055.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706544.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="zinc finger protein CONSTANS-LIKE 16"
                     /calculated_mol_wt=44435
     Region          18..61
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          349..391
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     CDS             1..405
                     /gene="LOC107921178"
                     /coded_by="XM_016851055.2:497..1714"
                     /db_xref="GeneID:107921178"
ORIGIN      
        1 misskkmana vgaktvracd scikkrarwy caaddaflcq acdssvhsan plarrhkrvr
       61 lktasvkssg delplesfsp swdrgftrka rtrrpvkgsi hrkplkaknn pvpvvpevgi
      121 deifdpfvae lctsttstea avsavgneae taateskafm gqdvdgshgl fpsemdlaef
      181 aadvesllgk glenesftmv elgltgskdl reysygngqv kiedeesfeg gmvrepfels
      241 fnydsppscg gvdelvkeev evkskeggec qentakkkkr ktllnldyea vitawatqgs
      301 pwtsggkpdl dpdecwpdcm gnggtevqqs ysgligmggq qqamgdggre arvsryrekr
      361 rtrlfskkir yevrklnaek rprmkgrfvk rasfltgpaf pllnk
//
LOCUS       XP_040943454             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943454
VERSION     XP_040943454.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087520.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=46957
     Region          104..199
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..423
                     /gene="LOC107920910"
                     /coded_by="XM_041087520.1:16..1287"
                     /db_xref="GeneID:107920910"
ORIGIN      
        1 meswnmfiin vyacysrgyi srssatkrqi rfsqkekref llcnnsdsll tvqttiwgrk
       61 tltrvalasa yviekhvasq mtasdtgggd eglsssprnr mkflcsyggk ilprpgdgkl
      121 kyvggetrml avpgdikfse imkkvndmve gdmilkflii pdeldalvtv ksdedvrhmv
      181 deyrrleseg tpklraflfp ssplvaenqm nfvdpyaieq ryieavngiv rpssnhtsgr
      241 ltpvnpnrpn fsisactspt saspdaslpm eplvsngnqh nkppmpkvrs spslyslstl
      301 hpqsnnnhsn hqvyqphhhs hqnhqqqhpy sgqsprtspd yrtekapgpy dfvrgamghs
      361 hvpvnrvysv grqnlgngyp mytgccdecl vyasgganrr gslstsgrlg khdspcprnh
      421 mle
//
LOCUS       XP_016706226             389 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706226
VERSION     XP_016706226.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850737.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706226.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..389
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=42548
     Region          70..165
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..389
                     /gene="LOC107920910"
                     /coded_by="XM_016850737.2:66..1235"
                     /db_xref="GeneID:107920910"
ORIGIN      
        1 mftrvilggi saaaaqqsgr svwgrktltr valasayvie khvasqmtas dtgggdegls
       61 ssprnrmkfl csyggkilpr pgdgklkyvg getrmlavpg dikfseimkk vndmvegdmi
      121 lkfliipdel dalvtvksde dvrhmvdeyr rlesegtpkl raflfpsspl vaenqmnfvd
      181 pyaieqryie avngivrpss nhtsgrltpv npnrpnfsis actsptsasp daslpmeplv
      241 sngnqhnkpp mpkvrsspsl yslstlhpqs nnnhsnhqvy qphhhshqnh qqqhpysgqs
      301 prtspdyrte kapgpydfvr gamghshvpv nrvysvgrqn lgngypmytg ccdeclvyas
      361 gganrrgsls tsgrlgkhds pcprnhmle
//
LOCUS       XP_040943455             306 aa            linear   PLN 06-AUG-2024
DEFINITION  MYB-like transcription factor EOBI [Gossypium hirsutum].
ACCESSION   XP_040943455
VERSION     XP_040943455.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087521.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="MYB-like transcription factor EOBI"
                     /calculated_mol_wt=34526
     Region          7..>142
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..306
                     /gene="LOC121213975"
                     /coded_by="XM_041087521.1:158..1078"
                     /db_xref="GeneID:121213975"
ORIGIN      
        1 mraamppint knmstpleee selrrgpwtl eedtllthyi arhgegrwnm lakcaglkrt
       61 gkscrlrwln ylkpdikrgn ltpqeqllil elhskwgnrw skiaqhlpgr tdneiknywr
      121 trvqkqarql niesnsqrfl davrcfwmpr lvqkveqasp ssssssssss sylkemctqs
      181 svpsqlsscc tvpsfptvsp lankttdisn sssvttqnic ptdsinnisd qteipqhltg
      241 snvyghttld qcynidsndy gmegisfasi sgvgfyegtp segnwmcnem sddlwnmddi
      301 wqlrsi
//
LOCUS       XP_016708276             431 aa            linear   PLN 06-AUG-2024
DEFINITION  GTP-binding protein ERG [Gossypium hirsutum].
ACCESSION   XP_016708276
VERSION     XP_016708276.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708276.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..431
                     /product="GTP-binding protein ERG"
                     /calculated_mol_wt=49560
     Region          142..430
                     /region_name="era"
                     /note="GTPase Era; Reviewed; PRK00089"
                     /db_xref="CDD:234624"
     CDS             1..431
                     /gene="LOC107922660"
                     /coded_by="XM_016852787.2:201..1496"
                     /db_xref="GeneID:107922660"
ORIGIN      
        1 mnttkkalta vthltslypr rlhtfhhhrl fyrlfsaqpq qrqddsddsh pnnsaisdfd
       61 saqfsipdal rttpqqptwd vhhrqrveri fsngdlrhrk vkeeeeeeee esrrrilaka
      121 lleaalegpd edadqdqevk eedqkslsvg iigapnagks altnfmvgtk vaavsrktnt
      181 tthevlgvmt kgdtqicffd tpglmlnrsg ylhkdmkvrv esawssvnly dvlmvifdvh
      241 rhltkpdsrv irlikrmgee pnpkqirilc mnkvdliekk kellkvaeqf kdlpgygrif
      301 misglkgsgv edltkylmeq avqrpwdedp itmseevmkn islevvrerl ldhvhqeipy
      361 gidhrlvdwk elrdgslrie hhfitskmsq rkilvgkngs kigrigiean eelrsifkre
      421 vhlilqvrvk t
//
LOCUS       XP_016706757             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706757
VERSION     XP_016706757.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851268.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28570
     CDS             1..258
                     /gene="LOC107921413"
                     /coded_by="XM_016851268.2:235..1011"
                     /db_xref="GeneID:107921413"
ORIGIN      
        1 maieilaeis sprisfsddl dqedgvdsie echhqrldts llnptsdfdf cfvnnsfvqe
       61 lpsadelfsn gkirpieike kavvanqvrr qlqpgavvrs spqqfktdnp ekkrlkefll
      121 msideddkpa ssksfwqfnr ssslncessr skslirslqf ltrsnstgst pipketqkqp
      181 sltrrssvss sssgtlyyty ygnstqkpal kkscgahgng vrvspilnlp npiisnatvs
      241 ffgfgslfcn gktktkkr
//
LOCUS       XP_016707151             353 aa            linear   PLN 06-AUG-2024
DEFINITION  probable trehalose-phosphate phosphatase D [Gossypium hirsutum].
ACCESSION   XP_016707151
VERSION     XP_016707151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851662.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="probable trehalose-phosphate phosphatase D"
                     /calculated_mol_wt=39175
     Region          4..349
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(99..103,106..107,111,137..139,159,211,213,218,220,
                     222,252,254,256,265,290..291,294..295)
                     /site_type="active"
                     /db_xref="CDD:319767"
     Site            order(99..103,107,111,137..139,141,146..147,158..159,211,
                     213,218,220,252,254,256,258,265,290..292,294..295)
                     /site_type="active"
                     /note="active site pocket [active]"
                     /db_xref="CDD:319767"
     CDS             1..353
                     /gene="LOC107921821"
                     /coded_by="XM_016851662.1:110..1171"
                     /db_xref="GeneID:107921821"
ORIGIN      
        1 mtnqqnvvav dvkslglrnl lppvtkslsp telkmlfmkr feaekgdnki nglvdsmras
       61 sptriksssp sivhhpsals mleqivgask gkqivmfldy dgtlspived pdqafmstem
      121 raavrdvary fptaivtgrc rdkvysfvkl pglyyagshg mdikgpskrc knkksnpgil
      181 fqpaseflpm idevykalve rtksiggakv ennkfcvsvh frrvdekswg alaeqvrsvl
      241 nqypklkltq grkvleirpt ikwdkgrale fllaalgygn sndvlpiyig ddrtdedafk
      301 vlrdrgqgfg iivskvpket nasytlqeps evkeflrrlv dwkkyaqggg aap
//
LOCUS       XP_016708027             776 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-D-xylosidase 7 [Gossypium hirsutum].
ACCESSION   XP_016708027
VERSION     XP_016708027.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852538.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..776
                     /product="probable beta-D-xylosidase 7"
                     /calculated_mol_wt=85381
     Region          7..774
                     /region_name="PLN03080"
                     /note="Probable beta-xylosidase; Provisional"
                     /db_xref="CDD:178629"
     CDS             1..776
                     /gene="LOC107922477"
                     /coded_by="XM_016852538.2:38..2368"
                     /db_xref="GeneID:107922477"
ORIGIN      
        1 mklkypfvli histvvfila essrppfacd sshpltksyp fckptlpinq rvqdlisrlt
       61 ldekisqlvn sappiprlgi peyewwseal hgvayfptlh tgmslngtiq satsfpqvil
      121 taasfdvhlc yrigqavgre araiynagqa tgmtfwapni nifrdprwgr gqetpgedpv
      181 vtgkyavsfv rgiqgdtfea gklghhlqas acckhftayd ldnwkgvnrf vfnakvslqd
      241 ladtymppfr scieegkasg imcaynrvng vpncadynll sktaraqwgf ngyitsdcda
      301 vsiiheeqgy aklpedavad vlkagmdvnc gnylknytks avvkrklpis eidralhnlf
      361 svrmrlglfd gnplqqpfgk igpdqvcsqe hqnlaleaar nsivllknny rllpfskakt
      421 aslavigpna nsaktllgny agppcktvtp lqglqryvkd ityhpgcnav ncsyvltdqa
      481 vkvakgaeyv vlvmgldqtq ereeldrvdl vlspkqqnli sivaraaknp vvlvllsggp
      541 vdisfakydk higsilwagy pgeagglala eiifgdhnpg grlpvtwypq sfvkvpmtdm
      601 rmrpepssgy pgrtyrfyqg qkvfefgygl sysnysyefl pvaqntvyln hpvkspkael
      661 ensnalkhvp vseigtelcs kripvtvraq nhgdmagrhp lllfvrsaka gngrpekqlv
      721 afqsvilnag eradvefels pcehlstane dglmvieegs hflsiedkes eitvil
//
LOCUS       XP_016708028             404 aa            linear   PLN 06-AUG-2024
DEFINITION  metallophosphoesterase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708028
VERSION     XP_016708028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852539.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..404
                     /product="metallophosphoesterase 1 isoform X1"
                     /calculated_mol_wt=44830
     Region          58..347
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(62,64,103,141..142,252,321)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(62,64,103,141,252,321)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
     CDS             1..404
                     /gene="LOC107922478"
                     /coded_by="XM_016852539.2:184..1398"
                     /db_xref="GeneID:107922478"
ORIGIN      
        1 mmaavawrsl lpvimisifm vyedwvsfps ckllpsttys pdkhvenvdd sledlkvmmv
       61 anllllgsea gfvnlyfrdy ymskffkksf qslnpdmllv lgdvsakgse lsrtkwlsvl
      121 hqfdnmlgpf ldlplhvilg drdvgecsgl cansvtwiar nfpgldssgc gafeisnisf
      181 vslnavallc gnnklrfdve kvieresvgl qmeiegmdet nngfgmfsem sndfrwrvna
      241 mksgsgpvll lhfplyrsgk thiwegstfk siidpsgkvp asaqregfsg tgpydlsqtv
      301 ppnateyifh alkpriifsa htqefsdhth pdgtrevtip amtwkvrddp gfivatfqrn
      361 ksavsvtycs varesrilia ytsavvlflf fivvsntlep kgls
//
LOCUS       XP_016708029             377 aa            linear   PLN 06-AUG-2024
DEFINITION  metallophosphoesterase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708029
VERSION     XP_016708029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852540.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="metallophosphoesterase 1 isoform X2"
                     /calculated_mol_wt=41930
     Region          58..347
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(62,64,103,141..142,252,321)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(62,64,103,141,252,321)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
     CDS             1..377
                     /gene="LOC107922478"
                     /coded_by="XM_016852540.2:100..1233"
                     /db_xref="GeneID:107922478"
ORIGIN      
        1 mmaavawrsl lpvimisifm vyedwvsfps ckllpsttys pdkhvenvdd sledlkvmmv
       61 anllllgsea gfvnlyfrdy ymskffkksf qslnpdmllv lgdvsakgse lsrtkwlsvl
      121 hqfdnmlgpf ldlplhvilg drdvgecsgl cansvtwiar nfpgldssgc gafeisnisf
      181 vslnavallc gnnklrfdve kvieresvgl qmeiegmdet nngfgmfsem sndfrwrvna
      241 mksgsgpvll lhfplyrsgk thiwegstfk siidpsgkvp asaqregfsg tgpydlsqtv
      301 ppnateyifh alkpriifsa htqefsdhth pdgtrevtip amtwkvrddp gfivatfqrn
      361 ksarcnsfar racivak
//
LOCUS       XP_016706248             371 aa            linear   PLN 06-AUG-2024
DEFINITION  short integuments 2, mitochondrial isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706248
VERSION     XP_016706248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850759.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="short integuments 2, mitochondrial isoform X1"
                     /calculated_mol_wt=41121
     Region          24..>241
                     /region_name="RbgA"
                     /note="Ribosome biogenesis GTPase RbgA [Translation,
                     ribosomal structure and biogenesis]; COG1161"
                     /db_xref="CDD:440775"
     CDS             1..371
                     /gene="LOC107920926"
                     /coded_by="XM_016850759.2:96..1211"
                     /db_xref="GeneID:107920926"
ORIGIN      
        1 mgkkgiikka mevgeigfsk dggainwfpg hmaaatrair srlklsdlvi evrdaripfs
       61 sanqdlqpql sakrlvialn kkdlansnvl nkwvryfdsc kqdclpisah srssvrklld
      121 lvelklkevi sreptllvmv vgvpnvgksa linsihqias trfplqekmk ratvgplpgv
      181 tqdiagykia hqpsiyvldt pgvlvpnipn ieiglklala gsvkdsvvge drivqylltv
      241 lntrgtplhw khlanpieet tqisedkpdy npkdirpkmk klpdasdlly vkdlvaevrh
      301 alyvtlsefg gniedendme clvehqyevl qkvlriphks sesrlmvskk fltlfrsgkl
      361 gsfvlddvpe s
//
LOCUS       XP_040943456             258 aa            linear   PLN 06-AUG-2024
DEFINITION  short integuments 2, mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943456
VERSION     XP_040943456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087522.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="short integuments 2, mitochondrial isoform X2"
                     /calculated_mol_wt=28661
     Region          <4..>128
                     /region_name="RbgA"
                     /note="Ribosome biogenesis GTPase RbgA [Translation,
                     ribosomal structure and biogenesis]; COG1161"
                     /db_xref="CDD:440775"
     CDS             1..258
                     /gene="LOC107920926"
                     /coded_by="XM_041087522.1:2332..3108"
                     /db_xref="GeneID:107920926"
ORIGIN      
        1 mpfqlldlve lklkevisre ptllvmvvgv pnvgksalin sihqiastrf plqekmkrat
       61 vgplpgvtqd iagykiahqp siyvldtpgv lvpnipniei glklalagsv kdsvvgedri
      121 vqylltvlnt rgtplhwkhl anpieettqi sedkpdynpk dirpkmkklp dasdllyvkd
      181 lvaevrhaly vtlsefggni edendmeclv ehqyevlqkv lriphksses rlmvskkflt
      241 lfrsgklgsf vlddvpes
//
LOCUS       XP_016706402             142 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein 5 alpha, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706402
VERSION     XP_016706402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850913.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="50S ribosomal protein 5 alpha, chloroplastic"
                     /calculated_mol_wt=15988
     Region          90..142
                     /region_name="Psrp5_CTD"
                     /note="C-terminal domain of Spinacia oleracea
                     chloroplastic PSRP5, and similar proteins; cd23709"
                     /db_xref="CDD:467922"
     Site            order(102..103,106,111,113..117,119,122..123,126..128,
                     130..135,138..142)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:467922"
     CDS             1..142
                     /gene="LOC107921058"
                     /coded_by="XM_016850913.2:236..664"
                     /db_xref="GeneID:107921058"
ORIGIN      
        1 malltfnplt clssspvrsc stslpivvlp isrlrvnrid dhcskcsigt qfvpskkrsv
       61 mtvkassast dgeeqvpaes kkedlpvgql pleskmqqma eqkmkmkmak kirlrrkrlv
      121 rkrklrkkgr wppskmkklk nv
//
LOCUS       XP_016706217            1005 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14L [Gossypium hirsutum].
ACCESSION   XP_016706217
VERSION     XP_016706217.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850728.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706217.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1005
                     /product="kinesin-like protein KIN-14L"
                     /calculated_mol_wt=111577
     Region          25..144
                     /region_name="CH_AtKIN14-like"
                     /note="calponin homology (CH) domain found in Arabidopsis
                     thaliana Kinesin-like KIN-14 protein family; cd21203"
                     /db_xref="CDD:409052"
     Site            order(25,29,97,99..100,103..104,106,113..121,131,133..134,
                     136..137,140..141,144)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409052"
     Region          <276..>344
                     /region_name="YkyA"
                     /note="Putative cell-wall binding lipoprotein; pfam10368"
                     /db_xref="CDD:431235"
     Region          346..675
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(356..357,430..437,542..543,579..584)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     Region          <691..902
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..1005
                     /gene="LOC107920903"
                     /coded_by="XM_016850728.2:269..3286"
                     /db_xref="GeneID:107920903"
ORIGIN      
        1 meyvtrtgfh dlnlasrkae eaalrryvav awletlvgpl gissqpseke fisclrngli
       61 lcnvinkihp gavpkvvesn shaqslnref qppaayqyfe nvrnflvaie dlklpafgac
      121 dlerdnldag ssakvvdcil alksyheckq incgtangyy kltrspmvmh sstkinsras
      181 sescrrldmp aacdkrppan gevykledti vklladymvd tkenfddnfl gsfhsrnpds
      241 vkvlskmiss cleeqlvnki pegsractkk anqnhinllk mqekelsdlk dllltakref
      301 edlqsqlqid lknigsqvee mstaavqyhk vveenrklyn mvqdlkgnir vfcrirpafc
      361 agtrnvidfi gedgslvisd plkpkkdgrk vfqfnrvfgp satqddvfnd tqplirsvmd
      421 gynvcifayg qtgsgktytm sgpsggstkd lginylalnd lfeisnqrkd iisyeiqvqm
      481 veiyneqird llsedssstk leirscsndn glslpdatlh tvkstsdvln lmkygevnrv
      541 vcstainnrs srshsiltvh vhgkytsgnm lrsclhlvdl agservdkse vtgdrlkeaq
      601 hinkslsclg dvvtalaqkn shipyrnskl tlllqdslgg haktlmfahv speedsfget
      661 lstlkfarrv stvelgaarl nkessevmql keqienlkka lankeapstp sykmkepksp
      721 fekqmaaiek tpprtrrlsi engstmksek amkaedrrgp kipssitrar rlssegsrne
      781 dnsqikvsad vsrslhastv svqkyrqfqd eeavtkqfgn lsngssvmea yhskpprspt
      841 sssfqkqalk tdcrtqiprl elpstpepkv ytrndiqnlm qtvistesrt angkgsqvrk
      901 slrttigkli sgsekrnlqk tlelkspvrg vgnvhdlksp pvmahakaar resltgvqts
      961 gsnrsrrssl gekpielstp msnnrnartp ppvhpssakt tkrwl
//
LOCUS       XP_016706214            1005 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-14L [Gossypium hirsutum].
ACCESSION   XP_016706214
VERSION     XP_016706214.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850725.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706214.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1005
                     /product="kinesin-like protein KIN-14L"
                     /calculated_mol_wt=111577
     Region          25..144
                     /region_name="CH_AtKIN14-like"
                     /note="calponin homology (CH) domain found in Arabidopsis
                     thaliana Kinesin-like KIN-14 protein family; cd21203"
                     /db_xref="CDD:409052"
     Site            order(25,29,97,99..100,103..104,106,113..121,131,133..134,
                     136..137,140..141,144)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409052"
     Region          <276..>344
                     /region_name="YkyA"
                     /note="Putative cell-wall binding lipoprotein; pfam10368"
                     /db_xref="CDD:431235"
     Region          346..675
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(356..357,430..437,542..543,579..584)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     Region          <691..902
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..1005
                     /gene="LOC107920903"
                     /coded_by="XM_016850725.2:307..3324"
                     /db_xref="GeneID:107920903"
ORIGIN      
        1 meyvtrtgfh dlnlasrkae eaalrryvav awletlvgpl gissqpseke fisclrngli
       61 lcnvinkihp gavpkvvesn shaqslnref qppaayqyfe nvrnflvaie dlklpafgac
      121 dlerdnldag ssakvvdcil alksyheckq incgtangyy kltrspmvmh sstkinsras
      181 sescrrldmp aacdkrppan gevykledti vklladymvd tkenfddnfl gsfhsrnpds
      241 vkvlskmiss cleeqlvnki pegsractkk anqnhinllk mqekelsdlk dllltakref
      301 edlqsqlqid lknigsqvee mstaavqyhk vveenrklyn mvqdlkgnir vfcrirpafc
      361 agtrnvidfi gedgslvisd plkpkkdgrk vfqfnrvfgp satqddvfnd tqplirsvmd
      421 gynvcifayg qtgsgktytm sgpsggstkd lginylalnd lfeisnqrkd iisyeiqvqm
      481 veiyneqird llsedssstk leirscsndn glslpdatlh tvkstsdvln lmkygevnrv
      541 vcstainnrs srshsiltvh vhgkytsgnm lrsclhlvdl agservdkse vtgdrlkeaq
      601 hinkslsclg dvvtalaqkn shipyrnskl tlllqdslgg haktlmfahv speedsfget
      661 lstlkfarrv stvelgaarl nkessevmql keqienlkka lankeapstp sykmkepksp
      721 fekqmaaiek tpprtrrlsi engstmksek amkaedrrgp kipssitrar rlssegsrne
      781 dnsqikvsad vsrslhastv svqkyrqfqd eeavtkqfgn lsngssvmea yhskpprspt
      841 sssfqkqalk tdcrtqiprl elpstpepkv ytrndiqnlm qtvistesrt angkgsqvrk
      901 slrttigkli sgsekrnlqk tlelkspvrg vgnvhdlksp pvmahakaar resltgvqts
      961 gsnrsrrssl gekpielstp msnnrnartp ppvhpssakt tkrwl
//
LOCUS       XP_016707259             674 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-L-arabinofuranosidase 1 [Gossypium hirsutum].
ACCESSION   XP_016707259
VERSION     XP_016707259.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..674
                     /product="alpha-L-arabinofuranosidase 1"
                     /calculated_mol_wt=74353
     Region          71..203
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          242..654
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          486..648
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminus; smart00813"
                     /db_xref="CDD:214830"
     CDS             1..674
                     /gene="LOC107921975"
                     /coded_by="XM_016851770.2:269..2293"
                     /db_xref="GeneID:107921975"
ORIGIN      
        1 mgyckapcvf llclfisfcl prqlladevd knltaqlfid aseqssrpip qtlfgiffee
       61 inhagagglw aelvsnrgfe agganipsni dpwsiigdes siivstdrss cfernkvalk
      121 mevlcnsegt hicpsggvgi ynpgfwgmni eqgksykivf yvrstgaidi svsftssdgl
      181 qtlsstnika sasdvsnwtk mevlleaket nhnsrlqltt skngvvwfdq vsampldtyk
      241 ghgfrnelae mladikprfi rfpggcfveg ewlrnafrwk asvgpweerp ghfgdvwmyw
      301 tddglgyfef lqlaedlgal piwvfnngis hndqvdtssv lpfvqealdg iefargdass
      361 twgavraamg hpepfdlkyv aignedcgkk nyrgnylkfy daikrtypdi kiitncdgss
      421 lpldhptdly dfhvytsann lfsmshkfdr ttrqgpkafv seyavtgkda gtgsllaala
      481 eaafliglek nsdvvhmasy aplfvnsndr rwnpdaivfn sfqvygtpsy wvqrfftess
      541 gatllnatlq kdssnslvas aitwknsedg qtyvrikvvn fgsnsvnlqi svdgldpnsv
      601 klsgstkttl tsanlmdens fkepkkvapn qtlledaqem sallrphsft sfdllkesvn
      661 lriteddssl vssi
//
LOCUS       XP_016707261             674 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-L-arabinofuranosidase 1 [Gossypium hirsutum].
ACCESSION   XP_016707261
VERSION     XP_016707261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851772.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..674
                     /product="alpha-L-arabinofuranosidase 1"
                     /calculated_mol_wt=74353
     Region          71..203
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          242..654
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          486..648
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminus; smart00813"
                     /db_xref="CDD:214830"
     CDS             1..674
                     /gene="LOC107921975"
                     /coded_by="XM_016851772.2:285..2309"
                     /db_xref="GeneID:107921975"
ORIGIN      
        1 mgyckapcvf llclfisfcl prqlladevd knltaqlfid aseqssrpip qtlfgiffee
       61 inhagagglw aelvsnrgfe agganipsni dpwsiigdes siivstdrss cfernkvalk
      121 mevlcnsegt hicpsggvgi ynpgfwgmni eqgksykivf yvrstgaidi svsftssdgl
      181 qtlsstnika sasdvsnwtk mevlleaket nhnsrlqltt skngvvwfdq vsampldtyk
      241 ghgfrnelae mladikprfi rfpggcfveg ewlrnafrwk asvgpweerp ghfgdvwmyw
      301 tddglgyfef lqlaedlgal piwvfnngis hndqvdtssv lpfvqealdg iefargdass
      361 twgavraamg hpepfdlkyv aignedcgkk nyrgnylkfy daikrtypdi kiitncdgss
      421 lpldhptdly dfhvytsann lfsmshkfdr ttrqgpkafv seyavtgkda gtgsllaala
      481 eaafliglek nsdvvhmasy aplfvnsndr rwnpdaivfn sfqvygtpsy wvqrfftess
      541 gatllnatlq kdssnslvas aitwknsedg qtyvrikvvn fgsnsvnlqi svdgldpnsv
      601 klsgstkttl tsanlmdens fkepkkvapn qtlledaqem sallrphsft sfdllkesvn
      661 lriteddssl vssi
//
LOCUS       XP_016707260             674 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-L-arabinofuranosidase 1 [Gossypium hirsutum].
ACCESSION   XP_016707260
VERSION     XP_016707260.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851771.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..674
                     /product="alpha-L-arabinofuranosidase 1"
                     /calculated_mol_wt=74353
     Region          71..203
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          242..654
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          486..648
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminus; smart00813"
                     /db_xref="CDD:214830"
     CDS             1..674
                     /gene="LOC107921975"
                     /coded_by="XM_016851771.2:158..2182"
                     /db_xref="GeneID:107921975"
ORIGIN      
        1 mgyckapcvf llclfisfcl prqlladevd knltaqlfid aseqssrpip qtlfgiffee
       61 inhagagglw aelvsnrgfe agganipsni dpwsiigdes siivstdrss cfernkvalk
      121 mevlcnsegt hicpsggvgi ynpgfwgmni eqgksykivf yvrstgaidi svsftssdgl
      181 qtlsstnika sasdvsnwtk mevlleaket nhnsrlqltt skngvvwfdq vsampldtyk
      241 ghgfrnelae mladikprfi rfpggcfveg ewlrnafrwk asvgpweerp ghfgdvwmyw
      301 tddglgyfef lqlaedlgal piwvfnngis hndqvdtssv lpfvqealdg iefargdass
      361 twgavraamg hpepfdlkyv aignedcgkk nyrgnylkfy daikrtypdi kiitncdgss
      421 lpldhptdly dfhvytsann lfsmshkfdr ttrqgpkafv seyavtgkda gtgsllaala
      481 eaafliglek nsdvvhmasy aplfvnsndr rwnpdaivfn sfqvygtpsy wvqrfftess
      541 gatllnatlq kdssnslvas aitwknsedg qtyvrikvvn fgsnsvnlqi svdgldpnsv
      601 klsgstkttl tsanlmdens fkepkkvapn qtlledaqem sallrphsft sfdllkesvn
      661 lriteddssl vssi
//
LOCUS       XP_016707263             617 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016707263
VERSION     XP_016707263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851774.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..617
                     /product="pentatricopeptide repeat-containing protein
                     At1g80270, mitochondrial"
                     /calculated_mol_wt=69819
     Region          220..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          248..333
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          250..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          287..313
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          319..348
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <354..553
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          354..381
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          389..413
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          428..450
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          459..485
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          491..521
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          527..555
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          562..587
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..617
                     /gene="LOC107921976"
                     /coded_by="XM_016851774.2:134..1987"
                     /db_xref="GeneID:107921976"
ORIGIN      
        1 mwalrrvpkp lrdtsirtga sfsasarlqt sntsieknai fsgscpsllr fyrsthassn
       61 fsvwrcglss qagaessgee ddledgfsel etagnsekkr dhiakdeted gldsdqefsv
      121 dveetasnel elfgaetdvs dkkssgrrtt sglfkalisa pglsthkvld kwleegknls
      181 raeissatln lrkrrmygra lqlsewlemk qqlefnekdy asrldliaki rglqkaedyi
      241 qtipksfrge iiyrtllanc vvsnnlkkae evfnkmkdle fpstafacnq llllykrldk
      301 kkiadvlllm ekenvkptlf tyrilidtkg lcndisgmeq ivetmkaegi epdiqiqsvl
      361 akhyasaglm ekaeevlkam egdnikenrw vyrfllplya glgkadever iwkicdskpr
      421 feeflagiea wgklgkieks eeiferllkt skklparyyt hllkvysnhk mlekgkdlvk
      481 rmagngcqig pftwdalvkl hveagdveka dsilqkacqq neikpmfttf mvvmeqyarr
      541 gdihnaekml hrmrqagyva rvsqfqtlvr ayinakapay girermkadn ifpnkslaal
      601 lpqvdafrrt svsdlld
//
LOCUS       XP_016707149             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707149
VERSION     XP_016707149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851660.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..205
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23616
     Region          169..202
                     /region_name="DUF761"
                     /note="Cotton fibre expressed protein; pfam05553"
                     /db_xref="CDD:461675"
     CDS             1..205
                     /gene="LOC107921819"
                     /coded_by="XM_016851660.2:125..742"
                     /db_xref="GeneID:107921819"
ORIGIN      
        1 mvldspytik mvvgpsylkt lhplqafslk spsstlgfmk iktlihtlvy aqfyrliraf
       61 skakstfili ckqskpiqyl isnskttrkk ykhkklffgs frlhynwcss hvtpvpapvl
      121 eathstwnsv vstdqqcded tveselsgyl qwleekkgng nstvetdine idklaemfia
      181 nchekfrlek qesyrrfqem larsm
//
LOCUS       XP_016706782             383 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL5 [Gossypium hirsutum].
ACCESSION   XP_016706782
VERSION     XP_016706782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..383
                     /product="myb family transcription factor PHL5"
                     /calculated_mol_wt=42463
     Region          212..268
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          294..340
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..383
                     /gene="LOC107921445"
                     /coded_by="XM_016851293.2:187..1338"
                     /db_xref="GeneID:107921445"
ORIGIN      
        1 mntqkldcqe nveqnlgfsr dcnfeyigfq qpwnmatpmv dgtvshhpks sssstilvgf
       61 qtpgaafyat ercmgfpqyg sssqgaatsf csqynklcns qlpsfhasgd nfsiqslmks
      121 qifcnqyeks sdksctttqd pshdlsnllg tnaatlpnhf svpfrgnqdq gaycnshgss
      181 paklsfflqe kqsspgsfsv spsstgtvlt sktrirwtqd lhdkfvdcvk rlggaekatp
      241 kailklmdte gltifhvksh lqkyriakym pdsaqgksek rndltqidvk tglhltealq
      301 lqldvqrrlh eqleiqrnlq lqieeqgrql kmmidqqqkt sesllknqdf nispfdpsis
      361 fqdvfetsia essgtgniss kis
//
LOCUS       XP_016708092             160 aa            linear   PLN 06-AUG-2024
DEFINITION  outer envelope pore protein 16-3, chloroplastic/mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016708092
VERSION     XP_016708092.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852603.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..160
                     /product="outer envelope pore protein 16-3,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=16997
     Region          18..127
                     /region_name="Tim17"
                     /note="Tim17/Tim22/Tim23/Pmp24 family; pfam02466"
                     /db_xref="CDD:460567"
     CDS             1..160
                     /gene="LOC107922523"
                     /coded_by="XM_016852603.2:144..626"
                     /db_xref="GeneID:107922523"
ORIGIN      
        1 maadpselry yedddtptmk tikgattgfv agtiwgtvva twydvprver svaipglvrt
       61 lkmmgnygmt faaiggvyig veqllqnyrm krdfvngavg gfvagasilg fkgrsistai
      121 sagsalafts avidaggqtt rldtgkeyyp yttkkrpves
//
LOCUS       XP_016707986             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707986
VERSION     XP_016707986.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852497.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707986.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15404
     CDS             1..138
                     /gene="LOC107922451"
                     /coded_by="XM_016852497.2:519..935"
                     /db_xref="GeneID:107922451"
ORIGIN      
        1 mmrrgrgkak kqnvvssled pgsgedekip aykrrgrpqk qmkddidede aekveedged
       61 ikvsvltkei knqavtengr krkrsmqake nidsikkgng ittksstdda tksvgyrqng
      121 srrknkprra aeavveck
//
LOCUS       XP_040943457             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943457
VERSION     XP_040943457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087523.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15404
     CDS             1..138
                     /gene="LOC107922451"
                     /coded_by="XM_041087523.1:66..482"
                     /db_xref="GeneID:107922451"
ORIGIN      
        1 mmrrgrgkak kqnvvssled pgsgedekip aykrrgrpqk qmkddidede aekveedged
       61 ikvsvltkei knqavtengr krkrsmqake nidsikkgng ittksstdda tksvgyrqng
      121 srrknkprra aeavveck
//
LOCUS       XP_016707568             295 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 14 [Gossypium hirsutum].
ACCESSION   XP_016707568
VERSION     XP_016707568.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852079.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707568.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..295
                     /product="zinc finger CCCH domain-containing protein 14"
                     /calculated_mol_wt=30756
     Region          100..125
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          171..236
                     /region_name="KH-I_AtC3H36_like"
                     /note="type I K homology (KH) RNA-binding domain found in
                     Arabidopsis thaliana zinc finger CCCH domain-containing
                     proteins AtC3H36, AtC3H52 and similar proteins; cd22464"
                     /db_xref="CDD:411892"
     Site            order(178,180..182,184..188,191..192,195..196,201..204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411892"
     Region          261..286
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..295
                     /gene="LOC107922185"
                     /coded_by="XM_016852079.2:291..1178"
                     /db_xref="GeneID:107922185"
ORIGIN      
        1 mdarkrgrre agfnanggik kskpemesls tgvgskskpc tkffstagcq fgeschflhy
       61 vpggynavaq mmnlapavpp asrnvtataa vphgsgsqvk trlcnkfsgp egckygdkch
      121 fahgewelgk piapsqddpr smaplpgrmg srmeppppsg paatfgasat akisvdasla
      181 gaiigkggvh skqicrqtga klsirehesd pslrnieleg sfeqikeasa mvrelisslg
      241 pvpgpaktpg ahggqghpgs nyktklcdnf akgsctfger chfahgaael rksvv
//
LOCUS       XP_016707569             233 aa            linear   PLN 06-AUG-2024
DEFINITION  rhodanese-like domain-containing protein 9, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016707569
VERSION     XP_016707569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852080.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="rhodanese-like domain-containing protein 9,
                     chloroplastic"
                     /calculated_mol_wt=25479
     Region          44..172
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     CDS             1..233
                     /gene="LOC107922186"
                     /coded_by="XM_016852080.2:291..992"
                     /db_xref="GeneID:107922186"
ORIGIN      
        1 magiattcyy ltlsststrk twlelktnyg ratpirrrnl siraevnfvn aeeakkliav
       61 egyavldvrd ksqfdrahik scyhvplfie ntdndpgtiv krtlhnnfsg lffglpftkl
      121 npefvqsvks qfspesklll vcqeglrsta aankleqagf qniacitsgl qavkpgtfds
      181 vgkaelqdag kaglvtiqgk isavlgtvli caylfitlfp dqaeklllms pvr
//
LOCUS       XP_016706700             164 aa            linear   PLN 06-AUG-2024
DEFINITION  late embryogenesis abundant protein 46 [Gossypium hirsutum].
ACCESSION   XP_016706700
VERSION     XP_016706700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="late embryogenesis abundant protein 46"
                     /calculated_mol_wt=16766
     Region          1..71
                     /region_name="LEA_1"
                     /note="Late embryogenesis abundant (LEA) group 1;
                     pfam03760"
                     /db_xref="CDD:427491"
     CDS             1..164
                     /gene="LOC107921338"
                     /coded_by="XM_016851211.2:147..641"
                     /db_xref="GeneID:107921338"
ORIGIN      
        1 mqsmkekaan vaasaksgle ktkatmeekv ekarsndqme kqiakerkee rihqaelnkl
       61 earqhnaaak qagaeggfta tgtgtykatg thsysttger gqstgahqms alpghgsgqp
      121 agqvvegtaa ahpigsnlgv ggakshntrv egnphgygtg gtts
//
LOCUS       XP_016707225             113 aa            linear   PLN 06-AUG-2024
DEFINITION  late embryogenesis abundant protein D-113-like [Gossypium
            hirsutum].
ACCESSION   XP_016707225
VERSION     XP_016707225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851736.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..113
                     /product="late embryogenesis abundant protein D-113-like"
                     /calculated_mol_wt=12047
     Region          1..73
                     /region_name="LEA_1"
                     /note="Late embryogenesis abundant (LEA) group 1;
                     pfam03760"
                     /db_xref="CDD:427491"
     CDS             1..113
                     /gene="LOC107921938"
                     /coded_by="XM_016851736.2:62..403"
                     /db_xref="GeneID:107921938"
ORIGIN      
        1 mqaikekssn atasaksgle kvkaivedkl vktkgnnsnd akqeetvsqk kevrmeqael
       61 deeearlhda vtkhmggdgg ftaagtdlns qggwipiypt aahyngarsf slk
//
LOCUS       XP_040943458             148 aa            linear   PLN 06-AUG-2024
DEFINITION  VQ motif-containing protein 17 [Gossypium hirsutum].
ACCESSION   XP_040943458
VERSION     XP_040943458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087524.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..148
                     /product="VQ motif-containing protein 17"
                     /calculated_mol_wt=16549
     Region          43..68
                     /region_name="VQ"
                     /note="VQ motif; pfam05678"
                     /db_xref="CDD:461711"
     CDS             1..148
                     /gene="LOC121213978"
                     /coded_by="XM_041087524.1:112..558"
                     /db_xref="GeneID:121213978"
ORIGIN      
        1 menlrmmrnq trmspsnssp ssslsihkds qtitkpkiri ihifapeiik tdaanfrelv
       61 qrltgkppqq kgckrkprig gkddkpmelr tgflagietr ervkeegggf ssgfgdlddf
      121 iqemgefpll plddshhmhg feeaqlma
//
LOCUS       XP_016725839             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016725839
VERSION     XP_016725839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870350.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17650
     CDS             1..156
                     /gene="LOC107937464"
                     /coded_by="XM_016870350.2:212..682"
                     /db_xref="GeneID:107937464"
ORIGIN      
        1 meaatpnpnd vqvqhvtkks sdellrkfag lddddgggnk gaaftkelrv mvvkrrkrsg
       61 fprsrreslg hcespsnngt tglverkwll pppatrrstf lkqlgigrsq irareirnrs
      121 ifgtiektwr ktiegaskvf mekhynrhrr lindvv
//
LOCUS       XP_016725857             657 aa            linear   PLN 06-AUG-2024
DEFINITION  probable L-type lectin-domain containing receptor kinase S.5
            [Gossypium hirsutum].
ACCESSION   XP_016725857
VERSION     XP_016725857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..657
                     /product="probable L-type lectin-domain containing
                     receptor kinase S.5"
                     /calculated_mol_wt=73261
     Region          28..271
                     /region_name="Lectin_legB"
                     /note="Legume lectin domain; pfam00139"
                     /db_xref="CDD:459688"
     Region          336..609
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(336..340,344,355,357,386,402..405,409,411,461,463,
                     465..466,468,479,482,501..504)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(336..340,344,355,357,386,402..405,409,461,463,
                     465..466,468,479)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(340,409,411,461,463,465,482,501..504)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(478..485,497..504)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..657
                     /gene="LOC107937482"
                     /coded_by="XM_016870368.2:173..2146"
                     /db_xref="GeneID:107937482"
ORIGIN      
        1 matlpivell llaiiivvsc ikvqcfdfkf sdfqeenrkd lllsknstif rdaiqitpdl
       61 ngdikntpgr afygkkfklw sktkgkiasf nttfvinisn kdspevgegl afvlsadsnv
      121 pqesfgqwlg ivnattngts rarivgvefd trksyeeepd gnhvgldins cysieqqsls
      181 gygvnlsmgv dvrvvvqydg knmtvfvsng setqssnpvl svpvdlssfl petvhvgfsa
      241 stgnftelnc vrawefhgdd vgddsnllwv wivipilvlg lilglgiywr rrskkddler
      301 gyaniqahik sstaptrfkl relkratgnf nhknklgkgg fgtvykgvwk ekeiavkrvs
      361 kkshqgnqef iaevttignl nhknlvklig wcyenrelll vyeympngsl dkfifydekt
      421 gkgesnqpnl swetrliiiq gvaealdylh ngcekrvlhr dvkcsnimld sefnaklgdf
      481 glartiqqre kthhstieia gtpgymapet flisratvet dvysygvlll evvcgrklgn
      541 qselsnynns ivnwlweyys kgritdaads nldrdfaeke vesalilgla cchpnphfrp
      601 smktvsavla gemdppqvpl erpsfvwpav ppvftqsdys ltgsqsqfst fsevdgr
//
LOCUS       XP_016725858             398 aa            linear   PLN 06-AUG-2024
DEFINITION  metal tolerance protein C2 [Gossypium hirsutum].
ACCESSION   XP_016725858
VERSION     XP_016725858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..398
                     /product="metal tolerance protein C2"
                     /calculated_mol_wt=44870
     Region          117..398
                     /region_name="CzcD"
                     /note="Co/Zn/Cd efflux system component [Inorganic ion
                     transport and metabolism]; COG1230"
                     /db_xref="CDD:440843"
     CDS             1..398
                     /gene="LOC107937483"
                     /coded_by="XM_016870369.2:345..1541"
                     /db_xref="GeneID:107937483"
ORIGIN      
        1 meksksfkyy seepesphpw naefgisyas drryafsrqs sfkqsmrdpq ipsfsngssk
       61 pflsrnvssi dippgfysfd hskegnfdak gsadkflvfd svfwvfrvmr tgnrqmkrll
      121 imislnvays taelaiglft griglvsdaf hltfgcgllt fslfamaasr rqsdsvytyg
      181 yqrlevlsaf tnalfllfls fslavealha fiqdesehkh ylivsavtnl lvnlmgvwff
      241 rnyarvnlvy rkpedmnyhs vclhvladsv rsaglilasw flslgvnnae vlclglvsva
      301 vfmlvmplfk asggvllqma ppnisssala kcwwqikshe dvievsqarf welvpghvvg
      361 slslqvkkem ddrrileyvh nlyhelgihd ltvqtdya
//
LOCUS       XP_040943459             188 aa            linear   PLN 06-AUG-2024
DEFINITION  probable L-type lectin-domain containing receptor kinase S.5
            [Gossypium hirsutum].
ACCESSION   XP_040943459
VERSION     XP_040943459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087525.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..188
                     /product="probable L-type lectin-domain containing
                     receptor kinase S.5"
                     /calculated_mol_wt=21029
     Region          <1..142
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..188
                     /gene="LOC107937476"
                     /coded_by="XM_041087525.1:1..567"
                     /db_xref="GeneID:107937476"
ORIGIN      
        1 mldsefiael gdfglartih ekekayystv eiagtpgyma petflisrat vetdvysfgv
       61 lvlevvcgrk pdnkseqnny nnsivnwlwe fyengkitaa vdsrmdgnfv eneaervlil
      121 glacfhpnph crpcmrtvlq vllgeidppe vpqerpsfvw pamppsftqm dhslkgsqln
      181 pftelagr
//
LOCUS       XP_040943460             171 aa            linear   PLN 06-AUG-2024
DEFINITION  probable L-type lectin-domain containing receptor kinase S.5
            [Gossypium hirsutum].
ACCESSION   XP_040943460
VERSION     XP_040943460.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087526.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="probable L-type lectin-domain containing
                     receptor kinase S.5"
                     /calculated_mol_wt=19592
     Region          67..>171
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..171
                     /gene="LOC107937477"
                     /coded_by="XM_041087526.1:1..516"
                     /db_xref="GeneID:107937477"
ORIGIN      
        1 mipvvilvlf igvrfylyrr tgpieedfkg aqrniedeir rsdfapkkfr fselkqatgn
       61 fspknklgkg gfgtvykgsw gnqdvavkrv skksnqgkqe fiaevttign lnhknlvkli
      121 gwcyercell lvyeympngs ldkyifcdek asmvesrlnw eqrqniirgv a
//
LOCUS       XP_040943461             213 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HAT14 [Gossypium hirsutum].
ACCESSION   XP_040943461
VERSION     XP_040943461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087527.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..213
                     /product="homeobox-leucine zipper protein HAT14"
                     /calculated_mol_wt=23769
     Region          29..118
                     /region_name="HD-ZIP_N"
                     /note="HD-ZIP protein N terminus; pfam04618"
                     /db_xref="CDD:461370"
     Region          157..203
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     CDS             1..213
                     /gene="LOC107937471"
                     /coded_by="XM_041087527.1:457..1098"
                     /db_xref="GeneID:107937471"
ORIGIN      
        1 melglsldgs skpfsflekt pklssndhlg fclglgrsqe krdsleaerr gnggdlkrvs
       61 sdphlqlhir lpwlfdnlhe tglskgrgrg ldvnrlplva lageatvahs spnsavssfq
      121 mdfwfrnrns rgkrdldaet ergssrasdd deddngssrk klrlskeqsa fleenfkehn
      181 nlnpkqklal akqlnlrprq vevvclhfhg gwv
//
LOCUS       XP_016725863             616 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence [Gossypium hirsutum].
ACCESSION   XP_016725863
VERSION     XP_016725863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870374.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..616
                     /product="protein trichome birefringence"
                     /calculated_mol_wt=68718
     Region          259..310
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          311..599
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..616
                     /gene="LOC107937485"
                     /coded_by="XM_016870374.2:170..2020"
                     /db_xref="GeneID:107937485"
ORIGIN      
        1 madiakyvpv nggttvgtdi kslfsviktr rtvalfmfaf vgftlllafc pssntsspwv
       61 tnifsasstn satrsqfssl fdyffsntss spqqstnfts pssssgsnnh trsnngstel
      121 gntgqeqlsd sninenttfa psntstnntq ssvlhanltq asspsvnenp pstsnqvekk
      181 gnsevlkvnq ttpvvgnspa ksdssdklss gkggksvaek gvvsnitasp tkkkkdngsg
      241 selsakqgie slmeslmncd lfdggwvkdn syplykpgsc sfideqfsci ingrpdksyq
      301 klkwkpkgct lprlngghml ellrgkrlvf vgdslnrnmw eslvcilkna akkpknvyea
      361 hgrsyfrgev sysfifkdyn ftleffvspf lvrewempdk nggkketlrl dlvgksadqy
      421 ksadilvfnt ghwwthekts kgkdyyqegs hvyeelnvle afrkalttws rwidanvnpm
      481 ktmvffrgys ashfsggqwn sggacdnetn piknekyltp ypskmlmlel vlkgmkthvt
      541 ylnitrltdf rkdghpsiyr khpkqklsed erkeplkyqd cshwclpgvp dswnellyae
      601 llvkeskmrq hqrrar
//
LOCUS       XP_016725853             220 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D A [Gossypium hirsutum].
ACCESSION   XP_016725853
VERSION     XP_016725853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="phospholipase D A"
                     /calculated_mol_wt=24681
     Region          136..169
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..220
                     /gene="LOC107937479"
                     /coded_by="XM_016870364.2:249..911"
                     /db_xref="GeneID:107937479"
ORIGIN      
        1 mrirnsgnpp qrslspppps pptpsfstsr shvmvsrtna rlssidspva qdgsvkndsw
       61 svstkeslgh sifgqtstss nsvssslsfn grwceeerai plkkrrvvmv syetkeqsre
      121 rmekdtlvee rnqnqrcnrr ngkgwrcdkm kvkghslcnh hlemqrmrns stststtnqg
      181 edgdgagrpa favrenkrfk vvkarsmssl lrdtvplfyy
//
LOCUS       XP_016725834             314 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 [Gossypium hirsutum].
ACCESSION   XP_016725834
VERSION     XP_016725834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="E3 ubiquitin-protein ligase SINAT2"
                     /calculated_mol_wt=35351
     Region          64..102
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Region          108..307
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..314
                     /gene="LOC107937458"
                     /coded_by="XM_016870345.2:179..1123"
                     /db_xref="GeneID:107937458"
ORIGIN      
        1 mapggnacke vieshspvad ydiasakses nnatstttta tmktsvnlvg khgihsnngv
       61 yellecpvct nlmyppihqc pnghtlcsnc kirvhnccpt crydlgnirc lalekvaesl
      121 elpckyqnlg cqdifpyysk lkheqhcrfr pyncpyagsd csvtgdiptl vshlkddhkv
      181 dmhdgctfnh ryvksnphev enatwmltvf ncfgrqfclh feafqlgmap vymaflrfmg
      241 ddneakkfsy slevgangrk liwqgiprsi rdshrkvrds qdglviqrnl alyfsggdrq
      301 elklrvtgri wkee
//
LOCUS       XP_016725833             314 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 [Gossypium hirsutum].
ACCESSION   XP_016725833
VERSION     XP_016725833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="E3 ubiquitin-protein ligase SINAT2"
                     /calculated_mol_wt=35351
     Region          64..102
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Region          108..307
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..314
                     /gene="LOC107937458"
                     /coded_by="XM_016870344.2:270..1214"
                     /db_xref="GeneID:107937458"
ORIGIN      
        1 mapggnacke vieshspvad ydiasakses nnatstttta tmktsvnlvg khgihsnngv
       61 yellecpvct nlmyppihqc pnghtlcsnc kirvhnccpt crydlgnirc lalekvaesl
      121 elpckyqnlg cqdifpyysk lkheqhcrfr pyncpyagsd csvtgdiptl vshlkddhkv
      181 dmhdgctfnh ryvksnphev enatwmltvf ncfgrqfclh feafqlgmap vymaflrfmg
      241 ddneakkfsy slevgangrk liwqgiprsi rdshrkvrds qdglviqrnl alyfsggdrq
      301 elklrvtgri wkee
//
LOCUS       XP_016725832             477 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid permease 3 [Gossypium hirsutum].
ACCESSION   XP_016725832
VERSION     XP_016725832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016870343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..477
                     /product="amino acid permease 3"
                     /calculated_mol_wt=52362
     Region          31..465
                     /region_name="Aa_trans"
                     /note="Transmembrane amino acid transporter protein;
                     pfam01490"
                     /db_xref="CDD:279788"
     CDS             1..477
                     /gene="LOC107937457"
                     /coded_by="XM_016870343.2:333..1766"
                     /db_xref="GeneID:107937457"
ORIGIN      
        1 mgekgavknh lhnnlvfdhp igfdddgrlk rtgtvwtasa hiitavigsg vlslawataq
       61 lgwiagpavi flfsfvtyyt stllaacyrc ddpvngkrny tymeavranl ggfevkicgw
      121 vqylnlfgva igytiassis mmaikrsncf hasrgknpch mnsnpymigf giaeiifsqi
      181 pdfdqlwwls ivaavmsfty stiglglgia kvaengkirg sltgisvgtv tqtqkiwrsf
      241 qalgdmafay syslilieiq dtlkappses ktmskatlls vgvttlfyml cgcmgyaafg
      301 dlspgnlltg fgfynpfwll dianaaivih lvgayqvycq plfafieksa akrfpdsefi
      361 tkdikipipg frpynlnlfr lvwrtifvml ttlismllpf fndivgllga igfwpltvyf
      421 pvemyisqnk iakwstrwlc lqilsiacls itiaaaagsi agvildlksy kpfstay
//
LOCUS       XP_040943462             209 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein MADS9 [Gossypium hirsutum].
ACCESSION   XP_040943462
VERSION     XP_040943462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087528.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..209
                     /product="agamous-like MADS-box protein MADS9"
                     /calculated_mol_wt=24320
     Region          2..80
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,67..68,
                     71,74..75)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          83..164
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..209
                     /gene="LOC107937475"
                     /coded_by="XM_041087528.1:57..686"
                     /db_xref="GeneID:107937475"
ORIGIN      
        1 mgrgkieikr ienssnrqvt yskrrngimk kakeitilcd akvsliifgs sgkmheycsp
       61 stnlvdildq yqktsgkklw dakhenlsne idrikkendn mqielrhlkg editslpyke
      121 lmaiedalen gltyvrgkqm dvldktwknt kfleedykql sfilnqqqva yesareqmdh
      181 gyqrardyns qmsstfqvqp mqpnlqerm
//
LOCUS       XP_040943463             172 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML44 [Gossypium hirsutum].
ACCESSION   XP_040943463
VERSION     XP_040943463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087529.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="probable calcium-binding protein CML44"
                     /calculated_mol_wt=19624
     Region          4..167
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..172
                     /gene="LOC121213980"
                     /coded_by="XM_041087529.1:182..700"
                     /db_xref="GeneID:121213980"
ORIGIN      
        1 msplskndlr rifekldkng dglvsleeln wllerigvqf sleeleslvg kpclgfeefl
       61 ffydsisnhn tkieaafdee eeeeeirmvh gggddddddh gdsdlakafk vfdlngdgfi
      121 sceelqsvlv rlglwdekng kdcrnmicfy dtnldgmidf eefknmmlrs vs
//
LOCUS       XP_040943464             382 aa            linear   PLN 06-AUG-2024
DEFINITION  alcohol dehydrogenase class-P [Gossypium hirsutum].
ACCESSION   XP_040943464
VERSION     XP_040943464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087530.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..382
                     /product="alcohol dehydrogenase class-P"
                     /calculated_mol_wt=41520
     Region          8..379
                     /region_name="alcohol_DH_plants"
                     /note="Plant alcohol dehydrogenase; cd08301"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,95,144,178,298,322)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,178)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176261"
     Site            order(48..49,178,182,203..207,227..228,232,272..273,
                     277..278,296..297,321..323,375)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176261"
     CDS             1..382
                     /gene="LOC107922343"
                     /coded_by="XM_041087530.1:188..1336"
                     /db_xref="GeneID:107922343"
ORIGIN      
        1 mstagqvirc kaavaweagk plsieeveva ppqkhevrik ilftalchtd vyyweckgyt
       61 plfprilghe asgivesvge gvndlkpgdh vlpiftgeck ecrhclsees nnmcellrin
      121 cdrgvmladg ktrfsingkp iyhfvgtstf sqytvvhvgq vakisptapl dkvcpiscgi
      181 ctgfgatvnv akpkkgqtva vfglgavgla aaegarvcga sriiavdvnp rrfeeakrfg
      241 itefvnpkdy dkpvqevive mtgggvdrsv ectgsvqami safecvhdgw gvcvlvgvpk
      301 kddafkthpm nllsertlkg afygnykprt dipmvvdkyl nkelgldmdk fithsvpfad
      361 inkafdymlq giglrcmihl da
//
LOCUS       XP_016707413             423 aa            linear   PLN 06-AUG-2024
DEFINITION  L-2-hydroxyglutarate dehydrogenase, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016707413
VERSION     XP_016707413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..423
                     /product="L-2-hydroxyglutarate dehydrogenase,
                     mitochondrial"
                     /calculated_mol_wt=45919
     Region          29..420
                     /region_name="LhgO"
                     /note="L-2-hydroxyglutarate oxidase LhgO [Carbohydrate
                     transport and metabolism]; COG0579"
                     /db_xref="CDD:440344"
     CDS             1..423
                     /gene="LOC107922088"
                     /coded_by="XM_016851924.2:211..1482"
                     /db_xref="GeneID:107922088"
ORIGIN      
        1 mlkrdvvrvi krrfhlpkps etwrnapkek aecvvigagi vglavarels lkgkevlvld
       61 saptfgtats srnsevihag iyypsnslra rfcvrgrkll yhycsqrgip hnqigkliva
      121 tgtseipkln qlfnrgiqng venlrmldas eaikmepelh cvkallspas gildshslml
      181 slvgeaetng atfsyntavi gghlegnqmv lhvcetktlt nwdgntplql dlllmpkivv
      241 nssglsaptl akrfhglnta iippayyarg syfilsnans trhppfkhli ypvpeegglg
      301 vhvtldldgq lkfgpdvewi phvpdttnfl nkfdysvsad hvarfypeir kyypnlkdgs
      361 lipgyagirp klhgpgqsac dfviqgedih gvgglvnlfg iespgltssm aiaeyvaall
      421 lgg
//
LOCUS       XP_016707414             349 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707414
VERSION     XP_016707414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..349
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=38328
     Region          109..317
                     /region_name="SpeE"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; COG0421"
                     /db_xref="CDD:440190"
     CDS             1..349
                     /gene="LOC107922089"
                     /coded_by="XM_016851925.2:121..1170"
                     /db_xref="GeneID:107922089"
ORIGIN      
        1 mfwssislsp tsiasppfpl telffpplsp tptltaatfk lrssstcrct ktdltsqhee
       61 pppnpypkqd ekpqaaaaaa aaaeetfqvl taihtqyndi livdtpqsrm llldsthnvh
      121 svlqkgdekw tgsywdefvs lppivtegpi aiyglgggta ahlmldvwps lqlegweide
      181 ilidkareyf glsnlekcnd vggqlqvhid dafsheqhrp sgyaaividl fsdgkvlsql
      241 qeveiwlels nrlmpggrlm vncggvsess ldgkvqlpsi ddiwmqnsti kalaeafpgq
      301 vnwkrmpesq gqnylaltgp lpdltswsam vpscpseavk qwkpcrpfh
//
LOCUS       XP_040943466             311 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polyamine aminopropyl transferase isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943466
VERSION     XP_040943466.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087532.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="probable polyamine aminopropyl transferase
                     isoform X2"
                     /calculated_mol_wt=33996
     Region          109..303
                     /region_name="SpeE"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; COG0421"
                     /db_xref="CDD:440190"
     CDS             1..311
                     /gene="LOC107922089"
                     /coded_by="XM_041087532.1:121..1056"
                     /db_xref="GeneID:107922089"
ORIGIN      
        1 mfwssislsp tsiasppfpl telffpplsp tptltaatfk lrssstcrct ktdltsqhee
       61 pppnpypkqd ekpqaaaaaa aaaeetfqvl taihtqyndi livdtpqsrm llldsthnvh
      121 svlqkgdekw tgsywdefvs lppivtegpi aiyglgggta ahlmldvwps lqlegweide
      181 ilidkareyf glsnlekcnd vggqlqvhid dafsheqhrp sgyaaividl fsdgkvlsql
      241 qeveiwlels nrlmpggrlm vncggvsess ldgkvqlpsi ddiwmqnsti kalaeafpgq
      301 vfmmsmscgm d
//
LOCUS       XP_016707415             291 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707415
VERSION     XP_016707415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..291
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=32042
     Region          109..>231
                     /region_name="SpeE"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; COG0421"
                     /db_xref="CDD:440190"
     CDS             1..291
                     /gene="LOC107922089"
                     /coded_by="XM_016851926.2:121..996"
                     /db_xref="GeneID:107922089"
ORIGIN      
        1 mfwssislsp tsiasppfpl telffpplsp tptltaatfk lrssstcrct ktdltsqhee
       61 pppnpypkqd ekpqaaaaaa aaaeetfqvl taihtqyndi livdtpqsrm llldsthnvh
      121 svlqkgdekw tgsywdefvs lppivtegpi aiyglgggta ahlmldvwps lqlegweide
      181 ilidkareyf glsnlekcnd vggqlqvhid dafsheqhrp sgyaaividl fsdgkvlsql
      241 qevnwkrmpe sqgqnylalt gplpdltsws amvpscpsea vkqwkpcrpf h
//
LOCUS       XP_016707416             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707416
VERSION     XP_016707416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=29417
     Region          48..233
                     /region_name="SpeE"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; COG0421"
                     /db_xref="CDD:440190"
     CDS             1..265
                     /gene="LOC107922089"
                     /coded_by="XM_016851927.2:375..1172"
                     /db_xref="GeneID:107922089"
ORIGIN      
        1 mtfslstlln lgcyysipli mfiafykrvm rngpdhigya vkkplllffh hdefvslppi
       61 vtegpiaiyg lgggtaahlm ldvwpslqle gweideilid kareyfglsn lekcndvggq
      121 lqvhiddafs heqhrpsgya aividlfsdg kvlsqlqeve iwlelsnrlm pggrlmvncg
      181 gvsessldgk vqlpsiddiw mqnstikala eafpgqvnwk rmpesqgqny laltgplpdl
      241 tswsamvpsc pseavkqwkp crpfh
//
LOCUS       XP_016708067             495 aa            linear   PLN 06-AUG-2024
DEFINITION  protein disulfide-isomerase [Gossypium hirsutum].
ACCESSION   XP_016708067
VERSION     XP_016708067.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708067.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..495
                     /product="protein disulfide-isomerase"
                     /calculated_mol_wt=55438
     Region          33..481
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..495
                     /gene="LOC107922505"
                     /coded_by="XM_016852578.2:274..1761"
                     /db_xref="GeneID:107922505"
ORIGIN      
        1 marsvcvwfa laaivcslsa isaeessesk efvltldhsn ftdtvskhdf ivvefyapwc
       61 ghckhlapey ekaasilskh dppiflakvd addeankdla sqydvkgypt lqilrnggkn
      121 vqeykgprea dgiveylkkq sgpasveikl tedasnlidd kkivivgvfp kfsgeefesy
      181 malaeklrsd ydfghtldak hlprgessvv gplvrlfkpf delvvdfkdf kpealekfie
      241 essiplvtlf nkdpsnhpfv akfyncpnak amlfadlste gfdslqskyr evaeqykgkg
      301 isfllgdvea sqaafqyfgv eesqvpliii qsddgkkyfk pnlkaddiap wvkdfkegkv
      361 apyvksepip kennepvkvv vadtlqdmvf ksgknvllef yapwcghckk lapildevav
      421 hyekdadvli akldatsndi ldenfdvrgy ptvyfrsang nitpyegdrt kedivdfiek
      481 nrdktvhqes lkdel
//
LOCUS       XP_016708182             369 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-mannose transporter GONST3 [Gossypium hirsutum].
ACCESSION   XP_016708182
VERSION     XP_016708182.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852693.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708182.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="GDP-mannose transporter GONST3"
                     /calculated_mol_wt=40731
     Region          43..333
                     /region_name="VRG4"
                     /note="Nucleotide-sugar transporter [Carbohydrate
                     transport and metabolism / Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; COG5070"
                     /db_xref="CDD:227402"
     CDS             1..369
                     /gene="LOC107922590"
                     /coded_by="XM_016852693.2:195..1304"
                     /db_xref="GeneID:107922590"
ORIGIN      
        1 mskdvedpad rgpevlvpsg daqetwyscv lkqvsvygva agycisasll siinkwavmk
       61 fpypgaltal qyltsaagvv lcgwfkvleh dpldlrtmgq flpaaiifyl slftnselll
      121 hanvdtfivf rsavpifvai getlylsqpw pslktwislg tifggsvlyv ltdyqftlta
      181 ytwaaaylvs msidfvyikh vvmtiglntw glvlynnlea lllfplelli mgelkkikhe
      241 isdesdwhsf qvilpvglsc lfglaisffg fscrraisat gftvlgivnk lltvvinlvi
      301 wdkhstfvgt vgllicmlgg vmyqqstssk pkavseatvq eteeqqnlle mqnnsqaknn
      361 ekedtkiek
//
LOCUS       XP_016708183             369 aa            linear   PLN 06-AUG-2024
DEFINITION  GDP-mannose transporter GONST3 [Gossypium hirsutum].
ACCESSION   XP_016708183
VERSION     XP_016708183.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852694.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708183.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="GDP-mannose transporter GONST3"
                     /calculated_mol_wt=40731
     Region          43..333
                     /region_name="VRG4"
                     /note="Nucleotide-sugar transporter [Carbohydrate
                     transport and metabolism / Posttranslational modification,
                     protein turnover, chaperones / Intracellular trafficking
                     and secretion]; COG5070"
                     /db_xref="CDD:227402"
     CDS             1..369
                     /gene="LOC107922590"
                     /coded_by="XM_016852694.2:441..1550"
                     /db_xref="GeneID:107922590"
ORIGIN      
        1 mskdvedpad rgpevlvpsg daqetwyscv lkqvsvygva agycisasll siinkwavmk
       61 fpypgaltal qyltsaagvv lcgwfkvleh dpldlrtmgq flpaaiifyl slftnselll
      121 hanvdtfivf rsavpifvai getlylsqpw pslktwislg tifggsvlyv ltdyqftlta
      181 ytwaaaylvs msidfvyikh vvmtiglntw glvlynnlea lllfplelli mgelkkikhe
      241 isdesdwhsf qvilpvglsc lfglaisffg fscrraisat gftvlgivnk lltvvinlvi
      301 wdkhstfvgt vgllicmlgg vmyqqstssk pkavseatvq eteeqqnlle mqnnsqaknn
      361 ekedtkiek
//
LOCUS       XP_016707566             358 aa            linear   PLN 06-AUG-2024
DEFINITION  caffeic acid 3-O-methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016707566
VERSION     XP_016707566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852077.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..358
                     /product="caffeic acid 3-O-methyltransferase"
                     /calculated_mol_wt=39146
     Region          25..76
                     /region_name="dimerization"
                     /note="dimerization domain; pfam08100"
                     /db_xref="CDD:400439"
     Region          131..336
                     /region_name="Methyltransf_2"
                     /note="O-methyltransferase domain; pfam00891"
                     /db_xref="CDD:395719"
     CDS             1..358
                     /gene="LOC107922183"
                     /coded_by="XM_016852077.2:103..1179"
                     /db_xref="GeneID:107922183"
ORIGIN      
        1 msqedqeeev gklavrlana vvlpmvlksa lelniidtis aagdgaflsp sqiasalpsk
       61 npdapvlldr mlrllashsi lkcsvkakek geierlygag plckflvknq dggsiaplll
      121 lhhdqvfmqs wyhlndaile ggvpfskayg mtafeypgtd qrfnrvfnqa msnhtalimr
      181 kivdvykgfd glkvlvdvgg gigvalsfit skypqikgin fdlphvlada ptysgvehvg
      241 gdmfesvpkg daiflkwilh dwsdehclkl vkncwealpn ggkviivesi lpevpdtsvs
      301 snivceqdlf mlaqnpggke rtlkeyeala lktgfsscev iccaynswvm qmekraiy
//
LOCUS       XP_016707567             111 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyltransferase At1g77540 [Gossypium hirsutum].
ACCESSION   XP_016707567
VERSION     XP_016707567.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707567.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..111
                     /product="acetyltransferase At1g77540"
                     /calculated_mol_wt=12249
     Region          24..101
                     /region_name="Acetyltransf_CG"
                     /note="GCN5-related N-acetyl-transferase; pfam14542"
                     /db_xref="CDD:434030"
     CDS             1..111
                     /gene="LOC107922184"
                     /coded_by="XM_016852078.2:297..632"
                     /db_xref="GeneID:107922184"
ORIGIN      
        1 maagsatgas peapkivwne tqrrfetedk kayieyvlrh dgkvmdiiht fvpsskrgmg
       61 lashlcvaaf hhanshslsi ipscsyvsdt fllrnpswns llysedlrsn i
//
LOCUS       XP_016706408             278 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem II 22 kDa protein, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016706408
VERSION     XP_016706408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..278
                     /product="photosystem II 22 kDa protein, chloroplastic"
                     /calculated_mol_wt=29124
     Region          <97..134
                     /region_name="LHCA5"
                     /note="Photosystem I light harvesting complex protein,
                     LHCA5/LHCA6/HLI5/Ycf17 family [Energy production and
                     conversion]; COG5743"
                     /db_xref="CDD:444453"
     Region          101..219
                     /region_name="Chloroa_b-bind"
                     /note="Chlorophyll A-B binding protein; pfam00504"
                     /db_xref="CDD:459836"
     Region          <204..255
                     /region_name="PLN00084"
                     /note="photosystem II subunit S (PsbS); Provisional"
                     /db_xref="CDD:177707"
     CDS             1..278
                     /gene="LOC107921067"
                     /coded_by="XM_016850919.2:162..998"
                     /db_xref="GeneID:107921067"
ORIGIN      
        1 maqtmlvmss tsvstshvvn lkrdhtllhf qaqglkpkps shflfnphsn tvaassskaf
       61 ttfalfkpkt kaapkkaapk pkpkvedgif gtsggigftk qnelfvgrva migfaasllg
      121 eaitgkgila qlnletgipi yeaeplllff ilftllgaig algdrgkfvd epptgiegav
      181 ippgkgirga lglkeggplf gftkanelfv grlaqlgiaf sligeiitgk galaqlniet
      241 gipisdiepl vlfnvaffff aainpgtgkf vtdeaeed
//
LOCUS       XP_016706626             196 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706626
VERSION     XP_016706626.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706626.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..196
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22458
     CDS             1..196
                     /gene="LOC107921262"
                     /coded_by="XM_016851137.2:445..1035"
                     /db_xref="GeneID:107921262"
ORIGIN      
        1 mmkgyredns ccyfhpkevv igvcplclne rllflaskqa qrsssstcks shrlihgvsl
       61 kkppinlpki falgsllnrl efkhcksens dahdastsqe dsfisikfee ngvgswdkgt
      121 vskvslehcs mswnpikdtn ksviehakpr aslrwrkrig hlfqlmrwkr sskvegvkvm
      181 rrkgwwirsl tkwtke
//
LOCUS       XP_016706379             163 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g08330, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016706379
VERSION     XP_016706379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850890.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="uncharacterized protein At4g08330,
                     chloroplastic"
                     /calculated_mol_wt=18269
     CDS             1..163
                     /gene="LOC107921038"
                     /coded_by="XM_016850890.2:243..734"
                     /db_xref="GeneID:107921038"
ORIGIN      
        1 mensvfmnhi qhlngnllys fspaslghvt yscgscgyel nlssssrntt tigskygksi
       61 krgiisffsi desrftqvde fqcvpyfsrh swglfrhrtk llcrkcgnhi gnaydektsg
      121 yplvldksns spcnevsshr kydvriralq pssaqelgtp hfm
//
LOCUS       XP_016708179            1406 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion protein PDS5 homolog A isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708179
VERSION     XP_016708179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852690.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1406
                     /product="sister chromatid cohesion protein PDS5 homolog A
                     isoform X1"
                     /calculated_mol_wt=159182
     Region          25..1088
                     /region_name="PDS5"
                     /note="Sister chromatid cohesion protein PDS5 protein;
                     pfam20168"
                     /db_xref="CDD:466319"
     Region          234..256
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(248..249,252,255..256,293..294,297,300..301,304,
                     334..335,338,341..342,345,373..374,377,379..380,411..412,
                     415,418..419)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          276..304
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          314..346
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          355..380
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          391..420
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1267..1316
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(1275,1280,1282,1300,1302,1304)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     CDS             1..1406
                     /gene="LOC107922589"
                     /coded_by="XM_016852690.2:195..4415"
                     /db_xref="GeneID:107922589"
ORIGIN      
        1 meestlqlis gigaklgqla rpnkdvlvks lrqvvsalsq ieqpsvveva akaqvlrkle
       61 aatkplrnsi vkhglpnhtd kdvrllgaic vseffrilap qppfadkhlr difkliisif
      121 seladttsaf fsrrvkilet varckccvim ldigcddlil emfktffsvv rdhhqqslin
      181 dvlsimthil neevshqlmd vilgnliqes kdatsaasql aasviqscae klqpfvcgfl
      241 tscsldrdsv gselkefyhe ivlkifqcap emlnaiipsl tqelmtdqvd vrikavnlig
      301 klllrpeyrv aqryhalyve flkrfadkss evrvtalqca kacclanpsg ieslellpai
      361 kdrlldfddk vrmqavivac diarsnlkyt shefvsefte rlrdkkisvr kktlqkvmev
      421 yrdycnkcae ghiticdrfe qipckvlmlc ydkdckefrs qnielvived lfpillpvee
      481 rtrhwihlfs lfspshvkal sailsqkkrl qtemrnylvl rrkekeinse dmqkklrssf
      541 vkmsasfpdp skaeecfdkl sqmkdnkifs slgqlldevt lksamairdk llkvignkhp
      601 hyeflqllcs kclfnifdse hvscilnlis sgglesyhle afsielllvi isnfpslmrg
      661 selelcllfe ekylihdkii qvlvkagphi svkfsdfypv lkkiclegtr sqskyavsai
      721 aslidvsepy vfselceelv nslhrgrnta tvlqslgcia qysvstfenh dkeitqyvyk
      781 kilqaksldd psviedssgc ttcklkiygl kmlvksflph rrsqisrpin sllgtllkml
      841 qkedvlddii scagdrdyir laaaksvlql srrwdlhisp difcptilmg kddsssvrls
      901 fldktykllk ervipiryac aftlatadgf kdrqhsfkym vefikeynre aqkrrtsmvq
      961 ggsivdypay lvvflihlla hdegfppegc qdeaiyaqfc spllfflhts issnnvdddm
     1021 divnvaafyl yyifraikra kdavdvqrtp rlhfladvgi sgvnsfyqkg isslprpeki
     1081 llpsslykit pmkneeanwk sfthtfverv vhifksqisl pvgtvrkrgr kcheddnfil
     1141 vshkhedfst rgadqvhkks trqgvnlgcr grcavspdal gsvgshnkds neqeygasns
     1201 sesalekgrs fsshsftqkp sqmeskvsth kvercstsdg nvaadknhta gasnnckesg
     1261 trnevligqr ikvwstfdsc fysgtvddfn pennthkitc dsgeveilcl dseswetisn
     1321 cslmerevqp sdkqntlhlr qcvkdtvdkl rsddrqeckt klnmedckvp crekkkkers
     1381 knsssvskvm nidedavarr trsrkv
//
LOCUS       XP_016708180            1393 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion protein PDS5 homolog A isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016708180
VERSION     XP_016708180.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852691.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1393
                     /product="sister chromatid cohesion protein PDS5 homolog A
                     isoform X2"
                     /calculated_mol_wt=157737
     Region          25..1088
                     /region_name="PDS5"
                     /note="Sister chromatid cohesion protein PDS5 protein;
                     pfam20168"
                     /db_xref="CDD:466319"
     Region          234..256
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(248..249,252,255..256,293..294,297,300..301,304,
                     334..335,338,341..342,345,373..374,377,379..380,411..412,
                     415,418..419)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          276..304
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          314..346
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          355..380
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          391..420
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1267..1316
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(1275,1280,1282,1300,1302,1304)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     CDS             1..1393
                     /gene="LOC107922589"
                     /coded_by="XM_016852691.2:198..4379"
                     /db_xref="GeneID:107922589"
ORIGIN      
        1 meestlqlis gigaklgqla rpnkdvlvks lrqvvsalsq ieqpsvveva akaqvlrkle
       61 aatkplrnsi vkhglpnhtd kdvrllgaic vseffrilap qppfadkhlr difkliisif
      121 seladttsaf fsrrvkilet varckccvim ldigcddlil emfktffsvv rdhhqqslin
      181 dvlsimthil neevshqlmd vilgnliqes kdatsaasql aasviqscae klqpfvcgfl
      241 tscsldrdsv gselkefyhe ivlkifqcap emlnaiipsl tqelmtdqvd vrikavnlig
      301 klllrpeyrv aqryhalyve flkrfadkss evrvtalqca kacclanpsg ieslellpai
      361 kdrlldfddk vrmqavivac diarsnlkyt shefvsefte rlrdkkisvr kktlqkvmev
      421 yrdycnkcae ghiticdrfe qipckvlmlc ydkdckefrs qnielvived lfpillpvee
      481 rtrhwihlfs lfspshvkal sailsqkkrl qtemrnylvl rrkekeinse dmqkklrssf
      541 vkmsasfpdp skaeecfdkl sqmkdnkifs slgqlldevt lksamairdk llkvignkhp
      601 hyeflqllcs kclfnifdse hvscilnlis sgglesyhle afsielllvi isnfpslmrg
      661 selelcllfe ekylihdkii qvlvkagphi svkfsdfypv lkkiclegtr sqskyavsai
      721 aslidvsepy vfselceelv nslhrgrnta tvlqslgcia qysvstfenh dkeitqyvyk
      781 kilqaksldd psviedssgc ttcklkiygl kmlvksflph rrsqisrpin sllgtllkml
      841 qkedvlddii scagdrdyir laaaksvlql srrwdlhisp difcptilmg kddsssvrls
      901 fldktykllk ervipiryac aftlatadgf kdrqhsfkym vefikeynre aqkrrtsmvq
      961 ggsivdypay lvvflihlla hdegfppegc qdeaiyaqfc spllfflhts issnnvdddm
     1021 divnvaafyl yyifraikra kdavdvqrtp rlhfladvgi sgvnsfyqkg isslprpeki
     1081 llpsslykit pmkneeanwk sfthtfverv vhifksqisl pvgtvrkrgr kcheddnfil
     1141 vshkhedfst rgadqvhkks trqgvnlgcr grcavspdal gsvgshnkds neqeygasns
     1201 sesalekgrs fsshsftqkp sqmeskvsth kvercstsdg nvaadknhta gasnnckesg
     1261 trnevligqr ikvwstfdsc fysgtvddfn pennthkitc dsgeveilcl dseswetisn
     1321 cslmerevqp sdkqntlhlr qwqecktkln medckvpcre kkkkerskns ssvskvmnid
     1381 edavarrtrs rkv
//
LOCUS       XP_016708181            1341 aa            linear   PLN 06-AUG-2024
DEFINITION  sister chromatid cohesion protein PDS5 homolog A isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016708181
VERSION     XP_016708181.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852692.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1341
                     /product="sister chromatid cohesion protein PDS5 homolog A
                     isoform X3"
                     /calculated_mol_wt=151613
     Region          25..1088
                     /region_name="PDS5"
                     /note="Sister chromatid cohesion protein PDS5 protein;
                     pfam20168"
                     /db_xref="CDD:466319"
     Region          234..256
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(248..249,252,255..256,293..294,297,300..301,304,
                     334..335,338,341..342,345,373..374,377,379..380,411..412,
                     415,418..419)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          276..304
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          314..346
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          355..380
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          391..420
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1267..1316
                     /region_name="Tudor_Agenet_AtEML-like"
                     /note="Tudor-like Agenet domain found in Arabidopsis
                     thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar
                     proteins; cd20404"
                     /db_xref="CDD:410475"
     Site            order(1275,1280,1282,1300,1302,1304)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410475"
     CDS             1..1341
                     /gene="LOC107922589"
                     /coded_by="XM_016852692.2:198..4223"
                     /db_xref="GeneID:107922589"
ORIGIN      
        1 meestlqlis gigaklgqla rpnkdvlvks lrqvvsalsq ieqpsvveva akaqvlrkle
       61 aatkplrnsi vkhglpnhtd kdvrllgaic vseffrilap qppfadkhlr difkliisif
      121 seladttsaf fsrrvkilet varckccvim ldigcddlil emfktffsvv rdhhqqslin
      181 dvlsimthil neevshqlmd vilgnliqes kdatsaasql aasviqscae klqpfvcgfl
      241 tscsldrdsv gselkefyhe ivlkifqcap emlnaiipsl tqelmtdqvd vrikavnlig
      301 klllrpeyrv aqryhalyve flkrfadkss evrvtalqca kacclanpsg ieslellpai
      361 kdrlldfddk vrmqavivac diarsnlkyt shefvsefte rlrdkkisvr kktlqkvmev
      421 yrdycnkcae ghiticdrfe qipckvlmlc ydkdckefrs qnielvived lfpillpvee
      481 rtrhwihlfs lfspshvkal sailsqkkrl qtemrnylvl rrkekeinse dmqkklrssf
      541 vkmsasfpdp skaeecfdkl sqmkdnkifs slgqlldevt lksamairdk llkvignkhp
      601 hyeflqllcs kclfnifdse hvscilnlis sgglesyhle afsielllvi isnfpslmrg
      661 selelcllfe ekylihdkii qvlvkagphi svkfsdfypv lkkiclegtr sqskyavsai
      721 aslidvsepy vfselceelv nslhrgrnta tvlqslgcia qysvstfenh dkeitqyvyk
      781 kilqaksldd psviedssgc ttcklkiygl kmlvksflph rrsqisrpin sllgtllkml
      841 qkedvlddii scagdrdyir laaaksvlql srrwdlhisp difcptilmg kddsssvrls
      901 fldktykllk ervipiryac aftlatadgf kdrqhsfkym vefikeynre aqkrrtsmvq
      961 ggsivdypay lvvflihlla hdegfppegc qdeaiyaqfc spllfflhts issnnvdddm
     1021 divnvaafyl yyifraikra kdavdvqrtp rlhfladvgi sgvnsfyqkg isslprpeki
     1081 llpsslykit pmkneeanwk sfthtfverv vhifksqisl pvgtvrkrgr kcheddnfil
     1141 vshkhedfst rgadqvhkks trqgvnlgcr grcavspdal gsvgshnkds neqeygasns
     1201 sesalekgrs fsshsftqkp sqmeskvsth kvercstsdg nvaadknhta gasnnckesg
     1261 trnevligqr ikvwstfdsc fysgtvddfn pennthkitc dsgeveilcl dseswetisn
     1321 cslmerevqp sdkqntlhlr q
//
LOCUS       XP_040943467             252 aa            linear   PLN 06-AUG-2024
DEFINITION  psbP domain-containing protein 3, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_040943467
VERSION     XP_040943467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087533.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="psbP domain-containing protein 3, chloroplastic"
                     /calculated_mol_wt=28214
     Region          93..251
                     /region_name="PsbP"
                     /note="pfam01789"
                     /db_xref="CDD:426435"
     CDS             1..252
                     /gene="LOC121213982"
                     /coded_by="XM_041087533.1:603..1361"
                     /db_xref="GeneID:121213982"
ORIGIN      
        1 massvwclyi spclkkkggg gllhfplnsn tkrvqrlqmq lqnqelmked dghatstrrr
       61 qfilqaplia lsfpqlimst aiavaeidvp qdfrvytdev nkfkifipqd wqvgagepnn
      121 fksitafype eeansnvsva itglgpdftr mesfgkvdaf adtlvsgldr swqrppgvaa
      181 klidckasng fyyieytlqn pgesrrhlfs aigmasngwy nrlytvtgqf veeeaekygs
      241 riekavssfr fi
//
LOCUS       XP_016707743             453 aa            linear   PLN 06-AUG-2024
DEFINITION  lysM domain-containing GPI-anchored protein 1 [Gossypium hirsutum].
ACCESSION   XP_016707743
VERSION     XP_016707743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852254.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..453
                     /product="lysM domain-containing GPI-anchored protein 1"
                     /calculated_mol_wt=47019
     Region          <110..218
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          <173..221
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     CDS             1..453
                     /gene="LOC107922287"
                     /coded_by="XM_016852254.2:681..2042"
                     /db_xref="GeneID:107922287"
ORIGIN      
        1 mpnrnptsfs syvalcfmif snvalvtsks tiepcsnsds cnallgynly tdlkvaevas
       61 lfqvdpisil tanaidisyp dvenhilpsn lflkipilcs cvdgirksvs tkyktrpqdt
      121 lssiadsiya glvsadqike ansisdpsvl dvgenlvvpl pctcfngtdn glpaiylsyv
      181 vkavdtlagi aasysttitd lmnvnamgst sikagdilav plsacasnfp ryasdygmiv
      241 pngsyaitas hcvqcscgpg srnlycmpss lavscssmqc kssnlklgnv tvqqssagcn
      301 vtscayggya ngtiitwlss slqprcpgpq qfppllappt hvtrdsafap apapqsdggs
      361 tttvpktvps tvslpglapa gapigstsda stlvnsvaav ptalmiflli klippfslss
      421 lcycyntsge qhkriasfep igsglsgspe dvt
//
LOCUS       XP_016708093             265 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016708093
VERSION     XP_016708093.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852604.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708093.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..265
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29744
     Region          <38..>66
                     /region_name="TolA_bind_tri"
                     /note="TolA binding protein trimerization; pfam16331"
                     /db_xref="CDD:435282"
     CDS             1..265
                     /gene="LOC107922524"
                     /coded_by="XM_016852604.2:229..1026"
                     /db_xref="GeneID:107922524"
ORIGIN      
        1 mggheaveva ktvlevadva wtalecshhl hhhhdaphnl hnselqkele tlksenrrlr
       61 nqleqnlkll nnlsespvll ndcppnlyar lvstvdsrdf ltrlkslnes dikvefpfke
      121 aagddihsae vlinvdqkep swwvwvtdem vpsnveewsg iddenyivvs eehvvdgvan
      181 fmakcllsnp kaqtltpeel qktmlkaleg vsklekvlsi whagkmfyvl stwgltlagl
      241 yksrtivkla amgihttgkv vmrvl
//
LOCUS       XP_016706716             382 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At4g08300 [Gossypium hirsutum].
ACCESSION   XP_016706716
VERSION     XP_016706716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..382
                     /product="WAT1-related protein At4g08300"
                     /calculated_mol_wt=41581
     Region          22..338
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..382
                     /gene="LOC107921359"
                     /coded_by="XM_016851227.2:85..1233"
                     /db_xref="GeneID:107921359"
ORIGIN      
        1 mggqtpcaal rnmlnkfkpy lsmvslqfgy agmyiismvs lkhgmsnfil atyrhvaati
       61 viapfaflle rkirpkmtlp iflrivilgf lepvldqnly flgmkytsat yasaflnivp
      121 avtfimamif rlekinvkki rsvakiigta itvmgamvmt lykgpiidfv ksggaihhgt
      181 taesadkhrv tgtimllgsv fcwssffilq sftlkkypae lsltawicfm gmlegagvsl
      241 vmvrdlsawk igwdsrllaa tysgivcsgi tyyvqgvvir ergpvfvtsf splcmiitaa
      301 lgaiilaekl hlgsilgaii ivlglytvvw gkskdgknte tddksnglqe lpvknnakai
      361 svdvgidgsd kivniptskn pf
//
LOCUS       XP_016707633             430 aa            linear   PLN 06-AUG-2024
DEFINITION  aminoacylase-1 [Gossypium hirsutum].
ACCESSION   XP_016707633
VERSION     XP_016707633.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852144.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..430
                     /product="aminoacylase-1"
                     /calculated_mol_wt=47886
     Region          21..423
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..430
                     /gene="LOC107922227"
                     /coded_by="XM_016852144.2:112..1404"
                     /db_xref="GeneID:107922227"
ORIGIN      
        1 mpsirllvlf fflffsvhsq edtpiarflr ylqfntahpn psyadpisfl isqanaiglh
       61 artleftpsk plllltwpgs npslpsvlfn shldsvpaep skwiyppfsa tlapdgkiya
      121 rgaqddkcia mqyleairnl kangftpsrt vhisyvpdee iggfdgsakf aeskefkdln
      181 vgfvldegqa stgeefrvfy adrspwglii katgdpghgs rlydngamen lmksvevitk
      241 fresqfdivk sgeamnsevi svnpvylkag ipsptgfvmn mqpseaeagf dlrlpptadp
      301 dlikkriaee waparrnmty eliekgpird yldrplmtlt ndsnpwwpvf kqaieaaggk
      361 lsrpeilast tdarfmrqrg iptlgfspmt ntpillhdhn eflkdtvylr gievyesvis
      421 slssfkgesy
//
LOCUS       XP_040943468             210 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF014 [Gossypium
            hirsutum].
ACCESSION   XP_040943468
VERSION     XP_040943468.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087534.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..210
                     /product="ethylene-responsive transcription factor ERF014"
                     /calculated_mol_wt=22981
     Region          31..90
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(31,33,35,37,39,43,45,52,54,57)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..210
                     /gene="LOC121213983"
                     /coded_by="XM_041087534.1:174..806"
                     /db_xref="GeneID:121213983"
ORIGIN      
        1 mvkrdqqkil qaeaskqmtp ssssckkkyk gvrmrswgsw vseirapnqk triwlgsyst
       61 peaaarayda allclkgssa slnfpntsld yipdaimspk siqrvaaaaa ansfpdngis
      121 ssttapvspi psslvsspsm asspsdqvdd vsliqslesi smmepwytsf ddlqspkyid
      181 qmfnlvpfdp ptvmddfyee lsdirlwsfp
//
LOCUS       XP_040943469             409 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RZF1 [Gossypium hirsutum].
ACCESSION   XP_040943469
VERSION     XP_040943469.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087535.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..409
                     /product="E3 ubiquitin-protein ligase RZF1"
                     /calculated_mol_wt=46379
     Region          61..96
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          <265..>364
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          277..319
                     /region_name="RING-H2_RNF126-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF126, RNF115, and similar proteins; cd16667"
                     /db_xref="CDD:438329"
     CDS             1..409
                     /gene="LOC121213984"
                     /coded_by="XM_041087535.1:214..1443"
                     /db_xref="GeneID:121213984"
ORIGIN      
        1 mynniydgfv tltqinqkkr ktsenqkknm slspprarvn gvdgangang angaapgrny
       61 qhywcyqchq fvriastnpp eevvcplcsg rfvcemeinr prmvvdftaf dpspearlle
      121 alslfmyppi rlfglgnsdn qepqgrrwlr rpnnlleseg enlprerlrr rrsrsldgtd
      181 dreqepeslg rprtwiivrq pgsfslpeae ptlpheipal papgldprnf ffgtglneli
      241 eqltqndrpg vppapestih aiptvkites hlrddsqcpv ckeefkvgge arelpcshiy
      301 hsdcivpwlr lhnscpvcrh elpvsstdeq lpvsstdeql pvsstdelss sdyfsepevs
      361 sndgrrcwrl rqlasnlwpf hrrhrrispq tdespavele srshrccil
//
LOCUS       XP_016707751             899 aa            linear   PLN 06-AUG-2024
DEFINITION  nitrate reductase [NADH] [Gossypium hirsutum].
ACCESSION   XP_016707751
VERSION     XP_016707751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852262.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..899
                     /product="nitrate reductase [NADH]"
                     /calculated_mol_wt=100951
     Region          1..899
                     /region_name="PLN02252"
                     /note="nitrate reductase [NADPH]"
                     /db_xref="CDD:215141"
     CDS             1..899
                     /gene="LOC107922292"
                     /coded_by="XM_016852262.2:181..2880"
                     /db_xref="GeneID:107922292"
ORIGIN      
        1 maayvdnrqf rrlepalngv faplkpgpst qihrpvkhvf idheyddsss ddegneingh
       61 ykeliiksgn elepsildpr deatadnwve rnasmvrltg khpfnseppl nrlmhhgfit
      121 pvplhyvrnh gqvpkaswdd wtvevaglvk rpvkltmdql fnefqsrefp vtlvcagnrr
      181 keqnmikqti gfnwgaagis tsvwrgvplc dvlkrcgifs kkhdalnvcf egaedlpggg
      241 gskygtsikk efamdpsrdi ilaymqngkl ltpdhgfpvr miipgfiggr mvkwlkriiv
      301 ttqesdnyyh ykdnrvlpsh vdaelanaeg wwykpeyiin elninsaitt pcheeilpin
      361 awttqrpytl rgyaysgggk kvtrvevtmd ggetwqvctl dhpeqpnkyg kywcwcfwsl
      421 evevldllga keiavrawdq tlntqpekli wnvmgmmnnc wfrvktnvck phkgeigmvf
      481 ehptlpgnqt ggwmakerhl eksisdanpt lkksvsspfm ntasktfsms evkkhnsads
      541 awivvhghiy dctrflkdhp ggadsilina gtdcteefda ihsdkakkll edyrigeltt
      601 sgyasdssts spnssvhgas nvmsflapik eavptkpval vprekipckl iqktsishdv
      661 rvfrfalpse dqvlglpvgk hiflcatidd klcmraytpt saidevghfd lvvkvyfkgv
      721 hpkfpngglm sqyldslplg sfldvkgplg hieytgrgnf qvhgkpkfan klamlaggtg
      781 itpiyqviqa ilkypedkte myvvyanrte ddillkeeld gwakkhdrlk vwyvvqesir
      841 egwqyslgfi tesilrehip vgsndtlala cgpppmiqfa vqpnlekmny dvkdsllvf
//
LOCUS       XP_040943470             326 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943470
VERSION     XP_040943470.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087536.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..326
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35020
     CDS             1..326
                     /gene="LOC107921514"
                     /coded_by="XM_041087536.1:193..1173"
                     /db_xref="GeneID:107921514"
ORIGIN      
        1 midynvkvhn svdkskakpa vrtsdmniti ksgqqqyslt hhgnqsphsd hiksdmpkts
       61 gkllvlkpgw engvsspthk dvaspttnms srgttsqhav apvtsassin sknqklsage
      121 rkastlnpva gftvekkpsl aqtqnwndff nllkkktsmn saaglansdp hnssstteks
      181 evskevvtas apacanenhi aatsnggtrh dakrfsddge nymtstsmvy pdeeeaaflr
      241 slgweensge degltkeiin afyqeymklr pslklcssml pklahtfatn ldgasepsss
      301 dsvseaclsl slhskskevp ilmadl
//
LOCUS       XP_016708187             136 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 50 homolog [Gossypium hirsutum].
ACCESSION   XP_016708187
VERSION     XP_016708187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852698.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="transmembrane protein 50 homolog"
                     /calculated_mol_wt=14797
     Region          14..124
                     /region_name="UPF0220"
                     /note="Uncharacterized protein family (UPF0220);
                     pfam05255"
                     /db_xref="CDD:428395"
     CDS             1..136
                     /gene="LOC107922594"
                     /coded_by="XM_016852698.2:318..728"
                     /db_xref="GeneID:107922594"
ORIGIN      
        1 mdlgellaif spgvagavfg agwwfwvdav vcssvhisfv hylpeifasi aalmfncvrk
       61 ddidyspyde gewrlklwlf layvvsfvsl aasvgllmqd slvtsgpslw tgtagvlqcv
      121 fvlirqcsle pqaslq
//
LOCUS       XP_040943471             121 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943471
VERSION     XP_040943471.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087537.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..121
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13434
     Region          <51..>94
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..121
                     /gene="LOC107920993"
                     /coded_by="XM_041087537.1:1845..2210"
                     /db_xref="GeneID:107920993"
ORIGIN      
        1 mhahlkkcss inslqedssi qaymqnvsyg sgegndrlli ckitnsqcyk wvnlnaikrl
       61 veadalkmei ipnpkvvngi kvlqletvvg aairvencts ygydvlkckk fcltmcfsir
      121 d
//
LOCUS       XP_040943472             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943472
VERSION     XP_040943472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087538.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..104
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11742
     Region          <34..>77
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..104
                     /gene="LOC107920993"
                     /coded_by="XM_041087538.1:723..1037"
                     /db_xref="GeneID:107920993"
ORIGIN      
        1 mdlekgmigc lyakymvyel lristhtnsq cykwvnlnai krlveadalk meiipnpkvv
       61 ngikvlqlet vvgaairven ctsygydvlk ckkfcltmcf sird
//
LOCUS       XP_040943473             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943473
VERSION     XP_040943473.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087539.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..104
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11742
     Region          <34..>77
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..104
                     /gene="LOC107920993"
                     /coded_by="XM_041087539.1:758..1072"
                     /db_xref="GeneID:107920993"
ORIGIN      
        1 mdlekgmigc lyakymvyel lristhtnsq cykwvnlnai krlveadalk meiipnpkvv
       61 ngikvlqlet vvgaairven ctsygydvlk ckkfcltmcf sird
//
LOCUS       XP_040943474             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943474
VERSION     XP_040943474.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087540.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..104
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11742
     Region          <34..>77
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..104
                     /gene="LOC107920993"
                     /coded_by="XM_041087540.1:1930..2244"
                     /db_xref="GeneID:107920993"
ORIGIN      
        1 mdlekgmigc lyakymvyel lristhtnsq cykwvnlnai krlveadalk meiipnpkvv
       61 ngikvlqlet vvgaairven ctsygydvlk ckkfcltmcf sird
//
LOCUS       XP_016707279            1475 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707279
VERSION     XP_016707279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851790.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1475
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=162807
     Region          <275..>468
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          <1068..>1242
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     CDS             1..1475
                     /gene="LOC107921987"
                     /coded_by="XM_016851790.2:410..4837"
                     /db_xref="GeneID:107921987"
ORIGIN      
        1 mtgalchrqk kmmgrgadgg cgteerlcrp isgvssrrpv iqsetsekqy dvgvdffsqa
       61 rkalcqrspf dvpeggsvsg lsvptlpsgl asllkqtdsr kkhkkshsga dkkssrqgek
      121 areasiwaet evffrdlalp didalfeiip srflaarkkc fmipyvgnvl tgnsnlyaev
      181 dekasvssge nfngvnengn vdkegkevvr vedwhlmeid nvatqaqfsp ketaghffpd
      241 stsslewllg srsrvllsse rpskkrklvg edaglekilv arpcdgdssl chfcctgdtg
      301 kgsnrlivcs sckvavhqkc ygvqkdvdss wlcswceltn dgdgtvksci lcpkqggalk
      361 pvqkndengs svefahlfcs ywmpevyied ltkmepiina ggindtrkkl vcnvckvkdg
      421 acvrcshgtc rtsfhpicar earhrmevwg rfgcdnielr afcskhseih dnssspqhge
      481 lcasgtdssi tnqlslqsmd nsqnskisqs ngdkiavgie glddksgdge lqeidvsgtr
      541 snaqvasecg eaqhlvdvgl lertnddehs pfnslnfami lkklidrgkv nvkdiaseig
      601 lsadslsasl nndslapdlq ckivkwlsnh aymgtslknl kvnikslisw kdetdetgmg
      661 isddimasks diadvvavkp mppwrrtknn vrilrdnkil csdeatddig vvmdevrvdl
      721 lakeetndls kisildatgr nsanpdvsqd saerhfhtye gnstdllnds lhgksqsera
      781 mtpekktdqg nsiwsivnpi iadlirteef snfyihpytq kqllqmpngl lcknrvgece
      841 grkdtlnefy gakegdlsrl vassnasvcc shqsehsmcn ekscpvddle lsvkarklga
      901 lsfspedeve geiifyqhrl lgnavsrnhv tdnlvsrvak slpqeveasr tkiwdtmlvn
      961 rylyelreak kqgrkerrhk eaqavlaaat aavaassris srkdgledss hqenvlklna
     1021 svgraginsq trakdalsrn avsrtpseky sdivqsvtdf skghprscdi crrsetvlnp
     1081 ilvcsgckva vhldcyrnvk estgpwrcel ceelfssrss gapslnfwek pypaaecglc
     1141 ggttgafrks vdgqwvhafc aewvlestfr rgqvnpvegm hlassgvdvc ciccckrgac
     1201 ikcgyghcqi tfhpscarsa gfcmnvklgg gklhhkayce qhsveqraka etqkhgieel
     1261 knmkqirvel erlrllceri ikreklkrel vlcsheilac krdhvtravl vhspffhpdv
     1321 ssesattslk ghtddnkscs eamrsddvtv dstlsvkhqa kvpvpvdnyq rtddsstsqs
     1381 lfvrkpterv pfsgqqiphr yslasrnald naewnsksrk pietfekelv mtsdeasmkn
     1441 srlpkgycyv pvdclpkekh ltrdttsdgq lehng
//
LOCUS       XP_016707280            1461 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707280
VERSION     XP_016707280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851791.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1461
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=161165
     Region          <275..>468
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          <1054..>1228
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     CDS             1..1461
                     /gene="LOC107921987"
                     /coded_by="XM_016851791.2:410..4795"
                     /db_xref="GeneID:107921987"
ORIGIN      
        1 mtgalchrqk kmmgrgadgg cgteerlcrp isgvssrrpv iqsetsekqy dvgvdffsqa
       61 rkalcqrspf dvpeggsvsg lsvptlpsgl asllkqtdsr kkhkkshsga dkkssrqgek
      121 areasiwaet evffrdlalp didalfeiip srflaarkkc fmipyvgnvl tgnsnlyaev
      181 dekasvssge nfngvnengn vdkegkevvr vedwhlmeid nvatqaqfsp ketaghffpd
      241 stsslewllg srsrvllsse rpskkrklvg edaglekilv arpcdgdssl chfcctgdtg
      301 kgsnrlivcs sckvavhqkc ygvqkdvdss wlcswceltn dgdgtvksci lcpkqggalk
      361 pvqkndengs svefahlfcs ywmpevyied ltkmepiina ggindtrkkl vcnvckvkdg
      421 acvrcshgtc rtsfhpicar earhrmevwg rfgcdnielr afcskhseih dnssspqhge
      481 lcasgtdssi tnqlslqsmd nsqnskisqs ngdkiavgie glddksgdge lqeidvsgtr
      541 snaqvasecg eaqhlvdvgl lertnddehs pfnslnfami lkklidrgkv nvkdiaseig
      601 lsadslsasl nndslapdlq ckivkwlsnh aymgtslknl kvnikslisw kdetdetgmg
      661 isddimasks diadvvavkp mppwrrtknn vrilrdnkil csdeatddig vvmdevrvdl
      721 lakeetndls kisildatgr nsanpdvsqd saerhfhtye gnstdllnds lhgksqsera
      781 mtpekktdqg nsiwsivnpi iadlirteef snfyihpytq kqllqmpngl lcknrvgake
      841 gdlsrlvass nasvccshqs ehsmcneksc pvddlelsvk arklgalsfs pedevegeii
      901 fyqhrllgna vsrnhvtdnl vsrvakslpq eveasrtkiw dtmlvnryly elreakkqgr
      961 kerrhkeaqa vlaaataava assrissrkd gledsshqen vlklnasvgr aginsqtrak
     1021 dalsrnavsr tpsekysdiv qsvtdfskgh prscdicrrs etvlnpilvc sgckvavhld
     1081 cyrnvkestg pwrcelceel fssrssgaps lnfwekpypa aecglcggtt gafrksvdgq
     1141 wvhafcaewv lestfrrgqv npvegmhlas sgvdvccicc ckrgacikcg yghcqitfhp
     1201 scarsagfcm nvklgggklh hkayceqhsv eqrakaetqk hgieelknmk qirvelerlr
     1261 llceriikre klkrelvlcs heilackrdh vtravlvhsp ffhpdvsses attslkghtd
     1321 dnkscseamr sddvtvdstl svkhqakvpv pvdnyqrtdd sstsqslfvr kptervpfsg
     1381 qqiphrysla srnaldnaew nsksrkpiet fekelvmtsd easmknsrlp kgycyvpvdc
     1441 lpkekhltrd ttsdgqlehn g
//
LOCUS       XP_016707470             447 aa            linear   PLN 06-AUG-2024
DEFINITION  probable eukaryotic translation initiation factor 5-1 [Gossypium
            hirsutum].
ACCESSION   XP_016707470
VERSION     XP_016707470.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851981.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707470.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..447
                     /product="probable eukaryotic translation initiation
                     factor 5-1"
                     /calculated_mol_wt=49374
     Region          15..129
                     /region_name="eIF2B_5"
                     /note="domain present in translation initiation factor
                     eIF2B and eIF5; smart00653"
                     /db_xref="CDD:214764"
     Region          290..445
                     /region_name="W2_eIF5"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 5; cd11561"
                     /db_xref="CDD:211399"
     CDS             1..447
                     /gene="LOC107922129"
                     /coded_by="XM_016851981.2:525..1868"
                     /db_xref="GeneID:107922129"
ORIGIN      
        1 malqnigasn sddafyrykm pkmitkiegr gngiktnvvn mveiakalar pasyttkyfg
       61 celgaqskfd ektgtshvng ahdtaklagl lenfikkyvq cygcgnpete iiitkmqmit
      121 lkcaacgfvs dvdmrdkltt filknppeak kstkdkkamr raekerlkeg eaadeelkki
      181 kkeskkkgss ttskvvaskg avtkkkskhs dedhspsqsq vdeneqvasd ddddvqwqtd
      241 tslaaaqqri qeqlsavtad mvmlstneek kksvkktpep dvkvhekcfn theklvneik
      301 ehlkkgsspt qlksflgsls gtsqeimdal ftalfedvgk gfakevtkkk nylaagataa
      361 aaaneegcqm mllhsmelfc gkaspeaake valvikvlyd ddileeefim ewyqkgiggs
      421 nkssqiwknv kpfiewlqna eseteee
//
LOCUS       XP_016707887             316 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphopantothenate--cysteine ligase 2 [Gossypium hirsutum].
ACCESSION   XP_016707887
VERSION     XP_016707887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852398.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="phosphopantothenate--cysteine ligase 2"
                     /calculated_mol_wt=35468
     Region          <44..266
                     /region_name="PRK05579"
                     /note="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate synthase; Validated"
                     /db_xref="CDD:235513"
     CDS             1..316
                     /gene="LOC107922382"
                     /coded_by="XM_016852398.1:210..1160"
                     /db_xref="GeneID:107922382"
ORIGIN      
        1 mdsaafheei dsffesappl kdsakitdkl nqfiqfdsps gevrgrrvvc vtsggttvpl
       61 eqrcvryidn fssgnrgaas teyfikagyk viflyrrgtc qpycrslped pllecfelad
      121 dfnfqvrqsh seavkgaird hhaavadgll lklpfatife ylqmlkiias smrtlgpham
      181 fylaaavsdf yvpwksmveh kiqsasgpld mrlmqvpkml svlrtewtpk afcisfklet
      241 dskillekai malkkykmha vvanelltrk evvtvvtdng nisvhrdktw agsdvedpli
      301 ellvnrhsty ikdpst
//
LOCUS       XP_016707888             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized J domain-containing protein C4H3.01 [Gossypium
            hirsutum].
ACCESSION   XP_016707888
VERSION     XP_016707888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="uncharacterized J domain-containing protein
                     C4H3.01"
                     /calculated_mol_wt=32652
     Region          83..151
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(111..113,128,131..132,135..136)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..274
                     /gene="LOC107922383"
                     /coded_by="XM_016852399.2:240..1064"
                     /db_xref="GeneID:107922383"
ORIGIN      
        1 msnlravcrp hmvftslmcs srhhylhqar srtrvsfrnp dfrsssfspw lhlsrdlrrk
       61 epwfrvnqrr tsvrasnwsd qkspyetlel erdadeeqik tsyrrlakfy hpdvydgkgt
      121 leegetaear fikiqaayel lidgerrrqy dmdnrvnpmk asqawmewli kkrkawdqrg
      181 dmavsawaeq qqrelnlrvr rlsrskidpd eerrilakek kasmehfnst lkrhtlvlkk
      241 rdlmrkkaee ekkkvinqll aaegleldtd desq
//
LOCUS       XP_016708052             354 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA7 [Gossypium hirsutum].
ACCESSION   XP_016708052
VERSION     XP_016708052.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852563.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708052.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..354
                     /product="transcription factor TGA7"
                     /calculated_mol_wt=39944
     Region          75..127
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Region          76..127
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(94,97..98,101..102,104..105,108..109,111..112,
                     115..116,118..119,122..123,125..126)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          161..235
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     Region          <242..332
                     /region_name="CpxP"
                     /note="Periplasmic chaperone Spy, Spy/CpxP family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3678"
                     /db_xref="CDD:442894"
     CDS             1..354
                     /gene="LOC107922496"
                     /coded_by="XM_016852563.2:314..1378"
                     /db_xref="GeneID:107922496"
ORIGIN      
        1 msspsteltr rmaiyeqfhh isrwadtfng dnspnigsst ivpadvrlkn kaecipceqv
       61 epsisdqetn kpsdkiqrrl aqnreaarks rmrkkayvqq lessrlklaq leqelerarq
      121 qgiqiagase agyfglsgtv nsgitsfeme yrhwveeqnr licelrtavq ahitdielhi
      181 lvesglnhyy nlfrmkadaa kadvfylisg iwrtsaerff hwiggfrpsa llnvvvpqie
      241 pltdqqhlev cnlrqssqea edalsqgvek lqqslaesva sdlcsgnyra qmvaaidkle
      301 alenfvsqad hlrqqtlqqm arilttrqaa rvllamgeyf hrlralssls aarp
//
LOCUS       XP_040943475             354 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA7 [Gossypium hirsutum].
ACCESSION   XP_040943475
VERSION     XP_040943475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087541.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..354
                     /product="transcription factor TGA7"
                     /calculated_mol_wt=39944
     Region          75..127
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Region          76..127
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(94,97..98,101..102,104..105,108..109,111..112,
                     115..116,118..119,122..123,125..126)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          161..235
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     Region          <242..332
                     /region_name="CpxP"
                     /note="Periplasmic chaperone Spy, Spy/CpxP family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3678"
                     /db_xref="CDD:442894"
     CDS             1..354
                     /gene="LOC107922496"
                     /coded_by="XM_041087541.1:249..1313"
                     /db_xref="GeneID:107922496"
ORIGIN      
        1 msspsteltr rmaiyeqfhh isrwadtfng dnspnigsst ivpadvrlkn kaecipceqv
       61 epsisdqetn kpsdkiqrrl aqnreaarks rmrkkayvqq lessrlklaq leqelerarq
      121 qgiqiagase agyfglsgtv nsgitsfeme yrhwveeqnr licelrtavq ahitdielhi
      181 lvesglnhyy nlfrmkadaa kadvfylisg iwrtsaerff hwiggfrpsa llnvvvpqie
      241 pltdqqhlev cnlrqssqea edalsqgvek lqqslaesva sdlcsgnyra qmvaaidkle
      301 alenfvsqad hlrqqtlqqm arilttrqaa rvllamgeyf hrlralssls aarp
//
LOCUS       XP_016706674             716 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706674
VERSION     XP_016706674.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706674.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..716
                     /product="uncharacterized protein"
                     /calculated_mol_wt=81068
     Region          246..317
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          369..436
                     /region_name="DEP"
                     /note="Domain found in Dishevelled, Egl-10, and Pleckstrin
                     (DEP); pfam00610"
                     /db_xref="CDD:459867"
     Region          519..642
                     /region_name="DUF547"
                     /note="Protein of unknown function, DUF547; pfam04784"
                     /db_xref="CDD:461427"
     CDS             1..716
                     /gene="LOC107921305"
                     /coded_by="XM_016851185.2:316..2466"
                     /db_xref="GeneID:107921305"
ORIGIN      
        1 mekdnsggkn atvsliderl geitdgiqkv qgkpeetrsl nvsnynvikl devngqdrsg
       61 ddrdqnqala sravqdnlgd kekhvkkcdk mdkdresysk aleemyetak avhfdepepv
      121 fdgtedpgme tklnsstcss gfnleegymw pekavvlknf vkekgavavt nvlhhlsikr
      181 ddvemgtvrv yqgapgsski geqtaersaw nplnyikmsc tadagwkaeq geddtegsli
      241 pvvtkgkvll ytrlgcqdcr evrwflrnkr lryveinidl ypsrklelek lsgscavpkv
      301 ffnevliggl selkhldmsg klaekidfli teapsteapl splsgeddvs ckgpvdelal
      361 ivqkmkryiv vkdrfykmrr ftncflgsea vdflsedqyl ereeavefgr klaselffrh
      421 vldenlleds nhlyrfldhd pvvstqchnt prgmielkpk piteiasrlr flfcaileay
      481 asedgrlvdy rsvhgseefa rylriiqelq rvdvqdmpre eklaffinly nmmaihailv
      541 wghpngslew rkllgdfkyv vggftyslss ihngilrcnq rppfnllkpf gvrdkrlqva
      601 lpypeplihf alvcgtrsgp alqcyssrni dkelmdaarv firsggltvd lsskvayask
      661 llkwfsvdfg qneievlkha snyleptnae aflgiiadsq lriiyqpydw glncys
//
LOCUS       XP_016706595             639 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase BoGH3B [Gossypium hirsutum].
ACCESSION   XP_016706595
VERSION     XP_016706595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..639
                     /product="beta-glucosidase BoGH3B"
                     /calculated_mol_wt=69488
     Region          53..>454
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          418..626
                     /region_name="Glyco_hydro_3_C"
                     /note="Glycosyl hydrolase family 3 C-terminal domain;
                     pfam01915"
                     /db_xref="CDD:396478"
     CDS             1..639
                     /gene="LOC107921228"
                     /coded_by="XM_016851106.2:18..1937"
                     /db_xref="GeneID:107921228"
ORIGIN      
        1 mksnttmsrk svslvglvll cchaslteqr lqgifkdpke pidervkdll gkmnleekvg
       61 qmtqierkna saevlksyfi gsvlsgggst pkvnatvkew vdmvngmqqa slstrlgipm
      121 iygidavhgh nnvmnatifp hnvglgvtrd pqllkeigaa talevratgi pyafapciav
      181 crdprwgrcy esysedhriv qqlteiingl qgeaktdmkg mpyvngktkv agsskhyvgd
      241 ggtvrginen ntivddsaly gmhmaayvns vakgiatima syssingvkm hahkqlltdy
      301 lkgklgfkgf iisdwegidr itspahsnys ysiqasinag idmvmvpyny tefydglidl
      361 vkkkaipmsr iddavsrilr vkfamglfen plgdysline vgsqkhrela rqavrkslvl
      421 lkngkpgnpp ilplpknagk ivvagshann lgyqcggwti ewqgvsgnnw tagttildgi
      481 katvdkrtkv vykkkpsdty sskgkmdygi vvvgevpyae tngdsqnlti papgpavien
      541 vcketkcvvi ivsgrpvvie pyvdkidalv aawlpgsegq gvadvlfgdy gftgklartw
      601 fkrvdqlpmn ygdpkydplf pfgfgletkp ipstkkpel
//
LOCUS       XP_016706596             150 aa            linear   PLN 06-AUG-2024
DEFINITION  heavy metal-associated isoprenylated plant protein 24 [Gossypium
            hirsutum].
ACCESSION   XP_016706596
VERSION     XP_016706596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="heavy metal-associated isoprenylated plant
                     protein 24"
                     /calculated_mol_wt=16414
     Region          35..89
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(35..37,40)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     CDS             1..150
                     /gene="LOC107921229"
                     /coded_by="XM_016851107.2:401..853"
                     /db_xref="GeneID:107921229"
ORIGIN      
        1 mgvegtleyi sdllssvkkk kkkkqihtva lkirmdcegc arkvkkvlsg vkgaksvdvd
       61 lkqqkatvtg yveakkvlaa aqstkkkvel wpyvpytlva npyvaqaydk kappnhvrkv
      121 patatvtett iddrytnlfs ddnpnacsim
//
LOCUS       XP_040943476            2267 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: acetyl-CoA carboxylase 1-like [Gossypium
            hirsutum].
ACCESSION   XP_040943476
VERSION     XP_040943476.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087542.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2267
                     /product="LOW QUALITY PROTEIN: acetyl-CoA carboxylase
                     1-like"
                     /calculated_mol_wt=252375
     Region          47..563
                     /region_name="PccA"
                     /note="Acetyl/propionyl-CoA carboxylase, alpha subunit
                     [Lipid transport and metabolism]; COG4770"
                     /db_xref="CDD:443802"
     Region          690..754
                     /region_name="biotinyl_domain"
                     /note="The biotinyl-domain or biotin carboxyl carrier
                     protein (BCCP) domain is present in all biotin-dependent
                     enzymes, such as acetyl-CoA carboxylase, pyruvate
                     carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
                     carboxylase, geranyl-CoA carboxylase; cd06850"
                     /db_xref="CDD:133459"
     Site            order(712,721..723,730)
                     /site_type="active"
                     /note="carboxyltransferase (CT) interaction site [active]"
                     /db_xref="CDD:133459"
     Site            722
                     /site_type="other"
                     /note="biotinylation site [posttranslational
                     modification]"
                     /db_xref="CDD:133459"
     Region          755..1497
                     /region_name="ACC_central"
                     /note="Acetyl-CoA carboxylase, central region; pfam08326"
                     /db_xref="CDD:462429"
     Region          1599..2151
                     /region_name="Carboxyl_trans"
                     /note="Carboxyl transferase domain; pfam01039"
                     /db_xref="CDD:426008"
     CDS             1..2267
                     /gene="LOC121203072"
                     /coded_by="XM_041087542.1:42..6845"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121203072"
ORIGIN      
        1 mleaqrsama gvgrgnngym ngvlpirspa tisevdefcy alggkkpihs ilianngmaa
       61 vkfirsirtw ayetfgteka illvamatpe dmrinaehir iadqfvevpg gtnnnnyanv
      121 qlivemaeit hvdavwpgwg hasenpelpd alnakgivfl gppsvsmaal gdkigsslia
      181 qaadvptlpw sgshvkipad sclvsipdei yskacvytte eaiassqvvg ypamikaswg
      241 gggkgirkvh nddevralfk qvqgevpgsp ifimkvasqs rhlevqllcd qygnvaalhs
      301 rdcsvqrrhq kiieegpitv apsetvkkle qaarrlaksv nyvgaatvey lysmetgeyy
      361 flelnprlqv ehpvtewiae vnlpaaqvav gmgiplwqip eirrfygmeh gagydawrkt
      421 svvatsfdfd kaestrpkgh cvavrvtsed pddgfkptsg kvqelsfksk pnvwayfsvk
      481 sgggihefsd sqfghvfafg esralaianm vlglkeiqir geirtnvdyt idllhasdyr
      541 enkihtgwld sriamrvrae rppwylsvvg galykasass aamvsdyigy lekgqippkh
      601 islvhsqvsl niegskytid mvrggqgsyr lkmnqseiea eihtlrdggl lmqldgnshv
      661 iyaeeeaagt rllidgrtcl lqndhdpskl vaetpckllr flvsdgsrid adtpyaevev
      721 mkmcmpllsp asgiiqikis egqalqagel iarldlddps avrkaepfhg sfpvlgppta
      781 isgkvhqrca asinaarmil agyehnidev vqsllnclds pelpflqwqe cmsvlaarlp
      841 knlknelesk ykgfeaiscs mnvdfpakll kgvlelhlst cpekergsle rlieplmslv
      901 ksyeggresh arvivrslfe eylsveelfs dniqadvier lrlqykkdll kvvdivlshq
      961 gvksknklif rlleqlvypn paayrdqlir fsalnhtsys elalkasqll eqtklselrs
     1021 siarslsele mftedgetmd tpkrksaine rmealvgapl avedalvglf dhsdhtlqrr
     1081 vvetyvrrly qpylvkgsvr mqwhrsglia swefleehie sknvsedqms deplvekhre
     1141 rkwgamviik slqflpaiis atlrettpnl heetsngsle pttfgnmmhi alvginnqms
     1201 llqdsgdedq aqerinklak ilkdkevgss lrsagvrvis ciiqrdegrt pmrhsfhwst
     1261 eklyyeeepl lrhlepplsi yleldklkgy qniqytpsrd rqwhlytvmd kpvpiqrmfl
     1321 rtlvrqptsd dgltayrgld vdmmrsqsam sftsrsilrs lmgameelei nmhnatlksd
     1381 hahmylcilr eqqindlvpy pkrvdldagq eagvesilee laqelhafvg vrmhklgvce
     1441 wevklwmass gqangawriv vknvtgqtft lhiyreledt skhrvvyhsl svrgplhgvp
     1501 vnaqyqalgv ldrkrllark nnttycydfp lafetalqqs wasqfpgikr pkdkllpkvm
     1561 elvfadqkgn wgtplvpier qpglndvgmv awcmemftpe fpsgrtilvv vndvtfkags
     1621 fgpredaffl avtdlacskk lpliylaans garigvaeev kacfkvgwsn esspergfqy
     1681 vyltpedytk igssviahem klasgesrwv idtivgkedg lgvenltgsg aiagaysray
     1741 ketftltyvt grtvgigayl arlgmrciqr ldqpiiltgf salnkllgre vysshmqlgg
     1801 pkxmatngvv hltvsddleg vsailnwlsc ipphiggplp ilnpsdpper lveylpensc
     1861 dpraaisgal dssgnwkggi fdrdnfvetl egwartvvtg raklggipvg ivavetqtvm
     1921 qvipadpgql dshervvpqa gqvwfpdsat ktaqaimdfn reelplfila nwrgfsggqr
     1981 dlfegilqag stivenlrty kqpvfvyipm mgelrggawv vvdsrinsdh iemyaertak
     2041 gnvlepegmi eikfrtkell ecmgrldqql inmkaklqea ksngahaqmd slqqqirsre
     2101 kqllpvytqi atkfaelhdt slrmaakgvi kevvdwdrsr sffyrrlrrr iaesslvkiv
     2161 kdaagdqlsh ksamdlikkw fldssvakgr edvwvndeaf fswkddlgny seklqelrvq
     2221 kvllqlmnig nsssdiqtlp qglaallskm epssrkqmvd elrkvlg
//
LOCUS       XP_016708274             215 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-binding protein 25 [Gossypium hirsutum].
ACCESSION   XP_016708274
VERSION     XP_016708274.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852785.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708274.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="calmodulin-binding protein 25"
                     /calculated_mol_wt=22940
     Region          112..>134
                     /region_name="VQ"
                     /note="VQ motif; pfam05678"
                     /db_xref="CDD:461711"
     CDS             1..215
                     /gene="LOC107922658"
                     /coded_by="XM_016852785.2:266..913"
                     /db_xref="GeneID:107922658"
ORIGIN      
        1 massssenla nieswefrps fadswlseae altralqdsf stsfsnsdsh slsplfglvn
       61 siplpsptpt psgsnvsgsd pettvkrqrt llkplptgkv skskrksras kfsqttfika
      121 dpanfrqmvq qvtgvrfcna qmslspilkp epqrpgclpt ldtsaflldq qqpssgavsg
      181 sslvplrssd giasaeatld pnsfpcfptl eswka
//
LOCUS       XP_016707201             395 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein S-acyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016707201
VERSION     XP_016707201.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851712.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707201.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..395
                     /product="probable protein S-acyltransferase 1"
                     /calculated_mol_wt=44562
     Region          176..297
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..395
                     /gene="LOC107921893"
                     /coded_by="XM_016851712.2:260..1447"
                     /db_xref="GeneID:107921893"
ORIGIN      
        1 mhstelkdrt krsmrtsksq iydsssieid psppnstpkr syqvwkgnnk fccggriilg
       61 pdasslflts fligcpaiaf cikmalhikp qdtifnhqil lggliltvld lgflfltsfg
      121 dpgiiprntk ppesssdddd lckstsfdwa ngktgtlrlp rikevkletg etvqvkfcet
      181 cllyrspras hcsicnncvq rfdhhcpwvg qcigarnysf ficfisssta lciyvftcsw
      241 vnilrqrtsf wtaisrdvls vililycfiv vwfvggltvf hfylistnqt tyesfryryd
      301 rkenpfnkgi lsnfrqvlfs kispslinlr awtseddtgl sviddngdse tgsknfdvem
      361 gvpkllqkid fdgfdnkpsn sknqdfhdqt kfgia
//
LOCUS       XP_040943477             766 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-phosphate 5-kinase 5 [Gossypium hirsutum].
ACCESSION   XP_040943477
VERSION     XP_040943477.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087543.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..766
                     /product="phosphatidylinositol 4-phosphate 5-kinase 5"
                     /calculated_mol_wt=88139
     Region          61..762
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..766
                     /gene="LOC107921897"
                     /coded_by="XM_041087543.1:386..2686"
                     /db_xref="GeneID:107921897"
ORIGIN      
        1 mskehsgvlr awestmrktq aakkrannif gitsmanvtn ndleddtdkg vsisgeayfa
       61 ekilpngdyy tgqwydnfpd gqgkylwtdg cmylgewhkg ktmgkgrfsw psgasyegef
      121 ktgymdgtgt yigsngdnyk gkwvmnmkhg hgilnysngd cydgewrrgl qeghgkyqwq
      181 nknyyigewk ngvifgkgif vwsngntydg ywedgmpkgn gtyqwpdgsf yvgnwskdpd
      241 eqngtyypse sslaanlewd pttvynelag ckicvgervs impsqkrlat wysskggdkp
      301 rrmsvdgrvs vgverpldkm slwendgnsn glrqvrrdld cellgiphnd anpkfnlglp
      361 lkapklekrq getiskghrn yelmlnlqlg irhsvgrpap atsfdlkasa fdpkdkiwtr
      421 fpregskytp phqsyefkwk dycpvvfrtl rklfkvdpad ymisicgdna lrelsspgks
      481 gsffyltddd rymiktmkks evkmflrmls ayynhvrsfe ntlvikyygl hcvklpgttq
      541 kkvrfiimgn llrsdytihr rfdlkgsslg riteknefet dnttilkdld lnfifklqka
      601 wyqefcwqie kdceflvqer tmdysllvgl hfreistnge lipcqrrnse nestdhisrp
      661 nadqllldpk rwasvklgsn mparvertir kpelelqlvg eqtgecyevi mffgiidilq
      721 dyditkkleh ayksihydpt sisavdpkqy skrfrdfifk vfaedt
//
LOCUS       XP_040943478            1636 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: ferredoxin-dependent glutamate synthase,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943478
VERSION     XP_040943478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087544.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1636
                     /product="LOW QUALITY PROTEIN: ferredoxin-dependent
                     glutamate synthase, chloroplastic"
                     /calculated_mol_wt=177910
     Region          116..1611
                     /region_name="gltB"
                     /note="glutamate synthase subunit alpha; Provisional;
                     PRK11750"
                     /db_xref="CDD:236968"
     CDS             1..1636
                     /gene="LOC107921512"
                     /coded_by="XM_041087544.1:231..5141"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107921512"
ORIGIN      
        1 manlhslspv lhptyrfssd nglllvdfvg lyckskpttr rrlplslntr tmrrfstsaa
       61 nnsvravldh lptttttttt tttttttttt svssasdhqs sasqpkvanl ediisergac
      121 gvgfianlen kashgivqda ltalgcmehr ggcgadndsg dgsglmtsip wdlfdswaan
      181 qgmasfdkmh tgvgmvflpk edslieeakk vivntfrqeg levlgwrsvp vntsvvgfya
      241 ketmpniqqi fvrvvkeenv ddierelyic rklieraaas etwgselyfc slsnqtivyk
      301 gmlrsevlgl fysdlqndly kspfaiyhrr ystntsprwp laqpmrflgh ngeintvqgn
      361 lnwmqsrets lkspvwrgre neirpfgnpk asdsanldsa aellirsgrn pdetlmilvp
      421 eayknhptll akypevvdfy dyykgqmeaw dgpalllfsd gktvgacldr nglrparywr
      481 tidnvvyvas evgvlpvdds kvimkgrlgp gmmitadlls gqvyentevk krvaainayg
      541 kwvsenmrpl kpvnflsttl ldsetilrrq qafgyssedv qmiietmaaq gkeptfcmgd
      601 diplsilsqk ahmlydyfkq rfaqvtnpai dplreglvms levnigkrgn ilevgpenas
      661 qvtlsspvln egelesllkd pqlkaqvlpt ffdirkgieg sldktlyklc eaadeavrng
      721 sqllvlsdra deleatrpai pillavaavh qhliqnglrm sasivadtaq cfsthqfacl
      781 igygasavcp ylaletcrqw rlssktvnlm rngkmptvti eqaqtnfcka ikagllkils
      841 kmgisllssy cgaqifeiyg lgkeivdlaf sgsvskiggl tfdelaretl sfwvkafsed
      901 takrlenfgf iqfrpggeyh annpemskll hkavrekses afsiyqqhla srpvnvlrdl
      961 lefksnrapi pvgkvepals ivqrfctggm slgaisreth eaiavamnrl ggksnsgegg
     1021 edpirwrplt dvvdgysptl phlkglqngd tatsaikqva sgrfgvtptf lanadqleik
     1081 iaqgakpgeg gqlpgkkvsa yiaklrnskp gvplisppph hdiysiedla qlifdlhqvn
     1141 pkakvsvklv aeagigtvas gvakanadii qisghdggtg aspissikha ggpwelglte
     1201 thqtliengl rervilrvdg gfrsgvdvlm aaamgadeyg fgslamiatg cvmarichtn
     1261 ncpvgvasqr eelrarfpgv pgdlvnffly vaeevrgmla qlgyeklddi igrtdllkpr
     1321 dislvktqhl dlnyilsnvg lpkwsstair sqevhsngpv lddillsdpe vshaieneke
     1381 vhktikiynv dravcgriag viakrygdtg fagqinitft gsagqsfacf ltpgmnirli
     1441 geandyvgkg maggelvvxp venpgfcped ativgntcly gatggqifvr gkagerfavr
     1501 nslaqavveg tgdhcceymt ggcvvvlgkv grnvaagmtg glaymldedd tlmpkvnkei
     1561 vkiqrvtapv gqmqlkslie ahvektgsak gsmillewdk ylslfwqlvp pseedtpeac
     1621 aeyqstasek vtlqsa
//
LOCUS       XP_016706470             490 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain and ankyrin repeat-containing protein NOOT2
            [Gossypium hirsutum].
ACCESSION   XP_016706470
VERSION     XP_016706470.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850981.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706470.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="BTB/POZ domain and ankyrin repeat-containing
                     protein NOOT2"
                     /calculated_mol_wt=53729
     Region          9..165
                     /region_name="BTB_POZ_NPR_plant"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in plant
                     regulatory proteins, NPR1-4, and similar proteins;
                     cd18310"
                     /db_xref="CDD:349619"
     Region          200..266
                     /region_name="DUF3420"
                     /note="Domain of unknown function (DUF3420); pfam11900"
                     /db_xref="CDD:314729"
     Region          <268..>366
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          293..321
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          324..355
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..490
                     /gene="LOC107921109"
                     /coded_by="XM_016850981.2:317..1789"
                     /db_xref="GeneID:107921109"
ORIGIN      
        1 mssldeslrs lsldylnlli ngqafsdvtf svegrlvhah rcilaarslf frkffcgpdp
       61 pagldpvgsr mnrgggstag srpgvipvns vgyevfllll qflysgqvsi vpqkhearpn
      121 cseracwhth ctsavdlald tlaaaryfgv eqlalltqkq lasmvekasi edvmkvlias
      181 rkqdmhqlwt tcshlvaksg lppevlakhl pidvvakiee lrlkssltrr sliphhhhhh
      241 hhhhphphhd ltaaadledq kirrmrrald ssdvelvklm vmgeglnlde alalhyaven
      301 csrevvktll elgaanvnyp agpagktplh iaaemvspdm vavlldhhad pnvrtvdgvt
      361 pldilrtlts dflfkgavpg lthiepnklr lclelvqsaa mvisreegsv npptstaiyp
      421 pmsdehnsss sgnnlanlnl dsrlvylnlg atastqmgsr megdddsshn sqreamnrhd
      481 ptmyhhshdf
//
LOCUS       XP_016707697             291 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated tumor suppressor 1 homolog isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016707697
VERSION     XP_016707697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..291
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X1"
                     /calculated_mol_wt=33494
     Region          <96..>249
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..291
                     /gene="LOC107922268"
                     /coded_by="XM_016852208.2:114..989"
                     /db_xref="GeneID:107922268"
ORIGIN      
        1 meeifqtisw eephpsqklp cescsdaded viksegffsq nwrsaspslq pwdgsflypd
       61 waqshnqpgi ssgvvpnqis nhspslkelt nnhsilkrnl ssvsgseral rkkridqayr
      121 ercknhkmem qsnvenlkde ndslkkents llkdyslmnq tlrdqekeie qlrndllqlk
      181 rehekqnvlv ltlsglladp mrleneklkd enaslrknan pncnlpqlae enaklrienk
      241 vlkvqndalc gkiisdddkk heqehldrcf sfrhypqwlq ssfvegrdvt g
//
LOCUS       XP_016707698             285 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated tumor suppressor 1 homolog isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016707698
VERSION     XP_016707698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X2"
                     /calculated_mol_wt=32772
     Region          <96..>249
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..285
                     /gene="LOC107922268"
                     /coded_by="XM_016852209.2:114..971"
                     /db_xref="GeneID:107922268"
ORIGIN      
        1 meeifqtisw eephpsqklp cescsdaded viksegffsq nwrsaspslq pwdgsflypd
       61 waqshnqpgi ssgvvpnqis nhspslkelt nnhsilkrnl ssvsgseral rkkridqayr
      121 ercknhkmem qsnvenlkde ndslkkents llkdyslmnq tlrdqekeie qlrndllqlk
      181 rehekqnvlv ltlsglladp mrleneklkd enaslrknan pncnlpqlae enaklrienk
      241 vlkvqndalc gkiisdddkk heqehfrhyp qwlqssfveg rdvtg
//
LOCUS       XP_016707699             281 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated tumor suppressor 1 homolog isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016707699
VERSION     XP_016707699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..281
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X3"
                     /calculated_mol_wt=32370
     Region          <86..>239
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..281
                     /gene="LOC107922268"
                     /coded_by="XM_016852210.2:80..925"
                     /db_xref="GeneID:107922268"
ORIGIN      
        1 meeifqtisw eephpsqklp cescsdaded nwrsaspslq pwdgsflypd waqshnqpgi
       61 ssgvvpnqis nhspslkelt nnhsilkrnl ssvsgseral rkkridqayr ercknhkmem
      121 qsnvenlkde ndslkkents llkdyslmnq tlrdqekeie qlrndllqlk rehekqnvlv
      181 ltlsglladp mrleneklkd enaslrknan pncnlpqlae enaklrienk vlkvqndalc
      241 gkiisdddkk heqehldrcf sfrhypqwlq ssfvegrdvt g
//
LOCUS       XP_016707700             270 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated tumor suppressor 1 homolog isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_016707700
VERSION     XP_016707700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..270
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X4"
                     /calculated_mol_wt=30920
     Region          <96..>249
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..270
                     /gene="LOC107922268"
                     /coded_by="XM_016852211.2:113..925"
                     /db_xref="GeneID:107922268"
ORIGIN      
        1 meeifqtisw eephpsqklp cescsdaded viksegffsq nwrsaspslq pwdgsflypd
       61 waqshnqpgi ssgvvpnqis nhspslkelt nnhsilkrnl ssvsgseral rkkridqayr
      121 ercknhkmem qsnvenlkde ndslkkents llkdyslmnq tlrdqekeie qlrndllqlk
      181 rehekqnvlv ltlsglladp mrleneklkd enaslrknan pncnlpqlae enaklrienk
      241 vlkvqndalc gkiisdddkk heqehnspqi
//
LOCUS       XP_040943479             255 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated tumor suppressor 1 homolog isoform X5
            [Gossypium hirsutum].
ACCESSION   XP_040943479
VERSION     XP_040943479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087545.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..255
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X5"
                     /calculated_mol_wt=29248
     Region          <86..>255
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..255
                     /gene="LOC107922268"
                     /coded_by="XM_041087545.1:95..862"
                     /db_xref="GeneID:107922268"
ORIGIN      
        1 meeifqtisw eephpsqklp cescsdaded nwrsaspslq pwdgsflypd waqshnqpgi
       61 ssgvvpnqis nhspslkelt nnhsilkrnl ssvsgseral rkkridqayr ercknhkmem
      121 qsnvenlkde ndslkkents llkdyslmnq tlrdqekeie qlrndllqlk rehekqnvlv
      181 ltlsglladp mrleneklkd enaslrknan pncnlpqlae enaklrienk vlkvqndalc
      241 gkiisdddkk heqeq
//
LOCUS       XP_040943480             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880-like [Gossypium hirsutum].
ACCESSION   XP_040943480
VERSION     XP_040943480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087546.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="uncharacterized protein At2g29880-like"
                     /calculated_mol_wt=24979
     Region          21..120
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..223
                     /gene="LOC107921090"
                     /coded_by="XM_041087546.1:993..1664"
                     /db_xref="GeneID:107921090"
ORIGIN      
        1 msgvpesivp sqssrgtkrk wvpeedaalv scmvdlhnig tfnadtgfka gylnelekml
       61 ekalpnamlk arpniesrir llkrdwsivy dmlngqnnsg fgwddhrqvi vaedavwdsy
      121 lkshkeagqf khrsfpyydq ltaiyakdra tgkdaqtaaq taadvleein aedvpsadin
      181 edrneyydcd anvsfddmdv satepqtdkn qgvphlqrgk kef
//
LOCUS       XP_016706349             223 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML35 [Gossypium hirsutum].
ACCESSION   XP_016706349
VERSION     XP_016706349.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706349.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..223
                     /product="probable calcium-binding protein CML35"
                     /calculated_mol_wt=24332
     Region          89..220
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..223
                     /gene="LOC107921007"
                     /coded_by="XM_016850860.2:123..794"
                     /db_xref="GeneID:107921007"
ORIGIN      
        1 mklinrlspk hlfrsnkkgp stvskfdpss yttsgsasss ssesvssvhk gnqyplaptv
       61 gtgtptsvlp etsvdwldfs anfyvelcqa fktmdkdndg vitrseveal lskfarqpps
      121 qeeissmlge vdgdgdgcis letlmnqvag pacepelret fdifdtdhdg kitaeelmaf
      181 ykeklgderc tledcrlmia svdkngdgfv cfddfsrmme mqg
//
LOCUS       XP_016706632             245 aa            linear   PLN 06-AUG-2024
DEFINITION  probable F-box protein At5g04010 [Gossypium hirsutum].
ACCESSION   XP_016706632
VERSION     XP_016706632.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706632.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..245
                     /product="probable F-box protein At5g04010"
                     /calculated_mol_wt=27299
     Region          8..51
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     CDS             1..245
                     /gene="LOC107921271"
                     /coded_by="XM_016851143.2:23..760"
                     /db_xref="GeneID:107921271"
ORIGIN      
        1 msetrsknlp pwealvmvah yldpqtlala scvskswcqa msldvvwrpl csssfpslsn
       61 lkisypsvpy hrlyatglaa fkrrhnppsk prlsidnivf tiqlstkgvp iftiaevask
      121 mnnnqvfkfd vgvkhgsfkg ikgleemkvt wnvvlkgwea iftmmdwqgk lscravegwf
      181 seelpcagcc ssevgsgiva dlkvdmevek vsvgilrvvd wryvsiedgl rylqhfllpc
      241 qcdgm
//
LOCUS       XP_040943481             528 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase-like At2g41451 [Gossypium hirsutum].
ACCESSION   XP_040943481
VERSION     XP_040943481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087547.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..528
                     /product="glycosyltransferase-like At2g41451"
                     /calculated_mol_wt=60105
     CDS             1..528
                     /gene="LOC107921270"
                     /coded_by="XM_041087547.1:210..1796"
                     /db_xref="GeneID:107921270"
ORIGIN      
        1 myiythvfhl ilililmaal syssskpiss syqalnyrll llltllpltv affafilqwq
       61 gglidpllss pdpfqfpgmd ypgsnsrphr rsvsdcvdvl gqsrspafpy fkdwnfefgs
      121 nlrpkicivs staagleqil pwifyhkvig vstfflfveg kaaspvvskv lesipgvevi
      181 yrtkeleeqq aksriwnetw lakffykpcn helfvkqtln memaivmsrd agmdwiihld
      241 tdelihpssa rqysvrqlla dlpedvdmvv fpnyescver ddiiepftev smfkknfdhl
      301 pieaylgnyr rairgnpnyf ltygngkaaa riqdhlrphg ahrwhnymka pkeikldeaa
      361 vlhytytkfs dltsrrdrcg ckptkedvkk cfmlefdraa fiiastatee emlrwyrhhv
      421 vwtnkalnlk llkrgiltri ytpmaiiqgl resgvfgsvl qsaqtlskdk flssvessnf
      481 ssvdkqigvk esqatarril dindnfsggs aipplsppvp ddfhigis
//
LOCUS       XP_040943482             283 aa            linear   PLN 06-AUG-2024
DEFINITION  S-formylglutathione hydrolase [Gossypium hirsutum].
ACCESSION   XP_040943482
VERSION     XP_040943482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087548.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..283
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31604
     Region          1..283
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..283
                     /gene="LOC121213986"
                     /coded_by="XM_041087548.1:128..979"
                     /db_xref="GeneID:121213986"
ORIGIN      
        1 metkpteigs skmfggynkr ykhfsptlgc smtfhiyfpp ssspshkfpi lywlsgltct
       61 denfiiksga qraasaegva liapdtsprg lnvegeadsw dfgvgagfyl natqqkwknw
      121 rmydyvvkel pkllsenfpq ldtskasisg hsmgghgalt iylknldkyk sasafapian
      181 pincpwgqka ftnylgndka aweeydatcl ikkfhnvsat ilidqgeddk fldqllahkf
      241 eeacrsvnvp lllrlqpgyd hsyffistfi ddhirhhaqa lkl
//
LOCUS       XP_040943483             263 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943483
VERSION     XP_040943483.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087549.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..263
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29758
     Region          35..94
                     /region_name="tRNA_int_end_N2"
                     /note="tRNA-splicing endonuclease subunit sen54 N-term;
                     pfam12928"
                     /db_xref="CDD:463754"
     Region          <82..>136
                     /region_name="tRNA_int_end_N2"
                     /note="tRNA-splicing endonuclease subunit sen54 N-term;
                     cl46333"
                     /db_xref="CDD:480673"
     CDS             1..263
                     /gene="LOC121213987"
                     /coded_by="XM_041087549.1:243..1034"
                     /db_xref="GeneID:121213987"
ORIGIN      
        1 mgsddwgscs dnedylqdrn edddeedcys sgflsklqfr kdiskarwvd dlamaevvek
       61 kgkmwvtmgi vrngntycsi eetlflieig alhvldgndi hlslkelyek lsngksgcyw
      121 elfevykhlr slgyvvgrhg ipwsvkgqhi ksgtcslegs qesnemleme pkdensviel
      181 fnnmqitdvs pafnvylpns kfrksspgdp sfvlyisrcs ppsrveieal erkhgaipfk
      241 fchvengrvs ffsfaktelp vlp
//
LOCUS       XP_040943484             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943484
VERSION     XP_040943484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087550.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..258
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=29233
     Region          <38..89
                     /region_name="tRNA_int_end_N2"
                     /note="tRNA-splicing endonuclease subunit sen54 N-term;
                     pfam12928"
                     /db_xref="CDD:463754"
     Region          <77..>131
                     /region_name="tRNA_int_end_N2"
                     /note="tRNA-splicing endonuclease subunit sen54 N-term;
                     cl46333"
                     /db_xref="CDD:480673"
     CDS             1..258
                     /gene="LOC121213987"
                     /coded_by="XM_041087550.1:255..1031"
                     /db_xref="GeneID:121213987"
ORIGIN      
        1 migevvqtmr iifktemrtm mkrivthlgs ypnysldisk arwvddlama evvekkgkmw
       61 vtmgivrngn tycsieetlf lieigalhvl dgndihlslk elyeklsngk sgcywelfev
      121 ykhlrslgyv vgrhgipwsv kgqhiksgtc slegsqesne mlemepkden svielfnnmq
      181 itdvspafnv ylpnskfrks spgdpsfvly isrcsppsrv eiealerkhg aipfkfchve
      241 ngrvsffsfa ktelpvlp
//
LOCUS       XP_040943485             460 aa            linear   PLN 06-AUG-2024
DEFINITION  zeatin O-glucosyltransferase [Gossypium hirsutum].
ACCESSION   XP_040943485
VERSION     XP_040943485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087551.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..460
                     /product="zeatin O-glucosyltransferase"
                     /calculated_mol_wt=51573
     Region          10..438
                     /region_name="GT1_Gtf-like"
                     /note="UDP-glycosyltransferases and similar proteins;
                     cd03784"
                     /db_xref="CDD:340817"
     Site            order(19..20,22,173,176..177,181,208,272,353,355,357..358,
                     361)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,272,353,355,357..358)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..460
                     /gene="LOC121213988"
                     /coded_by="XM_041087551.1:74..1456"
                     /db_xref="GeneID:121213988"
ORIGIN      
        1 mtnqensviv vmvpfpaqgh lnqllhlsri ilsygipvhy vgtsthnrqa kvrvhgwdpv
       61 avasfhfhdc qvppfasppp npnaaikfps hlqpcfdach ylrkpvtell rmlssqarkv
      121 viihdsmmgs vvqdvgsipn tesyafhtvs afslffylwe stgkpqvnae mlgendvpsl
      181 egcftedfle fialqhryln vtsgsiynts kviegtyvdl lrqhmkekqh walgpfnplk
      241 vpeksscgsr hyclewldkq emnsvlyvsf gttttmgdeq iqelaiglrr snqkfiwvlr
      301 dadtgdvfng evrrpelpkg yqdsvkdkgl vvrdwapqle ilahpaiggf vshcgwnscm
      361 esitmgvpig awpvhsdqpr navlitkllk lgitikdwar rdevvtaavv edavkrlmas
      421 kegdeirkra aevsgavrqs vaegevyrke wdsfithiir
//
LOCUS       XP_040943486             368 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRICTOSIDINE SYNTHASE-LIKE 2 [Gossypium hirsutum].
ACCESSION   XP_040943486
VERSION     XP_040943486.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087552.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..368
                     /product="protein STRICTOSIDINE SYNTHASE-LIKE 2"
                     /calculated_mol_wt=40415
     Region          38..>278
                     /region_name="YvrE"
                     /note="Sugar lactone lactonase YvrE [Carbohydrate
                     transport and metabolism]; COG3386"
                     /db_xref="CDD:442613"
     Region          155..243
                     /region_name="Str_synth"
                     /note="Strictosidine synthase; cl22863"
                     /db_xref="CDD:354965"
     CDS             1..368
                     /gene="LOC107922659"
                     /coded_by="XM_041087552.1:154..1260"
                     /db_xref="GeneID:107922659"
ORIGIN      
        1 maskpfiala ttvlffslia vnhfgkpfhg klgemeivpi tdavgpesva fhplgdgpyv
       61 gisdgriikw qpnehrwisf gitspnregc egtddhetre hicgrplgic fhestgdlyi
      121 adaymgllkl gpagglatpi pthaqpqpip stftnsldin qsdgsiyfth tsslyhrrnh
      181 iavvlsgdkt gmllkyeqes kqitvlltnl sfpngvalsq dgsflvfaet tkcrilrywl
      241 stpkagnlet laqlpgfpdn ikrsprggfw vaihsrrckv lswilsyskl gnaliwvlpv
      301 dvitkaysvm skylgsglal riseegvvle tlelesgnkm ssisevqekd dhlwmgsinm
      361 pflgvyrl
//
LOCUS       XP_040943487             571 aa            linear   PLN 06-AUG-2024
DEFINITION  TBCC domain-containing protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943487
VERSION     XP_040943487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087553.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..571
                     /product="TBCC domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=62474
     Region          336..450
                     /region_name="TBCC"
                     /note="Tubulin binding cofactor C; pfam07986"
                     /db_xref="CDD:462331"
     CDS             1..571
                     /gene="LOC121213990"
                     /coded_by="XM_041087553.1:85..1800"
                     /db_xref="GeneID:121213990"
ORIGIN      
        1 msdpmepsts ksdpnpiigp itllhprrep fehgllpiqk liftdplqal iplkqklass
       61 sssssthrvn sdaladalqi sseharlild tlasvlhsep dplvnahpdd vgsvgsdlrd
      121 lilflyiqsy krllprshkd saavadvwps tsafdgylsa lsplqlvrsn trrfmpsqad
      181 eeahqlsylq khlaniisll sepvegegee slvltmegfe hlgfliqfgd kgsegiplsq
      241 aapffansdp dmpavpvpas qvldwlleni asslehitdk isakengpqg gsdqdvamad
      301 assssvrasp sarnccfieg vskssyvkqa sdlkhssvkv inchdsviyi laplryatiy
      361 gcsdativlg avgkavrveh cervhviiaa krvciancre clfflgvnqr plvvgdnhkl
      421 qvapyntfys qleehmtevg iqatmnrwde plalgavdph dslshpagvs daqaesaaql
      481 dpdqftnfli pnwfegesag stkdnpfplp daylksqlrn qknlseikqi lreapleenr
      541 krelscalhv yfkdwlyasg nirqlyclqg d
//
LOCUS       XP_040943488             569 aa            linear   PLN 06-AUG-2024
DEFINITION  TBCC domain-containing protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943488
VERSION     XP_040943488.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087554.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..569
                     /product="TBCC domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=62389
     Region          336..450
                     /region_name="TBCC"
                     /note="Tubulin binding cofactor C; pfam07986"
                     /db_xref="CDD:462331"
     CDS             1..569
                     /gene="LOC121213990"
                     /coded_by="XM_041087554.1:84..1793"
                     /db_xref="GeneID:121213990"
ORIGIN      
        1 msdpmepsts ksdpnpiigp itllhprrep fehgllpiqk liftdplqal iplkqklass
       61 sssssthrvn sdaladalqi sseharlild tlasvlhsep dplvnahpdd vgsvgsdlrd
      121 lilflyiqsy krllprshkd saavadvwps tsafdgylsa lsplqlvrsn trrfmpsqad
      181 eeahqlsylq khlaniisll sepvegegee slvltmegfe hlgfliqfgd kgsegiplsq
      241 aapffansdp dmpavpvpas qvldwlleni asslehitdk isakengpqg gsdqdvamad
      301 assssvrasp sarnccfieg vskssyvkqa sdlkhssvkv inchdsviyi laplryatiy
      361 gcsdativlg avgkavrveh cervhviiaa krvciancre clfflgvnqr plvvgdnhkl
      421 qvapyntfys qleehmtevg iqatmnrwde plalgavdph dslshpagvs daqaesaaql
      481 dpdqftnfli pnwfegesag stkdnpfplp daylksqlrn qknlseikqi lreapleenr
      541 krelscalhv yfkdwlyvef eikmelesv
//
LOCUS       XP_040943489             471 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor TGA10 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943489
VERSION     XP_040943489.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087555.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..471
                     /product="bZIP transcription factor TGA10 isoform X1"
                     /calculated_mol_wt=52792
     Region          88..>211
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          179..231
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          180..231
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(183..184,186..188,190..195,197..199)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(198,201..202,205..206,208..209,212..213,215..216,
                     219..220,222..223,226..227,229..230)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          269..343
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..471
                     /gene="LOC107944815"
                     /coded_by="XM_041087555.1:273..1688"
                     /db_xref="GeneID:107944815"
ORIGIN      
        1 matsrsnmnh siqldhhhhh qnqdhhqshq ipyammqsss sssipanfvs ketgaydlge
       61 ldqalflyld gqdpstiqdq rhhssgikpp tlnifpsqpm hveppsstkt srglvspsts
      121 gskrpsepsm elanprtdni asasapnqpp kavkqregnr kgpttssseq egpktpdpkt
      181 lrrlaqnrea arksrlrkka yvqqlessri rltqleqelq raraqgmffg ggnmlegeqg
      241 lpvginniss eaavfdmeyg rwveehhrlm celraavqeh lpenelrmyv dnclahfdev
      301 mnlkgmaakt dvfhlvsgmw ktpaercfmw iagfrpshli kvilnqiepl teqqimgica
      361 lqqstqeaee alsqglealn qslsdiiisd slscppnmsn ymgqmaiain klstlegfvr
      421 qadnlrrqai hrlhqiltir qvakcllaia eyfhrlrals slwlarprqe q
//
LOCUS       XP_040943490             470 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor TGA10 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943490
VERSION     XP_040943490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087556.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..470
                     /product="bZIP transcription factor TGA10 isoform X2"
                     /calculated_mol_wt=52664
     Region          178..230
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          179..230
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(182..183,185..187,189..194,196..198)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(197,200..201,204..205,207..208,211..212,214..215,
                     218..219,221..222,225..226,228..229)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          268..342
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..470
                     /gene="LOC107944815"
                     /coded_by="XM_041087556.1:273..1685"
                     /db_xref="GeneID:107944815"
ORIGIN      
        1 matsrsnmnh siqldhhhhh qnqdhhqshq ipyammqsss sssipanfvs ketgaydlge
       61 ldqalflyld gqdpstiqdq rhhssgikpp tlnifpsqpm hveppsstkt srglvspsts
      121 gskrpsepsm elanprtdni asasapnqpp kavkregnrk gpttssseqe gpktpdpktl
      181 rrlaqnreaa rksrlrkkay vqqlessrir ltqleqelqr araqgmffgg gnmlegeqgl
      241 pvginnisse aavfdmeygr wveehhrlmc elraavqehl penelrmyvd nclahfdevm
      301 nlkgmaaktd vfhlvsgmwk tpaercfmwi agfrpshlik vilnqieplt eqqimgical
      361 qqstqeaeea lsqglealnq slsdiiisds lscppnmsny mgqmaiaink lstlegfvrq
      421 adnlrrqaih rlhqiltirq vakcllaiae yfhrlralss lwlarprqeq
//
LOCUS       XP_040943491              84 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 9 [Gossypium hirsutum].
ACCESSION   XP_040943491
VERSION     XP_040943491.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087557.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..84
                     /product="zinc transporter 9"
                     /calculated_mol_wt=8867
     Region          <3..>59
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; cl00437"
                     /db_xref="CDD:444905"
     CDS             1..84
                     /gene="LOC121213991"
                     /coded_by="XM_041087557.1:582..836"
                     /db_xref="GeneID:121213991"
ORIGIN      
        1 mahsmiigis lgasespkai kplvaaltfh qffegmglgg cisqikfqgr aiavmglrfr
       61 agiigirdnl grsinrfsvq gshr
//
LOCUS       XP_040943492             233 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L6-1 [Gossypium hirsutum].
ACCESSION   XP_040943492
VERSION     XP_040943492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087558.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..233
                     /product="60S ribosomal protein L6-1"
                     /calculated_mol_wt=26011
     Region          2..61
                     /region_name="Ribosomal_L6e_N"
                     /note="Ribosomal protein L6, N-terminal domain; pfam03868"
                     /db_xref="CDD:427554"
     Region          81..233
                     /region_name="KOW_RPL6"
                     /note="KOW motif of Ribosomal Protein L6; cd13156"
                     /db_xref="CDD:240520"
     Site            order(81,83,99..103,105,116..117,124..128,130,132..135,
                     137..138,163,188,191..192,214,217..219,223..224)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240520"
     CDS             1..233
                     /gene="LOC121213992"
                     /coded_by="XM_041087558.1:148..849"
                     /db_xref="GeneID:121213992"
ORIGIN      
        1 maakrktpvk trnpdlirgv gkysrskmyh krglwaikak nggafprhdp kpkapaaaek
       61 ppkfypaedv kkpllnkrkp kptklrasit pgtvlillag rfmgkrvvfl kqltsglllv
      121 tgpfkingvp lrrvnqsyvi atstkvdisg vnvdkfddky fakevekrkk ktegeffeae
      181 kedkkklped kkedqkavda sliksiegvp dlkaylaarf slksgmkphe lvf
//
LOCUS       XP_040943493             360 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ABHD18 [Gossypium hirsutum].
ACCESSION   XP_040943493
VERSION     XP_040943493.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087559.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..360
                     /product="protein ABHD18"
                     /calculated_mol_wt=40008
     Region          29..352
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..360
                     /gene="LOC121213993"
                     /coded_by="XM_041087559.1:366..1448"
                     /db_xref="GeneID:121213993"
ORIGIN      
        1 mvtvnigmlh yildhvygaf vhrtkitppf fsrgwggtkl ellerlisql fpevegqnwp
       61 psliqpiwrt vwetqnaclr egvfrtpcde qllsalppes qnarvaflvp kdvppqkmac
      121 vvhlagtgdh tferrlrlgg pllkqniatm vlespfygqr rpmlqrgakl lcvsdllllg
      181 ratieearsl lywldseagf gkmgvcglsm ggvhaamvgs lhptpvatlp flsphsavva
      241 fcegilkhat awealredla akeaamtlee vrermrnvls ltdvtrfpip knpnaiifva
      301 atddgyipkh svlelqkawh gsevrwvtgg hvssfllhnn efrkaivdgl nrlewkessl
//
LOCUS       XP_040943494             505 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 93A3 [Gossypium hirsutum].
ACCESSION   XP_040943494
VERSION     XP_040943494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087560.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..505
                     /product="cytochrome P450 93A3"
                     /calculated_mol_wt=57474
     Region          66..495
                     /region_name="CYP93"
                     /note="cytochrome P450 family 93; cd20655"
                     /db_xref="CDD:410748"
     Site            order(101,126,130,138,185,302,305..306,309..310,369,
                     372..373,375,438..441,444..448,451..452)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410748"
     Site            order(211,215,239,301,304..305,373)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410748"
     CDS             1..505
                     /gene="LOC107944571"
                     /coded_by="XM_041087560.1:1..1518"
                     /db_xref="GeneID:107944571"
ORIGIN      
        1 madfqgyflv fflwllsfil frtiltknrt ttrlppspia lpiighlhll apiphqalhk
       61 lstkhgplih irlgsvpcvv asspeiakqf lkthessfsn rpitavvdyl tygsadfsfa
      121 pygpywkfmk kicmsellsg rmldqflpvr reelirffqf mlktanasek vdvggelvrl
      181 tnnivsrmim ndtccnnede aeevrklvev iaklsgqfnl sdfiwfcknl dlqgmnkklk
      241 qvrdkfdsmm driikeheea rktnkddntv kdlldvlldi sqdessemrl trenikafil
      301 dlfvagtdts avtiewalse linhpnimek arqeidivvg kdkivqesdi tnlpylqaiv
      361 ketlrlhpag pmivressed cniegyeipa ktrlfiniwa igrdrdhwen plefrperfv
      421 ngrssqmdvr gqhfhllpfg sgrrscpgts malqvvqtsl aimiqcfdwk vdgsvdmeeg
      481 pgltlprahp licapilrln pfpsc
//
LOCUS       XP_016733872             515 aa            linear   PLN 06-AUG-2024
DEFINITION  3,9-dihydroxypterocarpan 6A-monooxygenase [Gossypium hirsutum].
ACCESSION   XP_016733872
VERSION     XP_016733872.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016733872.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..515
                     /product="3,9-dihydroxypterocarpan 6A-monooxygenase"
                     /calculated_mol_wt=58408
     Region          66..505
                     /region_name="CYP93"
                     /note="cytochrome P450 family 93; cd20655"
                     /db_xref="CDD:410748"
     Site            order(101,126,130,138,185,303,306..307,310..311,370,
                     373..374,376,445..448,451..455,458..459)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410748"
     Site            order(211,215,239,302,305..306,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410748"
     CDS             1..515
                     /gene="LOC107944570"
                     /coded_by="XM_016878383.2:84..1631"
                     /db_xref="GeneID:107944570"
ORIGIN      
        1 madlgdhail vticlatifl flaifvktra kgrrppsppa lpiighlhll rpiphrglhk
       61 lstgygpivs fylgskhcvv vsspeiaeef lrtnetsyld rpkmanfdyl tygtsdfsta
      121 pygprwklmk klcmsevlgp rtlekllpir reeirsflkm iknkaeiggs vdvvaelmtl
      181 tnntisrmtv shrcssdenk adeirkmmre mndlgtkfnl adiiwfcknl dlqgfkkrlv
      241 evrhrydtmm eriikeheee rkkrnesgde vkdfldilld vyedessevk ltrenvkafi
      301 lnlfgagtdt ssttmgwgla eilnnpdvme kareeidcvv gkkrileesd vgnlpylqam
      361 vketlrlhps gpfivrestk acviagyeip adtrlyvnvw slgrnpkqwk nhrefrperf
      421 lnseewqars pwmldvmgnd fnllpfgsgr rscpgaalal sivstvlgcm iqcfewklgd
      481 gagnvdmeek ngmtllrand licfpvarln pfpsi
//
LOCUS       XP_040943495             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943495
VERSION     XP_040943495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087561.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17477
     Region          <39..>112
                     /region_name="COG4454"
                     /note="Uncharacterized copper-binding protein,
                     cupredoxin-like subfamily [General function prediction
                     only]"
                     /db_xref="CDD:443552"
     CDS             1..156
                     /gene="LOC121213994"
                     /coded_by="XM_041087561.1:77..547"
                     /db_xref="GeneID:121213994"
ORIGIN      
        1 mateaasgnk fknhqsfnne vpadgssgps itslrkiqqf skhdtvklve rnfllwkqqi
       61 llilegyglh efvlgtvsil pqsvtdteea mkgfleaeve egslvtlnpn vsyvdelgvl
      121 srsaiivlmr ilrviffelf kfnyvvsrfr snqscy
//
LOCUS       XP_016706429             514 aa            linear   PLN 06-AUG-2024
DEFINITION  3,9-dihydroxypterocarpan 6A-monooxygenase [Gossypium hirsutum].
ACCESSION   XP_016706429
VERSION     XP_016706429.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850940.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706429.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="3,9-dihydroxypterocarpan 6A-monooxygenase"
                     /calculated_mol_wt=58276
     Region          70..507
                     /region_name="CYP93"
                     /note="cytochrome P450 family 93; cd20655"
                     /db_xref="CDD:410748"
     Site            order(105,130,134,142,189,307,310..311,314..315,374,
                     377..378,380,448..451,454..458,461..462)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410748"
     Site            order(215,219,243,306,309..310,378)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410748"
     CDS             1..514
                     /gene="LOC107921086"
                     /coded_by="XM_016850940.2:78..1622"
                     /db_xref="GeneID:107921086"
ORIGIN      
        1 malisidvqy yfqcfiwfit vvllhsfmkn ilkhqdpepp spfslpfigh lhmvtsvlpk
       61 sfqalakryg plmrirlgas scvvvsnaiv akeifktqel nfcsrpefgs seyfiyrgsr
      121 fvlaqygdyw rfmkklcmtr llavpqldkf adirdqekvm lveyvmkrck egkpcdlsse
      181 lttltnntic rmamstrcsg ndndaseiee lirtclklsg kisigdvlgp lkvldfsgng
      241 kklkaallky drlveriiqe hqekaikgyy denqeqdlld illevyrdpt aevkismkdi
      301 ksflldifma gtdtsssamq wamgelinnp kafhklrdei ntivgpnrli kesdipnlpy
      361 lraviretlr lhpsapliir ecgedctvng fmvkaktrvl vncyavmrdp dswknpdefd
      421 perfldssde kigehqmefk gqnfrflpfg sgrrgcpgas lamlvmhaav gslvqcfdwe
      481 vkggekvnln pgpgfgsema qplvcypilr fnpf
//
LOCUS       XP_016706397             346 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH130 [Gossypium hirsutum].
ACCESSION   XP_016706397
VERSION     XP_016706397.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706397.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..346
                     /product="transcription factor bHLH130"
                     /calculated_mol_wt=37765
     Region          273..326
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(273..274,277..278,280..281,285,303..304)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     Site            order(283..284,287,290..291,294,304..305,308..309,312,315,
                     318..319,322,325..326)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..346
                     /gene="LOC107921052"
                     /coded_by="XM_016850908.2:519..1559"
                     /db_xref="GeneID:107921052"
ORIGIN      
        1 mdssthqsyq nqnnqsnsgl lrfrsapssl latvdcgvnk ggfesrfins ssggdneted
       61 ksgsvaavny ansaptysgl ppqyprqssa mdnsyellgl nhhsqgkpvt sslmrqsssp
      121 pglftnlsvq ngfsgmkglg nycgvngtsg elspssnrlk nqisfssrqp sslgilsqis
      181 eienenlgan sfdggkpeyq cgswnesaql tekhklftnn qngdigsgvh vlprhlslpk
      241 tsnemavmek ylqfqdsvpc kirakrgcat hprsiaervr rtrisermrk lqelvpnmdk
      301 qtntadmldl aveyikdlqk qfktlsdnra nckclntqkt vpnqil
//
LOCUS       XP_016707801             642 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein kinase-like protein ZAR1 [Gossypium hirsutum].
ACCESSION   XP_016707801
VERSION     XP_016707801.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707801.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..642
                     /product="receptor protein kinase-like protein ZAR1"
                     /calculated_mol_wt=70143
     Region          23..64
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <71..>213
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          92..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..639
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(346..349,352,354,372,374,404,420..423,474,478..479,
                     481,491..492)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..642
                     /gene="LOC107922326"
                     /coded_by="XM_016852312.2:296..2224"
                     /db_xref="GeneID:107922326"
ORIGIN      
        1 mmlrlvlevv sflflftslv sslnsdglsl lalkaavesd pnrcleswse sdatpchwlg
       61 igctrkrvts iflpnkgltg yipselglld sltrlslaqn nfsklipyhl fnatnlvyid
      121 lshnslsgsv ppqikslknl thldlssnsl ngslpeslve lkslrgtlnl sfnkfsgeip
      181 asygefpvmi sldlrhnnlt gkvpqvgslv nqgptaftgn pnlcgfplgn lcpeaqnpra
      241 ilnpeenpen pkgltpvfyd gngdkhkeki gsvaaplisg vsvvigavsv lvwlvrrkwk
      301 tgedkmgkek kreeveeegq ngkfmvvdeg faleledllr asayvvgksr sgivykvvag
      361 rgsgtlgstv vavrrlsegd aplkfkefea eveaigrvnh pnivrlrayy yaddekllvt
      421 dfirngslya alhggptdnl pplswaarlr viqgtarglm yihessprky vhgnlkstki
      481 lldkelqpyi sgfgltrlvs gtskyassit kklistqtva vgsristpns ylapearvyg
      541 skfaqkcdvy sfgivllevl tgqlpdagpe ndeegleglv rkafreerpl seiidstllt
      601 evyakkqvva afhialncte ldpelrprmr tvsesldrik lq
//
LOCUS       XP_040943496             361 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH48 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943496
VERSION     XP_040943496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087562.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..361
                     /product="transcription factor bHLH48 isoform X1"
                     /calculated_mol_wt=39834
     Region          189..274
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(204..205,208..209,211..212,216,234..235)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(214..215,218,221..222,225,235..236,239..240,243,246,
                     249..250,253,256..257,259..260,263,266..267,270,273..274)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..361
                     /gene="LOC121213998"
                     /coded_by="XM_041087562.1:111..1196"
                     /db_xref="GeneID:121213998"
ORIGIN      
        1 mesnagttet rsnvtvpdgg evaafeslqf tdeihrlisa pgtdnassft allelpatqv
       61 vellhspesv klivasapnv edfkgsfhfp sntgliqkda rfsvfsgegn nkneksnspe
      121 mtsknssanl ekavksepae tvsslplvsd ptmenrnikr kdrekkvkgs tkksktatne
      181 rledaeklpy vhvrarrgqa tdshslaera rrekinarmk llqelvpgcn kisgtalvld
      241 eiinhvqslq rqveflsmrl atvnpridfn ldslftpesg stmdggnfps lvtpliwpdv
      301 qvngyrkqfq hqwhfdtlkq piwgreevcn nyvtlensll scdssansaa tlhanqlkme
      361 l
//
LOCUS       XP_040943497             360 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH48 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943497
VERSION     XP_040943497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087563.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..360
                     /product="transcription factor bHLH48 isoform X2"
                     /calculated_mol_wt=39763
     Region          189..274
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(204..205,208..209,211..212,216,234..235)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(214..215,218,221..222,225,235..236,239..240,243,246,
                     249..250,253,256..257,259..260,263,266..267,270,273..274)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..360
                     /gene="LOC121213998"
                     /coded_by="XM_041087563.1:110..1192"
                     /db_xref="GeneID:121213998"
ORIGIN      
        1 mesnagttet rsnvtvpdgg evaafeslqf tdeihrlisa pgtdnassft allelpatqv
       61 vellhspesv klivasapnv edfkgsfhfp sntgliqkda rfsvfsgegn nkneksnspe
      121 mtsknssanl ekavksepae tvsslplvsd ptmenrnikr kdrekkvkgs tkksktatne
      181 rledaeklpy vhvrarrgqa tdshslaera rrekinarmk llqelvpgcn kisgtalvld
      241 eiinhvqslq rqveflsmrl atvnpridfn ldslftpesg stmdggnfps lvtpliwpdv
      301 qvngyrkqfq hqwhfdtlkq piwgreevcn nyvtlensll scdssansat lhanqlkmel
//
LOCUS       XP_040943498             338 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH60 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943498
VERSION     XP_040943498.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087564.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..338
                     /product="transcription factor bHLH60 isoform X3"
                     /calculated_mol_wt=37289
     Region          189..251
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..338
                     /gene="LOC121213998"
                     /coded_by="XM_041087564.1:112..1128"
                     /db_xref="GeneID:121213998"
ORIGIN      
        1 mesnagttet rsnvtvpdgg evaafeslqf tdeihrlisa pgtdnassft allelpatqv
       61 vellhspesv klivasapnv edfkgsfhfp sntgliqkda rfsvfsgegn nkneksnspe
      121 mtsknssanl ekavksepae tvsslplvsd ptmenrnikr kdrekkvkgs tkksktatne
      181 rledaeklpy vhvrarrgqa tdshslaera rrekinarmk llqelvpgcn kflsmrlatv
      241 npridfnlds lftpesgstm dggnfpslvt pliwpdvqvn gyrkqfqhqw hfdtlkqpiw
      301 greevcnnyv tlensllscd ssansaatlh anqlkmel
//
LOCUS       XP_016707642             169 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger A20 and AN1 domain-containing stress-associated protein
            8 [Gossypium hirsutum].
ACCESSION   XP_016707642
VERSION     XP_016707642.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852153.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707642.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 8"
                     /calculated_mol_wt=17862
     Region          16..39
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          110..147
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..169
                     /gene="LOC107922236"
                     /coded_by="XM_016852153.2:218..727"
                     /db_xref="GeneID:107922236"
ORIGIN      
        1 mdpldetgrq asegpilcvn ncgffgsaat mnmcskchka milkqeqaql vassidsivn
       61 gstsgngkep svaaalavqc gnfgskiess idpshmtfgg mktkegpnrc nachkrvglt
      121 gfscrcgnif caahrysdkh ncpfdyrtaa rdaiakanpv vraekldki
//
LOCUS       XP_016707644             169 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger A20 and AN1 domain-containing stress-associated protein
            8 [Gossypium hirsutum].
ACCESSION   XP_016707644
VERSION     XP_016707644.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852155.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707644.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..169
                     /product="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 8"
                     /calculated_mol_wt=17862
     Region          16..39
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          110..147
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..169
                     /gene="LOC107922236"
                     /coded_by="XM_016852155.2:148..657"
                     /db_xref="GeneID:107922236"
ORIGIN      
        1 mdpldetgrq asegpilcvn ncgffgsaat mnmcskchka milkqeqaql vassidsivn
       61 gstsgngkep svaaalavqc gnfgskiess idpshmtfgg mktkegpnrc nachkrvglt
      121 gfscrcgnif caahrysdkh ncpfdyrtaa rdaiakanpv vraekldki
//
LOCUS       XP_040943499             280 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 6 [Gossypium hirsutum].
ACCESSION   XP_040943499
VERSION     XP_040943499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087565.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..280
                     /product="chaperone protein dnaJ 6"
                     /calculated_mol_wt=31979
     Region          29..91
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(57..59,68,71..72,75..76)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..280
                     /gene="LOC121213999"
                     /coded_by="XM_041087565.1:309..1151"
                     /db_xref="GeneID:121213999"
ORIGIN      
        1 mgkrknsgvs rdeeeeveve nhsssneksl yevlnvakta sqqeikkayy klalrlhpdk
       61 npgdeeakek fqqlqkvisi lgdeekravy dqtgcvddad lagdvvenlk tfframykkv
      121 teadieefev nyrgsdseke dlfdlykkck gnmnklfcsm lcsdpkldsh rfkdlldeai
      181 aagelketka ygkwankvte mkpptsplrr kekfvkqses dllaiisqrr serkdrfdsm
      241 fstlvskygg nadsepteee feaarrkves rkasnkskhk
//
LOCUS       XP_040943500             643 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943500
VERSION     XP_040943500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087566.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..643
                     /product="serine/threonine-protein kinase Nek6 isoform X1"
                     /calculated_mol_wt=70877
     Region          14..269
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(21..25,29,42,44,75,92..95,99,101,140,142,144..145,
                     147,158,161,163,176..179)
                     /site_type="active"
                     /db_xref="CDD:270855"
     Site            order(21..22,24..25,29,42,44,75,93..95,99,145,147,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270855"
     Site            order(25,99,101,140,142,144,161,176..179)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(157..165,172..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..643
                     /gene="LOC121214000"
                     /coded_by="XM_041087566.1:218..2149"
                     /db_xref="GeneID:121214000"
ORIGIN      
        1 mashngdgks kmedyevieq igrgafgaaf lvlhklekik yvlkrirlak qtekfkrtah
       61 qemeliakln npyiveykda wvdkgnsici vtsyceggdm aelikkargm hfpeekickw
      121 mtqlllavdy lhsnrvlhrd mkcsnifltk dndirlgdfg lakllntedl assvvgtpny
      181 mcpelladip ygyksdiwsl gccmfeiaah qpafrapdma glvnkinrss isplpilyss
      241 mlkqiiksml rknpehrpta aellrhphlq phvlrcrnps tvylpvkptn spkektprks
      301 fsnkpgigkd rgfgikdagv sngqrnihpf prmadvhvsc spthekpass astkdnpvtk
      361 rvdptscave iskatsdskd tstdsevsvs ngdkqaqlrs vprkdadves tsetafnskh
      421 deqeeptfeh tqnfpeadmk tknkkdetic dvqvleeaak evldisrdss kltissiscd
      481 dkngyrddgs ssstiyetdv dricsstktc shnattegad tsylssesna vhpsageaga
      541 asenntkdsa rpvhltasdv sllskltams gdeiksvwen psqeradale sllelcaqll
      601 kqdkidelag vlrpfgeevv ssretaiwlt kslmaaqkft gat
//
LOCUS       XP_040943501             643 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943501
VERSION     XP_040943501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087567.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..643
                     /product="serine/threonine-protein kinase Nek6 isoform X1"
                     /calculated_mol_wt=70877
     Region          14..269
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(21..25,29,42,44,75,92..95,99,101,140,142,144..145,
                     147,158,161,163,176..179)
                     /site_type="active"
                     /db_xref="CDD:270855"
     Site            order(21..22,24..25,29,42,44,75,93..95,99,145,147,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270855"
     Site            order(25,99,101,140,142,144,161,176..179)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(157..165,172..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..643
                     /gene="LOC121214000"
                     /coded_by="XM_041087567.1:301..2232"
                     /db_xref="GeneID:121214000"
ORIGIN      
        1 mashngdgks kmedyevieq igrgafgaaf lvlhklekik yvlkrirlak qtekfkrtah
       61 qemeliakln npyiveykda wvdkgnsici vtsyceggdm aelikkargm hfpeekickw
      121 mtqlllavdy lhsnrvlhrd mkcsnifltk dndirlgdfg lakllntedl assvvgtpny
      181 mcpelladip ygyksdiwsl gccmfeiaah qpafrapdma glvnkinrss isplpilyss
      241 mlkqiiksml rknpehrpta aellrhphlq phvlrcrnps tvylpvkptn spkektprks
      301 fsnkpgigkd rgfgikdagv sngqrnihpf prmadvhvsc spthekpass astkdnpvtk
      361 rvdptscave iskatsdskd tstdsevsvs ngdkqaqlrs vprkdadves tsetafnskh
      421 deqeeptfeh tqnfpeadmk tknkkdetic dvqvleeaak evldisrdss kltissiscd
      481 dkngyrddgs ssstiyetdv dricsstktc shnattegad tsylssesna vhpsageaga
      541 asenntkdsa rpvhltasdv sllskltams gdeiksvwen psqeradale sllelcaqll
      601 kqdkidelag vlrpfgeevv ssretaiwlt kslmaaqkft gat
//
LOCUS       XP_040943502             643 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943502
VERSION     XP_040943502.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087568.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..643
                     /product="serine/threonine-protein kinase Nek6 isoform X1"
                     /calculated_mol_wt=70877
     Region          14..269
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(21..25,29,42,44,75,92..95,99,101,140,142,144..145,
                     147,158,161,163,176..179)
                     /site_type="active"
                     /db_xref="CDD:270855"
     Site            order(21..22,24..25,29,42,44,75,93..95,99,145,147,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270855"
     Site            order(25,99,101,140,142,144,161,176..179)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(157..165,172..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..643
                     /gene="LOC121214000"
                     /coded_by="XM_041087568.1:191..2122"
                     /db_xref="GeneID:121214000"
ORIGIN      
        1 mashngdgks kmedyevieq igrgafgaaf lvlhklekik yvlkrirlak qtekfkrtah
       61 qemeliakln npyiveykda wvdkgnsici vtsyceggdm aelikkargm hfpeekickw
      121 mtqlllavdy lhsnrvlhrd mkcsnifltk dndirlgdfg lakllntedl assvvgtpny
      181 mcpelladip ygyksdiwsl gccmfeiaah qpafrapdma glvnkinrss isplpilyss
      241 mlkqiiksml rknpehrpta aellrhphlq phvlrcrnps tvylpvkptn spkektprks
      301 fsnkpgigkd rgfgikdagv sngqrnihpf prmadvhvsc spthekpass astkdnpvtk
      361 rvdptscave iskatsdskd tstdsevsvs ngdkqaqlrs vprkdadves tsetafnskh
      421 deqeeptfeh tqnfpeadmk tknkkdetic dvqvleeaak evldisrdss kltissiscd
      481 dkngyrddgs ssstiyetdv dricsstktc shnattegad tsylssesna vhpsageaga
      541 asenntkdsa rpvhltasdv sllskltams gdeiksvwen psqeradale sllelcaqll
      601 kqdkidelag vlrpfgeevv ssretaiwlt kslmaaqkft gat
//
LOCUS       XP_040943503             581 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943503
VERSION     XP_040943503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087569.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..581
                     /product="serine/threonine-protein kinase Nek6 isoform X2"
                     /calculated_mol_wt=63750
     Region          1..207
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(37,39,78,80,82,99,114..117)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(95..103,110..117)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..581
                     /gene="LOC121214000"
                     /coded_by="XM_041087569.1:99..1844"
                     /db_xref="GeneID:121214000"
ORIGIN      
        1 meliaklnnp yiveykdawv dkgnsicivt syceggdmae likkargmhf peekickwmt
       61 qlllavdylh snrvlhrdmk csnifltkdn dirlgdfgla kllntedlas svvgtpnymc
      121 pelladipyg yksdiwslgc cmfeiaahqp afrapdmagl vnkinrssis plpilyssml
      181 kqiiksmlrk npehrptaae llrhphlqph vlrcrnpstv ylpvkptnsp kektprksfs
      241 nkpgigkdrg fgikdagvsn gqrnihpfpr madvhvscsp thekpassas tkdnpvtkrv
      301 dptscaveis katsdskdts tdsevsvsng dkqaqlrsvp rkdadvests etafnskhde
      361 qeeptfehtq nfpeadmktk nkkdeticdv qvleeaakev ldisrdsskl tissiscddk
      421 ngyrddgsss stiyetdvdr icsstktcsh nattegadts ylssesnavh psageagaas
      481 enntkdsarp vhltasdvsl lskltamsgd eiksvwenps qeradalesl lelcaqllkq
      541 dkidelagvl rpfgeevvss retaiwltks lmaaqkftga t
//
LOCUS       XP_040943504             581 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943504
VERSION     XP_040943504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087570.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..581
                     /product="serine/threonine-protein kinase Nek6 isoform X2"
                     /calculated_mol_wt=63750
     Region          1..207
                     /region_name="STKc_Nek"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase; cd08215"
                     /db_xref="CDD:270855"
     Site            order(37,39,78,80,82,99,114..117)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270855"
     Site            order(95..103,110..117)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270855"
     CDS             1..581
                     /gene="LOC121214000"
                     /coded_by="XM_041087570.1:1008..2753"
                     /db_xref="GeneID:121214000"
ORIGIN      
        1 meliaklnnp yiveykdawv dkgnsicivt syceggdmae likkargmhf peekickwmt
       61 qlllavdylh snrvlhrdmk csnifltkdn dirlgdfgla kllntedlas svvgtpnymc
      121 pelladipyg yksdiwslgc cmfeiaahqp afrapdmagl vnkinrssis plpilyssml
      181 kqiiksmlrk npehrptaae llrhphlqph vlrcrnpstv ylpvkptnsp kektprksfs
      241 nkpgigkdrg fgikdagvsn gqrnihpfpr madvhvscsp thekpassas tkdnpvtkrv
      301 dptscaveis katsdskdts tdsevsvsng dkqaqlrsvp rkdadvests etafnskhde
      361 qeeptfehtq nfpeadmktk nkkdeticdv qvleeaakev ldisrdsskl tissiscddk
      421 ngyrddgsss stiyetdvdr icsstktcsh nattegadts ylssesnavh psageagaas
      481 enntkdsarp vhltasdvsl lskltamsgd eiksvwenps qeradalesl lelcaqllkq
      541 dkidelagvl rpfgeevvss retaiwltks lmaaqkftga t
//
LOCUS       XP_040943505             523 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase Nek6 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943505
VERSION     XP_040943505.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087571.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..523
                     /product="serine/threonine-protein kinase Nek6 isoform X3"
                     /calculated_mol_wt=57087
     Region          <1..149
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..523
                     /gene="LOC121214000"
                     /coded_by="XM_041087571.1:129..1700"
                     /db_xref="GeneID:121214000"
ORIGIN      
        1 mtqlllavdy lhsnrvlhrd mkcsnifltk dndirlgdfg lakllntedl assvvgtpny
       61 mcpelladip ygyksdiwsl gccmfeiaah qpafrapdma glvnkinrss isplpilyss
      121 mlkqiiksml rknpehrpta aellrhphlq phvlrcrnps tvylpvkptn spkektprks
      181 fsnkpgigkd rgfgikdagv sngqrnihpf prmadvhvsc spthekpass astkdnpvtk
      241 rvdptscave iskatsdskd tstdsevsvs ngdkqaqlrs vprkdadves tsetafnskh
      301 deqeeptfeh tqnfpeadmk tknkkdetic dvqvleeaak evldisrdss kltissiscd
      361 dkngyrddgs ssstiyetdv dricsstktc shnattegad tsylssesna vhpsageaga
      421 asenntkdsa rpvhltasdv sllskltams gdeiksvwen psqeradale sllelcaqll
      481 kqdkidelag vlrpfgeevv ssretaiwlt kslmaaqkft gat
//
LOCUS       XP_040943506              78 aa            linear   PLN 06-AUG-2024
DEFINITION  arabinogalactan protein 23 [Gossypium hirsutum].
ACCESSION   XP_040943506
VERSION     XP_040943506.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087572.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..78
                     /product="arabinogalactan protein 23"
                     /calculated_mol_wt=7298
     CDS             1..78
                     /gene="LOC121214001"
                     /coded_by="XM_041087572.1:108..344"
                     /db_xref="GeneID:121214001"
ORIGIN      
        1 mdmkkiscav ivaaasmsav laagaspaps pasapaaaaa sasasgpgpd ssiaistmpv
       61 ieslvgatlv sffayflq
//
LOCUS       XP_016707607              78 aa            linear   PLN 06-AUG-2024
DEFINITION  arabinogalactan protein 23 [Gossypium hirsutum].
ACCESSION   XP_016707607
VERSION     XP_016707607.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707607.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..78
                     /product="arabinogalactan protein 23"
                     /calculated_mol_wt=7343
     CDS             1..78
                     /gene="LOC107922214"
                     /coded_by="XM_016852118.2:111..347"
                     /db_xref="GeneID:107922214"
ORIGIN      
        1 mdmkkiscav ivaaasmsav laadsapapa pasapgaasa sasaaapgpd snvatstmpv
       61 lvslvgatlv sffsyylq
//
LOCUS       XP_040943507              82 aa            linear   PLN 06-AUG-2024
DEFINITION  arabinogalactan protein 23 [Gossypium hirsutum].
ACCESSION   XP_040943507
VERSION     XP_040943507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087573.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..82
                     /product="arabinogalactan protein 23"
                     /calculated_mol_wt=7619
     CDS             1..82
                     /gene="LOC121214003"
                     /coded_by="XM_041087573.1:113..361"
                     /db_xref="GeneID:121214003"
ORIGIN      
        1 mdmkkiscav ivavaasmse vmaagapspa pasapggasa sasasasaaa pgpdssvais
       61 tmpvlgslvg atlvsffayy lq
//
LOCUS       XP_016708128             516 aa            linear   PLN 06-AUG-2024
DEFINITION  carboxyl-terminal-processing peptidase 3, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016708128
VERSION     XP_016708128.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852639.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708128.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..516
                     /product="carboxyl-terminal-processing peptidase 3,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=55140
     Region          118..487
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     CDS             1..516
                     /gene="LOC107922556"
                     /coded_by="XM_016852639.2:227..1777"
                     /db_xref="GeneID:107922556"
ORIGIN      
        1 meplcpnfdl lksssvplfs hrlssinrgi skrssasfpc vssynrncnh qasvkteapp
       61 qqqptgpdli ksltkgfvgf aaaatalasv csdspafaes ltvafpvsra qevntvqrtl
      121 veawgliret fvdptfnhqd wdlklqqtmv emfplksada aygkirgmls tlgdpftrii
      181 spkeyqsfri gsdgnlqgvg lfitvepktg hlivlscveg spaaragihd gdelieingq
      241 rldgvdseaa aqrlrgqagt svtvklhrgn gsgsgssike vklprelirl spisstviph
      301 rtpdgrltkt gyvklstfsq taatemknti hemenlgvqs yildlrnnpg glvkvgldva
      361 kiwldgnetl vntvdrdghm spinmangha lthdplvvlv negsasasei lagalhdngr
      421 ailvghktfg kgkiqsitel hdgsalfvtv akylspalhd idqvgitpdv qcttemlnsp
      481 ketlkgkssv ssleadscim vaeheldiqe skgtas
//
LOCUS       XP_040943509             449 aa            linear   PLN 06-AUG-2024
DEFINITION  carboxyl-terminal-processing peptidase 3, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943509
VERSION     XP_040943509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087575.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..449
                     /product="carboxyl-terminal-processing peptidase 3,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=48228
     Region          118..435
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     CDS             1..449
                     /gene="LOC107922556"
                     /coded_by="XM_041087575.1:141..1490"
                     /db_xref="GeneID:107922556"
ORIGIN      
        1 meplcpnfdl lksssvplfs hrlssinrgi skrssasfpc vssynrncnh qasvkteapp
       61 qqqptgpdli ksltkgfvgf aaaatalasv csdspafaes ltvafpvsra qevntvqrtl
      121 veawgliret fvdptfnhqd wdlklqqtmv emfplksada aygkirgmls tlgdpftrii
      181 spkeyqsfri gsdgnlqgvg lfitvepktg hlivlscveg spaaragihd gdelieingq
      241 rldgvdseaa aqrlrgqagt svtvklhrgn gsgsgssike vklprelirl spisstviph
      301 rtpdgrltkt gyvklstfsq taatemknti hemenlgvqs yildlrnnpg glvkvgldva
      361 kiwldgnetl vntvdrdghm spinmangha lthdplvvlv negsasasei lagalhdngr
      421 ailvghktfg kgkiqcrvsr symmdllfs
//
LOCUS       XP_040943510             368 aa            linear   PLN 06-AUG-2024
DEFINITION  carboxyl-terminal-processing peptidase 3, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943510
VERSION     XP_040943510.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087576.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..368
                     /product="carboxyl-terminal-processing peptidase 3,
                     chloroplastic isoform X3"
                     /calculated_mol_wt=39016
     Region          6..339
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     CDS             1..368
                     /gene="LOC107922556"
                     /coded_by="XM_041087576.1:259..1365"
                     /db_xref="GeneID:107922556"
ORIGIN      
        1 mvemfplksa daaygkirgm lstlgdpftr iispkeyqsf rigsdgnlqg vglfitvepk
       61 tghlivlscv egspaaragi hdgdeliein gqrldgvdse aaaqrlrgqa gtsvtvklhr
      121 gngsgsgssi kevklpreli rlspisstvi phrtpdgrlt ktgyvklstf sqtaatemkn
      181 tihemenlgv qsyildlrnn pgglvkvgld vakiwldgne tlvntvdrdg hmspinmang
      241 halthdplvv lvnegsasas eilagalhdn grailvghkt fgkgkiqsit elhdgsalfv
      301 tvakylspal hdidqvgitp dvqcttemln spketlkgks svssleadsc imvaeheldi
      361 qeskgtas
//
LOCUS       XP_040943511             325 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943511
VERSION     XP_040943511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087577.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X1"
                     /calculated_mol_wt=36906
     Region          <7..274
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..325
                     /gene="LOC121214005"
                     /coded_by="XM_041087577.1:185..1162"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitemvkll hpwvskpnpw fpskikekif
      301 iyhlrlpppp apfcslflfn wshfg
//
LOCUS       XP_040943512             325 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943512
VERSION     XP_040943512.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087578.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X1"
                     /calculated_mol_wt=36906
     Region          <7..274
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..325
                     /gene="LOC121214005"
                     /coded_by="XM_041087578.1:162..1139"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitemvkll hpwvskpnpw fpskikekif
      301 iyhlrlpppp apfcslflfn wshfg
//
LOCUS       XP_040943513             325 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943513
VERSION     XP_040943513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087579.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..325
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X1"
                     /calculated_mol_wt=36906
     Region          <7..274
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..325
                     /gene="LOC121214005"
                     /coded_by="XM_041087579.1:168..1145"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitemvkll hpwvskpnpw fpskikekif
      301 iyhlrlpppp apfcslflfn wshfg
//
LOCUS       XP_040943514             316 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943514
VERSION     XP_040943514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087580.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X2"
                     /calculated_mol_wt=35221
     Region          <7..288
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          260..284
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..316
                     /gene="LOC121214005"
                     /coded_by="XM_041087580.1:185..1135"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitassdtt aklwsmtsge eiktyqghhk
      301 atvccalhdg aepsps
//
LOCUS       XP_040943515             316 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943515
VERSION     XP_040943515.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087581.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X2"
                     /calculated_mol_wt=35221
     Region          <7..288
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          260..284
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..316
                     /gene="LOC121214005"
                     /coded_by="XM_041087581.1:185..1135"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitassdtt aklwsmtsge eiktyqghhk
      301 atvccalhdg aepsps
//
LOCUS       XP_040943516             316 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943516
VERSION     XP_040943516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087582.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X2"
                     /calculated_mol_wt=35221
     Region          <7..288
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          260..284
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..316
                     /gene="LOC121214005"
                     /coded_by="XM_041087582.1:162..1112"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitassdtt aklwsmtsge eiktyqghhk
      301 atvccalhdg aepsps
//
LOCUS       XP_040943518             316 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943518
VERSION     XP_040943518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087584.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X2"
                     /calculated_mol_wt=35221
     Region          <7..288
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          260..284
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..316
                     /gene="LOC121214005"
                     /coded_by="XM_041087584.1:167..1117"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitassdtt aklwsmtsge eiktyqghhk
      301 atvccalhdg aepsps
//
LOCUS       XP_040943519             316 aa            linear   PLN 06-AUG-2024
DEFINITION  target of rapamycin complex subunit LST8-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943519
VERSION     XP_040943519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087585.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="target of rapamycin complex subunit LST8-1
                     isoform X2"
                     /calculated_mol_wt=35221
     Region          <7..288
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          39..76
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          81..117
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          123..158
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..254
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          260..284
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..316
                     /gene="LOC121214005"
                     /coded_by="XM_041087585.1:163..1113"
                     /db_xref="GeneID:121214005"
ORIGIN      
        1 mtqpsvilat asydhtirfw eaksgrcyrt iqypdsqvnr leitpdkryl aaagnphirl
       61 fdinssspqp vmsydshtnn vmavgfqcdg kwmysgsedg tvkiwdlrap gcqreyesrg
      121 avntvvlhpn qtelisgdqn gnirvwdlta nscscelvpe vdtavrsltv mwdgslvvaa
      181 nnhgtcyvwr llrgnqtmtn feplhklqah ngyilkclls pefcephryl atassdhtvk
      241 iwnvdgftle ktlighqrwv wdcvfsvdga ylitassdtt aklwsmtsge eiktyqghhk
      301 atvccalhdg aepsps
//
LOCUS       XP_040943520             381 aa            linear   PLN 06-AUG-2024
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase 2 [Gossypium
            hirsutum].
ACCESSION   XP_040943520
VERSION     XP_040943520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087586.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..381
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     2"
                     /calculated_mol_wt=42811
     Region          1..372
                     /region_name="PLN02380"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /db_xref="CDD:178006"
     CDS             1..381
                     /gene="LOC121214006"
                     /coded_by="XM_041087586.1:326..1471"
                     /db_xref="GeneID:121214006"
ORIGIN      
        1 maiaaatviv plgilffisg lfvnliqavc fvlirplskk tyrkinrvva ellwlqlvwl
       61 vdwwagvkin vfadnesfsl mgkehalllp nhrsdidwlv gwvlaqrsgc lgssiavmkk
      121 sskflpvigw smwfseylfl erswakdent ikaglqrlrd ypqpfwlalf vegtrftqak
      181 lvaaqeyats qglpiprnvl iprtkgfvsa vshmrsfvpa iyditvaipk sspsptmlrl
      241 fkgqssvvhv hikrhlmkel pemdeavaqw ckdlfvekdk lldkhiaedt fsdqplqdig
      301 rpakpllvvc swacivgyga lkflqqssll sswrgialsa filaivtflm qililftqse
      361 rstpakvaag kprmtgrvrq q
//
LOCUS       XP_016706725             502 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 42 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706725
VERSION     XP_016706725.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706725.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..502
                     /product="protein DETOXIFICATION 42 isoform X1"
                     /calculated_mol_wt=53529
     Region          37..492
                     /region_name="MATE_DinF_like"
                     /note="DinF and similar proteins, a subfamily of the
                     multidrug and toxic compound extrusion (MATE)-like
                     proteins; cd13136"
                     /db_xref="CDD:240541"
     CDS             1..502
                     /gene="LOC107921368"
                     /coded_by="XM_016851236.2:486..1994"
                     /db_xref="GeneID:107921368"
ORIGIN      
        1 mgvgailslw snmgklpllm ffkdsrnvlk rdelgseivn iavpatlall adpiaslidt
       61 afigrigave lasvgvsvai fnqvsritmf plvsittsfv aeeeatskps teaepdanpe
      121 tesdvnqelv pltgngnvkk sqpdgnskkh vpsassalvi gsilgilqtl flifgakpll
      181 gymgvnsesp mlniaqqylt lrslgapail lslaaqgvfr glkdtktply aiiigdsmnv
      241 ildpilmfvl rlgikgagia hvvsqylifl iliwrlagki elcppnfkel qfsrflksgf
      301 hllvkvistt scvtvaasla arqgpnsmaa fqvclqiwla tslladglav agqailassf
      361 akkdyekiva tssrvlqigv llgfllsctl aalsqfaaql ftndrdvmql mnlsfpfiav
      421 tqpintlafv fdgvnygasd faysaysmvl vavvsifclf ilssstgyig iwialtifmn
      481 lrvfagllrv gtgtgpwgfl rn
//
LOCUS       XP_040943521             471 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 42 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943521
VERSION     XP_040943521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087587.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..471
                     /product="protein DETOXIFICATION 42 isoform X2"
                     /calculated_mol_wt=50422
     Region          37..461
                     /region_name="MATE_DinF_like"
                     /note="DinF and similar proteins, a subfamily of the
                     multidrug and toxic compound extrusion (MATE)-like
                     proteins; cd13136"
                     /db_xref="CDD:240541"
     CDS             1..471
                     /gene="LOC107921368"
                     /coded_by="XM_041087587.1:586..2001"
                     /db_xref="GeneID:107921368"
ORIGIN      
        1 mgvgailslw snmgklpllm ffkdsrnvlk rdelgseivn iavpatlall adpiaslidt
       61 afigrigave lasvgvsvai fnqvsritmf plvsittsfv aeeeatskps teaepdanpe
      121 tesdvnqelv pltgngnvkk sqpdgnskkh vpsassalvi gsilgilqtl flifgakpll
      181 gymgvnsesp mlniaqqylt lrslgapail lslaaqgvfr glkdtktply aiiigdsmnv
      241 ildpilmfvl rlgikgagia hvvsqylifl iliwrlagki elcppnfkel qfsrflksgf
      301 hllvkiwlat slladglava gqailassfa kkdyekivat ssrvlqigvl lgfllsctla
      361 alsqfaaqlf tndrdvmqlm nlsfpfiavt qpintlafvf dgvnygasdf aysaysmvlv
      421 avvsifclfi lssstgyigi wialtifmnl rvfagllrvg tgtgpwgflr n
//
LOCUS       XP_016732404             253 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger AN1 and C2H2 domain-containing stress-associated
            protein 16 [Gossypium hirsutum].
ACCESSION   XP_016732404
VERSION     XP_016732404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..253
                     /product="zinc finger AN1 and C2H2 domain-containing
                     stress-associated protein 16"
                     /calculated_mol_wt=28149
     Region          13..49
                     /region_name="zf-AN1"
                     /note="AN1-like Zinc finger; pfam01428"
                     /db_xref="CDD:460208"
     Region          101..139
                     /region_name="zf-AN1"
                     /note="AN1-like Zinc finger; pfam01428"
                     /db_xref="CDD:460208"
     Region          <189..247
                     /region_name="PHA00733"
                     /note="hypothetical protein"
                     /db_xref="CDD:177301"
     CDS             1..253
                     /gene="LOC107943172"
                     /coded_by="XM_016876915.2:265..1026"
                     /db_xref="GeneID:107943172"
ORIGIN      
        1 mgtpefpdlg rhcsvqhckq idflpftcdr cdlsyclehr syikhqcska gnndvtvvic
       61 plcakgvrli pnedpniswe nhvntecdps nydkvtkkkk cpvrrckevl tfsntikckd
      121 csvdhclkhr fgldhdcpgp kkpattsssf watsllnvas sfrenrqvar dgaglrrsss
      181 gsagqmeecp qcrvkfssvt alvehvkkvh ernsqsrvlk msidvcpkcg rgfrdpvslv
      241 ehvekdhggt ska
//
LOCUS       XP_040943523            1003 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SEMI-ROLLED LEAF 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943523
VERSION     XP_040943523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087589.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1003
                     /product="protein SEMI-ROLLED LEAF 2 isoform X1"
                     /calculated_mol_wt=111751
     CDS             1..1003
                     /gene="LOC107943168"
                     /coded_by="XM_041087589.1:415..3426"
                     /db_xref="GeneID:107943168"
ORIGIN      
        1 msfisgaisr qvlpacgslc flcpglrtrs rqpvkrykkm iaeifprnqe egpnerkigk
       61 lceyasknpl ripkistsle qrcykelrne kfqsvkivmc iyrkllvsck eqmslfsssl
      121 lsiiqtlldq trhdemriig chtlfyflnn qndgtcmfkl egfipklcql aqetgesere
      181 knlcaaglqa lssmiwfmgi hshisvefdn ivsvvlenye dprknlenhn ggksqlekev
      241 vkdeghdsss pdvpitfpsw dtivndngel nvsvedaqnr sfwskvclhn manlakeatt
      301 arrvleslfr yldsenlwsl qtglafpvlk dmqllmessg qnthfllsll vkhldhksvl
      361 kqpdvqlqil evtsslarys kvepsiailg avsdvmrhlr ksihcsldda tlgvdtinwn
      421 knfkeavdnc lvqlsqkvgd agpildamav mlenisnitv iaratvsvvy rtaqvvasip
      481 npsylnkafp eslfhqllpa mvhpdhetri gahrifsvvl vptsvcpqqs svppltnkvi
      541 prtlsrtvsv fsssaalfek lrkeksfsrg ngyiekesiv negsnnmiln rlnssysras
      601 ssrnlsvple tdknslsnsn tesethslrl sstqisllls siwaqsvspq ntpqnyeaia
      661 htyslvllfs raknssneal vrsfqlaysl rrislneggp lppscrrslf tlatsmilfs
      721 skafnilpiv ystkvalrer vvdpflhlve dcklkvvdtg sdrptnvygs keddnlaakt
      781 lsqiqitpeq dseslaseiv kslgissepe lsntraqlls kflpdevcpl gsyltidqlh
      841 keyqagaees kstkeddafa epfecqtkdg sglsqetpkp ldvnqlldsv letsdqfgri
      901 svstgpdmsy kdmahhcetl ltrkqqkmsd lmsvhlrqds yfqnpfhaeq pgpvfeqtsg
      961 tnslqqpvgt lsmlcateyq nhlqpfsfps stpydnilka agc
//
LOCUS       XP_040943524             938 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SEMI-ROLLED LEAF 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943524
VERSION     XP_040943524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087590.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..938
                     /product="protein SEMI-ROLLED LEAF 2 isoform X2"
                     /calculated_mol_wt=104423
     CDS             1..938
                     /gene="LOC107943168"
                     /coded_by="XM_041087590.1:181..2997"
                     /db_xref="GeneID:107943168"
ORIGIN      
        1 mlqkilyasq stsleqrcyk elrnekfqsv kivmciyrkl lvsckeqmsl fsssllsiiq
       61 tlldqtrhde mriigchtlf yflnnqndgt cmfklegfip klcqlaqetg esereknlca
      121 aglqalssmi wfmgihshis vefdnivsvv lenyedprkn lenhnggksq lekevvkdeg
      181 hdssspdvpi tfpswdtivn dngelnvsve daqnrsfwsk vclhnmanla keattarrvl
      241 eslfryldse nlwslqtgla fpvlkdmqll messgqnthf llsllvkhld hksvlkqpdv
      301 qlqilevtss laryskveps iailgavsdv mrhlrksihc slddatlgvd tinwnknfke
      361 avdnclvqls qkvgdagpil damavmleni snitviarat vsvvyrtaqv vasipnpsyl
      421 nkafpeslfh qllpamvhpd hetrigahri fsvvlvptsv cpqqssvppl tnkviprtls
      481 rtvsvfsssa alfeklrkek sfsrgngyie kesivnegsn nmilnrlnss ysrasssrnl
      541 svpletdkns lsnsnteset hslrlsstqi slllssiwaq svspqntpqn yeaiahtysl
      601 vllfsrakns snealvrsfq layslrrisl neggplppsc rrslftlats milfsskafn
      661 ilpivystkv alrervvdpf lhlvedcklk vvdtgsdrpt nvygskeddn laaktlsqiq
      721 itpeqdsesl aseivkslgi ssepelsntr aqllskflpd evcplgsylt idqlhkeyqa
      781 gaeeskstke ddafaepfec qtkdgsglsq etpkpldvnq lldsvletsd qfgrisvstg
      841 pdmsykdmah hcetlltrkq qkmsdlmsvh lrqdsyfqnp fhaeqpgpvf eqtsgtnslq
      901 qpvgtlsmlc ateyqnhlqp fsfpsstpyd nilkaagc
//
LOCUS       XP_016732401              80 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732401
VERSION     XP_016732401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..80
                     /product="uncharacterized protein"
                     /calculated_mol_wt=8509
     Region          3..75
                     /region_name="DUF1138"
                     /note="Protein of unknown function (DUF1138); pfam06592"
                     /db_xref="CDD:429021"
     CDS             1..80
                     /gene="LOC107943169"
                     /coded_by="XM_016876912.2:142..384"
                     /db_xref="GeneID:107943169"
ORIGIN      
        1 maakyiiasl agsfaiayvs dllvsdskif ggttpstvsn kgwweetdkk fqawprtagp
       61 pvvmnpisrq nfivksgses
//
LOCUS       XP_016732402              80 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732402
VERSION     XP_016732402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016876913.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..80
                     /product="uncharacterized protein"
                     /calculated_mol_wt=8509
     Region          3..75
                     /region_name="DUF1138"
                     /note="Protein of unknown function (DUF1138); pfam06592"
                     /db_xref="CDD:429021"
     CDS             1..80
                     /gene="LOC107943169"
                     /coded_by="XM_016876913.2:189..431"
                     /db_xref="GeneID:107943169"
ORIGIN      
        1 maakyiiasl agsfaiayvs dllvsdskif ggttpstvsn kgwweetdkk fqawprtagp
       61 pvvmnpisrq nfivksgses
//
LOCUS       XP_016733333             979 aa            linear   PLN 06-AUG-2024
DEFINITION  villin-3 [Gossypium hirsutum].
ACCESSION   XP_016733333
VERSION     XP_016733333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877844.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..979
                     /product="villin-3"
                     /calculated_mol_wt=106529
     Region          12..124
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(29..30,69,75..76,78..80,82..84,86..87,98,100)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          140..232
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          254..343
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(338,343)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     Region          386..487
                     /region_name="gelsolin_S4_like"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11293"
                     /db_xref="CDD:200449"
     Site            order(402..403,442,448..449,451..453,455..457,459..460,
                     471,473)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200449"
     Site            478
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200449"
     Region          519..609
                     /region_name="gelsolin_S5_like"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11288"
                     /db_xref="CDD:200444"
     Site            526
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200444"
     Region          622..720
                     /region_name="gelsolin_S6_like"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11291"
                     /db_xref="CDD:200447"
     Region          944..>965
                     /region_name="VHP"
                     /note="Villin headpiece domain; cl02491"
                     /db_xref="CDD:470591"
     CDS             1..979
                     /gene="LOC107944032"
                     /coded_by="XM_016877844.2:591..3530"
                     /db_xref="GeneID:107944032"
ORIGIN      
        1 msspakvldp afqgvgqkpg teiwrienfq pvplpksdyg kfymgdsyiv lqttpskggs
       61 ylydihfwig kdttqdeagt aaiktielda vlggravqhr elqghesdkf lsyfkpciip
      121 leggiatgfk kpeeeefekr lyvcrgkrvv rlkqvpfars slnhddvfil dtqnkiyqfn
      181 gansniqera kaleviqflk ekyhdgtcdv aivddgkldt esdsgefwvl fggfapigkk
      241 ihneddlipe typaklysit dgevkivege lskgllennk cylldcgaev fvwvgrvtqv
      301 edrkaasqaa edfvgsqqrp katritrviq gyetnsfkan fdswpagsta pggeegrgkv
      361 aallkqqgvg ikgmtksapv ieevpplleg sgkmevwcin gsaktplqke dvgkfysgdc
      421 yivlytyhsg erkedyflcc wigkdsieed qkmaarlant mcnslkgrpi qgrvfegkep
      481 pqfialfqpm vvlkgglstg ykksiadkgl tdetytaesv aliqisgtav hnnktlqvda
      541 vatslnstdc fllqsgssif twhgnqstye qqqlaakvae flkpgvvlky akegtesnaf
      601 wsalggkqsy tskkastetv rdphlftfsf nkgkfeveev ynfsqddllt edilvldtha
      661 evfvwvgqsv dtkekqnvfe igqkyiglaa sldglspnvp lykvsegnep cffttffswd
      721 stratvqgns fqkkvallfg ashavevksn gnqggptqra salaalssaf npsskstpla
      781 qarsngnngg ptqrasalaa lssafnplsa sktsapkpss sgqgsqraaa vaalssvlta
      841 ekkkqphdgs pikstsstpa vssplseaqs eadpseaeds qlvaeakeag vasqtngdds
      901 epkqkilqde ngsgstqsay syeqlkaitg naatgidlkr reaylsdnef qtvfgmekea
      961 fyklpkwkqd lkkkkvglf
//
LOCUS       XP_016707637             312 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYBC1 [Gossypium hirsutum].
ACCESSION   XP_016707637
VERSION     XP_016707637.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852148.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..312
                     /product="transcription factor MYBC1"
                     /calculated_mol_wt=33648
     Region          99..152
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..312
                     /gene="LOC121203048"
                     /coded_by="XM_016852148.2:257..1195"
                     /db_xref="GeneID:121203048"
ORIGIN      
        1 mreedsnwfs rweeelpspd elmplsqsli tpdlamafdi rnpnhhhaqq qqssvqpapp
       61 ppsaavqpss qptlaefaad sgdlgsgaag departlkrp rlvwtpqlhk rfvdavahlg
      121 iknavpktim qlmsvdgltr envashlqky rlylkrmqgl sggsgggang gsggaglgas
      181 adpatdhlfa sspvpphflh pgrgnsehfl pfvpvpalqh hhhhqqqqiv aaavghphlq
      241 sqyhrpqmgh ygsspnsqfe hpflgrqtqq pmhriggtpm hnqapssyve dlesangngg
      301 rkvltlfptg dd
//
LOCUS       XP_040943525             312 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYBC1 [Gossypium hirsutum].
ACCESSION   XP_040943525
VERSION     XP_040943525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087591.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..312
                     /product="transcription factor MYBC1"
                     /calculated_mol_wt=33648
     Region          99..152
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..312
                     /gene="LOC121203048"
                     /coded_by="XM_041087591.1:268..1206"
                     /db_xref="GeneID:121203048"
ORIGIN      
        1 mreedsnwfs rweeelpspd elmplsqsli tpdlamafdi rnpnhhhaqq qqssvqpapp
       61 ppsaavqpss qptlaefaad sgdlgsgaag departlkrp rlvwtpqlhk rfvdavahlg
      121 iknavpktim qlmsvdgltr envashlqky rlylkrmqgl sggsgggang gsggaglgas
      181 adpatdhlfa sspvpphflh pgrgnsehfl pfvpvpalqh hhhhqqqqiv aaavghphlq
      241 sqyhrpqmgh ygsspnsqfe hpflgrqtqq pmhriggtpm hnqapssyve dlesangngg
      301 rkvltlfptg dd
//
LOCUS       XP_016707636             312 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYBC1 [Gossypium hirsutum].
ACCESSION   XP_016707636
VERSION     XP_016707636.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852147.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..312
                     /product="transcription factor MYBC1"
                     /calculated_mol_wt=33648
     Region          99..152
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..312
                     /gene="LOC121203048"
                     /coded_by="XM_016852147.2:257..1195"
                     /db_xref="GeneID:121203048"
ORIGIN      
        1 mreedsnwfs rweeelpspd elmplsqsli tpdlamafdi rnpnhhhaqq qqssvqpapp
       61 ppsaavqpss qptlaefaad sgdlgsgaag departlkrp rlvwtpqlhk rfvdavahlg
      121 iknavpktim qlmsvdgltr envashlqky rlylkrmqgl sggsgggang gsggaglgas
      181 adpatdhlfa sspvpphflh pgrgnsehfl pfvpvpalqh hhhhqqqqiv aaavghphlq
      241 sqyhrpqmgh ygsspnsqfe hpflgrqtqq pmhriggtpm hnqapssyve dlesangngg
      301 rkvltlfptg dd
//
LOCUS       XP_016706238             508 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 98A2 [Gossypium hirsutum].
ACCESSION   XP_016706238
VERSION     XP_016706238.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850749.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706238.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..508
                     /product="cytochrome P450 98A2"
                     /calculated_mol_wt=57987
     Region          58..490
                     /region_name="CYP98"
                     /note="cytochrome P450 family 98; cd20656"
                     /db_xref="CDD:410749"
     Site            order(94,119,123,131,182,296,299..300,303..304,363,
                     367..368,370,430..433,436..440,443..444)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410749"
     Site            order(212,216,239,295,298..299,368)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410749"
     CDS             1..508
                     /gene="LOC107920919"
                     /coded_by="XM_016850749.2:29..1555"
                     /db_xref="GeneID:107920919"
ORIGIN      
        1 mspfilaist iaiilaykly qrlrfklppg prrwpvvgnl ydikpvrfrc yaewaraygp
       61 iisvwfgstl nvivsntela revlkecdqq ladrhrtrsa akfsrdgkdl iwadygphyv
      121 kvrkvctlel fspkrlealr piredevtam vesiflhcsn penqgrslvv rkylgavafn
      181 nitrlafgkr fvnhedimde qghefkaiva nglklgasla maehipwlrw mfpleeeafa
      241 khgarrdrlt raimeehtva rqksgntkqh fvdalltlqd kydlsedtii gllwdmitag
      301 mdttaisvew amaelirnpr vqqkaqeeld rvigservms etdfsnlpyl lsvakealrl
      361 hpptplmlph rananvkigg ydipkgsnvh vnvwtiaydp vvwkdpesfr perfleedvd
      421 mkghdfrllp fgagrrvcpg aqlginlvts mlghllhhfc wtppeamkve eidmlenpgl
      481 vaymrtplqa matprlpyhl ykriavdm
//
LOCUS       XP_040943526             256 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943526
VERSION     XP_040943526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087592.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29028
     Region          79..136
                     /region_name="DUF309"
                     /note="Domain of unknown function (DUF309); pfam03745"
                     /db_xref="CDD:427482"
     CDS             1..256
                     /gene="LOC121214009"
                     /coded_by="XM_041087592.1:127..897"
                     /db_xref="GeneID:121214009"
ORIGIN      
        1 mvlafkpplt yfspfssphl pprstpswpl hhsnstynpn tclsplpiya hskwptnths
       61 faiwyrysss eeeddnhsfd eavslfnqre yykchdllea lwnkaedptr tlihgilqca
      121 vgfhhlfnqn hkgammelge glcklrkmdf dsgpfydfeq disavlnfiy ntqielaacg
      181 ddlcvtmeqs eksylllgay aagqhlyhle mdsdqvvyiv fcpqrpngst ahtsapsprv
      241 rlpilkaaed hllvce
//
LOCUS       XP_016708066             371 aa            linear   PLN 06-AUG-2024
DEFINITION  5-formyltetrahydrofolate cyclo-ligase-like protein COG0212
            [Gossypium hirsutum].
ACCESSION   XP_016708066
VERSION     XP_016708066.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852577.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016708066.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="5-formyltetrahydrofolate cyclo-ligase-like
                     protein COG0212"
                     /calculated_mol_wt=41697
     Region          107..305
                     /region_name="5-FTHF_cyc-lig"
                     /note="5-formyltetrahydrofolate cyclo-ligase family;
                     pfam01812"
                     /db_xref="CDD:396398"
     CDS             1..371
                     /gene="LOC107922504"
                     /coded_by="XM_016852577.2:91..1206"
                     /db_xref="GeneID:107922504"
ORIGIN      
        1 mhspellhyy pkfhsmdsym irlsspftyn hkcylfanqk lsrhftsfnf rlqsrknsts
       61 dakefdesaf eaerlrldak aresmaqisk tmtettaeae adpkawkwvi rkriwdlmea
      121 qniaqnprpv hhripnfvga ssaakklsel aafvmancvk vnpdspqkqv rfltlsdgkk
      181 lltpqprlrt gffsilessm ltpstineac tsvgvakygr pigldekikv dvivigsvav
      241 dpktgarlgk gegfaeleyg mlrymgaidd stpvvtsvhd cqivddipve kllvhdvpvd
      301 iictptqvif tnrtipkpqg iywnklspek lgqirilrel ksrieqetgq klpcgpsekl
      361 pptaqrrrgh s
//
LOCUS       XP_040943527             309 aa            linear   PLN 06-AUG-2024
DEFINITION  dihydrofolate reductase [Gossypium hirsutum].
ACCESSION   XP_040943527
VERSION     XP_040943527.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087593.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..309
                     /product="dihydrofolate reductase"
                     /calculated_mol_wt=34927
     Region          5..198
                     /region_name="FSH1"
                     /note="Serine hydrolase (FSH1); pfam03959"
                     /db_xref="CDD:461110"
     CDS             1..309
                     /gene="LOC121214010"
                     /coded_by="XM_041087593.1:189..1118"
                     /db_xref="GeneID:121214010"
ORIGIN      
        1 megqnqnmki lclhgfrtsg kflqkqiskw dpslflhhfq mdfpdglfsa ggksdiegif
       61 pppyfewfqf nkefteytnl eecishlcqy ithngpfhgl lgfsqgatlg alllgykaqg
      121 kvlkehppfk mfvsisgskf repsicevay kdkidvksvh figakdwlkl psedlatafh
      181 dpliirhpqg htvprldevs ieqlrkwian ilfdnndgis kgeehdeqet lkvdtpkelq
      241 nniiddgnnn qinaleiatt eeeipkemqn kiiisnnqin asefagnklk eviqdksint
      301 qidasqdal
//
LOCUS       XP_016707382             478 aa            linear   PLN 06-AUG-2024
DEFINITION  serine decarboxylase [Gossypium hirsutum].
ACCESSION   XP_016707382
VERSION     XP_016707382.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851893.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707382.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="serine decarboxylase"
                     /calculated_mol_wt=53481
     Region          14..478
                     /region_name="PLN02263"
                     /note="serine decarboxylase"
                     /db_xref="CDD:177904"
     Site            order(170..171,174,244,278,281,307,310)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99743"
     Site            310
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
     CDS             1..478
                     /gene="LOC107922063"
                     /coded_by="XM_016851893.2:447..1883"
                     /db_xref="GeneID:107922063"
ORIGIN      
        1 maggaetkap spnvngkaei lkgnfeptai kvepltpvvp engvekpsek srnivlgrnv
       61 hstcltitep evndevtgdk eaqmagvlar yrknlmertk yhlgypynld fdygalaqlq
      121 hfsinnlgdp fiesnygvhs rqfevgvldw farlweiekd eywgyitncg tegnlhgilv
      181 grevfpdgil yasreshysv fkaarmyrme cvkvdtlvsg eidcsdlrpk llankdkpai
      241 lnvnigttvk gavddldvvi qtleecgfsh drfyihcdga lfglmmpfvk rapkvsfkkp
      301 igsvsvsghk fvgcpmpcgv qitrmehinv lssnveylas rdatimgsrn ghaplflwyt
      361 lnrkgykgfq kdvqkclrna hylkdrlhea gisamlnels stvvferprd eefvrrwqla
      421 cegniahvvv mpnvtiekld fflnelvekr stwyqgnvqp pciaaeigka ncvcalhk
//
LOCUS       XP_040943528             442 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943528
VERSION     XP_040943528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087594.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..442
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50593
     Region          115..205
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..442
                     /gene="LOC107922344"
                     /coded_by="XM_041087594.1:518..1846"
                     /db_xref="GeneID:107922344"
ORIGIN      
        1 megnlsrgii pggssfggld lqgsmmvhhr aqnphnmhhh hhhpnprrgt sahpgiplta
       61 gtmqnsdqpv tmidynkmei gkcsvsdede psfaeegvdg hndgnkgkkg spwqrvkwtd
      121 kmvrllitav syigedmagd cgggirrqfa vlqtkgkwks vskviaergy hvspqqcedk
      181 fndlnkrykk lydmlgrgis cqvvenpall dvidylteke kddvrkilss khlfyeemcs
      241 yhngnrlhlp hdlklqrslq lalrrrdene nddvrrhqrd dlddddhdme tddhdeleen
      301 hashgdnrai fgapggstkr srqsqvheda cfqkflnsqd cnkssfsspp vaqadtnqvl
      361 pdysraawlq kqwtesrslq leeqklqiqv dmlelekqrf kwqrfskksd celekirmgn
      421 ermklenerm alelkrkela ad
//
LOCUS       XP_040943529             475 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor DF1 [Gossypium hirsutum].
ACCESSION   XP_040943529
VERSION     XP_040943529.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087595.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..475
                     /product="trihelix transcription factor DF1"
                     /calculated_mol_wt=53748
     Region          58..123
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     Region          315..380
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     CDS             1..475
                     /gene="LOC121214011"
                     /coded_by="XM_041087595.1:158..1585"
                     /db_xref="GeneID:121214011"
ORIGIN      
        1 mlggggttas vssgggcngi neaaapvavf dtndgnsnns geddrskvde rdrsfggnrw
       61 prqetlallk irsdmdvtfr easvkgplwe evsrklaelg yhrsakkcke kfenvykyhk
      121 rtkdgrsgka dgktyrfcdq leafqnqpsi hwpppppmaa aatinqsisa vqmsnstsss
      181 tssdlelqgr kkrkrkwkdf ferlmkeviq kqqvmqktfl eaiekherer ivrdeawkvq
      241 emsrlnrere ilaqersiaa akdaaimafl qklsekqnlg qsqnsplppp avapaavapp
      301 pdngnqiqth tpsssrwpkv eiealikirt sldskyqdns pkgplweeis ngmkklgynr
      361 nakrckekwe ninkyfkkvk esnkqrpvds ktcpyfhqld vlyreknkhd cssksnplmv
      421 rpekqwpppl ephqqhhdti medmmesdqn ddeeedeggs yelvaskpvs mgtae
//
LOCUS       XP_040943530             268 aa            linear   PLN 06-AUG-2024
DEFINITION  ribosome-recycling factor [Gossypium hirsutum].
ACCESSION   XP_040943530
VERSION     XP_040943530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087596.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..268
                     /product="ribosome-recycling factor"
                     /calculated_mol_wt=29243
     Region          109..265
                     /region_name="RRF"
                     /note="Ribosome recycling factor; pfam01765"
                     /db_xref="CDD:460316"
     Site            order(114..117,187..190)
                     /site_type="other"
                     /note="hinge region"
                     /db_xref="CDD:238288"
     CDS             1..268
                     /gene="LOC121214013"
                     /coded_by="XM_041087596.1:115..921"
                     /db_xref="GeneID:121214013"
ORIGIN      
        1 malylvraik ltntirtttl llrssntqtr nishflvshn qltprsqnlt pfcsfdflrd
       61 srrgfakgkk skddsggstm elapdigpsv kasaasqmda aivalsrela klrtgrasag
      121 mldhiivetd gvkmqlnhla vvsvidsktl svnpydpntl kalesaiiss plglnpkvdg
      181 qrliapippl tkehmqamck vvakssedvk qsirrarqka ldtikkagss fpkdeakrfe
      241 keideltkkf vksadelcka kekeitqg
//
LOCUS       XP_040943531             164 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L21-1 [Gossypium hirsutum].
ACCESSION   XP_040943531
VERSION     XP_040943531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087597.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="60S ribosomal protein L21-1"
                     /calculated_mol_wt=18518
     Region          1..158
                     /region_name="PLN00190"
                     /note="60S ribosomal protein L21; Provisional"
                     /db_xref="CDD:177784"
     CDS             1..164
                     /gene="LOC121214014"
                     /coded_by="XM_041087597.1:272..766"
                     /db_xref="GeneID:121214014"
ORIGIN      
        1 mpaghglrsr trdlfarpfr kkgyiplsty lrtykigdyv dvkvngavhk gmphkfyhgr
       61 tgrvwnvtkr aigvevnkqv gnriirkrih vrvehvqpsr caeefklrkv kndqlkaeak
      121 akgevistkr qpegprpgfm vdgatletvt pipydvvndl kggy
//
LOCUS       XP_016707570             619 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 37 [Gossypium hirsutum].
ACCESSION   XP_016707570
VERSION     XP_016707570.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852081.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707570.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..619
                     /product="DEAD-box ATP-dependent RNA helicase 37"
                     /calculated_mol_wt=67753
     Region          161..546
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..619
                     /gene="LOC107922187"
                     /coded_by="XM_016852081.2:397..2256"
                     /db_xref="GeneID:107922187"
ORIGIN      
        1 mttswadsva nsasetvvsd nnslrrptrs tyvpphlrnr pssdthnlsg pvtertsfng
       61 ttgvsqwsrp siggggggtk peigrqgqvy gssgrggggw nnrsggwnrr erevnpfddn
      121 deadvkdqac geqensginf dayedipvei sgenvpppvn tfvdidlgel lnqnirrcky
      181 vkptpvqrha ipivlggrdl macaqtgsgk taafcfpiis gimreqyvqr prvartvypl
      241 alilsptrel scqihdeakk fsyqtgvkvv vayggapitq qlrelergvd ilvatpgrlv
      301 dllerarvsl qmirylalde adrmldmgfe pqirkiveqm dmpnrgvrqt mlfsatfpre
      361 iqrlasdfla nyiflavgrv gsstdlivqr vefvqesdkr shlmdllhaq rengahgkqa
      421 ltlvfvetkk gadslehwlc mngfpattih gdrtqqerel alrsfksgkt pilvatdvaa
      481 rgldiphvah vvnfdlpndi ddyvhrigrt gragktglat affnegnlsm arplaelmqe
      541 anqevpawlt ryasrapygg nknrrygggg grfggrdfrr egsvgrnldh ygggnsgtay
      601 gvpgnygggy apgmtsawd
//
LOCUS       XP_040943532             619 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 37 [Gossypium hirsutum].
ACCESSION   XP_040943532
VERSION     XP_040943532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087598.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..619
                     /product="DEAD-box ATP-dependent RNA helicase 37"
                     /calculated_mol_wt=67753
     Region          161..546
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..619
                     /gene="LOC107922187"
                     /coded_by="XM_041087598.1:543..2402"
                     /db_xref="GeneID:107922187"
ORIGIN      
        1 mttswadsva nsasetvvsd nnslrrptrs tyvpphlrnr pssdthnlsg pvtertsfng
       61 ttgvsqwsrp siggggggtk peigrqgqvy gssgrggggw nnrsggwnrr erevnpfddn
      121 deadvkdqac geqensginf dayedipvei sgenvpppvn tfvdidlgel lnqnirrcky
      181 vkptpvqrha ipivlggrdl macaqtgsgk taafcfpiis gimreqyvqr prvartvypl
      241 alilsptrel scqihdeakk fsyqtgvkvv vayggapitq qlrelergvd ilvatpgrlv
      301 dllerarvsl qmirylalde adrmldmgfe pqirkiveqm dmpnrgvrqt mlfsatfpre
      361 iqrlasdfla nyiflavgrv gsstdlivqr vefvqesdkr shlmdllhaq rengahgkqa
      421 ltlvfvetkk gadslehwlc mngfpattih gdrtqqerel alrsfksgkt pilvatdvaa
      481 rgldiphvah vvnfdlpndi ddyvhrigrt gragktglat affnegnlsm arplaelmqe
      541 anqevpawlt ryasrapygg nknrrygggg grfggrdfrr egsvgrnldh ygggnsgtay
      601 gvpgnygggy apgmtsawd
//
LOCUS       XP_040943533             310 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP2A-4 catalytic subunit
            [Gossypium hirsutum].
ACCESSION   XP_040943533
VERSION     XP_040943533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087599.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="serine/threonine-protein phosphatase PP2A-4
                     catalytic subunit"
                     /calculated_mol_wt=35244
     Region          10..294
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(52,68,71..72,74..75,77,79..80,92,107..111,122..123,
                     126..127,131..132,135..136,144,269,278,288,294)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(58,60,86,90,118..119,123..124,128,168,190..192,201,
                     214..216,242,244,268..270)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(58,60,86,118,168,242)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..310
                     /gene="LOC121214016"
                     /coded_by="XM_041087599.1:245..1177"
                     /db_xref="GeneID:121214016"
ORIGIN      
        1 mgaptdsald ldeqisqlmq ckplseqqvr alcdkakeil meesnvqpvk apvticgdih
       61 gqfhdlqelf riggkcpdtn ylfmgdyvdr gyysvetvtl lvalkvrypq ritilrgnhe
      121 srqitqvygf ydeclrkygs anvwkiftdl fdyfpltalv eseifclhgg lspsietldn
      181 vrnfdrvqev phegpmcdll wsdpddrcgw gisprgagyt fgqdiseqfn htnslkliar
      241 ahqlvmdgfn waheqkvvti fsapnycyrc gnmasilevd dcknqsfiqf epaprrgepd
      301 vtrrtpdyfl
//
LOCUS       XP_040943535             146 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943535
VERSION     XP_040943535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087601.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15959
     Region          27..99
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..146
                     /gene="LOC121214017"
                     /coded_by="XM_041087601.1:37..477"
                     /db_xref="GeneID:121214017"
ORIGIN      
        1 mgvviidgst vknfvtdeeh fnksmdesfa aldlnedgvl crselrkafe slrlieshfg
       61 vdvattpeel nqlydsifdk fdldgsntid pqefksemkk illaiadglg scpiqmaled
      121 ddrsnflkka adleaaklva nhgdgs
//
LOCUS       XP_040943536             229 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S5 [Gossypium hirsutum].
ACCESSION   XP_040943536
VERSION     XP_040943536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087602.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="40S ribosomal protein S5"
                     /calculated_mol_wt=25154
     Region          44..228
                     /region_name="uS7_Eukaryote"
                     /note="Eukaryota homolog of Ribosomal Protein S7; cd14867"
                     /db_xref="CDD:271246"
     Site            order(44,73..75,77..80,113,117)
                     /site_type="other"
                     /note="S9 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     Site            order(77,79,83..86,89,97,100,102..106,110..114,117,
                     157..159,161,171,178,185,188,194..195)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:271246"
     Site            order(121,124..125,128,194,196..197)
                     /site_type="other"
                     /note="S25 interface [polypeptide binding]"
                     /db_xref="CDD:271246"
     CDS             1..229
                     /gene="LOC121214019"
                     /coded_by="XM_041087602.1:241..930"
                     /db_xref="GeneID:121214019"
ORIGIN      
        1 msmvlkdtkl evtlpkamti tgvvvnstkn enekaqtqpy tevklfnwsf qdleigdisl
       61 sdyigvhask hatyvphtpg rylvkrfrka qcpivkrlah slmmhgrnng kkliavriik
      121 hameivyllt dqnpiqviad aivnsgpred atsigsagvv rrqavdispl rpvneaiyli
      181 ttgaresafr niksiagcla delikaakgs snsynikkde iervakans
//
LOCUS       XP_040943537            1114 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin C-terminal hydrolase 12 [Gossypium hirsutum].
ACCESSION   XP_040943537
VERSION     XP_040943537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087603.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1114
                     /product="ubiquitin C-terminal hydrolase 12"
                     /calculated_mol_wt=130932
     Region          45..1076
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(200,205,452,470)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1114
                     /gene="LOC121214020"
                     /coded_by="XM_041087603.1:207..3551"
                     /db_xref="GeneID:121214020"
ORIGIN      
        1 mtlmttppvd qedeemlvph tdivegpqpm evsqvepant nenqqveepq imkftwtien
       61 fsrlntkkhy sdifvvggyk wrilifpkgn nvdhlsmyld vadssalpyg wsryaqfsla
      121 vvnqvhhkys irkdtqhqfn aresdwgftp fmplsdlydp skgyivndtv vveaevvvrk
      181 ildywsydsk ketgfvglkn qgatcymnsl lqtlyhipyf rkavyhmptt endmpigsip
      241 lalqslfykl qyndtsvatk eltksfgwdt ydsfmqhdvq elnrvlcekl edkmkgtvve
      301 gtiqklfegh hmnyiecinv dykstrkesf ydlqldvkgc rdvyasfdky veverlegdn
      361 kyhaeehglq dakkgvlfie fppvlqlqlk rfeydfmrdt mvkindryef plqldldred
      421 rkylspdadt svrnlytlhs vlvhsggvhg ghyyafirpt lsdqwykfdd ervtkedmkr
      481 aleeqyggee elpqtnpgfn ntpfkftkys naymlvyire sdkdkiicnv dekdiaehlk
      541 irlkkeqeee ddkrrykaqa hlytiikvar dedlleqigk diyfdlvdhd kvrsfriqkq
      601 tpfndfkeel akefgipvqy qrywiwakrq nhtyrpnrpl tpqeeaqpvg qlrdmsnkah
      661 naelklflev gcgpdlrpip ppdktredim lffklydpek gelryvgrll vklsgkpiey
      721 iaklnqmagf apdeeielye eikfepcvmc ehldkrcsfr lsqiedgdii sfqkslpias
      781 eeacqypdvp sfleyvhnrq ivhfrslerp keddfclels kihtyddvve rvahkigldd
      841 pskirltshn cysqqpkpqp ikyrgvetls emlvhynqts dilyyevldi plpelqglkn
      901 lkvafhhatk devvihnirl pkqstigdvi delktkvels hpnaelrlle vfyhkiykif
      961 ppsekienin dqywtlraee vpeeeknlgl nnrlihvyhf sketaqnqmq vqnfgepffl
     1021 vihegetlae vklriqkklq vsdeefskwk fafmslgqpe ylqdsdivfk rfqrrdvyga
     1081 weqylglehs dtsprrtyvn qnrntfekpv kiyn
//
LOCUS       XP_040943539             426 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid transporter ANT1 [Gossypium hirsutum].
ACCESSION   XP_040943539
VERSION     XP_040943539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087605.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..426
                     /product="amino acid transporter ANT1"
                     /calculated_mol_wt=45727
     Region          22..424
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..426
                     /gene="LOC121214023"
                     /coded_by="XM_041087605.1:403..1683"
                     /db_xref="GeneID:121214023"
ORIGIN      
        1 meknseripl inpspssstt egraskfqti gniivsivgt gvlglpfafr vagwlagslg
       61 vilagfatfy cmlllvqcrd ksasenklqg titygdlgyi cigkpgrylt eflifisqcg
      121 gsvaylvfig qnlvsvfkgq tfsvasyifl lvpieialsw igslsafspf sifadicnvl
      181 amgfvvkeei eraigggfsf rdrkaiadnl gglpfaggma vfcfegfgmt laleqsmker
      241 ntfpkvlgma ftwitlmyvl fgsfgylayg detkdiitln lpnnwtatav qiglclglvf
      301 tfpimvhpvn eilegklkki mwfqklnnnd aensitglgk lgtytsravl iiglavlasy
      361 vpgfgifasl vgstvcalis fvlpasfhlt llgsslslwq kaldccillc glifaaygty
      421 ntivgi
//
LOCUS       XP_040943540             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943540
VERSION     XP_040943540.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087606.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25828
     Region          172..226
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cd09487"
                     /db_xref="CDD:188886"
     CDS             1..235
                     /gene="LOC121202965"
                     /coded_by="XM_041087606.1:269..976"
                     /db_xref="GeneID:121202965"
ORIGIN      
        1 mvkskqrqlg lkhsnkknar ggrlgtsypn feldllgedg wvvvkkqrvt ilipplpssk
       61 kskmanqgpg qlqgpkkedv qkspkstpla hkmgmeiarq qistsptfpa lgpgveepkk
      121 pggvvalksh nkivkivrsm hcpnaafsgs mllnrrlrvs nlerklqqag gltrwlkslg
      181 ldqfvrifqa ksinkfqlvn lnmqklkdmg adavgprrkl ihaidcvcqp lcfka
//
LOCUS       XP_040943541             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943541
VERSION     XP_040943541.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087607.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25828
     Region          172..226
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cd09487"
                     /db_xref="CDD:188886"
     CDS             1..235
                     /gene="LOC121202965"
                     /coded_by="XM_041087607.1:238..945"
                     /db_xref="GeneID:121202965"
ORIGIN      
        1 mvkskqrqlg lkhsnkknar ggrlgtsypn feldllgedg wvvvkkqrvt ilipplpssk
       61 kskmanqgpg qlqgpkkedv qkspkstpla hkmgmeiarq qistsptfpa lgpgveepkk
      121 pggvvalksh nkivkivrsm hcpnaafsgs mllnrrlrvs nlerklqqag gltrwlkslg
      181 ldqfvrifqa ksinkfqlvn lnmqklkdmg adavgprrkl ihaidcvcqp lcfka
//
LOCUS       XP_016711890             621 aa            linear   PLN 06-AUG-2024
DEFINITION  protein downstream neighbor of Son [Gossypium hirsutum].
ACCESSION   XP_016711890
VERSION     XP_016711890.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016856401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016711890.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..621
                     /product="protein downstream neighbor of Son"
                     /calculated_mol_wt=67892
     CDS             1..621
                     /gene="LOC107925687"
                     /coded_by="XM_016856401.2:286..2151"
                     /db_xref="GeneID:107925687"
ORIGIN      
        1 makvaahsal tstsqqiggd alrigtsvkr ktpselrgeq lkrtnvaehv skslapseme
       61 nglkkadpqr npkyvdirmd evfpakkprf klpsgkenak enspieqtss lkkisafskl
      121 aakrrqqlsc pegsvasvdv pkddvphrtl ekcnqgtfls vtelstggqk lsglaavdmd
      181 kalkglaace aipnippess erfddissgn fcsdfhvtgq kipldftlkt yaqlvssspv
      241 nwlhrsmmcg tyngmpqfts hsgyskgksi csasqtrlas qvlnsnalhs wiypqstipp
      301 slisvlmsva adgvemdflr krlgaweesf rslyymfren accifyvcts hfvvmfaaad
      361 gsgrsrsyha yisqstrglr sslkeqdvsf smplchsyve hvttedllel seiekhnlgq
      421 trrmnsfsdv dntpqsllaf sgkenvhgly eillnyrsfl tflntadvpl lyspvpfqha
      481 alsvpevrcm eikrpdrgaa lphgsilkds csmpnssagl cysieikdsy ippwiisnmc
      541 aqmvskgqsf easfttehts vglnigvgav ceigdsseat qetigyafdi pgvmvsphln
      601 sglvkglkyc ndayivsltp l
//
LOCUS       XP_016711891             621 aa            linear   PLN 06-AUG-2024
DEFINITION  protein downstream neighbor of Son [Gossypium hirsutum].
ACCESSION   XP_016711891
VERSION     XP_016711891.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016856402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016711891.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..621
                     /product="protein downstream neighbor of Son"
                     /calculated_mol_wt=67892
     CDS             1..621
                     /gene="LOC107925687"
                     /coded_by="XM_016856402.2:331..2196"
                     /db_xref="GeneID:107925687"
ORIGIN      
        1 makvaahsal tstsqqiggd alrigtsvkr ktpselrgeq lkrtnvaehv skslapseme
       61 nglkkadpqr npkyvdirmd evfpakkprf klpsgkenak enspieqtss lkkisafskl
      121 aakrrqqlsc pegsvasvdv pkddvphrtl ekcnqgtfls vtelstggqk lsglaavdmd
      181 kalkglaace aipnippess erfddissgn fcsdfhvtgq kipldftlkt yaqlvssspv
      241 nwlhrsmmcg tyngmpqfts hsgyskgksi csasqtrlas qvlnsnalhs wiypqstipp
      301 slisvlmsva adgvemdflr krlgaweesf rslyymfren accifyvcts hfvvmfaaad
      361 gsgrsrsyha yisqstrglr sslkeqdvsf smplchsyve hvttedllel seiekhnlgq
      421 trrmnsfsdv dntpqsllaf sgkenvhgly eillnyrsfl tflntadvpl lyspvpfqha
      481 alsvpevrcm eikrpdrgaa lphgsilkds csmpnssagl cysieikdsy ippwiisnmc
      541 aqmvskgqsf easfttehts vglnigvgav ceigdsseat qetigyafdi pgvmvsphln
      601 sglvkglkyc ndayivsltp l
//
LOCUS       XP_040943542             521 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 7 [Gossypium hirsutum].
ACCESSION   XP_040943542
VERSION     XP_040943542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087608.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..521
                     /product="myosin-binding protein 7"
                     /calculated_mol_wt=59272
     Region          70..160
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..521
                     /gene="LOC121214024"
                     /coded_by="XM_041087608.1:722..2287"
                     /db_xref="GeneID:121214024"
ORIGIN      
        1 meseifsppr gllkccncsc ttcaligaps ktwfrsvkrk ydefetgnrf yvpgvdifsn
       61 arvqieneca alretvssqq gtiqdlftdl eeersassta ateamsmilk lqsekaeiem
      121 earqfkrfae ekiahdqqei miledllykr eqtiqaltcq aqaykhrmms ygfteseveg
      181 ekdeqvwhps vaedfdaeae vdlpaydypp lkcnlnenpg ndvedvedve dvekyafget
      241 prarehlrnl eerisqmeri pssnqldget pgtrnvfekv vvghsprrpr hsrkfsmdst
      301 nsfisremgs efisdsprfn fgsprfntsf kkmelvsemd eisstrrmdn asevgddmsd
      361 rvytidsvhn gvpysgtadh ksgfgisdny astpreafnl pdvcdpdikk lymrlqnlea
      421 dresmrqall smrtdkaqlv llkeiaqhlc kempperqat vgkpsmlggl fkwvassvsw
      481 srrarrskyl yglspnnvgl lmlldkgprl rqwrclsstq v
//
LOCUS       XP_040943543             115 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943543
VERSION     XP_040943543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087609.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12612
     Region          19..46
                     /region_name="VQ"
                     /note="VQ motif; pfam05678"
                     /db_xref="CDD:461711"
     CDS             1..115
                     /gene="LOC107925624"
                     /coded_by="XM_041087609.1:293..640"
                     /db_xref="GeneID:107925624"
ORIGIN      
        1 mslikhsirg rselqgprps plkiihvrpe efmslvqrlt gkdsssrdes cnrlpsssss
       61 swnmaaaepa kvtkrtsagd nlfdaemskl afngvehgdq ilelsptwlr ylacv
//
LOCUS       XP_016714902             750 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 22 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714902
VERSION     XP_016714902.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859413.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714902.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..750
                     /product="ABC transporter G family member 22 isoform X1"
                     /calculated_mol_wt=83051
     Region          110..745
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..750
                     /gene="LOC107928227"
                     /coded_by="XM_016859413.2:151..2403"
                     /db_xref="GeneID:107928227"
ORIGIN      
        1 mekgshssst tlartksdql vetlaaafks prqsdqqtpp gtsesggtls rksskrvmmg
       61 asprrssgen nntyirksrs aqmkldleel ssgaalsras saslglsfsf tgftvppdei
      121 adskpfsddd ipedveartc kmkfqteptl piylkftdvt ykviikgmts ceerdilngi
      181 tgavnpgevl almgpsgsgk ttllnllggr liqstvsgsi tyndqpyskf lksrigfvtq
      241 ddvlfphltv ketltyaarl rlpkvltrqq kekravdviy elglercqdt miggsfvrgv
      301 sggerkrvci gneiiinpsl lfldeptsgl dsttalrtiq tlqdiaevgk tvittihqps
      361 srlfhkfdkl illgkgslly fgkaseaivy fssigcspli amnpaeflld langnltdis
      421 vpseledkvq mensetetgn gkpppavvhe ylveayesrv adtekkklma plpldeelks
      481 kvssskrqwg aswwqqycil fcrgikerkh dyfswlritq vlstaiilgl lwwqsdskti
      541 rgrqdqagll ffiavfwgff pvftaiftfp qeramlgker aadmyrlsay flarttsdlp
      601 ldlilpvlfl lvvyfmaglk lsashfflsm ltvflcivaa qglglaigat lmdlkrattl
      661 asvtvmtfml aggyfvkkvp vfiswiryms fnyhtyklll kvqyqdimpt vngiktdsgl
      721 kevgalvami fgyrflayls lrkmqlhcea
//
LOCUS       XP_016714905             620 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714905
VERSION     XP_016714905.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859416.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..620
                     /product="ABC transporter G family member 22 isoform X2"
                     /calculated_mol_wt=69373
     Region          25..615
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..620
                     /gene="LOC107928227"
                     /coded_by="XM_016859416.2:262..2124"
                     /db_xref="GeneID:107928227"
ORIGIN      
        1 mfiyyvfssf gqmrtckvts tkerrftdvt ykviikgmts ceerdilngi tgavnpgevl
       61 almgpsgsgk ttllnllggr liqstvsgsi tyndqpyskf lksrigfvtq ddvlfphltv
      121 ketltyaarl rlpkvltrqq kekravdviy elglercqdt miggsfvrgv sggerkrvci
      181 gneiiinpsl lfldeptsgl dsttalrtiq tlqdiaevgk tvittihqps srlfhkfdkl
      241 illgkgslly fgkaseaivy fssigcspli amnpaeflld langnltdis vpseledkvq
      301 mensetetgn gkpppavvhe ylveayesrv adtekkklma plpldeelks kvssskrqwg
      361 aswwqqycil fcrgikerkh dyfswlritq vlstaiilgl lwwqsdskti rgrqdqagll
      421 ffiavfwgff pvftaiftfp qeramlgker aadmyrlsay flarttsdlp ldlilpvlfl
      481 lvvyfmaglk lsashfflsm ltvflcivaa qglglaigat lmdlkrattl asvtvmtfml
      541 aggyfvkkvp vfiswiryms fnyhtyklll kvqyqdimpt vngiktdsgl kevgalvami
      601 fgyrflayls lrkmqlhcea
//
LOCUS       XP_040943544             609 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 22 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943544
VERSION     XP_040943544.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087610.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..609
                     /product="ABC transporter G family member 22 isoform X3"
                     /calculated_mol_wt=67885
     Region          12..604
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..609
                     /gene="LOC107928227"
                     /coded_by="XM_041087610.1:478..2307"
                     /db_xref="GeneID:107928227"
ORIGIN      
        1 mrspilnpla tttyftdvty kviikgmtsc eerdilngit gavnpgevla lmgpsgsgkt
       61 tllnllggrl iqstvsgsit yndqpyskfl ksrigfvtqd dvlfphltvk etltyaarlr
      121 lpkvltrqqk ekravdviye lglercqdtm iggsfvrgvs ggerkrvcig neiiinpsll
      181 fldeptsgld sttalrtiqt lqdiaevgkt vittihqpss rlfhkfdkli llgkgsllyf
      241 gkaseaivyf ssigcsplia mnpaeflldl angnltdisv pseledkvqm ensetetgng
      301 kpppavvhey lveayesrva dtekkklmap lpldeelksk vssskrqwga swwqqycilf
      361 crgikerkhd yfswlritqv lstaiilgll wwqsdsktir grqdqagllf fiavfwgffp
      421 vftaiftfpq eramlgkera admyrlsayf larttsdlpl dlilpvlfll vvyfmaglkl
      481 sashfflsml tvflcivaaq glglaigatl mdlkrattla svtvmtfmla ggyfvkkvpv
      541 fiswirymsf nyhtyklllk vqyqdimptv ngiktdsglk evgalvamif gyrflaylsl
      601 rkmqlhcea
//
LOCUS       XP_040943545             583 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 22 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943545
VERSION     XP_040943545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087611.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..583
                     /product="ABC transporter G family member 22 isoform X4"
                     /calculated_mol_wt=64959
     Region          3..578
                     /region_name="PLN03211"
                     /note="ABC transporter G-25; Provisional"
                     /db_xref="CDD:215634"
     CDS             1..583
                     /gene="LOC107928227"
                     /coded_by="XM_041087611.1:160..1911"
                     /db_xref="GeneID:107928227"
ORIGIN      
        1 mtsceerdil ngitgavnpg evlalmgpsg sgkttllnll ggrliqstvs gsityndqpy
       61 skflksrigf vtqddvlfph ltvketltya arlrlpkvlt rqqkekravd viyelglerc
      121 qdtmiggsfv rgvsggerkr vcigneiiin psllfldept sgldsttalr tiqtlqdiae
      181 vgktvittih qpssrlfhkf dklillgkgs llyfgkasea ivyfssigcs pliamnpaef
      241 lldlangnlt disvpseled kvqmensete tgngkpppav vheylveaye srvadtekkk
      301 lmaplpldee lkskvssskr qwgaswwqqy cilfcrgike rkhdyfswlr itqvlstaii
      361 lgllwwqsds ktirgrqdqa gllffiavfw gffpvftaif tfpqeramlg keraadmyrl
      421 sayflartts dlpldlilpv lfllvvyfma glklsashff lsmltvflci vaaqglglai
      481 gatlmdlkra ttlasvtvmt fmlaggyfvk kvpvfiswir ymsfnyhtyk lllkvqyqdi
      541 mptvngiktd sglkevgalv amifgyrfla ylslrkmqlh cea
//
LOCUS       XP_016714878             469 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714878
VERSION     XP_016714878.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714878.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="protein WVD2-like 4 isoform X1"
                     /calculated_mol_wt=50619
     Region          244..322
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..469
                     /gene="LOC107928206"
                     /coded_by="XM_016859389.2:340..1749"
                     /db_xref="GeneID:107928206"
ORIGIN      
        1 mesenwvtve eeiivsektd ieesateekk kvhddadadi ngegdsnskq qetksegkts
       61 kapanvsktq lsrtlkesgn aknnkvtndk pnlrnavlis rnqrpvlsqs lsfparrihg
      121 dglvkstdlk hsqeksskth apssngsarl shpnrrgsih vdtkpanang ggassrrtti
      181 aslpsnkpak sgpgntaakp ssssesadsk piaatmqske dddahsttss atsrstrrss
      241 gsgftfrlee raekrkefls kleekihake veknnlqaks kenqeaeikq lrksltfkat
      301 pmpnfykepp pkvelkkipt traispklgr nksnvaatnn psevdgsvvr pslnqerncs
      361 tkrtqtngne envaskktvk kpqpkvqpke ttkaeekpgk skpktkkaen pvqdacvgkp
      421 eenpnkpinl pqskdaitvs geinpaqngg pipslansdt mprqvtvgg
//
LOCUS       XP_040943547             469 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943547
VERSION     XP_040943547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087613.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="protein WVD2-like 4 isoform X1"
                     /calculated_mol_wt=50619
     Region          244..322
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..469
                     /gene="LOC107928206"
                     /coded_by="XM_041087613.1:218..1627"
                     /db_xref="GeneID:107928206"
ORIGIN      
        1 mesenwvtve eeiivsektd ieesateekk kvhddadadi ngegdsnskq qetksegkts
       61 kapanvsktq lsrtlkesgn aknnkvtndk pnlrnavlis rnqrpvlsqs lsfparrihg
      121 dglvkstdlk hsqeksskth apssngsarl shpnrrgsih vdtkpanang ggassrrtti
      181 aslpsnkpak sgpgntaakp ssssesadsk piaatmqske dddahsttss atsrstrrss
      241 gsgftfrlee raekrkefls kleekihake veknnlqaks kenqeaeikq lrksltfkat
      301 pmpnfykepp pkvelkkipt traispklgr nksnvaatnn psevdgsvvr pslnqerncs
      361 tkrtqtngne envaskktvk kpqpkvqpke ttkaeekpgk skpktkkaen pvqdacvgkp
      421 eenpnkpinl pqskdaitvs geinpaqngg pipslansdt mprqvtvgg
//
LOCUS       XP_040943548             469 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943548
VERSION     XP_040943548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087614.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="protein WVD2-like 4 isoform X1"
                     /calculated_mol_wt=50619
     Region          244..322
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..469
                     /gene="LOC107928206"
                     /coded_by="XM_041087614.1:319..1728"
                     /db_xref="GeneID:107928206"
ORIGIN      
        1 mesenwvtve eeiivsektd ieesateekk kvhddadadi ngegdsnskq qetksegkts
       61 kapanvsktq lsrtlkesgn aknnkvtndk pnlrnavlis rnqrpvlsqs lsfparrihg
      121 dglvkstdlk hsqeksskth apssngsarl shpnrrgsih vdtkpanang ggassrrtti
      181 aslpsnkpak sgpgntaakp ssssesadsk piaatmqske dddahsttss atsrstrrss
      241 gsgftfrlee raekrkefls kleekihake veknnlqaks kenqeaeikq lrksltfkat
      301 pmpnfykepp pkvelkkipt traispklgr nksnvaatnn psevdgsvvr pslnqerncs
      361 tkrtqtngne envaskktvk kpqpkvqpke ttkaeekpgk skpktkkaen pvqdacvgkp
      421 eenpnkpinl pqskdaitvs geinpaqngg pipslansdt mprqvtvgg
//
LOCUS       XP_016714879             468 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714879
VERSION     XP_016714879.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714879.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="protein WVD2-like 4 isoform X2"
                     /calculated_mol_wt=50532
     Region          243..321
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..468
                     /gene="LOC107928206"
                     /coded_by="XM_016859390.2:392..1798"
                     /db_xref="GeneID:107928206"
ORIGIN      
        1 mesenwvtve eeiivsektd ieesateekk kvhddadadi ngegdsnskq qetksegkts
       61 kapanvsktq lsrtlkesgn aknnkvtndk pnlrnavlis rnqrpvlsqs lsfparrihg
      121 dglvkstdlk hsqeksskth apssngsarl shpnrrgsih vdtkpanang ggassrrtti
      181 aslpsnkpak sgpgntaakp ssssesadsk piaatmqske dddahsttsa tsrstrrssg
      241 sgftfrleer aekrkeflsk leekihakev eknnlqaksk enqeaeikql rksltfkatp
      301 mpnfykeppp kvelkkiptt raispklgrn ksnvaatnnp sevdgsvvrp slnqerncst
      361 krtqtngnee nvaskktvkk pqpkvqpket tkaeekpgks kpktkkaenp vqdacvgkpe
      421 enpnkpinlp qskdaitvsg einpaqnggp ipslansdtm prqvtvgg
//
LOCUS       XP_040943549             468 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943549
VERSION     XP_040943549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087615.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="protein WVD2-like 4 isoform X2"
                     /calculated_mol_wt=50532
     Region          243..321
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..468
                     /gene="LOC107928206"
                     /coded_by="XM_041087615.1:319..1725"
                     /db_xref="GeneID:107928206"
ORIGIN      
        1 mesenwvtve eeiivsektd ieesateekk kvhddadadi ngegdsnskq qetksegkts
       61 kapanvsktq lsrtlkesgn aknnkvtndk pnlrnavlis rnqrpvlsqs lsfparrihg
      121 dglvkstdlk hsqeksskth apssngsarl shpnrrgsih vdtkpanang ggassrrtti
      181 aslpsnkpak sgpgntaakp ssssesadsk piaatmqske dddahsttsa tsrstrrssg
      241 sgftfrleer aekrkeflsk leekihakev eknnlqaksk enqeaeikql rksltfkatp
      301 mpnfykeppp kvelkkiptt raispklgrn ksnvaatnnp sevdgsvvrp slnqerncst
      361 krtqtngnee nvaskktvkk pqpkvqpket tkaeekpgks kpktkkaenp vqdacvgkpe
      421 enpnkpinlp qskdaitvsg einpaqnggp ipslansdtm prqvtvgg
//
LOCUS       XP_040943550             468 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943550
VERSION     XP_040943550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087616.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="protein WVD2-like 4 isoform X2"
                     /calculated_mol_wt=50532
     Region          243..321
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..468
                     /gene="LOC107928206"
                     /coded_by="XM_041087616.1:208..1614"
                     /db_xref="GeneID:107928206"
ORIGIN      
        1 mesenwvtve eeiivsektd ieesateekk kvhddadadi ngegdsnskq qetksegkts
       61 kapanvsktq lsrtlkesgn aknnkvtndk pnlrnavlis rnqrpvlsqs lsfparrihg
      121 dglvkstdlk hsqeksskth apssngsarl shpnrrgsih vdtkpanang ggassrrtti
      181 aslpsnkpak sgpgntaakp ssssesadsk piaatmqske dddahsttsa tsrstrrssg
      241 sgftfrleer aekrkeflsk leekihakev eknnlqaksk enqeaeikql rksltfkatp
      301 mpnfykeppp kvelkkiptt raispklgrn ksnvaatnnp sevdgsvvrp slnqerncst
      361 krtqtngnee nvaskktvkk pqpkvqpket tkaeekpgks kpktkkaenp vqdacvgkpe
      421 enpnkpinlp qskdaitvsg einpaqnggp ipslansdtm prqvtvgg
//
LOCUS       XP_016714804             180 aa            linear   PLN 06-AUG-2024
DEFINITION  fra a 1-associated protein [Gossypium hirsutum].
ACCESSION   XP_016714804
VERSION     XP_016714804.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714804.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..180
                     /product="fra a 1-associated protein"
                     /calculated_mol_wt=20120
     CDS             1..180
                     /gene="LOC107928129"
                     /coded_by="XM_016859315.2:87..629"
                     /db_xref="GeneID:107928129"
ORIGIN      
        1 mgwvwkdepn davestardg dhcstrkviq skckteevep gkfvrkcekt eevlrecfgr
       61 pvevlqstke yteddvteqm lkgsfssgsh vegsfdfpgl rsdmeaierq ffgginrffd
      121 aaeemknnff nifgdaygrg sssapsirrg ipiedhkqke dspkptesgh idlsglakdi
//
LOCUS       XP_016714806             288 aa            linear   PLN 06-AUG-2024
DEFINITION  iron-sulfur cluster co-chaperone protein HscB homolog [Gossypium
            hirsutum].
ACCESSION   XP_016714806
VERSION     XP_016714806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="iron-sulfur cluster co-chaperone protein HscB
                     homolog"
                     /calculated_mol_wt=32989
     Region          124..>231
                     /region_name="hscB"
                     /note="Fe-S protein assembly co-chaperone HscB; PRK03578"
                     /db_xref="CDD:235133"
     Region          214..284
                     /region_name="HSCB_C"
                     /note="HSCB C-terminal oligomerization domain; pfam07743"
                     /db_xref="CDD:462252"
     CDS             1..288
                     /gene="LOC107928130"
                     /coded_by="XM_016859317.2:76..942"
                     /db_xref="GeneID:107928130"
ORIGIN      
        1 mrrtvislll leveskrkmy ktkklcapls tifrgvlptt rrlspyfsns ripslpshlq
       61 sssrvpprya lhflpnsnfs fqnlcsqsaa kldsstkrcw ncvadktgtt pflycdscrs
      121 iqpvdlsidy fqifglekky eievdglegk ykdwqkklhp dlvhskseke rgyaaeqsar
      181 vidayrtlsk plsraiyilr legvdvdeeq tvsdpellte imeireavee apdsqalnqi
      241 qskmeeklee ssnsfvnayq srnfdeavac iqrmtyyqra seeilkkl
//
LOCUS       XP_016714807             288 aa            linear   PLN 06-AUG-2024
DEFINITION  iron-sulfur cluster co-chaperone protein HscB homolog [Gossypium
            hirsutum].
ACCESSION   XP_016714807
VERSION     XP_016714807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="iron-sulfur cluster co-chaperone protein HscB
                     homolog"
                     /calculated_mol_wt=32989
     Region          124..>231
                     /region_name="hscB"
                     /note="Fe-S protein assembly co-chaperone HscB; PRK03578"
                     /db_xref="CDD:235133"
     Region          214..284
                     /region_name="HSCB_C"
                     /note="HSCB C-terminal oligomerization domain; pfam07743"
                     /db_xref="CDD:462252"
     CDS             1..288
                     /gene="LOC107928130"
                     /coded_by="XM_016859318.2:76..942"
                     /db_xref="GeneID:107928130"
ORIGIN      
        1 mrrtvislll leveskrkmy ktkklcapls tifrgvlptt rrlspyfsns ripslpshlq
       61 sssrvpprya lhflpnsnfs fqnlcsqsaa kldsstkrcw ncvadktgtt pflycdscrs
      121 iqpvdlsidy fqifglekky eievdglegk ykdwqkklhp dlvhskseke rgyaaeqsar
      181 vidayrtlsk plsraiyilr legvdvdeeq tvsdpellte imeireavee apdsqalnqi
      241 qskmeeklee ssnsfvnayq srnfdeavac iqrmtyyqra seeilkkl
//
LOCUS       XP_016714805             288 aa            linear   PLN 06-AUG-2024
DEFINITION  iron-sulfur cluster co-chaperone protein HscB homolog [Gossypium
            hirsutum].
ACCESSION   XP_016714805
VERSION     XP_016714805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..288
                     /product="iron-sulfur cluster co-chaperone protein HscB
                     homolog"
                     /calculated_mol_wt=32989
     Region          124..>231
                     /region_name="hscB"
                     /note="Fe-S protein assembly co-chaperone HscB; PRK03578"
                     /db_xref="CDD:235133"
     Region          214..284
                     /region_name="HSCB_C"
                     /note="HSCB C-terminal oligomerization domain; pfam07743"
                     /db_xref="CDD:462252"
     CDS             1..288
                     /gene="LOC107928130"
                     /coded_by="XM_016859316.2:120..986"
                     /db_xref="GeneID:107928130"
ORIGIN      
        1 mrrtvislll leveskrkmy ktkklcapls tifrgvlptt rrlspyfsns ripslpshlq
       61 sssrvpprya lhflpnsnfs fqnlcsqsaa kldsstkrcw ncvadktgtt pflycdscrs
      121 iqpvdlsidy fqifglekky eievdglegk ykdwqkklhp dlvhskseke rgyaaeqsar
      181 vidayrtlsk plsraiyilr legvdvdeeq tvsdpellte imeireavee apdsqalnqi
      241 qskmeeklee ssnsfvnayq srnfdeavac iqrmtyyqra seeilkkl
//
LOCUS       XP_016714863             345 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714863
VERSION     XP_016714863.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859374.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714863.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..345
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=38943
     Region          188..291
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..345
                     /gene="LOC107928199"
                     /coded_by="XM_016859374.2:412..1449"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mqftlnynpn prtryvsigf slsptipkpg vffrvlfpie staafpskpt phsrsrsqlh
       61 tqpespkred llnmvgwqrh lqcalrqvgr rlehnythst nyssvsrlns pvlprelpsy
      121 qklwkspasm spvlyryfqq lgistsrkll agsseetpia spltpvlaid sgkteekkvv
      181 pnrtkvqavl kkikqspkkv nlvaalvrgm rvedallqlq vtvkraaktv yqvihsaran
      241 athnhgldpd rllvaeafvg kglflkrvsy hgkgrsgike rpecrltvvv remtpeeeae
      301 larlrvskfr kltkrekrlv phkliettpi wnrkgrtqep ngmaa
//
LOCUS       XP_016714867             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714867
VERSION     XP_016714867.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859378.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714867.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_016859378.2:332..1150"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_016714866             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714866
VERSION     XP_016714866.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859377.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714866.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_016859377.2:941..1759"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_016714868             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714868
VERSION     XP_016714868.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859379.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714868.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_016859379.2:462..1280"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_016714865             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714865
VERSION     XP_016714865.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859376.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714865.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_016859376.2:1206..2024"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_016714869             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714869
VERSION     XP_016714869.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714869.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_016859380.2:1208..2026"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_040943552             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943552
VERSION     XP_040943552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087618.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_041087618.1:467..1285"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_016714870             272 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714870
VERSION     XP_016714870.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859381.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714870.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="50S ribosomal protein L22 isoform X2"
                     /calculated_mol_wt=30633
     Region          115..218
                     /region_name="Ribosomal_L22"
                     /note="Ribosomal protein L22p/L17e; pfam00237"
                     /db_xref="CDD:459725"
     CDS             1..272
                     /gene="LOC107928199"
                     /coded_by="XM_016859381.2:321..1139"
                     /db_xref="GeneID:107928199"
ORIGIN      
        1 mvgwqrhlqc alrqvgrrle hnythstnys svsrlnspvl prelpsyqkl wkspasmspv
       61 lyryfqqlgi stsrkllags seetpiaspl tpvlaidsgk teekkvvpnr tkvqavlkki
      121 kqspkkvnlv aalvrgmrve dallqlqvtv kraaktvyqv ihsaranath nhgldpdrll
      181 vaeafvgkgl flkrvsyhgk grsgikerpe crltvvvrem tpeeeaelar lrvskfrklt
      241 krekrlvphk liettpiwnr kgrtqepngm aa
//
LOCUS       XP_016714886             747 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714886
VERSION     XP_016714886.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859397.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714886.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..747
                     /product="uncharacterized protein"
                     /calculated_mol_wt=84167
     Region          39..174
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     CDS             1..747
                     /gene="LOC107928213"
                     /coded_by="XM_016859397.2:190..2433"
                     /db_xref="GeneID:107928213"
ORIGIN      
        1 mvvkmmrwrp wpplvskkye vklmvrrleg wdlkregeek pekltveirw kgpkaslgsl
       61 rrtvkrnftk evdggvgqng viiwdeefqt lcslsaykdn vfhpweiafs vlnglnqgpk
      121 nkatvvgtas lnlaeyasva ehkefeikip ltlstgaaep spqlcislsl lelrttqets
      181 epeqravvpi asplqsgesv tmekdelsai kaglrkvkif teyvstrrak kacredegse
      241 grcsarsddg eypldtdsld dfeegesdev kddstirksf sygtlahany aggsfyssvg
      301 iredwvyysn rksdagcsnf edsaasmsep sllltskrsi lpwrkrklsf rspkvkgepl
      361 lkkaygeegg ddidfdrrql ssdeslgwhk tdedssvnrt svsefgednf avgsweqkev
      421 vsrdghlklq shvffasidq rseraagesa ctalvaviad wfqkncdlmp iksqfdclir
      481 egslewrylc eneiyrewfp dkhfdletvl qakirplsav prksfigffh pegmdegqfd
      541 flhgamsfdn iwdeisraec lnsaepqvfi vswndhffil kvepeayyii dtlgerlyeg
      601 cnqayilkfd rdtiihklqp nvsqpsedks ngnqlvptaa aepknvqlqd gsiagavvtk
      661 peeqiktegn eevvcrgkes ckeyiksfla aipirelqad ikkglmasts lhrrlqiefh
      721 ytellqplpk tssaphsdev qltevta
//
LOCUS       XP_016714894             243 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714894
VERSION     XP_016714894.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714894.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26816
     CDS             1..243
                     /gene="LOC107928218"
                     /coded_by="XM_016859405.2:119..850"
                     /db_xref="GeneID:107928218"
ORIGIN      
        1 maksavyfll flmtaatpsl lvessddtnh aylpcsdtkv qisdgftfgi afasrqsfff
       61 nsslqlspcd rrlslsnans rlalfrpkvd eislltints sftpdvvggy mvafagrkya
      121 arslpafvan gtytvtsftl vlefkkgrlq nlfwkrdgca qcsgrsnfvc lnkqdcaint
      181 nncknhggsv dcsigiqlaf sgtdkhlsal nswyevenlr qyslfglysn lrdsltsqyn
      241 kff
//
LOCUS       XP_016714852             786 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g74360 [Gossypium hirsutum].
ACCESSION   XP_016714852
VERSION     XP_016714852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859363.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..786
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g74360"
                     /calculated_mol_wt=87718
     Region          10..>694
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          247..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          271..294
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          295..318
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          319..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          343..367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          368..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          392..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          416..439
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          440..463
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          464..484
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          543..587
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          588..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..634
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          635..658
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..786
                     /gene="LOC107928181"
                     /coded_by="XM_016859363.2:174..2534"
                     /db_xref="GeneID:107928181"
ORIGIN      
        1 mfqgkantwc stvvlmflil itafitvsgn slntdreill nlksflenqn rvnrgrysgw
       61 nrwtsnpcew hgimcspdme rvtginlsds kisgemfnnf saltqlhhld fsrntlkgli
      121 pddlnrchnl vylnlshnil ggelkltgla rlekldlstn rfhgevkfsf paicnrlvva
      181 nlsmnnfigr idtyfdgcln lmyldlssnk ftgniwtgfs rlvefsvsen rvsglipass
      241 fsdncnlkgl dlsvnmfhge vpreisnckk lvmlnlwgnk fsgpipselg sistleglll
      301 gnnefsrvip esllylnnla vldlsynnfg grlqeifgrf rqlkslvlqg nsyidglsss
      361 gihkltnisr ldlsynnfsg hlpaefsemv glkflilayn qftgpippqy gdlsqlqald
      421 lsfnrlirsi ppsigslrsl lwlmlannsl tgeipgelgn cssllwlnla nnqlsgrfpp
      481 elanigrnpt ltfesnrrsn vmiagpsdcl vtkrlltmdy spfgfiytil trkicknvwd
      541 qllqgygffq vcvkgspvrk yrvsgylqls gnqltgevps digkmqhfsv lhlsynqfng
      601 elpveignlp lvvlniswnk fsgqipreig nlnclqnldl shnnfsgifp tnlnclnels
      661 kfnisfnpqi agqipnigql atfeeesylg npllhsrllk lqdptvppln sgkqalpgee
      721 esedgfwwka llmeygcgma fgmvmlcicv vkvepkwvvn nveglhqlka vrpwkkngsr
      781 gggrti
//
LOCUS       XP_016714820             330 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit A-10 [Gossypium hirsutum].
ACCESSION   XP_016714820
VERSION     XP_016714820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859331.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..330
                     /product="nuclear transcription factor Y subunit A-10"
                     /calculated_mol_wt=36149
     Region          160..221
                     /region_name="CBF"
                     /note="CCAAT-Binding transcription Factor; smart00521"
                     /db_xref="CDD:128795"
     CDS             1..330
                     /gene="LOC107928144"
                     /coded_by="XM_016859331.2:325..1317"
                     /db_xref="GeneID:107928144"
ORIGIN      
        1 mamqtlhvke hdgivhnpmg qlapvpsqpw wsalgsqssi ygescgqlkn llmehpsngd
       61 hltctkqagr vteqglnkgn pahftifpgd gkcsgdgqks ptvislqsvp seqhsrfelg
      121 cgqppmvcak ypymdqcygv fstygppvsg rvmlplnias edgpiyvnak qyngilrrrq
      181 srakavlenk ltkarkpymh ysrhlhamrr prgcggrfln tktgkdeket kkyvegkdlh
      241 ttgsqnsevl qsdsgtlnss keaigggltl sgsevtsmys reelehnfpi nhlglsfhsf
      301 pvmmengsgs vmpnrwvapa dhclqpilrd
//
LOCUS       XP_016714854             556 aa            linear   PLN 06-AUG-2024
DEFINITION  (+)-delta-cadinene synthase isozyme A [Gossypium hirsutum].
ACCESSION   XP_016714854
VERSION     XP_016714854.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714854.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..556
                     /product="(+)-delta-cadinene synthase isozyme A"
                     /calculated_mol_wt=64348
     Region          23..553
                     /region_name="Terpene_cyclase_plant_C1"
                     /note="Plant Terpene Cyclases, Class 1; cd00684"
                     /db_xref="CDD:173832"
     Site            order(23..30,460..461,463..466,468..471,532..535)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173832"
     Site            order(272,281,302,304..306,309,313,384,450..451,453..454,
                     457,461,529,533,535)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173832"
     Site            order(309,313,453,457,461)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173832"
     Site            309..313
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173832"
     Site            453..461
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173832"
     CDS             1..556
                     /gene="LOC107928183"
                     /coded_by="XM_016859365.2:77..1747"
                     /db_xref="GeneID:107928183"
ORIGIN      
        1 masqvsqila sphtsipcnm enrpkadfhp giwgdiflnc pnedidtatq lryeelkeev
       61 rrmlvapmgd ssnqklplid avqrlgvyyh feeeiedale alyhdnndvd ndlyttslrf
      121 rllrehgfnv scevfdkfkd eegnfmssit tdvkgllely easymrvhge dildeaisft
      181 tthltlaapt leyplseqva halkqsirrg lprvearryi siyqdieshn kallefakid
      241 fnllqllhrk elseicrwwk dldftkklpf ardrvvegyf wimgvyfepq yslgrkmmtk
      301 viamasivdd tydsyatyde lipytnaier wdikcmdelp efmkisykal ldvyeemeql
      361 taeqgrqyrv eyarkamirl aqaylleakw thqnykptfe efrdnalpts gygmlaitaf
      421 vgmgdvitpe tfawatndpk iikastiicr fmddiaehkf khrreddcsa iecymeqygv
      481 taqeaydefn khiesswkdv neeflkptem pvpvlnrsln larvmdvlyr egdgythvgk
      541 aakggitsll idpipl
//
LOCUS       XP_016714855             402 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PUB23 [Gossypium hirsutum].
ACCESSION   XP_016714855
VERSION     XP_016714855.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714855.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..402
                     /product="E3 ubiquitin-protein ligase PUB23"
                     /calculated_mol_wt=44289
     Site            order(8,11,13..16,35,39,49)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          10..73
                     /region_name="Ubox"
                     /note="Modified RING finger domain; smart00504"
                     /db_xref="CDD:128780"
     CDS             1..402
                     /gene="LOC107928185"
                     /coded_by="XM_016859366.2:1..1209"
                     /db_xref="GeneID:107928185"
ORIGIN      
        1 mdeidvppff icpislefmk dpvtvstgit ydresiekwl fsgknttcpv tkqvivdcel
       61 tpnhtlrrli qswcllnash gieriptpkp piskaqiikl lddakspqqq ikclkrlrsi
      121 asqnvtnkrc messgavefl vsivinndst vaeestidea lsilyslqls eaalkklmak
      181 ngdfivsltr vmqggsyesr vfavlllksm vemagpmqli nlrpelfvel vkvlcdqisq
      241 qatkaalkll vytcplgrnk ikaaeagvvp vlinmlldss ekracemilt vldavcgcae
      301 grlelishga glaivskkil rvsqvasera vrillsiskf catinvlqem lqlgvvtklc
      361 lvlqldcgyk tkekarevlk lharvwknsp clptyllssy pa
//
LOCUS       XP_016714856             245 aa            linear   PLN 06-AUG-2024
DEFINITION  dof zinc finger protein DOF3.5 [Gossypium hirsutum].
ACCESSION   XP_016714856
VERSION     XP_016714856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..245
                     /product="dof zinc finger protein DOF3.5"
                     /calculated_mol_wt=27266
     Region          14..67
                     /region_name="zf-Dof"
                     /note="Dof domain, zinc finger; pfam02701"
                     /db_xref="CDD:397014"
     CDS             1..245
                     /gene="LOC107928186"
                     /coded_by="XM_016859367.2:533..1270"
                     /db_xref="GeneID:107928186"
ORIGIN      
        1 mergwkprme ispncprcgs sntkfcyynn ysltqpryfc kgcrrywtkg gslrnvpvgg
       61 gcrknrrgks lrlptdgaqt kslscdsfrh syastesnss ssmsdgshid lalvyanfls
      121 nqqpenksgf evpelrtefd pslefsriln tnmassiqlp eengldlste nhlsnngqiy
      181 csggnhglpp lpgddlpwpn sqstmspslq atqepvlepe thdpnqlfgn wnpfdlysdd
      241 tfsrt
//
LOCUS       XP_016714853             634 aa            linear   PLN 06-AUG-2024
DEFINITION  BEL1-like homeodomain protein 1 [Gossypium hirsutum].
ACCESSION   XP_016714853
VERSION     XP_016714853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..634
                     /product="BEL1-like homeodomain protein 1"
                     /calculated_mol_wt=69048
     Region          159..296
                     /region_name="POX"
                     /note="Associated with HOX; pfam07526"
                     /db_xref="CDD:429514"
     Site            order(346..350,352,372,378,391,393..394,397..398,400..402,
                     404..405)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(348,351,394,397..398,401)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          364..402
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..634
                     /gene="LOC107928182"
                     /coded_by="XM_016859364.2:827..2731"
                     /db_xref="GeneID:107928182"
ORIGIN      
        1 matyfhgnpe iqapdglqtl vlmnpayvqy sdttpppqpn nlvfhapppp htqqfvgvpl
       61 tatstaiqdp psheisplhg lvqrvhynly npidpsgaar etpraqqgls lslssqqqrh
      121 hhgygshaqa vsgedmrvsg gsgssgsgvt ngvsgvqsml fsskflkaaq elldevvnvn
      181 ntgitknela kkgsgggdns nigkavgesa aaagdadgkq gpelttaerq eiqmkkakli
      241 smldevdqry rqyhhqmqiv issfeqaagi gsaktytsla lktiskqfrc lkdaitgqir
      301 aakqslgeed clggskiegs rlklvdhhlr qqralqqlgm iqhnawrpqr glpersvsvl
      361 rswlfehflh pypkdsdkvm lakqtgltrs qvsnwfinar vrlwkpmvee myleeikeqe
      421 qngseektsk shnnedstsk stapdktstd nkqdnnipnq ngcssmsasm asasplignq
      481 sgfsfigsse legitqgspk kprtnnevtm kfdkdgytfm ggttnndfmg gfgqypigei
      541 trfdteqftp rfsgngvslt lglphcenls lsgtphqtfl pnqamqmgrr vdigepnefg
      601 sinpstphss aaydniniqn rkrfaaqllp dfva
//
LOCUS       XP_016714851             793 aa            linear   PLN 06-AUG-2024
DEFINITION  digalactosyldiacylglycerol synthase 1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016714851
VERSION     XP_016714851.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859362.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714851.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..793
                     /product="digalactosyldiacylglycerol synthase 1,
                     chloroplastic"
                     /calculated_mol_wt=89610
     Region          28..793
                     /region_name="PLN02501"
                     /note="digalactosyldiacylglycerol synthase"
                     /db_xref="CDD:215277"
     CDS             1..793
                     /gene="LOC107928180"
                     /coded_by="XM_016859362.2:180..2561"
                     /db_xref="GeneID:107928180"
ORIGIN      
        1 mdkgsqttaa vaaattttst snssafsfis kgwrevrdsa dadlqlmkdr antfknlaas
       61 fdreienliq satptfsvpa irqsseidfm kklqpkisef rrvysapeis rrvmekwgpr
      121 aklgidlsri rsaivaevde teeedmygiv efnkfkkgrr arfteegqfg dwepiralkt
      181 rlrefekkna sveifggfkn sefvekvkss lkaiikepqe skdvppldvp ellaylvrqs
      241 gpfldqlgvr rdlcdkives lcskrknqlv lrslaegepp tvdsdkinde ldlriasvlq
      301 stghcyeggf wtdfvkhdvs dgkrhvaivt taslpwmtgt avnplfraay laksakqkvt
      361 llvpwlcrsd qelvypnnlt fsspeeqeny irnwleertg fkadfkisfy pgkfskerrs
      421 iipagdtsqf ipskdadici leepehlnwy hhgkrwtdkf nhvvgivhtn yleyikrekn
      481 galqaflvkh innwvtrayc hkvlrlsaat qdlpksvicn vhgvnpkflk igekvaeere
      541 lgqqafskea yflgkmvwak gykelidlla khkndldgfk ldvygngeda hevqstakrl
      601 nlnlnflkgr dhaddslhgy kifinpsvsd vlctataeal amgkfvvcad hpsneffrsf
      661 pncltyksse dfvakvkeal anepqpltpe qiynlsweaa tqrfveysel drvlnnrhnp
      721 akvgskiiak ssslpnlsei vdgglafahy cltgnellrl ctgaipgtrd ydkqhckdlh
      781 llppqvenpi ygw
//
LOCUS       XP_016714857             260 aa            linear   PLN 06-AUG-2024
DEFINITION  ribosome biogenesis protein NSA2 homolog [Gossypium hirsutum].
ACCESSION   XP_016714857
VERSION     XP_016714857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..260
                     /product="ribosome biogenesis protein NSA2 homolog"
                     /calculated_mol_wt=29627
     Region          4..260
                     /region_name="NSA2"
                     /note="pre-ribosomal protein NSA2 (Nop seven-associated
                     2); cd11381"
                     /db_xref="CDD:211393"
     CDS             1..260
                     /gene="LOC107928187"
                     /coded_by="XM_016859368.2:209..991"
                     /db_xref="GeneID:107928187"
ORIGIN      
        1 mpqgdyielh rkrhgyrhdf fekkrkkear qvhersakaq kalgikgkmi akknyaekal
       61 mkktlamhee sstrrkvdde vrdgaipayl mdrenttrak vlsntikqkr kekagkwevp
      121 ipkvrpvaed emfkvlrtgk rktkqwkrmv tkctfvgpgf trkppkyerf irpsglrftk
      181 ahvthpelkc tfnldiigvk knpngpmyts lgvmtkgtii evnvselglv tpagkvvwgk
      241 yaqvtnnpen dgcinavllv
//
LOCUS       XP_016714849             953 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein kinase TMK1 [Gossypium hirsutum].
ACCESSION   XP_016714849
VERSION     XP_016714849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..953
                     /product="receptor protein kinase TMK1"
                     /calculated_mol_wt=103719
     Region          81..874
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          95..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..393
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          394..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          613..886
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(613..617,621,633,635,666,682..685,689,691,736,738,
                     740..741,743,754,757,774..777)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(613..617,621,633,635,666,682..685,689,736,738,
                     740..741,743,754)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(617,689,691,736,738,740,757,774..777)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(753..760,770..777)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..953
                     /gene="LOC107928179"
                     /coded_by="XM_016859360.2:431..3292"
                     /db_xref="GeneID:107928179"
ORIGIN      
        1 mqhkksvmrn kfasllvlsl vtvvlsitdp gdldvlmqfr dglenpellk wpenggdpcg
       61 ppswnhvfca esrvtqiqaq gmglkgslpq nlnkltmlnn iglqrnqlng klpsfsglsn
      121 lqyayldynn fdsipadffd glddlealal dhnnfnattg wsipkalqns aqltnfscms
      181 cnligslpdf lgsmpsltnl klsdnklsge ipntfngsvl qmlwlngnqf tglidvvatm
      241 esltvlwlhg nlfsgpipdn ignltllqdl nlntnnlvgl ipnslanmkl dtidlnnnqf
      301 mgpipmfkas nvtcasnkfc kasqglpcsp evmallrflr evnypsrlvs swtdnepcnw
      361 vgircngekv siinlphynl sgtlspsvan ldslsqirlq snnlsgpvpd nwtslkslet
      421 ldlsgnnisg plpkfgstvk lliadnplln gdkkapstgd napsrslgfp tnsrstsskg
      481 sgssptdssv estepkgskq sifvsivvpv asfvvlaflv vplsiycckk rqdsklapsl
      541 vihprdlsds dnavkvvvvs ntkgstsala gsgsasrnss nigeshiiea gnlvisvqvl
      601 rnvtknfape nelgrggfgv vykgelddgt qiavkrmeag vitskaldef qseiavlskv
      661 rhrhlvsllg ysiegneril vyeymtqgal sqhlfhwksl kleplswkrr lnialdvarg
      721 meylhtlahq sfihrdlkss nillgddfra kvadfglvkl apdgeksvvt rlagtfgyla
      781 peyavtgkit tkadvfsfgv vlmelltglm alddgrpeet qylaawfwni ksdkeklraa
      841 idptldikde tfesisiiae laghctarep nqrpdmghav nvlaplvekw kpldddsdey
      901 cgidyslpln qmvkgwqeae gkefsymdle dskgsiparp tgfadpftsa dgr
//
LOCUS       XP_016714850             953 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein kinase TMK1 [Gossypium hirsutum].
ACCESSION   XP_016714850
VERSION     XP_016714850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..953
                     /product="receptor protein kinase TMK1"
                     /calculated_mol_wt=103719
     Region          81..874
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          95..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..393
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          394..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          613..886
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(613..617,621,633,635,666,682..685,689,691,736,738,
                     740..741,743,754,757,774..777)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(613..617,621,633,635,666,682..685,689,736,738,
                     740..741,743,754)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(617,689,691,736,738,740,757,774..777)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(753..760,770..777)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..953
                     /gene="LOC107928179"
                     /coded_by="XM_016859361.2:275..3136"
                     /db_xref="GeneID:107928179"
ORIGIN      
        1 mqhkksvmrn kfasllvlsl vtvvlsitdp gdldvlmqfr dglenpellk wpenggdpcg
       61 ppswnhvfca esrvtqiqaq gmglkgslpq nlnkltmlnn iglqrnqlng klpsfsglsn
      121 lqyayldynn fdsipadffd glddlealal dhnnfnattg wsipkalqns aqltnfscms
      181 cnligslpdf lgsmpsltnl klsdnklsge ipntfngsvl qmlwlngnqf tglidvvatm
      241 esltvlwlhg nlfsgpipdn ignltllqdl nlntnnlvgl ipnslanmkl dtidlnnnqf
      301 mgpipmfkas nvtcasnkfc kasqglpcsp evmallrflr evnypsrlvs swtdnepcnw
      361 vgircngekv siinlphynl sgtlspsvan ldslsqirlq snnlsgpvpd nwtslkslet
      421 ldlsgnnisg plpkfgstvk lliadnplln gdkkapstgd napsrslgfp tnsrstsskg
      481 sgssptdssv estepkgskq sifvsivvpv asfvvlaflv vplsiycckk rqdsklapsl
      541 vihprdlsds dnavkvvvvs ntkgstsala gsgsasrnss nigeshiiea gnlvisvqvl
      601 rnvtknfape nelgrggfgv vykgelddgt qiavkrmeag vitskaldef qseiavlskv
      661 rhrhlvsllg ysiegneril vyeymtqgal sqhlfhwksl kleplswkrr lnialdvarg
      721 meylhtlahq sfihrdlkss nillgddfra kvadfglvkl apdgeksvvt rlagtfgyla
      781 peyavtgkit tkadvfsfgv vlmelltglm alddgrpeet qylaawfwni ksdkeklraa
      841 idptldikde tfesisiiae laghctarep nqrpdmghav nvlaplvekw kpldddsdey
      901 cgidyslpln qmvkgwqeae gkefsymdle dskgsiparp tgfadpftsa dgr
//
LOCUS       XP_016714897             433 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 27 [Gossypium
            hirsutum].
ACCESSION   XP_016714897
VERSION     XP_016714897.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859408.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714897.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..433
                     /product="mediator of RNA polymerase II transcription
                     subunit 27"
                     /calculated_mol_wt=47800
     Region          326..428
                     /region_name="Med27"
                     /note="Mediator complex subunit 27; pfam11571"
                     /db_xref="CDD:463298"
     CDS             1..433
                     /gene="LOC107928222"
                     /coded_by="XM_016859408.2:84..1385"
                     /db_xref="GeneID:107928222"
ORIGIN      
        1 mlqqhhqqqh hhhlqsaita apppsattst ppssttgeap pkqvalamdr lgqaarliad
       61 irlgadrlle alfvasqphq sskplhlfrq edesmrqhlq dlrtvgkqle esgvlneslr
      121 srsnswglhm plvcpdgavv ayawkrqlag qagasavdrt rlalkaftdq krrffphldd
      181 eedgegtdta skkhrnlpal aednqdnlsd cktlsdvltn mekerpnlkv styerldwlk
      241 rasslpasan dntmeapkhn fhgtsilrpa lqnvasmdkv avielffpsi fravvslhpa
      301 gstdpdsvaf fspdeggsym hsrgssvyhv frqitehatv alqyflgirs ktalhsllhw
      361 icsyqtlftk vcnkcgrlla mdrqsalilp pvhrpyrtls vskhsstqsi sstldqgsna
      421 peayhigcfs dnt
//
LOCUS       XP_016714907             264 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 27, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016714907
VERSION     XP_016714907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859418.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..264
                     /product="nudix hydrolase 27, chloroplastic"
                     /calculated_mol_wt=29908
     Region          56..205
                     /region_name="NUDIX_Ap4A_hydrolase_plant_like"
                     /note="plant diadenosine tetraphosphate (Ap4A) hydrolase
                     and similar proteins; cd03671"
                     /db_xref="CDD:467539"
     CDS             1..264
                     /gene="LOC107928229"
                     /coded_by="XM_016859418.2:182..976"
                     /db_xref="GeneID:107928229"
ORIGIN      
        1 magcqlvgns vfygterrnc hcqlvkfsgv plfypllnvp ltkisaslsn egppdgyrkn
       61 vgiclvnpsk kiftasriyi pntwqmpqgg ankgedlrka amrelreetg vtsaeflaea
      121 pywltydfpi kvkdklnrrw gtnykgqaqk wflfkftgne eeinllgdgs ekpefkewsw
      181 rlpeqvvela vdfkkpvyeq vlkvfspyfs sdadkeqclt knernggkih kqttkrsstk
      241 nkpnggkkih kqtkrcstsl qgqv
//
LOCUS       XP_016714826             229 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714826
VERSION     XP_016714826.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714826.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..229
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26098
     CDS             1..229
                     /gene="LOC107928151"
                     /coded_by="XM_016859337.2:137..826"
                     /db_xref="GeneID:107928151"
ORIGIN      
        1 mannfsnspp nlddgelwlp sdifvhepps kfnphlhhhh lpftclddla prfaalslpk
       61 hhqklpkvtn fqrleepvry gsvhgaglgq nshgfrngpf lagtkpvyef qflkqtlaqv
      121 esyvearvrs lqrqqqnrlf qnrglpfean gfnnyklglg gglvresggt gvfhprivnt
      181 pfdstkkqsm rnrqpqemkk smkrvgvvkq edcyynlppe mgfhrdrtw
//
LOCUS       XP_016714885             209 aa            linear   PLN 06-AUG-2024
DEFINITION  NDR1/HIN1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016714885
VERSION     XP_016714885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859396.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..209
                     /product="NDR1/HIN1-like protein 1"
                     /calculated_mol_wt=23428
     Region          74..177
                     /region_name="LEA_2"
                     /note="Late embryogenesis abundant protein; pfam03168"
                     /db_xref="CDD:427176"
     CDS             1..209
                     /gene="LOC107928212"
                     /coded_by="XM_016859396.2:194..823"
                     /db_xref="GeneID:107928212"
ORIGIN      
        1 msvkecgnhg kyrrkifrri iagilifiii vlitilliwa ilrpskprfi lqdttvyafn
       61 astpnlltsn fqvtlssrnp ndrigiyydr ldvyatyqnq qitlrtsipp tyqghkeinv
      121 wspfvngnsv piapeysasl gsdqsagsvf lmikidgrvr wkvgtfisgr yhlyvrcpaf
      181 itfgsksngv svgenaikyq lvtrcsvsv
//
LOCUS       XP_016714822             468 aa            linear   PLN 06-AUG-2024
DEFINITION  probable aspartyl protease At4g16563 [Gossypium hirsutum].
ACCESSION   XP_016714822
VERSION     XP_016714822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..468
                     /product="probable aspartyl protease At4g16563"
                     /calculated_mol_wt=51034
     Region          89..467
                     /region_name="pepsin_A_like_plant"
                     /note="Chroloplast Nucleoids DNA-binding Protease and
                     Nucellin, pepsin-like aspartic proteases from plants;
                     cd05476"
                     /db_xref="CDD:133143"
     Site            order(108..111,336..339)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133143"
     Site            order(108,336)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133143"
     Site            order(129,137..139,143..146)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133143"
     CDS             1..468
                     /gene="LOC107928146"
                     /coded_by="XM_016859333.2:98..1504"
                     /db_xref="GeneID:107928146"
ORIGIN      
        1 mdsslpffsf vsfliisatf pfaatsgtik vslspshhhh ssssdpyqil nnlatssvar
       61 ahhlkhhnpk tnitssllkt plfphgyggy tvslsfgtpp qtlsfimdtg sslswfpcts
      121 rylcsqcafp nvdpskiptf spnlsssgkl vgcrnpkcnw lfgpnvesrc qdcdgptskn
      181 cnqtcppyli qyglgstggl lllenlvfpp hktfqdflvg csivsnrqpa givgfgrspe
      241 slpsqlhlnk fsyclvsrrf ddtkvssnml letgsgsnht kipglgytpf yknpnpafhe
      301 fyyvtirkil vgnkqvkvpn stfvpgpdgn ggtivdsgst ftfmerpvfe lvskefqkqm
      361 gnysrareve nisglapcfn vsghrlmdvp emsfyfngga kmglplanyf sivgddsvvc
      421 lmivtdkgvg egarsgpaii lgnfqqqnyy iefdlannrf gfakrnca
//
LOCUS       XP_016714860             215 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714860
VERSION     XP_016714860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859371.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG7 isoform X1"
                     /calculated_mol_wt=23601
     Region          10..188
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..215
                     /gene="LOC107928192"
                     /coded_by="XM_016859371.2:136..783"
                     /db_xref="GeneID:107928192"
ORIGIN      
        1 meetksrfkr icvfcgsssg kkasyqeaav elgkelverr idlvygggsv glmglisqav
       61 hdggrhvlgv iprtlmprei tgvtvgevra vsdmhqrkae marqadafia lpggygtlee
      121 llevitwaql gihhkpvgll nvdgfynsll cfidkavdeg fisplarrii vsaptakqlv
      181 rqleeyvpqq dkitsklvwe evdrfsyvse seiai
//
LOCUS       XP_040943555             163 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943555
VERSION     XP_040943555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087621.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..163
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG7 isoform X2"
                     /calculated_mol_wt=17949
     Region          1..130
                     /region_name="Lysine_decarbox"
                     /note="Possible lysine decarboxylase; pfam03641"
                     /db_xref="CDD:397621"
     CDS             1..163
                     /gene="LOC107928192"
                     /coded_by="XM_041087621.1:596..1087"
                     /db_xref="GeneID:107928192"
ORIGIN      
        1 mglisqavhd ggrhvlgvip rtlmpreitg vtvgevravs dmhqrkaema rqadafialp
       61 ggygtleell evitwaqlgi hhkpvgllnv dgfynsllcf idkavdegfi splarriivs
      121 aptakqlvrq leeyvpqqdk itsklvweev drfsyvsese iai
//
LOCUS       XP_016714838             199 aa            linear   PLN 06-AUG-2024
DEFINITION  HVA22-like protein j [Gossypium hirsutum].
ACCESSION   XP_016714838
VERSION     XP_016714838.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859349.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714838.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="HVA22-like protein j"
                     /calculated_mol_wt=23148
     Region          19..97
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..199
                     /gene="LOC107928168"
                     /coded_by="XM_016859349.2:323..922"
                     /db_xref="GeneID:107928168"
ORIGIN      
        1 mlgdfltrll vlilgyaypa fecfktvekn kvgieelrfw cqywilmafl ivfervgevf
       61 iswlpmygem kiallvylwy pktkgtgyvy dtlfrpfmar hetevdrkiq evkariwdfi
      121 skycqnfaem gqgkffemlq yianqsnkfk qqaqrpdnpv paaanghrsq sggsetrtst
      181 tinrsaldsp rlrprpvqt
//
LOCUS       XP_040943556             199 aa            linear   PLN 06-AUG-2024
DEFINITION  HVA22-like protein j [Gossypium hirsutum].
ACCESSION   XP_040943556
VERSION     XP_040943556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087622.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="HVA22-like protein j"
                     /calculated_mol_wt=23148
     Region          19..97
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..199
                     /gene="LOC107928168"
                     /coded_by="XM_041087622.1:251..850"
                     /db_xref="GeneID:107928168"
ORIGIN      
        1 mlgdfltrll vlilgyaypa fecfktvekn kvgieelrfw cqywilmafl ivfervgevf
       61 iswlpmygem kiallvylwy pktkgtgyvy dtlfrpfmar hetevdrkiq evkariwdfi
      121 skycqnfaem gqgkffemlq yianqsnkfk qqaqrpdnpv paaanghrsq sggsetrtst
      181 tinrsaldsp rlrprpvqt
//
LOCUS       XP_016714813             173 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714813
VERSION     XP_016714813.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859324.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714813.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..173
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18870
     CDS             1..173
                     /gene="LOC107928137"
                     /coded_by="XM_016859324.2:281..802"
                     /db_xref="GeneID:107928137"
ORIGIN      
        1 medglgqspt stirrrnsit tpvqiptklt lltpkplqta tslsngsata plpldlelis
       61 lkasfasyts lkdilpspav avnsptaags atnsgyeisi rnrlvkqaaw aylqpmsasp
      121 dssgthffrr fwlrlssqnp fssclrfihl kllpgltrlf driirsirii ftr
//
LOCUS       XP_016714821             214 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor OFP6 [Gossypium hirsutum].
ACCESSION   XP_016714821
VERSION     XP_016714821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..214
                     /product="transcription repressor OFP6"
                     /calculated_mol_wt=23335
     Region          124..181
                     /region_name="Ovate"
                     /note="Transcriptional repressor, ovate; pfam04844"
                     /db_xref="CDD:461454"
     CDS             1..214
                     /gene="LOC107928145"
                     /coded_by="XM_016859332.2:260..904"
                     /db_xref="GeneID:107928145"
ORIGIN      
        1 mssnkkklvl ntvsvslgcs ssclkpklts ffnpkpklkl kikpkshslc nnysssssst
       61 kktthcslse netgtsfspg tdtamfwdmd idtdgpdsas kssmatvrgf ghvggdslav
      121 ekdsddpyld frqsmlqmil ekeiyskddl kellncflql nspyhhgiiv rafteiwngv
      181 fsvkpgsgtv vrrrcvlglg hgssreirsn glik
//
LOCUS       XP_016714829             273 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor OFP15 [Gossypium hirsutum].
ACCESSION   XP_016714829
VERSION     XP_016714829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..273
                     /product="transcription repressor OFP15"
                     /calculated_mol_wt=30474
     Region          129..183
                     /region_name="Ovate"
                     /note="Transcriptional repressor, ovate; pfam04844"
                     /db_xref="CDD:461454"
     CDS             1..273
                     /gene="LOC107928155"
                     /coded_by="XM_016859340.2:78..899"
                     /db_xref="GeneID:107928155"
ORIGIN      
        1 mgkkikfpfl snaknnivrq pksswqwpsc hqprtlsfrt dnnttlfkni nsayldaiti
       61 adenetppsd dcletvirgl rsdrlffkpg etssimeeat kpseeeeeee eeeedglpfk
      121 esvvlsmesr dpyvdfresm eemveaqgln dweeleqllc wylkangkcn hgfiigafid
      181 llvgkltivs snpksdncsp ssplsfytss ssssssssse dcssatinea vkeiddnsch
      241 clfeadnkke miiiegneed dasslldvcd ssy
//
LOCUS       XP_016714881             146 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1D [Gossypium hirsutum].
ACCESSION   XP_016714881
VERSION     XP_016714881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859392.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="ubiquitin-conjugating enzyme E2 variant 1D"
                     /calculated_mol_wt=16472
     Region          10..143
                     /region_name="UEV_UBE2V"
                     /note="ubiquitin E2 variant (UEV) domain of
                     ubiquitin-conjugating enzyme E2 variant 1, 2 and related
                     proteins; cd23807"
                     /db_xref="CDD:467427"
     CDS             1..146
                     /gene="LOC107928208"
                     /coded_by="XM_016859392.2:163..603"
                     /db_xref="GeneID:107928208"
ORIGIN      
        1 mtlgsggssv vvprnfrlle elergekgig dgtvsygmdd gddiymrswt gtiigphntv
       61 hegriyqlkl fcdkdypekp psvrfhsrin mtcvnhetgv vepkkfglla nwqreytmed
      121 lltqlkkema aphnrklvqp pegtyf
//
LOCUS       XP_016714880             146 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1D [Gossypium hirsutum].
ACCESSION   XP_016714880
VERSION     XP_016714880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="ubiquitin-conjugating enzyme E2 variant 1D"
                     /calculated_mol_wt=16472
     Region          10..143
                     /region_name="UEV_UBE2V"
                     /note="ubiquitin E2 variant (UEV) domain of
                     ubiquitin-conjugating enzyme E2 variant 1, 2 and related
                     proteins; cd23807"
                     /db_xref="CDD:467427"
     CDS             1..146
                     /gene="LOC107928208"
                     /coded_by="XM_016859391.2:166..606"
                     /db_xref="GeneID:107928208"
ORIGIN      
        1 mtlgsggssv vvprnfrlle elergekgig dgtvsygmdd gddiymrswt gtiigphntv
       61 hegriyqlkl fcdkdypekp psvrfhsrin mtcvnhetgv vepkkfglla nwqreytmed
      121 lltqlkkema aphnrklvqp pegtyf
//
LOCUS       XP_016714811             274 aa            linear   PLN 06-AUG-2024
DEFINITION  momilactone A synthase [Gossypium hirsutum].
ACCESSION   XP_016714811
VERSION     XP_016714811.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714811.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="momilactone A synthase"
                     /calculated_mol_wt=28811
     Region          10..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20,22..23,25,44..46,95..97,147..149,162,166,
                     192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187587"
     Site            order(121,149,162,166)
                     /site_type="active"
                     /db_xref="CDD:187587"
     CDS             1..274
                     /gene="LOC107928135"
                     /coded_by="XM_016859322.2:449..1273"
                     /db_xref="GeneID:107928135"
ORIGIN      
        1 mssessmikr ldgkvalitg gasglgecsa rlfvkqgakv liadiqdelg hsicqelgte
       61 nisyvhcdvt cesdvenavn lavskygkld imfnnaglig dgevrvtdas tdnfkrvfdi
      121 nvlggflgak yaakvmvpak kgcilfsssi sskisiglph aykaskhgvv gltkslavel
      181 gehgirvnci sphatvtplf lttlgmfdkk kgeemiatsa vlkgtvlepe dfahaalyla
      241 sdeakfisgv nlpvdggysl snqswkmgfa alfg
//
LOCUS       XP_016714824             274 aa            linear   PLN 06-AUG-2024
DEFINITION  secoisolariciresinol dehydrogenase [Gossypium hirsutum].
ACCESSION   XP_016714824
VERSION     XP_016714824.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714824.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="secoisolariciresinol dehydrogenase"
                     /calculated_mol_wt=28807
     Region          10..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20,22..23,25,44..46,95..97,147..149,162,166,
                     192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(121,149,162,166)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..274
                     /gene="LOC107928149"
                     /coded_by="XM_016859335.2:243..1067"
                     /db_xref="GeneID:107928149"
ORIGIN      
        1 mssdssitkr ldgkvalitg gasglgecta klfvkngaev liadiqdelg hsvcqelgte
       61 nisyvhcdvt cesdvenavn lavskygkld imfnnagipg dnevrvthag tedfkrvfdv
      121 nvlggflgak yaarvmvpak kgcilftasl askisfglph aykeskhaia gltkslsvel
      181 gehgirvnci spngivtpml qkaignvdkk kgeemvavsa vlkgtvlepe dfahaalyla
      241 sdeakfisgv nlpvdgaysv nnqswkmgfa alse
//
LOCUS       XP_016714909             281 aa            linear   PLN 06-AUG-2024
DEFINITION  momilactone A synthase [Gossypium hirsutum].
ACCESSION   XP_016714909
VERSION     XP_016714909.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859420.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714909.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..281
                     /product="momilactone A synthase"
                     /calculated_mol_wt=29538
     Region          10..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20,22..23,25,44..46,95..97,147..149,162,166,
                     192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(121,149,162,166)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..281
                     /gene="LOC107928231"
                     /coded_by="XM_016859420.2:146..991"
                     /db_xref="GeneID:107928231"
ORIGIN      
        1 maseslvtkr ldgkvalitg gasglgecsa rlflkhgakv liadiqdelg hslckelgte
       61 nfsyvhcdvt cesdvenavn lavskygkld imfnnaglig dgevrvtdas tdnfkrvfdi
      121 nvlggflgak yaakvmvpak kgcilfsssi sskisiglph aykaskhgvv gltkslavel
      181 gehgirvnci sphatvtplf qttlglldkk kgeemiaasa vlkgtvlepe dfahaalyla
      241 sdeakfisgv nvpvdggysl snqswkmgfa alldkstspl f
//
LOCUS       XP_016714797             274 aa            linear   PLN 06-AUG-2024
DEFINITION  momilactone A synthase [Gossypium hirsutum].
ACCESSION   XP_016714797
VERSION     XP_016714797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..274
                     /product="momilactone A synthase"
                     /calculated_mol_wt=28780
     Region          10..258
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20,22..23,25,44..46,95..97,147..149,162,166,
                     192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(121,149,162,166)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..274
                     /gene="LOC107928123"
                     /coded_by="XM_016859308.2:132..956"
                     /db_xref="GeneID:107928123"
ORIGIN      
        1 maseslvtkr ldgkvalitg gasglgecsa rlflkhgakv liadiqdelg hslckelgte
       61 nfsyvhcdvt cesdvenavn lavskygkld imfnnaglig dgevrvtdas tdnfkrvfdi
      121 nvlggflgak yaakvmvpak kgcilfsssi sskisiglph aykaskhgvv gltkslavel
      181 gehgirvnci sphatvtplf qttlglldkk kgeemiaasa vlkgtvlepe dfahaalyla
      241 sdeakfisgv nvpvdggynl snqswkmgfa alfg
//
LOCUS       XP_016714816             279 aa            linear   PLN 06-AUG-2024
DEFINITION  secoisolariciresinol dehydrogenase [Gossypium hirsutum].
ACCESSION   XP_016714816
VERSION     XP_016714816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859327.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="secoisolariciresinol dehydrogenase"
                     /calculated_mol_wt=29181
     Region          13..262
                     /region_name="secoisolariciresinol-DH_like_SDR_c"
                     /note="secoisolariciresinol dehydrogenase
                     (secoisolariciresinol-DH)-like, classical (c) SDRs;
                     cd05326"
                     /db_xref="CDD:187587"
     Site            order(23,26..28,47..48,70..72,98..101,122,149..151,165,
                     169,195..198)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187587"
     Site            order(75,107..109,111..113,116..117,120,124..125,128..129,
                     132,135..136,139,156..157,163,166..167,170..171,174..175,
                     177..179,181..182)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187587"
     Site            order(102..103,151..152,159..160,162,165,195..197,261)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187587"
     Site            order(123,151,165,169)
                     /site_type="active"
                     /db_xref="CDD:187587"
     CDS             1..279
                     /gene="LOC107928141"
                     /coded_by="XM_016859327.2:120..959"
                     /db_xref="GeneID:107928141"
ORIGIN      
        1 mstsssavst qkrlegkval itggaggige atarlfvqhg akvviadiqd dlgqaisqel
       61 geenisyvhc dvtldsdvgn avdfavskhg kldimfnnag isspdknivt snderfkrvl
      121 dinifggylg skhaarvmip akkgcilftt svwsvigsag vghayvtskh alvglaknlg
      181 velgqygirv ncisphgvat pmvtrpfgnm ekekveelia mgsnlkgvvl epedvaqaal
      241 ylasddakyv sglnmiidgg ysttnpslsn virslsseg
//
LOCUS       XP_016714815             545 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At5g37570
            [Gossypium hirsutum].
ACCESSION   XP_016714815
VERSION     XP_016714815.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859326.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="putative pentatricopeptide repeat-containing
                     protein At5g37570"
                     /calculated_mol_wt=60780
     Region          <14..545
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          74..101
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          146..171
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          175..202
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          204..233
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          235..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          266..295
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          342..366
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          370..397
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          403..433
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          439..465
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..545
                     /gene="LOC107928140"
                     /coded_by="XM_016859326.2:312..1949"
                     /db_xref="GeneID:107928140"
ORIGIN      
        1 mpislhhfph tlpslptllr scksqnqlhq ihahiikkgl hqdqylislc islstslsls
       61 tsifnsflqp stflwnclln gysknssffq tlslfirmks egglpdkyty plvikacsse
      121 vkawegkmlh glalksgcek difvgtslvg fyakikeiln akkvfdemse rnvvswtalv
      181 vghinvgdiv eakrvfdlmp ernvatwnal mgwwvktgdl vtarkvfdem pernvisytm
      241 midgyakagd masamflfeq aperdifaws amisgyeqng qpneavkmfi rmsemdvkpd
      301 kyilvslmsa csqvgslela mwvdgflsrs didvsqahvl aalidmnakc gnmaraaklf
      361 eempkrdlvs ycsmiqglai hgeeaqaiel fnrmiseglv pdevaftiil nacsgaglve
      421 egwhyfeimk neysmvptpd hyacmvdlls rtgrlkaayd liksmpveph agawgallga
      481 cklhcdvelg eltaarlhel eplnaanyvl lsdiyaaaeq wvnvsrlrnk mkerglrkvp
      541 gcswi
//
LOCUS       XP_016714801             511 aa            linear   PLN 06-AUG-2024
DEFINITION  lysosomal Pro-X carboxypeptidase [Gossypium hirsutum].
ACCESSION   XP_016714801
VERSION     XP_016714801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..511
                     /product="lysosomal Pro-X carboxypeptidase"
                     /calculated_mol_wt=57878
     Region          63..492
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..511
                     /gene="LOC107928126"
                     /coded_by="XM_016859312.2:162..1697"
                     /db_xref="GeneID:107928126"
ORIGIN      
        1 mrieanlilf fwafsifscl cfsvssvnfg yrfhssaika eqvqlprkss gtnklyktky
       61 ftqildhfnf npksyqkfqh rylindtywg gpkknspifv ytgnegdiew faqntgfmfd
      121 iaphfqallv fiehrfygks ipfggdkdva ysnastlgyl tstqaladya tliidlkknl
      181 tavdapvvvv ggsyggmlas wfrlkyphva igalassapi lnfenitspy sfnniitqdf
      241 rsesencykv ikgswkkied tgkqsgglel lrksfrickn fidvdvlesw letafaytam
      301 tdyptpsnfl npmpaypvkq mckaiddpks gndtfaklyg aasvyynysg tatcfnlays
      361 pdphgldmws wqactemimp tsgsnkesif penqwnysrr aagckafygv hprpnwitte
      421 fgghdiyrvl krygsnmiff nglrdpwsgg gvlkniskti vaivaeqgah hvdlrfatkd
      481 dpkwlrdvrq meiniisdwi sqyyhdlahq s
//
LOCUS       XP_016714835             284 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein At2g36080 [Gossypium hirsutum].
ACCESSION   XP_016714835
VERSION     XP_016714835.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714835.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..284
                     /product="B3 domain-containing protein At2g36080"
                     /calculated_mol_wt=31641
     Region          38..145
                     /region_name="B3"
                     /note="B3 DNA binding domain; pfam02362"
                     /db_xref="CDD:396783"
     Site            order(40,43,51,54,56,95,106,108..109,111..112)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..284
                     /gene="LOC107928165"
                     /coded_by="XM_016859346.2:307..1161"
                     /db_xref="GeneID:107928165"
ORIGIN      
        1 meptqsyqps msffsnipss hiedeyeqfd dhekepmfek pltpsdvgkl nrlvipkqha
       61 ekhfplggsg gdsvvdnkgl llsfedesgk cwrfrysywn ssqsyvltkg wsryvkekql
      121 dagdiilfkr hrlnaerlfi gwrrrgaald ggnaelgnns ggvrcgdngg wsssrglyqg
      181 npypghiqgq chganvpyqh dclhagsmae nqgpggnpkr llrlfgvnle chlddsseps
      241 tpdsssvssq gptsthhfys qsytsnymdi gfsrdmnqmn nhra
//
LOCUS       XP_016714840             420 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 8 [Gossypium hirsutum].
ACCESSION   XP_016714840
VERSION     XP_016714840.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859351.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714840.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..420
                     /product="protein trichome birefringence-like 8"
                     /calculated_mol_wt=48669
     Region          75..127
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          129..411
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..420
                     /gene="LOC107928172"
                     /coded_by="XM_016859351.2:72..1334"
                     /db_xref="GeneID:107928172"
ORIGIN      
        1 mdqlrtqtin qlpsgaalik relcyticfi filissiial nlgsssrslp lfrfdhffpr
       61 klpppfphth plracdysyg kwvrvdkknp vllydedcpf ldpgfrchrn grkdieflkw
      121 rwqphgcylp rfnasdfler srngrivfag dsmgrnqwes llcmlaqavl nkstifevng
      181 spitkhkgfl smkfqdynlt veyyrtpfla vlgrrpittp pqvklivkvd qlhwrskqwk
      241 ganvivlntg hwwnkekiak mgcyfqeggt inmtmdvmeg frrfiktlvs wttknlnpei
      301 shvfirnhsp ihymngtwdd ggvcdaatep eqdykklrpe swnnqyiana ikeinnskvr
      361 llnityltgf rkdghpskyr epgtpvgapq dcshwclpgi pdtwneilya qllsmefrtk
//
LOCUS       XP_016714818             164 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP18-2 [Gossypium hirsutum].
ACCESSION   XP_016714818
VERSION     XP_016714818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="peptidyl-prolyl cis-trans isomerase CYP18-2"
                     /calculated_mol_wt=17906
     Region          13..159
                     /region_name="cyclophilin"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; cl00197"
                     /db_xref="CDD:469651"
     Site            order(53,55,58..59,61,99..100,109,111,119..120,124)
                     /site_type="active"
                     /db_xref="CDD:238194"
     CDS             1..164
                     /gene="LOC107928143"
                     /coded_by="XM_016859329.2:94..588"
                     /db_xref="GeneID:107928143"
ORIGIN      
        1 mwasseggap evtletsmga ftvelyykha prtcrnfiel srrgyydnvk fhriikdfiv
       61 qggdptgtgk ggesiygpvf ddeirselkh tgagilsman agpnsngsqf fitlspapsl
      121 dgkhtifgrv crgmeiikrl gsvqtdnndr pihdvkilrt svkd
//
LOCUS       XP_016714872             927 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-N-acetylglucosamine--peptide
            N-acetylglucosaminyltransferase SPINDLY [Gossypium hirsutum].
ACCESSION   XP_016714872
VERSION     XP_016714872.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714872.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="probable UDP-N-acetylglucosamine--peptide
                     N-acetylglucosaminyltransferase SPINDLY"
                     /calculated_mol_wt=102920
     Site            order(51..52,55..56,58,82,85..86,89..90,92..93,116,
                     119..120,123..124,127)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          51..75
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          54..>148
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          80..110
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          108..326
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          115..143
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          156..184
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(157,160..161,164..165,167,191,194..195,198..199,
                     201..202,225,228..229,232..233,236)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          189..219
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          224..252
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          234..849
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          258..292
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          299..327
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          333..361
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(334,337..338,341..342,344,368,371..372,375..376,
                     378..379,402,405..406,409..410,413)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          366..396
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          401..429
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..927
                     /gene="LOC107928200"
                     /coded_by="XM_016859383.2:441..3224"
                     /db_xref="GeneID:107928200"
ORIGIN      
        1 mawtekdvig rekdliaeng flkdrqsspg pststvdvip ppkafegkda lsyanilrsr
       61 nkfvdalaiy nnvlekdsgc veayigkgic lqmqnmgrpa fesfaeaikl dpqnacalth
      121 cgilykdegr lvdaaesyqk alkadasykp aaeclaivlt dlgtslklag ntqegiqkyy
      181 ealkidphya payynlgvvy semmqydtal scyekaaler pmyaeaycnm gviyknrgdl
      241 esaiacyerc lavspnfeia knnmaialtd lgtkvklegd inqgvayykk alyynwhyad
      301 amynlgvayg emlkfdmavv fyelafhfnp hcaeacnnlg viykdrdnld kavecyqlal
      361 sikpnfsqsl nnlgvvytvq gkmdaaasmi ekaiianpty aeaynnlgvl yrdagnitma
      421 vtayeqclki dpdsrnagqn rllamnyine gdddklfeah rdwgrrfmrl ypqydswdnp
      481 kdperplvig yispdyfths vsyfieapli yhdygkyqvv vysavvkada ktnrfrervv
      541 kkgglwrdiy gidekkvasm irddkidilv eltghtannk lgtmacrpap vqvtwigypn
      601 ttglptidyr itdsladppg tkqkhveelv rlpecflcyt psseaglvsp tpalsngfit
      661 fgsfnnlaki tpkvlqvwar ilcavpnsrl vvkckpfccd svrqkflttl eqlgleslrv
      721 dllplillnh dhmqayslmd isldtfpyag ttttceslym gvpcvtmags vhahnvgvsl
      781 lskvglghli aknedeyvql alqlasdvta lqnlraslrd lmskspvcdg qnfisgleat
      841 yrgmwrryck gdvpssryme mlkkegvpeg vtnetskper vtmskdtssv svesngfnqa
      901 plstpnltts ednenqssqt tnsgkls
//
LOCUS       XP_016714873             927 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-N-acetylglucosamine--peptide
            N-acetylglucosaminyltransferase SPINDLY [Gossypium hirsutum].
ACCESSION   XP_016714873
VERSION     XP_016714873.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714873.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="probable UDP-N-acetylglucosamine--peptide
                     N-acetylglucosaminyltransferase SPINDLY"
                     /calculated_mol_wt=102920
     Site            order(51..52,55..56,58,82,85..86,89..90,92..93,116,
                     119..120,123..124,127)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          51..75
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          54..>148
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          80..110
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          108..326
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          115..143
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          156..184
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(157,160..161,164..165,167,191,194..195,198..199,
                     201..202,225,228..229,232..233,236)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          189..219
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          224..252
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          234..849
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          258..292
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          299..327
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          333..361
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(334,337..338,341..342,344,368,371..372,375..376,
                     378..379,402,405..406,409..410,413)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          366..396
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          401..429
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..927
                     /gene="LOC107928200"
                     /coded_by="XM_016859384.2:429..3212"
                     /db_xref="GeneID:107928200"
ORIGIN      
        1 mawtekdvig rekdliaeng flkdrqsspg pststvdvip ppkafegkda lsyanilrsr
       61 nkfvdalaiy nnvlekdsgc veayigkgic lqmqnmgrpa fesfaeaikl dpqnacalth
      121 cgilykdegr lvdaaesyqk alkadasykp aaeclaivlt dlgtslklag ntqegiqkyy
      181 ealkidphya payynlgvvy semmqydtal scyekaaler pmyaeaycnm gviyknrgdl
      241 esaiacyerc lavspnfeia knnmaialtd lgtkvklegd inqgvayykk alyynwhyad
      301 amynlgvayg emlkfdmavv fyelafhfnp hcaeacnnlg viykdrdnld kavecyqlal
      361 sikpnfsqsl nnlgvvytvq gkmdaaasmi ekaiianpty aeaynnlgvl yrdagnitma
      421 vtayeqclki dpdsrnagqn rllamnyine gdddklfeah rdwgrrfmrl ypqydswdnp
      481 kdperplvig yispdyfths vsyfieapli yhdygkyqvv vysavvkada ktnrfrervv
      541 kkgglwrdiy gidekkvasm irddkidilv eltghtannk lgtmacrpap vqvtwigypn
      601 ttglptidyr itdsladppg tkqkhveelv rlpecflcyt psseaglvsp tpalsngfit
      661 fgsfnnlaki tpkvlqvwar ilcavpnsrl vvkckpfccd svrqkflttl eqlgleslrv
      721 dllplillnh dhmqayslmd isldtfpyag ttttceslym gvpcvtmags vhahnvgvsl
      781 lskvglghli aknedeyvql alqlasdvta lqnlraslrd lmskspvcdg qnfisgleat
      841 yrgmwrryck gdvpssryme mlkkegvpeg vtnetskper vtmskdtssv svesngfnqa
      901 plstpnltts ednenqssqt tnsgkls
//
LOCUS       XP_040943557             927 aa            linear   PLN 06-AUG-2024
DEFINITION  probable UDP-N-acetylglucosamine--peptide
            N-acetylglucosaminyltransferase SPINDLY [Gossypium hirsutum].
ACCESSION   XP_040943557
VERSION     XP_040943557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087623.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..927
                     /product="probable UDP-N-acetylglucosamine--peptide
                     N-acetylglucosaminyltransferase SPINDLY"
                     /calculated_mol_wt=102920
     Site            order(51..52,55..56,58,82,85..86,89..90,92..93,116,
                     119..120,123..124,127)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          51..75
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          54..>148
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          80..110
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          108..326
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          115..143
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          156..184
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(157,160..161,164..165,167,191,194..195,198..199,
                     201..202,225,228..229,232..233,236)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          189..219
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          224..252
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          234..849
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          258..292
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          299..327
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          333..361
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(334,337..338,341..342,344,368,371..372,375..376,
                     378..379,402,405..406,409..410,413)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          366..396
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          401..429
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..927
                     /gene="LOC107928200"
                     /coded_by="XM_041087623.1:85..2868"
                     /db_xref="GeneID:107928200"
ORIGIN      
        1 mawtekdvig rekdliaeng flkdrqsspg pststvdvip ppkafegkda lsyanilrsr
       61 nkfvdalaiy nnvlekdsgc veayigkgic lqmqnmgrpa fesfaeaikl dpqnacalth
      121 cgilykdegr lvdaaesyqk alkadasykp aaeclaivlt dlgtslklag ntqegiqkyy
      181 ealkidphya payynlgvvy semmqydtal scyekaaler pmyaeaycnm gviyknrgdl
      241 esaiacyerc lavspnfeia knnmaialtd lgtkvklegd inqgvayykk alyynwhyad
      301 amynlgvayg emlkfdmavv fyelafhfnp hcaeacnnlg viykdrdnld kavecyqlal
      361 sikpnfsqsl nnlgvvytvq gkmdaaasmi ekaiianpty aeaynnlgvl yrdagnitma
      421 vtayeqclki dpdsrnagqn rllamnyine gdddklfeah rdwgrrfmrl ypqydswdnp
      481 kdperplvig yispdyfths vsyfieapli yhdygkyqvv vysavvkada ktnrfrervv
      541 kkgglwrdiy gidekkvasm irddkidilv eltghtannk lgtmacrpap vqvtwigypn
      601 ttglptidyr itdsladppg tkqkhveelv rlpecflcyt psseaglvsp tpalsngfit
      661 fgsfnnlaki tpkvlqvwar ilcavpnsrl vvkckpfccd svrqkflttl eqlgleslrv
      721 dllplillnh dhmqayslmd isldtfpyag ttttceslym gvpcvtmags vhahnvgvsl
      781 lskvglghli aknedeyvql alqlasdvta lqnlraslrd lmskspvcdg qnfisgleat
      841 yrgmwrryck gdvpssryme mlkkegvpeg vtnetskper vtmskdtssv svesngfnqa
      901 plstpnltts ednenqssqt tnsgkls
//
LOCUS       XP_016714795             451 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-fructofuranosidase, insoluble isoenzyme 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016714795
VERSION     XP_016714795.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859306.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714795.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="beta-fructofuranosidase, insoluble isoenzyme 1
                     isoform X1"
                     /calculated_mol_wt=51234
     Region          2..424
                     /region_name="Glyco_32"
                     /note="Glycosyl hydrolases family 32; smart00640"
                     /db_xref="CDD:214757"
     CDS             1..451
                     /gene="LOC107928122"
                     /coded_by="XM_016859306.2:105..1460"
                     /db_xref="GeneID:107928122"
ORIGIN      
        1 mnwindpngp myyngiyhlf yqynpkgavw gnivwahses kdmvnweale paiypsesfd
       61 ingcwsgsat vlpenkpvif ytgidpnqyq vqnyavpenl sdpylrkwvk padnpivvad
      121 etmnktafrd pttawkiggh wrmvvasrrk qrgiaylyrs rgfrkwvkak hplhsvpntg
      181 mfecadffpv slsgdtgldn safgpnvkhv lkvsldltry eyytigsyfp eardkyvvgk
      241 gfvdgwnglr fdygnfyask tffdpsknrr ilwgwtnesd taqddvqkgw aglqaiprkv
      301 wldpsgkqll qwpieeietl rgqnvqlsnq elksgehiev kaitaaqadv ditfsipnld
      361 kaepfdpswt naqdlcglkg stvqggvgpf glltlasekl eeytpvffrv ftglykhvvl
      421 lcsdsgrlit rwwrvsgpge khaslreyih w
//
LOCUS       XP_016714796             519 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-fructofuranosidase, insoluble isoenzyme 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016714796
VERSION     XP_016714796.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859307.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714796.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..519
                     /product="beta-fructofuranosidase, insoluble isoenzyme 1
                     isoform X2"
                     /calculated_mol_wt=58322
     Region          2..472
                     /region_name="Glyco_32"
                     /note="Glycosyl hydrolases family 32; smart00640"
                     /db_xref="CDD:214757"
     CDS             1..519
                     /gene="LOC107928122"
                     /coded_by="XM_016859307.2:115..1674"
                     /db_xref="GeneID:107928122"
ORIGIN      
        1 mnwindpngp myyngiyhlf yqynpkgavw gnivwahses kdmvnweale paiypsesfd
       61 ingcwsgsat vlpenkpvif ytgidpnqyq vqnyavpenl sdpylrkwvk padnpivvad
      121 etmnktafrd pttawkiggh wrmvvasrrk qrgiaylyrs rgfrkwvkak hplhsvpntg
      181 mfecadffpv slsgdtgldn safgpnvkhv lkvsldltry eyytigsyfp eardkyvvgk
      241 gfvdgwnglr fdygnfyask tffdpsknrr ilwgwtnesd taqddvqkgw aglqaiprkv
      301 wldpsgkqll qwpieeietl rgqnvqlsnq elksgehiev kaitaaqadv ditfsipnld
      361 kaepfdpswt naqdlcglkg stvqggvgpf glltlasekl eeytpvffrv ftglykhvvl
      421 lcsdsgsssl rkeglykpsf agfvdvdldd tykislrtli dhsvvesfga ggktcitsrv
      481 yplvavfdda hlfvfnngte titadveaws makpdkmnn
//
LOCUS       XP_040943558            1010 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-5C [Gossypium hirsutum].
ACCESSION   XP_040943558
VERSION     XP_040943558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087624.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1010
                     /product="kinesin-like protein KIN-5C"
                     /calculated_mol_wt=113245
     Region          10..368
                     /region_name="KISc_BimC_Eg5"
                     /note="Kinesin motor domain, BimC/Eg5 spindle pole
                     proteins; cd01364"
                     /db_xref="CDD:276815"
     Site            order(20,98,101,103..106,265)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276815"
     Site            order(312,315,318)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276815"
     Region          <402..>942
                     /region_name="235kDa-fam"
                     /note="reticulocyte binding/rhoptry protein; TIGR01612"
                     /db_xref="CDD:130673"
     CDS             1..1010
                     /gene="LOC107928219"
                     /coded_by="XM_041087624.1:216..3248"
                     /db_xref="GeneID:107928219"
ORIGIN      
        1 msgrherekg vnvqvllrcr pfsedelrnn apqvvtcnef qrevavsqni agkhidrvft
       61 fdkvfgptaq qkdlyeqavv pivnevlegf nctifaygqt gtgktytmeg eckrgkaghn
      121 gelpadagvi pravqqifdt legqnaeysv kvtflelyne eitdllapee iskvvleekq
      181 kktlplmedg kggvlvrgle eeivttssei ftllergsak rrtaetllnk qssrshslfs
      241 itihikeatp egeelikcgk lnlvdlagse nisrsgardg rareageink slltlgrvis
      301 alvehlghvp yrdskltrll rdslggrtkt ciiatvspav hcleetlstl dyahrakhik
      361 nkpevnqkmm kstlikdlyg eierlkgevy aarekngvyv pkeryyqees erkamadqie
      421 kmgvllenhq kqleelqdky vaqvrqcsdl sgklektekn lnetskllvn seeelkkcry
      481 vlkekefiis qqkqaenala hqacalrsdl ekavkdnall flkigredkl nadnrvvvnn
      541 yqvelaqqig sicnlvsslm sqqnehlesv eklccsftdt hqkaildmkk kvtaartlhv
      601 sqmeavqniv rlhkgssnaa ldeistlaas nahsieeflk seagkaasif ndlqgtlath
      661 qgemalfare lrqrfhasie qtknisdytn gildklsees vkvqnhavqa devqmksias
      721 fqkvyeeqsk sdsekliadm tnlvynhvrr qkelvdarlv diresamank tfldghvssm
      781 vgittdakrk wqefvmqaen dakdssdysa akhcrmeall qqcvstaesa fkhskdaqes
      841 vnemahkhvs dmaslirnas naneqhdaei dcarisaeqd slkntddtlk yidsmseqeh
      901 giksrildsv kahgktlkif hddhssqats ikqraeetfq qtymdyepsa ttpirseqdv
      961 ptkgtieslr ampmealiee frennsyesf epkllkssvi ptrspltein
//
LOCUS       XP_016714896              80 aa            linear   PLN 06-AUG-2024
DEFINITION  probable small nuclear ribonucleoprotein G [Gossypium hirsutum].
ACCESSION   XP_016714896
VERSION     XP_016714896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859407.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..80
                     /product="probable small nuclear ribonucleoprotein G"
                     /calculated_mol_wt=8773
     Region          6..74
                     /region_name="Sm_G"
                     /note="Sm protein G; cd01719"
                     /db_xref="CDD:212466"
     Site            order(9,13,21,26,39,59,61..62,64,67..71,73)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212466"
     Site            order(18..24,26..38,40..44)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212466"
     Site            order(38,40,63,65)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212466"
     Site            59..70
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212466"
     CDS             1..80
                     /gene="LOC107928220"
                     /coded_by="XM_016859407.2:160..402"
                     /db_xref="GeneID:107928220"
ORIGIN      
        1 msrsgqppdl kkymdkklqi klnanrlvvg tlrgfdqfmn lvvdntvevn gnektdigmv
       61 virgnsvvtv ealepvgrmq
//
LOCUS       XP_016714900             449 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein 5 [Gossypium hirsutum].
ACCESSION   XP_016714900
VERSION     XP_016714900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859411.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..449
                     /product="rho GTPase-activating protein 5"
                     /calculated_mol_wt=49253
     Region          88..128
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(90,93,96,98,101,117,121)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     Region          150..308
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein for Rho-like GTPases;
                     smart00324"
                     /db_xref="CDD:214618"
     Site            order(175,209,213,275,278..279,301)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            175
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..449
                     /gene="LOC107928225"
                     /coded_by="XM_016859411.2:381..1730"
                     /db_xref="GeneID:107928225"
ORIGIN      
        1 mtevlqssss hfssssspts tqhglintsm siiaqgsdrg eenrqvgerr grdkggeqql
       61 plvtilvtaf rksvigcsis gskelcamei glptnvkhva hvtfdrfhgf lglpvefepe
      121 vprkapsasa nvfgvstesm qlsfdcrgns vptilllmqr hlydkgglqa egifrinaen
      181 sqeeyvreql nrgvipdgid vhclaglika wfrelpsgvl dslppelvik sqseeecarl
      241 vrllppteaa lldwtinlma dvvelehlnk mnarnvamvf apnmtqlsdp ltalmhavqv
      301 mnflktliir tlkarqdsmv dstsnfplep sdkngpqsss qlcndvntev knecegeksf
      361 vptternsqs lasienisag nrslvdnrpc imvsregslr sssesvkkgs kkanersmad
      421 resgleeksk gtrivnrvns raelceawr
//
LOCUS       XP_040943559             320 aa            linear   PLN 06-AUG-2024
DEFINITION  4'-phosphopantetheinyl transferase HetI [Gossypium hirsutum].
ACCESSION   XP_040943559
VERSION     XP_040943559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087625.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..320
                     /product="4'-phosphopantetheinyl transferase HetI"
                     /calculated_mol_wt=36169
     Region          25..221
                     /region_name="Sfp"
                     /note="Phosphopantetheinyl transferase [Coenzyme transport
                     and metabolism]; COG2091"
                     /db_xref="CDD:441694"
     CDS             1..320
                     /gene="LOC107928157"
                     /coded_by="XM_041087625.1:84..1046"
                     /db_xref="GeneID:107928157"
ORIGIN      
        1 mklnlkmnir ccqrnfssal pplvpiqlps prethfwyil pdevksvall nrysellspc
       61 erenvnrmsg dqlkkralla ralvrttiar yqtnceinpr slkfrkniyg kpevewhkdd
      121 nfsppplhfn ishtpsmiac gvtinapigi dveekqrklk ndiiafaqry fspyevkllt
      181 sisdpevrrq efiklwtlke ayvkalgkgf sampfktfti qfrtstlrcf hlpgnsvska
      241 sevivessnd pgnltnnclf allevagshy aaicvendei vrgesntpmk ltvrktipfv
      301 edvcvsgtda vlplrgiieq
//
LOCUS       XP_040943560             225 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943560
VERSION     XP_040943560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087626.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..225
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25325
     Region          <123..>173
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
     CDS             1..225
                     /gene="LOC107928125"
                     /coded_by="XM_041087626.1:629..1306"
                     /db_xref="GeneID:107928125"
ORIGIN      
        1 mmqihvqssf arfmcsqgyd twiielrgag lstqgmdfgq yidpldsisq rkdfygkgtd
       61 ykrfsktekr yafssqitdl ieklvniiee aersspvraf dmqnsistal kdmqkqldli
      121 skydwdfdny leedvpavme yikdksepkd gkllaighsm gsillyamls rcgyegkdsg
      181 laavttlass ldymssrssl klllplavdl vypciiefln hhdaa
//
LOCUS       XP_016714889             476 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein Q [Gossypium hirsutum].
ACCESSION   XP_016714889
VERSION     XP_016714889.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859400.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714889.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="heterogeneous nuclear ribonucleoprotein Q"
                     /calculated_mol_wt=52729
     Region          98..>360
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     CDS             1..476
                     /gene="LOC107928214"
                     /coded_by="XM_016859400.2:482..1912"
                     /db_xref="GeneID:107928214"
ORIGIN      
        1 mprtreeiee qvdldgdndp eetieeevey eeieeeeeve veeeveeeve veeeeeeded
       61 edaelvdfqk gsdanegmdd feteeekkkk haellalpph gsevylggip hdasdedlrr
      121 fcesigevie vrimkekdsg eakgyafvtf rskelaskai enlngsefkg kkikcstsqa
      181 knklfignvp rnwgeedvkk vvkdvgpgvn siellkdpmn psrnrgfvfi eyynhacaey
      241 srqkmmkptf klddnaptvs wadprsaesf sntqvkalyv knlpkditqd rlrklfehhg
      301 kilkvvvppa kvgkensryg fvhfaerssa mkalknteky eiddhvlecs lakpqadqks
      361 gasgsqklsl dssfppllgy glvggayggl gtgfgpagfg qpliygqgpt pagmammpml
      421 lpdgrigyvl qqpgvqphtp ppqphssrgg asgssssggr rssndssrgr rrynpy
//
LOCUS       XP_016714887             476 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein Q [Gossypium hirsutum].
ACCESSION   XP_016714887
VERSION     XP_016714887.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859398.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714887.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="heterogeneous nuclear ribonucleoprotein Q"
                     /calculated_mol_wt=52729
     Region          98..>360
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     CDS             1..476
                     /gene="LOC107928214"
                     /coded_by="XM_016859398.2:150..1580"
                     /db_xref="GeneID:107928214"
ORIGIN      
        1 mprtreeiee qvdldgdndp eetieeevey eeieeeeeve veeeveeeve veeeeeeded
       61 edaelvdfqk gsdanegmdd feteeekkkk haellalpph gsevylggip hdasdedlrr
      121 fcesigevie vrimkekdsg eakgyafvtf rskelaskai enlngsefkg kkikcstsqa
      181 knklfignvp rnwgeedvkk vvkdvgpgvn siellkdpmn psrnrgfvfi eyynhacaey
      241 srqkmmkptf klddnaptvs wadprsaesf sntqvkalyv knlpkditqd rlrklfehhg
      301 kilkvvvppa kvgkensryg fvhfaerssa mkalknteky eiddhvlecs lakpqadqks
      361 gasgsqklsl dssfppllgy glvggayggl gtgfgpagfg qpliygqgpt pagmammpml
      421 lpdgrigyvl qqpgvqphtp ppqphssrgg asgssssggr rssndssrgr rrynpy
//
LOCUS       XP_040943561             476 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein Q [Gossypium hirsutum].
ACCESSION   XP_040943561
VERSION     XP_040943561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087627.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="heterogeneous nuclear ribonucleoprotein Q"
                     /calculated_mol_wt=52729
     Region          98..>360
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     CDS             1..476
                     /gene="LOC107928214"
                     /coded_by="XM_041087627.1:820..2250"
                     /db_xref="GeneID:107928214"
ORIGIN      
        1 mprtreeiee qvdldgdndp eetieeevey eeieeeeeve veeeveeeve veeeeeeded
       61 edaelvdfqk gsdanegmdd feteeekkkk haellalpph gsevylggip hdasdedlrr
      121 fcesigevie vrimkekdsg eakgyafvtf rskelaskai enlngsefkg kkikcstsqa
      181 knklfignvp rnwgeedvkk vvkdvgpgvn siellkdpmn psrnrgfvfi eyynhacaey
      241 srqkmmkptf klddnaptvs wadprsaesf sntqvkalyv knlpkditqd rlrklfehhg
      301 kilkvvvppa kvgkensryg fvhfaerssa mkalknteky eiddhvlecs lakpqadqks
      361 gasgsqklsl dssfppllgy glvggayggl gtgfgpagfg qpliygqgpt pagmammpml
      421 lpdgrigyvl qqpgvqphtp ppqphssrgg asgssssggr rssndssrgr rrynpy
//
LOCUS       XP_016714892             374 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g57790 [Gossypium hirsutum].
ACCESSION   XP_016714892
VERSION     XP_016714892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859403.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..374
                     /product="F-box/kelch-repeat protein At1g57790"
                     /calculated_mol_wt=43744
     Region          35..>69
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     CDS             1..374
                     /gene="LOC107928216"
                     /coded_by="XM_016859403.2:116..1240"
                     /db_xref="GeneID:107928216"
ORIGIN      
        1 maerkrrklk llaetinlde kkateeeesl klqtwadlpv ellelilcrl tlednvrasa
       61 vcrrwhkvav avrvvnqspw lmyfpkygsl yefydpaerk tyslelpelq gsracytkdg
      121 wlllyrprnh gvfffnpfnr hmiklprfel tyqmvafsda ptsdlcvvft ikhisptvva
      181 istcrpgdse wttvnhqnrl pfvssiwnkm vfcsgmfycl sltgwlgvyd pllrawsvlh
      241 vppprcpenf faknwwkgkf maehdgdilv iytcntetpi ifkldhsemv weemqtlngv
      301 tlfasflssh srtelpgamr nvvyfskvrf fgkrcisysv ddrryyprke chdwgeqdpf
      361 eniwiepprd asln
//
LOCUS       XP_016733653             156 aa            linear   PLN 06-AUG-2024
DEFINITION  cytosolic isocitrate dehydrogenase [NADP] [Gossypium hirsutum].
ACCESSION   XP_016733653
VERSION     XP_016733653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016878164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..156
                     /product="cytosolic isocitrate dehydrogenase [NADP]"
                     /calculated_mol_wt=16749
     Region          <1..155
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
     CDS             1..156
                     /gene="LOC107944342"
                     /coded_by="XM_016878164.2:96..566"
                     /db_xref="GeneID:107944342"
ORIGIN      
        1 mvayalkseg gyvwacknyd gdvqsdflaq gfgslglmts vlvcpdgkti eaeaahgtvt
       61 rhfrvhqkgg etstnsiasi fawtrglahr aklddnpkll dftekleaac igtvesgkmt
      121 kdlaliihgs klardkylnt eefidavaad lkarls
//
LOCUS       XP_016714908             279 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714908
VERSION     XP_016714908.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859419.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30730
     CDS             1..279
                     /gene="LOC107928230"
                     /coded_by="XM_016859419.2:163..1002"
                     /db_xref="GeneID:107928230"
ORIGIN      
        1 mpqgnletlv sacacgscdn kivcetlttt eghyddclht aeklleeetp pdfppesfll
       61 skdaelvwfd snaflerkds qkrnsvsnst nlnpnlnsvp nsqrfslrks kasilglpkp
      121 qkscfvetkn rkpgntrlfp krsgsvksdp pviepsspkv scmgrvrskr drnrrlkknr
      181 qksagtetvk kkttrtgsgf fssfraifrc nskareshal pltlspprds dirsrlpphd
      241 gddvlnvape iaesgpvaep vslggmkrfs sgrrsetli
//
LOCUS       XP_016714802             342 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714802
VERSION     XP_016714802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..342
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37627
     Region          145..222
                     /region_name="GST_N_2GST_N"
                     /note="GST_N family, 2 repeats of the N-terminal domain of
                     soluble GSTs (2 GST_N) subfamily; composed of
                     uncharacterized proteins. GSTs are cytosolic dimeric
                     proteins involved in cellular detoxification by catalyzing
                     the conjugation of glutathione (GSH) with a...; cd03041"
                     /db_xref="CDD:239339"
     Site            order(156,158..159,161..162,165..166,212,215..216)
                     /site_type="other"
                     /note="putative C-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239339"
     Site            order(156,195..197,210..211)
                     /site_type="other"
                     /note="putative GSH binding site (G-site) [chemical
                     binding]"
                     /db_xref="CDD:239339"
     Site            order(195,209..210,212..213,216)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239339"
     Region          264..340
                     /region_name="GST_N_2GST_N"
                     /note="GST_N family, 2 repeats of the N-terminal domain of
                     soluble GSTs (2 GST_N) subfamily; composed of
                     uncharacterized proteins. GSTs are cytosolic dimeric
                     proteins involved in cellular detoxification by catalyzing
                     the conjugation of glutathione (GSH) with a...; cd03041"
                     /db_xref="CDD:239339"
     Site            order(275,277..278,280..281,284..285,330,333..334)
                     /site_type="other"
                     /note="putative C-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239339"
     Site            order(275,313..315,328..329)
                     /site_type="other"
                     /note="putative GSH binding site (G-site) [chemical
                     binding]"
                     /db_xref="CDD:239339"
     Site            order(313,327..328,330..331,334)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239339"
     CDS             1..342
                     /gene="LOC107928127"
                     /coded_by="XM_016859313.2:174..1202"
                     /db_xref="GeneID:107928127"
ORIGIN      
        1 mavagilnip klplfsslpl rkqsrplsis ikasnsqtst keeenpsfss sssssstttt
       61 attfapppnf kppepkrfai rpdktwdivg aslalffrlg tgvfvsgysa slvsekeipp
      121 gqyslelggs kvketskigp rpekpieiye fegcpfcrkv reivavldid vlfypcpkng
      181 pnfrpkvaqm ggkqqfpymv dpntgvamye sddiikylve kygdgsvpfm lslgllttlt
      241 agfamigrmg rgnsytpskl ppkpleiwsy egspfckivr evlvelelph tqrscargsp
      301 krqilyekag hfqvpyledp ntgvqmfesa eiveylraty aq
//
LOCUS       XP_016714837             159 aa            linear   PLN 06-AUG-2024
DEFINITION  iron-sulfur assembly protein IscA-like 2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016714837
VERSION     XP_016714837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859348.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..159
                     /product="iron-sulfur assembly protein IscA-like 2,
                     mitochondrial"
                     /calculated_mol_wt=17614
     Region          1..158
                     /region_name="Fe-S_biosyn"
                     /note="Iron-sulphur cluster biosynthesis; cl00400"
                     /db_xref="CDD:444888"
     CDS             1..159
                     /gene="LOC107928167"
                     /coded_by="XM_016859348.2:17..496"
                     /db_xref="GeneID:107928167"
ORIGIN      
        1 msrslirrfc pifiarikqn hkilksslys ssssalhevs sesspsldai hmtdncvkri
       61 eelqaskels eekmlrlsve tggcsgfqyv fdlddktnqd drvferggvk livdnisydf
      121 vkgatvdyie elirsaflvt tnpsavggcs ckssfmvkq
//
LOCUS       XP_016714898             350 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CIA1 [Gossypium hirsutum].
ACCESSION   XP_016714898
VERSION     XP_016714898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859409.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="protein CIA1"
                     /calculated_mol_wt=38720
     Region          12..345
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(19,43,47,53,58,70,72,90,94,100..101,115..116,133,
                     138,144..145,161,178,183,189,193,210..211,229,233,
                     239..240,263,265,281,286,292,297,314..315,334,338,
                     344..345)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          23..70
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          77..115
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          120..159
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          166..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..262
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..313
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          319..344
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..350
                     /gene="LOC107928223"
                     /coded_by="XM_016859409.2:244..1296"
                     /db_xref="GeneID:107928223"
ORIGIN      
        1 melldgnlel keiqklqght drvwslawnp ataaadvpkv fascsgdktv riweespstr
       61 swdckavlee thsrtvrsca wspsgrllat asfdattaiw envggdfecv stleghenev
      121 ksvswnasgs llatcgrdkt vwiwevmpgn efeciqvlqg htqdvkmvew hptmdilfsc
      181 sydntvkvww sddadgdwsc vqtlgessng hsstvwslaf nakgdklvtc sddltmkiwe
      241 adiirmqsgd gyapwnhlct lsgyhdrtif svhwsregii asgaaddavr lfveskdgsm
      301 ngssyqlllk kekahdmdvn svqwcpgekr llasasddgt ikiwelgtlp
//
LOCUS       XP_040943562              72 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b-c1 complex subunit 9, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040943562
VERSION     XP_040943562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087628.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..72
                     /product="cytochrome b-c1 complex subunit 9,
                     mitochondrial"
                     /calculated_mol_wt=8220
     Region          17..62
                     /region_name="UCR_UQCRX_QCR9"
                     /note="Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like;
                     pfam05365"
                     /db_xref="CDD:461632"
     CDS             1..72
                     /gene="LOC107928139"
                     /coded_by="XM_041087628.1:368..586"
                     /db_xref="GeneID:107928139"
ORIGIN      
        1 mdyasrrsqg glfeglyrvi mrrnsvyvtf viagaflger avdygvhklw eynnvgkryk
       61 disvlgqrqs ee
//
LOCUS       XP_016714834             134 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BIC1 [Gossypium hirsutum].
ACCESSION   XP_016714834
VERSION     XP_016714834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..134
                     /product="protein BIC1"
                     /calculated_mol_wt=14961
     Region          64..121
                     /region_name="BIC1_CID"
                     /note="CRY-interacting domain (CID) of protein BIC1 and
                     similar proteins; cd22645"
                     /db_xref="CDD:439350"
     Site            order(65,67..68,71..73,75,78..80,82..86,88..89,92..93,95,
                     101,104..106,110,112..114,116..118,120..121)
                     /site_type="other"
                     /note="CRY binding site [polypeptide binding]"
                     /db_xref="CDD:439350"
     CDS             1..134
                     /gene="LOC107928164"
                     /coded_by="XM_016859345.2:219..623"
                     /db_xref="GeneID:107928164"
ORIGIN      
        1 mnieptkmta thyqnpsqfl eqanetqqpd eesslkgrcs arvdevakeg tvrgveklte
       61 edngrerlkk hriemgkskv wipdiwgqee llkdwidcsg fddclvpsgi mlarealvae
      121 grtgsggvri enrc
//
LOCUS       XP_016714882             695 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g33170 [Gossypium
            hirsutum].
ACCESSION   XP_016714882
VERSION     XP_016714882.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714882.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..695
                     /product="pentatricopeptide repeat-containing protein
                     At4g33170"
                     /calculated_mol_wt=77480
     Region          25..48
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <35..693
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          58..83
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          87..114
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          120..149
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          155..184
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          186..215
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          260..283
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          290..317
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..352
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          362..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          391..418
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          424..454
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          460..486
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..695
                     /gene="LOC107928209"
                     /coded_by="XM_016859393.2:94..2181"
                     /db_xref="GeneID:107928209"
ORIGIN      
        1 mnfqkpctfa klmprlkdsk slakiiqnla qtrqllqgkq lhsqlissgy plctfltnhl
       61 lnmyskcgql dysvklfdkm sqrnlvswta mvtgfsqnlh yfeaistfce mriagenptq
      121 fafssvikac asvglvefge eihclalkfg fgsdifvvsn lvdmyskcgv mvnaynvfqe
      181 meckdevlwt alidgyakng pfedalsayk nmvkegigid kfvlcstlaa caalkalnfg
      241 kclhsvmlkk gfeleisvgn altdmyskvg dmesasnvfg idsdcrniva csslidgyve
      301 mdrikdalsv yvrlrrqgie pneftfssli kacssqatle qgtqlhaevi kfnfdcnpfv
      361 ssvlvdmygk cgllddsirv fdeienatef awnsmlsvfa qhglgkdaiq lfnrmknegv
      421 epnaitfvsl lrgcshsglv eeglsffkam ekiygvvpre ehyscvidll gragqlkeae
      481 dfinkmpfet nafgwcsflg ackihgdker gklaaeklmq lepensgapv llsniyakeq
      541 qwedvrtlrk mmqdfnvkkl pgyswvdvgn kthifgvedw shpqmkaiyd klnalsgqik
      601 vagyvpctds ipldvdvsvk ekilqhhser laiafalisi psgkpiivkk nlrvcsdchs
      661 aikyiskvig rkiivrdnsr fhhfsnglcs cgdfw
//
LOCUS       XP_016714883             473 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division protein FtsZ homolog 2-1, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016714883
VERSION     XP_016714883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..473
                     /product="cell division protein FtsZ homolog 2-1,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=49681
     Region          129..463
                     /region_name="FtsZ"
                     /note="Cell division GTPase FtsZ [Cell cycle control, cell
                     division, chromosome partitioning]; COG0206"
                     /db_xref="CDD:439976"
     CDS             1..473
                     /gene="LOC107928210"
                     /coded_by="XM_016859394.2:603..2024"
                     /db_xref="GeneID:107928210"
ORIGIN      
        1 matasdirpm gvlnvlggrv llenptgrls clklcdgkig fssaglrsim phlrcstnsh
       61 gvslyqnkdr flnlhhevpm lrgegnkmit nprkesssgs vteilgdmng snnnneakik
      121 vigvggggsn avnrmiesem qgvefwivnt dvqamkmspi fperrlqigq eltrglgagg
      181 npeigmnaak eskesieeal ygadmvfvta gmgggtgtgg apviaglaks mgiltvgiat
      241 tpfsfegrrr tvqaqegiaa lrenvdtliv ipndklltav spstpvteaf nladdilrqg
      301 vrgisdiiti pglvnvdfad vrtimanags slmgigtatg ktrardaaln aiqsplldlg
      361 ieratgivwn itggsdltlf evnaaaeviy dlvdpaanli fgavidpsls gqvsitliat
      421 gfknqegers qagrltqgdt glginrrppf seggsvdipe flkkkghsry pra
//
LOCUS       XP_016714884             430 aa            linear   PLN 06-AUG-2024
DEFINITION  cell division protein FtsZ homolog 2-1, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016714884
VERSION     XP_016714884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..430
                     /product="cell division protein FtsZ homolog 2-1,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=45027
     Region          129..412
                     /region_name="FtsZ"
                     /note="Cell division GTPase FtsZ [Cell cycle control, cell
                     division, chromosome partitioning]; COG0206"
                     /db_xref="CDD:439976"
     CDS             1..430
                     /gene="LOC107928210"
                     /coded_by="XM_016859395.2:605..1897"
                     /db_xref="GeneID:107928210"
ORIGIN      
        1 matasdirpm gvlnvlggrv llenptgrls clklcdgkig fssaglrsim phlrcstnsh
       61 gvslyqnkdr flnlhhevpm lrgegnkmit nprkesssgs vteilgdmng snnnneakik
      121 vigvggggsn avnrmiesem qgvefwivnt dvqamkmspi fperrlqigq eltrglgagg
      181 npeigmnaak eskesieeal ygadmvfvta gmgggtgtgg apviaglaks mgiltvgiat
      241 tpfsfegrrr tvqaqegiaa lrenvdtliv ipndklltav spstpvteaf nladdilrqg
      301 vrgisdiiti pglvnvdfad vrtimanags slmgigtatg ktrardaaln aiqsplldlg
      361 ieratgivwn itggsdltlf evnaaaeviy dlvdpaanli fgavidpsls gqylsneign
      421 giasllpwli
//
LOCUS       XP_016714823             422 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ABSCISIC ACID-INSENSITIVE 5 [Gossypium hirsutum].
ACCESSION   XP_016714823
VERSION     XP_016714823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859334.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..422
                     /product="protein ABSCISIC ACID-INSENSITIVE 5"
                     /calculated_mol_wt=45836
     Region          337..391
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          338..389
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(341..342,344..346,348..353,355..357)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(356,359..360,363..364,366..367,370..371,373..374,
                     377..378,380..381,384..385,387..388)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..422
                     /gene="LOC107928148"
                     /coded_by="XM_016859334.2:506..1774"
                     /db_xref="GeneID:107928148"
ORIGIN      
        1 mvvedsevge vestlkevdq qlknhplsal grqssiyslt ldefqhtlcg knfgsmnmde
       61 fltsiwnaee nqatnsinnn hhnngvneqv snhvnlslne tasskgvarq sslprqgsls
      121 lpaplcrktv devwseihkv qqgqgqsnns nvqnaentst rqptfgemtl edflvkagvv
      181 repcvppavp phsqhqqqfg lhqasnnpav gpsfvprpim gmggsggfgg styqtmppsg
      241 vlgdssryln dgkggggyqp aaappstaic yngkvgaagg fgpgqamgvv spispvspdg
      301 ictnqvdnaa tqfgieiggl rgrkriidgp iekvverrqr rmiknresaa rsrarkqayt
      361 veleaelnql kqenthlkqa lvelerkrkq qyfeewsmkt qtkaqkakek lrvmrrnlsg
      421 pl
//
LOCUS       XP_016714893             253 aa            linear   PLN 06-AUG-2024
DEFINITION  protein YIPF5 homolog [Gossypium hirsutum].
ACCESSION   XP_016714893
VERSION     XP_016714893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..253
                     /product="protein YIPF5 homolog"
                     /calculated_mol_wt=26928
     Region          <82..253
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..253
                     /gene="LOC107928217"
                     /coded_by="XM_016859404.2:81..842"
                     /db_xref="GeneID:107928217"
ORIGIN      
        1 makeftvppv vfpsgsgvnp svgninqrrv ptapfqpsrp pssssalpfm sfdmgsatss
       61 svslggsiss saatgsasfe deeplldelg ihpdqiwykt rsilnplrvn stahkdsdls
      121 gpiflylslc lfqllagkiq fgvilgwivv ssiflyvvfn mlagrngnld lhtctsvvgy
      181 cmlpvvifsa aslfipqgts varyavagvf vvwatractn lmvaladgge ehrglisyac
      241 fliytlfsll vif
//
LOCUS       XP_016714890             171 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger A20 and AN1 domain-containing stress-associated protein
            6 [Gossypium hirsutum].
ACCESSION   XP_016714890
VERSION     XP_016714890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 6"
                     /calculated_mol_wt=18634
     Region          14..37
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          112..149
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..171
                     /gene="LOC107928215"
                     /coded_by="XM_016859401.2:218..733"
                     /db_xref="GeneID:107928215"
ORIGIN      
        1 maeehrcqap eghrlcvnnc gflgspatmn lcskcyrdfr lkeqqqassa kssistspss
       61 sstavesvsq vplltlpevk gvppvvsava ispvteqkpq qqqqqqqqpt rctvcrkrvg
      121 ltgfkckcgi tfcgshrype nhgctfdfkk igreeiaran pvvkaekivr i
//
LOCUS       XP_016714891             171 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger A20 and AN1 domain-containing stress-associated protein
            6 [Gossypium hirsutum].
ACCESSION   XP_016714891
VERSION     XP_016714891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859402.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..171
                     /product="zinc finger A20 and AN1 domain-containing
                     stress-associated protein 6"
                     /calculated_mol_wt=18634
     Region          14..37
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          112..149
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..171
                     /gene="LOC107928215"
                     /coded_by="XM_016859402.2:208..723"
                     /db_xref="GeneID:107928215"
ORIGIN      
        1 maeehrcqap eghrlcvnnc gflgspatmn lcskcyrdfr lkeqqqassa kssistspss
       61 sstavesvsq vplltlpevk gvppvvsava ispvteqkpq qqqqqqqqpt rctvcrkrvg
      121 ltgfkckcgi tfcgshrype nhgctfdfkk igreeiaran pvvkaekivr i
//
LOCUS       XP_016714833             357 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g03610 [Gossypium hirsutum].
ACCESSION   XP_016714833
VERSION     XP_016714833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..357
                     /product="GDSL esterase/lipase At5g03610"
                     /calculated_mol_wt=39681
     Region          44..344
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(50,123,169,330,333)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(50,330,333)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(50,123,169)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..357
                     /gene="LOC107928162"
                     /coded_by="XM_016859344.2:143..1216"
                     /db_xref="GeneID:107928162"
ORIGIN      
        1 mdtqsflfsv fcflfyflsg epqvvegtrl swtsspfgfk pkmlfafgds yadtgntkia
       61 vtrswhfpyg itfpgkpsgr fsdgfvstdf vagylgmktp ipyrwrkels grvkyglnfa
      121 yggtgvfdtl vaepnmttqi dflqqlinds vytkrvlrts valvslagnd ysyyletngs
      181 aaafpgfiqs vvnqlmvnmk rihdlgvrki gvmsliplgc tpqntagssf qrcnetendl
      241 vmlhnnlllq avntlnqqtn stlffiidlh nafstvfngt eihqgsptfe npfepccfgv
      301 tegffcgsvd enggkkytlc snpktklfwd gnhptsegwr aiystpafqn tlkqfid
//
LOCUS       XP_016714874             489 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 94C1 [Gossypium hirsutum].
ACCESSION   XP_016714874
VERSION     XP_016714874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..489
                     /product="cytochrome P450 94C1"
                     /calculated_mol_wt=56331
     Region          27..483
                     /region_name="PLN02426"
                     /note="cytochrome P450, family 94, subfamily C protein"
                     /db_xref="CDD:215235"
     Site            order(119,123,130,176,283..284,287..288,291..292,295,347,
                     356,358,382,421..423,427..431,434..435)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410687"
     Site            order(204..205,283,286..287,291,354..357)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410687"
     CDS             1..489
                     /gene="LOC107928201"
                     /coded_by="XM_016859385.2:26..1495"
                     /db_xref="GeneID:107928201"
ORIGIN      
        1 melqaslffw ilifllyllf sllikpklwc nceicsaylt lswskqfnnl cdwythllkn
       61 spsktihihv lrntitanpe nieymlktkf hnfpkgkpfs iilgdflgrg ifnvdgdswk
      121 fqknmasmel gktstccyvf diinceiktr lvpllskqdq aldlqdvfkr fsfdvicwfs
      181 fgidpsclel slpmsklama fdlasklsae ramnvsplvw kikralnlgs ekelkraier
      241 inllakevir qrrktgflns ndllsrfmsi indetylrdi iisfllagrd tvasgltslf
      301 wllskhsnvv saikqeadri igenkeltcf dqmkelhylq atvyesmrly ppiqfdskfc
      361 qnddvlpdgs vlkkgtrvty ypyamgriee iwgedclefk perwlkhdgv fspenpfkyp
      421 ifqagfrvcl gkemallemk tvtlslirrf riqlltppsp dqhprflpgl tatfsdglpv
      481 lvrniqpqp
//
LOCUS       XP_016714875             114 aa            linear   PLN 06-AUG-2024
DEFINITION  60S acidic ribosomal protein P2A [Gossypium hirsutum].
ACCESSION   XP_016714875
VERSION     XP_016714875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..114
                     /product="60S acidic ribosomal protein P2A"
                     /calculated_mol_wt=11197
     Region          1..114
                     /region_name="Ribosomal_P1_P2_L12p"
                     /note="Ribosomal protein P1, P2, and L12p. Ribosomal
                     proteins P1 and P2 are the eukaryotic proteins that are
                     functionally equivalent to bacterial L7/L12. L12p is the
                     archaeal homolog. Unlike other ribosomal proteins, the
                     archaeal L12p and eukaryotic P1 and P2...; cl21508"
                     /db_xref="CDD:473891"
     CDS             1..114
                     /gene="LOC107928203"
                     /coded_by="XM_016859386.2:141..485"
                     /db_xref="GeneID:107928203"
ORIGIN      
        1 mkvvaaylla vlggntspsa ddlkailgsv gaeaederiq lllsavkgkd iteliasgre
       61 klasvpsggg gvavaaaapg agaaaapaaa eakkeekvee keesdddmgf slfd
//
LOCUS       XP_016714876             434 aa            linear   PLN 06-AUG-2024
DEFINITION  monodehydroascorbate reductase, seedling isozyme [Gossypium
            hirsutum].
ACCESSION   XP_016714876
VERSION     XP_016714876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..434
                     /product="monodehydroascorbate reductase, seedling
                     isozyme"
                     /calculated_mol_wt=47080
     Region          22..402
                     /region_name="NirB"
                     /note="NAD(P)H-nitrite reductase, large subunit [Energy
                     production and conversion]; COG1251"
                     /db_xref="CDD:440863"
     CDS             1..434
                     /gene="LOC107928204"
                     /coded_by="XM_016859387.2:105..1409"
                     /db_xref="GeneID:107928204"
ORIGIN      
        1 maeksfkyvi lgggvaagya arefakqgvq pgelaiiske avapyerpal skaylfpega
       61 arlpgfhvcv gsggerllpe wykekgiqli lsteivkadl paktvvsaag etfkyqilii
      121 atgstvirlt dfgvegadak nifylreidd adklleaika kkngkavivg ggyiglelaa
      181 vmkinnfdvt mvypepwcmp rlftpdiaaf yeeyyankgv kiikgtvavg ftsdsigevk
      241 evklkdgral eadivvvgvg grplttlfkg qveeekggik tdaffktsvp nvyavgdlat
      301 fplklynelr rvehvdhark saeqavkaik aseegksvde ydylpyfysr sfdlswqfyg
      361 dnvgdtvlfg dsnpksqkak fgsywikdgk vvgafleggt aeenqaiakv aklqpsvqsl
      421 eavkheglsf acki
//
LOCUS       XP_040943563             870 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943563
VERSION     XP_040943563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087629.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..870
                     /product="1,4-alpha-glucan-branching enzyme 2-2,
                     chloroplastic/amyloplastic isoform X1"
                     /calculated_mol_wt=99621
     Region          78..838
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
     CDS             1..870
                     /gene="LOC107928205"
                     /coded_by="XM_041087629.1:307..2919"
                     /db_xref="GeneID:107928205"
ORIGIN      
        1 mvysvsdlrl pcspsvysfn qssfnasrrs ssfslllkkd lfsrkifvqk ssydsdsspl
       61 tvaskkvlvp ddqgegassl tdelespsni sddpqvihdv eseemeddtk ieveeqesap
      121 kelstplnrk istekseakp rtipppgigq kiyeidpsll dfrqhldyry aqykrmreei
      181 dkyegglevf srgyeklgfv rsemgityre wapgaksaal igdfnnwnpn adimnrnefg
      241 vweiflpnna dgspaiphgs rvkirmetps gikdsipawi kfsvqapgei pyngiyydpp
      301 eeekyvfkhp rpkrpkslri yeshvgmssp epmintyanf rddvlprikr lgynavqima
      361 iqehsyyasf gyhvtnffap ssrfgtpddl kslidkahel gilvlmdivh shasnnvldg
      421 lnmfdgtdgh yfhtgsrghh svwdsrlfny gswevlryll snarwwleey kfdgyrfdgv
      481 tsmmyihhgl qvgftgnyne yfgyatdvda vvylmlvndm ihglypeavt igedvsgmpt
      541 fcipvqdggv gfdyrlhmai adkwieilkk rdedwkmgei vhsltnrrwm ekcvayaesh
      601 dqalvgdkti afwlmdkdmy efmaldrpst alidrgialh tmirlvtmgl ggegylnfmg
      661 nefghpewid fprgdqrlpn gvvipgngys ydkcrrrfdl gdadylryrg mqefdqamqh
      721 veekygfmts ehtyisrkde kdrvivferg nlvfvfnfhw nnsyfdyrvg cakpgkykiv
      781 ldsddplfgg fgrldhnaey fsfegwyddr prsfmvyapn rtavvyalve depkvvndle
      841 lveipetvkp aaaepvkese pdeeseplds
//
LOCUS       XP_040943564             766 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943564
VERSION     XP_040943564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087630.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..766
                     /product="1,4-alpha-glucan-branching enzyme 1,
                     chloroplastic/amyloplastic isoform X2"
                     /calculated_mol_wt=88198
     Region          12..734
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
     CDS             1..766
                     /gene="LOC107928205"
                     /coded_by="XM_041087630.1:318..2618"
                     /db_xref="GeneID:107928205"
ORIGIN      
        1 meddtkieve eqesapkels tplnrkiste kseakprtip ppgigqkiye idpslldfrq
       61 hldyryaqyk rmreeidkye gglevfsrgy eklgfvrsem gityrewapg aksaaligdf
      121 nnwnpnadim nrnefgvwei flpnnadgsp aiphgsrvki rmetpsgikd sipawikfsv
      181 qapgeipyng iyydppeeek yvfkhprpkr pkslriyesh vgmsspepmi ntyanfrddv
      241 lprikrlgyn avqimaiqeh syyasfgyhv tnffapssrf gtpddlksli dkahelgilv
      301 lmdivhshas nnvldglnmf dgtdghyfht gsrghhsvwd srlfnygswe vlryllsnar
      361 wwleeykfdg yrfdgvtsmm yihhglqvgf tgnyneyfgy atdvdavvyl mlvndmihgl
      421 ypeavtiged vsgmptfcip vqdggvgfdy rlhmaiadkw ieilkkrded wkmgeivhsl
      481 tnrrwmekcv ayaeshdqal vgdktiafwl mdkdmyefma ldrpstalid rgialhtmir
      541 lvtmglggeg ylnfmgnefg hpewidfprg dqrlpngvvi pgngysydkc rrrfdlgdad
      601 ylryrgmqef dqamqhveek ygfmtsehty isrkdekdrv ivfergnlvf vfnfhwnnsy
      661 fdyrvgcakp gkykivldsd dplfggfgrl dhnaeyfsfe gwyddrprsf mvyapnrtav
      721 vyalvedepk vvndlelvei petvkpaaae pvkesepdee seplds
//
LOCUS       XP_016714901             172 aa            linear   PLN 06-AUG-2024
DEFINITION  probable DNA double-strand break repair Rad50 ATPase [Gossypium
            hirsutum].
ACCESSION   XP_016714901
VERSION     XP_016714901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859412.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="probable DNA double-strand break repair Rad50
                     ATPase"
                     /calculated_mol_wt=20037
     Region          20..170
                     /region_name="Transcrip_act"
                     /note="Transcriptional activator; pfam04949"
                     /db_xref="CDD:398553"
     CDS             1..172
                     /gene="LOC107928226"
                     /coded_by="XM_016859412.2:272..790"
                     /db_xref="GeneID:107928226"
ORIGIN      
        1 mmqieqqqqq pqqqqnqlmv qnsgslsfss hlskedeeis ksalstfrak eeeierkkme
       61 vrekvqlqlg rveeetkrla vireeleala dpmrkevaqv rkkidavnke lkplgntcqk
      121 kereykeald afneknkekv qlitklmelv seseklrmkk leelsknids ih
//
LOCUS       XP_016714809             504 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein DDB_G0283697 [Gossypium hirsutum].
ACCESSION   XP_016714809
VERSION     XP_016714809.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714809.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..504
                     /product="uncharacterized protein DDB_G0283697"
                     /calculated_mol_wt=57682
     Region          <433..487
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..504
                     /gene="LOC107928133"
                     /coded_by="XM_016859320.2:398..1912"
                     /db_xref="GeneID:107928133"
ORIGIN      
        1 mmgrkhlhel lqedqepfvl kkyiadrrce lkkpspkthl qikkrkpitq tssfpsnfck
       61 nacffstktt tdftksplfe fpspvkrspc kspnaiflhi partaaille aalriqkqsk
      121 tknnggssgl fgsilkrith rnksrnseis nvegaevsvk dilrwdssvg knnqsgrpss
      181 savwsetnee ksmdldldts cscsqsedfe eifvnkdglr snaafgscde hfcespfhfv
      241 lqkspsfthr tplfssqtts psrrqkedke nyqvgnfkkl qveeeeeeqc spvsvldppf
      301 eddddrhvnd dndddnddek dgfdlecsya nvqrakqqll hklrrfekla eldpielekr
      361 mleddddddd neeeevenes vysdseinid viiqqvlkss fqnpervpdc mkrlvsdlit
      421 eeeaeadsdl etvakrvckr ieswkdvesn tidmmvdqdf krlevdgwkr neeqikeigs
      481 qleyaifgll meelseelvc lngi
//
LOCUS       XP_016714862             202 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydration-responsive element-binding protein 1F [Gossypium
            hirsutum].
ACCESSION   XP_016714862
VERSION     XP_016714862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859373.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..202
                     /product="dehydration-responsive element-binding protein
                     1F"
                     /calculated_mol_wt=21980
     Region          44..102
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(46..47,49,51,54,58,60,67,69,72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..202
                     /gene="LOC107928196"
                     /coded_by="XM_016859373.1:40..648"
                     /db_xref="GeneID:107928196"
ORIGIN      
        1 mvqsskshei sssssqseag stslgqsqkr kagrkkfket rhpifkgvrt rkgkwvsevr
       61 epnkksriwl gtfscpgmaa kaydvaalal rgdaaslnfp esahtlphpk slsvediqia
      121 ameaaatlid dktlpdsvss avpafpenmv fededevfnm pgilesmaeg lmitppsiqk
      181 gyypdddddd gndyvevnlw dd
//
LOCUS       XP_040943565             515 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor PTL isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943565
VERSION     XP_040943565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087631.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..515
                     /product="trihelix transcription factor PTL isoform X1"
                     /calculated_mol_wt=58619
     Region          126..191
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     Region          <273..>385
                     /region_name="ZUO1"
                     /note="Ribosome-associated chaperone zuotin [Translation,
                     ribosomal structure and biogenesis / Posttranslational
                     modification, protein turnover, chaperones]; COG5269"
                     /db_xref="CDD:227594"
     Region          389..447
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     CDS             1..515
                     /gene="LOC107928156"
                     /coded_by="XM_041087631.1:229..1776"
                     /db_xref="GeneID:107928156"
ORIGIN      
        1 memenhhhhh hqhhqygmpd lrqllngrps hfqtvqqgse lfssgdrnlp plqhhhqfdm
       61 mqmvgrqvvg helmprgglh hefssaaaat ptaamaaavn sgstpsascg fegeaiafgg
      121 dggtgrwprq etltlleirs rldpkfkean qkgplwdevs rimcedhgyq rsgkkcrekf
      181 enlykyykkt kegkagrqdg khyrffrqle alygessnsv sghqftgngf gfhgtqncni
      241 ghsqklcdsl slsnsfefep sssddndlst emeinggsse krkkkrsggg sskcwkakik
      301 efidlqmrkl mdrqetwlek ltktleekek ervlreeqwr keeaariere qklwakerar
      361 ieardsalme alqnltgkql keivkpddwq etevsrliql kttmegcsee ilweevaakm
      421 aclgfeksal mcktkwesig aylmknkdsn rkrkencdyy hnnneplysd svshsnatag
      481 aagngvndsc frflmadgen ywesyglkln kgenq
//
LOCUS       XP_040943566             451 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor PTL isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943566
VERSION     XP_040943566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087632.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..451
                     /product="trihelix transcription factor PTL isoform X2"
                     /calculated_mol_wt=51574
     Region          126..191
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     Region          325..383
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     CDS             1..451
                     /gene="LOC107928156"
                     /coded_by="XM_041087632.1:230..1585"
                     /db_xref="GeneID:107928156"
ORIGIN      
        1 memenhhhhh hqhhqygmpd lrqllngrps hfqtvqqgse lfssgdrnlp plqhhhqfdm
       61 mqmvgrqvvg helmprgglh hefssaaaat ptaamaaavn sgstpsascg fegeaiafgg
      121 dggtgrwprq etltlleirs rldpkfkean qkgplwdevs rimcedhgyq rsgkkcrekf
      181 enlykyykkt kegkagrqdd dndlstemei nggssekrkk krsgggsskc wkakikefid
      241 lqmrklmdrq etwlekltkt leekekervl reeqwrkeea ariereqklw akerariear
      301 dsalmealqn ltgkqlkeiv kpddwqetev srliqlkttm egcseeilwe evaakmaclg
      361 feksalmckt kwesigaylm knkdsnrkrk encdyyhnnn eplysdsvsh snatagaagn
      421 gvndscfrfl madgenywes yglklnkgen q
//
LOCUS       XP_016714803             358 aa            linear   PLN 06-AUG-2024
DEFINITION  fructose-bisphosphate aldolase 6, cytosolic [Gossypium hirsutum].
ACCESSION   XP_016714803
VERSION     XP_016714803.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714803.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..358
                     /product="fructose-bisphosphate aldolase 6, cytosolic"
                     /calculated_mol_wt=38422
     Region          1..358
                     /region_name="PLN02455"
                     /note="fructose-bisphosphate aldolase"
                     /db_xref="CDD:178074"
     Site            order(30..32,35,103,142,144,183,225,265..267,295,297..298)
                     /site_type="active"
                     /db_xref="CDD:188635"
     Site            order(106,157,160..161,164,168,171,199,203,206,213..214,
                     216,220,252..253,255)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:188635"
     Site            225
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188635"
     CDS             1..358
                     /gene="LOC107928128"
                     /coded_by="XM_016859314.2:132..1208"
                     /db_xref="GeneID:107928128"
ORIGIN      
        1 mscfiskyad elaknaayig tpgkgilaad estgtigkrl asinvenvee nrralrellf
       61 tapgalqfis gviffeetly qktasgklfv dvlkesgvlp gikvdtgtvv lngtndetft
      121 qgldglaqrc qkyyeagarf akwravlkig tieptelaiq enanglamys aicqqcglvp
      181 ivepeilvdg phdinkcaav tervlaacyk alndhhvmle gtllkpnmvt pgsdspkvap
      241 eviaehtvra lqrtippavp avvflsggqs eeeatinlna mnklktkkpw slsfsfgral
      301 qqstlkawgg kaenlgkaqe aflvrckans eatlgtykgd aklgegaaes lhvkdyky
//
LOCUS       XP_016714808             285 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714808
VERSION     XP_016714808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859319.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32234
     Region          39..282
                     /region_name="DUF868"
                     /note="Plant protein of unknown function (DUF868);
                     pfam05910"
                     /db_xref="CDD:428668"
     CDS             1..285
                     /gene="LOC107928131"
                     /coded_by="XM_016859319.2:194..1051"
                     /db_xref="GeneID:107928131"
ORIGIN      
        1 mrsitscsie kaikvsdsyc swpsinqayi spnhvpstpn tvtciykakt spqthlfitl
       61 twcnisqgls ikvsdnlnri sepyqlknnk gnkgfkacns eieviwdvsn aefingspep
      121 tskyslivlv dsricfllgd nidekadpsf nlisrtetfi antvystkar fcesglahdi
      181 lieycnggel cvsidkkevf qvkrlkwnfr gnqiifldgl lvdmmwdlhd wvfkqtngra
      241 vfmfrtrsgf dsrlwleeks gclehsdkgr ghefsllica cknpr
//
LOCUS       XP_016687499              93 aa            linear   PLN 06-AUG-2024
DEFINITION  putative phytosulfokines 6 [Gossypium hirsutum].
ACCESSION   XP_016687499
VERSION     XP_016687499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832010.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..93
                     /product="putative phytosulfokines 6"
                     /calculated_mol_wt=10699
     Region          20..93
                     /region_name="PSK"
                     /note="Phytosulfokine precursor protein (PSK); pfam06404"
                     /db_xref="CDD:399419"
     CDS             1..93
                     /gene="LOC107905361"
                     /coded_by="XM_016832010.2:89..370"
                     /db_xref="GeneID:107905361"
ORIGIN      
        1 mkakfsgfit flflaflllc sssvsarlll qinnhgekel kanemmmiqa drkddfselm
       61 gaeecyekde ecvkrrmmad ahldyiytqn hkp
//
LOCUS       XP_016687496             314 aa            linear   PLN 06-AUG-2024
DEFINITION  ribosome production factor 2 homolog [Gossypium hirsutum].
ACCESSION   XP_016687496
VERSION     XP_016687496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832007.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..314
                     /product="ribosome production factor 2 homolog"
                     /calculated_mol_wt=35217
     Region          1..306
                     /region_name="Brix"
                     /note="The Brix domain is found in a number of eukaryotic
                     proteins; cl00935"
                     /db_xref="CDD:469999"
     CDS             1..314
                     /gene="LOC107905359"
                     /coded_by="XM_016832007.2:248..1192"
                     /db_xref="GeneID:107905359"
ORIGIN      
        1 mmkiktpkkg rvkreldkra pklvetgkkt lilqgtktsg tlnsvlseiy hlkkggavrf
       61 trkndnirpf esggetslef fslktdcsif vygshskkrp nnlvigrmyd hhvydlvevg
      121 venfksiesf tydkkiaprv gskpfiafvg egfenvdelk hlkevlldll rgkvveninl
      181 agldrayvct aissnkvylt hcalrlkksg tvvprmelve vgpsmdlvvr rhrlpneglr
      241 keamktakdq pkkkvknvss daiqgtigki yipdqkvgem alpnkakgvk rerreaknkd
      301 anehaskkqk eese
//
LOCUS       XP_016687497              93 aa            linear   PLN 06-AUG-2024
DEFINITION  putative phytosulfokines 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687497
VERSION     XP_016687497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832008.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..93
                     /product="putative phytosulfokines 6 isoform X1"
                     /calculated_mol_wt=10383
     Region          22..93
                     /region_name="PSK"
                     /note="Phytosulfokine precursor protein (PSK); pfam06404"
                     /db_xref="CDD:399419"
     CDS             1..93
                     /gene="LOC107905360"
                     /coded_by="XM_016832008.2:73..354"
                     /db_xref="GeneID:107905360"
ORIGIN      
        1 mkqkivgfis flslaflllc csstsarllm qinhetgeke vkanemiiqa dakddfsnli
       61 gaekcyekde eclerrmiad agldyiysqs nkp
//
LOCUS       XP_016687498              91 aa            linear   PLN 06-AUG-2024
DEFINITION  putative phytosulfokines 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687498
VERSION     XP_016687498.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832009.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..91
                     /product="putative phytosulfokines 6 isoform X2"
                     /calculated_mol_wt=10153
     Region          22..91
                     /region_name="PSK"
                     /note="Phytosulfokine precursor protein (PSK); pfam06404"
                     /db_xref="CDD:399419"
     CDS             1..91
                     /gene="LOC107905360"
                     /coded_by="XM_016832009.2:74..349"
                     /db_xref="GeneID:107905360"
ORIGIN      
        1 mkqkivgfis flslaflllc csstsarllm qinhgekevk anemiiqada kddfsnliga
       61 ekcyekdeec lerrmiadag ldyiysqsnk p
//
LOCUS       XP_016687495             369 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: delta(14)-sterol reductase [Gossypium
            hirsutum].
ACCESSION   XP_016687495
VERSION     XP_016687495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832006.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="LOW QUALITY PROTEIN: delta(14)-sterol reductase"
                     /calculated_mol_wt=41797
     Region          10..369
                     /region_name="ICMT"
                     /note="Isoprenylcysteine carboxyl methyltransferase (ICMT)
                     family; cl21511"
                     /db_xref="CDD:473892"
     CDS             1..369
                     /gene="LOC107905357"
                     /coded_by="XM_016832006.2:79..1188"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:107905357"
ORIGIN      
        1 mdlgfllqal ipsrnsvavl liffaylaia gsilpgklvp gvtlqdgsrl yyrcnglral
       61 lllvgllgig skmnfvsptv isnrglells ttfifsfltm vvlyaagcrs cskgsslkph
      121 itgnlihdww ygiqlnpqfm gidlkfffvr agmmgwliin lsvlaksvqd gslsqsmily
      181 qlfcafyild yfvheeymts twdiiaerlg fmlvfgdlvw ipftfsiqgw wllnnkvelt
      241 tataiancfv fligylvfrg ankqkhifkq npkahiwgkp pkvvggklla sgywgiarhs
      301 nylgdlllal sfslpcglss pipyfypiyl fillvwrerr dearcaekyk diwaeycrlv
      361 pwrifpyly
//
LOCUS       XP_016687491             309 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase HDT3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687491
VERSION     XP_016687491.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832002.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..309
                     /product="histone deacetylase HDT3 isoform X1"
                     /calculated_mol_wt=33065
     Region          3..101
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          284..305
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          284..>305
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     CDS             1..309
                     /gene="LOC107905356"
                     /coded_by="XM_016832002.2:196..1125"
                     /db_xref="GeneID:107905356"
ORIGIN      
        1 mefwgaevks gqnfeveled dgnrilhlsq valgegtgdn kkekgketic lylkfknekf
       61 vvgtlsqekc pqialdlvlh dkfelshtgk ngsvyvtgyy vdtsqgsdte seedlleptm
      121 nlvkseppas dptttkqvki vepkkdddss dedeedssae deesseeqep rmlvngends
      181 ddadsdedds eedssdedqk tpekagpskk rpaesskktp apekkaklvt pqktvhsgad
      241 skkagghtat phtskkagkt saaaaaaaaa qvkqtpksgg sfpckscgrs fgsenalqsh
      301 skakhgtqa
//
LOCUS       XP_016687492             308 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase HDT3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687492
VERSION     XP_016687492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832003.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="histone deacetylase HDT3 isoform X2"
                     /calculated_mol_wt=32977
     Region          3..101
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          283..304
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          283..>304
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     CDS             1..308
                     /gene="LOC107905356"
                     /coded_by="XM_016832003.2:171..1097"
                     /db_xref="GeneID:107905356"
ORIGIN      
        1 mefwgaevks gqnfeveled dgnrilhlsq valgegtgdn kkekgketic lylkfknekf
       61 vvgtlsqekc pqialdlvlh dkfelshtgk ngsvyvtgyy vdtsqgntes eedlleptmn
      121 lvkseppasd ptttkqvkiv epkkdddssd edeedssaed eesseeqepr mlvngendsd
      181 dadsdeddse edssdedqkt pekagpskkr paesskktpa pekkaklvtp qktvhsgads
      241 kkagghtatp htskkagkts aaaaaaaaaq vkqtpksggs fpckscgrsf gsenalqshs
      301 kakhgtqa
//
LOCUS       XP_016687493             307 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase HDT3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016687493
VERSION     XP_016687493.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832004.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..307
                     /product="histone deacetylase HDT3 isoform X3"
                     /calculated_mol_wt=32921
     Region          3..101
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          282..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          282..>303
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     CDS             1..307
                     /gene="LOC107905356"
                     /coded_by="XM_016832004.2:227..1150"
                     /db_xref="GeneID:107905356"
ORIGIN      
        1 mefwgaevks gqnfeveled dgnrilhlsq valgegtgdn kkekgketic lylkfknekf
       61 vvgtlsqekc pqialdlvlh dkfelshtgk ngsvyvtgyy vdtsqdtese edlleptmnl
      121 vkseppasdp tttkqvkive pkkdddssde deedssaede esseeqeprm lvngendsdd
      181 adsdeddsee dssdedqktp ekagpskkrp aesskktpap ekkaklvtpq ktvhsgadsk
      241 kagghtatph tskkagktsa aaaaaaaaqv kqtpksggsf pckscgrsfg senalqshsk
      301 akhgtqa
//
LOCUS       XP_016687494             304 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase HDT3 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016687494
VERSION     XP_016687494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832005.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..304
                     /product="histone deacetylase HDT3 isoform X4"
                     /calculated_mol_wt=32614
     Region          3..101
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          279..300
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          279..>300
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     CDS             1..304
                     /gene="LOC107905356"
                     /coded_by="XM_016832005.2:171..1085"
                     /db_xref="GeneID:107905356"
ORIGIN      
        1 mefwgaevks gqnfeveled dgnrilhlsq valgegtgdn kkekgketic lylkfknekf
       61 vvgtlsqekc pqialdlvlh dkfelshtgk ngsvyvtgyy vdtsqgsdte seedlleptm
      121 nlvkseppas dptttkqvki vepkkdddss dedeedssae deesseeqep rmlvngends
      181 ddadsdedds eedssdedqk tpekagpskk rpaesskktp apekkaklvt pqktdskkag
      241 ghtatphtsk kagktsaaaa aaaaaqvkqt pksggsfpck scgrsfgsen alqshskakh
      301 gtqa
//
LOCUS       XP_040943567             303 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase HDT3 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943567
VERSION     XP_040943567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087633.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..303
                     /product="histone deacetylase HDT3 isoform X5"
                     /calculated_mol_wt=32525
     Region          3..101
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          278..299
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          278..>299
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     CDS             1..303
                     /gene="LOC107905356"
                     /coded_by="XM_041087633.1:172..1083"
                     /db_xref="GeneID:107905356"
ORIGIN      
        1 mefwgaevks gqnfeveled dgnrilhlsq valgegtgdn kkekgketic lylkfknekf
       61 vvgtlsqekc pqialdlvlh dkfelshtgk ngsvyvtgyy vdtsqgntes eedlleptmn
      121 lvkseppasd ptttkqvkiv epkkdddssd edeedssaed eesseeqepr mlvngendsd
      181 dadsdeddse edssdedqkt pekagpskkr paesskktpa pekkaklvtp qktdskkagg
      241 htatphtskk agktsaaaaa aaaaqvkqtp ksggsfpcks cgrsfgsena lqshskakhg
      301 tqa
//
LOCUS       XP_040943568             302 aa            linear   PLN 06-AUG-2024
DEFINITION  histone deacetylase HDT3 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943568
VERSION     XP_040943568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087634.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..302
                     /product="histone deacetylase HDT3 isoform X6"
                     /calculated_mol_wt=32469
     Region          3..101
                     /region_name="NPL"
                     /note="Nucleoplasmin-like domain; pfam17800"
                     /db_xref="CDD:465511"
     Region          277..298
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          277..>298
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     CDS             1..302
                     /gene="LOC107905356"
                     /coded_by="XM_041087634.1:171..1079"
                     /db_xref="GeneID:107905356"
ORIGIN      
        1 mefwgaevks gqnfeveled dgnrilhlsq valgegtgdn kkekgketic lylkfknekf
       61 vvgtlsqekc pqialdlvlh dkfelshtgk ngsvyvtgyy vdtsqdtese edlleptmnl
      121 vkseppasdp tttkqvkive pkkdddssde deedssaede esseeqeprm lvngendsdd
      181 adsdeddsee dssdedqktp ekagpskkrp aesskktpap ekkaklvtpq ktdskkaggh
      241 tatphtskka gktsaaaaaa aaaqvkqtpk sggsfpcksc grsfgsenal qshskakhgt
      301 qa
//
LOCUS       XP_016687490             445 aa            linear   PLN 06-AUG-2024
DEFINITION  enolase [Gossypium hirsutum].
ACCESSION   XP_016687490
VERSION     XP_016687490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..445
                     /product="enolase"
                     /calculated_mol_wt=47548
     Region          1..442
                     /region_name="PLN00191"
                     /note="enolase"
                     /db_xref="CDD:215095"
     CDS             1..445
                     /gene="LOC107905355"
                     /coded_by="XM_016832001.2:387..1724"
                     /db_xref="GeneID:107905355"
ORIGIN      
        1 maativsvka rqifdsrgnp tvevdvetsn gikaraavps gastgiyeal elrdggsdyl
       61 gkgvskavan vntiigpali gkdpteqtai dnfmvqqldg tqnewgwckq klganailav
      121 slavckagae vkklplykhi anlagnsklv lpvpafnvin ggshagnkla mqefmilpvg
      181 assfkeamkm gvevyhhlks vikkkygqda tnvgdeggfa pniqenkegl ellntaiaka
      241 gytgkvvigm dvaasefygt dktydlnfke enndgkqkis gdalkdlyks fvaeypivsi
      301 edpfdqddwe hyskltkeig ekvqivgddl lvtnpkrvak aiaektcnal llkvnqigsv
      361 tesieavkms kqagwgvmas hrsgetedtf iadlsvglat gqiktgapcr serlakynql
      421 lrieeelgae avyagasfra pvapy
//
LOCUS       XP_040943569             817 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g12100,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040943569
VERSION     XP_040943569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087635.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..817
                     /product="pentatricopeptide repeat-containing protein
                     At5g12100, mitochondrial"
                     /calculated_mol_wt=92058
     Region          112..137
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          135..>281
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          145..172
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          180..207
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          211..260
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          215..242
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <240..>643
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          250..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          283..312
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          318..347
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          353..377
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          390..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          425..452
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          460..487
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <486..>803
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          493..522
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          528..556
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          565..592
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          598..627
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          633..661
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          667..696
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          702..731
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          737..766
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          772..801
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..817
                     /gene="LOC121214029"
                     /coded_by="XM_041087635.1:13..2466"
                     /db_xref="GeneID:121214029"
ORIGIN      
        1 mvyqcqksnm aakrvtllsq lsftsqkkpk plstlstqss sqaantnekh etfvlhhhec
       61 hhhiqelttl lqqgqteaaq tltksllssk spsdlfnlfs ftsyslklsf snilfsllaq
      121 skmhseamel ykairkegmq psitslnlll dslvslnkfd gtlnlfeeii gsgfrpnkfm
      181 ygkaiqaavk lgdlkrayef lddmkqkgvn pslfiynvli sglckerrir eaekgfseil
      241 erklapslvt yntlidgyck vgdlekafgl kermvkenve pnivtfntli sglchaqrme
      301 eakwvlkeme argfvgdgyt fsilfdgflk sgngesamal yeemkgkgvg inryalsnwl
      361 nhlckegdfe kaeevlqnei ekgfvpnevv fntivkgycq igdmnraist vehmeklglr
      421 pdyvtfntli gkffemkeve naeewvkkmr ekgvspkvet ynvfingygk mnvldrcfav
      481 leemerdgik pnvvtygslv nclckngmll eaeitfkdmi srgvlpnvlv yntliagnca
      541 agnltdafky fdemvkgetr ptivtyntli sglckkgrit eaeallpkit sngcspdvit
      601 yntllsgysn egnaekcldl yenmkslgik ptlntyhpli sgcskkgiel aerlfremee
      661 mhltpdllty nvlihlyaeh gdvqnavslh remidrgicp dkmtynslil gqfkngklle
      721 ikdvvddmka kglvpkadty tllikgyceh kdfigayvwy remfenhflp rfttckelvi
      781 glkeqgksqe aqiiclemka kgmdnwnsde dvselav
//
LOCUS       XP_040943570             227 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxiredoxin-2E, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943570
VERSION     XP_040943570.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087636.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..227
                     /product="peroxiredoxin-2E, chloroplastic"
                     /calculated_mol_wt=23981
     Region          66..227
                     /region_name="AHP1"
                     /note="Peroxiredoxin [Posttranslational modification,
                     protein turnover, chaperones]; COG0678"
                     /db_xref="CDD:440442"
     CDS             1..227
                     /gene="LOC121214030"
                     /coded_by="XM_041087636.1:1..684"
                     /db_xref="GeneID:121214030"
ORIGIN      
        1 maatsltlsr flspaaaisl ssttklssks lplklssvsp lpfnlhrrrv skpisfstkt
       61 tqisaaisvg dklpdatlsy fdsdgelqtt tissltagkk tvifavpgaf tptcsqkhlp
      121 gfveksgelk akgvntiacv svndafvmra wkenlgikde vlllsdgnge ftkkigceld
      181 ltdkpvglgv rsrryallae dgvvkllnle eggaftfsga edilkvl
//
LOCUS       XP_016687487             529 aa            linear   PLN 06-AUG-2024
DEFINITION  glucomannan 4-beta-mannosyltransferase 9 [Gossypium hirsutum].
ACCESSION   XP_016687487
VERSION     XP_016687487.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831998.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687487.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="glucomannan 4-beta-mannosyltransferase 9"
                     /calculated_mol_wt=60411
     Region          93..329
                     /region_name="CESA_CaSu_A2"
                     /note="Cellulose synthase catalytic subunit A2 (CESA2) is
                     a catalytic subunit or a catalytic subunit substitute of
                     the cellulose synthase complex; cd06437"
                     /db_xref="CDD:133059"
     Site            191..193
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133059"
     CDS             1..529
                     /gene="LOC107905352"
                     /coded_by="XM_016831998.2:399..1988"
                     /db_xref="GeneID:107905352"
ORIGIN      
        1 mdqfpsttif pdttddlsmq maviwgqika plivpllkla vvvclimsvi lfiervymgi
       61 vialvklfgr kpdkrfkwea ikddvelgns aypmvlvqip mynerevyql sigaacglsw
      121 psdriviqvl ddstdptikd mvelecqrwa skginikyei rdnrngykag alkegmkhsy
      181 vkhcdyvvif dadfqpepdf lwrtipflvh npelalvqar wkfvnadecl mtrmqemsld
      241 yhftveqevg sstysffgfn gtagvwrisa lneaggwkdr ttvedmdlav raslkgwkfl
      301 ylgslkvkne lpstlkayry qqhrwscgpa nlfrkmvmei iknkkvstwk kvhviysffv
      361 vrklvahivt fifycvilpa tvlvpevevp kwgavyipsi itilnavgtp rsfhllvfwi
      421 lfenvmslhr tkatfiglle agrvnewivt eklgdahksk aaakaprkpr frfgerlhvl
      481 elsvgaylff cgcydvvfgk nhyfiylfaq aiaffimgfg yvgtivpns
//
LOCUS       XP_016687486             568 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSK SIMULATOR 1 [Gossypium hirsutum].
ACCESSION   XP_016687486
VERSION     XP_016687486.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831997.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..568
                     /product="protein PSK SIMULATOR 1"
                     /calculated_mol_wt=64600
     Region          32..87
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          400..490
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..568
                     /gene="LOC107905351"
                     /coded_by="XM_016831997.2:357..2063"
                     /db_xref="GeneID:107905351"
ORIGIN      
        1 mgreiveswf ggswwnprks asestdkvvl gilafevagl mskvvnlwhs lddreifrlr
       61 eeiansigiq rlvsddesyv mdlalnevie nfghlatyva rlgkkctdpv yhrfeafind
      121 pllnnlewfg weyrwkkmek kmkkmerfva vtmqltqele vlaeleqtlr rmqrnpeldr
      181 vkllefqqkv ilqrqevknl remspwvrty dyivrfllrs lltvlerikn vfgtnqmvpv
      241 drnddfesvn sdylsrshsf stvipssvyp sdhnlcgfss gplgrsfsks msitgkhrtn
      301 ikhlhshyhs talhgkqphs rtkraghaaf gpfkgcmlag sispvldsyk pigtastrfs
      361 gaypknidnl kmeplsrsyn iysklsifnt krllnapist lggaalslry anliiliekl
      421 vssphlisvd arddlytmlp ttmrnalrvk lkpfakslas siydaslaae wslalvrile
      481 wlaplahnti rwqsehnlee qhiisgsnil lvqtlhfadq akteaaitel lvglnyvyri
      541 ggahnekslp esagngcaqy llkrddkr
//
LOCUS       XP_016687485             674 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat receptor-like protein kinase PXC1 [Gossypium
            hirsutum].
ACCESSION   XP_016687485
VERSION     XP_016687485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831996.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..674
                     /product="leucine-rich repeat receptor-like protein kinase
                     PXC1"
                     /calculated_mol_wt=74117
     Region          <91..640
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          93..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          368..642
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(368..372,376,388,390,419,435..438,442,444,490,492,
                     494..495,497,508,511,523..526)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(368..372,376,388,390,419,435..438,442,490,492,
                     494..495,497,508)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(372,442,444,490,492,494,511,523..526)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(507..514,519..526)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..674
                     /gene="LOC107905349"
                     /coded_by="XM_016831996.2:191..2215"
                     /db_xref="GeneID:107905349"
ORIGIN      
        1 mnsqsslqfl lflslsslfl slssstndtd tltlfrrqad thgnlisnwt grdacssawh
       61 gvvcsstgrv islslpslsl rgpiaalsll dqlrildlqn nrlngtvspl tncsnlklvy
      121 lsdndfsgdi ppeisrlkrl lrldlsnnni rgnvpkeisg lkrlitlrlq nnaltgeipd
      181 ffssfkslke lnltnneffg rlpgsllkkf seksfvgneg lcgsnpfpvc sftgsppvdt
      241 ptetvpsnps smprtpiieq erpkahkelt pgaivaivva ncvvflvvvs favayfcgrn
      301 ngeivwksgs dggkrssygs ekkvyatggl pepdsdgtna tdrsklvffe rrkqfeledl
      361 lrasaemlgk gslgtvykav lddgctvavk rlkdanpcpr kefeqymdvi gkikhpnvvk
      421 lrayyyakee kllvydylpn gslhsllhgn rgpgripldw ttrislvlga arglakihee
      481 yntpkiphgn vkssnvlldk ngvalisdfg lslllnpvha iarlggyrap eqaevkrlsq
      541 madvysfgvl llevltgrap sqypsptrpr iedeepavdl pkwvrsvvke ewtaevfdqe
      601 llryknieee lvsmlhvgla cvvpqsekrp tmtevakmie dirveqsplg edydesrnsi
      661 spsiattedg iagy
//
LOCUS       XP_016687484             527 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate kinase 1, cytosolic [Gossypium hirsutum].
ACCESSION   XP_016687484
VERSION     XP_016687484.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831995.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687484.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..527
                     /product="pyruvate kinase 1, cytosolic"
                     /calculated_mol_wt=57279
     Region          1..527
                     /region_name="PLN02765"
                     /note="pyruvate kinase"
                     /db_xref="CDD:215409"
     CDS             1..527
                     /gene="LOC107905348"
                     /coded_by="XM_016831995.2:232..1815"
                     /db_xref="GeneID:107905348"
ORIGIN      
        1 mhsthlllee pirmasilep skasffpamt kivgtlgpks rsievisgcl kagmsvarfd
       61 fswhdpayhq etlenlkaav kltkklcavm ldtvgaemqv vnksekaisl eadaivvltp
      121 degqeassel lpinfdglsk avkkgdtifi gqylftgset tsvwlevsev kgddvvcvik
      181 nsatlagslf tlhgsqirig lptltdkdke vistwgvqnk idflslsytr haedvrqare
      241 flsklgdlyq tqifakieni eglnhfdeil qeadgiilsr gnlgidlppe kvflfqkaal
      301 ykcnmagkpa vvtrvvdsmt dnlrptraea tdvanavldg sdaillgaet lrglypveti
      361 stvgkicaea ekvfnqdmyf kktvkyvgep mthlesiass avraaikvka sviicftssg
      421 raarliakyr ptmpvlsvvi prlktnqlkw sfsgafearq slivrglfpm ladprhpaes
      481 tsasnesvlk valdhgkaag vikshdrvvv cqkvgdasvv kiieled
//
LOCUS       XP_016687483             527 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate kinase 1, cytosolic [Gossypium hirsutum].
ACCESSION   XP_016687483
VERSION     XP_016687483.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831994.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687483.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..527
                     /product="pyruvate kinase 1, cytosolic"
                     /calculated_mol_wt=57206
     Region          1..527
                     /region_name="PLN02765"
                     /note="pyruvate kinase"
                     /db_xref="CDD:215409"
     CDS             1..527
                     /gene="LOC107905347"
                     /coded_by="XM_016831994.2:222..1805"
                     /db_xref="GeneID:107905347"
ORIGIN      
        1 mhsshlllee pirmasilep skasffpamt kivgtlgpks rsvevisgcl kagmsvarfd
       61 fswhdpeyhq etlenlkaav kltkklcavm ldtvgaemqv vnksenaisl eadatvvltp
      121 dagqeassel lpinfdglsk avkkgdtifi gqylftgset tsvwlevsev kgddvvcvik
      181 nsatlagslf tlhgsqihig lptltdkdke vistwgvqnk idflslsytr haedvrqare
      241 flsklgdlyq tqifakieni eglnhfdeil qeadgiilsr gnlgidlppe kvflfqkaal
      301 ykcnmagkpa vvtrvvdsmt dnlrptraea tdvanavldg sdaillgaet lrglypveti
      361 stvgkicsea ekvfnqdmff kktvkyvgep mthlesiass avraaikvka sviicftssg
      421 raarliakyr ptmpvlsvvi prlktnqlkw sfsgafearq slivrglfpm ladprhpaes
      481 tsasnesvlk valdhgkaag vikshdrvvv cqkvgdasvv kiieled
//
LOCUS       XP_016687481             456 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-related protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687481
VERSION     XP_016687481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831992.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..456
                     /product="kinesin-related protein 4 isoform X1"
                     /calculated_mol_wt=51635
     Region          107..207
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..456
                     /gene="LOC107905346"
                     /coded_by="XM_016831992.2:321..1691"
                     /db_xref="GeneID:107905346"
ORIGIN      
        1 metnnglsgg mflgigsgml glemplhpqp qqqpqnpqsv qnphslhhqq qhpqvvayah
       61 hetqhvkqgy hpfgskpkqi stisdedepg ftlddggskr kaspwqrmkw tdnmvrllim
      121 avyyigddqa sseggnnndp sgkkkggggs ggllqkkgkw ksvsrammek gfyvspqqce
      181 dkfndlnkry krvneilgkg tacevvenqr llesmdlspk mkdevkklln skhlffremc
      241 ayhnscghvt qevanetppq mqqrclhssd naqiggnpvg gstetlklee sddedddddd
      301 ddesdgdddd ddketmdghd edqnvenssr krprkggvsp smqqlsnevt kviqdgskns
      361 wekkhwlkmk lmqleeqevs yqceafelek qrlkwvkfsg kkeremeksk lenqrkrlen
      421 ermvlivrqq elklvdmsdv rqhasnkrgd lssfts
//
LOCUS       XP_016687482             438 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase dbp4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687482
VERSION     XP_016687482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831993.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..438
                     /product="ATP-dependent RNA helicase dbp4 isoform X2"
                     /calculated_mol_wt=49911
     Region          89..189
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..438
                     /gene="LOC107905346"
                     /coded_by="XM_016831993.2:172..1488"
                     /db_xref="GeneID:107905346"
ORIGIN      
        1 mlglemplhp qpqqqpqnpq svqnphslhh qqqhpqvvay ahhetqhvkq gyhpfgskpk
       61 qistisdede pgftlddggs krkaspwqrm kwtdnmvrll imavyyigdd qasseggnnn
      121 dpsgkkkggg gsggllqkkg kwksvsramm ekgfyvspqq cedkfndlnk rykrvneilg
      181 kgtacevven qrllesmdls pkmkdevkkl lnskhlffre mcayhnscgh vtqevanetp
      241 pqmqqrclhs sdnaqiggnp vggstetlkl eesddedddd ddddesdgdd ddddketmdg
      301 hdedqnvens srkrprkggv spsmqqlsne vtkviqdgsk nswekkhwlk mklmqleeqe
      361 vsyqceafel ekqrlkwvkf sgkkeremek sklenqrkrl enermvlivr qqelklvdms
      421 dvrqhasnkr gdlssfts
//
LOCUS       XP_040943572             438 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent RNA helicase dbp4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943572
VERSION     XP_040943572.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087638.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..438
                     /product="ATP-dependent RNA helicase dbp4 isoform X2"
                     /calculated_mol_wt=49911
     Region          89..189
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..438
                     /gene="LOC107905346"
                     /coded_by="XM_041087638.1:198..1514"
                     /db_xref="GeneID:107905346"
ORIGIN      
        1 mlglemplhp qpqqqpqnpq svqnphslhh qqqhpqvvay ahhetqhvkq gyhpfgskpk
       61 qistisdede pgftlddggs krkaspwqrm kwtdnmvrll imavyyigdd qasseggnnn
      121 dpsgkkkggg gsggllqkkg kwksvsramm ekgfyvspqq cedkfndlnk rykrvneilg
      181 kgtacevven qrllesmdls pkmkdevkkl lnskhlffre mcayhnscgh vtqevanetp
      241 pqmqqrclhs sdnaqiggnp vggstetlkl eesddedddd ddddesdgdd ddddketmdg
      301 hdedqnvens srkrprkggv spsmqqlsne vtkviqdgsk nswekkhwlk mklmqleeqe
      361 vsyqceafel ekqrlkwvkf sgkkeremek sklenqrkrl enermvlivr qqelklvdms
      421 dvrqhasnkr gdlssfts
//
LOCUS       XP_016687480             315 aa            linear   PLN 06-AUG-2024
DEFINITION  putative homeobox-leucine zipper protein ATHB-51 [Gossypium
            hirsutum].
ACCESSION   XP_016687480
VERSION     XP_016687480.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831991.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687480.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="putative homeobox-leucine zipper protein
                     ATHB-51"
                     /calculated_mol_wt=36657
     Region          152..205
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          207..241
                     /region_name="HALZ"
                     /note="Homeobox associated leucine zipper; pfam02183"
                     /db_xref="CDD:460477"
     CDS             1..315
                     /gene="LOC107905345"
                     /coded_by="XM_016831991.2:46..993"
                     /db_xref="GeneID:107905345"
ORIGIN      
        1 mhpksevkpl qppppfslpl thcctpksqc frhyplltit fhaslsslfg lccsglvslg
       61 gpfiyiyiyy krrilfgiyw reskkemdwn dtfrpfvsrp epslnflysn ynydqypgme
      121 mkqhqgfmev gnemvlpgln knsfnnnvnq dkkkrltsdq ldsleksfqe eikldpdrkm
      181 klsrelglqp rqiavwfqnr rarwkakqle rlydslkqkf daisrekqkl qdevmklkgi
      241 lreqvtrnqv stvyteisge etvestsirs snkpkiagnn hhphpvaacn ylfnvdeynp
      301 vsspywgtvq lpsyp
//
LOCUS       XP_016687479             164 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L24 [Gossypium hirsutum].
ACCESSION   XP_016687479
VERSION     XP_016687479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831990.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..164
                     /product="60S ribosomal protein L24"
                     /calculated_mol_wt=18362
     Region          4..66
                     /region_name="Ribosomal_L24e"
                     /note="Ribosomal protein L24e; pfam01246"
                     /db_xref="CDD:460131"
     CDS             1..164
                     /gene="LOC107905344"
                     /coded_by="XM_016831990.2:177..671"
                     /db_xref="GeneID:107905344"
ORIGIN      
        1 mvlktelcrf sgakiypgkg irfvrgdsqv flfsnskckr yfhnrlkpsk ltwtamyrkq
       61 hkkdiaqeav kkrrraakkp ysrsivgatl eviqkkrsek pevrdaarea alreikerik
      121 ktkdekkakk aevaakqqkt qgkgnvpkgg apkgpklggg ggkr
//
LOCUS       XP_040943573             625 aa            linear   PLN 06-AUG-2024
DEFINITION  SRSF protein kinase 2 [Gossypium hirsutum].
ACCESSION   XP_040943573
VERSION     XP_040943573.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087639.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..625
                     /product="SRSF protein kinase 2"
                     /calculated_mol_wt=70701
     Region          36..483
                     /region_name="STKc_SRPK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Serine-aRginine Protein Kinase; cd14136"
                     /db_xref="CDD:271038"
     Site            order(53..57,61,74,76,90,110,130..133,136,138..139,178,
                     180,182..183,185,327,330,339,341..344,346,383)
                     /site_type="active"
                     /db_xref="CDD:271038"
     Site            order(53..57,61,74,76,110,130..133,136,178,180,182..183,
                     185,327)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271038"
     Site            order(90,138,178,180,330,339,341..344,346,383)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271038"
     Site            order(146..147,376,378,380,389,394,397..398,401..402,430,
                     434,436,445..446)
                     /site_type="other"
                     /note="kinase-docking site [polypeptide binding]"
                     /db_xref="CDD:271038"
     Site            326..346
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271038"
     CDS             1..625
                     /gene="LOC121214031"
                     /coded_by="XM_041087639.1:253..2130"
                     /db_xref="GeneID:121214031"
ORIGIN      
        1 mgdkkeeeew sgsessdyts edegtedyrr ggyhavrigd tfkngryvvq sklgwgnfst
       61 vwlawdtqls ryvalkvqks akhyteaamd eitilqqiad gdkedkkcvv klldhfkhsg
      121 pngqhvcmvf eylgdnlltl ikysdyrgmp ihrvkeicfh ilagldylhr elsiihtdlk
      181 penillllmi dpskdprksg tplvlpnnky kmlldslnst ngdlsrnqkk kirrkakraa
      241 qgcvekevsa aagmdpetsg aaesslseyt nvdsieerpa cssnanrlsd adttkdtdqa
      301 svgnkrgsrs trrkllasvd lkcklvdfgn acwtykqftn diqtrqyrcp evilgskyst
      361 sadlwsfaci cfelatgdvl fdphsgdnfd rdedhlalmm ellgmmprki alggrysrdf
      421 fnrygdlrhi rrlrfwplnk vliekyefse qdasdmtdfl vpildfvpek rpsaaqclvh
      481 pwidagprll epsgsssqtq vavsekktke mddmeameva mgniaisads khakdhqpps
      541 kpsnaaisss ryphqsflql ldfldrnrhr krfpiqniak rrhvifryqn rdasvvqslh
      601 npgacnfvat gtkavftfsh qvnvr
//
LOCUS       XP_016687475             541 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glycosyltransferase At5g03795 [Gossypium hirsutum].
ACCESSION   XP_016687475
VERSION     XP_016687475.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831986.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687475.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..541
                     /product="probable glycosyltransferase At5g03795"
                     /calculated_mol_wt=61333
     Region          203..485
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..541
                     /gene="LOC107905341"
                     /coded_by="XM_016831986.2:254..1879"
                     /db_xref="GeneID:107905341"
ORIGIN      
        1 mngdrfkncf lptpagssst aikllmitvp lilvsfvifv lvprnsrywv yvspsgnsst
       61 gnfgavseev staaeavavs geatlnrstn ksldveaqvm eihefdetke aslnittnel
      121 nnlnisvtgv pnatislnes islplkrnrr vrtkldklea glqraraaik daknssqlld
      181 pdyvpigpmy wdakafhrsy memekqfkvf vykegeppvf hdgpcksiys megnfiyqmd
      241 vntkfrtndp ekahvfylpf svakmvrfvy lrdsrdfgpi rrtvidyvnv vsekypywnr
      301 slgadhfmla chdwgpeasf snpylgknsi ralcnantse kfnpvkdvsi pemnlrtgkl
      361 tgliggpsas rrpilaffag gvhgpirpil lehwegkdde ikvhkylpqg inyyemmrss
      421 kyclcpsgye vaspriveal yngcvpvlis ksyvppfsdv lrwksfsvvv svediprlke
      481 ilmkissrqy irmqrrvlqv rrhfefhspp krfdvfhmil hsiwlrrlnv rvsdgndvmp
      541 n
//
LOCUS       XP_040943574             883 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g03800 [Gossypium
            hirsutum].
ACCESSION   XP_040943574
VERSION     XP_040943574.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087640.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..883
                     /product="pentatricopeptide repeat-containing protein
                     At5g03800"
                     /calculated_mol_wt=99295
     Region          106..881
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          108..130
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          137..164
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          170..235
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          312..335
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          341..368
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          370..399
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          440..464
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          475..502
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          509..538
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          546..573
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          575..604
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          610..641
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          648..674
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..883
                     /gene="LOC121214032"
                     /coded_by="XM_041087640.1:50..2701"
                     /db_xref="GeneID:121214032"
ORIGIN      
        1 mstiihpqnh pvplphhrhl fptkpppypp cssslsfpkp kshhhrplll asttavscht
       61 lyykphicnd vnslltllnl svqysdaela kavhacslkl qedthlgnsl vlaylklglf
      121 nhslnvfasl ccpnlvtyss lisgfaksnq gskaielfmk mrtegiepne ftfvailsac
      181 irvleselgf qihglvvkmg fldstfvana lmgiywkftg nlrpvfkvfd empqrdvasw
      241 ntvisclvke gmyekafelf rvmqgigcfr adfftissil sacegsnafm kgkevhahai
      301 riglegnlsv nnvliglytq fgrvrdvavl fesmpirdvi twtqmitaym efglvdlamk
      361 vfnempeknc isynalmagf ckngeglkav klfikmveeg leltdfslss vinacalvmd
      421 vkaseqiqgf clkfgfgsnv cveaalldmc ircgrmadae kmfriwpveh dnsvvctsml
      481 cgyarngqpd eavlfflrcr legtmdldev tltsilgacg tlgfermgeq ihcyalktgf
      541 vtdlgvlnsi ismyakcgnm ndaikvfdim pvrdvvswna liaghilhrq gdealavwpa
      601 meeagiqpdt itlflvlsay rhtnldlvdd crklflsmrt dydieptsqh hasfvsvlgq
      661 wglleeaeet ienmtvepka yvwralldsc rirlnttigk rvakrilamk pqdpstyilv
      721 snlysasgrw hcsetvredm rekgfrknpa rswiihqnni hpfytrdksh pqtkdiyrgl
      781 eilvmecqka gyvpdtsfvl heveehqkke fllyhsakla atygilmtkh gepirivkni
      841 hmcgdchtfm kyvsiitkre ilvrdasgfh cfrngqccck dyw
//
LOCUS       XP_040943575             489 aa            linear   PLN 06-AUG-2024
DEFINITION  adenylosuccinate synthetase 2, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943575
VERSION     XP_040943575.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087641.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..489
                     /product="adenylosuccinate synthetase 2, chloroplastic"
                     /calculated_mol_wt=53362
     Region          64..489
                     /region_name="PLN02513"
                     /note="adenylosuccinate synthase"
                     /db_xref="CDD:178129"
     Site            order(75..82,102..106,192..194,287..288,292,302..303,
                     337..338,362..365,367,369,395,397..398,478..481)
                     /site_type="active"
                     /db_xref="CDD:349762"
     Site            order(135,167,169,182,191,199,202..210,212,269..270,273,
                     294..297,299..300,302,304,310..311,313..314,317..318,381,
                     384..387)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349762"
     CDS             1..489
                     /gene="LOC121214033"
                     /coded_by="XM_041087641.1:98..1567"
                     /db_xref="GeneID:121214033"
ORIGIN      
        1 mncsslvldp tpvatsrccy rrptlhfqhh rrnfvfcslk pvassslsva esasseslnr
       61 igslsqvsgv lgsqwgdegk gklvdilaqh fdivarcqgg anaghtiyns egkkfalhlv
      121 psgilneetl cvigngvvvh lpglfkeidg leangvsckg rilvsdrahl lfdfhqvvdg
      181 lreaelnksf igttrrgigp aysskmnrng irvsdlrhmd tfpqklhnll sdvnsrfpdf
      241 nytpevlkee venykryaer lepfiadtvh vmnesiaqkk rilveggqat mldidfgtyp
      301 fvtssspsag gictglgiap rvvgdligvv kayttrvgsg pfpteilgqg gdilrfagqe
      361 fgtttgrprr cgwldvvalk fccqingfss lnltkldvls dlpeiklgva ykhvdgtpve
      421 sfpgdlqlle qlkveyevlp gwqsdissir nysdlpkaar qyverieelv gvpihyigvg
      481 pgrdaliyk
//
LOCUS       XP_040943576             357 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: UDP-glucose 4-epimerase GEPI48 [Gossypium
            hirsutum].
ACCESSION   XP_040943576
VERSION     XP_040943576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087642.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..357
                     /product="LOW QUALITY PROTEIN: UDP-glucose 4-epimerase
                     GEPI48"
                     /calculated_mol_wt=38921
     Region          1..357
                     /region_name="PLN02240"
                     /note="UDP-glucose 4-epimerase"
                     /db_xref="CDD:177883"
     Site            order(9,11..14,33..38,62..64,85..87,89,104,136..138,162,
                     166,190..191,193)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187558"
     Site            order(95,97..99,102..103,106..107,110..111,113..114,117,
                     161,164,168,171..172,174..176)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187558"
     Site            order(105,138,162,166)
                     /site_type="active"
                     /db_xref="CDD:187558"
     Site            order(138..140,162,190..192,211..213,228..231,242,244,246,
                     283,306,309)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187558"
     CDS             1..357
                     /gene="LOC107905337"
                     /coded_by="XM_041087642.1:610..1683"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:107905337"
ORIGIN      
        1 msktilvtgg agyigshtvl qlllsgyktv vvdnldnssd valkrvkela gefgrnlsfy
       61 qvdlrdraai qkvfaqtkfd avihfaglka vgesvskpll yhdnnivgti tllevmaahg
      121 ckixsixydt lqlvfsssat vygwpkkvpc teefplsavn pygrtklfie eicrdlrnsd
      181 sqwkiillry fnpvgahpsg higedprgtp nnlmpfvqqv avgrrqaltv fgkdystkdg
      241 tgvrdyihvv dladghiaal kklsdpkigc evynlgtgkg tsvlemvtaf ekasgkkipl
      301 qiagrrpgda evvyasikka etelkwkaky gieemckdqw nwasknpfgy gsleskk
//
LOCUS       XP_016687466            1162 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687466
VERSION     XP_016687466.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831977.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687466.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1162
                     /product="E3 ubiquitin-protein ligase UPL7 isoform X1"
                     /calculated_mol_wt=130539
     Region          794..1160
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(800,829,845,906,1082,1124..1125,1128..1132,1152,
                     1159)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(934,937..938,940..941,944,951,953,957,959,965,970,
                     987,991)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1162
                     /gene="LOC107905334"
                     /coded_by="XM_016831977.2:99..3587"
                     /db_xref="GeneID:107905334"
ORIGIN      
        1 meeprkqqvs lrgasareis rdallekvsq erkhrnyark aasasifiqk vwrsygetrk
       61 vamkfqeewe slvkyqagil tgelisssvl rpfiffitrl sirqrkilar elkcmqtcfg
      121 illesinstd srknicsliv gtteqrrtsm yqmrklislc sfilsecdts ragsqdivvl
      181 tslalrfvvv ltdlkswkiv ndenigdada avknfvsfmg syrsglyasl rryisrmdas
      241 fsakvksivq tddkflisas aitiairpfs lttfnpadci kfdvhsaael yclylltipw
      301 ltqrvpavll palkhkstll pclqlllisk dkivrmmsdi dqfsrdcsln avppigwala
      361 niiglaagse ndflhsealn qgleyasyvh vvtiladnll swlhdagwne kgnqnlegnd
      421 gayeppvsmq enkticgslk tsfidlirpv cqqwhlkkll eksktyaytd esktkilppn
      481 nleslenlrl ldiayfysym lrifaafnpm igplpilnml sftpgflgnl wgvlessifl
      541 gnshtigdan yarskvsgkk kgvdkklkqa sndrvskwan vlqkltgksq vdfsdpaddh
      601 qvdedasdvw dveplrhgpr giskdmscll hlfcatyshl llvlddiefy ekqvpftleq
      661 qqriasmlnt lvynglscsv gqqnaslmds avrclhliye rdcrhqfcpp alwlsparrs
      721 rppiavaart hevvsanirs edavvvhstg svitsmphaf pfqervqmfr efismdkvsr
      781 rmagevagpg srsieivirr ghviedgfrq lnslgsrlks sihvsfvsec glpeagldyg
      841 glskefltdi skaafapeyg lfsqtstsdr llipnaaarf lengiqmief lgrvvgkaly
      901 egilldysfs hvfvqkllgr ysfldelstl dpelyrnlmy vkhyegnved lcldftvtee
      961 sfgkrhviel kpggkdvcvt nankmqyvha mafyklnrqm lpfsnafyrg ltdlispswl
     1021 klfnasefnq llsggdhdid vddlknntry tggysegsrt vklfwevmnd fepkercmll
     1081 kfvtscsrap llgfkylqpa ftihkvasda plwaaiggsd verlpsastc yntlklptyk
     1141 rsstlkaklr yainsnagfe ls
//
LOCUS       XP_016687467            1162 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687467
VERSION     XP_016687467.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831978.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687467.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1162
                     /product="E3 ubiquitin-protein ligase UPL7 isoform X1"
                     /calculated_mol_wt=130539
     Region          794..1160
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(800,829,845,906,1082,1124..1125,1128..1132,1152,
                     1159)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(934,937..938,940..941,944,951,953,957,959,965,970,
                     987,991)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1162
                     /gene="LOC107905334"
                     /coded_by="XM_016831978.2:99..3587"
                     /db_xref="GeneID:107905334"
ORIGIN      
        1 meeprkqqvs lrgasareis rdallekvsq erkhrnyark aasasifiqk vwrsygetrk
       61 vamkfqeewe slvkyqagil tgelisssvl rpfiffitrl sirqrkilar elkcmqtcfg
      121 illesinstd srknicsliv gtteqrrtsm yqmrklislc sfilsecdts ragsqdivvl
      181 tslalrfvvv ltdlkswkiv ndenigdada avknfvsfmg syrsglyasl rryisrmdas
      241 fsakvksivq tddkflisas aitiairpfs lttfnpadci kfdvhsaael yclylltipw
      301 ltqrvpavll palkhkstll pclqlllisk dkivrmmsdi dqfsrdcsln avppigwala
      361 niiglaagse ndflhsealn qgleyasyvh vvtiladnll swlhdagwne kgnqnlegnd
      421 gayeppvsmq enkticgslk tsfidlirpv cqqwhlkkll eksktyaytd esktkilppn
      481 nleslenlrl ldiayfysym lrifaafnpm igplpilnml sftpgflgnl wgvlessifl
      541 gnshtigdan yarskvsgkk kgvdkklkqa sndrvskwan vlqkltgksq vdfsdpaddh
      601 qvdedasdvw dveplrhgpr giskdmscll hlfcatyshl llvlddiefy ekqvpftleq
      661 qqriasmlnt lvynglscsv gqqnaslmds avrclhliye rdcrhqfcpp alwlsparrs
      721 rppiavaart hevvsanirs edavvvhstg svitsmphaf pfqervqmfr efismdkvsr
      781 rmagevagpg srsieivirr ghviedgfrq lnslgsrlks sihvsfvsec glpeagldyg
      841 glskefltdi skaafapeyg lfsqtstsdr llipnaaarf lengiqmief lgrvvgkaly
      901 egilldysfs hvfvqkllgr ysfldelstl dpelyrnlmy vkhyegnved lcldftvtee
      961 sfgkrhviel kpggkdvcvt nankmqyvha mafyklnrqm lpfsnafyrg ltdlispswl
     1021 klfnasefnq llsggdhdid vddlknntry tggysegsrt vklfwevmnd fepkercmll
     1081 kfvtscsrap llgfkylqpa ftihkvasda plwaaiggsd verlpsastc yntlklptyk
     1141 rsstlkaklr yainsnagfe ls
//
LOCUS       XP_016687465            1162 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687465
VERSION     XP_016687465.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831976.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687465.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1162
                     /product="E3 ubiquitin-protein ligase UPL7 isoform X1"
                     /calculated_mol_wt=130539
     Region          794..1160
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(800,829,845,906,1082,1124..1125,1128..1132,1152,
                     1159)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(934,937..938,940..941,944,951,953,957,959,965,970,
                     987,991)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1162
                     /gene="LOC107905334"
                     /coded_by="XM_016831976.2:112..3600"
                     /db_xref="GeneID:107905334"
ORIGIN      
        1 meeprkqqvs lrgasareis rdallekvsq erkhrnyark aasasifiqk vwrsygetrk
       61 vamkfqeewe slvkyqagil tgelisssvl rpfiffitrl sirqrkilar elkcmqtcfg
      121 illesinstd srknicsliv gtteqrrtsm yqmrklislc sfilsecdts ragsqdivvl
      181 tslalrfvvv ltdlkswkiv ndenigdada avknfvsfmg syrsglyasl rryisrmdas
      241 fsakvksivq tddkflisas aitiairpfs lttfnpadci kfdvhsaael yclylltipw
      301 ltqrvpavll palkhkstll pclqlllisk dkivrmmsdi dqfsrdcsln avppigwala
      361 niiglaagse ndflhsealn qgleyasyvh vvtiladnll swlhdagwne kgnqnlegnd
      421 gayeppvsmq enkticgslk tsfidlirpv cqqwhlkkll eksktyaytd esktkilppn
      481 nleslenlrl ldiayfysym lrifaafnpm igplpilnml sftpgflgnl wgvlessifl
      541 gnshtigdan yarskvsgkk kgvdkklkqa sndrvskwan vlqkltgksq vdfsdpaddh
      601 qvdedasdvw dveplrhgpr giskdmscll hlfcatyshl llvlddiefy ekqvpftleq
      661 qqriasmlnt lvynglscsv gqqnaslmds avrclhliye rdcrhqfcpp alwlsparrs
      721 rppiavaart hevvsanirs edavvvhstg svitsmphaf pfqervqmfr efismdkvsr
      781 rmagevagpg srsieivirr ghviedgfrq lnslgsrlks sihvsfvsec glpeagldyg
      841 glskefltdi skaafapeyg lfsqtstsdr llipnaaarf lengiqmief lgrvvgkaly
      901 egilldysfs hvfvqkllgr ysfldelstl dpelyrnlmy vkhyegnved lcldftvtee
      961 sfgkrhviel kpggkdvcvt nankmqyvha mafyklnrqm lpfsnafyrg ltdlispswl
     1021 klfnasefnq llsggdhdid vddlknntry tggysegsrt vklfwevmnd fepkercmll
     1081 kfvtscsrap llgfkylqpa ftihkvasda plwaaiggsd verlpsastc yntlklptyk
     1141 rsstlkaklr yainsnagfe ls
//
LOCUS       XP_040943577            1100 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943577
VERSION     XP_040943577.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087643.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1100
                     /product="E3 ubiquitin-protein ligase UPL7 isoform X2"
                     /calculated_mol_wt=123354
     Region          732..1098
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(738,767,783,844,1020,1062..1063,1066..1070,1090,
                     1097)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(872,875..876,878..879,882,889,891,895,897,903,908,
                     925,929)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1100
                     /gene="LOC107905334"
                     /coded_by="XM_041087643.1:159..3461"
                     /db_xref="GeneID:107905334"
ORIGIN      
        1 mkfqeewesl vkyqagiltg elisssvlrp fiffitrlsi rqrkilarel kcmqtcfgil
       61 lesinstdsr knicslivgt teqrrtsmyq mrklislcsf ilsecdtsra gsqdivvlts
      121 lalrfvvvlt dlkswkivnd enigdadaav knfvsfmgsy rsglyaslrr yisrmdasfs
      181 akvksivqtd dkflisasai tiairpfslt tfnpadcikf dvhsaaelyc lylltipwlt
      241 qrvpavllpa lkhkstllpc lqllliskdk ivrmmsdidq fsrdcslnav ppigwalani
      301 iglaagsend flhsealnqg leyasyvhvv tiladnllsw lhdagwnekg nqnlegndga
      361 yeppvsmqen kticgslkts fidlirpvcq qwhlkkllek sktyaytdes ktkilppnnl
      421 eslenlrlld iayfysymlr ifaafnpmig plpilnmlsf tpgflgnlwg vlessiflgn
      481 shtigdanya rskvsgkkkg vdkklkqasn drvskwanvl qkltgksqvd fsdpaddhqv
      541 dedasdvwdv eplrhgprgi skdmscllhl fcatyshlll vlddiefyek qvpftleqqq
      601 riasmlntlv ynglscsvgq qnaslmdsav rclhliyerd crhqfcppal wlsparrsrp
      661 piavaarthe vvsanirsed avvvhstgsv itsmphafpf qervqmfref ismdkvsrrm
      721 agevagpgsr sieivirrgh viedgfrqln slgsrlkssi hvsfvsecgl peagldyggl
      781 skefltdisk aafapeyglf sqtstsdrll ipnaaarfle ngiqmieflg rvvgkalyeg
      841 illdysfshv fvqkllgrys fldelstldp elyrnlmyvk hyegnvedlc ldftvteesf
      901 gkrhvielkp ggkdvcvtna nkmqyvhama fyklnrqmlp fsnafyrglt dlispswlkl
      961 fnasefnqll sggdhdidvd dlknntrytg gysegsrtvk lfwevmndfe pkercmllkf
     1021 vtscsrapll gfkylqpaft ihkvasdapl waaiggsdve rlpsastcyn tlklptykrs
     1081 stlkaklrya insnagfels
//
LOCUS       XP_016687468            1032 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase UPL7 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016687468
VERSION     XP_016687468.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831979.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687468.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1032
                     /product="E3 ubiquitin-protein ligase UPL7 isoform X3"
                     /calculated_mol_wt=116054
     Region          794..>1027
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cl27008"
                     /db_xref="CDD:474882"
     Site            order(934,937..938,940..941,944,951,953,957,959,965,970,
                     987,991)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1032
                     /gene="LOC107905334"
                     /coded_by="XM_016831979.2:99..3197"
                     /db_xref="GeneID:107905334"
ORIGIN      
        1 meeprkqqvs lrgasareis rdallekvsq erkhrnyark aasasifiqk vwrsygetrk
       61 vamkfqeewe slvkyqagil tgelisssvl rpfiffitrl sirqrkilar elkcmqtcfg
      121 illesinstd srknicsliv gtteqrrtsm yqmrklislc sfilsecdts ragsqdivvl
      181 tslalrfvvv ltdlkswkiv ndenigdada avknfvsfmg syrsglyasl rryisrmdas
      241 fsakvksivq tddkflisas aitiairpfs lttfnpadci kfdvhsaael yclylltipw
      301 ltqrvpavll palkhkstll pclqlllisk dkivrmmsdi dqfsrdcsln avppigwala
      361 niiglaagse ndflhsealn qgleyasyvh vvtiladnll swlhdagwne kgnqnlegnd
      421 gayeppvsmq enkticgslk tsfidlirpv cqqwhlkkll eksktyaytd esktkilppn
      481 nleslenlrl ldiayfysym lrifaafnpm igplpilnml sftpgflgnl wgvlessifl
      541 gnshtigdan yarskvsgkk kgvdkklkqa sndrvskwan vlqkltgksq vdfsdpaddh
      601 qvdedasdvw dveplrhgpr giskdmscll hlfcatyshl llvlddiefy ekqvpftleq
      661 qqriasmlnt lvynglscsv gqqnaslmds avrclhliye rdcrhqfcpp alwlsparrs
      721 rppiavaart hevvsanirs edavvvhstg svitsmphaf pfqervqmfr efismdkvsr
      781 rmagevagpg srsieivirr ghviedgfrq lnslgsrlks sihvsfvsec glpeagldyg
      841 glskefltdi skaafapeyg lfsqtstsdr llipnaaarf lengiqmief lgrvvgkaly
      901 egilldysfs hvfvqkllgr ysfldelstl dpelyrnlmy vkhyegnved lcldftvtee
      961 sfgkrhviel kpggkdvcvt nankmqyvha mafyklnrqm lpfsnafyrg ltdlispswl
     1021 klfnasefnq ad
//
LOCUS       XP_016687469             352 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g03820 [Gossypium hirsutum].
ACCESSION   XP_016687469
VERSION     XP_016687469.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831980.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="GDSL esterase/lipase At5g03820"
                     /calculated_mol_wt=37782
     Region          29..344
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(37,114,169,327,330)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(37,327,330)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(37,114,169)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..352
                     /gene="LOC107905335"
                     /coded_by="XM_016831980.2:259..1317"
                     /db_xref="GeneID:107905335"
ORIGIN      
        1 mrasseflat lvlvlvsvss vahgdplvpa liifgdsvvd vgnnnnlntl iksnfppygr
       61 dfvnhrptgr fcngklatdf taeylgftsy ppaylsrdai gnalltganf asaasglyds
      121 tanlyraitl tqqlnyyrey qtklvnmagn nganniisga ihllsagssd yiqnyyinpl
      181 vsriytpdqf sdilirsytt fiqnlyglga rrigvttlpp tgclpaaitl fgagsnqcva
      241 rlnqdaiafn nklnstslsl qdrlpglklv vfdiyqplld mvtkpsdngf fesrraccgt
      301 gtletsllcn sralgtcsna tsyvfwdgfh pseaanqvla gdllaqgvsl is
//
LOCUS       XP_040943578             490 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase 36 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943578
VERSION     XP_040943578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087644.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="aspartic proteinase 36 isoform X1"
                     /calculated_mol_wt=52604
     Region          72..>134
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Region          77..436
                     /region_name="pepsin_A_like_plant"
                     /note="Chroloplast Nucleoids DNA-binding Protease and
                     Nucellin, pepsin-like aspartic proteases from plants;
                     cd05476"
                     /db_xref="CDD:133143"
     Site            order(95..98,314..317)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133143"
     Site            order(95,314)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133143"
     Site            95..97
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133154"
     Site            95
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133154"
     Site            order(161..164,168..171)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133143"
     CDS             1..490
                     /gene="LOC121214034"
                     /coded_by="XM_041087644.1:237..1709"
                     /db_xref="GeneID:121214034"
ORIGIN      
        1 mralrlllvl gfltvlsvas cvvipleraf plngrvelsq lvardqlrhs rmlqglvggv
       61 vdfsvqgtsd pylvglyftr vklgsppref nvqidtgsdi lwvtcssctd cpqssglgiq
      121 lslfdttsss sarmvpcsdp mcsseyqtta tqcsqsnqcs ysfqygdgsg tsgyyvadml
      181 sfdavmgqss ianssalivf gnrcstyqsg dltktdkavd gifgfgrgdl svisqlssrg
      241 itprvfshcl kgdgsgggim vlgaimepsi vysplvpsqp hynlmlqsia vngqllqidp
      301 svfatssnrg tivdsgttla ylvqeaydpf viaitatvsp svtptiskgn qcylvaasvs
      361 qifppvslnf asgasmmlkp edylirsgfy dgatmwcigf qkvqggisil gdlvlkdkif
      421 vydlahqrig wanydcslsv nvsitsskdf inegqlsvss stkemlfkli plsfitfliq
      481 llelvefqfl
//
LOCUS       XP_040943579             488 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase 36 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943579
VERSION     XP_040943579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087645.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..488
                     /product="aspartic proteinase 36 isoform X2"
                     /calculated_mol_wt=52334
     Region          72..>134
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Region          77..434
                     /region_name="pepsin_A_like_plant"
                     /note="Chroloplast Nucleoids DNA-binding Protease and
                     Nucellin, pepsin-like aspartic proteases from plants;
                     cd05476"
                     /db_xref="CDD:133143"
     Site            order(95..98,312..315)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133143"
     Site            order(95,312)
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:133143"
     Site            95..97
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133154"
     Site            95
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133154"
     Site            order(161..164,168..171)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133143"
     CDS             1..488
                     /gene="LOC121214034"
                     /coded_by="XM_041087645.1:237..1703"
                     /db_xref="GeneID:121214034"
ORIGIN      
        1 mralrlllvl gfltvlsvas cvvipleraf plngrvelsq lvardqlrhs rmlqglvggv
       61 vdfsvqgtsd pylvglyftr vklgsppref nvqidtgsdi lwvtcssctd cpqssglgiq
      121 lslfdttsss sarmvpcsdp mcsseyqtta tqcsqsnqcs ysfqygdgsg tsgyyvadml
      181 sfdavmgqss ianssalivf gcstyqsgdl tktdkavdgi fgfgrgdlsv isqlssrgit
      241 prvfshclkg dgsgggimvl gaimepsivy splvpsqphy nlmlqsiavn gqllqidpsv
      301 fatssnrgti vdsgttlayl vqeaydpfvi aitatvspsv tptiskgnqc ylvaasvsqi
      361 fppvslnfas gasmmlkped ylirsgfydg atmwcigfqk vqggisilgd lvlkdkifvy
      421 dlahqrigwa nydcslsvnv sitsskdfin egqlsvssst kemlfklipl sfitfliqll
      481 elvefqfl
//
LOCUS       XP_016687463             236 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016687463
VERSION     XP_016687463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831974.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..236
                     /product="peptidyl-prolyl cis-trans isomerase FKBP16-4,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=25311
     Region          125..220
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..236
                     /gene="LOC107905333"
                     /coded_by="XM_016831974.2:60..770"
                     /db_xref="GeneID:107905333"
ORIGIN      
        1 melslfsyhq nsfsllhkpf fslpisgkrv pkrdpfllqc hctlssssnd ddnikaaivs
       61 lqhegrrvvl gslltaaaam yisdvaeaas tsrralrgak ipetefttlp nglkyydlkv
      121 gsglkavkgs rvavhyvakw rgvtfmtsrq glgvgggtpy gfdigqserg nvlkgldlgv
      181 egmrvggqrl livppelayg kkgvqeippn atieldvell sikqspfgtp vkvieg
//
LOCUS       XP_016687464             220 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016687464
VERSION     XP_016687464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831975.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="peptidyl-prolyl cis-trans isomerase FKBP16-4,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=23642
     Region          125..212
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..220
                     /gene="LOC107905333"
                     /coded_by="XM_016831975.2:60..722"
                     /db_xref="GeneID:107905333"
ORIGIN      
        1 melslfsyhq nsfsllhkpf fslpisgkrv pkrdpfllqc hctlssssnd ddnikaaivs
       61 lqhegrrvvl gslltaaaam yisdvaeaas tsrralrgak ipetefttlp nglkyydlkv
      121 gsglkavkgs rvavhyvakw rgvtfmtsrq glgvgggtpy gfdigqserg nvlkgldlgv
      181 egmrvggqrl livppelayg kkgvqeippn atienscksy
//
LOCUS       XP_040943580            1045 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943580
VERSION     XP_040943580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087646.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1045
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=115726
     Region          303..358
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          596..648
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          663..702
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(668..674,676,684,692..697)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          753..802
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(753,769..772,776,800)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277018"
     CDS             1..1045
                     /gene="LOC121214035"
                     /coded_by="XM_041087646.1:283..3420"
                     /db_xref="GeneID:121214035"
ORIGIN      
        1 mkreldygvd gslgqtreav ihsqtqasss sscckrvnst qvngyivytr vkksridcrv
       61 senldnqklk dfnepinsfk vslidedqen riladangvn nnliesrsgn gnlagdkvvi
      121 envvdeslvv rdivkggpfi ealieeshti genaivgnlv veaigidgkp vvqscqsmde
      181 letrpvekgg fdssdgnddd lllktlrrpk kslwgpkvea eeslgceqqn venvlvsnfg
      241 geeaaeesgl ttprknlelk mskkislnkc pmtvkelfdt glldgvpvvy mgtissktag
      301 lrgiitdggi lcscslckgr rvvppsqfei hackqykraa qyicfengks llevlracrr
      361 gplhtleati qniiravpeq kcftcrrckg sfpvihvgqv gplcnscvel kksqfitmss
      421 psvgtrsqep vsmlqsfgsa slsvspqnrs qrkkanksse ldltsnspqc ssssislqnr
      481 rpwkttrkfi vgasyfrlvi srltkpglft kslksasvhi ssqdkghwrt kkkpvkpvlm
      541 skmfkgassp iyspngsqwk mttkdqrlhk lvfeedglpd gtevayyarg qrllegykkg
      601 fgiicrccnc evspsqfeah agwasrrkpy ayiytsngvs lhelaislsk grlysakdnd
      661 vaciicadgg nlllcdgcpr afhkecaslp tiphgrwyck ycqnmlmrek caehnanaaa
      721 agrilgvdai eqitsrcvri vknietelsg ctlcracdfs ksgfgprtvi lcdqcekeyh
      781 igclrthkma dlreipkgkw fccsdcgrih stlqkllihg aerlpdslld vlkkkyaekg
      841 ldadinidvr wrllsskfas petrlllsqa vgifhecfnp ivdattgrdl ipcmvygrnl
      901 kgqeyggmyc avltinsfvv sagiirvfgq eiaeiplvat sianhgkgyf qllfsciekl
      961 laflnvknii lpaaeeaesi wtdkfgfkkl rpdqlseyrk sccqmvifqg tsmlqkevpi
     1021 hqlissierr elyehlnqgr sdfle
//
LOCUS       XP_040943581            1031 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943581
VERSION     XP_040943581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087647.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1031
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=114116
     Region          303..358
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          582..634
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          649..688
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(649,652,661,664,669,672,685,688)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:277014"
     Site            order(654..660,662,670,678..683)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          739..788
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(739,755..758,762,786)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..1031
                     /gene="LOC121214035"
                     /coded_by="XM_041087647.1:283..3378"
                     /db_xref="GeneID:121214035"
ORIGIN      
        1 mkreldygvd gslgqtreav ihsqtqasss sscckrvnst qvngyivytr vkksridcrv
       61 senldnqklk dfnepinsfk vslidedqen riladangvn nnliesrsgn gnlagdkvvi
      121 envvdeslvv rdivkggpfi ealieeshti genaivgnlv veaigidgkp vvqscqsmde
      181 letrpvekgg fdssdgnddd lllktlrrpk kslwgpkvea eeslgceqqn venvlvsnfg
      241 geeaaeesgl ttprknlelk mskkislnkc pmtvkelfdt glldgvpvvy mgtissktag
      301 lrgiitdggi lcscslckgr rvvppsqfei hackqykraa qyicfengks llevlracrr
      361 gplhtleati qniiravpeq kcftcrrckg sfpvihvgqv gplcnscvel kksqfitmss
      421 psvgtrsqep vsmlqsfgsa slsvspqnrs qrkkanksse ldltsnspqc ssssislqnr
      481 rpwkttrklt kpglftkslk sasvhissqd kghwrtkkkp vkpvlmskmf kgasspiysp
      541 ngsqwkmttk dqrlhklvfe edglpdgtev ayyargqrll egykkgfgii crccncevsp
      601 sqfeahagwa srrkpyayiy tsngvslhel aislskgrly sakdndvaci icadggnlll
      661 cdgcprafhk ecaslptiph grwyckycqn mlmrekcaeh nanaaaagri lgvdaieqit
      721 srcvrivkni etelsgctlc racdfsksgf gprtvilcdq cekeyhigcl rthkmadlre
      781 ipkgkwfccs dcgrihstlq kllihgaerl pdslldvlkk kyaekgldad inidvrwrll
      841 sskfaspetr lllsqavgif hecfnpivda ttgrdlipcm vygrnlkgqe yggmycavlt
      901 insfvvsagi irvfgqeiae iplvatsian hgkgyfqllf sciekllafl nvkniilpaa
      961 eeaesiwtdk fgfkklrpdq lseyrksccq mvifqgtsml qkevpihqli ssierrelye
     1021 hlnqgrsdfl e
//
LOCUS       XP_040943582            1025 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943582
VERSION     XP_040943582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087648.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1025
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=113438
     Region          303..358
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          <592..628
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          643..682
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(648..654,656,664,672..677)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          733..782
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(733,749..752,756,780)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277018"
     CDS             1..1025
                     /gene="LOC121214035"
                     /coded_by="XM_041087648.1:283..3360"
                     /db_xref="GeneID:121214035"
ORIGIN      
        1 mkreldygvd gslgqtreav ihsqtqasss sscckrvnst qvngyivytr vkksridcrv
       61 senldnqklk dfnepinsfk vslidedqen riladangvn nnliesrsgn gnlagdkvvi
      121 envvdeslvv rdivkggpfi ealieeshti genaivgnlv veaigidgkp vvqscqsmde
      181 letrpvekgg fdssdgnddd lllktlrrpk kslwgpkvea eeslgceqqn venvlvsnfg
      241 geeaaeesgl ttprknlelk mskkislnkc pmtvkelfdt glldgvpvvy mgtissktag
      301 lrgiitdggi lcscslckgr rvvppsqfei hackqykraa qyicfengks llevlracrr
      361 gplhtleati qniiravpeq kcftcrrckg sfpvihvgqv gplcnscvel kksqfitmss
      421 psvgtrsqep vsmlqsfgsa slsvspqnrs qrkkanksse ldltsnspqc ssssislqnr
      481 rpwkttrkfi vgasyfrlvi srltkpglft kslksasvhi ssqdkghwrt kkkpvkpvlm
      541 skmfkgassp iyspngsqwk mttkdqrlhk lvfeedglpd gtevayyarg qvspsqfeah
      601 agwasrrkpy ayiytsngvs lhelaislsk grlysakdnd vaciicadgg nlllcdgcpr
      661 afhkecaslp tiphgrwyck ycqnmlmrek caehnanaaa agrilgvdai eqitsrcvri
      721 vknietelsg ctlcracdfs ksgfgprtvi lcdqcekeyh igclrthkma dlreipkgkw
      781 fccsdcgrih stlqkllihg aerlpdslld vlkkkyaekg ldadinidvr wrllsskfas
      841 petrlllsqa vgifhecfnp ivdattgrdl ipcmvygrnl kgqeyggmyc avltinsfvv
      901 sagiirvfgq eiaeiplvat sianhgkgyf qllfsciekl laflnvknii lpaaeeaesi
      961 wtdkfgfkkl rpdqlseyrk sccqmvifqg tsmlqkevpi hqlissierr elyehlnqgr
     1021 sdfle
//
LOCUS       XP_040943583            1011 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943583
VERSION     XP_040943583.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087649.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1011
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=111828
     Region          303..358
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          <578..614
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          629..668
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(629,632,641,644,649,652,665,668)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:277014"
     Site            order(634..640,642,650,658..663)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          719..768
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(719,735..738,742,766)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..1011
                     /gene="LOC121214035"
                     /coded_by="XM_041087649.1:283..3318"
                     /db_xref="GeneID:121214035"
ORIGIN      
        1 mkreldygvd gslgqtreav ihsqtqasss sscckrvnst qvngyivytr vkksridcrv
       61 senldnqklk dfnepinsfk vslidedqen riladangvn nnliesrsgn gnlagdkvvi
      121 envvdeslvv rdivkggpfi ealieeshti genaivgnlv veaigidgkp vvqscqsmde
      181 letrpvekgg fdssdgnddd lllktlrrpk kslwgpkvea eeslgceqqn venvlvsnfg
      241 geeaaeesgl ttprknlelk mskkislnkc pmtvkelfdt glldgvpvvy mgtissktag
      301 lrgiitdggi lcscslckgr rvvppsqfei hackqykraa qyicfengks llevlracrr
      361 gplhtleati qniiravpeq kcftcrrckg sfpvihvgqv gplcnscvel kksqfitmss
      421 psvgtrsqep vsmlqsfgsa slsvspqnrs qrkkanksse ldltsnspqc ssssislqnr
      481 rpwkttrklt kpglftkslk sasvhissqd kghwrtkkkp vkpvlmskmf kgasspiysp
      541 ngsqwkmttk dqrlhklvfe edglpdgtev ayyargqvsp sqfeahagwa srrkpyayiy
      601 tsngvslhel aislskgrly sakdndvaci icadggnlll cdgcprafhk ecaslptiph
      661 grwyckycqn mlmrekcaeh nanaaaagri lgvdaieqit srcvrivkni etelsgctlc
      721 racdfsksgf gprtvilcdq cekeyhigcl rthkmadlre ipkgkwfccs dcgrihstlq
      781 kllihgaerl pdslldvlkk kyaekgldad inidvrwrll sskfaspetr lllsqavgif
      841 hecfnpivda ttgrdlipcm vygrnlkgqe yggmycavlt insfvvsagi irvfgqeiae
      901 iplvatsian hgkgyfqllf sciekllafl nvkniilpaa eeaesiwtdk fgfkklrpdq
      961 lseyrksccq mvifqgtsml qkevpihqli ssierrelye hlnqgrsdfl e
//
LOCUS       XP_040943584            1031 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943584
VERSION     XP_040943584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087650.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1031
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=113747
     Region          303..358
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          582..634
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          649..688
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(649,652,661,664,669,672,685,688)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:277014"
     Site            order(654..660,662,670,678..683)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          739..788
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(739,755..758,762,786)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..1031
                     /gene="LOC121214036"
                     /coded_by="XM_041087650.1:307..3402"
                     /db_xref="GeneID:121214036"
ORIGIN      
        1 mkreldygvd gslgqtreav tqsqtqasss sssckrvnni qvngyivytr vkksrincrv
       61 sensdsekle vfnkpingvk vslidedqen ktladtsgvn nnlnegrsgn gnvagdkvvv
      121 envvdeslvv rdivkggpli ealveeshti genaivgnlv veaigidgkp vvqssqsmde
      181 letclvekrg fdssdadddd lllktlrrpk ksllrpkvet eeslvceeqn venvlvsnsg
      241 geeaaeesgl ttprknlelk mskkislnkc pmtvkelfdt glldgvpvvy mgtissktag
      301 lrgiitdggi lcscslckgr rvvppsqfei hackqykraa qyicfengks llevlracrr
      361 gplhtleati qniiravpeq kcftcrrckg sfpvihvgqv gplcnscvel kksqcitmss
      421 psvgtrsqep vsmlqsfvsa plsispqnrs qrkkasksse ldltsnspqc ssssissqnr
      481 rpwkttrklt kpglftkslk sapvhissqd kgqwrtkkkt vkpvlmsktf kgasspiysp
      541 ngsqwkkttk dqqlhklvfe edglpdgtev ayyargqrll egykkgfgii crccncevsp
      601 sqfeahagwa srrkpyahiy tsngvslhel aislskgrly sakgndvaci icadggnlll
      661 cdgcprafhk ecaslptiph grwyckycqn mfmrekcaeh nanaaaagri lgvdaieqit
      721 rrcirivkni eaelsgcalc racdfsksgf gprtvilcdq cekeyhigcl rthkmadlre
      781 ipkgkwfccs dcgrihstlq kllihgaerl pdslldvlkk kyvekgldad inidvrwrll
      841 sgkfaspetr lllsqavgif hecfnpivda atgrdlipcm vygrnlkgqe yggmycavlt
      901 insfvvsagi irvfgqeiae iplvatsman hgkgyfqllf sciekllafl nvknivlpaa
      961 eeaesiwtdk fgfkklrpdq lseyrksccq mvifqgtsml qkevptnqlv ssiertelyk
     1021 hmnqgrsyfl e
//
LOCUS       XP_040943585            1011 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943585
VERSION     XP_040943585.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087651.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1011
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=111460
     Region          303..358
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          <578..614
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          629..668
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(629,632,641,644,649,652,665,668)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:277014"
     Site            order(634..640,642,650,658..663)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          719..768
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(719,735..738,742,766)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..1011
                     /gene="LOC121214036"
                     /coded_by="XM_041087651.1:307..3342"
                     /db_xref="GeneID:121214036"
ORIGIN      
        1 mkreldygvd gslgqtreav tqsqtqasss sssckrvnni qvngyivytr vkksrincrv
       61 sensdsekle vfnkpingvk vslidedqen ktladtsgvn nnlnegrsgn gnvagdkvvv
      121 envvdeslvv rdivkggpli ealveeshti genaivgnlv veaigidgkp vvqssqsmde
      181 letclvekrg fdssdadddd lllktlrrpk ksllrpkvet eeslvceeqn venvlvsnsg
      241 geeaaeesgl ttprknlelk mskkislnkc pmtvkelfdt glldgvpvvy mgtissktag
      301 lrgiitdggi lcscslckgr rvvppsqfei hackqykraa qyicfengks llevlracrr
      361 gplhtleati qniiravpeq kcftcrrckg sfpvihvgqv gplcnscvel kksqcitmss
      421 psvgtrsqep vsmlqsfvsa plsispqnrs qrkkasksse ldltsnspqc ssssissqnr
      481 rpwkttrklt kpglftkslk sapvhissqd kgqwrtkkkt vkpvlmsktf kgasspiysp
      541 ngsqwkkttk dqqlhklvfe edglpdgtev ayyargqvsp sqfeahagwa srrkpyahiy
      601 tsngvslhel aislskgrly sakgndvaci icadggnlll cdgcprafhk ecaslptiph
      661 grwyckycqn mfmrekcaeh nanaaaagri lgvdaieqit rrcirivkni eaelsgcalc
      721 racdfsksgf gprtvilcdq cekeyhigcl rthkmadlre ipkgkwfccs dcgrihstlq
      781 kllihgaerl pdslldvlkk kyvekgldad inidvrwrll sgkfaspetr lllsqavgif
      841 hecfnpivda atgrdlipcm vygrnlkgqe yggmycavlt insfvvsagi irvfgqeiae
      901 iplvatsman hgkgyfqllf sciekllafl nvknivlpaa eeaesiwtdk fgfkklrpdq
      961 lseyrksccq mvifqgtsml qkevptnqlv ssiertelyk hmnqgrsyfl e
//
LOCUS       XP_040943586             760 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943586
VERSION     XP_040943586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087652.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..760
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=84411
     Region          32..87
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          311..363
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          378..417
                     /region_name="PHD1_AIRE"
                     /note="PHD finger 1 found in autoimmune regulator (AIRE);
                     cd15539"
                     /db_xref="CDD:277014"
     Site            order(383..389,391,399,407..412)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277014"
     Region          468..517
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(468,484..487,491,515)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..760
                     /gene="LOC121214036"
                     /coded_by="XM_041087652.1:307..2589"
                     /db_xref="GeneID:121214036"
ORIGIN      
        1 mkreldygvd gslgqtreav tqsqtqtagl rgiitdggil cscslckgrr vvppsqfeih
       61 ackqykraaq yicfengksl levlracrrg plhtleatiq niiravpeqk cftcrrckgs
      121 fpvihvgqvg plcnscvelk ksqcitmssp svgtrsqepv smlqsfvsap lsispqnrsq
      181 rkkaskssel dltsnspqcs sssissqnrr pwkttrkltk pglftkslks apvhissqdk
      241 gqwrtkkktv kpvlmsktfk gasspiyspn gsqwkkttkd qqlhklvfee dglpdgteva
      301 yyargqrlle gykkgfgiic rccncevsps qfeahagwas rrkpyahiyt sngvslhela
      361 islskgrlys akgndvacii cadggnlllc dgcprafhke caslptiphg rwyckycqnm
      421 fmrekcaehn anaaaagril gvdaieqitr rcirivknie aelsgcalcr acdfsksgfg
      481 prtvilcdqc ekeyhigclr thkmadlrei pkgkwfccsd cgrihstlqk llihgaerlp
      541 dslldvlkkk yvekgldadi nidvrwrlls gkfaspetrl llsqavgifh ecfnpivdaa
      601 tgrdlipcmv ygrnlkgqey ggmycavlti nsfvvsagii rvfgqeiaei plvatsmanh
      661 gkgyfqllfs ciekllafln vknivlpaae eaesiwtdkf gfkklrpdql seyrksccqm
      721 vifqgtsmlq kevptnqlvs siertelykh mnqgrsyfle
//
LOCUS       XP_040943587             825 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-phosphate 5-kinase 9 [Gossypium hirsutum].
ACCESSION   XP_040943587
VERSION     XP_040943587.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087653.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="phosphatidylinositol 4-phosphate 5-kinase 9"
                     /calculated_mol_wt=92922
     Region          53..819
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..825
                     /gene="LOC107905327"
                     /coded_by="XM_041087653.1:645..3122"
                     /db_xref="GeneID:107905327"
ORIGIN      
        1 msglvvtvgn veeglsraer tksldaiidk dngciltngd anhssetagf rvgelllpng
       61 dsysgsllgn mpegqgkyvw qggcvyegew rrgmrhgigk iqwpsgtvyd gefsggymhg
      121 tgtyigsnkl tykgrwklsl khglgyqvyp ngdgfegswm qgtpegpgky twangnvylg
      181 nmkggkmsgk gtltwtngds fegswlngmm hgfgvytwrd ggcyvgtwtr glkdgkgsfy
      241 pqgnrlpasq evylnalrkr gllpdlrkqn hshihhaasv dmgsvkvggn rvsnrnsdkl
      301 segnllnlqq srnrnvsler rwslevsiek vighdsslel sdsfkegren gsetnapile
      361 reymqgvlis elvlnnsfsp ssrrakrrqk klakevkrpg eaiikghrsy dlmlslqlgi
      421 rytvgkitpv qrrevrasdf gprasfwmnf pkvgsqltpt hqsddfkwkd ycpmvfrnlr
      481 emfkidaady mmsicgndal relsspgksg sifflsqddr fmiktlrkse vkvllrmlpn
      541 yhhhvrsyen tlitkffglh rikpssgqkf rfvvmgnmfc telrihrryd lkgssqgrsa
      601 dnveidentt lkdldlnycf ylepswrdal lrqieidrkf leaqcimdys lllgvhyrap
      661 qhlrslmsyn rtdglgsvae eeedeitnyp qglvlvprgt ddnsvvagph irgrllrasa
      721 vgdeevdlll pgtarlqiql gvnmparaeq ipgkeenmfh esydvvlylg iidilqeynm
      781 tkkiehayks lqfdslsisa vdptfyserf lqfiqkvfpl nsmkt
//
LOCUS       XP_040943588             825 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-phosphate 5-kinase 9 [Gossypium hirsutum].
ACCESSION   XP_040943588
VERSION     XP_040943588.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087654.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="phosphatidylinositol 4-phosphate 5-kinase 9"
                     /calculated_mol_wt=92922
     Region          53..819
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..825
                     /gene="LOC107905327"
                     /coded_by="XM_041087654.1:553..3030"
                     /db_xref="GeneID:107905327"
ORIGIN      
        1 msglvvtvgn veeglsraer tksldaiidk dngciltngd anhssetagf rvgelllpng
       61 dsysgsllgn mpegqgkyvw qggcvyegew rrgmrhgigk iqwpsgtvyd gefsggymhg
      121 tgtyigsnkl tykgrwklsl khglgyqvyp ngdgfegswm qgtpegpgky twangnvylg
      181 nmkggkmsgk gtltwtngds fegswlngmm hgfgvytwrd ggcyvgtwtr glkdgkgsfy
      241 pqgnrlpasq evylnalrkr gllpdlrkqn hshihhaasv dmgsvkvggn rvsnrnsdkl
      301 segnllnlqq srnrnvsler rwslevsiek vighdsslel sdsfkegren gsetnapile
      361 reymqgvlis elvlnnsfsp ssrrakrrqk klakevkrpg eaiikghrsy dlmlslqlgi
      421 rytvgkitpv qrrevrasdf gprasfwmnf pkvgsqltpt hqsddfkwkd ycpmvfrnlr
      481 emfkidaady mmsicgndal relsspgksg sifflsqddr fmiktlrkse vkvllrmlpn
      541 yhhhvrsyen tlitkffglh rikpssgqkf rfvvmgnmfc telrihrryd lkgssqgrsa
      601 dnveidentt lkdldlnycf ylepswrdal lrqieidrkf leaqcimdys lllgvhyrap
      661 qhlrslmsyn rtdglgsvae eeedeitnyp qglvlvprgt ddnsvvagph irgrllrasa
      721 vgdeevdlll pgtarlqiql gvnmparaeq ipgkeenmfh esydvvlylg iidilqeynm
      781 tkkiehayks lqfdslsisa vdptfyserf lqfiqkvfpl nsmkt
//
LOCUS       XP_016687448             825 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-phosphate 5-kinase 9 [Gossypium hirsutum].
ACCESSION   XP_016687448
VERSION     XP_016687448.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831959.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687448.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="phosphatidylinositol 4-phosphate 5-kinase 9"
                     /calculated_mol_wt=92922
     Region          53..819
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..825
                     /gene="LOC107905327"
                     /coded_by="XM_016831959.2:644..3121"
                     /db_xref="GeneID:107905327"
ORIGIN      
        1 msglvvtvgn veeglsraer tksldaiidk dngciltngd anhssetagf rvgelllpng
       61 dsysgsllgn mpegqgkyvw qggcvyegew rrgmrhgigk iqwpsgtvyd gefsggymhg
      121 tgtyigsnkl tykgrwklsl khglgyqvyp ngdgfegswm qgtpegpgky twangnvylg
      181 nmkggkmsgk gtltwtngds fegswlngmm hgfgvytwrd ggcyvgtwtr glkdgkgsfy
      241 pqgnrlpasq evylnalrkr gllpdlrkqn hshihhaasv dmgsvkvggn rvsnrnsdkl
      301 segnllnlqq srnrnvsler rwslevsiek vighdsslel sdsfkegren gsetnapile
      361 reymqgvlis elvlnnsfsp ssrrakrrqk klakevkrpg eaiikghrsy dlmlslqlgi
      421 rytvgkitpv qrrevrasdf gprasfwmnf pkvgsqltpt hqsddfkwkd ycpmvfrnlr
      481 emfkidaady mmsicgndal relsspgksg sifflsqddr fmiktlrkse vkvllrmlpn
      541 yhhhvrsyen tlitkffglh rikpssgqkf rfvvmgnmfc telrihrryd lkgssqgrsa
      601 dnveidentt lkdldlnycf ylepswrdal lrqieidrkf leaqcimdys lllgvhyrap
      661 qhlrslmsyn rtdglgsvae eeedeitnyp qglvlvprgt ddnsvvagph irgrllrasa
      721 vgdeevdlll pgtarlqiql gvnmparaeq ipgkeenmfh esydvvlylg iidilqeynm
      781 tkkiehayks lqfdslsisa vdptfyserf lqfiqkvfpl nsmkt
//
LOCUS       XP_040943589             825 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol 4-phosphate 5-kinase 9 [Gossypium hirsutum].
ACCESSION   XP_040943589
VERSION     XP_040943589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087655.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..825
                     /product="phosphatidylinositol 4-phosphate 5-kinase 9"
                     /calculated_mol_wt=92922
     Region          53..819
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..825
                     /gene="LOC107905327"
                     /coded_by="XM_041087655.1:443..2920"
                     /db_xref="GeneID:107905327"
ORIGIN      
        1 msglvvtvgn veeglsraer tksldaiidk dngciltngd anhssetagf rvgelllpng
       61 dsysgsllgn mpegqgkyvw qggcvyegew rrgmrhgigk iqwpsgtvyd gefsggymhg
      121 tgtyigsnkl tykgrwklsl khglgyqvyp ngdgfegswm qgtpegpgky twangnvylg
      181 nmkggkmsgk gtltwtngds fegswlngmm hgfgvytwrd ggcyvgtwtr glkdgkgsfy
      241 pqgnrlpasq evylnalrkr gllpdlrkqn hshihhaasv dmgsvkvggn rvsnrnsdkl
      301 segnllnlqq srnrnvsler rwslevsiek vighdsslel sdsfkegren gsetnapile
      361 reymqgvlis elvlnnsfsp ssrrakrrqk klakevkrpg eaiikghrsy dlmlslqlgi
      421 rytvgkitpv qrrevrasdf gprasfwmnf pkvgsqltpt hqsddfkwkd ycpmvfrnlr
      481 emfkidaady mmsicgndal relsspgksg sifflsqddr fmiktlrkse vkvllrmlpn
      541 yhhhvrsyen tlitkffglh rikpssgqkf rfvvmgnmfc telrihrryd lkgssqgrsa
      601 dnveidentt lkdldlnycf ylepswrdal lrqieidrkf leaqcimdys lllgvhyrap
      661 qhlrslmsyn rtdglgsvae eeedeitnyp qglvlvprgt ddnsvvagph irgrllrasa
      721 vgdeevdlll pgtarlqiql gvnmparaeq ipgkeenmfh esydvvlylg iidilqeynm
      781 tkkiehayks lqfdslsisa vdptfyserf lqfiqkvfpl nsmkt
//
LOCUS       XP_016687449             205 aa            linear   PLN 06-AUG-2024
DEFINITION  poly [ADP-ribose] polymerase tankyrase [Gossypium hirsutum].
ACCESSION   XP_016687449
VERSION     XP_016687449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..205
                     /product="poly [ADP-ribose] polymerase tankyrase"
                     /calculated_mol_wt=22015
     Region          <42..>185
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          42..69
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(71,73,77..78,81..83,85..86,90,93,102,104,106,
                     110..111,114..116,118..119,123,126,142,144,146,150..151,
                     154..156,158..159,163,166,175)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          71..102
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          104..142
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          144..175
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..205
                     /gene="LOC107905329"
                     /coded_by="XM_016831960.2:86..703"
                     /db_xref="GeneID:107905329"
ORIGIN      
        1 mavpgrrngl leddeddenp lfeenvldmd leadtpphlr dlaaaaqlgd lnalrlaldn
       61 ingsidepve dgdtalhltc lygylpcvql llerganlea kdedgavplh dacaggfiei
      121 vqllldrasn sgclkrmlds vdaeddtplh haargehaev iqlllangas ptktntygki
      181 pqelaepete awrvfeaaas aqttr
//
LOCUS       XP_040943590             205 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein ZAT5 [Gossypium hirsutum].
ACCESSION   XP_040943590
VERSION     XP_040943590.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087656.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..205
                     /product="zinc finger protein ZAT5"
                     /calculated_mol_wt=22554
     Region          36..61
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     Region          103..127
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..205
                     /gene="LOC121214037"
                     /coded_by="XM_041087656.1:560..1177"
                     /db_xref="GeneID:121214037"
ORIGIN      
        1 mancllllsq gqtrkvkpps pppsepytaa aaetdvhqck tcnrcfpsfq algghrashk
       61 kfkvvndqdi nnnrnkedhr hydqfnekat tlslhitskk srvhecsicg aefssgqalg
      121 ghmrrhrtlt naptmttpat atttldtvvr tseqrkkprt vlqldlnlpa peddlhkepn
      181 nkvlslaseg kllgfsassl vdchy
//
LOCUS       XP_040943591             249 aa            linear   PLN 06-AUG-2024
DEFINITION  aquaporin TIP1-1 [Gossypium hirsutum].
ACCESSION   XP_040943591
VERSION     XP_040943591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087657.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..249
                     /product="aquaporin TIP1-1"
                     /calculated_mol_wt=25379
     Region          1..247
                     /region_name="PLN00027"
                     /note="aquaporin TIP; Provisional"
                     /db_xref="CDD:177664"
     Site            order(65,83..85,195..196,199,202)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(85..87,199..201)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..249
                     /gene="LOC121214038"
                     /coded_by="XM_041087657.1:116..865"
                     /db_xref="GeneID:121214038"
ORIGIN      
        1 mpirniavgr peeathpdal kaalaefist lifvfagsgs gmafnkltdg gattpaglva
       61 aslahgfalf vavsvganis gghvnpavtf gafvggnitl lrgilywiaq llgstvacll
      121 lkfatsglgv pafglssgvg alnafvfeiv mtfglvytvy atavdpkrgn lgviaplaig
      181 livganilag gafdgasmnp avsfgpalvs wswenhwvyw agpligggla glvyefifin
      241 qtheqlphh
//
LOCUS       XP_040943592             324 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha carbonic anhydrase 7 [Gossypium hirsutum].
ACCESSION   XP_040943592
VERSION     XP_040943592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087658.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..324
                     /product="alpha carbonic anhydrase 7"
                     /calculated_mol_wt=36587
     Region          94..316
                     /region_name="alpha_CA_prokaryotic_like"
                     /note="Carbonic anhydrase alpha, prokaryotic-like
                     subfamily. Carbonic anhydrases (CAs) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism: a nucleophilic attack of
                     a zinc-bound hydroxide ion on carbon...; cd03124"
                     /db_xref="CDD:239398"
     Site            order(149,174,176,178,182,195,267)
                     /site_type="active"
                     /db_xref="CDD:239398"
     Site            order(176,178,195)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239398"
     CDS             1..324
                     /gene="LOC121214039"
                     /coded_by="XM_041087658.1:32..1006"
                     /db_xref="GeneID:121214039"
ORIGIN      
        1 mkllgkftcy fpkktinilh nhspqtifpn ifresmgfva skrssmkgqk qpvfiplfli
       61 fsvlflcfsa svasndeeve derefdynek gekgphhwgd lkkewaackt gamqspidlt
      121 ndrvkiiaks vnleknykpa esiiknrghd islqwpdhka gsitidgiey vllqvhwhsp
      181 sehtingkry aleahmvhka adpnvksgla vsallyehgs pndflsqlis nitdmtdevq
      241 ersmgvtdpn lieidgveyy ryigsltvpp ctegviwiin kkiatvskeq vhaireavhd
      301 yaeqnarpvq thneremelh sphs
//
LOCUS       XP_016684691             279 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha carbonic anhydrase 7 [Gossypium hirsutum].
ACCESSION   XP_016684691
VERSION     XP_016684691.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829202.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..279
                     /product="alpha carbonic anhydrase 7"
                     /calculated_mol_wt=31596
     Region          47..275
                     /region_name="alpha_CA_prokaryotic_like"
                     /note="Carbonic anhydrase alpha, prokaryotic-like
                     subfamily. Carbonic anhydrases (CAs) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism: a nucleophilic attack of
                     a zinc-bound hydroxide ion on carbon...; cd03124"
                     /db_xref="CDD:239398"
     Site            order(102,128,130,132,136,149,223)
                     /site_type="active"
                     /db_xref="CDD:239398"
     Site            order(130,132,149)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239398"
     CDS             1..279
                     /gene="LOC107903159"
                     /coded_by="XM_016829202.2:88..927"
                     /db_xref="GeneID:107903159"
ORIGIN      
        1 mknqtkpafi hvllifsalf hsystsvsaq evedeqefsy seesgkgpnq wgnikkewsd
       61 cktgknqspi dipsrktkvi knpgrldmly kptefivknr ghdillkihw lksagsikin
      121 gteyflqqah whspsehaid grryalevhl vhqakdpkvk hnlavvglly kygkpdafls
      181 kllgkisatn deihekplgf vdpthidtrm ggkayyryig sltvppcteg viwsvqkqvk
      241 qvskeqvhai rvlvhdkaee narpvqplnq revelyspi
//
LOCUS       XP_016687443             481 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pectate lyase 12 [Gossypium hirsutum].
ACCESSION   XP_016687443
VERSION     XP_016687443.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831954.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..481
                     /product="probable pectate lyase 12"
                     /calculated_mol_wt=53191
     Region          144..338
                     /region_name="Amb_all"
                     /note="Amb_all domain; smart00656"
                     /db_xref="CDD:214765"
     CDS             1..481
                     /gene="LOC107905323"
                     /coded_by="XM_016831954.2:309..1754"
                     /db_xref="GeneID:107905323"
ORIGIN      
        1 mlpincivlf fllssffpft istfnltfpi phpnpnevaq evqrrvnasi srretlqttq
       61 kdisscltgn piddcwkcdp dwpnnrqrla dcaigfgqya kggkggeyyi vtdssdddav
      121 tpkpgtlrya viqeeplwiv fpsnmhvklk qelifnsykt ldgrganvhi tgggcitlqy
      181 isnviihnih ihhcyqsgea nvrsspthfg wrtesdgdgi sifgakdiwi dhcslshckd
      241 glidavmgst gitisnnffs hhnevmllgh sdeyepdsgm qvtiafnhfg eklvqrmprc
      301 rrgyihvvnn dftqwemyai ggsgnptins qgnrytaptn pnakqvtkrv dtdegdwkgw
      361 nwrsegdvmv ngaffvasge gvefkyekay svepksavli dqltmhsgvl gvggrdnnlg
      421 kwssgvngdg sdfgsgeded ddysddmsgs nipfstaflp lfiamssfll lcfepitspm
      481 l
//
LOCUS       XP_016687442             493 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' beta isoform [Gossypium hirsutum].
ACCESSION   XP_016687442
VERSION     XP_016687442.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831953.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' beta isoform"
                     /calculated_mol_wt=56707
     Region          29..>93
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          83..482
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..493
                     /gene="LOC107905322"
                     /coded_by="XM_016831953.2:911..2392"
                     /db_xref="GeneID:107905322"
ORIGIN      
        1 mfkkiikggh kkhsksdsid gsfhgyglpg sghpgsgsns svvvnyaswp ghnakssnpc
       61 prttlppmfa veplplfkdv avsdrqnlfl rklqiccfrl dfsntlklvr ekeikrqtll
      121 elvdfiqsgs gkitercqee mikmvvvnif rclppashen tgqeakdped eepylepswp
      181 hlqlvyelll ryivssdtdt kvakkhidht fvsklidlfg sedpreikmi lhriygkfmv
      241 hrplirkain nifyrfiyet qrhsgigell eilgsivhgf tlpmkeehkl flvraliplh
      301 kpkavsvyhq qlsycvvqfv ekdykladkv irgllkywpm incqkevlfl geleevleat
      361 qtaefqrciv plfrqiarcl nsahfqvser alflwnnehi vglvarnrqv ilpiifeale
      421 rniqhhwnea ihgltanvlk mflemdaelf decetrfeek kakardveeq remiweklad
      481 aaaerggdhm vtv
//
LOCUS       XP_016687444             408 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR10 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016687444
VERSION     XP_016687444.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687444.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..408
                     /product="ACT domain-containing protein ACR10 isoform X1"
                     /calculated_mol_wt=45871
     Region          21..91
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          115..190
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          240..314
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          332..405
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..408
                     /gene="LOC107905324"
                     /coded_by="XM_016831955.2:132..1358"
                     /db_xref="GeneID:107905324"
ORIGIN      
        1 mgilhddvvi inqskneaep svitincpdk tglgcdlcri llffgltivr gdvstdgkwc
       61 yivfwvipkp iikwdtcrwe llknrligtc pscssafgis yysselqssm vtdvfliklf
      121 cydrkglshd vtavfsklel nikklkvstt pvgtvmnlff vtdtrellht kmrqeetyea
      181 lvevmqaaii scniekvgpe vtacsqaspf lssaitndvv lrtsnnvsvt mdnsfspaht
      241 lvqivcqdhk gllydimrtl kdyniqisyg rfylkqgrkc eidlfitqad gkkiidpsmq
      301 ralssrlqme llqplrvavv srgpdtellv anpvelsskg rplvfhditl alnmlntcif
      361 laeigrhvig dqewevyrvl ldegtslstp rrkieegvwk llmgweqi
//
LOCUS       XP_016687445             404 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR10 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016687445
VERSION     XP_016687445.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831956.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687445.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..404
                     /product="ACT domain-containing protein ACR10 isoform X2"
                     /calculated_mol_wt=45468
     Region          21..87
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          111..186
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          236..310
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          328..401
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..404
                     /gene="LOC107905324"
                     /coded_by="XM_016831956.2:134..1348"
                     /db_xref="GeneID:107905324"
ORIGIN      
        1 mgilhddvvi inqskneaep svitincpdk tglgcdlcri llffgltivr gdgkwcyivf
       61 wvipkpiikw dtcrwellkn rligtcpscs safgisyyss elqssmvtdv fliklfcydr
      121 kglshdvtav fsklelnikk lkvsttpvgt vmnlffvtdt rellhtkmrq eetyealvev
      181 mqaaiiscni ekvgpevtac sqaspflssa itndvvlrts nnvsvtmdns fspahtlvqi
      241 vcqdhkglly dimrtlkdyn iqisygrfyl kqgrkceidl fitqadgkki idpsmqrals
      301 srlqmellqp lrvavvsrgp dtellvanpv elsskgrplv fhditlalnm lntciflaei
      361 grhvigdqew evyrvlldeg tslstprrki eegvwkllmg weqi
//
LOCUS       XP_016687437             514 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016687437
VERSION     XP_016687437.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831948.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=57735
     Region          <375..411
                     /region_name="IFT20"
                     /note="Intraflagellar transport complex B, subunit 20;
                     pfam14931"
                     /db_xref="CDD:464383"
     Region          423..512
                     /region_name="E_set_AMPKbeta_like_N"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; cd02859"
                     /db_xref="CDD:199889"
     Site            order(444,484,491,502..503,505,507)
                     /site_type="other"
                     /note="glycogen binding site [chemical binding]"
                     /db_xref="CDD:199889"
     CDS             1..514
                     /gene="LOC107905319"
                     /coded_by="XM_016831948.2:242..1786"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiec acyadtvyek lnetndevat qsrtgsedrl rnaddavsks
      301 ngsatvakqv appvamdylp wsydkmeaqt lnsddsredl dskttgrdti ieinhlqfll
      361 vynfnhqkel elsllkeqie kekialasmq nkaeteiqka qklvsekdae llaaeeslsg
      421 lqevqleytg dgeivevsgs fngwhhqikl dpkpssttkt plesskskiw stvlwlypgv
      481 yeikfvvdgq wtldpqrest tssricnnil rvdr
//
LOCUS       XP_016687439             509 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016687439
VERSION     XP_016687439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831950.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..509
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=57272
     Region          <370..406
                     /region_name="IFT20"
                     /note="Intraflagellar transport complex B, subunit 20;
                     pfam14931"
                     /db_xref="CDD:464383"
     Region          418..507
                     /region_name="E_set_AMPKbeta_like_N"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; cd02859"
                     /db_xref="CDD:199889"
     Site            order(439,479,486,497..498,500,502)
                     /site_type="other"
                     /note="glycogen binding site [chemical binding]"
                     /db_xref="CDD:199889"
     CDS             1..509
                     /gene="LOC107905319"
                     /coded_by="XM_016831950.2:242..1771"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiey tvyeklnetn devatqsrtg sedrlrnadd avsksngsat
      301 vakqvappva mdylpwsydk meaqtlnsdd sredldsktt grdtiieinh lqfllvynfn
      361 hqkelelsll keqiekekia lasmqnkaet eiqkaqklvs ekdaellaae eslsglqevq
      421 leytgdgeiv evsgsfngwh hqikldpkps sttktpless kskiwstvlw lypgvyeikf
      481 vvdgqwtldp qresttssri cnnilrvdr
//
LOCUS       XP_016687438             509 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016687438
VERSION     XP_016687438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831949.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..509
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X3"
                     /calculated_mol_wt=57098
     Region          <370..406
                     /region_name="IFT20"
                     /note="Intraflagellar transport complex B, subunit 20;
                     pfam14931"
                     /db_xref="CDD:464383"
     Region          418..507
                     /region_name="E_set_AMPKbeta_like_N"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; cd02859"
                     /db_xref="CDD:199889"
     Site            order(439,479,486,497..498,500,502)
                     /site_type="other"
                     /note="glycogen binding site [chemical binding]"
                     /db_xref="CDD:199889"
     CDS             1..509
                     /gene="LOC107905319"
                     /coded_by="XM_016831949.2:242..1771"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiec acyadtvyek lnetndevat qsrtgsedrl rnaddavsks
      301 ngsatvakqv appvamdylp wsydkmeaqt lnsddsredl dskttgrdti ieinhlqfll
      361 hqkelelsll keqiekekia lasmqnkaet eiqkaqklvs ekdaellaae eslsglqevq
      421 leytgdgeiv evsgsfngwh hqikldpkps sttktpless kskiwstvlw lypgvyeikf
      481 vvdgqwtldp qresttssri cnnilrvdr
//
LOCUS       XP_040943593             504 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943593
VERSION     XP_040943593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087659.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..504
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X4"
                     /calculated_mol_wt=56634
     Region          <365..401
                     /region_name="IFT20"
                     /note="Intraflagellar transport complex B, subunit 20;
                     pfam14931"
                     /db_xref="CDD:464383"
     Region          413..502
                     /region_name="E_set_AMPKbeta_like_N"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; cd02859"
                     /db_xref="CDD:199889"
     Site            order(434,474,481,492..493,495,497)
                     /site_type="other"
                     /note="glycogen binding site [chemical binding]"
                     /db_xref="CDD:199889"
     CDS             1..504
                     /gene="LOC107905319"
                     /coded_by="XM_041087659.1:292..1806"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiey tvyeklnetn devatqsrtg sedrlrnadd avsksngsat
      301 vakqvappva mdylpwsydk meaqtlnsdd sredldsktt grdtiieinh lqfllhqkel
      361 elsllkeqie kekialasmq nkaeteiqka qklvsekdae llaaeeslsg lqevqleytg
      421 dgeivevsgs fngwhhqikl dpkpssttkt plesskskiw stvlwlypgv yeikfvvdgq
      481 wtldpqrest tssricnnil rvdr
//
LOCUS       XP_016687440             465 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_016687440
VERSION     XP_016687440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831951.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..465
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X5"
                     /calculated_mol_wt=52023
     Region          423..>457
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     CDS             1..465
                     /gene="LOC107905319"
                     /coded_by="XM_016831951.2:242..1639"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiec acyadtvyek lnetndevat qsrtgsedrl rnaddavsks
      301 ngsatvakqv appvamdylp wsydkmeaqt lnsddsredl dskttgrdti ieinhlqfll
      361 vynfnhqkel elsllkeqie kekialasmq nkaeteiqka qklvsekdae llaaeeslsg
      421 lqevqleytg dgeivevsgs fngwhhqikl dpkpssttkt plesr
//
LOCUS       XP_040943594             460 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040943594
VERSION     XP_040943594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087660.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..460
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X6"
                     /calculated_mol_wt=51559
     Region          418..>452
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     CDS             1..460
                     /gene="LOC107905319"
                     /coded_by="XM_041087660.1:242..1624"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiey tvyeklnetn devatqsrtg sedrlrnadd avsksngsat
      301 vakqvappva mdylpwsydk meaqtlnsdd sredldsktt grdtiieinh lqfllvynfn
      361 hqkelelsll keqiekekia lasmqnkaet eiqkaqklvs ekdaellaae eslsglqevq
      421 leytgdgeiv evsgsfngwh hqikldpkps sttktplesr
//
LOCUS       XP_040943595             455 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 3, chloroplastic isoform X7 [Gossypium
            hirsutum].
ACCESSION   XP_040943595
VERSION     XP_040943595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087661.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..455
                     /product="protein PTST homolog 3, chloroplastic isoform
                     X7"
                     /calculated_mol_wt=50922
     Region          413..>447
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     CDS             1..455
                     /gene="LOC107905319"
                     /coded_by="XM_041087661.1:271..1638"
                     /db_xref="GeneID:107905319"
ORIGIN      
        1 maalfqfsts isfsshnpif sskpqqwisw ktheyrprrs lkicafsikr prsgrkvksn
       61 eelcndirkf vaevglpegh vpsfkelsqh grndlanivr rrgykliqkl lssspetdgf
      121 iadtsvvqkh natsdsedtf egqylksena ievvplstea fntenklvae didsddhncm
      181 rettvytsgd qmemestvle dvststllpf eenysgslsv nldqnsddss fmpeespams
      241 ileekvarfv qngdldaiey tvyeklnetn devatqsrtg sedrlrnadd avsksngsat
      301 vakqvappva mdylpwsydk meaqtlnsdd sredldsktt grdtiieinh lqfllhqkel
      361 elsllkeqie kekialasmq nkaeteiqka qklvsekdae llaaeeslsg lqevqleytg
      421 dgeivevsgs fngwhhqikl dpkpssttkt plesr
//
LOCUS       XP_016687441             260 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687441
VERSION     XP_016687441.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831952.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687441.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..260
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27970
     Region          128..260
                     /region_name="DUF4079"
                     /note="Protein of unknown function (DUF4079); pfam13301"
                     /db_xref="CDD:433100"
     CDS             1..260
                     /gene="LOC107905320"
                     /coded_by="XM_016831952.2:235..1017"
                     /db_xref="GeneID:107905320"
ORIGIN      
        1 malanvfhaf ctrptpilpt vaapfpyplp tsfgmptkcl plvlqakrkt nvmfsqcfaa
       61 knelsevdng gddvkveeme essetllysf tplpllvlaa lpgagtvrsl fgpfvelvks
      121 wnlpdwlvhw ghpgnmavvl famggygtyl gfrirysddv eekakakdlh pkllggmfff
      181 falgatggvt slltsdkpif esphavtgfi gltlltiqti lptlfegkpg lrnvhgilgs
      241 gimalfliha alglqlglsy
//
LOCUS       XP_016687436             262 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor RAX2 [Gossypium hirsutum].
ACCESSION   XP_016687436
VERSION     XP_016687436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831947.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..262
                     /product="transcription factor RAX2"
                     /calculated_mol_wt=28984
     Region          1..>117
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..262
                     /gene="LOC107905317"
                     /coded_by="XM_016831947.2:109..897"
                     /db_xref="GeneID:107905317"
ORIGIN      
        1 mgrapccdis nvkkgpwspe edamlkdfih khgtggnwis lpqkaglrrc gkscrlrwln
       61 ylrpnikhgk fsddedriic nlfasigsrw siiaanlpgr tdndiknywn tklkkklfgm
      121 vphsyssssf snittagsvl qsqqhrgfsa nrlgrnkdse fgygggsggn hgdqqignle
      181 sffynegdkn dhhnlmyssr diangfsssv gsisssfdsn flygettsld ygierinqqi
      241 sstssscegf gfyqhnandy pc
//
LOCUS       XP_016687433            1328 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter B family member 1 [Gossypium hirsutum].
ACCESSION   XP_016687433
VERSION     XP_016687433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831944.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1328
                     /product="ABC transporter B family member 1"
                     /calculated_mol_wt=145470
     Region          81..649
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     Region          718..1301
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..1328
                     /gene="LOC107905315"
                     /coded_by="XM_016831944.2:397..4383"
                     /db_xref="GeneID:107905315"
ORIGIN      
        1 mskdseeikr ieqwkwsemq glelvsdpsl npkiqteeas ssscsklesd nnggneeklq
       61 qevpsigfne lfrfadgldy vlmgigslga lvhgcslpif lrffadlvns fgsnannmdk
      121 mmqevlkyaf yflvvgaaiw asswaeiscw mwtgerqttk mrikyleaal nqdiqyfdte
      181 vrtsdvvfai ntdavmvqda iseklgnfih ymatfvsgfv vgftavwqla lvtlgvvpli
      241 avigaihtit laklsaktqe alsqggnive qtivqirvvs afvgeskalq ayssalkvaq
      301 kigyktgfgk gmglgatyfv vfcsyalllw yggylvrhhy tngglaiatm favmigglgl
      361 gqsapsmsaf akakvaaaki friidhkpgi drdsesglel esvtglvelr nvdfaypsrp
      421 dvkilnnvsl cvpsgktial vgssgsgkst vvslierfyd ptsgevmldg hdiktlklrw
      481 lrsqiglvsq epalfattik enillgrpda ndieieeaar vanahsfivk lpdgfdtqvg
      541 erglqlsggq kqriaiaram lknpaillld eatsaldses eklvqealdr fmigrttlvi
      601 ahrlstirka dlvavlqegs vseigthdel makgengaya klirmqeaah etalnnarks
      661 sarpssarns vsspiiarns sygrspysrr lsdfstsdfs lslegyhpny rmekldfkeq
      721 agsfwrlvkm nspewiyalf gsigsivcgs lsaffayvls avlsvyynpd haymireigk
      781 ycylliglss aallfntlqh sfwdivgenl tkrvrekmlt avlknemawf dqeenesari
      841 aarlaldann vrsaigdris vivqntalml vactagfvlq wrlalvliav fpvvvaatvl
      901 qkmfmkgfsg dleaahakat qlageaianv rtvaafnsen kivrlfssnl qtplkhcfwk
      961 gqiagsgfgv aqfalyasya lglwyaswlv khgisdfskt irvfmvlmvs angaaetltl
     1021 apdfikggra mqsvfelldr kteiepddpd atqvpdrlrg evelkhvdfs ypsrpdipif
     1081 rdlnlrarag ktlalvgpsg cgkssviali qrfyepssgr vmidgkdirk ynlkslrkhi
     1141 sivpqepclf attiyenigy ghesateaei ieaatlanah kfissmpdgy ktfvgergvq
     1201 lsggqkqria iaralvrkae lmlldeatsa ldaesersvq ealhracsgk ttivvahrls
     1261 tirnahviav iddgkvaeqg shshllknyp dgcyarmiql qrftnsqvfe mtsgsssskq
     1321 kevnereg
//
LOCUS       XP_016687435             119 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein 593 [Gossypium hirsutum].
ACCESSION   XP_016687435
VERSION     XP_016687435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831946.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..119
                     /product="zinc finger protein 593"
                     /calculated_mol_wt=13553
     Region          7..107
                     /region_name="UFD2"
                     /note="U1-like Zn-finger-containing protein [General
                     function prediction only]; COG5112"
                     /db_xref="CDD:227443"
     Region          61..83
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..119
                     /gene="LOC107905316"
                     /coded_by="XM_016831946.2:165..524"
                     /db_xref="GeneID:107905316"
ORIGIN      
        1 mggkcpsrkv kkrrfshkta rrdkfllkgd dlvydelqks dtekkplprd edlpgmgqyy
       61 clhcdryfan stvrdehfkt krhkkrlkqm sgpaphtqld aelaagmgmp dnglalmsm
//
LOCUS       XP_016687430             353 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor-like protein DPB isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016687430
VERSION     XP_016687430.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831941.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687430.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="transcription factor-like protein DPB isoform
                     X1"
                     /calculated_mol_wt=38861
     Region          101..183
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Site            order(188,192,195..196,198..199,202..203,205..206,
                     209..210,213,216..217,220,223..224,226..227,229..231,234,
                     242..253,255,266..274,276,279,281,287..288,290)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271217"
     Region          188..234
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271217"
     Region          190..>294
                     /region_name="DP"
                     /note="Transcription factor DP; pfam08781"
                     /db_xref="CDD:462601"
     Site            order(212,215..216,219,249,258,260,275..276,278..283,290)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271217"
     CDS             1..353
                     /gene="LOC107905313"
                     /coded_by="XM_016831941.2:376..1437"
                     /db_xref="GeneID:107905313"
ORIGIN      
        1 mvtgsnsvqn hnhqedgdqn qtkrgasrsw gttvsgqsvs tsgsvgspss rcelamatpa
       61 sentflrlnh ldihgddags qgavgskkkk rgqravggdk sgrglrqfsm kvcekveskg
      121 rttynevade lvaeftdpgn niaspdqqqy deknirrrvy dalnvlmamd iiskdkkeiq
      181 wkglprtsls diedlkterl glrnriekka aylheleeqf vglqnliqrn eqlyssgnpp
      241 nggvalpfil vqtrphatve veisedmqlv hfdfnstpfe lhddnyvlka mkfcerpgsd
      301 emahnfsadg egssmsamyq qqivpppmtn tpgrpptspp lpgilkarvk peh
//
LOCUS       XP_016687431             352 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor-like protein DPB isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016687431
VERSION     XP_016687431.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831942.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687431.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="transcription factor-like protein DPB isoform
                     X2"
                     /calculated_mol_wt=38732
     Region          101..182
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Site            order(187,191,194..195,197..198,201..202,204..205,
                     208..209,212,215..216,219,222..223,225..226,228..230,233,
                     241..252,254,265..273,275,278,280,286..287,289)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271217"
     Region          187..233
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271217"
     Region          189..>293
                     /region_name="DP"
                     /note="Transcription factor DP; pfam08781"
                     /db_xref="CDD:462601"
     Site            order(211,214..215,218,248,257,259,274..275,277..282,289)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271217"
     CDS             1..352
                     /gene="LOC107905313"
                     /coded_by="XM_016831942.2:323..1381"
                     /db_xref="GeneID:107905313"
ORIGIN      
        1 mvtgsnsvqn hnhqedgdqn qtkrgasrsw gttvsgqsvs tsgsvgspss rcelamatpa
       61 sentflrlnh ldihgddags qgavgskkkk rgqravggdk sgrglrqfsm kvcekveskg
      121 rttynevade lvaeftdpgn niaspdqqyd eknirrrvyd alnvlmamdi iskdkkeiqw
      181 kglprtslsd iedlkterlg lrnriekkaa ylheleeqfv glqnliqrne qlyssgnppn
      241 ggvalpfilv qtrphatvev eisedmqlvh fdfnstpfel hddnyvlkam kfcerpgsde
      301 mahnfsadge gssmsamyqq qivpppmtnt pgrpptsppl pgilkarvkp eh
//
LOCUS       XP_016687432             352 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor-like protein DPB isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016687432
VERSION     XP_016687432.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687432.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..352
                     /product="transcription factor-like protein DPB isoform
                     X3"
                     /calculated_mol_wt=38773
     Region          100..182
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Site            order(187,191,194..195,197..198,201..202,204..205,
                     208..209,212,215..216,219,222..223,225..226,228..230,233,
                     241..252,254,265..273,275,278,280,286..287,289)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271217"
     Region          187..233
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271217"
     Region          189..>293
                     /region_name="DP"
                     /note="Transcription factor DP; pfam08781"
                     /db_xref="CDD:462601"
     Site            order(211,214..215,218,248,257,259,274..275,277..282,289)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271217"
     CDS             1..352
                     /gene="LOC107905313"
                     /coded_by="XM_016831943.2:376..1434"
                     /db_xref="GeneID:107905313"
ORIGIN      
        1 mvtgsnsvqn hnhqedgdqn qtkrgasrsw gttvsgqsvs tsgsvgspss rcelamatpa
       61 sentflrlnh ldihgddags qgavgkkkkr gqravggdks grglrqfsmk vcekveskgr
      121 ttynevadel vaeftdpgnn iaspdqqqyd eknirrrvyd alnvlmamdi iskdkkeiqw
      181 kglprtslsd iedlkterlg lrnriekkaa ylheleeqfv glqnliqrne qlyssgnppn
      241 ggvalpfilv qtrphatvev eisedmqlvh fdfnstpfel hddnyvlkam kfcerpgsde
      301 mahnfsadge gssmsamyqq qivpppmtnt pgrpptsppl pgilkarvkp eh
//
LOCUS       XP_040943596             351 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor-like protein DPB isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943596
VERSION     XP_040943596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087662.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..351
                     /product="transcription factor-like protein DPB isoform
                     X4"
                     /calculated_mol_wt=38645
     Region          100..181
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Site            order(186,190,193..194,196..197,200..201,203..204,
                     207..208,211,214..215,218,221..222,224..225,227..229,232,
                     240..251,253,264..272,274,277,279,285..286,288)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271217"
     Region          186..232
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271217"
     Region          188..>292
                     /region_name="DP"
                     /note="Transcription factor DP; pfam08781"
                     /db_xref="CDD:462601"
     Site            order(210,213..214,217,247,256,258,273..274,276..281,288)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271217"
     CDS             1..351
                     /gene="LOC107905313"
                     /coded_by="XM_041087662.1:326..1381"
                     /db_xref="GeneID:107905313"
ORIGIN      
        1 mvtgsnsvqn hnhqedgdqn qtkrgasrsw gttvsgqsvs tsgsvgspss rcelamatpa
       61 sentflrlnh ldihgddags qgavgkkkkr gqravggdks grglrqfsmk vcekveskgr
      121 ttynevadel vaeftdpgnn iaspdqqyde knirrrvyda lnvlmamdii skdkkeiqwk
      181 glprtslsdi edlkterlgl rnriekkaay lheleeqfvg lqnliqrneq lyssgnppng
      241 gvalpfilvq trphatveve isedmqlvhf dfnstpfelh ddnyvlkamk fcerpgsdem
      301 ahnfsadgeg ssmsamyqqq ivpppmtntp grpptspplp gilkarvkpe h
//
LOCUS       XP_016687429             311 aa            linear   PLN 06-AUG-2024
DEFINITION  flavonol sulfotransferase-like [Gossypium hirsutum].
ACCESSION   XP_016687429
VERSION     XP_016687429.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831940.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="flavonol sulfotransferase-like"
                     /calculated_mol_wt=35494
     Region          4..309
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..311
                     /gene="LOC107905312"
                     /coded_by="XM_016831940.2:188..1123"
                     /db_xref="GeneID:107905312"
ORIGIN      
        1 masfkeiist lprrkswygd dtflyqgfwc dtffieglmr aqqnfrsqps divicsamkt
       61 gttwlksltf aivtrstfdd stnplfnnls hdcvpllevd laqsstnrdp knpllathap
      121 ycslprsiid ssckivyicr dpkdslvsly hffarylask dmkppaleea felfcqgvss
      181 ygpywdhvlg fwkasldrpd kilflkyeem iedtvlyvkk iadfigypfs feelekgsve
      241 kivnmcsfen lsnlevnksg khregtpvvi enkmyfrkgk vgdwenyltp emavrldsit
      301 lqklngsglt l
//
LOCUS       XP_016684689             315 aa            linear   PLN 06-AUG-2024
DEFINITION  flavonol sulfotransferase-like [Gossypium hirsutum].
ACCESSION   XP_016684689
VERSION     XP_016684689.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684689.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="flavonol sulfotransferase-like"
                     /calculated_mol_wt=35806
     Region          6..313
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..315
                     /gene="LOC107903158"
                     /coded_by="XM_016829200.2:23..970"
                     /db_xref="GeneID:107903158"
ORIGIN      
        1 mkmasfkeii stlprrkswn dsnndfflyr gfwcysffie gvmsaqqnfq sqpsdivics
       61 apktgttwlk sltfaivtri tfddstnpll anlshdcvpl levdlaqssi nrdpknplla
      121 thvpysslpr siidssckiv yicrdpkdsf vsfyhfiarr laskdikpla leeafelycq
      181 gvsnygpywd hvlgfwkasl drpdkilflk yeemiedtvl yvkkladfig ypfsseeikk
      241 gsvdkiismc sfenlsnlev nksgkhregt pgvienkiyf rkgkvgdwen yltpemasrl
      301 dsltlqklng sgltl
//
LOCUS       XP_040943597             313 aa            linear   PLN 06-AUG-2024
DEFINITION  flavonol sulfotransferase-like [Gossypium hirsutum].
ACCESSION   XP_040943597
VERSION     XP_040943597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087663.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..313
                     /product="flavonol sulfotransferase-like"
                     /calculated_mol_wt=35334
     Region          4..311
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..313
                     /gene="LOC121214040"
                     /coded_by="XM_041087663.1:30..971"
                     /db_xref="GeneID:121214040"
ORIGIN      
        1 masfkeiist lprrkgwtds nndlflyrgf wcysffiegv msaqqnfqsq psdivicsap
       61 ktgttwlksl tfaivtrttf ddstspllan lshdcvpfle vdlaqsstnr dpknpllath
      121 vpysslpisi idssckivyi crnpkdsfvs fyhfiarlsa skdmkpvale eafelycqgv
      181 snygpywdhv lgfwkasldr pdkifflkye emiedtvlyi kkladfigyp fsseeikkgs
      241 vdkivsmcsf enlsnlevnk sgkhregtpg vienkiyfrk gkvgdwenyl tpemaaqlds
      301 itlqklngsg ltl
//
LOCUS       XP_016687428             313 aa            linear   PLN 06-AUG-2024
DEFINITION  flavonol sulfotransferase-like [Gossypium hirsutum].
ACCESSION   XP_016687428
VERSION     XP_016687428.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831939.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687428.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..313
                     /product="flavonol sulfotransferase-like"
                     /calculated_mol_wt=35328
     Region          4..311
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..313
                     /gene="LOC107905311"
                     /coded_by="XM_016831939.2:31..972"
                     /db_xref="GeneID:107905311"
ORIGIN      
        1 masfkeiist lprrkgwtds nndlflyqgf wcysffiegv msaqqnfqsq psdivicsap
       61 ktgttwlksl tfaivtrttf ddstspllan lshdcvpfle vdlaqsstnr dpknpllath
      121 vpysslprsi idssckivyi crnpkdsfvs fyhfiarlsa skdmkpvale eafelycqgv
      181 snygpywdhv lgfwkasldr pdkilflkye emiedtilyv kkladfigyp fsseeikkgs
      241 idkivsmcsf enlsnlevnk sgkhregtpg vienkiyfrk gkvgdwenyl tpemaaqlds
      301 itlqklngsg ltl
//
LOCUS       XP_040943598             121 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943598
VERSION     XP_040943598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087664.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..121
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13361
     CDS             1..121
                     /gene="LOC107905310"
                     /coded_by="XM_041087664.1:616..981"
                     /db_xref="GeneID:107905310"
ORIGIN      
        1 mgfkkvykcl mdifpqkcnk havqvyfltp tahvdsrilk avaivnskdv daaaeivlfe
       61 ilpylskriv agsssswnrs ppmqaneglt giilwkeriv lairslqnml vhvllspgqr
      121 g
//
LOCUS       XP_016687427            2826 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687427
VERSION     XP_016687427.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831938.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687427.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2826
                     /product="uncharacterized protein"
                     /calculated_mol_wt=322852
     Region          65..194
                     /region_name="DUF6469"
                     /note="Domain of unknown function (DUF6469); pfam20073"
                     /db_xref="CDD:437905"
     Region          <227..823
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
     Region          619..816
                     /region_name="AAA_12"
                     /note="AAA domain; pfam13087"
                     /db_xref="CDD:463780"
     Region          <1329..1643
                     /region_name="HelD"
                     /note="DNA helicase IV [Replication, recombination and
                     repair]; COG3973"
                     /db_xref="CDD:443173"
     CDS             1..2826
                     /gene="LOC107905309"
                     /coded_by="XM_016831938.2:173..8653"
                     /db_xref="GeneID:107905309"
ORIGIN      
        1 mgfidivfqw sledifndnl ykdqveiipv sfqsveqyfg syllplldet raalrssmev
       61 iarapyaevt ylnesksrgt llldvnvdyw rnrfsdrekk pyktlpgdvf vianvkpeta
      121 sdlqrvgrtw ifalvtniqe dddkdnssst sfkvkvledf vskdeaqksl fvvhltnltt
      181 ntriwsalhm ernlkiikev lhadsmvaes cslcssdigg nwneiflknl lsklnesqkk
      241 slvaclnkml cnhkshveli wgppgtgktk tvsvllfall rmkyrtlaca ptniaitevv
      301 arvlklvkea kkacsvaddq fcslgdillf gskerlkvds eieevfldyr vkrltecfgp
      361 lgwwhcftsm itfledcvpq yhiflenest kkqehasede nqekgccset ddkkgihksf
      421 leyarerfat talplrrcvs ilhthipkiy fqahnfkdle tlsgllnsld tclffdglas
      481 eeveelllrs kddkflpqnl cdpsrllcsi rsqclsvlrr lrdslgqlkl psarnkdslv
      541 qfcfqtaslf fstacnsykl yklemkplnv lvideaaqlk ecesaipmql pgivhsilig
      601 dewqlpatvq snvsneagfg rslfqrlttl ghskhllniq yrmhpsisff pnacfynkri
      661 ldaagvkhks yekhylpwpm fgpysfinis greekddags shrnmveval vqrlvqtlfk
      721 awnssrerls vgiispyaaq vvaiqeklgr kyektdgfav kvksvdgfqg geediiiist
      781 vrsnssgalg fvsnaqrtnv altrarhclw ilgdgrtlak hesvwqglvh dakmrhcffn
      841 adeekglaka ifdarkefdq lddllnpdsv lfknarwkvl fsdnfrksfg kvksaqtqks
      901 vlnlllklsc gwrpkkrnvd licesssmvl kqfkfeglyi vcsidvvkeq rytqvlkawd
      961 llpledimrl vkrldgifkm ytddfirhcn ekylegdlev pktwttsfgi vkfktlsqde
     1021 iknssrgssa sddrcylens kvseslllmk fyslssgvvs hllfdhdgre pelpfevtdh
     1081 erdiilfpks tfilgrsgtg kttvltmklf kqeqlhllat egldavntnr vsdvclanrn
     1141 mggvggteat plrqlfvtvs pklcyavknh vlqlkrfvsg gnfslegafq dvddtdgaaq
     1201 fkdipdsfvd ilpkayplvi tlqkflimld gtmgnsffek fydarelsnm evvtaptlvr
     1261 ncirskeity ekfcsiywph fnanltnkld ssrvfteims hikgglrsgn sydgrlnaed
     1321 yvklsegras alssherqmi ydifqdyekm kgengefdma dvvvdlhdrl qneryegdim
     1381 dfvyidevqd ltmrqialfk hvcknvsegf vfcgdtaqti argidfrfed irslfynefv
     1441 leskcetnhg kkekgqiskn fhlsqnfrth dgvlrlaqsi idllyhffps fvdilcpets
     1501 lifgeapiwl esdnednvva kiftnsgnag ahmvgfgaeq vilvrddpak neilkyvgkq
     1561 alvltiveck glefqdvlly nffgssplkn qwrvvyefmk eqglldascp spsfkqakhn
     1621 imcselkqly vaitrtrqrl wicenvkefs epvfnywkrk clvqvrkldd slaqamqvas
     1681 sseewksrgy kllhqdnyem aticferand tygeklakal glranadrlh gsnpemasia
     1741 rrqaadifds igkaeraaec fymlkeyera ghiylekcge saleraaecf vlagcyitaa
     1801 evyakgnyis kclsvctkgk lfdmglqyiq ywkqhakade emvqrskdle elkqtflenc
     1861 arhyheindk raminyvraf dsmnsrrhfl qslecldell sleeesgnfl eaaniaklrg
     1921 dlllaadllg kgaqyeeavh lilwfvfans lwlagstgwp lkqfkekenl lskaksfakn
     1981 lsrwfyglvc seadillnkp snlflmkqyl sasqmhkstr gemlvariil dhhlhlnisn
     2041 yewidelvfd lasyseeqiy nnrvssetlv yfwnfwkdki lkifeyleha enqygtndsr
     2101 rygdfclnyf gvwrqfnnln piyllnsdae wlrklenkhv crnqkqvsis ihqfvsaars
     2161 ywcselfsvg lqvlkmlell ynfshrnsls sfnqsrslth iyevasflln skflnsqhae
     2221 kdlmkfvnls tkhffgyifp ldwreslren mislreteis rklleevile stgskcnsls
     2281 ygkigkvali ilgsgeltte ffvkifeclh wnrpwknfiv nlkedrgspt fsttdnisef
     2341 igenrssgtt tesaachikq tgsiepvilk fhealqdtyk vnwrkisdym spvcflylve
     2401 rhlmllsfvn gyffstkttf vewvvyldgr psltssfvav dkhsledivk fvidmvrqfl
     2461 fckretidwi kksgiavkey hsllvlrlvl itcfvhlnfg kgldllfdll rqknitellp
     2521 weiydalrrr qrnnrlntdv nlladafkki gnplvivsmh gncpkfgckd aifvdmkfnp
     2581 ckeellrilf pktgcsqyqt agfsceellp anynegtsse vvpfsssvsl sdqdlntqnq
     2641 nvgdlqfnhd cfweiiealt avdgikdlrt fisyastlkv flgklvsiid agtkeyllkk
     2701 paggedddfs rdamsvlnlm nqlhseless klklecsvpi igalceelrs gwsimmpllq
     2761 qqgylvkddn haseesgdhc dveesvskae ecskgkkpas attfnskpqg nsksnknkks
     2821 rgrnrk
//
LOCUS       XP_016687424             810 aa            linear   PLN 06-AUG-2024
DEFINITION  TSL-kinase interacting protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687424
VERSION     XP_016687424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..810
                     /product="TSL-kinase interacting protein 1 isoform X1"
                     /calculated_mol_wt=90247
     Region          52..94
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     CDS             1..810
                     /gene="LOC107905306"
                     /coded_by="XM_016831935.2:466..2898"
                     /db_xref="GeneID:107905306"
ORIGIN      
        1 mrtesqvfia seaqnnqeni piqvgdpnvv pstsnnsvle qpakkptrqw aawtrqeees
       61 fftalrqvgk nfekitcrvq sknkdqvrhy yyrlvrrmnk llgpglclda knskdtnaam
      121 lrwwslleky sckasklhlk prrfkifiea lehqllkdrk knvrkrpshg enisptspnt
      181 stnqsrasgh dahtvklvlv esqniqklgp gkgsfkrnsn vgvnrsnnkg esntmkvasn
      241 tmkparqrwk svassaaykk wekaaiagvs lvanaaehle rttsdkeveh eqdtpdpehk
      301 ilepvdnnql plpafsqnpf aesnvhatvk lklqlfpidd strralemdk hnpyleltls
      361 irkkissvle hlnrkwgnss vasgvlmlfp ygvqrenlra yqrwtqaaiv saadvyamig
      421 rpqvfrlryg wvsdaevesl trqapvspsy lsnvhnmnae srkscvmeea qvsassnndv
      481 skklddpckn qpilqkenna lepprtgfpt mtekklatgl kdnfgdspip arnassdrse
      541 tcnlaimrwl edaddqrlkn snaalsvgew adsltnisvg dllaevphdl dgncvdravt
      601 ensqclqqip fscdsfdaai aahismhqnk mdipsipsha ssiwdaedtc daflfrknpi
      661 pctdvprfsg itsqaackqi arqnlaelst hskespdpee pmensacedl tdkcpsdphi
      721 tdttendfng ltdiywpesl gpldldiptc kyhteelifs dslgglsrli assldafqnc
      781 sffgtdkkep tstvgaqdtf ssafkissdn
//
LOCUS       XP_016687425             810 aa            linear   PLN 06-AUG-2024
DEFINITION  TSL-kinase interacting protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687425
VERSION     XP_016687425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..810
                     /product="TSL-kinase interacting protein 1 isoform X1"
                     /calculated_mol_wt=90247
     Region          52..94
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     CDS             1..810
                     /gene="LOC107905306"
                     /coded_by="XM_016831936.2:783..3215"
                     /db_xref="GeneID:107905306"
ORIGIN      
        1 mrtesqvfia seaqnnqeni piqvgdpnvv pstsnnsvle qpakkptrqw aawtrqeees
       61 fftalrqvgk nfekitcrvq sknkdqvrhy yyrlvrrmnk llgpglclda knskdtnaam
      121 lrwwslleky sckasklhlk prrfkifiea lehqllkdrk knvrkrpshg enisptspnt
      181 stnqsrasgh dahtvklvlv esqniqklgp gkgsfkrnsn vgvnrsnnkg esntmkvasn
      241 tmkparqrwk svassaaykk wekaaiagvs lvanaaehle rttsdkeveh eqdtpdpehk
      301 ilepvdnnql plpafsqnpf aesnvhatvk lklqlfpidd strralemdk hnpyleltls
      361 irkkissvle hlnrkwgnss vasgvlmlfp ygvqrenlra yqrwtqaaiv saadvyamig
      421 rpqvfrlryg wvsdaevesl trqapvspsy lsnvhnmnae srkscvmeea qvsassnndv
      481 skklddpckn qpilqkenna lepprtgfpt mtekklatgl kdnfgdspip arnassdrse
      541 tcnlaimrwl edaddqrlkn snaalsvgew adsltnisvg dllaevphdl dgncvdravt
      601 ensqclqqip fscdsfdaai aahismhqnk mdipsipsha ssiwdaedtc daflfrknpi
      661 pctdvprfsg itsqaackqi arqnlaelst hskespdpee pmensacedl tdkcpsdphi
      721 tdttendfng ltdiywpesl gpldldiptc kyhteelifs dslgglsrli assldafqnc
      781 sffgtdkkep tstvgaqdtf ssafkissdn
//
LOCUS       XP_016687426             779 aa            linear   PLN 06-AUG-2024
DEFINITION  TSL-kinase interacting protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687426
VERSION     XP_016687426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831937.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..779
                     /product="TSL-kinase interacting protein 1 isoform X2"
                     /calculated_mol_wt=87046
     Region          52..94
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     CDS             1..779
                     /gene="LOC107905306"
                     /coded_by="XM_016831937.2:276..2615"
                     /db_xref="GeneID:107905306"
ORIGIN      
        1 mrtesqvfia seaqnnqeni piqvgdpnvv pstsnnsvle qpakkptrqw aawtrqeees
       61 fftalrqvgk nfekitcrvq sknkdqvrhy yyrlvrrmnk llgpglclda knskdtnaam
      121 lrwwslleky sckasklhlk prrfkifiea lehqllkdrk knvrkrpshe sqniqklgpg
      181 kgsfkrnsnv gvnrsnnkge sntmkvasnt mkparqrwks vassaaykkw ekaaiagvsl
      241 vanaaehler ttsdkevehe qdtpdpehki lepvdnnqlp lpafsqnpfa esnvhatvkl
      301 klqlfpidds trralemdkh npyleltlsi rkkissvleh lnrkwgnssv asgvlmlfpy
      361 gvqrenlray qrwtqaaivs aadvyamigr pqvfrlrygw vsdaeveslt rqapvspsyl
      421 snvhnmnaes rkscvmeeaq vsassnndvs kklddpcknq pilqkennal epprtgfptm
      481 tekklatglk dnfgdspipa rnassdrset cnlaimrwle daddqrlkns naalsvgewa
      541 dsltnisvgd llaevphdld gncvdravte nsqclqqipf scdsfdaaia ahismhqnkm
      601 dipsipshas siwdaedtcd aflfrknpip ctdvprfsgi tsqaackqia rqnlaelsth
      661 skespdpeep mensacedlt dkcpsdphit dttendfngl tdiywpeslg pldldiptck
      721 yhteelifsd slgglsrlia ssldafqncs ffgtdkkept stvgaqdtfs safkissdn
//
LOCUS       XP_040943599             779 aa            linear   PLN 06-AUG-2024
DEFINITION  TSL-kinase interacting protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943599
VERSION     XP_040943599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087665.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..779
                     /product="TSL-kinase interacting protein 1 isoform X2"
                     /calculated_mol_wt=87046
     Region          52..94
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     CDS             1..779
                     /gene="LOC107905306"
                     /coded_by="XM_041087665.1:783..3122"
                     /db_xref="GeneID:107905306"
ORIGIN      
        1 mrtesqvfia seaqnnqeni piqvgdpnvv pstsnnsvle qpakkptrqw aawtrqeees
       61 fftalrqvgk nfekitcrvq sknkdqvrhy yyrlvrrmnk llgpglclda knskdtnaam
      121 lrwwslleky sckasklhlk prrfkifiea lehqllkdrk knvrkrpshe sqniqklgpg
      181 kgsfkrnsnv gvnrsnnkge sntmkvasnt mkparqrwks vassaaykkw ekaaiagvsl
      241 vanaaehler ttsdkevehe qdtpdpehki lepvdnnqlp lpafsqnpfa esnvhatvkl
      301 klqlfpidds trralemdkh npyleltlsi rkkissvleh lnrkwgnssv asgvlmlfpy
      361 gvqrenlray qrwtqaaivs aadvyamigr pqvfrlrygw vsdaeveslt rqapvspsyl
      421 snvhnmnaes rkscvmeeaq vsassnndvs kklddpcknq pilqkennal epprtgfptm
      481 tekklatglk dnfgdspipa rnassdrset cnlaimrwle daddqrlkns naalsvgewa
      541 dsltnisvgd llaevphdld gncvdravte nsqclqqipf scdsfdaaia ahismhqnkm
      601 dipsipshas siwdaedtcd aflfrknpip ctdvprfsgi tsqaackqia rqnlaelsth
      661 skespdpeep mensacedlt dkcpsdphit dttendfngl tdiywpeslg pldldiptck
      721 yhteelifsd slgglsrlia ssldafqncs ffgtdkkept stvgaqdtfs safkissdn
//
LOCUS       XP_040943600             201 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943600
VERSION     XP_040943600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087666.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23181
     Region          <114..162
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..201
                     /gene="LOC107905307"
                     /coded_by="XM_041087666.1:482..1087"
                     /db_xref="GeneID:107905307"
ORIGIN      
        1 mwrghvgsrs nspvcycfff ffglfdcflh pqlsilysln hfmssfsqss vssknsrgtk
       61 rkwvleedva lvacmvdlhn vgtfnadtrf kagylnelek mlekvlpnam lkakrnlesr
      121 irtlkrdlsi vydmlsgksn sgfgwdkhwq lvvaedalwn syinshkeag qfkhrsfsyy
      181 gttychickr sshrercsss r
//
LOCUS       XP_016687421             478 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687421
VERSION     XP_016687421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=53529
     Region          345..395
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(345..347,365,367..368,381,383..385,387..389,
                     391..392)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..478
                     /gene="LOC107905305"
                     /coded_by="XM_016831932.2:258..1694"
                     /db_xref="GeneID:107905305"
ORIGIN      
        1 mrterkphli kkpadakrqs vdeslgpglk deatevehll vepkservsv drvfcfgken
       61 iekhlkmedf scafdygwki gsggldsihg qggddlklev ldglldevdd iqaahdlssa
      121 cedflldief pekfseldcg phvgsnlrns sseshspggs snsvggmses sivtvqesns
      181 kngvlgkmvn cdihhtirse cgcqapvmet irpskehaqd fvesddekpl vsfivsnkkv
      241 kssikvtkgg tllrqkrlrk ptkryieefs rnsttsgknk clkvrsqeef sqvpsesqsr
      301 rgrpkkimpk mefesdcels asesedeckr tkrfktacdr rkhqrmwtla eviklvdgia
      361 qygvgrwtdi kkllfassay rtpvdlrdkw rnllrsssah khnrkelqge tnvkhyvrpl
      421 pktvvcrire latihpypka rspnlssins dpsskqpttt kaapinthgr nlrgkkcn
//
LOCUS       XP_016687422             478 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687422
VERSION     XP_016687422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831933.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..478
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=53529
     Region          345..395
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(345..347,365,367..368,381,383..385,387..389,
                     391..392)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..478
                     /gene="LOC107905305"
                     /coded_by="XM_016831933.2:233..1669"
                     /db_xref="GeneID:107905305"
ORIGIN      
        1 mrterkphli kkpadakrqs vdeslgpglk deatevehll vepkservsv drvfcfgken
       61 iekhlkmedf scafdygwki gsggldsihg qggddlklev ldglldevdd iqaahdlssa
      121 cedflldief pekfseldcg phvgsnlrns sseshspggs snsvggmses sivtvqesns
      181 kngvlgkmvn cdihhtirse cgcqapvmet irpskehaqd fvesddekpl vsfivsnkkv
      241 kssikvtkgg tllrqkrlrk ptkryieefs rnsttsgknk clkvrsqeef sqvpsesqsr
      301 rgrpkkimpk mefesdcels asesedeckr tkrfktacdr rkhqrmwtla eviklvdgia
      361 qygvgrwtdi kkllfassay rtpvdlrdkw rnllrsssah khnrkelqge tnvkhyvrpl
      421 pktvvcrire latihpypka rspnlssins dpsskqpttt kaapinthgr nlrgkkcn
//
LOCUS       XP_040943601             476 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943601
VERSION     XP_040943601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087667.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=53288
     Region          345..395
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(345..347,365,367..368,381,383..385,387..389,
                     391..392)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..476
                     /gene="LOC107905305"
                     /coded_by="XM_041087667.1:233..1663"
                     /db_xref="GeneID:107905305"
ORIGIN      
        1 mrterkphli kkpadakrqs vdeslgpglk deatevehll vepkservsv drvfcfgken
       61 iekhlkmedf scafdygwki gsggldsihg qggddlklev ldglldevdd iqaahdlssa
      121 cedflldief pekfseldcg phvgsnlrns sseshspggs snsvggmses sivtvqesns
      181 kngvlgkmvn cdihhtirse cgcqapvmet irpskehaqd fvesddekpl vsfivsnkkv
      241 kssikvtkgg tllrqkrlrk ptkryieefs rnsttsgknk clkvrsqeef sqvpsesqsr
      301 rgrpkkimpk mefesdcels asesedeckr tkrfktacdr rkhqrmwtla eviklvdgia
      361 qygvgrwtdi kkllfassay rtpvdlrdkw rnllrsssah khnrkegetn vkhyvrplpk
      421 tvvcrirela tihpypkars pnlssinsdp sskqptttka apinthgrnl rgkkcn
//
LOCUS       XP_016687423             476 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687423
VERSION     XP_016687423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=53288
     Region          345..395
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(345..347,365,367..368,381,383..385,387..389,
                     391..392)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..476
                     /gene="LOC107905305"
                     /coded_by="XM_016831934.2:263..1693"
                     /db_xref="GeneID:107905305"
ORIGIN      
        1 mrterkphli kkpadakrqs vdeslgpglk deatevehll vepkservsv drvfcfgken
       61 iekhlkmedf scafdygwki gsggldsihg qggddlklev ldglldevdd iqaahdlssa
      121 cedflldief pekfseldcg phvgsnlrns sseshspggs snsvggmses sivtvqesns
      181 kngvlgkmvn cdihhtirse cgcqapvmet irpskehaqd fvesddekpl vsfivsnkkv
      241 kssikvtkgg tllrqkrlrk ptkryieefs rnsttsgknk clkvrsqeef sqvpsesqsr
      301 rgrpkkimpk mefesdcels asesedeckr tkrfktacdr rkhqrmwtla eviklvdgia
      361 qygvgrwtdi kkllfassay rtpvdlrdkw rnllrsssah khnrkegetn vkhyvrplpk
      421 tvvcrirela tihpypkars pnlssinsdp sskqptttka apinthgrnl rgkkcn
//
LOCUS       XP_016687420             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687420
VERSION     XP_016687420.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831931.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687420.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..105
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11957
     CDS             1..105
                     /gene="LOC107905304"
                     /coded_by="XM_016831931.2:92..409"
                     /db_xref="GeneID:107905304"
ORIGIN      
        1 mwsvkllvlf lvammvsssc mttrptravi ggtygwreqq ryhavrkene verrknmved
       61 ssdknidnhh niprqrfgmm tlgkpkgspf llpfdlsptl sasfe
//
LOCUS       XP_040943602             634 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040943602
VERSION     XP_040943602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087668.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..634
                     /product="pentatricopeptide repeat-containing protein
                     At2g35030, mitochondrial"
                     /calculated_mol_wt=71641
     Region          45..634
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          55..78
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          84..111
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          116..143
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          147..174
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          176..205
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          207..236
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          238..267
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          269..298
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          300..327
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..398
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          406..433
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          439..469
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          475..501
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..634
                     /gene="LOC121214042"
                     /coded_by="XM_041087668.1:56..1960"
                     /db_xref="GeneID:121214042"
ORIGIN      
        1 mliisralit frcfnkftvl rslnlprpvi svkckttits idysvsssva rsnwlitnls
       61 kegklsqare lfdnlcerdk dvitwtalis gyiriglide arklfdrvds rknvvtwtam
      121 lngyirsdri vdaerlfaem pvknvvswnt mvdgymqngm vdkafevfde mpernvvswn
      181 tmltalvqcg rvedaralfd kmpkkdvisw tamvtglakn grvdearkvf drmpernvvs
      241 wnamitgyaq nmkldeafdl fermptrdls swngmitgli qngelrraek lfnempcknv
      301 vswttmitgy vqseqseeal kifakmlaed rvkpnegtfv svlsacsnla glvegqqvhq
      361 tivktvyrrs eivvsalinm yskcgelnia rrmfddglis hrdvvswngm iaayahhgcg
      421 edaislfkkm sdlhfkpnda tyvallsacs hsgmleeglr yfdelvrdks iqvrddhyac
      481 lvdlysragk lkeafefivq lgikpsvsvw eallagchvh gdvilgklva kkildtepen
      541 agtymllsni yaskgkwrna akvrlkmkdk glkkqpgcsw ievenkvhvf vvgakshshs
      601 nliypilhel hakmrkagni sntnyleeee dlic
//
LOCUS       XP_016687417             218 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687417
VERSION     XP_016687417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..218
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG3 isoform X1"
                     /calculated_mol_wt=23923
     Region          14..196
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..218
                     /gene="LOC107905301"
                     /coded_by="XM_016831928.2:176..832"
                     /db_xref="GeneID:107905301"
ORIGIN      
        1 memesetkqs kfkricvfcg ssqgkkrsyq daaielgrel vsrnidlvyg ggsiglmglv
       61 sqavhnggrh vigvipktlm preltgetig evkavadmhq rkaemakhsd afialpggyg
      121 tleellevit waqlgihdks vgllnvdgyy nsllsfmdka veegfispsa rqiivsapta
      181 kelvkkleey vpchervask lswemeqlgy sktydisr
//
LOCUS       XP_040943603             184 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943603
VERSION     XP_040943603.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087669.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG3 isoform X2"
                     /calculated_mol_wt=20033
     Region          9..162
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..184
                     /gene="LOC107905301"
                     /coded_by="XM_041087669.1:26..580"
                     /db_xref="GeneID:107905301"
ORIGIN      
        1 msfnvnvsrn idlvygggsi glmglvsqav hnggrhvigv ipktlmprel tgetigevka
       61 vadmhqrkae makhsdafia lpggygtlee llevitwaql gihdksvgll nvdgyynsll
      121 sfmdkaveeg fispsarqii vsaptakelv kkleeyvpch ervasklswe meqlgyskty
      181 disr
//
LOCUS       XP_040943604             179 aa            linear   PLN 06-AUG-2024
DEFINITION  cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943604
VERSION     XP_040943604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087670.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="cytokinin riboside 5'-monophosphate
                     phosphoribohydrolase LOG3 isoform X3"
                     /calculated_mol_wt=19471
     Region          1..157
                     /region_name="PpnN"
                     /note="Nucleotide monophosphate nucleosidase PpnN/YdgH,
                     Lonely Guy (LOG) family [Nucleotide transport and
                     metabolism]; COG1611"
                     /db_xref="CDD:441219"
     CDS             1..179
                     /gene="LOC107905301"
                     /coded_by="XM_041087670.1:216..755"
                     /db_xref="GeneID:107905301"
ORIGIN      
        1 mvsrnidlvy gggsiglmgl vsqavhnggr hvigvipktl mpreltgeti gevkavadmh
       61 qrkaemakhs dafialpggy gtleellevi twaqlgihdk svgllnvdgy ynsllsfmdk
      121 aveegfisps arqiivsapt akelvkklee yvpchervas klswemeqlg ysktydisr
//
LOCUS       XP_016687414             450 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687414
VERSION     XP_016687414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..450
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50687
     Region          <137..180
                     /region_name="Methyltransf_11"
                     /note="Methyltransferase domain; pfam08241"
                     /db_xref="CDD:462406"
     CDS             1..450
                     /gene="LOC107905295"
                     /coded_by="XM_016831925.2:458..1810"
                     /db_xref="GeneID:107905295"
ORIGIN      
        1 mdfktlklmi fhgslarrvl lralmvital sivpllqiis gvdlesgyss sfifpgtfff
       61 skawgsfkmv qyggnrnltt svvkelmgkn mlnysakalc vgegsmsavm alknlgffdv
      121 hgvyrhpfss lkhkkfiyel dyedksydfv lsrdldkvsv pallvleier vlkpggigai
      181 ligptgsdpt slirsatpvs sllkasivvy vdhlneltlv vfekklenvt yfeqyrlpad
      241 cpsmtnnkai mnhieplmev kpmefeenia ylpefvnvss kqrlvyidig asehmnsnvs
      301 swffpsypld hkafdvyfvd hnisvmlsyi krhginfvyy pglaenrats sstnrdsdpf
      361 ledegfdfql wfkdtvqyad yvvlkmnagd velqllsdlf esgiicfide lflhcsdrte
      421 sgqalkggdc mslfkslrra gvyvhqwwga
//
LOCUS       XP_016687415             285 aa            linear   PLN 06-AUG-2024
DEFINITION  aquaporin PIP2-2 [Gossypium hirsutum].
ACCESSION   XP_016687415
VERSION     XP_016687415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="aquaporin PIP2-2"
                     /calculated_mol_wt=30320
     Region          29..264
                     /region_name="MIP"
                     /note="Major intrinsic protein; pfam00230"
                     /db_xref="CDD:395174"
     Site            order(85,103..105,222..223,226,229)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(105..107,226..228)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..285
                     /gene="LOC107905296"
                     /coded_by="XM_016831926.2:92..949"
                     /db_xref="GeneID:107905296"
ORIGIN      
        1 mandvevgse fqakdyhdpp paplvdaqel tqwsfyraii aefiatllfl yitvltvigy
       61 ksqvdpdkgg qdcdgvgilg iawafggmif ilvyctagis gghinpavtf glflarkvsl
      121 vrailymaaq clgaicgcgl vkafqksyyn kygggansla dgystgtgla aeiigtfvlv
      181 ytvfsatdpk rnardshvpv laplpigfav fmvhlatipi tgtginpars fgavvmfnqd
      241 kpwddhwifw vgpfigaaia aiyhqyilra gaakalgsfr sssam
//
LOCUS       XP_016687411             514 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687411
VERSION     XP_016687411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=56377
     Region          264..313
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     CDS             1..514
                     /gene="LOC107905294"
                     /coded_by="XM_016831922.2:255..1799"
                     /db_xref="GeneID:107905294"
ORIGIN      
        1 menegdhvlk ngegtsscns nntlnpplqr fadsteiiee tphdqhrrqd dlvleipnrs
       61 vedvreefvr idmtltptat prrvnfspmp spifnrfdes piysspkskp slkgllpkls
      121 fkyrntnlei ekaailalgg ssadiqgkpr iprtfslski ftprakstss lpgtpiahsn
      181 pesthggqkg gitgppihrs hsvptlnkdg sitqldsfgg vfrvipttpr vvkgtvvtts
      241 niviksdmdg ngddgedipe eeavcricli elgegaetlk mecsckgela lahqecaikw
      301 fsikgnkmcd vckqevqnlp vtllriqnaq ahnmrgpgvr iesaryrvwq dvpilvivsm
      361 layfcfleql lvskmksgai aislpfscil gllasmtstt mvrrkyvwly atiqfalvvl
      421 sahlfysllh vqavlsvlls afvgfgstmc gtsiiyevsg awerrhiesn qplssqevpr
      481 pnqtpvmapl qtqtdtnahg neperrales gnan
//
LOCUS       XP_016687412             514 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687412
VERSION     XP_016687412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..514
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=56377
     Region          264..313
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     CDS             1..514
                     /gene="LOC107905294"
                     /coded_by="XM_016831923.2:174..1718"
                     /db_xref="GeneID:107905294"
ORIGIN      
        1 menegdhvlk ngegtsscns nntlnpplqr fadsteiiee tphdqhrrqd dlvleipnrs
       61 vedvreefvr idmtltptat prrvnfspmp spifnrfdes piysspkskp slkgllpkls
      121 fkyrntnlei ekaailalgg ssadiqgkpr iprtfslski ftprakstss lpgtpiahsn
      181 pesthggqkg gitgppihrs hsvptlnkdg sitqldsfgg vfrvipttpr vvkgtvvtts
      241 niviksdmdg ngddgedipe eeavcricli elgegaetlk mecsckgela lahqecaikw
      301 fsikgnkmcd vckqevqnlp vtllriqnaq ahnmrgpgvr iesaryrvwq dvpilvivsm
      361 layfcfleql lvskmksgai aislpfscil gllasmtstt mvrrkyvwly atiqfalvvl
      421 sahlfysllh vqavlsvlls afvgfgstmc gtsiiyevsg awerrhiesn qplssqevpr
      481 pnqtpvmapl qtqtdtnahg neperrales gnan
//
LOCUS       XP_016687413             442 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687413
VERSION     XP_016687413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..442
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=48107
     Region          192..241
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     CDS             1..442
                     /gene="LOC107905294"
                     /coded_by="XM_016831924.2:328..1656"
                     /db_xref="GeneID:107905294"
ORIGIN      
        1 mtltptatpr rvnfspmpsp ifnrfdespi ysspkskpsl kgllpklsfk yrntnleiek
       61 aailalggss adiqgkprip rtfslskift prakstsslp gtpiahsnpe sthggqkggi
      121 tgppihrshs vptlnkdgsi tqldsfggvf rvipttprvv kgtvvttsni viksdmdgng
      181 ddgedipeee avcricliel gegaetlkme csckgelala hqecaikwfs ikgnkmcdvc
      241 kqevqnlpvt llriqnaqah nmrgpgvrie saryrvwqdv pilvivsmla yfcfleqllv
      301 skmksgaiai slpfscilgl lasmtsttmv rrkyvwlyat iqfalvvlsa hlfysllhvq
      361 avlsvllsaf vgfgstmcgt siiyevsgaw errhiesnqp lssqevprpn qtpvmaplqt
      421 qtdtnahgne perralesgn an
//
LOCUS       XP_016687410             490 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ protein P58IPK homolog [Gossypium hirsutum].
ACCESSION   XP_016687410
VERSION     XP_016687410.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831921.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687410.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="dnaJ protein P58IPK homolog"
                     /calculated_mol_wt=54403
     Region          30..>236
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          84..114
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          119..152
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          192..>423
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          201..228
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          279..313
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          318..346
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          367..>436
                     /region_name="PRK10767"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:236757"
     CDS             1..490
                     /gene="LOC107905293"
                     /coded_by="XM_016831921.2:139..1611"
                     /db_xref="GeneID:107905293"
ORIGIN      
        1 mlkslslnwa fnsmawkglv ytafilnfvl icqhlllqpl vsaldenlgn aaelfervsq
       61 sikvkrysea lndlnaaiea dpalseaymr rasllcqlcr yeeseksykk flelkprnsv
      121 aekelsqlhq aqsaletafg lfeskdytka ldyvdkvvlv fspacskakm lklklllaak
      181 dyssvisesg filkedennl ealllrghay yyladhdvaq rhyqkglrld pehgelkkay
      241 frlknllkkt ksaednankg klrvavedyk galaldpnhl ahnvhlhlgl ckvlvrlgrg
      301 kdalsscsea lnidkellea lvqrgeakll tedwegaved lksaaekspq dmnirealmr
      361 aekalkmskr kdwykilgvs ktasvaeikr aykklalqwh pdknvdnree aeaqfreiaa
      421 ayevlgdeek rtrydrgedi edigmggggf npfggggggq hftftfdggf pggfgggfpg
      481 gggggfgfnf
//
LOCUS       XP_016687408             266 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-71 [Gossypium hirsutum].
ACCESSION   XP_016687408
VERSION     XP_016687408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..266
                     /product="syntaxin-71"
                     /calculated_mol_wt=29894
     Region          176..232
                     /region_name="SNARE_Qc"
                     /note="SNARE motif, subgroup Qc; cd15841"
                     /db_xref="CDD:277194"
     Site            order(178..181,183..185,187..189,191..192,194..199,
                     201..202,204..205,208..209,211..213,215..217,219..220,
                     222..223,226..227,229..230,232)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277194"
     Site            205
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277194"
     CDS             1..266
                     /gene="LOC107905292"
                     /coded_by="XM_016831919.2:222..1022"
                     /db_xref="GeneID:107905292"
ORIGIN      
        1 mtvidiltrv dvickkydky dvekqrdqni sgddafarqy aaieadivsa lqkaelvske
       61 kskasavavn aeirrtkarl leevpklqrl avkkvkgist eemtarsdlv lalpdriqai
      121 pdgtaapktg gwmssapsas rteikfdsdg rfdneyfqes eqssqfrqey emrrmkqdqg
      181 ldmisegldt lknmahdmne eldrqvplmd eietkvdkaa gdlkntnvrl khtvtqlrss
      241 rnfcidivll civlgiaayl ynvlkk
//
LOCUS       XP_016687405             793 aa            linear   PLN 06-AUG-2024
DEFINITION  probable DNA helicase MCM8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687405
VERSION     XP_016687405.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687405.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..793
                     /product="probable DNA helicase MCM8 isoform X1"
                     /calculated_mol_wt=87772
     Region          69..779
                     /region_name="Mcm2"
                     /note="DNA replicative helicase MCM subunit Mcm2,
                     Cdc46/Mcm family [Replication, recombination and repair];
                     COG1241"
                     /db_xref="CDD:440854"
     CDS             1..793
                     /gene="LOC107905290"
                     /coded_by="XM_016831916.2:269..2650"
                     /db_xref="GeneID:107905290"
ORIGIN      
        1 mfgshgersi ekygsinasn vgsivpvyft eneyskdeek lifdlirffs aspgkdladq
       61 vkddcgavsl sldyqrfrrl cdieefyakm edkpkialsc msaaihqvll nnqdfyleeg
      121 kkinirlhny pesmtvlknl kaayidklvs vrgtvvkasn vkplvikmnf acekcateip
      181 rsfpdgkfsp psactihgck srtfkpirss aqaidfqkir lqellksedh eegrvprtve
      241 celtedlvdl cipgdvatvt giirvinnym digggkskgr nqgfyylyie avsiknsksl
      301 svtedmedsn sdarakelvd lfsfsprdle fivkfskehg sdvfrqilqs icpsiyghel
      361 vkagitlalf ggvrkhsmdr nkvpvrgdih vivvgdpglg ksqllqaaaa vsprgiyvcg
      421 nattnagltv avvkdtmtnd yafeagamvl adgglccide fdkmsaehqa lleameqqcv
      481 svakaglvas lsartsvlaa anpvgghynr aktvnenlkm spallsrfdl vfilldkpde
      541 qldkqlsehi mslhagyges spalkkpria kasqnveait mrvkggslvs rlrldpkkda
      601 dfvplpgall rkyisyarty vfprmskpaa eilqkfylql rdrntsgdgt pitarqlesl
      661 vrltqararv dlreeitvqd akdaveimke slydkyvdeh gfvdfgrsgg msqqkeakrf
      721 lsalnkqsel qqkdcfsise iysladrigl rvpdidtfvd nlnsvgyllk kgpktyqvls
      781 ssysrsqpsr src
//
LOCUS       XP_016687406             793 aa            linear   PLN 06-AUG-2024
DEFINITION  probable DNA helicase MCM8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687406
VERSION     XP_016687406.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831917.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687406.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..793
                     /product="probable DNA helicase MCM8 isoform X1"
                     /calculated_mol_wt=87772
     Region          69..779
                     /region_name="Mcm2"
                     /note="DNA replicative helicase MCM subunit Mcm2,
                     Cdc46/Mcm family [Replication, recombination and repair];
                     COG1241"
                     /db_xref="CDD:440854"
     CDS             1..793
                     /gene="LOC107905290"
                     /coded_by="XM_016831917.2:257..2638"
                     /db_xref="GeneID:107905290"
ORIGIN      
        1 mfgshgersi ekygsinasn vgsivpvyft eneyskdeek lifdlirffs aspgkdladq
       61 vkddcgavsl sldyqrfrrl cdieefyakm edkpkialsc msaaihqvll nnqdfyleeg
      121 kkinirlhny pesmtvlknl kaayidklvs vrgtvvkasn vkplvikmnf acekcateip
      181 rsfpdgkfsp psactihgck srtfkpirss aqaidfqkir lqellksedh eegrvprtve
      241 celtedlvdl cipgdvatvt giirvinnym digggkskgr nqgfyylyie avsiknsksl
      301 svtedmedsn sdarakelvd lfsfsprdle fivkfskehg sdvfrqilqs icpsiyghel
      361 vkagitlalf ggvrkhsmdr nkvpvrgdih vivvgdpglg ksqllqaaaa vsprgiyvcg
      421 nattnagltv avvkdtmtnd yafeagamvl adgglccide fdkmsaehqa lleameqqcv
      481 svakaglvas lsartsvlaa anpvgghynr aktvnenlkm spallsrfdl vfilldkpde
      541 qldkqlsehi mslhagyges spalkkpria kasqnveait mrvkggslvs rlrldpkkda
      601 dfvplpgall rkyisyarty vfprmskpaa eilqkfylql rdrntsgdgt pitarqlesl
      661 vrltqararv dlreeitvqd akdaveimke slydkyvdeh gfvdfgrsgg msqqkeakrf
      721 lsalnkqsel qqkdcfsise iysladrigl rvpdidtfvd nlnsvgyllk kgpktyqvls
      781 ssysrsqpsr src
//
LOCUS       XP_016687407             762 aa            linear   PLN 06-AUG-2024
DEFINITION  probable DNA helicase MCM8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687407
VERSION     XP_016687407.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687407.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..762
                     /product="probable DNA helicase MCM8 isoform X2"
                     /calculated_mol_wt=84579
     Region          69..748
                     /region_name="Mcm2"
                     /note="DNA replicative helicase MCM subunit Mcm2,
                     Cdc46/Mcm family [Replication, recombination and repair];
                     COG1241"
                     /db_xref="CDD:440854"
     CDS             1..762
                     /gene="LOC107905290"
                     /coded_by="XM_016831918.2:269..2557"
                     /db_xref="GeneID:107905290"
ORIGIN      
        1 mfgshgersi ekygsinasn vgsivpvyft eneyskdeek lifdlirffs aspgkdladq
       61 vkddcgavsl sldyqrfrrl cdieefyakm edkpkialsc msaaihqvll nnqdfyleeg
      121 kkinirlhny pesmtvlknl kaayidklvs vrgtvvkasn vkplvikmnf acekcateip
      181 rsfpdgkfsp psactihgck srtfkpirss aqaidfqkir lqellksedh eegrvprtve
      241 celtedlvdl cipgdvatvt giirvinnym digggkskgr nqgfyylyie avsiknsksl
      301 svtedmedsn sdarakelvd lfsfsprdle fivkfskehg sdvfrqilqs icpsiyghel
      361 vkagitlalf ggvrkhsmdr nkvpvrgdih vivvgdpglg ksqllqaaaa vsprgamvla
      421 dgglccidef dkmsaehqal leameqqcvs vakaglvasl sartsvlaaa npvgghynra
      481 ktvnenlkms pallsrfdlv filldkpdeq ldkqlsehim slhagygess palkkpriak
      541 asqnveaitm rvkggslvsr lrldpkkdad fvplpgallr kyisyartyv fprmskpaae
      601 ilqkfylqlr drntsgdgtp itarqleslv rltqararvd lreeitvqda kdaveimkes
      661 lydkyvdehg fvdfgrsggm sqqkeakrfl salnkqselq qkdcfsisei ysladriglr
      721 vpdidtfvdn lnsvgyllkk gpktyqvlss sysrsqpsrs rc
//
LOCUS       XP_016687404            1035 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g14770,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016687404
VERSION     XP_016687404.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687404.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1035
                     /product="pentatricopeptide repeat-containing protein
                     At5g14770, mitochondrial"
                     /calculated_mol_wt=115311
     Region          64..90
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          67..>563
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          99..125
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          131..160
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          167..194
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          202..229
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          235..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          272..319
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>802
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          327..356
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          362..391
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          397..424
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          434..461
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          467..496
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          502..531
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          537..564
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          609..636
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          644..670
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          676..705
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          711..739
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          746..775
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          783..810
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          816..845
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          817..861
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          849..898
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          851..880
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          886..915
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          921..968
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          921..950
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          956..994
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1035
                     /gene="LOC107905289"
                     /coded_by="XM_016831915.2:137..3244"
                     /db_xref="GeneID:107905289"
ORIGIN      
        1 mikyftfskk slflfhfhsr astlsstkhp splrlpktpp cfspkplsnp iipstkthly
       61 aslfctlihl ylscgrysha ketffkmrkh gvipvltlwn hliysfnasg lvsevmllys
      121 emlacgvlpn iftvnvlvhs vvkdgnlsfg lellrsfgak nivdtvtynt liwgfceqgl
      181 ayqglgvlse mvkkgitfda iscniivkgf crigfvryge wvmdnlttcg ickdvigfni
      241 lidgyckigd vnyavelihr mrsegivpdi isyntlingf ckkgdffmak slineilgsh
      301 rkkdfkilag tdnrkevdng vvlepdlith ttlisayckq ealeealsiy eemvvngilp
      361 dvvtyssiln gfckhgklae akvlmmemek mgvdpnhfsy atlmdsifkt gnsvdasalq
      421 slmivcgivf dvvvyttlmd glfkagkske aetifitllk nkmvpnttty salidgrckl
      481 gdingaesal eemkekdvvp nvvtyssivn cyirkkmlde avnvmrkmvs enilpneyiy
      541 aalidgyfka gkemvaldly semkliglke nnfildsfln nlkrsgrmwe aeelvkdmms
      601 rglsldhvny tslmdgyfke gkesaaltla qemteknipf dvvaynvlin gllrlgkyda
      661 qsvyarmrel dlspdiitcn tminayckkg kfehalhlwd dmkscglmpn sitcnilirg
      721 lckageihka lnvlnemlsl gfspttaihr flldassrng radaifqmhe hllsmgleln
      781 qavfntlitv lcrlgmtrka vsvledmtgr glsadrvtyn alihgyctgs hvdkafatys
      841 lmiakgvtpn ivtynlllkg lstsglmkea delfalmkek glnpnastyd tlisghgkig
      901 snresikvyc emitkgfipr tstynvlids fsrvgkmtqa qellkemqlr gslpnsstyd
      961 ilisgwcdhs nqseldrask msclvevknl llemngkqlv psestvfsis stfakigkkf
     1021 darqfskgly krniv
//
LOCUS       XP_040943606             700 aa            linear   PLN 06-AUG-2024
DEFINITION  L-type lectin-domain containing receptor kinase VIII.1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943606
VERSION     XP_040943606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087672.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..700
                     /product="L-type lectin-domain containing receptor kinase
                     VIII.1 isoform X1"
                     /calculated_mol_wt=75355
     Region          47..253
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            order(145,147,161)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     Region          381..645
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(381..385,389,402,404,432,448..451,455,457,498,500,
                     502..503,505,516,519,536..539)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(381..385,389,402,404,432,448..451,455,498,500,
                     502..503,505,516)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(385,455,457,498,500,502,519,536..539)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(515..522,533..535,536..539)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..700
                     /gene="LOC121214045"
                     /coded_by="XM_041087672.1:189..2291"
                     /db_xref="GeneID:121214045"
ORIGIN      
        1 mlpvsynfas iifsvrflcf vlsfnsifst tefdfgtlsl tslkllgdah lsngsvrltr
       61 dvevpdsgag rvlyskpvrf rqpgthklcs fstffsfsis nlnpssiggg lafvispdsd
      121 fvgagggslg llddkgqalg fvavefdtlm dveykdingn hvgldlnsvv ssqaadlggl
      181 didlksgnvi nswieydssf gvlnisisys nlkpknpils vslsldqyvn dfmyvgfsgs
      241 tqgstevhsi ewwsfssrsg sgsgptsppp stattltnpt adsfkspppl ppsssspspp
      301 ssschnqlcr egpgavagvv tagafflalf agaliwvysk kfkhenklgq sfaseiiksp
      361 keftykelka atrcfdanri ighgafgtvy kgilpengdi vavkrcshns qgkneflael
      421 liigtlrhrn lvrlqgwche kgeillvydl mpkgsldkal feaktplpwp erqkillgva
      481 salaylhqec drqvihrdvk tsnimldeay naklgdfgla rqvehdkspd atvaagtmgy
      541 lapeylltgr atdktdvfsy gavvlevasg rrpietgkap arvsgnlvew vwglhkegkl
      601 ltaadakleg rfeesamrrv llvglacshp dplarptmrs vvqmlvgeae vpmvprtkps
      661 tsfstshlll tlqdsvsdyn givtisssss ensyigldlv
//
LOCUS       XP_040943607             623 aa            linear   PLN 06-AUG-2024
DEFINITION  L-type lectin-domain containing receptor kinase VIII.1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943607
VERSION     XP_040943607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087673.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..623
                     /product="L-type lectin-domain containing receptor kinase
                     VIII.1 isoform X2"
                     /calculated_mol_wt=67051
     Region          47..>159
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Region          304..568
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(304..308,312,325,327,355,371..374,378,380,421,423,
                     425..426,428,439,442,459..462)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(304..308,312,325,327,355,371..374,378,421,423,
                     425..426,428,439)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(308,378,380,421,423,425,442,459..462)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(438..445,456..458,459..462)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..623
                     /gene="LOC121214045"
                     /coded_by="XM_041087673.1:167..2038"
                     /db_xref="GeneID:121214045"
ORIGIN      
        1 mlpvsynfas iifsvrflcf vlsfnsifst tefdfgtlsl tslkllgdah lsngsvrltr
       61 dvevpdsgag rvlyskpvrf rqpgthklcs fstffsfsis nlnpssiggg lafvispdsd
      121 fvgagggslg llddkgqalg fvavefdtlm dveykdingf sgstqgstev hsiewwsfss
      181 rsgsgsgpts pppstattlt nptadsfksp pplppssssp sppssschnq lcregpgava
      241 gvvtagaffl alfagaliwv yskkfkhenk lgqsfaseii kspkeftyke lkaatrcfda
      301 nriighgafg tvykgilpen gdivavkrcs hnsqgknefl aelliigtlr hrnlvrlqgw
      361 chekgeillv ydlmpkgsld kalfeaktpl pwperqkill gvasalaylh qecdrqvihr
      421 dvktsnimld eaynaklgdf glarqvehdk spdatvaagt mgylapeyll tgratdktdv
      481 fsygavvlev asgrrpietg kaparvsgnl vewvwglhke gklltaadak legrfeesam
      541 rrvllvglac shpdplarpt mrsvvqmlvg eaevpmvprt kpstsfstsh llltlqdsvs
      601 dyngivtiss sssensyigl dlv
//
LOCUS       XP_016687402              82 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-binding protein S1FA [Gossypium hirsutum].
ACCESSION   XP_016687402
VERSION     XP_016687402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831913.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..82
                     /product="DNA-binding protein S1FA"
                     /calculated_mol_wt=9088
     Region          17..82
                     /region_name="S1FA"
                     /note="DNA binding protein S1FA; pfam04689"
                     /db_xref="CDD:282535"
     CDS             1..82
                     /gene="LOC107905287"
                     /coded_by="XM_016831913.2:252..500"
                     /db_xref="GeneID:107905287"
ORIGIN      
        1 msneyefadk gdkiiyetea kgfnpglivl lviggllitf lvgnyilysy aqktlpprkk
       61 kpvskkkmkr erlkqgvsap ge
//
LOCUS       XP_016687401             248 aa            linear   PLN 06-AUG-2024
DEFINITION  cell number regulator 8 [Gossypium hirsutum].
ACCESSION   XP_016687401
VERSION     XP_016687401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..248
                     /product="cell number regulator 8"
                     /calculated_mol_wt=26942
     Region          80..218
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..248
                     /gene="LOC107905286"
                     /coded_by="XM_016831912.2:149..895"
                     /db_xref="GeneID:107905286"
ORIGIN      
        1 mansndnnnd ehhessplls kqvadqdlke kpsgkkakea aaevpahpvv atgdgfgwta
       61 dglplvhrsv vgeplgrsqw nssllaclgr ndefcssdie vcllgslvpc vlygtnverl
      121 gsdpgtfanh clpysvlyli gnsffgwncl apwfsyptrt airrkfnleg scealhrscg
      181 ccgscvedel qreqceltcd lathvlchpc avcqegreir rrlhhpgfna qpvftmvppg
      241 eqtmarga
//
LOCUS       XP_040943608              82 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943608
VERSION     XP_040943608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087674.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..82
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9163
     CDS             1..82
                     /gene="LOC121214046"
                     /coded_by="XM_041087674.1:194..442"
                     /db_xref="GeneID:121214046"
ORIGIN      
        1 meftiiksrp msilllllll lsihyfstgs fdvsekevye idyrgpetht sipppghghr
       61 ssvhqqtdlp thelrsgnki hg
//
LOCUS       XP_016687398             516 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation factor 1-alpha isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687398
VERSION     XP_016687398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831909.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..516
                     /product="elongation factor 1-alpha isoform X1"
                     /calculated_mol_wt=57138
     Region          70..515
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            83..90
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(84,86,90..91,94,97..98,145..146,164..165,188..189,
                     238,242)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(86,88..91,222..223,225,263..265)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(90,133,136..137,139,141,143..145,147,158,160,
                     162..164,166,169)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            135..145
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            141
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            160..163
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            162..180
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            222..225
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            263..265
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..516
                     /gene="LOC107905285"
                     /coded_by="XM_016831909.2:55..1605"
                     /db_xref="GeneID:107905285"
ORIGIN      
        1 mssmsrwiif nptgkketlv kpklnhwllk lkeaasltcf llsfqllrge pflcsdsqlv
       61 fslslqsfim gkekvhinlv vighvdsgks tttghliykl ggidkrvier fekeaaemnk
      121 rsfkyawvld klkaerergi tidialwkfe ttkyyctvid apghrdfikn mitgtsqadc
      181 avliidsttg gfeagiskdg qtrehallaf tlgvrqmicc cnkmdattpk yskarfdeiv
      241 kevssylkkv gynpekipfv pisgfegdnm ierstnldwy kgptlleald qitepkrpsd
      301 kplrlplqdv ykiggigtvp vgrvetgvlk pgmvvtfgpt glttevksve mhheslpeaf
      361 pgdnvgfnvk nvavkdlkrg fvasnskddp akeaanftsq viimnhpgqi gngyapvldc
      421 htshiavkfs elltkidrrs gkelekepkf lkngdagmvk miptkpmvve tfseypplgr
      481 favrdmrqtv avgviksvek kdptgakvtk saakkk
//
LOCUS       XP_016687400             447 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation factor 1-alpha isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687400
VERSION     XP_016687400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..447
                     /product="elongation factor 1-alpha isoform X2"
                     /calculated_mol_wt=49236
     Region          1..446
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..447
                     /gene="LOC107905285"
                     /coded_by="XM_016831911.2:193..1536"
                     /db_xref="GeneID:107905285"
ORIGIN      
        1 mgkekvhinl vvighvdsgk stttghliyk lggidkrvie rfekeaaemn krsfkyawvl
       61 dklkaererg itidialwkf ettkyyctvi dapghrdfik nmitgtsqad cavliidstt
      121 ggfeagiskd gqtrehalla ftlgvrqmic ccnkmdattp kyskarfdei vkevssylkk
      181 vgynpekipf vpisgfegdn mierstnldw ykgptlleal dqitepkrps dkplrlplqd
      241 vykiggigtv pvgrvetgvl kpgmvvtfgp tglttevksv emhheslpea fpgdnvgfnv
      301 knvavkdlkr gfvasnskdd pakeaanfts qviimnhpgq igngyapvld chtshiavkf
      361 selltkidrr sgkelekepk flkngdagmv kmiptkpmvv etfseypplg rfavrdmrqt
      421 vavgviksve kkdptgakvt ksaakkk
//
LOCUS       XP_016687397             466 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 1 [Gossypium hirsutum].
ACCESSION   XP_016687397
VERSION     XP_016687397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..466
                     /product="protein IQ-DOMAIN 1"
                     /calculated_mol_wt=51602
     CDS             1..466
                     /gene="LOC107905284"
                     /coded_by="XM_016831908.2:273..1673"
                     /db_xref="GeneID:107905284"
ORIGIN      
        1 mgkkvkwlss lkkafnpesk ekknqildkq vhlgpsssna aaptletvnl spppqpedek
       61 iikpetvaea tdddvvvapa vptpaavtvv qrrlntdsrf agksmeevaa ikiqtafrvy
      121 makralralr glvrlkslme gpavkrqats tlrcmqtlsr vqcqirmrri rmteenqalq
      181 rqilqkhake lvnlqmgedw ddslqskeqi easllskhka amrreramay sfthqqtwkn
      241 gsksmnplfm dmnnptwgws wlerwmaarp weghgvtgke pnndqssvkn ahfegeiska
      301 yaryqlnldn kqspkssqkp nrtsshlsps pkppstpsrk lksaspsgsi iapdddtrsi
      361 vsvqsernrr hsiagssvrd deslasspsl psymvptksa raktrlqspl gleangtpdk
      421 gpimstkkrl syppspakpr rhsgpprvdt siitntevga vndgvi
//
LOCUS       XP_016687396             123 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import inner membrane translocase subunit TIM14-3
            [Gossypium hirsutum].
ACCESSION   XP_016687396
VERSION     XP_016687396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM14-3"
                     /calculated_mol_wt=13374
     Region          <54..113
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cl02542"
                     /db_xref="CDD:413365"
     CDS             1..123
                     /gene="LOC107905283"
                     /coded_by="XM_016831907.2:155..526"
                     /db_xref="GeneID:107905283"
ORIGIN      
        1 mqqqsrdste mvapliagia vaaaayagry sirawqafka rpptarvrrf yeggfqpsmt
       61 rreaalilgv restpaekik eahrrvmvan hpdaggshyl askineakdm mlrrnkggsg
      121 saf
//
LOCUS       XP_016687387             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687387
VERSION     XP_016687387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=41335
     Region          222..297
                     /region_name="RNase_P-MRP_p29"
                     /note="Ribonuclease P/MRP, subunit p29; pfam01868"
                     /db_xref="CDD:460367"
     CDS             1..369
                     /gene="LOC107905282"
                     /coded_by="XM_016831898.2:711..1820"
                     /db_xref="GeneID:107905282"
ORIGIN      
        1 matttlfsqn qrkrgleeal errfavakae llqeqkknkk tlvedgkeis stkapiapss
       61 nlslkkgnfp fsgpsssqdv eensevyskl sepmhekllp sdskfsnkkg nmadkilhel
      121 lqggdsaqky mqgsrsikfe nwilldnfvk grlmstgsqi ralknhskrs krhmsmkqlk
      181 tsglfelpqa mqkfdtfkpm hemwkgymnq llktsgknql aqcligadlh galilvaeck
      241 vtsftgvsgi miretaetfg limqdnkfrv vpkklsifif qvdcwkitlq gdkltsrnsg
      301 issatswnpt sseknqptwt lksfpqlrpl kewwsscqhs eqkvggilss lftytkafgp
      361 slisskasy
//
LOCUS       XP_016687388             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687388
VERSION     XP_016687388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=41335
     Region          222..297
                     /region_name="RNase_P-MRP_p29"
                     /note="Ribonuclease P/MRP, subunit p29; pfam01868"
                     /db_xref="CDD:460367"
     CDS             1..369
                     /gene="LOC107905282"
                     /coded_by="XM_016831899.2:778..1887"
                     /db_xref="GeneID:107905282"
ORIGIN      
        1 matttlfsqn qrkrgleeal errfavakae llqeqkknkk tlvedgkeis stkapiapss
       61 nlslkkgnfp fsgpsssqdv eensevyskl sepmhekllp sdskfsnkkg nmadkilhel
      121 lqggdsaqky mqgsrsikfe nwilldnfvk grlmstgsqi ralknhskrs krhmsmkqlk
      181 tsglfelpqa mqkfdtfkpm hemwkgymnq llktsgknql aqcligadlh galilvaeck
      241 vtsftgvsgi miretaetfg limqdnkfrv vpkklsifif qvdcwkitlq gdkltsrnsg
      301 issatswnpt sseknqptwt lksfpqlrpl kewwsscqhs eqkvggilss lftytkafgp
      361 slisskasy
//
LOCUS       XP_016687390             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687390
VERSION     XP_016687390.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831901.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=41335
     Region          222..297
                     /region_name="RNase_P-MRP_p29"
                     /note="Ribonuclease P/MRP, subunit p29; pfam01868"
                     /db_xref="CDD:460367"
     CDS             1..369
                     /gene="LOC107905282"
                     /coded_by="XM_016831901.2:773..1882"
                     /db_xref="GeneID:107905282"
ORIGIN      
        1 matttlfsqn qrkrgleeal errfavakae llqeqkknkk tlvedgkeis stkapiapss
       61 nlslkkgnfp fsgpsssqdv eensevyskl sepmhekllp sdskfsnkkg nmadkilhel
      121 lqggdsaqky mqgsrsikfe nwilldnfvk grlmstgsqi ralknhskrs krhmsmkqlk
      181 tsglfelpqa mqkfdtfkpm hemwkgymnq llktsgknql aqcligadlh galilvaeck
      241 vtsftgvsgi miretaetfg limqdnkfrv vpkklsifif qvdcwkitlq gdkltsrnsg
      301 issatswnpt sseknqptwt lksfpqlrpl kewwsscqhs eqkvggilss lftytkafgp
      361 slisskasy
//
LOCUS       XP_016687391             336 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687391
VERSION     XP_016687391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831902.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..336
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=38162
     Region          222..300
                     /region_name="RNase_P-MRP_p29"
                     /note="Ribonuclease P/MRP, subunit p29; pfam01868"
                     /db_xref="CDD:460367"
     CDS             1..336
                     /gene="LOC107905282"
                     /coded_by="XM_016831902.2:709..1719"
                     /db_xref="GeneID:107905282"
ORIGIN      
        1 matttlfsqn qrkrgleeal errfavakae llqeqkknkk tlvedgkeis stkapiapss
       61 nlslkkgnfp fsgpsssqdv eensevyskl sepmhekllp sdskfsnkkg nmadkilhel
      121 lqggdsaqky mqgsrsikfe nwilldnfvk grlmstgsqi ralknhskrs krhmsmkqlk
      181 tsglfelpqa mqkfdtfkpm hemwkgymnq llktsgknql aqcligadlh galilvaeck
      241 vtsftgvsgi miretaetfg limqdnkfrv vpkklsifif qvdcwkitlq gdkltsrnse
      301 ytrrreisry ssftirkfre cccvfahflq elesnc
//
LOCUS       XP_040943609             301 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943609
VERSION     XP_040943609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087675.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..301
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=33741
     Region          222..297
                     /region_name="RNase_P-MRP_p29"
                     /note="Ribonuclease P/MRP, subunit p29; pfam01868"
                     /db_xref="CDD:460367"
     CDS             1..301
                     /gene="LOC107905282"
                     /coded_by="XM_041087675.1:370..1275"
                     /db_xref="GeneID:107905282"
ORIGIN      
        1 matttlfsqn qrkrgleeal errfavakae llqeqkknkk tlvedgkeis stkapiapss
       61 nlslkkgnfp fsgpsssqdv eensevyskl sepmhekllp sdskfsnkkg nmadkilhel
      121 lqggdsaqky mqgsrsikfe nwilldnfvk grlmstgsqi ralknhskrs krhmsmkqlk
      181 tsglfelpqa mqkfdtfkpm hemwkgymnq llktsgknql aqcligadlh galilvaeck
      241 vtsftgvsgi miretaetfg limqdnkfrv vpkklsifif qvdcwkitlq gdkltsrnsg
      301 l
//
LOCUS       XP_040943610             581 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 2, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943610
VERSION     XP_040943610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087676.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..581
                     /product="interactor of constitutive active ROPs 2,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=65538
     Region          73..>300
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <224..511
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..581
                     /gene="LOC121202836"
                     /coded_by="XM_041087676.1:233..1978"
                     /db_xref="GeneID:121202836"
ORIGIN      
        1 mqtpkasrts svvvprkksp mtpqtarqlk ipgansgsvs spntaskask drspkvterk
       61 alkspvsekn glsqvtelea qldqlqgdlk ktkdqltase swkrlalqea eaakkevlim
      121 sskleeserq lmeisasedd rveelrkisk drdrawqsel eavqkhhsmd saalvsamne
      181 iqklkvqlek vyesesiqtk haesahaeir nmkieltetl slveklksel tdcrksearg
      241 lelvsetrmq levanktiek lrsdatkete vynmlllele qskgrvksle glvsklqvel
      301 vgngcikdpe qqneeneeik rvktelnfak leisqlrsal deaevryqee yikstlqirs
      361 ayeqveciks essqkeakle aeltrtkanv eelrsqnegl reselaaelk klefdlkelk
      421 dnltvketel ntiteqnkil kreiesktks depvvvllea skaaeraalm kvgylteetd
      481 ksnrraarlt eelesaqaan temeaelkrl kvqanqwrka aeaatamlsn ngkysdktip
      541 fdiaigspkw eniddddddd plkkknnmlr kigvlwkkgq k
//
LOCUS       XP_040943611             581 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 2, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943611
VERSION     XP_040943611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087677.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..581
                     /product="interactor of constitutive active ROPs 2,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=65538
     Region          73..>300
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <224..511
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..581
                     /gene="LOC121202836"
                     /coded_by="XM_041087677.1:149..1894"
                     /db_xref="GeneID:121202836"
ORIGIN      
        1 mqtpkasrts svvvprkksp mtpqtarqlk ipgansgsvs spntaskask drspkvterk
       61 alkspvsekn glsqvtelea qldqlqgdlk ktkdqltase swkrlalqea eaakkevlim
      121 sskleeserq lmeisasedd rveelrkisk drdrawqsel eavqkhhsmd saalvsamne
      181 iqklkvqlek vyesesiqtk haesahaeir nmkieltetl slveklksel tdcrksearg
      241 lelvsetrmq levanktiek lrsdatkete vynmlllele qskgrvksle glvsklqvel
      301 vgngcikdpe qqneeneeik rvktelnfak leisqlrsal deaevryqee yikstlqirs
      361 ayeqveciks essqkeakle aeltrtkanv eelrsqnegl reselaaelk klefdlkelk
      421 dnltvketel ntiteqnkil kreiesktks depvvvllea skaaeraalm kvgylteetd
      481 ksnrraarlt eelesaqaan temeaelkrl kvqanqwrka aeaatamlsn ngkysdktip
      541 fdiaigspkw eniddddddd plkkknnmlr kigvlwkkgq k
//
LOCUS       XP_040943612             580 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 2, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943612
VERSION     XP_040943612.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087678.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..580
                     /product="interactor of constitutive active ROPs 2,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=65410
     Region          72..>299
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <223..510
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..580
                     /gene="LOC121202836"
                     /coded_by="XM_041087678.1:225..1967"
                     /db_xref="GeneID:121202836"
ORIGIN      
        1 mqtpkasrts svvvprkksp mtpqtarqlk ipgansgsvs spntaskask drspkvterk
       61 alkspvseng lsqvteleaq ldqlqgdlkk tkdqltases wkrlalqeae aakkevlims
      121 skleeserql meisaseddr veelrkiskd rdrawqsele avqkhhsmds aalvsamnei
      181 qklkvqlekv yesesiqtkh aesahaeirn mkieltetls lveklkselt dcrkseargl
      241 elvsetrmql evanktiekl rsdatketev ynmllleleq skgrvksleg lvsklqvelv
      301 gngcikdpeq qneeneeikr vktelnfakl eisqlrsald eaevryqeey ikstlqirsa
      361 yeqvecikse ssqkeaklea eltrtkanve elrsqneglr eselaaelkk lefdlkelkd
      421 nltvketeln titeqnkilk reiesktksd epvvvlleas kaaeraalmk vgylteetdk
      481 snrraarlte elesaqaant emeaelkrlk vqanqwrkaa eaatamlsnn gkysdktipf
      541 diaigspkwe nidddddddp lkkknnmlrk igvlwkkgqk
//
LOCUS       XP_040943613             580 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 2, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943613
VERSION     XP_040943613.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087679.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..580
                     /product="interactor of constitutive active ROPs 2,
                     chloroplastic isoform X3"
                     /calculated_mol_wt=65451
     Region          72..>299
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <223..510
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..580
                     /gene="LOC121202836"
                     /coded_by="XM_041087679.1:225..1967"
                     /db_xref="GeneID:121202836"
ORIGIN      
        1 mqtpkartss vvvprkkspm tpqtarqlki pgansgsvss pntaskaskd rspkvterka
       61 lkspvsekng lsqvteleaq ldqlqgdlkk tkdqltases wkrlalqeae aakkevlims
      121 skleeserql meisaseddr veelrkiskd rdrawqsele avqkhhsmds aalvsamnei
      181 qklkvqlekv yesesiqtkh aesahaeirn mkieltetls lveklkselt dcrkseargl
      241 elvsetrmql evanktiekl rsdatketev ynmllleleq skgrvksleg lvsklqvelv
      301 gngcikdpeq qneeneeikr vktelnfakl eisqlrsald eaevryqeey ikstlqirsa
      361 yeqvecikse ssqkeaklea eltrtkanve elrsqneglr eselaaelkk lefdlkelkd
      421 nltvketeln titeqnkilk reiesktksd epvvvlleas kaaeraalmk vgylteetdk
      481 snrraarlte elesaqaant emeaelkrlk vqanqwrkaa eaatamlsnn gkysdktipf
      541 diaigspkwe nidddddddp lkkknnmlrk igvlwkkgqk
//
LOCUS       XP_040943614             580 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 2, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943614
VERSION     XP_040943614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087680.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..580
                     /product="interactor of constitutive active ROPs 2,
                     chloroplastic isoform X3"
                     /calculated_mol_wt=65451
     Region          72..>299
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <223..510
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..580
                     /gene="LOC121202836"
                     /coded_by="XM_041087680.1:154..1896"
                     /db_xref="GeneID:121202836"
ORIGIN      
        1 mqtpkartss vvvprkkspm tpqtarqlki pgansgsvss pntaskaskd rspkvterka
       61 lkspvsekng lsqvteleaq ldqlqgdlkk tkdqltases wkrlalqeae aakkevlims
      121 skleeserql meisaseddr veelrkiskd rdrawqsele avqkhhsmds aalvsamnei
      181 qklkvqlekv yesesiqtkh aesahaeirn mkieltetls lveklkselt dcrkseargl
      241 elvsetrmql evanktiekl rsdatketev ynmllleleq skgrvksleg lvsklqvelv
      301 gngcikdpeq qneeneeikr vktelnfakl eisqlrsald eaevryqeey ikstlqirsa
      361 yeqvecikse ssqkeaklea eltrtkanve elrsqneglr eselaaelkk lefdlkelkd
      421 nltvketeln titeqnkilk reiesktksd epvvvlleas kaaeraalmk vgylteetdk
      481 snrraarlte elesaqaant emeaelkrlk vqanqwrkaa eaatamlsnn gkysdktipf
      541 diaigspkwe nidddddddp lkkknnmlrk igvlwkkgqk
//
LOCUS       XP_040943615             579 aa            linear   PLN 06-AUG-2024
DEFINITION  interactor of constitutive active ROPs 2, chloroplastic isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040943615
VERSION     XP_040943615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087681.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..579
                     /product="interactor of constitutive active ROPs 2,
                     chloroplastic isoform X4"
                     /calculated_mol_wt=65323
     Region          71..>298
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <222..509
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..579
                     /gene="LOC121202836"
                     /coded_by="XM_041087681.1:225..1964"
                     /db_xref="GeneID:121202836"
ORIGIN      
        1 mqtpkartss vvvprkkspm tpqtarqlki pgansgsvss pntaskaskd rspkvterka
       61 lkspvsengl sqvteleaql dqlqgdlkkt kdqltasesw krlalqeaea akkevlimss
      121 kleeserqlm eisaseddrv eelrkiskdr drawqselea vqkhhsmdsa alvsamneiq
      181 klkvqlekvy esesiqtkha esahaeirnm kieltetlsl veklkseltd crkseargle
      241 lvsetrmqle vanktieklr sdatketevy nmllleleqs kgrvkslegl vsklqvelvg
      301 ngcikdpeqq neeneeikrv ktelnfakle isqlrsalde aevryqeeyi kstlqirsay
      361 eqvecikses sqkeakleae ltrtkanvee lrsqneglre selaaelkkl efdlkelkdn
      421 ltvketelnt iteqnkilkr eiesktksde pvvvlleask aaeraalmkv gylteetdks
      481 nrraarltee lesaqaante meaelkrlkv qanqwrkaae aatamlsnng kysdktipfd
      541 iaigspkwen idddddddpl kkknnmlrki gvlwkkgqk
//
LOCUS       XP_016687386             142 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S23 [Gossypium hirsutum].
ACCESSION   XP_016687386
VERSION     XP_016687386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831897.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..142
                     /product="40S ribosomal protein S23"
                     /calculated_mol_wt=15622
     Region          1..142
                     /region_name="PTZ00067"
                     /note="40S ribosomal S23; Provisional"
                     /db_xref="CDD:185422"
     Site            order(26,28..32,34,36..38,39..40,42..48,59..67,73..75,83,
                     85..88,101..107,110..113,119..120,125,127,137..139)
                     /site_type="other"
                     /note="18S rRNA interaction site [nucleotide binding]"
                     /db_xref="CDD:239465"
     Site            order(59..60,111)
                     /site_type="other"
                     /note="streptomycin interaction site [chemical binding]"
                     /db_xref="CDD:239465"
     Site            60..61
                     /site_type="other"
                     /note="28S rRNA interaction site [nucleotide binding]"
                     /db_xref="CDD:239465"
     Site            order(61..66,87..95)
                     /site_type="other"
                     /note="aminoacyl-tRNA interaction site (A-site)
                     [nucleotide binding]"
                     /db_xref="CDD:239465"
     Site            96
                     /site_type="other"
                     /note="eEF2 interaction site [polypeptide binding]"
                     /db_xref="CDD:239465"
     CDS             1..142
                     /gene="LOC107905281"
                     /coded_by="XM_016831897.2:223..651"
                     /db_xref="GeneID:107905281"
ORIGIN      
        1 mgktrgmgag rklrthrrrq rwadksykks nlgnewkkpf agsshakgiv lekigieakq
       61 pnsairkcar vqlikngkki aafvpndgcl nyieendevl iagfgrkgha vgdipgvrfk
      121 vvkvsgvsll alfkekkekp rs
//
LOCUS       XP_040943616             770 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943616
VERSION     XP_040943616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087682.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..770
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=81161
     CDS             1..770
                     /gene="LOC121202835"
                     /coded_by="XM_041087682.1:255..2567"
                     /db_xref="GeneID:121202835"
ORIGIN      
        1 mvdsekqsnf nmeglslidv sseddslins pladpinlks sekgsetktv rfavdpesve
       61 mavgsieeag kvkepsesse qektskngky nlrkslawds afftsegfle peelssmlgg
      121 nekgqlqalp giqedvnksy dslttldset ltlesleadl fedvrasiqk snkvsvtans
      181 sgkkelkttd tktvssskkv elptqdkkiq ikqkatpkkp nvgvkdsgkt vkqvvvhpqi
      241 sqtvrsvara gestsslhkp pkvlsgvght ptkraslgak nvkmdkdakt vtgrgttvlk
      301 tpalggsrni vprpklssks sscspasskt eltsscssle scasfssnrt nksslnlikh
      361 kngprivnps sgstisarsk iapkgkiqag sskpptclks stkfsssisp tssisewsse
      421 ssssisatnr ssnvvrdslg tgsrkglttk rdahqvldsq nlptgsegdd tevngsldes
      481 enkvsagtsr llhpgsvkps glrmpspklg ffdgvrssgh tpngsmlchs gvtsglpkig
      541 akstspsgns nkakivklqp vrsltviqsp kvdvkqtssa vksrsslsiq kspvaatkvp
      601 sslrnlktcp sispklqsts cprtsresys kaqgigsagk veivpldgvn qstadiaskt
      661 dvqntiasev enktygypcf kkeeapvedr ivavqkepia dfensmsipt ptspspmise
      721 vtcgsripfs vkdsfcntda sldvlsgstv aaekttvlpl sestlpenni
//
LOCUS       XP_040943617             770 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943617
VERSION     XP_040943617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087683.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..770
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=81161
     CDS             1..770
                     /gene="LOC121202835"
                     /coded_by="XM_041087683.1:255..2567"
                     /db_xref="GeneID:121202835"
ORIGIN      
        1 mvdsekqsnf nmeglslidv sseddslins pladpinlks sekgsetktv rfavdpesve
       61 mavgsieeag kvkepsesse qektskngky nlrkslawds afftsegfle peelssmlgg
      121 nekgqlqalp giqedvnksy dslttldset ltlesleadl fedvrasiqk snkvsvtans
      181 sgkkelkttd tktvssskkv elptqdkkiq ikqkatpkkp nvgvkdsgkt vkqvvvhpqi
      241 sqtvrsvara gestsslhkp pkvlsgvght ptkraslgak nvkmdkdakt vtgrgttvlk
      301 tpalggsrni vprpklssks sscspasskt eltsscssle scasfssnrt nksslnlikh
      361 kngprivnps sgstisarsk iapkgkiqag sskpptclks stkfsssisp tssisewsse
      421 ssssisatnr ssnvvrdslg tgsrkglttk rdahqvldsq nlptgsegdd tevngsldes
      481 enkvsagtsr llhpgsvkps glrmpspklg ffdgvrssgh tpngsmlchs gvtsglpkig
      541 akstspsgns nkakivklqp vrsltviqsp kvdvkqtssa vksrsslsiq kspvaatkvp
      601 sslrnlktcp sispklqsts cprtsresys kaqgigsagk veivpldgvn qstadiaskt
      661 dvqntiasev enktygypcf kkeeapvedr ivavqkepia dfensmsipt ptspspmise
      721 vtcgsripfs vkdsfcntda sldvlsgstv aaekttvlpl sestlpenni
//
LOCUS       XP_016687376             770 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687376
VERSION     XP_016687376.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831887.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..770
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=81161
     CDS             1..770
                     /gene="LOC121202835"
                     /coded_by="XM_016831887.2:255..2567"
                     /db_xref="GeneID:121202835"
ORIGIN      
        1 mvdsekqsnf nmeglslidv sseddslins pladpinlks sekgsetktv rfavdpesve
       61 mavgsieeag kvkepsesse qektskngky nlrkslawds afftsegfle peelssmlgg
      121 nekgqlqalp giqedvnksy dslttldset ltlesleadl fedvrasiqk snkvsvtans
      181 sgkkelkttd tktvssskkv elptqdkkiq ikqkatpkkp nvgvkdsgkt vkqvvvhpqi
      241 sqtvrsvara gestsslhkp pkvlsgvght ptkraslgak nvkmdkdakt vtgrgttvlk
      301 tpalggsrni vprpklssks sscspasskt eltsscssle scasfssnrt nksslnlikh
      361 kngprivnps sgstisarsk iapkgkiqag sskpptclks stkfsssisp tssisewsse
      421 ssssisatnr ssnvvrdslg tgsrkglttk rdahqvldsq nlptgsegdd tevngsldes
      481 enkvsagtsr llhpgsvkps glrmpspklg ffdgvrssgh tpngsmlchs gvtsglpkig
      541 akstspsgns nkakivklqp vrsltviqsp kvdvkqtssa vksrsslsiq kspvaatkvp
      601 sslrnlktcp sispklqsts cprtsresys kaqgigsagk veivpldgvn qstadiaskt
      661 dvqntiasev enktygypcf kkeeapvedr ivavqkepia dfensmsipt ptspspmise
      721 vtcgsripfs vkdsfcntda sldvlsgstv aaekttvlpl sestlpenni
//
LOCUS       XP_040943618             767 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943618
VERSION     XP_040943618.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087684.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..767
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=80792
     CDS             1..767
                     /gene="LOC121202835"
                     /coded_by="XM_041087684.1:255..2558"
                     /db_xref="GeneID:121202835"
ORIGIN      
        1 mvdsekqsnf nmeglslidv sseddslins pladpinlks sekgsetktv rfavdpesve
       61 mavgsieeag kvkepsesse qektskngky nlrkslawds afftsegfle peelssmlgg
      121 nekgqlqalp giqedvnksy dslttldset ltlesleadl fedvrasiqk snkvsvtans
      181 sgkkelkttd tktvssskkv elptqdkikq katpkkpnvg vkdsgktvkq vvvhpqisqt
      241 vrsvarages tsslhkppkv lsgvghtptk raslgaknvk mdkdaktvtg rgttvlktpa
      301 lggsrnivpr pklssksssc spassktelt sscsslesca sfssnrtnks slnlikhkng
      361 privnpssgs tisarskiap kgkiqagssk pptclksstk fsssisptss isewssesss
      421 sisatnrssn vvrdslgtgs rkglttkrda hqvldsqnlp tgsegddtev ngsldesenk
      481 vsagtsrllh pgsvkpsglr mpspklgffd gvrssghtpn gsmlchsgvt sglpkigaks
      541 tspsgnsnka kivklqpvrs ltviqspkvd vkqtssavks rsslsiqksp vaatkvpssl
      601 rnlktcpsis pklqstscpr tsresyskaq gigsagkvei vpldgvnqst adiasktdvq
      661 ntiasevenk tygypcfkke eapvedriva vqkepiadfe nsmsiptpts pspmisevtc
      721 gsripfsvkd sfcntdasld vlsgstvaae kttvlplses tlpenni
//
LOCUS       XP_040943619             761 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943619
VERSION     XP_040943619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087685.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..761
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=80173
     CDS             1..761
                     /gene="LOC121202835"
                     /coded_by="XM_041087685.1:255..2540"
                     /db_xref="GeneID:121202835"
ORIGIN      
        1 mvdsekqsnf nmeglslidv sseddslins pladpinlks sekgsetktv rfavdpesve
       61 mavgsieeag kvkepsesse qektskngky nlrkslawds afftsegfle peelssmlgg
      121 nekgqlqalp giqedvnksy dslttldset ltlesleadl fedvrasiqk snkvsvtans
      181 sgkkelkttd tktvssskkv elptqdkkiq ikqkatpkkp nvgvkdsgkt vkqtvrsvar
      241 agestsslhk ppkvlsgvgh tptkraslga knvkmdkdak tvtgrgttvl ktpalggsrn
      301 ivprpklssk ssscspassk teltsscssl escasfssnr tnksslnlik hkngprivnp
      361 ssgstisars kiapkgkiqa gsskpptclk sstkfsssis ptssisewss essssisatn
      421 rssnvvrdsl gtgsrkgltt krdahqvlds qnlptgsegd dtevngslde senkvsagts
      481 rllhpgsvkp sglrmpspkl gffdgvrssg htpngsmlch sgvtsglpki gakstspsgn
      541 snkakivklq pvrsltviqs pkvdvkqtss avksrsslsi qkspvaatkv psslrnlktc
      601 psispklqst scprtsresy skaqgigsag kveivpldgv nqstadiask tdvqntiase
      661 venktygypc fkkeeapved rivavqkepi adfensmsip tptspspmis evtcgsripf
      721 svkdsfcntd asldvlsgst vaaekttvlp lsestlpenn i
//
LOCUS       XP_040943620             758 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943620
VERSION     XP_040943620.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087686.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..758
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=79804
     CDS             1..758
                     /gene="LOC121202835"
                     /coded_by="XM_041087686.1:255..2531"
                     /db_xref="GeneID:121202835"
ORIGIN      
        1 mvdsekqsnf nmeglslidv sseddslins pladpinlks sekgsetktv rfavdpesve
       61 mavgsieeag kvkepsesse qektskngky nlrkslawds afftsegfle peelssmlgg
      121 nekgqlqalp giqedvnksy dslttldset ltlesleadl fedvrasiqk snkvsvtans
      181 sgkkelkttd tktvssskkv elptqdkikq katpkkpnvg vkdsgktvkq tvrsvarage
      241 stsslhkppk vlsgvghtpt kraslgaknv kmdkdaktvt grgttvlktp alggsrnivp
      301 rpklssksss cspassktel tsscsslesc asfssnrtnk sslnlikhkn gprivnpssg
      361 stisarskia pkgkiqagss kpptclksst kfsssispts sisewssess ssisatnrss
      421 nvvrdslgtg srkglttkrd ahqvldsqnl ptgsegddte vngsldesen kvsagtsrll
      481 hpgsvkpsgl rmpspklgff dgvrssghtp ngsmlchsgv tsglpkigak stspsgnsnk
      541 akivklqpvr sltviqspkv dvkqtssavk srsslsiqks pvaatkvpss lrnlktcpsi
      601 spklqstscp rtsresyska qgigsagkve ivpldgvnqs tadiasktdv qntiaseven
      661 ktygypcfkk eeapvedriv avqkepiadf ensmsiptpt spspmisevt cgsripfsvk
      721 dsfcntdasl dvlsgstvaa ekttvlplse stlpenni
//
LOCUS       XP_016687372             795 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687372
VERSION     XP_016687372.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831883.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..795
                     /product="uncharacterized protein"
                     /calculated_mol_wt=86920
     Region          239..321
                     /region_name="PWWP"
                     /note="PWWP (Pro-Trp-Trp-Pro) domain; cd05162"
                     /db_xref="CDD:438958"
     Site            order(248,251,278)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438958"
     Site            249..252
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438958"
     CDS             1..795
                     /gene="LOC107905277"
                     /coded_by="XM_016831883.2:151..2538"
                     /db_xref="GeneID:107905277"
ORIGIN      
        1 msqkvsdeid lncdavsvdr engdndvnir dsgtclkesv neageeskie svkdeevnle
       61 adigslgeev afgsgevskm evdgelkgng dgecvsvedk kpvvaeemav ksssevaedl
      121 nvgmcrsgds llegtsvrsi sivddathsg derlnsrdls henslpcgdq keslndrssc
      181 glesrdmeid ahddtkkkrn aenrssvlnd gvdsnqctst dededegvkp eepefcvsdl
      241 vwgkvrshpw wpgqifdysd asskakkyfk kgcyliayyg dqtfawnees rikpfrphfs
      301 rmekqnnmee fhnavdcald evsrrvefgl acsciskeay aevkteiivn agireessrr
      361 vggdrfstaa sfdpselvet mkalalsply sevdrlqftt sqaqllafhr wkgysqlpef
      421 lnvgglletd aeilffeeve tevpsskvek ekpdnqdkip agsckkeksl seflaerrls
      481 lqkvkrklnn nagdkltsss pvkklkavdt lhddsaskln ksyvspgsgd kslqskqtfr
      541 vgasilrvas llngstvssp lfkhcdgksq ksavnnkkkg ksmsgkspgk vsrtdasspt
      601 gihsqlcsaa tdplkdqgtd ditrekstgs kvtgrselas ikdsscsdri irclpeeqsp
      661 vdkdnetsev spntqptvqa svntdsepkh tvegeilgte tekqqiadsd esftkdqtpt
      721 alilnfsdid svpsvedlnk tfshygplvs pgaevfkkst rakvvfkrra daetafsssg
      781 kysifgpslv syrlk
//
LOCUS       XP_016687370             350 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SRG1 [Gossypium hirsutum].
ACCESSION   XP_016687370
VERSION     XP_016687370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="protein SRG1"
                     /calculated_mol_wt=39903
     Region          15..348
                     /region_name="PLN00417"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:177810"
     CDS             1..350
                     /gene="LOC107905275"
                     /coded_by="XM_016831881.2:92..1144"
                     /db_xref="GeneID:107905275"
ORIGIN      
        1 masssntlae vllsrrvqem vvngeqpvsl yicrdekdaq napisplapi piidlsllss
       61 ssteeelqkl ksalccwgcf qainhgipss fldeiqqvtr effrqsmeek kkyskgvvee
      121 megyggdpsp eqgqfldwqd rllltvyphd lrvpkfwpqn pqsfseilen ytckmrmvtk
      181 lvsksmaksl hleencfleq fgegatlqar fnhypccqrp dmvlglkphs dgtgytiilq
      241 dieglqilqn qqwltvptvp nalfilmgdq meimtngifk spvhrvitnk ekvrtsiavf
      301 ytpeknkeig pqdglvnedr prlfkhvkdy eiihwehyqr gmralhaaqv
//
LOCUS       XP_016687368             178 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-10 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016687368
VERSION     XP_016687368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831879.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..178
                     /product="nuclear transcription factor Y subunit B-10
                     isoform X1"
                     /calculated_mol_wt=19213
     Region          29..119
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(29,31..32,35,61,64..65,69,72..73,76..77,80,100..102,
                     104)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(32..37,40,44..45,48..50,53..56,59,62..63,66..71,
                     73..76,79,88..92,95,99,103..104,107,111,114,118..119)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(32,37..40,43,46,54..57,60,88..89)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..178
                     /gene="LOC107905274"
                     /coded_by="XM_016831879.2:243..779"
                     /db_xref="GeneID:107905274"
ORIGIN      
        1 matsapvpas pggggshesg geqsprsnvr eqerflpian isrimkkalp anakiakdak
       61 etvqecvsef isfitseasd kcqkekrkti ngddllwama tlgfedyidp lkiyltkyre
      121 megdtkgsvk ggdtfakkdv qpgpnaqlvh qgsfsqgvyy gnsqsqsqah mmasdarh
//
LOCUS       XP_040943621             166 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-10 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943621
VERSION     XP_040943621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087687.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..166
                     /product="nuclear transcription factor Y subunit B-10
                     isoform X2"
                     /calculated_mol_wt=17869
     Region          29..107
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(32,37..40,43,46,54..57,60,76..77)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..166
                     /gene="LOC107905274"
                     /coded_by="XM_041087687.1:198..698"
                     /db_xref="GeneID:107905274"
ORIGIN      
        1 matsapvpas pggggshesg geqsprsnvr eqerflpian isrimkkalp anakiakdak
       61 etvqeasdkc qkekrkting ddllwamatl gfedyidplk iyltkyreme gdtkgsvkgg
      121 dtfakkdvqp gpnaqlvhqg sfsqgvyygn sqsqsqahmm asdarh
//
LOCUS       XP_040943622             311 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 44 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943622
VERSION     XP_040943622.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087688.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..311
                     /product="beta-glucosidase 44 isoform X1"
                     /calculated_mol_wt=36322
     Region          <1..309
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..311
                     /gene="LOC107903154"
                     /coded_by="XM_041087688.1:81..1016"
                     /db_xref="GeneID:107903154"
ORIGIN      
        1 mtfneprvva algfdnginp pnrcskkfgn ctdgnsatep yiaahhlils haeavkryre
       61 kyqakqngri gifldfvwye pltrskadny aaqrardfhi gwflhpliyg kyprtmqkiv
      121 rerlpkftks evekvknsfd vlclnhytsy yiyephqpps nvtgyqqdwn agfayerngv
      181 pigrrahsew lyevpwgmyk aityvkkryg spniilseng mddpgnltfp eslydinrvs
      241 fyrsylkelk ramddganvs gyfawsildn fewllgytsr fglvyvdhnd lkrypklsay
      301 wfkqmlerkn s
//
LOCUS       XP_040943623             505 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 44 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943623
VERSION     XP_040943623.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087689.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..505
                     /product="beta-glucosidase 44 isoform X2"
                     /calculated_mol_wt=58667
     Region          33..501
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..505
                     /gene="LOC107903154"
                     /coded_by="XM_041087689.1:32..1549"
                     /db_xref="GeneID:107903154"
ORIGIN      
        1 mkplvillsf tffstilcan snlqqrfdtg glsresfpdg flfgtaasay qvegmasedg
       61 rgpsiwdafv ktpghianne tgevsidqyh rykedvdlmq mlnfdayrfs iswsrifpng
      121 tgevnwkgvd yynrlidyll ekvritphan lyhydlplal qekylglldr qviqdfadya
      181 efcfktfgdr vktwmtfnep rvvaalgfdn ginppnrcsk kfgnctdgns atepyiaahh
      241 lilshaeavk ryrekyqakq ngrigifldf vwyepltrsk adnyaaqrar dfhigwflhp
      301 liygkyprtm qkivrerlpk ftksevekvk nsfdvlclnh ytsyyiyeph qppsnvtgyq
      361 qdwnagfaye rngvpigrra hsewlyevpw gmykaityvk krygspniil sengmddpgn
      421 ltfpeslydi nrvsfyrsyl kelkramddg anvsgyfaws ildnfewllg ytsrfglvyv
      481 dhndlkrypk lsaywfkqml erkns
//
LOCUS       XP_016684686             504 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 44 [Gossypium hirsutum].
ACCESSION   XP_016684686
VERSION     XP_016684686.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684686.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..504
                     /product="beta-glucosidase 44"
                     /calculated_mol_wt=58475
     Region          33..500
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..504
                     /gene="LOC107903153"
                     /coded_by="XM_016829197.2:12..1526"
                     /db_xref="GeneID:107903153"
ORIGIN      
        1 mkplvillsf tffsttlyan shsqqhfdtg glsresfpeg flfgtaasay qvegmasedg
       61 rgpsiwdafv ktpghianne tgevsidqyh rykedvdlmq mlnfdayrfs iswsrifpng
      121 tgevnwkgvd yynrlidyll ekgitphanl yhydlplalq ekylglldrq viqdfadyae
      181 fcfktfgdrv ktwmtfnepr vvaalgfdng inppnrcskk fgnctdgnsa tepyiaahhl
      241 ilshaeavkr yrekyqakqn grigifldfv wyepltrska dnyaaqrard fhigwflhpl
      301 vygkyprtmq kivrerlpkf tksevekvkn sfdvlclnhy tsyyiyephq ppsnvtgyqq
      361 dwnagfayer ngvpigrrah sewlyevpwg mykavtyvkk hygspniils engmddpgnl
      421 tfpeslydin rvsfyrsylk elkramddga nvtgyfawsi ldnfewllgy tsrfglvyvd
      481 hndlkrypkl saywfkqmle rkns
//
LOCUS       XP_016684685             287 aa            linear   PLN 06-AUG-2024
DEFINITION  geranylgeranyl pyrophosphate synthase, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016684685
VERSION     XP_016684685.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829196.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684685.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..287
                     /product="geranylgeranyl pyrophosphate synthase,
                     chloroplastic"
                     /calculated_mol_wt=31186
     Region          6..>250
                     /region_name="IspA"
                     /note="Geranylgeranyl pyrophosphate synthase [Coenzyme
                     transport and metabolism]; COG0142"
                     /db_xref="CDD:439912"
     CDS             1..287
                     /gene="LOC107903152"
                     /coded_by="XM_016829196.2:16..879"
                     /db_xref="GeneID:107903152"
ORIGIN      
        1 mamkakkink mldeaiplrh plklneamry sllaggkrvr pilciascel vggdeslamp
       61 iacaiemiht aslihddlpc mdnddlrrgk ptnhkvfges tavlagdafl sfafehiacn
      121 tnnvspdrlv rifaelssvi gskglvagqf vdiesegkav slkeleyihv hktaklleac
      181 vvcgviiggg ndndiekvri yarfigllfq vvddildvtk ssvelgktag kdlvsnkaty
      241 pkvmgideak nfayhlmnqv vqqlacfdta kaaplyhlay cianrqn
//
LOCUS       XP_040943625             481 aa            linear   PLN 06-AUG-2024
DEFINITION  APETALA2-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943625
VERSION     XP_040943625.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087691.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..481
                     /product="APETALA2-like protein 3"
                     /calculated_mol_wt=53151
     Region          149..210
                     /region_name="AP2"
                     /note="DNA-binding domain found in transcription
                     regulators in plants such as APETALA2 and EREBP (ethylene
                     responsive element binding protein). In EREBPs the domain
                     specifically binds to the 11bp GCC box of the ethylene
                     response element (ERE), a promotor...; cl00033"
                     /db_xref="CDD:444663"
     Site            order(151..152,154,157,159,161,165,167,172,174,177)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     Region          241..304
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(243..244,246,248,250,252,256,258,265,267,270)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..481
                     /gene="LOC121214048"
                     /coded_by="XM_041087691.1:301..1746"
                     /db_xref="GeneID:121214048"
ORIGIN      
        1 mvldlnltvi sdgddnsmag gfsgynnnqm dssggsfgss vvnadtatta gdddsssnaa
       61 atdtfgysfd ilkasreeeq dkynnrttip lfpvdvegng wkstgwldla gsgevaaeqr
      121 vvphqhqqqv qlrqqvkksr rgprsrssqy rgvtfyrrtg rweshiwdcg kqvylggfdt
      181 ahaaaraydr aaikfrgtda dinfnvsdyd ddikqmsnft keefvhilrr qstgfsrgss
      241 kyrgvtlhkc grwearmgql lgkkyiylgl fdseieaara ydkaaikcng reavtnfeps
      301 tyegelises engdqnrvld lnlgiappct snlqkenens snfpfqrgyd glpvasgarf
      361 ensapatmrv qpslgqataf khvpnwnvan psffpvyrer aiekrievds ppwqiqgpyg
      421 gtkemplfps aassgfsssi itspsaaagq lrvpnatflq hhfhpvimns ntphfycrte
      481 r
//
LOCUS       XP_016687365             405 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L4 [Gossypium hirsutum].
ACCESSION   XP_016687365
VERSION     XP_016687365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831876.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..405
                     /product="60S ribosomal protein L4"
                     /calculated_mol_wt=44670
     Region          1..405
                     /region_name="PLN00185"
                     /note="60S ribosomal protein L4-1; Provisional"
                     /db_xref="CDD:177779"
     CDS             1..405
                     /gene="LOC107905270"
                     /coded_by="XM_016831876.2:158..1375"
                     /db_xref="GeneID:107905270"
ORIGIN      
        1 maaaarplvs vqtlesdmat natptvplad vmkasirpdl vtfvhdnisk nsrqpyavsk
       61 kaghqtsaes wgtgravsri prvpgggthr agqgafgnmc rggrmyaptk iwrrwhrkin
      121 vnqkryavas aiaasavpsl vmarghries vpemplvisd svesvektsa aikvlkqvga
      181 ypdvvkakds qgirpgkgkm rnrryisrkg plivygtegs klvkafrnip gvevanverl
      241 nllklapggh lgrfiiwtks ayekldsvyg sfekpsekkk ryvlprskmv nadlgriins
      301 devqsvvkpi kkeikraplk knplknlnam lklnpyakta rrmsllaeaq rvkakkekld
      361 kkrkpiskee ataiksagka wyqtmisdsd ytefenfskw lgvsq
//
LOCUS       XP_016687364             353 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein
            11-like [Gossypium hirsutum].
ACCESSION   XP_016687364
VERSION     XP_016687364.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831875.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687364.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..353
                     /product="LOW QUALITY PROTEIN: zinc finger CCCH
                     domain-containing protein 11-like"
                     /calculated_mol_wt=39994
     Region          1..310
                     /region_name="COG5252"
                     /note="Uncharacterized conserved protein, contains
                     CCCH-type Zn-finger protein [General function prediction
                     only]"
                     /db_xref="CDD:227577"
     CDS             1..353
                     /gene="LOC107905268"
                     /coded_by="XM_016831875.2:187..1248"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107905268"
ORIGIN      
        1 mppkqaskad lakkqkiied ktfglknknk sknvqkyvqn lkqsvqpkpd psktaqkkkk
       61 eeekakekel ndlfkiavtq pkvpvgvdpk silcefykag qcvkgfkckf shdlnvqrkg
      121 ekidiysdkr dqetmedwdq atlekvvesk gkeyqqnkpt divckyflea vekkqygwfw
      181 vcpnggkdch yrhalppgyv lksqmkalie eesekxpied eienqrakvk tstpmtpelf
      241 mewkkkkiae rdeglaaqra erakndrmsg relfmsdasl fvddaeayek yqreeesdap
      301 enkansdsaa ptgpstagvp dddddeldid elneleasls ktsiqiqeps aet
//
LOCUS       XP_040943626             848 aa            linear   PLN 06-AUG-2024
DEFINITION  TBC1 domain family member 2B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943626
VERSION     XP_040943626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087692.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..848
                     /product="TBC1 domain family member 2B isoform X1"
                     /calculated_mol_wt=96568
     Region          <39..>239
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          296..516
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          <642..>800
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..848
                     /gene="LOC107902623"
                     /coded_by="XM_041087692.1:154..2700"
                     /db_xref="GeneID:107902623"
ORIGIN      
        1 mllsllsrrs leadsrdayg favrpqniqt yreyldiykq eeeeriekwk iflkrnseee
       61 dgetlqrdap evknkarlhe enketlpaea hevnedasie aseetaskkq yevtlqteat
      121 rlnkdaasee cketlqgeva evkeevdsse kskdtsetea telkeeadta glsesetgtr
      181 nshsmenare kemklteetk trkvnrwakt rpalraienl mslrvkrknm knrnmngsec
      241 hlpsvkears seresevefe ekvcvneisa tegsnadnea ydesffpwke elqslvhggv
      301 pkdlrgevwq afvgvkarrv kryyndllaq ennddddqhs nspgvfrkwr kqiekdlprt
      361 fpghpalndr grdtlrrlll ayarhnpsvg ycqamnffag lllllmpeen afwtlvgiid
      421 dyfdgyytee miesqvdqlv feelmrerfp klvnhldylg vqvawistpw flsifvnmlp
      481 wesvlriwdv ilfegnrvml frtalalmel hvpalvttkd agdvitmlqs lagstfdssq
      541 lvltacmgfl avtegklqkl rekhrptvlm ivkeraqgaq vsknskgiat klysfkqnrg
      601 qeetnpaedd gngckleprs sdldkllcsl nadlevgslp slrdqvdrmk velcrlleek
      661 raailradel eialmeltke dnrqelneki eqleqevadq hqalafkreq eaamlkvleq
      721 leqeqrivee arkkaekeaa alreanaelq ekyekalasn aemqkrvvma esmleatlqy
      781 esgqakpqts qtqransgrk gggilsfglg lrdkikgihn veeptdgksn qsateeetnt
      841 edgeknss
//
LOCUS       XP_040943627             699 aa            linear   PLN 06-AUG-2024
DEFINITION  TBC1 domain family member 2B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943627
VERSION     XP_040943627.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087693.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..699
                     /product="TBC1 domain family member 2B isoform X2"
                     /calculated_mol_wt=80029
     Region          <39..>239
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          296..516
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..699
                     /gene="LOC107902623"
                     /coded_by="XM_041087693.1:161..2260"
                     /db_xref="GeneID:107902623"
ORIGIN      
        1 mllsllsrrs leadsrdayg favrpqniqt yreyldiykq eeeeriekwk iflkrnseee
       61 dgetlqrdap evknkarlhe enketlpaea hevnedasie aseetaskkq yevtlqteat
      121 rlnkdaasee cketlqgeva evkeevdsse kskdtsetea telkeeadta glsesetgtr
      181 nshsmenare kemklteetk trkvnrwakt rpalraienl mslrvkrknm knrnmngsec
      241 hlpsvkears seresevefe ekvcvneisa tegsnadnea ydesffpwke elqslvhggv
      301 pkdlrgevwq afvgvkarrv kryyndllaq ennddddqhs nspgvfrkwr kqiekdlprt
      361 fpghpalndr grdtlrrlll ayarhnpsvg ycqamnffag lllllmpeen afwtlvgiid
      421 dyfdgyytee miesqvdqlv feelmrerfp klvnhldylg vqvawistpw flsifvnmlp
      481 wesvlriwdv ilfegnrvml frtalalmel hvpalvttkd agdvitmlqs lagstfdssq
      541 lvltacmgfl avtegklqkl rekhrptvlm ivkeraqgaq vsknskgiat klysfkqnrg
      601 qeetnpaedd gngckleprs sdldkllcsl nadlevgslp slrdqvdrmk velcrlleek
      661 raailradel eialmeltke dnrqelnekd lrfvdnaad
//
LOCUS       XP_040943628             697 aa            linear   PLN 06-AUG-2024
DEFINITION  TBC1 domain family member 2B isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943628
VERSION     XP_040943628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087694.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..697
                     /product="TBC1 domain family member 2B isoform X3"
                     /calculated_mol_wt=79745
     Region          <39..>239
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          296..516
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..697
                     /gene="LOC107902623"
                     /coded_by="XM_041087694.1:161..2254"
                     /db_xref="GeneID:107902623"
ORIGIN      
        1 mllsllsrrs leadsrdayg favrpqniqt yreyldiykq eeeeriekwk iflkrnseee
       61 dgetlqrdap evknkarlhe enketlpaea hevnedasie aseetaskkq yevtlqteat
      121 rlnkdaasee cketlqgeva evkeevdsse kskdtsetea telkeeadta glsesetgtr
      181 nshsmenare kemklteetk trkvnrwakt rpalraienl mslrvkrknm knrnmngsec
      241 hlpsvkears seresevefe ekvcvneisa tegsnadnea ydesffpwke elqslvhggv
      301 pkdlrgevwq afvgvkarrv kryyndllaq ennddddqhs nspgvfrkwr kqiekdlprt
      361 fpghpalndr grdtlrrlll ayarhnpsvg ycqamnffag lllllmpeen afwtlvgiid
      421 dyfdgyytee miesqvdqlv feelmrerfp klvnhldylg vqvawistpw flsifvnmlp
      481 wesvlriwdv ilfegnrvml frtalalmel hvpalvttkd agdvitmlqs lagstfdssq
      541 lvltacmgfl avtegklqkl rekhrptvlm ivkeraqgaq vsknskgiat klysfkqnrg
      601 qeetnpaedd gngckleprs sdldkllcsl nadlevgslp slrdqvdrmk velcrlleek
      661 raailradel eialmeltke dnrqelnekl lagfevc
//
LOCUS       XP_016687363             399 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL7 [Gossypium hirsutum].
ACCESSION   XP_016687363
VERSION     XP_016687363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831874.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..399
                     /product="probable serine/threonine-protein kinase PBL7"
                     /calculated_mol_wt=44111
     Region          80..349
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(80..84,88,101,103,132,148..151,155,157,201,203,
                     205..206,208,219,222,240..243)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(80..84,88,101,103,132,148..151,155,201,203,205..206,
                     208,219)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(84,155,157,201,203,205,222,240..243)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(218..225,236..243)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..399
                     /gene="LOC107905267"
                     /coded_by="XM_016831874.2:253..1452"
                     /db_xref="GeneID:107905267"
ORIGIN      
        1 mgwlpcsgks ntkankskkk kkmeemaldr lkptsekskt dslssgetsn rggsehiaaq
       61 tfpfrelama tknfssecll geggfgrvyk grlesinqiv aikqldrngl qgnreflvev
      121 lmlsllhhpn lvnltgycad gdqrllvyey mplgsledhl hdispskkrl dwstrmkiaa
      181 gaakgleylh dkasppviyr dlkcsnilla egyfpklsdf glaklgpvgd nthvstrvmg
      241 tygycapeya mtgqltvksd vysfgvvlle iitgrkaidn skaageqnlv awarplfkdr
      301 kmfsqmadpm lqgqypprgl fqalavaamc vqeqpnmrpl iadvvtalty ltsqkfkpdt
      361 qpiqgsrlmp gtpprtkrdr dkklnggnss erdrtrrls
//
LOCUS       XP_016687362             368 aa            linear   PLN 06-AUG-2024
DEFINITION  thylakoid membrane protein TERC, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016687362
VERSION     XP_016687362.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831873.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..368
                     /product="thylakoid membrane protein TERC, chloroplastic"
                     /calculated_mol_wt=40359
     Region          102..365
                     /region_name="DUF475"
                     /note="Protein of unknown function (DUF475); cl10468"
                     /db_xref="CDD:471974"
     CDS             1..368
                     /gene="LOC107905266"
                     /coded_by="XM_016831873.2:182..1288"
                     /db_xref="GeneID:107905266"
ORIGIN      
        1 mglasavhhg ggirislnfh lrvasvsptv qlprwtgfrf snhrvsivhs vshnrrticf
       61 pvsrskgmeq edhlsreeer rasnsyadsq eklqkseaya ssvktvafwv csavafgvgl
      121 glkegvgkas effagyileq slsvdnlfvf vlifkyfkvp pmyqnrvlsy giagavffrl
      181 slillgtatl qrfeavnlll aavllfssfk lfsndegdtd lsdnfivktc qrfipvtsny
      241 dgnkfitkrd niwqatplll tvavielsdi afavdsipav fgvtrdpfiv ftsnifailg
      301 lrslytliae gmadleylqp siavvlgfig ckmildffgf histeaslgf vatslsagvl
      361 lslakkad
//
LOCUS       XP_016687360             252 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687360
VERSION     XP_016687360.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831871.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=29290
     CDS             1..252
                     /gene="LOC107905265"
                     /coded_by="XM_016831871.2:580..1338"
                     /db_xref="GeneID:107905265"
ORIGIN      
        1 mffglamsmn sriffrclvw wiffscfsgl issavvrlds ieiynthewi teptvyfvck
       61 genmtvlpdv tkadtvytfk geeswqkgqk ailllvqgpp wdfyryieiq etnepltelk
      121 skkckrcgfy ekdtfksddv fdewefcasd fkangkyilf kekelnvtfn ceectslpag
      181 tfntdtnndn kgnelrvaii vlivlvastv tifglmmayk ywqkrkrqqd qarflklfee
      241 gddledelel gn
//
LOCUS       XP_040943629             251 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943629
VERSION     XP_040943629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087695.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=29161
     CDS             1..251
                     /gene="LOC107905265"
                     /coded_by="XM_041087695.1:257..1012"
                     /db_xref="GeneID:107905265"
ORIGIN      
        1 mffglamsmn sriffrclvw wiffscfsgl issavvrlds ieiynthewi teptvyfvck
       61 genmtvlpdv tkadtvytfk geeswqgqka illlvqgppw dfyryieiqe tnepltelks
      121 kkckrcgfye kdtfksddvf dewefcasdf kangkyilfk ekelnvtfnc eectslpagt
      181 fntdtnndnk gnelrvaiiv livlvastvt ifglmmayky wqkrkrqqdq arflklfeeg
      241 ddledelelg n
//
LOCUS       XP_016687361             224 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687361
VERSION     XP_016687361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831872.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..224
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=25958
     CDS             1..224
                     /gene="LOC107905265"
                     /coded_by="XM_016831872.2:268..942"
                     /db_xref="GeneID:107905265"
ORIGIN      
        1 mffglamsmn sriffrclvw wiffscfsgl issavvrlds ieiynthewi teptvyfvck
       61 genmtvlpdv tkadtvytfk geeswqplte lkskkckrcg fyekdtfksd dvfdewefca
      121 sdfkangkyi lfkekelnvt fnceectslp agtfntdtnn dnkgnelrva iivlivlvas
      181 tvtifglmma ykywqkrkrq qdqarflklf eegddledel elgn
//
LOCUS       XP_016687353             285 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RS2Z33 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016687353
VERSION     XP_016687353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831864.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="serine/arginine-rich splicing factor RS2Z33
                     isoform X1"
                     /calculated_mol_wt=32484
     Region          12..81
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <94..141
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..285
                     /gene="LOC107905262"
                     /coded_by="XM_016831864.2:132..989"
                     /db_xref="GeneID:107905262"
ORIGIN      
        1 mrryddrych trlyvghiss rtrtrdlerl fsrygrildv dmkrdyafvd fsdprdadda
       61 rysldgrdfd gsrivvefar gvprgsqeyl grgpppgsgr cfncgvdghw ardctaedwk
      121 nkcyrcgerg hierncrnsp rklsssrspi rsrsprrgrs rgrsysrgls ysrsrspvrr
      181 ehsfrlespe aenspslskg rnhspsprnr klsalqdead yddhspkevn rspaspdrde
      241 spdrsqyrss sdgngrslsp svrdnnspvd veyddpltpr gsasp
//
LOCUS       XP_016687354             284 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RS2Z33 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016687354
VERSION     XP_016687354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831865.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..284
                     /product="serine/arginine-rich splicing factor RS2Z33
                     isoform X2"
                     /calculated_mol_wt=32396
     Region          12..81
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <94..141
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..284
                     /gene="LOC107905262"
                     /coded_by="XM_016831865.2:67..921"
                     /db_xref="GeneID:107905262"
ORIGIN      
        1 mrryddrych trlyvghiss rtrtrdlerl fsrygrildv dmkrdyafvd fsdprdadda
       61 rysldgrdfd gsrivvefar gvprgsqeyl grgpppgsgr cfncgvdghw ardctaedwk
      121 nkcyrcgerg hierncrnsp rklssrspir srsprrgrsr grsysrglsy srsrspvrre
      181 hsfrlespea enspslskgr nhspsprnrk lsalqdeady ddhspkevnr spaspdrdes
      241 pdrsqyrsss dgngrslsps vrdnnspvdv eyddpltprg sasp
//
LOCUS       XP_016687355             278 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RS2Z33 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016687355
VERSION     XP_016687355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..278
                     /product="serine/arginine-rich splicing factor RS2Z33
                     isoform X3"
                     /calculated_mol_wt=31769
     Region          12..81
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <94..141
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..278
                     /gene="LOC107905262"
                     /coded_by="XM_016831866.2:67..903"
                     /db_xref="GeneID:107905262"
ORIGIN      
        1 mrryddrych trlyvghiss rtrtrdlerl fsrygrildv dmkrdyafvd fsdprdadda
       61 rysldgrdfd gsrivvefar gvprgsqeyl grgpppgsgr cfncgvdghw ardctaedwk
      121 nkcyrcgerg hierncrnsp rklrsrsprr grsrgrsysr glsysrsrsp vrrehsfrle
      181 speaenspsl skgrnhspsp rnrklsalqd eadyddhspk evnrspaspd rdespdrsqy
      241 rsssdgngrs lspsvrdnns pvdveyddpl tprgsasp
//
LOCUS       XP_016687357             244 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RS2Z33 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_016687357
VERSION     XP_016687357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831868.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..244
                     /product="serine/arginine-rich splicing factor RS2Z33
                     isoform X4"
                     /calculated_mol_wt=27353
     Region          <1..40
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <53..100
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..244
                     /gene="LOC107905262"
                     /coded_by="XM_016831868.2:435..1169"
                     /db_xref="GeneID:107905262"
ORIGIN      
        1 mkrdyafvdf sdprdaddar ysldgrdfdg srivvefarg vprgsqeylg rgpppgsgrc
       61 fncgvdghwa rdctaedwkn kcyrcgergh ierncrnspr klsssrspir srsprrgrsr
      121 grsysrglsy srsrspvrre hsfrlespea enspslskgr nhspsprnrk lsalqdeady
      181 ddhspkevnr spaspdrdes pdrsqyrsss dgngrslsps vrdnnspvdv eyddpltprg
      241 sasp
//
LOCUS       XP_040943630             243 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RS2Z33 isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_040943630
VERSION     XP_040943630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087696.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..243
                     /product="serine/arginine-rich splicing factor RS2Z33
                     isoform X5"
                     /calculated_mol_wt=27266
     Region          <1..40
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <53..100
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..243
                     /gene="LOC107905262"
                     /coded_by="XM_041087696.1:435..1166"
                     /db_xref="GeneID:107905262"
ORIGIN      
        1 mkrdyafvdf sdprdaddar ysldgrdfdg srivvefarg vprgsqeylg rgpppgsgrc
       61 fncgvdghwa rdctaedwkn kcyrcgergh ierncrnspr klssrspirs rsprrgrsrg
      121 rsysrglsys rsrspvrreh sfrlespeae nspslskgrn hspsprnrkl salqdeadyd
      181 dhspkevnrs paspdrdesp drsqyrsssd gngrslspsv rdnnspvdve yddpltprgs
      241 asp
//
LOCUS       XP_040943631             237 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RS2Z33 isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_040943631
VERSION     XP_040943631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087697.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..237
                     /product="serine/arginine-rich splicing factor RS2Z33
                     isoform X6"
                     /calculated_mol_wt=26638
     Region          <1..40
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <53..100
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..237
                     /gene="LOC107905262"
                     /coded_by="XM_041087697.1:435..1148"
                     /db_xref="GeneID:107905262"
ORIGIN      
        1 mkrdyafvdf sdprdaddar ysldgrdfdg srivvefarg vprgsqeylg rgpppgsgrc
       61 fncgvdghwa rdctaedwkn kcyrcgergh ierncrnspr klrsrsprrg rsrgrsysrg
      121 lsysrsrspv rrehsfrles peaenspsls kgrnhspspr nrklsalqde adyddhspke
      181 vnrspaspdr despdrsqyr sssdgngrsl spsvrdnnsp vdveyddplt prgsasp
//
LOCUS       XP_016687358             238 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione S-transferase L3 [Gossypium hirsutum].
ACCESSION   XP_016687358
VERSION     XP_016687358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..238
                     /product="glutathione S-transferase L3"
                     /calculated_mol_wt=27373
     Region          29..106
                     /region_name="GST_N_3"
                     /note="Glutathione S-transferase, N-terminal domain;
                     pfam13417"
                     /db_xref="CDD:433190"
     Region          111..231
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
     Site            order(112,119,171,174..175,178,182)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198286"
     Site            order(112..113,116..117,120,150)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198286"
     Site            order(119,122..123,179,182)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198286"
     CDS             1..238
                     /gene="LOC107905263"
                     /coded_by="XM_016831869.2:305..1021"
                     /db_xref="GeneID:107905263"
ORIGIN      
        1 matetveslp ptleanaeqp plfdgttrly tsypcpfaqr vwitrnykgl qdeiklvpln
       61 lqnrpawyke kvypvnkvps lehngkiige sldlikyvds nfegpslvpn dpdkkrtlee
      121 llsytdkfme mlfasfkgdp ekeagaafny ledalkkydd gpfllgrdfs ladiayipfv
      181 erfqiflsev fkydtiagrp klaawieeln kidaykqtkt vdpkqlveyy kqrfmaqk
//
LOCUS       XP_016687359             199 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687359
VERSION     XP_016687359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..199
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22209
     Region          76..167
                     /region_name="YkgJ"
                     /note="Uncharacterized protein YkgJ, contains CxxCxxCC
                     motif [General function prediction only]; COG0727"
                     /db_xref="CDD:440491"
     CDS             1..199
                     /gene="LOC107905264"
                     /coded_by="XM_016831870.2:314..913"
                     /db_xref="GeneID:107905264"
ORIGIN      
        1 millvtivyp ilhtskykis ilqvfestkm shitalpsfe ivcsahkvgr kgkktapktk
       61 pskdtmgfss grkeiwrcve ncgaccklak gpafatpeei fsdpsdiely rsligpdgwc
      121 ihyekntrtc siypdrpyfc rvepdifkkl ygienrkfnk eacsccrdti kaiygpnske
      181 lknfntsind sssalstgv
//
LOCUS       XP_016687352             714 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 20 [Gossypium hirsutum].
ACCESSION   XP_016687352
VERSION     XP_016687352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..714
                     /product="ABC transporter G family member 20"
                     /calculated_mol_wt=79507
     Region          85..713
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..714
                     /gene="LOC107905261"
                     /coded_by="XM_016831863.2:82..2226"
                     /db_xref="GeneID:107905261"
ORIGIN      
        1 mlksnqmklp lfnntsqqme lqkhpkksns tlaellmrvd dahsdvsgnn tpadnrvvdv
       61 gfsctslpls npfglsftnl sysvkvrkkw gkkvenskvl lnnisgeare geimavlgas
      121 gsgkstlida lanriskesl kgsitlnget leskllrvis ayvmqddllf pmltveetlm
      181 fsaefrlprs lskkkkkarv qalidqlglr kaaqtvigde ghrgvsgger rrvsigtdii
      241 hdpivlflde ptsgldstsa fmvvkvlqri aqsgsivims ihqpsyrimn lldrliflsr
      301 gntvyngsps slprfftefg hpipenenkt efaldlirel eenshggtka lvefnkqwqa
      361 rrkprtiitr kpnfslkeai iasisrgklv sgatnesslp dfanpfwiei iviakrsitn
      421 skrmpelfai rlgavlitgf ilatmfwqld dspkgiqerl gffafamstt fytcaeaipv
      481 flqekyifmr etaynayrrs syvlaqslis ipsllilsit fagttffsvg laggsagfff
      541 ffltilasfw agssfvtfls givphvmlgf tivvailayf llfsgffisk nriplywlwf
      601 hyislvkypy egvlrnefdd pnkcfvrgvq mfdgsplgta seamklklle smssvlgvni
      661 sgstcvttgk dllvqqgisd iskwdclwii vgwgfffrvl fyftlllgsk nkrr
//
LOCUS       XP_016684684             505 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 44 [Gossypium hirsutum].
ACCESSION   XP_016684684
VERSION     XP_016684684.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684684.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..505
                     /product="beta-glucosidase 44"
                     /calculated_mol_wt=58619
     Region          34..501
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..505
                     /gene="LOC107903150"
                     /coded_by="XM_016829195.2:10..1527"
                     /db_xref="GeneID:107903150"
ORIGIN      
        1 mevlvillsf tflssnlwen snaqqqhfdt gglsrdsfpe gflfgtaasa yqvegmased
       61 grgpsiwday vkipghiann dtgevsidqy hrykedvdlm qtlnfdayrf siswsrifpn
      121 gtgevnwkgv dyynrlidyl lekgitphan lyhydlplal qekylglldr qviqdfadya
      181 efcfktfgdr vktwmtfnep rvvaalgfdn ginppnrcsk qfgnctdgns atepyiaahh
      241 lilshaeavk ryrekyqdkq ngrigifldf vwyepltrsk adnyaaqrar dfhigwflhp
      301 lvygkyprtm qkivgerlpk ftksevekik nsfdvlclnh ytsyyiydph rppsnvtgyq
      361 qdwnagfaye rngvpigrra hsewlyevpw gmykvvtyvk erygnpniil sengmddpgn
      421 ltfpeslyds nrvnfyrsyl kelkramddg anvsgyfaws ildnfewllg ytsrfglvyv
      481 dhndlkrypk lsaywfkqml erkds
//
LOCUS       XP_040943632             513 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucosidase 44 [Gossypium hirsutum].
ACCESSION   XP_040943632
VERSION     XP_040943632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087698.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..513
                     /product="beta-glucosidase 44"
                     /calculated_mol_wt=59650
     Region          34..509
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..513
                     /gene="LOC107902621"
                     /coded_by="XM_041087698.1:10..1551"
                     /db_xref="GeneID:107902621"
ORIGIN      
        1 mevlvillsf tflssnlwen snaqqqhfdt gglsrdsfpe gflfgtaasa yqvegmased
       61 grgpsiwday vkipghiann dtgevsidqy hrykedvdlm qtlnfdayrf siswsrnfpn
      121 gtgevnwkgv dyynrlidyl lekgitphan lyhydlplal qekylglldr qviqdfadya
      181 efcfktfgdr vktwmtfnep rvvaalgfdn ginppnrcsk qfgnctdgns atepyiaahh
      241 lilshaeavk rycekyqvif sfffydkqng rigifldfvw yepltrskad nyaaqrardf
      301 higwflhplv ygkyprtmqk ivgerlpkft ksevekmkns fdvlclnhyt syyiydphrp
      361 psnvtgyqqd wnagfayern gvpigrrahs ewlyevpwgm ykvvtyvker ygnpniilse
      421 ngmddpgnlt fpeslydsnr vnfyrsylke lkramddgan isgyfawsil dnfewllgyt
      481 srfglvyvdh ndlkrypkls aywfkqmler kds
//
LOCUS       XP_016687351            1061 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-transporting ATPase 1, endoplasmic reticulum-type
            [Gossypium hirsutum].
ACCESSION   XP_016687351
VERSION     XP_016687351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831862.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1061
                     /product="calcium-transporting ATPase 1, endoplasmic
                     reticulum-type"
                     /calculated_mol_wt=116074
     Region          27..1043
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(383..387,654..655,713,731..732,735..736)
                     /site_type="active"
                     /db_xref="CDD:319763"
     CDS             1..1061
                     /gene="LOC107905259"
                     /coded_by="XM_016831862.2:225..3410"
                     /db_xref="GeneID:107905259"
ORIGIN      
        1 mgkggenygk refvnskptd pdvfpawakd ihecekhydv sqksglstae venrrriygn
       61 nelekhegqs iwslimeqfn dtlvrillla avvsfvlawy dgdeggemei tafveplvif
      121 lilivnaivg vwqennaeka lealkeiqse qatvirdgik ipslpakelv pgdivelkvg
      181 dkvpadmrvl elvsstlrve qgsltgesea vnktnksvse dadiqgkrsm vfagttvvng
      241 ncfclvtqig meteigkvht qihvasqsee dtplkkklne fgevltmiig vicifvwlin
      301 vkyflsweyi dgwprnfkfs fekctyyfei avalavaaip eglpavittc lalgtrkmaq
      361 knalvrklps vetlgcttvi csdktgtltt nqmavaklla mgghasslrn frvdgttynp
      421 sdgkihgwps ggmdanleti akisaicnda gvthsdnkyv ahgmpteaai kvlvekmglp
      481 kglysggaag ndvlrccqww neyehriatl efdrdrksmg vivksksgrr sllvkgaven
      541 llersskmql ldgsvvpldq nsrilvsnal qdmssgalrc lgfaykdelp efetydgsdd
      601 hpahallldp snypsiesnl tfvglvglrd pprqevhqai edckaagirv mvitgdnknt
      661 aeaicreigv fgpmedissk sltgkefmal sdkkahlrqs ggllfsraep rhkqeivrll
      721 kedgevvamt gdgvndapal kladigiamg iagtevakea sdmvladdnf stivsavgeg
      781 rsiydnmkaf irymissnig evasifltaa lgipeglipv qllwvnlvtd gppatalgfn
      841 ppdkdimkkp prrsddslit awilfrylvi glyvgvatvg vfiiwythgs flgidlsgdg
      901 htlvtypqla nwaqcsswkn ftvspftagn qvfsfennpc dyfqggkvka mtlslsvlva
      961 iemfnslnal sedgslltmp pwvnpwllla msvsfglhfl ilyvpflaqv fgivplsfne
     1021 wllvlavafp vilidevlkf vgrlgrrmrs ssqrplkpkt e
//
LOCUS       XP_016684683             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684683
VERSION     XP_016684683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17365
     CDS             1..150
                     /gene="LOC107903149"
                     /coded_by="XM_016829194.2:143..595"
                     /db_xref="GeneID:107903149"
ORIGIN      
        1 mssvcisncl ndakdpkkpm ratymnlykw pgsdaeflrs rtssvpssmd ycrpsvrvid
       61 siscrqmylr syrfskkatv pektmkcfgk vkekmghggr kkkksshrrv rvvikrkcli
      121 wrkvkvvlfr vfnrllscya svdvldqrnv
//
LOCUS       XP_016684257             241 aa            linear   PLN 06-AUG-2024
DEFINITION  probable membrane-associated kinase regulator 3 [Gossypium
            hirsutum].
ACCESSION   XP_016684257
VERSION     XP_016684257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828768.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..241
                     /product="probable membrane-associated kinase regulator 3"
                     /calculated_mol_wt=26359
     CDS             1..241
                     /gene="LOC107902619"
                     /coded_by="XM_016828768.2:87..812"
                     /db_xref="GeneID:107902619"
ORIGIN      
        1 mettqasynn gdeedyidie vsssssnllf ypitsppspq fefqtcssfy geiasttspa
       61 delfykgkll plhlpprlqm lqsllqteeh csymasssss gfignnlkks wcrklkqikq
      121 stitqklksl fnksgcsyec ccvkasvntn gshrrsfsgv iqrystpims lstsssssss
      181 sssssfsfgs ggfgdlhllk rsnslnseve ssiqgaivhc kmsqklsssk ekkmqnelwg
      241 l
//
LOCUS       XP_016687350             636 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component EXO70H1 [Gossypium hirsutum].
ACCESSION   XP_016687350
VERSION     XP_016687350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831861.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..636
                     /product="exocyst complex component EXO70H1"
                     /calculated_mol_wt=72034
     Region          242..604
                     /region_name="Exo70"
                     /note="Exo70 exocyst complex subunit; pfam03081"
                     /db_xref="CDD:460798"
     CDS             1..636
                     /gene="LOC107905258"
                     /coded_by="XM_016831861.2:101..2011"
                     /db_xref="GeneID:107905258"
ORIGIN      
        1 mprkgmrslc fsprtpsfst yhqsttsest asstnrrrfs esmieqtida aatiimkwda
       61 dtsayakvts lfyeskreal qfirsvnelq ktmhllvsdq gsrseklvra qilmqtamkr
      121 lqkefyqils mnrahldpes istrsswtsa rsstsdfddd deirtagdsi seieevssma
      181 msdlkliadc miasgyakec mhiykiirks iidegiyklg ieklsssqvn kmdwdvldlk
      241 iknwleaeki sirtlftger ilcdqvfats dlikescfte iskeaaillf gfpelvaktk
      301 kyspekmfrv ldmysaised wkeietifsf eststvrlqs ldslvrlses vrsllmdfes
      361 tiqkdssktm ipggglhplt issmnyltll adysniltdi isdwpppaks tlpasflfsp
      421 dsedstapai svrfvwlilv llckldgkak hykdvslsyl flannlqhvi srvrksnlqy
      481 ilgeewitkh eakvkqftsn yeplawgevf aslpenpkap itagkakdcf rkfnasfena
      541 ywkqrscivp dsklreeikv sigtklvtly rdfynthist vgdersarlf vrfspedign
      601 yfsdlfygtv ssgssstsss vsshhrrqml rsplrv
//
LOCUS       XP_016687349             436 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucuronic acid decarboxylase 1 [Gossypium hirsutum].
ACCESSION   XP_016687349
VERSION     XP_016687349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..436
                     /product="UDP-glucuronic acid decarboxylase 1"
                     /calculated_mol_wt=49028
     Region          1..435
                     /region_name="PLN02166"
                     /note="dTDP-glucose 4,6-dehydratase"
                     /db_xref="CDD:165812"
     CDS             1..436
                     /gene="LOC107905257"
                     /coded_by="XM_016831860.2:230..1540"
                     /db_xref="GeneID:107905257"
ORIGIN      
        1 mkqlhkqssi nhrrdeeili pqtppyspks lkhprslprs inylfkeqrl lfifigilig
       61 stffilqptl srlgptethp sipksfsnnv vshtqefsvs nqnpihgkmg rvpvgigrrr
      121 mrivvtggag fvgshlvdkl igrgdevivi dnfftgrken vvhlfgnprf elirhdvvep
      181 illevdqiyh lacpaspvhy kynpvktikt nvmgtlnmlg lakrvgarfl ltstsevygd
      241 plqhpqkety wgnvnpiger scydegkrta etltmdyhrg dgvevriari fntygprmcl
      301 ddgrvvsnfv aqairkqpmt vygdgkqtrs fqyvsdlvdg lvalmegehi gpfnlgnpge
      361 ftmlelaevv kdtidpsati eykpntaddp hmrkpdiska kellnwepki plreglplmv
      421 ndfrnrilne degkga
//
LOCUS       XP_040943633             197 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SODIUM POTASSIUM ROOT DEFECTIVE 3 [Gossypium hirsutum].
ACCESSION   XP_040943633
VERSION     XP_040943633.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087699.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="protein SODIUM POTASSIUM ROOT DEFECTIVE 3"
                     /calculated_mol_wt=21014
     Region          125..178
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(130..132,135)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     CDS             1..197
                     /gene="LOC107903148"
                     /coded_by="XM_041087699.1:143..736"
                     /db_xref="GeneID:107903148"
ORIGIN      
        1 mkgmnilcas qastaiclsi dqvsataggq npttaaakrf tktlpctahp ppinplpyhl
       61 lknhdkwcsn ntvsvsandf kkksslkamd iitrksissd ikdaaadagn nkilsikqdq
      121 hqvvvlkvsl hckgcegkvr khlskmkgvt sfnidfeakk vtivgevtpl qvlasvskvk
      181 saqfwtsdis aapttkn
//
LOCUS       XP_016687347             899 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687347
VERSION     XP_016687347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..899
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=100259
     Region          171..215
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          749..894
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..899
                     /gene="LOC107905256"
                     /coded_by="XM_016831858.2:316..3015"
                     /db_xref="GeneID:107905256"
ORIGIN      
        1 mepfghrrpk issfsddlnc thfqlsstrg nkqvqkqrkf pnltsdsvss isnnkdqdql
       61 mfelglrssk qssgipmkkl laremskeie srrrsssvia rlmgldglpp eqklaegagf
      121 ynrrssrrns keepefkdvf evskmersgc gysslgtvds klsdaevafi qqkfmeakrf
      181 stdeklrdse efddtlevln sntdlllkfl eqpdslfakh lhdlqgvpsq shcgrisvlk
      241 ssrtlnnddg qskhrskspq ghhlygkyaa snrpelpmfq ldeknvptil ptrivvlkpn
      301 lgksrnstrt asspcsshhf psegiehlei sgiesretek whkkkvqqdi gfsrhnsres
      361 remvkeitrq iknsfnngsm kistskfrgy agdesscdvs gsestndsdv tmsyrdkrhr
      421 rlssrssass vsreakkrls erwklthgsq evqmvsrgst lgemlaisdr etslansssp
      481 vvgegcseig dcsrpavwne plgissrdgw kdgclgnlsr srsvpasstd fgsprigtrh
      541 gslrrdkyvi pkavkgnfnp weaslvtsnq lsrgnksrfs ssssssiken sdtspdfvit
      601 phqssgesas tamdsssvle ntlevndpkk psdtelsapp slnadvssgd vcnlepkeps
      661 vselgsrags kegdqpspis vieapftddl ssgsecfesi sadlhglrmq lqllkletea
      721 yeegtmllss dddgdrvsiq lataeknles vyivdvlvds gingadldtf letwhspecp
      781 vnptvfeele kkyhnlnsws raerrlmfdr insklleiyq qyidqfpwik rpvrkiipkw
      841 nileledslh kslvsdnkkp dmdtevcews nlrddidvig keierllvde lvgevavwv
//
LOCUS       XP_016687348             839 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687348
VERSION     XP_016687348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831859.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..839
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=93396
     Region          111..155
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          689..834
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..839
                     /gene="LOC107905256"
                     /coded_by="XM_016831859.2:247..2766"
                     /db_xref="GeneID:107905256"
ORIGIN      
        1 mfelglrssk qssgipmkkl laremskeie srrrsssvia rlmgldglpp eqklaegagf
       61 ynrrssrrns keepefkdvf evskmersgc gysslgtvds klsdaevafi qqkfmeakrf
      121 stdeklrdse efddtlevln sntdlllkfl eqpdslfakh lhdlqgvpsq shcgrisvlk
      181 ssrtlnnddg qskhrskspq ghhlygkyaa snrpelpmfq ldeknvptil ptrivvlkpn
      241 lgksrnstrt asspcsshhf psegiehlei sgiesretek whkkkvqqdi gfsrhnsres
      301 remvkeitrq iknsfnngsm kistskfrgy agdesscdvs gsestndsdv tmsyrdkrhr
      361 rlssrssass vsreakkrls erwklthgsq evqmvsrgst lgemlaisdr etslansssp
      421 vvgegcseig dcsrpavwne plgissrdgw kdgclgnlsr srsvpasstd fgsprigtrh
      481 gslrrdkyvi pkavkgnfnp weaslvtsnq lsrgnksrfs ssssssiken sdtspdfvit
      541 phqssgesas tamdsssvle ntlevndpkk psdtelsapp slnadvssgd vcnlepkeps
      601 vselgsrags kegdqpspis vieapftddl ssgsecfesi sadlhglrmq lqllkletea
      661 yeegtmllss dddgdrvsiq lataeknles vyivdvlvds gingadldtf letwhspecp
      721 vnptvfeele kkyhnlnsws raerrlmfdr insklleiyq qyidqfpwik rpvrkiipkw
      781 nileledslh kslvsdnkkp dmdtevcews nlrddidvig keierllvde lvgevavwv
//
LOCUS       XP_016687346             518 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g42450,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016687346
VERSION     XP_016687346.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687346.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..518
                     /product="pentatricopeptide repeat-containing protein
                     At5g42450, mitochondrial"
                     /calculated_mol_wt=58350
     Region          <48..497
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          62..89
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          161..190
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          192..221
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          267..292
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          296..323
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          329..358
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          362..391
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..518
                     /gene="LOC107905255"
                     /coded_by="XM_016831857.2:28..1584"
                     /db_xref="GeneID:107905255"
ORIGIN      
        1 mfrlnpnyrf sraaaatifn neahnplfiv pkvantyfcf sstsfadack lfdemsdldv
       61 vsatsiigtf skqhlhkeai ylftrmlfnn irpteftfgt vihsstllkd lnigkqlhgc
      121 tiksglnsnv fvasasldly sklstieear kvfedthqpn vvsyttlisg yiknkrfeda
      181 lwlfeemper nvvtwnamis gfsqtgynee avnifiemlr ervmpnestf scviitaani
      241 gaigkgrslh gyvfkclgdk lnvfignali sfyakcgnme dsllvfdklr grnvvswnal
      301 vcgyaqngrg ieaielferm ivsglkpndv tilgmlwacs haglvtegys yfnkvrhkep
      361 nllkpehygc mvdmlarsgr fkeaeefiqr lpfepgigfw kallggcqih snvklgefaa
      421 rkimaldpvd vssyimlsna yaaagrweia stvrkeikek qmkripgcsw ieirnevhvf
      481 lnkdckhcqi ddiyrvlkic iqhsldceav silmefsi
//
LOCUS       XP_016687343             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687343
VERSION     XP_016687343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831854.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..220
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24960
     Region          14..>178
                     /region_name="DUF1635"
                     /note="Protein of unknown function (DUF1635); pfam07795"
                     /db_xref="CDD:400238"
     CDS             1..220
                     /gene="LOC107905253"
                     /coded_by="XM_016831854.2:949..1611"
                     /db_xref="GeneID:107905253"
ORIGIN      
        1 msplsndyka lfglkskqmy ynnevqsird evigeigihq eitnvlyqll fqachergea
       61 kqqlkqsmve isklkkllnk llpsskfsae tnssddvslt addcthrktl kaslvensgc
      121 ripvrkcysi gnvidalneg rplpvkgrlf eadidtppll etlmimghlp nwrnppplpf
      181 nlvvneisns qtlnykkssd vndgsfwrti yewcgfwfiy
//
LOCUS       XP_016687345             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABE1c [Gossypium hirsutum].
ACCESSION   XP_016687345
VERSION     XP_016687345.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831856.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687345.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="ras-related protein RABE1c"
                     /calculated_mol_wt=23584
     Region          13..180
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            13..17
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            22..29
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(24..30,40..43,46..47,73,128..129,131..132,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(30..42,44..46)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(40,45..53)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(43,45,49..56,63,65)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(48,50..52,67,69,76..77,80,84,86..89,177)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(48..49,51,69..70,77,79,81..83)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            48..52
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(73,75..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            76..81
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            84..88
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            116..125
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            175..180
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..215
                     /gene="LOC107905254"
                     /coded_by="XM_016831856.2:220..867"
                     /db_xref="GeneID:107905254"
ORIGIN      
        1 maapparara dydyliklll igdsgvgksc lllrfsdgsf ttsfittigi dfkirtield
       61 gkriklqiwd tagqerfrti ttayyrgamg illvydvtde ssfnnirnwi rnieqhasdn
      121 vnkilvgnka dmdeskravp tskgqalade ygikffetsa ktnlnveevf fsiardikqr
      181 ladtdsksep qtikinqgdq aaggaapaqk saccg
//
LOCUS       XP_016687342             138 aa            linear   PLN 06-AUG-2024
DEFINITION  probable histone H2B.3 [Gossypium hirsutum].
ACCESSION   XP_016687342
VERSION     XP_016687342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..138
                     /product="probable histone H2B.3"
                     /calculated_mol_wt=15148
     Region          49..136
                     /region_name="HFD_H2B"
                     /note="histone-fold domain found in histone H2B and
                     similar proteins; cd22910"
                     /db_xref="CDD:467035"
     Site            order(49,51,53..55,57..59,62..69,71..72,75..76,79..80,
                     82..84,86..88,92,102..103,105,108..109,112,115..117,120,
                     123..125,127..128,131..132,135..136)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467035"
     Site            order(52..54,56..57,60..62,67..69,73,109,113,122..123,
                     125..126,129..130,132..133,136)
                     /site_type="other"
                     /note="Hif1 binding site [polypeptide binding]"
                     /db_xref="CDD:467035"
     Site            order(75,78..79,81..82,85,90,93,96..98,106..107,110,
                     114..115)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467035"
     CDS             1..138
                     /gene="LOC107905251"
                     /coded_by="XM_016831853.2:163..579"
                     /db_xref="GeneID:107905251"
ORIGIN      
        1 mapkvgekkp aekkpaekap aekrpkaekk iskeggadkk kkkvkksvet ykiyifkvlk
       61 qvhpdigiss kamgimnsfi ndifeklaqe asrlarynkk ptitsreiqt avrlvlpgel
      121 akhavsegtk avtkftss
//
LOCUS       XP_016687340             154 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H2A [Gossypium hirsutum].
ACCESSION   XP_016687340
VERSION     XP_016687340.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831851.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..154
                     /product="histone H2A"
                     /calculated_mol_wt=16129
     Region          23..140
                     /region_name="PTZ00017"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:185399"
     CDS             1..154
                     /gene="LOC107905248"
                     /coded_by="XM_016831851.2:243..707"
                     /db_xref="GeneID:107905248"
ORIGIN      
        1 mdagskvkkg aggrkgggpk kkpvsrsvka glqfpvgrig rylkkgrysq rvgtgapvyl
       61 aavleylaae vlelagnaar dnkknriipr hvllavrnde elgkllagvt iahggvlpni
      121 npvllpkkne kaaakepksp skatkspkks pkka
//
LOCUS       XP_040943634             126 aa            linear   PLN 06-AUG-2024
DEFINITION  probable histone H2A.2 [Gossypium hirsutum].
ACCESSION   XP_040943634
VERSION     XP_040943634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087700.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..126
                     /product="probable histone H2A.2"
                     /calculated_mol_wt=13670
     Region          3..119
                     /region_name="PLN00157"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:177758"
     CDS             1..126
                     /gene="LOC121214049"
                     /coded_by="XM_041087700.1:906..1286"
                     /db_xref="GeneID:121214049"
ORIGIN      
        1 mdtvsrsvka glqfpvgrig rylkkgrysq rvgrtgapvy laavleylaa dvlhlagnaa
       61 rdnkknriip rhvllavrnd eelrkllagv tiahggvlan inpillpnkn ekpvakepkv
      121 tiqgyq
//
LOCUS       XP_016687341             151 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H2A [Gossypium hirsutum].
ACCESSION   XP_016687341
VERSION     XP_016687341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..151
                     /product="histone H2A"
                     /calculated_mol_wt=15905
     Region          23..140
                     /region_name="PLN00157"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:177758"
     CDS             1..151
                     /gene="LOC107905249"
                     /coded_by="XM_016831852.2:244..699"
                     /db_xref="GeneID:107905249"
ORIGIN      
        1 mdtgskvkkg aggrkgggpk kkpvsrsvka glqfpvgrig rylkkgrysq rvgtgapvyl
       61 aavleylaae vlelagnaar dnkknriipr hvllavrnde elgkllagvt iahggvlpni
      121 npvllpkkne kvatkepksp skatkkspkk a
//
LOCUS       XP_016687339             144 aa            linear   PLN 06-AUG-2024
DEFINITION  organelle RRM domain-containing protein 2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016687339
VERSION     XP_016687339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831850.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..144
                     /product="organelle RRM domain-containing protein 2,
                     mitochondrial"
                     /calculated_mol_wt=16232
     Region          34..116
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     CDS             1..144
                     /gene="LOC107905247"
                     /coded_by="XM_016831850.2:176..610"
                     /db_xref="GeneID:107905247"
ORIGIN      
        1 mafisrarra ftgpfppcsy lasirlsstl tspklfisgl srettdeqfq eafypfgriv
       61 eakvvrdrat rrskgfgfvt ytsieeaeka reemnakflh gwvifvdpak preyrppphr
      121 pesgpsetgf rtnktvgwcg ynst
//
LOCUS       XP_016687337             807 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687337
VERSION     XP_016687337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831848.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..807
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=89148
     Region          227..282
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          390..442
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          457..494
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(466..468,470,473,491)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          535..587
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(535,554..557,561,585)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <704..780
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
     CDS             1..807
                     /gene="LOC107905246"
                     /coded_by="XM_016831848.2:497..2920"
                     /db_xref="GeneID:107905246"
ORIGIN      
        1 meeeafclri steeitengn gtkpelkrdr eclelesepe aspnkkqake vsnedirsev
       61 snpivspken tssfhdissr nhagsgevts vcsrnssfde slsdssqmcd tsgamlsshv
      121 tleipkhlss sgirkitfkf skrkehydne tsysvggecm nmeniygtss vewssrysca
      181 pnlelkmskk vvpsnyptnv kkllgtgild garvkyisis tervldgiih aggylcgcsf
      241 cnfskvvsay efeqhagakt rhpnnhiyle ngkqiysiiq elktaplsll devikdvagt
      301 sineesfqdw kaslqqsngn vqaekiynmk ppslpnslsr pnsimkrkka adggmkkrdn
      361 dlhrllfmpn glpdgaelty fikgqklleg ykqgngivcc ccerelspsq feahagmaar
      421 rqpyrhiyts ngltlhdial slangqcvtt gssddtcavc gnagdlllrc ecsqafhpsc
      481 lnlehlpege wccpncadeh gssrkavsge asstarpivi rltrvvkspe feiggcvvcr
      541 ghdfsgstfd drtvilcdqc ekefhvgclr esglcdlkei pedkwfccdd cnrihvalqs
      601 yvssgvqiip tvfaniirrk ylekgllidg atdcvqwril sgksrysehl pllssaaaif
      661 recfdpivak sgrdlipvmv ygrnisgqef ggmycvvliv rslvvsagll rifgrevael
      721 pivatsrkhq gkgyfqalfa cienllssln venlvlpaad ealsiwtkkf gftkmseqql
      781 skyqkelqlt ifkgtlmlek kvepipe
//
LOCUS       XP_016687338             806 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687338
VERSION     XP_016687338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016831849.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..806
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=89061
     Region          227..282
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          389..441
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          456..493
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(465..467,469,472,490)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          534..586
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(534,553..556,560,584)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          <703..779
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
     CDS             1..806
                     /gene="LOC107905246"
                     /coded_by="XM_016831849.2:497..2917"
                     /db_xref="GeneID:107905246"
ORIGIN      
        1 meeeafclri steeitengn gtkpelkrdr eclelesepe aspnkkqake vsnedirsev
       61 snpivspken tssfhdissr nhagsgevts vcsrnssfde slsdssqmcd tsgamlsshv
      121 tleipkhlss sgirkitfkf skrkehydne tsysvggecm nmeniygtss vewssrysca
      181 pnlelkmskk vvpsnyptnv kkllgtgild garvkyisis tervldgiih aggylcgcsf
      241 cnfskvvsay efeqhagakt rhpnnhiyle ngkqiysiiq elktaplsll devikdvagt
      301 sineesfqdw kaslqqsngn vqaekiynmk ppslpnslrp nsimkrkkaa dggmkkrdnd
      361 lhrllfmpng lpdgaeltyf ikgqkllegy kqgngivccc cerelspsqf eahagmaarr
      421 qpyrhiytsn gltlhdials langqcvttg ssddtcavcg nagdlllrce csqafhpscl
      481 nlehlpegew ccpncadehg ssrkavsgea sstarpivir ltrvvkspef eiggcvvcrg
      541 hdfsgstfdd rtvilcdqce kefhvgclre sglcdlkeip edkwfccddc nrihvalqsy
      601 vssgvqiipt vfaniirrky lekgllidga tdcvqwrils gksrysehlp llssaaaifr
      661 ecfdpivaks grdlipvmvy grnisgqefg gmycvvlivr slvvsagllr ifgrevaelp
      721 ivatsrkhqg kgyfqalfac ienllsslnv enlvlpaade alsiwtkkfg ftkmseqqls
      781 kyqkelqlti fkgtlmlekk vepipe
//
LOCUS       XP_040943636             167 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-depolymerizing factor 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943636
VERSION     XP_040943636.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087702.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="actin-depolymerizing factor 1 isoform X1"
                     /calculated_mol_wt=19222
     Region          34..166
                     /region_name="ADF_cofilin_like"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; cd11286"
                     /db_xref="CDD:200442"
     Site            34..35
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(110,112,126,153,156)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..167
                     /gene="LOC107957988"
                     /coded_by="XM_041087702.1:16..519"
                     /db_xref="GeneID:107957988"
ORIGIN      
        1 mlclsaidvi khwgcfgylf shlmilysqa naasgmavhd dcklkflelk tkrthrfivf
       61 kieekqkqvi veklgeptes yedftkclpa decryavydf dfltaenvpk sriffiawsp
      121 dtsrirskmi yasskdrfkr eldgiqvelq atdptemgld vfksran
//
LOCUS       XP_016749115             139 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-depolymerizing factor 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016749115
VERSION     XP_016749115.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893626.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016749115.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="actin-depolymerizing factor 2 isoform X2"
                     /calculated_mol_wt=15981
     Region          6..138
                     /region_name="ADF_cofilin_like"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; cd11286"
                     /db_xref="CDD:200442"
     Site            6..7
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(82,84,98,125,128)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..139
                     /gene="LOC107957988"
                     /coded_by="XM_016893626.2:160..579"
                     /db_xref="GeneID:107957988"
ORIGIN      
        1 manaasgmav hddcklkfle lktkrthrfi vfkieekqkq viveklgept esyedftkcl
       61 padecryavy dfdfltaenv pksriffiaw spdtsrirsk miyasskdrf kreldgiqve
      121 lqatdptemg ldvfksran
//
LOCUS       XP_040943637             139 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-depolymerizing factor 2 [Gossypium hirsutum].
ACCESSION   XP_040943637
VERSION     XP_040943637.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087703.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..139
                     /product="actin-depolymerizing factor 2"
                     /calculated_mol_wt=15966
     Region          6..138
                     /region_name="ADF_cofilin_like"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; cd11286"
                     /db_xref="CDD:200442"
     Site            6..7
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(82,84,98,125,128)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..139
                     /gene="LOC107957987"
                     /coded_by="XM_041087703.1:252..671"
                     /db_xref="GeneID:107957987"
ORIGIN      
        1 manaasgmav hddcklkfqe lkakrthrfi vfkieekqkq viveklgept esyedftkcl
       61 padecryavy dfdfltaenv pksriffiaw spdtsrirsk miyasskdrf kreldgiqve
      121 lqatdptemg ldvfksran
//
LOCUS       XP_040943639            1470 aa            linear   PLN 06-AUG-2024
DEFINITION  putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943639
VERSION     XP_040943639.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087705.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1470
                     /product="putative E3 ubiquitin-protein ligase LIN-1
                     isoform X1"
                     /calculated_mol_wt=163798
     Region          504..556
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(505,508,510..513,532,536,545)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          <1201..1470
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1234..1271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1276..1310
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1315..1347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1358..1394
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1400..1436
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1443..1467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1470
                     /gene="LOC121214050"
                     /coded_by="XM_041087705.1:159..4571"
                     /db_xref="GeneID:121214050"
ORIGIN      
        1 magnyrfamd qkdlvrtlit tvgsfiqdrl idkeqrvqhk eqcaerlaae dgssgndvev
       61 rysdqavlan ldwgiealee aintsnietk harldyaekm lqvcamlvsn qktagvpnsy
      121 lsawaylnls ylwklrndvr nsviyviemf ivepffsrid fapelwknlf lphmssiagw
      181 yaearhklim evvpdsndis ftadldqffn eslvfsmrpd qiekmkkleq lysesldent
      241 rlfakyykdc mnsdsgsgvn kkvmapmlpi aeppmtplhe vsrsipdyvk fgpilpksag
      301 fspvlkskhg grevnsrvnl nssvfshsid dsaawdpqdg vpeeneddsd yeaigstvqq
      361 pvkltnqtps psvfspvdsp rtsssknssp rsdvtskres ksllrllscr iadtsdvisl
      421 pisprkstdh sissvdsdge aivghdsert kscrkirgrp sstsndhvni rslehsyqne
      481 sdegshscis lplsekltsq srppkdfvcp itgqifndpv tletgqtyer kaieewlnrg
      541 sttcpitrqp lssntlpktn yvlkrlitsw keqhpdlaqe fsysetprtr fnsplgkeiv
      601 lvspsnrtse lsnkglddyv nqrgkrftra avatsptsvi sqatvetiin glkpvvsclc
      661 tsnnlqeces avleiaklwk dskgdaaihs ylskltivng fmeilsssfd revlrasiyi
      721 lselifgden igetltsvds dfdclaallk nglaeaavli yqlqptfaql scydlvpsli
      781 qiilrktees ddlplmikpk daaiaileqi lmngdensrs lnalsivsgn aipslvkcmh
      841 rvdsrrsiis illccmkvdk sckylivtgt elsyvlelfh asndtirgic ieflselvql
      901 nrrtlcnqil emiktegafs tmhtflvylq mapmehqpai atlllqldll veprkmsiyr
      961 eeaiealies lrkkefpnqq mkvldallsl pgritssges yieawllkia gfdqpyngtp
     1021 dwtetmesee kaictwekrv afvlcnhekg cifkaleecf ksnslkmaks clvittwliy
     1081 mlsilpdtgv rdaareslld efinvlqssk nleekilavl alkafindpt aieelgkyan
     1141 ciyktlrklk rnsfmatdil kalmnlssvn atelwsytdi getdsrsnge vlcmsyhkgc
     1201 lisshsdgti kvweagkrgl rlvqeahehi kgvtclyvps sgdrlysgsl dktirvwalk
     1261 peeiqcmqvh dvkeavyelt anakfacfvs qgngvkvynw agipkhinfn knvrclamsg
     1321 dkiycgcsgy niqeldlsss tlstfhlgtr kllgkqtvns lnihddllya ggstvdgvsg
     1381 kvfcrsskkv mgtfptgfdi qriavnndfi ftatklgmie vwlkerisrv gaikmnskgh
     1441 akvtslvsdm dggmlfaass dgkiqawald
//
LOCUS       XP_040943640            1469 aa            linear   PLN 06-AUG-2024
DEFINITION  putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943640
VERSION     XP_040943640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087706.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1469
                     /product="putative E3 ubiquitin-protein ligase LIN-1
                     isoform X2"
                     /calculated_mol_wt=163711
     Region          503..555
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(504,507,509..512,531,535,544)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          <1200..1469
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1233..1270
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1275..1309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1314..1346
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1357..1393
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1399..1435
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1442..1466
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1469
                     /gene="LOC121214050"
                     /coded_by="XM_041087706.1:159..4568"
                     /db_xref="GeneID:121214050"
ORIGIN      
        1 magnyrfamd qkdlvrtlit tvgsfiqdrl idkeqrvqhk eqcaerlaae dgssgndvev
       61 rysdqavlan ldwgiealee aintsnietk harldyaekm lqvcamlvsn qktagvpnsy
      121 lsawaylnls ylwklrndvr nsviyviemf ivepffsrid fapelwknlf lphmssiagw
      181 yaearhklim evvpdsndis ftadldqffn eslvfsmrpd qiekmkkleq lysesldent
      241 rlfakyykdc mnsdsgsgvn kkvmapmlpi aeppmtplhe vsrsipdyvk fgpilpksag
      301 fspvlkskhg grevnrvnln ssvfshsidd saawdpqdgv peeneddsdy eaigstvqqp
      361 vkltnqtpsp svfspvdspr tsssknsspr sdvtskresk sllrllscri adtsdvislp
      421 isprkstdhs issvdsdgea ivghdsertk scrkirgrps stsndhvnir slehsyqnes
      481 degshscisl plsekltsqs rppkdfvcpi tgqifndpvt letgqtyerk aieewlnrgs
      541 ttcpitrqpl ssntlpktny vlkrlitswk eqhpdlaqef sysetprtrf nsplgkeivl
      601 vspsnrtsel snkglddyvn qrgkrftraa vatsptsvis qatvetiing lkpvvsclct
      661 snnlqecesa vleiaklwkd skgdaaihsy lskltivngf meilsssfdr evlrasiyil
      721 selifgdeni getltsvdsd fdclaallkn glaeaavliy qlqptfaqls cydlvpsliq
      781 iilrkteesd dlplmikpkd aaiaileqil mngdensrsl nalsivsgna ipslvkcmhr
      841 vdsrrsiisi llccmkvdks ckylivtgte lsyvlelfha sndtirgici eflselvqln
      901 rrtlcnqile miktegafst mhtflvylqm apmehqpaia tlllqldllv eprkmsiyre
      961 eaiealiesl rkkefpnqqm kvldallslp gritssgesy ieawllkiag fdqpyngtpd
     1021 wtetmeseek aictwekrva fvlcnhekgc ifkaleecfk snslkmaksc lvittwliym
     1081 lsilpdtgvr daaresllde finvlqsskn leekilavla lkafindpta ieelgkyanc
     1141 iyktlrklkr nsfmatdilk almnlssvna telwsytdig etdsrsngev lcmsyhkgcl
     1201 isshsdgtik vweagkrglr lvqeahehik gvtclyvpss gdrlysgsld ktirvwalkp
     1261 eeiqcmqvhd vkeavyelta nakfacfvsq gngvkvynwa gipkhinfnk nvrclamsgd
     1321 kiycgcsgyn iqeldlssst lstfhlgtrk llgkqtvnsl nihddllyag gstvdgvsgk
     1381 vfcrsskkvm gtfptgfdiq riavnndfif tatklgmiev wlkerisrvg aikmnskgha
     1441 kvtslvsdmd ggmlfaassd gkiqawald
//
LOCUS       XP_040943641             884 aa            linear   PLN 06-AUG-2024
DEFINITION  cation/H(+) antiporter 20 [Gossypium hirsutum].
ACCESSION   XP_040943641
VERSION     XP_040943641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087707.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..884
                     /product="cation/H(+) antiporter 20"
                     /calculated_mol_wt=96845
     Region          68..870
                     /region_name="PLN03159"
                     /note="cation/H(+) antiporter 15; Provisional"
                     /db_xref="CDD:215608"
     CDS             1..884
                     /gene="LOC121214052"
                     /coded_by="XM_041087707.1:20..2674"
                     /db_xref="GeneID:121214052"
ORIGIN      
        1 mppyhattfl caykfplsss hvplifsnlf kkknhlpffl ldeqirpnle lvfiqnkmgf
       61 nitsiktssn gawqgdnpln fafpllivqt tlilvlsrfl afllkplrqp kviaeivggi
      121 llgpsafgrn edymhrifps wsmpvletva sigllfflfl vgleldltsi rrsgrkafgi
      181 afcgislpfi cgfgvafilr ktvdgadkvg ygqfivfmgv alsitafpvl arilaelkll
      241 ttqvgeiama saafndvaaw illalavaia gngsgqqksp lisiwillsg mafvifmmvl
      301 irpamkwvah rcsperdiid eayicltlgg vmvsgfitdl igihaifgaf ifgltipkeg
      361 dfaeklieri edfvtglllp lyfassglkt dvakikggea wgllalvvtt acagkiigtf
      421 avalmfgmai reslalgilm ntkglveliv lnigkekkvl ndeifailvl malfttfitt
      481 pavmaiykpa rgssvlthrk lrdltntdes kdqlrvlacl hgisnvpsii sliestrstk
      541 ksqlklfimh lveltersss iimvhrarkn glpfinrlrr gdwqdritga fqaysqlgrv
      601 svrpstaisa lstihedich vaetkrvtmi ilpfhkqwrg qgdlqvidnv ghgwrlvnqr
      661 vlknapcsva ilvdcgldng aqrvcilffg gpddrealel sgriaehpav kvsvvrfiek
      721 dglqshgvvl kpsaskcaek yysfstahin tekekeldda vveefrskwd gmveyiekts
      781 sniveevlgl gqsgdydliv vgkgrfpsrm vakladrqae haelgpigdl lassshrvts
      841 svlviqqhdt vhaeempvak veqnehdmvk gdgdagtgei skvv
//
LOCUS       XP_016749119             469 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD7 [Gossypium
            hirsutum].
ACCESSION   XP_016749119
VERSION     XP_016749119.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016749119.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD7"
                     /calculated_mol_wt=50985
     Region          3..117
                     /region_name="ArfGap_ArfGap1"
                     /note="Arf1 GTPase-activating protein 1; cd08830"
                     /db_xref="CDD:350059"
     Site            order(19,22,39,42,47)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350059"
     Site            order(19,22,39,42)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350059"
     CDS             1..469
                     /gene="LOC107957991"
                     /coded_by="XM_016893630.2:202..1611"
                     /db_xref="GeneID:107957991"
ORIGIN      
        1 maasrrlrdl qsqpgnktcv dcnqknpqwa svsygifmcl ecsgkhrglg vhisfvrsvt
       61 mdswseiqik kmesggnerl naflaqygip ketdivakyn tnaasvyrdr iqalaegrpw
      121 rdppvvkenl ngggsggirk pplssggggd rrsnfagdng gwdswdndds frsssdikrn
      181 qsasdfrggs yhnggrtgga pvrskstedm ytrsqlessa ankesffark maenesrpeg
      241 lppsqggkyv gfgstpmptq rinnssqgdv fsvvsqgigr lslvaasaan vvqagtkeft
      301 skvkeggyda rvnetvgvvt aktseigqkt wgmmkgvmai asqkveeytk dgmnwkndgn
      361 wqrndsekng yyqefkqenk gwnstsggqt ssgvnynsyn snswddwdtk dnrkehttkv
      421 tashsndgwa gwddpkddgy dsfyngasdk navgrngksd aawtgggfl
//
LOCUS       XP_016749118             469 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD7 [Gossypium
            hirsutum].
ACCESSION   XP_016749118
VERSION     XP_016749118.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893629.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016749118.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..469
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD7"
                     /calculated_mol_wt=50985
     Region          3..117
                     /region_name="ArfGap_ArfGap1"
                     /note="Arf1 GTPase-activating protein 1; cd08830"
                     /db_xref="CDD:350059"
     Site            order(19,22,39,42,47)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350059"
     Site            order(19,22,39,42)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350059"
     CDS             1..469
                     /gene="LOC107957991"
                     /coded_by="XM_016893629.2:316..1725"
                     /db_xref="GeneID:107957991"
ORIGIN      
        1 maasrrlrdl qsqpgnktcv dcnqknpqwa svsygifmcl ecsgkhrglg vhisfvrsvt
       61 mdswseiqik kmesggnerl naflaqygip ketdivakyn tnaasvyrdr iqalaegrpw
      121 rdppvvkenl ngggsggirk pplssggggd rrsnfagdng gwdswdndds frsssdikrn
      181 qsasdfrggs yhnggrtgga pvrskstedm ytrsqlessa ankesffark maenesrpeg
      241 lppsqggkyv gfgstpmptq rinnssqgdv fsvvsqgigr lslvaasaan vvqagtkeft
      301 skvkeggyda rvnetvgvvt aktseigqkt wgmmkgvmai asqkveeytk dgmnwkndgn
      361 wqrndsekng yyqefkqenk gwnstsggqt ssgvnynsyn snswddwdtk dnrkehttkv
      421 tashsndgwa gwddpkddgy dsfyngasdk navgrngksd aawtgggfl
//
LOCUS       XP_040943642             103 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H4 [Gossypium hirsutum].
ACCESSION   XP_040943642
VERSION     XP_040943642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087708.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..103
                     /product="histone H4"
                     /calculated_mol_wt=11278
     Region          1..103
                     /region_name="PLN00035"
                     /note="histone H4; Provisional"
                     /db_xref="CDD:177669"
     CDS             1..103
                     /gene="LOC121214053"
                     /coded_by="XM_041087708.1:352..663"
                     /db_xref="GeneID:121214053"
ORIGIN      
        1 msgrgkggkg lgkggakrhr kvlrdniqgi tkpairrlar rggvkrisgl iyeetrgvlk
       61 iflenvirda vtyteharrk tvtamdvvya lkrqgrtlyg fgg
//
LOCUS       XP_040943643             123 aa            linear   PLN 06-AUG-2024
DEFINITION  organelle RRM domain-containing protein 2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040943643
VERSION     XP_040943643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087709.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..123
                     /product="organelle RRM domain-containing protein 2,
                     mitochondrial"
                     /calculated_mol_wt=13457
     Region          38..121
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     CDS             1..123
                     /gene="LOC121214054"
                     /coded_by="XM_041087709.1:117..488"
                     /db_xref="GeneID:121214054"
ORIGIN      
        1 mawrsgnlrr flsttsslfd rplsaakaar vteqippstt lfvsglsgrt tnqklreafa
       61 nfgdviqakv vtdrsslssh skgygfvrys nledaekgme gmdgqfldgr vifteyakpk
      121 dtl
//
LOCUS       XP_040943645             301 aa            linear   PLN 06-AUG-2024
DEFINITION  probable proteasome inhibitor isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943645
VERSION     XP_040943645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087711.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..301
                     /product="probable proteasome inhibitor isoform X1"
                     /calculated_mol_wt=31585
     Region          14..151
                     /region_name="PI31_Prot_N"
                     /note="PI31 proteasome regulator N-terminal; pfam11566"
                     /db_xref="CDD:463296"
     Region          203..265
                     /region_name="PI31_Prot_C"
                     /note="PI31 proteasome regulator; pfam08577"
                     /db_xref="CDD:430086"
     CDS             1..301
                     /gene="LOC121214055"
                     /coded_by="XM_041087711.1:186..1091"
                     /db_xref="GeneID:121214055"
ORIGIN      
        1 msnersvmav iraarpsfrn dtdkiafavh aaflssgfvl tavgpnalae nvisspstde
       61 vgidnwnqfe dhyafvyanp ekgsnkvlvk cllmngkllv dalahgssqp vhleidinny
      121 vgengngnys aqyknldklv snldkevisk lygpvstsgs ssnpsgletg srrnvngdgv
      181 rineptgpqp hpsgvvippv npvggsdlfp gpgagmyptr gdfgggdmll gpndprwfgg
      241 lsgdhgfpga qpgvppgarf dpygppgvpg fepnrfirns prrpgggthp dlehfgggdf
      301 i
//
LOCUS       XP_040943646             275 aa            linear   PLN 06-AUG-2024
DEFINITION  probable proteasome inhibitor isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943646
VERSION     XP_040943646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087712.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..275
                     /product="probable proteasome inhibitor isoform X2"
                     /calculated_mol_wt=29008
     Region          14..151
                     /region_name="PI31_Prot_N"
                     /note="PI31 proteasome regulator N-terminal; pfam11566"
                     /db_xref="CDD:463296"
     Region          <186..239
                     /region_name="PI31_Prot_C"
                     /note="PI31 proteasome regulator; pfam08577"
                     /db_xref="CDD:430086"
     CDS             1..275
                     /gene="LOC121214055"
                     /coded_by="XM_041087712.1:180..1007"
                     /db_xref="GeneID:121214055"
ORIGIN      
        1 msnersvmav iraarpsfrn dtdkiafavh aaflssgfvl tavgpnalae nvisspstde
       61 vgidnwnqfe dhyafvyanp ekgsnkvlvk cllmngkllv dalahgssqp vhleidinny
      121 vgengngnys aqyknldklv snldkevisk lygpvstsgs ssnpsgletg srrnvngdgv
      181 rineptgpqp hpsggdfggg dmllgpndpr wfgglsgdhg fpgaqpgvpp garfdpygpp
      241 gvpgfepnrf irnsprrpgg gthpdlehfg ggdfi
//
LOCUS       XP_040943647             535 aa            linear   PLN 06-AUG-2024
DEFINITION  aldehyde oxidase GLOX [Gossypium hirsutum].
ACCESSION   XP_040943647
VERSION     XP_040943647.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087713.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..535
                     /product="aldehyde oxidase GLOX"
                     /calculated_mol_wt=59098
     Region          40..280
                     /region_name="Glyoxal_oxid_N"
                     /note="Glyoxal oxidase N-terminus; pfam07250"
                     /db_xref="CDD:399910"
     Region          429..533
                     /region_name="E_set_GO_C"
                     /note="C-terminal Early set domain associated with the
                     catalytic domain of galactose oxidase; cd02851"
                     /db_xref="CDD:199882"
     CDS             1..535
                     /gene="LOC121214056"
                     /coded_by="XM_041087713.1:36..1643"
                     /db_xref="GeneID:121214056"
ORIGIN      
        1 metsfsshpw llifitlstv haqlpgswel lvsnagvasm htavtrfntv vlldrtnigp
       61 srkmlpkghc rydrhddvlk kdcyahsvvf glqtneirpl miltdtwcss gqflpdgtll
      121 qtggdldgfk kirkfepcep drfcdwvelk dvelingrwy atnqilpdgt viivggrgtn
      181 tveyypprkt qngavelkfl aevednqmdn lypyvhllpn shlfifannk avmydhednk
      241 viqeypellg gprnypsags svmlaldgdf ktavilicgg aeygafiers tdtpahgscg
      301 riiatdqnpv wemedmpfgr vmgdmvmlpt gdvliingaq sgtqgfemgs npclnpvlyr
      361 pdqpiglrfm tlnpgtvprm yhstanllpd grvllagsnp hylynfaaef ptelrleafs
      421 peylsldran irpiiegipe tlrygeafdv fvtvplpvvg vvevnfgnap fathsfsqgq
      481 rlvkltvtps vpvdgryrik ctappngava ppgyymafav nqgvpsvarw vhlvp
//
LOCUS       XP_016729842             550 aa            linear   PLN 06-AUG-2024
DEFINITION  BEL1-like homeodomain protein 9 [Gossypium hirsutum].
ACCESSION   XP_016729842
VERSION     XP_016729842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874353.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..550
                     /product="BEL1-like homeodomain protein 9"
                     /calculated_mol_wt=60034
     Region          182..311
                     /region_name="POX"
                     /note="Associated with HOX; cl02677"
                     /db_xref="CDD:445883"
     Site            order(357..361,363,383,389,402,404..405,408..409,411..413,
                     415..416)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(359,362,405,408..409,412)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          375..413
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..550
                     /gene="LOC107940891"
                     /coded_by="XM_016874353.2:498..2150"
                     /db_xref="GeneID:107940891"
ORIGIN      
        1 maegfepyhv pqqsrrdklr imaqnepttg vslsgcsgll pfydppflss dlltcaaaaa
       61 gsheyhhppp sgtkdgvnft gfvggifnss psldhlnsss ihdmnnnnnn qflytpqnls
      121 ydtnngggga gevvvykpep lslslsshyt hqnssiytdm vpaifsgadg stsnsvplgp
      181 ftgyasilkg srflrpaqql leelcdvgkg iytekaslme lpplqnshtn pldggdsggs
      241 ggggdgqrkk stlisildev ykrykqyyqq mqsvvasfec vaglgnaapf anlamkamsk
      301 hfrylknait eqlqftnkah aqispgkneg prfgngdgsf ynravqnsrf lqnqpvwrpq
      361 rglperavtv lrawlfehfl hpyptdtdkl mlakqtglsr nqvsnwfina rvrlwkpmve
      421 eihmletrqk dernanksgd enpststqrv eentpskrtr nelpnvpvgn eqpnmstsyn
      481 gfsthphgsn vsltlglhqn nsiglsesfp inaaqhfglg levnsegyvi ggrhfgrgvv
      541 ggqllhdfvg
//
LOCUS       XP_016729855             109 aa            linear   PLN 06-AUG-2024
DEFINITION  dynein light chain 1, cytoplasmic [Gossypium hirsutum].
ACCESSION   XP_016729855
VERSION     XP_016729855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="dynein light chain 1, cytoplasmic"
                     /calculated_mol_wt=12387
     Region          5..89
                     /region_name="Dynein_light"
                     /note="Dynein light chain type 1; pfam01221"
                     /db_xref="CDD:460119"
     CDS             1..109
                     /gene="LOC107940901"
                     /coded_by="XM_016874366.2:92..421"
                     /db_xref="GeneID:107940901"
ORIGIN      
        1 mlegkavvre sdmpmemqsr vmelayqald lhevsdcqsi aryikqkfde aygtswhcvv
       61 gkdfgccish lcgtfiffhv eimeflifkd gkdlnetkee aigvmqknp
//
LOCUS       XP_040943648             569 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 2.8 [Gossypium hirsutum].
ACCESSION   XP_040943648
VERSION     XP_040943648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087714.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..569
                     /product="protein NRT1/ PTR FAMILY 2.8"
                     /calculated_mol_wt=62947
     Region          29..547
                     /region_name="MFS_NPF1_2"
                     /note="NRT1/PTR family (NPF), subfamily 1 and 2 of the
                     Major Facilitator Superfamily of transporters; cd17416"
                     /db_xref="CDD:340974"
     Site            order(38..39,42..43,46,79,152..153,155..157,160,186,
                     189..190,193,328,331..332,335..337,340,372,376,453..454,
                     458,462,478,481..482,485..486,489)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340974"
     CDS             1..569
                     /gene="LOC107940900"
                     /coded_by="XM_041087714.1:103..1812"
                     /db_xref="GeneID:107940900"
ORIGIN      
        1 maegsnsfld dpclspsskk qpggwravky ilanetfekl asmslianmt vylktkynme
       61 gvllvnvini wsgtssfmsi ggalisdmfl grylmllygs issllgmmil tltaivpklr
      121 pptcigqinc idpnlwqlsi lyagltlmai gaggirpcni afgadqfntt tkegrsqles
      181 ffnwwyfsft falvialtav vyiqtniswv igfaiptscl lvsivifvig hhayiimkpq
      241 gsvfvdlvkv itaatrkhrl dcsrcsfydp dfhprtkqlr clekaavian qneldedgkp
      301 kngwrlcsiq qvenlklllg mmpvclagig cfmtmdqqtt igilqaiqsn nvlpsgfkip
      361 pgwmglspmi alsiwistye ilwvlqtkrl tgkakrltmt qriniglisa macsivasfi
      421 ekkrrtaalk hgsfkspmsi lmllpqfals glveafaava imeylttqlp esmrtvagai
      481 ffislsmasy lnsmlvnivh kttkkggkts wlgghnlnng klenfyylaa siealnflyf
      541 nlyarrfiat sctinkeske dqhinedqi
//
LOCUS       XP_016729860             421 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETICULATA, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016729860
VERSION     XP_016729860.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874371.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729860.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="protein RETICULATA, chloroplastic"
                     /calculated_mol_wt=45352
     Region          197..375
                     /region_name="RETICULATA-like"
                     /note="Protein RETICULATA-related; pfam11891"
                     /db_xref="CDD:432167"
     CDS             1..421
                     /gene="LOC107940906"
                     /coded_by="XM_016874371.2:178..1443"
                     /db_xref="GeneID:107940906"
ORIGIN      
        1 mssfglshlv nvkndvvlrn lwsqdlsffk ngdkrfvfsm krrqrvvils lahrpeaeae
       61 aeaqagaats ivtkgssess irkeevrifg eakidagngg gsfygnggsg gggggdggcd
      121 ggdgekgdpe eeefgplmkf edvmketnar gatlpsdmme aaktvgirkl lllryldlqg
      181 sswplgfamr swgmlrnrml adpsflfkig teividscca tfaevqkrgk dfwaefelyv
      241 adllvgvvvn ialvgmlapy arigqpsisk gflggiqnay nalpssvfea erpgcrftvn
      301 qrlgtyfykg vlygtvgfac giigqgianl imtakrsmkk seedipvppl iksaalwgvf
      361 lavssntryq iinglerlve asplakqvpp vamaftvgvr fanniyggmq fvdwarlsgv
      421 q
//
LOCUS       XP_040943650             421 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETICULATA, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943650
VERSION     XP_040943650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087716.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="protein RETICULATA, chloroplastic"
                     /calculated_mol_wt=45352
     Region          197..375
                     /region_name="RETICULATA-like"
                     /note="Protein RETICULATA-related; pfam11891"
                     /db_xref="CDD:432167"
     CDS             1..421
                     /gene="LOC107940906"
                     /coded_by="XM_041087716.1:193..1458"
                     /db_xref="GeneID:107940906"
ORIGIN      
        1 mssfglshlv nvkndvvlrn lwsqdlsffk ngdkrfvfsm krrqrvvils lahrpeaeae
       61 aeaqagaats ivtkgssess irkeevrifg eakidagngg gsfygnggsg gggggdggcd
      121 ggdgekgdpe eeefgplmkf edvmketnar gatlpsdmme aaktvgirkl lllryldlqg
      181 sswplgfamr swgmlrnrml adpsflfkig teividscca tfaevqkrgk dfwaefelyv
      241 adllvgvvvn ialvgmlapy arigqpsisk gflggiqnay nalpssvfea erpgcrftvn
      301 qrlgtyfykg vlygtvgfac giigqgianl imtakrsmkk seedipvppl iksaalwgvf
      361 lavssntryq iinglerlve asplakqvpp vamaftvgvr fanniyggmq fvdwarlsgv
      421 q
//
LOCUS       XP_040943651             421 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETICULATA, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040943651
VERSION     XP_040943651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087717.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..421
                     /product="protein RETICULATA, chloroplastic"
                     /calculated_mol_wt=45352
     Region          197..375
                     /region_name="RETICULATA-like"
                     /note="Protein RETICULATA-related; pfam11891"
                     /db_xref="CDD:432167"
     CDS             1..421
                     /gene="LOC107940906"
                     /coded_by="XM_041087717.1:174..1439"
                     /db_xref="GeneID:107940906"
ORIGIN      
        1 mssfglshlv nvkndvvlrn lwsqdlsffk ngdkrfvfsm krrqrvvils lahrpeaeae
       61 aeaqagaats ivtkgssess irkeevrifg eakidagngg gsfygnggsg gggggdggcd
      121 ggdgekgdpe eeefgplmkf edvmketnar gatlpsdmme aaktvgirkl lllryldlqg
      181 sswplgfamr swgmlrnrml adpsflfkig teividscca tfaevqkrgk dfwaefelyv
      241 adllvgvvvn ialvgmlapy arigqpsisk gflggiqnay nalpssvfea erpgcrftvn
      301 qrlgtyfykg vlygtvgfac giigqgianl imtakrsmkk seedipvppl iksaalwgvf
      361 lavssntryq iinglerlve asplakqvpp vamaftvgvr fanniyggmq fvdwarlsgv
      421 q
//
LOCUS       XP_016729849             725 aa            linear   PLN 06-AUG-2024
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016729849
VERSION     XP_016729849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..725
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X1"
                     /calculated_mol_wt=78434
     Region          1..722
                     /region_name="PLN02418"
                     /note="delta-1-pyrroline-5-carboxylate synthase"
                     /db_xref="CDD:215230"
     CDS             1..725
                     /gene="LOC107940896"
                     /coded_by="XM_016874360.2:134..2311"
                     /db_xref="GeneID:107940896"
ORIGIN      
        1 mdpsrafvtn vkrlivkvgt avvtrgdgrl avgrlgalce qlkelnsqgy eivlvtsgav
       61 giglqrlryr klvnsslael qnaqfeldgk acaavgqssl malydtlfsq ldvtssqylv
      121 tdtefrdtsf rkqlsetvks llslkvipif nendavstrr apyedssgiy wdndslagll
      181 amelkadllv mlsdveglys gppsdpnskl ihtyikekhq ceitfgdksr lgrggmtakv
      241 naavcaayag ipsvitsgya tdsiikvlqg kcvgtlfhrd ahlwtlvkel gvremavtar
      301 kcsrqlqamn sedrrkilld iadaleanes likieneadv taaqndgyek slisrlslkp
      361 gkisslaksi rvladmedpi aqvlkrtela dglilektss plgvllvife srpdalvqia
      421 slairsgngl llkggkeakr snailhkvit saipenigek liglvtsred ipdllklddv
      481 idlviprgsn klitqiknst kipvlghadg ichvyvdksa kvdmakqivr dakidypaac
      541 namvysvpig sqetlllhkd lssngllnel vsdlqhegvt vyggprassl lnipethsfh
      601 heyssmacti eivddvqaai nhihqhgssh tdciitenhe vaetflhgvd saavfhnast
      661 rfcdgarfgl gaevgistsr ihargpvgve glltnrwilr gsgqvvngdk gviythkdlp
      721 lqtpl
//
LOCUS       XP_016729850             716 aa            linear   PLN 06-AUG-2024
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016729850
VERSION     XP_016729850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..716
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X2"
                     /calculated_mol_wt=77503
     Region          1..713
                     /region_name="PLN02418"
                     /note="delta-1-pyrroline-5-carboxylate synthase"
                     /db_xref="CDD:215230"
     CDS             1..716
                     /gene="LOC107940896"
                     /coded_by="XM_016874361.2:134..2284"
                     /db_xref="GeneID:107940896"
ORIGIN      
        1 mdpsrafvtn vkrlivkvgt avvtrgdgrl avgrlgalce qlkelnsqgy eivlvtsgav
       61 giglqrlryr klvnsslael qnaqfeldgk acaavgqssl malydtlfsq ldvtssqylv
      121 tdtefrdtsf rkqlsetvks llslkvipif nendavstrr apyedssgiy wdndslagll
      181 amelkadllv mlsdveglys gppsdpnskl ihtyikekhq ceitfgdksr lgrggmtakv
      241 naavcaayag ipsvitsgya tdsiikvlqg kcvgtlfhrd ahlwtlvkel gvremavtar
      301 kcsrqlqamn sedrrkilld iadaleanes likieneadv taaqndgyek slisrlslkp
      361 gkisslaksi rvladmedpi aqvlkrtela dglilektss plgvllvife srpdalvqia
      421 slairsgngl llkggkeakr snailhkvit saipenigek liglvtsred ipdllklddv
      481 idlviprgsn klitqiknst kipvlghadg ichvyvdksa kvdmakqivr dakidypaac
      541 nametlllhk dlssngllne lvsdlqhegv tvyggprass llnipethsf hheyssmact
      601 ieivddvqaa inhihqhgss htdciitenh evaetflhgv dsaavfhnas trfcdgarfg
      661 lgaevgists rihargpvgv eglltnrwil rgsgqvvngd kgviythkdl plqtpl
//
LOCUS       XP_016729846             537 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor EMB1444 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016729846
VERSION     XP_016729846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..537
                     /product="transcription factor EMB1444 isoform X1"
                     /calculated_mol_wt=61262
     Region          6..170
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     Region          354..411
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(359..360,362,367,384..385)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(365..366,369..370,372..373,377,385..386,389..390,
                     393,395..396,399..400)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..537
                     /gene="LOC107940895"
                     /coded_by="XM_016874357.2:309..1922"
                     /db_xref="GeneID:107940895"
ORIGIN      
        1 maatglrqll ksfctnspwk yavlwklghq spmsltwede ycvypipses mesissdvys
       61 nseiipsqfe tsmdlvvahm shlkytlgkg vvgkvahtgk hywvsyddnf tskanwtmvd
      121 ecpeewlfqf algiktivli pvlphgvvql aslemvaeds sitayikdrf kcnsihtelp
      181 sspissfpen leessttasm nplnsedpnt vdtvnhytfh vpgtylyeil diecenrinv
      241 nnasffsfpk gcelhkallg ppfrrqsnef lwenedlfsg lkpgsmlaeg sepdylleav
      301 vghvyegsfh mpnrsntqlp tssqpqtves dyygetqkgp kqssikvrra kpgdnpkarp
      361 rdrqlirdrl kelrelvpng akysidglld qtikhmvylr rvtnqveklq qwahrevtsr
      421 knirssetke nyqletswgf eigdepnvyp ivvedlpypg hllieqmlcn ehglfleiaq
      481 virsfnltil kgvmesyann kwahfiveas rsfhrldifw plmqllqrqr npisski
//
LOCUS       XP_016729847             536 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor EMB1444 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016729847
VERSION     XP_016729847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..536
                     /product="transcription factor EMB1444 isoform X2"
                     /calculated_mol_wt=61134
     Region          6..170
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     Region          354..411
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(359..360,362,367,384..385)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(365..366,369..370,372..373,377,385..386,389..390,
                     393,395..396,399..400)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..536
                     /gene="LOC107940895"
                     /coded_by="XM_016874358.2:404..2014"
                     /db_xref="GeneID:107940895"
ORIGIN      
        1 maatglrqll ksfctnspwk yavlwklghq spmsltwede ycvypipses mesissdvys
       61 nseiipsqfe tsmdlvvahm shlkytlgkg vvgkvahtgk hywvsyddnf tskanwtmvd
      121 ecpeewlfqf algiktivli pvlphgvvql aslemvaeds sitayikdrf kcnsihtelp
      181 sspissfpen leessttasm nplnsedpnt vdtvnhytfh vpgtylyeil diecenrinv
      241 nnasffsfpk gcelhkallg ppfrrqsnef lwenedlfsg lkpgsmlaeg sepdylleav
      301 vghvyegsfh mpnrsntqlp tssqpqtves dyygetqkgp kqssikvrra kpgdnpkarp
      361 rdrqlirdrl kelrelvpng akysidglld qtikhmvylr rvtnqveklq qwahrevtsr
      421 knirssetke nyqletswgf eigdepnvyp ivvedlpypg hlliemlcne hglfleiaqv
      481 irsfnltilk gvmesyannk wahfiveasr sfhrldifwp lmqllqrqrn pisski
//
LOCUS       XP_016729848             480 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor EMB1444 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016729848
VERSION     XP_016729848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="transcription factor EMB1444 isoform X3"
                     /calculated_mol_wt=54847
     Region          6..113
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     Region          297..354
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(302..303,305,310,327..328)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(308..309,312..313,315..316,320,328..329,332..333,
                     336,338..339,342..343)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..480
                     /gene="LOC107940895"
                     /coded_by="XM_016874359.2:313..1755"
                     /db_xref="GeneID:107940895"
ORIGIN      
        1 maatglrqll ksfctnspwk yavlwklghq spmvvgkvah tgkhywvsyd dnftskanwt
       61 mvdecpeewl fqfalgikti vlipvlphgv vqlaslemva edssitayik drfkcnsiht
      121 elpsspissf penleesstt asmnplnsed pntvdtvnhy tfhvpgtyly eildiecenr
      181 invnnasffs fpkgcelhka llgppfrrqs neflwenedl fsglkpgsml aegsepdyll
      241 eavvghvyeg sfhmpnrsnt qlptssqpqt vesdyygetq kgpkqssikv rrakpgdnpk
      301 arprdrqlir drlkelrelv pngakysidg lldqtikhmv ylrrvtnqve klqqwahrev
      361 tsrknirsse tkenyqlets wgfeigdepn vypivvedlp ypghllieqm lcnehglfle
      421 iaqvirsfnl tilkgvmesy annkwahfiv easrsfhrld ifwplmqllq rqrnpisski
//
LOCUS       XP_040943652             479 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor EMB1444 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943652
VERSION     XP_040943652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087718.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..479
                     /product="transcription factor EMB1444 isoform X4"
                     /calculated_mol_wt=54718
     Region          6..113
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     Region          297..354
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(302..303,305,310,327..328)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(308..309,312..313,315..316,320,328..329,332..333,
                     336,338..339,342..343)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..479
                     /gene="LOC107940895"
                     /coded_by="XM_041087718.1:310..1749"
                     /db_xref="GeneID:107940895"
ORIGIN      
        1 maatglrqll ksfctnspwk yavlwklghq spmvvgkvah tgkhywvsyd dnftskanwt
       61 mvdecpeewl fqfalgikti vlipvlphgv vqlaslemva edssitayik drfkcnsiht
      121 elpsspissf penleesstt asmnplnsed pntvdtvnhy tfhvpgtyly eildiecenr
      181 invnnasffs fpkgcelhka llgppfrrqs neflwenedl fsglkpgsml aegsepdyll
      241 eavvghvyeg sfhmpnrsnt qlptssqpqt vesdyygetq kgpkqssikv rrakpgdnpk
      301 arprdrqlir drlkelrelv pngakysidg lldqtikhmv ylrrvtnqve klqqwahrev
      361 tsrknirsse tkenyqlets wgfeigdepn vypivvedlp ypghllieml cnehglflei
      421 aqvirsfnlt ilkgvmesya nnkwahfive asrsfhrldi fwplmqllqr qrnpisski
//
LOCUS       XP_016729856             182 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional regulator TAC1 [Gossypium hirsutum].
ACCESSION   XP_016729856
VERSION     XP_016729856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..182
                     /product="transcriptional regulator TAC1"
                     /calculated_mol_wt=20098
     Region          30..54
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..182
                     /gene="LOC107940902"
                     /coded_by="XM_016874367.2:80..628"
                     /db_xref="GeneID:107940902"
ORIGIN      
        1 metkhpklek pdqivwslee ddvsihsksy tcsfckkgfl naqalgghmn ihrkdraklr
       61 esfeenvlis svitlglvqv qdryliseti lessgekkvp rdddngsgas pkgkdgvgen
      121 srsshgsssq veldlelrlg pdsrasrgsl smkwiisyrg rnptilasie klfsiymtdd
      181 da
//
LOCUS       XP_040943654             672 aa            linear   PLN 06-AUG-2024
DEFINITION  L-type lectin-domain containing receptor kinase S.4-like [Gossypium
            hirsutum].
ACCESSION   XP_040943654
VERSION     XP_040943654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087720.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..672
                     /product="L-type lectin-domain containing receptor kinase
                     S.4-like"
                     /calculated_mol_wt=73884
     Region          28..266
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            128
                     /site_type="other"
                     /note="N-linked glycosylation site"
                     /db_xref="CDD:173887"
     Site            order(143,145,159)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     Region          351..617
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(351..355,359,372,374,403,419..422,426,428,470,472,
                     474..475,477,488,491,508..511)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(351..355,359,372,374,403,419..422,426,470,472,
                     474..475,477,488)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(355,426,428,470,472,474,491,508..511)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(487..494,504..511)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..672
                     /gene="LOC121214057"
                     /coded_by="XM_041087720.1:112..2130"
                     /db_xref="GeneID:121214057"
ORIGIN      
        1 mpyfllvllt lipllissss qptdtlffpg fkppnlstnl tltgsaeiqa ngilkltndt
       61 srlqghafys spfrfknssn gqafsfsttf amaivpeypk lgghglafti aaskdlkalp
      121 sqylgilnat dvgnssdylv avefdtvqdf efqdindnhv gidinslnst asvpagyyid
      181 gvglvkqnvs lksgkpilvw ieydsveklv nvtisssskk pslpilplkv dlspflqefm
      241 yvgfsastgl lasshyilgw sfkmngeaqa ldlsslpslp rppakhtalt vgvsvssvvf
      301 viaalsvavy ifmkiknadv iedweleigp qrydyhelkr atngfsdkal lghggfgkvy
      361 kgklkdsktq vavkrvshes kqglrefvse iasigrlrhr nlvqllgwcr rrgdlllvyd
      421 ymangsldkf lfddpkivln weqrlniikg vasgllylhe gyeqivihrd vkasnvlldd
      481 elngklgdfg laklyehgsn pgttrvvgtl gylapelpkt gkattssdvy afgaflleva
      541 cgrrpiesnv sqeelvlidw vwekftqgrl fdvvdirlnd kykedemlvv lklglicsnd
      601 vpmarpnmrq avryldgeae lpevlkpsri yegvgegfdt flhsfmsstf dntssysftd
      661 qhgnggtsiv sl
//
LOCUS       XP_040943655             672 aa            linear   PLN 06-AUG-2024
DEFINITION  L-type lectin-domain containing receptor kinase S.4 [Gossypium
            hirsutum].
ACCESSION   XP_040943655
VERSION     XP_040943655.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087721.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..672
                     /product="L-type lectin-domain containing receptor kinase
                     S.4"
                     /calculated_mol_wt=73774
     Region          28..266
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            order(39,69,72,174,200,211,213..215,223..225,227,239)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173887"
     Site            128
                     /site_type="other"
                     /note="N-linked glycosylation site"
                     /db_xref="CDD:173887"
     Site            order(143,145,159)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     Region          351..617
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(351..355,359,372,374,403,419..422,426,428,470,472,
                     474..475,477,488,491,508..511)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(351..355,359,372,374,403,419..422,426,470,472,
                     474..475,477,488)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(355,426,428,470,472,474,491,508..511)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(487..494,504..511)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..672
                     /gene="LOC121214058"
                     /coded_by="XM_041087721.1:153..2171"
                     /db_xref="GeneID:121214058"
ORIGIN      
        1 mpyflpvllt lipllisssf qptatlffpg fkspnlstnl tltgsaeiqa ngilkltkat
       61 dglqghafys spfrfknssn gqafsfsttf amaivpeytk lgghglafti aaskdlkalp
      121 rqylgilnat nmgnssdnlv avefdtvqnl efqdindnhv gidinslnsi asvpagyyid
      181 gvglvkqnvs lksgetilvw feydsveklv nvtislsskk pslpilqlkv dlspflqefm
      241 yvgfsastgl lasshyilgw sfkmngeaqa ldlsslpslp rppakhtalt vgvsvssvvl
      301 viaalsvavy ifmkiknadv iedweleigp qrydyhelkr atngfsdkal lghggfgkvy
      361 kgklkdsktq vavkrvshes kqglrefvse iasigrlrhr nlvqllgwcr rrgdlllvyd
      421 ymangsldkf lfddpkivln weqrlniikg vasgllylhe gyeqivihrd vkasnvlldd
      481 elngklgdfg laklyehgsn pgttrvvgtl gylapelpkt gkattssdvy afgaflleva
      541 cgrrpiesnv sqeelvlidw vwekftqgrl fdvvdirlnd kykedemllv lklglicsnd
      601 apkarpnmrq avryldgeae lpellkpsri yegvgegfda flhssmsstf dntssysftd
      661 qhgnggtsiv sl
//
LOCUS       XP_016729858             573 aa            linear   PLN 06-AUG-2024
DEFINITION  laccase-17 [Gossypium hirsutum].
ACCESSION   XP_016729858
VERSION     XP_016729858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..573
                     /product="laccase-17"
                     /calculated_mol_wt=63640
     Region          27..573
                     /region_name="laccase"
                     /note="plant; TIGR03389"
                     /db_xref="CDD:274556"
     CDS             1..573
                     /gene="LOC107940904"
                     /coded_by="XM_016874369.2:48..1769"
                     /db_xref="GeneID:107940904"
ORIGIN      
        1 maetshlssm amlfisffvv lmgnaegetr hytfniryhn vtrlchtrti lsvnrrypgp
       61 plvaregdrv ivkvvnhvan nvsihwhgir qlttgwsdgp syvtqcpiqt nqsyiynfti
      121 tgqrgtllwh ahiswlrati hgpiiilpkl nqsypfqkph kevtiilgew fnedpeaiis
      181 qalktgggpn vsdaytingl pgllyncssk dtyklkvkpg ktyllrlina alndelffti
      241 anhtltvveg daiytkpfdt dkllitpgqt tnvllktkpe ypnatfliaa rpystgqgtf
      301 dnsttmgvle yehpfkkpsk nptliqpnlp qindtqfvsn ftmkfrslan defpanvpkt
      361 vdkrffftvg lgtspcpknt tcqgptnstk faasvnnvsf tlpsvailqa yyfgqsngvy
      421 ttdfpvepmv pfnytgialn ntnvmngtrt vvlpfntsve lvmqdtsilg aeshplhlhg
      481 fnffvvgqgf gnfdpvkdpa kfnlvdpmer ntagvpaggw iairfladnp gvwfmhchld
      541 vhtswglkma wlvldgpepn qklqpppsdl pqc
//
LOCUS       XP_016729859             282 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein S-acyltransferase 16 [Gossypium hirsutum].
ACCESSION   XP_016729859
VERSION     XP_016729859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..282
                     /product="probable protein S-acyltransferase 16"
                     /calculated_mol_wt=31694
     Region          91..214
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..282
                     /gene="LOC107940905"
                     /coded_by="XM_016874370.2:191..1039"
                     /db_xref="GeneID:107940905"
ORIGIN      
        1 mkrgfsfsvt vvvsaivfiy fctvfvfidr wfglmtspgi mnavaftgva fmcvlnyaya
       61 iladpgrvps sfmpdiedpe vpiheikrkg gdlrfcqkcs cfkpprahhc rvckrcilrm
      121 dhhcnwinnc vghanykvff vfvvyaviac iyslillvgs ltndsqndkq rsadtfrvay
      181 visgpllvpl svalsvllgw hiylilqnkt tieyhegvra mwlaekggtv ykhpydigay
      241 enlttvlgps ifcwicpfsr hignglrfrt aydrvstsst sk
//
LOCUS       XP_016729857             817 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent zinc metalloprotease FTSH 10, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016729857
VERSION     XP_016729857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..817
                     /product="ATP-dependent zinc metalloprotease FTSH 10,
                     mitochondrial"
                     /calculated_mol_wt=90026
     Region          145..767
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..817
                     /gene="LOC107940903"
                     /coded_by="XM_016874368.2:228..2681"
                     /db_xref="GeneID:107940903"
ORIGIN      
        1 mifsrigrsl srssrsnfri nvisrkllry esnvpspvtn tcisrvnkgl glvrgyfapa
       61 gvgkqlstnt rlsnldsila nprirrsfcs egpkkrnyen yfpknkkdip kaneqksgsk
      121 edsgagepgn sqniqrlvqn ivttlllvgi tysslsgphe qqeisfqefk nkllepgmvd
      181 kivvsnksva kvyvrssprn asqttddpve apmngapart ktsqykyyfn igsvesfeek
      241 leeaqealgi dphnhvpvty vsevnwfqel mrfgptllil gslwfmgrkm qsgfgvggpg
      301 grggrglfnm gkaqitkmdk nakdkvffkd vagcdeakqe imefvhflkn pkkyeelgak
      361 iprgallvgp pgtgktllak atagesgvpf lsmsgsdfme mfvgvgpsrv rslfqearqc
      421 apsivfidei daigrargrg gfsggndere stlnqllvem dgfgttsgvv vlagtnrpdi
      481 ldrallrpgr fdrqitidkp dikgrdqifq iylkklkldn epsyysqrla altpgfagad
      541 ianvcneaal iaarnesavi tmehfegaid rvigglekkn kvisklerrt vayhesghav
      601 agwflehaep llkvtivprg taalgfaqyv pnenllmtke qlfdvtcmtl ggraaeqvll
      661 gkistgaqnd lekvtkmtya qvavygfsdk vgllsfpqrd dafemtkpys sktgaiidse
      721 vrewvgkayn rtvqlieehk ehvaqiaell lekevlhqed lvrvlgerpf ksseptnydr
      781 fkkgfqeedk sskdtstesk tvddngstpl epevvpa
//
LOCUS       XP_016729841             298 aa            linear   PLN 06-AUG-2024
DEFINITION  suppressor of disruption of TFIIS [Gossypium hirsutum].
ACCESSION   XP_016729841
VERSION     XP_016729841.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874352.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..298
                     /product="suppressor of disruption of TFIIS"
                     /calculated_mol_wt=32918
     Region          16..249
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(21..25,120..121,206,230..231,234..235)
                     /site_type="active"
                     /db_xref="CDD:319791"
     CDS             1..298
                     /gene="LOC107940890"
                     /coded_by="XM_016874352.2:169..1065"
                     /db_xref="GeneID:107940890"
ORIGIN      
        1 meyediygls prpkydcllf dlddtlypls sglakacgnn ikdymveklg igkekivels
       61 nylyknygtt maglravgyd fdyddyhsyv hgglpyenlk pdpqlrslll tlpirkiift
      121 nadrvhaika lsklgledcf egiicfetln pthkntvsdd eddveflgsv stttsvaknp
      181 eifdiighfa dpkpgatlpk tpivckpqds aielalkiak inpqrtlffd dsvrniqagk
      241 rvglhtvlvg tsqrpkgady alesihnikq alpelwetdv ksdvsyagqv avetpvia
//
LOCUS       XP_016729845             264 aa            linear   PLN 06-AUG-2024
DEFINITION  expansin-A6 [Gossypium hirsutum].
ACCESSION   XP_016729845
VERSION     XP_016729845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..264
                     /product="expansin-A6"
                     /calculated_mol_wt=28425
     Region          35..262
                     /region_name="PLN00050"
                     /note="expansin A; Provisional"
                     /db_xref="CDD:165628"
     CDS             1..264
                     /gene="LOC107940894"
                     /coded_by="XM_016874356.2:93..887"
                     /db_xref="GeneID:107940894"
ORIGIN      
        1 mataassssf tmlhlaslfs ifvlvnarip gvytggswet ahatfyggsd asgtmggacg
       61 ygnlysqgyg vntaalstal fnnglscgac feikcandpr wchpgspsif itatnfcppn
      121 falpsdnggw cnpprphfdl ampmflkiae yragivpvsf rrvpcrkqgg irftingfry
      181 fnlvlitnva gagdivkvsi kgtntgwtsm srnwgqnwqs nvilvgqals frvkgsdkrt
      241 stswnvaptn wqfgqtftgk nfry
//
LOCUS       XP_016728805             371 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL10 [Gossypium
            hirsutum].
ACCESSION   XP_016728805
VERSION     XP_016728805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="probable serine/threonine-protein kinase PBL10"
                     /calculated_mol_wt=41257
     Region          81..360
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(81..85,89,111,113,142,158..161,165,167,210,212,
                     214..215,217,228,231,249..252)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(81..85,89,111,113,142,158..161,165,210,212,214..215,
                     217,228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(85,165,167,210,212,214,231,249..252)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(227..234,245..252)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..371
                     /gene="LOC107939926"
                     /coded_by="XM_016873316.2:357..1472"
                     /db_xref="GeneID:107939926"
ORIGIN      
        1 mgacwsnqik siwssttvkt ssearndknw sgssskvssa ctipqqpsrs egeilqssil
       61 ksftfielra strnfrpdsv lgqggfgsvy kgwvdehslt atkpgsgili avkrhnqdgi
      121 qghkewlaei nylgqlyhpn lvkligycle dehrllvyef mprgsmenhl frrgshfqpl
      181 swgvrmkval gaakglaflh naetqviyrd fktsnillds dynaklsdfg lardgptgdr
      241 shvstrvmgt hgyaapeyla tghltaksdi ysfgvvllei icgrraidkn kpsgehnlve
      301 wakpyltnkr rvfrvldtrl qgqyslnrvq kaahlalhcl akepksrpsm devvkrleql
      361 qvrggtpgna m
//
LOCUS       XP_016728802            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016728802
VERSION     XP_016728802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_016873313.2:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_016728803            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016728803
VERSION     XP_016728803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_016873314.2:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_016728804            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016728804
VERSION     XP_016728804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_016873315.2:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_040943657            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943657
VERSION     XP_040943657.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087723.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_041087723.1:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_040943658            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943658
VERSION     XP_040943658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087724.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_041087724.1:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_040943659            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943659
VERSION     XP_040943659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087725.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_041087725.1:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_040943660            2014 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943660
VERSION     XP_040943660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087726.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..2014
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X1"
                     /calculated_mol_wt=225271
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1993
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..2014
                     /gene="LOC107939925"
                     /coded_by="XM_041087726.1:152..6196"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeedne mrrgkplyln
     1981 eeryaaltnm vashgldqss kvlgqttigt fftv
//
LOCUS       XP_040943662            1980 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943662
VERSION     XP_040943662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087728.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1980
                     /product="E3 ubiquitin-protein ligase PRT6 isoform X2"
                     /calculated_mol_wt=221502
     Region          116..185
                     /region_name="UBR-box_UBR3"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-3 (UBR3) and similar proteins; cd19673"
                     /db_xref="CDD:439071"
     Site            order(118,134,143,146,152,167,169,181)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439071"
     Region          1387..1447
                     /region_name="RING-H2_UBR1-like"
                     /note="RING finger, H2 subclass, found in
                     ubiquitin-protein ligase E3-alpha-1 (UBR1), E3-alpha-2
                     (UBR2), and similar proteins; cd16482"
                     /db_xref="CDD:438145"
     Region          1521..1967
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..1980
                     /gene="LOC107939925"
                     /coded_by="XM_041087728.1:152..6094"
                     /db_xref="GeneID:107939925"
ORIGIN      
        1 mesptkfssi ephdrviqrl aalgipveyl drhyegivdf vsdnglslei vfailptdee
       61 mvesiqdarl kskkwlcvsv knwfreslvw lqwlmfrgep vnafrslakl svdqrgvcaa
      121 vwgsndiayr crtcevdptc aicvpcfqng nhkghdfsif ktgggccdcg detawkhegf
      181 cskhkgaeqi qqlpetiads vglvldvlfn fwrnklflae gifegttges dsgneqgkaa
      241 neltylvvem lldfcnkses llsfvskrmi sldgllgili raerfigdgv vkklhelllk
      301 llaepifkne fskvflsyyp tvineaikdg sgsilkskyp listfsaqif tvptltarlv
      361 kemdllgvll kclgnifisc sqkdghlkvt klgslyyttf lvvehirfvm shdvvskyat
      421 heqqdivrtw lkllafvqgi nlikretklh ieeendsihl pfvlgsfian ihsplvdgaf
      481 svavseetnv lpytfkqdmd dgdgvrhakv grlsqessvc sltgrsmskv tevesdsvsh
      541 lsvpssaiwl iqeclrvlet wlevddgisa alqsiyspns ngisdrnlla kkrikyeirg
      601 gkyfrkltgs senhcsesss pvynghlasd dmemetgtgt gladipvlsl sewpdiiydv
      661 ssqeisvhip lhrllslllq kalkscyges vmpnvtnssc spsllsptya dffghilggc
      721 hpfgfsasvm ehplrirvfc sqflsgmwlk ngdaglvsyk wseegleldl fllqccaala
      781 apdlyvtril erfgllnyls lnlersneye pilvkemltl imqilqerrf sgrsiadslk
      841 refiyklaig dathsqllks lpcelskfdq lqeildkvaa ysnpsdlnqg myslhgvywk
      901 eldlyhprws srdlqvaeer yfrfcgvsam ttqlprwtki ypplegvari atcrvtlkii
      961 ravlfyfvft dkctesrasd gilmralhll slaldiylqq ngatdverhi edsysmpvfa
     1021 veeigeslns aaskqsllsl lvalmrmhqq vnrnsyldss nsnfsplves llkkfaevds
     1081 hcfaklqlla pevvsclsks ipttdstsnm hkakarerqa aimakmkveq skflssitsd
     1141 adydsnseae mpnsapehet egavqqscsl chdptsknpv sflillqksr ilsfvdrrcp
     1201 sgdrwadkkq gsiptnrvtd qsgsngssss sglssppfql tensvvesgd neqaqcgevn
     1261 vilefiksrf pslrstqapf sssymrdsse ynletleedm cirirkemcd tslssslkkd
     1321 dvsfasggsl gssrdadchg pgkyiaslss ktsenslgfe ncngdrelte saskpfaydg
     1381 lglldcdgih lsscghavhq dcldsylssl keryarrsff egalildldk geflcpvcrq
     1441 lanailpavn grtgrqamsv tvdplpalgs psasneeicp lmlqqglcll ktaakvvgrp
     1501 dfikalsrqr testsqdlep isralykmnf sknqemlfgs srlshtiiiw dilkyslmst
     1561 evaarglkts latnytltsl ykefksssef ifslllrvvq nlsnsnslha lqrfralqlf
     1621 aqsicngils dyhstrhkve enllrilkpd dkealnpgiq fwnraadsvl ahdpfsslmw
     1681 vlfslpfpfl sceesmlslv hvfyvvsviq aiitcriqgy nvnelssqhc litdicnilg
     1741 esdfarwyfi snevelscdi kdiirrlsfp ylrrcallwk mlkssvrspf cdsdnmwkls
     1801 dmmdatkits melneaqkle kmfkippvdv ildnevarlf alkwfrhfhn vyrtssvqnv
     1861 fycnpvvpfk llslphvyqd lflryisqcc pdcktvvhep alcllcgrlc ssiwkpccre
     1921 sgckshaksc gagigvflli krttillqrc arqapwpspy ldafgeevri tkcveenlst
//
LOCUS       XP_016728795              82 aa            linear   PLN 06-AUG-2024
DEFINITION  metallothionein-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016728795
VERSION     XP_016728795.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873306.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728795.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..82
                     /product="metallothionein-like protein 2"
                     /calculated_mol_wt=8052
     Region          1..81
                     /region_name="Metallothio_2"
                     /note="Metallothionein; pfam01439"
                     /db_xref="CDD:396155"
     CDS             1..82
                     /gene="LOC107939919"
                     /coded_by="XM_016873306.2:256..504"
                     /db_xref="GeneID:107939919"
ORIGIN      
        1 msccggncgc gsgckcgggg gcgcggckmy pemnfaeqtt tetlvlgvap rkvnfdgaem
       61 etgaengckc gdnctcnpcn ck
//
LOCUS       XP_040943663             439 aa            linear   PLN 06-AUG-2024
DEFINITION  pectin acetylesterase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943663
VERSION     XP_040943663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087729.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..439
                     /product="pectin acetylesterase 5 isoform X1"
                     /calculated_mol_wt=48675
     Region          61..410
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..439
                     /gene="LOC107939908"
                     /coded_by="XM_041087729.1:24..1343"
                     /db_xref="GeneID:107939908"
ORIGIN      
        1 mantgfcafc crrkwvkrdw aiatvaitvi iaavitvilf ytvfsdsrnr ktssptfapp
       61 sagdfvpltl lqsakatgaf cldgslpgyh fqkgfgsgss nwllhieggg wcnsiescns
      121 rkgtslgssn ymehqvqfsg ilsqdpsqnp dfynwnkvkl rycdgasfag hpesefkngt
      181 elffrgqliw eammnellsl glskakeall tgcsagglat fihcddfrdq lpkdatvkcl
      241 adagyfldep dilgnrtmla fyrdvlqlqg vakslqqdcv grmepvkcif pqeiiknvkt
      301 pffvvnpayd swqienilvp igsdpqgyws scrlsikkcd atqikrlqgy rdamlkalsm
      361 fqrneeggmf inscfshcqt sysawhspns prinnktmae svgdwyfnrk esklidcpyp
      421 cnptcnnddy tssvlsaav
//
LOCUS       XP_040943664             431 aa            linear   PLN 06-AUG-2024
DEFINITION  pectin acetylesterase 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943664
VERSION     XP_040943664.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087730.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..431
                     /product="pectin acetylesterase 5 isoform X2"
                     /calculated_mol_wt=47960
     Region          61..410
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..431
                     /gene="LOC107939908"
                     /coded_by="XM_041087730.1:24..1319"
                     /db_xref="GeneID:107939908"
ORIGIN      
        1 mantgfcafc crrkwvkrdw aiatvaitvi iaavitvilf ytvfsdsrnr ktssptfapp
       61 sagdfvpltl lqsakatgaf cldgslpgyh fqkgfgsgss nwllhieggg wcnsiescns
      121 rkgtslgssn ymehqvqfsg ilsqdpsqnp dfynwnkvkl rycdgasfag hpesefkngt
      181 elffrgqliw eammnellsl glskakeall tgcsagglat fihcddfrdq lpkdatvkcl
      241 adagyfldep dilgnrtmla fyrdvlqlqg vakslqqdcv grmepvkcif pqeiiknvkt
      301 pffvvnpayd swqienilvp igsdpqgyws scrlsikkcd atqikrlqgy rdamlkalsm
      361 fqrneeggmf inscfshcqt sysawhspns prinnktmae svgdwyfnrk esklidcpyp
      421 cnptcnnddy t
//
LOCUS       XP_016728813             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_016728813
VERSION     XP_016728813.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873324.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41533
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107939935"
                     /coded_by="XM_016873324.2:136..1269"
                     /db_xref="GeneID:107939935"
ORIGIN      
        1 maegediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpilltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssvek
      241 syelpdgqvi tigaerfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_040943665             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_040943665
VERSION     XP_040943665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087731.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41533
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107939935"
                     /coded_by="XM_041087731.1:113..1246"
                     /db_xref="GeneID:107939935"
ORIGIN      
        1 maegediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpilltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssvek
      241 syelpdgqvi tigaerfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_016728814             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_016728814
VERSION     XP_016728814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873325.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41533
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107939935"
                     /coded_by="XM_016873325.2:118..1251"
                     /db_xref="GeneID:107939935"
ORIGIN      
        1 maegediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpilltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssvek
      241 syelpdgqvi tigaerfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_040943667             377 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-like [Gossypium hirsutum].
ACCESSION   XP_040943667
VERSION     XP_040943667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087733.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..377
                     /product="actin-like"
                     /calculated_mol_wt=41533
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="LOC107939935"
                     /coded_by="XM_041087733.1:124..1257"
                     /db_xref="GeneID:107939935"
ORIGIN      
        1 maegediqpl vcdngtgmvk agfagddapr avfpsivgrp rhtgvmvgmg qkdayvgdea
       61 qskrgiltlk ypiehgivnn wddmekiwhh tfynelrvap eehpilltea plnpkanrek
      121 mtqimfetfn apamyvaiqa vlslyasgrt tgivldsgdg vshtvpiyeg yalphailrl
      181 dlagrdltda lmkiltergy sftttaerei vrdvkeklsy ialdfeqele taktsssvek
      241 syelpdgqvi tigaerfrcp evlfqpsmig meaagihett ynsimkcdvd irkdlygniv
      301 lsggttmfpg iadrmskeit alapssmkik vvapperkys vwiggsilas lstfqqmwia
      361 kaeydesgps ivhrkcf
//
LOCUS       XP_016728799             155 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-dependent protein kinase inhibitor SMR1 [Gossypium
            hirsutum].
ACCESSION   XP_016728799
VERSION     XP_016728799.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728799.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..155
                     /product="cyclin-dependent protein kinase inhibitor SMR1"
                     /calculated_mol_wt=17527
     Region          <66..>100
                     /region_name="PLN03031"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215546"
     CDS             1..155
                     /gene="LOC107939923"
                     /coded_by="XM_016873310.2:182..649"
                     /db_xref="GeneID:107939923"
ORIGIN      
        1 mmmklkgpah wsfkkkkkkk kmmmislgel kvidddgdde dededernsl efqdkkkiis
       61 lgesranddg dddgfktpts ldhkipvmkq cppaprkpkp lssnkrkpss ppsssgdrnl
      121 lkidfakeve slfpsdvlad thrkvkkark edynq
//
LOCUS       XP_040943668             940 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein 44 [Gossypium hirsutum].
ACCESSION   XP_040943668
VERSION     XP_040943668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087734.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..940
                     /product="WD repeat-containing protein 44"
                     /calculated_mol_wt=103848
     Region          <425..724
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          435..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          512..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          563..599
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          604..639
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          654..690
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          697..721
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..940
                     /gene="LOC107939913"
                     /coded_by="XM_041087734.1:215..3037"
                     /db_xref="GeneID:107939913"
ORIGIN      
        1 meprklerrk tmtmnwdglg ddddeffeps nrvssavprd ltdedsddfd dcrhsfssng
       61 spihrakava tvappivapp imppmspnyd iwksspgsik hrrqqlfqgm glsankells
      121 fkhldtnkvl ngsvrttlpp ppppppkvtt tvttdskdek nkkdgskesk prsgsvggsr
      181 sdgemellsi ekkrkkqllg svskqslrrt sslmstpraq sypnkeatak kastkdatav
      241 assgsnnnnn nnvstkqndg ltsafsdnnf eaffliknld ngkefivnef dqdgmwnkls
      301 diqtgkqltm defeksvgys pvvkdlmsrd envnrmvtnq hgsdrklnsy fskslkvskk
      361 rgaavlksik gvatsmtlrg ekekeqnlfn vdqkknngns nnnqwvkvrq tgksykelsa
      421 lhlcqeiqah egsiwsikfs tnarflasag edtmiyvwev qecevkpmne acsspedkkk
      481 kgkgsssskk gnqvpnyvha petvfslsdk picsfkghld dvldlswsrs qqllsssmdk
      541 tvrlwdldtk sclklfahnd yvtcihfnpm dddyfisgsl dtkvriwnip krqvvdwtdi
      601 nemvtavcyt pdgqgaiigt hkgscrvyst edcrltqldq ittqnkkkdn akkitgfqyc
      661 pinptellit sadsrirvld gpevfykfkg fkntnsqiaa tftsdgtyvi sasedsqvfi
      721 wrteeprntg tgkrsvitar gheyfpckdv svaipwpgti kseplsmtvs shlkrnpksl
      781 qvpngesptk ndhnkkilpf pplpkkksnh hlgkiitded gemadsmsrs stasassrss
      841 svsnddssss tstssmsrss tlsgasnlns sgsnrasgsi rygdspsiss figsspwswf
      901 nvsshghnaa awglvivtat lsgeiriyqn fglprrvsrl
//
LOCUS       XP_040943669             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943669
VERSION     XP_040943669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087735.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..152
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16926
     CDS             1..152
                     /gene="LOC121214059"
                     /coded_by="XM_041087735.1:8..466"
                     /db_xref="GeneID:121214059"
ORIGIN      
        1 mtesirleds splatvediq krllrpaslh sppegsnsla lkvnskqsgr tvkkrledyl
       61 dpvilagiss risrskkakl etkfkgfewp vdelkvfvee dsrnsnggsw rnkaidlndd
      121 fdvlrdgsdg deeigspfqr vgkktalkkf eh
//
LOCUS       XP_040943670             480 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943670
VERSION     XP_040943670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087736.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="uncharacterized protein"
                     /calculated_mol_wt=54451
     Region          352..454
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(352..355,362,364,366..367,423,443,447)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..480
                     /gene="LOC107939929"
                     /coded_by="XM_041087736.1:492..1934"
                     /db_xref="GeneID:107939929"
ORIGIN      
        1 mgasllttfs menhhpstll smdssahdef dleknrqsvl srppdinlpl saerspplqq
       61 pwnsdhcdvl dvglcsqaye tesylpvska grkcakrvds iwgawlffsf yfkpalneks
      121 kakivrdsng vsgfdkldlk ldvfmvqhdm enmymwvfke kpenalgkmq lrsymnghsr
      181 qgerlfpfsv dkgfirshrm qrkhyrglsn pqcvhgvelv pspnlmalse edrkkwvelt
      241 grglnftipp easdfsswrn lpntdfeler ppiiksvlnl stqssshmds dgtdlslvsn
      301 krrkdddcyl pvippsdrip dmeihpseph wlndfsgvmk naygpvtaak aiyedkagyl
      361 iiislpfvdl qrvkvswrnt lthgiiklsc vsttgmpfik rhnrtfkltd papehcppge
      421 fvreiplstr ipedadieay hdgpgsvlei mvpklrmvpe eheirvclrp khvgndlllt
//
LOCUS       XP_016728807             493 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728807
VERSION     XP_016728807.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728807.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="uncharacterized protein"
                     /calculated_mol_wt=55920
     Region          365..467
                     /region_name="ACD_sHsps-like"
                     /note="Alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are generally...;
                     cd06464"
                     /db_xref="CDD:107221"
     Site            order(365..368,375,377,379..380,436,456,460)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107221"
     CDS             1..493
                     /gene="LOC107939928"
                     /coded_by="XM_016873318.2:385..1866"
                     /db_xref="GeneID:107939928"
ORIGIN      
        1 mgasllttfs menhhpstll smdssahdef dldknrqsil srppdinlpl saerspppqq
       61 pwnsdqcdil dvglcsqaye tesylpvska grkctkrvds iwgawlffsf yfkpalneks
      121 kakivrdsng vsgfdksdlk ldvfmvqhdm enmymwvfke kpenalgkmq lrsymnghsr
      181 qgerpfpfsv dkgfirshrm qrkhyrglsn pqcvhgielv pspnlmalse edrkkwielt
      241 grdlnftipp easdfsswrn lpntdfeler pqiikniphs hsrkllngsg lnlstqsssh
      301 tygdgtdlsl vsnkrrkddd cflpvisppd ripdmeihps ephwlndfsg vmkssygpvt
      361 aakaiyedea gyliiislpf vdlqrvkvsw rntlthgiik lsclstsgmp fikrhnrtlk
      421 ltdpspehcp pgefvreipl stripedadi eayhdgpgsv leimvpklrm vpeeheirvc
      481 lrpkhvgndl mlt
//
LOCUS       XP_016728806             648 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: heat shock cognate 70 kDa protein 2 [Gossypium
            hirsutum].
ACCESSION   XP_016728806
VERSION     XP_016728806.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873317.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728806.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..648
                     /product="LOW QUALITY PROTEIN: heat shock cognate 70 kDa
                     protein 2"
                     /calculated_mol_wt=70946
     Region          5..648
                     /region_name="PTZ00009"
                     /note="heat shock 70 kDa protein; Provisional"
                     /db_xref="CDD:240227"
     CDS             1..648
                     /gene="LOC107939927"
                     /coded_by="XM_016873317.2:214..2160"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107939927"
ORIGIN      
        1 magkgegpai gidlgttysc vgvwqhdrve iiandqgnrt tpsyvgftdt erligdaakn
       61 qvamnpintv fdakrligrr ftdssvqsdi klwpfkviag pgdkpmivvn ykgeekqfaa
      121 eeissmvlik mreiaeaylg ftvknavvtv payfndsqrq atkdagviag lnvmriinep
      181 taaaiaygld kkatsvgekn vlifdlgggt fdvslltiee gifevkatag dthlggedfd
      241 nrmvnhfvqe fkrknkkdis gnpralrrlr tscerakrtl sstaqttiei dslyegidfy
      301 stitrarfee lnmdlfrkcm epvekclrda kmdkssvhdv vlvggstrip kvqqllqdff
      361 ngkelcksin pdeavaygaa vqaailsgeg nekvqdllll dvtplslgle taggvmtvli
      421 prnttiptkk eqvfstysdn qpgvliqvye gertrtrdnn llgkfelsgi ppaprgvpqi
      481 tvcfdidang ilnvsaedkt tgqknkitit ndkgrlskee iekmvqeaek yksedeehkk
      541 kvesknalen yaynmrntvk dekigsklsp ddxekiedai eeaiqwldsn qlaeadefed
      601 kmkelesvcn piiakmyqga ggdmggsmde dappsggsga gpkieevd
//
LOCUS       XP_016728810             800 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728810
VERSION     XP_016728810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873321.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..800
                     /product="uncharacterized protein"
                     /calculated_mol_wt=89542
     Region          385..604
                     /region_name="YccC"
                     /note="Uncharacterized membrane protein YccC [Function
                     unknown]; COG1289"
                     /db_xref="CDD:440900"
     CDS             1..800
                     /gene="LOC107939932"
                     /coded_by="XM_016873321.2:1..2403"
                     /db_xref="GeneID:107939932"
ORIGIN      
        1 mdssqapwrl rlesalrtvl acsivgcttl ygpesvrhti tfpafsyvtt ilivsdatlg
       61 dalrgcwhvl casiqvilps mlilrligps rfnfglaava valssflial pgsthltakr
      121 iafgqtviiy vgaviqgakt giiihpihva astalgavas ilamlfpyph layrevrkic
      181 rfyaenasnr fnllveafca kgdmaahnli tdarllskag akligsikdk hegmlwekpw
      241 lrflkpkrsd pgeklqemdm piqgmewalt tctsfpvrmm deelvdvlqi ekkqialkle
      301 qamrsvpfda attpdmkgen tdrspwtqka istnredlss ffflycmell qdgpacilkn
      361 geeakiqess qpkkqgksrv kqmqsfhren fvfaikcsls lglavlfgli ynkengywsg
      421 ltiaisfvte rqatfmvana raqgtamgsv ygilccfifk kltdlrflll lpwiiftsfl
      481 rhsrmygqag giaavigasl ilgrknygtp sefaiartae atigllcfva veilfhpsrs
      541 atlaktelsr tlravqdcfk vislhtdrke nlmelmrekq kklkyhvrel qnfiaeaele
      601 pnfwflpfhc gcynkllisi ckmtdllhft ihligflsaa sqmlgvtwee iqeqiknile
      661 hlvdktgsls kcldkvllik sleeiekqlq mesvsqdlel gkspnadvst rlgyeetsis
      721 eieksflqyt irvadktern eveemlksqm vlclsslgyc lndlkreate tekeiaellk
      781 wenptrhvnf pellsklhat
//
LOCUS       XP_016728811              37 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 4C [Gossypium hirsutum].
ACCESSION   XP_016728811
VERSION     XP_016728811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..37
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 4C"
                     /calculated_mol_wt=4220
     Region          1..34
                     /region_name="Ost4"
                     /note="Oligosaccaryltransferase; pfam10215"
                     /db_xref="CDD:431142"
     CDS             1..37
                     /gene="LOC107939934"
                     /coded_by="XM_016873322.2:1..114"
                     /db_xref="GeneID:107939934"
ORIGIN      
        1 middqdlgff asflgififv lviayhfvma dpkyeny
//
LOCUS       XP_016728798             143 aa            linear   PLN 06-AUG-2024
DEFINITION  copper transporter 4 [Gossypium hirsutum].
ACCESSION   XP_016728798
VERSION     XP_016728798.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728798.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..143
                     /product="copper transporter 4"
                     /calculated_mol_wt=15504
     Region          26..125
                     /region_name="Ctr"
                     /note="Ctr copper transporter family; pfam04145"
                     /db_xref="CDD:461194"
     CDS             1..143
                     /gene="LOC107939922"
                     /coded_by="XM_016873309.2:222..653"
                     /db_xref="GeneID:107939922"
ORIGIN      
        1 manmaettsa wnttglhvhr ksllhmsfyw ghkseilfsg wpgcnsgmya lalilvfala
       61 mvvewlsycs iikpgankva agffqtamht vraglsymvm lavmsfnggv flaavfghai
      121 gflvfgskaf rkaekvpdlp prk
//
LOCUS       XP_040943672             316 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol:ceramide inositolphosphotransferase 1 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040943672
VERSION     XP_040943672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087738.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..316
                     /product="phosphatidylinositol:ceramide
                     inositolphosphotransferase 1 isoform X1"
                     /calculated_mol_wt=36037
     Region          172..240
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..316
                     /gene="LOC107939904"
                     /coded_by="XM_041087738.1:451..1401"
                     /db_xref="GeneID:107939904"
ORIGIN      
        1 mtlyigreas klwkricaet saesnlfidn wkyiiagfvf qyihgvaarg vhylhqpgpt
       61 lqdlgffllp elgqdkayis etvfmfvfls fflwtfhpfv vkvkkfytvq iwcrvlaylv
      121 vsqtlriftf ystqlpgpny hcrpgsklar lpepdgvlev lvinfpqgvi ygcgdlifss
      181 hmiftlvfvl tyqkygtrrc ikqfgwsiai iqsllivasr khytvdvvva wytvnlvvff
      241 vdkklpelsg rtngsslill plstkdkdkw tkeenhklln gnsvnpadrr prsqsngknl
      301 edvninqvdt smnstp
//
LOCUS       XP_040943673             296 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol:ceramide inositolphosphotransferase 1 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040943673
VERSION     XP_040943673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087739.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..296
                     /product="phosphatidylinositol:ceramide
                     inositolphosphotransferase 1 isoform X2"
                     /calculated_mol_wt=33823
     Region          172..240
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..296
                     /gene="LOC107939904"
                     /coded_by="XM_041087739.1:455..1345"
                     /db_xref="GeneID:107939904"
ORIGIN      
        1 mtlyigreas klwkricaet saesnlfidn wkyiiagfvf qyihgvaarg vhylhqpgpt
       61 lqdlgffllp elgqdkayis etvfmfvfls fflwtfhpfv vkvkkfytvq iwcrvlaylv
      121 vsqtlriftf ystqlpgpny hcrpgsklar lpepdgvlev lvinfpqgvi ygcgdlifss
      181 hmiftlvfvl tyqkygtrrc ikqfgwsiai iqsllivasr khytvdvvva wytvnlvvff
      241 vdkklpelsg rtngsslill plstkdkdkw tkeenhklln gnsvnpadrd lqvrsa
//
LOCUS       XP_040943675             286 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol:ceramide inositolphosphotransferase 1 isoform
            X3 [Gossypium hirsutum].
ACCESSION   XP_040943675
VERSION     XP_040943675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087741.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..286
                     /product="phosphatidylinositol:ceramide
                     inositolphosphotransferase 1 isoform X3"
                     /calculated_mol_wt=32491
     Region          142..210
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..286
                     /gene="LOC107939904"
                     /coded_by="XM_041087741.1:453..1313"
                     /db_xref="GeneID:107939904"
ORIGIN      
        1 mtlyigreas kyihgvaarg vhylhqpgpt lqdlgffllp elgqdkayis etvfmfvfls
       61 fflwtfhpfv vkvkkfytvq iwcrvlaylv vsqtlriftf ystqlpgpny hcrpgsklar
      121 lpepdgvlev lvinfpqgvi ygcgdlifss hmiftlvfvl tyqkygtrrc ikqfgwsiai
      181 iqsllivasr khytvdvvva wytvnlvvff vdkklpelsg rtngsslill plstkdkdkw
      241 tkeenhklln gnsvnpadrr prsqsngknl edvninqvdt smnstp
//
LOCUS       XP_040943676             266 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol:ceramide inositolphosphotransferase 1 isoform
            X4 [Gossypium hirsutum].
ACCESSION   XP_040943676
VERSION     XP_040943676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087742.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..266
                     /product="phosphatidylinositol:ceramide
                     inositolphosphotransferase 1 isoform X4"
                     /calculated_mol_wt=29969
     Region          122..190
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..266
                     /gene="LOC107939904"
                     /coded_by="XM_041087742.1:454..1254"
                     /db_xref="GeneID:107939904"
ORIGIN      
        1 mtlyigreas klwkricaet saesnlfidn wkyiiagfvf qyihgvaarg vhylhqpgpt
       61 lqdlgffllp vsqtlriftf ystqlpgpny hcrpgsklar lpepdgvlev lvinfpqgvi
      121 ygcgdlifss hmiftlvfvl tyqkygtrrc ikqfgwsiai iqsllivasr khytvdvvva
      181 wytvnlvvff vdkklpelsg rtngsslill plstkdkdkw tkeenhklln gnsvnpadrr
      241 prsqsngknl edvninqvdt smnstp
//
LOCUS       XP_016728789             492 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase BSK6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016728789
VERSION     XP_016728789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873300.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..492
                     /product="serine/threonine-protein kinase BSK6 isoform X1"
                     /calculated_mol_wt=55065
     Region          73..314
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          395..>480
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          424..451
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          456..480
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..492
                     /gene="LOC107939909"
                     /coded_by="XM_016873300.2:182..1660"
                     /db_xref="GeneID:107939909"
ORIGIN      
        1 mgarcskfsi cwfqshlkat vlessdldng gkgekqtwps ftefsleqmk aatngfssdn
       61 ivsehgekap nvvykgkllk ndhwvavkrf nkfawpdprq fledaravgs lrserlanli
      121 gcccegeerl lvaefmphet lakhlfhwen qpmkwamrlr valylaqale ycsskgraly
      181 hdlnayrilf dndgnprlsc fglmknsrdg ksystnlaft ppeylrtgrv taesvvysfg
      241 tllldlmsgk hippshaldl icgknflmlm dsaleghfsn ddgeelvrla srclqyeare
      301 rpnakslvvs lmslqkeaev psyvlmgipq gttspkqpls ltpfgeaclr fdltaiheil
      361 ekmgykddeg ianelsfqmw tsqmqdtlns kkhgdsafra kdftsainhy tqfidggtmv
      421 sptvyarrcl sylmndkpqe algdavqaqa vspewptafy lqaaclfslg mesdaqqnlk
      481 dgtnleakks kn
//
LOCUS       XP_040943677             406 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase BSK5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943677
VERSION     XP_040943677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087743.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..406
                     /product="serine/threonine-protein kinase BSK5 isoform X2"
                     /calculated_mol_wt=45621
     Region          73..314
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..406
                     /gene="LOC107939909"
                     /coded_by="XM_041087743.1:158..1378"
                     /db_xref="GeneID:107939909"
ORIGIN      
        1 mgarcskfsi cwfqshlkat vlessdldng gkgekqtwps ftefsleqmk aatngfssdn
       61 ivsehgekap nvvykgkllk ndhwvavkrf nkfawpdprq fledaravgs lrserlanli
      121 gcccegeerl lvaefmphet lakhlfhwen qpmkwamrlr valylaqale ycsskgraly
      181 hdlnayrilf dndgnprlsc fglmknsrdg ksystnlaft ppeylrtgrv taesvvysfg
      241 tllldlmsgk hippshaldl icgknflmlm dsaleghfsn ddgeelvrla srclqyeare
      301 rpnakslvvs lmslqkeaev psyvlmgipq gttspkqpls ltpfgeaclr fdltaiheil
      361 ekmgykddeg ianevhyfif dvlfaqivkh vilflskcgp akcrtp
//
LOCUS       XP_016728784             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728784
VERSION     XP_016728784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..179
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19132
     Region          24..178
                     /region_name="PAR1"
                     /note="PAR1 protein; pfam06521"
                     /db_xref="CDD:399493"
     CDS             1..179
                     /gene="LOC107939906"
                     /coded_by="XM_016873295.2:158..697"
                     /db_xref="GeneID:107939906"
ORIGIN      
        1 maslkfpivl fisslllhss laemicedlp kdvcafsias sgkrcvleta vkkdgdveyq
       61 crtsevvver maeyietdec vaacgvdrns vgissdslld qqftaklctp acyqkcpniv
      121 dlyfnlaage gvflpdlcna qrsnprrsmv elmlssgaap gpvssqaiav eapapspmw
//
LOCUS       XP_016728800            1068 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016728800
VERSION     XP_016728800.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873311.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728800.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1068
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=119667
     Region          3..>587
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          261..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..>975
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          333..356
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          357..379
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          380..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          405..428
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          429..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          453..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          478..502
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          530..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          553..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          601..669
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          623..646
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          671..695
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          696..719
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          720..741
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          744..767
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          867..890
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          891..914
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          915..936
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1068
                     /gene="LOC107939924"
                     /coded_by="XM_016873311.2:1..3207"
                     /db_xref="GeneID:107939924"
ORIGIN      
        1 mrmslfsllf lnsfvsvmli vnvvfvsaqc qsdqrqlllq lessfsynqt ssgklvpvkw
       61 nqstdccswd gvscdggghv igldlnsrsi sssiddsssl fllqrlqwln laynefklaf
      121 ptafdklenl sylnlsyagf egqipieisr ltrlvtldls vssllgrslk lekpnlemlv
      181 qnltrlrfly ldgvnisatv newckallpl telqelsmsr cylsgpihss lsnlrslsvi
      241 rldnnnlsas vpqfftefen ltslrlsatg lrgrlpeeif qiptlqildl stnkllegsf
      301 pnfplnaslr tlalsgtnyg gqvpesignl eqltrielgs cnfsgaipkt mkkltqlvyl
      361 dfsfnrfsgp ipsfssarnl iylslgynql ngaihstdws slskleivgl gnnklrgtip
      421 palfcipslq rlflsqnqfk gnlsdlhgra ssllydldls snklqgqfpm slfelrglkf
      481 lslssnnfsg lipmralqnl rnlsfldlsy nrlsidatdt nisslsfpni stlkltscnl
      541 tefpdflkyq srlsyldlsn nqiqgripnw iwkvrslnyl nlsqnflvef erslenidss
      601 lsvldlhgnq lqgqiqilpp catyldysnn kfssvlpaei gdflqfayff svsgnnfngs
      661 ipksicssly lrvldmsdny lsgpipqclt qmsaslgvln lrqnnlsgii sdtftkscsl
      721 qtldlnrnqv egkvpqslgn ckilevldig nnqisgsfpc hlenisklrv lvlrsnkfng
      781 sihcpknntg wpmlqifdla cnnfsgklhq twlatwkgmq vvddeaqskv kdiqfqflei
      841 npyryqdait vtikglerel vkiltvftti discnnfegp ipevigtfke lyglnfshna
      901 ftgpmpsflg nlrqlesldl ssnylsgeip lqlvnlnfls flnvsnnklv gqiptgtqlq
      961 sfskasfenn pglygppltv kcvnasrpkn dspsdsetgs iiewnllsve iglifglgii
     1021 ivpliywkrw riwyferihr alsrffpsls retkkhgrra nrnerrrl
//
LOCUS       XP_040943678             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943678
VERSION     XP_040943678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087744.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19165
     Region          24..181
                     /region_name="PAR1"
                     /note="PAR1 protein; pfam06521"
                     /db_xref="CDD:399493"
     CDS             1..181
                     /gene="LOC107939920"
                     /coded_by="XM_041087744.1:106..651"
                     /db_xref="GeneID:107939920"
ORIGIN      
        1 maslklpifl fisslslhas maeiicedlp kdvcafsias sgkrcvleta adkdddvehq
       61 crtsevvver madyiesdec vaacgvnrns igissdslld qqftvklcap acyqncpnvi
      121 dlyfnlaage gvflpdlcna qwsnprrsmv dlilssgaap gpvssqatgl faveapapap
      181 m
//
LOCUS       XP_040943680             810 aa            linear   PLN 06-AUG-2024
DEFINITION  neutral ceramidase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943680
VERSION     XP_040943680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087746.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..810
                     /product="neutral ceramidase 2 isoform X1"
                     /calculated_mol_wt=89457
     Region          36..645
                     /region_name="Ceramidase_alk"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     N-terminal; pfam04734"
                     /db_xref="CDD:461415"
     Region          647..809
                     /region_name="Ceramidse_alk_C"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     C-terminal; pfam17048"
                     /db_xref="CDD:465340"
     CDS             1..810
                     /gene="LOC107905649"
                     /coded_by="XM_041087746.1:304..2736"
                     /db_xref="GeneID:107905649"
ORIGIN      
        1 mkmvckdccf merpvrvlgf lflllqiegs ssasnyligl gtyditgpaa dvnmmgyanm
       61 eqiasgihfr lrartfivae pkgnrvvfvn ldacmasqiv tikvlerlka rygevytekn
      121 vaisgihtha gpggylqyvv yivtslgfvr qsfdvivdgi eksiiqahen lrpgsilink
      181 gelldaginr spsaylnnpa nerskykynv dkdmtlikfv deewgpigsf nwfathgtsm
      241 srtnslisgd nkgaaarfme dwfkqtsfta dydslsfnss vsgriprris siipnfhekr
      301 kelmelaasf kssqgrpvtr llsvarrvrn slrqadkpqf vsafcqtncg dvspntlgaf
      361 cidtglpcdf nhstcngkne lcygrgpgyp defksteiig kkqfkkavel fdkatekleg
      421 kvgyqhayid fsnlqvsvpk agggievvkt cpaamgfgfa agttdgpgaf dfrqgddqvr
      481 elkpdaadfn tcfvvpclsd dsitifcfqg nafwklvrnl lkppgqeqid cqkpkpilld
      541 tgemklpydw apsilpvqiv rigqlvilsv paefttmagr rlrdavktvl tsgrnkqfds
      601 nvhiviaglt ntysqyvttf eeyqvqryeg astlygphtl nayiqefkkl aaaligggsv
      661 epgpqppdll dkqislltpv vldatplgvn fgdvkddian stfkrgntvs vtfwsacprn
      721 dlmtegtfal vellqdqktw ipafddddfc lkfkwsrpak lspqsyatid wripesvvtg
      781 vyrirhfgas kslfgsirhf tgtssafvve
//
LOCUS       XP_016687834             779 aa            linear   PLN 06-AUG-2024
DEFINITION  neutral ceramidase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687834
VERSION     XP_016687834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..779
                     /product="neutral ceramidase 2 isoform X2"
                     /calculated_mol_wt=85980
     Region          36..614
                     /region_name="Ceramidase_alk"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     N-terminal; pfam04734"
                     /db_xref="CDD:461415"
     Region          616..778
                     /region_name="Ceramidse_alk_C"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     C-terminal; pfam17048"
                     /db_xref="CDD:465340"
     CDS             1..779
                     /gene="LOC107905649"
                     /coded_by="XM_016832345.2:304..2643"
                     /db_xref="GeneID:107905649"
ORIGIN      
        1 mkmvckdccf merpvrvlgf lflllqiegs ssasnyligl gtyditgpaa dvnmmgyanm
       61 eqiasgihfr lrartfivae pkgnrvvfvn ldacmasqiv tikvlerlka rygevytekn
      121 vaisgihtha gpggylqyvv yivtslgfvr qsfdvivdgi eksiiqahen lrpgsilink
      181 gelldaginr spsaylnnpa nerskykynv dkdmtlikfv deewgpigsf nwfathgtsm
      241 srtnslisgd nkgaaarfme dwfkqtsfta dydslsfnss vsgriprris siipnfhekr
      301 kelmelaasf kssqgrpvtr llsvarrvrn slrqadkpqf vsafcqtncg dvspntlgaf
      361 cidtglpcdf nhstcngkne lcygrgpgyp defksteiig kkqfkkavel fdkatekleg
      421 kvgyqhayid fsnlqvsvpk agggievvkt cpaamgfgfa agttdgpgaf dfrqgddqgn
      481 afwklvrnll kppgqeqidc qkpkpilldt gemklpydwa psilpvqivr igqlvilsvp
      541 aefttmagrr lrdavktvlt sgrnkqfdsn vhiviagltn tysqyvttfe eyqvqryega
      601 stlygphtln ayiqefkkla aaligggsve pgpqppdlld kqislltpvv ldatplgvnf
      661 gdvkddians tfkrgntvsv tfwsacprnd lmtegtfalv ellqdqktwi pafddddfcl
      721 kfkwsrpakl spqsyatidw ripesvvtgv yrirhfgask slfgsirhft gtssafvve
//
LOCUS       XP_016687836             394 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687836
VERSION     XP_016687836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832347.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..394
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44290
     Region          6..389
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..394
                     /gene="LOC107905651"
                     /coded_by="XM_016832347.2:502..1686"
                     /db_xref="GeneID:107905651"
ORIGIN      
        1 masedptkvs ikllidqess kvivaeagsd ivdilrsllk fplgnvarll gkhqclqrag
       61 clnnlcnsve nlsltsfrtd acksmllnpr siyedeyskk lklymdvsep tgyflcgtyl
      121 ciktgrwfsh fktsrcscge lmdnptdmcl kvgtvaykde segesmffit ddlrvmhglp
      181 gdlmnillnl ginnvcqiee kvvdissnem snllshslfs kttltdvflr kqstmfvqqf
      241 mlvapnvker tekdsktrvk imlrksdrki lygeanedfv dllfsfltip lesalellgg
      301 kgftvgsisn llkdldtifs itkqnsyqdg ilppfyscpi elpsicsqqp tkifhksygy
      361 lkqsdpkspi lekpnsrgyf krkitvsdhr rscs
//
LOCUS       XP_016687835             306 aa            linear   PLN 06-AUG-2024
DEFINITION  probable sugar phosphate/phosphate translocator At5g05820
            [Gossypium hirsutum].
ACCESSION   XP_016687835
VERSION     XP_016687835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="probable sugar phosphate/phosphate translocator
                     At5g05820"
                     /calculated_mol_wt=33552
     Region          16..299
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; cl26744"
                     /db_xref="CDD:474852"
     CDS             1..306
                     /gene="LOC107905650"
                     /coded_by="XM_016832346.2:90..1010"
                     /db_xref="GeneID:107905650"
ORIGIN      
        1 mktmipwtti wivfswygsn igvlllnkyl ltycgfkypi fltmchmlas sllsyvaiaw
       61 lkvvpmqtig skkqfikifg lssvfcfsvv lgnvslrylp vsfnqaigat tpfftavfay
      121 vmmkkteswv tyltllpvva gviiasgaep sfhlfgflmc vsataarask svlqaillss
      181 eeeklnsmnl lmymapiavv illpatllme rnviaitmal arkdtivvyy llfnsslayf
      241 vnltnflvtk htsaltlqvl gnakgavavv vsiiifknpv slmgmlgysl tvvgvllyne
      301 skkgnk
//
LOCUS       XP_016728797             292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728797
VERSION     XP_016728797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..292
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32949
     Region          9..>285
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..292
                     /gene="LOC107939921"
                     /coded_by="XM_016873308.2:203..1081"
                     /db_xref="GeneID:107939921"
ORIGIN      
        1 mafktftasi kllidqernk vllaeagndf idtlrsllkl plgnigllfr knkclltgcl
       61 dnlnnsvenl slnsfrthac krmllyprsi hkdkpvqyft ckkrgcglls yyetsrcscg
      121 klmnseiyle emerdgvkde neggfckves rffitddlrv mkglpgdliq flnklgikdv
      181 nmnavkelei gskeifnlls hsliskttlt dvflrkqgtm lverplligp stkettakdg
      241 ktrvkimerk sdrkilyaea nedfvdllfs lltiplesvl qlvgdryiia gs
//
LOCUS       XP_040943681             247 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At3g47110 [Gossypium
            hirsutum].
ACCESSION   XP_040943681
VERSION     XP_040943681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087747.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..247
                     /product="putative receptor-like protein kinase At3g47110"
                     /calculated_mol_wt=27733
     Region          <1..222
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..247
                     /gene="LOC121203249"
                     /coded_by="XM_041087747.1:126..869"
                     /db_xref="GeneID:121203249"
ORIGIN      
        1 mengsleewl hqsinrnesd ivrnlsffqr vnvaidvaya leylhhqcet tiihcdlkpn
       61 nilldqemvg hisdfglaki lsadrlnyst nqsssiglrg tigyappeyg mgselstkgd
      121 vysygilllk iftgkrptdd mfkeglsihn fveaalpeqv ieitdpillq erarqgtlke
      181 ftlndkhlqh lnsifeiglt csaespterm dmsdvvsklc sirvkllhpt rvhrerqaly
      241 iaqstgt
//
LOCUS       XP_016684714             224 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684714
VERSION     XP_016684714.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684714.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..224
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24841
     Region          <14..191
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..224
                     /gene="LOC107903183"
                     /coded_by="XM_016829225.2:64..738"
                     /db_xref="GeneID:107903183"
ORIGIN      
        1 mfvqqfmlva pnvkertekd sktrvkimlr ksdrkilyge anedfvdllf sflaiplesa
       61 lellggkgft vgsisnllkd ldtifsitkq nsyqdgilpp fyscpielps icsqqptkif
      121 hksygylkqs dpkspilekt nsrgyfkkks lflitddlvv kslssassfs llketgtplc
      181 dveqqvisig evealallra clcsssalsa llnlyvkqpk qepq
//
LOCUS       XP_016728785             112 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L35a-3 [Gossypium hirsutum].
ACCESSION   XP_016728785
VERSION     XP_016728785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873296.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="60S ribosomal protein L35a-3"
                     /calculated_mol_wt=12726
     Region          8..112
                     /region_name="PTZ00041"
                     /note="60S ribosomal protein L35a; Provisional"
                     /db_xref="CDD:240239"
     CDS             1..112
                     /gene="LOC107939907"
                     /coded_by="XM_016873296.2:172..510"
                     /db_xref="GeneID:107939907"
ORIGIN      
        1 mvkgrqgeri rlyvrgailg ykrsksnqyp ntsliqiegv ntkeevgwyc gkrmayiyka
       61 kvkkngshyr ciwgkvtrph gnsgvvrakf ksnlppksmg dkvrvfmyps ni
//
LOCUS       XP_040943683             112 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L35a-3 [Gossypium hirsutum].
ACCESSION   XP_040943683
VERSION     XP_040943683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087749.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="60S ribosomal protein L35a-3"
                     /calculated_mol_wt=12726
     Region          8..112
                     /region_name="PTZ00041"
                     /note="60S ribosomal protein L35a; Provisional"
                     /db_xref="CDD:240239"
     CDS             1..112
                     /gene="LOC107939907"
                     /coded_by="XM_041087749.1:116..454"
                     /db_xref="GeneID:107939907"
ORIGIN      
        1 mvkgrqgeri rlyvrgailg ykrsksnqyp ntsliqiegv ntkeevgwyc gkrmayiyka
       61 kvkkngshyr ciwgkvtrph gnsgvvrakf ksnlppksmg dkvrvfmyps ni
//
LOCUS       XP_040943684             112 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L35a-3 [Gossypium hirsutum].
ACCESSION   XP_040943684
VERSION     XP_040943684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087750.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..112
                     /product="60S ribosomal protein L35a-3"
                     /calculated_mol_wt=12726
     Region          8..112
                     /region_name="PTZ00041"
                     /note="60S ribosomal protein L35a; Provisional"
                     /db_xref="CDD:240239"
     CDS             1..112
                     /gene="LOC107939907"
                     /coded_by="XM_041087750.1:116..454"
                     /db_xref="GeneID:107939907"
ORIGIN      
        1 mvkgrqgeri rlyvrgailg ykrsksnqyp ntsliqiegv ntkeevgwyc gkrmayiyka
       61 kvkkngshyr ciwgkvtrph gnsgvvrakf ksnlppksmg dkvrvfmyps ni
//
LOCUS       XP_016687832             303 aa            linear   PLN 06-AUG-2024
DEFINITION  ataxin-3 homolog [Gossypium hirsutum].
ACCESSION   XP_016687832
VERSION     XP_016687832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..303
                     /product="ataxin-3 homolog"
                     /calculated_mol_wt=33008
     Region          15..168
                     /region_name="Josephin"
                     /note="pfam02099"
                     /db_xref="CDD:460444"
     CDS             1..303
                     /gene="LOC107905647"
                     /coded_by="XM_016832343.2:207..1118"
                     /db_xref="GeneID:107905647"
ORIGIN      
        1 megasnggml yhevqesklc avhcvntvlq gpffsefdla alasdldske rqmmlqgttt
       61 aaagdflsee shnvslggdf siqvlekale vwdlqvipld cpvaepaqid pelenafich
      121 lhdhwfcirk vngewynfds lyaapqhfsk fylsayldsl kgsgwsiflv rgnfpkecpi
      181 ssseasngyg qwlspedaer itkscnltqa ppqrnnmsqq qhterlpsla etdlqmlsdm
      241 ededlraaia aslmdsspat asgessipkt eiaaslmdss patasgessi pktenkdise
      301 kta
//
LOCUS       XP_016687833             227 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3
            [Gossypium hirsutum].
ACCESSION   XP_016687833
VERSION     XP_016687833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..227
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 3"
                     /calculated_mol_wt=25227
     Region          71..227
                     /region_name="OTU_plant_OTU3-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU3 from plants and similar proteins; cd22759"
                     /db_xref="CDD:438596"
     Site            order(84,147,150,157..160,193,195,217,221..223)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438596"
     CDS             1..227
                     /gene="LOC107905648"
                     /coded_by="XM_016832344.2:196..879"
                     /db_xref="GeneID:107905648"
ORIGIN      
        1 manklcneti leqlrhgtak felvsspvss isipslspsl sttfpadnsh rffarigasl
       61 gggsaatkkv eqysvhkvtg dgrclfralv kgmafnkgia lrpqeerdda delrmavkei
      121 lcdsakdrqq yeealiaitv eeslkrycqr iqrpdfwgge sellvlsrlc gqpivvyipe
      181 hehrkggwgf ipiaeygsef rkgfgkgkpk kvvrllysgr nhydllv
//
LOCUS       XP_016687828             683 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA-capping enzyme isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687828
VERSION     XP_016687828.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832339.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687828.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..683
                     /product="mRNA-capping enzyme isoform X1"
                     /calculated_mol_wt=80354
     Region          90..255
                     /region_name="RNA_5'-triphosphatase"
                     /note="RNA 5'-triphosphatase domain; cd14502"
                     /db_xref="CDD:350352"
     Region          350..552
                     /region_name="Adenylation_mRNA_capping"
                     /note="Adenylation domain of GTP-dependent mRNA capping
                     enzymes; cd07895"
                     /db_xref="CDD:185706"
     Site            order(353..355,374,376,381,428,447,504,531,547,549,551)
                     /site_type="active"
                     /db_xref="CDD:185706"
     Site            order(372,443,463..464,466..468,470,500,503,506..507)
                     /site_type="active"
                     /note="CTD docking site [active]"
                     /db_xref="CDD:185706"
     Region          556..650
                     /region_name="mRNA_cap_C"
                     /note="mRNA capping enzyme, C-terminal domain; pfam03919"
                     /db_xref="CDD:461093"
     CDS             1..683
                     /gene="LOC107905646"
                     /coded_by="XM_016832339.2:419..2470"
                     /db_xref="GeneID:107905646"
ORIGIN      
        1 mivgmdlnas plpeddedpy ethiehysap eehvesavei srrereerrk rlrsdrpddr
       61 pvhisqpviy dhfyqnrnst fydksrippg wldcpavgke igciipskvp lgesyndcvp
      121 pgkrysfkqa vhkqevsgrk lglvidltnt sryyqttdlk kkgikhvkiq crgrdavpen
      181 asvntfvyev sqfllrqksn kyilvhcthg hnrtgymiih ylmrtqpmsv tqaikffsea
      241 rppgiykpdy idalyafyhe rrpeslvcpp tpewkrssdl dlngeaavdd ddddddgapt
      301 alpenhetdv mltnddvlgd eiphdqqvqm rqfcyqqlkl ntgvrghaqf pgshpvslnr
      361 dnlqllrqry yyatwkadgt rymmlitidg cylidrsfni rrvqmrfpcw hnkgvggmsh
      421 hltlldgemi idtlpdsrkq erryliydmm vlnnepiier pfyerwkmle kevieprnye
      481 rhniyqgrnp yyrfdlepfr vrrkdfwlls tvnkvlkefi pklsheadgl ifqgwddpyv
      541 prthegllkw kyaqlnsvdf lfeigsddre qlflhergrk klmegntvef revsdhppsf
      601 sgkiiecswd pdrqvwvymr irtdkstpnd intyrkvmqs indniteeil lneineiirl
      661 pmyadrirmd skahlhtnsa rrr
//
LOCUS       XP_016687829             680 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA-capping enzyme isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016687829
VERSION     XP_016687829.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687829.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..680
                     /product="mRNA-capping enzyme isoform X2"
                     /calculated_mol_wt=80039
     Region          90..255
                     /region_name="RNA_5'-triphosphatase"
                     /note="RNA 5'-triphosphatase domain; cd14502"
                     /db_xref="CDD:350352"
     Region          350..552
                     /region_name="Adenylation_mRNA_capping"
                     /note="Adenylation domain of GTP-dependent mRNA capping
                     enzymes; cd07895"
                     /db_xref="CDD:185706"
     Site            order(353..355,374,376,381,428,447,504,531,547,549,551)
                     /site_type="active"
                     /db_xref="CDD:185706"
     Site            order(372,443,463..464,466..468,470,500,503,506..507)
                     /site_type="active"
                     /note="CTD docking site [active]"
                     /db_xref="CDD:185706"
     Region          556..647
                     /region_name="mRNA_cap_C"
                     /note="mRNA capping enzyme, C-terminal domain; pfam03919"
                     /db_xref="CDD:461093"
     CDS             1..680
                     /gene="LOC107905646"
                     /coded_by="XM_016832340.2:419..2461"
                     /db_xref="GeneID:107905646"
ORIGIN      
        1 mivgmdlnas plpeddedpy ethiehysap eehvesavei srrereerrk rlrsdrpddr
       61 pvhisqpviy dhfyqnrnst fydksrippg wldcpavgke igciipskvp lgesyndcvp
      121 pgkrysfkqa vhkqevsgrk lglvidltnt sryyqttdlk kkgikhvkiq crgrdavpen
      181 asvntfvyev sqfllrqksn kyilvhcthg hnrtgymiih ylmrtqpmsv tqaikffsea
      241 rppgiykpdy idalyafyhe rrpeslvcpp tpewkrssdl dlngeaavdd ddddddgapt
      301 alpenhetdv mltnddvlgd eiphdqqvqm rqfcyqqlkl ntgvrghaqf pgshpvslnr
      361 dnlqllrqry yyatwkadgt rymmlitidg cylidrsfni rrvqmrfpcw hnkgvggmsh
      421 hltlldgemi idtlpdsrkq erryliydmm vlnnepiier pfyerwkmle kevieprnye
      481 rhniyqgrnp yyrfdlepfr vrrkdfwlls tvnkvlkefi pklsheadgl ifqgwddpyv
      541 prthegllkw kyaqlnsvdf lfeigsddre qlflhergrk klmegntvef rdhppsfsgk
      601 iiecswdpdr qvwvymrirt dkstpndint yrkvmqsind niteeillne ineiirlpmy
      661 adrirmdska hlhtnsarrr
//
LOCUS       XP_016687830             668 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA-capping enzyme isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016687830
VERSION     XP_016687830.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687830.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..668
                     /product="mRNA-capping enzyme isoform X3"
                     /calculated_mol_wt=78409
     Region          90..255
                     /region_name="RNA_5'-triphosphatase"
                     /note="RNA 5'-triphosphatase domain; cd14502"
                     /db_xref="CDD:350352"
     Region          350..552
                     /region_name="Adenylation_mRNA_capping"
                     /note="Adenylation domain of GTP-dependent mRNA capping
                     enzymes; cd07895"
                     /db_xref="CDD:185706"
     Site            order(353..355,374,376,381,428,447,504,531,547,549,551)
                     /site_type="active"
                     /db_xref="CDD:185706"
     Site            order(372,443,463..464,466..468,470,500,503,506..507)
                     /site_type="active"
                     /note="CTD docking site [active]"
                     /db_xref="CDD:185706"
     Region          556..636
                     /region_name="mRNA_cap_C"
                     /note="mRNA capping enzyme, C-terminal domain; pfam03919"
                     /db_xref="CDD:461093"
     CDS             1..668
                     /gene="LOC107905646"
                     /coded_by="XM_016832341.2:419..2425"
                     /db_xref="GeneID:107905646"
ORIGIN      
        1 mivgmdlnas plpeddedpy ethiehysap eehvesavei srrereerrk rlrsdrpddr
       61 pvhisqpviy dhfyqnrnst fydksrippg wldcpavgke igciipskvp lgesyndcvp
      121 pgkrysfkqa vhkqevsgrk lglvidltnt sryyqttdlk kkgikhvkiq crgrdavpen
      181 asvntfvyev sqfllrqksn kyilvhcthg hnrtgymiih ylmrtqpmsv tqaikffsea
      241 rppgiykpdy idalyafyhe rrpeslvcpp tpewkrssdl dlngeaavdd ddddddgapt
      301 alpenhetdv mltnddvlgd eiphdqqvqm rqfcyqqlkl ntgvrghaqf pgshpvslnr
      361 dnlqllrqry yyatwkadgt rymmlitidg cylidrsfni rrvqmrfpcw hnkgvggmsh
      421 hltlldgemi idtlpdsrkq erryliydmm vlnnepiier pfyerwkmle kevieprnye
      481 rhniyqgrnp yyrfdlepfr vrrkdfwlls tvnkvlkefi pklsheadgl ifqgwddpyv
      541 prthegllkw kyaqlnsvdf lfeigsddre qlflhergrk klmegntvef revsdhppsf
      601 sgkiiecswd pdrqvwvymr irtdkstpnd intyrknkdg qqgppaykfs ttevtdianw
      661 llcsrsry
//
LOCUS       XP_040943685             665 aa            linear   PLN 06-AUG-2024
DEFINITION  mRNA-capping enzyme isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943685
VERSION     XP_040943685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087751.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..665
                     /product="mRNA-capping enzyme isoform X4"
                     /calculated_mol_wt=78094
     Region          90..255
                     /region_name="RNA_5'-triphosphatase"
                     /note="RNA 5'-triphosphatase domain; cd14502"
                     /db_xref="CDD:350352"
     Region          350..552
                     /region_name="Adenylation_mRNA_capping"
                     /note="Adenylation domain of GTP-dependent mRNA capping
                     enzymes; cd07895"
                     /db_xref="CDD:185706"
     Site            order(353..355,374,376,381,428,447,504,531,547,549,551)
                     /site_type="active"
                     /db_xref="CDD:185706"
     Site            order(372,443,463..464,466..468,470,500,503,506..507)
                     /site_type="active"
                     /note="CTD docking site [active]"
                     /db_xref="CDD:185706"
     Region          556..633
                     /region_name="mRNA_cap_C"
                     /note="mRNA capping enzyme, C-terminal domain; pfam03919"
                     /db_xref="CDD:461093"
     CDS             1..665
                     /gene="LOC107905646"
                     /coded_by="XM_041087751.1:419..2416"
                     /db_xref="GeneID:107905646"
ORIGIN      
        1 mivgmdlnas plpeddedpy ethiehysap eehvesavei srrereerrk rlrsdrpddr
       61 pvhisqpviy dhfyqnrnst fydksrippg wldcpavgke igciipskvp lgesyndcvp
      121 pgkrysfkqa vhkqevsgrk lglvidltnt sryyqttdlk kkgikhvkiq crgrdavpen
      181 asvntfvyev sqfllrqksn kyilvhcthg hnrtgymiih ylmrtqpmsv tqaikffsea
      241 rppgiykpdy idalyafyhe rrpeslvcpp tpewkrssdl dlngeaavdd ddddddgapt
      301 alpenhetdv mltnddvlgd eiphdqqvqm rqfcyqqlkl ntgvrghaqf pgshpvslnr
      361 dnlqllrqry yyatwkadgt rymmlitidg cylidrsfni rrvqmrfpcw hnkgvggmsh
      421 hltlldgemi idtlpdsrkq erryliydmm vlnnepiier pfyerwkmle kevieprnye
      481 rhniyqgrnp yyrfdlepfr vrrkdfwlls tvnkvlkefi pklsheadgl ifqgwddpyv
      541 prthegllkw kyaqlnsvdf lfeigsddre qlflhergrk klmegntvef rdhppsfsgk
      601 iiecswdpdr qvwvymrirt dkstpndint yrknkdgqqg ppaykfstte vtdianwllc
      661 srsry
//
LOCUS       XP_016687827             463 aa            linear   PLN 06-AUG-2024
DEFINITION  protein OCTOPUS [Gossypium hirsutum].
ACCESSION   XP_016687827
VERSION     XP_016687827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..463
                     /product="protein OCTOPUS"
                     /calculated_mol_wt=51134
     Region          17..430
                     /region_name="DUF740"
                     /note="Protein of unknown function (DUF740); pfam05340"
                     /db_xref="CDD:398811"
     CDS             1..463
                     /gene="LOC107905645"
                     /coded_by="XM_016832338.2:248..1639"
                     /db_xref="GeneID:107905645"
ORIGIN      
        1 mnptadppls qpqppphrpc drhpeesftt fcpsclcerl aflqpastss ssgkppiaps
       61 tttaaafkai fkppggngsr ssflpelrrt ksfsaskneg tnlgfepqrk scslfsqeis
      121 dlgsssiktp tenddvqive eeeqlkamkd hmdldsqtkk kttfwstasv fskklqqwrq
      181 kqklkkpkng dngsvrlple nplgrrscdi apprfsfdds rfsfdepras wdgylmgrtt
      241 tpfpkvpiat mvedhpltmd singeslpgg saqtrdyysd srrrksldrs nsirktaaav
      301 vaeidelksi stakvspaiv dsnsnsnset feissfkdna siimngdrtk eskkwstkaw
      361 nilgfihrkn vnknededny srasgversy sysesvsepr lgfnpklmrs sssvswrnls
      421 rfgvesngrl mfdtmsggvg sgrkggsgkc rgnhahpvpk rly
//
LOCUS       XP_016687826             590 aa            linear   PLN 06-AUG-2024
DEFINITION  probably inactive leucine-rich repeat receptor-like protein kinase
            At5g48380 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016687826
VERSION     XP_016687826.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016687826.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..590
                     /product="probably inactive leucine-rich repeat
                     receptor-like protein kinase At5g48380 isoform X1"
                     /calculated_mol_wt=67223
     Region          16..>201
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          101..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..173
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..583
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(326..329,332,334,346,348,376,392..395,443,447..448,
                     450,460..461)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..590
                     /gene="LOC107905643"
                     /coded_by="XM_016832337.2:296..2068"
                     /db_xref="GeneID:107905643"
ORIGIN      
        1 memapntrlv lhafswslla aisicspndi aclksirasl ddphdyfkss wnfnnytegf
       61 icnfvgiecw hpddnevlni rltnmglkgq fplgivkcqr lmrldlsnnq lsgpipsnis
      121 klfrfgtaid issnrfsgni pkrianctfl nslnlsnnql tgfippelil lhrmknfsva
      181 nnqlygpvpl fnlslskdsf vgnpglcgkp lepcidhkss pfkngfitgy avsvvsviti
      241 fmfyfapcmh rnqrnkllrh filnliwnrt rkvnmtqnsh qtsqmvlpdi lhetsretsm
      301 lvelvsrmsy sdlyeatnef saeniighgq mgttykatss ngcllaikrl fdtqkfdehf
      361 itelktlgrl rhdnlipllg fcieskekll vykymsngnl ydllhplekr tigwplrlki
      421 acgvakglvw lhqncnykvi hldicsrcil ldqnfepkis nfseamlmks nnrywsssfd
      481 mdrefwessf vkedvyrfgi lvlelisrke pseltdlart gdesigkwvv ddvkssdfvd
      541 gglvrhgfdv eifeilrvaw ncvqpnpder pamlqvhkii ngfskkygyg
//
LOCUS       XP_040943687             561 aa            linear   PLN 06-AUG-2024
DEFINITION  probably inactive leucine-rich repeat receptor-like protein kinase
            At5g48380 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943687
VERSION     XP_040943687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087753.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..561
                     /product="probably inactive leucine-rich repeat
                     receptor-like protein kinase At5g48380 isoform X2"
                     /calculated_mol_wt=64083
     Region          26..70
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <82..233
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          297..554
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(297..300,303,305,317,319,347,363..366,414,418..419,
                     421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..561
                     /gene="LOC107905643"
                     /coded_by="XM_041087753.1:293..1978"
                     /db_xref="GeneID:107905643"
ORIGIN      
        1 memapntrlv lhafswslla aisicspndi aclksirasl ddphdyfkss wnfnnytegf
       61 icnfvgiecw hpddnevlni rltnmglkgq fplgivkcqr lmrldlsnnq lsgpipsnis
      121 klfrfgtaid issnrfseli llhrmknfsv annqlygpvp lfnlslskds fvgnpglcgk
      181 plepcidhks spfkngfitg yavsvvsvit ifmfyfapcm hrnqrnkllr hfilnliwnr
      241 trkvnmtqns hqtsqmvlpd ilhetsrets mlvelvsrms ysdlyeatne fsaeniighg
      301 qmgttykats sngcllaikr lfdtqkfdeh fitelktlgr lrhdnlipll gfcieskekl
      361 lvykymsngn lydllhplek rtigwplrlk iacgvakglv wlhqncnykv ihldicsrci
      421 lldqnfepki snfseamlmk snnrywsssf dmdrefwess fvkedvyrfg ilvlelisrk
      481 epseltdlar tgdesigkwv vddvkssdfv dgglvrhgfd veifeilrva wncvqpnpde
      541 rpamlqvhki ingfskkygy g
//
LOCUS       XP_016684291             590 aa            linear   PLN 06-AUG-2024
DEFINITION  probably inactive leucine-rich repeat receptor-like protein kinase
            At5g48380 [Gossypium hirsutum].
ACCESSION   XP_016684291
VERSION     XP_016684291.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828802.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684291.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..590
                     /product="probably inactive leucine-rich repeat
                     receptor-like protein kinase At5g48380"
                     /calculated_mol_wt=67123
     Region          16..>201
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          101..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          126..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..173
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..583
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(326..329,332,334,346,348,376,392..395,443,447..448,
                     450,460..461)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..590
                     /gene="LOC107902665"
                     /coded_by="XM_016828802.2:82..1854"
                     /db_xref="GeneID:107902665"
ORIGIN      
        1 memapntrlv lhafswslla aisicspndi aclksirasl ddphdyfkss wnfnnyregf
       61 icnfvgiecw haddnevlni rltnmglkgq fplgivkckr lmrldlsnnq lsgpipsnis
      121 elfpfgtaid issnrfsgni pkrisnctfl nslnlsnnql tgfippelil lhrmknfsva
      181 nnqlygpvpl fnlslskdsf vgnpglcgkp lepcidhkss pfkngfitgy avsvvsviti
      241 fmfyfapcmh rnqrnkllrh filnliwnrt rkvnmtqnsh qtsqmvlpdi lhetsretsm
      301 lvelvsrmsy sdlyeatnef saeniighgq mgttykatss ngcllaikrl fdtqkfdehf
      361 itelktlgrl rhdnlipllg fcieskekll vykymsngnl ydllhplekr tigwplrlki
      421 acgvakglvw lhqncnykvi hldicsrcil ldqnfepkis nfseamliks nnrywsssfd
      481 mdsefwessf vkedvyrfgi lvlelisrke pseltdlart gdesigkwvv ddvkssdfvd
      541 gglvrhgfdv eifeilrvaw ncvqpnpder pamlqvhkii ngfskkygyg
//
LOCUS       XP_040943688             695 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g09060 [Gossypium
            hirsutum].
ACCESSION   XP_040943688
VERSION     XP_040943688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087754.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..695
                     /product="pentatricopeptide repeat-containing protein
                     At3g09060"
                     /calculated_mol_wt=78343
     Region          83..124
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          83..108
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          112..161
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          116..143
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <146..>580
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          151..178
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          186..213
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          221..248
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          257..284
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          290..319
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          325..354
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          359..388
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          388..419
                     /region_name="PPR_1"
                     /note="PPR repeat; pfam12854"
                     /db_xref="CDD:403914"
     Region          394..419
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          432..458
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          466..493
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          501..528
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          534..563
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          567..616
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          569..598
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          603..650
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          604..633
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          637..683
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          639..668
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..695
                     /gene="LOC107905641"
                     /coded_by="XM_041087754.1:143..2230"
                     /db_xref="GeneID:107905641"
ORIGIN      
        1 mtnfpqnlsp krllkllkse tnpysalalf dsatghpgyt hspdvfhhil rrlidsrlvs
       61 hvtrivqlie sqkcncpedv altvikayak nsmpdkalds fqrmkqvfgc epgirsyntl
      121 lnafvesnrw deaesffkyf etvsmepnlq tynilikvac kkkqfkqake ildcmwktgf
      181 qpnvqsygsl isgfvkggnl vvamevfdem ferkvipdvm cynilidgff knrdfvkane
      241 vwerlledss aypnsvtynv minglckcgk fdeclsiwer mkknerekdl ftyssmihgl
      301 ceagnidgae rvykdmveng vmidvvtyna mlngycksrk ikdsselwkl mkkegcinvv
      361 sfnifirgll engkvdeais lwgnlpqrgc cadastygvl ihglcrngyl rkaldilqeg
      421 elgegkvdsf gyssmidglg kqgrldevag licrmvkcgh klnpyvynpl iqafiqasrl
      481 ddavrffkgv dsmgcspsvv synilisglc kadrfreays ilkemlekgw kpdmityssl
      541 mkglfrgknv emalglwnhv ldkalkpdvt mhnivihglc svgkvedalq lyskmrqrnr
      601 atnlvtynti mkglyktgey ekaseiwtqi ssdglqpdii synitlkglc scgkildaig
      661 flddalergi lptiitwnil vravlttgfk mavsi
//
LOCUS       XP_016687824             695 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g09060 [Gossypium
            hirsutum].
ACCESSION   XP_016687824
VERSION     XP_016687824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..695
                     /product="pentatricopeptide repeat-containing protein
                     At3g09060"
                     /calculated_mol_wt=78343
     Region          83..124
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          83..108
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          112..161
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          116..143
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <146..>580
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          151..178
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          186..213
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          221..248
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          257..284
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          290..319
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          325..354
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          359..388
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          388..419
                     /region_name="PPR_1"
                     /note="PPR repeat; pfam12854"
                     /db_xref="CDD:403914"
     Region          394..419
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          432..458
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          466..493
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          501..528
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          534..563
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          567..616
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          569..598
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          603..650
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          604..633
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          637..683
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          639..668
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..695
                     /gene="LOC107905641"
                     /coded_by="XM_016832335.2:143..2230"
                     /db_xref="GeneID:107905641"
ORIGIN      
        1 mtnfpqnlsp krllkllkse tnpysalalf dsatghpgyt hspdvfhhil rrlidsrlvs
       61 hvtrivqlie sqkcncpedv altvikayak nsmpdkalds fqrmkqvfgc epgirsyntl
      121 lnafvesnrw deaesffkyf etvsmepnlq tynilikvac kkkqfkqake ildcmwktgf
      181 qpnvqsygsl isgfvkggnl vvamevfdem ferkvipdvm cynilidgff knrdfvkane
      241 vwerlledss aypnsvtynv minglckcgk fdeclsiwer mkknerekdl ftyssmihgl
      301 ceagnidgae rvykdmveng vmidvvtyna mlngycksrk ikdsselwkl mkkegcinvv
      361 sfnifirgll engkvdeais lwgnlpqrgc cadastygvl ihglcrngyl rkaldilqeg
      421 elgegkvdsf gyssmidglg kqgrldevag licrmvkcgh klnpyvynpl iqafiqasrl
      481 ddavrffkgv dsmgcspsvv synilisglc kadrfreays ilkemlekgw kpdmityssl
      541 mkglfrgknv emalglwnhv ldkalkpdvt mhnivihglc svgkvedalq lyskmrqrnr
      601 atnlvtynti mkglyktgey ekaseiwtqi ssdglqpdii synitlkglc scgkildaig
      661 flddalergi lptiitwnil vravlttgfk mavsi
//
LOCUS       XP_016687825             256 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016687825
VERSION     XP_016687825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016832336.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29067
     Region          56..>156
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..256
                     /gene="LOC107905642"
                     /coded_by="XM_016832336.2:3..773"
                     /db_xref="GeneID:107905642"
ORIGIN      
        1 mmialkaiqa sftyssnhvf fqtrrittyt knpilclsks ndsesdsdpe pegdtrkqdl
       61 laqiamlqaq kvrltdyldk rsayltqfae eanaefdkvg edalkgleea serimenies
      121 qmqafkesqe lnrqeiemne dqlaefedqm ekerneglff knltekkpid takameeaek
      181 vkevtkekvg skarrnlyla litvlavgia dslvtgsdwr kvavlgailv alfsqfiyeh
      241 tvlseeekte kndenk
//
LOCUS       XP_040943690             558 aa            linear   PLN 06-AUG-2024
DEFINITION  laccase-4 [Gossypium hirsutum].
ACCESSION   XP_040943690
VERSION     XP_040943690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087756.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..558
                     /product="laccase-4"
                     /calculated_mol_wt=61114
     Region          24..558
                     /region_name="laccase"
                     /note="plant; TIGR03389"
                     /db_xref="CDD:274556"
     CDS             1..558
                     /gene="LOC107892568"
                     /coded_by="XM_041087756.1:62..1738"
                     /db_xref="GeneID:107892568"
ORIGIN      
        1 messtirilv ivaiihfpvl idsavrqykf dvvmknatml cstkpivtvn gmfpgptlya
       61 veddtvlinv vnhvnynvti hwhgirqlrt gwadgpayit qcpittgqsy iynftitgqr
      121 gtllwhahil wlrstvhgai vilpkccvpy pfpkpdkevv vvlaewwksd tedvineaik
      181 sglapnvsda htinglpgpv sdcpsqggft lhvekgktyl lrlinaalne elffkiaghh
      241 lsivevdaty vkpfktdtvl ispgqttnvl lfadqkqgny lvtvspfmda piavdnitat
      301 atlnyvgtlt ntptilttpp lenattvatn fvnslrslns kqfpasvprt vdynlyftvg
      361 lglnpcptck pgngsrvvas innltftlpt tallqahyfn ingvfttdfp anppyvfnyt
      421 gtppsnlqtm ngtkvfrlay nanvqlvlqg tgiiapenhp ihlhgfsfya vgrgpgnynp
      481 mtdpmkfnlv dpierntigv psggwvairf radnpgvwfl hchlevhttw glkmaflvdn
      541 grgpnqsllp ppidlpkc
//
LOCUS       XP_016671897             295 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor DIVARICATA [Gossypium hirsutum].
ACCESSION   XP_016671897
VERSION     XP_016671897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816408.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..295
                     /product="transcription factor DIVARICATA"
                     /calculated_mol_wt=33174
     Region          28..74
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(29,62..63,65..66,68..70,72..74)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          132..184
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Site            order(137,168..169,171..172,174..176,178..180)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..295
                     /gene="LOC107891567"
                     /coded_by="XM_016816408.2:672..1559"
                     /db_xref="GeneID:107891567"
ORIGIN      
        1 mnrgleilsp asflqtsnwl fqeskgtkwt pqenkcfena lalydkdtpd rwfkvaamip
       61 gktvgdvikq yreleedvsd ieaglipipg yssdsftlew vndgqvfdgf rnyyytpggk
      121 rgtgtrpdqe rkkgvpwtee ehrqflmglk kygkgdwrni srnfvttrtp tqvashaqky
      181 firqvtggkd krrssihdit tvnipdtiss spdqskplsp snsstvmqpq qqpnatsvtk
      241 eildfewnqr negaaivfdq tssgnallsp ycgmissygp qfgsynalfq smqhp
//
LOCUS       XP_016671896             516 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfoquinovosyl transferase SQD2 [Gossypium hirsutum].
ACCESSION   XP_016671896
VERSION     XP_016671896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816407.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..516
                     /product="sulfoquinovosyl transferase SQD2"
                     /calculated_mol_wt=57859
     Region          79..514
                     /region_name="PLN02871"
                     /note="UDP-sulfoquinovose:DAG sulfoquinovosyltransferase"
                     /db_xref="CDD:215469"
     CDS             1..516
                     /gene="LOC107891566"
                     /coded_by="XM_016816407.2:420..1970"
                     /db_xref="GeneID:107891566"
ORIGIN      
        1 mssslsinph lsshplfvyp ssssnscsss nlilpnsikv lpfssfsktp islngkkrcf
       61 sqslrlkter krrvtvvkas elsvaevked dgedenppli dsennskprr ialfvepspf
      121 syvsgyknrf qnfikylrem gdevmvvtth egvptefyga kligsrsfpc pwyqkvplsl
      181 alspriisev arfkpdiiha sspgimvfga liiakllcvp ivmsyhthvp vyiprytfsw
      241 lvkpmwlvlk flhraadltl vpsvaiakdl raarvtaank irlwnkgvds esfhpgyrsh
      301 emrlrlsnge perpliihvg rlgveksldf lksvmdrlpe ariafigdgp yredleklfs
      361 gmpvvftgtl qgeelsqaya sgdvfvmpse setlglvvle amssgipvvg araggipdii
      421 padqegktgf lfnpgdlddc lsklepllqn kemretigka arqemekydw raatkkirne
      481 qyntaiwfwr kkraqllrpl qwlakrvfps pkishr
//
LOCUS       XP_016671895             252 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 6 [Gossypium
            hirsutum].
ACCESSION   XP_016671895
VERSION     XP_016671895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816406.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..252
                     /product="mediator of RNA polymerase II transcription
                     subunit 6"
                     /calculated_mol_wt=28062
     Region          30..155
                     /region_name="Med6"
                     /note="MED6 mediator sub complex component; pfam04934"
                     /db_xref="CDD:461490"
     CDS             1..252
                     /gene="LOC107891565"
                     /coded_by="XM_016816406.2:194..952"
                     /db_xref="GeneID:107891565"
ORIGIN      
        1 matppvaagg nfeasppppm qppgtdmtgi cfrdqlwlnt ypldrnlvfd yfalspfydw
       61 tcnneqlrmr sihpldlsql skmtgmeyml sevmephlfv irkqkrdsae kvtpmlayyi
      121 ldgsiyqapq lcnvfaarvg ralyyiskaf ttaaskleki gyvdtenese tvepkggkea
      181 inikevkrvd hilaslqrkl ppaplpppfp dgfvppstae aekdpenqqt aepqpsavdp
      241 iidqgpakrm kf
//
LOCUS       XP_016671894             308 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 7 homolog A [Gossypium
            hirsutum].
ACCESSION   XP_016671894
VERSION     XP_016671894.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016671894.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..308
                     /product="26S proteasome non-ATPase regulatory subunit 7
                     homolog A"
                     /calculated_mol_wt=34934
     Region          10..307
                     /region_name="PLN03246"
                     /note="26S proteasome regulatory subunit; Provisional"
                     /db_xref="CDD:215645"
     CDS             1..308
                     /gene="LOC107891564"
                     /coded_by="XM_016816405.2:135..1061"
                     /db_xref="GeneID:107891564"
ORIGIN      
        1 mdviktqqis srpiekvivh plvllsivdn ynrvakdtrk rvvgvllgss fkgtvdvsns
       61 yavpfeedek dpsiwfldhn yhesmfsmfk rinakehvvg wystgpklre ndldihrlfh
      121 nyvpnpvlvi idvqpkelgi pskayydvee vkenatqksq kifvhvpsei aaheveeigv
      181 ehllrdvkdt tistlatevt gkltalkgld arlkeirsyl dlvideklpl nheilyhlqd
      241 vfnllpnlnv ndlikafavk tndmmlviyl sslirsvial hnlinnkmln kehekaedar
      301 pttvpats
//
LOCUS       XP_016671893             483 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin transporter-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016671893
VERSION     XP_016671893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..483
                     /product="auxin transporter-like protein 2"
                     /calculated_mol_wt=54380
     Region          1..474
                     /region_name="PLN03074"
                     /note="auxin influx permease; Provisional"
                     /db_xref="CDD:215559"
     CDS             1..483
                     /gene="LOC107891563"
                     /coded_by="XM_016816404.2:382..1833"
                     /db_xref="GeneID:107891563"
ORIGIN      
        1 mlgqkqseea ivsnyneseq rhvenrdeek eeenqslfnv knllwhggsa wdawfscasn
       61 qvaqvlltlp ysfsqlgmls gillqvfygi igswtaylis vlyieyrsrk ekenvnfknh
      121 viqwfevldg llgpywkalg lafnctfllf gsviqligca sniyyvndkl dkrtwtyifg
      181 accattvfip sfhnyriwsf lglgmttyta wylaiaalvh gqaegvthsg ptklvlyftg
      241 atnilytfgg havtveimha mwkpqkfkyi yllatlyvft ltlpsaaavy wafgdellnh
      301 snafsllpkn gfrdaavilm lihqfitfgf actplyfvwe kvigmhdtks iclralarlp
      361 vvipiwflai ifpffgpins avgallvsft vyiipalahm ltyrkasarq naaekppffm
      421 pswtgmyaln afivvwvlvi gfgfggwasm tnfirqidsf glfakcyqck pptptspaaa
      481 mhh
//
LOCUS       XP_016671892             121 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S31, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016671892
VERSION     XP_016671892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816403.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..121
                     /product="30S ribosomal protein S31, chloroplastic"
                     /calculated_mol_wt=12847
     Region          1..88
                     /region_name="RPS31"
                     /note="Ribosomal protein S31e; cl27771"
                     /db_xref="CDD:332592"
     CDS             1..121
                     /gene="LOC107891562"
                     /coded_by="XM_016816403.2:107..472"
                     /db_xref="GeneID:107891562"
ORIGIN      
        1 maslllgaap isaqslnlss vsrissshsq tlgtslsvsn ssfslsaass psipyvycgr
       61 gdkktergkr fnhsfgnarp rdkkkgrgpp rvavppappr kdkfdddeki kieideslft
      121 s
//
LOCUS       XP_016749195             227 aa            linear   PLN 06-AUG-2024
DEFINITION  ran-binding protein 1 homolog b [Gossypium hirsutum].
ACCESSION   XP_016749195
VERSION     XP_016749195.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893706.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016749195.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..227
                     /product="ran-binding protein 1 homolog b"
                     /calculated_mol_wt=24842
     Region          31..164
                     /region_name="RanBD_RanBP1"
                     /note="Ran-binding domain; cd13179"
                     /db_xref="CDD:270000"
     Site            order(42..43,45..48,61,63,65,72..75,92,94,96..97,99..103,
                     106..108,116..119,126,128,132,135,137,141,145)
                     /site_type="other"
                     /note="Ran#RanBP1#RanGAP complex [polypeptide binding]"
                     /db_xref="CDD:270000"
     Site            order(42..43,46..48,57,63,65,70..75,79,90,92,94,96..103,
                     106..108,116..119,122..124,126,128,132,139,141,143,145)
                     /site_type="other"
                     /note="CRM1-RanBP1-RanGTP complex [polypeptide binding]"
                     /db_xref="CDD:270000"
     CDS             1..227
                     /gene="LOC107958051"
                     /coded_by="XM_016893706.2:108..791"
                     /db_xref="GeneID:107958051"
ORIGIN      
        1 matdakadpe phcredddna pataaddedt gaqvapivkl eevavatgee dedpildlka
       61 klyrfdkegn qwkergvgnv kllkhkvngk vrlvmrqskt lkicanhfvi ptmtvqehsg
      121 ndkscvwhaa dfadgnlkee mfcirfasve ncktfmetvq dvaesqgkke enkdatvtad
      181 lldklsvges ksdgkeedtv vasdtkeavk deakteedkk deaaska
//
LOCUS       XP_040943692            1010 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: importin-11 [Gossypium hirsutum].
ACCESSION   XP_040943692
VERSION     XP_040943692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087758.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1010
                     /product="LOW QUALITY PROTEIN: importin-11"
                     /calculated_mol_wt=114233
     Region          7..>729
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..1010
                     /gene="LOC107891557"
                     /coded_by="XM_041087758.1:342..3374"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:107891557"
ORIGIN      
        1 malsvsdlsa iysllansms qdesnrkpae sdlaqsesrp gfcsclmevi takdlasqvd
       61 irlmasvyfk nsinrywrkr rdfsgisnee kqhlkqklls hlreenyqia qmlavliski
      121 arfdypxewp elfsflaqql psadvltshr ifmilfrtlk elstkrltad qrnfaeissh
      181 lykycwhiwq sdlqtishgf siitqsynsn dkeerhddly ltcerwlfcl kiicqlvisg
      241 fqsdakciqe irpvkevspv llnaaqsflp yytslqnrhp kfwefikrac tklmkvlvai
      301 qqrhpysfgd icvlqpvlnf clnkitdpep dilsfeqfli kcmvmaksvf eckeykpsvt
      361 grvmdengvt leqmkknisn avagvltrll pnerivllcn vlirryfvlt tsdleewyen
      421 pexfhheqdm vqwteklrpc aealyivlfe nhsqllapiv vsilqeamng cptstteitp
      481 glllkdaayg aaayvyydls nylsfrdwfn galslelsnd hpnmriihrk valilgqwvs
      541 eikddtkrav ycalirllqd kdlsvrlaac rslclhveda nfserdfsdl lpvcwdscfk
      601 lvkevqefds kvqvlnlisv llghvnevip yasnlmqffq mvweessges llriqllial
      661 rnfvialgyq spscysmllp ilqkgiding pdelnlleds mllweatlsh vpamvpqlla
      721 yfpclleile rnfdhlqvav diiedyiilg greflsmhss svaklldliv gnvndrglls
      781 ilpiidilil cfpmevppli sstlqklvvi clsgddgdpf ktavkassaa iiarilvmnt
      841 nylaqltsep slssvlqqtg vaiednills lvdvwldkvd nvslphkkaf glalsiiltl
      901 rlpqvldkld qilsvctsvi lggtddltee essgdnmsyg rshdedllps kelrrrqikv
      961 sdpinrlsle nsvrdnlqtc aalhgesfns aiakihpaaf aqlkqalkmp
//
LOCUS       XP_016671888             393 aa            linear   PLN 06-AUG-2024
DEFINITION  ERBB-3 BINDING PROTEIN 1 [Gossypium hirsutum].
ACCESSION   XP_016671888
VERSION     XP_016671888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="ERBB-3 BINDING PROTEIN 1"
                     /calculated_mol_wt=42901
     Region          2..385
                     /region_name="APP_MetAP"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; cl00279"
                     /db_xref="CDD:469704"
     Site            order(90,110,121,230,299,316)
                     /site_type="active"
                     /db_xref="CDD:238522"
     CDS             1..393
                     /gene="LOC107891559"
                     /coded_by="XM_016816399.2:204..1385"
                     /db_xref="GeneID:107891559"
ORIGIN      
        1 msddereeke ldlsssevvt kykgaaeivn kalqlvvkec kpkakivdic ekgdafireq
       61 tgnmyknskk kiergvafpt clsvnntvch fsplasdtse leegdmvkid mgchidgfia
      121 vvahthvvqs gpitgkqadv vaaantaaev alrlvrpgkk nkdvsdaiqk vaaaydckiv
      181 egvlshqlkq fvidgnkvil svsnpdtrvd daefeenevy avdivastge gkpklldekq
      241 ttiykravdk nyhlkmkasr fifseinqrf pilpfttral eekrarlglv ecvnhdllqp
      301 ypvlyekpgd yvahikftvl lmpngsdrit shplqelqst ktiddpeika wlalgtktkk
      361 kgggkkkkgk kgdkaeggae geamdastng gas
//
LOCUS       XP_016749197             393 aa            linear   PLN 06-AUG-2024
DEFINITION  ERBB-3 BINDING PROTEIN 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016749197
VERSION     XP_016749197.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016893708.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016749197.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="ERBB-3 BINDING PROTEIN 1 isoform X1"
                     /calculated_mol_wt=42872
     Region          2..385
                     /region_name="APP_MetAP"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; cl00279"
                     /db_xref="CDD:469704"
     Site            order(90,110,121,230,299,316)
                     /site_type="active"
                     /db_xref="CDD:238522"
     CDS             1..393
                     /gene="LOC107958052"
                     /coded_by="XM_016893708.2:193..1374"
                     /db_xref="GeneID:107958052"
ORIGIN      
        1 msddereeke ldltssevvt kyksaaaivs kalqlvvkec kpkakivdic ekgdafireq
       61 tgnmyknskk kiergvafpt clsvnntvch fsplasdtse leegdmvkid mgchidgfia
      121 vvahthvvqs gpitgkqadv vaaantaaev alrlvrpgkk nkdvsdaiqk vaaaydckiv
      181 egvlshqlkq fvidgnkvil svsnpdtrvd daefeeneay avdivastge gkpklldekq
      241 ttifkravdk nyhlkmkasr fifseinqrf pilpftaral eekrarlglv ecvnhdllqp
      301 ypvlyekpgd yvahikftvl lmpngsdrit shplqelqpt kmiddpeika wlalgtktkk
      361 kgggkkkkgk kgdkaeggae geamdastnc gas
//
LOCUS       XP_040943694             393 aa            linear   PLN 06-AUG-2024
DEFINITION  ERBB-3 BINDING PROTEIN 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943694
VERSION     XP_040943694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087760.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="ERBB-3 BINDING PROTEIN 1 isoform X1"
                     /calculated_mol_wt=42872
     Region          2..385
                     /region_name="APP_MetAP"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; cl00279"
                     /db_xref="CDD:469704"
     Site            order(90,110,121,230,299,316)
                     /site_type="active"
                     /db_xref="CDD:238522"
     CDS             1..393
                     /gene="LOC107958052"
                     /coded_by="XM_041087760.1:209..1390"
                     /db_xref="GeneID:107958052"
ORIGIN      
        1 msddereeke ldltssevvt kyksaaaivs kalqlvvkec kpkakivdic ekgdafireq
       61 tgnmyknskk kiergvafpt clsvnntvch fsplasdtse leegdmvkid mgchidgfia
      121 vvahthvvqs gpitgkqadv vaaantaaev alrlvrpgkk nkdvsdaiqk vaaaydckiv
      181 egvlshqlkq fvidgnkvil svsnpdtrvd daefeeneay avdivastge gkpklldekq
      241 ttifkravdk nyhlkmkasr fifseinqrf pilpftaral eekrarlglv ecvnhdllqp
      301 ypvlyekpgd yvahikftvl lmpngsdrit shplqelqpt kmiddpeika wlalgtktkk
      361 kgggkkkkgk kgdkaeggae geamdastnc gas
//
LOCUS       XP_040943695             330 aa            linear   PLN 06-AUG-2024
DEFINITION  ERBB-3 BINDING PROTEIN 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943695
VERSION     XP_040943695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087761.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..330
                     /product="ERBB-3 BINDING PROTEIN 1 isoform X2"
                     /calculated_mol_wt=35903
     Region          1..322
                     /region_name="APP_MetAP"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; cl00279"
                     /db_xref="CDD:469704"
     Site            order(27,47,58,167,236,253)
                     /site_type="active"
                     /db_xref="CDD:238522"
     CDS             1..330
                     /gene="LOC107958052"
                     /coded_by="XM_041087761.1:361..1353"
                     /db_xref="GeneID:107958052"
ORIGIN      
        1 myknskkkie rgvafptcls vnntvchfsp lasdtselee gdmvkidmgc hidgfiavva
       61 hthvvqsgpi tgkqadvvaa antaaevalr lvrpgkknkd vsdaiqkvaa aydckivegv
      121 lshqlkqfvi dgnkvilsvs npdtrvddae feeneayavd ivastgegkp klldekqtti
      181 fkravdknyh lkmkasrfif seinqrfpil pftaraleek rarlglvecv nhdllqpypv
      241 lyekpgdyva hikftvllmp ngsdritshp lqelqptkmi ddpeikawla lgtktkkkgg
      301 gkkkkgkkgd kaeggaegea mdastncgas
//
LOCUS       XP_016671889             226 aa            linear   PLN 06-AUG-2024
DEFINITION  ran-binding protein 1 homolog b [Gossypium hirsutum].
ACCESSION   XP_016671889
VERSION     XP_016671889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816400.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..226
                     /product="ran-binding protein 1 homolog b"
                     /calculated_mol_wt=24794
     Region          31..164
                     /region_name="RanBD_RanBP1"
                     /note="Ran-binding domain; cd13179"
                     /db_xref="CDD:270000"
     Site            order(42..43,45..48,61,63,65,72..75,92,94,96..97,99..103,
                     106..108,116..119,126,128,132,135,137,141,145)
                     /site_type="other"
                     /note="Ran#RanBP1#RanGAP complex [polypeptide binding]"
                     /db_xref="CDD:270000"
     Site            order(42..43,46..48,57,63,65,70..75,79,90,92,94,96..103,
                     106..108,116..119,122..124,126,128,132,139,141,143,145)
                     /site_type="other"
                     /note="CRM1-RanBP1-RanGTP complex [polypeptide binding]"
                     /db_xref="CDD:270000"
     CDS             1..226
                     /gene="LOC107891560"
                     /coded_by="XM_016816400.2:158..838"
                     /db_xref="GeneID:107891560"
ORIGIN      
        1 maiddkagpe shcredddna paaavddedt gaqvapivkl eevavttgee dedpildlka
       61 klyrfdkegn qwkergvgnv kllkhkvngk vrlvmrqskt lkicanhfvi ptmtvqehsg
      121 ndkscvwhaa dfadgnlkee mfcirfpsve ncktfmetvq evaesqgkke enkdatvtad
      181 lldklsvgei ksdgkedtvv asntkeavkd eakteedkkd eaaska
//
LOCUS       XP_040943696             480 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943696
VERSION     XP_040943696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087762.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53362
     Region          <57..110
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          57..88
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..480
                     /gene="LOC121214063"
                     /coded_by="XM_041087762.1:186..1628"
                     /db_xref="GeneID:121214063"
ORIGIN      
        1 memvsdsysd lvqaiildnv tyfgrllcss tydidaeipf rcfpltgskd elkvlmrtpl
       61 miaamtnspk vveyivgnfk anvvrvstsd gataiecain sdcstiveml kdarigkgrp
      121 stasygqsss gqrrrsvstq slqgrqemdv wtpfcargai grplssnnqv nwnmnhwmqg
      181 rqgppisnnq vcrqepniri pfygscavgi qplssinqvy enmsrsmqgw qepniqrpfy
      241 arhavgewpl sstnqvyqnm nssmqgrqel nmttsfdard aagempsssd dqvhknmnrs
      301 mqerqelnip apddvrdaag emasssidqn tsrsmqerqe lniptpddvr daagemasns
      361 idqntnrsmq erqelniptp edvrdaagem asssidqntn hsmpgtqepn mptpsdardl
      421 agemplnskd qvnqdmdygm qgrqepevti nsstpateim nlywppltee gkliqlprrr
//
LOCUS       XP_016673413             259 aa            linear   PLN 06-AUG-2024
DEFINITION  trihelix transcription factor GT-3b [Gossypium hirsutum].
ACCESSION   XP_016673413
VERSION     XP_016673413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016817924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..259
                     /product="trihelix transcription factor GT-3b"
                     /calculated_mol_wt=31365
     Region          34..99
                     /region_name="GT1"
                     /note="myb-like, SANT family; cd12203"
                     /db_xref="CDD:213402"
     Region          <178..>255
                     /region_name="PTZ00266"
                     /note="NIMA-related protein kinase; Provisional"
                     /db_xref="CDD:173502"
     CDS             1..259
                     /gene="LOC107892905"
                     /coded_by="XM_016817924.2:554..1333"
                     /db_xref="GeneID:107892905"
ORIGIN      
        1 meglhhhqyy hrqhhqqqhq qqamnvnvdv drlpqwsiqe tkeflmirae ldpsfmetkr
       61 nkqlwefist rlkekgynrs aeqckckwkn lvtrykgcem veeeakrqqq fpfyndlqai
      121 fsarkqttsk klcsdeeedk gryrgkekgk kgvsisgsps esindgndik eilkcfmrqq
      181 leleiqwrea levrenerrl kemewrrtme alenervmmd irwrekeeqr rireearser
      241 idalvttlln kltrddhmk
//
LOCUS       XP_016671884             601 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT7 [Gossypium hirsutum].
ACCESSION   XP_016671884
VERSION     XP_016671884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..601
                     /product="probable methyltransferase PMT7"
                     /calculated_mol_wt=68260
     Region          91..595
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..601
                     /gene="LOC107891555"
                     /coded_by="XM_016816395.2:362..2167"
                     /db_xref="GeneID:107891555"
ORIGIN      
        1 mggyalgsaf dsksgqmimv slllmfgsff lgnlfgnnap iyvsqvsets ssysssaais
       61 tfinkvslty retplvvpan gmnicplkfn eyipchdisy vkqlardlnl skseqlerhc
      121 pplgkrlfcl vpppqdykip ikwpvsrdyv wrsnvnhthl aevkggqnwv heknqlwwfp
      181 gggthfkhga aeyiqrlgnm ttdetgdlrs agvvqvldvg cgvasfsayl lpldiqtmsf
      241 apkdghenqi qfalergiga misviaskql pypsnsfemv hcsrcridwh endgillkev
      301 nrllrsqgyf vysappayrk dkdypviwnk lvdlttgmcw kliarkvqta iwikeedpsc
      361 lkhnaelkvi dicdavdetk pswktplmnc iqlagattas kklpsrperl svyseslsri
      421 gisreefssd snfwqdqvhy ylklmnvsrt eirnvmdmna lfggfaaaln eypvwvmnvv
      481 pssmqntlsa iydrgligaf hdwcepfsty prtydllhan hlfsqyknsg egcqfediml
      541 emdrilrpqg fviirdedsi isriqdlapk flwefeshil enkekqretl licrkkfwav
      601 l
//
LOCUS       XP_016671883             357 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Gossypium
            hirsutum].
ACCESSION   XP_016671883
VERSION     XP_016671883.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..357
                     /product="probable 2-oxoglutarate-dependent dioxygenase
                     At5g05600"
                     /calculated_mol_wt=40347
     Region          1..351
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..357
                     /gene="LOC107891554"
                     /coded_by="XM_016816394.2:308..1381"
                     /db_xref="GeneID:107891554"
ORIGIN      
        1 mmnclqswpe pvvrvqslse sgiraipdry ikppsdrpgf enqehvdipv vdlknlfshd
       61 rtlheetlkl issackewgf fqavnhgish elmkrtrevw reffnsplev kqeyanaptt
      121 yegygsrlgv qkgaildwsd yfflhylpvh lrnpskwpsl psscrdlise ygaevvklcg
      181 rllkamsisl glkedylqna fggedigacl rvnfypkcpq pdltlglssh sdpggmtlll
      241 pdhdiaglqv rkngkwitvk pvpnafivnv gdqiqvmsna iyksvehrvi vnsvkdrvsl
      301 affcnpqsdl liepakelvs edrpalyspm tfdeyrlyir tygprgktqv efsgsnr
//
LOCUS       XP_016671877            1337 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016671877
VERSION     XP_016671877.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816388.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1337
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=144764
     Region          100..315
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          1088..1266
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1337
                     /gene="LOC107891552"
                     /coded_by="XM_016816388.2:129..4142"
                     /db_xref="GeneID:107891552"
ORIGIN      
        1 mvgimnpvsr ekleslsssv kfaidlgskl elcrqlkhdl leedaadlse flprifdlys
       61 dpsgpvrkfa teiigeigvk hlefvpelap flitvledat pavarqsvac sidlfrhtle
      121 kiairglyss eldsdlessw swmlklkeki ysiafqpgsg girlvalkfv eavillytpn
      181 pngslepppn egtsiefnit wlrgghplln vgdlsieasq rlvllldqlr fpavkslsts
      241 vivviinsls aiakkrpayy grilpvllsl dppsfvikgv hvygahhalk nallsclkct
      301 hpsaapwrer ilgalkemka ggladlalnq vhkingsvee akddsllike ekpltktyda
      361 agsnvgrkrs gtegssdlae kdevagkrvk atpsaseest kelnrnitvs qgdisstqss
      421 trkvdvdtgp vqqlvgmfga lvaqgekavg slgilisnis adllaevvma nmcnlppthp
      481 htdtddelle dmcivgsdtq akyppsflad vislsstfpp iasmlnsqqs vpnkiviqkt
      541 egeeevdvva dpnsalayag mahedenall atdlpvssni vlpgmkidpp tpsdihdtgn
      601 lesgipglds sfrndglsdt qaasslvstd iedasqeqst sfggksplhv lpsisidrse
      661 elspkaavtd srsmvsstat svvsscpfvl pkmsapvvnl sedqkddvqk lafvriveay
      721 kqiavaggsq vrssllaylg velpselelq kvlrehilsd yinheghelt lrvlyrlfgk
      781 aedesdflsc ttaasayetf llavaetlrd sfppsdksls kllgeaprlp ksvlnllgcl
      841 cspgisekae esqsgdrvtq glstvwslil lrppirdvcl kialqsavhh leevrmkair
      901 lvanklyplq siaqqieefa remllsvvnv datertgaeg liseshkdsd lekssnehqs
      961 mssiskdisa dvhqsetshs gsspsvpeaq rcmslyfalc tkkhslfgqi fiiygsaske
     1021 vkqaihrhip ilvrtmglss dlleiisdpp sgsenllmqv lqtltegtvp saeliftikk
     1081 lfdsklkdve ilvpvlpflp gdevlllfph lvnlpldkfq avltrllqgs ahsgpvltpa
     1141 evliaihgiv perdgiplkk vtdacnacfe qrhiftqqvl akvlnqlver iplpllfmrt
     1201 vlqaigafpa lvefimeils rlvskqiwqn pklwvgflkc alltkpqsfs vllqlpppql
     1261 enalnrtaal kaplvahasq qnirnslprs mlavlglapd tqsssqaqts qahtrdtsns
     1321 ekdaavteks kesssas
//
LOCUS       XP_016671878            1335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016671878
VERSION     XP_016671878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1335
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=144522
     Region          100..315
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          1086..1264
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1335
                     /gene="LOC107891552"
                     /coded_by="XM_016816389.2:129..4136"
                     /db_xref="GeneID:107891552"
ORIGIN      
        1 mvgimnpvsr ekleslsssv kfaidlgskl elcrqlkhdl leedaadlse flprifdlys
       61 dpsgpvrkfa teiigeigvk hlefvpelap flitvledat pavarqsvac sidlfrhtle
      121 kiairglyss eldsdlessw swmlklkeki ysiafqpgsg girlvalkfv eavillytpn
      181 pngslepppn egtsiefnit wlrgghplln vgdlsieasq rlvllldqlr fpavkslsts
      241 vivviinsls aiakkrpayy grilpvllsl dppsfvikgv hvygahhalk nallsclkct
      301 hpsaapwrer ilgalkemka ggladlalnq vhkingsvee akddsllike ekpltktyda
      361 agsnvgrkrs gtegssdlae kdevagkrvk atpsaseest kelnrnitvs qgdisstqss
      421 trkvdvdtgp vqqlvgmfga lvaqgekavg slgilisnis adllaevvma nmcnlppthp
      481 htdtddelle dmcivgsdtq akyppsflad vislsstfpp iasmlnsqqs vpnkivkteg
      541 eeevdvvadp nsalayagma hedenallat dlpvssnivl pgmkidpptp sdihdtgnle
      601 sgipgldssf rndglsdtqa asslvstdie dasqeqstsf ggksplhvlp sisidrseel
      661 spkaavtdsr smvsstatsv vsscpfvlpk msapvvnlse dqkddvqkla fvriveaykq
      721 iavaggsqvr ssllaylgve lpselelqkv lrehilsdyi nhegheltlr vlyrlfgkae
      781 desdflsctt aasayetfll avaetlrdsf ppsdkslskl lgeaprlpks vlnllgclcs
      841 pgisekaees qsgdrvtqgl stvwslillr ppirdvclki alqsavhhle evrmkairlv
      901 anklyplqsi aqqieefare mllsvvnvda tertgaegli seshkdsdle kssnehqsms
      961 siskdisadv hqsetshsgs spsvpeaqrc mslyfalctk khslfgqifi iygsaskevk
     1021 qaihrhipil vrtmglssdl leiisdppsg senllmqvlq tltegtvpsa eliftikklf
     1081 dsklkdveil vpvlpflpgd evlllfphlv nlpldkfqav ltrllqgsah sgpvltpaev
     1141 liaihgivpe rdgiplkkvt dacnacfeqr hiftqqvlak vlnqlverip lpllfmrtvl
     1201 qaigafpalv efimeilsrl vskqiwqnpk lwvgflkcal ltkpqsfsvl lqlpppqlen
     1261 alnrtaalka plvahasqqn irnslprsml avlglapdtq sssqaqtsqa htrdtsnsek
     1321 daavtekske sssas
//
LOCUS       XP_016671879            1332 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016671879
VERSION     XP_016671879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1332
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=144196
     Region          100..315
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          1088..1261
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1332
                     /gene="LOC107891552"
                     /coded_by="XM_016816390.2:129..4127"
                     /db_xref="GeneID:107891552"
ORIGIN      
        1 mvgimnpvsr ekleslsssv kfaidlgskl elcrqlkhdl leedaadlse flprifdlys
       61 dpsgpvrkfa teiigeigvk hlefvpelap flitvledat pavarqsvac sidlfrhtle
      121 kiairglyss eldsdlessw swmlklkeki ysiafqpgsg girlvalkfv eavillytpn
      181 pngslepppn egtsiefnit wlrgghplln vgdlsieasq rlvllldqlr fpavkslsts
      241 vivviinsls aiakkrpayy grilpvllsl dppsfvikgv hvygahhalk nallsclkct
      301 hpsaapwrer ilgalkemka ggladlalnq vhkingsvee akddsllike ekpltktyda
      361 agsnvgrkrs gtegssdlae kdevagkrvk atpsaseest kelnrnitvs qgdisstqss
      421 trkvdvdtgp vqqlvgmfga lvaqgekavg slgilisnis adllaevvma nmcnlppthp
      481 htdtddelle dmcivgsdtq akyppsflad vislsstfpp iasmlnsqqs vpnkiviqkt
      541 egeeevdvva dpnsalayag mahedenall atdlpvssni vlpgmkidpp tpsdihdtgn
      601 lesgipglds sfrndglsdt qaasslvstd iedasqeqst sfggksplhv lpsisidrse
      661 elspkaavtd srsmvsstat svvsscpfvl pkmsapvvnl sedqkddvqk lafvriveay
      721 kqiavaggsq vrssllaylg velpselelq kvlrehilsd yinheghelt lrvlyrlfgk
      781 aedesdflsc ttaasayetf llavaetlrd sfppsdksls kllgeaprlp ksvlnllgcl
      841 cspgisekae esqsgdrvtq glstvwslil lrppirdvcl kialqsavhh leevrmkair
      901 lvanklyplq siaqqieefa remllsvvnv datertgaeg liseshkdsd lekssnehqs
      961 mssiskdisa dvhqsetshs gsspsvpeaq rcmslyfalc tkkhslfgqi fiiygsaske
     1021 vkqaihrhip ilvrtmglss dlleiisdpp sgsenllmqv lqtltegtvp saeliftikk
     1081 lfdsklkdve ilvpvlpflp gdevlllfph lvnlpldkfq avltrllqgs ahsgpvltpa
     1141 evliaihgiv perdgiplkk vtdacnacfe qrhiftqqvl akveriplpl lfmrtvlqai
     1201 gafpalvefi meilsrlvsk qiwqnpklwv gflkcalltk pqsfsvllql pppqlenaln
     1261 rtaalkaplv ahasqqnirn slprsmlavl glapdtqsss qaqtsqahtr dtsnsekdaa
     1321 vtekskesss as
//
LOCUS       XP_016671880            1195 aa            linear   PLN 06-AUG-2024
DEFINITION  symplekin isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016671880
VERSION     XP_016671880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1195
                     /product="symplekin isoform X4"
                     /calculated_mol_wt=128897
     Region          <19..173
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          946..1124
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1195
                     /gene="LOC107891552"
                     /coded_by="XM_016816391.2:190..3777"
                     /db_xref="GeneID:107891552"
ORIGIN      
        1 mdvkvegedi fysfpgsggi rlvalkfvea villytpnpn gslepppneg tsiefnitwl
       61 rgghpllnvg dlsieasqrl vllldqlrfp avkslstsvi vviinslsai akkrpayygr
      121 ilpvllsldp psfvikgvhv ygahhalkna llsclkcthp saapwreril galkemkagg
      181 ladlalnqvh kingsveeak ddsllikeek pltktydaag snvgrkrsgt egssdlaekd
      241 evagkrvkat psaseestke lnrnitvsqg disstqsstr kvdvdtgpvq qlvgmfgalv
      301 aqgekavgsl gilisnisad llaevvmanm cnlppthpht dtddelledm civgsdtqak
      361 yppsfladvi slsstfppia smlnsqqsvp nkiviqkteg eeevdvvadp nsalayagma
      421 hedenallat dlpvssnivl pgmkidpptp sdihdtgnle sgipgldssf rndglsdtqa
      481 asslvstdie dasqeqstsf ggksplhvlp sisidrseel spkaavtdsr smvsstatsv
      541 vsscpfvlpk msapvvnlse dqkddvqkla fvriveaykq iavaggsqvr ssllaylgve
      601 lpselelqkv lrehilsdyi nhegheltlr vlyrlfgkae desdflsctt aasayetfll
      661 avaetlrdsf ppsdkslskl lgeaprlpks vlnllgclcs pgisekaees qsgdrvtqgl
      721 stvwslillr ppirdvclki alqsavhhle evrmkairlv anklyplqsi aqqieefare
      781 mllsvvnvda tertgaegli seshkdsdle kssnehqsms siskdisadv hqsetshsgs
      841 spsvpeaqrc mslyfalctk khslfgqifi iygsaskevk qaihrhipil vrtmglssdl
      901 leiisdppsg senllmqvlq tltegtvpsa eliftikklf dsklkdveil vpvlpflpgd
      961 evlllfphlv nlpldkfqav ltrllqgsah sgpvltpaev liaihgivpe rdgiplkkvt
     1021 dacnacfeqr hiftqqvlak vlnqlverip lpllfmrtvl qaigafpalv efimeilsrl
     1081 vskqiwqnpk lwvgflkcal ltkpqsfsvl lqlpppqlen alnrtaalka plvahasqqn
     1141 irnslprsml avlglapdtq sssqaqtsqa htrdtsnsek daavtekske sssas
//
LOCUS       XP_040943698            1193 aa            linear   PLN 06-AUG-2024
DEFINITION  symplekin isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943698
VERSION     XP_040943698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087764.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1193
                     /product="symplekin isoform X5"
                     /calculated_mol_wt=128656
     Region          <19..173
                     /region_name="SYMPK_PTA1_N"
                     /note="Symplekin/PTA1 N-terminal; pfam11935"
                     /db_xref="CDD:463403"
     Region          944..1122
                     /region_name="Symplekin_C"
                     /note="Symplekin tight junction protein C terminal;
                     pfam12295"
                     /db_xref="CDD:463523"
     CDS             1..1193
                     /gene="LOC107891552"
                     /coded_by="XM_041087764.1:190..3771"
                     /db_xref="GeneID:107891552"
ORIGIN      
        1 mdvkvegedi fysfpgsggi rlvalkfvea villytpnpn gslepppneg tsiefnitwl
       61 rgghpllnvg dlsieasqrl vllldqlrfp avkslstsvi vviinslsai akkrpayygr
      121 ilpvllsldp psfvikgvhv ygahhalkna llsclkcthp saapwreril galkemkagg
      181 ladlalnqvh kingsveeak ddsllikeek pltktydaag snvgrkrsgt egssdlaekd
      241 evagkrvkat psaseestke lnrnitvsqg disstqsstr kvdvdtgpvq qlvgmfgalv
      301 aqgekavgsl gilisnisad llaevvmanm cnlppthpht dtddelledm civgsdtqak
      361 yppsfladvi slsstfppia smlnsqqsvp nkivktegee evdvvadpns alayagmahe
      421 denallatdl pvssnivlpg mkidpptpsd ihdtgnlesg ipgldssfrn dglsdtqaas
      481 slvstdieda sqeqstsfgg ksplhvlpsi sidrseelsp kaavtdsrsm vsstatsvvs
      541 scpfvlpkms apvvnlsedq kddvqklafv riveaykqia vaggsqvrss llaylgvelp
      601 selelqkvlr ehilsdyinh egheltlrvl yrlfgkaede sdflscttaa sayetfllav
      661 aetlrdsfpp sdkslskllg eaprlpksvl nllgclcspg isekaeesqs gdrvtqglst
      721 vwslillrpp irdvclkial qsavhhleev rmkairlvan klyplqsiaq qieefareml
      781 lsvvnvdate rtgaeglise shkdsdleks snehqsmssi skdisadvhq setshsgssp
      841 svpeaqrcms lyfalctkkh slfgqifiiy gsaskevkqa ihrhipilvr tmglssdlle
      901 iisdppsgse nllmqvlqtl tegtvpsael iftikklfds klkdveilvp vlpflpgdev
      961 lllfphlvnl pldkfqavlt rllqgsahsg pvltpaevli aihgivperd giplkkvtda
     1021 cnacfeqrhi ftqqvlakvl nqlveriplp llfmrtvlqa igafpalvef imeilsrlvs
     1081 kqiwqnpklw vgflkcallt kpqsfsvllq lpppqlenal nrtaalkapl vahasqqnir
     1141 nslprsmlav lglapdtqss sqaqtsqaht rdtsnsekda avtekskess sas
//
LOCUS       XP_016671882             340 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ homolog subfamily B member 13 [Gossypium hirsutum].
ACCESSION   XP_016671882
VERSION     XP_016671882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..340
                     /product="dnaJ homolog subfamily B member 13"
                     /calculated_mol_wt=37188
     Region          4..339
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..340
                     /gene="LOC107891553"
                     /coded_by="XM_016816393.2:141..1163"
                     /db_xref="GeneID:107891553"
ORIGIN      
        1 mgvdyykilq vdrnakdedl kkayrklamk whpdknpnnk kdaeakfkqi seaydvlsdp
       61 qkravydqyg eeglkgqmpp pgaggfgggd sggpttfrfn trnpddifse ffgfsspfgm
      121 gdmggpraga sgfprgmfge difgsfrgga gegsttmprk gapidrplpc sledlykgtt
      181 kkmkisrdvi dgsgrpttve eiltidikpg wkkgtkitfp ekgneqrgvi psdlvfiide
      241 kphsvfkrdg ndlivtqkis lvealtgyta qlttldgrnl tvpinniisp tyeevvkgeg
      301 mpipkdpskk gnlrikfnik fptkltaeqk tgikrliasp
//
LOCUS       XP_016671876             310 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pyridoxal 5'-phosphate synthase subunit PDX1 [Gossypium
            hirsutum].
ACCESSION   XP_016671876
VERSION     XP_016671876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="probable pyridoxal 5'-phosphate synthase subunit
                     PDX1"
                     /calculated_mol_wt=33141
     Region          21..308
                     /region_name="PdxS"
                     /note="Pyridoxal 5'-phosphate synthase subunit PdxS
                     [Coenzyme transport and metabolism]; COG0214"
                     /db_xref="CDD:439984"
     CDS             1..310
                     /gene="LOC107891550"
                     /coded_by="XM_016816387.2:294..1226"
                     /db_xref="GeneID:107891550"
ORIGIN      
        1 mdgtgvvavy gngamtethn kstfsvkvgl aqmlrggvim dvvtpeqari aeeagacavm
       61 alervpadir aqggvarmsd pqlikeikqa vtipvmakar ighfveaqil eaigidyvde
      121 sevltpadee nhinkhnfri pfvcgcrnlg ealrrirega amirtkgeag tgniieavrh
      181 vrsvmgdirv lrnmdddevf sfakkiqspy dlvmqtkqlg rlpvvhfaag gvatpadaal
      241 mmqlgcdgvf vgsgvfksgd parraraivq avthysdpev laevscglge amvginlndk
      301 nverfaarsd
//
LOCUS       XP_040943699             476 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase APD2 [Gossypium hirsutum].
ACCESSION   XP_040943699
VERSION     XP_040943699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087765.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..476
                     /product="E3 ubiquitin-protein ligase APD2"
                     /calculated_mol_wt=53064
     Region          147..214
                     /region_name="DUF4792"
                     /note="Domain of unknown function (DUF4792); pfam16040"
                     /db_xref="CDD:464988"
     Region          238..345
                     /region_name="DUF4793"
                     /note="Domain of unknown function (DUF4793); pfam16041"
                     /db_xref="CDD:464989"
     Region          <367..>467
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          422..470
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..476
                     /gene="LOC107892564"
                     /coded_by="XM_041087765.1:146..1576"
                     /db_xref="GeneID:107892564"
ORIGIN      
        1 mdepnwsqps isgassssyr edsgaavass sqvreeeedr dqdyppqhhf qfhspelenh
       61 higgflsyrd nspafndnss svirddtwsc iivvftfwff vsmtlilgvy gpmnlqlgpn
      121 cslliqpnpl fvqsvtveek dgtkpglnly glykspslde vttwsetytp tiqadshmew
      181 irylnrgsqv nisynvnsvs ssvfliiaeg seglarwled ptypnttlsw nivhgsgmiq
      241 qdiyrsssyy ialgnmnted ikvqlkftfk ayiyntteay ykctfangvc slnilfpegn
      301 svvltspgpe qrrsahdwsf rlsygprwit yivgiggmtg imlvafnfln kfqytredea
      361 rlrngelasa rapllsrkad dlssrgssyd svssdeadle dflagslegt sigdgensnn
      421 trrlcaicfd aprdcfflpc ghcvacfacg triaeadgtc picrrsmkkv rkiftv
//
LOCUS       XP_016671875             448 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar cation/proton exchanger 3 [Gossypium hirsutum].
ACCESSION   XP_016671875
VERSION     XP_016671875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..448
                     /product="vacuolar cation/proton exchanger 3"
                     /calculated_mol_wt=48521
     Region          63..422
                     /region_name="caca2"
                     /note="calcium/proton exchanger; TIGR00846"
                     /db_xref="CDD:273297"
     CDS             1..448
                     /gene="LOC107891549"
                     /coded_by="XM_016816386.2:207..1553"
                     /db_xref="GeneID:107891549"
ORIGIN      
        1 massrepwll engnlkglsk eirhgrtahn msssslrkks hltlvskvpc rklrqflanl
       61 qevilgtkls vlfpaiplai vadcygfarp wvfalsllgl tplaervsfl teqiayytgp
      121 tvggllnatc gnateliiai falsqrkidv vkysllgsvl snlllvlgts lfcggianlr
      181 leqkfdrrqa dvnsllllla llchslpmlf rmsgasdavt vdpilqlsra ssivmliayl
      241 sylvfqlfth rqlfeaqees dndengggee epvigfwsgf iwlvgmtavi sllseyvvqt
      301 iedasdswgi svsfisiill pivgnaaeha gaiifafknk ldislgvalg satqismfvv
      361 plcvitawim gikmdlnfnl letgslalsi ivvafalqdg tshymkglvl lllyivigac
      421 ffvsktplnq lstinsgtka aidtifra
//
LOCUS       XP_016671869             385 aa            linear   PLN 06-AUG-2024
DEFINITION  probable envelope ADP,ATP carrier protein, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016671869
VERSION     XP_016671869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..385
                     /product="probable envelope ADP,ATP carrier protein,
                     chloroplastic"
                     /calculated_mol_wt=42488
     Region          99..357
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..385
                     /gene="LOC107891545"
                     /coded_by="XM_016816380.2:137..1294"
                     /db_xref="GeneID:107891545"
ORIGIN      
        1 mrknkpilrf etipgltlfd ttkrddflhr ntrltyhldn gsgsarkfac ismadkreqr
       61 rdfaptltql lnhplaalay vprdvaifaa gavagavakt vtapldrvkl lmqtqgvrvg
      121 qesakksigl iealvsigkd dgikgywkgn lpqvirvvpy savqlfayet ykklftgkdg
      181 elsvlerlaa gacagmtstf itypldvlrl rlavepgyrk msevaltmlr eegfgsfyyg
      241 lvpsligiap yiavnfcifd lvkkalpeky rqktqasllt avvsaaaatl tcypldtvrr
      301 qmqmrgtpyk svmdaipgii erdgvgglyr gfvpnalknl pnssirlttf divkrliaas
      361 ekqfekmvde nrqkakqetd veqsc
//
LOCUS       XP_016671872             285 aa            linear   PLN 06-AUG-2024
DEFINITION  chlorophyll a-b binding protein CP29.1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016671872
VERSION     XP_016671872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..285
                     /product="chlorophyll a-b binding protein CP29.1,
                     chloroplastic"
                     /calculated_mol_wt=30969
     Region          5..285
                     /region_name="PLN00187"
                     /note="photosystem II light-harvesting complex II protein
                     Lhcb4; Provisional"
                     /db_xref="CDD:177781"
     CDS             1..285
                     /gene="LOC107891546"
                     /coded_by="XM_016816383.2:156..1013"
                     /db_xref="GeneID:107891546"
ORIGIN      
        1 maaitnaaat ssfmgtlfpd vytssgrfva rfgfggkkaa pkkvskrtpd rplwypgava
       61 pdwldgslvg dygfdpfglg kpaeylqydl dsldqnlakn sageiigtrt evadvkatpf
      121 qpysevfglq rfrecelihg rwamlatlga ltvewltgvt wqdagkvelv egssylgqpl
      181 pfsmttliwi evlvigfief qrnaeldpek rlypggkyfd plglaadpek katlqlaeik
      241 harlamvafl gfavqaaatg kgplnnwath lsdplhttii dtfts
//
LOCUS       XP_016671873             218 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial inner membrane protease subunit 2 [Gossypium
            hirsutum].
ACCESSION   XP_016671873
VERSION     XP_016671873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..218
                     /product="mitochondrial inner membrane protease subunit 2"
                     /calculated_mol_wt=23874
     Region          57..198
                     /region_name="Peptidase_S26"
                     /note="Signal peptidase, peptidase S26; pfam10502"
                     /db_xref="CDD:431321"
     CDS             1..218
                     /gene="LOC107891547"
                     /coded_by="XM_016816384.2:193..849"
                     /db_xref="GeneID:107891547"
ORIGIN      
        1 mladsrkenn nqsklkprdw clplllpdcf scspdgsila rdssvvgnvd mgtpsvlwnv
       61 akkcftvgvi sltvsdlfas ivpvrgasms ptfnpktnsl ldslsddrvl veklclrkyk
      121 fshgdvivfc spdnhkekhi krivglpgdw vgtiydvvhi peghcwvegd nsassldsrs
      181 fgpvplglvk grvthilwpp hrvssierkt srnrvsps
//
LOCUS       XP_016671874             172 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 1 [Gossypium hirsutum].
ACCESSION   XP_016671874
VERSION     XP_016671874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..172
                     /product="high mobility group B protein 1"
                     /calculated_mol_wt=19391
     Region          54..114
                     /region_name="HMG-box_AtHMGB1-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 1 (HMGB1) and
                     similar proteins; cd22005"
                     /db_xref="CDD:438821"
     Site            order(54..55,57..61,64..65,72,85..86,89,92..93,100,104,
                     107,111,114)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438821"
     CDS             1..172
                     /gene="LOC107891548"
                     /coded_by="XM_016816385.2:219..737"
                     /db_xref="GeneID:107891548"
ORIGIN      
        1 mtgarskaak kntgealkpa ddrkigkrka avdkstirra kkekrakkdp nkpkrppsaf
       61 fvfleefrgt fkkenpnvka vsavgkaage mwksmseeek apyevksger kveyekqmka
      121 ynkkqessan gtgddhqgee deedeaseek gqhlkheddd eeeeddeeee ed
//
LOCUS       XP_016671866             374 aa            linear   PLN 06-AUG-2024
DEFINITION  putative serine/threonine-protein kinase [Gossypium hirsutum].
ACCESSION   XP_016671866
VERSION     XP_016671866.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816377.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..374
                     /product="putative serine/threonine-protein kinase"
                     /calculated_mol_wt=41610
     Region          63..317
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..374
                     /gene="LOC107891544"
                     /coded_by="XM_016816377.2:480..1604"
                     /db_xref="GeneID:107891544"
ORIGIN      
        1 mncrylfdcf kgkhrqeqkq gqefatanvr lfsynslrsa tsdfhpsnri ggggygvvyr
       61 gvlrdgtqva iktlsteskq gsrefvteid misniqhpnl veligccvdd nhrilvyeyl
      121 ennslasvll gsrskyiald wpkraaiclg tasgiaflhy eavprivhrd ikasnilldg
      181 dfhpkigdfg laklfpdnvt hlstrvagtv gylapeyall gqltkkadvy sfgvlileiv
      241 sgksstkaaf gvelmllvew twklkqeerl ldivdpelte ypedevlrfi kvalfctqas
      301 ahqrptmnqv vhmlskdvhl ndkllteagv ykgyrrtsse ltssslktkg kqsmepssst
      361 nivsshsite mlpr
//
LOCUS       XP_016671867             374 aa            linear   PLN 06-AUG-2024
DEFINITION  putative serine/threonine-protein kinase [Gossypium hirsutum].
ACCESSION   XP_016671867
VERSION     XP_016671867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816378.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..374
                     /product="putative serine/threonine-protein kinase"
                     /calculated_mol_wt=41610
     Region          63..317
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..374
                     /gene="LOC107891544"
                     /coded_by="XM_016816378.2:484..1608"
                     /db_xref="GeneID:107891544"
ORIGIN      
        1 mncrylfdcf kgkhrqeqkq gqefatanvr lfsynslrsa tsdfhpsnri ggggygvvyr
       61 gvlrdgtqva iktlsteskq gsrefvteid misniqhpnl veligccvdd nhrilvyeyl
      121 ennslasvll gsrskyiald wpkraaiclg tasgiaflhy eavprivhrd ikasnilldg
      181 dfhpkigdfg laklfpdnvt hlstrvagtv gylapeyall gqltkkadvy sfgvlileiv
      241 sgksstkaaf gvelmllvew twklkqeerl ldivdpelte ypedevlrfi kvalfctqas
      301 ahqrptmnqv vhmlskdvhl ndkllteagv ykgyrrtsse ltssslktkg kqsmepssst
      361 nivsshsite mlpr
//
LOCUS       XP_040943702             374 aa            linear   PLN 06-AUG-2024
DEFINITION  putative serine/threonine-protein kinase [Gossypium hirsutum].
ACCESSION   XP_040943702
VERSION     XP_040943702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087768.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..374
                     /product="putative serine/threonine-protein kinase"
                     /calculated_mol_wt=41610
     Region          63..317
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..374
                     /gene="LOC107891544"
                     /coded_by="XM_041087768.1:474..1598"
                     /db_xref="GeneID:107891544"
ORIGIN      
        1 mncrylfdcf kgkhrqeqkq gqefatanvr lfsynslrsa tsdfhpsnri ggggygvvyr
       61 gvlrdgtqva iktlsteskq gsrefvteid misniqhpnl veligccvdd nhrilvyeyl
      121 ennslasvll gsrskyiald wpkraaiclg tasgiaflhy eavprivhrd ikasnilldg
      181 dfhpkigdfg laklfpdnvt hlstrvagtv gylapeyall gqltkkadvy sfgvlileiv
      241 sgksstkaaf gvelmllvew twklkqeerl ldivdpelte ypedevlrfi kvalfctqas
      301 ahqrptmnqv vhmlskdvhl ndkllteagv ykgyrrtsse ltssslktkg kqsmepssst
      361 nivsshsite mlpr
//
LOCUS       XP_016671865             865 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016671865
VERSION     XP_016671865.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816376.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..865
                     /product="RNA polymerase II C-terminal domain
                     phosphatase-like 2 isoform X1"
                     /calculated_mol_wt=96003
     Region          <243..359
                     /region_name="HAD_FCP1-like"
                     /note="human CTD phosphatase subunit 1 (CTDP1/FCP1) and
                     related proteins; belongs to the haloacid
                     dehalogenase-like superfamily; cd07521"
                     /db_xref="CDD:319823"
     Region          690..752
                     /region_name="DSRM"
                     /note="Double-stranded RNA binding motif; smart00358"
                     /db_xref="CDD:214634"
     Site            order(694..695,697,718,736..738,741)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     CDS             1..865
                     /gene="LOC107891542"
                     /coded_by="XM_016816376.2:222..2819"
                     /db_xref="GeneID:107891542"
ORIGIN      
        1 msrlgfksmv yhgdfflgel ntipitdsnf qfpnneirih hisptserci plsilhtiss
       61 fpvrcklesp fpveqphlih lhascfyefk tavvlvgdee vhlvampskq kkfpcfwcfs
      121 vstglynscl gmlnlrclai vfdldetliv antmksfedr ievlrgwiar esdpirlsgm
      181 saelrryidd rlllkqyaes dcvvdngkmf kvqmeevppl sdghekvvrp virlqdrniv
      241 ltrinpeird tsvlvrlrpa wdelrsylta kgrkrfevyv ctmaerdyal emwrlldpga
      301 hligskqlld rvvcvksgsr ksllnvfrdg kchpqmamvi ddrskvwedk dqprvhvvpp
      361 fapyyapqae tanavpvlcv arnvacnarg lffkefddnv lrkmsevfye devvnlplap
      421 dvsnylmsee asfasngnng apicegmnga everrmnqse ekhvldsstr pvtsnpelrs
      481 etsqppvtdi vgpassvapl psqkpsilga pgllsnpmml gasvrrdnng segdydmkrr
      541 algikqsldl rnqssiqppl lpkfpiqtss ssvvpqggwl veedineshl ndrpsgttqe
      601 sdviksdklr gyqnpfphta pgsvstglps yasqvkieea rtgldtpkqn vlptahlsei
      661 ggtqnhlpsi trelqseggk mnllpshlsi gvlheigrrc gskvefrsvv stskdlqfsv
      721 evlftgekig vgmgktrrda qqqaaelalh nlaekyvayi aprsgavdrd fnnlslgten
      781 gflwdvnpas neaikegfpk dntseaaeep gsnsssianq pvekranspr lsesmpskrs
      841 kegvlrrlgs slsssrqpkn ehtis
//
LOCUS       XP_040943703             756 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943703
VERSION     XP_040943703.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087769.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..756
                     /product="RNA polymerase II C-terminal domain
                     phosphatase-like 2 isoform X2"
                     /calculated_mol_wt=84562
     Region          <243..359
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     CDS             1..756
                     /gene="LOC107891542"
                     /coded_by="XM_041087769.1:222..2492"
                     /db_xref="GeneID:107891542"
ORIGIN      
        1 msrlgfksmv yhgdfflgel ntipitdsnf qfpnneirih hisptserci plsilhtiss
       61 fpvrcklesp fpveqphlih lhascfyefk tavvlvgdee vhlvampskq kkfpcfwcfs
      121 vstglynscl gmlnlrclai vfdldetliv antmksfedr ievlrgwiar esdpirlsgm
      181 saelrryidd rlllkqyaes dcvvdngkmf kvqmeevppl sdghekvvrp virlqdrniv
      241 ltrinpeird tsvlvrlrpa wdelrsylta kgrkrfevyv ctmaerdyal emwrlldpga
      301 hligskqlld rvvcvksgsr ksllnvfrdg kchpqmamvi ddrskvwedk dqprvhvvpp
      361 fapyyapqae tanavpvlcv arnvacnarg lffkefddnv lrkmsevfye devvnlplap
      421 dvsnylmsee asfasngnng apicegmnga everrmnqse ekhvldsstr pvtsnpelrs
      481 etsqppvtdi vgpassvapl psqkpsilga pgllsnpmml gasvrrdnng segdydmkrr
      541 algikqsldl rnqssiqppl lpkfpiqtss ssvvpqggwl veedineshl ndrpsgttqe
      601 sdviksdklr gyqnpfphta pgsvstglps yasqvkieea rtgldtpkqn vlptahlsei
      661 ggtqnhlpsi trelqseggk mnllpshlsi gvlheigrrc gskvefrsvv stskdlqfsv
      721 efilfrfysl grrlvlewar qggmlsskll sllfii
//
LOCUS       XP_016671864            1057 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016671864
VERSION     XP_016671864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016816375.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1057
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=117341
     Region          33..74
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          82..383
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          230..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..>1021
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          398..421
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          422..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..495
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..569
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          570..593
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          594..615
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          616..639
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..688
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          689..712
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          713..734
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          737..760
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          761..786
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          803..883
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          884..907
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          908..929
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1057
                     /gene="LOC107891540"
                     /coded_by="XM_016816375.2:649..3822"
                     /db_xref="GeneID:107891540"
ORIGIN      
        1 mktflvswfs fnsyiavffs isnlvlvsgq cqsdqrqlll efkssfnstf tspgkmmkwn
       61 qtsdccswdg vscddgghvi gldlsngiiv gaidnssslf rlqhlqrlnl afnlfinafp
      121 tgfeklenlc ylnlsnagft gqipveisrl trlvtldlsv ilfqrslele mlvqnltrlr
      181 flyldgvnis atgnkwcral splielqvls msdcclsgpm dsslskirsl svirldhnnl
      241 sglvppflae fpnltslhln dndlsgrlpe eifqiptlqa ldlsnnklle gsikkfplna
      301 slqtlrltlt higgqipesi gnlgqltrie lafcnfsgpi pktvkklsql vylnfcsnsf
      361 sgpipnfsss rnltelnlag nqlngtihst dwsglsklvs vdlqtnklsg tipptlfgip
      421 slqalflsen qfdgnigdlh gkaslllryl dlrsnklqgq fpvslfefhg leylslssnn
      481 fsglipmtaf qnlrnlsyld lsynrlsida tttnisllsf ptfnslglgs cnltgfpdfl
      541 knqtslnyld lsknkihggi pnwiwkaksl sylnlsqnfl veverplrni tstlwfldlh
      601 gnqlhgkipi lplhaiyldy snnnfnsvlp ahvgdflqsa nffsisnnnf hgniprsicn
      661 ssalkvldls nnslrgpipq clfqmnvslg vlnlggnnls giipdtfses cqlqtlhlnq
      721 nrlegkvpks lanckmlevl dignnlings fpfhltsiam lrvlvlrsnn fsghidcsgd
      781 nsgwkmlqif dlasnnfsgk lhltclgtwd amqpnrnknq selkdlrfeg ealdpfyyqd
      841 siivtikgle lelvkiltif ttidiscnnv egpipevigt fkalyglnfs hnafsgpipv
      901 ffgnlreles vdlssnsldg eiplqlanln flsflnvsnn klvgpiptst qlqsfseasf
      961 ennaglcgpp lkatcglppa ktdnpsdars tinwnyisae tgfcfgfgvs vallifwkrw
     1021 rkwyfermdr alswlfpclp letrkhgrra trnerrh
//
LOCUS       XP_016727741            1138 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016727741
VERSION     XP_016727741.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872252.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727741.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1138
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=126502
     Region          32..75
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <100..>373
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          261..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          329..>975
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          333..356
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          357..379
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          380..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          405..428
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          429..453
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          454..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          478..502
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          531..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          553..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          577..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          601..620
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          623..645
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          647..669
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          671..695
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          696..719
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          720..743
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          744..767
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          835..863
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          867..890
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          891..914
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          915..936
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1138
                     /gene="LOC107938972"
                     /coded_by="XM_016872252.2:442..3858"
                     /db_xref="GeneID:107938972"
ORIGIN      
        1 mrmslfsllf lnsfvsvmli vdvvlvsaqc qsdqsqllvq lessfsynqt ssgklvpvkw
       61 nqstdccswd gvrcdgdghv isldlnsrsi sssidnsssl frlqhlqrln laynkfkpvf
      121 ptvfdklenl sylnlsnagf kgqipieisr ltrlvtldls vssllgrslk lekpnlemlv
      181 qnltslrfly ldgvnisatg newckallpl telqelsmsn cylsgpidss lsnlrslsvv
      241 rldnnnlsas vpqfftdfen ltslrlsatg lngrlpeqnf qvstlqildl stnkllegsf
      301 pifplkaslr tlalsgtnfg gqvpesignl eqltrielas cnfsgaipkt mkkltqlvyl
      361 dfsfnrfsgp ipsfsssknl tqlnlahnql ndkidstnws glsklvsvdl qnnklsgtip
      421 ptlfcipslr rlflsqnqfk gnlsdlqgra sslldtfdls snklqgqfpm svfelrglkf
      481 lslssnnfsg lipmralqnl knlssldlsy nslsidatdt nvsslsfpni ttlkltscnl
      541 tefpdfliyq srlsyldlsn nqiqgkipnw iwkvrslryl nlsqnflvkf ersleniiss
      601 lnvldlhgnr lqgkieilps natyldysnn nfnsvlpaqi gdflqfayff svsgnnfngs
      661 ipksiccsly lrvldmsdny lsgpipkclt qmsaslgvln lrgnnlsgii sdtfpesckl
      721 qtldlnqnrl egkvpqslgn ckklevvdig nnqisgsfpc hlknisklrv lvlrsnkfng
      781 sihchknntg wpmlqivdla snnfsgklhq kclatwkgmq vfenedqskv khlqfqflef
      841 ypnhyqdait vtikglewel vkiltvftti discnnfegp ipevigtfke lyglnfshna
      901 ftgsmpsflg nlqqlesldl ssnylsggip lqlvnlnfls flnvsnnklv gqiptgtqlq
      961 tfsnasfenn pglcgppltv kcanvfrptt htvpelqsvd gldwlfifig agfgvgaaaf
     1021 avplllwkta skwvddnvdk ileiilpkvg ltyrrpsdlk veadenpeed ktetddddee
     1081 dedkeskett eefrgrycvf cskldnntik kvihdlcctc ydspylspst stsssfsp
//
LOCUS       XP_016727729             276 aa            linear   PLN 06-AUG-2024
DEFINITION  BAG family molecular chaperone regulator 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727729
VERSION     XP_016727729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872240.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..276
                     /product="BAG family molecular chaperone regulator 4
                     isoform X1"
                     /calculated_mol_wt=30269
     Region          31..100
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          150..223
                     /region_name="BAG"
                     /note="BAG domain; pfam02179"
                     /db_xref="CDD:460475"
     CDS             1..276
                     /gene="LOC107938962"
                     /coded_by="XM_016872240.2:256..1086"
                     /db_xref="GeneID:107938962"
ORIGIN      
        1 mpggmlvrgd gddsnlhhnh eaaatssagp mikidvaygs aqhklfvpsh stvgelkkqi
       61 aeetglepdk qrvlfrgkek eddvhlssag mkdkskilvl enptgkvkkv eemanveekv
      121 eesiarkesk veeiketeem skafaavgrv rkevdklser vaaievavns gtkiaaeefd
      181 vsaellmrel lkldgieaeg eaklqrkaev rrvqgfhetl dklktrnsnp fhdsnkaasv
      241 ttkwetfdsg mgsstapppq pmssstkvte ewekfd
//
LOCUS       XP_016727730             235 aa            linear   PLN 06-AUG-2024
DEFINITION  BAG family molecular chaperone regulator 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016727730
VERSION     XP_016727730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872241.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..235
                     /product="BAG family molecular chaperone regulator 4
                     isoform X2"
                     /calculated_mol_wt=25912
     Region          <13..59
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          109..182
                     /region_name="BAG"
                     /note="BAG domain; pfam02179"
                     /db_xref="CDD:460475"
     CDS             1..235
                     /gene="LOC107938962"
                     /coded_by="XM_016872241.2:125..832"
                     /db_xref="GeneID:107938962"
ORIGIN      
        1 mglgsssckl ssgelkkqia eetglepdkq rvlfrgkeke ddvhlssagm kdkskilvle
       61 nptgkvkkve emanveekve esiarkeskv eeiketeems kafaavgrvr kevdklserv
      121 aaievavnsg tkiaaeefdv saellmrell kldgieaege aklqrkaevr rvqgfhetld
      181 klktrnsnpf hdsnkaasvt tkwetfdsgm gsstapppqp mssstkvtee wekfd
//
LOCUS       XP_016727731             251 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome c-type biogenesis protein CcmE homolog, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016727731
VERSION     XP_016727731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872242.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..251
                     /product="cytochrome c-type biogenesis protein CcmE
                     homolog, mitochondrial"
                     /calculated_mol_wt=28019
     Region          77..226
                     /region_name="CcmE"
                     /note="pfam03100"
                     /db_xref="CDD:460805"
     CDS             1..251
                     /gene="LOC107938963"
                     /coded_by="XM_016872242.2:100..855"
                     /db_xref="GeneID:107938963"
ORIGIN      
        1 matrlaalrl rshllrncst lstlrsppsi shpapppist thhyimsptl rflytstrri
       61 ptrpkkvdig ararqlqtrr lwtyaltfsc vagfvvlvln nfqdqlvfyv tptdalekyt
      121 knpsktkfrl gglvlegsvv qpssskemef vitdlitdil vryegslpdl freghsvvve
      181 gfvkpfteei krdvstrgvs skarsgdcyf satevlakhd ekympqevaa aieknkkmie
      241 dglegakesv v
//
LOCUS       XP_016727687             490 aa            linear   PLN 06-AUG-2024
DEFINITION  ammonium transporter 2 [Gossypium hirsutum].
ACCESSION   XP_016727687
VERSION     XP_016727687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872198.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..490
                     /product="ammonium transporter 2"
                     /calculated_mol_wt=52840
     Region          26..449
                     /region_name="Ammonium_transp"
                     /note="Ammonium Transporter Family; cl03012"
                     /db_xref="CDD:445985"
     CDS             1..490
                     /gene="LOC107938932"
                     /coded_by="XM_016872198.2:111..1583"
                     /db_xref="GeneID:107938932"
ORIGIN      
        1 maaeqiaytv kefapavpgw lnkgdnawqm tastlvgiqs mpglvilyas ivkkkwavns
       61 afmalyafaa vlicwvllcy rmafgdellp fwgkgapalg qkyllgrakv peskhrgynd
      121 vddiiteply pmatlvyfqf tfaaitlill agsvlgrmni rawmafvplw lifsytvgaf
      181 slwgggflyh wgvidysggy vihlssgiag ltaaywvgpr lkcdrerfpp nnvllmlaga
      241 gllwmgwsgf nggapyaani dssiavlntn vcaatsllvw tsldvvffgk psvvgavqgm
      301 mtglacitpg aglvqswaai vmgmlsgsip wvsmmvlhkk csllqkvdda lgvfhthava
      361 gllgglltgl laepdqckli lpfdtrgafy ggnggvqflk qivaalfvit wnvvstsiil
      421 lfirlfiplr mpdnqleigd daahgeeaya lwgdgekydp tqhgwhtsqf sevaapspyv
      481 ngargvtinl
//
LOCUS       XP_016727690             334 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor MPH1 [Gossypium hirsutum].
ACCESSION   XP_016727690
VERSION     XP_016727690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..334
                     /product="myb family transcription factor MPH1"
                     /calculated_mol_wt=37850
     Region          58..113
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..334
                     /gene="LOC107938935"
                     /coded_by="XM_016872201.2:176..1180"
                     /db_xref="GeneID:107938935"
ORIGIN      
        1 mmeensgtgc sktvkaetes eenegesrpk nggsssnstv eenekkpsvr pyvrsklprl
       61 rwtpdlhlrf vhaverlggq dratpklvlq lmnikglsia hvkshlqmyr skkiddsgqv
      121 isdhrhlves gdrniynlsq lpmlqgysnl lhhhhhhhhh hhhqgdssss fyrygdaswg
      181 nreysmsrpy tstsfinesr pglhrtvtek ifssnwasyd fkcnqvqprl gpietssmsq
      241 ntslsihnsn lisqdlkstk rktfdcdldl dlslritake dkqqnseqdd vvselslsly
      301 spssssskls rlkseedhct kknarrvstl dlti
//
LOCUS       XP_016727692             184 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727692
VERSION     XP_016727692.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="basic leucine zipper 19 isoform X1"
                     /calculated_mol_wt=20661
     Region          85..136
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          85..136
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(88..89,91..93,95..100,102..104)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(103,106..107,110..111,113..114,117..118,120..121,
                     124..125,127..128,131..132,134..135)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     CDS             1..184
                     /gene="LOC107938936"
                     /coded_by="XM_016872203.2:97..651"
                     /db_xref="GeneID:107938936"
ORIGIN      
        1 mdpknetspn aadnqmlnpn aenedltlpl esiqprrvsl hkrsasdsla fvkepnwlap
       61 sssaqgrllg gaagsssash mdpkklkrli anrasaqksr lrrveyvdkl ekkaefleat
      121 vslvsprvts erkkrmmllk enaelkqrie fydkllekqd aeykalkeer dllsftnlli
      181 qegi
//
LOCUS       XP_016727693             170 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727693
VERSION     XP_016727693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872204.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="basic leucine zipper 2 isoform X2"
                     /calculated_mol_wt=18950
     Region          85..136
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          85..136
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(88..89,91..93,95..100,102..104)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(103,106..107,110..111,113..114,117..118,120..121,
                     124..125,127..128,131..132,134..135)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     CDS             1..170
                     /gene="LOC107938936"
                     /coded_by="XM_016872204.2:97..609"
                     /db_xref="GeneID:107938936"
ORIGIN      
        1 mdpknetspn aadnqmlnpn aenedltlpl esiqprrvsl hkrsasdsla fvkepnwlap
       61 sssaqgrllg gaagsssash mdpkklkrli anrasaqksr lrrveyvdkl ekkaefleat
      121 vslvsprvts erkkrmmllk enaelkqrie fydkllekqd geaamlnikh
//
LOCUS       XP_016727716             941 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-overproduction protein 1 [Gossypium hirsutum].
ACCESSION   XP_016727716
VERSION     XP_016727716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..941
                     /product="ethylene-overproduction protein 1"
                     /calculated_mol_wt=107738
     Region          233..315
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          411..>924
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          763..>931
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(763,766..767,770..771,773,795,798..799,802..803,
                     805..806,829,832..833,836)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          763..790
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          793..823
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          857..887
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          891..918
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..941
                     /gene="LOC107938955"
                     /coded_by="XM_016872227.2:539..3364"
                     /db_xref="GeneID:107938955"
ORIGIN      
        1 mqrnkfttmr slkvldrckg aqvyalhttg ggggdvgdkl yhqlqdhlsv nparpismhn
       61 yqssnvplay vnetllpygl pvsdllepqi esclkfvdfi gtladlyrri encpqfektg
      121 myleqcaifk glsdpklfrr tlraarqhtv dvhskvvlaa wlryerrede lrgtnsmncc
      181 grniecpkat lvpgynpefi ydpcvcsknp qgesvddysi edvecstsde yrdmsfcigd
      241 neirciryci aslstpfrtm lyggfresrk ekinftqngi siecmkaael ysrirrvdsf
      301 dpriilellt fsnrfccddl klacdsylas lvndvenall lieygleena yllvaaclqv
      361 flrelpnsmh spnvmkyfcs peakerlalv ghasfllyff lsqiameedm kanttvmlle
      421 rladcatesw qkqlayhqlg vamyerkeyk daqswfeeay esghiyskvg iartkckrgh
      481 kysaykmins liseykpvgw mhqerslycd gkekmsdlem atqldptlcf pykyravlll
      541 etnkigaais eigkiisfkv spdclelraw isiamedyer alrdvrallt lepnymmfhg
      601 kmhgdhlvel lrpfvqqwsq adcwmqlydr wssvddlgsl avvhhmland pgksllwfrq
      661 sllllrlncq kaamrslrla rnhstsdher lvyegwilyd tghceealak aeesisirrs
      721 feafflkaya ladtsldqes sayviqllld alrcpsdglr kgqalnnlgs vyvdcekldl
      781 aadcymnaln ikhtrahqgl arvfhlknqr kaaydemtkl iekarnnasa yekrseysdr
      841 dmaksdlama tqldplrtyp yryraavlmd dhkeneaiae ltralafkpd lqllhlraaf
      901 hdsmgdyast vrdceaalcl epnhadtlel ynkvrelvke q
//
LOCUS       XP_016727717             256 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727717
VERSION     XP_016727717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28583
     Region          6..>159
                     /region_name="DUF688"
                     /note="Protein of unknown function (DUF688); pfam05097"
                     /db_xref="CDD:368284"
     CDS             1..256
                     /gene="LOC107938956"
                     /coded_by="XM_016872228.2:212..982"
                     /db_xref="GeneID:107938956"
ORIGIN      
        1 merkrprkln lnapllstrr pagchvidre vswkdssngi pfcwehapgk pkdsersnnv
       61 deaetprpkp ppgrwrppke attrdyhdeg cdadvddynn dkydvfsdav evlslteaid
      121 ivekteaieh sdldgfnlam slehsdcpsp sfiidrflpd aialaassal nisktklpyi
      181 ysdqsqavmk rtslsspkgc glemllpwrm khklcsvrnp ikersiatnv mppktstkqk
      241 klvpsivaas aewrck
//
LOCUS       XP_016727689             201 aa            linear   PLN 06-AUG-2024
DEFINITION  kinetochore protein SPC24 homolog [Gossypium hirsutum].
ACCESSION   XP_016727689
VERSION     XP_016727689.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..201
                     /product="kinetochore protein SPC24 homolog"
                     /calculated_mol_wt=23742
     Region          <48..>147
                     /region_name="PTZ00266"
                     /note="NIMA-related protein kinase; Provisional"
                     /db_xref="CDD:173502"
     CDS             1..201
                     /gene="LOC107938934"
                     /coded_by="XM_016872200.2:241..846"
                     /db_xref="GeneID:107938934"
ORIGIN      
        1 mgestrmidv eklisysddl vevlkdkrdi nsltqcfqhf ndlrshcdad snevhrllre
       61 yeekieackk kteqakleva dgaemeylqk eyqeeleker glkeelravs neiielerqr
      121 vsieerkknl rkyeqdklke qrklsmyasi tniipdledq srisghivdr dkkvikkfef
      181 dtskmtafda cdslwkmins r
//
LOCUS       XP_016727733             509 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIC 56, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016727733
VERSION     XP_016727733.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727733.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..509
                     /product="protein TIC 56, chloroplastic"
                     /calculated_mol_wt=59455
     Region          241..291
                     /region_name="GYF_2"
                     /note="GYF domain 2; pfam14237"
                     /db_xref="CDD:464112"
     CDS             1..509
                     /gene="LOC107938965"
                     /coded_by="XM_016872244.2:280..1809"
                     /db_xref="GeneID:107938965"
ORIGIN      
        1 masikfdafe swfrkpqnpi qpinllsltq sflpttssns pnfasisssg ffsrkpkkpg
       61 ldsdkpgpyk qmvdqffwec enlpdyrhtp evenflnedp ffenkenpte delkenekww
      121 qdfrgspvvq flaraeeiad einrielken eepfrkedkk lwqavphvig ldgrpmprka
      181 iktreesddk fwdftkqfff glwgfrqrpy ppgrpidvaq aigykrlekr yydfimrsgg
      241 wyykdrlgrt rgpcelitlk tawgggiidk htfiwgedmd ewapihmvyg lepaiatwev
      301 rlgaaatafl hklqkgipsw vplkgheekt ykqlqeeaie skrcdlavlk andgiwpgvr
      361 ipshalflwa sgsemttlle sdhmpnkyis kdlrrklakv ipglrpwevl sveqamddit
      421 ysgewyrepl gtyttgppyi rhwnkdvkri frifynlsrq vynklertip gfnaimekvq
      481 adanaretrr rekreaqkkv kdaaiynpr
//
LOCUS       XP_016727697             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g01610 [Gossypium hirsutum].
ACCESSION   XP_016727697
VERSION     XP_016727697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..170
                     /product="uncharacterized protein At5g01610"
                     /calculated_mol_wt=18899
     Region          55..158
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..170
                     /gene="LOC107938942"
                     /coded_by="XM_016872208.2:357..869"
                     /db_xref="GeneID:107938942"
ORIGIN      
        1 mdqvlnkvgt mwvghqadkr lgsvgneidq isnsieggak wlvntikgkv qkplpellke
       61 ydlpigifpr datnyeldee tgkltvhlps iceieyrdss vlrffttvtg hlvkrkladi
      121 egmktkmilw ikvscitsdg sklyvsagit ktrnrdayev nkdgigvdkf
//
LOCUS       XP_016727738             415 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 34 [Gossypium hirsutum].
ACCESSION   XP_016727738
VERSION     XP_016727738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..415
                     /product="protein trichome birefringence-like 34"
                     /calculated_mol_wt=48418
     Region          67..120
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          121..410
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..415
                     /gene="LOC107938970"
                     /coded_by="XM_016872249.2:123..1370"
                     /db_xref="GeneID:107938970"
ORIGIN      
        1 makkqqqqhq vmqqvpsvgg irssfqtlva lliailvvat iyirqsneql fqywttydkt
       61 inglssscnl fagkwvfdnr syplykekec tfmsdqlace kfgrkdlkyq fwrwqphqcd
      121 lprfnatall eklrnkrlvy vgdslnrnqw vsmvclvdsv isptfksmhn ngsinifkai
      181 eynatiefyw spllvesnsd dpishrvpdr ivrvqaiekh arhwtdadyl vfntylwwrr
      241 rqmkvlwgsf espedgvyka vklprvyema lqtwaqwlev hvdrnktqlf fmsmspthqk
      301 ankwggikge ncysetepvt eegyagdgas prmmhvvdsv lgelktrgln vqminitqls
      361 dyrkdghpsi yrkhwetite eqllnpknys dcihwclpgv pdvwnellya cilel
//
LOCUS       XP_016727740             181 aa            linear   PLN 06-AUG-2024
DEFINITION  abscisic acid receptor PYL4 [Gossypium hirsutum].
ACCESSION   XP_016727740
VERSION     XP_016727740.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872251.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727740.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..181
                     /product="abscisic acid receptor PYL4"
                     /calculated_mol_wt=19764
     Region          32..175
                     /region_name="PYR_PYL_RCAR_like"
                     /note="Pyrabactin resistance 1 (PYR1), PYR1-like (PYL),
                     regulatory component of abscisic acid receptors (RCARs),
                     and related proteins; cd07821"
                     /db_xref="CDD:176863"
     Site            order(34,36,38,47..49,51..52,61,63,67,78,80,82,84,93,95,
                     97,100,107,109,111,118,121..123,125,127,138,140,142,144,
                     155..159,161..163,165..167,170)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176863"
     Site            order(62..63,65,85..86,117..118,154..155,157..158,161,165)
                     /site_type="other"
                     /note="protein interface [polypeptide binding]"
                     /db_xref="CDD:176863"
     Site            order(85..86,91)
                     /site_type="other"
                     /note="gate"
                     /db_xref="CDD:176863"
     CDS             1..181
                     /gene="LOC107938971"
                     /coded_by="XM_016872251.2:240..785"
                     /db_xref="GeneID:107938971"
ORIGIN      
        1 mlyqkrypit ytmpvpdava rhhihpvgpn qccsavvqqi aapvstvwsv vrrfdnpqay
       61 khfvkschvi vgdgdvgtlr evhvisglpa arsterleil deeshvlsfs viggehrlan
      121 yrsvttlhps tngngtvvve syvvdvppgn teddtcvfvd tivrcnlhsl aqiaenlasr
      181 k
//
LOCUS       XP_016727711             545 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 44, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016727711
VERSION     XP_016727711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..545
                     /product="protein DETOXIFICATION 44, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=57713
     Region          119..528
                     /region_name="MATE_DinF_like"
                     /note="DinF and similar proteins, a subfamily of the
                     multidrug and toxic compound extrusion (MATE)-like
                     proteins; cd13136"
                     /db_xref="CDD:240541"
     CDS             1..545
                     /gene="LOC107938951"
                     /coded_by="XM_016872222.2:237..1874"
                     /db_xref="GeneID:107938951"
ORIGIN      
        1 maatatishf lskfdvakhp fhsshklarn rssslcirpn sskhsnssts letspqqqqq
       61 prkpqspipp kpvnvpesnp svslfdrlrd gfkidelgle ilsialpaal alaadpiasl
      121 vdtafvghlg svelaavgvs vsifnlvskl fnvpllnitt sfvaeeqali skskddgefe
      181 hqgkkvlpsv stslalaagl giaeavvlsv gsgflmnimg ipmdssmrgp aeqfltwraf
      241 gappvviala aqgtfrgfkd tktplyaiga gtllnaildv ilifpfgfgv ggaavatvis
      301 eyliaiillw elngkvelis pkidwskvsl yfksggllig rtiatlgtlt latslaarqg
      361 pitmaghqic vqiwlavsll tdalalsgqa llatnysqan yqqarkvifs vlkiglatgf
      421 plavflfigf ealsglfttd aevlqiawsg tlfvagsqpv navafvldgl yygvsdyeya
      481 avsmvvvgli ssafllvaap lfsvggvwtg lflfmtlrvv agfwrlgtks gpwkmiycdm
      541 ekekg
//
LOCUS       XP_016727712             542 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 44, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016727712
VERSION     XP_016727712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..542
                     /product="protein DETOXIFICATION 44, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=57381
     Region          119..525
                     /region_name="MATE_DinF_like"
                     /note="DinF and similar proteins, a subfamily of the
                     multidrug and toxic compound extrusion (MATE)-like
                     proteins; cd13136"
                     /db_xref="CDD:240541"
     CDS             1..542
                     /gene="LOC107938951"
                     /coded_by="XM_016872223.2:243..1871"
                     /db_xref="GeneID:107938951"
ORIGIN      
        1 maatatishf lskfdvakhp fhsshklarn rssslcirpn sskhsnssts letspqqqqq
       61 prkpqspipp kpvnvpesnp svslfdrlrd gfkidelgle ilsialpaal alaadpiasl
      121 vdtafvghlg svelaavgvs vsifnlvskl fnvpllnitt sfvaeeqali skngefehqg
      181 kkvlpsvsts lalaaglgia eavvlsvgsg flmnimgipm dssmrgpaeq fltwrafgap
      241 pvvialaaqg tfrgfkdtkt plyaigagtl lnaildvili fpfgfgvgga avatviseyl
      301 iaiillweln gkvelispki dwskvslyfk sgglligrti atlgtltlat slaarqgpit
      361 maghqicvqi wlavslltda lalsgqalla tnysqanyqq arkvifsvlk iglatgfpla
      421 vflfigfeal sglfttdaev lqiawsgtlf vagsqpvnav afvldglyyg vsdyeyaavs
      481 mvvvglissa fllvaaplfs vggvwtglfl fmtlrvvagf wrlgtksgpw kmiycdmeke
      541 kg
//
LOCUS       XP_016727713             310 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727713
VERSION     XP_016727713.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727713.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33975
     Region          6..306
                     /region_name="Abraxas_plant"
                     /note="BRISC complex subunit Abro1-like protein in plants;
                     cd23656"
                     /db_xref="CDD:467806"
     Site            order(12,14,16..18,20..21,24..26,29,64..68,70,72..73,89,
                     102,104..110,112..115,117,153,157..164,178..179,182,
                     184..191,193..198,200,222..224,228,260..261,264..265,
                     267..268,271..272,274..276,278..279,282..283,285..290,
                     292..293,295..296,299..300,302..303,306)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467806"
     Site            184
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467806"
     CDS             1..310
                     /gene="LOC107938952"
                     /coded_by="XM_016872224.2:830..1762"
                     /db_xref="GeneID:107938952"
ORIGIN      
        1 mddlvlhkla isgpalssmi qrlssspadv dgllfghvty iapstlsdes aqsssdsqlv
       61 atisgflcfp sllsfydslg rvdssrlspt hlnhkpligw fssrrktplr psmrefsvtr
      121 slsstpnlsl piqnadfnsl fapsifllft tplhdqciqt nqyrafqfrs skpsfnplsi
      181 divnigpafr ghygsfspns tlpflncdlr nltamnedrn eenvtgtket ekdqalldtc
      241 aegmqvgrls lligpgatny tagledlygk mlskieslar lvetssakvl eqenlnrklr
      301 ykvarstgve
//
LOCUS       XP_016727714             310 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727714
VERSION     XP_016727714.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727714.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33975
     Region          6..306
                     /region_name="Abraxas_plant"
                     /note="BRISC complex subunit Abro1-like protein in plants;
                     cd23656"
                     /db_xref="CDD:467806"
     Site            order(12,14,16..18,20..21,24..26,29,64..68,70,72..73,89,
                     102,104..110,112..115,117,153,157..164,178..179,182,
                     184..191,193..198,200,222..224,228,260..261,264..265,
                     267..268,271..272,274..276,278..279,282..283,285..290,
                     292..293,295..296,299..300,302..303,306)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467806"
     Site            184
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467806"
     CDS             1..310
                     /gene="LOC107938952"
                     /coded_by="XM_016872225.2:746..1678"
                     /db_xref="GeneID:107938952"
ORIGIN      
        1 mddlvlhkla isgpalssmi qrlssspadv dgllfghvty iapstlsdes aqsssdsqlv
       61 atisgflcfp sllsfydslg rvdssrlspt hlnhkpligw fssrrktplr psmrefsvtr
      121 slsstpnlsl piqnadfnsl fapsifllft tplhdqciqt nqyrafqfrs skpsfnplsi
      181 divnigpafr ghygsfspns tlpflncdlr nltamnedrn eenvtgtket ekdqalldtc
      241 aegmqvgrls lligpgatny tagledlygk mlskieslar lvetssakvl eqenlnrklr
      301 ykvarstgve
//
LOCUS       XP_040943707             310 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943707
VERSION     XP_040943707.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087773.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..310
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33975
     Region          6..306
                     /region_name="Abraxas_plant"
                     /note="BRISC complex subunit Abro1-like protein in plants;
                     cd23656"
                     /db_xref="CDD:467806"
     Site            order(12,14,16..18,20..21,24..26,29,64..68,70,72..73,89,
                     102,104..110,112..115,117,153,157..164,178..179,182,
                     184..191,193..198,200,222..224,228,260..261,264..265,
                     267..268,271..272,274..276,278..279,282..283,285..290,
                     292..293,295..296,299..300,302..303,306)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467806"
     Site            184
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467806"
     CDS             1..310
                     /gene="LOC107938952"
                     /coded_by="XM_041087773.1:830..1762"
                     /db_xref="GeneID:107938952"
ORIGIN      
        1 mddlvlhkla isgpalssmi qrlssspadv dgllfghvty iapstlsdes aqsssdsqlv
       61 atisgflcfp sllsfydslg rvdssrlspt hlnhkpligw fssrrktplr psmrefsvtr
      121 slsstpnlsl piqnadfnsl fapsifllft tplhdqciqt nqyrafqfrs skpsfnplsi
      181 divnigpafr ghygsfspns tlpflncdlr nltamnedrn eenvtgtket ekdqalldtc
      241 aegmqvgrls lligpgatny tagledlygk mlskieslar lvetssakvl eqenlnrklr
      301 ykvarstgve
//
LOCUS       XP_016727715             215 aa            linear   PLN 06-AUG-2024
DEFINITION  PRA1 family protein B4 [Gossypium hirsutum].
ACCESSION   XP_016727715
VERSION     XP_016727715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..215
                     /product="PRA1 family protein B4"
                     /calculated_mol_wt=23203
     Region          42..183
                     /region_name="PRA1"
                     /note="PRA1 family protein; pfam03208"
                     /db_xref="CDD:460846"
     CDS             1..215
                     /gene="LOC107938953"
                     /coded_by="XM_016872226.2:111..758"
                     /db_xref="GeneID:107938953"
ORIGIN      
        1 mstavppvip vssvqsvesq ppaaspafls fvsrlneslr nglsqrrpwa elvdrsafsk
       61 pesfsdalvr vrknysyfrv nylsviglil afsllshpfs lllllgllcs wiflylfrpa
      121 dqplilfgrt fsdretlgfl iifsvfvvfl ttvgsllisa lmvgvglvca hgafrapedl
      181 fldeqeqvst gflsflggaa tnvavaaapa vaarv
//
LOCUS       XP_016727737             115 aa            linear   PLN 06-AUG-2024
DEFINITION  macrophage migration inhibitory factor homolog [Gossypium
            hirsutum].
ACCESSION   XP_016727737
VERSION     XP_016727737.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727737.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..115
                     /product="macrophage migration inhibitory factor homolog"
                     /calculated_mol_wt=12016
     Region          1..115
                     /region_name="4Oxalocrotonate_Tautomerase"
                     /note="4-Oxalocrotonate Tautomerase: Catalyzes the
                     isomerization of unsaturated ketones. The structure is a
                     homohexamer that is arranged as a trimer of dimers. The
                     hexamer contains six active sites, each formed by residues
                     from three monomers, two from one...; cl00235"
                     /db_xref="CDD:444774"
     CDS             1..115
                     /gene="LOC107938969"
                     /coded_by="XM_016872248.2:546..893"
                     /db_xref="GeneID:107938969"
ORIGIN      
        1 mpclnlstnv nldgvdtsai lseatssvak ligkpeayvm ivlkgsvpms fggteqpaay
       61 gelvsiggln pdvnkklsaa iaailetklq vpksrfflkf ydtkgsnfgw ngstf
//
LOCUS       XP_016727698            1515 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCAR2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727698
VERSION     XP_016727698.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727698.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1515
                     /product="protein SCAR2 isoform X1"
                     /calculated_mol_wt=166383
     Region          <375..722
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..1515
                     /gene="LOC107938943"
                     /coded_by="XM_016872209.2:232..4779"
                     /db_xref="GeneID:107938943"
ORIGIN      
        1 mpltryqirn eysladpeiy rasekddpea llegvamagl vgvlrqlgdl aefaaeifhd
       61 lhedvmataa rghglmvrvr qleaefpsie kpflsqtnhs lfftnaagvd whpnlrtehn
      121 litrgdlprc vldsyeecrg pprlflldkf dvagagaclk rytdpsffka esafpgiepv
      181 egqrekkark vkvpkgkkrn kkgsrwrneg tpefalasha klhqlflqer ienvyndpvc
      241 lvklkrrqln efpldpksgk symekfletp spehkavyet sgvpqplrlt skhssesgle
      301 iheiskespv knssigkeis sssptvlvqk ssveklneev idreivevse ptgnftdkip
      361 lplhketvek eiivdgegrk ecgtdgdhsd dmisevdnyt daltnmdsem dtdneyrskn
      421 diafinvgkc qtgshaneek levqahssds qsfgissesd dgnssfkkgr ssfsnsdsmd
      481 nlaedmvsdg eeaaklspsi knhvpeivee spiqlpacse mhhsssdkvl ppkdtgecrl
      541 pdhgevsdss sledfnsahv lldqanymaa sflekkldev psnivttnsd lsdsddgeyf
      601 adssevicag ssekqevslt tlsadeslpq eeldsggtni ssdalphlsn ilqlasekrr
      661 gndpsdevvk tdfirescee nsvnqitdsr ypitspteqh pcstlgeier dagitlppeg
      721 sdvmepvsla yevndatlea alnleymipm pntsetfgfn eqkhsdilpd dpnsmvvgas
      781 fhekehnfne sfdasegeet refpcsvdsv egdanlsvlp shvadnldik dhvslddlat
      841 gnalaesvvv staacgsadf ddavdnttfq tsnligsasg nlmyleesps gdgdlcqeel
      901 esnevisqgc ltgletreet npvegapadi vstscesvsh ncsnleddsq hlslvqptkn
      961 rltsidltat ptslelsnqe sesknlsklm erradmvssp shclsekets feqsldfptn
     1021 qhdmgsldiv edgsnishll snqiqnsfth snqgfsskps lefsqqsgwq skqerypsgs
     1081 ihpafgllpe atkvsmeemp plpplppmqw rlgriqhvsp asqrelveqg qgsfpvmpqc
     1141 rtdgklqfgl salekanerp rnpflpivdg eersdhvsnq lavdcmqlpg pfskhppamg
     1201 sdtnsqfsdt wldrthsnpy ytlpvisnks iecdsialed drvestyssl mpatdttsrh
     1261 itivssheki thppdqfvpd igleggayqh peqnsrreer nlpnisvplp vkreehipsk
     1321 vvedlsmeve qqfptkveeq pqhglavseg essqisnaiv khglaspevd iaqtsnttaq
     1381 helsisegaa vwpsitlals pvvedensng nptvklprpr nplidavaah dksklrkvte
     1441 rihppvipkv derdslleqi rtksfnlkpa vvtrpsiqgp ktnlrvaail ekanairqal
     1501 agsdeddded swsds
//
LOCUS       XP_016727699            1514 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCAR2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727699
VERSION     XP_016727699.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727699.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1514
                     /product="protein SCAR2 isoform X2"
                     /calculated_mol_wt=166312
     Region          <374..721
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..1514
                     /gene="LOC107938943"
                     /coded_by="XM_016872210.2:232..4776"
                     /db_xref="GeneID:107938943"
ORIGIN      
        1 mpltryqirn eysladpeiy rasekddpea llegvamagl vgvlrqlgdl aefaaeifhd
       61 lhedvmataa rghglmvrvr qleaefpsie kpflsqtnhs lfftnagvdw hpnlrtehnl
      121 itrgdlprcv ldsyeecrgp prlflldkfd vagagaclkr ytdpsffkae safpgiepve
      181 gqrekkarkv kvpkgkkrnk kgsrwrnegt pefalashak lhqlflqeri envyndpvcl
      241 vklkrrqlne fpldpksgks ymekfletps pehkavyets gvpqplrlts khssesglei
      301 heiskespvk nssigkeiss ssptvlvqks sveklneevi dreivevsep tgnftdkipl
      361 plhketveke iivdgegrke cgtdgdhsdd misevdnytd altnmdsemd tdneyrsknd
      421 iafinvgkcq tgshaneekl evqahssdsq sfgissesdd gnssfkkgrs sfsnsdsmdn
      481 laedmvsdge eaaklspsik nhvpeivees piqlpacsem hhsssdkvlp pkdtgecrlp
      541 dhgevsdsss ledfnsahvl ldqanymaas flekkldevp snivttnsdl sdsddgeyfa
      601 dssevicags sekqevsltt lsadeslpqe eldsggtnis sdalphlsni lqlasekrrg
      661 ndpsdevvkt dfiresceen svnqitdsry pitspteqhp cstlgeierd agitlppegs
      721 dvmepvslay evndatleaa lnleymipmp ntsetfgfne qkhsdilpdd pnsmvvgasf
      781 hekehnfnes fdasegeetr efpcsvdsve gdanlsvlps hvadnldikd hvslddlatg
      841 nalaesvvvs taacgsadfd davdnttfqt snligsasgn lmyleespsg dgdlcqeele
      901 snevisqgcl tgletreetn pvegapadiv stscesvshn csnleddsqh lslvqptknr
      961 ltsidltatp tslelsnqes esknlsklme rradmvssps hclseketsf eqsldfptnq
     1021 hdmgsldive dgsnishlls nqiqnsfths nqgfsskpsl efsqqsgwqs kqerypsgsi
     1081 hpafgllpea tkvsmeempp lpplppmqwr lgriqhvspa sqrelveqgq gsfpvmpqcr
     1141 tdgklqfgls alekanerpr npflpivdge ersdhvsnql avdcmqlpgp fskhppamgs
     1201 dtnsqfsdtw ldrthsnpyy tlpvisnksi ecdsialedd rvestysslm patdttsrhi
     1261 tivsshekit hppdqfvpdi gleggayqhp eqnsrreern lpnisvplpv kreehipskv
     1321 vedlsmeveq qfptkveeqp qhglavsege ssqisnaivk hglaspevdi aqtsnttaqh
     1381 elsisegaav wpsitlalsp vvedensngn ptvklprprn plidavaahd ksklrkvter
     1441 ihppvipkvd erdslleqir tksfnlkpav vtrpsiqgpk tnlrvaaile kanairqala
     1501 gsdedddeds wsds
//
LOCUS       XP_016727700            1507 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCAR2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016727700
VERSION     XP_016727700.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727700.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1507
                     /product="protein SCAR2 isoform X3"
                     /calculated_mol_wt=165475
     Region          <367..714
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..1507
                     /gene="LOC107938943"
                     /coded_by="XM_016872211.2:232..4755"
                     /db_xref="GeneID:107938943"
ORIGIN      
        1 mpltryqirn eysladpeiy rasekddpea llegvamagl vgvlrqlgdl aefaaeifhd
       61 lhedvmataa rghglmvrvr qleaefpsie kpflsqtnhs lfftnaagvd whpnlrtehn
      121 litrgdlprc vldsyeecrg pprlflldkf dvagagaclk rytdpsffka esafpgiepv
      181 egqrekkark vkkkgsrwrn egtpefalas haklhqlflq erienvyndp vclvklkrrq
      241 lnefpldpks gksymekfle tpspehkavy etsgvpqplr ltskhssesg leiheiskes
      301 pvknssigke issssptvlv qkssveklne evidreivev septgnftdk iplplhketv
      361 ekeiivdgeg rkecgtdgdh sddmisevdn ytdaltnmds emdtdneyrs kndiafinvg
      421 kcqtgshane eklevqahss dsqsfgisse sddgnssfkk grssfsnsds mdnlaedmvs
      481 dgeeaaklsp siknhvpeiv eespiqlpac semhhsssdk vlppkdtgec rlpdhgevsd
      541 sssledfnsa hvlldqanym aasflekkld evpsnivttn sdlsdsddge yfadssevic
      601 agssekqevs lttlsadesl pqeeldsggt nissdalphl snilqlasek rrgndpsdev
      661 vktdfiresc eensvnqitd srypitspte qhpcstlgei erdagitlpp egsdvmepvs
      721 layevndatl eaalnleymi pmpntsetfg fneqkhsdil pddpnsmvvg asfhekehnf
      781 nesfdasege etrefpcsvd svegdanlsv lpshvadnld ikdhvslddl atgnalaesv
      841 vvstaacgsa dfddavdntt fqtsnligsa sgnlmylees psgdgdlcqe elesnevisq
      901 gcltgletre etnpvegapa divstscesv shncsnledd sqhlslvqpt knrltsidlt
      961 atptslelsn qesesknlsk lmerradmvs spshclseke tsfeqsldfp tnqhdmgsld
     1021 ivedgsnish llsnqiqnsf thsnqgfssk pslefsqqsg wqskqeryps gsihpafgll
     1081 peatkvsmee mpplpplppm qwrlgriqhv spasqrelve qgqgsfpvmp qcrtdgklqf
     1141 glsalekane rprnpflpiv dgeersdhvs nqlavdcmql pgpfskhppa mgsdtnsqfs
     1201 dtwldrthsn pyytlpvisn ksiecdsial eddrvestys slmpatdtts rhitivsshe
     1261 kithppdqfv pdigleggay qhpeqnsrre ernlpnisvp lpvkreehip skvvedlsme
     1321 veqqfptkve eqpqhglavs egessqisna ivkhglaspe vdiaqtsntt aqhelsiseg
     1381 aavwpsitla lspvvedens ngnptvklpr prnplidava ahdksklrkv terihppvip
     1441 kvderdslle qirtksfnlk pavvtrpsiq gpktnlrvaa ilekanairq alagsdeddd
     1501 edswsds
//
LOCUS       XP_016727701            1506 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCAR2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016727701
VERSION     XP_016727701.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727701.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1506
                     /product="protein SCAR2 isoform X4"
                     /calculated_mol_wt=165404
     Region          <366..713
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..1506
                     /gene="LOC107938943"
                     /coded_by="XM_016872212.2:232..4752"
                     /db_xref="GeneID:107938943"
ORIGIN      
        1 mpltryqirn eysladpeiy rasekddpea llegvamagl vgvlrqlgdl aefaaeifhd
       61 lhedvmataa rghglmvrvr qleaefpsie kpflsqtnhs lfftnagvdw hpnlrtehnl
      121 itrgdlprcv ldsyeecrgp prlflldkfd vagagaclkr ytdpsffkae safpgiepve
      181 gqrekkarkv kkkgsrwrne gtpefalash aklhqlflqe rienvyndpv clvklkrrql
      241 nefpldpksg ksymekflet pspehkavye tsgvpqplrl tskhssesgl eiheiskesp
      301 vknssigkei ssssptvlvq kssveklnee vidreivevs eptgnftdki plplhketve
      361 keiivdgegr kecgtdgdhs ddmisevdny tdaltnmdse mdtdneyrsk ndiafinvgk
      421 cqtgshanee klevqahssd sqsfgisses ddgnssfkkg rssfsnsdsm dnlaedmvsd
      481 geeaaklsps iknhvpeive espiqlpacs emhhsssdkv lppkdtgecr lpdhgevsds
      541 ssledfnsah vlldqanyma asflekklde vpsnivttns dlsdsddgey fadssevica
      601 gssekqevsl ttlsadeslp qeeldsggtn issdalphls nilqlasekr rgndpsdevv
      661 ktdfiresce ensvnqitds rypitspteq hpcstlgeie rdagitlppe gsdvmepvsl
      721 ayevndatle aalnleymip mpntsetfgf neqkhsdilp ddpnsmvvga sfhekehnfn
      781 esfdasegee trefpcsvds vegdanlsvl pshvadnldi kdhvslddla tgnalaesvv
      841 vstaacgsad fddavdnttf qtsnligsas gnlmyleesp sgdgdlcqee lesnevisqg
      901 cltgletree tnpvegapad ivstscesvs hncsnledds qhlslvqptk nrltsidlta
      961 tptslelsnq esesknlskl merradmvss pshclseket sfeqsldfpt nqhdmgsldi
     1021 vedgsnishl lsnqiqnsft hsnqgfsskp slefsqqsgw qskqerypsg sihpafgllp
     1081 eatkvsmeem pplpplppmq wrlgriqhvs pasqrelveq gqgsfpvmpq crtdgklqfg
     1141 lsalekaner prnpflpivd geersdhvsn qlavdcmqlp gpfskhppam gsdtnsqfsd
     1201 twldrthsnp yytlpvisnk siecdsiale ddrvestyss lmpatdttsr hitivsshek
     1261 ithppdqfvp digleggayq hpeqnsrree rnlpnisvpl pvkreehips kvvedlsmev
     1321 eqqfptkvee qpqhglavse gessqisnai vkhglaspev diaqtsntta qhelsisega
     1381 avwpsitlal spvvedensn gnptvklprp rnplidavaa hdksklrkvt erihppvipk
     1441 vderdslleq irtksfnlkp avvtrpsiqg pktnlrvaai lekanairqa lagsdeddde
     1501 dswsds
//
LOCUS       XP_016727702             666 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein 3 [Gossypium hirsutum].
ACCESSION   XP_016727702
VERSION     XP_016727702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..666
                     /product="F-box/LRR-repeat protein 3"
                     /calculated_mol_wt=72515
     Region          16..55
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(18..19,21..23,26..27,30,43..45,47,50)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(18,22,25..26,29..30,36,38..39,43..45,47)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          <64..>170
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          76..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          103..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          129..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          154..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          180..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          206..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          209..373
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          230..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          256..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          282..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          307..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          332..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          358..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          410..>552
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          410..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          434..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          460..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          486..510
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          511..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          537..562
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          563..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          587..610
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..666
                     /gene="LOC107938944"
                     /coded_by="XM_016872213.2:81..2081"
                     /db_xref="GeneID:107938944"
ORIGIN      
        1 mkkqkpdnlk gfnafnqlpq eiiftildll nsnpldiksf slacksfyaa eskhrtslkp
       61 lrqehlpsil srypniahlh ltrcsrvsdt clsfvshaca sslrsidlsr thlfsasgll
      121 glalncnnlv eidlsnatel kdsamaavsq aknleklwla rcksvtdlgv gcvavgcrkl
      181 ksiclkwclg vgdlgvglla vkcnhicyld lsylpitskc lspilklqhl edlvlegcfg
      241 idddslavlk hgcnslksld vstcqsishn glsslvsgav glqqltlahg spvtsslads
      301 lkkfsmlqsv kldgclisyd glktignwsa slrelslskc sgvtdeglss ivtrhkdlrk
      361 lditccrkit dvsisritns cnsltslrme sctlvsreaf vligqrchll eeldltdnei
      421 ddkglkyisr csqlsnlklg iclnvtdegl ihigrgcskl leldlyrsve itdsgiiaia
      481 qgcpglemin iayckditdh sllslskcsr lktlesrgcs mitslgltav avgckeltkl
      541 dvkkcpnidd agmlplahfs qnlrqinlsh ssvtdiglls lagisclqni tilhlksltp
      601 tglaavllac ggltkvklqa efkwllphrl vehleargct fqwrdkvlqv eldpkcwklr
      661 ledlmp
//
LOCUS       XP_016727703             408 aa            linear   PLN 06-AUG-2024
DEFINITION  patellin-6 [Gossypium hirsutum].
ACCESSION   XP_016727703
VERSION     XP_016727703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..408
                     /product="patellin-6"
                     /calculated_mol_wt=46676
     Region          53..109
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; pfam03765"
                     /db_xref="CDD:461043"
     Region          131..292
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..408
                     /gene="LOC107938946"
                     /coded_by="XM_016872214.2:469..1695"
                     /db_xref="GeneID:107938946"
ORIGIN      
        1 menphspisi peasrkpykk sfvttlmeaa slrspfkedt yftshlkase kkalqelkdk
       61 lmasygpdge ctmwgiplla edekadvvll kflrardfrv ldsfrmlekc lawrkefkad
      121 svgeedlgfk elegvvaymh gydreghpvc ynaygvfkdk dmyerifgde eklnkflrwr
      181 iqvlergisl lhfkpggins iiqvtdlkdm pkrelrvasn qilslfqdny pemvarkifi
      241 nvpwyfsvly smfgpfltqr tkskfvisre ghaaetlykf irpedvpvqy gglsrpndlq
      301 kpaseftvkg gekvniqieg ieagatitwd lvvggwdley saefvpnked sytiavekpr
      361 klspteeair nsytskesgk lvlsvdntss rrkkvaayry tvrkstle
//
LOCUS       XP_016727705             247 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 4B1 [Gossypium hirsutum].
ACCESSION   XP_016727705
VERSION     XP_016727705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872216.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..247
                     /product="CASP-like protein 4B1"
                     /calculated_mol_wt=27487
     Region          96..228
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..247
                     /gene="LOC107938947"
                     /coded_by="XM_016872216.2:178..921"
                     /db_xref="GeneID:107938947"
ORIGIN      
        1 mphmnefpsl prqlseltya elsvsgtkrn knnvsqspvs fifllilvpk spififgsqm
       61 msnpveptki ddagsnsnve nptpavsain rrwkredlmn kgslflrgla fffsllsfii
      121 masnkhggwk ifdryseyry llaiaalsil ytggqawrqv lsiwknnnil eqrisamldf
      181 fgdqmvayll isstsaaipl tnnmregqdn iftdasasal smsffaflsl alsamvsgyk
      241 lstqsyi
//
LOCUS       XP_016727688             306 aa            linear   PLN 06-AUG-2024
DEFINITION  short-chain dehydrogenase reductase 2a [Gossypium hirsutum].
ACCESSION   XP_016727688
VERSION     XP_016727688.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727688.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="short-chain dehydrogenase reductase 2a"
                     /calculated_mol_wt=32483
     Region          31..298
                     /region_name="secoisolariciresinol-DH_like_SDR_c"
                     /note="secoisolariciresinol dehydrogenase
                     (secoisolariciresinol-DH)-like, classical (c) SDRs;
                     cd05326"
                     /db_xref="CDD:187587"
     Site            order(41,44..46,65..66,87..89,115..118,142,169..171,184,
                     188,214..217)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187587"
     Site            order(92,127..129,131..133,136..137,140,144..145,148..149,
                     152,155..156,159,176..177,182,185..186,189..190,193..194,
                     196..198,200..201)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187587"
     Site            order(119..120,171..172,179..181,184,214..216,297)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187587"
     Site            order(143,171,184,188)
                     /site_type="active"
                     /db_xref="CDD:187587"
     CDS             1..306
                     /gene="LOC107938933"
                     /coded_by="XM_016872199.2:425..1345"
                     /db_xref="GeneID:107938933"
ORIGIN      
        1 mtmppqvipd ktlqglyglg rennssphpr rlegkvaivt ggargigeat vrlfarhgak
       61 vviadvedtl gtalanslsp cvtfvhcdvs leedienlvs stvsrygrld ilfnnagvlg
      121 nqrkhksivd fdvdefdnim rvnvrgmalg ikhaaramip rgggciista svagvmgglg
      181 phaytaskha ivgltknaac elgrygirvn cispfgvatp mlvnawrshd deeeetgfnf
      241 gipcqqetek teefvrglan lkgptlrakd iaeaalylag deskyvsghn lvvdggvtts
      301 rncvgl
//
LOCUS       XP_016727694             157 aa            linear   PLN 06-AUG-2024
DEFINITION  senescence associated gene 20 [Gossypium hirsutum].
ACCESSION   XP_016727694
VERSION     XP_016727694.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727694.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..157
                     /product="senescence associated gene 20"
                     /calculated_mol_wt=18173
     Region          18..>88
                     /region_name="DUF4440"
                     /note="Domain of unknown function (DUF4440); pfam14534"
                     /db_xref="CDD:434023"
     Region          58..157
                     /region_name="WI12"
                     /note="Wound-induced protein WI12; cl42057"
                     /db_xref="CDD:477929"
     CDS             1..157
                     /gene="LOC107938937"
                     /coded_by="XM_016872205.2:326..799"
                     /db_xref="GeneID:107938937"
ORIGIN      
        1 meskkneamv snpemqnkai vdtlykalah gdtstvvkll ttdlewwfhg pprchhmmrm
       61 ltgesshref rfeprsievv gdcviaegwe gaqvywvhvw tlkdglitqf reyfntwltv
      121 rdvkpprwei gsdnhtlwqs qprdlarrsl pglllai
//
LOCUS       XP_016727732             480 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016727732
VERSION     XP_016727732.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727732.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..480
                     /product="pentatricopeptide repeat-containing protein
                     At2g38420, mitochondrial"
                     /calculated_mol_wt=54630
     Region          72..99
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          107..134
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          140..170
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <178..>415
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          178..205
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          254..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          285..312
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          320..347
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          353..382
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          388..417
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          423..452
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..480
                     /gene="LOC107938964"
                     /coded_by="XM_016872243.2:504..1946"
                     /db_xref="GeneID:107938964"
ORIGIN      
        1 marrspnffl rkhrkwplis shktkwrqaf tqnqpmvsfk qlvarhnplq pdfvpsllqs
       61 lslynlhqsp qayhfliktl lhnrqfhhip sllhhlqlqh fqtpeyifth lvkfygnanr
      121 ipdavdifyr ipqfrcfpsa yslnallall crsqrglkll pqvllnslhm nirleestfr
      181 llvctlcrmn kvayaieilq rmlddglgvn dkvfsfvlss vsaegdldge dvigfwrglr
      241 klgfspamgd ydgvvrflvk kgrgldawdv lnqmksdgik pgiisytmvl ngvtaegdyi
      301 ladelfdell mlglvpnvyt ykayidalck qnkveegikm vacmeelgck pnvliyntll
      361 rtiskageis rarelvkemk ykgiemnwvs ytiiidglvs ngeileacal veevlhkcif
      421 iksltfdevi cglcqrglvc kalellgkmv ersispgarv wealllsses rpkfhlvipl
//
LOCUS       XP_016727727             184 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727727
VERSION     XP_016727727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..184
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20658
     Region          88..144
                     /region_name="DUF1685"
                     /note="Protein of unknown function (DUF1685); pfam07939"
                     /db_xref="CDD:462321"
     CDS             1..184
                     /gene="LOC107938960"
                     /coded_by="XM_016872238.2:250..804"
                     /db_xref="GeneID:107938960"
ORIGIN      
        1 mvgfssqtes wvatrnsiye sqkeadsfel dlkrldliki dqedennnin sqdkisttkk
       61 nkkknqvlle gyveavdeed elkrtksltg ddldelkgcl dlgfgfsyee ipelcntlpa
      121 lelcysmsqk ylddhqhhas pdttaapepv anwkisspgd hpedvkarlk fwaqavactv
      181 klcn
//
LOCUS       XP_016727707            1184 aa            linear   PLN 06-AUG-2024
DEFINITION  isoleucine--tRNA ligase, cytoplasmic [Gossypium hirsutum].
ACCESSION   XP_016727707
VERSION     XP_016727707.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872218.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727707.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1184
                     /product="isoleucine--tRNA ligase, cytoplasmic"
                     /calculated_mol_wt=134922
     Region          3..1178
                     /region_name="PLN02882"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215477"
     CDS             1..1184
                     /gene="LOC107938948"
                     /coded_by="XM_016872218.2:198..3752"
                     /db_xref="GeneID:107938948"
ORIGIN      
        1 meevcegkdf sfpsqeehil sywsqidafk gqlartqnlp eyifydgppf atglphyghi
       61 lagtikdivt rfqsmtghhv trrfgwdchg lpveneidrk lgikrrdqil emgidkynee
      121 crsivtryve ewetiitrtg rwidfkndyk tmdlkfmesv wwvfaqlyqk gliykgfkvm
      181 pystgcktpl snfeagenyk lvpdpeimva fpivgdpdna afvawtttpw tlpsnlalcv
      241 nanfvyvkvr nkysgkiyvv aesrlselpt ekpkpnaang psgdskksks kgssgektkd
      301 saadsfevle kfsgaslvgk kyeplfnyfl efsdaafrvi adnyvtddsg tgivhcapaf
      361 geddyrvcig nqiinkgenl ivavdddgcf tgkitdfsgc yvkdadkdii ealkaksrlv
      421 kqgtfthsyp fcwrsdtpli yravpswfvr veqlkeqlld nnkqtywvpd yvkdkrfhnw
      481 lenardwais rsrfwgtpip vwisedgeev ivmdsvekle rlsgakvfdl hrhnidhitv
      541 pssrgpefgm lrriddvfdc wfesgsmpya yihypfenve lfeknfpghf vaegldqtrg
      601 wfytlmvlst alfgkpafrn licnglvlae dgkkmskrlk nypspmevin dygadalrly
      661 linspvvrae tlrfkkdgvf gvvkdvflpw ynayrflvqn akrleyegsa pfvpiavavi
      721 qkssnvldqw insatqslvh fvreemdayr lytvvpyllk fldnltniyv rfnrkrlkgr
      781 tgeedcrmal stlynvllts ckvmapftpf ftevlyqnmr kicdgaeesi hycsfpqeeg
      841 krgerieesv armmkiidla rnirerhnkp lktplremvv vhpdedflgd ivgklreyvl
      901 eelnirslvt ckdtlkyasi raepdfsvlg krlgkamgav akeikamsqe dilaltkage
      961 vtiathclkl teiklvrefk hpdgmtdkem daagdgdvlv vldirpdesl feagvarevv
     1021 nriqksrkka gleptdmvev yfesldedks viqqvlnsqe nyikdaigsp llsfdimplh
     1081 avvlseeifh giynmsfkis lvrpalvfka nsilalyagn skfaqglqiy llsrdhsclk
     1141 sefqlgrgki kvdcienlaa vevklgehvf ltvgdyylte rksh
//
LOCUS       XP_040943709             498 aa            linear   PLN 06-AUG-2024
DEFINITION  inactive glucose-1-phosphate adenylyltransferase small subunit 2,
            chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943709
VERSION     XP_040943709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087775.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..498
                     /product="inactive glucose-1-phosphate adenylyltransferase
                     small subunit 2, chloroplastic isoform X1"
                     /calculated_mol_wt=55358
     Region          68..498
                     /region_name="PLN02241"
                     /note="glucose-1-phosphate adenylyltransferase"
                     /db_xref="CDD:215133"
     CDS             1..498
                     /gene="LOC107938949"
                     /coded_by="XM_041087775.1:861..2357"
                     /db_xref="GeneID:107938949"
ORIGIN      
        1 mpqtslmmtl qfsssgtpvn vqakhflipg lgrydhkysp klpskfpkts ifnshqipnp
       61 ilhqppvnqs vaaivfgdgs esrlypltkr rsegaipias nyrlidavvs ncinsninki
      121 yaltqfnsts lnshlsrays vaslgkegfv eviaayqspe dqgwfqgtad airrclwvle
      181 eypvaeflvl pghhlykmdy qrvieshrnr ksditivasn gitkrdqdpg vgvlkinten
      241 qvmqyslksn kepvnyavae tltrcndssy syipsmgiyl inratmvnll nnhfpkamdf
      301 gtevirgals lgmkveaylf egywedmrsi eafyqanmec ikklntgyns fcdrdspvyt
      361 iprnlpptvv ndamitdsvi gdgcilnrck ikstvvgmrt kirdgaiied svimgsdvyq
      421 iedgressik stsvpigige nteirkaivd knarigknvk iinkdnveeg dreangyiis
      481 grimvvlrsa eipdnsil
//
LOCUS       XP_016727708             497 aa            linear   PLN 06-AUG-2024
DEFINITION  inactive glucose-1-phosphate adenylyltransferase small subunit 2,
            chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727708
VERSION     XP_016727708.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872219.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727708.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..497
                     /product="inactive glucose-1-phosphate adenylyltransferase
                     small subunit 2, chloroplastic isoform X2"
                     /calculated_mol_wt=55271
     Region          68..497
                     /region_name="PLN02241"
                     /note="glucose-1-phosphate adenylyltransferase"
                     /db_xref="CDD:215133"
     CDS             1..497
                     /gene="LOC107938949"
                     /coded_by="XM_016872219.2:861..2354"
                     /db_xref="GeneID:107938949"
ORIGIN      
        1 mpqtslmmtl qfsssgtpvn vqakhflipg lgrydhkysp klpskfpkts ifnshqipnp
       61 ilhqppvnqs vaaivfgdgs esrlypltkr rsegaipias nyrlidavvs ncinsninki
      121 yaltqfnsts lnshlsrays vaslgkegfv eviaayqspe dqgwfqgtad airrclwvle
      181 eypvaeflvl pghhlykmdy qrvieshrnr ksditivasn gitkrdqdpg vgvlkinten
      241 qvmqyslksn kepvnyavae tltrcndssy syipsmgiyl inratmvnll nnhfpkamdf
      301 gtevirgals lgmkveaylf egywedmrsi eafyqanmec ikklntgynf cdrdspvyti
      361 prnlpptvvn damitdsvig dgcilnrcki kstvvgmrtk irdgaiieds vimgsdvyqi
      421 edgressiks tsvpigigen teirkaivdk narigknvki inkdnveegd reangyiisg
      481 rimvvlrsae ipdnsil
//
LOCUS       XP_040943710             442 aa            linear   PLN 06-AUG-2024
DEFINITION  inactive glucose-1-phosphate adenylyltransferase small subunit 2,
            chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943710
VERSION     XP_040943710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087776.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..442
                     /product="inactive glucose-1-phosphate adenylyltransferase
                     small subunit 2, chloroplastic isoform X3"
                     /calculated_mol_wt=49149
     Region          68..442
                     /region_name="PLN02241"
                     /note="glucose-1-phosphate adenylyltransferase"
                     /db_xref="CDD:215133"
     CDS             1..442
                     /gene="LOC107938949"
                     /coded_by="XM_041087776.1:861..2189"
                     /db_xref="GeneID:107938949"
ORIGIN      
        1 mpqtslmmtl qfsssgtpvn vqakhflipg lgrydhkysp klpskfpkts ifnshqipnp
       61 ilhqppvnqs vaaivfgdgs esrlypltkr rsegaipias nyrlidavvs ncinsninki
      121 yaltqfnsts lnshlsrays vaslgkegfv eviaayqspe dqgwfqgtad airrclwvle
      181 eypvaeflvl pghhlykmdy qrvieshrnr ksditivasn gitkrdqdpg vgvlkinten
      241 qvmqyslksn kepvnyavve aylfegywed mrsieafyqa nmecikklnt gynsfcdrds
      301 pvytiprnlp ptvvndamit dsvigdgcil nrckikstvv gmrtkirdga iiedsvimgs
      361 dvyqiedgre ssikstsvpi gigenteirk aivdknarig knvkiinkdn veegdreang
      421 yiisgrimvv lrsaeipdns il
//
LOCUS       XP_040943711             441 aa            linear   PLN 06-AUG-2024
DEFINITION  inactive glucose-1-phosphate adenylyltransferase small subunit 2,
            chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943711
VERSION     XP_040943711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087777.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..441
                     /product="inactive glucose-1-phosphate adenylyltransferase
                     small subunit 2, chloroplastic isoform X4"
                     /calculated_mol_wt=49062
     Region          68..441
                     /region_name="PLN02241"
                     /note="glucose-1-phosphate adenylyltransferase"
                     /db_xref="CDD:215133"
     CDS             1..441
                     /gene="LOC107938949"
                     /coded_by="XM_041087777.1:861..2186"
                     /db_xref="GeneID:107938949"
ORIGIN      
        1 mpqtslmmtl qfsssgtpvn vqakhflipg lgrydhkysp klpskfpkts ifnshqipnp
       61 ilhqppvnqs vaaivfgdgs esrlypltkr rsegaipias nyrlidavvs ncinsninki
      121 yaltqfnsts lnshlsrays vaslgkegfv eviaayqspe dqgwfqgtad airrclwvle
      181 eypvaeflvl pghhlykmdy qrvieshrnr ksditivasn gitkrdqdpg vgvlkinten
      241 qvmqyslksn kepvnyavve aylfegywed mrsieafyqa nmecikklnt gynfcdrdsp
      301 vytiprnlpp tvvndamitd svigdgciln rckikstvvg mrtkirdgai iedsvimgsd
      361 vyqiedgres sikstsvpig igenteirka ivdknarigk nvkiinkdnv eegdreangy
      421 iisgrimvvl rsaeipdnsi l
//
LOCUS       XP_016727709             373 aa            linear   PLN 06-AUG-2024
DEFINITION  biotin synthase, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016727709
VERSION     XP_016727709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872220.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="biotin synthase, mitochondrial"
                     /calculated_mol_wt=41323
     Region          1..372
                     /region_name="PLN02389"
                     /note="biotin synthase"
                     /db_xref="CDD:215219"
     CDS             1..373
                     /gene="LOC107938950"
                     /coded_by="XM_016872220.2:235..1356"
                     /db_xref="GeneID:107938950"
ORIGIN      
        1 mlsirslstt klvvrscsyy yssstasaaa veaertireg prnvwtrqqi dsiyhsplld
       61 llfhgaqvhr yahnfrevqq ctllsiktgg csedcsycpq ssryhtglkp hklmtkdavm
      121 qaakqakeag strfcmgaaw rdtvgrktnf nqileyvkei rdmgmevcct lgmlekqqal
      181 elkkagltay nhnldtskey ypniittrty derletlqhv reaginvcsg giiglgeave
      241 drvgllhtla tlpthpesvp inalvavkgt plqdqkpvei wemirmiata rivmpksmvr
      301 lsagrvrfsm peqalcflag ansiftgekl lttpnndyda dqvmfkilgl ipkapsftee
      361 eaencdeavs tsg
//
LOCUS       XP_016727722             628 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat-containing protein At5g02620 [Gossypium hirsutum].
ACCESSION   XP_016727722
VERSION     XP_016727722.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727722.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..628
                     /product="ankyrin repeat-containing protein At5g02620"
                     /calculated_mol_wt=69295
     Region          117..154
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          137..391
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          156..190
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          191..222
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          224..257
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(259,261,265..266,269..271,273..274,278,281,291,293,
                     295,299..300,303..305,307..308,312,315,325,327,329,
                     333..334,337..339,341..342,346,349)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          259..291
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          293..325
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          361..391
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          441..553
                     /region_name="PGG"
                     /note="Domain of unknown function; pfam13962"
                     /db_xref="CDD:433609"
     CDS             1..628
                     /gene="LOC107938958"
                     /coded_by="XM_016872233.2:431..2317"
                     /db_xref="GeneID:107938958"
ORIGIN      
        1 mekqqsfkqq ppqgllekqq sfkqsekqqs frgvmtekqp pqrllekqks fkqsekqqsf
       61 rgvssekqps grgmmekqks frgfiekqks frvvmerqls figagerrkn respgkrgds
      121 plhlaartgn lsrvreilhn fnvpeakell akqnlegetp lyvaaengqs lvvaemlkhm
      181 dletasitar ngydpfhvaa kqghvevlke llgtfpnsvm ttdlscttal htaaaqghid
      241 vvnllletds dlakiarnng ktvlhsaarm ghlevvksll skdpstgfrv dkkgqtalhm
      301 avkgqneeiv lellkpdpsv lgledckgnt alhiavmkgr tqivrcllsv esininstnk
      361 agespldiae kignpelvsi lkeagainsk dhgkppnagk qlkqtvsdik hdvqsqlqqt
      421 rqtgfrvqki akrlkklhis glnnainsat vvavliatva faaiftvpgq yvedktkgls
      481 lgqahianka pfivffvfds lalfislavv vvqtsvvvie qkakkqlvfv inklmwlacl
      541 fisvafislt yvvvgkesrw lavcatvigs timlttigsm cyfvilhrme esklrsirka
      601 esrsrsfsms vasdseilnn eykrmyal
//
LOCUS       XP_016727719             628 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat-containing protein At5g02620 [Gossypium hirsutum].
ACCESSION   XP_016727719
VERSION     XP_016727719.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727719.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..628
                     /product="ankyrin repeat-containing protein At5g02620"
                     /calculated_mol_wt=69295
     Region          117..154
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          137..391
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          156..190
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          191..222
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          224..257
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(259,261,265..266,269..271,273..274,278,281,291,293,
                     295,299..300,303..305,307..308,312,315,325,327,329,
                     333..334,337..339,341..342,346,349)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          259..291
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          293..325
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          361..391
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          441..553
                     /region_name="PGG"
                     /note="Domain of unknown function; pfam13962"
                     /db_xref="CDD:433609"
     CDS             1..628
                     /gene="LOC107938958"
                     /coded_by="XM_016872230.2:596..2482"
                     /db_xref="GeneID:107938958"
ORIGIN      
        1 mekqqsfkqq ppqgllekqq sfkqsekqqs frgvmtekqp pqrllekqks fkqsekqqsf
       61 rgvssekqps grgmmekqks frgfiekqks frvvmerqls figagerrkn respgkrgds
      121 plhlaartgn lsrvreilhn fnvpeakell akqnlegetp lyvaaengqs lvvaemlkhm
      181 dletasitar ngydpfhvaa kqghvevlke llgtfpnsvm ttdlscttal htaaaqghid
      241 vvnllletds dlakiarnng ktvlhsaarm ghlevvksll skdpstgfrv dkkgqtalhm
      301 avkgqneeiv lellkpdpsv lgledckgnt alhiavmkgr tqivrcllsv esininstnk
      361 agespldiae kignpelvsi lkeagainsk dhgkppnagk qlkqtvsdik hdvqsqlqqt
      421 rqtgfrvqki akrlkklhis glnnainsat vvavliatva faaiftvpgq yvedktkgls
      481 lgqahianka pfivffvfds lalfislavv vvqtsvvvie qkakkqlvfv inklmwlacl
      541 fisvafislt yvvvgkesrw lavcatvigs timlttigsm cyfvilhrme esklrsirka
      601 esrsrsfsms vasdseilnn eykrmyal
//
LOCUS       XP_016727721             628 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat-containing protein At5g02620 [Gossypium hirsutum].
ACCESSION   XP_016727721
VERSION     XP_016727721.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727721.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..628
                     /product="ankyrin repeat-containing protein At5g02620"
                     /calculated_mol_wt=69295
     Region          117..154
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          137..391
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          156..190
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          191..222
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          224..257
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(259,261,265..266,269..271,273..274,278,281,291,293,
                     295,299..300,303..305,307..308,312,315,325,327,329,
                     333..334,337..339,341..342,346,349)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          259..291
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          293..325
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          361..391
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          441..553
                     /region_name="PGG"
                     /note="Domain of unknown function; pfam13962"
                     /db_xref="CDD:433609"
     CDS             1..628
                     /gene="LOC107938958"
                     /coded_by="XM_016872232.2:469..2355"
                     /db_xref="GeneID:107938958"
ORIGIN      
        1 mekqqsfkqq ppqgllekqq sfkqsekqqs frgvmtekqp pqrllekqks fkqsekqqsf
       61 rgvssekqps grgmmekqks frgfiekqks frvvmerqls figagerrkn respgkrgds
      121 plhlaartgn lsrvreilhn fnvpeakell akqnlegetp lyvaaengqs lvvaemlkhm
      181 dletasitar ngydpfhvaa kqghvevlke llgtfpnsvm ttdlscttal htaaaqghid
      241 vvnllletds dlakiarnng ktvlhsaarm ghlevvksll skdpstgfrv dkkgqtalhm
      301 avkgqneeiv lellkpdpsv lgledckgnt alhiavmkgr tqivrcllsv esininstnk
      361 agespldiae kignpelvsi lkeagainsk dhgkppnagk qlkqtvsdik hdvqsqlqqt
      421 rqtgfrvqki akrlkklhis glnnainsat vvavliatva faaiftvpgq yvedktkgls
      481 lgqahianka pfivffvfds lalfislavv vvqtsvvvie qkakkqlvfv inklmwlacl
      541 fisvafislt yvvvgkesrw lavcatvigs timlttigsm cyfvilhrme esklrsirka
      601 esrsrsfsms vasdseilnn eykrmyal
//
LOCUS       XP_016727735             529 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: poly(ADP-ribose) glycohydrolase 1-like
            [Gossypium hirsutum].
ACCESSION   XP_016727735
VERSION     XP_016727735.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872246.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727735.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..529
                     /product="LOW QUALITY PROTEIN: poly(ADP-ribose)
                     glycohydrolase 1-like"
                     /calculated_mol_wt=59458
     Region          85..480
                     /region_name="PARG_cat"
                     /note="Poly (ADP-ribose) glycohydrolase (PARG); pfam05028"
                     /db_xref="CDD:461528"
     CDS             1..529
                     /gene="LOC107938966"
                     /coded_by="XM_016872246.2:136..1725"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107938966"
ORIGIN      
        1 medsaelesi lpylplvigs srrllwpskv vealeamsrg pdhslvncge vlsiaisdmr
       61 aslsladpla lsaxlgyalf fdelmsgads rkwfaedipk lanlllrlps llevhyqnsr
      121 aygyglrilg pqqpgmvlls qeligallac slfclfpisn rglkhlptin fdqlfaslyd
      181 sysesqenkv rciicyfqri clqmptgsvs ferkllsleh hpwqsflsyp yadfwtksti
      241 plcpfqvhss gliedhaiea levdfankyl gggalhrgcv qeeirfminp eliagmlflp
      301 smadneaiei vgaerfsdyt gyassfrfsg dyvdkrsvdf lgrrktriva idalcsprmk
      361 qyklkylire tnkafcgfld qskysqykri fkmnsvqlne gsslpikakg esrteevrks
      421 dekswrledc enyigiatgn wgcgafggdp evktiiqwla asqalrpfis yytfglealq
      481 slaqvtqwii lqkwnvgdlw nilieyssqk lrgeadvgff awllpslpk
//
LOCUS       XP_040943712             493 aa            linear   PLN 06-AUG-2024
DEFINITION  la-related protein 6B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943712
VERSION     XP_040943712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087778.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..493
                     /product="la-related protein 6B isoform X1"
                     /calculated_mol_wt=54523
     Region          145..221
                     /region_name="LARP_6"
                     /note="La RNA-binding domain of La-related protein 6;
                     cd08033"
                     /db_xref="CDD:153402"
     Site            order(151,154..155,160,163..164,166,187..189)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153402"
     Region          236..344
                     /region_name="RRM_La_like_plant"
                     /note="RNA recognition motif (RRM) found in plant proteins
                     related to the La autoantigen; cd12288"
                     /db_xref="CDD:409730"
     CDS             1..493
                     /gene="LOC107938957"
                     /coded_by="XM_041087778.1:322..1803"
                     /db_xref="GeneID:107938957"
ORIGIN      
        1 malpetldsp qsssssdpql frnlsssrln aqapefvptr stpqqqqqqq qsmrmmippp
       61 pppgimhvys pppapagaaf hlpvpmpphl vpvphhmsmr nhhhhpyqnh hhreqeveav
      121 akkdhqehkd hgsisskngl seeatlkiln qveyyfgdln lattdhlmrf inkdpdgyvp
      181 isvvasfkki kalvtthsql atvlrnsakl vvsedgkkvr rqhpltesdm eelqsriiva
      241 enlpedhchq nlmkifsavg ryrdyyisne vmsssvktir tcqpqpsggg msstsrsaks
      301 dgmhfsnklh afveyetvel aekavaelne egnwrsglrv rlmlrhvskp aharvkkghd
      361 gegqceeddv ciselpsnek qqedpsqlsd ihshgnpass npiligeehs nekecgqkkg
      421 rnrgrgkgrg rtqyhnnhhs shgnhvgtpp sassnwvsne qatgakqppg prmpdgtrgf
      481 amgrgkpvav nta
//
LOCUS       XP_040943713             479 aa            linear   PLN 06-AUG-2024
DEFINITION  la-related protein 6B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943713
VERSION     XP_040943713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087779.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..479
                     /product="la-related protein 6B isoform X2"
                     /calculated_mol_wt=52758
     Region          145..221
                     /region_name="LARP_6"
                     /note="La RNA-binding domain of La-related protein 6;
                     cd08033"
                     /db_xref="CDD:153402"
     Site            order(151,154..155,160,163..164,166,187..189)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153402"
     Region          236..330
                     /region_name="RRM_La_like_plant"
                     /note="RNA recognition motif (RRM) found in plant proteins
                     related to the La autoantigen; cd12288"
                     /db_xref="CDD:409730"
     CDS             1..479
                     /gene="LOC107938957"
                     /coded_by="XM_041087779.1:350..1789"
                     /db_xref="GeneID:107938957"
ORIGIN      
        1 malpetldsp qsssssdpql frnlsssrln aqapefvptr stpqqqqqqq qsmrmmippp
       61 pppgimhvys pppapagaaf hlpvpmpphl vpvphhmsmr nhhhhpyqnh hhreqeveav
      121 akkdhqehkd hgsisskngl seeatlkiln qveyyfgdln lattdhlmrf inkdpdgyvp
      181 isvvasfkki kalvtthsql atvlrnsakl vvsedgkkvr rqhpltesdm eelqsriiva
      241 enlpedhchq nlmkifsavg svktirtcqp qpsgggmsst srsaksdgmh fsnklhafve
      301 yetvelaeka vaelneegnw rsglrvrlml rhvskpahar vkkghdgegq ceeddvcise
      361 lpsnekqqed psqlsdihsh gnpassnpil igeehsneke cgqkkgrnrg rgkgrgrtqy
      421 hnnhhsshgn hvgtppsass nwvsneqatg akqppgprmp dgtrgfamgr gkpvavnta
//
LOCUS       XP_040943714             444 aa            linear   PLN 06-AUG-2024
DEFINITION  guanosine nucleotide diphosphate dissociation inhibitor 2
            [Gossypium hirsutum].
ACCESSION   XP_040943714
VERSION     XP_040943714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087780.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..444
                     /product="guanosine nucleotide diphosphate dissociation
                     inhibitor 2"
                     /calculated_mol_wt=49645
     Region          1..433
                     /region_name="GDI"
                     /note="GDP dissociation inhibitor; pfam00996"
                     /db_xref="CDD:395792"
     CDS             1..444
                     /gene="LOC107942992"
                     /coded_by="XM_041087780.1:223..1557"
                     /db_xref="GeneID:107942992"
ORIGIN      
        1 mdeeydvivl gtglkecils gllsvdglkv lhmdrndyyg gestslnliq lwkkfrgndk
       61 ppahlgssrd ynvdmvpkfm mangtlvrvl ihtdvtkyly fkavdgsyvf nkgkvhkvpa
      121 tdmealkspl mgifekrrar kffiyvqdyd ekdpkthegm dltrvstral iakyglddnt
      181 vdfighalal hrddryldep aldtvkrmkl yaeslarfqg gspyiyplyg lgelpqafar
      241 lsavyggtym lnkpeckvey ddegkvcgvt segetarckk vvcdpsylpn kvrkigkvar
      301 aiaimshpip ntndshsvqi ilpqkqlgrk sdmyvfccsy shnvapkgkf iafvsteaet
      361 dhpeselkpg idllgpvdei ffdiydryep vnepsldncf istsydatth festvsdvln
      421 mytmitgkvl dlsvdlsaas aaee
//
LOCUS       XP_040943715             328 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943715
VERSION     XP_040943715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087781.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..328
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=36564
     Region          54..153
                     /region_name="WHy"
                     /note="Water Stress and Hypersensitive response;
                     smart00769"
                     /db_xref="CDD:214812"
     Region          172..294
                     /region_name="LEA"
                     /note="Dessication stress tolerance protein, LEA/WHy
                     domain [Defense mechanisms]; COG5608"
                     /db_xref="CDD:444339"
     CDS             1..328
                     /gene="LOC107942991"
                     /coded_by="XM_041087781.1:341..1327"
                     /db_xref="GeneID:107942991"
ORIGIN      
        1 msssdkpelv erdvkdkvdd kednsgfidk vkgfihdige kieetigfgk ptadvaeihl
       61 pcinlekaei vvdvliknpn pvpiplvdid yliesdgrkl lsglipdagt ihahgeetvk
      121 ipvtliyddi kstyddikpg siipyrlkvd livdvpvfgr ltlplektge ipipykpdid
      181 mekihferfs weetiavlhl klenmndfdl glnaldyevw lsevsigsae leksakigkn
      241 gisyieipis frpkdfgsal wdmirgkgtg ysmkghinvd tpfgamklpi skeggttrlk
      301 knredggddd dddekkvrrm fecksklc
//
LOCUS       XP_040943716             328 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943716
VERSION     XP_040943716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087782.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..328
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=36564
     Region          54..153
                     /region_name="WHy"
                     /note="Water Stress and Hypersensitive response;
                     smart00769"
                     /db_xref="CDD:214812"
     Region          172..294
                     /region_name="LEA"
                     /note="Dessication stress tolerance protein, LEA/WHy
                     domain [Defense mechanisms]; COG5608"
                     /db_xref="CDD:444339"
     CDS             1..328
                     /gene="LOC107942991"
                     /coded_by="XM_041087782.1:354..1340"
                     /db_xref="GeneID:107942991"
ORIGIN      
        1 msssdkpelv erdvkdkvdd kednsgfidk vkgfihdige kieetigfgk ptadvaeihl
       61 pcinlekaei vvdvliknpn pvpiplvdid yliesdgrkl lsglipdagt ihahgeetvk
      121 ipvtliyddi kstyddikpg siipyrlkvd livdvpvfgr ltlplektge ipipykpdid
      181 mekihferfs weetiavlhl klenmndfdl glnaldyevw lsevsigsae leksakigkn
      241 gisyieipis frpkdfgsal wdmirgkgtg ysmkghinvd tpfgamklpi skeggttrlk
      301 knredggddd dddekkvrrm fecksklc
//
LOCUS       XP_040943717             318 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943717
VERSION     XP_040943717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087783.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..318
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=35268
     Region          54..153
                     /region_name="WHy"
                     /note="Water Stress and Hypersensitive response;
                     smart00769"
                     /db_xref="CDD:214812"
     Region          172..294
                     /region_name="LEA"
                     /note="Dessication stress tolerance protein, LEA/WHy
                     domain [Defense mechanisms]; COG5608"
                     /db_xref="CDD:444339"
     CDS             1..318
                     /gene="LOC107942991"
                     /coded_by="XM_041087783.1:341..1297"
                     /db_xref="GeneID:107942991"
ORIGIN      
        1 msssdkpelv erdvkdkvdd kednsgfidk vkgfihdige kieetigfgk ptadvaeihl
       61 pcinlekaei vvdvliknpn pvpiplvdid yliesdgrkl lsglipdagt ihahgeetvk
      121 ipvtliyddi kstyddikpg siipyrlkvd livdvpvfgr ltlplektge ipipykpdid
      181 mekihferfs weetiavlhl klenmndfdl glnaldyevw lsevsigsae leksakigkn
      241 gisyieipis frpkdfgsal wdmirgkgtg ysmkghinvd tpfgamklpi skeggttrlk
      301 knredggddd dddeivdd
//
LOCUS       XP_040943718             318 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943718
VERSION     XP_040943718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087784.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..318
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=35268
     Region          54..153
                     /region_name="WHy"
                     /note="Water Stress and Hypersensitive response;
                     smart00769"
                     /db_xref="CDD:214812"
     Region          172..294
                     /region_name="LEA"
                     /note="Dessication stress tolerance protein, LEA/WHy
                     domain [Defense mechanisms]; COG5608"
                     /db_xref="CDD:444339"
     CDS             1..318
                     /gene="LOC107942991"
                     /coded_by="XM_041087784.1:354..1310"
                     /db_xref="GeneID:107942991"
ORIGIN      
        1 msssdkpelv erdvkdkvdd kednsgfidk vkgfihdige kieetigfgk ptadvaeihl
       61 pcinlekaei vvdvliknpn pvpiplvdid yliesdgrkl lsglipdagt ihahgeetvk
      121 ipvtliyddi kstyddikpg siipyrlkvd livdvpvfgr ltlplektge ipipykpdid
      181 mekihferfs weetiavlhl klenmndfdl glnaldyevw lsevsigsae leksakigkn
      241 gisyieipis frpkdfgsal wdmirgkgtg ysmkghinvd tpfgamklpi skeggttrlk
      301 knredggddd dddeivdd
//
LOCUS       XP_040943719             315 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943719
VERSION     XP_040943719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087785.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=34941
     Region          54..153
                     /region_name="WHy"
                     /note="Water Stress and Hypersensitive response;
                     smart00769"
                     /db_xref="CDD:214812"
     Region          172..294
                     /region_name="LEA"
                     /note="Dessication stress tolerance protein, LEA/WHy
                     domain [Defense mechanisms]; COG5608"
                     /db_xref="CDD:444339"
     CDS             1..315
                     /gene="LOC107942991"
                     /coded_by="XM_041087785.1:379..1326"
                     /db_xref="GeneID:107942991"
ORIGIN      
        1 msssdkpelv erdvkdkvdd kednsgfidk vkgfihdige kieetigfgk ptadvaeihl
       61 pcinlekaei vvdvliknpn pvpiplvdid yliesdgrkl lsglipdagt ihahgeetvk
      121 ipvtliyddi kstyddikpg siipyrlkvd livdvpvfgr ltlplektge ipipykpdid
      181 mekihferfs weetiavlhl klenmndfdl glnaldyevw lsevsigsae leksakigkn
      241 gisyieipis frpkdfgsal wdmirgkgtg ysmkghinvd tpfgamklpi skeggttrlk
      301 knredggddd ddded
//
LOCUS       XP_040943720             315 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943720
VERSION     XP_040943720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087786.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..315
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=34941
     Region          54..153
                     /region_name="WHy"
                     /note="Water Stress and Hypersensitive response;
                     smart00769"
                     /db_xref="CDD:214812"
     Region          172..294
                     /region_name="LEA"
                     /note="Dessication stress tolerance protein, LEA/WHy
                     domain [Defense mechanisms]; COG5608"
                     /db_xref="CDD:444339"
     CDS             1..315
                     /gene="LOC107942991"
                     /coded_by="XM_041087786.1:354..1301"
                     /db_xref="GeneID:107942991"
ORIGIN      
        1 msssdkpelv erdvkdkvdd kednsgfidk vkgfihdige kieetigfgk ptadvaeihl
       61 pcinlekaei vvdvliknpn pvpiplvdid yliesdgrkl lsglipdagt ihahgeetvk
      121 ipvtliyddi kstyddikpg siipyrlkvd livdvpvfgr ltlplektge ipipykpdid
      181 mekihferfs weetiavlhl klenmndfdl glnaldyevw lsevsigsae leksakigkn
      241 gisyieipis frpkdfgsal wdmirgkgtg ysmkghinvd tpfgamklpi skeggttrlk
      301 knredggddd ddded
//
LOCUS       XP_040943721             232 aa            linear   PLN 06-AUG-2024
DEFINITION  valine--tRNA ligase, chloroplastic/mitochondrial 2 [Gossypium
            hirsutum].
ACCESSION   XP_040943721
VERSION     XP_040943721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087787.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="valine--tRNA ligase, chloroplastic/mitochondrial
                     2"
                     /calculated_mol_wt=26273
     Region          <2..231
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..232
                     /gene="LOC121203568"
                     /coded_by="XM_041087787.1:1846..2544"
                     /db_xref="GeneID:121203568"
ORIGIN      
        1 mlidavtesy nkyffgdvgr eiydffwgdf adwyieaska tiyhsgddsv alvaqtvlly
       61 ifenilkllh pfmpfvteel wqalpnrrea liisswpqts lprstdlvkr fenlqaltra
      121 vrnaraeysv epakritasi vgseeviqyi seekevlall skldfdnihf adsppedakq
      181 svhliasegl eaylpladmv disaevqcls krlskmqtey eglkarlnsp kv
//
LOCUS       XP_040943722             232 aa            linear   PLN 06-AUG-2024
DEFINITION  valine--tRNA ligase, chloroplastic/mitochondrial 2 [Gossypium
            hirsutum].
ACCESSION   XP_040943722
VERSION     XP_040943722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087788.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="valine--tRNA ligase, chloroplastic/mitochondrial
                     2"
                     /calculated_mol_wt=26273
     Region          <2..231
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..232
                     /gene="LOC121203568"
                     /coded_by="XM_041087788.1:1705..2403"
                     /db_xref="GeneID:121203568"
ORIGIN      
        1 mlidavtesy nkyffgdvgr eiydffwgdf adwyieaska tiyhsgddsv alvaqtvlly
       61 ifenilkllh pfmpfvteel wqalpnrrea liisswpqts lprstdlvkr fenlqaltra
      121 vrnaraeysv epakritasi vgseeviqyi seekevlall skldfdnihf adsppedakq
      181 svhliasegl eaylpladmv disaevqcls krlskmqtey eglkarlnsp kv
//
LOCUS       XP_040943723             232 aa            linear   PLN 06-AUG-2024
DEFINITION  valine--tRNA ligase, chloroplastic/mitochondrial 2 [Gossypium
            hirsutum].
ACCESSION   XP_040943723
VERSION     XP_040943723.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087789.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="valine--tRNA ligase, chloroplastic/mitochondrial
                     2"
                     /calculated_mol_wt=26273
     Region          <2..231
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..232
                     /gene="LOC121203568"
                     /coded_by="XM_041087789.1:1857..2555"
                     /db_xref="GeneID:121203568"
ORIGIN      
        1 mlidavtesy nkyffgdvgr eiydffwgdf adwyieaska tiyhsgddsv alvaqtvlly
       61 ifenilkllh pfmpfvteel wqalpnrrea liisswpqts lprstdlvkr fenlqaltra
      121 vrnaraeysv epakritasi vgseeviqyi seekevlall skldfdnihf adsppedakq
      181 svhliasegl eaylpladmv disaevqcls krlskmqtey eglkarlnsp kv
//
LOCUS       XP_040943724             232 aa            linear   PLN 06-AUG-2024
DEFINITION  valine--tRNA ligase, chloroplastic/mitochondrial 2 [Gossypium
            hirsutum].
ACCESSION   XP_040943724
VERSION     XP_040943724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087790.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..232
                     /product="valine--tRNA ligase, chloroplastic/mitochondrial
                     2"
                     /calculated_mol_wt=26273
     Region          <2..231
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..232
                     /gene="LOC121203568"
                     /coded_by="XM_041087790.1:1915..2613"
                     /db_xref="GeneID:121203568"
ORIGIN      
        1 mlidavtesy nkyffgdvgr eiydffwgdf adwyieaska tiyhsgddsv alvaqtvlly
       61 ifenilkllh pfmpfvteel wqalpnrrea liisswpqts lprstdlvkr fenlqaltra
      121 vrnaraeysv epakritasi vgseeviqyi seekevlall skldfdnihf adsppedakq
      181 svhliasegl eaylpladmv disaevqcls krlskmqtey eglkarlnsp kv
//
LOCUS       XP_040943725             246 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA 2'-phosphotransferase 1 [Gossypium hirsutum].
ACCESSION   XP_040943725
VERSION     XP_040943725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087791.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..246
                     /product="tRNA 2'-phosphotransferase 1"
                     /calculated_mol_wt=27828
     Region          42..219
                     /region_name="PTS_2-RNA"
                     /note="RNA 2'-phosphotransferase, Tpt1 / KptA family;
                     pfam01885"
                     /db_xref="CDD:460371"
     CDS             1..246
                     /gene="LOC107942990"
                     /coded_by="XM_041087791.1:373..1113"
                     /db_xref="GeneID:107942990"
ORIGIN      
        1 mssfssfahs nrfggrgqdm kydrersrcr sgsgskdkid algrlltrtl rqmatelnln
       61 mrsdgyvkve dllklnmkaf aniplrsqtv ddikeavrkd nkqrfsllee ngelqiranq
      121 ghtvtveser llkqifsade mivcvhgtdk rnlesilesg lkrmkrlhvh fssglltdge
      181 visgmgrdvt vliyldvrka lekgmklyis dnkailtegf dgvvrvkcfe kieswpdrkp
      241 ipfsnv
//
LOCUS       XP_016707440             751 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707440
VERSION     XP_016707440.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851951.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707440.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..751
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83510
     Region          583..735
                     /region_name="Mic1"
                     /note="Colon cancer-associated protein Mic1-like;
                     pfam07035"
                     /db_xref="CDD:429257"
     CDS             1..751
                     /gene="LOC107922106"
                     /coded_by="XM_016851951.2:400..2655"
                     /db_xref="GeneID:107922106"
ORIGIN      
        1 mirlkvqdnl rkmawkasss qasvgglgsg alshvfiqyp plrcnipgsr gfyyddgnkl
       61 lisptsdqif swktapfspl aapitdsite gpicsvrfsl dekiiavqrs nisiqfwhre
      121 tgetfthrck sesesilgff wtdcpscdiv ivktsgldlf aydsasksli lvetkklavs
      181 wyvythesrl illasgmqck tfhgfqlssa giirlpkfem vmakpeansk pvlasedvyi
      241 vtvygriycl qvdrvamvlh syrfyrdaii qqgslpiyss kvavsvvdnv llvhqvdakv
      301 vilydifads rapisaplpv llrgfqrsdi snsrpstkes esseasdsnd neaiiygadw
      361 tflvpdlicd iankllwknh ldleaisvss sevplvlefl qrrkleanka kqlclaimqt
      421 milerrpitm vakamdvlvt syslslktgs yfkgiktert pssvpnvsgp gqatdvftsr
      481 tdgksvqhep stgvnsvsfs rpstyssset edncifepsk issndtqfvg gkvdasaess
      541 ttdnplnasv seqqesqlts paispdemyr svfapieeem tvepsylvai ileffrcanl
      601 ervkvhpsly vltiqllars eqyaelslfi inkviepske valqllesgr qslqirklgs
      661 dmlrqlslnh dyvlllvqdg yylealryar khkvttirps lfleaaftsn dsqhlaavlr
      721 ffsdfipgfr stsdfftyyn vlnemsssvt a
//
LOCUS       XP_016707442             751 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707442
VERSION     XP_016707442.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851953.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707442.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..751
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83510
     Region          583..735
                     /region_name="Mic1"
                     /note="Colon cancer-associated protein Mic1-like;
                     pfam07035"
                     /db_xref="CDD:429257"
     CDS             1..751
                     /gene="LOC107922106"
                     /coded_by="XM_016851953.2:400..2655"
                     /db_xref="GeneID:107922106"
ORIGIN      
        1 mirlkvqdnl rkmawkasss qasvgglgsg alshvfiqyp plrcnipgsr gfyyddgnkl
       61 lisptsdqif swktapfspl aapitdsite gpicsvrfsl dekiiavqrs nisiqfwhre
      121 tgetfthrck sesesilgff wtdcpscdiv ivktsgldlf aydsasksli lvetkklavs
      181 wyvythesrl illasgmqck tfhgfqlssa giirlpkfem vmakpeansk pvlasedvyi
      241 vtvygriycl qvdrvamvlh syrfyrdaii qqgslpiyss kvavsvvdnv llvhqvdakv
      301 vilydifads rapisaplpv llrgfqrsdi snsrpstkes esseasdsnd neaiiygadw
      361 tflvpdlicd iankllwknh ldleaisvss sevplvlefl qrrkleanka kqlclaimqt
      421 milerrpitm vakamdvlvt syslslktgs yfkgiktert pssvpnvsgp gqatdvftsr
      481 tdgksvqhep stgvnsvsfs rpstyssset edncifepsk issndtqfvg gkvdasaess
      541 ttdnplnasv seqqesqlts paispdemyr svfapieeem tvepsylvai ileffrcanl
      601 ervkvhpsly vltiqllars eqyaelslfi inkviepske valqllesgr qslqirklgs
      661 dmlrqlslnh dyvlllvqdg yylealryar khkvttirps lfleaaftsn dsqhlaavlr
      721 ffsdfipgfr stsdfftyyn vlnemsssvt a
//
LOCUS       XP_016707443             751 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707443
VERSION     XP_016707443.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851954.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707443.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..751
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83510
     Region          583..735
                     /region_name="Mic1"
                     /note="Colon cancer-associated protein Mic1-like;
                     pfam07035"
                     /db_xref="CDD:429257"
     CDS             1..751
                     /gene="LOC107922106"
                     /coded_by="XM_016851954.2:273..2528"
                     /db_xref="GeneID:107922106"
ORIGIN      
        1 mirlkvqdnl rkmawkasss qasvgglgsg alshvfiqyp plrcnipgsr gfyyddgnkl
       61 lisptsdqif swktapfspl aapitdsite gpicsvrfsl dekiiavqrs nisiqfwhre
      121 tgetfthrck sesesilgff wtdcpscdiv ivktsgldlf aydsasksli lvetkklavs
      181 wyvythesrl illasgmqck tfhgfqlssa giirlpkfem vmakpeansk pvlasedvyi
      241 vtvygriycl qvdrvamvlh syrfyrdaii qqgslpiyss kvavsvvdnv llvhqvdakv
      301 vilydifads rapisaplpv llrgfqrsdi snsrpstkes esseasdsnd neaiiygadw
      361 tflvpdlicd iankllwknh ldleaisvss sevplvlefl qrrkleanka kqlclaimqt
      421 milerrpitm vakamdvlvt syslslktgs yfkgiktert pssvpnvsgp gqatdvftsr
      481 tdgksvqhep stgvnsvsfs rpstyssset edncifepsk issndtqfvg gkvdasaess
      541 ttdnplnasv seqqesqlts paispdemyr svfapieeem tvepsylvai ileffrcanl
      601 ervkvhpsly vltiqllars eqyaelslfi inkviepske valqllesgr qslqirklgs
      661 dmlrqlslnh dyvlllvqdg yylealryar khkvttirps lfleaaftsn dsqhlaavlr
      721 ffsdfipgfr stsdfftyyn vlnemsssvt a
//
LOCUS       XP_016707343            1310 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707343
VERSION     XP_016707343.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851854.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707343.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1310
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=146678
     CDS             1..1310
                     /gene="LOC107922030"
                     /coded_by="XM_016851854.2:365..4297"
                     /db_xref="GeneID:107922030"
ORIGIN      
        1 mpglaqrneq ynnasfgfws kqndvvsynq lqkfwselsm qarqkllrid kqtlferark
       61 niycsrcngl llegflqivm ygkslqqegv agnlhynrsg askkgtgggl nltngtqdei
      121 qdpsvhpwgg ltttrngslt lldcylcpks fkglqnvfds ararererel lypdacgggg
      181 rgwisqgias ygrghgtret calhtarlsc dtlvdfwsal geetrqsllr mkeedfierl
      241 myrfdskrfc rdcrrnvire fkelkelkrm rreprctswf cvadtaflye vshdtvkadw
      301 rqtfadtigt yhhfewavgt gegksdiref envgmngsvr vrgldldgls scyitlrawk
      361 ldgrcselsv kahalkgqqc vhcrlvvgdg yvtitrgeni rrffehaeev eeeedddsmd
      421 kdgneidgec frpqkhaksp elarefllda atvifkeqve kafregtarq nahsifvcla
      481 iklleerihv ackeiitlek qmklleeeek ekreeeeqre rkrtkerekk lrrkerlkgk
      541 ererekkcad ssvtpdfske vsspntkvee nisincrdsv cetsdiivst lgspddqgeq
      601 fldghlassl qnhsfdgpdg egtkvkdgng sfpteqskfs rrrlkfckdg qfdtslkwsd
      661 rrrfpvvses apvnrseary ksenfeapsr singpnkqlr insaksngrn cdvkypekfq
      721 cpnsrsdryd iyscscgqhn eyrakiepyv svtgvgqeak avsksksald mskqvyrgnk
      781 ynqqeymhed cgrlknkiia gnnpssrdsl nsnkvwepte vqrnyprtns dtditlrsst
      841 ynkgagldnd fvkssgetct seasvnfgei ghehskvnts stslatnenc dveaqdkcss
      901 lnaasedvev rpnrnstlne ishsmissss ssdncyscfs egdsntcssn ngnlessssd
      961 seeasqqsdg rdtsicvqng fsecqvkgid kkedvngsva lesealfghs pdgrdssvci
     1021 qdgfsecqvk giekkqdvng evaleyqalf ghspdcrgnk vsgnplttva isdnekstav
     1081 mssqhqgtft svhnqpiqfp vyqapstmgy yhqnpvswsa tpanglmpfp pnpyfytgpl
     1141 gydlngnsrl cmpygtlqhf atplfnpgpv pvyqpvskan glyaedqlqi pkpvtrkeda
     1201 ftevnsemfa pgrlhtteqa angegrqndv stkphtedts fslfhfggpv alstacksnp
     1261 aplkeeiage fssqfsayhv endhacnkke ttieeyslfa asngirfsff
//
LOCUS       XP_016707344            1302 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707344
VERSION     XP_016707344.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851855.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707344.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1302
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=145638
     CDS             1..1302
                     /gene="LOC107922030"
                     /coded_by="XM_016851855.2:365..4273"
                     /db_xref="GeneID:107922030"
ORIGIN      
        1 mpglaqrneq ynnasfgfws kqndvvsynq lqkfwselsm qarqkllrid kqtlferark
       61 niycsrcngl llegflqivm ygkslqqegv agnlhynrsg askkgtgggl nltngtqdei
      121 qdpsvhpwgg ltttrngslt lldcylcpks fkglqnvfds ararererel lypdacgggg
      181 rgwisqgias ygrghgtret calhtarlsc dtlvdfwsal geetrqsllr mkeedfierl
      241 myrdcrrnvi refkelkelk rmrreprcts wfcvadtafl yevshdtvka dwrqtfadti
      301 gtyhhfewav gtgegksdir efenvgmngs vrvrgldldg lsscyitlra wkldgrcsel
      361 svkahalkgq qcvhcrlvvg dgyvtitrge nirrffehae eveeeeddds mdkdgneidg
      421 ecfrpqkhak spelarefll daatvifkeq vekafregta rqnahsifvc laiklleeri
      481 hvackeiitl ekqmklleee ekekreeeeq rerkrtkere kklrrkerlk gkererekkc
      541 adssvtpdfs kevsspntkv eenisincrd svcetsdiiv stlgspddqg eqfldghlas
      601 slqnhsfdgp dgegtkvkdg ngsfpteqsk fsrrrlkfck dgqfdtslkw sdrrrfpvvs
      661 esapvnrsea ryksenfeap srsingpnkq lrinsaksng rncdvkypek fqcpnsrsdr
      721 ydiyscscgq hneyrakiep yvsvtgvgqe akavsksksa ldmskqvyrg nkynqqeymh
      781 edcgrlknki iagnnpssrd slnsnkvwep tevqrnyprt nsdtditlrs stynkgagld
      841 ndfvkssget ctseasvnfg eighehskvn tsstslatne ncdveaqdkc sslnaasedv
      901 evrpnrnstl neishsmiss ssssdncysc fsegdsntcs snngnlesss sdseeasqqs
      961 dgrdtsicvq ngfsecqvkg idkkedvngs valesealfg hspdgrdssv ciqdgfsecq
     1021 vkgiekkqdv ngevaleyqa lfghspdcrg nkvsgnpltt vaisdnekst avmssqhqgt
     1081 ftsvhnqpiq fpvyqapstm gyyhqnpvsw satpanglmp fppnpyfytg plgydlngns
     1141 rlcmpygtlq hfatplfnpg pvpvyqpvsk anglyaedql qipkpvtrke daftevnsem
     1201 fapgrlhtte qaangegrqn dvstkphted tsfslfhfgg pvalstacks npaplkeeia
     1261 gefssqfsay hvendhacnk kettieeysl faasngirfs ff
//
LOCUS       XP_016707345             272 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707345
VERSION     XP_016707345.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851856.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707345.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..272
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30465
     CDS             1..272
                     /gene="LOC107922032"
                     /coded_by="XM_016851856.2:435..1253"
                     /db_xref="GeneID:107922032"
ORIGIN      
        1 mgsllvpspl llpslsrsfl pklqsqpqhi sprislcnqy pfrlsfqssf prkslcshrs
       61 lagafntsse gtvsvinied fnekdwsfld seelnseqak rnidritsag eisessrvlv
      121 svgsegfvdh lvessntqll lvvhdsiffl agikeqydev kcwqgeliyv pekwtpfdvi
      181 flyflpalpf eldqifaala krcssgarvv ishpqgrevl eqqrkefpdi vngnlpdktt
      241 lqkvaadhsf emtefvdepg fylavlkfse an
//
LOCUS       XP_016706599             306 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706599
VERSION     XP_016706599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X1"
                     /calculated_mol_wt=34609
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Site            order(58,61,72,76,79,82,90,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438233"
     Region          100..299
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..306
                     /gene="LOC107921233"
                     /coded_by="XM_016851110.2:247..1167"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgcheilpyy sklkheqhcq frpyncpyag sdcsitgdip tliahlkddh kvdmhdgctf
      181 nhryvklnph evenatwmlt vfkcfgkqfc lhfeafqmgm apvymaflrf mgddseakkf
      241 syclevgang rkltwqgipr sirdshrkvr dsqdglvvqr nlalyfsggd rqelklrvtg
      301 riwkea
//
LOCUS       XP_040943726             306 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943726
VERSION     XP_040943726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087792.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X1"
                     /calculated_mol_wt=34609
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Site            order(58,61,72,76,79,82,90,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438233"
     Region          100..299
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..306
                     /gene="LOC107921233"
                     /coded_by="XM_041087792.1:492..1412"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgcheilpyy sklkheqhcq frpyncpyag sdcsitgdip tliahlkddh kvdmhdgctf
      181 nhryvklnph evenatwmlt vfkcfgkqfc lhfeafqmgm apvymaflrf mgddseakkf
      241 syclevgang rkltwqgipr sirdshrkvr dsqdglvvqr nlalyfsggd rqelklrvtg
      301 riwkea
//
LOCUS       XP_040943727             306 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943727
VERSION     XP_040943727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087793.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X1"
                     /calculated_mol_wt=34609
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Site            order(58,61,72,76,79,82,90,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438233"
     Region          100..299
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..306
                     /gene="LOC107921233"
                     /coded_by="XM_041087793.1:835..1755"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgcheilpyy sklkheqhcq frpyncpyag sdcsitgdip tliahlkddh kvdmhdgctf
      181 nhryvklnph evenatwmlt vfkcfgkqfc lhfeafqmgm apvymaflrf mgddseakkf
      241 syclevgang rkltwqgipr sirdshrkvr dsqdglvvqr nlalyfsggd rqelklrvtg
      301 riwkea
//
LOCUS       XP_016706598             306 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706598
VERSION     XP_016706598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..306
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X1"
                     /calculated_mol_wt=34609
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Site            order(58,61,72,76,79,82,90,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438233"
     Region          100..299
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..306
                     /gene="LOC107921233"
                     /coded_by="XM_016851109.2:221..1141"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgcheilpyy sklkheqhcq frpyncpyag sdcsitgdip tliahlkddh kvdmhdgctf
      181 nhryvklnph evenatwmlt vfkcfgkqfc lhfeafqmgm apvymaflrf mgddseakkf
      241 syclevgang rkltwqgipr sirdshrkvr dsqdglvvqr nlalyfsggd rqelklrvtg
      301 riwkea
//
LOCUS       XP_040943728             271 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943728
VERSION     XP_040943728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087794.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..271
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X2"
                     /calculated_mol_wt=30537
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Site            order(58,61,72,76,79,82,90,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438233"
     Region          100..264
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..271
                     /gene="LOC107921233"
                     /coded_by="XM_041087794.1:247..1062"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgdiptliah lkddhkvdmh dgctfnhryv klnphevena twmltvfkcf gkqfclhfea
      181 fqmgmapvym aflrfmgdds eakkfsycle vgangrkltw qgiprsirds hrkvrdsqdg
      241 lvvqrnlaly fsggdrqelk lrvtgriwke a
//
LOCUS       XP_016706601             271 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016706601
VERSION     XP_016706601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..271
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X2"
                     /calculated_mol_wt=30537
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Site            order(58,61,72,76,79,82,90,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438233"
     Region          100..264
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..271
                     /gene="LOC107921233"
                     /coded_by="XM_016851112.2:221..1036"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgdiptliah lkddhkvdmh dgctfnhryv klnphevena twmltvfkcf gkqfclhfea
      181 fqmgmapvym aflrfmgdds eakkfsycle vgangrkltw qgiprsirds hrkvrdsqdg
      241 lvvqrnlaly fsggdrqelk lrvtgriwke a
//
LOCUS       XP_040943729             207 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943729
VERSION     XP_040943729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087795.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X3"
                     /calculated_mol_wt=23107
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Region          100..>204
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..207
                     /gene="LOC107921233"
                     /coded_by="XM_041087795.1:202..825"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgcheilpyy sklkheqhcq frpyncpyag sdcsitgdip tliahlkddh kvdmhdgctf
      181 nhryvklnph evenatwmlt ilnadil
//
LOCUS       XP_040943730             207 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SINAT2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943730
VERSION     XP_040943730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087796.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..207
                     /product="E3 ubiquitin-protein ligase SINAT2 isoform X3"
                     /calculated_mol_wt=23107
     Region          56..94
                     /region_name="RING-HC_SIAHs"
                     /note="RING finger, HC subclass, found in Drosophila
                     melanogaster protein Seven-in-Absentia (sina) and its
                     homologs; cd16571"
                     /db_xref="CDD:438233"
     Region          100..>204
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..207
                     /gene="LOC107921233"
                     /coded_by="XM_041087796.1:835..1458"
                     /db_xref="GeneID:107921233"
ORIGIN      
        1 mapegsacke vesypavady aiattkpesn smttkssfgf vgkhgiqsnn gvyellecpv
       61 cknlmyppih qspnghtscl ncknrvhncc pscrydlgni rclalerfae slelpckyhs
      121 lgcheilpyy sklkheqhcq frpyncpyag sdcsitgdip tliahlkddh kvdmhdgctf
      181 nhryvklnph evenatwmlt ilnadil
//
LOCUS       XP_040943731             369 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein kinase At2g41970 [Gossypium hirsutum].
ACCESSION   XP_040943731
VERSION     XP_040943731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087797.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="probable protein kinase At2g41970"
                     /calculated_mol_wt=39756
     Region          81..357
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(81..84,87,89,101,103,134,150..153,208,212..213,215,
                     225..226)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..369
                     /gene="LOC107921838"
                     /coded_by="XM_041087797.1:290..1399"
                     /db_xref="GeneID:107921838"
ORIGIN      
        1 msccggaeee ldgpptnqyq tppragsqig gpgsgrgrge prgggaaksg dpqkvlpiei
       61 paipldelnn mtdnfgtksl igegsygrvf ygtlsdgqpa aikkldtsss pepdsdfffg
      121 qlsvvsrlkh ehfvellgyc lednnrilvy qhatkgslhd vlhgrkgvqg aepgpvltwn
      181 ervkiafgaa kgleylhekv qpsiihrdvr ssnvllfddf vakiadfnlt nqssdtaarl
      241 hstrvlgtfg yhapeyamtg qitqksdvys fgvvllellt grkpvdhtmp kgqqslvtwa
      301 tprlsedkvk qcvdpklnnd yppkaiakla avaalcvqye adfrpnmtiv vkalqpllna
      361 kpagpepps
//
LOCUS       XP_016707269            1718 aa            linear   PLN 06-AUG-2024
DEFINITION  187-kDa microtubule-associated protein AIR9 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707269
VERSION     XP_016707269.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851780.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707269.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1718
                     /product="187-kDa microtubule-associated protein AIR9
                     isoform X1"
                     /calculated_mol_wt=187831
     Region          <282..>431
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          304..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..392
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1718
                     /gene="LOC107921982"
                     /coded_by="XM_016851780.2:290..5446"
                     /db_xref="GeneID:107921982"
ORIGIN      
        1 medpeaqpge dpvikplnld hhfaespaes vtkvakpgks seaakpkvsa panstrkrsd
       61 trngselssg farstvsssl rssnsvavtr rnstgglsek ssastarqqn ntssiagkkp
      121 stllatesvr rslpelrgss lsssatkltp ranlsetrks vpvspvgrsl ststasgtsi
      181 qktlrkstvk psssassslk kissssldst assaskktis kvsspitrsp tvssglrsgs
      241 lsssldrssn lsgrkkaatp esrdshfivl pqveikagdd vrldlrghrv rnlnagglnl
      301 spnlefvylr dnllstlegv eiltrvkvld lsfndfkgpg feplanckal qqlylagnqi
      361 tslislpqlp nleflsvaqn klkslamasq prlqvlaask nristlkgfp ylpvlehlrv
      421 eenpilkmph leaasillvg ptlkkfndrd lsrdelalak rypthtalci rdgwefsrpe
      481 haadstfrfl feqwkdhfpp gyllkeasid kpfeedacrc hivfvqestl sidsdiilky
      541 kwflgertls nftaipdvng evywpkhedi nkilkvecip vlgeteypsi faisspvarg
      601 ngipkvvnle vhgelvegnv ikghakvawc ggtpgkgvas wlrkrwnssp vviagaegee
      661 yqltlddids slvfmytpvt eegakgepqy kytdfvkaaa psvnnvrivg davegnvirg
      721 vgnyfggreg pskfewlren ketgdflivt sgtpeytltk edvgrrlafv yipinfegqe
      781 gesvsivsgt vrqappkvtn vkiigdlren skitvtgavm ggtegssrvq wfktnsstln
      841 geneleamst skvakafrip lgavgcyiva kytpmtpnge sgesvyvite rvvetlppsl
      901 nflsitgdys eggiltasyg yiggqegksi ynwylheven dmgtlihevs gllqyrvtkd
      961 aigkfisfqc ipvrddgivg eprtclgqer irpgsprlla lqivgdaveg tilsveknyw
     1021 ggeegdsvfr wfqtssdgsq ceirgasgss ymptvddigf fisvscepvr ndwargpivl
     1081 seqigpivag pptcqslefl gsimegqrls fiasyigger gdclhewfrl kangikekls
     1141 sdefidltld dvgrsielvy tpirkdgikg nsrsiisdei spadpvglal vipdchqnqe
     1201 ivplktyfgg qegvgkytwh rtktkpnglv ltdissssed vmcgqtfsty tpsledvgay
     1261 lvlqwlptrv dgqsgkplva isssavipap pavssvnvkq ltsgiysgeg eysggyegss
     1321 lfswyretsd gtiilingan yktyevtdad ynsrllfgyt pvrsdsvvge lklsepteiv
     1381 fpelpmveml altgkaiegd vltavevipk setqqcvwsk ykkdvcyqwf fssetedrks
     1441 fgplpsqrsc sfkvcfedig rclkcecivt dvfgrssepv yaetapvlpg ipridkleie
     1501 grgfhtnlya vrgtyfggke gkskiqwlrs mvgspdlisi pgetgrmyea nvddvgyrlv
     1561 aiytpfrkdg iegqpvsast epiavepdvy kevkqkldlg svkfevlcdk drnpkkvpge
     1621 gclerrilei nrkrvkvvkp gsktsfptte irgtfappfh vevfrndqrr lrivvdsene
     1681 vdlmvhsryi rdvivlvirg laqrfnstsl nsllkiet
//
LOCUS       XP_040943732            1718 aa            linear   PLN 06-AUG-2024
DEFINITION  187-kDa microtubule-associated protein AIR9 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943732
VERSION     XP_040943732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087798.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1718
                     /product="187-kDa microtubule-associated protein AIR9
                     isoform X1"
                     /calculated_mol_wt=187831
     Region          <282..>431
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          304..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..392
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1718
                     /gene="LOC107921982"
                     /coded_by="XM_041087798.1:38..5194"
                     /db_xref="GeneID:107921982"
ORIGIN      
        1 medpeaqpge dpvikplnld hhfaespaes vtkvakpgks seaakpkvsa panstrkrsd
       61 trngselssg farstvsssl rssnsvavtr rnstgglsek ssastarqqn ntssiagkkp
      121 stllatesvr rslpelrgss lsssatkltp ranlsetrks vpvspvgrsl ststasgtsi
      181 qktlrkstvk psssassslk kissssldst assaskktis kvsspitrsp tvssglrsgs
      241 lsssldrssn lsgrkkaatp esrdshfivl pqveikagdd vrldlrghrv rnlnagglnl
      301 spnlefvylr dnllstlegv eiltrvkvld lsfndfkgpg feplanckal qqlylagnqi
      361 tslislpqlp nleflsvaqn klkslamasq prlqvlaask nristlkgfp ylpvlehlrv
      421 eenpilkmph leaasillvg ptlkkfndrd lsrdelalak rypthtalci rdgwefsrpe
      481 haadstfrfl feqwkdhfpp gyllkeasid kpfeedacrc hivfvqestl sidsdiilky
      541 kwflgertls nftaipdvng evywpkhedi nkilkvecip vlgeteypsi faisspvarg
      601 ngipkvvnle vhgelvegnv ikghakvawc ggtpgkgvas wlrkrwnssp vviagaegee
      661 yqltlddids slvfmytpvt eegakgepqy kytdfvkaaa psvnnvrivg davegnvirg
      721 vgnyfggreg pskfewlren ketgdflivt sgtpeytltk edvgrrlafv yipinfegqe
      781 gesvsivsgt vrqappkvtn vkiigdlren skitvtgavm ggtegssrvq wfktnsstln
      841 geneleamst skvakafrip lgavgcyiva kytpmtpnge sgesvyvite rvvetlppsl
      901 nflsitgdys eggiltasyg yiggqegksi ynwylheven dmgtlihevs gllqyrvtkd
      961 aigkfisfqc ipvrddgivg eprtclgqer irpgsprlla lqivgdaveg tilsveknyw
     1021 ggeegdsvfr wfqtssdgsq ceirgasgss ymptvddigf fisvscepvr ndwargpivl
     1081 seqigpivag pptcqslefl gsimegqrls fiasyigger gdclhewfrl kangikekls
     1141 sdefidltld dvgrsielvy tpirkdgikg nsrsiisdei spadpvglal vipdchqnqe
     1201 ivplktyfgg qegvgkytwh rtktkpnglv ltdissssed vmcgqtfsty tpsledvgay
     1261 lvlqwlptrv dgqsgkplva isssavipap pavssvnvkq ltsgiysgeg eysggyegss
     1321 lfswyretsd gtiilingan yktyevtdad ynsrllfgyt pvrsdsvvge lklsepteiv
     1381 fpelpmveml altgkaiegd vltavevipk setqqcvwsk ykkdvcyqwf fssetedrks
     1441 fgplpsqrsc sfkvcfedig rclkcecivt dvfgrssepv yaetapvlpg ipridkleie
     1501 grgfhtnlya vrgtyfggke gkskiqwlrs mvgspdlisi pgetgrmyea nvddvgyrlv
     1561 aiytpfrkdg iegqpvsast epiavepdvy kevkqkldlg svkfevlcdk drnpkkvpge
     1621 gclerrilei nrkrvkvvkp gsktsfptte irgtfappfh vevfrndqrr lrivvdsene
     1681 vdlmvhsryi rdvivlvirg laqrfnstsl nsllkiet
//
LOCUS       XP_016707270            1717 aa            linear   PLN 06-AUG-2024
DEFINITION  187-kDa microtubule-associated protein AIR9 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707270
VERSION     XP_016707270.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851781.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707270.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1717
                     /product="187-kDa microtubule-associated protein AIR9
                     isoform X2"
                     /calculated_mol_wt=187744
     Region          <282..>431
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          304..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..392
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1244..>1289
                     /region_name="PLN03144"
                     /note="Carbon catabolite repressor protein 4 homolog;
                     Provisional"
                     /db_xref="CDD:178689"
     CDS             1..1717
                     /gene="LOC107921982"
                     /coded_by="XM_016851781.2:290..5443"
                     /db_xref="GeneID:107921982"
ORIGIN      
        1 medpeaqpge dpvikplnld hhfaespaes vtkvakpgks seaakpkvsa panstrkrsd
       61 trngselssg farstvsssl rssnsvavtr rnstgglsek ssastarqqn ntssiagkkp
      121 stllatesvr rslpelrgss lsssatkltp ranlsetrks vpvspvgrsl ststasgtsi
      181 qktlrkstvk psssassslk kissssldst assaskktis kvsspitrsp tvssglrsgs
      241 lsssldrssn lsgrkkaatp esrdshfivl pqveikagdd vrldlrghrv rnlnagglnl
      301 spnlefvylr dnllstlegv eiltrvkvld lsfndfkgpg feplanckal qqlylagnqi
      361 tslislpqlp nleflsvaqn klkslamasq prlqvlaask nristlkgfp ylpvlehlrv
      421 eenpilkmph leaasillvg ptlkkfndrd lsrdelalak rypthtalci rdgwefsrpe
      481 haadstfrfl feqwkdhfpp gyllkeasid kpfeedacrc hivfvqestl sidsdiilky
      541 kwflgertls nftaipdvng evywpkhedi nkilkvecip vlgeteypsi faisspvarg
      601 ngipkvvnle vhgelvegnv ikghakvawc ggtpgkgvas wlrkrwnssp vviagaegee
      661 yqltlddids slvfmytpvt eegakgepqy kytdfvkaaa psvnnvrivg davegnvirg
      721 vgnyfggreg pskfewlren ketgdflivt sgtpeytltk edvgrrlafv yipinfegqe
      781 gesvsivsgt vrqappkvtn vkiigdlren skitvtgavm ggtegssrvq wfktnsstln
      841 geneleamst skvakafrip lgavgcyiva kytpmtpnge sgesvyvite rvvetlppsl
      901 nflsitgdys eggiltasyg yiggqegksi ynwylheven dmgtlihevs gllqyrvtkd
      961 aigkfisfqc ipvrddgivg eprtclgqer irpgsprlla lqivgdaveg tilsveknyw
     1021 ggeegdsvfr wfqtssdgsq ceirgasgss ymptvddigf fisvscepvr ndwargpivl
     1081 seqigpivag pptcqslefl gsimegqrls fiasyigger gdclhewfrl kangikekls
     1141 sdefidltld dvgrsielvy tpirkdgikg nsrsiisdei spadpvglal vipdchqnqe
     1201 ivplktyfgg qegvgkytwh rtktkpnglv ltdissssed vmcgqtftyt psledvgayl
     1261 vlqwlptrvd gqsgkplvai sssavipapp avssvnvkql tsgiysgege ysggyegssl
     1321 fswyretsdg tiilingany ktyevtdady nsrllfgytp vrsdsvvgel klsepteivf
     1381 pelpmvemla ltgkaiegdv ltavevipks etqqcvwsky kkdvcyqwff ssetedrksf
     1441 gplpsqrscs fkvcfedigr clkcecivtd vfgrssepvy aetapvlpgi pridkleieg
     1501 rgfhtnlyav rgtyfggkeg kskiqwlrsm vgspdlisip getgrmyean vddvgyrlva
     1561 iytpfrkdgi egqpvsaste piavepdvyk evkqkldlgs vkfevlcdkd rnpkkvpgeg
     1621 clerrilein rkrvkvvkpg sktsfpttei rgtfappfhv evfrndqrrl rivvdsenev
     1681 dlmvhsryir dvivlvirgl aqrfnstsln sllkiet
//
LOCUS       XP_016707271            1440 aa            linear   PLN 06-AUG-2024
DEFINITION  187-kDa microtubule-associated protein AIR9 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016707271
VERSION     XP_016707271.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851782.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707271.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1440
                     /product="187-kDa microtubule-associated protein AIR9
                     isoform X3"
                     /calculated_mol_wt=156508
     Region          <282..>431
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          304..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..392
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1440
                     /gene="LOC107921982"
                     /coded_by="XM_016851782.2:290..4612"
                     /db_xref="GeneID:107921982"
ORIGIN      
        1 medpeaqpge dpvikplnld hhfaespaes vtkvakpgks seaakpkvsa panstrkrsd
       61 trngselssg farstvsssl rssnsvavtr rnstgglsek ssastarqqn ntssiagkkp
      121 stllatesvr rslpelrgss lsssatkltp ranlsetrks vpvspvgrsl ststasgtsi
      181 qktlrkstvk psssassslk kissssldst assaskktis kvsspitrsp tvssglrsgs
      241 lsssldrssn lsgrkkaatp esrdshfivl pqveikagdd vrldlrghrv rnlnagglnl
      301 spnlefvylr dnllstlegv eiltrvkvld lsfndfkgpg feplanckal qqlylagnqi
      361 tslislpqlp nleflsvaqn klkslamasq prlqvlaask nristlkgfp ylpvlehlrv
      421 eenpilkmph leaasillvg ptlkkfndrd lsrdelalak rypthtalci rdgwefsrpe
      481 haadstfrfl feqwkdhfpp gyllkeasid kpfeedacrc hivfvqestl sidsdiilky
      541 kwflgertls nftaipdvng evywpkhedi nkilkvecip vlgeteypsi faisspvarg
      601 ngipkvvnle vhgelvegnv ikghakvawc ggtpgkgvas wlrkrwnssp vviagaegee
      661 yqltlddids slvfmytpvt eegakgepqy kytdfvkaaa psvnnvrivg davegnvirg
      721 vgnyfggreg pskfewlren ketgdflivt sgtpeytltk edvgrrlafv yipinfegqe
      781 gesvsivsgt vrqappkvtn vkiigdlren skitvtgavm ggtegssrvq wfktnsstln
      841 geneleamst skvakafrip lgavgcyiva kytpmtpnge sgesvyvite rvvetlppsl
      901 nflsitgdys eggiltasyg yiggqegksi ynwylheven dmgtlihevs gllqyrvtkd
      961 aigkfisfqc ipvrddgivg eprtclgqer irpgsprlla lqivgdaveg tilsveknyw
     1021 ggeegdsvfr wfqtssdgsq ceirgasgss ymptvddigf fisvscepvr ndwargpivl
     1081 seqigpivag pptcqslefl gsimegqrls fiasyigger gdclhewfrl kangikekls
     1141 sdefidltld dvgrsielvy tpirkdgikg nsrsiisdei spadpvglal vipdchqnqe
     1201 ivplktyfgg qegvgkytwh rtktkpnglv ltdissssed vmcgqtfsty tpsledvgay
     1261 lvlqwlptrv dgqsgkplva isssavipap pavssvnvkq ltsgiysgeg eysggyegss
     1321 lfswyretsd gtiilingan yktyevtdad ynsrllfgyt pvrsdsvvge lklsepteiv
     1381 fpasimqvmi qacllsytsy qqpmdvstvl vyergvlles ikflsnlpsl llaleypnry
//
LOCUS       XP_040943733             592 aa            linear   PLN 06-AUG-2024
DEFINITION  cationic amino acid transporter 1 [Gossypium hirsutum].
ACCESSION   XP_040943733
VERSION     XP_040943733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087799.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..592
                     /product="cationic amino acid transporter 1"
                     /calculated_mol_wt=64440
     Region          65..565
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..592
                     /gene="LOC107921983"
                     /coded_by="XM_041087799.1:203..1981"
                     /db_xref="GeneID:107921983"
ORIGIN      
        1 meggenengg kkrgcgcskq dflpeesfqs crsylnalcn tksrlrdrll arsadhmelh
       61 eirgrsqhem kkrlnwwdii wfgigavmgs gifvltgeaa rnhsgpavvv sylisgmtal
      121 lsvlcytefc velpvaggsf tylrvelgdf vayigagnil feyvvagasv arswtsylat
      181 lfnhdpnsfr fhassfpedy shldpiaavv sllicitacm stkgssrfns iativhllvl
      241 lfilivgltk gnpqhfsnfa pngirgilka ssilffayvg fdgvatlgee vknpgrdipi
      301 gligsmliii llycllsatl iliqpyyqid vnapftlafq aiglkwakyi valgalkgmt
      361 tvllanilgq aryfthigrt hmappflatv nektrtpvna tvvmtlvnsi vgfftsldvl
      421 anllslttll ifslvalall vrryyvgget tssnrnklil flmliigssi atavywaigk
      481 ngwigyavtv piwfiatlgl nlmvkeakkp klwgvplvpw lpsasfatnv fimasvdgas
      541 yvrfgiwtll lllyyvfial hasydaaket tdttsaatat cledggasql hh
//
LOCUS       XP_040943734             592 aa            linear   PLN 06-AUG-2024
DEFINITION  cationic amino acid transporter 1 [Gossypium hirsutum].
ACCESSION   XP_040943734
VERSION     XP_040943734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087800.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..592
                     /product="cationic amino acid transporter 1"
                     /calculated_mol_wt=64440
     Region          65..565
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..592
                     /gene="LOC107921983"
                     /coded_by="XM_041087800.1:195..1973"
                     /db_xref="GeneID:107921983"
ORIGIN      
        1 meggenengg kkrgcgcskq dflpeesfqs crsylnalcn tksrlrdrll arsadhmelh
       61 eirgrsqhem kkrlnwwdii wfgigavmgs gifvltgeaa rnhsgpavvv sylisgmtal
      121 lsvlcytefc velpvaggsf tylrvelgdf vayigagnil feyvvagasv arswtsylat
      181 lfnhdpnsfr fhassfpedy shldpiaavv sllicitacm stkgssrfns iativhllvl
      241 lfilivgltk gnpqhfsnfa pngirgilka ssilffayvg fdgvatlgee vknpgrdipi
      301 gligsmliii llycllsatl iliqpyyqid vnapftlafq aiglkwakyi valgalkgmt
      361 tvllanilgq aryfthigrt hmappflatv nektrtpvna tvvmtlvnsi vgfftsldvl
      421 anllslttll ifslvalall vrryyvgget tssnrnklil flmliigssi atavywaigk
      481 ngwigyavtv piwfiatlgl nlmvkeakkp klwgvplvpw lpsasfatnv fimasvdgas
      541 yvrfgiwtll lllyyvfial hasydaaket tdttsaatat cledggasql hh
//
LOCUS       XP_040943735             592 aa            linear   PLN 06-AUG-2024
DEFINITION  cationic amino acid transporter 1 [Gossypium hirsutum].
ACCESSION   XP_040943735
VERSION     XP_040943735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087801.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..592
                     /product="cationic amino acid transporter 1"
                     /calculated_mol_wt=64440
     Region          65..565
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..592
                     /gene="LOC107921983"
                     /coded_by="XM_041087801.1:234..2012"
                     /db_xref="GeneID:107921983"
ORIGIN      
        1 meggenengg kkrgcgcskq dflpeesfqs crsylnalcn tksrlrdrll arsadhmelh
       61 eirgrsqhem kkrlnwwdii wfgigavmgs gifvltgeaa rnhsgpavvv sylisgmtal
      121 lsvlcytefc velpvaggsf tylrvelgdf vayigagnil feyvvagasv arswtsylat
      181 lfnhdpnsfr fhassfpedy shldpiaavv sllicitacm stkgssrfns iativhllvl
      241 lfilivgltk gnpqhfsnfa pngirgilka ssilffayvg fdgvatlgee vknpgrdipi
      301 gligsmliii llycllsatl iliqpyyqid vnapftlafq aiglkwakyi valgalkgmt
      361 tvllanilgq aryfthigrt hmappflatv nektrtpvna tvvmtlvnsi vgfftsldvl
      421 anllslttll ifslvalall vrryyvgget tssnrnklil flmliigssi atavywaigk
      481 ngwigyavtv piwfiatlgl nlmvkeakkp klwgvplvpw lpsasfatnv fimasvdgas
      541 yvrfgiwtll lllyyvfial hasydaaket tdttsaatat cledggasql hh
//
LOCUS       XP_016706660             108 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706660
VERSION     XP_016706660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851171.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=11935
     Region          28..104
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..108
                     /gene="LOC107921296"
                     /coded_by="XM_016851171.2:275..601"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiieavrvi
       61 ahhvsgksrg ygfvrftsda sakvafkemh skvldgrnir vefackns
//
LOCUS       XP_016706661             108 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706661
VERSION     XP_016706661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851172.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=11935
     Region          28..104
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..108
                     /gene="LOC107921296"
                     /coded_by="XM_016851172.2:249..575"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiieavrvi
       61 ahhvsgksrg ygfvrftsda sakvafkemh skvldgrnir vefackns
//
LOCUS       XP_016706662             108 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016706662
VERSION     XP_016706662.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851173.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..108
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=11935
     Region          28..104
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..108
                     /gene="LOC107921296"
                     /coded_by="XM_016851173.2:277..603"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiieavrvi
       61 ahhvsgksrg ygfvrftsda sakvafkemh skvldgrnir vefackns
//
LOCUS       XP_016706663             107 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016706663
VERSION     XP_016706663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851174.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..107
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=11864
     Region          28..103
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..107
                     /gene="LOC107921296"
                     /coded_by="XM_016851174.2:274..597"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiievrvia
       61 hhvsgksrgy gfvrftsdas akvafkemhs kvldgrnirv efackns
//
LOCUS       XP_040943736             107 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943736
VERSION     XP_040943736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087802.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..107
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=11864
     Region          28..103
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..107
                     /gene="LOC107921296"
                     /coded_by="XM_041087802.1:224..547"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiievrvia
       61 hhvsgksrgy gfvrftsdas akvafkemhs kvldgrnirv efackns
//
LOCUS       XP_040943737             107 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943737
VERSION     XP_040943737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087803.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..107
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=11864
     Region          28..103
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..107
                     /gene="LOC107921296"
                     /coded_by="XM_041087803.1:275..598"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiievrvia
       61 hhvsgksrgy gfvrftsdas akvafkemhs kvldgrnirv efackns
//
LOCUS       XP_040943738             107 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 4, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943738
VERSION     XP_040943738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087804.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..107
                     /product="glycine-rich RNA-binding protein 4,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=11864
     Region          28..103
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..107
                     /gene="LOC107921296"
                     /coded_by="XM_041087804.1:225..548"
                     /db_xref="GeneID:107921296"
ORIGIN      
        1 mqaingmirv lhknslarsl warnscsklf vgglsydtne tvlknafeky geiievrvia
       61 hhvsgksrgy gfvrftsdas akvafkemhs kvldgrnirv efackns
//
LOCUS       XP_016708243              97 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L17 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708243
VERSION     XP_016708243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..97
                     /product="50S ribosomal protein L17 isoform X1"
                     /calculated_mol_wt=11062
     Region          3..97
                     /region_name="Ribosomal_L17"
                     /note="Ribosomal protein L17; pfam01196"
                     /db_xref="CDD:460106"
     CDS             1..97
                     /gene="LOC107922633"
                     /coded_by="XM_016852754.2:402..695"
                     /db_xref="GeneID:107922633"
ORIGIN      
        1 msmlrtmvsq lvkheriett vakakeirrl gdnmvqlgke gshfaarhaa afvreddvih
       61 klftelayry kdrasgytrl lrtrirvgdv apmayie
//
LOCUS       XP_016708242              97 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L17 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016708242
VERSION     XP_016708242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..97
                     /product="50S ribosomal protein L17 isoform X1"
                     /calculated_mol_wt=11062
     Region          3..97
                     /region_name="Ribosomal_L17"
                     /note="Ribosomal protein L17; pfam01196"
                     /db_xref="CDD:460106"
     CDS             1..97
                     /gene="LOC107922633"
                     /coded_by="XM_016852753.2:430..723"
                     /db_xref="GeneID:107922633"
ORIGIN      
        1 msmlrtmvsq lvkheriett vakakeirrl gdnmvqlgke gshfaarhaa afvreddvih
       61 klftelayry kdrasgytrl lrtrirvgdv apmayie
//
LOCUS       XP_016708244              90 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L17 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016708244
VERSION     XP_016708244.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852755.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..90
                     /product="50S ribosomal protein L17 isoform X2"
                     /calculated_mol_wt=10336
     Region          3..>40
                     /region_name="Ribosomal_L17"
                     /note="Ribosomal protein L17; cl00356"
                     /db_xref="CDD:469740"
     CDS             1..90
                     /gene="LOC107922633"
                     /coded_by="XM_016852755.2:645..917"
                     /db_xref="GeneID:107922633"
ORIGIN      
        1 msmlrtmvsq lvkheriett vakakeirrl gdnmvqlgke qgmllllsek mmlftsylqn
       61 whidtktgqv diqdcfelas elvmlpqwpi
//
LOCUS       XP_016706680             355 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 24 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016706680
VERSION     XP_016706680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..355
                     /product="GATA transcription factor 24 isoform X1"
                     /calculated_mol_wt=38311
     Region          103..133
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          167..210
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     Region          237..>281
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(238,241,262,265)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(249..250,252,262..272)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..355
                     /gene="LOC107921312"
                     /coded_by="XM_016851191.2:373..1440"
                     /db_xref="GeneID:107921312"
ORIGIN      
        1 mkhliivtsg lpfsvqlepa afrclymaaa npqplqirpf eehargtmqi ddddgdyadd
       61 amddvedani dsvnvaehgm gliggviggg gaagggavra lrtseltlsf egevyvfpav
      121 tsekvqavll llggrdiptg vstievpfdq nnmgvadvsk rsnlsrrias lvrfrekrke
      181 rcfekkiryt vrkevaqrmh rkngqfasvk estspsgwds sqigfqdgtr petairscqh
      241 cgvsenntpa mrrgpagprt fcnacglmwa nkgtlrdlsk ggrnisleqs epetpievkp
      301 sivegdlsan rdengnpskd ltngsnnasv spdeedlhes aedltnsvyg dcsfc
//
LOCUS       XP_040943739             371 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 24 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943739
VERSION     XP_040943739.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087805.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..371
                     /product="GATA transcription factor 24 isoform X2"
                     /calculated_mol_wt=40002
     Region          103..133
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          167..226
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     Region          253..>297
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(254,257,278,281)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(265..266,268,278..288)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..371
                     /gene="LOC107921312"
                     /coded_by="XM_041087805.1:340..1455"
                     /db_xref="GeneID:107921312"
ORIGIN      
        1 mkhliivtsg lpfsvqlepa afrclymaaa npqplqirpf eehargtmqi ddddgdyadd
       61 amddvedani dsvnvaehgm gliggviggg gaagggavra lrtseltlsf egevyvfpav
      121 tsekvqavll llggrdiptg vstievpfdq nnmgvadvsk rsnlsrrias lvrfrekrke
      181 rcfekkiryt vrkevaqsga adnddvifsf ytsrmhrkng qfasvkests psgwdssqig
      241 fqdgtrpeta irscqhcgvs enntpamrrg pagprtfcna cglmwankgt lrdlskggrn
      301 isleqsepet pievkpsive gdlsanrden gnpskdltng snnasvspde edlhesaedl
      361 tnsvygdcsf c
//
LOCUS       XP_016706679             356 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 24 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016706679
VERSION     XP_016706679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..356
                     /product="GATA transcription factor 24 isoform X3"
                     /calculated_mol_wt=38398
     Region          103..133
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          167..211
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     Region          238..>282
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(239,242,263,266)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(250..251,253,263..273)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..356
                     /gene="LOC107921312"
                     /coded_by="XM_016851190.2:338..1408"
                     /db_xref="GeneID:107921312"
ORIGIN      
        1 mkhliivtsg lpfsvqlepa afrclymaaa npqplqirpf eehargtmqi ddddgdyadd
       61 amddvedani dsvnvaehgm gliggviggg gaagggavra lrtseltlsf egevyvfpav
      121 tsekvqavll llggrdiptg vstievpfdq nnmgvadvsk rsnlsrrias lvrfrekrke
      181 rcfekkiryt vrkevaqsrm hrkngqfasv kestspsgwd ssqigfqdgt rpetairscq
      241 hcgvsenntp amrrgpagpr tfcnacglmw ankgtlrdls kggrnisleq sepetpievk
      301 psivegdlsa nrdengnpsk dltngsnnas vspdeedlhe saedltnsvy gdcsfc
//
LOCUS       XP_016706388             644 aa            linear   PLN 06-AUG-2024
DEFINITION  probable rhamnogalacturonate lyase B isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016706388
VERSION     XP_016706388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..644
                     /product="probable rhamnogalacturonate lyase B isoform X1"
                     /calculated_mol_wt=73454
     Region          5..203
                     /region_name="RGL4_N"
                     /note="N-terminal catalytic domain of rhamnogalacturonan
                     lyase, a family 4 polysaccharide lyase; cl15675"
                     /db_xref="CDD:472824"
     Site            order(72,142,144,146,148,150,185,191,206..207,258,260,265)
                     /site_type="active"
                     /db_xref="CDD:199907"
     Site            order(206,265)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:199907"
     Region          335..434
                     /region_name="RGL4_M"
                     /note="Middle domain of rhamnogalacturonan lyase, a family
                     4 polysaccharide lyase; cd10316"
                     /db_xref="CDD:199904"
     Region          444..632
                     /region_name="CBM-like"
                     /note="Polysaccharide lyase family 4, domain III;
                     pfam14683"
                     /db_xref="CDD:464260"
     Site            order(452,628)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:199905"
     Site            order(580,581,585)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:199905"
     CDS             1..644
                     /gene="LOC107921046"
                     /coded_by="XM_016850899.2:151..2085"
                     /db_xref="GeneID:107921046"
ORIGIN      
        1 mpsqgvklyv qdkhvvldng ilqvtisnpd givtaiqyng idnllavenq eadrgywdlv
       61 wnlagskgtk gkfdrieats fevivenedq velsfsrkwd pslegkivpl niekrfimlr
      121 nssgfytyai yehlkewpaf nldrfrvafk lrkdkfhyma madnrqrymp lpddrlpyrs
      181 qtlacpeavl lvdpmetefr gevddkyqys cenkdnrvhg wicndppvgf wqitpsdefr
      241 sagphkqnlt shvgpttlav mhsvhysged lilkfgsnea wkkvfgpifi ylnslsdagg
      301 nplslwedak qqmrievqdw pytfpasqdf pqshqrgnvs grllvkdryv ckddipanga
      361 yvglappgdv gswqsevkgy qfwtradedg yfcinniwtg dynlyawvpg figdykydvi
      421 itpsagydiy mgdlvyeppr dgptlweigv pdrtaaefyv pdpspmfvnr lyvnhpdrfr
      481 qyglweryad lypdrdlvyt vgvsdytkdw ffaqvtrknd ddtyqgttwq ikfkldctan
      541 etetyklrla latahaaelq vrvnddgksp lfssgqigkd ntiathgihg lyrlyhvgip
      601 gnlllegdnt ifltqpksts pfqgimydyi rlegpassng nkka
//
LOCUS       XP_016706389             644 aa            linear   PLN 06-AUG-2024
DEFINITION  probable rhamnogalacturonate lyase B isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016706389
VERSION     XP_016706389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850900.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..644
                     /product="probable rhamnogalacturonate lyase B isoform X2"
                     /calculated_mol_wt=73426
     Region          5..203
                     /region_name="RGL4_N"
                     /note="N-terminal catalytic domain of rhamnogalacturonan
                     lyase, a family 4 polysaccharide lyase; cl15675"
                     /db_xref="CDD:472824"
     Site            order(72,142,144,146,148,150,185,191,206..207,258,260,265)
                     /site_type="active"
                     /db_xref="CDD:199907"
     Site            order(206,265)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:199907"
     Region          335..434
                     /region_name="RGL4_M"
                     /note="Middle domain of rhamnogalacturonan lyase, a family
                     4 polysaccharide lyase; cd10316"
                     /db_xref="CDD:199904"
     Region          444..632
                     /region_name="CBM-like"
                     /note="Polysaccharide lyase family 4, domain III;
                     pfam14683"
                     /db_xref="CDD:464260"
     Site            order(452,628)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:199905"
     Site            order(580,581,585)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:199905"
     CDS             1..644
                     /gene="LOC107921046"
                     /coded_by="XM_016850900.2:294..2228"
                     /db_xref="GeneID:107921046"
ORIGIN      
        1 mpsqgvklyv qdkhvvldng ilqvtisnpd givtaiqyng idnllavenq eadrgywdlv
       61 wnlagskgtk gkfdkieats fevivenedq velsfsrkwd pslegkivpl niekrfimlr
      121 nssgfytyai yehlkewpaf nldrfrvafk lrkdkfhyma madnrqrymp lpddrlpyrs
      181 qtlacpeavl lvdpmetefr gevddkyqys cenkdnrvhg wicndppvgf wqitpsdefr
      241 sagphkqnlt shvgpttlav mhsvhysged lilkfgsnea wkkvfgpifi ylnslsdagg
      301 nplslwedak qqmrievqdw pytfpasqdf pqshqrgnvs grllvkdryv ckddipanga
      361 yvglappgdv gswqsevkgy qfwtradedg yfcinniwtg dynlyawvpg figdykydvi
      421 itpsagydiy mgdlvyeppr dgptlweigv pdrtaaefyv pdpspmfvnr lyvnhpdrfr
      481 qyglweryad lypdrdlvyt vgvsdytkdw ffaqvtrknd ddtyqgttwq ikfkldctan
      541 etetyklrla latahaaelq vrvnddgksp lfssgqigkd ntiathgihg lyrlyhvgip
      601 gnlllegdnt ifltqpksts pfqgimydyi rlegpassng nkka
//
LOCUS       XP_016706391             624 aa            linear   PLN 06-AUG-2024
DEFINITION  probable rhamnogalacturonate lyase B isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016706391
VERSION     XP_016706391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016850902.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..624
                     /product="probable rhamnogalacturonate lyase B isoform X3"
                     /calculated_mol_wt=71130
     Region          5..183
                     /region_name="RGL4_N"
                     /note="N-terminal catalytic domain of rhamnogalacturonan
                     lyase, a family 4 polysaccharide lyase; cl15675"
                     /db_xref="CDD:472824"
     Site            order(52,122,124,126,128,130,165,171,186..187,238,240,245)
                     /site_type="active"
                     /db_xref="CDD:199907"
     Site            order(186,245)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:199907"
     Region          315..414
                     /region_name="RGL4_M"
                     /note="Middle domain of rhamnogalacturonan lyase, a family
                     4 polysaccharide lyase; cd10316"
                     /db_xref="CDD:199904"
     Region          424..612
                     /region_name="CBM-like"
                     /note="Polysaccharide lyase family 4, domain III;
                     pfam14683"
                     /db_xref="CDD:464260"
     Site            order(432,608)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:199905"
     Site            order(560,561,565)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:199905"
     CDS             1..624
                     /gene="LOC107921046"
                     /coded_by="XM_016850902.2:296..2170"
                     /db_xref="GeneID:107921046"
ORIGIN      
        1 mpsqgvklyv qdkhvvldng ilqvtisnpd givtaiqyng idnllavenq eadrgieats
       61 fevivenedq velsfsrkwd pslegkivpl niekrfimlr nssgfytyai yehlkewpaf
      121 nldrfrvafk lrkdkfhyma madnrqrymp lpddrlpyrs qtlacpeavl lvdpmetefr
      181 gevddkyqys cenkdnrvhg wicndppvgf wqitpsdefr sagphkqnlt shvgpttlav
      241 mhsvhysged lilkfgsnea wkkvfgpifi ylnslsdagg nplslwedak qqmrievqdw
      301 pytfpasqdf pqshqrgnvs grllvkdryv ckddipanga yvglappgdv gswqsevkgy
      361 qfwtradedg yfcinniwtg dynlyawvpg figdykydvi itpsagydiy mgdlvyeppr
      421 dgptlweigv pdrtaaefyv pdpspmfvnr lyvnhpdrfr qyglweryad lypdrdlvyt
      481 vgvsdytkdw ffaqvtrknd ddtyqgttwq ikfkldctan etetyklrla latahaaelq
      541 vrvnddgksp lfssgqigkd ntiathgihg lyrlyhvgip gnlllegdnt ifltqpksts
      601 pfqgimydyi rlegpassng nkka
//
LOCUS       XP_040943740             527 aa            linear   PLN 06-AUG-2024
DEFINITION  probable rhamnogalacturonate lyase B isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943740
VERSION     XP_040943740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087806.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..527
                     /product="probable rhamnogalacturonate lyase B isoform X4"
                     /calculated_mol_wt=60295
     Region          <1..188
                     /region_name="RGL4_N"
                     /note="N-terminal catalytic domain of rhamnogalacturonan
                     lyase, a family 4 polysaccharide lyase; cd10320"
                     /db_xref="CDD:199907"
     Site            order(25,27,29,31,33,68,74,89..90,141,143,148)
                     /site_type="active"
                     /db_xref="CDD:199907"
     Site            order(89,148)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:199907"
     Region          218..317
                     /region_name="RGL4_M"
                     /note="Middle domain of rhamnogalacturonan lyase, a family
                     4 polysaccharide lyase; cd10316"
                     /db_xref="CDD:199904"
     Region          327..515
                     /region_name="CBM-like"
                     /note="Polysaccharide lyase family 4, domain III;
                     pfam14683"
                     /db_xref="CDD:464260"
     Site            order(335,511)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:199905"
     Site            order(463,464,468)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:199905"
     CDS             1..527
                     /gene="LOC107921046"
                     /coded_by="XM_041087806.1:311..1894"
                     /db_xref="GeneID:107921046"
ORIGIN      
        1 mlrnssgfyt yaiyehlkew pafnldrfrv afklrkdkfh ymamadnrqr ymplpddrlp
       61 yrsqtlacpe avllvdpmet efrgevddky qyscenkdnr vhgwicndpp vgfwqitpsd
      121 efrsagphkq nltshvgptt lavmhsvhys gedlilkfgs neawkkvfgp ifiylnslsd
      181 aggnplslwe dakqqmriev qdwpytfpas qdfpqshqrg nvsgrllvkd ryvckddipa
      241 ngayvglapp gdvgswqsev kgyqfwtrad edgyfcinni wtgdynlyaw vpgfigdyky
      301 dviitpsagy diymgdlvye pprdgptlwe igvpdrtaae fyvpdpspmf vnrlyvnhpd
      361 rfrqyglwer yadlypdrdl vytvgvsdyt kdwffaqvtr kndddtyqgt twqikfkldc
      421 tanetetykl rlalatahaa elqvrvnddg ksplfssgqi gkdntiathg ihglyrlyhv
      481 gipgnllleg dntifltqpk stspfqgimy dyirlegpas sngnkka
//
LOCUS       XP_016707589             799 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707589
VERSION     XP_016707589.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707589.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..799
                     /product="CSC1-like protein RXW8 isoform X1"
                     /calculated_mol_wt=90825
     Region          5..720
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          417..684
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..799
                     /gene="LOC107922206"
                     /coded_by="XM_016852100.2:479..2878"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mdigalltsa giniaicvvl lslysilrkq psnvsvyfmr rlisepikhs dpfrferlvp
       61 saswivrawq atneeilaag gvdalvflri vvfsirvfii aamicvflll pvnyygqemq
      121 hkqihsesle vftignvkeg skwfwthcla lyviscsacv llhfeyknit kmrlahitgs
      181 pvnpshftvl vrsipcsqnh sysksvedff styypasyvs hqmvyragrv dklmkdaekm
      241 yrmlktiest tkksympccl cgksthsfea lnndaesvei ktssdelqps qrekklkise
      301 qkdvekiyrk lktietqnkm sstpgclcgg imhyfkmlkk eaesveckts sdrsqpsqtd
      361 kerpaafvff rtryaaivaa qvlqssnpml wvtqlapepn dvywsnlsip ykqvwlrkia
      421 tllgafvfmf vflapvtfvq gltqldqlrq tfpflkgilk qkfmnqlvtg ylpsvilmlf
      481 myavpptmml fstiegnvsh serkksagik vlyftiwnvf fvnvlsgsii rqlsvfssfr
      541 diptqlakav ptqatfftty vltsgwasls ceviqlfpll cngfrrfilr rqeepcsnha
      601 ltfphhteip rlllfgllgf tcsimaplil pfllvyffla flvyrnqiln vyvpkyesgg
      661 qfwpvvhntt ifslvltqvi algvfgikrs pvasgftipl ifltllfney crqrfspvfk
      721 rspaqvliem dkqdenwgra eeiykllrta ycqfpllsld lstsqelsma gnsgqnkdeg
      781 sskdqeshnp dlneiklss
//
LOCUS       XP_016707590             799 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707590
VERSION     XP_016707590.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707590.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..799
                     /product="CSC1-like protein RXW8 isoform X1"
                     /calculated_mol_wt=90825
     Region          5..720
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          417..684
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..799
                     /gene="LOC107922206"
                     /coded_by="XM_016852101.2:347..2746"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mdigalltsa giniaicvvl lslysilrkq psnvsvyfmr rlisepikhs dpfrferlvp
       61 saswivrawq atneeilaag gvdalvflri vvfsirvfii aamicvflll pvnyygqemq
      121 hkqihsesle vftignvkeg skwfwthcla lyviscsacv llhfeyknit kmrlahitgs
      181 pvnpshftvl vrsipcsqnh sysksvedff styypasyvs hqmvyragrv dklmkdaekm
      241 yrmlktiest tkksympccl cgksthsfea lnndaesvei ktssdelqps qrekklkise
      301 qkdvekiyrk lktietqnkm sstpgclcgg imhyfkmlkk eaesveckts sdrsqpsqtd
      361 kerpaafvff rtryaaivaa qvlqssnpml wvtqlapepn dvywsnlsip ykqvwlrkia
      421 tllgafvfmf vflapvtfvq gltqldqlrq tfpflkgilk qkfmnqlvtg ylpsvilmlf
      481 myavpptmml fstiegnvsh serkksagik vlyftiwnvf fvnvlsgsii rqlsvfssfr
      541 diptqlakav ptqatfftty vltsgwasls ceviqlfpll cngfrrfilr rqeepcsnha
      601 ltfphhteip rlllfgllgf tcsimaplil pfllvyffla flvyrnqiln vyvpkyesgg
      661 qfwpvvhntt ifslvltqvi algvfgikrs pvasgftipl ifltllfney crqrfspvfk
      721 rspaqvliem dkqdenwgra eeiykllrta ycqfpllsld lstsqelsma gnsgqnkdeg
      781 sskdqeshnp dlneiklss
//
LOCUS       XP_016707591             798 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016707591
VERSION     XP_016707591.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852102.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707591.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..798
                     /product="CSC1-like protein RXW8 isoform X2"
                     /calculated_mol_wt=90696
     Region          5..719
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          416..683
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..798
                     /gene="LOC107922206"
                     /coded_by="XM_016852102.2:472..2868"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mdigalltsa giniaicvvl lslysilrkq psnvsvyfmr rlisepikhs dpfrferlvp
       61 saswivrawq atneeilaag gvdalvflri vvfsirvfii aamicvflll pvnyygqemq
      121 hkqihsesle vftignvkeg skwfwthcla lyviscsacv llhfeyknit kmrlahitgs
      181 pvnpshftvl vrsipcsqnh sysksvedff styypasyvs hqmvyragrv dklmkdaekm
      241 yrmlktiest tkksympccl cgksthsfea lnndaesvei ktssdelqps qrekklkise
      301 qdvekiyrkl ktietqnkms stpgclcggi mhyfkmlkke aesvecktss drsqpsqtdk
      361 erpaafvffr tryaaivaaq vlqssnpmlw vtqlapepnd vywsnlsipy kqvwlrkiat
      421 llgafvfmfv flapvtfvqg ltqldqlrqt fpflkgilkq kfmnqlvtgy lpsvilmlfm
      481 yavpptmmlf stiegnvshs erkksagikv lyftiwnvff vnvlsgsiir qlsvfssfrd
      541 iptqlakavp tqatffttyv ltsgwaslsc eviqlfpllc ngfrrfilrr qeepcsnhal
      601 tfphhteipr lllfgllgft csimaplilp fllvyfflaf lvyrnqilnv yvpkyesggq
      661 fwpvvhntti fslvltqvia lgvfgikrsp vasgftipli fltllfneyc rqrfspvfkr
      721 spaqvliemd kqdenwgrae eiykllrtay cqfpllsldl stsqelsmag nsgqnkdegs
      781 skdqeshnpd lneiklss
//
LOCUS       XP_016707592             732 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016707592
VERSION     XP_016707592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..732
                     /product="CSC1-like protein RXW8 isoform X3"
                     /calculated_mol_wt=83168
     Region          5..653
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          350..617
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..732
                     /gene="LOC107922206"
                     /coded_by="XM_016852103.2:471..2669"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mdigalltsa giniaicvvl lslysilrkq psnvsvyfmr rlisepikhs dpfrferlvp
       61 saswivrawq atneeilaag gvdalvflri vvfsirvfii aamicvflll pvnyygqemq
      121 hkqihsesle vftignvkeg skwfwthcla lyviscsacv llhfeyknit kmrlahitgs
      181 pvnpshftvl vrsipcsqnh sysksvedff styypasyvs hqmvyragrv dklmkdveki
      241 yrklktietq nkmsstpgcl cggimhyfkm lkkeaesvec ktssdrsqps qtdkerpaaf
      301 vffrtryaai vaaqvlqssn pmlwvtqlap epndvywsnl sipykqvwlr kiatllgafv
      361 fmfvflapvt fvqgltqldq lrqtfpflkg ilkqkfmnql vtgylpsvil mlfmyavppt
      421 mmlfstiegn vshserkksa gikvlyftiw nvffvnvlsg siirqlsvfs sfrdiptqla
      481 kavptqatff ttyvltsgwa slsceviqlf pllcngfrrf ilrrqeepcs nhaltfphht
      541 eiprlllfgl lgftcsimap lilpfllvyf flaflvyrnq ilnvyvpkye sggqfwpvvh
      601 nttifslvlt qvialgvfgi krspvasgft iplifltllf neycrqrfsp vfkrspaqvl
      661 iemdkqdenw graeeiykll rtaycqfpll sldlstsqel smagnsgqnk degsskdqes
      721 hnpdlneikl ss
//
LOCUS       XP_016707594             707 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016707594
VERSION     XP_016707594.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852105.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707594.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..707
                     /product="CSC1-like protein RXW8 isoform X4"
                     /calculated_mol_wt=80662
     Region          16..628
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          325..592
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..707
                     /gene="LOC107922206"
                     /coded_by="XM_016852105.2:221..2344"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mlaiiskhll kcfhnsimdv nyygqemqhk qihseslevf tignvkegsk wfwthclaly
       61 viscsacvll hfeyknitkm rlahitgspv npshftvlvr sipcsqnhsy sksvedffst
      121 yypasyvshq mvyragrvdk lmkdaekmyr mlktiesttk ksympcclcg ksthsfealn
      181 ndaesveikt ssdelqpsqr ekklkiseqk dvekiyrklk tietqnkmss tpgclcggim
      241 hyfkmlkkea esvecktssd rsqpsqtdke rpaafvffrt ryaaivaaqv lqssnpmlwv
      301 tqlapepndv ywsnlsipyk qvwlrkiatl lgafvfmfvf lapvtfvqgl tqldqlrqtf
      361 pflkgilkqk fmnqlvtgyl psvilmlfmy avpptmmlfs tiegnvshse rkksagikvl
      421 yftiwnvffv nvlsgsiirq lsvfssfrdi ptqlakavpt qatffttyvl tsgwaslsce
      481 viqlfpllcn gfrrfilrrq eepcsnhalt fphhteiprl llfgllgftc simaplilpf
      541 llvyfflafl vyrnqilnvy vpkyesggqf wpvvhnttif slvltqvial gvfgikrspv
      601 asgftiplif ltllfneycr qrfspvfkrs paqvliemdk qdenwgraee iykllrtayc
      661 qfpllsldls tsqelsmagn sgqnkdegss kdqeshnpdl neiklss
//
LOCUS       XP_016707595             697 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016707595
VERSION     XP_016707595.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707595.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..697
                     /product="CSC1-like protein RXW8 isoform X5"
                     /calculated_mol_wt=79496
     Region          2..618
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          315..582
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..697
                     /gene="LOC107922206"
                     /coded_by="XM_016852106.2:317..2410"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 micvflllpv nyygqemqhk qihseslevf tignvkegsk wfwthclaly viscsacvll
       61 hfeyknitkm rlahitgspv npshftvlvr sipcsqnhsy sksvedffst yypasyvshq
      121 mvyragrvdk lmkdaekmyr mlktiesttk ksympcclcg ksthsfealn ndaesveikt
      181 ssdelqpsqr ekklkiseqk dvekiyrklk tietqnkmss tpgclcggim hyfkmlkkea
      241 esvecktssd rsqpsqtdke rpaafvffrt ryaaivaaqv lqssnpmlwv tqlapepndv
      301 ywsnlsipyk qvwlrkiatl lgafvfmfvf lapvtfvqgl tqldqlrqtf pflkgilkqk
      361 fmnqlvtgyl psvilmlfmy avpptmmlfs tiegnvshse rkksagikvl yftiwnvffv
      421 nvlsgsiirq lsvfssfrdi ptqlakavpt qatffttyvl tsgwaslsce viqlfpllcn
      481 gfrrfilrrq eepcsnhalt fphhteiprl llfgllgftc simaplilpf llvyfflafl
      541 vyrnqilnvy vpkyesggqf wpvvhnttif slvltqvial gvfgikrspv asgftiplif
      601 ltllfneycr qrfspvfkrs paqvliemdk qdenwgraee iykllrtayc qfpllsldls
      661 tsqelsmagn sgqnkdegss kdqeshnpdl neiklss
//
LOCUS       XP_016707596             681 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016707596
VERSION     XP_016707596.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707596.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..681
                     /product="CSC1-like protein RXW8 isoform X6"
                     /calculated_mol_wt=77612
     Region          7..602
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          299..566
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..681
                     /gene="LOC107922206"
                     /coded_by="XM_016852107.2:312..2357"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mqhkqihses levftignvk egskwfwthc lalyviscsa cvllhfeykn itkmrlahit
       61 gspvnpshft vlvrsipcsq nhsysksved ffstyypasy vshqmvyrag rvdklmkdae
      121 kmyrmlktie sttkksympc clcgksthsf ealnndaesv eiktssdelq psqrekklki
      181 seqkdvekiy rklktietqn kmsstpgclc ggimhyfkml kkeaesveck tssdrsqpsq
      241 tdkerpaafv ffrtryaaiv aaqvlqssnp mlwvtqlape pndvywsnls ipykqvwlrk
      301 iatllgafvf mfvflapvtf vqgltqldql rqtfpflkgi lkqkfmnqlv tgylpsvilm
      361 lfmyavpptm mlfstiegnv shserkksag ikvlyftiwn vffvnvlsgs iirqlsvfss
      421 frdiptqlak avptqatfft tyvltsgwas lsceviqlfp llcngfrrfi lrrqeepcsn
      481 haltfphhte iprlllfgll gftcsimapl ilpfllvyff laflvyrnqi lnvyvpkyes
      541 ggqfwpvvhn ttifslvltq vialgvfgik rspvasgfti plifltllfn eycrqrfspv
      601 fkrspaqvli emdkqdenwg raeeiykllr taycqfplls ldlstsqels magnsgqnkd
      661 egsskdqesh npdlneikls s
//
LOCUS       XP_040943742             681 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943742
VERSION     XP_040943742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087808.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..681
                     /product="CSC1-like protein RXW8 isoform X6"
                     /calculated_mol_wt=77612
     Region          7..602
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          299..566
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..681
                     /gene="LOC107922206"
                     /coded_by="XM_041087808.1:937..2982"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mqhkqihses levftignvk egskwfwthc lalyviscsa cvllhfeykn itkmrlahit
       61 gspvnpshft vlvrsipcsq nhsysksved ffstyypasy vshqmvyrag rvdklmkdae
      121 kmyrmlktie sttkksympc clcgksthsf ealnndaesv eiktssdelq psqrekklki
      181 seqkdvekiy rklktietqn kmsstpgclc ggimhyfkml kkeaesveck tssdrsqpsq
      241 tdkerpaafv ffrtryaaiv aaqvlqssnp mlwvtqlape pndvywsnls ipykqvwlrk
      301 iatllgafvf mfvflapvtf vqgltqldql rqtfpflkgi lkqkfmnqlv tgylpsvilm
      361 lfmyavpptm mlfstiegnv shserkksag ikvlyftiwn vffvnvlsgs iirqlsvfss
      421 frdiptqlak avptqatfft tyvltsgwas lsceviqlfp llcngfrrfi lrrqeepcsn
      481 haltfphhte iprlllfgll gftcsimapl ilpfllvyff laflvyrnqi lnvyvpkyes
      541 ggqfwpvvhn ttifslvltq vialgvfgik rspvasgfti plifltllfn eycrqrfspv
      601 fkrspaqvli emdkqdenwg raeeiykllr taycqfplls ldlstsqels magnsgqnkd
      661 egsskdqesh npdlneikls s
//
LOCUS       XP_016707597             681 aa            linear   PLN 06-AUG-2024
DEFINITION  CSC1-like protein RXW8 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016707597
VERSION     XP_016707597.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852108.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707597.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..681
                     /product="CSC1-like protein RXW8 isoform X6"
                     /calculated_mol_wt=77612
     Region          7..602
                     /region_name="COG5594"
                     /note="Uncharacterized integral membrane protein [Function
                     unknown]"
                     /db_xref="CDD:227881"
     Region          299..566
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..681
                     /gene="LOC107922206"
                     /coded_by="XM_016852108.2:202..2247"
                     /db_xref="GeneID:107922206"
ORIGIN      
        1 mqhkqihses levftignvk egskwfwthc lalyviscsa cvllhfeykn itkmrlahit
       61 gspvnpshft vlvrsipcsq nhsysksved ffstyypasy vshqmvyrag rvdklmkdae
      121 kmyrmlktie sttkksympc clcgksthsf ealnndaesv eiktssdelq psqrekklki
      181 seqkdvekiy rklktietqn kmsstpgclc ggimhyfkml kkeaesveck tssdrsqpsq
      241 tdkerpaafv ffrtryaaiv aaqvlqssnp mlwvtqlape pndvywsnls ipykqvwlrk
      301 iatllgafvf mfvflapvtf vqgltqldql rqtfpflkgi lkqkfmnqlv tgylpsvilm
      361 lfmyavpptm mlfstiegnv shserkksag ikvlyftiwn vffvnvlsgs iirqlsvfss
      421 frdiptqlak avptqatfft tyvltsgwas lsceviqlfp llcngfrrfi lrrqeepcsn
      481 haltfphhte iprlllfgll gftcsimapl ilpfllvyff laflvyrnqi lnvyvpkyes
      541 ggqfwpvvhn ttifslvltq vialgvfgik rspvasgfti plifltllfn eycrqrfspv
      601 fkrspaqvli emdkqdenwg raeeiykllr taycqfplls ldlstsqels magnsgqnkd
      661 egsskdqesh npdlneikls s
//
LOCUS       XP_016706581             222 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706581
VERSION     XP_016706581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851092.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..222
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25230
     CDS             1..222
                     /gene="LOC107921210"
                     /coded_by="XM_016851092.2:332..1000"
                     /db_xref="GeneID:107921210"
ORIGIN      
        1 malltssllp sslnikvkqy ehqsccyqlh nfhrlsrkch lkitmaqfwe pnkmkeqlnt
       61 ikerlwensp dsvkafpwkk aenllldkll vagnkalkls ivtvfvfscl sdfihsiyrn
      121 qelmipfgli vgvlmsdflk qtsqeafrss egkdlemkwq vlwmgglfvv iklvcawfgi
      181 gtrvfllhva ngglmqvlwq wrsslaengs medgstpssa es
//
LOCUS       XP_016706582             178 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706582
VERSION     XP_016706582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851093.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..178
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=20077
     CDS             1..178
                     /gene="LOC107921210"
                     /coded_by="XM_016851093.2:497..1033"
                     /db_xref="GeneID:107921210"
ORIGIN      
        1 maqfwepnkm keqlntiker lwenspdsvk afpwkkaenl lldkllvagn kalklsivtv
       61 fvfsclsdfi hsiyrnqelm ipfglivgvl msdflkqtsq eafrssegkd lemkwqvlwm
      121 gglfvviklv cawfgigtrv fllhvanggl mqvlwqwrss laengsmedg stpssaes
//
LOCUS       XP_016706985             227 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00820-like [Gossypium
            hirsutum].
ACCESSION   XP_016706985
VERSION     XP_016706985.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851496.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706985.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..227
                     /product="uncharacterized mitochondrial protein
                     AtMg00820-like"
                     /calculated_mol_wt=25521
     Region          82..>184
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     CDS             1..227
                     /gene="LOC107921670"
                     /coded_by="XM_016851496.2:368..1051"
                     /db_xref="GeneID:107921670"
ORIGIN      
        1 mlsppmsslp papasdpspl kkstrnshpp nkygyspkif gyhksiiatl ssikipesyl
       61 eaiqhacwqq aiqderdalh hnqtwdivtc pfdvtpigck wvfsiklkyd gsldrckarl
      121 valdnrqeyg idyketfppv vkmttvrtil alaasqdwsi nqmdvknafl hrdlteniym
      181 rsppslttaa nelalllill livmligrdv lihstlqkdg vytwvml
//
LOCUS       XP_016707673             720 aa            linear   PLN 06-AUG-2024
DEFINITION  protein VAC14 homolog isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016707673
VERSION     XP_016707673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852184.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..720
                     /product="protein VAC14 homolog isoform X1"
                     /calculated_mol_wt=80650
     Region          12..33
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          65..161
                     /region_name="Vac14_Fab1_bd"
                     /note="Vacuolar 14 Fab1-binding region; pfam12755"
                     /db_xref="CDD:403838"
     Site            order(74,77,80..81,109..110,113,116..117,120,150..151,153,
                     156..157,160,191..192,195,198..199,232..233,236,239..240)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          <89..>422
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          92..120
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          132..161
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          173..199
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          212..241
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          251..282
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          294..319
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          430..608
                     /region_name="Vac14_Fig4_bd"
                     /note="Vacuolar protein 14 C-terminal Fig4p binding;
                     pfam11916"
                     /db_xref="CDD:463395"
     CDS             1..720
                     /gene="LOC107922251"
                     /coded_by="XM_016852184.2:301..2463"
                     /db_xref="GeneID:107922251"
ORIGIN      
        1 madalsvipa svlrnlsdkl yekrknaale vegivkqlal sgdhekisav ikllakefty
       61 spqanhrkgg liglaaatvg ltseaaqhle qivppvlnsl sdqdsrvryy acealyniak
      121 vvrgdliiff nqifdalckl sadsdanvqs aahlldrlvk divtesdqfs ieefipllre
      181 rmnvlnpyvr qflvgwitvl dsvpdidmlg flpdfldglf nmlsdsspei rqqadsalse
      241 flqeiknsps vdygrmaeil vqraaspdef trltaitwin efvklggdql vpyyadilga
      301 ilpcisdkee kirvvaretn eelrsiksdp aetfdvgail yiarrqldse weatriealh
      361 wistlldrhr aevlcflndi fdtllkalsd ssdevvllvl dihaciardp qhfrqlivfl
      421 vhnfrvdhsl lerrgaliir rlcvlldaer vyrelstile geadldfaci mvqalnlill
      481 tsselsvlre llkqslvnaa gkdlfvslya swchspmail slcllaqayq hasaviqslv
      541 eedinvkflv qldklirlle tpifaylrlq llepgryiwl lkalygllml lpqqsaafki
      601 lrtrlktvps hsfngdqlkr assgnpcsqi lhysgsqite dgnlrqdngn lqnginfasr
      661 lqqfvqmqrq hrmleksqeq siarssstls kegpeaeesr gpqtsnsnlp psrssrrglg
//
LOCUS       XP_040943743             677 aa            linear   PLN 06-AUG-2024
DEFINITION  protein VAC14 homolog isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943743
VERSION     XP_040943743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087809.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..677
                     /product="protein VAC14 homolog isoform X2"
                     /calculated_mol_wt=75668
     Region          12..33
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          65..161
                     /region_name="Vac14_Fab1_bd"
                     /note="Vacuolar 14 Fab1-binding region; pfam12755"
                     /db_xref="CDD:403838"
     Site            order(74,77,80..81,109..110,113,116..117,120,150..151,153,
                     156..157,160,191..192,195,198..199,232..233,236,239..240)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          <89..>422
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          92..120
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          132..161
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          173..199
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          212..241
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          251..282
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          294..319
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          430..565
                     /region_name="Vac14_Fig4_bd"
                     /note="Vacuolar protein 14 C-terminal Fig4p binding;
                     pfam11916"
                     /db_xref="CDD:463395"
     CDS             1..677
                     /gene="LOC107922251"
                     /coded_by="XM_041087809.1:301..2334"
                     /db_xref="GeneID:107922251"
ORIGIN      
        1 madalsvipa svlrnlsdkl yekrknaale vegivkqlal sgdhekisav ikllakefty
       61 spqanhrkgg liglaaatvg ltseaaqhle qivppvlnsl sdqdsrvryy acealyniak
      121 vvrgdliiff nqifdalckl sadsdanvqs aahlldrlvk divtesdqfs ieefipllre
      181 rmnvlnpyvr qflvgwitvl dsvpdidmlg flpdfldglf nmlsdsspei rqqadsalse
      241 flqeiknsps vdygrmaeil vqraaspdef trltaitwin efvklggdql vpyyadilga
      301 ilpcisdkee kirvvaretn eelrsiksdp aetfdvgail yiarrqldse weatriealh
      361 wistlldrhr aevlcflndi fdtllkalsd ssdevvllvl dihaciardp qhfrqlivfl
      421 vhnfrvdhsl lerrgaliir rlcvlldaer vyrelstile geadldfaci mvqalnlill
      481 tsselsvlre llkqslvnaa gkdlfvslya swchspmail slcllaqlle pgryiwllka
      541 lygllmllpq qsaafkilrt rlktvpshsf ngdqlkrass gnpcsqilhy sgsqitedgn
      601 lrqdngnlqn ginfasrlqq fvqmqrqhrm leksqeqsia rssstlskeg peaeesrgpq
      661 tsnsnlppsr ssrrglg
//
LOCUS       XP_016706549             197 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML25 [Gossypium hirsutum].
ACCESSION   XP_016706549
VERSION     XP_016706549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="probable calcium-binding protein CML25"
                     /calculated_mol_wt=21733
     Region          38..182
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..197
                     /gene="LOC107921182"
                     /coded_by="XM_016851060.2:334..927"
                     /db_xref="GeneID:107921182"
ORIGIN      
        1 mgfgsifnrk kklrsrnltd sptvsssgsl flqspvrnft qtqlqeieev fkkfdangdg
       61 kisaselgsi mkslgqqpsd eelhnmikef dadgdgfinf nefielntkg vdseevlenl
      121 kdafsvydid gngwisaeel hevlkslgee csiaecrkmi sgvdndgngm idfeefkvmm
      181 magatfvsmd skrdval
//
LOCUS       XP_016706592             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706592
VERSION     XP_016706592.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016706592.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15816
     CDS             1..136
                     /gene="LOC107921223"
                     /coded_by="XM_016851103.2:57..467"
                     /db_xref="GeneID:107921223"
ORIGIN      
        1 msfsvlspyl ykpfklsalq nkkqvykalg vkqqhlqfan lpkkkqnerv rirftnmeqk
       61 kinhennnnk aairdedgyk gvpihsqvmk ikrefekikh pslqqadmrr vlreitrqrs
      121 rsplglaerp iavghs
//
LOCUS       XP_016753237             175 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LSM12 homolog [Gossypium hirsutum].
ACCESSION   XP_016753237
VERSION     XP_016753237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..175
                     /product="protein LSM12 homolog"
                     /calculated_mol_wt=19572
     Region          77..160
                     /region_name="AD"
                     /note="Anticodon-binding domain; pfam09793"
                     /db_xref="CDD:462905"
     CDS             1..175
                     /gene="LOC107961671"
                     /coded_by="XM_016897748.2:124..651"
                     /db_xref="GeneID:107961671"
ORIGIN      
        1 megeefavgc flsikttlgd efegqiisfd rlsnilvlqe glesgprrni rllkanyike
       61 fsllrqdedp ldvkkcfldl tslqaredsa irqaeadser fgvgvtseaq tlfdalsktl
      121 pvrwdktviv vmnevrvssp ylpesvsggt paanervrkv leferkrmqt rgtsq
//
LOCUS       XP_016707992             605 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional purine biosynthesis protein PurH isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016707992
VERSION     XP_016707992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852503.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..605
                     /product="bifunctional purine biosynthesis protein PurH
                     isoform X1"
                     /calculated_mol_wt=65757
     Region          60..605
                     /region_name="PLN02891"
                     /note="IMP cyclohydrolase"
                     /db_xref="CDD:178479"
     CDS             1..605
                     /gene="LOC107922457"
                     /coded_by="XM_016852503.2:119..1936"
                     /db_xref="GeneID:107922457"
ORIGIN      
        1 mlgtaasaat ispttahaan tirrafhsnp fnslssfhhs ilcarfrcls lrsftavstk
       61 amshpqtlda phpqssaagn kqalislsdk kdlallgsgl qelgytivst ggtasalena
      121 gvsvtkveql tcfpemvldg rvktlhpnih ggilarrdqk hhmealnkyg igtfdvvvvn
      181 lypfydkvts mggiafddgi enidiggpam iraaaknhkd vlvvvdsqdy aallefldgs
      241 qddqqfrrkl awkafehvas ydsavsewlw kqtvgdkfpp sltvplslks slrygenphq
      301 kaafyvdksl sevnaggiat aiqhhgkems ynnyldadaa wncvsefrnp tcvvvkhtnp
      361 cgvasrddil eayrlavkad pvsafggiva fnievdeala keirefrspt dgetrmfyei
      421 vvapkytekg leilrgkskt lrileakkne kgklslrqvg ggwlaqdsdd ltpediqfnv
      481 vsekkpqdne lcdaefawlc vkhvksnaiv iakdnrmlgm gsgqpnrles lrialrkagd
      541 evkgaalasd affpfawkda veeacesgig viaepggsir dgdavdccnk ygvsllltnv
      601 rhfkh
//
LOCUS       XP_016707993             604 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional purine biosynthesis protein PurH isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016707993
VERSION     XP_016707993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852504.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..604
                     /product="bifunctional purine biosynthesis protein PurH
                     isoform X2"
                     /calculated_mol_wt=65658
     Region          60..604
                     /region_name="PLN02891"
                     /note="IMP cyclohydrolase"
                     /db_xref="CDD:178479"
     CDS             1..604
                     /gene="LOC107922457"
                     /coded_by="XM_016852504.2:119..1933"
                     /db_xref="GeneID:107922457"
ORIGIN      
        1 mlgtaasaat ispttahaan tirrafhsnp fnslssfhhs ilcarfrcls lrsftavstk
       61 amshpqtlda phpqssaagn kqalislsdk kdlallgsgl qelgytivst ggtasalena
      121 gvsvtkveql tcfpemldgr vktlhpnihg gilarrdqkh hmealnkygi gtfdvvvvnl
      181 ypfydkvtsm ggiafddgie nidiggpami raaaknhkdv lvvvdsqdya allefldgsq
      241 ddqqfrrkla wkafehvasy dsavsewlwk qtvgdkfpps ltvplslkss lrygenphqk
      301 aafyvdksls evnaggiata iqhhgkemsy nnyldadaaw ncvsefrnpt cvvvkhtnpc
      361 gvasrddile ayrlavkadp vsafggivaf nievdealak eirefrsptd getrmfyeiv
      421 vapkytekgl eilrgksktl rileakknek gklslrqvgg gwlaqdsddl tpediqfnvv
      481 sekkpqdnel cdaefawlcv khvksnaivi akdnrmlgmg sgqpnrlesl rialrkagde
      541 vkgaalasda ffpfawkdav eeacesgigv iaepggsird gdavdccnky gvsllltnvr
      601 hfkh
//
LOCUS       XP_016715597             383 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016715597
VERSION     XP_016715597.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860108.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715597.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..383
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43115
     Region          28..139
                     /region_name="BTB_POZ_SKP1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in S-phase
                     kinase-associated protein 1 (SKP1) and similar proteins;
                     cd18322"
                     /db_xref="CDD:349631"
     Site            order(50..51,55,59,63..64,66,68..69,117,120..121,123)
                     /site_type="other"
                     /note="cullin binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Site            order(109,113,117,120,125,129,132..133,135..136,139)
                     /site_type="other"
                     /note="F-box protein binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Region          125..172
                     /region_name="Skp1"
                     /note="Skp1 family, dimerization domain; pfam01466"
                     /db_xref="CDD:460222"
     Region          189..300
                     /region_name="BTB_POZ_SKP1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in S-phase
                     kinase-associated protein 1 (SKP1) and similar proteins;
                     cd18322"
                     /db_xref="CDD:349631"
     Site            order(211..212,216,220,224..225,227,229..230,278,281..282,
                     284)
                     /site_type="other"
                     /note="cullin binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Site            order(270,274,278,281,286,290,293..294,296..297,300)
                     /site_type="other"
                     /note="F-box protein binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Region          286..333
                     /region_name="Skp1"
                     /note="Skp1 family, dimerization domain; pfam01466"
                     /db_xref="CDD:460222"
     Region          <335..362
                     /region_name="zf-RVT"
                     /note="zinc-binding in reverse transcriptase; pfam13966"
                     /db_xref="CDD:433612"
     CDS             1..383
                     /gene="LOC107928830"
                     /coded_by="XM_016860108.2:3..1154"
                     /db_xref="GeneID:107928830"
ORIGIN      
        1 milslrfsrs lfglgflqpt tmastskkii vkssdgetfe vdeavalklq pikcmieddc
       61 adgeipipiv tgkilakvle ycnkhvdvky gvvntefedw eadfvkvdqn tlfdlilaan
      121 fleikslldl tcktvanmmk gkspveirkt fnikndftpe eeeeirrena wafdgflqpp
      181 tmasstskkv tlkssdgvif vvdeavalks qtiknmiedd cadgeiptpg vtgntlakvl
      241 efctkhvddr ddelptkfkd wdanfakvdq ntlfyltlaa nflniksllg lmcqtvadmi
      301 kgkspeeirk tfniendftp eeeeeirren awafnnerkr rhmtidarce vcevedetld
      361 hvaswmycsi ghleaiglrg etc
//
LOCUS       XP_016715601             779 aa            linear   PLN 06-AUG-2024
DEFINITION  FT-interacting protein 3 [Gossypium hirsutum].
ACCESSION   XP_016715601
VERSION     XP_016715601.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016860112.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016715601.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..779
                     /product="FT-interacting protein 3"
                     /calculated_mol_wt=88621
     Region          <7..58
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          159..285
                     /region_name="C2B_MCTP_PRT_plant"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd08378"
                     /db_xref="CDD:176024"
     Site            order(180,227,229,235)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176024"
     Region          322..471
                     /region_name="C2C_MCTP_PRT_plant"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); plant subset;
                     cd04019"
                     /db_xref="CDD:175986"
     Site            order(337,343,391,393,399)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175986"
     Region          483..>573
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          692..>777
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..779
                     /gene="LOC107928837"
                     /coded_by="XM_016860112.2:1..2340"
                     /db_xref="GeneID:107928837"
ORIGIN      
        1 mfagvdlttv evegdsltvi rklqkeeier seialescvf khvprqansa ahvlateglk
       61 reeapyligd vplyakrtve dderwlalst tadgrrldpl fqrvnlfnfr sslsrghctm
      121 avekvdfslk etspnigsdr vsggekltss fdlvekmefl fvrivrardl plkavngiid
      181 pyfeikigny nattkyfekk pdfewnqlfa fgqdrlqatt meitvrdkel iigdnmigki
      241 tvalhevppc fppdsplasq wykledkngf tlrkgelmla mwystqadrv ftdawhsdsa
      301 ivsgesllnt rskaylsprl wylrvnviqa rdlvpgskdr npqvyvkavv gdvilrtrvs
      361 pdknvnpqwn edlmfvvaep ffdslivtve drlenntvqc lgkcvtrlsn veqrllplpa
      421 dplwytledi vfedgmekea nffsklnmcv sldggyhvfd esvhngsdyr ptakmlwtam
      481 igvlelgiin asglqpmklr dsrettdayc vakygpkwvk trtvvdsfdp kwneqfswdv
      541 ydlytmltig vfddchlhgg davgdgkdps lgklisglhh esfvasnasy lpsfdiptry
      601 fketsrsysl feskpnrtav kargcgvhld ggsqmwslrk akanfqrfla tfkcfsnarq
      661 wfdeirkwnn saatvlvmai yciivfkpdl ilptvtlysi qvmilqwrkr qrrpthidvn
      721 lsvagsvtad eldeefdtfp ssrqfdvlrm rydrlrsiag rivtvisdia tqverfhyc
//
LOCUS       XP_040943745             167 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 1-like [Gossypium hirsutum].
ACCESSION   XP_040943745
VERSION     XP_040943745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087811.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..167
                     /product="phytosulfokine receptor 1-like"
                     /calculated_mol_wt=18461
     Region          <1..>99
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          15..38
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..167
                     /gene="LOC121214069"
                     /coded_by="XM_041087811.1:1..504"
                     /db_xref="GeneID:121214069"
ORIGIN      
        1 msgtiwpsfg nlrrlhvlnl nknrlrgsip eslsgmknle tldlsrnkls gkyqnhlcss
       61 vfcpssvwhn elygeipmgg qfmtfpsssf qrnnglcggp yipcslqqap vdespseamt
      121 vfgpqfgfgv atgfvltiiv cfmsgwilpr kttfkyrcft sksshhd
//
LOCUS       XP_040943746             778 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein SUMM2 [Gossypium hirsutum].
ACCESSION   XP_040943746
VERSION     XP_040943746.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087812.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..778
                     /product="disease resistance protein SUMM2"
                     /calculated_mol_wt=89169
     Region          <144..314
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          428..449
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <438..>616
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          450..483
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          484..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          507..531
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          620..638
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          639..661
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          662..697
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..778
                     /gene="LOC121214071"
                     /coded_by="XM_041087812.1:1..2337"
                     /db_xref="GeneID:121214071"
ORIGIN      
        1 mqqqellmhn haaeallhas mtelhgaqgd ltsrvriaed eqqhkrlnqv egwlqradhv
       61 vadadqlsre spqqveklcm ggccsrhprs thkfgkqiat ilqevkhlke ngdfsdvark
      121 pplpsatkrp septvglesy vnqvwsiasq drpiekvqde iakriglsne gwesrsrdek
      181 agdifnvlcr kkfalllddi werfdltgag vplptqgngs kvifttrsrd vccqmqpnma
      241 nnikveclpp gkalklfeek dylslsltig ramaskktpp eweyaievlr qsaasvfpgv
      301 gkemypklkf sydsltserv kscflycsly pedhpiqide lihcwigegf mdehtdlsta
      361 rnqgrffigs lieacllekv rfsdrvrmhd vvrdmalwiv gefekdkflv ksgvqlkelp
      421 eaekweeirr mslmdnqien lteilecpnl qtlflssndl kgsrlvrqye feelpvgiak
      481 lvslehlnls ftkirklpve lraleklkyl nlewtrdlem ipqqlissfs klqvlkmmrc
      541 gygcsllled lehlkylnvl tltfrsasel ekasrfnkff scaiehvsll dfrdsrslni
      601 lalanlqnlc sikctncmdl kevkiesniv egaryfhslr yvgltyckqm mdvswvifap
      661 hlekllirgc nsleeiisee kvdevtdska ntnlfsrleq ldlcrlpkmk tiychalpfp
      721 rlkkisivkc pmlkklplns nsakgqrlii kgekgwwkdv ewedestrta flpsfrpq
//
LOCUS       XP_040943747             412 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein At4g10780 [Gossypium hirsutum].
ACCESSION   XP_040943747
VERSION     XP_040943747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087813.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..412
                     /product="putative disease resistance protein At4g10780"
                     /calculated_mol_wt=47196
     Region          156..>284
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..412
                     /gene="LOC121214072"
                     /coded_by="XM_041087813.1:1..1239"
                     /db_xref="GeneID:121214072"
ORIGIN      
        1 msnifsisls ldtiitrcwd saflckleen lpalkpeved lkatrrdlms rvrfaedekq
       61 lkrlpqvdlw lrglivhprs thkfgkqiat ilqevkdmke ngdfsdvack ppipfankrp
      121 sdptvclesy virlelsskg tsgnychiwl rrgwqttlln qinnkfhdts hdyhviwava
      181 sqdrpiekvq nqiakrigls negwefksrd ekagdifnvl crkkfallld diwewfdltr
      241 agvplptqqn gskvifttrr ldvccqmqpn mdnnikvecl pqeklsncsr rratsrshyn
      301 warhgiqedp srmeyatevl rqsaasvlpg vgkeirlshp kdelvdcwig eglldehanl
      361 snarnqghfi igslidacll ekgqynvsvk mhdvirdmal wiagesekek fl
//
LOCUS       XP_040943748             618 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At1g12290 [Gossypium hirsutum].
ACCESSION   XP_040943748
VERSION     XP_040943748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087814.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..618
                     /product="probable disease resistance protein At1g12290"
                     /calculated_mol_wt=69885
     Region          <97..255
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          405..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          469..507
                     /region_name="LRR_4"
                     /note="Leucine Rich repeats (2 copies); pfam12799"
                     /db_xref="CDD:463713"
     Region          470..492
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          493..515
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          516..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..618
                     /gene="LOC121214076"
                     /coded_by="XM_041087814.1:1..1857"
                     /db_xref="GeneID:121214076"
ORIGIN      
        1 mdcnatvddd adqqlqqism ragpeaayyv wevvvpgipg pptssgsksp dtprgedmke
       61 kghfsdvayk ppipsadkrp sdptvglesy vnqsldekag dirsilynrr falllddiwe
      121 wfdltraglp lptqengskv ifttrrldvc cqmqpnmdni sewnvyhqek lstvrgegwi
      181 rnpsmhpdic klaeavveec aglplaliti gramaskktr reweyatevl rqsaasvlpg
      241 vgkemypklk fsydsltser vkycflycsl ypedyliekd elvdcwigeg lldehtnlsn
      301 arnqghfiig slidacllek ednhfvkmhd virdtalwia gesengrffv ksgaqlkeqp
      361 kakkweenen leelpvgias gftrnltchs qnkkvagrie gpeklkylnl ectvdlemip
      421 qqlissisks aselekasrf nkffscaieh vglldfrdsr slnimalakl qhlsltgcnh
      481 lrdvswvtfa phleelwiyg cngleeiise eklgevaelk gnlnlfskld yllldglpkl
      541 ktiyhhalpf pqlkkvhitg cpmlkklpln snsakgqrli iegqerwwkg vewedeftri
      601 aflptfkpli seemldtn
//
LOCUS       XP_040943749             491 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein SUMM2 [Gossypium hirsutum].
ACCESSION   XP_040943749
VERSION     XP_040943749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087815.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..491
                     /product="disease resistance protein SUMM2"
                     /calculated_mol_wt=56976
     Region          103..>273
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          125..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          195..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..491
                     /gene="LOC121214077"
                     /coded_by="XM_041087815.1:1..1476"
                     /db_xref="GeneID:121214077"
ORIGIN      
        1 mypklkfsyd sltservksc flycslyped hpiqidelih cwigegfmde htdlstarnq
       61 grffigslie acllekvrfs drvrmhdvvr dmalwivgef ekdkflvksg vqlkelpeae
      121 kweeirrmsl mdnqienlte ilecpnlqtl flssndlkvi mddffnsmpm lrvldlsdnt
      181 nfeelpvgia klvslehlnl sftkirklpv elraleklky lnlewtrdle mipqqlissf
      241 sklqvlkmmr cgygcsllle dlehlkylnv ltltfrsase lekasrfnkf fscaiehvsl
      301 ldfrdsrsln ilalanlqnl csikctncmd lkevkiesni vegaryfhsl ryvgltyckq
      361 mmdvswvifa phlekllirg cnsleeiise ekvdevtdsk antnlfsrle qldlcrlpkm
      421 ktiychalpf prlkkisivk cpmlkklpln snsakgqrli ikgekgwwkd vewedestrt
      481 aflplsdlsn l
//
LOCUS       XP_040943750             512 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein SUMM2 [Gossypium hirsutum].
ACCESSION   XP_040943750
VERSION     XP_040943750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087816.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..512
                     /product="disease resistance protein SUMM2"
                     /calculated_mol_wt=58222
     Region          154..397
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..512
                     /gene="LOC121214078"
                     /coded_by="XM_041087816.1:1..1539"
                     /db_xref="GeneID:121214078"
ORIGIN      
        1 msnifsisls ldtiitrcwd saflckleen lpalkpeved lkatrrdlms rvrfaedekq
       61 lkrlpqvdlw lqradrvitd adklivqspq hveklcmggc csrhprsthk fgkqiatilq
      121 evkdmkengd fsdvackppi pfankrpsdp tvclesyvnq vwsclqkeqv giiviyglgg
      181 vgkttllnqi nnkfhdtshd yhviwavasq drpiekvqnq iakriglsne gwefksrdek
      241 agdifnvlcr kkfalllddi wewfdltrag vplptqqngs kvifttrrld vccqmqpnmd
      301 nnikveclpp geafklfeek vgsetlrmhp dicklaeavv eecaglplal itigrgmask
      361 ktpreweyat evlrqsaasv lpgvgkemyp klkfsydclp derfrscfly cslypedyli
      421 qkdelvdcwi geglldehan lsnarnqghf iigslidacl lekgqynvsv kmhdvirdma
      481 lwiageseke kffvksgvql keqlkakkwe ee
//
LOCUS       XP_040943751             329 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein SUMM2-like [Gossypium hirsutum].
ACCESSION   XP_040943751
VERSION     XP_040943751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087817.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="disease resistance protein SUMM2-like"
                     /calculated_mol_wt=37811
     Region          <8..260
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          11..34
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          35..57
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          58..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          83..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          110..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          149..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..259
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..329
                     /gene="LOC121214079"
                     /coded_by="XM_041087817.1:1..990"
                     /db_xref="GeneID:121214079"
ORIGIN      
        1 mddffnfmpm lrvldsssnr nleelpvgia klvslehlnl swtgikklpv elkalaklky
       61 lnlnwtedlk mipqqlissf sklqvlkmeg cgygcllvle emehlkylnv ltltfksase
      121 lekasrfnkf fscaiecvel lhfrdsrsln imalaklqhl ctlilwncmd leevkierni
      181 iegagcfnsl rsvsvvecnh lrdvswitfa phlevlwiye cngleeiise eklgevtelk
      241 gnlnlfskle rllledlpel ktiyhhalpf pqlkevsirg cpmlkklpln snsakgqrli
      301 iegekgwwkd vewedestqi aflptfkpr
//
LOCUS       XP_040943752             236 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At1g52660 [Gossypium hirsutum].
ACCESSION   XP_040943752
VERSION     XP_040943752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087818.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..236
                     /product="probable disease resistance protein At1g52660"
                     /calculated_mol_wt=26198
     Region          27..236
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..236
                     /gene="LOC107933067"
                     /coded_by="XM_041087818.1:1..711"
                     /db_xref="GeneID:107933067"
ORIGIN      
        1 meisvmwlas hhflpqtkrp septvglesy vnqvwsslqk eqvgvigiya lggvgkttll
       61 nqinnkfhdt thdyrvtwav asqdrpiekv qdqiakrigl snegwesrsr dekagdifnv
      121 lcrkkfavll ddiwerfdlt gagvplptqq ngskvifttr srdvccqmqs nnnikveclp
      181 pgkalklfee kvgsetlqmh pdirklatav veecaglpla litigramas kktppe
//
LOCUS       XP_016720706             370 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RFL1-like [Gossypium hirsutum].
ACCESSION   XP_016720706
VERSION     XP_016720706.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865217.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720706.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..370
                     /product="disease resistance protein RFL1-like"
                     /calculated_mol_wt=42656
     Region          <88..>144
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..370
                     /gene="LOC107933066"
                     /coded_by="XM_016865217.2:1..1113"
                     /db_xref="GeneID:107933066"
ORIGIN      
        1 mllkflrqsa asvfpgvgke mypklkfsyd sltservksc flycsflped hpiqrdelih
       61 cwigegfmde htdlstarnq grfiigvqlk elpeaekwee itgmslmdnq ienlteilec
      121 pnlqtlflsn ndlkgsrlar qyefvriarr nckvgftrts qpvihknkkv agriegpgka
      181 eifesrvdtr srndptttyi qflqvasten demwlwidsr plnilalvnl qnlysikctn
      241 cmdlkevkie snivegaryf hslcfkeiis eekldevtds kantnlfsrl eeldlcrlpk
      301 mktisyhalp fpqlkkisiv kcpmlkklpl nsnsakgqrl iikgekgwwk dvewedestr
      361 taflpsfkpq
//
LOCUS       XP_016720704             651 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At1g15890 [Gossypium hirsutum].
ACCESSION   XP_016720704
VERSION     XP_016720704.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865215.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720704.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..651
                     /product="probable disease resistance protein At1g15890"
                     /calculated_mol_wt=73977
     Region          186..400
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <499..>639
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          513..534
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          535..558
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          559..582
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          583..605
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..651
                     /gene="LOC107933064"
                     /coded_by="XM_016865215.2:1..1956"
                     /db_xref="GeneID:107933064"
ORIGIN      
        1 mgnifsisld piitrcwdca tgqasyicnl ednlhdlqae vagleelrsd lmsrvriaed
       61 eqqlqrlnqv egwlsraetl indadqlivq spphvenlcm ggccsthprs sikfgkqiak
      121 klqevkdqke ngdfsdvask pplpsaterp septvglesn fikvwsclrk dqvgiigiyg
      181 lggvgkttll nqinnkfhds thdyhviwav asqdrpierv qdqiaerigl snegwksksl
      241 dekakdifqv lckkkfalll ddiwewfdli ragvplptqq ngskvifttr rydvccqmqp
      301 nmdnnirvec lppgeafklf eenvgsetlr mhldicklae tvveecaglp lalitfgram
      361 askktprewe yakevlrqsv asvfpgvgke mypklkfsyd cllderfrsc lycslypedy
      421 liekdelvdc wigeglldeh tnlsnarnqg hfiigslida cllekqgshr ikmhdvirdm
      481 alwiagesek ekffvksgiq lkeqpnakkw eevtrmslme nqtenlteil ecpnlqtlfl
      541 grnrlrviin dffnfmpmlr vldlsrnrnl eelpvgiakl vslehlnlsw igikklpvel
      601 kalaklkyln lektrklsmi pqqlissfsk lqvlkmegcg ygcllvleem c
//
LOCUS       XP_016720703             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720703
VERSION     XP_016720703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865214.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016720703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..127
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14474
     CDS             1..127
                     /gene="LOC107933063"
                     /coded_by="XM_016865214.2:89..472"
                     /db_xref="GeneID:107933063"
ORIGIN      
        1 mgaseddeya rimsrleele keelsaedne enlededede danalesdgn edeltkaaeg
       61 ngdedeltka afhrkkdecy shldhgqrys esqsrkqlqq fngkepiekm snkykhqdlt
      121 npfavsd
//
LOCUS       XP_040943754             881 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At5g63020 [Gossypium hirsutum].
ACCESSION   XP_040943754
VERSION     XP_040943754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087820.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..881
                     /product="probable disease resistance protein At5g63020"
                     /calculated_mol_wt=100813
     Region          159..400
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          515..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <525..>716
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          537..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          561..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          585..607
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          633..657
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          658..709
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          710..739
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          740..762
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..881
                     /gene="LOC107933062"
                     /coded_by="XM_041087820.1:1..2646"
                     /db_xref="GeneID:107933062"
ORIGIN      
        1 mgnifstsls ldtiitrcwd caagqasylc nlednlhalq aevaklkelr gdlmsrvria
       61 edeqqhkrln qvegwlqrad hviadadqls respqqvekl cigsccsrhp rsthkfgkqi
      121 arilqevkhl kengdfsdva ckpplpsatk rpseptvgle syvnqvwssl qkeqvgvigi
      181 yglggvgktt llnqinnkfh dtthdyrviw avasqdrpie rvqdqiakri glsnegwksi
      241 eekdddifkv lwkkkfalll ddiwewfdlt ragvplptqg ngskvifttr rldvccqmqp
      301 nmdnnikvec lppgeafelf eekvgsetlr mhpdicklae avvdecgglp lalitigram
      361 askktppewe yaievlrqsa asvlpgvgke mypklkfsyd clpderfrsc flycslyped
      421 yliekdelvh cwiregllde htnlsnarnq ghfiigslid acllekrqns vsvkmhdvir
      481 dmalwiages ekekffvksg vqlkeqpkak kweevtrmsl mdnqienlte ilecpnlqtl
      541 flrrnrlkvi mddffnfmpm lrvldlsrnm nleelpvgia klvslehlnl srtgikklpv
      601 elkalarlky lnlewtadle mipqqlissf sklqvlkleg cgygcllvle emehlkylnv
      661 ltlsfrrase lekalrfnkf fscaieqvsl ldfrdsrsln imalaklqhl ctlrlwscmd
      721 leevkierni iegagcfhsl ryvivdecnh lrdvswvtfa phleelwiae cnglkeiise
      781 eklgevaelk gnlnlfskle ililnrlpkl ktiyhhalpf phlkkvyiig cpmlkklpln
      841 snsakghrhi iegeegwwkd vewedestki aflptfkphi l
//
LOCUS       XP_016720718             116 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid-transfer protein 13 [Gossypium hirsutum].
ACCESSION   XP_016720718
VERSION     XP_016720718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865229.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..116
                     /product="non-specific lipid-transfer protein 13"
                     /calculated_mol_wt=12711
     Region          25..113
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cl07890"
                     /db_xref="CDD:447555"
     CDS             1..116
                     /gene="LOC107933081"
                     /coded_by="XM_016865229.2:1..351"
                     /db_xref="GeneID:107933081"
ORIGIN      
        1 msllfacitv lfsiigsavg qssydcseva dnfipcvtyl velesrpanq ccsglqvlnq
       61 makindkgpr nicqciedla ytmnapyvas riqslsrech ihfsfpisia mdchri
//
LOCUS       XP_016720699             133 aa            linear   PLN 06-AUG-2024
DEFINITION  perakine reductase-like [Gossypium hirsutum].
ACCESSION   XP_016720699
VERSION     XP_016720699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865210.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..133
                     /product="perakine reductase-like"
                     /calculated_mol_wt=14822
     Region          <1..99
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     CDS             1..133
                     /gene="LOC107933059"
                     /coded_by="XM_016865210.1:1..402"
                     /db_xref="GeneID:107933059"
ORIGIN      
        1 meelkklvee gkikyialse asavtikrah anhpitalqm eelgigivay splghdffdr
       61 kaiveslpdg ksrylvfkni kdnvgslalk ltqedlkeir davpiddvsg trevasyawk
      121 fadtpikemw fce
//
LOCUS       XP_016720698             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016720698
VERSION     XP_016720698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865209.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..177
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20817
     Region          40..72
                     /region_name="SWIM"
                     /note="SWIM zinc finger; pfam04434"
                     /db_xref="CDD:309540"
     CDS             1..177
                     /gene="LOC107933058"
                     /coded_by="XM_016865209.1:1..534"
                     /db_xref="GeneID:107933058"
ORIGIN      
        1 mvanrrlars mnveihsrrl etflvietis rrpgiptrsy gvdlrnrrce crrfetlhyp
       61 cehvvaacak vnvnveqyvd dvytlerklr vwknefpvlp dlstwevppt tfelildrrl
      121 rrnlrgrpqs srirnemdir eksdskcrgl crlsghsqnk cpyrnfhfgq ssesgrn
//
LOCUS       XP_016724254             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724254
VERSION     XP_016724254.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868765.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..197
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22467
     Region          <2..164
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..197
                     /gene="LOC107936104"
                     /coded_by="XM_016868765.1:1..594"
                     /db_xref="GeneID:107936104"
ORIGIN      
        1 mnvlrgigvp esniltllnr qprlllydpv rlkeiveevk rmgigssrmk flvavqafrs
       61 mskstlekki dvyrrwgwsd qeineafgry plcmtvseek tmaimdflvn kmgysstlia
      121 kepclvtrsl ekriipravf arelisqglv nefklstlfe tseklefvng sslvfvavfl
      181 fplmklklnv lldllli
//
LOCUS       XP_040943756             329 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF15, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040943756
VERSION     XP_040943756.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087822.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..329
                     /product="transcription termination factor MTERF15,
                     mitochondrial"
                     /calculated_mol_wt=38143
     Region          21..294
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..329
                     /gene="LOC121214082"
                     /coded_by="XM_041087822.1:1..990"
                     /db_xref="GeneID:121214082"
ORIGIN      
        1 masrvsnyvh fetpekpdsl iaflenhgfs ntqivnlikr qpllllfdae kslspklefl
       61 ysigfsrpel akllsnyprl lasslekqii psfdllrnlf qshdktikai krytgiiayd
      121 pesylypnmn vlrgigvpes niltllncqp rsllfnpvrl keiveevkrm gidssrkkfl
      181 vavyafrsms kstlenkidv yrrwgwsdqe ineafrrypm cmtvsedkim stmdflvnkm
      241 gysltriakq psfltrslek rimpralfar elisqglvne fklsvlfdts ekvfirmyid
      301 rfvnkapell klykeklkis gkkhrseva
//
LOCUS       XP_016724273             369 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF6,
            chloroplastic/mitochondrial-like [Gossypium hirsutum].
ACCESSION   XP_016724273
VERSION     XP_016724273.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868784.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724273.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..369
                     /product="transcription termination factor MTERF6,
                     chloroplastic/mitochondrial-like"
                     /calculated_mol_wt=42418
     Region          67..338
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..369
                     /gene="LOC107936119"
                     /coded_by="XM_016868784.2:1..1110"
                     /db_xref="GeneID:107936119"
ORIGIN      
        1 maasqsfnls iikistilrf isissnghsc tvsylinkcg fstelasras syvhfetpek
       61 pdslfvflen hgfsktqiln likkgprllv cdtektllpk ieylhslgfs rpklakilss
      121 ypsllirslk nqiipnfnll rnlfhsddka ikvikrytpi lvydlesyly pnmnvlrgig
      181 vpesnilvll nrqprsllyn pvrlkeivee aermgfdpst kmflsvvial ksmtkstlek
      241 kfdvyrrwgw sdqeiheafr rhplcmtvse dkvmaimdfl vkkmgysstl iakqpsilwk
      301 sfrknivpra lfarellsqg lvndlklsvl fdtsekvfir mfvdrfvnka pdllklykek
      361 lkiseknkh
//
LOCUS       XP_016724252             373 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF6,
            chloroplastic/mitochondrial-like [Gossypium hirsutum].
ACCESSION   XP_016724252
VERSION     XP_016724252.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868763.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724252.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="transcription termination factor MTERF6,
                     chloroplastic/mitochondrial-like"
                     /calculated_mol_wt=42983
     Region          67..338
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..373
                     /gene="LOC107936103"
                     /coded_by="XM_016868763.2:1..1122"
                     /db_xref="GeneID:107936103"
ORIGIN      
        1 maasqsfkfs nikistslrf isissnghsf tvsylinkcg fstelaswas syvhfetpek
       61 pdslfvflen hgfsrtqiln likkrprllv cdtektllpk ieylhslgfs rpelakilss
      121 yptllmhslk nqiipnfnll rnlfhsddka ikaikrftpi lvydlesyly pnmnvlrgig
      181 vpesnilvll nrqprsllyn pvrlkeivee aermgfdpst kmflsvvial ksmtkstlek
      241 kfdvyrrwgw sdqeihealr rhplcmtvse dkvmaimdfl vkkmgysstl iakqpsilrk
      301 sfrkniipra lfarellsqg lvndlklsvl fdtsekvfir mfvdrfvnka pellklykek
      361 lkisekkqtl evs
//
LOCUS       XP_016724264             146 aa            linear   PLN 06-AUG-2024
DEFINITION  putative invertase inhibitor [Gossypium hirsutum].
ACCESSION   XP_016724264
VERSION     XP_016724264.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868775.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724264.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..146
                     /product="putative invertase inhibitor"
                     /calculated_mol_wt=15840
     Region          3..145
                     /region_name="CIF_like"
                     /note="Cell-wall inhibitor of beta fructosidase and
                     similar proteins; cd15796"
                     /db_xref="CDD:275440"
     Site            order(75..76,79,83,87,90,95..96,98..99,110,113)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:275440"
     CDS             1..146
                     /gene="LOC107936113"
                     /coded_by="XM_016868775.2:1..441"
                     /db_xref="GeneID:107936113"
ORIGIN      
        1 mylieqtcrq sgffalcdst lrsdprssna nleglakisv eividkanat lnfivdlfkn
       61 vsdpvlyrsy gtcidsygas vqrllpeaia algskeyats rhdvatvatn vnacdeqfse
      121 ktpfsdrnrl vhdlslmsag iiellg
//
LOCUS       XP_040943759             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943759
VERSION     XP_040943759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087825.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..132
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14446
     CDS             1..132
                     /gene="LOC121214083"
                     /coded_by="XM_041087825.1:1..399"
                     /db_xref="GeneID:121214083"
ORIGIN      
        1 mglwqssriw vfykeerlkp hgkyikkark kqgaavfsem gfggkkkrre regrplgvvq
       61 spasfsrrps crpscrrcsg hrtrwpevqk agfaeqvgmg gggrclgggs rrhdrgggcg
      121 asgalgfqrl kp
//
LOCUS       XP_040943760             441 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 6 [Gossypium hirsutum].
ACCESSION   XP_040943760
VERSION     XP_040943760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087826.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..441
                     /product="sodium/hydrogen exchanger 6"
                     /calculated_mol_wt=48707
     Region          11..>365
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..441
                     /gene="LOC107944844"
                     /coded_by="XM_041087826.1:1..1326"
                     /db_xref="GeneID:107944844"
ORIGIN      
        1 miyyalhsss fawlislliv tsfcpllqkp ffsnfgaivt failgtfias vvtgvlvylg
       61 grmylmyglp fveclmfgal isatdpvtvl sifqelgtdt nlyalvfges vlndamaisl
      121 yrtmsivrkh assaqnffmv ifrfletfvg smsagvgvgf vsallfkyag ldvdnlqnle
      181 cclfvlfpyf symlaeglgl sgivsilfta ivmkhysysn lsensqqfvs dffhlissla
      241 etftfiymgf diamekhsws hlgfiffsil fivvaraanv fscaylvnlv rpvhrqiplk
      301 hqkalwysgl rgamafalal qsvhdlpegr gqiiftatta ivvlsvllig gstgtmleal
      361 hvvgdshdgh lgesfdvnng yvapsfkkdg tsgngikmkl kefhkrtssf taldrnyltp
      421 fftsqnedde eeeeallder i
//
LOCUS       XP_040943761            1681 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943761
VERSION     XP_040943761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087827.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1681
                     /product="uncharacterized protein"
                     /calculated_mol_wt=189525
     Site            order(32..33,35,38,65,75..76,110,112,121,123,125,127..135,
                     138..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..320
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          337..426
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(367,369,383)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          518..790
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(518..522,526,538,540,569,585..588,592,594,637,639,
                     641..642,644,655,658,676..679)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(518..522,526,538,540,569,585..588,592,637,639,
                     641..642,644,655)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(522,592,594,637,639,641,658,676..679)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(654..661,672..679)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Site            order(885..886,888,891,918,928..929,963,965,973,976,978,
                     980..987,991..1005)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(910,913,915,917,919,947,949,951,953,955,980,982,984,
                     986,991)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          926..1031
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          1063..1174
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          1191..1280
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(1221,1223,1237)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          1371..1640
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(1371..1375,1379,1391,1393,1422,1438..1441,1445,1447,
                     1490,1492,1494..1495,1497,1508,1511,1529..1532)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(1371..1375,1379,1391,1393,1422,1438..1441,1445,1490,
                     1492,1494..1495,1497,1508)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(1375,1445,1447,1490,1492,1494,1511,1529..1532)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(1507..1514,1525..1532)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1681
                     /gene="LOC107943336"
                     /coded_by="XM_041087827.1:16..5061"
                     /db_xref="GeneID:107943336"
ORIGIN      
        1 mgktiscsvl lsliscfyll fataldtitp sksikdpefi isqngifrlg ffslanssnr
       61 yvgilyhqip vqtvvwvanr nrplkdssgi lnisddgnli vlngkteilw ssnvtntapn
      121 attaqlsnlg nlvlsngdda gsslwesfqh pcnvflqtmk igvdiktgrk velkswksid
      181 dpsdgnfslg fepfnipelv irkynqlyfr tgpwngnifi giiymytvnf dgfdvvadnp
      241 qqpyyityey sndfrliyye ldtqgkfier rwdaekgnwi nrypshetdc dvygicgafg
      301 icdsskrpic sclkgfkprn aeewsrgnws sgcfrntplq cqrdnnngsg agqgddefle
      361 mqmmkvptfp yrssivngdc knecmkncsc vayayddgig cmlwsgdlid vkklsslgvd
      421 lyirlsssel dkgksrkviv ittviagivv itisavlflw crmakhkgrn kkqkqvkhqi
      481 crenigensi gvklqqlpif nfeelatatn nfnhaeklgq ggfgqvyrgt ldggkeiavk
      541 rlskssvqgl eefmnemvvi sklqhrnlvr llgccvegee kmlayeympn ksldaflfdp
      601 akqdvldwrk rfniiegisr gllylhrdsr lkiihrdlka snilldeeln pkisdfgmar
      661 ifggnqnqak tkrvvgtygy mspeyvmrgq fseksdvfsf gvllleivsg rrntsfcndq
      721 yalsllgyaw klwregdird ivdkvilese tyskneneke iwrcihvgll cvqefakdrp
      781 tmptvvsmln seisdlntpk qpafteaplm shdvedkvsl ndvtltnldg rllisfinhr
      841 itskfctsyt vmgktiscsv lvaliscfyl qlqfgtasht itasksikdp dviisqngvf
      901 rlgffslpns snryvgilyh qiplqtvvwv anrnrplkgf sgiltisgdg nlvvsngkae
      961 ilwstnvtnl vpnattaqll dsgnlvlnng enggssilwe sfqhpsnvfl qtmkistdvk
     1021 tgrkvqtrsw kspddpsdgn ffqgiepfsi pegviwnnnq iyfrtgpwng riyiglihvn
     1081 svyfdgfyvv addvektyye tyeystdsrl iyyelesegr fveriwdagk gewingyssy
     1141 ltdcdfygkc gafgicdstk rpicsclkgf kprnieewsr gnwssgcfrt tplhcqrydn
     1201 ngseagqgdd gflklkkvkv pafpdqssit ngeckdqcmk ncscvayayd agigcmlwsg
     1261 dlidvqkfsn rgvdlyirlp sseldkgnse iivittvisg mvviiiisal fllrrmgqqr
     1321 gsnkrraqik gkfhsenmge ssigvklqql plfnfeelat atnnfhpqkk lgqggfgsvy
     1381 kgtlddgkei avkrlskasg qgleefmnev vvisklqhrn lvklfgccve aeekmlvyef
     1441 mpnksldsfl fdpvkqklld wrkrfniieg isrgllylhr dsrlkiihrd lkasnvlldq
     1501 elnpkisdfg iarifrgden qantkrvvgt ygymspeyvm hgrfseksdv fsygvlllei
     1561 vsgrrnksfy nkddlsllgy vwklwnegni wdlvdkvisk sesdlknkke iwrcihvgll
     1621 cvqeyakdrp tmstivsmln seisdlntpk qpaftqalli sndfedcvsf ndvtltgfdg
     1681 r
//
LOCUS       XP_040943762             452 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040943762
VERSION     XP_040943762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087828.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..452
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=50127
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..134,
                     138..152)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,138)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..176
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          <192..280
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          309..385
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(327,329,343)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     CDS             1..452
                     /gene="LOC121214084"
                     /coded_by="XM_041087828.1:1..1359"
                     /db_xref="GeneID:121214084"
ORIGIN      
        1 mrntiscsvl laliscfyll fatashtita sksikdpdvi isqngvfrlg ffslanssnr
       61 yvgilyhqip lqtvvwvanr nrppkdfsgi ltisddgnlv vsngkaeilw stnvtnlvpn
      121 attaqlldsg nlvlnngeng gssilwesfq hpsnvflqtm kistdvktgr ktrswkspdd
      181 psdgnffqgi epfsipeddv ektyyetyey stdsrliyfe lesegrfver iwdagkgdwi
      241 ngyssyltdc dvygkcgafg icdstkrpic sclkgfkprn ieewnrgnws sgcfrttclh
      301 cqrdnnngce agqgddgflk lkkmkvpafp dqssitngec kdqcmkncsc vayaydagig
      361 cmlwsgdlid vqkfsnrgvd lyirltssel dkwnceiivv ttvisgmvvi iiisalfllr
      421 rmgqqrgess kvvfvittvt vgnyaafnsl ll
//
LOCUS       XP_040943763             250 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040943763
VERSION     XP_040943763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087829.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..250
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=28374
     Region          34..>231
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(34..37,40,42,54,56,85,101..104,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..250
                     /gene="LOC121214085"
                     /coded_by="XM_041087829.1:245..997"
                     /db_xref="GeneID:121214085"
ORIGIN      
        1 mgessigvkl qqlplfnfee latatnnfhp qkklgqggfg pvykgtlddg keiavkrlsk
       61 asgqgleefm nevavisklq hrnlvklfgc cveaeekmlv yefmpnksld aflfdpikqk
      121 lldwrkrfni iegisrglly lhrdsrlkii hrdlkasnvl ldqelnpkis dfgiarifgg
      181 denqantkrv vgtygymspe yamhgrfsek sdvfnygvll leivsgrrnt sfynkddlsl
      241 lgyhyskiyf
//
LOCUS       XP_040943764             486 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            SD1-13 [Gossypium hirsutum].
ACCESSION   XP_040943764
VERSION     XP_040943764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087830.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..486
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD1-13"
                     /calculated_mol_wt=54179
     Site            order(32..33,35,38,60,69..70,91,93,101,104,106,108..115,
                     119..133)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,61,75,77,79,81,83,108,110,112,114,119)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          71..159
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          191..279
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          295..369
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(310,312,326)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          <391..445
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..486
                     /gene="LOC121214086"
                     /coded_by="XM_041087830.1:1..1461"
                     /db_xref="GeneID:121214086"
ORIGIN      
        1 mgktiscsvl laliscfyll fataldtitp sksikdpdvi isqngvfrag ffslanssnr
       61 ykqaserhfw iltisddgnl vvsngkaeil wstnvtnlvp natsaqllds gnlvlnngen
      121 ggssilwesf qhpsnvflqt mkistdvktg rkvqtrswks pddpsdgnff qgiepfsipe
      181 gviwnnnqiy frtgpwngri yivlinvnrv yfdgfyvvad dsdgryveri wdagkgdwin
      241 gyssyltdcd vygkcgafgi cdstkrpics clkgfkprni eewsreittt eseagqgddg
      301 ffklkkmkvp afpdqssitn geckdqcmkn cscvayayda gigcmlwsgd lidvqkfsnr
      361 gvdlyirlps seldkgnsei ivittvwnlw negniwdlvd kvisksesdl knkkeiwrci
      421 hvgllcvqey akdrptmsti vlmlnseisd lntpkqpaft qallinddfe ncvsfidvtl
      481 tgfdgr
//
LOCUS       XP_016732570             393 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_016732570
VERSION     XP_016732570.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877081.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732570.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 58% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..393
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=43699
     Region          <59..138
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Site            order(70,72,82,84,86,88..96,99..112)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Region          170..280
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          297..385
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(327,329,343)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     CDS             1..393
                     /gene="LOC107943334"
                     /coded_by="XM_016877081.2:1..1182"
                     /db_xref="GeneID:107943334"
ORIGIN      
        1 mgktiscsvl lsliscfyll fataldtitp sksikdpefi isqnetglsk tllgfstylv
       61 vlngkteilw ssknvtntap nvttahlsdl gnlvlsngdd egsslwqsfq hpsnafiesm
      121 eistdvkkgr kveikswksh ddpsdgnfsf giepfnipef viwnnnqlyf rsgpwngnmf
      181 iglilptvaf swfsvvadnr qqtffigyed snhsmltyce ldsqgkfser rwdaekgnwi
      241 ksysinhtdc dvygkcgefg msnstkrpic sclkgfkprn aeewsrgnws sgcfrttplq
      301 cqrdnnngsg agqsddgfle mkmmnvpafp drssivngec kdqclkncsc vayaydssig
      361 cmmwsgdlid vkessrgvdl yirlpaselg kfs
//
LOCUS       XP_040943765             373 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040943765
VERSION     XP_040943765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087831.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..373
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=42444
     Region          61..333
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(61..65,69,81,83,112,128..131,135,137,180,182,
                     184..185,187,198,201,219..222)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(61..65,69,81,83,112,128..131,135,180,182,184..185,
                     187,198)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(65,135,137,180,182,184,201,219..222)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(197..204,215..222)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..373
                     /gene="LOC121214087"
                     /coded_by="XM_041087831.1:1..1122"
                     /db_xref="GeneID:121214087"
ORIGIN      
        1 mevnqakemm grnkrrtqik dkfhgenige ssigvklqql plfnfeelat atnnfhpqek
       61 lgqggfgpvy kgtlddgkei avkrlskasg qgleefmnev vvisklqhrn lvklfgccve
      121 aeekmlvyef mpnksldsfl fdpvkqklld wrkrfniieg isrgllylhr dsrlkiihrd
      181 lkasnvlldq klnpkisdfg iarifggden qantkrvvgt ygymspeyam hgrfseksdv
      241 fsygvlllei vggrrntsfy nkddvsllgy awklwregdi cgivdkvile setysrngne
      301 keiwrcihlg llcvqefakd rptmptiasm lnneisdpnt pkqpafiear lmshdvedrv
      361 llddvtltnl dsr
//
LOCUS       XP_040943766            1720 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943766
VERSION     XP_040943766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087832.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 48% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1720
                     /product="LOW QUALITY PROTEIN: uncharacterized protein"
                     /calculated_mol_wt=193272
     Region          <4..115
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <262..316
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cl24013"
                     /db_xref="CDD:474126"
     Region          348..>419
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          447..521
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(477,479,493)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          560..>718
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(560..563,566,568,580,582,611,626..629,678,682..683,
                     685,695..696)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          723..>789
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cl24013"
                     /db_xref="CDD:474126"
     Region          <766..819
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cl24013"
                     /db_xref="CDD:474126"
     Region          851..962
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          979..1069
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(1010,1012,1026)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          1160..1430
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(1160..1164,1168,1180,1182,1211,1227..1230,1234,1236,
                     1279,1281,1283..1284,1286,1297,1300,1318..1321)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(1160..1164,1168,1180,1182,1211,1227..1230,1234,1279,
                     1281,1283..1284,1286,1297)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(1164,1234,1236,1279,1281,1283,1300,1318..1321)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(1296..1303,1314..1321)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     Site            order(1472..1473,1475,1478,1505,1515..1516,1541..1549,
                     1552..1565)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(1497,1500,1502,1504,1506,1534,1536,1538,1541,1543,
                     1545,1547,1549)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          1513..1591
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          <1599..1657
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     CDS             1..1720
                     /gene="LOC107944273"
                     /coded_by="XM_041087832.1:1..5163"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:107944273"
ORIGIN      
        1 msmvsgymsp eyamqgqfse ksdvfsygvl lleivsgrrn tsfynnkddl nllgyawrlw
       61 regniwrlvd evifelesds nnekeiwrci hvgllcvqey tkdrptistv ismlnseisd
      121 lntpkqpaft qaplmshnve drgslndvts kywgeitgkt inravllali scfyllfata
      181 lntitpsksi kdpdviisqn gvfrlgffsl anssnryvgq ietglsktll gfspyqmmai
      241 llfpmeklkf fghrmlpiqf livqllasgn lvlsngddga sslwesfedp snafietmki
      301 stdvkkgrkv elkswksidd psdgnfslgf epfnipegii rkknqlyfrt gpwngytfig
      361 linmytsylq gfvvvadnpq qpycmthefy tdsiliygel dsqgkfierr wdagkgnwin
      421 nclkrfkprn ieewsrgnws sgcfrttplq cqrdnnngsg agqgddgfle mknmkvpvfr
      481 hpssvsngec kdqcmkncsc vtyayddgig cmlwsgdlid isplaesift fvchlrnslp
      541 linfkelata tnnfnhakkl gqggfgpvyk gtlhaekeia vkrfskasgk gleefmnevg
      601 vtsklqhrnl vrllgccvee enmlvyeymp nksldvflfd pakqdvldwr krfniikgik
      661 qgllylhrys rlriihrdlk vnnilldeel npkildfgma rxfggsenxa ntkrvvgnti
      721 tpsksikdpd viisqngvfr lgffslanss nryvgilynq ipvqtvllds gnlvlnngdn
      781 ggssslwesf qhpsnvflqt mkmgvdvktg rkvhtrpwkg pddpsdgnfs qglepfnnpe
      841 gvirnnnqiy frtgpwnghi yiglihmnsv yldglyvvad degksyyetf eysnksmlty
      901 yelnyegrfv qrnwdagkgd winschmlqn dcdfygkcga fgicdptkqp icscskgfkp
      961 rnaeewsrgn wssgcfrtta lqcqrdnnng sggagqsddg flklktmkap afpdqssiin
     1021 geckdqcmkn cscvayayda gigcmfwsad lidvqkfptr gvdlyirlss seldkgkssk
     1081 vivittvtag ivvitisalf lwcgmakqrg tnkrhkqikh ksysenvges sigvklqqlp
     1141 lfnfqelata tnnfhpekkl gqggfgpvyk gtledgkeia vkrlskasgq gleefmnevv
     1201 visklqhrnl vrlfgccvea eekilvyelm pnkslnaflf dpvkqrlldw rkrfniiegi
     1261 srgllylhrd srlriihrdl kasnvlldqd lnpkisdfgm arifggdenq antkrvvgty
     1321 gymspeyamq gqfseksdvf sfgvllleiv sgrrntsfyn nkddlsllgy awklwregni
     1381 wglvdevile sksdsnneke iwrcihvgll cvqeytkdrp tistvismln seisdlntpk
     1441 qpaftqaplm shnvenrgsl ndvtskhitp sksikdpdvi isqngvfrlg ffslanssnr
     1501 yvgilynqip vqtvvwvadr nrplkdssgi ltisddgnll ldsgnlvlsn gddgasslwe
     1561 sfeypfnafi etmkistdvk kgrkvelksw ksiddpsdds qgnfierrwd ngkgnwinky
     1621 ssyqtdcdvy gycgafgicd sskqpicscl krfkprniee wsrgnwssgc frttplhcqr
     1681 dnnngsgagq dddgfldmkn mkvpasphps svtasakisa
//
LOCUS       XP_040943768             473 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330 [Gossypium hirsutum].
ACCESSION   XP_040943768
VERSION     XP_040943768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087834.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..473
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
                     /calculated_mol_wt=52464
     Site            order(32..33,35,38,65,75..76,110,112,120,123,125,127..136,
                     139..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,127,129,131,133,135)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..177
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          209..318
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          335..424
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(365,367,381)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     CDS             1..473
                     /gene="LOC121214088"
                     /coded_by="XM_041087834.1:14..1435"
                     /db_xref="GeneID:121214088"
ORIGIN      
        1 mgktiscsvl laliscfyll fataldiitp sksikdpdvi isqngvfrlg ffslanstnr
       61 yvgilynqip vqtvvwvanr nrplkdssgi lnisddgnlv vsngkaevlw sshvnntapn
      121 attaqlldsg nlvlsngedg asslwesfed psnafietmk istdvktgrk velkswksid
      181 dpsdgnfsfg iepfnirelv irnnnqlyfr sgpwngnifi gllymytdnl dgfevftdks
      241 pyymtyessn esmliyyeld sqgkfverew dagkgdwskn yptiqtdcdv ygkcgafgic
      301 dsmkrticsc lkgfeprnie ewsrgnwssg cfrttplqcq rdnnngsgag qgddgflemk
      361 mmkvpafpar ssiingeckd qcmkncscma yaydsgigcm mwsgdlidvq kfstggvdly
      421 irmpsseldk gksskiivit tviagivvvi tisalflwrr makhkgniym dni
//
LOCUS       XP_040943769             363 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            SD1-13 [Gossypium hirsutum].
ACCESSION   XP_040943769
VERSION     XP_040943769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087835.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..363
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase SD1-13"
                     /calculated_mol_wt=41447
     Region          52..322
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,128,171,173,
                     175..176,178,189,192,210..213)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(52..56,60,72,74,103,119..122,126,171,173,175..176,
                     178,189)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(56,126,128,171,173,175,192,210..213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(188..195,206..213)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..363
                     /gene="LOC107941312"
                     /coded_by="XM_041087835.1:1..1092"
                     /db_xref="GeneID:107941312"
ORIGIN      
        1 mrrnkkrkqi khqfcsenke ensigvklqq lpvinfeela tatnnfnhak klgqggfgpv
       61 yrgtlddgne iavkrlskts gqglkefmne vvvisklqhr nlvrllgccv egeekilvye
      121 ympnksldtf lfdpakqdvl dwrkrfniie gisrgllylh rdsrpkiihr dlktsnilld
      181 kelnpkisdf glakifggde nqantkrvvg tygymppeyv mqgqfseksd vfsfgvllle
      241 vvsgrrstsf ynnqyelsll gyawklwreg diwgivdkvi lesesyskne teiwrcihvg
      301 llcvqefakd rptmptvvsm lnseisnlnt pkqpaftqtp litqdvedrf slnyvtvtdf
      361 ggr
//
LOCUS       XP_040943770             817 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g11330, partial [Gossypium hirsutum].
ACCESSION   XP_040943770
VERSION     XP_040943770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087836.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         <1..817
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g11330"
     Site            order(12..13,15,18,45,55..56,90,92,100,103,105,107..116,
                     119..131)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(37,40,42,44,46,74,76,78,80,82,107,109,111,113,115)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          53..157
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          189..299
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          316..406
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(347,349,363)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          506..777
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(506..510,514,526,528,557,573..576,580,582,625,627,
                     629..630,632,643,646,664..667)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(506..510,514,526,528,557,573..576,580,625,627,
                     629..630,632,643)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(510,580,582,625,627,629,646,664..667)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(642..649,660..667)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..817
                     /gene="LOC107941305"
                     /coded_by="XM_041087836.1:<1..2454"
                     /db_xref="GeneID:107941305"
ORIGIN      
        1 fgtaldtitp sksikdpefi isqsgvfrlg ffsfanssnr yvgilyhqip vqtvvwvanr
       61 nkplkdssgi lnisddgnlv vfngkaeilw ssnitnlvpn attsqlldsg nlvlsngedg
      121 asslwesfed psnafletmk isndvkkgrk veikswkspd dpsdgnfsig iepfnipegv
      181 irnnnklyfr tgpwngntfi gvimktvyid gfyivadnqq qtyyityefs dnsrlryyel
      241 dsqgkfferk wdagkgdwin rysasqtess vygqcgafgi cdltkqpics clkgfkprni
      301 eewsrgnwss gcfrttplqc qrdknngsea gqgdndgflk lktmkvpvfp nrssinngec
      361 kdqcmkncsc vayaydagig cmfwsgdlid mqkfsthgvd lyirlpssel dkgkstkviv
      421 itavivgivt itiimlflwc wmakrrgrkp khkqiklqln kgnamtkfss envvenpigv
      481 klqqlrlfnf delatatsnf dhakklgqgg fgpvyrgtlg dekeiavkrl skasgqglee
      541 fmnevevisr lqhrnlvkll gccveaeekm lvyeympnks ldafvfdpik qnvldwskrf
      601 kiiegisrgl lylhrdsrlk iihrdlkpsn vlldqelnpk isdfgmarif ggdenqantk
      661 rvvgtygyms peyaiqgrfs eksdvfsfgv llleivsgrk ntsffnnpdy fslleyvwkl
      721 wnegniwslv dkvvlepksn skkekeikrc ihigllcvqe yandrptmsv vvsmlnneip
      781 nfktpkqpaf tqtplithnv qnraslndvt ltdfdgr
//
LOCUS       XP_040943771             683 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PAT1 homolog [Gossypium hirsutum].
ACCESSION   XP_040943771
VERSION     XP_040943771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087837.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..683
                     /product="protein PAT1 homolog"
                     /calculated_mol_wt=76601
     CDS             1..683
                     /gene="LOC121214089"
                     /coded_by="XM_041087837.1:1..2052"
                     /db_xref="GeneID:121214089"
ORIGIN      
        1 mrkilhhhse gtnyadqhtn idiyhyvveg ssaaewthge efphwldqqp letesipddk
       61 rwssqplanl dakhlyrtss ypeqqqqlqq qqqyhqhfss epilvpkssy isypppdgrs
      121 pqaspnqhsg hlnipymagg pqmasspnls glpnsqlqlp glhhgpnyrg nmpqfapgls
      181 vssqpsskwg sqpklygdns svlnnmlqqq ltrqnglipp qlmpqlqshq qrlqhpvqps
      241 fshfsgiqsq qfnphlspsp pvmnkveail gigdlrdqra ksaqkgrqsl rgfdsgalks
      301 dcgwpqftsk ymstdeiegi lrmqlvaths ndpyvddyyh qdclgrksar aklrhhfcpt
      361 hlrdlpprar antephaflq vdalgrlpfs sicrprplle vdppnssavt nndqkasdip
      421 leeepmlaar vtiedglcll dvddidrflq fnqlqdggaq mrqrrqvlle glgallqlvd
      481 plgksgntde laqkddlvfl rivslpkgrk llarflqllp pggermrivc msifrylrfl
      541 fgglpfdpge deitinlarv vsscvhrmdl ralgvclvga tklmtdssaa gnynttnlsl
      601 wkasfdeffn lltkycinky dtvmqslrmq akpnmaides dsakaikrem pvdllhaclp
      661 hlndqqkkql ldlsqrpmlv gqs
//
LOCUS       XP_040943772             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943772
VERSION     XP_040943772.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087838.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..168
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19571
     Region          <92..145
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..168
                     /gene="LOC107941318"
                     /coded_by="XM_041087838.1:1..507"
                     /db_xref="GeneID:107941318"
ORIGIN      
        1 milefgvsds gflfssrtql avhqdklkll lmrkckslsr qlgrsssyss lrsksaredl
       61 rhyiwdhirr rtrrnedgdn ddnddghqcy etiyvgstrk ryvvsskylk hplldalier
      121 skqkhggedh ilvkcevvlf dhllwmiens dpnlildsle eltdlyvf
//
LOCUS       XP_040943773             359 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor SR45 [Gossypium hirsutum].
ACCESSION   XP_040943773
VERSION     XP_040943773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087839.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..359
                     /product="serine/arginine-rich splicing factor SR45"
                     /calculated_mol_wt=39381
     Region          133..204
                     /region_name="RRM_RNPS1"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein with serine-rich domain 1 (RNPS1) and similar
                     proteins; cd12365"
                     /db_xref="CDD:409800"
     Site            order(139..143,145..146,149..150,153..154,165,169..170,
                     190..200)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409800"
     CDS             1..359
                     /gene="LOC107941314"
                     /coded_by="XM_041087839.1:48..1127"
                     /db_xref="GeneID:107941314"
ORIGIN      
        1 makptrgrrs psvsgsgsss rsrsrsrsrs rsysgsdsks ssrsrsvsrs rsaspsssrs
       61 rsrslsssps rsgssrsrsp pqrrrisvli dflvslqmlr eqkqvarsfp ppqskksspa
      121 prktspires lvlyvdslsr nvneghlrei fgnfgevvnv dlamdralnl prgfgyvefk
      181 tradaekall ymdgaqidgn vvrakftlpp rpkaspppkp ipsattkrda pksdnvnadt
      241 ekdgpkrpre pspqrkppps prrrspvgrr ggsprrppes prrrpdspvr rrgetpprrr
      301 paspargrsp lspprrlrsp artsprriva vqsegvlhpq gavhlpddlv alqegplqs
//
LOCUS       XP_040943775             430 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NARROW LEAF 1-like [Gossypium hirsutum].
ACCESSION   XP_040943775
VERSION     XP_040943775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087841.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..430
                     /product="protein NARROW LEAF 1-like"
                     /calculated_mol_wt=47688
     CDS             1..430
                     /gene="LOC121214090"
                     /coded_by="XM_041087841.1:1..1293"
                     /db_xref="GeneID:121214090"
ORIGIN      
        1 mapirlnmrg rcsgshhqrn rpldferpcc chphlpsfrf tdtsafcfgw tatsrlndaa
       61 eeranyfanl qkgvlpetlg glpkgqqqqh clelmtiraf hskilnaqsg trlvfrikkg
      121 kltsngfspi qclptalegp ggwwcdvelw sshisvrlsq tqgaamfens dhptkvairt
      181 mglwllekst gsrqvgfivc fsyldypiqn vipclqhlsc vylgmerath ssqmilvwhf
      241 crnepshvpn nsvylqkhls eqmafipfad dfdmstvtts vkgvgeigdv kvidlqfsig
      301 sligkhvmkv grssgltsgt vlayaleynd ekgicfltdf lvvgenqqsf dlegdsgsli
      361 imkgengekp rpigiiwggt anrgrlklkv gqppenwtsg vdlgrllnll eldiiiteeg
      421 lkglylskhf
//
LOCUS       XP_040943776             413 aa            linear   PLN 06-AUG-2024
DEFINITION  exopolygalacturonase [Gossypium hirsutum].
ACCESSION   XP_040943776
VERSION     XP_040943776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087842.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..413
                     /product="exopolygalacturonase"
                     /calculated_mol_wt=46068
     Region          <125..412
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..413
                     /gene="LOC107936161"
                     /coded_by="XM_041087842.1:1..1242"
                     /db_xref="GeneID:107936161"
ORIGIN      
        1 msttpmldrw iqlctdgavq vdsrttaaeg ilrhgngewi igynrflcec fldglaliqd
       61 rqyagvmiqm dniedfkfyn tfferlikll ialpmvfdtr kglkvfmeip kedlisssna
      121 kaktwlgfry vdnlimkggg tldgqgqsaw pfnqchknnn cqalpisvkf dfvtnsriks
      181 irsihsknah fsffgctnin isnvellapd yspntdgikm gsssnirisy skistgddci
      241 ailsdssnid isnvyggpgh gisigslgky tneknvngvs vrkctlngtd ngirikswes
      301 pisitasnfl fqdifmynvr npiiidqtyc phppcnrqta shvqirdvty rnifgtssse
      361 iavsmqcskk fpcknivmtd ikfghhgikk slksycsyvn grsfgrqypp pcf
//
LOCUS       XP_016724325             109 aa            linear   PLN 06-AUG-2024
DEFINITION  VQ motif-containing protein 1 [Gossypium hirsutum].
ACCESSION   XP_016724325
VERSION     XP_016724325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868836.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..109
                     /product="VQ motif-containing protein 1"
                     /calculated_mol_wt=12174
     Region          12..37
                     /region_name="VQ"
                     /note="VQ motif; pfam05678"
                     /db_xref="CDD:461711"
     CDS             1..109
                     /gene="LOC107936162"
                     /coded_by="XM_016868836.1:1..330"
                     /db_xref="GeneID:107936162"
ORIGIN      
        1 mengrqpmkv viintkyvqt datsfksvvq eltgrdskva tnpprlrsrf yeeqvkkkeq
       61 agvqtaagvg sstssrpgds ilmknlsfke lerllkempp gddlwwnmd
//
LOCUS       XP_040943777             706 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 15 [Gossypium hirsutum].
ACCESSION   XP_040943777
VERSION     XP_040943777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087843.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..706
                     /product="receptor-like protein 15"
                     /calculated_mol_wt=78998
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <52..136
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          73..97
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..>705
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          98..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          224..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          323..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          395..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..462
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          463..486
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          487..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          511..532
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          609..629
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          630..653
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          654..675
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..706
                     /gene="LOC121203293"
                     /coded_by="XM_041087843.1:414..2534"
                     /db_xref="GeneID:121203293"
ORIGIN      
        1 mkkngidvlt ctpycfgkkk cflrfpyllh lltclifall vdlitlgrme lldlssnyfn
       61 gsipqnlgkl sslkalylag nlfkgslpvp glcelrrlqv ldishnrleg tlpsclsnlt
      121 slkvldvhdn llsgsitpnl ipsqkflqfi disnnvfegs fsfssmfnls klevivlggt
      181 knklqidndn qagngiplfq lkvlqisncs mksaplflln qhrliwvdis hnklsgaips
      241 wllqnntdlk flnlrnnsft gkldpfpqhp lssmvhmdas ynhidghlpk dlgivlpnlq
      301 ylnlscnffk gdlpssvgam rklllldlsf nnlsgklpne lvknctvlgv lklnnnnfhg
      361 dffsthfnls nlralelgnn eftgglmtke fyakmrifdv snnkmtrkip ngidakvlll
      421 qnnyfegqip cegffnaqvv dishnflsgq ipscliskaf snvellnlrd nrlsgnipae
      481 isffpslrvl llgnnrfngl iprqlcqfrd isimdlsnnf fsgsipscls nvsfgnyfsy
      541 swgnlmfsyw nirhedgysd lyplvllydf tsfwdnvkle dqyvfnidfv tknnllsfkg
      601 nilnymsgld lscnnltgai prslgklfsi ralnlshnhl tghipvslsn lsqiesldfs
      661 ynnlsgrips elvdlnflav fsvahnnlsg ripdkgqfat fginsy
//
LOCUS       XP_040943778             256 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like serine/threonine-protein kinase At1g78530 [Gossypium
            hirsutum].
ACCESSION   XP_040943778
VERSION     XP_040943778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087844.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..256
                     /product="receptor-like serine/threonine-protein kinase
                     At1g78530"
                     /calculated_mol_wt=29250
     Region          78..>226
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(78..81,84,86,98,100,129,145..148,198,202..203,205,
                     215..216)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..256
                     /gene="LOC107928090"
                     /coded_by="XM_041087844.1:1..771"
                     /db_xref="GeneID:107928090"
ORIGIN      
        1 mandlgiafy iiicciffii sktilmilly krwkrkntiy ehdfsggkmv mfrspllqsl
       61 ssdvflentl klsnkdiiga ggygtvykvm inetmvfavk rlnrgttdrd kgfereleam
      121 adikhrnivt lhgyythphy nlliyelmpn gsldsflhgk smddkvldwp trskialgaa
      181 rgiaylhhdc iphiihrdik ssnilldqnm earvsdfgla tllepthypl slslfplhlt
      241 lskelsfpsr yqttmf
//
LOCUS       XP_016714688            1058 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At4g27220 [Gossypium hirsutum].
ACCESSION   XP_016714688
VERSION     XP_016714688.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859199.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714688.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1058
                     /product="probable disease resistance protein At4g27220"
                     /calculated_mol_wt=120442
     Region          150..383
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <475..726
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          515..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          540..562
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          563..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..608
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          609..632
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1058
                     /gene="LOC107928045"
                     /coded_by="XM_016859199.2:1..3177"
                     /db_xref="GeneID:107928045"
ORIGIN      
        1 melvlpicea lkcfghltct yvehhrkler rmndllakqr qlnaiksdve mkiktelrlg
       61 rcvrqevenw lldvqtingk iqnidertqn lscfsrghlg kqvsltveev keiieqgrft
      121 galviddpst agvpfqlehl egetaviadi wkhlmsdeig mvgvcgmggi gkttimkhiy
      181 nqlleetksk plfekiiwvt vsqdfnitrl qqdiadamni edlpkpeqkr aavlrnelrq
      241 irhvlilddv wegfvlekvg ipipifsngs rlvltsrsnv vcgfigcsei vevpplsnee
      301 smnlflahtg rgilkvpsle eilgdivgec dglplaiavi agsmkgiydv vewrnaltel
      361 sdhvtsvkgt dkeiygrlkf sfdrledsni qncflycsly pedyliprve lieywidegf
      421 lergsrqqlh drghtilnrl vnncllekag ddvkmhdvmr dmalyikhpy fmvkagtglk
      481 elpgkqewkd vervsfmmnm vseippslsp nceklstlll qnnesleris esffqhmhsl
      541 sildlsytsi eqlpnsvsnl emlnalvlrg ckelryvpsl eklkalrkld lrgtgiekvp
      601 kglemlanlt ylnlcteslk elpiailprl sclqclvlyv klpnvkmngl eaarlrklev
      661 fegrfnelid fnayiksiqg reltsyllvm aspkakfddr plveglnnaf ffnfellgdc
      721 dvrnvfkiva ghqgvktvsl twgekklevv cemerdpatf veslkkrgyg vqlvdvqeqe
      781 ppflprkrvv ilsgcpigre dpvelpsdvr clrifecpdi rslsdmpffq qtnklgfcsi
      841 hhcrgiesvl dlsstsqpcn sfqnlellwl enldnlhmlv kvaeeasvvs tssslpmpgi
      901 fshlesfvik gcpnmkqlfp cklahdlqnl kklvvchcvq meeiisseee eesrkgkgin
      961 trtrfslptl qqlvlaylpe lksicssnra vicdslwdie vrecmklkrm plylphfrdt
     1021 hqsvpsedic isprewwesv ewdypkakev lrpwlyfv
//
LOCUS       XP_016714720            1385 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance RPP13-like protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016714720
VERSION     XP_016714720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859231.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 52% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1385
                     /product="putative disease resistance RPP13-like protein
                     1"
                     /calculated_mol_wt=156543
     Region          9..99
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(76,80,83,115,118,123..125,127..129,131..132)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          208..407
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <559..>667
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          571..593
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          594..616
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          617..639
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..665
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <774..>1045
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          854..875
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          919..943
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          944..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <966..>1177
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          972..997
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          998..1021
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1129..>1328
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     CDS             1..1385
                     /gene="LOC107928079"
                     /coded_by="XM_016859231.2:1..4158"
                     /db_xref="GeneID:107928079"
ORIGIN      
        1 msiaggetal svfleffakl asydqilnfv tqkqvnqqlk qwqkilpsiq avlndaeekq
       61 mkdpnvkiwl thlqnlaydv gdvlnefave alhrklhege astskaqkst aswftsfins
      121 raftfnkkmi sklqeitdel nglareknrl glrqidetam skrvkvslqf mslvheshvy
      181 grekemaeil elllcnngng ngngaslihi fgdggigkta lvrflycsdd vkkafhhsfw
      241 irvskdfdvt lvtktilqsi sddklfsrri llvldnvrhe nyndltlllk pfsvgtkvil
      301 ttrscsvvss vvssakayll qklshkdcls vfthhalkan dfsehqelet fgenivkkcn
      361 glplaakvig cllgthveyg vwkyvsesei wdlqqeqcgv ipalllschh lppylkrcfa
      421 ycsllpkgye fekeeiillw kaegflkqad skahiedlgs ryfqdlvsrs ffqtsvrdky
      481 ryvmhdlind laqlvsgeic lkleddkqpk ipkgtrhssy vcglydgvek favfdhmkhl
      541 raflpfmmpr dgtcyitntv lvdllpklrc lrvlslkgyg itvlpdifen lvqlrylnfs
      601 htlikslpas ictlynletl ilkesllewl psdierlvnl nhidiggvkm kampygigkl
      661 adlrrlsdfi lgagdgyrir elknlhlkgd lslsglenvv eardaleakl ihkpgldalr
      721 ltwtsisgss irdkvveeev lnmlephrdl kvlviesyag tkfpnwiads sfknlwsldl
      781 nncrnckilp signlpllkd lcirgmhtvt klgiefygen hlnafvslet lcfkdmsnwk
      841 ewdidehavk fpclrefciv ncpqlsgnfp sslhsletlv irqctqlvvs vsnlpqlhdl
      901 eidrcaelvl rddadmpplr kvslsnvskf splterlvpg ltnldhlris ncnelaslsw
      961 kqfslvrhlr slrslemssf pllevevqql qlekvctiet ltignceklq rlpqdwrflt
     1021 fltemqikgc pcivsfsknn lppalkrlvi qscanlrclv dqgentsidn tfllehleim
     1081 dcpslvslsl pnrlqvlivs ycsklsslss sgelpvglkq lvikdclvle sivhtihets
     1141 flelfeiwrc rnikalpqgl kkldhvekin ilqcqslvsl tasglparkl kslcimdcqs
     1201 lgdlpnmqnl talkelslsy cspdlpfpke glpttltsls vtgpklcrtl lqwglyrlts
     1261 lkklsidgee cphvvtfppe gcvlpptltt itisgfgnlr slsttgfrnv dslrelwvld
     1321 cpeleslpek evlvsvwkly iwrchvtlla qfimndgaew lkishipdvi vdrqsiipka
     1381 twvqy
//
LOCUS       XP_040943779            1013 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At1g61300 [Gossypium hirsutum].
ACCESSION   XP_040943779
VERSION     XP_040943779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087845.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1013
                     /product="probable disease resistance protein At1g61300"
                     /calculated_mol_wt=115528
     Region          170..337
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <421..>593
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          470..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..517
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          518..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..587
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          588..612
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1013
                     /gene="LOC107928100"
                     /coded_by="XM_041087845.1:1..3042"
                     /db_xref="GeneID:107928100"
ORIGIN      
        1 mefvgpicea lkclgdptct yiehhrkled rmndllakqr qlnamkrdve lrknaelrlg
       61 rcvrqevenw llevqtvngk iqnvdermqn vscfsrgrlg kqvsqtveev keiieqgrft
      121 galviddpst agvpfqledl egetaviadi rkhlmsdeig mvgvcgmggi gkttimkhiy
      181 nqlleetksk plfekiiwvt vsqdfnitrl qediaddmni kdlpkseekr aavlrnklrq
      241 iryvlilddv wegfvlekvg ipepissnrs sifgknlgdi vrecdklpla ikviassmkg
      301 iydvvewrna ltelrnhvts vkgtdkeiyg rlkfsfdrlk dsniqncfly cslypedyri
      361 prvelieywi degfleigsr qqlhdrghti lnrlinncll ekarddvkmh dvmrdmalyi
      421 khlhfivkag tgleelpsep ewkkdveras fmmnmvseip pslspncenl stlllqnnes
      481 lerisesffq hmhslsildl sytsieqlpt svsnleklka lvlrgcynlr yvpsleklea
      541 lrkldlrgta iekvpkglel lsnltylnlc teslkelpva ilprlsclqc lilyvessrv
      601 kmtgfdaakl tklerfegrf telidfnayt ksiqcqqlts yllvmaplea kfnkrikgin
      661 cvyrfkllnv dsgkgwqkvm kcasglqgve tiglkrntki levsgdlemg ptkiaanskk
      721 rgvqvqlvde rwdptflpmk yvilsgcpig radpaelpsd vralkifgch nirsvsdmpf
      781 fqqtnelgfc sihdcrgies vldlsspsqs ctpfenlell wlenlenlhv lvklaeasvv
      841 stlssqsipa ifshlksfyi egcsnmkqlf pfdlvhdlqn lenlivrgcg qieeiigpke
      901 eednhkgngt qaptkfslpk lkeleltclp elksicssnr emvcnslrki kvrnctklkr
      961 mplylplfqd thqsapsahp feriricpke wwesvewdyp nakevlrpwl nly
//
LOCUS       XP_016714719             662 aa            linear   PLN 06-AUG-2024
DEFINITION  probable disease resistance protein At4g27220 [Gossypium hirsutum].
ACCESSION   XP_016714719
VERSION     XP_016714719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859230.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..662
                     /product="probable disease resistance protein At4g27220"
                     /calculated_mol_wt=75853
     Region          147..383
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <500..>639
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          516..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          541..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          587..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..662
                     /gene="LOC107928078"
                     /coded_by="XM_016859230.1:1..1989"
                     /db_xref="GeneID:107928078"
ORIGIN      
        1 mefvgpicea lkclgdptct yiehhrkled rmndllakqr qlnamkrdve lrieaelrwg
       61 rllrkevenw llevqtvngk vqevdkrkqn vscfsrgrlg kqvsqtveev keiidqgrft
      121 galviddpst agvpfqlehl egeteviedi wkhlmsdeig mvgvcgmggi gkttimkhih
      181 dqlleetksk plfekiiwvt vsqdfnitrl qqdiadamni kdlpeseekr aavlrnklrq
      241 iryvlilddv wegfvlekvg ipepissnrs klvltsrlke fcksigchei vqvpllsfde
      301 smnlflvhtg hevlkvpsle kilgdivrec drlplaikvi assmkgiydv vewrnaltel
      361 rnhvtsvkgt dkeiygrlkf sfdrlkdlni qncflycsly pedyriprme lieywiderf
      421 lemgsrqqlh drghtilnrl inncllekag ddvkmhdvmr dmalyikqlh fivkagtgle
      481 elpsnsewkk dverasfmmn kvseiplsls pncgnlstll lkmnvslkri sesffqqlhs
      541 lsildlsytg ikqlpnsvsn letlnalvlr gccnlryvps leklkalrkl dlrdtaikev
      601 pkglemlvnl tyldlstesl kefpmailpq lsclqylify sksctvkldg seaarfkear
      661 ei
//
LOCUS       XP_016714718             211 aa            linear   PLN 06-AUG-2024
DEFINITION  secreted RxLR effector protein 161-like [Gossypium hirsutum].
ACCESSION   XP_016714718
VERSION     XP_016714718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859229.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..211
                     /product="secreted RxLR effector protein 161-like"
                     /calculated_mol_wt=23409
     Region          <5..56
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          141..>209
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     CDS             1..211
                     /gene="LOC107928077"
                     /coded_by="XM_016859229.1:1..636"
                     /db_xref="GeneID:107928077"
ORIGIN      
        1 mqimfemtdl gimsyllgme vcqidqgifi gqhafaskll tkfhmenckp vstplvigqk
       61 lssygdeekv dereyrslig cllhltatrp dlmhsvslls hfmhscntsh lkaakrilry
      121 lkgtlkfgvm fksggqlkls gysdsdwrgs iddmrstsgy lfslgsgafc wsskkqqtva
      181 qstaeaeyia atgavsqaiw lrkllcdlne e
//
LOCUS       XP_016714715             296 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RING1-like [Gossypium hirsutum].
ACCESSION   XP_016714715
VERSION     XP_016714715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859226.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..296
                     /product="E3 ubiquitin-protein ligase RING1-like"
                     /calculated_mol_wt=33943
     Region          196..238
                     /region_name="RING-H2_RNF126-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF126, RNF115, and similar proteins; cd16667"
                     /db_xref="CDD:438329"
     CDS             1..296
                     /gene="LOC107928075"
                     /coded_by="XM_016859226.2:1..891"
                     /db_xref="GeneID:107928075"
ORIGIN      
        1 mqlqqykkef kaltekklqr ivficicilr yaltvkqisw isnkqeiklt flkqitnnsd
       61 nqeprgrpwl rrrnnllecg genrplerlr rhrsrsldgt ddrdqgpesl ghprtwiivp
      121 pqgpfglgqa gptfpheipg rpaldprnff sgpglnelid qltqndrpgv ppasestida
      181 iptvkitesh lrsdsqcpvc kekfkvgeea relpcnhiyh sdcivpwlrl hntcpvcrhe
      241 lpvsstdeqs sndcfsepev sssrrgwrlr qlasnlwpfh rrhqrinpet ygthgn
//
LOCUS       XP_040943781             701 aa            linear   PLN 06-AUG-2024
DEFINITION  trifunctional UDP-glucose
            4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose
            3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like [Gossypium
            hirsutum].
ACCESSION   XP_040943781
VERSION     XP_040943781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087847.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..701
                     /product="trifunctional UDP-glucose
                     4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose
                     3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like"
                     /calculated_mol_wt=79781
     Region          <1..164
                     /region_name="PLN03064"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming); Provisional"
                     /db_xref="CDD:215556"
     Region          174..700
                     /region_name="PLN02260"
                     /note="probable rhamnose biosynthetic enzyme"
                     /db_xref="CDD:215146"
     CDS             1..701
                     /gene="LOC121214094"
                     /coded_by="XM_041087847.1:1..2106"
                     /db_xref="GeneID:121214094"
ORIGIN      
        1 msaeerekrh qhnfhhvtkh taqewaemfv selndtvvea qlrtskeppe lpqndavery
       61 lrlkwmflrh tkgdwmttmp ehlnmewvds lkhvfeyfte rtprsefeir ttslvwnyky
      121 advefgrlqa rdmlqhldrp isnasvdvvq gsrsvevrpv gvtknwfhyv flypknilit
      181 gaagfiashi anrlirnypd ykivvldkld ycsnlknllp sksspnfkfv kgdigsadlv
      241 nyllitesid timhfaaqth vdnsrfihvs tdevygetde davvgnheas qllptnpysa
      301 tkagaemlvm ayamrgktlp ihgdgsnvrs ylycedvaea fevilhkgev ghvynigtkk
      361 errvidvakd iseelgwser tvweeglkkt iewytqnpew wgdvsgallp hprmlmmpgg
      421 rhfdseegkg tsfesgpnqt rmvvptfkts sstqkpalkf liygrtgwig gllgqlcekq
      481 gipfeygrgr ledrsslmad iqnikpthvf naagvtgrpn vdwceshkte tirtnvagtl
      541 tladvcrehg llmmnfatgc ifeydaghpe gsgigykeed kpnftgsfys ktkamveell
      601 keyenvctlr vrmpissdln nprnfiakia rynkvvnipn smtildellp isiemakrnl
      661 kwvnftleeq akvivaprsn nemdasklkn efpdllpikd h
//
LOCUS       XP_040943782             745 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943782
VERSION     XP_040943782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087848.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..745
                     /product="uncharacterized protein"
                     /calculated_mol_wt=84601
     Region          77..171
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          468..564
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(483,485,487,511..513,558)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            483..485
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            483
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(511..514,518..521)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..745
                     /gene="LOC107890091"
                     /coded_by="XM_041087848.1:1..2238"
                     /db_xref="GeneID:107890091"
ORIGIN      
        1 maqtirqlae apteqpplci ayptmdtdfe lksgliqllp tfrglqnenp hkhlkefhmv
       61 clsmkpegvt edqiklrafp fsladsakew lfylppgsit twadlsrlfl nrffpasraa
      121 elrreivgir qkeaesfydy weqfkklcas cpqhgiteqs llqyfyeglk pidmnmvdaa
      181 sggalvnmtp qqardlistm aansqqfran tepprrvhql snstledkvd kltnmmnsli
      241 aekaktarlc gicatpdhat dacpslyddt tthldavgnf pgppqrqydp yantynpgwr
      301 dhpnlsygan lrnnqpyqnr fpqqsqgsep nprqnanvvt lrsekvlesi pdrnlaqeia
      361 qekpkkdeqv rpkpplpkiq ppfperfnqc rrgkedkeil etfrnveini plldaikkip
      421 ryakflkdlc tnkrkltgne rvnvgknvsa vlqrkmpakc kdrgmfaipc kighlgikka
      481 mcdlgasinv mpysiyesln agfltktcvi iqladrsvvh pegvledvlv kvnelifpad
      541 fyvikkeeds tpgssdfllg rpflstastk idvrsgtltm efdgeivkfn vydaishpse
      601 ilsvnridii dslveenepe leleptgkar kldiqelkei rndayenari ykdktklfhd
      661 kriaqkhfsv gqkvllynsv lklfsgkvrs rwqghfivtk vfthgaieie seesgkrfvv
      721 ngqrlkpfye nfqaytvkki ylepp
//
LOCUS       XP_040943783             430 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190-like [Gossypium hirsutum].
ACCESSION   XP_040943783
VERSION     XP_040943783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087849.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..430
                     /product="disease resistance protein At4g27190-like"
                     /calculated_mol_wt=48737
     Region          2..>129
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          251..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <274..>418
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          304..343
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          344..380
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..430
                     /gene="LOC121214095"
                     /coded_by="XM_041087849.1:1..1293"
                     /db_xref="GeneID:121214095"
ORIGIN      
        1 mtelkvlslt iangssrvis lyalrflpkl ralhlenfed fmflgnlmtl eilslrgsns
       61 eglakqlgrl enlkmldlmr lenlscppsv iqrlsqlkel ylpgleyrki sndifletif
      121 lkrltrlsle vsslhfppdf efpelesyti cinhsssrld yrfeearsli vekvfpyiav
      181 sqllgnlesl vvsgikdeyv ecltnktqqk vsvsmilrnl kqvtieecsn lkvvfqmeev
      241 eengapllsn lkilcledlp dlsciwelpt qhvrleslvy ltirkcprlk slfslslaqs
      301 lvlleeldmr fcdelkqivt elegdegeis sainshtslc fpkltklnis scprleyifp
      361 tslashglqg ltrnicccpk lkqvfrvakv smlkyqqslr slssfsmsgc plltdsvvhl
      421 eaekasikvr
//
LOCUS       XP_016714710             754 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 [Gossypium hirsutum].
ACCESSION   XP_016714710
VERSION     XP_016714710.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859221.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714710.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..754
                     /product="disease resistance protein At4g27190"
                     /calculated_mol_wt=86424
     Region          4..>294
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          164..403
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          504..>676
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          535..555
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          581..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          601..623
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          624..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..675
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..754
                     /gene="LOC107928069"
                     /coded_by="XM_016859221.2:67..2331"
                     /db_xref="GeneID:107928069"
ORIGIN      
        1 mgsewglsaa sglvapllvd ylvkpierri rylfrfhkiv qelhqnqqdl aaketqvkdd
       61 ieeaklqirt qviydqvdew ltkaenalkd vkvldsriee nkrcfrlcpn wcwryqlsqe
      121 ienktleiad lvkksefkrv ghraklpnln lvtskdhvdl ksseaafnki mealkddkvk
      181 kigvwgmggv gkttlvrnvg gevkgfdrvi mvtvsetldi ekiqnkiadn idlkfekktg
      241 evkaaelwsr lsngkflvil ddlwkewndd gdlrkigipl vkdekgckii lttrnynvyq
      301 hmecektvqv kvleddeawt lfemnaglkk adshvigeak kiakeckglp laivtlakal
      361 kgkaldrwkd srkklersal meipsiqter eknayislki syehlknkms qtcfllcaly
      421 leddsinved lvryawglnl ydktnsieem riqvleviny lkdsclledg dvgryvklhd
      481 ivrdvalwia seegssfmik srmeilnkss esskaisllg sgrkkfpdrl mhskleilll
      541 nncdiqgtcf lgmrelkvln ltavygtgvi slyaltflpk lralhldsfe yfsflgnltt
      601 leilslsgwv fkgfadelem lenlkildli ncafpggfqs kviqrlsqle elypprlhin
      661 ndifleikff trlrrlfvev pslhcpldfk fpelekykig ingysihfgy remsgfgytf
      721 dtarslkiee vfpynafsql vgnleslevs kikd
//
LOCUS       XP_016714761            1024 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 [Gossypium hirsutum].
ACCESSION   XP_016714761
VERSION     XP_016714761.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016859272.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714761.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1024
                     /product="disease resistance protein At4g27190"
                     /calculated_mol_wt=115348
     Region          4..234
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          321..>506
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          367..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          388..410
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..430
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          431..453
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          454..478
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          479..500
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1024
                     /gene="LOC107928101"
                     /coded_by="XM_016859272.2:1045..4119"
                     /db_xref="GeneID:107928101"
ORIGIN      
        1 mealkdgkvn migvwgmggv gkttlvkevg kktkelgcfr kvievvvsqk siieniqyki
       61 adfldlefkk ktkegraeel wlrlkneekv liilddmwne vhlkeigipl nenrkgckii
      121 lttrlmkvce smecqviipi dvldseeawa lfrmkanlne rvsmdvleea ekvakeckgl
      181 pvaivtlaaa lkktktregw kvarkkless rlveignige eeknaylcik isydylkket
      241 tkrcflwcgl ypedhsieve dlvryawcle lfgkadsige vriqvleaid ylkdscllle
      301 dgdggryvkl hdivrdvalw iaseeksgfm iksrlellnk ssesckaisl ldseeknfpd
      361 rlilskleil llknckvqgt cflgmtelkv lslegstgvi slyalsslqk lrvlhlenfh
      421 dfsflrnlrt leilslrhse lngladelgr lkdlkmldli dcelsssfsp nvirrlsqle
      481 elylaimtnd ifpviksltr ltrlnlwvss lhfppdfefp eleeynicin ygkmsrivna
      541 arslhinqev fpynavsqll mnleslvvsg indeyveclt nktqqkesvs milrnlkqva
      601 idhcsnlkvv fqmeeveene apflsnlkil cladlpdlsc iwelptqhvr leslvylnir
      661 kcprlkslfs lslaqslvll eklyilfcde lkqivteleg degeissain shtslcfpkl
      721 tvlyiytcdg leyifptsla shglqgltln ihgcpklkqv fgvandsmlq yqqswrslss
      781 fsmsgcpllt dsvvhleagn asiegvrlsa fkdsfktskq lrlseiedhn mvpeanedgl
      841 ngvtslqlek ckdleclvdt tatatkngpt safthletls iakmprleal ckgqppqgfl
      901 knlkhlgivn ccklkslfsp sliqslvlle elnigccdel ktlfadpkid geiesktssl
      961 plrlpklntl sikecakley vvpitlaqgl paleslwvss cgalkqqcpt klycqstife
     1021 krks
//
LOCUS       XP_040943784            1154 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 [Gossypium hirsutum].
ACCESSION   XP_040943784
VERSION     XP_040943784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087850.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 61% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..1154
                     /product="disease resistance protein At4g27190"
                     /calculated_mol_wt=131819
     Region          108..321
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <481..>568
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          487..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          510..534
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          535..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          744..769
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          786..809
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          810..835
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          836..872
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          951..980
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1008..1033
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1034..1071
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1072..1097
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1154
                     /gene="LOC107928068"
                     /coded_by="XM_041087850.1:1..3465"
                     /db_xref="GeneID:107928068"
ORIGIN      
        1 mclessfqhy vdewltnaen alndvqslvh rveenkrcfg lcstwcwryr lskeiekkiv
       61 yisklvedsh fkqighrael pglefftseh ifasksstaa fnkimealkd dkvnmigvwg
      121 mggvgkttlv kevgkktkel rcfhkvievv vsqtsiieni qykitdfldl kfekttkegk
      181 aeelwlrlkk eekvliildd mwnevqlnei glplnengng ckiilttrrm tvcesmecqv
      241 ivpidvldnd eawtlfrmka yldervsrdi ietakevake ckglpvaivt lakalkgtkt
      301 vkgwevarkk lersrlmevg nieeeeekna ylcvkmsyey lkketakrcf llcalypedh
      361 sidvkhlvry awglelfgka dsieevriqv leaidylkds clllkdedve ryvklhdivr
      421 dvalwiaske esdfliksrl ellnesfepc kaisllnreh kvfpekwciq mlrscclmtv
      481 iyklttlecl slrgtefegl adelvrlvnl kildltgcrf ssrfppnvir rlykleelyl
      541 kgssigeesd dilleikflt rltalslsis sshfiedfef prleeynifl rgtqdklgcp
      601 hpeqwgkfli gearkisyei qgldsvvnlt krslkiegvf pynvvsqllg nlesfqvfdi
      661 kdeyiegltd qtqqnvsvsv ilqnlkqvri encmnlevvf qtekvegnea ppllsnlksl
      721 rlkrlidlsc iwelptqhvr leslvdlrie dcpslkslfs vslaqglvll eklkiigcge
      781 lkqivteleg deeeisrsid shnslcfpkl revhiencdg leyifptkma aqgprvltls
      841 iknccrlkqv irvakdmven divfqqlqfl rylssfsvsg cpqltdsgah ldaeeayleq
      901 qlkadaaare aeaavreaqa tareaeaaar eaeqrqklck ghppqgflkn lkellirdcn
      961 klqvvlsmde llyngeplsk lqslelenla elrwlfkgfp hsfifqslkv vniggcgvlk
     1021 slfspsliqs lvlleklqir schelktlla epesddemes kssslplffs klktldihhc
     1081 skleyvvpit laqglpsles vsisrcyelk qvfsmakeqd gvqhdgllll aslqhlnlew
     1141 llkltsfvpq nyiv
//
LOCUS       XP_040943786             327 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943786
VERSION     XP_040943786.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087852.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..327
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37005
     Region          36..94
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     CDS             1..327
                     /gene="LOC121214097"
                     /coded_by="XM_041087852.1:274..1257"
                     /db_xref="GeneID:121214097"
ORIGIN      
        1 mvrpklalif llalalslfp hastarsigk hcgvtscgnl svsypfrlks qpqgcglswf
       61 elvcnnnrti fptedgdfyv qnisyfnkti hlqdvdvanh ncsiplsslp lppidnitfq
      121 ndfslyeysy seysniyvvn csmkmnkswh gvnyinasrc ssstqtnsnf yyfvdggtpp
      181 sdfnpsctve arvpislhni sglstfdiyk klmmgtrikw dlrlpnnvir dwssvvnlll
      241 sflrvlalva lyilsnpyri ldkpiigfaf tflpdihvth iscmsfnslp nsfpcnnrdv
      301 tdedifgdml ldysyyiqik kktfvsr
//
LOCUS       XP_016707793             350 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin protein ligase RIE1 [Gossypium hirsutum].
ACCESSION   XP_016707793
VERSION     XP_016707793.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852304.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707793.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..350
                     /product="E3 ubiquitin protein ligase RIE1"
                     /calculated_mol_wt=38479
     Region          298..340
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..350
                     /gene="LOC107922318"
                     /coded_by="XM_016852304.2:351..1403"
                     /db_xref="GeneID:107922318"
ORIGIN      
        1 msstslsdat ttsasdphap llrsrqsdas aarssalall lgrvtgrrga smlvretaar
       61 eleerradwg yskpvvaldi lwntafvvvs vvmlictvne rpntpvrvwi cgyalqcsvh
      121 vvlvwleykr rnarrasgrg eergedvtds eddedsnqss vtkrcesvnt lasfiwwivg
      181 fywvisggni llqqaprlyw lavvflafdv ffaifcivla cligialccc lpciiailya
      241 vagqegasea dlsilpkyrf qiinigekps vgvgkmvpve tssgylaner illpedaecc
      301 iclcsyedgv dlhalpcnhh fhstcivkwl kmnatcplck ynilkgteqv
//
LOCUS       XP_016707548             621 aa            linear   PLN 06-AUG-2024
DEFINITION  microtubule-associated protein 70-2 [Gossypium hirsutum].
ACCESSION   XP_016707548
VERSION     XP_016707548.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852059.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053437.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016707548.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D01"
     Protein         1..621
                     /product="microtubule-associated protein 70-2"
                     /calculated_mol_wt=69223
     Region          70..603
                     /region_name="MAP70"
                     /note="Microtubule-associated protein 70; pfam07058"
                     /db_xref="CDD:399798"
     CDS             1..621
                     /gene="LOC107922169"
                     /coded_by="XM_016852059.2:476..2341"
                     /db_xref="GeneID:107922169"
ORIGIN      
        1 maeidgeave vgnnarsesp vrvtssstgv pppltvsasf kesggkgssr rravrpsfda
       61 dnefitllhg sdpvkvelnr lenevrdkdr elgeaqaeik alrmserqre kaveeltdel
      121 lrmeeklklt esllesknle ikkindekka smaaqfaaea tlrrvhaaqk dddmppieai
      181 lapleaelkl arqeiaklqd dnkaldrltk skeaalleae rtvqvalaka smvddlqnkn
      241 qelmkqieic qeenkildkm hrqkvaevek ltqtvrelee avlaggaaan avrdyqrkvq
      301 emneerktld relarakvta nrvatvvane wkdandkvmp vkqwleerrf lqgemqqlrd
      361 klaitertak seaqlkekyq lrlkvleesl rgssnslsrs tsdvrsmsng psrrqslggv
      421 dnfskltsng flskkspssq lrsslssstv lkhakgtsks fdggtrsler aklllngtgs
      481 ntsfnqpsdr tkeseaqnde kptdfqpvht ednvpgvlyd llqkevialr kaghekdqsl
      541 kdkddaieml akkvetltka meveakkmrr evaamekeva amrvekehen rvkrfgnskg
      601 saaqlltgrn asrsgltrst q
//
LOCUS       XP_040943802             240 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box transcription factor 23-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943802
VERSION     XP_040943802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087868.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..240
                     /product="MADS-box transcription factor 23-like isoform
                     X1"
                     /calculated_mol_wt=27705
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          82..172
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..240
                     /gene="LOC107908410"
                     /coded_by="XM_041087868.1:279..1001"
                     /db_xref="GeneID:107908410"
ORIGIN      
        1 mgrgklvirr idnstsrqvt fskrrngllk karelsilcd aevgliifss tgklydyast
       61 ssmrsviery nrtkeenhhq mnpasevkfw qrevaslrqq lqylqeyhrq lmgeelsgls
      121 indlqnlenq lemslkgvrm kkdqiltdev kelnnkghli hqenlqlhkk ldlmyqente
      181 lqkkaygtrq aneasrsspp nytfnngydl raavhlqlsq plpqkndape kpmklglqlh
//
LOCUS       XP_040943803             239 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box transcription factor 23-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943803
VERSION     XP_040943803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087869.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..239
                     /product="MADS-box transcription factor 23-like isoform
                     X2"
                     /calculated_mol_wt=27618
     Region          2..77
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          81..171
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..239
                     /gene="LOC107908410"
                     /coded_by="XM_041087869.1:276..995"
                     /db_xref="GeneID:107908410"
ORIGIN      
        1 mgrgklvirr idnstsrqvt fskrrngllk karelsilcd aevgliifss tgklydyast
       61 smrsvieryn rtkeenhhqm npasevkfwq revaslrqql qylqeyhrql mgeelsglsi
      121 ndlqnlenql emslkgvrmk kdqiltdevk elnnkghlih qenlqlhkkl dlmyqentel
      181 qkkaygtrqa neasrssppn ytfnngydlr aavhlqlsqp lpqkndapek pmklglqlh
//
LOCUS       XP_040943804             142 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box transcription factor 23-like isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943804
VERSION     XP_040943804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087870.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..142
                     /product="MADS-box transcription factor 23-like isoform
                     X3"
                     /calculated_mol_wt=16447
     Region          2..77
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          81..>141
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..142
                     /gene="LOC107908410"
                     /coded_by="XM_041087870.1:279..707"
                     /db_xref="GeneID:107908410"
ORIGIN      
        1 mgrgklvirr idnstsrqvt fskrrngllk karelsilcd aevgliifss tgklydyast
       61 smrsvieryn rtkeenhhqm npasevkfwq revaslrqql qylqeyhrql mgeelsglsi
      121 ndlqnlenql emslkgvrmk kv
//
LOCUS       XP_016691583             412 aa            linear   PLN 06-AUG-2024
DEFINITION  squalene synthase-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016691583
VERSION     XP_016691583.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836094.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691583.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..412
                     /product="squalene synthase-like isoform X1"
                     /calculated_mol_wt=46784
     Region          35..367
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(47..51,312..315)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173831"
     Site            order(49,51,70,74,77,81,168,173,177,202,205,212..213,
                     216..217,225,285..286)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173831"
     Site            order(51,70,77,81,168,176,180,205,212..213,217,225,
                     285..286,290)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173831"
     Site            order(77..81,213..217)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173831"
     Site            77..81
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173831"
     Site            213..217
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173831"
     CDS             1..412
                     /gene="LOC107908820"
                     /coded_by="XM_016836094.2:302..1540"
                     /db_xref="GeneID:107908820"
ORIGIN      
        1 mgslgalvkh pgdfypllkl kmasrhaerq ipsephwafc fsmlhkvsrs falviqqldt
       61 elknavcify lvlraldtve ddtsvatdik vpileefyrh iydrdwhfsc gtknykvlmd
      121 efhhvstafl elekgyqeai editkrmgag makfickeve tvgdydeych yvaglvglgl
      181 sklfhacgte dlapdtlsns mglflqktni irdyledine ipksrmfwpr qiwgkyvnkl
      241 edlkyeensv kavqclndmv tnalihvddc lkymsalrdp aifrfcaipq vmaigtlalc
      301 ynnievfrgv vkmrrgltak vidrtntmad vygafydfsc mlkakvdknd pcaqktssrl
      361 dsilktcrds gvlnerksyi ipnqtnytpl lavllfilla itlanrgpne pn
//
LOCUS       XP_040943806             228 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein AGL24-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943806
VERSION     XP_040943806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087872.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..228
                     /product="MADS-box protein AGL24-like isoform X1"
                     /calculated_mol_wt=25805
     Region          11..81
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(11..12,14,16,21,23,27..28,31..32,34..35,38..39,
                     41..42,46)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(29,36..37,40..41,43..44,47,52,54,56,62,64,70,72..73,
                     76,79..80)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            67
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          103..180
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..228
                     /gene="LOC107908929"
                     /gene_synonym="MADS29"
                     /coded_by="XM_041087872.1:214..900"
                     /db_xref="GeneID:107908929"
ORIGIN      
        1 msfglyfrmt rkriqikkid nvaarqvtfs krrrglfkka helsvlcdae ialivfsatg
       61 klfdyfstsm evierrnqqs gkgidrsvts pchglqvesr tcamlskema ekthqlrqlk
      121 geelqglgye glkhleklve gglrrvtetk derffkeist lkmkeaelve enqqlkqqme
      181 nlphmvhvqp sesiahvgss enptqpynns hdisltlgla fpnsplkg
//
LOCUS       XP_040943807             225 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein AGL24-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943807
VERSION     XP_040943807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087873.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="MADS-box protein AGL24-like isoform X2"
                     /calculated_mol_wt=25647
     Region          11..81
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(11..12,14,16,21,23,27..28,31..32,34..35,38..39,
                     41..42,46)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(29,36..37,40..41,43..44,47,52,54,56,62,64,70,72..73,
                     76,79..80)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            67
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          103..180
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..225
                     /gene="LOC107908929"
                     /gene_synonym="MADS29"
                     /coded_by="XM_041087873.1:212..889"
                     /db_xref="GeneID:107908929"
ORIGIN      
        1 msfglyfrmt rkriqikkid nvaarqvtfs krrrglfkka helsvlcdae ialivfsatg
       61 klfdyfstsm evierrnqqs gkgidrsvts pchglqvesr tcamlskema ekthqlrqlk
      121 geelqglgye glkhleklve gglrrvtetk derffkeist lkmkeaelve enqqlkqqme
      181 nlphmvhvqp sesiahvgss enptqpynns hdisltlgkt wvpvr
//
LOCUS       XP_040943808             220 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein AGL24-like isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943808
VERSION     XP_040943808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087874.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="MADS-box protein AGL24-like isoform X3"
                     /calculated_mol_wt=24803
     Region          3..73
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(3..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,64..65,
                     68,71..72)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          95..172
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..220
                     /gene="LOC107908929"
                     /gene_synonym="MADS29"
                     /coded_by="XM_041087874.1:213..875"
                     /db_xref="GeneID:107908929"
ORIGIN      
        1 mtrkriqikk idnvaarqvt fskrrrglfk kahelsvlcd aeialivfsa tgklfdyfst
       61 smevierrnq qsgkgidrsv tspchglqve srtcamlske maekthqlrq lkgeelqglg
      121 yeglkhlekl vegglrrvte tkderffkei stlkmkeael veenqqlkqq menlphmvhv
      181 qpsesiahvg ssenptqpyn nshdisltlg lafpnsplkg
//
LOCUS       XP_040943809             220 aa            linear   PLN 06-AUG-2024
DEFINITION  MADS-box protein AGL24-like isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943809
VERSION     XP_040943809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087875.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="MADS-box protein AGL24-like isoform X3"
                     /calculated_mol_wt=24803
     Region          3..73
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(3..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,64..65,
                     68,71..72)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          95..172
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..220
                     /gene="LOC107908929"
                     /gene_synonym="MADS29"
                     /coded_by="XM_041087875.1:142..804"
                     /db_xref="GeneID:107908929"
ORIGIN      
        1 mtrkriqikk idnvaarqvt fskrrrglfk kahelsvlcd aeialivfsa tgklfdyfst
       61 smevierrnq qsgkgidrsv tspchglqve srtcamlske maekthqlrq lkgeelqglg
      121 yeglkhlekl vegglrrvte tkderffkei stlkmkeael veenqqlkqq menlphmvhv
      181 qpsesiahvg ssenptqpyn nshdisltlg lafpnsplkg
//
LOCUS       XP_016693023             309 aa            linear   PLN 06-AUG-2024
DEFINITION  teosinte glume architecture 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693023
VERSION     XP_016693023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837534.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="teosinte glume architecture 1-like isoform X1"
                     /calculated_mol_wt=33336
     Region          25..99
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <185..231
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..309
                     /gene="LOC107909848"
                     /gene_synonym="SPL21"
                     /coded_by="XM_016837534.2:436..1365"
                     /db_xref="GeneID:107909848"
ORIGIN      
        1 mesapssasf krarppgsgn qvpsclvdgc tadlskcrdy hrrhkvcevh sktpkvsirg
       61 qeqrfcqqcs rfhslvefde gkrscrkrld ghnrrrrkpq pnaltvnsgs llsnppgsry
      121 llfsspqifs ttsmtdsstg avkvktdiss slnfssrnss fvgasslnyk gerqfsflqs
      181 ansshpgvsv cqplvnanps ssnggisqkm llnglnrtve snralsllss qpaetreisl
      241 spmmqsgsts slipnlqykg lgmegeqvgt ilatdqsant dlhgngvfri ghpgssasgt
      301 hhrltfswe
//
LOCUS       XP_040943811             309 aa            linear   PLN 06-AUG-2024
DEFINITION  teosinte glume architecture 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943811
VERSION     XP_040943811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087877.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="teosinte glume architecture 1-like isoform X1"
                     /calculated_mol_wt=33336
     Region          25..99
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <185..231
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..309
                     /gene="LOC107909848"
                     /gene_synonym="SPL21"
                     /coded_by="XM_041087877.1:217..1146"
                     /db_xref="GeneID:107909848"
ORIGIN      
        1 mesapssasf krarppgsgn qvpsclvdgc tadlskcrdy hrrhkvcevh sktpkvsirg
       61 qeqrfcqqcs rfhslvefde gkrscrkrld ghnrrrrkpq pnaltvnsgs llsnppgsry
      121 llfsspqifs ttsmtdsstg avkvktdiss slnfssrnss fvgasslnyk gerqfsflqs
      181 ansshpgvsv cqplvnanps ssnggisqkm llnglnrtve snralsllss qpaetreisl
      241 spmmqsgsts slipnlqykg lgmegeqvgt ilatdqsant dlhgngvfri ghpgssasgt
      301 hhrltfswe
//
LOCUS       XP_040943812             309 aa            linear   PLN 06-AUG-2024
DEFINITION  teosinte glume architecture 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943812
VERSION     XP_040943812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087878.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="teosinte glume architecture 1-like isoform X1"
                     /calculated_mol_wt=33336
     Region          25..99
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <185..231
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..309
                     /gene="LOC107909848"
                     /gene_synonym="SPL21"
                     /coded_by="XM_041087878.1:274..1203"
                     /db_xref="GeneID:107909848"
ORIGIN      
        1 mesapssasf krarppgsgn qvpsclvdgc tadlskcrdy hrrhkvcevh sktpkvsirg
       61 qeqrfcqqcs rfhslvefde gkrscrkrld ghnrrrrkpq pnaltvnsgs llsnppgsry
      121 llfsspqifs ttsmtdsstg avkvktdiss slnfssrnss fvgasslnyk gerqfsflqs
      181 ansshpgvsv cqplvnanps ssnggisqkm llnglnrtve snralsllss qpaetreisl
      241 spmmqsgsts slipnlqykg lgmegeqvgt ilatdqsant dlhgngvfri ghpgssasgt
      301 hhrltfswe
//
LOCUS       XP_016693020             309 aa            linear   PLN 06-AUG-2024
DEFINITION  teosinte glume architecture 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693020
VERSION     XP_016693020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837531.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="teosinte glume architecture 1-like isoform X1"
                     /calculated_mol_wt=33336
     Region          25..99
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <185..231
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..309
                     /gene="LOC107909848"
                     /gene_synonym="SPL21"
                     /coded_by="XM_016837531.2:524..1453"
                     /db_xref="GeneID:107909848"
ORIGIN      
        1 mesapssasf krarppgsgn qvpsclvdgc tadlskcrdy hrrhkvcevh sktpkvsirg
       61 qeqrfcqqcs rfhslvefde gkrscrkrld ghnrrrrkpq pnaltvnsgs llsnppgsry
      121 llfsspqifs ttsmtdsstg avkvktdiss slnfssrnss fvgasslnyk gerqfsflqs
      181 ansshpgvsv cqplvnanps ssnggisqkm llnglnrtve snralsllss qpaetreisl
      241 spmmqsgsts slipnlqykg lgmegeqvgt ilatdqsant dlhgngvfri ghpgssasgt
      301 hhrltfswe
//
LOCUS       XP_016693024             309 aa            linear   PLN 06-AUG-2024
DEFINITION  teosinte glume architecture 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693024
VERSION     XP_016693024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837535.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="teosinte glume architecture 1-like isoform X1"
                     /calculated_mol_wt=33336
     Region          25..99
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <185..231
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..309
                     /gene="LOC107909848"
                     /gene_synonym="SPL21"
                     /coded_by="XM_016837535.2:358..1287"
                     /db_xref="GeneID:107909848"
ORIGIN      
        1 mesapssasf krarppgsgn qvpsclvdgc tadlskcrdy hrrhkvcevh sktpkvsirg
       61 qeqrfcqqcs rfhslvefde gkrscrkrld ghnrrrrkpq pnaltvnsgs llsnppgsry
      121 llfsspqifs ttsmtdsstg avkvktdiss slnfssrnss fvgasslnyk gerqfsflqs
      181 ansshpgvsv cqplvnanps ssnggisqkm llnglnrtve snralsllss qpaetreisl
      241 spmmqsgsts slipnlqykg lgmegeqvgt ilatdqsant dlhgngvfri ghpgssasgt
      301 hhrltfswe
//
LOCUS       XP_040943814             222 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL9 homolog isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943814
VERSION     XP_040943814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087880.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="agamous-like MADS-box protein AGL9 homolog
                     isoform X1"
                     /calculated_mol_wt=25215
     Region          72..152
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..222
                     /gene="LOC107909849"
                     /gene_synonym="SEPALLATA3"
                     /coded_by="XM_041087880.1:864..1532"
                     /db_xref="GeneID:107909849"
ORIGIN      
        1 mfaffltnql pcfqwilscl gsismdhlkg yisinasefl smmktleryq kcshgapetn
       61 vstrealels sqqeylklka ryealqrsqr nllgedlgpl sskelesler qldsslklir
      121 strtqymldq ltdlqrkehl lneanknlkq rlmegyqvhs lqlnpnaddv gygrqpthqp
      181 qgdvffhpld ceptlqigyq pdtisavtgg psvnnymtgw lp
//
LOCUS       XP_040943815             211 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL9 homolog isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943815
VERSION     XP_040943815.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087881.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="agamous-like MADS-box protein AGL9 homolog
                     isoform X2"
                     /calculated_mol_wt=23989
     Region          61..141
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..211
                     /gene="LOC107909849"
                     /gene_synonym="SEPALLATA3"
                     /coded_by="XM_041087881.1:861..1496"
                     /db_xref="GeneID:107909849"
ORIGIN      
        1 mfaffltnql pcfqwilscl gsismdhlkg mmktleryqk cshgapetnv strealelss
       61 qqeylklkar yealqrsqrn llgedlgpls skeleslerq ldsslklirs trtqymldql
      121 tdlqrkehll neanknlkqr lmegyqvhsl qlnpnaddvg ygrqpthqpq gdvffhpldc
      181 eptlqigyqp dtisavtggp svnnymtgwl p
//
LOCUS       XP_016693037             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693037
VERSION     XP_016693037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_016837548.2:1114..2538"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_016693039             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693039
VERSION     XP_016693039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837550.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_016837550.2:1902..3326"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_016693038             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693038
VERSION     XP_016693038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837549.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_016837549.2:1378..2802"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_016693040             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693040
VERSION     XP_016693040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837551.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_016837551.2:315..1739"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_016693041             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693041
VERSION     XP_016693041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837552.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_016837552.2:303..1727"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_040943816             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943816
VERSION     XP_040943816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087882.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_041087882.1:924..2348"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_040943817             474 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943817
VERSION     XP_040943817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087883.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X1"
                     /calculated_mol_wt=52056
     Region          183..257
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..474
                     /gene="LOC107909863"
                     /gene_synonym="SPL20"
                     /coded_by="XM_041087883.1:336..1760"
                     /db_xref="GeneID:107909863"
ORIGIN      
        1 mdwnaktplq wewenlmmln atpteiprkl rsaewdiege eeldsgslys sgaaaggsgg
       61 sgsdlglisl skssksasin sssagevkvt tftleafeai pheisnkkkv skvehtgssp
      121 ifeasvgsge pllslklgkq tyfedvctgs nsktssysat pgpspspakr skpncqtkhi
      181 lrcqvegcnl dlssakdyhr khrvceshsk spkvivggle lrfcqqcsrf halsefdekk
      241 rscrrrlsdh narrrkpqtd aihfsaarps paaydgkqlm sfvwnkvpfl hnarpnenft
      301 wegtfvskss etkgyaptka gnangqlqlp gnqllnsmts rcydsnrflp vkgkqntvev
      361 lnqgveestv asnmgttqdl hralsllsne ssvscepkqh gslaypvhvs gssmsqptmn
      421 visqsfpipy alsenwqmeq eqttqsqveg dnhlqefqil kvpydnsfys nqmn
//
LOCUS       XP_016693105             497 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase 17-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693105
VERSION     XP_016693105.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837616.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693105.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..497
                     /product="mitogen-activated protein kinase 17-like isoform
                     X1"
                     /calculated_mol_wt=56507
     Region          15..352
                     /region_name="STKc_TDY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TDY Mitogen-Activated Protein Kinases; cd07859"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,62,76,97..100,103,105..106,
                     142,144,146..147,149,159..160,163,178,180..183,185,224)
                     /site_type="active"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,76,97..100,103,106,144,
                     146..147,149,159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143364"
     Site            order(62,105,142,144,163,178,180..183,185,224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143364"
     Site            order(73,101..102,107,118,121,128,150..154,310,312,315)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143364"
     Site            159..185
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143364"
     CDS             1..497
                     /gene="LOC107909911"
                     /gene_synonym="MPK7"
                     /coded_by="XM_016837616.2:631..2124"
                     /db_xref="GeneID:107909911"
ORIGIN      
        1 mfgkdfftey geasqyeike vvgtgsygvv asaidthtge kvaikkiani fehtseatri
       61 lreikllrll rhpdivqikh imlppcqref kdifvvfelm esdlhhviki nddltpehhq
      121 fflyqllrgl kyvhtahvfh rdlkpknila nadcklklcd fglarvsftd vpsaifwtdy
      181 vatrwyrape lcgsfysnyt pavdiwsvgc ifaelitgkp lfpgknvvdq ldlvtdllgt
      241 psaetiarik nekarnylns lrkkkpipfs kkfpntdpla lkllerliaf dpndrpsaee
      301 aladpyfhgl anvdnepsmq pisklefefe rrklseddvr eliyreiley hpqmlqqhlk
      361 gkdqisfmyp sgvdryrqqf aclegqgkie rgillqrkht slprervcnd dtdrideskk
      421 rtvasagrat lqsptklqas vepeyvnqnv agpqkasgkp vqngrrlsks esisasrcvg
      481 virkpqgmhg evqklva
//
LOCUS       XP_016693106             477 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase 17-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693106
VERSION     XP_016693106.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837617.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693106.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="mitogen-activated protein kinase 17-like isoform
                     X2"
                     /calculated_mol_wt=54126
     Region          15..332
                     /region_name="STKc_TDY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TDY Mitogen-Activated Protein Kinases; cd07859"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,62,76,97..100,103,105..106,
                     142,144,146..147,149,159..160,163,178,204)
                     /site_type="active"
                     /db_xref="CDD:143364"
     Site            order(22..25,27..28,30,43,45,76,97..100,103,106,144,
                     146..147,149,159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143364"
     Site            order(73,101..102,107,118,121,128,150..154,290,292,295)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143364"
     CDS             1..477
                     /gene="LOC107909911"
                     /gene_synonym="MPK7"
                     /coded_by="XM_016837617.2:631..2064"
                     /db_xref="GeneID:107909911"
ORIGIN      
        1 mfgkdfftey geasqyeike vvgtgsygvv asaidthtge kvaikkiani fehtseatri
       61 lreikllrll rhpdivqikh imlppcqref kdifvvfelm esdlhhviki nddltpehhq
      121 fflyqllrgl kyvhtahvfh rdlkpknila nadcklklcd fglarvsftd vpsaifwtyt
      181 pavdiwsvgc ifaelitgkp lfpgknvvdq ldlvtdllgt psaetiarik nekarnylns
      241 lrkkkpipfs kkfpntdpla lkllerliaf dpndrpsaee aladpyfhgl anvdnepsmq
      301 pisklefefe rrklseddvr eliyreiley hpqmlqqhlk gkdqisfmyp sgvdryrqqf
      361 aclegqgkie rgillqrkht slprervcnd dtdrideskk rtvasagrat lqsptklqas
      421 vepeyvnqnv agpqkasgkp vqngrrlsks esisasrcvg virkpqgmhg evqklva
//
LOCUS       XP_040943819             590 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943819
VERSION     XP_040943819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087885.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..590
                     /product="pentatricopeptide repeat-containing protein
                     At1g71060, mitochondrial-like isoform X1"
                     /calculated_mol_wt=67830
     Region          202..229
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <203..>582
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          234..263
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          272..298
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          304..333
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          339..368
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          374..403
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          409..437
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          444..470
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          480..509
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          515..543
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..590
                     /gene="LOC107910028"
                     /gene_synonym="PPR3"
                     /coded_by="XM_041087885.1:199..1971"
                     /db_xref="GeneID:107910028"
ORIGIN      
        1 mrlkllkpll ysfdilqfvr vhldvgvvks ssrvikvgge psnmkmsllr flnflskthr
       61 kpiaaalftr slttyskqsi errifnrnsl pghetsfgys stlhriiyrs ihedltpkhl
      121 svehyeknpa etkleqdaar ictllsthsg shadklleda sikvspslvv evlkrlsnag
      181 vialsfftwa ekqkgfkynt esynalieal gkikqfklir slvnemksrk llnkdtfali
      241 srrhararkv eeaieaferm eefgfklets dfnrlldtlc ksrhvekank vfdkmkkrrf
      301 vpdiksytil legwgkehnl lrldevylem kydgfepdvv tygilisayc kakkydaaie
      361 lfhemeaknc kptphvyctl inglgsekrl sealefferf kscgftpeap tynslvgayc
      421 wsmriddafq videmrkhsa gpnsrtydii lhhlikarrt neayfrfqkm snepgceptv
      481 styeiivrmf cnedrvdlak qvwdqmkakg vlpgmhmysd litslchknk lgeackyfqe
      541 mldagirppa kmfsnlkqal ldegkndeal nlarkinklr gtplvvrdqk
//
LOCUS       XP_016693674             212 aa            linear   PLN 06-AUG-2024
DEFINITION  floral homeotic protein PMADS 2-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693674
VERSION     XP_016693674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..212
                     /product="floral homeotic protein PMADS 2-like isoform X1"
                     /calculated_mol_wt=24602
     Region          2..80
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,67..68,
                     71,74..75)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          83..164
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..212
                     /gene="LOC107910365"
                     /gene_synonym="MADS-12"
                     /coded_by="XM_016838185.2:81..719"
                     /db_xref="GeneID:107910365"
ORIGIN      
        1 mgrgkieikr ienssnrqvt yskrrngimk kakeitvlcd akvsliifas sgkmheycsp
       61 stklidildq yqktsgkklw dakhenlsne idrikkends mqielrhlkg editslpyke
      121 lmaledalen gltcvrakqm dvldmakknt kfleednkql nfivnqqqlt yenvrehmdh
      181 hgyhraarad fnsqmpfafr vqpmqpnlqe rm
//
LOCUS       XP_016693823             631 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 17-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693823
VERSION     XP_016693823.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838334.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693823.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..631
                     /product="NAC domain-containing protein 17-like isoform
                     X1"
                     /calculated_mol_wt=70688
     Region          21..147
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..631
                     /gene="LOC107910480"
                     /coded_by="XM_016838334.2:230..2125"
                     /db_xref="GeneID:107910480"
ORIGIN      
        1 mkvtatavtv dsgfgddqvw ppgfrfhptd eelvlyylkr kickkrlkld iiretdvyks
       61 dpeelpgksv lkngdrqwff fcprdrkypn garsnratih gywkatgkdr sitcnsrvvg
      121 ikktlvfyrg rapngertdw vmheytldee elkrcqnvkd yyalyklykk sgpgpkngeq
      181 ygapfkeeaw ddeeyssnpl dsitpvkppn evipddnvka nvqsesplsd ieefmkqfad
      241 epalpqpqay hshvlpqvvs aedtqstlld psprgvlfpe qltvlhgqas fefsespisq
      301 lllqeapevt pvtdhldqlp qlceedflei ddllgpepli sniekpvenk qfneldglse
      361 fdlyhdaamf lqdmgsidqg tvpflydnmi nqvsyqlepq snislmnqqy lshsnlnlid
      421 kqwqnqanan mmeqhlqpql nasggnmlnq mvyqsgpnin smdqqsvlhs svdqvdyhgq
      481 nqqlqmdqin galwthdqsg dvfipsgsnl gnasptsgfv nngpkqdqgn kndgsgggsw
      541 fssslwsfvd siptapasaa esplvnrale rmssfsklri hamntavngs asarrrsrnr
      601 gfffisilga lcavlwflig tvrvlgrsis s
//
LOCUS       XP_016693824             601 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 17-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693824
VERSION     XP_016693824.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693824.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..601
                     /product="NAC domain-containing protein 17-like isoform
                     X2"
                     /calculated_mol_wt=67200
     Region          21..147
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..601
                     /gene="LOC107910480"
                     /coded_by="XM_016838335.2:358..2163"
                     /db_xref="GeneID:107910480"
ORIGIN      
        1 mkvtatavtv dsgfgddqvw ppgfrfhptd eelvlyylkr kickkrlkld iiretdvyks
       61 dpeelpgksv lkngdrqwff fcprdrkypn garsnratih gywkatgkdr sitcnsrvvg
      121 ikktlvfyrg rapngertdw vmheytldee elkrcqnvkd yyalyklykk sgpgpkngeq
      181 ygapfkeeaw ddeeyssnpl dsitpvkppn evipddnvka nvqsesplsd ieefmkqfad
      241 epalpqpqay hshvlpqvvs aedtqstlld psprgvlfpe qltvlhgqas fefsespisq
      301 lllqeapevt pvtdhldqlp qlceedflei ddllgpepli sniekpvenk qfneldglse
      361 fdlyhdaamf lqdmgsidqg tvpflydnmi nqwqnqanan mmeqhlqpql nasggnmlnq
      421 mvyqsgpnin smdqqsvlhs svdqvdyhgq nqqlqmdqin galwthdqsg dvfipsgsnl
      481 gnasptsgfv nngpkqdqgn kndgsgggsw fssslwsfvd siptapasaa esplvnrale
      541 rmssfsklri hamntavngs asarrrsrnr gfffisilga lcavlwflig tvrvlgrsis
      601 s
//
LOCUS       XP_016694019             501 aa            linear   PLN 06-AUG-2024
DEFINITION  biotin carboxylase 1, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694019
VERSION     XP_016694019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838530.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..501
                     /product="biotin carboxylase 1, chloroplastic isoform X1"
                     /calculated_mol_wt=54851
     Region          36..486
                     /region_name="PRK08591"
                     /note="acetyl-CoA carboxylase biotin carboxylase subunit;
                     Validated"
                     /db_xref="CDD:236307"
     CDS             1..501
                     /gene="LOC107910621"
                     /gene_synonym="BC1"
                     /coded_by="XM_016838530.2:68..1573"
                     /db_xref="GeneID:107910621"
ORIGIN      
        1 mvgsrinfpr qkaqstqvrc kssrcggalg akcraekilv anrgeiavrv irtahemgip
       61 cvavystidk dalhvklade svcigeapss qsyllipnvl saaisrnctm lhpgygflse
      121 navfvemcrd hrinfigpnp dsirvmgdks taretmknag vptvpgsdgl lqsteeaikl
      181 aheigfpvmi kataggggrg mrlskepdef vkllqqakse aaaafgndgv ylekyiqnpr
      241 hiefqvladk ygnvvhfger dcsiqrrnqk lleeapspal tpelrkamgd aavaaaasig
      301 yigvgtvefl ldergsfyfm emntriqveh pvtemissvd lieeqirvam geklrykqed
      361 ivlrghsiec rinaedafkg frpgpgrits ylpsggpfvr mdshvysdyv vppsydsllg
      421 klivwaptre kaiermkral ddtvitgvpt tieyhklild iedfrngkvd tafipkheee
      481 laapqkmvva spakeltsat a
//
LOCUS       XP_016714301             555 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase 15-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016714301
VERSION     XP_016714301.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858812.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714301.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..555
                     /product="mitogen-activated protein kinase 15-like isoform
                     X1"
                     /calculated_mol_wt=63319
     Region          24..361
                     /region_name="STKc_TDY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TDY Mitogen-Activated Protein Kinases; cd07859"
                     /db_xref="CDD:143364"
     Site            order(31..34,36..37,39,52,54,71,85,106..109,112,114..115,
                     151,153,155..156,158,168..169,172,187,189..192,194,233)
                     /site_type="active"
                     /db_xref="CDD:143364"
     Site            order(31..34,36..37,39,52,54,85,106..109,112,115,153,
                     155..156,158,168..169)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143364"
     Site            order(71,114,151,153,172,187,189..192,194,233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143364"
     Site            order(82,110..111,116,127,130,137,159..163,319,321,324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143364"
     Site            168..194
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143364"
     CDS             1..555
                     /gene="LOC107927706"
                     /gene_synonym="MPK16; MPK4"
                     /coded_by="XM_016858812.2:748..2415"
                     /db_xref="GeneID:107927706"
ORIGIN      
        1 mqpdqrrksa advdffteyg egsryrieev igkgsygvvc saydthtgek vaikkindif
       61 ehvsdatril reikllrllr hpdiveikhi lfppsrrefk diyvvfelme sdlhqvikan
      121 ddltpehyqf flyqllrglk yihtanvfhr dlkpknilan adcklkicdf glarvafndt
      181 ptaifwtdyv atrwyrapel cgsffskytp aidiwsigci faelltgkpl fpgknvvhql
      241 dlmtdllgtp saeaiarvrn ekarrylssm rkkkpiplsh kfpnadplav lllermlafe
      301 pkdrpsaeea ladpyfkgla kverepsaqp vtkmefefer rritkedvre liyreileyh
      361 pkmlkeyleg septgfmyps avdhfkkqfa fleehygngt taaplerqha slprpcvlys
      421 dnsvqnstdv tdnlskcsik etekpqters fpipmsrlpp qvpqsiqaga arpgkvvgsv
      481 lrynncgava agealeqrrm arnpsvptqy tatncsyprr npvckddeen elqpkpqyma
      541 rkvaaaqggs rsqwy
//
LOCUS       XP_016714302             554 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase 15-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016714302
VERSION     XP_016714302.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858813.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714302.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..554
                     /product="mitogen-activated protein kinase 15-like isoform
                     X2"
                     /calculated_mol_wt=63248
     Region          24..361
                     /region_name="STKc_TDY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TDY Mitogen-Activated Protein Kinases; cd07859"
                     /db_xref="CDD:143364"
     Site            order(31..34,36..37,39,52,54,71,85,106..109,112,114..115,
                     151,153,155..156,158,168..169,172,187,189..192,194,233)
                     /site_type="active"
                     /db_xref="CDD:143364"
     Site            order(31..34,36..37,39,52,54,85,106..109,112,115,153,
                     155..156,158,168..169)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143364"
     Site            order(71,114,151,153,172,187,189..192,194,233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143364"
     Site            order(82,110..111,116,127,130,137,159..163,319,321,324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143364"
     Site            168..194
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143364"
     CDS             1..554
                     /gene="LOC107927706"
                     /gene_synonym="MPK16; MPK4"
                     /coded_by="XM_016858813.2:748..2412"
                     /db_xref="GeneID:107927706"
ORIGIN      
        1 mqpdqrrksa advdffteyg egsryrieev igkgsygvvc saydthtgek vaikkindif
       61 ehvsdatril reikllrllr hpdiveikhi lfppsrrefk diyvvfelme sdlhqvikan
      121 ddltpehyqf flyqllrglk yihtanvfhr dlkpknilan adcklkicdf glarvafndt
      181 ptaifwtdyv atrwyrapel cgsffskytp aidiwsigci faelltgkpl fpgknvvhql
      241 dlmtdllgtp saeaiarvrn ekarrylssm rkkkpiplsh kfpnadplav lllermlafe
      301 pkdrpsaeea ladpyfkgla kverepsaqp vtkmefefer rritkedvre liyreileyh
      361 pkmlkeyleg septgfmyps avdhfkkqfa fleehygngt taaplerqha slprpcvlys
      421 dnsvqnstdv tdnlskcsik etekpqters fpipmsrlpp qvpqsiqgaa rpgkvvgsvl
      481 rynncgavaa gealeqrrma rnpsvptqyt atncsyprrn pvckddeene lqpkpqymar
      541 kvaaaqggsr sqwy
//
LOCUS       XP_016719580             865 aa            linear   PLN 06-AUG-2024
DEFINITION  tuberculostearic acid methyltransferase UfaA1-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016719580
VERSION     XP_016719580.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864091.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719580.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..865
                     /product="tuberculostearic acid methyltransferase
                     UfaA1-like isoform X1"
                     /calculated_mol_wt=97957
     Region          1..418
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
     Region          570..843
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..865
                     /gene="LOC107932144"
                     /gene_synonym="CPA-FAS-3"
                     /coded_by="XM_016864091.2:144..2741"
                     /db_xref="GeneID:107932144"
ORIGIN      
        1 mkiavigggi sgvvsaytla kaganvvlye keeylgghsk tvhfdgvdld lgfmvfnrvt
       61 ypnmmelfes lgidmepsdm slsvslnegk gcewgsrngl salfaqksnl fnpyfwqmlr
      121 eilkfkndvi sylellennp didrnetlgq fikskgysdl fqkaylvpvc gsiwscpter
      181 vmdfsafsil sfcrnhhllq ifgrpqwmtv rwrshryvnk vreelesrgc qirtgcevhs
      241 vlsdaegctv lcgddshely qgcimavhap dalrllgnqa tydestvlga fqyvysdiyl
      301 hrdknlmpkn paawsawnfl gstdknvslt ywlnvlqnlg etslpflvtl npdytpkhtl
      361 lkwrtghpvp svaatkasle ldriqgkrgi wfcgaylgyg fhedglkagm iaangllgks
      421 cnilsnpkhm vpslmetgar lfvtrflshf istgcville eggtmftfeg tsnkcslktv
      481 ikvhsphfyw kvmteadlgl adsyingdfs fvdkkdglln lvmilianrd lissnsklsk
      541 krgwwtpllf tagltsakyf fkhvlrqntl tqarrnisrh ydlsndlfal fldetmtysc
      601 avfktededl kdaqhrkisl liekaridsk heileigcgw gslaievvkr tgckytgitl
      661 seeqlklaek rvkeaglqen irfqlcdyrq lpstykydri iscemieavg heymedffgc
      721 cesvladdgl lvlqfisipe eryneyrrss dfikeyifpg gclpslarit tamnaasklc
      781 vehveniglh yyqtlrywrk nflekqskih algfndkfir tweyyfdyca agfksntlgn
      841 yqvvfsrpgn vvalgnpykd fpsas
//
LOCUS       XP_016719582             684 aa            linear   PLN 06-AUG-2024
DEFINITION  tuberculostearic acid methyltransferase UfaA1-like isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016719582
VERSION     XP_016719582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864093.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..684
                     /product="tuberculostearic acid methyltransferase
                     UfaA1-like isoform X2"
                     /calculated_mol_wt=77756
     Region          <1..237
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
     Region          389..662
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..684
                     /gene="LOC107932144"
                     /gene_synonym="CPA-FAS-3"
                     /coded_by="XM_016864093.2:160..2214"
                     /db_xref="GeneID:107932144"
ORIGIN      
        1 mdfsafsils fcrnhhllqi fgrpqwmtvr wrshryvnkv reelesrgcq irtgcevhsv
       61 lsdaegctvl cgddshelyq gcimavhapd alrllgnqat ydestvlgaf qyvysdiylh
      121 rdknlmpknp aawsawnflg stdknvslty wlnvlqnlge tslpflvtln pdytpkhtll
      181 kwrtghpvps vaatkaslel driqgkrgiw fcgaylgygf hedglkagmi aangllgksc
      241 nilsnpkhmv pslmetgarl fvtrflshfi stgcvillee ggtmftfegt snkcslktvi
      301 kvhsphfywk vmteadlgla dsyingdfsf vdkkdgllnl vmilianrdl issnsklskk
      361 rgwwtpllft agltsakyff khvlrqntlt qarrnisrhy dlsndlfalf ldetmtysca
      421 vfktededlk daqhrkisll iekaridskh eileigcgwg slaievvkrt gckytgitls
      481 eeqlklaekr vkeaglqeni rfqlcdyrql pstykydrii scemieavgh eymedffgcc
      541 esvladdgll vlqfisipee ryneyrrssd fikeyifpgg clpslaritt amnaasklcv
      601 ehveniglhy yqtlrywrkn flekqskiha lgfndkfirt weyyfdycaa gfksntlgny
      661 qvvfsrpgnv valgnpykdf psas
//
LOCUS       XP_016719583             456 aa            linear   PLN 06-AUG-2024
DEFINITION  tuberculostearic acid methyltransferase UfaA1-like isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016719583
VERSION     XP_016719583.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864094.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..456
                     /product="tuberculostearic acid methyltransferase
                     UfaA1-like isoform X3"
                     /calculated_mol_wt=51946
     Region          161..434
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..456
                     /gene="LOC107932144"
                     /gene_synonym="CPA-FAS-3"
                     /coded_by="XM_016864094.2:169..1539"
                     /db_xref="GeneID:107932144"
ORIGIN      
        1 miaangllgk scnilsnpkh mvpslmetga rlfvtrflsh fistgcvill eeggtmftfe
       61 gtsnkcslkt vikvhsphfy wkvmteadlg ladsyingdf sfvdkkdgll nlvmilianr
      121 dlissnskls kkrgwwtpll ftagltsaky ffkhvlrqnt ltqarrnisr hydlsndlfa
      181 lfldetmtys cavfkteded lkdaqhrkis lliekarids kheileigcg wgslaievvk
      241 rtgckytgit lseeqlklae krvkeaglqe nirfqlcdyr qlpstykydr iiscemieav
      301 gheymedffg ccesvladdg llvlqfisip eeryneyrrs sdfikeyifp ggclpslari
      361 ttamnaaskl cvehvenigl hyyqtlrywr knflekqski halgfndkfi rtweyyfdyc
      421 aagfksntlg nyqvvfsrpg nvvalgnpyk dfpsas
//
LOCUS       XP_016724518             211 aa            linear   PLN 06-AUG-2024
DEFINITION  truncated transcription factor CAULIFLOWER A-like isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016724518
VERSION     XP_016724518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="truncated transcription factor CAULIFLOWER
                     A-like isoform X1"
                     /calculated_mol_wt=24679
     Region          2..73
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          87..168
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..211
                     /gene="LOC107936320"
                     /coded_by="XM_016869029.2:236..871"
                     /db_xref="GeneID:107936320"
ORIGIN      
        1 mgrgrvelkr ienkinrqvt fskrrsglfk kahelsvlcd aevalivfsh kwklyeystd
       61 scmekilery erhyyaerhl vatepesqge wsveyyrlka kvellqknhr hymgedldpl
      121 slkelqnleq qldtavkhir arknqllnes iselqrkeka ikeqnamlan qpvfacrskr
      181 grrqlhgnls ggyktmasth hplcchthip l
//
LOCUS       XP_016741829             715 aa            linear   PLN 06-AUG-2024
DEFINITION  probable boron transporter 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016741829
VERSION     XP_016741829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..715
                     /product="probable boron transporter 2 isoform X1"
                     /calculated_mol_wt=79198
     Region          <4..608
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..715
                     /gene="LOC107951334"
                     /coded_by="XM_016886340.2:1430..3577"
                     /db_xref="GeneID:107951334"
ORIGIN      
        1 meetfvpfrg ikndlkgrll cykqdwtggl sagirilapt tyiffasaip visfgeqler
       61 ntdgsltavq tlastalcgi ihslvggqpl lilgvaeptv lmytfmfnfa kdrkdlghkl
      121 flawtgwvcv wtalllfila ilgacsiinr ftrvagelfg lliamlfmqq airgiveefg
      181 iphrenpeqt alqaswrfgn gmfalvlsfg llltalksrk arswrygtgw lrgfvadygv
      241 plmvllwtav syipvndvpr giprrlfspn pwspgaysnw tvikemvnvp plyivgafip
      301 atmiavlyyf dhsvasqlaq qkefnlkkpp syhydllllg flvilcglig ippsngvipq
      361 spmhtkslat lkhqllhnkl vstarksisk nsslsqlyqs mqeaynemqt plvyqlpstl
      421 glkelkestv qlasstgnid apvdetifdv akeidellpv evkeqrfsnl lqalmvggcv
      481 aampllkkip tsvlwgyfaf maieslpgnq fwerilllft apgrrykvle dshatfveiv
      541 pfktiatftl fqtvyllvcf gitwipiagv lfpllimllv pvrqyllpkf fkgahlqdld
      601 aaeyeeapai aynmtfedqe rqatatnsdg leildeimtr srgeirrtqs pkvssttpss
      661 vgdikpsysp gvlqnayspr isqlrgktek glelkqtpsp gpstlgqssr asssi
//
LOCUS       XP_016741830             702 aa            linear   PLN 06-AUG-2024
DEFINITION  probable boron transporter 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016741830
VERSION     XP_016741830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..702
                     /product="probable boron transporter 2 isoform X2"
                     /calculated_mol_wt=77952
     Region          <4..595
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..702
                     /gene="LOC107951334"
                     /coded_by="XM_016886341.2:1340..3448"
                     /db_xref="GeneID:107951334"
ORIGIN      
        1 meetfvpfrg ikndlkgrll cykqdwtggl sagirilapt tyiffasaip visfgeqler
       61 ntalcgiihs lvggqpllil gvaeptvlmy tfmfnfakdr kdlghklfla wtgwvcvwta
      121 lllfilailg acsiinrftr vagelfglli amlfmqqair giveefgiph renpeqtalq
      181 aswrfgngmf alvlsfglll talksrkars wrygtgwlrg fvadygvplm vllwtavsyi
      241 pvndvprgip rrlfspnpws pgaysnwtvi kemvnvpply ivgafipatm iavlyyfdhs
      301 vasqlaqqke fnlkkppsyh ydllllgflv ilcgligipp sngvipqspm htkslatlkh
      361 qllhnklvst arksisknss lsqlyqsmqe aynemqtplv yqlpstlglk elkestvqla
      421 sstgnidapv detifdvake idellpvevk eqrfsnllqa lmvggcvaam pllkkiptsv
      481 lwgyfafmai eslpgnqfwe rilllftapg rrykvledsh atfveivpfk tiatftlfqt
      541 vyllvcfgit wipiagvlfp llimllvpvr qyllpkffkg ahlqdldaae yeeapaiayn
      601 mtfedqerqa tatnsdglei ldeimtrsrg eirrtqspkv ssttpssvgd ikpsyspgvl
      661 qnaysprisq lrgktekgle lkqtpspgps tlgqssrass si
//
LOCUS       XP_016694156             538 aa            linear   PLN 06-AUG-2024
DEFINITION  synaptotagmin-2 [Gossypium hirsutum].
ACCESSION   XP_016694156
VERSION     XP_016694156.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838667.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694156.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..538
                     /product="synaptotagmin-2"
                     /calculated_mol_wt=61302
     Region          2..>536
                     /region_name="COG5038"
                     /note="Ca2+-dependent lipid-binding protein, contains C2
                     domain [General function prediction only]"
                     /db_xref="CDD:227371"
     Region          60..248
                     /region_name="SMP_SYT"
                     /note="synaptotagmin-like mitochondrial-lipid-binding
                     protein (SMP) domain found in the synaptotagmin family,
                     mostly plants; cd21677"
                     /db_xref="CDD:439233"
     Site            order(85,88..89,93,97,120,125,146,152,154,156,172,174,178,
                     180,195,197,199,209,234,237..238,241,243..246)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:439233"
     CDS             1..538
                     /gene="LOC107910707"
                     /coded_by="XM_016838667.2:430..2046"
                     /db_xref="GeneID:107910707"
ORIGIN      
        1 mgvlssvmgv fgfgigtsvg ivigyymfiy flptdvkdpk irplveedsk tlqqllpeip
       61 lwvknpdfdr vdwlnkfiet mwpyldtaic ttakniakpi ideqipkyki qsvefetltl
      121 gtlpptfqgm kvyvtdekei imepslkwag npniiiavka fglkatvqvv dlqvfavpri
      181 tlkpllsvfp cfaniyvslm dkphvdfglk llgadvmaip glyrfvqeli kdqvanmylw
      241 pkalqvpimd ptqamkkpvg mldvkvvkam klrkkdflgk sdpyvklklt eeklsakktt
      301 vkqsnlnpew neefsfvvkd pntqaleiil ydweqvgkhd kmgmnvvplk dltpeepkvf
      361 tldllknmdp ndqqneksrg qlvleafykp fkedempkdv ddstmvqkap egtpagggll
      421 vvivheaedi egkyhtnphv rlsfrgeerk tkrvkksrdp rweeefqfmv depptndkih
      481 ieafstssri gllhpkeslg yvtisladvv nnrrineryh lidskngriq iemqwrts
//
LOCUS       XP_016694213             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694213
VERSION     XP_016694213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_016838724.2:421..2499"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_016694214             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694214
VERSION     XP_016694214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838725.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_016838725.2:346..2424"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_040943821             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943821
VERSION     XP_040943821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087887.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_041087887.1:336..2414"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_016694217             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694217
VERSION     XP_016694217.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838728.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_016838728.2:284..2362"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_040943822             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943822
VERSION     XP_040943822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087888.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_041087888.1:133..2211"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_016694215             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694215
VERSION     XP_016694215.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838726.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_016838726.2:231..2309"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_016694218             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694218
VERSION     XP_016694218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838729.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_016838729.2:124..2202"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_040943823             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943823
VERSION     XP_040943823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087889.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_041087889.1:584..2662"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_016694216             692 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694216
VERSION     XP_016694216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838727.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X1"
                     /calculated_mol_wt=75158
     Region          643..690
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(645,648,663,665,668,671,682,685)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..692
                     /gene="LOC107910749"
                     /coded_by="XM_016838727.2:148..2226"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql evepccvcqe eyndgedigt
      661 lecghgfhad cikqwlmhkn lcpickttgl tk
//
LOCUS       XP_016694219             684 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694219
VERSION     XP_016694219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838730.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..684
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X2"
                     /calculated_mol_wt=74296
     Region          641..682
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..684
                     /gene="LOC107910749"
                     /coded_by="XM_016838730.2:421..2475"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql eeeyndgedi gtlecghgfh
      661 adcikqwlmh knlcpicktt gltk
//
LOCUS       XP_040943824             684 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943824
VERSION     XP_040943824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087890.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..684
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X2"
                     /calculated_mol_wt=74296
     Region          641..682
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..684
                     /gene="LOC107910749"
                     /coded_by="XM_041087890.1:339..2393"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mqgqrgtvgs lpetffvhss tssnavaeqq dcwnnirnpi enrladclls tndmnigyan
       61 smgqeeqlgr wslvdvnssg tqnevshnew ktdhrwsssi sasanagprl egrryeqnsl
      121 faqssnsdtv sqnlrlnagf agvddnscqv terlnlhkss gseneqnllg tgpeafllss
      181 gsgryvvddn dsrpgcsyeg rrasckrkal egnvgqcsss essgyfrsae ssaghgisas
      241 ytagsnvnis ppsrqvhprl gldvrgsasn sipeqivlpp taesshrnfh lrrnpssiqe
      301 pithpifptg dmswqavvss aqqpsrlfpa nhslelrsap vvhnansenp nvishvpsll
      361 qnggsgprtg sssnsnpfad rdvprarhks rsmarnilhh pmfvpapelr tlvrnpilss
      421 gnisspgnva stshagsnng anvmsastwv phpnpssqyp rrlselvrqs lmsslgtesg
      481 gqsnhsslps gpttspeaml lsshvasqvp hrpyprsllw lerqdagfvg iphslrtlaa
      541 ategrsrlvv seirnvldlm rrgenlqfed vmildqsvil gvadihdrhr dmrldvdnms
      601 yeellaleer ignvstglse etilnrlerr khssapgaql eeeyndgedi gtlecghgfh
      661 adcikqwlmh knlcpicktt gltk
//
LOCUS       XP_040943825             639 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943825
VERSION     XP_040943825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087891.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..639
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X3"
                     /calculated_mol_wt=69323
     Region          590..637
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(592,595,610,612,615,618,629,632)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..639
                     /gene="LOC107910749"
                     /coded_by="XM_041087891.1:435..2354"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mnigyansmg qeeqlgrwsl vdvnssgtqn evshnewktd hrwsssisas anagprlegr
       61 ryeqnslfaq ssnsdtvsqn lrlnagfagv ddnscqvter lnlhkssgse neqnllgtgp
      121 eafllssgsg ryvvddndsr pgcsyegrra sckrkalegn vgqcsssess gyfrsaessa
      181 ghgisasyta gsnvnispps rqvhprlgld vrgsasnsip eqivlpptae sshrnfhlrr
      241 npssiqepit hpifptgdms wqavvssaqq psrlfpanhs lelrsapvvh nansenpnvi
      301 shvpsllqng gsgprtgsss nsnpfadrdv prarhksrsm arnilhhpmf vpapelrtlv
      361 rnpilssgni sspgnvasts hagsnnganv msastwvphp npssqyprrl selvrqslms
      421 slgtesggqs nhsslpsgpt tspeamllss hvasqvphrp yprsllwler qdagfvgiph
      481 slrtlaaate grsrlvvsei rnvldlmrrg enlqfedvmi ldqsvilgva dihdrhrdmr
      541 ldvdnmsyee llaleerign vstglseeti lnrlerrkhs sapgaqleve pccvcqeeyn
      601 dgedigtlec ghgfhadcik qwlmhknlcp ickttgltk
//
LOCUS       XP_040943827             631 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943827
VERSION     XP_040943827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087893.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..631
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X4"
                     /calculated_mol_wt=68461
     Region          588..629
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..631
                     /gene="LOC107910749"
                     /coded_by="XM_041087893.1:435..2330"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mnigyansmg qeeqlgrwsl vdvnssgtqn evshnewktd hrwsssisas anagprlegr
       61 ryeqnslfaq ssnsdtvsqn lrlnagfagv ddnscqvter lnlhkssgse neqnllgtgp
      121 eafllssgsg ryvvddndsr pgcsyegrra sckrkalegn vgqcsssess gyfrsaessa
      181 ghgisasyta gsnvnispps rqvhprlgld vrgsasnsip eqivlpptae sshrnfhlrr
      241 npssiqepit hpifptgdms wqavvssaqq psrlfpanhs lelrsapvvh nansenpnvi
      301 shvpsllqng gsgprtgsss nsnpfadrdv prarhksrsm arnilhhpmf vpapelrtlv
      361 rnpilssgni sspgnvasts hagsnnganv msastwvphp npssqyprrl selvrqslms
      421 slgtesggqs nhsslpsgpt tspeamllss hvasqvphrp yprsllwler qdagfvgiph
      481 slrtlaaate grsrlvvsei rnvldlmrrg enlqfedvmi ldqsvilgva dihdrhrdmr
      541 ldvdnmsyee llaleerign vstglseeti lnrlerrkhs sapgaqleee yndgedigtl
      601 ecghgfhadc ikqwlmhknl cpickttglt k
//
LOCUS       XP_040943828             631 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase RHG1A isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040943828
VERSION     XP_040943828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087894.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..631
                     /product="probable E3 ubiquitin-protein ligase RHG1A
                     isoform X4"
                     /calculated_mol_wt=68461
     Region          588..629
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..631
                     /gene="LOC107910749"
                     /coded_by="XM_041087894.1:400..2295"
                     /db_xref="GeneID:107910749"
ORIGIN      
        1 mnigyansmg qeeqlgrwsl vdvnssgtqn evshnewktd hrwsssisas anagprlegr
       61 ryeqnslfaq ssnsdtvsqn lrlnagfagv ddnscqvter lnlhkssgse neqnllgtgp
      121 eafllssgsg ryvvddndsr pgcsyegrra sckrkalegn vgqcsssess gyfrsaessa
      181 ghgisasyta gsnvnispps rqvhprlgld vrgsasnsip eqivlpptae sshrnfhlrr
      241 npssiqepit hpifptgdms wqavvssaqq psrlfpanhs lelrsapvvh nansenpnvi
      301 shvpsllqng gsgprtgsss nsnpfadrdv prarhksrsm arnilhhpmf vpapelrtlv
      361 rnpilssgni sspgnvasts hagsnnganv msastwvphp npssqyprrl selvrqslms
      421 slgtesggqs nhsslpsgpt tspeamllss hvasqvphrp yprsllwler qdagfvgiph
      481 slrtlaaate grsrlvvsei rnvldlmrrg enlqfedvmi ldqsvilgva dihdrhrdmr
      541 ldvdnmsyee llaleerign vstglseeti lnrlerrkhs sapgaqleee yndgedigtl
      601 ecghgfhadc ikqwlmhknl cpickttglt k
//
LOCUS       XP_016693995             515 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693995
VERSION     XP_016693995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..515
                     /product="probable protein phosphatase 2C 6 isoform X1"
                     /calculated_mol_wt=56496
     Region          75..394
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(85,89..90,111..113,339,385)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..515
                     /gene="LOC107910604"
                     /coded_by="XM_016838506.2:616..2163"
                     /db_xref="GeneID:107910604"
ORIGIN      
        1 mgscfssaan gksgnkrddq vtdastaitc aspkkqkqrq glgrwrkkss glvpmgeael
       61 hlipgrmfln gassvaclyt qqgkkgtnqd amlvwenfss rsdaifcgvf dghgpyghmv
      121 akkvrdslpv ilctqwkasl tgeqsclnks enapestmse daaslsmdde ccesweieen
      181 eqlpemylpl kqsmlkafkl mdkelklhpa igcfcsgtta vtlvkqgldl vignvgdsra
      241 vlamrdkdns liavqltvdl kpdlpreaar iqqcrgrvfa lqdepevarv wlpnndspgl
      301 amsrafgdfc lkdfglisvp difyrrlter defvilatdg vwdvlsnkea idivasapsh
      361 staaralvdc atrawrlkyp tsknddcavv clfleylpas ngtaeendit ripkecretm
      421 vaidenkgds htsslgqsda fhgsteivpv telteemlss kfpgqskrsl aecisvadde
      481 ewsalegitr vnsllslprf lsshkrstns rrkwl
//
LOCUS       XP_016693996             515 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693996
VERSION     XP_016693996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838507.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..515
                     /product="probable protein phosphatase 2C 6 isoform X1"
                     /calculated_mol_wt=56496
     Region          75..394
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(85,89..90,111..113,339,385)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..515
                     /gene="LOC107910604"
                     /coded_by="XM_016838507.2:346..1893"
                     /db_xref="GeneID:107910604"
ORIGIN      
        1 mgscfssaan gksgnkrddq vtdastaitc aspkkqkqrq glgrwrkkss glvpmgeael
       61 hlipgrmfln gassvaclyt qqgkkgtnqd amlvwenfss rsdaifcgvf dghgpyghmv
      121 akkvrdslpv ilctqwkasl tgeqsclnks enapestmse daaslsmdde ccesweieen
      181 eqlpemylpl kqsmlkafkl mdkelklhpa igcfcsgtta vtlvkqgldl vignvgdsra
      241 vlamrdkdns liavqltvdl kpdlpreaar iqqcrgrvfa lqdepevarv wlpnndspgl
      301 amsrafgdfc lkdfglisvp difyrrlter defvilatdg vwdvlsnkea idivasapsh
      361 staaralvdc atrawrlkyp tsknddcavv clfleylpas ngtaeendit ripkecretm
      421 vaidenkgds htsslgqsda fhgsteivpv telteemlss kfpgqskrsl aecisvadde
      481 ewsalegitr vnsllslprf lsshkrstns rrkwl
//
LOCUS       XP_040943829             461 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 66 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943829
VERSION     XP_040943829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087895.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..461
                     /product="probable protein phosphatase 2C 66 isoform X2"
                     /calculated_mol_wt=50788
     Region          21..340
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(31,35..36,57..59,285,331)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..461
                     /gene="LOC107910604"
                     /coded_by="XM_041087895.1:527..1912"
                     /db_xref="GeneID:107910604"
ORIGIN      
        1 mgeaelhlip grmflngass vaclytqqgk kgtnqdamlv wenfssrsda ifcgvfdghg
       61 pyghmvakkv rdslpvilct qwkasltgeq sclnksenap estmsedaas lsmddecces
      121 weieeneqlp emylplkqsm lkafklmdke lklhpaigcf csgttavtlv kqgldlvign
      181 vgdsravlam rdkdnsliav qltvdlkpdl preaariqqc rgrvfalqde pevarvwlpn
      241 ndspglamsr afgdfclkdf glisvpdify rrlterdefv ilatdgvwdv lsnkeaidiv
      301 asapshstaa ralvdcatra wrlkyptskn ddcavvclfl eylpasngta eenditripk
      361 ecretmvaid enkgdshtss lgqsdafhgs teivpvtelt eemlsskfpg qskrslaeci
      421 svaddeewsa legitrvnsl lslprflssh krstnsrrkw l
//
LOCUS       XP_016685719             241 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685719
VERSION     XP_016685719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..241
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26136
     CDS             1..241
                     /gene="LOC107903984"
                     /coded_by="XM_016830230.2:280..1005"
                     /db_xref="GeneID:107903984"
ORIGIN      
        1 mdsgncagkc kdnspklikn sdkvctdetn rviidpsatt rkgnkesslg pitpdanrgi
       61 gefpykfnsp ptelkkaqnh phfdpdttln qdsmvsvnhs sprtpkdgif dpfapgpecm
      121 vfapsyrkyv demritvarr lsfdipvgtv gsvnhrtaad sisdeemfes vyenlleviv
      181 snqaegfltg fsniecdsdg sktppsvpcl ngvsdtcpga pikltgrsrv idlgfcrkle
      241 f
//
LOCUS       XP_016685733             173 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016685733
VERSION     XP_016685733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="U11/U12 small nuclear ribonucleoprotein 25 kDa
                     protein isoform X1"
                     /calculated_mol_wt=19107
     Region          60..145
                     /region_name="Ubl_SNRNP25"
                     /note="ubiquitin-like (Ubl) domain found in small nuclear
                     ribonucleoprotein U11/U12 subunit 25 (SNRNP25) and similar
                     proteins; cd17058"
                     /db_xref="CDD:340578"
     CDS             1..173
                     /gene="LOC107904002"
                     /coded_by="XM_016830244.2:625..1146"
                     /db_xref="GeneID:107904002"
ORIGIN      
        1 mesgakeegk vlgynskkvk kvailstlaa llddpiladv pkkpslsdvd tlinlelgsa
       61 mcisifkldg tsfdvavmns atvkdlklai kkkvieleqs kmghrhiswr hvwanfclah
      121 hngkllddda alhdfgvrnn sqvhflpyvv skgsgrhskr rkhrffhgln kls
//
LOCUS       XP_016685738             173 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016685738
VERSION     XP_016685738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="U11/U12 small nuclear ribonucleoprotein 25 kDa
                     protein isoform X1"
                     /calculated_mol_wt=19107
     Region          60..145
                     /region_name="Ubl_SNRNP25"
                     /note="ubiquitin-like (Ubl) domain found in small nuclear
                     ribonucleoprotein U11/U12 subunit 25 (SNRNP25) and similar
                     proteins; cd17058"
                     /db_xref="CDD:340578"
     CDS             1..173
                     /gene="LOC107904002"
                     /coded_by="XM_016830249.2:604..1125"
                     /db_xref="GeneID:107904002"
ORIGIN      
        1 mesgakeegk vlgynskkvk kvailstlaa llddpiladv pkkpslsdvd tlinlelgsa
       61 mcisifkldg tsfdvavmns atvkdlklai kkkvieleqs kmghrhiswr hvwanfclah
      121 hngkllddda alhdfgvrnn sqvhflpyvv skgsgrhskr rkhrffhgln kls
//
LOCUS       XP_040943831             144 aa            linear   PLN 06-AUG-2024
DEFINITION  U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943831
VERSION     XP_040943831.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087897.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="U11/U12 small nuclear ribonucleoprotein 25 kDa
                     protein isoform X2"
                     /calculated_mol_wt=15619
     Region          60..142
                     /region_name="Ubl_SNRNP25"
                     /note="ubiquitin-like (Ubl) domain found in small nuclear
                     ribonucleoprotein U11/U12 subunit 25 (SNRNP25) and similar
                     proteins; cd17058"
                     /db_xref="CDD:340578"
     CDS             1..144
                     /gene="LOC107904002"
                     /coded_by="XM_041087897.1:588..1022"
                     /db_xref="GeneID:107904002"
ORIGIN      
        1 mesgakeegk vlgynskkvk kvailstlaa llddpiladv pkkpslsdvd tlinlelgsa
       61 mcisifkldg tsfdvavmns atvkdlklai kkkvieleqs kmghrhiswr hvwanfclah
      121 hngkllddda alhdfgvrnn sqgl
//
LOCUS       XP_016685706             442 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685706
VERSION     XP_016685706.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830217.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685706.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..442
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50900
     CDS             1..442
                     /gene="LOC107903976"
                     /coded_by="XM_016830217.2:277..1605"
                     /db_xref="GeneID:107903976"
ORIGIN      
        1 mastgglvpi traflasyye kypfdpltdd vsrlssqirs fiqdliqgfp ptqgeslliq
       61 eadsepphkm denmwknreh ieeilfller phwpsvlqqs staevaefat tlgqlkdkfq
      121 atlrilesfq srnservfnt vmtympqdfr gtlirqqker sernkqaevd alissggsir
      181 drysllwkqq mdrrrqlvql gsatgvyktl vkylvgvpqv lldfirqind ddgpmeeqrq
      241 rygpplyslt rmvlfihlfl slawqrfeaf klnrlqisvl eeavdvytte lqrfinfise
      301 vfanspffis aedasmlemg kndeykeitv pagksyevsl tvesinsyia wdfslvqgkl
      361 nmdigfsvey tnnggektli lpyrryesdq gnfstcmagn ykliwdnsys affkkallyk
      421 vdcippvlee sekgsernev ee
//
LOCUS       XP_040943832             756 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SCARECROW [Gossypium hirsutum].
ACCESSION   XP_040943832
VERSION     XP_040943832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087898.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..756
                     /product="protein SCARECROW"
                     /calculated_mol_wt=82636
     Region          392..743
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..756
                     /gene="LOC107960801"
                     /coded_by="XM_041087898.1:410..2680"
                     /db_xref="GeneID:107960801"
ORIGIN      
        1 mdasdlvden hsetngssss rghpvavann tsdgkmmrkr maseivdnqr fprrtlvsep
       61 epdnntvcsf lpapassnpl lnhstikmnt aifpsanfia vtsggpavls tttstftcid
      121 tistskphpp avcgfsglpl fpptdrnrns vtattasdsv iispisnsmd dtsatvwidg
      181 virdlihtss nvsisqiihn vreiiypcnp nlatlleyrl rslvdpverr skegeasllq
      241 rnhsqqqgss gltfnldpal dslpncslpe scsmsqylnw einppsvsnn avatqhqhhn
      301 qissspsatt ppvlslcqtl phhqqtreqq plpvpeenps pvekttpstt acttptstfq
      361 ivqacsardr keeirqqkrd eeglhlltll lqcaeavsan kfeeanrmll elsqlstpfg
      421 tsaqrvaayf seamsarlls sclgicatlp pipqsqshtq kivsafqvfn gispfvkfsh
      481 ftanqaiqea fereervhii dldimqglqw pglfhilasr pggpphvrlt glgtsleale
      541 atgkrlsdfa dklglpfqfc pvadkvgnle perlkvskte avavhwlqhs lydvtgsdtn
      601 alwllrrlap kvvtvveqdl rrqegpflgr fveaihyysa vfdslgasyg eeseerhvve
      661 qqllskeirn vlalgggsmk fhnwreklqq cgfkgislag naatqatlll gmfpshgytl
      721 vedngalklg wkdlclltas awrpgedtlp fqfhan
//
LOCUS       XP_016688608             418 aa            linear   PLN 06-AUG-2024
DEFINITION  ethanolamine-phosphate cytidylyltransferase [Gossypium hirsutum].
ACCESSION   XP_016688608
VERSION     XP_016688608.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016688608.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..418
                     /product="ethanolamine-phosphate cytidylyltransferase"
                     /calculated_mol_wt=46344
     Region          2..418
                     /region_name="PLN02406"
                     /note="ethanolamine-phosphate cytidylyltransferase"
                     /db_xref="CDD:215227"
     CDS             1..418
                     /gene="LOC107906190"
                     /coded_by="XM_016833119.2:230..1486"
                     /db_xref="GeneID:107906190"
ORIGIN      
        1 mnkissttli ggavvvamav glylgvakrg lppeglgmgl wrkikrkkkp lrvymdgcfd
       61 mmhyghcnal rqaravgdql vvgvvsdaei iankgppvtp mhermimvka vkwvdevisd
      121 apyaitedfm kklfdeykmd yiihgddpcv lpdgtdayav akkagrfkqi krtegisstd
      181 ivgrmllcvr ersvsdshnh sslqrqfshg hsqkfedggs gsrsgtrvsh flptsrrivq
      241 fsngkgpgpn ahivyidgaf dlfhaghvei lrvarelgdf llvgthndqt isakrgthrp
      301 imnlhersls vlacryvdev iigapwevsk dmittfnisl vvhgtvaess dfqkekdnpy
      361 dvpismgifk vlesplditt ttiikrivan hkayqkrnak kvasekryyd nktyvssd
//
LOCUS       XP_016685702             425 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL8 [Gossypium hirsutum].
ACCESSION   XP_016685702
VERSION     XP_016685702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..425
                     /product="probable serine/threonine-protein kinase PBL8"
                     /calculated_mol_wt=47017
     Region          83..357
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,110,112,141,157..160,164,166,207,209,
                     211..212,214,225,228,246..249)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(83..87,91,110,112,141,157..160,164,207,209,211..212,
                     214,225)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(87,164,166,207,209,211,228,246..249)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(224..231,242..249)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..425
                     /gene="LOC107903973"
                     /coded_by="XM_016830213.2:521..1798"
                     /db_xref="GeneID:107903973"
ORIGIN      
        1 mgncgtrees dvvthaqvqq lhnhivsdkk ltqsqsqtqn rtlsdlsdfe dsrknallyt
       61 hiiaftlfel etitksfrsd yilgeggfgt vykgyidenv rvglkslpva vkvlnkeglq
      121 ghrewltevn flgqlrhpnl vkligycced dhrllvyefm frgslenhlf rkatvplswa
      181 krmmialgaa kglaflhnae rpviyrdfkt snilldsdyt aklsdfglak agpqgdethv
      241 strvmgtygy aapeyvmtgh ltarsdvysf gvvllelltg rksvdktrps keqnlvdwar
      301 pklndkrkll qiidprlenq ysaraaqkac slayyclsqn pkarplmsdv vetleplqct
      361 ggsadevsss lnskvtggsa gpfamggvpd yrmrlrfsnn vgpgaicrsp npncspggpa
      421 acrvr
//
LOCUS       XP_016685681             466 aa            linear   PLN 06-AUG-2024
DEFINITION  RING finger and transmembrane domain-containing protein 2
            [Gossypium hirsutum].
ACCESSION   XP_016685681
VERSION     XP_016685681.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685681.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="RING finger and transmembrane domain-containing
                     protein 2"
                     /calculated_mol_wt=51645
     Region          <320..>443
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          403..443
                     /region_name="RING-HC_RNFT1-like"
                     /note="RING finger, HC subclass, found in RING finger and
                     transmembrane domain-containing protein RNFT1, RNFT2, and
                     similar proteins; cd16532"
                     /db_xref="CDD:438194"
     CDS             1..466
                     /gene="LOC107903957"
                     /coded_by="XM_016830192.2:386..1786"
                     /db_xref="GeneID:107903957"
ORIGIN      
        1 mdasgtdsda yggassnsrr hrilsasnii qaplsalley sgllrtsrsi hqesdplipn
       61 pnlenstsal annghvairi igtgdnhese rdasgmvagq lrevtsqnev flglgtsdgq
      121 ggnsrsselg vaagqgegvs hsssngsvsa daeagdgggg gsgvnnsrds syqrydiqqa
      181 arwieqvlpf sllllvvfir qhlqgffvti wiaavmfksn dilrkqtalk gerkisvltg
      241 icvaftlhvi avywwywndd llyplvmlpp kyippfwhai fiimvndtlv rqeamvlkcf
      301 llmyyknsrg rnyrkqgqml tlveymmlly rallptpvwy rfflnkdygs lfsslmtgly
      361 ltfkltsvve kvqsffaalk alsrkevhyg ayatseqvna agdlcaicqe kmhapillrc
      421 khifcedcvs ewferertcp lcralvkpad lrsygdgsts lffqif
//
LOCUS       XP_016685692             440 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685692
VERSION     XP_016685692.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685692.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..440
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48603
     CDS             1..440
                     /gene="LOC107903965"
                     /coded_by="XM_016830203.2:140..1462"
                     /db_xref="GeneID:107903965"
ORIGIN      
        1 mayrrrqgls ksstfkeeil hhlpdatsss spfdsgslaa palhassaar dtnspvlsnv
       61 eptrskgfna yedsindskg fwgvlarkak aildddnvsq dtetrgrvld astasqkqqs
      121 aesyrrmdhp airrgldrln tslnqigdsf ektfeegrti vegktqdiih etrklqirrk
      181 gnspmaqnqf tgfnstvqpp mqlqnqtnhd nqlkasrdva mataakakll lrelktvkad
      241 lafakercaq leeenkllre srekgdnpad ddlirlqlet llaekgrlah ensiyarenr
      301 flreiieyhq lsmqdvvyld egaeevapvg spinfplskm lsgdytpele vldpssspsk
      361 prirspspsp sqprirspsp slsqprirsp spspspcrqq piltkeissh lsqpaeeask
      421 gttpphasns ktnvpptsth
//
LOCUS       XP_016685669             527 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685669
VERSION     XP_016685669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830180.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..527
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58622
     Region          348..389
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(348,351,366,368,371,374,385,388)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..527
                     /gene="LOC107903949"
                     /coded_by="XM_016830180.2:363..1946"
                     /db_xref="GeneID:107903949"
ORIGIN      
        1 meedsernsq dvplpgtpgh meggglvgdh sglpalctlc rrslapeyea mpdletvglc
       61 gdckfllled lhtppqvynr rrqarrsrnr rsssesienl fsqqfshmit llrqnqstvs
      121 gsedqimdgg ssarslrrss srttpsssrr wrrvisdsds dgfdnldsff gesesnvsfg
      181 ryrlfrgesd avsfstyggd sdasmdghsf ldteifvqae rsdinsdtdt didpmnagln
      241 qwnwdepeed degdedgewe eadaeeyvvg htmsrtgvln lftssphesn lptfnfrrsr
      301 agfeqlldhl aetdgsrrga ppaslsfvnn lprvivsdeh eksdglacai ckdvlpvgae
      361 vnqlpclhvy hpscilpwls arnscplcry elptddkdye egkqhmnsrm rmheiqqqna
      421 sedsssensd eadadeacef gphqshdvph vdptigsssr eigrdwlfra aapiagiigv
      481 vlvfwlgkpl igrrgsipsw gqhqiqvsna sslnqrgsrg rrwwslf
//
LOCUS       XP_040943834             423 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PIN-LIKES 6 [Gossypium hirsutum].
ACCESSION   XP_040943834
VERSION     XP_040943834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087900.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="protein PIN-LIKES 6"
                     /calculated_mol_wt=45352
     Region          35..415
                     /region_name="Mem_trans"
                     /note="Membrane transport protein; pfam03547"
                     /db_xref="CDD:308904"
     CDS             1..423
                     /gene="LOC107903941"
                     /coded_by="XM_041087900.1:255..1526"
                     /db_xref="GeneID:107903941"
ORIGIN      
        1 mgrfllsslk eaavvaaatt aaaaggqsll gsikiavlpv akvftlcflg flmaskyvni
       61 fpangrklln glvftlllpc lifsqlgqai tlhkmlqwwf ipvnvflgav sgsiigyvvv
      121 tlvkppypyf kfsiiqiaig nignvplvli aalcrdtsnp fgdtetcstq gtayisfgqw
      181 vgaiilytyv fhmlapppeg tfdnedgnvp lkipqkdgsp envplleqea ssmdsnnsnk
      241 gkmksfllfv yeklklkqil qppiiasila mvigavpvlk kiiftrdapl yfftdsciil
      301 gkamipcill alggnlvdgp gpgssrigvr tlvaiiigrl ilvppaglgi vtladklgfl
      361 paddkmfrfv lllqhsmpts vlsgavanlr gygkeaaasl fwvhifavfs magwiilyln
      421 ilf
//
LOCUS       XP_016685647             739 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g37230 [Gossypium
            hirsutum].
ACCESSION   XP_016685647
VERSION     XP_016685647.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830158.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685647.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..739
                     /product="pentatricopeptide repeat-containing protein
                     At2g37230"
                     /calculated_mol_wt=83160
     Region          <154..>397
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          168..192
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          235..262
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          248..>688
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          270..297
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          303..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          338..367
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          374..402
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          411..438
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          454..481
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          486..515
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          521..550
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          556..585
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          628..652
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          658..687
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          693..720
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..739
                     /gene="LOC107903933"
                     /coded_by="XM_016830158.2:180..2399"
                     /db_xref="GeneID:107903933"
ORIGIN      
        1 maflsvskpy hlnlkpsris ihfhfftttq dptqdlnnap pqqqeqhvpn nrrtprgktr
       61 npekvediic rmmenrawtt rlqnsiralv pefdhalvyn vlhgaknsdh alqffrwver
      121 aglihhdrea hlkiiqilgr asklnharci lldmpkkgve wdedlfvvli dsygeagivq
      181 eavkifqkme elgvdrtiks fdaffkvilr rgrymmakry fnkmlsegih ptrhtyniml
      241 wgfflslrld tanrfyedmk trgispdavt yntmingytr fkrmeeaekl fvemkaknla
      301 ptvisyttmi kgyvaveqvd dglrlfeemk ssgikpnatt ystllpglcd agktteakti
      361 lkemveryia pkdnsifikl lnsqcksgdl naaadvlkam irlsipteag hygvlienfc
      421 kanefdraik lldklvekei vlrpensldi eanaynpliq ylchhgqtgk aevffrqlmk
      481 kgvldptafn nlirghakeg npglgfeilk imgrrgvpkd adaykllies ylrkgepada
      541 ktaldsmied gllpdsgifk svmeslfedg riqtasrvmk smvekgvkeh mdlvskilea
      601 llmrghveea lgriellmqn gcatnldsll silsekgkti aalklldfgl erdcsidvss
      661 yekvldallt agktlnaysi lckimekggi tnwssledli kslnqegnik qadilsrmik
      721 ggaaasgnkk gkkqatvas
//
LOCUS       XP_016685617             282 aa            linear   PLN 06-AUG-2024
DEFINITION  KH domain-containing protein At2g38610 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685617
VERSION     XP_016685617.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685617.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..282
                     /product="KH domain-containing protein At2g38610 isoform
                     X1"
                     /calculated_mol_wt=31541
     Region          22..73
                     /region_name="STAR_dimer"
                     /note="Homodimerization region of STAR domain protein;
                     pfam16544"
                     /db_xref="CDD:435414"
     Region          133..233
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     CDS             1..282
                     /gene="LOC107903918"
                     /coded_by="XM_016830128.2:317..1165"
                     /db_xref="GeneID:107903918"
ORIGIN      
        1 msglynhrfs pvrtasphir ntpdidsnql lsellaehqk lgpfmqilpt csrllnqeil
       61 rvsgmmsnqg fgdfdrmrhr spspmassni msnvsgtgls nwnslpqerl sgppgmtmdw
      121 qgapaspssy nvkrilrlei pvdtypnfnf vgrllgprgn slkrveattg crvyirgkgs
      181 ikdpdkeeql rgrsgyehln dplhiliead lpanfvdirl rqaqeiveel lkpvdesqdf
      241 ikrqqlrelt mlnsnfrees pgptgsvspf ncsgmkrpkt gr
//
LOCUS       XP_016685626             252 aa            linear   PLN 06-AUG-2024
DEFINITION  KH domain-containing protein At2g38610 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016685626
VERSION     XP_016685626.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685626.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="KH domain-containing protein At2g38610 isoform
                     X2"
                     /calculated_mol_wt=28184
     Region          22..73
                     /region_name="STAR_dimer"
                     /note="Homodimerization region of STAR domain protein;
                     pfam16544"
                     /db_xref="CDD:435414"
     Region          133..233
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     CDS             1..252
                     /gene="LOC107903918"
                     /coded_by="XM_016830137.2:181..939"
                     /db_xref="GeneID:107903918"
ORIGIN      
        1 msglynhrfs pvrtasphir ntpdidsnql lsellaehqk lgpfmqilpt csrllnqeil
       61 rvsgmmsnqg fgdfdrmrhr spspmassni msnvsgtgls nwnslpqerl sgppgmtmdw
      121 qgapaspssy nvkrilrlei pvdtypnfnf vgrllgprgn slkrveattg crvyirgkgs
      181 ikdpdkeeql rgrsgyehln dplhiliead lpanfvdirl rqaqeiveel lkpvgentsm
      241 swayytlgfm rs
//
LOCUS       XP_016685634             243 aa            linear   PLN 06-AUG-2024
DEFINITION  KH domain-containing protein At2g38610 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016685634
VERSION     XP_016685634.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830145.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685634.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="KH domain-containing protein At2g38610 isoform
                     X3"
                     /calculated_mol_wt=27221
     Region          22..73
                     /region_name="STAR_dimer"
                     /note="Homodimerization region of STAR domain protein;
                     pfam16544"
                     /db_xref="CDD:435414"
     Region          133..233
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     CDS             1..243
                     /gene="LOC107903918"
                     /coded_by="XM_016830145.2:181..912"
                     /db_xref="GeneID:107903918"
ORIGIN      
        1 msglynhrfs pvrtasphir ntpdidsnql lsellaehqk lgpfmqilpt csrllnqeil
       61 rvsgmmsnqg fgdfdrmrhr spspmassni msnvsgtgls nwnslpqerl sgppgmtmdw
      121 qgapaspssy nvkrilrlei pvdtypnfnf vgrllgprgn slkrveattg crvyirgkgs
      181 ikdpdkeeql rgrsgyehln dplhiliead lpanfvdirl rqaqeiveel lkpvqiirvk
      241 irl
//
LOCUS       XP_016685573             595 aa            linear   PLN 06-AUG-2024
DEFINITION  putative zinc transporter At3g08650 [Gossypium hirsutum].
ACCESSION   XP_016685573
VERSION     XP_016685573.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830084.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..595
                     /product="putative zinc transporter At3g08650"
                     /calculated_mol_wt=61977
     Region          91..316
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     Region          <389..541
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     CDS             1..595
                     /gene="LOC107903889"
                     /coded_by="XM_016830084.2:640..2427"
                     /db_xref="GeneID:107903889"
ORIGIN      
        1 mlfrvkhlfl slyfifvlle catadgqsei skgirsppnn vgnnvidgtg tekvisfkdd
       61 nnlmsnwkgs ysrvslstva lltlamaaat glgavpfffv eldpqwagic ngmaagvmla
      121 asfdliqegq ehgagswvvi gilaggvfil lckkfleqyg evsmldikga datkvvlvig
      181 imtlhsfgeg sgvgvsftgs kgftqgllvt laiavhnipe glavstvlas rgvspqnaml
      241 wsiitslpqp ivavpsfmca dtfnkflpfc tgfaagcmiw mvvaevlpda fkeasptpva
      301 saatlsvafm ealstlfqnf thdynsedas gffvsllfgl gpllgglvlv sfalafhlqh
      361 allmgtasgi afilgawrpl qlllsskmgf lplmllltvg aafvhvssst illlvgnkrs
      421 ssnnlptvtr fpvsvltlqs flacgavafh alaeglalgv aapkayglgr hmvlpvslhg
      481 lprgaavasc ifgttgswyg slaaaalisv igpisaigai lagidysgld hvmvlacggl
      541 ipcfvrivqr avrldirkss cglavgvgfa tlclactklv clhtpycnsa peavr
//
LOCUS       XP_016685576             595 aa            linear   PLN 06-AUG-2024
DEFINITION  putative zinc transporter At3g08650 [Gossypium hirsutum].
ACCESSION   XP_016685576
VERSION     XP_016685576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..595
                     /product="putative zinc transporter At3g08650"
                     /calculated_mol_wt=61977
     Region          91..316
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     Region          <389..541
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     CDS             1..595
                     /gene="LOC107903889"
                     /coded_by="XM_016830087.2:601..2388"
                     /db_xref="GeneID:107903889"
ORIGIN      
        1 mlfrvkhlfl slyfifvlle catadgqsei skgirsppnn vgnnvidgtg tekvisfkdd
       61 nnlmsnwkgs ysrvslstva lltlamaaat glgavpfffv eldpqwagic ngmaagvmla
      121 asfdliqegq ehgagswvvi gilaggvfil lckkfleqyg evsmldikga datkvvlvig
      181 imtlhsfgeg sgvgvsftgs kgftqgllvt laiavhnipe glavstvlas rgvspqnaml
      241 wsiitslpqp ivavpsfmca dtfnkflpfc tgfaagcmiw mvvaevlpda fkeasptpva
      301 saatlsvafm ealstlfqnf thdynsedas gffvsllfgl gpllgglvlv sfalafhlqh
      361 allmgtasgi afilgawrpl qlllsskmgf lplmllltvg aafvhvssst illlvgnkrs
      421 ssnnlptvtr fpvsvltlqs flacgavafh alaeglalgv aapkayglgr hmvlpvslhg
      481 lprgaavasc ifgttgswyg slaaaalisv igpisaigai lagidysgld hvmvlacggl
      541 ipcfvrivqr avrldirkss cglavgvgfa tlclactklv clhtpycnsa peavr
//
LOCUS       XP_016685559             595 aa            linear   PLN 06-AUG-2024
DEFINITION  putative zinc transporter At3g08650 [Gossypium hirsutum].
ACCESSION   XP_016685559
VERSION     XP_016685559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830070.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..595
                     /product="putative zinc transporter At3g08650"
                     /calculated_mol_wt=61977
     Region          91..316
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     Region          <389..541
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     CDS             1..595
                     /gene="LOC107903889"
                     /coded_by="XM_016830070.2:423..2210"
                     /db_xref="GeneID:107903889"
ORIGIN      
        1 mlfrvkhlfl slyfifvlle catadgqsei skgirsppnn vgnnvidgtg tekvisfkdd
       61 nnlmsnwkgs ysrvslstva lltlamaaat glgavpfffv eldpqwagic ngmaagvmla
      121 asfdliqegq ehgagswvvi gilaggvfil lckkfleqyg evsmldikga datkvvlvig
      181 imtlhsfgeg sgvgvsftgs kgftqgllvt laiavhnipe glavstvlas rgvspqnaml
      241 wsiitslpqp ivavpsfmca dtfnkflpfc tgfaagcmiw mvvaevlpda fkeasptpva
      301 saatlsvafm ealstlfqnf thdynsedas gffvsllfgl gpllgglvlv sfalafhlqh
      361 allmgtasgi afilgawrpl qlllsskmgf lplmllltvg aafvhvssst illlvgnkrs
      421 ssnnlptvtr fpvsvltlqs flacgavafh alaeglalgv aapkayglgr hmvlpvslhg
      481 lprgaavasc ifgttgswyg slaaaalisv igpisaigai lagidysgld hvmvlacggl
      541 ipcfvrivqr avrldirkss cglavgvgfa tlclactklv clhtpycnsa peavr
//
LOCUS       XP_016685564             595 aa            linear   PLN 06-AUG-2024
DEFINITION  putative zinc transporter At3g08650 [Gossypium hirsutum].
ACCESSION   XP_016685564
VERSION     XP_016685564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..595
                     /product="putative zinc transporter At3g08650"
                     /calculated_mol_wt=61977
     Region          91..316
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     Region          <389..541
                     /region_name="ZupT"
                     /note="Zinc transporter ZupT [Inorganic ion transport and
                     metabolism]; COG0428"
                     /db_xref="CDD:440197"
     CDS             1..595
                     /gene="LOC107903889"
                     /coded_by="XM_016830075.2:426..2213"
                     /db_xref="GeneID:107903889"
ORIGIN      
        1 mlfrvkhlfl slyfifvlle catadgqsei skgirsppnn vgnnvidgtg tekvisfkdd
       61 nnlmsnwkgs ysrvslstva lltlamaaat glgavpfffv eldpqwagic ngmaagvmla
      121 asfdliqegq ehgagswvvi gilaggvfil lckkfleqyg evsmldikga datkvvlvig
      181 imtlhsfgeg sgvgvsftgs kgftqgllvt laiavhnipe glavstvlas rgvspqnaml
      241 wsiitslpqp ivavpsfmca dtfnkflpfc tgfaagcmiw mvvaevlpda fkeasptpva
      301 saatlsvafm ealstlfqnf thdynsedas gffvsllfgl gpllgglvlv sfalafhlqh
      361 allmgtasgi afilgawrpl qlllsskmgf lplmllltvg aafvhvssst illlvgnkrs
      421 ssnnlptvtr fpvsvltlqs flacgavafh alaeglalgv aapkayglgr hmvlpvslhg
      481 lprgaavasc ifgttgswyg slaaaalisv igpisaigai lagidysgld hvmvlacggl
      541 ipcfvrivqr avrldirkss cglavgvgfa tlclactklv clhtpycnsa peavr
//
LOCUS       XP_016685590             341 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RETICULATA-RELATED 3, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016685590
VERSION     XP_016685590.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..341
                     /product="protein RETICULATA-RELATED 3, chloroplastic"
                     /calculated_mol_wt=36436
     Region          102..270
                     /region_name="RETICULATA-like"
                     /note="Protein RETICULATA-related; pfam11891"
                     /db_xref="CDD:432167"
     CDS             1..341
                     /gene="LOC107903898"
                     /coded_by="XM_016830101.2:520..1545"
                     /db_xref="GeneID:107903898"
ORIGIN      
        1 maamarysfs dltrkfpnts garplksqpp hvvsfprnqp frfqpsqisi pklqfscggg
       61 ddgnhgvggn ggggkgdggs nsnddlwqrf gilglllsgw rdrvaadpqf pfkvlmeelv
      121 gvsacvvgdm asrpnfglne ldfvfstlvv gsilnfllmy llaptasass sslpsifanc
      181 pqshmfepga ytlmnrfgtf vykgavfaav gfaaglvgta isnglimmrk kmdpsfetpn
      241 kppptllnaf twathmgvss nlryqtlngv efllakglpp lafkssvvvl rclnnvlggm
      301 tfvilakftg sqsveqkppn inkekksvdg dsldnsqstf k
//
LOCUS       XP_016685519             607 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At3g08570 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685519
VERSION     XP_016685519.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685519.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..607
                     /product="BTB/POZ domain-containing protein At3g08570
                     isoform X1"
                     /calculated_mol_wt=67590
     Region          32..131
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          206..463
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..607
                     /gene="LOC107903856"
                     /coded_by="XM_016830030.2:394..2217"
                     /db_xref="GeneID:107903856"
ORIGIN      
        1 mvsfsdntsl scpnnpsqap kfantfttri fsdvagdfti tvdgesfllh kfplvsrsgk
       61 irkmvadgkd ynvsklelvn fpggphtfel amkfcygmnf eitaanaall rcaaeylems
      121 edyreenlia rtevylndvv vqslekcvev lctcenlppi veelgiintc veaiamnack
      181 eqlvsglstl dcngestelk tgcmkwwied lsvlridyyh kvitsmarig vrpdsivesl
      241 mhyaqislks igkcqiwnpa rpnsnsgtte neqktiveal vnllptlkss nvplsflfgm
      301 lrmaimveat vacrlelerr iafrlemasl ddllipslra gdslfdidtv hrilvnflqq
      361 iedeenedsg gyesdglasl ghgsllkvgr lidsylaeia pdpylslqkf iamietlpdy
      421 srviddglyr aidiylkahp mlsdheckkl ckfidcqkls qeatnhaaqn erlpvqmaik
      481 vlyfeqlrlk nalcgsnddg flsqkissgv psaamsprdn yaslrrenre lkleisrmrv
      541 rlselekeqv vmkrgmmeks gngktfftsl skgigrigif sgpgggkrrk prgsegksgr
      601 srrysvs
//
LOCUS       XP_016685527             568 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At3g08570 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016685527
VERSION     XP_016685527.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685527.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..568
                     /product="BTB/POZ domain-containing protein At3g08570
                     isoform X2"
                     /calculated_mol_wt=63448
     Region          <14..92
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          167..424
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..568
                     /gene="LOC107903856"
                     /coded_by="XM_016830038.2:155..1861"
                     /db_xref="GeneID:107903856"
ORIGIN      
        1 mlqgtsplll menpfyfisg kirkmvadgk dynvsklelv nfpggphtfe lamkfcygmn
       61 feitaanaal lrcaaeylem sedyreenli artevylndv vvqslekcve vlctcenlpp
      121 iveelgiint cveaiamnac keqlvsglst ldcngestel ktgcmkwwie dlsvlridyy
      181 hkvitsmari gvrpdsives lmhyaqislk sigkcqiwnp arpnsnsgtt eneqktivea
      241 lvnllptlks snvplsflfg mlrmaimvea tvacrleler riafrlemas lddllipslr
      301 agdslfdidt vhrilvnflq qiedeeneds ggyesdglas lghgsllkvg rlidsylaei
      361 apdpylslqk fiamietlpd ysrviddgly raidiylkah pmlsdheckk lckfidcqkl
      421 sqeatnhaaq nerlpvqmai kvlyfeqlrl knalcgsndd gflsqkissg vpsaamsprd
      481 nyaslrrenr elkleisrmr vrlselekeq vvmkrgmmek sgngktffts lskgigrigi
      541 fsgpgggkrr kprgsegksg rsrrysvs
//
LOCUS       XP_016685535             516 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At3g08570 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016685535
VERSION     XP_016685535.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685535.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="BTB/POZ domain-containing protein At3g08570
                     isoform X3"
                     /calculated_mol_wt=57650
     Region          <1..40
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          115..372
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..516
                     /gene="LOC107903856"
                     /coded_by="XM_016830046.2:179..1729"
                     /db_xref="GeneID:107903856"
ORIGIN      
        1 mkfcygmnfe itaanaallr caaeylemse dyreenliar tevylndvvv qslekcvevl
       61 ctcenlppiv eelgiintcv eaiamnacke qlvsglstld cngestelkt gcmkwwiedl
      121 svlridyyhk vitsmarigv rpdsiveslm hyaqislksi gkcqiwnpar pnsnsgtten
      181 eqktivealv nllptlkssn vplsflfgml rmaimveatv acrlelerri afrlemasld
      241 dllipslrag dslfdidtvh rilvnflqqi edeenedsgg yesdglaslg hgsllkvgrl
      301 idsylaeiap dpylslqkfi amietlpdys rviddglyra idiylkahpm lsdheckklc
      361 kfidcqklsq eatnhaaqne rlpvqmaikv lyfeqlrlkn alcgsnddgf lsqkissgvp
      421 saamsprdny aslrrenrel kleisrmrvr lselekeqvv mkrgmmeksg ngktfftsls
      481 kgigrigifs gpgggkrrkp rgsegksgrs rrysvs
//
LOCUS       XP_016685543             232 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit E-like [Gossypium hirsutum].
ACCESSION   XP_016685543
VERSION     XP_016685543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..232
                     /product="V-type proton ATPase subunit E-like"
                     /calculated_mol_wt=26504
     Region          16..226
                     /region_name="vATP-synt_E"
                     /note="ATP synthase (E/31 kDa) subunit; pfam01991"
                     /db_xref="CDD:396537"
     CDS             1..232
                     /gene="LOC107903874"
                     /coded_by="XM_016830054.2:355..1053"
                     /db_xref="GeneID:107903874"
ORIGIN      
        1 mndgdvskqi qqmvrfirqe aeekaneisv saeeefniek lqiveaerrk ikqeyerkak
       61 qveirkkiey smqlnasrik vlqgqeelvn sikesarkel qrlgtdkrgy knlvkalvvq
      121 slvrlrepsv llrcrevdrk lvetiideak reyaekfnvp ppkividsvy lpppppangd
      181 efahqpycsg gvvlasedgk ivlentldar levafkqklp eirrrlvgql ga
//
LOCUS       XP_016685509             253 aa            linear   PLN 06-AUG-2024
DEFINITION  acid phosphatase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016685509
VERSION     XP_016685509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830020.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="acid phosphatase 1 isoform X1"
                     /calculated_mol_wt=28737
     Region          40..253
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(106..110,166..167,208,227..228,231..232)
                     /site_type="active"
                     /db_xref="CDD:319837"
     CDS             1..253
                     /gene="LOC107903841"
                     /coded_by="XM_016830020.2:92..853"
                     /db_xref="GeneID:107903841"
ORIGIN      
        1 makrvneiii fvfvalfska igakpywrtr wpidrvstec ltwqlavean nvrgwrivpa
       61 hclshieaym tggqyeqdvd yiveqiesyv selvvgedgm dawildiddt clsnviyykk
      121 kkygcepydp mafkawamkg ecpaipgvlg lfsklvkngf kvflitgrde etlapstian
      181 lhdqgfigye rltfrspayk gksavvykse irkqimeegy riwgnvgdqw tdlqgdclgn
      241 rtfklpnpmy cvp
//
LOCUS       XP_040943837             253 aa            linear   PLN 06-AUG-2024
DEFINITION  acid phosphatase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943837
VERSION     XP_040943837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087903.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="acid phosphatase 1 isoform X1"
                     /calculated_mol_wt=28737
     Region          40..253
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(106..110,166..167,208,227..228,231..232)
                     /site_type="active"
                     /db_xref="CDD:319837"
     CDS             1..253
                     /gene="LOC107903841"
                     /coded_by="XM_041087903.1:148..909"
                     /db_xref="GeneID:107903841"
ORIGIN      
        1 makrvneiii fvfvalfska igakpywrtr wpidrvstec ltwqlavean nvrgwrivpa
       61 hclshieaym tggqyeqdvd yiveqiesyv selvvgedgm dawildiddt clsnviyykk
      121 kkygcepydp mafkawamkg ecpaipgvlg lfsklvkngf kvflitgrde etlapstian
      181 lhdqgfigye rltfrspayk gksavvykse irkqimeegy riwgnvgdqw tdlqgdclgn
      241 rtfklpnpmy cvp
//
LOCUS       XP_040943838             253 aa            linear   PLN 06-AUG-2024
DEFINITION  acid phosphatase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943838
VERSION     XP_040943838.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087904.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="acid phosphatase 1 isoform X1"
                     /calculated_mol_wt=28737
     Region          40..253
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(106..110,166..167,208,227..228,231..232)
                     /site_type="active"
                     /db_xref="CDD:319837"
     CDS             1..253
                     /gene="LOC107903841"
                     /coded_by="XM_041087904.1:131..892"
                     /db_xref="GeneID:107903841"
ORIGIN      
        1 makrvneiii fvfvalfska igakpywrtr wpidrvstec ltwqlavean nvrgwrivpa
       61 hclshieaym tggqyeqdvd yiveqiesyv selvvgedgm dawildiddt clsnviyykk
      121 kkygcepydp mafkawamkg ecpaipgvlg lfsklvkngf kvflitgrde etlapstian
      181 lhdqgfigye rltfrspayk gksavvykse irkqimeegy riwgnvgdqw tdlqgdclgn
      241 rtfklpnpmy cvp
//
LOCUS       XP_016685501             261 aa            linear   PLN 06-AUG-2024
DEFINITION  acid phosphatase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016685501
VERSION     XP_016685501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830012.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..261
                     /product="acid phosphatase 1 isoform X2"
                     /calculated_mol_wt=29609
     Region          48..261
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(114..118,174..175,216,235..236,239..240)
                     /site_type="active"
                     /db_xref="CDD:319837"
     CDS             1..261
                     /gene="LOC107903841"
                     /coded_by="XM_016830012.2:242..1027"
                     /db_xref="GeneID:107903841"
ORIGIN      
        1 melraisama krvneiiifv fvalfskaig akpywrtrwp idrvsteclt wqlaveannv
       61 rgwrivpahc lshieaymtg gqyeqdvdyi veqiesyvse lvvgedgmda wildiddtcl
      121 snviyykkkk ygcepydpma fkawamkgec paipgvlglf sklvkngfkv flitgrdeet
      181 lapstianlh dqgfigyerl tfrspaykgk savvykseir kqimeegyri wgnvgdqwtd
      241 lqgdclgnrt fklpnpmycv p
//
LOCUS       XP_016685495             590 aa            linear   PLN 06-AUG-2024
DEFINITION  sialidase [Gossypium hirsutum].
ACCESSION   XP_016685495
VERSION     XP_016685495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016830006.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..590
                     /product="sialidase"
                     /calculated_mol_wt=63309
     Region          <195..400
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..590
                     /gene="LOC107903831"
                     /coded_by="XM_016830006.2:239..2011"
                     /db_xref="GeneID:107903831"
ORIGIN      
        1 mmnrnlrdss qslfgtarnn isahhhhrrr qslngglpfh kgsddnldlf sknrrsfsva
       61 ssdefsdvkl grlslgsakv nggiddllss tdggkhdydw lltppgtpff pssegsesqs
      121 atvsvaprsn skvrsvsttk asrlsvsqpe nnhsvrpars ssvtrssvss ysnyssnrgt
      181 silntssasv ssytrpsspi trssytrpss pitrspstar psapsprpts lpstpakirs
      241 spngsyidks wpsqssrpst ptsrpqihan lnstavrsns rpstpmrlnp mlsseagasp
      301 stgrtvsngh sagpasrpss pgprvrpsqq pvvppdfplg tpanlrttlp drpvsagrsr
      361 pvssvtmkan qdttgsvntp rrhsspvvtr grlaepngrt rvhsnghpsd ihesrknapv
      421 sdstmrrhlk sstttadgpg fgrtiskksl dsairhmdir ngttsirsls sttlfpqsir
      481 sataktqalr slsasdsdns ngspgrlknr dlpenrnsin raaecgsdfh dgrysaklse
      541 vdiyessryd villkedlkn tnwlhsiddk sdlvsisdgf eplpepfgll
//
LOCUS       XP_040943839             491 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STN8, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943839
VERSION     XP_040943839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087905.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="serine/threonine-protein kinase STN8,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=54707
     Region          133..475
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(135..138,141,143,180,182,220,240..243,306,310..311,
                     313,323..324)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..491
                     /gene="LOC107903804"
                     /coded_by="XM_041087905.1:102..1577"
                     /db_xref="GeneID:107903804"
ORIGIN      
        1 masllcptsa tvqqnhrvlc fsplksisqv nhlsltkrhk nttarcnafd llqqslsqfp
       61 vvksefesat gelnevqkwg fivfagltwi yltarpgvlv gaidayllap lqlgldslig
      121 rrslkrsdfl vgdklgegsf givysgvivp knasledrlp krgkakkalv dddrfkekvi
      181 lkklqvkvgv qgaeecgdye ewfnyrlsra apetcaeflg sfvadqtnsq fvkggkwlvw
      241 kfegdrtlad ymkdrsfpln iesvmfgrvl qgvesvkrna liikqilrqi itslkkihdt
      301 givhrdvkpa nivvtkrgqi klidfgaatd lrigknyvpn rglldpdycp pelyvlpeet
      361 pspppepiaa llspilwqln spdlfdmysa givllqmaip slrspaylkn fnseikavqy
      421 dlnkwrdrtr lrpdftildl esgrgwdlat klisergslr rgrlsaaaal rhpyfllggd
      481 qaaavlskfg f
//
LOCUS       XP_016685465             489 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STN8, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016685465
VERSION     XP_016685465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829976.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..489
                     /product="serine/threonine-protein kinase STN8,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=54465
     Region          133..473
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(135..138,141,143,180,182,218,238..241,304,308..309,
                     311,321..322)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..489
                     /gene="LOC107903804"
                     /coded_by="XM_016829976.2:127..1596"
                     /db_xref="GeneID:107903804"
ORIGIN      
        1 masllcptsa tvqqnhrvlc fsplksisqv nhlsltkrhk nttarcnafd llqqslsqfp
       61 vvksefesat gelnevqkwg fivfagltwi yltarpgvlv gaidayllap lqlgldslig
      121 rrslkrsdfl vgdklgegsf givysgvivp knasledrlp krgkakkalv dddrfkekvi
      181 lkkvkvgvqg aeecgdyeew fnyrlsraap etcaeflgsf vadqtnsqfv kggkwlvwkf
      241 egdrtladym kdrsfplnie svmfgrvlqg vesvkrnali ikqilrqiit slkkihdtgi
      301 vhrdvkpani vvtkrgqikl idfgaatdlr igknyvpnrg lldpdycppe lyvlpeetps
      361 pppepiaall spilwqlnsp dlfdmysagi vllqmaipsl rspaylknfn seikavqydl
      421 nkwrdrtrlr pdftildles grgwdlatkl isergslrrg rlsaaaalrh pyfllggdqa
      481 aavlskfgf
//
LOCUS       XP_016685484             148 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 28 [Gossypium hirsutum].
ACCESSION   XP_016685484
VERSION     XP_016685484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829995.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..148
                     /product="ubiquitin-conjugating enzyme E2 28"
                     /calculated_mol_wt=16391
     Region          3..145
                     /region_name="UBCc_UBE2D"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; cd23792"
                     /db_xref="CDD:467412"
     CDS             1..148
                     /gene="LOC107903823"
                     /coded_by="XM_016829995.2:1362..1808"
                     /db_xref="GeneID:107903823"
ORIGIN      
        1 maskrilkel kdlqkdppts csagpvaedm fhwqatimgp sdspyaggvf lvtihfppdy
       61 pfkppkvtfr tkvfhpnins ngsicldilk eqwspaltis kvllsicsll tdpnpddplv
      121 peiahmyktd rakyeatars wtqkyamg
//
LOCUS       XP_016685475             148 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 28 [Gossypium hirsutum].
ACCESSION   XP_016685475
VERSION     XP_016685475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829986.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..148
                     /product="ubiquitin-conjugating enzyme E2 28"
                     /calculated_mol_wt=16375
     Region          3..145
                     /region_name="UBCc_UBE2D"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; cd23792"
                     /db_xref="CDD:467412"
     CDS             1..148
                     /gene="LOC107903813"
                     /coded_by="XM_016829986.2:593..1039"
                     /db_xref="GeneID:107903813"
ORIGIN      
        1 maskrilkel kdlqkdppts csagpvaedm fhwqatimgp sdspyagglf lvtihfppdy
       61 pfkppkvafr tkvfhpnins ngsicldilk eqwspaltis kvllsicsll tdpnpddplv
      121 peiahmyktd rakyeatars wtqkyamg
//
LOCUS       XP_016685457             329 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685457
VERSION     XP_016685457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829968.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..329
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=36503
     Region          110..265
                     /region_name="YrrD"
                     /note="Uncharacterized conserved protein YrrD, contains
                     PRC-barrel domain [Function unknown]; COG3881"
                     /db_xref="CDD:443089"
     CDS             1..329
                     /gene="LOC107903790"
                     /coded_by="XM_016829968.2:91..1080"
                     /db_xref="GeneID:107903790"
ORIGIN      
        1 mcncvplspf sssiikirnp llknpqisdt hlpiitnngr lqflgccmka tpspsssveg
       61 dgygqlefdd delelkrrrt datlekisdk elkgkkgnkn gdklvsrkql mkrsnmvakq
      121 visiqsaqtl gfvsqlwvdt tswlvlamev rpsllagese rillqdinkv gdvvlveder
      181 vmdndfkmvr letlvgyrvv tpryrnigkv rgytfninsg avesleldaf gisiipsslv
      241 styallvedv leviadrvvv heaaasrlqr ltkrsmpfga sstqqippsc nkipmnmhle
      301 yslahtvank qlsgarlisl qfstirtmy
//
LOCUS       XP_016685449             333 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685449
VERSION     XP_016685449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=37336
     Region          110..265
                     /region_name="YrrD"
                     /note="Uncharacterized conserved protein YrrD, contains
                     PRC-barrel domain [Function unknown]; COG3881"
                     /db_xref="CDD:443089"
     CDS             1..333
                     /gene="LOC107903790"
                     /coded_by="XM_016829960.2:101..1102"
                     /db_xref="GeneID:107903790"
ORIGIN      
        1 mcncvplspf sssiikirnp llknpqisdt hlpiitnngr lqflgccmka tpspsssveg
       61 dgygqlefdd delelkrrrt datlekisdk elkgkkgnkn gdklvsrkql mkrsnmvakq
      121 visiqsaqtl gfvsqlwvdt tswlvlamev rpsllagese rillqdinkv gdvvlveder
      181 vmdndfkmvr letlvgyrvv tpryrnigkv rgytfninsg avesleldaf gisiipsslv
      241 styallvedv leviadrvvv heaaasrlqr ltkgfwdaqs sevslderie yggdegsegf
      301 rdgrrsrrrs rgrkprsksr eadddwelpm dyf
//
LOCUS       XP_016685425             190 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685425
VERSION     XP_016685425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=22036
     CDS             1..190
                     /gene="LOC107903768"
                     /coded_by="XM_016829936.2:136..708"
                     /db_xref="GeneID:107903768"
ORIGIN      
        1 matahlrlsq rmplhplnnt atvtatdsvl vsnpkqqyri lhsdernlln hqhpdtatat
       61 ekmettaldl nsslaeelna vrmkterlrl dkektekmlk ereallllqm keikergqiq
      121 rhleiqvdrl frlkelksys vrisplkslr ekqrsgwnmn evhslelkey esrdenplqa
      181 stpsnssqrf
//
LOCUS       XP_016685437             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685437
VERSION     XP_016685437.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829948.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..176
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=20422
     CDS             1..176
                     /gene="LOC107903768"
                     /coded_by="XM_016829948.2:100..630"
                     /db_xref="GeneID:107903768"
ORIGIN      
        1 matahlrlsq rmplhplnnt atvtatdsvl vsnpkqqyri lhsdernlln hqhpdtatat
       61 ekmettaldl nsslaeelna vrmkterlrl dkektekmlk ereallllqm keikergqiq
      121 rhleiqvdrl frlkelksys vrisplkslr ekqrsgwnmn evhslrfiys aeslnv
//
LOCUS       XP_016685404             330 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription elongation factor TFIIS [Gossypium hirsutum].
ACCESSION   XP_016685404
VERSION     XP_016685404.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685404.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..330
                     /product="transcription elongation factor TFIIS"
                     /calculated_mol_wt=37086
     Region          31..324
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     CDS             1..330
                     /gene="LOC107903762"
                     /coded_by="XM_016829915.2:169..1161"
                     /db_xref="GeneID:107903762"
ORIGIN      
        1 meralvelfd aarkaadlaa aaafdavssk gpevsrcvda lnqlktfpvt ydilvstqve
       61 rklrpltkhp tekihrmasd llelwkkivi keaskgkkng tasavkvekk eadgntamae
      121 kinlgetgki kkiyidgktk aksapklmtl vkcndplrdk freilveals kvpsetdedm
      181 ldqvnacdpi wvavtvesvm frkmgksngt nkikyrsimf nmndpknpdl rrkvllgevn
      241 perlitmtpe emaseqrqre nkeikekals ycerdaapka ttdqfkcgrc gkretsfyqm
      301 qtrsadeprt tyvtcvncnn hwefisavkm
//
LOCUS       XP_016685394            1189 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipid-transporting ATPase 1 [Gossypium hirsutum].
ACCESSION   XP_016685394
VERSION     XP_016685394.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685394.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1189
                     /product="phospholipid-transporting ATPase 1"
                     /calculated_mol_wt=135073
     Region          3..1171
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(440..442,601,624..626,693,740..742,870,873,876,896,
                     899)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1189
                     /gene="LOC107903751"
                     /coded_by="XM_016829905.2:885..4454"
                     /db_xref="GeneID:107903751"
ORIGIN      
        1 melhnndhty tsfdisrnss qaqenlsksr rirnksvdfd dnlpysenpr liyindprrt
       61 ndkyeftgne irtskytlit flpknlfiqf hrvaylyfla iaalnqlppl avfgrtvslf
      121 pllfvlcvta ikdgyedwrr hrsdrnennr ealvlqvgef qmkkwkkira gevvkihade
      181 tipcdmvllg tsdpsglayi qtmnldgesn lktryarqet assifegcnv sglirceqpn
      241 rniyeftanm efnghkfpls qsnivlrgcq lkntdwiigv vvyagqetka mlnsavspsk
      301 rsklegymnr etfwlsifll vmcsvvavgm glwlhrqkde ldtlpyyrkt yiregrengk
      361 tyryygipme tffsflssvi vfqimipisl yitmelvrlg qsyfmiedkh mycsnsgsrf
      421 qcrslnined lgqiryvfsd ktgtltenkm efrkasvygk dyrssnltdd svqdnsitda
      481 avpsrwklks eisvdselmd llhkdlagde riaahlfflt laacntvipi vsqdassshg
      541 ssdswgeika idyqgespde qalvsaasay gytlhertsg hividingdk lrldvlglhe
      601 fdsvrkrmsv virfpdntvk vlvkgadstm fsiladtekv dqirqatrsh lteysseglr
      661 tlvvaardlt daeleqwqcr yedastslid raaklrqtaa lvecnlkllg ataiedklqd
      721 gvpeaieslr qagikvwvlt gdkqetaisi glscklltad mqqiiingns eeecrnlltd
      781 amtrhgvqpa nrkkqnskrr kdsengylei pddtktsnvl qrcsgkeepd vcaplaliid
      841 gnslvyilek dlqselfdia tsckvvlccr vaplqkagiv dliksrtddm tlaigdgand
      901 vsmiqmadvg vgicgqegrq avmasdfamg qfrflkrlll vhghwnyqrv gylvlynfyr
      961 navfvlmlfw yilctafstt saltdwssvf ysviytsvpt ivigildkdl shktlleypk
     1021 lygvghrhea ynlqlfwitm idtlwqslvl fyiplftyke stidiwsmgs lwtiavvilv
     1081 nihlamdiqr wvfithaavw gsiiityacm vvldsipvfp nywtiyhlvk sptywltill
     1141 iiivallprf lfkvihqifw psdiqiarea eilrkvtpnl rskpdedss
//
LOCUS       XP_016685390             306 aa            linear   PLN 06-AUG-2024
DEFINITION  WRKY DNA-binding transcription factor 70 [Gossypium hirsutum].
ACCESSION   XP_016685390
VERSION     XP_016685390.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829901.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..306
                     /product="WRKY DNA-binding transcription factor 70"
                     /calculated_mol_wt=34356
     Region          132..192
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..306
                     /gene="LOC107903743"
                     /coded_by="XM_016829901.2:137..1057"
                     /db_xref="GeneID:107903743"
ORIGIN      
        1 mswntkkaie elvrgkeltk qlrdlltksl tddgfvdseg lvlkicdtfa ntlslltnsn
       61 tttttavpdy yynddlndvs qkptinitsd srksedsgds fksppstlrd rrgsykrrkc
      121 vdsrkkitsa lvddgyawrk ygqkqilnan hprsyfrcth ktdqgcqatk qaqkleddpp
      181 kyatiyyghh tcknklkpch fmvddstcnn dssillsfan dstltnkqgn dnpffssvkq
      241 eskedykpis eityngssss dyllsphhhq lstfdlssad mavlspdpdv lsdvvdsvhl
      301 ddllqf
//
LOCUS       XP_016685359             323 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685359
VERSION     XP_016685359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=35185
     Region          209..>271
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..323
                     /gene="LOC107903701"
                     /coded_by="XM_016829870.2:84..1055"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee skhsemevdr ekdeletese eesneawkqa lasfkeqalk
      121 lqsvsleaye vhskkalitl ketsevlkvq aekarndlte vvkemseegk eylstaaens
      181 ppevkeivet fsssaedfnd vskvhdfhvg ipygfilsvg gflsfmvtgs isairfgiil
      241 ggallalsvs slkshkrges splaikgqav issvlllrel sllirrstlc sflttvisga
      301 vvafymykll skdkprlepg tgn
//
LOCUS       XP_016685351             323 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685351
VERSION     XP_016685351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829862.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=35185
     Region          209..>271
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..323
                     /gene="LOC107903701"
                     /coded_by="XM_016829862.2:84..1055"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee skhsemevdr ekdeletese eesneawkqa lasfkeqalk
      121 lqsvsleaye vhskkalitl ketsevlkvq aekarndlte vvkemseegk eylstaaens
      181 ppevkeivet fsssaedfnd vskvhdfhvg ipygfilsvg gflsfmvtgs isairfgiil
      241 ggallalsvs slkshkrges splaikgqav issvlllrel sllirrstlc sflttvisga
      301 vvafymykll skdkprlepg tgn
//
LOCUS       XP_040943842             323 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943842
VERSION     XP_040943842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087908.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=35185
     Region          209..>271
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..323
                     /gene="LOC107903701"
                     /coded_by="XM_041087908.1:84..1055"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee skhsemevdr ekdeletese eesneawkqa lasfkeqalk
      121 lqsvsleaye vhskkalitl ketsevlkvq aekarndlte vvkemseegk eylstaaens
      181 ppevkeivet fsssaedfnd vskvhdfhvg ipygfilsvg gflsfmvtgs isairfgiil
      241 ggallalsvs slkshkrges splaikgqav issvlllrel sllirrstlc sflttvisga
      301 vvafymykll skdkprlepg tgn
//
LOCUS       XP_016685370             323 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685370
VERSION     XP_016685370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=35185
     Region          209..>271
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..323
                     /gene="LOC107903701"
                     /coded_by="XM_016829881.2:84..1055"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee skhsemevdr ekdeletese eesneawkqa lasfkeqalk
      121 lqsvsleaye vhskkalitl ketsevlkvq aekarndlte vvkemseegk eylstaaens
      181 ppevkeivet fsssaedfnd vskvhdfhvg ipygfilsvg gflsfmvtgs isairfgiil
      241 ggallalsvs slkshkrges splaikgqav issvlllrel sllirrstlc sflttvisga
      301 vvafymykll skdkprlepg tgn
//
LOCUS       XP_016685364             323 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685364
VERSION     XP_016685364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829875.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=35185
     Region          209..>271
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..323
                     /gene="LOC107903701"
                     /coded_by="XM_016829875.2:117..1088"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee skhsemevdr ekdeletese eesneawkqa lasfkeqalk
      121 lqsvsleaye vhskkalitl ketsevlkvq aekarndlte vvkemseegk eylstaaens
      181 ppevkeivet fsssaedfnd vskvhdfhvg ipygfilsvg gflsfmvtgs isairfgiil
      241 ggallalsvs slkshkrges splaikgqav issvlllrel sllirrstlc sflttvisga
      301 vvafymykll skdkprlepg tgn
//
LOCUS       XP_040943843             322 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943843
VERSION     XP_040943843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087909.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=35057
     Region          208..>270
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..322
                     /gene="LOC107903701"
                     /coded_by="XM_041087909.1:84..1052"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee shsemevdre kdeletesee esneawkqal asfkeqalkl
      121 qsvsleayev hskkalitlk etsevlkvqa ekarndltev vkemseegke ylstaaensp
      181 pevkeivetf sssaedfndv skvhdfhvgi pygfilsvgg flsfmvtgsi sairfgiilg
      241 gallalsvss lkshkrgess plaikgqavi ssvlllrels llirrstlcs flttvisgav
      301 vafymyklls kdkprlepgt gn
//
LOCUS       XP_040943844             322 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943844
VERSION     XP_040943844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087910.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=35057
     Region          208..>270
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..322
                     /gene="LOC107903701"
                     /coded_by="XM_041087910.1:84..1052"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee shsemevdre kdeletesee esneawkqal asfkeqalkl
      121 qsvsleayev hskkalitlk etsevlkvqa ekarndltev vkemseegke ylstaaensp
      181 pevkeivetf sssaedfndv skvhdfhvgi pygfilsvgg flsfmvtgsi sairfgiilg
      241 gallalsvss lkshkrgess plaikgqavi ssvlllrels llirrstlcs flttvisgav
      301 vafymyklls kdkprlepgt gn
//
LOCUS       XP_016685379             322 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016685379
VERSION     XP_016685379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829890.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=35057
     Region          208..>270
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..322
                     /gene="LOC107903701"
                     /coded_by="XM_016829890.2:84..1052"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee shsemevdre kdeletesee esneawkqal asfkeqalkl
      121 qsvsleayev hskkalitlk etsevlkvqa ekarndltev vkemseegke ylstaaensp
      181 pevkeivetf sssaedfndv skvhdfhvgi pygfilsvgg flsfmvtgsi sairfgiilg
      241 gallalsvss lkshkrgess plaikgqavi ssvlllrels llirrstlcs flttvisgav
      301 vafymyklls kdkprlepgt gn
//
LOCUS       XP_040943845             322 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FATTY ACID EXPORT 3, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943845
VERSION     XP_040943845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087911.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="protein FATTY ACID EXPORT 3, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=35057
     Region          208..>270
                     /region_name="Tmemb_14"
                     /note="Transmembrane proteins 14C; pfam03647"
                     /db_xref="CDD:461004"
     CDS             1..322
                     /gene="LOC107903701"
                     /coded_by="XM_041087911.1:84..1052"
                     /db_xref="GeneID:107903701"
ORIGIN      
        1 mlsiknpnps sgleplkrfh rassssspma lcsspslrlr spayrvslaa pkgfvvgfrs
       61 lhsrlpfhhs vvafaashee shsemevdre kdeletesee esneawkqal asfkeqalkl
      121 qsvsleayev hskkalitlk etsevlkvqa ekarndltev vkemseegke ylstaaensp
      181 pevkeivetf sssaedfndv skvhdfhvgi pygfilsvgg flsfmvtgsi sairfgiilg
      241 gallalsvss lkshkrgess plaikgqavi ssvlllrels llirrstlcs flttvisgav
      301 vafymyklls kdkprlepgt gn
//
LOCUS       XP_016685328             396 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685328
VERSION     XP_016685328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829839.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42840
     CDS             1..396
                     /gene="LOC107903692"
                     /coded_by="XM_016829839.2:8..1198"
                     /db_xref="GeneID:107903692"
ORIGIN      
        1 mdrnamtlsi llflivtdvs nassssslkl rylanespsk ndtvststtp pssplpilis
       61 asgkkklnpk ldpnssnktd fvmpllgdkk dpkplgkpkk vsaspqkekv sgnnpsltsn
      121 pksdktmken kakknnvggg nnlnsantvk rgytnkdkek kkttksnvig ndskseiddt
      181 cagiasrced qnsliacvkg fgtgskegvv lvhnkgektl nvnlmgpfgv sfpkrlrvpk
      241 hgieklnisl tisepialvl tagngdcflp lnaqasetyf fsklpsydkl ltpingayfl
      301 ivafiifggs laccmfrksr rhdsgipyqe lemglpesma ttnvetaegw dqvwdddwde
      361 dmavrsplgr nvanistngl tvrssnkdgw endwdd
//
LOCUS       XP_016685317             904 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing transcription repressor VAL2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016685317
VERSION     XP_016685317.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829828.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685317.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..904
                     /product="B3 domain-containing transcription repressor
                     VAL2 isoform X1"
                     /calculated_mol_wt=99398
     Region          319..420
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(323,326,334,337,339,371,383,385..386,388..389)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          592..634
                     /region_name="zf-CW"
                     /note="CW-type Zinc Finger; pfam07496"
                     /db_xref="CDD:462181"
     CDS             1..904
                     /gene="LOC107903686"
                     /coded_by="XM_016829828.2:335..3049"
                     /db_xref="GeneID:107903686"
ORIGIN      
        1 malkscmnvl cgastsiewr ngwtlrsgdf anlcdkcgsa yeqsifcdvf hskdsgwrdc
       61 nscgkplhcg ciasrfllel ldgggincvs cakksgfnhm iedekpngfg mvkadagqlh
      121 stsadnqlsg asienlqlmq lsnnaesigl rqllqlhndd ssgslgqmkq deflppprem
      181 gntcltsinq asngsveavk pttskvnifd slpqtnlsis lggslgnqng fpssvvdeks
      241 kmssvlqqas ksrhllpkpp rsvlatglem nagtvpqirv arppaegrgr nqllprywpr
      301 itdqelqqis gdsnstivpl fekvlsasda grigrlvlpk acaeayfppi sqpeglplri
      361 qdvkgkewvf qfrfwpnnns rmyvlegvtp ciqsmqlqag dtvtfsrkdp egklvmgfrk
      421 atntavvqet lppaipngtl ssesyfsgvf enlpiisgys gllqslkgst dphlnglskh
      481 sslaggdisg hksdmhedri redllltsml tperkrtrni gskskrllid sqdalelklt
      541 weeaqdllhp ppsikpsivt iedhdfeeyd eppvfgkrsi favrstggqe qwaqcdncsk
      601 wrrvpvdall ppkwtcadnn wdqsrsscsl pdeltprele illrlntdft krriiafhrq
      661 tqehesspgl nalanaailg dnvadsgtts vatttkhprh rpgcscivci qppsgkgkhk
      721 ptctcnvclt vkrrfktlmm rkkkrqsere aeialrnqqa wgpreeaeve ssskhvsphh
      781 dpsenearsv nklesknqsn nnklvskvve vnkgridlnc dpcrdddsqf gsstrmsmmn
      841 llhvaslple tylkenglts lvsdqqaist shappqtgnt sephddqcsh sateehetrd
      901 evnt
//
LOCUS       XP_040943846             904 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing transcription repressor VAL2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943846
VERSION     XP_040943846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087912.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..904
                     /product="B3 domain-containing transcription repressor
                     VAL2 isoform X1"
                     /calculated_mol_wt=99398
     Region          319..420
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(323,326,334,337,339,371,383,385..386,388..389)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          592..634
                     /region_name="zf-CW"
                     /note="CW-type Zinc Finger; pfam07496"
                     /db_xref="CDD:462181"
     CDS             1..904
                     /gene="LOC107903686"
                     /coded_by="XM_041087912.1:308..3022"
                     /db_xref="GeneID:107903686"
ORIGIN      
        1 malkscmnvl cgastsiewr ngwtlrsgdf anlcdkcgsa yeqsifcdvf hskdsgwrdc
       61 nscgkplhcg ciasrfllel ldgggincvs cakksgfnhm iedekpngfg mvkadagqlh
      121 stsadnqlsg asienlqlmq lsnnaesigl rqllqlhndd ssgslgqmkq deflppprem
      181 gntcltsinq asngsveavk pttskvnifd slpqtnlsis lggslgnqng fpssvvdeks
      241 kmssvlqqas ksrhllpkpp rsvlatglem nagtvpqirv arppaegrgr nqllprywpr
      301 itdqelqqis gdsnstivpl fekvlsasda grigrlvlpk acaeayfppi sqpeglplri
      361 qdvkgkewvf qfrfwpnnns rmyvlegvtp ciqsmqlqag dtvtfsrkdp egklvmgfrk
      421 atntavvqet lppaipngtl ssesyfsgvf enlpiisgys gllqslkgst dphlnglskh
      481 sslaggdisg hksdmhedri redllltsml tperkrtrni gskskrllid sqdalelklt
      541 weeaqdllhp ppsikpsivt iedhdfeeyd eppvfgkrsi favrstggqe qwaqcdncsk
      601 wrrvpvdall ppkwtcadnn wdqsrsscsl pdeltprele illrlntdft krriiafhrq
      661 tqehesspgl nalanaailg dnvadsgtts vatttkhprh rpgcscivci qppsgkgkhk
      721 ptctcnvclt vkrrfktlmm rkkkrqsere aeialrnqqa wgpreeaeve ssskhvsphh
      781 dpsenearsv nklesknqsn nnklvskvve vnkgridlnc dpcrdddsqf gsstrmsmmn
      841 llhvaslple tylkenglts lvsdqqaist shappqtgnt sephddqcsh sateehetrd
      901 evnt
//
LOCUS       XP_040943847             868 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing transcription repressor VAL2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943847
VERSION     XP_040943847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087913.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..868
                     /product="B3 domain-containing transcription repressor
                     VAL2 isoform X2"
                     /calculated_mol_wt=95617
     Region          319..420
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(323,326,334,337,339,371,383,385..386,388..389)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          556..598
                     /region_name="zf-CW"
                     /note="CW-type Zinc Finger; pfam07496"
                     /db_xref="CDD:462181"
     CDS             1..868
                     /gene="LOC107903686"
                     /coded_by="XM_041087913.1:335..2941"
                     /db_xref="GeneID:107903686"
ORIGIN      
        1 malkscmnvl cgastsiewr ngwtlrsgdf anlcdkcgsa yeqsifcdvf hskdsgwrdc
       61 nscgkplhcg ciasrfllel ldgggincvs cakksgfnhm iedekpngfg mvkadagqlh
      121 stsadnqlsg asienlqlmq lsnnaesigl rqllqlhndd ssgslgqmkq deflppprem
      181 gntcltsinq asngsveavk pttskvnifd slpqtnlsis lggslgnqng fpssvvdeks
      241 kmssvlqqas ksrhllpkpp rsvlatglem nagtvpqirv arppaegrgr nqllprywpr
      301 itdqelqqis gdsnstivpl fekvlsasda grigrlvlpk acaeayfppi sqpeglplri
      361 qdvkgkewvf qfrfwpnnns rmyvlegvtp ciqsmqlqag dtvtfsrkdp egklvmgfrk
      421 atntavvqsl kgstdphlng lskhsslagg disghksdmh edriredlll tsmltperkr
      481 trnigskskr llidsqdale lkltweeaqd llhpppsikp sivtiedhdf eeydeppvfg
      541 krsifavrst ggqeqwaqcd ncskwrrvpv dallppkwtc adnnwdqsrs scslpdeltp
      601 releillrln tdftkrriia fhrqtqehes spglnalana ailgdnvads gttsvatttk
      661 hprhrpgcsc ivciqppsgk gkhkptctcn vcltvkrrfk tlmmrkkkrq sereaeialr
      721 nqqawgpree aevessskhv sphhdpsene arsvnklesk nqsnnnklvs kvvevnkgri
      781 dlncdpcrdd dsqfgsstrm smmnllhvas lpletylken gltslvsdqq aistshappq
      841 tgntsephdd qcshsateeh etrdevnt
//
LOCUS       XP_040943848             554 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL1 [Gossypium hirsutum].
ACCESSION   XP_040943848
VERSION     XP_040943848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087914.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..554
                     /product="probable serine/threonine-protein kinase PBL1"
                     /calculated_mol_wt=61004
     Region          180..451
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(180..183,186,188,204,206,236,254..257,306,310..311,
                     313,323..324)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..554
                     /gene="LOC107903681"
                     /coded_by="XM_041087914.1:254..1918"
                     /db_xref="GeneID:107903681"
ORIGIN      
        1 mgfaymmgcf tvlkskkkks kqvvlvkpia rkelvptalp epqvqtqslr sappsfrtrv
       61 klihlnnktt cdrthalsap ssfdaveqda ltfaefveqe efkthvglvk eprspspqpl
      121 plpsprgtvl ktmgsfklan asvplvasgp lplppcgtlr nfgyeeiaaa chhfasdrci
      181 seglsfvlyk asfgddassy kkfeatvirl nsstqglref inevntlall qnpnlckllg
      241 yhardsseqr mlvyerlfhg sleqllygrs dgppldwnar mkialcsaqg laflheegpf
      301 lamynefsta yiqidkdfsa klsgygcvgh ipetggisvn avavanlsve tlekgwltpk
      361 snvwsfgivl lelltgrknl dnrypkeern lvkwsrpfla dgcrlslimd phlkgrfpmk
      421 aartiadiaq rclqkdpser ptmrtvvenl kvvqdikysc wfplqepati vgkqlsrsps
      481 fngvitpapg lsflpsppsr tglfisltrp ptsvsalpsr acsstlslqe lerqearrsa
      541 attigrtsve vegf
//
LOCUS       XP_016688593             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016688593
VERSION     XP_016688593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833104.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21786
     CDS             1..186
                     /gene="LOC107906185"
                     /coded_by="XM_016833104.2:72..632"
                     /db_xref="GeneID:107906185"
ORIGIN      
        1 mqqswklniq artqifnfkl katkilptge fhrfslllrl hkfflklrlk sgstvsissq
       61 qkrslksrfl sflekirfrr erkgitiqyp dvksvvhrvk qfadkksnwa gslviailsl
      121 lqqwiskkdg kgiiihtcii llslywvlyl nrgknrrvwm vgtavswvvf nlgkdyvseh
      181 awnwip
//
LOCUS       XP_016688578             171 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL74 [Gossypium hirsutum].
ACCESSION   XP_016688578
VERSION     XP_016688578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833089.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="RING-H2 finger protein ATL74"
                     /calculated_mol_wt=18760
     Region          93..136
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            121..126
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..171
                     /gene="LOC107906180"
                     /coded_by="XM_016833089.2:260..775"
                     /db_xref="GeneID:107906180"
ORIGIN      
        1 mstlapsnen qtydpfltpm enfyshaimk lavlllamil vvqlnslihg rcrenperaa
       61 atqlvtvglk krdlkripva vyrtggtsft atdcpiclge fldgekvrvl pkcnhgfhvk
      121 cidkwlmsns scpncrhsll ehetvnrdai agpdrlptds gdvvivvqeg s
//
LOCUS       XP_016688558             180 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL74 [Gossypium hirsutum].
ACCESSION   XP_016688558
VERSION     XP_016688558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833069.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..180
                     /product="RING-H2 finger protein ATL74"
                     /calculated_mol_wt=19670
     Region          102..145
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            130..135
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..180
                     /gene="LOC107906168"
                     /coded_by="XM_016833069.1:149..691"
                     /db_xref="GeneID:107906168"
ORIGIN      
        1 mdrrsmgetq istlvpavek qtddsyitkt tnfdtnmvii laallcavlc alvfnsinrc
       61 rrrespeqaa arlaatglkk rdlrripvav ygmggasfta tecpiclgef ldgekvrvlp
      121 kcnhgfhvkc idtwlmshss cpncrhslle hktenkdvta gsgrqptdng dlvifvqegs
//
LOCUS       XP_016688566             180 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL74 [Gossypium hirsutum].
ACCESSION   XP_016688566
VERSION     XP_016688566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833077.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..180
                     /product="RING-H2 finger protein ATL74"
                     /calculated_mol_wt=19670
     Region          102..145
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            130..135
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..180
                     /gene="LOC107906168"
                     /coded_by="XM_016833077.1:148..690"
                     /db_xref="GeneID:107906168"
ORIGIN      
        1 mdrrsmgetq istlvpavek qtddsyitkt tnfdtnmvii laallcavlc alvfnsinrc
       61 rrrespeqaa arlaatglkk rdlrripvav ygmggasfta tecpiclgef ldgekvrvlp
      121 kcnhgfhvkc idtwlmshss cpncrhslle hktenkdvta gsgrqptdng dlvifvqegs
//
LOCUS       XP_016685255             585 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein CAD1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685255
VERSION     XP_016685255.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829766.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685255.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..585
                     /product="MACPF domain-containing protein CAD1 isoform X1"
                     /calculated_mol_wt=65220
     Region          106..318
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..585
                     /gene="LOC107903654"
                     /coded_by="XM_016829766.2:553..2310"
                     /db_xref="GeneID:107903654"
ORIGIN      
        1 mgengnaaal htainavqal grgfdvnydt rllyckgvmg sriveideeh vrdiylddqi
       61 vlpnisrdir sskesigrrs sgvcnfhemv eyfnkkanvs ggfalgsfns vfsftgstni
      121 daattkmlsm dgfyiplakl qltrsplvlq ekvkravpts wdpsslasfi enfgthvvts
      181 vtiggkdviy ikqhhsspls tmeiknyvqd ignqrfsdke shtssgqikl kdkgldpglf
      241 nsqgiypqps napclngked vtvifrrrgg ddleqnhtqw aktvrsspdv iemtfypita
      301 lldgvagkeh ltraislyle ykppveelry flefqipriw apvqdkipgh qrkepvcpsl
      361 qfsmmgqkly vsqeqvsvgr kpvtglqlrl egikqnrlsi hlqhlaslpk illphwdthv
      421 aigapkwqgp eeqdsrwfep vkwknfshvs tapienpetf igdlsgvyiv tgaqlgvwnf
      481 gsrnvlymrl lysrlpccti rrslwdhcpn dklkkvvati gttnsgdsss gsqenvvnkl
      541 akfvdmsems kgpqdppghw lvtggklgve kgkiilrvky sllny
//
LOCUS       XP_016685266             499 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein CAD1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016685266
VERSION     XP_016685266.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685266.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..499
                     /product="MACPF domain-containing protein CAD1 isoform X2"
                     /calculated_mol_wt=55689
     Region          20..232
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..499
                     /gene="LOC107903654"
                     /coded_by="XM_016829777.2:134..1633"
                     /db_xref="GeneID:107903654"
ORIGIN      
        1 mvmveyfnkk anvsggfalg sfnsvfsftg stnidaattk mlsmdgfyip laklqltrsp
       61 lvlqekvkra vptswdpssl asfienfgth vvtsvtiggk dviyikqhhs splstmeikn
      121 yvqdignqrf sdkeshtssg qiklkdkgld pglfnsqgiy pqpsnapcln gkedvtvifr
      181 rrggddleqn htqwaktvrs spdviemtfy pitalldgva gkehltrais lyleykppve
      241 elryflefqi priwapvqdk ipghqrkepv cpslqfsmmg qklyvsqeqv svgrkpvtgl
      301 qlrlegikqn rlsihlqhla slpkillphw dthvaigapk wqgpeeqdsr wfepvkwknf
      361 shvstapien petfigdlsg vyivtgaqlg vwnfgsrnvl ymrllysrlp cctirrslwd
      421 hcpndklkkv vatigttnsg dsssgsqenv vnklakfvdm semskgpqdp pghwlvtggk
      481 lgvekgkiil rvkysllny
//
LOCUS       XP_016685286             353 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY13 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016685286
VERSION     XP_016685286.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829797.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685286.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..353
                     /product="serine/threonine-protein kinase STY13 isoform
                     X1"
                     /calculated_mol_wt=39287
     Region          43..298
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(43..47,51,62,64,98,113..116,120,122,161,163,
                     165..166,168,180,183,198..201)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(43..47,51,62,64,98,113..116,120,161,163,165..166,
                     168,180)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(47,120,122,161,163,165,183,198..201)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(179..187,197..201)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..353
                     /gene="LOC107903661"
                     /coded_by="XM_016829797.2:471..1532"
                     /db_xref="GeneID:107903661"
ORIGIN      
        1 mscseaetrs vavsnglits adeltidqnl lidpkslfig skigegahgk vyegrygdri
       61 vaikvlhrgs tveeraales rfarevnmms rvkhenlvkf fgackdplma ivtellpgms
      121 lrkylisirp kvldphvaln faldiaramd clhangiihr dlkpdnlllt anqrsvklad
      181 fglareesvt emmtaetgty rwmapelyst vtlrrgekkh ynnkvdvysf givlwelltn
      241 rmpfegmsnl qaayaaafkq erpslpkdis pdlafiiqsc wvedpnmrps fsqivrmlna
      301 flftltppps sipesdasek agtsngtite lsvrakgkfa flrqlfaakr trn
//
LOCUS       XP_016685293             296 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY13 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016685293
VERSION     XP_016685293.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829804.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685293.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="serine/threonine-protein kinase STY13 isoform
                     X2"
                     /calculated_mol_wt=33331
     Region          10..241
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63,65,104,106,108,126,141..144)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(122..130,140..144)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..296
                     /gene="LOC107903661"
                     /coded_by="XM_016829804.2:704..1594"
                     /db_xref="GeneID:107903661"
ORIGIN      
        1 makytkevlh rgstveeraa lesrfarevn mmsrvkhenl vkffgackdp lmaivtellp
       61 gmslrkylis irpkvldphv alnfaldiar amdclhangi ihrdlkpdnl lltanqrsvk
      121 ladfglaree svtemmtaet gtyrwmapel ystvtlrrge kkhynnkvdv ysfgivlwel
      181 ltnrmpfegm snlqaayaaa fkqerpslpk dispdlafii qscwvedpnm rpsfsqivrm
      241 lnaflftltp ppssipesda sekagtsngt itelsvrakg kfaflrqlfa akrtrn
//
LOCUS       XP_040943850             296 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY13 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943850
VERSION     XP_040943850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087916.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="serine/threonine-protein kinase STY13 isoform
                     X2"
                     /calculated_mol_wt=33331
     Region          10..241
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63,65,104,106,108,126,141..144)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(122..130,140..144)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..296
                     /gene="LOC107903661"
                     /coded_by="XM_041087916.1:613..1503"
                     /db_xref="GeneID:107903661"
ORIGIN      
        1 makytkevlh rgstveeraa lesrfarevn mmsrvkhenl vkffgackdp lmaivtellp
       61 gmslrkylis irpkvldphv alnfaldiar amdclhangi ihrdlkpdnl lltanqrsvk
      121 ladfglaree svtemmtaet gtyrwmapel ystvtlrrge kkhynnkvdv ysfgivlwel
      181 ltnrmpfegm snlqaayaaa fkqerpslpk dispdlafii qscwvedpnm rpsfsqivrm
      241 lnaflftltp ppssipesda sekagtsngt itelsvrakg kfaflrqlfa akrtrn
//
LOCUS       XP_016685214             884 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016685214
VERSION     XP_016685214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829725.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..884
                     /product="uncharacterized protein"
                     /calculated_mol_wt=97126
     Region          64..170
                     /region_name="NT_PAP_TUTase"
                     /note="Nucleotidyltransferase (NT) domain of poly(A)
                     polymerases and terminal uridylyl transferases; cd05402"
                     /db_xref="CDD:143392"
     Site            order(87..89,99..100,102,145..146,148,150,159,166..167,
                     170)
                     /site_type="active"
                     /db_xref="CDD:143392"
     Site            order(87,145,148,150,159,166..167)
                     /site_type="active"
                     /note="putative primer-binding pocket [active]"
                     /db_xref="CDD:143392"
     Site            order(100,102,159)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143392"
     CDS             1..884
                     /gene="LOC107903624"
                     /coded_by="XM_016829725.2:265..2919"
                     /db_xref="GeneID:107903624"
ORIGIN      
        1 mflmgdlrdw spepngvssr drysssssss snqagisaey wrkaeeatqg iiarvqptvv
       61 seerrkavid yvqrlirnyl gcevfpfgsv plktylpdgd idltafggln feealandac
      121 svleredhnt aaefvvkdvq liraevklvk clvqnivvdi sfnqlgglct lcfleqvdrl
      181 igqdhlfkrs iilikawcyy esrilgahhg listygletl vlyifhlfhs sldgplavly
      241 kfldyfskfd wenycislng pipisslpdi vvetpenggg dlllsndflr ecvetfsvps
      301 rgfdanprif pqkhlnivdp lkennnlgrs vskgnfyrir saftygarkl gqilsqseet
      361 lgdelhkffs ntldrhgngq rpdvqdpapl srfrglgatq svsgtescqe dqnfyesess
      421 nsstvtgnyr ssdnegslyk vyngnmsere tdvgitfkep qgsanassis eirltgdakd
      481 latsriqglv isnnahksyp pnaadvfpsg tvrhaphlyf cnssldngei rngnveckqs
      541 ensglseena tsgilgesse kmgadvhgdh senlsvssrg vqspvgpknh plslksawss
      601 edpypgyssn pasysaapsr ellsslsdlc gdydanirsl sygqwwfdya fsaavppmss
      661 plvsqfqskn swdvvrksgq frrnaispmn tnggvprqay ypinppvlhg sgfgieempk
      721 prgtgtyfpn pntnyykdrs ltargrnpas arsprnngra itspepnspe rnnrevaqmh
      781 svnqgvgksg sseprhsgse kalspnsngs mhqpdrlvef gsmralplvp tftetgkphn
      841 pgspnaqnst gmerlksaas mdqdrilvqs fhlkneedfp plsi
//
LOCUS       XP_016685202             304 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor OFP1 [Gossypium hirsutum].
ACCESSION   XP_016685202
VERSION     XP_016685202.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829713.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685202.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..304
                     /product="transcription repressor OFP1"
                     /calculated_mol_wt=34608
     Region          1..>39
                     /region_name="DNA_binding_2"
                     /note="DNA-binding domain; pfam13724"
                     /db_xref="CDD:433432"
     Region          244..300
                     /region_name="Ovate"
                     /note="Transcriptional repressor, ovate; pfam04844"
                     /db_xref="CDD:461454"
     CDS             1..304
                     /gene="LOC107903617"
                     /coded_by="XM_016829713.2:194..1108"
                     /db_xref="GeneID:107903617"
ORIGIN      
        1 mgnsrfklsd mfpnvwfykl kdmnrtkhhe kkkhrpsssk qeqphlnprk syhftrelvp
       61 ihvspdqplr kstkkrnprr nfrsppskvl tssvsagcsc retiknkpds ppeysassss
      121 slsssddssl pqesfdnlvw ssskanddii sdadvkkide flpelelppi vtkpakfndm
      181 vkdiknktkk fghspsgvkl rvnspkianr rlvqgharrs issnssssss rrslsesfav
      241 vkssvdpqrd fresmvemim enniraskdl edllacylsl nsdeyheiii kvfkqiwfdl
      301 idvr
//
LOCUS       XP_016685193             684 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 16 [Gossypium hirsutum].
ACCESSION   XP_016685193
VERSION     XP_016685193.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829704.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..684
                     /product="U-box domain-containing protein 16"
                     /calculated_mol_wt=74674
     Region          272..324
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(273,276,278..281,300,304,313)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          381..>480
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          401..444
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          405..445
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          451..486
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..684
                     /gene="LOC107903607"
                     /coded_by="XM_016829704.2:287..2341"
                     /db_xref="GeneID:107903607"
ORIGIN      
        1 mavsphafpp rkrrpsagaf vspkladinl vksllslsqe issfkpfqcl lkrnsvssin
       61 kskllsilfd eliknpasvf fspstllcfe emyialqrik tlledcsngs kmwmlmqiqv
      121 lsnnfheltl elstlldifp fkeielsqdv eelvvlvrkq cgkskpvvdp gdvflrrevl
      181 tmldriekei vpdqlklkkv meylglrdgs screeieslq deiqnqvdek sksdivslig
      241 lvryancvlf gsstaskpdh rrqkstsdlt ipadfrcpit lelmrdpvvv atgqtydrks
      301 inlwiesghs tcpktgqtli htnlipnral rnlitmwcre qgipfetvgn nekvnsvkgt
      361 kaafeatkmt vsflvnklsg sqtmeaangv vyelralskt dsdsraciae agaipilvry
      421 lgssvglehp nlqvnavtti lnlsileank trivetdgal ngvievlrsg atweakgnaa
      481 atifslsgih gyrkglgrkt rvikglldla kdgttscqkd allailnlag dretvgrlve
      541 ggviqmvsgv idelpeeava ileavtrrgg laaiaaafni ikklgvilre gsdnaresas
      601 atlvtmcrkg gpemvaelav ipgieriiwe vmgggtargr rkaatllril rrwaagldld
      661 tnnvvdssnm itmtvgtsrt ilqa
//
LOCUS       XP_016685185             430 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 14 [Gossypium
            hirsutum].
ACCESSION   XP_016685185
VERSION     XP_016685185.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829696.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685185.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..430
                     /product="CBL-interacting serine/threonine-protein kinase
                     14"
                     /calculated_mol_wt=49198
     Region          26..280
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(33..36,39,41,54,56,88,104..107,149,153..154,156,
                     166..167)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          308..417
                     /region_name="CIPK_C"
                     /note="C-terminal regulatory domain of Calcineurin B-Like
                     (CBL)-interacting protein kinases; cd12195"
                     /db_xref="CDD:213380"
     Site            order(308..316,319..325,331..334,336..338,340,388,392,398)
                     /site_type="other"
                     /note="CBL interaction site [polypeptide binding]"
                     /db_xref="CDD:213380"
     Site            336..337
                     /site_type="other"
                     /note="putative PP2C binding site [polypeptide binding]"
                     /db_xref="CDD:213380"
     CDS             1..430
                     /gene="LOC107903597"
                     /coded_by="XM_016829696.2:100..1392"
                     /db_xref="GeneID:107903597"
ORIGIN      
        1 maetgdrsst sndlseisse mallgkyevg kllgygafak vyqarnmqtg etvaikavsk
       61 kkvlrgkmma qvkreiaimr rlnhpnivkl ievlatkskv yfvmeyakgg efltrinkgr
      121 fseelcrwyf qqlisavgfc hsrgvfhrdl kpenllfden wnlkvtdfgl stmteqvrqd
      181 gllhtfcgtp ayvapeilsk kgydgakadi wscgivlyvl hagylpfnda nmtvmyrniy
      241 rgeykfpkwt spelrrlisr lldtnpetri tideiindpw fkngykevkv qpvdfdlkee
      301 tqsnvrfnaf dlisfstgfd lsglfndnef svqrerfvsa ekpwriieri keevakmenv
      361 evismresgi rlehlgnnlv iaidinqlte elvvveagrr eltagssdei wneklkprls
      421 dlvynsesel
//
LOCUS       XP_016685154             450 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting protein kinase 2 [Gossypium hirsutum].
ACCESSION   XP_016685154
VERSION     XP_016685154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829665.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..450
                     /product="CBL-interacting protein kinase 2"
                     /calculated_mol_wt=50732
     Region          11..265
                     /region_name="STKc_SnRK3"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     3; cd14663"
                     /db_xref="CDD:271133"
     Site            order(18..22,26,39,41,73,89..92,96,98..99,101,133..134,
                     136,138..139,141,151..152,155,172..176,178,208..211)
                     /site_type="active"
                     /db_xref="CDD:271133"
     Site            order(18..21,26,39,41,73,89..92,96,138..139,141,151..152)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271133"
     Site            order(96,98..99,101,134,136,138,155,172..176,178,208..211)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271133"
     Site            order(151..162,169..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271133"
     Region          297..410
                     /region_name="CIPK_C"
                     /note="C-terminal regulatory domain of Calcineurin B-Like
                     (CBL)-interacting protein kinases; cd12195"
                     /db_xref="CDD:213380"
     Site            order(297..305,308..314,319..322,324..326,328,379,383,389)
                     /site_type="other"
                     /note="CBL interaction site [polypeptide binding]"
                     /db_xref="CDD:213380"
     Site            324..325
                     /site_type="other"
                     /note="putative PP2C binding site [polypeptide binding]"
                     /db_xref="CDD:213380"
     CDS             1..450
                     /gene="LOC107903572"
                     /coded_by="XM_016829665.2:609..1961"
                     /db_xref="GeneID:107903572"
ORIGIN      
        1 mepkgvvlmg ryeigrllgq gtfakvhrar nletgmnvai kivdkekvlk vgmidqikre
       61 isvmrlvrhp nvielyevma tktkiyfvme yakggelfnk vvkgklkeda arkyfqqlis
      121 avdfchsrgv chrdlkpenl lldencnlkv tdfglsalae skqqdgllht tcgtpayvap
      181 evinrrgydg ckadiwscgv ilyvllagyl pfqdsnlmem yrkigkgefk fpnwfapdvr
      241 rlvskildpn pktrismeki menpwfrkgl dpkpelvdpe vkepaiglqt gtpcnlnafd
      301 iislsagfdl sglfreqeqk kevrftsnkt astiiskled vakrlqlkik kkggglmkme
      361 gcqegrkgvl gidaeifeit pffhlvevkk sngdtleyqk vmqqdirpal sdivwawqge
      421 plpqqlpppp pteeqhhesq pfhvvstqss
//
LOCUS       XP_016685165             227 aa            linear   PLN 06-AUG-2024
DEFINITION  prosaposin [Gossypium hirsutum].
ACCESSION   XP_016685165
VERSION     XP_016685165.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829676.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="prosaposin"
                     /calculated_mol_wt=25768
     Region          57..129
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     Region          142..216
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..227
                     /gene="LOC107903579"
                     /coded_by="XM_016829676.2:156..839"
                     /db_xref="GeneID:107903579"
ORIGIN      
        1 mdarfgllfl fmlgatwacn arqlevveie isdpsvvqvn wrqdekviet varndnvctl
       61 ceqftteavd ylsqnkmqte iieilhkscs rlrafepqci tlvdyyaplf fleissvqpq
      121 dfctkfnlcq kvalissqfr edscsmchra isevlmklqd pdtkleilel llkgcnsvqn
      181 yvqkckrlvf eygpliltna ehflettdvc tilhacdggk qesvads
//
LOCUS       XP_016685174              65 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S28 [Gossypium hirsutum].
ACCESSION   XP_016685174
VERSION     XP_016685174.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829685.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..65
                     /product="40S ribosomal protein S28"
                     /calculated_mol_wt=7415
     Region          6..65
                     /region_name="S1_S28E"
                     /note="S28E, S1-like RNA-binding domain. S1-like
                     RNA-binding domains are found in a wide variety of
                     RNA-associated proteins. S28E protein is a component of
                     the 30S ribosomal subunit. S28E is highly conserved among
                     archaea and eukaryotes. S28E may control...; cd04457"
                     /db_xref="CDD:239904"
     Site            order(11,27,39,41)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:239904"
     CDS             1..65
                     /gene="LOC107903587"
                     /coded_by="XM_016829685.1:2..199"
                     /db_xref="GeneID:107903587"
ORIGIN      
        1 mdsqikfavv vkimgrtgsr gqvtqvrvkf lddqnrfimr nvkgpvregd iltllesere
       61 arrlr
//
LOCUS       XP_016685131             553 aa            linear   PLN 06-AUG-2024
DEFINITION  WEB family protein At2g38370 [Gossypium hirsutum].
ACCESSION   XP_016685131
VERSION     XP_016685131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829642.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..553
                     /product="WEB family protein At2g38370"
                     /calculated_mol_wt=61374
     Region          <156..417
                     /region_name="WEMBL"
                     /note="Weak chloroplast movement under blue light;
                     pfam05701"
                     /db_xref="CDD:461718"
     CDS             1..553
                     /gene="LOC107903558"
                     /coded_by="XM_016829642.2:375..2036"
                     /db_xref="GeneID:107903558"
ORIGIN      
        1 mevesceigg ggvsatktgg lcggvraeid tsapfesvke aasrfggigy wkpsqpklms
       61 etehdgeevd iakleeqaak lekdlivker etldvlkele ttkltveelk lklkkeasev
      121 dvkntdaeke nrcgghpnlv gslspcpsaa pglilmelkq aklnlsrttn dladirgsve
      181 slnkkleker nslertrerl sqnsskissl eeeltqtrlk lqvakeaeik tgvdnpldis
      241 relqrlssea eqfkkigqaa ksevsravse veqtktrikt temrilaakk mkeaaraaea
      301 lalaeiknls rkeslsgnpv qkaegvtisy eeysalmska qnaeelsnkk vvdamvqvde
      361 anvskmeilk kveeateeik tskkaleeal nrveaankgk leveealrkw rsehgqkrrs
      421 lhnptkfkns ypshnrkdsr lfdvnglnlv ndgptpvlkp tlsigqilsr klllpedfet
      481 emlaekgtvk rkvslgqmlg kqngdyiins qkteretshk qfsgkrkkfg farfslllak
      541 qnkkkkkptl nlr
//
LOCUS       XP_016685142             498 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 71D10 [Gossypium hirsutum].
ACCESSION   XP_016685142
VERSION     XP_016685142.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829653.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685142.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..498
                     /product="cytochrome P450 71D10"
                     /calculated_mol_wt=56166
     Region          61..486
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(98,123,127,135,181,295,298..299,302..303,362,
                     366..367,368,428..431,434..438,441..442)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(203,207,229,294,297..298,367)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..498
                     /gene="LOC107903568"
                     /coded_by="XM_016829653.2:208..1704"
                     /db_xref="GeneID:107903568"
ORIGIN      
        1 mfiminiiis lfmilvivhl lkpkkpvkkl ppgpwklpli gnmhqlvgsl phqtlanmak
       61 tygslihlkt gsisyiviss pelaeealkt ndisfasrpt ilaskimsyd stnivfspyg
      121 sywrhlrkic vtellspkrv esfrkvreee vssfinsial wgsssginls kkifsltygv
      181 tsraafsekc kdqeafisii trvsklsgrf siadmfpslk llellsgrle feklhkeadr
      241 ilediiaehq errkiyggds eemkdlvdil ldlqensele fplsvdnika iildmfsags
      301 etssitvewt maellknpgi mekaknevrr vftgkgyvde gsihelkyvk avikesirlh
      361 pavplvlrec rkdcrldgyd ipakfkvlvn agaigkdpkh wdnaetfcpe rfldnsidfk
      421 gtdfkyipfg agrricpgis falsnielpi anllyhfdwk lpngmkpedl dmtealglsi
      481 rrkhelfaip iayhphve
//
LOCUS       XP_016688522             163 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor SCREAM2 [Gossypium hirsutum].
ACCESSION   XP_016688522
VERSION     XP_016688522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016833033.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="transcription factor SCREAM2"
                     /calculated_mol_wt=17751
     Region          17..>53
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(19..20,22..23,27,34..35,38..39,42,44..45,48..49)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..163
                     /gene="LOC107906144"
                     /coded_by="XM_016833033.2:173..664"
                     /db_xref="GeneID:107906144"
ORIGIN      
        1 msskggrkka sssssvheql qqlrsltnst avnktsiivd asryieelkd kvdkmsqeta
       61 tsshastssq nslpmvtvet lekgflinvf lekncpgllv siletfeelg ldvlearvsc
      121 eesfkleaig genegnveci daqmvkqavm qairkwgens hqe
//
LOCUS       XP_016685103             483 aa            linear   PLN 06-AUG-2024
DEFINITION  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016685103
VERSION     XP_016685103.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829614.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..483
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     3, mitochondrial isoform X1"
                     /calculated_mol_wt=52755
     Region          61..477
                     /region_name="ArgD"
                     /note="Acetylornithine aminotransferase/4-aminobutyrate
                     aminotransferase [Amino acid transport and metabolism];
                     COG0160"
                     /db_xref="CDD:439930"
     CDS             1..483
                     /gene="LOC107903538"
                     /coded_by="XM_016829614.2:60..1511"
                     /db_xref="GeneID:107903538"
ORIGIN      
        1 mrrfipatav lsektkyslp lrrwrwrcfs qvaqkefdnk ggvvvpkmps fdyapppytg
       61 psaaeilskr keylspamfy lynkplnvvd grmqylfden grryldafgg iatvccghch
      121 phvvdaivnq tkrlqhstil ylnhaiadla ealanklpgn lkvvfftnsg teanelaimm
      181 arlytgchdi islrnayhgn aagtmgataq snwkfnviqs gvhhainpdp yrgvfgsege
      241 kyakdiqdli qfgtsgniag fiseaiqgvg giielapgyl paayniikka gglciadevq
      301 ggfgrtgshf wgfenhgvvp divtmakgig ngiplgavit tpeiaevltr rnyfntfggn
      361 pvctaaglav lnviekeklq dnafvvgsyl kerlialkdk hdligdvrgr glmlgvelvt
      421 dhelktpakl etlhlldqmk eigvlvgkgg fygnvfritp plcfttedad flvdamdytm
      481 skm
//
LOCUS       XP_016685110             392 aa            linear   PLN 06-AUG-2024
DEFINITION  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016685110
VERSION     XP_016685110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829621.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="alanine--glyoxylate aminotransferase 2 homolog
                     3, mitochondrial isoform X2"
                     /calculated_mol_wt=42213
     Region          3..386
                     /region_name="ArgD"
                     /note="Acetylornithine aminotransferase/4-aminobutyrate
                     aminotransferase [Amino acid transport and metabolism];
                     COG0160"
                     /db_xref="CDD:439930"
     CDS             1..392
                     /gene="LOC107903538"
                     /coded_by="XM_016829621.2:214..1392"
                     /db_xref="GeneID:107903538"
ORIGIN      
        1 mqylfdengr ryldafggia tvccghchph vvdaivnqtk rlqhstilyl nhaiadlaea
       61 lanklpgnlk vvfftnsgte anelaimmar lytgchdiis lrnayhgnaa gtmgataqsn
      121 wkfnviqsgv hhainpdpyr gvfgsegeky akdiqdliqf gtsgniagfi seaiqgvggi
      181 ielapgylpa ayniikkagg lciadevqgg fgrtgshfwg fenhgvvpdi vtmakgigng
      241 iplgavittp eiaevltrrn yfntfggnpv ctaaglavln viekeklqdn afvvgsylke
      301 rlialkdkhd ligdvrgrgl mlgvelvtdh elktpaklet lhlldqmkve igvlvgkggf
      361 ygnvfritpp lcfttedadf lvdamdytms km
//
LOCUS       XP_040943851            1355 aa            linear   PLN 06-AUG-2024
DEFINITION  regulatory-associated protein of TOR 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943851
VERSION     XP_040943851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087917.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1355
                     /product="regulatory-associated protein of TOR 1 isoform
                     X1"
                     /calculated_mol_wt=148778
     Region          111..262
                     /region_name="Raptor_N"
                     /note="Raptor N-terminal CASPase like domain; pfam14538"
                     /db_xref="CDD:464202"
     Region          1047..1348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(1054,1058,1064..1065,1077..1078,1101,1105,
                     1111..1112,1131..1132,1153,1158,1164..1165,1178,1198,1202,
                     1208..1209,1222..1223,1246,1250,1256..1257,1270..1271,
                     1288,1293,1299..1300,1312..1313,1337,1341,1347..1348)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          1086..1131
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1136..1176
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1184..1221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1230..1269
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1275..1316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1323..1347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1355
                     /gene="LOC107903529"
                     /coded_by="XM_041087917.1:546..4613"
                     /db_xref="GeneID:107903529"
ORIGIN      
        1 malgdlmtsr fsqlslavsn hvidgnvssg gyheddvays dlmsqrrdld aastssyana
       61 vtstasvptt maylpqtvvl celrhaafea stptgpsdsg lvskwrpkdr mktgcvalvl
      121 clnisvdppd vikispcarm ecwtdpfsma pqkaletigk nlrdqyerwq pkarskveld
      181 ptvdevkklc ntcrryakse rvlfhynghg vpkptangei wlfnksytqy iplpisdlds
      241 wlktpsiyvf dcsaagmvvn afielldcgt snypgssrdc illaaceahe tlpqsaefpa
      301 dvftsclttp ikmalrwfct rsllheslds slidkipgrq ndrktllgel nwiftavtdt
      361 iawnvlphdl frrlfrqdll vaslfrnfll aerimrsanc spisypmlpp thqhhmwdaw
      421 dmaaeiclsq lpslvedpna efqpssffte qliafevwld hgsehkkppe qlpivlqvll
      481 sqchrfralv llgrfldmgp wavdlalsvg ifpyvlkllq tttpelrqil vfiwtkilal
      541 dkscqvdlvk dgghvyfirf lnsaeaypeq ramaafvlav ivdghrrgqe acieagliqv
      601 clkqlhgftq neaqteplll qwlclclgkl wedfteaqti glqadvpaic aplhsepqpe
      661 vrasavyala tlldvgfdsf rdgiggdeec ddveknraem iiiksllnvv sdgsplvrae
      721 vavalahfaf ghkqhlksia aaywkpqpns llnslpslan ikgtgsgniv ssqigpltam
      781 vrdgrvstss platagimhg splsddssql sdsgilndgv sngevnhsrp kpldnamysq
      841 cvlamftlar dpsprvaslg rrvlsiigie qvtksvkpag nsawpsdpan ssstpsisgl
      901 arssswldin gghmaltfrt ppvspprqny lagirrvcsl dfrphlmnsp dsgladpllg
      961 sasgsersll pqstiynfsc ghfcksllta sddseellak reeqerfale hiakcqhssv
     1021 sklnnnsqia swdtrfetgt rtallqpfsp iviaadener irvwnyeeat llngfdnhdf
     1081 pekgisklcl lnelddslll vassdgniri wkdytlrgkq khvtafssiq ghkpgmrsln
     1141 avvdwqqqsg ylyasgeiss imlwdldkeq lvnsipsssd csvsalassq vhagqfaagf
     1201 vdgsvrlydi rtpdmlvrtt rphtqqvarv vgigfqpgld qgkivsasqa gdiqfldirs
     1261 qrdtdltida hrgsltalav hrhapiiasg sakqlikvfs lkgeqlgtir yqhtfmaqki
     1321 gsvscltfhp yqvllaagaa dacvsiyadd nshtr
//
LOCUS       XP_040943852            1316 aa            linear   PLN 06-AUG-2024
DEFINITION  regulatory-associated protein of TOR 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943852
VERSION     XP_040943852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087918.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1316
                     /product="regulatory-associated protein of TOR 1 isoform
                     X2"
                     /calculated_mol_wt=144440
     Region          111..>225
                     /region_name="Raptor_N"
                     /note="Raptor N-terminal CASPase like domain; pfam14538"
                     /db_xref="CDD:464202"
     Region          1008..1309
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(1015,1019,1025..1026,1038..1039,1062,1066,
                     1072..1073,1092..1093,1114,1119,1125..1126,1139,1159,1163,
                     1169..1170,1183..1184,1207,1211,1217..1218,1231..1232,
                     1249,1254,1260..1261,1273..1274,1298,1302,1308..1309)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          1047..1092
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1097..1137
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1145..1182
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1191..1230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1236..1277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1284..1308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1316
                     /gene="LOC107903529"
                     /coded_by="XM_041087918.1:540..4490"
                     /db_xref="GeneID:107903529"
ORIGIN      
        1 malgdlmtsr fsqlslavsn hvidgnvssg gyheddvays dlmsqrrdld aastssyana
       61 vtstasvptt maylpqtvvl celrhaafea stptgpsdsg lvskwrpkdr mktgcvalvl
      121 clnisvdppd vikispcarm ecwtdpfsma pqkaletigk nlrdqyerwq pkarskveld
      181 ptvdevkklc ntcrryakse rvlfhynghg vpkptangei wlfnklldcg tsnypgssrd
      241 cillaaceah etlpqsaefp advftscltt pikmalrwfc trsllhesld sslidkipgr
      301 qndrktllge lnwiftavtd tiawnvlphd lfrrlfrqdl lvaslfrnfl laerimrsan
      361 cspisypmlp pthqhhmwda wdmaaeicls qlpslvedpn aefqpssfft eqliafevwl
      421 dhgsehkkpp eqlpivlqvl lsqchrfral vllgrfldmg pwavdlalsv gifpyvlkll
      481 qtttpelrqi lvfiwtkila ldkscqvdlv kdgghvyfir flnsaeaype qramaafvla
      541 vivdghrrgq eacieagliq vclkqlhgft qneaqtepll lqwlclclgk lwedfteaqt
      601 iglqadvpai caplhsepqp evrasavyal atlldvgfds frdgiggdee cddveknrae
      661 miiiksllnv vsdgsplvra evavalahfa fghkqhlksi aaaywkpqpn sllnslpsla
      721 nikgtgsgni vssqigplta mvrdgrvsts splatagimh gsplsddssq lsdsgilndg
      781 vsngevnhsr pkpldnamys qcvlamftla rdpsprvasl grrvlsiigi eqvtksvkpa
      841 gnsawpsdpa nssstpsisg larssswldi ngghmaltfr tppvspprqn ylagirrvcs
      901 ldfrphlmns pdsgladpll gsasgsersl lpqstiynfs cghfcksllt asddseella
      961 kreeqerfal ehiakcqhss vsklnnnsqi aswdtrfetg trtallqpfs piviaadene
     1021 rirvwnyeea tllngfdnhd fpekgisklc llnelddsll lvassdgnir iwkdytlrgk
     1081 qkhvtafssi qghkpgmrsl navvdwqqqs gylyasgeis simlwdldke qlvnsipsss
     1141 dcsvsalass qvhagqfaag fvdgsvrlyd irtpdmlvrt trphtqqvar vvgigfqpgl
     1201 dqgkivsasq agdiqfldir sqrdtdltid ahrgsltala vhrhapiias gsakqlikvf
     1261 slkgeqlgti ryqhtfmaqk igsvscltfh pyqvllaaga adacvsiyad dnshtr
//
LOCUS       XP_040943853            1210 aa            linear   PLN 06-AUG-2024
DEFINITION  regulatory-associated protein of TOR 1 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943853
VERSION     XP_040943853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087919.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1210
                     /product="regulatory-associated protein of TOR 1 isoform
                     X3"
                     /calculated_mol_wt=133143
     Region          111..262
                     /region_name="Raptor_N"
                     /note="Raptor N-terminal CASPase like domain; pfam14538"
                     /db_xref="CDD:464202"
     Region          1047..>1199
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1085..1127
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1135..1176
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1210
                     /gene="LOC107903529"
                     /coded_by="XM_041087919.1:540..4172"
                     /db_xref="GeneID:107903529"
ORIGIN      
        1 malgdlmtsr fsqlslavsn hvidgnvssg gyheddvays dlmsqrrdld aastssyana
       61 vtstasvptt maylpqtvvl celrhaafea stptgpsdsg lvskwrpkdr mktgcvalvl
      121 clnisvdppd vikispcarm ecwtdpfsma pqkaletigk nlrdqyerwq pkarskveld
      181 ptvdevkklc ntcrryakse rvlfhynghg vpkptangei wlfnksytqy iplpisdlds
      241 wlktpsiyvf dcsaagmvvn afielldcgt snypgssrdc illaaceahe tlpqsaefpa
      301 dvftsclttp ikmalrwfct rsllheslds slidkipgrq ndrktllgel nwiftavtdt
      361 iawnvlphdl frrlfrqdll vaslfrnfll aerimrsanc spisypmlpp thqhhmwdaw
      421 dmaaeiclsq lpslvedpna efqpssffte qliafevwld hgsehkkppe qlpivlqvll
      481 sqchrfralv llgrfldmgp wavdlalsvg ifpyvlkllq tttpelrqil vfiwtkilal
      541 dkscqvdlvk dgghvyfirf lnsaeaypeq ramaafvlav ivdghrrgqe acieagliqv
      601 clkqlhgftq neaqteplll qwlclclgkl wedfteaqti glqadvpaic aplhsepqpe
      661 vrasavyala tlldvgfdsf rdgiggdeec ddveknraem iiiksllnvv sdgsplvrae
      721 vavalahfaf ghkqhlksia aaywkpqpns llnslpslan ikgtgsgniv ssqigpltam
      781 vrdgrvstss platagimhg splsddssql sdsgilndgv sngevnhsrp kpldnamysq
      841 cvlamftlar dpsprvaslg rrvlsiigie qvtksvkpag nsawpsdpan ssstpsisgl
      901 arssswldin gghmaltfrt ppvspprqny lagirrvcsl dfrphlmnsp dsgladpllg
      961 sasgsersll pqstiynfsc ghfcksllta sddseellak reeqerfale hiakcqhssv
     1021 sklnnnsqia swdtrfetgt rtallqpfsp iviaadener irvwnyeeat llngfdnhdf
     1081 pekgisklcl lnelddslll vassdgniri wkdytlrgkq khvtafssiq ghkpgmrsln
     1141 avvdwqqqsg ylyasgeiss imlwdldkeq lvnsipsssd csvsalagsh nqaaystssk
     1201 scgywlstrt
//
LOCUS       XP_016685083             675 aa            linear   PLN 06-AUG-2024
DEFINITION  TOM1-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_016685083
VERSION     XP_016685083.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829594.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685083.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..675
                     /product="TOM1-like protein 6"
                     /calculated_mol_wt=73204
     Region          16..142
                     /region_name="VHS"
                     /note="VHS (Vps27/Hrs/STAM) domain family; cd03561"
                     /db_xref="CDD:340765"
     Site            order(29..30,33,37,77..78)
                     /site_type="other"
                     /note="putative intraprotein/interprotein binding site
                     [polypeptide binding]"
                     /db_xref="CDD:340765"
     Region          200..274
                     /region_name="GAT_GGA-like_plant"
                     /note="canonical GAT domain found in uncharacterized
                     Golgi-localized gamma ear-containing Arf-binding protein
                     (GGA)-like proteins mainly found in plants; cd14231"
                     /db_xref="CDD:410579"
     Site            order(202..203,205..206,209..210,213,226,229..230)
                     /site_type="other"
                     /note="putative ubiquitin binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410579"
     Region          <279..618
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..675
                     /gene="LOC107903521"
                     /coded_by="XM_016829594.2:391..2418"
                     /db_xref="GeneID:107903521"
ORIGIN      
        1 mmmmssasss aatvavdkat sdllmgpdwt mnidicdsvn snhwpakdvv kavkrrlqhk
       61 sskvqllalt lletmvkncg dyvhfqiaer nilgemvkiv kkkadmlvrd kilalldswq
      121 eafggpggkh pqyywaydel rrsgvefpkr ssntapiftp pathptlnpg ygmpsnssrr
      181 ldetmateie slslssldsm kdvvellsdm lqavnpshsa avkdevivdl vnrcrsnqkk
      241 lmqmltttvd eellarglel ndglqsllak hdaialgspl pveatavspm hneasssnks
      301 seakspapni spptpvatvt kshideeeee eddfaqlarr hsraqftspq naspgtseat
      361 apvsnanvtt wytptastsi psnalalpdp papvktskeq dlidllsltl stttasspha
      421 pptppsasqh qvpvppssqg ypyasqtypa sqaqlpynsy vvpwaqpqkp sqpqvqpqpt
      481 qfqtepqaqn qlnspsqaqh qfqarsqphq lntqsqirlq pqspsqsqsp hqsfgqpqyq
      541 pyfrpqytsa yppppwaatp gyfnsqnhrs stnnmistpq vnttasnsit gprplqhnrs
      601 fpirgtngga pmnggdswti tgprnpapts gqkpfipsyl lfedlnvlgn gdgrrsstsp
      661 nlsgsntqsm vggrk
//
LOCUS       XP_016685073             350 aa            linear   PLN 06-AUG-2024
DEFINITION  2-alkenal reductase (NADP(+)-dependent) [Gossypium hirsutum].
ACCESSION   XP_016685073
VERSION     XP_016685073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829584.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="2-alkenal reductase (NADP(+)-dependent)"
                     /calculated_mol_wt=38465
     Region          11..347
                     /region_name="double_bond_reductase_like"
                     /note="Arabidopsis alkenal double bond reductase and
                     leukotriene B4 12-hydroxydehydrogenase; cd08295"
                     /db_xref="CDD:176255"
     Site            order(61..62,143,147,168,170..174,192..193,197,213,
                     237..238,259..263,265,289..291,334..335,339,341)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176255"
     Site            order(62,87,265,291)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176255"
     Site            order(65,253,258..259,261,276..281,283..290,293)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:176255"
     CDS             1..350
                     /gene="LOC107903511"
                     /coded_by="XM_016829584.2:64..1116"
                     /db_xref="GeneID:107903511"
ORIGIN      
        1 madgseknav vsnkkvifkd yvsgfpkesd mavtvdenlk lkvagdsqgi lvknlylscd
       61 pymrllmtnr sseifgtytp gapitgfgvg kvidsrnpef kegdlvwgit gweeysllts
      121 seglfkihht diplsyytgi lgmpgltayg gfyevcapkk geyvfvsaas gavgqlvgqf
      181 aklmgcyvvg sagtqdkvel lknkfgfdda fnykeesdln aalkryfpeg iniyfenvgg
      241 kmldavilnm rvhgriaacg misqynrdqp egvqnlmsiv ykrvriegfa vfdyypqysk
      301 fldfilpyir egkvkyvedi veglengpaa liglfsgrnv gkqvvviapq
//
LOCUS       XP_016685065             350 aa            linear   PLN 06-AUG-2024
DEFINITION  2-alkenal reductase (NADP(+)-dependent) [Gossypium hirsutum].
ACCESSION   XP_016685065
VERSION     XP_016685065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829576.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="2-alkenal reductase (NADP(+)-dependent)"
                     /calculated_mol_wt=38445
     Region          11..347
                     /region_name="double_bond_reductase_like"
                     /note="Arabidopsis alkenal double bond reductase and
                     leukotriene B4 12-hydroxydehydrogenase; cd08295"
                     /db_xref="CDD:176255"
     Site            order(61..62,143,147,168,170..174,192..193,197,213,
                     237..238,259..263,265,289..291,334..335,339,341)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176255"
     Site            order(62,87,265,291)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176255"
     Site            order(65,253,258..259,261,276..281,283..290,293)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:176255"
     CDS             1..350
                     /gene="LOC107903502"
                     /coded_by="XM_016829576.2:55..1107"
                     /db_xref="GeneID:107903502"
ORIGIN      
        1 madgseknav vinkkvifkd yvsgfpkesd mavtvdenlt lkvagdskgi lvknlylscd
       61 pymrlsmtnr sseifgtytp gapitgfgvg kvidsrnpef kegdlvwglt gweeysllks
      121 seglfkihht diplsyyigi lgmpgltayg gfyevcapkk geyvlvsaas gavgqlvgqf
      181 aklmgcyvvg sagtqdkvel lknkfgfdda fnykeepdln aalkryfpeg idiyfenvgg
      241 kmldavilnm rvhgriavcg misqynrdqp egvhnlmsiv ykrvriegfa tvdyypqysk
      301 fldfilpyir egkvkyvedi veglengpaa iiglfsgrnv gkqvvviapq
//
LOCUS       XP_016685046             329 aa            linear   PLN 06-AUG-2024
DEFINITION  2-alkenal reductase (NADP(+)-dependent) [Gossypium hirsutum].
ACCESSION   XP_016685046
VERSION     XP_016685046.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829557.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685046.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..329
                     /product="2-alkenal reductase (NADP(+)-dependent)"
                     /calculated_mol_wt=36238
     Region          9..318
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(57..59,62,140,144,165..166,168..169,171..172,
                     190..191,195,211,235..236,257..258,287..289)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176255"
     CDS             1..329
                     /gene="LOC107903492"
                     /coded_by="XM_016829557.2:79..1068"
                     /db_xref="GeneID:107903492"
ORIGIN      
        1 matggmdeas nmkvvlkhyv sgspqetdmh ltagtiklkv pkdsnsiilk nlylscdpsm
       61 ifkmmklerq ltdpyvlgsp itgygvakvl dsahpgfakd dlvwgitgwe eyslisdpkn
      121 ffkiqhtdvp lsyyagilgm pgitanigfy elcapkkgdy vfvsaaacga vgqlvgqfak
      181 lhgchvvgsa gspekvnilk skfgfdeafn ykdepnfdat lkrhcpegid iyfdnvggkm
      241 ldavllnlrp hariavcgmi sqynreqpdg iqnlssivsk earmqgylat nyyhlypkyl
      301 emilplikes kvvyvedvdt ifwmetgst
//
LOCUS       XP_016685036             347 aa            linear   PLN 06-AUG-2024
DEFINITION  2-alkenal reductase (NADP(+)-dependent) [Gossypium hirsutum].
ACCESSION   XP_016685036
VERSION     XP_016685036.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016685036.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="2-alkenal reductase (NADP(+)-dependent)"
                     /calculated_mol_wt=38535
     Region          7..344
                     /region_name="double_bond_reductase_like"
                     /note="Arabidopsis alkenal double bond reductase and
                     leukotriene B4 12-hydroxydehydrogenase; cd08295"
                     /db_xref="CDD:176255"
     Site            order(58..59,140,144,165,167..171,189..190,194,210,
                     234..235,256..260,262,286..288,331..332,336,338)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176255"
     Site            order(59,84,262,288)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176255"
     Site            order(62,250,255..256,258,273..278,280..287,290)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:176255"
     CDS             1..347
                     /gene="LOC107903483"
                     /coded_by="XM_016829547.2:233..1276"
                     /db_xref="GeneID:107903483"
ORIGIN      
        1 madealvknk qvvlknyvna glpkesdmei keksiqlkvp egtkdsilvk nlylscdpym
       61 rnrmkkleds yvpsfepgsa isgygvakvv dsthpeykng dlvwgmtgwe eyslltvpgl
      121 lfkiqhtdvp ltyytgllgm agmtayagfy eictpkkgey vyvsaasgav gqlvgqfakl
      181 lgcyvvgsag skekidllkn kfgfdeafny keepdldaal kryfpegidi yfenvggkml
      241 davllnmrvh griavcgmis qynndkpeat hnlmyiipkr vrmqgfivsd fyhlypkyle
      301 mvipsikegk ikyiedvaeg iesaptalig lfigrnvgkq lvvvsrd
//
LOCUS       XP_016685024             479 aa            linear   PLN 06-AUG-2024
DEFINITION  acetolactate synthase small subunit 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016685024
VERSION     XP_016685024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829535.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..479
                     /product="acetolactate synthase small subunit 2,
                     chloroplastic"
                     /calculated_mol_wt=52674
     Region          76..228
                     /region_name="ilvH"
                     /note="acetolactate synthase 3 regulatory subunit;
                     Reviewed; PRK11895"
                     /db_xref="CDD:183365"
     Region          310..477
                     /region_name="ilvH"
                     /note="acetohydroxyacid synthase small subunit; CHL00100"
                     /db_xref="CDD:214364"
     CDS             1..479
                     /gene="LOC107903474"
                     /coded_by="XM_016829535.2:59..1498"
                     /db_xref="GeneID:107903474"
ORIGIN      
        1 maalstvphl qihcsktesd svhkpitfps ktirpiihvp rklvfspksv ddkisnsnfl
       61 angpvpstpt rskvrrhtis vfvgdesgmi nriagvfarr gynieslavg lnkdkalfti
      121 vvsgtdrvlq qvveqlqklv nvwkvedlsn epqverelml ikvnadpkfr aeimwlvdif
      181 rakivdiseh sltievtgdp gkmvavqrnl skfgikeiar tgkialrrek mgasapfwrf
      241 saasypdlee tvpdnalaga rkqsvfsead vsgggdvypv espdgftinq vldahwgvlt
      301 dedtsghqsh tlsmlvndsp gvlnlvtgvf arrgynlqsl avghaevegl srittvvpgt
      361 desisklvqq lyklvdmhev rdltqlpfae relmlikiav naaarrdvld ianifrakav
      421 dvsdhtvtle ltgdldkmva lqrllepygi cevartgrla lvresgvdsr ylrgyslpl
//
LOCUS       XP_016685005             536 aa            linear   PLN 06-AUG-2024
DEFINITION  integrin-linked protein kinase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016685005
VERSION     XP_016685005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829516.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..536
                     /product="integrin-linked protein kinase 1 isoform X1"
                     /calculated_mol_wt=60936
     Region          <78..>166
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          78..104
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(79..80,83..85,87..88,92,95,104,106,108,112..113,
                     116..118,120..121,125,128,137,139,141,145..146,149..151,
                     153..154,158,161)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          139..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..453
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(200..203,207,216,218,250,266..269,315,319..320,322,
                     332..333)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..536
                     /gene="LOC107903460"
                     /coded_by="XM_016829516.2:317..1927"
                     /db_xref="GeneID:107903460"
ORIGIN      
        1 mkmenlasql krgisrqfst gslkrslsrq fsrqssldpr rnnlrfsfgr qssldpirrr
       61 nsedemsvpe nldstmqllf macrgdvkgv edllnggidv nsidldgrta lhiaaceghv
      121 evvklllsrn anidardrwg staaadakyy gnvevyeilk argakvpktr ktpmtvanpq
      181 evpeyelnpm elqirksdgi tkgsyqvakw ngtrvsvkif dkdsysdpes inafkyeltl
      241 lekvrhpnvv qfvgavtqni pmmivseyha kgnfqnylqk kgrlstskvl rfavdiargm
      301 nylheckpdp iihcnlqpkn vlldnggklk iagfgllrls klsadkakla rpddqldpsn
      361 iymapeihkd mifdrgvday sfgvmlyemi eggvpfhpkp aeeavklmcf eqkrpplkik
      421 skscpwelre ligecwdqep lirptfseii vrlerivasc tkqgwwkdtf klpclllqem
      481 rgnlsslgks knqtriswev pilissfqtf ifeivcykld lnkilnhvhi krkkkr
//
LOCUS       XP_016685013             475 aa            linear   PLN 06-AUG-2024
DEFINITION  integrin-linked protein kinase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016685013
VERSION     XP_016685013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829524.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..475
                     /product="integrin-linked protein kinase 1 isoform X2"
                     /calculated_mol_wt=53810
     Region          <78..>166
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          78..104
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(79..80,83..85,87..88,92,95,104,106,108,112..113,
                     116..118,120..121,125,128,137,139,141,145..146,149..151,
                     153..154,158,161)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          139..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..453
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(200..203,207,216,218,250,266..269,315,319..320,322,
                     332..333)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..475
                     /gene="LOC107903460"
                     /coded_by="XM_016829524.2:317..1744"
                     /db_xref="GeneID:107903460"
ORIGIN      
        1 mkmenlasql krgisrqfst gslkrslsrq fsrqssldpr rnnlrfsfgr qssldpirrr
       61 nsedemsvpe nldstmqllf macrgdvkgv edllnggidv nsidldgrta lhiaaceghv
      121 evvklllsrn anidardrwg staaadakyy gnvevyeilk argakvpktr ktpmtvanpq
      181 evpeyelnpm elqirksdgi tkgsyqvakw ngtrvsvkif dkdsysdpes inafkyeltl
      241 lekvrhpnvv qfvgavtqni pmmivseyha kgnfqnylqk kgrlstskvl rfavdiargm
      301 nylheckpdp iihcnlqpkn vlldnggklk iagfgllrls klsadkakla rpddqldpsn
      361 iymapeihkd mifdrgvday sfgvmlyemi eggvpfhpkp aeeavklmcf eqkrpplkik
      421 skscpwelre ligecwdqep lirptfseii vrlerivasc tkqgwwkdtf klpwk
//
LOCUS       XP_016684984             691 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2 [Gossypium
            hirsutum].
ACCESSION   XP_016684984
VERSION     XP_016684984.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829495.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684984.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..691
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2"
                     /calculated_mol_wt=79499
     Region          44..87
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          433..530
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          579..661
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..691
                     /gene="LOC107903443"
                     /coded_by="XM_016829495.2:629..2704"
                     /db_xref="GeneID:107903443"
ORIGIN      
        1 mdnfdqklgp effknlsaea vtplnvvhee iyessskrpk ttskvwdife klpaqqgdsk
       61 aicklcrriy takttsgtsh lrrhieacvk rgnhevdqrs ieacfkpvkr nanrltlshd
      121 tliaattslq nykldvdeih raiammiivd eqpfsvveda gfrrllsaac pefpvlsrss
      181 ikrdiisiyv kerenirell atcpgriclt sstwksdsdd hfscvtthfi dhewrlqrri
      241 lrfklmpppy dslsvadeia lcmvqwnieh kvfsvtlenl ssddcvadml rsrlaakkyl
      301 pckgvffhvs cffrilnsiv qaglnlvvdi iaklrlgiky vqqsphrkkn fyiiaktlnl
      361 dtqrklcldt parwnstynm vevafcykna fvylaeqdkn flhklsedew ekmsvlykfl
      421 kvfyevtcvf frnrqptsnl yfkaawkvhs rlfdmvrgpe nfmthmvrem hsklnqywsa
      481 ynlilscaai ldprykikfv eycytklygs gaqkyvsvsv ntlyglfdey mqnsarpsqt
      541 tllstaaski sndkdnndgf edyetfqsar frtqveksql dlyleepshd lnseidvley
      601 wtlcslrype lskmardvlt ipvstiasds afdispqvis tdrsslkpkm lqslvclqdw
      661 mlasdrtrgl gsmeskpedd sssssdgddd y
//
LOCUS       XP_016684993             462 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 74F2 [Gossypium hirsutum].
ACCESSION   XP_016684993
VERSION     XP_016684993.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829504.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684993.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="UDP-glycosyltransferase 74F2"
                     /calculated_mol_wt=51845
     Region          1..457
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,163,166..167,171,230,284,354,356,358..359,
                     362)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,284,354,356,358..359)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..462
                     /gene="LOC107903453"
                     /coded_by="XM_016829504.2:123..1511"
                     /db_xref="GeneID:107903453"
ORIGIN      
        1 mekkannrgh vlvipyptqg hinpmlqfsk rlsskglkat fattvfiset mkpellnsdi
       61 dfdtisdgcd egrffevrsi ddylvrlqtv gsktltelii khknsprpid cilydaflpw
      121 vldvaqqfgi vgiafftqac avnyiyyyar ngllslpiss smmpivipgl plldlrdmps
      181 fiyvvgsyps yfelvlnqfs niakadfilv ntfykleqev vdsmskvmsq plltigptip
      241 smyldkrlen dkdydlnlfk ldstntcwlt tkppcsvvyv sfgslanlts dqmkelsrgl
      301 kqagfhflwv vrsselpkvp hgfieemgdk alivtwipqt evlaneaigc ffthcgwnst
      361 iealclgvpm vampqwtdqt tdaklvedvw kvgvrvnvre dgivsgdeie rcirqvmege
      421 qgiemkrnam kwkelaveav ceggssdkni delvskilar ck
//
LOCUS       XP_016684977             462 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 74F2 [Gossypium hirsutum].
ACCESSION   XP_016684977
VERSION     XP_016684977.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829488.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684977.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="UDP-glycosyltransferase 74F2"
                     /calculated_mol_wt=51685
     Region          1..457
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,171,174..175,179,230,284,354,356,358..359,
                     362)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,284,354,356,358..359)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..462
                     /gene="LOC107903435"
                     /coded_by="XM_016829488.2:141..1529"
                     /db_xref="GeneID:107903435"
ORIGIN      
        1 mekkankrvh vlvipypsqg hinpmlqfsk rlsskglkat fattvfiset mkpellnsdi
       61 dfdtisdgcd eggflevgsv ddylvrlqtv gsktltelii khknsphpid cilydaflpw
      121 vldvaqqfgi vgiafftqac avdyiyycah nghlslpiss smmpivipgl plldlrdmps
      181 fiyvegsyps yfelvlnqfs nidkvdfilv nsfykleqev vdsmskvmtq plltigptip
      241 smyldkrlen dkdydlnlfk ldsngtcwlt nkppcsvvyv sfgsmanlti dqmkelargl
      301 kqtgfhflwv vrsselpkvp hgfieemgdk alivtwipqt evlaneaigc ffthcgwnst
      361 iealclgvpm vampqwtdqt tdaklvedvw kvgvrvnvre dgivsgdeie rcirqvmege
      421 qgietkrnam kwkelaveav ceggssdkni demvskilar ck
//
LOCUS       XP_016684965             462 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 74F2 [Gossypium hirsutum].
ACCESSION   XP_016684965
VERSION     XP_016684965.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829476.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684965.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="UDP-glycosyltransferase 74F2"
                     /calculated_mol_wt=51714
     Region          1..457
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(20..21,23,163,166..167,171,230,284,354,356,358..359,
                     362)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(20,284,354,356,358..359)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            21
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..462
                     /gene="LOC107903426"
                     /coded_by="XM_016829476.2:101..1489"
                     /db_xref="GeneID:107903426"
ORIGIN      
        1 mekkankrgh vlvipystqg hinpmlqfsk rlsskglkat fattvfiset mkpellnsei
       61 dfdtisdgcd kdgffalgdi ddylvrlqtv gsktltelii khknsphpid cilydaflpw
      121 vldvaqqfgi vgiafftqsc avdyiyyyvh ngllslpiss smmpivipgl plldlrdmps
      181 fiyvvgsyps hfklvlnqfs nidkadfilv ntfykleqev vdsmskvmsq plltigptip
      241 smyldkrlen dkdydlnlfk ldststcwlt tkppcsvvyv sfgslvnlts dqmkelargl
      301 kqtgfyflwv vrsselpkvp hgfieemgdk alivtwipqt evlaneaigc ffthcgwnst
      361 iealclgvpi vampqwadqt tdamlvedvw kvgvrvnvre dgivsgdeie rcirqvmege
      421 qgietkrnam kwkelaveav ceggssdkni demvskilar ck
//
LOCUS       XP_016684951             411 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-splicing factor CWC25 homolog [Gossypium hirsutum].
ACCESSION   XP_016684951
VERSION     XP_016684951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..411
                     /product="pre-mRNA-splicing factor CWC25 homolog"
                     /calculated_mol_wt=47496
     Region          11..46
                     /region_name="Cir_N"
                     /note="N-terminal domain of CBF1 interacting co-repressor
                     CIR; pfam10197"
                     /db_xref="CDD:462992"
     Region          <17..>351
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          65..160
                     /region_name="CWC25"
                     /note="Pre-mRNA splicing factor; pfam12542"
                     /db_xref="CDD:463626"
     CDS             1..411
                     /gene="LOC107903419"
                     /coded_by="XM_016829462.2:263..1498"
                     /db_xref="GeneID:107903419"
ORIGIN      
        1 malkflnkkg whtgslrnie nvwkaeqkhe aeqkkleelr kqiheerers efrllqeqag
       61 lvpkqerldf lydsglavgk gasssaaggs ggggfkalee alpgskagtd gnanqssapg
      121 alfedkphsa ndtwrklhsd pllmirqreq ealariknnp vqmamirksv vdkkqkeksp
      181 dhkehrkkhh cssskhrkhs sskrhsysed dtskedkkdk nhhrkrsdye ghyrrtesds
      241 ehelketere ekshrrqkyg yddqdvdkrs hdkskrdkys sqaprsidad knqekdrrsy
      301 dhrdtgprdn krrgvshkls eeeraarlre mqedaelhee qrwkrlkkae endareatls
      361 stsvgknfld aanrsiygae kggsstiees vrrrahysqg ryesernafr r
//
LOCUS       XP_016684916             398 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and TAZ domain-containing protein 3 [Gossypium hirsutum].
ACCESSION   XP_016684916
VERSION     XP_016684916.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829427.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684916.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="BTB/POZ and TAZ domain-containing protein 3"
                     /calculated_mol_wt=44856
     Region          90..189
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          193..>236
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cd14733"
                     /db_xref="CDD:350515"
     Region          271..361
                     /region_name="ZnF_TAZ"
                     /note="TAZ zinc finger, present in p300 and CBP;
                     smart00551"
                     /db_xref="CDD:214717"
     CDS             1..398
                     /gene="LOC107903398"
                     /coded_by="XM_016829427.2:210..1406"
                     /db_xref="GeneID:107903398"
ORIGIN      
        1 maspvtdsag lsplietvsw nadavgtlsm peaeapmsss vlnscnipkp pplpskivtr
       61 nkhpkwppgs cfvpketkdm wdklfkdgng adlciftedk scifahssvl siaspvlgyr
      121 irqskikhgm kyiqipglph davlvfirfl ysscyeeeel kkyalhllll shccsvpqlk
      181 rvcicyleqd flttenvidt lllarkcdap rlvlicvrmv vknfksvsst egwklmkriy
      241 pdieqelves vveadskkee sqrkieekkv ytqlyeamea llhickdgcr tigprdkmlk
      301 gnqiacnfpa ckglealvrh fsgcktrvpg gcghckrmwq llelhsrmcn epdsckvplc
      361 rhfkekiqqq ckkdetkwkl lvnkviaakn gsylfssr
//
LOCUS       XP_016684926             398 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and TAZ domain-containing protein 3 [Gossypium hirsutum].
ACCESSION   XP_016684926
VERSION     XP_016684926.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829437.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684926.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="BTB/POZ and TAZ domain-containing protein 3"
                     /calculated_mol_wt=44856
     Region          90..189
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          193..>236
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cd14733"
                     /db_xref="CDD:350515"
     Region          271..361
                     /region_name="ZnF_TAZ"
                     /note="TAZ zinc finger, present in p300 and CBP;
                     smart00551"
                     /db_xref="CDD:214717"
     CDS             1..398
                     /gene="LOC107903398"
                     /coded_by="XM_016829437.2:215..1411"
                     /db_xref="GeneID:107903398"
ORIGIN      
        1 maspvtdsag lsplietvsw nadavgtlsm peaeapmsss vlnscnipkp pplpskivtr
       61 nkhpkwppgs cfvpketkdm wdklfkdgng adlciftedk scifahssvl siaspvlgyr
      121 irqskikhgm kyiqipglph davlvfirfl ysscyeeeel kkyalhllll shccsvpqlk
      181 rvcicyleqd flttenvidt lllarkcdap rlvlicvrmv vknfksvsst egwklmkriy
      241 pdieqelves vveadskkee sqrkieekkv ytqlyeamea llhickdgcr tigprdkmlk
      301 gnqiacnfpa ckglealvrh fsgcktrvpg gcghckrmwq llelhsrmcn epdsckvplc
      361 rhfkekiqqq ckkdetkwkl lvnkviaakn gsylfssr
//
LOCUS       XP_040943855             398 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and TAZ domain-containing protein 3 [Gossypium hirsutum].
ACCESSION   XP_040943855
VERSION     XP_040943855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087921.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="BTB/POZ and TAZ domain-containing protein 3"
                     /calculated_mol_wt=44856
     Region          90..189
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          193..>236
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cd14733"
                     /db_xref="CDD:350515"
     Region          271..361
                     /region_name="ZnF_TAZ"
                     /note="TAZ zinc finger, present in p300 and CBP;
                     smart00551"
                     /db_xref="CDD:214717"
     CDS             1..398
                     /gene="LOC107903398"
                     /coded_by="XM_041087921.1:111..1307"
                     /db_xref="GeneID:107903398"
ORIGIN      
        1 maspvtdsag lsplietvsw nadavgtlsm peaeapmsss vlnscnipkp pplpskivtr
       61 nkhpkwppgs cfvpketkdm wdklfkdgng adlciftedk scifahssvl siaspvlgyr
      121 irqskikhgm kyiqipglph davlvfirfl ysscyeeeel kkyalhllll shccsvpqlk
      181 rvcicyleqd flttenvidt lllarkcdap rlvlicvrmv vknfksvsst egwklmkriy
      241 pdieqelves vveadskkee sqrkieekkv ytqlyeamea llhickdgcr tigprdkmlk
      301 gnqiacnfpa ckglealvrh fsgcktrvpg gcghckrmwq llelhsrmcn epdsckvplc
      361 rhfkekiqqq ckkdetkwkl lvnkviaakn gsylfssr
//
LOCUS       XP_016684935             398 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and TAZ domain-containing protein 3 [Gossypium hirsutum].
ACCESSION   XP_016684935
VERSION     XP_016684935.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829446.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684935.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="BTB/POZ and TAZ domain-containing protein 3"
                     /calculated_mol_wt=44856
     Region          90..189
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          193..>236
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cd14733"
                     /db_xref="CDD:350515"
     Region          271..361
                     /region_name="ZnF_TAZ"
                     /note="TAZ zinc finger, present in p300 and CBP;
                     smart00551"
                     /db_xref="CDD:214717"
     CDS             1..398
                     /gene="LOC107903398"
                     /coded_by="XM_016829446.2:125..1321"
                     /db_xref="GeneID:107903398"
ORIGIN      
        1 maspvtdsag lsplietvsw nadavgtlsm peaeapmsss vlnscnipkp pplpskivtr
       61 nkhpkwppgs cfvpketkdm wdklfkdgng adlciftedk scifahssvl siaspvlgyr
      121 irqskikhgm kyiqipglph davlvfirfl ysscyeeeel kkyalhllll shccsvpqlk
      181 rvcicyleqd flttenvidt lllarkcdap rlvlicvrmv vknfksvsst egwklmkriy
      241 pdieqelves vveadskkee sqrkieekkv ytqlyeamea llhickdgcr tigprdkmlk
      301 gnqiacnfpa ckglealvrh fsgcktrvpg gcghckrmwq llelhsrmcn epdsckvplc
      361 rhfkekiqqq ckkdetkwkl lvnkviaakn gsylfssr
//
LOCUS       XP_016752513             235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016752513
VERSION     XP_016752513.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016897024.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016752513.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..235
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27712
     CDS             1..235
                     /gene="LOC107960732"
                     /coded_by="XM_016897024.2:267..974"
                     /db_xref="GeneID:107960732"
ORIGIN      
        1 mgrrqprlnd ldlsttsllq nfigcfnwgn rdksryihml eelkqieekk ekaladfaqn
       61 pnifnsstlr naieeqikiv kkislelrie qhevkstieg lekelipmke evfvyydqrr
      121 emlkqkeaaq ycisklrqtf vemngmydey vsllsnakel arnkdvaalr klshqqveef
      181 msewnhpyvk tfkinyefsi lpslsdrwln ndgrigfgdd dretlryied icsin
//
LOCUS       XP_040943856             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943856
VERSION     XP_040943856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087922.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..104
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12117
     CDS             1..104
                     /gene="LOC121214400"
                     /coded_by="XM_041087922.1:1029..1343"
                     /db_xref="GeneID:121214400"
ORIGIN      
        1 mgrsqprlnd ldlsttsllq nfngmhdeyi sllsndkelv rnkngaalrk lshqqveefm
       61 sewnhsyvkt frincefsil rslsdrqlsn ngriefrddd reil
//
LOCUS       XP_016684907              91 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM36B [Gossypium hirsutum].
ACCESSION   XP_016684907
VERSION     XP_016684907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829418.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..91
                     /product="sm-like protein LSM36B"
                     /calculated_mol_wt=9751
     Region          14..81
                     /region_name="LSm6"
                     /note="Like-Sm protein 6; cd01726"
                     /db_xref="CDD:212473"
     Site            order(19,22..23,28,30..32,35,37,42..45,48..49,51,69..81)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212473"
     Site            order(27..33,35..47,49..53)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212473"
     Site            order(45,47,73)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212473"
     Site            69..80
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212473"
     CDS             1..91
                     /gene="LOC107903391"
                     /coded_by="XM_016829418.2:178..453"
                     /db_xref="GeneID:107903391"
ORIGIN      
        1 msttgekgsa ttktpadflk sirgrpvvvk lnsgvdyrgi lacldgymni ameqteeyvn
       61 gqlknkygda firgnnvlyi stskrtladg a
//
LOCUS       XP_040943857              91 aa            linear   PLN 06-AUG-2024
DEFINITION  sm-like protein LSM36B [Gossypium hirsutum].
ACCESSION   XP_040943857
VERSION     XP_040943857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087923.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..91
                     /product="sm-like protein LSM36B"
                     /calculated_mol_wt=9751
     Region          14..81
                     /region_name="LSm6"
                     /note="Like-Sm protein 6; cd01726"
                     /db_xref="CDD:212473"
     Site            order(19,22..23,28,30..32,35,37,42..45,48..49,51,69..81)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212473"
     Site            order(27..33,35..47,49..53)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212473"
     Site            order(45,47,73)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212473"
     Site            69..80
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212473"
     CDS             1..91
                     /gene="LOC107903391"
                     /coded_by="XM_041087923.1:137..412"
                     /db_xref="GeneID:107903391"
ORIGIN      
        1 msttgekgsa ttktpadflk sirgrpvvvk lnsgvdyrgi lacldgymni ameqteeyvn
       61 gqlknkygda firgnnvlyi stskrtladg a
//
LOCUS       XP_016684894             931 aa            linear   PLN 06-AUG-2024
DEFINITION  formin-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016684894
VERSION     XP_016684894.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684894.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..931
                     /product="formin-like protein 2"
                     /calculated_mol_wt=102919
     Region          477..881
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..931
                     /gene="LOC107903384"
                     /coded_by="XM_016829405.2:334..3129"
                     /db_xref="GeneID:107903384"
ORIGIN      
        1 mimlitkard fvvlfvllff savltaecfe yhrrllhqpf fpvtsqppvy ppsssspfps
       61 pepqphlkqq pkypfsttpp stphspffls fpspppppsq pstlptfpan isslliphsp
      121 spsshrrhll lislssalla aaiifslavl tlflrhrshq ntssddkasr sdslrlfppn
      181 ippsdasqkp ptpqppphqq pqqppryvst nrsseflylg tlvntrvdaa katvssnggi
      241 klgvssppyq klgspelnpl pplpkvqtfq sgeqflqsps mrcfentiev eedeffsprg
      301 sshgkesppp ppqqppqppp qepvvrvess srrefngdny gsrsfnsrta sypysnscsp
      361 snsflnsspp sqrstvvpiy tvqiknpsst spsssrlsss sseryspdgs ssfsaqnkes
      421 psrvvhkklp ppppplpppc fwevpaaknp epggppvlva psrpvvlqnn esidnttaet
      481 pkpklkplhw dkvrassdra mvwdqikass fqlneemiet lftannlnsa tkengrrqsl
      541 psvnqenrvl dpkksqnlai llralnvtie evcealmegn sdtlgtelle sllkmaptne
      601 eerklkdftd espfklgpae kflkavldip fafkrvdaml yianfdseie ylkrsfetle
      661 aacgelrnsk mflklleavl ktgnrmnvgt nrgdahafkl dtllklvdvk gtdgkttllh
      721 fvvqeiirae gsrlsnanqn pkaekiqqsd lqddvefrkl glevvsglsg eltnvkkaaa
      781 mdsdvlsidv aklatgiski reviklneev alkdssrkfs esmneflkka eeeiikiqaq
      841 drvallmvke iteyfhgnst keeahpfrif mvvrdflsil dqvckevakv nertiyssar
      901 plpnpipppv fpglntqhys ssddetssfs s
//
LOCUS       XP_016684882             173 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684882
VERSION     XP_016684882.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684882.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18676
     CDS             1..173
                     /gene="LOC107903374"
                     /coded_by="XM_016829393.2:100..621"
                     /db_xref="GeneID:107903374"
ORIGIN      
        1 mgfsinnsvt qshtrthktf liasyfllgt asgcifltls lrllpslcgf ffillhaiti
       61 agavtgcsva vsgsnrfyaa hmvvmvltsi fqgsvsvlil trssdflgyl ksyvreddgi
      121 vilklvgglc vtvfclewmv lglgfvlryy afveghegvv nggqyqrngk vqv
//
LOCUS       XP_016684860             892 aa            linear   PLN 06-AUG-2024
DEFINITION  ion channel CASTOR isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016684860
VERSION     XP_016684860.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829371.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684860.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..892
                     /product="ion channel CASTOR isoform X1"
                     /calculated_mol_wt=99206
     Region          264..586
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          501..598
                     /region_name="Castor_Poll_mid"
                     /note="Castor and Pollux, part of voltage-gated ion
                     channel; pfam06241"
                     /db_xref="CDD:428842"
     CDS             1..892
                     /gene="LOC107903353"
                     /coded_by="XM_016829371.2:96..2774"
                     /db_xref="GeneID:107903353"
ORIGIN      
        1 msqdsaessp sssrdwffps psfihstsns pqspnyprkf stiprhsrss ptdskppkts
       61 tfrsvsssgs aaygdqkygr grrrielirr sektakqeke gpvleqkrvv skavsgvkta
      121 igemgirvfg qrvkirwqma syiailftaf gslvhknfsl hnqvidlqdq istmtirlqa
      181 cntsdtfdti silqesdhls skglkilalt vsiallsmpl fvfkyidyis kfrssyncse
      241 mvslnkqley rvdvllsvhp yakalallva tlmliclggl alfgvtddsl adclwlswty
      301 vadsgnhans egmgprlvsv sisfggmlif ammlglvsea isekldslrk grsevveqnh
      361 tlilgwsdkl gsllnqlaia neslgggivv vmaerdkeem eldiakmefd frgtsvicrs
      421 gspliladlk kvsvskarai vvladdgnad qsdaralrtv lsltgvkegl rghivvelsd
      481 ldnevlvklv ggelvetvva hdvigrlmiq carqpglaqi wedilgfenc efyikrwpql
      541 dgmqfedvli sfpdaipcgv kvasrggkii lnpedsyvlq egdevlviae dddtyapgal
      601 pmvwrgslpg dfivpklmek illcgwrrdm edmimvldaf lapgselwmf nevveserer
      661 klidggldls rlvnitlvhr egnavirrhl eslplesfds ililadesve dsaiqadsrs
      721 latlllirdi qakrlpyrea mvtrgqrgsf srgswigemq qasdrsviis eildprtknl
      781 lsmskisdyv lsnelvsmal amvaedrqin dvleelfaee gnelhirlae lylhegeels
      841 fyeiilrarl kreiiigyrl anaeravinp pnknerrrws vkdvfvvise ke
//
LOCUS       XP_016684868             892 aa            linear   PLN 06-AUG-2024
DEFINITION  ion channel CASTOR isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016684868
VERSION     XP_016684868.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829379.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684868.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..892
                     /product="ion channel CASTOR isoform X2"
                     /calculated_mol_wt=99063
     Region          264..586
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          501..598
                     /region_name="Castor_Poll_mid"
                     /note="Castor and Pollux, part of voltage-gated ion
                     channel; pfam06241"
                     /db_xref="CDD:428842"
     CDS             1..892
                     /gene="LOC107903353"
                     /coded_by="XM_016829379.2:81..2759"
                     /db_xref="GeneID:107903353"
ORIGIN      
        1 msqdsaessp sssrdwffps psfihstsns pqspnyprkf stiprhsrss ptdskppkts
       61 tfrsvsssgs aaygdqkygr grrrielirr sektakqeke gpvleqkrvv skavsgvkta
      121 igemgirvfg qrvkirwqma syiailftaf gslvhknfsl hnqvidlqdq istmtirlqa
      181 cntsdtfdti silqesdhls skglkilalt vsiallsmpl fvfkyidyis kfrssyncse
      241 mvslnkqley rvdvllsvhp yakalallva tlmliclggl alfgvtddsl adclwlswty
      301 vadsgnhans egmgprlvsv sisfggmlif ammlglvsea isekldslrk grsevveqnh
      361 tlilgwsdkl gsllnqlaia neslgggivv vmaerdkeem eldiakmefd frgtsvicrs
      421 gspliladlk kvsvskarai vvladdgnad qsdaralrtv lsltgvkegl rghivvelsd
      481 ldnevlvklv ggelvetvva hdvigrlmiq carqpglaqi wedilgfenc efyikrwpql
      541 dgmqfedvli sfpdaipcgv kvasrggkii lnpedsyvlq egdevlviae dddtyapgal
      601 pmvngasfmh iarparkpqk illcgwrrdv ddmivvldaf lapgselwmf nevveserer
      661 klidggldls rlvnitlvhr egnavirrhl eslplesfds ililadesve dsaiqadsrs
      721 latlllirdi qakrlpyrea mvtrgqrgsf srgswigemq qasdrsviis eildprtknl
      781 lsmskisdyv lsnelvsmal amvaedrqin dvleelfaee gnelhirlae lylhegeels
      841 fyeiilrarl kreiiigyrl anaeravinp pnknerrrws vkdvfvvise ke
//
LOCUS       XP_016684875             861 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ion channel CASTOR isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016684875
VERSION     XP_016684875.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684875.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..861
                     /product="probable ion channel CASTOR isoform X3"
                     /calculated_mol_wt=95841
     Region          264..586
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          501..598
                     /region_name="Castor_Poll_mid"
                     /note="Castor and Pollux, part of voltage-gated ion
                     channel; pfam06241"
                     /db_xref="CDD:428842"
     CDS             1..861
                     /gene="LOC107903353"
                     /coded_by="XM_016829386.2:82..2667"
                     /db_xref="GeneID:107903353"
ORIGIN      
        1 msqdsaessp sssrdwffps psfihstsns pqspnyprkf stiprhsrss ptdskppkts
       61 tfrsvsssgs aaygdqkygr grrrielirr sektakqeke gpvleqkrvv skavsgvkta
      121 igemgirvfg qrvkirwqma syiailftaf gslvhknfsl hnqvidlqdq istmtirlqa
      181 cntsdtfdti silqesdhls skglkilalt vsiallsmpl fvfkyidyis kfrssyncse
      241 mvslnkqley rvdvllsvhp yakalallva tlmliclggl alfgvtddsl adclwlswty
      301 vadsgnhans egmgprlvsv sisfggmlif ammlglvsea isekldslrk grsevveqnh
      361 tlilgwsdkl gsllnqlaia neslgggivv vmaerdkeem eldiakmefd frgtsvicrs
      421 gspliladlk kvsvskarai vvladdgnad qsdaralrtv lsltgvkegl rghivvelsd
      481 ldnevlvklv ggelvetvva hdvigrlmiq carqpglaqi wedilgfenc efyikrwpql
      541 dgmqfedvli sfpdaipcgv kvasrggkii lnpedsyvlq egdevlviae dddtyapgal
      601 pmvwrgslpg dfivpklmek illcgwrrdm edmimvldaf lapgselwmf nevveserer
      661 klidggldls rlvnitlvhr egnavirrhl eslplesfds akrlpyream vtrgqrgsfs
      721 rgswigemqq asdrsviise ildprtknll smskisdyvl snelvsmala mvaedrqind
      781 vleelfaeeg nelhirlael ylhegeelsf yeiilrarlk reiiigyrla naeravinpp
      841 nknerrrwsv kdvfvvisek e
//
LOCUS       XP_040943859            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943859
VERSION     XP_040943859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087925.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_041087925.1:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_016752477            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016752477
VERSION     XP_016752477.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016896988.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016752477.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_016896988.2:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_040943860            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943860
VERSION     XP_040943860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087926.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_041087926.1:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_040943861            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943861
VERSION     XP_040943861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087927.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_041087927.1:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_040943862            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943862
VERSION     XP_040943862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087928.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_041087928.1:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_040943863            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943863
VERSION     XP_040943863.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087929.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_041087929.1:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_040943864            1845 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943864
VERSION     XP_040943864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087930.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1845
                     /product="uncharacterized protein"
                     /calculated_mol_wt=205806
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <710..>984
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          829..854
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <887..1169
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1018..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1029..>1352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1065..1087
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1088..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1200..>1496
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1322..1344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1345..1367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1368..1391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1405..1448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1485..1507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <1519..>1798
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          1578..1601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1624..1649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1650..1670
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1845
                     /gene="LOC107960686"
                     /coded_by="XM_041087930.1:79..5616"
                     /db_xref="GeneID:107960686"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkdemqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlrigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilkl paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlisvkhih fdqqssqpie lrhltslqtl
      661 pmffvrdnel hldaleclne lggqlkicdl qsvrdkeeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkflal rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai vfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivkc gdlfsipnln gfsalrsvyv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklsfipdle efsslrildi sdchkletit irgrcpslek
     1021 lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildi ldcheletvp
     1081 irgrytslkk lhvslcpkls kigdglstst sleelklsgc snlsfipdle gfsslrildi
     1141 ldcheletvp iegrcsslek lhvsscpkls kigdglstst ileelklsgc snlnsipdle
     1201 gfsslqildi sdchelktvp irgrcsslek lhvsscpkls kigdglstst ileelklsgc
     1261 snlssipdle gfsslqildi sdcheleivp irgrcsslek lhvsscpkls kigdglstst
     1321 ileelklsgc anlsfipdle eisslrildi sdchelkivp irgrcsslek lhvsscskls
     1381 kigdglstst sleelklsgc snlssipdlv gfsslqilni sdcheletip vrgicsslek
     1441 lyifscpkls kigdwlstst slekvkligc anlssipdle gfsslrildi snchelktvl
     1501 irgrcpslek lliswcpkls kigdglstat clkklklphc gnlnsipdlv gfsslhilni
     1561 sncnnleivr itgrnstlqv leiiackkls qmgdalltft rlrklrivnc pnlgpiprih
     1621 naylteldft gvgegltrll pdllqpnryl qsltlsdlpd lrsipeslgd tdflrhltik
     1681 rcptlrsipi dllgrldflr rldiggfsee leefpgmdsi qhqlqelrll gweklrslpy
     1741 qllrltalee leiqrfhgie alpdwlgnls ylkclrivsc dklmylpser vmrslskltt
     1801 fiisecprle arcskesgpe wskishicri simckrplqd ldgye
//
LOCUS       XP_040943865             933 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g04780,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040943865
VERSION     XP_040943865.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087931.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..933
                     /product="pentatricopeptide repeat-containing protein
                     At5g04780, mitochondrial"
                     /calculated_mol_wt=104012
     Region          95..931
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          95..119
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          124..151
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          157..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          196..221
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          225..252
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          258..321
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          324..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          359..423
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          425..453
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          497..520
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          529..555
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          561..590
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          596..625
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          629..656
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          662..692
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          698..724
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..933
                     /gene="LOC107903203"
                     /coded_by="XM_041087931.1:2553..5354"
                     /db_xref="GeneID:107903203"
ORIGIN      
        1 mkirtfnslq fqkshlqrsy pssfhrfqts atsshakksn pflslaqdpn ptsfsvpyys
       61 kllskcnask tlypgmqiha halkfgstnd pksrnflisl yakrklfgya rklvdespep
      121 dlvswsalis gyaqnglard aiwafhemhl lglkcneftf psvlkacaft kdlelgrqvh
      181 givvvngfes deyvgnslvv lyskcgkfgd srrlfedipe rsvvswnalf scyvqsdyfg
      241 eavelfremv lsgirpnefs lssminactg ledsgegrki hgfliklgyd sdpfsknalv
      301 dmyakignle davvvfeeir epdivswnal iagcvlhdkh dsaleffgqm rlsgthsnmf
      361 tlssalkaca giglkelgrq lhcnliklnv gsdpfvhvgl idmysksglm ndarmvfnlm
      421 pdkdliawna visahsqnge dmealllfpl mheagvgfnq ttlstvlksv aslqvnyvck
      481 qihalsaksg fesdryvvns lidaygkcal ledatrifre clivdlvgft smitaysqsg
      541 qgeealklyl emldrgiepd pyvcssllna canlsayeqg kqvhvhvlkh gfmydnfagn
      601 slvnmyakcg siddaerafs sipergivsw samigglaqh ghgkealrvf nqmlkygvsp
      661 nqitlvsvlc acnhaglvte aqnyfrsmke lfgfermqeh yacmidllgr agrldeamel
      721 vntmpfqadg svwgallgaa rihknveigq raaemllile peksgthvll aniyasvgmw
      781 nnvakmrrlm kdcnvkkepg vswievkdki ytfiagdrsh vqseeiyakl delserlska
      841 gyipkvefdl hdverdekek llyhhsekla vafgliatpa gapirvkknl rvcmdchtaf
      901 kfiskivsre iilrdinryh hfkdgscscg dyw
//
LOCUS       XP_040943866             933 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g04780,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040943866
VERSION     XP_040943866.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087932.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..933
                     /product="pentatricopeptide repeat-containing protein
                     At5g04780, mitochondrial"
                     /calculated_mol_wt=104012
     Region          95..931
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          95..119
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          124..151
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          157..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          196..221
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          225..252
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          258..321
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          324..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          359..423
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          425..453
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          497..520
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          529..555
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          561..590
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          596..625
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          629..656
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          662..692
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          698..724
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..933
                     /gene="LOC107903203"
                     /coded_by="XM_041087932.1:2306..5107"
                     /db_xref="GeneID:107903203"
ORIGIN      
        1 mkirtfnslq fqkshlqrsy pssfhrfqts atsshakksn pflslaqdpn ptsfsvpyys
       61 kllskcnask tlypgmqiha halkfgstnd pksrnflisl yakrklfgya rklvdespep
      121 dlvswsalis gyaqnglard aiwafhemhl lglkcneftf psvlkacaft kdlelgrqvh
      181 givvvngfes deyvgnslvv lyskcgkfgd srrlfedipe rsvvswnalf scyvqsdyfg
      241 eavelfremv lsgirpnefs lssminactg ledsgegrki hgfliklgyd sdpfsknalv
      301 dmyakignle davvvfeeir epdivswnal iagcvlhdkh dsaleffgqm rlsgthsnmf
      361 tlssalkaca giglkelgrq lhcnliklnv gsdpfvhvgl idmysksglm ndarmvfnlm
      421 pdkdliawna visahsqnge dmealllfpl mheagvgfnq ttlstvlksv aslqvnyvck
      481 qihalsaksg fesdryvvns lidaygkcal ledatrifre clivdlvgft smitaysqsg
      541 qgeealklyl emldrgiepd pyvcssllna canlsayeqg kqvhvhvlkh gfmydnfagn
      601 slvnmyakcg siddaerafs sipergivsw samigglaqh ghgkealrvf nqmlkygvsp
      661 nqitlvsvlc acnhaglvte aqnyfrsmke lfgfermqeh yacmidllgr agrldeamel
      721 vntmpfqadg svwgallgaa rihknveigq raaemllile peksgthvll aniyasvgmw
      781 nnvakmrrlm kdcnvkkepg vswievkdki ytfiagdrsh vqseeiyakl delserlska
      841 gyipkvefdl hdverdekek llyhhsekla vafgliatpa gapirvkknl rvcmdchtaf
      901 kfiskivsre iilrdinryh hfkdgscscg dyw
//
LOCUS       XP_016684803             704 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock 70 kDa protein 6, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016684803
VERSION     XP_016684803.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..704
                     /product="heat shock 70 kDa protein 6, chloroplastic"
                     /calculated_mol_wt=75310
     Region          32..702
                     /region_name="PLN03184"
                     /note="chloroplast Hsp70; Provisional"
                     /db_xref="CDD:215618"
     CDS             1..704
                     /gene="LOC107903288"
                     /coded_by="XM_016829314.2:209..2323"
                     /db_xref="GeneID:107903288"
ORIGIN      
        1 masstaqinv lggigfassr kpnyhsprtv flgqrlgkps plnaaflrla ktngkrynvg
       61 pvrvvnekvv gidlgttnsa vaameggkpt ivtnaegqrt tpsvvaytkt gdrlvgqiak
      121 rqavvnpent ffsvkrfigr kmsevdeesk qvsykvvrdd ngnvklecpa igkqfaaeei
      181 saqvlrklvd daskflndkv tkavvtvpay fndsqrtatk dagriaglev lriineptaa
      241 slaygfekkn netilvfdlg ggtfdvsvle vgdgvfevls tsgdthlggd dfdkrivdwl
      301 adsfkrdegi dllkdkqalq rltetaekak melssltqan islpfitata dgpkhietti
      361 trvkfeelcs dlldrlktpv enslrdakls fkdidevilv ggstripavq elvrkmtgke
      421 pnvtvnpdev valgaavqag vlsgdvsdiv lldvsplslg letlggvmtk iiprnttlpt
      481 sksevfstaa dgqtsveinv lqgerefvrd nkslgsfrld gippaprgvp qievkfdida
      541 ngilsvtavd kgtgkkqdit itgastlpnd evdrmvkeae kfskedkerr daidtknqad
      601 svvyqtekql kelgdkvpgp vkekveaklq elkdaiagds tqgmkdamaa lnqevmqlgq
      661 slynqpgagg ssagpapgge tgpsdssnkg pegdvidadf tdsk
//
LOCUS       XP_040943867             284 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA1 [Gossypium hirsutum].
ACCESSION   XP_040943867
VERSION     XP_040943867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087933.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..284
                     /product="putative disease resistance protein RGA1"
                     /calculated_mol_wt=32008
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..>284
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     CDS             1..284
                     /gene="LOC107960704"
                     /coded_by="XM_041087933.1:121..975"
                     /db_xref="GeneID:107960704"
ORIGIN      
        1 maeafvsavm gevaskaasv avemislgwg fkdemqrlgn sleligaflr daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrk kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 diltslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvadmlvs
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddv
//
LOCUS       XP_040943868            1324 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA3 [Gossypium hirsutum].
ACCESSION   XP_040943868
VERSION     XP_040943868.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087934.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1324
                     /product="putative disease resistance protein RGA3"
                     /calculated_mol_wt=147857
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          811..>1097
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          829..842
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1017..>1307
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1018..1061
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1065..1086
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1087..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1275..1297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1324
                     /gene="LOC107960665"
                     /coded_by="XM_041087934.1:386..4360"
                     /db_xref="GeneID:107960665"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkddmqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrr kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlsigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilel paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlislkhih fdqqssqpie lrhlislqtl
      661 pmffvrdnel hldaleclne lgrqlkicdl qsvrdtdeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkfial rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai mfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivtc gdlfsipnln gfsalrsvhv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklssipdle efsslrildi sncrelkivp irgrcpslkk
     1021 ilisscpkls kigdglstst sledlklndc anlssipdle elsslrifdi sdcheletis
     1081 irgrcpslkk lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildv
     1141 sdcheletfl irgrcsslek lhisscpkls kigdwlstst sleelklggc vnlssipdlv
     1201 gfsslrifhi sdchelkiip vrgrcsslek lhisscpkls rigdwlstst sleelklggc
     1261 anlssipdlv gfsslrildi sechkletip ikgrcsslrk lhisscpkls eigdwlstst
     1321 slkn
//
LOCUS       XP_040943869            1324 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA3 [Gossypium hirsutum].
ACCESSION   XP_040943869
VERSION     XP_040943869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087935.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1324
                     /product="putative disease resistance protein RGA3"
                     /calculated_mol_wt=147857
     Region          9..93
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Site            order(72,76,79,103,106,109..111,113..115,117..118)
                     /site_type="other"
                     /note="RanGAP2 interaction site [polypeptide binding]"
                     /db_xref="CDD:271353"
     Region          167..413
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <563..>692
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          811..>1097
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          829..842
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          855..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          878..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          925..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          948..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1017..>1307
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1018..1061
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1065..1086
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1087..1111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1135..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1205..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1252..1274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1275..1297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1298..1317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1324
                     /gene="LOC107960665"
                     /coded_by="XM_041087935.1:386..4360"
                     /db_xref="GeneID:107960665"
ORIGIN      
        1 maeafvsavv gevaskaasv avemislgwg fkddmqrlgn slemigaflq daegnqkqmn
       61 svklwlkrlr dvayeadevl deiayeflrr kvetgdqmlr kvrdlpstvt fqhnmankvk
      121 dilnslddln kiakdyglqq lavdqrifip snvetvsfld dsnivgrknd vskvvdmlls
      181 pqddrtvsvv pivgmagigk ttlarlvyhd vdverrfdvr fwvcvsddfn vkrilremle
      241 hdmnykhtsi pqnlnaltak lkgkieqakr gneqikyllv lddvwdveqw delmrclegv
      301 nknrgnkviv ttriedvalk vetlpnqrhq pgklkyeecw siikekacgd spispslvli
      361 geeiakqchg vplaakvigg tmrkiersra awlkiqksdv wdsvysvlrl sfdhlsspcl
      421 kkcfaycamf pkdfcfrkeq liqlwmaegf lgaskemmdt gnryfhells nslfqdvgkd
      481 rcgniltckm hdlvhdlals vskfetlifq ensisitdev shirhlsigy dgeslpiilt
      541 avapklhslf seidvfkkls rtftslrvlk fsgadyilel paslgelkhl rymdisktsi
      601 kvlpqsitkl ymlqtlrfmg creiafpdgl rnlislkhih fdqqssqpie lrhlislqtl
      661 pmffvrdnel hldaleclne lgrqlkicdl qsvrdtdeag kanlrlktkl ckvifewskf
      721 sndtceevle glqppsglqs livwnyggen lpswmsrpvh gsnigsllld nlmelelnnc
      781 inckslpplg qlqslkfial rnmeqlkrig nefycdgssq ceievfpalk tfilrqmrnl
      841 eewtattaai mfpcleellv sncpllesvp ltgqclslkk lciedcsrls sigdglatst
      901 vleeltivtc gdlfsipnln gfsalrsvhv sdcgrlaivp iagicsslke fciskcngls
      961 kigeglstsi cleelklsdc aklssipdle efsslrildi sncrelkivp irgrcpslkk
     1021 ilisscpkls kigdglstst sledlklndc anlssipdle elsslrifdi sdcheletis
     1081 irgrcpslkk lhisscpkls kigdwlstst sleelklggc anlssipdlv gffslrildv
     1141 sdcheletfl irgrcsslek lhisscpkls kigdwlstst sleelklggc vnlssipdlv
     1201 gfsslrifhi sdchelkiip vrgrcsslek lhisscpkls rigdwlstst sleelklggc
     1261 anlssipdlv gfsslrildi sechkletip ikgrcsslrk lhisscpkls eigdwlstst
     1321 slkn
//
LOCUS       XP_016684832             320 aa            linear   PLN 06-AUG-2024
DEFINITION  splicing factor YJU2 [Gossypium hirsutum].
ACCESSION   XP_016684832
VERSION     XP_016684832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..320
                     /product="splicing factor YJU2"
                     /calculated_mol_wt=36212
     Region          9..>179
                     /region_name="Saf4_Yju2"
                     /note="Saf4/Yju2 protein; pfam04502"
                     /db_xref="CDD:461333"
     CDS             1..320
                     /gene="LOC107903323"
                     /coded_by="XM_016829343.2:249..1211"
                     /db_xref="GeneID:107903323"
ORIGIN      
        1 mgerkvlnky yppdfdpskl prarrpknqq mkvrmmlpms ircntcgnyi ykgtkfnsrk
       61 edvigetylg iqifrfyfkc tkcsaemtik tdpqnsdyvv esgatrnfep wraedeeaek
      121 ekqkreseem gdamkslenr tldskremdi laaldemksm ksrhatvsvd smlealqrta
      181 aekekkieee dealiksifq kpkefvrris ddvfdddedl trllsgnset sndglkrrkv
      241 seesssnptd altkaslpdd ssskegssgs gsrqvkapfm ssvkisvvkk kpekkeekvg
      301 ndtstgllsl cesygesddd
//
LOCUS       XP_016684843             289 aa            linear   PLN 06-AUG-2024
DEFINITION  splicing factor YJU2 [Gossypium hirsutum].
ACCESSION   XP_016684843
VERSION     XP_016684843.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684843.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="splicing factor YJU2"
                     /calculated_mol_wt=33402
     Region          9..>179
                     /region_name="Saf4_Yju2"
                     /note="Saf4/Yju2 protein; pfam04502"
                     /db_xref="CDD:461333"
     CDS             1..289
                     /gene="LOC107903333"
                     /coded_by="XM_016829354.2:274..1143"
                     /db_xref="GeneID:107903333"
ORIGIN      
        1 mgerkvlnky yppnfdpskl lrvrrpknkq lkvrmmlpms ircntcgnyi ykgtklnsrk
       61 envigetylg iqifrfyfkc tkcstemaik tdpqnsdyav esgatrnfep wraedeevek
      121 erwkreseem gdamkslenr tldskremdi laaldemksm ksrhatvsvd smlealqrta
      181 aekekkieee dealiksifq kpkefvrris ddvfnddedl trllsgnget sndglkrrkv
      241 sedaltkarv mahfcprprn qktkqkethn ttkaqftngp slaqinpkp
//
LOCUS       XP_040943870            1617 aa            linear   PLN 06-AUG-2024
DEFINITION  probable phosphoinositide phosphatase SAC9 [Gossypium hirsutum].
ACCESSION   XP_040943870
VERSION     XP_040943870.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087936.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1617
                     /product="probable phosphoinositide phosphatase SAC9"
                     /calculated_mol_wt=179865
     Region          84..387
                     /region_name="Syja_N"
                     /note="SacI homology domain; pfam02383"
                     /db_xref="CDD:460545"
     Region          508..538
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     CDS             1..1617
                     /gene="LOC107903192"
                     /coded_by="XM_041087936.1:284..5137"
                     /db_xref="GeneID:107903192"
ORIGIN      
        1 mespvggsrn tsivvvgvdp gevyivvsls tridtqviyv dpttgvlryh gkfgldvfks
       61 ekkaldyltn gspwlckski hakailgyaa lgsyglllva trladtipsl pgggcastvi
      121 esqwikiplh npqpqgrgev kniqelteld idgkhyfset rdltrpfpsr mpvlspdnef
      181 vwngwlsmpf kntglkqhcv illqgfaesr sfvssgqagv valiarrsrl hpgtrylarg
      241 inscfstgne veceqlvwvp krtdqsvpfn tftwrrgtip iwwgaelkit aaeaeiyvsd
      301 rhpykgslqy yqrlskrydt rtldgdtgen qsknafvpia cinllrngeg kserilvqhf
      361 eeslnhikst gklpctrihl mnydwharik lqgeqqtiee lwkllkaptl aigisegdyl
      421 psrqhlkdcr geiiynddfe gafclryhqn gvfrfncads ldrtnaasyf gslqvfveqc
      481 qrlqlsldnd langyqsvkn ydgytaplpr gwekrsdatt gktyyidhnt rattwnhpcp
      541 dkpwkrfemt fdkfkrstil spvsqladlf llagdihail ytgskamhsh ilnifneeag
      601 kfkqfsaaqn mkitlqrryk navvdssrqk qlemflgirl fkhlpsvpiq plqvlsrpsg
      661 fflkpirgmf etsnggdsll sfkkkdliwv cpegvdvvev fiylcepchv cqllltvshg
      721 addstypstv dvrtgrsldg lklvvegafi pqcgngtnll ipltgpisad dmtvtgagay
      781 lpnedtslsl lydfeelegd ldfltrival tfypaasgsp itlgeveilg vslpwnevfa
      841 negrgaklte latkyqketn pslsgsdtnp fsstsisnea vpasakqgaa ykgfdlltpa
      901 dlssepvsyp vtdldqafvg gchvpetdck sstsqdskpq engsekylnc lkslagpnme
      961 rnlhfleamk leierlqlnl saaerdrall sigtdqasvn pnilldesym grlyrvanil
     1021 allgqnaled ktigsiglgk ikynvidfwn isrigescsr rmcevrvktk atissslmvs
     1081 ykegsesvfm csqckrkacr vccagggall lqnyireetn cngllshssq vdrtanhsvi
     1141 ldtaickkcc hkiildalal dyvrvlissr rraraysaan maldevmgss fldglpdrsh
     1201 pyrnqqgvkv leqllsgeks laefpfasfl hpvetakdsa pflslltpld sgswhsywka
     1261 plnttsvdfv ivldtlsdvk gvilivspcg yseadapmvq irvskklere ersfigkwdv
     1321 qslissspef ygpeksgrdn klprhikfpf tnpvrcrivq itlslplqrp gsssvnfdkd
     1381 inllslddtp fpqetrsfea amprdpclha kriviagspa neeiglrssq stdqinyinr
     1441 lnqtpqlrfk vpieaerlmy hdlvleqylp pslpllagfq ldafnaikpr ithlpssdad
     1501 ildisitsle drhispavlc iqvsaiqegk gskmvpiaey rlpetkpgtp mffdfpkqiq
     1561 trricfklvg dvsafaddtt eqdgsgirap paslslsnki klyhysynhy dtgmyry
//
LOCUS       XP_040943871            1617 aa            linear   PLN 06-AUG-2024
DEFINITION  probable phosphoinositide phosphatase SAC9 [Gossypium hirsutum].
ACCESSION   XP_040943871
VERSION     XP_040943871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087937.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1617
                     /product="probable phosphoinositide phosphatase SAC9"
                     /calculated_mol_wt=179865
     Region          84..387
                     /region_name="Syja_N"
                     /note="SacI homology domain; pfam02383"
                     /db_xref="CDD:460545"
     Region          508..538
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     CDS             1..1617
                     /gene="LOC107903192"
                     /coded_by="XM_041087937.1:430..5283"
                     /db_xref="GeneID:107903192"
ORIGIN      
        1 mespvggsrn tsivvvgvdp gevyivvsls tridtqviyv dpttgvlryh gkfgldvfks
       61 ekkaldyltn gspwlckski hakailgyaa lgsyglllva trladtipsl pgggcastvi
      121 esqwikiplh npqpqgrgev kniqelteld idgkhyfset rdltrpfpsr mpvlspdnef
      181 vwngwlsmpf kntglkqhcv illqgfaesr sfvssgqagv valiarrsrl hpgtrylarg
      241 inscfstgne veceqlvwvp krtdqsvpfn tftwrrgtip iwwgaelkit aaeaeiyvsd
      301 rhpykgslqy yqrlskrydt rtldgdtgen qsknafvpia cinllrngeg kserilvqhf
      361 eeslnhikst gklpctrihl mnydwharik lqgeqqtiee lwkllkaptl aigisegdyl
      421 psrqhlkdcr geiiynddfe gafclryhqn gvfrfncads ldrtnaasyf gslqvfveqc
      481 qrlqlsldnd langyqsvkn ydgytaplpr gwekrsdatt gktyyidhnt rattwnhpcp
      541 dkpwkrfemt fdkfkrstil spvsqladlf llagdihail ytgskamhsh ilnifneeag
      601 kfkqfsaaqn mkitlqrryk navvdssrqk qlemflgirl fkhlpsvpiq plqvlsrpsg
      661 fflkpirgmf etsnggdsll sfkkkdliwv cpegvdvvev fiylcepchv cqllltvshg
      721 addstypstv dvrtgrsldg lklvvegafi pqcgngtnll ipltgpisad dmtvtgagay
      781 lpnedtslsl lydfeelegd ldfltrival tfypaasgsp itlgeveilg vslpwnevfa
      841 negrgaklte latkyqketn pslsgsdtnp fsstsisnea vpasakqgaa ykgfdlltpa
      901 dlssepvsyp vtdldqafvg gchvpetdck sstsqdskpq engsekylnc lkslagpnme
      961 rnlhfleamk leierlqlnl saaerdrall sigtdqasvn pnilldesym grlyrvanil
     1021 allgqnaled ktigsiglgk ikynvidfwn isrigescsr rmcevrvktk atissslmvs
     1081 ykegsesvfm csqckrkacr vccagggall lqnyireetn cngllshssq vdrtanhsvi
     1141 ldtaickkcc hkiildalal dyvrvlissr rraraysaan maldevmgss fldglpdrsh
     1201 pyrnqqgvkv leqllsgeks laefpfasfl hpvetakdsa pflslltpld sgswhsywka
     1261 plnttsvdfv ivldtlsdvk gvilivspcg yseadapmvq irvskklere ersfigkwdv
     1321 qslissspef ygpeksgrdn klprhikfpf tnpvrcrivq itlslplqrp gsssvnfdkd
     1381 inllslddtp fpqetrsfea amprdpclha kriviagspa neeiglrssq stdqinyinr
     1441 lnqtpqlrfk vpieaerlmy hdlvleqylp pslpllagfq ldafnaikpr ithlpssdad
     1501 ildisitsle drhispavlc iqvsaiqegk gskmvpiaey rlpetkpgtp mffdfpkqiq
     1561 trricfklvg dvsafaddtt eqdgsgirap paslslsnki klyhysynhy dtgmyry
//
LOCUS       XP_016684710             299 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016684710
VERSION     XP_016684710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829221.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..299
                     /product="60S ribosomal protein L5 isoform X1"
                     /calculated_mol_wt=33966
     Region          1..278
                     /region_name="PTZ00069"
                     /note="60S ribosomal protein L5; Provisional"
                     /db_xref="CDD:240254"
     CDS             1..299
                     /gene="LOC107903176"
                     /coded_by="XM_016829221.2:175..1074"
                     /db_xref="GeneID:107903176"
ORIGIN      
        1 mafvkaqktk ayfkrfqvpf krrregktdy rarirltnqd knkyntpkyr fvvrfsnkdi
       61 taqiisanit gdmilasays helpryglev gltnyaaayc tglllgrrvl kllemddeyq
      121 gnveatgedf sveptdtrrp fralldvgli rtttgnnvfg alkgaldagl diphsdkrfa
      181 gfskdskqld aevhrnyiyg ghvaaymril medepekyqs hfseyikrgi eadnieslyk
      241 kvhaairadp sakksekapp kqhkrfnlkk ltyeerkakl idrlhtlnaa agadseded
//
LOCUS       XP_016684717             227 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016684717
VERSION     XP_016684717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="60S ribosomal protein L5 isoform X2"
                     /calculated_mol_wt=25348
     Region          <2..206
                     /region_name="PTZ00069"
                     /note="60S ribosomal protein L5; Provisional"
                     /db_xref="CDD:240254"
     CDS             1..227
                     /gene="LOC107903176"
                     /coded_by="XM_016829228.2:71..754"
                     /db_xref="GeneID:107903176"
ORIGIN      
        1 milasayshe lpryglevgl tnyaaayctg lllgrrvlkl lemddeyqgn veatgedfsv
       61 eptdtrrpfr alldvglirt ttgnnvfgal kgaldagldi phsdkrfagf skdskqldae
      121 vhrnyiyggh vaaymrilme depekyqshf seyikrgiea dnieslykkv haairadpsa
      181 kksekappkq hkrfnlkklt yeerkaklid rlhtlnaaag adseded
//
LOCUS       XP_016684701             434 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box/LRR-repeat protein At3g49150 [Gossypium hirsutum].
ACCESSION   XP_016684701
VERSION     XP_016684701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..434
                     /product="putative F-box/LRR-repeat protein At3g49150"
                     /calculated_mol_wt=49251
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          139..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          162..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          187..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          210..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          259..296
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          297..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          366..434
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..434
                     /gene="LOC107903166"
                     /coded_by="XM_016829212.2:265..1569"
                     /db_xref="GeneID:107903166"
ORIGIN      
        1 mamcvedris sfpdyilchi lsflpikeav rtsiistkwr clfssistie fdhcllsglt
       61 drnvdsfknf vdrllkfsdq vsldcfrlsd gisswndedh dfdvsgwica alcrgvkeid
      121 lqldnlgdap pvlftchslv kltlegkgsk levppdaclg nlktlwlenw vlfgdsinrl
      181 isnchvlqdl aftdcciant seltiqspsl kelvldffse gvgdfnyvlv inapnlvyfr
      241 yyskivdgyt lsnmnslena dihidafdfe ddettatrlf sddeinatrl iqgicnvrsl
      301 tlvidgvipp avpfpifhnl iefnfygrgi wlveflycap nlktlkfsfs dvpgtrwktl
      361 ltevpscllf hlkeiemlis csdkhmiryf ldnamvlekl iirvrdltat qrekarnkll
      421 qllknskkcq ivil
//
LOCUS       XP_016752455             423 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14096 [Gossypium hirsutum].
ACCESSION   XP_016752455
VERSION     XP_016752455.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016896966.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016752455.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="F-box/LRR-repeat protein At4g14096"
                     /calculated_mol_wt=48172
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          142..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          166..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          191..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          214..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          262..287
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          288..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          354..423
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..423
                     /gene="LOC107960656"
                     /coded_by="XM_016896966.2:83..1354"
                     /db_xref="GeneID:107960656"
ORIGIN      
        1 mamyvedris nfpdhirchi lsflpihesv rtsilstkwr nlfasistvd fdtyllrglt
       61 erniidsfkn fvdrllkfpd qlsldcfrlr adgiaswndg yhdfdvsgwi cgavcrgvke
      121 idlyldnfch tlpallftch slrtltlvak dskifkvpse vclrnlktlc itnsvlvgds
      181 lnrlisnchv ledltfdecs vvnardiniq ipslkslfld fffsigdsny vvvinapnlv
      241 yfrydsvivk gynlsnmksl ekaeiciwfg ssnyetsaih lfqgicnvrs lrltihevip
      301 ltsrfpilhn liefeflgke iwlveflhca pnlktltvll qdvagtrwni dapsclsfhl
      361 kkieiseyat nmieivryll dnsmvlekli ikvnamnatr askarnqllp llksskkgli
      421 vil
//
LOCUS       XP_040943873             345 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box/LRR-repeat protein At3g49150 [Gossypium hirsutum].
ACCESSION   XP_040943873
VERSION     XP_040943873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087939.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..345
                     /product="putative F-box/LRR-repeat protein At3g49150"
                     /calculated_mol_wt=39184
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          <118..>219
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          165..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          190..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          213..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          261..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          287..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..345
                     /gene="LOC121214401"
                     /coded_by="XM_041087939.1:102..1139"
                     /db_xref="GeneID:121214401"
ORIGIN      
        1 mamyvedris nfpdhirchi lsflpiqeav rasiistkwr nlfasistvd fdtyllcglt
       61 drnvdsfknf vdrllkfpdq lsldcfrirg deiaswndgd hdfdvsgwic gavcrgvkei
      121 dlyldnfcht lpallftchs lrtltlvakd skifevpsev clrnlktlci tnsvligdsl
      181 nrlisnchvl edltfdecsv ayareiiiqi pslkslyldf ffpigalnyv vvinapnlvy
      241 frydsvvvkg yslsnmksle kaeiciwfgs snyetsaihl fqgicnvrsl rltihevipl
      301 tsrfpilhnl iefeflgkei wlveflhcap nlktltvllq dvagt
//
LOCUS       XP_016684649             486 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At4g22280 [Gossypium hirsutum].
ACCESSION   XP_016684649
VERSION     XP_016684649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..486
                     /product="F-box protein At4g22280"
                     /calculated_mol_wt=55756
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          139..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          162..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          211..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          287..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          310..336
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          356..398
                     /region_name="FBD"
                     /note="pfam08387"
                     /db_xref="CDD:462458"
     CDS             1..486
                     /gene="LOC107903108"
                     /coded_by="XM_016829160.2:265..1725"
                     /db_xref="GeneID:107903108"
ORIGIN      
        1 mamcvedris sfpdhilchi lsflpieeav rtsiistkwr ylfasistik fdgylisglt
       61 ernldsfknf vdrllkfpdq vsldcfrlnd iiswndedhn fdvsdwicaa lcrgvkeidl
      121 dlenlgdilp allftchslv tlklvavgse ikvpsdvclg nlktlqlins efvgdsihrl
      181 isnchvledl afincdfeyl reevniqsps lkrlvlvfdl vefenidyvv vinapnlvyf
      241 qytdtvvkgy tltnmkclek ahiniwesds idcetsathl iqglrnvrsl slttdeaifl
      301 tnrlpifhnl iefeydshgf dgietwlvef lhcapnletl tlnfpdvagt rrkalpievp
      361 sclsfhlkei eiscfethii emvsyfldna mvlenliikm kgmtvtenes hqpiiavtke
      421 fkemsncdfv vlfyimvrty qclawfcidv lfviyislli sdtftnrnrl ylmvglyvcv
      481 yvylci
//
LOCUS       XP_016684658             433 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box protein At1g58310 [Gossypium hirsutum].
ACCESSION   XP_016684658
VERSION     XP_016684658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829169.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..433
                     /product="putative F-box protein At1g58310"
                     /calculated_mol_wt=49224
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          141..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          164..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          189..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          212..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          288..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          362..432
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..433
                     /gene="LOC107903118"
                     /coded_by="XM_016829169.2:217..1518"
                     /db_xref="GeneID:107903118"
ORIGIN      
        1 mamcsedris sfpdyilchi lsflpikeav rtsiistkwr ylfasistie fdrcllsglt
       61 drnvdsfknf vdrllkfpdq vsldcfrlsd giswndedhd fdvsgwicaa lcrgvkeidf
      121 hldylgdvlt lpavlftyhs lvtlklnaeg skikvpsdvc lgnlktlqlr nsvvdgdsih
      181 rlisnchvle dlafiecfla yagalniqtp slkrlvldfd vveyrdfnyv vvinapnlvy
      241 fqytdavaeg yalsnmksle kadisiyrfd ssdcetsath liqgictvrs lsltidevif
      301 rtcrlpifhn liefeyrglg fngretwlve flhcasnlkt ltlnflvvae tqwkvllmev
      361 psclslhlke ikilnfkgda rmfemisyfl dnamvleklm igmeslsetq qsivfnqllq
      421 lpksskkcqv vif
//
LOCUS       XP_016684667             428 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59190 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016684667
VERSION     XP_016684667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829178.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..428
                     /product="F-box/LRR-repeat protein At3g59190 isoform X1"
                     /calculated_mol_wt=48379
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          139..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          162..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          187..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          209..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          258..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          285..307
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          308..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          359..428
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..428
                     /gene="LOC107903129"
                     /coded_by="XM_016829178.2:300..1586"
                     /db_xref="GeneID:107903129"
ORIGIN      
        1 mamcvedris sfpdhilfhi lsflpikdav rtsiistkwr ylfasistik fdgslmsglt
       61 drnvdsfknf vdrllkfpdq vsldcfrlnd nvswndkehd fdvsgwicaa lcrgvkeidl
      121 dlknlgdtlp allftchslv tlkldavdse ikvpsdvclg nlktlqlrns vlfgdsihrl
      181 isnchvledl afiecgfdis evniqspslk rlvlefdvte gryfnyvvvi napilvyfqy
      241 haavaasytl stmkslekad isiyqfdsin setsathliq gicnvrslsl ttdaaiflts
      301 glpifhnlie fkylgvgfng retwlveflh cvpnlktltl nfpddagtrw kalrmkvpsc
      361 lsfhlkeiei syfdprmiem vsyfldnamv leklkistaa ltwsqkwgaq ikllqllkrs
      421 kkslivil
//
LOCUS       XP_016684674             423 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59190 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016684674
VERSION     XP_016684674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="F-box/LRR-repeat protein At3g59190 isoform X2"
                     /calculated_mol_wt=47657
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          139..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          162..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          187..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          209..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          258..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          285..307
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          308..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..423
                     /gene="LOC107903129"
                     /coded_by="XM_016829185.2:300..1571"
                     /db_xref="GeneID:107903129"
ORIGIN      
        1 mamcvedris sfpdhilfhi lsflpikdav rtsiistkwr ylfasistik fdgslmsglt
       61 drnvdsfknf vdrllkfpdq vsldcfrlnd nvswndkehd fdvsgwicaa lcrgvkeidl
      121 dlknlgdtlp allftchslv tlkldavdse ikvpsdvclg nlktlqlrns vlfgdsihrl
      181 isnchvledl afiecgfdis evniqspslk rlvlefdvte gryfnyvvvi napilvyfqy
      241 haavaasytl stmkslekad isiyqfdsin setsathliq gicnvrslsl ttdaaiflts
      301 glpifhnlie fkylgvgfng retwlveflh cvpnlktltl nfpddagtrw kalrmkvpsc
      361 lsfhlkeiei syfdprmiem gadwrgtwlv eflhcdlavt ktrllasacq vlwssgvihv
      421 vin
//
LOCUS       XP_016684681             392 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59250 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016684681
VERSION     XP_016684681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="F-box/LRR-repeat protein At3g59250 isoform X3"
                     /calculated_mol_wt=44284
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          103..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          126..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          151..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          173..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          222..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          249..271
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          272..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          323..392
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..392
                     /gene="LOC107903129"
                     /coded_by="XM_016829192.2:300..1478"
                     /db_xref="GeneID:107903129"
ORIGIN      
        1 mamcvedris sfpdhilfhi lsflpikdav rtsiistkwr ylfasistik fdgslmsglt
       61 drnvdsfknf vdrllkfpdq eidldlknlg dtlpallftc hslvtlklda vdseikvpsd
      121 vclgnlktlq lrnsvlfgds ihrlisnchv ledlafiecg fdisevniqs pslkrlvlef
      181 dvtegryfny vvvinapilv yfqyhaavaa sytlstmksl ekadisiyqf dsinsetsat
      241 hliqgicnvr slslttdaai fltsglpifh nliefkylgv gfngretwlv eflhcvpnlk
      301 tltlnfpdda gtrwkalrmk vpsclsfhlk eieisyfdpr miemvsyfld namvleklki
      361 staaltwsqk wgaqikllql lkrskksliv il
//
LOCUS       XP_016684690             416 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box/FBD/LRR-repeat protein At5g22670 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016684690
VERSION     XP_016684690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..416
                     /product="putative F-box/FBD/LRR-repeat protein At5g22670
                     isoform X1"
                     /calculated_mol_wt=47038
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          141..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          164..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          189..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          212..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          240..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          271..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          294..320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          345..415
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..416
                     /gene="LOC107903155"
                     /coded_by="XM_016829201.2:206..1456"
                     /db_xref="GeneID:107903155"
ORIGIN      
        1 mamcsedris slpdhilchi lsflplkeav rtsiistkwr ylfasistie fddsllsglt
       61 drnvdsfknf vdrllkfpdq vsldcfrlrd giswndedhd fdvsgwicaa lcrgvkeidl
      121 fldyfgcvlt vpavlftchs lvtlklnaec rkidvpsdvc lgnlktlqlr ntvvdgdsih
      181 rlisnchvle dlafiechla yasalniktp slkrlvldld vveygdfnnv vvinapnlek
      241 adisiylfgf sdretsathl iqgiiqgict vrslnltind vifrtcrlpi fhnlikfeyg
      301 vlgsngretw lveflhcapn lntltlnflv vvetqwkvlh mevpsclslh lkeikilnfk
      361 gdaqmfemis yfldnamvle klmigmksls etqqsivfnq llqlpksskk cqvvif
//
LOCUS       XP_040943875             346 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14103 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943875
VERSION     XP_040943875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087941.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="F-box/LRR-repeat protein At4g14103 isoform X2"
                     /calculated_mol_wt=39204
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          275..345
                     /region_name="FBD"
                     /note="domain in FBox and BRCT domain containing plant
                     proteins; smart00579"
                     /db_xref="CDD:214730"
     CDS             1..346
                     /gene="LOC107903155"
                     /coded_by="XM_041087941.1:202..1242"
                     /db_xref="GeneID:107903155"
ORIGIN      
        1 mamcsedris slpdhilchi lsflplkeav rtsiistkwr ylfasistie fddsllsglt
       61 drnvdsfknf vdrllkfpdq vsldcfrlrd giswndedhd fdvsgwicaa lcrgvkeidl
      121 fldyfgcvlt vpavlftchs lvtlklnaec rkidvpsdvc lgnlktlqlr ntvvdgdsih
      181 sdretsathl iqgiiqgict vrslnltind vifrtcrlpi fhnlikfeyg vlgsngretw
      241 lveflhcapn lntltlnflv vvetqwkvlh mevpsclslh lkeikilnfk gdaqmfemis
      301 yfldnamvle klmigmksls etqqsivfnq llqlpksskk cqvvif
//
LOCUS       XP_016684632             336 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            [Gossypium hirsutum].
ACCESSION   XP_016684632
VERSION     XP_016684632.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684632.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..336
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like"
                     /calculated_mol_wt=39284
     Region          59..162
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          211..293
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..336
                     /gene="LOC107903077"
                     /coded_by="XM_016829143.2:1249..2259"
                     /db_xref="GeneID:107903077"
ORIGIN      
        1 mldtaqnfer aferfeeqdt nfraelerge gwpsvddwnn vrnlrdfleh fyeftlrisg
       61 tsyvtsnnfl delseidill rdaqlnsnva fnvmaikmke kydkywggid kinllmfvac
      121 vldprqklky lefvlsemss sekacemmqk lkeslyelfd eykpplhstc sqssvpthvs
      181 lgesqqkmkr riqalykkre leicgedkts eldkylaean egfvedfdil lwwkvnsprf
      241 ptlskmardl laipvftvas efafstggrv ldqyrssltp kivqalvctq dwirqsssqe
      301 dikkieeriq eldkienglm qleifwreem dtngey
//
LOCUS       XP_040943876             336 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            [Gossypium hirsutum].
ACCESSION   XP_040943876
VERSION     XP_040943876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087942.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..336
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like"
                     /calculated_mol_wt=39284
     Region          59..162
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          211..293
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..336
                     /gene="LOC107903077"
                     /coded_by="XM_041087942.1:1227..2237"
                     /db_xref="GeneID:107903077"
ORIGIN      
        1 mldtaqnfer aferfeeqdt nfraelerge gwpsvddwnn vrnlrdfleh fyeftlrisg
       61 tsyvtsnnfl delseidill rdaqlnsnva fnvmaikmke kydkywggid kinllmfvac
      121 vldprqklky lefvlsemss sekacemmqk lkeslyelfd eykpplhstc sqssvpthvs
      181 lgesqqkmkr riqalykkre leicgedkts eldkylaean egfvedfdil lwwkvnsprf
      241 ptlskmardl laipvftvas efafstggrv ldqyrssltp kivqalvctq dwirqsssqe
      301 dikkieeriq eldkienglm qleifwreem dtngey
//
LOCUS       XP_040943878              96 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAM133 [Gossypium hirsutum].
ACCESSION   XP_040943878
VERSION     XP_040943878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087944.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..96
                     /product="protein FAM133"
                     /calculated_mol_wt=10458
     CDS             1..96
                     /gene="LOC107906125"
                     /coded_by="XM_041087944.1:118..408"
                     /db_xref="GeneID:107906125"
ORIGIN      
        1 meknqaykam qrpkhgssag sedmedampq vtqrskvksw dcssssssss sdsdssssse
       61 ssnsddeerr srilksksrr nkkkkskstk nkssts
//
LOCUS       XP_040943879             807 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943879
VERSION     XP_040943879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087945.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..807
                     /product="uncharacterized protein"
                     /calculated_mol_wt=91919
     Region          6..165
                     /region_name="Agglutinin"
                     /note="Agglutinin domain; cl06484"
                     /db_xref="CDD:141938"
     Region          173..335
                     /region_name="Agglutinin"
                     /note="Agglutinin domain; cl06484"
                     /db_xref="CDD:141938"
     Region          344..>458
                     /region_name="Agglutinin"
                     /note="Agglutinin domain; cl06484"
                     /db_xref="CDD:141938"
     Region          494..629
                     /region_name="Agglutinin"
                     /note="Agglutinin domain; cl06484"
                     /db_xref="CDD:141938"
     Region          649..800
                     /region_name="PFM_HFR-2-like"
                     /note="pore-forming module of wheat HFR-2 toxin, FEM32,
                     and similar aerolysin-type beta-barrel pore-forming
                     proteins; cd20216"
                     /db_xref="CDD:380786"
     Region          681..730
                     /region_name="putative membrane-spanning region"
                     /note="putative membrane-spanning region [structural
                     motif]"
                     /db_xref="CDD:380786"
     Region          757..787
                     /region_name="putative variable loop region"
                     /note="putative variable loop region [structural motif]"
                     /db_xref="CDD:380786"
     CDS             1..807
                     /gene="LOC107903067"
                     /coded_by="XM_041087945.1:864..3287"
                     /db_xref="GeneID:107903067"
ORIGIN      
        1 maiawprfmv lkcearnkyl symhessnch gylrfsetla csphtkfeve rakcsgedgl
       61 vhikschnnk yckrvknvsi tgnskeqywi saaadkpeeg rseesctlfk lipvdtatnk
      121 irlmhvqsgc ylclwwvdsp tfnkcvlany kvfdgnscdl ftvidwella kpfasprfmv
      181 ikcearnkyl symyesydcn gyikfsetla fspytkfeve rakcsgedgl vhikschnkk
      241 yckrvknvsi tgnskeqywi saaadkpeeg rseesctlfk lipvdtatnk irimhvqsgc
      301 ylclwwvdsp tfnncvlany rvfdgnscdl ftvidwella nkpfssprfi vlkshqnnky
      361 lgfdhekgdy kdgylkfset rvaspyakfe veiaqrggid glvhirssqn nkylvsdetr
      421 itatarkpee drskksctlf klisvddaat dvqivhvqsr khlwviretp nlftsehlde
      481 ysrdmftiid weslvflprh vafkgnngqy lclrqigghp ylqfssgdig dagvtmevfm
      541 nndgsirikp agsnkfwrrs pnwiwadsdd ttsnnkdtlf rafkvndqti alrnlgnnnf
      601 ckslskegkt nclnadvssi tkevqlrvev pvlerkfyni kydldncriy desklviamn
      661 sasnytrkse slelklsytd thtrtwkanv slkvgakatm kfglpkifeg sielsgeiqt
      721 gfewedtktv tsmmdvlhkv vvppmtkvtv nltaingtcd vpftymqkdt lyngnivise
      781 vqggtytgsn yyslnfqtke eslsssv
//
LOCUS       XP_016684606             543 aa            linear   PLN 06-AUG-2024
DEFINITION  protein IQ-DOMAIN 14 [Gossypium hirsutum].
ACCESSION   XP_016684606
VERSION     XP_016684606.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684606.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..543
                     /product="protein IQ-DOMAIN 14"
                     /calculated_mol_wt=60951
     Region          <72..>151
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          156..185
                     /region_name="IQCD"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); cd23767"
                     /db_xref="CDD:467745"
     Region          <441..>481
                     /region_name="DUF4005"
                     /note="Protein of unknown function (DUF4005); pfam13178"
                     /db_xref="CDD:404128"
     CDS             1..543
                     /gene="LOC107903055"
                     /coded_by="XM_016829117.2:334..1965"
                     /db_xref="GeneID:107903055"
ORIGIN      
        1 mgkkgswfsa ikrvfvsnsk eklniesdkk ggkerkkkgq anykhgeans fiplfrepss
       61 iekilgeaer drklsfrpst ppdqlrtppf mlpraasprv rsqriaspra aspktasspr
      121 anspraaspf lppppraasp ragpprlvrp rleptlrnhh asatkiqaay rgymarrsfr
      181 alkglvrlqg vvrghnvkrq titamkymql lvrvqsqiqs rriqmlenqa rrqaqfkkdk
      241 eaesgfgkwt fgqsetgnen wddslltkee mearmqrkve avikrerama yayshqlwkd
      301 amksphtgvp nirsgvfpww wnwlerrlpp tdlpenqatk tfqftptmpn selkpsprpq
      361 ssqftfdnii diptpkstrs tilpttrpmq tptppsklvp qatnsgllns khsrprptii
      421 dspsnlplkd ddsltscppf svpnymtptv sakakarang nmkerfmgtp gneskrrlsf
      481 pltqgivgsl kwskgsslfs gkdsrsqrgl dkhqtlqslg nlsvdstvsm patmgrkpfn
      541 rfv
//
LOCUS       XP_016684542             589 aa            linear   PLN 06-AUG-2024
DEFINITION  BAG-associated GRAM protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016684542
VERSION     XP_016684542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829053.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..589
                     /product="BAG-associated GRAM protein 1 isoform X1"
                     /calculated_mol_wt=65731
     Region          81..177
                     /region_name="C2"
                     /note="C2 domain; cd00030"
                     /db_xref="CDD:175973"
     Region          238..346
                     /region_name="PH-GRAM_C2-GRAM"
                     /note="C2 and GRAM domain-containing protein Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13219"
                     /db_xref="CDD:270039"
     Region          403..549
                     /region_name="VASt"
                     /note="VAD1 Analog of StAR-related lipid transfer domain;
                     pfam16016"
                     /db_xref="CDD:464975"
     CDS             1..589
                     /gene="LOC107902951"
                     /coded_by="XM_016829053.2:366..2135"
                     /db_xref="GeneID:107902951"
ORIGIN      
        1 mmietgvvvd ylvpswwevk vavaasvfvi vsywffalqg kdgdggdrsq vsessaegil
       61 dekekivhsk gdvqtnsryl ikvellaakn liganlngts dpyaiitcgs ekrfssmvpg
      121 srnpmwgeef dfsvdelpvq invtiydwdi iwksavlgsv tilvdtegqs davwhtldst
      181 sgqvclhikt iklpvnsrgm ngyagantrr rissdkqgpt vvhqkpgplq tifnllpdev
      241 vehsyscale rsflyhgrmy vsawhicfhs nvfskqmkvv ipfgdideir rsqhafinpa
      301 itiilrmgag ghgvpplgss dgrvrykfas fwnrnhalra lqrasknyht mleaekkeia
      361 esalrahsss irgsrrqata pkdnaskpek sqafikeevl vgiyndvflc taeqfynlll
      421 sddssftney ravrkdtnls mgqwhpadey dglvreitfr ticnspmcpp dtamteyqrs
      481 ilspdkkklv fetvqqahdv pfgsyfevhc rwcvetngen ssildvkvga hfkkwcvmqs
      541 kirsgainey kkevevmldv arsyikshtt ggetnnssss ppviqqgis
//
LOCUS       XP_040943880             473 aa            linear   PLN 06-AUG-2024
DEFINITION  BAG-associated GRAM protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943880
VERSION     XP_040943880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087946.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..473
                     /product="BAG-associated GRAM protein 1 isoform X2"
                     /calculated_mol_wt=53115
     Region          <2..61
                     /region_name="C2"
                     /note="C2 domain; cd00030"
                     /db_xref="CDD:175973"
     Region          122..230
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          287..433
                     /region_name="VASt"
                     /note="VAD1 Analog of StAR-related lipid transfer domain;
                     pfam16016"
                     /db_xref="CDD:464975"
     CDS             1..473
                     /gene="LOC107902951"
                     /coded_by="XM_041087946.1:310..1731"
                     /db_xref="GeneID:107902951"
ORIGIN      
        1 mvpgsrnpmw geefdfsvde lpvqinvtiy dwdiiwksav lgsvtilvdt egqsdavwht
       61 ldstsgqvcl hiktiklpvn srgmngyaga ntrrrissdk qgptvvhqkp gplqtifnll
      121 pdevvehsys calersflyh grmyvsawhi cfhsnvfskq mkvvipfgdi deirrsqhaf
      181 inpaitiilr mgagghgvpp lgssdgrvry kfasfwnrnh alralqrask nyhtmleaek
      241 keiaesalra hsssirgsrr qatapkdnas kpeksqafik eevlvgiynd vflctaeqfy
      301 nlllsddssf tneyravrkd tnlsmgqwhp adeydglvre itfrticnsp mcppdtamte
      361 yqrsilspdk kklvfetvqq ahdvpfgsyf evhcrwcvet ngenssildv kvgahfkkwc
      421 vmqskirsga ineykkevev mldvarsyik shttggetnn ssssppviqq gis
//
LOCUS       XP_016684574             178 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH153 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016684574
VERSION     XP_016684574.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829085.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..178
                     /product="transcription factor bHLH153 isoform X1"
                     /calculated_mol_wt=19609
     Region          45..115
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(50..51,54,57..58,61,93..94,97..98,101,104,107..108,
                     111,114..115)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..178
                     /gene="LOC107903004"
                     /coded_by="XM_016829085.2:341..877"
                     /db_xref="GeneID:107903004"
ORIGIN      
        1 mqmqalcsce eaidigtmme nkrnpfsvdh tgftslaskr qkatkekkdq vseriaalqq
       61 lvspygkcll rllmelsvch scevmfgslq tdtasvllea mgyirflheq vkvlsapylq
      121 tipanslqdd dqyslrnrgl clapvsctvg larsngadiw apvkttspkf devisqfn
//
LOCUS       XP_016684578             161 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH153 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016684578
VERSION     XP_016684578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829089.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="transcription factor bHLH153 isoform X2"
                     /calculated_mol_wt=17784
     Region          28..98
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(33..34,37,40..41,44,76..77,80..81,84,87,90..91,94,
                     97..98)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..161
                     /gene="LOC107903004"
                     /coded_by="XM_016829089.2:293..778"
                     /db_xref="GeneID:107903004"
ORIGIN      
        1 mmenkrnpfs vdhtgftsla skrqkatkek kdqvseriaa lqqlvspygk cllrllmels
       61 vchscevmfg slqtdtasvl leamgyirfl heqvkvlsap ylqtipansl qdddqyslrn
      121 rglclapvsc tvglarsnga diwapvktts pkfdevisqf n
//
LOCUS       XP_016684582             161 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH153 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016684582
VERSION     XP_016684582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829093.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="transcription factor bHLH153 isoform X2"
                     /calculated_mol_wt=17784
     Region          28..98
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(33..34,37,40..41,44,76..77,80..81,84,87,90..91,94,
                     97..98)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..161
                     /gene="LOC107903004"
                     /coded_by="XM_016829093.2:289..774"
                     /db_xref="GeneID:107903004"
ORIGIN      
        1 mmenkrnpfs vdhtgftsla skrqkatkek kdqvseriaa lqqlvspygk cllrllmels
       61 vchscevmfg slqtdtasvl leamgyirfl heqvkvlsap ylqtipansl qdddqyslrn
      121 rglclapvsc tvglarsnga diwapvktts pkfdevisqf n
//
LOCUS       XP_040943882             161 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH153 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943882
VERSION     XP_040943882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087948.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="transcription factor bHLH153 isoform X2"
                     /calculated_mol_wt=17784
     Region          28..98
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(33..34,37,40..41,44,76..77,80..81,84,87,90..91,94,
                     97..98)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..161
                     /gene="LOC107903004"
                     /coded_by="XM_041087948.1:386..871"
                     /db_xref="GeneID:107903004"
ORIGIN      
        1 mmenkrnpfs vdhtgftsla skrqkatkek kdqvseriaa lqqlvspygk cllrllmels
       61 vchscevmfg slqtdtasvl leamgyirfl heqvkvlsap ylqtipansl qdddqyslrn
      121 rglclapvsc tvglarsnga diwapvktts pkfdevisqf n
//
LOCUS       XP_016684586             155 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH153 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016684586
VERSION     XP_016684586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829097.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="transcription factor bHLH153 isoform X3"
                     /calculated_mol_wt=17014
     Region          45..92
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(50..51,54,57..58,61,70..71,74..75,78,81,84..85,88,
                     91..92)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..155
                     /gene="LOC107903004"
                     /coded_by="XM_016829097.2:493..960"
                     /db_xref="GeneID:107903004"
ORIGIN      
        1 mqmqalcsce eaidigtmme nkrnpfsvdh tgftslaskr qkatkekkdq vseriaalqq
       61 lvspygktdt asvlleamgy irflheqvkv lsapylqtip anslqdddqy slrnrglcla
      121 pvsctvglar sngadiwapv kttspkfdev isqfn
//
LOCUS       XP_016684551             518 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 2A [Gossypium hirsutum].
ACCESSION   XP_016684551
VERSION     XP_016684551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829062.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="eukaryotic translation initiation factor 2A"
                     /calculated_mol_wt=56561
     Region          24..>471
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          219..412
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          281..317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..360
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          366..402
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..518
                     /gene="LOC107902972"
                     /coded_by="XM_016829062.2:231..1787"
                     /db_xref="GeneID:107902972"
ORIGIN      
        1 maaavetspv leilvrepdg ysiwngppfk nnnqpgikle kvpcnnakys edgsrimvtk
       61 mdsaigiyds ntlkeircfq ipnvvasals pcgaylqtfq ksttpqeknv vlwsietgdp
      121 vyeqfqknmt katwpsirfs sdeavacrla tneiqffdaa dfskgishrl rvpgvaavel
      181 srapgshvaa fvpeskgspa svqiyacake lqsqplarrs ffrcstvqlh wnhgstgllv
      241 vvqsdvdktn qsyygesklh ylttdgafeg lvplrkegpi hdvqwsysgk efavvygfmp
      301 asatvfdkkc kpvqeiasgp yntirwnpkg kllclagfgn lpgdmafwdi idkkqlgttr
      361 aecsvtsews adgcyfmtat taprlqvdnc vkifnyngsl lfkkmfnklf qadwkpespd
      421 kfgeiaelik svgsvkieet kslgqgsttk kpasanppaq kpaayrppha knaavvqael
      481 fggsstgems knalknkkkr ekqkekkaae aaaasgat
//
LOCUS       XP_016684556             518 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 2A [Gossypium hirsutum].
ACCESSION   XP_016684556
VERSION     XP_016684556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829067.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="eukaryotic translation initiation factor 2A"
                     /calculated_mol_wt=56561
     Region          24..>471
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          219..412
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          281..317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..360
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          366..402
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..518
                     /gene="LOC107902972"
                     /coded_by="XM_016829067.2:219..1775"
                     /db_xref="GeneID:107902972"
ORIGIN      
        1 maaavetspv leilvrepdg ysiwngppfk nnnqpgikle kvpcnnakys edgsrimvtk
       61 mdsaigiyds ntlkeircfq ipnvvasals pcgaylqtfq ksttpqeknv vlwsietgdp
      121 vyeqfqknmt katwpsirfs sdeavacrla tneiqffdaa dfskgishrl rvpgvaavel
      181 srapgshvaa fvpeskgspa svqiyacake lqsqplarrs ffrcstvqlh wnhgstgllv
      241 vvqsdvdktn qsyygesklh ylttdgafeg lvplrkegpi hdvqwsysgk efavvygfmp
      301 asatvfdkkc kpvqeiasgp yntirwnpkg kllclagfgn lpgdmafwdi idkkqlgttr
      361 aecsvtsews adgcyfmtat taprlqvdnc vkifnyngsl lfkkmfnklf qadwkpespd
      421 kfgeiaelik svgsvkieet kslgqgsttk kpasanppaq kpaayrppha knaavvqael
      481 fggsstgems knalknkkkr ekqkekkaae aaaasgat
//
LOCUS       XP_016684562             518 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 2A [Gossypium hirsutum].
ACCESSION   XP_016684562
VERSION     XP_016684562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829073.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="eukaryotic translation initiation factor 2A"
                     /calculated_mol_wt=56561
     Region          24..>471
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          219..412
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          281..317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..360
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          366..402
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..518
                     /gene="LOC107902972"
                     /coded_by="XM_016829073.2:177..1733"
                     /db_xref="GeneID:107902972"
ORIGIN      
        1 maaavetspv leilvrepdg ysiwngppfk nnnqpgikle kvpcnnakys edgsrimvtk
       61 mdsaigiyds ntlkeircfq ipnvvasals pcgaylqtfq ksttpqeknv vlwsietgdp
      121 vyeqfqknmt katwpsirfs sdeavacrla tneiqffdaa dfskgishrl rvpgvaavel
      181 srapgshvaa fvpeskgspa svqiyacake lqsqplarrs ffrcstvqlh wnhgstgllv
      241 vvqsdvdktn qsyygesklh ylttdgafeg lvplrkegpi hdvqwsysgk efavvygfmp
      301 asatvfdkkc kpvqeiasgp yntirwnpkg kllclagfgn lpgdmafwdi idkkqlgttr
      361 aecsvtsews adgcyfmtat taprlqvdnc vkifnyngsl lfkkmfnklf qadwkpespd
      421 kfgeiaelik svgsvkieet kslgqgsttk kpasanppaq kpaayrppha knaavvqael
      481 fggsstgems knalknkkkr ekqkekkaae aaaasgat
//
LOCUS       XP_016684566             518 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 2A [Gossypium hirsutum].
ACCESSION   XP_016684566
VERSION     XP_016684566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829077.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="eukaryotic translation initiation factor 2A"
                     /calculated_mol_wt=56561
     Region          24..>471
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          219..412
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          281..317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..360
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          366..402
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..518
                     /gene="LOC107902972"
                     /coded_by="XM_016829077.2:26..1582"
                     /db_xref="GeneID:107902972"
ORIGIN      
        1 maaavetspv leilvrepdg ysiwngppfk nnnqpgikle kvpcnnakys edgsrimvtk
       61 mdsaigiyds ntlkeircfq ipnvvasals pcgaylqtfq ksttpqeknv vlwsietgdp
      121 vyeqfqknmt katwpsirfs sdeavacrla tneiqffdaa dfskgishrl rvpgvaavel
      181 srapgshvaa fvpeskgspa svqiyacake lqsqplarrs ffrcstvqlh wnhgstgllv
      241 vvqsdvdktn qsyygesklh ylttdgafeg lvplrkegpi hdvqwsysgk efavvygfmp
      301 asatvfdkkc kpvqeiasgp yntirwnpkg kllclagfgn lpgdmafwdi idkkqlgttr
      361 aecsvtsews adgcyfmtat taprlqvdnc vkifnyngsl lfkkmfnklf qadwkpespd
      421 kfgeiaelik svgsvkieet kslgqgsttk kpasanppaq kpaayrppha knaavvqael
      481 fggsstgems knalknkkkr ekqkekkaae aaaasgat
//
LOCUS       XP_016684511            1465 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016684511
VERSION     XP_016684511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829022.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1465
                     /product="disease resistance protein At4g27190 isoform X1"
                     /calculated_mol_wt=165935
     Region          27..171
                     /region_name="VASt"
                     /note="VAD1 Analog of StAR-related lipid transfer domain;
                     pfam16016"
                     /db_xref="CDD:464975"
     Region          605..837
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          886..>1107
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1007..1031
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1032..1054
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1055..1078
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1079..1101
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1465
                     /gene="LOC107902903"
                     /coded_by="XM_016829022.2:359..4756"
                     /db_xref="GeneID:107902903"
ORIGIN      
        1 mapkdnaskp eksqafikee vlvgihndvf pctaeqfynl lliddcsftn eyravrkdtn
       61 lsmgqwhpad eydglvreit frticnspmc ppdtamteyq hsilspdkkk lvfetvqqah
      121 dvpfgsyfev hcrwcvetsg enssildvkv gahfkkwcvm qskirsgsin eykkevevml
      181 dvarsyiksq taggeinyss ssppviqqge mdfrqdtvfs hvvswckkit gakrrkkiyp
      241 slrpkteylf dlrdsvkeem ikelmvgtkr tkecrewlik vrefeanake llqfhekisd
      301 nlrfskkqph adlmnvldei trllessplq ratrtrsssm iegksfglae rtsnaylrsk
      361 tedpvqdlea arsramgkev ekgkeillik ygtkllsssr kaegdqkprn ltkkkgsffs
      421 lpqvetkdgs tttvgsmidm eapssgnsga fwsesslits sslpsdgvdl ktkpeevsss
      481 qtnilptagq etelisfeee eaeeetkpsq rpeisktvln eieeissshe tesetslpaa
      541 sqipkslktv npsveppiev gafispqrei fsldrlpvas weeeillpde vgtkvpsqtd
      601 akanvertvl kilellsndt vrrigvcgtg kvgkttvlka fidhpqindm fdliiwvtvs
      661 kywsirkmqd evlrqlstdf kaesenreel lrylegrkfl lvlddvwesi dleavgipnp
      721 ssengsaiil atrnlevcnn mrfinmievg tlsneeawkl fceqvgrvvn ipgilpfarv
      781 iaercgglpl lvivtgrals geedvfaweq afkqfsgpcg dlrsrndiiq llkfsfdrlq
      841 vhdiqtcflh calfpedqev nisefvtyci eegliagnta daykrsheii tvltraflle
      901 ttsnssiimh dmirdlalai llqekdsqfl lrayskpvsr enhsslvlre spennrlfip
      961 dgcqfilrgg srltqppsve ewgkssmifl mdnnlsalpe spscpglltl flqrnfrlrv
     1021 iavsffdcmp clkvlnlsnt rikslpgtis klvsletlil rhcerlsmlp sdigslkllq
     1081 vldlrgtein llpdeigels sltyfdicfy gsinrrehlk lpqglissgi isrlcalqsl
     1141 girvcpgder wdkcvksiiy evskltglts lsfyfpevel lelflqksaa widqclteyn
     1201 fvvghdikri vsrvpqyvel dydrtsqrlr fvngekipda ivkvlaycsa fyldhhldvi
     1261 siskfgianm nklkhcivse cptvkavled keftevvfpc lehlnlhylw nleyicddll
     1321 pegsfamlri lyvhacpklk yvlkssmlrf fskleelivd dctaiekiil ddtdlshmsd
     1381 ssfkrltlhy lpaletireg vwpsfkyisv cncpnfkkin ldskskhtlk gikgekdwwd
     1441 slqwkepsls ihfndlftlv seddi
//
LOCUS       XP_016684504            1465 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016684504
VERSION     XP_016684504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829015.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1465
                     /product="disease resistance protein At4g27190 isoform X1"
                     /calculated_mol_wt=165935
     Region          27..171
                     /region_name="VASt"
                     /note="VAD1 Analog of StAR-related lipid transfer domain;
                     pfam16016"
                     /db_xref="CDD:464975"
     Region          605..837
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          886..>1107
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1007..1031
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1032..1054
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1055..1078
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1079..1101
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1465
                     /gene="LOC107902903"
                     /coded_by="XM_016829015.2:402..4799"
                     /db_xref="GeneID:107902903"
ORIGIN      
        1 mapkdnaskp eksqafikee vlvgihndvf pctaeqfynl lliddcsftn eyravrkdtn
       61 lsmgqwhpad eydglvreit frticnspmc ppdtamteyq hsilspdkkk lvfetvqqah
      121 dvpfgsyfev hcrwcvetsg enssildvkv gahfkkwcvm qskirsgsin eykkevevml
      181 dvarsyiksq taggeinyss ssppviqqge mdfrqdtvfs hvvswckkit gakrrkkiyp
      241 slrpkteylf dlrdsvkeem ikelmvgtkr tkecrewlik vrefeanake llqfhekisd
      301 nlrfskkqph adlmnvldei trllessplq ratrtrsssm iegksfglae rtsnaylrsk
      361 tedpvqdlea arsramgkev ekgkeillik ygtkllsssr kaegdqkprn ltkkkgsffs
      421 lpqvetkdgs tttvgsmidm eapssgnsga fwsesslits sslpsdgvdl ktkpeevsss
      481 qtnilptagq etelisfeee eaeeetkpsq rpeisktvln eieeissshe tesetslpaa
      541 sqipkslktv npsveppiev gafispqrei fsldrlpvas weeeillpde vgtkvpsqtd
      601 akanvertvl kilellsndt vrrigvcgtg kvgkttvlka fidhpqindm fdliiwvtvs
      661 kywsirkmqd evlrqlstdf kaesenreel lrylegrkfl lvlddvwesi dleavgipnp
      721 ssengsaiil atrnlevcnn mrfinmievg tlsneeawkl fceqvgrvvn ipgilpfarv
      781 iaercgglpl lvivtgrals geedvfaweq afkqfsgpcg dlrsrndiiq llkfsfdrlq
      841 vhdiqtcflh calfpedqev nisefvtyci eegliagnta daykrsheii tvltraflle
      901 ttsnssiimh dmirdlalai llqekdsqfl lrayskpvsr enhsslvlre spennrlfip
      961 dgcqfilrgg srltqppsve ewgkssmifl mdnnlsalpe spscpglltl flqrnfrlrv
     1021 iavsffdcmp clkvlnlsnt rikslpgtis klvsletlil rhcerlsmlp sdigslkllq
     1081 vldlrgtein llpdeigels sltyfdicfy gsinrrehlk lpqglissgi isrlcalqsl
     1141 girvcpgder wdkcvksiiy evskltglts lsfyfpevel lelflqksaa widqclteyn
     1201 fvvghdikri vsrvpqyvel dydrtsqrlr fvngekipda ivkvlaycsa fyldhhldvi
     1261 siskfgianm nklkhcivse cptvkavled keftevvfpc lehlnlhylw nleyicddll
     1321 pegsfamlri lyvhacpklk yvlkssmlrf fskleelivd dctaiekiil ddtdlshmsd
     1381 ssfkrltlhy lpaletireg vwpsfkyisv cncpnfkkin ldskskhtlk gikgekdwwd
     1441 slqwkepsls ihfndlftlv seddi
//
LOCUS       XP_016684516            1306 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016684516
VERSION     XP_016684516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1306
                     /product="disease resistance protein At4g27190 isoform X2"
                     /calculated_mol_wt=147769
     Region          446..678
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <831..>948
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          848..872
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          873..895
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          896..919
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          920..942
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1306
                     /gene="LOC107902903"
                     /coded_by="XM_016829027.2:349..4269"
                     /db_xref="GeneID:107902903"
ORIGIN      
        1 mqskirsgsi neykkevevm ldvarsyiks qtaggeinys sssppviqqg emdfrqdtvf
       61 shvvswckki tgakrrkkiy pslrpkteyl fdlrdsvkee mikelmvgtk rtkecrewli
      121 kvrefeanak ellqfhekis dnlrfskkqp hadlmnvlde itrllesspl qratrtrsss
      181 miegksfgla ertsnaylrs ktedpvqdle aarsramgke vekgkeilli kygtkllsss
      241 rkaegdqkpr nltkkkgsff slpqvetkdg stttvgsmid meapssgnsg afwsesslit
      301 ssslpsdgvd lktkpeevss sqtnilptag qetelisfee eeaeeetkps qrpeisktvl
      361 neieeisssh etesetslpa asqipkslkt vnpsveppie vgafispqre ifsldrlpva
      421 sweeeillpd evgtkvpsqt dakanvertv lkilellsnd tvrrigvcgt gkvgkttvlk
      481 afidhpqind mfdliiwvtv skywsirkmq devlrqlstd fkaesenree llrylegrkf
      541 llvlddvwes idleavgipn pssengsaii latrnlevcn nmrfinmiev gtlsneeawk
      601 lfceqvgrvv nipgilpfar viaercgglp llvivtgral sgeedvfawe qafkqfsgpc
      661 gdlrsrndii qllkfsfdrl qvhdiqtcfl hcalfpedqe vnisefvtyc ieegliagnt
      721 adaykrshei itvltrafll ettsnssiim hdmirdlala illqekdsqf llrayskpvs
      781 renhsslvlr espennrlfi pdgcqfilrg gsrltqppsv eewgkssmif lmdnnlsalp
      841 espscpgllt lflqrnfrlr viavsffdcm pclkvlnlsn trikslpgti sklvsletli
      901 lrhcerlsml psdigslkll qvldlrgtei nllpdeigel ssltyfdicf ygsinrrehl
      961 klpqglissg iisrlcalqs lgirvcpgde rwdkcvksii yevskltglt slsfyfpeve
     1021 llelflqksa awidqcltey nfvvghdikr ivsrvpqyve ldydrtsqrl rfvngekipd
     1081 aivkvlaycs afyldhhldv isiskfgian mnklkhcivs ecptvkavle dkeftevvfp
     1141 clehlnlhyl wnleyicddl lpegsfamlr ilyvhacpkl kyvlkssmlr ffskleeliv
     1201 ddctaiekii lddtdlshms dssfkrltlh ylpaletire gvwpsfkyis vcncpnfkki
     1261 nldskskhtl kgikgekdww dslqwkepsl sihfndlftl vseddi
//
LOCUS       XP_016684520            1255 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016684520
VERSION     XP_016684520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1255
                     /product="disease resistance protein At4g27190 isoform X3"
                     /calculated_mol_wt=142166
     Region          395..627
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <780..>897
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          797..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          822..844
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          845..868
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          869..891
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1255
                     /gene="LOC107902903"
                     /coded_by="XM_016829031.2:237..4004"
                     /db_xref="GeneID:107902903"
ORIGIN      
        1 mdfrqdtvfs hvvswckkit gakrrkkiyp slrpkteylf dlrdsvkeem ikelmvgtkr
       61 tkecrewlik vrefeanake llqfhekisd nlrfskkqph adlmnvldei trllessplq
      121 ratrtrsssm iegksfglae rtsnaylrsk tedpvqdlea arsramgkev ekgkeillik
      181 ygtkllsssr kaegdqkprn ltkkkgsffs lpqvetkdgs tttvgsmidm eapssgnsga
      241 fwsesslits sslpsdgvdl ktkpeevsss qtnilptagq etelisfeee eaeeetkpsq
      301 rpeisktvln eieeissshe tesetslpaa sqipkslktv npsveppiev gafispqrei
      361 fsldrlpvas weeeillpde vgtkvpsqtd akanvertvl kilellsndt vrrigvcgtg
      421 kvgkttvlka fidhpqindm fdliiwvtvs kywsirkmqd evlrqlstdf kaesenreel
      481 lrylegrkfl lvlddvwesi dleavgipnp ssengsaiil atrnlevcnn mrfinmievg
      541 tlsneeawkl fceqvgrvvn ipgilpfarv iaercgglpl lvivtgrals geedvfaweq
      601 afkqfsgpcg dlrsrndiiq llkfsfdrlq vhdiqtcflh calfpedqev nisefvtyci
      661 eegliagnta daykrsheii tvltraflle ttsnssiimh dmirdlalai llqekdsqfl
      721 lrayskpvsr enhsslvlre spennrlfip dgcqfilrgg srltqppsve ewgkssmifl
      781 mdnnlsalpe spscpglltl flqrnfrlrv iavsffdcmp clkvlnlsnt rikslpgtis
      841 klvsletlil rhcerlsmlp sdigslkllq vldlrgtein llpdeigels sltyfdicfy
      901 gsinrrehlk lpqglissgi isrlcalqsl girvcpgder wdkcvksiiy evskltglts
      961 lsfyfpevel lelflqksaa widqclteyn fvvghdikri vsrvpqyvel dydrtsqrlr
     1021 fvngekipda ivkvlaycsa fyldhhldvi siskfgianm nklkhcivse cptvkavled
     1081 keftevvfpc lehlnlhylw nleyicddll pegsfamlri lyvhacpklk yvlkssmlrf
     1141 fskleelivd dctaiekiil ddtdlshmsd ssfkrltlhy lpaletireg vwpsfkyisv
     1201 cncpnfkkin ldskskhtlk gikgekdwwd slqwkepsls ihfndlftlv seddi
//
LOCUS       XP_016684526            1255 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016684526
VERSION     XP_016684526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829037.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1255
                     /product="disease resistance protein At4g27190 isoform X3"
                     /calculated_mol_wt=142166
     Region          395..627
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <780..>897
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          797..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          822..844
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          845..868
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          869..891
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1255
                     /gene="LOC107902903"
                     /coded_by="XM_016829037.2:197..3964"
                     /db_xref="GeneID:107902903"
ORIGIN      
        1 mdfrqdtvfs hvvswckkit gakrrkkiyp slrpkteylf dlrdsvkeem ikelmvgtkr
       61 tkecrewlik vrefeanake llqfhekisd nlrfskkqph adlmnvldei trllessplq
      121 ratrtrsssm iegksfglae rtsnaylrsk tedpvqdlea arsramgkev ekgkeillik
      181 ygtkllsssr kaegdqkprn ltkkkgsffs lpqvetkdgs tttvgsmidm eapssgnsga
      241 fwsesslits sslpsdgvdl ktkpeevsss qtnilptagq etelisfeee eaeeetkpsq
      301 rpeisktvln eieeissshe tesetslpaa sqipkslktv npsveppiev gafispqrei
      361 fsldrlpvas weeeillpde vgtkvpsqtd akanvertvl kilellsndt vrrigvcgtg
      421 kvgkttvlka fidhpqindm fdliiwvtvs kywsirkmqd evlrqlstdf kaesenreel
      481 lrylegrkfl lvlddvwesi dleavgipnp ssengsaiil atrnlevcnn mrfinmievg
      541 tlsneeawkl fceqvgrvvn ipgilpfarv iaercgglpl lvivtgrals geedvfaweq
      601 afkqfsgpcg dlrsrndiiq llkfsfdrlq vhdiqtcflh calfpedqev nisefvtyci
      661 eegliagnta daykrsheii tvltraflle ttsnssiimh dmirdlalai llqekdsqfl
      721 lrayskpvsr enhsslvlre spennrlfip dgcqfilrgg srltqppsve ewgkssmifl
      781 mdnnlsalpe spscpglltl flqrnfrlrv iavsffdcmp clkvlnlsnt rikslpgtis
      841 klvsletlil rhcerlsmlp sdigslkllq vldlrgtein llpdeigels sltyfdicfy
      901 gsinrrehlk lpqglissgi isrlcalqsl girvcpgder wdkcvksiiy evskltglts
      961 lsfyfpevel lelflqksaa widqclteyn fvvghdikri vsrvpqyvel dydrtsqrlr
     1021 fvngekipda ivkvlaycsa fyldhhldvi siskfgianm nklkhcivse cptvkavled
     1081 keftevvfpc lehlnlhylw nleyicddll pegsfamlri lyvhacpklk yvlkssmlrf
     1141 fskleelivd dctaiekiil ddtdlshmsd ssfkrltlhy lpaletireg vwpsfkyisv
     1201 cncpnfkkin ldskskhtlk gikgekdwwd slqwkepsls ihfndlftlv seddi
//
LOCUS       XP_040943884            1255 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein At4g27190 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040943884
VERSION     XP_040943884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087950.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1255
                     /product="disease resistance protein At4g27190 isoform X3"
                     /calculated_mol_wt=142166
     Region          395..627
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <780..>897
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          797..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          822..844
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          845..868
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          869..891
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1255
                     /gene="LOC107902903"
                     /coded_by="XM_041087950.1:252..4019"
                     /db_xref="GeneID:107902903"
ORIGIN      
        1 mdfrqdtvfs hvvswckkit gakrrkkiyp slrpkteylf dlrdsvkeem ikelmvgtkr
       61 tkecrewlik vrefeanake llqfhekisd nlrfskkqph adlmnvldei trllessplq
      121 ratrtrsssm iegksfglae rtsnaylrsk tedpvqdlea arsramgkev ekgkeillik
      181 ygtkllsssr kaegdqkprn ltkkkgsffs lpqvetkdgs tttvgsmidm eapssgnsga
      241 fwsesslits sslpsdgvdl ktkpeevsss qtnilptagq etelisfeee eaeeetkpsq
      301 rpeisktvln eieeissshe tesetslpaa sqipkslktv npsveppiev gafispqrei
      361 fsldrlpvas weeeillpde vgtkvpsqtd akanvertvl kilellsndt vrrigvcgtg
      421 kvgkttvlka fidhpqindm fdliiwvtvs kywsirkmqd evlrqlstdf kaesenreel
      481 lrylegrkfl lvlddvwesi dleavgipnp ssengsaiil atrnlevcnn mrfinmievg
      541 tlsneeawkl fceqvgrvvn ipgilpfarv iaercgglpl lvivtgrals geedvfaweq
      601 afkqfsgpcg dlrsrndiiq llkfsfdrlq vhdiqtcflh calfpedqev nisefvtyci
      661 eegliagnta daykrsheii tvltraflle ttsnssiimh dmirdlalai llqekdsqfl
      721 lrayskpvsr enhsslvlre spennrlfip dgcqfilrgg srltqppsve ewgkssmifl
      781 mdnnlsalpe spscpglltl flqrnfrlrv iavsffdcmp clkvlnlsnt rikslpgtis
      841 klvsletlil rhcerlsmlp sdigslkllq vldlrgtein llpdeigels sltyfdicfy
      901 gsinrrehlk lpqglissgi isrlcalqsl girvcpgder wdkcvksiiy evskltglts
      961 lsfyfpevel lelflqksaa widqclteyn fvvghdikri vsrvpqyvel dydrtsqrlr
     1021 fvngekipda ivkvlaycsa fyldhhldvi siskfgianm nklkhcivse cptvkavled
     1081 keftevvfpc lehlnlhylw nleyicddll pegsfamlri lyvhacpklk yvlkssmlrf
     1141 fskleelivd dctaiekiil ddtdlshmsd ssfkrltlhy lpaletireg vwpsfkyisv
     1201 cncpnfkkin ldskskhtlk gikgekdwwd slqwkepsls ihfndlftlv seddi
//
LOCUS       XP_016684533            1040 aa            linear   PLN 06-AUG-2024
DEFINITION  putative disease resistance protein RGA1 [Gossypium hirsutum].
ACCESSION   XP_016684533
VERSION     XP_016684533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1040
                     /product="putative disease resistance protein RGA1"
                     /calculated_mol_wt=117339
     Region          5..97
                     /region_name="Rx_N"
                     /note="Rx N-terminal domain; pfam18052"
                     /db_xref="CDD:436239"
     Region          155..>964
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          159..401
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
     Region          <523..>650
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          529..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          553..575
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          576..598
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          599..622
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          837..856
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          857..878
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          925..948
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <945..>1004
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          949..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          972..995
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1040
                     /gene="LOC107902939"
                     /coded_by="XM_016829044.2:1..3123"
                     /db_xref="GeneID:107902939"
ORIGIN      
        1 madsivspll qsllnrldsi clsigggrgg deiltrsrsv vaavkdlatv aeqrfemave
       61 iklwltevkr layrlsylld dyeqqkrkvr nqklmsccfg fftktgdwrp ianvlqklat
      121 lagegnwple snwrpdlyfr lnsgsgtssl gleleivgrd tdrdkvisll lseakeicgv
      181 vsivgdggvg kttlarlvyn dealgrnfrf kywislgngl rfnverigea icsknftslv
      241 dlmdgvrrel lrkrflvvld nlcieemdlw fmlensftvg spgstvlimt rsvevaesld
      301 smplyylqpl hdadcldmfw kvamlpseek eekqniellq iskilvahcg glplavkvlg
      361 allpyngemg dwlsaatlal lelqkysyts nilpvlrlsy dllpsnlkqc faycsifpre
      421 ywiskekllq lwksegflqt sgsffediae dcfmkllqrl ffedivrdes gnmfcrmpnv
      481 vydfvltvsl atcsvvgpev vsnelhhcsl vfesepstql rylcnkedlr tllfisskfd
      541 sipdtifsrl nhlhvldfsq sgiselpvsl galkhlryld asrtyirkip etiinlkylq
      601 tmelsecynl eelpktvpql tslvnlgvss ccsltylpsg ieklrllekl ptcvlgkqsd
      661 saklnelnel dlkerleikn lenvtkeaea qgaelfkkvs idslelswgh sgvmsaqmsa
      721 kileylyppl nlrdfclkgy kgsrfpswmn wglrnlssis liscscqtlp plgqlpslkf
      781 lylkgmsevq llgpefygdg gfpcleqlei ydmpnlvewm siegssgpls levfpcldkl
      841 vvkgchrltv lpvipnlrsl glcdsnemll hsvvhlpsly slvvekfklk fltfcfknfs
      901 iekltfydcd nldhlfennq apsslkhlsi lycdrlmsls ldlrsltslq rfdvmeckql
      961 rdisglvslg sleelsivsc pmlqsltsgi pyltnlqrlv ikgcpasqgc lekkngwdws
     1021 kiahipylei ehkelvledk
//
LOCUS       XP_016684492             558 aa            linear   PLN 06-AUG-2024
DEFINITION  2,3-bisphosphoglycerate-independent phosphoglycerate mutase isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016684492
VERSION     XP_016684492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829003.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..558
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase isoform X1"
                     /calculated_mol_wt=60854
     Region          1..555
                     /region_name="PLN02538"
                     /note="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /db_xref="CDD:215295"
     CDS             1..558
                     /gene="LOC107902893"
                     /coded_by="XM_016829003.2:238..1914"
                     /db_xref="GeneID:107902893"
ORIGIN      
        1 massgqvsfk ledhpklpkg kriavvvldg wgeykpdqyn cihvaqtptm dslkqgapdr
       61 wrlirahgna vglpteddmg nsevghnalg agrifaqgak lvdlalasgk iydgegfkyi
      121 sesfekgtlh ligllsdggv hsrldqlqll lkgasergak rirvhvltdg rdvldgssvg
      181 fvetlendla klrekgvdar iasgggrmyv tmdryendwd vvkrgwdaqv lgeaphkfkn
      241 aveavkklre nandqylppf vivddnnkav gpivdgdavv tinfradrmv mlakaleyqd
      301 fnkfdrvrvp kiryagmlqy dgelklpsry lvsppeidrt sgeylvhngv rtfacsetvk
      361 fghvtffwng nrsgyfnpqm eeyveipsdv gitfnvqpkm kaleigekar dailsgkfdq
      421 vrvnipngdm vghtgdieat vvackaadea vkmildaieq vggiyivtad hgnaedmvkr
      481 nksgeplldk ngdlqiltsh tcqpvpiaig gpglapgvrf rsdvpnggla nvaatvmnlh
      541 gfvapndyet tlievadn
//
LOCUS       XP_040943885             558 aa            linear   PLN 06-AUG-2024
DEFINITION  2,3-bisphosphoglycerate-independent phosphoglycerate mutase isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040943885
VERSION     XP_040943885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087951.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..558
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase isoform X2"
                     /calculated_mol_wt=60854
     Region          1..555
                     /region_name="PLN02538"
                     /note="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /db_xref="CDD:215295"
     CDS             1..558
                     /gene="LOC107902893"
                     /coded_by="XM_041087951.1:59..1735"
                     /db_xref="GeneID:107902893"
ORIGIN      
        1 massgqvsfk ledhpklpkg kriavvvldg wgeykpdqyn cihvaqtptm dslkqgapdr
       61 wrlirahgna vglpteddmg nsevghnalg agrifaqgak lvdlalasgk iydgegfkyi
      121 sesfekgtlh ligllsdggv hsrldqlqll lkgasergak rirvhvltdg rdvldgssvg
      181 fvetlendla klrekgvdar iasgggrmyv tmdryendwd vvkrgwdaqv lgeaphkfkn
      241 aveavkklre nandqylppf vivddnnkav gpivdgdavv tinfradrmv mlakaleyqd
      301 fnkfdrvrvp kiryagmlqy dgelklpsry lvsppeidrt sgeylvhngv rtfacsetvk
      361 fghvtffwng nrsgyfnpqm eeyveipsdv gitfnvqpkm kaleigekar dailsgkfdq
      421 vrvnipngdm vghtgdieat vvackaadea vkmildaieq vggiyivtad hgnaedmvkr
      481 nksgeplldk ngdlqiltsh tcqpvpiaig gpglapgvrf rsdvpnggla nvaatvmnlh
      541 gfvapndyet tlievadn
//
LOCUS       XP_016684450             514 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684450
VERSION     XP_016684450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828961.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..514
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58352
     Region          8..154
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..514
                     /gene="LOC107902846"
                     /coded_by="XM_016828961.2:57..1601"
                     /db_xref="GeneID:107902846"
ORIGIN      
        1 mnnpklkgyg fkpsdqilid ylrdrtlfgr dylvqdiidl ghdicnydpw dlpscdsitp
       61 sdserffiyp ktykyansks kvigtptgqv pkgeqrqpmi nratkngnwk vsgdpvdvks
      121 gddtkqvigi ktrlyfrhns cpnktpwmly qfelvdidpc kdkyflgkvi mkkptnissn
      181 niddqisipq vraelglepl vetevtneye wtqseqtnef itpypvfnne nfiddgnevi
      241 shhqsqvqve lsseslvete vtneygltqs eqtnefitpc pvfdnenfid dwnevisnhq
      301 sqvqvelsse plveievtne yrwtqseqtn efitpcpvld iddgnevisn nqsqinmeii
      361 rslevllgiv dqnqsyqnig idndrtvpde gsnqhsivae nessilpsdl hnhlidfinq
      421 mewsdlynlc rsigvfldel pdepqelgpq nqcginqqla agakidctnl ppsdvaessy
      481 stdsvrkrsa meverlatgv etelaqqqak rsrl
//
LOCUS       XP_016684461             445 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 86 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016684461
VERSION     XP_016684461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828972.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..445
                     /product="NAC domain-containing protein 86 isoform X1"
                     /calculated_mol_wt=50710
     Region          8..154
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..445
                     /gene="LOC107902856"
                     /coded_by="XM_016828972.2:54..1391"
                     /db_xref="GeneID:107902856"
ORIGIN      
        1 mnnlklkgyg fnpseqilig ylrdrttsgr dylvqdiidl shdicsydpw dlpgcdsitp
       61 hdserffiyp ktykyansks kvigtpteqv pnsdqrqpmi nratkngkwk vsgvrvnvks
      121 sdetkqvigi ktrlyfkhnn cpnktscvlh qfelvdidpc qdkyflgkvi mkefkptnis
      181 snnlndrisi pevrvelgpe plvetevtne yewtqseqtn efitpypvfd nensiddgne
      241 gisnyqsqir velgleplak eygwtqsert nefrtpcpvf dnenfiddgn evssnhqsqi
      301 nmeqirslev pnigiedqnq syqnigidmn dptvpdegsn lqnivavaen essilpsnlh
      361 nllidiilyf inqiewsdly klcrfinqqr aagaeiefpn lppldvaess ystdsvrkrs
      421 ameverlatg vetelaqqqa krsrl
//
LOCUS       XP_016684467             370 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 86 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016684467
VERSION     XP_016684467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828978.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="NAC domain-containing protein 86 isoform X2"
                     /calculated_mol_wt=42321
     Region          8..154
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..370
                     /gene="LOC107902856"
                     /coded_by="XM_016828978.2:54..1166"
                     /db_xref="GeneID:107902856"
ORIGIN      
        1 mnnlklkgyg fnpseqilig ylrdrttsgr dylvqdiidl shdicsydpw dlpgcdsitp
       61 hdserffiyp ktykyansks kvigtpteqv pnsdqrqpmi nratkngkwk vsgvrvnvks
      121 sdetkqvigi ktrlyfkhnn cpnktscvlh qfelvdidpc qdkyflgkvi mkefkptnis
      181 snnlndrisi pevrvelgpe plvetevtne yewtqseqtn efitpypvfd nensiddgne
      241 gisnyqsqir velgleplak eygwtqsert nefrtpcpvf dnenfiddgn evssnhqsqe
      301 wsdlyklcrf inqqraagae iefpnlppld vaessystds vrkrsameve rlatgvetel
      361 aqqqakrsrl
//
LOCUS       XP_040943886             319 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 86 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943886
VERSION     XP_040943886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087952.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..319
                     /product="NAC domain-containing protein 86 isoform X3"
                     /calculated_mol_wt=36441
     Region          8..154
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..319
                     /gene="LOC107902856"
                     /coded_by="XM_041087952.1:54..1013"
                     /db_xref="GeneID:107902856"
ORIGIN      
        1 mnnlklkgyg fnpseqilig ylrdrttsgr dylvqdiidl shdicsydpw dlpgcdsitp
       61 hdserffiyp ktykyansks kvigtpteqv pnsdqrqpmi nratkngkwk vsgvrvnvks
      121 sdetkqvigi ktrlyfkhnn cpnktscvlh qfelvdidpc qdkyflgkvi mkefkptnis
      181 snnlndrisi pevrvelgpe plvetevtne yewtqseqtn efitpypvfd nensiddgne
      241 gisnyqsqew sdlyklcrfi nqqraagaei efpnlppldv aessystdsv rkrsamever
      301 latgvetela qqqakrsrl
//
LOCUS       XP_016684475             331 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684475
VERSION     XP_016684475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828986.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..331
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37789
     Region          <3..56
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..331
                     /gene="LOC107902872"
                     /coded_by="XM_016828986.2:415..1410"
                     /db_xref="GeneID:107902872"
ORIGIN      
        1 minratkngk wkvsgdqvdv kssddtkqvi giktrlyfrh nscpnktpwt lyqfelvdid
       61 pcqdkyflgk vimkkptnis snniddqisi pqvraelgle plvetevtne yewtqseqtn
      121 efitpypvfd nenfiavgne aishhqsqvr velgseplve tevtneygwt qsehtneyit
      181 pcpvfdnenf iddwneeisn hqaqvqvelg seplvemevt neygwtqseq tnefitpcpv
      241 fdindgnevi snhqsqinme lirslevpni giedqnqsyr niginrtvpd gsnqhnivav
      301 aenessmlps nlhdlliqmk wsdlynlcgr c
//
LOCUS       XP_016684485             270 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684485
VERSION     XP_016684485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828996.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..270
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30014
     CDS             1..270
                     /gene="LOC107902881"
                     /coded_by="XM_016828996.2:561..1373"
                     /db_xref="GeneID:107902881"
ORIGIN      
        1 mtefkptnis sdkdfnsrvf snfiddgnev isyhqsqvqv elgseslvet evtneygwtq
       61 seqtnefitp cpvlnsenfi ddgnevisnh qsqinmelir slevpnigie dqnqlyqnig
      121 idndrtvlld egsnqhniaa vaenessmlp snshdhlidf inqmewsdly nlcggkddgl
      181 flyelsdeqq elepqnqcgi nqqvaagaei ectnlppsdv aessystdsv pkrsamever
      241 satgvetela qqqakrsrlk sssclstvfd
//
LOCUS       XP_016684412             989 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP9 [Gossypium hirsutum].
ACCESSION   XP_016684412
VERSION     XP_016684412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..989
                     /product="protein NLP9"
                     /calculated_mol_wt=109833
     Region          599..647
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          890..970
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(891,893,899..901,917,965)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(891,893,900..902,917,921,965)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(893,921)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..989
                     /gene="LOC107902802"
                     /coded_by="XM_016828923.2:476..3445"
                     /db_xref="GeneID:107902802"
ORIGIN      
        1 meypfssrek gngywvpprt qmevgeqfgg ntrnllfedp fnyselmnld ayggwcsgsa
       61 atdqmfassg ffsypsmsha sfdstnsigq ssstyvesgy alggmdssyn cadrtvfrqt
      121 dehfsntvds kgvelgvrqh tdgnkqndts ylghllisrp igrsldekml ralslfkdls
      181 gegilaqvwv pikhgdqyml ttsdqpylld qmllgyrevs rtytfsaeqk pgsfpglpgr
      241 vflsrvpewt snvihyskae ylrithavnh evrgsiglpv fqppemscca vlelvttkek
      301 pnfhsemehv craleavnlr tlarprflpq clsknqraal aeitdvlrav chahslplal
      361 twipcnytee aeneyikmrv regnkswdgk cvlciedtac yvneremqdf vhacvehyle
      421 ggqgiagkal qsnhpffsad vktydvsdyp lvhharkfnl naavairlrs tytsdddyil
      481 elflpinmkg sleqqlllnn lsgtmqricr tlrtvsdaei vgerskfefq rvtvptfpsm
      541 amsqrsseta lsadsdmnsn hsipfnesns isdgkeadgp pekaisglqr pkrstteknv
      601 sfsvlqqyfs gslkdaaksi gvcpttlkri crqhgisrwp srkinkvnrs lkkiqtvlds
      661 vqgvdgglkf dpatgefvaa gtviqecnpe ktlmfsnnnl pvgiseafnh ekssaplasc
      721 ldgedsvvkw denecsfggn nneaarsvli psicqevkks ivplndcsed sksvagaasw
      781 icpenattgs yfrqgddkwg lnkgnpkvev anchfvslns sslaatdemd irkegddgid
      841 eynrqhtsss mtdtsnvsgs rlhgssssse ksmeaknsrm ktcvdssski tikatykent
      901 vrfkfepsag cfqvyeevak rfkvqngtfq lnylddeeew vmlvsdsdlh ecleimeyvg
      961 trsvkfqvrd vpftmgssss sncflsrns
//
LOCUS       XP_040943888             989 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP9 [Gossypium hirsutum].
ACCESSION   XP_040943888
VERSION     XP_040943888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087954.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..989
                     /product="protein NLP9"
                     /calculated_mol_wt=109833
     Region          599..647
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          890..970
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(891,893,899..901,917,965)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(891,893,900..902,917,921,965)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(893,921)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..989
                     /gene="LOC107902802"
                     /coded_by="XM_041087954.1:601..3570"
                     /db_xref="GeneID:107902802"
ORIGIN      
        1 meypfssrek gngywvpprt qmevgeqfgg ntrnllfedp fnyselmnld ayggwcsgsa
       61 atdqmfassg ffsypsmsha sfdstnsigq ssstyvesgy alggmdssyn cadrtvfrqt
      121 dehfsntvds kgvelgvrqh tdgnkqndts ylghllisrp igrsldekml ralslfkdls
      181 gegilaqvwv pikhgdqyml ttsdqpylld qmllgyrevs rtytfsaeqk pgsfpglpgr
      241 vflsrvpewt snvihyskae ylrithavnh evrgsiglpv fqppemscca vlelvttkek
      301 pnfhsemehv craleavnlr tlarprflpq clsknqraal aeitdvlrav chahslplal
      361 twipcnytee aeneyikmrv regnkswdgk cvlciedtac yvneremqdf vhacvehyle
      421 ggqgiagkal qsnhpffsad vktydvsdyp lvhharkfnl naavairlrs tytsdddyil
      481 elflpinmkg sleqqlllnn lsgtmqricr tlrtvsdaei vgerskfefq rvtvptfpsm
      541 amsqrsseta lsadsdmnsn hsipfnesns isdgkeadgp pekaisglqr pkrstteknv
      601 sfsvlqqyfs gslkdaaksi gvcpttlkri crqhgisrwp srkinkvnrs lkkiqtvlds
      661 vqgvdgglkf dpatgefvaa gtviqecnpe ktlmfsnnnl pvgiseafnh ekssaplasc
      721 ldgedsvvkw denecsfggn nneaarsvli psicqevkks ivplndcsed sksvagaasw
      781 icpenattgs yfrqgddkwg lnkgnpkvev anchfvslns sslaatdemd irkegddgid
      841 eynrqhtsss mtdtsnvsgs rlhgssssse ksmeaknsrm ktcvdssski tikatykent
      901 vrfkfepsag cfqvyeevak rfkvqngtfq lnylddeeew vmlvsdsdlh ecleimeyvg
      961 trsvkfqvrd vpftmgssss sncflsrns
//
LOCUS       XP_040943889             989 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP9 [Gossypium hirsutum].
ACCESSION   XP_040943889
VERSION     XP_040943889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087955.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..989
                     /product="protein NLP9"
                     /calculated_mol_wt=109833
     Region          599..647
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          890..970
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(891,893,899..901,917,965)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(891,893,900..902,917,921,965)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(893,921)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..989
                     /gene="LOC107902802"
                     /coded_by="XM_041087955.1:564..3533"
                     /db_xref="GeneID:107902802"
ORIGIN      
        1 meypfssrek gngywvpprt qmevgeqfgg ntrnllfedp fnyselmnld ayggwcsgsa
       61 atdqmfassg ffsypsmsha sfdstnsigq ssstyvesgy alggmdssyn cadrtvfrqt
      121 dehfsntvds kgvelgvrqh tdgnkqndts ylghllisrp igrsldekml ralslfkdls
      181 gegilaqvwv pikhgdqyml ttsdqpylld qmllgyrevs rtytfsaeqk pgsfpglpgr
      241 vflsrvpewt snvihyskae ylrithavnh evrgsiglpv fqppemscca vlelvttkek
      301 pnfhsemehv craleavnlr tlarprflpq clsknqraal aeitdvlrav chahslplal
      361 twipcnytee aeneyikmrv regnkswdgk cvlciedtac yvneremqdf vhacvehyle
      421 ggqgiagkal qsnhpffsad vktydvsdyp lvhharkfnl naavairlrs tytsdddyil
      481 elflpinmkg sleqqlllnn lsgtmqricr tlrtvsdaei vgerskfefq rvtvptfpsm
      541 amsqrsseta lsadsdmnsn hsipfnesns isdgkeadgp pekaisglqr pkrstteknv
      601 sfsvlqqyfs gslkdaaksi gvcpttlkri crqhgisrwp srkinkvnrs lkkiqtvlds
      661 vqgvdgglkf dpatgefvaa gtviqecnpe ktlmfsnnnl pvgiseafnh ekssaplasc
      721 ldgedsvvkw denecsfggn nneaarsvli psicqevkks ivplndcsed sksvagaasw
      781 icpenattgs yfrqgddkwg lnkgnpkvev anchfvslns sslaatdemd irkegddgid
      841 eynrqhtsss mtdtsnvsgs rlhgssssse ksmeaknsrm ktcvdssski tikatykent
      901 vrfkfepsag cfqvyeevak rfkvqngtfq lnylddeeew vmlvsdsdlh ecleimeyvg
      961 trsvkfqvrd vpftmgssss sncflsrns
//
LOCUS       XP_016684416             989 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NLP9 [Gossypium hirsutum].
ACCESSION   XP_016684416
VERSION     XP_016684416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..989
                     /product="protein NLP9"
                     /calculated_mol_wt=109833
     Region          599..647
                     /region_name="RWP-RK"
                     /note="RWP-RK domain; pfam02042"
                     /db_xref="CDD:460427"
     Region          890..970
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(891,893,899..901,917,965)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(891,893,900..902,917,921,965)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(893,921)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     Site            order(935,948)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99716"
     CDS             1..989
                     /gene="LOC107902802"
                     /coded_by="XM_016828927.2:512..3481"
                     /db_xref="GeneID:107902802"
ORIGIN      
        1 meypfssrek gngywvpprt qmevgeqfgg ntrnllfedp fnyselmnld ayggwcsgsa
       61 atdqmfassg ffsypsmsha sfdstnsigq ssstyvesgy alggmdssyn cadrtvfrqt
      121 dehfsntvds kgvelgvrqh tdgnkqndts ylghllisrp igrsldekml ralslfkdls
      181 gegilaqvwv pikhgdqyml ttsdqpylld qmllgyrevs rtytfsaeqk pgsfpglpgr
      241 vflsrvpewt snvihyskae ylrithavnh evrgsiglpv fqppemscca vlelvttkek
      301 pnfhsemehv craleavnlr tlarprflpq clsknqraal aeitdvlrav chahslplal
      361 twipcnytee aeneyikmrv regnkswdgk cvlciedtac yvneremqdf vhacvehyle
      421 ggqgiagkal qsnhpffsad vktydvsdyp lvhharkfnl naavairlrs tytsdddyil
      481 elflpinmkg sleqqlllnn lsgtmqricr tlrtvsdaei vgerskfefq rvtvptfpsm
      541 amsqrsseta lsadsdmnsn hsipfnesns isdgkeadgp pekaisglqr pkrstteknv
      601 sfsvlqqyfs gslkdaaksi gvcpttlkri crqhgisrwp srkinkvnrs lkkiqtvlds
      661 vqgvdgglkf dpatgefvaa gtviqecnpe ktlmfsnnnl pvgiseafnh ekssaplasc
      721 ldgedsvvkw denecsfggn nneaarsvli psicqevkks ivplndcsed sksvagaasw
      781 icpenattgs yfrqgddkwg lnkgnpkvev anchfvslns sslaatdemd irkegddgid
      841 eynrqhtsss mtdtsnvsgs rlhgssssse ksmeaknsrm ktcvdssski tikatykent
      901 vrfkfepsag cfqvyeevak rfkvqngtfq lnylddeeew vmlvsdsdlh ecleimeyvg
      961 trsvkfqvrd vpftmgssss sncflsrns
//
LOCUS       XP_016684432             641 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684432
VERSION     XP_016684432.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684432.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..641
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=72879
     CDS             1..641
                     /gene="LOC107902825"
                     /coded_by="XM_016828943.2:285..2210"
                     /db_xref="GeneID:107902825"
ORIGIN      
        1 mdkfhqtdci eilsqikhqe kllnlkrrwl mglsisrskk kqfkepeffk cktlpesflr
       61 eddmfyeiik ahvqdafgas nsrrgnhviq ddvqsfdask itgvlfsyld altndglhli
      121 vmilsggsgm ikktqcemkk aireslpsfl snknleheqk tsimqlykil ndpknfrnnt
      181 mkpmtptslf hhaaaiqmld rledlpfqtl iamdrklscv ktvpqlkthe rgqkrkrlvq
      241 kvgktarrml mdldeegklq gplakalava elslnltmgc qnssttsfrq ftpeivslqn
      301 divkaiwtlk tkarfpelka lqllldpnie iatrslrgai inalteflfe csdmdtipks
      361 flealsvinr dsrslpnkis rslphqsflk deieeeveci lsvsaemkqi fwdllpdhel
      421 deefadayge glegsdddsc iedsgcyend wkmvnkdles cmshsvksie rdeviqdvkm
      481 dpeysssnak ssedknrvkn kasfssprge lncqsierde veqkigvape nasnerfadn
      541 ktskcrnryl aiqeacdets lvahkligrl lekfakeqdm dldwsdslyl ggdsstqqhi
      601 qgqekkqklt eedmgdnlig tlkelmpfvt kslpghqnrk s
//
LOCUS       XP_016684441             585 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684441
VERSION     XP_016684441.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828952.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684441.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..585
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=66028
     CDS             1..585
                     /gene="LOC107902825"
                     /coded_by="XM_016828952.2:117..1874"
                     /db_xref="GeneID:107902825"
ORIGIN      
        1 mqhstimmfy eiikahvqda fgasnsrrgn hviqddvqsf daskitgvlf syldaltndg
       61 lhlivmilsg gsgmikktqc emkkairesl psflsnknle heqktsimql ykilndpknf
      121 rnntmkpmtp tslfhhaaai qmldrledlp fqtliamdrk lscvktvpql kthergqkrk
      181 rlvqkvgkta rrmlmdldee gklqgplaka lavaelslnl tmgcqnsstt sfrqftpeiv
      241 slqndivkai wtlktkarfp elkalqllld pnieiatrsl rgaiinalte flfecsdmdt
      301 ipksfleals vinrdsrslp nkisrslphq sflkdeieee vecilsvsae mkqifwdllp
      361 dheldeefad aygeglegsd ddsciedsgc yendwkmvnk dlescmshsv ksierdeviq
      421 dvkmdpeyss snakssedkn rvknkasfss prgelncqsi erdeveqkig vapenasner
      481 fadnktskcr nrylaiqeac detslvahkl igrllekfak eqdmdldwsd slylggdsst
      541 qqhiqgqekk qklteedmgd nligtlkelm pfvtkslpgh qnrks
//
LOCUS       XP_016684359            1593 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684359
VERSION     XP_016684359.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016828870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684359.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1593
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=184237
     Region          5..352
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          621..665
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          976..1067
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1118..1196
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1405..1585
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1593
                     /gene="LOC107902745"
                     /coded_by="XM_016828870.2:309..5090"
                     /db_xref="GeneID:107902745"
ORIGIN      
        1 mastalnlll scakaiedgd lkradaflhn ililaderpy syqskvvkyf adalvrrayg
       61 lhpassyfsf pvdpalyyhy nsyhingvik eviydallgn rrlhlidfsi qyygfegsvl
      121 rtlpnffgyp lpvrvsyilp pflkeyvefs rqmefltkda eevdvklede lkvygnslae
      181 vdeceidfkr rkddemvvvy ykfkldklvr dakamerelv rlkeinptiv imldfysnhs
      241 hsnfltcfkd sfqyslktld ywveldlyln gkyewecnie agegnniigr hptltewqhl
      301 fsmagfsrip lshrkdnlrv edesfleimg eeeeclilgy egcpmfflsa wkpkvedvhy
      361 nsnstnhkfg qgfnpnpppl qplqpfqegl ilnqlaalae ihdiskdlcc kyklslaltw
      421 aakvnnmnet isdpnkkhaf siqsnycyvk nrkyydfmll seclisgpii ekafesrdgy
      481 hfepsitkvv tkvedlrnfm lenfnidvav aiclqnrhts devyivefyw ppteseisns
      541 lalrifddlk htktmfvtvk vqgpeikfqe eaisstptss ntamhlkige eardihaiei
      601 nahieqivet krnkqrksws kvwmdfdkfe edgkqvakck hcpkvltgss ksgtthlnnh
      661 skvcpgkkkq hqesqlilpv dtnersstfn qershldlvk mvirhqypld lagqevfknf
      721 vkglqpmyef qsrdkllsdi hriyneerek lqlyfdqlac klnltvslwk nnhgktaycc
      781 liahfiddgw elkmkilglr klehvydtkv vggiirsfvs ewniskkvcs itvdnsflnd
      841 gmvhqirenc vseqgsfssa rwfisftlle dgfremdsil sklwksieyv tetthgklnf
      901 qeavnqvklq ggkswhelsf klesdsdild salrsreifc klekiddnfm lnlskeewek
      961 avtlqscfkc fddikgtqsl tanlyfpklc nmyeefgqlk ksnhpfvilm krkfdnywsl
     1021 cnvaftiaaa ldprlkfrss cnetydlesm mklirfrkvl mdvyseyane aknlsasssv
     1081 lddsnsltae ttkdcivsyf skfasasnvk evasqkseld cyleetllps dadilgwwrv
     1141 nsqrfptlak mardflaipv svsspcsnis amtinpayss ldpesmealv csenwlestk
     1201 enngeyhepm qnmdirkrkm eendtstvkv fkhrtrekas sngdiasdfn kndgslsfdn
     1261 wmepqcssse svgekaeime asvcngdsle ssigktnhgr niaaaieipn depsfnsnql
     1321 drfqsssses ddettlraqg swcredvrty lvssftnkek krlnrwkrse lsrkkigrdk
     1381 efqlmgenlt pllmvphcde tlieyyidds vvntyfkllk krsdkfpnvy ikhytfdsli
     1441 atcliegsks edevlawfkd eklrgvhklf lpmclsahwv lfcvdtkekk iswldpipss
     1501 rimsnsveke kifqwftlyl lpqfgyndae kwpfevrtdi pkqensidcg vfvmkygdcl
     1561 mhgdffpftq kdmihfrrri fldiyhgrlh gkr
//
LOCUS       XP_040943890            1313 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943890
VERSION     XP_040943890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087956.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1313
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=151202
     Region          5..352
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          621..665
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          976..1067
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1118..1196
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1313
                     /gene="LOC107902745"
                     /coded_by="XM_041087956.1:315..4256"
                     /db_xref="GeneID:107902745"
ORIGIN      
        1 mastalnlll scakaiedgd lkradaflhn ililaderpy syqskvvkyf adalvrrayg
       61 lhpassyfsf pvdpalyyhy nsyhingvik eviydallgn rrlhlidfsi qyygfegsvl
      121 rtlpnffgyp lpvrvsyilp pflkeyvefs rqmefltkda eevdvklede lkvygnslae
      181 vdeceidfkr rkddemvvvy ykfkldklvr dakamerelv rlkeinptiv imldfysnhs
      241 hsnfltcfkd sfqyslktld ywveldlyln gkyewecnie agegnniigr hptltewqhl
      301 fsmagfsrip lshrkdnlrv edesfleimg eeeeclilgy egcpmfflsa wkpkvedvhy
      361 nsnstnhkfg qgfnpnpppl qplqpfqegl ilnqlaalae ihdiskdlcc kyklslaltw
      421 aakvnnmnet isdpnkkhaf siqsnycyvk nrkyydfmll seclisgpii ekafesrdgy
      481 hfepsitkvv tkvedlrnfm lenfnidvav aiclqnrhts devyivefyw ppteseisns
      541 lalrifddlk htktmfvtvk vqgpeikfqe eaisstptss ntamhlkige eardihaiei
      601 nahieqivet krnkqrksws kvwmdfdkfe edgkqvakck hcpkvltgss ksgtthlnnh
      661 skvcpgkkkq hqesqlilpv dtnersstfn qershldlvk mvirhqypld lagqevfknf
      721 vkglqpmyef qsrdkllsdi hriyneerek lqlyfdqlac klnltvslwk nnhgktaycc
      781 liahfiddgw elkmkilglr klehvydtkv vggiirsfvs ewniskkvcs itvdnsflnd
      841 gmvhqirenc vseqgsfssa rwfisftlle dgfremdsil sklwksieyv tetthgklnf
      901 qeavnqvklq ggkswhelsf klesdsdild salrsreifc klekiddnfm lnlskeewek
      961 avtlqscfkc fddikgtqsl tanlyfpklc nmyeefgqlk ksnhpfvilm krkfdnywsl
     1021 cnvaftiaaa ldprlkfrss cnetydlesm mklirfrkvl mdvyseyane aknlsasssv
     1081 lddsnsltae ttkdcivsyf skfasasnvk evasqkseld cyleetllps dadilgwwrv
     1141 nsqrfptlak mardflaipv svsspcsnis amtinpayss ldpesmealv csenwlestk
     1201 enngeyhepm qnmdirkrkm eendtstvkv fkhrtrekas sngdiasdfn kndgslsfdn
     1261 wmepqcssse svgekaeime asvcngdsle ssigiinwid fkahlpslmt rqh
//
LOCUS       XP_040943892             859 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040943892
VERSION     XP_040943892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087958.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..859
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 1 isoform X1"
                     /calculated_mol_wt=98702
     Region          275..369
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          412..493
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          701..854
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..859
                     /gene="LOC107902751"
                     /coded_by="XM_041087958.1:247..2826"
                     /db_xref="GeneID:107902751"
ORIGIN      
        1 miikhrypld madqeffknf vkdmqpmfef eskdissyir siyreekekl qlyfnklask
       61 fnltvslwkn nsgktayccl iahfiddswe lkmktlglrt lehindtkav ggiiqslvse
      121 wnigskvcsi tvdnsfldns mvqqikencl snlvslssth wfinctlled gfremddllf
      181 nlkksieyvt etkhgrlkfq eavdqvklqd gkswddlslk lesdfgilds alrsreifck
      241 leqidgnfkl npsmeqwena aalqsclrcf ddikgtqslt vslylpqlcd iykkflqlek
      301 snpsfvtlmk rrfdhywrlc nsalavasvl dprlkfkvve fsyiliyghd skvqlntfre
      361 lltnvyneya netknqttsa svlddinwlg nnsiwdsfsk fvtaneassk selelyldep
      421 llpmdgeifd ilgwwcdksq nfpilakmar dflaipvsif tpcsnikati nnpaynilnp
      481 esmealvcse nwlespkgnd genheptqtt dkgkrklded tcvrkkskps ncekdiakds
      541 nsndepvgei sigklqtens skngcygets sgnkskasnk mmgtislqdi hqeksssefn
      601 hgrnvedvss gesssdndqs dqlqsssses dveitlkeqg swfeqdikay llseftkken
      661 elidkwqkne lkgkrigrdk cfkipgeila pllmvpqgde trkeyyiedl tqliegprte
      721 qevlawvkvd elrgvhkmfl pmslskhwvl fyadtkekki swldpiassr vrsynvekdi
      781 ilqwfttlll pklgyvdaee wpflvrndip eqknsvdcav fvmkygdclt hgdcfpfkqe
      841 dmvhsrrrif vdiyrgrih
//
LOCUS       XP_040943893             855 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943893
VERSION     XP_040943893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087959.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..855
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 1 isoform X2"
                     /calculated_mol_wt=98231
     Region          275..369
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          412..493
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          697..850
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..855
                     /gene="LOC107902751"
                     /coded_by="XM_041087959.1:247..2814"
                     /db_xref="GeneID:107902751"
ORIGIN      
        1 miikhrypld madqeffknf vkdmqpmfef eskdissyir siyreekekl qlyfnklask
       61 fnltvslwkn nsgktayccl iahfiddswe lkmktlglrt lehindtkav ggiiqslvse
      121 wnigskvcsi tvdnsfldns mvqqikencl snlvslssth wfinctlled gfremddllf
      181 nlkksieyvt etkhgrlkfq eavdqvklqd gkswddlslk lesdfgilds alrsreifck
      241 leqidgnfkl npsmeqwena aalqsclrcf ddikgtqslt vslylpqlcd iykkflqlek
      301 snpsfvtlmk rrfdhywrlc nsalavasvl dprlkfkvve fsyiliyghd skvqlntfre
      361 lltnvyneya netknqttsa svlddinwlg nnsiwdsfsk fvtaneassk selelyldep
      421 llpmdgeifd ilgwwcdksq nfpilakmar dflaipvsif tpcsnikati nnpaynilnp
      481 esmealvcse nwlespkgnd genheptqtt dkgkrklded tcvrkkskps ncekdiakds
      541 nsndepvgei sigknsskng cygetssgnk skasnkmmgt islqdihqek sssefnhgrn
      601 vedvssgess sdndqsdqlq ssssesdvei tlkeqgswfe qdikayllse ftkkenelid
      661 kwqknelkgk rigrdkcfki pgeilapllm vpqgdetrke yyiedltqli egprteqevl
      721 awvkvdelrg vhkmflpmsl skhwvlfyad tkekkiswld piassrvrsy nvekdiilqw
      781 fttlllpklg yvdaeewpfl vrndipeqkn svdcavfvmk ygdclthgdc fpfkqedmvh
      841 srrrifvdiy rgrih
//
LOCUS       XP_040943894             852 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 1 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040943894
VERSION     XP_040943894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087960.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..852
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 1 isoform X3"
                     /calculated_mol_wt=97972
     Region          275..369
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          412..493
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          694..847
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..852
                     /gene="LOC107902751"
                     /coded_by="XM_041087960.1:247..2805"
                     /db_xref="GeneID:107902751"
ORIGIN      
        1 miikhrypld madqeffknf vkdmqpmfef eskdissyir siyreekekl qlyfnklask
       61 fnltvslwkn nsgktayccl iahfiddswe lkmktlglrt lehindtkav ggiiqslvse
      121 wnigskvcsi tvdnsfldns mvqqikencl snlvslssth wfinctlled gfremddllf
      181 nlkksieyvt etkhgrlkfq eavdqvklqd gkswddlslk lesdfgilds alrsreifck
      241 leqidgnfkl npsmeqwena aalqsclrcf ddikgtqslt vslylpqlcd iykkflqlek
      301 snpsfvtlmk rrfdhywrlc nsalavasvl dprlkfkvve fsyiliyghd skvqlntfre
      361 lltnvyneya netknqttsa svlddinwlg nnsiwdsfsk fvtaneassk selelyldep
      421 llpmdgeifd ilgwwcdksq nfpilakmar dflaipvsif tpcsnikati nnpaynilnp
      481 esmealvcse nwlespkgnd genheptqtt dkgkrklded tcvrkkskps ncekdiakds
      541 nsndepvgei sigklqtens skngcygets sgnkskasnk mdihqeksss efnhgrnved
      601 vssgesssdn dqsdqlqsss sesdveitlk eqgswfeqdi kayllseftk kenelidkwq
      661 knelkgkrig rdkcfkipge ilapllmvpq gdetrkeyyi edltqliegp rteqevlawv
      721 kvdelrgvhk mflpmslskh wvlfyadtke kkiswldpia ssrvrsynve kdiilqwftt
      781 lllpklgyvd aeewpflvrn dipeqknsvd cavfvmkygd clthgdcfpf kqedmvhsrr
      841 rifvdiyrgr ih
//
LOCUS       XP_040943895             848 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 1 isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040943895
VERSION     XP_040943895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087961.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..848
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 1 isoform X4"
                     /calculated_mol_wt=97500
     Region          275..369
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          412..493
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          690..843
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..848
                     /gene="LOC107902751"
                     /coded_by="XM_041087961.1:247..2793"
                     /db_xref="GeneID:107902751"
ORIGIN      
        1 miikhrypld madqeffknf vkdmqpmfef eskdissyir siyreekekl qlyfnklask
       61 fnltvslwkn nsgktayccl iahfiddswe lkmktlglrt lehindtkav ggiiqslvse
      121 wnigskvcsi tvdnsfldns mvqqikencl snlvslssth wfinctlled gfremddllf
      181 nlkksieyvt etkhgrlkfq eavdqvklqd gkswddlslk lesdfgilds alrsreifck
      241 leqidgnfkl npsmeqwena aalqsclrcf ddikgtqslt vslylpqlcd iykkflqlek
      301 snpsfvtlmk rrfdhywrlc nsalavasvl dprlkfkvve fsyiliyghd skvqlntfre
      361 lltnvyneya netknqttsa svlddinwlg nnsiwdsfsk fvtaneassk selelyldep
      421 llpmdgeifd ilgwwcdksq nfpilakmar dflaipvsif tpcsnikati nnpaynilnp
      481 esmealvcse nwlespkgnd genheptqtt dkgkrklded tcvrkkskps ncekdiakds
      541 nsndepvgei sigknsskng cygetssgnk skasnkmdih qeksssefnh grnvedvssg
      601 esssdndqsd qlqssssesd veitlkeqgs wfeqdikayl lseftkkene lidkwqknel
      661 kgkrigrdkc fkipgeilap llmvpqgdet rkeyyiedlt qliegprteq evlawvkvde
      721 lrgvhkmflp mslskhwvlf yadtkekkis wldpiassrv rsynvekdii lqwfttlllp
      781 klgyvdaeew pflvrndipe qknsvdcavf vmkygdclth gdcfpfkqed mvhsrrrifv
      841 diyrgrih
//
LOCUS       XP_040943896             250 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943896
VERSION     XP_040943896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087962.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..250
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28449
     Region          <1..46
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..250
                     /gene="LOC107906102"
                     /coded_by="XM_041087962.1:1141..1893"
                     /db_xref="GeneID:107906102"
ORIGIN      
        1 mardflaipv siftscsnik atinnrayni lnpesmealv csenwlespk gndgenhept
       61 qttdkgkrkl dedtcvrkks kpsncekais tednakdfnn nefnhgrnfk nvneissdds
      121 ssdfdqsdqv qssssesdde ttlkeqgqwc eqdvrvylvs nftnkdyerl dklerkklnr
      181 kslgrgkeln ltgdklepll mvprstetqk stilmklslm lfsnclrrdl vnfqkhtsit
      241 ihltlkqris
//
LOCUS       XP_040943897             212 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein DAYSLEEPER-like
            [Gossypium hirsutum].
ACCESSION   XP_040943897
VERSION     XP_040943897.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087963.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..212
                     /product="zinc finger BED domain-containing protein
                     DAYSLEEPER-like"
                     /calculated_mol_wt=23985
     Region          <1..61
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          107..188
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..212
                     /gene="LOC107917504"
                     /coded_by="XM_041087963.1:162..800"
                     /db_xref="GeneID:107917504"
ORIGIN      
        1 mkrrfdhywr lcnsalavas vldprlkfkv vefsyiliyg rdskvqlntf revltnvyne
       61 yanetknqtt sasvlddinw lgnnsiwdsf gkfvtasnfn aaslkselel yldepllpmd
      121 gatfdilgww cdksqkfpil akmardflai pvsiftpcsn fkatinnpay nilnpesmea
      181 lvcsenwlet pkgndgenhe ptqttvgivh kl
//
LOCUS       XP_040943899             143 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial-like [Gossypium hirsutum].
ACCESSION   XP_040943899
VERSION     XP_040943899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087965.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..143
                     /product="pentatricopeptide repeat-containing protein
                     At3g26782, mitochondrial-like"
                     /calculated_mol_wt=15820
     Region          <1..135
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     CDS             1..143
                     /gene="LOC121214406"
                     /coded_by="XM_041087965.1:1..432"
                     /db_xref="GeneID:121214406"
ORIGIN      
        1 maniytsagk wkeaaktrsm mrnkgsvkep gwsqikings vhvfmagdrs hhrsasiyek
       61 lnelntklke agyvaetdmv vhdlenedke esmkvhserl avawgligte pgttltiikn
      121 lqtcgdchsf lkftsrlqag ill
//
LOCUS       XP_016728570            1561 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728570
VERSION     XP_016728570.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873081.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728570.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1561
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=180658
     Region          9..357
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          630..674
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          985..1079
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1125..1206
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1372..1553
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1561
                     /gene="LOC107939715"
                     /coded_by="XM_016873081.2:146..4831"
                     /db_xref="GeneID:107939715"
ORIGIN      
        1 massfsetal nlllscaeai edgdlksada flhdililad qrpycsrdes rvvkyfadal
       61 vrrayglhpa sssltfhvhp apyyhynsyh ingviekvig dafmgnrrlh lidfsipyyr
      121 fqnsvlrtlp sffgdplpvr vsyilppflk ayvefsrqme fltkdakevn vkledelkvv
      181 ygnslaevne cemdfkrrrd demvvvyykf kleklvrdae aterelvrlk einpmiviml
      241 dfysnhthsn fltcfkdsvq yslktywaqw dnylhweygw ecnieagegn niirrhpslt
      301 ewqhlfsmag fsriplnhrk dnlsvedesw leimgeeeec lilgnkgcpm fflsawkpkv
      361 edghfnfist nhkfgqgfnl nplprqplqp fleglilnrs aalaeihdis kdlcckykls
      421 faitwasevn ninetisdpn kkhtfsiqsi scceidrdsy yflidfedei svpliiekaf
      481 esrdgyhfep slakvedsry lvledyhidv avaiclqnrh tsdevyivef ywpptesems
      541 kslalrifdd lkhkkttfvt vkvqvpeikf qegissiats sntamplkia eeardihane
      601 inahieqiif nddsqiaetk rnkqrkswsk vwvdfdkfee hgkqvakckh clkvftgssk
      661 sgtthlnnhs kvcpgkkkqn qesqlilpvd tnersstfdq ershldlmkm virhqypldl
      721 agqeafknfv kglqpmyefq srdkllsdih riyneereki qlyfdqlack lnltvslwkn
      781 nhgktayccl iahfiddgwe lkmktlglrt lehindtkav ggiiqslvse wnigskvcsi
      841 tvdnsfldds mvqqikencl snlvslssth wfinctlled gfremddllf nlkksieyvt
      901 etkhgrlkfq eavdqvklqd gkswddlslk lesdfgilds alrsreifrk leqidgnfkl
      961 npsteewena aalqsclrcf ddikgtqslt vslyfpklch iymkflqlek inpsfvtlmk
     1021 rrfdhywrlc nsalavasvl dprlkfkive fsyiliyghd skvplntfre vltnvyneya
     1081 netknqtisa svlddtnwlg nnsiwdsfsk fvtasnfnea tskselelyl depllpqdga
     1141 iidilgwwcd ksqnfpilak mardflaipv siftscsnik atinnrayni lnpesmealv
     1201 csenwlespk gndgenhept qttdkgkrkl dedtcvrkks kpsncekais tednakdfnn
     1261 nefnhgrnfk nvneissdds ssdfdqsdqv qssssesdde ttlkeqgqwc eqdvrvylvs
     1321 nftnkdyerl dklerkklnr kslgrgkeln ltgdklepll mvprstetqk kyhinevvin
     1381 affkllkers rkfskayinh ysfdsqaanl likgsrseqe vlarykpdhl sgvhklflpl
     1441 clsdhwvlfy vdinakkfsc ldpyqssgil slnsknvdki lqwfknfllp efgykdanew
     1501 pyvartdipq qknsvdcgvf vmkygdclty gdffpftqkd mihfrrrifl dlyrgrlhir
     1561 k
//
LOCUS       XP_040943900            1553 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943900
VERSION     XP_040943900.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087966.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1553
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=179725
     Region          9..357
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          622..666
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          977..1071
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1117..1198
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1364..1545
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1553
                     /gene="LOC107939715"
                     /coded_by="XM_041087966.1:146..4807"
                     /db_xref="GeneID:107939715"
ORIGIN      
        1 massfsetal nlllscaeai edgdlksada flhdililad qrpycsrdes rvvkyfadal
       61 vrrayglhpa sssltfhvhp apyyhynsyh ingviekvig dafmgnrrlh lidfsipyyr
      121 fqnsvlrtlp sffgdplpvr vsyilppflk ayvefsrqme fltkdakevn vkledelkvv
      181 ygnslaevne cemdfkrrrd demvvvyykf kleklvrdae aterelvrlk einpmiviml
      241 dfysnhthsn fltcfkdsvq yslktywaqw dnylhweygw ecnieagegn niirrhpslt
      301 ewqhlfsmag fsriplnhrk dnlsvedesw leimgeeeec lilgnkgcpm fflsawkpkv
      361 edghfnfist nhkfgqgfnl nplprqplqp fleglilnrs aalaeihdis kdlcckykls
      421 faitwasevn ninetisdpn kkhtfsiqsi scceidrdsy yflidfedei svpliiekaf
      481 esrdgyhfep slakvedsry lvledyhidv avaiclqnrh tsdevyivef ywpptesems
      541 kslalrifdd lkhkkttfvt vkvqvpeikf qegissiats sntamplkia eeardihane
      601 inahieqiae tkrnkqrksw skvwvdfdkf eehgkqvakc khclkvftgs sksgtthlnn
      661 hskvcpgkkk qnqesqlilp vdtnersstf dqershldlm kmvirhqypl dlagqeafkn
      721 fvkglqpmye fqsrdkllsd ihriyneere kiqlyfdqla cklnltvslw knnhgktayc
      781 cliahfiddg welkmktlgl rtlehindtk avggiiqslv sewnigskvc sitvdnsfld
      841 dsmvqqiken clsnlvslss thwfinctll edgfremddl lfnlkksiey vtetkhgrlk
      901 fqeavdqvkl qdgkswddls lklesdfgil dsalrsreif rkleqidgnf klnpsteewe
      961 naaalqsclr cfddikgtqs ltvslyfpkl chiymkflql ekinpsfvtl mkrrfdhywr
     1021 lcnsalavas vldprlkfki vefsyiliyg hdskvplntf revltnvyne yanetknqti
     1081 sasvlddtnw lgnnsiwdsf skfvtasnfn eatskselel yldepllpqd gaiidilgww
     1141 cdksqnfpil akmardflai pvsiftscsn ikatinnray nilnpesmea lvcsenwles
     1201 pkgndgenhe ptqttdkgkr kldedtcvrk kskpsnceka istednakdf nnnefnhgrn
     1261 fknvneissd dsssdfdqsd qvqssssesd dettlkeqgq wceqdvrvyl vsnftnkdye
     1321 rldklerkkl nrkslgrgke lnltgdklep llmvprstet qkkyhinevv inaffkllke
     1381 rsrkfskayi nhysfdsqaa nllikgsrse qevlarykpd hlsgvhklfl plclsdhwvl
     1441 fyvdinakkf scldpyqssg ilslnsknvd kilqwfknfl lpefgykdan ewpyvartdi
     1501 pqqknsvdcg vfvmkygdcl tygdffpftq kdmihfrrri fldlyrgrlh irk
//
LOCUS       XP_040943901            1513 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943901
VERSION     XP_040943901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087967.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1513
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=174827
     Region          9..357
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          630..674
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          985..1079
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1125..1206
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1372..>1512
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1513
                     /gene="LOC107939715"
                     /coded_by="XM_041087967.1:146..4687"
                     /db_xref="GeneID:107939715"
ORIGIN      
        1 massfsetal nlllscaeai edgdlksada flhdililad qrpycsrdes rvvkyfadal
       61 vrrayglhpa sssltfhvhp apyyhynsyh ingviekvig dafmgnrrlh lidfsipyyr
      121 fqnsvlrtlp sffgdplpvr vsyilppflk ayvefsrqme fltkdakevn vkledelkvv
      181 ygnslaevne cemdfkrrrd demvvvyykf kleklvrdae aterelvrlk einpmiviml
      241 dfysnhthsn fltcfkdsvq yslktywaqw dnylhweygw ecnieagegn niirrhpslt
      301 ewqhlfsmag fsriplnhrk dnlsvedesw leimgeeeec lilgnkgcpm fflsawkpkv
      361 edghfnfist nhkfgqgfnl nplprqplqp fleglilnrs aalaeihdis kdlcckykls
      421 faitwasevn ninetisdpn kkhtfsiqsi scceidrdsy yflidfedei svpliiekaf
      481 esrdgyhfep slakvedsry lvledyhidv avaiclqnrh tsdevyivef ywpptesems
      541 kslalrifdd lkhkkttfvt vkvqvpeikf qegissiats sntamplkia eeardihane
      601 inahieqiif nddsqiaetk rnkqrkswsk vwvdfdkfee hgkqvakckh clkvftgssk
      661 sgtthlnnhs kvcpgkkkqn qesqlilpvd tnersstfdq ershldlmkm virhqypldl
      721 agqeafknfv kglqpmyefq srdkllsdih riyneereki qlyfdqlack lnltvslwkn
      781 nhgktayccl iahfiddgwe lkmktlglrt lehindtkav ggiiqslvse wnigskvcsi
      841 tvdnsfldds mvqqikencl snlvslssth wfinctlled gfremddllf nlkksieyvt
      901 etkhgrlkfq eavdqvklqd gkswddlslk lesdfgilds alrsreifrk leqidgnfkl
      961 npsteewena aalqsclrcf ddikgtqslt vslyfpklch iymkflqlek inpsfvtlmk
     1021 rrfdhywrlc nsalavasvl dprlkfkive fsyiliyghd skvplntfre vltnvyneya
     1081 netknqtisa svlddtnwlg nnsiwdsfsk fvtasnfnea tskselelyl depllpqdga
     1141 iidilgwwcd ksqnfpilak mardflaipv siftscsnik atinnrayni lnpesmealv
     1201 csenwlespk gndgenhept qttdkgkrkl dedtcvrkks kpsncekais tednakdfnn
     1261 nefnhgrnfk nvneissdds ssdfdqsdqv qssssesdde ttlkeqgqwc eqdvrvylvs
     1321 nftnkdyerl dklerkklnr kslgrgkeln ltgdklepll mvprstetqk kyhinevvin
     1381 affkllkers rkfskayinh ysfdsqaanl likgsrseqe vlarykpdhl sgvhklflpl
     1441 clsdhwvlfy vdinakkfsc ldpyqssgil slnsknvdki lqwfknfllp efgykdanew
     1501 pyvartdipq qkk
//
LOCUS       XP_040943902            1297 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943902
VERSION     XP_040943902.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087968.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1297
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=149496
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          689..733
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1043..1137
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1188..1269
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1297
                     /gene="LOC107939729"
                     /coded_by="XM_041087968.1:218..4111"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngkfgqg fnpypsplrp lrpfpegltl
      421 srvaavaeiy dilnhlyceh kfslaltwvs kvdnmnetms dpnkkytfsi qsnscyskdw
      481 nsykfmrsce ykieqtiiek aleskdgyhf epsltksdid dymylqrakh cnvdvvvaic
      541 lqnrytsndi yvvefywptt eseisksftp rifndlkhme kkfvtvkvqg teqaisnipt
      601 ssytarplki aeetedvdav elngvnvqrg vvpnfpspit iqssskvvaa psntlegphn
      661 qifpngdpei vkankqepsk atqrelrskv wdhfdrfeed ekqvakckhc pkvltgssks
      721 gtthlnnhsk vcpgkkkqnq esqlilpvdt negslrfdkk rshmdlakmm iklqcpldma
      781 eqetfknfvk glqpmfefqs kdilsyihri ydeekeklql yfdklaskfn ltvsllknns
      841 gktiycclis hfiddgwelk rkilalktle hindtkalge iirslvlewn isnkvcsitv
      901 dnsflndsmv dqikeiclsd qgsvssdhwf isftlledgf remdgilfkl rksieyvtet
      961 rhgklkfqea vdqvklqggk lwddlsfrlk sdfdildsal rsreifckle qiddnfklnp
     1021 tmeewenava lqsclkcfdd vkgtqclpvs lylpklcdty kkflqlekss hsfvtlmkrk
     1081 fdrywslcnl alavasvldp rlkfkivels yrviyghdsk mrlnmfhkvl rdvyyeyase
     1141 aknltssasv lddfncstiv lgndsildsl skfasasnfn eeaswklele lyldepllpm
     1201 dgaffdilgw wcdksqrfpi lakmaqdfla ipvsistscs nisaminnpa ygslnpesme
     1261 alvcsenwle tpkendgdkg lyeivitrhp yffpige
//
LOCUS       XP_016728584            1297 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728584
VERSION     XP_016728584.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873095.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728584.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1297
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=149496
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          689..733
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1043..1137
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1188..1269
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1297
                     /gene="LOC107939729"
                     /coded_by="XM_016873095.2:218..4111"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngkfgqg fnpypsplrp lrpfpegltl
      421 srvaavaeiy dilnhlyceh kfslaltwvs kvdnmnetms dpnkkytfsi qsnscyskdw
      481 nsykfmrsce ykieqtiiek aleskdgyhf epsltksdid dymylqrakh cnvdvvvaic
      541 lqnrytsndi yvvefywptt eseisksftp rifndlkhme kkfvtvkvqg teqaisnipt
      601 ssytarplki aeetedvdav elngvnvqrg vvpnfpspit iqssskvvaa psntlegphn
      661 qifpngdpei vkankqepsk atqrelrskv wdhfdrfeed ekqvakckhc pkvltgssks
      721 gtthlnnhsk vcpgkkkqnq esqlilpvdt negslrfdkk rshmdlakmm iklqcpldma
      781 eqetfknfvk glqpmfefqs kdilsyihri ydeekeklql yfdklaskfn ltvsllknns
      841 gktiycclis hfiddgwelk rkilalktle hindtkalge iirslvlewn isnkvcsitv
      901 dnsflndsmv dqikeiclsd qgsvssdhwf isftlledgf remdgilfkl rksieyvtet
      961 rhgklkfqea vdqvklqggk lwddlsfrlk sdfdildsal rsreifckle qiddnfklnp
     1021 tmeewenava lqsclkcfdd vkgtqclpvs lylpklcdty kkflqlekss hsfvtlmkrk
     1081 fdrywslcnl alavasvldp rlkfkivels yrviyghdsk mrlnmfhkvl rdvyyeyase
     1141 aknltssasv lddfncstiv lgndsildsl skfasasnfn eeaswklele lyldepllpm
     1201 dgaffdilgw wcdksqrfpi lakmaqdfla ipvsistscs nisaminnpa ygslnpesme
     1261 alvcsenwle tpkendgdkg lyeivitrhp yffpige
//
LOCUS       XP_016728585            1297 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728585
VERSION     XP_016728585.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873096.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728585.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1297
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=149496
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          689..733
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1043..1137
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1188..1269
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1297
                     /gene="LOC107939729"
                     /coded_by="XM_016873096.2:218..4111"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngkfgqg fnpypsplrp lrpfpegltl
      421 srvaavaeiy dilnhlyceh kfslaltwvs kvdnmnetms dpnkkytfsi qsnscyskdw
      481 nsykfmrsce ykieqtiiek aleskdgyhf epsltksdid dymylqrakh cnvdvvvaic
      541 lqnrytsndi yvvefywptt eseisksftp rifndlkhme kkfvtvkvqg teqaisnipt
      601 ssytarplki aeetedvdav elngvnvqrg vvpnfpspit iqssskvvaa psntlegphn
      661 qifpngdpei vkankqepsk atqrelrskv wdhfdrfeed ekqvakckhc pkvltgssks
      721 gtthlnnhsk vcpgkkkqnq esqlilpvdt negslrfdkk rshmdlakmm iklqcpldma
      781 eqetfknfvk glqpmfefqs kdilsyihri ydeekeklql yfdklaskfn ltvsllknns
      841 gktiycclis hfiddgwelk rkilalktle hindtkalge iirslvlewn isnkvcsitv
      901 dnsflndsmv dqikeiclsd qgsvssdhwf isftlledgf remdgilfkl rksieyvtet
      961 rhgklkfqea vdqvklqggk lwddlsfrlk sdfdildsal rsreifckle qiddnfklnp
     1021 tmeewenava lqsclkcfdd vkgtqclpvs lylpklcdty kkflqlekss hsfvtlmkrk
     1081 fdrywslcnl alavasvldp rlkfkivels yrviyghdsk mrlnmfhkvl rdvyyeyase
     1141 aknltssasv lddfncstiv lgndsildsl skfasasnfn eeaswklele lyldepllpm
     1201 dgaffdilgw wcdksqrfpi lakmaqdfla ipvsistscs nisaminnpa ygslnpesme
     1261 alvcsenwle tpkendgdkg lyeivitrhp yffpige
//
LOCUS       XP_040943904            1297 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943904
VERSION     XP_040943904.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087970.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1297
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=149496
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          689..733
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1043..1137
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1188..1269
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1297
                     /gene="LOC107939729"
                     /coded_by="XM_041087970.1:218..4111"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngkfgqg fnpypsplrp lrpfpegltl
      421 srvaavaeiy dilnhlyceh kfslaltwvs kvdnmnetms dpnkkytfsi qsnscyskdw
      481 nsykfmrsce ykieqtiiek aleskdgyhf epsltksdid dymylqrakh cnvdvvvaic
      541 lqnrytsndi yvvefywptt eseisksftp rifndlkhme kkfvtvkvqg teqaisnipt
      601 ssytarplki aeetedvdav elngvnvqrg vvpnfpspit iqssskvvaa psntlegphn
      661 qifpngdpei vkankqepsk atqrelrskv wdhfdrfeed ekqvakckhc pkvltgssks
      721 gtthlnnhsk vcpgkkkqnq esqlilpvdt negslrfdkk rshmdlakmm iklqcpldma
      781 eqetfknfvk glqpmfefqs kdilsyihri ydeekeklql yfdklaskfn ltvsllknns
      841 gktiycclis hfiddgwelk rkilalktle hindtkalge iirslvlewn isnkvcsitv
      901 dnsflndsmv dqikeiclsd qgsvssdhwf isftlledgf remdgilfkl rksieyvtet
      961 rhgklkfqea vdqvklqggk lwddlsfrlk sdfdildsal rsreifckle qiddnfklnp
     1021 tmeewenava lqsclkcfdd vkgtqclpvs lylpklcdty kkflqlekss hsfvtlmkrk
     1081 fdrywslcnl alavasvldp rlkfkivels yrviyghdsk mrlnmfhkvl rdvyyeyase
     1141 aknltssasv lddfncstiv lgndsildsl skfasasnfn eeaswklele lyldepllpm
     1201 dgaffdilgw wcdksqrfpi lakmaqdfla ipvsistscs nisaminnpa ygslnpesme
     1261 alvcsenwle tpkendgdkg lyeivitrhp yffpige
//
LOCUS       XP_040943905            1292 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943905
VERSION     XP_040943905.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087971.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1292
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=148978
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          684..728
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1038..1132
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1183..1264
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1292
                     /gene="LOC107939729"
                     /coded_by="XM_041087971.1:218..4096"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngfnpyp splrplrpfp egltlsrvaa
      421 vaeiydilnh lycehkfsla ltwvskvdnm netmsdpnkk ytfsiqsnsc yskdwnsykf
      481 mrsceykieq tiiekalesk dgyhfepslt ksdiddymyl qrakhcnvdv vvaiclqnry
      541 tsndiyvvef ywptteseis ksftprifnd lkhmekkfvt vkvqgteqai sniptssyta
      601 rplkiaeete dvdavelngv nvqrgvvpnf pspitiqsss kvvaapsntl egphnqifpn
      661 gdpeivkank qepskatqre lrskvwdhfd rfeedekqva kckhcpkvlt gssksgtthl
      721 nnhskvcpgk kkqnqesqli lpvdtnegsl rfdkkrshmd lakmmiklqc pldmaeqetf
      781 knfvkglqpm fefqskdils yihriydeek eklqlyfdkl askfnltvsl lknnsgktiy
      841 cclishfidd gwelkrkila lktlehindt kalgeiirsl vlewnisnkv csitvdnsfl
      901 ndsmvdqike iclsdqgsvs sdhwfisftl ledgfremdg ilfklrksie yvtetrhgkl
      961 kfqeavdqvk lqggklwddl sfrlksdfdi ldsalrsrei fckleqiddn fklnptmeew
     1021 enavalqscl kcfddvkgtq clpvslylpk lcdtykkflq leksshsfvt lmkrkfdryw
     1081 slcnlalava svldprlkfk ivelsyrviy ghdskmrlnm fhkvlrdvyy eyaseaknlt
     1141 ssasvlddfn cstivlgnds ildslskfas asnfneeasw klelelylde pllpmdgaff
     1201 dilgwwcdks qrfpilakma qdflaipvsi stscsnisam innpaygsln pesmealvcs
     1261 enwletpken dgdkglyeiv itrhpyffpi ge
//
LOCUS       XP_040943906            1281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943906
VERSION     XP_040943906.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087972.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1281
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=147719
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          689..733
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1043..1137
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1188..1269
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1281
                     /gene="LOC107939729"
                     /coded_by="XM_041087972.1:218..4063"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngkfgqg fnpypsplrp lrpfpegltl
      421 srvaavaeiy dilnhlyceh kfslaltwvs kvdnmnetms dpnkkytfsi qsnscyskdw
      481 nsykfmrsce ykieqtiiek aleskdgyhf epsltksdid dymylqrakh cnvdvvvaic
      541 lqnrytsndi yvvefywptt eseisksftp rifndlkhme kkfvtvkvqg teqaisnipt
      601 ssytarplki aeetedvdav elngvnvqrg vvpnfpspit iqssskvvaa psntlegphn
      661 qifpngdpei vkankqepsk atqrelrskv wdhfdrfeed ekqvakckhc pkvltgssks
      721 gtthlnnhsk vcpgkkkqnq esqlilpvdt negslrfdkk rshmdlakmm iklqcpldma
      781 eqetfknfvk glqpmfefqs kdilsyihri ydeekeklql yfdklaskfn ltvsllknns
      841 gktiycclis hfiddgwelk rkilalktle hindtkalge iirslvlewn isnkvcsitv
      901 dnsflndsmv dqikeiclsd qgsvssdhwf isftlledgf remdgilfkl rksieyvtet
      961 rhgklkfqea vdqvklqggk lwddlsfrlk sdfdildsal rsreifckle qiddnfklnp
     1021 tmeewenava lqsclkcfdd vkgtqclpvs lylpklcdty kkflqlekss hsfvtlmkrk
     1081 fdrywslcnl alavasvldp rlkfkivels yrviyghdsk mrlnmfhkvl rdvyyeyase
     1141 aknltssasv lddfncstiv lgndsildsl skfasasnfn eeaswklele lyldepllpm
     1201 dgaffdilgw wcdksqrfpi lakmaqdfla ipvsistscs nisaminnpa ygslnpesme
     1261 alvcsenwle tpkemhyhfi g
//
LOCUS       XP_016728589            1275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728589
VERSION     XP_016728589.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728589.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1275
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=146989
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          689..733
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1043..1137
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1188..1269
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1275
                     /gene="LOC107939729"
                     /coded_by="XM_016873100.2:218..4045"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngkfgqg fnpypsplrp lrpfpegltl
      421 srvaavaeiy dilnhlyceh kfslaltwvs kvdnmnetms dpnkkytfsi qsnscyskdw
      481 nsykfmrsce ykieqtiiek aleskdgyhf epsltksdid dymylqrakh cnvdvvvaic
      541 lqnrytsndi yvvefywptt eseisksftp rifndlkhme kkfvtvkvqg teqaisnipt
      601 ssytarplki aeetedvdav elngvnvqrg vvpnfpspit iqssskvvaa psntlegphn
      661 qifpngdpei vkankqepsk atqrelrskv wdhfdrfeed ekqvakckhc pkvltgssks
      721 gtthlnnhsk vcpgkkkqnq esqlilpvdt negslrfdkk rshmdlakmm iklqcpldma
      781 eqetfknfvk glqpmfefqs kdilsyihri ydeekeklql yfdklaskfn ltvsllknns
      841 gktiycclis hfiddgwelk rkilalktle hindtkalge iirslvlewn isnkvcsitv
      901 dnsflndsmv dqikeiclsd qgsvssdhwf isftlledgf remdgilfkl rksieyvtet
      961 rhgklkfqea vdqvklqggk lwddlsfrlk sdfdildsal rsreifckle qiddnfklnp
     1021 tmeewenava lqsclkcfdd vkgtqclpvs lylpklcdty kkflqlekss hsfvtlmkrk
     1081 fdrywslcnl alavasvldp rlkfkivels yrviyghdsk mrlnmfhkvl rdvyyeyase
     1141 aknltssasv lddfncstiv lgndsildsl skfasasnfn eeaswklele lyldepllpm
     1201 dgaffdilgw wcdksqrfpi lakmaqdfla ipvsistscs nisaminnpa ygslnpesme
     1261 alvcsenwle tpker
//
LOCUS       XP_040943907            1270 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943907
VERSION     XP_040943907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087973.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1270
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=146471
     Region          13..380
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          684..728
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1038..1132
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1183..1264
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1270
                     /gene="LOC107939729"
                     /coded_by="XM_041087973.1:218..4030"
                     /db_xref="GeneID:107939729"
ORIGIN      
        1 masslfdidt dtalrlllsc aeaiedgdlk sadaylqnil iladerpyly ksrvvkyfad
       61 alvrrayglh passyftfpv dpspyyhcgs ylingvienv ihdalmekna lmgnrklhli
      121 dfsipyssfq nsvvrtlptf sgdplpvrvs yilppflkky vkflrqmefl trdakevnvk
      181 ledelklvyg nslaevdece idlkrrrdde mvvvyykfkl dklvrdakam erelvrlkei
      241 nptivimldf ysnhthsnfl tcfkdsfqys lktldcweel dlyfdeeyaw echieawegn
      301 nvirrhptlt ewqhlfsmag fsriplnhre gidlivkdvn plndffsmsn qswleimgke
      361 eeclilgyke cpmfflsawk pkveeehlnf nssngfnpyp splrplrpfp egltlsrvaa
      421 vaeiydilnh lycehkfsla ltwvskvdnm netmsdpnkk ytfsiqsnsc yskdwnsykf
      481 mrsceykieq tiiekalesk dgyhfepslt ksdiddymyl qrakhcnvdv vvaiclqnry
      541 tsndiyvvef ywptteseis ksftprifnd lkhmekkfvt vkvqgteqai sniptssyta
      601 rplkiaeete dvdavelngv nvqrgvvpnf pspitiqsss kvvaapsntl egphnqifpn
      661 gdpeivkank qepskatqre lrskvwdhfd rfeedekqva kckhcpkvlt gssksgtthl
      721 nnhskvcpgk kkqnqesqli lpvdtnegsl rfdkkrshmd lakmmiklqc pldmaeqetf
      781 knfvkglqpm fefqskdils yihriydeek eklqlyfdkl askfnltvsl lknnsgktiy
      841 cclishfidd gwelkrkila lktlehindt kalgeiirsl vlewnisnkv csitvdnsfl
      901 ndsmvdqike iclsdqgsvs sdhwfisftl ledgfremdg ilfklrksie yvtetrhgkl
      961 kfqeavdqvk lqggklwddl sfrlksdfdi ldsalrsrei fckleqiddn fklnptmeew
     1021 enavalqscl kcfddvkgtq clpvslylpk lcdtykkflq leksshsfvt lmkrkfdryw
     1081 slcnlalava svldprlkfk ivelsyrviy ghdskmrlnm fhkvlrdvyy eyaseaknlt
     1141 ssasvlddfn cstivlgnds ildslskfas asnfneeasw klelelylde pllpmdgaff
     1201 dilgwwcdks qrfpilakma qdflaipvsi stscsnisam innpaygsln pesmealvcs
     1261 enwletpker
//
LOCUS       XP_016728567            1593 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016728567
VERSION     XP_016728567.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728567.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1593
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=183925
     Region          9..356
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          622..666
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          977..1068
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1119..1197
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1406..1586
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1593
                     /gene="LOC107939712"
                     /coded_by="XM_016873078.2:148..4929"
                     /db_xref="GeneID:107939712"
ORIGIN      
        1 massfsdtal nlllscakai edgdlkrada clhyililad krpysyqtiv vkyfadalvr
       61 rayglhpass yfafpvdpap yyhynscrin gvikkvigya lmgnrrlhli dfsipyyyrf
      121 qnsvlrtlpn ffgyplsvrv syilppflke yvdlsrqmef ltkdavnvkl edelkvvygn
      181 slaevdecei dfkrrrddem vvvyykfkle klvrdakame relvrlkein ptivimldfy
      241 snhthsnflt cfkdslqysl ktvdywaelh hnlgckygwe cnmeagegnn iirrqptlte
      301 wqhlfsmagf sriplnhtkd nfsvegeill eimgkeeecl ilgykgcpmf flsawkpkve
      361 dghynsnsts hkfgqgfnpn plppqplqpf peglilnrlt alaeihdisk nlcckyklsl
      421 altgaskvnn mneaildpnk khafffqiis cyakdrksye fmfvseymir glqafekafe
      481 srdgyhfeps ltkvedlryf mlkdcnidva vaiclqnrht sdevyivefy wppieseisk
      541 slalrifhdl khmkttfvtv kvqgpeikfq eeaissipts sntamplkia eeardihaie
      601 inahieqive tkrnkqrksw skvwvdfdkf ekhgkqvakc khcpkeltgs sksgtthlnn
      661 hskvcpgkkk qhqesqlilp vdtnersatf dqershldlv kmvirhqypl dlagqeafkn
      721 fvkglqpmye fqsrdillsd ihriyneere klqlyfdqla cklnltvslw knnhgktayc
      781 cliahfiddg welkmkilgl rklehvydtk vvggiirsfv sewniskkvc sitvdnsfln
      841 dgmvhqiren cvseqgslss ahwfisstll edgfremdsi lsklwksiey vtetthgkln
      901 fqeavnqvkl qggkswhels fklesdsdil dsalrsreif ckleqiddnf mlnlskeewe
      961 kavtlqscfk cfddikgtqs ltanlyfpkl cniyeefgql kksnhpfvrl mkrkfdnyws
     1021 lcnvaftiaa aldprlkfrs scnetydles mmklirfrkv lmdvyfeyan eaknlsasss
     1081 vlddsnslta ettkdcivsy fskfasasnv kevasqksel dcyleetllp sdadilswwr
     1141 vnsqrfptla kmacdflaip vsvsspcsni samtinpays sldpesmeal vcsqnwlest
     1201 kendgehhep mqnmdkrkrk meendtptvk vfknrpheka ssngdiasdf nkndgslsfd
     1261 nwmepqcsss esvgekaeim easvcnrdrl essigktnhg sniaaaigip ydeppfnsnq
     1321 ldrfqsssse sddettlrkq gswcredvrt ylvssftnke kkrlnrwkrs elsgkkigrd
     1381 kefqlmgekl tpllmvphcd etlleyyidd svvntyfkll kkrsdkfpnv yikhysfdsl
     1441 iatcliegsk sedevlawfk deklrgvhkl flpmclsahw vlfcvdtkek kiswldpips
     1501 srimsnsvek qkifqwfaly llpefghnda ekwpfevrtd ipkqensidc gvfvmkygdc
     1561 lmhgdffpft qkdmihfrrr ifldiyrgrl hgk
//
LOCUS       XP_040943908            1155 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040943908
VERSION     XP_040943908.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087974.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1155
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2 isoform X2"
                     /calculated_mol_wt=133190
     Region          184..228
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          539..630
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          681..759
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          968..1148
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1155
                     /gene="LOC107939712"
                     /coded_by="XM_041087974.1:180..3647"
                     /db_xref="GeneID:107939712"
ORIGIN      
        1 mdttipippa isldkvsiqi lyllnlfnlf qrglqafeka fesrdgyhfe psltkvedlr
       61 yfmlkdcnid vavaiclqnr htsdevyive fywppiesei skslalrifh dlkhmkttfv
      121 tvkvqgpeik fqeeaissip tssntamplk iaeeardiha ieinahieqi vetkrnkqrk
      181 swskvwvdfd kfekhgkqva kckhcpkelt gssksgtthl nnhskvcpgk kkqhqesqli
      241 lpvdtnersa tfdqershld lvkmvirhqy pldlagqeaf knfvkglqpm yefqsrdill
      301 sdihriynee reklqlyfdq lacklnltvs lwknnhgkta yccliahfid dgwelkmkil
      361 glrklehvyd tkvvggiirs fvsewniskk vcsitvdnsf lndgmvhqir encvseqgsl
      421 ssahwfisst lledgfremd silsklwksi eyvtetthgk lnfqeavnqv klqggkswhe
      481 lsfklesdsd ildsalrsre ifckleqidd nfmlnlskee wekavtlqsc fkcfddikgt
      541 qsltanlyfp klcniyeefg qlkksnhpfv rlmkrkfdny wslcnvafti aaaldprlkf
      601 rsscnetydl esmmklirfr kvlmdvyfey aneaknlsas ssvlddsnsl taettkdciv
      661 syfskfasas nvkevasqks eldcyleetl lpsdadilsw wrvnsqrfpt lakmacdfla
      721 ipvsvsspcs nisamtinpa yssldpesme alvcsqnwle stkendgehh epmqnmdkrk
      781 rkmeendtpt vkvfknrphe kassngdias dfnkndgsls fdnwmepqcs ssesvgekae
      841 imeasvcnrd rlessigktn hgsniaaaig ipydeppfns nqldrfqsss sesddettlr
      901 kqgswcredv rtylvssftn kekkrlnrwk rselsgkkig rdkefqlmge kltpllmvph
      961 cdetlleyyi ddsvvntyfk llkkrsdkfp nvyikhysfd sliatclieg sksedevlaw
     1021 fkdeklrgvh klflpmclsa hwvlfcvdtk ekkiswldpi pssrimsnsv ekqkifqwfa
     1081 lyllpefghn daekwpfevr tdipkqensi dcgvfvmkyg dclmhgdffp ftqkdmihfr
     1141 rrifldiyrg rlhgk
//
LOCUS       XP_016723680             727 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g21065 [Gossypium
            hirsutum].
ACCESSION   XP_016723680
VERSION     XP_016723680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..727
                     /product="pentatricopeptide repeat-containing protein
                     At4g21065"
                     /calculated_mol_wt=81152
     Region          13..725
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          54..81
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          91..116
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          120..147
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          153..215
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          219..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          253..282
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          288..317
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          321..348
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          354..418
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          422..450
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          456..485
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          492..518
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          558..587
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..727
                     /gene="LOC107935563"
                     /coded_by="XM_016868191.2:114..2297"
                     /db_xref="GeneID:107935563"
ORIGIN      
        1 mrhfplnsit skkrplylfn lkirnstnng dfadtlkiys smlrdthvhg nsftfpllfk
       61 acaslnslhd gtklhahvlq lgfqqdifvq tslldmyskc sdlasarnvf demvmrnvvc
      121 wntmisaycr cfrvmeamnl lkemwvigfe lnastfvsvi aactnlrlgl smhccvfklg
      181 llhceiplan svvnmyvkfg liddarsifd tvdersilsw ttiiggyvsv gnvgeafnlf
      241 nrmrqmgcvs qdmvlfvkii sgcvksgnll lassvhslvl ksgfhgeasi dnsvlnmysk
      301 cgdivsarrv femvdekcif lwtsmiaant qhgypaeald lfksllrtdl kpneatiasi
      361 lsacadlgsl signeiehyv klnglasnqq vqtslihmyc kcgridkaee vfagvlhkdl
      421 avwssmingy aihgmgneal klfhrmqitk pcsldhvvft sillacshsg lvedglkyyk
      481 smkddygiep giehytclvd llgraghfdl alktiqempl qveaqvwapl lsscrkhcki
      541 elgeyvakkl ldlnpgntss yvlmaniyts agkwkeaakt rsmmrnkglf kepgwsqiei
      601 ngsvhvfmag drshhrsagi yeklnelntk lkeagyvaet dmvvhdlene ekeesmkvhs
      661 erlavawgli gtepgttlti iknlqtcgdc hsflkftskv tgrhlivrdg qrfhhfqlgs
      721 csckdfw
//
LOCUS       XP_016728571              69 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L38 [Gossypium hirsutum].
ACCESSION   XP_016728571
VERSION     XP_016728571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873082.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..69
                     /product="60S ribosomal protein L38"
                     /calculated_mol_wt=7803
     Region          2..68
                     /region_name="Ribosomal_L38e"
                     /note="Ribosomal L38e protein family; pfam01781"
                     /db_xref="CDD:460326"
     CDS             1..69
                     /gene="LOC107939716"
                     /coded_by="XM_016873082.2:132..341"
                     /db_xref="GeneID:107939716"
ORIGIN      
        1 mpkqiheikd flltarrkda rsvkikkskd vvkfkvrcsk ylytlcvsda ekadklkqsl
       61 ppglsvqdl
//
LOCUS       XP_016723687            1086 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            [Gossypium hirsutum].
ACCESSION   XP_016723687
VERSION     XP_016723687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868198.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1086
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like"
                     /calculated_mol_wt=125468
     Region          286..328
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          648..742
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          793..873
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1086
                     /gene="LOC107935573"
                     /coded_by="XM_016868198.2:132..3392"
                     /db_xref="GeneID:107935573"
ORIGIN      
        1 mledvcfrye lpvaltwace antdkimldg kkytlfmekt sfyasnegsq cfmeacakhh
       61 iqegqaiagk alqssanfhf kpsitkliks dyplfnaaql fgnhavvaic lqnhyiigdv
      121 yvvefywpei esekseslal difndlknmk kkfvtirvgs nevgfereai sttlqgtmht
      181 rnaqpasstn dllssnttws lntvqpcdvh emerhglver vesapfstpn pmsyggvlqt
      241 qgphkqeige kdfisqtvsi gdyeivkaym etckvprtkr rkylskvwld fdkfevngkq
      301 vakckhcnkd ftgssksgtt hlknhlercq skkiknqkrq litseigdli trdsdesnft
      361 fdqersrldf akmiikhqcp ldmaeqeffk ifvknlqpmf efqskdills dihriykeek
      421 eklqlyfdqv acnfnltisl wknnlgktay ccliahfidd nwgpkmkiia ckplehiydt
      481 kalneiiqss vlewniskkv fsitmdnpyl sddmfqkike tcfrdqgsfp lthwfigctf
      541 ikdgfremdl illklrksie yvseiaqgkl kfeevvnqvk lqggkswddl slrldsdfgv
      601 lhsalesrei fcqlekidsn fklnpsveew emvlafhscl kcfddiegtq sltanlyfpk
      661 lcniykkflh lgksnypivt lmkrkfdyyw slcnlafsva tildprlkfk fvefsyteiy
      721 ghdskmhlnr fhkvltdvyy eyanearnls kstsdlddsn sstteidndc ilesfskfas
      781 asnfnevasw kseldcylde pllpldgafd ilywwcintk rfptlakmar dflampisil
      841 apclnfnami tnptynnlnp esmealvcsq nwleipkend genhgpmqnm ykrkwkmedh
      901 snvvevsknw nreeanssgd iakgsiknep nhgrnitali eipkddspfn nnksgqfqsl
      961 ssesdneitl keqgswcked vraylvsrft gkenkrlnrw ktneligkli grdkefclmg
     1021 dklvpllmvp hgdetrkeyy idnsvvntff kllkkrsdrf pkayinhysf dsqiairnfi
     1081 lheely
//
LOCUS       XP_040943910            1571 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943910
VERSION     XP_040943910.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087976.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1571
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=182454
     Region          9..356
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          591..635
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          943..1037
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1080..1160
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          <1373..1556
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1571
                     /gene="LOC107935578"
                     /coded_by="XM_041087976.1:1..4716"
                     /db_xref="GeneID:107935578"
ORIGIN      
        1 massfsdtal nlllscavai edghlksada flqnililad errnkyqsev vkyfadalvr
       61 rayglhpass flafpanpap yyhynsyhin gviekvinda lmgnrrlhli dfsipyydrf
      121 qysvlrtlpn fldypppvrv syilppflkk hvkfprqmef ltrdakevnv nledllkvvy
      181 gnslaevdec eidfkrrdde mvvvyykfkl eklvrdakam erelvrlkei nptivimldf
      241 ysnhthsnfl tcfkdsfqys lktvdwwcdl glffyeyece cnieawegnn virrhptlte
      301 wqhlfsmagf sriplnqrkd nlsvedesll eimgeeeecl ilgnkgcpmf flsawkpkve
      361 dghfnsnstn hkfgqgfnpn plprqplqpf leglilnrla alaeihdisk dlcckyklsl
      421 altwaakvnn mnetisdlnk krafsiqrns cyvkdrksfy fmedyegtcw gpsiikkefe
      481 srdgyhfeps ltkvedlryf dldyynidva vaiclqnrrt sdevyiveff wppteseisk
      541 skalrifddm khmkttfvtv kvqvpeikfq egpynkivet krnkqrksws kvwvdfdkfe
      601 ehgkqvakck hclkvftgss ksgtthlnnh skvcpgkkkq nqesqlilpv dtnersstfd
      661 qershldlvk mvikhqypla lvgqeafknf vkglqpmfef qsrdkllsdf ykekkrevrq
      721 gfdklackfn lrvtlwkngl gktaycclia qfidddwklk mkilafktlk hiydtkalse
      781 iiqrsvsewn ldekiysitm ddpslneemf qqiketcvrd qgslssahwf iscnfledgs
      841 remysilhkf resieyvtet thgrlkfqea vdqvklqggk slddlsfkle sefdiltsal
      901 ksreifcqle qidgnfklnp smeewekaia lksclkcfnd ikgtqsitvs lyfpmlcdiy
      961 kkflqleksn hsfltlmkrk fdrywslcnl elavaavldp rlkfkivels ynviyghdnk
     1021 mqlnrfykvl tdvyckytng arnsiastsi lgdsnsltte tandcildsf nnflpswkse
     1081 ledylgesep alpldgdilg wwrvnslrlp tlakmardhl amlvavsmpc svvsamiths
     1141 synsldpdsm ealvcsqnwl etlkenegen heltqntekr krkmdeedty vvksfkpsnc
     1201 ekanstkdia kdsnnneelq ivksckngck eetdsgnkyk aankmnvgke vipsksseln
     1261 lgrntndvie ilsedtsidt nqldqvesss sesdnettlk dqgswceqdv kayllsrfts
     1321 kehkrldkwq kkcernelng kmigrdvefk lmgnelaplf mvpqddetre eyyindsvvn
     1381 vffellkkrs dkfpnayinh ysfsshlvtq liegfksehe vlawlkvekl rgvhkmllpl
     1441 cisshwvlly vdikekifsw ldpnpssqil sfhfekpvkv lqcfksfllp klgysdanew
     1501 pfvvrndipk qknsvdcavf vmkygdclth gecfpfkqed mvhfrrrifl diyrgrlhgk
     1561 kmkidvlfkn s
//
LOCUS       XP_040943911            1570 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943911
VERSION     XP_040943911.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087977.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1570
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=182325
     Region          9..356
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          591..635
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          943..1037
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1080..1160
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          <1372..1555
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1570
                     /gene="LOC107935578"
                     /coded_by="XM_041087977.1:1..4713"
                     /db_xref="GeneID:107935578"
ORIGIN      
        1 massfsdtal nlllscavai edghlksada flqnililad errnkyqsev vkyfadalvr
       61 rayglhpass flafpanpap yyhynsyhin gviekvinda lmgnrrlhli dfsipyydrf
      121 qysvlrtlpn fldypppvrv syilppflkk hvkfprqmef ltrdakevnv nledllkvvy
      181 gnslaevdec eidfkrrdde mvvvyykfkl eklvrdakam erelvrlkei nptivimldf
      241 ysnhthsnfl tcfkdsfqys lktvdwwcdl glffyeyece cnieawegnn virrhptlte
      301 wqhlfsmagf sriplnqrkd nlsvedesll eimgeeeecl ilgnkgcpmf flsawkpkve
      361 dghfnsnstn hkfgqgfnpn plprqplqpf leglilnrla alaeihdisk dlcckyklsl
      421 altwaakvnn mnetisdlnk krafsiqrns cyvkdrksfy fmedyegtcw gpsiikkefe
      481 srdgyhfeps ltkvedlryf dldyynidva vaiclqnrrt sdevyiveff wppteseisk
      541 skalrifddm khmkttfvtv kvqvpeikfq egpynkivet krnkqrksws kvwvdfdkfe
      601 ehgkqvakck hclkvftgss ksgtthlnnh skvcpgkkkq nqesqlilpv dtnersstfd
      661 qershldlvk mvikhqypla lvgqeafknf vkglqpmfef qsrdkllsdf ykekkrevrq
      721 gfdklackfn lrvtlwkngl gktaycclia qfidddwklk mkilafktlk hiydtkalse
      781 iiqrsvsewn ldekiysitm ddpslneemf qqiketcvrd qgslssahwf iscnfledgs
      841 remysilhkf resieyvtet thgrlkfqea vdqvklqggk slddlsfkle sefdiltsal
      901 ksreifcqle qidgnfklnp smeewekaia lksclkcfnd ikgtqsitvs lyfpmlcdiy
      961 kkflqleksn hsfltlmkrk fdrywslcnl elavaavldp rlkfkivels ynviyghdnk
     1021 mqlnrfykvl tdvyckytng arnsiastsi lgdsnsltte tandcildsf nnflpswkse
     1081 ledylgesep alpldgdilg wwrvnslrlp tlakmardhl amlvavsmpc svvsamiths
     1141 synsldpdsm ealvcsqnwl etlkenegen heltqntekr krkmdeedty vvksfkpsnc
     1201 ekanstkdia kdsnnnelqi vksckngcke etdsgnkyka ankmnvgkev ipsksselnl
     1261 grntndviei lsedtsidtn qldqvessss esdnettlkd qgswceqdvk ayllsrftsk
     1321 ehkrldkwqk kcernelngk migrdvefkl mgnelaplfm vpqddetree yyindsvvnv
     1381 ffellkkrsd kfpnayinhy sfsshlvtql iegfksehev lawlkveklr gvhkmllplc
     1441 isshwvllyv dikekifswl dpnpssqils fhfekpvkvl qcfksfllpk lgysdanewp
     1501 fvvrndipkq knsvdcavfv mkygdclthg ecfpfkqedm vhfrrrifld iyrgrlhgkk
     1561 mkidvlfkns
//
LOCUS       XP_040943912            1513 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943912
VERSION     XP_040943912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087978.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1513
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=175559
     Region          9..356
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          591..635
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          943..1037
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1080..1160
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          <1373..1462
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1513
                     /gene="LOC107935578"
                     /coded_by="XM_041087978.1:1..4542"
                     /db_xref="GeneID:107935578"
ORIGIN      
        1 massfsdtal nlllscavai edghlksada flqnililad errnkyqsev vkyfadalvr
       61 rayglhpass flafpanpap yyhynsyhin gviekvinda lmgnrrlhli dfsipyydrf
      121 qysvlrtlpn fldypppvrv syilppflkk hvkfprqmef ltrdakevnv nledllkvvy
      181 gnslaevdec eidfkrrdde mvvvyykfkl eklvrdakam erelvrlkei nptivimldf
      241 ysnhthsnfl tcfkdsfqys lktvdwwcdl glffyeyece cnieawegnn virrhptlte
      301 wqhlfsmagf sriplnqrkd nlsvedesll eimgeeeecl ilgnkgcpmf flsawkpkve
      361 dghfnsnstn hkfgqgfnpn plprqplqpf leglilnrla alaeihdisk dlcckyklsl
      421 altwaakvnn mnetisdlnk krafsiqrns cyvkdrksfy fmedyegtcw gpsiikkefe
      481 srdgyhfeps ltkvedlryf dldyynidva vaiclqnrrt sdevyiveff wppteseisk
      541 skalrifddm khmkttfvtv kvqvpeikfq egpynkivet krnkqrksws kvwvdfdkfe
      601 ehgkqvakck hclkvftgss ksgtthlnnh skvcpgkkkq nqesqlilpv dtnersstfd
      661 qershldlvk mvikhqypla lvgqeafknf vkglqpmfef qsrdkllsdf ykekkrevrq
      721 gfdklackfn lrvtlwkngl gktaycclia qfidddwklk mkilafktlk hiydtkalse
      781 iiqrsvsewn ldekiysitm ddpslneemf qqiketcvrd qgslssahwf iscnfledgs
      841 remysilhkf resieyvtet thgrlkfqea vdqvklqggk slddlsfkle sefdiltsal
      901 ksreifcqle qidgnfklnp smeewekaia lksclkcfnd ikgtqsitvs lyfpmlcdiy
      961 kkflqleksn hsfltlmkrk fdrywslcnl elavaavldp rlkfkivels ynviyghdnk
     1021 mqlnrfykvl tdvyckytng arnsiastsi lgdsnsltte tandcildsf nnflpswkse
     1081 ledylgesep alpldgdilg wwrvnslrlp tlakmardhl amlvavsmpc svvsamiths
     1141 synsldpdsm ealvcsqnwl etlkenegen heltqntekr krkmdeedty vvksfkpsnc
     1201 ekanstkdia kdsnnneelq ivksckngck eetdsgnkyk aankmnvgke vipsksseln
     1261 lgrntndvie ilsedtsidt nqldqvesss sesdnettlk dqgswceqdv kayllsrfts
     1321 kehkrldkwq kkcernelng kmigrdvefk lmgnelaplf mvpqddetre eyyindsvvn
     1381 vffellkkrs dkfpnayinh ysfsshlvtq liegfksehe vlawlkvekl rgvhkmllpl
     1441 cisshwvlly vdikekifsw ldpnpssqil sfhfekpvkv lqcfksfllp klgysdanew
     1501 pfvvrndipk qkk
//
LOCUS       XP_040943913            1194 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 1 isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040943913
VERSION     XP_040943913.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087979.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1194
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 1 isoform X4"
                     /calculated_mol_wt=138331
     Region          214..258
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          566..660
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          703..783
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          <996..1179
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1194
                     /gene="LOC107935578"
                     /coded_by="XM_041087979.1:855..4439"
                     /db_xref="GeneID:107935578"
ORIGIN      
        1 mdtsipippt isldkgliln rlaalaeihd iskdlcckyk lslaltwaak vnnmnetisd
       61 lnkkrafsiq rnscyvkdrk sfyfmedyeg tcwgpsiikk efesrdgyhf epsltkvedl
      121 ryfdldyyni dvavaiclqn rrtsdevyiv effwpptese iskskalrif ddmkhmkttf
      181 vtvkvqvpei kfqegpynki vetkrnkqrk swskvwvdfd kfeehgkqva kckhclkvft
      241 gssksgtthl nnhskvcpgk kkqnqesqli lpvdtnerss tfdqershld lvkmvikhqy
      301 plalvgqeaf knfvkglqpm fefqsrdkll sdfykekkre vrqgfdklac kfnlrvtlwk
      361 nglgktaycc liaqfidddw klkmkilafk tlkhiydtka lseiiqrsvs ewnldekiys
      421 itmddpslne emfqqiketc vrdqgslssa hwfiscnfle dgsremysil hkfresieyv
      481 tetthgrlkf qeavdqvklq ggkslddlsf klesefdilt salksreifc qleqidgnfk
      541 lnpsmeewek aialksclkc fndikgtqsi tvslyfpmlc diykkflqle ksnhsfltlm
      601 krkfdrywsl cnlelavaav ldprlkfkiv elsynviygh dnkmqlnrfy kvltdvycky
      661 tngarnsias tsilgdsnsl ttetandcil dsfnnflpsw kseledylge sepalpldgd
      721 ilgwwrvnsl rlptlakmar dhlamlvavs mpcsvvsami thssynsldp dsmealvcsq
      781 nwletlkene genheltqnt ekrkrkmdee dtyvvksfkp sncekanstk diakdsnnne
      841 elqivksckn gckeetdsgn kykaankmnv gkevipskss elnlgrntnd vieilsedts
      901 idtnqldqve ssssesdnet tlkdqgswce qdvkayllsr ftskehkrld kwqkkcerne
      961 lngkmigrdv efklmgnela plfmvpqdde treeyyinds vvnvffellk krsdkfpnay
     1021 inhysfsshl vtqliegfks ehevlawlkv eklrgvhkml lplcisshwv llyvdikeki
     1081 fswldpnpss qilsfhfekp vkvlqcfksf llpklgysda newpfvvrnd ipkqknsvdc
     1141 avfvmkygdc lthgecfpfk qedmvhfrrr ifldiyrgrl hgkkmkidvl fkns
//
LOCUS       XP_040943914             210 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-like-specific protease 1A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040943914
VERSION     XP_040943914.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087980.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..210
                     /product="ubiquitin-like-specific protease 1A isoform X1"
                     /calculated_mol_wt=24778
     Region          <22..205
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..210
                     /gene="LOC121214407"
                     /coded_by="XM_041087980.1:30..662"
                     /db_xref="GeneID:121214407"
ORIGIN      
        1 mgnelaplfm vpqddetree yyindsvvnv ffellkkrsd kfpnayinhy sfsshlvtql
       61 iegfksehev lawlkveklr gvhkmllplc isshwvllyv dikekifswl dpnpssqils
      121 fhfekpvkvl qcfksfllpk lgysdanewp fvvrndipkq knsvdcavfv mkygdclthg
      181 ecfpfkqedm vhfrrrifld iyrgrlhrkk
//
LOCUS       XP_040943915             162 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ubiquitin-like-specific protease 1B isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943915
VERSION     XP_040943915.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087981.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..162
                     /product="putative ubiquitin-like-specific protease 1B
                     isoform X2"
                     /calculated_mol_wt=18960
     Region          <22..161
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..162
                     /gene="LOC121214407"
                     /coded_by="XM_041087981.1:30..518"
                     /db_xref="GeneID:121214407"
ORIGIN      
        1 mgnelaplfm vpqddetree yyindsvvnv ffellkkrsd kfpnayinhy sfsshlvtql
       61 iegfksehev lawlkveklr gvhkmllplc isshwvllyv dikekifswl dpnpssqils
      121 fhfekpvkvl qcfksfllpk lgysdanewp fvvrndipkq kk
//
LOCUS       XP_040943917            1620 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943917
VERSION     XP_040943917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087983.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1620
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=187607
     Region          9..358
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          621..665
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          1002..1093
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1144..1222
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1431..1612
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1620
                     /gene="LOC107943691"
                     /coded_by="XM_041087983.1:354..5216"
                     /db_xref="GeneID:107943691"
ORIGIN      
        1 mtssffdtal rlllscakai eggdlksada flhnililad erpypyqsrv vkyfadalvr
       61 qayglhpass yfafpvdpap yyhynsyhin gvikkvidda lmgnrrlhli dfsipyyyrf
      121 ensvlrtlpn ffgyplpvrv syilppflke yvefsrqmef ltkdakevnv kledelkvvy
      181 gnslaevdec eidfkrrrdd emvviyykfk ldklvrdaka merelvrlke inpttvimld
      241 fysnhthsnf ltcfkdsfqy slktldywae ldhyldgkye wecnieageg nniirrhpal
      301 tewqhlflma gfsriplnhr kdnlsvedes fleimgkeee clilgnkgcp mfflsawkpk
      361 vedghfnsns tnhkfgqgfn pnplprqplq pfleglilnr laalaeihdi skdlcckyql
      421 slaltwaskv nnmnetisdl nkkhvvfiqs nscyvkdsks ynfmlvsedm isgltiekaf
      481 esrdgyrfep sitkveayry fmledynidv avaiclqnrh tsdevyvvef fwppteseis
      541 kslalrifdd fkhmkttfvt vkvqgpeikf qeeaissipt ssntamplki aenahieqin
      601 fnddsqivet krnkqrksws kvwvdfdkse eegkqvakck hcpkvltgss ksgtthlnnh
      661 lkvcpgkkkq nqesqlilpv dtnersstfy qerkkqnqes qlilpvdtne rssmfdqers
      721 hldlvkmvir hqypldlagq eafknfvkgl qpmyefqsrd kllsdihhiy neereklqly
      781 fdklacklnl tvslwknnhg ktayccliah fiddgwelki kilglrkleh vydtkvvggi
      841 igsfvsewni skkvcsitvd nsflndgmvh qirencvseq gslstahwfi sftlledgfr
      901 emdtilsklw ksieyvtett hgklnfqeav nqvklqggks wdelsfkles dsdildsalr
      961 sreifckleq iddnfmlnls keewekavtl qncfkcfddi kgtqsltanl yfpklcnmye
     1021 efgqlkksnh pfvilmkrkf dnywslcnva ftsaaaldpr lkfrsscnet ydlesmmkli
     1081 rfrkvlmdvy seyaneaknl sasssvlddy nslaaqttkd civsyfskfa sasnvkevas
     1141 qkseldcyle etllpsdadi lgwwrvnser fptlakmard flaipvsvss pcsnisamti
     1201 npvyssldpe smealvcsqn wlestkeneg dhhepmqnmd krkrkmeend tstvkvfknr
     1261 phekassngd iasdfnkndg slsfdnwmep qcspsesvge kaeimeasvc nrdrlessig
     1321 ktnhgrniaa aieipndeps fnsnqsdqfq ssssesddet tlreqgswcr edvrtylvss
     1381 ftnkekkrln rwkrcelsgk kigqdkefql mgenltpllm vphcdetlre yyiddsvvnt
     1441 yfkllkkrsd kfpnvyikhy sfdsliatcl iegsksedev lawfkdeklr gvhklflpmc
     1501 lsahwvlfcv dtkekkiswl dwipssrmms insvekqkif qwfilyllpq fgyndaekwp
     1561 fevrtdipkq ensidcgvfv mkygdclmhg dffpftqkdm ihfrrhifld iyrgrlhgkr
//
LOCUS       XP_040943918            1612 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943918
VERSION     XP_040943918.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087984.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1612
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=186674
     Region          9..358
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          613..657
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          994..1085
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1136..1214
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1423..1604
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1612
                     /gene="LOC107943691"
                     /coded_by="XM_041087984.1:353..5191"
                     /db_xref="GeneID:107943691"
ORIGIN      
        1 mtssffdtal rlllscakai eggdlksada flhnililad erpypyqsrv vkyfadalvr
       61 qayglhpass yfafpvdpap yyhynsyhin gvikkvidda lmgnrrlhli dfsipyyyrf
      121 ensvlrtlpn ffgyplpvrv syilppflke yvefsrqmef ltkdakevnv kledelkvvy
      181 gnslaevdec eidfkrrrdd emvviyykfk ldklvrdaka merelvrlke inpttvimld
      241 fysnhthsnf ltcfkdsfqy slktldywae ldhyldgkye wecnieageg nniirrhpal
      301 tewqhlflma gfsriplnhr kdnlsvedes fleimgkeee clilgnkgcp mfflsawkpk
      361 vedghfnsns tnhkfgqgfn pnplprqplq pfleglilnr laalaeihdi skdlcckyql
      421 slaltwaskv nnmnetisdl nkkhvvfiqs nscyvkdsks ynfmlvsedm isgltiekaf
      481 esrdgyrfep sitkveayry fmledynidv avaiclqnrh tsdevyvvef fwppteseis
      541 kslalrifdd fkhmkttfvt vkvqgpeikf qeeaissipt ssntamplki aenahieqiv
      601 etkrnkqrks wskvwvdfdk seeegkqvak ckhcpkvltg ssksgtthln nhlkvcpgkk
      661 kqnqesqlil pvdtnersst fyqerkkqnq esqlilpvdt nerssmfdqe rshldlvkmv
      721 irhqypldla gqeafknfvk glqpmyefqs rdkllsdihh iyneereklq lyfdklackl
      781 nltvslwknn hgktayccli ahfiddgwel kikilglrkl ehvydtkvvg giigsfvsew
      841 niskkvcsit vdnsflndgm vhqirencvs eqgslstahw fisftlledg fremdtilsk
      901 lwksieyvte tthgklnfqe avnqvklqgg kswdelsfkl esdsdildsa lrsreifckl
      961 eqiddnfmln lskeewekav tlqncfkcfd dikgtqslta nlyfpklcnm yeefgqlkks
     1021 nhpfvilmkr kfdnywslcn vaftsaaald prlkfrsscn etydlesmmk lirfrkvlmd
     1081 vyseyaneak nlsasssvld dynslaaqtt kdcivsyfsk fasasnvkev asqkseldcy
     1141 leetllpsda dilgwwrvns erfptlakma rdflaipvsv sspcsnisam tinpvyssld
     1201 pesmealvcs qnwlestken egdhhepmqn mdkrkrkmee ndtstvkvfk nrphekassn
     1261 gdiasdfnkn dgslsfdnwm epqcspsesv gekaeimeas vcnrdrless igktnhgrni
     1321 aaaieipnde psfnsnqsdq fqssssesdd ettlreqgsw credvrtylv ssftnkekkr
     1381 lnrwkrcels gkkigqdkef qlmgenltpl lmvphcdetl reyyiddsvv ntyfkllkkr
     1441 sdkfpnvyik hysfdsliat cliegsksed evlawfkdek lrgvhklflp mclsahwvlf
     1501 cvdtkekkis wldwipssrm msinsvekqk ifqwfilyll pqfgyndaek wpfevrtdip
     1561 kqensidcgv fvmkygdclm hgdffpftqk dmihfrrhif ldiyrgrlhg kr
//
LOCUS       XP_040943919            1602 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943919
VERSION     XP_040943919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087985.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1602
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=185470
     Region          12..364
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          623..667
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          978..1069
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1120..1198
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1414..1594
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1602
                     /gene="LOC107943687"
                     /coded_by="XM_041087985.1:265..5073"
                     /db_xref="GeneID:107943687"
ORIGIN      
        1 masffdidtd talrlllsca eaieeygdlk sadaflhdil iladqgtswf pneigvvkyf
       61 adalvrrayg lhpascyftf pvdpapyyhy nsyhingvie kviddafmgn rrlhvidfsi
      121 pyyyrfensv lrtlpnffgd plpvrvsyil ppflkeyvef srqmeiltkd aeevnvklen
      181 elkvvygnsl aevdeceidf krrrddemvv vyykfkldkl vreakamere larlkeinpt
      241 ivimldfysn hsdsnfltcf kdsfqyslkt ldywaeldyy lgeeygwecn reagegnnii
      301 rrhptltewq hlfsmagfsr iplnhrkdnl svedeswlei mgekeeclil gyngcpmffl
      361 sawklkvkdg hfnsistnht fgqgfnpnpl plqplqpfle glilnrlatl aeihdiskdl
      421 cckyklslal twaaevnnmn etisdpkkkh afsiqsnscy vkdgksyqfm faseclisgl
      481 iiekaleard gyhfepsvtk vlpkvedfry smlkdcnidv vvaiclqnrh tsdevyivef
      541 ywppteseis kflalrifdd fkhmkttfvt vkvrgpeikf qeeaissvpt ssntampski
      601 aenahieqiv etkrnkqrks wskvwedfdk feehgkqvak ckhclkvftg ssksgtthlk
      661 nhskvcpgkk kqnqesqlil pvdtnersst fdqershldl vkmvirhqyp ldlagqeafk
      721 nfveglqpmy efqsrdklls dihriyneer eklqlyfdql acklnltvsl wknnhgktaf
      781 ccliahfidd gwelkmkilg lrklehvhdt kvvggiirsf vsewkiskkv csitvdnsfl
      841 ndgmvhqire ncvseqgsls sahwfisstl ledgfremds ihsklwksie yvtetthgkl
      901 nfqeavnqvk lqggkswdel sfklesdsdi ldsalrsrei fckleqiddn fmlnlskeew
      961 ekavtlqscf kcfddikgtq sltanlyfpk lcnmyeefgq lkksnhpfvi lmkrkfdnyw
     1021 slcnvaftia aaldprlkfr fscnetydpe smmklkrfrk vlmdvyfeya neaknlsass
     1081 svmddsnslt aettkdcivs yfskfasasn vnevasqkse ldcyleetll psdadilgww
     1141 rvnsqrfptl akmardflai pvsvsspcsn iramtinpay ssldpesmea lvcsqnwles
     1201 tkenngelhe pmqnmdkrkr kmeendtstv kvfknrthek assngdiasd fnkndgslsf
     1261 dnwmepqcsp sesvgekaei measvcnrdr lessigtkfl dtetnhgrni aaaieipnfd
     1321 epsfnsnqld qiqssssesd dettlreqgs wcredvrtyl vssftnkekk rlnrwkrsel
     1381 sgkkigrdke fqlmgenltp llvaphcdet lreyyiddsv vntffkllkk rsdkfpnvyi
     1441 khysfdsqia tflikgskle devlawfkde klrgvhklfl pmclsahwvl fcvdtkekki
     1501 swldpipssr imsnsfekqk ifqwftlyll pqfgyndaek wpfevrtdip kqensidcgv
     1561 fvmkygdclm hddffpftqk dmihfrrrif ldiyrgrlhg kr
//
LOCUS       XP_040943920            1596 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943920
VERSION     XP_040943920.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087986.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1596
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=184763
     Region          12..364
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          623..667
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          978..1069
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1120..1198
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1408..1588
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1596
                     /gene="LOC107943687"
                     /coded_by="XM_041087986.1:265..5055"
                     /db_xref="GeneID:107943687"
ORIGIN      
        1 masffdidtd talrlllsca eaieeygdlk sadaflhdil iladqgtswf pneigvvkyf
       61 adalvrrayg lhpascyftf pvdpapyyhy nsyhingvie kviddafmgn rrlhvidfsi
      121 pyyyrfensv lrtlpnffgd plpvrvsyil ppflkeyvef srqmeiltkd aeevnvklen
      181 elkvvygnsl aevdeceidf krrrddemvv vyykfkldkl vreakamere larlkeinpt
      241 ivimldfysn hsdsnfltcf kdsfqyslkt ldywaeldyy lgeeygwecn reagegnnii
      301 rrhptltewq hlfsmagfsr iplnhrkdnl svedeswlei mgekeeclil gyngcpmffl
      361 sawklkvkdg hfnsistnht fgqgfnpnpl plqplqpfle glilnrlatl aeihdiskdl
      421 cckyklslal twaaevnnmn etisdpkkkh afsiqsnscy vkdgksyqfm faseclisgl
      481 iiekaleard gyhfepsvtk vlpkvedfry smlkdcnidv vvaiclqnrh tsdevyivef
      541 ywppteseis kflalrifdd fkhmkttfvt vkvrgpeikf qeeaissvpt ssntampski
      601 aenahieqiv etkrnkqrks wskvwedfdk feehgkqvak ckhclkvftg ssksgtthlk
      661 nhskvcpgkk kqnqesqlil pvdtnersst fdqershldl vkmvirhqyp ldlagqeafk
      721 nfveglqpmy efqsrdklls dihriyneer eklqlyfdql acklnltvsl wknnhgktaf
      781 ccliahfidd gwelkmkilg lrklehvhdt kvvggiirsf vsewkiskkv csitvdnsfl
      841 ndgmvhqire ncvseqgsls sahwfisstl ledgfremds ihsklwksie yvtetthgkl
      901 nfqeavnqvk lqggkswdel sfklesdsdi ldsalrsrei fckleqiddn fmlnlskeew
      961 ekavtlqscf kcfddikgtq sltanlyfpk lcnmyeefgq lkksnhpfvi lmkrkfdnyw
     1021 slcnvaftia aaldprlkfr fscnetydpe smmklkrfrk vlmdvyfeya neaknlsass
     1081 svmddsnslt aettkdcivs yfskfasasn vnevasqkse ldcyleetll psdadilgww
     1141 rvnsqrfptl akmardflai pvsvsspcsn iramtinpay ssldpesmea lvcsqnwles
     1201 tkenngelhe pmqnmdkrkr kmeendtstv kvfknrthek assngdiasd fnkndgslsf
     1261 dnwmepqcsp sesvgekaei measvcnrdr lessigktnh grniaaaiei pnfdepsfns
     1321 nqldqiqsss sesddettlr eqgswcredv rtylvssftn kekkrlnrwk rselsgkkig
     1381 rdkefqlmge nltpllvaph cdetlreyyi ddsvvntffk llkkrsdkfp nvyikhysfd
     1441 sqiatflikg skledevlaw fkdeklrgvh klflpmclsa hwvlfcvdtk ekkiswldpi
     1501 pssrimsnsf ekqkifqwft lyllpqfgyn daekwpfevr tdipkqensi dcgvfvmkyg
     1561 dclmhddffp ftqkdmihfr rrifldiyrg rlhgkr
//
LOCUS       XP_040943921            1315 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943921
VERSION     XP_040943921.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087987.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1315
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=151566
     Region          12..364
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          623..667
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          978..1069
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1120..1198
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1315
                     /gene="LOC107943687"
                     /coded_by="XM_041087987.1:265..4212"
                     /db_xref="GeneID:107943687"
ORIGIN      
        1 masffdidtd talrlllsca eaieeygdlk sadaflhdil iladqgtswf pneigvvkyf
       61 adalvrrayg lhpascyftf pvdpapyyhy nsyhingvie kviddafmgn rrlhvidfsi
      121 pyyyrfensv lrtlpnffgd plpvrvsyil ppflkeyvef srqmeiltkd aeevnvklen
      181 elkvvygnsl aevdeceidf krrrddemvv vyykfkldkl vreakamere larlkeinpt
      241 ivimldfysn hsdsnfltcf kdsfqyslkt ldywaeldyy lgeeygwecn reagegnnii
      301 rrhptltewq hlfsmagfsr iplnhrkdnl svedeswlei mgekeeclil gyngcpmffl
      361 sawklkvkdg hfnsistnht fgqgfnpnpl plqplqpfle glilnrlatl aeihdiskdl
      421 cckyklslal twaaevnnmn etisdpkkkh afsiqsnscy vkdgksyqfm faseclisgl
      481 iiekaleard gyhfepsvtk vlpkvedfry smlkdcnidv vvaiclqnrh tsdevyivef
      541 ywppteseis kflalrifdd fkhmkttfvt vkvrgpeikf qeeaissvpt ssntampski
      601 aenahieqiv etkrnkqrks wskvwedfdk feehgkqvak ckhclkvftg ssksgtthlk
      661 nhskvcpgkk kqnqesqlil pvdtnersst fdqershldl vkmvirhqyp ldlagqeafk
      721 nfveglqpmy efqsrdklls dihriyneer eklqlyfdql acklnltvsl wknnhgktaf
      781 ccliahfidd gwelkmkilg lrklehvhdt kvvggiirsf vsewkiskkv csitvdnsfl
      841 ndgmvhqire ncvseqgsls sahwfisstl ledgfremds ihsklwksie yvtetthgkl
      901 nfqeavnqvk lqggkswdel sfklesdsdi ldsalrsrei fckleqiddn fmlnlskeew
      961 ekavtlqscf kcfddikgtq sltanlyfpk lcnmyeefgq lkksnhpfvi lmkrkfdnyw
     1021 slcnvaftia aaldprlkfr fscnetydpe smmklkrfrk vlmdvyfeya neaknlsass
     1081 svmddsnslt aettkdcivs yfskfasasn vnevasqkse ldcyleetll psdadilgww
     1141 rvnsqrfptl akmardflai pvsvsspcsn iramtinpay ssldpesmea lvcsqnwles
     1201 tkenngelhe pmqnmdkrkr kmeendtstv kvfknrthek assngdiasd fnkndgslsf
     1261 dnwmepqcsp sesvgekaei measvcnrdr lessigiinw ikfkahlpsl mmrqh
//
LOCUS       XP_040943922            1211 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 1 isoform X4
            [Gossypium hirsutum].
ACCESSION   XP_040943922
VERSION     XP_040943922.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087988.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1211
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 1 isoform X4"
                     /calculated_mol_wt=139810
     Region          238..282
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          593..684
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          735..813
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1023..1203
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1211
                     /gene="LOC107943687"
                     /coded_by="XM_041087988.1:1150..4785"
                     /db_xref="GeneID:107943687"
ORIGIN      
        1 mdtsipfppt irldkgliln rlatlaeihd iskdlcckyk lslaltwaae vnnmnetisd
       61 pkkkhafsiq snscyvkdgk syqfmfasec lisgliieka leardgyhfe psvtkvlpkv
      121 edfrysmlkd cnidvvvaic lqnrhtsdev yivefywppt eseiskflal rifddfkhmk
      181 ttfvtvkvrg peikfqeeai ssvptssnta mpskiaenah ieqivetkrn kqrkswskvw
      241 edfdkfeehg kqvakckhcl kvftgssksg tthlknhskv cpgkkkqnqe sqlilpvdtn
      301 ersstfdqer shldlvkmvi rhqypldlag qeafknfveg lqpmyefqsr dkllsdihri
      361 yneereklql yfdqlackln ltvslwknnh gktafcclia hfiddgwelk mkilglrkle
      421 hvhdtkvvgg iirsfvsewk iskkvcsitv dnsflndgmv hqirencvse qgslssahwf
      481 isstlledgf remdsihskl wksieyvtet thgklnfqea vnqvklqggk swdelsfkle
      541 sdsdildsal rsreifckle qiddnfmlnl skeewekavt lqscfkcfdd ikgtqsltan
      601 lyfpklcnmy eefgqlkksn hpfvilmkrk fdnywslcnv aftiaaaldp rlkfrfscne
      661 tydpesmmkl krfrkvlmdv yfeyaneakn lsasssvmdd snsltaettk dcivsyfskf
      721 asasnvneva sqkseldcyl eetllpsdad ilgwwrvnsq rfptlakmar dflaipvsvs
      781 spcsniramt inpayssldp esmealvcsq nwlestkenn gelhepmqnm dkrkrkmeen
      841 dtstvkvfkn rthekassng diasdfnknd gslsfdnwme pqcspsesvg ekaeimeasv
      901 cnrdrlessi gktnhgrnia aaieipnfde psfnsnqldq iqssssesdd ettlreqgsw
      961 credvrtylv ssftnkekkr lnrwkrsels gkkigrdkef qlmgenltpl lvaphcdetl
     1021 reyyiddsvv ntffkllkkr sdkfpnvyik hysfdsqiat flikgskled evlawfkdek
     1081 lrgvhklflp mclsahwvlf cvdtkekkis wldpipssri msnsfekqki fqwftlyllp
     1141 qfgyndaekw pfevrtdipk qensidcgvf vmkygdclmh ddffpftqkd mihfrrrifl
     1201 diyrgrlhgk r
//
LOCUS       XP_016732958             241 aa            linear   PLN 06-AUG-2024
DEFINITION  SWR1 complex subunit 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016732958
VERSION     XP_016732958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..241
                     /product="SWR1 complex subunit 2 isoform X1"
                     /calculated_mol_wt=27657
     Region          <146..208
                     /region_name="Brix"
                     /note="The Brix domain is found in a number of eukaryotic
                     proteins; cl00935"
                     /db_xref="CDD:469999"
     CDS             1..241
                     /gene="LOC107943686"
                     /coded_by="XM_016877469.2:268..993"
                     /db_xref="GeneID:107943686"
ORIGIN      
        1 mgtgkedtav fldrasrstr grrrrimsit kksqrllmcl ivtsmkmfep epdeevenda
       61 eerfrtkkrl ifpgkpsmkk kkvlsnldgd skdenltqkt sstqhhdapd daegeriirk
      121 strtsvivrq aerdairaal qatmkivlsg faaadeqlrl ttmvfknifp didintvkls
      181 scqrivllny nkdtklidfr hysirlqpvg vsrriqkfvq nhqvpdlrnl qdsglwirkr
      241 s
//
LOCUS       XP_016732959             237 aa            linear   PLN 06-AUG-2024
DEFINITION  SWR1 complex subunit 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016732959
VERSION     XP_016732959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="SWR1 complex subunit 2 isoform X2"
                     /calculated_mol_wt=27144
     Region          <146..208
                     /region_name="Brix"
                     /note="The Brix domain is found in a number of eukaryotic
                     proteins; cl00935"
                     /db_xref="CDD:469999"
     CDS             1..237
                     /gene="LOC107943686"
                     /coded_by="XM_016877470.2:271..984"
                     /db_xref="GeneID:107943686"
ORIGIN      
        1 mgtgkedtav fldrasrstr grrrrimsit kksqrllmcl ivtsmkmfep epdeevenda
       61 eerfrtkkrl ifpgkpsmkk kkvlsnldgd skdenltqkt sstqhhdapd daegeriirk
      121 strtsvivrq aerdairaal qatmkivlsg faaadeqlrl ttmvfknifp didintvkls
      181 scqrivllny nkdtklidfr hysirlqpvg vsrriqkfvq nhqvpdlrnl qdfsshl
//
LOCUS       XP_016727429             750 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727429
VERSION     XP_016727429.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871940.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727429.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..750
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=79959
     Region          4..731
                     /region_name="DUF936"
                     /note="Plant protein of unknown function (DUF936);
                     pfam06075"
                     /db_xref="CDD:461821"
     CDS             1..750
                     /gene="LOC107938707"
                     /coded_by="XM_016871940.2:1013..3265"
                     /db_xref="GeneID:107938707"
ORIGIN      
        1 manlvpgvll kllqhmntdv kvagehrssl lqvvsivpal aggelfpnqg fylkvsdssh
       61 atyvslpdeh ddlilsdkiq lgqfihvdrl esaspvpilr gvrpvpgrhp cvgspediva
      121 thslgflnng sesglgskpg ekvkspskvv lgsgyggekg ksvgsrsnvg skddgtdkkt
      181 kpgsltrtks llskpalsvd vkkdslgklk alssrsipss ptscyslpts fekfatrvkh
      241 qteikgmkkg spkvgslekt nsfngpsstg kkapviktlv hgielgakal rkswegnmev
      301 kgknhlnkpk atkhdtkges rstsaprkst sseklssree tkllastrsl keesksqvst
      361 rkavgngmss dhdkqnkpkt hvgnkcgept nngglgnlvk vqinskrltd gssvswgslp
      421 sslsrlgkdv mrhrdaaqta aiealqeaaa sesllrclsl ysdlttsake dnpqptvdqf
      481 ltlhaslnna rmvadslsrt ipvgsspese gtiseeavkv asdrrkyavs wvqaalatsm
      541 ssfsvftkeh hsnsshgsaf vksqkiipan qnmlilensa kngstktqvk arpvvgsklv
      601 aqgvlrkpgn gsalgpkapv qpppeiwtrg ngldevvdma dmlqmesqdw flgfvekfld
      661 advdtsalsd ngqiagmltq lksvndwlde issskdeget lphvsletvd rlrkkiydyl
      721 lthvesaaaa lgggsqsspp irtvetkark
//
LOCUS       XP_040943924             723 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943924
VERSION     XP_040943924.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087990.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..723
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=76780
     Region          4..698
                     /region_name="DUF936"
                     /note="Plant protein of unknown function (DUF936);
                     pfam06075"
                     /db_xref="CDD:461821"
     CDS             1..723
                     /gene="LOC107938707"
                     /coded_by="XM_041087990.1:984..3155"
                     /db_xref="GeneID:107938707"
ORIGIN      
        1 manlvpgvll kllqhmntdv kvagehrssl lqvvsivpal aggelfpnqg fylkvsdssh
       61 atyvslpdeh ddlilsdkiq lgqfihvdrl esaspvpilr gvrpvpgrhp cvgspediva
      121 thslgflnng sesglgskpg ekvkspskvv lgsgyggekg ksvgsrsnvg skddgtdkkt
      181 kpgsltrtks llskpalsvd vkkdslgklk alssrsipss ptscyslpts fekfatrvkh
      241 qteikgmkkg spkvgslekt nsfngpsstg kkapviktlv hgielgakal rkswegnmev
      301 kgknhlnkpk atkhdtkges rstsaprkst sseklssree tkllastrsl keesksqvst
      361 rkavgngmss dhdkqnkpkt hvgnkcgept nngglgnlvk vqinskrltd gssvswgslp
      421 sslsrlgkdv mrhrdaaqta aiealqeaaa sesllrclsl ysdlttsake dnpqptvdqf
      481 ltlhaslnna rmvadslsrt ipvgsspese gtiseeavkv asdrrkyavs wvqaalatsm
      541 ssfsvftkeh hsnsshgsaf vksqkiipan qnmlilensa kngstktqvk arpvvgsklv
      601 aqgvlrkpgn gsalgpkapv qpppeiwtrg ngldevvdma dmlqmesqdw flgfvekfld
      661 advdtsalsd ngqiagmltq lksvndwlde issskdeesa aaalgggsqs sppirtvetk
      721 ark
//
LOCUS       XP_016727442             423 aa            linear   PLN 06-AUG-2024
DEFINITION  calreticulin-3 [Gossypium hirsutum].
ACCESSION   XP_016727442
VERSION     XP_016727442.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871953.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="calreticulin-3"
                     /calculated_mol_wt=50128
     Region          31..342
                     /region_name="Calreticulin"
                     /note="Calreticulin family; pfam00262"
                     /db_xref="CDD:459737"
     CDS             1..423
                     /gene="LOC107938718"
                     /coded_by="XM_016871953.2:197..1468"
                     /db_xref="GeneID:107938718"
ORIGIN      
        1 mgklvpnrsf fllfflflhf llfdfalsei ffeerfedgw ksrwvlsdwk rsegkagtfk
       61 htagkwsgdp ddkgiqtynd akhyaisaki pefsnknrtl vvqysikieq diecgggyik
      121 llsgyvnqkk fggdtpysfm fgpdicgtqt kklhvilsyq gqnypirkdl qcetdklthf
      181 ytfilrpdas ysvlidnrer etgsmytdwd ilpprkikdv kakkpadwdd reyiedpndv
      241 kpegydkipa qipdpkakep ddwddeedgi wkppkipnpa ykgpwkrkki knpnykgkwk
      301 tpwidnpefe ddpdlyvlrp ikyvgievwq vkagsvfdni licddpqyar evvediwarn
      361 reaekeafee aekerraree eeakrareeg ekrrrerdhr hrdrrhrrrh dprdylddyh
      421 del
//
LOCUS       XP_016727416             327 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hydroxyacylglutathione hydrolase 2, chloroplastic isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016727416
VERSION     XP_016727416.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727416.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..327
                     /product="probable hydroxyacylglutathione hydrolase 2,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=35911
     Region          1..327
                     /region_name="PLN02398"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:215223"
     CDS             1..327
                     /gene="LOC107938699"
                     /coded_by="XM_016871927.2:160..1143"
                     /db_xref="GeneID:107938699"
ORIGIN      
        1 mqmlskassa masfpcsrvr sglcvwpglr qfcirkgley glrllsmplk tlrgasrslr
       61 vaefcsvtnv ssslqielvp clrdnyayll hdvdtgtvgv vdpsiampii dalsrknwnl
      121 tyilnthhhh dhtggnaelk arygakvigs gidkdripgi divlndgdkw mfaghevhvi
      181 etpghtrghi sfyfpssaai ftgdtlfsls cgklfegtpe qmlsslqrim slpddtniyc
      241 gheytlsnsk falsiepkne alqsyaahvt hlhnkglpti pttlkkekac npflrtmsse
      301 irqalnipad anaaeafgvi rhakdnf
//
LOCUS       XP_040943925             281 aa            linear   PLN 06-AUG-2024
DEFINITION  probable hydroxyacylglutathione hydrolase 2, chloroplastic isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040943925
VERSION     XP_040943925.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087991.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..281
                     /product="probable hydroxyacylglutathione hydrolase 2,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=30793
     Region          1..281
                     /region_name="PLN02398"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:215223"
     CDS             1..281
                     /gene="LOC107938699"
                     /coded_by="XM_041087991.1:273..1118"
                     /db_xref="GeneID:107938699"
ORIGIN      
        1 mplktlrgas rslrvaefcs vtnvssslqi elvpclrdny ayllhdvdtg tvgvvdpsia
       61 mpiidalsrk nwnltyilnt hhhhdhtggn aelkarygak vigsgidkdr ipgidivlnd
      121 gdkwmfaghe vhvietpght rghisfyfps saaiftgdtl fslscgklfe gtpeqmlssl
      181 qrimslpddt niycgheytl snskfalsie pknealqsya ahvthlhnkg lptipttlkk
      241 ekacnpflrt msseirqaln ipadanaaea fgvirhakdn f
//
LOCUS       XP_016727443             591 aa            linear   PLN 06-AUG-2024
DEFINITION  3beta-hydroxysteroid-dehydrogenase/decarboxylase [Gossypium
            hirsutum].
ACCESSION   XP_016727443
VERSION     XP_016727443.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871954.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727443.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..591
                     /product="3beta-hydroxysteroid-
                     dehydrogenase/decarboxylase"
                     /calculated_mol_wt=65659
     Region          20..366
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(25,27..28,30,50..52,103..105,142..144,172,176,
                     199..202)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(120,144,172,176)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          396..547
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..591
                     /gene="LOC107938719"
                     /coded_by="XM_016871954.2:120..1895"
                     /db_xref="GeneID:107938719"
ORIGIN      
        1 maekaaaydv arggwsetrt cvvlggrgfi grtlvnrllr lggwivrvad ssshsllldt
       61 ssgsdsllsd aissgqatfc hvdvldtsqi vkvttgadvv fymeptdldt hdfsncymii
      121 vqgaknvina cqeskvkrlv ynssadvvfd gsqdilngde sfaypgkfkd mtvdlkfqae
      181 glirlannig glqtcvlrps nvfgpgetqf vpllanlakf slakfitgsg gnmsdftyve
      241 nvahahicaa etmdswvvsv agkaffitnl epimfwefis lileglgyqr pfikvptwmv
      301 syvvilsqyi hdklgyrmyk ysvsphyivq lasrnrtfdc saaqkhlgys lvvsledgik
      361 stvasfshls knssfmrfgn fdeqskaekl lgsgivadvl lwrderrtfm cflilalafy
      421 wfffcgktft ssaaqllllv tailygygil asdicgfavq nipsscfeiq nsdvknsirs
      481 isymwnrvvc sirllakged wsrffkvmaf lylfkwivsy slavlvgivl vfaftaffiy
      541 eqyesviegl wavflfgime skgliistlp dyvtaflrnn ngshqekahf s
//
LOCUS       XP_040943927             591 aa            linear   PLN 06-AUG-2024
DEFINITION  3beta-hydroxysteroid-dehydrogenase/decarboxylase [Gossypium
            hirsutum].
ACCESSION   XP_040943927
VERSION     XP_040943927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087993.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..591
                     /product="3beta-hydroxysteroid-
                     dehydrogenase/decarboxylase"
                     /calculated_mol_wt=65659
     Region          20..366
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(25,27..28,30,50..52,103..105,142..144,172,176,
                     199..202)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(120,144,172,176)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          396..547
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..591
                     /gene="LOC107938719"
                     /coded_by="XM_041087993.1:120..1895"
                     /db_xref="GeneID:107938719"
ORIGIN      
        1 maekaaaydv arggwsetrt cvvlggrgfi grtlvnrllr lggwivrvad ssshsllldt
       61 ssgsdsllsd aissgqatfc hvdvldtsqi vkvttgadvv fymeptdldt hdfsncymii
      121 vqgaknvina cqeskvkrlv ynssadvvfd gsqdilngde sfaypgkfkd mtvdlkfqae
      181 glirlannig glqtcvlrps nvfgpgetqf vpllanlakf slakfitgsg gnmsdftyve
      241 nvahahicaa etmdswvvsv agkaffitnl epimfwefis lileglgyqr pfikvptwmv
      301 syvvilsqyi hdklgyrmyk ysvsphyivq lasrnrtfdc saaqkhlgys lvvsledgik
      361 stvasfshls knssfmrfgn fdeqskaekl lgsgivadvl lwrderrtfm cflilalafy
      421 wfffcgktft ssaaqllllv tailygygil asdicgfavq nipsscfeiq nsdvknsirs
      481 isymwnrvvc sirllakged wsrffkvmaf lylfkwivsy slavlvgivl vfaftaffiy
      541 eqyesviegl wavflfgime skgliistlp dyvtaflrnn ngshqekahf s
//
LOCUS       XP_016727434             965 aa            linear   PLN 06-AUG-2024
DEFINITION  flowering time control protein FPA isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727434
VERSION     XP_016727434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871945.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..965
                     /product="flowering time control protein FPA isoform X1"
                     /calculated_mol_wt=105077
     Region          23..433
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          507..626
                     /region_name="SPOC_SF"
                     /note="SPOC (Spen paralog and ortholog C-terminal) domain
                     superfamily; cl45902"
                     /db_xref="CDD:459247"
     CDS             1..965
                     /gene="LOC107938713"
                     /coded_by="XM_016871945.2:147..3044"
                     /db_xref="GeneID:107938713"
ORIGIN      
        1 mfppmkqqni gkqsevsdtp ssnlwvgnls getvdsdlmd lfckfgelds vatyssrsfa
       61 fvffkrveda kaakealrga tlhgnqikie farpakpcks lwvggisqti skeeleeefs
      121 kfgkiedfkf lrdrntafve yfrmedasqa mrsmngkrig gaqirvdflr shpsrreqwp
      181 nshdlrdgpf tgrmgpsdsh lakrphsqiv grkgdsqptn vlwvgfppsv qideqmlhna
      241 milfgeieni ksfpsrhyaf vefrsveear rakeglqgrl fndpritimf ssselapgkd
      301 ysglysgikg pglamllsdh pfrssqmdmf gqnhtlppnt vtgplatsgi lgsnvpvrpf
      361 nhqgsydpll sgpeyndlss hhnmldadlk nltgpnwrks spslpsaqgv rppmrqtsgs
      421 wdvydvnqfq rdakrlriea slpiddasfp lrkmddlgpg sdhfgpvigg gasspflnvq
      481 gkgrlspvpg klpaggpgra hpdndyiwrg iiakggtpvc harcvpigkg letelpevvn
      541 csartgldml akhyceaigf divfflpdse ddfasytefl rylgsksrag vakfddgttl
      601 flvppseflt kvlkvtgper lygvilklpp qvpstaplqs hppslsqhdy slphlkeeqa
      661 lqreygrvph eesipsarpl aqttvqnqpp snaaaipqtg vsltpdliat lasflptvsq
      721 stavggvqpp lvtsttqpsf pqgiapkgap aqnwnqeqqa ydpaassfqq fnppaqlppa
      781 qhyssisntp ihsaqvahgs tqyldsaagl pqqtasssrp ltnfsipsqr ehvsapfsqq
      841 yhpeapsntq ngygmmhgad tsglygapaf qqpnnpdvls nqvnganvfq pqnlmqgdkq
      901 nlelpshgqq lqsvvpgagq gtsdvevdkn qryqstlqfa aslllqiqqq qqtntpggqg
      961 tgsql
//
LOCUS       XP_016727435             940 aa            linear   PLN 06-AUG-2024
DEFINITION  flowering time control protein FPA isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727435
VERSION     XP_016727435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871946.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..940
                     /product="flowering time control protein FPA isoform X2"
                     /calculated_mol_wt=102358
     Region          23..433
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          507..626
                     /region_name="SPOC_SF"
                     /note="SPOC (Spen paralog and ortholog C-terminal) domain
                     superfamily; cl45902"
                     /db_xref="CDD:459247"
     CDS             1..940
                     /gene="LOC107938713"
                     /coded_by="XM_016871946.2:147..2969"
                     /db_xref="GeneID:107938713"
ORIGIN      
        1 mfppmkqqni gkqsevsdtp ssnlwvgnls getvdsdlmd lfckfgelds vatyssrsfa
       61 fvffkrveda kaakealrga tlhgnqikie farpakpcks lwvggisqti skeeleeefs
      121 kfgkiedfkf lrdrntafve yfrmedasqa mrsmngkrig gaqirvdflr shpsrreqwp
      181 nshdlrdgpf tgrmgpsdsh lakrphsqiv grkgdsqptn vlwvgfppsv qideqmlhna
      241 milfgeieni ksfpsrhyaf vefrsveear rakeglqgrl fndpritimf ssselapgkd
      301 ysglysgikg pglamllsdh pfrssqmdmf gqnhtlppnt vtgplatsgi lgsnvpvrpf
      361 nhqgsydpll sgpeyndlss hhnmldadlk nltgpnwrks spslpsaqgv rppmrqtsgs
      421 wdvydvnqfq rdakrlriea slpiddasfp lrkmddlgpg sdhfgpvigg gasspflnvq
      481 gkgrlspvpg klpaggpgra hpdndyiwrg iiakggtpvc harcvpigkg letelpevvn
      541 csartgldml akhyceaigf divfflpdse ddfasytefl rylgsksrag vakfddgttl
      601 flvppseflt kvlkvtgper lygvilklpp qeeqalqrey grvpheesip sarplaqttv
      661 qnqppsnaaa ipqtgvsltp dliatlasfl ptvsqstavg gvqpplvtst tqpsfpqgia
      721 pkgapaqnwn qeqqaydpaa ssfqqfnppa qlppaqhyss isntpihsaq vahgstqyld
      781 saaglpqqta sssrpltnfs ipsqrehvsa pfsqqyhpea psntqngygm mhgadtsgly
      841 gapafqqpnn pdvlsnqvng anvfqpqnlm qgdkqnlelp shgqqlqsvv pgagqgtsdv
      901 evdknqryqs tlqfaaslll qiqqqqqtnt pggqgtgsql
//
LOCUS       XP_016727436             920 aa            linear   PLN 06-AUG-2024
DEFINITION  flowering time control protein FPA isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016727436
VERSION     XP_016727436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871947.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..920
                     /product="flowering time control protein FPA isoform X3"
                     /calculated_mol_wt=100184
     Region          23..388
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          462..581
                     /region_name="SPOC_SF"
                     /note="SPOC (Spen paralog and ortholog C-terminal) domain
                     superfamily; cl45902"
                     /db_xref="CDD:459247"
     CDS             1..920
                     /gene="LOC107938713"
                     /coded_by="XM_016871947.2:147..2909"
                     /db_xref="GeneID:107938713"
ORIGIN      
        1 mfppmkqqni gkqsevsdtp ssnlwvgnls getvdsdlmd lfckfgelds vatyssrsfa
       61 fvffkrveda kaakealrga tlhgnqikie farpakpcks lwvggisqti skeeleeefs
      121 kfgkiedfkf lrdrntafve yfrmedasqa mrsmngkrig gaqirvdflr shpsrreqwp
      181 nshdlrdgpf tgrmgpsdsh lakrphsqiv grkgdsqptn vlwvgfppsv qideqmlhna
      241 milfgeieni ksfpsrhyaf vefrsveear rakeglqgrl fndpritimf ssselapgkd
      301 ysglysgikg pglamllsdh pfrssqmdmf gqnhtlppnt vtgplatsgi lgsnvpvrpf
      361 nhqgvrppmr qtsgswdvyd vnqfqrdakr lrieaslpid dasfplrkmd dlgpgsdhfg
      421 pvigggassp flnvqgkgrl spvpgklpag gpgrahpdnd yiwrgiiakg gtpvcharcv
      481 pigkgletel pevvncsart gldmlakhyc eaigfdivff lpdseddfas yteflrylgs
      541 ksragvakfd dgttlflvpp sefltkvlkv tgperlygvi lklppqvpst aplqshppsl
      601 sqhdyslphl keeqalqrey grvpheesip sarplaqttv qnqppsnaaa ipqtgvsltp
      661 dliatlasfl ptvsqstavg gvqpplvtst tqpsfpqgia pkgapaqnwn qeqqaydpaa
      721 ssfqqfnppa qlppaqhyss isntpihsaq vahgstqyld saaglpqqta sssrpltnfs
      781 ipsqrehvsa pfsqqyhpea psntqngygm mhgadtsgly gapafqqpnn pdvlsnqvng
      841 anvfqpqnlm qgdkqnlelp shgqqlqsvv pgagqgtsdv evdknqryqs tlqfaaslll
      901 qiqqqqqtnt pggqgtgsql
//
LOCUS       XP_016727446             445 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKIP16 [Gossypium hirsutum].
ACCESSION   XP_016727446
VERSION     XP_016727446.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871957.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..445
                     /product="F-box protein SKIP16"
                     /calculated_mol_wt=50276
     Region          8..49
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          90..>188
                     /region_name="SMI1"
                     /note="Cell wall assembly regulator SMI1 (Killer
                     toxin-resistance protein 4) [Cell wall/membrane/envelope
                     biogenesis]; COG4282"
                     /db_xref="CDD:443423"
     Region          327..418
                     /region_name="DUF525"
                     /note="ApaG domain; pfam04379"
                     /db_xref="CDD:461283"
     CDS             1..445
                     /gene="LOC107938721"
                     /coded_by="XM_016871957.2:203..1540"
                     /db_xref="GeneID:107938721"
ORIGIN      
        1 mgkeldglgf lplhiilskl spsdiikvsc ankrlrdsas deslwaqicy qelqlstpqd
       61 dhgnplpcfm layqlwreaf smypwplvkr vkrcwdklkk wfnnnfpeae atlrrgaaes
      121 kieqlqtllk vklplptrll yrfhdgqelp ekrnpktasg swlgiiggys fynhsvnvyl
      181 lplnqviakt ryvirhlgfs srskcivmas sftfsrkvff lnctngqlfv gtrkpltdge
      241 mipcvpntli rsvhdlygee qqdamllwle ehgrrlengi ikvrkegddr sinlfpevpp
      301 lcvttvtngv qvrasavfvp efadlvdeae kftfaysirm sllpegciin gmtfvscqln
      361 rrhwiiradg evvssvddea vigeypllhp gegefvyqsc aplpspsgsi eghftfvpgr
      421 ladprggpfe vqvarfplem pdyvf
//
LOCUS       XP_016727438             386 aa            linear   PLN 06-AUG-2024
DEFINITION  probable transcription factor PosF21 [Gossypium hirsutum].
ACCESSION   XP_016727438
VERSION     XP_016727438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871949.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..386
                     /product="probable transcription factor PosF21"
                     /calculated_mol_wt=41787
     Region          208..257
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          208..257
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(211..212,214..216,218..223,225..227)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(226,229..230,233..234,236..237,240..241,243..244,
                     247..248,250..251,254..255,257)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          <230..>296
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     CDS             1..386
                     /gene="LOC107938716"
                     /coded_by="XM_016871949.2:506..1666"
                     /db_xref="GeneID:107938716"
ORIGIN      
        1 mekdkspglp ppsgrytgfa avgnvlnstg cfgqssdanr fsqdiskmpd nppknlghrr
       61 ahseiltlpd disfdsdlgv vgaadgpsys ddtgedmfsm fidmdkfnss satstfqvge
      121 ssapaaapat ahmaaaawtg mngenqsvtv gssekprvrh qhsqsmdgst sikpemlmsg
      181 aeevspaeak kalsatklae laiidpkrak riwanrqsaa rskerkmryi aelerkvqtl
      241 qteatslsaq lsllqrdtgt ltaennelkl rlttmeqqvh lqdalnealk deiqhlkvlt
      301 gqsipnggpm mnyasygtnq qyypnnqamh tlltaqqfqq lqiqsqkqph pfqlqhqtgd
      361 mgvrgpvptp nhkdassdvs ltatkd
//
LOCUS       XP_016727417             269 aa            linear   PLN 06-AUG-2024
DEFINITION  RHOMBOID-like protein 13 [Gossypium hirsutum].
ACCESSION   XP_016727417
VERSION     XP_016727417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="RHOMBOID-like protein 13"
                     /calculated_mol_wt=30089
     Region          49..199
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..269
                     /gene="LOC107938700"
                     /coded_by="XM_016871928.2:465..1274"
                     /db_xref="GeneID:107938700"
ORIGIN      
        1 mgkplfyevm ekpatsciig icttiwfyiq kknigyqhvg vsyetaiegh ywrlitsafs
       61 hisvihlvfn msalwslgiv eqldylglgi ayylqytlvl vvlsgllvlg myhiliqrfk
      121 ieyfrrvtav gyscvvfgwm tilsvkqpss kldlfgfisl pisfapfesl iftsiiipqa
      181 sflghlsgii vgyaiawgli hgmtnywavs mlgwivlvfv fslkrsgayd fnfleiesvt
      241 dpslpsvrfm gnsrtlqmss vplggieiv
//
LOCUS       XP_016727432             250 aa            linear   PLN 06-AUG-2024
DEFINITION  protein At-4/1 [Gossypium hirsutum].
ACCESSION   XP_016727432
VERSION     XP_016727432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..250
                     /product="protein At-4/1"
                     /calculated_mol_wt=29214
     Region          <67..>241
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..250
                     /gene="LOC107938711"
                     /coded_by="XM_016871943.2:23..775"
                     /db_xref="GeneID:107938711"
ORIGIN      
        1 maatsdlymd sllsgfdqiy edfkrrteei qflksnwnge ikrgealkit cdslkqdnar
       61 ltklytesln nfaeqlenha ecqrlkeelw rrkdeytske eehrkamell kkdhakevad
      121 leakvrglll ekatneatii qlrkdlathk shaqvlskkl dqlqsdeesk ylleiwdlkd
      181 cllieqeekn eltkklqeae kellisrtkl geqqqdsasn qqvetlklki mklrkeneil
      241 krklssmeac
//
LOCUS       XP_016727412             470 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA polymerase II C-terminal domain phosphatase-like 4 [Gossypium
            hirsutum].
ACCESSION   XP_016727412
VERSION     XP_016727412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..470
                     /product="RNA polymerase II C-terminal domain
                     phosphatase-like 4"
                     /calculated_mol_wt=53521
     Region          155..310
                     /region_name="FCP1_euk"
                     /note="FCP1-like phosphatase, phosphatase domain;
                     TIGR02250"
                     /db_xref="CDD:131304"
     Site            order(166..170,174..175,234..237,241,272,288..289,
                     291..293)
                     /site_type="active"
                     /db_xref="CDD:319823"
     Region          364..459
                     /region_name="BRCT_CTDP1"
                     /note="BRCT domain of RNA polymerase II subunit A
                     C-terminal domain phosphatase (CTDP1) and similar
                     proteins; cd17729"
                     /db_xref="CDD:349361"
     CDS             1..470
                     /gene="LOC107938696"
                     /coded_by="XM_016871923.2:249..1661"
                     /db_xref="GeneID:107938696"
ORIGIN      
        1 msfatdspvh ssssddfaal idaelevgss gsspdeqdne eeevdadsdd ddsddeedds
       61 nddlndhrnk rckteklddl egpqgstsqg lieeklevsl nkdtcthpgs fgqmcilcgq
      121 rvddesgvtf gyihkglrlg ndeivrlrst dmknllrhkk lylvldldht llnstqlnhl
      181 taeeeylkgq sdslqdvskg slfmlefmhm mtklrpfvrt flkeasemfe myiytmgdrp
      241 yalemaklld pkkeyfngrv isrddgtqkh qkgldvvlgq dsavvilddt enawtkhkdn
      301 lilmeryhff asscrqfgfd crslsqlksd esepdgalas ilkilrqihh iffdeldsdl
      361 asrdvrqvlk tvrkellkdc kivfsrvfpt kfqpenhllw kmaeqlgatc stetdssvth
      421 vvsmdagtek srwavkenkf lvhprwieaa nffwqkqpee kfpvsqtknq
//
LOCUS       XP_016727447             269 aa            linear   PLN 06-AUG-2024
DEFINITION  protein YIF1B [Gossypium hirsutum].
ACCESSION   XP_016727447
VERSION     XP_016727447.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871958.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="protein YIF1B"
                     /calculated_mol_wt=30234
     Region          42..261
                     /region_name="YIF1"
                     /note="pfam03878"
                     /db_xref="CDD:461081"
     CDS             1..269
                     /gene="LOC107938722"
                     /coded_by="XM_016871958.2:169..978"
                     /db_xref="GeneID:107938722"
ORIGIN      
        1 mynnlgaqpg vprppvnpqp apfgnafyga gsglirgglg aygekilgss seyvqsnisr
       61 yfsdpqyyfq vndqyvrnkl kvvllpflhr ghwtritepv ggrlsykppi fdinapdlyi
      121 pfmafgtyvv laglslglqg kfspevlnwl fvkglfgwfl qvmllkvtll slgsgeapll
      181 dimayagytf tglclavlgr ivwrysyyfl mpwtclcmgv flvktmkrvl faevrsydss
      241 khhylllfia lvqfplftwl gnisvnwlf
//
LOCUS       XP_016727420             612 aa            linear   PLN 06-AUG-2024
DEFINITION  acetolactate synthase 2, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016727420
VERSION     XP_016727420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871931.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..612
                     /product="acetolactate synthase 2, chloroplastic"
                     /calculated_mol_wt=66848
     Region          27..612
                     /region_name="PLN02470"
                     /note="acetolactate synthase"
                     /db_xref="CDD:215261"
     CDS             1..612
                     /gene="LOC107938702"
                     /coded_by="XM_016871931.2:45..1883"
                     /db_xref="GeneID:107938702"
ORIGIN      
        1 mkmplrkpss tmaatakevt ptispssdlv sryapeesrk gadiiveale regvkhvfay
       61 pgeasveihq altrsnvirn vlprheqggv faaegyarss glpgvciats gpgatnlvsg
      121 ladamidsip lvaitgqvpr rmigtdafqe tpivevtrsi tkhnylvldi ddiprivsea
      181 fflatsgrpg pvlidvpkdi qeqlavpnwn qpfrlsgyms rlpkepseah leqivrlife
      241 skkpvlyvgg gclnsgeelk rfaeltgipv tctlmglgsf ptsdplslqm lgmygtvyan
      301 yavdksdlll sfgvrfddhv tgkleafasr akivhidvds aeigknkqph vsvhsdvkla
      361 lkginrtles kgakleldyt awweelieqk vkypltyktf geaippqyav qllyeltdgn
      421 viistgvgqh qmwaaqfyky krprqwltsg gfgamgfglp aaigaavanp gavvvdidgd
      481 gsfmmnvqel atirvenlpi killlnnqhl gmvvqwedrf ckanradsyl gnpsnksevf
      541 pnmlkfaeac eipaaritkk edlreaickm letsgpnfld viiphqehvl piiptggtfk
      601 dvitegdgrt ky
//
LOCUS       XP_016727433             659 aa            linear   PLN 06-AUG-2024
DEFINITION  acetolactate synthase 2, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016727433
VERSION     XP_016727433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871944.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..659
                     /product="acetolactate synthase 2, chloroplastic"
                     /calculated_mol_wt=71309
     Region          75..659
                     /region_name="PLN02470"
                     /note="acetolactate synthase"
                     /db_xref="CDD:215261"
     CDS             1..659
                     /gene="LOC107938712"
                     /coded_by="XM_016871944.2:44..2023"
                     /db_xref="GeneID:107938712"
ORIGIN      
        1 maattantsl lkpsplasss kssipisksv lhfrtiprkl tpprslsvss slsqsnstpg
       61 stassvaptk apthdfisry apdeprkgad ilvealereg vkdvfaypgg asleihqalt
      121 rsklirnvlp rheqggvfaa egyarssglp gvciatsgpg atnlvsglad amidsiplva
      181 itgqvprrmi gtdafqetpi vevtrsitkh nylvldiddi privseaffl atsgrpgpvl
      241 idvpkdiqqq lavpnwnqpl rlsgymsrlp kepneslleq ivrlvfeskk pvlyvgggcl
      301 nsneelkrfv eltgipvttt lmglgsfpsp dplslqmlgm hgtvyanyav dnsdlllafg
      361 vrfddrvtgk leafasraki vhididsaei gknkqphvsv csdvklalkg inkileskga
      421 kvkldysawr nelneqkvky plnyktfgea ippqyaievl deltdgnaii stgvgqhqmw
      481 aaqfykykkp rqwltsgglg amgfglpaai gaavanpgsv vvdidgdgsf mmnvqelati
      541 rvenlpikil llnnqhlgmv vqwedrfyka nrahtylgnp sdesdifpnm lkfaeacgip
      601 aarvtkkedl rqaiqkmlet pgpylldviv phqehvlpmi pgggafkdvi tdgdgrtky
//
LOCUS       XP_016727418             261 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR1-RELATED SEQUENCE 12 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727418
VERSION     XP_016727418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..261
                     /product="protein FAR1-RELATED SEQUENCE 12 isoform X1"
                     /calculated_mol_wt=29944
     Region          103..190
                     /region_name="FAR1"
                     /note="FAR1 DNA-binding domain; pfam03101"
                     /db_xref="CDD:335217"
     CDS             1..261
                     /gene="LOC107938701"
                     /coded_by="XM_016871929.2:168..953"
                     /db_xref="GeneID:107938701"
ORIGIN      
        1 mreslnfefl lgyiyiyfft vefwvhgdvn ggimlnpvqa easssmdndn etgenpvegi
       61 fqpglnekld rtslqrddip eivladepyv gqefeseasa hafynayatr vgfiirvskl
      121 srsrhdgsai gralvcnkeg frmpdkreki mrrraetrvg cramilvrkv ssgkwvvtkf
      181 vkehthpltp gkgrtdciyd qypnehdkir elthqlaiek krsatykrql elifeqidec
      241 nkslskkiqh ivdsareien k
//
LOCUS       XP_016727419             241 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR1-RELATED SEQUENCE 12 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727419
VERSION     XP_016727419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871930.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..241
                     /product="protein FAR1-RELATED SEQUENCE 12 isoform X2"
                     /calculated_mol_wt=27427
     Region          83..170
                     /region_name="FAR1"
                     /note="FAR1 DNA-binding domain; pfam03101"
                     /db_xref="CDD:335217"
     CDS             1..241
                     /gene="LOC107938701"
                     /coded_by="XM_016871930.2:148..873"
                     /db_xref="GeneID:107938701"
ORIGIN      
        1 mefwvhgdvn ggimlnpvqa easssmdndn etgenpvegi fqpglnekld rtslqrddip
       61 eivladepyv gqefeseasa hafynayatr vgfiirvskl srsrhdgsai gralvcnkeg
      121 frmpdkreki mrrraetrvg cramilvrkv ssgkwvvtkf vkehthpltp gkgrtdciyd
      181 qypnehdkir elthqlaiek krsatykrql elifeqidec nkslskkiqh ivdsareien
      241 k
//
LOCUS       XP_016727445             354 aa            linear   PLN 06-AUG-2024
DEFINITION  probable tRNA N6-adenosine threonylcarbamoyltransferase [Gossypium
            hirsutum].
ACCESSION   XP_016727445
VERSION     XP_016727445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871956.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..354
                     /product="probable tRNA N6-adenosine
                     threonylcarbamoyltransferase"
                     /calculated_mol_wt=38593
     Region          6..314
                     /region_name="ASKHA_NBD_OSGEP_like_euk"
                     /note="nucleotide-binding domain (NBD) of
                     O-sialoglycoprotein endopeptidase (OSGEP) and similar
                     proteins mainly from eukaryotes; cd24132"
                     /db_xref="CDD:466982"
     CDS             1..354
                     /gene="LOC107938720"
                     /coded_by="XM_016871956.2:247..1311"
                     /db_xref="GeneID:107938720"
ORIGIN      
        1 mkkkmiaigf egsankigig vvtldgtils nprhtyitpp gqgflpreta qhhlqhvlpl
       61 vksalktaei tpdeidcicy tkgpgmgapl qvsaivvrvl sllwkkpiva vnhcvahiem
      121 grivtgaddp vvlyvsggnt qviaysegry rifgetidia vgncldrfar vltlsndpsp
      181 gynieqlakk gekfidlpyv vkgmdvsfsg ilsyieatae eklknnectp adlcyslqet
      241 lfamlveite ramahcdskd vlivggvgcn erlqemmrim cserggrlfa tddrycidng
      301 amiahtglla fahgystple estftqrfrt devhaiwrek qesgdlsglp dggi
//
LOCUS       XP_016727444             354 aa            linear   PLN 06-AUG-2024
DEFINITION  probable tRNA N6-adenosine threonylcarbamoyltransferase [Gossypium
            hirsutum].
ACCESSION   XP_016727444
VERSION     XP_016727444.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..354
                     /product="probable tRNA N6-adenosine
                     threonylcarbamoyltransferase"
                     /calculated_mol_wt=38593
     Region          6..314
                     /region_name="ASKHA_NBD_OSGEP_like_euk"
                     /note="nucleotide-binding domain (NBD) of
                     O-sialoglycoprotein endopeptidase (OSGEP) and similar
                     proteins mainly from eukaryotes; cd24132"
                     /db_xref="CDD:466982"
     CDS             1..354
                     /gene="LOC107938720"
                     /coded_by="XM_016871955.2:217..1281"
                     /db_xref="GeneID:107938720"
ORIGIN      
        1 mkkkmiaigf egsankigig vvtldgtils nprhtyitpp gqgflpreta qhhlqhvlpl
       61 vksalktaei tpdeidcicy tkgpgmgapl qvsaivvrvl sllwkkpiva vnhcvahiem
      121 grivtgaddp vvlyvsggnt qviaysegry rifgetidia vgncldrfar vltlsndpsp
      181 gynieqlakk gekfidlpyv vkgmdvsfsg ilsyieatae eklknnectp adlcyslqet
      241 lfamlveite ramahcdskd vlivggvgcn erlqemmrim cserggrlfa tddrycidng
      301 amiahtglla fahgystple estftqrfrt devhaiwrek qesgdlsglp dggi
//
LOCUS       XP_016727415             150 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016727415
VERSION     XP_016727415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="calmodulin-like protein 7"
                     /calculated_mol_wt=16777
     Region          5..141
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..150
                     /gene="LOC107938698"
                     /coded_by="XM_016871926.2:220..672"
                     /db_xref="GeneID:107938698"
ORIGIN      
        1 mdetelkrvf qmfdkngdgk itkkdliesl eslgifipeg dliqmiekyd vngdncidyd
       61 efgelyqsim sdkdeeedik eafkvfdqng dgyisvdelg silvslglkq gekaedckrm
      121 imqvdadsdg rvnfsefkqm mkggglsalt
//
LOCUS       XP_016727439             493 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 92A1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727439
VERSION     XP_016727439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871950.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..493
                     /product="UDP-glycosyltransferase 92A1 isoform X1"
                     /calculated_mol_wt=54799
     Region          8..492
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(19..20,22,174,196..197,201,243,298,380,382,384..385,
                     388)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,298,380,382,384..385)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..493
                     /gene="LOC107938717"
                     /coded_by="XM_016871950.2:290..1771"
                     /db_xref="GeneID:107938717"
ORIGIN      
        1 mgssndyihi vmvpfmahgh lipflalakq ihhqtgfnia iantplniqy lrstlrgnpi
       61 pgihflqlqf nssdhglppn tentenlsld ligkffassa ylktpfynll kdivkkqctp
      121 pvcviadvff gwavdvansl ntinitfstg gaygtlayvs lwtnlphrrt dnaefnvpgf
      181 pdrckfhvsq lhdflrkadg tdlwskfmqp qilsslksfg wlcntveeie pygldllrky
      241 ikspvwsigp llpkswlins sasgrqhagk epgtspekcv qwldmhsdds vlyisfgsqn
      301 tispsnmmel atglekagkp fawvirpplg fdlkaefkpe wlpegfedrm srnnqgllvk
      361 nwapqleils hrstgaflsh cgwnstmesl sqgvkiigwp lvaeqaynsk mlveemgvav
      421 eltrgvrssi ssdkvkevie mvmgkegkgr dmkrkaqeia ehimaavkde gnekgssika
      481 lddfvstitt ark
//
LOCUS       XP_016727440             415 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 92A1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016727440
VERSION     XP_016727440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871951.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..415
                     /product="UDP-glycosyltransferase 92A1 isoform X2"
                     /calculated_mol_wt=46196
     Region          8..414
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(19..20,22,132,135..136,140,220,302,304,306..307,310)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(19,220,302,304,306..307)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            20
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..415
                     /gene="LOC107938717"
                     /coded_by="XM_016871951.2:202..1449"
                     /db_xref="GeneID:107938717"
ORIGIN      
        1 mgssndyihi vmvpfmahgh lipflalakq ihhqtgfnia iantplniqy lrstlrgnpi
       61 pgihflqlqf nssdhglppn tentenlsld lidnaefnvp gfpdrckfhv sqlhdflrka
      121 dgtdlwskfm qpqilsslks fgwlcntvee iepygldllr kyikspvwsi gpllpkswli
      181 nssasgrqha gkepgtspek cvqwldmhsd dsvlyisfgs qntispsnmm elatglekag
      241 kpfawvirpp lgfdlkaefk pewlpegfed rmsrnnqgll vknwapqlei lshrstgafl
      301 shcgwnstme slsqgvkiig wplvaeqayn skmlveemgv aveltrgvrs sissdkvkev
      361 iemvmgkegk grdmkrkaqe iaehimaavk degnekgssi kalddfvsti ttark
//
LOCUS       XP_016727426             669 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727426
VERSION     XP_016727426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871937.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..669
                     /product="uncharacterized protein"
                     /calculated_mol_wt=76731
     Region          241..283
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          293..343
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          384..427
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          492..534
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          547..594
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..669
                     /gene="LOC107938704"
                     /coded_by="XM_016871937.2:98..2107"
                     /db_xref="GeneID:107938704"
ORIGIN      
        1 meeprnyghq hpllllnedq livadcsmcg vkvstpcfsc aqdcgfylhk vcaeppleln
       61 hpfhphhpll lmqnapyssg lyicnlchlk gnkfvyhcsc dldfhikcal ftfnisenhl
      121 kelehvalqh plicpksgdr eledgakcfl cceplanyty fsldcgfnlh kkcaklsfkl
      181 nhvchrkhpl vlqfnteqfs ckicgetsgk glgfiygcsp ckfaahlkcv saaldlvigd
      241 krhehpfslf prgssficda cgiegsyasy icctcnimvh kkctslprii kskwhdhnlf
      301 hkyflriedf rvldcimcny evstdygsyy csecdvilhv kcamkdkdsy eivenedevp
      361 nessiivier nnageatkvt hfmhmhnlml gpfvggyens cegcmlpitd pfyyctecvf
      421 flhkacaelp kmknvwrhrc replalisyk girceqcrqi sntfayecse cegqiclrcv
      481 ialtpgartc lkhehplffy rdykgqcnac gfttrwagga fcckdcnfvl hlqcfslpit
      541 vrhkcdehll sltnhddnsy senhycdice ksrfpdrwfy hcakcdtsah vdcvlekypf
      601 fklgsiyeet ghphpltivk kkynypdcde cskpcedval ecseleckyi vhwncvapyp
      661 lkwpsrwdm
//
LOCUS       XP_016727421             736 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727421
VERSION     XP_016727421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..736
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=81805
     Region          324..536
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(376..377,379..387)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            471..475
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..736
                     /gene="LOC107938703"
                     /coded_by="XM_016871932.2:348..2558"
                     /db_xref="GeneID:107938703"
ORIGIN      
        1 mwikslrlis iligllnllv vvlggivvai sfpgcrphkv lpvivvsffs avrigtmigl
       61 giaqeataki itqnssetqv ldavirqhrr vtykawlwws rfamvvtvlq ilgafylivn
      121 vatyvsedah fstkcfvggf plsrawkrkv mlsflvtacc iaflqccags dvlrwrfyya
      181 sqddawkahy qeifdhgire alccmgriey ltvieddevy svakllgdlv ayrasgtghl
      241 elltglallq khgqasksse hfveapvehl qaalafhkfa eaaytgplld fgrnpfvfpc
      301 vwlhrqgvlt pwtrkrrptl dgdnwlrgha aafinflnlp sevlrrgrvr qkkceaayfi
      361 vvlhelrtvv iairgtetpe dliidglgre rsltevdldg linssfihps vkkrvkssfp
      421 hfghsgivet ardlytqieg ypgdesqsgg fvssllgvgc ecegynlrvv ghslggsiaa
      481 llgirlygkf pnlhvysygp lpcvdsvvad acsdfitsii hdnefstrls vgsilrlras
      541 aitalsentq adttlilrla rqflyasknn sielepepak sstrsskese dkeqesclyd
      601 gndgrqnhvd iestdivnpf asvlnqsddp isqfmqtvsr senssatdpt emylpgllih
      661 ivpqsqnlni plwkswrihd dhqkykaffa nrddlkdiiv spnmffdhlp wrcnkamqkv
      721 veagntagsp gvshiv
//
LOCUS       XP_016727423             592 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727423
VERSION     XP_016727423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..592
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=65484
     Region          324..536
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(376..377,379..387)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            471..475
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..592
                     /gene="LOC107938703"
                     /coded_by="XM_016871934.2:356..2134"
                     /db_xref="GeneID:107938703"
ORIGIN      
        1 mwikslrlis iligllnllv vvlggivvai sfpgcrphkv lpvivvsffs avrigtmigl
       61 giaqeataki itqnssetqv ldavirqhrr vtykawlwws rfamvvtvlq ilgafylivn
      121 vatyvsedah fstkcfvggf plsrawkrkv mlsflvtacc iaflqccags dvlrwrfyya
      181 sqddawkahy qeifdhgire alccmgriey ltvieddevy svakllgdlv ayrasgtghl
      241 elltglallq khgqasksse hfveapvehl qaalafhkfa eaaytgplld fgrnpfvfpc
      301 vwlhrqgvlt pwtrkrrptl dgdnwlrgha aafinflnlp sevlrrgrvr qkkceaayfi
      361 vvlhelrtvv iairgtetpe dliidglgre rsltevdldg linssfihps vkkrvkssfp
      421 hfghsgivet ardlytqieg ypgdesqsgg fvssllgvgc ecegynlrvv ghslggsiaa
      481 llgirlygkf pnlhvysygp lpcvdsvvad acsdfitsii hdnefstrls vgsilrlras
      541 aitalsentq adttlilrla rqflyasknn sielepepak sstrsskgev fe
//
LOCUS       XP_016727424             586 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727424
VERSION     XP_016727424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..586
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=65124
     Region          174..386
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(226..227,229..237)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            321..325
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..586
                     /gene="LOC107938703"
                     /coded_by="XM_016871935.2:151..1911"
                     /db_xref="GeneID:107938703"
ORIGIN      
        1 mlsflvtacc iaflqccags dvlrwrfyya sqddawkahy qeifdhgire alccmgriey
       61 ltvieddevy svakllgdlv ayrasgtghl elltglallq khgqasksse hfveapvehl
      121 qaalafhkfa eaaytgplld fgrnpfvfpc vwlhrqgvlt pwtrkrrptl dgdnwlrgha
      181 aafinflnlp sevlrrgrvr qkkceaayfi vvlhelrtvv iairgtetpe dliidglgre
      241 rsltevdldg linssfihps vkkrvkssfp hfghsgivet ardlytqieg ypgdesqsgg
      301 fvssllgvgc ecegynlrvv ghslggsiaa llgirlygkf pnlhvysygp lpcvdsvvad
      361 acsdfitsii hdnefstrls vgsilrlras aitalsentq adttlilrla rqflyasknn
      421 sielepepak sstrsskese dkeqesclyd gndgrqnhvd iestdivnpf asvlnqsddp
      481 isqfmqtvsr senssatdpt emylpgllih ivpqsqnlni plwkswrihd dhqkykaffa
      541 nrddlkdiiv spnmffdhlp wrcnkamqkv veagntagsp gvshiv
//
LOCUS       XP_016727425             559 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016727425
VERSION     XP_016727425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016871936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..559
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=62083
     Region          147..359
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(199..200,202..210)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            294..298
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..559
                     /gene="LOC107938703"
                     /coded_by="XM_016871936.2:33..1712"
                     /db_xref="GeneID:107938703"
ORIGIN      
        1 mhpkmmhgkl iikrylimef vklcavwdvl stcrtviedd evysvakllg dlvayrasgt
       61 ghlelltgla llqkhgqask ssehfveapv ehlqaalafh kfaeaaytgp lldfgrnpfv
      121 fpcvwlhrqg vltpwtrkrr ptldgdnwlr ghaaafinfl nlpsevlrrg rvrqkkceaa
      181 yfivvlhelr tvviairgte tpedliidgl grersltevd ldglinssfi hpsvkkrvks
      241 sfphfghsgi vetardlytq iegypgdesq sggfvssllg vgcecegynl rvvghslggs
      301 iaallgirly gkfpnlhvys ygplpcvdsv vadacsdfit siihdnefst rlsvgsilrl
      361 rasaitalse ntqadttlil rlarqflyas knnsielepe paksstrssk esedkeqesc
      421 lydgndgrqn hvdiestdiv npfasvlnqs ddpisqfmqt vsrsenssat dptemylpgl
      481 lihivpqsqn lniplwkswr ihddhqkyka ffanrddlkd iivspnmffd hlpwrcnkam
      541 qkvveagnta gspgvshiv
//
LOCUS       XP_040943930             195 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943930
VERSION     XP_040943930.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087996.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21968
     Region          69..96
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     CDS             1..195
                     /gene="LOC121214410"
                     /coded_by="XM_041087996.1:489..1076"
                     /db_xref="GeneID:121214410"
ORIGIN      
        1 meltelslas sqcvsadktc nfspssdlhh hqvdgfnfps krrklfsdqf fnvdsqfqts
       61 vdlqvkdplp ldweqcldle sgkmyymnrk tlektwnwpk dhkldlelni sptssngseh
      121 fnggsissed snnnnnkqqq qhfssttnmv alpclnchll vilpksspac pnckyvhsfp
      181 alqptkypnt lslln
//
LOCUS       XP_016731071            1232 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: extensin-2 [Gossypium hirsutum].
ACCESSION   XP_016731071
VERSION     XP_016731071.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875582.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731071.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1232
                     /product="LOW QUALITY PROTEIN: extensin-2"
                     /calculated_mol_wt=138256
     Region          457..546
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     Region          623..701
                     /region_name="Extensin_2"
                     /note="Extensin-like region; pfam04554"
                     /db_xref="CDD:252669"
     CDS             1..1232
                     /gene="LOC107941957"
                     /coded_by="XM_016875582.2:141..3839"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:107941957"
ORIGIN      
        1 mmvprgnpar grfwpqmlma mavavvvlas nvgsvsaday iyasppppye yksppppsps
       61 ppppyvyksp ppppkheekp yeyksppppp pkekpyeyks ppppspsppp pyeykspppp
      121 spsppppyvy kspppppkhe ekpyeykspp pppkekpyey kspppppkek pyeykspppp
      181 spsppppyvy kspppppkhe ekpyeykspp pppkekpyey ksppppspsp ppyyyksppp
      241 pspsppppyy ykspppppkh eeqppyyyks ppppspsppp pyyykspppp spsppppyyy
      301 ksppppkhve qppyyykspp ppspsppppy yyksppppsp sppppyyyks ppppspsppp
      361 pyyykspppp pkheeqppyy yksppppsps ppppyyyksp pppphyvspp yyyksppppv
      421 ksppyyyhsp ppptpyyphp hphphphphp hplivrvvgk vycyrcydss ypekshgkkh
      481 legatvevtc kegekeitvy gktknngkfa vtvdgfdygk ygakaciakl happkgsscn
      541 ipmsvhdgik gavlkvksed nyevvlrakp fgygskkpyk kcekytpkpp thpykpppyy
      601 yksppppapt yvykspppps ptyvyksppp pvyyyksppp pkhveqppyy yksppppapt
      661 yvykspppps ptyvyksppp pvyyyksppp ptyvyksppp pkhveqppyy yksppppsps
      721 ppppyyyksp pppvhspppp yyqvppppkh veqppyyyks ppppspsppp pyyykspppp
      781 khveeppyyy ksppppspsp pppyyykspp ppkhveqppy yyksppppsp sppppyyyks
      841 ppppkhveep pyyykspppp spsppppyyy ksppppspsp pppyyykspp ppkhveeppy
      901 iyksppppsp sppppyyyks ppppkhveep pyyykspppp spsppppyyy ksppppspsp
      961 pppyyykspp ppkhveeppy iyksppppsp sppppyyyks ppppahsppp pyyykspppp
     1021 vhsppppyyy ksppppspsp pppyyykspp ppkhveeppy iyksppppsp sppppyyyks
     1081 ppppvhsppp pyyykspppp spsppppyyy ksppppvhsp pppyyykspp ppspsppppy
     1141 yyksppppvk apaptyhyns ppppspsppp pyyykspppp ahspsppyyy ksppppspsp
     1201 pppyyyhspp ppvksppppv yiyasppppt py
//
LOCUS       XP_016731073             867 aa            linear   PLN 06-AUG-2024
DEFINITION  clathrin interactor EPSIN 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016731073
VERSION     XP_016731073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875584.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..867
                     /product="clathrin interactor EPSIN 2 isoform X1"
                     /calculated_mol_wt=92529
     Region          26..142
                     /region_name="ENTH"
                     /note="Epsin N-Terminal Homology (ENTH) domain family;
                     cd03571"
                     /db_xref="CDD:340772"
     Site            order(31,35..36,69,75,79)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:340772"
     Region          188..>314
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          <429..688
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..867
                     /gene="LOC107941959"
                     /coded_by="XM_016875584.2:208..2811"
                     /db_xref="GeneID:107941959"
ORIGIN      
        1 mkkaigqtvr elkrevnkkv lkvpgieqkv ldatsnepwg phgslladia matrnyheyq
       61 mimtviwkrl sdtgknwrhv ykaltvleyl vghgservid direhayqis alsnfqyids
      121 sgrdqgnnvr kksqslvalv ndkeriievr qkaaanrdkf rntstggmyr pgsggygdky
      181 dydrygnkdy ddqngygrdr eygyrdddry grygdsnsrd gdrygrdyed rygrdgdrdd
      241 dyrgrsrsvd dyqygtrsrs sdrdrafded gassrgsgdr addhsqdgrr herkqseqni
      301 gappsyeeav tetqspvrse rvgqtsvaaa ppppptnnpn qaasdlsnsa sppnqqaeaf
      361 defdprgsfs aaptpapapa avptatavpa tavptastna eidlldalsd sfaivpvtpe
      421 ipatevdapa nsgamptfaa nqpasnfgnq gfddpfgdnp fkavastdsa pavqqistsm
      481 ptfqpatnqn dvapqppsas setvtnfdfg nsfsanaysa pnstnsqflp qemstqnqgs
      541 aysqttqpgi ygqqaqssan mysqptqpsa npygqpaqpg anaydqvgqp ssnaysqsvq
      601 psvnlysqpp qlganpysqp aqfnsgnlsr qgslvpvssq gahqitnspa vqnnndflsg
      661 lisepgskpa qtvtptstga laivpqpskd kfelksavwa dtlsrglvnl nisgpktnpl
      721 adigvdfdal nrkekrmekp apnavtstvt mgkamgsgsg igrsgattlr ppanpmmgss
      781 mgsmgmgmgm gmgggpvggm gmgggyggmn qqpmgmgmgm nnmgmnpgmg mnmgmgqrpq
      841 mqgmpggynp mmgsggysqq pygggyr
//
LOCUS       XP_016731074             853 aa            linear   PLN 06-AUG-2024
DEFINITION  clathrin interactor EPSIN 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016731074
VERSION     XP_016731074.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875585.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..853
                     /product="clathrin interactor EPSIN 2 isoform X2"
                     /calculated_mol_wt=91074
     Region          26..142
                     /region_name="ENTH"
                     /note="Epsin N-Terminal Homology (ENTH) domain family;
                     cd03571"
                     /db_xref="CDD:340772"
     Site            order(31,35..36,69,75,79)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:340772"
     Region          188..>300
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          <415..674
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..853
                     /gene="LOC107941959"
                     /coded_by="XM_016875585.2:208..2769"
                     /db_xref="GeneID:107941959"
ORIGIN      
        1 mkkaigqtvr elkrevnkkv lkvpgieqkv ldatsnepwg phgslladia matrnyheyq
       61 mimtviwkrl sdtgknwrhv ykaltvleyl vghgservid direhayqis alsnfqyids
      121 sgrdqgnnvr kksqslvalv ndkeriievr qkaaanrdkf rntstggmyr pgsggygdky
      181 dydrygnkdy ddqngygrdr eygyrdddry grygdsnsrd gdrygrdyed rygrdgdrdd
      241 dyrgrsrsvd dyqygtrsrs sdrdrafded gassrrherk qseqnigapp syeeavtetq
      301 spvrservgq tsvaaapppp ptnnpnqaas dlsnsasppn qqaeafdefd prgsfsaapt
      361 papapaavpt atavpatavp tastnaeidl ldalsdsfai vpvtpeipat evdapansga
      421 mptfaanqpa snfgnqgfdd pfgdnpfkav astdsapavq qistsmptfq patnqndvap
      481 qppsassetv tnfdfgnsfs anaysapnst nsqflpqems tqnqgsaysq ttqpgiygqq
      541 aqssanmysq ptqpsanpyg qpaqpganay dqvgqpssna ysqsvqpsvn lysqppqlga
      601 npysqpaqfn sgnlsrqgsl vpvssqgahq itnspavqnn ndflsglise pgskpaqtvt
      661 ptstgalaiv pqpskdkfel ksavwadtls rglvnlnisg pktnpladig vdfdalnrke
      721 krmekpapna vtstvtmgka mgsgsgigrs gattlrppan pmmgssmgsm gmgmgmgmgg
      781 gpvggmgmgg gyggmnqqpm gmgmgmnnmg mnpgmgmnmg mgqrpqmqgm pggynpmmgs
      841 ggysqqpygg gyr
//
LOCUS       XP_016731080             211 aa            linear   PLN 06-AUG-2024
DEFINITION  nucleoporin AMO1-like [Gossypium hirsutum].
ACCESSION   XP_016731080
VERSION     XP_016731080.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875591.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="nucleoporin AMO1-like"
                     /calculated_mol_wt=21854
     Region          <73..175
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..211
                     /gene="LOC107941962"
                     /coded_by="XM_016875591.2:139..774"
                     /db_xref="GeneID:107941962"
ORIGIN      
        1 mttfqpatnq nevapqppsa ssktvtnfdf gnsfsanays apngansqfl pqemstqnrg
       61 taysqttqpg iygqqaqssa nmysqptqps anpygqpaqp ganaydqlgq pssnaysqsv
      121 qpsvnpysqp pqpganpysq parfnsgnls rqgslvpvss qgahqitnsp avqnnndfls
      181 glisepgskp aqtvtptsmg alaivpqpsk g
//
LOCUS       XP_040943931             542 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943931
VERSION     XP_040943931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087997.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..542
                     /product="uncharacterized protein"
                     /calculated_mol_wt=62020
     Region          305..355
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          396..441
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..542
                     /gene="LOC107941961"
                     /coded_by="XM_041087997.1:235..1863"
                     /db_xref="GeneID:107941961"
ORIGIN      
        1 meesnnyghq hplllmlnqd qlihnqsgvt dcsrcgekvs apcfccaehc gfylhkvcae
       61 aplelnhpfh phhplllmqn apyssrryic nfcdkggnef vyhcschfdf hikcalftfn
      121 iaennlkele hvalqhplis tengheeled engdeeledv reyfgcwepl akythfspac
      181 gfnlhekcak lpfklnhvch rkhplalqfn serlsckicg etnrkavgfv ygcfpckfvv
      241 hiecasqspl qvikstnheh tftlvfrqvp ftcdiegnhv ahrcgtcnii ihknciswpr
      301 iikskwhdhr llhtyfhhie dfgvlncmic hdevnteygs yycskcnaif hvhcvteder
      361 sysivspede dempyessit vlesndagea tkiehflhih nlmlspvvgk nengcdgcll
      421 pisgpfyscs fcdfflhkac aelpkmkdvw hhlcqkplal isdrvfrcre clnvcnafay
      481 eccgckakkc lqcvlaltpg aqiclkhehp lfyyrdyngk cnacgyttra afrckimmit
      541 ii
//
LOCUS       XP_016731075             757 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016731075
VERSION     XP_016731075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875586.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..757
                     /product="uncharacterized protein"
                     /calculated_mol_wt=87477
     Region          193..235
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          246..288
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          298..348
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          391..437
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          556..602
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          673..723
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..757
                     /gene="LOC121202931"
                     /coded_by="XM_016875586.2:210..2483"
                     /db_xref="GeneID:121202931"
ORIGIN      
        1 meesnnyghq hplllilnqd qlirnqsgvt hcsrcgeevs vpcfccvehc gfylhkacad
       61 aplelnhpfh phhplvllqn ppysshlrcv cdfcdktckk fiyhcscgld fhikcalftf
      121 niaennlkel dhfalqlpli stsngdeele dvskcfgcwe plakyahfsp dcrfnlhekc
      181 aklpfklnhk chhkhpltlq fnserlscki cqvtrrrgfv ygcspckfvv hiecvsesld
      241 livedksheh pftlftrrss ficdacgteg scasyicctc nimvhkkcts lpriikskwh
      301 dhrlfhkyfl siedfrvldc imchdevnte hgsyycskct vifhvkcvmk dkdsyeiven
      361 edekstdesv ssitkvlern dageatvieh fkhnhylils drvgeyddkc cggcllpiva
      421 sfyyctqcdf flhkvcvelp kvkhvwhhrc rpplvlisne vfecvqclwl snafaykcee
      481 cetrtcfrci ialtpgartc lghkhpllfy skyigrcvac gkdgikglfr ckdcdfsldh
      541 kcfslpitfq ykndqhllsl tygddnsyse shfcdvcees rdpnlwfync atcdisahin
      601 cvlseypflk lgsifklred vhehpltvvk kiyyypncgk cgkpcfdlaf ectacnfiih
      661 kkcaslprii rskwhdhrlf lqyflriedf rvldciichd evntehssyy cskcpvifhm
      721 ecvmkykdsy aivenedees pdesvssitk vlernda
//
LOCUS       XP_016713928             692 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016713928
VERSION     XP_016713928.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858439.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016713928.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=79247
     Region          265..306
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          315..365
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          408..454
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          572..619
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..692
                     /gene="LOC107927389"
                     /coded_by="XM_016858439.2:252..2330"
                     /db_xref="GeneID:107927389"
ORIGIN      
        1 meesnnydhq hplllilnqe qlidyqsgvt dcsrcgekas apcfccaqhc gfylhkvcae
       61 aplelnhpfh qdhplilmqk ppdsdsdsds dsdsdsdgec icecicdfcd erceefiyhc
      121 ccgldfhikc alftfniaen nlkelehvtl qhplisteng teeledvskc lgcweplaky
      181 thfspdcgfn lhekctklpf klnhvwhrkh plvlqfnsqr lsckicgets rmgsgfvygc
      241 sackfvvhie casqsplqvi kstnhehpft vflrqvpftc dacgtegnhv aytcgtcnii
      301 ihkncislpr iikskwhdhr llhtyfhhie dfrvldciic hdevntehgs yycskctaif
      361 hvkcvmkdkd syeivenede espdesvssi tkvlerndag eatviehfkh ihylilsdrv
      421 geyddkccdg cllpivasfy yctqcdfflh kvcaelpkvk hvwhhrcrpa lvltsnevfe
      481 cvrclclsna faykceeceq ctclrciial tpgartclgh khpllfytey kgrcvacgkd
      541 ditglfrckd cnfsldhkcf slpirsqhrn dkhllslash ddnryseshf cdvceerrdp
      601 nlwfyhcaic dtsahvncvl geypfiklgs tvkvieyvhe hpltfvkkiy dypncrycge
      661 rcldfalect gcnfiahnrc prynctssds ee
//
LOCUS       XP_040943932             622 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943932
VERSION     XP_040943932.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087998.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..622
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=71279
     Region          195..236
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          245..295
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          338..384
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          502..549
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..622
                     /gene="LOC107927389"
                     /coded_by="XM_041087998.1:378..2246"
                     /db_xref="GeneID:107927389"
ORIGIN      
        1 mfllcaalwv lssqdsdsds dsdsdsdgec icecicdfcd erceefiyhc ccgldfhikc
       61 alftfniaen nlkelehvtl qhplisteng teeledvskc lgcweplaky thfspdcgfn
      121 lhekctklpf klnhvwhrkh plvlqfnsqr lsckicgets rmgsgfvygc sackfvvhie
      181 casqsplqvi kstnhehpft vflrqvpftc dacgtegnhv aytcgtcnii ihkncislpr
      241 iikskwhdhr llhtyfhhie dfrvldciic hdevntehgs yycskctaif hvkcvmkdkd
      301 syeivenede espdesvssi tkvlerndag eatviehfkh ihylilsdrv geyddkccdg
      361 cllpivasfy yctqcdfflh kvcaelpkvk hvwhhrcrpa lvltsnevfe cvrclclsna
      421 faykceeceq ctclrciial tpgartclgh khpllfytey kgrcvacgkd ditglfrckd
      481 cnfsldhkcf slpirsqhrn dkhllslash ddnryseshf cdvceerrdp nlwfyhcaic
      541 dtsahvncvl geypfiklgs tvkvieyvhe hpltfvkkiy dypncrycge rcldfalect
      601 gcnfiahnrc prynctssds ee
//
LOCUS       XP_040943933             597 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943933
VERSION     XP_040943933.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041087999.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..597
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=68009
     Region          265..306
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          315..365
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          408..454
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..597
                     /gene="LOC107927389"
                     /coded_by="XM_041087999.1:254..2047"
                     /db_xref="GeneID:107927389"
ORIGIN      
        1 meesnnydhq hplllilnqe qlidyqsgvt dcsrcgekas apcfccaqhc gfylhkvcae
       61 aplelnhpfh qdhplilmqk ppdsdsdsds dsdsdsdgec icecicdfcd erceefiyhc
      121 ccgldfhikc alftfniaen nlkelehvtl qhplisteng teeledvskc lgcweplaky
      181 thfspdcgfn lhekctklpf klnhvwhrkh plvlqfnsqr lsckicgets rmgsgfvygc
      241 sackfvvhie casqsplqvi kstnhehpft vflrqvpftc dacgtegnhv aytcgtcnii
      301 ihkncislpr iikskwhdhr llhtyfhhie dfrvldciic hdevntehgs yycskctaif
      361 hvkcvmkdkd syeivenede espdesvssi tkvlerndag eatviehfkh ihylilsdrv
      421 geyddkccdg cllpivasfy yctqcdfflh kvcaelpkvk hvwhhrcrpa lvltsnevfe
      481 cvrclclsna faykceeceq ctclrciial tpgartclgh khpllfytey kgrcvacgkd
      541 ditglfryiq kvifvmyvks veiqifgfti vqyvilllms ivslvnirss nlgvplk
//
LOCUS       XP_040943934             827 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943934
VERSION     XP_040943934.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088000.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..827
                     /product="uncharacterized protein"
                     /calculated_mol_wt=94536
     Region          544..594
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          637..683
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..827
                     /gene="LOC107941963"
                     /coded_by="XM_041088000.1:301..2784"
                     /db_xref="GeneID:107941963"
ORIGIN      
        1 meesnnyghq hplllilnqd qlihnqsgvt hcsrcgeevs vpcfycvehc gfylhkacad
       61 aplelkhpfh phhplvllqe ppssytrcvc dfcdktcekf iyhcscgldf hikcalftfn
      121 vaennlkeld hvalrdplip tenrdeelen vskcfgcwep lanythfspe cgfnlhekca
      181 elpfklnhec hrehplvlqf nserlpcqic lgirrrgfvy gcspcqfvvh iecasqsppp
      241 vikstnhehp ftlfnghqhp lllmlnqeql ihnqsgvtdc srcgekvsap cfscaehcgf
      301 ylhkvcaaap vklnhpfhln hplllmqksp hlsgayfcsf chefgdksvy hcssckldfh
      361 ikcalftfni aennlkeldh valrdpvist engddkledv skcfgcrepl anythfspyr
      421 gfnlhekcak ipfklnhvch rkhplvlqfn serlsckicq vtrrrgfvyg cssckfvihi
      481 eclspspiik deghqhpfsl llrqvpficd acgtegnhva ytcgtcniiv hkncislpri
      541 ikskwhdhrl lhkyfhyied frvlyciich devntehgsy ycskcnfifh vkcvmkdeal
      601 yeivenedde spnesassit qvlqrndage atviehfkhs hhlmlsdgvg eydnkccdgc
      661 llpivasfyy ctpcdfflhk vcvelpkvkh vwhhrcrppl iltsnevfrc vkcdclsnaf
      721 aykcedckgy tclrcvialt pgvartclgh khpllffiey rgrcvacgdd nikglfrftq
      781 kvifvmfvks veiqnfpfii vqhvillpms ivflenihss nsgvplr
//
LOCUS       XP_040943935             331 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943935
VERSION     XP_040943935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088001.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..331
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=37924
     Region          18..62
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..331
                     /gene="LOC107943512"
                     /coded_by="XM_041088001.1:516..1511"
                     /db_xref="GeneID:107943512"
ORIGIN      
        1 mrnalsflfk lnhgchrkhp lvlqfnsqrl sckicrvtrr stesgffygc spckfvvhie
       61 casqsplrvi kstnhehpft lfnehqhplf lmlnqeqlid nqsgvtdcsr cgdkvsatcf
      121 ycaehcgfyl hkvcaeaple lnhpfhlnhp lllmqksphl sgayfcsfch efgdksvyhc
      181 sscelefhik calftlniae nnlkelehva lhdplisten gdkklkdvsk cfgcweplam
      241 cthfspdcgf nlhekcaelp fklnhvtias illfynlian dslaryakyh geedlfmvvl
      301 lvsllfilnv hhnrhykllr iqimnihspc f
//
LOCUS       XP_040943936             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943936
VERSION     XP_040943936.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088002.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..239
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=27114
     CDS             1..239
                     /gene="LOC107943512"
                     /coded_by="XM_041088002.1:918..1637"
                     /db_xref="GeneID:107943512"
ORIGIN      
        1 mvvlllidnq sgvtdcsrcg dkvsatcfyc aehcgfylhk vcaeapleln hpfhlnhpll
       61 lmqksphlsg ayfcsfchef gdksvyhcss celefhikca lftlniaenn lkelehvalh
      121 dplistengd kklkdvskcf gcweplamct hfspdcgfnl hekcaelpfk lnhvtiasil
      181 lfynliands laryakyhge edlfmvvllv sllfilnvhh nrhykllriq imnihspcf
//
LOCUS       XP_040943937             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943937
VERSION     XP_040943937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088003.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..177
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=19851
     CDS             1..177
                     /gene="LOC107943512"
                     /coded_by="XM_041088003.1:159..692"
                     /db_xref="GeneID:107943512"
ORIGIN      
        1 meesnnyghq hplllilned qlihnqsdit dcsrcaekvs tpcfccaehc glylhksraf
       61 plfillgege meesnnyghq hplllilnqd qlihnqsgvt hcsrcgekvs apcfccaehc
      121 gfylhkvcae aplelnhpfh phhpllllqn apyssgryic nfcdkggtin klytlfs
//
LOCUS       XP_040943938             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943938
VERSION     XP_040943938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088004.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=18812
     CDS             1..168
                     /gene="LOC107943512"
                     /coded_by="XM_041088004.1:160..666"
                     /db_xref="GeneID:107943512"
ORIGIN      
        1 meesnnyghq hplllilned qlihnqsdit dcsrcaekvs tpcfccaehc glylhksraf
       61 plfillgege meesnnyghq hplllilnqd qlihnqsgvt hcsrcgekvs apcfccaehc
      121 gfylhkeplt nythfspdcg fnlhekcael pfqteswvps qasscsti
//
LOCUS       XP_040943939             822 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943939
VERSION     XP_040943939.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088005.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..822
                     /product="uncharacterized protein"
                     /calculated_mol_wt=94164
     Region          397..438
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          447..497
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          536..581
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          700..747
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..822
                     /gene="LOC121214411"
                     /coded_by="XM_041088005.1:196..2664"
                     /db_xref="GeneID:121214411"
ORIGIN      
        1 meesnnyghq hplllmlnqd qlihnqsgvt dcsrcgenvs apcfccaehc gfylhkeplt
       61 nythfspdcg fnlhekcael pfklnhgchr khplvlqfns qrlsckicrv krrstesgff
      121 ygcspckivv hiecasqspl qvikstnheh pfslfnghqh plllmlnqeq lidsqsgvtd
      181 csrcgekvsa pcfycaehcg fylhkvcaea plelnhpfhl nhplllmqks phlsgayfcs
      241 fchefgdksv yhcssceldf hikcalftfn iaennlkele hvalhdplis tengdkklkd
      301 vskcfgcwep lamythfspd cgfnlhekca elpfklnhvy hrkhplvlqf nskrlsckic
      361 qvprrrgfvy gcspckfvvh iecasqsslq vikntnhehp ftlflrqvpf tcdacgtegn
      421 hvsytcgtcn iiihkncisl sriirskwhd hplihtyfhh iedfrvldcl ichdevnteh
      481 gsyycskcdv ifhvkcamkd kdsyeivene deiphessis vierndagea tkikhfkhmh
      541 nlmsgpfvgg yenscngcml pisdpfyycs ecvfflhkac aeltkmknvw hhhcqeplsl
      601 isdkafecqe cwhisnafay eccgceenkc lrcvialtpg artclkhvhp lyfyrdydgq
      661 cnacgdttrg ygafcckdcn fvldlgcfsl pitarhkcde hllsltdndd nsyseshhcd
      721 iceesrdanr wfyhcttcdt sahvgcvlgs ypflklgsiy eetnhphpli ivkkkyyyld
      781 cnkcgkpced valecsklec kyivhwdcaa pyflrqwwkw gm
//
LOCUS       XP_040943940             623 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943940
VERSION     XP_040943940.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088006.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..623
                     /product="uncharacterized protein"
                     /calculated_mol_wt=71277
     Region          233..274
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          283..333
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          372..417
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          536..583
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..623
                     /gene="LOC121214412"
                     /coded_by="XM_041088006.1:613..2484"
                     /db_xref="GeneID:121214412"
ORIGIN      
        1 mlnqeqlidn qggvtdcsrc gekvsapcfy caelcgfylh kvcaeaplel hhpfhlnhpl
       61 llmqksphls gayfctfche fgdksvyhcs sceldfhikc alftlniaen nlkelehval
      121 hdplisteng dkklkdvskc fgcweplamy thfspdcgin lhekcaelpf klnhvyhrkh
      181 plvlqfnskr lsckicqvpr rrgfvygcsp ckfvvhieca sqsslqvikn tnhehpftlf
      241 lrqvpftcda cgsegnhvsy tcgtcniiih kncislprii kskwhdhpli htyfhhledf
      301 rvldclichd evntehgsyy cskcdvifhv kcamkdkdsy eivenedemp hessisvier
      361 ndageatkik hfkhmhnlml gpfvggyens cngcmlpisd pfyycsecvf flhkacaelt
      421 kmknvwhhhc qeplalisdk afecqecwhi snafayecsg ceenkclrcv ivltpgartc
      481 lkhvhplyfy rdyegqcnac gdttrgygaf cckdcnfvld lrcfslpita rhkcdehlls
      541 ltdnddnsys eshhcdicee srdpnrwfyh cttcdtsahv gcvlgsypfl klgsiyeetn
      601 hphpliivkk kyyyldcnkc gkp
//
LOCUS       XP_016729410             374 aa            linear   PLN 06-AUG-2024
DEFINITION  solute carrier family 35 member F1 [Gossypium hirsutum].
ACCESSION   XP_016729410
VERSION     XP_016729410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873921.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..374
                     /product="solute carrier family 35 member F1"
                     /calculated_mol_wt=41262
     Region          9..298
                     /region_name="SLC35F"
                     /note="Solute carrier family 35; pfam06027"
                     /db_xref="CDD:283644"
     CDS             1..374
                     /gene="LOC107940492"
                     /coded_by="XM_016873921.2:354..1478"
                     /db_xref="GeneID:107940492"
ORIGIN      
        1 mvnfkqfwtk ktlvglglgq flsllitstg fssselakrg inaptsqsfl nyvllsvvyg
       61 svmlyrrqal kakwyyyvil glvdveanyl vvkayqytsi tsvmlldcws ipsvmlltyi
      121 flktnyryrk iagvivcvag lvmvvfsdvh agdrsggsnp rkgdllviag atlyaisnvs
      181 eeflvknadr velmsflglf gaiisaiqis ivernelksi hwtagaafpf fgfslamflf
      241 ysfvpvllkm sgstmlnlsl ltsdmwavvi rifayhekvd wmyflafvav avgliiysgg
      301 dtdddqsrad vadqgtersk hfdeeagfdn lnrgntvgss kmgdtsrhdc mtssggreti
      361 enmsigkdmq gkks
//
LOCUS       XP_016729427             995 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g06710,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016729427
VERSION     XP_016729427.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873938.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..995
                     /product="pentatricopeptide repeat-containing protein
                     At1g06710, mitochondrial"
                     /calculated_mol_wt=111927
     Region          165..192
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          202..227
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <217..>606
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          233..262
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          303..329
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          335..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          370..396
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..438
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <432..>839
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          483..510
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          518..545
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          551..580
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          586..612
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          639..666
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          674..701
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          709..736
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          744..771
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          777..806
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          812..840
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          882..909
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          915..946
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          919..962
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          952..981
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..995
                     /gene="LOC107940504"
                     /coded_by="XM_016873938.2:95..3082"
                     /db_xref="GeneID:107940504"
ORIGIN      
        1 mqmrkrllnp llfyskslps spqnpqlphq fffspitqfi stssadnlng lidpddpfpm
       61 qnnprvepvs sqdfaflrad svppsqkkvd agkfsndavl ianailsdng efgdktqivl
      121 rqfrerinek mvvevlnlvk lkpelgvkff iwagrqigys htsavfnsll dllessnndh
      181 vhekflleir nddkevlkkl lnlligryck nglwimalee lgrlkdfgyk psratycalv
      241 qvflqadsld taylvyrems dagfhmdgyt lrcyayslcr mgqwrealtl iekeeckpdt
      301 afytkmisgl ceaslfeeam dflnrmrans cipnvvtyrv llcgclnkrq lgrckrvlnm
      361 mimegcypsp sifsslvhay cksgdysyaf kllkkmtkcg cqpgyvvyni liggicgnee
      421 lpssdvlela enaynemlaa gvilnkinvs nfarclcgvg kfekacniih emmrkgfipd
      481 tstyskviah lcnaskveka fllfgemkkn cvvpdvytyt ilidsfckag lieqarnwfd
      541 emvkvgcapn vvtytaliha ylkarkvska delfemmlsk gcipnvvtyt alidghckag
      601 qiekacqiya rmctnaeipd vdlyfkvvds daktpnvfty galvdglcka hkvkeahdll
      661 eamsvvgckp nqvvydalid gfckvgklde aqevfskmse hgyspniyty sslidrlfkd
      721 krldlalkvl skmlenscap nvviytemid glckagktde ayklmlmmee kgcypnvvty
      781 tamidgfgka gkinkslell eqmgskgvap nfitysvmin hccivglldk ayelleemkq
      841 tywprhiasy rkviegfnke fimslgllde vgkseslpvi pvyrvliynf ikagrlemal
      901 qlhheiasfs qvpaaycsty naliqslsla rkvnkafely admtrmggvp elstfihlik
      961 glitvnkwee alqlsdsfcq mdiqwlqeke tpdaa
//
LOCUS       XP_016729424             364 aa            linear   PLN 06-AUG-2024
DEFINITION  PTI1-like tyrosine-protein kinase 3 [Gossypium hirsutum].
ACCESSION   XP_016729424
VERSION     XP_016729424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..364
                     /product="PTI1-like tyrosine-protein kinase 3"
                     /calculated_mol_wt=40266
     Region          77..352
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(77..80,83,85,97,99,129,145..148,203,207..208,210,
                     220..221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..364
                     /gene="LOC107940501"
                     /coded_by="XM_016873935.2:316..1410"
                     /db_xref="GeneID:107940501"
ORIGIN      
        1 mrrwlccscq aeesyqahen ehlkapkdht dgnhrnsrva apvkpevqks pppievpals
       61 leelkektdn fgskaligeg sygrvyyasl nngkavavkk ldvstesesn vefltqvsmv
      121 srlkhdnfve lqgycvegnl rvlayefatm gslhdilhgr kgvqgaqpgp vldwmqrvri
      181 avdaargley lhekvqpsii hrdirssnvl lfedfkakia dfnlsnqapd maarlhstrv
      241 lgtfgyhape yamtgqltqk sdvysfgvvl lelltgrkpv dhtmprgqqs lvtwatprls
      301 edkvkqcvdp klkgeyppka vaklaavaal cvqyesefrp nmsivvkalq pllkapvpvp
      361 alet
//
LOCUS       XP_016729425             574 aa            linear   PLN 06-AUG-2024
DEFINITION  probable E3 ubiquitin-protein ligase ARI7 [Gossypium hirsutum].
ACCESSION   XP_016729425
VERSION     XP_016729425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..574
                     /product="probable E3 ubiquitin-protein ligase ARI7"
                     /calculated_mol_wt=64956
     Region          143..204
                     /region_name="RING-HC_ARI6-like"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana protein ariadne homolog 6 (ARI6) and similar
                     proteins; cd23141"
                     /db_xref="CDD:438503"
     Region          222..286
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          300..354
                     /region_name="Rcat_RBR_ARI7-like"
                     /note="Rcat domain found in E3 ubiquitin-protein ligase
                     ARI7 and similar proteins; cd22583"
                     /db_xref="CDD:439034"
     Region          364..>525
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..574
                     /gene="LOC107940502"
                     /coded_by="XM_016873936.2:143..1867"
                     /db_xref="GeneID:107940502"
ORIGIN      
        1 meseddmidd svsmeddfys gdlsycyddd pndndndyyf dddndyglle ddddddqdgi
       61 vsrrpqlsyt vlkeadikqq qeddiskvst vlsisrvdat illryynwsv skvhdewfad
      121 eggvrqsvgl lerpavqvsn areltcgicf esflrdnits vacghpfcls cwrgyistti
      181 ydgpgclslr cpdpccnaav gkdmidklat seekekysry llrsyvednr ktkwcpapgc
      241 eyavdftvgs gnfdvscncs ysfcwnctee ahrpvdcetv akwilknsae senmnwilan
      301 skpcpkckrp ieknqgcmhm tctppckfef cwlclgawae hgertggfya cnryeaakqe
      361 gvydeaerrr emaknsleky thyyerwasn qlsrqkalad lhqmqtvhle klsdlqctpe
      421 sqlkfiteaw lqivecrrvl kwtyaygyyl pehehakrqf feylqgeaes glerlhqcae
      481 kelnkfvtgd gpskefddfr aklagltsvt knyfenlvra lengladvds qaaaacsktt
      541 sskntggtsk trggrgkgss ksggsgrnvd dtsn
//
LOCUS       XP_016729426             532 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 24 [Gossypium hirsutum].
ACCESSION   XP_016729426
VERSION     XP_016729426.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873937.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016729426.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..532
                     /product="calcium-dependent protein kinase 24"
                     /calculated_mol_wt=60617
     Region          59..317
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(66..70,74,87,89,122,138..141,145,147,183..184,186,
                     188..189,191,204..205,208,222..226,228)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(66..69,74,87,89,122,138..141,145,188..189,191,
                     204..205)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(70,145,147,183..184,186,188,208,222..226,228)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(204..212,222..226)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          361..499
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..532
                     /gene="LOC107940503"
                     /coded_by="XM_016873937.2:192..1790"
                     /db_xref="GeneID:107940503"
ORIGIN      
        1 mgscvarpsk ligvrkgdyp ksksgrsyfn skcsrkskss rtsnnkvlkd pleenilhky
       61 eignelgrge fgityqcfel etgeayackk iskaklktdi diedvqreve ilrhlpkhpn
      121 lvsykdafed deavylvmel crggelfdri vakghytera aakviktile ivkvchehgv
      181 ihrdlkpenf lladesetap ikvidfglsi fyepgerfsd ivgspyymap evlrrnygke
      241 idiwstgvil yillcgvppf wddteegiar aiirgvidfe rdpwpkvsae vkdlvrsmld
      301 pnpytrislq evlehpwiqn lqnapnfnlg envgarikqf slmskfkkkv lrvvadnlpn
      361 eqidviiemf nmmdtdengy lsfeelrdgl qkighsvgdp dvrmlmeaad idgngtlsce
      421 efvimvvhlk rigndehlaq afnhfdknqs gyiefeelke tlmqddpgpn neqlikdimq
      481 dvdkdkdgri syqefkamml tgmdwkmasr qysralinav sikilrqsgq lk
//
LOCUS       XP_016722809             293 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722809
VERSION     XP_016722809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..293
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=32890
     CDS             1..293
                     /gene="LOC107934809"
                     /coded_by="XM_016867320.2:241..1122"
                     /db_xref="GeneID:107934809"
ORIGIN      
        1 mkkstmwvfi fpiqedelpg slspssdetd sirshikkmg picksrkkfv hvspwssmae
       61 ddnfdeqils ngsfissadd etmwlssgcf spssffkern gsdewlvswl stmasastdl
      121 dsssqaseae niedlngdep ifwpferkid wkseetwkhf tmsprkdiik vtaleetint
      181 nknlqkpkqg skdchnggrk irkgntmpsr lrestkvsvk ivplnienqi lalkveeddt
      241 mgsistcrnl weddftsngd vpiekvvglg efdghegids dfnegvflld eal
//
LOCUS       XP_016722810             281 aa            linear   PLN 06-AUG-2024
DEFINITION  L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
            transferase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016722810
VERSION     XP_016722810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867321.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..281
                     /product="L-aminoadipate-semialdehyde
                     dehydrogenase-phosphopantetheinyl transferase isoform X2"
                     /calculated_mol_wt=32533
     Region          10..188
                     /region_name="Sfp"
                     /note="Phosphopantetheinyl transferase [Coenzyme transport
                     and metabolism]; COG2091"
                     /db_xref="CDD:441694"
     CDS             1..281
                     /gene="LOC107934809"
                     /coded_by="XM_016867321.2:123..968"
                     /db_xref="GeneID:107934809"
ORIGIN      
        1 mekgvrrwiv diskwnpssn dfsfalsllp qthhssitrf vkmedrkral vslllqytlv
       61 hevlgipypd iiinrtlegk pflecarfcf efpnfnfnvs hhgdyvaias eplclvgldi
      121 vnfmipeket vpeyiqnfss yfsssewdri isvgnneevl aefyrywclk eayvkaigsg
      181 layglhkvef hhtnwtsisv kvdgvtnqqw rfwlfdldkg hsvsiarghp rlaiesykrs
      241 lkrtkfneee hnvglhlpnp rfvlrtveel isvihkakrs c
//
LOCUS       XP_016722811             272 aa            linear   PLN 06-AUG-2024
DEFINITION  L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
            transferase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016722811
VERSION     XP_016722811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867322.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..272
                     /product="L-aminoadipate-semialdehyde
                     dehydrogenase-phosphopantetheinyl transferase isoform X3"
                     /calculated_mol_wt=31473
     Region          10..188
                     /region_name="Sfp"
                     /note="Phosphopantetheinyl transferase [Coenzyme transport
                     and metabolism]; COG2091"
                     /db_xref="CDD:441694"
     CDS             1..272
                     /gene="LOC107934809"
                     /coded_by="XM_016867322.2:106..924"
                     /db_xref="GeneID:107934809"
ORIGIN      
        1 mekgvrrwiv diskwnpssn dfsfalsllp qthhssitrf vkmedrkral vslllqytlv
       61 hevlgipypd iiinrtlegk pflecarfcf efpnfnfnvs hhgdyvaias eplclvgldi
      121 vnfmipeket vpeyiqnfss yfsssewdri isvgnneevl aefyrywclk eayvkaigsg
      181 layglhkvef hhtnwtsisv kvdgvtnqqw rfwlfdldkg hsvsiarghp rlaiesykrs
      241 lkrtkfneee hnvglhlpnp rrrasgitit ff
//
LOCUS       XP_016722812             269 aa            linear   PLN 06-AUG-2024
DEFINITION  L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl
            transferase isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016722812
VERSION     XP_016722812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867323.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="L-aminoadipate-semialdehyde
                     dehydrogenase-phosphopantetheinyl transferase isoform X4"
                     /calculated_mol_wt=31286
     Region          10..188
                     /region_name="Sfp"
                     /note="Phosphopantetheinyl transferase [Coenzyme transport
                     and metabolism]; COG2091"
                     /db_xref="CDD:441694"
     CDS             1..269
                     /gene="LOC107934809"
                     /coded_by="XM_016867323.2:106..915"
                     /db_xref="GeneID:107934809"
ORIGIN      
        1 mekgvrrwiv diskwnpssn dfsfalsllp qthhssitrf vkmedrkral vslllqytlv
       61 hevlgipypd iiinrtlegk pflecarfcf efpnfnfnvs hhgdyvaias eplclvgldi
      121 vnfmipeket vpeyiqnfss yfsssewdri isvgnneevl aefyrywclk eayvkaigsg
      181 layglhkvef hhtnwtsisv kvdgvtnqqw rfwlfdldkg hsvsiarghp rlaiesykrs
      241 lkrtkfneee hnvglhlpnp rlfftfiff
//
LOCUS       XP_040943941             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943941
VERSION     XP_040943941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088007.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=24786
     CDS             1..220
                     /gene="LOC107934809"
                     /coded_by="XM_041088007.1:462..1124"
                     /db_xref="GeneID:107934809"
ORIGIN      
        1 mkkstmwvfi fpiqgcfsps sffkerngsd ewlvswlstm asastdldss sqaseaenie
       61 dlngdepifw pferkidwks eetwkhftms prkdiikvta leetintnkn lqkpkqgskd
      121 chnggrkirk gntmpsrlre stkvsvkivp lnienqilal kveeddtmgs istcrnlwed
      181 dftsngdvpi ekvvglgefd ghegidsdfn egvflldeal
//
LOCUS       XP_016729416             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729416
VERSION     XP_016729416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=24786
     CDS             1..220
                     /gene="LOC107934809"
                     /coded_by="XM_016873927.2:241..903"
                     /db_xref="GeneID:107934809"
ORIGIN      
        1 mkkstmwvfi fpiqgcfsps sffkerngsd ewlvswlstm asastdldss sqaseaenie
       61 dlngdepifw pferkidwks eetwkhftms prkdiikvta leetintnkn lqkpkqgskd
      121 chnggrkirk gntmpsrlre stkvsvkivp lnienqilal kveeddtmgs istcrnlwed
      181 dftsngdvpi ekvvglgefd ghegidsdfn egvflldeal
//
LOCUS       XP_016722806             350 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722806
VERSION     XP_016722806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38724
     Region          94..>201
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     Region          <115..>163
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..350
                     /gene="LOC107934806"
                     /coded_by="XM_016867317.2:350..1402"
                     /db_xref="GeneID:107934806"
ORIGIN      
        1 mrapsllaqc lpglvpqdrg sqsmsttser dvhlsspave ilpsktahpy kyagdnvdlq
       61 glnvfkgris vadiigftgs elisskpegf lkswdssidl vnilkheird gqlsfrgkrv
      121 lelgcgyglp gifaclkgac tmhfqdlsae tircatipnv lanleqardr qsrqpesplt
      181 psrqtlaptv rfyagdweel psvlsvvrnd vsemtpglsf sfseedfldg cssqdgsila
      241 qelslrrsrr lsrsrawera setdqgeggy dvilmteipy pmsslkklya likkclrppy
      301 gvvylatkkn yvgfntaarh lrslvdeegi fgahlikevs drdiwkfflk
//
LOCUS       XP_016722813             248 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma-secretase subunit APH1-like [Gossypium hirsutum].
ACCESSION   XP_016722813
VERSION     XP_016722813.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867324.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722813.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..248
                     /product="gamma-secretase subunit APH1-like"
                     /calculated_mol_wt=27261
     Region          3..239
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..248
                     /gene="LOC107934811"
                     /coded_by="XM_016867324.2:221..967"
                     /db_xref="GeneID:107934811"
ORIGIN      
        1 mtvaagigya lvalgpslsl fiafiskkpf liltllsstl vwlisliils giwraflpln
       61 sttwwpfail ifssiafqeg lrllfwkvyk rledildafa drvskprlyl tdkmqialag
      121 glghgvahav ffclslltpa fgpatyfvdr csqipfflvs aiialafvtv htfsmviafn
      181 gyaegnkvdq lfvpsvhlaa gmmtlinfay ggcvigipll flmailtvmh cgrmvwrrls
      241 esqrqvds
//
LOCUS       XP_016722843             278 aa            linear   PLN 06-AUG-2024
DEFINITION  putative NAC domain-containing protein 94 [Gossypium hirsutum].
ACCESSION   XP_016722843
VERSION     XP_016722843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..278
                     /product="putative NAC domain-containing protein 94"
                     /calculated_mol_wt=32391
     Region          29..156
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..278
                     /gene="LOC107934845"
                     /coded_by="XM_016867354.2:19..855"
                     /db_xref="GeneID:107934845"
ORIGIN      
        1 mihlsfwfrk ttttkkkqvs kdtkmvltgf rfsptdeevi eilgqkvsgn tsmtafdfii
       61 qkdiydfepq elhgsestig lnkneryyyc rretdsrevm grgwwkatsh lkavsspnge
      121 vmgykrpltf hrfkdniqgn rkgaiktdwi mheyglqsih tewrlckiky kgkekveedm
      181 tpmektlhsn nktlltsfea kdgsssrsns iapmqlelaf eqppltqpil pvstdinyyy
      241 dsycwsnsni yedhqladql dtlseqpfsd lwswddyh
//
LOCUS       XP_016722844            1197 aa            linear   PLN 06-AUG-2024
DEFINITION  ATPase family AAA domain-containing protein At1g05910 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016722844
VERSION     XP_016722844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867355.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1197
                     /product="ATPase family AAA domain-containing protein
                     At1g05910 isoform X1"
                     /calculated_mol_wt=132548
     Region          229..615
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
     Region          380..549
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(425..427,448,450..451,484..485)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          704..>770
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          896..1006
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(923,928,931,970,974,983)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1197
                     /gene="LOC107934846"
                     /coded_by="XM_016867355.2:246..3839"
                     /db_xref="GeneID:107934846"
ORIGIN      
        1 mypkrsgqad rpvtrplrss drlrrrpkvy grpylyytpt iirnkksrtk trtaasriak
       61 mlrsgdrpvr tsngssgtan lrrssrkrrv svnlagytes sgsgdedmmr pyrprrnrva
      121 nsvsqdesps pkqkktsdtk eaprreglrp rrsktvkqin lgyddeqsts eekvgedete
      181 ngndlddeaa dddqndaede gdeeaegeee eeeedegdde egeeeqegrr rydlrnradv
      241 rrlsmdeskq rsrsprrvlr qgmgtkvsrd vrkggsrvhk rhrltraeds ddsilvdeld
      301 qgpaipwgrg gsrsgppwlf ggldmhgtta wglnvaasgw gnqsdpfatl tsgiqtagps
      361 skggadiqpl qvdesvsfde igglseyvda lkemvffpll ypdffasyhi tpprgvllcg
      421 ppgtgktlia ralasaaska gqkvsfymrk gadvlskwvg eaerqlkllf eeaqrnqpsi
      481 iffdeidgla pvrsskqeqi hnsivstlla lmdgldsrgq vvligatnri daidgalrrp
      541 grfdrefnfp lpgcearaei ldihtrkwkq ppskelkmel aascvgycga dlkalcteaa
      601 ihafrekypq vytsddkyli dvdsvkveky hfieamstit pasqrgsivh srplslvvap
      661 clqrhlqksm nhisdifppl tvsseltkls ilsygsaipl vyrprlllcg gdgsgldhlg
      721 pailhelekf pvhslglpsl lsdpsaktse eaavhifsea rrttpsilyi pqfnlwwdna
      781 yeqlravllt lleelpsdlp illlgtssss laeldgnpys vfpqrsvyql dkpsiedrsl
      841 ffdglieaal svlleamtkk skepkslpel pkvpkvasgp kvselkakve aeqhairrlr
      901 mclrdvcnri lydkrfsafh ypvtdedapn yrsiiqnpmd vatllqrvds gqyltcsafv
      961 qdvdlivtna kayngddyng arivsracel rdavhgmlsq mdpalvaycd kiaaqggpah
     1021 mpddlglppa vpvvqlgtst rasarlrnvq peadlqsyea lkrpkknadt apaaedksqa
     1081 sdsvqmkpsq tlevneince rdeptlgdgk qqetsteang sqdtimsdge istqaesvkk
     1141 llvertgnyg ipelerlysr imkgifesrv gddddpkpsv lefllkfaed danfssl
//
LOCUS       XP_016722845            1197 aa            linear   PLN 06-AUG-2024
DEFINITION  ATPase family AAA domain-containing protein At1g05910 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016722845
VERSION     XP_016722845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1197
                     /product="ATPase family AAA domain-containing protein
                     At1g05910 isoform X1"
                     /calculated_mol_wt=132548
     Region          229..615
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
     Region          380..549
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(425..427,448,450..451,484..485)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          704..>770
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          896..1006
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(923,928,931,970,974,983)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1197
                     /gene="LOC107934846"
                     /coded_by="XM_016867356.2:334..3927"
                     /db_xref="GeneID:107934846"
ORIGIN      
        1 mypkrsgqad rpvtrplrss drlrrrpkvy grpylyytpt iirnkksrtk trtaasriak
       61 mlrsgdrpvr tsngssgtan lrrssrkrrv svnlagytes sgsgdedmmr pyrprrnrva
      121 nsvsqdesps pkqkktsdtk eaprreglrp rrsktvkqin lgyddeqsts eekvgedete
      181 ngndlddeaa dddqndaede gdeeaegeee eeeedegdde egeeeqegrr rydlrnradv
      241 rrlsmdeskq rsrsprrvlr qgmgtkvsrd vrkggsrvhk rhrltraeds ddsilvdeld
      301 qgpaipwgrg gsrsgppwlf ggldmhgtta wglnvaasgw gnqsdpfatl tsgiqtagps
      361 skggadiqpl qvdesvsfde igglseyvda lkemvffpll ypdffasyhi tpprgvllcg
      421 ppgtgktlia ralasaaska gqkvsfymrk gadvlskwvg eaerqlkllf eeaqrnqpsi
      481 iffdeidgla pvrsskqeqi hnsivstlla lmdgldsrgq vvligatnri daidgalrrp
      541 grfdrefnfp lpgcearaei ldihtrkwkq ppskelkmel aascvgycga dlkalcteaa
      601 ihafrekypq vytsddkyli dvdsvkveky hfieamstit pasqrgsivh srplslvvap
      661 clqrhlqksm nhisdifppl tvsseltkls ilsygsaipl vyrprlllcg gdgsgldhlg
      721 pailhelekf pvhslglpsl lsdpsaktse eaavhifsea rrttpsilyi pqfnlwwdna
      781 yeqlravllt lleelpsdlp illlgtssss laeldgnpys vfpqrsvyql dkpsiedrsl
      841 ffdglieaal svlleamtkk skepkslpel pkvpkvasgp kvselkakve aeqhairrlr
      901 mclrdvcnri lydkrfsafh ypvtdedapn yrsiiqnpmd vatllqrvds gqyltcsafv
      961 qdvdlivtna kayngddyng arivsracel rdavhgmlsq mdpalvaycd kiaaqggpah
     1021 mpddlglppa vpvvqlgtst rasarlrnvq peadlqsyea lkrpkknadt apaaedksqa
     1081 sdsvqmkpsq tlevneince rdeptlgdgk qqetsteang sqdtimsdge istqaesvkk
     1141 llvertgnyg ipelerlysr imkgifesrv gddddpkpsv lefllkfaed danfssl
//
LOCUS       XP_016722846            1196 aa            linear   PLN 06-AUG-2024
DEFINITION  ATPase family AAA domain-containing protein At1g05910 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016722846
VERSION     XP_016722846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1196
                     /product="ATPase family AAA domain-containing protein
                     At1g05910 isoform X2"
                     /calculated_mol_wt=132477
     Region          229..615
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
     Region          380..549
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(425..427,448,450..451,484..485)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          704..>770
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          896..1006
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(923,928,931,970,974,983)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1196
                     /gene="LOC107934846"
                     /coded_by="XM_016867357.2:252..3842"
                     /db_xref="GeneID:107934846"
ORIGIN      
        1 mypkrsgqad rpvtrplrss drlrrrpkvy grpylyytpt iirnkksrtk trtaasriak
       61 mlrsgdrpvr tsngssgtan lrrssrkrrv svnlagytes sgsgdedmmr pyrprrnrva
      121 nsvsqdesps pkqkktsdtk eaprreglrp rrsktvkqin lgyddeqsts eekvgedete
      181 ngndlddeaa dddqndaede gdeeaegeee eeeedegdde egeeeqegrr rydlrnradv
      241 rrlsmdeskq rsrsprrvlr qgmgtkvsrd vrkggsrvhk rhrltraeds ddsilvdeld
      301 qgpaipwgrg gsrsgppwlf ggldmhgtta wglnvaasgw gnqsdpfatl tsgiqtagps
      361 skggadiqpl qvdesvsfde igglseyvda lkemvffpll ypdffasyhi tpprgvllcg
      421 ppgtgktlia ralasaaska gqkvsfymrk gadvlskwvg eaerqlkllf eeaqrnqpsi
      481 iffdeidgla pvrsskqeqi hnsivstlla lmdgldsrgq vvligatnri daidgalrrp
      541 grfdrefnfp lpgcearaei ldihtrkwkq ppskelkmel aascvgycga dlkalcteaa
      601 ihafrekypq vytsddkyli dvdsvkveky hfieamstit pasqrgsivh srplslvvap
      661 clqrhlqksm nhisdifppl tvsseltkls ilsygsaipl vyrprlllcg gdgsgldhlg
      721 pailhelekf pvhslglpsl lsdpsaktse eaavhifsea rrttpsilyi pqfnlwwdna
      781 yeqlravllt lleelpsdlp illlgtssss laeldgnpys vfpqrsvyql dkpsiedrsl
      841 ffdglieaal svlleamtkk skepkslpel pkvpkvasgp kvselkakve aeqhairrlr
      901 mclrdvcnri lydkrfsafh ypvtdedapn yrsiiqnpmd vatllqrvds gqyltcsafv
      961 qdvdlivtna kayngddyng arivsracel rdavhgmlsq mdpalvaycd kiaaqggpah
     1021 mpddlglppa vpvvqlgtst rasarlrnvq peadlqsyea lkrpkknadt apaedksqas
     1081 dsvqmkpsqt levneincer deptlgdgkq qetsteangs qdtimsdgei stqaesvkkl
     1141 lvertgnygi pelerlysri mkgifesrvg ddddpkpsvl efllkfaedd anfssl
//
LOCUS       XP_016722816             480 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WHAT'S THIS FACTOR 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016722816
VERSION     XP_016722816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867327.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..480
                     /product="protein WHAT'S THIS FACTOR 1, chloroplastic"
                     /calculated_mol_wt=54704
     Region          57..394
                     /region_name="PORR"
                     /note="Plant organelle RNA recognition domain; pfam11955"
                     /db_xref="CDD:432218"
     CDS             1..480
                     /gene="LOC107934814"
                     /coded_by="XM_016867327.2:501..1943"
                     /db_xref="GeneID:107934814"
ORIGIN      
        1 mllsvscqsd nflsssllqs snpsfislkr tkksfqniyn kpqslslsis csslkivrsp
       61 sldkhvvkqn kirfvqklkt lllskpkhfl pihilskcra ylcihkprsi lsmiyrypti
      121 felftipmpp tpfnatksgy qlcvrltpaa kslamqelnl ksaisgflan klqkllmlss
      181 hrrlllskiv hlgphlglsp nfrsrlcndh pdkfkivgts ygmalelvhw dpelavplks
      241 ppvnrglivd rplkfkqlnl rkglnlkrrh rdflmkfnel pdicpyntsl ddfpksslea
      301 ekracgvvre vlgmmvekrt lidhlthfrk efglpnklra mivrhpelfy vslkgmrdsv
      361 flvegfddkg vllekdeslv irdqlmalva egkrirrekr karingtild dcdnndnvev
      421 edgdyddgdy ddgfenlfds edsdleydfh dddnessmly anggnavfwt gddngdsepw
//
LOCUS       XP_016722818             256 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GDP-dissociation inhibitor 1 [Gossypium hirsutum].
ACCESSION   XP_016722818
VERSION     XP_016722818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="rho GDP-dissociation inhibitor 1"
                     /calculated_mol_wt=29135
     Region          72..251
                     /region_name="Rho_GDI"
                     /note="RHO protein GDP dissociation inhibitor; pfam02115"
                     /db_xref="CDD:460449"
     CDS             1..256
                     /gene="LOC107934816"
                     /coded_by="XM_016867329.2:133..903"
                     /db_xref="GeneID:107934816"
ORIGIN      
        1 mssaavgtfs askqigfnkn etkageeeel rdeknkkfid dndeeainng dephddqhee
       61 eeeyddddak lksekeldlg pqfslkeqle kdkddeslrr wkeqllgsvd msafgeskep
      121 evkilslsiv spgrpdiilp ipfvtkpktc lftlkegsrf rlkftfnvsn nivsglkyvn
      181 tvwktgirvd ntkimlgtfs pqkepytfel eeettpsglf argsyavrtk fvddddkvyl
      241 dvsyhfeiqk nwgsrp
//
LOCUS       XP_016722814             604 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein At1g14780 [Gossypium hirsutum].
ACCESSION   XP_016722814
VERSION     XP_016722814.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867325.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722814.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..604
                     /product="MACPF domain-containing protein At1g14780"
                     /calculated_mol_wt=67433
     Region          <14..102
                     /region_name="YhcR"
                     /note="DNA/RNA endonuclease YhcR, contains UshA esterase
                     domain [RNA processing and modification]; COG4085"
                     /db_xref="CDD:443261"
     Region          107..315
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..604
                     /gene="LOC107934812"
                     /coded_by="XM_016867325.2:187..2001"
                     /db_xref="GeneID:107934812"
ORIGIN      
        1 meetekpiev lamealgkgy ditgdfrlky akgtrllvld etnkrdivfp gaasftmkev
       61 sqdirldkgd rirfksdvle fnqmsellnq kssiqgkvps gylnsifdls gnwlhdaadt
      121 ktlafdgyfi slyylhltas plvlndrvkk svpphwdpaa lsrfirtygt hiivgmaigg
      181 qdlicvrqns sstiptselr gyledlgdvm fsdgkspsli qrksrdgkqk vpdvfnrilq
      241 sstmqlasia etsskdglti icskrggnaf lhshsnwlqt vpakpegiff kfvpitsllt
      301 gipgsgylsh ainlylrykp tpedlryfle fqvpqqwapm fcglplrhqt rkascpslqf
      361 tflgptlhvn stqvtselkp vvglrlyleg kkcnrlalhv lhlsslpsim aftsskpsqw
      421 rgsdeykssd qflepvrwkr ysnvctslik ydpnwlqevs ggvfvvtgaq liskgkwpkt
      481 vlhlrllyth iphctirkte wavapdtsrk gsfltnlsmt fsftqgtamt gqqkqaptal
      541 nsgvypdgpp epirskkllk yvdisevvrg phdapghwlv iaaklvnesg rinlqvkfal
      601 ldyp
//
LOCUS       XP_016722847             683 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 21 [Gossypium hirsutum].
ACCESSION   XP_016722847
VERSION     XP_016722847.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722847.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..683
                     /product="DEAD-box ATP-dependent RNA helicase 21"
                     /calculated_mol_wt=78065
     Region          262..677
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..683
                     /gene="LOC107934847"
                     /coded_by="XM_016867358.2:98..2149"
                     /db_xref="GeneID:107934847"
ORIGIN      
        1 msnnnppkpv fltkaqreql alqrleeqra qqkrriedlr sangaannrs dsssgkptsd
       61 ssdrrdrerq rerdreserr nrerereeea karerarsek laererekel eaikeqylgs
      121 kkpkkrvikp sekfrfsfdw entedtsrdm nslyqnphea qllfgrgfra gmdrreqkkl
      181 aaknekemrd eirkkdgvee kpeeaaaqkl keeaantydt fdmrvdkhws dkkleemter
      241 dwrifredfn isykgskipr pmrswseskl taellkaver vgykkpspiq maaiplglqq
      301 rdvigiaetg sgktaafvlp mlayisrlpp mseeneaegp yavvmaptre laqqiedetm
      361 kfahylgikv vsivggqsie eqgfrirqgc evviatpgrl ldclerryav lnqcnyvvld
      421 eadrmidmgf epqvvgvlda mpssnlkpen edeeldekri yrttymfsat mppaverlar
      481 kylrnpvvvt igtagkatdl isqhvmmvke sekfprlqkl ldelgdktai vfvntkknad
      541 tisknldksg ykvttlhggr sqeqreisle gfrakrfnvl vatdvagrgi dipdvahvin
      601 ydmpgniemy thrigrtgra gktgvattfl tlhdtdvffd lkqmlvqsgs pvphelakhe
      661 askfkpgtip drpprrndtv fah
//
LOCUS       XP_016722822             135 aa            linear   PLN 06-AUG-2024
DEFINITION  dCTP pyrophosphatase 1 [Gossypium hirsutum].
ACCESSION   XP_016722822
VERSION     XP_016722822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="dCTP pyrophosphatase 1"
                     /calculated_mol_wt=15072
     Region          12..102
                     /region_name="NTP-PPase_RS21-C6_like"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) MazG-like domain found in mouse RS21-C6 protein
                     and its homologs; cd11537"
                     /db_xref="CDD:212144"
     Site            order(14..15,18,21..22,24,30..31,34..35,37..38,41,44..45,
                     48..49,69..71,73..75,77..78,80,83..84,86..87,89,91..92,
                     94..96,98..99,101..102)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:212144"
     Site            order(15,40,43,72,75,79)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:212144"
     Site            order(27,31..32,34..36,38..39,42..43,45,48..49,79)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212144"
     CDS             1..135
                     /gene="LOC107934822"
                     /coded_by="XM_016867333.2:89..496"
                     /db_xref="GeneID:107934822"
ORIGIN      
        1 meqegvtlee lkkkmadfak erdwdqfhsp rnlllalvge vgelseifqw kgevprglpg
       61 wedeekqhlg eelsdvllyl vrlsdicgvd lgkaalrkme lnaikypvkl ckgsskkqtq
      121 fngdsgdtad tdqgh
//
LOCUS       XP_016722820             385 aa            linear   PLN 06-AUG-2024
DEFINITION  probable purine permease 4 [Gossypium hirsutum].
ACCESSION   XP_016722820
VERSION     XP_016722820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867331.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="probable purine permease 4"
                     /calculated_mol_wt=42430
     Region          23..340
                     /region_name="PUNUT"
                     /note="Purine nucleobase transmembrane transport;
                     pfam16913"
                     /db_xref="CDD:293518"
     CDS             1..385
                     /gene="LOC107934818"
                     /coded_by="XM_016867331.2:128..1285"
                     /db_xref="GeneID:107934818"
ORIGIN      
        1 msnttqtine qdqksvtnkr ylplllvnyg flfigslsss llskyyfnhk gssrwvstwv
       61 qsagfpllii pivvpyylfk stqrkpftgf tpkilalsif igfmlgvnnl lfswgnsylp
      121 vstsslllss qlvfnlilsv iivkqkitfm nlncvilltl ssvllaless ndqphdvtrt
      181 kyfvgylati gagllfalyl pimekvykkv ycyamvmemq mvmevaatvl asigmvfdgg
      241 ftemkregyq vfdkgekvyw atvvsnvvsw qlcfmgtagm vfltcsltgg icmtallmmn
      301 vvggvvvyke efggvkvvst vmcgwgfcsy vygmyvknkm lkdrddgggg ghdsddknvg
      361 synpiemtqi vnsssssspp lhigv
//
LOCUS       XP_040943942             868 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase-like 8 [Gossypium hirsutum].
ACCESSION   XP_040943942
VERSION     XP_040943942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088008.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..868
                     /product="wall-associated receptor kinase-like 8"
                     /calculated_mol_wt=97164
     Region          552..825
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(552..556,560,572,574,608,624..627,631,633,676,678,
                     680..681,683,694,697,714..717)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(552..556,560,572,574,608,624..627,631,676,678,
                     680..681,683,694)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(556,631,633,676,678,680,697,714..717)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(693..699,710..717)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..868
                     /gene="LOC107934827"
                     /coded_by="XM_041088008.1:325..2931"
                     /db_xref="GeneID:107934827"
ORIGIN      
        1 meilgsftsr dvivnnpvty sncpskgdng sgdvdltdsp fffsgnnlfg sigcghsatv
       61 ssnrtdpigg clqprcgdgt efqgcyatvs enltsytakm ipftnesngr nactsafmfs
      121 vgnfghfsfp rdinissthv pailewktfd pklkvplrks dcaekcgnid ilypfgiedr
      181 cymndafrvs ceetidgskp fissinltlv dvkfsegrvi innsitysnc nnhqndhkkg
      241 vsvnltntpf yfsdifnrfg svgcgnfati yhnqtddpig gclqpscnsn anlstndmci
      301 tsipprldtf aasltkkyrs ydgnrscrsa fvfdmdsldn dglltvphtk ghvatslqwg
      361 kplpapcklk dgkktfcnse ghycwswlsr ellcvcsdsd yasaysvdvc eepgkcensk
      421 rrycnmlcln apgnycsltc pegykysdee yrckliktns splpgrtrnl iiiigcstsi
      481 gtifallciw rlfkalerrn diklkqkyfk rngglllqqq lssnegnvek iklfaskele
      541 katdyynenr ilgrggqgif ykgmltdgsi vaikrsklve kkvleemkle qfineviils
      601 qinhrnvvkl lgccletnvp llvyefipng tlsdlihkpn eefpltwemr lristeiana
      661 lfylhsaasv piyhrdikss nillddkyra kvsdfgisrs vaieqthvtt rvhgtlgyld
      721 peyfrsnqyt eksdvysfgv vlvelltgqk pisssqsgeq rgslvtfflh smkenslfdi
      781 fdpqvmnegp reeviavswl akrclninrn krptmkqvam elerirtsde tnvlqeqsdd
      841 eedyeimddv tdpwgisscs tmviidni
//
LOCUS       XP_016722829             379 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016722829
VERSION     XP_016722829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..379
                     /product="wall-associated receptor kinase 5 isoform X1"
                     /calculated_mol_wt=41872
     Region          30..>74
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          255..316
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     CDS             1..379
                     /gene="LOC107934828"
                     /coded_by="XM_016867340.2:166..1305"
                     /db_xref="GeneID:107934828"
ORIGIN      
        1 mgirmvfyfi lqlpqliqsa spfeageagc ketcenvsip ypfgikrgcy hnswfrvtcn
       61 ktingtkpfi srinmellps ywpvednrvt vnnpvtylnc ddkgnngnts sssvnlqgsp
      121 fflseqnifg svgcgylait frnnqtdpia aclqqrcgdp issklpgclt mvpenltsyt
      181 tasrpmidii spgekesskr ctstfigdst vfseisidmt hvpatlewnp vkcdleaslc
      241 sivrphyvlp yktscnercg nvdipfpfgi kvgcyksewf rvtcnktadg ekpfissinm
      301 qllnisfyeg tvlvknsviy sycpgkdlen negsvnltgt pfffshifdr fmsigcgdla
      361 tfldsptndh riggcklpp
//
LOCUS       XP_040943943             293 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase-like 8 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943943
VERSION     XP_040943943.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088009.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..293
                     /product="wall-associated receptor kinase-like 8 isoform
                     X2"
                     /calculated_mol_wt=32383
     Region          30..>74
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          255..>287
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     CDS             1..293
                     /gene="LOC107934828"
                     /coded_by="XM_041088009.1:166..1047"
                     /db_xref="GeneID:107934828"
ORIGIN      
        1 mgirmvfyfi lqlpqliqsa spfeageagc ketcenvsip ypfgikrgcy hnswfrvtcn
       61 ktingtkpfi srinmellps ywpvednrvt vnnpvtylnc ddkgnngnts sssvnlqgsp
      121 fflseqnifg svgcgylait frnnqtdpia aclqqrcgdp issklpgclt mvpenltsyt
      181 tasrpmidii spgekesskr ctstfigdst vfseisidmt hvpatlewnp vkcdleaslc
      241 sivrphyvlp yktscnercg nvdipfpfgi kvgcyksewf rvtcnktadd scl
//
LOCUS       XP_016722821             987 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase-like 1 [Gossypium hirsutum].
ACCESSION   XP_016722821
VERSION     XP_016722821.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722821.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..987
                     /product="wall-associated receptor kinase-like 1"
                     /calculated_mol_wt=110320
     Region          45..>89
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          270..331
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          669..942
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(669..673,677,689,691,725,741..744,748,750,793,795,
                     797..798,800,811,814,831..834)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(669..673,677,689,691,725,741..744,748,793,795,
                     797..798,800,811)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(673,748,750,793,795,797,814,831..834)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(810..816,827..834)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..987
                     /gene="LOC107934819"
                     /coded_by="XM_016867332.2:186..3149"
                     /db_xref="GeneID:107934819"
ORIGIN      
        1 mtcdpakssq rteermgirm vfyfilqlpq liqsastfea geagcketce nvsipypfgi
       61 krgcyqnswf rvtcnkting tkpfisrinm ellpsywlve dnrvtvnnpv tylncddkgn
      121 ngttssssvn lqgspfflse qnifgsvgcg ylaiifrnnq tdpiaaclqq rcedhisskl
      181 pgcltmvpen ltsyttalrp mteiispgek esskrctstf vgdsnefsei sidmthvpat
      241 lewnpvkcdl easlcsmvrp nyalpyktsc nercgnvdip fpfgikvgcy ksewfrvtcn
      301 ktadgekpfi ssinmqllnv sfyegtvlvn nsviysycpg kdrennegsv nltgtpfffs
      361 hifdrfmsig cgnlatflds ptndhriggc klppcennmt sivrcavnip pglssfvtni
      421 rriypnngsk sscissfivd trfldslean sdhnatttnr sgtyvpttlq wgipkrglce
      481 lgeesgtlcs pdgrycwtsl sqmhlcvctp dtyndydyls tdvcqeigkc vdmkyrncfi
      541 hclnadgndc ssscpdryky lghmcrplnv ldssevptkk skrsqnlpvi igcstsigti
      601 vvligtwhmh klierrnnik lkqkyfkrng glllqqqlsn nkgnfekikl faskelekat
      661 dyynenrilg rggqgtvfkg mltdgsivai kkskmtedkk ldenelkqfi tevmilsqin
      721 hrnvvkllrc cletkvpllv yefvpngtls qllhvpneef pltwemrlri aieianslsy
      781 lhsaasvpiy hrdikssnil lddkyrakvs dfgtsrsval eqthvttrvq gtfgyldpey
      841 frssqfteks dvysfgvvli elitgqkpvs scqseevvrs lanfflhsmk ensllnivdp
      901 lvmndnaeee ivavaklakr clnlngkrrp tmkqvalele rirsseeang mqqsadedsd
      961 tdamiealgv dsfstsgsil kdsvtlk
//
LOCUS       XP_016722830             352 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase 1-like [Gossypium hirsutum].
ACCESSION   XP_016722830
VERSION     XP_016722830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867341.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..352
                     /product="wall-associated receptor kinase 1-like"
                     /calculated_mol_wt=38606
     Region          30..>76
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          251..>295
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     CDS             1..352
                     /gene="LOC107934831"
                     /coded_by="XM_016867341.2:39..1097"
                     /db_xref="GeneID:107934831"
ORIGIN      
        1 mgvsfvfyfi lqlpwlirpv tsleagdsgc setcgtvsip ypfgikrgcy aynnswfrvt
       61 cnetadgpkp fitrinlell gkfwldnkvv tinnpvtyln cgdkgdnsti spssvnlqgt
      121 pfffsnqhnt fgsigcgnla tvfrnnqidp iascvqhscg dpslgfggcy aliseqltsy
      181 ttsiaevknp agrkrcasaf lfdsnqlpsw kisintthvp ailewnpcdl eaalcfdvdk
      241 svalpykrdd csrscgnfdi sypfgiesgc ymnewfrvtc kettdgpkpy issinlqlvg
      301 argsssklqq daclaslvtc rrnkaensng flsktkngeh mdenllnsfl el
//
LOCUS       XP_016722848             976 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase-like 1 [Gossypium hirsutum].
ACCESSION   XP_016722848
VERSION     XP_016722848.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722848.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..976
                     /product="wall-associated receptor kinase-like 1"
                     /calculated_mol_wt=108959
     Region          30..>74
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          257..318
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          655..928
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(655..659,663,675,677,711,727..730,734,736,779,781,
                     783..784,786,797,800,817..820)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(655..659,663,675,677,711,727..730,734,779,781,
                     783..784,786,797)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(659,734,736,779,781,783,800,817..820)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(796..802,813..820)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..976
                     /gene="LOC107934848"
                     /coded_by="XM_016867359.2:58..2988"
                     /db_xref="GeneID:107934848"
ORIGIN      
        1 mgirmvfyfi lqlpclirpt spfeagetrc ketcgavaip ypfgiktgcy ynswfrvtcn
       61 ktvngtkpfi trinmellhs rwsfrdnvvt vnnpvtylnc ddkgnngtts pssvnlqgsp
      121 fffssehnsf gsvgcgylam ffrnnqtdpi alclqrgcee pissklagcl atvpenlasy
      181 ttalksmtei ispwekefsk rctsafmlgy stqlseisid mthvpatlew npvncdleas
      241 lcsivephhv lpyktscner cgnvdipfpf gikagcyksk wfrvtcnkta dgekpfissi
      301 nmqllnvsfy egtvlvnnsv iysncpgkdr ennegsvnlt gtpfffshif drfmsigcgn
      361 latflhsptn dhriggcklp pcennmtsiv rcavnipsgl ssfvaniiqi ypnngskrsc
      421 tsafivdtrf ldfpeansdh ndtttnrswt hvpttlqwgk tkrglcelge esgtlcspdg
      481 rycwtslsqm hlcvctsdny adydylstdv cqekgecvdt kykncfmlcl nadgnncssc
      541 pdgykysrle hlcrpvldss efptkkskrs qnlpviigcs tsigtvvvli gtwhmhklie
      601 rrnniklkqk yfkrngglll qqqlsnnkgn vekiklfasn elekatdyyn enrilgrggq
      661 gtvfkgmltd gsivaikksk mtedkklden ehkqfinevm ilsqinhrnv vkllgcclet
      721 kvpllvyefv pngtlsqllh vpseefpltw emrlriaiei analsylhsa asvpiyhrdi
      781 kssnillddk yrakvsdfgt srsvaleqth vttrvqgtfg yldpeyfrss qfteksdvys
      841 fgvvlvelis gqkpisscqs eevvrslanf flhsmkensl lnivdplvmn dnaeeeivav
      901 aklakrclnl ngkrrptmkq valelerirs seeanfvqqi adedsdmdem igasgfasfs
      961 tsgsylkdsa tlsida
//
LOCUS       XP_016722850             399 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S1 [Gossypium hirsutum].
ACCESSION   XP_016722850
VERSION     XP_016722850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="30S ribosomal protein S1"
                     /calculated_mol_wt=43556
     Region          <98..>283
                     /region_name="RpsA"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; COG0539"
                     /db_xref="CDD:440305"
     CDS             1..399
                     /gene="LOC107934850"
                     /coded_by="XM_016867361.2:112..1311"
                     /db_xref="GeneID:107934850"
ORIGIN      
        1 mpvstatlgs vsflsqlfnl dvsslscfvh htklstlysk psllrkpsss slyhlkvsas
       61 sasanpktdn sqqaeaavta ildnsvstde lkpapaparr sadwkaaray lhsgfiyggr
      121 vegfngggll vrfyslvgfl pfpqlspshs ckepnktihq iakglvgsil svkviqaeee
      181 srklifseke avwtkfstqi nvgdvfegkv gsvedygafv hlrfpdglyh ltglvhvsev
      241 swdlvqdvrd iltegddvrv kvvnidrgks rltlsikqle edplletldk vipqdgsads
      301 dslttsnsst ieplpgldai fkellqedgi ndvrisrqgf ekrvvsqdlq lwlsnappsd
      361 nmftllarag rqvqeiqlat sldqegikka lqrvlervp
//
LOCUS       XP_040943944             399 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S1 [Gossypium hirsutum].
ACCESSION   XP_040943944
VERSION     XP_040943944.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088010.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="30S ribosomal protein S1"
                     /calculated_mol_wt=43556
     Region          <98..>283
                     /region_name="RpsA"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; COG0539"
                     /db_xref="CDD:440305"
     CDS             1..399
                     /gene="LOC107934850"
                     /coded_by="XM_041088010.1:112..1311"
                     /db_xref="GeneID:107934850"
ORIGIN      
        1 mpvstatlgs vsflsqlfnl dvsslscfvh htklstlysk psllrkpsss slyhlkvsas
       61 sasanpktdn sqqaeaavta ildnsvstde lkpapaparr sadwkaaray lhsgfiyggr
      121 vegfngggll vrfyslvgfl pfpqlspshs ckepnktihq iakglvgsil svkviqaeee
      181 srklifseke avwtkfstqi nvgdvfegkv gsvedygafv hlrfpdglyh ltglvhvsev
      241 swdlvqdvrd iltegddvrv kvvnidrgks rltlsikqle edplletldk vipqdgsads
      301 dslttsnsst ieplpgldai fkellqedgi ndvrisrqgf ekrvvsqdlq lwlsnappsd
      361 nmftllarag rqvqeiqlat sldqegikka lqrvlervp
//
LOCUS       XP_040943945             255 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943945
VERSION     XP_040943945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088011.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..255
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28745
     Region          12..38
                     /region_name="DUF4219"
                     /note="Domain of unknown function (DUF4219); pfam13961"
                     /db_xref="CDD:433608"
     Region          75..204
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..255
                     /gene="LOC121214414"
                     /coded_by="XM_041088011.1:205..972"
                     /db_xref="GeneID:121214414"
ORIGIN      
        1 mgdviqlqvp qltktnygnw sirmkallgs qdcweivekg yiepgdaate aalsndakka
       61 lrearkkdqk alnsifqgmd estfekisdv knaknaweil qksfqgveka kkvrlqslra
      121 efemlkmkss eniddyanrv ksvvnemkrn getldevrvm ekilwsltrk feyvvvaiee
      181 skdlskmsle elvgslqahe qkmklnedse nldqalhskl siddgetsnn fnqgrgnrrg
      241 yrggyrggnr ggrgs
//
LOCUS       XP_016722817             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABA5e [Gossypium hirsutum].
ACCESSION   XP_016722817
VERSION     XP_016722817.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722817.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..215
                     /product="ras-related protein RABA5e"
                     /calculated_mol_wt=24027
     Region          9..173
                     /region_name="Rab11_like"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; cd01868"
                     /db_xref="CDD:206660"
     Site            9..13
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206660"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206660"
     Site            order(20..26,37,40,43,69,124..125,127,154..156)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206660"
     Site            order(26..37,39..42)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206660"
     Site            order(36,41..49)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206660"
     Site            order(41,45..52,59,61)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            43
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206660"
     Site            order(44,46..48,63,65,72..73,76,80,82..85,172)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     Site            order(44..45,47,65..66,73,75,77..79)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            44..48
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206660"
     Site            61..65
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206660"
     Site            66..69
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206660"
     Site            order(69,71..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206660"
     Site            72..77
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206660"
     Site            80..84
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206660"
     Site            89..94
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206660"
     Site            117..121
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206660"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206660"
     Site            154..156
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206660"
     Site            170..173
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206660"
     CDS             1..215
                     /gene="LOC107934815"
                     /coded_by="XM_016867328.2:250..897"
                     /db_xref="GeneID:107934815"
ORIGIN      
        1 msddetveey lfkiviigds avgksnllsr farnefnahs ketigvefqt qsveidgkev
       61 kaqiwdtagq erfravtsay yrgafgallv ydisrratfd nvarwldeln shsdttvakm
      121 lvgnkcdlen trevsldegk slaeseglff ietsaldstn vwtafeivir eiynnvsrkv
      181 lssdsykarl svnrvslvnd delkqsktky accss
//
LOCUS       XP_016722857             441 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH62 [Gossypium hirsutum].
ACCESSION   XP_016722857
VERSION     XP_016722857.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722857.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..441
                     /product="transcription factor bHLH62"
                     /calculated_mol_wt=48328
     Region          256..341
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(271..272,275..276,278..279,283,301..302)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(281..282,285,288..289,292,302..303,306..307,310,313,
                     316..317,320,323..324,326..327,330,333..334,337,340..341)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..441
                     /gene="LOC107934855"
                     /coded_by="XM_016867368.2:483..1808"
                     /db_xref="GeneID:107934855"
ORIGIN      
        1 mekdkafmse elknrtttrq qqpawnpcgf mtemstneln cgteqggnyf fnpnwdnsmd
       61 qsdpfesals smvsspaasn vgsgenvmmr eligklwnic nskdiitnst nascystpln
      121 sppfstdpgf aeraarfscf gglndplrds lklsghvngt qtiknstlsr ssspenaesg
      181 vskeessvse qlpggnnkkr ksiprgkake tpspatvdak vaaenndesn akrskqngtv
      241 kasnkedskp peppkdyihv rarrgqatds hslaervrre kisermkflq dlvpgcnkvt
      301 gkavmldeii nyvqslqrqv eflsmklatv nprmdvnmet llskdmfqsr gllphavysm
      361 eptfpfgyqp qqglalnngi anttsqqgfq lpqvngfidg npqvgsiwed dlqsivqmgf
      421 gqnqaqcyqg siapgqvkie l
//
LOCUS       XP_016722858             125 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine proteinase inhibitor B [Gossypium hirsutum].
ACCESSION   XP_016722858
VERSION     XP_016722858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="cysteine proteinase inhibitor B"
                     /calculated_mol_wt=13620
     Site            order(23,80..82,84)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          28..122
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
     CDS             1..125
                     /gene="LOC107934856"
                     /coded_by="XM_016867369.2:1..378"
                     /db_xref="GeneID:107934856"
ORIGIN      
        1 makaevvivl slllvitvvd glggrmrind vknnkevqel grfsveeynr rsqgrlrfsl
       61 anggpstalv fsqvvgaekq vvagikyylk ikamqggvtk tfesvvlvkp wvqskdllnf
      121 spsth
//
LOCUS       XP_016722854             772 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein SEC23 [Gossypium hirsutum].
ACCESSION   XP_016722854
VERSION     XP_016722854.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..772
                     /product="protein transport protein SEC23"
                     /calculated_mol_wt=85021
     Region          4..772
                     /region_name="PLN00162"
                     /note="transport protein sec23; Provisional"
                     /db_xref="CDD:215083"
     CDS             1..772
                     /gene="LOC107934852"
                     /coded_by="XM_016867365.2:230..2548"
                     /db_xref="GeneID:107934852"
ORIGIN      
        1 msemantdpe gidavrmtwn vlprtkveas acviplavsi apirshpdip tlpyaplrck
       61 scssalnafa rvdftakiwi cpfcyqrnhf pphyamiset nlpcelypqy ttvqyslqan
      121 pdpnnpsnvp qlppvfvfvl dtcmieeelg fvksamkqal gllpehalvg fvsfgtqaha
      181 helgfsdisk vyvfrgdkei skeqvleqlg lgsagrrpta gypkglqngh sntgvnrfll
      241 pasdceytln slldelqtdq wpvqpgnras rctgvalsva tgllgacmpg tgariialvg
      301 gpctegpgti vskdlsepvr shkdldkdaa pyfkkavrfy dslakqlvsq ghvldlfasa
      361 ldqvgvaemk vavertgglv vlaesfghsv fkgsfrrmfk dgeqslglcf nglleincsk
      421 dikiqgvigp ctslekkgpn vsdtvigegn tsawkmcgld kstwltvlfd vsstersnap
      481 gtansqlylq fltsyqdpeg krmlrvttlt rqwvdsavss eelvhgfdqe aaavvmarvt
      541 slkmemedgf datrwldrnl irvcskfgey rkddassftl npcfslfpqf mfnlrrsqfv
      601 qvfnnspdet ayfrmllnre nitnaavmiq pslisysfns lpqpalldva sisadrilll
      661 dayfsivifh gmtiaqwrnm gyqsqpehqa fsqllqaphv daqmilqerf pvprlvvcdq
      721 hgsqarflla klnpsatynn sidmaagsdv iftddvslqi ffehlqklav qs
//
LOCUS       XP_016722836            1305 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PUTATIVE RECOMBINATION INITIATION DEFECT 1 [Gossypium
            hirsutum].
ACCESSION   XP_016722836
VERSION     XP_016722836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867347.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1305
                     /product="protein PUTATIVE RECOMBINATION INITIATION DEFECT
                     1"
                     /calculated_mol_wt=145423
     CDS             1..1305
                     /gene="LOC107934837"
                     /coded_by="XM_016867347.2:51..3968"
                     /db_xref="GeneID:107934837"
ORIGIN      
        1 mmfedpqepd isfaadhfpd qepdviqcsq ghrttlslrt qqggsicllc lsnlisnpra
       61 ptlhvsyvls qlsdalsqpl fltsllsfhp hflispllha lssfdddpia qqlidiisal
      121 casandsvta dfiaqvaekl ssgalawsrr qlymlhclgi llncqindpc mhirdkealv
      181 snlvaglqlp sdeirgeilf vlyklsiqgy asrdglganv lqafcpsllr lsmeallktq
      241 rddvrlngva flmllaqigl fgnghgnein slssdeadhl mqtledglde fplsvlfaea
      301 ikgpllssds qvqistldli fhyltrgdas pkqiqiliee nivdyvfeil rlseckdplv
      361 yscvrvlnlf pcteqsfrqr liigfqtlip vlryvaevpf hpaqtftlml iqncvsdcpg
      421 iastsnieel alilsrmler hrdgeigmip etfllvcsif vallkfpssq gasnlpallq
      481 eslkhavlac ltisekdpgq llhclyllke aysysheacs antstnlelr tcivdictsh
      541 ilpwfsmavn eldeetvmgv fetfhfiliq hpdiqatela kvllssswfc fsfgclglfp
      601 aekmkwrvyl mlsslvevll gnqagqpird avfslpsdpi dllfllgqkn shdldlsscq
      661 davllllhfs clhddwlade isvlasleqy ilvnsgdfls gsidslammq vlnlyglcrg
      721 lakasnqvsh sleaerilfh mlcrsewdlp savihpvavr wlfqqekisk pltcqllkfc
      781 rrdfsdgnki lihrdnshti dvrviadlva rrdnhaakll mcllvelaee gaqnqdikav
      841 vnllltvini fpaasdqlcl hgignailmv vyynsshsss selllailll lfnilstvhh
      901 etlsdgeswl alstklidcl ipavrkygwn heglllvgil slilhhsssh alieasksii
      961 fnaslistin stvqvvsskg paliehdegt ssgenlifll llyyftlrcf havlpevpew
     1021 etflkspdma qpvsiinihf hdlcrmihfg spmvklvass clleflsgis yqkkgkhves
     1081 qcfmgyimsi mtvlegqvfn ddirvamncc lclsiilgwe kelemqesrv arsswyrliv
     1141 eemamslavp clasksfiny hkpavhltva llklekipgw irtvfddvsi sciienlkvm
     1201 dvtpemvllf rallnsgflk aehiaslnhv fqacrkrmyn nskghttdkh dqksvtwsdd
     1261 vgeiceylih lmvsssdtns gnkrlfqeie mffrslteeg niaqp
//
LOCUS       XP_040943947             394 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943947
VERSION     XP_040943947.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088013.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..394
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45479
     Region          16..65
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          106..151
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          268..315
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..394
                     /gene="LOC121203237"
                     /coded_by="XM_041088013.1:359..1543"
                     /db_xref="GeneID:121203237"
ORIGIN      
        1 mvhkrcttlp riikskwhdh rlfhkyflpd evrssdciic hnevnpkhgs yccshcnitf
       61 hvrcvtedkg lysivslene dempnessii vierndagea tkikhfkhmh nltlgpfdgg
      121 ygnscngcml pitdpcyycs ecvfflhktc aelpkmmnvw yhycqeplal isdkvfgcae
      181 cwlisnafay eccgceanic lrcvialtpg artslkhkhp lfyyrrqrek cnacgtanvg
      241 vfcckdcnfv ldlrcfslpi karhkcdehl lslmdhddns yskshhcdic ensrhpnhwf
      301 yhcatcdtsa hvgcvlrrny pflklgniye gtdhphplti vkkkyyypnc dkyskpcedm
      361 alecskseck yiahwncvks islwvglkrh fiyk
//
LOCUS       XP_016722815             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722815
VERSION     XP_016722815.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867326.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18652
     CDS             1..166
                     /gene="LOC107934813"
                     /coded_by="XM_016867326.2:32..532"
                     /db_xref="GeneID:107934813"
ORIGIN      
        1 mgflfsarvr npaweprrhp pffprnated dgqrhaeqra salyhrnrre enekkkkkps
       61 sslvstrlrr qrsglrrrdr gaqarrlvig eqrrgagegl qtcgaigfas vlngvyfglg
      121 flhflglgil fsdlghirpa smdcgllfil fylalgptnl gfyvni
//
LOCUS       XP_040943948             342 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943948
VERSION     XP_040943948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088014.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..342
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38907
     Region          251..294
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..342
                     /gene="LOC107934817"
                     /coded_by="XM_041088014.1:156..1184"
                     /db_xref="GeneID:107934817"
ORIGIN      
        1 mlgeetkeeg dmeesnnyrh qhplllilnq dqlihnqsgv tdctrcgekv sapcfscaeh
       61 cgfflhkvca eaplelnhpl hplllmqnap yssggyicdf cdkedtkfvy hcscgldfhi
      121 kcalftfnia ennlkelehv plqdpliste ngdveledvs kcfgclepla kythfspdcg
      181 fnlhekcakl pfklnhmlhr ehplvlqfns erlsckiclv trrsrfvygc spckiaihve
      241 caspspiied kshphpftlf prrlpficda cgvegnyaay icctcniivh kecislpcii
      301 iskwhdhriy hkyflprdfr nsdcdichge vnivilhfmp vv
//
LOCUS       XP_040943949             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943949
VERSION     XP_040943949.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088015.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38204
     Region          244..287
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..335
                     /gene="LOC107934842"
                     /coded_by="XM_041088015.1:1..1008"
                     /db_xref="GeneID:107934842"
ORIGIN      
        1 meesnnyghq hplllmlnqe qlinygsgva dcsrcgeevs apcfccaehc gfylhkvcae
       61 aplelnhpfh hdhplrlmqn apyssagdyi cdfcdkgdnk fvyhcscgld fhikcalftf
      121 niaennlkel ehvplqdpli stengdeele gvskcfgcre pltkythfsp dcgfnlhekc
      181 aklpfklnhm lhrehplvlq fnserlscki clvtrrrefv ygcspckiai piecalpspi
      241 iedkshphpf tlfprrlpfi cdacgvegny asyicctcni ivhkecislp ciiiskwhdh
      301 riyhkyflpr dfrnsdcdic hgevnivilh fmpvv
//
LOCUS       XP_040943950             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943950
VERSION     XP_040943950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088016.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38204
     Region          244..287
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..335
                     /gene="LOC107934842"
                     /coded_by="XM_041088016.1:1..1008"
                     /db_xref="GeneID:107934842"
ORIGIN      
        1 meesnnyghq hplllmlnqe qlinygsgva dcsrcgeevs apcfccaehc gfylhkvcae
       61 aplelnhpfh hdhplrlmqn apyssagdyi cdfcdkgdnk fvyhcscgld fhikcalftf
      121 niaennlkel ehvplqdpli stengdeele gvskcfgcre pltkythfsp dcgfnlhekc
      181 aklpfklnhm lhrehplvlq fnserlscki clvtrrrefv ygcspckiai piecalpspi
      241 iedkshphpf tlfprrlpfi cdacgvegny asyicctcni ivhkecislp ciiiskwhdh
      301 riyhkyflpr dfrnsdcdic hgevnivilh fmpvv
//
LOCUS       XP_040943951             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943951
VERSION     XP_040943951.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088017.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38204
     Region          244..287
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..335
                     /gene="LOC107934842"
                     /coded_by="XM_041088017.1:1..1008"
                     /db_xref="GeneID:107934842"
ORIGIN      
        1 meesnnyghq hplllmlnqe qlinygsgva dcsrcgeevs apcfccaehc gfylhkvcae
       61 aplelnhpfh hdhplrlmqn apyssagdyi cdfcdkgdnk fvyhcscgld fhikcalftf
      121 niaennlkel ehvplqdpli stengdeele gvskcfgcre pltkythfsp dcgfnlhekc
      181 aklpfklnhm lhrehplvlq fnserlscki clvtrrrefv ygcspckiai piecalpspi
      241 iedkshphpf tlfprrlpfi cdacgvegny asyicctcni ivhkecislp ciiiskwhdh
      301 riyhkyflpr dfrnsdcdic hgevnivilh fmpvv
//
LOCUS       XP_016722807             537 aa            linear   PLN 06-AUG-2024
DEFINITION  berberine bridge enzyme-like 8 [Gossypium hirsutum].
ACCESSION   XP_016722807
VERSION     XP_016722807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..537
                     /product="berberine bridge enzyme-like 8"
                     /calculated_mol_wt=60957
     Region          79..>274
                     /region_name="GlcD"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; COG0277"
                     /db_xref="CDD:440046"
     Region          475..533
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
     CDS             1..537
                     /gene="LOC107934807"
                     /coded_by="XM_016867318.2:108..1721"
                     /db_xref="GeneID:107934807"
ORIGIN      
        1 mkslhdclpl lfvvvfslsw vnasansndy fldclssyhp deftsfskvi ytetnssysa
       61 vlesstrnpr fstpntpkpl vivtpsnish vqatihcskk hglqirtrsg ghdfeglsyv
      121 sqvpfvvidl vhfrsidvdv kkeeawiqsg aitgevyyri nerttnltfp galchtvgig
      181 gfisgggygf lfrkyglaad nvidaqfvda ngrvlhrrlm gedlfwairg ggggsfgivl
      241 swkvklvhvp stvtvfsvgr tleqnatqll hrwqyvapnl pndvyslvsi ssmnstenge
      301 rtvlatftsv fqgvadelip lmqerfpelg llkedyiemt wiesilfwnq lsnetseill
      361 drsnrnslvp lsyksksdyv rkpmpeialq glwsrllevn etstavvnii syggkmdeip
      421 etetpfphrk gtlykinyni vwqeeensnp qryiswmrtl ysymgpfvsk spraayvnyr
      481 dldigrnndd gktrykqasv wgrkyfknnf drlvyvktki dpenffkheq sipprfh
//
LOCUS       XP_040943952             357 aa            linear   PLN 06-AUG-2024
DEFINITION  berberine bridge enzyme-like 13 [Gossypium hirsutum].
ACCESSION   XP_040943952
VERSION     XP_040943952.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088018.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="berberine bridge enzyme-like 13"
                     /calculated_mol_wt=40319
     Region          <13..346
                     /region_name="GlcD"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; COG0277"
                     /db_xref="CDD:440046"
     Region          295..353
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
     CDS             1..357
                     /gene="LOC121214416"
                     /coded_by="XM_041088018.1:403..1476"
                     /db_xref="GeneID:121214416"
ORIGIN      
        1 mggfisgggd gllsrkygla adnvidaqfv dasgrvldrr smgkdlfwai rgggggsfgi
       61 vlswkiklvh vpsivtvfsv grtleqnatq llhrwqyvap nlpndvyslv aisawkasen
      121 etrtvlvtfs svfqgganel iplmqerfpe lglvkedfie mtwtksvlfi nglsnetsea
      181 llernrsllp psfksksdfv hepvpeialq glwpqllevd eaisahqtfi ayggmmdeis
      241 etetpfphrk gtlykihyni gwqeeenirs qryiswmrkl ysfmgpfvsk spraayvnyr
      301 dldigrnndd gkasykqasv wgrkyfknnf drlvsvktki dpenffkheq sipphfh
//
LOCUS       XP_016722808             535 aa            linear   PLN 06-AUG-2024
DEFINITION  cannabidiolic acid synthase-like 2 [Gossypium hirsutum].
ACCESSION   XP_016722808
VERSION     XP_016722808.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867319.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722808.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="cannabidiolic acid synthase-like 2"
                     /calculated_mol_wt=60129
     Region          79..524
                     /region_name="GlcD"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; COG0277"
                     /db_xref="CDD:440046"
     Region          473..531
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
     CDS             1..535
                     /gene="LOC107934808"
                     /coded_by="XM_016867319.2:32..1639"
                     /db_xref="GeneID:107934808"
ORIGIN      
        1 mkslyrslpl lfvvvcslsw vnvsanshdd fldclssyhp dqsssiskvt ytetnssysa
       61 vlessirnhr fstpntpkpl vivtplnith vqatircskk hglqirtrsg ghdyeglsyv
      121 shvpfvvidl vhfksvevdv eneevwvqsg aivgevyyri nerstnltfp gahgytvgig
      181 gfisgggdgl lsrkyglaad nvidaqfvda sgrvldrrsm gedlfwavrg ggggsfgivl
      241 swkiklvhvp sivtvfsvgr tleqnatqll hrwqyvapnl pndvyslvai sawkasenet
      301 rtvlvtftsv fqgganelip lmqerfpelg lvkedfiemt wiesvlfing lsnetseall
      361 ernrsllpps fksksdyvne pvpeialqgl wpqllevdea isavqtfiay ggmmdeiset
      421 etpfphrkgt lykihynigw qeeenirsqr yiswmrklys ymgpfvsksp raayvnyrdl
      481 digrnnddgk asykqasvwg rkyfknnfdr lvsvktkidp enffkheqsi pphfh
//
LOCUS       XP_016722823             540 aa            linear   PLN 06-AUG-2024
DEFINITION  berberine bridge enzyme-like 8 [Gossypium hirsutum].
ACCESSION   XP_016722823
VERSION     XP_016722823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016867334.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..540
                     /product="berberine bridge enzyme-like 8"
                     /calculated_mol_wt=60834
     Region          79..216
                     /region_name="FAD_binding_4"
                     /note="FAD binding domain; pfam01565"
                     /db_xref="CDD:426326"
     Region          475..533
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
     CDS             1..540
                     /gene="LOC107934823"
                     /coded_by="XM_016867334.1:52..1674"
                     /db_xref="GeneID:107934823"
ORIGIN      
        1 mkslhrslsl lfivacsllw vsasanshdd ffeclysyhp kesssitqvi ytetnssysa
       61 lldssirnqr fstpntpkpl vivtplnish vqatiycskk hgleirtrsg ghdfeglsyv
      121 shvpfvvidl vnlrsvdvdv eneeawvqsg atvgevyyri nerstnlsfp apvfrtvgig
      181 gsisgggdgs lfrkyglsad nvidaqlvda hgrvldrrsm gedlfwairg ggggsfgivi
      241 swkiklvhvp stvtfcsvgr tleqnatqll hrwqyvapnl pkdvysvvti sttnasengt
      301 ktvlatfisl fqgganefsl lmqerfpelg lvkedfiemt wveslllmng lsnetseill
      361 drsnrytilp pfvksksdyv repmpeialq glwlhllevd egglavqnff ayggimeeis
      421 etetpfphrk gtlykisyni awqeeennns qryiswmrkl ysymgpfvsk spreayvnyr
      481 dldigrnnyh gktsykqasi wgrkyfknnf drlvyvktkt dpknffkheq sippclhcts
//
LOCUS       XP_016722354             540 aa            linear   PLN 06-AUG-2024
DEFINITION  cannabidiolic acid synthase-like 2 [Gossypium hirsutum].
ACCESSION   XP_016722354
VERSION     XP_016722354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866865.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..540
                     /product="cannabidiolic acid synthase-like 2"
                     /calculated_mol_wt=60680
     Region          79..216
                     /region_name="FAD_binding_4"
                     /note="FAD binding domain; pfam01565"
                     /db_xref="CDD:426326"
     Region          475..533
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
     CDS             1..540
                     /gene="LOC107934434"
                     /coded_by="XM_016866865.2:46..1668"
                     /db_xref="GeneID:107934434"
ORIGIN      
        1 mkflhrslsl lfivvcslsw vtasanshdd fleclysyhp nesssitqvi ytetnssyla
       61 llnssirnqr fstpntpkpl vivtplnish vqatiycskk hgleirtrsg ghdfeglsfv
      121 spvpfavidl vnlrsvdvdv eneeawvqsg atvgevyyri nerstnlsfp aavfrtvgig
      181 gsisgggdgs lfrkyglsad nvidaqlvda ngrvldrrsm gedlfwairg ggggsfgivi
      241 swkiklvhvp stvtifsvgr tleqnatqll hrwqyvapnl pndvypvvti sttnasengt
      301 ktvlatfvsl fqgganefip lmqerfpelg lvkedfiemt wvesllfmng lsnetseill
      361 drsnrytilp pfvksksdyv repmpeialq glllhllevd eggtavqnfy ayggimdeis
      421 etetpfphrn gtlykisyvi awqeeennns qryiswmskl ysymgpfvsk spreayvnyr
      481 dldigsnnyy gktsykqasn wgrkyfknnf drlvyvktkt dpknffkheq sipprlhyst
//
LOCUS       XP_016722409             714 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722409
VERSION     XP_016722409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..714
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=78438
     CDS             1..714
                     /gene="LOC107934479"
                     /coded_by="XM_016866920.2:101..2245"
                     /db_xref="GeneID:107934479"
ORIGIN      
        1 meyskgiskk rkrpslhplm gtitrsksqi hihrnrsgks rtqsvgggnh rrpqpflkkp
       61 kksslaedss vgydlsikdl rlrrvfspss tdgvipncld gaenlgksev agdclaekkk
      121 gcengdfeef gqstppdaei lgvkqefern gsedmkihde ckekgfnedr ngincsiktv
      181 rrpcsqeklf ktpgsfsyrr llpylmdikk essgspimgh cqktekdfee ksmvgsnvee
      241 algdksaasd cfleghnsds vkelnmvlde smmtlfngev kkfelqcedp nsncssggvv
      301 ssdemladdd dddvakinve sscdaqslev ldqtlsmven kceagdynev ppssngdlqq
      361 seievndgea veqiedlngq clpmtrldsd mfksktdvek smnetpsdks ldtspknklv
      421 pysrlhpkls kipgsfsykr llpflidian dyscvpgkda gtgasnckss hvehsdrirl
      481 tvtaataigl qqeqatlgkn aaldanqrle etnpelvvep psvssiisak pvsyqlplet
      541 egdaiksivk canhvnqiea dsfgeasitp aipivglkkg ilkrnppgcr gictclncss
      601 frlhaersfe fsrnqmldae evaldlikel sflrnileks afgaakdqst mlinvvkeac
      661 kkaskaeeva ksrlgemnyd lnihcrmpcg qrprvrfasy leeqvipiad ssnk
//
LOCUS       XP_040943953             713 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943953
VERSION     XP_040943953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088019.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..713
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=78339
     CDS             1..713
                     /gene="LOC107934479"
                     /coded_by="XM_041088019.1:57..2198"
                     /db_xref="GeneID:107934479"
ORIGIN      
        1 meyskgiskk rkrpslhplm gtitrsksqi hihrnrsgks rtqsvgggnh rrpqpflkkp
       61 kksslaedss vgydlsikdl rlrrvfspss tdgvipncld gaenlgksev agdclaekkk
      121 gcengdfeef gqstppdaei lgvkqefern gsedmkihde ckekgfnedr ngincsiktv
      181 rrpcsqeklf ktpgsfsyrr llpylmdikk essgspimgh cqktekdfee ksmvgsnvee
      241 algdksaasd cfleghnsds vkelnmvlde smmtlfngev kkfelqcedp nsncssggvv
      301 ssdemladdd dddvakinve sscdaqslev ldqtlsmven kceagdynev ppssngdlqq
      361 seievndgea veqiedlngq clpmtrldsd mfksktdvek smnetpsdks ldtspknklv
      421 pysrlhpkls kipgsfsykr llpflidian dyscvpgkda gtgasnckss hvehsdrirl
      481 tvtaataigl qqeqatlgkn aaldanqrle etnpelvvep psvssiisak pvsyqlplet
      541 egdaiksivk canhvnqiea dsfgeasitp aipivglkkg ilkrnppgcr gictclncss
      601 frlhaersfe fsrnqmldae evaldlikel sflrnileks afgaakdqst mlinvkeack
      661 kaskaeevak srlgemnydl nihcrmpcgq rprvrfasyl eeqvipiads snk
//
LOCUS       XP_016722410             291 aa            linear   PLN 06-AUG-2024
DEFINITION  xyloglucan endotransglucosylase/hydrolase 2 [Gossypium hirsutum].
ACCESSION   XP_016722410
VERSION     XP_016722410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866921.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..291
                     /product="xyloglucan endotransglucosylase/hydrolase 2"
                     /calculated_mol_wt=32864
     Region          27..286
                     /region_name="GH16_XET"
                     /note="Xyloglucan endotransglycosylase, member of glycosyl
                     hydrolase family 16; cd02176"
                     /db_xref="CDD:185685"
     Site            order(37..38,59..60,90,92,94,104,106,108,121,123,133,135,
                     191,193,197..198)
                     /site_type="active"
                     /db_xref="CDD:185685"
     Site            order(104,106,108)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:185685"
     CDS             1..291
                     /gene="LOC107934480"
                     /coded_by="XM_016866921.2:66..941"
                     /db_xref="GeneID:107934480"
ORIGIN      
        1 mgsscnvvsm allaclvlns lvfvahggdf yqdfdltwgd rrgkifnggk llslsldrvs
       61 gsgfqskkey lfgridmqlk lvagnsagtv tayylssqgp thdeidfefl gnlsgdpyil
      121 htnvftqgkg nreqqfylwf dptrnfhtys iiwkpqhiif lvdntpirvf knaesigvpf
      181 pksqpmriys slwnaddwat rgglvktdwa kapftayyrn fnanacvwsg tssscaktns
      241 vsagawetne ldapgrrrlr wvqkyfmiyn yctdlkrfpq gvppeckrpr f
//
LOCUS       XP_040943954             250 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943954
VERSION     XP_040943954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088020.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..250
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28197
     CDS             1..250
                     /gene="LOC121214417"
                     /coded_by="XM_041088020.1:43..795"
                     /db_xref="GeneID:121214417"
ORIGIN      
        1 mtmiqglvls likdelglsa aiedlreenk hqvnnhkgnq vdrgdetdeg vdsskvetlq
       61 ispiyytlrd lmdlqdedid afsfrsvtvv dnasssrigy lrptneakpe vevslnlekq
      121 dteleaclll slpepsfrtw mepsgetdtt itpgpsdnkt trhepgsksk wknkikdaia
      181 kvtnswsakk qqqaapnidv vlyeidakgv lkmrwedekk whakpkrrpt scmccpkisr
      241 irdfaleehv
//
LOCUS       XP_016722393             168 aa            linear   PLN 06-AUG-2024
DEFINITION  CRIB domain-containing protein RIC4 [Gossypium hirsutum].
ACCESSION   XP_016722393
VERSION     XP_016722393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866904.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="CRIB domain-containing protein RIC4"
                     /calculated_mol_wt=18569
     Region          102..>135
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd00132"
                     /db_xref="CDD:238077"
     Site            order(104,107,110,112,115,132)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..168
                     /gene="LOC107934473"
                     /coded_by="XM_016866904.2:128..634"
                     /db_xref="GeneID:107934473"
ORIGIN      
        1 mkermerlvl pfttgcssqa svavgksppr kqkpepnyqn ltskqvvgee csskgrtkns
       61 fgwlalskpn isngihrlvr itvrsfsqlf vykdieeltt emeignptdv khvthigldg
      121 ttttnnspfk gwqdfssldh nfiafpsisl rqfemamaaq sqpgpliv
//
LOCUS       XP_040943956             505 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 [Gossypium hirsutum].
ACCESSION   XP_040943956
VERSION     XP_040943956.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088022.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..505
                     /product="UDP-glycosyltransferase 75C1"
                     /calculated_mol_wt=56765
     Region          37..499
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(51..52,54,206,209..210,214,241,319,395,397,399..400,
                     403)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(51,319,395,397,399..400)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            52
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..505
                     /gene="LOC107934474"
                     /coded_by="XM_041088022.1:321..1838"
                     /db_xref="GeneID:107934474"
ORIGIN      
        1 mnsshhyknp lisftnyskl vkreriihyp raavtimpqp hfivvtypaq ghinptlqfa
       61 khlirigvrv tyitsisasr rmtkvptaeg lsflpfsdgy ddgikpgddt dhylsefkrr
      121 gkdaiseyit ssenegkpit civyslclhw aaevarkhhi psallwiqpa tvfdiyyfyf
      181 ngyesaikaq adetnpkcsi klpglpplfp rdlpsfvias nvyqsalslf qeqmdvlaee
      241 pnakilintf dalehealna iekfktvgig plvpssffns kdaldnslrv dlfqsdskdy
      301 iqwldskpks avvyvsfgsi aalkkqqvee iaralissrr pflwvmrnrk drgeeekeed
      361 kltcreeleq fgmvvpwcsq vevlshpslg cfvthcgwns tleslvagvp mvafpqwtdq
      421 gtsakliedv wgtgvrvstn eegiverdei vrcldvvmgd dekgmevkkn vekwkglare
      481 aameggsmdm nlkafvddvs qgyck
//
LOCUS       XP_016722390             469 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 [Gossypium hirsutum].
ACCESSION   XP_016722390
VERSION     XP_016722390.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866901.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722390.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..469
                     /product="UDP-glycosyltransferase 75C1"
                     /calculated_mol_wt=52494
     Region          1..463
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(15..16,18,156,159..160,164,191,283,359,361,363..364,
                     367)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(15,283,359,361,363..364)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            16
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..469
                     /gene="LOC107934471"
                     /coded_by="XM_016866901.2:407..1816"
                     /db_xref="GeneID:107934471"
ORIGIN      
        1 msqphfllva spaqghinpt lqfakhlirv gvrvtfitci sarsrmtkvp taqgltflpf
       61 sdgyddgfql rddidhylse lrrrgkeais efltsseneg kpvtcivysl fnhwatevar
      121 khhipttllw iqpatvfdiy yfyfngyest ikaqadetnp krsiklpglp llatrdlpsf
      181 vtasnvyrwg psliqeqmdi ladesnpkil vntfdaleqe alnaienfnm igigplipss
      241 flnssdsldn slrtdlfqpd skdylqwlds kpksavvyvs fgsitvltkq qveeiarali
      301 ssrrpflwvv rnrkdggeee keedkltcre eleqvgmvvp wcsqvevlsh pslgcfvthc
      361 gwnstlesmv agvpvvafpq wtdqgtnakl iedvwgngvr vsaneegmle rdeivrcldl
      421 vmgddekgme vkknvekwkg lareasmegg smdmklkafv ddvaqggcn
//
LOCUS       XP_016722391             466 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 [Gossypium hirsutum].
ACCESSION   XP_016722391
VERSION     XP_016722391.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866902.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722391.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="UDP-glycosyltransferase 75C1"
                     /calculated_mol_wt=52245
     Region          1..460
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(15..16,18,156,159..160,164,191,283,356,358,360..361,
                     364)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(15,283,356,358,360..361)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            16
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..466
                     /gene="LOC107934472"
                     /coded_by="XM_016866902.2:163..1563"
                     /db_xref="GeneID:107934472"
ORIGIN      
        1 msqphfllvt ipaqghinpt lqfakhliri gvrvtfitci sarhrmtkvp taqgltflpf
       61 sdgyddgfqp gddvdrylse lrrrgkeais efitsgeneg kpvtcivytl fihwatevar
      121 khhiptallw iqpatvfdiy yfyfngyest ikaqadetnp krsiklpglp llatsdlpsf
      181 vtasnvyrwg psliqeqmdv ladeynpkil vntfdalehe tlnaienfnm vgigplipss
      241 flnsndsldn slrtdlfqsd skdyfqwlds kpksavvyvs fgsiavltkq qveeiarali
      301 ssrqpflwvv rnrkdggeee dkltcreele qfgrvvpwcs qvevlshpsl gcfvthcgwn
      361 stlesmvagv pvvafpqwtd qwtnaklied vwgngvrvsa neegmvecde ivrcldlvmg
      421 ddekgmevkk nvekwkglar easmeggsmd mklkafvddv aqagck
//
LOCUS       XP_016722357             469 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 [Gossypium hirsutum].
ACCESSION   XP_016722357
VERSION     XP_016722357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866868.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..469
                     /product="UDP-glycosyltransferase 75C1"
                     /calculated_mol_wt=52964
     Region          1..463
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(15..16,18,156,163..164,168,195,283,359,361,363..364,
                     367)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(15,283,359,361,363..364)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            16
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..469
                     /gene="LOC107934436"
                     /coded_by="XM_016866868.2:58..1467"
                     /db_xref="GeneID:107934436"
ORIGIN      
        1 msqphfllvt fpaqghinpt lqfakhliri gvrvtfitci sarrrmtkvp taqgltflpf
       61 sdgyddgfqp gddiehylse lrrrgkeais efitsseyeg kpvtcivytl fihwasevar
      121 khhipaallw iqpatvfdiy yfyfngyest ikvpvdetnp krsiklpglp llatrdlpsf
      181 vtasnvyrwa lslfqeqmdi ladesnpkil vntfdaleqe alnaienfnm vgigplipss
      241 flnsndsldn slrtdlfqsd skdyiqwlds kpksavvyvs fgsiavltkq qveeiarali
      301 ssrrpflwvv rnwkdgveee keedkltwre elerfgmvvp wcsqvevlsh pslgcfvthc
      361 gwnstlesmv agvpvvafpq wtdqgtnakl iedvwgngvr vsaneegmve rdeivrcldl
      421 vmgddekgme vkknvekweg lareasmegg smdmnlkafv ddvaqgcwk
//
LOCUS       XP_016722347             532 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 [Gossypium hirsutum].
ACCESSION   XP_016722347
VERSION     XP_016722347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..532
                     /product="UDP-glycosyltransferase 75C1"
                     /calculated_mol_wt=60244
     Region          61..523
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(75..76,78,216,223..224,228,255,343,419,421,423..424,
                     427)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(75,343,419,421,423..424)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            76
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..532
                     /gene="LOC107934429"
                     /coded_by="XM_016866858.2:314..1912"
                     /db_xref="GeneID:107934429"
ORIGIN      
        1 mvfhkiqkdl gifkfvspnv tlfqcfssfl ktlrfpflvt pnptfvkkdq vnylraavtt
       61 msqphfllvt fpaqghinpt lqfakhliri gvrvtfvtci sacrrmtkvp taqgltflpf
      121 sdgyddgfqp gddiehylse lrrrgkeais efitssendg ksvtcivytl fihwasevar
      181 khhiptallw iqpatvfdiy yfyfngyest ikapvdetnp krsiklpglp llatrdlpsf
      241 vtasnvyrwa lslfqeqmdv ladesnpkil vntfdalehe alnaienfnm vgigplipss
      301 flnsndsldn slrtdlfqsd skdyiqwlds kpksavvyvs fgsiavltkq qveeiarali
      361 ssrrpflwvv rnwkdgveee keedkltcre eleqfgmvvp wcsqvevlfh pslgcfvthc
      421 gwnstlesma agvpvvafpq wtdqrtnakl iedvwgngvr vsaneegmve rdeivrcldl
      481 vmgddkkgme vkknvekwkr lareaamegs sldmklkafv ddiaegylli de
//
LOCUS       XP_016731239             511 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016731239
VERSION     XP_016731239.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875750.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731239.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="UDP-glycosyltransferase 75C1 isoform X1"
                     /calculated_mol_wt=57992
     Region          62..508
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(76..77,79,231,234..235,239,266,342,418,420,422..423,
                     426)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(76,342,418,420,422..423)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            77
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..511
                     /gene="LOC107942101"
                     /coded_by="XM_016875750.2:259..1794"
                     /db_xref="GeneID:107942101"
ORIGIN      
        1 mnffphkiqk klgifkfvgp nvtlfqcfss fiktlrfpff tpnptfvkkd qvnylratvt
       61 tmsqpyfllv tfpaqghinp tlqfakhlir igvrvtfitc isarrrmskv ptaqgltflp
      121 fsdgyddgfq pgddidhyls efrrrgkeai sefitssene gkpvtcivyt lfihwaseva
      181 rkhhiptall wiqpatvfdi yyfyfngyet tfkaqadetn pqrsiklpgl pllatrdlpl
      241 talnvyrwal sliqekmdvl adesnpkilv ntfdalehea lnaienfnmv gigplipfsf
      301 lnsndsldns lrtdlfqsds kdylqwldsk pksavvyvsf gsiavltkqq veeiaralis
      361 srrpflwvvr nrkdggyeek eedkltcree leqfgmvvpw csqvevlfhp slgcfvthcg
      421 wnstlesmva gvpvvafpqw sdqgttakli edvwgngvrv saneegiver deivrcldlv
      481 mmddekgmev kknvekwkgl vtgaaihgye p
//
LOCUS       XP_040943957             465 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glycosyltransferase 75C1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943957
VERSION     XP_040943957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088023.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..465
                     /product="UDP-glycosyltransferase 75C1 isoform X2"
                     /calculated_mol_wt=52329
     Region          1..461
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(15..16,18,170,173..174,178,205,281,357,359,361..362,
                     365)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(15,281,357,359,361..362)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            16
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..465
                     /gene="LOC107942101"
                     /coded_by="XM_041088023.1:98..1495"
                     /db_xref="GeneID:107942101"
ORIGIN      
        1 msqpyfllvt fpaqghinpt lqfakhliri gvrvtfitci sarrrmskvp taqgltflpf
       61 sdgyddgfqp gddidhylse frrrgkeais efitsseneg kpvtcivytl fihwasevar
      121 khhiptallw iqpatvfdiy yfyfngyett fkaqadetnp qrsiklpglp llatrdlplt
      181 alnvyrwals liqekmdvla desnpkilvn tfdaleheal naienfnmvg igplipfsfl
      241 nsndsldnsl rtdlfqsdsk dylqwldskp ksavvyvsfg siavltkqqv eeiaraliss
      301 rrpflwvvrn rkdggyeeke edkltcreel eqfgmvvpwc sqvevlfhps lgcfvthcgw
      361 nstlesmvag vpvvafpqws dqgttaklie dvwgngvrvs aneegiverd eivrcldlvm
      421 mddekgmevk knvekwkgvs geaameggsl dinlkvfvdn vaqgc
//
LOCUS       XP_040943958             923 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040943958
VERSION     XP_040943958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088024.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..923
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=104377
     Region          59..103
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          88..>775
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          131..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..287
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          288..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          456..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..>891
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          603..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..687
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..711
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..734
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          735..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..808
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          809..832
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          833..856
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          857..880
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..923
                     /gene="LOC107942105"
                     /coded_by="XM_041088024.1:6..2777"
                     /db_xref="GeneID:107942105"
ORIGIN      
        1 metthlcinm lyarhnppsh ppnmntlhsl isslflfscf lslvlsfspp qthlpmqcld
       61 dqrapllqlq hhlyyapnft fsskfdlwdp ntdccswegv tcdayghvvg iglsyknlsg
      121 sfhsifdlhh lqhlnlagnn fnttlfsygf dklqnlthln lssscfhgqi pveisflkrl
      181 vsldlsnqys cylryytild pyrgvyyydp lpyelqqplk lenpnfktli knlrfltely
      241 ldgvnissqs akwcettslv lsnlrvlsls ncglkgplcs slsrlsflsk lildgnpisy
      301 lppnfleiss rlvslslryc nlrghfptgi llspkiqsid islnfqlmgq lpefpannal
      361 qslslfytnf sgklpqsign lkfltnlklf scnffgpips sianlshlvn ldlssnklsg
      421 sihsslftlp slkilhlgdn qlvgkinefp nasssliqal dvssnsltgp ipksilqlpr
      481 lerlyigens fssmkldmfv qiknlkrlyl snvslliesd nksltfpqle glelrscnlt
      541 efpefikrqd klvdldlsnn hihgvvpnwl wksslsslhl sfnvidfpkq ltlsdsnfsf
      601 pmlrelsles cnlsafpefl ksqenvghle lsnnkisgai pnwvwkkslr ylflannhls
      661 sldqllpnqs stssqtsltr picnlsqlrn fnashnnlsg tipnclgkmn dlylldlqgn
      721 nfsgmlpkfs katqlyilkv senrlegklp rslakctqlk vldvgsnmin dtfpfwlekl
      781 palqvlilre nrfygqikhf khksifptld aldiasnqfs gelsidflqp trlrslkigg
      841 nklegklsrs lanctalevl dlgnnmvhdt fpfwleklps lkvlvlranr fygtisknry
      901 rtwvskathi ghcfqqffrr lvh
//
LOCUS       XP_040943959             923 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040943959
VERSION     XP_040943959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088025.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..923
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=104377
     Region          59..103
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          88..>775
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          131..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..287
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          288..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          456..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..>891
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          603..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..687
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..711
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..734
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          735..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..808
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          809..832
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          833..856
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          857..880
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..923
                     /gene="LOC107942105"
                     /coded_by="XM_041088025.1:6..2777"
                     /db_xref="GeneID:107942105"
ORIGIN      
        1 metthlcinm lyarhnppsh ppnmntlhsl isslflfscf lslvlsfspp qthlpmqcld
       61 dqrapllqlq hhlyyapnft fsskfdlwdp ntdccswegv tcdayghvvg iglsyknlsg
      121 sfhsifdlhh lqhlnlagnn fnttlfsygf dklqnlthln lssscfhgqi pveisflkrl
      181 vsldlsnqys cylryytild pyrgvyyydp lpyelqqplk lenpnfktli knlrfltely
      241 ldgvnissqs akwcettslv lsnlrvlsls ncglkgplcs slsrlsflsk lildgnpisy
      301 lppnfleiss rlvslslryc nlrghfptgi llspkiqsid islnfqlmgq lpefpannal
      361 qslslfytnf sgklpqsign lkfltnlklf scnffgpips sianlshlvn ldlssnklsg
      421 sihsslftlp slkilhlgdn qlvgkinefp nasssliqal dvssnsltgp ipksilqlpr
      481 lerlyigens fssmkldmfv qiknlkrlyl snvslliesd nksltfpqle glelrscnlt
      541 efpefikrqd klvdldlsnn hihgvvpnwl wksslsslhl sfnvidfpkq ltlsdsnfsf
      601 pmlrelsles cnlsafpefl ksqenvghle lsnnkisgai pnwvwkkslr ylflannhls
      661 sldqllpnqs stssqtsltr picnlsqlrn fnashnnlsg tipnclgkmn dlylldlqgn
      721 nfsgmlpkfs katqlyilkv senrlegklp rslakctqlk vldvgsnmin dtfpfwlekl
      781 palqvlilre nrfygqikhf khksifptld aldiasnqfs gelsidflqp trlrslkigg
      841 nklegklsrs lanctalevl dlgnnmvhdt fpfwleklps lkvlvlranr fygtisknry
      901 rtwvskathi ghcfqqffrr lvh
//
LOCUS       XP_040943960             923 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040943960
VERSION     XP_040943960.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088026.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..923
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=104377
     Region          59..103
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          88..>775
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          131..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..287
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          288..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          456..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..>891
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          603..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..687
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..711
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..734
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          735..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..808
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          809..832
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          833..856
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          857..880
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..923
                     /gene="LOC107942105"
                     /coded_by="XM_041088026.1:6..2777"
                     /db_xref="GeneID:107942105"
ORIGIN      
        1 metthlcinm lyarhnppsh ppnmntlhsl isslflfscf lslvlsfspp qthlpmqcld
       61 dqrapllqlq hhlyyapnft fsskfdlwdp ntdccswegv tcdayghvvg iglsyknlsg
      121 sfhsifdlhh lqhlnlagnn fnttlfsygf dklqnlthln lssscfhgqi pveisflkrl
      181 vsldlsnqys cylryytild pyrgvyyydp lpyelqqplk lenpnfktli knlrfltely
      241 ldgvnissqs akwcettslv lsnlrvlsls ncglkgplcs slsrlsflsk lildgnpisy
      301 lppnfleiss rlvslslryc nlrghfptgi llspkiqsid islnfqlmgq lpefpannal
      361 qslslfytnf sgklpqsign lkfltnlklf scnffgpips sianlshlvn ldlssnklsg
      421 sihsslftlp slkilhlgdn qlvgkinefp nasssliqal dvssnsltgp ipksilqlpr
      481 lerlyigens fssmkldmfv qiknlkrlyl snvslliesd nksltfpqle glelrscnlt
      541 efpefikrqd klvdldlsnn hihgvvpnwl wksslsslhl sfnvidfpkq ltlsdsnfsf
      601 pmlrelsles cnlsafpefl ksqenvghle lsnnkisgai pnwvwkkslr ylflannhls
      661 sldqllpnqs stssqtsltr picnlsqlrn fnashnnlsg tipnclgkmn dlylldlqgn
      721 nfsgmlpkfs katqlyilkv senrlegklp rslakctqlk vldvgsnmin dtfpfwlekl
      781 palqvlilre nrfygqikhf khksifptld aldiasnqfs gelsidflqp trlrslkigg
      841 nklegklsrs lanctalevl dlgnnmvhdt fpfwleklps lkvlvlranr fygtisknry
      901 rtwvskathi ghcfqqffrr lvh
//
LOCUS       XP_040943961            1013 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040943961
VERSION     XP_040943961.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088027.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1013
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=114629
     Region          66..110
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          95..>851
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          138..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          241..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          317..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          365..388
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..412
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          413..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          486..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          510..535
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          536..606
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..629
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          630..652
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          653..691
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..>1012
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          692..715
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          716..738
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          739..762
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          763..786
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          787..812
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          813..836
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          837..860
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          885..910
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          936..976
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          977..1000
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1013
                     /gene="LOC107944471"
                     /coded_by="XM_041088027.1:124..3165"
                     /db_xref="GeneID:107944471"
ORIGIN      
        1 mqycsmetth lcinmlyarh nppsqftptn mntlhsliss lflsscflpl llsfsppqth
       61 lpmqclddqr spllqlqhhl yyapnftfss nfdlwnvntd ccswegvtcd ayghvvgidl
      121 syknlsgsfh pifnlhrlqr lnlagnnfnt ilfsygfdkl qnlthlnlss scfhgqipve
      181 isflkrlvsl dlskqdsccl ryykvlysgf yiyfplpyel qqplklenpt fktliknlrf
      241 ltelyldsvd istqsakwce ttslvlsnlr vlslsncglk gplcsslsrl sflselildg
      301 npisylppnf leissrlvsl slrycnlrgh fptgillspk iqsidisand qlmgqlpefp
      361 annallslsl ydtnfsgklp qsignlkflt dlelyycnff gpipssianl shlvklyleg
      421 nklsgsihss lftlpslkil dlgenqlvgk idefpnasss sieilyignn yltgpipksi
      481 lqlpklellh irgnsfscmk ldmfvqlnnl rtllldnisl lmesnrsltf pqlgslmlrs
      541 cnltefpefi krqdklvhld lsnnhihgvv pnwlwkssls sldlsfnvid fpkklplsda
      601 nfsfpvlrgl slgscnisaf peflksqenl gylglsnnki sgaipnwvwk kslrylylan
      661 nhlssldqll pnqsstssqt sltrpicnls qikvfnashn nlsgtipncl gkmndlylld
      721 lqgnnfsgml pkfskanqls ilkvsenrle gklprslvec tllevldvgn nmmnhtfpfw
      781 lqklpyltvl ilrenrfygq ikhfkhkfvf pnldvldias nqfsgelsin flqatrlrsl
      841 kiggnklegk lsrslancka levldlgnnm vhdtfsfwle kltslkvlil ranrfygtit
      901 efntergfpk lrildigsnn fsgnlsiefl qslkammqlt nddkakldyi gedyyqdsvt
      961 ifnkgiemfy qkvltiltcl dlsnnsfhrr ipeeiqmlrs lkvlnlsdns fsd
//
LOCUS       XP_016722384             922 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like kinase TMK4 [Gossypium hirsutum].
ACCESSION   XP_016722384
VERSION     XP_016722384.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866895.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722384.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..922
                     /product="receptor-like kinase TMK4"
                     /calculated_mol_wt=99627
     Region          65..88
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <67..841
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          89..111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          112..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          185..207
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..410
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          579..853
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(579..583,587,599,601,632,648..651,655,657,702,704,
                     706..707,709,720,723,740..743)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(579..583,587,599,601,632,648..651,655,702,704,
                     706..707,709,720)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(583,655,657,702,704,706,723,740..743)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(719..726,737..743)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..922
                     /gene="LOC107934465"
                     /coded_by="XM_016866895.2:52..2820"
                     /db_xref="GeneID:107934465"
ORIGIN      
        1 mgnidhrhfl ypflllsavl caaddgaviv klasslsplp rgwsstssdn ycnwsgidcd
       61 ksdrvtfinl askslsgslp adistlselr tvllqhnsls gsipsfanls nlqniyldgn
      121 sftsvtpnaf fgltslqkls lsentklspw tfpdlsqsts lvevqldntn lygtlpdvfq
      181 slnslksirl synnlsgtlp aslagsmiqn lwinnqnvgf tgtldvlsnm tdllqvwvhk
      241 nmftgqipdl sksmgifdiq lrenlltgpv pgsltnlpsl knislsnnkl qgpfpkfpnt
      301 veniavngtn nfcnsngdpc dpqvttllei aggfgypvll sddwpgndac qwvfvpcdsq
      361 gnvitvnlkk knlvgtispa ianltklknl nlndnnltgs ipdgliklss lqlidvsnnn
      421 ltgdipkfsa svkfaysgni llgkssgsgg ggtsgsggss ggssgssksg sngknsvali
      481 vgivigvvvf vavvcfvsyk ylmnkkygkf gvmdgnasda ekgvvknram ngygglpsem
      541 qsqssgdhsd cyffedgnva isihvlrevt dnfseanilg rggfgivykg elqdgtqiav
      601 krmecaakgt kglnefqaei avltkvrhrh lvallgycin gnerllvyey mpqgtlgqhl
      661 fewrengyap ltwkqrvtia ldvargveyl hslaqqsfih rdlkpnnill tddmrakvad
      721 fglvknapeg kysletrlag tfgylapeya atgrvttkvd vyafgvvlme iitgrqaldv
      781 tlpdekshlv twfrrvlvnk dnipkvvdet incdneetma mifkvaelag hctarepyqr
      841 pdmghavnvl gplveqwkpt tqeddgntgi elnmslpqfl qkwqadegts tmysdfsyse
      901 tqtsipakps gfsatfsssd gr
//
LOCUS       XP_016722352             610 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016722352
VERSION     XP_016722352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..610
                     /product="pentatricopeptide repeat-containing protein
                     At4g14050, mitochondrial"
                     /calculated_mol_wt=68629
     Region          1..610
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          42..67
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          144..169
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          173..200
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          202..231
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          277..302
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          306..333
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          339..368
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..401
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          407..434
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          440..473
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..610
                     /gene="LOC107934432"
                     /coded_by="XM_016866863.2:434..2266"
                     /db_xref="GeneID:107934432"
ORIGIN      
        1 mpilhylhql qncakhrsiv stkqlhahfi rlgvtqflal sntllnvygk csllqdalql
       61 fdempqrdhv swatflttqn qanlpdktls mfpamfsldr llpddfvfas lvkacgslga
      121 ikqgkqvhgn flvspyfddd vvksslvdmy akcglpddsr lvfdsiklkn maswtaiiyg
      181 yarkgrkeea lelflrvplk nlfawtalis gliqsangvd afglfvkmrr qgisiidplv
      241 lssivgasan lamlelgkqv hglviqlgye scmfisnalv dmyakcsdms aardvfsrms
      301 rrdvvswtsi ivgaaqhgqa eealslydnm ilngvkpnev tfvgliyacs hvglvnrgre
      361 lfksmvedyg ihpslqhytc lldllgrsgh leeaesvinl mpfkpdeptw aallsackqy
      421 rnakmaikfa dhlfslkpee pstyillsnt yassglweha skarqllesl evrkepgysy
      481 iyfgkesqmf yagetshpmk dkifgllnel dvemrrrgyv pdtsyilhnt dhqekerqlf
      541 whserlaiay gllksvpgtv irivknlrvc gdchtvlkli sdivqreivv rdakryhhfk
      601 ggkcscndfw
//
LOCUS       XP_016722377             462 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glucan endo-1,3-beta-glucosidase A6 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722377
VERSION     XP_016722377.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866888.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722377.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="probable glucan endo-1,3-beta-glucosidase A6
                     isoform X1"
                     /calculated_mol_wt=51157
     Region          26..346
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          373..457
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..462
                     /gene="LOC107934459"
                     /coded_by="XM_016866888.2:57..1445"
                     /db_xref="GeneID:107934459"
ORIGIN      
        1 matallttil lssflvvssa eisskiginy grignnlpsp yrtietvksm nagriklyds
       61 dpeilkllsg tnihvsvmvq nndiiriass qavaeqwvqd nvlayypdtm irfvlvgnev
      121 lshqdrriwl slvpamrrik nslnthdikn ikvgtplamd vmqstfppss grfrpditdt
      181 vmapllrfln gtksfffidv ypylawsanp knisldfalf rsrvsqtdhg shlvytnlld
      241 qmldsvifam rklgypdirl aiaetgwptt gdidqigani nnaatynrkl vqkmtakppl
      301 gtparpgsvi ptfifslyde nqktgptter hwgllrsngt siyeidltgk rplssykplp
      361 aarnnvpykg kiwcevapga damnlslals yacgqgnqtc aalnpgkqcy epvsvfwhas
      421 yafssywarf rkqgatcnfn glarqtranp trghcsfpsv tl
//
LOCUS       XP_040943962             461 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glucan endo-1,3-beta-glucosidase A6 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943962
VERSION     XP_040943962.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088028.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..461
                     /product="probable glucan endo-1,3-beta-glucosidase A6
                     isoform X2"
                     /calculated_mol_wt=51086
     Region          25..345
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          372..456
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..461
                     /gene="LOC107934459"
                     /coded_by="XM_041088028.1:67..1452"
                     /db_xref="GeneID:107934459"
ORIGIN      
        1 matallttil lssflvvsse isskiginyg rignnlpspy rtietvksmn agriklydsd
       61 peilkllsgt nihvsvmvqn ndiiriassq avaeqwvqdn vlayypdtmi rfvlvgnevl
      121 shqdrriwls lvpamrrikn slnthdikni kvgtplamdv mqstfppssg rfrpditdtv
      181 mapllrflng tksfffidvy pylawsanpk nisldfalfr srvsqtdhgs hlvytnlldq
      241 mldsvifamr klgypdirla iaetgwpttg didqiganin naatynrklv qkmtakpplg
      301 tparpgsvip tfifslyden qktgptterh wgllrsngts iyeidltgkr plssykplpa
      361 arnnvpykgk iwcevapgad amnlslalsy acgqgnqtca alnpgkqcye pvsvfwhasy
      421 afssywarfr kqgatcnfng larqtranpt rghcsfpsvt l
//
LOCUS       XP_016722423             513 aa            linear   PLN 06-AUG-2024
DEFINITION  selenium-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016722423
VERSION     XP_016722423.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722423.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..513
                     /product="selenium-binding protein 2"
                     /calculated_mol_wt=57665
     Region          46..513
                     /region_name="SBP56"
                     /note="56kDa selenium binding protein (SBP56); pfam05694"
                     /db_xref="CDD:461716"
     CDS             1..513
                     /gene="LOC107934489"
                     /coded_by="XM_016866934.2:12..1553"
                     /db_xref="GeneID:107934489"
ORIGIN      
        1 mlfttklliq nlflkikffi fllvvcewre rereftmgee vgcckrtgpg ygtpleamsg
       61 pkealmyvtc vyngtgrekp dflatvdvdp nsptyskvih rlslpyigde lhhtgwnacs
      121 schgdpssnr rflilpslls griyvidtqk nhkapslhkv vepehiiekt glayphtshc
      181 langdiiisf lgdkdgnaqg ngfllldsqf nikgrwekpg rkaefsydfw yqprhktmic
      241 ssfgaplaft qgfnlkhved gfygrqlfvy dwpdgglkqt ldlgdnglis geirflhdpt
      301 kdtgyvecvl ssnvvrffkt qdgsswshev aisvkplkvq nwilpempgl iigllisvdd
      361 rflyfvnwfh gdvrqynied pknpilvgqv yvggllqkgs pitavtedgk twqadvpkiq
      421 ghslrggphm tqlsldgkrl yvtnslfstw drqfypdvie kgshmiqidv diengglkin
      481 pdffvdfgae pdgpclahem rypggdctsd iwi
//
LOCUS       XP_016722385             477 aa            linear   PLN 06-AUG-2024
DEFINITION  selenium-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016722385
VERSION     XP_016722385.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866896.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722385.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="selenium-binding protein 2"
                     /calculated_mol_wt=53085
     Region          10..477
                     /region_name="SBP56"
                     /note="56kDa selenium binding protein (SBP56); pfam05694"
                     /db_xref="CDD:461716"
     CDS             1..477
                     /gene="LOC107934466"
                     /coded_by="XM_016866896.2:97..1530"
                     /db_xref="GeneID:107934466"
ORIGIN      
        1 mgeevgcckr tgtgygaple amsgpkeali yvpcvyngtg rekpdflatv dvnpnsptys
       61 kvihrlsfpy igdelhhtgw nacsschgnp ssdrrflilp sllsgriyvi dtqknpkaps
      121 lhkvvepehi iektglayph tshclangdi iisflgdkdg naqgngflll dsqfnikgrw
      181 ekpgrkaefs ydfwyqprhk tmicssfgap laftqgfnlk hvedgfygrq lfvydwpdgr
      241 lkqtldlgdn glisgeirfl hdptkdtgyv ecvlssnvvr ffktqdgssw shevaisvkp
      301 lkvqnwilpe mpglivglli slddrflyfv nwfhgdvrqy niedpknpil vgqvyvggll
      361 qkggpitavt edgktwqadv pkiqghclrg gpcmtqlsld gkrlyvtnsl fstwdrqfyp
      421 dviekgshmi qidvdiesgg lkinpdffvd fgaepdgpcl ahemrypggd ctsdiwi
//
LOCUS       XP_016722386             476 aa            linear   PLN 06-AUG-2024
DEFINITION  selenium-binding protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016722386
VERSION     XP_016722386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866897.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..476
                     /product="selenium-binding protein 1 isoform X1"
                     /calculated_mol_wt=52930
     Region          7..475
                     /region_name="SBP56"
                     /note="56kDa selenium binding protein (SBP56); pfam05694"
                     /db_xref="CDD:461716"
     CDS             1..476
                     /gene="LOC107934467"
                     /coded_by="XM_016866897.2:281..1711"
                     /db_xref="GeneID:107934467"
ORIGIN      
        1 mgeeteccrt kgpgyetplk amsgpkeall yvtcvytgtg rekpdflatv dvdpnsptys
       61 kvihrlsmpy vgdelhhsgw nacsschgdp sadrrflilp slvsgrvyvi dtqknpkaps
      121 lqkvvqpedi vkntglayph tshclasgdi misclgdkdg nakgngflll dsefnvkgrw
      181 ekpghspmfg ydfwyqprhk tmissswgap vaftkgfdlq hvtdglygrh lhvyswpdge
      241 lkqtldlgdt glipletrfl hdpskdtgyv gcaltsnmvr ffktkdgsws hevaisvkpl
      301 kvqnwilpem pglitdflis lddrflyfan wlhgdvrqyn iedpknpvlv gqvwvggliq
      361 kgspvvamte dgktwqsdvp eiqghrlrgg pqmiqlsldg krlyvtnslf sawdrqfype
      421 llekgshmlq idvnteeggl ktnpnffvdf gaepdgpsla hemrypggdc tsdiwt
//
LOCUS       XP_016722387             474 aa            linear   PLN 06-AUG-2024
DEFINITION  selenium-binding protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016722387
VERSION     XP_016722387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..474
                     /product="selenium-binding protein 1 isoform X2"
                     /calculated_mol_wt=52772
     Region          7..473
                     /region_name="SBP56"
                     /note="56kDa selenium binding protein (SBP56); pfam05694"
                     /db_xref="CDD:461716"
     CDS             1..474
                     /gene="LOC107934467"
                     /coded_by="XM_016866898.2:237..1661"
                     /db_xref="GeneID:107934467"
ORIGIN      
        1 mgeeteccrt kgpgyetplk amsgpkeall yvtcvytgre kpdflatvdv dpnsptyskv
       61 ihrlsmpyvg delhhsgwna csschgdpsa drrflilpsl vsgrvyvidt qknpkapslq
      121 kvvqpedivk ntglayphts hclasgdimi sclgdkdgna kgngflllds efnvkgrwek
      181 pghspmfgyd fwyqprhktm issswgapva ftkgfdlqhv tdglygrhlh vyswpdgelk
      241 qtldlgdtgl ipletrflhd pskdtgyvgc altsnmvrff ktkdgswshe vaisvkplkv
      301 qnwilpempg litdflisld drflyfanwl hgdvrqynie dpknpvlvgq vwvggliqkg
      361 spvvamtedg ktwqsdvpei qghrlrggpq miqlsldgkr lyvtnslfsa wdrqfypell
      421 ekgshmlqid vnteegglkt npnffvdfga epdgpslahe mrypggdcts diwt
//
LOCUS       XP_016722388             476 aa            linear   PLN 06-AUG-2024
DEFINITION  selenium-binding protein 1 [Gossypium hirsutum].
ACCESSION   XP_016722388
VERSION     XP_016722388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..476
                     /product="selenium-binding protein 1"
                     /calculated_mol_wt=53022
     Region          10..476
                     /region_name="SBP56"
                     /note="56kDa selenium binding protein (SBP56); pfam05694"
                     /db_xref="CDD:461716"
     CDS             1..476
                     /gene="LOC107934468"
                     /coded_by="XM_016866899.2:122..1552"
                     /db_xref="GeneID:107934468"
ORIGIN      
        1 mgekmgcckr tgpgyatple amsgpketii yvnciyngtg rkkpdflatv dvdpnsptys
       61 kvihrlsmpy igdelhhsgw nacsschgdp sttrrflilp svvsgrvyvi dtqknpraps
      121 lhkvvesedi veqtglayph tshclasgdi misclgdkdg nakgngflll dsefnvkgrw
      181 ekpghsplfs ydfwyqprhk tmigsslgap atftrgfniq hvkdglyarh lhvyswpdge
      241 lkqtldlget gltplemrfl hdpckdtgyv gcaytsnivr ffktedgsws hevvisvkpl
      301 kvqnwilpel pgfitdilis iddrflyfin wlqgdirqyn iedpknpvlv gqvyvgglvq
      361 kgspvvavte dgktwqsnvp eiqghrlrgg pnmiqlsldg krlyatnslf stwdrqfype
      421 lvekgshmlq idvdtvkggl kinpnffidf gaepdgpcma hemrypggdc tsdiwi
//
LOCUS       XP_016722389             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722389
VERSION     XP_016722389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866900.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..305
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35447
     CDS             1..305
                     /gene="LOC107934470"
                     /coded_by="XM_016866900.2:86..1003"
                     /db_xref="GeneID:107934470"
ORIGIN      
        1 matakpenee lqavkskakk dpindliftm lqqnpnpesg iqqatksltc lneqlfritk
       61 tihekqfeer qaynrlydln ykekgfrsiw tnkgkqmaal krdldkltfa ngaykersin
      121 tqgkinshnl cfrmhhetgn mvkekkllke vnaglkglnd sgpsvveeis driwrlrwdi
      181 rrnyfirrpa irvdeqqvlk einelkward kafanapvkg kiwnslpskn vikqqikame
      241 ealneedrkq hmqirgeiev vkreingvkk siaslkrqll dvrrkkgeay kvilkliktq
      301 nqpic
//
LOCUS       XP_016722411             494 aa            linear   PLN 06-AUG-2024
DEFINITION  heat stress transcription factor A-5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722411
VERSION     XP_016722411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..494
                     /product="heat stress transcription factor A-5 isoform X1"
                     /calculated_mol_wt=55332
     Region          21..113
                     /region_name="HSF"
                     /note="heat shock factor; smart00415"
                     /db_xref="CDD:214654"
     CDS             1..494
                     /gene="LOC107934481"
                     /coded_by="XM_016866922.2:159..1643"
                     /db_xref="GeneID:107934481"
ORIGIN      
        1 mdptapsasv vggggggggg papflmktfd mvddsstddi vswssnkksf vvwnppdfar
       61 lllptyfkhn nfssfirqln tygfrkidpe rwefanedfv kdqrhllkni hrrkpihshs
      121 npqgslidhe ragyeeeiek lsrekaalea dvlrseqers alkhqveelt qqadqmerrq
      181 dtlfnfleka lqdpafaehl frriesmddv vaynkkrrlp qidqtkpvgd hslldnksss
      241 tpefgnvvhl dfsnklrlel ssavseinlv sqstqssned gespqrrvsq gepkddnirp
      301 qgllftpetl disdtgtsft fnmdssfsqr vsmnespavh slqqrlssne epdshiscql
      361 nltlassslq vnkspsltrm sqpsweigkv sesrsnansk dsdsgpfhns rnmidgettl
      421 ssskegpntn qepaaapvrv ndvfweqflt erpgssdnee assnyranpy eeqddkrsgh
      481 glarntknie qlsl
//
LOCUS       XP_040943963             420 aa            linear   PLN 06-AUG-2024
DEFINITION  heat stress transcription factor A-5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040943963
VERSION     XP_040943963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088029.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..420
                     /product="heat stress transcription factor A-5 isoform X2"
                     /calculated_mol_wt=47356
     Region          <9..39
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; cl12113"
                     /db_xref="CDD:472277"
     CDS             1..420
                     /gene="LOC107934481"
                     /coded_by="XM_041088029.1:139..1401"
                     /db_xref="GeneID:107934481"
ORIGIN      
        1 mssavihkgf rkidperwef anedfvkdqr hllknihrrk pihshsnpqg slidheragy
       61 eeeieklsre kaaleadvlr seqersalkh qveeltqqad qmerrqdtlf nflekalqdp
      121 afaehlfrri esmddvvayn kkrrlpqidq tkpvgdhsll dnkssstpef gnvvhldfsn
      181 klrlelssav seinlvsqst qssnedgesp qrrvsqgepk ddnirpqgll ftpetldisd
      241 tgtsftfnmd ssfsqrvsmn espavhslqq rlssneepds hiscqlnltl assslqvnks
      301 psltrmsqps weigkvsesr snanskdsds gpfhnsrnmi dgettlsssk egpntnqepa
      361 aapvrvndvf weqflterpg ssdneeassn yranpyeeqd dkrsghglar ntknieqlsl
//
LOCUS       XP_016722346             124 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RALF-like 31 [Gossypium hirsutum].
ACCESSION   XP_016722346
VERSION     XP_016722346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..124
                     /product="protein RALF-like 31"
                     /calculated_mol_wt=13982
     Region          55..117
                     /region_name="RALF"
                     /note="Rapid ALkalinization Factor (RALF); pfam05498"
                     /db_xref="CDD:428496"
     CDS             1..124
                     /gene="LOC107934427"
                     /coded_by="XM_016866857.2:185..559"
                     /db_xref="GeneID:107934427"
ORIGIN      
        1 mailklifit ltlpllflhs yvavsilelq nalktseida tvrracskkl edclesedme
       61 setqrrlllm qrryisyetl rrdmvpcqkp gssyydcgaa qanpysrgce iitrcargik
      121 gtkt
//
LOCUS       XP_016722360             485 aa            linear   PLN 06-AUG-2024
DEFINITION  adenosylhomocysteinase 1 [Gossypium hirsutum].
ACCESSION   XP_016722360
VERSION     XP_016722360.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866871.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722360.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..485
                     /product="adenosylhomocysteinase 1"
                     /calculated_mol_wt=52891
     Region          9..485
                     /region_name="PLN02494"
                     /note="adenosylhomocysteinase"
                     /db_xref="CDD:178111"
     CDS             1..485
                     /gene="LOC107934440"
                     /coded_by="XM_016866871.2:108..1565"
                     /db_xref="GeneID:107934440"
ORIGIN      
        1 malsvdktsg greykvkdms qadfgrleid laevempglm acrtefgpsq pfkgakitgs
       61 lhmtiqtavl ietltalgae vrwcscnifs tqdhaaavia rdsasvfawk getlqeywwc
      121 teksldwgag ggpdlivddg gdvtmliheg vkaeeayekt gkvpdptssd naefqivlti
      181 ikdgltanpk kytkmkerlv gvseetttgv krlyqmqang tllfpainvn dsvtkskfdn
      241 lygcrhslpd glmratdvmi agkvavvcgy gdvgkgcasa lkqagarviv teidpicalq
      301 almeglqvlt ledvlstadi fvtttgnkdi imvdhmkkmk nnaivcnigh fdneidmlgl
      361 enypgvkrit ikpqtdrwvf pdtktgiivl aegrlmnlgc atghpsfvms csftnqviaq
      421 lelwkekstg kyekkvyvlp khldekvasl hlgklgaklt kltkaqadyi svpiegpykp
      481 pnyry
//
LOCUS       XP_016722397            1317 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein RAD50 [Gossypium hirsutum].
ACCESSION   XP_016722397
VERSION     XP_016722397.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722397.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1317
                     /product="DNA repair protein RAD50"
                     /calculated_mol_wt=152820
     Region          2..1310
                     /region_name="rad50"
                     /note="TIGR00606"
                     /db_xref="CDD:129694"
     CDS             1..1317
                     /gene="LOC107934476"
                     /coded_by="XM_016866908.2:266..4219"
                     /db_xref="GeneID:107934476"
ORIGIN      
        1 mstvdkmlik girsfdpenk nvitffkplt livgpngagk ttiieclkls ctgelppnar
       61 sghsfihdpk vagetetkgq iklrfktaag kdvvcirsfq ltqkaskmey kaiesvlqtl
      121 nphtgekvcl syrcadmdre ipalmgvska ilenvifvhq deanwplqdp stlkkkfddi
      181 fsatrytral evikklhkdq aqeikayklk lehlqtlkda aykhresiaq dqekteslks
      241 qiqvleknie dldakihnae ltlkdlrkle dqkstktaer stlfkeqqrq yaalaeened
      301 tdeelmewkt kfderimlld nkiqkmesnq qdlneessay rrkletyige igklqrdaet
      361 lvlskkdrdt aieqlfarln lgstpnspfs devalnltrq ievrlmeler dldekkqsnd
      421 kklktawdcy mgasercnia eaqkkaklei kgsilkrlee tksnrdflei qisdvnlssl
      481 ddreknlqve idrksrqlde rnhdkiveqk qlevfaidqk ikvlsherdl aageaterme
      541 lsistrelen kkkqhkkiie eykdrirvvl kgrvppdkdl krevtralsa vqkeydelst
      601 ksseaekevn ilqmkidein snlskhkkem dsrkkflear lnslekqsft idsypqvlet
      661 akekkdvhks kyniadgmrq mfdpfervar ahhicpccer pfsaeeedef vkkqrvkaas
      721 saehmkvlav essnaesyfq qldklrmvye eyiktvkeai plaekkllel neeldqksqa
      781 hddvlgvlaq ikmdkdsiei lvgpvetadr ifqeiqglqa kvegleykfd irgqggartv
      841 ediqselndl qskrdvllke vddlrteqry mekdlqsvkt rwhdirekkv evantlrdfk
      901 kaeeelehls eekrqldlee khlaeslrsl fkekeslled ydclkvklae eyeqqqklrs
      961 syqreaevly evnskikayy dlkkgeklke lreqqsvmes qllnfdarkq eilaelnksk
     1021 dlmrnqdqlr rniednlnyr ktkaevdvls rdieslqeri meiggiskce geirkiseer
     1081 erllselnrc rgtmsvyqsn isknkaelkq aqykdidkry fdqliqlktt emankdldry
     1141 ynaldkalmr fhsmkmeein kiirelwqqt yrgqdidyis ihsdsegagt rsysykvlmq
     1201 tgdaelemrg rcsagqkvla sliirlalae tfclncgila ldepttnldg pnaeslaaal
     1261 hrimedrkgq enfqlivith derfaqligq rqhaekyyrv akddhqhsii eaqeifd
//
LOCUS       XP_016722342              97 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g29660 [Gossypium hirsutum].
ACCESSION   XP_016722342
VERSION     XP_016722342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..97
                     /product="uncharacterized protein At4g29660"
                     /calculated_mol_wt=11373
     CDS             1..97
                     /gene="LOC107934425"
                     /coded_by="XM_016866853.2:490..783"
                     /db_xref="GeneID:107934425"
ORIGIN      
        1 masylwrkya dyvynkwert flwdmlepyr rpksftplvt iyvaafytgv igaaiteqly
       61 kekywedhpg eavplmkpkf yggpwkvlkg dvlppse
//
LOCUS       XP_016722343              97 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g29660 [Gossypium hirsutum].
ACCESSION   XP_016722343
VERSION     XP_016722343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866854.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..97
                     /product="uncharacterized protein At4g29660"
                     /calculated_mol_wt=11373
     CDS             1..97
                     /gene="LOC107934425"
                     /coded_by="XM_016866854.2:457..750"
                     /db_xref="GeneID:107934425"
ORIGIN      
        1 masylwrkya dyvynkwert flwdmlepyr rpksftplvt iyvaafytgv igaaiteqly
       61 kekywedhpg eavplmkpkf yggpwkvlkg dvlppse
//
LOCUS       XP_016722348             143 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich RNA-binding protein 2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016722348
VERSION     XP_016722348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866859.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..143
                     /product="glycine-rich RNA-binding protein 2,
                     mitochondrial"
                     /calculated_mol_wt=15094
     Region          1..119
                     /region_name="PLN03134"
                     /note="glycine-rich RNA-binding protein 4; Provisional"
                     /db_xref="CDD:178680"
     CDS             1..143
                     /gene="LOC107934430"
                     /coded_by="XM_016866859.2:165..596"
                     /db_xref="GeneID:107934430"
ORIGIN      
        1 mafssklgsl frqngqtpmi ssmlnslrcm ststkklfig glsygtddqs lreafsgfgd
       61 vtearviadr dtgrsrgfgf vnfaddesas nalsamdgqe lqgrnirvsy anerpsgprs
      121 fgnnggfggs rgfgggsred ssf
//
LOCUS       XP_016722403             563 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 42 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722403
VERSION     XP_016722403.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866914.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="DEAD-box ATP-dependent RNA helicase 42 isoform
                     X1"
                     /calculated_mol_wt=63205
     CDS             1..563
                     /gene="LOC107934478"
                     /coded_by="XM_016866914.2:1179..2870"
                     /db_xref="GeneID:107934478"
ORIGIN      
        1 msrcfpfppp gyekkartdd vdllnkekqk ekshkkekke krekkekkek drsdgkhkdk
       61 kdkkekhkdk dkkkeksrdk ekekersnns eekkfpgqpd gqngektsde kkflekpegh
      121 sgekfiqkek grdkdrssfs seknfaghis sfnrekigqn shpaqgfrds kfvqelagrv
      181 rdegagaasq ladktmgtnr krdegmvgfv aktahkpaee kekskrsddr rfdvqgikee
      241 traggnamvp nlagavkakv egipkqvenn tekrgegkek vkekegdnkt kdrrkdkdre
      301 kkshgkdkdr dkakeekaka kakgehrnle ldnlkgsnkd gpggninlkt sypskdgnkg
      361 vvaeenlrkr kdlekngffh vddikpnklp ktsssqpltg ngrtlepcqa pipltldskg
      421 agtslkvdnk erkvngiiea qllsvsppkq lsssaqasqi devsirpphp dlkylsqvls
      481 vpkmeqwsdf ddqswlfhsi esqskkpkvg fseideppqv waealqiesa dvcalpvavn
      541 vfeqltaili chgnhhvipl lev
//
LOCUS       XP_016722404             563 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 42 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722404
VERSION     XP_016722404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="DEAD-box ATP-dependent RNA helicase 42 isoform
                     X1"
                     /calculated_mol_wt=63205
     CDS             1..563
                     /gene="LOC107934478"
                     /coded_by="XM_016866915.2:1009..2700"
                     /db_xref="GeneID:107934478"
ORIGIN      
        1 msrcfpfppp gyekkartdd vdllnkekqk ekshkkekke krekkekkek drsdgkhkdk
       61 kdkkekhkdk dkkkeksrdk ekekersnns eekkfpgqpd gqngektsde kkflekpegh
      121 sgekfiqkek grdkdrssfs seknfaghis sfnrekigqn shpaqgfrds kfvqelagrv
      181 rdegagaasq ladktmgtnr krdegmvgfv aktahkpaee kekskrsddr rfdvqgikee
      241 traggnamvp nlagavkakv egipkqvenn tekrgegkek vkekegdnkt kdrrkdkdre
      301 kkshgkdkdr dkakeekaka kakgehrnle ldnlkgsnkd gpggninlkt sypskdgnkg
      361 vvaeenlrkr kdlekngffh vddikpnklp ktsssqpltg ngrtlepcqa pipltldskg
      421 agtslkvdnk erkvngiiea qllsvsppkq lsssaqasqi devsirpphp dlkylsqvls
      481 vpkmeqwsdf ddqswlfhsi esqskkpkvg fseideppqv waealqiesa dvcalpvavn
      541 vfeqltaili chgnhhvipl lev
//
LOCUS       XP_016722405             563 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 42 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722405
VERSION     XP_016722405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="DEAD-box ATP-dependent RNA helicase 42 isoform
                     X1"
                     /calculated_mol_wt=63205
     CDS             1..563
                     /gene="LOC107934478"
                     /coded_by="XM_016866916.2:970..2661"
                     /db_xref="GeneID:107934478"
ORIGIN      
        1 msrcfpfppp gyekkartdd vdllnkekqk ekshkkekke krekkekkek drsdgkhkdk
       61 kdkkekhkdk dkkkeksrdk ekekersnns eekkfpgqpd gqngektsde kkflekpegh
      121 sgekfiqkek grdkdrssfs seknfaghis sfnrekigqn shpaqgfrds kfvqelagrv
      181 rdegagaasq ladktmgtnr krdegmvgfv aktahkpaee kekskrsddr rfdvqgikee
      241 traggnamvp nlagavkakv egipkqvenn tekrgegkek vkekegdnkt kdrrkdkdre
      301 kkshgkdkdr dkakeekaka kakgehrnle ldnlkgsnkd gpggninlkt sypskdgnkg
      361 vvaeenlrkr kdlekngffh vddikpnklp ktsssqpltg ngrtlepcqa pipltldskg
      421 agtslkvdnk erkvngiiea qllsvsppkq lsssaqasqi devsirpphp dlkylsqvls
      481 vpkmeqwsdf ddqswlfhsi esqskkpkvg fseideppqv waealqiesa dvcalpvavn
      541 vfeqltaili chgnhhvipl lev
//
LOCUS       XP_016722406             541 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 42 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016722406
VERSION     XP_016722406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866917.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="DEAD-box ATP-dependent RNA helicase 42 isoform
                     X2"
                     /calculated_mol_wt=60879
     CDS             1..541
                     /gene="LOC107934478"
                     /coded_by="XM_016866917.2:1179..2804"
                     /db_xref="GeneID:107934478"
ORIGIN      
        1 msrcfpfppp gyekkartdd vdllnkekqk ekshkkekke krekkekkek drsdgkhkdk
       61 kdkkekhkdk dkkkeksrdk ekekersnns eekkfpgqpd gqngektsde kkflekpegh
      121 sgekfiqkek grdkdrssfs seknfaghis sfnrekigqn shpaqgfrds kfvqelagrv
      181 rdegagaasq ladktmgtnr krdegmvgfv aktahkpaee kekskrsddr rfdvqgikee
      241 traggnamvp nlagavkakv egipkqvenn tekrgegkek vkekegdnkt kdrrkdkdre
      301 kkshgkdkdr dkakeekaka kakgehrnle ldnlkgsnkd gpggninlkt sypskdgnkg
      361 vvaeenlrkr kdlekngffh vddikpnklp ktsssqpltg ngrtlepcqa pipltldskg
      421 agtslkvdnk erkvngiiea qllsvsppkq lsssaqasqi devsirpphp dlkylsqvls
      481 vpkmeqwsdf ddqswlfhsi esqskkpkvg fseideppqv waealqiesa dvcalpyvip
      541 y
//
LOCUS       XP_016722407             538 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 42 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016722407
VERSION     XP_016722407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..538
                     /product="DEAD-box ATP-dependent RNA helicase 42 isoform
                     X3"
                     /calculated_mol_wt=60386
     CDS             1..538
                     /gene="LOC107934478"
                     /coded_by="XM_016866918.2:1179..2795"
                     /db_xref="GeneID:107934478"
ORIGIN      
        1 msrcfpfppp gyekkartdd vdllnkekqk ekshkkekke krekkekkek drsdgkhkdk
       61 kdkkekhkdk dkkkeksrdk ekekersnns eekkfpgqpd gqngektsde kkflekpegh
      121 sgekfiqkek grdkdrssfs seknfaghis sfnrekigqn shpaqgfrds kfvqelagrv
      181 rdegagaasq ladktmgtnr krdegmvgfv aktahkpaee kekskrsddr rfdvqgikee
      241 traggnamvp nlagavkakv egipkqvenn tekrgegkek vkekegdnkt kdrrkdkdre
      301 kkshgkdkdr dkakeekaka kakgehrnle ldnlkgsnkd gpggninlkt sypskdgnkg
      361 vvaeenlrkr kdlekngffh vddikpnklp ktsssqpltg ngrtlepcqa pipltldskg
      421 agtslkvdnk erkvngiiea qllsvsppkq lsssaqasqi devsirpphp dlkylsqccs
      481 ecfrttdchi dlprqpsrhs tagsvgcisa swyqatnsfq stqtdesnrm tegclkrr
//
LOCUS       XP_016722421             189 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 20, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016722421
VERSION     XP_016722421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..189
                     /product="chaperone protein dnaJ 20, chloroplastic"
                     /calculated_mol_wt=22292
     Region          55..119
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(83..85,96,99..100,103..104)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..189
                     /gene="LOC107934487"
                     /coded_by="XM_016866932.2:248..817"
                     /db_xref="GeneID:107934487"
ORIGIN      
        1 mrcsygltai pgtdarffsp etsflklrrt fqptrikfgs fkikakidea rkemsfyell
       61 gisetgtsle ikqaykqlar kyhpdvsppd rveeyterfi rvqeayetls dprtralydk
      121 dlalgihlaf sarrryqyde dledrsewkn rwqsqlselk rrsmnrdagg nmswgarmrr
      181 qreelskel
//
LOCUS       XP_016722378             992 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine repetitive matrix protein 2 [Gossypium hirsutum].
ACCESSION   XP_016722378
VERSION     XP_016722378.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866889.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722378.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..992
                     /product="serine/arginine repetitive matrix protein 2"
                     /calculated_mol_wt=109727
     Region          76..173
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          340..405
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cd00590"
                     /db_xref="CDD:409669"
     Region          <342..>489
                     /region_name="half-pint"
                     /note="poly-U binding splicing factor, half-pint family;
                     TIGR01645"
                     /db_xref="CDD:130706"
     Region          573..>688
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          740..>853
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     CDS             1..992
                     /gene="LOC107934462"
                     /coded_by="XM_016866889.2:163..3141"
                     /db_xref="GeneID:107934462"
ORIGIN      
        1 madrtsaapk piwmkqaeea klkseaekaa aakaafeatf kdvdkgrnke vvaassdses
       61 edtndlvdkp vgpvdpakcm aagpgiaggt acaastfmvv tkdadgrkvq sggaqikvkv
      121 spgvgvggae qegivkdmgd gtytvtyvvp krgnymvnie cngkpimgsp fpvffsagts
      181 tgavlgvapa stypnlvnqt mpnmpnytgs vsgafpgllg mipgivsgas ggailpgmga
      241 slgevcreyl ngrcaktdck lnhpphnllm talaattsmg tlsqvpmaps aaamaaaqai
      301 vaaqalqaha aqvqsqtqst kdssdspdka akadalkktl qvsnlnpllt veqlkqlfsf
      361 cgtvvectit dskhfayiey skpeeataal alnnmdiggr plnvemaktl ppkpaisslt
      421 ssslplvmqq avamqqmqfq qallmqqtlt aqqaanraas mksatelaaa raaeisrklk
      481 adglvteeke tksksrspsp srarsrsksk splsyrrrsr sktrspisyr rrsrsksrsp
      541 iiyrrksrsk srspisyrrr rrsrsysplp rfqrdrrsrs pvrshhrsry eserrsyrdr
      601 ddndrsgrrd lersrdrhss isrrnrsisp rtrkltpvds dspkhsress pklrksshpg
      661 stsprhhrrn rsspkndder klkyrkrsrs ksvdsdnkkn etpdektkhr srrrsrslss
      721 egrpqrsrss sassdennsk hrrqsrsisv egkvrsgski devrkdelrh gdrrrsrsgs
      781 aegrhytker serirdkksk hrdrrrsrsr sadgkhqdrk rsrsrsfdgk hhrgsrrspr
      841 nsdenrlkhr rrsrsksteg khrsidkvde rskrhdkkhl asgeaqpprg srssprssed
      901 ndsrhrrhsr pksaegddgm lvskeeaydt kvsvnddqel rskylpifds degyspnskl
      961 nadepdrler ssskqwlgsn gsgdqsispr qk
//
LOCUS       XP_016722379             992 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine repetitive matrix protein 2 [Gossypium hirsutum].
ACCESSION   XP_016722379
VERSION     XP_016722379.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866890.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722379.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..992
                     /product="serine/arginine repetitive matrix protein 2"
                     /calculated_mol_wt=109727
     Region          76..173
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          340..405
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cd00590"
                     /db_xref="CDD:409669"
     Region          <342..>489
                     /region_name="half-pint"
                     /note="poly-U binding splicing factor, half-pint family;
                     TIGR01645"
                     /db_xref="CDD:130706"
     Region          573..>688
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     Region          740..>853
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     CDS             1..992
                     /gene="LOC107934462"
                     /coded_by="XM_016866890.2:188..3166"
                     /db_xref="GeneID:107934462"
ORIGIN      
        1 madrtsaapk piwmkqaeea klkseaekaa aakaafeatf kdvdkgrnke vvaassdses
       61 edtndlvdkp vgpvdpakcm aagpgiaggt acaastfmvv tkdadgrkvq sggaqikvkv
      121 spgvgvggae qegivkdmgd gtytvtyvvp krgnymvnie cngkpimgsp fpvffsagts
      181 tgavlgvapa stypnlvnqt mpnmpnytgs vsgafpgllg mipgivsgas ggailpgmga
      241 slgevcreyl ngrcaktdck lnhpphnllm talaattsmg tlsqvpmaps aaamaaaqai
      301 vaaqalqaha aqvqsqtqst kdssdspdka akadalkktl qvsnlnpllt veqlkqlfsf
      361 cgtvvectit dskhfayiey skpeeataal alnnmdiggr plnvemaktl ppkpaisslt
      421 ssslplvmqq avamqqmqfq qallmqqtlt aqqaanraas mksatelaaa raaeisrklk
      481 adglvteeke tksksrspsp srarsrsksk splsyrrrsr sktrspisyr rrsrsksrsp
      541 iiyrrksrsk srspisyrrr rrsrsysplp rfqrdrrsrs pvrshhrsry eserrsyrdr
      601 ddndrsgrrd lersrdrhss isrrnrsisp rtrkltpvds dspkhsress pklrksshpg
      661 stsprhhrrn rsspkndder klkyrkrsrs ksvdsdnkkn etpdektkhr srrrsrslss
      721 egrpqrsrss sassdennsk hrrqsrsisv egkvrsgski devrkdelrh gdrrrsrsgs
      781 aegrhytker serirdkksk hrdrrrsrsr sadgkhqdrk rsrsrsfdgk hhrgsrrspr
      841 nsdenrlkhr rrsrsksteg khrsidkvde rskrhdkkhl asgeaqpprg srssprssed
      901 ndsrhrrhsr pksaegddgm lvskeeaydt kvsvnddqel rskylpifds degyspnskl
      961 nadepdrler ssskqwlgsn gsgdqsispr qk
//
LOCUS       XP_016722355             322 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016722355
VERSION     XP_016722355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="probable magnesium transporter NIPA1 isoform X1"
                     /calculated_mol_wt=35202
     Region          7..299
                     /region_name="Mg_trans_NIPA"
                     /note="Magnesium transporter NIPA; pfam05653"
                     /db_xref="CDD:398984"
     CDS             1..322
                     /gene="LOC107934435"
                     /coded_by="XM_016866866.2:300..1268"
                     /db_xref="GeneID:107934435"
ORIGIN      
        1 mngmsmdnfr glilavsssv figssfiikk qglkkagasg pragqgghsy lyepwwwagm
       61 itmiigeian faayayapai lvtplgalsi ifsavlahfi lkerlhifgm lgcalcvvgs
      121 ttivlhapke rhiesvkqvw hlatepgflv yfwvalavva viifhyvpry gqthlvvyig
      181 icslmgsltv mgvkavgial klsfggvnqf kyfetwifti ivifccllqi nylnkaldtf
      241 ntavvcpvyy vmfttftiia siimfkdwns qggteittel cgfitilsgt fllhktkdmg
      301 ksssgrlpvy tspesntvae sr
//
LOCUS       XP_016722356             291 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016722356
VERSION     XP_016722356.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866867.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..291
                     /product="probable magnesium transporter NIPA2 isoform X2"
                     /calculated_mol_wt=31699
     Region          7..268
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..291
                     /gene="LOC107934435"
                     /coded_by="XM_016866867.2:279..1154"
                     /db_xref="GeneID:107934435"
ORIGIN      
        1 mngmsmdnfr glilavsssv figssfiikk qglkkagasg pragqgghsy lyepwwwagm
       61 itmiigeian faayayapai lvtplgalsi ifsavlahfi lkerlhifgm lgcalcvvgs
      121 ttivlhapke rhiesvkqvw hlatepgflv yfwvalavva viifhyvpry gqthlvvyig
      181 icslmgsltv mgvkavgial klsfggvnqf kyfetwifti ivifccllqi nylnkdwnsq
      241 ggteittelc gfitilsgtf llhktkdmgk sssgrlpvyt spesntvaes r
//
LOCUS       XP_016722362            1141 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016722362
VERSION     XP_016722362.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866873.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722362.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1141
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=127929
     Region          36..80
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          65..>729
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          108..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..262
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          335..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..>1064
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          432..454
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          457..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          575..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..697
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          698..720
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          721..744
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          745..768
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          769..791
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          792..815
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          816..839
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          864..889
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          890..955
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          956..979
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          980..1003
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1004..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1141
                     /gene="LOC107934441"
                     /coded_by="XM_016866873.2:25..3450"
                     /db_xref="GeneID:107934441"
ORIGIN      
        1 mntlhsliss lflfscflpl llsfsppqth lpmqclddqr spllqlqhhl yyapnftfss
       61 nfdlwdvntd ccswegvtcd ayghvvgidl syknlsgsfh pifnlyrlqr lnlagnnfnt
      121 tlfsygfdkl qnlthlnlss scfhgqipve isflkrlvsl dlsnqdscyc rfykilypgf
      181 yycfllpyel qqplklenpn fktliknlrf ltelyldgvn istqsakwce ttslvlsnlr
      241 vlslsncglk gplcsslsrl sflsklildg npisylppnf leissrlvsl slgncnlsgh
      301 fpteillspk iqsidisand qlmgqlpefp annallslsl ydtnfsgklp hsignlkflt
      361 nlelsgckff gpipwpianl shlvnlnlgy ndfsglipsf hrlgvpnlen lnlegnklfg
      421 sihsslftlp slkilslgdn qlvgkmdefp nassslievl signnyltgp ipksilqlpr
      481 lewlyiesns fssmkldmfv qlknlkgldl snvsllidsd nrsltfpqle slglrscnlt
      541 efpefiktqd klvslglsnn hihgvvpnwl wksslsmldl sfnvidfpkq lplsdanfsf
      601 pllrrlrlrs cnisafpefl ksqenleyld assnklsgpi pnwlcnmsql shfdasynnl
      661 sgsipncldn msqlgsfdvs ynnlsgqipn clgkmnalfs lnlqgnnfsg mlpkfskatq
      721 lnflkvsenr legklprsla ectqlvvldv gsnmindtfp fwleklpylm vlilrenrfy
      781 gqikhrfvfp tldvldiasn qfsgelsidf lqptrlrslk iggnklegkl srslanctal
      841 evldlgnnmv hdtfpfwlek lpslkvlvlr anrfygtisk idtergfpkl rildigsnhf
      901 sgdlsieflq slkamakmtn dekakldyig enysqdsvti vnkgiemsyq kvltiltcld
      961 lsnnsfhgri peeiqmlrsl rvmnlsnngf sgeiplalen lkdlesldls qnelsgkipa
     1021 qltsltflaa lnlsynqleg sipqsnqfit ftndsyrgnp klcglplsrk cnevglpmlp
     1081 ppgedvdsrl yavstwkial igyasglvvg lcigytvlne lgnkwvdkfk kcgkrnrrrc
     1141 r
//
LOCUS       XP_040943964             135 aa            linear   PLN 06-AUG-2024
DEFINITION  probable magnesium transporter NIPA2 [Gossypium hirsutum].
ACCESSION   XP_040943964
VERSION     XP_040943964.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088030.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="probable magnesium transporter NIPA2"
                     /calculated_mol_wt=14697
     Region          6..>134
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..135
                     /gene="LOC107934451"
                     /coded_by="XM_041088030.1:45..452"
                     /db_xref="GeneID:107934451"
ORIGIN      
        1 mcfnftviig eianfaayay apailvtplg alsiifsavl ahfilkerlh ifgmlgcalc
       61 vvgsttivlh apkerhiesv kqvwhlatep gflvyfwvvl avvaviifqy vprygqthlv
      121 vyigicslmg sltvc
//
LOCUS       XP_040943965            1155 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_040943965
VERSION     XP_040943965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088031.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1155
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=130735
     Region          36..80
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          65..>750
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          108..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          157..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          335..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          432..454
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          453..>1078
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          457..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          603..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..687
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          688..711
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          712..734
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          735..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          759..782
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..805
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          806..829
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          830..853
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          878..903
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          904..969
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          970..993
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          994..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1018..1041
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1155
                     /gene="LOC107934450"
                     /coded_by="XM_041088031.1:28..3495"
                     /db_xref="GeneID:107934450"
ORIGIN      
        1 mntlhsliss lflfscflpl llsfsppqth lpmqclddqr spllqlqhhl yyaphftfss
       61 kfelwhpntd ccswegvtcd ayghvvgidl syknlsgsfh lifnlhrlqr lnlagnnfnt
      121 tlfsygfdkl qnlthlnlss scfhgqipve isflkrlvsl dlsnqdscyl ryykvlypgf
      181 ynrfslpyel qqplklenpn fktliknlrf ltelyldsvd istqsakwce ttslvlsnlr
      241 vlslsncdle gplcsslsrl sflsklildg npisylppnf leissrlvsl slrdcnlngh
      301 fptgilllpk iqsidisgnd qlmgqlpefp annalqslsl sytnfrgelp qsignlkflt
      361 dlhlsgcnff gpipssianl shlvnlglgy nyfsglipsf hrfgvpnlen lnletnklfg
      421 sihsslftlp slktfylgen qlvgkidefp nassslievl signnyltgp ipksilqlpr
      481 lewlyiesns fssmkldmfv hlknlryltl lntslliesd nrsltfpqle slslrscnlt
      541 efpefikrqd klvyldlsnn hihgvvpnwl wksslsslhl sfnvidfpkq lplndanfsf
      601 smlrvlyles cnisafpefl kslenlvvld lsnnkisgai pnwvwkkslr ylylannhis
      661 sldqllpnqs stssqtsltr aicnlsklrn fnashnnlsg tipnclgkmn dlylldlqgn
      721 nfsgmlpkfs kvtqlyilkv senrlegklp rslaectqle vldvgnnkmn dtfpfwlekl
      781 pyltvlilre nrfygqikhr fvfptldvld iasnqfsgel sidflqatrl rslkiggnkl
      841 egklsrslan ckalevldlg nnmvhdtfpf wleklpslkv lilrgnrfyg titkfnterg
      901 fpklrildia snnfsgdlsi eflqslkamm qltnddkakl dyigenyyqd svtifnkgik
      961 lfyekilttl tcldlsnnsf hgripeeiqm lrslkvlnls ynsfsgeipv avqnlkdles
     1021 ldlsqnelsg kippqlttlt flealnfsyn plegsipqgn qfstfsndsy rgnpklcgqp
     1081 lskkcnedgl pvppppgeee qswlyamstw kivligygsg lvagicigyt vlnelgnkwv
     1141 dkfkkhgkrn rrrsr
//
LOCUS       XP_016722359            1189 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016722359
VERSION     XP_016722359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1189
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=133742
     Region          35..79
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          64..>761
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          107..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..296
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          345..368
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          369..393
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          394..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          418..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          443..466
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          467..514
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          515..537
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          537..>1112
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          538..559
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          561..611
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          612..634
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          635..673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..697
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          698..721
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          722..745
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          746..768
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          769..790
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          793..863
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          817..839
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          864..885
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          912..937
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          938..956
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1004..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1028..1051
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1052..1075
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1189
                     /gene="LOC107934439"
                     /coded_by="XM_016866870.2:8..3577"
                     /db_xref="GeneID:107934439"
ORIGIN      
        1 mdtlhflisl flfscflplv lsfsppqthl pkqclddqrs lllklqhhly yapnftfssk
       61 felwdpntvc cswegvtcda yghvvgidls yknlsgsfhs ifnlhhlqhl nlagnnfntt
      121 lfsygfdklq nlthlnlsss cfhgqipmni sfltrlvsld lsyqgscyqr ngydyyllsl
      181 klekpnfktf iknlkfltel yldgvdistq stkwcettsl vlpdlhvlsl sscglegplc
      241 sslsrlsfls klvldgnpis ylppnflvns crlvslslrd ctlsghfptg illlpkiqsi
      301 dislnfqlmg elpefpsnsa lqrlsliytn fsgklpesig nlkfltnlel sycnifgpip
      361 ssianlshlv nldlrynnfs glipsfhrfg vpnlvnlyld gnklfgsihs slftlpslkt
      421 fylgdnqlvg kidefpnass slievlyign nyltgpipks mlqlprlerl hiegnsfsfm
      481 kldmsvqlnn lrdltlsnvn lvteshnesl tfplleslsl rscnltefpe fikaqdklve
      541 ldlsnnhiyg vvpnwlwkst lswvdlsfnm idfpnqlpss danfsvpklr elylefcnis
      601 lfpeilrspe nlteldlsnn kisgaipnwa wkkslhylnl annhlssldq llpnqsstss
      661 qsslprpicn lsqllhftas hnnlsgpiln clcnmsqlid fdvsnnnlsg pipdclykms
      721 rlsgfnasyn nlsgpipncl gnmsalsrld lhgnnfngil pkfskatqlw llnvgenrle
      781 gelprslaec tqlevldvgn nmmhdkfpfw lekltelkvl ilrenrfygq ikhkfvfptl
      841 dvldiasnqf sgelsidfvq atqlrslkig gnklegklpr slanctalev ldlgnnmvhd
      901 tfpfwleklp slkvlilran rfygtitkfd tergfpklri ldtasnnfsg dlsiaflqsl
      961 kammqitndd kaklvyigeq yyqdsvtivn kgiemlyqkv ltiltcldls nnsfhgripe
     1021 eiqilrslkv lnlsynnfdd eipvavqnlk dlesldlsqn elsgkippql tdltflaaln
     1081 lsynqlegsi pqsnqfvtfs ndsyrgnpkl cgqplskkcn evglpmpplp gededswlya
     1141 mstwkivlig yasglvvglc igytvlnelg nkwvnkfkkg gkrnrtrcr
//
LOCUS       XP_040943966             113 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22-like [Gossypium hirsutum].
ACCESSION   XP_040943966
VERSION     XP_040943966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088032.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..113
                     /product="cytochrome P450 CYP749A22-like"
                     /calculated_mol_wt=12497
     Region          <1..>113
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     CDS             1..113
                     /gene="LOC121214419"
                     /coded_by="XM_041088032.1:285..626"
                     /db_xref="GeneID:121214419"
ORIGIN      
        1 meiikktenk vvsgeadsfg ddylgllvna yhdlndknkl sledsvgeck tiyfagqstl
       61 gsllswivlh laihgdwqdk arrevidifg nqnpllegit klktmfmiin gti
//
LOCUS       XP_016722370             529 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inorganic phosphate transporter 1-5 [Gossypium hirsutum].
ACCESSION   XP_016722370
VERSION     XP_016722370.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722370.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..529
                     /product="probable inorganic phosphate transporter 1-5"
                     /calculated_mol_wt=58031
     Region          10..511
                     /region_name="2A0109"
                     /note="phosphate:H+ symporter; TIGR00887"
                     /db_xref="CDD:129965"
     CDS             1..529
                     /gene="LOC107934449"
                     /coded_by="XM_016866881.2:4..1593"
                     /db_xref="GeneID:107934449"
ORIGIN      
        1 menqlgvlna ldaaktqwyh ftaiviagmg fftdaydlfs islitkllgr iyyfdahsak
       61 pgtlppriaa avngvafcgt lagqlffgwl gdklgrkrvy gltlmlmvic siasglsfgk
      121 sphgvmatlc ffrfwlgfgi ggdyplsati mseyankktr gafiaavfam qgfgiltggi
      181 valivsaafd haykahpynv drehstapqa dyiwriilmf galpalltyy wrmkmpetar
      241 ytalvarnak qaaadmskvl qvdlnaeqek vdkigreqfg lfskefakrh glnllgttst
      301 wflldiafys snlfqkdifs aigwlpkaet msatkevyrv akaqtlialc gtvpgywftv
      361 afiehlgrft iqlmgfffms vfmfalaipy qhwkthnsgf limysltfff anfgpnattf
      421 ivpaeifpar lrstchgisa aagkagaivg sfgflyaaqs thldkvdkgy ptgigvknal
      481 mvlgavnclg mlftllvpet mgrsleditg eneednghqq sfsvekvpv
//
LOCUS       XP_016722374             529 aa            linear   PLN 06-AUG-2024
DEFINITION  low affinity inorganic phosphate transporter 1 [Gossypium
            hirsutum].
ACCESSION   XP_016722374
VERSION     XP_016722374.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866885.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722374.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..529
                     /product="low affinity inorganic phosphate transporter 1"
                     /calculated_mol_wt=58078
     Region          10..511
                     /region_name="2A0109"
                     /note="phosphate:H+ symporter; TIGR00887"
                     /db_xref="CDD:129965"
     CDS             1..529
                     /gene="LOC107934454"
                     /coded_by="XM_016866885.2:1..1590"
                     /db_xref="GeneID:107934454"
ORIGIN      
        1 manqlgvlna ldaaktqwyh ftaiviagmg fftdaydlfs islitkllgr iyyfdalsek
       61 pgtlplriaa avngvafcgt lagqlffgwl gdklgrkrvy gltlmlmvic siasglsfgk
      121 spdgvmatlc ffrfwlgfgi ggdyplsati mseyankktr gafiaavfam qgfgiltggi
      181 ialivsaafd haykalpynv drehstapqa dyiwriilmf gaipalltyy wrmkmpetar
      241 ytalvarnak qaaadmskvl qvelnaeqek vdkigreqfg lfskefakrh glhllgttst
      301 wflldiafys snlfqkdifs aigwlpkaet msatkevyqi akaqtlialc gtvpgywftv
      361 afiehlgrfa iqlmgfffms vfmfalaipy pywkthntgf limysltfff anfgpnattf
      421 ivpaeifpar lrstchgisa aagkagaivg slgflyaaqs tnhdkvdkgy htgigvknal
      481 ivlgavnclg mlftllvpet mgrsleditg eneedngyeq rfsvekvpv
//
LOCUS       XP_016722363             531 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inorganic phosphate transporter 1-5 [Gossypium hirsutum].
ACCESSION   XP_016722363
VERSION     XP_016722363.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866874.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722363.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..531
                     /product="probable inorganic phosphate transporter 1-5"
                     /calculated_mol_wt=58024
     Region          10..514
                     /region_name="2A0109"
                     /note="phosphate:H+ symporter; TIGR00887"
                     /db_xref="CDD:129965"
     CDS             1..531
                     /gene="LOC107934443"
                     /coded_by="XM_016866874.2:96..1691"
                     /db_xref="GeneID:107934443"
ORIGIN      
        1 menqlgvlna ldaaktqwyh ftaiviagmg fftdaydlfs islitkllgr iyyfdahsak
       61 pgtlppriaa avngvafcgt lagqlffgwl gdklgrkrvy gltlmlmvic siasglsfgk
      121 sphgvmatlc ffrfwlgfgi ggdyplsati mseyankktr gafiaavfam qgfgiltggi
      181 valivsaafd haykalpynf drehstapqa dyiwriilmf gaipalltyy wrmkmpetar
      241 ytalvarnak qaaadmskvl qvdlnaeqek vdkigiepsn sfglfskefa krhglhllgt
      301 tstwflldia fyssnlfqkd ifsaigwlpk aetmsathev yrvakaqtli alcgtvpgyw
      361 ftvafidhig rfviqlmgff fmsvfmfala ipyqhwkthn agflimyslt fffanfgpna
      421 ttfvvpaeif parlrstchg isaaagkaga ivgsfgflya aqsthpdkvd kgyhtgigvk
      481 nallvlgavn clgmlftllv pepkgrslee itgeneedkg qqqasvgnvp v
//
LOCUS       XP_016722364             531 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inorganic phosphate transporter 1-5 [Gossypium hirsutum].
ACCESSION   XP_016722364
VERSION     XP_016722364.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866875.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722364.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..531
                     /product="probable inorganic phosphate transporter 1-5"
                     /calculated_mol_wt=58024
     Region          10..514
                     /region_name="2A0109"
                     /note="phosphate:H+ symporter; TIGR00887"
                     /db_xref="CDD:129965"
     CDS             1..531
                     /gene="LOC107934443"
                     /coded_by="XM_016866875.2:87..1682"
                     /db_xref="GeneID:107934443"
ORIGIN      
        1 menqlgvlna ldaaktqwyh ftaiviagmg fftdaydlfs islitkllgr iyyfdahsak
       61 pgtlppriaa avngvafcgt lagqlffgwl gdklgrkrvy gltlmlmvic siasglsfgk
      121 sphgvmatlc ffrfwlgfgi ggdyplsati mseyankktr gafiaavfam qgfgiltggi
      181 valivsaafd haykalpynf drehstapqa dyiwriilmf gaipalltyy wrmkmpetar
      241 ytalvarnak qaaadmskvl qvdlnaeqek vdkigiepsn sfglfskefa krhglhllgt
      301 tstwflldia fyssnlfqkd ifsaigwlpk aetmsathev yrvakaqtli alcgtvpgyw
      361 ftvafidhig rfviqlmgff fmsvfmfala ipyqhwkthn agflimyslt fffanfgpna
      421 ttfvvpaeif parlrstchg isaaagkaga ivgsfgflya aqsthpdkvd kgyhtgigvk
      481 nallvlgavn clgmlftllv pepkgrslee itgeneedkg qqqasvgnvp v
//
LOCUS       XP_016722353             115 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722353
VERSION     XP_016722353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866864.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..115
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12648
     CDS             1..115
                     /gene="LOC107934433"
                     /coded_by="XM_016866864.2:207..554"
                     /db_xref="GeneID:107934433"
ORIGIN      
        1 msdayekvkg grltfkggsl atrksidksk kkhkkkkiae ddtqptldas tvsvegsesg
       61 gadiytidaa kkmkyeelfp vearkfgydp knpkatsveq alddrvkkka dryck
//
LOCUS       XP_016722415             766 aa            linear   PLN 06-AUG-2024
DEFINITION  eEF1A lysine and N-terminal methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016722415
VERSION     XP_016722415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..766
                     /product="eEF1A lysine and N-terminal methyltransferase"
                     /calculated_mol_wt=84664
     Region          82..175
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     Region          545..722
                     /region_name="SpeE"
                     /note="Spermidine synthase (polyamine
                     aminopropyltransferase) [Amino acid transport and
                     metabolism]; COG0421"
                     /db_xref="CDD:440190"
     CDS             1..766
                     /gene="LOC107934484"
                     /coded_by="XM_016866926.2:85..2385"
                     /db_xref="GeneID:107934484"
ORIGIN      
        1 mgkkknqkqq psaskddlln tlgdftsken wdsfftirgs ddsfewyaew pqlrdsllpl
       61 iqqhpspssp spssslqilv pgcgnsrlse hlydagfgdi tnidfskvvi sgmlrrnvrd
      121 rpnmrwrvmd mtqmqfpddt fnvvldkggl dalmepelgp qlgtkylsev krvlksrgkf
      181 icltlaeshv lgllfpkfrf gwnvclyaip qkpstkpdlq tfmvvaekes snelhqiiss
      241 fdhsslacnp nqtsglleal esenqirgey lngsdvlysl edlqlgakgd lkklspgrrv
      301 qltlgdqgvs hfcykavlld akqqsgafsf hcgvfivpkt rshewlfsse egqwqvvess
      361 kaarlimvll eashanagme diqkdlsplv kplapadndk gnqipfmtas dgikqrsvvy
      421 qgsssltgpv viedvvyent dddvshslpf rrlvferteg lvqsealltr dglfdksvyg
      481 tekkkassss kskrrgalkr nnessgkmkv yhgylassyh taiisgfsli ssylesvass
      541 gnrvkavvig lgagllpmfl hgcmqsmqie gveldpvmln lardyfgfte dkrmkvhiad
      601 giqfvrdyrn lfsagnevll ssngscklsd aesrstaidi iivdvdssds ssglrcpaad
      661 fvedsflqnv kdtlseqglf vinlvsrspa ikdavvsrmk evfshlfciq legevnlvlf
      721 glcseshiee dcipdaalkl dkllksehpe isqsitdaak klkrlk
//
LOCUS       XP_016722413             254 aa            linear   PLN 06-AUG-2024
DEFINITION  alkaline ceramidase [Gossypium hirsutum].
ACCESSION   XP_016722413
VERSION     XP_016722413.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722413.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..254
                     /product="alkaline ceramidase"
                     /calculated_mol_wt=29849
     Region          10..247
                     /region_name="Ceramidase"
                     /note="pfam05875"
                     /db_xref="CDD:461766"
     CDS             1..254
                     /gene="LOC107934483"
                     /coded_by="XM_016866924.2:352..1116"
                     /db_xref="GeneID:107934483"
ORIGIN      
        1 medglssfwg pvtstdwcek nyvyssyiae ffntisnvpg illaliglvn alrqrfekrf
       61 svlhisnmil aigsmiyhst lqhvqqqgde tpmvwemlly fyilyspdwh yrstmptflf
      121 fygalyavvh alfrfgfgfk vhyiilcllc iprmykyyiy tkdvsakrla klyvatlllg
      181 sicwlsdrvf ckeishwhfn pqghglwhil mgfnsyfant flmfcraqqr ewnpkvvyfl
      241 gvfpyvkiqk pksq
//
LOCUS       XP_016722414             254 aa            linear   PLN 06-AUG-2024
DEFINITION  alkaline ceramidase [Gossypium hirsutum].
ACCESSION   XP_016722414
VERSION     XP_016722414.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722414.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..254
                     /product="alkaline ceramidase"
                     /calculated_mol_wt=29849
     Region          10..247
                     /region_name="Ceramidase"
                     /note="pfam05875"
                     /db_xref="CDD:461766"
     CDS             1..254
                     /gene="LOC107934483"
                     /coded_by="XM_016866925.2:215..979"
                     /db_xref="GeneID:107934483"
ORIGIN      
        1 medglssfwg pvtstdwcek nyvyssyiae ffntisnvpg illaliglvn alrqrfekrf
       61 svlhisnmil aigsmiyhst lqhvqqqgde tpmvwemlly fyilyspdwh yrstmptflf
      121 fygalyavvh alfrfgfgfk vhyiilcllc iprmykyyiy tkdvsakrla klyvatlllg
      181 sicwlsdrvf ckeishwhfn pqghglwhil mgfnsyfant flmfcraqqr ewnpkvvyfl
      241 gvfpyvkiqk pksq
//
LOCUS       XP_016722382             922 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722382
VERSION     XP_016722382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866893.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..922
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=104096
     Region          213..257
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          754..901
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..922
                     /gene="LOC107934464"
                     /coded_by="XM_016866893.2:1019..3787"
                     /db_xref="GeneID:107934464"
ORIGIN      
        1 makrsnrrpv ryerdqmgcm wglitmfdfr hgrstqrlls drrrgnrnvv gmgnsgnkin
       61 mstssgedka mamdtckpsv kklleeemsr ehatkeevnn teldakqfds gegdnerknq
      121 krrnktrkks sggsldvdaa ktlvseiscy hkseqqttsn ldienlveel cqemgqkrid
      181 cvnrdqpveg hmqpnmkssr feemseaikf lvsqklinrn qlteggelqa skeamhalqi
      241 lslneelflk llrdpnsslv knsknspnar deeskpfsrs nfseqepvgl rqlnetvnrk
      301 qrnffrrksk slerdlsdeq kvseastkiv vlkpgptcsq taetgssigs speskniirr
      361 retnekvgsh fflseikrkf rhamgrehhr ipakeipkrl sgerqsssdn gglkeyigmn
      421 sptkdhffie riakpsssvk kgektsklkg pessteyett hfsrhsniyi eakkhlseml
      481 tngddimdls grqvpktlgr ilslpdynss pigsparnpe pssiaaqsrf aspdklqklq
      541 nnvsklsqsa eepesrpgvs dnkngdevrg dnailnklda cvnddkedqs hssstkdemg
      601 cevyageviv veeteitvee etelldasse tndysitrdd knvdmsevyd ekqypeclkq
      661 dlteedqqlf splaspsnss ltkkveglee rpspvsvlep ifaedvispa sircisgets
      721 mqplrirfee hggslatncs nrfktcmddk esiyeyvkav veassfewde fyirslssdm
      781 lldpllldev eylpnqlchd knllfdcine vlvevcgyyl gspgvsfvkt nirpipnlkk
      841 tieevwqgvy whmlpmplpr sldqivrkdm akagtwmdlr ldtdciggei seaifedfve
      901 dtitsylnvs leceyhaegl qe
//
LOCUS       XP_040943968             922 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943968
VERSION     XP_040943968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088034.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..922
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=104096
     Region          213..257
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          754..901
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..922
                     /gene="LOC107934464"
                     /coded_by="XM_041088034.1:177..2945"
                     /db_xref="GeneID:107934464"
ORIGIN      
        1 makrsnrrpv ryerdqmgcm wglitmfdfr hgrstqrlls drrrgnrnvv gmgnsgnkin
       61 mstssgedka mamdtckpsv kklleeemsr ehatkeevnn teldakqfds gegdnerknq
      121 krrnktrkks sggsldvdaa ktlvseiscy hkseqqttsn ldienlveel cqemgqkrid
      181 cvnrdqpveg hmqpnmkssr feemseaikf lvsqklinrn qlteggelqa skeamhalqi
      241 lslneelflk llrdpnsslv knsknspnar deeskpfsrs nfseqepvgl rqlnetvnrk
      301 qrnffrrksk slerdlsdeq kvseastkiv vlkpgptcsq taetgssigs speskniirr
      361 retnekvgsh fflseikrkf rhamgrehhr ipakeipkrl sgerqsssdn gglkeyigmn
      421 sptkdhffie riakpsssvk kgektsklkg pessteyett hfsrhsniyi eakkhlseml
      481 tngddimdls grqvpktlgr ilslpdynss pigsparnpe pssiaaqsrf aspdklqklq
      541 nnvsklsqsa eepesrpgvs dnkngdevrg dnailnklda cvnddkedqs hssstkdemg
      601 cevyageviv veeteitvee etelldasse tndysitrdd knvdmsevyd ekqypeclkq
      661 dlteedqqlf splaspsnss ltkkveglee rpspvsvlep ifaedvispa sircisgets
      721 mqplrirfee hggslatncs nrfktcmddk esiyeyvkav veassfewde fyirslssdm
      781 lldpllldev eylpnqlchd knllfdcine vlvevcgyyl gspgvsfvkt nirpipnlkk
      841 tieevwqgvy whmlpmplpr sldqivrkdm akagtwmdlr ldtdciggei seaifedfve
      901 dtitsylnvs leceyhaegl qe
//
LOCUS       XP_040943969             922 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943969
VERSION     XP_040943969.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088035.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..922
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=104096
     Region          213..257
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          754..901
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..922
                     /gene="LOC107934464"
                     /coded_by="XM_041088035.1:162..2930"
                     /db_xref="GeneID:107934464"
ORIGIN      
        1 makrsnrrpv ryerdqmgcm wglitmfdfr hgrstqrlls drrrgnrnvv gmgnsgnkin
       61 mstssgedka mamdtckpsv kklleeemsr ehatkeevnn teldakqfds gegdnerknq
      121 krrnktrkks sggsldvdaa ktlvseiscy hkseqqttsn ldienlveel cqemgqkrid
      181 cvnrdqpveg hmqpnmkssr feemseaikf lvsqklinrn qlteggelqa skeamhalqi
      241 lslneelflk llrdpnsslv knsknspnar deeskpfsrs nfseqepvgl rqlnetvnrk
      301 qrnffrrksk slerdlsdeq kvseastkiv vlkpgptcsq taetgssigs speskniirr
      361 retnekvgsh fflseikrkf rhamgrehhr ipakeipkrl sgerqsssdn gglkeyigmn
      421 sptkdhffie riakpsssvk kgektsklkg pessteyett hfsrhsniyi eakkhlseml
      481 tngddimdls grqvpktlgr ilslpdynss pigsparnpe pssiaaqsrf aspdklqklq
      541 nnvsklsqsa eepesrpgvs dnkngdevrg dnailnklda cvnddkedqs hssstkdemg
      601 cevyageviv veeteitvee etelldasse tndysitrdd knvdmsevyd ekqypeclkq
      661 dlteedqqlf splaspsnss ltkkveglee rpspvsvlep ifaedvispa sircisgets
      721 mqplrirfee hggslatncs nrfktcmddk esiyeyvkav veassfewde fyirslssdm
      781 lldpllldev eylpnqlchd knllfdcine vlvevcgyyl gspgvsfvkt nirpipnlkk
      841 tieevwqgvy whmlpmplpr sldqivrkdm akagtwmdlr ldtdciggei seaifedfve
      901 dtitsylnvs leceyhaegl qe
//
LOCUS       XP_016722383             919 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722383
VERSION     XP_016722383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866894.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..919
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=103763
     Region          213..257
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          751..898
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..919
                     /gene="LOC107934464"
                     /coded_by="XM_016866894.2:1048..3807"
                     /db_xref="GeneID:107934464"
ORIGIN      
        1 makrsnrrpv ryerdqmgcm wglitmfdfr hgrstqrlls drrrgnrnvv gmgnsgnkin
       61 mstssgedka mamdtckpsv kklleeemsr ehatkeevnn teldakqfds gegdnerknq
      121 krrnktrkks sggsldvdaa ktlvseiscy hkseqqttsn ldienlveel cqemgqkrid
      181 cvnrdqpveg hmqpnmkssr feemseaikf lvsqklinrn qlteggelqa skeamhalqi
      241 lslneelflk llrdpnsslv knsknspnar deeskpfsrs nfseqepvgl rqlnetvnrk
      301 qrnffrrksk slerdlsdeq kvseastkiv vlkpgptcsq taetgssigs speskniirr
      361 retnekvgsh fflseikrkf rhamgrehhr ipakeipkrl sgerqsssdn gglkeyigmn
      421 sptkdhffie riakpsssvk kgektsklkg pessteyett hfsrhsniyi eakkhlseml
      481 tngddimdls grqvpktlgr ilslpdynss pigsparnpe pssiaaqsrf aspdklqklq
      541 nnvsklsqsa eepesrpgvs dnkngdevrg dnailnklda cvnddkedqs hssstkdemg
      601 cegevivvee teitveeete lldassetnd ysitrddknv dmsevydekq ypeclkqdlt
      661 eedqqlfspl aspsnssltk kvegleerps pvsvlepifa edvispasir cisgetsmqp
      721 lrirfeehgg slatncsnrf ktcmddkesi yeyvkavvea ssfewdefyi rslssdmlld
      781 pllldeveyl pnqlchdknl lfdcinevlv evcgyylgsp gvsfvktnir pipnlkktie
      841 evwqgvywhm lpmplprsld qivrkdmaka gtwmdlrldt dciggeisea ifedfvedti
      901 tsylnvslec eyhaeglqe
//
LOCUS       XP_016722412             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722412
VERSION     XP_016722412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14604
     Region          12..119
                     /region_name="DUF3245"
                     /note="Protein of unknown function (DUF3245); pfam11595"
                     /db_xref="CDD:371618"
     CDS             1..135
                     /gene="LOC107934482"
                     /coded_by="XM_016866923.2:345..752"
                     /db_xref="GeneID:107934482"
ORIGIN      
        1 matgtpkksg ppkivtlnna lklaeqwink mngsaeyevv eaepearper lglgakvprq
       61 skvglsndpv erklsaklgv gkrkvlknqd stipsskdrv deddgdedld srssafskkr
      121 avpltsqlqv kkkpk
//
LOCUS       XP_016722375             303 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1b [Gossypium hirsutum].
ACCESSION   XP_016722375
VERSION     XP_016722375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866886.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="thaumatin-like protein 1b"
                     /calculated_mol_wt=32115
     Region          27..249
                     /region_name="TLP-PA"
                     /note="allergenic/antifungal thaumatin-like proteins:
                     plant and animal homologs; cd09218"
                     /db_xref="CDD:185757"
     Site            order(76,117,130,135,232)
                     /site_type="other"
                     /note="electronegative/electropositive cleft residues"
                     /db_xref="CDD:185757"
     Site            order(200..201,203..212,214..231)
                     /site_type="other"
                     /note="predicted IgE-binding epitope region"
                     /db_xref="CDD:185757"
     CDS             1..303
                     /gene="LOC107934455"
                     /coded_by="XM_016866886.2:152..1063"
                     /db_xref="GeneID:107934455"
ORIGIN      
        1 msthcpilps ffliflaffg ytsyaytftv tnncpytiwp gtlsgagtpq lsttgfqlds
       61 gqsvripsvp agwsgriwgr tgcsfdatgv glcqtgdcgg klacngngat ppaslfeitf
      121 gvgnlqdfyd vsfvdgynlp lvaaprgvyg acnatgcayd lnmgcpkelq vvggdgegsg
      181 rvvgcksace afrqdqyccs gefanpttcr psfyssvfkk acpkaysyay ddasstftck
      241 aldyviifcp nsqsqranrt nggftppsnd dgtegkvqiv snssnlpfpf pilillllvn
      301 lff
//
LOCUS       XP_040943970             334 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040943970
VERSION     XP_040943970.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088036.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..334
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=38651
     Region          <136..>165
                     /region_name="MRP-L20"
                     /note="Mitochondrial ribosomal protein subunit L20;
                     pfam12824"
                     /db_xref="CDD:432810"
     CDS             1..334
                     /gene="LOC107934490"
                     /coded_by="XM_041088036.1:155..1159"
                     /db_xref="GeneID:107934490"
ORIGIN      
        1 mhnlrhlisr lsstkkpisi qfepfqalgs rafsstsdgs dnlgwgtass wssrltkdhf
       61 dgtitpqaga gdadqsiqlm dienvsdavk kwnaddkkfk eftdgwedrl letsvllkqv
      121 lepgargsyl kdsekaemyr lhkenpevyt vqklakdyri mrqrveailw lkkdeeelek
      181 knalplddsv emlldncpef lnahdrefhv aslpykpefk vmpegwdgtt kdldeyhyei
      241 skkeddmlyd efvqrfnfnk mkmagevkrh kysrrrpteg wnftvekmga kgkrgggggw
      301 kfvslpdgss rplnemekmy vrretprrrr rilp
//
LOCUS       XP_016722424             334 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016722424
VERSION     XP_016722424.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722424.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..334
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=38651
     Region          <136..>165
                     /region_name="MRP-L20"
                     /note="Mitochondrial ribosomal protein subunit L20;
                     pfam12824"
                     /db_xref="CDD:432810"
     CDS             1..334
                     /gene="LOC107934490"
                     /coded_by="XM_016866935.2:163..1167"
                     /db_xref="GeneID:107934490"
ORIGIN      
        1 mhnlrhlisr lsstkkpisi qfepfqalgs rafsstsdgs dnlgwgtass wssrltkdhf
       61 dgtitpqaga gdadqsiqlm dienvsdavk kwnaddkkfk eftdgwedrl letsvllkqv
      121 lepgargsyl kdsekaemyr lhkenpevyt vqklakdyri mrqrveailw lkkdeeelek
      181 knalplddsv emlldncpef lnahdrefhv aslpykpefk vmpegwdgtt kdldeyhyei
      241 skkeddmlyd efvqrfnfnk mkmagevkrh kysrrrpteg wnftvekmga kgkrgggggw
      301 kfvslpdgss rplnemekmy vrretprrrr rilp
//
LOCUS       XP_040943971             168 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 2/3 complex subunit 4 [Gossypium hirsutum].
ACCESSION   XP_040943971
VERSION     XP_040943971.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088037.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="actin-related protein 2/3 complex subunit 4"
                     /calculated_mol_wt=19485
     Region          1..166
                     /region_name="ARPC4"
                     /note="ARP2/3 complex 20 kDa subunit (ARPC4); pfam05856"
                     /db_xref="CDD:461760"
     CDS             1..168
                     /gene="LOC107934431"
                     /coded_by="XM_041088037.1:197..703"
                     /db_xref="GeneID:107934431"
ORIGIN      
        1 mastlrlylt cirntleaam clqnfpcqev erhnkpevel ktspelllnp vlicrneaek
       61 clietsinsl rislkvkqad elenilakkf lrflsmraea fqvlrrkpvq gydisflitn
      121 yhceelqkqk lidfivqfme didkeiselk msvstrgrlv ateflkqf
//
LOCUS       XP_016722349             168 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 2/3 complex subunit 4 [Gossypium hirsutum].
ACCESSION   XP_016722349
VERSION     XP_016722349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="actin-related protein 2/3 complex subunit 4"
                     /calculated_mol_wt=19485
     Region          1..166
                     /region_name="ARPC4"
                     /note="ARP2/3 complex 20 kDa subunit (ARPC4); pfam05856"
                     /db_xref="CDD:461760"
     CDS             1..168
                     /gene="LOC107934431"
                     /coded_by="XM_016866860.2:216..722"
                     /db_xref="GeneID:107934431"
ORIGIN      
        1 mastlrlylt cirntleaam clqnfpcqev erhnkpevel ktspelllnp vlicrneaek
       61 clietsinsl rislkvkqad elenilakkf lrflsmraea fqvlrrkpvq gydisflitn
      121 yhceelqkqk lidfivqfme didkeiselk msvstrgrlv ateflkqf
//
LOCUS       XP_016722351             168 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 2/3 complex subunit 4 [Gossypium hirsutum].
ACCESSION   XP_016722351
VERSION     XP_016722351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866862.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="actin-related protein 2/3 complex subunit 4"
                     /calculated_mol_wt=19485
     Region          1..166
                     /region_name="ARPC4"
                     /note="ARP2/3 complex 20 kDa subunit (ARPC4); pfam05856"
                     /db_xref="CDD:461760"
     CDS             1..168
                     /gene="LOC107934431"
                     /coded_by="XM_016866862.2:75..581"
                     /db_xref="GeneID:107934431"
ORIGIN      
        1 mastlrlylt cirntleaam clqnfpcqev erhnkpevel ktspelllnp vlicrneaek
       61 clietsinsl rislkvkqad elenilakkf lrflsmraea fqvlrrkpvq gydisflitn
      121 yhceelqkqk lidfivqfme didkeiselk msvstrgrlv ateflkqf
//
LOCUS       XP_040943972             309 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g04980 [Gossypium hirsutum].
ACCESSION   XP_040943972
VERSION     XP_040943972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088038.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="uncharacterized protein At4g04980"
                     /calculated_mol_wt=34576
     CDS             1..309
                     /gene="LOC107934461"
                     /coded_by="XM_041088038.1:727..1656"
                     /db_xref="GeneID:107934461"
ORIGIN      
        1 mapkrsigvp pppppsvpag rllsrqqsvg klkkssimss lfrelktkle gsrlqiklss
       61 rtkkqfggsa ggkeglaafl reltkrspff qkieedaqnh aktilelkaa insfqtkdmt
      121 elikfqqhme ailevltden qvlakfedfp ikkletiraa aalysksnlv vsnlknwevk
      181 spaaqllnkf dcyftkvkee ldafertkde esrnfkshgi dfdfnifvti kelmvdvssn
      241 cmelvlkewg etkgandaek kanknllwra fklafrvysf aggnderadk lakelanevl
      301 cgsssppkp
//
LOCUS       XP_016722402            1614 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016722402
VERSION     XP_016722402.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866913.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722402.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1614
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=186467
     Region          9..359
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          624..668
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          979..1073
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1116..1197
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     Region          1414..1594
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..1614
                     /gene="LOC107934477"
                     /coded_by="XM_016866913.2:343..5187"
                     /db_xref="GeneID:107934477"
ORIGIN      
        1 mdysfsdtal rlllfcaeai enrdlksada fllvililad krhywfrdds ivvkyfayal
       61 vsrayglhpa ssyftfpvdp apyyqynsch ingvikkvid dalmgnrrlh lidfnipyyg
      121 fegsvlstlp nffcdrlrvr vsyilppflk eyvefsrqme fltedakevn veledelkvv
      181 ygnslaevde ceidfkrrrd demvvvyykf kleklvrdak amkrelvrlk einptiviil
      241 dfysnhsdsd fltcfkdsfq yslktldywq eldryldgkk ewefnieage gnniirrhpt
      301 ltewqhlfst agfsriplnh rkdnlsvedn sflkimreee eclilgykgc pmfflsawkp
      361 kvedghfnsn stnykfdqgf npnplplqpl qpfpegsiln rlaalaeihn iskdlcckyk
      421 lslaltwask vnnmngtisd pnkkhtffiq snycyvkdrk sydfmfgfer misvpifeka
      481 fesrdgyhfe psltevedfk yfmlkdcnid valaiclqnl htsdevyvve fywpptesei
      541 skslalrifd dlkhmkttfv tvkvqgpeik fqeeaissip tssntamplk iaeeargira
      601 keinahieqi vetkrnkqrk lrskvwvdfh kseeegkqva kckhcpkvlt gssksgtthl
      661 nnhskvcpgk kkqnqesqli lpvdtnerss tfdqershla lvkmvirqqy pldlagqeaf
      721 knfvkglqpm yefqsrdkll sdihriynee reklqlyfdq lacklnltvs lsknnhgkta
      781 yccliahfid dswelkmktl glrtlehind tkavggiiqs lvsewnignk vcsitvdnsf
      841 lddsmvqqik enclsnlvsl ssthwfinct lledgfremd dllfklkksi eyvtetkhgr
      901 lkfqeavdqv klqdgkswdd lslklasdfg ildsalrsre ifckleqidg nfklnpsmee
      961 wenaaalqsc lrcfddikgt qsltvslyll klcdiymkfl qleksnpsfv tlmkrrfdhy
     1021 wrlcnsalav asvldprlkf kvvefsykvi yghdskvqln tfrevltnvy neyanetknq
     1081 ttsasvlddi nwpgnnsiwd sfskfvtase asskselely ldehlipmdg aifdilgwws
     1141 dksqmfpila kmardflaip vsifipcsni katinnpayn ilnpesmeal vcsenwletp
     1201 kgndgenhep tqtmdkgkrk ldedtcvrkk skpsncekai stedidkdsn nndepageis
     1261 igklqtenss rngcygetss gnkskasnkm mgtislraih qekssselnh grnvedvssg
     1321 dsssdndqsd qlqssssesd veitlkeqgs wseqdikayl lseftekene lidkwqknel
     1381 kgkmigrdky fkiqgeklap llmvpqgdet reeyyiedlv vntffellkk rsdkfpnvyi
     1441 nhysfgsqia tqliegprte qevlawvkvd elrgvhkmfl pmslskhwvl fyvdtkekki
     1501 swldpiassr irsynvekdi ilqwfttlll pklgyvdake wpflvrndip eqknlvdcav
     1561 fvmkygdclt hgdyfpfkqe dmvhfrrrif vdiyrgrihk kktkidalfr nskl
//
LOCUS       XP_040943973            1367 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943973
VERSION     XP_040943973.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088039.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1367
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=157164
     Region          9..359
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     Region          624..668
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          979..1073
                     /region_name="DUF4413"
                     /note="Domain of unknown function (DUF4413); pfam14372"
                     /db_xref="CDD:433913"
     Region          1116..1197
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..1367
                     /gene="LOC107934477"
                     /coded_by="XM_041088039.1:347..4450"
                     /db_xref="GeneID:107934477"
ORIGIN      
        1 mdysfsdtal rlllfcaeai enrdlksada fllvililad krhywfrdds ivvkyfayal
       61 vsrayglhpa ssyftfpvdp apyyqynsch ingvikkvid dalmgnrrlh lidfnipyyg
      121 fegsvlstlp nffcdrlrvr vsyilppflk eyvefsrqme fltedakevn veledelkvv
      181 ygnslaevde ceidfkrrrd demvvvyykf kleklvrdak amkrelvrlk einptiviil
      241 dfysnhsdsd fltcfkdsfq yslktldywq eldryldgkk ewefnieage gnniirrhpt
      301 ltewqhlfst agfsriplnh rkdnlsvedn sflkimreee eclilgykgc pmfflsawkp
      361 kvedghfnsn stnykfdqgf npnplplqpl qpfpegsiln rlaalaeihn iskdlcckyk
      421 lslaltwask vnnmngtisd pnkkhtffiq snycyvkdrk sydfmfgfer misvpifeka
      481 fesrdgyhfe psltevedfk yfmlkdcnid valaiclqnl htsdevyvve fywpptesei
      541 skslalrifd dlkhmkttfv tvkvqgpeik fqeeaissip tssntamplk iaeeargira
      601 keinahieqi vetkrnkqrk lrskvwvdfh kseeegkqva kckhcpkvlt gssksgtthl
      661 nnhskvcpgk kkqnqesqli lpvdtnerss tfdqershla lvkmvirqqy pldlagqeaf
      721 knfvkglqpm yefqsrdkll sdihriynee reklqlyfdq lacklnltvs lsknnhgkta
      781 yccliahfid dswelkmktl glrtlehind tkavggiiqs lvsewnignk vcsitvdnsf
      841 lddsmvqqik enclsnlvsl ssthwfinct lledgfremd dllfklkksi eyvtetkhgr
      901 lkfqeavdqv klqdgkswdd lslklasdfg ildsalrsre ifckleqidg nfklnpsmee
      961 wenaaalqsc lrcfddikgt qsltvslyll klcdiymkfl qleksnpsfv tlmkrrfdhy
     1021 wrlcnsalav asvldprlkf kvvefsykvi yghdskvqln tfrevltnvy neyanetknq
     1081 ttsasvlddi nwpgnnsiwd sfskfvtase asskselely ldehlipmdg aifdilgwws
     1141 dksqmfpila kmardflaip vsifipcsni katinnpayn ilnpesmeal vcsenwletp
     1201 kgndgenhep tqtmdkgkrk ldedtcvrkk skpsncekai stedidkdsn nndepageis
     1261 igklqtenss rngcygetss gnkskasnkm mgtislraih qekssselnh grnvedvssg
     1321 dsssdndqsd qlqssssesd veitlkeqgs wilrhiysrs llkrrmn
//
LOCUS       XP_040943974             146 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040943974
VERSION     XP_040943974.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088040.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..146
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16256
     Region          69..113
                     /region_name="Ribosomal_L37e"
                     /note="Ribosomal protein L37e; pfam01907"
                     /db_xref="CDD:460380"
     CDS             1..146
                     /gene="LOC107934447"
                     /coded_by="XM_041088040.1:16..456"
                     /db_xref="GeneID:107934447"
ORIGIN      
        1 mqqahnqtgv wfavitlqpe svtgrltplr viaitapqrg lgiplafhlf fsifcphqas
       61 esptfpfqgk gtgsfgkrrn kthtlcvrcg rrsfhlqksr csacafpaar krtlycssfd
      121 rnkyqlalqr fglfsavvvv vlldvw
//
LOCUS       XP_016722395             519 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016722395
VERSION     XP_016722395.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866906.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722395.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..519
                     /product="O-fucosyltransferase 1"
                     /calculated_mol_wt=58882
     Region          90..415
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(98..101,259,261,333..335,376,395,398..399)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..519
                     /gene="LOC107934475"
                     /coded_by="XM_016866906.2:139..1698"
                     /db_xref="GeneID:107934475"
ORIGIN      
        1 mrrpglhrqh gkqgggskgi yakltvvvvv llictfsvff satisgnrgs lepseinvee
       61 lwesaksggw rpssaprsdw ppppketngy lrvrcnggln qqrsaicnav laarimnatl
      121 vlpeldansf whddsgfqgi ydvehfiqtl kydvrivesi peihkngktk kikahqirpp
      181 rdapiswytt valkkmkehg aiyltpfshr laeeidnaey qrlrcrvnyh alrfkpnimr
      241 lsesivdklr arghfmsihl rfemdmlafa gcfdifspee qsvlkkyrkd nfadkrlvyn
      301 erraigkcpl tpeevglvlr avgfdnstwi ylaagelfgg erfmkpfrdl fprlenhssv
      361 dsseelvant rgllgsavdy mvcllsdifm ptydgpsnfa nnllghrlyy gfrttirpdr
      421 kglapifidr engqtagfeq avrrvmlktn fggphkrvpp esfytnswpe cfcqmspsnp
      481 adkcppdnvl eilesqlene vnrdlealme tnstrrtei
//
LOCUS       XP_016722422             457 aa            linear   PLN 06-AUG-2024
DEFINITION  TBC1 domain family member 13 [Gossypium hirsutum].
ACCESSION   XP_016722422
VERSION     XP_016722422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866933.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..457
                     /product="TBC1 domain family member 13"
                     /calculated_mol_wt=51455
     Region          234..422
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     CDS             1..457
                     /gene="LOC107934488"
                     /coded_by="XM_016866933.2:142..1515"
                     /db_xref="GeneID:107934488"
ORIGIN      
        1 mvrkrvpdwl nsslwsttpa ddglhrysps pttttttssa tvseptlqpp atvpppaaas
       61 kpqstptspk leirdpvnkn snnnsggndq ngdssgvspd disrqaqlla elskkvinmw
      121 elrriasqgi pdgagirstv wklllgylpp drsqwssela kkrsqyrhfk eellmnpsei
      181 trrleksvgc dndeskpegr gllsrsqith gehplslgks svwnqffqds eiieqidrdv
      241 mrthpdmhff sgdsqlakfn qdamrniliv faklnpgiry vqgmneilap lfyvfkndpd
      301 vemaanaead tffcfvells gfrdhfcqql dnsnvgirst itrlsqllke hdeelwrhle
      361 vttkvnpqfy afrwitlllt qefnfadglh iwdtllsdpe gpletllrvc camlilirrr
      421 llagdftsnl kllqhypsan ishllyvank lrtqaig
//
LOCUS       XP_016722345             686 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g04840 [Gossypium
            hirsutum].
ACCESSION   XP_016722345
VERSION     XP_016722345.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866856.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..686
                     /product="pentatricopeptide repeat-containing protein
                     At1g04840"
                     /calculated_mol_wt=77130
     Region          <66..684
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          114..141
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          187..211
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          220..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          248..277
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          279..307
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          354..378
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          382..409
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          415..445
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          451..477
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          483..511
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..686
                     /gene="LOC107934426"
                     /coded_by="XM_016866856.2:38..2098"
                     /db_xref="GeneID:107934426"
ORIGIN      
        1 mkslrllfer nsspakttss sskfkrpkps sisngsdssq ssssqdplkt hfsslikste
       61 ttlqlrqiha qilrrhlsss anlttllisv ssslksipya lsifndshhk slflfnalir
      121 gltenshfqs svshfllmlr hrvrpdklty pfvlksvagl glrflglilh griikcgvef
      181 dsfvrvslve myvkleemgf alqvfdespe rnksesillw nvlingcckv gnlekamelf
      241 eampernigs wnsfinglmk ngdlnkamql fdemkekdvv swttivngls qngdhqkals
      301 mffkmlevgl rpndltlvsa lsacakigal eagvrihnyf venglrlnka taaalvdmya
      361 kcgnilsask vfevtkekdi rtwsvmiwgw athgfygqai rcfkkmmfsg ikpdavvfla
      421 lltacshsgq vdlglnffds mrfdysiept mkhytlvvdl lgragrldea mkfiqrmpis
      481 pdfvawgalf cacrahknik maelvsekll qlepkhpgsy vflsnvyaav grwedvervr
      541 mlmqnqavgk dpgwsyievn gqvhsfvagd hdhkrareiy lkleeivsga reqgympetg
      601 wvlhnieeee kedalgshse klalafalmn tspgttiriv knlricgdch slmkcaskms
      661 qreiilrdik rfhhfkygvc scgdyw
//
LOCUS       XP_016722416             366 aa            linear   PLN 06-AUG-2024
DEFINITION  UV radiation resistance-associated gene protein isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016722416
VERSION     XP_016722416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..366
                     /product="UV radiation resistance-associated gene protein
                     isoform X1"
                     /calculated_mol_wt=41054
     CDS             1..366
                     /gene="LOC107934486"
                     /coded_by="XM_016866927.2:287..1387"
                     /db_xref="GeneID:107934486"
ORIGIN      
        1 menreqardk tlitdpkkin aahenvqlie wedfdnelar lwsltsalke anekkqslqe
       61 klqsliqvkn eslnklnele emrerleark vvmanmstrc kvatedakkq eemlstevrs
      121 llvagtslsv arkrlqeanr llteergcvk lknvqrklra rqqymisqvs llypvkilvg
      181 paqeqelesy ssssrlgnps askpvnqgsl tilglnltll pftkmsfftd kkevqrsata
      241 lgyvahavsl iasylqvplr yplrlggsrs yindhassid passdlsldt tlsanvklae
      301 fplflegqdt traayavfll nkvgktvhvc ssaftahfms livdnlasii inimvelfgr
      361 ywiyni
//
LOCUS       XP_016722417             360 aa            linear   PLN 06-AUG-2024
DEFINITION  UV radiation resistance-associated gene protein isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016722417
VERSION     XP_016722417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..360
                     /product="UV radiation resistance-associated gene protein
                     isoform X2"
                     /calculated_mol_wt=40363
     CDS             1..360
                     /gene="LOC107934486"
                     /coded_by="XM_016866928.2:287..1369"
                     /db_xref="GeneID:107934486"
ORIGIN      
        1 menreqardk tlitdpkkin aahenvqlie wedfdnelar lwsltsalke anekkqslqe
       61 klqsliqvkn eslnklnele emrerleark vvmanmstrc kvatedakkq eemlstevrs
      121 llvagtslsv arkrlqeanr llteergcvk lknvqrklra rqqymisqvs llypvkilvg
      181 paqeqelesy ssssrlgnps askpvnqgsl tilglnltll pftkmsfftd kkevqrsata
      241 lgyvahavsl iasylqvplr yplrlggsrs yindhassid passdlsldt tlsanvklae
      301 fplflegqdt traayavfll nkdieqllnf igvkslgprh vlanlkellr svqsseyidt
//
LOCUS       XP_040943975             396 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21-like [Gossypium hirsutum].
ACCESSION   XP_040943975
VERSION     XP_040943975.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088041.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="receptor like protein 21-like"
                     /calculated_mol_wt=44224
     Region          18..>283
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          20..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..396
                     /gene="LOC121214420"
                     /coded_by="XM_041088041.1:13..1203"
                     /db_xref="GeneID:121214420"
ORIGIN      
        1 msnnsfegsi pmefcklnrl efldlsqnnl sgsipscfnp pyiehvhlhg nrlrgplsla
       61 fynsssivtl dlrgnnltgs ipkwiytlss lsvlllkdnh fhgkvpvelc klhslsiidl
      121 sqnmfsgpip sclgnlslpm qtnkiletgf yvtfieehet tpmdsyypds yleevieftt
      181 ksglflykgn ilsymtgidl scnnltghip pelgnlseih slnlshnklt gvipssfskl
      241 hqiesldlsy nnlsgeipnp lvelnslevf svafnnlsgs ipepkaqfgt fiensyegnp
      301 flcgvilhks csktdspsti stvsedkred glidtydfcv sflvsyvvvl ltifvvlyin
      361 pywrrawfsl vgkcittcry snvgnfltyh ifkrcv
//
LOCUS       XP_040943976            1431 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 14 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943976
VERSION     XP_040943976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088042.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1431
                     /product="receptor-like protein 14 isoform X1"
                     /calculated_mol_wt=161301
     Region          36..76
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          65..>639
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          112..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          193..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          217..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          293..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          395..421
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..>1015
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          422..445
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..498
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          499..520
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          523..572
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          548..567
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          601..624
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          625..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..674
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          675..698
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          699..723
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          724..747
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          748..770
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          773..805
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          798..>1339
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          826..850
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          875..899
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          900..923
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          924..947
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          948..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          972..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1000..1023
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1024..1047
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1048..1070
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1071..1094
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1143..1164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1183..1253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1254..1277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1278..1299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1431
                     /gene="LOC107942609"
                     /coded_by="XM_041088042.1:108..4403"
                     /db_xref="GeneID:107942609"
ORIGIN      
        1 mmmmmmmewk wlwfirmavm llvfegcrwc tidacleher iallhlkpff nsrdelkswv
       61 evkgsdcckw ervecntttr rliqlslnyt kwefnveywy lnasmflpfe elrslylsen
      121 aiagcieneg fgklsstlsn leildlsyny lndsillsls elsslryldl synrferssh
      181 prgfqwlsrl tkletlhlsg nslknsiflq mrnlsslktl slrrnqlggk llhiqelnhl
      241 anlkyldlsd nqiesisnkd gtqlrltnle elylggnlfr nntisflqgl sslksltltn
      301 nhlqgsldtk glsnltnlkk lnlggnqies fqsfkdggrk lelthleeln ldgnlfntsv
      361 faslnklsnl kslsiwdngl kgsidmkdle afinlreldm ggnelkdlvi hqdgtqlrlt
      421 nleeldlsgn lfrnntisfl qglsslkslt lfnnrlqgsl dtkglsnltn lkkldlsgnq
      481 iesfqsfkdg grklelthle elnldgnlfn tsvfaslnkl snlkslsirf nqlkgsidmk
      541 dleafiklre lymggnelkd lvihqglsnl tnlkkldlsg nqiesfqsfk dggrklelth
      601 leelnldynh fntsvfasln klsnlkslsi ranglkgsid mkdleafinl reldmrynel
      661 kdlvihqdsn vsssleeiyl dystlntnil qsigvfaslk tlylsdcgli gplpnqgwcd
      721 lrnlevldvs enalegmlph cfsnltslre ldisrnhfqi plsfapfanl snlkalside
      781 nkmvlepsfy tsipkfqlev islskcitsq qlsrkvptfl yyqydlryvd lsrnnfsgtv
      841 ptwllenntk ledlilkgns ftgplslssa lisnvssidl senklqgqip tgicstfphl
      901 rrlflsknaf egiiplclsg mkdlsfldls nnqlygkvpe elitkgslti lrlsnnnlsg
      961 nvvpvilsan glenlyldgn nfsgemtnvd vstfefpnsl seidlsnnkl hgklprwign
     1021 asflqrlams nnsfegsipm efcklnrlef ldlsqnnlsg sipscfnppy iehvhlhgnr
     1081 lrgplslafy nsssivtldl rgnnltgsip kwiytlssls vlllkdnhfh gkvpvelckl
     1141 hslsiidlsq nmfsgpipsc lgnlslpmqr kkileigffg psieehettr smilnlgmds
     1201 yypssyleev iefttksgfy sykgdilsym tgidlscnnl tghippelgn lseihslnls
     1261 hnkltgvips slsklhqies ldlsynnlsg eipnqlveln slevfsvafn nlsgsipepk
     1321 aqfgtfiens yqgnpflcgv ilhkscsktd spstistvse dkgedglidt ydfcvsflvs
     1381 yvvvlltifv vlyinpywrr awfslvgkci ttcrysnvgn fltyhifkrc v
//
LOCUS       XP_040943977            1269 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 14 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943977
VERSION     XP_040943977.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088043.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1269
                     /product="receptor-like protein 14 isoform X2"
                     /calculated_mol_wt=142556
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <67..183
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..>802
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          247..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..385
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          386..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..487
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          488..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          512..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          539..558
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..583
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..610
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          636..>1177
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          664..688
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          713..737
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          738..761
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          762..785
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          786..809
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          810..837
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          838..861
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          862..885
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          886..908
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          909..932
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          981..1002
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1021..1091
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1092..1115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1116..1137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1269
                     /gene="LOC107942609"
                     /coded_by="XM_041088043.1:51..3860"
                     /db_xref="GeneID:107942609"
ORIGIN      
        1 mmmmewnwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntnnr nlnawylnts mflpfeelks
      121 lylrgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlssnk
      181 iegsghqrgl nnlsnlkyld lswnriesis nkglnnlsnl kyldlsgnni esisnqgfqw
      241 lsrltkletl rlsgnslkns slsgnqlggk llhiqelnhl anlkyldlsg nkiesisnkd
      301 gtqlrltnle eldlsgnlfr nntisflqgl sslksltlfn nrlqgsldtk glsnltnlkk
      361 lhldgnqies fqsfkdggrk lelthleeln ldgnhfntsv faslnklsnl kslsirengl
      421 kgsidmkdle afinlreldm gnnelkdlvi hqglsnltnl kkldlsgnqi esfqsfkdgg
      481 rklelthlee lnldfnhfnt svfaslnkls nlkslsiwgn glkgsidmkd leafinlrel
      541 ymggnelkdl vihqgwcdlr nlevldvsen alegmlphcf snltslreld isrnhfqipl
      601 sfapfanlsn lkalsidenk mvlepsfyts ipkfqlevis lskcitsqql srkvptflyy
      661 qydlryvdls rnnfsgtvpt wllenntkle dlilkgnsft gplslssali snvssidlse
      721 nklqgqiptg icstfphlrr lflsknafeg iiplclsgmk dlsfldlsnn qlygkvpeel
      781 itkgsltilr lsnnnlsgnv vpvilsangl enlyldgnnf sgemtnvdvs tfefpnslse
      841 idlsnnklhg klprwignas flqrlamsnn sfegsipmef cklnrlefld lsqnnlsgsi
      901 pscfnppyie hvhlhgnrlr gplslafyns ssivtldlrg nnltgsipkw iytlsslsvl
      961 llkdnhfhgk vpvelcklhs lsiidlsqnm fsgpipsclg nlslpmqrkk ileigffgps
     1021 ieehettrsm ilnlgmdsyy pssyleevie fttksgfysy kgdilsymtg idlscnnltg
     1081 hippelgnls eihslnlshn kltgvipssl sklhqiesld lsynnlsgei pnqlvelnsl
     1141 evfsvafnnl sgsipepkaq fgtfiensyq gnpflcgvil hkscsktdsp stistvsedk
     1201 gedglidtyd fcvsflvsyv vvlltifvvl yinpywrraw fslvgkcitt crysnvgnfl
     1261 tyhifkrcv
//
LOCUS       XP_040943978            1182 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943978
VERSION     XP_040943978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088044.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1182
                     /product="receptor-like protein 13 isoform X3"
                     /calculated_mol_wt=132979
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          115..>766
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          271..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          323..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..400
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          401..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          425..474
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..471
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          475..496
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          499..523
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          524..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          549..>1090
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          577..601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..650
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          651..674
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          675..698
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          699..722
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          723..750
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          751..774
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          775..798
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          799..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          822..845
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          894..915
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          934..1004
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1005..1028
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1029..1050
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1182
                     /gene="LOC107942609"
                     /coded_by="XM_041088044.1:51..3599"
                     /db_xref="GeneID:107942609"
ORIGIN      
        1 mmmmewnwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntnnr nlnawylnts mflpfeelks
      121 lylrgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlssnk
      181 iegsghqrgl nnlsnlkyld lswnriesis nkdgtqlrlt nleeldlsgn lfrnntisfl
      241 qglsslkslt lfnnrlqgsl dtkglsnltn lkklhldgnq iesfqsfkdg grklelthle
      301 elnldgnhfn tsvfaslnkl snlkslsire nglkgsidmk dleafinlre ldmgnnelkd
      361 lvihqglsnl tnlkkldlsg nqiesfqsfk dggrklelth leelnldfnh fntsvfasln
      421 klsnlkslsi wgnglkgsid mkdleafinl relymggnel kdlvihqgwc dlrnlevldv
      481 senalegmlp hcfsnltslr eldisrnhfq iplsfapfan lsnlkalsid enkmvlepsf
      541 ytsipkfqle vislskcits qqlsrkvptf lyyqydlryv dlsrnnfsgt vptwllennt
      601 kledlilkgn sftgplslss alisnvssid lsenklqgqi ptgicstfph lrrlflskna
      661 fegiiplcls gmkdlsfldl snnqlygkvp eelitkgslt ilrlsnnnls gnvvpvilsa
      721 nglenlyldg nnfsgemtnv dvstfefpns lseidlsnnk lhgklprwig nasflqrlam
      781 snnsfegsip mefcklnrle fldlsqnnls gsipscfnpp yiehvhlhgn rlrgplslaf
      841 ynsssivtld lrgnnltgsi pkwiytlssl svlllkdnhf hgkvpvelck lhslsiidls
      901 qnmfsgpips clgnlslpmq rkkileigff gpsieehett rsmilnlgmd syypssylee
      961 viefttksgf ysykgdilsy mtgidlscnn ltghippelg nlseihslnl shnkltgvip
     1021 sslsklhqie sldlsynnls geipnqlvel nslevfsvaf nnlsgsipep kaqfgtfien
     1081 syqgnpflcg vilhkscskt dspstistvs edkgedglid tydfcvsflv syvvvlltif
     1141 vvlyinpywr rawfslvgkc ittcrysnvg nfltyhifkr cv
//
LOCUS       XP_040943979            1167 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943979
VERSION     XP_040943979.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088045.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1167
                     /product="receptor like protein 21 isoform X4"
                     /calculated_mol_wt=131082
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          62..>700
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          247..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..385
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          386..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..456
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          484..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          509..541
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..>1075
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          562..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          636..659
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          660..683
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          684..707
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          708..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          736..759
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          760..783
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          784..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..830
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          879..900
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          919..989
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          990..1013
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1014..1035
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1167
                     /gene="LOC107942609"
                     /coded_by="XM_041088045.1:51..3554"
                     /db_xref="GeneID:107942609"
ORIGIN      
        1 mmmmewnwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntnnr nlnawylnts mflpfeelks
      121 lylrgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlssnk
      181 iegsghqrgl nnlsnlkyld lswnriesis nkglnnlsnl kyldlsgnni esisnqgfqw
      241 lsrltkletl rlsgnslkns slsgnqlggk llhiqelnhl anlkyldlsg nkiesisnkd
      301 gtqlrltnle eldlsgnlfr nntisflqgl sslksltlfn nrlqgsldtk glsnltnlkk
      361 ldlsgnqies fqsfkdggrk lelthleeln ldfnhfntsv faslnklsnl kslsiwgngl
      421 kgsidmkdle afinlrelym ggnelkdlvi hqgwcdlrnl evldvsenal egmlphcfsn
      481 ltslreldis rnhfqiplsf apfanlsnlk alsidenkmv lepsfytsip kfqlevisls
      541 kcitsqqlsr kvptflyyqy dlryvdlsrn nfsgtvptwl lenntkledl ilkgnsftgp
      601 lslssalisn vssidlsenk lqgqiptgic stfphlrrlf lsknafegii plclsgmkdl
      661 sfldlsnnql ygkvpeelit kgsltilrls nnnlsgnvvp vilsanglen lyldgnnfsg
      721 emtnvdvstf efpnslseid lsnnklhgkl prwignasfl qrlamsnnsf egsipmefck
      781 lnrlefldls qnnlsgsips cfnppyiehv hlhgnrlrgp lslafynsss ivtldlrgnn
      841 ltgsipkwiy tlsslsvlll kdnhfhgkvp velcklhsls iidlsqnmfs gpipsclgnl
      901 slpmqrkkil eigffgpsie ehettrsmil nlgmdsyyps syleevieft tksgfysykg
      961 dilsymtgid lscnnltghi ppelgnlsei hslnlshnkl tgvipsslsk lhqiesldls
     1021 ynnlsgeipn qlvelnslev fsvafnnlsg sipepkaqfg tfiensyqgn pflcgvilhk
     1081 scsktdspst istvsedkge dglidtydfc vsflvsyvvv lltifvvlyi npywrrawfs
     1141 lvgkcittcr ysnvgnflty hifkrcv
//
LOCUS       XP_040943980            1167 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 14 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040943980
VERSION     XP_040943980.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088046.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1167
                     /product="receptor-like protein 14 isoform X5"
                     /calculated_mol_wt=131084
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          62..>700
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          247..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..385
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          386..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          484..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          509..541
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..>1075
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          562..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          636..659
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          660..683
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          684..707
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          708..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          736..759
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          760..783
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          784..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..830
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          879..900
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          919..989
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          990..1013
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1014..1035
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1167
                     /gene="LOC107942609"
                     /coded_by="XM_041088046.1:51..3554"
                     /db_xref="GeneID:107942609"
ORIGIN      
        1 mmmmewnwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntnnr nlnawylnts mflpfeelks
      121 lylrgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlssnk
      181 iegsghqrgl nnlsnlkyld lswnriesis nkglnnlsnl kyldlsgnni esisnqgfqw
      241 lsrltkletl rlsgnslkns slsgnqlggk llhiqelnhl anlkyldlsg nkiesisnkd
      301 gtqlrltnle eldlsgnlfr nntisflqgl sslksltlfn nrlqgsldtk glsnltnlkk
      361 lhldgnqies fqsfkdggrk lelthleeln ldgnhfntsv faslnklsnl kslsirengl
      421 kgsidmkdle afinlrelym ggnelkdlvi hqgwcdlrnl evldvsenal egmlphcfsn
      481 ltslreldis rnhfqiplsf apfanlsnlk alsidenkmv lepsfytsip kfqlevisls
      541 kcitsqqlsr kvptflyyqy dlryvdlsrn nfsgtvptwl lenntkledl ilkgnsftgp
      601 lslssalisn vssidlsenk lqgqiptgic stfphlrrlf lsknafegii plclsgmkdl
      661 sfldlsnnql ygkvpeelit kgsltilrls nnnlsgnvvp vilsanglen lyldgnnfsg
      721 emtnvdvstf efpnslseid lsnnklhgkl prwignasfl qrlamsnnsf egsipmefck
      781 lnrlefldls qnnlsgsips cfnppyiehv hlhgnrlrgp lslafynsss ivtldlrgnn
      841 ltgsipkwiy tlsslsvlll kdnhfhgkvp velcklhsls iidlsqnmfs gpipsclgnl
      901 slpmqrkkil eigffgpsie ehettrsmil nlgmdsyyps syleevieft tksgfysykg
      961 dilsymtgid lscnnltghi ppelgnlsei hslnlshnkl tgvipsslsk lhqiesldls
     1021 ynnlsgeipn qlvelnslev fsvafnnlsg sipepkaqfg tfiensyqgn pflcgvilhk
     1081 scsktdspst istvsedkge dglidtydfc vsflvsyvvv lltifvvlyi npywrrawfs
     1141 lvgkcittcr ysnvgnflty hifkrcv
//
LOCUS       XP_040943981            1167 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040943981
VERSION     XP_040943981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088047.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1167
                     /product="receptor like protein 21 isoform X6"
                     /calculated_mol_wt=131093
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          62..>700
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          247..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..385
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          386..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          436..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          484..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          534..>1075
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          534..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..580
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          636..659
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          660..683
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          684..707
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          708..735
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          736..759
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          760..783
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          784..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..830
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          879..900
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          919..989
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          990..1013
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1014..1035
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1167
                     /gene="LOC107942609"
                     /coded_by="XM_041088047.1:51..3554"
                     /db_xref="GeneID:107942609"
ORIGIN      
        1 mmmmewnwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntnnr nlnawylnts mflpfeelks
      121 lylrgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlssnk
      181 iegsghqrgl nnlsnlkyld lswnriesis nkglnnlsnl kyldlsgnni esisnqgfqw
      241 lsrltkletl rlsgnslkns slsgnqlggk llhiqelnhl anlkyldlsg nkiesisnkd
      301 gtqlrltnle eldlsgnlfr nntisflqgl sslksltlfn nrlqgsldtk glsnltnlkk
      361 lhldgnqies fqsfkdggrk lelthleeln ldgnhfntsv faslnklsnl kslsirengl
      421 kgsidmkdle afinlreldm gnnelkdlvi hqgwcdlrnl evldvsenal egmlphcfsn
      481 ltslreldis rnhfqiplsf apfanlsnlk alsidenkmv lepsfytsip kfqlevisls
      541 kcitsqqlsr kvptflyyqy dlryvdlsrn nfsgtvptwl lenntkledl ilkgnsftgp
      601 lslssalisn vssidlsenk lqgqiptgic stfphlrrlf lsknafegii plclsgmkdl
      661 sfldlsnnql ygkvpeelit kgsltilrls nnnlsgnvvp vilsanglen lyldgnnfsg
      721 emtnvdvstf efpnslseid lsnnklhgkl prwignasfl qrlamsnnsf egsipmefck
      781 lnrlefldls qnnlsgsips cfnppyiehv hlhgnrlrgp lslafynsss ivtldlrgnn
      841 ltgsipkwiy tlsslsvlll kdnhfhgkvp velcklhsls iidlsqnmfs gpipsclgnl
      901 slpmqrkkil eigffgpsie ehettrsmil nlgmdsyyps syleevieft tksgfysykg
      961 dilsymtgid lscnnltghi ppelgnlsei hslnlshnkl tgvipsslsk lhqiesldls
     1021 ynnlsgeipn qlvelnslev fsvafnnlsg sipepkaqfg tfiensyqgn pflcgvilhk
     1081 scsktdspst istvsedkge dglidtydfc vsflvsyvvv lltifvvlyi npywrrawfs
     1141 lvgkcittcr ysnvgnflty hifkrcv
//
LOCUS       XP_040943982            1187 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943982
VERSION     XP_040943982.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088048.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1187
                     /product="receptor like protein 21 isoform X1"
                     /calculated_mol_wt=133783
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <67..183
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..>814
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          223..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          374..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..473
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          474..495
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          498..522
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          523..575
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          557..>1089
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          576..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          625..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..697
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          698..721
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          722..749
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..773
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          774..797
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          798..820
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          821..844
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          845..868
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          869..892
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          893..914
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          946..1003
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1004..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1028..1049
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1187
                     /gene="LOC107939059"
                     /coded_by="XM_041088048.1:274..3837"
                     /db_xref="GeneID:107939059"
ORIGIN      
        1 mmmmewkwlr lirmavmllv legcrwcttd acleherial lhlkpffnyg nqlqswvevk
       61 gsdcckwkrv ecntttrrli klslnstrwf dnmgydmdng nlnawylnts mflpfeelks
      121 lylsgnaigg dlenegfgkl sstlsnleil dlsynylnds illslselss lryldlsynq
      181 fegsshprgf qllsrlnnle tldlswnslk nsilfhmrnl sslktlrlrr nqlkgrldhi
      241 qglnnltnlk yldlsdnsie sisnqdgtqw rltnleeldl snnlfrnnti sfpqglsslk
      301 sltlynnslq gsldtkglsn ltnlkkldlr wnqiesfqsf kdleafinlr elymgynelk
      361 dlvihqenkg lrnlkvlfly haftdgsipl qnlvesfssv kafhlqynyl nmtlatqeln
      421 vssnveelyf dgstlntnil qsigvfaslk tlslhdcgli gplpnhgwcd lrnlevldvs
      481 gnalegmlph cfsnltslre lhisanrfqi plsfapfanl snlkvlsgde nkmvmepsfy
      541 tsvpkfqlts islskcitsq qlnlelptfl yyqydlryvd lshnnfsgtv ptwllenntk
      601 levlilmgns ftgplsfssa lisnvssidi senklqgqip tsicstfphl wrlflsknaf
      661 egniplclsv mkdlsfldls nnqlygkvpe eliakgslti lrlsnnklsg nvvpvvlnsn
      721 gvqnlyldgn nfsgemtnvd lstfefpnsi reidlsnnkl hgklprwign asflerlals
      781 nsgfegsipm efcklnrlef ldlsqnhlsg sipscfnppn iehvhlhgnr lrgplslafy
      841 nssslvtldl rgnnltgnip kwidtfssls vlllkdnhfh gkvpiqlckl hslsiidlsq
      901 nmfsgpipsc lgnlslpmqt kkildigiyr qsteedestr imianlgpds yypysyfeev
      961 iefttksgfy sykgdilsym tgidlscnnl tghippelgn lseihslnls hnkltgvips
     1021 sfsklhqies ldlsynnlsg eipnqlveln slevfsvafn nlsgsipepk aqfgtfiens
     1081 yegnpflcgv ilhkscsktd spstistvse dkgedglidt ydfcvsflvs yvvvlltifv
     1141 vlyinpywrr awfslvgkci ttchysnvgn sylshfqamc latqiai
//
LOCUS       XP_040943983            1162 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943983
VERSION     XP_040943983.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088049.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1162
                     /product="receptor-like protein 13 isoform X2"
                     /calculated_mol_wt=130821
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <67..183
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..>789
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          223..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          400..423
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          424..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          473..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          498..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          532..>1064
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          551..575
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          600..624
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          625..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..672
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          673..696
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          697..724
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          725..748
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          749..772
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          773..795
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          796..819
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          820..843
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          844..867
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          868..889
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          921..978
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          979..1002
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1003..1024
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1162
                     /gene="LOC107939059"
                     /coded_by="XM_041088049.1:276..3764"
                     /db_xref="GeneID:107939059"
ORIGIN      
        1 mmmmewkwlr lirmavmllv legcrwcttd acleherial lhlkpffnyg nqlqswvevk
       61 gsdcckwkrv ecntttrrli klslnstrwf dnmgydmdng nlnawylnts mflpfeelks
      121 lylsgnaigg dlenegfgkl sstlsnleil dlsynylnds illslselss lryldlsynq
      181 fegsshprgf qllsrlnnle tldlswnslk nsilfhmrnl sslktlrlrr nqlkgrldhi
      241 qglnnltnlk yldlsdnsie sisnqdgtqw rltnleeldl snnlfrnnti sfpqglsslk
      301 sltlynnslq gsldtkdlea finlrelymg ynelkdlvih qenkglrnlk vlflyhaftd
      361 gsiplqnlve sfssvkafhl qynylnmtla tqelnvssnv eelyfdgstl ntnilqsigv
      421 faslktlslh dcgligplpn hgwcdlrnle vldvsgnale gmlphcfsnl tslrelhisa
      481 nrfqiplsfa pfanlsnlkv lsgdenkmvm epsfytsvpk fqltsislsk citsqqlnle
      541 lptflyyqyd lryvdlshnn fsgtvptwll enntklevli lmgnsftgpl sfssalisnv
      601 ssidisenkl qgqiptsics tfphlwrlfl sknafegnip lclsvmkdls fldlsnnqly
      661 gkvpeeliak gsltilrlsn nklsgnvvpv vlnsngvqnl yldgnnfsge mtnvdlstfe
      721 fpnsireidl snnklhgklp rwignasfle rlalsnsgfe gsipmefckl nrlefldlsq
      781 nhlsgsipsc fnppniehvh lhgnrlrgpl slafynsssl vtldlrgnnl tgnipkwidt
      841 fsslsvlllk dnhfhgkvpi qlcklhslsi idlsqnmfsg pipsclgnls lpmqtkkild
      901 igiyrqstee destrimian lgpdsyypys yfeevieftt ksgfysykgd ilsymtgidl
      961 scnnltghip pelgnlseih slnlshnklt gvipssfskl hqiesldlsy nnlsgeipnq
     1021 lvelnslevf svafnnlsgs ipepkaqfgt fiensyegnp flcgvilhks csktdspsti
     1081 stvsedkged glidtydfcv sflvsyvvvl ltifvvlyin pywrrawfsl vgkcittchy
     1141 snvgnsylsh fqamclatqi ai
//
LOCUS       XP_040943984            1162 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943984
VERSION     XP_040943984.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088050.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1162
                     /product="receptor-like protein 13 isoform X3"
                     /calculated_mol_wt=130764
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <67..183
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..>789
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          223..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          400..423
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          424..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          473..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          498..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          532..>1064
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          551..575
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          600..624
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          625..648
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..672
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          673..696
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          697..724
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          725..748
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          749..772
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          773..795
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          796..819
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          820..843
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          844..867
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          868..889
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          921..978
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          979..1002
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1003..1024
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1162
                     /gene="LOC107939059"
                     /coded_by="XM_041088050.1:277..3765"
                     /db_xref="GeneID:107939059"
ORIGIN      
        1 mmmmewkwlr lirmavmllv legcrwcttd acleherial lhlkpffnyg nqlqswvevk
       61 gsdcckwkrv ecntttrrli klslnstrwf dnmgydmdng nlnawylnts mflpfeelks
      121 lylsgnaigg dlenegfgkl sstlsnleil dlsynylnds illslselss lryldlsynq
      181 fegsshprgf qllsrlnnle tldlswnslk nsilfhmrnl sslktlrlrr nqlkgrldhi
      241 qglnnltnlk yldlsdnsie sisnqdgtqw rltnleeldl snnlfrnnti sfpqglsslk
      301 sltlynnslq gsldtkglsn ltnlkkldlr wnqiesfqsf kenkglrnlk vlflyhaftd
      361 gsiplqnlve sfssvkafhl qynylnmtla tqelnvssnv eelyfdgstl ntnilqsigv
      421 faslktlslh dcgligplpn hgwcdlrnle vldvsgnale gmlphcfsnl tslrelhisa
      481 nrfqiplsfa pfanlsnlkv lsgdenkmvm epsfytsvpk fqltsislsk citsqqlnle
      541 lptflyyqyd lryvdlshnn fsgtvptwll enntklevli lmgnsftgpl sfssalisnv
      601 ssidisenkl qgqiptsics tfphlwrlfl sknafegnip lclsvmkdls fldlsnnqly
      661 gkvpeeliak gsltilrlsn nklsgnvvpv vlnsngvqnl yldgnnfsge mtnvdlstfe
      721 fpnsireidl snnklhgklp rwignasfle rlalsnsgfe gsipmefckl nrlefldlsq
      781 nhlsgsipsc fnppniehvh lhgnrlrgpl slafynsssl vtldlrgnnl tgnipkwidt
      841 fsslsvlllk dnhfhgkvpi qlcklhslsi idlsqnmfsg pipsclgnls lpmqtkkild
      901 igiyrqstee destrimian lgpdsyypys yfeevieftt ksgfysykgd ilsymtgidl
      961 scnnltghip pelgnlseih slnlshnklt gvipssfskl hqiesldlsy nnlsgeipnq
     1021 lvelnslevf svafnnlsgs ipepkaqfgt fiensyegnp flcgvilhks csktdspsti
     1081 stvsedkged glidtydfcv sflvsyvvvl ltifvvlyin pywrrawfsl vgkcittchy
     1141 snvgnsylsh fqamclatqi ai
//
LOCUS       XP_040943985            1087 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040943985
VERSION     XP_040943985.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088051.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1087
                     /product="receptor-like protein 13 isoform X4"
                     /calculated_mol_wt=122672
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          118..>634
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          223..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          374..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          398..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          457..>989
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          476..500
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          525..549
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          550..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          574..597
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          598..621
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          622..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          674..697
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          698..720
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          721..744
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          745..768
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          769..792
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          793..814
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          846..903
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          904..927
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          928..949
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1087
                     /gene="LOC107939059"
                     /coded_by="XM_041088051.1:279..3542"
                     /db_xref="GeneID:107939059"
ORIGIN      
        1 mmmmewkwlr lirmavmllv legcrwcttd acleherial lhlkpffnyg nqlqswvevk
       61 gsdcckwkrv ecntttrrli klslnstrwf dnmgydmdng nlnawylnts mflpfeelks
      121 lylsgnaigg dlenegfgkl sstlsnleil dlsynylnds illslselss lryldlsynq
      181 fegsshprgf qllsrlnnle tldlswnslk nsilfhmrnl sslktlrlrr nqlkgrldhi
      241 qglnnltnlk yldlsdnsie sisnqdgtqw rltnleeldl snnlfrnnti sfpqglsslk
      301 sltlynnslq gsldtkglsn ltnlkkldlr wnqiesfqsf kdleafinlr elymgynelk
      361 dlvihqgwcd lrnlevldvs gnalegmlph cfsnltslre lhisanrfqi plsfapfanl
      421 snlkvlsgde nkmvmepsfy tsvpkfqlts islskcitsq qlnlelptfl yyqydlryvd
      481 lshnnfsgtv ptwllenntk levlilmgns ftgplsfssa lisnvssidi senklqgqip
      541 tsicstfphl wrlflsknaf egniplclsv mkdlsfldls nnqlygkvpe eliakgslti
      601 lrlsnnklsg nvvpvvlnsn gvqnlyldgn nfsgemtnvd lstfefpnsi reidlsnnkl
      661 hgklprwign asflerlals nsgfegsipm efcklnrlef ldlsqnhlsg sipscfnppn
      721 iehvhlhgnr lrgplslafy nssslvtldl rgnnltgnip kwidtfssls vlllkdnhfh
      781 gkvpiqlckl hslsiidlsq nmfsgpipsc lgnlslpmqt kkildigiyr qsteedestr
      841 imianlgpds yypysyfeev iefttksgfy sykgdilsym tgidlscnnl tghippelgn
      901 lseihslnls hnkltgvips sfsklhqies ldlsynnlsg eipnqlveln slevfsvafn
      961 nlsgsipepk aqfgtfiens yegnpflcgv ilhkscsktd spstistvse dkgedglidt
     1021 ydfcvsflvs yvvvlltifv vlyinpywrr awfslvgkci ttchysnvgn sylshfqamc
     1081 latqiai
//
LOCUS       XP_016722365             410 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein 8 [Gossypium hirsutum].
ACCESSION   XP_016722365
VERSION     XP_016722365.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016866876.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016722365.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..410
                     /product="putative receptor-like protein 8"
                     /calculated_mol_wt=45042
     Region          13..>352
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          15..38
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          39..62
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          63..85
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          86..109
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          110..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          198..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..410
                     /gene="LOC107934445"
                     /coded_by="XM_016866876.2:605..1837"
                     /db_xref="GeneID:107934445"
ORIGIN      
        1 manvdvsise fptslreinl gnnkfygnlp rwmgnvsfle rlalsqngfe gsipmefcnm
       61 drlefldlse nnlfgsipsc fntlnikhvh lhgsrlsgpl piafynissl vtldlrgnnl
      121 tgsipkwigt lsslsvlllk dnhfhgevpv qlckldslni idlsqnifsg iipsclgnlt
      181 lptetnkilt swgtspsltg dglpkitlgv yvdyfylgsy feeviefttk sgflpyegni
      241 lsymtgidls cnnltghipp elgnlseiys lnlshnkltg vipssfaklh qiesldlsyn
      301 nlsgeipnql velnslevfs vaynnlsgsi pekaqfgtfi ensyegnlfl cgtilhkscs
      361 kidspsmist vsedkgedgl idtydfcvsf lvsyvavllt ifavlyinpy
//
LOCUS       XP_040943986             283 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 [Gossypium hirsutum].
ACCESSION   XP_040943986
VERSION     XP_040943986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088052.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..283
                     /product="receptor-like protein 56"
                     /calculated_mol_wt=31753
     Region          <79..>191
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          82..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..283
                     /gene="LOC121214421"
                     /coded_by="XM_041088052.1:34..885"
                     /db_xref="GeneID:121214421"
ORIGIN      
        1 mfygfipscl gnltlktkdq ktltsyfvea sdvvedilpy qketrwrgdg lqeypdtyme
       61 ewvqfttksr sysygglile nmtgidlscn kltgqippel gnlsqihsln lsynnltgli
      121 pssfsnlkqi esldlsynsl sgeipnqlve lnslevfnva hnnlsgsipe pkaqfgtfie
      181 ssyegnpflc gailhkscsr inspstisti sddkgedglf dtydfcvsff isyvvvllti
      241 favlyknpyw rrswfsfvgk cittcrfsig gsclayyifk rcv
//
LOCUS       XP_016727839             186 aa            linear   PLN 06-AUG-2024
DEFINITION  dirigent protein 22 [Gossypium hirsutum].
ACCESSION   XP_016727839
VERSION     XP_016727839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872350.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="dirigent protein 22"
                     /calculated_mol_wt=20057
     Region          41..183
                     /region_name="Dirigent"
                     /note="Dirigent-like protein; pfam03018"
                     /db_xref="CDD:460780"
     CDS             1..186
                     /gene="LOC107939065"
                     /coded_by="XM_016872350.2:209..769"
                     /db_xref="GeneID:107939065"
ORIGIN      
        1 matkakfslv fpvssaiflv mllkfastil aaddkvvike tkmtvylhdy aggpnatslp
       61 mvgfpgklws ltqfgtlfvs ddlitqgpel tspmlgrgqg iympmsldgv nayvsfslvf
      121 tnkayngsti qvqgnsnqll avseygvvsg tgkfryatgy itfetlsfdp stfysliran
      181 vsvrhd
//
LOCUS       XP_016727835             644 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727835
VERSION     XP_016727835.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727835.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..644
                     /product="receptor-like protein 13 isoform X1"
                     /calculated_mol_wt=71651
     Region          12..>555
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          42..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..239
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          240..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..380
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          402..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..516
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..644
                     /gene="LOC107939062"
                     /coded_by="XM_016872346.2:2272..4206"
                     /db_xref="GeneID:107939062"
ORIGIN      
        1 mepsfhtlvp kfqlkfisls kcrtsqqlsl elptflyyqn dlrfvdlsqn nfsgtvpswl
       61 lenntkledl ilkgnsftgp ltllstpnsn vssidmfdnk iqgqlptnic stfphleqlf
      121 lsknafqgni ppclsamknl smldlsnnql agkvpqelvr ksslfllrls nnnlkgnvvp
      181 vilnanglqk lyldgnhfsg emtnfdvstf qfptsltdid lsnnrlhgkl prwignmsll
      241 erldlsnngf egsipvefcn lnnfkffdls ennlsgsips cfnppnlehv hlhnnrlggp
      301 lslafnksts lvtldlrgnn ftggipkwig alsslsvlll kanhlrgris vqlctlysls
      361 iidlsqnrfs gpipsclgnl tlpmnkdktm tpdlmsptfs eldelkllkt gilfehmmhs
      421 ysymkesvef ttksgsysyg gdileymsgi dlscneltgq iplelgnlhe ihslnlshnk
      481 lvgvipssfs klkqiesldl synnlsgeip nqlvelnslg vfsvahnnls gsipeqnqfv
      541 tfiessyegn pflcgpmlhi scsktgstst isdderedsf ldtyvfcvsf lasyvvmllt
      601 ivvilyinph wrgvwfsfvg kcisscryst vgnllgyyif rrcv
//
LOCUS       XP_040943987             644 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943987
VERSION     XP_040943987.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088053.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..644
                     /product="receptor-like protein 13 isoform X1"
                     /calculated_mol_wt=71651
     Region          12..>555
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          42..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..239
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          240..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..380
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          402..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..516
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..644
                     /gene="LOC107939062"
                     /coded_by="XM_041088053.1:2684..4618"
                     /db_xref="GeneID:107939062"
ORIGIN      
        1 mepsfhtlvp kfqlkfisls kcrtsqqlsl elptflyyqn dlrfvdlsqn nfsgtvpswl
       61 lenntkledl ilkgnsftgp ltllstpnsn vssidmfdnk iqgqlptnic stfphleqlf
      121 lsknafqgni ppclsamknl smldlsnnql agkvpqelvr ksslfllrls nnnlkgnvvp
      181 vilnanglqk lyldgnhfsg emtnfdvstf qfptsltdid lsnnrlhgkl prwignmsll
      241 erldlsnngf egsipvefcn lnnfkffdls ennlsgsips cfnppnlehv hlhnnrlggp
      301 lslafnksts lvtldlrgnn ftggipkwig alsslsvlll kanhlrgris vqlctlysls
      361 iidlsqnrfs gpipsclgnl tlpmnkdktm tpdlmsptfs eldelkllkt gilfehmmhs
      421 ysymkesvef ttksgsysyg gdileymsgi dlscneltgq iplelgnlhe ihslnlshnk
      481 lvgvipssfs klkqiesldl synnlsgeip nqlvelnslg vfsvahnnls gsipeqnqfv
      541 tfiessyegn pflcgpmlhi scsktgstst isdderedsf ldtyvfcvsf lasyvvmllt
      601 ivvilyinph wrgvwfsfvg kcisscryst vgnllgyyif rrcv
//
LOCUS       XP_040943988             644 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943988
VERSION     XP_040943988.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088054.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..644
                     /product="receptor-like protein 13 isoform X1"
                     /calculated_mol_wt=71651
     Region          12..>555
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          42..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..239
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          240..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..380
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          402..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..516
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..644
                     /gene="LOC107939062"
                     /coded_by="XM_041088054.1:2116..4050"
                     /db_xref="GeneID:107939062"
ORIGIN      
        1 mepsfhtlvp kfqlkfisls kcrtsqqlsl elptflyyqn dlrfvdlsqn nfsgtvpswl
       61 lenntkledl ilkgnsftgp ltllstpnsn vssidmfdnk iqgqlptnic stfphleqlf
      121 lsknafqgni ppclsamknl smldlsnnql agkvpqelvr ksslfllrls nnnlkgnvvp
      181 vilnanglqk lyldgnhfsg emtnfdvstf qfptsltdid lsnnrlhgkl prwignmsll
      241 erldlsnngf egsipvefcn lnnfkffdls ennlsgsips cfnppnlehv hlhnnrlggp
      301 lslafnksts lvtldlrgnn ftggipkwig alsslsvlll kanhlrgris vqlctlysls
      361 iidlsqnrfs gpipsclgnl tlpmnkdktm tpdlmsptfs eldelkllkt gilfehmmhs
      421 ysymkesvef ttksgsysyg gdileymsgi dlscneltgq iplelgnlhe ihslnlshnk
      481 lvgvipssfs klkqiesldl synnlsgeip nqlvelnslg vfsvahnnls gsipeqnqfv
      541 tfiessyegn pflcgpmlhi scsktgstst isdderedsf ldtyvfcvsf lasyvvmllt
      601 ivvilyinph wrgvwfsfvg kcisscryst vgnllgyyif rrcv
//
LOCUS       XP_040943989             644 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943989
VERSION     XP_040943989.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088055.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..644
                     /product="receptor-like protein 13 isoform X1"
                     /calculated_mol_wt=71651
     Region          12..>555
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          42..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..239
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          240..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..380
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          402..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..516
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..644
                     /gene="LOC107939062"
                     /coded_by="XM_041088055.1:2041..3975"
                     /db_xref="GeneID:107939062"
ORIGIN      
        1 mepsfhtlvp kfqlkfisls kcrtsqqlsl elptflyyqn dlrfvdlsqn nfsgtvpswl
       61 lenntkledl ilkgnsftgp ltllstpnsn vssidmfdnk iqgqlptnic stfphleqlf
      121 lsknafqgni ppclsamknl smldlsnnql agkvpqelvr ksslfllrls nnnlkgnvvp
      181 vilnanglqk lyldgnhfsg emtnfdvstf qfptsltdid lsnnrlhgkl prwignmsll
      241 erldlsnngf egsipvefcn lnnfkffdls ennlsgsips cfnppnlehv hlhnnrlggp
      301 lslafnksts lvtldlrgnn ftggipkwig alsslsvlll kanhlrgris vqlctlysls
      361 iidlsqnrfs gpipsclgnl tlpmnkdktm tpdlmsptfs eldelkllkt gilfehmmhs
      421 ysymkesvef ttksgsysyg gdileymsgi dlscneltgq iplelgnlhe ihslnlshnk
      481 lvgvipssfs klkqiesldl synnlsgeip nqlvelnslg vfsvahnnls gsipeqnqfv
      541 tfiessyegn pflcgpmlhi scsktgstst isdderedsf ldtyvfcvsf lasyvvmllt
      601 ivvilyinph wrgvwfsfvg kcisscryst vgnllgyyif rrcv
//
LOCUS       XP_040943990             276 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943990
VERSION     XP_040943990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088056.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="receptor-like protein 56 isoform X2"
                     /calculated_mol_wt=31854
     Region          34..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <98..>258
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          108..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..276
                     /gene="LOC107939062"
                     /coded_by="XM_041088056.1:105..935"
                     /db_xref="GeneID:107939062"
ORIGIN      
        1 mmdskwlwfm rmaamsvlll legcrwctid acveherval lqlkpffnhy nefdswdelk
       61 gsdcckwkgi ecntttgrli glsldsmrsg yldywylnas lflpfkelkr lyltgsgiag
      121 cvenegfekl sstfrnlqfl dlsqnhlnds filslsqfss lqylnlaynl legkwphiqg
      181 lnnlkilktl dlrwnqmerf qsfkdddkkl elthleelnl eanlfnnsvf vtldklsnlk
      241 slsigfnqln glidmkdlda yllviyvdma ikacgl
//
LOCUS       XP_040943991             224 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943991
VERSION     XP_040943991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088057.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="receptor like protein 21 isoform X3"
                     /calculated_mol_wt=25966
     Region          34..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <102..>207
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          108..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          137..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          161..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..224
                     /gene="LOC107939062"
                     /coded_by="XM_041088057.1:102..776"
                     /db_xref="GeneID:107939062"
ORIGIN      
        1 mmdskwlwfm rmaamsvlll legcrwctid acveherval lqlkpffnhy nefdswdelk
       61 gsdcckwkgi ecntttgrli glsldsmrsg yldywylnas lflpfkelkr lyltgsgiag
      121 cvenegfekl sstfrnlqfl dlsqnhlnds filslsqfss lqylnlaynl legkwphiqg
      181 lnnlkilktl dlrwnqmerf qsfkdldayl lviyvdmaik acgl
//
LOCUS       XP_040943992             376 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943992
VERSION     XP_040943992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088058.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..376
                     /product="receptor-like protein 56 isoform X1"
                     /calculated_mol_wt=42143
     Region          4..>367
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          7..32
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          33..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          56..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          109..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          334..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..376
                     /gene="LOC121214422"
                     /coded_by="XM_041088058.1:1000..2130"
                     /db_xref="GeneID:121214422"
ORIGIN      
        1 mrnlsslktl rlssnqlegr llhiqglsnl inlkkldlse nqieslqfsk dggrklelth
       61 lkelnlnsnl fnnsvfasln kllnlktlsi snqlkgpidt kdldaftslr elnmraneli
      121 dfvihkesnv srnveeiyld ystlntnilq sigvlvslkt lslyacglig plpnqgwcdl
      181 rnlevldvsg nalegmlphc fsnltalrvl disrnhfqip lsfapfanls nlkallsnen
      241 kmvtepsfyt sipkfqfevi slskcitsqq lsrklptfly yqydlryvdl shnnfsgtvp
      301 swllenntkl edlilkgnsf tsplsfssal isnvssidis enkiqgqipt stcstfphls
      361 rlflsknllk vishfv
//
LOCUS       XP_040943993             376 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943993
VERSION     XP_040943993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088059.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..376
                     /product="receptor-like protein 56 isoform X1"
                     /calculated_mol_wt=42143
     Region          4..>367
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          7..32
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          33..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          56..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          109..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          334..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..376
                     /gene="LOC121214422"
                     /coded_by="XM_041088059.1:1149..2279"
                     /db_xref="GeneID:121214422"
ORIGIN      
        1 mrnlsslktl rlssnqlegr llhiqglsnl inlkkldlse nqieslqfsk dggrklelth
       61 lkelnlnsnl fnnsvfasln kllnlktlsi snqlkgpidt kdldaftslr elnmraneli
      121 dfvihkesnv srnveeiyld ystlntnilq sigvlvslkt lslyacglig plpnqgwcdl
      181 rnlevldvsg nalegmlphc fsnltalrvl disrnhfqip lsfapfanls nlkallsnen
      241 kmvtepsfyt sipkfqfevi slskcitsqq lsrklptfly yqydlryvdl shnnfsgtvp
      301 swllenntkl edlilkgnsf tsplsfssal isnvssidis enkiqgqipt stcstfphls
      361 rlflsknllk vishfv
//
LOCUS       XP_040943994             327 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943994
VERSION     XP_040943994.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088060.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..327
                     /product="receptor-like protein 56 isoform X2"
                     /calculated_mol_wt=36806
     Region          7..32
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          33..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..>300
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          109..133
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          134..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          261..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..327
                     /gene="LOC121214422"
                     /coded_by="XM_041088060.1:1000..1983"
                     /db_xref="GeneID:121214422"
ORIGIN      
        1 mrnlsslktl rlssnqlegr llhiqglsnl inlkkldlse nqieslqfsk dggrklelth
       61 lkelnlnsnl fnnsvfasln kllnlktlsi snqlkgpidt kdldaftslr elnmraneli
      121 dfvihkgwcd lrnlevldvs gnalegmlph cfsnltalrv ldisrnhfqi plsfapfanl
      181 snlkallsne nkmvtepsfy tsipkfqfev islskcitsq qlsrklptfl yyqydlryvd
      241 lshnnfsgtv pswllenntk ledlilkgns ftsplsfssa lisnvssidi senkiqgqip
      301 tstcstfphl srlflsknll kvishfv
//
LOCUS       XP_040943995            1480 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor like protein 21 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040943995
VERSION     XP_040943995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088061.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1480
                     /product="receptor like protein 21 isoform X1"
                     /calculated_mol_wt=166233
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          102..512
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          199..222
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          223..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..296
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          297..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..373
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          374..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          398..423
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          424..472
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          473..500
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          501..524
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          525..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..576
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          552..>835
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          577..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..653
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          654..675
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          678..702
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          703..727
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          728..751
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          752..776
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          777..800
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          801..823
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          826..867
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          879..>1388
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          879..903
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          928..952
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          953..976
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          977..1000
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1001..1024
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1025..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1053..1076
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1077..1100
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1101..1123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1124..1147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1196..1217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1236..1302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1303..1326
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1327..1348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1480
                     /gene="LOC107943934"
                     /coded_by="XM_041088061.1:316..4758"
                     /db_xref="GeneID:107943934"
ORIGIN      
        1 mmmmewkwlr firmavmllv legcrwcttd acleherial lhlkpffnyd nqlkswvevk
       61 gsdcckwerv ecntttrrli qlslssskwg nsigyntdnr nlnawylnts mflpfeelks
      121 lylrgnaisg nlenegfgkl sstlsnleil dlsenylnds illslselss lryldlssnk
      181 fegsghqrgf qllsrlnnle tldlsgnslk nnilfhmrnl sslktlrlgg nelkgrldhi
      241 qglnnltnlk yldlssnrie sisnkglnnl tnlkyldlsw nriesisnkg lnnlsnlkyl
      301 dlihnniesi snqgfqwlsr ltkletldly gnylknrill hmrnlsslkt lslggnqlgg
      361 kllhiqelnh lanlkyldls rnkiesisnk glnnltnlky ldlswnries isnkdgtqlr
      421 ltnleelhls dnlfrnntis fpqglsslks ltlsgnnlqg sldtkglsnl tnlkkldlsv
      481 nqiesfqsfk dggrklelth leelyldgnh fntsvfasln klsnlkslsi sgnqlkgsid
      541 mkdleafinl reldmsgnel kdlvihqdgt qlrltnleel dlsgnlfrnn tisfpqglss
      601 lksltlsnnd lqgsldtkgl snltnlkkln lggdqiesfq sfkdggrkle lthleelnla
      661 gnhfntsvfa slkklsnlks lsiwdnglkg sidmkdletf inlreldmkg nelkdlvihq
      721 dsnvlsnlee iylgnstlnt nilqsigvfa slktlslydc gligplpnqg wcdlknlevl
      781 dvsnnalegm lprcfsnlts lrvldvsrnh fqiplsfapf anlsnlkals inenkmvmes
      841 sfytsipkfq levirlpkci asqqlsrkfp tflyyqydlr yvdlshnnls gtvptwllen
      901 ntkledlilk gnsftgplsl ssalisnvss idisenklqg qiptgicstf phlrrlflsk
      961 nafegniplc lsgmkdlsfl dlsnnqlfgk vpeelitkgl ltilrlsnnn lsgnvvpvil
     1021 nakgvrnlyl dgnnfsgemt nvdvstfefp nslseidlsn nklhgklprw ignasflwrl
     1081 amsnnsfegs ipmefcklns lefldlsqnn lsgsipscfn ppyiehvhlh gnrlrgplsl
     1141 afynsssivt ldlrgnnltg sipkwiytls slsvlllkdn hfhgkvpvel cklhslsiid
     1201 lsqnmfsgpi psclgnlslp mqtnkiletg fyvpsieeye ttlnlrmdsy ypdsyleevi
     1261 efttksglfl yegnilsymt gidlscnnlt ghippelgnl seiyslnlsh nkltgvipss
     1321 faklhqiesl dlsynnlsge ipnqlvelns levfsvaynn lsgsipepka qfgtfiensy
     1381 egnpflcgpi lhkscsktds pstistvsed kgedglidty dfcvsflvsy vvvlltifvv
     1441 lyinpywrra wfslvgkcit tcrysnvgnf ltyhifkrcv
//
LOCUS       XP_040943996            1335 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 45 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943996
VERSION     XP_040943996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088062.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1335
                     /product="receptor-like protein 45 isoform X2"
                     /calculated_mol_wt=150576
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          115..>847
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          304..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..356
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          357..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          432..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          509..532
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          533..557
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          583..606
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..631
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          632..655
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          656..678
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..722
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          734..>1243
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          734..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..807
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          808..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..855
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          856..879
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          880..907
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          908..931
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          932..955
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          956..978
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          979..1002
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1051..1072
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1091..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1335
                     /gene="LOC107943934"
                     /coded_by="XM_041088062.1:287..4294"
                     /db_xref="GeneID:107943934"
ORIGIN      
        1 mmmmewkwlr firmavmllv legcrwcttd acleherial lhlkpffnyr nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntdnr nlnawylnts mflpfeelks
      121 lylsgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlsink
      181 fegsghqrgk lsliwcllkg qlmllvfegc rwctidacle heriallhlk pffnsrdelk
      241 swvevkgsdc ckwervecnt ttrrliqlsl ssskwensir yntdnrnlna wylntsmflp
      301 feelkslyls gnaisgnlen egfgklsstl snleildlsf nylndsills lselsslryl
      361 dlsrnkfegs ghqrglnnls nlkyldlswn riesisnkgl nnltnlkyld lswnriesis
      421 nkdgtqlrlt nleeldlsgn lfrnntisfp qglsslkslt lsnndlqgsl dtkglsnltn
      481 lkklnlggdq iesfqsfkdg grklelthle elnlagnhfn tsvfaslkkl snlkslsiwd
      541 nglkgsidmk dletfinlre ldmkgnelkd lvihqdsnvl snleeiylgn stlntnilqs
      601 igvfaslktl slydcgligp lpnqgwcdlk nlevldvsnn alegmlprcf snltslrvld
      661 vsrnhfqipl sfapfanlsn lkalsinenk mvmessfyts ipkfqlevir lpkciasqql
      721 srkfptflyy qydlryvdls hnnlsgtvpt wllenntkle dlilkgnsft gplslssali
      781 snvssidise nklqgqiptg icstfphlrr lflsknafeg niplclsgmk dlsfldlsnn
      841 qlfgkvpeel itkglltilr lsnnnlsgnv vpvilnakgv rnlyldgnnf sgemtnvdvs
      901 tfefpnslse idlsnnklhg klprwignas flwrlamsnn sfegsipmef cklnslefld
      961 lsqnnlsgsi pscfnppyie hvhlhgnrlr gplslafyns ssivtldlrg nnltgsipkw
     1021 iytlsslsvl llkdnhfhgk vpvelcklhs lsiidlsqnm fsgpipsclg nlslpmqtnk
     1081 iletgfyvps ieeyettlnl rmdsyypdsy leeviefttk sglflyegni lsymtgidls
     1141 cnnltghipp elgnlseiys lnlshnkltg vipssfaklh qiesldlsyn nlsgeipnql
     1201 velnslevfs vaynnlsgsi pepkaqfgtf iensyegnpf lcgpilhksc sktdspstis
     1261 tvsedkgedg lidtydfcvs flvsyvvvll tifvvlyinp ywrrawfslv gkcittcrys
     1321 nvgnfltyhi fkrcv
//
LOCUS       XP_040943997            1335 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 45 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040943997
VERSION     XP_040943997.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088063.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1335
                     /product="receptor-like protein 45 isoform X3"
                     /calculated_mol_wt=150481
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          115..>847
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          118..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          304..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..356
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          357..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          432..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..508
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          509..532
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          533..557
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..631
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          632..653
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          656..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..722
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          734..>1243
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          734..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          783..807
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          808..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..855
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          856..879
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          880..907
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          908..931
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          932..955
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          956..978
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          979..1002
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1051..1072
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1091..1157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1158..1181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1182..1203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1335
                     /gene="LOC107943934"
                     /coded_by="XM_041088063.1:288..4295"
                     /db_xref="GeneID:107943934"
ORIGIN      
        1 mmmmewkwlr firmavmllv legcrwcttd acleherial lhlkpffnyr nqlqswvevk
       61 gsdcckwerv ecntttrrli qlslnsskwe dsmgyntdnr nlnawylnts mflpfeelks
      121 lylsgnaisg nlenegfgkl sstlsnleil dlsfnylnds illslselss lryldlsink
      181 fegsghqrgk lsliwcllkg qlmllvfegc rwctidacle heriallhlk pffnsrdelk
      241 swvevkgsdc ckwervecnt ttrrliqlsl ssskwensir yntdnrnlna wylntsmflp
      301 feelkslyls gnaisgnlen egfgklsstl snleildlsf nylndsills lselsslryl
      361 dlsrnkfegs ghqrglnnls nlkyldlswn riesisnkgl nnlsnlkyld lsfnniesis
      421 nqdgtqlrlt nleeldlsgn lfrnntisfp qglsslkslt lsnndlqgsl dtkglsnltn
      481 lkklnlggdq iesfqsfkdg grklelthle elnlagnhfn tsvfaslkkl snlkslsiwd
      541 nglkgsidmk dletfinlre ldmkgnelkd lvihqdsnvl snleeiylgn stlntnilqs
      601 igvfaslktl slydcgligp lpnqgwcdlk nlevldvsnn alegmlprcf snltslrvld
      661 vsrnhfqipl sfapfanlsn lkalsinenk mvmessfyts ipkfqlevir lpkciasqql
      721 srkfptflyy qydlryvdls hnnlsgtvpt wllenntkle dlilkgnsft gplslssali
      781 snvssidise nklqgqiptg icstfphlrr lflsknafeg niplclsgmk dlsfldlsnn
      841 qlfgkvpeel itkglltilr lsnnnlsgnv vpvilnakgv rnlyldgnnf sgemtnvdvs
      901 tfefpnslse idlsnnklhg klprwignas flwrlamsnn sfegsipmef cklnslefld
      961 lsqnnlsgsi pscfnppyie hvhlhgnrlr gplslafyns ssivtldlrg nnltgsipkw
     1021 iytlsslsvl llkdnhfhgk vpvelcklhs lsiidlsqnm fsgpipsclg nlslpmqtnk
     1081 iletgfyvps ieeyettlnl rmdsyypdsy leeviefttk sglflyegni lsymtgidls
     1141 cnnltghipp elgnlseiys lnlshnkltg vipssfaklh qiesldlsyn nlsgeipnql
     1201 velnslevfs vaynnlsgsi pepkaqfgtf iensyegnpf lcgpilhksc sktdspstis
     1261 tvsedkgedg lidtydfcvs flvsyvvvll tifvvlyinp ywrrawfslv gkcittcrys
     1321 nvgnfltyhi fkrcv
//
LOCUS       XP_016727829            1257 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016727829
VERSION     XP_016727829.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016872340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016727829.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1257
                     /product="receptor-like protein 13 isoform X1"
                     /calculated_mol_wt=141561
     Region          35..75
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <120..275
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          120..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          149..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..>816
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          225..250
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          251..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          302..327
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          328..353
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          354..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          378..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          403..430
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          431..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          455..479
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          480..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          529..553
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          554..577
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          578..602
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          603..655
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          637..>1222
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          656..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..706
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          709..729
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          730..753
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          754..777
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          778..801
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          802..829
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          830..853
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          854..877
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          878..900
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          901..924
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          949..972
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          973..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          996..1057
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1058..1081
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1082..1105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1106..1127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1257
                     /gene="LOC107939051"
                     /coded_by="XM_016872340.2:59..3832"
                     /db_xref="GeneID:107939051"
ORIGIN      
        1 mmmmmewkwy lwfirmavml lvlercswct tdacleheri allhlkpffn yrnqlqswve
       61 vkgsdcckwe rvecntttrr liqlslnstk wednmeyvmd nrnlnawyln asmflpfeel
      121 krlylsgnvi ggslenegfg klsstlsnle ilnlsenyln dsillslsel sslryldlsi
      181 nkfegsshlr gfqslsrlnn letldlsgns lkntilfhmr nisslktlrl sanqlkgrld
      241 hihglnnltn lkyldlswnn iesisnqgfq llsrlnnlet ldlsrnsfkn silfhmrnls
      301 slktlrlsgn qlkgrldhiq glnnltnlky ldlswndies isnkdgtqwr ltnleeldls
      361 gnlfrnntis fpqglsslks ltlynnhlqg sldttglsnl tnlkkldlsg nqiesfqtfk
      421 dggrklelth leelyldgnh fntsvfasln klsnlkslsi senqlkgsid mkdleafikl
      481 reldmsynel rdfvihqeln vssnveelyl dhstlntnil qgigvlsslk tlslydcgli
      541 gplpnhgwcd lrnlevldvr wnalegmlph cfsnltalre ldisgnhfqi plsfapfanl
      601 snlkallsne nkmvtepsfy tsipkfqlev islpkcitsq qlscklptfl yyqydlryvd
      661 lshnnfsgtv ptwllenntk ledlilkgns ftgpltlpsa pnskvslidi sqnklqgqip
      721 tnvcshfphl shlflsknaf egdippclsg mkdlsildls dnqlsgrvpe elitknslti
      781 lrlsnnnlsg hvlpvilnan glsklyldgn nfsgemanvd vsisefptsl reinlgnnkf
      841 ygnlprwmgn vsflerlals qngfegsipm efcnlnrlef ldlsennlfg sipscfntln
      901 ikhvhlhgsr lsgplpiafy nisslvtldl rgnnltgsip kwigtlssls vlllkdnhfh
      961 gevpvqlckl dslniidlsq nmfsgiipsc lgnltlstet nkiltdskis prltgdglvk
     1021 tlgalgnyyy pegyleevie fttksgflsy egniltymtg idlscnnltg hippelgnls
     1081 eiyslnlshn kltgvipssf aklhqiesld lsynnlsgei pnqlvelnsl evfsvaynnl
     1141 sgsipepkaq fgtfiensye gnlflcgail hkscsktdsp stistlseyk gedgligtyd
     1201 fcvsflvsyv vvlltifvvl yinqywrrvw fsligkcitt crysnvgnfl tyhifkq
//
LOCUS       XP_040943998            1251 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040943998
VERSION     XP_040943998.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088064.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1251
                     /product="receptor-like protein 1 isoform X2"
                     /calculated_mol_wt=140614
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <114..269
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          114..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..>810
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          219..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..271
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          272..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          322..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          397..424
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          425..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..473
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          474..498
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          523..547
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          548..571
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          572..596
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          597..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          631..>1216
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          650..674
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          675..700
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          703..723
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          724..747
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          748..771
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          772..795
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          796..823
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          824..847
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          848..871
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          872..894
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          895..918
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          943..966
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          967..988
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          990..1051
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1052..1075
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1076..1099
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1100..1121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1251
                     /gene="LOC107939051"
                     /coded_by="XM_041088064.1:345..4100"
                     /db_xref="GeneID:107939051"
ORIGIN      
        1 mmmmewkwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttsrli qlslnssrwf yttdnrnlna wylntsmflp feelkslyls
      121 gnaisgnlen egfgklsstl snleilnlse nylndsills lselsslryl dlsinkfegs
      181 shlrgfqsls rlnnletldl sgnslkntil fhmrnisslk tlrlsanqlk grldhihgln
      241 nltnlkyldl swnniesisn qgfqllsrln nletldlsrn sfknsilfhm rnlsslktlr
      301 lsgnqlkgrl dhiqglnnlt nlkyldlswn diesisnkdg tqwrltnlee ldlsgnlfrn
      361 ntisfpqgls slksltlynn hlqgsldttg lsnltnlkkl dlsgnqiesf qtfkdggrkl
      421 elthleelyl dgnhfntsvf aslnklsnlk slsisenqlk gsidmkdlea fiklreldms
      481 ynelrdfvih qelnvssnve elyldhstln tnilqgigvl sslktlslyd cgligplpnh
      541 gwcdlrnlev ldvrwnaleg mlphcfsnlt alreldisgn hfqiplsfap fanlsnlkal
      601 lsnenkmvte psfytsipkf qlevislpkc itsqqlsckl ptflyyqydl ryvdlshnnf
      661 sgtvptwlle nntkledlil kgnsftgplt lpsapnskvs lidisqnklq gqiptnvcsh
      721 fphlshlfls knafegdipp clsgmkdlsi ldlsdnqlsg rvpeelitkn sltilrlsnn
      781 nlsghvlpvi lnanglskly ldgnnfsgem anvdvsisef ptslreinlg nnkfygnlpr
      841 wmgnvsfler lalsqngfeg sipmefcnln rlefldlsen nlfgsipscf ntlnikhvhl
      901 hgsrlsgplp iafynisslv tldlrgnnlt gsipkwigtl sslsvlllkd nhfhgevpvq
      961 lckldslnii dlsqnmfsgi ipsclgnltl stetnkiltd skisprltgd glvktlgalg
     1021 nyyypegyle eviefttksg flsyegnilt ymtgidlscn nltghippel gnlseiysln
     1081 lshnkltgvi pssfaklhqi esldlsynnl sgeipnqlve lnslevfsva ynnlsgsipe
     1141 pkaqfgtfie nsyegnlflc gailhkscsk tdspstistl seykgedgli gtydfcvsfl
     1201 vsyvvvllti fvvlyinqyw rrvwfsligk cittcrysnv gnfltyhifk q
//
LOCUS       XP_040943999             417 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 [Gossypium hirsutum].
ACCESSION   XP_040943999
VERSION     XP_040943999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088065.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..417
                     /product="receptor-like protein 13"
                     /calculated_mol_wt=47439
     Region          33..73
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          111..>407
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          114..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          271..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..396
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..417
                     /gene="LOC121203526"
                     /coded_by="XM_041088065.1:279..1532"
                     /db_xref="GeneID:121203526"
ORIGIN      
        1 mmmmewkwlr firmavmllv legcrwcttd acleherial lhlkpffnyq nqlqswvevk
       61 gsdcckwerv ecntttsrli qlslnssrwf yttdnrnlna wylntsmflp feelkslyls
      121 gnaisgnlen egfgklsstl snleildlsy nylndsills lselsslryl dlssnkfegs
      181 ghqrgfqlls rlnnletldl sgnslknnil fhmrnlsslk tlrlggnelk grldhiqgln
      241 nltnlkyldl swnriesisn kdgtqlrltn leeldlsgnl frnntisfpq glsslksltl
      301 snndlqgsld tkglsnltnl kklnlggdqi esfqsfkdgg rklelthlee lnlagnhfnt
      361 svfaslkkls nlkslsiwdn glkgsidmkd letfinlrel dmkgnelkdl vihqgii
//
LOCUS       XP_040944000             412 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 13 [Gossypium hirsutum].
ACCESSION   XP_040944000
VERSION     XP_040944000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088066.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..412
                     /product="receptor-like protein 13"
                     /calculated_mol_wt=46120
     Region          <6..49
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          9..32
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          31..>299
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          33..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          56..79
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          80..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          235..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          259..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..412
                     /gene="LOC121214424"
                     /coded_by="XM_041088066.1:1..1239"
                     /db_xref="GeneID:121214424"
ORIGIN      
        1 mcldfvsflw rldlsnngfe gsipmefckl nrlefldlsq nnlsgsipsc fnppyiehvh
       61 lhgnrlrgpl slafynsssi vtldlrgnnl tgsipkwiyt lsslsvlllk ynhfhgkvpv
      121 elcklhslsi idlsqnmfsg pipsclgnls lpmqtnkile iefygpsiee hettlnfgmd
      181 syyptsylee viefttksgf ysykgdilsy mtgidlscnn ltghippelg nlseihslnl
      241 shnkltgvip ssfaklhqie sldlsynnls geipnqlvel nslevfsvay nnlsgsipep
      301 kaqfgtfien syegnpflcg pilhkscskt dspstistvs edkgedglid tydfcvsflv
      361 syvvvlltif vvlyinlywr rawfslvgkc ittcrysnvg nfltyhifkr cv
//
LOCUS       XP_040944001             283 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 [Gossypium hirsutum].
ACCESSION   XP_040944001
VERSION     XP_040944001.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088067.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..283
                     /product="receptor-like protein 56"
                     /calculated_mol_wt=31739
     Region          82..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <85..>191
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..283
                     /gene="LOC121214426"
                     /coded_by="XM_041088067.1:238..1089"
                     /db_xref="GeneID:121214426"
ORIGIN      
        1 mfygfipscl gnltlktkdq ktltsyfvea sdvvedilpy qketrwrgdg lqeypdtyme
       61 ewvqfttksr sysygglile nmtgidlscn kltgqippel gnlsqihsln lsynnltgvi
      121 pssfsnlkqi esldlsynsl sgeipnqlve lnslevfnva hnnlsgsipe pkaqfgtfie
      181 ssyegnpflc gailhkscsr inspstisti sddkgedglf dtydfcvsff isyvvvllti
      241 favlyknpyw rrswfsfvgk cittcrfsig gsclayyifk rcv
//
LOCUS       XP_040944002             283 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 56 [Gossypium hirsutum].
ACCESSION   XP_040944002
VERSION     XP_040944002.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088068.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..283
                     /product="receptor-like protein 56"
                     /calculated_mol_wt=31738
     Region          82..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <85..>191
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          106..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..283
                     /gene="LOC107923481"
                     /coded_by="XM_041088068.1:34..885"
                     /db_xref="GeneID:107923481"
ORIGIN      
        1 mfygfipscl gnltlktkdq ktltsyfvea sdvvedilpy qketrwrgdg lqeypdtyme
       61 ewvqfttksr sysygglile nmtgidlscn kltgqippel gnlsqihsln lsynnltgvi
      121 pssfsnlkqi esldlsynsl sgeipnqlve lnslevfnva hnnlsgsipe pkaqfgtfie
      181 ssyegnpflc gailhkscsr inspstisti sddkgedglf dtydfcanff isyvvvllti
      241 favlyknpyw rrswfsfvgk cittcrfsig gsclayyifk rcv
//
LOCUS       XP_016710772             202 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016710772
VERSION     XP_016710772.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016855283.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21874
     CDS             1..202
                     /gene="LOC107924714"
                     /coded_by="XM_016855283.2:750..1358"
                     /db_xref="GeneID:107924714"
ORIGIN      
        1 misqvsllyp vkilvgpaqe qelesyssss rlgnpsaskp vnqgslailg lnltllpftk
       61 msfftdkkev qrsatalgfv ahavsliasy lqvplryplr lggsrsyind hassidpass
      121 dlsldttlsa nvklaefplf legqdttraa yavfllnkvg ktvhvcssaf aahfmslivd
      181 nlasiiinim velfgrywiy ni
//
LOCUS       XP_016720680             215 aa            linear   PLN 06-AUG-2024
DEFINITION  ER lumen protein-retaining receptor isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016720680
VERSION     XP_016720680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..215
                     /product="ER lumen protein-retaining receptor isoform X1"
                     /calculated_mol_wt=25637
     Region          28..171
                     /region_name="ER_lumen_recept"
                     /note="ER lumen protein retaining receptor; pfam00810"
                     /db_xref="CDD:459945"
     CDS             1..215
                     /gene="LOC107933044"
                     /coded_by="XM_016865191.2:213..860"
                     /db_xref="GeneID:107933044"
ORIGIN      
        1 mnifrlagdm thlfsvlvll lkihtiksca gislktqely aivfatryld iftnhispyn
       61 timkliflgs sfsivwymry hkivrrsydk dqdtfrhyil ilpclilall inekftfkev
      121 mwtfslylea vailpqlvll qrtrnidnlt gqyvfllgay ralyivnwiy ryftedhfvh
      181 witwicglvq tllyadffyy yfqswknnmk lqlpa
//
LOCUS       XP_040944003             195 aa            linear   PLN 06-AUG-2024
DEFINITION  ER lumen protein-retaining receptor isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944003
VERSION     XP_040944003.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088069.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="ER lumen protein-retaining receptor isoform X2"
                     /calculated_mol_wt=23555
     Region          11..151
                     /region_name="ER_lumen_recept"
                     /note="ER lumen protein retaining receptor; pfam00810"
                     /db_xref="CDD:459945"
     CDS             1..195
                     /gene="LOC107933044"
                     /coded_by="XM_041088069.1:79..666"
                     /db_xref="GeneID:107933044"
ORIGIN      
        1 mrvlnykhsr gislktqely aivfatryld iftnhispyn timkliflgs sfsivwymry
       61 hkivrrsydk dqdtfrhyil ilpclilall inekftfkev mwtfslylea vailpqlvll
      121 qrtrnidnlt gqyvfllgay ralyivnwiy ryftedhfvh witwicglvq tllyadffyy
      181 yfqswknnmk lqlpa
//
LOCUS       XP_016720716             198 aa            linear   PLN 06-AUG-2024
DEFINITION  PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Gossypium hirsutum].
ACCESSION   XP_016720716
VERSION     XP_016720716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..198
                     /product="PLASMODESMATA CALLOSE-BINDING PROTEIN 3"
                     /calculated_mol_wt=20815
     Region          27..111
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..198
                     /gene="LOC107933078"
                     /coded_by="XM_016865227.2:96..692"
                     /db_xref="GeneID:107933078"
ORIGIN      
        1 maipvlklvl lflpllinvf sfvqgqtwcv arsdassqal qnaldyacas gadctpiqsn
       61 glcflpntiq ahasyaynsy yqrrakapgs cdfagtatva ktdpsygscm ypspqstsgg
      121 tampktgswn npnvpttttt pingggggpg lnypgfsppf lsrasfdstl ntssmsilll
      181 lvlsfilhpi wnflnlda
//
LOCUS       XP_016720726             512 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016720726
VERSION     XP_016720726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..512
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58208
     Region          77..502
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(145,149,156,201,313..314,317..318,321..322,325,375,
                     384,386,409,448..450,454..458,461..462)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(223..224,313,316..317,321,382..385)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..512
                     /gene="LOC107933087"
                     /coded_by="XM_016865237.2:116..1654"
                     /db_xref="GeneID:107933087"
ORIGIN      
        1 melvilvpcs lllialikfl ydylwvplsi qhmlnsqgik gppyrfihgn nkeiikmrke
       61 amskpkalth difaktqphm yswikkygkn fvywngirae vvisepelvk evlknsenvf
      121 pkakpsfyvs kllgnglati dgekwvkhrk ltnyafhges lknmtpaiia svetmlkrwk
      181 gkegkeievy qefrlltsev isrtafgsny legekifaml nklsiimgrn lfntkiplis
      241 klwkpadlle seelakeikd cvikivrkre dkavngevds fdnnflglli nayhdsdenn
      301 rlsledlvde cktfywtghd tvnallawvl lllaihgdwq ekarrevidi fgnqnphpes
      361 iaklktmtmi iyetlrlyga tnglprkvar evqvgklvmp anidlliara alhhdpqlwg
      421 ddvhlfkper faegiakatn ynaaaffpfg lgprfcvgmt fatietkial smilqrytis
      481 lspayvhspi piltlhpehg iqvileslhn da
//
LOCUS       XP_016720724             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016720724
VERSION     XP_016720724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865235.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58902
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107933085"
                     /coded_by="XM_016865235.2:167..1717"
                     /db_xref="GeneID:107933085"
ORIGIN      
        1 msaltelvil vpfcfflval ikflydylwv plriqrllns qgikgpaykf ihgnnhevtk
       61 mkkealskhl gltddifpkv qphiytwinr ygrnylywng irpelvisep elvkevlkns
      121 entfpkkkps iffskllgng lvllegekwv khrklanhvf hgerlknmtp aviasvetml
      181 ekwkgqegke ievfqefrll tsevisrtaf gsnylegeki famlkelsii msrnnfktsi
      241 plinklwkgv dmlkseelak giqdcvmkiv kkredkfvng eadsfgndfl gllvnayhds
      301 dennrlsmed lvdecktfyf agqetvnsll awivlllath gdwqdkarre vidifgnrnp
      361 dsegisklkt itmiiyetlr lygpsnglqr rvtrkvqlgk lvlpanidil vqnialhhdp
      421 hqwgddvhlf kperfeegia katnynvaaf fpfglgprsc vgmsfaitet kvalsmilqr
      481 ytitlspayv hspmtilair pqhgiqvile slhnna
//
LOCUS       XP_016720725             512 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016720725
VERSION     XP_016720725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..512
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=57972
     Region          77..502
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(145,149,156,201,313..314,317..318,321..322,325,375,
                     384,386,409,448..450,454..458,461..462)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(223..224,313,316..317,321,382..385)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..512
                     /gene="LOC107933086"
                     /coded_by="XM_016865236.2:71..1609"
                     /db_xref="GeneID:107933086"
ORIGIN      
        1 melvilvpcs lflialikfl ydylwvplsl qhmlnsqgik gppyrfihgn nkeiikmrke
       61 amnkpkalth dmfpklqphm hswikeygkn fvywsgvraq lviseaelvk evmknslnvf
      121 pkakpsvyas nllgnglvmi egekwvkhrk ltnhvfhges lknmtpavia svetmlekwk
      181 gkegkeievy qefrlltsev isrtafgssy segekifaml nklsiimsrn ffnteiplis
      241 klwkpadlle serlaneiqd cvmkivkkre drvvngeads fgndflgllv nayhdlddkn
      301 rlsmedlvae cktfyvagqe tvngllawiv lllaihkdwq ekarreviev fgnqnpdsdg
      361 isklkivtmi iyetlrlygp tnglprrvar evqvgklvlp aninlliaka alhhdpqiwg
      421 ddvhlfkper fadgiaeatn ynaaaffpfg lgprfcvgmt fattetkial smilqrysft
      481 lspayvhspv piitlqpehg ihvileslhn ga
//
LOCUS       XP_016720727             408 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016720727
VERSION     XP_016720727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..408
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=46989
     Region          81..>372
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     CDS             1..408
                     /gene="LOC107933088"
                     /coded_by="XM_016865238.2:77..1303"
                     /db_xref="GeneID:107933088"
ORIGIN      
        1 msglmelvil vpccfflval ikflydylwv plriqhlmns qgikgppykf ihgnneeatk
       61 mreealskpm alrhdifprv qphiytwinr ygrnyiywng iravlvisep elvkevlknn
      121 entfpkkkps iyfsnllgng lvliegekwl krrklanhaf hgeslknmtp aviasvetml
      181 ekwkgqegke ievfqefrll tsevisrtaf gsnylegeki lsmlkelsvi msrnnfktri
      241 plinklwkpa dmlrseelak giqdcvmkiv kkredkfkkg eadsfgndfl gllvnsyhsk
      301 dnnslsmedl vdecktfyfa gqgtinslla wivlllathg dwqekarrev idifgnrnpd
      361 segisklkik ammqtsscsr pafkrdqkql nyfvyfcsfc naiqakcn
//
LOCUS       XP_016742783             525 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016742783
VERSION     XP_016742783.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016742783.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..525
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=59971
     Region          90..515
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(158,162,169,214,326..327,330..331,334..335,338,388,
                     397,399,422,461..463,467..471,474..475)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410675"
     Site            order(236..237,326,329..330,334,395..398)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410675"
     CDS             1..525
                     /gene="LOC107952054"
                     /coded_by="XM_016887294.2:35..1612"
                     /db_xref="GeneID:107952054"
ORIGIN      
        1 mdsvvreekk sdlmelvilv pccfflvall kflydylwvp lriqrmmnsq gikgppyrfi
       61 hgnskevarm eqealskrma ltddifpkvl phfytwinry grnfvywnga rpelvisepe
      121 likevlqtse kkiqekslsd igkeflgngl lfiagekwak hrklanhafh geslknmtpa
      181 iiasvetmle kwkgqegrei evlkefrllt sevisrtafg ssylegekif amlqkltiim
      241 srnlfktrip lisklwkssd lleseklske ikdrvmkivk kredeavnge vnsfgndflg
      301 llvnayhdsd eknrfsledl laecktfyfs gqetvnslls wivlhlaihg dwqekarrev
      361 idifgnqnph legvaklkit tmiinetlrl ygpsnglara vtrevqlgkl llpanisilp
      421 lyigihhdph fwgddvhhfk perfaegiak atnytaaafl pfglgprscv gmtfatietk
      481 ivlsmilqry titlspayih spisilsirp qheiqvilep lhhna
//
LOCUS       XP_016743328             265 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016743328
VERSION     XP_016743328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887839.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..265
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=29821
     Region          <2..255
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(66..67,70..71,74..75,78,128,137,139,162,201..203,
                     207..211,214..215)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(66,69..70,74,135..138)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..265
                     /gene="LOC107952654"
                     /coded_by="XM_016887839.2:1985..2782"
                     /db_xref="GeneID:107952654"
ORIGIN      
        1 mlkseelakg iqdcvmkivk qredkfvnge adsfgndflg llvnayhdsd ennrlsmedl
       61 vdecktfyfa gqetvnslla wivlllpthg dwqdkarrev idifgnrnpd skgisklkti
      121 tmiiyetlrl ygpsnglqrr vtrkvqlgkl vlpanidilv qnialhheph qwgddlhlfk
      181 perfeegiak atnynaaaff tfglgprsci gmsfaitetk vaismilqry titlsptyvh
      241 spmpilairp qhgiqviles lhnna
//
LOCUS       XP_016698161             525 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016698161
VERSION     XP_016698161.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842672.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..525
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=59992
     Region          90..515
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(158,162,169,214,326..327,330..331,334..335,338,388,
                     397,399,422,461..463,467..471,474..475)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(236..237,326,329..330,334,395..398)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..525
                     /gene="LOC107913978"
                     /coded_by="XM_016842672.2:16..1593"
                     /db_xref="GeneID:107913978"
ORIGIN      
        1 mdsvvreekk sdlmelvilv pccfflvali kflydylwvp lriqhmmnsq gikgppyrfi
       61 hgnskevarm eqealskrva ltddifpkvl phfyawinry grnfvywnga rpelvisepe
      121 likevlqtse kkiqekslsd igreflgngl lfiagekwak hrklanhafh geslknmtpa
      181 iiasvetmle kwkgqegrei evlkefrllt sevisrtafg ssylegekif amlqkltiim
      241 srnlfktrip lisklwksad lleseklske ikdrvmkivk kredeavnge vnsfgndflg
      301 llvnayhdsd eknrfsledl laecktfyfs gqetvnslls wivlhlaihg dwqekarrev
      361 idifgnqnph legvaklkit tmiinetlrl ygpsnglara vtrdvqlekl llpaninilp
      421 lyigvhrdph fwgddvhhfk perfaegiak atnytaaafl pfglgprscv gmtfatietk
      481 ivlsmilqry titlspayih spisilsirp qheiqvilep lhhna
//
LOCUS       XP_040944005             149 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22-like [Gossypium hirsutum].
ACCESSION   XP_040944005
VERSION     XP_040944005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088071.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..149
                     /product="cytochrome P450 CYP749A22-like"
                     /calculated_mol_wt=16664
     Region          <9..139
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     CDS             1..149
                     /gene="LOC107915958"
                     /coded_by="XM_041088071.1:210..659"
                     /db_xref="GeneID:107915958"
ORIGIN      
        1 mqtdhydyye tlrlygpsng lprgvarevq lgilvlpsni dllvqnialh hdpylwgddv
       61 hlfkperfak giarstnyna aaffpfglgp rscvgmsfat tetkivlsmi lqrytftlsp
      121 ayvhspmpiv dlqpqhgiqv ileplhnnd
//
LOCUS       XP_016697949             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016697949
VERSION     XP_016697949.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842460.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016697949.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58434
     Region          82..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107913813"
                     /coded_by="XM_016842460.2:265..1815"
                     /db_xref="GeneID:107913813"
ORIGIN      
        1 mnalmkllil apccfffial ikllydylwi plriqhmlns egikgppyrf ihgnnkevtk
       61 mkqkalsksv gltddlfpkv hphiytwtnr ygknfvhwng arpelvisep elvkevlkns
      121 eqifqkkkls digrkflgng lifieggkwa khrklanhtf hgeslknmtp aiiasvetml
      181 ekwkgqegke ievyqefrll tsevisrtaf gsnymegeki failrkltvi msrnlsktri
      241 plisklwksa dlleseklsk eikdrlmkiv kkredkavng evnsfgsdfl glllnayhds
      301 daknrisled vvaecktfyf agqetvnsll awivlhlaih gdwqekarre vvdifgnqnp
      361 hlegiaklki mtmiinetlr mygppnglar tvarevqlgk lvlpakldil plniglhrdp
      421 qlwgddvhhf kperfaegia katnytaaaf ipfglgprsc vgmtfasiet kvalsmilqr
      481 ytitlspayv hspipiltll pqhgiqvile pihsna
//
LOCUS       XP_016698759             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016698759
VERSION     XP_016698759.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016843270.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016698759.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22 isoform X1"
                     /calculated_mol_wt=58719
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107914371"
                     /coded_by="XM_016843270.2:4..1554"
                     /db_xref="GeneID:107914371"
ORIGIN      
        1 mnalmmllil apccfffial ikllydylwi plriqhmlns qgikgppyrf ihgnnkevtk
       61 mkqkalsksv gltddlfpkv qphiytwtnr ygknfvywng araelvisep elvkevlkns
      121 eqifqkkkls digrkflgng lifiegekwa khrklanhtf hgeslknmtp aiiasvetml
      181 ekwkgqegke ievyqefrll tsevisrtaf gsnymegeki failrkltvi msrnlsktri
      241 plisklwksa dlleaeklsk eikdrvmkiv kkredkvvne evnsfgsdfl glllnayhds
      301 daknrlsled vvaecktfyf agqetvnsll awivlhlaih gdwqekarre vidifgnqnp
      361 hlegiaklki mtmiinetlr lygpsnglar avtrevqlgk lllpanidil plniglhrdp
      421 hfwgddvhhf kperfaegia katnyttaaf fpfglgprsc vgmtfatiet kvalsmilqr
      481 ytitlspayv hspipiltlr pqhgiqvile pihsna
//
LOCUS       XP_040944006             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944006
VERSION     XP_040944006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088072.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22 isoform X2"
                     /calculated_mol_wt=58744
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107914371"
                     /coded_by="XM_041088072.1:8..1558"
                     /db_xref="GeneID:107914371"
ORIGIN      
        1 mnalmmllil apccfffial ikllydylwi plriqhmlns qgikgppyrf ihgnnkevtk
       61 mkqkalsksv gltddlfpkv qphiytwtnr ygknfvywng araelvisep elvkevlkns
      121 eqifqkkkls digrkflgng lifiegekwa khrklanhtf hgeslknmtp aiiasvetml
      181 ekwkgqegke ievyqefrll tsevisrtaf gsnymegeki failrkltvi msrnlsktri
      241 plisklwksa dlleseklsk emkdrvmkiv kkredkvvng evnsfrsdfl glllnayyds
      301 daknrlsled vvaecktlyf agqetvnsll awivlhsail gdwqekarre lvdifgnqnp
      361 hlegiaklki mtmiinealr lygptnvlqr tgtreiqlgk lilpanidil plsiglhrdp
      421 hfwgndvhhf kperfaegia katnytaaaf fpfglgprsc vgmtfamiet kialsmilqr
      481 ytitlspayv hspvliltlq pqngiqvile pihsna
//
LOCUS       XP_016698760             374 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016698760
VERSION     XP_016698760.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016843271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016698760.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..374
                     /product="cytochrome P450 CYP749A22 isoform X3"
                     /calculated_mol_wt=41885
     Region          <26..364
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(63,175..176,179..180,183..184,187,237,246,248,271,
                     310..312,316..320,323..324)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(85..86,175,178..179,183,244..247)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..374
                     /gene="LOC107914371"
                     /coded_by="XM_016843271.2:450..1574"
                     /db_xref="GeneID:107914371"
ORIGIN      
        1 mgkaskagqs hfpwgkpkgg lfgqnmtpai iasvetmlek wkgqegkeie vyqefrllts
       61 evisrtafgs nymegekifa ilrkltvims rnlsktripl isklwksadl leaeklskei
      121 kdrvmkivkk redkvvneev nsfgsdflgl llnayhdsda knrlsledvv aecktfyfag
      181 qetvnsllaw ivlhlaihgd wqekarrevi difgnqnphl egiaklkimt miinetlrly
      241 gpsnglarav trevqlgkll lpanidilpl niglhrdphf wgddvhhfkp erfaegiaka
      301 tnyttaaffp fglgprscvg mtfatietkv alsmilqryt itlspayvhs pipiltlrpq
      361 hgiqvilepi hsna
//
LOCUS       XP_016698082             530 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016698082
VERSION     XP_016698082.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842593.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016698082.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=60354
     Region          96..521
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(164,168,175,220,332..333,336..337,340..341,344,394,
                     403,405,428,467..469,473..477,480..481)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(242..243,332,335..336,340,401..404)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..530
                     /gene="LOC107913927"
                     /coded_by="XM_016842593.2:20..1612"
                     /db_xref="GeneID:107913927"
ORIGIN      
        1 mkyldsvvre enksglmelv ilvpwcffli altkflyhyl wvplriqhmm nsqgikgppy
       61 rfihgnnkev tkmrkeekgs ikqscgltdd lfprlqphiy swintygknf vywngvraev
      121 visepelike vmknsenifq krkltdvgak llgnglvfie gekwakhrkl anhafhgesl
      181 knmtpaiivs veimlerwkg qegkeievyn efrlltsevi srtafgsnyl egekifamln
      241 kliilvsqni sktkipfink lwksaemles eklekgiqdy vmemikkred kvvsgeadsf
      301 gndflgllvn ayndlddknr vsledlvgec ktiyfagqet vnsllawivl hlaihgdwqe
      361 karrevidif gnqnphlegi aklkimtmii netlrlygps nglprtvare vqlgklvlpa
      421 nidvlslnig lhrdphlwgd dvhhfkperf aegiakatny taaaffpfgl gprscvgmtl
      481 atietkials milqrytiti spayvhspip iltirprhgi qiileplhsc
//
LOCUS       XP_040944007             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_040944007
VERSION     XP_040944007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088073.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58677
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC121214435"
                     /coded_by="XM_041088073.1:22..1572"
                     /db_xref="GeneID:121214435"
ORIGIN      
        1 mnalmkllil apccfffial ikllydylwi plriqhmlns qgikgppyrf ihgnnkevtk
       61 mkqnalsksv gltddlfpkv lphiytwtnr ygknfvywng araelvisep elikevlkns
      121 eqifqkkkls digrkflgng lifiegqkwa khrklanhtf hgeslknmtp aiiasvetml
      181 ekwkgqegke ievyqefkll tsevisrtaf gsnymegeki failsklavi msrnvsttri
      241 plisklwksa dlleseklsk eikdrvmkiv kkredkvvng evnsfrsdfl elllnayhds
      301 daknrlsled vvaecktfyf agqdtvnsll awivlhsail gdwqekarre lvdifgnqnp
      361 hlegiaklki mtmiinetlr lygptsvlqr tvtreiqlgk lllpanidil plniglhrdp
      421 hfwgndvhhf kperfaegia katnytaaaf fpfglgprsc vgmtfamiet kialsmilqr
      481 ytitlspayv hspvliltlq pqngiqvile pihsna
//
LOCUS       XP_040944008             499 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944008
VERSION     XP_040944008.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088074.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..499
                     /product="cytochrome P450 CYP749A22 isoform X1"
                     /calculated_mol_wt=56822
     Region          65..489
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(132,136,143,188,300..301,304..305,308..309,312,362,
                     371,373,396,435..437,441..445,448..449)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(210..211,300,303..304,308,369..372)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..499
                     /gene="LOC107944035"
                     /coded_by="XM_041088074.1:458..1957"
                     /db_xref="GeneID:107944035"
ORIGIN      
        1 malikllydy lwiplriqhm lnsqgikgpp yrfihgnnke vtkmkqkals ksvgltddlf
       61 pkvhphfytw tnrygknfvy wngaraelvi sepelikevl knseqifqkk qlsdigmkfl
      121 gnglifiege kwakhrklan htfhgeslkn mtpaiivsve tmlekwngqe gkeievyqef
      181 rlltsevisr tafgssyleg ekifamldks tiivsqnlsk triplisklw ksadllesek
      241 lakeiqdrlm kivkkredka vngevhsfgn dflglllnvy hdsdeknris ledlvaeckt
      301 fyfagqetvn sllawivlhl aihgdwqeka rrevvdifgn qnphlegiak lkimtmiine
      361 tlrlygptgv lqrtvtreiq lgklllpani dilplniglh rdphfwgnvv hhfkperfae
      421 giakatnyta aaffpfglgp rscvgmtfam ietkialsmi lqrytitlsp ayvhspilil
      481 tlrpqngiqv ilepihsna
//
LOCUS       XP_040944009             515 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944009
VERSION     XP_040944009.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088075.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..515
                     /product="cytochrome P450 CYP749A22 isoform X2"
                     /calculated_mol_wt=58659
     Region          81..505
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(148,152,159,204,316..317,320..321,324..325,328,378,
                     387,389,412,451..453,457..461,464..465)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(226..227,316,319..320,324,385..388)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..515
                     /gene="LOC107944035"
                     /coded_by="XM_041088075.1:415..1962"
                     /db_xref="GeneID:107944035"
ORIGIN      
        1 mnalmkllil apcfffiali kllydylwip lriqhmlnsq gikgppyrfi hgnnkevtkm
       61 kqkalsksvg ltddlfpkvh phfytwtnry gknfvywnga raelvisepe likevlknse
      121 qifqkkqlsd igmkflgngl ifiegekwak hrklanhtfh geslknmtpa iivsvetmle
      181 kwngqegkei evyqefrllt sevisrtafg ssylegekif amldkstiiv sqnlsktrip
      241 lisklwksad lleseklake iqdrlmkivk kredkavnge vhsfgndflg lllnvyhdsd
      301 eknrisledl vaecktfyfa gqetvnslla wivlhlaihg dwqekarrev vdifgnqnph
      361 legiaklkim tmiinetlrl ygptgvlqrt vtreiqlgkl llpanidilp lniglhrdph
      421 fwgnvvhhfk perfaegiak atnytaaaff pfglgprscv gmtfamietk ialsmilqry
      481 titlspayvh spililtlrp qngiqvilep ihsna
//
LOCUS       XP_040944010             480 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944010
VERSION     XP_040944010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088076.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..480
                     /product="cytochrome P450 CYP749A22 isoform X3"
                     /calculated_mol_wt=54440
     Region          46..470
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(113,117,124,169,281..282,285..286,289..290,293,343,
                     352,354,377,416..418,422..426,429..430)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(191..192,281,284..285,289,350..353)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..480
                     /gene="LOC107944035"
                     /coded_by="XM_041088076.1:279..1721"
                     /db_xref="GeneID:107944035"
ORIGIN      
        1 mlnsqgikgp pyrfihgnnk evtkmkqkal sksvgltddl fpkvhphfyt wtnrygknfv
       61 ywngaraelv isepelikev lknseqifqk kqlsdigmkf lgnglifieg ekwakhrkla
      121 nhtfhgeslk nmtpaiivsv etmlekwngq egkeievyqe frlltsevis rtafgssyle
      181 gekifamldk stiivsqnls ktripliskl wksadllese klakeiqdrl mkivkkredk
      241 avngevhsfg ndflglllnv yhdsdeknri sledlvaeck tfyfagqetv nsllawivlh
      301 laihgdwqek arrevvdifg nqnphlegia klkimtmiin etlrlygptg vlqrtvtrei
      361 qlgklllpan idilplnigl hrdphfwgnv vhhfkperfa egiakatnyt aaaffpfglg
      421 prscvgmtfa mietkialsm ilqrytitls payvhspili ltlrpqngiq vilepihsna
//
LOCUS       XP_040944011             451 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944011
VERSION     XP_040944011.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088077.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..451
                     /product="cytochrome P450 CYP749A22 isoform X4"
                     /calculated_mol_wt=51171
     Region          27..441
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(84,88,95,140,252..253,256..257,260..261,264,314,323,
                     325,348,387..389,393..397,400..401)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(162..163,252,255..256,260,321..324)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..451
                     /gene="LOC107944035"
                     /coded_by="XM_041088077.1:399..1754"
                     /db_xref="GeneID:107944035"
ORIGIN      
        1 miyfpkyihi ftpgptdmtl flfmllgknf vywngarael visepelike vlknseqifq
       61 kkqlsdigmk flgnglifie gekwakhrkl anhtfhgesl knmtpaiivs vetmlekwng
      121 qegkeievyq efrlltsevi srtafgssyl egekifamld kstiivsqnl sktriplisk
      181 lwksadlles eklakeiqdr lmkivkkred kavngevhsf gndflgllln vyhdsdeknr
      241 isledlvaec ktfyfagqet vnsllawivl hlaihgdwqe karrevvdif gnqnphlegi
      301 aklkimtmii netlrlygpt gvlqrtvtre iqlgklllpa nidilplnig lhrdphfwgn
      361 vvhhfkperf aegiakatny taaaffpfgl gprscvgmtf amietkials milqrytitl
      421 spayvhspil iltlrpqngi qvilepihsn a
//
LOCUS       XP_016697950             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016697950
VERSION     XP_016697950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016842461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58568
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107913814"
                     /coded_by="XM_016842461.2:194..1744"
                     /db_xref="GeneID:107913814"
ORIGIN      
        1 mstlvklaih lpcsfflval ikflydylwi plrlqhmmns qgikgppytf ihgnnkeatk
       61 ttnealskpm alrhdifprv qphvyscvnr ygrnylawdg krpelvitep elvnevlkns
      121 vttfpkrkpt ffltgifgng lvtalgekwv kqrklanyaf hgeslknmtp aviagveaml
      181 ekwkgyvgke ievyhefrll tsevisrtaf gssylegeki fdmlnklsii rsrnlfetri
      241 plinklwksg dvleseelsk giqdcvmkiv kkredkvvng eadsfgndfl gllvnayhds
      301 dknnrlsted lvdecktfyf agqdtvnsll awivfllaih gdwqekarre vieifgnqip
      361 nseemsklki mtmiiyetlr lygpsngmmr rtesdvqlgk lilpanldll vihaaphhdp
      421 qlwgddvhlf kperfaegia katnynagvf cpfglgprnc vgmnfattet kivlsmilqr
      481 ytislsptyv hspipyitvq pqhgiqvile slynda
//
LOCUS       XP_016714316             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016714316
VERSION     XP_016714316.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858827.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714316.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58681
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107927725"
                     /coded_by="XM_016858827.2:323..1873"
                     /db_xref="GeneID:107927725"
ORIGIN      
        1 msalmelvtl vpccfffial ikflydylwi plriqhmlns qgikgppyrf ihgnnkeiak
       61 mrqeasikpm althdifpkv qpqiyswink ygrnylfwng vraelvisep elvreilkns
      121 ektfpkrkpt iylskllgng lvtvegekwa kqrklanyaf hgeslknmtp aviasvetml
      181 ekwkgqegke ievfhefrll tsevisrtaf gssylegekv famlnklsii msrnlyntri
      241 plinklwkpa dmleseelak eiqycvmkmv kkredkvvng eadsfgndfl gllvnayhds
      301 dktnklsmed lvdecktfyf agqdtvnall awtvlllaih gdwqdkarre vigifgnrnp
      361 qpegiaklkt mtmiinetlr lygpsngmlr rvgrevqmek vvlpanidil ianvalhhdp
      421 qlwgedvhlf kpdrfaegia katnynpaaf fpfglgprtc vgmtfattet kivlsmilqr
      481 yaitlspayv hspipiislk pqhgiqvilk slhsda
//
LOCUS       XP_016714268             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016714268
VERSION     XP_016714268.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714268.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58494
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107927670"
                     /coded_by="XM_016858779.2:110..1660"
                     /db_xref="GeneID:107927670"
ORIGIN      
        1 msglmklvil vpcslffaal vkflydylwr plriqqmlns qgirgppyrf ihgnnkevak
       61 mrqealskpm alrhdifprv qphidtwine ygrnylswdg vraelvisep dlikevlkns
      121 ekafpkrklt lflskllgng latvegekwe krrklgnyaf hgeslknmtp aiiasvetml
      181 ekwkgyvgke ievfeefrll tsevisrtaf gstylegqki fymlsklaii anrsffktri
      241 pwisklwksa dileseelan eiqgcvmkmi kkredrvvng eadsfgndfl gllvkayhdl
      301 ddkdmlslgd lvdecktfyl agqdtvngll awtvlllaih gdwqekarre vieifgnqnp
      361 hpesivklki mtmiinetlr lyglqngiir evgrevqign lvlpanidly ianvvpqhdp
      421 qlwgddvhlf kperfaegia katnynaaaf cpfgigprsc vgmsfatmet kialsmilqr
      481 ytislspayv hspisvlgiq pehgiqvilk sldsnv
//
LOCUS       XP_040944012             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_040944012
VERSION     XP_040944012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088078.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58609
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410675"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410675"
     CDS             1..516
                     /gene="LOC121214436"
                     /coded_by="XM_041088078.1:181..1731"
                     /db_xref="GeneID:121214436"
ORIGIN      
        1 msglmklvil vlcslffaal vkflydylwr plriqqmlns qgirgppyrf ihgnnkevak
       61 mrqealskpm alrhdifprv qphiytwink ygknylswdg vraelvisep elikevlkns
      121 ekafpkrklt lflsklvgng lvtvegekwv kqrklgnyaf hgeslknmtp aviasvetml
      181 emwrgyvgke ielfqefrll tsevisrtaf gssylegqki fdmlsklaii lhrnlfktri
      241 pwisklwkpa dileseelan eiqgcvmkmi kkredrvvng eadsfgndfl gllvnayhdl
      301 ddknmlslgd lvdecktfyl agqdtvnsll awtvfllaih gdwqekarre vieifgnqnp
      361 hpesivklki mtmiinetlr lygpanglmr kvgrevqigk lvlpanidly vanvvpqhdp
      421 qlwgddvhlf kperfaegia katkynaaaf cpfgigprsc vgmsfatmet kialsmilqr
      481 ytislspayv hspisvitiq pehgiqvilk slhsnv
//
LOCUS       XP_040944013             184 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22-like [Gossypium hirsutum].
ACCESSION   XP_040944013
VERSION     XP_040944013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088079.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="cytochrome P450 CYP749A22-like"
                     /calculated_mol_wt=20035
     Region          <2..174
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     CDS             1..184
                     /gene="LOC107927722"
                     /coded_by="XM_041088079.1:130..684"
                     /db_xref="GeneID:107927722"
ORIGIN      
        1 mvlllashgd wqekasrevi eifgnqypns eglsklkimt miineslrly gpavgllrkg
       61 gsevrlgnlv lpadidilia nvalhhdpqq wgddvhlfkp erfaegvaka tnyntaafcp
      121 fglgprtcvg ttfalmeaki avsmilqryt islspayvha pvsiitvkpq hgiqvilesl
      181 hhda
//
LOCUS       XP_016714324             349 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016714324
VERSION     XP_016714324.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858835.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714324.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=38990
     Region          <1..339
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(38,150..151,154..155,158..159,162,212,221,223,246,
                     285..287,291..295,298..299)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(60..61,150,153..154,158,219..222)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..349
                     /gene="LOC107927731"
                     /coded_by="XM_016858835.2:581..1630"
                     /db_xref="GeneID:107927731"
ORIGIN      
        1 mtpaviasve tmlekrkgyv gkeievfeef rlltsevisr tafgssyleg qkifymlsrl
       61 aiianrnlfk tripwiskll kpadilesee lsneiqgcvm kmikkredrv vngeadsfgn
      121 dflgllvnay hdlddknkls lgdlvdeckt fylagqdtvn sllawtvfll aihgdwqeka
      181 rrevidifgn qnphpesivk lkimtmiine tlrlygpang lmrkvgrevq tgklvlpani
      241 dlyianvvpq hdpqlwgddv hlfkperfae giakatnyna avfcpfgigp rscvgmsfat
      301 meikialsmi lqrctislsl ayvhspisvv tvqpehgiqv ilksldsnv
//
LOCUS       XP_040944014             349 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22-like [Gossypium hirsutum].
ACCESSION   XP_040944014
VERSION     XP_040944014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088080.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="cytochrome P450 CYP749A22-like"
                     /calculated_mol_wt=38704
     Region          <1..339
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(38,150..151,154..155,158..159,162,212,221,223,246,
                     285..287,291..295,298..299)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(60..61,150,153..154,158,219..222)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..349
                     /gene="LOC107927732"
                     /coded_by="XM_041088080.1:621..1670"
                     /db_xref="GeneID:107927732"
ORIGIN      
        1 mrlaiiasve tmlkkwkgqv gkeievfhef kllttevisr tafgssyleg ekifemlnkl
       61 sivlsrnlsn tgiplfvklq kpsdmleaee lakgiqdsvs kivktredkv vkgeadnfgi
      121 dflgllinay hdtdennkls ledlvdeckt fyfagqdtvn sllawmvlll ashgdwqeka
      181 rrevmeifgn qypnseglsk lkimtmiine slrlygpavg llrkggsevr lgnlvlpadi
      241 dilianvalh hdpqlwgydv hlfkperfae giakatnynt aafcpfglgp rtcvgtafal
      301 meakiavsmi lqrytislsp ayvhapvsii tvkpqhgiqv tleslhhda
//
LOCUS       XP_040944015             349 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22-like [Gossypium hirsutum].
ACCESSION   XP_040944015
VERSION     XP_040944015.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088081.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="cytochrome P450 CYP749A22-like"
                     /calculated_mol_wt=38704
     Region          <1..339
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(38,150..151,154..155,158..159,162,212,221,223,246,
                     285..287,291..295,298..299)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(60..61,150,153..154,158,219..222)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..349
                     /gene="LOC107927732"
                     /coded_by="XM_041088081.1:700..1749"
                     /db_xref="GeneID:107927732"
ORIGIN      
        1 mrlaiiasve tmlkkwkgqv gkeievfhef kllttevisr tafgssyleg ekifemlnkl
       61 sivlsrnlsn tgiplfvklq kpsdmleaee lakgiqdsvs kivktredkv vkgeadnfgi
      121 dflgllinay hdtdennkls ledlvdeckt fyfagqdtvn sllawmvlll ashgdwqeka
      181 rrevmeifgn qypnseglsk lkimtmiine slrlygpavg llrkggsevr lgnlvlpadi
      241 dilianvalh hdpqlwgydv hlfkperfae giakatnynt aafcpfglgp rtcvgtafal
      301 meakiavsmi lqrytislsp ayvhapvsii tvkpqhgiqv tleslhhda
//
LOCUS       XP_016714318             516 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016714318
VERSION     XP_016714318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858829.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58622
     Region          81..506
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,317..318,321..322,325..326,329,379,
                     388,390,413,452..454,458..462,465..466)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,317,320..321,325,386..389)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..516
                     /gene="LOC107927726"
                     /coded_by="XM_016858829.2:17..1567"
                     /db_xref="GeneID:107927726"
ORIGIN      
        1 msallklail vpccsfival irflydylwr plrlqhkmss qgirgppygf ihgnnkeatk
       61 mtkealskpm alrhdifprv qphiyscvnk ygrnylswdg nrpelvitep elanevlkhs
      121 vttfpkrkpt vfvsrifgng lvtalgekwv kqrklanyaf hgeslqnmtp aviasvetml
      181 ekwkgyagke mevyhefrll tsevisrtaf gssylegeki fdmlnklsii rsrnlfetri
      241 plinklwksg dvleseelsk giqdcvmniv kkredevvnr kansfgndfl gllvnayhds
      301 dennrllmed lvdecktfyf agqdtvnsll awivfllaih gdwqekarre vieifsnrip
      361 dsegmsklkt mtmiiyetlr lygppnglpr rvtkevqlgk lvlpasidil vqniaphhdp
      421 hmwgddvhlf kperfaegia katnynagaf cpfglgprnc vgmnfaimet kivlsmilqr
      481 ytislsptyv hspipyitvq pqhgiqvile slgnda
//
LOCUS       XP_040944016             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944016
VERSION     XP_040944016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088082.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20759
     CDS             1..186
                     /gene="LOC121214438"
                     /coded_by="XM_041088082.1:93..653"
                     /db_xref="GeneID:121214438"
ORIGIN      
        1 mvteavsgne aenrqsfnna vyadgsffgp gtislrkiqq fpkhdtvklg ernfllwkqq
       61 vllilegygl hefalgtvsi lpqsllmqkk cslivkldnk sfsrmclfrl ilfnsveilm
      121 tpsvkvigvl ellteamegf leveveegss vilkpnvnyv nelvmlsrsv iiilmkilkd
      181 lnvvli
//
LOCUS       XP_016714320             511 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016714320
VERSION     XP_016714320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858831.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=57939
     Region          77..502
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(145,149,156,201,313..314,317..318,321..322,325,375,
                     384,386,409,448..450,454..458,461..462)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(223..224,313,316..317,321,382..385)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..511
                     /gene="LOC107927728"
                     /coded_by="XM_016858831.2:466..2001"
                     /db_xref="GeneID:107927728"
ORIGIN      
        1 mglvilvpws fflialtkfl yhylwvplri qhmmnsqgik gppyrfihgn nkevtkmkke
       61 alskavgltd dlfprlqphi yswintygkn fvywngvrae vvisepelik evmknsenif
      121 qkrkltdvga kllgnglafi egekwakhrk lsnhafhges lenmtpaiia svetmlekwk
      181 glevkeidvy nefrfltsev isriafgsny legekifaml nklkilvsqn ihktaipfin
      241 klwkpadmle seklekgiqd cvmemikkre dkvvsgeads fgtdflgllv nayhdlddkn
      301 rvsledlvge cktiyyagre nvnsllawiv lhlaihgdwq ekarrevidi fgnqnphleg
      361 iaklkimtmi inetlrlygp shglprtvar egqlgkfilp adidilslni gphrdphlwg
      421 ddvhlfkper faegiakatn ytaaaffpfg lgprscvgmt latietkial smilqrytit
      481 isptyvhspi aiitiqpqhg iqiileplhs c
//
LOCUS       XP_016714277             684 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714277
VERSION     XP_016714277.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858788.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714277.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..684
                     /product="uncharacterized protein"
                     /calculated_mol_wt=77000
     Region          273..364
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     Region          <312..572
                     /region_name="Cast"
                     /note="RIM-binding protein of the cytomatrix active zone;
                     pfam10174"
                     /db_xref="CDD:431111"
     CDS             1..684
                     /gene="LOC107927678"
                     /coded_by="XM_016858788.2:168..2222"
                     /db_xref="GeneID:107927678"
ORIGIN      
        1 macnvmnswt ftgivgafld lfiaylylcg stlaylasrf lglfglslpc pcnglfgyle
       61 kknrfqatlv hdpcrrispv qysitkrlpf daiwnnfydd gedddddepr nsqlnsdywq
      121 dgkvemerea sssswngkkn tfvgvkngnf gqihkwkgrp kvgirrrkri dsflggkvss
      181 spndplvsit tptgfnssat fvklgndvte esttpvhsed gketakdigg pkqsfqgpqm
      241 dydsfaenks vdekeiamai krsasaqdfd ggrvlgqald eehatcaaly ielekernaa
      301 ataadeamam ilrlqeekaa iemeakqyrr mieakftyda eemnilkeil lrrekekyfl
      361 eketesykqm lygkeqldad mydtaatheq gmssewellr vqqvndlfre kdktkvnidf
      421 megiavteln eaatflsssi ensdahmfrs ddeinaived keqcnetnph qhlalkttea
      481 kmifpynnek venlgkglhr sdsgsdfrvf dvhvinnasn vknkegekri ekkligvssn
      541 spktcdnqti ggveiepgrk gnssersegl ppihpsrpky lhrksksafd yerlkidnev
      601 gwlrerlkiv qlgreklnfp aghkgreqve lqimediatq lrdrrqltes gkalpqapll
      661 ppsskvmskk rhkqsaslgg lgsi
//
LOCUS       XP_016714319             514 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 CYP749A22 [Gossypium hirsutum].
ACCESSION   XP_016714319
VERSION     XP_016714319.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858830.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..514
                     /product="cytochrome P450 CYP749A22"
                     /calculated_mol_wt=58418
     Region          81..504
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(149,153,160,205,315..316,319..320,323..324,327,377,
                     386,388,411,450..452,456..460,463..464)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(227..228,315,318..319,323,384..387)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..514
                     /gene="LOC107927727"
                     /coded_by="XM_016858830.2:127..1671"
                     /db_xref="GeneID:107927727"
ORIGIN      
        1 msaltklail fpccfilvaf vkllydylwr plrlqhmmss qgikgppytf ihgnnkeaaq
       61 mtmealskpm alrhdifprv qphvyscvnr ygrnylawdg nrpelvitea elvnevlkhs
      121 vttfpkrkpt ffltglfgng lvtalgekwv kqrklanyaf hgeslknmtp aviasvetml
      181 ekwkgyvgke ievyhefrll tsevisrtaf gssylegeki fdmlnklsii rsrnlwntpl
      241 inklwksadm leseelskgi qdcvmkivkk redkvengea nsfgndflgl lvkayhdpdk
      301 nnrlsmedlv decktfyfag qdtvnsllaw mvfllaihgd wqekarrevf eifgnqipds
      361 edisklkilt miiyetlrly gpsiammrra erevrlgklv lpanldllvv hsaahhdpql
      421 wgdevhlfkp erfaegiaka inynvgafcp fglgprncvg mnfaiteaki alsmilqlyt
      481 islspayvhs pipyitvqpq hgiqvilesl hnda
//
LOCUS       XP_016714322             303 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHR1-LIKE 3 [Gossypium hirsutum].
ACCESSION   XP_016714322
VERSION     XP_016714322.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858833.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714322.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="protein PHR1-LIKE 3"
                     /calculated_mol_wt=33016
     Region          39..95
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          137..181
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..303
                     /gene="LOC107927729"
                     /coded_by="XM_016858833.2:183..1094"
                     /db_xref="GeneID:107927729"
ORIGIN      
        1 mysgirslsl dgcvgdyqgs ldgtnlpgda clvlttdpkp rlrwtaelhe rfvdavtqlg
       61 gpdkatpkti mrtmgvkglt lyhlkshlqk yrlgkqsake stdnskdvss iaerqdtgss
      121 ttassrmvaq dmndgyqvte alrvqmevqr klheqlevqr rlqlrieaqg kylqsileka
      181 ctalndeaaa stgleaaree lselaikvsn dcqgmipldn iklpslseft aalenktasn
      241 mptrigdcsi esfltssrsp lsqtgvgsqa vtmkrprppf gigdpfplgg irqeiewvmp
      301 nis
//
LOCUS       XP_016714263             676 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714263
VERSION     XP_016714263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858774.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..676
                     /product="uncharacterized protein"
                     /calculated_mol_wt=78119
     Region          6..53
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          64..112
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          243..285
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          397..444
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          510..556
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          568..614
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..676
                     /gene="LOC107927665"
                     /coded_by="XM_016858774.2:456..2486"
                     /db_xref="GeneID:107927665"
ORIGIN      
        1 meiqhfshhh plvfiqahsv askaalclgc qkpvegwsyg cnqcefylhk gcaelelapk
       61 iqhpfhpkhp ltllpkspys sgisgcdlcg knfegfvync fdcefdlhin callqssiaa
      121 nfpnslhphp lhffqnynke vepdcpgcqk pisgpfyhcs dctypivfnl hkecaelple
      181 inhpcdrkhp ltllpqppth pqkcscslcr iqwkgfvysc slcnfdlsld dflfspptit
      241 vashehpwml vsrkmwfvcd fcgtdgdhsp yhcdtcvlfv hkncislprh imitrhrhti
      301 slsysfrqnq vedwmckiyy eevdisyghy rcpasrcryi ahvlcatdka iwdgtimpeg
      361 ydkrseevvd epwnlitdvv eqirigelmv aseikhsyhd hnlrltfsrk tkdddsqcdg
      421 ctrpistpfy scdqckfflh kdcaklpeem phpfhkhllt lsnshdeygy slccachrly
      481 qgfsyrcyeg dcsfeidiqc mllsdtlkhp shehslffvh nsegtscsac fqrlyswdva
      541 yrcmrrcdfs ldvgcatlpl tawykydrhp ltltysddfe psqlycdlce kerepnrwfy
      601 ycadcdnslh lncaigdlpy mklgnklkey whkhpftvvk niwncplckv cgevcngqal
      661 eckesecnft vhlncl
//
LOCUS       XP_016714346            1009 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 1 homolog A [Gossypium
            hirsutum].
ACCESSION   XP_016714346
VERSION     XP_016714346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1009
                     /product="26S proteasome non-ATPase regulatory subunit 1
                     homolog A"
                     /calculated_mol_wt=109676
     Region          7..966
                     /region_name="RPN2"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5116"
                     /db_xref="CDD:227446"
     Region          583..607
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(599..600,603,606..607,635..636,639,642..643,646,
                     669..670,673,676..677,680,704..705,708,711..712)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          617..646
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          653..681
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          686..712
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1009
                     /gene="LOC107927755"
                     /coded_by="XM_016858857.2:299..3328"
                     /db_xref="GeneID:107927755"
ORIGIN      
        1 maasaatmvs saggllamln eshpqlklha ltnligfvdq fwpeistsvp iieslyedee
       61 fgqhqrqlaa llvskvfyyl gelndslsya lgagplfdvs edsdhvhtll akaideyasf
      121 rskaaessde aakvdprlee ivermldkci mdrkyqqamg iaiecrrldk leeaitrsen
      181 vhailaycth vshsfvyrre yrrevlrllv kvyqklpspd ylstsqclmf ldepegvani
      241 lekllrsenk edallafqva fdlvenehqa fllnvrdrls apkslpsepv qpgstnpapa
      301 enenstased vqmtdgssai ttnvheadpk eviyaerlmk vkgilsgets iqltlqflys
      361 hnksdllilk tikqsvemrn svchsatiya naimhagttv dtflrdnldw lsratnwakf
      421 sataglgvih rghlqqgrsl mapylpqgga ggggspyseg galyalglih anhgegikqf
      481 lrdslrntnv eviqhgaclg lglaalgtad eeiyediksv lytdsavage aagisigllm
      541 vgtasekase mlayahetqh ekiirglalg ialtvygree eadtlieqmt rdqdpiiryg
      601 gmyalalayr gtannkairq llhfavsdvs ddvrrtavla lgfvlysepe qtprivslls
      661 esynphvryg aalavgisca gtglseaisl lepltsdvvd fvrqgaliam amvmiqinea
      721 sdsrvgtfrr qlekiildkh edtmskmgai lasgildagg rnvtirllsk tkhdkitavv
      781 glavfsqfwy wypliyfvsl sfsptafigl nydlkvprfe flshakpslf eypkpttvpt
      841 ttsavklpta vlstsakaka rakkeaeqka kaekssgves sssasitgkg ksssekdgea
      901 mqvdgppekk aepepsfeil tnparvvpaq ekfikfleds ryapvklaps gfvllrdlrp
      961 depealsltd apalaaspag gsaagqqsss samavddepq ppqpfefts
//
LOCUS       XP_016714311             257 aa            linear   PLN 06-AUG-2024
DEFINITION  classical arabinogalactan protein 9 [Gossypium hirsutum].
ACCESSION   XP_016714311
VERSION     XP_016714311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858822.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..257
                     /product="classical arabinogalactan protein 9"
                     /calculated_mol_wt=27273
     Region          169..253
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..257
                     /gene="LOC107927718"
                     /coded_by="XM_016858822.2:329..1102"
                     /db_xref="GeneID:107927718"
ORIGIN      
        1 mgskicmlll ystmaatllt hcdartsmgm mndpkhgrss vikhtnklql msklmslvme
       61 qptdnsntqp ygvsspfslp pfdslpplns ppyfppppst sgtvlspnpp gvlpsppqti
      121 ptpmspsgpi lsppspiesn psptvffppi vyppptvppp pnmapttalw cvakpsvpdp
      181 iiqeamnyac aagadcdsiq psgscfqpds lfahasyafn sywqkskldg gscefggtai
      241 lvaidpsyng chfeyqy
//
LOCUS       XP_016714328             361 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714328
VERSION     XP_016714328.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858839.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..361
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=40028
     CDS             1..361
                     /gene="LOC107927736"
                     /coded_by="XM_016858839.2:104..1189"
                     /db_xref="GeneID:107927736"
ORIGIN      
        1 mkifhlflis lllfsfskae sngsvffids sthqflraqs tndlaqsesi llpevgaavs
       61 vvaptvtlsa fgssklnevl ipnpfdrpra vfifevggid dplvvepkna lfskalknsv
      121 dlgsskadil fpddedlsmi sldhplgdyc eeeinefasw lggsyatdvt kpldgvltip
      181 langdnmnlh mskkvhrefa sklfalyrni rkamerhedl sqilrrpael imgsfdgikh
      241 dtdgfdkqgm rlllatlnri fdslqttyeg hivgvilfng vpqpesktlm nmmytshpsp
      301 rwleetkssl nttlaaqmlv rrtlawitgv vlliatllgv yfllnmpltr dtllysnvkl
      361 d
//
LOCUS       XP_016714329             357 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714329
VERSION     XP_016714329.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858840.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=39564
     CDS             1..357
                     /gene="LOC107927736"
                     /coded_by="XM_016858840.2:104..1177"
                     /db_xref="GeneID:107927736"
ORIGIN      
        1 mkifhlflis lllfsfskae sngsvffids sthqflraqs tndlaqsesi llpevgaavs
       61 vvaptvtlsa fgssklnevl ipnpfdrpra vfifevggid dplvvepkna lfskalknsv
      121 dlgsskadil fpddedlsmi sldhplgdyc eeeinefasw lggsyatdvt kpldgvltip
      181 langfdclqk vhrefasklf alyrnirkam erhedlsqil rrpaelimgs fdgikhdtdg
      241 fdkqgmrlll atlnrifdsl qttyeghivg vilfngvpqp esktlmnmmy tshpsprwle
      301 etksslnttl aaqmlvrrtl awitgvvlli atllgvyfll nmpltrdtll ysnvkld
//
LOCUS       XP_040944017             256 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich protein 23-like [Gossypium hirsutum].
ACCESSION   XP_040944017
VERSION     XP_040944017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088083.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="glycine-rich protein 23-like"
                     /calculated_mol_wt=24271
     CDS             1..256
                     /gene="LOC107927737"
                     /coded_by="XM_041088083.1:1374..2144"
                     /db_xref="GeneID:107927737"
ORIGIN      
        1 mlldkmgpft sfvmvtilcv hlmnglaiad dhnvdendsh pyvfeerlka kgnrryltll
       61 pliigahalh rrarvagkaw hggegantgv gdgfqssgni agaggaagag geggggkgva
      121 gggsggggag ggvgggggma tgggfhfgfr ggiragfgen rvgsgrinvg ggagghlegv
      181 gsaatstsgs lnrakgndgk asdsskseak dgfegkirpn vgvgggfqss gnivgvgggr
      241 gggggggmaa egkvgg
//
LOCUS       XP_040944018            1043 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized PE-PGRS family protein PE_PGRS54 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944018
VERSION     XP_040944018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088084.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1043
                     /product="uncharacterized PE-PGRS family protein PE_PGRS54
                     isoform X1"
                     /calculated_mol_wt=98810
     Region          <386..>596
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <588..>854
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1043
                     /gene="LOC107927685"
                     /coded_by="XM_041088084.1:105..3236"
                     /db_xref="GeneID:107927685"
ORIGIN      
        1 mplnkmghft yfviviilcl lflngpaian dhdvngnenh hphvykerlk tkgsrrsltv
       61 lpivagahdv hqgekavaga attdkafhsg ggakagvgge fqsngnivga gggggegggg
      121 ngggsssdkn ggvgigghag mtggggfkfg frggmraglg gsgganvgge vggraagvgn
      181 gatstsasln gekssdgkvs dtnkiegkag fegkvrgqge vggnsggsgn tgdagkvggh
      241 ggsvdngntd asgtyngekg sdgkasatsk geakvgfegk vggkgdgggk sggtsstnvv
      301 gggvgsgstd asgsivgvgg aggggggsgs ggkggdatas ghagmagggg frfgfrggmr
      361 vgfgesggas vgggagghar gvgsgatsts gsigetkssd akasdnfsgs sgvkgqgggd
      421 gsgnidasgk deakaktegk fggqgkvdgn sggsdsssyy dgvkgqggrd gsgntnasgk
      481 ekgqgrgdgs gnidasgrek gkgrgdgsgn idasgkdeak vkakaggnfg gqgkvdensg
      541 gsdsssdsgg vkgqgggdgs gntdasgkek gpggrdgsdn knasgkyeak nkaevegkfg
      601 gqgkvdensg gndrsnnsve vkgqgggdgs gdtdtsgkqk gqgggdssgn tntsgkdeak
      661 dkakvegkfe gqgkvdgnsg gsdssndssg vkrqgggngs gntdasdkek gqgggygsgn
      721 tnasgkdeak gkaeaegnfg gqgkvdgnsg gsdssndsgg vkgqgggdgs gntnasgkdk
      781 akgkaevegn fggqgkvdgn sgesdsfnds ggvkgqgggd gsgntnasgk deakakaetq
      841 pqakakdevk aedeaqakvk deakaeseak akskeeakae aeakaeakse akaeakakte
      901 gkveaeaeae akaeakaean teakakakae iggqgkvggn ggggeakaeg nakaeaeaka
      961 eaeakaevea eakaeaetea nneakakaka egkaeakaea kaeiggqrkv sgnggggggn
     1021 vgggfkfgfg gkvergggfs gah
//
LOCUS       XP_040944019            1043 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized PE-PGRS family protein PE_PGRS54 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944019
VERSION     XP_040944019.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088085.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1043
                     /product="uncharacterized PE-PGRS family protein PE_PGRS54
                     isoform X2"
                     /calculated_mol_wt=98810
     Region          <386..>596
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <588..>854
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1043
                     /gene="LOC107927685"
                     /coded_by="XM_041088085.1:105..3236"
                     /db_xref="GeneID:107927685"
ORIGIN      
        1 mplnkmghft yfviviilcl lflngpaian dhdvngnenh hphvykerlk tkgsrrsltv
       61 lpivagahdv hqgekavaga attdkafhsg ggakagvgge fqsngnivga gggggegggg
      121 ngggsssdkn ggvgigghag mtggggfkfg frggmraglg gsgganvgge vggraagvgn
      181 gatstsasln gekssdgkvs dtnkiegkag fegkvrgqge vggnsggsgn tgdagkvggh
      241 ggsvdngntd asgtyngekg sdgkasatsk geakvgfegk vggkgdgggk sggtsstnvv
      301 gggvgsgstd asgsivgvgg aggggggsgs ggkggdatas ghagmagggg frfgfrggmr
      361 vgfgesggas vgggagghar gvgsgatsts gsigetkssd akasdnfsgs sgvkgqgggd
      421 gsgnidasgk deakaktegk fggqgkvdgn sggsdsssyy dgvkgqggrd gsgntnasgk
      481 ekgqgrgdgs gnidasgrek gkgrgdgsgn idasgkdeak vkakaggnfg gqgkvdensg
      541 gsdsssdsgg vkgqgggdgs gntdasgkek gpggrdgsdn knasgkyeak nkaevegkfg
      601 gqgkvdensg gndrsnnsve vkgqgggdgs gdtdtsgkqk gqgggdssgn tntsgkdeak
      661 dkakvegkfe gqgkvdgnsg gsdssndssg vkrqgggngs gntdasdkek gqgggygsgn
      721 tnasgkdeak gkaeaegnfg gqgkvdgnsg gsdssndsgg vkgqgggdgs gntnasgkdk
      781 akgkaevegn fggqgkvdgn sgesdsfnds ggvkgqgggd gsgntnasgk deakakaetq
      841 pqakakdevk aedeaqakvk deakaeseak akskeeakae aeakaeakse akaeakakte
      901 gkveaeaeae akaeakaean teakakakae iggqgkvggn ggggeakaeg nakaeaeaka
      961 eaeakaevea eakaeaetea nneakakaka egkaeakaea kaeiggqrkv sgnggggggn
     1021 vgggfkfgfg gkvergggfs gah
//
LOCUS       XP_040944020             937 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized PE-PGRS family protein PE_PGRS54 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040944020
VERSION     XP_040944020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088086.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..937
                     /product="uncharacterized PE-PGRS family protein PE_PGRS54
                     isoform X3"
                     /calculated_mol_wt=88256
     CDS             1..937
                     /gene="LOC107927685"
                     /coded_by="XM_041088086.1:106..2919"
                     /db_xref="GeneID:107927685"
ORIGIN      
        1 mplnkmghft yfviviilcl lflngpaian dhdvngnenh hphvykerlk tkgsrrsltv
       61 lpivagahdv hqgekavaga attdkafhsg ggakagvgge fqsngnivga gggggegggg
      121 ngggsssdkn ggvgigghag mtggggfkfg frggmraglg gsgganvgge vggraagvgn
      181 gatstsasln gekssdgkvs dtnkiegkag fegkvrgqge vggnsggsgn tgdagkvggh
      241 ggsvdngntd asgtyngekg sdgkasatsk geakvgfegk vggkgdgggk sggtsstnvv
      301 gggvgsgstd asgsivgvgg aggggggsgs ggkggdatas ghagmagggg frfgfrggmr
      361 vgfgesggas vgggagghar gvgsgatsts gsigetkssd akasdnfsgs sgvkgqgggd
      421 gsgnidasgk deakaktegk fggqgkvdgn sggsdsssyy dgvkgqggrd gsgntnasgk
      481 ekgqgrgdgs gnidasgrek gkgrgdgsgn idasgkdeak vkakaggnfg gqgkvdensg
      541 gsdsssdsgg vkgqgggdgs gntnasgkdk akgkaevegn fggqgkvdgn sggsdssnds
      601 ggvkgqgggy gsgntnasgk deakgkaeae gnfggqgkvd gnsggsdssn dsggvkgqgg
      661 gdgsgntnas gkdkakgkae vegnfggqgk vdgnsgesds fndsggvkgq gggdgsgntn
      721 asgkdeakak aetqpqakak devkaedeaq akvkdeakae seakakskee akaeaeakae
      781 akseakaeak aktegkveae aeaeakaeak aeanteakak akaeiggqgk vggnggggea
      841 kaegnakaea eakaeaeaka eveaeakaea eteanneaka kakaegkaea kaeakaeigg
      901 qrkvsgnggg gggnvgggfk fgfggkverg ggfsgah
//
LOCUS       XP_040944021             449 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich cell wall structural protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944021
VERSION     XP_040944021.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088087.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="glycine-rich cell wall structural protein 1"
                     /calculated_mol_wt=39930
     CDS             1..449
                     /gene="LOC107927687"
                     /coded_by="XM_041088087.1:114..1463"
                     /db_xref="GeneID:107927687"
ORIGIN      
        1 mgvftwmvvp lvfyayfmdg yviagilnvd enehnllqhp dlskemaenk rnrrsltflp
       61 lvglgavgaa gaaatgvaal kgasalkrav hqhhvagggg kgvgvggnig gqgefggkgs
      121 gniaggksvg fggniggqge fggkgsgsgs sniasdksvg fggniggqgg fggkgggsgs
      181 gniaggvggq ggfegkgggs gsanvvggvg gqggfvgkgg gsgsanvagg vggqggfggk
      241 ggrsgspnva ggvggqggfg gkgggsgsgs anvdggfggk gefggkgggt snanfaggfv
      301 gqggfsgkgg gtgsasdsan vaggvggqgg fggkggasgs anfaggvggq ggfggkgggs
      361 sianvaggik gkggfggsgs tnviggvrgq ggfggkgggs gsanvaggag geggfsgkgg
      421 gsgsgnlhfg gsgkfhfglg rgegfgggn
//
LOCUS       XP_016714389             648 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat domain-containing protein 13C-B [Gossypium
            hirsutum].
ACCESSION   XP_016714389
VERSION     XP_016714389.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858900.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714389.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..648
                     /product="ankyrin repeat domain-containing protein 13C-B"
                     /calculated_mol_wt=72937
     Region          <2..124
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          11..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          71..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..623
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; pfam11904"
                     /db_xref="CDD:463391"
     CDS             1..648
                     /gene="LOC107927787"
                     /coded_by="XM_016858900.2:813..2759"
                     /db_xref="GeneID:107927787"
ORIGIN      
        1 magidvskya hspvhvavat rdygslrril ealprlgnpd eiqteaasla eeekaeeiaa
       61 vidrrdvpnr dtplhlavkl gdetatkmlm aagadwslqn eqgwsalqea icnreesiam
      121 iivrdyqpla wakwcrrlpr lvgtmrrmrd fymeitfhfe ssvipfisri apsdtykiwk
      181 tganlradmt lagfdgfriq rsdqsilflg dgsedgkvpp gslcmishkd kevmnaldga
      241 gsqatdeevr kevvamsqts ifrpgidvtq avllpqltwr rqektemvga wkakvydmhn
      301 vvvsiksrrv pgaltddefl gtsneneaas eeldeiltee errqlevalk ldssemsnes
      361 edgiighqhs gyesreipie etngfknget kqekkgwfgg wrkketkhdv qrkvvpprss
      421 frvdekvsdl lgdspsrsqi kpgrhsveiv atddhrrird lristsmsse ssnrrkdssr
      481 eneykkglrp ilwlspnfpl qieellplld ilankvkair rlrellttkl pagtfpvkva
      541 ipvvptirvl vtftkfeelp pvdefstpps sptagqespa vthssgswfq wiktpyqrps
      601 ssnhsynkie nlqdpfaipp nytwitaeak kkkmqeksks kkgkglnh
//
LOCUS       XP_040944022             648 aa            linear   PLN 06-AUG-2024
DEFINITION  ankyrin repeat domain-containing protein 13C-B [Gossypium
            hirsutum].
ACCESSION   XP_040944022
VERSION     XP_040944022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088088.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..648
                     /product="ankyrin repeat domain-containing protein 13C-B"
                     /calculated_mol_wt=72937
     Region          <2..124
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          11..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          71..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..623
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; pfam11904"
                     /db_xref="CDD:463391"
     CDS             1..648
                     /gene="LOC107927787"
                     /coded_by="XM_041088088.1:1019..2965"
                     /db_xref="GeneID:107927787"
ORIGIN      
        1 magidvskya hspvhvavat rdygslrril ealprlgnpd eiqteaasla eeekaeeiaa
       61 vidrrdvpnr dtplhlavkl gdetatkmlm aagadwslqn eqgwsalqea icnreesiam
      121 iivrdyqpla wakwcrrlpr lvgtmrrmrd fymeitfhfe ssvipfisri apsdtykiwk
      181 tganlradmt lagfdgfriq rsdqsilflg dgsedgkvpp gslcmishkd kevmnaldga
      241 gsqatdeevr kevvamsqts ifrpgidvtq avllpqltwr rqektemvga wkakvydmhn
      301 vvvsiksrrv pgaltddefl gtsneneaas eeldeiltee errqlevalk ldssemsnes
      361 edgiighqhs gyesreipie etngfknget kqekkgwfgg wrkketkhdv qrkvvpprss
      421 frvdekvsdl lgdspsrsqi kpgrhsveiv atddhrrird lristsmsse ssnrrkdssr
      481 eneykkglrp ilwlspnfpl qieellplld ilankvkair rlrellttkl pagtfpvkva
      541 ipvvptirvl vtftkfeelp pvdefstpps sptagqespa vthssgswfq wiktpyqrps
      601 ssnhsynkie nlqdpfaipp nytwitaeak kkkmqeksks kkgkglnh
//
LOCUS       XP_016714387             606 aa            linear   PLN 06-AUG-2024
DEFINITION  dihydroxy-acid dehydratase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016714387
VERSION     XP_016714387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..606
                     /product="dihydroxy-acid dehydratase, chloroplastic"
                     /calculated_mol_wt=64677
     Region          53..605
                     /region_name="PRK00911"
                     /note="dihydroxy-acid dehydratase; Provisional"
                     /db_xref="CDD:234861"
     CDS             1..606
                     /gene="LOC107927784"
                     /coded_by="XM_016858898.2:139..1959"
                     /db_xref="GeneID:107927784"
ORIGIN      
        1 mqatflsprt tvlpatkpat aipyrlqclr vtaqsqatvt adppspsavk lnkyssrite
       61 pksqgasqam lygvglsedd mskpqvgiss vwyegntcnm hllklseevk rgveeagmig
      121 frfntvgvsd gismgtrgmc fslqsrdlia dsietvmsaq wydgnisipg cdknmpgtii
      181 amgrlnrpsl mvyggtikpg hfqgntydiv safqcygeyv sgsisdeqrk nvilnscpga
      241 gacggmytan tmasaieamg mslpysssip aedplkldec rlagkyllel lkmdlkprdi
      301 itqkslrnam vivmalggst navlhliaia rsvgleltld dfqkvsdevp fladlkpsgk
      361 yvmedvhkig gtpavirfll ehgyldgdcm tvtgktmaen aqsyprfpdg qdiirpvsnp
      421 ikktghiqil rgnlapegsv akitgkegly fsgpalvfeg eeamlaaise npssfkgkvv
      481 virgegpkgg pgmpemltpt saimgaglgk dvalltdgrf sggshgfvvg hicpeaqegg
      541 piglvqngdl isidvqkrai nveladaeln errkkwsppp ykanrgvlhk yiknvqpasv
      601 gcvtde
//
LOCUS       XP_016714288             976 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase-like 8 [Gossypium hirsutum].
ACCESSION   XP_016714288
VERSION     XP_016714288.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858799.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714288.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..976
                     /product="wall-associated receptor kinase-like 8"
                     /calculated_mol_wt=109434
     Region          656..926
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(656..660,664,676,678,712,728..731,735,737,780,782,
                     784..785,787,798,801,818..821)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(656..660,664,676,678,712,728..731,735,780,782,
                     784..785,787,798)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(660,735,737,780,782,784,801,818..821)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(797..804,814..821)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..976
                     /gene="LOC107927690"
                     /coded_by="XM_016858799.2:131..3061"
                     /db_xref="GeneID:107927690"
ORIGIN      
        1 mgicmvfyfi lqlpwliraa ssdcnetcgs vvirypfgir tgcyynpwfr vtcnqttngp
       61 kpfisrinle llhhfpksgd ivfvnnpviy lncdnkgnng ttssasvnlq gspfffssrf
      121 nrlgsvgcgy laaifhdnlt dpiasclqqr csdqtsefsl yrrrgttftt cyapisedii
      181 sytasvtevi ntgpesnrck svfinynnyl vsylsemkdv avsdffrgis irtthvpavl
      241 ewnpcdlgae lcalanrfng clrrcgkvdi pypfgiedgc ymhewfrvtc netidgskly
      301 issinlqlln vsvlqgtati nnsitysncl kedgdtdgvs inlkgtpflf steynifmsv
      361 gcgslttfsy slkdeypvra cmqpicanfl asdiscstdl psdlssfaan mkeiypsndt
      421 kscgsafmvd hryldslepi sskkttlthv pttlqwstpk rglcftsgsd tffyegrtys
      481 wknlsqsylc vcttyinvde nlltdscqgl desqcdkehr ycymlcvdaf gsncssstsc
      541 pdgyeysdgr emcvrktris ydpsffskkk sqkfpiiigc stsigtvfal lgtwrlykvl
      601 errkdiklkh kyfkrnggll lqqrfsnndg nvenihvfas nvlekatdyy ndnrilgrgg
      661 qgtvykgmlt dgsivaikkp ilkeekilde kkleqfinev illsqinhrn vvkllgccle
      721 tkvpllvyef ipngtlyqli hepneefpln wemrlritse ianalsylhs aasvpiyhrd
      781 ikssnilldd kyrakvsdfg tsksialekt hvttrvqgtf gyldpeyfrs sqfteksdvy
      841 sfgvvlvevl tgqkpvfstq sedevrslva ffllsmqnds lfeildqtvk dgpkteieaf
      901 aklakrclnl ngkkrptmkq valelewirs paeadgieqc adedsdiddp ielsatdscs
      961 tsglilndsv tltlda
//
LOCUS       XP_040944023             747 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944023
VERSION     XP_040944023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088089.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..747
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83560
     Region          702..743
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..747
                     /gene="LOC107927790"
                     /coded_by="XM_041088089.1:274..2517"
                     /db_xref="GeneID:107927790"
ORIGIN      
        1 medmdidsiv dipdtpdrls shqvnggnfi dkesnlsvag rvggssttge esldrqrgrg
       61 rllptnghnr khyvnplkls gstdeierpk ntiflsppec trenaplfrk tatarsrncl
      121 reqekdkgka hcsklpskss gfqedhtfld laeqrlhnqi pemeflqsas encltegrke
      181 gqvprnggsy vsrtrckgke kvevelrsid svmsngkgvd lshgsphrve kqfpashhsv
      241 vspravgkrr lvrngcisph niairakqne qsqsnfrsgq nfdnvvsssp cmlseivted
      301 nnsgkgkria hphtpkehdi nfinlssspm snngeasgfg dvnrdacfee kggwrnnfsk
      361 nlddatghhl hrfnnvgcqv sqrndngvvk rnnasrgktm ilcdspeivy atetapvisk
      421 vdqisessha nmlpkrqmkh gltsrnnges srvtrngsdi vflgssress nsrsssfhia
      481 ehldvldldn spemrginan ntdsvndeda eakarqlead eklarelqeq lyheidenia
      541 wtlqqeedal hptfrtlhep dhrvstrqsr mqpplrnfqn ssnrrgvqth fptsarvsrl
      601 rnrilnqprm apsrtrnfqf pldmdldmrl dileameaai gdsddmgmas hifqiqrdfn
      661 endyemllal ddnnhqhgga sinqinslpl skvqtdnfee acaicletpa igqnirhlpc
      721 lhkfhkncid pwlsrktscp vckssit
//
LOCUS       XP_016714393             747 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714393
VERSION     XP_016714393.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858904.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714393.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..747
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83560
     Region          702..743
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..747
                     /gene="LOC107927790"
                     /coded_by="XM_016858904.2:221..2464"
                     /db_xref="GeneID:107927790"
ORIGIN      
        1 medmdidsiv dipdtpdrls shqvnggnfi dkesnlsvag rvggssttge esldrqrgrg
       61 rllptnghnr khyvnplkls gstdeierpk ntiflsppec trenaplfrk tatarsrncl
      121 reqekdkgka hcsklpskss gfqedhtfld laeqrlhnqi pemeflqsas encltegrke
      181 gqvprnggsy vsrtrckgke kvevelrsid svmsngkgvd lshgsphrve kqfpashhsv
      241 vspravgkrr lvrngcisph niairakqne qsqsnfrsgq nfdnvvsssp cmlseivted
      301 nnsgkgkria hphtpkehdi nfinlssspm snngeasgfg dvnrdacfee kggwrnnfsk
      361 nlddatghhl hrfnnvgcqv sqrndngvvk rnnasrgktm ilcdspeivy atetapvisk
      421 vdqisessha nmlpkrqmkh gltsrnnges srvtrngsdi vflgssress nsrsssfhia
      481 ehldvldldn spemrginan ntdsvndeda eakarqlead eklarelqeq lyheidenia
      541 wtlqqeedal hptfrtlhep dhrvstrqsr mqpplrnfqn ssnrrgvqth fptsarvsrl
      601 rnrilnqprm apsrtrnfqf pldmdldmrl dileameaai gdsddmgmas hifqiqrdfn
      661 endyemllal ddnnhqhgga sinqinslpl skvqtdnfee acaicletpa igqnirhlpc
      721 lhkfhkncid pwlsrktscp vckssit
//
LOCUS       XP_016714289            1096 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714289
VERSION     XP_016714289.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858800.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714289.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1096
                     /product="uncharacterized protein"
                     /calculated_mol_wt=121919
     Region          183..278
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     Region          823..1080
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(823..827,831,842,844,881,899..902,906,908,946,948,
                     950..951,953,968,971,986..989)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(823..827,831,842,844,881,899..902,906,946,948,
                     950..951,953,968)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(827,906,908,946,948,950,971,986..989)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(967..975,985..989)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..1096
                     /gene="LOC107927692"
                     /coded_by="XM_016858800.2:671..3961"
                     /db_xref="GeneID:107927692"
ORIGIN      
        1 masdsslksy hgketvvssg rsstdgdtnn icvqtgeefs teflrhtgal rriavtmdad
       61 hsqprqagfs nnqncwqvyk dlkgspesrr keseygsnvp nfvpglgcia evdsyhdhfg
      121 rynwqiggfd gqkfvqhsda syidqltprl tvspvcvves pqsgrsnsag vtegtfaskm
      181 kflcsfggri lprpndgklr yvggetriis ikknltweel arkttaicnq phtikyqlpg
      241 edldalisvc sdedlhhmie eyhelerngg yqrlrlflvp lkeherhnsl egrstprqhd
      301 idyqyvfavn gmldtsgqhl asqtnqfgna sdyshsfhid sptsahafdh kdytpsspnt
      361 armfshptak flpnlhipsk sfnhspplsp vqgnqgnptk snlqfkvdts cfdhsnegin
      421 rfvmgthpgg nsyymdatgy hsnhphvplp lvnhqnhnqh llesilsnks rekhfhnrsp
      481 sgefshqrlh hqnmtgpdqt nlmeralsds qlqghderyn sllkgvlpqa qcnspreksl
      541 slalyndssn lemytrrnfe vashnssitd knvpsatplt edlassadsl fslpvivapn
      601 sadmmdllpg yqsntrkpel hitnqsttrd gqcamtelvs sqpvahgssk lqpvtphnlv
      661 dkepsisvsn lttdsassrq afrhgaeaan cpnhksaevt dtlylyersn fedmtsvqsq
      721 psvdpydckv iesaviiedv tsntpadips sstvvphiqh vtsgetqtar gskeekkstr
      781 kdkksgrkta dgsiidakkv eieagihglq iiknadieel qelgsgtfgt vyyakwrgte
      841 vavkrikegc fsgrpseqer ltnefwreaq ivsklhhpnv vsfygvvtdg pggtmatvte
      901 ymvngslrna llkkdraldr rrkvvlalda afgmeylhsk nivhfdlkcd nllinlkdsq
      961 rpickvgdfg lsrikrntlv sggvrgtlpw mapellngss trvsekvdvf sfgialweil
     1021 tgeepyarmh cgaiiggivn ntlrppiper cdpewrklme ecwlfepasr psfteitnrl
     1081 rqmsaalqpk rrtpir
//
LOCUS       XP_016714303             431 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamine synthetase leaf isozyme, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016714303
VERSION     XP_016714303.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858814.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..431
                     /product="glutamine synthetase leaf isozyme,
                     chloroplastic"
                     /calculated_mol_wt=47264
     Region          1..431
                     /region_name="PLN03036"
                     /note="glutamine synthetase; Provisional"
                     /db_xref="CDD:178603"
     CDS             1..431
                     /gene="LOC107927707"
                     /coded_by="XM_016858814.2:351..1646"
                     /db_xref="GeneID:107927707"
ORIGIN      
        1 maqllapstq wqmtlpktst ygspiatkmw sslvlkqnkk gaakssgkfk vvalsenstv
       61 nrlenllnmd vtpytdkiia eyvwiggsgl dmrsksrtis kpvkhpselp kwnydgsstg
      121 qapgedsevi lypqaifkdp frggnnilvi cdaytpagep iptnkrhraa eifsnkkvvd
      181 evpwfgieqe ytllqqnvkw plgwpvggyp gpqgpyycaa gadksfgrdi sdahykacly
      241 aginisgtng evmpgqweyq vgpsvgieag dhiwcsryil eriteqagvv lsldpkpieg
      301 dwngagchtn ystksmredg gfevikkail nlslrhkehi saygegnerr ltgkhetasi
      361 ntfswgvanr gcsirvgrdt ekngkgyled rrpasnmdpy vvtallaett llyeptleae
      421 alaaqkialn v
//
LOCUS       XP_016714304             408 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and MATH domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016714304
VERSION     XP_016714304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858815.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..408
                     /product="BTB/POZ and MATH domain-containing protein 2"
                     /calculated_mol_wt=44917
     Region          35..168
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(89,139..141)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          190..310
                     /region_name="BTB_POZ_BPM_plant"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in plant
                     BTB/POZ-MATH (BPM) protein family; cd18280"
                     /db_xref="CDD:349589"
     Region          310..373
                     /region_name="BACK_AtBPM-like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     plant BTB/POZ-MATH (BPM) protein family; cd14736"
                     /db_xref="CDD:350516"
     CDS             1..408
                     /gene="LOC107927709"
                     /coded_by="XM_016858815.2:735..1961"
                     /db_xref="GeneID:107927709"
ORIGIN      
        1 mgtisfhgel pkpstssspt ssstsstsrt etvngshefk ikgyslakgm gvgkymasda
       61 fmvggyewai yfypdgksae dnatyvslfi alasegtdvr alfeltlldq sgkdrhkvhs
      121 hfgrmlesgp ytlkyrgsmw gykrffkrtl lgtsdylkdd clsirccvgv vkshtegpki
      181 ysitvppsdi gqhfgklles gkgadvkfev dgeifdahkl vlaarspvfr aqlfgplkdq
      241 ntqsirvedm eapvfkallh fiywdalpdm eelmgstskw astlvaqhll aaadryaler
      301 mrllceaklc egvtintvat tlalaeqhnc lhlkgvclkf ialpenlkav mqtdgfeylk
      361 escpgvltel lqyvakigeh sviscgyrke gsldgsdvng rrvkprlq
//
LOCUS       XP_016714247             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714247
VERSION     XP_016714247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858758.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..117
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13072
     CDS             1..117
                     /gene="LOC107927649"
                     /coded_by="XM_016858758.2:54..407"
                     /db_xref="GeneID:107927649"
ORIGIN      
        1 msenqkpqsh qnlpsspnks ipeiesnaas dfsghqrvrf pnppdltnpd pstlrdqwry
       61 airqysrwys hawgtailag vsffalgwvi kgsnplpsfn sdknkndsdt nkndnsk
//
LOCUS       XP_016714248             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714248
VERSION     XP_016714248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858759.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..117
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13072
     CDS             1..117
                     /gene="LOC107927649"
                     /coded_by="XM_016858759.2:54..407"
                     /db_xref="GeneID:107927649"
ORIGIN      
        1 msenqkpqsh qnlpsspnks ipeiesnaas dfsghqrvrf pnppdltnpd pstlrdqwry
       61 airqysrwys hawgtailag vsffalgwvi kgsnplpsfn sdknkndsdt nkndnsk
//
LOCUS       XP_016714313             182 aa            linear   PLN 06-AUG-2024
DEFINITION  anther-specific protein LAT52 [Gossypium hirsutum].
ACCESSION   XP_016714313
VERSION     XP_016714313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858824.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..182
                     /product="anther-specific protein LAT52"
                     /calculated_mol_wt=20052
     Region          42..124
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..182
                     /gene="LOC107927719"
                     /coded_by="XM_016858824.2:51..599"
                     /db_xref="GeneID:107927719"
ORIGIN      
        1 makasvisll slficifssl sfayasapap apssnqqmrf evlghvycdt crvefetsis
       61 epipgatvrl ecrnrtdeki tyqspeitag dkgnykiqvt gdyeesdcdv mlvkspradc
      121 ndpteewrka rvvlttldgv sgeirfannl gfkkkealpe ctkvltemgy felqkelgse
      181 av
//
LOCUS       XP_016714314             182 aa            linear   PLN 06-AUG-2024
DEFINITION  anther-specific protein LAT52 [Gossypium hirsutum].
ACCESSION   XP_016714314
VERSION     XP_016714314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858825.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..182
                     /product="anther-specific protein LAT52"
                     /calculated_mol_wt=20052
     Region          42..124
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..182
                     /gene="LOC107927719"
                     /coded_by="XM_016858825.2:51..599"
                     /db_xref="GeneID:107927719"
ORIGIN      
        1 makasvisll slficifssl sfayasapap apssnqqmrf evlghvycdt crvefetsis
       61 epipgatvrl ecrnrtdeki tyqspeitag dkgnykiqvt gdyeesdcdv mlvkspradc
      121 ndpteewrka rvvlttldgv sgeirfannl gfkkkealpe ctkvltemgy felqkelgse
      181 av
//
LOCUS       XP_040944024             755 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BLISTER isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944024
VERSION     XP_040944024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088090.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..755
                     /product="protein BLISTER isoform X1"
                     /calculated_mol_wt=82588
     Region          <404..>571
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <434..741
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..755
                     /gene="LOC107927753"
                     /coded_by="XM_041088090.1:396..2663"
                     /db_xref="GeneID:107927753"
ORIGIN      
        1 masaqalpss rkqehleagk rrleefrkkk aaekakkaap tsqtnvsdvs lnekqqlete
       61 hvqvidsgga atsdgpnlss vkiinnnkat evksnnkhaf psslannyns sstevhihak
      121 sqenekcgas wnagrlynds lqaehmsndf qeprskeddg yskvstvlnp issenfvski
      181 spqnslqska segsllgssh alsslfedsa qstsggrgsi levgqnlqgt gdfkepmisd
      241 fgegkfssss ggfpslhvps iqtsgssefs fdarssssht plhsvandts srrsrpsfld
      301 slnvsgassg slfqhnqptk evfasqssqf ntsntmgssp ferpsteign agtysklgfs
      361 dfpsgneysg yfsapassng dlsklivane nilekkhdfy stkqnedfaa leqhiedltq
      421 ekfslqrale asrtlaesla aenssltgsy nqqrsavnrl ksdmeslqee ikaqlaeles
      481 fkmeyanarl ecnaaderan ilasevigle ekalrlrsne lklerqlens qaeissfkkk
      541 msslekdrqd llstiealqe ekkvlqskvr dsflsgksvd aiknpaskkd mststedlat
      601 tettsddkel nnsndassls llpedggfev ssvhippdqi rmvqninsli selrlekeel
      661 tqalsselsq ssklkevnee lsrklevqtq rlelltaqsl aseyiparqp eprkiddntp
      721 yadegdevve rvlgwimklf pggpsrqrtn krlsy
//
LOCUS       XP_016714342             755 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BLISTER isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714342
VERSION     XP_016714342.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858853.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714342.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..755
                     /product="protein BLISTER isoform X1"
                     /calculated_mol_wt=82588
     Region          <404..>571
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <434..741
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..755
                     /gene="LOC107927753"
                     /coded_by="XM_016858853.2:396..2663"
                     /db_xref="GeneID:107927753"
ORIGIN      
        1 masaqalpss rkqehleagk rrleefrkkk aaekakkaap tsqtnvsdvs lnekqqlete
       61 hvqvidsgga atsdgpnlss vkiinnnkat evksnnkhaf psslannyns sstevhihak
      121 sqenekcgas wnagrlynds lqaehmsndf qeprskeddg yskvstvlnp issenfvski
      181 spqnslqska segsllgssh alsslfedsa qstsggrgsi levgqnlqgt gdfkepmisd
      241 fgegkfssss ggfpslhvps iqtsgssefs fdarssssht plhsvandts srrsrpsfld
      301 slnvsgassg slfqhnqptk evfasqssqf ntsntmgssp ferpsteign agtysklgfs
      361 dfpsgneysg yfsapassng dlsklivane nilekkhdfy stkqnedfaa leqhiedltq
      421 ekfslqrale asrtlaesla aenssltgsy nqqrsavnrl ksdmeslqee ikaqlaeles
      481 fkmeyanarl ecnaaderan ilasevigle ekalrlrsne lklerqlens qaeissfkkk
      541 msslekdrqd llstiealqe ekkvlqskvr dsflsgksvd aiknpaskkd mststedlat
      601 tettsddkel nnsndassls llpedggfev ssvhippdqi rmvqninsli selrlekeel
      661 tqalsselsq ssklkevnee lsrklevqtq rlelltaqsl aseyiparqp eprkiddntp
      721 yadegdevve rvlgwimklf pggpsrqrtn krlsy
//
LOCUS       XP_016714344             709 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BLISTER isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714344
VERSION     XP_016714344.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858855.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714344.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..709
                     /product="protein BLISTER isoform X2"
                     /calculated_mol_wt=77898
     Region          <358..>525
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <388..695
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..709
                     /gene="LOC107927753"
                     /coded_by="XM_016858855.2:396..2525"
                     /db_xref="GeneID:107927753"
ORIGIN      
        1 masaqalpss rkqehleagk rrleefrkkk aaekakkaap tsqtnvsdvs lnekqqlete
       61 hvqvidsevh ihaksqenek cgaswnagrl yndslqaehm sndfqeprsk eddgyskvst
      121 vlnpissenf vskispqnsl qskasegsll gsshalsslf edsaqstsgg rgsilevgqn
      181 lqgtgdfkep misdfgegkf ssssggfpsl hvpsiqtsgs sefsfdarss sshtplhsva
      241 ndtssrrsrp sfldslnvsg assgslfqhn qptkevfasq ssqfntsntm gsspferpst
      301 eignagtysk lgfsdfpsgn eysgyfsapa ssngdlskli vanenilekk hdfystkqne
      361 dfaaleqhie dltqekfslq raleasrtla eslaaenssl tgsynqqrsa vnrlksdmes
      421 lqeeikaqla elesfkmeya narlecnaad eranilasev igleekalrl rsnelklerq
      481 lensqaeiss fkkkmsslek drqdllstie alqeekkvlq skvrdsflsg ksvdaiknpa
      541 skkdmstste dlattettsd dkelnnsnda sslsllpedg gfevssvhip pdqirmvqni
      601 nsliselrle keeltqalss elsqssklke vneelsrkle vqtqrlellt aqslaseyip
      661 arqpeprkid dntpyadegd evvervlgwi mklfpggpsr qrtnkrlsy
//
LOCUS       XP_040944025             692 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944025
VERSION     XP_040944025.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088091.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=79202
     Region          410..456
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          579..625
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..692
                     /gene="LOC107927621"
                     /coded_by="XM_041088091.1:128..2206"
                     /db_xref="GeneID:107927621"
ORIGIN      
        1 mdvsecesrt eeetmelqhf shphplvffk yqtvaskevd peaarcfgce npleggsygc
       61 nqckfylhkg caelelvpri qhpfhpqhpl tffpqspylg eyvcglcggi fwgfvyhcgs
      121 clfdlhinca llessiatnf pnslhhhplh fiqnhneeve rdcsgcqtpl sgpiyhcfdc
      181 syptfftlhk kcveeqplei nhscdrkhpl tllpqrpahp ekcncylcki qwngfvyscs
      241 lcnfelsvdd ivspptitna shehpwmlis kkmsficdfc givgdhspyl catcnlvvhk
      301 ncislprnir itqhchvicf sysfqqnqve dcmckicqte vdtsygrycc sasgcdyiah
      361 ahcatnksiw dgtiikegyd ekhgpsnlit dvfeqisiee imvaskikhs yhhhnlrltf
      421 sgeikddsqc dgcmrpisnp fysceqckff lhkncaelsk emghpfhkha ltltnsrtlv
      481 eysicnacsh wyqgfsyrcy rrgcslnfdi rcmlmlntln hpshdhslfl ehnrkrdcsa
      541 csgtmepwsv ayrcmkrcdy tldvgcstlp ltasykydkh pltltysdes easqlycdlc
      601 ekerqpnswf yycadcdnsl hlncalgdlp ymklgnkikg tphrhpltvv kniwncppcv
      661 ecrelcngqa lecketgcnf tvhwdccwgl tf
//
LOCUS       XP_040944026             191 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944026
VERSION     XP_040944026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088092.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..191
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=21742
     CDS             1..191
                     /gene="LOC107927621"
                     /coded_by="XM_041088092.1:141..716"
                     /db_xref="GeneID:107927621"
ORIGIN      
        1 mdvsecesrt eeetmelqhf shphplvffk yqtvaskevd peaarcfgce npleggsygc
       61 nqwcslkclt qacslgklsa lmnftapnts smgaipktrv faemldpsmq aweaivfnkl
      121 ishhlfhrrq hmnnhsknki syanlvatke lfvsktmfln rpqnfivvld clllffaeft
      181 kefphwlslq t
//
LOCUS       XP_016714334             693 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714334
VERSION     XP_016714334.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858845.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..693
                     /product="uncharacterized protein"
                     /calculated_mol_wt=79816
     Region          20..72
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          83..130
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          143..192
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          312..363
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          414..461
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          470..517
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          527..573
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          586..631
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..693
                     /gene="LOC107927744"
                     /coded_by="XM_016858845.2:1134..3215"
                     /db_xref="GeneID:107927744"
ORIGIN      
        1 mdvsecesrt egeamelqhf shphplvsfk yqivareevd peaafclgce kpvegwsygc
       61 nqcefylhkg caevelapki qhpfhpkhpl tllpkspypg egicdlcgkk fggfvyncnd
      121 csfdlhinca llqssiaanf pnslhphplf fiqnhnneve phcsgcqkpi sgpiyhcsdc
      181 typifnlhke caelpleinh pcdrkhpltl lpqppthpqk cscslcriqw kgfvyscslc
      241 nfdlslddfl fspptitvas hehpwmlvsr kmsfvcdfcg tdgdhtpyfc atchllvhkn
      301 cislprhimm trhrhtitll ysfrqnqved wmckicyeev disyghyscp asrcryiahv
      361 rcatdkaiwg gtimlegyde gseevvdesw nlitdvveqi rigelmvase ikhsyhdhnl
      421 rltfsgktkd ddsqcdgctr pistpfysce qckfflhkdc aelpkemphp fhkhlltlsn
      481 shneygyswc nacrrqyqgf ryrcyegdcs feidiqcmll sdtlkhpshe hslflvhnne
      541 gtrcsacfer lyswdvayrc mkrcdfsldv gcatlpltaw ykydrhpltl tysddsepsq
      601 fycdlceker epndwfyyca dcdnslhlnc aigdlpylkr gnklkeyshe hlftvvkniw
      661 ncppcmvcge vcngqaleck esecnftvhw dcr
//
LOCUS       XP_040944027             602 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944027
VERSION     XP_040944027.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088093.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..602
                     /product="uncharacterized protein"
                     /calculated_mol_wt=69370
     Region          44..93
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          161..203
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          315..362
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          428..474
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          487..532
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..602
                     /gene="LOC107927742"
                     /coded_by="XM_041088093.1:2948..4756"
                     /db_xref="GeneID:107927742"
ORIGIN      
        1 msgicdlcgk kfggfvyncs dcsfdlhinc allqssiaan fpnslhphpl ffiqnhnnei
       61 ephcsgcqkp isgpiyhcsd ctytifnlhk ecaelplein hpydrkhplt llpqppthpq
      121 kcscylcriq wkgfvyscsl cnfdlslddf lfspptitva shehpwmlvs rkmsfvcdfc
      181 gtdgdhspyh cdtcvlfvhk ncislprhim itrhshtisl syslrqiqve dwmckicyte
      241 vdinyghycc pasccryiah vrcatdkaiw dgrimlegyd erseevvdep wnlitdvveq
      301 irigelmvas eikhsyhdhn lrltfsgktk dddsqcdgci rpistpfysc eqckfflhkd
      361 caelpkemph pfhkhlltls nsddeygysq cdacgcvyqg fryrcyegdc sfqidiqcml
      421 lsdtlkhpsh ehslflfhdk egtscsacfr elpswdvayr cmrrcdfsld vgcatlplta
      481 wykydrhpli ltysddseps qfycdlceke repndwfyyc adcdnslhln caigdlpymk
      541 lgnklkdysh ehlltvvkni wncppcivcg evcngqalec kesecnftvh wyclwnlpea
      601 fe
//
LOCUS       XP_040944029             602 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944029
VERSION     XP_040944029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088095.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..602
                     /product="uncharacterized protein"
                     /calculated_mol_wt=69370
     Region          44..93
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          161..203
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          315..362
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          428..474
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          487..532
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..602
                     /gene="LOC107927742"
                     /coded_by="XM_041088095.1:1385..3193"
                     /db_xref="GeneID:107927742"
ORIGIN      
        1 msgicdlcgk kfggfvyncs dcsfdlhinc allqssiaan fpnslhphpl ffiqnhnnei
       61 ephcsgcqkp isgpiyhcsd ctytifnlhk ecaelplein hpydrkhplt llpqppthpq
      121 kcscylcriq wkgfvyscsl cnfdlslddf lfspptitva shehpwmlvs rkmsfvcdfc
      181 gtdgdhspyh cdtcvlfvhk ncislprhim itrhshtisl syslrqiqve dwmckicyte
      241 vdinyghycc pasccryiah vrcatdkaiw dgrimlegyd erseevvdep wnlitdvveq
      301 irigelmvas eikhsyhdhn lrltfsgktk dddsqcdgci rpistpfysc eqckfflhkd
      361 caelpkemph pfhkhlltls nsddeygysq cdacgcvyqg fryrcyegdc sfqidiqcml
      421 lsdtlkhpsh ehslflfhdk egtscsacfr elpswdvayr cmrrcdfsld vgcatlplta
      481 wykydrhpli ltysddseps qfycdlceke repndwfyyc adcdnslhln caigdlpymk
      541 lgnklkdysh ehlltvvkni wncppcivcg evcngqalec kesecnftvh wyclwnlpea
      601 fe
//
LOCUS       XP_040944030             602 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944030
VERSION     XP_040944030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088096.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..602
                     /product="uncharacterized protein"
                     /calculated_mol_wt=69370
     Region          44..93
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          161..203
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          315..362
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          428..474
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          487..532
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..602
                     /gene="LOC107927742"
                     /coded_by="XM_041088096.1:3041..4849"
                     /db_xref="GeneID:107927742"
ORIGIN      
        1 msgicdlcgk kfggfvyncs dcsfdlhinc allqssiaan fpnslhphpl ffiqnhnnei
       61 ephcsgcqkp isgpiyhcsd ctytifnlhk ecaelplein hpydrkhplt llpqppthpq
      121 kcscylcriq wkgfvyscsl cnfdlslddf lfspptitva shehpwmlvs rkmsfvcdfc
      181 gtdgdhspyh cdtcvlfvhk ncislprhim itrhshtisl syslrqiqve dwmckicyte
      241 vdinyghycc pasccryiah vrcatdkaiw dgrimlegyd erseevvdep wnlitdvveq
      301 irigelmvas eikhsyhdhn lrltfsgktk dddsqcdgci rpistpfysc eqckfflhkd
      361 caelpkemph pfhkhlltls nsddeygysq cdacgcvyqg fryrcyegdc sfqidiqcml
      421 lsdtlkhpsh ehslflfhdk egtscsacfr elpswdvayr cmrrcdfsld vgcatlplta
      481 wykydrhpli ltysddseps qfycdlceke repndwfyyc adcdnslhln caigdlpymk
      541 lgnklkdysh ehlltvvkni wncppcivcg evcngqalec kesecnftvh wyclwnlpea
      601 fe
//
LOCUS       XP_016714332             429 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714332
VERSION     XP_016714332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858843.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..429
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49331
     Region          144..190
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          256..302
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          314..360
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..429
                     /gene="LOC107927740"
                     /coded_by="XM_016858843.2:1271..2560"
                     /db_xref="GeneID:107927740"
ORIGIN      
        1 mliskkmsfi cdfcgivgdh spylcatcnl vvhkncislp rniritrhyh vicfsysfqq
       61 nqvedcmcri cftevdtsyg ryccsasgcd yiahahcatn ksiwdgtiik egyderhgps
      121 nlitdvieqi sieeimvask ikhsyhhhnl rltfsgeikd dsqcdgcmrp isnpfysceq
      181 ckfflhkdca elrkemphpf hkhlltlsns hdeygysvcg acgrlyqgfs yrcykgdccf
      241 efdiqcmlls dtlkhpshkh plflvhnnkg tscsacfrkl hsrdvayrcm krcdfsldvg
      301 catlpltawy kydrhpltlt fsddsepsql ycdlceekrk pnrwfyycad cddslhlnca
      361 vgglpymkig nrikgtghrh pltvvkniwn cppckvcgev cngqalecke secnftvhry
      421 cewdlqwii
//
LOCUS       XP_016714269             247 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione S-transferase U7 [Gossypium hirsutum].
ACCESSION   XP_016714269
VERSION     XP_016714269.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858780.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..247
                     /product="glutathione S-transferase U7"
                     /calculated_mol_wt=28988
     Region          29..218
                     /region_name="GstA"
                     /note="Glutathione S-transferase [Posttranslational
                     modification, protein turnover, chaperones]; COG0625"
                     /db_xref="CDD:440390"
     CDS             1..247
                     /gene="LOC107927671"
                     /coded_by="XM_016858780.2:7..750"
                     /db_xref="GeneID:107927671"
ORIGIN      
        1 mqrlkiafkl tknnqtrdqt shtmddevkl fgfwaspfsl rviwalklkg vdyeyieedi
       61 phnkselllk ynpvykkipv lvhggkpiae slvileyide vwphspllpk dayersvarf
      121 wakfidekir pmweffhkfg eeqqkaienn fkilrtieeh glgdkkffgg dqigiadlvf
      181 gmvihyfapm edvmgvkfik vdtfprlhaw mrhfsehpvi kdnvpdysrv vdylkgyldi
      241 inrmqkg
//
LOCUS       XP_016714226             170 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAIN-LIKE 2-like [Gossypium hirsutum].
ACCESSION   XP_016714226
VERSION     XP_016714226.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858737.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..170
                     /product="protein MAIN-LIKE 2-like"
                     /calculated_mol_wt=19299
     Region          50..>150
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..170
                     /gene="LOC107927623"
                     /coded_by="XM_016858737.2:46..558"
                     /db_xref="GeneID:107927623"
ORIGIN      
        1 mdlnpnivln dndhiasimh kdlyrivrpr lydpgyfpdq rvipylnvag fgvaayiqts
       61 elradlisal vkrwrpetht fhlpcgevsi tlqdvavqlg lsingeavtg lgkvrdpwgt
      121 cerllgrvpp snvderltyi kfswlkenfe hlpsikkknt isvfrklyni
//
LOCUS       XP_040944031             145 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_040944031
VERSION     XP_040944031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088097.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..145
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=17177
     Region          4..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          88..>142
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
     Site            order(95..96,99..100,103,132)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198286"
     CDS             1..145
                     /gene="LOC121214442"
                     /coded_by="XM_041088097.1:302..739"
                     /db_xref="GeneID:121214442"
ORIGIN      
        1 mdevklfgfw aspfsrrviw alklkgveye yieenlpynk sdlllqynpv hkkipvlvhg
       61 gkpiaeslvi leyidevwph npllpkdaye rsvarfwakf ieektqpmwe ffrkfgeeqq
      121 kaiennfeil rtikehgled kkski
//
LOCUS       XP_016714306             223 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714306
VERSION     XP_016714306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858817.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25578
     Region          4..77
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..211
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,154..155,158,200)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(101,105,108..109,111..112,159,162,206,209)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..223
                     /gene="LOC107927711"
                     /coded_by="XM_016858817.2:20..691"
                     /db_xref="GeneID:107927711"
ORIGIN      
        1 mavvklfgaf fspyafrviw alklkgipye yidedlrnks plllqynpih kkvpvlihdg
       61 kpicestvil qyideiwpqt pllpadpydr avalfwikfa ddkgylmlkl yqangeeqqa
      121 avkewlemle vmeehaligv kklfggdein mvdiafsfva iwlgvledil gleicephkf
      181 prvsswiqnf ksipvikdnf pdtdkmstfl khgremmlts ksn
//
LOCUS       XP_040944032             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944032
VERSION     XP_040944032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088098.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24554
     Region          9..56
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          124..170
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..211
                     /gene="LOC121214444"
                     /coded_by="XM_041088098.1:126..761"
                     /db_xref="GeneID:121214444"
ORIGIN      
        1 mvaskikhsy hdhnlrltls gktndddsqc dgctrpistp fysceqcnff ihkdcaelpk
       61 emphpfhkhl ltlsnshdey gysycvacrr ryqgfgyrcy krgdcfyfgf diqcmllsdt
      121 lkhpshehsl flvhnnegvs csacfqklfs wevayrcmkr cnfsldvgca tlpltawykh
      181 drhpltltfs ddsepsqlyc dlcekrrkpn r
//
LOCUS       XP_016714270             678 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714270
VERSION     XP_016714270.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858781.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714270.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..678
                     /product="uncharacterized protein"
                     /calculated_mol_wt=78377
     Region          6..53
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          64..111
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          124..173
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          293..344
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          395..442
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          508..553
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          565..611
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..678
                     /gene="LOC107927672"
                     /coded_by="XM_016858781.2:407..2443"
                     /db_xref="GeneID:107927672"
ORIGIN      
        1 meiqhfghhh plvfiqahsv askaalclvc ekpvegwsyg cnqcefylhk gcaelelapk
       61 iqhpfhpkhp ltllpkspys glgicnfcrk kfggfvyncn dcsfdlhinc allqssiaan
      121 fpnslhphpl lfiqnhnnev kshcsgcqkp isgqiyhcsd ctypyfnlhk ecaelplein
      181 hpydrrhplt llpqppthpp kcscylcriq wkgfvyscsl cnfdlslddf lfssptitva
      241 shehpwmlvs rkmsfvcdfc gtdgdhtpyf saichllvhk ncislprhim itrhrhtisl
      301 syslrqnqve dwmckicyee vdirygnyrc pasrcryiah vrcatdkaiw dgtimpegyd
      361 erseevvdep wnlitdvveq irigelmvas eikhsyhdhn lrltfsgktk dddshcdgct
      421 rpistpfysc eqcrfflhkd caelpkemph pfhkhlltls nshdeygysy cvacrrryqg
      481 fgyrcykrdc rfgidiqcml lsdtlkhpsh ehslvlvhne gtscsacfry llsmdvayrc
      541 mkrcdfsldv gcaslpltaw ykydrhaltl tfsddsepsq lycdlceker epnrwfyyca
      601 dcdnslhlnc aigdlpymkl gnkfktdwhk hpftvvkniw ncppckvcge vcngqaleck
      661 esecnftvhw nclwdlre
//
LOCUS       XP_040944033             465 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944033
VERSION     XP_040944033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088099.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..465
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53853
     Region          6..53
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          64..111
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          124..173
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          273..324
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          375..422
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..465
                     /gene="LOC121214445"
                     /coded_by="XM_041088099.1:461..1858"
                     /db_xref="GeneID:121214445"
ORIGIN      
        1 meiqhfghhh plvfiqahsv askaalclvc ekpvvgwsyg cnqcefylhr gcaelelapk
       61 iqhpfhpkhp ltllpkssys gfgicnfclk klggffyncn dcsfylhinc allqssiaan
      121 fpnslhphpl ffiqnhnnev kshcsgcqkp isgqiyhcsd ctyayfnlhk ecaelplein
      181 hpydrrhplt llpqppthpp kcscylcriq wkgfvyscsl cnfdlslddf pfssptitva
      241 shehpwmlvs rkmsfvcdfc ncislprhim itrhrhtisl syslrqnqve dwmckicyee
      301 vdiryghyrc pasrcryiah vrcatdkaiw dgtimpegyd erseevvdep wnlitdvveq
      361 irigelmvas eikhsyhdhn lrltfsgktk dddsecdgct rpistpfysc eqcrfflhkd
      421 caelpkemph pfhrhlltls nshdrngysv crayrryyqg yrytc
//
LOCUS       XP_016714404             236 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714404
VERSION     XP_016714404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..236
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=27703
     Region          4..194
                     /region_name="GstA"
                     /note="Glutathione S-transferase [Posttranslational
                     modification, protein turnover, chaperones]; COG0625"
                     /db_xref="CDD:440390"
     CDS             1..236
                     /gene="LOC107927800"
                     /coded_by="XM_016858915.2:35..745"
                     /db_xref="GeneID:107927800"
ORIGIN      
        1 mdelklfgfw pspysrrviw alklkgvdye yieedlpfnk selllqynpv hkkipvlvhg
       61 gkpiaeslvi leyidevwph npllpkdaye kseamfwakf identgpmwg ffqkfgeeqq
      121 kaiesyseil rkieehglrd kkffggdqig iadlvfgmvi hmlapmeevv gykfikadsf
      181 prlhawvkhf sehpvikdnv pdytkvvdfl kirrefyrns qqnsekkerk kvlliv
//
LOCUS       XP_016714251             225 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714251
VERSION     XP_016714251.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858762.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=26387
     Region          4..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Region          5..195
                     /region_name="GstA"
                     /note="Glutathione S-transferase [Posttranslational
                     modification, protein turnover, chaperones]; COG0625"
                     /db_xref="CDD:440390"
     Site            order(12,14,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     CDS             1..225
                     /gene="LOC107927652"
                     /coded_by="XM_016858762.2:35..712"
                     /db_xref="GeneID:107927652"
ORIGIN      
        1 mdevklfgfw aspfsrrviw alklkgveye yieedlpynk sdlllqynpv hkkipvlvhg
       61 gkpiaeslvi leyidevwph npllpkdaye rsvarfwakf iqektqpmwe ffakhgeeqq
      121 kaiednyeil rtieehglgd kkffggdqig vadlvfgmvi hmlapmeevv ggvkfikads
      181 fprlhawvrh fsehpvikdn vpdytrivdf lekrrelywk sqhnh
//
LOCUS       XP_016714405             224 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714405
VERSION     XP_016714405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=26082
     Region          4..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          88..212
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(89,91,95,103)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(95,102,155..156,159,201)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(102,106,109..110,112..113,160,163,207,210)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..224
                     /gene="LOC107927802"
                     /coded_by="XM_016858916.2:28..702"
                     /db_xref="GeneID:107927802"
ORIGIN      
        1 mdevklfgfw aspfsrrviw alklkgveye yieedlpynk sdlllqynpv hkkipvlvhg
       61 gkpiaeslvi leyidevwph npllpkdaye rsvarfwakf ieekshliak lyrtdgeeqq
      121 eaakeyfeml evleehalir gkkffggdei nmvdiafcsv ahwlrvvevf agpkifephk
      181 fprlnswiqn lksvpvikdn lpdtdkmlal lkrwremlla skss
//
LOCUS       XP_016714224             224 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714224
VERSION     XP_016714224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858735.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=26362
     Region          4..78
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Region          5..194
                     /region_name="GstA"
                     /note="Glutathione S-transferase [Posttranslational
                     modification, protein turnover, chaperones]; COG0625"
                     /db_xref="CDD:440390"
     Site            order(12,14,40,53..54,66..67)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,72)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(62..63,66,72,76)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     CDS             1..224
                     /gene="LOC107927622"
                     /coded_by="XM_016858735.2:46..720"
                     /db_xref="GeneID:107927622"
ORIGIN      
        1 mdevklfgfw aspfsrrviw alklkgveye yieenlpynk sdlllqynpv hkkipvlvhg
       61 gkpiaeslvi leyidevwph npllpkdaye rsvarfwakf ieektqpmwe ffrkfgeeqq
      121 kaiennyeil rtieehglgd kkffggdqig iadlvfgmii hmlapmeevv gykfikddsf
      181 prlhawvkhf sehpvikdnv pdytkvvdfl kiirefyrns qqns
//
LOCUS       XP_016714243             223 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714243
VERSION     XP_016714243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25502
     Region          4..77
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..211
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,154..155,158,200)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(101,105,108..109,111..112,159,162,206,209)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..223
                     /gene="LOC107927646"
                     /coded_by="XM_016858754.2:37..708"
                     /db_xref="GeneID:107927646"
ORIGIN      
        1 mavvkllgtw fspyghrviw alklkgilye yieedvrnks psllqynpih kqvpvlvhgg
       61 kpicestvil qyideiwpqn pllpadpydr avalfwikfa ddkgllmskl yrgngeeqqa
      121 avkewlemle vmeehaligv kkffggdein mvdiafsfva hwlgiledvl gleifkphkf
      181 prvsswiqnf ksspiikdnl pdadkmstfl krgremmlts ksn
//
LOCUS       XP_016714261             223 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714261
VERSION     XP_016714261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858772.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25532
     Region          4..76
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..213
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,154..155,158,200)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(101,104..105,108..109,111..112,159,162,206,209,213)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..223
                     /gene="LOC107927662"
                     /coded_by="XM_016858772.2:143..814"
                     /db_xref="GeneID:107927662"
ORIGIN      
        1 mavvklfgaw lspycyrviw alklkgiaye yieedlsnks plllqynpih kkipvllhdd
       61 kpicestvil ryideirpqn pllpadpher avalfwikfa ddkspliskl frtdgeeqqa
      121 vakecfemle vleehaligg kkffggdein mvdiafcsva hwlgviedfa glkifephkf
      181 prlnswiqnf ksvpvikdnl pdtdkmlvll krrreillas kss
//
LOCUS       XP_040944034             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944034
VERSION     XP_040944034.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088100.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..183
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21023
     Region          10..56
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          68..114
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..183
                     /gene="LOC121214447"
                     /coded_by="XM_041088100.1:133..684"
                     /db_xref="GeneID:121214447"
ORIGIN      
        1 mllsdtlkhp shehslvlvh nnegtscsac frnllsmdva yrcmkrcdfs lavgcaslpl
       61 tawykydrha ltltfsddse psqlycglce kerepnrwfy ycadcdnslh lncaigdlpy
      121 mklgnkfkth whkhpftvvk niwncppckv cgevcngqal eckesecnft vhwnchrrll
      181 rii
//
LOCUS       XP_016714259             223 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714259
VERSION     XP_016714259.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714259.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25619
     Region          4..77
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..211
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,154..155,158,200)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(101,105,108..109,111..112,159,162,206,209)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..223
                     /gene="LOC107927661"
                     /coded_by="XM_016858770.2:38..709"
                     /db_xref="GeneID:107927661"
ORIGIN      
        1 mavvklfgsf fspygyrviw alklkgipye yidedlrnks plllqynpih kqvpvlvhdg
       61 kpicestvil qyideiwpqn pllpadpydr avalfwikfa ddkgylmlkl yrangeeqqa
      121 tvkewlemle vmeehalvgv kklfggdein mvdiafsfva iwlgvledil gleicephkf
      181 prvsswiqnf ksipvikdnf pdtdkmsafl khgremmlts kpn
//
LOCUS       XP_016714229             223 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714229
VERSION     XP_016714229.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858740.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=25678
     Region          4..77
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..213
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,154..155,158,200)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(101,104..105,108..109,111..112,159,162,206,209,213)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..223
                     /gene="LOC107927628"
                     /coded_by="XM_016858740.2:86..757"
                     /db_xref="GeneID:107927628"
ORIGIN      
        1 mavvklfgaw lspyvfrviw alklkgipye yieedlsnks plllqynpih kkvpvlvhdg
       61 kpicestvil ryideiwpqn pllpadpydr avalfwikfa ddkspiiakl yrtegeeqqv
      121 vvkewlemle ameehaligg kkffgrdein mvdiafcmva hwlgviedaa glkvfepykf
      181 prvsswiqnf ksvpvikdnl pdtdkivayl krrkemllts ksn
//
LOCUS       XP_016714230             222 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione transferase GST 23 [Gossypium hirsutum].
ACCESSION   XP_016714230
VERSION     XP_016714230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858741.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="glutathione transferase GST 23"
                     /calculated_mol_wt=25778
     Region          4..77
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..213
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,154..155,158,200)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(101,105,108..109,111..112,159,162,206,209,213)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198294"
     CDS             1..222
                     /gene="LOC107927630"
                     /coded_by="XM_016858741.2:110..778"
                     /db_xref="GeneID:107927630"
ORIGIN      
        1 mavvklfgtw lspyvyrviw alklkgipye yieedlskks plllqynpih kkipvllhdg
       61 kpicestvil ryideiwpqn pllpadpydr avalfwikfa ddkshllskl yrtedeeqea
      121 vvkewlemlk ameehaligg krffggdein mvdiafcmva hwlgliedfa glkifephkf
      181 prvsswiqnf ksvpvikdnl pdtdkmlgll khrremlrsk sn
//
LOCUS       XP_016714232             209 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glutathione S-transferase [Gossypium hirsutum].
ACCESSION   XP_016714232
VERSION     XP_016714232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858743.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="probable glutathione S-transferase"
                     /calculated_mol_wt=24107
     Region          4..77
                     /region_name="GST_N_Tau"
                     /note="GST_N family, Class Tau subfamily; GSTs are
                     cytosolic dimeric proteins involved in cellular
                     detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of endogenous and
                     xenobiotic alkylating agents, including carcinogens;
                     cd03058"
                     /db_xref="CDD:239356"
     Site            order(12,14,39,52..53,65..66)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239356"
     Site            order(17,24,71)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Site            order(61..62,65,71,75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239356"
     Region          87..199
                     /region_name="GST_C_Tau"
                     /note="C-terminal, alpha helical domain of Class Tau
                     Glutathione S-transferases; cd03185"
                     /db_xref="CDD:198294"
     Site            order(88,90,94,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     Site            order(94,101,149..150,188)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198294"
     CDS             1..209
                     /gene="LOC107927631"
                     /coded_by="XM_016858743.2:170..799"
                     /db_xref="GeneID:107927631"
ORIGIN      
        1 mgevklvgtw vspytyrikw alklkgiafd yieedlcsks alllqynpih kkvpvffhgg
       61 kpicesmvii eyieeiwphn pllptdpyer amlrfwikya edkgpsmwmv gegqhkaeqn
      121 slemlkiiee kalgdkkffg gdnismldiv lglghwlgge klleahklhr lhvwlknfkq
      181 vpvikedlld ldgmlaylrh qremspath
//
LOCUS       XP_016714228             193 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid-transfer protein Cor a 8.0101 [Gossypium
            hirsutum].
ACCESSION   XP_016714228
VERSION     XP_016714228.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858739.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714228.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="non-specific lipid-transfer protein Cor a
                     8.0101"
                     /calculated_mol_wt=20643
     Region          104..190
                     /region_name="nsLTP1"
                     /note="Non-specific lipid-transfer protein type 1 (nsLTP1)
                     subfamily; Plant nsLTPs are small, soluble proteins that
                     facilitate the transfer of fatty acids, phospholipids,
                     glycolipids, and steroids between membranes. In addition
                     to lipid transport and assembly; cd01960"
                     /db_xref="CDD:238926"
     Site            order(109,113,117,120,134,137..138,147,150,153..154,157,
                     168,171..172,179..181,183..184)
                     /site_type="active"
                     /note="hydrophobic cavity [active]"
                     /db_xref="CDD:238926"
     CDS             1..193
                     /gene="LOC107927626"
                     /coded_by="XM_016858739.2:33..614"
                     /db_xref="GeneID:107927626"
ORIGIN      
        1 mdyksdiedt lvikknckgl npkfnilegp kpqfhllssi vltlhlykpp slsplklitf
       61 qntspvtqks fivssienpm aalklvcalv lcmlvvepia ttaitcgdvt skvagclsyl
      121 qnggnvpkac cdgirslnmm arttpdrqtv cgclqtaaka vkikgnlaet lpakcsvnip
      181 ykiststnck nvk
//
LOCUS       XP_016714252             240 aa            linear   PLN 06-AUG-2024
DEFINITION  PHD finger protein ING1 [Gossypium hirsutum].
ACCESSION   XP_016714252
VERSION     XP_016714252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858763.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..240
                     /product="PHD finger protein ING1"
                     /calculated_mol_wt=26683
     Region          12..109
                     /region_name="ING_plant"
                     /note="Inhibitor of growth (ING) domain of plant inhibitor
                     of growth proteins; cd17015"
                     /db_xref="CDD:341097"
     Site            order(12,15..17,20,23,26,30,37,40..41,70..71,74,77..78,81,
                     84..85,88,91,94..95,98..99,101..102,105..106)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:341097"
     Region          186..231
                     /region_name="PHD_Yng1p_like"
                     /note="PHD finger found in yeast orthologs of ING tumor
                     suppressor family; cd15587"
                     /db_xref="CDD:277062"
     Site            order(186,196..201,208..209,212,220..221,223,225)
                     /site_type="other"
                     /note="H3K4me3 binding site [polypeptide binding]"
                     /db_xref="CDD:277062"
     CDS             1..240
                     /gene="LOC107927653"
                     /coded_by="XM_016858763.2:120..842"
                     /db_xref="GeneID:107927653"
ORIGIN      
        1 msffidefqa dlealpnilq kkyalmrdld kslqeivrqn eqrceqeied mkrglkagni
       61 tpdtsllrfs eealdeqkhs vriadekval aiqaydlvds hiqqldqylk ksgeelrrer
      121 entataspaq tpdgttksgr sgesgrggrk ktrlataaaa tevaasaanp tgveldlpvd
      181 pneptyclcn qvsygemvac dnpnckiewf hfgcvglkeq pkgkwycpdc atvknrrkgr
//
LOCUS       XP_040944035             434 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14A [Gossypium hirsutum].
ACCESSION   XP_040944035
VERSION     XP_040944035.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088101.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..434
                     /product="beta-glucuronosyltransferase GlcAT14A"
                     /calculated_mol_wt=48249
     Region          33..432
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..434
                     /gene="LOC107927771"
                     /coded_by="XM_041088101.1:314..1618"
                     /db_xref="GeneID:107927771"
ORIGIN      
        1 mhnnhqqtpp aspynsnaaa tttaskdnsk atvciilats ffsflfiial pstspirplt
       61 iirpdpalfp nrpislteip saptppsiay fisgsagdsa rilrvllasy hprnhyllhl
      121 dlsasqterd rlastiqaip ifkaaqnvdv vgksdyaypr gpsaisstlh gasillrlas
      181 dwnwfislna gdyplatqdd ilhilsylpk dlnfvnhtny igwkeskklk piivdtglyl
      241 lekeeifyat qkrelptafk lfsgssftml trsfvefcil gtdnlprtll myftntpysy
      301 snyfptvlcn sdqykktvin hnllhvafnk tfstkplslk peefdamiqs gaafathfqf
      361 dspvldridq eilkrspgkv vpggwclgdp andtcsvwgd asilrpgpga krlkkrivdl
      421 laddkyrsmq crye
//
LOCUS       XP_016714369             353 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PAM71-homolog, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016714369
VERSION     XP_016714369.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858880.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714369.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..353
                     /product="protein PAM71-homolog, chloroplastic isoform X1"
                     /calculated_mol_wt=37295
     Region          140..353
                     /region_name="Gdt1"
                     /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family
                     [General function prediction only]; COG2119"
                     /db_xref="CDD:441722"
     CDS             1..353
                     /gene="LOC107927772"
                     /coded_by="XM_016858880.2:205..1266"
                     /db_xref="GeneID:107927772"
ORIGIN      
        1 mqrlvihhrp pvisrrklpl lvvvdsfpsf dsvsrlpisp slqcrkisrl sstcstfrtr
       61 asnvgigsgg yedkderedq sivkgpcsds ssealkppsq ipyplsvagv llgctlvlsl
      121 iafakggpas llaaiaksgf taaftlifvs eigdktffia allamqyekg lvllgsmgal
      181 slmtilsvii grifqsvpaq fqttlplgey aaiallvffg lksikdawdl pptaakkgae
      241 ggpeldefae aeelvkekas kqlsnpleiv wksfslvffa ewgdrsmlat ialgaaqspw
      301 gvasgaiagh llatsiailg gaflanyise klvgylggal flvfavatff gvf
//
LOCUS       XP_016714370             348 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PAM71-homolog, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016714370
VERSION     XP_016714370.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714370.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..348
                     /product="protein PAM71-homolog, chloroplastic isoform X2"
                     /calculated_mol_wt=36772
     Region          140..348
                     /region_name="Gdt1"
                     /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family
                     [General function prediction only]; COG2119"
                     /db_xref="CDD:441722"
     CDS             1..348
                     /gene="LOC107927772"
                     /coded_by="XM_016858881.2:198..1244"
                     /db_xref="GeneID:107927772"
ORIGIN      
        1 mqrlvihhrp pvisrrklpl lvvvdsfpsf dsvsrlpisp slqcrkisrl sstcstfrtr
       61 asnvgigsgg yedkderedq sivkgpcsds ssealkppsq ipyplsvagv llgctlvlsl
      121 iafakggpas llaaiaksgf taaftlifvs eigdktffia allamqyekg lvllgsmgal
      181 slmtilsvii grifqsvpaq fqttlplgey aaiallvffg lksikdawdl pptaakkgae
      241 ggpeldefae aeelvkekas kqlsnpleiv wksfslvffa nsstvfatls lqspwgvasg
      301 aiaghllats iailggafla nyiseklvgy lggalflvfa vatffgvf
//
LOCUS       XP_016714293             232 aa            linear   PLN 06-AUG-2024
DEFINITION  acanthoscurrin-2 [Gossypium hirsutum].
ACCESSION   XP_016714293
VERSION     XP_016714293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858804.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..232
                     /product="acanthoscurrin-2"
                     /calculated_mol_wt=20052
     CDS             1..232
                     /gene="LOC107927697"
                     /coded_by="XM_016858804.2:43..741"
                     /db_xref="GeneID:107927697"
ORIGIN      
        1 mcnlcvllfv fvlltvhach arnvpgnngl ngskkeqime anapkaespk gngiddkkhf
       61 vyggvggfag vggyagvagg lplvgglggi gkfggiggaa giggykgigg lgglgggigg
      121 lgglgggtgg gggglgglgg gtgggvgglg ggtgggvggl ggggcpgtgg vgsgagglgg
      181 gcpdtggvgg gagglggggs giggisrlvg dhghghglgl ggttrggnlp pp
//
LOCUS       XP_016714403            1106 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At2g33170
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714403
VERSION     XP_016714403.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858914.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714403.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1106
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At2g33170 isoform X1"
                     /calculated_mol_wt=122011
     Region          40..1086
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          86..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          108..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..395
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          396..419
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          420..467
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          468..491
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          492..515
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          516..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          540..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..587
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          588..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          612..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          685..710
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1106
                     /gene="LOC107927799"
                     /coded_by="XM_016858914.2:381..3701"
                     /db_xref="GeneID:107927799"
ORIGIN      
        1 maftkmlknf essrlleigf wrflpvfall vtitdglnse gqlllelkng frdeynylwn
       61 wkstdetpcg wtgvscssyy kpvvwsvdls kmnlsgtvdp sigglthlkf ldlsynrfsg
      121 sipkeigncs flvflylnnn qfsgpipgel grlsylssln icnnkisgsf peelgnlssl
      181 eefvaytnnl tgplprsign lrklrifrag qnafsgslpa eisgcqslqm lglaqnhigg
      241 elpkelgmlg smtdlvlwen elsgfipkel gnctsletla lysnalvgqi paeignlkfl
      301 kklylyrnel ngsipreign lslateidfs enyltgeipt efrkikglrl lhlfenhltg
      361 vipnelnslr yltkldlsin yltgpipygf qyltqmvqlq lfdnflsgti pkllgvyspl
      421 wvvdfsdnhl tgkiplylcr ranlillnlg annllgdipt gikncktlvq lrlvgnrlng
      481 sfpselcklv nlsaielgqn nftgpvpsei gncqklqrlh iaenqfnsdl pkeignlsel
      541 vtfnvssnll sgripreivn ckmlqrldls hnsfvdtlps efgtltqlei lklsenkfsg
      601 dipaalgnls rltelqmggn lfsgeipqel gslsslqiam nlsnnhltgn ippelgnlnl
      661 lefllldnnn lsgvipsmfe hlssllgcnf synnlsgplp aiplfqnmpa ssfveneglc
      721 grplqdcngd ssspsalpvn ndsrgrmiti isgvvggvsi vliiiliyqi rrppeiiaps
      781 qekeissssp vsdiyfhpke gftfqdliea tnnfhesyii grgacgtvyk avmnsgqtia
      841 vkrlasnaeg nniensfrae iltlgkirhr nivklygfcy hqgsnlllye ymengslgel
      901 ihgrgscsle wptrftialg aaeglaylhh dckpkivhrd iksnnillde nfeahvgdfg
      961 lakvidmpqs ksmsvvagsy gyiapeyayt mkvtekcdiy sygvvllell tgktpvqpld
     1021 qggdlvthvr hyvrdhslts gilddrlnln nksivdhmlt vlkiallctn lspldrpsmr
     1081 evvvmllesk ghdddnsmts sshqsm
//
LOCUS       XP_040944036            1106 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At2g33170
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944036
VERSION     XP_040944036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088102.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1106
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At2g33170 isoform X1"
                     /calculated_mol_wt=122011
     Region          40..1086
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          86..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          108..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..395
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          396..419
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          420..467
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          468..491
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          492..515
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          516..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          540..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..587
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          588..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          612..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          685..710
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1106
                     /gene="LOC107927799"
                     /coded_by="XM_041088102.1:327..3647"
                     /db_xref="GeneID:107927799"
ORIGIN      
        1 maftkmlknf essrlleigf wrflpvfall vtitdglnse gqlllelkng frdeynylwn
       61 wkstdetpcg wtgvscssyy kpvvwsvdls kmnlsgtvdp sigglthlkf ldlsynrfsg
      121 sipkeigncs flvflylnnn qfsgpipgel grlsylssln icnnkisgsf peelgnlssl
      181 eefvaytnnl tgplprsign lrklrifrag qnafsgslpa eisgcqslqm lglaqnhigg
      241 elpkelgmlg smtdlvlwen elsgfipkel gnctsletla lysnalvgqi paeignlkfl
      301 kklylyrnel ngsipreign lslateidfs enyltgeipt efrkikglrl lhlfenhltg
      361 vipnelnslr yltkldlsin yltgpipygf qyltqmvqlq lfdnflsgti pkllgvyspl
      421 wvvdfsdnhl tgkiplylcr ranlillnlg annllgdipt gikncktlvq lrlvgnrlng
      481 sfpselcklv nlsaielgqn nftgpvpsei gncqklqrlh iaenqfnsdl pkeignlsel
      541 vtfnvssnll sgripreivn ckmlqrldls hnsfvdtlps efgtltqlei lklsenkfsg
      601 dipaalgnls rltelqmggn lfsgeipqel gslsslqiam nlsnnhltgn ippelgnlnl
      661 lefllldnnn lsgvipsmfe hlssllgcnf synnlsgplp aiplfqnmpa ssfveneglc
      721 grplqdcngd ssspsalpvn ndsrgrmiti isgvvggvsi vliiiliyqi rrppeiiaps
      781 qekeissssp vsdiyfhpke gftfqdliea tnnfhesyii grgacgtvyk avmnsgqtia
      841 vkrlasnaeg nniensfrae iltlgkirhr nivklygfcy hqgsnlllye ymengslgel
      901 ihgrgscsle wptrftialg aaeglaylhh dckpkivhrd iksnnillde nfeahvgdfg
      961 lakvidmpqs ksmsvvagsy gyiapeyayt mkvtekcdiy sygvvllell tgktpvqpld
     1021 qggdlvthvr hyvrdhslts gilddrlnln nksivdhmlt vlkiallctn lspldrpsmr
     1081 evvvmllesk ghdddnsmts sshqsm
//
LOCUS       XP_040944037            1103 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At2g33170
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944037
VERSION     XP_040944037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088103.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1103
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At2g33170 isoform X2"
                     /calculated_mol_wt=121579
     Region          40..1086
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          86..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          108..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          300..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          325..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..395
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          396..419
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          420..467
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          468..491
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          492..515
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          516..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          540..563
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          564..587
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          588..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          612..635
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          685..710
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1103
                     /gene="LOC107927799"
                     /coded_by="XM_041088103.1:370..3681"
                     /db_xref="GeneID:107927799"
ORIGIN      
        1 maftkmlknf essrlleigf wrflpvfall vtitdglnse gqlllelkng frdeynylwn
       61 wkstdetpcg wtgvscssyy kpvvwsvdls kmnlsgtvdp sigglthlkf ldlsynrfsg
      121 sipkeigncs flvflylnnn qfsgpipgel grlsylssln icnnkisgsf peelgnlssl
      181 eefvaytnnl tgplprsign lrklrifrag qnafsgslpa eisgcqslqm lglaqnhigg
      241 elpkelgmlg smtdlvlwen elsgfipkel gnctsletla lysnalvgqi paeignlkfl
      301 kklylyrnel ngsipreign lslateidfs enyltgeipt efrkikglrl lhlfenhltg
      361 vipnelnslr yltkldlsin yltgpipygf qyltqmvqlq lfdnflsgti pkllgvyspl
      421 wvvdfsdnhl tgkiplylcr ranlillnlg annllgdipt gikncktlvq lrlvgnrlng
      481 sfpselcklv nlsaielgqn nftgpvpsei gncqklqrlh iaenqfnsdl pkeignlsel
      541 vtfnvssnll sgripreivn ckmlqrldls hnsfvdtlps efgtltqlei lklsenkfsg
      601 dipaalgnls rltelqmggn lfsgeipqel gslsslqiam nlsnnhltgn ippelgnlnl
      661 lefllldnnn lsgvipsmfe hlssllgcnf synnlsgplp aiplfqnmpa ssfveneglc
      721 grplqdcngd ssspsalpvn ndsrgrmiti isgvvggvsi vliiiliyqi rrppeiiaps
      781 qekeissssp vsdiyfhpke gftfqdliea tnnfhesyii grgacgtvyk avmnsgqtia
      841 vkrlasnaeg nniensfrae iltlgkirhr nivklygfcy hqgsnlllye ymengslgel
      901 ihgrgscsle wptrftialg aaeglaylhh dckpkivhrd iksnnillde nfeahvgdfg
      961 lakvidmpqs ksmsvvagsy gyiapeyayt mkvtekcdiy sygvvllell tgktpvqpld
     1021 qggdlvthvr hyvrdhslts gilddrlnln nksivdhmlt vlkiallctn lspldrpsmr
     1081 evvvmllesk ghdddnslaa dss
//
LOCUS       XP_040944038             167 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-splicing factor SLU7 [Gossypium hirsutum].
ACCESSION   XP_040944038
VERSION     XP_040944038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088104.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..167
                     /product="pre-mRNA-splicing factor SLU7"
                     /calculated_mol_wt=19407
     Region          35..>166
                     /region_name="Slu7"
                     /note="Pre-mRNA splicing Prp18-interacting factor;
                     pfam11708"
                     /db_xref="CDD:463326"
     CDS             1..167
                     /gene="LOC107927699"
                     /coded_by="XM_041088104.1:555..1058"
                     /db_xref="GeneID:107927699"
ORIGIN      
        1 mthdakscie rprkkrakwt nmhiapdekm etfeldydgk rdrwngydps tyaclierye
       61 trdearrkyl keqqlkklee knckiegegg evsdegdalk lveskqmels kverrvrttg
      121 ggstgsvrnl rirediakyl fnldcnsayy dpksrsmred plpdtds
//
LOCUS       XP_040944039             388 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944039
VERSION     XP_040944039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088105.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..388
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43780
     Region          163..257
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     CDS             1..388
                     /gene="LOC121214450"
                     /coded_by="XM_041088105.1:126..1292"
                     /db_xref="GeneID:121214450"
ORIGIN      
        1 mskevegvet rgrarkasrs rdilsaledr vvtlessmgd ikervedvdd rlhdglqsmq
       61 eqlkeyvtdn mkqltgrdda ieamvvalkg eiaelkgelt iykvalgngg laaaapkpni
      121 dvpkpkefkg trstrdvdnf lwgieqyfca kgitedvtkv ttaamylsdv allwwrrrst
      181 dvrrggseie tweefrcefk aqfypeyaed eararlrrla qqgtvreyvq efselmlqis
      241 dmgekeaffs fmdglkpwak qelqrrgvqe ltkamsvaes laefggrkdn snsskprlkg
      301 nsggdkerpt rngdgkkpwd krksgpircf hcegphmikd cpkkaalkam eakgdfliak
      361 qvgnllrhcg sskgrltssi rrmrrgrr
//
LOCUS       XP_016714413             288 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,3;1,4-beta-D-glucanase [Gossypium hirsutum].
ACCESSION   XP_016714413
VERSION     XP_016714413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..288
                     /product="endo-1,3;1,4-beta-D-glucanase"
                     /calculated_mol_wt=31342
     Region          91..283
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..288
                     /gene="LOC107927806"
                     /coded_by="XM_016858924.2:326..1192"
                     /db_xref="GeneID:107927806"
ORIGIN      
        1 mrfrstpvhk laatvisavi flflihgahc fdlpgtatei fqkigeerki slaphcgsnp
       61 pildpesggg hvekladfnt yvsgspeckh avllasdvyg yeapnlrkia dkvadagfya
      121 vvpdffngep ydpnnpdrpk dawmkdhspv kgfedaklmi dalkskgfss igaagfcwga
      181 kavveltkae liqaavilhp syvtvadiks vklpiailga eldhlaspav lkqfddilsa
      241 nkvdrfvkvf pncshgwtlr ydinnstava raneahqdml ewllkyvk
//
LOCUS       XP_016714395             238 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,3;1,4-beta-D-glucanase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714395
VERSION     XP_016714395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858906.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..238
                     /product="endo-1,3;1,4-beta-D-glucanase isoform X1"
                     /calculated_mol_wt=25596
     Region          30..234
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..238
                     /gene="LOC107927792"
                     /coded_by="XM_016858906.2:139..855"
                     /db_xref="GeneID:107927792"
ORIGIN      
        1 msgpqccsnp ptldsasgag hvenlaglnt yvsgslqskl avflisdifg yeapnfrkla
       61 dkvaaagfyv vapdffygep ydpnnpdrpl svwikdhgpd kgyedaklvi dalkskgvss
      121 igaagfcwga kvvaglakdp liqaavmlhp sfvtvddiks vkvpiailga ehdhisppel
      181 lkqfdeilka sevdsyvkif pkvahgwsvr ydvndlaavs raneaqqdml ewfakyvk
//
LOCUS       XP_040944040             237 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,3;1,4-beta-D-glucanase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944040
VERSION     XP_040944040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088106.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="endo-1,3;1,4-beta-D-glucanase isoform X2"
                     /calculated_mol_wt=25539
     Region          30..233
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..237
                     /gene="LOC107927792"
                     /coded_by="XM_041088106.1:112..825"
                     /db_xref="GeneID:107927792"
ORIGIN      
        1 msgpqccsnp ptldsasgag hvenlaglnt yvsgslqskl avflisdifg yeapnfrkla
       61 dkvaaagfyv vapdffygep ydpnnpdrpl svwikdhgpd kgyedaklvi dalkskgvss
      121 igaagfcwak vvaglakdpl iqaavmlhps fvtvddiksv kvpiailgae hdhisppell
      181 kqfdeilkas evdsyvkifp kvahgwsvry dvndlaavsr aneaqqdmle wfakyvk
//
LOCUS       XP_016714414             348 aa            linear   PLN 06-AUG-2024
DEFINITION  ribonucleoside-diphosphate reductase small chain A [Gossypium
            hirsutum].
ACCESSION   XP_016714414
VERSION     XP_016714414.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714414.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..348
                     /product="ribonucleoside-diphosphate reductase small chain
                     A"
                     /calculated_mol_wt=40245
     Region          27..348
                     /region_name="PLN02492"
                     /note="ribonucleoside-diphosphate reductase"
                     /db_xref="CDD:215272"
     Site            order(36,47,54,119..120,123,126..127,130,133,150..151,154)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153108"
     Site            order(58,94,125,128,132,219..220,224)
                     /site_type="active"
                     /note="putative radical transfer pathway [active]"
                     /db_xref="CDD:153108"
     Site            order(94,125,128,187,221,224)
                     /site_type="other"
                     /note="diiron center [ion binding]"
                     /db_xref="CDD:153108"
     Site            132
                     /site_type="other"
                     /note="tyrosyl radical"
                     /db_xref="CDD:153108"
     CDS             1..348
                     /gene="LOC107927807"
                     /coded_by="XM_016858925.2:227..1273"
                     /db_xref="GeneID:107927807"
ORIGIN      
        1 mgslrdeeqr vmgkeeeeee ekeeeepilk qqnqrfcmfp ityqplwemy kkaeasfwta
       61 eevdlsqdvq hwetlsssek hfishvlaff aasdgivlen laarflndvq ipearafygf
      121 qiamenihse mysllletyi kdskekhrlf naiesipcvs kkakwaidwi qsstsfaerl
      181 vafaciegif fsgsfcaifw lkkrglmpgl tfsnelisrd eglhcdfacl lygllqkqlk
      241 whkvhhivhe aveietefvc ealpcaligm nstlmsqyik fvadrllvsl gcqrkysven
      301 pfdwmefisl qgkanfferr vgdyqkasvm sslqnggkny vfkldedf
//
LOCUS       XP_016714345            1327 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 33A [Gossypium
            hirsutum].
ACCESSION   XP_016714345
VERSION     XP_016714345.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858856.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714345.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1327
                     /product="mediator of RNA polymerase II transcription
                     subunit 33A"
                     /calculated_mol_wt=144933
     CDS             1..1327
                     /gene="LOC107927754"
                     /coded_by="XM_016858856.2:159..4142"
                     /db_xref="GeneID:107927754"
ORIGIN      
        1 mefslqssrl weevveqtkl akekgidpll walqvssslg tsgialpste lahvlvnyic
       61 wdnnipilwk fldkalmmki ippllviall sqrvipsrrs hpaayrlyle llkrhafalk
      121 cqingldyqe vmesidatlh lseifglqtt epailvvefi fsivwqllda slddegllel
      181 teekvsrwai kpqemeidgh dmydekniay cerlqnfntt maieiigqfl qnkatsrily
      241 laqrnmsshw vsfiqslqll gansaalkns kvltsealqe lasdsrifls recktssrqk
      301 fhavmafgsl assvslcpga srsdlwlpld mvledamdgy lvnttsavei itgltktlqa
      361 ingtnwhdtf lglwiaslrl vqrerdpieg pmprldtrlc mllsimtlvv adlieeeega
      421 ptdeteygst nhwkemkfpr krradlvssl qvlgdyqgll appkfvvsaa nqaaakamlf
      481 vsginvgsay fecvnikdmp fscsgnlrhl iieaciarnl ldtsayywpg yvngrinqlp
      541 ysvpaqapgw ssfmkgaplt svminalvss passlaelek ifeiavngse dekisaatil
      601 cgaslirgwn iqeytvkfit rlmsppvpad ftgsdshlid yapmlnvliv giasvdcvqi
      661 fslhglvpql acslmpicev fgscvpnlsw tlpsgeeisp havfsnafal llklwrfnhp
      721 piehgvgdvp tvgsqltpey lllvrnshll ssenthkdrn krrlsevass sspepvflds
      781 fpklkvwyrq hqrciaatls glvhgttvhq tvdrllnmmf rkinkgsqsi tsvtsgssss
      841 sgagiednsl kpelpawdil eavpyvvdaa ltacahgkls prelatglkd ladflpasla
      901 tivsyfsaev srcvwkpvvm ngmdwpspaa nlsnveehik kilaatgvdv prlsaggssp
      961 atlplplaaf vsltitykid ktserflnla gpaleslaad cpwpcmpiva slwtqkakrw
     1021 fdflvfsasr tvflhnsdai vqllkscfta tlglniapis snggvgallg hgfgshfcgg
     1081 lspvapgily lrvyrsirdi vfiteevvsl lmhsvreiac sglpkqkldk lkrskngmky
     1141 gqvslaaamt rvklaaslaa slvwlsgghg lvqsliketl pswfisvhrs drdqgsglva
     1201 mlggyalayf ivlcgafawg vdssssaskr rpkilgshme flasaldgki slgcdgatwh
     1261 ayvsgfvslm vgctpnwvle vdvdvlrrls kglrqwneee lalallgigg vgtmgaaael
     1321 iiehfds
//
LOCUS       XP_040944041             410 aa            linear   PLN 06-AUG-2024
DEFINITION  serine incorporator 3 [Gossypium hirsutum].
ACCESSION   XP_040944041
VERSION     XP_040944041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088107.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..410
                     /product="serine incorporator 3"
                     /calculated_mol_wt=45037
     Region          5..407
                     /region_name="Serinc"
                     /note="Serine incorporator (Serinc); pfam03348"
                     /db_xref="CDD:460891"
     CDS             1..410
                     /gene="LOC121214451"
                     /coded_by="XM_041088107.1:193..1425"
                     /db_xref="GeneID:121214451"
ORIGIN      
        1 msclasccaa stcglcstva sgisrksarl aycglfglsl ivswilrevg aplleklpwi
       61 ksstqtktwy qeqavlrvsl gnflffaila limigvkdqn dkrdswhhgg wtakmviwil
      121 lvilmfflpn vvitvyeils kfgagifllv qviilldfth swndawvekd eqkwyialla
      181 vsigcylvaf afsgilfiwf npsghdcgln vffivmtmvl afsfgvialh pavngsllpa
      241 svisvycayv cytglssepr dyvcnglhnk asavslstli lgmlttvlsv iysalragss
      301 ttflsppssp kagtkkplle gddleegket kekearpvsy sysffhlifa lasmysamll
      361 sgwtsssdss dlvdvgwtsv wvrictewvt aalyvwtlva pliipdreff
//
LOCUS       XP_016714253             485 aa            linear   PLN 06-AUG-2024
DEFINITION  DUF21 domain-containing protein At4g14240 [Gossypium hirsutum].
ACCESSION   XP_016714253
VERSION     XP_016714253.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714253.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..485
                     /product="DUF21 domain-containing protein At4g14240"
                     /calculated_mol_wt=52223
     Region          37..>435
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
     CDS             1..485
                     /gene="LOC107927654"
                     /coded_by="XM_016858764.2:80..1537"
                     /db_xref="GeneID:107927654"
ORIGIN      
        1 mqpinsvlva rmlsrtaaat esvnglesvg gglpfgslww fiyagfscff vlfagmmsgl
       61 tlglmslglv eleilqrsgt stekkqaaai lpvvqkqhql lvtlllcnav amealpiyld
      121 klfneyvaii lsvtsvlafg evipqalctr yglaiganls glvrvlmilc fpiaypvgkv
      181 ldwmlghnea lfrraqlkal vsihsqeagk ggelthdett iisgaldlte ktaeeamtpi
      241 estfsldvns kldweamgki larghsrvpv ysgnpkniig lllvkslltv rpetdtpvsa
      301 vsirriprvp sdmplydiln efqkgsshma avvrgkskna satvdgekse ennslsnaae
      361 sqlttpllpk qdekpesvtv didksfkppl cknaatngps mtsediedge vigiitledv
      421 feellqeeiv detdeyvdvh krirvaaaaa assvarapss rrltvqkgve iqskqgqgha
      481 pkklv
//
LOCUS       XP_040944042             161 aa            linear   PLN 06-AUG-2024
DEFINITION  organelle RRM domain-containing protein 2, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944042
VERSION     XP_040944042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088108.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="organelle RRM domain-containing protein 2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=17662
     Region          71..142
                     /region_name="RRM"
                     /note="RNA recognition motif; smart00360"
                     /db_xref="CDD:214636"
     CDS             1..161
                     /gene="LOC107927659"
                     /coded_by="XM_041088108.1:190..675"
                     /db_xref="GeneID:107927659"
ORIGIN      
        1 mtvlwssssi spplpslqpp ipstitskcs isnpyipktf rlgfpylthq plccsystsq
       61 sepstspstg vfikglpqst aegrlkkvfs qfgevkqvhv vrervskqsl gsafvwfdne
      121 esvqlavnel ngkffdgrfv svkiavpgls kkrgrttqyk f
//
LOCUS       XP_040944043             137 aa            linear   PLN 06-AUG-2024
DEFINITION  organelle RRM domain-containing protein 2, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944043
VERSION     XP_040944043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088109.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="organelle RRM domain-containing protein 2,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=14936
     Region          71..134
                     /region_name="RRM"
                     /note="RNA recognition motif; smart00360"
                     /db_xref="CDD:214636"
     CDS             1..137
                     /gene="LOC107927659"
                     /coded_by="XM_041088109.1:214..627"
                     /db_xref="GeneID:107927659"
ORIGIN      
        1 mtvlwssssi spplpslqpp ipstitskcs isnpyipktf rlgfpylthq plccsystsq
       61 sepstspstg vfikglpqst aegrlkkvfs qfgevkqvhv vrervskqsl gsafvwfdne
      121 esvqlavnel ngkvrfs
//
LOCUS       XP_040944044             241 aa            linear   PLN 06-AUG-2024
DEFINITION  stem-specific protein TSJT1 [Gossypium hirsutum].
ACCESSION   XP_040944044
VERSION     XP_040944044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088110.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..241
                     /product="stem-specific protein TSJT1"
                     /calculated_mol_wt=25721
     Region          2..226
                     /region_name="Wali7"
                     /note="This domain is present in Wali7, a protein of
                     unknown function, expressed in wheat and induced by
                     aluminum. Wali7 has a single domain similar to the
                     glutamine amidotransferase domain of glucosamine-fructose
                     6-phosphate synthase (GLMS or GFAT), glutamine...;
                     cd01910"
                     /db_xref="CDD:238891"
     Site            order(6,61,81..83,106)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238891"
     CDS             1..241
                     /gene="LOC107927625"
                     /coded_by="XM_041088110.1:191..916"
                     /db_xref="GeneID:107927625"
ORIGIN      
        1 mlgvfsgaiv sppdelvaag crtpspkita dalvkrfiea npstvslqig dhvqfayshr
       61 nesallprsf avkdeifcmf egaldnlgsl kqqyglgksa tevvlvieay kalrdrapyp
      121 pshmvahlng sfsfivfdns tstlfvasdq vgkvplywgi tadghvafad nvdllkgacg
      181 kslasfpqgc ffstavgelm syenpknkit avpaedeemw gatykvegpt vagtespmls
      241 f
//
LOCUS       XP_016714355             373 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016714355
VERSION     XP_016714355.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858866.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714355.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..373
                     /product="ATP-dependent (S)-NAD(P)H-hydrate dehydratase
                     isoform X1"
                     /calculated_mol_wt=40092
     Region          70..305
                     /region_name="YXKO-related"
                     /note="B.subtilis YXKO protein of unknown function and
                     related proteins. Based on the conservation of the ATP
                     binding site, the substrate binding site and the
                     Mg2+binding site and structural homology this group is a
                     member of the ribokinase-like superfamily; cd01171"
                     /db_xref="CDD:238576"
     Site            order(95,292,295)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238576"
     Site            order(226,266,293..294,297)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:238576"
     CDS             1..373
                     /gene="LOC107927761"
                     /coded_by="XM_016858866.2:192..1313"
                     /db_xref="GeneID:107927761"
ORIGIN      
        1 mfvkhgmnsg fsslassavl rrqqflirsl kgysvsdkir meavkclsgg asleanaesv
       61 lrtitpsldp trhkgqagki aviggcreyt gapyfaaisa lkigadlshv fctegaatvi
      121 ksyspelivh pileesynis gvndegkrdi skkilsefdk wmerfdclvv gpglgrdpfl
      181 lecvskimtr arqsnvpivv dgdglflvtn sielvsgyrl avltpnvney krlvqkvlgc
      241 dvndqnthge llslskqign vtilrkgksd lisdgekvqs vsiygsprrc ggqgdilsgs
      301 vavflfwarq cnsaaerest isrtnptvlg ciagsallrk aaalafehkk rstlttdiie
      361 hlgqsleais pas
//
LOCUS       XP_016714356             333 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016714356
VERSION     XP_016714356.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858867.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714356.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="ATP-dependent (S)-NAD(P)H-hydrate dehydratase
                     isoform X2"
                     /calculated_mol_wt=35607
     Region          30..265
                     /region_name="YXKO-related"
                     /note="B.subtilis YXKO protein of unknown function and
                     related proteins. Based on the conservation of the ATP
                     binding site, the substrate binding site and the
                     Mg2+binding site and structural homology this group is a
                     member of the ribokinase-like superfamily; cd01171"
                     /db_xref="CDD:238576"
     Site            order(55,252,255)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238576"
     Site            order(186,226,253..254,257)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:238576"
     CDS             1..333
                     /gene="LOC107927761"
                     /coded_by="XM_016858867.2:209..1210"
                     /db_xref="GeneID:107927761"
ORIGIN      
        1 meavkclsgg asleanaesv lrtitpsldp trhkgqagki aviggcreyt gapyfaaisa
       61 lkigadlshv fctegaatvi ksyspelivh pileesynis gvndegkrdi skkilsefdk
      121 wmerfdclvv gpglgrdpfl lecvskimtr arqsnvpivv dgdglflvtn sielvsgyrl
      181 avltpnvney krlvqkvlgc dvndqnthge llslskqign vtilrkgksd lisdgekvqs
      241 vsiygsprrc ggqgdilsgs vavflfwarq cnsaaerest isrtnptvlg ciagsallrk
      301 aaalafehkk rstlttdiie hlgqsleais pas
//
LOCUS       XP_016714357             258 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit C-3 [Gossypium hirsutum].
ACCESSION   XP_016714357
VERSION     XP_016714357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858868.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..258
                     /product="nuclear transcription factor Y subunit C-3"
                     /calculated_mol_wt=28246
     Region          98..181
                     /region_name="HFD_NFYC-like"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit gamma (NF-YC) and similar proteins;
                     cd22908"
                     /db_xref="CDD:467033"
     Site            order(105..106,109..110,113..114,116..117,120,122..124,
                     126..127,129..131,133..140,142..144,147,156..160,163,172,
                     175..176,179..180)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467033"
     Site            order(105..109,111,115,122..125,155..157,159)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467033"
     Site            order(116,118,171..172,174..175,178..179)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467033"
     CDS             1..258
                     /gene="LOC107927762"
                     /coded_by="XM_016858868.2:180..956"
                     /db_xref="GeneID:107927762"
ORIGIN      
        1 mdqqghgqts amgivgsaaa vpygitgyqa nqmmgtstpg svgsvqpptq pagpsassaq
       61 laqqqlayqh ihqqqqqqlq qqlqrfwanq yqeieqatdf knhslplari kkimkadedv
      121 rmisaeapvv faracemfil eltlrswnht eenkrrtlqk ndigaaitrt difdflvdiv
      181 predikdevl asvprvegsa dglpyyympp qlapqagapg mtvgkpvmdp tfygqksgph
      241 agqpvwppqq qqqpppds
//
LOCUS       XP_016714358             258 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit C-3 [Gossypium hirsutum].
ACCESSION   XP_016714358
VERSION     XP_016714358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858869.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..258
                     /product="nuclear transcription factor Y subunit C-3"
                     /calculated_mol_wt=28246
     Region          98..181
                     /region_name="HFD_NFYC-like"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit gamma (NF-YC) and similar proteins;
                     cd22908"
                     /db_xref="CDD:467033"
     Site            order(105..106,109..110,113..114,116..117,120,122..124,
                     126..127,129..131,133..140,142..144,147,156..160,163,172,
                     175..176,179..180)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467033"
     Site            order(105..109,111,115,122..125,155..157,159)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467033"
     Site            order(116,118,171..172,174..175,178..179)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467033"
     CDS             1..258
                     /gene="LOC107927762"
                     /coded_by="XM_016858869.2:166..942"
                     /db_xref="GeneID:107927762"
ORIGIN      
        1 mdqqghgqts amgivgsaaa vpygitgyqa nqmmgtstpg svgsvqpptq pagpsassaq
       61 laqqqlayqh ihqqqqqqlq qqlqrfwanq yqeieqatdf knhslplari kkimkadedv
      121 rmisaeapvv faracemfil eltlrswnht eenkrrtlqk ndigaaitrt difdflvdiv
      181 predikdevl asvprvegsa dglpyyympp qlapqagapg mtvgkpvmdp tfygqksgph
      241 agqpvwppqq qqqpppds
//
LOCUS       XP_016714363             463 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 10 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016714363
VERSION     XP_016714363.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858874.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714363.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..463
                     /product="protein trichome birefringence-like 10 isoform
                     X1"
                     /calculated_mol_wt=53173
     Region          104..156
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          157..446
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..463
                     /gene="LOC107927766"
                     /coded_by="XM_016858874.2:614..2005"
                     /db_xref="GeneID:107927766"
ORIGIN      
        1 mckgpsqqqd nesmpsfkrl rlfepsvgvl gfflaavcvi ccffyldyra vvkgyrvptq
       61 sdrfmwlkld esssssssss sssssssssd ivkrvdflsf egegcdvfdg dwvwdetypl
      121 yesrdcsfld egfrctengr pdlfytkwrw qpkhcnlprf dgkvmlemlr nkrlvfvgds
      181 igrnqwesll cmlasavank dsiyevngnp itkhkgflif kfkdynctve yyrspflvvq
      241 srppagspqn ikttlkldrm dwnsfrwkda dllvfntghw wnyektvrgg cyfqvgekie
      301 tkmtiehayq rsletvmqwl rnevnmsktk vyfrtfapvh frggdwrtgg schletlpel
      361 gttlvpsetw elleivkdvl sphsntshgi kfdilnitqm taprkdghas lyylgpkesp
      421 apihrqdcsh wclpgvpdaw nellyavflk qstnhtfnss stl
//
LOCUS       XP_016714364             348 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 10 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016714364
VERSION     XP_016714364.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858875.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714364.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..348
                     /product="protein trichome birefringence-like 10 isoform
                     X2"
                     /calculated_mol_wt=40469
     Region          104..156
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          157..>343
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..348
                     /gene="LOC107927766"
                     /coded_by="XM_016858875.2:608..1654"
                     /db_xref="GeneID:107927766"
ORIGIN      
        1 mckgpsqqqd nesmpsfkrl rlfepsvgvl gfflaavcvi ccffyldyra vvkgyrvptq
       61 sdrfmwlkld esssssssss sssssssssd ivkrvdflsf egegcdvfdg dwvwdetypl
      121 yesrdcsfld egfrctengr pdlfytkwrw qpkhcnlprf dgkvmlemlr nkrlvfvgds
      181 igrnqwesll cmlasavank dsiyevngnp itkhkgflif kfkdynctve yyrspflvvq
      241 srppagspqn ikttlkldrm dwnsfrwkda dllvfntghw wnyektvrgg cyfqvgekie
      301 tkmtiehayq rsletvmqwl rnevnmsktk vyfrtfapvh fssrrnfv
//
LOCUS       XP_016714234             200 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized GPI-anchored protein At3g06035 [Gossypium
            hirsutum].
ACCESSION   XP_016714234
VERSION     XP_016714234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858745.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="uncharacterized GPI-anchored protein At3g06035"
                     /calculated_mol_wt=21351
     CDS             1..200
                     /gene="LOC107927636"
                     /coded_by="XM_016858745.2:197..799"
                     /db_xref="GeneID:107927636"
ORIGIN      
        1 mafskislff pvllsilfii spvfcdndee ddllkginsy raslnltslt tnenaeclad
       61 elaeefknqp ctnstgantv pgtepqfany pnllakchln vsvtrdgavm pacvpnlaps
      121 lvltnftqsq ysgnlnetky tgigigsegd wivvvlttst tegnyatatt aattsaansv
      181 skitiihhll lllmaafyml
//
LOCUS       XP_016714237             321 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxisomal adenine nucleotide carrier 1 [Gossypium hirsutum].
ACCESSION   XP_016714237
VERSION     XP_016714237.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714237.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..321
                     /product="peroxisomal adenine nucleotide carrier 1"
                     /calculated_mol_wt=35343
     Region          3..98
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          108..188
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          203..298
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..321
                     /gene="LOC107927640"
                     /coded_by="XM_016858748.2:274..1239"
                     /db_xref="GeneID:107927640"
ORIGIN      
        1 mafdleslae atsgaigalv stsilypldt cktkyqaevr ahhqqkyrnt advlweaian
       61 gqvlslyqgl gtknlqsfis qfiyfygysf fkrlylkktg nntigtkanl ivgvaagact
      121 viitqpldta ssrmqtskfg kskglwklls esslseafda lgislllttn psiqytafdq
      181 lkqrllkrql kektstnssp ealsafsafv lgavakciat fvtypairck itiqaadldd
      241 nneteeaesk kqktvsgaly tiwkregllg fykgieaqil ktvlssalll mikekiskst
      301 wvlllalrry lfmtqtrlks a
//
LOCUS       XP_040944045             590 aa            linear   PLN 06-AUG-2024
DEFINITION  protein phosphatase 2C 70 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944045
VERSION     XP_040944045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088111.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..590
                     /product="protein phosphatase 2C 70 isoform X1"
                     /calculated_mol_wt=65229
     Region          183..293
                     /region_name="FHA_PP2C70-like"
                     /note="forkhead associated (FHA) domain found in
                     Arabidopsis thaliana protein phosphatase 2C 70 (AtPP2C70)
                     and similar proteins; cd22678"
                     /db_xref="CDD:438730"
     Site            order(212..214,227..228,230,249,251..252)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438730"
     Region          317..577
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(321,325..326,347..349,520,568)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..590
                     /gene="LOC107927788"
                     /coded_by="XM_041088111.1:253..2025"
                     /db_xref="GeneID:107927788"
ORIGIN      
        1 mamlqsivvf tllllmlili iiiiiiiivf afkpwrffsy psrcraikvg elerplvsnd
       61 vdlaqdqsnd ltrnydlege chlnaallrp prteglvhkq rlssasrrla lgdsvvgdvs
      121 dpldgilvgq tlkrrvvteh lvelqkhgrp enqsqnlrfg tendrpqesv pntdaisdqr
      181 sclslqvvsg pscglhcsvl ststarlplt lgrvppsyll lkdyevsgkh amitwnlnkl
      241 rwelvdmgsl ngtllnsrpi nhpdpgsrlw gdpvelasgd titvgttsni yvhisshner
      301 lvpfgvgmts dpmslrrggk klpmedvcyy hwplpgiyqf gvfgicdghg gvvaaksask
      361 ilpemvatil adsvkrervv seqdasdvlr dafsqteasm nnyyegctat lllvwadade
      421 nffaqcanvg dsacfinmdg kqikmtedhk vtscserlri egigeplkdg etrlcglnla
      481 rmlgdkfvkq qdsrfssepy isqvvhlkks sgafallasd glwdvvsfkk avqlvvqtre
      541 rhptetenla ekiaevmlde artqrtkdnt siifidfdsi stvssckvrp
//
LOCUS       XP_040944046             543 aa            linear   PLN 06-AUG-2024
DEFINITION  protein phosphatase 2C 70 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944046
VERSION     XP_040944046.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088112.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..543
                     /product="protein phosphatase 2C 70 isoform X2"
                     /calculated_mol_wt=59708
     Region          136..246
                     /region_name="FHA_PP2C70-like"
                     /note="forkhead associated (FHA) domain found in
                     Arabidopsis thaliana protein phosphatase 2C 70 (AtPP2C70)
                     and similar proteins; cd22678"
                     /db_xref="CDD:438730"
     Site            order(165..167,180..181,183,202,204..205)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438730"
     Region          270..530
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(274,278..279,300..302,473,521)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..543
                     /gene="LOC107927788"
                     /coded_by="XM_041088112.1:228..1859"
                     /db_xref="GeneID:107927788"
ORIGIN      
        1 mvgelerplv sndvdlaqdq sndltrnydl egechlnaal lrpprteglv hkqrlssasr
       61 rlalgdsvvg dvsdpldgil vgqtlkrrvv tehlvelqkh grpenqsqnl rfgtendrpq
      121 esvpntdais dqrsclslqv vsgpscglhc svlststarl pltlgrvpps ylllkdyevs
      181 gkhamitwnl nklrwelvdm gslngtllns rpinhpdpgs rlwgdpvela sgdtitvgtt
      241 sniyvhissh nerlvpfgvg mtsdpmslrr ggkklpmedv cyyhwplpgi yqfgvfgicd
      301 ghggvvaaks askilpemva tiladsvkre rvvseqdasd vlrdafsqte asmnnyyegc
      361 tatlllvwad adenffaqca nvgdsacfin mdgkqikmte dhkvtscser lriegigepl
      421 kdgetrlcgl nlarmlgdkf vkqqdsrfss epyisqvvhl kkssgafall asdglwdvvs
      481 fkkavqlvvq trerhptete nlaekiaevm ldeartqrtk dntsiifidf dsistvssck
      541 vrp
//
LOCUS       XP_040944047             543 aa            linear   PLN 06-AUG-2024
DEFINITION  protein phosphatase 2C 70 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944047
VERSION     XP_040944047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088113.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..543
                     /product="protein phosphatase 2C 70 isoform X2"
                     /calculated_mol_wt=59708
     Region          136..246
                     /region_name="FHA_PP2C70-like"
                     /note="forkhead associated (FHA) domain found in
                     Arabidopsis thaliana protein phosphatase 2C 70 (AtPP2C70)
                     and similar proteins; cd22678"
                     /db_xref="CDD:438730"
     Site            order(165..167,180..181,183,202,204..205)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438730"
     Region          270..530
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(274,278..279,300..302,473,521)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..543
                     /gene="LOC107927788"
                     /coded_by="XM_041088113.1:251..1882"
                     /db_xref="GeneID:107927788"
ORIGIN      
        1 mvgelerplv sndvdlaqdq sndltrnydl egechlnaal lrpprteglv hkqrlssasr
       61 rlalgdsvvg dvsdpldgil vgqtlkrrvv tehlvelqkh grpenqsqnl rfgtendrpq
      121 esvpntdais dqrsclslqv vsgpscglhc svlststarl pltlgrvpps ylllkdyevs
      181 gkhamitwnl nklrwelvdm gslngtllns rpinhpdpgs rlwgdpvela sgdtitvgtt
      241 sniyvhissh nerlvpfgvg mtsdpmslrr ggkklpmedv cyyhwplpgi yqfgvfgicd
      301 ghggvvaaks askilpemva tiladsvkre rvvseqdasd vlrdafsqte asmnnyyegc
      361 tatlllvwad adenffaqca nvgdsacfin mdgkqikmte dhkvtscser lriegigepl
      421 kdgetrlcgl nlarmlgdkf vkqqdsrfss epyisqvvhl kkssgafall asdglwdvvs
      481 fkkavqlvvq trerhptete nlaekiaevm ldeartqrtk dntsiifidf dsistvssck
      541 vrp
//
LOCUS       XP_016714347             705 aa            linear   PLN 06-AUG-2024
DEFINITION  ARM REPEAT PROTEIN INTERACTING WITH ABF2 [Gossypium hirsutum].
ACCESSION   XP_016714347
VERSION     XP_016714347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858858.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..705
                     /product="ARM REPEAT PROTEIN INTERACTING WITH ABF2"
                     /calculated_mol_wt=77716
     Region          <64..>351
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          87..131
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          141..180
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          191..222
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(213,217,221,255,259,263,297,301)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          230..266
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          272..303
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          296..463
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          314..348
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          355..386
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          525..640
                     /region_name="BTB_POZ_ARIA_plant"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in plant ARM
                     repeat protein interacting with ABF2 (ARIA) and similar
                     proteins; cd18352"
                     /db_xref="CDD:349661"
     Region          634..696
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     CDS             1..705
                     /gene="LOC107927756"
                     /coded_by="XM_016858858.2:161..2278"
                     /db_xref="GeneID:107927756"
ORIGIN      
        1 melqrceeqg lqerkgqkrk leeeiqedrd atplptgdar rallaevtaq vkvldsafsw
       61 hesdraaakr athvlaelak neevvnvive ggaipalvkh lqaplsdegd lslkpfehev
      121 ekgsafalgl lavkpehqql ivdsgalshl vnllrrhkds stsravisvi rraadaitnl
      181 ahenssiktr vrmeggippl velleftdtk vqraaagalr tlafkndenk nqivecnalp
      241 tlismlrsdd aaihyeavgv ignlvhsspn ikkevlaaga lqpvigllts ccsesqreaa
      301 lllgqfaatd sdckvhivqr gavrplieml hspdiqlkem safalgrlaq dthnqagiah
      361 mgglvpllkl ldskngslqh naafalygla dnednvsdfi rvggvqrlqd gefivqatkd
      421 cvaktlkrle ekihgrvlnh llylmrvaek pvqrrvafal ahlcspddqr tifidnngle
      481 lllgllgstn pkqqldgava lyklankamt lspmdaapps ptpqvylgeq yvnnatlsdv
      541 tflvegrrfy ahricllass daframfdgg yrekdardie ipnirwevfe lmmrfiytgs
      601 vdvsldiaqd llgaadqyll eglkrlceyt iaqdvtldnv ssmyelseaf haislrhtci
      661 lfilehfsql sdrpghshli qriipeirny fakaltnpnp hnqrp
//
LOCUS       XP_016714348             423 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuole membrane protein KMS1 [Gossypium hirsutum].
ACCESSION   XP_016714348
VERSION     XP_016714348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858859.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="vacuole membrane protein KMS1"
                     /calculated_mol_wt=47356
     Region          201..302
                     /region_name="SNARE_assoc"
                     /note="SNARE associated Golgi protein; cl00429"
                     /db_xref="CDD:469768"
     CDS             1..423
                     /gene="LOC107927757"
                     /coded_by="XM_016858859.2:353..1624"
                     /db_xref="GeneID:107927757"
ORIGIN      
        1 mgsgkgatss aqqmessvqd lreryrlele nltlttqpvk tlrffllail qyikrsasyl
       61 lakggwlmls stliavlgil lvtiegphek hveevsqyvr fglwwialgv assiglgsgl
      121 htfvlylgph ialftikamq cgridlksap ydtiqlkrvp swldkpcref gpplfssshg
      181 srvpissilp qvqieailwg lgtalgelpp yfisraasvs grkieameel dhsssedngf
      241 iathlkqieh wllshsqhmn fftilllasi pnplfdlagi mcgqfgipfw kfflatligk
      301 aiikthiqtv fiisvcnnql ldwieneliw ilsfipgfds ylptltaklh svkekylaap
      361 ppvpsnikdk wdfsfawiwn tivwlmlmnf fvkivnataq kylkkqqdks laeilpdsth
      421 sds
//
LOCUS       XP_016714412             275 aa            linear   PLN 06-AUG-2024
DEFINITION  TVP38/TMEM64 family membrane protein slr0305 [Gossypium hirsutum].
ACCESSION   XP_016714412
VERSION     XP_016714412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..275
                     /product="TVP38/TMEM64 family membrane protein slr0305"
                     /calculated_mol_wt=29291
     Region          34..231
                     /region_name="TVP38"
                     /note="Uncharacterized membrane protein YdjX, related to
                     fungal oxalate transporter, TVP38/TMEM64 family [Function
                     unknown]; COG0398"
                     /db_xref="CDD:440167"
     CDS             1..275
                     /gene="LOC107927805"
                     /coded_by="XM_016858923.2:472..1299"
                     /db_xref="GeneID:107927805"
ORIGIN      
        1 maftrgsalr ialllvllaa ivyacftlpi eailkdfllw vekdlgpwgp lvlavayipl
       61 tvlavpasvl tlgggylfgl llgfisdsig atvgagaafl lgrtigrslv vtrlkdypqf
      121 rlvaiaiqrs gfkiilllrl apllpfsmln yllsvtpvsl geyllaswlg mvpitlalvy
      181 vgttlkdlsd vthgwnefst arwaflilgl vvsvvlmicv tkvaktaldk alaesedvds
      241 tvgsspelpv dseapvdlqq pliikvesgd nsthe
//
LOCUS       XP_040944048             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944048
VERSION     XP_040944048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088114.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18925
     CDS             1..168
                     /gene="LOC121214452"
                     /coded_by="XM_041088114.1:82..588"
                     /db_xref="GeneID:121214452"
ORIGIN      
        1 mnvvsksqkt klldsfkrkm ptlsifpfgg cfdgcrdhtq psglgtrvwn hsdravelqv
       61 rvgsilkkvh tlkpgcskrl kcksiykaym pglsdgnggg gmksllyyyd qtchpyiwvn
      121 dtaadssrmv kqqyisledl rdcseirifr dhqrgcisvr kkprpgfc
//
LOCUS       XP_016714220             877 aa            linear   PLN 06-AUG-2024
DEFINITION  linoleate 9S-lipoxygenase 5 [Gossypium hirsutum].
ACCESSION   XP_016714220
VERSION     XP_016714220.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714220.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..877
                     /product="linoleate 9S-lipoxygenase 5"
                     /calculated_mol_wt=99427
     Region          1..877
                     /region_name="PLN02337"
                     /note="lipoxygenase"
                     /db_xref="CDD:215193"
     CDS             1..877
                     /gene="LOC107927619"
                     /coded_by="XM_016858731.2:167..2800"
                     /db_xref="GeneID:107927619"
ORIGIN      
        1 mfnktmvkcc gkpetndkgm aeekknknki kgalvlmkkn vldvsdlkss lldrvhellg
       61 kgvslqlisa vhtdpanglr gklgkpvyle kwvttktslt agetkldvef ewdesmgvpg
      121 afmiknnhhs qfylgtltle dvpghgrlqf vcnswvypah rynhhrvffs nktylpcqtp
      181 eplrkyreee lgnlrgngkg kgklnewdrv ydydyyndlg mpergvnfar pvlggspalp
      241 yprrgktgrk phkkdpntes rlsllnlniy vprderfnmv kfsdflayaf kslfqvlvpe
      301 iaalgdktin efdsfqdild lyeggiklpn ndtlkkikdc lpwemikelv rndgerlmkf
      361 pmpavindnr sawrtdeefa retlagvnpv visrleefpp askldpsvyg nqnstitkeh
      421 iemnmngltv eealkgnklf ildhhdalmp yirrinstst ktyatrtlfl lqddgmlkpl
      481 aielslphpq gdshgavskv ftpavdgieg siwqlakaya avndsgyhql ishwlkthav
      541 iepfiiasnr qlsvvhpiyk llhphfrdtm ninalarqil inaggvlelt vfpgkyamem
      601 safvyknwvf tdqalpvdli krgmavqdss cpfglkllie dypyavdgle iwsaietwvt
      661 eycsfyypsd evlkedteiq swwteirneg hgdlkhelww pemktraeli qactiiiwia
      721 salhaavnfg qypyagylpn rptvsrrfmp epgtdeyael ekdpdlaflk titpqfqtll
      781 gvslieilsr httdeiylgq rdtpgwtsdn eplaaferfg kklveiekrv ternndgrlk
      841 nrigavkvpy tllfpntsdy skeggltgkg ipnsisi
//
LOCUS       XP_016714359             677 aa            linear   PLN 06-AUG-2024
DEFINITION  primary amine oxidase [Gossypium hirsutum].
ACCESSION   XP_016714359
VERSION     XP_016714359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858870.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..677
                     /product="primary amine oxidase"
                     /calculated_mol_wt=76847
     Region          27..657
                     /region_name="PLN02566"
                     /note="amine oxidase (copper-containing)"
                     /db_xref="CDD:215306"
     CDS             1..677
                     /gene="LOC107927763"
                     /coded_by="XM_016858870.2:101..2134"
                     /db_xref="GeneID:107927763"
ORIGIN      
        1 mahslkilff lfstlsiipl shqleqhpld sltpnefirv qaivnqshpt sttnltfqyi
       61 glnepdkqav lswlqnhptt tppprqafvv arinhqthel iidfsrddiv sdrihhgfgy
      121 psltfqelid anqlvlnhap flaalnkrgl kleevvcgsf tvgwfgetkq ngrvvkimcy
      181 yldgtvnlym rpieaitftv dleamkiihf qdrlvvpvpk aagtdyresk qkphfgpelk
      241 gitvvqpdgp sftidgskvr wanwdfhlsf darvgpvvsl asiydtekqe frrvmyrgfv
      301 selfvpymdl teewyyrtff dageygyglc avpleplrdc panavymgay vaaqngmpie
      361 mpnvfcifer nagdvmwrht etmippdlit evrpdmslvv rmvstvgnyd yindwefkqi
      421 gsikvtvglt gllevrgsky thkdqideev ygtllaentl gayhdhfity hldldvdges
      481 nsfvksklqt vkvtdqtspr ksywkvvset aktesdakik lgsdsaellv vnpnkrtkmg
      541 nfvgyrlipg svasplmtdd dypqiraaft eynvwvtpyn ksekwaggiy tdqsrgddtl
      601 atwtsrnrri enkdivlwyt lgfhhvpyqe dfplmptist gfelrpanff eynpvlkvkg
      661 psnvrwpncs vsssglk
//
LOCUS       XP_040944049             238 aa            linear   PLN 06-AUG-2024
DEFINITION  primary amine oxidase 2-like [Gossypium hirsutum].
ACCESSION   XP_040944049
VERSION     XP_040944049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088115.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..238
                     /product="primary amine oxidase 2-like"
                     /calculated_mol_wt=26731
     Region          30..>238
                     /region_name="PLN02566"
                     /note="amine oxidase (copper-containing)"
                     /db_xref="CDD:215306"
     CDS             1..238
                     /gene="LOC107927764"
                     /coded_by="XM_041088115.1:156..872"
                     /db_xref="GeneID:107927764"
ORIGIN      
        1 mahsskifcc fsflfstlsi iplshqleqh pldsltpief irvqaivnqs hptttnditf
       61 qyiglnepdk qaliswlqnh rttpitappp rqafviarin hqthelvvdl lydnivsdhi
      121 hhgfgypllt feeqngasql vfnhapflaa lnkrglkvee vicetfaigw fgetkqnvdl
      181 eamkithfrd rlvvpvpkaa gtdyreseqk epfgpelkgi tvvqpdgpsf iidgsrvr
//
LOCUS       XP_040944050             228 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem I reaction center subunit II, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944050
VERSION     XP_040944050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088116.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..228
                     /product="photosystem I reaction center subunit II,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=25087
     Region          13..203
                     /region_name="PLN00041"
                     /note="photosystem I reaction center subunit II;
                     Provisional"
                     /db_xref="CDD:215039"
     CDS             1..228
                     /gene="LOC121214453"
                     /coded_by="XM_041088116.1:163..849"
                     /db_xref="GeneID:121214453"
ORIGIN      
        1 mamatqaslf tpstlctpks gdriaavlrk qppfltvpsf kspksiiapr tikaqateek
       61 aettatkeap vgftppeldp ntpspifggs tggllrkaql eefyvitwes pkeqifempt
      121 ggaaimrqgp nllklarkeq clalgtrlrs kykikyqfyr vfpngevqyl hpkdgvypek
      181 vnpgrqgvgq nfrsigknvs piekimifir gkkkiankii vtglyecc
//
LOCUS       XP_040944051             214 aa            linear   PLN 06-AUG-2024
DEFINITION  photosystem I reaction center subunit II, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944051
VERSION     XP_040944051.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088117.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..214
                     /product="photosystem I reaction center subunit II,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=23501
     Region          13..214
                     /region_name="PLN00041"
                     /note="photosystem I reaction center subunit II;
                     Provisional"
                     /db_xref="CDD:215039"
     CDS             1..214
                     /gene="LOC121214453"
                     /coded_by="XM_041088117.1:150..794"
                     /db_xref="GeneID:121214453"
ORIGIN      
        1 mamatqaslf tpstlctpks gdriaavlrk qppfltvpsf kspksiiapr tikaqateek
       61 aettatkeap vgftppeldp ntpspifggs tggllrkaql eefyvitwes pkeqifempt
      121 ggaaimrqgp nllklarkeq clalgtrlrs kykikyqfyr vfpngevqyl hpkdgvypek
      181 vnpgrqgvgq nfrsigknvs pievkftgkq vydl
//
LOCUS       XP_040944053             417 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944053
VERSION     XP_040944053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088119.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..417
                     /product="uncharacterized protein"
                     /calculated_mol_wt=47007
     Region          85..209
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..417
                     /gene="LOC121214454"
                     /coded_by="XM_041088119.1:246..1499"
                     /db_xref="GeneID:121214454"
ORIGIN      
        1 mgkkdqsree eklnqrvesv lqlvkkqspp ltpkqekfcn nacierflra kgdnvkkaak
       61 hlraclawre tigtenliad efsteiaegv ayvaghdees rpiivlrikq dyqkfhsqkl
      121 ftrllvftle vaiatmpknt qqfvllldas ffrsasafmn lllaalkivg eyypgrlyka
      181 fvidppslfs ylwkgvrpfv elstatmvvs sldyeesldf ndftsypras slrfdpssvk
      241 stakvgscss srfsftvshh fdslkpwylt ltsdtsaskv gptaspsplg palisplnar
      301 slsfaspaar tprgnismrk slfpstplpq rskafepvkv nhprtprpsf lqspamffrr
      361 dshvstkaek sresfmpflk fyrrpydemi yrsmmrpplg glisivkrgh msvsqrf
//
LOCUS       XP_016714373             735 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase WNK9 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016714373
VERSION     XP_016714373.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858884.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..735
                     /product="probable serine/threonine-protein kinase WNK9
                     isoform X1"
                     /calculated_mol_wt=82738
     Region          24..283
                     /region_name="STKc_WNK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     With No Lysine (WNK) kinase; cd13983"
                     /db_xref="CDD:270885"
     Site            order(32..36,38,40,53,55,88,106..109,113,115,154,156,
                     158..159,161,173,176,190..193)
                     /site_type="active"
                     /db_xref="CDD:270885"
     Site            order(32..36,38,40,53,55,88,106..109,113,154,156,158..159,
                     161,173)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270885"
     Site            order(36,113,115,154,156,158,176,190..193)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270885"
     Site            order(172..181,184..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270885"
     Region          375..433
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     CDS             1..735
                     /gene="LOC107927774"
                     /coded_by="XM_016858884.2:339..2546"
                     /db_xref="GeneID:107927774"
ORIGIN      
        1 mngetsfeld csdsdfvevd ptgrygryne ilgkgssktv ykafdeyegt evawnqvklh
       61 dllqssddle rlyceihllk tlkhenimkf ctswvdtsnr ninfvtemft sgtlrqyrlk
      121 hrkvniravk hwcrqilrgl lylhsrdppv ihrdlkcdni fingnqgevk igdlglaail
      181 rkshaarcvg tpefmapevy eeeynelvdi ysfgmcilem vtfeypysec thpaqiykkv
      241 vlgkkpealy kvkdpevref iekclatvsh rltamellrd pflqiddygl dlrlieyqrd
      301 sydagplmrq plydvhvsnn sslvngysny lgyghesnig ynsleyetse ldledghlgd
      361 vdliikgkkr dddgiflrlr iadkeagrir niyfpfdies dtalsvatem vselditdqd
      421 vtkiadmidg eiaslvpewk rglgidensi ctgssfcqnc alnghlsdfl ssssagaknl
      481 qvlecwkhgc ttvhgrfeei tyqvgepeqc vsegveasls qpdgihyadi wgqregseli
      541 ppgpkdiccn kvnemsdlsv sekeekiini dgqseskarn sfsaygsigs glfddyenei
      601 rqelrwlkak yqmqlrelrd qqlgvkpkyp slpqsfndll ndndnktasp ssiltspnre
      661 spkslpsgkh rtpyfpptag krcassasqs vqntetlgss ydldtvstak sfytgallph
      721 plhrasslpv davdv
//
LOCUS       XP_016714374             734 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase WNK9 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016714374
VERSION     XP_016714374.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858885.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..734
                     /product="probable serine/threonine-protein kinase WNK9
                     isoform X2"
                     /calculated_mol_wt=82667
     Region          24..283
                     /region_name="STKc_WNK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     With No Lysine (WNK) kinase; cd13983"
                     /db_xref="CDD:270885"
     Site            order(32..36,38,40,53,55,88,106..109,113,115,154,156,
                     158..159,161,173,176,190..193)
                     /site_type="active"
                     /db_xref="CDD:270885"
     Site            order(32..36,38,40,53,55,88,106..109,113,154,156,158..159,
                     161,173)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270885"
     Site            order(36,113,115,154,156,158,176,190..193)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270885"
     Site            order(172..181,184..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270885"
     Region          375..432
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     CDS             1..734
                     /gene="LOC107927774"
                     /coded_by="XM_016858885.2:345..2549"
                     /db_xref="GeneID:107927774"
ORIGIN      
        1 mngetsfeld csdsdfvevd ptgrygryne ilgkgssktv ykafdeyegt evawnqvklh
       61 dllqssddle rlyceihllk tlkhenimkf ctswvdtsnr ninfvtemft sgtlrqyrlk
      121 hrkvniravk hwcrqilrgl lylhsrdppv ihrdlkcdni fingnqgevk igdlglaail
      181 rkshaarcvg tpefmapevy eeeynelvdi ysfgmcilem vtfeypysec thpaqiykkv
      241 vlgkkpealy kvkdpevref iekclatvsh rltamellrd pflqiddygl dlrlieyqrd
      301 sydagplmrq plydvhvsnn sslvngysny lgyghesnig ynsleyetse ldledghlgd
      361 vdliikgkkr dddgiflrlr iadkegrirn iyfpfdiesd talsvatemv selditdqdv
      421 tkiadmidge iaslvpewkr glgidensic tgssfcqnca lnghlsdfls sssagaknlq
      481 vlecwkhgct tvhgrfeeit yqvgepeqcv segveaslsq pdgihyadiw gqregselip
      541 pgpkdiccnk vnemsdlsvs ekeekiinid gqseskarns fsaygsigsg lfddyeneir
      601 qelrwlkaky qmqlrelrdq qlgvkpkyps lpqsfndlln dndnktasps siltspnres
      661 pkslpsgkhr tpyfpptagk rcassasqsv qntetlgssy dldtvstaks fytgallphp
      721 lhrasslpvd avdv
//
LOCUS       XP_016714375             721 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase WNK9 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016714375
VERSION     XP_016714375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858886.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..721
                     /product="probable serine/threonine-protein kinase WNK9
                     isoform X3"
                     /calculated_mol_wt=81241
     Region          27..269
                     /region_name="STKc_WNK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     With No Lysine (WNK) kinase; cd13983"
                     /db_xref="CDD:270885"
     Site            order(99,101,140,142,144,162,176..179)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270885"
     Site            order(158..167,170..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270885"
     Region          361..419
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     CDS             1..721
                     /gene="LOC107927774"
                     /coded_by="XM_016858886.2:303..2468"
                     /db_xref="GeneID:107927774"
ORIGIN      
        1 mvkqalnliv liltllklil lvdmegykaf deyegtevaw nqvklhdllq ssddlerlyc
       61 eihllktlkh enimkfctsw vdtsnrninf vtemftsgtl rqyrlkhrkv niravkhwcr
      121 qilrgllylh srdppvihrd lkcdnifing nqgevkigdl glaailrksh aarcvgtpef
      181 mapevyeeey nelvdiysfg mcilemvtfe ypysecthpa qiykkvvlgk kpealykvkd
      241 pevrefiekc latvshrlta mellrdpflq iddygldlrl ieyqrdsyda gplmrqplyd
      301 vhvsnnsslv ngysnylgyg hesnigynsl eyetseldle dghlgdvdli ikgkkrdddg
      361 iflrlriadk eagrirniyf pfdiesdtal svatemvsel ditdqdvtki admidgeias
      421 lvpewkrglg idensictgs sfcqncalng hlsdflssss agaknlqvle cwkhgcttvh
      481 grfeeityqv gepeqcvseg veaslsqpdg ihyadiwgqr egselippgp kdiccnkvne
      541 msdlsvseke ekiinidgqs eskarnsfsa ygsigsglfd dyeneirqel rwlkakyqmq
      601 lrelrdqqlg vkpkypslpq sfndllndnd nktaspssil tspnrespks lpsgkhrtpy
      661 fpptagkrca ssasqsvqnt etlgssydld tvstaksfyt gallphplhr asslpvdavd
      721 v
//
LOCUS       XP_040944054             720 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase WNK9 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040944054
VERSION     XP_040944054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088120.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..720
                     /product="probable serine/threonine-protein kinase WNK9
                     isoform X4"
                     /calculated_mol_wt=81170
     Region          27..269
                     /region_name="STKc_WNK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     With No Lysine (WNK) kinase; cd13983"
                     /db_xref="CDD:270885"
     Site            order(99,101,140,142,144,162,176..179)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270885"
     Site            order(158..167,170..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270885"
     Region          361..418
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     CDS             1..720
                     /gene="LOC107927774"
                     /coded_by="XM_041088120.1:336..2498"
                     /db_xref="GeneID:107927774"
ORIGIN      
        1 mvkqalnliv liltllklil lvdmegykaf deyegtevaw nqvklhdllq ssddlerlyc
       61 eihllktlkh enimkfctsw vdtsnrninf vtemftsgtl rqyrlkhrkv niravkhwcr
      121 qilrgllylh srdppvihrd lkcdnifing nqgevkigdl glaailrksh aarcvgtpef
      181 mapevyeeey nelvdiysfg mcilemvtfe ypysecthpa qiykkvvlgk kpealykvkd
      241 pevrefiekc latvshrlta mellrdpflq iddygldlrl ieyqrdsyda gplmrqplyd
      301 vhvsnnsslv ngysnylgyg hesnigynsl eyetseldle dghlgdvdli ikgkkrdddg
      361 iflrlriadk egrirniyfp fdiesdtals vatemvseld itdqdvtkia dmidgeiasl
      421 vpewkrglgi densictgss fcqncalngh lsdflssssa gaknlqvlec wkhgcttvhg
      481 rfeeityqvg epeqcvsegv easlsqpdgi hyadiwgqre gselippgpk diccnkvnem
      541 sdlsvsekee kiinidgqse skarnsfsay gsigsglfdd yeneirqelr wlkakyqmql
      601 relrdqqlgv kpkypslpqs fndllndndn ktaspssilt spnrespksl psgkhrtpyf
      661 pptagkrcas sasqsvqnte tlgssydldt vstaksfytg allphplhra sslpvdavdv
//
LOCUS       XP_040944055             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944055
VERSION     XP_040944055.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088121.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..110
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=12515
     CDS             1..110
                     /gene="LOC107927717"
                     /coded_by="XM_041088121.1:98..430"
                     /db_xref="GeneID:107927717"
ORIGIN      
        1 msyrfffrkt fsekhnfnls fpshfisssf plrpstsasp phrcassswv inslvrhlfs
       61 rfieglqggt rlwslccycs igifegddka rcigyhitns swsvdddkcf
//
LOCUS       XP_040944056             101 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944056
VERSION     XP_040944056.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088122.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..101
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=11419
     CDS             1..101
                     /gene="LOC107927717"
                     /coded_by="XM_041088122.1:90..395"
                     /db_xref="GeneID:107927717"
ORIGIN      
        1 msyrfffrkt fsekhnfnls fpshfisssf plrpstsasp phrcassswv inslvrhlfs
       61 rfieglqggt rlwslccycs igifegddka rcigyhitns s
//
LOCUS       XP_016714366             299 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714366
VERSION     XP_016714366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858877.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..299
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33254
     Region          116..299
                     /region_name="DUF1517"
                     /note="Protein of unknown function (DUF1517); pfam07466"
                     /db_xref="CDD:462173"
     CDS             1..299
                     /gene="LOC107927768"
                     /coded_by="XM_016858877.2:319..1218"
                     /db_xref="GeneID:107927768"
ORIGIN      
        1 mafksfpkls ilavvftlll shhlyevsaa tggrmggssf ssesppshrn dddyhhynhh
       61 dlhhrhhhhy hhsqpgfprs adqesgptsa avsyliltif mgvasvivys stvqnrtsil
      121 qvqvglsaka rslqkeltei asttdtstak gwniileetv ssllhhphcy lhgyssvthh
      181 wtvgsaeqqf qrlskeerlk fdvetlvnvn nikrqravvp ngdkgdkdri vvtvlvaaqg
      241 ahklptintt dnvkealqyl adissskikg vevlwspqde tdslsveell enypqmrri
//
LOCUS       XP_016714267            1713 aa            linear   PLN 06-AUG-2024
DEFINITION  callose synthase 12 [Gossypium hirsutum].
ACCESSION   XP_016714267
VERSION     XP_016714267.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858778.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714267.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1713
                     /product="callose synthase 12"
                     /calculated_mol_wt=200578
     Region          145..258
                     /region_name="FKS1_dom1"
                     /note="1,3-beta-glucan synthase subunit FKS1, domain-1;
                     pfam14288"
                     /db_xref="CDD:464126"
     Region          854..1580
                     /region_name="Glucan_synthase"
                     /note="1,3-beta-glucan synthase component; pfam02364"
                     /db_xref="CDD:426739"
     CDS             1..1713
                     /gene="LOC107927668"
                     /coded_by="XM_016858778.2:241..5382"
                     /db_xref="GeneID:107927668"
ORIGIN      
        1 msrpcnrlsl egegyniipv hnldanhpcv rypevravll slralgnlre ppyhtwhpss
       61 mdlldwlglf fgfqhdnvkn qrehlvlhla nahmrlsmpp vdnngtfqai vlrefrhkll
      121 enyynwcsyl gkasnvdnle sdtrreflyv glylliwges anlrfmpeci cyifhhmame
      181 lnkiledyid edtgrpwips ifgenaflnr vvkpiydtie aevakskngt aphdtwrnyd
      241 dfneyfwsks cfhtlnwpld fnskftserk tgfverrtfw nvyrsfdrlw vmlflflhvm
      301 vilaweekky pwlaldnkdv kvrvlslfit wsgmrlfhal lepamefsrv srqtsrlvlr
      361 mvlrilvaaa wtgafvfcyt riwvqrnhdk hwsneanqrv tfflglafly glpelaelvl
      421 fflpciclns kvfdllswwf ygdcyigqgl reglvdriky vlfwvlvlgt kftvsyffqi
      481 kpmisttkql ldstiadyew dwqaifsvsn kftigllwlp vvliyladtq vwysfyspfv
      541 gaamgllqll geirnieqlr wrfrffatai qfnllpqeei mitggslrek lceaihqvkv
      601 rcglqrpfkm velesnlvka nefaliwnei vttfreedii sdeevgllql ppnsweirvi
      661 rwpcfllgne llhaldlatd lydapdnwlw ykickneyrr cavietydcv kylmlhklik
      721 snteehsilk alfreidhsi etekltktfr miallqihsk liklvellle pnknvneian
      781 amqslyafvv pylfkaktmd qlreyglapk srfamvswlf knavesldpc nkdfymrlkr
      841 lhtilttrds mhtipvnnea rrrlaffins lfmkmprapq vkkmiafsvl tpfndedvfs
      901 sketlktkne dgisilyylq tiyddewknf iermrregmv tadeiwttkl rdlrlwasyr
      961 gqtfartvrg mmyyyralll lafldssret dititkeeeg ialmkytyvv scqkywehka
     1021 kgdpraeeii dllkhnealr mayvdqvstg rdekeyysvl ikyeqqlqre veiyriklpg
     1081 pmnigegkpe nqnhgivftr gdavqtidmn qdnyfeealk irnlleefkh hhgihrptil
     1141 gvrehifsgs vssvawfmst qetsfitlfq plfanllkir mhyghpdvfd rfwfltrggl
     1201 skaskvinis edifagfnca lrggsvthhe yiqvgkgrdl glnqistfea kiacgngeqf
     1261 lsrdvyrlgq rldffrmlsf fhttigyffn ttvivlsvyg flwgqlylal ggdensvlgn
     1321 dtnskkamst vinqeliiqf glfmtlpail essvesgsle aiweflvmql qlstvfytfs
     1381 mgtrvhffgw tvlhggakyr qtgrkfvvqh tsftenyrly arshfikaie fglilmvyat
     1441 ftpsakvtff yidmsltcwl lvvswifapf lfnpsgldwl ktvddfddfm nwiwyrgsis
     1501 aeatkswesw wyeeqhhllt tslwgkllei ilnlrffffq ygivyhlgis gqsgsvfvyl
     1561 wswififaaf giyltmsyvr nnygakkhiy vrlaeflllv lgillvialr qftdfryvdi
     1621 fisllafipt gwgllsiaqv frplghtrlw dsvvslaryy eimfgvivmg pvavlswmpg
     1681 fqsmqtriif neafskglqm fkiitekvyq kdv
//
LOCUS       XP_016714262              98 aa            linear   PLN 06-AUG-2024
DEFINITION  callose synthase 12-like [Gossypium hirsutum].
ACCESSION   XP_016714262
VERSION     XP_016714262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858773.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..98
                     /product="callose synthase 12-like"
                     /calculated_mol_wt=11476
     CDS             1..98
                     /gene="LOC107927663"
                     /coded_by="XM_016858773.2:288..584"
                     /db_xref="GeneID:107927663"
ORIGIN      
        1 mdlldwlglf fgfqhdnvkn qrehlvlhla nahmrlslis vntfqaivlr efrrkllkny
       61 tnwcsylgka snvdnlesdt rrellyvgly llfgllhe
//
LOCUS       XP_016714340            1715 aa            linear   PLN 06-AUG-2024
DEFINITION  callose synthase 12 [Gossypium hirsutum].
ACCESSION   XP_016714340
VERSION     XP_016714340.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858851.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714340.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1715
                     /product="callose synthase 12"
                     /calculated_mol_wt=200677
     Region          145..258
                     /region_name="FKS1_dom1"
                     /note="1,3-beta-glucan synthase subunit FKS1, domain-1;
                     pfam14288"
                     /db_xref="CDD:464126"
     Region          855..1581
                     /region_name="Glucan_synthase"
                     /note="1,3-beta-glucan synthase component; pfam02364"
                     /db_xref="CDD:426739"
     CDS             1..1715
                     /gene="LOC107927749"
                     /coded_by="XM_016858851.2:109..5256"
                     /db_xref="GeneID:107927749"
ORIGIN      
        1 msrpcnrlsl egegyniipv hnldashpcv rypevravll slrslgnlre ppyhtwhpss
       61 mdlldwlglf fgfqhdnvkn qrehlvlhla nahmrlsmpp vdnngtfqai vlrefrrkll
      121 enytnwcsyl gkasnvdnle sdtrrellyv glylliwges anlrfmpecl cyifhhmame
      181 lnkiledyid edtgrpwips isgenaflnr vvkpiydtie aevakskngt aphdtwrnyd
      241 dfneyfwsks cfhtlnwpld fnnkftserk tgfverrtfw nvyrsfnrlw vmlflflhvm
      301 vilaweekky pwlaldnkdv kvrvlslfit wsgmrlfhal lepamefsrv srhtsrlvlr
      361 mvlrilvaaa wtgafvfcyt riwvqrnhdk hwsneanqrv tfflglafly glpelaelvl
      421 fflpciclns kvfdllswwf ygdcyigqgl reglvdriky vlfwvlvlgt kftvsyffqi
      481 kpmisttkql ldstiadyew dwqalfsvsn kftigllwlp vvliyladtq vwysfyspfv
      541 gaamgllqll geirnieqlr wrfrffatai qfnllpqqei mitggslrek lceaihqvkv
      601 rcglqrpfkm velesnlvka nefaliwnei vttfreedii sdeevgllql ppnsweirvi
      661 rwpcfllgne llrslnlamd fydepdnwlw ykickneyrr cavietydcv kylmlhklik
      721 ssteehsilk alfqeidhsi eiekftktfr miallqihsr liklvellle pnknvneian
      781 amqslyeivv pylfkekrtm dqlredglap ksrttmagll fenavesqdp snkdfymqvk
      841 rlhtilttrd smhsipvnne arrrlaffsn slfmkmprap rveemiafsv ltpfndeavl
      901 yskktlktkn edgisilyyl qtiyddewkn fiermrregm vtadeiwttk lrdlrlwasy
      961 rgqtfartvr gmmyyyralq llafldssse tditvtkeee gialmkytyv vscqkywehk
     1021 aigdpraeei idllkhnesl rmayvdqvst esdekeyysv lvkydrqlqr eveiyriklp
     1081 gpmnigegkp enqnhgivft rgdavqtidm nqdnyfeeal kirnlleefk hhhgihrpti
     1141 lgvrehifsg svssvawfms aqetsfvtlf qrlfanplki rmhyghpdmf drlwfmtrgg
     1201 lskaskvini sedifagfnc tlrggsvthh eyvqvgkgrd lglnqistfe akiacgsgeq
     1261 flsrdvyrlg qrldffrmls ffhttigyff nttvivlsvy gflwgqlyla lsgvensvlg
     1321 ndtnskkals avinqeliiq fglfmtlpai lessvesgfl eaiweflvmq lqlstvfytf
     1381 smgtrvhffg rtvlhggaky rqtgrnfvvq htsfaenyrl yarshfikai efglilmvya
     1441 tytpsakvtf fyidmsltcw llvvswifap flfnpsgfdw lktvddfddf mnwiwyrgsi
     1501 fakateswes wwyeeqhhll ttslwgklle iilnlrffff qygivyhlgi sgqsgsvfvy
     1561 lwswififaa fgiyltmsyv rdnygakkhi yvrlakfllm ilgillvial rqftafkyvd
     1621 vftsllalvp tgwglisiaq vfqpllrhtr lwdsvvslar yyemmfgviv mgpvavlswm
     1681 pgfqsmqtri lfndafskgl qmfkiitekv hqkdv
//
LOCUS       XP_040944058            1299 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944058
VERSION     XP_040944058.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088124.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1299
                     /product="uncharacterized protein"
                     /calculated_mol_wt=144320
     Region          625..676
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          703..742
                     /region_name="PHD2_CHD_II"
                     /note="PHD finger 2 found in class II
                     Chromodomain-Helicase-DNA binding (CHD) proteins; cd15532"
                     /db_xref="CDD:277007"
     Site            order(703,706,715,718,723,726,739,742)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:277007"
     Site            order(711..715,719,737)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277007"
     Region          <1020..1225
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..1299
                     /gene="LOC107927751"
                     /coded_by="XM_041088124.1:429..4328"
                     /db_xref="GeneID:107927751"
ORIGIN      
        1 meerlrsgeh sgvvvknrsq sgclivrkkg dgsggagstg arkifepktd kkrsrmimsd
       61 sgssdelvmp prrrvgpeti qvcnglaiye eseigrkrnr eerirsseev figwneedls
      121 eskrnkldvf dfneydglde dvimrrnrfd yggeevggrr llgsmpavgr mrikreyesg
      181 psrhaflekk kkklyfdqsd gisrdhddrn rfrkdrdgsr mhypllrery madsdgpirv
      241 qgkngvlkvm mnkkkkvgep lkkfdhleve egrsgsridd ivrrnlhvlp slysetevle
      301 kpvsfgrkek kkanllrtpt tkknkvsdcd sedsdtslkl rskdteasnp tkrvgskgqk
      361 tqveqlqptr ikegnvrrgc gtekqklrer irgmlqeagw tidyrprrnr dyldavyinp
      421 agtaywsiik aydallkqld eedegkpygd gpaftplsde vlsqltrktg kkmkkkrkde
      481 sdsenaqeav arkssstrhe desmdslshe eklssfmkgk sskyrmndnn gnakgqsslh
      541 vhdsyekpss isssrilhgr ksrklgrctl lvrgsnvgls segddfvpys grrtllawli
      601 dsgavqlsek vqymnrrrtk vmlegwitrd gihcgccski ltvskfeiha gsklrqpfqn
      661 icldsgvsll qcqidawnrq veseqigfhs vdvngddpnd dtcgicgdgg dliccdscps
      721 tfhqsclnie flpagdwhcp ncickfcsig sgiaqedeit dcalltcslc ekryhkscie
      781 vkdeihidsn slvlpfcgqt crelfehlqk ylgvkhelea gfswslirrt gadldiiakg
      841 ltqrvecnsk lavaltvmde cflpivdrrs ginivnnvly ncgsnfnrln ysgfytaile
      901 rgdeiisaas irfhgtelae mpfigtrhiy rhqgmfrrlf caiesalcsl nvhklvipai
      961 aelthtwtav fgftaleesv kqemrsvnml vfpgidmlqk vllklenmea tavtgakcte
     1021 ptpevangsk pglssgndtq ecddgglnhs sqingetega dsdsrcpnvs tndtcgtiss
     1081 sdaspdgkyn anpssshdal elqnkagldd paednqsdde tdsqsgnket esasdsenfa
     1141 ssmdynavdk gnkmvvsdsa iekntesred gdidmdavda vdnveetlsg dklaessvge
     1201 sdehnsqsdt tskgvnqvdn vavsdelgvr vsvkentlag sesgeklams aspekalisg
     1261 trtncdaiem etkstldlrk drsgyceehn vcdqvsnlq
//
LOCUS       XP_016714341            1299 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714341
VERSION     XP_016714341.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858852.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714341.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1299
                     /product="uncharacterized protein"
                     /calculated_mol_wt=144320
     Region          625..676
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          703..742
                     /region_name="PHD2_CHD_II"
                     /note="PHD finger 2 found in class II
                     Chromodomain-Helicase-DNA binding (CHD) proteins; cd15532"
                     /db_xref="CDD:277007"
     Site            order(703,706,715,718,723,726,739,742)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:277007"
     Site            order(711..715,719,737)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277007"
     Region          <1020..1225
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..1299
                     /gene="LOC107927751"
                     /coded_by="XM_016858852.2:305..4204"
                     /db_xref="GeneID:107927751"
ORIGIN      
        1 meerlrsgeh sgvvvknrsq sgclivrkkg dgsggagstg arkifepktd kkrsrmimsd
       61 sgssdelvmp prrrvgpeti qvcnglaiye eseigrkrnr eerirsseev figwneedls
      121 eskrnkldvf dfneydglde dvimrrnrfd yggeevggrr llgsmpavgr mrikreyesg
      181 psrhaflekk kkklyfdqsd gisrdhddrn rfrkdrdgsr mhypllrery madsdgpirv
      241 qgkngvlkvm mnkkkkvgep lkkfdhleve egrsgsridd ivrrnlhvlp slysetevle
      301 kpvsfgrkek kkanllrtpt tkknkvsdcd sedsdtslkl rskdteasnp tkrvgskgqk
      361 tqveqlqptr ikegnvrrgc gtekqklrer irgmlqeagw tidyrprrnr dyldavyinp
      421 agtaywsiik aydallkqld eedegkpygd gpaftplsde vlsqltrktg kkmkkkrkde
      481 sdsenaqeav arkssstrhe desmdslshe eklssfmkgk sskyrmndnn gnakgqsslh
      541 vhdsyekpss isssrilhgr ksrklgrctl lvrgsnvgls segddfvpys grrtllawli
      601 dsgavqlsek vqymnrrrtk vmlegwitrd gihcgccski ltvskfeiha gsklrqpfqn
      661 icldsgvsll qcqidawnrq veseqigfhs vdvngddpnd dtcgicgdgg dliccdscps
      721 tfhqsclnie flpagdwhcp ncickfcsig sgiaqedeit dcalltcslc ekryhkscie
      781 vkdeihidsn slvlpfcgqt crelfehlqk ylgvkhelea gfswslirrt gadldiiakg
      841 ltqrvecnsk lavaltvmde cflpivdrrs ginivnnvly ncgsnfnrln ysgfytaile
      901 rgdeiisaas irfhgtelae mpfigtrhiy rhqgmfrrlf caiesalcsl nvhklvipai
      961 aelthtwtav fgftaleesv kqemrsvnml vfpgidmlqk vllklenmea tavtgakcte
     1021 ptpevangsk pglssgndtq ecddgglnhs sqingetega dsdsrcpnvs tndtcgtiss
     1081 sdaspdgkyn anpssshdal elqnkagldd paednqsdde tdsqsgnket esasdsenfa
     1141 ssmdynavdk gnkmvvsdsa iekntesred gdidmdavda vdnveetlsg dklaessvge
     1201 sdehnsqsdt tskgvnqvdn vavsdelgvr vsvkentlag sesgeklams aspekalisg
     1261 trtncdaiem etkstldlrk drsgyceehn vcdqvsnlq
//
LOCUS       XP_016714349             516 aa            linear   PLN 06-AUG-2024
DEFINITION  FRIGIDA-like protein 4a [Gossypium hirsutum].
ACCESSION   XP_016714349
VERSION     XP_016714349.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858860.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714349.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="FRIGIDA-like protein 4a"
                     /calculated_mol_wt=56876
     Region          122..405
                     /region_name="Frigida"
                     /note="Frigida-like protein; pfam07899"
                     /db_xref="CDD:462311"
     Region          <403..495
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..516
                     /gene="LOC107927758"
                     /coded_by="XM_016858860.2:217..1767"
                     /db_xref="GeneID:107927758"
ORIGIN      
        1 mgsvpnpgel teltqpslde fqhqtslmag ctlmwkelsd hissleanlm rqsealkrki
       61 ealdsetkts ldslkkrels iddsvkiavn rvellkkdal ktlnddnpdg evdngdgllq
      121 ilkstclrme akefwnfvsg rkkdiellre kipealseci dpakfvmeai sevfpvdkrg
      181 nergndlgwa cvlvleslip avvdpvigks rmlitrsvke kakeiaetwk rsleerggid
      241 nvktpdvhtf fqhlitfgiv neeeldlyrk lvigsawrkq mpklavslgl gdkmpdmiee
      301 liskgqqlda vhftyevglv drfppvpllk aflkdakkaa ssiledpnna graaqlaark
      361 eqsalravmk cieeykleae lppenlkkrl eqlektktek rkpaavpank rtrasnggpm
      421 ppakagrstn ayvssfaapp sivrspshpq ypaavpayps pppamygtqt pptcpymysp
      481 eaapqlagsy pgapmnypay ggygngiapa yqqayy
//
LOCUS       XP_016714416             413 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714416
VERSION     XP_016714416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..413
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=46698
     Region          225..321
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(225,230,234..239,241,243,250..252,255,297,308)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            303
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..413
                     /gene="LOC107927808"
                     /coded_by="XM_016858927.2:543..1784"
                     /db_xref="GeneID:107927808"
ORIGIN      
        1 malhllrktv aypsirnsgf ltrlrsfssv fppvinkedt kptnysskih lsplfndcsf
       61 klgsdgielv ddetwrvssg lahaykgfdg emetlpsmea vdqrvdngsp iseddqdfdd
      121 idnmrirgnl fykidrgske feeyaydfhr kkgpknkddr kesknkeslh kkddpkeskr
      181 leksnvkllk dvkngsvrni pdkvevcsae kkertptfnq ltgpyhepfc ldiyiskasv
      241 raciihrats kvvavahsis kdmkfdlgst rnasacaavg lilaqraldd dihdviytpr
      301 kgdrlegklq ivlqsiidng vnvkvklkqr rpkkavqhvs pvrshlhhad qpqiswrfqh
      361 qlkltelfgs qillktssal qlllshsplf pllpekthhq qqadssyqsc sql
//
LOCUS       XP_016714417             413 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714417
VERSION     XP_016714417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..413
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=46698
     Region          225..321
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(225,230,234..239,241,243,250..252,255,297,308)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            303
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..413
                     /gene="LOC107927808"
                     /coded_by="XM_016858928.2:544..1785"
                     /db_xref="GeneID:107927808"
ORIGIN      
        1 malhllrktv aypsirnsgf ltrlrsfssv fppvinkedt kptnysskih lsplfndcsf
       61 klgsdgielv ddetwrvssg lahaykgfdg emetlpsmea vdqrvdngsp iseddqdfdd
      121 idnmrirgnl fykidrgske feeyaydfhr kkgpknkddr kesknkeslh kkddpkeskr
      181 leksnvkllk dvkngsvrni pdkvevcsae kkertptfnq ltgpyhepfc ldiyiskasv
      241 raciihrats kvvavahsis kdmkfdlgst rnasacaavg lilaqraldd dihdviytpr
      301 kgdrlegklq ivlqsiidng vnvkvklkqr rpkkavqhvs pvrshlhhad qpqiswrfqh
      361 qlkltelfgs qillktssal qlllshsplf pllpekthhq qqadssyqsc sql
//
LOCUS       XP_016714418             387 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714418
VERSION     XP_016714418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..387
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=43394
     Region          225..321
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(225,230,234..239,241,243,250..252,255,297,308)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            303
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..387
                     /gene="LOC107927808"
                     /coded_by="XM_016858929.2:537..1700"
                     /db_xref="GeneID:107927808"
ORIGIN      
        1 malhllrktv aypsirnsgf ltrlrsfssv fppvinkedt kptnysskih lsplfndcsf
       61 klgsdgielv ddetwrvssg lahaykgfdg emetlpsmea vdqrvdngsp iseddqdfdd
      121 idnmrirgnl fykidrgske feeyaydfhr kkgpknkddr kesknkeslh kkddpkeskr
      181 leksnvkllk dvkngsvrni pdkvevcsae kkertptfnq ltgpyhepfc ldiyiskasv
      241 raciihrats kvvavahsis kdmkfdlgst rnasacaavg lilaqraldd dihdviytpr
      301 kgdrlegklq ivlqsiidng vnvkvklkqr rpkkavqiwq pnsaenfirs stpafplssf
      361 ptsagkntpp ttsrlilsil fstlitc
//
LOCUS       XP_016714419             386 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714419
VERSION     XP_016714419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858930.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..386
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=43290
     Region          225..321
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(225,230,234..239,241,243,250..252,255,297,308)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            303
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..386
                     /gene="LOC107927808"
                     /coded_by="XM_016858930.2:537..1697"
                     /db_xref="GeneID:107927808"
ORIGIN      
        1 malhllrktv aypsirnsgf ltrlrsfssv fppvinkedt kptnysskih lsplfndcsf
       61 klgsdgielv ddetwrvssg lahaykgfdg emetlpsmea vdqrvdngsp iseddqdfdd
      121 idnmrirgnl fykidrgske feeyaydfhr kkgpknkddr kesknkeslh kkddpkeskr
      181 leksnvkllk dvkngsvrni pdkvevcsae kkertptfnq ltgpyhepfc ldiyiskasv
      241 raciihrats kvvavahsis kdmkfdlgst rnasacaavg lilaqraldd dihdviytpr
      301 kgdrlegklq ivlqsiidng vnvkvklkqr rpkkavqiwq pnsaenfirs stpafplssf
      361 ptsagkntpp ttsrlilsil fstlit
//
LOCUS       XP_016714420             337 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714420
VERSION     XP_016714420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858931.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..337
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=37999
     Region          225..321
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(225,230,234..239,241,243,250..252,255,297,308)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            303
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..337
                     /gene="LOC107927808"
                     /coded_by="XM_016858931.2:537..1550"
                     /db_xref="GeneID:107927808"
ORIGIN      
        1 malhllrktv aypsirnsgf ltrlrsfssv fppvinkedt kptnysskih lsplfndcsf
       61 klgsdgielv ddetwrvssg lahaykgfdg emetlpsmea vdqrvdngsp iseddqdfdd
      121 idnmrirgnl fykidrgske feeyaydfhr kkgpknkddr kesknkeslh kkddpkeskr
      181 leksnvkllk dvkngsvrni pdkvevcsae kkertptfnq ltgpyhepfc ldiyiskasv
      241 raciihrats kvvavahsis kdmkfdlgst rnasacaavg lilaqraldd dihdviytpr
      301 kgdrlegklq ivlqsiidng vnvkvklkqr rpkkavq
//
LOCUS       XP_016714241             264 aa            linear   PLN 06-AUG-2024
DEFINITION  late embryogenesis abundant protein D-34 [Gossypium hirsutum].
ACCESSION   XP_016714241
VERSION     XP_016714241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858752.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..264
                     /product="late embryogenesis abundant protein D-34"
                     /calculated_mol_wt=26768
     Region          22..77
                     /region_name="SMP"
                     /note="Seed maturation protein; pfam04927"
                     /db_xref="CDD:461485"
     Region          138..194
                     /region_name="SMP"
                     /note="Seed maturation protein; pfam04927"
                     /db_xref="CDD:461485"
     Region          203..262
                     /region_name="SMP"
                     /note="Seed maturation protein; pfam04927"
                     /db_xref="CDD:461485"
     CDS             1..264
                     /gene="LOC107927644"
                     /coded_by="XM_016858752.2:73..867"
                     /db_xref="GeneID:107927644"
ORIGIN      
        1 msqgqprrpq qpagqgenqe pikygdvfnv sgelankpia pqdaammqta etqvlgqtqk
       61 ggtaavmqaa atrneqvgvv ghnditdiag eqgvsvaetd vagrriitea vagqvvgqyv
      121 qatpvmtsqv gvvqqnaiti gealeatakt agdkpvdqsd aaavqaaevr atgsnviipg
      181 glaataqsaa ahnatldrde ekiklnqvlt gataklpadk avtrqdaegv vsaelrnnpn
      241 vathpggvaa smaaaarlne nvna
//
LOCUS       XP_016714250             384 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714250
VERSION     XP_016714250.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858761.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714250.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44278
     CDS             1..384
                     /gene="LOC107927651"
                     /coded_by="XM_016858761.2:137..1291"
                     /db_xref="GeneID:107927651"
ORIGIN      
        1 msqlypkrvy svrdisqfqy lhatdeyvke hgavpssplq gdhhpsekgk grrkrsrlse
       61 eekrerkrqh dakyrmkknr enerlkeeni mlknklkakd setrldlyel mqdvdimqgf
      121 pidlgenqpl nhpqdgfqpq lsfvaqhevq nqslvehqsi tyfqdhnpqi hiplstavpn
      181 dtgnsleqsq iisqpelivp acclpfvekl kredrhnasy shhlktllqg dttdfegyri
      241 plplhpilen ivtihgditr scmlssfsae nvllqflatf kemeetlsle qvtedqilkw
      301 kcciaealni kfhvdfaatr lieivksyld liarsgmtai deriealeme mnglkcekle
      361 idrlsftlaf snflpgrqsl dnvq
//
LOCUS       XP_016714354             526 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714354
VERSION     XP_016714354.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858865.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714354.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59183
     Region          <190..522
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     CDS             1..526
                     /gene="LOC107927760"
                     /coded_by="XM_016858865.2:193..1773"
                     /db_xref="GeneID:107927760"
ORIGIN      
        1 mmsipspprm gtpphmptas sihetrsdmd splhidlhqd lfpdyyggpa yipsipkeep
       61 srndfpngdn gfppvikend fptppvppct sgeglpyapi dwpnpgdvws wrvgrrvnna
      121 gfysdrfinv pkslrfpnsp kmfaskptle rfilshfpta dvnaffasfv wkipatlepp
      181 akvtpvavgi edakkesnle dakiesnkkt prssqrkrnp ppkpltprng qkkqktsrgs
      241 gsasakgsas atpkrqptrq rvktpapppl etedrnggle lsflddettr aefdnylnal
      301 ddmltqplpe epyshpvlyn yfaaesemae armklssfld mdfpslicfk dldeltslas
      361 klrkdptlta eqlvklklie eipsfcevfl enreimeqad nffttlqlnk tkvtslkqey
      421 selrqqvtnl qsevdtnslt vqeidnqiaq lkshraqltr lienkkkdke eltynqklva
      481 nsipkvvhev qlanarkpew eikkenadkr eaeilakfap lkgfsl
//
LOCUS       XP_016714352             526 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714352
VERSION     XP_016714352.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714352.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59183
     Region          <190..522
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     CDS             1..526
                     /gene="LOC107927760"
                     /coded_by="XM_016858863.2:370..1950"
                     /db_xref="GeneID:107927760"
ORIGIN      
        1 mmsipspprm gtpphmptas sihetrsdmd splhidlhqd lfpdyyggpa yipsipkeep
       61 srndfpngdn gfppvikend fptppvppct sgeglpyapi dwpnpgdvws wrvgrrvnna
      121 gfysdrfinv pkslrfpnsp kmfaskptle rfilshfpta dvnaffasfv wkipatlepp
      181 akvtpvavgi edakkesnle dakiesnkkt prssqrkrnp ppkpltprng qkkqktsrgs
      241 gsasakgsas atpkrqptrq rvktpapppl etedrnggle lsflddettr aefdnylnal
      301 ddmltqplpe epyshpvlyn yfaaesemae armklssfld mdfpslicfk dldeltslas
      361 klrkdptlta eqlvklklie eipsfcevfl enreimeqad nffttlqlnk tkvtslkqey
      421 selrqqvtnl qsevdtnslt vqeidnqiaq lkshraqltr lienkkkdke eltynqklva
      481 nsipkvvhev qlanarkpew eikkenadkr eaeilakfap lkgfsl
//
LOCUS       XP_016714353             526 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714353
VERSION     XP_016714353.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858864.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714353.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59183
     Region          <190..522
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     CDS             1..526
                     /gene="LOC107927760"
                     /coded_by="XM_016858864.2:186..1766"
                     /db_xref="GeneID:107927760"
ORIGIN      
        1 mmsipspprm gtpphmptas sihetrsdmd splhidlhqd lfpdyyggpa yipsipkeep
       61 srndfpngdn gfppvikend fptppvppct sgeglpyapi dwpnpgdvws wrvgrrvnna
      121 gfysdrfinv pkslrfpnsp kmfaskptle rfilshfpta dvnaffasfv wkipatlepp
      181 akvtpvavgi edakkesnle dakiesnkkt prssqrkrnp ppkpltprng qkkqktsrgs
      241 gsasakgsas atpkrqptrq rvktpapppl etedrnggle lsflddettr aefdnylnal
      301 ddmltqplpe epyshpvlyn yfaaesemae armklssfld mdfpslicfk dldeltslas
      361 klrkdptlta eqlvklklie eipsfcevfl enreimeqad nffttlqlnk tkvtslkqey
      421 selrqqvtnl qsevdtnslt vqeidnqiaq lkshraqltr lienkkkdke eltynqklva
      481 nsipkvvhev qlanarkpew eikkenadkr eaeilakfap lkgfsl
//
LOCUS       XP_016714388             204 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit beta type-2-B [Gossypium hirsutum].
ACCESSION   XP_016714388
VERSION     XP_016714388.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714388.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="proteasome subunit beta type-2-B"
                     /calculated_mol_wt=22395
     Region          1..192
                     /region_name="proteasome_beta_type_2"
                     /note="proteasome beta type-2 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03758"
                     /db_xref="CDD:239727"
     CDS             1..204
                     /gene="LOC107927786"
                     /coded_by="XM_016858899.2:138..752"
                     /db_xref="GeneID:107927786"
ORIGIN      
        1 mecvfglvgn dfaivaadts avhsilvhks nedkimilds hkliaasges gdrvqfteyv
       61 qknvalyqfr ngiplttaaa anftrgelat alrknpyfvn illagydket gpslfyidyi
      121 atlhkvdkga fgygsyfsla mmdrhyksgm tveeaidlvd kcimeirsrl vvappnfvik
      181 ivdkdgarey awresvkdaa vpsa
//
LOCUS       XP_040944059             187 aa            linear   PLN 06-AUG-2024
DEFINITION  18.1 kDa class I heat shock protein [Gossypium hirsutum].
ACCESSION   XP_040944059
VERSION     XP_040944059.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088125.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..187
                     /product="18.1 kDa class I heat shock protein"
                     /calculated_mol_wt=21267
     Region          64..155
                     /region_name="ACD_ScHsp26_like"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     cd06472"
                     /db_xref="CDD:107229"
     Site            order(64..70,77,79,81..82,104,109,112..120,122,127,
                     146..148)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107229"
     CDS             1..187
                     /gene="LOC121214455"
                     /coded_by="XM_041088125.1:180..743"
                     /db_xref="GeneID:121214455"
ORIGIN      
        1 mripnltkaf illmaitlms tqanslipys rslwdvmlae dpfkileqnp vtvpkgsepv
       61 alaradwket pryhaitldi pgmkkedlki eveenrvlri sgerkeeqei egekwhraer
      121 tngkfwrqfr lpanvdmdri kahmedgvlr isvpkivdes kkhskvidiv qsggigedvk
      181 atshghh
//
LOCUS       XP_016714384             317 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: deoxymugineic acid synthase 1-B [Gossypium
            hirsutum].
ACCESSION   XP_016714384
VERSION     XP_016714384.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858895.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714384.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..317
                     /product="LOW QUALITY PROTEIN: deoxymugineic acid synthase
                     1-B"
                     /calculated_mol_wt=35597
     Region          39..290
                     /region_name="AKR_AKR4A_4B"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); cd19124"
                     /db_xref="CDD:381350"
     Site            order(45..47,82,115..116,161..162,183,209..215,242,
                     257..260,265,269)
                     /site_type="active"
                     /db_xref="CDD:381350"
     CDS             1..317
                     /gene="LOC107927781"
                     /coded_by="XM_016858895.2:368..1321"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107927781"
ORIGIN      
        1 meagtkmqsp eketrpelst msvqsvptfp lrstdekaip ligfgtaeyp fgasrdtlke
       61 tiieaiklgl iksrdelfit sklwcsdahr dlvlpalhkt lknlkleyvd lylihwplsl
      121 kpgkhdfpfk kedmvpmdik svweameech digltksigv snfsckklet llssarippa
      181 vnqvemspmw qqkklrkfce ekgivveays plgakgaxwg tnqvmecdvl keiaqakgks
      241 vaqvclrwac eqgvcviaks fnkermkqnl difdwrlsdd ellkisqlpq ckgypalefv
      301 sddgpfkslq elwdgei
//
LOCUS       XP_040944060             205 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 20 [Gossypium
            hirsutum].
ACCESSION   XP_040944060
VERSION     XP_040944060.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088126.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="non-specific lipid transfer protein GPI-anchored
                     20"
                     /calculated_mol_wt=20852
     Region          34..113
                     /region_name="LTP_2"
                     /note="Probable lipid transfer; pfam14368"
                     /db_xref="CDD:433909"
     CDS             1..205
                     /gene="LOC121214456"
                     /coded_by="XM_041088126.1:67..684"
                     /db_xref="GeneID:121214456"
ORIGIN      
        1 malckpysrl vlalamalva atvpvygqrt innpctpsal niftpcmnll tnssangtsp
       61 tadccnslkt ltssgmdclc livtgsvpfr lpinrtlais lpracsmsgv plqcraavga
      121 pvpapgpisl aptlspgtsp tlspkgsivp eptgpaeape sntiptattg srpvlnptas
      181 aadrsygfsp slvlltlgfa vfkyy
//
LOCUS       XP_016714335             413 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CDC73 homolog [Gossypium hirsutum].
ACCESSION   XP_016714335
VERSION     XP_016714335.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858846.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714335.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..413
                     /product="protein CDC73 homolog"
                     /calculated_mol_wt=47513
     Region          30..410
                     /region_name="CDC73"
                     /note="RNA polymerase II assessory factor [Transcription];
                     COG5157"
                     /db_xref="CDD:227486"
     Region          250..405
                     /region_name="CDC73_C"
                     /note="RNA pol II accessory factor, Cdc73 family,
                     C-terminal; pfam05179"
                     /db_xref="CDD:461570"
     CDS             1..413
                     /gene="LOC107927745"
                     /coded_by="XM_016858846.2:325..1566"
                     /db_xref="GeneID:107927745"
ORIGIN      
        1 mdplsalrdf tirgeldkiv rvndefrfgt eysfpcsaet ayrskqgnly nletlvfyiq
       61 nhhrrhteym hnslslripa vtftdrkpll dyltgkvsts dsivwnppkf pdefrpdpsg
      121 fdpdstkpkg nandavldei gdahfsikdk etetvdymgi irsvekplkd regilecknk
      181 dfysvlvaat kreeerqrle sqqrkdglva ksrlmgaeer glglsygdem mgfdskpkmh
      241 lkgsklgegv piilvpsafq tlitiynvke fledgvfvpt dvkvkqmkga rpecvtvqkk
      301 fsrdrdrvvt ayevrdkpsa lkpedwdrvv avfvlgkewq fkdwpfkdhv eifnkiigff
      361 mrfeddsves akivkqwnvk iisisknkrh qdraaalevw drleefvrgr shs
//
LOCUS       XP_016714336             181 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016714336
VERSION     XP_016714336.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858847.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714336.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="non-specific lipid transfer protein GPI-anchored
                     5 isoform X1"
                     /calculated_mol_wt=18355
     Region          37..99
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..181
                     /gene="LOC107927746"
                     /coded_by="XM_016858847.2:67..612"
                     /db_xref="GeneID:107927746"
ORIGIN      
        1 malgkitlvq glalvmvtll wtgtmaqsdc tsvlitmapc fdyvtgtsst psvpccsqla
       61 nvvqlqphcl cmalsgggss lgvevnqtla lalpqlchvk tppesnckaa dgpavisisp
      121 sgspqglpph sndtpgsnss tsggsrtiaa tasdvifsts lqfilfllpi alfsstwtti
      181 s
//
LOCUS       XP_040944061             163 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944061
VERSION     XP_040944061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088127.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="non-specific lipid transfer protein GPI-anchored
                     5 isoform X2"
                     /calculated_mol_wt=16737
     Region          37..99
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..163
                     /gene="LOC107927746"
                     /coded_by="XM_041088127.1:44..535"
                     /db_xref="GeneID:107927746"
ORIGIN      
        1 malgkitlvq glalvmvtll wtgtmaqsdc tsvlitmapc fdyvtgtsst psvpccsqla
       61 nvvqlqphcl cmalsgggss lgvevnqtla lalpqlchvk tppesnckaa dgpavisisp
      121 sgspqglpph sndtpgsnss tsglvirqiy fylanikdiy gtr
//
LOCUS       XP_040944062             170 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944062
VERSION     XP_040944062.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088128.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..170
                     /product="non-specific lipid transfer protein GPI-anchored
                     5 isoform X1"
                     /calculated_mol_wt=17082
     Region          30..92
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..170
                     /gene="LOC121214457"
                     /coded_by="XM_041088128.1:421..933"
                     /db_xref="GeneID:121214457"
ORIGIN      
        1 matylvlvvv amlcagataq sgctnvligm spclnfitgs sstpsqqcct qlanvvrssp
       61 rclcqilngg gssfgininq tqalalpdsc nvqtppvssc naaspapads pvgspdsgsk
      121 iptvdagdgs rsvptarenn ssdgsttkls lslftfllla tsyssiftsh
//
LOCUS       XP_040944063             167 aa            linear   PLN 06-AUG-2024
DEFINITION  non-specific lipid transfer protein GPI-anchored 5 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944063
VERSION     XP_040944063.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088129.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..167
                     /product="non-specific lipid transfer protein GPI-anchored
                     5 isoform X2"
                     /calculated_mol_wt=16797
     Region          30..92
                     /region_name="AAI_LTSS"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; cd00010"
                     /db_xref="CDD:237980"
     CDS             1..167
                     /gene="LOC121214457"
                     /coded_by="XM_041088129.1:421..924"
                     /db_xref="GeneID:121214457"
ORIGIN      
        1 matylvlvvv amlcagataq sgctnvligm spclnfitgs sstpsqqcct qlanvvrssp
       61 rclcqilngg gssfgininq tqalalpdsc nvqtppvssc naaspapads pvgspdsgsk
      121 iptgdgsrsv ptarennssd gsttklslsl ftflllatsy ssiftsh
//
LOCUS       XP_016714249             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized N-acetyltransferase p20 [Gossypium hirsutum].
ACCESSION   XP_016714249
VERSION     XP_016714249.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858760.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714249.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized N-acetyltransferase p20"
                     /calculated_mol_wt=21092
     Region          21..183
                     /region_name="RimL"
                     /note="Protein N-acetyltransferase, RimJ/RimL family
                     [Translation, ribosomal structure and biogenesis,
                     Posttranslational modification, protein turnover,
                     chaperones]; COG1670"
                     /db_xref="CDD:441276"
     CDS             1..186
                     /gene="LOC107927650"
                     /coded_by="XM_016858760.2:157..717"
                     /db_xref="GeneID:107927650"
ORIGIN      
        1 mevisvvqld qtkakdecln lslrplqvsd vddfmvwasd ekvtrfctwe pytnkedgln
       61 yikntvvphp wfraicvddr pvgaisvsan sgndkcrgel gyvlaskywg kgivtravkm
      121 vvdtifvewp hlerlealvd venvgsqrvl ekagfqregv lrkyfilkgr srdmvmfsll
      181 stdyhs
//
LOCUS       XP_040944064             227 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 33 [Gossypium hirsutum].
ACCESSION   XP_040944064
VERSION     XP_040944064.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088130.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="receptor-like protein 33"
                     /calculated_mol_wt=25515
     Region          42..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <45..157
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..227
                     /gene="LOC121214458"
                     /coded_by="XM_041088130.1:16..699"
                     /db_xref="GeneID:121214458"
ORIGIN      
        1 mmqitnddka krvyigddyy rdsvtivnrg iemfyqkvlt iltcldlsnn sfhgripeei
       61 qmlrslrvmn lsnngfsgei pfafenlkdl esldlsrnkl sgkipaqlts ltflaglnls
      121 ynqlegsipq snqfitftnd syrgnpklcg lplsrkcnev glpmppppge dedswlyals
      181 twkialigya sglvvglcig ytalnelgnk wvdkfkkcgk rnrrrcr
//
LOCUS       XP_040944065             227 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 33 [Gossypium hirsutum].
ACCESSION   XP_040944065
VERSION     XP_040944065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088131.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="receptor-like protein 33"
                     /calculated_mol_wt=25515
     Region          42..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <45..157
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..227
                     /gene="LOC121214458"
                     /coded_by="XM_041088131.1:16..699"
                     /db_xref="GeneID:121214458"
ORIGIN      
        1 mmqitnddka krvyigddyy rdsvtivnrg iemfyqkvlt iltcldlsnn sfhgripeei
       61 qmlrslrvmn lsnngfsgei pfafenlkdl esldlsrnkl sgkipaqlts ltflaglnls
      121 ynqlegsipq snqfitftnd syrgnpklcg lplsrkcnev glpmppppge dedswlyals
      181 twkialigya sglvvglcig ytalnelgnk wvdkfkkcgk rnrrrcr
//
LOCUS       XP_040944066             227 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 33 [Gossypium hirsutum].
ACCESSION   XP_040944066
VERSION     XP_040944066.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088132.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="receptor-like protein 33"
                     /calculated_mol_wt=25515
     Region          42..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <45..157
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..227
                     /gene="LOC121214458"
                     /coded_by="XM_041088132.1:16..699"
                     /db_xref="GeneID:121214458"
ORIGIN      
        1 mmqitnddka krvyigddyy rdsvtivnrg iemfyqkvlt iltcldlsnn sfhgripeei
       61 qmlrslrvmn lsnngfsgei pfafenlkdl esldlsrnkl sgkipaqlts ltflaglnls
      121 ynqlegsipq snqfitftnd syrgnpklcg lplsrkcnev glpmppppge dedswlyals
      181 twkialigya sglvvglcig ytalnelgnk wvdkfkkcgk rnrrrcr
//
LOCUS       XP_016714309             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized N-acetyltransferase p20 [Gossypium hirsutum].
ACCESSION   XP_016714309
VERSION     XP_016714309.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858820.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714309.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized N-acetyltransferase p20"
                     /calculated_mol_wt=21158
     Region          19..183
                     /region_name="RimL"
                     /note="Protein N-acetyltransferase, RimJ/RimL family
                     [Translation, ribosomal structure and biogenesis,
                     Posttranslational modification, protein turnover,
                     chaperones]; COG1670"
                     /db_xref="CDD:441276"
     CDS             1..186
                     /gene="LOC107927715"
                     /coded_by="XM_016858820.2:94..654"
                     /db_xref="GeneID:107927715"
ORIGIN      
        1 mevtsvvqld qtkakdeypn lslrplqvsd vddfmvwasd ekvtrfctwe pytnkedgln
       61 yiknivvphp wlraiciddr pvgaisvsan sgndkcrgel gyvlafkywg kgivtravkm
      121 vvetifvewp hlerlealvd venvgsqrvl ekagfqregv lrkylivkgr srdrvmlsfl
      181 stdyqs
//
LOCUS       XP_040944067             337 aa            linear   PLN 06-AUG-2024
DEFINITION  homocysteine S-methyltransferase 3 [Gossypium hirsutum].
ACCESSION   XP_040944067
VERSION     XP_040944067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088133.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..337
                     /product="homocysteine S-methyltransferase 3"
                     /calculated_mol_wt=36640
     Region          1..336
                     /region_name="PLN02489"
                     /note="homocysteine S-methyltransferase"
                     /db_xref="CDD:215269"
     CDS             1..337
                     /gene="LOC107927633"
                     /coded_by="XM_041088133.1:124..1137"
                     /db_xref="GeneID:107927633"
ORIGIN      
        1 mglegvepss fmadflagcg gyavvdggla telerhgqdl ndplwsakcl isfpqlvrrv
       61 hldyleagan viigasyqat iqgfeakgls ieeaetlikr sveiaceare iylqrcakgy
      121 wdfldspkid rhpvlvaasv gsygayladg seysgnygas vtletlkefh rrrlqilans
      181 gadliafeti pnkleaqayv ellkeenidi pawfsfsstd gtnvvsgdpi tecakiadsc
      241 sqvvavginc tpprlihgli lsirkvtnkp viiypnsget yngetkqwek trgeteedfv
      301 syvgkwrdag aclfggccrt tpntiraisr alfdkss
//
LOCUS       XP_016714264             421 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY13 [Gossypium hirsutum].
ACCESSION   XP_016714264
VERSION     XP_016714264.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858775.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714264.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..421
                     /product="serine/threonine-protein kinase STY13"
                     /calculated_mol_wt=46980
     Region          126..393
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(126..130,134,145,147,184,216..219,223,225,264,266,
                     268..269,271,282,285,301..304)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(126..130,134,145,147,184,216..219,223,264,266,
                     268..269,271,282)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(130,223,225,264,266,268,285,301..304)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(281..289,300..304)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..421
                     /gene="LOC107927666"
                     /coded_by="XM_016858775.2:196..1461"
                     /db_xref="GeneID:107927666"
ORIGIN      
        1 mhflfrgfsc fwvlarkilp fflflfkkdq yifllplimg mdsksgqegg gdgginipke
       61 sdenskmkga intkdmmfra dkidlksldm llekhlnlvw skniekqrpv eawevdlski
      121 dlryviahgt ygtvyratyd nkdvavkvld wgggnaapae ttamqaafkq evavwhkldh
      181 pnvtkfvgas mgtsnlmits adghdslpsr accvvveylp ggtlkqylir nrrkklalkv
      241 viqlaldlsr glsylhtrki vhrdvktenl lldahrnvki adfgvaraea wnpsdmtget
      301 gtlgymapev lngkpynrkc dvysfgiclw eiyccdmpfp dlsfvqvssa vvqenlrpai
      361 prccpsslan imrkcwdanp knrpemedvv kmleavntsk gggmipedka pscfclaprg
      421 p
//
LOCUS       XP_016714367             755 aa            linear   PLN 06-AUG-2024
DEFINITION  protein tesmin/TSO1-like CXC 2 [Gossypium hirsutum].
ACCESSION   XP_016714367
VERSION     XP_016714367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858878.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..755
                     /product="protein tesmin/TSO1-like CXC 2"
                     /calculated_mol_wt=82436
     Region          460..497
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          546..581
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..755
                     /gene="LOC107927769"
                     /coded_by="XM_016858878.2:555..2822"
                     /db_xref="GeneID:107927769"
ORIGIN      
        1 mmdtpektqi ssslskfeds pvfnyinsls pikpvksihv tqtfnplsfa slpsiftsph
       61 vsshkesrfl ksytdplkpe sssadgtkvs tneeagadaq enfdqgvslg etsfempnep
      121 sriaiglpqt lkydcgspdc datpcvfktt cvsdtslaiv pffqeasekg lsdgveirdt
      181 fqveqkrdti gseweslisd tsdllifnsp ndseafrgvi qksldpgvli sqfsqddine
      241 acqttvdldk ykdqtegave mnemnpvnes fedasvtnfi sgsltdymet rmsgpysfkp
      301 dsnlhrgfrr rcldfemlaa rrknfdggst tnsstdnklv pgkpdsdspr civpgiglhl
      361 nalaiasrdn knmkletlss gtqklsfpsf nspriggaet aydslpsast eresdaveng
      421 vqlaedasqa saylvneeln qnspkkkrrr leqagegesc krcnckkskc lklycecfaa
      481 gvyciepcsc qdcfnkpihe dtvlatrkqi esrnplafap kvirtsdsvp evrddlittp
      541 ssarhkrgcn ckksnclkky cecfqggvgc sincrcegck nafgrkdgsa ivetdgepge
      601 eemdpsekna ldknfekpdi lnneeqnpas alpttplqlc rplvqlpfss kskpprsfia
      661 igsssalytg qrygkpsiir pqniiekhfq tiaedetpei lrgnsspgtg iktsspnskr
      721 isppqcelgs tpggqsgrkl ilqsipsfps ltpkh
//
LOCUS       XP_040944068             214 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor GTE10-like [Gossypium hirsutum].
ACCESSION   XP_040944068
VERSION     XP_040944068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088134.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..214
                     /product="transcription factor GTE10-like"
                     /calculated_mol_wt=23797
     CDS             1..214
                     /gene="LOC121214459"
                     /coded_by="XM_041088134.1:24..668"
                     /db_xref="GeneID:121214459"
ORIGIN      
        1 mqkmkkidva lgkqsfesgs vsyrkessvg skhrpevavl ngglpekrpk tvvnstlnpq
       61 csvilkelmk hpsvdaange rvsassnkar lrrasmlksr fadtifnaqq kkmealnvdp
      121 lmetkqekrt srqvdkkgna veaagdevkv nvelkkqrer drkvawiale kmentagiql
      181 nlevqkefei lmgcfsssny lgdvesptgr rvhq
//
LOCUS       XP_040944069             262 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S3a [Gossypium hirsutum].
ACCESSION   XP_040944069
VERSION     XP_040944069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088135.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..262
                     /product="40S ribosomal protein S3a"
                     /calculated_mol_wt=29695
     Region          22..222
                     /region_name="Ribosomal_S3Ae"
                     /note="Ribosomal S3Ae family; pfam01015"
                     /db_xref="CDD:425987"
     CDS             1..262
                     /gene="LOC121214460"
                     /coded_by="XM_041088135.1:507..1295"
                     /db_xref="GeneID:121214460"
ORIGIN      
        1 mavgknkris kgkkggkkka adpfakkdwy dikapsvfts rnvgktlvtr tqgtkiaseg
       61 lkhrvfevsl adlqggdedh ayrkirlrae dvqgknvltn fwgmnfttdk lrslvrkwqt
      121 lieahvdvkt tdnytlrmfc igftkrrpnq vkrtcyaqss qirqirrkmr eimtaqatsc
      181 dlkelvqkfi pemigkeiek atssiyplqn vfirkvkilk apkfdlgklm evhgdysedv
      241 gvkierpade tmaeptpevi ga
//
LOCUS       XP_040944070             266 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S3a-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944070
VERSION     XP_040944070.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088136.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="40S ribosomal protein S3a-2 isoform X1"
                     /calculated_mol_wt=30149
     Region          59..233
                     /region_name="Ribosomal_S3Ae"
                     /note="Ribosomal S3Ae family; pfam01015"
                     /db_xref="CDD:425987"
     CDS             1..266
                     /gene="LOC107927645"
                     /coded_by="XM_041088136.1:207..1007"
                     /db_xref="GeneID:107927645"
ORIGIN      
        1 myhiiqdnek hgfeilpgft ssllfsfvan qqgastmavg knkriskgkk ggkkkaaypf
       61 akkdwydika psvftsrnvg ktlvtrtqgt kiaseglkhp vfevsladlq ggdedhayrk
      121 irlraedvqg knvltnfwgm nfttdklrmf cirftkrrpn qvkrtcyaqs sqirqirrkm
      181 reimtaqats cdlkelvqkf ipetigkeie katssiyplq nvfirqvkil kapkfdlgkl
      241 memlrvkier padetmaept peliga
//
LOCUS       XP_016714242             261 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S3a-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714242
VERSION     XP_016714242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..261
                     /product="40S ribosomal protein S3a-2 isoform X2"
                     /calculated_mol_wt=29498
     Region          59..228
                     /region_name="Ribosomal_S3Ae"
                     /note="Ribosomal S3Ae family; pfam01015"
                     /db_xref="CDD:425987"
     CDS             1..261
                     /gene="LOC107927645"
                     /coded_by="XM_016858753.2:203..988"
                     /db_xref="GeneID:107927645"
ORIGIN      
        1 myhiiqdnek hgfeilpgft ssllfsfvan qqgastmavg knkriskgkk ggkkkaaypf
       61 akkdwydika psvftsrnvg ktlvtrtqgt kiaseglkhp vfevsladlq ggdedhayrk
      121 irlraedvqg knvltnfwgm nfttdklrft krrpnqvkrt cyaqssqirq irrkmreimt
      181 aqatscdlke lvqkfipeti gkeiekatss iyplqnvfir qvkilkapkf dlgklmemlr
      241 vkierpadet maeptpelig a
//
LOCUS       XP_016714305             219 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714305
VERSION     XP_016714305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858816.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..219
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23822
     CDS             1..219
                     /gene="LOC107927710"
                     /coded_by="XM_016858816.2:117..776"
                     /db_xref="GeneID:107927710"
ORIGIN      
        1 mflpmsslkt laflsiflll hlkiaktdfl spllsplfdd vckevecgrg kckpsingtl
       61 pfyicecdpg wkqtfsdkdd hahlkflpci vpncsmnnvc saapspaqek asdtdqsafd
      121 icrwtncggg scnktspfty dcrcsegyfn llnvsafpcy kecaigldca nlgisltnks
      181 tpvtptpsts qndvnqaclk llgtwhwviv lvlllamva
//
LOCUS       XP_040944071             478 aa            linear   PLN 06-AUG-2024
DEFINITION  VAN3-binding protein [Gossypium hirsutum].
ACCESSION   XP_040944071
VERSION     XP_040944071.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088137.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..478
                     /product="VAN3-binding protein"
                     /calculated_mol_wt=51177
     Region          28..323
                     /region_name="Auxin_canalis"
                     /note="Auxin canalization; pfam05703"
                     /db_xref="CDD:399016"
     Region          364..469
                     /region_name="PH_2"
                     /note="Plant pleckstrin homology-like region; pfam08458"
                     /db_xref="CDD:430008"
     CDS             1..478
                     /gene="LOC107927796"
                     /coded_by="XM_041088137.1:90..1526"
                     /db_xref="GeneID:107927796"
ORIGIN      
        1 mekpvvqpwr pelipvpvpv papfrppetp lepmeflsrs wsvsalevsr alapsqphps
       61 ssshqmclkg ssssgnvvil ediageleen givsgnpfsf assetsqmvl erimsqsqev
      121 sprtsgrlsh ssgpltdspp vspseiddvk qfcrasnsln mqyrtntgig aatpattavt
      181 gggktvgrwl kdrrekkkee traqnahlha aisvagvaaa vaayaaataa sssagkdeqr
      241 aktdmavasa atlvaaqcve taeamgaerd hltsvissav nvrsagdimt ltagaatalr
      301 gaatlkaral kevwniaavi pvennknggn gsnsssngsf sgellpeenf lgicsrella
      361 rgcellkrtr kgdlhwkvvs vyinrmnqvm lkmksrhvag titkkkknvv levikdmpaw
      421 pgrhllegge nrryfglktv mrgvvefeck sqkeydiwtq gvsrllsiaa eknnrnri
//
LOCUS       XP_016714397             200 aa            linear   PLN 06-AUG-2024
DEFINITION  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016714397
VERSION     XP_016714397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="1,2-dihydroxy-3-keto-5-methylthiopentene
                     dioxygenase 2"
                     /calculated_mol_wt=23524
     Region          14..168
                     /region_name="ARD"
                     /note="ARD/ARD' family; pfam03079"
                     /db_xref="CDD:281122"
     Site            order(95,99,101,105,107,144)
                     /site_type="active"
                     /db_xref="CDD:380360"
     CDS             1..200
                     /gene="LOC107927794"
                     /coded_by="XM_016858908.2:1196..1798"
                     /db_xref="GeneID:107927794"
ORIGIN      
        1 mtmgaadkre eviqawymdd sdedqrlphh repkeyvsld klselgvlsw rldadnyend
       61 eelkkireer gysymdfcev cpeklpnyee kiknffeehl htdeeirycv agsgyfdvrd
      121 hndkwirvwv kkggmivlpa giyhrftldt dnyikamrlf vgdpiwtpyn rphdhlpark
      181 eyienflqee gggqavdaaa
//
LOCUS       XP_016714235             173 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 [Gossypium hirsutum].
ACCESSION   XP_016714235
VERSION     XP_016714235.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858746.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="DNA-directed RNA polymerase III subunit RPC9"
                     /calculated_mol_wt=19370
     Region          5..118
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; cl00638"
                     /db_xref="CDD:469853"
     CDS             1..173
                     /gene="LOC107927637"
                     /coded_by="XM_016858746.2:266..787"
                     /db_xref="GeneID:107927637"
ORIGIN      
        1 mkikeanaga ltnfevlgfl rsrgaskdpt rvivpiapse fkvydylves aacnqtkehv
       61 keflercksy klakaevlni inlrpsalve idpiieesek rfgeqleelv nlvvevlpep
      121 ptqklpepes nevkedtmdg knmdedktet vtveqidkdq iepnedgeqi vvs
//
LOCUS       XP_040944072             173 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 [Gossypium hirsutum].
ACCESSION   XP_040944072
VERSION     XP_040944072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088138.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="DNA-directed RNA polymerase III subunit RPC9"
                     /calculated_mol_wt=19370
     Region          5..118
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; cl00638"
                     /db_xref="CDD:469853"
     CDS             1..173
                     /gene="LOC107927637"
                     /coded_by="XM_041088138.1:266..787"
                     /db_xref="GeneID:107927637"
ORIGIN      
        1 mkikeanaga ltnfevlgfl rsrgaskdpt rvivpiapse fkvydylves aacnqtkehv
       61 keflercksy klakaevlni inlrpsalve idpiieesek rfgeqleelv nlvvevlpep
      121 ptqklpepes nevkedtmdg knmdedktet vtveqidkdq iepnedgeqi vvs
//
LOCUS       XP_016714396             347 aa            linear   PLN 06-AUG-2024
DEFINITION  perakine reductase [Gossypium hirsutum].
ACCESSION   XP_016714396
VERSION     XP_016714396.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714396.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="perakine reductase"
                     /calculated_mol_wt=38473
     Region          11..316
                     /region_name="AKR_AKR13D1"
                     /note="AKR13D family of aldo-keto reductase (AKR);
                     cd19145"
                     /db_xref="CDD:381371"
     Site            order(29,216..219,222,271,289..293,296,299..300)
                     /site_type="active"
                     /db_xref="CDD:381371"
     Site            order(60,65,92,137)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381371"
     CDS             1..347
                     /gene="LOC107927793"
                     /coded_by="XM_016858907.2:115..1158"
                     /db_xref="GeneID:107927793"
ORIGIN      
        1 meqnpqiqps rvklgsqgle vsrlgfgcvg lsgvynapls heegcsvike aynrgitffd
       61 tadaygdkhd neimlgkalk hlprekiqvs tkfgvvkwes eghrlyavkg taehvracce
      121 aslkrldvdy idlyfqhrvd tsvpieetmg elkklveegk ikyiglsean vdtikrahkv
      181 hpitalqmey slwtreiedk fiplcrelgi givaysplgr gffggkvvde ampngsllan
      241 yprfngenle knkllytrvs nlavkhgctv aqlalawllh qgddivpipg ttkvknminn
      301 vgclglklse ddlkeigdav pvdevvgere lgvfskydwk fantplk
//
LOCUS       XP_016714394             466 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP sulfurylase 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016714394
VERSION     XP_016714394.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714394.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="ATP sulfurylase 1, chloroplastic"
                     /calculated_mol_wt=52094
     Region          56..447
                     /region_name="sopT"
                     /note="ATP sulphurylase; TIGR00339"
                     /db_xref="CDD:273023"
     CDS             1..466
                     /gene="LOC107927791"
                     /coded_by="XM_016858905.2:231..1631"
                     /db_xref="GeneID:107927791"
ORIGIN      
        1 msstifiqtp fqfkslnksl nthfvpsfkl pvslsfkprt aafskrvhir agliepdggk
       61 lvdlhvsepe relkkreaas lpkvkltpid vqwvhvlseg waspltgfmr eseflqtlhf
      121 nslrldggsf vnmsvpiila iddlqkasig esdrvallds ddkliailtd ieiykhpkee
      181 riartwgtta pglpyveeti tnagnwligg dleviapiky ndgldrfrls pvelrkefer
      241 rnadavfafq lrnpvhngha llmtdthrrl lemgyknpvl llhplggytk addvplswrm
      301 kqhekvledg vldpettvvs ifpspmhyag ptevqwhaka rinaganfyi vgrdpagmgh
      361 pvekrdlyda dhgkkvlsma pglerlnilp frvaaydktq gkmaffdpsr aqdflfisgt
      421 kmrtlaknke npppgfmcpg gwevlveyya sltpsdndri pqpvaa
//
LOCUS       XP_040944073            1236 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944073
VERSION     XP_040944073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088139.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1236
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=135095
     Region          <170..437
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1236
                     /gene="LOC107927804"
                     /coded_by="XM_041088139.1:897..4607"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqeenntv dnksvqefdh adglkgqnhv vqaildtdsq tankeedekt
       61 qedaartdye qeqnhevvvs edvyvngkde keedtnmipv dkelsmiesg yeeeakgqgh
      121 lvpaaedkdt rnetesatlq hdglaspcik dgehdekeqd sstildveem plkeaartee
      181 tnaeaclvpa ggdestcgte tgqvsgdrgg keypsvdkqk pdekeeditv ndeteeqssq
      241 eaantdetna eaclvpaggd esnrgtetgq vsgdrggmey psvdkqtpde keeditvnde
      301 teeqssqeaa stdvldrqvq llpvvedkat hgnqigfvts dpegtadlng dnpkehekee
      361 dtnmiqvdke nsmkeagyad daegqdhlvp aaedtntrgn etesvslehd glasphieds
      421 eheekeqdts tileveeipl keaaitdetn aearlapagg desthgtetg lvfddhdgte
      481 ypcidkqkhd ekeditinde aaerssqeaa ntdvlatved kathgneigl dstepegtad
      541 lqsdnpeehe temnntnaep qekplakddi eeknptiraa egedynktea vsasgdpvvv
      601 gdtpdnkile gqeqgkteld ppaestevda kpgevvggse teptsstknl edqemekesn
      661 feenlsgrnh dvenqnpmkk edeeasnsls gaasslepde helaeictel lvlecngpvk
      721 sedmiipslt cqdqengfil ddsvstdpve tvspdlspea gkgrdeflve emaikevsrd
      781 eklelkdgdd eagnglgtit tvmtdlptgi gakcngelps emnsakndsi esqnilveas
      841 eteledkgmv lsqkgasvee esengnakqs hcqvqsaqea tekpngqgse egskdddqsa
      901 lspqfmmngr qkekitclln adcdsnkdcq flqakileng hmvdasinhq kqqkdsqqev
      961 qlvtdssdtf fmdqmnkees eekkiieekk dsnpiengkq cisqsydpie qmqgsvmaev
     1021 kqeplwdlse ypkpipltmi dttpkqcskq cangetpqvv aiangdynnq resvgrfsle
     1081 snpdtinsqm rkspsfdldl riharaedsd qtpllyqdkt tiesfstqae ekantengen
     1141 psqyesmate ekavtlersd seksrtpflg flkedeeead ehnmlmeknp kkqgnqsatn
     1201 ktttkvstsv ttkgkvkrkp itaffgtcmc catvtn
//
LOCUS       XP_040944074            1235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944074
VERSION     XP_040944074.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088140.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1235
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=134966
     Region          <169..436
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1235
                     /gene="LOC107927804"
                     /coded_by="XM_041088140.1:897..4604"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqenntvd nksvqefdha dglkgqnhvv qaildtdsqt ankeedektq
       61 edaartdyeq eqnhevvvse dvyvngkdek eedtnmipvd kelsmiesgy eeeakgqghl
      121 vpaaedkdtr netesatlqh dglaspcikd gehdekeqds stildveemp lkeaarteet
      181 naeaclvpag gdestcgtet gqvsgdrggk eypsvdkqkp dekeeditvn deteeqssqe
      241 aantdetnae aclvpaggde snrgtetgqv sgdrggmeyp svdkqtpdek eeditvndet
      301 eeqssqeaas tdvldrqvql lpvvedkath gnqigfvtsd pegtadlngd npkehekeed
      361 tnmiqvdken smkeagyadd aegqdhlvpa aedtntrgne tesvslehdg lasphiedse
      421 heekeqdtst ileveeiplk eaaitdetna earlapaggd esthgtetgl vfddhdgtey
      481 pcidkqkhde keditindea aerssqeaan tdvlatvedk athgneigld stepegtadl
      541 qsdnpeehet emnntnaepq ekplakddie eknptiraae gedynkteav sasgdpvvvg
      601 dtpdnkileg qeqgkteldp paestevdak pgevvggset eptsstknle dqemekesnf
      661 eenlsgrnhd venqnpmkke deeasnslsg aasslepdeh elaeictell vlecngpvks
      721 edmiipsltc qdqengfild dsvstdpvet vspdlspeag kgrdeflvee maikevsrde
      781 klelkdgdde agnglgtitt vmtdlptgig akcngelpse mnsakndsie sqnilvease
      841 teledkgmvl sqkgasveee sengnakqsh cqvqsaqeat ekpngqgsee gskdddqsal
      901 spqfmmngrq kekitcllna dcdsnkdcqf lqakilengh mvdasinhqk qqkdsqqevq
      961 lvtdssdtff mdqmnkeese ekkiieekkd snpiengkqc isqsydpieq mqgsvmaevk
     1021 qeplwdlsey pkpipltmid ttpkqcskqc angetpqvva iangdynnqr esvgrfsles
     1081 npdtinsqmr kspsfdldlr iharaedsdq tpllyqdktt iesfstqaee kantengenp
     1141 sqyesmatee kavtlersds eksrtpflgf lkedeeeade hnmlmeknpk kqgnqsatnk
     1201 tttkvstsvt tkgkvkrkpi taffgtcmcc atvtn
//
LOCUS       XP_040944075            1235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944075
VERSION     XP_040944075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088141.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1235
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=134966
     Region          <169..436
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1235
                     /gene="LOC107927804"
                     /coded_by="XM_041088141.1:152..3859"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqenntvd nksvqefdha dglkgqnhvv qaildtdsqt ankeedektq
       61 edaartdyeq eqnhevvvse dvyvngkdek eedtnmipvd kelsmiesgy eeeakgqghl
      121 vpaaedkdtr netesatlqh dglaspcikd gehdekeqds stildveemp lkeaarteet
      181 naeaclvpag gdestcgtet gqvsgdrggk eypsvdkqkp dekeeditvn deteeqssqe
      241 aantdetnae aclvpaggde snrgtetgqv sgdrggmeyp svdkqtpdek eeditvndet
      301 eeqssqeaas tdvldrqvql lpvvedkath gnqigfvtsd pegtadlngd npkehekeed
      361 tnmiqvdken smkeagyadd aegqdhlvpa aedtntrgne tesvslehdg lasphiedse
      421 heekeqdtst ileveeiplk eaaitdetna earlapaggd esthgtetgl vfddhdgtey
      481 pcidkqkhde keditindea aerssqeaan tdvlatvedk athgneigld stepegtadl
      541 qsdnpeehet emnntnaepq ekplakddie eknptiraae gedynkteav sasgdpvvvg
      601 dtpdnkileg qeqgkteldp paestevdak pgevvggset eptsstknle dqemekesnf
      661 eenlsgrnhd venqnpmkke deeasnslsg aasslepdeh elaeictell vlecngpvks
      721 edmiipsltc qdqengfild dsvstdpvet vspdlspeag kgrdeflvee maikevsrde
      781 klelkdgdde agnglgtitt vmtdlptgig akcngelpse mnsakndsie sqnilvease
      841 teledkgmvl sqkgasveee sengnakqsh cqvqsaqeat ekpngqgsee gskdddqsal
      901 spqfmmngrq kekitcllna dcdsnkdcqf lqakilengh mvdasinhqk qqkdsqqevq
      961 lvtdssdtff mdqmnkeese ekkiieekkd snpiengkqc isqsydpieq mqgsvmaevk
     1021 qeplwdlsey pkpipltmid ttpkqcskqc angetpqvva iangdynnqr esvgrfsles
     1081 npdtinsqmr kspsfdldlr iharaedsdq tpllyqdktt iesfstqaee kantengenp
     1141 sqyesmatee kavtlersds eksrtpflgf lkedeeeade hnmlmeknpk kqgnqsatnk
     1201 tttkvstsvt tkgkvkrkpi taffgtcmcc atvtn
//
LOCUS       XP_040944076            1235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944076
VERSION     XP_040944076.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088142.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1235
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=134966
     Region          <169..436
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1235
                     /gene="LOC107927804"
                     /coded_by="XM_041088142.1:898..4605"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqeenntv dnksvqefdh adglkgqnhv vqaildtdsq tankedektq
       61 edaartdyeq eqnhevvvse dvyvngkdek eedtnmipvd kelsmiesgy eeeakgqghl
      121 vpaaedkdtr netesatlqh dglaspcikd gehdekeqds stildveemp lkeaarteet
      181 naeaclvpag gdestcgtet gqvsgdrggk eypsvdkqkp dekeeditvn deteeqssqe
      241 aantdetnae aclvpaggde snrgtetgqv sgdrggmeyp svdkqtpdek eeditvndet
      301 eeqssqeaas tdvldrqvql lpvvedkath gnqigfvtsd pegtadlngd npkehekeed
      361 tnmiqvdken smkeagyadd aegqdhlvpa aedtntrgne tesvslehdg lasphiedse
      421 heekeqdtst ileveeiplk eaaitdetna earlapaggd esthgtetgl vfddhdgtey
      481 pcidkqkhde keditindea aerssqeaan tdvlatvedk athgneigld stepegtadl
      541 qsdnpeehet emnntnaepq ekplakddie eknptiraae gedynkteav sasgdpvvvg
      601 dtpdnkileg qeqgkteldp paestevdak pgevvggset eptsstknle dqemekesnf
      661 eenlsgrnhd venqnpmkke deeasnslsg aasslepdeh elaeictell vlecngpvks
      721 edmiipsltc qdqengfild dsvstdpvet vspdlspeag kgrdeflvee maikevsrde
      781 klelkdgdde agnglgtitt vmtdlptgig akcngelpse mnsakndsie sqnilvease
      841 teledkgmvl sqkgasveee sengnakqsh cqvqsaqeat ekpngqgsee gskdddqsal
      901 spqfmmngrq kekitcllna dcdsnkdcqf lqakilengh mvdasinhqk qqkdsqqevq
      961 lvtdssdtff mdqmnkeese ekkiieekkd snpiengkqc isqsydpieq mqgsvmaevk
     1021 qeplwdlsey pkpipltmid ttpkqcskqc angetpqvva iangdynnqr esvgrfsles
     1081 npdtinsqmr kspsfdldlr iharaedsdq tpllyqdktt iesfstqaee kantengenp
     1141 sqyesmatee kavtlersds eksrtpflgf lkedeeeade hnmlmeknpk kqgnqsatnk
     1201 tttkvstsvt tkgkvkrkpi taffgtcmcc atvtn
//
LOCUS       XP_040944077            1235 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944077
VERSION     XP_040944077.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088143.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1235
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=134966
     Region          <170..437
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1235
                     /gene="LOC107927804"
                     /coded_by="XM_041088143.1:914..4621"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqeenntv dnksvqefdh adglkgqnhv vqaildtdsq tankeedekt
       61 qedaartdye qeqnhevvvs edvyvngkde keedtnmipv dkelsmiesg yeeeakgqgh
      121 lvpaaedkdt rnetesatlq hdglaspcik dgehdekeqd sstildveem plkeaartee
      181 tnaeaclvpa ggdestcgte tgqvsgdrgg keypsvdkqk pdekeeditv ndeteeqssq
      241 eaantdetna eaclvpaggd esnrgtetgq vsgdrggmey psvdkqtpde keeditvnde
      301 teeqssqeaa stdvldrqvq llpvvedkat hgnqigfvts dpegtadlng dnpkehekee
      361 dtnmiqvdke nsmkeagyad daegqdhlvp aaedtntrgn etesvslehd glasphieds
      421 eheekeqdts tileveeipl keaaitdetn aearlapagg desthgtetg lvfddhdgte
      481 ypcidkqkhd ekeditinde aaerssqeaa ntdvlatved kathgneigl dstepegtad
      541 lqsdnpeehe temnntnaep qekplakddi eeknptiraa egedynktea vsasgdpvvv
      601 gdtpdnkile gqeqgkteld ppaestevda kpgevvggse teptsstknl edqemekesn
      661 feenlsgrnh dvenqnpmkk deeasnslsg aasslepdeh elaeictell vlecngpvks
      721 edmiipsltc qdqengfild dsvstdpvet vspdlspeag kgrdeflvee maikevsrde
      781 klelkdgdde agnglgtitt vmtdlptgig akcngelpse mnsakndsie sqnilvease
      841 teledkgmvl sqkgasveee sengnakqsh cqvqsaqeat ekpngqgsee gskdddqsal
      901 spqfmmngrq kekitcllna dcdsnkdcqf lqakilengh mvdasinhqk qqkdsqqevq
      961 lvtdssdtff mdqmnkeese ekkiieekkd snpiengkqc isqsydpieq mqgsvmaevk
     1021 qeplwdlsey pkpipltmid ttpkqcskqc angetpqvva iangdynnqr esvgrfsles
     1081 npdtinsqmr kspsfdldlr iharaedsdq tpllyqdktt iesfstqaee kantengenp
     1141 sqyesmatee kavtlersds eksrtpflgf lkedeeeade hnmlmeknpk kqgnqsatnk
     1201 tttkvstsvt tkgkvkrkpi taffgtcmcc atvtn
//
LOCUS       XP_040944078            1215 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944078
VERSION     XP_040944078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088144.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1215
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=132774
     Region          <152..415
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1215
                     /gene="LOC107927804"
                     /coded_by="XM_041088144.1:899..4546"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqeenntv dnksvqefdh adglkgqnhv vqaildtdsq tankeedekt
       61 qedaartdye qeqnhevvvs edvyvngkde keedtnmipv dkelsmiesg yeeeakgqgh
      121 lvpaaedkdt rnetesatlq hdglaspcik dgehdekeqd sstildveem plkeaartee
      181 tnaeaclvpa ggdestcgte tgqvsgdrgg keypsvdkqk pdekdetnae aclvpaggde
      241 snrgtetgqv sgdrggmeyp svdkqtpdek eeditvndet eeqssqeaas tdvldrqvql
      301 lpvvedkath gnqigfvtsd pegtadlngd npkehekeed tnmiqvdken smkeagyadd
      361 aegqdhlvpa aedtntrgne tesvslehdg lasphiedse heekeqdtst ileveeiplk
      421 eaaitdetna earlapaggd esthgtetgl vfddhdgtey pcidkqkhde keditindea
      481 aerssqeaan tdvlatvedk athgneigld stepegtadl qsdnpeehet emnntnaepq
      541 ekplakddie eknptiraae gedynkteav sasgdpvvvg dtpdnkileg qeqgkteldp
      601 paestevdak pgevvggset eptsstknle dqemekesnf eenlsgrnhd venqnpmkke
      661 deeasnslsg aasslepdeh elaeictell vlecngpvks edmiipsltc qdqengfild
      721 dsvstdpvet vspdlspeag kgrdeflvee maikevsrde klelkdgdde agnglgtitt
      781 vmtdlptgig akcngelpse mnsakndsie sqnilvease teledkgmvl sqkgasveee
      841 sengnakqsh cqvqsaqeat ekpngqgsee gskdddqsal spqfmmngrq kekitcllna
      901 dcdsnkdcqf lqakilengh mvdasinhqk qqkdsqqevq lvtdssdtff mdqmnkeese
      961 ekkiieekkd snpiengkqc isqsydpieq mqgsvmaevk qeplwdlsey pkpipltmid
     1021 ttpkqcskqc angetpqvva iangdynnqr esvgrfsles npdtinsqmr kspsfdldlr
     1081 iharaedsdq tpllyqdktt iesfstqaee kantengenp sqyesmatee kavtlersds
     1141 eksrtpflgf lkedeeeade hnmlmeknpk kqgnqsatnk tttkvstsvt tkgkvkrkpi
     1201 taffgtcmcc atvtn
//
LOCUS       XP_040944079            1215 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944079
VERSION     XP_040944079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088145.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1215
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=132711
     Region          <170..487
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1215
                     /gene="LOC107927804"
                     /coded_by="XM_041088145.1:899..4546"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqeenntv dnksvqefdh adglkgqnhv vqaildtdsq tankeedekt
       61 qedaartdye qeqnhevvvs edvyvngkde keedtnmipv dkelsmiesg yeeeakgqgh
      121 lvpaaedkdt rnetesatlq hdglaspcik dgehdekeqd sstildveem plkeaartee
      181 tnaeaclvpa ggdestcgte tgqvsgdrgg keypsvdkqk pdekeeditv ndeteeqssq
      241 eaantdetna eaclvpaggd esnrgtetgq vsgdrggmey psvdkqtpde keeditvnde
      301 teeqssqeaa stdvldrqvq llpvvedkat hgnqigfvts dpegtadlng dnpkehekdd
      361 aegqdhlvpa aedtntrgne tesvslehdg lasphiedse heekeqdtst ileveeiplk
      421 eaaitdetna earlapaggd esthgtetgl vfddhdgtey pcidkqkhde keditindea
      481 aerssqeaan tdvlatvedk athgneigld stepegtadl qsdnpeehet emnntnaepq
      541 ekplakddie eknptiraae gedynkteav sasgdpvvvg dtpdnkileg qeqgkteldp
      601 paestevdak pgevvggset eptsstknle dqemekesnf eenlsgrnhd venqnpmkke
      661 deeasnslsg aasslepdeh elaeictell vlecngpvks edmiipsltc qdqengfild
      721 dsvstdpvet vspdlspeag kgrdeflvee maikevsrde klelkdgdde agnglgtitt
      781 vmtdlptgig akcngelpse mnsakndsie sqnilvease teledkgmvl sqkgasveee
      841 sengnakqsh cqvqsaqeat ekpngqgsee gskdddqsal spqfmmngrq kekitcllna
      901 dcdsnkdcqf lqakilengh mvdasinhqk qqkdsqqevq lvtdssdtff mdqmnkeese
      961 ekkiieekkd snpiengkqc isqsydpieq mqgsvmaevk qeplwdlsey pkpipltmid
     1021 ttpkqcskqc angetpqvva iangdynnqr esvgrfsles npdtinsqmr kspsfdldlr
     1081 iharaedsdq tpllyqdktt iesfstqaee kantengenp sqyesmatee kavtlersds
     1141 eksrtpflgf lkedeeeade hnmlmeknpk kqgnqsatnk tttkvstsvt tkgkvkrkpi
     1201 taffgtcmcc atvtn
//
LOCUS       XP_016714408            1210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714408
VERSION     XP_016714408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1210
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=132244
     Region          <92..410
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1210
                     /gene="LOC107927804"
                     /coded_by="XM_016858919.2:1035..4667"
                     /db_xref="GeneID:107927804"
ORIGIN      
        1 mgnemgnnnt sgfqeenntv dnksvqefdh adglkgqnhv vqaildtdsq tankeedekt
       61 qedaartdye qeqnhevvvs edvyvngkde keedtnmipv dkelsmiesg yeeeakgqgh
      121 lvpaaedkdt rnetesatlq hdglaspcik dgehdekeqd sstildveem plkeaartee
      181 tnaeaclvpa ggdestcgte tgqvsgdrgg keypsvdkqk pdekeaclvp aggdesnrgt
      241 etgqvsgdrg gmeypsvdkq tpdekeedit vndeteeqss qeaastdvld rqvqllpvve
      301 dkathgnqig fvtsdpegta dlngdnpkeh ekeedtnmiq vdkensmkea gyaddaegqd
      361 hlvpaaedtn trgnetesvs lehdglasph iedseheeke qdtstileve eiplkeaait
      421 detnaearla paggdesthg tetglvfddh dgteypcidk qkhdekedit indeaaerss
      481 qeaantdvla tvedkathgn eigldstepe gtadlqsdnp eehetemnnt naepqekpla
      541 kddieeknpt iraaegedyn kteavsasgd pvvvgdtpdn kilegqeqgk teldppaest
      601 evdakpgevv ggseteptss tknledqeme kesnfeenls grnhdvenqn pmkkedeeas
      661 nslsgaassl epdehelaei ctellvlecn gpvksedmii psltcqdqen gfilddsvst
      721 dpvetvspdl speagkgrde flveemaike vsrdeklelk dgddeagngl gtittvmtdl
      781 ptgigakcng elpsemnsak ndsiesqnil veaseteled kgmvlsqkga sveeesengn
      841 akqshcqvqs aqeatekpng qgseegskdd dqsalspqfm mngrqkekit cllnadcdsn
      901 kdcqflqaki lenghmvdas inhqkqqkds qqevqlvtds sdtffmdqmn keeseekkii
      961 eekkdsnpie ngkqcisqsy dpieqmqgsv maevkqeplw dlseypkpip ltmidttpkq
     1021 cskqcanget pqvvaiangd ynnqresvgr fslesnpdti nsqmrkspsf dldlrihara
     1081 edsdqtplly qdkttiesfs tqaeekante ngenpsqyes mateekavtl ersdseksrt
     1141 pflgflkede eeadehnmlm eknpkkqgnq satnktttkv stsvttkgkv krkpitaffg
     1201 tcmccatvtn
//
LOCUS       XP_016714258             150 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-like protein 8 [Gossypium hirsutum].
ACCESSION   XP_016714258
VERSION     XP_016714258.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858769.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="calmodulin-like protein 8"
                     /calculated_mol_wt=16860
     Region          1..147
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..150
                     /gene="LOC107927660"
                     /coded_by="XM_016858769.2:129..581"
                     /db_xref="GeneID:107927660"
ORIGIN      
        1 mgdilseeqi vefkeafclf dkdgdgcitv eelatvirsl dqnpteeelq dmitevdadg
       61 ngtiefaefl nlmakkmket daeeelkeaf kvfdkdqngy isanelrhvm inlgekltde
      121 eveqmikead ldgdgqvnyd efvkmmttvg
//
LOCUS       XP_016714399             340 aa            linear   PLN 06-AUG-2024
DEFINITION  2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016714399
VERSION     XP_016714399.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858910.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="2-methyl-6-phytyl-1,4-hydroquinone
                     methyltransferase, chloroplastic isoform X1"
                     /calculated_mol_wt=38444
     Region          1..340
                     /region_name="PLN02490"
                     /note="MPBQ/MSBQ methyltransferase"
                     /db_xref="CDD:215270"
     CDS             1..340
                     /gene="LOC107927797"
                     /coded_by="XM_016858910.2:204..1226"
                     /db_xref="GeneID:107927797"
ORIGIN      
        1 massmlngte ylklingvtp sglgflgsnf hfkglsqkgl lcytknqktr ilaprcslss
       61 srpasqprfi qhkkeafwfy rflsivydhi inpghwtedm rdealepadl ysrnmtvvdv
      121 gggtgfttlg ivkhvdaknv tildqsphql akakqkeplk eckiiegdae dlpfptdyad
      181 ryvsagsiey wpdpqrgike ayrvlkiggk acvigpvypt fwlsrffadm wmlfpkeeey
      241 iewfekagfk dvklkrigpk wyrgvrrhgf imgcsvtgvk plsgdsplkl spkaedvkkp
      301 vnpfvflfrf migaiaatyf vlvpiymwlk dqivpkgqpi
//
LOCUS       XP_016714400             290 aa            linear   PLN 06-AUG-2024
DEFINITION  2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016714400
VERSION     XP_016714400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..290
                     /product="2-methyl-6-phytyl-1,4-hydroquinone
                     methyltransferase, chloroplastic isoform X2"
                     /calculated_mol_wt=32711
     Region          1..289
                     /region_name="PLN02490"
                     /note="MPBQ/MSBQ methyltransferase"
                     /db_xref="CDD:215270"
     CDS             1..290
                     /gene="LOC107927797"
                     /coded_by="XM_016858911.2:204..1076"
                     /db_xref="GeneID:107927797"
ORIGIN      
        1 massmlngte ylklingvtp sglgflgsnf hfkglsqkgl lcytknqktr ilaprcslss
       61 srpasqprfi qhkkeafwfy rflsivydhi inpghwtedm rdealepadl ysrnmtvvdv
      121 gggtgfttlg ivkhvdaknv tildqsphql akakqkeplk eckiiegdae dlpfptdyad
      181 ryvsagsiey wpdpqrgike ayrvlkiggk acvigpvypt fwlsrffadm wmlfpkeeey
      241 iewfekagfk dvklkrigpk wyrgvrrhgf imgcsvtgvk plsgdsplks
//
LOCUS       XP_016714401             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714401
VERSION     XP_016714401.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714401.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13185
     Region          54..>84
                     /region_name="Pet100"
                     /note="pfam09803"
                     /db_xref="CDD:462908"
     CDS             1..119
                     /gene="LOC107927798"
                     /coded_by="XM_016858912.2:8..367"
                     /db_xref="GeneID:107927798"
ORIGIN      
        1 msplayllld kdmtypkvcs aasmvlttnf lpnspsnfpg kikmsslgts kgvleiakfg
       61 lyvtipivlm ytfanntknl qkfmgnrsyv vyppegprpp speelremar elarkknnh
//
LOCUS       XP_016714402              96 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016714402
VERSION     XP_016714402.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858913.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714402.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..96
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=10684
     Region          31..>61
                     /region_name="Pet100"
                     /note="pfam09803"
                     /db_xref="CDD:462908"
     CDS             1..96
                     /gene="LOC107927798"
                     /coded_by="XM_016858913.2:16..306"
                     /db_xref="GeneID:107927798"
ORIGIN      
        1 mvlttnflpn spsnfpgkik msslgtskgv leiakfglyv tipivlmytf anntknlqkf
       61 mgnrsyvvyp pegprppspe elremarela rkknnh
//
LOCUS       XP_016714222             462 aa            linear   PLN 06-AUG-2024
DEFINITION  CBL-interacting serine/threonine-protein kinase 7 [Gossypium
            hirsutum].
ACCESSION   XP_016714222
VERSION     XP_016714222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858733.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="CBL-interacting serine/threonine-protein kinase
                     7"
                     /calculated_mol_wt=51049
     Region          48..304
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(55..58,61,63,77,79,112,128..131,174,178..179,181,
                     191..192)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          340..450
                     /region_name="CIPK_C"
                     /note="C-terminal regulatory domain of Calcineurin B-Like
                     (CBL)-interacting protein kinases; cd12195"
                     /db_xref="CDD:213380"
     Site            order(340..348,351..357,363..366,368..370,372,428)
                     /site_type="other"
                     /note="CBL interaction site [polypeptide binding]"
                     /db_xref="CDD:213380"
     Site            368..369
                     /site_type="other"
                     /note="putative PP2C binding site [polypeptide binding]"
                     /db_xref="CDD:213380"
     CDS             1..462
                     /gene="LOC107927620"
                     /coded_by="XM_016858733.2:92..1480"
                     /db_xref="GeneID:107927620"
ORIGIN      
        1 mpsgaqppms ppasppslps qqtppepppp pplkitrtkt ptgillgkyq lgrllgrgsf
       61 akvheatsld ddntvvavki idktktvdaa mepriirevs amrrlqhhpn ilkihevmat
      121 ktkiylvmel asggelftkv lrrgrldepv arryfsqlvs alhfchqngv ahrdvkpqnl
      181 lldrngnlkv sdfglsalpe qlndgllhta cgtpaytape vvrrkgydgs kadawscgvi
      241 lfvllagylp fddsnlaamy ekihrrefqf pawvskqakg viwqlldpnp ktrmtmvklm
      301 etswfkrtvt tlrpslsdnh leslmqdkkl khnmscngvn afdiismssg ldlsglfegg
      361 vnkrkekryt ttsmeldgam ervreigerl gyrvekgksg vvglgkgrvv vvvevmevae
      421 lfvlvevkmv esggvefeeg qwldleaglg nifiswdnta lg
//
LOCUS       XP_016714238             190 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein IAA4 [Gossypium hirsutum].
ACCESSION   XP_016714238
VERSION     XP_016714238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858749.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="auxin-responsive protein IAA4"
                     /calculated_mol_wt=21032
     Region          15..187
                     /region_name="AUX_IAA"
                     /note="AUX/IAA family; pfam02309"
                     /db_xref="CDD:460529"
     CDS             1..190
                     /gene="LOC107927641"
                     /coded_by="XM_016858749.2:227..799"
                     /db_xref="GeneID:107927641"
ORIGIN      
        1 megsvgydnd lnlkatelrl glpgtepvsi vrrnkrslqq vadddcgvng cksddqneta
       61 ppppkaqivg wppirsyrkn niqtkknese gggiyvkvsm dgapylrkid lkvysgypel
      121 lqaienmfkf tigeysereg ykgsdyapty edkdgdwmlv gdvpwgmfit sckrlrimkg
      181 searglgrgv
//
LOCUS       XP_016714255             250 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein IAA14 [Gossypium hirsutum].
ACCESSION   XP_016714255
VERSION     XP_016714255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858766.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..250
                     /product="auxin-responsive protein IAA14"
                     /calculated_mol_wt=26827
     Region          12..241
                     /region_name="AUX_IAA"
                     /note="AUX/IAA family; pfam02309"
                     /db_xref="CDD:460529"
     CDS             1..250
                     /gene="LOC107927655"
                     /coded_by="XM_016858766.2:103..855"
                     /db_xref="GeneID:107927655"
ORIGIN      
        1 mlgterdlnf netelclglp ggsgggggaa aaggggknev esspkttgkr gysetvdlkl
       61 nlqskegcmd lnqnlengsk eknhlpakpp akaqvlgwpp vrsyrknima nqknnsdeis
      121 drassgsgsg gaafvkvcma gapylrkvdl kmynsyqkls dalakmfssf tmgsygcegm
      181 idfmnesklm dllnssdyvp tyedkdgdwm lvgdvpwemf vdsckrlrim kgseaiglap
      241 ramekcksra
//
LOCUS       XP_016714236             227 aa            linear   PLN 06-AUG-2024
DEFINITION  sec-independent protein translocase protein TatB [Gossypium
            hirsutum].
ACCESSION   XP_016714236
VERSION     XP_016714236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858747.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="sec-independent protein translocase protein
                     TatB"
                     /calculated_mol_wt=24376
     Region          2..68
                     /region_name="TatA_B_E"
                     /note="mttA/Hcf106 family; cl00788"
                     /db_xref="CDD:445098"
     CDS             1..227
                     /gene="LOC107927638"
                     /coded_by="XM_016858747.2:483..1166"
                     /db_xref="GeneID:107927638"
ORIGIN      
        1 mfgisygelf lligataalv gpkdlpkiak vagrfagrsi gyvqlargqf dnamqqsqar
       61 qvtkelqdtm aqldairhei rslslmnpgp itrrlmenpp elasdsngtv psekceedkn
      121 sadamkkdht pkssastdlh skatayarla eseavkagsg rfsvedenln yeigdfsvlp
      181 vsaesagllp drkesakgsd lvleavveae vahnakeffs lpqnqiq
//
LOCUS       XP_040944080             609 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g63330 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944080
VERSION     XP_040944080.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088146.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..609
                     /product="pentatricopeptide repeat-containing protein
                     At1g63330 isoform X1"
                     /calculated_mol_wt=67728
     Region          <65..>475
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          94..121
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          129..156
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          164..191
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          199..226
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          234..261
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          267..296
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          302..330
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          337..366
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          372..401
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          407..433
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          442..470
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          475..524
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          479..506
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          511..559
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          512..541
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          545..>582
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          547..576
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..609
                     /gene="LOC107927775"
                     /coded_by="XM_041088146.1:164..1993"
                     /db_xref="GeneID:107927775"
ORIGIN      
        1 mllksktysn havqgttkal sslsslftkd plqssslipk prvqnprkpl llcpnefeyf
       61 vrrqcksgki tlndaltyfn kklnvegika nlytlsilmn scgqlkqmss gfcvfgeiik
      121 rgfepdlvtv sillkgmcad gkvldavqvf dkmcergfqg dgviygilin glcfighpgm
      181 alelhrkmen sscqgtlltf smvidafckd gvvdeaasvf semvskqisp davvygslih
      241 gfcglgrlke avnvfdemvs rgltpdlimy ntfihgfcqv gmwgeavkif nrmvengisp
      301 dvvtfttlid slgkegktge aqrifdlmir qgakpdirty nsllsglcsn ghldeatklf
      361 glivdqglel dafsynimis gyckswkmde afelfqkmhd nvikptivty ntligmlfqe
      421 gqvstaqkmf nemhvygqsp alstytvmld glckhghiee aldlfhsles tnkkpsiehf
      481 silidgmwra gkseearkmf teisekglsl dvvtynimls glckqsmsle ankllmemee
      541 kgcvpdsisf ntlihgllre kevekamnrl eemrrrnfsa degvtslllr lamkdkqcra
      601 aleslpdvi
//
LOCUS       XP_040944081             531 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g12300,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944081
VERSION     XP_040944081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088147.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..531
                     /product="pentatricopeptide repeat-containing protein
                     At1g12300, mitochondrial isoform X2"
                     /calculated_mol_wt=59007
     Region          <14..>397
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          16..43
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          51..78
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          86..113
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          121..148
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          156..183
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          189..218
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          224..252
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          259..288
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          294..323
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          329..355
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          364..392
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          397..446
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          401..428
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          433..481
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          434..463
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          467..>504
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          469..498
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..531
                     /gene="LOC107927775"
                     /coded_by="XM_041088147.1:423..2018"
                     /db_xref="GeneID:107927775"
ORIGIN      
        1 myrklnvegi kanlytlsil mnscgqlkqm ssgfcvfgei ikrgfepdlv tvsillkgmc
       61 adgkvldavq vfdkmcergf qgdgviygil inglcfighp gmalelhrkm ensscqgtll
      121 tfsmvidafc kdgvvdeaas vfsemvskqi spdavvygsl ihgfcglgrl keavnvfdem
      181 vsrgltpdli myntfihgfc qvgmwgeavk ifnrmvengi spdvvtfttl idslgkegkt
      241 geaqrifdlm irqgakpdir tynsllsglc snghldeatk lfglivdqgl eldafsynim
      301 isgyckswkm deafelfqkm hdnvikptiv tyntligmlf qegqvstaqk mfnemhvygq
      361 spalstytvm ldglckhghi eealdlfhsl estnkkpsie hfsilidgmw ragkseeark
      421 mfteisekgl sldvvtynim lsglckqsms leankllmem eekgcvpdsi sfntlihgll
      481 rekevekamn rleemrrrnf sadegvtsll lrlamkdkqc raaleslpdv i
//
LOCUS       XP_016714377             511 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g62930,
            chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016714377
VERSION     XP_016714377.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858888.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="pentatricopeptide repeat-containing protein
                     At1g62930, chloroplastic isoform X3"
                     /calculated_mol_wt=56685
     Region          <1..>377
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          1..23
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          31..58
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          66..93
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          101..128
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          136..163
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          169..198
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          204..232
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          239..268
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          274..303
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          309..335
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          344..372
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          377..426
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          381..408
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          413..461
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          414..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..>484
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          449..478
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..511
                     /gene="LOC107927775"
                     /coded_by="XM_016858888.2:341..1876"
                     /db_xref="GeneID:107927775"
ORIGIN      
        1 mnscgqlkqm ssgfcvfgei ikrgfepdlv tvsillkgmc adgkvldavq vfdkmcergf
       61 qgdgviygil inglcfighp gmalelhrkm ensscqgtll tfsmvidafc kdgvvdeaas
      121 vfsemvskqi spdavvygsl ihgfcglgrl keavnvfdem vsrgltpdli myntfihgfc
      181 qvgmwgeavk ifnrmvengi spdvvtfttl idslgkegkt geaqrifdlm irqgakpdir
      241 tynsllsglc snghldeatk lfglivdqgl eldafsynim isgyckswkm deafelfqkm
      301 hdnvikptiv tyntligmlf qegqvstaqk mfnemhvygq spalstytvm ldglckhghi
      361 eealdlfhsl estnkkpsie hfsilidgmw ragkseeark mfteisekgl sldvvtynim
      421 lsglckqsms leankllmem eekgcvpdsi sfntlihgll rekevekamn rleemrrrnf
      481 sadegvtsll lrlamkdkqc raaleslpdv i
//
LOCUS       XP_016714378             234 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH92 [Gossypium hirsutum].
ACCESSION   XP_016714378
VERSION     XP_016714378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858889.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="transcription factor bHLH92"
                     /calculated_mol_wt=27258
     Region          87..>124
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(91..92,94,99,116..117)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381399"
     CDS             1..234
                     /gene="LOC107927776"
                     /coded_by="XM_016858889.2:404..1108"
                     /db_xref="GeneID:107927776"
ORIGIN      
        1 mdelikqllg ehgtiwyett pvlqpvrpsa fqpyprtprt epwleaagcn ngvrsgnvnk
       61 rmieflrktn wvsviskdkq kqrclkhmmn ertrrekqkk cyfalysmlp lgtkndknsi
      121 vqmatmrvre lemereelqr rnsellvnlg gnannegaki rariddpsyg ndymlevlkc
      181 lktldskprm irttvynqel vldlatkmka advenainrt lqeverklee rrtr
//
LOCUS       XP_016714379             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g34160 [Gossypium hirsutum].
ACCESSION   XP_016714379
VERSION     XP_016714379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858890.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..183
                     /product="uncharacterized protein At2g34160"
                     /calculated_mol_wt=19908
     Region          87..>130
                     /region_name="Alba"
                     /note="pfam01918"
                     /db_xref="CDD:426509"
     CDS             1..183
                     /gene="LOC107927777"
                     /coded_by="XM_016858890.2:105..656"
                     /db_xref="GeneID:107927777"
ORIGIN      
        1 mestvaeevs espmaqeevk neatiiagdd gnmengknpv lvavvataev asiispaktv
       61 espqeiknmk nekkkkqkke vqvsntkkpf ifylnrakry inefnevelc glgmaiptvv
      121 tiaeilkrng faiqkgimts tvlstqedrk grqiekakie ivlgkaekfg amnavvtpkk
      181 aad
//
LOCUS       XP_016714380             152 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S15-4 [Gossypium hirsutum].
ACCESSION   XP_016714380
VERSION     XP_016714380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858891.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="40S ribosomal protein S15-4"
                     /calculated_mol_wt=17121
     Region          10..150
                     /region_name="PTZ00096"
                     /note="40S ribosomal protein S15; Provisional"
                     /db_xref="CDD:185442"
     CDS             1..152
                     /gene="LOC107927778"
                     /coded_by="XM_016858891.2:149..607"
                     /db_xref="GeneID:107927778"
ORIGIN      
        1 madvetevaa agvpkkrtfk kfsfrgvdld alldmstdel vklfpararr rfrrglkrkp
       61 malikklrka kreappgekp epvrthlrnm iivpemigsi igvyngktfn qveikpemis
      121 hylaefsisy kpvkhgrpgi gathssrfip lk
//
LOCUS       XP_016714299             750 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein G2 [Gossypium hirsutum].
ACCESSION   XP_016714299
VERSION     XP_016714299.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858810.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714299.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..750
                     /product="cellulose synthase-like protein G2"
                     /calculated_mol_wt=85530
     Region          1..747
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..750
                     /gene="LOC107927704"
                     /coded_by="XM_016858810.2:133..2385"
                     /db_xref="GeneID:107927704"
ORIGIN      
        1 macssstslp lhichgnklt miinrshavl hsiaisfliy yrafflfhqp tpiiipwlll
       61 fiselllsfi wflgrayiwr pvyrtvfper lpnddklpai dvficttgpd keptigvmnt
      121 llsamaldyp pdklhvylsd dggyaitlha mreswsfarw wlpfcrrfgi ktrcpeayfs
      181 rtenhdsdsk ypdnfmvere kikeqyvlfk ervrragqes kfkdkgvyta tdhpscievm
      241 eenskeglle dqtiempllv yvsrekstsq fhhfkagavn vllrvsamls nspyilmldc
      301 dmycsdptsa rqamcfhfdp emspslafvq fpqafrdise ndiydsevrs aytilwpgld
      361 glkgpvlsgt nfyikrealc chsikkdidl relkdsfgps nefikslrqd ykkpnlndng
      421 easnmlleea kvlascsyed htkwgkevgf lydsvaedfl tgfvmqckgw issyvapsss
      481 srpqflgtst tnlndlltqg trwgsglvdv alsrfsplfy gssrtsflhs mgyaelslfp
      541 llyclplwcf atipplylln giplypevsd pyfsiflfif lsslskhlhe vvvtgrpisk
      601 wineqriwmi ksvtchlygs ldailkkfdl rkasflttnk vadneqikly rggkfdfrts
      661 tifvaplvtv mlvnlasivg gvyrimftgt dwrkmfgqvl lsfyiivmny vviegmvlrk
      721 dkgriplyvn vlsivfslif lslgsiiisn
//
LOCUS       XP_016714245             330 aa            linear   PLN 06-AUG-2024
DEFINITION  FHA domain-containing protein At4g14490 [Gossypium hirsutum].
ACCESSION   XP_016714245
VERSION     XP_016714245.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858756.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714245.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..330
                     /product="FHA domain-containing protein At4g14490"
                     /calculated_mol_wt=37153
     Region          6..102
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(31..32,47..48,50,69..70)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     CDS             1..330
                     /gene="LOC107927648"
                     /coded_by="XM_016858756.2:124..1116"
                     /db_xref="GeneID:107927648"
ORIGIN      
        1 mdpppitllm vqgprkdetf vfhpgsairi grvmrgnnlp ikdagisskh ltiesvsgkw
       61 ilrdlgssng ttlnsnvlpt etafdlhdgd tvklgettsi likiegsggs geevavvves
      121 rrknpprrgk aaknetgssn kelenlelek kenvrvtrsr knedsqncrl dipkvpenre
      181 aaakrgkgrr ggrkkneqee kleqketklt enddtliike evdkeeealn plqneefqvr
      241 ndeenvehsk igvkescdem enevrescde rvevdlekmt lrqwfdylea hlpkqileat
      301 eemiegmrkk aqkvqeymve qkkkgkaavg
//
LOCUS       XP_040944083            1129 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944083
VERSION     XP_040944083.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088149.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1129
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X1"
                     /calculated_mol_wt=124966
     Region          63..185
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(110,156..158)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          519..>898
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1129
                     /gene="LOC107927780"
                     /coded_by="XM_041088149.1:168..3557"
                     /db_xref="GeneID:107927780"
ORIGIN      
        1 magvsteefg vggsvegvsr sgealvewrs seqvengtps tsppfwdsdd dddgglkpse
       61 lygkytwkie nfsqinkrel rsnafevgsy kwyiliypqg cdvcnhlslf lcvanhdkll
      121 pgwghfaqft iavvnkdpkk skysdtlhrf wkkehdwgwk kfmelskvyd gfiesdtlii
      181 kaqvqvikek adhpfrcldc qyrrelvrvy ltnveqicrr flddrrqmlg rligdkarwl
      241 sfrafwlgid qnnrhgmske ktdvilkvvv khfftekevt stlvmdslys glkalkgqsk
      301 skkvkskvfd aeempapivh iekdmfllvd dvllllerat leplppkdek gpqnrtkdgn
      361 sgenlnknsi erderrltel grrtveifvl ahifsnkiea ayqeaialrr qeelireeaa
      421 llaeseqkak qgasekekks kkkqakqkrn nrkskdkgre ekaivaiqek hqegqpedgk
      481 easmmveqqp vcekadvlgd vsdvsdsvdg aievfphdsv dkeaspvncd tdtleihppi
      541 gssssgitgl scvqngvadk kspsimedss smcltdslss avmspykgns fsnnhnkksp
      601 srgkdhqskt ssdgnilike fgnpsscpal eagdrndvsq sskagesvse atipslsdqr
      661 kwverdavrk eevllqkkpi iqdpvdlerp kekttaipss prspprsppp taqfrseyrs
      721 sgsvgsipvr ktssnglqrs dlpapsstsf qmngllkset qkpatlkpte kattpqepmm
      781 srpssaplvp gprptapvvs lvqatpliah ttstagclgp dssaatsyvp qsyrnaimgn
      841 hvassssdft hpnspssgvn plpaysqtpp lvstpvyipq ssdriepnsv qsdipfgmvd
      901 rnimlnasqw mdksqrdgtr smhldhsssl seiqnlnlyk slyngsrehf snefpsctsg
      961 rqsqcvlade fphldiindl ldeehnvgsi grtggfhvls ngshllsshf sfpsnlgmsg
     1021 emgsscgscr feqarsyhdd glqhsfksss gnhidtpref tpqtnvqpyt ngqidglvqt
     1081 qwpmasahls llqmrntngd sypyynakyp nlacgvngya tvfrpsngq
//
LOCUS       XP_040944084            1029 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944084
VERSION     XP_040944084.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088150.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1029
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X2"
                     /calculated_mol_wt=113952
     Region          <22..85
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Region          419..>798
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1029
                     /gene="LOC107927780"
                     /coded_by="XM_041088150.1:144..3233"
                     /db_xref="GeneID:107927780"
ORIGIN      
        1 mfatisrcfs vllimtnffq tgwghfaqft iavvnkdpkk skysdtlhrf wkkehdwgwk
       61 kfmelskvyd gfiesdtlii kaqvqvikek adhpfrcldc qyrrelvrvy ltnveqicrr
      121 flddrrqmlg rligdkarwl sfrafwlgid qnnrhgmske ktdvilkvvv khfftekevt
      181 stlvmdslys glkalkgqsk skkvkskvfd aeempapivh iekdmfllvd dvllllerat
      241 leplppkdek gpqnrtkdgn sgenlnknsi erderrltel grrtveifvl ahifsnkiea
      301 ayqeaialrr qeelireeaa llaeseqkak qgasekekks kkkqakqkrn nrkskdkgre
      361 ekaivaiqek hqegqpedgk easmmveqqp vcekadvlgd vsdvsdsvdg aievfphdsv
      421 dkeaspvncd tdtleihppi gssssgitgl scvqngvadk kspsimedss smcltdslss
      481 avmspykgns fsnnhnkksp srgkdhqskt ssdgnilike fgnpsscpal eagdrndvsq
      541 sskagesvse atipslsdqr kwverdavrk eevllqkkpi iqdpvdlerp kekttaipss
      601 prspprsppp taqfrseyrs sgsvgsipvr ktssnglqrs dlpapsstsf qmngllkset
      661 qkpatlkpte kattpqepmm srpssaplvp gprptapvvs lvqatpliah ttstagclgp
      721 dssaatsyvp qsyrnaimgn hvassssdft hpnspssgvn plpaysqtpp lvstpvyipq
      781 ssdriepnsv qsdipfgmvd rnimlnasqw mdksqrdgtr smhldhsssl seiqnlnlyk
      841 slyngsrehf snefpsctsg rqsqcvlade fphldiindl ldeehnvgsi grtggfhvls
      901 ngshllsshf sfpsnlgmsg emgsscgscr feqarsyhdd glqhsfksss gnhidtpref
      961 tpqtnvqpyt ngqidglvqt qwpmasahls llqmrntngd sypyynakyp nlacgvngya
     1021 tvfrpsngq
//
LOCUS       XP_016714382            1029 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016714382
VERSION     XP_016714382.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858893.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714382.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1029
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X2"
                     /calculated_mol_wt=113952
     Region          <22..85
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Region          419..>798
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1029
                     /gene="LOC107927780"
                     /coded_by="XM_016858893.2:158..3247"
                     /db_xref="GeneID:107927780"
ORIGIN      
        1 mfatisrcfs vllimtnffq tgwghfaqft iavvnkdpkk skysdtlhrf wkkehdwgwk
       61 kfmelskvyd gfiesdtlii kaqvqvikek adhpfrcldc qyrrelvrvy ltnveqicrr
      121 flddrrqmlg rligdkarwl sfrafwlgid qnnrhgmske ktdvilkvvv khfftekevt
      181 stlvmdslys glkalkgqsk skkvkskvfd aeempapivh iekdmfllvd dvllllerat
      241 leplppkdek gpqnrtkdgn sgenlnknsi erderrltel grrtveifvl ahifsnkiea
      301 ayqeaialrr qeelireeaa llaeseqkak qgasekekks kkkqakqkrn nrkskdkgre
      361 ekaivaiqek hqegqpedgk easmmveqqp vcekadvlgd vsdvsdsvdg aievfphdsv
      421 dkeaspvncd tdtleihppi gssssgitgl scvqngvadk kspsimedss smcltdslss
      481 avmspykgns fsnnhnkksp srgkdhqskt ssdgnilike fgnpsscpal eagdrndvsq
      541 sskagesvse atipslsdqr kwverdavrk eevllqkkpi iqdpvdlerp kekttaipss
      601 prspprsppp taqfrseyrs sgsvgsipvr ktssnglqrs dlpapsstsf qmngllkset
      661 qkpatlkpte kattpqepmm srpssaplvp gprptapvvs lvqatpliah ttstagclgp
      721 dssaatsyvp qsyrnaimgn hvassssdft hpnspssgvn plpaysqtpp lvstpvyipq
      781 ssdriepnsv qsdipfgmvd rnimlnasqw mdksqrdgtr smhldhsssl seiqnlnlyk
      841 slyngsrehf snefpsctsg rqsqcvlade fphldiindl ldeehnvgsi grtggfhvls
      901 ngshllsshf sfpsnlgmsg emgsscgscr feqarsyhdd glqhsfksss gnhidtpref
      961 tpqtnvqpyt ngqidglvqt qwpmasahls llqmrntngd sypyynakyp nlacgvngya
     1021 tvfrpsngq
//
LOCUS       XP_016714383             967 aa            linear   PLN 06-AUG-2024
DEFINITION  TNF receptor-associated factor homolog 1b isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016714383
VERSION     XP_016714383.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858894.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714383.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..967
                     /product="TNF receptor-associated factor homolog 1b
                     isoform X3"
                     /calculated_mol_wt=106481
     Region          357..>736
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <601..735
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..967
                     /gene="LOC107927780"
                     /coded_by="XM_016858894.2:291..3194"
                     /db_xref="GeneID:107927780"
ORIGIN      
        1 melskvydgf iesdtliika qvqvikekad hpfrcldcqy rrelvrvylt nveqicrrfl
       61 ddrrqmlgrl igdkarwlsf rafwlgidqn nrhgmskekt dvilkvvvkh fftekevtst
      121 lvmdslysgl kalkgqsksk kvkskvfdae empapivhie kdmfllvddv lllleratle
      181 plppkdekgp qnrtkdgnsg enlnknsier derrltelgr rtveifvlah ifsnkieaay
      241 qeaialrrqe elireeaall aeseqkakqg asekekkskk kqakqkrnnr kskdkgreek
      301 aivaiqekhq egqpedgkea smmveqqpvc ekadvlgdvs dvsdsvdgai evfphdsvdk
      361 easpvncdtd tleihppigs sssgitglsc vqngvadkks psimedsssm cltdslssav
      421 mspykgnsfs nnhnkkspsr gkdhqsktss dgnilikefg npsscpalea gdrndvsqss
      481 kagesvseat ipslsdqrkw verdavrkee vllqkkpiiq dpvdlerpke kttaipsspr
      541 spprspppta qfrseyrssg svgsipvrkt ssnglqrsdl papsstsfqm ngllksetqk
      601 patlkpteka ttpqepmmsr pssaplvpgp rptapvvslv qatpliahtt stagclgpds
      661 saatsyvpqs yrnaimgnhv assssdfthp nspssgvnpl paysqtpplv stpvyipqss
      721 driepnsvqs dipfgmvdrn imlnasqwmd ksqrdgtrsm hldhssslse iqnlnlyksl
      781 yngsrehfsn efpsctsgrq sqcvladefp hldiindlld eehnvgsigr tggfhvlsng
      841 shllsshfsf psnlgmsgem gsscgscrfe qarsyhddgl qhsfksssgn hidtpreftp
      901 qtnvqpytng qidglvqtqw pmasahlsll qmrntngdsy pyynakypnl acgvngyatv
      961 frpsngq
//
LOCUS       XP_016714257             652 aa            linear   PLN 06-AUG-2024
DEFINITION  cellulose synthase-like protein G2 [Gossypium hirsutum].
ACCESSION   XP_016714257
VERSION     XP_016714257.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858768.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714257.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..652
                     /product="cellulose synthase-like protein G2"
                     /calculated_mol_wt=74899
     Region          5..650
                     /region_name="PLN02893"
                     /note="Cellulose synthase-like protein"
                     /db_xref="CDD:215483"
     CDS             1..652
                     /gene="LOC107927657"
                     /coded_by="XM_016858768.2:55..2013"
                     /db_xref="GeneID:107927657"
ORIGIN      
        1 meapppyslc npnkkstiin rsyallhsva itslifyrls sffhstpslp lllaftseli
       61 lsvlwllsqa flwrpftrqt fperllqdkn ddelpaidvf ictadpekep plevmntvls
      121 amamdypaek lsvyvsddgg cgltlyamke awefgrywvp fctrfgiktr cpklyfsryd
      181 deflgqgyea ekekiklkyk lmekkvqkae sngkmlaefn tknhpahvev mqdeshnand
      241 tnqvkmprlv yvsreknpsy hhhfkagaln vllrvsnmis nspyilvldc dmrcndptsa
      301 kqamcfhldp kinsnlafvq fpqkfhnlsk mdiydgqlrs tflvkwpgmd glqgpmlsgs
      361 gfymkrkaly rdivqedtdf tqlkqylgps nelvkslksa kyntdvtsrl leetrflasc
      421 kyeegtqrgk qvgflymsll edyftgfnlh cegwksifyn ppspaflgta ttklndtllq
      481 gsrwncgalq vtfskfcpli yglksrmsll qrmcyvylsl qpfyffpiwc laiipqlcll
      541 hgiplypkvs nswfmvfsyi fimsqlkhle evlltgdpir twwneqriwm mkaiisytig
      601 mlnavlkllg lkeanfiptn kaaddeqitf yqkglfnfqa stvvltplit lv
//
LOCUS       XP_040944086             171 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional regulator SUPERMAN [Gossypium hirsutum].
ACCESSION   XP_040944086
VERSION     XP_040944086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088152.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="transcriptional regulator SUPERMAN"
                     /calculated_mol_wt=19227
     Region          22..46
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..171
                     /gene="LOC121203032"
                     /coded_by="XM_041088152.1:951..1466"
                     /db_xref="GeneID:121203032"
ORIGIN      
        1 matnqgfeed ylsgfswppr sytcsfcerg frsaqalggh mnvhrrdkar lrqlpppmdh
       61 hgqspflnln lnlnfnpnpn fsssslvssp lpcemkkwlv netvvdstds tsmkgakplf
      121 gvkefkdygc nnkfmkkkkk nvsldldldl emgvvsdske dldlelrlgy t
//
LOCUS       XP_040944087             763 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene receptor 2 [Gossypium hirsutum].
ACCESSION   XP_040944087
VERSION     XP_040944087.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088153.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..763
                     /product="ethylene receptor 2"
                     /calculated_mol_wt=85015
     Region          182..330
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          316..>513
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          472..606
                     /region_name="HATPase_ETR2_ERS2-EIN4-like"
                     /note="Histidine kinase-like ATPase domain of Arabidopsis
                     thaliana ETR2, ERS2, and EIN4, and related domains;
                     cd16938"
                     /db_xref="CDD:340415"
     Site            order(489,493,496,540,542,545,547..548,572..575,591,593,
                     599..600,602)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340415"
     Site            order(560,575)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340415"
     Region          637..752
                     /region_name="REC_ETR-like"
                     /note="phosphoacceptor receiver (REC) domain of plant
                     ethylene receptors ETR1, ETR2, and EIN4, and similar
                     proteins; cd19933"
                     /db_xref="CDD:381160"
     CDS             1..763
                     /gene="LOC121214464"
                     /coded_by="XM_041088153.1:750..3041"
                     /db_xref="GeneID:121214464"
ORIGIN      
        1 mlkavapgll isslliavsr adngfarcnc ddeggfwsie siletqrasd fliavayfsi
       61 piellyfvsc snvpfkwvlf qfiafivlcg lthllngwsy gphpfqlmla ltvfkiltal
      121 vscataisll tliplllkvk vrelllkkka wdlgkevgii mkqketglhv rmltqeirks
      181 ldrhnilhtt lvelsktlgl qncavwmpne iktemnlthd lkgrnysynf tipitepdva
      241 rikrsdgvhi lkpdstlata snaedgepgp vaairlpmlr icnfkggtpe qvqtyfsilv
      301 cvlpndqrrs wcnqeleivk vvadqvavai shaavleesq lmrdklaeqn ralqlsrqna
      361 mrasqarnaf qkvmsdgmrr pmhsilglls mlqdgnlndd qriivdsmmk tstvlstlin
      421 damdisimdt arsplekrsf rlhsmikeaa clakclsvyq gfgfsievek slpdlifgde
      481 rrvfqvilhm fgslldgntg ggtvilrvya engsqepndq rratwrhyps dadllvrfei
      541 misnnisqqe dcslsevsss rsrynsrgae erlsfnicek lvqmmhgnmw viqnplgsaq
      601 smavvirfqi rpsitttite sgessdqprs nsifhglhvl ladddtvnra vtgklleklg
      661 civsvvssgf eclsaigstt spfqivilel qmpeldgfev atrickfrsr srpliiamta
      721 sidqdiwerc sqigmngviq kpvllheiaa elhkvviqan rvf
//
LOCUS       XP_016714256             295 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 20 [Gossypium hirsutum].
ACCESSION   XP_016714256
VERSION     XP_016714256.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858767.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714256.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..295
                     /product="AT-hook motif nuclear-localized protein 20"
                     /calculated_mol_wt=30328
     Region          98..209
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     CDS             1..295
                     /gene="LOC107927656"
                     /coded_by="XM_016858767.2:349..1236"
                     /db_xref="GeneID:107927656"
ORIGIN      
        1 manpwwvnqv slqgmdpagn spgldkrdle ismndmgksr nnvggdeedd drdtgdepke
       61 gaveignrrp rgrppgsknk pkppifvtrd spnalrshvm evasgsdvae siaqfarrrq
      121 rgvcvlsgsg svanvtlrqp aapgavvalq grfeilsltg aflpgpappg stgltvylag
      181 gqgqvvggsv vgslvaagpv mviaatfana tyerlpvved eeeavsgggg ghgdqihgga
      241 tnspptirsg gsgpqsglld psslpmynlp pnlvsnggtq lghetygwvh grqpy
//
LOCUS       XP_040944088             596 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSK SIMULATOR 1 [Gossypium hirsutum].
ACCESSION   XP_040944088
VERSION     XP_040944088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088154.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..596
                     /product="protein PSK SIMULATOR 1"
                     /calculated_mol_wt=67071
     Region          47..103
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          426..514
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..596
                     /gene="LOC121214466"
                     /coded_by="XM_041088154.1:203..1993"
                     /db_xref="GeneID:121214466"
ORIGIN      
        1 mvaetwihkl gsqvssnlkh aflldpsskk kntqnnptsk khetvgilsf evanvmskti
       61 hlhkslsepe vsklkfeiln sqgisnliss denyllslvl aekldelnkv anvvsrlgkk
      121 cnepaltgfe hvygdvingv idvrelgflv kdmdgmvkkm esyvnstanl ynemevlnel
      181 eqgskkfqan pheeskrafe qkliwqkqdv rhlknvslwn qtfdkvvell vrtvctvfar
      241 ilvvfgessl rkdsefgrvn ggfrdrddvv vsrhlkrvls ksssvgsvqp gnvtekrgvt
      301 lkhrgidsrk gefglfrved fgfacgtspg rfftdclsln csvsrygdng nddgnvgcdn
      361 rssqisgccs vandgpkrer qnsspflqsq csvllnenqr ksnfgvlnna qfgpksrlav
      421 yaspstvggs alalhyanvv iviekllryp hlvgeeardd lyqmlptslr lslrtnlksy
      481 vknlaiydap lahdwketld gilhwlapma hnmirwqser nfeqqqivtr tnvlllqtly
      541 fadrekieaa icellvglny icryeqqqna lldcassfdf edcmewqmky gnlyid
//
LOCUS       XP_016724409             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g14450, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016724409
VERSION     XP_016724409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="uncharacterized protein At4g14450,
                     chloroplastic"
                     /calculated_mol_wt=11715
     CDS             1..105
                     /gene="LOC107936229"
                     /coded_by="XM_016868920.2:70..387"
                     /db_xref="GeneID:107936229"
ORIGIN      
        1 mstaprkssa vdgsdrrqps rlqrcapasi rispvsnwnv aipllspvpp sppsidlgmt
       61 ekreelprke qqrqkqtter qkrvfamwqh paapfcyepa pfvpv
//
LOCUS       XP_016724416             763 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724416
VERSION     XP_016724416.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724416.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..763
                     /product="uncharacterized protein"
                     /calculated_mol_wt=88766
     Region          184..230
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          303..344
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          353..403
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          451..504
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     Region          620..667
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..763
                     /gene="LOC107936236"
                     /coded_by="XM_016868927.2:78..2369"
                     /db_xref="GeneID:107936236"
ORIGIN      
        1 mdmemgsqhf ghqhpvvfkd vlndqtkeai clrcgemvfg ssfscmecef ylhkkcaeap
       61 skidhpfhrn hplvllpeps ykgclchfcg ktceksvyhc sckldfhvkc alfplnmaek
      121 kleelkhvti kvpllftedd nkeletldcf mcwepllesm yfsldcgfnl hkkcvelphe
      181 ikypfhkrhp lilqfnvdhf sckiclqkps gkgfvyscsp crfavhikca efppilnlpc
      241 hrnhplflhv kregrschac renpsfmtce etqqnkfyrc ssctfglhle calppltike
      301 qihkhpfslf wrqvsficda cglegkfvsy icstcnllvh kkcislppii riprhkhpif
      361 hkyflqghqf kdcdcrlcdc rveieygsys cfnckfvvhv kcalekkgwy kevdpkdidr
      421 klaivpkmst npidcviekh ddgemtkikh fshkhnlils knlieehcdg aslmdkycdg
      481 cvlpisnpfy ycsecdfllh kscakspkqe qlwfhicqrf lillvgcifr cdlcqsesng
      541 fsymckkcdv hyclycatrn yrikhqahkh rlffdrnhkg rcsacnvsvr glfkckscda
      601 fnlhvdclrl pltawhkcde hrlaltyeev nkyseyqfcd icekkrdsrk wfyycatcdi
      661 sahsycalgr ypfikpgsiy nelkdhphpl tfvrkifsgp rchkcfqpcr dlvlecadss
      721 cdyvvhwdcv kpvylrsekt arpktetgei vedtsegssc iil
//
LOCUS       XP_016724399             370 aa            linear   PLN 06-AUG-2024
DEFINITION  1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Gossypium
            hirsutum].
ACCESSION   XP_016724399
VERSION     XP_016724399.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868910.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724399.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="1-aminocyclopropane-1-carboxylate oxidase
                     homolog 1"
                     /calculated_mol_wt=41864
     Region          32..363
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..370
                     /gene="LOC107936217"
                     /coded_by="XM_016868910.2:132..1244"
                     /db_xref="GeneID:107936217"
ORIGIN      
        1 mvvtsgagvh ddsnnydrek elkafdnska gvkglvdagi tkvprmfirs dissntlett
       61 kktqykipvi dlqgieddpr rhkeisdqvr hasetwgffq ivnhgitvsv leemkdgvrr
      121 ffeqdtevkk kyyaresgsr fryqsnfdly tapfanwrdt cfcmmapdpp qpqelpevlr
      181 dilvkytkev mrlgsclfrv lsealglrsn hleemgcaeg lavlshyypp cpepeltfgt
      241 skhsdtdflt vllqdqiggl qvlyedqwld vppvpgalvi nvgdllqlit ndkfksvehr
      301 vlanregprv svasffttgl lpssrvygpi kellsqhnpp lyrqttvkdy vsyiyqhgld
      361 gtsplhlfrl
//
LOCUS       XP_016724407             152 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 5B3 [Gossypium hirsutum].
ACCESSION   XP_016724407
VERSION     XP_016724407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="CASP-like protein 5B3"
                     /calculated_mol_wt=15970
     Region          6..137
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..152
                     /gene="LOC107936226"
                     /coded_by="XM_016868918.2:361..819"
                     /db_xref="GeneID:107936226"
ORIGIN      
        1 mraipgspgt ltslflrimq cvfaagsias msttsnffnf tafcyliasm glqvvwsfal
       61 aildgialvk kkvlhnpvlv slyvvgdwvt allslaaass sggiavlyfn dlgscglgee
      121 cqkyqlaval aflgwvavsi sflimlwlfa ag
//
LOCUS       XP_016724405             370 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At4g08300 [Gossypium hirsutum].
ACCESSION   XP_016724405
VERSION     XP_016724405.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724405.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="WAT1-related protein At4g08300"
                     /calculated_mol_wt=41289
     Region          43..352
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..370
                     /gene="LOC107936225"
                     /coded_by="XM_016868916.2:184..1296"
                     /db_xref="GeneID:107936225"
ORIGIN      
        1 madksgssys dmyrrfkphi lmvlsqfgyt flyifteacf nhgmnphvhi tyrhvvagiv
       61 mfpfayfler kkrpkltfal fleifvlsil gvsltlnmyf vslrytsptf laalvntias
      121 ltfiiavvfr levvnlrnpr giakvigtfv slvgvttmtl ykgpavkilg pplvqiqgks
      181 pihenwlkgs ilivascltw silyimqaft lkrypaplsl ttwmsfvgaa qsavftvivn
      241 hkpaswkmgf nidfwatlya gvvcsgliif iqlwctevkg pvfvtmfnpl stllvallgy
      301 fvlgerlymg silggaivii glylvlwgkd rdqeaqigta elpylaydhk ndtkahkils
      361 vereappsep
//
LOCUS       XP_016724408             317 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL16 [Gossypium hirsutum].
ACCESSION   XP_016724408
VERSION     XP_016724408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868919.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..317
                     /product="RING-H2 finger protein ATL16"
                     /calculated_mol_wt=35469
     Region          120..163
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            148..153
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..317
                     /gene="LOC107936227"
                     /coded_by="XM_016868919.2:315..1268"
                     /db_xref="GeneID:107936227"
ORIGIN      
        1 mdlvrkssqa lspnitsgpp phlhssepsf piiaiavigi latgfllvsy yifvikccln
       61 whridllrrf slsrrrpedp itpyspameh rgldeslirs ipifqfkknn gnidektlce
      121 cavclnefqe deklrmipnc nhvfhidcid vwlqnnancp lcrtrissst inapslapqd
      181 piinggdegy vvielgdnnn hsssdesisg spmelkdvek rgrklhkgts mgdewidsrn
      241 kgaefgiqpi rrsismdssa drqlylavqe airqkrevne gispiegcss rvmrrsffsf
      301 shgrgsknai lpvylet
//
LOCUS       XP_040944089             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944089
VERSION     XP_040944089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088155.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..142
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16639
     CDS             1..142
                     /gene="LOC107944774"
                     /coded_by="XM_041088155.1:579..1007"
                     /db_xref="GeneID:107944774"
ORIGIN      
        1 mwwpwssrtq vtcekrnsqn qtgspkfcsf ygfqlttkhy ifeealecel gslhrtggfe
       61 gsqhkrhnkl khmlvarpes vlflvqqtih lvlnlmkhhc qkphqqdyfn nssliqikad
      121 fllnlvcmpl cvvsrvqfyk mr
//
LOCUS       XP_016724404             118 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724404
VERSION     XP_016724404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..118
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12918
     CDS             1..118
                     /gene="LOC107936224"
                     /coded_by="XM_016868915.2:319..675"
                     /db_xref="GeneID:107936224"
ORIGIN      
        1 maracaasfp srgtnahplp ppavgdpsya qkstlsrkpe plpqkgqqhh qkvsfqkrep
       61 apitsakypa kyhnstrgaq nsptqsytmd ipqlrivfna pnfrseapsy ettakrvf
//
LOCUS       XP_016724418             150 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF096 [Gossypium
            hirsutum].
ACCESSION   XP_016724418
VERSION     XP_016724418.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724418.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="ethylene-responsive transcription factor ERF096"
                     /calculated_mol_wt=16720
     Region          30..88
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(32..33,35,37,39,41,45,47,55,57,60)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..150
                     /gene="LOC107936239"
                     /coded_by="XM_016868929.2:13..465"
                     /db_xref="GeneID:107936239"
ORIGIN      
        1 mqiiqthifi iyvmegsssk gkeeggetir yrgvrrrpwg kfaaeirdsn rhgarvwlgt
       61 fntaeeaara ydraaysmrg hlailnfpqe ypmgsggata yrgsssaass sssssssmdq
      121 rgkqvfeiey lddklleell eneeknkekk
//
LOCUS       XP_016724410             219 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-response factor C3 [Gossypium hirsutum].
ACCESSION   XP_016724410
VERSION     XP_016724410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868921.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..219
                     /product="ethylene-response factor C3"
                     /calculated_mol_wt=24555
     Region          84..147
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(85..86,88,90,92,94,98,100,108,110,113)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..219
                     /gene="LOC107936230"
                     /coded_by="XM_016868921.2:113..772"
                     /db_xref="GeneID:107936230"
ORIGIN      
        1 mesfhfhspn sncssessfg speffpldhn slpfnendse emllygllae akqetsselt
       61 ypnqvkeeev tsidiesptk ekayrgvrrr pwgkfaaeir dstrngvrvw lgtfdsaeaa
      121 alaydqaafa mrgsaailnf pvekvreslr emkcnqedgg spvvalkrkh smrrkmvsrn
      181 kkerenggvr innavvfedl gpdfleqllt tcdqaatpw
//
LOCUS       XP_040944092             269 aa            linear   PLN 06-AUG-2024
DEFINITION  repetitive proline-rich cell wall protein 1-like [Gossypium
            hirsutum].
ACCESSION   XP_040944092
VERSION     XP_040944092.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088158.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="repetitive proline-rich cell wall protein
                     1-like"
                     /calculated_mol_wt=30446
     CDS             1..269
                     /gene="LOC121203085"
                     /coded_by="XM_041088158.1:95..904"
                     /db_xref="GeneID:121203085"
ORIGIN      
        1 mmstthllvl llgmvtltap tfgtcespny gkpptpvykp pkvkpppyep kppvytppkk
       61 ekpepkppvy eppkkekpep kppvyeppkk eklepkspvy appkkekpep kppiyeppkk
      121 ekpepkppvy tppkkekpep kppmyeppkk ppmyepkppk psvytppkkk kpepkppmye
      181 ppkkppmyep kppkppvytp pkkekpepkp pmyqppnnpp iyepkppkpp vyappkeekp
      241 kpkppvyepp ayeppyghyp ghpplgkpq
//
LOCUS       XP_016724429             230 aa            linear   PLN 06-AUG-2024
DEFINITION  repetitive proline-rich cell wall protein 1-like [Gossypium
            hirsutum].
ACCESSION   XP_016724429
VERSION     XP_016724429.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868940.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..230
                     /product="repetitive proline-rich cell wall protein
                     1-like"
                     /calculated_mol_wt=25988
     CDS             1..230
                     /gene="LOC107936248"
                     /coded_by="XM_016868940.2:15..707"
                     /db_xref="GeneID:107936248"
ORIGIN      
        1 mmstthllif llgvaalatp sfgtyespny gkpptpvykp pkvkpppyeh kppvyeppkk
       61 ekpepkppvy tppkkekpep kppvyespkk ekpepkppvy tppkkekleh kppvyeppkk
      121 ekpepkppvy tppkkekpep kppvyeppkk ekpkpkppvy tppkkekpep kppvyqppkk
      181 ppvyepkppk ppvyvppkke kpgpkppvye hpkkppyghy pghpplgkpq
//
LOCUS       XP_016724428             225 aa            linear   PLN 06-AUG-2024
DEFINITION  repetitive proline-rich cell wall protein [Gossypium hirsutum].
ACCESSION   XP_016724428
VERSION     XP_016724428.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868939.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724428.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="repetitive proline-rich cell wall protein"
                     /calculated_mol_wt=25293
     CDS             1..225
                     /gene="LOC107936247"
                     /coded_by="XM_016868939.2:33..710"
                     /db_xref="GeneID:107936247"
ORIGIN      
        1 mstthllill lgvvalatps fgtyespnyg kpptpvykpp kvkpppyehp vykppkvkpp
       61 pyehkppvye ppkkekpepk ppvytppkke kpepkppvye ppkkekpepk ppvytppkke
      121 kpepkppvye ppkkekpepk ppvytppkke kpepkppvyg ppkkekppay kppkkppvye
      181 pkppkppvyt ppkkekpepk ppvhespkkp pyghypghpp lgkpq
//
LOCUS       XP_016724423             651 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724423
VERSION     XP_016724423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..651
                     /product="cryptochrome-1 isoform X1"
                     /calculated_mol_wt=74385
     Region          7..483
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..651
                     /gene="LOC107936243"
                     /coded_by="XM_016868934.2:405..2360"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaavtg
      181 tverctiegl glenelekss nallgrgcsp gwsnadkalt efveqnlfdy sksrfkvgas
      241 stsllspylh fgeisvrkvf rcvrmkqilw rrewksqgee svnlflkaig lreysrylcf
      301 nypfthersl lrnmkyfpwn adanhfkvwr qgrtgyplvd agmrelwatg wihnrirviv
      361 ssfavkflll pwkwgmkyfw dtlldadlec dilgwqyisg slpdgqeleq ldcpqiqgsk
      421 fdsegeyvrq wlpelarmpi ewihhpwdap ltvlkaagve lglnypkpii didkarehlr
      481 kaifkmweme aaaksatsdq mnedvfdnsd siktsailkv ipkekssclt yssndqrvps
      541 fqncnngllp rkrplpvdee klhmdkpnkq nkeagtsgre dlcstaesla skrqkstsst
      601 stsiisftvp qycsssdgrp fqdhessnln ltwhekidle qtsnkngvlr q
//
LOCUS       XP_016724422             651 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724422
VERSION     XP_016724422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868933.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..651
                     /product="cryptochrome-1 isoform X1"
                     /calculated_mol_wt=74385
     Region          7..483
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..651
                     /gene="LOC107936243"
                     /coded_by="XM_016868933.2:394..2349"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaavtg
      181 tverctiegl glenelekss nallgrgcsp gwsnadkalt efveqnlfdy sksrfkvgas
      241 stsllspylh fgeisvrkvf rcvrmkqilw rrewksqgee svnlflkaig lreysrylcf
      301 nypfthersl lrnmkyfpwn adanhfkvwr qgrtgyplvd agmrelwatg wihnrirviv
      361 ssfavkflll pwkwgmkyfw dtlldadlec dilgwqyisg slpdgqeleq ldcpqiqgsk
      421 fdsegeyvrq wlpelarmpi ewihhpwdap ltvlkaagve lglnypkpii didkarehlr
      481 kaifkmweme aaaksatsdq mnedvfdnsd siktsailkv ipkekssclt yssndqrvps
      541 fqncnngllp rkrplpvdee klhmdkpnkq nkeagtsgre dlcstaesla skrqkstsst
      601 stsiisftvp qycsssdgrp fqdhessnln ltwhekidle qtsnkngvlr q
//
LOCUS       XP_016724424             651 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724424
VERSION     XP_016724424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..651
                     /product="cryptochrome-1 isoform X2"
                     /calculated_mol_wt=74420
     Region          7..483
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..651
                     /gene="LOC107936243"
                     /coded_by="XM_016868935.2:406..2361"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaavtg
      181 tverctiegl glenelekss nallgrgcsp gwsnadkalt efveqnlfdy sksrfkvgas
      241 stsllspylh fgeisvrkvf rcvrmkqilw rrewksqgee svnlflkaig lreysrylcf
      301 nypfthersl lrnmkyfpwn adanhfkvwr qgrtgyplvd agmrelwatg wihnrirviv
      361 ssfavkflll pwkwgmkyfw dtlldadlec dilgwqyisg slpdgqeleq ldcpqiqgsk
      421 fdsegeyvrq wlpelarmpi ewihhpwdap ltvlkaagve lglnypkpii didkarehlr
      481 kaifkmweme aaaksatsdq mnedvfdnsd siktsailkv ipkekssclt yssndqrvps
      541 fqncnngllp rkrplpvdee klhmdkpnkq nkeagtsgre dlcstaesla skrqkstsst
      601 stsiisftvp qycsssdgrp fqdhessnln ltwhekidle qtsnknalqe f
//
LOCUS       XP_016724425             649 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016724425
VERSION     XP_016724425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..649
                     /product="cryptochrome-1 isoform X3"
                     /calculated_mol_wt=74185
     Region          7..481
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..649
                     /gene="LOC107936243"
                     /coded_by="XM_016868936.2:406..2355"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaagtv
      181 erctieglgl enelekssna llgrgcspgw snadkaltef veqnlfdysk srfkvgasst
      241 sllspylhfg eisvrkvfrc vrmkqilwrr ewksqgeesv nlflkaiglr eysrylcfny
      301 pfthersllr nmkyfpwnad anhfkvwrqg rtgyplvdag mrelwatgwi hnrirvivss
      361 favkflllpw kwgmkyfwdt lldadlecdi lgwqyisgsl pdgqeleqld cpqiqgskfd
      421 segeyvrqwl pelarmpiew ihhpwdaplt vlkaagvelg lnypkpiidi dkarehlrka
      481 ifkmwemeaa aksatsdqmn edvfdnsdsi ktsailkvip keksscltys sndqrvpsfq
      541 ncnngllprk rplpvdeekl hmdkpnkqnk eagtsgredl cstaeslask rqkstsstst
      601 siisftvpqy csssdgrpfq dhessnlnlt whekidleqt snkngvlrq
//
LOCUS       XP_040944093             649 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944093
VERSION     XP_040944093.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088159.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..649
                     /product="cryptochrome-1 isoform X3"
                     /calculated_mol_wt=74185
     Region          7..481
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..649
                     /gene="LOC107936243"
                     /coded_by="XM_041088159.1:394..2343"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaagtv
      181 erctieglgl enelekssna llgrgcspgw snadkaltef veqnlfdysk srfkvgasst
      241 sllspylhfg eisvrkvfrc vrmkqilwrr ewksqgeesv nlflkaiglr eysrylcfny
      301 pfthersllr nmkyfpwnad anhfkvwrqg rtgyplvdag mrelwatgwi hnrirvivss
      361 favkflllpw kwgmkyfwdt lldadlecdi lgwqyisgsl pdgqeleqld cpqiqgskfd
      421 segeyvrqwl pelarmpiew ihhpwdaplt vlkaagvelg lnypkpiidi dkarehlrka
      481 ifkmwemeaa aksatsdqmn edvfdnsdsi ktsailkvip keksscltys sndqrvpsfq
      541 ncnngllprk rplpvdeekl hmdkpnkqnk eagtsgredl cstaeslask rqkstsstst
      601 siisftvpqy csssdgrpfq dhessnlnlt whekidleqt snkngvlrq
//
LOCUS       XP_040944094             649 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944094
VERSION     XP_040944094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088160.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..649
                     /product="cryptochrome-1 isoform X4"
                     /calculated_mol_wt=74220
     Region          7..481
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..649
                     /gene="LOC107936243"
                     /coded_by="XM_041088160.1:395..2344"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaagtv
      181 erctieglgl enelekssna llgrgcspgw snadkaltef veqnlfdysk srfkvgasst
      241 sllspylhfg eisvrkvfrc vrmkqilwrr ewksqgeesv nlflkaiglr eysrylcfny
      301 pfthersllr nmkyfpwnad anhfkvwrqg rtgyplvdag mrelwatgwi hnrirvivss
      361 favkflllpw kwgmkyfwdt lldadlecdi lgwqyisgsl pdgqeleqld cpqiqgskfd
      421 segeyvrqwl pelarmpiew ihhpwdaplt vlkaagvelg lnypkpiidi dkarehlrka
      481 ifkmwemeaa aksatsdqmn edvfdnsdsi ktsailkvip keksscltys sndqrvpsfq
      541 ncnngllprk rplpvdeekl hmdkpnkqnk eagtsgredl cstaeslask rqkstsstst
      601 siisftvpqy csssdgrpfq dhessnlnlt whekidleqt snknalqef
//
LOCUS       XP_040944095             645 aa            linear   PLN 06-AUG-2024
DEFINITION  cryptochrome-1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040944095
VERSION     XP_040944095.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088161.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..645
                     /product="cryptochrome-1 isoform X5"
                     /calculated_mol_wt=73688
     Region          7..481
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
     CDS             1..645
                     /gene="LOC107936243"
                     /coded_by="XM_041088161.1:407..2344"
                     /db_xref="GeneID:107936243"
ORIGIN      
        1 mssgktivwf rrdlriednp alaaaardgs vfpvyiwcpe eegqfypgrv srwwlkqsls
       61 hleqslkslg aelvmiktqs tlsalldcik ateatkvvvn rlydpvslvr dhsieeklae
      121 vgisvqsyng dllyepweiy ddegrafstf daywdkclnm qmepvsllpp wrlmpaagtv
      181 erctieglgl enelekssna llgrgcspgw snadkaltef veqnlfdysk srfkvgasst
      241 sllspylhfg eisvrkvfrc vrmkqilwrr ewksqgeesv nlflkaiglr eysrylcfny
      301 pfthersllr nmkyfpwnad anhfkvwrqg rtgyplvdag mrelwatgwi hnrirvivss
      361 favkflllpw kwgmkyfwdt lldadlecdi lgwqyisgsl pdgqeleqld cpqiqgskfd
      421 segeyvrqwl pelarmpiew ihhpwdaplt vlkaagvelg lnypkpiidi dkarehlrka
      481 ifkmwemeaa aksatsdqmn edvfdnsdsi ktsailkvip keksscltys sndqrvpsfq
      541 ncnngllprk rplpvdeekl hmdkpnkqnk eagtsgredl cstaeslask rqkstsstst
      601 siisftvpqy csssdgrpfq dhessnlnlt whekidleqt snkng
//
LOCUS       XP_016724427             326 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase PP1 isozyme 2 [Gossypium
            hirsutum].
ACCESSION   XP_016724427
VERSION     XP_016724427.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868938.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724427.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="serine/threonine-protein phosphatase PP1 isozyme
                     2"
                     /calculated_mol_wt=36866
     Region          5..294
                     /region_name="MPP_PP1_PPKL"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; cd07414"
                     /db_xref="CDD:277359"
     Site            order(60,62,88,92,120..121,125..126,130,169,191..193,202,
                     216..218,244,268..272)
                     /site_type="active"
                     /db_xref="CDD:277359"
     Site            order(60,62,88,120,169,244)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277359"
     Site            order(92,125..126,130,191..193,202,216..218,268..272)
                     /site_type="other"
                     /note="natural toxin binding site [chemical binding]"
                     /db_xref="CDD:277359"
     Site            order(175,177,194,199,212,221,229..230,232..234,236..238,
                     253,257,284..285,287,289,291)
                     /site_type="other"
                     /note="MYPT1 binding site [polypeptide binding]"
                     /db_xref="CDD:277359"
     CDS             1..326
                     /gene="LOC107936246"
                     /coded_by="XM_016868938.2:460..1440"
                     /db_xref="GeneID:107936246"
ORIGIN      
        1 metrvldgii nrllevrgkp gkqiqlsepe irqlclvskd iflmqpille leapikicgd
       61 ihgqysdllr lfenggfppr anylflgdyv drgkqsleti clllaykiky penffllrgn
      121 hecasvnriy gfydeckrrf nvrlwkaftd sfnclpvaal ieekifcmhg glspelrnld
      181 qirnlkrptd vpesgllcdl lwsdpskdiq gwgpndrgvs yifgadrvld clkkldldli
      241 crahqvvedg yeffanrqlv tifsapnycg efdnaaamms vdetlicsfq ilkpaakkpk
      301 fgfgtftstk sptppsriks flgamv
//
LOCUS       XP_016724419             332 aa            linear   PLN 06-AUG-2024
DEFINITION  malate dehydrogenase [Gossypium hirsutum].
ACCESSION   XP_016724419
VERSION     XP_016724419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868930.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="malate dehydrogenase"
                     /calculated_mol_wt=35380
     Region          24..332
                     /region_name="PLN00135"
                     /note="malate dehydrogenase"
                     /db_xref="CDD:177744"
     CDS             1..332
                     /gene="LOC107936241"
                     /coded_by="XM_016868930.2:208..1206"
                     /db_xref="GeneID:107936241"
ORIGIN      
        1 makepvrvlv tgaagqigya lvpmiargvm lgadqpvilh mldippaaea lngvkmelvd
       61 aafpllkgvv attdaveact gvnvavmvgg fprkegmerk dvmsknvsiy ksqasaleqh
      121 aapnckvlvv anpantnali lkefapsipa knitcltrld hnralgqise klnvqvsdvk
      181 nviiwgnhss tqypdvnhat vmtpsgekpv relvkddawl ngefittvqq rgaaiikark
      241 lssalsaasa acdhirdwvl gtpegtwvsm gvysdgsyna pagviysfpv tckngewtiv
      301 qglaidefsr kkldltgvel teekelaysc ls
//
LOCUS       XP_016724420             159 aa            linear   PLN 06-AUG-2024
DEFINITION  chromatin modification-related protein EAF6 [Gossypium hirsutum].
ACCESSION   XP_016724420
VERSION     XP_016724420.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868931.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724420.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="chromatin modification-related protein EAF6"
                     /calculated_mol_wt=17333
     Region          15..91
                     /region_name="NuA4"
                     /note="Histone acetyltransferase subunit NuA4; pfam09340"
                     /db_xref="CDD:462763"
     CDS             1..159
                     /gene="LOC107936242"
                     /coded_by="XM_016868931.2:107..586"
                     /db_xref="GeneID:107936242"
ORIGIN      
        1 mslghkssgn paailsslmn kreklqdelr niekqvfele tnylqdsshf ghvlkgfegf
       61 lssskntanl krsrkfqped rlfslssvts pvadelgvrq ddgrsdfgsa rskggglaan
      121 gqgkpkkgrt assardgkrt rpsseqdfdd eddpdmslr
//
LOCUS       XP_016724441             543 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-splicing factor SLU7 [Gossypium hirsutum].
ACCESSION   XP_016724441
VERSION     XP_016724441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868952.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..543
                     /product="pre-mRNA-splicing factor SLU7"
                     /calculated_mol_wt=62937
     Region          136..412
                     /region_name="Slu7"
                     /note="Pre-mRNA splicing Prp18-interacting factor;
                     pfam11708"
                     /db_xref="CDD:463326"
     CDS             1..543
                     /gene="LOC107936255"
                     /coded_by="XM_016868952.2:215..1846"
                     /db_xref="GeneID:107936255"
ORIGIN      
        1 matasvafks redhrkqlel eearkaglap aevdedgkei nphipqymss apwylnaerp
       61 slkhqrkwks dpnytkswyd rgakifqaek yrkgacencg amthdakscm erprkkgakw
      121 tnmhiapdek ietfeldydg krdrwngyda styarviery eardearrky lkeqqlkkle
      181 eknsknegev egegeegeis deeddddalk vdeakvdesk qmdfakvekr vrttgggstg
      241 tvrnlrired takyllnldv nsayydpktr smredplpda dpnekfyegd nqyrmsgqal
      301 efkqlnihaw eafdkgqdih mqaapsqael lyknykvike klksktkdti mekygnaate
      361 eeipvelllg qserqveydr agriikgmet slpkskyeed vfinnhtsvw gswwkdhqwg
      421 ykcckqtirn syctgaagie aaeaatdlmk sniarkasse dapapaqerk hvtwgtdvpe
      481 dlvldekllt ealkkeeerr reekderkrk ynvrwndevt aeemeayrmk rvhhddpmkd
      541 fln
//
LOCUS       XP_016724411             217 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Gossypium hirsutum].
ACCESSION   XP_016724411
VERSION     XP_016724411.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724411.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4"
                     /calculated_mol_wt=23663
     Region          67..180
                     /region_name="ALOG_dom"
                     /note="ALOG domain; pfam04852"
                     /db_xref="CDD:398493"
     CDS             1..217
                     /gene="LOC107936231"
                     /coded_by="XM_016868922.2:404..1057"
                     /db_xref="GeneID:107936231"
ORIGIN      
        1 mdslqgfqts ninpssttnl npnfpanlsi ttvgttagat tntiplsaaa asssssssst
       61 spstlsryen qkrrdwntfg qylrnhrppl slsrcsgahv leflryldqf gktkvhtqlc
      121 pffghpnppa pcpcplrqaw gsldaligrl raafeehggk peanpfgara vrlylrevrd
      181 sqakargisy ekkkrkrpph pqpqvpplpp phgnqnq
//
LOCUS       XP_016724439             616 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT3 [Gossypium hirsutum].
ACCESSION   XP_016724439
VERSION     XP_016724439.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868950.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724439.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="probable methyltransferase PMT3"
                     /calculated_mol_wt=69538
     Region          92..603
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..616
                     /gene="LOC107936254"
                     /coded_by="XM_016868950.2:492..2342"
                     /db_xref="GeneID:107936254"
ORIGIN      
        1 mrgrsdggqk krlitslcav aiflgflyvy ygsifgsssn gasaleyggk slrkigssyl
       61 ggddesstks gledgdvvvp ktfpvcddrh selipcldrn iiyqmrlkld lsvmehyerh
      121 cppperrync lippppgykv pikwpqsrde vwkaniphth laheksdqnw mvvkgekivf
      181 pgggthfhyg adkyiasian mlnfshnnln negrvrtvld vgcgvasfga yllssdiiam
      241 slapndvhqn qiqfalergi paclgvlgtk rlpypsrsfe lahcsrcrid wlqrdgilll
      301 eldrllrpgg yfaysspeay aqdeedlriw kemsalverm cwriaakrnq tviwqkpltn
      361 dcymerapgt npplcrsddd pdavwgvpme acitpysdhd qkakgsglap wparltsppp
      421 rladfgysne mfeidtetwr qrvenywnll spkieantlr nlmdmkanmg sfaaalkern
      481 vwvmnviped gpntlkliyd rgligtthnw ceafstyprt ydllhawtvf sdiekkgcsa
      541 edlllemdri lrpkgfiiir dkqpvidfvr kylsalhwea vatadsssds ehegdnvvfi
      601 vqkklwltse silnse
//
LOCUS       XP_016724445             548 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase tricornered [Gossypium hirsutum].
ACCESSION   XP_016724445
VERSION     XP_016724445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868956.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..548
                     /product="serine/threonine-protein kinase tricornered"
                     /calculated_mol_wt=63393
     Region          53..114
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cd21742"
                     /db_xref="CDD:439267"
     Site            order(53..54,56..58,60..61,64..65,68,71,75,100,103..105,
                     107..108,111..112)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439267"
     Region          117..482
                     /region_name="STKc_NDR_like"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; cd05599"
                     /db_xref="CDD:270750"
     Site            order(125..129,133,146,148,180,196..197,199,203,205,242,
                     244,246..247,249,259..260,263,318..323,350,356,359)
                     /site_type="active"
                     /db_xref="CDD:270750"
     Site            order(125..129,133,146,148,180,197..199,203,242,244,
                     246..247,249,259..260)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270750"
     Site            order(129,203,205,242,244,246,263,318..323,350,356,359)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270750"
     Site            order(259..271,314..323)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270750"
     Site            476..481
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270750"
     CDS             1..548
                     /gene="LOC107936259"
                     /coded_by="XM_016868956.2:320..1966"
                     /db_xref="GeneID:107936259"
ORIGIN      
        1 mettrrwfnk fkskdkvrss knkeavgnak egskpptsee apsdvtkqrv aaakqyiedh
       61 ykkqmkslqe rkerrdilek kladaevsee eqnnllkyfe kkereymrmq rhkmgtddfe
      121 pltmigkgaf gevricreka tghvyamkkl kksemlrrgq vehvkaernl laevdsnciv
      181 klycsfqdee ylylimeylp ggdmmtllmr kdiltedear fyvgetvlai esihkhnyih
      241 rdikpdnlll drnghmklsd fglckpldcs nlqekdfsma knlsgalqsd grpaapkrtq
      301 qeqlqhwqrn rrmlaystvg tpdyiapevl lkkgygmecd wwslgaimye mlvgyppfys
      361 depmstcrki vnwrthlkfp eeaklspeak dliskllcnv eqrlgtkgah eikihpwfkg
      421 iewdklyqmk aafipevnde ldtqnfekfe eadnqipsat ksgpwrkmlp skdinfvgyt
      481 yknyeivndn qlpgiaelkk ksskpkrpsi kslfedesaa aasqpvqgsf inllppqiee
      541 apedrsrk
//
LOCUS       XP_040944098             461 aa            linear   PLN 06-AUG-2024
DEFINITION  casein kinase 1-like protein 10 [Gossypium hirsutum].
ACCESSION   XP_040944098
VERSION     XP_040944098.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088164.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..461
                     /product="casein kinase 1-like protein 10"
                     /calculated_mol_wt=52214
     Region          8..282
                     /region_name="STKc_CK1_delta_epsilon"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; cd14125"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,88,90,128,130,132..133,135,
                     149,152,175..178)
                     /site_type="active"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,130,132..133,135,149)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271027"
     Site            order(19,88,90,128,130,132,152,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271027"
     Site            order(148..158,160..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271027"
     CDS             1..461
                     /gene="LOC107936256"
                     /coded_by="XM_041088164.1:634..2019"
                     /db_xref="GeneID:107936256"
ORIGIN      
        1 mehiiggkfk lgrkigngsf gqlylgvnvq sgeevavkle pvktkhpqlh yesklymllq
       61 ggtgiphlkw fgvegeysim vidllgpsle dlfnycnrkf slktvlmlad qlinraeymh
      121 srgflhrdik pdnflmglgr kanqvyvidy glakkyrdlq thkhipyren knltgtarya
      181 svnthlgveq srrddleslg yvlmyflrgs lpwqglkagn kkqkydkise kkmltpievl
      241 cksypsefts yfhycrslrf edkpdysylk rlfrdlfire gyqfdyvfdw tmlrypqaas
      301 ssrvrpspkp glnpqgvsae rtgrpsvgqe irerfsgave afarrngsgh gdqsrhrspd
      361 nvlsskdmqp gsdraqsssr ngstskrpvv sgsrpnssge psdnrssrlv sssgrllttq
      421 rvqpgfesks stftrttatr ssrnhalrsf efltigsgkr k
//
LOCUS       XP_016724432            1278 aa            linear   PLN 06-AUG-2024
DEFINITION  COP1-interacting protein 7 [Gossypium hirsutum].
ACCESSION   XP_016724432
VERSION     XP_016724432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1278
                     /product="COP1-interacting protein 7"
                     /calculated_mol_wt=141305
     Region          <761..1028
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..1278
                     /gene="LOC107936250"
                     /coded_by="XM_016868943.2:378..4214"
                     /db_xref="GeneID:107936250"
ORIGIN      
        1 mksstqldsa vfqltptrtr felvisengk sekmasglln pflahlkiaq dqiskggysi
       61 ilqpepgida twftkgtmer fvrfvstpei lervytvele ilqieeaiai qsnnniglsa
      121 aaeehhlkss esiegkratl dsneekaiil yapgarppla ngsavqeenp kvqllkvlet
      181 rktalqkeqg mafaraaaag fsiddmaplm sfserfgasr lrdacvefte lwkrkhetgq
      241 wleieamsrr adfsamkelk qawpvisenn gksglqsstd ekppmdqqtp grqeysqaqf
      301 prplfppwpi hnsppggmpt fqgyamqgms yyphypgssp ffqqpypsme dlshnvgqri
      361 qrrhsmdsqn gseawklera kpqddvesen etsvspksrk krsssgkrqs gmvvirniny
      421 iaskkqnssd sdshsgpemd eedgnsvqkn slrsskgkrs qakpvdteet vsgketdggh
      481 wqafqnyllk gaeeeerran qrifsaekev qekripnrvs edpvvfggqe mgqyeernmt
      541 dmhktsassg rmlkassndq sltsikgghs addrnsvdgs hyteiegrrv yrsstndefi
      601 vnrqqntnsp sgrlavnwfe rssnnindds yivpfrstsv pqvgtddrna ismdsefsls
      661 lqksgtasnr vgsqvnyktd dltlipergm eigsigydpa ldykiqvdae yatsldkkkk
      721 egmkrsktse irksklvadp sdkkktvgpi rkgkpskmsp ldeakaraer lrtykadlqk
      781 mkkekeeaei krlealkmer qkriaarnss naaqpstamq nkkqlllkis pgshkglkft
      841 daepglsspl qrsiritpvv spaslktpkp sklnngtnss gnrlsksvps lpvqkkdigs
      901 vtpdakvsma mirrlsepkv sssarvslvk sqnsepsprr kafrgpesrk isaivnhdks
      961 klvslpelki kttkapnith snsggkgmtq kvnrsvsstt svtelcknld kvsfnidgdd
     1021 smiiektivm leqekpsvpp vnssegtaai qkgndvgrkt kevsdypstr apvsslnags
     1081 ldhehltqqr sqayevqkvn vnntekepsk ftsssvtkkp yhaplarvss sedpcsevsd
     1141 haiapptrlq aaskesesvr arvadsknlk lekipevpdk hqvkespkgi rrllkfgrkn
     1201 hssatgehri esdsvgvnds padefvtkra stsevhtlkn lisqnenpta shtlkksars
     1261 fsllspfksk tsekklta
//
LOCUS       XP_016724433             134 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L14-1 [Gossypium hirsutum].
ACCESSION   XP_016724433
VERSION     XP_016724433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868944.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..134
                     /product="60S ribosomal protein L14-1"
                     /calculated_mol_wt=15299
     Region          3..126
                     /region_name="PTZ00065"
                     /note="60S ribosomal protein L14; Provisional"
                     /db_xref="CDD:240252"
     CDS             1..134
                     /gene="LOC107936251"
                     /coded_by="XM_016868944.2:162..566"
                     /db_xref="GeneID:107936251"
ORIGIN      
        1 mpfkryveig rvalvnygkd ygklvvivdv vdqnralvda pdmvrgqmnf krltltditi
       61 diprvpkkkt lieamekadv knkwensswg rklivqkrra altdfdrfkl mlakikkagv
      121 vrqelaklkk enas
//
LOCUS       XP_040944099             874 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-10A [Gossypium hirsutum].
ACCESSION   XP_040944099
VERSION     XP_040944099.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088165.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..874
                     /product="kinesin-like protein KIN-10A"
                     /calculated_mol_wt=97070
     Region          45..374
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(53..54,128..135,242..243,272..277)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     Region          400..>511
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..874
                     /gene="LOC107936252"
                     /coded_by="XM_041088165.1:186..2810"
                     /db_xref="GeneID:107936252"
ORIGIN      
        1 maptpssssk lnqtqmrtpq fkhrlnftst rnnpaieqhp pgehpvevig rirnypgeqk
       61 dknpisylhi npdnktvrvr adigyrdftl dgisssseed ldtfykkfvq sringvkmga
      121 kctimmygpt gagkshtmfg clkqpgivyr slkdilgdvg eddsggtfvq vtvleiynee
      181 iydllssngg ggfgigwpkg ngskvklevm gkkaknatfl sgseagkisk eiqkvekrri
      241 vkstlcndrs srshcmiild vptvggrlml vdmagsenid qagqvgfeak mqtakinqgn
      301 ialkrvvesi angdshvpfr dskltmllqd sfeddqskil milcaspdpk emhktictle
      361 ygakakcivr gphtplkdkn ddsasavnlg srlaamdqfi nklqmenkqr ererneahka
      421 lvkkeeevaa lrsllevkgs gygvtedein skvnertqml klelekklde crrmaeefve
      481 merrrmeeri lqqqeeveml rkrlqeiefe lcssrdgnge enestneldg ssfakrlvgi
      541 ygdeapgmvm smeldmtdpe pfvhdvkqmd kavnqadpws akhdgfapqf gaklglttvy
      601 eeeeteeene vekviieekr vcsnekdfks tpeqsdsetd ssrllriqni ftlcgnqrel
      661 sqqirtptpa kaaitetidp hwssvmvasd ndsvvkslnk ensgalmaas lkenqnpstd
      721 ctdgqidvyv kweaskenpg kfittlkvik datladlrkl idiylgadnq aftflvlgdp
      781 tgapvpkene aivkasklpi cnnghlaclr pakglqitnh lplsplqltp lpltplenkl
      841 plttstrlsn qgddlspkls phlsstpfit arrw
//
LOCUS       XP_040944100             201 aa            linear   PLN 06-AUG-2024
DEFINITION  glycolipid transfer protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944100
VERSION     XP_040944100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088166.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..201
                     /product="glycolipid transfer protein 1"
                     /calculated_mol_wt=22398
     Region          24..161
                     /region_name="GLTP"
                     /note="Glycolipid transfer protein (GLTP); pfam08718"
                     /db_xref="CDD:462575"
     CDS             1..201
                     /gene="LOC121214467"
                     /coded_by="XM_041088166.1:234..839"
                     /db_xref="GeneID:121214467"
ORIGIN      
        1 megsvftpsl egmkhikspe gemltkpfld vcklilpvld kfgsamslvk sdvggnisrl
       61 ekkyetdpak ynhlysmvke evdcktatds ssctngllwl tramdflvel frnllahpdw
      121 tmtesctdsy gktlkkfhgw iassaftval klapdrkkfm eviagtgdvn admekfcstf
      181 ppfleenhky lakfglddmk a
//
LOCUS       XP_040944101             201 aa            linear   PLN 06-AUG-2024
DEFINITION  glycolipid transfer protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944101
VERSION     XP_040944101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088167.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..201
                     /product="glycolipid transfer protein 1"
                     /calculated_mol_wt=22398
     Region          24..161
                     /region_name="GLTP"
                     /note="Glycolipid transfer protein (GLTP); pfam08718"
                     /db_xref="CDD:462575"
     CDS             1..201
                     /gene="LOC121214467"
                     /coded_by="XM_041088167.1:278..883"
                     /db_xref="GeneID:121214467"
ORIGIN      
        1 megsvftpsl egmkhikspe gemltkpfld vcklilpvld kfgsamslvk sdvggnisrl
       61 ekkyetdpak ynhlysmvke evdcktatds ssctngllwl tramdflvel frnllahpdw
      121 tmtesctdsy gktlkkfhgw iassaftval klapdrkkfm eviagtgdvn admekfcstf
      181 ppfleenhky lakfglddmk a
//
LOCUS       XP_040944102             912 aa            linear   PLN 06-AUG-2024
DEFINITION  KIN14B-interacting protein At4g14310 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944102
VERSION     XP_040944102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088168.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..912
                     /product="KIN14B-interacting protein At4g14310 isoform X1"
                     /calculated_mol_wt=99684
     CDS             1..912
                     /gene="LOC121214469"
                     /coded_by="XM_041088168.1:69..2807"
                     /db_xref="GeneID:121214469"
ORIGIN      
        1 mssssarrqr dliagkqrpa knlnpisdst ptlkktssgk enprpsglsr asvvtqkpki
       61 rpvprvekaa avggsdsegq vrwstssapr grsqspsefv rvfsdlkkdr vsidrekkgf
      121 rgstgrgnke nggfreslvm kvkenegkvk gvrvsdgnck kdakfgsdlg kpngdniqne
      181 gfgafnekgi sdfdselgac irvdekcdak flkekslsdg kslviskekd lsvqesegsg
      241 avikypsklh erlaflegkv kriasdikrt kemldmnnpd askvilsdiq dkisgiekam
      301 gnvvsdsnck sssskgsgde evstkeadgs qskrvvgnvk isvkdlnsee learlfphhk
      361 llrnrtslke psgssqshep sdaiesgcei rdekkllssi ednpialefl asldkrsqvt
      421 trnelatmen sdtqdmdggg gsgaqgpskn lfvkhgvefn lesdeiledf ddqenrptav
      481 ideesedpsi yplneigpkm stggwfvseg eaallahddg scsfyditnc eekaiykppv
      541 gispniwrdc wiirapsadg csgryvvaas agnslesgfc swdfyskevr afhtehrema
      601 srmvlgplpn nalyrrnalc nslspetqqw wykplgplmv atastqkvvk vydirdgeei
      661 mkwevqkpvl tmdyssplqw rnrgkvvvae aemisvwdvn slhpqtvlsv sssgrkisal
      721 hvnntdaeig ggvrqrvsss eaegndgvfc tadsinildf rhpsgigaki akvgvnvhsv
      781 fsrgdmvflg ctnvkpsgkk qpcsqvqqfs lrkqslftty slpesnahsh ysaitqvwgn
      841 snlvmgvcgl glfvfdalkd dglqafiydq gsaqnvreiv gpddmyspsf dylasrvlli
      901 srdrpalwrh ls
//
LOCUS       XP_040944103             887 aa            linear   PLN 06-AUG-2024
DEFINITION  KIN14B-interacting protein At4g14310 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944103
VERSION     XP_040944103.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088169.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..887
                     /product="KIN14B-interacting protein At4g14310 isoform X2"
                     /calculated_mol_wt=96961
     Region          546..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          601..639
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          650..684
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..887
                     /gene="LOC121214469"
                     /coded_by="XM_041088169.1:69..2732"
                     /db_xref="GeneID:121214469"
ORIGIN      
        1 mssssarrqr dliagkqrpa knlnpisdst ptlkktssgk enprpsglsr asvvtqkpki
       61 rpvprvekaa avggsdsegq vrwstssapr grsqspsefv rvfsdlkkdr vsidrekkgf
      121 rgstgrgnke nggfreslvm kvkenegkvk gvrvsdgnck kdakfgsdlg kpngdniqne
      181 gfgafnekgi sdfdselgac irvdekcdak flkekslsdg kslviskekd lsvqesegsg
      241 avikypsklh erlaflegkv kriasdikrt kemldmnnpd askvilsdiq dkisgiekam
      301 gnvvsdsnck sssskgsgde evstkeadgs qskrvvgnvk isvkdlnsee learlfphhk
      361 llrnrtslke psgssqshep sdaiesgcei rdekkllssi ednpialefl asldkrsqvt
      421 trnelatmen sdtqdmdggg gsgaqgpskn lfvkhgvefn lesdeiledf ddqenrptav
      481 ideesedpsi yplneigpkm stggwfvseg eaallahddg scsfyditnc eekaiykppv
      541 gispniwrdc wiirapsadg csgryvvaas agnslesgfc swdfyskevr afhtehrema
      601 srmqwwykpl gplmvatast qkvvkvydir dgeeimkwev qkpvltmdys splqwrnrgk
      661 vvvaeaemis vwdvnslhpq tvlsvsssgr kisalhvnnt daeigggvrq rvssseaegn
      721 dgvfctadsi nildfrhpsg igakiakvgv nvhsvfsrgd mvflgctnvk psgkkqpcsq
      781 vqqfslrkqs lfttyslpes nahshysait qvwgnsnlvm gvcglglfvf dalkddglqa
      841 fiydqgsaqn vreivgpddm yspsfdylas rvllisrdrp alwrhls
//
LOCUS       XP_040944104             886 aa            linear   PLN 06-AUG-2024
DEFINITION  KIN14B-interacting protein At4g14310 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944104
VERSION     XP_040944104.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088170.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..886
                     /product="KIN14B-interacting protein At4g14310 isoform X3"
                     /calculated_mol_wt=96833
     Region          546..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          601..638
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          649..683
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..886
                     /gene="LOC121214469"
                     /coded_by="XM_041088170.1:69..2729"
                     /db_xref="GeneID:121214469"
ORIGIN      
        1 mssssarrqr dliagkqrpa knlnpisdst ptlkktssgk enprpsglsr asvvtqkpki
       61 rpvprvekaa avggsdsegq vrwstssapr grsqspsefv rvfsdlkkdr vsidrekkgf
      121 rgstgrgnke nggfreslvm kvkenegkvk gvrvsdgnck kdakfgsdlg kpngdniqne
      181 gfgafnekgi sdfdselgac irvdekcdak flkekslsdg kslviskekd lsvqesegsg
      241 avikypsklh erlaflegkv kriasdikrt kemldmnnpd askvilsdiq dkisgiekam
      301 gnvvsdsnck sssskgsgde evstkeadgs qskrvvgnvk isvkdlnsee learlfphhk
      361 llrnrtslke psgssqshep sdaiesgcei rdekkllssi ednpialefl asldkrsqvt
      421 trnelatmen sdtqdmdggg gsgaqgpskn lfvkhgvefn lesdeiledf ddqenrptav
      481 ideesedpsi yplneigpkm stggwfvseg eaallahddg scsfyditnc eekaiykppv
      541 gispniwrdc wiirapsadg csgryvvaas agnslesgfc swdfyskevr afhtehrema
      601 srmwwykplg plmvatastq kvvkvydird geeimkwevq kpvltmdyss plqwrnrgkv
      661 vvaeaemisv wdvnslhpqt vlsvsssgrk isalhvnntd aeigggvrqr vssseaegnd
      721 gvfctadsin ildfrhpsgi gakiakvgvn vhsvfsrgdm vflgctnvkp sgkkqpcsqv
      781 qqfslrkqsl fttyslpesn ahshysaitq vwgnsnlvmg vcglglfvfd alkddglqaf
      841 iydqgsaqnv reivgpddmy spsfdylasr vllisrdrpa lwrhls
//
LOCUS       XP_016724443             783 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphate transporter PHO1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724443
VERSION     XP_016724443.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868954.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..783
                     /product="phosphate transporter PHO1 isoform X1"
                     /calculated_mol_wt=90187
     Region          2..339
                     /region_name="SPX"
                     /note="SPX domain; pfam03105"
                     /db_xref="CDD:460807"
     Region          428..761
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..783
                     /gene="LOC107936257"
                     /coded_by="XM_016868954.2:109..2460"
                     /db_xref="GeneID:107936257"
ORIGIN      
        1 mvkfskelea qlipewkdaf vnywqlkkhi kkiklarnkr ptqlnhgfgr sivdpirfia
       61 mkllstklff ssnnntntdd detvkvrsks tedasdheve fyqtellqlf seedevrvff
      121 erldeelnkv nqfyktkese flergealnd qlqtlmdlkq ildgnrrwkp nilprsssss
      181 rrnsgfsdsp lglndgstei sdeiiaafer ngvkfmnspa aaaagggakr kkvekrkaam
      241 ridipattpt saisavtsml wedlisnstk qdstaghsin rkkiqcaekm irtafvelyr
      301 glgllktyss lnmvaftkil kkfdkvskqe asarylkavk rshfissdkv vrlmdevesi
      361 ftqhfanndr kramkflrpr qhkdshlvtf fsglftgcfv slfgiyiila hlcgifsatt
      421 gtaymetvyp vfsvfallsl hmflygcnmm mwkntrinyn fifefapnta lkyrdaflic
      481 ttlmtcivga llihllltaa aispshvdti pgflllifia llicpfdify rptrycflri
      541 mrniicsply kvlmvdffma dqltsqipll rhlestacyf laesfktrqy tckngslyrq
      601 fayvisfspy ywramqcarr wfdesdpnhl anmgkyvsam vaagarltya tqsnslwfgv
      661 vlvtsivatv yqlywdfvkd wgllnpnskn pwlrddlmlk nksfyyisia lnvvlrvawi
      721 esitrfrinq vqthlldffl aslevirrgh wnfyrleneh lnnagkfrav ktvplpfrem
      781 dsd
//
LOCUS       XP_040944105             769 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphate transporter PHO1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944105
VERSION     XP_040944105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088171.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..769
                     /product="phosphate transporter PHO1 isoform X2"
                     /calculated_mol_wt=88539
     Region          2..339
                     /region_name="SPX"
                     /note="SPX domain; pfam03105"
                     /db_xref="CDD:460807"
     Region          414..747
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..769
                     /gene="LOC107936257"
                     /coded_by="XM_041088171.1:109..2418"
                     /db_xref="GeneID:107936257"
ORIGIN      
        1 mvkfskelea qlipewkdaf vnywqlkkhi kkiklarnkr ptqlnhgfgr sivdpirfia
       61 mkllstklff ssnnntntdd detvkvrsks tedasdheve fyqtellqlf seedevrvff
      121 erldeelnkv nqfyktkese flergealnd qlqtlmdlkq ildgnrrwkp nilprsssss
      181 rrnsgfsdsp lglndgstei sdeiiaafer ngvkfmnspa aaaagggakr kkvekrkaam
      241 ridipattpt saisavtsml wedlisnstk qdstaghsin rkkiqcaekm irtafvelyr
      301 glgllktyss lnmvaftkil kkfdkvskqe asarylkavk rshfissdkh fanndrkram
      361 kflrprqhkd shlvtffsgl ftgcfvslfg iyiilahlcg ifsattgtay metvypvfsv
      421 fallslhmfl ygcnmmmwkn trinynfife fapntalkyr daflicttlm tcivgallih
      481 llltaaaisp shvdtipgfl llifiallic pfdifyrptr ycflrimrni icsplykvlm
      541 vdffmadqlt sqipllrhle stacyflaes fktrqytckn gslyrqfayv isfspyywra
      601 mqcarrwfde sdpnhlanmg kyvsamvaag arltyatqsn slwfgvvlvt sivatvyqly
      661 wdfvkdwgll npnsknpwlr ddlmlknksf yyisialnvv lrvawiesit rfrinqvqth
      721 lldfflasle virrghwnfy rlenehlnna gkfravktvp lpfremdsd
//
LOCUS       XP_016724400             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724400
VERSION     XP_016724400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14792
     CDS             1..136
                     /gene="LOC107936218"
                     /coded_by="XM_016868911.2:473..883"
                     /db_xref="GeneID:107936218"
ORIGIN      
        1 mshqqrkilt pgicrkrker eafysfkpsv pvqssvytnp ksppqpncsn rllagymahe
       61 fltrgtllgq kfdpdrseav pmvgslagpr kvktgtepng kkecpsyaev asvlkgdgah
      121 ipgivnptql aswiqm
//
LOCUS       XP_040944106             249 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich cell wall structural protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944106
VERSION     XP_040944106.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088172.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..249
                     /product="glycine-rich cell wall structural protein 1"
                     /calculated_mol_wt=20329
     CDS             1..249
                     /gene="LOC107942203"
                     /coded_by="XM_041088172.1:41..790"
                     /db_xref="GeneID:107942203"
ORIGIN      
        1 mvsvtkgvvl lsllcfnvfv vnviakevvs tkeeeekylt qgggfgtggg ggfgggggfg
       61 gaggggghgg gagggfgkgg gygggigkgg gvgggigkgg gygggigkgg gigkgggvgg
      121 gigkgggygg gigkgggigk gggvgggigk gggygggigk gggigkgggy gggigkgggh
      181 gigggigkgg gvgggigkgg gigkgggfgg gagggygkgg gfgggvggga gggkgggfgg
      241 gggggnghh
//
LOCUS       XP_016731329             732 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR2 [Gossypium hirsutum].
ACCESSION   XP_016731329
VERSION     XP_016731329.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875840.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731329.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..732
                     /product="protein NPGR2"
                     /calculated_mol_wt=81806
     Region          472..703
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          494..524
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          532..559
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          588..>701
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(588,591..592,595..596,598,622,625..626,629..630,
                     632..633,656,659..660,663..664,667)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          588..615
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          620..650
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..732
                     /gene="LOC107942209"
                     /coded_by="XM_016875840.2:306..2504"
                     /db_xref="GeneID:107942209"
ORIGIN      
        1 mavkdwinkr gfhirggfqk mmrciwsgqq lrvddtnass eslatrdysv sgyssragem
       61 vetkadssni eeaesslres gylnyeeara llgrleyqkg niegalhvfe gidvsavtsk
      121 mkvtlsrrce qnrrrsesea apamsmhais llleaiflka kslqhlgrfg eaaqsckiil
      181 etvesalpdg lpdnfstdck lqeilnkave llpelwklag dpqeailsyr rallyywnld
      241 tgtkakleke favlllysga easpltlraq megsfvprnn veeailllli llrkfllkri
      301 gwdpsildhl afalsvsgel ralahqveel qpeimerkeq yrtlalcyyg egeeiialnl
      361 lrnllnsrdn pdcvlellla skicgenmny ieegttwark alvglngrcw qmvskancll
      421 gvllsaqsrm vssdsqrnlq qsktievlet aeklmkesdp yivfhiclen aeqrkldval
      481 hyakqllkle agsnvkgyvl larilsaqkr fvdaetvina alnqtgkwdq gellrtkakl
      541 qiaqgqlkna vetythllai lqvqhkstgn gkkllktkgk wdrglemetw hdlanvyisl
      601 sqwqdaevcl skskaispfs atrwystgil nearglhqea lrsykkaldv npthvpslis
      661 tacilrqlgg qsmpivrsfl mdalrldrtn paawynlgll ykadvsasal eaaecfeaaa
      721 vleesapiep fr
//
LOCUS       XP_016731330             732 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR2 [Gossypium hirsutum].
ACCESSION   XP_016731330
VERSION     XP_016731330.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016875841.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016731330.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..732
                     /product="protein NPGR2"
                     /calculated_mol_wt=81806
     Region          472..703
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          494..524
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          532..559
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          588..>701
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(588,591..592,595..596,598,622,625..626,629..630,
                     632..633,656,659..660,663..664,667)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          588..615
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          620..650
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..732
                     /gene="LOC107942209"
                     /coded_by="XM_016875841.2:383..2581"
                     /db_xref="GeneID:107942209"
ORIGIN      
        1 mavkdwinkr gfhirggfqk mmrciwsgqq lrvddtnass eslatrdysv sgyssragem
       61 vetkadssni eeaesslres gylnyeeara llgrleyqkg niegalhvfe gidvsavtsk
      121 mkvtlsrrce qnrrrsesea apamsmhais llleaiflka kslqhlgrfg eaaqsckiil
      181 etvesalpdg lpdnfstdck lqeilnkave llpelwklag dpqeailsyr rallyywnld
      241 tgtkakleke favlllysga easpltlraq megsfvprnn veeailllli llrkfllkri
      301 gwdpsildhl afalsvsgel ralahqveel qpeimerkeq yrtlalcyyg egeeiialnl
      361 lrnllnsrdn pdcvlellla skicgenmny ieegttwark alvglngrcw qmvskancll
      421 gvllsaqsrm vssdsqrnlq qsktievlet aeklmkesdp yivfhiclen aeqrkldval
      481 hyakqllkle agsnvkgyvl larilsaqkr fvdaetvina alnqtgkwdq gellrtkakl
      541 qiaqgqlkna vetythllai lqvqhkstgn gkkllktkgk wdrglemetw hdlanvyisl
      601 sqwqdaevcl skskaispfs atrwystgil nearglhqea lrsykkaldv npthvpslis
      661 tacilrqlgg qsmpivrsfl mdalrldrtn paawynlgll ykadvsasal eaaecfeaaa
      721 vleesapiep fr
//
LOCUS       XP_016719542             145 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L28, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016719542
VERSION     XP_016719542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864053.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..145
                     /product="50S ribosomal protein L28, chloroplastic"
                     /calculated_mol_wt=15799
     Region          70..135
                     /region_name="RpmB"
                     /note="Ribosomal protein L28 [Translation, ribosomal
                     structure and biogenesis]; COG0227"
                     /db_xref="CDD:439997"
     CDS             1..145
                     /gene="LOC107932105"
                     /coded_by="XM_016864053.2:391..828"
                     /db_xref="GeneID:107932105"
ORIGIN      
        1 matlatvgss svlrfnktep lktnpsspfl gfvtsqlsgi kiscnlpvvv aplksisspf
       61 tpallpvarr icpftgkkan kankvsfsnh ktkklqfvnl qykkvwweag kryvklrlst
      121 kalktiekng ldavakkagi dlrke
//
LOCUS       XP_016719606             242 aa            linear   PLN 06-AUG-2024
DEFINITION  multiple organellar RNA editing factor 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016719606
VERSION     XP_016719606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..242
                     /product="multiple organellar RNA editing factor 2,
                     chloroplastic"
                     /calculated_mol_wt=27508
     CDS             1..242
                     /gene="LOC107932165"
                     /coded_by="XM_016864117.2:1313..2041"
                     /db_xref="GeneID:107932165"
ORIGIN      
        1 maqtltraat stltrhltls filpkrllss ksithpppip slrfsrrplt plshavrclp
       61 laptrftsir crvnrsgnsa ysplnsgsnf sdrpptemap lfpgcdyehw livmdkpgge
      121 gatkqemidc yiktlakvvg seeeakkkiy nvsceryfgf gceideetsn kleglpgvlf
      181 vlpdsyvdpe ykdygaelfv ngeivqrspe rqrrvepqpq raqdrprynd rtryvrrren
      241 mr
//
LOCUS       XP_016719611            1038 aa            linear   PLN 06-AUG-2024
DEFINITION  protein unc-13 homolog [Gossypium hirsutum].
ACCESSION   XP_016719611
VERSION     XP_016719611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864122.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1038
                     /product="protein unc-13 homolog"
                     /calculated_mol_wt=115749
     CDS             1..1038
                     /gene="LOC107932169"
                     /coded_by="XM_016864122.2:246..3362"
                     /db_xref="GeneID:107932169"
ORIGIN      
        1 mvqsrreffs gplyglttsp ttssssanid lawpfgklet idhddireta yeifftscrs
       61 spgfggrnal mfysshenqh nhhgdegssg glssqgpgsp srranhgavn apssrvkral
      121 glkmvkrpqh trrmsmssln fssdggggss spsspgsspg vgsafstlpg rprrpltsae
      181 lmrqqmrvte qsdnrlrktl mrtlvgltgk ksdniilple lirfikpsef ndpheyhiwq
      241 krqlkileag lllypsvpie ksnslvtclr eiirssdfkp idisknsdtm rtlsntaisl
      301 awrstngspn nvphwadgfp fnihlytcll qaifdirdet qvldevdell elmkktwttl
      361 ginrpihnac ftwvlfqqyv stnqtepdll yaaytmltev endakkpdre asyvkllslm
      421 ldsiqnwaek rllsyhdyfn kgtisgiesl lplalssaki lgedvkimeg eggengdiml
      481 vdstsdrvdl yirssvknaf akmvenenak lanteekeep svtilkfakk tevlaekeke
      541 lfspilkrwh pvatgvavvt lhqcygallk qhlsgtrmln seivgvlqga sklekvlvqm
      601 vvedsveced ggkgiirems pyevdsiilk llrqwiderl kkgkdllsra ketenwnpks
      661 ksepyaqsae ellnlakemv kdffeipigi tndlildlae gleqlfqeyt tfvascgskk
      721 sylptlpplt rcnrdskffk iwkkaspcsv gvehmhrivn mdghhsrpst srgtqrlyir
      781 lntlhylitn lpsldkalat spkvstqnns sgrsgrgasy sffenvnasi qsacdhvsev
      841 aayrliflds nsvfyenlyv gdvansrirp avkilkqnlt llnaividrv qavamkevmk
      901 asfeaflmvl laggpsrtfn rsdhemindd fdslkrvfcn cgeglisddi vkkeadtieg
      961 vislmslste qltedlsiit cetsgiglvg tgqklpmppt tgrwdrsdpn tilrvlchrn
     1021 drvanqflkk sfqlakrk
//
LOCUS       XP_016719613             594 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 5.2 [Gossypium hirsutum].
ACCESSION   XP_016719613
VERSION     XP_016719613.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864124.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..594
                     /product="protein NRT1/ PTR FAMILY 5.2"
                     /calculated_mol_wt=66185
     Region          31..562
                     /region_name="MFS_NPF5"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; cd17417"
                     /db_xref="CDD:340975"
     Site            order(44..45,48..49,52,85,160..161,163..165,168,194,
                     197..198,201,339,342..343,346..348,351,382,386,467..468,
                     472,476,492,495..496,499..500,503)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340975"
     CDS             1..594
                     /gene="LOC107932170"
                     /coded_by="XM_016864124.2:150..1934"
                     /db_xref="GeneID:107932170"
ORIGIN      
        1 maveegiddy tqdgtvdlkg npvrrskrgg wtacsfvvvy evfermayyg issnlvlylt
       61 kklhqgtvks annvtnwvgt iwitpilgay vadahlgryw tfvfasliyv tgmslltlsv
      121 sipglkpppc hqpniddckk astlqlatff galytlaigt ggtkpnisti gadqfddfhp
      181 kekasklsff nwwmfsiffg tlfantvlvy iqdnvgwtlg yglptlglvi svmiflagtp
      241 fyrhrvpags pftkmamviv aaarkwrvpl psdpkelhel dleeyarngk fmigstptlr
      301 flnkaavktg stdpwmlsav tqveetkqml rmipiliatf vpstmiaqin tlfikqgttl
      361 drhignfkip paslagfvti smlvcvvlyd rffvpvirkw tnnprgitll qrmgiglvlh
      421 fiimavaslt eryrlnvakq hglvenggql pltifillpq fvlmgtadaf levakleffy
      481 dqapesmksl gtsysstslg ignflssfll stvsditqrd ghqgwilnnl nkshldyyya
      541 ffavlnflnf iffmamirfy vykaevsesm hvlteelkvm rlkasnqeaa kgia
//
LOCUS       XP_016719579             457 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein 1 [Gossypium hirsutum].
ACCESSION   XP_016719579
VERSION     XP_016719579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864090.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..457
                     /product="heterogeneous nuclear ribonucleoprotein 1"
                     /calculated_mol_wt=45822
     Region          8..78
                     /region_name="RRM1_hnRNPA_hnRNPD_like"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP
                     D subfamilies and similar proteins; cd12325"
                     /db_xref="CDD:409763"
     Site            order(9,11..14,36,38,47..49,51,73,76,78)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409763"
     Region          111..188
                     /region_name="RRM2_Hrp1p"
                     /note="RNA recognition motif 2 (RRM2) found in yeast
                     nuclear polyadenylated RNA-binding protein 4 (Hrp1p or
                     Nab4p) and similar proteins; cd12330"
                     /db_xref="CDD:409767"
     Site            order(113,115,140,142,153,155,181,183,185)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409767"
     CDS             1..457
                     /gene="LOC107932143"
                     /coded_by="XM_016864090.2:212..1585"
                     /db_xref="GeneID:107932143"
ORIGIN      
        1 mdsdqgklfi ggiswetsed rlkeyfgqyg dilqtvvmrd kvtgrprgfg fvvfsdpsvi
       61 dtvlqekhti dgrtveakra lsreeqqtsa rsgnfnqgrn sggggnirtk kifvgglppt
      121 ltedgfrqyf eayghvtdvv imydqntqrp rgfgfisfds eeavdrvlhk sfhdlngkqv
      181 evkpalpkda npggasrsmg ggaggfggyq gygssggnss sydgrmdsny mrgqgtgagf
      241 ppygssgyap gygygpasng vgygsygnyg gagagygapa gaaygnpnag yasgppgapr
      301 sswgtqtpsg ygamgygnaa pwgagpgsgg pgsaatgqsp tgatgyggqg ygyggyggnd
      361 gsygnagyga aggrsggtpn snasagggdl qgsgggymgg gygdvngssg ygnaswrsds
      421 sqgsgnyggs qangphggqg gygggyggaq grqaqqq
//
LOCUS       XP_016719584             457 aa            linear   PLN 06-AUG-2024
DEFINITION  heterogeneous nuclear ribonucleoprotein 1 [Gossypium hirsutum].
ACCESSION   XP_016719584
VERSION     XP_016719584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864095.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..457
                     /product="heterogeneous nuclear ribonucleoprotein 1"
                     /calculated_mol_wt=46057
     Region          8..78
                     /region_name="RRM1_hnRNPA_hnRNPD_like"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP
                     D subfamilies and similar proteins; cd12325"
                     /db_xref="CDD:409763"
     Site            order(9,11..14,36,38,47..49,51,73,76,78)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409763"
     Region          111..188
                     /region_name="RRM2_Hrp1p"
                     /note="RNA recognition motif 2 (RRM2) found in yeast
                     nuclear polyadenylated RNA-binding protein 4 (Hrp1p or
                     Nab4p) and similar proteins; cd12330"
                     /db_xref="CDD:409767"
     Site            order(113,115,140,142,153,155,181,183,185)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409767"
     CDS             1..457
                     /gene="LOC121203007"
                     /coded_by="XM_016864095.2:215..1588"
                     /db_xref="GeneID:121203007"
ORIGIN      
        1 mdsdqgklfi ggiswetsed rlkeyfgqyg dilqtvvmrd kvtgrprgfg fvvfsdpsvl
       61 dtvlqekhti dgrtveakra lsreeqqtsa rsgnfnqgrn sggggnirtk kifvgglppt
      121 ltedgfrqyf eayghvtdvv imydqntqrp rgfgfisfdt edavdrvlhk sfhdlngkqv
      181 evkralpkda npggasrtms ggasgfggyq gygssggnss sydgrmdsss ymraqgtgag
      241 fptygssgya pgygygpann gvgygsygny ggagagygap agaaygnpna gyasgppgap
      301 rsswgtqaps gygamgygna apwgagagsg gpgsaatgqs ptgagyggqg ygyggyggnd
      361 gsygnagyga aggrsggtpn snagagvedl qgsgggymvs gygdvngssg ygnatwrsds
      421 sqgsgnygga qangphggqg gygggyggaq grqaqqq
//
LOCUS       XP_016719586              99 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719586
VERSION     XP_016719586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864097.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..99
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11064
     CDS             1..99
                     /gene="LOC107932147"
                     /coded_by="XM_016864097.2:658..957"
                     /db_xref="GeneID:107932147"
ORIGIN      
        1 mdaapndvke vnghkrnsls sidstetedh tdgeeysesn slllpkkggm srksektrrk
       61 vqwndrngdk lveimefeps dvsdsedded kdsciciim
//
LOCUS       XP_040944108             205 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor [Gossypium hirsutum].
ACCESSION   XP_040944108
VERSION     XP_040944108.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088174.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="eukaryotic translation initiation factor"
                     /calculated_mol_wt=23094
     Region          31..189
                     /region_name="IF4E"
                     /note="Eukaryotic initiation factor 4E; pfam01652"
                     /db_xref="CDD:460281"
     CDS             1..205
                     /gene="LOC121203569"
                     /coded_by="XM_041088174.1:86..703"
                     /db_xref="GeneID:121203569"
ORIGIN      
        1 maseaavevn aisaaapeae attgaekqph klerkwtfwf dnqsrpkqga awgtslrkvy
       61 tfdtveefwc lydqifkpsk lpgnadfhlf kagiepkwed pecasggkws vtsnrkanle
      121 nmwletlmal igeqfdeade icgvvasvrq rqdklalwtk tatneaaqmg igrkwkeiig
      181 vndkitysfh ddsrrersak grynv
//
LOCUS       XP_040944109             140 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L23 [Gossypium hirsutum].
ACCESSION   XP_040944109
VERSION     XP_040944109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088175.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..140
                     /product="60S ribosomal protein L23"
                     /calculated_mol_wt=14882
     Region          2..140
                     /region_name="PTZ00054"
                     /note="60S ribosomal protein L23; Provisional"
                     /db_xref="CDD:185418"
     CDS             1..140
                     /gene="LOC121214473"
                     /coded_by="XM_041088175.1:144..566"
                     /db_xref="GeneID:121214473"
ORIGIN      
        1 mskrgrggsa gnkfrmslgl pvaatvncad ntgaknlyii svkgikgrln rlpsacvgdm
       61 vmatvkkgkp dlrkkvlpav ivrqrkpwrr kdgvymyfed nagvivnpkg emkgsaitgp
      121 igkecadlwp riasaanaiv
//
LOCUS       XP_040944111             626 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944111
VERSION     XP_040944111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088177.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..626
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68317
     Region          268..613
                     /region_name="DUF3527"
                     /note="Domain of unknown function (DUF3527); pfam12043"
                     /db_xref="CDD:463443"
     CDS             1..626
                     /gene="LOC121214474"
                     /coded_by="XM_041088177.1:447..2327"
                     /db_xref="GeneID:121214474"
ORIGIN      
        1 mddafgsgqk ddqgkdkplq nldnnrdmsg engldyselk lkrlarrvip qhalilsvgn
       61 rleagkspvk dsflpsifsv cntvprhvit ldekylrrcl elicinaaka aqcnisesls
      121 svemsilsdg lnspnigded acdfqrfvfd rplavgtggv virpvgqwvv ssktgsrsma
      181 nilkspllqk fgasdvspss nafkrsvsyd fmnspgsfsn ysshklgset pisknhkygs
      241 etahkqrvse sstdstcsdq sfsststais rgmlqctwkg gipyfvfsld nrkevyvanl
      301 skegsargkg pdfmysfhss kgshkehgis ddeshlvakm kvmtsfsicp qgskimetef
      361 vlfsgnetfn pevqtpsynh rknkglpkkv veafksshss kprtmrrlws ssivedsswg
      421 pcqdtvngpn sldkmdllee efspnlelas ivvrnhlpkn plpevggwgl kflkkagvta
      481 aasvpcncsl ntddcststd ilvpagihgg prndgpssli erwrsgghcd cggwdlgcpl
      541 tvlraraskq rglpstdpse acmlfdffvq gskhgsptlr ianvhdglyf lhfqttlsal
      601 qsfsiavayi haqspnfrqk nvklsr
//
LOCUS       XP_040944112             626 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944112
VERSION     XP_040944112.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088178.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..626
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68317
     Region          268..613
                     /region_name="DUF3527"
                     /note="Domain of unknown function (DUF3527); pfam12043"
                     /db_xref="CDD:463443"
     CDS             1..626
                     /gene="LOC121214474"
                     /coded_by="XM_041088178.1:538..2418"
                     /db_xref="GeneID:121214474"
ORIGIN      
        1 mddafgsgqk ddqgkdkplq nldnnrdmsg engldyselk lkrlarrvip qhalilsvgn
       61 rleagkspvk dsflpsifsv cntvprhvit ldekylrrcl elicinaaka aqcnisesls
      121 svemsilsdg lnspnigded acdfqrfvfd rplavgtggv virpvgqwvv ssktgsrsma
      181 nilkspllqk fgasdvspss nafkrsvsyd fmnspgsfsn ysshklgset pisknhkygs
      241 etahkqrvse sstdstcsdq sfsststais rgmlqctwkg gipyfvfsld nrkevyvanl
      301 skegsargkg pdfmysfhss kgshkehgis ddeshlvakm kvmtsfsicp qgskimetef
      361 vlfsgnetfn pevqtpsynh rknkglpkkv veafksshss kprtmrrlws ssivedsswg
      421 pcqdtvngpn sldkmdllee efspnlelas ivvrnhlpkn plpevggwgl kflkkagvta
      481 aasvpcncsl ntddcststd ilvpagihgg prndgpssli erwrsgghcd cggwdlgcpl
      541 tvlraraskq rglpstdpse acmlfdffvq gskhgsptlr ianvhdglyf lhfqttlsal
      601 qsfsiavayi haqspnfrqk nvklsr
//
LOCUS       XP_040944113             626 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944113
VERSION     XP_040944113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088179.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..626
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68317
     Region          268..613
                     /region_name="DUF3527"
                     /note="Domain of unknown function (DUF3527); pfam12043"
                     /db_xref="CDD:463443"
     CDS             1..626
                     /gene="LOC121214474"
                     /coded_by="XM_041088179.1:423..2303"
                     /db_xref="GeneID:121214474"
ORIGIN      
        1 mddafgsgqk ddqgkdkplq nldnnrdmsg engldyselk lkrlarrvip qhalilsvgn
       61 rleagkspvk dsflpsifsv cntvprhvit ldekylrrcl elicinaaka aqcnisesls
      121 svemsilsdg lnspnigded acdfqrfvfd rplavgtggv virpvgqwvv ssktgsrsma
      181 nilkspllqk fgasdvspss nafkrsvsyd fmnspgsfsn ysshklgset pisknhkygs
      241 etahkqrvse sstdstcsdq sfsststais rgmlqctwkg gipyfvfsld nrkevyvanl
      301 skegsargkg pdfmysfhss kgshkehgis ddeshlvakm kvmtsfsicp qgskimetef
      361 vlfsgnetfn pevqtpsynh rknkglpkkv veafksshss kprtmrrlws ssivedsswg
      421 pcqdtvngpn sldkmdllee efspnlelas ivvrnhlpkn plpevggwgl kflkkagvta
      481 aasvpcncsl ntddcststd ilvpagihgg prndgpssli erwrsgghcd cggwdlgcpl
      541 tvlraraskq rglpstdpse acmlfdffvq gskhgsptlr ianvhdglyf lhfqttlsal
      601 qsfsiavayi haqspnfrqk nvklsr
//
LOCUS       XP_040944114             626 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944114
VERSION     XP_040944114.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088180.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..626
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68317
     Region          268..613
                     /region_name="DUF3527"
                     /note="Domain of unknown function (DUF3527); pfam12043"
                     /db_xref="CDD:463443"
     CDS             1..626
                     /gene="LOC121214474"
                     /coded_by="XM_041088180.1:518..2398"
                     /db_xref="GeneID:121214474"
ORIGIN      
        1 mddafgsgqk ddqgkdkplq nldnnrdmsg engldyselk lkrlarrvip qhalilsvgn
       61 rleagkspvk dsflpsifsv cntvprhvit ldekylrrcl elicinaaka aqcnisesls
      121 svemsilsdg lnspnigded acdfqrfvfd rplavgtggv virpvgqwvv ssktgsrsma
      181 nilkspllqk fgasdvspss nafkrsvsyd fmnspgsfsn ysshklgset pisknhkygs
      241 etahkqrvse sstdstcsdq sfsststais rgmlqctwkg gipyfvfsld nrkevyvanl
      301 skegsargkg pdfmysfhss kgshkehgis ddeshlvakm kvmtsfsicp qgskimetef
      361 vlfsgnetfn pevqtpsynh rknkglpkkv veafksshss kprtmrrlws ssivedsswg
      421 pcqdtvngpn sldkmdllee efspnlelas ivvrnhlpkn plpevggwgl kflkkagvta
      481 aasvpcncsl ntddcststd ilvpagihgg prndgpssli erwrsgghcd cggwdlgcpl
      541 tvlraraskq rglpstdpse acmlfdffvq gskhgsptlr ianvhdglyf lhfqttlsal
      601 qsfsiavayi haqspnfrqk nvklsr
//
LOCUS       XP_040944115             519 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 19 [Gossypium hirsutum].
ACCESSION   XP_040944115
VERSION     XP_040944115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088181.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..519
                     /product="pre-mRNA-processing factor 19"
                     /calculated_mol_wt=56254
     Region          1..54
                     /region_name="RING-Ubox_PRP19"
                     /note="U-box domain, a modified RING finger, found in
                     pre-mRNA-processing factor 19 (Prp19) and similar
                     proteins; cd16656"
                     /db_xref="CDD:438318"
     Site            order(1,13,15,19..20,22,51..54)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438318"
     Region          67..131
                     /region_name="Prp19"
                     /note="Prp19/Pso4-like; pfam08606"
                     /db_xref="CDD:400774"
     Region          221..508
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          222..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(236,240,246..247,259..260,278,282,288..289,304..305,
                     322,327,333..334,347,366,371,377..378,390..391,409,413,
                     418..419,433..434,451,456,460..461,479..480,498,502,508)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          265..304
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          309..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          354..389
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          395..430
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          484..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..519
                     /gene="LOC107932162"
                     /coded_by="XM_041088181.1:184..1743"
                     /db_xref="GeneID:107932162"
ORIGIN      
        1 mncsisgevp edpvvskksg llyekrlier hiadygkcpv tgealtmedi vpiktgknvk
       61 prsltaasip gmlgmfqnew dalmlsnfal eqqlhtarqe lshalyqhda acrviarlkk
      121 erdeagslla qaerqaplpa saitavsngk raseeedmgp gakrmrhgvs dsiiaeltec
      181 naalsqqrkk rqipptlapi dalerytqls shplhktnkp gitsidinps kdivatggid
      241 snavlfgrts geilstlsgh skkvtsvkfv ahndvflsgs adktvriwqg sedgnyncrh
      301 ilkdhsaevq avtvhatnny fvtasldatw cfydlssglc ltqvedptns mgytsaafhp
      361 dglilgtgti gstvriwdvk srgnvanfdg htgavtaisf sengyflata ahdgvklwdl
      421 rklknfrsfe lydqdtptns vdfdhsgsyl amagsdirvy qvgsvkaewn ciktlpdlsg
      481 tgratcvkfg pdarylavgs mdrnlrvfgl peedastes
//
LOCUS       XP_040944116             519 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 19 [Gossypium hirsutum].
ACCESSION   XP_040944116
VERSION     XP_040944116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088182.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..519
                     /product="pre-mRNA-processing factor 19"
                     /calculated_mol_wt=56254
     Region          1..54
                     /region_name="RING-Ubox_PRP19"
                     /note="U-box domain, a modified RING finger, found in
                     pre-mRNA-processing factor 19 (Prp19) and similar
                     proteins; cd16656"
                     /db_xref="CDD:438318"
     Site            order(1,13,15,19..20,22,51..54)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438318"
     Region          67..131
                     /region_name="Prp19"
                     /note="Prp19/Pso4-like; pfam08606"
                     /db_xref="CDD:400774"
     Region          221..508
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          222..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(236,240,246..247,259..260,278,282,288..289,304..305,
                     322,327,333..334,347,366,371,377..378,390..391,409,413,
                     418..419,433..434,451,456,460..461,479..480,498,502,508)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          265..304
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          309..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          354..389
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          395..430
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          484..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..519
                     /gene="LOC107932162"
                     /coded_by="XM_041088182.1:184..1743"
                     /db_xref="GeneID:107932162"
ORIGIN      
        1 mncsisgevp edpvvskksg llyekrlier hiadygkcpv tgealtmedi vpiktgknvk
       61 prsltaasip gmlgmfqnew dalmlsnfal eqqlhtarqe lshalyqhda acrviarlkk
      121 erdeagslla qaerqaplpa saitavsngk raseeedmgp gakrmrhgvs dsiiaeltec
      181 naalsqqrkk rqipptlapi dalerytqls shplhktnkp gitsidinps kdivatggid
      241 snavlfgrts geilstlsgh skkvtsvkfv ahndvflsgs adktvriwqg sedgnyncrh
      301 ilkdhsaevq avtvhatnny fvtasldatw cfydlssglc ltqvedptns mgytsaafhp
      361 dglilgtgti gstvriwdvk srgnvanfdg htgavtaisf sengyflata ahdgvklwdl
      421 rklknfrsfe lydqdtptns vdfdhsgsyl amagsdirvy qvgsvkaewn ciktlpdlsg
      481 tgratcvkfg pdarylavgs mdrnlrvfgl peedastes
//
LOCUS       XP_016719601             519 aa            linear   PLN 06-AUG-2024
DEFINITION  pre-mRNA-processing factor 19 [Gossypium hirsutum].
ACCESSION   XP_016719601
VERSION     XP_016719601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..519
                     /product="pre-mRNA-processing factor 19"
                     /calculated_mol_wt=56254
     Region          1..54
                     /region_name="RING-Ubox_PRP19"
                     /note="U-box domain, a modified RING finger, found in
                     pre-mRNA-processing factor 19 (Prp19) and similar
                     proteins; cd16656"
                     /db_xref="CDD:438318"
     Site            order(1,13,15,19..20,22,51..54)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438318"
     Region          67..131
                     /region_name="Prp19"
                     /note="Prp19/Pso4-like; pfam08606"
                     /db_xref="CDD:400774"
     Region          221..508
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          222..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(236,240,246..247,259..260,278,282,288..289,304..305,
                     322,327,333..334,347,366,371,377..378,390..391,409,413,
                     418..419,433..434,451,456,460..461,479..480,498,502,508)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          265..304
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          309..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          354..389
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          395..430
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          484..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..519
                     /gene="LOC107932162"
                     /coded_by="XM_016864112.2:209..1768"
                     /db_xref="GeneID:107932162"
ORIGIN      
        1 mncsisgevp edpvvskksg llyekrlier hiadygkcpv tgealtmedi vpiktgknvk
       61 prsltaasip gmlgmfqnew dalmlsnfal eqqlhtarqe lshalyqhda acrviarlkk
      121 erdeagslla qaerqaplpa saitavsngk raseeedmgp gakrmrhgvs dsiiaeltec
      181 naalsqqrkk rqipptlapi dalerytqls shplhktnkp gitsidinps kdivatggid
      241 snavlfgrts geilstlsgh skkvtsvkfv ahndvflsgs adktvriwqg sedgnyncrh
      301 ilkdhsaevq avtvhatnny fvtasldatw cfydlssglc ltqvedptns mgytsaafhp
      361 dglilgtgti gstvriwdvk srgnvanfdg htgavtaisf sengyflata ahdgvklwdl
      421 rklknfrsfe lydqdtptns vdfdhsgsyl amagsdirvy qvgsvkaewn ciktlpdlsg
      481 tgratcvkfg pdarylavgs mdrnlrvfgl peedastes
//
LOCUS       XP_016719602             382 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719602
VERSION     XP_016719602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..382
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42958
     Region          221..373
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..382
                     /gene="LOC107932163"
                     /coded_by="XM_016864113.2:234..1382"
                     /db_xref="GeneID:107932163"
ORIGIN      
        1 mytlkdkaag slsrlfadsa shhsspssps sprdlsqarw ytkgskslss ifsyiipsls
       61 ygesklddhg gelkpvpslp vrwkkkfetr hevldsvkey ttctteelkk acedkkkiwt
      121 hsdnkqiari rlrsenkdcv sgrrstssde fqeareeqsp mksplkldef heareeqspm
      181 ksplkpsdef qeareeqspm kappklsdes vfinydlyef ltsslpnivk gcqwmllyst
      241 lkhgislrtl irksaelpgp cllitgdrqg avfgamlecp lkptpkrkyq gtnqtfvftt
      301 kygeprlfrp tganryyyic vndllalggg gnfalslded llsgtsgace tfgnlclahn
      361 qdfepkniel wgfthaskhf qn
//
LOCUS       XP_016719539             577 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At5g52630
            [Gossypium hirsutum].
ACCESSION   XP_016719539
VERSION     XP_016719539.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719539.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..577
                     /product="putative pentatricopeptide repeat-containing
                     protein At5g52630"
                     /calculated_mol_wt=63624
     Region          16..577
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          39..94
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          140..165
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          167..196
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          241..263
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          271..298
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          304..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          403..435
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..577
                     /gene="LOC107932103"
                     /coded_by="XM_016864050.2:125..1858"
                     /db_xref="GeneID:107932103"
ORIGIN      
        1 mnllgdptsa apalkpesia dprilhaqal kssrvdrsif nnlitlyaks nlldsslrvf
       61 kqipspnivs wtslisvhss splsltsfls mlrcpilpnq rtlaslfkac vslprcllfg
      121 lslhalsfkl slnaqpfsgs alvnfyskyr lpidarkvfd emperdevcy aaviiglaqn
      181 skpleslslf aamkssnvgs tmysvsgalr avadlaaleq crmihghavv tgfdknvivg
      241 salvdgygks glvsdarkvf deniavmniv gwnalmagya qqgdsssvik lfqsmanvrf
      301 vpdeysflav lsgfynaglv geseiwlkrm kleygiepgl ehytcligal gkagrledae
      361 riattipfnp daavwrslls scahhgaadm alrmarrlle ldpnddsayt iaanvlsvag
      421 rwsevadmrk lmkdrrvkke vgkswievkg evhmfmagdr kherteeiye klaelmesie
      481 klgykpvwde mlhevgkgek kealwyhsek lalaygivsg aapagkpmri iknlrickdc
      541 heafkyisra idkeiivrdv nryhtflngs ctcgdiw
//
LOCUS       XP_016719607             464 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719607
VERSION     XP_016719607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..464
                     /product="nuclear transport factor 2 isoform X1"
                     /calculated_mol_wt=51719
     Region          10..130
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(38,44,52,78,80..81,90,113,123..125,127,129)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(42,44..45,75..76,78,80..81,88,92..94,98,101..104,
                     107,113,123..125,127..130)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(45..46,67,70,93,95,97..98,101,104,126,128,130)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     Region          313..384
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cd00590"
                     /db_xref="CDD:409669"
     CDS             1..464
                     /gene="LOC107932166"
                     /coded_by="XM_016864118.2:103..1497"
                     /db_xref="GeneID:107932166"
ORIGIN      
        1 maspypipvs atqvgtyfvg qyyqvlqqep hlvhqfysds stmvrvdgns retaaamlqi
       61 halvmslnft gieiktaysl eswnggvlvm vsgsvqvkdf nfrrkfmqtf flapqekgyf
      121 vlndifyyid eeqihqhpav llaqhnldlk lnafmtnpep vpsymlggdi hgreflapdd
      181 akenglvdky rfpeqqlqha pesesivenn svhesnglll htlntvqehv pptieepvge
      241 pqkqtyasil rvakgqpapl vvpqvpvnkn mppvsdldhd hhhnnssnav evsgadmvne
      301 ispveyegel ksvyvrnlpn tvseseimee fkkfgeispd gvvirsrkdv gvcyafvefe
      361 dmtsvhnavk agiaqvagqq vyieerrpns yipsrggrrg rgrgsyptda srgrfgarsy
      421 grggaydgnd rdhsrsrgng yyrptprqdr vlpgyqasrn gets
//
LOCUS       XP_016719608             464 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719608
VERSION     XP_016719608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..464
                     /product="nuclear transport factor 2 isoform X1"
                     /calculated_mol_wt=51719
     Region          10..130
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(38,44,52,78,80..81,90,113,123..125,127,129)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(42,44..45,75..76,78,80..81,88,92..94,98,101..104,
                     107,113,123..125,127..130)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(45..46,67,70,93,95,97..98,101,104,126,128,130)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     Region          313..384
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cd00590"
                     /db_xref="CDD:409669"
     CDS             1..464
                     /gene="LOC107932166"
                     /coded_by="XM_016864119.2:198..1592"
                     /db_xref="GeneID:107932166"
ORIGIN      
        1 maspypipvs atqvgtyfvg qyyqvlqqep hlvhqfysds stmvrvdgns retaaamlqi
       61 halvmslnft gieiktaysl eswnggvlvm vsgsvqvkdf nfrrkfmqtf flapqekgyf
      121 vlndifyyid eeqihqhpav llaqhnldlk lnafmtnpep vpsymlggdi hgreflapdd
      181 akenglvdky rfpeqqlqha pesesivenn svhesnglll htlntvqehv pptieepvge
      241 pqkqtyasil rvakgqpapl vvpqvpvnkn mppvsdldhd hhhnnssnav evsgadmvne
      301 ispveyegel ksvyvrnlpn tvseseimee fkkfgeispd gvvirsrkdv gvcyafvefe
      361 dmtsvhnavk agiaqvagqq vyieerrpns yipsrggrrg rgrgsyptda srgrfgarsy
      421 grggaydgnd rdhsrsrgng yyrptprqdr vlpgyqasrn gets
//
LOCUS       XP_016719609             455 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016719609
VERSION     XP_016719609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864120.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..455
                     /product="nuclear transport factor 2 isoform X2"
                     /calculated_mol_wt=50895
     Region          2..121
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(29,35,43,69,71..72,81,104,114..116,118,120)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(33,35..36,66..67,69,71..72,79,83..85,89,92..95,98,
                     104,114..116,118..121)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(36..37,58,61,84,86,88..89,92,95,117,119,121)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     Region          304..375
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cd00590"
                     /db_xref="CDD:409669"
     CDS             1..455
                     /gene="LOC107932166"
                     /coded_by="XM_016864120.2:166..1533"
                     /db_xref="GeneID:107932166"
ORIGIN      
        1 mflkvgtyfv gqyyqvlqqe phlvhqfysd sstmvrvdgn sretaaamlq ihalvmslnf
       61 tgieiktays leswnggvlv mvsgsvqvkd fnfrrkfmqt fflapqekgy fvlndifyyi
      121 deeqihqhpa vllaqhnldl klnafmtnpe pvpsymlggd ihgreflapd dakenglvdk
      181 yrfpeqqlqh apesesiven nsvhesngll lhtlntvqeh vpptieepvg epqkqtyasi
      241 lrvakgqpap lvvpqvpvnk nmppvsdldh dhhhnnssna vevsgadmvn eispveyege
      301 lksvyvrnlp ntvseseime efkkfgeisp dgvvirsrkd vgvcyafvef edmtsvhnav
      361 kagiaqvagq qvyieerrpn syipsrggrr grgrgsyptd asrgrfgars ygrggaydgn
      421 drdhsrsrgn gyyrptprqd rvlpgyqasr ngets
//
LOCUS       XP_016719610             296 aa            linear   PLN 06-AUG-2024
DEFINITION  28 kDa ribonucleoprotein, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016719610
VERSION     XP_016719610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864121.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="28 kDa ribonucleoprotein, chloroplastic"
                     /calculated_mol_wt=32311
     Region          124..203
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          215..295
                     /region_name="RRM"
                     /note="RNA recognition motif (RRM) domain [Translation,
                     ribosomal structure and biogenesis]; COG0724"
                     /db_xref="CDD:440488"
     CDS             1..296
                     /gene="LOC107932168"
                     /coded_by="XM_016864121.2:129..1019"
                     /db_xref="GeneID:107932168"
ORIGIN      
        1 maaaaaaavv gssfsqsiht lkclrfkqla sadhhhtpll ripsarvlsp ssishhqsyf
       61 thelfpitvv tvqkwralkv saavaqqeta vtaespveee kveevegeae aeaeaavest
      121 vntklyfgnl pynvdsaqla giiqeygspe lvevlynret gksrgfafvt mstiedcnii
      181 iqnldgseyl grtlrvnfsd kprareplyp eteyklfvgn lswsvtseil tqafqeygnv
      241 vgarvlydge tgrsrgygfv systksemea aiqslngvel egralrvsla qgrqpa
//
LOCUS       XP_016719561             409 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719561
VERSION     XP_016719561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864072.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..409
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45580
     Region          10..138
                     /region_name="C2_SRC2_like"
                     /note="C2 domain present in Soybean genes Regulated by
                     Cold 2 (SRC2)-like proteins; cd04051"
                     /db_xref="CDD:176016"
     CDS             1..409
                     /gene="LOC107932120"
                     /coded_by="XM_016864072.2:221..1450"
                     /db_xref="GeneID:107932120"
ORIGIN      
        1 mstlapfqll elnvisaqdl kpvcrrkmrt yavawvhser klstridtqg htnptwndkf
       61 vfrvddefly sdtstlmiei yavhwfrdih vgtvrvlvqn lippvsqtrn rqelqlgmrf
      121 vafqvwrpsg rpqgilniga alldssmrsm plyfqmgssa vgyrhlmgee dafqssnvkp
      181 lsstkshtnn hqflvnglik pelrrtksds sslfepelrp rrsmkgssvv nggsvvngse
      241 igknnykvns rgssmvnyvf dkstdrkrkp spikgingpk lisppgksps gltggrkiwt
      301 dselgpspse vaaavlrnkn rkmeemessv gegwsldgsm egldsklerw rtelppvyds
      361 snefssflss qtpttatkks rhsrrrahkk glfscfgnic gceisvtcg
//
LOCUS       XP_016719578             197 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719578
VERSION     XP_016719578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864089.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..197
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21386
     Region          11..174
                     /region_name="USP-like"
                     /note="universal stress protein (USP) and similar
                     proteins; cd00293"
                     /db_xref="CDD:467483"
     CDS             1..197
                     /gene="LOC107932142"
                     /coded_by="XM_016864089.2:113..706"
                     /db_xref="GeneID:107932142"
ORIGIN      
        1 mmvtspsrsr nvmvvvdptp qsaaalqyal shalveqdkl ilfyienpss wknalatfir
       61 kssnssssap nsisegafgt dadfldqmrr acevaqpkin vkiektdmdg kdkasvilsk
      121 skdlridlii igqkrslssa ilgikrqngs lkgpkaidkv dylienspcs cvavqkkgqn
      181 ggyvlnskth knfwlla
//
LOCUS       XP_016719555             293 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719555
VERSION     XP_016719555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864066.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..293
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=32910
     Region          145..236
                     /region_name="Sec20"
                     /note="pfam03908"
                     /db_xref="CDD:112708"
     CDS             1..293
                     /gene="LOC107932115"
                     /coded_by="XM_016864066.2:156..1037"
                     /db_xref="GeneID:107932115"
ORIGIN      
        1 mdkvveevek tkkgwdeays ktqqhikeiq eygnstmeet knknslprln glaqdglall
       61 nslqfnldll apqlstddev qsakallktw rsqsqslrmn lrnanlqakd nmrktaqker
      121 elllgggees tvrrrnlqtk agmtsaaesi teslrrtrql mvqeverstn tlmtfeestg
      181 vlkkaeseyk ghrsllsrtr nllstmqrhd vidrivlivg filfscavly vvskrigilk
      241 lqrtitaaik agmagkpela rkaveeginr grfdgnvvpd kglplqqpmr del
//
LOCUS       XP_016719556             237 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719556
VERSION     XP_016719556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864067.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=27071
     Region          145..>213
                     /region_name="Sec20"
                     /note="pfam03908"
                     /db_xref="CDD:112708"
     CDS             1..237
                     /gene="LOC107932115"
                     /coded_by="XM_016864067.2:130..843"
                     /db_xref="GeneID:107932115"
ORIGIN      
        1 mdkvveevek tkkgwdeays ktqqhikeiq eygnstmeet knknslprln glaqdglall
       61 nslqfnldll apqlstddev qsakallktw rsqsqslrmn lrnanlqakd nmrktaqker
      121 elllgggees tvrrrnlqtk agmtsaaesi teslrrtrql mvqeverstn tlmtfeestg
      181 vlkkaeseyk ghrsllsrtr nllstmqrhd vidsthswvh lvlvcctlrc fktywht
//
LOCUS       XP_016719569             347 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate-dependent dioxygenase 19 [Gossypium hirsutum].
ACCESSION   XP_016719569
VERSION     XP_016719569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864080.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="2-oxoglutarate-dependent dioxygenase 19"
                     /calculated_mol_wt=39106
     Region          32..303
                     /region_name="PLN02947"
                     /note="oxidoreductase"
                     /db_xref="CDD:215510"
     CDS             1..347
                     /gene="LOC107932127"
                     /coded_by="XM_016864080.2:83..1126"
                     /db_xref="GeneID:107932127"
ORIGIN      
        1 mahsvemlgq ecfdlknkai ahlhdysfmd eiptidysll fskdhnerak slehlgkacq
       61 dfgcfyling veervvegal kgisdyfelt nqeerseylk knsmdrirwy lrsdagenre
      121 nikivthpey hcpskpdsck daigeylkgm hevelglaka isttlgyeet yiekefklea
      181 gfdvatlnly ppslqskgst glaehtdpgf fvsliqdvng glqvlshqgn witvniprnt
      241 ifigigdhle iltngkyksh ihqvildnne vkrismatlh gpsldtlvap apgfindshp
      301 ptyrgmtyke slelngfdei dvqssliqlq mplfliscmv lyfyncl
//
LOCUS       XP_016719559             335 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate-dependent dioxygenase 19 [Gossypium hirsutum].
ACCESSION   XP_016719559
VERSION     XP_016719559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864070.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="2-oxoglutarate-dependent dioxygenase 19"
                     /calculated_mol_wt=37605
     Region          32..303
                     /region_name="PLN02947"
                     /note="oxidoreductase"
                     /db_xref="CDD:215510"
     CDS             1..335
                     /gene="LOC107932117"
                     /coded_by="XM_016864070.2:132..1139"
                     /db_xref="GeneID:107932117"
ORIGIN      
        1 mahsvemlgq ecfdlknkai ahlhdysfmd eiptidysll fskdhnerak slehlgkacq
       61 dfgcfyling veervvegal kgisdyfelt nqeerseylk knsmdrirwy lrsdagenre
      121 nlkivthpey hcpskpdsck daigeylkgm hevelglaka isttlgyeet yiekefklea
      181 gfdvatlnly ppslqskgst glaehtdpgf fvsliqdvng glqvlshqgn witvniprnt
      241 ifvgigdhle iltngkyksh ihqvildnne vkrismatlh gpsldtfvas apgfindshp
      301 ptyrgmtyke slelngfdei dvqssliqlq mplsl
//
LOCUS       XP_016719543             874 aa            linear   PLN 06-AUG-2024
DEFINITION  MDIS1-interacting receptor like kinase 2 [Gossypium hirsutum].
ACCESSION   XP_016719543
VERSION     XP_016719543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..874
                     /product="MDIS1-interacting receptor like kinase 2"
                     /calculated_mol_wt=96453
     Region          29..849
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          102..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          126..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          198..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          294..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          342..365
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          366..389
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          390..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          414..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          438..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..487
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..874
                     /gene="LOC107932106"
                     /coded_by="XM_016864054.2:226..2850"
                     /db_xref="GeneID:107932106"
ORIGIN      
        1 mefelkvllf iivvavftsf adgdenggqi eallkwknsl enpssaslfs wdissnssfs
       61 pcekwvgiic ddgfvniihi nltsmglkgm lqgldfvsfp elvtldlsnn slygvipksi
      121 gmlanlkily vnanhfsgsi psaignltkl kglhlslnhl sgnipkeigl iaslvdlklp
      181 mnnlsgslpa eitnltsmki llmgnnrlsg ylpdsicsgg llerlsvhtn rfigpvpkdl
      241 kncsrlvrvr feeneltgni sedfgvypml nyidlsynkf fgeispnwgs nqnlksfkvs
      301 hnniagsips elanatklei ldlsynqlvg kiqnelgglk llfnlelndn qlsgnvptef
      361 rflselahln lavnrlsglv peefgqcskl lylnlsnnkl tamvpsqigr lhslqdldls
      421 hnlltgelps elgylsslet lnlshnqfsg yipntfdtms sltavdvsyn mlagplpnsk
      481 afrnapakaf ehnkglccna mmkkskrkys kmvlvsiiap ilstlillsi ilgtfftrss
      541 rarymvepeg agerencvti wgfdgklmye sliqatedfn pkycigrggs gsvykamlpt
      601 gqvfavkklh eidddddvan lksfsneida ltevkhrniv klcgfcshak ysflvyeyle
      661 ggslakmlas eekakqldwn kriqvvkgva naltymhhec fppvihrdis ssnilldsey
      721 earvsdfgta rilnpdsskl isfagtfgys apelaygtea nekcdvysyg vlalevimgk
      781 hpedlllsls lpesiighrf tvkdlldhrl pppedpvgee vvftiklafs clqtkpqsrp
      841 tmqqvsqkll trkptlsdpl emiklekllv dqil
//
LOCUS       XP_016719540             268 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880-like isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016719540
VERSION     XP_016719540.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864051.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..268
                     /product="uncharacterized protein At2g29880-like isoform
                     X1"
                     /calculated_mol_wt=30343
     Region          21..120
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..268
                     /gene="LOC107932104"
                     /coded_by="XM_016864051.2:330..1136"
                     /db_xref="GeneID:107932104"
ORIGIN      
        1 mssvsesnvs sqafqgtkrk wvpeedvasv symvdlhnvg tfnadtgfka gylnelekml
       61 ekalpntmlk arpniesrim llkrdwsivy dmlngqnnsg fgwdehrqlv vakdavwnsy
      121 lnsykkagqf rhrsfpyydq ltaiyardra tgkdaqtaad vieeinvqdv pttdineern
      181 efydcevdvs lddmdvsate pqpdrnqwgs tsskkkkknf datdhisssy hdaatllaen
      241 mraigeqisr iiafdvvvqq kseefqii
//
LOCUS       XP_040944117             236 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880-like isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944117
VERSION     XP_040944117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088183.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..236
                     /product="uncharacterized protein At2g29880-like isoform
                     X2"
                     /calculated_mol_wt=26840
     Region          <40..88
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..236
                     /gene="LOC107932104"
                     /coded_by="XM_041088183.1:401..1111"
                     /db_xref="GeneID:107932104"
ORIGIN      
        1 mvdlhnvgtf nadtgfkagy lnelekmlek alpntmlkar pniesrimll krdwsivydm
       61 lngqnnsgfg wdehrqlvva kdavwnsyln sykkagqfrh rsfpyydqlt aiyardratg
      121 kdaqtaadvi eeinvqdvpt tdineernef ydcevdvsld dmdvsatepq pdrnqwgsts
      181 skkkkknfda tdhisssyhd aatllaenmr aigeqisrii afdvvvqqks eefqii
//
LOCUS       XP_040944118             279 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB24 [Gossypium hirsutum].
ACCESSION   XP_040944118
VERSION     XP_040944118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088184.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..279
                     /product="transcription factor MYB24"
                     /calculated_mol_wt=32322
     Region          20..>122
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..279
                     /gene="LOC107932140"
                     /coded_by="XM_041088184.1:80..919"
                     /db_xref="GeneID:107932140"
ORIGIN      
        1 mswammaghl gwgfieegwr kgpwtaeedk llieyvklhg egrwnsvarl aglkrngksc
       61 rlrwvnylrp dlkrgqitph eesiiielha rwgnrwstia rslpgrtdne iknywrthfk
      121 kqnklpsdnn tsdhkskarl lkrqqfqqqq llqqqqqqlq lqqqqeqheq qlqlnqldmk
      181 rimslldete hkssvlpyvp qlrqematav pypnttveqq qaglfypmme fdgnvsgsgs
      241 dtsnevdvlw dglwnlddin gnfgatskvs fhnlatpfs
//
LOCUS       XP_016719552             637 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g12770 [Gossypium
            hirsutum].
ACCESSION   XP_016719552
VERSION     XP_016719552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..637
                     /product="pentatricopeptide repeat-containing protein
                     At3g12770"
                     /calculated_mol_wt=70444
     Region          <50..631
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          71..94
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          98..125
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          131..195
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          197..226
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          281..305
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          309..337
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          343..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          412..439
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          445..475
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          481..507
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          513..540
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          547..576
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..637
                     /gene="LOC107932113"
                     /coded_by="XM_016864063.2:252..2165"
                     /db_xref="GeneID:107932113"
ORIGIN      
        1 mtfcfpltry llfalkasry htsasvfdsp fnllhfldls sthqclqftk qaharvfllg
       61 ftqnpflask llslyalfgh ltqskavfds vqdknvylwn smingylksy syaeafdlfc
      121 kmdclnvkpd dftlatiskv ageirdlvvg klvhcqsvkt gfvvdivvsn slismygkcg
      181 efeamkkvfd emrernvgsw nalisgysns gdwrsvkdlw evvksmqfhg mqldgftvss
      241 llplssggct wgcnygrelh cytlknelds cfgsdvhlgc clidmysksg kvstgrnvfd
      301 rmgsrnvyaw tamingyien gdfeealvlf qemqlkdgie pnkvslvsvl pacgsyaglr
      361 agkqihgyat rkeltcdval rnalidmysk cgslnsarqv fdggsfgkda iswssmifgy
      421 glhgkgeeai slynqmlllg nkpdmitvvg vlsaccrsgl vneglslynt ikneygikpt
      481 veicacvvdm lgrsgqldqa ldfirtmpve pgpsvwgalv nasvmhgnie mqelahrfli
      541 hlepknpsny vslsnlhass krwdavaglr kmmkekglkk apgcswinin gkthcfyvad
      601 kahphstliy eildglilim kgagypidse elipits
//
LOCUS       XP_016719553             543 aa            linear   PLN 06-AUG-2024
DEFINITION  probable folate-biopterin transporter 9, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016719553
VERSION     XP_016719553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..543
                     /product="probable folate-biopterin transporter 9,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=59506
     Region          97..517
                     /region_name="BT1"
                     /note="BT1 family; pfam03092"
                     /db_xref="CDD:308617"
     CDS             1..543
                     /gene="LOC107932114"
                     /coded_by="XM_016864064.2:380..2011"
                     /db_xref="GeneID:107932114"
ORIGIN      
        1 miypvistkn pifltgskip rnqercskls sfqsrsifrs fhhqnpgikp ktqflnpvig
       61 tnlgevsvrk gkkkkeslwq qgvqemlglc glgywvqgfr cfpwlalnfh maynlnlnps
      121 tlqlvqnsgn lpmvakplfg ilsdalyigg ahripyicig vllqvlswgq lalfpvagqa
      181 lpalmacvll sntgaavtev akdaliteyg qkhritglqs yafmalaagg ilgnllggyf
      241 lvrlpprmmf lifsvllsiq llvslsasee clglarslgp vptgqsvsen irkqlsdlmi
      301 aisedsifrp ltwivasiam vpilsgsifc yqtqclhlnp svigmsrvig qlillsltvl
      361 ynhywkqipm rkligvvqil yassllldla lvreinlsig ipnevfalcf sglaetlaqf
      421 kilpfsvlla tlcprgcegs ltsflasalc lssifsgfwg vglaamlgir sndysnlpvg
      481 iliqflaall plgwihhvpm sqpvekkrkk gmskrnrktr rigrvvvgsv fayrreresd
      541 aqk
//
LOCUS       XP_040944119             396 aa            linear   PLN 06-AUG-2024
DEFINITION  probable folate-biopterin transporter 9, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944119
VERSION     XP_040944119.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088185.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="probable folate-biopterin transporter 9,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=42938
     Region          <10..373
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(48..49,51..53,56,76,79..80,83,167,170..171,174..176,
                     180,207,211,262..263,267,271,295,298..299,302..303,306)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..396
                     /gene="LOC107932114"
                     /coded_by="XM_041088185.1:804..1994"
                     /db_xref="GeneID:107932114"
ORIGIN      
        1 mlsilgvlig ylifalevls wgqlalfpva gqalpalmac vllsntgaav tevakdalit
       61 eygqkhritg lqsyafmala aggilgnllg gyflvrlppr mmflifsvll siqllvslsa
      121 seeclglars lgpvptgqsv senirkqlsd lmiaisedsi frpltwivas iamvpilsgs
      181 ifcyqtqclh lnpsvigmsr vigqlillsl tvlynhywkq ipmrkligvv qilyasslll
      241 dlalvreinl sigipnevfa lcfsglaetl aqfkilpfsv llatlcprgc egsltsflas
      301 alclssifsg fwgvglaaml girsndysnl pvgiliqfla allplgwihh vpmsqpvekk
      361 rkkgmskrnr ktrrigrvvv gsvfayrrer esdaqk
//
LOCUS       XP_016719590             539 aa            linear   PLN 06-AUG-2024
DEFINITION  ammonium transporter 1 member 1 [Gossypium hirsutum].
ACCESSION   XP_016719590
VERSION     XP_016719590.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719590.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..539
                     /product="ammonium transporter 1 member 1"
                     /calculated_mol_wt=58429
     Region          90..512
                     /region_name="amt"
                     /note="ammonium transporter; TIGR00836"
                     /db_xref="CDD:273292"
     CDS             1..539
                     /gene="LOC107932152"
                     /coded_by="XM_016864101.2:53..1672"
                     /db_xref="GeneID:107932152"
ORIGIN      
        1 mytyylykst qnvngkvlll hkvflykhqp lfhalpitlf pshfrsssff qprpmstcsq
       61 dlapllgvng tgaadyicgk fsdasyavdn tyllfsaylv fsmqlgfaml cagsvraknt
      121 mnimltnvld aatgglfyyl fgfafafgsp sngfigrhnf alesipsslf dysnflyqwa
      181 faiaaagits gsiaertqfv ayliyssflt gfvypvvshw fwaadgwasa lrtddflfgs
      241 gvidfagsgv vhivggvagl wgaliegpri grfdhsgrsv alrghsatlv vlgtfmlwfg
      301 wygfnpgsfn kissfytsgn yygqwsavgr tavtttlagc taalttlfgk riltghwnvt
      361 dvcngllggf aaitsgcsvv epwaaiicgf vaalvligcn klaekvkydd pleaaqlhgg
      421 cgawgvlftg lfaseklvkq vypdrpakyg lfmggggklf aaqiiqilvi vgwvsatmgt
      481 lfyflhkfgl lrisvedema gmdltrhggl ayvyhdedes qkngiqmrki esfptppsv
//
LOCUS       XP_016719562             539 aa            linear   PLN 06-AUG-2024
DEFINITION  S-type anion channel SLAH3 [Gossypium hirsutum].
ACCESSION   XP_016719562
VERSION     XP_016719562.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864073.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719562.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..539
                     /product="S-type anion channel SLAH3"
                     /calculated_mol_wt=60350
     Region          172..475
                     /region_name="TDT_SLAC1_like"
                     /note="Tellurite-resistance/Dicarboxylate Transporter
                     (TDT) family includes SLAC1 (Slow Anion Channel-Associated
                     1); cd09323"
                     /db_xref="CDD:187763"
     Site            432
                     /site_type="other"
                     /note="gating phenylalanine in ion channel"
                     /db_xref="CDD:187763"
     CDS             1..539
                     /gene="LOC107932121"
                     /coded_by="XM_016864073.2:125..1744"
                     /db_xref="GeneID:107932121"
ORIGIN      
        1 mdhngehpas vevkechasg fdsisvenet nnfsnqikvw qpsnvderkl cismpssptn
       61 hchvdeakgl engvpdssan ikninqqqhp nhkklkdkrf dsfktwsgrl erqlsnlrgk
      121 pqeiesdsen ieplalpvdr ffdalegpel etlraseeiv lpdnktwpfl lrypisafgi
      181 clgvssqaim wktlatspst kflhinliin hilwwisval vaivasiyll kvilyfeavr
      241 reyyhpirvn fffapwiall flalgvppsl vsklpvplwy vlmtpifcle lkiygqwmsg
      301 gqrrlskvan psnhlsivgn fvgallgasm glkegpifff avglahyvvl fvtlyqrlpt
      361 ndtlpkdlhp vfflfvaaps vasmawatiq gsfdngaria yfialflyfs lavrvnffrg
      421 fkfslawway tfpmtgaaia amryasevtn ivtqtlcvtl sivatltvta llvttilhaf
      481 vlrdlfpndi aiaisdrkpk phkkwfnlsd ietflkfass dnkdieaalk iptpeatsv
//
LOCUS       XP_016719596             248 aa            linear   PLN 06-AUG-2024
DEFINITION  BI1-like protein [Gossypium hirsutum].
ACCESSION   XP_016719596
VERSION     XP_016719596.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719596.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..248
                     /product="BI1-like protein"
                     /calculated_mol_wt=27435
     Region          31..247
                     /region_name="BI-1-like"
                     /note="BAX inhibitor (BI)-1/YccA-like protein family;
                     cl00473"
                     /db_xref="CDD:469783"
     CDS             1..248
                     /gene="LOC107932156"
                     /coded_by="XM_016864107.2:762..1508"
                     /db_xref="GeneID:107932156"
ORIGIN      
        1 mygyeslsrt darkaeqidl esgetlypgl sygenelrwg firkvygila vqlllttmvs
       61 afvvsspsii dllrgnsgll lflcliplil vwplhvyhqk hplnfiilga ftvflsltig
      121 vscantderi vlealiltaa vvtsltgytf waskngkdfn ylgpilftsl vilvltsliq
      181 mffplgpttt aiygaisalv fcgfivydtd nlikrftydd yilasatlyl dilnlfisim
      241 rvlrsgds
//
LOCUS       XP_016719597              60 aa            linear   PLN 06-AUG-2024
DEFINITION  small acidic protein 1 [Gossypium hirsutum].
ACCESSION   XP_016719597
VERSION     XP_016719597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864108.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..60
                     /product="small acidic protein 1"
                     /calculated_mol_wt=6594
     CDS             1..60
                     /gene="LOC107932158"
                     /coded_by="XM_016864108.2:1..183"
                     /db_xref="GeneID:107932158"
ORIGIN      
        1 mrpmpmefvt dpddqgsame vddvdtpeif gegviasdnk ladadffnnf eddyddsdid
//
LOCUS       XP_016719560             337 aa            linear   PLN 06-AUG-2024
DEFINITION  S-adenosylmethionine decarboxylase proenzyme 4 [Gossypium
            hirsutum].
ACCESSION   XP_016719560
VERSION     XP_016719560.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..337
                     /product="S-adenosylmethionine decarboxylase proenzyme 4"
                     /calculated_mol_wt=37579
     Region          1..336
                     /region_name="PLN02524"
                     /note="S-adenosylmethionine decarboxylase"
                     /db_xref="CDD:215287"
     CDS             1..337
                     /gene="LOC107932119"
                     /coded_by="XM_016864071.2:212..1225"
                     /db_xref="GeneID:107932119"
ORIGIN      
        1 mavsgfegfe krlelhffgd dndptvttmg lrlldfesle nvlrvvqctv vsavgnhffd
       61 ayvlsesslf vyptkiiikt cgttqllksi rplihlaknl glticgcryt rgtfifpksq
      121 pfphinfkqe viyieenlpn nlcfrkasvm psknpsyswh vfssasdngv hfsdgeftve
      181 vcmteldrvl arkffktggd saakemtdlt gigninpral icdfvfdpcg ysmngvdgdr
      241 ystihvtped gfsyasfeyv gsvyddqddi vetlkkavqv fkpatvsvst tshrrevwtr
      301 vahameplgl kcrsfamdef stagtvvfqt ftaarrk
//
LOCUS       XP_016719616             391 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 35 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719616
VERSION     XP_016719616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="probable protein phosphatase 2C 35 isoform X1"
                     /calculated_mol_wt=42538
     Region          71..344
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(73..74,95..97,291,335)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..391
                     /gene="LOC107932172"
                     /coded_by="XM_016864127.2:745..1920"
                     /db_xref="GeneID:107932172"
ORIGIN      
        1 mgcahgkccn rdsstsdeds ghyqrgirpy knkdgltqrs lelvhvpshn ftlqyssltq
       61 ngyypdttdr enqdsfcikt qiqgnpnvhf fgvfdghgqy gaqcsnfvkd klveilssdp
      121 tllddplkaf nsaflatnse lrdseiddal sgttaitvlv vgdtlyvanv gdsraviavk
      181 dgdrilaedl svdqtpfrkd eydrvklfga rvlsvdqveg lkdpdiqhwg deeshggdpp
      241 rlwvpngmyp gtaftrsvgd staekigvia vpeisivrft pshlffvvas dgvfeflssq
      301 tvvnmaaayk dpndacaaia gdsykcwlel enrtdditii ivqikglsnq sgvgttdsev
      361 hsrpcqiggs mnqstaivpp lmhqtlesdm g
//
LOCUS       XP_016719617             390 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 35 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016719617
VERSION     XP_016719617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..390
                     /product="probable protein phosphatase 2C 35 isoform X2"
                     /calculated_mol_wt=42410
     Region          71..344
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(73..74,95..97,291,335)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..390
                     /gene="LOC107932172"
                     /coded_by="XM_016864128.2:788..1960"
                     /db_xref="GeneID:107932172"
ORIGIN      
        1 mgcahgkccn rdsstsdeds ghyqrgirpy knkdgltqrs lelvhvpshn ftlqyssltq
       61 ngyypdttdr enqdsfcikt qiqgnpnvhf fgvfdghgqy gaqcsnfvkd klveilssdp
      121 tllddplkaf nsaflatnse lrdseiddal sgttaitvlv vgdtlyvanv gdsraviavk
      181 dgdrilaedl svdqtpfrkd eydrvklfga rvlsvdqveg lkdpdiqhwg deeshggdpp
      241 rlwvpngmyp gtaftrsvgd staekigvia vpeisivrft pshlffvvas dgvfeflssq
      301 tvvnmaaayk dpndacaaia gdsykcwlel enrtdditii ivqikglsns gvgttdsevh
      361 srpcqiggsm nqstaivppl mhqtlesdmg
//
LOCUS       XP_016719588             889 aa            linear   PLN 06-AUG-2024
DEFINITION  putative E3 ubiquitin-protein ligase RF298 [Gossypium hirsutum].
ACCESSION   XP_016719588
VERSION     XP_016719588.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864099.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719588.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..889
                     /product="putative E3 ubiquitin-protein ligase RF298"
                     /calculated_mol_wt=98724
     Region          135..249
                     /region_name="DUF6592"
                     /note="Family of unknown function (DUF6592); pfam20235"
                     /db_xref="CDD:466386"
     Region          <540..785
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     Region          830..884
                     /region_name="RING-HC_MIP1-like"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana MND1-interacting protein 1 (MIP1) and similar
                     proteins; cd23128"
                     /db_xref="CDD:438490"
     CDS             1..889
                     /gene="LOC107932151"
                     /coded_by="XM_016864099.2:333..3002"
                     /db_xref="GeneID:107932151"
ORIGIN      
        1 masmvlkgss sgnhvsplls iqekgsrnkr kfradlplgd qnkivtspqn gcpsyefcae
       61 kfeitpvhgq asacdlcsvs qdhsgglkld lrlsstlgss evgpsrakee leadefqdad
      121 wsdltesqle elvlsnldti fksaikkiva ygyteeivtk avlrsglcyg ckdtvsnivd
      181 ntlaylrsgq dynpsrdhyf edlqqmekyi ltelvcvlre vrpffstgda mwcllicdmn
      241 vshacamdgd plsgfagdgg sngisfssnq pqlkpeakts elnlpnpcrq vppfpcshss
      301 ppevpstgis sttksknsvv lsgivsekeg tnstadsadk tfsavgtsqf stmeekfvgs
      361 rkthstkref lrqkslhlek nyktygskgs srakmsslgg lildkklksv snsatvnikg
      421 aslkikamga dvsqdneshl lanlgpssst sfcldndsni savpktdiat isppvnmppe
      481 llpmnnpptl sttdtelsls lptksnsivv ppvshfkvan psyvgmpfgn slgdwvpqdk
      541 kdemilklvp rvqelqnqlq dwtewtnqkv mqaarrlskd kvelktlrqe keevellkke
      601 klsleentrk klvemdvals kasgqveran atvrrfeven aalrqemeaa klraaesaas
      661 cqevskrekk tlmkvqswdk qknlfqeelm tekrkvtqll helqlakviq eqfevkwqqe
      721 qkakeevvtq aslvrkereq ieastklkdd mikskaetsl qkykediqkl eqeisrlrlk
      781 mdsskiaalr rgidgsyvky ismtqkksrt pfisevvtdf qdfsgeggvk rerecvmcls
      841 eemsvvfvpc ahqvvcttcn elhkkqgmkd cpscrsliqr ripvryars
//
LOCUS       XP_016719589             889 aa            linear   PLN 06-AUG-2024
DEFINITION  putative E3 ubiquitin-protein ligase RF298 [Gossypium hirsutum].
ACCESSION   XP_016719589
VERSION     XP_016719589.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719589.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..889
                     /product="putative E3 ubiquitin-protein ligase RF298"
                     /calculated_mol_wt=98724
     Region          135..249
                     /region_name="DUF6592"
                     /note="Family of unknown function (DUF6592); pfam20235"
                     /db_xref="CDD:466386"
     Region          <540..785
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     Region          830..884
                     /region_name="RING-HC_MIP1-like"
                     /note="RING finger, HC subclass, found in Arabidopsis
                     thaliana MND1-interacting protein 1 (MIP1) and similar
                     proteins; cd23128"
                     /db_xref="CDD:438490"
     CDS             1..889
                     /gene="LOC107932151"
                     /coded_by="XM_016864100.2:542..3211"
                     /db_xref="GeneID:107932151"
ORIGIN      
        1 masmvlkgss sgnhvsplls iqekgsrnkr kfradlplgd qnkivtspqn gcpsyefcae
       61 kfeitpvhgq asacdlcsvs qdhsgglkld lrlsstlgss evgpsrakee leadefqdad
      121 wsdltesqle elvlsnldti fksaikkiva ygyteeivtk avlrsglcyg ckdtvsnivd
      181 ntlaylrsgq dynpsrdhyf edlqqmekyi ltelvcvlre vrpffstgda mwcllicdmn
      241 vshacamdgd plsgfagdgg sngisfssnq pqlkpeakts elnlpnpcrq vppfpcshss
      301 ppevpstgis sttksknsvv lsgivsekeg tnstadsadk tfsavgtsqf stmeekfvgs
      361 rkthstkref lrqkslhlek nyktygskgs srakmsslgg lildkklksv snsatvnikg
      421 aslkikamga dvsqdneshl lanlgpssst sfcldndsni savpktdiat isppvnmppe
      481 llpmnnpptl sttdtelsls lptksnsivv ppvshfkvan psyvgmpfgn slgdwvpqdk
      541 kdemilklvp rvqelqnqlq dwtewtnqkv mqaarrlskd kvelktlrqe keevellkke
      601 klsleentrk klvemdvals kasgqveran atvrrfeven aalrqemeaa klraaesaas
      661 cqevskrekk tlmkvqswdk qknlfqeelm tekrkvtqll helqlakviq eqfevkwqqe
      721 qkakeevvtq aslvrkereq ieastklkdd mikskaetsl qkykediqkl eqeisrlrlk
      781 mdsskiaalr rgidgsyvky ismtqkksrt pfisevvtdf qdfsgeggvk rerecvmcls
      841 eemsvvfvpc ahqvvcttcn elhkkqgmkd cpscrsliqr ripvryars
//
LOCUS       XP_016719544             324 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g15545 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719544
VERSION     XP_016719544.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864055.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="uncharacterized protein At4g15545 isoform X1"
                     /calculated_mol_wt=35289
     Region          <24..237
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..324
                     /gene="LOC107932108"
                     /coded_by="XM_016864055.2:203..1177"
                     /db_xref="GeneID:107932108"
ORIGIN      
        1 mlaeesdgst stfdlpdeil rvlpsdpfqq ldvarkltsi alsarislle aetsslqskl
       61 aekdqqiadl yaqiealdas lsqtsdklak adeekgsllk dnasltstlk klqrdvskle
      121 vfrktlmqsl qedeessagg privakptps dddvtfpsgs sficsqysst gnsfaedhea
      181 dasrpgipql lasqtstprl tppgspprvs gsasptrtsm pvsprkhsvs fstsrgmfdd
      241 rpsmsssdsg sqigrtrvdg keffrqarsr lsyeqfgafl tnvkdlnsqk qtkeetlrka
      301 neifgpdnrd lyaifeglin rnlh
//
LOCUS       XP_016719545             321 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g15545 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016719545
VERSION     XP_016719545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864056.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..321
                     /product="uncharacterized protein At4g15545 isoform X2"
                     /calculated_mol_wt=34986
     Region          <24..234
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          <42..>144
                     /region_name="COG2433"
                     /note="Possible nuclease of RNase H fold, RuvC/YqgF family
                     [General function prediction only]"
                     /db_xref="CDD:441980"
     CDS             1..321
                     /gene="LOC107932108"
                     /coded_by="XM_016864056.2:45..1010"
                     /db_xref="GeneID:107932108"
ORIGIN      
        1 mlaeesdgst stfdlpdeil rvlpsdpfqq ldvarkltsi alsarislle aetsslqskl
       61 aekdqqiadl yaqiealdas lsqtsdklak adeekgsllk dnasltstlk klqrdvskle
      121 vfrktlmqsl qedeaggpri vakptpsddd vtfpsgssfi csqysstgns faedheadas
      181 rpgipqllas qtstprltpp gspprvsgsa sptrtsmpvs prkhsvsfst srgmfddrps
      241 msssdsgsqi grtrvdgkef frqarsrlsy eqfgafltnv kdlnsqkqtk eetlrkanei
      301 fgpdnrdlya ifeglinrnl h
//
LOCUS       XP_016719546             297 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g15545 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016719546
VERSION     XP_016719546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864057.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..297
                     /product="uncharacterized protein At4g15545 isoform X3"
                     /calculated_mol_wt=32169
     Region          <24..237
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..297
                     /gene="LOC107932108"
                     /coded_by="XM_016864057.2:51..944"
                     /db_xref="GeneID:107932108"
ORIGIN      
        1 mlaeesdgst stfdlpdeil rvlpsdpfqq ldvarkltsi alsarislle aetsslqskl
       61 aekdqqiadl yaqiealdas lsqtsdklak adeekgsllk dnasltstlk klqrdvskle
      121 vfrktlmqsl qedeessagg privakptps dddvtfpsgs sficsqysst gnsfaedhea
      181 dasrpgipql lasqtstprl tppgspprvs gsasptrtsm pvsprkhsvs fstsrgmfdd
      241 rpsmsssdsg sqigrtrvdg keffrqarsr lsyeqfgafl tnvkdlnsqk qtkelfm
//
LOCUS       XP_016719548             882 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719548
VERSION     XP_016719548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864059.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..882
                     /product="uncharacterized protein"
                     /calculated_mol_wt=98938
     Region          67..386
                     /region_name="nuc_hydro"
                     /note="Nucleoside hydrolases. Nucleoside hydrolases cleave
                     the N-glycosidic bond in nucleosides generating ribose and
                     the respective base. These enzymes vary in their substrate
                     specificity. This group contains eukaryotic, bacterial and
                     archeal proteins similar...; cl00226"
                     /db_xref="CDD:469670"
     Site            order(74,78..79,189,246,258,260,335)
                     /site_type="active"
                     /db_xref="CDD:238257"
     Region          501..856
                     /region_name="nuc_hydro"
                     /note="Nucleoside hydrolases. Nucleoside hydrolases cleave
                     the N-glycosidic bond in nucleosides generating ribose and
                     the respective base. These enzymes vary in their substrate
                     specificity. This group contains eukaryotic, bacterial and
                     archeal proteins similar...; cl00226"
                     /db_xref="CDD:469670"
     Site            order(508,512..513,551,663,701,712,714,785)
                     /site_type="active"
                     /db_xref="CDD:238257"
     CDS             1..882
                     /gene="LOC107932109"
                     /coded_by="XM_016864059.2:1..2649"
                     /db_xref="GeneID:107932109"
ORIGIN      
        1 mfwlrkfwii ilvlvvdvfg akvhavsakp rrilldtdvd tddffallyl lklnrsefel
       61 egitintnaw tdaghavnqi ydilymmgrd diavgvggeg giledgtilp nvggylpiie
      121 qgmttaggcr yrqaipvglr grldfdtnyg irksflpqgs rkysplkqpt aqqvmiekts
      181 agpitvfvtg ahtnfavflm knphlkrnie hinvmgggvr snnptgccpk hgtphchprq
      241 cgdpgnlftd yntnpyaefn ifgdpfaayq vfhsgipvtl vsldatntip iteeffkafe
      301 qsqwtyeaqy cfkslkmard twfddrfyts yfmwdsfssg vavsimrnyg knngenefae
      361 meymnisvvt snepygicdg snplfdgrhf pkfklnksgl hsghvqmglr dpfcfvengk
      421 gkckdgytee gtgpdsvrvl vatkakpnhd ltsklnreff tnfldvlnrp entarfnltt
      481 efphfrqafy epdfknktlg kpvvfdmdms agdfmalfyl lkvpvellnl kailvsptgw
      541 anaaaidivy dllhmmgrdd ipvglgdvfa msqsdqifhl vgdckyakai phgsggflds
      601 dtlyglardl prsprrytae nsvkfgaprd tdqpelrqpl aleiwtsilk tmdpgskitv
      661 ltngpltsla kiitrtnsts fiqnvyivgg hisrssldeg nvftipsnky aefnlfldpi
      721 aaktvfksgl nitliplgtq rkvsrfieti krlqltrtpe arfvksllsr lytlkqahhr
      781 yrhtdiffge ilgailmagd qrklkptmqe mpikviaegi eaidgqilid ekhgklvqil
      841 knidpmayyd qfadrlgdek rsavlgsyde qrkmwntppn rt
//
LOCUS       XP_016719557             480 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 16 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719557
VERSION     XP_016719557.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864068.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719557.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..480
                     /product="sugar transporter ERD6-like 16 isoform X1"
                     /calculated_mol_wt=51676
     Region          45..473
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(58,62,176,179..180,183,290..291,295..296,299..300,
                     325,390..391,394..395,399,422..423,426)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..480
                     /gene="LOC107932116"
                     /coded_by="XM_016864068.2:258..1700"
                     /db_xref="GeneID:107932116"
ORIGIN      
        1 mtirqfkdve sgeingledl ekpligadde kivvhhengs iwmvllctfv avcgsfefgs
       61 cvgysaptqs aisedlnlsl sefsmfgsil tigamlgavt sgriadmigr kgamrlsagf
      121 citgwlavyf skgavsldig rfstgygigv fsyvvpifia eiapknlrgg lttlnqlmiv
      181 tgssvaflig tiipwrelal tglvpciflf vglcfipesp rwlakvgqnk efqvalrklr
      241 gkdaditqea aeiqmyietl qslpktrmld lfqpkyirsv migvalmvfq qfggingisf
      301 yasetfasag lssgkagtia yacvqvpitv vgamlmdksg rrplimvsat gtflgcfmsg
      361 tsfylkehnl lpewvpilav ggvliyvasf sigmgavpsv imseifpini kgvagslvvl
      421 vnwlgawavs ytfnflmsws ssgtffiysg fslmtilyva kfvpetkgkt leeiqacins
//
LOCUS       XP_016719558             396 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 16 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016719558
VERSION     XP_016719558.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864069.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719558.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="sugar transporter ERD6-like 16 isoform X2"
                     /calculated_mol_wt=42538
     Region          1..389
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(92,95..96,99,206..207,211..212,215..216,241,
                     306..307,310..311,315,338..339,342)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..396
                     /gene="LOC107932116"
                     /coded_by="XM_016864069.2:346..1536"
                     /db_xref="GeneID:107932116"
ORIGIN      
        1 mfgsiltiga mlgavtsgri admigrkgam rlsagfcitg wlavyfskga vsldigrfst
       61 gygigvfsyv vpifiaeiap knlrgglttl nqlmivtgss vafligtiip wrelaltglv
      121 pciflfvglc fipesprwla kvgqnkefqv alrklrgkda ditqeaaeiq myietlqslp
      181 ktrmldlfqp kyirsvmigv almvfqqfgg ingisfyase tfasaglssg kagtiayacv
      241 qvpitvvgam lmdksgrrpl imvsatgtfl gcfmsgtsfy lkehnllpew vpilavggvl
      301 iyvasfsigm gavpsvimse ifpinikgva gslvvlvnwl gawavsytfn flmswsssgt
      361 ffiysgfslm tilyvakfvp etkgktleei qacins
//
LOCUS       XP_040944121             804 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944121
VERSION     XP_040944121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088187.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..804
                     /product="squamosa promoter-binding-like protein 7 isoform
                     X1"
                     /calculated_mol_wt=89685
     Region          142..216
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..804
                     /gene="LOC107932153"
                     /coded_by="XM_041088187.1:93..2507"
                     /db_xref="GeneID:107932153"
ORIGIN      
        1 meqpasspnt tlrgsprskd pqmdvhlpvt eadpssssvw dwgdlldftl ddhfsisldd
       61 gnmypppfea spsvpdpepv sgpdrvrkrd prmtcsnflt grvpcacpei deqmekleee
      121 eagapgkkra rtgrvgsgts rcqipgcevd itelkgyhrr hrvclqcans stvlingesk
      181 rycqqcgkfh llsdfdegkr scrrklerhn nrrrrkpvgs ktevnkeslg avqsediacd
      241 geagkddlsl sgqtaedppf esedglvsad csapmlqtvn ndstvalidt gtdggkedlk
      301 fsistsyhdn rtayssmcpt grisfklydw npaefprrlr hqifqwladm pvelegyirp
      361 gctiltvfis mpknmwmkls enpmtymhdf vftpgrmlhg rglmtihlnn mifrtskggs
      421 slvkldmgvq aprlhyvhps cfeagkpmef vacgsnllqp klqflvsfag rylpydycla
      481 sahvnategs sscdhllyki yvpqtesdlf gpvfievenq sglsnfipvl igdkdvcsem
      541 kviqqgfdas lfwggsqisa nrsscetstl rqkayselvl diawllrepk senfqetmas
      601 sqiqrfncll nfliqnkstv ilkkvlqnlk nvmeeagfng tddpdtrllk kymdygrdil
      661 nnklqegerp vllseyieqe gkwnsqsslk ndglfvpngs qdlgertnak fqtmmasttl
      721 trsetvplln keivmnvnls kdlprkscst ifatttlrsc palfvvataa iclgicavfl
      781 hpnkvgefav tirrclskrs yiie
//
LOCUS       XP_040944122             706 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944122
VERSION     XP_040944122.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088188.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..706
                     /product="squamosa promoter-binding-like protein 7 isoform
                     X2"
                     /calculated_mol_wt=78949
     Region          142..216
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..706
                     /gene="LOC107932153"
                     /coded_by="XM_041088188.1:93..2213"
                     /db_xref="GeneID:107932153"
ORIGIN      
        1 meqpasspnt tlrgsprskd pqmdvhlpvt eadpssssvw dwgdlldftl ddhfsisldd
       61 gnmypppfea spsvpdpepv sgpdrvrkrd prmtcsnflt grvpcacpei deqmekleee
      121 eagapgkkra rtgrvgsgts rcqipgcevd itelkgyhrr hrvclqcans stvlingesk
      181 rycqqcgkfh llsdfdegkr scrrklerhn nrrrrkpvgs ktevnkeslg avqsediacd
      241 geagkddlsl sgqtaedppf esedglvsad csapmlqtvn ndstvalidt gtdggkedlk
      301 fsistsyhdn rtayssmcpt grisfklydw npaefprrlr hqifqwladm pvelegyirp
      361 gctiltvfis mpknmwmkls enpmtymhdf vftpgrmlhg rglmtihlnn mifrtskggs
      421 slvkldmgvq aprlhyvhps cfeagkpmef vacgsnllqp klqflvsfag rylpydycla
      481 sahvnategs sscdhllyki yvpqtesdlf gpvfievenq sglsnfipvl igdkdvcsem
      541 kviqqgfdas lfwggsqisa nrsscetstl rqkayselvl diawllrepk senfqetmas
      601 sqiqrfncll nfliqnkstv ilkkvlqnlk nvmeeagfng tddpdtrllk kymdygrdil
      661 nnklqegerp vllseyieqe gkwnsqsslk ndglfvpngs qypvpq
//
LOCUS       XP_016719550              73 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719550
VERSION     XP_016719550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..73
                     /product="uncharacterized protein"
                     /calculated_mol_wt=8276
     CDS             1..73
                     /gene="LOC107932112"
                     /coded_by="XM_016864061.2:239..460"
                     /db_xref="GeneID:107932112"
ORIGIN      
        1 maikfldwyl kiaigsaiig gsmelfmikt gfydkvtvle sekrawensp eaqamrealn
       61 pwrnhdaqer kss
//
LOCUS       XP_016719551              73 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719551
VERSION     XP_016719551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864062.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..73
                     /product="uncharacterized protein"
                     /calculated_mol_wt=8276
     CDS             1..73
                     /gene="LOC107932112"
                     /coded_by="XM_016864062.2:221..442"
                     /db_xref="GeneID:107932112"
ORIGIN      
        1 maikfldwyl kiaigsaiig gsmelfmikt gfydkvtvle sekrawensp eaqamrealn
       61 pwrnhdaqer kss
//
LOCUS       XP_016719598            1134 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719598
VERSION     XP_016719598.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719598.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1134
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=125120
     Region          910..975
                     /region_name="BRCT_MDC1_rpt1"
                     /note="first BRCT domain of mediator of DNA damage
                     checkpoint protein 1 (MDC1) and similar proteins; cd17744"
                     /db_xref="CDD:349375"
     Site            order(915..916,953..955,957)
                     /site_type="other"
                     /note="histone H2AX interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:349375"
     Region          1016..1102
                     /region_name="BRCT_PAXIP1_rpt6_like"
                     /note="sixth BRCT domain of PAX-interacting protein 1
                     (PAXIP1), second BRCT domain of mediator of DNA damage
                     checkpoint protein 1 (MDC1) and similar proteins; cd18432"
                     /db_xref="CDD:349385"
     Site            order(1029,1070..1071,1093)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349385"
     Site            order(1030,1093)
                     /site_type="other"
                     /note="gamma-H2AX interaction site [polypeptide binding]"
                     /db_xref="CDD:349385"
     CDS             1..1134
                     /gene="LOC107932160"
                     /coded_by="XM_016864109.2:313..3717"
                     /db_xref="GeneID:107932160"
ORIGIN      
        1 mgsigdtkge fkpsdinpst dfadgetqpf efdsqfpvsp fcgyrddned ddelnypqdt
       61 vplydnnvav edgletqiln lgeetqvldf ggetqvldyl dccenietql ldafdvsvvl
      121 dsegegtdgt evfddgdevs ddevvigdcg rsigheekes leqcrastde crssgihvpt
      181 atpdvkavse gkpgsvqrft svraaslras glaarnaalr emnnescsnq tdsrfsnqct
      241 vdskglnlkv venisqrqdq nsinfrvgcp tarklfaedc ftenkelsrn sevadaredl
      301 leapdcdgpl aglsyidsqe pgelsqanal dfverfvndk lmeldnevdf gkstggnskl
      361 iscakglqsl akrtiersta geagnfewdd fredegggdi yrrmkeefyg nrsqarksst
      421 nlrkpkgkkl nescnvdqpk sgdkrmvhse sklllcklkd ndmtlqegqm nfrknlsnef
      481 deqfnsdssr gqleptgakt gaaeelndvg fdtqiaaeai ealfngeaat epkanqgvqs
      541 iskgsskasf rgkegkriss tsrkgcsdat rftrqskrsk lnedssvlle rhsknvgkes
      601 svttpvsdck kgrkrikevd flqesrigst dvklsgmsna ngqlsilhsd qsgehgngng
      661 nvklsidvhl elisksignh vpsyprkrrs srkmpvglge sdkmeaqsrk paqpddngkp
      721 tamqkrsrgn nrstcipsst rrtarssvnt cplpyfsdqn segklsrqsl dkqgsdadel
      781 ncnfsdkngr miskrkigpk aakaithagg npdaislsna enltvnvdsd kspkeksrsp
      841 gslcttptnh lipinaaspv cmgeeyykqs ckknllkasl ikelrslcpn eaepisplkd
      901 mrkrrnladv rvlfsnhlde dilkqqkkil arlgiheast ildathfitd kfvrtrnmle
      961 aiasgksvvs hlwlesigqv nihideeayi lrdikkekel gfcmpvslar arkrpllqgr
     1021 rvlitpktkp gketisrlvt avhgqaiert gkssmkddki pddllvlsce edyeicvpfl
     1081 ekgaavysse lllngivtqk ldyqrhrlfe dhvrrtrsti wmkkdnkfhp vtka
//
LOCUS       XP_040944123            1132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944123
VERSION     XP_040944123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088189.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1132
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=124992
     Region          910..975
                     /region_name="BRCT_MDC1_rpt1"
                     /note="first BRCT domain of mediator of DNA damage
                     checkpoint protein 1 (MDC1) and similar proteins; cd17744"
                     /db_xref="CDD:349375"
     Site            order(915..916,953..955,957)
                     /site_type="other"
                     /note="histone H2AX interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:349375"
     Region          1016..1100
                     /region_name="BRCT_PAXIP1_rpt6_like"
                     /note="sixth BRCT domain of PAX-interacting protein 1
                     (PAXIP1), second BRCT domain of mediator of DNA damage
                     checkpoint protein 1 (MDC1) and similar proteins; cd18432"
                     /db_xref="CDD:349385"
     Site            order(1029,1070..1071,1091)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349385"
     Site            order(1030,1091)
                     /site_type="other"
                     /note="gamma-H2AX interaction site [polypeptide binding]"
                     /db_xref="CDD:349385"
     CDS             1..1132
                     /gene="LOC107932160"
                     /coded_by="XM_041088189.1:224..3622"
                     /db_xref="GeneID:107932160"
ORIGIN      
        1 mgsigdtkge fkpsdinpst dfadgetqpf efdsqfpvsp fcgyrddned ddelnypqdt
       61 vplydnnvav edgletqiln lgeetqvldf ggetqvldyl dccenietql ldafdvsvvl
      121 dsegegtdgt evfddgdevs ddevvigdcg rsigheekes leqcrastde crssgihvpt
      181 atpdvkavse gkpgsvqrft svraaslras glaarnaalr emnnescsnq tdsrfsnqct
      241 vdskglnlkv venisqrqdq nsinfrvgcp tarklfaedc ftenkelsrn sevadaredl
      301 leapdcdgpl aglsyidsqe pgelsqanal dfverfvndk lmeldnevdf gkstggnskl
      361 iscakglqsl akrtiersta geagnfewdd fredegggdi yrrmkeefyg nrsqarksst
      421 nlrkpkgkkl nescnvdqpk sgdkrmvhse sklllcklkd ndmtlqegqm nfrknlsnef
      481 deqfnsdssr gqleptgakt gaaeelndvg fdtqiaaeai ealfngeaat epkanqgvqs
      541 iskgsskasf rgkegkriss tsrkgcsdat rftrqskrsk lnedssvlle rhsknvgkes
      601 svttpvsdck kgrkrikevd flqesrigst dvklsgmsna ngqlsilhsd qsgehgngng
      661 nvklsidvhl elisksignh vpsyprkrrs srkmpvglge sdkmeaqsrk paqpddngkp
      721 tamqkrsrgn nrstcipsst rrtarssvnt cplpyfsdqn segklsrqsl dkqgsdadel
      781 ncnfsdkngr miskrkigpk aakaithagg npdaislsna enltvnvdsd kspkeksrsp
      841 gslcttptnh lipinaaspv cmgeeyykqs ckknllkasl ikelrslcpn eaepisplkd
      901 mrkrrnladv rvlfsnhlde dilkqqkkil arlgiheast ildathfitd kfvrtrnmle
      961 aiasgksvvs hlwlesigqv nihideeayi lrdikkekel gfcmpvslar arkrpllqgr
     1021 rvlitpktkp gketisrlvt avhgqaiert gkssmkddki pddllvlsce edyeicvpfl
     1081 ekavyssell lngivtqkld yqrhrlfedh vrrtrstiwm kkdnkfhpvt ka
//
LOCUS       XP_016719599            1055 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719599
VERSION     XP_016719599.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719599.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1055
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=115880
     Region          910..975
                     /region_name="BRCT_MDC1_rpt1"
                     /note="first BRCT domain of mediator of DNA damage
                     checkpoint protein 1 (MDC1) and similar proteins; cd17744"
                     /db_xref="CDD:349375"
     Site            order(915..916,953..955,957)
                     /site_type="other"
                     /note="histone H2AX interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:349375"
     Region          997..>1044
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:469589"
     CDS             1..1055
                     /gene="LOC107932160"
                     /coded_by="XM_016864110.2:224..3391"
                     /db_xref="GeneID:107932160"
ORIGIN      
        1 mgsigdtkge fkpsdinpst dfadgetqpf efdsqfpvsp fcgyrddned ddelnypqdt
       61 vplydnnvav edgletqiln lgeetqvldf ggetqvldyl dccenietql ldafdvsvvl
      121 dsegegtdgt evfddgdevs ddevvigdcg rsigheekes leqcrastde crssgihvpt
      181 atpdvkavse gkpgsvqrft svraaslras glaarnaalr emnnescsnq tdsrfsnqct
      241 vdskglnlkv venisqrqdq nsinfrvgcp tarklfaedc ftenkelsrn sevadaredl
      301 leapdcdgpl aglsyidsqe pgelsqanal dfverfvndk lmeldnevdf gkstggnskl
      361 iscakglqsl akrtiersta geagnfewdd fredegggdi yrrmkeefyg nrsqarksst
      421 nlrkpkgkkl nescnvdqpk sgdkrmvhse sklllcklkd ndmtlqegqm nfrknlsnef
      481 deqfnsdssr gqleptgakt gaaeelndvg fdtqiaaeai ealfngeaat epkanqgvqs
      541 iskgsskasf rgkegkriss tsrkgcsdat rftrqskrsk lnedssvlle rhsknvgkes
      601 svttpvsdck kgrkrikevd flqesrigst dvklsgmsna ngqlsilhsd qsgehgngng
      661 nvklsidvhl elisksignh vpsyprkrrs srkmpvglge sdkmeaqsrk paqpddngkp
      721 tamqkrsrgn nrstcipsst rrtarssvnt cplpyfsdqn segklsrqsl dkqgsdadel
      781 ncnfsdkngr miskrkigpk aakaithagg npdaislsna enltvnvdsd kspkeksrsp
      841 gslcttptnh lipinaaspv cmgeeyykqs ckknllkasl ikelrslcpn eaepisplkd
      901 mrkrrnladv rvlfsnhlde dilkqqkkil arlgiheast ildathfitd kfvrtrnmle
      961 aiasgksvvs hlwlesigqv nihideeayi lrdikkekel gfcmpvslar arkrpllqgr
     1021 rvlitpktkp gketisrlvt avhgqgqpft vqscy
//
LOCUS       XP_016719585             932 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016719585
VERSION     XP_016719585.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864096.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719585.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..932
                     /product="uncharacterized protein"
                     /calculated_mol_wt=105541
     Region          67..128
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(95..97,105,108..109,112..113)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          441..644
                     /region_name="DUF3444"
                     /note="Domain of unknown function (DUF3444); pfam11926"
                     /db_xref="CDD:463398"
     Region          704..909
                     /region_name="DUF3444"
                     /note="Domain of unknown function (DUF3444); pfam11926"
                     /db_xref="CDD:463398"
     CDS             1..932
                     /gene="LOC107932146"
                     /coded_by="XM_016864096.2:352..3150"
                     /db_xref="GeneID:107932146"
ORIGIN      
        1 mecnkeealr akgiaekkmq nqdfsgalkv aikaqqlfqe lenisqmimv cdvhcaaekp
       61 lfgnekdwya ilkveptade atikkqyrkf alqlhpdknk fpgaeaafkl igdaqrtlld
      121 qgkrsahdmk rrvtvnrpaa aaacrppqnp swhpypaaqn nfhtnfsgmn sqqqrqptqa
      181 gvsngqrtfw tkcpyctvry qyytevlnrs lrcqachknf vaydsgavpq asnvtqsnlp
      241 rqgvahnqna srvdpgtqrk fnsesvftsf tpkaagtsda rtekvngkrg rkqtvesses
      301 cdsesslese edevidgnge vlskkkfdsq geqnvrrser rkqhvsyken lsddedtvnp
      361 pkrakgselp seteetgned eaknhkvgkr feasqsngkk esgkgddlkk treasadgvk
      421 gnsnptiddp vsdtscketk esevfaypdp efndfdkekk egcfavgqiw alydtqdamp
      481 rfyarirkvf ysgfkvritw lepdpddena vrwvseglpv scgrfkhgep esiedrlmfs
      541 hliswekgpy rdtykiyprk gevwalfknw nvnwksrtek hgyefveils engegvgihv
      601 ayltkvkgfv svfcpmskdg vntilippne llrfshkvps fvltskerkg vpkgsfeldp
      661 aslpeevfvp kglkeegdgr dpsvsemedp magsndpdps tsapksfeip esefydfdad
      721 kteekfrvgq iwalygdedg lpkyygemkk vesspvfkvh vrwlfscple tttqwqdsdm
      781 ptccgrfgir rgsqtytstd sfshllkaep tdtkgkynii prkgevwgly rnwtpnikcs
      841 dlenweydiv qvleetyfli kvvvldrveg fnsvfkprvk ggsnvtieip rvdqirfshq
      901 ipyfqlther kgslrgclel dpaalpphyf sf
//
LOCUS       XP_016719595            1368 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase RUNKEL isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016719595
VERSION     XP_016719595.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719595.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1368
                     /product="serine/threonine-protein kinase RUNKEL isoform
                     X1"
                     /calculated_mol_wt=152435
     Region          4..257
                     /region_name="STKc_ULK4"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Unc-51-like kinase 4; cd14010"
                     /db_xref="CDD:270912"
     Site            order(10..14,18,31,33,59,75..78,82,84,121,123,125..126,
                     128,139,142,163..166)
                     /site_type="active"
                     /db_xref="CDD:270912"
     Site            order(10..14,18,31,33,59,75..78,82,121,123,125..126,128,
                     139)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270912"
     Site            order(14,82,84,121,123,125,142,163..166)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270912"
     Site            order(138..152,160..166)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270912"
     CDS             1..1368
                     /gene="LOC107932155"
                     /coded_by="XM_016864106.2:143..4249"
                     /db_xref="GeneID:107932155"
ORIGIN      
        1 mnhyhiyeai grgkyssvyk grkkktieyf aiksveksqr skvlqevril hslndpnilk
       61 fhswyetsah lwlvlefctg gdlmtllrqd gklpedsihf laydlvkalq ylhskgiiyc
      121 dlkpsnilld enghtklcdf alarklsdis ktpssmlpqa krgtpcymap elfedggvhs
      181 yasdfwalgc vlyecyagkp pfvgreftql vksilsdppp plegspspsf vnivnsllik
      241 dpaerikwpe lcvhafwrnk fsqvslppqp afenmiglya kpclserngd rssqsktppk
      301 yrekdpkgas rkdenslvgs rghetpvkgt pvgrktqpka sgrgaeekhk dhssaikrvn
      361 llrlsriakt nlqkeneken yrrpvpnsse nesevkient dmeldfdent eeevhdesdg
      421 sdvptcttee kissqnqeqf kveegdnnvd radsqagsnl pasdesktcd qesssdhvev
      481 aatppsvssq hrnqrikesp gatlesewsk tsnsiskvlw htsdlsvrpv mpsrksdkms
      541 ealpslpfea lhpsdfvrms kekldalnnr iisifgsagt gekqnviryl emlsnnaeaa
      601 niltngpiml mlvkmlrlsk tsafrvqlas ligllirhst fieddlsnsg ilialsdglr
      661 dyqekvrrfs maalgellfy istqneqakd nnplespskn nkpvsgwqvp nslvslvssv
      721 lrkgeddmtq lyavrtieni csqggywasr ftsqdvisnl cyiyravgkq esmrltagsc
      781 lvrlvrfnph itqsvidkls lkdiasalnk gspreqqicl nllnmvllgs hlfsnigryl
      841 qplvedknlv pslvslieqg tetlrgkall svallckngk rwllqffcna rllhivdrla
      901 kekdnylqqc ldsflyevas tvpglldsit gdiqqmmggr rhgqnsalts raaaknnvnl
      961 fpvvlhlles ssfksrlvth qilrqlanli qvvetpfqgr ddfqitllrv lesileespv
     1021 ilespniftq gilpslavly kgnkdgnarf lclkimfdvm viflnepslk dqssedlrli
     1081 snshflplyp tliededpip myaqkllvml iefdyikipd ildpkmvskc fgfllgdltn
     1141 anvnnvklcl alasapemdp kllsqlkvvr kignllelvy akdmedflep tlglfkafll
     1201 rssgngfvyt keptqlldgs fessgsvnqq qcirdimdfg snvgvlldls ashepniadv
     1261 asecvvlllk aapreattgf ltnlskagsi leswrskgis hlllnrllqa vgyscrqyls
     1321 hamilsisaa eitriqgivs elksssipgl anvasvvfse lqrlprri
//
LOCUS       XP_040944124            1285 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase RUNKEL isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944124
VERSION     XP_040944124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088190.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1285
                     /product="serine/threonine-protein kinase RUNKEL isoform
                     X2"
                     /calculated_mol_wt=142665
     Region          <1..174
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          168..>431
                     /region_name="Granin"
                     /note="Granin (chromogranin or secretogranin); pfam01271"
                     /db_xref="CDD:279595"
     CDS             1..1285
                     /gene="LOC107932155"
                     /coded_by="XM_041088190.1:369..4226"
                     /db_xref="GeneID:107932155"
ORIGIN      
        1 mtllrqdgkl pedsihflay dlvkalqylh skgiiycdlk psnilldeng htklcdfala
       61 rklsdisktp ssmlpqakrg tpcymapelf edggvhsyas dfwalgcvly ecyagkppfv
      121 greftqlvks ilsdpppple gspspsfvni vnsllikdpa erikwpelcv hafwrnkfsq
      181 vslppqpafe nmiglyakpc lserngdrss qsktppkyre kdpkgasrkd enslvgsrgh
      241 etpvkgtpvg rktqpkasgr gaeekhkdhs saikrvnllr lsriaktnlq kenekenyrr
      301 pvpnssenes evkientdme ldfdenteee vhdesdgsdv ptctteekis sqnqeqfkve
      361 egdnnvdrad sqagsnlpas desktcdqes ssdhvevaat ppsvssqhrn qrikespgat
      421 lesewsktsn siskvlwhts dlsvrpvmps rksdkmseal pslpfealhp sdfvrmskek
      481 ldalnnriis ifgsagtgek qnviryleml snnaeaanil tngpimlmlv kmlrlsktsa
      541 frvqlaslig llirhstfie ddlsnsgili alsdglrdyq ekvrrfsmaa lgellfyist
      601 qneqakdnnp lespsknnkp vsgwqvpnsl vslvssvlrk geddmtqlya vrtienicsq
      661 ggywasrfts qdvisnlcyi yravgkqesm rltagsclvr lvrfnphitq svidklslkd
      721 iasalnkgsp reqqiclnll nmvllgshlf snigrylqpl vedknlvpsl vslieqgtet
      781 lrgkallsva llckngkrwl lqffcnarll hivdrlakek dnylqqclds flyevastvp
      841 glldsitgdi qqmmggrrhg qnsaltsraa aknnvnlfpv vlhllesssf ksrlvthqil
      901 rqlanliqvv etpfqgrddf qitllrvles ileespvile spniftqgil pslavlykgn
      961 kdgnarflcl kimfdvmvif lnepslkdqs sedlrlisns hflplyptli ededpipmya
     1021 qkllvmlief dyikipdild pkmvskcfgf llgdltnanv nnvklclala sapemdpkll
     1081 sqlkvvrkig nllelvyakd medfleptlg lfkafllrss gngfvytkep tqlldgsfes
     1141 sgsvnqqqci rdimdfgsnv gvlldlsash epniadvase cvvlllkaap reattgfltn
     1201 lskagsiles wrskgishll lnrllqavgy scrqylsham ilsisaaeit riqgivselk
     1261 sssipglanv asvvfselqr lprri
//
LOCUS       XP_016719603             535 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 2 [Gossypium hirsutum].
ACCESSION   XP_016719603
VERSION     XP_016719603.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864114.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="sodium/hydrogen exchanger 2"
                     /calculated_mol_wt=59048
     Region          40..>439
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..535
                     /gene="LOC107932164"
                     /coded_by="XM_016864114.2:697..2304"
                     /db_xref="GeneID:107932164"
ORIGIN      
        1 maigilnsll asdhssivsm nlfvallcgc ivighllees rwmnesital vigvctgvvi
       61 llttggkssh llvfsedlff iyllppiifn agfqvkkkqf frnfmtimlf gavgtlisfg
      121 iisagaiqff kelhigdlqi gdylaigaif satdsvctlq vlnqdetpll yslvfgegvv
      181 ndatsvvlfn aiqsfdlnhi nstialkfvg nffylfisst llgvvtglls afiikklyfg
      241 rhstdreval milmaylsym laelfylsgi ltvffcgivm shytwhnvte ssrvttkhaf
      301 atlsfvaeif iflyvgmdal diekwrvisd spgksvgvss illglilvgr aafvfplsfi
      361 snltkkaphe kiefkqqvti wwaglmrgav smalaynqft slghtqvrgn ammitstitv
      421 vlfstvvfgl mtkplvrill pspkhlsrml ssepttpksf flpllnngqe seaeqgnrsv
      481 irpsslrmll ttpshtvhyy wrkfddafmr pvfggrgfvp fvpgspteqn gpqwq
//
LOCUS       XP_016719604             535 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 2 [Gossypium hirsutum].
ACCESSION   XP_016719604
VERSION     XP_016719604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864115.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="sodium/hydrogen exchanger 2"
                     /calculated_mol_wt=59048
     Region          40..>439
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..535
                     /gene="LOC107932164"
                     /coded_by="XM_016864115.2:568..2175"
                     /db_xref="GeneID:107932164"
ORIGIN      
        1 maigilnsll asdhssivsm nlfvallcgc ivighllees rwmnesital vigvctgvvi
       61 llttggkssh llvfsedlff iyllppiifn agfqvkkkqf frnfmtimlf gavgtlisfg
      121 iisagaiqff kelhigdlqi gdylaigaif satdsvctlq vlnqdetpll yslvfgegvv
      181 ndatsvvlfn aiqsfdlnhi nstialkfvg nffylfisst llgvvtglls afiikklyfg
      241 rhstdreval milmaylsym laelfylsgi ltvffcgivm shytwhnvte ssrvttkhaf
      301 atlsfvaeif iflyvgmdal diekwrvisd spgksvgvss illglilvgr aafvfplsfi
      361 snltkkaphe kiefkqqvti wwaglmrgav smalaynqft slghtqvrgn ammitstitv
      421 vlfstvvfgl mtkplvrill pspkhlsrml ssepttpksf flpllnngqe seaeqgnrsv
      481 irpsslrmll ttpshtvhyy wrkfddafmr pvfggrgfvp fvpgspteqn gpqwq
//
LOCUS       XP_016719605             535 aa            linear   PLN 06-AUG-2024
DEFINITION  sodium/hydrogen exchanger 2 [Gossypium hirsutum].
ACCESSION   XP_016719605
VERSION     XP_016719605.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864116.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="sodium/hydrogen exchanger 2"
                     /calculated_mol_wt=59048
     Region          40..>439
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..535
                     /gene="LOC107932164"
                     /coded_by="XM_016864116.2:414..2021"
                     /db_xref="GeneID:107932164"
ORIGIN      
        1 maigilnsll asdhssivsm nlfvallcgc ivighllees rwmnesital vigvctgvvi
       61 llttggkssh llvfsedlff iyllppiifn agfqvkkkqf frnfmtimlf gavgtlisfg
      121 iisagaiqff kelhigdlqi gdylaigaif satdsvctlq vlnqdetpll yslvfgegvv
      181 ndatsvvlfn aiqsfdlnhi nstialkfvg nffylfisst llgvvtglls afiikklyfg
      241 rhstdreval milmaylsym laelfylsgi ltvffcgivm shytwhnvte ssrvttkhaf
      301 atlsfvaeif iflyvgmdal diekwrvisd spgksvgvss illglilvgr aafvfplsfi
      361 snltkkaphe kiefkqqvti wwaglmrgav smalaynqft slghtqvrgn ammitstitv
      421 vlfstvvfgl mtkplvrill pspkhlsrml ssepttpksf flpllnngqe seaeqgnrsv
      481 irpsslrmll ttpshtvhyy wrkfddafmr pvfggrgfvp fvpgspteqn gpqwq
//
LOCUS       XP_016719534             535 aa            linear   PLN 06-AUG-2024
DEFINITION  inactive beta-amylase 9 [Gossypium hirsutum].
ACCESSION   XP_016719534
VERSION     XP_016719534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864045.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="inactive beta-amylase 9"
                     /calculated_mol_wt=58649
     Region          85..501
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     CDS             1..535
                     /gene="LOC107932100"
                     /coded_by="XM_016864045.2:389..1996"
                     /db_xref="GeneID:107932100"
ORIGIN      
        1 mevsvirscs qatnpktelg fsdsrfsfgk fneklfsrkp nsvsfesplr rgksglrita
       61 qaaqsdrlpk sksstksktl nrirlfaglp ldvvsggtvn qfraisaglk alkllglegv
      121 elpiwwgvve hesmgkynws gyltiaemvr kaglklnvtl cfhassqpki plpewvldig
      181 ktksniffkd ragkpyrgcl slavdelavl ngktpmevyq dfcesfksaf safigstitg
      241 itmglgpdge lrypshrgfa ksgtvpgage fqcydknmlh llkqhaeacg kpkwglggph
      301 napayselpt antffkdhgg swespygdff lswyssqlia hgdrllslas svfsdsavni
      361 fgkvplmhsw hgtrshpsel tagfyntatr kgykevaemf arnsckiilp gmdqsdkyql
      421 keslsspell laeigtacnk hgvrisgqns tvgapdglkq ikknmlsenl ndsfifqrig
      481 aqffapehfp lfiefvrkln qpephsgnlp tkegtttatd svhtrsnlsi hmqsa
//
LOCUS       XP_016719536             385 aa            linear   PLN 06-AUG-2024
DEFINITION  tubby-like F-box protein 3 [Gossypium hirsutum].
ACCESSION   XP_016719536
VERSION     XP_016719536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="tubby-like F-box protein 3"
                     /calculated_mol_wt=42893
     Region          40..84
                     /region_name="F-box_AtTLP-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     TUBBY-like proteins (AtTLPs) and similar proteins;
                     cd22153"
                     /db_xref="CDD:438924"
     Site            order(43,47,50..51,54..55,67,69..70,74..76,78)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438924"
     Region          102..380
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..385
                     /gene="LOC107932101"
                     /coded_by="XM_016864047.2:218..1375"
                     /db_xref="GeneID:107932101"
ORIGIN      
        1 mtlefiarlr srrvvvqdql evpdqaavdg cgddgedccw aklppellre vllriedset
       61 hwpqrktvva cagvcsswrl ivkeivkfpe isgkltfpis vkqpgpkdgl lhcfikrnrs
      121 thtyclylsl tnaltddgkf llaarkhkrp thndyiislr aedmsrgsss yvgklrsnyl
      181 gnrytilagq sahtgskmak nhsprlpnlk hasskihlvn ysmahisyel evlgsrgprr
      241 mqcimgtipt asilpeepar arsefsgrnt difqsnpiah sepasmgnfl sgslcgqkng
      301 alvlinkapr wneqlhcwcl nfhgrvtvas vknfqlvasp enrkivlqfg kvgkdlftmd
      361 yqypisafqa faiclssfdt kvace
//
LOCUS       XP_016719549             204 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 1D1 [Gossypium hirsutum].
ACCESSION   XP_016719549
VERSION     XP_016719549.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719549.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="CASP-like protein 1D1"
                     /calculated_mol_wt=21656
     Region          39..198
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; cl04571"
                     /db_xref="CDD:383772"
     CDS             1..204
                     /gene="LOC107932110"
                     /coded_by="XM_016864060.2:388..1002"
                     /db_xref="GeneID:107932110"
ORIGIN      
        1 mastdktavp lsspkseatp psavaaaaks pfnysfvdvv lrvllfaatl tsvvvmatsk
       61 etemvpvpgf pliriqlqak fnhspalvyf iaalsvtgfy siitalasls ivlnptyskt
      121 fllffaffdv vfvgivasat gaagavgyig lkgnthvgwt kicnvydkfc rytasslals
      181 lfaaillvll smistftlyk kird
//
LOCUS       XP_016719564             174 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 1E1 [Gossypium hirsutum].
ACCESSION   XP_016719564
VERSION     XP_016719564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..174
                     /product="CASP-like protein 1E1"
                     /calculated_mol_wt=18423
     Region          7..166
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; cl04571"
                     /db_xref="CDD:383772"
     CDS             1..174
                     /gene="LOC107932122"
                     /coded_by="XM_016864075.2:372..896"
                     /db_xref="GeneID:107932122"
ORIGIN      
        1 mssicelilr fmallltlaa aiiigvnkqt kffpvqltpa fppvevaara kwhylsalvy
       61 slvanitass yaaistlivl atrngeagfa qvitifdaai vgllfsanga alavgiigyk
      121 gnshlqwnkv cnvfdsfcdr vaisivlslv asfafialva lavlslqkrf atrt
//
LOCUS       XP_016719537             270 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase MIEL1 [Gossypium hirsutum].
ACCESSION   XP_016719537
VERSION     XP_016719537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..270
                     /product="E3 ubiquitin-protein ligase MIEL1"
                     /calculated_mol_wt=31351
     Region          21..102
                     /region_name="zf-CHY"
                     /note="CHY zinc finger; pfam05495"
                     /db_xref="CDD:461665"
     Region          155..199
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(156,159,175,177,180,183,195,198)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          203..261
                     /region_name="zinc_ribbon_6"
                     /note="Zinc-ribbon; pfam14599"
                     /db_xref="CDD:464215"
     CDS             1..270
                     /gene="LOC107932102"
                     /coded_by="XM_016864048.2:288..1100"
                     /db_xref="GeneID:107932102"
ORIGIN      
        1 memeassanq rlhfgkmgyg cqhyrrrcki rapccnevfs crhchneavn llsnpfdrhe
       61 lvrkdvkqvi csvcdteqpv aqlcsncgvn mgeyfckicn ffdddtekgq fhcddcgicr
      121 vggrenffhc kkcgscysva lrgnhtcven smqhhcpicy eylfdslkdt tvmkcghtmh
      181 yecyhemlkr dkyccpicsk svidmsrawk rmdeeieatl mpedyrykkv wilcndcddt
      241 tevyfhiigq kcshcrsynt rtiappelpq
//
LOCUS       XP_016719614             350 aa            linear   PLN 06-AUG-2024
DEFINITION  lipase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016719614
VERSION     XP_016719614.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719614.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="lipase isoform X1"
                     /calculated_mol_wt=39463
     Region          36..256
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(106,109,111..119)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            172..176
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..350
                     /gene="LOC107932171"
                     /coded_by="XM_016864125.2:433..1485"
                     /db_xref="GeneID:107932171"
ORIGIN      
        1 meqkawlifv iftcliassc grelkvdhkh klpvynhtla tilveyasav yisdltelft
       61 wtcercnglt kgfevielvv dienclqafv gvakdlnavv iafrgtqehs iqnwvedlfw
      121 kqldlnypgm pdamvhhgfy tayhnttirh gilhavkeak efygdlgimv tghsmggama
      181 sfcaldlvvn heaksvqvmt fgqprignaa fasfyaklvp ntirvtndhd ivphlppyyy
      241 yfpqktyhhf premwlyslg lgslvyrvek vcdgsgedpt csrsvtgnsi mdhlnyygvd
      301 lmcqewrscr ivmdprvaey gktdhkgnfi lsrapamrvr snegevkasa
//
LOCUS       XP_040944125             257 aa            linear   PLN 06-AUG-2024
DEFINITION  lipase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944125
VERSION     XP_040944125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088191.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..257
                     /product="lipase isoform X2"
                     /calculated_mol_wt=29042
     Region          36..254
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(106,109,111..119)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            172..176
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..257
                     /gene="LOC107932171"
                     /coded_by="XM_041088191.1:357..1130"
                     /db_xref="GeneID:107932171"
ORIGIN      
        1 meqkawlifv iftcliassc grelkvdhkh klpvynhtla tilveyasav yisdltelft
       61 wtcercnglt kgfevielvv dienclqafv gvakdlnavv iafrgtqehs iqnwvedlfw
      121 kqldlnypgm pdamvhhgfy tayhnttirh gilhavkeak efygdlgimv tghsmggama
      181 sfcaldlvvn heaksvqvmt fgqprignaa fasfyaklvp ntirvtndhd ivphlppyyy
      241 yfpqktyhhf prevgdr
//
LOCUS       XP_040944126            1063 aa            linear   PLN 06-AUG-2024
DEFINITION  ISWI chromatin-remodeling complex ATPase CHR11 [Gossypium
            hirsutum].
ACCESSION   XP_040944126
VERSION     XP_040944126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088192.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1063
                     /product="ISWI chromatin-remodeling complex ATPase CHR11"
                     /calculated_mol_wt=123309
     Region          72..1048
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     CDS             1..1063
                     /gene="LOC121214480"
                     /coded_by="XM_041088192.1:135..3326"
                     /db_xref="GeneID:121214480"
ORIGIN      
        1 maksskpass deelyngsss seeermnaqv ngeeddeeei eavarsadas dedddavpee
       61 iaddadddes ngadpeiskr ekerlkemqk ikkqkiqeil dtqnaaidad mnnkgkgrlk
      121 yllqqtelfs hfakgdpnss qkkvkgrgrh askiteeeed eeylkeeedg lsgntrlvtq
      181 psciqgkmrd yqlaglnwli rlyengingi lademglgkt lqtisllgyl heyrgitgph
      241 mvvapkstlg nwmneirrfc svlravkflg npeerryire ellvagkfdv cvtsfemaik
      301 eksalrrfsw ryiiideahr iknensllsk tmrlyntnyr llitgtplqn nlhelwslln
      361 fllpeifssa etfdewfqis gendqqevvq qlhkvlrpfl lrrlksdvek glppkketil
      421 kvgmsqmqkq yyrallqkdl evvnaggerk rllniamqlr kccnhpylfq gaepgppytt
      481 gdhlvtsagk mvlldkllpk lkerdsrvli fsqmtrlldi ledylmfrgy qycridgntg
      541 gedrdasiea fnkpgsekfv fllstraggl ginlatadvv ilydsdwnpq vdlqaqdrah
      601 rigqkkevqv frfcteytie ekvieraykk laldalviqq grlaeqktvn kdellqmvrf
      661 gaemvfsskd stitdedidr iiakgeaata eldakmkkft edaikfkmdd taelyefddd
      721 kdenkfdikk ivsenwiepp krerkrnyse seyfkqtlrq ggpakpkepr iprmpqlldf
      781 qffntqrlse lyekevrylm qthqksqvkd tidvdepeet gdpltaeele ekerlleegf
      841 sswsrrdfnt firacekygr ndimsiasem egkteeever yakvfkeryk elndydriik
      901 niergearis rrdeimkaig kkldryknpw lelkiqygqn kgklyneecd rfmicmvhkl
      961 gygnweelka afrasplfrf dwfvksrttq elarrcdtli rlvekenqey dererqarke
     1021 kklaknmtps krsgkqptes pnqlkkrkql smddnansgk rrk
//
LOCUS       XP_040944127             102 aa            linear   PLN 06-AUG-2024
DEFINITION  monothiol glutaredoxin-S10 [Gossypium hirsutum].
ACCESSION   XP_040944127
VERSION     XP_040944127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088193.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..102
                     /product="monothiol glutaredoxin-S10"
                     /calculated_mol_wt=11001
     Region          4..102
                     /region_name="GlrX-like_plant"
                     /note="Glutaredoxin-like family; TIGR02189"
                     /db_xref="CDD:274023"
     Site            order(18,21,23,63..66,77..80)
                     /site_type="other"
                     /note="GSH binding site [chemical binding]"
                     /db_xref="CDD:239511"
     Site            order(21,24)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239511"
     CDS             1..102
                     /gene="LOC121214481"
                     /coded_by="XM_041088193.1:99..407"
                     /db_xref="GeneID:121214481"
ORIGIN      
        1 mdrvaklasq kavvifskss ccmchaikrl fyeqgvspai yeldedargk emewaltrlg
       61 ckppvpavfi ggkfvgsant iltlqlngsl mnllknagai wl
//
LOCUS       XP_040944128             102 aa            linear   PLN 06-AUG-2024
DEFINITION  monothiol glutaredoxin-S2 [Gossypium hirsutum].
ACCESSION   XP_040944128
VERSION     XP_040944128.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088194.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..102
                     /product="monothiol glutaredoxin-S2"
                     /calculated_mol_wt=11224
     Region          4..101
                     /region_name="GlrX-like_plant"
                     /note="Glutaredoxin-like family; TIGR02189"
                     /db_xref="CDD:274023"
     Site            order(18,21,23,63..66,77..80)
                     /site_type="other"
                     /note="GSH binding site [chemical binding]"
                     /db_xref="CDD:239511"
     Site            order(21,24)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239511"
     CDS             1..102
                     /gene="LOC121214482"
                     /coded_by="XM_041088194.1:136..444"
                     /db_xref="GeneID:121214482"
ORIGIN      
        1 mekvtklase rpvvifskss ccmchtiktl fyefgvnpav yeldeiprgr eleqallrlg
       61 cspsvpvvyi ggefvggvne vmslhlnrsl ipmlrragal wv
//
LOCUS       XP_016728502             317 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF086 [Gossypium
            hirsutum].
ACCESSION   XP_016728502
VERSION     XP_016728502.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873013.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728502.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..317
                     /product="ethylene-responsive transcription factor ERF086"
                     /calculated_mol_wt=35183
     Region          49..111
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(51..52,54,56,58,60,64,66,73,75,78)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..317
                     /gene="LOC107939652"
                     /coded_by="XM_016873013.2:122..1075"
                     /db_xref="GeneID:107939652"
ORIGIN      
        1 mstsktlenh fkyepvvqtq agfallqrnl sppqpgerrg rrkqaepgrf lgvrrrpwgr
       61 yaaeirdptt kerhwlgtfd taqeaalayd raaisikgaq artnfvysdn scfhvlspfd
      121 qfltsfqtqq pkqtinhgvn sepvphqpdi shsentiptp iikpnnndps ssslssssss
      181 ygssvddsaf ffstdtnsgy lasivprncl nppssnptss hvshqnqshs gnnnyvlptd
      241 vtntefpyfg egmdqeslws sfdqqswels divnpplmde dgcmkafhpy ndnpmmipqa
      301 ssmapfgdiv dfgyslf
//
LOCUS       XP_040944129             459 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 34 [Gossypium hirsutum].
ACCESSION   XP_040944129
VERSION     XP_040944129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088195.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..459
                     /product="zinc finger CCCH domain-containing protein 34"
                     /calculated_mol_wt=49172
     Region          42..67
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          89..114
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          135..159
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          292..317
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          338..364
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     CDS             1..459
                     /gene="LOC121214483"
                     /coded_by="XM_041088195.1:374..1753"
                     /db_xref="GeneID:121214483"
ORIGIN      
        1 mewgpesdle pewtssgpet gleepiprle lgvepksype rpneadciyy lrtgfcgygs
       61 rcrfnhphdr amvmgpgiss igeyperagq pvcqyymrtg tcrfgsscky hhpkdgggfv
      121 ihvplnsygy plrlgekecs yymktgrckf gvtcrfhhpi ssvvqvstpy stpqvphvpa
      181 ptlysmvqsp sslssqqygv vmarpplmpg syvqgpygsl llspsmvsfp swnpypglvn
      241 sstqpsvgsr svfggtplsp lapaytrsyq lvsssvgsss snrkehlfpe ipnqpecqyy
      301 lktgdckfgs sckyhhplev vapksdvils tlglplrpga ppcshysqha vckfgpackf
      361 dhpmeqlsys pstsslsdip vgstiatlap ssdlrpklls gsgkdsdpav msssvsssse
      421 siglvfsega aippsstqqs gpssgpsagr gitkahtsn
//
LOCUS       XP_040944130            1174 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like [Gossypium
            hirsutum].
ACCESSION   XP_040944130
VERSION     XP_040944130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088196.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1174
                     /product="LOW QUALITY PROTEIN: protein ALWAYS EARLY
                     3-like"
                     /calculated_mol_wt=130449
     Region          48..82
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     Region          635..736
                     /region_name="DIRP"
                     /note="pfam06584"
                     /db_xref="CDD:461955"
     Region          <939..1049
                     /region_name="TOPEUc"
                     /note="DNA Topoisomerase I (eukaryota); smart00435"
                     /db_xref="CDD:214661"
     CDS             1..1174
                     /gene="LOC121214484"
                     /coded_by="XM_041088196.1:202..3726"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121214484"
ORIGIN      
        1 mapsrksksv nkkfsyvnev asskdgdssa krsgkrkrkl sdmlgpqwtk eelerfyeay
       61 rkygkdwkkv spmirnrsve mvealytmnr aylslpegta svvgliammt dhysvmggsd
      121 seqesnegmg isrkpqkrsr gkirdqpsks sdkplpdllq fpsansgcls llkrrrsesr
      181 pravgkrtpr vpisfshdkn kgeryfspir qgmklkvdav dddvaheval alteasqrgg
      241 spqvsrtpnr kaetpspvin sermnadset tsakihgsev dedacelslg steadnadya
      301 kdknysrnie gtgtvevqqk gkryyrrkpe ieesvnhqed tkeacsgtee gqqlcefkgn
      361 fdcevedakt srasikgprk rskkvlfegv egtafdalqt ladlslmmpe tadtessvqy
      421 keeknevekt klkgnhlvpg akgsaskasr hgklfghdvr anpeakeahp anvgmrkrrq
      481 ksspyklqip kdetdavsql gespnieasg evknllskgk lsnnvghpkq gkfvrppeha
      541 ssstdqgrdl nnsapstiqv ssvnqvnlpt kirskrktdv repairkgtk ssdnvvkgki
      601 sgpvtlfhdg aldlkeklcn flcsyqarrw cafewfysti dypwfakref veyldhvglg
      661 hiprltrvew gvirsslgkp rrfseqfxke ereklnqyre svrrhyaelr agigeglptd
      721 larplsvgqr viavhpktre ihdgsvltvd ysryriqfds pelgvefvmd vdcmplnpme
      781 nlpaslsrqn aairkfveny nelkmngqsk eskmeenikf mqcdnlenan spsrtspstf
      841 svgnlsqpvk vdssspnlql kigptetvyt qainsqpsav slvqareadv ealsqltral
      901 dkkeaivsel rrmndevlen qkggdnhikd sdsfkkqyaa vllqlnevne qvssallclr
      961 qrntyqgtss gkllnpsgki geqgsqlssf dpmhhvqesv shvaeivess rrkarsmvda
     1021 alkamsslrk ggknieried aidfvnnqls lnefsapapr saapvdsvrs hdnltacssy
     1081 pfatshipem klqnlsdqde lkipsdlisq cvatllmiqk cterqfppgd vaevldsavt
     1141 slkpccsqnl piyteiqkcm giirnqilal vpts
//
LOCUS       XP_016691070             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691070
VERSION     XP_016691070.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835581.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=17516
     CDS             1..159
                     /gene="LOC107908421"
                     /coded_by="XM_016835581.2:116..595"
                     /db_xref="GeneID:107908421"
ORIGIN      
        1 mvkrdkeels eeerkalrgs kfaplpppsl skprlahpgg plttnkaaal akflerklqd
       61 pnglssinpq llelavnnak atvfqsgasr sgtrvrhvds fgdsedssee aksgipepkk
      121 dtnknknknk knkkkknkmk kvvedhectl krpkkkvkl
//
LOCUS       XP_016691071             142 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691071
VERSION     XP_016691071.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835582.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..142
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=15497
     CDS             1..142
                     /gene="LOC107908421"
                     /coded_by="XM_016835582.2:101..529"
                     /db_xref="GeneID:107908421"
ORIGIN      
        1 mvkrdkeels eeerkalrgs kfaplpppsl skprlahpgg plttnkaaal akflerklqd
       61 pnglssinpq llelavnnak atvfqsgasr sgtrvrhvds fgdsedssee aksgipepkk
      121 dtnknknknk knkkkknkmk kl
//
LOCUS       XP_016690463             243 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein At1g05920 [Gossypium hirsutum].
ACCESSION   XP_016690463
VERSION     XP_016690463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834974.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="B3 domain-containing protein At1g05920"
                     /calculated_mol_wt=27683
     Region          118..215
                     /region_name="At2g31720-like"
                     /note="B3 domain-containing protein At2g31720-like;
                     pfam03754"
                     /db_xref="CDD:281714"
     CDS             1..243
                     /gene="LOC107907632"
                     /coded_by="XM_016834974.2:16..747"
                     /db_xref="GeneID:107907632"
ORIGIN      
        1 mmellsrddf kdtkvdpnwg pfdyllhvvh vdqqkfqksh nappppqilc kqdhtgfklr
       61 fkfnnsvglk rkrnlkavee eddgdgdrva pklkpkrskk qeksvcpipp pdlppkfrql
      121 iveemggrgl vlviqktiff sdinptasrf sipfsqvkth dflneaeake lddknpmqvl
      181 lldpsmkgts itlnkwvmgs sslyvltntw npivknnqlk kgdtvqlwsf rmnslpcfal
      241 ikl
//
LOCUS       XP_016691067             470 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose nonfermenting 4-like protein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016691067
VERSION     XP_016691067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..470
                     /product="sucrose nonfermenting 4-like protein isoform X1"
                     /calculated_mol_wt=51771
     Region          23..101
                     /region_name="AMPK1_CBM"
                     /note="Glycogen recognition site of AMP-activated protein
                     kinase; pfam16561"
                     /db_xref="CDD:465176"
     Region          147..296
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(155,157..159,181..183,273,288,290,292..293,296)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          155..229
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(181,194,199..200,203,251,273..275,292)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          251..296
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          341..469
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          341..404
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(363,375,380..381,384,444..446,462)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          423..466
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     CDS             1..470
                     /gene="LOC107908419"
                     /coded_by="XM_016835578.2:351..1763"
                     /db_xref="GeneID:107908419"
ORIGIN      
        1 mfgsdrnpar dagrvstagm vllpiqftwp hggddvsicg sfngwtelvr msqvegcpnv
       61 fkavcavphg sheykffidg ewrhdeqqph rngeygivnt fdtlpvpaev sqhqipavil
      121 nqtiprisee dlrasryqis aflaahtvye llpesgkvva lavdlpvkqa fhilaeqgip
      181 vaplwdfykg kfvgvisasd fililrqlgn hgstlteeel qthtisawke gkarrngqvd
      241 ghgrpiprhl ifagpgdnlk dvalkflqng vatipvihss ledgsfpqll hlaslsgilk
      301 cvcryfkhcs gsfpmlqlpi yaiplgtwvp rigesssrsf amlrptssls salnmlvqar
      361 vssipivddn dslldiysrs ditalakgra ythnlnemtv yqalqlgqds nspyeprtqr
      421 fqmclhtdtl lkvmeqlanp gvrrlvivea gsnrvegiis lsdvfrfllg
//
LOCUS       XP_016691068             464 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose nonfermenting 4-like protein isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016691068
VERSION     XP_016691068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..464
                     /product="sucrose nonfermenting 4-like protein isoform X2"
                     /calculated_mol_wt=51210
     Region          34..95
                     /region_name="AMPK1_CBM"
                     /note="Glycogen recognition site of AMP-activated protein
                     kinase; pfam16561"
                     /db_xref="CDD:465176"
     Region          141..290
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(149,151..153,175..177,267,282,284,286..287,290)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          149..223
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(175,188,193..194,197,245,267..269,286)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          245..290
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          335..463
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          335..398
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(357,369,374..375,378,438..440,456)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          417..460
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     CDS             1..464
                     /gene="LOC107908419"
                     /coded_by="XM_016835579.2:390..1784"
                     /db_xref="GeneID:107908419"
ORIGIN      
        1 mpaecplpaw ccylfslhgh mvvtmslyva lsmgdnsiis lsfnmllveg cpnvfkavca
       61 vphgsheykf fidgewrhde qqphrngeyg ivntfdtlpv paevsqhqip avilnqtipr
      121 iseedlrasr yqisaflaah tvyellpesg kvvalavdlp vkqafhilae qgipvaplwd
      181 fykgkfvgvi sasdfililr qlgnhgstlt eeelqthtis awkegkarrn gqvdghgrpi
      241 prhlifagpg dnlkdvalkf lqngvatipv ihssledgsf pqllhlasls gilkcvcryf
      301 khcsgsfpml qlpiyaiplg twvprigess srsfamlrpt sslssalnml vqarvssipi
      361 vddndslldi ysrsditala kgraythnln emtvyqalql gqdsnspyep rtqrfqmclh
      421 tdtllkvmeq lanpgvrrlv iveagsnrve giislsdvfr fllg
//
LOCUS       XP_040944132             440 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose nonfermenting 4-like protein isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944132
VERSION     XP_040944132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088198.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..440
                     /product="sucrose nonfermenting 4-like protein isoform X3"
                     /calculated_mol_wt=48438
     Region          23..101
                     /region_name="AMPK1_CBM"
                     /note="Glycogen recognition site of AMP-activated protein
                     kinase; pfam16561"
                     /db_xref="CDD:465176"
     Region          147..266
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          221..266
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          311..439
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          311..374
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(333,345,350..351,354,414..416,432)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          393..436
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     CDS             1..440
                     /gene="LOC107908419"
                     /coded_by="XM_041088198.1:355..1677"
                     /db_xref="GeneID:107908419"
ORIGIN      
        1 mfgsdrnpar dagrvstagm vllpiqftwp hggddvsicg sfngwtelvr msqvegcpnv
       61 fkavcavphg sheykffidg ewrhdeqqph rngeygivnt fdtlpvpaev sqhqipavil
      121 nqtiprisee dlrasryqis aflaahtvye llpesgkvva lavdlpvkqa fhilaeqlgn
      181 hgstlteeel qthtisawke gkarrngqvd ghgrpiprhl ifagpgdnlk dvalkflqng
      241 vatipvihss ledgsfpqll hlaslsgilk cvcryfkhcs gsfpmlqlpi yaiplgtwvp
      301 rigesssrsf amlrptssls salnmlvqar vssipivddn dslldiysrs ditalakgra
      361 ythnlnemtv yqalqlgqds nspyeprtqr fqmclhtdtl lkvmeqlanp gvrrlvivea
      421 gsnrvegiis lsdvfrfllg
//
LOCUS       XP_040944133            1646 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine-tryptophan domain-containing zinc finger protein 7
            [Gossypium hirsutum].
ACCESSION   XP_040944133
VERSION     XP_040944133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088199.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1646
                     /product="cysteine-tryptophan domain-containing zinc
                     finger protein 7"
                     /calculated_mol_wt=180162
     Region          617..663
                     /region_name="zf-CW"
                     /note="CW-type Zinc Finger; pfam07496"
                     /db_xref="CDD:462181"
     CDS             1..1646
                     /gene="LOC121214485"
                     /coded_by="XM_041088199.1:462..5402"
                     /db_xref="GeneID:121214485"
ORIGIN      
        1 mdensdleeg eacfhedegd ninpdtafsy idekiknvlg hfqkvfeggv saenlgakfg
       61 gygsflptye rspprlsrpk tplrnssisg stnnlsmega sqnlkappna pstgrpgnts
      121 cpsgniaakh dsrltsaqva eksilkdesf nragipsdqk tlkfrikmgs dkkaqkiaai
      181 ysglgldysp ssslgnspde sggtlmisqe ttsesptril qvmtsnhvpg gvlisplhds
      241 llwflrkeke rpsrenksts llkacqehps vlvdksimgn kkqlnekktk fliekseele
      301 esnnvnhrtv esgktllikk kheneiagge slpndlkpta lsnsvniame atarvcdvaa
      361 ednlnaskgr llssdsaked slesisgrsr tsgkkkkrdk rssldgngwe qsvvnfnkna
      421 svdlgdnvgs kedsktkvgq vatfrvqnki nipskkektl aegkrskgsk nngevadsmk
      481 eslrldvgat lkdtvsscqg fpsgkdkiqk lklqkdmkkv qdnhrdslet nsgqksdrme
      541 ptmrhfqnrp kgygpmdfem eqngyldksk vifsgrtvnn qllgvdvpgv vphlndktla
      601 sqtaapaata pvlieenwvq cdrchkwrll pfdtrpeqlp ekwlcsmldw lprmnrcdis
      661 eeettkalna fyqlpvaenq nnpqnhangt mslvssahlq hldqnnssfn sqalsikgkk
      721 nhalkevqks ggsgpnqmst skkkykqqes lkrrsindma qapvesfvmk ksafeekerl
      781 lvggetkkak mknkresgly eyegskksrt evtstaekhq stnldnrtlg lnssttlptq
      841 angrsvqnss gcsnsggvkh dikektvasl kklvdqtqas sdagsldmri cdkrapvkkr
      901 kldwqdsqng nelcmkeess esgfrnekkl rfskiegkqs nrndgdgvsn rksmdhsigg
      961 ieearsidrv qqsskhkkks sslkvldgld ssrrdsgtgq iliaatssss kvsgsrktra
     1021 nfeeargspv esvssspmrt sypeklattg sgkdaansgi pscgnlrrcw ngegtfelaq
     1081 sgtetkekvs vdfnsrshks stldyrdrds ickisirnkp ssrlgnshll ngdshsaetv
     1141 qhtvdhshse drlnkecggn alfsqksddv snsqakdskr ssavdkmkgs nlteeqedmc
     1201 srksmnyqsd vvkshaclqe tfvdckrnlh kssedeqrsy gkknpsgqps sdsrigtqln
     1261 ikhdefdvks aapfctkgnv apeqnvtqdf sgqtevmqae vksgmskssl hfetescqer
     1321 kghrtvpeaq eravydgvpv nassrvnvsk alkqpgkaag skngsahdlg qqmpdlhvvr
     1381 nlnacspvrv ksssltvtda lndaqglrny adrlkssgfv fesneiyfqa alkflgvaal
     1441 leasnsesgr hdmnhlqvyg tatklcemca keyerrqema taalsykcve vaymrivyck
     1501 hsassrdlke lqgtvqmvpq gespsssisd vdnnlnnqat adkaplakgn asyvagthal
     1561 varnrpsfgr lldftqdvss ameasrkslt cfmaatssle aaqniecits vrkvidfsfq
     1621 dvdelaclve qamqaisrsd lgstrd
//
LOCUS       XP_016691066             242 aa            linear   PLN 06-AUG-2024
DEFINITION  cullin-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016691066
VERSION     XP_016691066.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835577.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..242
                     /product="cullin-1 isoform X1"
                     /calculated_mol_wt=28473
     Region          9..>231
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..242
                     /gene="LOC107908417"
                     /coded_by="XM_016835577.2:251..979"
                     /db_xref="GeneID:107908417"
ORIGIN      
        1 mgfpylmari vfelckpnrr ggnsevlydk yhnflkhyit skvwpslqgk kdealvkeie
       61 qrwsnhkvmt rwitrffrfl dryfvpcrkl ppleqstlla fynlvfgefn heikdavlsl
      121 idreregegi dqalirnivg iyvdvgqgsm kyyeqdfegd mfkatasfys tkaskwlkte
      181 sykdymlkve cclkherdtv ccylqstshk klleiveyel msvheselke kkqtdesdsc
      241 ig
//
LOCUS       XP_016691065             253 aa            linear   PLN 06-AUG-2024
DEFINITION  cullin-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016691065
VERSION     XP_016691065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835576.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="cullin-1 isoform X2"
                     /calculated_mol_wt=29973
     Region          8..>242
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..253
                     /gene="LOC107908417"
                     /coded_by="XM_016835576.2:134..895"
                     /db_xref="GeneID:107908417"
ORIGIN      
        1 mmmikkvhrf sseeymrmys ivfelckpnr rggnsevlyd kyhnflkhyi tskvwpslqg
       61 kkdealvkei eqrwsnhkvm trwitrffrf ldryfvpcrk lppleqstll afynlvfgef
      121 nheikdavls lidreregeg idqalirniv giyvdvgqgs mkyyeqdfeg dmfkatasfy
      181 stkaskwlkt esykdymlkv ecclkherdt vccylqstsh kklleiveye lmsvheselk
      241 ekkqtdesds cig
//
LOCUS       XP_016690869             151 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transcription factor Y subunit B-5 [Gossypium hirsutum].
ACCESSION   XP_016690869
VERSION     XP_016690869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..151
                     /product="nuclear transcription factor Y subunit B-5"
                     /calculated_mol_wt=16967
     Region          18..108
                     /region_name="HFD_NFYB"
                     /note="histone-fold domain found in nuclear transcription
                     factor Y subunit beta (NF-YB) and similar proteins;
                     cd22907"
                     /db_xref="CDD:467032"
     Site            order(18,20..21,24,50,53..54,58,61..62,65..66,69,89..91,
                     93)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(21..26,29,33..34,37..39,42..45,48,51..52,55..60,
                     62..65,68,77..81,84,88,92..93,96,100,103,107..108)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467032"
     Site            order(21,26..29,32,35,43..46,49,77..78)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467032"
     CDS             1..151
                     /gene="LOC107908117"
                     /coded_by="XM_016835380.2:155..610"
                     /db_xref="GeneID:107908117"
ORIGIN      
        1 maenigtsnd gggdgygfke qdhllpianv grimkqilpp nakiskeake tmqecvsefi
       61 sfvtgeasek crkerrktvn gddicwalat lgfdnyavpl krylykfref egdkaanqvk
      121 vsisnskddd ddeaqkqqqq splmfqhdwk q
//
LOCUS       XP_016691063             332 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial thiamine diphosphate carrier 2 [Gossypium hirsutum].
ACCESSION   XP_016691063
VERSION     XP_016691063.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835574.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="mitochondrial thiamine diphosphate carrier 2"
                     /calculated_mol_wt=36414
     Region          11..319
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..332
                     /gene="LOC107908415"
                     /coded_by="XM_016835574.2:444..1442"
                     /db_xref="GeneID:107908415"
ORIGIN      
        1 meepgqlkra lldasagaia ggisrtvtsp ldvikirfqv qleptaswal irrdlsgssk
       61 ytgmfqatke ifreeglpgf wrgnvpallm vmpytaiqfa vlhklktfvs gssktadhin
      121 lspylsyisg alagcaatlg sypfdllrti lasqgepkiy pnmrsatfdi lrtrgfrgly
      181 aglsptlvei ipyaglqfgt ydtfkrwcma wnnlrsssis sttgdslssf qlficglaag
      241 tcaklvchpl dvvkkrfqie glqrhpkyga rveqrayrnl fdalhrilks egwhglykgi
      301 vpstikaapa gavtfvayef tsdwlesift st
//
LOCUS       XP_016691064             181 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691064
VERSION     XP_016691064.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835575.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20228
     CDS             1..181
                     /gene="LOC107908416"
                     /coded_by="XM_016835575.2:225..770"
                     /db_xref="GeneID:107908416"
ORIGIN      
        1 mgqafrratg rlrsmdqsqp tkprrplgpt deqkisrvsq henldhasva rsnpenvlee
       61 rdpkydamls qmvgrisakp ggklemgeaf vaenpsrplp klrnttvesg ryeerpappg
      121 tlnvkqlrhi mllhqgkadd hegpmdvnqi aekfkldvaq vqtilqfisi ppedntkpek
      181 h
//
LOCUS       XP_016690868             109 aa            linear   PLN 06-AUG-2024
DEFINITION  flowering-promoting factor 1 [Gossypium hirsutum].
ACCESSION   XP_016690868
VERSION     XP_016690868.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835379.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..109
                     /product="flowering-promoting factor 1"
                     /calculated_mol_wt=12449
     CDS             1..109
                     /gene="LOC107908116"
                     /coded_by="XM_016835379.2:63..392"
                     /db_xref="GeneID:107908116"
ORIGIN      
        1 msgpwcfnhk ngvvrlvens gsdqrpkpeg kvlvhipsne vitsyeilkt kllslgwery
       61 dggdpdlfqf hkrssidlis lpkdftkfks vymydivvkn pnmfmvmdk
//
LOCUS       XP_040944134             126 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RALF-like 33 [Gossypium hirsutum].
ACCESSION   XP_040944134
VERSION     XP_040944134.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088200.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..126
                     /product="protein RALF-like 33"
                     /calculated_mol_wt=13698
     Region          13..126
                     /region_name="RALF"
                     /note="Rapid ALkalinization Factor (RALF); cl23823"
                     /db_xref="CDD:451565"
     CDS             1..126
                     /gene="LOC121214486"
                     /coded_by="XM_041088200.1:94..474"
                     /db_xref="GeneID:121214486"
ORIGIN      
        1 mgssrisftf laistilavh valsssfptl davgghflpi ksecsgsnae clmlsgeess
       61 dfdaefames eisrrilart ryisygalrr ntvpcsrrga syyncrpgaq anpysrgcsr
      121 itrcrr
//
LOCUS       XP_040944135              84 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock factor-binding protein [Gossypium hirsutum].
ACCESSION   XP_040944135
VERSION     XP_040944135.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088201.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..84
                     /product="heat shock factor-binding protein"
                     /calculated_mol_wt=9121
     Region          15..64
                     /region_name="HSBP1"
                     /note="Heat shock factor binding protein 1; pfam06825"
                     /db_xref="CDD:429139"
     CDS             1..84
                     /gene="LOC121202998"
                     /coded_by="XM_041088201.1:489..743"
                     /db_xref="GeneID:121202998"
ORIGIN      
        1 mdgndsvdsk qdttdmalfv qnllqqmqsr fqtmsdsiit kidemgsrid eleqsindlk
       61 aemgaenssp pvppaddsks pnes
//
LOCUS       XP_016696116             447 aa            linear   PLN 06-AUG-2024
DEFINITION  xyloglucan 6-xylosyltransferase 2 [Gossypium hirsutum].
ACCESSION   XP_016696116
VERSION     XP_016696116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..447
                     /product="xyloglucan 6-xylosyltransferase 2"
                     /calculated_mol_wt=51742
     Region          7..439
                     /region_name="PLN03182"
                     /note="xyloglucan 6-xylosyltransferase; Provisional"
                     /db_xref="CDD:215617"
     CDS             1..447
                     /gene="LOC107912443"
                     /coded_by="XM_016840627.2:148..1491"
                     /db_xref="GeneID:107912443"
ORIGIN      
        1 mlnrwlkvrr srakiivlcf vvavivlhgt fnpvnpgysa denqnhhsda hskrvesrrl
       61 leeaqndaaq gdnndnksya efdiakilid eeegekekpd pnkpyslgpk isdwdqqrse
      121 wlktnpdfpn figpnkprvl lvtgsspkpc enpvgdhyll ksiknkidyc rlhgidifyn
      181 malldaemag fwaklplirk lllshpeief lwwmdsdamf tdmayelpwe rykdfnmvmh
      241 gwnemvyndk nwiglntgsf llrncqwsld lldawapmgp kgkvreeagk iltrelkdrp
      301 vfeaddqsai vyllvkerak wgekvylena yylhgywgil vdryeemien yhpglgdhrw
      361 plvthfvgck pcgkfgdysv erclrqmdra fnfgdnqilq mygfthksla srrvkrvrne
      421 tanplevkde lgllhpsfka vkvspss
//
LOCUS       XP_040944136             301 aa            linear   PLN 06-AUG-2024
DEFINITION  TOG array regulator of axonemal microtubules protein 2 [Gossypium
            hirsutum].
ACCESSION   XP_040944136
VERSION     XP_040944136.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088202.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..301
                     /product="TOG array regulator of axonemal microtubules
                     protein 2"
                     /calculated_mol_wt=33124
     CDS             1..301
                     /gene="LOC121214487"
                     /coded_by="XM_041088202.1:293..1198"
                     /db_xref="GeneID:121214487"
ORIGIN      
        1 malrpidnal pvvpdglrpk kqakvsiqpq kkaseisvnd enkaplpqpi dasvdyvase
       61 dlkpfqdpes niqslvegld skdwvkvcqs lndarrfsly hpglllpvle kvmlvvvksm
      121 knprsalckt simaasdifn aygeklldst dssafdqlll qlllkasqdk kfvceeadks
      181 ltamvnsiaa lpllqklrgf vnhgnlrvra kaavsisnsv ykmgseeike fgsvtllqma
      241 sdllndrlpe areaarsivl svyeaftene kldtvedwqs fcqsnlsmiq aqlmikvvss
      301 q
//
LOCUS       XP_040944137             856 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944137
VERSION     XP_040944137.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088203.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..856
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=93969
     Region          59..170
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          179..>246
                     /region_name="BACK"
                     /note="BTB And C-terminal Kelch; smart00875"
                     /db_xref="CDD:197943"
     CDS             1..856
                     /gene="LOC107912445"
                     /coded_by="XM_041088203.1:52..2622"
                     /db_xref="GeneID:107912445"
ORIGIN      
        1 mepqfskhrs ygqpthhhhh qpqlkmsipp ppppppqhse ndrscselra fdcnlnslce
       61 hirmegfngg sfsdivvnam gstyhlhrli lsrssyfrnm lhgpwkeans pvvtlnvdds
      121 nvngeaiava laylyghhpk lndnnafrvl aaasfldlqd lcaictdfii selwtsnfla
      181 yqvfaenqdy gihgervrsa cwgylcqsga melkevlpkl ssqtlhallt sdelwvssee
      241 krfelafytl lakgafyqpe rsgqgsssss eidvgtsles skgkgknlvd sfnvdlagcv
      301 vdipagissa dqqvqrpkya rseslcpcsm dqsssmsssf segirtshsy vempigdgtg
      361 ggmamegpse egscyqlnnn nwlasdqskh cssedsscsg lmlndwgrcs maslswggrv
      421 vgkrqvksya kgncgvgged ydafvnifeg gsllycnmsf eallnvrkql eelgfpckal
      481 ndglwlqmll rqrvqeigad tcknccltsm qcscrqpfgi qhgvattgyy vqehdqshlt
      541 gnirnvyvad naqdegnglf rpvrvqvrga idglagigrg atsvpatlwt ptrfvfsrvp
      601 fgmgnrigqq spanedsear adhngdmsgg gltalvelsq ggtsnainvr eeqterscel
      661 dpqskvpmts iarpatsgia mqmletpdra igidwenats ssisldlktp lshfpsfrfg
      721 vqfedvhrls dgqvkhspef fyagslwkvs vqafndedpq grrtlglflh rrkaeitdsl
      781 gkvhmfidsr ekvtaryqli cpskrdvmvf gsfkqrgtll pkapkgwgwr tallfdelad
      841 llqngalrva avvqlv
//
LOCUS       XP_040944138             852 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944138
VERSION     XP_040944138.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088204.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..852
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=93571
     Region          59..170
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          179..>246
                     /region_name="BACK"
                     /note="BTB And C-terminal Kelch; smart00875"
                     /db_xref="CDD:197943"
     CDS             1..852
                     /gene="LOC107912445"
                     /coded_by="XM_041088204.1:52..2610"
                     /db_xref="GeneID:107912445"
ORIGIN      
        1 mepqfskhrs ygqpthhhhh qpqlkmsipp ppppppqhse ndrscselra fdcnlnslce
       61 hirmegfngg sfsdivvnam gstyhlhrli lsrssyfrnm lhgpwkeans pvvtlnvdds
      121 nvngeaiava laylyghhpk lndnnafrvl aaasfldlqd lcaictdfii selwtsnfla
      181 yqvfaenqdy gihgervrsa cwgylcqsga melkevlpkl ssqtlhallt sdelwvssee
      241 krfelafytl lakgafyqpe rsgqgsssss eidvgtsles skgkgknlvd sfngcvvdip
      301 agissadqqv qrpkyarses lcpcsmdqss smsssfsegi rtshsyvemp igdgtgggma
      361 megpseegsc yqlnnnnwla sdqskhcsse dsscsglmln dwgrcsmasl swggrvvgkr
      421 qvksyakgnc gvggedydaf vnifeggsll ycnmsfeall nvrkqleelg fpckalndgl
      481 wlqmllrqrv qeigadtckn ccltsmqcsc rqpfgiqhgv attgyyvqeh dqshltgnir
      541 nvyvadnaqd egnglfrpvr vqvrgaidgl agigrgatsv patlwtptrf vfsrvpfgmg
      601 nrigqqspan edsearadhn gdmsggglta lvelsqggts nainvreeqt ersceldpqs
      661 kvpmtsiarp atsgiamqml etpdraigid wenatsssis ldlktplshf psfrfgvqfe
      721 dvhrlsdgqv khspeffyag slwkvsvqaf ndedpqgrrt lglflhrrka eitdslgkvh
      781 mfidsrekvt aryqlicpsk rdvmvfgsfk qrgtllpkap kgwgwrtall fdeladllqn
      841 galrvaavvq lv
//
LOCUS       XP_016696119             168 aa            linear   PLN 06-AUG-2024
DEFINITION  translationally-controlled tumor protein homolog [Gossypium
            hirsutum].
ACCESSION   XP_016696119
VERSION     XP_016696119.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="translationally-controlled tumor protein
                     homolog"
                     /calculated_mol_wt=19014
     Region          1..163
                     /region_name="TCTP"
                     /note="Translationally controlled tumour protein;
                     pfam00838"
                     /db_xref="CDD:459957"
     CDS             1..168
                     /gene="LOC107912447"
                     /coded_by="XM_016840630.2:1728..2234"
                     /db_xref="GeneID:107912447"
ORIGIN      
        1 mlvyqdlisg dellsdsfpy keiengmlwe vegkwvvqga idvdiganps aedadedegv
       61 ddqsvkvvdi vdtfrlqeqp pfdkkqfvvf mkkfiknltp kldaekqesf kkniegatkf
      121 llsklkdlqf figesmhddg clvfayykdg avdptflyfa yalkevkc
//
LOCUS       XP_016696122             486 aa            linear   PLN 06-AUG-2024
DEFINITION  protein pleiotropic regulatory locus 1 [Gossypium hirsutum].
ACCESSION   XP_016696122
VERSION     XP_016696122.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840633.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..486
                     /product="protein pleiotropic regulatory locus 1"
                     /calculated_mol_wt=53480
     Region          168..463
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(175,193,197,203..204,216..217,235,239,245..246,
                     258..259,276,281,287..288,301,318,323,329..330,342..343,
                     361,365,370..371,383..384,402,406,412..413,428..429,452,
                     456,462..463)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          180..216
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          221..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          264..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..341
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          347..382
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          389..412
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..462
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..486
                     /gene="LOC107912450"
                     /coded_by="XM_016840633.2:266..1726"
                     /db_xref="GeneID:107912450"
ORIGIN      
        1 maaptlemep vepqslkkls lkslkraldl fspihgqfaa pdpeskkirm shkinveycg
       61 iktasgqtsr qansgaadtg nqgsvpsnsl altgpadsrd sqkggaqnal vvgpslqpkg
      121 qndvgtsgks saitsasapf serlttsaii eripskwprp vwhrpwknyr visghlgwvr
      181 svafdpsnnw fctgsadrti kiwdvasgrl kltltghieq irglavsskh tymfsagddk
      241 qvkcwdleqn kvirsyhghl sgvyclalhp tidilltggr dsvcrvwdir tkmqifalsg
      301 hdntvcsvft rptdpqivtg shdttikfwd lrygktmstl thhkksvram aphpkehsfa
      361 sasadnikkf slpkgeflhn mlsqqktiin tmavnedgvm atggdngslw fwdwrsghnf
      421 qqaqtivqpg sldseagiya laydvtgtrl isceadktik mwkedetate qthplnfkpp
      481 kdirrf
//
LOCUS       XP_016696120             352 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 49 [Gossypium hirsutum].
ACCESSION   XP_016696120
VERSION     XP_016696120.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840631.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..352
                     /product="chaperone protein dnaJ 49"
                     /calculated_mol_wt=40670
     Region          106..>237
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          106..167
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(134..136,144,147..148,151..152)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          261..346
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..352
                     /gene="LOC107912449"
                     /coded_by="XM_016840631.2:232..1290"
                     /db_xref="GeneID:107912449"
ORIGIN      
        1 mdgnkdealr cvriaeeaia sgnkqralkf ikiaqrlnht lsvdelldac knldsgttpv
       61 spvgekrvls deneggstkl degfdgdrsy teehvqlirq ikrnkdyysi lgvektcsvd
      121 eirkaykkls lkvhpdknka pgseeafktv ckafkclsdd nsrrqydqvg lvdqfeynqr
      181 hnvrqrrrry ehdlfdddfd pdeifrsffg qgdmfrasqv yrtrgmgghq reehhrgggs
      241 sflillqmlp illifllafl ptsepeyslf rnysyqipkt tekfgveffv ksstfdvnfp
      301 qgsaaranve dtvikdykhm lwrychverh krrwnknlpt phcnklqnlg la
//
LOCUS       XP_016696121             352 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 49 [Gossypium hirsutum].
ACCESSION   XP_016696121
VERSION     XP_016696121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840632.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..352
                     /product="chaperone protein dnaJ 49"
                     /calculated_mol_wt=40670
     Region          106..>237
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          106..167
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(134..136,144,147..148,151..152)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          261..346
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..352
                     /gene="LOC107912449"
                     /coded_by="XM_016840632.2:232..1290"
                     /db_xref="GeneID:107912449"
ORIGIN      
        1 mdgnkdealr cvriaeeaia sgnkqralkf ikiaqrlnht lsvdelldac knldsgttpv
       61 spvgekrvls deneggstkl degfdgdrsy teehvqlirq ikrnkdyysi lgvektcsvd
      121 eirkaykkls lkvhpdknka pgseeafktv ckafkclsdd nsrrqydqvg lvdqfeynqr
      181 hnvrqrrrry ehdlfdddfd pdeifrsffg qgdmfrasqv yrtrgmgghq reehhrgggs
      241 sflillqmlp illifllafl ptsepeyslf rnysyqipkt tekfgveffv ksstfdvnfp
      301 qgsaaranve dtvikdykhm lwrychverh krrwnknlpt phcnklqnlg la
//
LOCUS       XP_040944139             352 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 49 [Gossypium hirsutum].
ACCESSION   XP_040944139
VERSION     XP_040944139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088205.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..352
                     /product="chaperone protein dnaJ 49"
                     /calculated_mol_wt=40670
     Region          106..>237
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          106..167
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(134..136,144,147..148,151..152)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          261..346
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..352
                     /gene="LOC107912449"
                     /coded_by="XM_041088205.1:232..1290"
                     /db_xref="GeneID:107912449"
ORIGIN      
        1 mdgnkdealr cvriaeeaia sgnkqralkf ikiaqrlnht lsvdelldac knldsgttpv
       61 spvgekrvls deneggstkl degfdgdrsy teehvqlirq ikrnkdyysi lgvektcsvd
      121 eirkaykkls lkvhpdknka pgseeafktv ckafkclsdd nsrrqydqvg lvdqfeynqr
      181 hnvrqrrrry ehdlfdddfd pdeifrsffg qgdmfrasqv yrtrgmgghq reehhrgggs
      241 sflillqmlp illifllafl ptsepeyslf rnysyqipkt tekfgveffv ksstfdvnfp
      301 qgsaaranve dtvikdykhm lwrychverh krrwnknlpt phcnklqnlg la
//
LOCUS       XP_016696123             449 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucuronic acid decarboxylase 2 [Gossypium hirsutum].
ACCESSION   XP_016696123
VERSION     XP_016696123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840634.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="UDP-glucuronic acid decarboxylase 2"
                     /calculated_mol_wt=49257
     Region          1..449
                     /region_name="PLN02206"
                     /note="UDP-glucuronate decarboxylase"
                     /db_xref="CDD:177856"
     CDS             1..449
                     /gene="LOC107912451"
                     /coded_by="XM_016840634.2:109..1458"
                     /db_xref="GeneID:107912451"
ORIGIN      
        1 maselihrnq ttqksspnis pgtpsspvrn wktpfryvaq kqrfffvlvg iaiaalffns
       61 fpvstsslsq elsgggggag liagsvsglg aessevtrrv lyeaytegfr grnvvaagkv
      121 plglkkknlr ivvtggagfv gshlvdrlia rgdsvivvdn fftgrkenlm hhfgnpkfel
      181 irhdvvepil levdqiyhla cpaspvhykf npvktiktnv vgtlnmlgla krvgarfllt
      241 stsevygdpl qhpqvetywg nvnpigvrsc ydegkrtaet ltmdyhrslg ievriarifn
      301 tygprmcidd grvvsnfvaq alrkepmtvy gdgkqtrsfq yvsdlvegli rlmegdhvgp
      361 fnlgnpgeft mlelaevvqe aidpnakief rpnteddphk rkpdiskakq llgweptisl
      421 rkglplmvsd frqrifgtpk tligggata
//
LOCUS       XP_016696124             237 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET17 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016696124
VERSION     XP_016696124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840635.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="bidirectional sugar transporter SWEET17 isoform
                     X1"
                     /calculated_mol_wt=25721
     Region          8..94
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     Region          131..214
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..237
                     /gene="LOC107912452"
                     /coded_by="XM_016840635.2:201..914"
                     /db_xref="GeneID:107912452"
ORIGIN      
        1 meilslsfvv gtignvisvl vflspigtfe riikhksted fqslpyictl lnsslwtyyg
       61 itkpggllva tvngfgifve avyvglflty apkkmklktg vlvgilnvgf vasaivvtql
      121 alesetqiga iglmcsglni imygsplaam ktvvrtksve ympfflsffl flnggiwafy
      181 allmhdyflg vpngigcllg taqlllyaiy knakpsnnts lqglmeqkep lvsheyv
//
LOCUS       XP_016696125             197 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET17 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016696125
VERSION     XP_016696125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840636.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..197
                     /product="bidirectional sugar transporter SWEET17 isoform
                     X2"
                     /calculated_mol_wt=20968
     Region          8..94
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..197
                     /gene="LOC107912452"
                     /coded_by="XM_016840636.2:201..794"
                     /db_xref="GeneID:107912452"
ORIGIN      
        1 meilslsfvv gtignvisvl vflspigtfe riikhksted fqslpyictl lnsslwtyyg
       61 itkpggllva tvngfgifve avyvglflty apkkmklktg vlvgilnvgf vasaivvtql
      121 alesetqiga iglmcsglni imygsplaam vpngigcllg taqlllyaiy knakpsnnts
      181 lqglmeqkep lvsheyv
//
LOCUS       XP_016696126             124 aa            linear   PLN 06-AUG-2024
DEFINITION  dynein light chain 1, cytoplasmic [Gossypium hirsutum].
ACCESSION   XP_016696126
VERSION     XP_016696126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840637.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..124
                     /product="dynein light chain 1, cytoplasmic"
                     /calculated_mol_wt=13721
     Region          40..123
                     /region_name="DLC-like_DYNLL1_DYNLL2"
                     /note="dynein light chain (DLC)-like domain found in the
                     cytoplasmic dynein light chain 1 (DYNLL1) family; cd21452"
                     /db_xref="CDD:412000"
     CDS             1..124
                     /gene="LOC107912454"
                     /coded_by="XM_016840637.2:196..570"
                     /db_xref="GeneID:107912454"
ORIGIN      
        1 mnseeakrsi sgaltvkpat derkpapalt aesttlaakk vviksadmkd dmqkeavnia
       61 iaafeknnve kdvaehikke fdkrhgptwh civgrnfgsy vthetnhfvy fyldqkavll
      121 fksg
//
LOCUS       XP_016694648             136 aa            linear   PLN 06-AUG-2024
DEFINITION  FCS-Like Zinc finger 15 [Gossypium hirsutum].
ACCESSION   XP_016694648
VERSION     XP_016694648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016839159.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="FCS-Like Zinc finger 15"
                     /calculated_mol_wt=14798
     Region          53..99
                     /region_name="zf-FLZ"
                     /note="zinc-finger of the FCS-type, C2-C2; pfam04570"
                     /db_xref="CDD:428015"
     CDS             1..136
                     /gene="LOC107911290"
                     /coded_by="XM_016839159.2:106..516"
                     /db_xref="GeneID:107911290"
ORIGIN      
        1 mvglsvilen qksgrninii skkspqvisk tsmlintsss sskvsfvqse lnyvapafle
       61 qcflckqkll pakdiymykg drgfcsvecr crqilmdeee ilkkancsla amkpppssas
      121 sssahrhgka grnhac
//
LOCUS       XP_016691199             493 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 55 [Gossypium hirsutum].
ACCESSION   XP_016691199
VERSION     XP_016691199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835710.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..493
                     /product="protein DETOXIFICATION 55"
                     /calculated_mol_wt=53136
     Region          20..472
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(275,279,307,310,389,393,420,446,450)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..493
                     /gene="LOC107908528"
                     /coded_by="XM_016835710.2:122..1603"
                     /db_xref="GeneID:107908528"
ORIGIN      
        1 mveaegshqk yptlpqvmee vkritdigfp vlamslvgyl knmvlvvcmg rlgslelagg
       61 alaigftnis gysvlsglat gmeslcgqaf gsrnllvasl tlqrtivmll fasipigliw
      121 fnlepimlsl nqdpeitkva shycqfaipd liansllhpl riymrskgts wplmwsafvs
      181 tvfhlpitig ltfglrlgvp giaistfitn fntlffllcc mfytrttlvd pedsiqtpls
      241 ppplpslsst almgrkewgv llrlaipsci avclewwwye fmtilagnls eprvalatsa
      301 iviqttslmy tlptalsasa strvgnelga grptraklaa ivaiglslvt sffgligtiv
      361 grqawgrvft kdnevieltm ivlpiiglce lancpqttsc gilrgsarpg igatinfysf
      421 ymvgaplaiv lgfvwgvgfv glcygllaaq vacvvsmltv ifktdwekes lkandlvgsk
      481 sdhfahgdqt rii
//
LOCUS       XP_016690881            1057 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE EXPRESSED 2 [Gossypium hirsutum].
ACCESSION   XP_016690881
VERSION     XP_016690881.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835392.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690881.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1057
                     /product="protein GAMETE EXPRESSED 2"
                     /calculated_mol_wt=117188
     Region          358..479
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Region          <546..588
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          581..665
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     CDS             1..1057
                     /gene="LOC107908137"
                     /coded_by="XM_016835392.2:35..3208"
                     /db_xref="GeneID:107908137"
ORIGIN      
        1 maakvhfili stltlllass adeatvpkfa fswlddkdtf kagetatiki kvlgnfdskg
       61 nasldrtafk plvtvngktg nssyisgvfl didddpstwq ivfipilagi fnvilnddpf
      121 kvmdsslhft vesgpmypsa svaswlgfln efeagskapv lilpkdafgn nvtsideels
      181 synisvtalh engsianlln itskawnefg yiivefiavk agkfllniqg anqtlngspl
      241 pfkvnpgpld vsnciakwkf efnawqifsk meiliyqqdq cgnlvpglye fdadviesdt
      301 nlsipvtdlq feevepgvql fsfsmskagn flltisdmkh nksisympya ytvfvgycdg
      361 fksiingtgl ntsvageqae fsvylrdafe ypspveverl rveirsetds tsvsptiypt
      421 qisngmhvqa kfttilpppg slnvwatafn vtytpqkrgi ykihifcgni ilnggtpftk
      481 evkpgevnis vsgivkfspk apklvrneiv vrlldsfsnp vmsensklsl vltsvnkpgf
      541 snwmfvdnsd gsyighylam evgtyemcvl fegkhlspcp ftvnvygsey fpkayddkis
      601 lwedesisfd vlendyfags natiiefskp ihgsllqygr lfrytpykdy fgndsfqytm
      661 ldingdlata tvkisvltip pqfvsfpsql qaiedlispr fggyngfelk ysdpmenisv
      721 ilsakhgtif lspmsmqfwq piwsefcvtn gdekgtnlsi egrlevinfa lqsiqylgng
      781 nfsgndtlrv sarnrngvnd ldvqvvvdpi ndppyvnvpe fivlnntrde sllfdietdq
      841 flfsigdpdi lnfpggepgf dlalsmevsd gfllatlpaa lisstelklk ysyqwqplqt
      901 yvtiskhfmv kamgirfras lndcntvmqq lsyhggehgs avltmklsdl ghhgcysdcv
      961 drvtkalvae atvnlirrkp msslavhtle tvivieflll lslgfmivff tckcaillvk
     1021 ekrrenpcns elsrhqniqt epvsktsmpf qqsrdil
//
LOCUS       XP_016691198             165 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691198
VERSION     XP_016691198.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835709.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..165
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19021
     CDS             1..165
                     /gene="LOC107908527"
                     /coded_by="XM_016835709.2:329..826"
                     /db_xref="GeneID:107908527"
ORIGIN      
        1 msnkspifpm pephhfsdyg fdpqfhyfqv leqarkhkkg trdsidslqf klekpiskdd
       61 pksktkkyww rnallffnwk kwspnsnnqh ddrtkakalr asnsgpiymi etsnngsttp
      121 yrtssrpssg pltgistpyi slrelnmeqq qhrvstsslp iylvt
//
LOCUS       XP_016691197             696 aa            linear   PLN 06-AUG-2024
DEFINITION  condensin-2 complex subunit H2 [Gossypium hirsutum].
ACCESSION   XP_016691197
VERSION     XP_016691197.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835708.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..696
                     /product="condensin-2 complex subunit H2"
                     /calculated_mol_wt=77309
     Region          25..142
                     /region_name="CNDH2_N"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2,
                     N-terminal; pfam06278"
                     /db_xref="CDD:461866"
     Region          164..264
                     /region_name="CNDH2_M"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2, mid
                     domain; pfam16869"
                     /db_xref="CDD:435617"
     Region          319..604
                     /region_name="CNDH2_C"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2,
                     C-term; pfam16858"
                     /db_xref="CDD:465283"
     CDS             1..696
                     /gene="LOC107908526"
                     /coded_by="XM_016835708.2:256..2346"
                     /db_xref="GeneID:107908526"
ORIGIN      
        1 mknmpghqkq pqngeaggge igkfhglqpe rdleanwevd lakkledyll kicsgeitgs
       61 qdddghspvn faeaalllqg svqvysrkve ylynlvlhal eflsqkrqqd qpngesvqae
      121 esasraspde dhdkfwdldd ipveakisld sstnndtlvn hfvkppanlv vlegdcldts
      181 gdgselesyl latndlyqdf illdpydaaa vddylngdda gkgeygtnkg ssrrksfqsp
      241 twrsggtahk sshrknkdtn anqsprvdcd fgvndcniga vpsatddfgn vdhgcdmddr
      301 ysnprdldds ddddddndpw kplnphepgn lkvrpfrkvk asrkngvnst kittlfplar
      361 lrgtispelt emwerrqnai ekqreskspp lyeklrqslt gqgtgvanif anfeednedn
      421 gyhdenadfg gpdfdepenm pmdedlpfkn ekhengdael gknemfdngd pcsqasledl
      481 crshldalla siaenekqte laarvsswkq kiehnleeqd shppfdihey gerildklsl
      541 eadkdvmpfg dlvkgqekhd varsfsallq lvnngdvgle rtglcgesvc ytaenpfhvq
      601 ilkqdkrsve tqlgipkkrg kspsrkkptk adrnisspek cqsinadsdy gstklssqnc
      661 kasvklgkfs gvrctpegkr rrrsrlvepv dlhsal
//
LOCUS       XP_016690880             558 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pectinesterase/pectinesterase inhibitor 21 [Gossypium
            hirsutum].
ACCESSION   XP_016690880
VERSION     XP_016690880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..558
                     /product="probable pectinesterase/pectinesterase inhibitor
                     21"
                     /calculated_mol_wt=60789
     Region          7..557
                     /region_name="PLN02217"
                     /note="probable pectinesterase/pectinesterase inhibitor"
                     /db_xref="CDD:215130"
     CDS             1..558
                     /gene="LOC107908136"
                     /coded_by="XM_016835391.2:309..1985"
                     /db_xref="GeneID:107908136"
ORIGIN      
        1 mgklpaiigi csvllvamva aiavgvsrak dsdngdakvs tsekaaqsic qttdyrqtce
       61 nslsnanttd pkelikvgfq aaiqeigkvi ansstiqnaa kdpmtrqavd nckelmgyai
      121 ddlkasfnql gafdvsklde yvenlkiwmg gaityeqtcl dgfvnvstet gvkmkallst
      181 sqkltsngla mvtditkiik dlnipgmegv stgrklmaed gfpswvsfkq rqllqqnaad
      241 mkpnvvvakd gsgkfnsine alkevpmknt apfvihikag vyneqvlvak tmtnvvfvgd
      301 gptktvitgr mnfvdgtvtf ktatlavvge rfiaknikie ntagaikhqa valmvqsdrs
      361 ifyncqmdgy qdtlythshr qfyrdctvsg tidfvfgdaa tvlqnckliv nkpldnqqci
      421 vtaqgrterr evsgivlqnc tisgaqdylp vkatskthlg rpwkqysrti imqsqlddiv
      481 tpegwmpwqg tfaldtlwya efknrgpgav qtnrvkwkgi qqindaqake ftagvflrgd
      541 ewitssgvpy iagmvpgv
//
LOCUS       XP_016691195             824 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-CoA dehydrogenase IBR3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016691195
VERSION     XP_016691195.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835706.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691195.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..824
                     /product="probable acyl-CoA dehydrogenase IBR3 isoform X1"
                     /calculated_mol_wt=91455
     Region          1..824
                     /region_name="PLN02876"
                     /note="acyl-CoA dehydrogenase"
                     /db_xref="CDD:215473"
     CDS             1..824
                     /gene="LOC107908524"
                     /coded_by="XM_016835706.2:202..2676"
                     /db_xref="GeneID:107908524"
ORIGIN      
        1 manrtgdlve avqeahkidv kalfgyasan vpgfplspsk fnlsqfghgq snptylmeve
       61 tgsgtvkryv lrkkppgkll qsahaveref qvlkalgdnt nvpvpkvfcl cndptvigta
      121 fyimeylegr ifvdpslpgv pperrqaiyq atakvlaslh sanidaiglg sygrrdnyck
      181 rqierwfkqy lastsegkpe rypkmfelvd wlrknipped asgatgglvh gdfrvdnvvf
      241 hptedrvigi ldwelstign qmcdvayscm pyitqaglgs delvkgfeii gipegiptqa
      301 eflaeycles gkawpvsewk fyvafslfrg asiytgvynr wlmgnasggk raehagrhak
      361 slvdsaldfi skktvlpeqp psvsrgsrqy gtenkaqglp ersgrfvpsk kiqelrnkli
      421 qfmevhiypl enefnklars dlrwtvhpee erlkelakke glwnlwipfd saarakelif
      481 ngsahcthdr llgaglsnle ygylceimgr slwapqifnc gapdtgnmev llrygtkeql
      541 newlvplleg kirsafamte pqvassdatn iecsikrqgd syiingtkww tsgamdprcr
      601 ililmgktdf tapkhkqqsm ilvdiktpgi cvkrpltvfg fddaphghae vsfenvrvpa
      661 knillgegrg feiaqgrlgp grlhhcmrli gtaergmqlm aeralnrktf gkyiaqhgsf
      721 lsdfakcrie leqtrllvle aadqldrlgn kkargtiama kvaapnmalk vldraiqvhg
      781 gagvssdtvl ahlwasartl riadgpdevh lgtiaqlelr rakl
//
LOCUS       XP_016691196             814 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-CoA dehydrogenase IBR3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016691196
VERSION     XP_016691196.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835707.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691196.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..814
                     /product="probable acyl-CoA dehydrogenase IBR3 isoform X2"
                     /calculated_mol_wt=90267
     Region          1..814
                     /region_name="PLN02876"
                     /note="acyl-CoA dehydrogenase"
                     /db_xref="CDD:215473"
     CDS             1..814
                     /gene="LOC107908524"
                     /coded_by="XM_016835707.2:202..2646"
                     /db_xref="GeneID:107908524"
ORIGIN      
        1 manrtgdlve avqeahkidv kalfgyasan vpgfplspsk fnlsqfghgq snptylmeve
       61 tgsgtvkryv lrkkppgkll qsahaveref qvlkalgdnt nvpvpkvfcl cndptvigta
      121 fyimeylegr ifvdpslpgv pperrqaiyq atakvlaslh sanidaiglg sygrrdnyck
      181 rqierwfkqy lastsegkpe rypkmfelvd wlrknipped asgatgglvh gdfrvdnvvf
      241 hptedrvigi ldwelstign qmcdvayscm pyitqaglgs delvkgfeii gipegiptqa
      301 eflaeycles gkawpvsewk fyvafslfrg asiytgvynr wlmgnasggk raehagrhak
      361 slvdsaldfi skktvlpeqp psvsrgsrqy gtenkaqglp ersgrfvpsk kiqelrnkli
      421 qfmevhiypl enefnklars dlrwtvhpee erlkelakke glwnlwipfd saarakelif
      481 ngsahcthdr llgaglsnle ygylceimgr slwapqifnc gapdtgnmel newlvplleg
      541 kirsafamte pqvassdatn iecsikrqgd syiingtkww tsgamdprcr ililmgktdf
      601 tapkhkqqsm ilvdiktpgi cvkrpltvfg fddaphghae vsfenvrvpa knillgegrg
      661 feiaqgrlgp grlhhcmrli gtaergmqlm aeralnrktf gkyiaqhgsf lsdfakcrie
      721 leqtrllvle aadqldrlgn kkargtiama kvaapnmalk vldraiqvhg gagvssdtvl
      781 ahlwasartl riadgpdevh lgtiaqlelr rakl
//
LOCUS       XP_016690974             421 aa            linear   PLN 06-AUG-2024
DEFINITION  exopolygalacturonase [Gossypium hirsutum].
ACCESSION   XP_016690974
VERSION     XP_016690974.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835485.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690974.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..421
                     /product="exopolygalacturonase"
                     /calculated_mol_wt=45403
     Region          33..420
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..421
                     /gene="LOC107908251"
                     /coded_by="XM_016835485.2:72..1337"
                     /db_xref="GeneID:107908251"
ORIGIN      
        1 maafaivmmv clvlihggqc kglfnaaeal hkakdaengd igpdvkafnv ldygakpdgk
       61 tdtsinfrrt feaacnfhgd ammvipegef lmgpvlfsgp csnpslliiq vngivkaqsn
      121 mayyrgggdd tdwitfqaid glivsgrgtf hgqgsqvwgf ndcarksncv rlpatlkfik
      181 vtdaiirgik sidpkgfhim ismsrnfrif svdlqapgds pntdgihmsk sdlvkisktv
      241 iatgddcvsm ihgstnisik kvicgpghgf sigslghydd eadvsgiivk ncslretdng
      301 vriktyktds pskasgiifq dlimtrvrnp iiidqeygnt kysqpskvri sdvhyinirg
      361 tsaskvavdl lcsasnpcqg ihldnvnlqy agppnddmpf ssncrnarva yhgfqspppc
      421 r
//
LOCUS       XP_016691194             206 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L19-1 [Gossypium hirsutum].
ACCESSION   XP_016691194
VERSION     XP_016691194.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835705.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691194.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="60S ribosomal protein L19-1"
                     /calculated_mol_wt=23969
     Region          4..167
                     /region_name="Ribosomal_L19e_E"
                     /note="Ribosomal protein L19e, eukaryotic. L19e is found
                     in the large ribosomal subunit of eukaryotes and archaea.
                     L19e is distinct from the ribosomal subunit L19, which is
                     found in prokaryotes. It consists of two small globular
                     domains connected by an...; cd01417"
                     /db_xref="CDD:238705"
     Site            order(4,8..9,18..24,26,29,38,42,53,55..60,62,64,66..67,
                     69..70,72,74..79,81..89,92,95..97,100..101,103,110,
                     117..118,120..121,124..126,129,131,134..135)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238705"
     Site            28..47
                     /site_type="active"
                     /note="putative translocon docking site [active]"
                     /db_xref="CDD:238705"
     Site            order(112..113,115..119,139..149)
                     /site_type="active"
                     /note="putative intersubunit bridge [active]"
                     /db_xref="CDD:238705"
     CDS             1..206
                     /gene="LOC107908523"
                     /coded_by="XM_016835705.2:152..772"
                     /db_xref="GeneID:107908523"
ORIGIN      
        1 mvslklqkrl aasvlkcgrg kvwldpnein eismansrqn vrklvkdgfi irkptkihsr
       61 srarrmkeak rkgrhsgygk rkgtrearlp tkilwmrrmr vlrrllrkyr eskkidkhmy
      121 hdmymkvkgn vfknkrvlme sihkskaeka rektlsdqfe akraknkasr erkmarreer
      181 laqgpgvkaa paaapqqaeg vkkskk
//
LOCUS       XP_016691193            1090 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase D zeta 1 [Gossypium hirsutum].
ACCESSION   XP_016691193
VERSION     XP_016691193.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835704.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691193.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1090
                     /product="phospholipase D zeta 1"
                     /calculated_mol_wt=123863
     Region          33..1090
                     /region_name="PLN02866"
                     /note="phospholipase D"
                     /db_xref="CDD:215467"
     CDS             1..1090
                     /gene="LOC107908522"
                     /coded_by="XM_016835704.2:163..3435"
                     /db_xref="GeneID:107908522"
ORIGIN      
        1 masdqggsqy yqvqsepltp smmssffsfa pgvapestri fdelpkativ svsrpdagdi
       61 spmllsytie frykhfkwrl lknashvfyl hfalkkrlfi eeihekqeqv kewlqnlgig
      121 dhapilhddd epdddanllh hdesaknrdv pssaalpvir palgrqssms erakvamhky
      181 lnnflgnmdi vnsrevckfl evsklsfsqe ygpklkeeyv mvkhlpkiar nddsdrccac
      241 rwfdccndnw qkvwavlkpg flallgdpfd tklldiivfd vlpasdgnge grvslasevk
      301 ernplrhafk vacgvrsirl raksssrvkd wvaaindagl rppegwcyph rfgsfapprg
      361 ltedgseaqw fvdggaafna iasaiedaks eifmcgwwlc pelylrrpfr ehaasrldal
      421 leakakegvq iyillykeva lalkinsvys kqkllsihen vrvlrypdhf sagvylwshh
      481 eklvivdnqi cflggldlcf grydtfehkv sdnppviwpg kdyynprese pnswedtmkd
      541 eldrgkyprm pwhdvhcalr gppcrdiarh fvqrwnyakr nkapneiaip llmpqqhmvi
      601 phymgrskei dqegykghrq dsfssisslq diplllpqea dctevpksns pdptpsksgc
      661 fafrkskiep avadtpmkgf vddsldfnme kpldikrqpg skltdpewwe iqersdqvgf
      721 ldetgqvgpr tsircqvirs vsqwsagtsq ieesihcayc sliqkaehfv yienqffisg
      781 lsgdenirnr vlealyrril raysenkcfr viiiipllpg fqgglddaga asvraimhwq
      841 yrtirrghns ilhnlhdrlg pkthdyisfy glrsygelfd ggpvatsqvy vhskimiidd
      901 saaiigsani ndrsllgcrd seiglliedk elvdsrmggn pwkagkfsls lrlslwsehl
      961 glrkgevnqi vdpisdssyk diwvatammn ttiyqeifsc lptdlihsrg alrqiikerl
     1021 thntidlgia petlesyqig eieieknvpl drlkairghl vcfpmdfmck edlrpvfnes
     1081 eyyaspqvfh
//
LOCUS       XP_016691191             377 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 34 [Gossypium hirsutum].
ACCESSION   XP_016691191
VERSION     XP_016691191.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835702.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..377
                     /product="probable protein phosphatase 2C 34"
                     /calculated_mol_wt=41445
     Region          62..354
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(72,76..77,98..100,299,345)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..377
                     /gene="LOC107908521"
                     /coded_by="XM_016835702.2:227..1360"
                     /db_xref="GeneID:107908521"
ORIGIN      
        1 mvllpslfdg largvsmkkg knqnnetdgg reaaesmakd akknemmlcs sgtvnsnksn
       61 dfasicskrg qkgtnqdsai vwekfgcqed mifcgifdgh gpwghivakr vkksvpasll
      121 cnwqkalslt slphqldtef nstfhhfdiw kqsylktyad vdlelkhhpg idafrsgtta
      181 ltiikqgehl vianvgdsra vlattsddgk lvplqltvdf kpnipeeaer ilqcngrvfc
      241 lrdepgvyrv wtpngdtpgl alsraigdhc vkefglisvp dvtqrniinn dqfvilatdg
      301 vwdvisneaa vemvsstedr eksakklvqc amrawkykkr giamddisai clffhpklsq
      361 qvnfvkasap akmaklg
//
LOCUS       XP_016691192             377 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 34 [Gossypium hirsutum].
ACCESSION   XP_016691192
VERSION     XP_016691192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835703.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..377
                     /product="probable protein phosphatase 2C 34"
                     /calculated_mol_wt=41445
     Region          62..354
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(72,76..77,98..100,299,345)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..377
                     /gene="LOC107908521"
                     /coded_by="XM_016835703.2:425..1558"
                     /db_xref="GeneID:107908521"
ORIGIN      
        1 mvllpslfdg largvsmkkg knqnnetdgg reaaesmakd akknemmlcs sgtvnsnksn
       61 dfasicskrg qkgtnqdsai vwekfgcqed mifcgifdgh gpwghivakr vkksvpasll
      121 cnwqkalslt slphqldtef nstfhhfdiw kqsylktyad vdlelkhhpg idafrsgtta
      181 ltiikqgehl vianvgdsra vlattsddgk lvplqltvdf kpnipeeaer ilqcngrvfc
      241 lrdepgvyrv wtpngdtpgl alsraigdhc vkefglisvp dvtqrniinn dqfvilatdg
      301 vwdvisneaa vemvsstedr eksakklvqc amrawkykkr giamddisai clffhpklsq
      361 qvnfvkasap akmaklg
//
LOCUS       XP_016691190             300 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat extensin-like protein 5 [Gossypium hirsutum].
ACCESSION   XP_016691190
VERSION     XP_016691190.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835701.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..300
                     /product="leucine-rich repeat extensin-like protein 5"
                     /calculated_mol_wt=32990
     Region          8..67
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(13..15,18)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     CDS             1..300
                     /gene="LOC107908520"
                     /coded_by="XM_016835701.2:116..1018"
                     /db_xref="GeneID:107908520"
ORIGIN      
        1 mekprvtefq vrmdcngcvq kikkalhgih giyevypdia qqkltvigwa dperiikair
       61 ktrksvtics yseptetaeq ppeqppddgs aapetenptp peappsaeaa asqpeaaapt
      121 adqqrdqpvp ppenpqpepa papapdanan agqqqpphlg pkdvgevhvi chhppdyghr
      181 fgyvhsyggp cnrqfpnsqc nfypnsqpfh helppqpafv thsyntykps pyvteyeyvp
      241 sppryshysh fsridhhned yygnysngss ssnynnsngn gngnitsifs denpnacaim
//
LOCUS       XP_016691189             222 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 3 subunit J [Gossypium
            hirsutum].
ACCESSION   XP_016691189
VERSION     XP_016691189.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835700.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="eukaryotic translation initiation factor 3
                     subunit J"
                     /calculated_mol_wt=25021
     Region          1..222
                     /region_name="eIF3_subunit"
                     /note="Translation initiation factor eIF3 subunit;
                     pfam08597"
                     /db_xref="CDD:462530"
     CDS             1..222
                     /gene="LOC107908519"
                     /coded_by="XM_016835700.2:220..888"
                     /db_xref="GeneID:107908519"
ORIGIN      
        1 medwedeipp lpakeqlksk wddediddsd ikeswedede papppqpvak apeekapkka
       61 askatekkgk avevakeepl dpvaeklrqq rlveeadyks ttelfskkgd dktldnfipk
      121 sesdfveyae lishklrpye ksyhyiallk avmrlsltsl kaadvkdias svtaianekl
      181 kaekeattkk ktvgkkkqlh vdkpdddlvv tayddiddyd fm
//
LOCUS       XP_016690879             159 aa            linear   PLN 06-AUG-2024
DEFINITION  major strawberry allergen Fra a 1.05 [Gossypium hirsutum].
ACCESSION   XP_016690879
VERSION     XP_016690879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="major strawberry allergen Fra a 1.05"
                     /calculated_mol_wt=17469
     Region          4..152
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,133..134,136..137,
                     140..141,143..145)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..159
                     /gene="LOC107908135"
                     /coded_by="XM_016835390.2:231..710"
                     /db_xref="GeneID:107908135"
ORIGIN      
        1 mgvftyesei vtaippakmf kacildgdtl ipqilpqafk sveyiegnge agsikkvtfg
       61 egsqfkyvkq kveavdkdkf vyiysviegd almdklekis yetkletspd ggsvckttsk
      121 yytigefelk eegikagkek algmfkaiea yllanpnty
//
LOCUS       XP_016691188             161 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru ar 1 [Gossypium hirsutum].
ACCESSION   XP_016691188
VERSION     XP_016691188.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835699.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="major allergen Pru ar 1"
                     /calculated_mol_wt=17252
     Region          4..154
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,136..137,139..140,
                     143..144,146..148)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..161
                     /gene="LOC107908518"
                     /coded_by="XM_016835699.2:199..684"
                     /db_xref="GeneID:107908518"
ORIGIN      
        1 mgvftkeaev stplppakaf kafavdienl mpkvapqtvk sievlegngg pgtirkitfa
       61 eghglshakh kvdvldkdnl vyaytvmesd ffnkkiekis ydikfvaaad ggstvkvaat
      121 fytagdtevt pdlmaqikea sekralvmka iesyilanpd a
//
LOCUS       XP_016690878             160 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru ar 1 [Gossypium hirsutum].
ACCESSION   XP_016690878
VERSION     XP_016690878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835389.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..160
                     /product="major allergen Pru ar 1"
                     /calculated_mol_wt=17643
     Region          4..153
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,133..134,136..137,
                     140..141,143,145..146)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..160
                     /gene="LOC107908134"
                     /coded_by="XM_016835389.2:38..520"
                     /db_xref="GeneID:107908134"
ORIGIN      
        1 mgvftyesei vtaippakmf kacildgdtl ipkivpqvfn sveylevnge pgslrkvtfa
       61 qgnqfnymkq kvealdtekf eyiysviegd plmnmldkit yeikledspg ggsicktssk
      121 yytigdielk eeaikagkek asgvlfksie aylvanpnay
//
LOCUS       XP_016690876             160 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru ar 1 [Gossypium hirsutum].
ACCESSION   XP_016690876
VERSION     XP_016690876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..160
                     /product="major allergen Pru ar 1"
                     /calculated_mol_wt=17641
     Region          4..153
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,133..134,136..137,
                     140..141,143,145..146)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..160
                     /gene="LOC107908133"
                     /coded_by="XM_016835387.2:28..510"
                     /db_xref="GeneID:107908133"
ORIGIN      
        1 mgvftyesei vtaippakmf kacildgdtl ipkivpqvfk sveylegnge pgsirkvtfa
       61 qgnqfnymkq kvealdtekf eyiysviegd plmnmldkit yeikledspg ggsicktssk
      121 yytigdielk eeaikagkek algvlfksie aylvanpnay
//
LOCUS       XP_016690919             145 aa            linear   PLN 06-AUG-2024
DEFINITION  major strawberry allergen Fra a 1.06 [Gossypium hirsutum].
ACCESSION   XP_016690919
VERSION     XP_016690919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835430.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..145
                     /product="major strawberry allergen Fra a 1.06"
                     /calculated_mol_wt=15835
     Region          4..145
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,133..134,136..137,
                     140..141,143..145)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..145
                     /gene="LOC107908180"
                     /coded_by="XM_016835430.1:1..438"
                     /db_xref="GeneID:107908180"
ORIGIN      
        1 mgvftyesvv itvipptkmf kacildgdtf ipkivsqafk sveyiegnge agsikkvtfg
       61 egsqfkymkq kvkaidkenf vdiysvvegd almnklekit yetkleaspn ggsvckttsk
      121 yytigdfelk edgvkagkdk algif
//
LOCUS       XP_016691187             161 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru ar 1 [Gossypium hirsutum].
ACCESSION   XP_016691187
VERSION     XP_016691187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835698.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="major allergen Pru ar 1"
                     /calculated_mol_wt=17503
     Region          7..155
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,136..137,139..140,
                     143..144,146..148)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..161
                     /gene="LOC107908517"
                     /coded_by="XM_016835698.2:84..569"
                     /db_xref="GeneID:107908517"
ORIGIN      
        1 mggfakeaev stslppakaf kafaedldtl lpkvapqaik sverlegdgg pgtikkitfa
       61 egygfsyakh rvdvldkdnl lytyvviesd ffnnmvekis yetkfvaaad ggtsikvntt
      121 fytigdiqit pdlmlqikea sekralilka ienyvlanpd v
//
LOCUS       XP_016691183             138 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691183
VERSION     XP_016691183.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835694.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691183.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..138
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14659
     CDS             1..138
                     /gene="LOC107908514"
                     /coded_by="XM_016835694.2:89..505"
                     /db_xref="GeneID:107908514"
ORIGIN      
        1 minffentvm amqtgvglsk ililagagyt gtvllkngkl sdilgelqsl vkgleksgeq
       61 addsdallaq vrrlstesrq lasarqitvl ngdsggirtl fnqhkkveke ikemakkvnd
      121 lcgtevssfk ckmvaggv
//
LOCUS       XP_040944140             116 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944140
VERSION     XP_040944140.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088206.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..116
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12579
     CDS             1..116
                     /gene="LOC107908514"
                     /coded_by="XM_041088206.1:93..443"
                     /db_xref="GeneID:107908514"
ORIGIN      
        1 minffentvm amqtgvglsk ililagagyt gtvllkngkl sdilgelqsl vkgleksgeq
       61 addsdallaq atgistadnc sewgfwryfl nyiclnsssf rriyvkpvyn cingir
//
LOCUS       XP_040944141             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944141
VERSION     XP_040944141.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088207.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..111
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11629
     CDS             1..111
                     /gene="LOC107908514"
                     /coded_by="XM_041088207.1:88..423"
                     /db_xref="GeneID:107908514"
ORIGIN      
        1 minffentvm amqtgvglsk ililagagyt gtvllkngkl sdilgelqsl vkgleksgeq
       61 addsdallaq vrrlstesrq lasarqitvl ngdsggkvci qthpakktki t
//
LOCUS       XP_040944142             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944142
VERSION     XP_040944142.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088208.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..111
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11629
     CDS             1..111
                     /gene="LOC107908514"
                     /coded_by="XM_041088208.1:88..423"
                     /db_xref="GeneID:107908514"
ORIGIN      
        1 minffentvm amqtgvglsk ililagagyt gtvllkngkl sdilgelqsl vkgleksgeq
       61 addsdallaq vrrlstesrq lasarqitvl ngdsggkvci qthpakktki t
//
LOCUS       XP_040944143             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944143
VERSION     XP_040944143.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088209.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..111
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11629
     CDS             1..111
                     /gene="LOC107908514"
                     /coded_by="XM_041088209.1:88..423"
                     /db_xref="GeneID:107908514"
ORIGIN      
        1 minffentvm amqtgvglsk ililagagyt gtvllkngkl sdilgelqsl vkgleksgeq
       61 addsdallaq vrrlstesrq lasarqitvl ngdsggkvci qthpakktki t
//
LOCUS       XP_016691181             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691181
VERSION     XP_016691181.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835692.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691181.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..111
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=11916
     CDS             1..111
                     /gene="LOC107908514"
                     /coded_by="XM_016835692.2:90..425"
                     /db_xref="GeneID:107908514"
ORIGIN      
        1 minffentvm amqtgvglsk ililagagyt gtvllkngkl sdilgelqsl vkgleksgeq
       61 addsdallaq atgistadnc sewgfwrksm ysntpgqkdq nhlefmshml e
//
LOCUS       XP_016691175             159 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru av 1 [Gossypium hirsutum].
ACCESSION   XP_016691175
VERSION     XP_016691175.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835686.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="major allergen Pru av 1"
                     /calculated_mol_wt=17441
     Region          4..152
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,133..134,136..137,
                     140..141,143..145)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..159
                     /gene="LOC107908511"
                     /coded_by="XM_016835686.2:38..517"
                     /db_xref="GeneID:107908511"
ORIGIN      
        1 mgvftyesqv vtaippakmf kacvldgdnl ipkilpqafk sieyiegnge pgsikkvtfg
       61 egsqfkymkq kveavdkenf vyiysviegd afmnklekit yetkleaspg ggslcktssk
      121 yytvgefelk eegikagkek algmfkaiea yllanpday
//
LOCUS       XP_016691174             161 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru ar 1 [Gossypium hirsutum].
ACCESSION   XP_016691174
VERSION     XP_016691174.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835685.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="major allergen Pru ar 1"
                     /calculated_mol_wt=17503
     Region          7..155
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,136..137,139..140,
                     143..144,146..148)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..161
                     /gene="LOC107908510"
                     /coded_by="XM_016835685.2:77..562"
                     /db_xref="GeneID:107908510"
ORIGIN      
        1 mggfakeaev stslppakaf kafaedldtl lpkvapqaik sverlegdgg pgtikkitfa
       61 egygfsyakh rvdvldkdnl lytyvviesd ffnnmvekis yetkfvaaad ggtsikvntt
      121 fytigdiqit pdlmlqikea sekralilka ienyvlanpd v
//
LOCUS       XP_016691173             224 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DEHYDRATION-INDUCED 19 homolog 4 [Gossypium hirsutum].
ACCESSION   XP_016691173
VERSION     XP_016691173.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835684.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="protein DEHYDRATION-INDUCED 19 homolog 4"
                     /calculated_mol_wt=25053
     Region          44..97
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     Region          117..219
                     /region_name="Di19_C"
                     /note="Stress-induced protein Di19, C-terminal; pfam14571"
                     /db_xref="CDD:434045"
     CDS             1..224
                     /gene="LOC107908509"
                     /coded_by="XM_016835684.2:267..941"
                     /db_xref="GeneID:107908509"
ORIGIN      
        1 mesnswrfrf snssssssrr hqsrsdlflg ggyeefdgde dfkaeflcpf caedfdivgl
       61 cchideehpv evkngvcpvc akrvgmdivs hitmqhgnfl kvqrkrrlrk ggsnltfsml
      121 rkeprdgnlh allggsscfv spsnveadpl lssfmfnppt adeplslqsl siaessadke
      181 stdkeslerk pqqsqlsdqe heekarrcef vrgllmstil nenl
//
LOCUS       XP_016691172             655 aa            linear   PLN 06-AUG-2024
DEFINITION  COBRA-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016691172
VERSION     XP_016691172.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835683.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..655
                     /product="COBRA-like protein 7"
                     /calculated_mol_wt=71904
     Region          228..407
                     /region_name="COBRA"
                     /note="COBRA-like protein; pfam04833"
                     /db_xref="CDD:461450"
     CDS             1..655
                     /gene="LOC107908508"
                     /coded_by="XM_016835683.2:248..2215"
                     /db_xref="GeneID:107908508"
ORIGIN      
        1 malnqsydlf fifnlsllfs llpfsfsqtv adapspaadt cngiflsyay tsgtklkptd
       61 pkhqpyrfes vltvlnngde klkswrafvg fkndeylvsa snavladgts lpanvgngtv
      121 fagypmtdlk taieiagdln qiqvqvkllg tqfgvaapsv plpetihlan dgflcpkpsl
      181 qgksemqvcc tkdpkfktnv tvedeflprq sgdltimydv trtydsnywa qvtisnhnpl
      241 grldnwklsf dwmrdefiyt mkgaypyvvd ssdcifgpqg qhyrdldfgn vlncerrpti
      301 idlpltkand ttmgmipkcc rngtilpptm dpsksssvfq mqvfkmppdl nrselsppqn
      361 wkingtlnpn ykcgppvrvs psqfpdpsgl psnttvvasw qvvcnitrpk naspkccvsf
      421 sayfnesvvp cptcacgcpr nsantcrana tavlvppeal lvpfenrtai trawadlkhf
      481 tvpnpmpcgd ncgvsinwhl ysdfsrgwsa ritifnwdet afpdwfaavq lnkatpgfqk
      541 mysfngtale lngvnntifm qglpglnyiv aetdaanpqk dprvpgkqqt visftkkttp
      601 siniaagdgf pskvffngee calpsmlptn sgnrkgsttv isiliavlvf mlvqq
//
LOCUS       XP_016691171             156 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 15 [Gossypium hirsutum].
ACCESSION   XP_016691171
VERSION     XP_016691171.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835682.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..156
                     /product="GATA transcription factor 15"
                     /calculated_mol_wt=16841
     Region          38..72
                     /region_name="GATA"
                     /note="GATA zinc finger; pfam00320"
                     /db_xref="CDD:425605"
     Site            order(38,41,60,63)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(47..48,50,60..70)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..156
                     /gene="LOC107908507"
                     /coded_by="XM_016835682.2:411..881"
                     /db_xref="GeneID:107908507"
ORIGIN      
        1 mldpsekgss sedqtkkspe wispkgspnq sietkkvcad cgtsktplwr ggpagpkslc
       61 nacgirsrkk rrailglnkg edkkskkgni ngnnynrkss ssstknlgdn lkqrllslgk
      121 evlmqrskve kqrsklgeee qaavllmals ygsvya
//
LOCUS       XP_040944144             528 aa            linear   PLN 06-AUG-2024
DEFINITION  importin subunit alpha-2 [Gossypium hirsutum].
ACCESSION   XP_040944144
VERSION     XP_040944144.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088210.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..528
                     /product="importin subunit alpha-2"
                     /calculated_mol_wt=58070
     Region          10..513
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          74..99
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          111..143
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(134,138,142,176,180,184,219,223,227)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          151..187
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          193..227
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          244..269
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(260,264,268,302,306,310,345,349,353)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          277..313
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          319..354
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          362..398
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          405..439
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..528
                     /gene="LOC107908506"
                     /coded_by="XM_041088210.1:159..1745"
                     /db_xref="GeneID:107908506"
ORIGIN      
        1 mslrpstrte vrrnrykvav daeegrrrre dnmveirksk reeslqkkrr eglqaqqlsa
       61 slqssnvekk leslpsmvag vwssngsaql eattqfrkll siersppide viqsgvvprf
      121 veflmredyp qlqfeaawal tniasgtseh tkvvidhgav pifvkllgsp sddvreqavw
      181 algnvagdsp rcrdlvlshg almpllaqln ehsklsmlrn atwtlsnfcr gkpqppfdqv
      241 rpalpalerl ihsndeevlt dacwalsyls dgtndkiqav ieagvcprlv elllnpspsv
      301 lipalrtvgn ivtgddlqtq ciidhgalsc llsllthnhk ksikkeacwt isnitagnke
      361 qiqavinagi igplvsllqn aefdikkeaa waisnatsgg theqikylvs egcikplcdl
      421 lacpdpriit vcleglenil kvgeaekaag agefnycaql iedaegleki enlqshdnne
      481 iyekavkile tywleedeet lppgdgtqqn fhfggndvkv ptggfnfs
//
LOCUS       XP_016690875             566 aa            linear   PLN 06-AUG-2024
DEFINITION  acetate/butyrate--CoA ligase AAE7, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_016690875
VERSION     XP_016690875.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690875.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..566
                     /product="acetate/butyrate--CoA ligase AAE7, peroxisomal"
                     /calculated_mol_wt=62077
     Region          4..566
                     /region_name="PLN02479"
                     /note="acetate-CoA ligase"
                     /db_xref="CDD:178097"
     CDS             1..566
                     /gene="LOC107908127"
                     /coded_by="XM_016835386.2:20..1720"
                     /db_xref="GeneID:107908127"
ORIGIN      
        1 mdireiddlp knaanyaplt plwfleraat vhptriamvh gsrsytwlqt yhrcrrlasa
       61 lckhsmgags ivaviapnip atyeahfgip mtgavinpvn irlnastiaf llghsqssiv
      121 ivdqefftla qnslkimkek sqghfnppll lvvadencdp ealryalgqg aieyerfles
      181 gdpdfawkap qdewqsislg ytsgttaspk gvvlhhrgay lmslsnplvw gmnegvvylw
      241 tlpmfhcngg cftwalaalc gtniclrqvt akgvysaivk hgvthfcaap vvlntivnap
      301 sedtilplph vvhvmtagaa pppalllels rkgfrvlhty glsetygpst ictrkpewds
      361 llpetqarln arqgvrsitl erldvintkt gepvpadgkt vgeivmrgnv vmkgylknak
      421 aneeafadgw fhsedlgvkh qdgyieikdr skdiiisgge nvssvevens lyfhpavlea
      481 svvaraderw gespcafvtl kpeidksdeq rlaediikfc ksrrpaywvp ksvvfgplpk
      541 tatgkiqkhv lrtkakqlgp vklskl
//
LOCUS       XP_040944145             566 aa            linear   PLN 06-AUG-2024
DEFINITION  acetate/butyrate--CoA ligase AAE7, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_040944145
VERSION     XP_040944145.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088211.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..566
                     /product="acetate/butyrate--CoA ligase AAE7, peroxisomal"
                     /calculated_mol_wt=61772
     Region          1..566
                     /region_name="PLN02479"
                     /note="acetate-CoA ligase"
                     /db_xref="CDD:178097"
     CDS             1..566
                     /gene="LOC121214488"
                     /coded_by="XM_041088211.1:169..1869"
                     /db_xref="GeneID:121214488"
ORIGIN      
        1 mairdiddlp knaanytalt plwfleraat vhpsrkavvh gsrtytwlqt yqrcrrlasa
       61 lakrsvgags tvaviapnip atyeahfgip mcgavinpvn irlnastiaf llghsqsatv
      121 ivdqefftla edslkimkek sqghfnppll vvvadeacdp ealryalgqg aieyekfles
      181 gdpdfawkpp qdewksialg ytsgttaspk gvvlhhrgay lmslcnplvw gmnegaiylw
      241 tlpmfhcngw cftwalaalc gtniclrqvt akgvysaiek hgvthfcaap vvlntivnaa
      301 pedtilalph vvhvmtagaa pppavlfams rkgfrvthty glsetygpst icawkpewds
      361 lppdtqarln arqgvryttl ecldvistkt gepvpadgks mgeivmrgnv vmkgylknpk
      421 aneetfangw fhsgdlgvkh qdgyieikdr skdiiisgge nissvevens lylhpavlea
      481 svvaradeqw gespcafvtl kpevnksdeq wlaedimkfc kskmpaywvp ksvvfgplpk
      541 tatgkiqkhv lrgkaqqlgp vkvckl
//
LOCUS       XP_016691168             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691168
VERSION     XP_016691168.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835679.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691168.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..127
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14215
     Region          <41..>71
                     /region_name="LMF1"
                     /note="Lipase maturation factor; pfam06762"
                     /db_xref="CDD:462004"
     CDS             1..127
                     /gene="LOC107908503"
                     /coded_by="XM_016835679.2:448..831"
                     /db_xref="GeneID:107908503"
ORIGIN      
        1 mfifphlhvl tvcsckrdlq nslsdipleg sipgihrsfq idiavpfptl ylsplrrvpf
       61 aaqillqvti idplpnaidk tsgihrnqrt kvsqeqekqr llpvatdkkc arvadscikf
      121 tlrdikc
//
LOCUS       XP_040944146             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944146
VERSION     XP_040944146.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088212.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..127
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14215
     Region          <41..>71
                     /region_name="LMF1"
                     /note="Lipase maturation factor; pfam06762"
                     /db_xref="CDD:462004"
     CDS             1..127
                     /gene="LOC107908503"
                     /coded_by="XM_041088212.1:410..793"
                     /db_xref="GeneID:107908503"
ORIGIN      
        1 mfifphlhvl tvcsckrdlq nslsdipleg sipgihrsfq idiavpfptl ylsplrrvpf
       61 aaqillqvti idplpnaidk tsgihrnqrt kvsqeqekqr llpvatdkkc arvadscikf
      121 tlrdikc
//
LOCUS       XP_040944147             910 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-binding transcription activator 5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944147
VERSION     XP_040944147.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088213.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..910
                     /product="calmodulin-binding transcription activator 5
                     isoform X1"
                     /calculated_mol_wt=102585
     Region          29..146
                     /region_name="CG-1"
                     /note="CG-1 domain; cl04295"
                     /db_xref="CDD:470995"
     Region          530..559
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <532..653
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          562..592
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(563,567..568,571..573,574..575,579,582,592,594,596,
                     600..601,604..606,608..609,613,616,631,633,635,639..640,
                     643..645,647..648,652)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          594..631
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          781..802
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     CDS             1..910
                     /gene="LOC107908502"
                     /coded_by="XM_041088213.1:164..2896"
                     /db_xref="GeneID:107908502"
ORIGIN      
        1 medggcarlv gaeihgfhtl qdldvknmme eaksrwlrpn eihailcshr yfsiqakpvn
       61 mpksgtivlf drkmlrnfrk dgynwkkkkd gktikeaheh lkvgdkerih vyyahgedns
      121 tfvrrcywll dksleqivlv hyretkevsl athsnssslt dqstpllvte efdsgianty
      181 seepgesvnv rnhemkllei ntlewdellv angandsias rgdnvscfdq qnqmavndfs
      241 nygglisahn lstetsllvn siapvaqsnn aylgttggvc nqisggqvnt tsqlkdscal
      301 gigdsldflv ndglqsqdsf gkwindfite plgsvgdsvl dlssandsft apeqifsite
      361 vspgwayste ktkilvtgvf hqayqhlaks tlfcvcgdlc tpaeivqvgv yrcllsqhsp
      421 glvnlymsld ghkpisqvlg feyctplshd pifptedesr qeefqlqmrl ayllfstsks
      481 ldillgnkvs pnilkgvkkf aqkttnmsdc wkylmksfee nrvsstqakd slleialknr
      541 lrdwllerii eggktnehdt qgqgvlhlca ilgytwamyl yswsglsldf rdkhgwtalh
      601 waafygrekm vavllsagak pnlvtdpttr npngytaadl aslkgyegla aylseealva
      661 hfndmavagn asgslqtsrt eatnfenlne delylkesla ayrtaadaas riqtafrvhs
      721 lklqtkaies shpedetrni vaamkiqhaf rnyeikkkmt aaarikysfl twkmrkdfln
      781 mrrqaikiqa vfrgfqvrrq yhkilwsvgv lekailrwrf krkglrglqi ntaeevaqrs
      841 qesdteegff rdcrkqaeer vvkavvrvqt lfrskkaqqe yrrmklahdm akleyenlrg
      901 lpsdmdacrh
//
LOCUS       XP_016691167             804 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-binding transcription activator 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016691167
VERSION     XP_016691167.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835678.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691167.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..804
                     /product="calmodulin-binding transcription activator 5
                     isoform X2"
                     /calculated_mol_wt=89991
     Region          33..145
                     /region_name="CG-1"
                     /note="CG-1 domain; pfam03859"
                     /db_xref="CDD:461077"
     Region          530..559
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <532..653
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          562..592
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(563,567..568,571..573,574..575,579,582,592,594,596,
                     600..601,604..606,608..609,613,616,631,633,635,639..640,
                     643..645,647..648,652)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          594..631
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..804
                     /gene="LOC107908502"
                     /coded_by="XM_016835678.2:164..2578"
                     /db_xref="GeneID:107908502"
ORIGIN      
        1 medggcarlv gaeihgfhtl qdldvknmme eaksrwlrpn eihailcshr yfsiqakpvn
       61 mpksgtivlf drkmlrnfrk dgynwkkkkd gktikeaheh lkvgdkerih vyyahgedns
      121 tfvrrcywll dksleqivlv hyretkevsl athsnssslt dqstpllvte efdsgianty
      181 seepgesvnv rnhemkllei ntlewdellv angandsias rgdnvscfdq qnqmavndfs
      241 nygglisahn lstetsllvn siapvaqsnn aylgttggvc nqisggqvnt tsqlkdscal
      301 gigdsldflv ndglqsqdsf gkwindfite plgsvgdsvl dlssandsft apeqifsite
      361 vspgwayste ktkilvtgvf hqayqhlaks tlfcvcgdlc tpaeivqvgv yrcllsqhsp
      421 glvnlymsld ghkpisqvlg feyctplshd pifptedesr qeefqlqmrl ayllfstsks
      481 ldillgnkvs pnilkgvkkf aqkttnmsdc wkylmksfee nrvsstqakd slleialknr
      541 lrdwllerii eggktnehdt qgqgvlhlca ilgytwamyl yswsglsldf rdkhgwtalh
      601 waafygrekm vavllsagak pnlvtdpttr npngytaadl aslkgyegla aylseealva
      661 hfndmavagn asgslqtsrt eatnfenlne delylkesla ayrtaadaas riqtafrvhs
      721 lklqtkaies shpedetrni vaamkiqhaf rnyeikkkmt aaarikysfl twkmrkdfln
      781 mrrqaikiqi kkdvkmisne ekkr
//
LOCUS       XP_016691165             193 aa            linear   PLN 06-AUG-2024
DEFINITION  GTP-binding protein SAR1A [Gossypium hirsutum].
ACCESSION   XP_016691165
VERSION     XP_016691165.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835676.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="GTP-binding protein SAR1A"
                     /calculated_mol_wt=21943
     Region          2..192
                     /region_name="Sar1"
                     /note="Sar1 is an essential component of COPII vesicle
                     coats; cd00879"
                     /db_xref="CDD:206645"
     Site            2..4
                     /site_type="active"
                     /note="STAR motif [active]"
                     /db_xref="CDD:206645"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206645"
     Site            order(29..35,51,73,129..130,132,174..176)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206645"
     Site            order(29..30,34,38,45..57,79,84)
                     /site_type="other"
                     /note="GAP interaction site [polypeptide binding]"
                     /db_xref="CDD:206645"
     Site            39..54
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206645"
     Site            order(51..55,60,70,74,80,82..84)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206645"
     Site            51
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206645"
     Site            order(52..59,69,80,83..84)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206645"
     Site            55..69
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206645"
     Site            70..87
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206645"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206645"
     Site            129..132
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206645"
     Site            174..176
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206645"
     CDS             1..193
                     /gene="LOC107908501"
                     /coded_by="XM_016835676.2:203..784"
                     /db_xref="GeneID:107908501"
ORIGIN      
        1 mflvdwfygi laslglyqke akilflgldn agkttllhml kderlvqhqp tqyptseels
       61 igmikfkafd lgghqiarrv wkdyyakvda vvylvdaydk erfaeskkel dallsdesla
      121 dvpflilgnk idlpyaased elrfhmgltn fttgkgkvnl egtnvrplev fmcsivrkmg
      181 ygdgfrwlsq yik
//
LOCUS       XP_016691164              61 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L29-2 [Gossypium hirsutum].
ACCESSION   XP_016691164
VERSION     XP_016691164.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835675.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..61
                     /product="60S ribosomal protein L29-2"
                     /calculated_mol_wt=6998
     Region          4..42
                     /region_name="Ribosomal_L29e"
                     /note="Ribosomal L29e protein family; pfam01779"
                     /db_xref="CDD:460324"
     CDS             1..61
                     /gene="LOC107908500"
                     /coded_by="XM_016835675.2:122..307"
                     /db_xref="GeneID:107908500"
ORIGIN      
        1 maksknhtah nqsykahkng ikkpkrqrht stkgmdpkfl rnqryarkhn kkngesaaee
       61 e
//
LOCUS       XP_016691161             459 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691161
VERSION     XP_016691161.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835672.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..459
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49984
     Region          315..396
                     /region_name="PAPA-1"
                     /note="PAPA-1-like conserved region; pfam04795"
                     /db_xref="CDD:461431"
     Region          418..450
                     /region_name="zf-HIT_IN80B"
                     /note="zinc finger HIT (zf-HIT) found in INO80 complex
                     subunit B (INO80B) and similar proteins; cd23021"
                     /db_xref="CDD:467793"
     Site            order(425,441,445)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:467793"
     Site            order(429..435,441..443,446..447)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467793"
     CDS             1..459
                     /gene="LOC107908498"
                     /coded_by="XM_016835672.2:327..1706"
                     /db_xref="GeneID:107908498"
ORIGIN      
        1 mesfggsela vvgcavkkkr sgilrrprva vqtfthnyil lssptpatgc sgnedqnfks
       61 gsngfgsenk lklklklggv trtiqtnstv dhafdvepgl tksshfsdvs qtreksfllg
      121 kkgscvsdkg egyevqwkdl srsgsgygkg hssrgkatgv cvagnetdrh eptrkskrvp
      181 krrvldvgin sddddedeei rylgrlnasn ghlnlkdeed ernggegaaf edrdyveede
      241 cisddepgsk rkklgrgsvd lfvegrtest pttrnralqs gkdllsgpga tlvefpdglp
      301 papskkqkek lsevelqlkk aeaaqrrrmq sekaardaea eairkilgqd sarkkkedkm
      361 kkqrdelaqg katksetlas ntvrwvmgpg gttvifsedi glpqlfnsvp sgyppprekc
      421 agpnctnayk yrdsksklpl csldcykaih akaqpliac
//
LOCUS       XP_016691159             171 aa            linear   PLN 06-AUG-2024
DEFINITION  BAG-associated GRAM protein 1-like [Gossypium hirsutum].
ACCESSION   XP_016691159
VERSION     XP_016691159.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835670.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="BAG-associated GRAM protein 1-like"
                     /calculated_mol_wt=19169
     Region          82..>159
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..171
                     /gene="LOC107908497"
                     /coded_by="XM_016835670.2:453..968"
                     /db_xref="GeneID:107908497"
ORIGIN      
        1 mwslaqsell lfviiskafr lishlsstif igfanwraft nrgmngyaga ntrrrissdk
       61 qgptvvhqkp gplqtifkll pdevvehsys calersflyh grmyvsawhi cfhsnvfskq
      121 mkvvipfgdi deirrsqhaf inpaitiilr mgagghgvpc nnnyfgtgtm h
//
LOCUS       XP_040944149             171 aa            linear   PLN 06-AUG-2024
DEFINITION  BAG-associated GRAM protein 1-like [Gossypium hirsutum].
ACCESSION   XP_040944149
VERSION     XP_040944149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088215.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="BAG-associated GRAM protein 1-like"
                     /calculated_mol_wt=19169
     Region          82..>159
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..171
                     /gene="LOC107908497"
                     /coded_by="XM_041088215.1:385..900"
                     /db_xref="GeneID:107908497"
ORIGIN      
        1 mwslaqsell lfviiskafr lishlsstif igfanwraft nrgmngyaga ntrrrissdk
       61 qgptvvhqkp gplqtifkll pdevvehsys calersflyh grmyvsawhi cfhsnvfskq
      121 mkvvipfgdi deirrsqhaf inpaitiilr mgagghgvpc nnnyfgtgtm h
//
LOCUS       XP_016690874             202 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase inhibitor [Gossypium hirsutum].
ACCESSION   XP_016690874
VERSION     XP_016690874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="pectinesterase inhibitor"
                     /calculated_mol_wt=21369
     Region          48..201
                     /region_name="PMEI-like_2"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitors; cd15800"
                     /db_xref="CDD:275444"
     Site            order(124..125,128,132,149,161,199)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:275444"
     CDS             1..202
                     /gene="LOC107908126"
                     /coded_by="XM_016835385.2:290..898"
                     /db_xref="GeneID:107908126"
ORIGIN      
        1 meltnkktvl vllcfrpvla icvasapita satvpppisq pptavpsdpq ikslcaktey
       61 pdlclttiap ffngktdias vvemlikagt eqtkqanata tkmaadpkya ddpktisglk
      121 gcyemyddal dnmqnamdai pvhdigtiet mvsaaitdyg tcddgftrqp npvpdgvspm
      181 vdinenlqni gsiilaitdl lh
//
LOCUS       XP_040944150              79 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein A-like protein isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944150
VERSION     XP_040944150.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088216.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..79
                     /product="universal stress protein A-like protein isoform
                     X1"
                     /calculated_mol_wt=8580
     Region          <3..76
                     /region_name="USP_At3g01520-like"
                     /note="universal stress protein At3g01520 and similar
                     proteins; cd23659"
                     /db_xref="CDD:467505"
     CDS             1..79
                     /gene="LOC121214492"
                     /coded_by="XM_041088216.1:294..533"
                     /db_xref="GeneID:121214492"
ORIGIN      
        1 mrrarcnsgk asvhvevlmk vywgdprekl ceaidsills ciivgnrglg klkriimgsv
       61 snyvvnngsc avtvvkhhe
//
LOCUS       XP_040944151              74 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS32 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944151
VERSION     XP_040944151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088217.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..74
                     /product="universal stress protein PHOS32 isoform X2"
                     /calculated_mol_wt=8009
     Region          <3..71
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     CDS             1..74
                     /gene="LOC121214492"
                     /coded_by="XM_041088217.1:279..503"
                     /db_xref="GeneID:121214492"
ORIGIN      
        1 mrrarcnsgk asvhvevlmk vywgdprekl ceaidsills ciivgnrglg klksvsnyvv
       61 nngscavtvv khhe
//
LOCUS       XP_016693943             595 aa            linear   PLN 06-AUG-2024
DEFINITION  aldehyde dehydrogenase 22A1 [Gossypium hirsutum].
ACCESSION   XP_016693943
VERSION     XP_016693943.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838454.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693943.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..595
                     /product="aldehyde dehydrogenase 22A1"
                     /calculated_mol_wt=65826
     Region          69..531
                     /region_name="ALDH_F15-22"
                     /note="Aldehyde dehydrogenase family 15A1 and 22A1-like;
                     cd07098"
                     /db_xref="CDD:143416"
     Site            order(195..199,207,222,224..225,274..277,280,283..284,
                     298..300,332,433,435,461,501)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143416"
     Site            order(199,298,329,332)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143416"
     CDS             1..595
                     /gene="LOC107910577"
                     /coded_by="XM_016838454.2:258..2045"
                     /db_xref="GeneID:107910577"
ORIGIN      
        1 mafwwpiivl afayaicrfl lmlippnvps idvdasdvld dgnqtqensf iyipprgrtq
       61 qsdrkvqcye patmkylgff paltpaevee rvtqarkaqk iwakssfkqr rqflrillky
      121 iiehqelice vssrdtgktm vdaslgeimt tcekitwlls egekwlrpey rssgrsmlhk
      181 kskvefhplg vigaivswny pfhnifnpml aavfsgngvv ikvsehasws gcfyfriiqa
      241 alaavgapen lvevitgfae tgealvssvd kiifvgspgv gkmimanaae tlipvtlelg
      301 gkdafivced vdiphvaqva vratlqssgq ncagaerfyv hrdiynsfvn qvtkivksvs
      361 agpplaaryd mgaiclqehs eklqhlvdda vdkgaeivar gsfghlsega vdqffpptvl
      421 knvnhtmklm qeetfgpimp imkfnsdeev vklandsryg lgcavfsgsq rrakeiasqi
      481 hcgvaavndf astymcqslp fggtkdsgfg rfagveglra cclvkavved rwwpyiktki
      541 pkpiqypvae ngfefqeslv ealyglniwd rlralvnvlk iiseqnpvat skknd
//
LOCUS       XP_016693944             234 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP21-4 [Gossypium hirsutum].
ACCESSION   XP_016693944
VERSION     XP_016693944.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838455.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="peptidyl-prolyl cis-trans isomerase CYP21-4"
                     /calculated_mol_wt=26142
     Region          82..227
                     /region_name="cyclophilin"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; cd00317"
                     /db_xref="CDD:238194"
     Site            order(122,124,127..128,130,167..168,177,179,187..188,192)
                     /site_type="active"
                     /db_xref="CDD:238194"
     CDS             1..234
                     /gene="LOC107910578"
                     /coded_by="XM_016838455.2:355..1059"
                     /db_xref="GeneID:107910578"
ORIGIN      
        1 marikpqall tqskkkkgpt risvttilfc slivlsills littykhwsq rsrgqtgtgl
       61 snfenvdeia dskkydlpgy avlntskgni tielfkdgsp eivdkfldlc qkghfkgmpf
      121 hhviknyvil gghsqdsggi edwtskrkfh rrlptspkhe afmlgatkik edskafqlfi
      181 ttapipdsnd klymfgrvik gvdgvqeiee vdtdthyrpk spvgiinvil qqei
//
LOCUS       XP_016693945             234 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP21-4 [Gossypium hirsutum].
ACCESSION   XP_016693945
VERSION     XP_016693945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838456.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="peptidyl-prolyl cis-trans isomerase CYP21-4"
                     /calculated_mol_wt=26142
     Region          82..227
                     /region_name="cyclophilin"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; cd00317"
                     /db_xref="CDD:238194"
     Site            order(122,124,127..128,130,167..168,177,179,187..188,192)
                     /site_type="active"
                     /db_xref="CDD:238194"
     CDS             1..234
                     /gene="LOC107910578"
                     /coded_by="XM_016838456.2:399..1103"
                     /db_xref="GeneID:107910578"
ORIGIN      
        1 marikpqall tqskkkkgpt risvttilfc slivlsills littykhwsq rsrgqtgtgl
       61 snfenvdeia dskkydlpgy avlntskgni tielfkdgsp eivdkfldlc qkghfkgmpf
      121 hhviknyvil gghsqdsggi edwtskrkfh rrlptspkhe afmlgatkik edskafqlfi
      181 ttapipdsnd klymfgrvik gvdgvqeiee vdtdthyrpk spvgiinvil qqei
//
LOCUS       XP_016693942             399 aa            linear   PLN 06-AUG-2024
DEFINITION  probable N-acetyltransferase HLS1-like [Gossypium hirsutum].
ACCESSION   XP_016693942
VERSION     XP_016693942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838453.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="probable N-acetyltransferase HLS1-like"
                     /calculated_mol_wt=45345
     Region          <65..152
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(100..102,112..113)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..399
                     /gene="LOC107910576"
                     /coded_by="XM_016838453.2:133..1332"
                     /db_xref="GeneID:107910576"
ORIGIN      
        1 mgdsigdkvf vrefdddrdi emvgklernc ergsnnkgts iftnmmgdpl crirfyplhl
       61 mlvavlreng elvgvirgci khvgtkfggk niklgcilgl rvspkhrrmg iglklvrame
      121 ewlinneahy tflateknnv astnlfttkc nyrhlsslvi fvqpinfgmd hggasqdikv
      181 eklnidqaic fydhklrgkd idladidail kekqslgtwv syfkqdewig lhskemkned
      241 iistspsswa mfsiwnscea ykihikkysh plkffhetls hardkifpcl kipicnslek
      301 pfgflflygl hgegekveel mksawnfasr laenvkdckv iitelgvsdp lmehvphhss
      361 msriedqwyl kkvngsinde delgmvgelg nvvvdprdf
//
LOCUS       XP_016693941             498 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose transport protein SUC8 [Gossypium hirsutum].
ACCESSION   XP_016693941
VERSION     XP_016693941.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838452.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693941.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..498
                     /product="sucrose transport protein SUC8"
                     /calculated_mol_wt=52462
     Region          11..483
                     /region_name="GPH_sucrose"
                     /note="GPH family sucrose/H+ symporter; TIGR01301"
                     /db_xref="CDD:273545"
     CDS             1..498
                     /gene="LOC107910574"
                     /coded_by="XM_016838452.2:185..1681"
                     /db_xref="GeneID:107910574"
ORIGIN      
        1 metggngppk piwnivmvsa iaagiqfgwa lqlslltpyv qtlgvphvwa afiwlcgpis
       61 gllvqpivgy fsdhctsrig rrrpfiaaga clvavavffv gfakdighra gdsldnptkp
      121 ravavfvtgf wildvannml qgpcraflad lsgsdhkrmr iangwfsffm aignvlgyaa
      181 gsysnlyell pfttttacdv ycanlktcfi idivfllsvt itaittvket plksngslde
      241 geggssepfi geivtafktl kkpmwilllv tclnwiawfp fllydtdwvg vevfggkvng
      301 ssseqklydd gvragalglm insivlafts lglepvsrli ggvknlwgvv nfilaaglag
      361 tvwitkvaea wrgkqgpqil tspptnvksf alavfgllgi plsvtfsipf alasiycada
      421 gggqglslgv lnlsivipqm fvsvisgpld aafgggnlpa fvlgsivaai sallaifalp
      481 hpknqlslns gavvgggh
//
LOCUS       XP_016691043             849 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase ANXUR2 [Gossypium hirsutum].
ACCESSION   XP_016691043
VERSION     XP_016691043.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835554.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691043.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..849
                     /product="receptor-like protein kinase ANXUR2"
                     /calculated_mol_wt=93600
     Region          36..400
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          526..791
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(526..530,534,546,548,577,593..596,600,602,644,646,
                     648..649,651,662,665,683..686)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(526..530,534,546,548,577,593..596,600,644,646,
                     648..649,651,662)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(530,600,602,644,646,648,665,683..686)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(661..668,679..686)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..849
                     /gene="LOC107908376"
                     /coded_by="XM_016835554.2:198..2747"
                     /db_xref="GeneID:107908376"
ORIGIN      
        1 mmksisktll falcycffth flaksnpdst hkgyilscga sedaatdadg rkwgpdakfl
       61 tssrdteaat aqyqdpslpt vvpymtarif kssstsykfp vtpntrhwlr lyfypstyng
      121 ldpftsyfsv vangvtllhn fsgaitakaf tqgyiirefc ltpvgsgdln vtitpakgsy
      181 ayvngielvp mpdifqkpai flgfsdqyle ltsctlqtmf rlnvggqfip pnkdsgltrt
      241 wyddfpylfg sgigvtsrad knlsiqysks vpeviapvdv ystgrtmgps arvnanynlt
      301 wifqvdanft yvvrlhfcey evnkinervf diyinnqtaq spsdiiawvg gqgrpiykdf
      361 aayvsdspgd eemwvqlhpt vsmkpkhlna llngleifkm ndsnmnlagp npvpsqmltd
      421 aeaeaeskrf sesearngpl iaggvaggva scalvvaivv vvvvkkkkkt gkilssvitn
      481 gsshssstgk tfpgsqisnl aaglcrhfsl seikhgtknf desrvigvgg fgnvyrgtid
      541 ggtkvaikrs npsseqgvhe fqteiemlsk lrhrhlvsli gfceeggemi lvydymangt
      601 lrehlyktnk pplpwkqrle icigaarglh ylhtgarhti ihrdvkttni lldekwvakv
      661 sdfglsktgp nleqdhvstm vkgsfgyldp eyfrrqqlte ksdvysfgvv lfevlcarpv
      721 ldaslpkeqv slgdyarice rkgtlheiid phlkgrinpe clrkfteiag kclldhgtdr
      781 psmgdvlwnl efslqleehp ggmlvaenka nnayathtat iaadeaivnd dvdsnrsavf
      841 sqlvdlkgr
//
LOCUS       XP_016693940             224 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase AIP2 [Gossypium hirsutum].
ACCESSION   XP_016693940
VERSION     XP_016693940.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838451.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="E3 ubiquitin-protein ligase AIP2"
                     /calculated_mol_wt=24431
     Region          172..>204
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..224
                     /gene="LOC107910573"
                     /coded_by="XM_016838451.2:61..735"
                     /db_xref="GeneID:107910573"
ORIGIN      
        1 maeefnnfpq myldmnmevp qlkplsssss sssspssavf eievkatfii anelfeeagr
       61 ilsqvihefp lddlindgng avldmlnsmr vpvqqsmvee iattavhlaa aardadgkvl
      121 rmeveieavv nevpdfgsdd mdieddddde gvamevvags vrktvvetae kdcticleel
      181 avggeaarmp cshvfheaci vtwlkkkkcc pccrfdfsnl ksev
//
LOCUS       XP_016693939             737 aa            linear   PLN 06-AUG-2024
DEFINITION  dual specificity protein kinase shkD [Gossypium hirsutum].
ACCESSION   XP_016693939
VERSION     XP_016693939.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838450.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693939.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..737
                     /product="dual specificity protein kinase shkD"
                     /calculated_mol_wt=81576
     Region          106..>212
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          465..711
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(465..469,473,484,486,517,533..536,540,542,582,584,
                     586..587,589,600,603,619..622)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(465..469,473,484,486,517,533..536,540,582,584,
                     586..587,589,600)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(469,540,542,582,584,586,603,619..622)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(599..607,618..622)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..737
                     /gene="LOC107910572"
                     /coded_by="XM_016838450.2:148..2361"
                     /db_xref="GeneID:107910572"
ORIGIN      
        1 metpqgeell rkiqelqvgh ahlmremsrl kqsggesihd strrgssrts pqwplflgda
       61 laaagsgsvr lpsqiesgsc gtsngdgert rtgnswtaaa nltnsqylni lqsmgqsvyi
      121 ydlggrvfyw nraaeklfgy seaealgqdi iklvcqpkyf riaanivhlv tageswaglf
      181 piknrigeni svvttvtpfy deigsvvgit cvtcdsrpfq etkfefsaer qpkgnssafi
      241 rsknaisvkl gldpqqplqa aivskisnla skvsnkvksr irtgenrvdp ydhnedatss
      301 gvctpkgdmr ppthgvlypf hnestvmnsi dfgdenegkp gvqkfttfia ltgislpwkg
      361 nsqeeseakt thsirpcegn dqenetfllk gpylgtkped hinehdrpin ndalgsssss
      421 anvnstssts ssgstggspv nrvhmdtdcv dyeilweelt igeqigqgsc gtvyhglwya
      481 sdvavkvfpn leysdnvihs frqevslmkr lrhpnvllfm gavtspqrlc ivteflqrgs
      541 lfrllqrnaa klerkrrvhm aldiargmny lhhcnptivh rdlkssnllv dknwtvkvgd
      601 fglsrlkhat flttktgkgt pqwmapevlr nepsdeksdi ysfgvilwel atgkipwenl
      661 nsmqvigtvg fmnqrleipk dldplwasii escwlsdprs rptflelmdk lrelqrrcai
      721 qlqqarnsag dcsqkgs
//
LOCUS       XP_016693938             110 aa            linear   PLN 06-AUG-2024
DEFINITION  huntingtin-interacting protein K [Gossypium hirsutum].
ACCESSION   XP_016693938
VERSION     XP_016693938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838449.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..110
                     /product="huntingtin-interacting protein K"
                     /calculated_mol_wt=11826
     Region          69..109
                     /region_name="UBA_HYPK"
                     /note="UBA-like domain found in Huntingtin-interacting
                     protein K (HYPK) and similar proteins; cd14361"
                     /db_xref="CDD:270544"
     CDS             1..110
                     /gene="LOC107910570"
                     /coded_by="XM_016838449.2:189..521"
                     /db_xref="GeneID:107910570"
ORIGIN      
        1 meagdggvda vvdskdlqqq skafdkltdr vedrqldssr aqsamasiaa saeaeknamr
       61 lrerelaavk inaadvdiia nelelnkkva ertlrehkgd avaairsllh
//
LOCUS       XP_040944153             739 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 [Gossypium hirsutum].
ACCESSION   XP_040944153
VERSION     XP_040944153.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088219.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..739
                     /product="serine/threonine-protein kinase STY46"
                     /calculated_mol_wt=81768
     Region          99..>215
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          468..714
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(468..472,476,487,489,520,536..539,543,545,585,587,
                     589..590,592,603,606,622..625)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(468..472,476,487,489,520,536..539,543,585,587,
                     589..590,592,603)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(472,543,545,585,587,589,606,622..625)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(602..610,621..625)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..739
                     /gene="LOC107908051"
                     /coded_by="XM_041088219.1:183..2402"
                     /db_xref="GeneID:107908051"
ORIGIN      
        1 mktplgeell rkiqelevgh aylmremsgl rqssgesihd strrgsrrts pqrplflgda
       61 aaaagsgsvr lplriesgsc gttnggggda grtrtgnsrt aaanltnsqy lnilqsmgqs
      121 vyiydlrgrv ffwnrgaekl ygyleaealg qniiklvchp kdfgfavniv qrviigeswt
      181 glfpiknrlg enisvvatvt pfydedgsvv gitsvtcdsr pfqetkfefs aerqpkgnss
      241 aftrskntis vklgldpqqp lqaaivskis nlaskvsnkv ksrirtgenr vdaydhkeda
      301 tysgvctpkg dmwppshdvl hpfdnvstvm nsidfgdene gkpaiqkftt fiaktgislp
      361 wkgnsqeese aktthsirpc egndqqnetf llkgpylgkk ledhinehds pinneasgfs
      421 sssanvnsts strssgstgg spvnivhmdt dcvdneilwe eltigdklgk gscgtvyhgl
      481 wyasdvavkv fpnleysddv ihsfrqevsl mkrlrhpnvl lfmgavtspq rlcivteflq
      541 rgslfrllqr naaklerkrr vhmaldiaqg mnylhhcnpt ivhrdlkssn llvdknwtvk
      601 vgdfglsrlk hatflttktg kgtphwmape vlrnepsdek sdiysfgvil welatgkipw
      661 enlnsiqvig avgfmnqrle ipnyldplwa siiescwlsd pqsrptflel mdklrvlqrr
      721 ctiqfqearn sssgsqkgs
//
LOCUS       XP_016693937             383 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 42 [Gossypium hirsutum].
ACCESSION   XP_016693937
VERSION     XP_016693937.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838448.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693937.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..383
                     /product="probable protein phosphatase 2C 42"
                     /calculated_mol_wt=42198
     Region          60..360
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(68,72..73,90..92,292,351)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..383
                     /gene="LOC107910569"
                     /coded_by="XM_016838448.2:647..1798"
                     /db_xref="GeneID:107910569"
ORIGIN      
        1 mlwglmnlfs lcwkpfgpdg enhetngvlg ggggttggsr egkdgllwfr digkygsgef
       61 smavvqanqv ledqsqiesg qfgtfvgiyd ghggpeaary vcdhlfsnfr aitaeshgvv
      121 taetiqrafr qteegfttlv selwgsrpsm atvgtcclvg viyqqtlfia slgdsrvvlg
      181 kkvgntggma amqlstehna nieairhelk elhpndpqiv vlkhgvwrvk giiqvsrsig
      241 dlymkhaqyn repinakfrl pepmnmplls anptiishpl hpsdsflifa sdglwehlsn
      301 ekavdivhsh pragsakrlv kaalqeaark remrysdlrk idkkvrrhfh dditvivlff
      361 nhdlisrgav qdppvsirsa leh
//
LOCUS       XP_016691042             107 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691042
VERSION     XP_016691042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835553.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..107
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11550
     CDS             1..107
                     /gene="LOC107908374"
                     /coded_by="XM_016835553.2:67..390"
                     /db_xref="GeneID:107908374"
ORIGIN      
        1 mimknsvmif falvlllasp eadgqrpenr pepkllsndq latssrlgrk advgsaatas
       61 lvaapdqedn dnnpgyehyg sntdphnlvh hsyingtnpy pkhkksp
//
LOCUS       XP_016691041             221 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691041
VERSION     XP_016691041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835552.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24733
     CDS             1..221
                     /gene="LOC107908373"
                     /coded_by="XM_016835552.2:57..722"
                     /db_xref="GeneID:107908373"
ORIGIN      
        1 mkekenqtpr kehrrsldla nrrsndspak ktskkiaqks lieafispie ddlpnisees
       61 idfssisavs danfnfette siaitsnpll ssssetfiss eigpyskisa anrdepidfs
      121 mtglaeveif ldllkqarfq alnsahlenk skkvldalie ftikefytmp qeidklqeiv
      181 srnahvrflc lltwvvavsl fslylfcysr pvcsftgppp t
//
LOCUS       XP_040944154             220 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH148 [Gossypium hirsutum].
ACCESSION   XP_040944154
VERSION     XP_040944154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088220.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="transcription factor bHLH148"
                     /calculated_mol_wt=23854
     Region          139..194
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(139..140,143..144,146..147,151,168..169)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381450"
     Site            order(149..150,153,156..157,160,169..170,173..174,177,180,
                     183..184,187,190..191,193..194)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..220
                     /gene="LOC121203166"
                     /coded_by="XM_041088220.1:397..1059"
                     /db_xref="GeneID:121203166"
ORIGIN      
        1 maslitnpvt ntnsdrskrk kkknsmvkqn lqrsqkedha rwkseaqqqi ysskllqals
       61 qvslgtpsps aprggravre aadrvlavaa kgrtrwsrai ltsrlklkfr kqkrsqrgsa
      121 aavaaatrts rskkprvsvl klkaksvpnv qrkvkvlgrl vpgcrkqplp vileeatdyi
      181 aalemqvram saladllsgs gaassssapp pewpmpptsq
//
LOCUS       XP_040944155             220 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH148 [Gossypium hirsutum].
ACCESSION   XP_040944155
VERSION     XP_040944155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088221.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="transcription factor bHLH148"
                     /calculated_mol_wt=23854
     Region          139..194
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(139..140,143..144,146..147,151,168..169)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381450"
     Site            order(149..150,153,156..157,160,169..170,173..174,177,180,
                     183..184,187,190..191,193..194)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..220
                     /gene="LOC121203166"
                     /coded_by="XM_041088221.1:289..951"
                     /db_xref="GeneID:121203166"
ORIGIN      
        1 maslitnpvt ntnsdrskrk kkknsmvkqn lqrsqkedha rwkseaqqqi ysskllqals
       61 qvslgtpsps aprggravre aadrvlavaa kgrtrwsrai ltsrlklkfr kqkrsqrgsa
      121 aavaaatrts rskkprvsvl klkaksvpnv qrkvkvlgrl vpgcrkqplp vileeatdyi
      181 aalemqvram saladllsgs gaassssapp pewpmpptsq
//
LOCUS       XP_040944156             220 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH148 [Gossypium hirsutum].
ACCESSION   XP_040944156
VERSION     XP_040944156.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088222.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="transcription factor bHLH148"
                     /calculated_mol_wt=23854
     Region          139..194
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(139..140,143..144,146..147,151,168..169)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381450"
     Site            order(149..150,153,156..157,160,169..170,173..174,177,180,
                     183..184,187,190..191,193..194)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..220
                     /gene="LOC121203166"
                     /coded_by="XM_041088222.1:284..946"
                     /db_xref="GeneID:121203166"
ORIGIN      
        1 maslitnpvt ntnsdrskrk kkknsmvkqn lqrsqkedha rwkseaqqqi ysskllqals
       61 qvslgtpsps aprggravre aadrvlavaa kgrtrwsrai ltsrlklkfr kqkrsqrgsa
      121 aavaaatrts rskkprvsvl klkaksvpnv qrkvkvlgrl vpgcrkqplp vileeatdyi
      181 aalemqvram saladllsgs gaassssapp pewpmpptsq
//
LOCUS       XP_040944157             220 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH148 [Gossypium hirsutum].
ACCESSION   XP_040944157
VERSION     XP_040944157.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088223.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="transcription factor bHLH148"
                     /calculated_mol_wt=23854
     Region          139..194
                     /region_name="bHLH_AtIBH1_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and
                     similar proteins; cd11444"
                     /db_xref="CDD:381450"
     Site            order(139..140,143..144,146..147,151,168..169)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381450"
     Site            order(149..150,153,156..157,160,169..170,173..174,177,180,
                     183..184,187,190..191,193..194)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381450"
     CDS             1..220
                     /gene="LOC121203166"
                     /coded_by="XM_041088223.1:393..1055"
                     /db_xref="GeneID:121203166"
ORIGIN      
        1 maslitnpvt ntnsdrskrk kkknsmvkqn lqrsqkedha rwkseaqqqi ysskllqals
       61 qvslgtpsps aprggravre aadrvlavaa kgrtrwsrai ltsrlklkfr kqkrsqrgsa
      121 aavaaatrts rskkprvsvl klkaksvpnv qrkvkvlgrl vpgcrkqplp vileeatdyi
      181 aalemqvram saladllsgs gaassssapp pewpmpptsq
//
LOCUS       XP_016691039             215 aa            linear   PLN 06-AUG-2024
DEFINITION  Werner Syndrome-like exonuclease [Gossypium hirsutum].
ACCESSION   XP_016691039
VERSION     XP_016691039.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835550.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..215
                     /product="Werner Syndrome-like exonuclease"
                     /calculated_mol_wt=24538
     Region          52..210
                     /region_name="WRN_exo"
                     /note="DEDDy 3'-5' exonuclease domain of WRN and similar
                     proteins; cd06141"
                     /db_xref="CDD:176653"
     Site            order(65..68,119..120,122..124,158..159,195,199)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176653"
     Site            order(65,67,124,195,199)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176653"
     Site            order(66..68,119..120,122..123,158..159,195,199)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176653"
     CDS             1..215
                     /gene="LOC107908371"
                     /coded_by="XM_016835550.2:131..778"
                     /db_xref="GeneID:107908371"
ORIGIN      
        1 mnddyitisp hfnpdpyrfr tytvtffstp iittvtttps vvrnwlfrvl rlhsirrhrl
       61 vvglgvqwsp ysslahsaaa tlqlcighqc lifqllhadt vplslrrfln dprntfvgvw
      121 nhsdiamllr sehrlsvsrv vdarhvaaer nglspqlsme klaeillgap dvrkpqsigv
      181 snwndyrlsl eqiqyacvda yvsfelgrvl qvwnw
//
LOCUS       XP_016693922             492 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693922
VERSION     XP_016693922.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838433.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..492
                     /product="nuclear poly(A) polymerase 3 isoform X1"
                     /calculated_mol_wt=56573
     Region          8..324
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     CDS             1..492
                     /gene="LOC107910565"
                     /coded_by="XM_016838433.2:1424..2902"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmvddffiv lynmlksrpe vseiycvkdv
      121 kvplmrfvfd gilidlpfvq lkvlvvpenl dilnpvflrd idetgwksls rvlantqicr
      181 lvpdlkkfqs mlrcvkfwak rrgvygnlng flggihlail aafvcqcdpf vglsalishf
      241 fkkfafwpwp rpvelqdetl hptlnptetr lympirlpfs syeychsnit kstfykirte
      301 flrghnltkd llkfdfdwhn vlepfpytkk yawflkifls askqdelgdw vgwiksrfcc
      361 llfkleevqg lcdpnpaeyi dvniadphvi fywglqagkt naidiksvkd vfwrnistgy
      421 qgpfgkiels ivqasqvpks aqfdtlsqkk kacwkmmdyh qrripiysqh vpqyivgyvs
      481 tngdpeypsa gv
//
LOCUS       XP_016693923             491 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693923
VERSION     XP_016693923.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838434.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="nuclear poly(A) polymerase 3 isoform X2"
                     /calculated_mol_wt=56474
     Region          8..323
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     CDS             1..491
                     /gene="LOC107910565"
                     /coded_by="XM_016838434.2:1424..2899"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmddffivl ynmlksrpev seiycvkdvk
      121 vplmrfvfdg ilidlpfvql kvlvvpenld ilnpvflrdi detgwkslsr vlantqicrl
      181 vpdlkkfqsm lrcvkfwakr rgvygnlngf lggihlaila afvcqcdpfv glsalishff
      241 kkfafwpwpr pvelqdetlh ptlnptetrl ympirlpfss yeychsnitk stfykirtef
      301 lrghnltkdl lkfdfdwhnv lepfpytkky awflkiflsa skqdelgdwv gwiksrfccl
      361 lfkleevqgl cdpnpaeyid vniadphvif ywglqagktn aidiksvkdv fwrnistgyq
      421 gpfgkielsi vqasqvpksa qfdtlsqkkk acwkmmdyhq rripiysqhv pqyivgyvst
      481 ngdpeypsag v
//
LOCUS       XP_016693924             489 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693924
VERSION     XP_016693924.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838435.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..489
                     /product="nuclear poly(A) polymerase 3 isoform X3"
                     /calculated_mol_wt=56170
     Region          8..321
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     CDS             1..489
                     /gene="LOC107910565"
                     /coded_by="XM_016838435.2:1424..2893"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmvddffiv lynmlksrpe vseiycvkdv
      121 kvplmrfvfd gilidlpfvq lkvlvvpenl dilnpvflrd idetgwksls rvlantqicr
      181 lvpdlksmlr cvkfwakrrg vygnlngflg gihlailaaf vcqcdpfvgl salishffkk
      241 fafwpwprpv elqdetlhpt lnptetrlym pirlpfssye ychsnitkst fykirteflr
      301 ghnltkdllk fdfdwhnvle pfpytkkyaw flkiflsask qdelgdwvgw iksrfccllf
      361 kleevqglcd pnpaeyidvn iadphvifyw glqagktnai diksvkdvfw rnistgyqgp
      421 fgkielsivq asqvpksaqf dtlsqkkkac wkmmdyhqrr ipiysqhvpq yivgyvstng
      481 dpeypsagv
//
LOCUS       XP_016693925             456 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016693925
VERSION     XP_016693925.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838436.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..456
                     /product="nuclear poly(A) polymerase 3 isoform X4"
                     /calculated_mol_wt=52573
     Region          8..288
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     CDS             1..456
                     /gene="LOC107910565"
                     /coded_by="XM_016838436.2:1424..2794"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqvhg sesdidalcv gpyfatmvdd
       61 ffivlynmlk srpevseiyc vkdvkvplmr fvfdgilidl pfvqlkvlvv penldilnpv
      121 flrdidetgw kslsrvlant qicrlvpdlk kfqsmlrcvk fwakrrgvyg nlngflggih
      181 lailaafvcq cdpfvglsal ishffkkfaf wpwprpvelq detlhptlnp tetrlympir
      241 lpfssyeych snitkstfyk irteflrghn ltkdllkfdf dwhnvlepfp ytkkyawflk
      301 iflsaskqde lgdwvgwiks rfccllfkle evqglcdpnp aeyidvniad phvifywglq
      361 agktnaidik svkdvfwrni stgyqgpfgk ielsivqasq vpksaqfdtl sqkkkacwkm
      421 mdyhqrripi ysqhvpqyiv gyvstngdpe ypsagv
//
LOCUS       XP_016693926             455 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016693926
VERSION     XP_016693926.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838437.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..455
                     /product="nuclear poly(A) polymerase 3 isoform X5"
                     /calculated_mol_wt=52474
     Region          8..287
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     CDS             1..455
                     /gene="LOC107910565"
                     /coded_by="XM_016838437.2:1424..2791"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqvhg sesdidalcv gpyfatmddf
       61 fivlynmlks rpevseiycv kdvkvplmrf vfdgilidlp fvqlkvlvvp enldilnpvf
      121 lrdidetgwk slsrvlantq icrlvpdlkk fqsmlrcvkf wakrrgvygn lngflggihl
      181 ailaafvcqc dpfvglsali shffkkfafw pwprpvelqd etlhptlnpt etrlympirl
      241 pfssyeychs nitkstfyki rteflrghnl tkdllkfdfd whnvlepfpy tkkyawflki
      301 flsaskqdel gdwvgwiksr fccllfklee vqglcdpnpa eyidvniadp hvifywglqa
      361 gktnaidiks vkdvfwrnis tgyqgpfgki elsivqasqv pksaqfdtls qkkkacwkmm
      421 dyhqrripiy sqhvpqyivg yvstngdpey psagv
//
LOCUS       XP_016693927             438 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_016693927
VERSION     XP_016693927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838438.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..438
                     /product="nuclear poly(A) polymerase 3 isoform X6"
                     /calculated_mol_wt=50259
     Region          4..>317
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..438
                     /gene="LOC107910565"
                     /coded_by="XM_016838438.2:1424..2740"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmvnldiln pvflrdidet gwkslsrvla
      121 ntqicrlvpd lkkfqsmlrc vkfwakrrgv ygnlngflgg ihlailaafv cqcdpfvgls
      181 alishffkkf afwpwprpve lqdetlhptl nptetrlymp irlpfssyey chsnitkstf
      241 ykirteflrg hnltkdllkf dfdwhnvlep fpytkkyawf lkiflsaskq delgdwvgwi
      301 ksrfccllfk leevqglcdp npaeyidvni adphvifywg lqagktnaid iksvkdvfwr
      361 nistgyqgpf gkielsivqa sqvpksaqfd tlsqkkkacw kmmdyhqrri piysqhvpqy
      421 ivgyvstngd peypsagv
//
LOCUS       XP_016693928             437 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_016693928
VERSION     XP_016693928.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838439.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..437
                     /product="nuclear poly(A) polymerase 3 isoform X7"
                     /calculated_mol_wt=50160
     Region          4..>316
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..437
                     /gene="LOC107910565"
                     /coded_by="XM_016838439.2:1424..2737"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmnldilnp vflrdidetg wkslsrvlan
      121 tqicrlvpdl kkfqsmlrcv kfwakrrgvy gnlngflggi hlailaafvc qcdpfvglsa
      181 lishffkkfa fwpwprpvel qdetlhptln ptetrlympi rlpfssyeyc hsnitkstfy
      241 kirteflrgh nltkdllkfd fdwhnvlepf pytkkyawfl kiflsaskqd elgdwvgwik
      301 srfccllfkl eevqglcdpn paeyidvnia dphvifywgl qagktnaidi ksvkdvfwrn
      361 istgyqgpfg kielsivqas qvpksaqfdt lsqkkkacwk mmdyhqrrip iysqhvpqyi
      421 vgyvstngdp eypsagv
//
LOCUS       XP_040944158             435 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040944158
VERSION     XP_040944158.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088224.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..435
                     /product="nuclear poly(A) polymerase 3 isoform X8"
                     /calculated_mol_wt=49856
     Region          4..>314
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..435
                     /gene="LOC107910565"
                     /coded_by="XM_041088224.1:1424..2731"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmvnldiln pvflrdidet gwkslsrvla
      121 ntqicrlvpd lksmlrcvkf wakrrgvygn lngflggihl ailaafvcqc dpfvglsali
      181 shffkkfafw pwprpvelqd etlhptlnpt etrlympirl pfssyeychs nitkstfyki
      241 rteflrghnl tkdllkfdfd whnvlepfpy tkkyawflki flsaskqdel gdwvgwiksr
      301 fccllfklee vqglcdpnpa eyidvniadp hvifywglqa gktnaidiks vkdvfwrnis
      361 tgyqgpfgki elsivqasqv pksaqfdtls qkkkacwkmm dyhqrripiy sqhvpqyivg
      421 yvstngdpey psagv
//
LOCUS       XP_016693929             434 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_016693929
VERSION     XP_016693929.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838440.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..434
                     /product="nuclear poly(A) polymerase 3 isoform X9"
                     /calculated_mol_wt=49757
     Region          4..>313
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..434
                     /gene="LOC107910565"
                     /coded_by="XM_016838440.2:1424..2728"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgvhgsesd idalcvgpyf atmnldilnp vflrdidetg wkslsrvlan
      121 tqicrlvpdl ksmlrcvkfw akrrgvygnl ngflggihla ilaafvcqcd pfvglsalis
      181 hffkkfafwp wprpvelqde tlhptlnpte trlympirlp fssyeychsn itkstfykir
      241 teflrghnlt kdllkfdfdw hnvlepfpyt kkyawflkif lsaskqdelg dwvgwiksrf
      301 ccllfkleev qglcdpnpae yidvniadph vifywglqag ktnaidiksv kdvfwrnist
      361 gyqgpfgkie lsivqasqvp ksaqfdtlsq kkkacwkmmd yhqrripiys qhvpqyivgy
      421 vstngdpeyp sagv
//
LOCUS       XP_016693931             417 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X10 [Gossypium hirsutum].
ACCESSION   XP_016693931
VERSION     XP_016693931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838442.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..417
                     /product="nuclear poly(A) polymerase 3 isoform X10"
                     /calculated_mol_wt=48066
     Region          4..>296
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..417
                     /gene="LOC107910565"
                     /coded_by="XM_016838442.2:1424..2677"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgnldilnp vflrdidetg wkslsrvlan tqicrlvpdl kkfqsmlrcv
      121 kfwakrrgvy gnlngflggi hlailaafvc qcdpfvglsa lishffkkfa fwpwprpvel
      181 qdetlhptln ptetrlympi rlpfssyeyc hsnitkstfy kirteflrgh nltkdllkfd
      241 fdwhnvlepf pytkkyawfl kiflsaskqd elgdwvgwik srfccllfkl eevqglcdpn
      301 paeyidvnia dphvifywgl qagktnaidi ksvkdvfwrn istgyqgpfg kielsivqas
      361 qvpksaqfdt lsqkkkacwk mmdyhqrrip iysqhvpqyi vgyvstngdp eypsagv
//
LOCUS       XP_040944159             414 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X11 [Gossypium hirsutum].
ACCESSION   XP_040944159
VERSION     XP_040944159.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088225.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..414
                     /product="nuclear poly(A) polymerase 3 isoform X11"
                     /calculated_mol_wt=47662
     Region          4..>293
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..414
                     /gene="LOC107910565"
                     /coded_by="XM_041088225.1:1424..2668"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqivv awvkrvawqr rlpkqdiavt
       61 satlltygsy glgnldilnp vflrdidetg wkslsrvlan tqicrlvpdl ksmlrcvkfw
      121 akrrgvygnl ngflggihla ilaafvcqcd pfvglsalis hffkkfafwp wprpvelqde
      181 tlhptlnpte trlympirlp fssyeychsn itkstfykir teflrghnlt kdllkfdfdw
      241 hnvlepfpyt kkyawflkif lsaskqdelg dwvgwiksrf ccllfkleev qglcdpnpae
      301 yidvniadph vifywglqag ktnaidiksv kdvfwrnist gyqgpfgkie lsivqasqvp
      361 ksaqfdtlsq kkkacwkmmd yhqrripiys qhvpqyivgy vstngdpeyp sagv
//
LOCUS       XP_016693932             402 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X12 [Gossypium hirsutum].
ACCESSION   XP_016693932
VERSION     XP_016693932.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838443.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..402
                     /product="nuclear poly(A) polymerase 3 isoform X12"
                     /calculated_mol_wt=46260
     Region          4..>281
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..402
                     /gene="LOC107910565"
                     /coded_by="XM_016838443.2:1424..2632"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqvhg sesdidalcv gpyfatmvnl
       61 dilnpvflrd idetgwksls rvlantqicr lvpdlkkfqs mlrcvkfwak rrgvygnlng
      121 flggihlail aafvcqcdpf vglsalishf fkkfafwpwp rpvelqdetl hptlnptetr
      181 lympirlpfs syeychsnit kstfykirte flrghnltkd llkfdfdwhn vlepfpytkk
      241 yawflkifls askqdelgdw vgwiksrfcc llfkleevqg lcdpnpaeyi dvniadphvi
      301 fywglqagkt naidiksvkd vfwrnistgy qgpfgkiels ivqasqvpks aqfdtlsqkk
      361 kacwkmmdyh qrripiysqh vpqyivgyvs tngdpeypsa gv
//
LOCUS       XP_016693933             401 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X13 [Gossypium hirsutum].
ACCESSION   XP_016693933
VERSION     XP_016693933.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838444.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..401
                     /product="nuclear poly(A) polymerase 3 isoform X13"
                     /calculated_mol_wt=46161
     Region          4..>280
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..401
                     /gene="LOC107910565"
                     /coded_by="XM_016838444.2:1424..2629"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqvhg sesdidalcv gpyfatmnld
       61 ilnpvflrdi detgwkslsr vlantqicrl vpdlkkfqsm lrcvkfwakr rgvygnlngf
      121 lggihlaila afvcqcdpfv glsalishff kkfafwpwpr pvelqdetlh ptlnptetrl
      181 ympirlpfss yeychsnitk stfykirtef lrghnltkdl lkfdfdwhnv lepfpytkky
      241 awflkiflsa skqdelgdwv gwiksrfccl lfkleevqgl cdpnpaeyid vniadphvif
      301 ywglqagktn aidiksvkdv fwrnistgyq gpfgkielsi vqasqvpksa qfdtlsqkkk
      361 acwkmmdyhq rripiysqhv pqyivgyvst ngdpeypsag v
//
LOCUS       XP_040944160             398 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear poly(A) polymerase 3 isoform X14 [Gossypium hirsutum].
ACCESSION   XP_040944160
VERSION     XP_040944160.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088226.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="nuclear poly(A) polymerase 3 isoform X14"
                     /calculated_mol_wt=45757
     Region          4..>277
                     /region_name="PTZ00418"
                     /note="Poly(A) polymerase; Provisional"
                     /db_xref="CDD:240410"
     CDS             1..398
                     /gene="LOC107910565"
                     /coded_by="XM_041088226.1:1424..2620"
                     /db_xref="GeneID:107910565"
ORIGIN      
        1 mkeerslsll qlmvneglvp speeeenrkt vieklkqvhg sesdidalcv gpyfatmnld
       61 ilnpvflrdi detgwkslsr vlantqicrl vpdlksmlrc vkfwakrrgv ygnlngflgg
      121 ihlailaafv cqcdpfvgls alishffkkf afwpwprpve lqdetlhptl nptetrlymp
      181 irlpfssyey chsnitkstf ykirteflrg hnltkdllkf dfdwhnvlep fpytkkyawf
      241 lkiflsaskq delgdwvgwi ksrfccllfk leevqglcdp npaeyidvni adphvifywg
      301 lqagktnaid iksvkdvfwr nistgyqgpf gkielsivqa sqvpksaqfd tlsqkkkacw
      361 kmmdyhqrri piysqhvpqy ivgyvstngd peypsagv
//
LOCUS       XP_016693920             412 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693920
VERSION     XP_016693920.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838431.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693920.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..412
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=45556
     Region          23..146
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            59..61
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            129..132
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Region          <349..395
                     /region_name="Adaptin_binding"
                     /note="Alpha and gamma adaptin binding protein p34;
                     pfam10199"
                     /db_xref="CDD:462994"
     CDS             1..412
                     /gene="LOC107910562"
                     /coded_by="XM_016838431.2:552..1790"
                     /db_xref="GeneID:107910562"
ORIGIN      
        1 meenkegstk lkaqdetrnr psifvigcpn vgkstlisrl asvefeeeds sqvvvhgwti
       61 ntkyytadvs lcmahlqdgf saqtlpifnh stalvmvfdm shlstfsalq dwisytdiqn
      121 leilicignk vdrvpghpvh aeyakrihkl ddssthpssd ftrygiseae gssllenedp
      181 ssdirrkcle wcidhniefi easalnadfd kclsvdgdlq gverlysais ahmwpgmvlk
      241 sgdmitepsl pekedsseee pdyqfeyevl sagsaepgng iveewisasp antfldigks
      301 vdagnsdsdc vqgnitrcek eeshtfptgs algekidrme pnaeepgras asevddgphy
      361 efedleqlms eignirsnlr lmpdfqrrem aaklaikmaa mfggdsddee ei
//
LOCUS       XP_040944161             340 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944161
VERSION     XP_040944161.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088227.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=37536
     Region          <5..74
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            57..60
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Region          <277..323
                     /region_name="Adaptin_binding"
                     /note="Alpha and gamma adaptin binding protein p34;
                     pfam10199"
                     /db_xref="CDD:462994"
     CDS             1..340
                     /gene="LOC107910562"
                     /coded_by="XM_041088227.1:231..1253"
                     /db_xref="GeneID:107910562"
ORIGIN      
        1 mahlqdgfsa qtlpifnhst alvmvfdmsh lstfsalqdw isytdiqnle ilicignkvd
       61 rvpghpvhae yakrihkldd ssthpssdft rygiseaegs sllenedpss dirrkclewc
      121 idhniefiea salnadfdkc lsvdgdlqgv erlysaisah mwpgmvlksg dmitepslpe
      181 kedsseeepd yqfeyevlsa gsaepgngiv eewisaspan tfldigksvd agnsdsdcvq
      241 gnitrcekee shtfptgsal gekidrmepn aeepgrasas evddgphyef edleqlmsei
      301 gnirsnlrlm pdfqrremaa klaikmaamf ggdsddeeei
//
LOCUS       XP_016693921             120 aa            linear   PLN 06-AUG-2024
DEFINITION  ER membrane protein complex subunit 6 [Gossypium hirsutum].
ACCESSION   XP_016693921
VERSION     XP_016693921.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838432.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..120
                     /product="ER membrane protein complex subunit 6"
                     /calculated_mol_wt=13348
     Region          35..111
                     /region_name="EMC6"
                     /note="pfam07019"
                     /db_xref="CDD:462067"
     CDS             1..120
                     /gene="LOC107910563"
                     /coded_by="XM_016838432.2:263..625"
                     /db_xref="GeneID:107910563"
ORIGIN      
        1 maghsdssss ekksseamnd vptfstenmq nnmkviyysr tfmsiiggvi agilgftgfm
       61 gfifyflvma itsigliaka kfsvhlyfds wnriildgfm gglmsfvlfw tfaydivhif
//
LOCUS       XP_016691037             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691037
VERSION     XP_016691037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18705
     Region          29..148
                     /region_name="DUF538"
                     /note="Protein of unknown function, DUF538; pfam04398"
                     /db_xref="CDD:461290"
     CDS             1..166
                     /gene="LOC107908370"
                     /coded_by="XM_016835548.2:194..694"
                     /db_xref="GeneID:107908370"
ORIGIN      
        1 mstplvtmet kakaevyqgn qtcrdkftsl laekglpngl ltlqdihecg yvkdtgfvwl
       61 rrrhcrhkms skkdsfyrfe nvvisydtei tayfetnkik nltgvkakef miwvnlteiy
      121 vqqspsstsm itfktpvgls rsfpvsvfea gavavkelte egkegk
//
LOCUS       XP_040944162             301 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB108 [Gossypium hirsutum].
ACCESSION   XP_040944162
VERSION     XP_040944162.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088228.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..301
                     /product="transcription factor MYB108"
                     /calculated_mol_wt=34128
     Region          19..>124
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..301
                     /gene="LOC121214493"
                     /coded_by="XM_041088228.1:196..1101"
                     /db_xref="GeneID:121214493"
ORIGIN      
        1 mdgkkrgctg nvqseedhem dlirgpwtve edfklinyia ihgegrwnsl arcaglkrtg
       61 kscrlrwlny lrpdirrgni tleeqllile lhsrwgnrws kiaqhlpgrt dneiknywrt
      121 rvqkhakqlk cdvnskqfkd tmrylwmprl veriqaaags ttttttttav vpsasvmgkd
      181 fsthvtpsyt sensstataa ssesfeaqvs pvsdltncyn ngfqvtnnnn pnpdynfqac
      241 ssqvdyyeys lsaanyynhg dggcldlqtn nypmldgadl sdnllnaedf lflqqqfnfn
      301 m
//
LOCUS       XP_016693917            1114 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear export mediator factor Nemf [Gossypium hirsutum].
ACCESSION   XP_016693917
VERSION     XP_016693917.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838428.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693917.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1114
                     /product="nuclear export mediator factor Nemf"
                     /calculated_mol_wt=123474
     Region          10..685
                     /region_name="RqcH_arch"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     NF041120"
                     /db_xref="CDD:469043"
     Region          <927..954
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          997..1090
                     /region_name="NFACT-C"
                     /note="NFACT protein C-terminal domain; pfam11923"
                     /db_xref="CDD:432191"
     CDS             1..1114
                     /gene="LOC107910558"
                     /coded_by="XM_016838428.2:57..3401"
                     /db_xref="GeneID:107910558"
ORIGIN      
        1 mvkvrlntad vaaevkclrr ligmrcsnvy dlspktyifk lmnssgvtes gesekvlllm
       61 esgvrlhtta yvrdksntps gftlklrkhi rtrrledvrq lgydriilfq fglganahyv
      121 ilelyaqgni iltdsdftvl tllrshrddd kgvaimsrhr ypteicrhfe rttilklqta
      181 ltsssdpden qaakvikagn nsldapkgke kdkkgshkgg ktsepnksas dntrskqatl
      241 knvlgealgy gpalaehiil daglvsntkv nkdnkldddk lqalaqavek fedwlqdvis
      301 gdkvpegyil mqkknpgkdg snydgttgqm ydeccpilln qfksrehvnf etfdaaldef
      361 yskiesqrve qqqktkesta nqklnkirld qenrvhilkk evdncvrmae lieynledvd
      421 aailavrval akgmswedla rmvkeekksg npvaglidql hlerncmtll lsnnldemdd
      481 dektlpadkv evdlalsaha narrwyemkk kqeskqekti tahekafkaa erktrlqlsq
      541 ektvatishm rkvhwfekfn wfissenylv isgrdaqqne mivkrymskg dlyvhadlhg
      601 asstiiknhr leqpvppltl nqagcftvch sqawdskivt sawwvyphqv sktaptgeyl
      661 tvgsfmirgk knflpphpli mgfgllfrld esslgshlne rrvrgeeegi ndveesgphi
      721 eisesesdkg geatdvpava aenstslndv gnpnvsdivg gdvasvspql edlldrtlvl
      781 gsaslsgktp vlitsqnnwa dednheekna tvrdkphisk aerrklkkgp gstaananie
      841 kgnekakeng navnvpgdsv qnkkpgggki srgqrgklkk ikekyadqde eersirmall
      901 assgkankne gsddgktkta asinqkpnas gpqdapkicy kckkvghlar dcpehlddtl
      961 hlatgvaddr ragldgsnel drvameeddv neigeeekgr lndvdyltgn plpndillya
     1021 vpvcgpysav qsykyrvkii pgnakkgkaa ktamnlfshm peasnrekel mkactdpelv
     1081 taiignvkit aagltqlkqk qkkskksskg enrs
//
LOCUS       XP_016693918             410 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693918
VERSION     XP_016693918.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838429.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..410
                     /product="30S ribosomal protein S1, chloroplastic"
                     /calculated_mol_wt=44515
     Region          67..363
                     /region_name="PRK07400"
                     /note="30S ribosomal protein S1; Reviewed"
                     /db_xref="CDD:180960"
     CDS             1..410
                     /gene="LOC107910559"
                     /coded_by="XM_016838429.2:83..1315"
                     /db_xref="GeneID:107910559"
ORIGIN      
        1 maslaqqftg lrcpplsssr fsvkpkqtqk vgafaspivs avavsnaqtk drlelkkmfe
       61 dayercrtap megvsftved fqnalekydf dselgtkvkg tvfctdgnga lvditakssa
      121 ylpvqeasih kikhveevgi vpglreefmi igeneaddsl ilslrsiqye lawercrqlq
      181 aedvvvkgkv vgankggvva lveglrgfvp fsqissksta eelldkelpl kfvevdeeqs
      241 rlvfsnrkam adsqaqlgig svvlgtvqsl kpygafidig gingllhvsq ishdrvsdia
      301 tvlqpgdtlk vmilshdrer grvslstkkl eptpgdmirn ptlvfekaee maqtfrqria
      361 qaeamaradm lrfqpesglt lssdgilgpl asdlpaegld lsdvpeaeev
//
LOCUS       XP_016693916             289 aa            linear   PLN 06-AUG-2024
DEFINITION  craniofacial development protein 1 [Gossypium hirsutum].
ACCESSION   XP_016693916
VERSION     XP_016693916.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838427.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="craniofacial development protein 1"
                     /calculated_mol_wt=32037
     Region          206..276
                     /region_name="BCNT"
                     /note="Bucentaur or craniofacial development; pfam07572"
                     /db_xref="CDD:462213"
     CDS             1..289
                     /gene="LOC107910557"
                     /coded_by="XM_016838427.2:183..1052"
                     /db_xref="GeneID:107910557"
ORIGIN      
        1 mattsngpdd sgningkegt lnesvkenam alnsdlqren teaksrveam weqmnkgipk
       61 dalrqfssnk asatnktshk asnnwmkylq mrpavpagdt vqerwteska psatketeal
      121 nkdkavkeat vvqnnvsdea kklaaaalsa vkdaaaaaaa asnrgkieit evrdfagqei
      181 eikkrihads keaaekskay apsavdavle qikkkpklsv ldktkkdwge fkeenkgmed
      241 eldaykkssn qyldkvsflq rtdyrefere rdarlalqar rrpemredp
//
LOCUS       XP_016693912             509 aa            linear   PLN 06-AUG-2024
DEFINITION  dihydrolipoyl dehydrogenase 1, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693912
VERSION     XP_016693912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838423.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..509
                     /product="dihydrolipoyl dehydrogenase 1, mitochondrial"
                     /calculated_mol_wt=53843
     Region          60..509
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
     CDS             1..509
                     /gene="LOC107910553"
                     /coded_by="XM_016838423.2:442..1971"
                     /db_xref="GeneID:107910553"
ORIGIN      
        1 malaslvrrk ayllsrnlsn spadalkysf slsnfsrgfa sgseendvvv igggpggyva
       61 aikaaqlglk ttciekrgtl ggtclnvgci pskallhssh myheathsfa ghgvkfssve
      121 idlpammaqk dkavsnltrg ieglfkknkv nyvkgygkfi spsevsvdti egvstvvkgk
      181 niiiatgsdv kslpgitide krivsstgal alqevpkkli vigagyigle mgsvwgrlgs
      241 evtvvefapd ivpsmdaeir kqfqrslekq kmkfmlktkv vgvdtsgndv kltvepaagg
      301 dqttleadvv lvsagrspft aglgldkigv etdkigrilv ndrfatnvag vyaigdvipg
      361 pmlahkaeed gvacvefiag khghvdydkv pgvvythpev asvgkteeqv kalgvdyrvg
      421 kfpflansra kaiddaegiv kiladketdk ilgvhimapn ageliheavl ainydassed
      481 iarvchahpt msealkeaam atydkpihi
//
LOCUS       XP_016693915             365 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 13 [Gossypium hirsutum].
ACCESSION   XP_016693915
VERSION     XP_016693915.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838426.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693915.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..365
                     /product="probable protein phosphatase 2C 13"
                     /calculated_mol_wt=39903
     Region          47..364
                     /region_name="PLN03145"
                     /note="Protein phosphatase 2c; Provisional"
                     /db_xref="CDD:215603"
     CDS             1..365
                     /gene="LOC107910556"
                     /coded_by="XM_016838426.2:180..1277"
                     /db_xref="GeneID:107910556"
ORIGIN      
        1 mivssnmgae adiifrhqvv dvmsistqvs rfdsvaacae tigdaviess vvkfvprirs
       61 gscanigprr smedehirid dlsshlgsif npsipsafya vfdghggvda aayiksnatr
      121 lffedfdfpq vsdidavflk eledshrkaf lladlalaae ssvnsscgtt vltalvlgrh
      181 llvanagdcr avlcrkgtav emsqdhrpsy lperkrveel ggfiddgyln gylsvtralg
      241 dwdmkfplgs aspliaepdv rqivlsedde fliigcdgiw dvmssqfavs lvrralrrhd
      301 npeecakelv neasrlnssd nltaivicfs sparvescpp hrrrfrscnl seearnklks
      361 llegn
//
LOCUS       XP_040944163             650 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: hydroxyproline O-galactosyltransferase
            GALT3-like [Gossypium hirsutum].
ACCESSION   XP_040944163
VERSION     XP_040944163.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088229.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..650
                     /product="LOW QUALITY PROTEIN: hydroxyproline
                     O-galactosyltransferase GALT3-like"
                     /calculated_mol_wt=73382
     Region          13..649
                     /region_name="PLN03133"
                     /note="beta-1,3-galactosyltransferase; Provisional"
                     /db_xref="CDD:215596"
     CDS             1..650
                     /gene="LOC107910552"
                     /coded_by="XM_041088229.1:249..2201"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107910552"
ORIGIN      
        1 mkplrstfgl fkmkkwyggv lilvlamvmv fsyslretqr pqpkkkqsay dffnnhppid
       61 shrkgndsfk lpkveakkps liqkpklinv egldelyapr nvseqesnvl llwphlhlll
      121 srsdalpetg qgikeaaiaw kellalieee kttklsnnir lkekncpfsv sspdnalfsg
      181 gnilelpcgl vedssitlig tpngsyrsfe idlvgsnfse epkppivlhy nvsvagdnmt
      241 eepfiaqntw tnelgwgkee kcpshvssnn lkvdglglcn eqlvrsimee nqnvsvssgd
      301 astnasqess hasanfpxve gnpftatlwv glegfhmtvn grhetsfayr eklepwsvsg
      361 vkvvggldll safakglpvp edhdlivnsk ilkapvitrk rlvmlvgvfs tgnnferrma
      421 lrrswmqfea vrfgdvavrf figlnknlqv nfelwkeaqa ygdiqfmpfv dyyslislkt
      481 iaicimgtki lpakyimktd ddafvridev lsslkekpsn gllygliefd ssphrekdsk
      541 wyisdeewph ssyppwahgp gyilsrdvak fivqghkere lklfkledva mgiwieefkr
      601 ngrevhyite drfynagces nyilahyqgp rmvlclwekl qkehqaycce
//
LOCUS       XP_016693903            4255 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693903
VERSION     XP_016693903.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838414.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693903.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..4255
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=476031
     Region          1..>835
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          139..383
                     /region_name="VPS13"
                     /note="Vacuolar sorting-associated protein 13, N-terminal;
                     pfam16908"
                     /db_xref="CDD:465309"
     Region          2018..>2169
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2254..>2365
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2649..2753
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     Region          2910..2974
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          3281..3571
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3694..4098
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     CDS             1..4255
                     /gene="LOC107910550"
                     /coded_by="XM_016838414.2:327..13094"
                     /db_xref="GeneID:107910550"
ORIGIN      
        1 mfeaqvlhll rrylgeyvnd lssetlrisv wqgdvvlkdl klkaealnsl nlpvavkagf
       61 vgtitlkvpw kslgnepviv lidrvfvlah ptpdgrnlke edreklfvak iqqieeaeaa
      121 tleaisgskl espppgnswl gsliatiign lkitisnvhi ryedcfsnpg hpfsfgvtla
      181 klaavtmdeq gnetfdtsga ldklrkslql erlamyhdsd nlpwkidkkw edlspkewie
      241 vfedginepa adnevvsmwa mnrnylvspi ngvlkyhrlg nqerknpdip fekaslvlsd
      301 valtiteaqy hdwikllevf sryrayveis hlrpvvpvsk esyvlwwrya amaalhqrkm
      361 cyrfswdqir hmcqlrrryi hlyasmlqqs srvvnieire vekaldskvi llwrllahak
      421 lesvkskeaa eqrrlhkksw ftlgwrtqse dasdgdafdg sqlteerlsk eewrainkll
      481 tyqpnedlms hsgkdmqnmi rffvtvsisr aaariininq teivcgrfeq lhvstkfkhr
      541 nthcdvtlrf ygvsapegsl aqsvcseqkv naltanfvhs pvgenvdwrl satispchvt
      601 vlkesfdrfl efvkrsnavs ptvtletatk lqtkiekvtr raheqfqtvl eeqsrfaldi
      661 dldapkvrip lrarssfkcd shflldfghf tlhtmesqsd eqrqdiyshf yisgrdiaaf
      721 frdcgsdcqd cslmkenssv qsmvmsprle kvdnfyslid rcgmavivdq ikiphtsfps
      781 trvsvqvpnl gihfsparyc rlmellnils famdpcvqpg vvdfqvgvap rsvsdlatda
      841 kilvwrgign svaswqpcfi vlsgyyvyvl dseksqnhlr ylsmagrqvh evpstniggs
      901 pfciavsprg mdtqkaless gtwviefqge eekvtwlrgl iqatyqasdp plvdilgett
      961 dgisesddpq trnskaadlv ingavvetkl ciygetgegv aekleeqlii ellasggkvk
     1021 missaselvl ktklhslkik delqgrlsgn phylacsvlk ydsslesnqt cdlngdemsg
     1081 vhqddddtfk dalsefvsst nsdslshhmd mvdayrfesd evlideqdla qgkglsgeif
     1141 ydaqggddld fvsvtfskkg sgspvydgid skmsirmskl effcnrptlv aligfgfdlg
     1201 svgnktsvtd angtskdkmd kgkaeesgcv egllgydkar vvfylnmdid svtvflnked
     1261 gsqlaifvqe sflldlkvrp aslsiegtlg nmrlrdmtlg tdnwlgwlcd irnpgvesli
     1321 kfkfnsfsgg dddyegynyr lcgrlsavri vflyrfvqei tvyfmelatp hteeviklvd
     1381 kvgdfewliq kseidgaaal kldltfdtpi iivprnstsn efvqldvgll kvrnkiswhg
     1441 fpekdpsavr ldilhaeflg vnmfvgidgc igkpliresr gldvyvrrsl rdvfkkvptf
     1501 slevkidflh gvmsnkeydv irdcitmnln eapslppsfr gsksgskdtm rllvdkvnln
     1561 sqmllsrsvt ilavevnyal lelcngihee splaqialeg lwvsyrmtsl setdlyvtip
     1621 tfsvldiran tkpemrlmlg ssadvpkqas tgnfpcflnk ssssrvnsea gidldvpist
     1681 mfltdcrwrl ssqtyvlrfq qprvlvvpdf llalgeffvp slgaitgree tmnpkndpis
     1741 knnsiilsss iykqnedvvh lsrsrqlvad thgideytyd gcgktivlsd eneakkshpa
     1801 qfcpiviigc gkrlrfvnvk iengsllrky tflsndssys vspeddvdis lmdnlssndd
     1861 ekleenmelt ntpktsclqd gpnvapsftf eaqvvsleft ffdgtksyld dssygekllr
     1921 akmdlnfmya ykendtwira vvkdltvetg sgliildpld isggytsvke ktnislistd
     1981 icihlslgai slllnlqyqa aaalqfgnai plapcinfdr iwvspkengs hnnltiwrpq
     2041 apsnyvilgd cvtsspipps qavlavsnty grvrkpvgfk higflshvlg legvdghsgv
     2101 dsdcslwmpi sppgyismgc vanvgnhppp nhvvyclrsd lvtsttysec llnelpnqhf
     2161 tsgfsiwrld nvlgsfyahs siaypskgns sdlshlllws svwsyaslqe yipdtvdnnh
     2221 ssqqtsnqgd sssgwdilrs iskasscyms tphferiwwd kggglrrpvs iwrpipcpgh
     2281 ailgdciteg leppalgiil ksedpeisak pvqftkvahi tgkgfdevff wypiappgya
     2341 slgcivsrtd eapcmdffcc prmdlvsptn iievpisrnl sskashcwsi wkvenqastf
     2401 larsdikmps mrlaytisds vkhktrenvt aeiklrffsl tvldslhgmm tplfdvtian
     2461 iklvthgrle amnavfissi aastfnkhle aweplvepfd gifkfetydi nvnsssiigk
     2521 rmhiaatniv ninvsamnld tlietilswr rqleldqkat klveesgahs gnqdlafsal
     2581 deedlqtvvv enqlgsdlyi krieqnsevv dqlhhggfas vwvpparfsd rlnvaeesrq
     2641 aryyvaaqil fakdlpivdd gnshnffcal rlvidsqatd qqkllpqsar tkcvkplvsd
     2701 kvypkkgiak wnelfifevp rksqgvakle vevtnlsaka gkgevvgals fpighranil
     2761 kklsssrmlp prndtqnies yslrrkvqsn nvedtyghvk ifvstsyfer nttaifqkda
     2821 esrdasdkdi gfwvrlgseg swesvrsllp lsvvpksfqs efiamevvmr ngkkhaifrg
     2881 latvvndsdv nldisvchvs miqdsgsstp nivveeifen qlyhpisgwg nkwpgfqgsd
     2941 pacwstrdfs csskeffeps lpngwewist wtidksqfvd edgwayaady pnqwpptssk
     3001 shiksghdvv rrrrwirtrq liaekekccv kkdfttinpg ystvlswgst skasdqclri
     3061 rpsvdyphpp yawghtvvva vasnfasgkd qpfvdqcyik stspqgskkp nfalllnqle
     3121 kkdillccsa tvesrqiwls vgadasalht efnhpvydwr isvnsplkle nrlscpaeft
     3181 iwektkdrny ierehgiiss rmsahiysvd iqrpiylsfl vqsdwvlekd pvlildlssg
     3241 ahissfwmih qqskspfmcf crrlrvsver dmggtgaapk tirifvpywi indsalplay
     3301 qvveiegsdn admdsrsska vkstrtvlrt psylaerrhs gprrniqvle aiedtspias
     3361 mlspqdcagr sgvtlftsqk dtyvsprigi avalrdseiy spgisllele kkerfdvkaf
     3421 ssdgyyykls alvnmttdrt kvihlqpyml fvnrvglsfc lqqcysetve wihptdppkl
     3481 fgwqssskae llklqvdgyg wskpfsvste gvmrislknd tgsdhlflki evrsgtkssr
     3541 yevifrpnss sspyrienrs iflpilfqqv dgtsgswhll lpntavsflw edlgrrhlle
     3601 iladgadpsr sgkynideif dhlpidvagp aqalritilk eervnvvkis dwmpeneppv
     3661 iisqtipstl selsrseshq qqpqstsece fhfivefael gvsiidhtpe eilhlslqnv
     3721 hlayssglgs glsrfklrmr giqmdnqlpl tptpvlfrpq kigqetdyil kisvtlqtkg
     3781 sldlsvypyi gfhgpdnsaf linihepiiw rihemmqqvn lsrlsdsntt avsfdpiihi
     3841 gilnisevrl kvsmamspsq rprgvlgfws slmtalgnte nmtvklnqrf henlcmrqsm
     3901 minnaisnik ndllgqplrl lsgldilsna ssalghmskg vaalsmdkkf iqsrqrqgsk
     3961 svedlgdvir egggalakgl frgvtgiltk plegakssgv egfvqgvgkg iigaaaqpvs
     4021 gvldllsktt eganamrlki asaiasdeqi lrrrlpravt gdsllrpyde ykargqvilq
     4081 laqsgsffvd ifkvrgkfal sdayedhfml pkgkiimvth rriillqqts litqrkfnpm
     4141 rdpcsvlwdv pwddlktmel trgkkdlhka ppsrlvlhlk akptetkeqv rvikcnrgth
     4201 qtlevyssve ramitygrnl skellkkatk pyspvtdgta temipkevas swcpq
//
LOCUS       XP_040944164            4253 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944164
VERSION     XP_040944164.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088230.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..4253
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=475816
     Region          1..>835
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          139..383
                     /region_name="VPS13"
                     /note="Vacuolar sorting-associated protein 13, N-terminal;
                     pfam16908"
                     /db_xref="CDD:465309"
     Region          2018..>2169
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2254..>2365
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2649..2751
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     Region          2908..2972
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          3279..3569
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3692..4096
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     CDS             1..4253
                     /gene="LOC107910550"
                     /coded_by="XM_041088230.1:327..13088"
                     /db_xref="GeneID:107910550"
ORIGIN      
        1 mfeaqvlhll rrylgeyvnd lssetlrisv wqgdvvlkdl klkaealnsl nlpvavkagf
       61 vgtitlkvpw kslgnepviv lidrvfvlah ptpdgrnlke edreklfvak iqqieeaeaa
      121 tleaisgskl espppgnswl gsliatiign lkitisnvhi ryedcfsnpg hpfsfgvtla
      181 klaavtmdeq gnetfdtsga ldklrkslql erlamyhdsd nlpwkidkkw edlspkewie
      241 vfedginepa adnevvsmwa mnrnylvspi ngvlkyhrlg nqerknpdip fekaslvlsd
      301 valtiteaqy hdwikllevf sryrayveis hlrpvvpvsk esyvlwwrya amaalhqrkm
      361 cyrfswdqir hmcqlrrryi hlyasmlqqs srvvnieire vekaldskvi llwrllahak
      421 lesvkskeaa eqrrlhkksw ftlgwrtqse dasdgdafdg sqlteerlsk eewrainkll
      481 tyqpnedlms hsgkdmqnmi rffvtvsisr aaariininq teivcgrfeq lhvstkfkhr
      541 nthcdvtlrf ygvsapegsl aqsvcseqkv naltanfvhs pvgenvdwrl satispchvt
      601 vlkesfdrfl efvkrsnavs ptvtletatk lqtkiekvtr raheqfqtvl eeqsrfaldi
      661 dldapkvrip lrarssfkcd shflldfghf tlhtmesqsd eqrqdiyshf yisgrdiaaf
      721 frdcgsdcqd cslmkenssv qsmvmsprle kvdnfyslid rcgmavivdq ikiphtsfps
      781 trvsvqvpnl gihfsparyc rlmellnils famdpcvqpg vvdfqvgvap rsvsdlatda
      841 kilvwrgign svaswqpcfi vlsgyyvyvl dseksqnhlr ylsmagrqvh evpstniggs
      901 pfciavsprg mdtqkaless gtwviefqge eekvtwlrgl iqatyqasdp plvdilgett
      961 dgisesddpq trnskaadlv ingavvetkl ciygetgegv aekleeqlii ellasggkvk
     1021 missaselvl ktklhslkik delqgrlsgn phylacsvlk ydsslesnqt cdlngdemsg
     1081 vhqddddtfk dalsefvsst nsdslshhmd mvdayrfesd evlideqdla qgkglsgeif
     1141 ydaqggddld fvsvtfskkg sgspvydgid skmsirmskl effcnrptlv aligfgfdlg
     1201 svgnktsvtd angtskdkmd kgkaeesgcv egllgydkar vvfylnmdid svtvflnked
     1261 gsqlaifvqe sflldlkvrp aslsiegtlg nmrlrdmtlg tdnwlgwlcd irnpgvesli
     1321 kfkfnsfsgg dddyegynyr lcgrlsavri vflyrfvqei tvyfmelatp hteeviklvd
     1381 kvgdfewliq kseidgaaal kldltfdtpi iivprnstsn efvqldvgll kvrnkiswhg
     1441 fpekdpsavr ldilhaeflg vnmfvgidgc igkpliresr gldvyvrrsl rdvfkkvptf
     1501 slevkidflh gvmsnkeydv irdcitmnln eapslppsfr gsksgskdtm rllvdkvnln
     1561 sqmllsrsvt ilavevnyal lelcngihee splaqialeg lwvsyrmtsl setdlyvtip
     1621 tfsvldiran tkpemrlmlg ssadvpkqas tgnfpcflnk ssssrvnsea gidldvpist
     1681 mfltdcrwrl ssqtyvlrfq qprvlvvpdf llalgeffvp slgaitgree tmnpkndpis
     1741 knnsiilsss iykqnedvvh lsrsrqlvad thgideytyd gcgktivlsd eneakkshpa
     1801 qfcpiviigc gkrlrfvnvk iengsllrky tflsndssys vspeddvdis lmdnlssndd
     1861 ekleenmelt ntpktsclqd gpnvapsftf eaqvvsleft ffdgtksyld dssygekllr
     1921 akmdlnfmya ykendtwira vvkdltvetg sgliildpld isggytsvke ktnislistd
     1981 icihlslgai slllnlqyqa aaalqfgnai plapcinfdr iwvspkengs hnnltiwrpq
     2041 apsnyvilgd cvtsspipps qavlavsnty grvrkpvgfk higflshvlg legvdghsgv
     2101 dsdcslwmpi sppgyismgc vanvgnhppp nhvvyclrsd lvtsttysec llnelpnqhf
     2161 tsgfsiwrld nvlgsfyahs siaypskgns sdlshlllws svwsyaslqe yipdtvdnnh
     2221 ssqqtsnqgd sssgwdilrs iskasscyms tphferiwwd kggglrrpvs iwrpipcpgh
     2281 ailgdciteg leppalgiil ksedpeisak pvqftkvahi tgkgfdevff wypiappgya
     2341 slgcivsrtd eapcmdffcc prmdlvsptn iievpisrnl sskashcwsi wkvenqastf
     2401 larsdikmps mrlaytisds vkhktrenvt aeiklrffsl tvldslhgmm tplfdvtian
     2461 iklvthgrle amnavfissi aastfnkhle aweplvepfd gifkfetydi nvnsssiigk
     2521 rmhiaatniv ninvsamnld tlietilswr rqleldqkat klveesgahs gnqdlafsal
     2581 deedlqtvvv enqlgsdlyi krieqnsevv dqlhhggfas vwvpparfsd rlnvaeesrq
     2641 aryyvaaqil fakdlpivdd gnshnffcal rlvidsqatd qqkllpqsar tkcvkplvsd
     2701 kvypkkgiak wnelfifevp rkgvakleve vtnlsakagk gevvgalsfp ighranilkk
     2761 lsssrmlppr ndtqniesys lrrkvqsnnv edtyghvkif vstsyfernt taifqkdaes
     2821 rdasdkdigf wvrlgsegsw esvrsllpls vvpksfqsef iamevvmrng kkhaifrgla
     2881 tvvndsdvnl disvchvsmi qdsgsstpni vveeifenql yhpisgwgnk wpgfqgsdpa
     2941 cwstrdfscs skeffepslp ngwewistwt idksqfvded gwayaadypn qwpptssksh
     3001 iksghdvvrr rrwirtrqli aekekccvkk dfttinpgys tvlswgstsk asdqclrirp
     3061 svdyphppya wghtvvvava snfasgkdqp fvdqcyikst spqgskkpnf alllnqlekk
     3121 dillccsatv esrqiwlsvg adasalhtef nhpvydwris vnsplklenr lscpaeftiw
     3181 ektkdrnyie rehgiissrm sahiysvdiq rpiylsflvq sdwvlekdpv lildlssgah
     3241 issfwmihqq skspfmcfcr rlrvsverdm ggtgaapkti rifvpywiin dsalplayqv
     3301 veiegsdnad mdsrsskavk strtvlrtps ylaerrhsgp rrniqvleai edtspiasml
     3361 spqdcagrsg vtlftsqkdt yvsprigiav alrdseiysp gisllelekk erfdvkafss
     3421 dgyyyklsal vnmttdrtkv ihlqpymlfv nrvglsfclq qcysetvewi hptdppklfg
     3481 wqssskaell klqvdgygws kpfsvstegv mrislkndtg sdhlflkiev rsgtkssrye
     3541 vifrpnssss pyrienrsif lpilfqqvdg tsgswhlllp ntavsflwed lgrrhlleil
     3601 adgadpsrsg kynideifdh lpidvagpaq alritilkee rvnvvkisdw mpeneppvii
     3661 sqtipstlse lsrseshqqq pqstsecefh fivefaelgv siidhtpeei lhlslqnvhl
     3721 ayssglgsgl srfklrmrgi qmdnqlpltp tpvlfrpqki gqetdyilki svtlqtkgsl
     3781 dlsvypyigf hgpdnsafli nihepiiwri hemmqqvnls rlsdsnttav sfdpiihigi
     3841 lnisevrlkv smamspsqrp rgvlgfwssl mtalgntenm tvklnqrfhe nlcmrqsmmi
     3901 nnaisniknd llgqplrlls gldilsnass alghmskgva alsmdkkfiq srqrqgsksv
     3961 edlgdvireg ggalakglfr gvtgiltkpl egakssgveg fvqgvgkgii gaaaqpvsgv
     4021 ldllsktteg anamrlkias aiasdeqilr rrlpravtgd sllrpydeyk argqvilqla
     4081 qsgsffvdif kvrgkfalsd ayedhfmlpk gkiimvthrr iillqqtsli tqrkfnpmrd
     4141 pcsvlwdvpw ddlktmeltr gkkdlhkapp srlvlhlkak ptetkeqvrv ikcnrgthqt
     4201 levyssvera mitygrnlsk ellkkatkpy spvtdgtate mipkevassw cpq
//
LOCUS       XP_040944165            4248 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944165
VERSION     XP_040944165.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088231.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..4248
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=475215
     Region          1..>835
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          139..383
                     /region_name="VPS13"
                     /note="Vacuolar sorting-associated protein 13, N-terminal;
                     pfam16908"
                     /db_xref="CDD:465309"
     Region          2018..>2169
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2254..>2365
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2649..2753
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     Region          2910..2974
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          3274..3564
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3687..4091
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     CDS             1..4248
                     /gene="LOC107910550"
                     /coded_by="XM_041088231.1:327..13073"
                     /db_xref="GeneID:107910550"
ORIGIN      
        1 mfeaqvlhll rrylgeyvnd lssetlrisv wqgdvvlkdl klkaealnsl nlpvavkagf
       61 vgtitlkvpw kslgnepviv lidrvfvlah ptpdgrnlke edreklfvak iqqieeaeaa
      121 tleaisgskl espppgnswl gsliatiign lkitisnvhi ryedcfsnpg hpfsfgvtla
      181 klaavtmdeq gnetfdtsga ldklrkslql erlamyhdsd nlpwkidkkw edlspkewie
      241 vfedginepa adnevvsmwa mnrnylvspi ngvlkyhrlg nqerknpdip fekaslvlsd
      301 valtiteaqy hdwikllevf sryrayveis hlrpvvpvsk esyvlwwrya amaalhqrkm
      361 cyrfswdqir hmcqlrrryi hlyasmlqqs srvvnieire vekaldskvi llwrllahak
      421 lesvkskeaa eqrrlhkksw ftlgwrtqse dasdgdafdg sqlteerlsk eewrainkll
      481 tyqpnedlms hsgkdmqnmi rffvtvsisr aaariininq teivcgrfeq lhvstkfkhr
      541 nthcdvtlrf ygvsapegsl aqsvcseqkv naltanfvhs pvgenvdwrl satispchvt
      601 vlkesfdrfl efvkrsnavs ptvtletatk lqtkiekvtr raheqfqtvl eeqsrfaldi
      661 dldapkvrip lrarssfkcd shflldfghf tlhtmesqsd eqrqdiyshf yisgrdiaaf
      721 frdcgsdcqd cslmkenssv qsmvmsprle kvdnfyslid rcgmavivdq ikiphtsfps
      781 trvsvqvpnl gihfsparyc rlmellnils famdpcvqpg vvdfqvgvap rsvsdlatda
      841 kilvwrgign svaswqpcfi vlsgyyvyvl dseksqnhlr ylsmagrqvh evpstniggs
      901 pfciavsprg mdtqkaless gtwviefqge eekvtwlrgl iqatyqasdp plvdilgett
      961 dgisesddpq trnskaadlv ingavvetkl ciygetgegv aekleeqlii ellasggkvk
     1021 missaselvl ktklhslkik delqgrlsgn phylacsvlk ydsslesnqt cdlngdemsg
     1081 vhqddddtfk dalsefvsst nsdslshhmd mvdayrfesd evlideqdla qgkglsgeif
     1141 ydaqggddld fvsvtfskkg sgspvydgid skmsirmskl effcnrptlv aligfgfdlg
     1201 svgnktsvtd angtskdkmd kgkaeesgcv egllgydkar vvfylnmdid svtvflnked
     1261 gsqlaifvqe sflldlkvrp aslsiegtlg nmrlrdmtlg tdnwlgwlcd irnpgvesli
     1321 kfkfnsfsgg dddyegynyr lcgrlsavri vflyrfvqei tvyfmelatp hteeviklvd
     1381 kvgdfewliq kseidgaaal kldltfdtpi iivprnstsn efvqldvgll kvrnkiswhg
     1441 fpekdpsavr ldilhaeflg vnmfvgidgc igkpliresr gldvyvrrsl rdvfkkvptf
     1501 slevkidflh gvmsnkeydv irdcitmnln eapslppsfr gsksgskdtm rllvdkvnln
     1561 sqmllsrsvt ilavevnyal lelcngihee splaqialeg lwvsyrmtsl setdlyvtip
     1621 tfsvldiran tkpemrlmlg ssadvpkqas tgnfpcflnk ssssrvnsea gidldvpist
     1681 mfltdcrwrl ssqtyvlrfq qprvlvvpdf llalgeffvp slgaitgree tmnpkndpis
     1741 knnsiilsss iykqnedvvh lsrsrqlvad thgideytyd gcgktivlsd eneakkshpa
     1801 qfcpiviigc gkrlrfvnvk iengsllrky tflsndssys vspeddvdis lmdnlssndd
     1861 ekleenmelt ntpktsclqd gpnvapsftf eaqvvsleft ffdgtksyld dssygekllr
     1921 akmdlnfmya ykendtwira vvkdltvetg sgliildpld isggytsvke ktnislistd
     1981 icihlslgai slllnlqyqa aaalqfgnai plapcinfdr iwvspkengs hnnltiwrpq
     2041 apsnyvilgd cvtsspipps qavlavsnty grvrkpvgfk higflshvlg legvdghsgv
     2101 dsdcslwmpi sppgyismgc vanvgnhppp nhvvyclrsd lvtsttysec llnelpnqhf
     2161 tsgfsiwrld nvlgsfyahs siaypskgns sdlshlllws svwsyaslqe yipdtvdnnh
     2221 ssqqtsnqgd sssgwdilrs iskasscyms tphferiwwd kggglrrpvs iwrpipcpgh
     2281 ailgdciteg leppalgiil ksedpeisak pvqftkvahi tgkgfdevff wypiappgya
     2341 slgcivsrtd eapcmdffcc prmdlvsptn iievpisrnl sskashcwsi wkvenqastf
     2401 larsdikmps mrlaytisds vkhktrenvt aeiklrffsl tvldslhgmm tplfdvtian
     2461 iklvthgrle amnavfissi aastfnkhle aweplvepfd gifkfetydi nvnsssiigk
     2521 rmhiaatniv ninvsamnld tlietilswr rqleldqkat klveesgahs gnqdlafsal
     2581 deedlqtvvv enqlgsdlyi krieqnsevv dqlhhggfas vwvpparfsd rlnvaeesrq
     2641 aryyvaaqil fakdlpivdd gnshnffcal rlvidsqatd qqkllpqsar tkcvkplvsd
     2701 kvypkkgiak wnelfifevp rksqgvakle vevtnlsaka gkgevvgals fpighranil
     2761 kklsssrmlp prndtqnies yslrrkvqsn nvedtyghvk ifvstsyfer nttaifqkda
     2821 esrdasdkdi gfwvrlgseg swesvrsllp lsvvpksfqs efiamevvmr ngkkhaifrg
     2881 latvvndsdv nldisvchvs miqdsgsstp nivveeifen qlyhpisgwg nkwpgfqgsd
     2941 pacwstrdfs csskeffeps lpngwewist wtidksqfvd edgwayaady pnqwpptssk
     3001 shiksghdvv rrrrwirtrq liaekekccv kkdfttinpg ystvlswgst skasdqclri
     3061 rpsvdyphpp yawghtvvva vasnfasgkd qpfvdqcyik stspqgskkp nfalllnqle
     3121 kkdillccsa tvesrqiwls vgadasalht efnhpvydwr isvnsplkle nrlscpaeft
     3181 iwektkdrny ierehgiiss rmsahiysvd iqrpiylsfl vqsdwvlekd pvlildlssg
     3241 ahissfwmih qqskrrlrvs verdmggtga apktirifvp ywiindsalp layqvveieg
     3301 sdnadmdsrs skavkstrtv lrtpsylaer rhsgprrniq vleaiedtsp iasmlspqdc
     3361 agrsgvtlft sqkdtyvspr igiavalrds eiyspgisll elekkerfdv kafssdgyyy
     3421 klsalvnmtt drtkvihlqp ymlfvnrvgl sfclqqcyse tvewihptdp pklfgwqsss
     3481 kaellklqvd gygwskpfsv stegvmrisl kndtgsdhlf lkievrsgtk ssryevifrp
     3541 nsssspyrie nrsiflpilf qqvdgtsgsw hlllpntavs flwedlgrrh lleiladgad
     3601 psrsgkynid eifdhlpidv agpaqalrit ilkeervnvv kisdwmpene ppviisqtip
     3661 stlselsrse shqqqpqsts ecefhfivef aelgvsiidh tpeeilhlsl qnvhlayssg
     3721 lgsglsrfkl rmrgiqmdnq lpltptpvlf rpqkigqetd yilkisvtlq tkgsldlsvy
     3781 pyigfhgpdn saflinihep iiwrihemmq qvnlsrlsds nttavsfdpi ihigilnise
     3841 vrlkvsmams psqrprgvlg fwsslmtalg ntenmtvkln qrfhenlcmr qsmminnais
     3901 nikndllgqp lrllsgldil snassalghm skgvaalsmd kkfiqsrqrq gsksvedlgd
     3961 viregggala kglfrgvtgi ltkplegaks sgvegfvqgv gkgiigaaaq pvsgvldlls
     4021 ktteganamr lkiasaiasd eqilrrrlpr avtgdsllrp ydeykargqv ilqlaqsgsf
     4081 fvdifkvrgk falsdayedh fmlpkgkiim vthrriillq qtslitqrkf npmrdpcsvl
     4141 wdvpwddlkt meltrgkkdl hkappsrlvl hlkakptetk eqvrvikcnr gthqtlevys
     4201 sveramityg rnlskellkk atkpyspvtd gtatemipke vasswcpq
//
LOCUS       XP_016693910            4246 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693910
VERSION     XP_016693910.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838421.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693910.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..4246
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=475000
     Region          1..>835
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          139..383
                     /region_name="VPS13"
                     /note="Vacuolar sorting-associated protein 13, N-terminal;
                     pfam16908"
                     /db_xref="CDD:465309"
     Region          2018..>2169
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2254..>2365
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2649..2751
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     Region          2908..2972
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          3272..3562
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3685..4089
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     CDS             1..4246
                     /gene="LOC107910550"
                     /coded_by="XM_016838421.2:327..13067"
                     /db_xref="GeneID:107910550"
ORIGIN      
        1 mfeaqvlhll rrylgeyvnd lssetlrisv wqgdvvlkdl klkaealnsl nlpvavkagf
       61 vgtitlkvpw kslgnepviv lidrvfvlah ptpdgrnlke edreklfvak iqqieeaeaa
      121 tleaisgskl espppgnswl gsliatiign lkitisnvhi ryedcfsnpg hpfsfgvtla
      181 klaavtmdeq gnetfdtsga ldklrkslql erlamyhdsd nlpwkidkkw edlspkewie
      241 vfedginepa adnevvsmwa mnrnylvspi ngvlkyhrlg nqerknpdip fekaslvlsd
      301 valtiteaqy hdwikllevf sryrayveis hlrpvvpvsk esyvlwwrya amaalhqrkm
      361 cyrfswdqir hmcqlrrryi hlyasmlqqs srvvnieire vekaldskvi llwrllahak
      421 lesvkskeaa eqrrlhkksw ftlgwrtqse dasdgdafdg sqlteerlsk eewrainkll
      481 tyqpnedlms hsgkdmqnmi rffvtvsisr aaariininq teivcgrfeq lhvstkfkhr
      541 nthcdvtlrf ygvsapegsl aqsvcseqkv naltanfvhs pvgenvdwrl satispchvt
      601 vlkesfdrfl efvkrsnavs ptvtletatk lqtkiekvtr raheqfqtvl eeqsrfaldi
      661 dldapkvrip lrarssfkcd shflldfghf tlhtmesqsd eqrqdiyshf yisgrdiaaf
      721 frdcgsdcqd cslmkenssv qsmvmsprle kvdnfyslid rcgmavivdq ikiphtsfps
      781 trvsvqvpnl gihfsparyc rlmellnils famdpcvqpg vvdfqvgvap rsvsdlatda
      841 kilvwrgign svaswqpcfi vlsgyyvyvl dseksqnhlr ylsmagrqvh evpstniggs
      901 pfciavsprg mdtqkaless gtwviefqge eekvtwlrgl iqatyqasdp plvdilgett
      961 dgisesddpq trnskaadlv ingavvetkl ciygetgegv aekleeqlii ellasggkvk
     1021 missaselvl ktklhslkik delqgrlsgn phylacsvlk ydsslesnqt cdlngdemsg
     1081 vhqddddtfk dalsefvsst nsdslshhmd mvdayrfesd evlideqdla qgkglsgeif
     1141 ydaqggddld fvsvtfskkg sgspvydgid skmsirmskl effcnrptlv aligfgfdlg
     1201 svgnktsvtd angtskdkmd kgkaeesgcv egllgydkar vvfylnmdid svtvflnked
     1261 gsqlaifvqe sflldlkvrp aslsiegtlg nmrlrdmtlg tdnwlgwlcd irnpgvesli
     1321 kfkfnsfsgg dddyegynyr lcgrlsavri vflyrfvqei tvyfmelatp hteeviklvd
     1381 kvgdfewliq kseidgaaal kldltfdtpi iivprnstsn efvqldvgll kvrnkiswhg
     1441 fpekdpsavr ldilhaeflg vnmfvgidgc igkpliresr gldvyvrrsl rdvfkkvptf
     1501 slevkidflh gvmsnkeydv irdcitmnln eapslppsfr gsksgskdtm rllvdkvnln
     1561 sqmllsrsvt ilavevnyal lelcngihee splaqialeg lwvsyrmtsl setdlyvtip
     1621 tfsvldiran tkpemrlmlg ssadvpkqas tgnfpcflnk ssssrvnsea gidldvpist
     1681 mfltdcrwrl ssqtyvlrfq qprvlvvpdf llalgeffvp slgaitgree tmnpkndpis
     1741 knnsiilsss iykqnedvvh lsrsrqlvad thgideytyd gcgktivlsd eneakkshpa
     1801 qfcpiviigc gkrlrfvnvk iengsllrky tflsndssys vspeddvdis lmdnlssndd
     1861 ekleenmelt ntpktsclqd gpnvapsftf eaqvvsleft ffdgtksyld dssygekllr
     1921 akmdlnfmya ykendtwira vvkdltvetg sgliildpld isggytsvke ktnislistd
     1981 icihlslgai slllnlqyqa aaalqfgnai plapcinfdr iwvspkengs hnnltiwrpq
     2041 apsnyvilgd cvtsspipps qavlavsnty grvrkpvgfk higflshvlg legvdghsgv
     2101 dsdcslwmpi sppgyismgc vanvgnhppp nhvvyclrsd lvtsttysec llnelpnqhf
     2161 tsgfsiwrld nvlgsfyahs siaypskgns sdlshlllws svwsyaslqe yipdtvdnnh
     2221 ssqqtsnqgd sssgwdilrs iskasscyms tphferiwwd kggglrrpvs iwrpipcpgh
     2281 ailgdciteg leppalgiil ksedpeisak pvqftkvahi tgkgfdevff wypiappgya
     2341 slgcivsrtd eapcmdffcc prmdlvsptn iievpisrnl sskashcwsi wkvenqastf
     2401 larsdikmps mrlaytisds vkhktrenvt aeiklrffsl tvldslhgmm tplfdvtian
     2461 iklvthgrle amnavfissi aastfnkhle aweplvepfd gifkfetydi nvnsssiigk
     2521 rmhiaatniv ninvsamnld tlietilswr rqleldqkat klveesgahs gnqdlafsal
     2581 deedlqtvvv enqlgsdlyi krieqnsevv dqlhhggfas vwvpparfsd rlnvaeesrq
     2641 aryyvaaqil fakdlpivdd gnshnffcal rlvidsqatd qqkllpqsar tkcvkplvsd
     2701 kvypkkgiak wnelfifevp rkgvakleve vtnlsakagk gevvgalsfp ighranilkk
     2761 lsssrmlppr ndtqniesys lrrkvqsnnv edtyghvkif vstsyfernt taifqkdaes
     2821 rdasdkdigf wvrlgsegsw esvrsllpls vvpksfqsef iamevvmrng kkhaifrgla
     2881 tvvndsdvnl disvchvsmi qdsgsstpni vveeifenql yhpisgwgnk wpgfqgsdpa
     2941 cwstrdfscs skeffepslp ngwewistwt idksqfvded gwayaadypn qwpptssksh
     3001 iksghdvvrr rrwirtrqli aekekccvkk dfttinpgys tvlswgstsk asdqclrirp
     3061 svdyphppya wghtvvvava snfasgkdqp fvdqcyikst spqgskkpnf alllnqlekk
     3121 dillccsatv esrqiwlsvg adasalhtef nhpvydwris vnsplklenr lscpaeftiw
     3181 ektkdrnyie rehgiissrm sahiysvdiq rpiylsflvq sdwvlekdpv lildlssgah
     3241 issfwmihqq skrrlrvsve rdmggtgaap ktirifvpyw iindsalpla yqvveiegsd
     3301 nadmdsrssk avkstrtvlr tpsylaerrh sgprrniqvl eaiedtspia smlspqdcag
     3361 rsgvtlftsq kdtyvsprig iavalrdsei yspgisllel ekkerfdvka fssdgyyykl
     3421 salvnmttdr tkvihlqpym lfvnrvglsf clqqcysetv ewihptdppk lfgwqssska
     3481 ellklqvdgy gwskpfsvst egvmrislkn dtgsdhlflk ievrsgtkss ryevifrpns
     3541 ssspyrienr siflpilfqq vdgtsgswhl llpntavsfl wedlgrrhll eiladgadps
     3601 rsgkynidei fdhlpidvag paqalritil keervnvvki sdwmpenepp viisqtipst
     3661 lselsrsesh qqqpqstsec efhfivefae lgvsiidhtp eeilhlslqn vhlayssglg
     3721 sglsrfklrm rgiqmdnqlp ltptpvlfrp qkigqetdyi lkisvtlqtk gsldlsvypy
     3781 igfhgpdnsa flinihepii wrihemmqqv nlsrlsdsnt tavsfdpiih igilnisevr
     3841 lkvsmamsps qrprgvlgfw sslmtalgnt enmtvklnqr fhenlcmrqs mminnaisni
     3901 kndllgqplr llsgldilsn assalghmsk gvaalsmdkk fiqsrqrqgs ksvedlgdvi
     3961 regggalakg lfrgvtgilt kplegakssg vegfvqgvgk giigaaaqpv sgvldllskt
     4021 teganamrlk iasaiasdeq ilrrrlprav tgdsllrpyd eykargqvil qlaqsgsffv
     4081 difkvrgkfa lsdayedhfm lpkgkiimvt hrriillqqt slitqrkfnp mrdpcsvlwd
     4141 vpwddlktme ltrgkkdlhk appsrlvlhl kakptetkeq vrvikcnrgt hqtlevyssv
     4201 eramitygrn lskellkkat kpyspvtdgt atemipkeva sswcpq
//
LOCUS       XP_040944166            4114 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944166
VERSION     XP_040944166.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088232.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..4114
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=460122
     Region          1..>835
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          139..383
                     /region_name="VPS13"
                     /note="Vacuolar sorting-associated protein 13, N-terminal;
                     pfam16908"
                     /db_xref="CDD:465309"
     Region          2018..>2169
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2254..>2365
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2649..2753
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     Region          2910..2974
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          3281..3571
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3694..4089
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     CDS             1..4114
                     /gene="LOC107910550"
                     /coded_by="XM_041088232.1:333..12677"
                     /db_xref="GeneID:107910550"
ORIGIN      
        1 mfeaqvlhll rrylgeyvnd lssetlrisv wqgdvvlkdl klkaealnsl nlpvavkagf
       61 vgtitlkvpw kslgnepviv lidrvfvlah ptpdgrnlke edreklfvak iqqieeaeaa
      121 tleaisgskl espppgnswl gsliatiign lkitisnvhi ryedcfsnpg hpfsfgvtla
      181 klaavtmdeq gnetfdtsga ldklrkslql erlamyhdsd nlpwkidkkw edlspkewie
      241 vfedginepa adnevvsmwa mnrnylvspi ngvlkyhrlg nqerknpdip fekaslvlsd
      301 valtiteaqy hdwikllevf sryrayveis hlrpvvpvsk esyvlwwrya amaalhqrkm
      361 cyrfswdqir hmcqlrrryi hlyasmlqqs srvvnieire vekaldskvi llwrllahak
      421 lesvkskeaa eqrrlhkksw ftlgwrtqse dasdgdafdg sqlteerlsk eewrainkll
      481 tyqpnedlms hsgkdmqnmi rffvtvsisr aaariininq teivcgrfeq lhvstkfkhr
      541 nthcdvtlrf ygvsapegsl aqsvcseqkv naltanfvhs pvgenvdwrl satispchvt
      601 vlkesfdrfl efvkrsnavs ptvtletatk lqtkiekvtr raheqfqtvl eeqsrfaldi
      661 dldapkvrip lrarssfkcd shflldfghf tlhtmesqsd eqrqdiyshf yisgrdiaaf
      721 frdcgsdcqd cslmkenssv qsmvmsprle kvdnfyslid rcgmavivdq ikiphtsfps
      781 trvsvqvpnl gihfsparyc rlmellnils famdpcvqpg vvdfqvgvap rsvsdlatda
      841 kilvwrgign svaswqpcfi vlsgyyvyvl dseksqnhlr ylsmagrqvh evpstniggs
      901 pfciavsprg mdtqkaless gtwviefqge eekvtwlrgl iqatyqasdp plvdilgett
      961 dgisesddpq trnskaadlv ingavvetkl ciygetgegv aekleeqlii ellasggkvk
     1021 missaselvl ktklhslkik delqgrlsgn phylacsvlk ydsslesnqt cdlngdemsg
     1081 vhqddddtfk dalsefvsst nsdslshhmd mvdayrfesd evlideqdla qgkglsgeif
     1141 ydaqggddld fvsvtfskkg sgspvydgid skmsirmskl effcnrptlv aligfgfdlg
     1201 svgnktsvtd angtskdkmd kgkaeesgcv egllgydkar vvfylnmdid svtvflnked
     1261 gsqlaifvqe sflldlkvrp aslsiegtlg nmrlrdmtlg tdnwlgwlcd irnpgvesli
     1321 kfkfnsfsgg dddyegynyr lcgrlsavri vflyrfvqei tvyfmelatp hteeviklvd
     1381 kvgdfewliq kseidgaaal kldltfdtpi iivprnstsn efvqldvgll kvrnkiswhg
     1441 fpekdpsavr ldilhaeflg vnmfvgidgc igkpliresr gldvyvrrsl rdvfkkvptf
     1501 slevkidflh gvmsnkeydv irdcitmnln eapslppsfr gsksgskdtm rllvdkvnln
     1561 sqmllsrsvt ilavevnyal lelcngihee splaqialeg lwvsyrmtsl setdlyvtip
     1621 tfsvldiran tkpemrlmlg ssadvpkqas tgnfpcflnk ssssrvnsea gidldvpist
     1681 mfltdcrwrl ssqtyvlrfq qprvlvvpdf llalgeffvp slgaitgree tmnpkndpis
     1741 knnsiilsss iykqnedvvh lsrsrqlvad thgideytyd gcgktivlsd eneakkshpa
     1801 qfcpiviigc gkrlrfvnvk iengsllrky tflsndssys vspeddvdis lmdnlssndd
     1861 ekleenmelt ntpktsclqd gpnvapsftf eaqvvsleft ffdgtksyld dssygekllr
     1921 akmdlnfmya ykendtwira vvkdltvetg sgliildpld isggytsvke ktnislistd
     1981 icihlslgai slllnlqyqa aaalqfgnai plapcinfdr iwvspkengs hnnltiwrpq
     2041 apsnyvilgd cvtsspipps qavlavsnty grvrkpvgfk higflshvlg legvdghsgv
     2101 dsdcslwmpi sppgyismgc vanvgnhppp nhvvyclrsd lvtsttysec llnelpnqhf
     2161 tsgfsiwrld nvlgsfyahs siaypskgns sdlshlllws svwsyaslqe yipdtvdnnh
     2221 ssqqtsnqgd sssgwdilrs iskasscyms tphferiwwd kggglrrpvs iwrpipcpgh
     2281 ailgdciteg leppalgiil ksedpeisak pvqftkvahi tgkgfdevff wypiappgya
     2341 slgcivsrtd eapcmdffcc prmdlvsptn iievpisrnl sskashcwsi wkvenqastf
     2401 larsdikmps mrlaytisds vkhktrenvt aeiklrffsl tvldslhgmm tplfdvtian
     2461 iklvthgrle amnavfissi aastfnkhle aweplvepfd gifkfetydi nvnsssiigk
     2521 rmhiaatniv ninvsamnld tlietilswr rqleldqkat klveesgahs gnqdlafsal
     2581 deedlqtvvv enqlgsdlyi krieqnsevv dqlhhggfas vwvpparfsd rlnvaeesrq
     2641 aryyvaaqil fakdlpivdd gnshnffcal rlvidsqatd qqkllpqsar tkcvkplvsd
     2701 kvypkkgiak wnelfifevp rksqgvakle vevtnlsaka gkgevvgals fpighranil
     2761 kklsssrmlp prndtqnies yslrrkvqsn nvedtyghvk ifvstsyfer nttaifqkda
     2821 esrdasdkdi gfwvrlgseg swesvrsllp lsvvpksfqs efiamevvmr ngkkhaifrg
     2881 latvvndsdv nldisvchvs miqdsgsstp nivveeifen qlyhpisgwg nkwpgfqgsd
     2941 pacwstrdfs csskeffeps lpngwewist wtidksqfvd edgwayaady pnqwpptssk
     3001 shiksghdvv rrrrwirtrq liaekekccv kkdfttinpg ystvlswgst skasdqclri
     3061 rpsvdyphpp yawghtvvva vasnfasgkd qpfvdqcyik stspqgskkp nfalllnqle
     3121 kkdillccsa tvesrqiwls vgadasalht efnhpvydwr isvnsplkle nrlscpaeft
     3181 iwektkdrny ierehgiiss rmsahiysvd iqrpiylsfl vqsdwvlekd pvlildlssg
     3241 ahissfwmih qqskspfmcf crrlrvsver dmggtgaapk tirifvpywi indsalplay
     3301 qvveiegsdn admdsrsska vkstrtvlrt psylaerrhs gprrniqvle aiedtspias
     3361 mlspqdcagr sgvtlftsqk dtyvsprigi avalrdseiy spgisllele kkerfdvkaf
     3421 ssdgyyykls alvnmttdrt kvihlqpyml fvnrvglsfc lqqcysetve wihptdppkl
     3481 fgwqssskae llklqvdgyg wskpfsvste gvmrislknd tgsdhlflki evrsgtkssr
     3541 yevifrpnss sspyrienrs iflpilfqqv dgtsgswhll lpntavsflw edlgrrhlle
     3601 iladgadpsr sgkynideif dhlpidvagp aqalritilk eervnvvkis dwmpeneppv
     3661 iisqtipstl selsrseshq qqpqstsece fhfivefael gvsiidhtpe eilhlslqnv
     3721 hlayssglgs glsrfklrmr giqmdnqlpl tptpvlfrpq kigqetdyil kisvtlqtkg
     3781 sldlsvypyi gfhgpdnsaf linihepiiw rihemmqqvn lsrlsdsntt avsfdpiihi
     3841 gilnisevrl kvsmamspsq rprgvlgfws slmtalgnte nmtvklnqrf henlcmrqsm
     3901 minnaisnik ndllgqplrl lsgldilsna ssalghmskg vaalsmdkkf iqsrqrqgsk
     3961 svedlgdvir egggalakgl frgvtgiltk plegakssgv egfvqgvgkg iigaaaqpvs
     4021 gvldllsktt eganamrlki asaiasdeqi lrrrlpravt gdsllrpyde ykargqvlsl
     4081 liyskyvesl hyqmhmkiis cyqreklswl pige
//
LOCUS       XP_040944167            3602 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944167
VERSION     XP_040944167.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088233.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3602
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=403502
     Region          1..>835
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          139..383
                     /region_name="VPS13"
                     /note="Vacuolar sorting-associated protein 13, N-terminal;
                     pfam16908"
                     /db_xref="CDD:465309"
     Region          2018..>2169
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2254..>2365
                     /region_name="Vps62"
                     /note="Vacuolar protein sorting-associated protein 62;
                     pfam06101"
                     /db_xref="CDD:461828"
     Region          2649..2753
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     Region          2910..2974
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          3281..>3534
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     CDS             1..3602
                     /gene="LOC107910550"
                     /coded_by="XM_041088233.1:339..11147"
                     /db_xref="GeneID:107910550"
ORIGIN      
        1 mfeaqvlhll rrylgeyvnd lssetlrisv wqgdvvlkdl klkaealnsl nlpvavkagf
       61 vgtitlkvpw kslgnepviv lidrvfvlah ptpdgrnlke edreklfvak iqqieeaeaa
      121 tleaisgskl espppgnswl gsliatiign lkitisnvhi ryedcfsnpg hpfsfgvtla
      181 klaavtmdeq gnetfdtsga ldklrkslql erlamyhdsd nlpwkidkkw edlspkewie
      241 vfedginepa adnevvsmwa mnrnylvspi ngvlkyhrlg nqerknpdip fekaslvlsd
      301 valtiteaqy hdwikllevf sryrayveis hlrpvvpvsk esyvlwwrya amaalhqrkm
      361 cyrfswdqir hmcqlrrryi hlyasmlqqs srvvnieire vekaldskvi llwrllahak
      421 lesvkskeaa eqrrlhkksw ftlgwrtqse dasdgdafdg sqlteerlsk eewrainkll
      481 tyqpnedlms hsgkdmqnmi rffvtvsisr aaariininq teivcgrfeq lhvstkfkhr
      541 nthcdvtlrf ygvsapegsl aqsvcseqkv naltanfvhs pvgenvdwrl satispchvt
      601 vlkesfdrfl efvkrsnavs ptvtletatk lqtkiekvtr raheqfqtvl eeqsrfaldi
      661 dldapkvrip lrarssfkcd shflldfghf tlhtmesqsd eqrqdiyshf yisgrdiaaf
      721 frdcgsdcqd cslmkenssv qsmvmsprle kvdnfyslid rcgmavivdq ikiphtsfps
      781 trvsvqvpnl gihfsparyc rlmellnils famdpcvqpg vvdfqvgvap rsvsdlatda
      841 kilvwrgign svaswqpcfi vlsgyyvyvl dseksqnhlr ylsmagrqvh evpstniggs
      901 pfciavsprg mdtqkaless gtwviefqge eekvtwlrgl iqatyqasdp plvdilgett
      961 dgisesddpq trnskaadlv ingavvetkl ciygetgegv aekleeqlii ellasggkvk
     1021 missaselvl ktklhslkik delqgrlsgn phylacsvlk ydsslesnqt cdlngdemsg
     1081 vhqddddtfk dalsefvsst nsdslshhmd mvdayrfesd evlideqdla qgkglsgeif
     1141 ydaqggddld fvsvtfskkg sgspvydgid skmsirmskl effcnrptlv aligfgfdlg
     1201 svgnktsvtd angtskdkmd kgkaeesgcv egllgydkar vvfylnmdid svtvflnked
     1261 gsqlaifvqe sflldlkvrp aslsiegtlg nmrlrdmtlg tdnwlgwlcd irnpgvesli
     1321 kfkfnsfsgg dddyegynyr lcgrlsavri vflyrfvqei tvyfmelatp hteeviklvd
     1381 kvgdfewliq kseidgaaal kldltfdtpi iivprnstsn efvqldvgll kvrnkiswhg
     1441 fpekdpsavr ldilhaeflg vnmfvgidgc igkpliresr gldvyvrrsl rdvfkkvptf
     1501 slevkidflh gvmsnkeydv irdcitmnln eapslppsfr gsksgskdtm rllvdkvnln
     1561 sqmllsrsvt ilavevnyal lelcngihee splaqialeg lwvsyrmtsl setdlyvtip
     1621 tfsvldiran tkpemrlmlg ssadvpkqas tgnfpcflnk ssssrvnsea gidldvpist
     1681 mfltdcrwrl ssqtyvlrfq qprvlvvpdf llalgeffvp slgaitgree tmnpkndpis
     1741 knnsiilsss iykqnedvvh lsrsrqlvad thgideytyd gcgktivlsd eneakkshpa
     1801 qfcpiviigc gkrlrfvnvk iengsllrky tflsndssys vspeddvdis lmdnlssndd
     1861 ekleenmelt ntpktsclqd gpnvapsftf eaqvvsleft ffdgtksyld dssygekllr
     1921 akmdlnfmya ykendtwira vvkdltvetg sgliildpld isggytsvke ktnislistd
     1981 icihlslgai slllnlqyqa aaalqfgnai plapcinfdr iwvspkengs hnnltiwrpq
     2041 apsnyvilgd cvtsspipps qavlavsnty grvrkpvgfk higflshvlg legvdghsgv
     2101 dsdcslwmpi sppgyismgc vanvgnhppp nhvvyclrsd lvtsttysec llnelpnqhf
     2161 tsgfsiwrld nvlgsfyahs siaypskgns sdlshlllws svwsyaslqe yipdtvdnnh
     2221 ssqqtsnqgd sssgwdilrs iskasscyms tphferiwwd kggglrrpvs iwrpipcpgh
     2281 ailgdciteg leppalgiil ksedpeisak pvqftkvahi tgkgfdevff wypiappgya
     2341 slgcivsrtd eapcmdffcc prmdlvsptn iievpisrnl sskashcwsi wkvenqastf
     2401 larsdikmps mrlaytisds vkhktrenvt aeiklrffsl tvldslhgmm tplfdvtian
     2461 iklvthgrle amnavfissi aastfnkhle aweplvepfd gifkfetydi nvnsssiigk
     2521 rmhiaatniv ninvsamnld tlietilswr rqleldqkat klveesgahs gnqdlafsal
     2581 deedlqtvvv enqlgsdlyi krieqnsevv dqlhhggfas vwvpparfsd rlnvaeesrq
     2641 aryyvaaqil fakdlpivdd gnshnffcal rlvidsqatd qqkllpqsar tkcvkplvsd
     2701 kvypkkgiak wnelfifevp rksqgvakle vevtnlsaka gkgevvgals fpighranil
     2761 kklsssrmlp prndtqnies yslrrkvqsn nvedtyghvk ifvstsyfer nttaifqkda
     2821 esrdasdkdi gfwvrlgseg swesvrsllp lsvvpksfqs efiamevvmr ngkkhaifrg
     2881 latvvndsdv nldisvchvs miqdsgsstp nivveeifen qlyhpisgwg nkwpgfqgsd
     2941 pacwstrdfs csskeffeps lpngwewist wtidksqfvd edgwayaady pnqwpptssk
     3001 shiksghdvv rrrrwirtrq liaekekccv kkdfttinpg ystvlswgst skasdqclri
     3061 rpsvdyphpp yawghtvvva vasnfasgkd qpfvdqcyik stspqgskkp nfalllnqle
     3121 kkdillccsa tvesrqiwls vgadasalht efnhpvydwr isvnsplkle nrlscpaeft
     3181 iwektkdrny ierehgiiss rmsahiysvd iqrpiylsfl vqsdwvlekd pvlildlssg
     3241 ahissfwmih qqskspfmcf crrlrvsver dmggtgaapk tirifvpywi indsalplay
     3301 qvveiegsdn admdsrsska vkstrtvlrt psylaerrhs gprrniqvle aiedtspias
     3361 mlspqdcagr sgvtlftsqk dtyvsprigi avalrdseiy spgisllele kkerfdvkaf
     3421 ssdgyyykls alvnmttdrt kvihlqpyml fvnrvglsfc lqqcysetve wihptdppkl
     3481 fgwqssskae llklqvdgyg wskpfsvste gvmrislknd tgsdhlflki evrsgtkssr
     3541 yevifrpnss sspyskwmvp vvhgtsffpi qlflsygkil vdgicwkslq melthqgqas
     3601 ti
//
LOCUS       XP_016693895             509 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase At1g48100 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693895
VERSION     XP_016693895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838406.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..509
                     /product="polygalacturonase At1g48100 isoform X1"
                     /calculated_mol_wt=55129
     Region          107..482
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..509
                     /gene="LOC107910548"
                     /coded_by="XM_016838406.2:540..2069"
                     /db_xref="GeneID:107910548"
ORIGIN      
        1 mwsfsqrgil riisatssgk idlasaycll lmelgrgllf iwilailsfh hcssnanary
       61 hyhkkhkpkg spgkspvhvp appknsdpps ipsdpypndp gdttgsifdv tsygavgdgc
      121 sddtaafmea wkaacavesa tvlvpsdkvf mitstifpgp ckpglalqvd gvlmppdgpd
      181 cwpkadsrqq wlvfyrlndm kltgngvieg ngqkwwdlpc kphrgpngst lpgpcdsptm
      241 irffmssnlv vsgikiqnsp qfhmkfdgce gvlieklvis tpklspntdg ihigntksvg
      301 iynsmisngd dcisigpgcl dvhiegvtcg pshgisigsl gvhnsqacvs nitvrntvir
      361 esdngvrikt wqggtgsvsg isfeniqmen vrncinidqy yclqkaclnq tsavyvrdvq
      421 yrnikgsydv rntpihfacs dtvactnitm advelmpheg elmeepfcwn aygieetlsi
      481 ppigcllkgm phvitessqy scsnengrf
//
LOCUS       XP_016693896             478 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase At1g48100 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693896
VERSION     XP_016693896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838407.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..478
                     /product="polygalacturonase At1g48100 isoform X2"
                     /calculated_mol_wt=51745
     Region          76..451
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..478
                     /gene="LOC107910548"
                     /coded_by="XM_016838407.2:737..2173"
                     /db_xref="GeneID:107910548"
ORIGIN      
        1 melgrgllfi wilailsfhh cssnanaryh yhkkhkpkgs pgkspvhvpa ppknsdppsi
       61 psdpypndpg dttgsifdvt sygavgdgcs ddtaafmeaw kaacavesat vlvpsdkvfm
      121 itstifpgpc kpglalqvdg vlmppdgpdc wpkadsrqqw lvfyrlndmk ltgngviegn
      181 gqkwwdlpck phrgpngstl pgpcdsptmi rffmssnlvv sgikiqnspq fhmkfdgceg
      241 vlieklvist pklspntdgi higntksvgi ynsmisngdd cisigpgcld vhiegvtcgp
      301 shgisigslg vhnsqacvsn itvrntvire sdngvriktw qggtgsvsgi sfeniqmenv
      361 rncinidqyy clqkaclnqt savyvrdvqy rnikgsydvr ntpihfacsd tvactnitma
      421 dvelmphege lmeepfcwna ygieetlsip pigcllkgmp hvitessqys csnengrf
//
LOCUS       XP_040944168             478 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase At1g48100 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944168
VERSION     XP_040944168.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088234.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..478
                     /product="polygalacturonase At1g48100 isoform X2"
                     /calculated_mol_wt=51745
     Region          76..451
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..478
                     /gene="LOC107910548"
                     /coded_by="XM_041088234.1:1120..2556"
                     /db_xref="GeneID:107910548"
ORIGIN      
        1 melgrgllfi wilailsfhh cssnanaryh yhkkhkpkgs pgkspvhvpa ppknsdppsi
       61 psdpypndpg dttgsifdvt sygavgdgcs ddtaafmeaw kaacavesat vlvpsdkvfm
      121 itstifpgpc kpglalqvdg vlmppdgpdc wpkadsrqqw lvfyrlndmk ltgngviegn
      181 gqkwwdlpck phrgpngstl pgpcdsptmi rffmssnlvv sgikiqnspq fhmkfdgceg
      241 vlieklvist pklspntdgi higntksvgi ynsmisngdd cisigpgcld vhiegvtcgp
      301 shgisigslg vhnsqacvsn itvrntvire sdngvriktw qggtgsvsgi sfeniqmenv
      361 rncinidqyy clqkaclnqt savyvrdvqy rnikgsydvr ntpihfacsd tvactnitma
      421 dvelmphege lmeepfcwna ygieetlsip pigcllkgmp hvitessqys csnengrf
//
LOCUS       XP_040944169             184 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944169
VERSION     XP_040944169.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088235.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20879
     Region          102..>184
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     Site            order(105..108,142..143,146,170)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..184
                     /gene="LOC121214494"
                     /coded_by="XM_041088235.1:1..555"
                     /db_xref="GeneID:121214494"
ORIGIN      
        1 mscynisvhk yvqenqmgfl qwlfwdftqs sasqrrtfcv avraiwgdrn nrlhnkgsks
       61 gieigrfvns yileldsvgk nsrqtsitvk kwkkpmdsfv kinfdaayer gqnkadigvv
      121 ardkegsvll scsevhqrvs safgaeaiac rkalqigvhm qwerviiegd slsiikkykt
      181 kkpr
//
LOCUS       XP_016693894             153 aa            linear   PLN 06-AUG-2024
DEFINITION  17.5 kDa class I heat shock protein [Gossypium hirsutum].
ACCESSION   XP_016693894
VERSION     XP_016693894.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838405.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..153
                     /product="17.5 kDa class I heat shock protein"
                     /calculated_mol_wt=17505
     Region          47..138
                     /region_name="ACD_ScHsp26_like"
                     /note="Alpha crystallin domain (ACD) found in
                     Saccharomyces cerevisiae (Sc) small heat shock protein
                     (Hsp)26 and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally active as...;
                     cd06472"
                     /db_xref="CDD:107229"
     Site            order(47..53,60,62,64..65,87,92,95..103,105,110,129..131)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:107229"
     CDS             1..153
                     /gene="LOC107910546"
                     /coded_by="XM_016838405.2:377..838"
                     /db_xref="GeneID:107910546"
ORIGIN      
        1 msliprffgn rrsnvfdpfs ldvwdpfrdf avstkrtpet safvdtridw ketpeahvfk
       61 advpglkkee vkvevvddrv lqisgernve kedkndtwhr verssgkfmr rfrlpenakm
      121 dqvkasmeng vltvtvpklv vkkpdvkave isg
//
LOCUS       XP_016693893              91 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693893
VERSION     XP_016693893.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838404.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..91
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10452
     Region          16..73
                     /region_name="Complex1_LYR_SF"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     Complex1_LYR-like superfamily; cd20251"
                     /db_xref="CDD:380755"
     Site            19..21
                     /site_type="other"
                     /note="LYR motif"
                     /db_xref="CDD:380755"
     CDS             1..91
                     /gene="LOC107910545"
                     /coded_by="XM_016838404.2:130..405"
                     /db_xref="GeneID:107910545"
ORIGIN      
        1 mpslqtalpp elannvirly reclrrakyi ghkqhntalv vdmvrqqfkk hmhetdpeki
       61 qklkddaarg linhilyese klsgrkfsns s
//
LOCUS       XP_016693890             716 aa            linear   PLN 06-AUG-2024
DEFINITION  boron transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016693890
VERSION     XP_016693890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="boron transporter 1"
                     /calculated_mol_wt=80007
     Region          <7..603
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..716
                     /gene="LOC107910544"
                     /coded_by="XM_016838401.2:289..2439"
                     /db_xref="GeneID:107910544"
ORIGIN      
        1 meesfvpfrg ikndlegrlk cykqdwtsgl ragfrilapt tyiffasaip visfgeqler
       61 etdgiltavq tlastalcgi ihsiiggqpl lilgvaeptv imytfmfnfa knrpdlgsel
      121 flawtawvcv wtaillflla ilgacsiinr ftrlagelfg lliamlfmqe aikglvdefr
      181 iperenpkll efqpswrfan gmfalvlsfg llftalrsrk arswrygsgs lrgfiadygv
      241 plmilvwtav syipagstpk giprrlfspn pwspgayenw tvmkdmlkvp vlyiigafip
      301 atmlavlyyf dhsvasqlaq qkefnlrkpp sfhydllllg fltilcglig vppangvipq
      361 spmhtkslat lkhqllrnri vetarkcmhn naslgqvyds mqeayqqmqs plvyqepsar
      421 glkelkesti qmastmgsid apvdetvfdv ekeiddllpi evkeqrlsnl lqatmvggcl
      481 aampfikkip tsvlwgyfaf maieslpgnq fwerilllft apsrrykvle eyhatfvetv
      541 pfktiavfti fqtayllvcf gmtwiplagv lfplmimllv pvrqyilpkf fkgvhlqdld
      601 aaeyeespav pfslvtegel irtasfaddg eildgmftrs kgeirrissl kvtsatatps
      661 kefkgteies prfseqgysp rvnelragrr sprnvgrgpf sprtsevrps nlgksg
//
LOCUS       XP_016693892             716 aa            linear   PLN 06-AUG-2024
DEFINITION  boron transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016693892
VERSION     XP_016693892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838403.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="boron transporter 1"
                     /calculated_mol_wt=80007
     Region          <7..603
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..716
                     /gene="LOC107910544"
                     /coded_by="XM_016838403.2:424..2574"
                     /db_xref="GeneID:107910544"
ORIGIN      
        1 meesfvpfrg ikndlegrlk cykqdwtsgl ragfrilapt tyiffasaip visfgeqler
       61 etdgiltavq tlastalcgi ihsiiggqpl lilgvaeptv imytfmfnfa knrpdlgsel
      121 flawtawvcv wtaillflla ilgacsiinr ftrlagelfg lliamlfmqe aikglvdefr
      181 iperenpkll efqpswrfan gmfalvlsfg llftalrsrk arswrygsgs lrgfiadygv
      241 plmilvwtav syipagstpk giprrlfspn pwspgayenw tvmkdmlkvp vlyiigafip
      301 atmlavlyyf dhsvasqlaq qkefnlrkpp sfhydllllg fltilcglig vppangvipq
      361 spmhtkslat lkhqllrnri vetarkcmhn naslgqvyds mqeayqqmqs plvyqepsar
      421 glkelkesti qmastmgsid apvdetvfdv ekeiddllpi evkeqrlsnl lqatmvggcl
      481 aampfikkip tsvlwgyfaf maieslpgnq fwerilllft apsrrykvle eyhatfvetv
      541 pfktiavfti fqtayllvcf gmtwiplagv lfplmimllv pvrqyilpkf fkgvhlqdld
      601 aaeyeespav pfslvtegel irtasfaddg eildgmftrs kgeirrissl kvtsatatps
      661 kefkgteies prfseqgysp rvnelragrr sprnvgrgpf sprtsevrps nlgksg
//
LOCUS       XP_016693887             702 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive DNA (cytosine-5)-methyltransferase DRM3
            [Gossypium hirsutum].
ACCESSION   XP_016693887
VERSION     XP_016693887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838398.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..702
                     /product="probable inactive DNA
                     (cytosine-5)-methyltransferase DRM3"
                     /calculated_mol_wt=78382
     Region          209..245
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          580..>693
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..702
                     /gene="LOC107910543"
                     /coded_by="XM_016838398.2:305..2413"
                     /db_xref="GeneID:107910543"
ORIGIN      
        1 msrymngkss sqegktpivp kpemldfdfp edalysqhvg dnvasssgsn vrsffigmgf
       61 lpalvdkviq ekgeddadll letlteysdt qkansqssgy lnslfvdkda snfpqianyi
      121 qpkeepdvdv fdedlidkra sllmmnfsvd evefaldklg edapinelvd fitaaqiaek
      181 leeesedsls ceeendqnat netlfgtmek tlsllemgfs enevsiaiek fgsdvpitel
      241 adamftghls rsyieskklk saasgsglih nvneredikt edcsttpvpq sgninlgess
      301 skgkrpkees ldgipvsnpq mkqslnekkl egkrpkqdhv gnassfidpp wleekidpnv
      361 ipsfevprpv ksnscksvnk vvakppyfly gnvvnlpydg wvkisqflyg iepefvntqs
      421 fsafnrnegy vhnlpaenrf hilpksplti qdaipntkkw wpswdprkql ncmgsevlga
      481 sklcarlgnm ladsrgllss dqqkyilrqc qisnliwvgl nklclaqpeh werilgypsd
      541 htrplendlt qrlhllqqsf qtdtlgyhls vlkpiypggl tmlsvfsgig gaaislhrlg
      601 ihlkgvvave tseakqkill nwwqntgqtg elviiediqk ltskrlesli dklgsidfvi
      661 cqnsnmkste edtlpgfdfs lfnefvrvlq rvrsmmqrrr ss
//
LOCUS       XP_016693888             702 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive DNA (cytosine-5)-methyltransferase DRM3
            [Gossypium hirsutum].
ACCESSION   XP_016693888
VERSION     XP_016693888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..702
                     /product="probable inactive DNA
                     (cytosine-5)-methyltransferase DRM3"
                     /calculated_mol_wt=78382
     Region          209..245
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          580..>693
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..702
                     /gene="LOC107910543"
                     /coded_by="XM_016838399.2:277..2385"
                     /db_xref="GeneID:107910543"
ORIGIN      
        1 msrymngkss sqegktpivp kpemldfdfp edalysqhvg dnvasssgsn vrsffigmgf
       61 lpalvdkviq ekgeddadll letlteysdt qkansqssgy lnslfvdkda snfpqianyi
      121 qpkeepdvdv fdedlidkra sllmmnfsvd evefaldklg edapinelvd fitaaqiaek
      181 leeesedsls ceeendqnat netlfgtmek tlsllemgfs enevsiaiek fgsdvpitel
      241 adamftghls rsyieskklk saasgsglih nvneredikt edcsttpvpq sgninlgess
      301 skgkrpkees ldgipvsnpq mkqslnekkl egkrpkqdhv gnassfidpp wleekidpnv
      361 ipsfevprpv ksnscksvnk vvakppyfly gnvvnlpydg wvkisqflyg iepefvntqs
      421 fsafnrnegy vhnlpaenrf hilpksplti qdaipntkkw wpswdprkql ncmgsevlga
      481 sklcarlgnm ladsrgllss dqqkyilrqc qisnliwvgl nklclaqpeh werilgypsd
      541 htrplendlt qrlhllqqsf qtdtlgyhls vlkpiypggl tmlsvfsgig gaaislhrlg
      601 ihlkgvvave tseakqkill nwwqntgqtg elviiediqk ltskrlesli dklgsidfvi
      661 cqnsnmkste edtlpgfdfs lfnefvrvlq rvrsmmqrrr ss
//
LOCUS       XP_040944170             702 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive DNA (cytosine-5)-methyltransferase DRM3
            [Gossypium hirsutum].
ACCESSION   XP_040944170
VERSION     XP_040944170.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088236.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..702
                     /product="probable inactive DNA
                     (cytosine-5)-methyltransferase DRM3"
                     /calculated_mol_wt=78382
     Region          209..245
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          580..>693
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..702
                     /gene="LOC107910543"
                     /coded_by="XM_041088236.1:240..2348"
                     /db_xref="GeneID:107910543"
ORIGIN      
        1 msrymngkss sqegktpivp kpemldfdfp edalysqhvg dnvasssgsn vrsffigmgf
       61 lpalvdkviq ekgeddadll letlteysdt qkansqssgy lnslfvdkda snfpqianyi
      121 qpkeepdvdv fdedlidkra sllmmnfsvd evefaldklg edapinelvd fitaaqiaek
      181 leeesedsls ceeendqnat netlfgtmek tlsllemgfs enevsiaiek fgsdvpitel
      241 adamftghls rsyieskklk saasgsglih nvneredikt edcsttpvpq sgninlgess
      301 skgkrpkees ldgipvsnpq mkqslnekkl egkrpkqdhv gnassfidpp wleekidpnv
      361 ipsfevprpv ksnscksvnk vvakppyfly gnvvnlpydg wvkisqflyg iepefvntqs
      421 fsafnrnegy vhnlpaenrf hilpksplti qdaipntkkw wpswdprkql ncmgsevlga
      481 sklcarlgnm ladsrgllss dqqkyilrqc qisnliwvgl nklclaqpeh werilgypsd
      541 htrplendlt qrlhllqqsf qtdtlgyhls vlkpiypggl tmlsvfsgig gaaislhrlg
      601 ihlkgvvave tseakqkill nwwqntgqtg elviiediqk ltskrlesli dklgsidfvi
      661 cqnsnmkste edtlpgfdfs lfnefvrvlq rvrsmmqrrr ss
//
LOCUS       XP_016693884             654 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT4 [Gossypium hirsutum].
ACCESSION   XP_016693884
VERSION     XP_016693884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..654
                     /product="YTH domain-containing protein ECT4"
                     /calculated_mol_wt=71767
     Region          326..468
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..654
                     /gene="LOC107910541"
                     /coded_by="XM_016838395.2:245..2209"
                     /db_xref="GeneID:107910541"
ORIGIN      
        1 myqegapeiv idqgmyypta tnygyyctgf espvewedhq nifsadgpdv qfagaqtepl
       61 pyvyytpsyg yaqspynpyn pyipgavvgd gsfvgaqqyy pfppyqnpvs ptayvpvliq
      121 pdgipssstd sfldthasig trpdgrgvry nlasasaaas rksapnqads lsrvtdgqsk
      181 hyaiqesisa ssgsasarah qvrvasgsvq pignipggkl psyrnqlktd lpvgnaisdy
      241 gasspgrgvl drlrpkihvs rvfndahgsl dswaeqnrgp rtnrsknqlm vkaytskagn
      301 sdaegniiiy tdqynkddfp idyveakffv iksyseddvh ksikynvwss tphgnkklgs
      361 afedaekiaa gkpsgcpifl ffsvnasgqf cgvaemigpv dfqkdmdfwq qdkwsgsfpv
      421 kwhiikdvpn shfrhiilgn nenkpvtnsr dtqeimykqg memlkvfknh amktsllddf
      481 mfyenrqrim qeekamqlik sienpvlapa fdpvnklnrv elllnehers skqsdpellr
      541 tivpssnqpv stdcdrtnar rmnessgkia veakddastl kisslsinpk qdeskistda
      601 atksdavevv nigsvtvkvn kftdspgflt vgtiplnpkt pqldeggvsa kkgt
//
LOCUS       XP_016693885             654 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT4 [Gossypium hirsutum].
ACCESSION   XP_016693885
VERSION     XP_016693885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838396.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..654
                     /product="YTH domain-containing protein ECT4"
                     /calculated_mol_wt=71767
     Region          326..468
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..654
                     /gene="LOC107910541"
                     /coded_by="XM_016838396.2:191..2155"
                     /db_xref="GeneID:107910541"
ORIGIN      
        1 myqegapeiv idqgmyypta tnygyyctgf espvewedhq nifsadgpdv qfagaqtepl
       61 pyvyytpsyg yaqspynpyn pyipgavvgd gsfvgaqqyy pfppyqnpvs ptayvpvliq
      121 pdgipssstd sfldthasig trpdgrgvry nlasasaaas rksapnqads lsrvtdgqsk
      181 hyaiqesisa ssgsasarah qvrvasgsvq pignipggkl psyrnqlktd lpvgnaisdy
      241 gasspgrgvl drlrpkihvs rvfndahgsl dswaeqnrgp rtnrsknqlm vkaytskagn
      301 sdaegniiiy tdqynkddfp idyveakffv iksyseddvh ksikynvwss tphgnkklgs
      361 afedaekiaa gkpsgcpifl ffsvnasgqf cgvaemigpv dfqkdmdfwq qdkwsgsfpv
      421 kwhiikdvpn shfrhiilgn nenkpvtnsr dtqeimykqg memlkvfknh amktsllddf
      481 mfyenrqrim qeekamqlik sienpvlapa fdpvnklnrv elllnehers skqsdpellr
      541 tivpssnqpv stdcdrtnar rmnessgkia veakddastl kisslsinpk qdeskistda
      601 atksdavevv nigsvtvkvn kftdspgflt vgtiplnpkt pqldeggvsa kkgt
//
LOCUS       XP_016693886             654 aa            linear   PLN 06-AUG-2024
DEFINITION  YTH domain-containing protein ECT4 [Gossypium hirsutum].
ACCESSION   XP_016693886
VERSION     XP_016693886.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838397.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..654
                     /product="YTH domain-containing protein ECT4"
                     /calculated_mol_wt=71767
     Region          326..468
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..654
                     /gene="LOC107910541"
                     /coded_by="XM_016838397.2:575..2539"
                     /db_xref="GeneID:107910541"
ORIGIN      
        1 myqegapeiv idqgmyypta tnygyyctgf espvewedhq nifsadgpdv qfagaqtepl
       61 pyvyytpsyg yaqspynpyn pyipgavvgd gsfvgaqqyy pfppyqnpvs ptayvpvliq
      121 pdgipssstd sfldthasig trpdgrgvry nlasasaaas rksapnqads lsrvtdgqsk
      181 hyaiqesisa ssgsasarah qvrvasgsvq pignipggkl psyrnqlktd lpvgnaisdy
      241 gasspgrgvl drlrpkihvs rvfndahgsl dswaeqnrgp rtnrsknqlm vkaytskagn
      301 sdaegniiiy tdqynkddfp idyveakffv iksyseddvh ksikynvwss tphgnkklgs
      361 afedaekiaa gkpsgcpifl ffsvnasgqf cgvaemigpv dfqkdmdfwq qdkwsgsfpv
      421 kwhiikdvpn shfrhiilgn nenkpvtnsr dtqeimykqg memlkvfknh amktsllddf
      481 mfyenrqrim qeekamqlik sienpvlapa fdpvnklnrv elllnehers skqsdpellr
      541 tivpssnqpv stdcdrtnar rmnessgkia veakddastl kisslsinpk qdeskistda
      601 atksdavevv nigsvtvkvn kftdspgflt vgtiplnpkt pqldeggvsa kkgt
//
LOCUS       XP_040944171            1152 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 46 [Gossypium hirsutum].
ACCESSION   XP_040944171
VERSION     XP_040944171.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088237.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1152
                     /product="DEAD-box ATP-dependent RNA helicase 46"
                     /calculated_mol_wt=125719
     Region          22..52
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          <146..>370
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <150..225
                     /region_name="Activator_LAG-3"
                     /note="Transcriptional activator LAG-3; pfam11498"
                     /db_xref="CDD:151935"
     Region          437..862
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(504..510,611)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..1152
                     /gene="LOC107910540"
                     /coded_by="XM_041088237.1:374..3832"
                     /db_xref="GeneID:107910540"
ORIGIN      
        1 mttaeaaaan lgpryapddp tlpkpwkgli dgttgllyyw npennvtqye rptilppplp
       61 lgpppavstp kltpisvahs aqpngavaqm sqvqvvqgak qlgqqmsqla qqqgqivgqq
      121 qgsmvaqvtd qqgaqqpgpq mgqqgqfipq qhrpqamqhp nqqmmsqigq qtmqhqnsqm
      181 aqpqgqqyah qhlqymayqq svlpqgqqss qqlaphgaqh qgqqypnred ykaavpkked
      241 vdfqlgnqtg fspaqfqqmg tssqnhsagt nsvqtppagl ysgqqqqftg ssvnmqqpts
      301 mthsqqtgtd lvqrqqghrf qnqmgpsviq ssmpppglnt gyedklhgrs gndyyfsgsk
      361 dgqmmgpqqp slsaipmetr msglphqnvl ghgggfnavg ghavhnmygh agppypnnal
      421 irppfvasad anhlspaday rkqhevtatg dnvpapfirf edtgfppeil reihsagfss
      481 ptpiqaqtwp ialqsrdiva iaktgsgktl gylipafmll rqrhnnplng ptvlvlaptr
      541 elatqiqeea ikfgrssrvs ctclyggapk anqlkeldrg adivvatpgr lndilemkki
      601 efgqvsllvl deadrmldmg fepqirkivn eipprrqtlm ytatwpkevr kiagdllvnp
      661 vqvnigsvde laanksitqy vevvpqmeke rrleqvlqaq ergskviifc stkrlcdqla
      721 rslgrnfgav afhgdksqne rdwvlsqfrt gkspilvatd vaargldikd vrvvinfdfp
      781 tgiedyvhri grtgragatg vsftffseqd wkyapdliqv leranqhvpp evreiasrgg
      841 pcfgkdrggm nrfnspsgsg grwdsggrgg mrdggfggrg gmrdggfggr ggmrdgfgsr
      901 ggmrdsgfgg pggrgdpfsg rgnrgglgfg gpagghvgwg rnerslhdqy nsfdgrgrgr
      961 grgrgrfdnr rgigdrsrgr sysrspdmvr twrrsrsrsr srsgsrswsr ssrsrsrsrs
     1021 rswsrgrsrs ysrspgrgrs rshshgrrsr srshsyerkd vakrafdspp asnehnlqqk
     1081 dvakrafdsp ppsnkqnleq kdvakqafds pgaqgnsvpe nnsieplqtv giselpqgee
     1141 gagkvhesvt ep
//
LOCUS       XP_016691035             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691035
VERSION     XP_016691035.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835546.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14306
     CDS             1..119
                     /gene="LOC107908369"
                     /coded_by="XM_016835546.2:62..421"
                     /db_xref="GeneID:107908369"
ORIGIN      
        1 mkrmiylitk akwkksskrk ekrfrkrmra kmgmirvrqq trmqcssiva emeklqeeva
       61 lkreetsalr qqqlreeetk veailqnlnq qrllnarllf qhschqqlld llirhflgd
//
LOCUS       XP_016691036             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691036
VERSION     XP_016691036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=12064
     CDS             1..105
                     /gene="LOC107908369"
                     /coded_by="XM_016835547.2:83..400"
                     /db_xref="GeneID:107908369"
ORIGIN      
        1 meeiikkegk eipqahesed gndqsqttnt cssivaemek lqeevalkre etsalrqqql
       61 reeetkveai lqnlnqqrll narllfqhsc hqqlldllir hflgd
//
LOCUS       XP_040944172             374 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member on chromosome X isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040944172
VERSION     XP_040944172.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088238.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..374
                     /product="dehydrogenase/reductase SDR family member on
                     chromosome X isoform X1"
                     /calculated_mol_wt=41662
     Region          62..348
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(67,69..70,72,91..93,152..154,207..209,230,240,
                     270..273)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(174,209,230,240)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..374
                     /gene="LOC121214496"
                     /coded_by="XM_041088238.1:315..1439"
                     /db_xref="GeneID:121214496"
ORIGIN      
        1 mikelkealr faasisfwrm avfwtislfi syfqlhtnwi fsrrlqsypr crppiseslt
       61 pvciitgats glgaaaahal sregffvvlv grsshllski mteiktqnkd ahvkafvvdl
      121 asfqsilefk sslqqwlldc klhcslqlli nnagilatss rttpegydqm mgtnyigpfc
      181 ltklllpllk rspvpsrivn vtsfthrsvf dvqvdkesvy gtrflrseqy pfarlyeysk
      241 lflilfsyel hrqlglmdqp yhvsvnaadp gsvktnimre vpsclsslaf qvlkssgllq
      301 spkngvssli daalappeas gvyffggkgr tvdssvlshn tklakelwdi sdnlfmeasl
      361 afketasses dnwl
//
LOCUS       XP_040944173             304 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydrogenase/reductase SDR family member on chromosome X isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_040944173
VERSION     XP_040944173.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088239.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..304
                     /product="dehydrogenase/reductase SDR family member on
                     chromosome X isoform X2"
                     /calculated_mol_wt=34536
     Region          62..>255
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(174,209,230,240)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..304
                     /gene="LOC121214496"
                     /coded_by="XM_041088239.1:325..1239"
                     /db_xref="GeneID:121214496"
ORIGIN      
        1 mikelkealr faasisfwrm avfwtislfi syfqlhtnwi fsrrlqsypr crppiseslt
       61 pvciitgats glgaaaahal sregffvvlv grsshllski mteiktqnkd ahvkafvvdl
      121 asfqsilefk sslqqwlldc klhcslqlli nnagilatss rttpegydqm mgtnyigpfc
      181 ltklllpllk rspvpsrivn vtsfthrsvf dvqvdkesvy gtrflrseqy pfarlyeysk
      241 lflilfsyel hrqlglmdqp yhvsccgswk cknqyhegsp fvsfefgiss fevfgpfavt
      301 kewg
//
LOCUS       XP_016693880            1094 aa            linear   PLN 06-AUG-2024
DEFINITION  importin beta-like SAD2 homolog [Gossypium hirsutum].
ACCESSION   XP_016693880
VERSION     XP_016693880.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838391.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693880.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1094
                     /product="importin beta-like SAD2 homolog"
                     /calculated_mol_wt=120930
     Region          1..>405
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     CDS             1..1094
                     /gene="LOC107910536"
                     /coded_by="XM_016838391.2:213..3497"
                     /db_xref="GeneID:107910536"
ORIGIN      
        1 mdltqiaqll dqtlspdghv vrtstealdr lsslpqfpfa llsiaaggqn qgqrvaasty
       61 lknfarrnie vshgsssrvs qefksqlmrt llqaeasvlk vlveafriiv vaefvkqnsw
      121 pelvpdlrsa iqssnvlsng asselstint ltvlhalvrp fqyflspkva kepvppqlel
      181 iakeilapll tvfhhlveka ranhgrkdle tekilllick clyfavrsym psavapllss
      241 fchdlifilg slsldhgdts edeyllrlkt gkrallifcs lttrhrkycd klmqeiincv
      301 lkivkcssni skldflseri vslafdaish vletgpgwrl vsphfsflle sailpalmln
      361 ekdmsewedd peeyirknlp seleeisgwr edlftarksa inllgvvsms kgpptvssnn
      421 gssasskrkk geknkknnqr sigellvlpy lskfpipsda tasdpkilkd yfgflmaygg
      481 lqdflkeqkp aftttlvntr vlplyslsfc ppylvaaasw vlgelasclp eemsadiyss
      541 llkalampdk adtscypvrv aaagaiagll eneylppewl pllqvvisri gnedeeniil
      601 fqllnsivea gnentaihip hiisslvdvi sksihpsvep wphvvvrgfe alavmaqswe
      661 nfmleeveqn dssekkasgq gaiaralsal lqqawltvpl eaeasppasc idhsstllrs
      721 iilsvtgssv ivelklsell lvwadmisdw haweesedma vfdcikevvs lhskyglesf
      781 ivrqippapa ppvpqrsiie aisvfvseai lqypsatwra fscvhillhv pkyssetegv
      841 rlslaavfcr aafshlkgvr skppslwkpl llaiascylc hpdtveaile kegdggfatw
      901 asamafacth sseaglsaks eiklmvmtll kmterllgvg npsggllrdc ftsliktsiq
      961 lkeldeemee eendeesedy dnddededed ddeieiddee seseheetee qfleryaqaa
     1021 salengtvee gdaedqevei elggleeade qkmvlslieg yhhvlikgqa lspelvssfi
     1081 nafpdstsff hqym
//
LOCUS       XP_016693876             315 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ and MATH domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016693876
VERSION     XP_016693876.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838387.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693876.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..315
                     /product="BTB/POZ and MATH domain-containing protein 6"
                     /calculated_mol_wt=35638
     Region          23..157
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(75,126..128)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          181..307
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     CDS             1..315
                     /gene="LOC107910532"
                     /coded_by="XM_016838387.2:40..987"
                     /db_xref="GeneID:107910532"
ORIGIN      
        1 manlvysnle evgrciseaa prhyiikims fsllaktgid kyesgefeag gykwklvlyp
       61 hgnksrnvke hlslylvfad vaslirldse vhavfrffll dqtkdnylvv hdaagkerpf
      121 hrsmhqwgfd qlipirsfnd vgngylldds cvfgaevfvt kemssgkgec lsmikdalss
      181 khlwkienfs nldseynesq qffaanhkwk ihlfprgrrh elgthismyl aladsatlld
      241 gskifaeftl rildqqqsrh iagkvshwfs sssqesgfen fvslayfyha ssgclvkdic
      301 mveaevtvha vsntl
//
LOCUS       XP_016693877             235 aa            linear   PLN 06-AUG-2024
DEFINITION  EEF1A lysine methyltransferase 4 [Gossypium hirsutum].
ACCESSION   XP_016693877
VERSION     XP_016693877.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838388.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..235
                     /product="EEF1A lysine methyltransferase 4"
                     /calculated_mol_wt=26253
     Region          28..162
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..235
                     /gene="LOC107910534"
                     /coded_by="XM_016838388.2:251..958"
                     /db_xref="GeneID:107910534"
ORIGIN      
        1 mtlgtpssqa ygepwywdnr yahesapfdw yqkypalasl ihlyvphrhe rilvvgcgns
       61 vfsedmvndg yedvvnvdis svvieamqtk ysncqqlkyi kldvrdmspf qagsfaavid
      121 kgtldsilcg nnsrqnatqm lgevwrvlkd kgvyilityg apvyrlgllk escmwsiklh
      181 viakfgaegs seqptraltd pilldesgss vedvlgknpd vhyiyvctke pktkd
//
LOCUS       XP_040944175             118 aa            linear   PLN 06-AUG-2024
DEFINITION  autophagy-related protein 8i [Gossypium hirsutum].
ACCESSION   XP_040944175
VERSION     XP_040944175.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088241.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..118
                     /product="autophagy-related protein 8i"
                     /calculated_mol_wt=13643
     Region          15..118
                     /region_name="ATG8"
                     /note="Autophagy protein Atg8 ubiquitin like; pfam02991"
                     /db_xref="CDD:281049"
     CDS             1..118
                     /gene="LOC107910535"
                     /coded_by="XM_041088241.1:378..734"
                     /db_xref="GeneID:107910535"
ORIGIN      
        1 mvkrqpflke qsleqrlees ktilakypdr ipviierysr tdlpdieknm flvprdmlvg
       61 qfihilssrl hlspgkahfv fvhntlpqsv slmgcvynsf kdddgflymc ysteetfg
//
LOCUS       XP_040944176             118 aa            linear   PLN 06-AUG-2024
DEFINITION  autophagy-related protein 8i [Gossypium hirsutum].
ACCESSION   XP_040944176
VERSION     XP_040944176.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088242.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..118
                     /product="autophagy-related protein 8i"
                     /calculated_mol_wt=13643
     Region          15..118
                     /region_name="ATG8"
                     /note="Autophagy protein Atg8 ubiquitin like; pfam02991"
                     /db_xref="CDD:281049"
     CDS             1..118
                     /gene="LOC107910535"
                     /coded_by="XM_041088242.1:416..772"
                     /db_xref="GeneID:107910535"
ORIGIN      
        1 mvkrqpflke qsleqrlees ktilakypdr ipviierysr tdlpdieknm flvprdmlvg
       61 qfihilssrl hlspgkahfv fvhntlpqsv slmgcvynsf kdddgflymc ysteetfg
//
LOCUS       XP_016693874            1040 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016693874
VERSION     XP_016693874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1040
                     /product="squamosa promoter-binding-like protein 1"
                     /calculated_mol_wt=115558
     Region          158..231
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     Region          <809..929
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          810..860
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(811..812,815..817,819..820,824,827,860,862,864,868,
                     870,873..875,877..878,882,885,900,902,904,908..909,
                     912..914,916..917,921)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          862..900
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..1040
                     /gene="LOC107910530"
                     /coded_by="XM_016838385.2:786..3908"
                     /db_xref="GeneID:107910530"
ORIGIN      
        1 megkfggkpr hfygptasdl kaaekksvew dlndwkwdgd lftatplnpv psdcrsrrlf
       61 pdgpetapna gsshsssscs ehsspgnekg krkmqnkkra vvvldddddn ddddddgvkg
      121 dagslklqlg gqvypimded akcgkktkvt gtpcravcqv edcradlska kdyhrrhkvc
      181 dvhskatkal vgnamqrfcq qcsrfhvlqe fdegkrscrr rlaghnrrrr kthpdnlpta
      241 nslndernss fllisllril ssmhsnnsdq akdqdlvahl lrslanvacs tngrnlsgfl
      301 qgfhgaanag rslgnlekpt dvvsgstehv rpsgsaskid dcanlaewqg amgycgtvpt
      361 sdlahrrann daqdgilsgs psrtliwsga gfqprasetg dtveriridk idlnnvydds
      421 qdyvenlers lvlknpvngs lhssvgvpes lkssppqlsk nsdltpsqsp stsggeaqsr
      481 tdrivfklfg knpndfpial rrqilewlsh spadiesyir pgciiltiyl rlresaweel
      541 cydlgsslrk lvdvsndsfw ktgwvyarvq hsvafiyngr vvldaplplk shrnckissi
      601 kpiavsvter aqfvvkgfnl nqsstrllca vegkylvqet cydlmdavdp ineqdklqhl
      661 cflcsipnvs grgfievedf glsstffpfi vaeqevcsei ctlegvieta vptvdinkke
      721 ekmeirnqal dfihemgwll hrnhlnrklg dvnpnlnlfp frrfkwlmef smdhdwcavv
      781 kkllgilfdg tvdlgdhssm efalldmcll hkavrrncrp mvelllryvp nevldkpgsk
      841 qklsvdgndy gfmfkpnvvg pagltplhmv asregcenvl daltddpglv aieawksaqd
      901 stgltpndya rlqghysyih lvqrkinkks ecgyivldip gtpldcnskq klsdgtrsam
      961 avsleiqkik kkarqdgcka cekklaygnr rtslvyrptm lsmvaiaavc vcvallfkss
     1021 pevlyvfrpf rwellkygss
//
LOCUS       XP_016693871             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_016693871
VERSION     XP_016693871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838382.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..495
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=55431
     Region          179..445
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,255,299,301,
                     303..304,306,317,320,337..340)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,299,301,
                     303..304,306,317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(183,253,255,299,301,303,320,337..340)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(316..323,333..340)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..495
                     /gene="LOC107910527"
                     /coded_by="XM_016838382.2:675..2162"
                     /db_xref="GeneID:107910527"
ORIGIN      
        1 masdlnktls keyiglqlwv liviclgvvf lvilsislwl sfrkksrran vmlpltqvpy
       61 vseeikeirv dqasanngnt lnekfsdkgs ekglfnvdng edsgqsgsfn hvdkdvkgsq
      121 pgeegptgtv styrpssnpl tapsplsglp efsrlgwghw ftlrdlhlat nrfskdniig
      181 dggygvvyrg nlingtpvav kkllnnpgqa dkdfrvevea ighvrhknlv rllgyciegt
      241 qrllvyeyvn ngnleqwlrg dmsdkgyltw earikillgt akalaylhea iepkvvhrdi
      301 kssniliddn fdakisdfgl akllgdgksy ittrvmgtfg yvapeyansg llneksdvys
      361 fgvvlleait grypidygrp qpevnmvewl kmmvqlrrse evvdpnietr pstsalkral
      421 ltalrcvdpd adkrpkmsqv armleaeeyp lpredrrrrr nqsvnsdadt qrknsdadrs
      481 ddpdlrlesr mhhhp
//
LOCUS       XP_040944177             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_040944177
VERSION     XP_040944177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088243.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..495
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=55431
     Region          179..445
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,255,299,301,
                     303..304,306,317,320,337..340)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,299,301,
                     303..304,306,317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(183,253,255,299,301,303,320,337..340)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(316..323,333..340)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..495
                     /gene="LOC107910527"
                     /coded_by="XM_041088243.1:272..1759"
                     /db_xref="GeneID:107910527"
ORIGIN      
        1 masdlnktls keyiglqlwv liviclgvvf lvilsislwl sfrkksrran vmlpltqvpy
       61 vseeikeirv dqasanngnt lnekfsdkgs ekglfnvdng edsgqsgsfn hvdkdvkgsq
      121 pgeegptgtv styrpssnpl tapsplsglp efsrlgwghw ftlrdlhlat nrfskdniig
      181 dggygvvyrg nlingtpvav kkllnnpgqa dkdfrvevea ighvrhknlv rllgyciegt
      241 qrllvyeyvn ngnleqwlrg dmsdkgyltw earikillgt akalaylhea iepkvvhrdi
      301 kssniliddn fdakisdfgl akllgdgksy ittrvmgtfg yvapeyansg llneksdvys
      361 fgvvlleait grypidygrp qpevnmvewl kmmvqlrrse evvdpnietr pstsalkral
      421 ltalrcvdpd adkrpkmsqv armleaeeyp lpredrrrrr nqsvnsdadt qrknsdadrs
      481 ddpdlrlesr mhhhp
//
LOCUS       XP_040944178             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_040944178
VERSION     XP_040944178.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088244.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..495
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=55431
     Region          179..445
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,255,299,301,
                     303..304,306,317,320,337..340)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,299,301,
                     303..304,306,317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(183,253,255,299,301,303,320,337..340)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(316..323,333..340)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..495
                     /gene="LOC107910527"
                     /coded_by="XM_041088244.1:174..1661"
                     /db_xref="GeneID:107910527"
ORIGIN      
        1 masdlnktls keyiglqlwv liviclgvvf lvilsislwl sfrkksrran vmlpltqvpy
       61 vseeikeirv dqasanngnt lnekfsdkgs ekglfnvdng edsgqsgsfn hvdkdvkgsq
      121 pgeegptgtv styrpssnpl tapsplsglp efsrlgwghw ftlrdlhlat nrfskdniig
      181 dggygvvyrg nlingtpvav kkllnnpgqa dkdfrvevea ighvrhknlv rllgyciegt
      241 qrllvyeyvn ngnleqwlrg dmsdkgyltw earikillgt akalaylhea iepkvvhrdi
      301 kssniliddn fdakisdfgl akllgdgksy ittrvmgtfg yvapeyansg llneksdvys
      361 fgvvlleait grypidygrp qpevnmvewl kmmvqlrrse evvdpnietr pstsalkral
      421 ltalrcvdpd adkrpkmsqv armleaeeyp lpredrrrrr nqsvnsdadt qrknsdadrs
      481 ddpdlrlesr mhhhp
//
LOCUS       XP_016693869             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_016693869
VERSION     XP_016693869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..495
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=55431
     Region          179..445
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,255,299,301,
                     303..304,306,317,320,337..340)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,299,301,
                     303..304,306,317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(183,253,255,299,301,303,320,337..340)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(316..323,333..340)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..495
                     /gene="LOC107910527"
                     /coded_by="XM_016838380.2:163..1650"
                     /db_xref="GeneID:107910527"
ORIGIN      
        1 masdlnktls keyiglqlwv liviclgvvf lvilsislwl sfrkksrran vmlpltqvpy
       61 vseeikeirv dqasanngnt lnekfsdkgs ekglfnvdng edsgqsgsfn hvdkdvkgsq
      121 pgeegptgtv styrpssnpl tapsplsglp efsrlgwghw ftlrdlhlat nrfskdniig
      181 dggygvvyrg nlingtpvav kkllnnpgqa dkdfrvevea ighvrhknlv rllgyciegt
      241 qrllvyeyvn ngnleqwlrg dmsdkgyltw earikillgt akalaylhea iepkvvhrdi
      301 kssniliddn fdakisdfgl akllgdgksy ittrvmgtfg yvapeyansg llneksdvys
      361 fgvvlleait grypidygrp qpevnmvewl kmmvqlrrse evvdpnietr pstsalkral
      421 ltalrcvdpd adkrpkmsqv armleaeeyp lpredrrrrr nqsvnsdadt qrknsdadrs
      481 ddpdlrlesr mhhhp
//
LOCUS       XP_040944179             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_040944179
VERSION     XP_040944179.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088245.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..495
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=55431
     Region          179..445
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,255,299,301,
                     303..304,306,317,320,337..340)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,299,301,
                     303..304,306,317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(183,253,255,299,301,303,320,337..340)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(316..323,333..340)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..495
                     /gene="LOC107910527"
                     /coded_by="XM_041088245.1:157..1644"
                     /db_xref="GeneID:107910527"
ORIGIN      
        1 masdlnktls keyiglqlwv liviclgvvf lvilsislwl sfrkksrran vmlpltqvpy
       61 vseeikeirv dqasanngnt lnekfsdkgs ekglfnvdng edsgqsgsfn hvdkdvkgsq
      121 pgeegptgtv styrpssnpl tapsplsglp efsrlgwghw ftlrdlhlat nrfskdniig
      181 dggygvvyrg nlingtpvav kkllnnpgqa dkdfrvevea ighvrhknlv rllgyciegt
      241 qrllvyeyvn ngnleqwlrg dmsdkgyltw earikillgt akalaylhea iepkvvhrdi
      301 kssniliddn fdakisdfgl akllgdgksy ittrvmgtfg yvapeyansg llneksdvys
      361 fgvvlleait grypidygrp qpevnmvewl kmmvqlrrse evvdpnietr pstsalkral
      421 ltalrcvdpd adkrpkmsqv armleaeeyp lpredrrrrr nqsvnsdadt qrknsdadrs
      481 ddpdlrlesr mhhhp
//
LOCUS       XP_040944180             495 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_040944180
VERSION     XP_040944180.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088246.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..495
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=55431
     Region          179..445
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,255,299,301,
                     303..304,306,317,320,337..340)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(179..183,187,199,201,230,246..249,253,299,301,
                     303..304,306,317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(183,253,255,299,301,303,320,337..340)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(316..323,333..340)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..495
                     /gene="LOC107910527"
                     /coded_by="XM_041088246.1:86..1573"
                     /db_xref="GeneID:107910527"
ORIGIN      
        1 masdlnktls keyiglqlwv liviclgvvf lvilsislwl sfrkksrran vmlpltqvpy
       61 vseeikeirv dqasanngnt lnekfsdkgs ekglfnvdng edsgqsgsfn hvdkdvkgsq
      121 pgeegptgtv styrpssnpl tapsplsglp efsrlgwghw ftlrdlhlat nrfskdniig
      181 dggygvvyrg nlingtpvav kkllnnpgqa dkdfrvevea ighvrhknlv rllgyciegt
      241 qrllvyeyvn ngnleqwlrg dmsdkgyltw earikillgt akalaylhea iepkvvhrdi
      301 kssniliddn fdakisdfgl akllgdgksy ittrvmgtfg yvapeyansg llneksdvys
      361 fgvvlleait grypidygrp qpevnmvewl kmmvqlrrse evvdpnietr pstsalkral
      421 ltalrcvdpd adkrpkmsqv armleaeeyp lpredrrrrr nqsvnsdadt qrknsdadrs
      481 ddpdlrlesr mhhhp
//
LOCUS       XP_016693873             230 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerase III subunit RPC6 [Gossypium hirsutum].
ACCESSION   XP_016693873
VERSION     XP_016693873.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693873.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..230
                     /product="DNA-directed RNA polymerase III subunit RPC6"
                     /calculated_mol_wt=25646
     Region          <14..229
                     /region_name="RNA_pol_Rpc34"
                     /note="RNA polymerase Rpc34 subunit; cl02127"
                     /db_xref="CDD:413207"
     CDS             1..230
                     /gene="LOC107910529"
                     /coded_by="XM_016838384.2:175..867"
                     /db_xref="GeneID:107910529"
ORIGIN      
        1 mnakrkrpdt vsdsvteqer ivhevirskq dmgisqqdmk reinlhsnli akcikslvsk
       61 nlikevknih srrqkhymsa evepsneitg gawyvegsld keyinvlkeq cwrkiyglkv
      121 atlegiadai krsnvsqiel skqqveeivk alvldnevme vrstgtgefa sipvgkacyk
      181 cagkrgygge pklgalasvp cgvcpqisrc tpdgiispit ceyykkwlef
//
LOCUS       XP_016693872             405 aa            linear   PLN 06-AUG-2024
DEFINITION  pto-interacting protein 1 [Gossypium hirsutum].
ACCESSION   XP_016693872
VERSION     XP_016693872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..405
                     /product="pto-interacting protein 1"
                     /calculated_mol_wt=44474
     Region          117..389
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(117..120,123,125,137,139,167,183..186,241,245..246,
                     248,258..259)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..405
                     /gene="LOC107910528"
                     /coded_by="XM_016838383.2:115..1332"
                     /db_xref="GeneID:107910528"
ORIGIN      
        1 msalpgkriq silnyvqvan sdqtlqthsl yvfadfqgkr nmscfsccee ddihkasgng
       61 sfmantpasn tggygyqare avtrdprpvt iqpiaipait vdelkemtdn fgmksligeg
      121 sygrvyygil ksgkaaaikk ldsskqpeqe flaqvsmvsr lkdenvvqll gycvdgslrf
      181 layeyasngs lhdrlhgkkg vkgaqpgpvl swtqrvkiay eaakgleylh ekahphiihr
      241 dikssnlllf dddvakiadf dlsnqapdat arlhstrvlg tfgyhapeya mtgtlssksd
      301 vysfgvilrc lhlvlllfni sysphlhnni watpklsedk vkqcvdgrln geyppkalak
      361 laavaalcvq yeadfrpnms ivvkalqpll nptrpattsr ayger
//
LOCUS       XP_016693868             267 aa            linear   PLN 06-AUG-2024
DEFINITION  novel plant SNARE 13 [Gossypium hirsutum].
ACCESSION   XP_016693868
VERSION     XP_016693868.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838379.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693868.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..267
                     /product="novel plant SNARE 13"
                     /calculated_mol_wt=30145
     Region          143..207
                     /region_name="SNARE_SNAP25N_23N_29N_SEC9N"
                     /note="N-terminal SNARE motif of SNAP25, SNAP23, SNAP29,
                     and SEC9; cd15861"
                     /db_xref="CDD:277214"
     Site            order(145,148..153,155..160,162..163,166..167,169..174,
                     176..177,179..181,183..188,190..191,193..195,197..198,
                     200..202,204..205,207)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277214"
     Site            180
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277214"
     CDS             1..267
                     /gene="LOC107910526"
                     /coded_by="XM_016838379.2:371..1174"
                     /db_xref="GeneID:107910526"
ORIGIN      
        1 mattelqmsp qleqihgeir dlfralsngf qrldkmkdsn rqskqleelt gkmreckrli
       61 kefdreikde esknppevnk qlndekqsmi kelnsyvamr ktymntlgnk kielfdmgag
      121 vseptadenv kmassmsnqe lvdhgmktmd etdqaiersk kvveqtievg tqtagtlkgq
      181 tdqmgrivne ldtiqfsikk asqlvkeigr qvatdkciml flflivcgvi aiivvkivnp
      241 nnkdirdipg lappapsrrl lylrspq
//
LOCUS       XP_016693867             202 aa            linear   PLN 06-AUG-2024
DEFINITION  rRNA-processing protein fcf2 [Gossypium hirsutum].
ACCESSION   XP_016693867
VERSION     XP_016693867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838378.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="rRNA-processing protein fcf2"
                     /calculated_mol_wt=23055
     Region          77..170
                     /region_name="Fcf2"
                     /note="Fcf2 pre-rRNA processing; pfam08698"
                     /db_xref="CDD:462566"
     CDS             1..202
                     /gene="LOC107910525"
                     /coded_by="XM_016838378.2:189..797"
                     /db_xref="GeneID:107910525"
ORIGIN      
        1 mpeskavigl rwepklpalp fqskttsmsg sgsvsrsrne pqstslwkpn qqlidglflp
       61 pndaskvnkl lrkqvkdtag tawfdmpapt ltpelkkdlq llklrgaidp krhykkesks
      121 nalpkyfqvg tvvesvtdyy sgrmtkkekk ptladellsd pavrqyrkrk vreieernrp
      181 agnekwkikg rqtfkrakqr rh
//
LOCUS       XP_016693864             263 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693864
VERSION     XP_016693864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838375.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..263
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28086
     CDS             1..263
                     /gene="LOC107910521"
                     /coded_by="XM_016838375.2:390..1181"
                     /db_xref="GeneID:107910521"
ORIGIN      
        1 mkrdqlsecg gcgaperfll hnlrhrasyr rlctncvlkn hqglfcpicl evfnesppph
       61 qrliclkcps ishlscssss lspssftcpp csnpnfsffn ltptkkpkst pdhppgstld
      121 gdddnnkttn trvidkeaak allaaakiaa asmtkaaava kveaerrvke atlakkrake
      181 alerlallar kdndrhkssl vgipkskpda aiaaaadaka nslslpspip dkgnngsysv
      241 saanvsisip klqrqqsthg mpn
//
LOCUS       XP_040944182             322 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L3-2, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040944182
VERSION     XP_040944182.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088248.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="50S ribosomal protein L3-2, mitochondrial"
                     /calculated_mol_wt=35139
     Region          76..277
                     /region_name="L3_bact"
                     /note="50S ribosomal protein uL3, bacterial form;
                     TIGR03625"
                     /db_xref="CDD:274684"
     CDS             1..322
                     /gene="LOC107910520"
                     /coded_by="XM_041088248.1:283..1251"
                     /db_xref="GeneID:107910520"
ORIGIN      
        1 maalstrglv srlhqhflsl srpfaaapts lpfhaltrrl fssdalmdgs qilhqpptri
       61 iqatpaimtp nskrtgiiav kcgmtalwdk wgarlpitil wvddnivsqv ktvekegifs
      121 lqigcghkkp khltkpevgh fraqgvplkr klkefpvted allpvgtslg vrhfvpgqyv
      181 dvtgtsrgkg fqgamkrwgf kgmpashgas lshrspgstg qrdapgkvfk gkkmpghmga
      241 ktrtvknvwv ykidparnlm wvrgqvpgak gnfvfikdsv ykkpdvsmlp fptyfaaede
      301 detnigplva dlgevdpfmv ad
//
LOCUS       XP_016693862             741 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693862
VERSION     XP_016693862.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838373.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693862.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..741
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83418
     Region          9..100
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(21,23,29..31,48,96)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(21,23,30..32,48,52,96)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(23,52)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Region          173..237
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          <340..>647
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     Region          365..454
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          625..652
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..741
                     /gene="LOC107910518"
                     /coded_by="XM_016838373.2:163..2388"
                     /db_xref="GeneID:107910518"
ORIGIN      
        1 mangklivvc qsggkfttng dgtlsysggd ahatsltlnt kfddfkseis dmwkydlqsl
       61 tikyllpnnk rtlitistdr dilrflefhe dsasadvyvm tpsppspsda tslpcsrssh
      121 tmpngpvspi daptdylpde pifpvdapmd flpdsedagk qktpqisswk scitgvgqtf
      181 ntrhelheal dkfslahgfh ytlknsdgrr fcarckaegc pwffiapkls ttklfrikkm
      241 ndthtcgvgs iratasrklv asivkeklrd tptykpqeii ddirrdlgie lnyaqayggi
      301 aaaleelqgs hrtaynqlpl lcekiletnp gsaailntke dlnfhrifva fhaslygfqn
      361 gcrpllfldc tslkskyrge lftataldgn dgnflvafai vdvlsddnwh wfleqlktvl
      421 smspeitfva dmkkemsesl slvfpncfhg yclhqltesl krkfkgsltl evvrvlisef
      481 hsaayaptae gfkkcietik nispeayewv lqtepehwan affkgarynh lkssvtesfc
      541 dwvsdlpamp itqvietirr klmefiytrk mdsdqwssnl tpsaeenlqr slvnsrslev
      601 vlshsscfkv rdtldminvv nlenwdcscr ewqinglpcl havaaiehvg knvydycyry
      661 ftteafkvty sesinpippl drcmkressl vlvhppcvtr pvgrpkerky alksnqavkr
      721 tlqcskckkl ghnkrkckqs a
//
LOCUS       XP_016693863             741 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693863
VERSION     XP_016693863.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838374.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693863.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..741
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83418
     Region          9..100
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(21,23,29..31,48,96)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(21,23,30..32,48,52,96)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(23,52)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Site            order(68,81)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99731"
     Region          173..237
                     /region_name="DBD_Tnp_Mut"
                     /note="MuDR family transposase; pfam03108"
                     /db_xref="CDD:427142"
     Region          <340..>647
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     Region          365..454
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          625..652
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..741
                     /gene="LOC107910518"
                     /coded_by="XM_016838374.2:166..2391"
                     /db_xref="GeneID:107910518"
ORIGIN      
        1 mangklivvc qsggkfttng dgtlsysggd ahatsltlnt kfddfkseis dmwkydlqsl
       61 tikyllpnnk rtlitistdr dilrflefhe dsasadvyvm tpsppspsda tslpcsrssh
      121 tmpngpvspi daptdylpde pifpvdapmd flpdsedagk qktpqisswk scitgvgqtf
      181 ntrhelheal dkfslahgfh ytlknsdgrr fcarckaegc pwffiapkls ttklfrikkm
      241 ndthtcgvgs iratasrklv asivkeklrd tptykpqeii ddirrdlgie lnyaqayggi
      301 aaaleelqgs hrtaynqlpl lcekiletnp gsaailntke dlnfhrifva fhaslygfqn
      361 gcrpllfldc tslkskyrge lftataldgn dgnflvafai vdvlsddnwh wfleqlktvl
      421 smspeitfva dmkkemsesl slvfpncfhg yclhqltesl krkfkgsltl evvrvlisef
      481 hsaayaptae gfkkcietik nispeayewv lqtepehwan affkgarynh lkssvtesfc
      541 dwvsdlpamp itqvietirr klmefiytrk mdsdqwssnl tpsaeenlqr slvnsrslev
      601 vlshsscfkv rdtldminvv nlenwdcscr ewqinglpcl havaaiehvg knvydycyry
      661 ftteafkvty sesinpippl drcmkressl vlvhppcvtr pvgrpkerky alksnqavkr
      721 tlqcskckkl ghnkrkckqs a
//
LOCUS       XP_016693858             335 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA pseudouridine synthase A 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693858
VERSION     XP_016693858.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693858.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="tRNA pseudouridine synthase A 1 isoform X1"
                     /calculated_mol_wt=37333
     Region          58..305
                     /region_name="PseudoU_synth_EcTruA"
                     /note="Eukaryotic and bacterial pseudouridine synthases
                     similar to E. coli TruA; cd02570"
                     /db_xref="CDD:211337"
     Site            order(61,136,139..146)
                     /site_type="other"
                     /note="dimerization interface 3.5A [polypeptide binding]"
                     /db_xref="CDD:211337"
     Site            order(104..107,255)
                     /site_type="active"
                     /db_xref="CDD:211337"
     CDS             1..335
                     /gene="LOC107910516"
                     /coded_by="XM_016838369.2:88..1095"
                     /db_xref="GeneID:107910516"
ORIGIN      
        1 mgsgggalgl ssplfanghl ssssnstslp lpvedgnhla mvkpsssivn lphykwrlli
       61 aydgtryagw qfqvspptiq civekaliqi tklereclhf vgasrtdtgv hawgqvahfi
      121 tpfnydslet ihaalngllp sgirvreisa atpefharfs akskvyhyki yndtimdpfq
      181 rhyvyhsvyk lnsaamreaa kmfirkhdfs afvnasrndr vpdpvktifr fdviemgpli
      241 qlevegsgfl yrqvrnmval liqigkeaip teivpkilat ldrrelakya lsapphglcl
      301 vsvkynqehl llpsdcptts fgrhhtitkc klpfy
//
LOCUS       XP_016693859             287 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA pseudouridine synthase A 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693859
VERSION     XP_016693859.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693859.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..287
                     /product="tRNA pseudouridine synthase A 1 isoform X2"
                     /calculated_mol_wt=32239
     Region          21..257
                     /region_name="PseudoU_synth_EcTruA"
                     /note="Eukaryotic and bacterial pseudouridine synthases
                     similar to E. coli TruA; cd02570"
                     /db_xref="CDD:211337"
     Site            order(56..59,207)
                     /site_type="active"
                     /db_xref="CDD:211337"
     Site            order(88,91..98)
                     /site_type="other"
                     /note="dimerization interface 3.5A [polypeptide binding]"
                     /db_xref="CDD:211337"
     CDS             1..287
                     /gene="LOC107910516"
                     /coded_by="XM_016838370.2:137..1000"
                     /db_xref="GeneID:107910516"
ORIGIN      
        1 maalalalal alisslsylv gwqfqvsppt iqcivekali qitklerecl hfvgasrtdt
       61 gvhawgqvah fitpfnydsl etihaalngl lpsgirvrei saatpefhar fsakskvyhy
      121 kiyndtimdp fqrhyvyhsv yklnsaamre aakmfirkhd fsafvnasrn drvpdpvkti
      181 frfdviemgp liqlevegsg flyrqvrnmv alliqigkea ipteivpkil atldrrelak
      241 yalsapphgl clvsvkynqe hlllpsdcpt tsfgrhhtit kcklpfy
//
LOCUS       XP_016693860             313 aa            linear   PLN 06-AUG-2024
DEFINITION  G-protein coupled receptor 1 [Gossypium hirsutum].
ACCESSION   XP_016693860
VERSION     XP_016693860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838371.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..313
                     /product="G-protein coupled receptor 1"
                     /calculated_mol_wt=35668
     Region          20..266
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          42..63
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320094"
     Region          75..97
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320094"
     Region          116..132
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320094"
     Region          199..231
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320094"
     Region          242..266
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320094"
     CDS             1..313
                     /gene="LOC107910517"
                     /coded_by="XM_016838371.2:186..1127"
                     /db_xref="GeneID:107910517"
ORIGIN      
        1 matvlslhdr giltavnsga sslsfvgsgf ivlcyslfke lrkfsfklvf ylslsdmlcs
       61 ffnmvgdpsk gffcyaqgyt thffcvasfl wtttiaftlh rtvvrhktdv edleaifhly
      121 vwgtslvmtv irsigndhth lgawcwaqtg rtgkavhfit fyvplwgail yngftyfqvi
      181 rmlnnatrma vgmsdrayqf dsrtdtkaln rwgyyplili gswafgtinr ihdfiepghk
      241 ifwltfldvg tagllglfns iayglnasvr raiserlelf wpeslkrwfp nssrhrnqqq
      301 qselvslkvq dqq
//
LOCUS       XP_016691033              97 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-UB [Gossypium hirsutum].
ACCESSION   XP_016691033
VERSION     XP_016691033.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835544.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691033.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..97
                     /product="kinesin-like protein KIN-UB"
                     /calculated_mol_wt=10712
     Region          <1..>53
                     /region_name="Kinesin"
                     /note="Kinesin motor domain; pfam00225"
                     /db_xref="CDD:459720"
     CDS             1..97
                     /gene="LOC107908368"
                     /coded_by="XM_016835544.2:16..309"
                     /db_xref="GeneID:107908368"
ORIGIN      
        1 maygqtgtgk tyilgrlgee dttnrgimvr amedilaevs peidsvlvsy lqvvvrrsrc
       61 nhylselhkt lldscisqft atrdlncgla ilrymva
//
LOCUS       XP_016693856             554 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHUP1, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693856
VERSION     XP_016693856.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..554
                     /product="protein CHUP1, chloroplastic isoform X1"
                     /calculated_mol_wt=61064
     Region          76..>161
                     /region_name="PRK09039"
                     /note="peptidoglycan -binding protein"
                     /db_xref="CDD:181619"
     CDS             1..554
                     /gene="LOC107910512"
                     /coded_by="XM_016838367.2:579..2243"
                     /db_xref="GeneID:107910512"
ORIGIN      
        1 mkpadckvap ipmsqqrstt pssfrvnskp kdqsaarpks vppdttknsr ksvmmmnkpk
       61 sgdqlpaggc yhkgrvveqf gkprrssans sstteknsav delreklscs eglvkdlqtq
      121 vmglraeldg arslnmeles lnrklkedla aaedkiaals spqpdpdpdp hpdqvhlqkr
      181 essgeyqspk fkdiqklian klehpkvtrg eartvkvppr ptaslapkda nhqtiapity
      241 sqpppppppl pslpplpppp ppprfpakaa ttpkahslvm gpvqsyqekk kdppvaaaaw
      301 nqkkptvisv hssivgeiqn rsahllaika dvetkgefin slihrvlaaa ytdieevlkf
      361 vdwldnelss laderavlkh fkwperkada mreaaieyrd lkllemeiss feddtsnpcg
      421 valkrmagll dksersiqrl iklrnsvirs yqeckipvdw mldsgmvyki kqasmklvtm
      481 yikrvgtelq lvrsldkesa qealllqgmh fanrahqfag dldsetlcaf eeikecipgh
      541 lvgskellag issa
//
LOCUS       XP_016693857             553 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHUP1, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693857
VERSION     XP_016693857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838368.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..553
                     /product="protein CHUP1, chloroplastic isoform X2"
                     /calculated_mol_wt=60936
     Region          76..>161
                     /region_name="PRK09039"
                     /note="peptidoglycan -binding protein"
                     /db_xref="CDD:181619"
     CDS             1..553
                     /gene="LOC107910512"
                     /coded_by="XM_016838368.2:582..2243"
                     /db_xref="GeneID:107910512"
ORIGIN      
        1 mkpadckvap ipmsqqrstt pssfrvnskp kdqsaarpks vppdttknsr ksvmmmnkpk
       61 sgdqlpaggc yhkgrvveqf gkprrssans sstteknsav delreklscs eglvkdlqtq
      121 vmglraeldg arslnmeles lnrklkedla aaedkiaals spqpdpdpdp hpdqvhlqre
      181 ssgeyqspkf kdiqkliank lehpkvtrge artvkvpprp taslapkdan hqtiapitys
      241 qppppppplp slpplppppp pprfpakaat tpkahslvmg pvqsyqekkk dppvaaaawn
      301 qkkptvisvh ssivgeiqnr sahllaikad vetkgefins lihrvlaaay tdieevlkfv
      361 dwldnelssl aderavlkhf kwperkadam reaaieyrdl kllemeissf eddtsnpcgv
      421 alkrmaglld ksersiqrli klrnsvirsy qeckipvdwm ldsgmvykik qasmklvtmy
      481 ikrvgtelql vrsldkesaq ealllqgmhf anrahqfagd ldsetlcafe eikecipghl
      541 vgskellagi ssa
//
LOCUS       XP_016694009             745 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 4
            [Gossypium hirsutum].
ACCESSION   XP_016694009
VERSION     XP_016694009.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838520.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694009.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..745
                     /product="LOW QUALITY PROTEIN: conserved oligomeric Golgi
                     complex subunit 4"
                     /calculated_mol_wt=83312
     Region          182..483
                     /region_name="COG4"
                     /note="COG4 transport protein; pfam08318"
                     /db_xref="CDD:462425"
     Region          <632..732
                     /region_name="RINT1_TIP1"
                     /note="RINT-1 / TIP-1 family; pfam04437"
                     /db_xref="CDD:461309"
     CDS             1..745
                     /gene="LOC107910613"
                     /coded_by="XM_016838520.2:165..2402"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:107910613"
ORIGIN      
        1 mlstpyesea teqhddtsas tmkfgtpeav dyvrsltdvg amtrllheci ayqraldvdl
       61 dtllsqrtdl dkslnnlqrs advldivkae sdhmlsnvts tchladqvsr kvreldlaqs
      121 rvnstllrid aivergncig gvksaldaed yesatnyvrt fleidnkfkd sgsdhreqll
      181 askkqlegiv kkklmaavdq rdhatilrfi klysplglee eglqvyvgyl kkvigmrsrl
      241 eyenlvelme qsngqnqnnq vnfvgcltnl fkdivlavee ndeilrtlcg edgvvyaife
      301 lqeecdsrgs lilxkymefr klaklssein sxnknlltvg apegpnprei elyleeilsl
      361 mqlgedytqy mvskikgmtt vdpdlvprat kafrtgsfsk vaqditgfyv ilegffmven
      421 vrkaigidel vpdslttsmv ddvfyvlqsc lrraistsni ssvvavlsga ssllnneyye
      481 alqlkvrepn lgpklflggv gvqktgteia talnnidlss eyvlklkhei eeqcaevfpa
      541 pterekvksc lseladlsnt fkqaqnagme qlaatvtpqi rpvldsvati syelseseya
      601 enevndpwvq rllhafeinv awlqplmttn nydsfvhlvi dfivkrlevi mmqkrfsqlg
      661 glqldrdtra lvshfsgmtq rtvrdkfarl tqmatilnle kvseildfwg ensgpmtwrl
      721 tpaevrrvls lrvdfkpeai aalkl
//
LOCUS       XP_016690466             182 aa            linear   PLN 06-AUG-2024
DEFINITION  CASP-like protein 4D1 [Gossypium hirsutum].
ACCESSION   XP_016690466
VERSION     XP_016690466.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834977.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..182
                     /product="CASP-like protein 4D1"
                     /calculated_mol_wt=19563
     Region          4..>111
                     /region_name="CASP_dom"
                     /note="Casparian strip membrane protein domain; pfam04535"
                     /db_xref="CDD:367980"
     CDS             1..182
                     /gene="LOC107907636"
                     /coded_by="XM_016834977.1:32..580"
                     /db_xref="GeneID:107907636"
ORIGIN      
        1 maskkgmaia slvlrlftil faagcivvli ldkapnggds nvtfrdvigy kyvfataava
       61 aaycllllpf tmyracctgk klvrgpflpa lyfygdkvva fvlasgvgag fldtadlkva
      121 ygdffelfge dfkdtplegf fnkgyvatal lagaflcmai lsqfsfprrp ptdatnkgff
      181 fr
//
LOCUS       XP_040944184             158 aa            linear   PLN 06-AUG-2024
DEFINITION  accelerated cell death 11 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944184
VERSION     XP_040944184.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088250.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..158
                     /product="accelerated cell death 11 isoform X1"
                     /calculated_mol_wt=17556
     CDS             1..158
                     /gene="LOC107908436"
                     /coded_by="XM_041088250.1:504..980"
                     /db_xref="GeneID:107908436"
ORIGIN      
        1 meyvakvgnl veaskrfatl enivdadvgn gtvkkqrsps pdlhrvrqgl dlvralfeqf
       61 lssnmgkkgs wfsaikkiff phskeklnnv qstsdgtdst lsnplceesa qnsskysnrq
      121 kfafiftldi ncivndadns swlfncqhts ttclwlia
//
LOCUS       XP_040944185             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944185
VERSION     XP_040944185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088251.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=16081
     Region          <100..136
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..144
                     /gene="LOC107908436"
                     /coded_by="XM_041088251.1:1102..1536"
                     /db_xref="GeneID:107908436"
ORIGIN      
        1 msnlhlmeli plfqtpcars llkilqntlt drslllfslw tltvllmmlt ilagfsivsi
       61 hpppafgssp nlealalean kskdqdgdss lldsshlsrf dcgmfmlkyi nfysrglslc
      121 feqehmpyal fsfkdrqgns ktes
//
LOCUS       XP_040944186             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944186
VERSION     XP_040944186.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088252.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=16081
     Region          <100..136
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..144
                     /gene="LOC107908436"
                     /coded_by="XM_041088252.1:1032..1466"
                     /db_xref="GeneID:107908436"
ORIGIN      
        1 msnlhlmeli plfqtpcars llkilqntlt drslllfslw tltvllmmlt ilagfsivsi
       61 hpppafgssp nlealalean kskdqdgdss lldsshlsrf dcgmfmlkyi nfysrglslc
      121 feqehmpyal fsfkdrqgns ktes
//
LOCUS       XP_040944187             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944187
VERSION     XP_040944187.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088253.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=16081
     Region          <100..136
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..144
                     /gene="LOC107908436"
                     /coded_by="XM_041088253.1:800..1234"
                     /db_xref="GeneID:107908436"
ORIGIN      
        1 msnlhlmeli plfqtpcars llkilqntlt drslllfslw tltvllmmlt ilagfsivsi
       61 hpppafgssp nlealalean kskdqdgdss lldsshlsrf dcgmfmlkyi nfysrglslc
      121 feqehmpyal fsfkdrqgns ktes
//
LOCUS       XP_016691086             431 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein SHOOT GRAVITROPISM 5 [Gossypium hirsutum].
ACCESSION   XP_016691086
VERSION     XP_016691086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835597.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..431
                     /product="zinc finger protein SHOOT GRAVITROPISM 5"
                     /calculated_mol_wt=48121
     Region          59..79
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          136..155
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          163..179
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <331..>382
                     /region_name="V-ATPase_G_2"
                     /note="Vacuolar (H+)-ATPase G subunit; pfam16999"
                     /db_xref="CDD:339878"
     CDS             1..431
                     /gene="LOC107908435"
                     /coded_by="XM_016835597.2:483..1778"
                     /db_xref="GeneID:107908435"
ORIGIN      
        1 mlannscssl pssepfscle ngttninkrk rrpagtpdpd aevvslspkt llesdryvce
       61 icnqgfqrdq nlqmhrrrhk vpwkllkret pvvrkrvfvc peptclhhdp chalgdlvgi
      121 kkhfrrkhsn hkqwvcdkcs kayavqsdyk ahlktcgtrg hscdcgrvfs rvesfiehqd
      181 achmgrvirp esqgvqlacl srtasspsps ndtnfstapc pwpslalpkt kdamflsptk
      241 yhnspknals hnlelqlltt snpsevsvsp kkhdndpthl qlsigssdig dkveystvtc
      301 thkdasnksg hhekqapqpl rvameektya eearqeakrq ieiaeqefak akrirqqaqa
      361 elekaqalkd haikqinsti lqitchacqh qfqartppee nslvasyiss avtegevend
      421 iqtsltkatn t
//
LOCUS       XP_016735006             243 aa            linear   PLN 06-AUG-2024
DEFINITION  CRAL-TRIO domain-containing protein YKL091C [Gossypium hirsutum].
ACCESSION   XP_016735006
VERSION     XP_016735006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016879517.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="CRAL-TRIO domain-containing protein YKL091C"
                     /calculated_mol_wt=27903
     Region          9..51
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          73..227
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..243
                     /gene="LOC107945490"
                     /coded_by="XM_016879517.2:244..975"
                     /db_xref="GeneID:107945490"
ORIGIN      
        1 mekshelelt qmrksveklg fstekygdpt lmrfliarsm dtdkaskmfv qwlkwrsslv
       61 pngfvvesev pdqlearkif lqglsktgyp vmivqackhy ppkdhlqfkk fvvylldkti
      121 asavkgreig nekligvldf qnityrnvda rglitgfqfl qayfperlak cyivhmprff
      181 vsvwrmvsrf iekstlekiv ivtnddekki fieeigeeal pveyggkail raiqdvqvpt
      241 leg
//
LOCUS       XP_016694064             456 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome berefringence-like 7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694064
VERSION     XP_016694064.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838575.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694064.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..456
                     /product="protein trichome berefringence-like 7 isoform
                     X1"
                     /calculated_mol_wt=52234
     Region          104..155
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          156..429
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..456
                     /gene="LOC107910644"
                     /coded_by="XM_016838575.2:717..2087"
                     /db_xref="GeneID:107910644"
ORIGIN      
        1 mvnnfsrsts fnrralnaes prvlnvsspk alnvlsakpl cftssrvyhr lgwvsrlfpv
       61 liligalisf iillhggyiy vlpslsqafy ghgvlkfnds snvcdifdgs wvidddypfy
      121 nasdcpfaeq gfnclgngrk drdylkwrwk pkncdiprfn vhnvlemlrd krivfvgdsm
      181 srtqweslic llmtgvedkk svyevngnki tkrirflgvr ftsfnftief frsvflvqhg
      241 wmprhapkrv rstlkldkld dvsnewinad vlifntgqww vpgklfetgc yfqvgnsvkl
      301 gmsipaafkm algtwaswve ntidtnrtlv ffrtfepshw seksrrfcnv tqnplleteg
      361 rersifseti feviknmtvp itvlqvtsms afrrdahvgg wsdnpmvpdc shwclpglpd
      421 iwneiflsyl ladyglpavn gkqcefwvlr saliai
//
LOCUS       XP_016694065             449 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome berefringence-like 7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694065
VERSION     XP_016694065.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838576.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694065.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="protein trichome berefringence-like 7 isoform
                     X2"
                     /calculated_mol_wt=51566
     Region          104..155
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          156..429
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..449
                     /gene="LOC107910644"
                     /coded_by="XM_016838576.2:717..2066"
                     /db_xref="GeneID:107910644"
ORIGIN      
        1 mvnnfsrsts fnrralnaes prvlnvsspk alnvlsakpl cftssrvyhr lgwvsrlfpv
       61 liligalisf iillhggyiy vlpslsqafy ghgvlkfnds snvcdifdgs wvidddypfy
      121 nasdcpfaeq gfnclgngrk drdylkwrwk pkncdiprfn vhnvlemlrd krivfvgdsm
      181 srtqweslic llmtgvedkk svyevngnki tkrirflgvr ftsfnftief frsvflvqhg
      241 wmprhapkrv rstlkldkld dvsnewinad vlifntgqww vpgklfetgc yfqvgnsvkl
      301 gmsipaafkm algtwaswve ntidtnrtlv ffrtfepshw seksrrfcnv tqnplleteg
      361 rersifseti feviknmtvp itvlqvtsms afrrdahvgg wsdnpmvpdc shwclpglpd
      421 iwneiflsyl ladyglpavn gkqywmthd
//
LOCUS       XP_016694066             369 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome berefringence-like 7 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016694066
VERSION     XP_016694066.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838577.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694066.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..369
                     /product="protein trichome berefringence-like 7 isoform
                     X3"
                     /calculated_mol_wt=42603
     Region          104..155
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          156..>351
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..369
                     /gene="LOC107910644"
                     /coded_by="XM_016838577.2:717..1826"
                     /db_xref="GeneID:107910644"
ORIGIN      
        1 mvnnfsrsts fnrralnaes prvlnvsspk alnvlsakpl cftssrvyhr lgwvsrlfpv
       61 liligalisf iillhggyiy vlpslsqafy ghgvlkfnds snvcdifdgs wvidddypfy
      121 nasdcpfaeq gfnclgngrk drdylkwrwk pkncdiprfn vhnvlemlrd krivfvgdsm
      181 srtqweslic llmtgvedkk svyevngnki tkrirflgvr ftsfnftief frsvflvqhg
      241 wmprhapkrv rstlkldkld dvsnewinad vlifntgqww vpgklfetgc yfqvgnsvkl
      301 gmsipaafkm algtwaswve ntidtnrtlv ffrtfepshw remlvpmtew nfqlhheais
      361 kstlkrksf
//
LOCUS       XP_040944188              88 aa            linear   PLN 06-AUG-2024
DEFINITION  proline--tRNA ligase, cytoplasmic [Gossypium hirsutum].
ACCESSION   XP_040944188
VERSION     XP_040944188.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088254.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..88
                     /product="proline--tRNA ligase, cytoplasmic"
                     /calculated_mol_wt=9992
     Region          <1..82
                     /region_name="HGTP_anticodon"
                     /note="HGTP anticodon binding domain, as found at the
                     C-terminus of histidyl, glycyl, threonyl and prolyl tRNA
                     synthetases, which are classified as a group of class II
                     aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon
                     binding domain is responsible for...; cl00266"
                     /db_xref="CDD:469699"
     CDS             1..88
                     /gene="LOC107910645"
                     /coded_by="XM_041088254.1:622..888"
                     /db_xref="GeneID:107910645"
ORIGIN      
        1 mldkiqqnlf dvakqkrdac ievvktwdef vkalgqkkli lapwcdeeev ekdvkartrg
       61 emgaakslct pfeqpelpeg etpfkerl
//
LOCUS       XP_016694067              88 aa            linear   PLN 06-AUG-2024
DEFINITION  proline--tRNA ligase, cytoplasmic [Gossypium hirsutum].
ACCESSION   XP_016694067
VERSION     XP_016694067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..88
                     /product="proline--tRNA ligase, cytoplasmic"
                     /calculated_mol_wt=9992
     Region          <1..82
                     /region_name="HGTP_anticodon"
                     /note="HGTP anticodon binding domain, as found at the
                     C-terminus of histidyl, glycyl, threonyl and prolyl tRNA
                     synthetases, which are classified as a group of class II
                     aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon
                     binding domain is responsible for...; cl00266"
                     /db_xref="CDD:469699"
     CDS             1..88
                     /gene="LOC107910645"
                     /coded_by="XM_016838578.2:330..596"
                     /db_xref="GeneID:107910645"
ORIGIN      
        1 mldkiqqnlf dvakqkrdac ievvktwdef vkalgqkkli lapwcdeeev ekdvkartrg
       61 emgaakslct pfeqpelpeg etpfkerl
//
LOCUS       XP_016693137             589 aa            linear   PLN 06-AUG-2024
DEFINITION  protein indeterminate-domain 5, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693137
VERSION     XP_016693137.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837648.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..589
                     /product="protein indeterminate-domain 5, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=63307
     Region          75..95
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(80,82,84,86..87,90..91,94,128,130,134..135,138..139,
                     143,156,158,160,162..163,166..167,170)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          116..144
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          151..170
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          178..194
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..589
                     /gene="LOC107909938"
                     /coded_by="XM_016837648.2:378..2147"
                     /db_xref="GeneID:107909938"
ORIGIN      
        1 maaassstpf fgtreenqnq mmqvqsstat ptsstaptta pqkrkrnhpg tssdpdaevi
       61 alspktlmat nrficevcnk gfqreqnlql hrrghnlpwk lrqkttkevk rkvylcpept
      121 cvhhdpskal gdltgikkhy srkhgekkwk cekcskryav qsdwkahskt cgtreyrcdc
      181 gtlfsrrdsf ithrafcdal aqesarhptn lstmgshhlf ggnhhmslgl shvgsqippl
      241 qdqnqvqpss nllrlgstsg avkfdhlisp snpsslqnmp ssmffmaeaa nqgfhqdhqs
      301 hhghglypnk plhglmqlpd lqgstnnspt ssnffnlgff sntsatssis tseigggqgp
      361 alfpsnmgdq vgsgmsslyt tsmqhenisp hmsatallqk aaqigsttsn nttstllrgl
      421 gsslsggtks drpvfspnfg snfeggngse tlrshmedds nlqglmnsla angnssifdg
      481 gpshgqdnnf ggfngsgltl epqssnanfc nvneaklhqn laagiggtdk ltldflgvgg
      541 mvgnisggfs qreqhginis slepdmkssv qpntehfgha klakaprqa
//
LOCUS       XP_016693138             589 aa            linear   PLN 06-AUG-2024
DEFINITION  protein indeterminate-domain 5, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693138
VERSION     XP_016693138.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837649.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..589
                     /product="protein indeterminate-domain 5, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=63307
     Region          75..95
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(80,82,84,86..87,90..91,94,128,130,134..135,138..139,
                     143,156,158,160,162..163,166..167,170)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          116..144
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          151..170
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          178..194
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..589
                     /gene="LOC107909938"
                     /coded_by="XM_016837649.2:252..2021"
                     /db_xref="GeneID:107909938"
ORIGIN      
        1 maaassstpf fgtreenqnq mmqvqsstat ptsstaptta pqkrkrnhpg tssdpdaevi
       61 alspktlmat nrficevcnk gfqreqnlql hrrghnlpwk lrqkttkevk rkvylcpept
      121 cvhhdpskal gdltgikkhy srkhgekkwk cekcskryav qsdwkahskt cgtreyrcdc
      181 gtlfsrrdsf ithrafcdal aqesarhptn lstmgshhlf ggnhhmslgl shvgsqippl
      241 qdqnqvqpss nllrlgstsg avkfdhlisp snpsslqnmp ssmffmaeaa nqgfhqdhqs
      301 hhghglypnk plhglmqlpd lqgstnnspt ssnffnlgff sntsatssis tseigggqgp
      361 alfpsnmgdq vgsgmsslyt tsmqhenisp hmsatallqk aaqigsttsn nttstllrgl
      421 gsslsggtks drpvfspnfg snfeggngse tlrshmedds nlqglmnsla angnssifdg
      481 gpshgqdnnf ggfngsgltl epqssnanfc nvneaklhqn laagiggtdk ltldflgvgg
      541 mvgnisggfs qreqhginis slepdmkssv qpntehfgha klakaprqa
//
LOCUS       XP_016693139             588 aa            linear   PLN 06-AUG-2024
DEFINITION  protein indeterminate-domain 5, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693139
VERSION     XP_016693139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837650.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..588
                     /product="protein indeterminate-domain 5, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=63268
     Region          74..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(79,81,83,85..86,89..90,93,127,129,133..134,137..138,
                     142,155,157,159,161..162,165..166,169)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          115..143
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          150..169
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          177..193
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..588
                     /gene="LOC107909938"
                     /coded_by="XM_016837650.2:378..2144"
                     /db_xref="GeneID:107909938"
ORIGIN      
        1 maaassstpf fgtreenqnq mmqvqsstat ptsstaptta pqkrkrnhpg tsypdaevia
       61 lspktlmatn rficevcnkg fqreqnlqlh rrghnlpwkl rqkttkevkr kvylcpeptc
      121 vhhdpskalg dltgikkhys rkhgekkwkc ekcskryavq sdwkahsktc gtreyrcdcg
      181 tlfsrrdsfi thrafcdala qesarhptnl stmgshhlfg gnhhmslgls hvgsqipplq
      241 dqnqvqpssn llrlgstsga vkfdhlisps npsslqnmps smffmaeaan qgfhqdhqsh
      301 hghglypnkp lhglmqlpdl qgstnnspts snffnlgffs ntsatssist seigggqgpa
      361 lfpsnmgdqv gsgmsslytt smqhenisph msatallqka aqigsttsnn ttstllrglg
      421 sslsggtksd rpvfspnfgs nfeggngset lrshmeddsn lqglmnslaa ngnssifdgg
      481 pshgqdnnfg gfngsgltle pqssnanfcn vneaklhqnl aagiggtdkl tldflgvggm
      541 vgnisggfsq reqhginiss lepdmkssvq pntehfghak lakaprqa
//
LOCUS       XP_040944189             588 aa            linear   PLN 06-AUG-2024
DEFINITION  protein indeterminate-domain 5, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944189
VERSION     XP_040944189.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088255.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..588
                     /product="protein indeterminate-domain 5, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=63268
     Region          74..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(79,81,83,85..86,89..90,93,127,129,133..134,137..138,
                     142,155,157,159,161..162,165..166,169)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          115..143
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          150..169
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          177..193
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..588
                     /gene="LOC107909938"
                     /coded_by="XM_041088255.1:540..2306"
                     /db_xref="GeneID:107909938"
ORIGIN      
        1 maaassstpf fgtreenqnq mmqvqsstat ptsstaptta pqkrkrnhpg tsypdaevia
       61 lspktlmatn rficevcnkg fqreqnlqlh rrghnlpwkl rqkttkevkr kvylcpeptc
      121 vhhdpskalg dltgikkhys rkhgekkwkc ekcskryavq sdwkahsktc gtreyrcdcg
      181 tlfsrrdsfi thrafcdala qesarhptnl stmgshhlfg gnhhmslgls hvgsqipplq
      241 dqnqvqpssn llrlgstsga vkfdhlisps npsslqnmps smffmaeaan qgfhqdhqsh
      301 hghglypnkp lhglmqlpdl qgstnnspts snffnlgffs ntsatssist seigggqgpa
      361 lfpsnmgdqv gsgmsslytt smqhenisph msatallqka aqigsttsnn ttstllrglg
      421 sslsggtksd rpvfspnfgs nfeggngset lrshmeddsn lqglmnslaa ngnssifdgg
      481 pshgqdnnfg gfngsgltle pqssnanfcn vneaklhqnl aagiggtdkl tldflgvggm
      541 vgnisggfsq reqhginiss lepdmkssvq pntehfghak lakaprqa
//
LOCUS       XP_016693546             119 aa            linear   PLN 06-AUG-2024
DEFINITION  signal recognition particle 14 kDa protein [Gossypium hirsutum].
ACCESSION   XP_016693546
VERSION     XP_016693546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838057.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="signal recognition particle 14 kDa protein"
                     /calculated_mol_wt=13408
     Region          4..93
                     /region_name="SRP14"
                     /note="Signal recognition particle 14kD protein;
                     pfam02290"
                     /db_xref="CDD:460524"
     CDS             1..119
                     /gene="LOC107910266"
                     /coded_by="XM_016838057.2:223..582"
                     /db_xref="GeneID:107910266"
ORIGIN      
        1 mvllqpdpfl neltsmfers tetgsvwvtl krsslkskaq rnkmktaeqp ieyrclvrat
       61 ngkktistsv gakdhqrfqa syatilkahm talkkrerkd rkkaaedkke ggskkpkra
//
LOCUS       XP_016694167             443 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_016694167
VERSION     XP_016694167.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838678.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..443
                     /product="zinc finger CCCH domain-containing protein 6"
                     /calculated_mol_wt=47895
     CDS             1..443
                     /gene="LOC107910713"
                     /coded_by="XM_016838678.2:482..1813"
                     /db_xref="GeneID:107910713"
ORIGIN      
        1 mrgvhkskrv twasdvnlcq irlflseesp sqvgvggqdh lqaktslvsh ingatgddfl
       61 ppgfegahst shpqinllei atikwrcplr fildlnwqvv ageeseevei qnqrevrvle
      121 avyprpsaip tnssvsadve ncdyddqqtp qipitpiede daatetpiss qpqwlapgil
      181 pplrgsmpsv ssgsadekpa sgmilnvepg vaaaafaavn qnnesgnmid peflvkilsn
      241 prlieklvtd ygvasgaqnl pestsplats pnppppvnls npfpahinrt engtaslsat
      301 ssgaffaqpn gvgvgpsnkq gltpnphpis vspavglpqk kdvnyyknli qqhggerqep
      361 aqkfnsrynq hlrpnqelin ntklrdsrpk imkpcmyfns srgcrnganc ayqhdtsshq
      421 nsgnnvaevp ntkrmkmdre isg
//
LOCUS       XP_016668552             247 aa            linear   PLN 06-AUG-2024
DEFINITION  histone acetyltransferase TAP1 [Gossypium hirsutum].
ACCESSION   XP_016668552
VERSION     XP_016668552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..247
                     /product="histone acetyltransferase TAP1"
                     /calculated_mol_wt=27728
     Region          113..247
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
     CDS             1..247
                     /gene="LOC107888830"
                     /coded_by="XM_016813063.2:153..896"
                     /db_xref="GeneID:107888830"
ORIGIN      
        1 mlthnvaaps slcpilsndw hfhvsdqlif phnlnpnlfw rasrkikgcr lkasfwesir
       61 sgilknnttq iveppstlee eeeplpdefv lveksqpdge veqiifssgg dvdvyelqal
      121 cdkvgwprrp lsklaaalkn symvaalhsv kklpgsegne qkrligmara tsdhafnati
      181 wdvlvdpsyq gqglgkamve kmirtllqrd ignitlfads qvvefyrnlg fepdpegikg
      241 mfwypry
//
LOCUS       XP_016693198             357 aa            linear   PLN 06-AUG-2024
DEFINITION  aldo-keto reductase family 4 member C10 [Gossypium hirsutum].
ACCESSION   XP_016693198
VERSION     XP_016693198.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837709.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693198.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="aldo-keto reductase family 4 member C10"
                     /calculated_mol_wt=39177
     Region          8..319
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(23..25,48,53,81,114,164..165,186,212..216,221..222,
                     270,285..288,293,296..297)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(48,53,81,114)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
     CDS             1..357
                     /gene="LOC107909982"
                     /coded_by="XM_016837709.2:2336..3409"
                     /db_xref="GeneID:107909982"
ORIGIN      
        1 mkgktgnffv lntgakipai glgtwqsggd lcvdavktal svgyrhidca hlygnevevg
       61 ealaeafkgs lkredvflts klyctmnsln kienyvkvsl knlgvsyldl ylmhwpeisa
      121 fgdatdppsk sgserrqfls rlkkvwkame alvesglvra igvsnfsvpq ikellkftki
      181 vpavnqvelh pfwrqdelvk fcqskgihvs ahtplgvpts spgvsdsgsg gedepgtpri
      241 sfrrsrsvhg pmlklsvvge iadrhkktpe qvilrwgfqr gtsvlpcslk pdrikqnidi
      301 fnwslsddew krlnqiepqv clfgdgplnn lsgrglmfgs gplqavheie ddaesna
//
LOCUS       XP_016693199             357 aa            linear   PLN 06-AUG-2024
DEFINITION  aldo-keto reductase family 4 member C10 [Gossypium hirsutum].
ACCESSION   XP_016693199
VERSION     XP_016693199.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837710.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693199.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="aldo-keto reductase family 4 member C10"
                     /calculated_mol_wt=39177
     Region          8..319
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(23..25,48,53,81,114,164..165,186,212..216,221..222,
                     270,285..288,293,296..297)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(48,53,81,114)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
     CDS             1..357
                     /gene="LOC107909982"
                     /coded_by="XM_016837710.2:383..1456"
                     /db_xref="GeneID:107909982"
ORIGIN      
        1 mkgktgnffv lntgakipai glgtwqsggd lcvdavktal svgyrhidca hlygnevevg
       61 ealaeafkgs lkredvflts klyctmnsln kienyvkvsl knlgvsyldl ylmhwpeisa
      121 fgdatdppsk sgserrqfls rlkkvwkame alvesglvra igvsnfsvpq ikellkftki
      181 vpavnqvelh pfwrqdelvk fcqskgihvs ahtplgvpts spgvsdsgsg gedepgtpri
      241 sfrrsrsvhg pmlklsvvge iadrhkktpe qvilrwgfqr gtsvlpcslk pdrikqnidi
      301 fnwslsddew krlnqiepqv clfgdgplnn lsgrglmfgs gplqavheie ddaesna
//
LOCUS       XP_040944190             357 aa            linear   PLN 06-AUG-2024
DEFINITION  aldo-keto reductase family 4 member C10 [Gossypium hirsutum].
ACCESSION   XP_040944190
VERSION     XP_040944190.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088256.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="aldo-keto reductase family 4 member C10"
                     /calculated_mol_wt=39177
     Region          8..319
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(23..25,48,53,81,114,164..165,186,212..216,221..222,
                     270,285..288,293,296..297)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(48,53,81,114)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
     CDS             1..357
                     /gene="LOC107909982"
                     /coded_by="XM_041088256.1:319..1392"
                     /db_xref="GeneID:107909982"
ORIGIN      
        1 mkgktgnffv lntgakipai glgtwqsggd lcvdavktal svgyrhidca hlygnevevg
       61 ealaeafkgs lkredvflts klyctmnsln kienyvkvsl knlgvsyldl ylmhwpeisa
      121 fgdatdppsk sgserrqfls rlkkvwkame alvesglvra igvsnfsvpq ikellkftki
      181 vpavnqvelh pfwrqdelvk fcqskgihvs ahtplgvpts spgvsdsgsg gedepgtpri
      241 sfrrsrsvhg pmlklsvvge iadrhkktpe qvilrwgfqr gtsvlpcslk pdrikqnidi
      301 fnwslsddew krlnqiepqv clfgdgplnn lsgrglmfgs gplqavheie ddaesna
//
LOCUS       XP_016693201             159 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693201
VERSION     XP_016693201.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837712.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18094
     Region          75..>107
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     Region          107..>147
                     /region_name="PLN02979"
                     /note="glycolate oxidase"
                     /db_xref="CDD:166620"
     CDS             1..159
                     /gene="LOC107909983"
                     /coded_by="XM_016837712.2:123..602"
                     /db_xref="GeneID:107909983"
ORIGIN      
        1 msmpvrgkgk tdhcfdnvdh alslfnkmie kypkpsivef tklfativrm khyvivvsmc
       61 sqmellgvsh dvyslvverm lasegikgie lgrdefekrv wewkekfrpr ilidvnkidm
      121 tttvlgfkis mpimiaptam qkmahpedss letcgiqev
//
LOCUS       XP_040944191             453 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944191
VERSION     XP_040944191.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088257.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..453
                     /product="plant UBX domain-containing protein 7 isoform
                     X1"
                     /calculated_mol_wt=50223
     Region          11..48
                     /region_name="UBA_4"
                     /note="UBA-like domain; pfam14555"
                     /db_xref="CDD:464207"
     Region          172..284
                     /region_name="UAS"
                     /note="UAS family; UAS is a domain of unknown function.
                     Most members of this family are uncharacterized proteins
                     with similarity to FAS-associated factor 1 (FAF1) and ETEA
                     because of the presence of a UAS domain N-terminal to a
                     ubiquitin-associated UBX domain; cd02958"
                     /db_xref="CDD:239256"
     Region          377..450
                     /region_name="UBX"
                     /note="Ubiquitin regulatory domain X (UBX) structurally
                     similar to a beta-grasp ubiquitin-like fold; cd01767"
                     /db_xref="CDD:340466"
     CDS             1..453
                     /gene="LOC107909936"
                     /coded_by="XM_041088257.1:323..1684"
                     /db_xref="GeneID:107909936"
ORIGIN      
        1 megmlsasdk qsmvssflei avgqtaetam qflqatswkl dealqlfyvg neggvvgtas
       61 espavenvds wvdqnsgelk esgnsdvgpi ggeevrpplp vvretlydda slygasrlgl
      121 ppqqssslia frnfdeemkr pgvwesdega sstvdaprdn laslyrppfh lmfqgpfeka
      181 kaaasvedkw llvnlqstke fsshmlnrdt wgneavsqtv stnfifwqvy ddtsegrkvc
      241 tyykldsipv vlvidpitgq kmrswfgmvq peslledlvq fmdggprdyh atlshkrprg
      301 ssvtpqqkik vstdetnedk emlraiaasm enakesiktt eddkvsstte eepcltkkpa
      361 ypplpeepkg drnllcrvgv rlpdgrrvqr nflrtdpiql lwsfcysqlg eaeskpfrlt
      421 qpipgasksl dydskltfee sglansmisv awe
//
LOCUS       XP_016693136             453 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693136
VERSION     XP_016693136.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837647.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..453
                     /product="plant UBX domain-containing protein 7 isoform
                     X1"
                     /calculated_mol_wt=50223
     Region          11..48
                     /region_name="UBA_4"
                     /note="UBA-like domain; pfam14555"
                     /db_xref="CDD:464207"
     Region          172..284
                     /region_name="UAS"
                     /note="UAS family; UAS is a domain of unknown function.
                     Most members of this family are uncharacterized proteins
                     with similarity to FAS-associated factor 1 (FAF1) and ETEA
                     because of the presence of a UAS domain N-terminal to a
                     ubiquitin-associated UBX domain; cd02958"
                     /db_xref="CDD:239256"
     Region          377..450
                     /region_name="UBX"
                     /note="Ubiquitin regulatory domain X (UBX) structurally
                     similar to a beta-grasp ubiquitin-like fold; cd01767"
                     /db_xref="CDD:340466"
     CDS             1..453
                     /gene="LOC107909936"
                     /coded_by="XM_016837647.2:235..1596"
                     /db_xref="GeneID:107909936"
ORIGIN      
        1 megmlsasdk qsmvssflei avgqtaetam qflqatswkl dealqlfyvg neggvvgtas
       61 espavenvds wvdqnsgelk esgnsdvgpi ggeevrpplp vvretlydda slygasrlgl
      121 ppqqssslia frnfdeemkr pgvwesdega sstvdaprdn laslyrppfh lmfqgpfeka
      181 kaaasvedkw llvnlqstke fsshmlnrdt wgneavsqtv stnfifwqvy ddtsegrkvc
      241 tyykldsipv vlvidpitgq kmrswfgmvq peslledlvq fmdggprdyh atlshkrprg
      301 ssvtpqqkik vstdetnedk emlraiaasm enakesiktt eddkvsstte eepcltkkpa
      361 ypplpeepkg drnllcrvgv rlpdgrrvqr nflrtdpiql lwsfcysqlg eaeskpfrlt
      421 qpipgasksl dydskltfee sglansmisv awe
//
LOCUS       XP_040944192             430 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944192
VERSION     XP_040944192.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088258.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..430
                     /product="plant UBX domain-containing protein 7 isoform
                     X2"
                     /calculated_mol_wt=47528
     Region          11..48
                     /region_name="UBA_4"
                     /note="UBA-like domain; pfam14555"
                     /db_xref="CDD:464207"
     Region          172..261
                     /region_name="UAS"
                     /note="UAS family; UAS is a domain of unknown function.
                     Most members of this family are uncharacterized proteins
                     with similarity to FAS-associated factor 1 (FAF1) and ETEA
                     because of the presence of a UAS domain N-terminal to a
                     ubiquitin-associated UBX domain; cd02958"
                     /db_xref="CDD:239256"
     Region          354..427
                     /region_name="UBX"
                     /note="Ubiquitin regulatory domain X (UBX) structurally
                     similar to a beta-grasp ubiquitin-like fold; cd01767"
                     /db_xref="CDD:340466"
     CDS             1..430
                     /gene="LOC107909936"
                     /coded_by="XM_041088258.1:245..1537"
                     /db_xref="GeneID:107909936"
ORIGIN      
        1 megmlsasdk qsmvssflei avgqtaetam qflqatswkl dealqlfyvg neggvvgtas
       61 espavenvds wvdqnsgelk esgnsdvgpi ggeevrpplp vvretlydda slygasrlgl
      121 ppqqssslia frnfdeemkr pgvwesdega sstvdaprdn laslyrppfh lmfqgpfeka
      181 kaaasvedkw llvnlqstke fsshmvyddt segrkvctyy kldsipvvlv idpitgqkmr
      241 swfgmvqpes lledlvqfmd ggprdyhatl shkrprgssv tpqqkikvst detnedkeml
      301 raiaasmena kesikttedd kvsstteeep cltkkpaypp lpeepkgdrn llcrvgvrlp
      361 dgrrvqrnfl rtdpiqllws fcysqlgeae skpfrltqpi pgasksldyd skltfeesgl
      421 ansmisvawe
//
LOCUS       XP_016693976             590 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693976
VERSION     XP_016693976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838487.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..590
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=64754
     CDS             1..590
                     /gene="LOC107910599"
                     /coded_by="XM_016838487.2:175..1947"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqdkskin nwgessecsq delfencrgl dnvesnglgk kracidgdkn
      541 dcsmldakil rstkhlikvl prrsmrlisk vqfcaflcha iicgifplvk
//
LOCUS       XP_016693978             579 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693978
VERSION     XP_016693978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838489.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..579
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=63429
     CDS             1..579
                     /gene="LOC107910599"
                     /coded_by="XM_016838489.2:175..1914"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqdkskin nwgessegld nvesnglgkk racidgdknd csmldakilr
      541 stkhlikvlp rrsmrliskv qfcaflchai icgifplvk
//
LOCUS       XP_016693980             570 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693980
VERSION     XP_016693980.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..570
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=62549
     CDS             1..570
                     /gene="LOC107910599"
                     /coded_by="XM_016838491.2:175..1887"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqdkskin nwgessecsq delfencrgl dnvesnglgk kracidgdkn
      541 dcsmldakil rstkhlikvl prrsmrlisk
//
LOCUS       XP_040944193             559 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944193
VERSION     XP_040944193.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088259.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..559
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=61224
     CDS             1..559
                     /gene="LOC107910599"
                     /coded_by="XM_041088259.1:175..1854"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqdkskin nwgessegld nvesnglgkk racidgdknd csmldakilr
      541 stkhlikvlp rrsmrlisk
//
LOCUS       XP_016693981             547 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693981
VERSION     XP_016693981.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838492.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..547
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=59899
     CDS             1..547
                     /gene="LOC107910599"
                     /coded_by="XM_016838492.2:157..1800"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 mqnqrlvsmt sgerlygiqe aghplslklq lqpgaslntl rdagkdhygl iscpldrcng
       61 gnysqavqcn algcctgdkf yhkdgggggs ilfqqrphsh fvsqyddsgf knkefqtiss
      121 nrdclslsrd rrmndmpqig hedtgvaacf dgpffpssin tstvsppsfq fhvsseegin
      181 lyvdlnsnps ewieklksev sicqdmshck sktspkelgr fgesskqmer sfqlnvdtge
      241 mkddfihsgl ppnliikets slqfdhpdgd ngsfdsavmv pcgravdlse hlegdrgltl
      301 vrahpdsqeq iisaiapcak drclvapnsn inslreklgg daalnisngp lsllrkenei
      361 censtpqssc hlvssgrmvp gcqpdgsllm qkpedvvhqk dalyspgdng efvdlvdpkh
      421 kfyadqggla gstdlnqgtf rtrlptlvee qdkskinnwg essecsqdel fencrgldnv
      481 esnglgkkra cidgdkndcs mldakilrst khlikvlprr smrliskvqf caflchaiic
      541 gifplvk
//
LOCUS       XP_016693982             502 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693982
VERSION     XP_016693982.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838493.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..502
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=54785
     CDS             1..502
                     /gene="LOC107910599"
                     /coded_by="XM_016838493.2:175..1683"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqdpsisc vl
//
LOCUS       XP_040944194             498 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944194
VERSION     XP_040944194.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088260.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..498
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=54472
     CDS             1..498
                     /gene="LOC107910599"
                     /coded_by="XM_041088260.1:175..1671"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqmltr
//
LOCUS       XP_016693986             496 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693986
VERSION     XP_016693986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838497.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..496
                     /product="uncharacterized protein isoform X8"
                     /calculated_mol_wt=54228
     CDS             1..496
                     /gene="LOC107910599"
                     /coded_by="XM_016838497.2:175..1665"
                     /db_xref="GeneID:107910599"
ORIGIN      
        1 menkedegfc hslsrkelqs lckkyglpan rshsdmaksl asylenqrlv smtsgerlyg
       61 iqeaghplsl klqlqpgasl ntlrdagkdh ygliscpldr cnggnysqav qcnalgcctg
      121 dkfyhkdggg ggsilfqqrp hshfvsqydd sgfknkefqt issnrdclsl srdrrmndmp
      181 qighedtgva acfdgpffps sintstvspp sfqfhvssee ginlyvdlns npsewieklk
      241 sevsicqdms hcksktspke lgrfgesskq mersfqlnvd tgemkddfih sglppnliik
      301 etsslqfdhp dgdngsfdsa vmvpcgravd lsehlegdrg ltlvrahpds qeqiisaiap
      361 cakdrclvap nsninslrek lggdaalnis ngplsllrke neicenstpq sschlvssgr
      421 mvpgcqpdgs llmqkpedvv hqkdalyspg dngefvdlvd pkhkfyadqg glagstdlnq
      481 gtfrtrlptl veeqrt
//
LOCUS       XP_016691112             258 aa            linear   PLN 06-AUG-2024
DEFINITION  sphinganine C4-monooxygenase 1 [Gossypium hirsutum].
ACCESSION   XP_016691112
VERSION     XP_016691112.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835623.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691112.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..258
                     /product="sphinganine C4-monooxygenase 1"
                     /calculated_mol_wt=29310
     Region          97..233
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; pfam04116"
                     /db_xref="CDD:397991"
     CDS             1..258
                     /gene="LOC107908451"
                     /coded_by="XM_016835623.2:524..1300"
                     /db_xref="GeneID:107908451"
ORIGIN      
        1 mgfavsdell gtvvpivvyw iysgmymclg sfenyrlhsk sdeeeknlvs kltvvkgvlf
       61 qqllqaavai llftvtggha gassqqpssf ivlasqfvta mlvmdtwqyf lhryfhenkf
      121 lyrhlhsrhh clvvpyafga lynhplegll ldtvggalsf mlsgmsprts iyffsfatik
      181 tvddhcglml pgnplhiffr nnsayhdvhh qlygskynfs qpffvmwdri lgtympysle
      241 kraeggfear ptkefked
//
LOCUS       XP_016691111             473 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYTOCHROME KINASE SUBSTRATE 1 [Gossypium hirsutum].
ACCESSION   XP_016691111
VERSION     XP_016691111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835622.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..473
                     /product="protein PHYTOCHROME KINASE SUBSTRATE 1"
                     /calculated_mol_wt=51360
     CDS             1..473
                     /gene="LOC107908450"
                     /coded_by="XM_016835622.2:169..1590"
                     /db_xref="GeneID:107908450"
ORIGIN      
        1 mamvtltsny ntnlsqtlsf eeknsslrdv sfstffddae enyvrklsas nrelsskttn
       61 tkqdehhylg lkkeddgeig vfgaekyfng gidlesprii kihaktlecv kdgrvsiepv
      121 kpviyqgtps vrsesswnsr sallrstmrn ppakkppkvn gksflsglag ckfycsgrns
      181 vdieeaqvge isfkrpaang eglqgkpnkt asskaslevn kpvaepwtke difsfptmns
      241 tlgirpvevs lkgdvdeigr kslevfgspa lgkrnkslni errlqmfsld snpkaekien
      301 pkgnyndtes dassdlfeie sltgkvnpfl vkqisdaasg catpttcyap seasiewsvv
      361 tasaadfsvm sdyeelrppv tfpspmrtyp attktkgskn kgrssgllgc nsqkavevag
      421 dtqktndkag fdprmrsvsd syipatrfga gtklaaafqp thtagasrll fiq
//
LOCUS       XP_016693547             209 aa            linear   PLN 06-AUG-2024
DEFINITION  trigger factor [Gossypium hirsutum].
ACCESSION   XP_016693547
VERSION     XP_016693547.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838058.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="trigger factor"
                     /calculated_mol_wt=23592
     CDS             1..209
                     /gene="LOC107910267"
                     /coded_by="XM_016838058.2:99..728"
                     /db_xref="GeneID:107910267"
ORIGIN      
        1 mevavgktlw lglnpkiisc kqekgifvsn tfcrracfpp riryrtlkfh grkrheylrp
       61 ahaissdved vgvssqfedf tvtpcstees rklkirvevs gaktraifne vfdkmvadaq
      121 pipgfrrvkg gktpniprei llevlgaskv ykqvitrvin stvseyaeke slsvgkdlrv
      181 eqsiedleei fepdeifsfd aviqlqqsn
//
LOCUS       XP_016693994             826 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein PCN [Gossypium hirsutum].
ACCESSION   XP_016693994
VERSION     XP_016693994.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838505.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693994.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..826
                     /product="WD repeat-containing protein PCN"
                     /calculated_mol_wt=91512
     Region          <15..326
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          18..58
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          66..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          202..621
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          211..245
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..826
                     /gene="LOC107910603"
                     /coded_by="XM_016838505.2:203..2683"
                     /db_xref="GeneID:107910603"
ORIGIN      
        1 mllkpyrtss vdwkpspvva latsaddsql aaaredgsle iwlvspgsvg whhqltihgd
       61 stcrvsslvw ccvgseglss grlfsssidg svsewdlfnl kqkivlesig vsiwqmavap
      121 viklpapeep scwhsgngfl ndkygysdsd daenyqseda sdseqvhqkl vtddrrvaia
      181 cddgavriyt isnldkfiyh kslprvsgra lsvtwshdsn riysgssdgl ircwnvdlgr
      241 eifstvalgg lgsgpelciw sllslrcgtv vsadstgsvq fwsgdngtll qahsnhkgdv
      301 nalaaapsqn rvfsagsdgq vilyelctek lqsyndksss emmkkwvyvg nvrahthdvr
      361 altmavpiss egslsdegrd lqdekerkvk kirfkgkkll dfsysklarf rvpmlvsagd
      421 daklfaysak eftrfsphdv cpapqrvpvq lvvntrfsqt sfllvqassw ldvlcvrvpd
      481 vgsgpyggla ttnlvarvks klsrkivcsa msnsgellgy sdqirpslfa lsrqagestw
      541 tiskrqlpqd lpsahsmaft cdgvrlliag hdrriyivdl eglellhtfi lcrgehdkeg
      601 slgdppitkm ftsfdsqwla aincfgdiyi fnleiqrqhw fisrlngasv taggfppqdn
      661 niliittssn qfyifdvear qlgewsmqhl ftlpkryqef pgeviglsfc psssshptks
      721 ssllvystra mcsidfgkpv deydeselvn gallkfqgsl tnmkwkhwlr esrqsrknnf
      781 dlvvfrdpvl fighlskhsi liidkpwmev vksfdsaqlq rhifgt
//
LOCUS       XP_016714365             478 aa            linear   PLN 06-AUG-2024
DEFINITION  anthocyanidin 3-O-glucosyltransferase 5 [Gossypium hirsutum].
ACCESSION   XP_016714365
VERSION     XP_016714365.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016858876.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016714365.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..478
                     /product="anthocyanidin 3-O-glucosyltransferase 5"
                     /calculated_mol_wt=52211
     Region          7..467
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(18,20,174,177..178,182,205,276,365,367,369..370,373)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            18
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     Site            order(276,365,367,369..370)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     CDS             1..478
                     /gene="LOC107927767"
                     /coded_by="XM_016858876.2:1..1437"
                     /db_xref="GeneID:107927767"
ORIGIN      
        1 mvqsnqkphl vllsapahlq pvielgkrlv tcqdvkatii vasfvqsapa esrmvqaala
       61 tklfdvihlp padisnlvep gdkgitslsa amhvvkpdfq aailgletlp talvvhvfai
      121 eclgiadelk ipkyvfvstn awflativyt pvldkevege yadkkepfal pgcssiraed
      181 lpdpmllrtk anyreylkig meipkadgil vnsweelqpk tlaslrdgnl lagvvkapif
      241 pvgpinsegs salknelfdw ldkqptdsvl yisfgsmggl sleqmlelaw glelsqqrfi
      301 wvvrppieks gsgsgpkfgn igddvssylp egfisrirdr gvivpqwapq veilshpscg
      361 gffthcgwns aiecitnglp miawplyaeq rmnatlltee mgiavrsetl pskgivgree
      421 iekmvrkifv deagrqmrar vkelklsaek awsndgssyd alakmvkhsq kkaiaidv
//
LOCUS       XP_040944195             491 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_040944195
VERSION     XP_040944195.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088261.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="receptor-like protein 6"
                     /calculated_mol_wt=55241
     Region          35..79
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          64..>483
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          107..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          178..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          250..273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          274..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          323..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          347..373
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          374..444
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          445..467
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          468..486
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..491
                     /gene="LOC107927701"
                     /coded_by="XM_041088261.1:1..1476"
                     /db_xref="GeneID:107927701"
ORIGIN      
        1 mdtlhflisl flfscflslv lpfsppqthl pkqclddqra pllqlqhhly yapnftfssk
       61 fdlwdvntdc cswegvtcda yghvvgidls yknlsgsfhs ifdlhrlqhl nlagnnfntt
      121 vfvwvhisfl sklildgnai sylppnflvn ssrlvslsls acnlngqfpt gilllpkiqs
      181 idissndqlm gqlpefpvnn allslslhdt nfsgklphsi gnlkfltnle lyycnffgpi
      241 pssianlshl vnfdlssnkl sgsihsslft lpllktlylg enqlvgkide fpnassssie
      301 rlyignnylt glipksilql pslerlyieg nsfstmkldm fvqlnnlrtl wlnnisllie
      361 sdnrsltfpq leslrvrscn ltefpgfinr qdklvdldls nnhihgvvpn wlwksslsrv
      421 dlsfnmidfp kqlplndanf sfpmltelnl gscnisafpe fiktqdklvv ldlsnnhihg
      481 vvpnwlwkss l
//
LOCUS       XP_016724415             141 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-CoA delta isomerase 2, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016724415
VERSION     XP_016724415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868926.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..141
                     /product="enoyl-CoA delta isomerase 2, peroxisomal"
                     /calculated_mol_wt=15336
     Region          <1..141
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(2,23..26,39..42,49,51..53,55..56,61..62,63..64,
                     66..67,70,81,84,104,107)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..141
                     /gene="LOC107936235"
                     /coded_by="XM_016868926.1:1..426"
                     /db_xref="GeneID:107936235"
ORIGIN      
        1 mptvaavngh asaagvvipl chdyvvmrrd rgvlyvndle mglkipelym affraktsgw
       61 alrdlvlrgl kikgeellkm givdavydge egvtnagmkm addlarrkwd gevyaeirkg
      121 lysefcgmlg iaskaigtpk l
//
LOCUS       XP_016724402             234 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-CoA delta isomerase 2, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016724402
VERSION     XP_016724402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868913.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="enoyl-CoA delta isomerase 2, peroxisomal"
                     /calculated_mol_wt=25582
     Region          1..229
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(21,23,56,60..64,108,110..112,135..136,139)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(62,112)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(92,100,121..124,137..140,146,148..150,152..153,
                     158..159,161..162,164..165,168,179,182,198,201..202)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..234
                     /gene="LOC107936221"
                     /coded_by="XM_016868913.2:1..705"
                     /db_xref="GeneID:107936221"
ORIGIN      
        1 mcslekrgnl fililtgqng ehrlnpnlfs siisalsrak aestrgsalv tvshgkffcn
       61 gfdldwvnaa gsdeetqqrf nllldnlkql vlafislpmp tiaavnghaa aggvvlalch
      121 dyvlmrrhrs vlymidldlg ikipepfmal frakisgsar rdlllrglki kgeealkmgi
      181 veavydgeee vtnagikmad dlakrnwhge vyaeirkgly selcdilgia sipi
//
LOCUS       XP_016724414             433 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724414
VERSION     XP_016724414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868925.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..433
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48506
     Region          108..213
                     /region_name="DIOX_N"
                     /note="non-haem dioxygenase in morphine synthesis
                     N-terminal; pfam14226"
                     /db_xref="CDD:464110"
     CDS             1..433
                     /gene="LOC107936234"
                     /coded_by="XM_016868925.1:1..1302"
                     /db_xref="GeneID:107936234"
ORIGIN      
        1 mgdfnpkplt ivencrspqt edhrsppnis dnrrspstta dhsmgpnsni ilndnnhiaa
       61 cvnkafddlk agvkgidsgv tkiprifidq giileknntd csnnqlsvpi ialqgineds
      121 alraevinqv rnacanwgff qvihhgipvs vldemidgic qfheqntevk kqfytrdatr
      181 kvlylrnydl ykpkatnwrd slgcimsldd pahpqsclkf aednmstiif sgrvhqilck
      241 svsrtifvkl lgrkigyhai snkiyslwkp sttimimdle ndyylvklhe eagyvraftk
      301 gvlgfmyrrs viksigeivc eavsnikmdg rvqkveyesl pnvcfacgyy gpmkklspal
      361 yfqekqggve eygpwmivdl wsmradqskg sskddkvsan lqgsqfnalq dfrenelgdv
      421 qisklgiiak skg
//
LOCUS       XP_016724412             341 aa            linear   PLN 06-AUG-2024
DEFINITION  glycine-rich cell wall structural protein-like [Gossypium
            hirsutum].
ACCESSION   XP_016724412
VERSION     XP_016724412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868923.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..341
                     /product="glycine-rich cell wall structural protein-like"
                     /calculated_mol_wt=30319
     CDS             1..341
                     /gene="LOC107936232"
                     /coded_by="XM_016868923.2:1..1026"
                     /db_xref="GeneID:107936232"
ORIGIN      
        1 mvrdyilngm iqglmgrwwv eqvarrqkqm aarsrcgarv svsetlvwlg ltywaggngf
       61 gawdkgrfyg ghgvardgig gtgngvgfgg trtsvvgggi gagtgsdgae aragigigik
      121 krdgvgaggg iggaggggtg gaggggtgtg iggggagart gsdgvgagig iggggtrtkn
      181 gdgvgygagg gtggargvgg dgtgtgsgig tgtgtgtgge tgaggggtga gtggggggtg
      241 tragtggigt giggggigtg gsgagagtgi gigggfgasf gfrrsgvras fgagfglgrg
      301 gtetgagtes ggasgvgkas gggtggvgae gengdgenry h
//
LOCUS       XP_040944196             274 aa            linear   PLN 06-AUG-2024
DEFINITION  BSD domain-containing protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944196
VERSION     XP_040944196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088262.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..274
                     /product="BSD domain-containing protein 1"
                     /calculated_mol_wt=30863
     Region          214..267
                     /region_name="BSD"
                     /note="BSD domain; pfam03909"
                     /db_xref="CDD:461089"
     CDS             1..274
                     /gene="LOC121214503"
                     /coded_by="XM_041088262.1:1..825"
                     /db_xref="GeneID:121214503"
ORIGIN      
        1 mawakgprkk egsfslflsq lnlcnpqwis snlylsddvq pqspepptep spnlgssstw
       61 sfgglvktla sksesviesy rkdfeelgsg lkketeiiks vvsravtdsl dtgasvaqek
      121 lesvgqaidd igssvwksta qiishgkdtf lspsddydsd pensrnrkln insnsvnekr
      181 ysrfemqira lqlsrityca epedledygn wklginledk rgeiedllne nsavqdifre
      241 vesnefeykr ywsnyfykls elikaeeara klvk
//
LOCUS       XP_040944197             227 aa            linear   PLN 06-AUG-2024
DEFINITION  putative B3 domain-containing protein At3g24850 [Gossypium
            hirsutum].
ACCESSION   XP_040944197
VERSION     XP_040944197.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088263.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="putative B3 domain-containing protein At3g24850"
                     /calculated_mol_wt=25773
     Region          102..199
                     /region_name="At2g31720-like"
                     /note="B3 domain-containing protein At2g31720-like;
                     pfam03754"
                     /db_xref="CDD:281714"
     CDS             1..227
                     /gene="LOC107932130"
                     /coded_by="XM_041088263.1:1..684"
                     /db_xref="GeneID:107932130"
ORIGIN      
        1 mmellslddf kdtkidpnwg pfdyllhvlh vdqqkmlksq nappppqtlc kqdhagrnlk
       61 aveeeddgyg drvapklkpk rskkqeksvc pipppdlppl frqliveemg grglvlviqk
      121 tiffsdinpt asrfsipfsq vkthdflnga eakelddkns mqvwlldpsm rgtsitlnkw
      181 vmrssslyvl tntwnplvkn nqlkkgdmvq lwsfrvnsll cfalvkl
//
LOCUS       XP_016719571             243 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein At1g05920 [Gossypium hirsutum].
ACCESSION   XP_016719571
VERSION     XP_016719571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864082.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="B3 domain-containing protein At1g05920"
                     /calculated_mol_wt=27650
     Region          118..215
                     /region_name="At2g31720-like"
                     /note="B3 domain-containing protein At2g31720-like;
                     pfam03754"
                     /db_xref="CDD:281714"
     CDS             1..243
                     /gene="LOC107932131"
                     /coded_by="XM_016864082.1:1..732"
                     /db_xref="GeneID:107932131"
ORIGIN      
        1 mmellslddf kdtkidpnwg pfdyllhvlh vdqqkmlksq nappppktlc kqdhtgfklr
       61 skfnnsvglk rkrnlkavee eddgygdrva pklkpkrskk qeksvcpipp pdlpplfrql
      121 iveemggrgl vlviqktiff sdinpaasrf sipfsqvkth dflneaeake lddknsmqvw
      181 lldpsmrgts itlnkwvmgs sslyvltntw nplvknnqlk kgdmvqlwsf rvnsllcfal
      241 vkl
//
LOCUS       XP_040944199             349 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14103 [Gossypium hirsutum].
ACCESSION   XP_040944199
VERSION     XP_040944199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088265.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="F-box/LRR-repeat protein At4g14103"
                     /calculated_mol_wt=39425
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          143..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          166..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          190..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          212..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          288..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..349
                     /gene="LOC107932136"
                     /coded_by="XM_041088265.1:112..1161"
                     /db_xref="GeneID:107932136"
ORIGIN      
        1 mavcvedris sfpdpilchi lsflpikeav rtsiistkwr ylfasmstie fdacsmsglt
       61 drnidsfknf vdrllkspdq vrldcfrlsh micswndwnd gdhdfdisgw icaalcrgvk
      121 eidlqlsyre dilpavlftc gslvtlklda vghnfkfpsd vclgnlktlh frdsffgdsv
      181 lrfisnchvl edlafiecdf ytseiniqtp slkrfildfn lgefadlkyv vvinapnliy
      241 fqctdavaqg ytlstmksle kahisicdcd tidsqaiaah liqgicnvrs irlsinegif
      301 rpsscvqifr tsqlpifhnl iefeflgrgf ngreiwlliv lvsitstit
//
LOCUS       XP_040944200             385 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14103 [Gossypium hirsutum].
ACCESSION   XP_040944200
VERSION     XP_040944200.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088266.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="F-box/LRR-repeat protein At4g14103"
                     /calculated_mol_wt=43873
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          140..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          163..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          211..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          286..307
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..385
                     /gene="LOC107943978"
                     /coded_by="XM_041088266.1:80..1237"
                     /db_xref="GeneID:107943978"
ORIGIN      
        1 mamcvedris sfpdpilchi lsflpikeav rtsiistkwr ylfasistik fdgysmsglt
       61 drnidnfknf vdrllkspdq vrldcfrlsh eicswndgdh dfdisgwica alcrgvkeid
      121 lqlsyledil pavlftcgsl vtlkldavgh kfkfpsdvcl gnlktlhfrd sffgdysilr
      181 lisnchvled lafiecdfyn tsvlniqtps lkrfildfdl gefgdlkyvv vinapnliyf
      241 qctdavaqgy tlstmkslek ahisicncdt idsqtiathl iqvcnvrslr ltineifrts
      301 klpifhnlie feflgrgfng reiwlveflh rmpnlktltl nfpvvagtqw kalevpscls
      361 fhlkeieisr fnthmidmev sisnl
//
LOCUS       XP_016719574             190 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At3g59200 [Gossypium hirsutum].
ACCESSION   XP_016719574
VERSION     XP_016719574.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016864085.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016719574.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="F-box/LRR-repeat protein At3g59200"
                     /calculated_mol_wt=21528
     Region          7..42
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(10,14,17..18,21..22,26,28..29,33..35,37)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     CDS             1..190
                     /gene="LOC107932133"
                     /coded_by="XM_016864085.2:1..573"
                     /db_xref="GeneID:107932133"
ORIGIN      
        1 mcvedrissf pdpilchils flpikeavrt siistkwryl fasistikfd gysmsgltdr
       61 nidsfknfvd rllkspdqvn ldcfrlshei cswndgdhdf disgwicaal crgvkeidlq
      121 lgyledilpa vlftcgslvt lkldavghkf kfpsdvclgn lktlhirdsf fgdsifrlis
      181 nchvrrfgfy
//
LOCUS       XP_040944201             384 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14103 [Gossypium hirsutum].
ACCESSION   XP_040944201
VERSION     XP_040944201.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088267.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="F-box/LRR-repeat protein At4g14103"
                     /calculated_mol_wt=43566
     Region          7..42
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(10,14,17..18,21..22,26,28..29,33..35,37)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          138..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          185..207
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          208..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          284..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..384
                     /gene="LOC107932134"
                     /coded_by="XM_041088267.1:1..1155"
                     /db_xref="GeneID:107932134"
ORIGIN      
        1 mcvedrissf pdpilchils flpikeavqt siistkwryl fasistikfd gysmsgltdr
       61 nidsfknfvd rllkspdqvr ldcfrlshei clwndgdhdf disgwicaal crgvkeidlq
      121 lgyledilpa vlftcgslvt lkldavghkf kfpsdvclgn lktlhfrdsf fgdcilrfis
      181 nchvledlaf iecdfyntsv iniqtpllkr fildfdlgef gdlkyvvlin apnlvyfqyt
      241 dvvaqgytls tmkslekahi sisgcgtids qtiathfiqg icnvrslrlt inegvfrtsq
      301 lpifhnlief eflgrgfngr eiwlveflhr mpnlktltin fpvvagtqwk afevpsclsf
      361 hlkeievscf sthiiemevs isnl
//
LOCUS       XP_040944202             301 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/LRR-repeat protein At4g14103 [Gossypium hirsutum].
ACCESSION   XP_040944202
VERSION     XP_040944202.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088268.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..301
                     /product="F-box/LRR-repeat protein At4g14103"
                     /calculated_mol_wt=34110
     Region          9..44
                     /region_name="F-box_AtFBL13-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     F-box/LRR-repeat protein 13 (AtARP13), 25 (AtARP25) and
                     similar proteins; cd22160"
                     /db_xref="CDD:438931"
     Site            order(12,16,19..20,23..24,28,30..31,35..37,39)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438931"
     Region          143..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          166..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          190..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          213..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          262..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     CDS             1..301
                     /gene="LOC121214504"
                     /coded_by="XM_041088268.1:142..1047"
                     /db_xref="GeneID:121214504"
ORIGIN      
        1 mamcvedris sfpdpilchi lsflpikqav rtsiistkwr ylfaslstik fdaysmsdlt
       61 drnvdsfknf vdrllkspdq vrldcfrlsh micswndwnd gdhdfdisgw icsalcrgvk
      121 eidlqlsyre dilpavlftc gslvtlklda vghnfefpsd vclgnlktlh frdsffgdsv
      181 lrfisnchvl edlaffecdf yntsviniqt pslkrfildf nlgefadlky vvvinapnlv
      241 yfqytdvvaq gytlstmksl ekahikicgv dtidsqaiaa hliqgicnvr slrltinegi
      301 f
//
LOCUS       XP_040944203             192 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944203
VERSION     XP_040944203.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088269.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..192
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22618
     Region          <2..84
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     CDS             1..192
                     /gene="LOC121214505"
                     /coded_by="XM_041088269.1:1..579"
                     /db_xref="GeneID:121214505"
ORIGIN      
        1 maeyeacimg iraaierkik vlevyedsal viyklkgewe trdpklvryq nlvlelieef
       61 dsvtfcylpr denqmadala tlasmfkvnk pedmkpiqts iheapahcyn idneeekddh
      121 pwyndilryv ksreypdhat endkrtlrrl aidyvldeei lykkgkdqri ekkpylstlg
      181 lqweiddtnf ms
//
LOCUS       XP_016691069             396 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription termination factor MTERF6,
            chloroplastic/mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016691069
VERSION     XP_016691069.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835580.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="transcription termination factor MTERF6,
                     chloroplastic/mitochondrial"
                     /calculated_mol_wt=45548
     Region          83..356
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..396
                     /gene="LOC107908420"
                     /coded_by="XM_016835580.2:1..1191"
                     /db_xref="GeneID:107908420"
ORIGIN      
        1 mfnpysknii dffkllynvt nnpfsnnpsl fftirsfsna sldqsrsftv syltnnlgfs
       61 pesalkaskc vrfktpqnad tvitflekyg fsdtqirkii evrphllrsd lektilpkih
      121 ffqskgganp disklllhnp rlfshslkkl iipcfnqlss flqsdskaii alrrnpflip
      181 cnfdvymlpn vktlldngvp esnittmfny hprafvmspd qfkeivkdvk emgfnplllk
      241 flhavilfrk vsksamegkf dvykkwgwsd eeiwkafrkf pgvlepskek itaimdflvn
      301 emgfesliia nhpsivsrsl eklivpralf arellskgli kdlrfsvvfg tsekvfvqrf
      361 vnkykdkape llklyeekle favrgeyksn rascrt
//
LOCUS       XP_040944204             423 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944204
VERSION     XP_040944204.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088270.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="uncharacterized protein"
                     /calculated_mol_wt=47904
     CDS             1..423
                     /gene="LOC121214506"
                     /coded_by="XM_041088270.1:1..1272"
                     /db_xref="GeneID:121214506"
ORIGIN      
        1 mekktnesfr qyarrwreva aqvqppllkk eitmlfinnl kapflnhmlg satksfsdiv
       61 msgemienai rcgkieages akrsaprkke qeinntsmfn kdhsktitvg qaravtanrq
      121 gsskqesnpr pnverlqftp ipvtyrelyq nlfdahvvsp yylkpmqppy pkwyeanaqc
      181 eyhagtkghs ienctafkkl veklinlgiv kigdssgpnv aenplpnhdn kgvnaiieng
      241 rkrvkanvae irtplewvwk qmvkrglikq nsikrpegvr kfcefhaeeg hdiqkctefr
      301 tmvqslmdrk elefyeeine lvegevyate egstgkaqka nypvdsktvp wnyncnvtil
      361 geeslvnvsg edegfytrsg krydpanarv esgkgkalav elgkaktepr inqpvtemrl
      421 mnf
//
LOCUS       XP_040944206             629 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944206
VERSION     XP_040944206.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088272.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..629
                     /product="uncharacterized protein"
                     /calculated_mol_wt=71777
     Region          <97..177
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            102
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     Region          240..>300
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     Region          354..478
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(359..362,392..394,397,421,461,475)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..629
                     /gene="LOC121214507"
                     /coded_by="XM_041088272.1:1..1890"
                     /db_xref="GeneID:121214507"
ORIGIN      
        1 mysglrtprk ktaeemlgnl sinaifeeks eegstsgiyp vepgseekqi lpheetietm
       61 ileegkviki gtciaeevkq dlvkllrefk dvfawsyqdm pglratyqra mvtlfhdmmh
      121 kelevyvddm iakskteeeh vqvlkklfmr lrkfqlklnl akctfgvrsg kllgfvvser
      181 gieidpdkvr aiqelpppht qkevrgflgr lnyiaqfisq ltekcdpifr lfkkhnpsvw
      241 deecqktfek vkhylsnapv lmppcpdkpl ilylavfkns mgrvlgqhde sgrkereiyy
      301 liyvnekavk gsaiaeflas ralddyepln fdfpnedlvy iatvekdfqe ggpwrlsfdg
      361 alnaigngig avlvspsgdy ypftskldfd ctnnmavyea cimgiraaie rkikvlevyg
      421 dsalviyqlk gewetrdpkl vryrklvmel ieefdsitfs ylprdenqma dalatlasmf
      481 kvnkledmkp iqisiyeapa hccsidneeg kddhpwyydi lryvksreyp dhatendkkt
      541 lkrlaidyvl dgeilykkgk dqvllrcvda veakeileev hegicgthan gftiarqimr
      601 fgtstgatpf slvygmetvl pieveipsl
//
LOCUS       XP_016690484             205 aa            linear   PLN 06-AUG-2024
DEFINITION  major allergen Pru av 1 [Gossypium hirsutum].
ACCESSION   XP_016690484
VERSION     XP_016690484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834995.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="major allergen Pru av 1"
                     /calculated_mol_wt=23122
     Region          4..153
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,39,57,59..60,65,68,70,82,84,86,
                     90..91,99,101,103,105,115,117,119,121,133..134,136..137,
                     140..141,143,145..146)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            47..55
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..205
                     /gene="LOC107907660"
                     /coded_by="XM_016834995.1:1..618"
                     /db_xref="GeneID:107907660"
ORIGIN      
        1 mggftyesev itsipppkmf kacildgdtl ipkivpqvfk sveyiegnge pgsirkvtfa
       61 qgnqfnymkq kvealdrekf eyiysviegd plmnmldkit yeikleaspg ggsmcktssk
      121 yytigdielk eeaikagkek asgvlfkaie aylllehwqh tsikfasrak rnrsrkenkq
      181 nnkmklecta eifnfqhlla npdaf
//
LOCUS       XP_040944207             157 aa            linear   PLN 06-AUG-2024
DEFINITION  major strawberry allergen Fra a 1.05-like [Gossypium hirsutum].
ACCESSION   XP_040944207
VERSION     XP_040944207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088273.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..157
                     /product="major strawberry allergen Fra a 1.05-like"
                     /calculated_mol_wt=17387
     Region          4..150
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(6,10,23..24,27,31,40,58,60..61,67,69,81,83,85,
                     89..90,98,100,102,104,114,116,118,120,132..133,135..136,
                     139..140,142..144)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            48..56
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..157
                     /gene="LOC107907659"
                     /coded_by="XM_041088273.1:1..474"
                     /db_xref="GeneID:107907659"
ORIGIN      
        1 mgiftyqyev iteippakmf kacildgenr ipkvvpdqaf ksidyiegng epgsikkitf
       61 eeashymvek veasdkdelv ysysviegnv fmnklekity etklepssag gsiskiscky
      121 ytigdfgite eglkagkeka lqilkavday ilanprh
//
LOCUS       XP_016690481             195 aa            linear   PLN 06-AUG-2024
DEFINITION  major strawberry allergen Fra a 1.06, partial [Gossypium hirsutum].
ACCESSION   XP_016690481
VERSION     XP_016690481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834992.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..195
                     /product="major strawberry allergen Fra a 1.06"
     Region          1..147
                     /region_name="Bet_v1-like"
                     /note="Ligand-binding bet_v_1 domain of major pollen
                     allergen of white birch (Betula verrucosa), Bet v 1, and
                     related proteins; cd07816"
                     /db_xref="CDD:176858"
     Site            order(2,6,19..20,23,27,35,53,55..56,61,64,66,78,80,82,
                     86..87,95,97,99,101,111,113,115,117,129..130,132..133,
                     136..137,139..141)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            43..51
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..195
                     /gene="LOC107907656"
                     /coded_by="XM_016834992.1:<1..588"
                     /db_xref="GeneID:107907656"
ORIGIN      
        1 tyesvvitai ppekmfkaci lngdtlihki vsqafksvey iegngeagsi kkvtfregsq
       61 fkymkqkvea idkenfvyiy nvvegdalkt klekityetk leaspdwgsv crttskyyti
      121 gdfelkedgv kagkdkalgi fkaieayile npnayckypn ieiastacne yqtiaffllv
      181 fgvaaydlqt ankss
//
LOCUS       XP_040944208             148 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944208
VERSION     XP_040944208.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088274.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..148
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16355
     Region          4..125
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     Site            order(7..10,44..45,48,72,111,125)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..148
                     /gene="LOC121214508"
                     /coded_by="XM_041088274.1:1..447"
                     /db_xref="GeneID:121214508"
ORIGIN      
        1 meiiqfdaaf dirnfssssg mmvrdqdgvi raskstlhsn isspfiaeay acleatklgi
       61 smgielvtim gdskivinkc qsttrdksii gtiiqdirsn ssrlqkivfr fiqrtenvqa
      121 qnlandalkk geemylivpr airvqnpd
//
LOCUS       XP_040944209             884 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 4
            regulatory subunit 3 [Gossypium hirsutum].
ACCESSION   XP_040944209
VERSION     XP_040944209.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088275.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 2% of CDS bases
            frameshifts :: corrected 9 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..884
                     /product="LOW QUALITY PROTEIN: serine/threonine-protein
                     phosphatase 4 regulatory subunit 3"
                     /calculated_mol_wt=99338
     Region          173..362
                     /region_name="PP4R3"
                     /note="Phosphatase 4 regulatory subunit 3; pfam04802"
                     /db_xref="CDD:461435"
     CDS             1..884
                     /gene="LOC107908499"
                     /coded_by="XM_041088275.1:1..2655"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 9 bases in 9 codons"
                     /db_xref="GeneID:107908499"
ORIGIN      
        1 mefpplcfmi spgtadqhhf qslmsirlne dgkwddqgxg hvlvdylers eelalyvfde
       61 edtxtllvhr icpddiyrkq edtiiswrdy eyttelalsf qextgcsyiw dhivmcnrni
      121 hfsslnsetf hsmnselrel pavelstlpi ilktvtesgi adqmrlteli lsdqdffqkl
      181 melfxncedl enmdglhmif kivkgiilln saqifekifg eglimdiigs leydpdvpqv
      241 qhyrnflkeh vvfkeavpik npvviskihq ayrvgylkdv vlarvldeat vaslnsmihs
      301 nnaivisllk ddstfiqelf trlrspttsa eskknlvyfl rexcslsksl qmvqqlqlfr
      361 dlinegifdi isdalqsqdk klvltgtdil ilfxnqdptl lrshvvrqeg ipllgllvkg
      421 mitdfgedmh cqfxeilrsl ldsfsltgaq rdtiidxfyd khlgqlidvi ilscpsdevg
      481 qstsnlassa grvesqnntk peillnicel lcfcvvhhpy rikcnfllnn vidkillltr
      541 rrekylvvaa vrfvrtilsr rdehlvnhfv kknllkpvid afvangnryn vlnsavlelf
      601 eyirkenvkl lvryivdsfw nqlvkfeyla svqslkvkye qclencgtka nvnvldsrkr
      661 ideralekee edyfnedsed dtssesrtrk vqsqpvssdg vaasypslsp rsgglvdyed
      721 deddedykpp pkkhtetsed degtletlrl krklisrehe nevaykkqrl gkapkxrdsv
      781 faalcstlsq avlpskkttn amplssqsae gtkalgegnh temesssprs sgksgseeds
      841 hrekepprnc sdclhspsdn rqlsgddcpl vppksspemt vngs
//
LOCUS       XP_016690480             604 aa            linear   PLN 06-AUG-2024
DEFINITION  DELLA protein RGL1 [Gossypium hirsutum].
ACCESSION   XP_016690480
VERSION     XP_016690480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834991.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..604
                     /product="DELLA protein RGL1"
                     /calculated_mol_wt=67253
     Region          249..602
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..604
                     /gene="LOC107907654"
                     /coded_by="XM_016834991.1:1..1815"
                     /db_xref="GeneID:107907654"
ORIGIN      
        1 mgndvfsfvd lnvygapdkl sssnnefesf dggnkgkagg fygvedwget ggndslpsdy
       61 gfygdapmea sgfsffkqdh hqqqqqqqeq qsfieyglhn gvsfnaqspl iqacfdeiae
      121 lgginngvye digeakkgkq ypglsslgll nnygngfkrl ngerktdddi tvsdtqdedr
      181 klsteevmrv agemflkscg qtidgisgid hpfslsfsgf ldretrdiel aalllaaaek
      241 vgyqqyesas rllkqcdyms sktgnpvqrv vyyfsealre kieretgrss skslkwkplc
      301 nfdtdmialn ptvlachgaf pfgqvsqfag iqaivenvae ankvhiidla ikngiqwtil
      361 iqalaprqhe yrlellkita vateakdlid gtgkrlssfa qslgvpfafk vvmvsdmldl
      421 kedffeldae etivayaafa frsmlatpnr ienimkvlrv mnpclmvvte veanhnspif
      481 vnrfievlfy fsayfdciat cmeqdsknre iiesvffgdg irnmvaaegt drkvrnvkfd
      541 vwraffvryg meeaelsmss kyqadlilkt facgtcctld mngkcllvgw kgtpmhsisv
      601 wkfl
//
LOCUS       XP_040944211             232 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944211
VERSION     XP_040944211.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088277.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..232
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26408
     Region          1..>81
                     /region_name="PLN02380"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /db_xref="CDD:178006"
     Region          <190..221
                     /region_name="Ribosomal_L44"
                     /note="Ribosomal protein L44; cl00706"
                     /db_xref="CDD:469884"
     CDS             1..232
                     /gene="LOC107956628"
                     /coded_by="XM_041088277.1:1..699"
                     /db_xref="GeneID:107956628"
ORIGIN      
        1 maiaaatviv plsilffisg lfvnliqavc fvlirplskk tyrkinrvva ellwlqlvwl
       61 vdwwagvkip affspkisrr fhilkssqid spsrfhiffq pnrfafiffq pkrlrnssgk
      121 ggnlflpsss filsdvslpl iaevnlklif alssifsyvf alffirtqkf hhfhrfelpa
      181 pppapllpak ttkkivlrlq cqgckhvsqh pikrckhfei ggdkktkgts lf
//
LOCUS       XP_016690816             217 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690816
VERSION     XP_016690816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835327.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24635
     Region          9..213
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(69..74,89..90,152,154..155,210..211)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(69..74,89,154)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            90
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
     CDS             1..217
                     /gene="LOC107908053"
                     /coded_by="XM_016835327.1:1..654"
                     /db_xref="GeneID:107908053"
ORIGIN      
        1 mkwlvialia skalvnrfqe vlrfcineaq safvperits dnivaayeil hsiknrrfgk
       61 egsfslkldm skaydciewr liekmllkmg fsvnwveqim wfitsvtysv vvngrvgdkf
      121 ppsqdlrlae ssgaikgarm mrgplrvthf ffsddslifg datamralnv lkvlqsyakc
      181 sgqlvnfeks rvffslnvdm rnqldveril gvhhadn
//
LOCUS       XP_016690810             237 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690810
VERSION     XP_016690810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835321.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26631
     Region          <69..>132
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(69,71,73,98..100)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            69..71
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            69
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(98..101,105..108)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..237
                     /gene="LOC107908047"
                     /coded_by="XM_016835321.1:1..714"
                     /db_xref="GeneID:107908047"
ORIGIN      
        1 mrpkkkvrfd gsvrveapia ltgitlcghc grrhpdecwr mtraclrcgs ikhhvrecll
       61 radqvqatdt gsthsyvacs isknlgipve stssevivls plgqsirvrk lyrdiflevq
      121 gmvfladlme lpfgrvryak klvrkgyeay layvsvsafg dftikdirtm rdfpdvflee
      181 llslplnrev efgiellpgt tlvsispyrm apkeftelka qiqelsdcrf icpsvsp
//
LOCUS       XP_040944212             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944212
VERSION     XP_040944212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088278.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..397
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44669
     Region          111..280
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(147..152,205,236)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            206
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
     CDS             1..397
                     /gene="LOC121214509"
                     /coded_by="XM_041088278.1:1..1194"
                     /db_xref="GeneID:121214509"
ORIGIN      
        1 manwlevedk nstffhrfat yrrrinsisr lekieggean eeseihevas tyfqelfttk
       61 gdgdcsylls gikeniltdt nkelmstfta ddlyaalkgi rptkaprhdd ivlipkipnp
      121 tsivnfrpis lcskrtrkkg ymaveidmsk aydrvkwgyl kevmlrmsft sewvrlvvnc
      181 vsttsyavni ngsgrifspf rglrqgdpls pflflicseg lsslmgmasa vgmlkddcil
      241 fgeasdrgar vlkdilkeyg kssgqcvnfn kskiffstnt aeekkeeasa klglgnnvly
      301 twkstwdtkg vlaeglcwrv gkgmnilisr dywipvlprd rlpvlttnln dskvaelids
      361 snrtwkheli aytlsedvae milciplaer phedsqv
//
LOCUS       XP_040944213             127 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_040944213
VERSION     XP_040944213.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088279.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..127
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=14651
     Region          16..107
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..127
                     /gene="LOC107910510"
                     /coded_by="XM_041088279.1:1..384"
                     /db_xref="GeneID:107910510"
ORIGIN      
        1 mstsavevsg dkvkamwdkr lteifcdici keilkgnrpd thftkdgwlk imtnleketg
       61 krfsqrqlkn rwdalkkewk awkklkgedt glgwnpikrt vdasddwlcl klknfelqal
      121 ipnlkgs
//
LOCUS       XP_040944214             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944214
VERSION     XP_040944214.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088280.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..127
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15080
     Region          <1..76
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..127
                     /gene="LOC121214510"
                     /coded_by="XM_041088280.1:1..384"
                     /db_xref="GeneID:121214510"
ORIGIN      
        1 mglraaierk ikilevhrds alviyqirgd wevrdlklvk yrdlvvelik efyevtfnyf
       61 lreenqlada latlasmfka nreteimpiq msiyetpahc csieeeldgr pwfydileyi
      121 knqrype
//
LOCUS       XP_016690809             602 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690809
VERSION     XP_016690809.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835320.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690809.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..602
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68132
     Region          <233..>313
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..602
                     /gene="LOC107908045"
                     /coded_by="XM_016835320.2:1..1809"
                     /db_xref="GeneID:107908045"
ORIGIN      
        1 mfvsnsganp sdpivpdldd paeiarlkvd dnnaqdkfri leerikavkg aevfsalsak
       61 elslvpdlil ppkfkapdfe kydgtrcpka hlimfcrkmt gyvnddkllv hcfqdslvgs
      121 alrwynqlsr eriqswkdla safceqyrhv sdmvkppltk teimvlfint lkapfydklv
      181 gsatkdfadi visgelient iksgrmespe sskravpakk keveahmvgt esqctpnpyp
      241 aqsrphyrpp snfyfppqgp yyqtplsfpv yamnnqrpft vfppnttpaq sqpkndqrpa
      301 rpnperpqft pipvsygely pkllekqlis lhymaplkpp ypkwydpnan cmyharnqgh
      361 ttesclafkr rvqglidagv lrfdgvsnvt gnplpnhtgg nvnavtnedn wrakvyvtei
      421 nthlrkvwei miengllcps skilkeestk dqsfcdfhgv qghdiqsyre frkllqdmmd
      481 nkevkvfdrv egaeegeica sdnqsmafpy svdrplviyy eakkeevnre vkpsliievp
      541 ahfpykdnka vpwkydvniv vpegekskvm nedvsgvghf trsgmcyspe tiepkkkvag
      601 ps
//
LOCUS       XP_016690808             248 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690808
VERSION     XP_016690808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835319.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..248
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28051
     Region          <200..225
                     /region_name="zf-CCHC_4"
                     /note="Zinc knuckle; pfam14392"
                     /db_xref="CDD:433930"
     CDS             1..248
                     /gene="LOC107908044"
                     /coded_by="XM_016835319.1:1..747"
                     /db_xref="GeneID:107908044"
ORIGIN      
        1 mvvdlspkvg vswkdkllrg kadgpslnfg iineedlvfv egdilrstvn giptinfsdq
       61 ikdwlvkdme tnivvkllgr nmsygvlhnr isnswrpfqp tefpihgdpf nhftlwmskt
      121 viiwlgsktr mimiwcwlkv mgflykrqvl eeigsliskv arldikidsg irgrfarmvv
      181 fvdleksfvl qiivngkvqr vefeslpavc fscgcyghik dfcpsivldp nsiggkskpl
      241 frssrsll
//
LOCUS       XP_040944215             243 aa            linear   PLN 06-AUG-2024
DEFINITION  ATPase 10, plasma membrane-type [Gossypium hirsutum].
ACCESSION   XP_040944215
VERSION     XP_040944215.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088281.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="ATPase 10, plasma membrane-type"
                     /calculated_mol_wt=26846
     Region          1..>184
                     /region_name="ATPase-IIIA_H"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     TIGR01647"
                     /db_xref="CDD:273731"
     CDS             1..243
                     /gene="LOC121214511"
                     /coded_by="XM_041088281.1:1..732"
                     /db_xref="GeneID:121214511"
ORIGIN      
        1 marlapktkv lrdgqwqetd aailvpgdii siklrdiipa darllegdpl kidqiyhvki
       61 pvlsvtlaig shrlsqqgai tkrmtaieem agmdvlcsdk tgtltlnrlt vdrnlvevfs
      121 knmdkdlvvl laarasrlen qdaidaaiin mladpkeara nikevhflpf npvdkrtait
      181 yidsdgnckg lflcprifri vidddfvvil ncnqnpreei skgssglhwe dctlrlayan
      241 lcg
//
LOCUS       XP_016690804             277 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690804
VERSION     XP_016690804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835315.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..277
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31413
     Region          58..144
                     /region_name="zf-RVT"
                     /note="zinc-binding in reverse transcriptase; pfam13966"
                     /db_xref="CDD:433612"
     CDS             1..277
                     /gene="LOC107908041"
                     /coded_by="XM_016835315.1:1..834"
                     /db_xref="GeneID:107908041"
ORIGIN      
        1 manikvgdmi dqfgnwdwsr fapmlqpdii lrivavqpsa vslgydmllw gdsksgrytl
       61 keayntlsrd kweandhhmw srlwktklpr rvrqfvciti kgslltnser cqrrmandmt
      121 cpfcgcsqet slhvlrdclf aqsiysqmav psqlqslffi ldliiwllhn ivdngdtdgi
      181 rcfsemvtvs lkdafgneky ihlekhinlv qatglprgvk wipqpsgwik vnndeevkad
      241 ggyrnvevem dcikalklva gnsvdqalsl fvegpar
//
LOCUS       XP_040944216             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944216
VERSION     XP_040944216.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088282.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15683
     Region          1..>48
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..144
                     /gene="LOC121214512"
                     /coded_by="XM_041088282.1:542..976"
                     /db_xref="GeneID:121214512"
ORIGIN      
        1 mgnfvfkpfs eavetikvat pnggimelpp pitamcitkk fpdmaiyhtl lttsqqkaat
       61 tskqkaprrl allttypstt tisylllrlh iecvklvisp dklaetmaqe aqtealiece
      121 ddseceddsk cgngvpnsdq wcvs
//
LOCUS       XP_016693769             777 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            LECRK2 [Gossypium hirsutum].
ACCESSION   XP_016693769
VERSION     XP_016693769.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838280.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693769.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..777
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase LECRK2"
                     /calculated_mol_wt=87600
     Site            order(28,65,75..76,110,118,120,122,124..146)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,94,96,98,100,102,124,126,128,130,132)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          73..156
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          147..279
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin; smart00108"
                     /db_xref="CDD:214519"
     Region          <248..308
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          495..757
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(495..498,501,503,516,518,547,563..566,613,617..618,
                     620,630..631)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..777
                     /gene="LOC107910444"
                     /coded_by="XM_016838280.2:1..2334"
                     /db_xref="GeneID:107910444"
ORIGIN      
        1 mallfslfll ittciifttq aqttvsnisl vsslsptgds hwlsesgqfa fgfypygngf
       61 aigiwfqniq prtvvwtanr detpfsshat llfntegrlv vqenqgreis iignasfass
      121 asmldtgnfv lfnssseiiw qsfdyptdti lpgqrlspgh rlvsdvsean htsgkfqivm
      181 qpdgnlvqyp vgavkhntay wsagtftagd nvtmnldnng hlyllnatgf iiknftetvs
      241 vscdpihras idadgifrvy shssnqsgnw sirwsstenk cdpyglcgvn syctlmdrnp
      301 ickclpgfdf idpdwtdsgc rrnysedaci rkdqnfevqd mnslsweedp yatfesiskd
      361 dcreecrrdc ncevaiyknl kqvchklklp lrfgrrgtgg rvttfvkivt gfqtinegrv
      421 kksklrmdff itgiasltva flvlalsgvi iyrhriqqyk risdqrdarf vedvtlksft
      481 yeelksatnn frdsigrgay gtvfrgiisn grrivaikrl ervvddgerd frnemkaigk
      541 thhrnlvqll gycydgtnrl lvyeymkngs ladflfksnl kinwegrlai ilniargify
      601 lheechiqii hcdikpenil mddkghakia dfglaklllp nqsktfteir gtrgyvapew
      661 hrnmpitaka dvysfgvilf eiiccrrrte tnvpdneaml vdwvydcfka nevsklvped
      721 evdkkklgrv vkvglwctqd epssrpsmkk vilmlegtvn iadppcptsi vssqsle
//
LOCUS       XP_016693765             406 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 29 [Gossypium hirsutum].
ACCESSION   XP_016693765
VERSION     XP_016693765.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838276.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693765.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="U-box domain-containing protein 29"
                     /calculated_mol_wt=44816
     Region          11..63
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(12,15,17..20,39,43,52)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     CDS             1..406
                     /gene="LOC107910440"
                     /coded_by="XM_016838276.2:1..1221"
                     /db_xref="GeneID:107910440"
ORIGIN      
        1 mvkkelyitv psvfrcpisl dvmkspvslc tgvtydrssi qkwlesghdt cpttmqvlps
       61 kdfipnltlh rlinlwiqss tlrpgsnspr lllatppais evqakllmek verercddsl
      121 skvaefvscc eenrkfvarf dgfveviagv lkrkcveika letavrildl ilsengvteg
      181 lnklilksnq eskflsaivl ilqhgslnsk iksvrvldsl aldseskrri sdsqdlisil
      241 lqllktnnng slndavtsil ttisitrsir srliengive ilsnslteks lkllarlstc
      301 segrsaisse pkcaaaivek llkvskrgte davtvlwstc clnkeekvke avvkgngvtk
      361 ilvimqrege gnvkmmcrdl vkalravckd wclgsyetkt thirpc
//
LOCUS       XP_016690800             192 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690800
VERSION     XP_016690800.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835311.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690800.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..192
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22407
     Region          106..149
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     CDS             1..192
                     /gene="LOC107908032"
                     /coded_by="XM_016835311.2:1..579"
                     /db_xref="GeneID:107908032"
ORIGIN      
        1 mdikyfvgdy vflkvsprkk vlrlgrkgkl ssrfvgpyri lkrvgsvtyq felppkldhi
       61 hdvfhvsmlr ryrsdpshii fveeikvrpn ltfkekpiqi ldqnvkvfrr ksilfvkvlw
      121 rnhgteeatw epedsirqqy shllesgsks lagvfaselv kwflsprdem awhsplrndd
      181 lvedcptkvt vg
//
LOCUS       XP_016690799             128 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L30-like [Gossypium hirsutum].
ACCESSION   XP_016690799
VERSION     XP_016690799.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835310.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690799.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="60S ribosomal protein L30-like"
                     /calculated_mol_wt=14292
     Region          15..108
                     /region_name="PTZ00106"
                     /note="60S ribosomal protein L30; Provisional"
                     /db_xref="CDD:185450"
     CDS             1..128
                     /gene="LOC107908031"
                     /coded_by="XM_016835310.2:1..387"
                     /db_xref="GeneID:107908031"
ORIGIN      
        1 mlihfyvvdd gilmqkkthe sinnrlalvm ksgkytlgyk tilkslrssk gkliiiannc
       61 pplrksviey yamlckvgvh hyngnnvdlg iacgkyfrvc clsiidpgky kgiddnmfnl
      121 hishaanm
//
LOCUS       XP_016690798             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690798
VERSION     XP_016690798.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835309.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690798.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14216
     CDS             1..128
                     /gene="LOC107908030"
                     /coded_by="XM_016835309.2:1..387"
                     /db_xref="GeneID:107908030"
ORIGIN      
        1 msgdkidaky apssvfmeei nwdtlllevd lpdlgdildn epkqieeiek vlmgddnfnh
       61 rvetqfvpdd dfladllvds ppcsggnvvg vdggdlhkqs qthininkdd piakkqkrql
      121 rnkdaamr
//
LOCUS       XP_016690797             420 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016690797
VERSION     XP_016690797.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835308.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690797.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..420
                     /product="receptor-like protein 7"
                     /calculated_mol_wt=46653
     Region          3..>403
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          76..100
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          101..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          304..327
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          328..351
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          352..375
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          376..399
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..420
                     /gene="LOC107908029"
                     /coded_by="XM_016835308.2:1..1263"
                     /db_xref="GeneID:107908029"
ORIGIN      
        1 madpsnrlss wkgqnccswy gincsdsfhv taidlrnpkl dnlildmnsq lvstsdvpst
       61 altgtippsl fslthlryld lsfnnfsfsk vplgfskltg ltylnlsnvm fngsittqfs
      121 nltllmeldl scsssiddys siyttlsstp tihegstyty mkrgnlyapn lswlqrlnnl
      181 rklklsgvdl skasrsnlwa ksvstlsklk llelsncris gevpveqlln ltklselymd
      241 ynflaskips klanltslsv ldltrsylqg hipylpqvkt lhvgnnvdvm vdlhsmfsvp
      301 wprlesidis sthvigsips sianitslvd fiaynsliqg ripasmmnls rlemlrldmn
      361 nisgeispsi snlkslqvls llqnsfhgli pdticsissl wclsrqlfhr khsklhrpaq
//
LOCUS       XP_016690796             172 aa            linear   PLN 06-AUG-2024
DEFINITION  tropomyosin-like [Gossypium hirsutum].
ACCESSION   XP_016690796
VERSION     XP_016690796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835307.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..172
                     /product="tropomyosin-like"
                     /calculated_mol_wt=20413
     CDS             1..172
                     /gene="LOC107908028"
                     /coded_by="XM_016835307.1:1..519"
                     /db_xref="GeneID:107908028"
ORIGIN      
        1 msnawkqthr ikrftvgami tpeyhgwrsk rindnipkls regsqlieeh lrvvpselei
       61 lkqvferrna elekqieqie eekmnlrlda dvqkleaerl rkgkaraeed ldslktdykk
      121 lrlsmrtagl gktseqwrke iqeeknkade werrfqeiqa qnetlkrsls en
//
LOCUS       XP_040944217             750 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase 2 [Gossypium hirsutum].
ACCESSION   XP_040944217
VERSION     XP_040944217.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088283.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..750
                     /product="wall-associated receptor kinase 2"
                     /calculated_mol_wt=83523
     Region          34..92
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          291..325
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(291,294,309)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          426..693
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(426..430,434,446,448,477,493..496,500,502,545,547,
                     549..550,552,563,566,583..586)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(426..430,434,446,448,477,493..496,500,545,547,
                     549..550,552,563)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(430,500,502,545,547,549,566,583..586)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(562..569,579..586)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..750
                     /gene="LOC107952474"
                     /coded_by="XM_041088283.1:1..2253"
                     /db_xref="GeneID:107952474"
ORIGIN      
        1 mgsirslvlm qlmvllnvil tvkastpava kpgcrrrcgd viipypfgtg gdcnitagff
       61 incntsfiph kpflrngnie vinvstdgql rilsntsydc yntsyrnwff ysfrlskfli
      121 nnnknkftai gcdtyavvkq agsygqryat gclslcnnit dvsngscsgi gccqtsipkd
      181 vrsynislrs yanhtnvlpe nhcsyafvae vdsytfsasd lrgfefqsrq fpitldwnig
      241 ntscneanmd vnnfackeys kcvdsennsg ylckclegye gnpylpngcq dinecesmsp
      301 cngtarctnl pgtyncscpv gyegdgkksg tgcslpnkdq sktsplival gvaigflgll
      361 lgivlwcwml rqrqisklre anfqqnggil lreqlskrqg yredvkvfta eelekatnny
      421 nesrilgqgg lgtvykgila dnqivaikks iigdpsqveq fineimvlyk inhrnvvkll
      481 gccletqvpl lvyeyittrt lfhhlhndda tsylswetrl riatetaeal sylhsaasip
      541 iihrdiklan illddnyttk vfdfgasrli psdqaqitti vqgtfgyldp eymlssllte
      601 ksdvysfgvv lmelltgqkv vcfkrpeenr vlpmyftslm kedrlldild pqvlndenve
      661 qfmevatlar rcvrvkgeer ptmkevshel aglqamakhp wsksnlvsee seyllgkfps
      721 tyddgvtsss igmgydsinn kitfelegar
//
LOCUS       XP_040944218             374 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944218
VERSION     XP_040944218.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088284.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..374
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43565
     Region          <162..357
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..374
                     /gene="LOC121214515"
                     /coded_by="XM_041088284.1:1..1125"
                     /db_xref="GeneID:121214515"
ORIGIN      
        1 mesefldkve dnannfrelk eiwaqwddev kqlfysnygd lpylldikvd ehlfralaqf
       61 wnpayscftf geidlvptie eytallrcpr fqadkvyska vnvptfvkkl vnilgmseqw
      121 vsarvkqkge nkcipwrslr ylilahpdtk kkvdvfalsi yglmifpral gyideavtdl
      181 fdrldkrvtp vpailaetfr slsacrsage grfigctqll lvwfhnhfwk vdkvsyrvfs
      241 knysplkela amprrdnitv erwiailqnl kdedvewkap wmvpdeilyr cgncdwvpll
      301 giwgavgyap lmvlkqygsr qfvpatqgla qcefsykddg ykkkiremtn awrqthrmkr
      361 ftvgamttpe yhgw
//
LOCUS       XP_016743329             422 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase 5-like [Gossypium hirsutum].
ACCESSION   XP_016743329
VERSION     XP_016743329.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016887840.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016743329.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..422
                     /product="wall-associated receptor kinase 5-like"
                     /calculated_mol_wt=47682
     Region          99..365
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(99..103,107,119,121,150,166..169,173,175,218,220,
                     222..223,225,236,239,256..259)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(99..103,107,119,121,150,166..169,173,218,220,
                     222..223,225,236)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(103,173,175,218,220,222,239,256..259)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(235..242,252..259)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..422
                     /gene="LOC107952655"
                     /coded_by="XM_016887840.2:1..1269"
                     /db_xref="GeneID:107952655"
ORIGIN      
        1 mgeeesfgkq tlgelevhai gnsrvgigfl glllgiillc wmlrqrqisk lreahfqqng
       61 gillreqlsk rqgyredvkv ftaeeldkat knynesrilg qggqgtvykg iladnqivai
      121 kksiigdpsq veqfineimv lyqinhrnvv kllgccletq vpllvyeyit nrtffhhlhn
      181 ddatsyllwe trlriateta ealsylhsap sipiihrgik lanillddny takvsdfgas
      241 rlipfdqaqi ttivqgtfgy ldpeymlssl ltekndvysf gvvlmelltg qkvvcfkrpk
      301 nrvlpmyfts lmkedrlldi ldprvlnden veqlmevatl arrcvrvkge erptmkevah
      361 elaglqamak hpwsksnlvs eeseyllgkf pstyddgvts swigmgydsi nnkitfelkg
      421 ar
//
LOCUS       XP_040944219             526 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase-like 1 [Gossypium hirsutum].
ACCESSION   XP_040944219
VERSION     XP_040944219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088285.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="wall-associated receptor kinase-like 1"
                     /calculated_mol_wt=58964
     Region          43..77
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(43,46,61)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          183..448
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(183..185,189,201,203,232,248..251,255,257,300,302,
                     304..305,307,318,321,338..341)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(183..185,189,201,203,232,248..251,255,300,302,
                     304..305,307,318)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(185,255,257,300,302,304,321,338..341)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(317..324,334..341)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..526
                     /gene="LOC121214516"
                     /coded_by="XM_041088285.1:1..1581"
                     /db_xref="GeneID:121214516"
ORIGIN      
        1 mdvnnfacke yskcvdsenn sgylckcleg yvgnpylpng cqdinecesm spcngtarct
       61 nlpgtykcsc pvgyegdgkk sgtgcslpnk dpssktsltv valgiclaag fllflagvww
      121 lyrklekrrn ikrkqehfkr ngglllekkl sskeggveni kfftskelqt atdhynenri
      181 lrrggqgvvy kgmlhdgriv avkkskivdq ehldpfinei vilakidhrn vvkllgccle
      241 tevpllvyef ipngtlsqli hdqneeyprs wdirlriaae vsnaisylhs sasvpiyhrd
      301 mkssnillde kfrakvsdfg tsrsigidqt hlttqvqgtf gyldpeyfqs sqfteksdvy
      361 sfgvvlvell taqkpvltsg sqekkslvsy fissvdqnqf ldtldpqvlk dgqkeelvev
      421 aylakrclnl dgkdrptmke vamelerirv lrgffptqlk qaevvvtkpt eigyftsssn
      481 gfykdsiits vsdvhpltil yfiyikqtch lpvititlpl fsssfr
//
LOCUS       XP_016690786             116 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690786
VERSION     XP_016690786.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835297.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..116
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13680
     CDS             1..116
                     /gene="LOC107908013"
                     /coded_by="XM_016835297.1:1..351"
                     /db_xref="GeneID:107908013"
ORIGIN      
        1 mvqldeldew rpktyekprt freitrqfyn vqikrtsqfk vgdkvlldns dprmlpaklr
       61 srelnsfvvq nvfpygtiea thpeyntikv nghrlklyfg gnldnkrvel riqdlp
//
LOCUS       XP_016690788             727 aa            linear   PLN 06-AUG-2024
DEFINITION  putative wall-associated receptor kinase-like 16 [Gossypium
            hirsutum].
ACCESSION   XP_016690788
VERSION     XP_016690788.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835299.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690788.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..727
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /calculated_mol_wt=81339
     Region          278..312
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(278,281,296)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          411..677
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(411..415,419,431,433,462,478..481,485,487,529,531,
                     533..534,536,547,550,567..570)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(411..415,419,431,433,462,478..481,485,529,531,
                     533..534,536,547)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(415,485,487,529,531,533,550,567..570)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(546..553,563..570)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..727
                     /gene="LOC107908016"
                     /coded_by="XM_016835299.2:1..2184"
                     /db_xref="GeneID:107908016"
ORIGIN      
        1 mavtfipvtr aqvfakngcp thcgdltipy pfgtmegcyl nknfyikcte tadsfkayla
       61 ytdfivtdit megqlqiltt vardcysapr lpvmtirqii slspfsiynv sntrnkftai
      121 gcdtyaylyg fvgnksyrag cmslcnrfed lvdgscsgfg ccqiqipdgl ktidvvaysf
      181 nrhvnvsdfn pcsyafivee srfrfssgyv qyisedykfp vsldwvvsne tcveaaknps
      241 nyachrsech epdtgsgylc kcpdgfygnp ylpegcldid eckiwspchk naicsnlpgs
      301 fksickggye gdgkrngtgc spvdapdgfp fvhiglgvsm sllvfvlsis wiywglwqrk
      361 lirqrenffl qnggiilqqe fsklkgsvsa kiftseelkk atnnfhetri lgkgshgtvy
      421 kgilqdnrvv aikksmivdh sqveqfinev ivlsqvnhrn vvkllgccle tevpllvyef
      481 isngtlhqsl hcsgkgylsw ecrlrivaet tgalsylhsa ayppiihrdv kstnilldeh
      541 ytakvsdfga srlvpldqtq lttlvqgtlg yldpeyfqss qlteksdvys fgvllaellt
      601 krkalcfqmp eeernlamhf vsalkkdqlf riidhqvlve gnttqikdva mlankclrvr
      661 geerpsmkev ameleglrsn pkhpwvkdes keteyllsep lganaqgndg ipsdydserq
      721 qiilqgr
//
LOCUS       XP_016690789             294 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690789
VERSION     XP_016690789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835300.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..294
                     /product="uncharacterized protein"
                     /calculated_mol_wt=33777
     Region          <215..270
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..294
                     /gene="LOC107908018"
                     /coded_by="XM_016835300.1:1..885"
                     /db_xref="GeneID:107908018"
ORIGIN      
        1 mlgefnglqa lilndcqyay yvhcfthrlq lalvavarev vevhkffkdl sdivnialas
       61 skrhnelqka qvaeitrvvs inelatrtrm nqigtlqhpc etrwgsdlss vtsllkmyna
      121 tstvfenmna qyivgrsrnk kedvivehyy rvdiffatid tqlqelksrf neivvklltl
      181 tkaldpkefl klfdidkici lvnkslvesg ksvmyplvdr lihliltlpv stasservfs
      241 amkivktrlr skmeddflrs slvvysekei aekfdineii ddfsevkdrr vqfk
//
LOCUS       XP_016690790             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690790
VERSION     XP_016690790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835301.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18366
     CDS             1..158
                     /gene="LOC107908020"
                     /coded_by="XM_016835301.1:1..477"
                     /db_xref="GeneID:107908020"
ORIGIN      
        1 mapyealygc mcrtplcwte lgecrvlgpk lifkiednvk virdrlkgkl sprfirsfqi
       61 vkrvglityq leippeldyi hdvflvsmlr ryqsnpsyiv sveeievrld ltfekepiqi
      121 ldrdvkvlmr ksislvkvlw qnhgteeatw epegsill
//
LOCUS       XP_016690791              74 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690791
VERSION     XP_016690791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835302.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..74
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7876
     Region          2..73
                     /region_name="Keratin_assoc"
                     /note="Keratinocyte-associated protein 2; pfam09775"
                     /db_xref="CDD:401649"
     CDS             1..74
                     /gene="LOC107908021"
                     /coded_by="XM_016835302.2:91..315"
                     /db_xref="GeneID:107908021"
ORIGIN      
        1 mmyrgklass elftilggfi ssflflvslt fignfqeafg mrtgwgagsf lfsagllcev
       61 nkisgvilsk sepk
//
LOCUS       XP_016690792             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690792
VERSION     XP_016690792.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835303.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21724
     Region          164..>193
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     CDS             1..193
                     /gene="LOC107908022"
                     /coded_by="XM_016835303.1:1..582"
                     /db_xref="GeneID:107908022"
ORIGIN      
        1 mqernqaqqp plltapsevp pvappplpvi esskrtpiek lrkcgsekfr gemitvesen
       61 lkeivriisa fsaqklmrkg navflayiid twdseskleh lsvvngfvdv flekllglpp
      121 drevefvidv isgttslsit pyrmtpvelk elktqlqell dkafirtsms hwgapvlfvk
      181 kkygslrlci dyr
//
LOCUS       XP_040944220             184 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944220
VERSION     XP_040944220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088286.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21468
     Region          <1..33
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          <79..148
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..184
                     /gene="LOC107907986"
                     /coded_by="XM_041088286.1:1..555"
                     /db_xref="GeneID:107907986"
ORIGIN      
        1 marwqillsk fdimyesqka vkgnaiadfl tsraledyep lnfdfpnedf myvaateenp
       61 qmdrvwklnf ngasnavtie hkikvlkvyg dsalviyqlr gewetrdtkl isyrkmvlel
      121 mdefdditfy ylprdenqma dvlatlasmi qvnkledmkp iqmsifetpa hcynieeeek
      181 ddhp
//
LOCUS       XP_040944222             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944222
VERSION     XP_040944222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088288.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19451
     CDS             1..171
                     /gene="LOC121214518"
                     /coded_by="XM_041088288.1:1..516"
                     /db_xref="GeneID:121214518"
ORIGIN      
        1 mvdratdsds gstkndvals dspeltdlpn ggafqrihaw refkygenke saedakseae
       61 vgvlstdsvt klgelemqnk gqkvevemvh pwpewielme rllqqnyfdh krrddekmve
      121 dlgfdmtnvv eevkddagid fkdyktvqta cinvivetgy snfgwfwmpe c
//
LOCUS       XP_040944223             216 aa            linear   PLN 06-AUG-2024
DEFINITION  homer protein homolog 2-like [Gossypium hirsutum].
ACCESSION   XP_040944223
VERSION     XP_040944223.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088289.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="homer protein homolog 2-like"
                     /calculated_mol_wt=25773
     Region          61..>156
                     /region_name="PRK05771"
                     /note="V-type ATP synthase subunit I; Validated"
                     /db_xref="CDD:235600"
     CDS             1..216
                     /gene="LOC121214519"
                     /coded_by="XM_041088289.1:1..651"
                     /db_xref="GeneID:121214519"
ORIGIN      
        1 meakkmnlrl didvqklene klkkekskae eeldslktdy kkmrlsmrta glrktseqwq
       61 veireekdkp drweqkfqem qkrnevleks lsesqkekge lkdrvvmleg clrqyrnqnl
      121 ekelkaslik ieemkkriee letelqscei qikhlkanes hnneqlhhfq sqvrsrdhli
      181 eevmvqirev tdhiqtlavq vdtlsvkyel esdrgq
//
LOCUS       XP_040944224             375 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880-like [Gossypium hirsutum].
ACCESSION   XP_040944224
VERSION     XP_040944224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088290.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..375
                     /product="uncharacterized protein At2g29880-like"
                     /calculated_mol_wt=42266
     Region          76..175
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..375
                     /gene="LOC121214520"
                     /coded_by="XM_041088290.1:1..1128"
                     /db_xref="GeneID:121214520"
ORIGIN      
        1 mnyvnltgnv nqvafyfgar fsfgkneryw tvtyrfardi nrwqaeslva fqeiimsgvs
       61 esnvpsqssr gskrkwvpee daalvscmvd lhnvgtfnad tgfkagylne lekmlekalp
      121 namlkarpni esrirllkrd wsivydmlng qnnsgfgwdd hrqvvvaeda vwdsylkshk
      181 eagqfrhrsf pyydqltaiy akdratgkda qtaadafeei naedvpsayi nedrneyydc
      241 danvslddmd vsatepqtdk nqggsssskr kkknsdatsh fsssvtdaat llaenmraig
      301 eqisrsiasd vvvhqgiqek aanlyptlce iegltvderf qaltkipdhp tqmvvffslp
      361 sdvrlewvrr flanh
//
LOCUS       XP_040944225             187 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944225
VERSION     XP_040944225.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088291.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..187
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21199
     Region          8..>181
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..187
                     /gene="LOC121203333"
                     /coded_by="XM_041088291.1:1..564"
                     /db_xref="GeneID:121203333"
ORIGIN      
        1 mskkasncai cdnsnrasic avcvnyrlne ynsllkslkn hrdllyskln eliaakgkad
       61 dqlnwrvrqs ekltnlkekl rrskeqlaqg kvkiervshe lkvkygvlks argtleknrv
      121 eklekfypnl ictqslghvh ldeerrdgss gqydlicnar lprgldphsv pseelaaslg
      181 ycfclff
//
LOCUS       XP_016690818             339 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690818
VERSION     XP_016690818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835329.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..339
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39136
     Region          68..150
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..339
                     /gene="LOC107908056"
                     /coded_by="XM_016835329.1:1..1020"
                     /db_xref="GeneID:107908056"
ORIGIN      
        1 mkallgslev weiiekgyik veaeeeeelt qvqkeslrks rkknqqalfw iyqgvqsyev
       61 awekiacast akqaweflpn sfkgdekstk kkrngetmdd irgvekilrs ldsrfdyivv
      121 aieesknlsi mtideltssl qaheerlnkq kkevdldqal qsklslnekn rdfkkqrgrd
      181 rgrgrgrnfr gsgsnarerg kgastengwk vanqsqnfrg sqrgrgrenq rgrgrgyfec
      241 yhcrkpghlw ckqaydnknl flnffesdcg evkvgdgkay kvrsvgelef ktkqgrvekm
      301 fevyfvpglq nnllsvghll kkgydihfrd macylsrkn
//
LOCUS       XP_040944227             570 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944227
VERSION     XP_040944227.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088293.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..570
                     /product="uncharacterized protein"
                     /calculated_mol_wt=64652
     Region          234..310
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(234,236,262..264,303)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            order(262..265,269..272)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          496..>570
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(499..502,531..532,535,559)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..570
                     /gene="LOC121214521"
                     /coded_by="XM_041088293.1:1..1713"
                     /db_xref="GeneID:121214521"
ORIGIN      
        1 mdnkemefyk evkeeqsict sestkvprva qpvviisrpk nnevrtpvms miiikkpvtf
       61 fyqdskrvpw nyecnttvpg ketakdqgvs adpepvkgna isveqkrkva epvlsinepv
      121 keeeameflk flkhseyngv eqlhkqpaht svlvlllnsk vhcsalmkvl netyvandif
      181 vnkldrlvnn isadnfiffn ddeippggig stkalhittr ykrytllgvl nnngsalnvl
      241 plstlnklli dsshmktfqn ivrafdgter kvmgrieipl ligltvyevd flvmdikpsy
      301 ncllgrpwih sagavpsslh qklklvsegr lvtinveedi iaavsneapy vktndevvec
      361 sfrslefvng tfiserskil vpkisktinm glqlllgkga lprrvlgkyl qgkirvlevk
      421 dkqdnfglry kpdreqrrke lerrqerrra rlnrekikwe pmiiphisnt fvfggiihfe
      481 rristeesie etlenvhina icegngigai lvspngdyhp ftskldfdct nnmaeyeaci
      541 mgiraaierk ikilevygdl alviyqlkre
//
LOCUS       XP_040944228             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944228
VERSION     XP_040944228.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088294.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..162
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19092
     CDS             1..162
                     /gene="LOC121214523"
                     /coded_by="XM_041088294.1:1..489"
                     /db_xref="GeneID:121214523"
ORIGIN      
        1 mwmdftlekl aklyiseivr lhglpdliil drdpcftsrf wralhealgt rlhfstafhl
       61 htnelkgrki vgqklvrete dkvqtiqdnl rvafdrqksy adlkrkeikf avgdklflkf
      121 spwrkvlrfg hkgklsprry hsdpshifpf eqievspdls ye
//
LOCUS       XP_016690782             284 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690782
VERSION     XP_016690782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835293.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..284
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32771
     Region          <92..142
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..284
                     /gene="LOC107908007"
                     /coded_by="XM_016835293.1:1..855"
                     /db_xref="GeneID:107908007"
ORIGIN      
        1 mvhrvctdkp gystsftppi llpvpvipqs mqpiqvskls idkirkygae afqataeddp
       61 egvefwlent irvfnelsci svecvkcarf ldqkrkefle lkqgymtvse yerefvklsk
      121 yarkciptkt tickrfkegl neyikllvei lelkefvvlv dwahkveelr kekrradfea
      181 rdlrkrltgm syqsvpkksk eyhnhsttsm gyssrdrgtr hsspkpqats iasvgcvrda
      241 rpeckhcnrp yygecrvkrg arfrcgslnh cikdclkkse kqka
//
LOCUS       XP_016690780             561 aa            linear   PLN 06-AUG-2024
DEFINITION  increased DNA methylation 1 [Gossypium hirsutum].
ACCESSION   XP_016690780
VERSION     XP_016690780.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835291.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..561
                     /product="increased DNA methylation 1"
                     /calculated_mol_wt=61750
     Region          191..243
                     /region_name="TDBD"
                     /note="Tify domain binding domain; pfam16135"
                     /db_xref="CDD:465033"
     Region          268..306
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(268,278..281,285,303)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          320..357
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          <449..558
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
     CDS             1..561
                     /gene="LOC107908005"
                     /coded_by="XM_016835291.2:1..1686"
                     /db_xref="GeneID:107908005"
ORIGIN      
        1 madavfnwyk nggtaepgtk rsettlqakk hlssmgwvfw yaqkngrqel ryqspqgkvy
       61 ytlkaackgy idetsgaegg ggmavavava adlepkkplk rksvtqenpa fpkslpfksl
      121 qppkrgkkvr kqenqakvik rasiriredp vpnsshrnpr tvlswlidnn avsilakvyy
      181 rnkagnplmr gritrtgiqc dccfrvfalt afeahagstn hrpaaniild dgsgrslsdc
      241 qrqvhdsmmt iptsakkddl nphgsddvcs accdggelic cdrcpsafhv ncvglkevpd
      301 gdwfcpsccc giccigtvsd ddnflacqqc eckfhigclk lkesnelagk nnwfcshsce
      361 nifsglrnlt gkpilvgnnl twtllkskas sngdgldsca enhrklnial dvmhecfeps
      421 kdsytgrdlv eavifsqgsn lkrlnfkgfy iavleenddl vsvatirvhg divaemslva
      481 trfshrrrgm cralvdelek nlaklgvqkl ilpavpaavd twvngfgfsh mtgderskll
      541 qytlldfqgs imcqkplkte l
//
LOCUS       XP_016690862             299 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690862
VERSION     XP_016690862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835373.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..299
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34476
     Region          <193..298
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            order(209..214,243..244,271,273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     Site            order(209..214,243,273)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238825"
     Site            244
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     CDS             1..299
                     /gene="LOC107908107"
                     /coded_by="XM_016835373.1:1..900"
                     /db_xref="GeneID:107908107"
ORIGIN      
        1 mehfvrecsk nenatpvtsq rsvpalrgrr ssrggsfsrg gtrkgnnvvt hqseaialsd
       61 tlldyktvqi gdqvnpkfdp eiertfrerr hertaqrqve mnlvnqnqdq arvktqanln
      121 gryvqgcitk ydlerlverv helnqgeqee ptepdieelt dgteteansf tnteekgsdk
      181 epnisklrvk pkeelvklsf eleyttsmpt sasyyqlkvk dsdvskmafq tryshyeflv
      241 mpfglmnalv afmdlmnhif hpylnqfvvv fiddiltyln pkseheqhir ivlqvlrek
//
LOCUS       XP_016690861             122 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00860-like [Gossypium
            hirsutum].
ACCESSION   XP_016690861
VERSION     XP_016690861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835372.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..122
                     /product="uncharacterized mitochondrial protein
                     AtMg00860-like"
                     /calculated_mol_wt=13742
     Region          <2..38
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          78..>115
                     /region_name="RT_RNaseH"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17917"
                     /db_xref="CDD:465565"
     CDS             1..122
                     /gene="LOC107908106"
                     /coded_by="XM_016835372.1:1..369"
                     /db_xref="GeneID:107908106"
ORIGIN      
        1 mvfiddilvy sttknehdeh lrivlqilre kqlyakfsnh ggsaegirvd pqkievvldw
       61 kqpknvsdir nflgllelgk eftvysdpsy vglgcvliqd gkvvayashq lktheastvy
      121 rp
//
LOCUS       XP_040944229             330 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944229
VERSION     XP_040944229.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088295.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..330
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37905
     Region          <30..103
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Region          <176..228
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..330
                     /gene="LOC121214524"
                     /coded_by="XM_041088295.1:1..993"
                     /db_xref="GeneID:121214524"
ORIGIN      
        1 mveqeekqil pheetietvi leegklvkig atyqramvtl fhdmmhkele vyvddmiaks
       61 kmeeehvqvl kklfmrlrkf qlklnpakct fgvrsgkllg fvvsergiei dpdkavkrsa
      121 ianflasral gdyeplnfdf lnadlmyvgt tekdfqeggp wnlnfdgasn aigngigalk
      181 gewetrdskl vyyrklvmel ieefdsvtfs ylprdenqma dalatlasmf kvnkledmkp
      241 iqisiyeapa hcciidnege kddhpwyhdi lryvksreyp nhatendkkt lrrlaidyvl
      301 dgeilykkgk dqklqvlpqf edidlpldll
//
LOCUS       XP_016690860             717 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690860
VERSION     XP_016690860.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835371.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690860.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..717
                     /product="uncharacterized protein"
                     /calculated_mol_wt=81260
     Region          463..544
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(466,468,470,496..498,537)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            466..468
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            466
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(496..499,503..506)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..717
                     /gene="LOC107908105"
                     /coded_by="XM_016835371.2:1..2154"
                     /db_xref="GeneID:107908105"
ORIGIN      
        1 msgemienai rcgkieages tkrlaprkke heinntstln kdhsksitvg qaravianqq
       61 sfskqesnpr pnveklqftp ipvtyrelyq nlfdahvvsp fylkpmqply pkwydanvqy
      121 kyhtgtkghs ienctafkkl verlinlgiv kigdssgpnv adnplpnhdn kgvnaiieng
      181 grrvkanvae iktplewdwk qmvkrglikq nsierpegar kfcefhveeg hdiqkctefr
      241 tmvqnlmdnk elefyveikg leegevyaae egsagkaqka nhpvvpwnyd ynvtiprees
      301 lvndsgedeg fytrsgkryd panarvesgk gkalavelgn aktdkieprv nqpvteneak
      361 eflkflkhse ysmveqlhkq parisvlell lssevhrnpl ikelnetyva sdisvnkldh
      421 lvnnisadnf iffnddeipl egrgstkalh isarcggyml pgvlidngia lnvlplstln
      481 rlpvdsshmk scqnivrafd gterkvtgri eiplligpnt yevdflvmdi kpsyncllgr
      541 pwihsagaie apvvkdkrdh fclgfkpnak qrredlekrq errkarlnrk kidweplafp
      601 hifrtfvsgg trysglrtpr kktteeilgn lninaifeek seegstsgiy piesgsvlnn
      661 wtveempevf ralsksqdin dmsdstmdle npferdmcle esqdfednmi atylrty
//
LOCUS       XP_016690859             275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690859
VERSION     XP_016690859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835370.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..275
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30881
     Region          68..160
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(83,85,87,111..113,160)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            83..85
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            83
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(111..114,118..121)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..275
                     /gene="LOC107908104"
                     /coded_by="XM_016835370.1:1..828"
                     /db_xref="GeneID:107908104"
ORIGIN      
        1 mvlmhsyqdk egsgiwvrya nkdkgiqell skkkklsdme ttaltkgcst iltnqlppkm
       61 kdprsftilc pignnylgka lcdlgasinv mplstfkklr ighmkpttvt lqlvdrslaq
      121 pegnikdilv rvdkfifsck siqcndkeec hivnvlddli aeefndqsti lseefavtsd
      181 defvdncdsm veanniklkh rwqiesldla nriapifkss ideaptlelk llptnlkyvf
      241 lsnkntlpvi vsttldvtqe dklvhifkqh nraia
//
LOCUS       XP_040944230             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944230
VERSION     XP_040944230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088296.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..189
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22411
     Region          <2..84
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     CDS             1..189
                     /gene="LOC121214525"
                     /coded_by="XM_041088296.1:1..570"
                     /db_xref="GeneID:121214525"
ORIGIN      
        1 maeyeacimg iraaierkik ilevygdstf viyqlkgewe trdlkliryr rlvlelieef
       61 dnitfcylpr eenqmtdala tlasmikvnk legmeriqms iyetlthcys ieeeendnhp
      121 wyqdilqyvk nhecpdqaie ndkrtlrrla ieyildgeil ykrrkkqvvl rcvdaveake
      181 ileevheaq
//
LOCUS       XP_016690856             226 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-13A [Gossypium hirsutum].
ACCESSION   XP_016690856
VERSION     XP_016690856.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835367.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690856.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..226
                     /product="kinesin-like protein KIN-13A"
                     /calculated_mol_wt=25292
     Region          80..>226
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     CDS             1..226
                     /gene="LOC107908097"
                     /coded_by="XM_016835367.2:1..681"
                     /db_xref="GeneID:107908097"
ORIGIN      
        1 mqqsnaaama fydhaggggs fnnagpaggd agidqrlipn llmqvnvlli akeqssadas
       61 assfianeke istrennvak ikvvvrkrpl nkkeiyqkkd nivtvdenvl tvhepklkvd
      121 ltayvekhef cfdavldehv tndevyrvtv epiipiifqr tkatcfaygq tgsgktftmq
      181 plplraaqdl irflhqpvyh sqrfklwlsy feiydgklfd llsdrk
//
LOCUS       XP_016690855             243 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690855
VERSION     XP_016690855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835366.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28260
     CDS             1..243
                     /gene="LOC107908095"
                     /coded_by="XM_016835366.1:1..732"
                     /db_xref="GeneID:107908095"
ORIGIN      
        1 mefvselpsi pskrdsvwvi vdqltksahf ilvrtnyslq klakiyisri irlhgvpvli
       61 isdrdphfts qfwkklheal lgerwvwdpe lvsetedkvr liqdrlkagf drqksygdlk
      121 rrdikyfvgd fvflkvslwk kvlrfshkrk lsprfigsyq ilkcvgpvay qlelpleldr
      181 ihdmfyvsml kryrsdlshv vsikeienel agssgkgvnv levlrsnscv gwvlifaqlt
      241 drv
//
LOCUS       XP_016690749             395 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog [Gossypium
            hirsutum].
ACCESSION   XP_016690749
VERSION     XP_016690749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835260.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..395
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /calculated_mol_wt=44593
     Region          48..385
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..395
                     /gene="LOC107907970"
                     /coded_by="XM_016835260.1:1..1188"
                     /db_xref="GeneID:107907970"
ORIGIN      
        1 marlirtdir hisdaannad sfrvlrgrvs alkiapdarf mpylelagfg svamirssdl
       61 rfdllsalve rwrpethtfh fscgectvtl edvavqlglp idrspvtgvs sftdlaavcy
      121 qllgespedg dkyfsgikft wlkgkicgls atvsegelmc varayimhmi gavlmpdvng
      181 dsvhlsylpl ladfsiarly swgsavlatl yrelfrateq qvkdiggcli llqswalyrm
      241 pwttrpgigk ssdvpiyrlr ieqharegfi wmpywrpkia nvvpssalvd shiwctntpi
      301 infnvvewyh gdrvlrqfgc iqpipdlpcq lgddhgltkr grvqldweiy hrkyvalwnd
      361 qlrripqmvm atdqqpssey aqwyhscgkp yllga
//
LOCUS       XP_016690748             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690748
VERSION     XP_016690748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835259.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..183
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21372
     CDS             1..183
                     /gene="LOC107907969"
                     /coded_by="XM_016835259.1:1..552"
                     /db_xref="GeneID:107907969"
ORIGIN      
        1 metghvfved vkdaivancq kvrsmnvevy srcnetfrvt etiscrpgis trsyevdlrn
       61 krcncwrfqt lhyscadvma acakfllnvk qfidevytle htlhvwknef pilpdfltwe
      121 vsptnfelvp dkglrknlkg ypqssrihne idirekfdgk mcgvcrltgy nrskclyrny
      181 hie
//
LOCUS       XP_040944231             169 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944231
VERSION     XP_040944231.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088297.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..169
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18668
     CDS             1..169
                     /gene="LOC121214526"
                     /coded_by="XM_041088297.1:1..510"
                     /db_xref="GeneID:121214526"
ORIGIN      
        1 msrkrtrlsk ttpenpivid eervhelnqg eqeeptepei eestnktete vdsvieteee
       61 esdkelnspq pakgagnpep rvepeeepvk lsvepkfttp mptpvqsrvv glfdgikdsg
      121 ananmdvias egmrgewaee kgerepkdeg fegfgfneee gqgedngqd
//
LOCUS       XP_016690757             232 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690757
VERSION     XP_016690757.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835268.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..232
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26616
     Region          <1..76
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..232
                     /gene="LOC107907979"
                     /coded_by="XM_016835268.1:1..699"
                     /db_xref="GeneID:107907979"
ORIGIN      
        1 mgirvaierk ikvlkvygds alviyqlkge wetrdhklis ykklvlelid efdditfcyl
       61 prdenqmant latlasmiqv nklkdmkpiq msiyeisidc ysieeaekdd hpwyqsilqy
      121 vknreypdqa tendkrtlrr laieyvldge ilykrgkdqv lircvdaves rkileevheg
      181 icgthangft martstgatl fslvygmeav lpieveipsf qvlaklnlde ak
//
LOCUS       XP_016690758             162 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690758
VERSION     XP_016690758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835269.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..162
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19266
     Region          <136..161
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     CDS             1..162
                     /gene="LOC107907980"
                     /coded_by="XM_016835269.1:1..489"
                     /db_xref="GeneID:107907980"
ORIGIN      
        1 mdrltksahl ipvhtdyspq klakllirdr lkaapdrkks ytdlkrreie ysegdfvflk
       61 rvgptayqle lpseldrihd vfhvsmlrry rfdpthiipi eeikvrpdlt feeelvqile
      121 gdvkvlrrkf ipllkvlwcn hsseettwep edtmrqqyph lf
//
LOCUS       XP_016690761             271 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690761
VERSION     XP_016690761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835272.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..271
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31167
     CDS             1..271
                     /gene="LOC107907982"
                     /coded_by="XM_016835272.1:1..816"
                     /db_xref="GeneID:107907982"
ORIGIN      
        1 mdsfefdnvk aekedalcry nmerklmigf rligfllvlf lllwlcfpti vesaghfrrr
       61 fvsafnkplf tfiivniiil avyalsnqkr thkqstrnni ydeyvssyrs ipatsavlta
      121 nvsdfpvtev stvdkrivlv enavaaspvk qratiidtit eskisvstvk qpktklcste
      181 vkqkhyersr smvsecrqre sfrefrrset avssremvms gieparksme emsseefqli
      241 idsfiaerrk tlmqenighy srrkesivgm k
//
LOCUS       XP_040944232             155 aa            linear   PLN 06-AUG-2024
DEFINITION  MOB kinase activator 3B [Gossypium hirsutum].
ACCESSION   XP_040944232
VERSION     XP_040944232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088298.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="MOB kinase activator 3B"
                     /calculated_mol_wt=17957
     Region          <17..>79
                     /region_name="Mob1_phocein"
                     /note="Mob1/phocein family; pfam03637"
                     /db_xref="CDD:461000"
     CDS             1..155
                     /gene="LOC107910715"
                     /coded_by="XM_041088298.1:1..468"
                     /db_xref="GeneID:107910715"
ORIGIN      
        1 mmigsvsehl lvyfawyeyr waddvqikkp ievsapkyve ylmdwiesql dyesifpqkl
       61 gapfppnfke vvktifkklp elslknlsvy ilysksavym shsascdnkh rsgrsrywfl
      121 tilahqlsds gflevevsht ikapfcfctc kayec
//
LOCUS       XP_016690853             249 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690853
VERSION     XP_016690853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835364.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..249
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28434
     Region          119..243
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(124,125,157..159,162,186,226,240)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..249
                     /gene="LOC107908094"
                     /coded_by="XM_016835364.1:1..750"
                     /db_xref="GeneID:107908094"
ORIGIN      
        1 menlginais eegmveetls girpyepesv lnnwtakeis tltekcdlif rllskhnlgv
       61 wdegcqeafd knamkgsvia dfitsraled ykplnfdfpn edlmcvetie edsqkdhiwk
      121 lnfdvalnav girigavlvs sngdhypftr kldfdytknm aeyeacimgi raaverkikv
      181 levyedsalv iyqlkgewet rdpilicyre lvlelikefd ditfcyrprh knqmanalat
      241 lasmikvnk
//
LOCUS       XP_016690852             278 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690852
VERSION     XP_016690852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835363.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..278
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30904
     Region          59..182
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     CDS             1..278
                     /gene="LOC107908092"
                     /coded_by="XM_016835363.1:1..837"
                     /db_xref="GeneID:107908092"
ORIGIN      
        1 mdhhirdnpl kadtvskqfv cgaqstqqda rfgiveksrs ikgtlkknyi kptsrvsvra
       61 nmikanedad lpevitgkis flgheihpli gpgsthsyic tkvmegrsle vvpskinvlv
      121 tvigrvmrdc llifgkhnfl tdllllslhe fedilgldwl trhstivdsq argvclltte
      181 gkevflpivy tsladniisv vssrnfivkg tdtylayimg steaskdink vsimkdfsdv
      241 fpeellgmpp drevefsiev algtapylvp riewchwc
//
LOCUS       XP_040944233             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944233
VERSION     XP_040944233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088299.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18265
     CDS             1..158
                     /gene="LOC107908091"
                     /coded_by="XM_041088299.1:1..477"
                     /db_xref="GeneID:107908091"
ORIGIN      
        1 mgraarlglt arlknervrf lkylllslkl nvfnfvslps stnlpkslty rallpffpip
       61 kyrsssspqi llqstdpppp ihlrsstqfk ksltmdplmi pfhflsacfw lirknkrrwg
      121 skhllkihgi rqrrakksqh plctwgtycy gppfcrln
//
LOCUS       XP_016690849             216 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690849
VERSION     XP_016690849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835360.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24499
     Region          23..149
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(54,56,58,83..85,124)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            54..56
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            54
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(83..86,90..93)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..216
                     /gene="LOC107908089"
                     /coded_by="XM_016835360.1:1..651"
                     /db_xref="GeneID:107908089"
ORIGIN      
        1 mgrgqrapgr ganqiearqp aliytvrhre drdtanvtad tlfihtapyf slidigsths
       61 yiasstfvnl gmfvestsre itkispldqs vrvnrlyrnv lleiqrvvfs anlmelsfre
      121 fdlilgmdwl mehrasldca tkrvilrsen vvemimideh rdslsnvifa fmtekklprl
      181 psnreaefsi gvlqgttlvs iapyhmtpke lrelka
//
LOCUS       XP_040944234             545 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 16 [Gossypium hirsutum].
ACCESSION   XP_040944234
VERSION     XP_040944234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088300.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..545
                     /product="O-fucosyltransferase 16"
                     /calculated_mol_wt=62274
     Region          80..400
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(88..91,245,247,319..321,363,382..384)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..545
                     /gene="LOC107910691"
                     /coded_by="XM_041088300.1:1..1638"
                     /db_xref="GeneID:107910691"
ORIGIN      
        1 mthwigsirf typlsvalyp lerfdwdgfd hmcnvrlaig rnsspfsify assyscslrl
       61 lirlhqvliv aeaithptry laiatsggln qqrtgitdav vaarilnatl vvpkldqksf
      121 wkdasdftdi fdvdwfisfl skdvkiikql pkrggrtwtp ytmrvprkcs ercylnrvlp
      181 vllkrhavql nkfdyrlanr ldtgfqklrc rvnyhalqfa npilemgkil vqrlrmrskh
      241 yialhlrfep dmlafsgcdy gggekeknel gaiqkrwktl hknnpdkerr qgrcpltpee
      301 vglmlkalgy gsdvhiyvas gevyggeetl rplkalfpnf yskdtiatke elgpflsfss
      361 rraaldfivc desdvfvtnn ngnmarilag rrkyfghkpt irpnakklyr lflsrnnmtw
      421 eefssrirtl qkgfmgepke vrpgrgefhe npstciceds eamgkvkads rhkkhgkldd
      481 ssrkdvmvsd dqndyddndv pewpdldede edesgskekh lsnvtgsdyg avisdepele
      541 amlsd
//
LOCUS       XP_040944235             207 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944235
VERSION     XP_040944235.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088301.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 46% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..207
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23298
     CDS             1..207
                     /gene="LOC107951291"
                     /coded_by="XM_041088301.1:1..624"
                     /db_xref="GeneID:107951291"
ORIGIN      
        1 meesregvrt regidkeqeg rkfeesqivk syrvveerpi afkkgkkrqr mqgggqsalv
       61 lheeiesegh nkittavgry nasrdllerr ngcclestlq cvenvfhltg alisdwsllf
      121 hlvkdlfrfl lhpainkear nlpnlstktk sdspketmae pyveqveyld vltkigkkig
      181 kkiggskprh vpsflsisgl svfdlst
//
LOCUS       XP_016690777             353 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690777
VERSION     XP_016690777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835288.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..353
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39943
     Region          90..186
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(105,107,109,133..135,180)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            105..107
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            105
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(133..136,140..143)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..353
                     /gene="LOC107908002"
                     /coded_by="XM_016835288.1:1..1062"
                     /db_xref="GeneID:107908002"
ORIGIN      
        1 mpplfpegll kdkkeneeke iletfrkvev niplidaikk ipryvkflke lctskrrlig
       61 nervnvgenv savlqkkvpp kckdqgmfvi sceignvgik kamcdlgasi nvmpypiykl
      121 inagplkktg viiqledrsv iypkrlledv lvkvnelvfp vdfyiinmed dnstnsfdil
      181 lgrpflstas akinvqsgtl tmefdgeivk fnihkamghp nslsniysid iidcltqsyp
      241 eyhdfnelet ilyksididv lshleelsii gdplrefvkh lktqpsltnr gnqfeilpsq
      301 tkilpsilqp stlelealpd hikyiflgkk dtlpvivsnm kqremvkdvl ihp
//
LOCUS       XP_016690778             123 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690778
VERSION     XP_016690778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835289.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..123
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14284
     CDS             1..123
                     /gene="LOC107908003"
                     /coded_by="XM_016835289.1:1..372"
                     /db_xref="GeneID:107908003"
ORIGIN      
        1 mapyealygr ncrtpscwte lgerrvlgpe lvfdtedkvr liqdqlkaas drqksycrsd
       61 pthvvstvei evrpdlnfke epvqildrnv kilrnksitl vkvlwrnhss eeamwepeea
      121 mrq
//
LOCUS       XP_040944237             171 aa            linear   PLN 06-AUG-2024
DEFINITION  putative threonine aspartase [Gossypium hirsutum].
ACCESSION   XP_040944237
VERSION     XP_040944237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088303.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="putative threonine aspartase"
                     /calculated_mol_wt=18201
     Region          <56..>163
                     /region_name="Ntn_Asparaginase_2_like"
                     /note="L-Asparaginase type 2-like enzymes of the
                     NTN-hydrolase superfamily; cl00635"
                     /db_xref="CDD:445022"
     Site            order(110..112,123,145,148,154..155)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271334"
     CDS             1..171
                     /gene="LOC107949250"
                     /coded_by="XM_041088303.1:1..516"
                     /db_xref="GeneID:107949250"
ORIGIN      
        1 mekelvdlsl deeededsle tlimqcvtsv nysvcvngem gecfkpmrrl rqgshaqtcd
       61 tlednsggqs cmlspsqdni mdtvgviwvd tegniasgas sggialkvsg rvglaamyga
      121 scwasskgpf gapfivgccv sgageylmke faareccvss slifwkwhek a
//
LOCUS       XP_016690867             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690867
VERSION     XP_016690867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835378.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16970
     CDS             1..152
                     /gene="LOC107908113"
                     /coded_by="XM_016835378.1:1..459"
                     /db_xref="GeneID:107908113"
ORIGIN      
        1 mamsifiklg igkarpttvt lqlvdrsyah leeceadhgl piilgrsfla igntlidvqk
       61 geltmrvndq qvtfnvfnal kcvdeneech tidliqaamd elvkfcydns dseddlmeqg
      121 dtvsfeelge fmeaqqimdr lgkkfessnl sk
//
LOCUS       XP_016690827             187 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690827
VERSION     XP_016690827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835338.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..187
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21992
     CDS             1..187
                     /gene="LOC107908064"
                     /coded_by="XM_016835338.1:1..564"
                     /db_xref="GeneID:107908064"
ORIGIN      
        1 mlrscvidfg gnwdnylpla kfvynnsyqk iiqmepfeal hgwrcktplc wsnmekkrnl
       61 gpelvreved kerlvcewlk aasdrqksya dlrlrvseci hnvfhvsmlr kyisdlshvv
      121 lveeinvrsd lsydkepvai ldrkvkvlhn ktvllvkvlw cnhkeatwes edvmqrqypy
      181 lfdsgks
//
LOCUS       XP_040944238             453 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944238
VERSION     XP_040944238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088304.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..453
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51524
     CDS             1..453
                     /gene="LOC121214531"
                     /coded_by="XM_041088304.1:1..1362"
                     /db_xref="GeneID:121214531"
ORIGIN      
        1 maqlghnaai ppmqqhnvnn pllpqdariq nrtirdfvip ildnlqrevv rptiqagnfe
       61 lkpvmfqmln snrqyvglph edvkehlksf llicslpsdt knpslrgkkh ckaitlrsgk
      121 qtgepfitst vapqdtdgvi tdekveskef fnasdkevpq vvthmptvrp wklsmqskvl
      181 aqadislplp faqrfrkneh dkqyqqlldt lkqlhinipl vdalvqimsy gkfmkdllsk
      241 kkkltdikti altegcsavl inklpfklkd pwsftipcsi dkeipiilgr pffstvqtli
      301 daykgelimr lndklatfnv fksvqckdke echtidmldd lieeelndqn ivlskefavt
      361 sdadflddcd smvkannlkl khgwqiesln lankttqifk efikeapile lkplphhlky
      421 vflgehntlp viipatldvp qeeklvhilk qhk
//
LOCUS       XP_016694022             220 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L18, partial [Gossypium hirsutum].
ACCESSION   XP_016694022
VERSION     XP_016694022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838533.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..220
                     /product="50S ribosomal protein L18"
     Region          111..213
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(112,114..115,117,122,126..131,133,135,142..144,147,
                     189,200)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            order(112,115..116)
                     /site_type="other"
                     /note="L27 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     Site            order(113..114,190,193,209)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            195
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..220
                     /gene="LOC107910624"
                     /coded_by="XM_016838533.2:<1..663"
                     /db_xref="GeneID:107910624"
ORIGIN      
        1 fqtrafcsrk nlatsvafsf pllpiyssia ffslficlvt fllsfhlplp lplglqisfv
       61 kdlfqfllhp gslftkkffw venfldddns kpytyqkgkk sknpnkhvsf kqrteaymep
      121 ftldvfiskr fvstsvthrv tckqvavagt nskdikavlr srsdipaclv igrilaerar
      181 etdvytasyt pkerdkfkgk iravvqslid ngidikvyld
//
LOCUS       XP_040944239             306 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944239
VERSION     XP_040944239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088305.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..306
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35220
     Region          11..36
                     /region_name="DUF4219"
                     /note="Domain of unknown function (DUF4219); pfam13961"
                     /db_xref="CDD:433608"
     Region          68..202
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     Region          <249..>290
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..306
                     /gene="LOC121214533"
                     /coded_by="XM_041088305.1:1..921"
                     /db_xref="GeneID:121214533"
ORIGIN      
        1 msfspppppv fagesyniwa vkmktylqah dlwnvvqndt eppplranpt iaqirqyned
       61 cakkykamsc lqsgvldaif trimacdtpk eawdklkeef qgsdktrqqq linlrrdfen
      121 lrmkdsetik qyadrimstv nnirllgddf sdqrvvekvi ttlpekyesk issledsrdl
      181 saipltelin alyaqeqrra nrmgeysega fqarsresss fisnhkgkkp wsekkergkk
      241 eaakkkfppc vhckrtthle kycwyrpdiq crgckqlghi ekvcknkpka qsqnhnqaqv
      301 aediea
//
LOCUS       XP_040944240             227 aa            linear   PLN 06-AUG-2024
DEFINITION  ATPase 6, plasma membrane-type [Gossypium hirsutum].
ACCESSION   XP_040944240
VERSION     XP_040944240.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088306.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="ATPase 6, plasma membrane-type"
                     /calculated_mol_wt=24649
     Region          67..>215
                     /region_name="ATPase-IIIA_H"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     TIGR01647"
                     /db_xref="CDD:273731"
     CDS             1..227
                     /gene="LOC121214534"
                     /coded_by="XM_041088306.1:1..684"
                     /db_xref="GeneID:121214534"
ORIGIN      
        1 mtpanltgqf gdttytntpl ihclvqcivi tdvasgndir fnaldafsdw khevlrsfil
       61 lrtsraglts kdaevrvhif gqnkleekpe nkflkflsfm wnplswvmea aavmaivlan
      121 gggegpdwld fvgiicllii nstisfieen nagnaaaalm arlapktkvl rdgqwqetda
      181 ailvpgdiis iklgdiipad arllegdplk idqasallds dksqlnn
//
LOCUS       XP_016690835             236 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690835
VERSION     XP_016690835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835346.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..236
                     /product="uncharacterized protein"
                     /calculated_mol_wt=28365
     Region          <9..>233
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..236
                     /gene="LOC107908074"
                     /coded_by="XM_016835346.1:1..711"
                     /db_xref="GeneID:107908074"
ORIGIN      
        1 meeekmnlrl didvqklete klrkeknkad eelgslkmdy kklhlsirtv glgktseqwr
       61 aeireekdka dkweqkfqem qrrnealeks lsesqkekfe lkdrmimleg slrqyrnrns
      121 sielkeslsk ieemkqrike letmlqncen rikhleanen rnkeqlhyfq nqvrrryhim
      181 eeavvqirev adhvqalavq vdmlsvkyel esdrgqelav llwkirmlsn raklyl
//
LOCUS       XP_040944241             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944241
VERSION     XP_040944241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088307.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18831
     Region          62..166
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            116
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     CDS             1..166
                     /gene="LOC121214536"
                     /coded_by="XM_041088307.1:1..501"
                     /db_xref="GeneID:121214536"
ORIGIN      
        1 mkstavtlql adrslaqpeg qikdiklede gtqsieqqrr lnekikkvfk keiitwldag
       61 iiylisdsnw aspvqcvpkk vaslwynqia ialkdqektt ftylfgtfaf yrmpfglcnv
      121 patfqrcmia iflamiedsl gvlmddfsvy gndfdhcadn mdkilk
//
LOCUS       XP_016690837             120 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich protein 4 [Gossypium hirsutum].
ACCESSION   XP_016690837
VERSION     XP_016690837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835348.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..120
                     /product="proline-rich protein 4"
                     /calculated_mol_wt=13305
     CDS             1..120
                     /gene="LOC107908076"
                     /coded_by="XM_016835348.1:1..363"
                     /db_xref="GeneID:107908076"
ORIGIN      
        1 mvhkislnmf lslilifvlv vlsdaarprq lgnengimsk ekvalgkeee aksnfremkn
       61 lppfpfpfpd mplvpplqfp pfpfplpppf evpsvpsfpl apltfppipy fsppplplhp
//
LOCUS       XP_016690843             303 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690843
VERSION     XP_016690843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835354.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="uncharacterized protein"
                     /calculated_mol_wt=34454
     Region          <3..92
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..303
                     /gene="LOC107908083"
                     /coded_by="XM_016835354.1:1..912"
                     /db_xref="GeneID:107908083"
ORIGIN      
        1 minlrrdfen lkmkevetvk qyldrimavv nqirllgnqf pdiqvvekli ttlperyesk
       61 issledsmdl stisllelin alyaleqkra srdeghaega fqaknreasc smkkckqldh
      121 vkkvcknkgh tqqqnveaqt ieleelmfta syeaqlaapy elinvvkqkw lidsrctshm
      181 tvntslfknv dkrfhsrvkf endqyieaig nrdvliktls gtklftdvll vpgidqnlls
      241 vgkllkknys vvfkenkcli ldpsgcelis tkmanrsfav nsnlatsaay tnsldetqlw
      301 hkk
//
LOCUS       XP_040944243             243 aa            linear   PLN 06-AUG-2024
DEFINITION  dynamin-related protein 12A-like [Gossypium hirsutum].
ACCESSION   XP_040944243
VERSION     XP_040944243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088309.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="dynamin-related protein 12A-like"
                     /calculated_mol_wt=27324
     Region          <2..>199
                     /region_name="Dynamin_M"
                     /note="Dynamin central region; pfam01031"
                     /db_xref="CDD:460033"
     Region          <187..239
                     /region_name="GED"
                     /note="Dynamin GTPase effector domain; cl02558"
                     /db_xref="CDD:470615"
     CDS             1..243
                     /gene="LOC107904802"
                     /coded_by="XM_041088309.1:1..732"
                     /db_xref="GeneID:107904802"
ORIGIN      
        1 msqhletvik sripgiqsli nktiaelete lsrlgkpiaa dagvsvllgs ctqlwrfavf
       61 fikiseniwm gcmyhvlfvl pslihlslts fnfanfvrdf vltfnvvhwr tggdkvynvf
      121 dnqlpatlkr lqfdrqlsme nirklitead gyqphliape qgyrcliest lvtirgpaea
      181 avdathsilk dlvhkamset pqkrlsalln ddpaimerrs alakrlelyr saqaeidtva
      241 wsk
//
LOCUS       XP_040944244             247 aa            linear   PLN 06-AUG-2024
DEFINITION  putative methyltransferase C9orf114 [Gossypium hirsutum].
ACCESSION   XP_040944244
VERSION     XP_040944244.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088310.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..247
                     /product="putative methyltransferase C9orf114"
                     /calculated_mol_wt=27646
     Region          61..>234
                     /region_name="Methyltrn_RNA_3"
                     /note="Putative RNA methyltransferase; cl46533"
                     /db_xref="CDD:480873"
     CDS             1..247
                     /gene="LOC121214537"
                     /coded_by="XM_041088310.1:1..744"
                     /db_xref="GeneID:121214537"
ORIGIN      
        1 mgkkkdkkrf erevetnspa etqtdltlln aagdshrkkk pktkseketn getkkaddip
       61 tvtvpiagsi vdnaqslewr kiplllftls tlcykfsfnf sfffqlvvvf dnksslrnng
      121 aflnqnnsne ndrgaafivr ilqyletpqy lrkalfvkhn slryvgmlpp ldaphhlrkh
      181 ewapnregvt leekptssag tvvdvgldkn vvvdqalgpg krvtvamgtn qnldygnkig
      241 lwkanws
//
LOCUS       XP_016690842             119 aa            linear   PLN 06-AUG-2024
DEFINITION  geranylgeranyl pyrophosphate synthase, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016690842
VERSION     XP_016690842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="geranylgeranyl pyrophosphate synthase,
                     chloroplastic"
                     /calculated_mol_wt=12965
     Region          <5..119
                     /region_name="IspA"
                     /note="Geranylgeranyl pyrophosphate synthase [Coenzyme
                     transport and metabolism]; COG0142"
                     /db_xref="CDD:439912"
     CDS             1..119
                     /gene="LOC107908081"
                     /coded_by="XM_016835353.1:1..360"
                     /db_xref="GeneID:107908081"
ORIGIN      
        1 mesftaalle aavvlgavlg grcdedverl rkfaryigll fqvvddildv tksskelgkt
       61 agkdlladkv typkligiek skefaeklrs dslellqgfd sekaaplial anyiayrqn
//
LOCUS       XP_016670002             347 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016670002
VERSION     XP_016670002.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016814513.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39481
     Region          15..94
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          <161..257
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(161,163,188..190,229)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            order(188..191,195..198)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..347
                     /gene="LOC107889983"
                     /coded_by="XM_016814513.1:1..1044"
                     /db_xref="GeneID:107889983"
ORIGIN      
        1 mndidctpeq klkgaasllr deayqwwlli eegtqsdcln wdffntafqg ryvrasyvda
       61 rrrgfmnltq gdrsvveyea eflrlnryar gmirrrsskr lstwsariet ergknkkyse
      121 pfnsiqrpkk rvrpdglvre gvlvvstgiq pcsdygrhhl gcthsyvast vsknlgisve
      181 stsseiivls plgkfvrvhr lyrnvllvvq gvvflanlle llfgefdlil gmdwlvehrv
      241 sldcvtkrvv lrtkddkevv visecrdyls nvifalvvek lvrkwceaym avvsvlvsgd
      301 fsvgdirtvr efldvfpeel pglplnrege faielllgta pvciapy
//
LOCUS       XP_016690826             204 aa            linear   PLN 06-AUG-2024
DEFINITION  protein YIP4a [Gossypium hirsutum].
ACCESSION   XP_016690826
VERSION     XP_016690826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835337.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="protein YIP4a"
                     /calculated_mol_wt=22768
     Region          <59..184
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..204
                     /gene="LOC107908063"
                     /coded_by="XM_016835337.2:1..615"
                     /db_xref="GeneID:107908063"
ORIGIN      
        1 mtptelllgk relpknkakw lqpgkeketi rrkdgdrmst igglpprmft splgvgkalr
       61 dwdlwwpfff ivflgltlsw sasvkksevf avafallaag aviltlnvll lgghiiffqs
      121 lsllgyclfp ldvealicmm ennvilkmiv vcvtlawssw aaypfmssav nlsrkalaly
      181 pvflmvydii aasdpfystt vyfw
//
LOCUS       XP_016690844             169 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690844
VERSION     XP_016690844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..169
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19469
     Region          14..39
                     /region_name="DUF4219"
                     /note="Domain of unknown function (DUF4219); pfam13961"
                     /db_xref="CDD:433608"
     Region          70..>169
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..169
                     /gene="LOC107908084"
                     /coded_by="XM_016835355.1:1..510"
                     /db_xref="GeneID:107908084"
ORIGIN      
        1 msssgfspap ppvngegyhi wvvkmktylq afdlwevvna dvelpplran ptvahirqhs
       61 ddrakrykam syiqnsvsdl iftmvmacet pkqawdklke efqgnekirh qqllnlrrdf
      121 enlkmneskt ikqysdrima vvnsikllgd qfnearivek vistlpery
//
LOCUS       XP_016690864             524 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690864
VERSION     XP_016690864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835375.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..524
                     /product="uncharacterized protein"
                     /calculated_mol_wt=59187
     Region          360..442
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(364,366,368,394..396,435)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            364..366
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            364
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(394..397,401..404)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..524
                     /gene="LOC107908110"
                     /coded_by="XM_016835375.1:1..1575"
                     /db_xref="GeneID:107908110"
ORIGIN      
        1 mqppfpkwyd tnaqceyhar itghsienct afkkvverli kmgvvkldds sgqnvarnpl
       61 pdhadkgina iakngdkrik anvmevrtpm kcvweqmvcr gliaqdlder pkeagtycdf
      121 htkeghdiqe caefktvvqn lmdnkeikfy eefkgfeere vcaseerpve rfqkvnhpvv
      181 iisrprsnev giqiplkvii qkpvpfsykd nkkwkalrps nlknrvdkrk asvveqkkek
      241 avqlespvne pvtenearef lkflkhseys vveqlhkqpa risvlallls seahhsalmk
      301 vlnetyvdnd isvnkldrlv gnisadnyif fnddeippgg tgstkalhit tccnrymlsr
      361 vlidngsaln vlplstlnrl pvdnshmkmc qnvvrafngi ergvmgriei plligastye
      421 vdflvmdikp syscllgrpw ihsvravsss lhqklklvid grlvtinaee diiavvtsdt
      481 pyiepeeeal ecsfrslefv natyivegnk ipmpsisktt kmgl
//
LOCUS       XP_016690768             471 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690768
VERSION     XP_016690768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835279.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..471
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53505
     Region          <371..419
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(371..374,378..381)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..471
                     /gene="LOC107907990"
                     /coded_by="XM_016835279.1:1..1416"
                     /db_xref="GeneID:107907990"
ORIGIN      
        1 meklqfttip msyrelyqnl fnahlvspyy lkplqlpypk wydanaqcdy hagivghsie
       61 hcttfkklve rligmgvvkl dvlpniknll pnhndnglnm icrnmgrgik eniaevkipl
      121 rwvwkkmver glfvldskrs fekvenyyef yhekgheiqe caefralvqg mmdnkemefy
      181 eevkeegsic tsesmkaprv aqpvviisrp kndekttkdq gvsadpepvk gravtveqkg
      241 kiakpvlsin kpvkeeeame flkflkhsey nlveqlhkqp arisvlalll nsevhqntlm
      301 kvlnetyvtn disvdkldrl vnninadnfi fvnddeippg gmgstkalhi ttrckglpfd
      361 sshmktcqni vrvfdgierk vmgrieipll igptiyevdf lvmdikpsyn cllgrpyiql
      421 agavpsslhq klklvsagwl vtinaeedii aavsnealyv etndesvecs f
//
LOCUS       XP_040944245             363 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944245
VERSION     XP_040944245.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088311.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..363
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42907
     Region          13..>113
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Region          <253..>363
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..363
                     /gene="LOC121214539"
                     /coded_by="XM_041088311.1:1..1092"
                     /db_xref="GeneID:121214539"
ORIGIN      
        1 mcqpfrrsmn vtgmseqwva awikqkgdsk cipwkslkdl iltypdvrkr ldifylsiyg
       61 lvffpkalgh vdeavtdlfd rldkkvtpip tilaetfrsl sacrkagegr figcaqllla
      121 wfhyhfwkvd rvsyrvfsen ysplkeivat lrrddiseek wmsilqnlqe edvewrapwl
      181 lpdeilyrcg nfdwvtllgi wravgyaslk kiqdmssawk qtrrkrlvvg pmttpeynew
      241 wvrrindnip kisqensqsi eeylrvvpse leiirqdfeg rnaelekkie qmeeekmnlr
      301 ldidvqklet eklrkgknkv eeeldslktv ykklrlsmki tglvktseqw raeireekdk
      361 adr
//
LOCUS       XP_040944246             355 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944246
VERSION     XP_040944246.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088312.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..355
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41912
     Region          1..100
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     CDS             1..355
                     /gene="LOC121214540"
                     /coded_by="XM_041088312.1:1..1068"
                     /db_xref="GeneID:121214540"
ORIGIN      
        1 mlfmkkkdgn lrlcidyrql nkltinnkys lpridnlfeq fwgasvfski dirsgyyqlk
       61 deynehlrvv lqvfrekqly vklsmcefwl ykvvflghvi saegiqvdpk kvevildwkp
      121 srivskvrsf lrlvgyyrhf iegfssttap ltkllqkntt fewtnkrqkc fekmklvlte
      181 apvftqssdg qserviqife dmlrncvihf ggnwdrhlsl akfvynnsyr ksiqitpfep
      241 lygrrcrtpi crsnmkekrn lgtelvrede dkarlkvlkf aqkgklnprf igpyeitewi
      301 gpvvyhllla pklkcihdvf hvsilrkyks dpshvvpiee ievrsdllyk ethti
//
LOCUS       XP_016690823             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690823
VERSION     XP_016690823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835334.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..164
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19020
     CDS             1..164
                     /gene="LOC107908059"
                     /coded_by="XM_016835334.1:1..495"
                     /db_xref="GeneID:107908059"
ORIGIN      
        1 mdklrsriek vvnptckdws srldealway rtafktplgm spfklvygkp chfsvelehk
       61 aywaikklnm dwinagisrl lelnemeefr aeayanakll klfngklksr wsgpfkivhv
      121 yprraievkd gktgfnfkvn gqhlkhywga pilrdkhsit lrta
//
LOCUS       XP_016690821             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690821
VERSION     XP_016690821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835332.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24817
     Region          126..197
                     /region_name="BING4CT"
                     /note="BING4CT (NUC141) domain; cl06957"
                     /db_xref="CDD:471553"
     CDS             1..220
                     /gene="LOC107908058"
                     /coded_by="XM_016835332.1:1..663"
                     /db_xref="GeneID:107908058"
ORIGIN      
        1 mveklglktt khlnpyklqw lnnggeikvn kqvlvpfaig kykdevlcdv vsiysfmhkg
       61 kkfilapltl cqvqedqerl rknteevrgk nkmtvsassk eirkclssqq sllillfkds
      121 cllfetsnvl pasissllqe fqdvfpdetp kglpplrgie hqidfipgat ipnrsayrsn
      181 peetkelqrq ilelldkgyi rkslsqcavl vlfvpkkdgt
//
LOCUS       XP_016690820             326 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690820
VERSION     XP_016690820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835331.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37543
     Region          15..>80
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(27,29,31,56..58)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            27..29
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            27
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Region          <172..260
                     /region_name="RNase_HI_RT_Ty3"
                     /note="Ty3/Gypsy family of RNase HI in long-term repeat
                     retroelements; cd09274"
                     /db_xref="CDD:260006"
     CDS             1..326
                     /gene="LOC107908057"
                     /coded_by="XM_016835331.1:1..981"
                     /db_xref="GeneID:107908057"
ORIGIN      
        1 medeqqreni fhtccqvqgk lcsviidggs ctnvastllv eklskpttkh pspyklqwln
       61 dggelkvtkq dfqdvfsddv psglpplrgi ehqidfvpgv vilnrpayrt npektkelqr
      121 qvnelmqkat feralaltlf qfcwyqrrtg vgtspllalh dfsktfeiec eklngaalny
      181 piydkemyvl iraletwqhy lwpkefvihs dhealkhikg qhklnkrhak wveylesfpy
      241 vikykkgkdn iladalsrry tllsyldskl lgftllkdly akdddfgeif vacenvavdk
      301 fyrcngflfk egklcatkfr mgvvsk
//
LOCUS       XP_016681105             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016681105
VERSION     XP_016681105.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016825616.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46071
     Region          47..146
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          230..316
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(242,244,246,271..273,312)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            242..244
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            242
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(271..274,278..281)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..399
                     /gene="LOC107899873"
                     /coded_by="XM_016825616.1:1..1200"
                     /db_xref="GeneID:107899873"
ORIGIN      
        1 mdddlknikl sipsfqgkfd rkaylewekk ielvfdchny skikkvklav iefsdyamiw
       61 wdqlttsrrr ngerpistwa kikavmrrrf ipsyyhrkly qklqnltqgs rsvedyykkm
      121 eiamiradvq enheatmarf lpglnrdian vvelqhyiei vyivhmaimv ekplkrkgte
      181 eledepetvs nneeavehal dgelivvkrs lsiqsvkdeq qqenifhtcc qvqgklcsvi
      241 idggsctsva stlmveklnl pttkhpnpyk iqwlndgrel kvtkqvlvsf sigkycdevl
      301 cdvapmhagh lllgrplkfd rrvmhdgysn rysfkymern vtlapltpkq ayedqiklkn
      361 sdfqdvfpde vpsglpplcg iehqidfvpg avilnrlaf
//
LOCUS       XP_040944247             538 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944247
VERSION     XP_040944247.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088313.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..538
                     /product="uncharacterized protein"
                     /calculated_mol_wt=62385
     Region          <3..73
                     /region_name="DUF4175"
                     /note="Domain of unknown function (DUF4175); pfam13779"
                     /db_xref="CDD:463981"
     Region          163..262
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          303..319
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     Region          383..472
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(397,399,401,426..428,467)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            397..399
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            397
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(426..429,433..436)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..538
                     /gene="LOC121214541"
                     /coded_by="XM_041088313.1:1..1617"
                     /db_xref="GeneID:121214541"
ORIGIN      
        1 msqdteqnvv grperqpvrn iapggggvpd lgqqallref qqmlrneles ikerldrveg
       61 gptregtpqg lrrergrarp fvddpfepse eesdqaldpn errrgqrnrg prdrgqvddd
      121 lkgiklsipp fhgksdpeay lewerkievi fechnyserk kvklpaiefs nyamvwwdql
      181 ttsrrrnger pisswtemkv vmrkrfipsy yyrelyqklq nltqgnrsve dyfkemeiam
      241 iranvdedre atmarflagl nrdianvvel qhyvevvdmv skpvgetskg kevvmpnrsr
      301 eikcfkclgr ghiasqcpnr tnmilrange ieseedddee pdetveeede leyavdgeil
      361 vikrslslqs veneqqreni fhtrchvqgk vcslivdggs ctnvastlmv eklglpttkh
      421 pqpyklqrln dggelkvtkq vlvpftigky fdkvlcdvvp mhaghmllgr pwqfdrkaih
      481 drftnhytfk fegknvtlvp mtprqvyedq lklresfekf renekesekh tekrkknf
//
LOCUS       XP_016732573             682 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016732573
VERSION     XP_016732573.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877084.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732573.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..682
                     /product="uncharacterized protein"
                     /calculated_mol_wt=78344
     Region          122..214
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          341..430
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(355,357,359,384..386,425)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            355..357
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            355
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(384..387,391..394)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          521..588
                     /region_name="BING4CT"
                     /note="BING4CT (NUC141) domain; cl06957"
                     /db_xref="CDD:471553"
     Region          589..>680
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     CDS             1..682
                     /gene="LOC107943339"
                     /coded_by="XM_016877084.2:1..2049"
                     /db_xref="GeneID:107943339"
ORIGIN      
        1 mtgtedrshg gdqppdlqmq aitrtlqrll enalepihsr ldkiegggsq svhnehnden
       61 dtehsprvnq rpgrtvddni snikvaipsf qgrsdpdayl tweskvehvf ecynyseqkk
      121 vrlaamefvd yalvwwdqll isrrrtgegl vrtwedmkri mwrrfvpshy hrdlfqklqt
      181 lkqgnrsied yfkememsmm ranivedrea tmarkqapqp plrirepges skpkppiadn
      241 grgkqpmvap ersrdiqyfk clgrghvasq cpnrrvmlmr edgeiesdse eevherstke
      301 deendlevae sgqvmeimvv krslnmqqvq deqqretifh trckvqdkvc vviidsgsct
      361 nvassmmvdr lglkttkypn pyklqwlndg gelkvtkqvv vpfsignykd evlcdvvsmd
      421 athlllgcpw qydkramhdg ftnrysfmha gkkitlaplt psqviedqts lkkskevake
      481 kkkmsvyass reirkclssh qslfilmfkd hcllaefpad lpasivsllq efedvfpket
      541 pkglpplrgi ehqidfipga tipnrpayrt npeetkelqr qvaelmdkgy ireslspcav
      601 pvllvpkkdg swrmcvdcra vnqitikyrh piprlddmld elcgavifsk idlksgyhqi
      661 rmregdewkt afktklglye cl
//
LOCUS       XP_016690752             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690752
VERSION     XP_016690752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835263.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..117
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13322
     CDS             1..117
                     /gene="LOC107907972"
                     /coded_by="XM_016835263.1:1..354"
                     /db_xref="GeneID:107907972"
ORIGIN      
        1 mspyqlvfgk achlpveler kamwvikqvn mdyevvgkkr llditelkei rlklhpgklr
       61 srwsglskls kyfllniviv lefvgattdn leedrvrlek vaeeatddag aepkpee
//
LOCUS       XP_016690753             153 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S11, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016690753
VERSION     XP_016690753.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835264.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..153
                     /product="30S ribosomal protein S11, chloroplastic"
                     /calculated_mol_wt=17216
     Region          20..>70
                     /region_name="Ribosomal_S11"
                     /note="Ribosomal protein S11; cl00332"
                     /db_xref="CDD:444843"
     CDS             1..153
                     /gene="LOC107907973"
                     /coded_by="XM_016835264.1:1..462"
                     /db_xref="GeneID:107907973"
ORIGIN      
        1 makpipkvgs rrngrnsaqk sarripkgvi hvqesfnnti vtiadvrgrv iswssvgtcg
       61 fkgtrrgtpy ssnsrprsle clnltfqisy gfqfvegskh pelvplaeed etkclelenl
      121 lplrffrrkl rggrkvtrea werkaktpln fns
//
LOCUS       XP_016690754             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690754
VERSION     XP_016690754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835265.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14026
     CDS             1..128
                     /gene="LOC107907974"
                     /coded_by="XM_016835265.1:1..387"
                     /db_xref="GeneID:107907974"
ORIGIN      
        1 mvegtpvgth ilkmigyies lerlgfligv elaidvilqs lldsfsqfvl nfkkneinkt
       61 flqllnmlqt vesimkkigp kpilivrkdk gkgkakakvk pnkgkvalkp kagiakeekc
      121 fhcgktgh
//
LOCUS       XP_040944248             187 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial Rho GTPase 1-like [Gossypium hirsutum].
ACCESSION   XP_040944248
VERSION     XP_040944248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088314.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..187
                     /product="mitochondrial Rho GTPase 1-like"
                     /calculated_mol_wt=20604
     Region          <13..147
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            22..25
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(24..25,43..44)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            85..88
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            115..117
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..187
                     /gene="LOC107907975"
                     /coded_by="XM_041088314.1:1..564"
                     /db_xref="GeneID:107907975"
ORIGIN      
        1 mgchrrirkt lykgikktlf lleipedevs kllsskesla pcdiavfvyd ssdesswkra
       61 tellidvagh gedtgyevpc livaakddld sfpmaiqnsi rvsqdmgiea lipissklsd
      121 lnnifrrivn aaehphlsip eteagrsrkq yhrlinrslm vvsvgvavai vgfatyrvya
      181 arknass
//
LOCUS       XP_040944249             645 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944249
VERSION     XP_040944249.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088315.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..645
                     /product="uncharacterized protein"
                     /calculated_mol_wt=73179
     Region          24..40
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     Region          104..193
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(118,120,122,147..149,188)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            118..120
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            118
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(147..150,154..157)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          412..>485
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     Region          556..616
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     CDS             1..645
                     /gene="LOC121214545"
                     /coded_by="XM_041088315.1:1..1938"
                     /db_xref="GeneID:121214545"
ORIGIN      
        1 mnkpvgetnk vkevampnrs reikcfkclg rghiasqcpn rsnmivrang eieseeedde
       61 epvktteeed eleyavdgki liikrslslq svqneqqren ifhtrfhvqg kvcslivdgg
      121 sctnvastlm veklgllttk hpqpyklqwl nnggelkvtk qvlvpftirk ysdevlcdvv
      181 pmhaghmllg hpwqfdrkvi hdgftnrytf kydgknvtlv pmtprqvyed qlklresvek
      241 frenefkdvf pedipsglpp irgiehqidf ipgasipnhp ayrtnpketk elqkkvnevm
      301 ekgyiresls pcvvpgakeg rnmgkeslya nikkctfctn kviflgfmvn skglevdqdk
      361 vkvirewprp tsisqvrsfh glesfyhrfv pnfstlaapl tsvikkssas cwneeqeksf
      421 iaiksyltna pllvlpdfak mfevecdasg veigfvltqd gklvayfsek lngvvlnypt
      481 ydkemkgken vvadalscry tllshldakl lgfvllkemy vddaefgaiy ksrenkvvdk
      541 yfrfdgflfh egklcvpqss iqkllvieah ggglmghfvv aktlstlheh ffwpgmrkdv
      601 ervcrqcitc kkakskinph glykplpiss apwvdlfmdf vtaqn
//
LOCUS       XP_040944250            1051 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944250
VERSION     XP_040944250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088316.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1051
                     /product="uncharacterized protein"
                     /calculated_mol_wt=119793
     Region          <1..61
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          102..118
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     Region          182..271
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(196,198,200,225..227,266)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            196..198
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            196
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(225..228,232..235)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          464..>537
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     Region          608..668
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     Region          688..781
                     /region_name="rve"
                     /note="Integrase core domain; pfam00665"
                     /db_xref="CDD:459897"
     CDS             1..1051
                     /gene="LOC121214546"
                     /coded_by="XM_041088316.1:1..3156"
                     /db_xref="GeneID:121214546"
ORIGIN      
        1 mrkrfipsyy hcelyqklqn ltqgnrsvee yykemeiami radmeedrea tmarflagln
       61 rdianvvdlq hydevvdmmn kpvgetskvk evampnrsre ikcfkclgrg hiasqcpnrs
      121 nmivrangei eseeeddeep vktteeedel eyavdgkili ikrslslqsv qneqqrenif
      181 htrfhvqgkv cslivdggsc tnvastlmve klglpttkhp qpyklqwlnn rgelkvtkqv
      241 lvpftigkyf devlcdvvpi haghmllghp wkfdrkvihd gftnrytfky dgknvtlvpm
      301 tprqvyedql klresvekfr enefkdvfpe dipsglppir giehqidfip gasipnhpay
      361 rtnpkktkel qkkvnevmek gyireslssc vvpviflgfm vsseglevdq dkvkavrewp
      421 rptsisqvrs fhgletfyrr fvpnfstlaa pltsvikkss asfwneeqek sfiaiksylt
      481 napllvlpdf akmfevecda sgveigfvlt qdgklvayfs eklngvvlny ptydkemkgk
      541 envvadalsc rytllshlda kllgfvflke myvddaefga iykscenkvv dkyfrfdgfl
      601 fhegklcvpq ssiqkllvie ahggrlmghf gvaktlstlh ehffwpgmrk dvervcsqci
      661 tckkakskin phglykplpi ssapwvdlfm dfvlglprtk tgkdsifivv drfskmshfi
      721 acsktddavh ianlffrevv rlhgiprtiv fdrdtkflsh fwrslcgklg mkllfsttch
      781 pqmdgqtevv nralstllrv iirknleswe eclphvefay nrsihsatkh spfevvygfn
      841 pltpldllpl pndqlghana nqkvdyvkql hqkvraniea rteqymratn kgrkqvvfkp
      901 gdwvwvhmsk erflaqrrsk llprgdgrfq vlerinensy kldlpgdyni sasfnvadls
      961 pfdtgsdlgt nrleeggnda ieahelssan dtslelpkgp itrarakkfk daistlmdrv
     1021 wgesvaglle sswtskmskp ctllqahsaq l
//
LOCUS       XP_016690775             174 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690775
VERSION     XP_016690775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835286.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..174
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19688
     Region          49..126
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(64,66,68,92..94)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            64..66
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            64
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(92..95,99..102)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..174
                     /gene="LOC107908000"
                     /coded_by="XM_016835286.1:1..525"
                     /db_xref="GeneID:107908000"
ORIGIN      
        1 mpyekikkdi lskkrrlgef ktvaltegct tilkkklppk lkdlgsftip clignyyvgk
       61 alcdlgasin lmpmsvfrkl gigkarpttv tlqladrsyv hsegkiedvl vrldkfifpa
      121 dfvilecevd kekgqmhnns dadsiqlket yfteeseelm etqqfengcr rnfe
//
LOCUS       XP_016690845             129 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690845
VERSION     XP_016690845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835356.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..129
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15285
     CDS             1..129
                     /gene="LOC107908086"
                     /coded_by="XM_016835356.1:1..390"
                     /db_xref="GeneID:107908086"
ORIGIN      
        1 mdivsrlpvt ptkkdyvwvi verylplaev sqwkkvlrfc rkgklsprfi rpycilkcvg
       61 pvvyqlelpp eldhihavfh vlmlrrycsd pthvvfveei evrldltfee elvqilerdv
      121 kvfwkslys
//
LOCUS       XP_040944251             190 aa            linear   PLN 06-AUG-2024
DEFINITION  tropomyosin-1-like [Gossypium hirsutum].
ACCESSION   XP_040944251
VERSION     XP_040944251.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088317.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="tropomyosin-1-like"
                     /calculated_mol_wt=22442
     Region          <11..>159
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..190
                     /gene="LOC121214548"
                     /coded_by="XM_041088317.1:1..573"
                     /db_xref="GeneID:121214548"
ORIGIN      
        1 mkiaglgkns eqwrakirke kekvdrwerk fqetqirned lekslsdsqr ekgelsdrvt
       61 qlerslrqyq nrnsaielra slgkieemkk rieelettlq nceiriecle aieshnkeql
      121 hyfqnhvrsr dhimeeavvq irevvdhiqt lavqadmlsv kyelesdqgq elavllrkir
      181 mlsnraklck
//
LOCUS       XP_040944252             211 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 3.1 [Gossypium hirsutum].
ACCESSION   XP_040944252
VERSION     XP_040944252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088318.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="protein NRT1/ PTR FAMILY 3.1"
                     /calculated_mol_wt=23384
     Region          <3..28
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Region          21..>156
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..211
                     /gene="LOC121214549"
                     /coded_by="XM_041088318.1:1..636"
                     /db_xref="GeneID:121214549"
ORIGIN      
        1 meqareielv hcnseeqiad iftkamtslt lstilpqlrp ppcigeqlcq qatlgqlail
       61 ygslllgalg sggirpcvaa fganqfdeid lkqstktwky fnwyyfvmga silavvtviv
      121 yiqdnigwgw glgiptismf lsiiafvlgy plyrhmdpvg spftrllqvs vgafrkryli
      181 mvsdpnllyq neeldasifi dgrlvhskqm a
//
LOCUS       XP_040944253             190 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00860-like [Gossypium
            hirsutum].
ACCESSION   XP_040944253
VERSION     XP_040944253.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088319.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="uncharacterized mitochondrial protein
                     AtMg00860-like"
                     /calculated_mol_wt=21900
     Region          <3..70
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Region          133..>190
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     CDS             1..190
                     /gene="LOC121214550"
                     /coded_by="XM_041088319.1:1..573"
                     /db_xref="GeneID:121214550"
ORIGIN      
        1 mdlmnhifqp yldqfvvvfi ddiliylrlg aghdnhlrim lqvlretqly gnlskcelwl
       61 sdmvvlghvi stegihvdlk kieailqwka pknvseiwns ldlvgyhrrf mnefskiatp
      121 mmkllqksss fiwndqfqes feklkvmlkk aliltllelg kkfvvyndis lnglgcvliq
      181 dgkvityasr
//
LOCUS       XP_040944254             865 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944254
VERSION     XP_040944254.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088320.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..865
                     /product="uncharacterized protein"
                     /calculated_mol_wt=98427
     Region          565..646
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(568,570,572,598..600,639)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            568..570
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            568
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(598..601,605..608)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..865
                     /gene="LOC107921702"
                     /coded_by="XM_041088320.1:1..2598"
                     /db_xref="GeneID:107921702"
ORIGIN      
        1 mdqrleqfqk emqdqlqqkm neqleniqqk mmdkmmesqg nmmtkltqll tggvdkgkss
       61 vlnveegdse gpvyppgftp qqvkvyphks svtikpqqfq agtttpmnlq agsenatrng
      121 kidvgessrr saskkkenev nnasyskmit vnqprnvavd kqgadtrqnk eksqftpipm
      181 sykelyqrlf nahvvspfyl eplqppypkw ynanaqcdyq agivghsieh cmafkklver
      241 liglsvvkld dspktenplp dhngvnmigg smgrrikedv aevkiplrwv wrkmverrlf
      301 vldsersfeg venycefhhg egheiqecte fralvqgmmd ykemefyeev keegsictse
      361 stkvprvvqp vviisrpknn evrmpvtpri iikkpatfsy qdsrrvpwny ecnttvpgke
      421 ttkdqgvsan pepvkgrait veqkiaepvl sinklvkeee aveflkflkh seynvveqlh
      481 kqparifvla lllnseahrc almkvlnety vandisvvkl drlvnnisad nfiffnddei
      541 ppggmgstka lhittrckgy tfpgvlidng salnmlplst lnrlsidssh mktclnivtt
      601 fdgierkvmg rieiplligp tvyevdflvm dikpsyncll grpwihsvga vpsslhhklk
      661 lvsegrlvti naeediiaav sneapyvetn dearrvcncw wgkgvlprrg lgkylqgkia
      721 vpalkekqdn fslgykpdre qrrkelerrq errrarlnre eikwepmiip hisktfvsgg
      781 iihferrisi kesieetlen mhinavcegt keegsllgic pyepgsvldn wtaekipevf
      841 rtiseyyseq tccfnleiir tllwk
//
LOCUS       XP_016707010             163 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016707010
VERSION     XP_016707010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851521.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18357
     Region          66..>155
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(71..74,104..106,109,133)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..163
                     /gene="LOC107921693"
                     /coded_by="XM_016851521.1:1..492"
                     /db_xref="GeneID:107921693"
ORIGIN      
        1 marwqillse fdivyvsqka ikgsaivdfl asraledykp ldfnfpnedl myvanteeds
       61 qenhswrlnf dgasnalgng igailvspse dyhpftskld fdctnnmaey eacimgiraa
      121 ieqkikslev cgdsalviyq lkgdwetrdp kliryqrldt csq
//
LOCUS       XP_040944255             218 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944255
VERSION     XP_040944255.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088321.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..218
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24709
     CDS             1..218
                     /gene="LOC121214551"
                     /coded_by="XM_041088321.1:1..657"
                     /db_xref="GeneID:121214551"
ORIGIN      
        1 mgeqicktpi iangpndrrv wfhnphgfyt skvghdilpt yekistirre fksecprcga
       61 csetlihalk dcpiaheilv lgglnnnllv gdyiqcidwv eyvtrvldqk vssnfittlw
      121 nswnnrnnly fqgkeeeakv vwervvtlch dfrihnllnk pllpvitaek kwakppydtl
      181 kinfdatvlm kkmgygmlar dsdgfvlggg asvidtdk
//
LOCUS       XP_016706986             843 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016706986
VERSION     XP_016706986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016851497.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..843
                     /product="uncharacterized protein"
                     /calculated_mol_wt=97371
     Region          196..438
                     /region_name="RT_nLTR_like"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; cd01650"
                     /db_xref="CDD:238827"
     Site            order(286..291,326..327,372,374..375)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     Site            order(286..291,326,374)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238827"
     Site            327
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238827"
     Region          618..705
                     /region_name="zf-RVT"
                     /note="zinc-binding in reverse transcriptase; pfam13966"
                     /db_xref="CDD:433612"
     CDS             1..843
                     /gene="LOC107921667"
                     /coded_by="XM_016851497.1:1..2532"
                     /db_xref="GeneID:107921667"
ORIGIN      
        1 mkyklkslgk disrltdgnm sdrstnllkk prsklsqlyd vkeqhwatrs rsqwlregdr
       61 nthyfhvras gcrkknsiek lkevhenwhv dnkeiyhvaw dyfndlfkts insveesdlq
      121 ailecinenm nksltgefsk eeillafnqm gprkafeidg lsgsfykkhw ttvgegvlrl
      181 ckdilhgnks vecvnetliv lipklknpcv manfqpiglc rviykivska lanrlkvvyp
      241 lcisqnqsaf vpskiihdni lvvhelmhyl gsskngpnkg cvvkldmska ydrvewgflk
      301 nvlikmgvkc nsnisdiiip krglrqgdll spylflfymd alscmlihaq einmikgirv
      361 skdgprinhl ffaddallfv rnkqseveaf tkilesfekm yyqsinleks mvyfspstps
      421 phranlssil kmkciptyaf svffvpegil ekiqtivsrm wwggkeksrg wnrlswdrvc
      481 flkgmeglgf rdlkqfnval lgtqrvdkts ftwksiawaa silyegfgwn vgndkkiniw
      541 qenwgvkglt sesiclnrke vnetkvceli nktsdgwkek rvmeiygafm gdqickipil
      601 hngpddyriw fhsslgsylt ksayswmtlk qvgfgphrcf wrlvwklhtl pkikifrwrm
      661 ghdilptyek iskirrefni mcprcgskve tlihalkdcp raravlvheg ldnaivegsy
      721 ercvdwiedm ahlldkkals dfvtvlwniw nnrnnkvfre teedakviwd rattlsrdfr
      781 ifnlmenpmi pklveekgwq klgpgvvkin fdavvkgrrm sfsivardhd sfvlwgaygc
      841 sgl
//
LOCUS       XP_040944256             335 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944256
VERSION     XP_040944256.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088322.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="uncharacterized protein"
                     /calculated_mol_wt=39382
     CDS             1..335
                     /gene="LOC121214552"
                     /coded_by="XM_041088322.1:1..1008"
                     /db_xref="GeneID:121214552"
ORIGIN      
        1 miqreksdsl avryiselwd ftrvsvaqnn lqelkeiwdq wdnevrqlfy lnygdlpyll
       61 dmkvdkclfr alaqfwnpay scftfgrvdl vpkieeytal lrcskvqvdr iyskavnvpt
      121 flrklmniig mseqwvtari kqkgdsrcip wkslrdlila hpdarkkvdv falsiyglim
      181 fpkilghide avtdlfdrld krvtpvpvfs esysplkeiv atsrrndiie ekwmaifqnl
      241 qeenvewrap wllpdkilyr cgdfdwvpll giwgavgyap llvlrqyrsr qfvpatqgla
      301 ecefsykddg ykrkareman awnqtrrmkr lawvq
//
LOCUS       XP_040944257             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944257
VERSION     XP_040944257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088323.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..139
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16289
     Region          <2..84
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     CDS             1..139
                     /gene="LOC121214553"
                     /coded_by="XM_041088323.1:1..420"
                     /db_xref="GeneID:121214553"
ORIGIN      
        1 maeyetcimg icaaiergik vlevygdsal viyqlrgewe trdpklisyr klvlelikef
       61 editfcylpr denqmadala tlasmikvnr ledmkpiqms iyedrthcyn ieegeiddsp
      121 wyqdilryvk nrgekiryc
//
LOCUS       XP_040944258             505 aa            linear   PLN 06-AUG-2024
DEFINITION  enoyl-CoA hydratase 2, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040944258
VERSION     XP_040944258.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088324.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..505
                     /product="enoyl-CoA hydratase 2, peroxisomal"
                     /calculated_mol_wt=56894
     Region          209..505
                     /region_name="PLN02864"
                     /note="enoyl-CoA hydratase"
                     /db_xref="CDD:178455"
     CDS             1..505
                     /gene="LOC121214554"
                     /coded_by="XM_041088324.1:1..1518"
                     /db_xref="GeneID:121214554"
ORIGIN      
        1 mdncstisdl kdlivekeln caedplersl tsdppideee deylallkan qmgynplimp
       61 skrthastqi vetqnkfhce eakvryrsif knqqmhlerg ftlkesnyrd fmarirqqrv
      121 eesedleeae ddpteippeq sievpneakp meqeakpdik tsmfgappas pdlhfifelw
      181 tslskreqsd sckgnndeak desnsegstn yayterdvav yalgvgacgr dtvdidelky
      241 vyhengqyfi kvilihhldv lptfstlfsl rglpqlsgvp dlkfdkrlll hgqqcieihk
      301 plpsnasinn kttivgfhdk gkaailelet rsyekkygei ltlnrtsvfl rgaggfsdps
      361 kpftysnypv nlasamkipk tqpsvvfedc tqppqallyr lsgdynplhs dpmiakvtgf
      421 srtilhglct lgfairaiik cicmgdldmv ksffarfllq vypgealitd lwleglrviy
      481 qvtvkemnqa vlsgyvdlhr laasl
//
LOCUS       XP_016690479             340 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690479
VERSION     XP_016690479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834990.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38613
     Region          <1..71
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     Region          <181..285
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(189,191,216..218,257)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            order(216..219,223..226)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..340
                     /gene="LOC107907652"
                     /coded_by="XM_016834990.1:1..1023"
                     /db_xref="GeneID:107907652"
ORIGIN      
        1 mtwaffqsaf qrkyvkvryi eahrlevtrl kqgersvvey eaeflrlnry aqslvvtdyn
       61 ksrvfealve ktkvveeikr verkrreeek nlskgkrdlg psslaprpkk karfdrpqqv
      121 eaavrvelvs fnrcelqfsi klslrgqfns llgavvssgv vigvvvdrgh gaevqsrlrq
      181 gsllwdmrgs thsyitisvs gnlgilaegn seeisiisls gqsvqvskvy krcpleiqgh
      241 vfpadlmels fkefdlilgl dwleehrvdl dyvtkrvnlk vrdgeevvmv gersavdgiq
      301 tfrdflnvfl eellgllsdr evkfgievll gttpmsiapy
//
LOCUS       XP_016690478             275 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial outer membrane protein porin of 34 kDa [Gossypium
            hirsutum].
ACCESSION   XP_016690478
VERSION     XP_016690478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834989.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..275
                     /product="mitochondrial outer membrane protein porin of 34
                     kDa"
                     /calculated_mol_wt=30034
     Region          27..267
                     /region_name="Porin_3"
                     /note="Eukaryotic porin; pfam01459"
                     /db_xref="CDD:460220"
     CDS             1..275
                     /gene="LOC107907651"
                     /coded_by="XM_016834989.1:1..828"
                     /db_xref="GeneID:107907651"
ORIGIN      
        1 metedsyisl krrrdnsier cgivdessng qaitsarmkk cdlfladvna qlkfrnvttd
       61 ikvdtnsngl qlfttitvde papglktifg fkvpdqrsgk ielqylheya risssigltt
      121 npivnfsgvf gtnvlalgtd isfdtkfgnf tkcnaglsft nadliaslsl hvvmnekgds
      181 vnasyyhivn pstnivvgak vtysfstnvn titvgtqyal dpltiikawv nnasmvsali
      241 qhewlskslf tiygevdtks idkspkvrlv lalkp
//
LOCUS       XP_040944260             366 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At3g15720 [Gossypium hirsutum].
ACCESSION   XP_040944260
VERSION     XP_040944260.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088326.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..366
                     /product="probable polygalacturonase At3g15720"
                     /calculated_mol_wt=39868
     Region          47..>345
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..366
                     /gene="LOC107907649"
                     /coded_by="XM_041088326.1:1..1101"
                     /db_xref="GeneID:107907649"
ORIGIN      
        1 mqlafgfals llfgfafgng ffseetisaf nfgleneifn eqvissfsvm dygatgngqi
       61 ddsqafnkaw kdicnanagg etvtleiprg ktfllnplvf qgpckakair iqlggtliap
      121 lstswanegv dtwiqfsnvd nlyldgdgki dgrgsiwwqs cmkksvygif fyckrrpgal
      181 hfnncnglql kglthlnspr ahisiknckd vivsdlkisa pdespntdgi disdstnvqi
      241 lqsiiatgdd cvainagssf initgvvcgp ghgisigslg dggaydtveq vhvknctlrd
      301 tqngvriktf qgcsgyarki sfekivlsna rnpiiinqfy qdngkfskgi mvrysfllym
      361 tlwniy
//
LOCUS       XP_016690476             370 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690476
VERSION     XP_016690476.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834987.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42197
     Region          256..>318
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     CDS             1..370
                     /gene="LOC107907647"
                     /coded_by="XM_016834987.1:1..1113"
                     /db_xref="GeneID:107907647"
ORIGIN      
        1 mfgsdvpgsd asendvsnri rvnldglnmd gievdelcds ddsgrldsah esdlendmsn
       61 prlkvgmlfk sksslkeaak hygrlnsyfi kfpkndlkwl ktvysekcsw fiwasrlnpn
      121 dptdqtwqir ssnpnhtcsk vyknknvtsa wigehykekf iadpdysmks lqqdvkrdlc
      181 civsltkcrr aklkalelik gahkaqyeki yeyllevrmq negsatiyyl dnrlfqriyv
      241 ylqackdgyk agcrrivgld gcflkgyygv yllatigida nngsypiayv avesenqapw
      301 lwflellaid leimilearg kpiltmmeiv rtkimllivk keedekwkgt lcvpshaggd
      361 kyqveygpsn
//
LOCUS       XP_016690475             232 aa            linear   PLN 06-AUG-2024
DEFINITION  intermediate filament protein ifa-1-like [Gossypium hirsutum].
ACCESSION   XP_016690475
VERSION     XP_016690475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834986.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..232
                     /product="intermediate filament protein ifa-1-like"
                     /calculated_mol_wt=27453
     Region          <32..>226
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..232
                     /gene="LOC107907646"
                     /coded_by="XM_016834986.1:1..699"
                     /db_xref="GeneID:107907646"
ORIGIN      
        1 mkrlavgpmt tpeysewwvr rindnisgss lensqsieeh lrvvpselei inqdferrna
       61 elekkieqme eekmnlrldv dvqkfeadkl rkgkkkaeee ldslkmdykk lrlsmrtagl
      121 rktseqwree ireeknrsdw werkfqevqt qnetleksfs esqkekselr drlvelegsl
      181 rqlrsrnsvi elkaslskie emkgkieele aalrscevri ehleakeggq ie
//
LOCUS       XP_016690472             125 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690472
VERSION     XP_016690472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834983.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14526
     CDS             1..125
                     /gene="LOC107907643"
                     /coded_by="XM_016834983.1:1..378"
                     /db_xref="GeneID:107907643"
ORIGIN      
        1 mdwsstgtnr llelneveef rlqayenakl ykekskrwhd nkilprqfap gqqvllfnsr
       61 fklfpeklks rwsgpfeilh vyshgdvvvk ddkigstfkv ngqrlkhyfg apiirdknsi
      121 sfqaa
//
LOCUS       XP_040944261             385 aa            linear   PLN 06-AUG-2024
DEFINITION  aminoacylase-1 [Gossypium hirsutum].
ACCESSION   XP_040944261
VERSION     XP_040944261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088327.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="aminoacylase-1"
                     /calculated_mol_wt=43133
     Region          66..>372
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..385
                     /gene="LOC107907642"
                     /coded_by="XM_041088327.1:1..1158"
                     /db_xref="GeneID:107907642"
ORIGIN      
        1 mapqkglcll issfrtsvls lcgiyhrygd shcspcqrvi vhlllfssll sftnptpspt
       61 qdeqsqiisr fqeylrints qpspnykkst qfilslaesl sletqviefv qgkplvilkw
      121 pgsdlflpsi llnshtdvvp serskwdyhp fgahidengn ifargsqdmk cvgmqymeav
      181 rrlkasgfqp krslylsfvp deeigghdgl eklaqsdvfk nmnvdivlde glaspnenyr
      241 lfygermpww lvikatgapg hgaklydnsa ienlfksies irrfrasqfd lvktglkgeg
      301 evisvnmafl kagtpsptgf vmnlqpseae agfdirippt vnaeflekri aeewapasrn
      361 msfegimesv ekwevtwrll glvlm
//
LOCUS       XP_016691122             176 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691122
VERSION     XP_016691122.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835633.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..176
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19548
     CDS             1..176
                     /gene="LOC107908460"
                     /coded_by="XM_016835633.2:1..531"
                     /db_xref="GeneID:107908460"
ORIGIN      
        1 maeqmplkra reetqssdee tkchksydhi lslleaeede pnqdlssllt tlqqelssds
       61 vlddplpypt saaldagqkn prpnttaeat ntntitgsle dediqddkek virhlleasd
      121 delgipnreh gfdvgvfefe qgcnnggngl alcdrlwefe ddaanyytll qselfl
//
LOCUS       XP_040944262             864 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944262
VERSION     XP_040944262.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088328.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..864
                     /product="uncharacterized protein"
                     /calculated_mol_wt=97274
     Region          150..224
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          348..436
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(362,364,366,389..391,430)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            362..364
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            362
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(389..392,396..399)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          574..683
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     CDS             1..864
                     /gene="LOC121214555"
                     /coded_by="XM_041088328.1:1..2595"
                     /db_xref="GeneID:121214555"
ORIGIN      
        1 mskevegvet rgrarkasrs rdilsaledr vvtlessmgd ikervedvdd rlhdglqsmq
       61 eqlkeyvtdn mkqltgrdda ieamvvalkg eiaklkgelt iykvalgngg laaaapkpni
      121 dvpkpkefkg irsardvdnf lwgieqyfca kgitedvtke efrcefkaqf ypeyaedear
      181 arlrrlaqqg tvreyvqefs elmlqisdmg ekeaffsfmn glkpwakqel qrrgvqeltk
      241 amsvaeslae fggrkdnsns skprlkgnsg gdkempsrng dgkkpwdkrk sgpircfhce
      301 gphmikdcpk kaalkameak gesdvednnl gsilggvedr mshglmfvdi ivagrklnal
      361 vdtgasdlfm seeaayklgl kidnergrik tvnsesipik gvakgvdlql gnwsgkvsik
      421 viplddydfv vglsfldqvk aliapssnym visdakhqcm vkvtrkrsfe gktlaaiqfa
      481 kgvrrneisy latlkieeta epvsetpkev gqllqsfrdv mpaqlpkslp pkrevdhkie
      541 lvsnvvppar apyrmslpel eelrkqlkel ldagfirpsk slygapvlfq kkhdgslrmc
      601 idyralnkit vknrypipli adlfdqlgsa rwftkldlrs gyhqvriveg depktacvtr
      661 ksleehvrhl revfqtlren elfskyatfi pvtkecpaee aaqlflrhvq sgttnqspfe
      721 ivtsqqpltp navvthytgp npaayrfakd wqekndlara clhkaskrsk kwadqnrrdv
      781 qfqvgdsvla klhlilrytg lhkglvrrye gsfkvvkrvg kvayklelpp klkvhpvfhv
      841 smlkpfyedq eypnrgkser apmg
//
LOCUS       XP_040944263             213 aa            linear   PLN 06-AUG-2024
DEFINITION  peter Pan-like protein [Gossypium hirsutum].
ACCESSION   XP_040944263
VERSION     XP_040944263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088329.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..213
                     /product="peter Pan-like protein"
                     /calculated_mol_wt=23522
     Region          123..>198
                     /region_name="Brix"
                     /note="The Brix domain is found in a number of eukaryotic
                     proteins; cl00935"
                     /db_xref="CDD:469999"
     CDS             1..213
                     /gene="LOC107907961"
                     /coded_by="XM_041088329.1:1..642"
                     /db_xref="GeneID:107907961"
ORIGIN      
        1 msgdvaekcv peeafclrgq kslpqrrvsc hlivsvlpsp akiccstpps psqhqqqfss
       61 nqistvsdrl lviptavase nfpffknpal npsplsilhs nklwqqqpnv dhitgnkirn
      121 ssvfsrgklp gplrqlqmdl rklmlpytal klkekkrnnl kdflnvagpm gvthflvlsk
      181 ietspilrva ktpqgptlnc alvarrifsr ill
//
LOCUS       XP_016690739             175 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00820-like [Gossypium
            hirsutum].
ACCESSION   XP_016690739
VERSION     XP_016690739.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835250.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="uncharacterized mitochondrial protein
                     AtMg00820-like"
                     /calculated_mol_wt=19192
     Region          100..>175
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     CDS             1..175
                     /gene="LOC107907955"
                     /coded_by="XM_016835250.1:1..528"
                     /db_xref="GeneID:107907955"
ORIGIN      
        1 msspahvass sssndtvvqg algnktpelr rghrekfpsm klqyfvthtv tkkgpsptsp
       61 askpssaise rvepqsfket vrdagwsdam qkeicaledn ntwsvetlpp rkktlgskwv
      121 ykikynsdgs idrlkarfvf fgnhqvecig ynetstsvak mvivhaflti aaskn
//
LOCUS       XP_016690741             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690741
VERSION     XP_016690741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835252.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15765
     CDS             1..135
                     /gene="LOC107907957"
                     /coded_by="XM_016835252.1:1..408"
                     /db_xref="GeneID:107907957"
ORIGIN      
        1 mvlelmdefd ditfcylprd enqiadalad alatlafmir ekddhpwyln ilryvknrey
       61 pdqatendkr alrrmaidyv ldgkilykkg kdqvllrcvd avevrkilee vhegicgtht
      121 ngfimarqim rfgyf
//
LOCUS       XP_016676257             128 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016676257
VERSION     XP_016676257.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820768.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14860
     CDS             1..128
                     /gene="LOC107895501"
                     /coded_by="XM_016820768.1:1..387"
                     /db_xref="GeneID:107895501"
ORIGIN      
        1 mgslslgrrc fqfgdfvdma klddlgfkgp pftwhrgrhf erldralrne twikyflnsl
       61 ithlpkinsv hkpllfslnt eislprgrpf rffagwvehp elgdfvndkw rfsgtmskal
      121 akfteclk
//
LOCUS       XP_016707690             183 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g62260,
            mitochondrial-like [Gossypium hirsutum].
ACCESSION   XP_016707690
VERSION     XP_016707690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016852201.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..183
                     /product="pentatricopeptide repeat-containing protein
                     At1g62260, mitochondrial-like"
                     /calculated_mol_wt=20653
     Region          <11..>172
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          74..96
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          101..127
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          132..157
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..183
                     /gene="LOC107922260"
                     /coded_by="XM_016852201.1:1..552"
                     /db_xref="GeneID:107922260"
ORIGIN      
        1 mvdlqlsied lklaiwladl regrlvhnil ikygfefdqi iggvliefys dceaivdakr
       61 vydgvtnpcl nasnslirgl isigriddae lifntivean lisyhllikg yvtcgraeds
      121 krsfeemflr tiistntmis vypksgeigk alklfeetrg ernpvtwnsm msgyiqneqy
      181 ket
//
LOCUS       XP_016724703             131 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxiredoxin-like 2A [Gossypium hirsutum].
ACCESSION   XP_016724703
VERSION     XP_016724703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869214.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..131
                     /product="peroxiredoxin-like 2A"
                     /calculated_mol_wt=14369
     Region          <2..91
                     /region_name="AhpC-TSA_2"
                     /note="AhpC/TSA antioxidant enzyme; pfam13911"
                     /db_xref="CDD:433575"
     CDS             1..131
                     /gene="LOC107936479"
                     /coded_by="XM_016869214.2:1..396"
                     /db_xref="GeneID:107936479"
ORIGIN      
        1 mqikdfwpry wggvvvfdrt tgffkalggg kllkdkflsg fvfnpraian ykraksmgie
       61 qnfkgegeik gglfivgpgg tglayqfier nfgdwapvae vveicarlkn qqqdegdssr
      121 spqehkcsgs s
//
LOCUS       XP_040944264             204 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944264
VERSION     XP_040944264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088330.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22236
     Region          <142..>197
                     /region_name="PRK14294"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:237664"
     CDS             1..204
                     /gene="LOC107936691"
                     /coded_by="XM_041088330.1:1..615"
                     /db_xref="GeneID:107936691"
ORIGIN      
        1 mvspsqsttl ctltravdpk hdpsevsgrh rstkaeiksy rkskvrinvv dpnpansnyd
       61 irrssdifrk irsqhrfsas pspspsltpd lplavsqhrf stpdtgvhqs fspsspfvvk
      121 ictvvhlrls kaaeknqstk ptsivcadce gngakqcsqc kgtgvnlvdh fngqfkaggl
      181 cwlcrgkrei lcgncngwiy ehlg
//
LOCUS       XP_016700221             112 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein arginine N-methyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016700221
VERSION     XP_016700221.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016844732.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..112
                     /product="probable protein arginine N-methyltransferase 1"
                     /calculated_mol_wt=12465
     CDS             1..112
                     /gene="LOC107915594"
                     /coded_by="XM_016844732.1:1..339"
                     /db_xref="GeneID:107915594"
ORIGIN      
        1 mlvkdakmkv gerserveve cshmadmakq ivetnglpdg evfkivvssc iascgwrqla
       61 tllvkfsvac ydlqkvddgv vlpdeaslyl taiedaeykd dkieyeynrl ln
//
LOCUS       XP_016700521             444 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein, partial [Gossypium hirsutum].
ACCESSION   XP_016700521
VERSION     XP_016700521.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845032.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016700521.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..444
                     /product="uncharacterized protein"
     Region          <19..240
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
     Region          303..>381
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     CDS             1..444
                     /gene="LOC107915828"
                     /coded_by="XM_016845032.2:<1..1335"
                     /db_xref="GeneID:107915828"
ORIGIN      
        1 faldssyikl nvsvsfvdlf vflfhlqqfg qpqwltikgh shfvkrvsem letkgcqfkl
       61 gcevqsvlpa dngttmvcgd gfqetyngci mavdaptalk llgnqatfee trvlgafqya
      121 tsdiflhrds tlmpqnksaw salnflnssk nnafltywln alqyigktse pffvtvnpdh
      181 tpkntllkws tghaipsvaa skaslelgqi qgkrgiwfcg ydfnqdelka gmdaahgilg
      241 khssvlhspk nmspsfmett arlfvtkffq qyismgcvtf leeggriftf kgnmekcplk
      301 tvlkvhnpqf ywrimkeadi gladayihgd fsfldetegl lnlfrilvan kensaasgsn
      361 krrtwwspal ltasissaky fvkhllrqnt itqarrnisr vvcaampsrr rtksrelprp
      421 iveelvglci nhgsghfcfl fstl
//
LOCUS       XP_016690738             234 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690738
VERSION     XP_016690738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835249.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26476
     Region          <1..80
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..234
                     /gene="LOC107907954"
                     /coded_by="XM_016835249.1:1..705"
                     /db_xref="GeneID:107907954"
ORIGIN      
        1 mkdsktikqy adrimatvnn irllgeefsg qrivekvitt flekyeakis fledsrdlst
       61 ipltelinal yaqeqrrekr iedhykgafq arsressgsn lnskgkkpwt ekkkkeptkk
      121 kfpscvhfri gngelleakg kgkamistkl gnktisevly vpgidqnlls vgqllekgys
      181 lvfeskicmi knaagevltt iamqdrtfiv dvnqlqaray asqtdeanlw hrrl
//
LOCUS       XP_040944266             148 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944266
VERSION     XP_040944266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088332.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..148
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16303
     CDS             1..148
                     /gene="LOC121214557"
                     /coded_by="XM_041088332.1:1..447"
                     /db_xref="GeneID:121214557"
ORIGIN      
        1 mkkrpncnal qsqrdcarky pirrkhadpp pgsghcadfh faienkkkts ksflsflcfl
       61 ktqyllllls ssttpvnsre gftvasprlw htegitdgga ppakgdwrrk wrgrrdrgqa
      121 rmgrpaaseg qgsktlgaal gffsetla
//
LOCUS       XP_016690719             163 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690719
VERSION     XP_016690719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835230.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18654
     Region          31..121
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..163
                     /gene="LOC107907931"
                     /coded_by="XM_016835230.1:1..492"
                     /db_xref="GeneID:107907931"
ORIGIN      
        1 mfesrrdpra hlmqyndymn mlgapdaakc kafstnlkgs akdsylslpq gsiqsfsqlg
       61 qmflgrflvy rtimstpmgl ifvkqreges lqdyikrfha atlntknlkd qwaidafivg
      121 vlneyvqysf tgnrpqslad lykrahkftk veeikkqyfp kgl
//
LOCUS       XP_040944267             159 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamic acid-rich protein-like [Gossypium hirsutum].
ACCESSION   XP_040944267
VERSION     XP_040944267.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088333.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="glutamic acid-rich protein-like"
                     /calculated_mol_wt=17963
     CDS             1..159
                     /gene="LOC121214558"
                     /coded_by="XM_041088333.1:1..480"
                     /db_xref="GeneID:121214558"
ORIGIN      
        1 msmmgdvkrq igkgipsnie dnprrqgkeh mkeialqsgk vlsspetttt kkiaknnddp
       61 qeksleagde pepeevttsv aetekeitkd sadaqilfss tleekqkrde defvpnytpd
      121 mfgptemeqe eevnesekee dreeeeedgs eemdfeedd
//
LOCUS       XP_040944268             221 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 6 homolog [Gossypium
            hirsutum].
ACCESSION   XP_040944268
VERSION     XP_040944268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088334.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="26S proteasome non-ATPase regulatory subunit 6
                     homolog"
                     /calculated_mol_wt=25143
     Region          <3..59
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
     Region          <66..214
                     /region_name="RPN7"
                     /note="26S proteasome regulatory complex component,
                     contains PCI domain [Posttranslational modification,
                     protein turnover, chaperones]; COG5187"
                     /db_xref="CDD:227514"
     CDS             1..221
                     /gene="LOC121214559"
                     /coded_by="XM_041088334.1:1..666"
                     /db_xref="GeneID:121214559"
ORIGIN      
        1 msshgifhls npggvsiirn cqqrgfhphe epsdgtpvye hcshvfmnpk ikfdvvdlry
       61 cfqagvslkq kvvdapeilt vigkiphlsk flnslyncqy ksfflafagl teqikldryl
      121 hlrfrfymre vrtvvysqfl eshksvtiea makafgvtve fidpelsrfi avgklhckid
      181 kvagvletnr pdaknalyqa tikhgdflln riqelsrvid l
//
LOCUS       XP_040944270             238 aa            linear   PLN 06-AUG-2024
DEFINITION  secreted RxLR effector protein 161-like [Gossypium hirsutum].
ACCESSION   XP_040944270
VERSION     XP_040944270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088336.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..238
                     /product="secreted RxLR effector protein 161-like"
                     /calculated_mol_wt=27253
     Region          <2..83
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          167..>235
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     CDS             1..238
                     /gene="LOC121214560"
                     /coded_by="XM_041088336.1:1..717"
                     /db_xref="GeneID:121214560"
ORIGIN      
        1 mlfvalyvdd lifmgnngem ildfkskmtq efemtdlglm kfflglevqq ertgifvsle
       61 vyakeilkky kmthcnpvst pmepgvklsk fdggervdas kyrslvgslr yltctrpdis
      121 lsvgivsrfm eepvyshwka lkrilryiqg tvslglfysn medykligys dsdwygdldd
      181 rkstlgyvff mgnttfawls kkqpivtlst ceaeyvaasw clchaiwlkn llgeleqr
//
LOCUS       XP_040944271             411 aa            linear   PLN 06-AUG-2024
DEFINITION  protein arginine N-methyltransferase 1.1 [Gossypium hirsutum].
ACCESSION   XP_040944271
VERSION     XP_040944271.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088337.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..411
                     /product="protein arginine N-methyltransferase 1.1"
                     /calculated_mol_wt=46165
     Region          106..>180
                     /region_name="COG4076"
                     /note="Predicted RNA methylase [General function
                     prediction only]"
                     /db_xref="CDD:443253"
     CDS             1..411
                     /gene="LOC107909948"
                     /coded_by="XM_041088337.1:1..1236"
                     /db_xref="GeneID:107909948"
ORIGIN      
        1 mayalsvven idstgpscyy eipnttqtst nssnnfegan irfrdaddke iasnssnldd
       61 sivavdkase yvsmgepdvs ffgcdgeddk tsadyyfdsy shfgiheeml kdvvrtktyq
      121 nviyrnkflf qnkvvldvga gtrilslfca kvgaahvyav ecshmadmak qivetnglpd
      181 gefasllfrv vnglgllnlf llllikakll lgsyklhslq skflflhpcq vddgvvlpde
      241 aslyltaied aeykvdkief wnnvygfdms cikkqammep lvdtvdqkqi vtnchllktm
      301 diskmvrrds sftapfklia erddyihafv ayfdvsftkc hklmgfstgp rsrathwkqt
      361 vlyledvlti cegetiigsm tvgylvcmfl krftniflip fllsffskgf p
//
LOCUS       XP_040944272             213 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944272
VERSION     XP_040944272.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088338.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..213
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24415
     Region          <124..184
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     CDS             1..213
                     /gene="LOC107909947"
                     /coded_by="XM_041088338.1:1..642"
                     /db_xref="GeneID:107909947"
ORIGIN      
        1 mvrergahqi wlhrryllal hddsiwvatt dssfhrwpae grnpqkvfqr ggsfkkatvy
       61 kepifsipgt pavvqheiln nrrhvltkda aglvklweit rgvvvedygq vsfnekkqql
      121 femeelryql favakhsgfr ptsghyvcyi rsspnmwhkm ndsrvtcvee eavlsqeayi
      181 llyakqgipw fstaievqkp cadprisdss pns
//
LOCUS       XP_040944273             165 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944273
VERSION     XP_040944273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088339.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..165
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18035
     CDS             1..165
                     /gene="LOC121214561"
                     /coded_by="XM_041088339.1:1..498"
                     /db_xref="GeneID:121214561"
ORIGIN      
        1 mrstgksyql vlkkskehyn fstasigyss rdsgtrrssp kpqatsvasv gsvrdvwpec
       61 khckkphyge cqlkngacfr cgsldhylkd cpkkfekeka qtmrlsntaa rgrpphnpgn
      121 vsgshgvtkd savrsmaqap vrayairtrd dasapdvitd eslly
//
LOCUS       XP_016690702             233 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAINTENANCE OF MERISTEMS-like [Gossypium hirsutum].
ACCESSION   XP_016690702
VERSION     XP_016690702.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835213.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690702.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..233
                     /product="protein MAINTENANCE OF MERISTEMS-like"
                     /calculated_mol_wt=25424
     Region          61..>232
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..233
                     /gene="LOC107907911"
                     /coded_by="XM_016835213.2:1..702"
                     /db_xref="GeneID:107907911"
ORIGIN      
        1 mislirtdrh isdaanntds yrllrgrtsv wktapdarlm pyleqarfgs aalirssdvr
       61 ydlisalvkr wrsethtfhf lcgectvtle dvaiqlglpi dgslvtgvss ftdpaalcye
      121 llgdspgdge knftglqftw lkakfgqlsa tategelmca arayimhivg gvimsdannd
      181 kvhlmylpll adlstvssys wgsavlamly qelcrvtnpd vvdmggcfpl lqs
//
LOCUS       XP_040944274             205 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAINTENANCE OF MERISTEMS-like [Gossypium hirsutum].
ACCESSION   XP_040944274
VERSION     XP_040944274.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088340.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="protein MAINTENANCE OF MERISTEMS-like"
                     /calculated_mol_wt=22176
     Region          64..>204
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..205
                     /gene="LOC121214562"
                     /coded_by="XM_041088340.1:1..618"
                     /db_xref="GeneID:121214562"
ORIGIN      
        1 mtslirtdrh isdaanntds yrllrgrtsv wktapdarlm pyleqagfgs aalirssdvr
       61 ydlifallrl pidgslvtgv ssftdpaalc yellgdspgd geknftglqf twlkakfgql
      121 satategelm caarayimyi vggvimsdan ndkvhlmylp lladlstvss yswgsavlam
      181 lyqelcrvtn pdvvdmggcl pllqs
//
LOCUS       XP_016690710             185 aa            linear   PLN 06-AUG-2024
DEFINITION  chromatin assembly factor 1 subunit A-like [Gossypium hirsutum].
ACCESSION   XP_016690710
VERSION     XP_016690710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835221.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..185
                     /product="chromatin assembly factor 1 subunit A-like"
                     /calculated_mol_wt=22144
     Region          <47..>182
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..185
                     /gene="LOC107907917"
                     /coded_by="XM_016835221.2:1..558"
                     /db_xref="GeneID:107907917"
ORIGIN      
        1 mkrlavdpmt tleynewwvk rindnipgps lensqsieeh lrvvptelei ikqdfekkna
       61 elekkieqme eekvnlrldv dvqkleadkl rkgknkaeee ldslktdykk lrllmrtagl
      121 rktseqwree ireeknrsdr werkfqemqa rnealekswl esqkekgelk drvvelegsl
      181 rqhrs
//
LOCUS       XP_016690707             354 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690707
VERSION     XP_016690707.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835218.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..354
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40529
     CDS             1..354
                     /gene="LOC107907914"
                     /coded_by="XM_016835218.1:1..1065"
                     /db_xref="GeneID:107907914"
ORIGIN      
        1 mcaflnhvgq ypcslhnnae kifqdllnqs whidkvinaq sldenednas rnishmiqke
       61 ilhilankvr hkihkdigds kfcfiideay gesktitlkd eicaglsrhf ldvqniqgqg
      121 ydgasnmqge wnslqalfln dcpyayyvhy lalksasckf hdqlqvaqai gianmlvide
      181 leigkglnqi gtvkrareth wsshfcsvcs lirmfdatcy vlanviesgs nyfirgdsat
      241 tykkitsfyy vfildlvkei mgiidilcqh lqqksqdivn vmylvlstkt miqklrengw
      301 gnllevveaf fekhnikvfy mdspyvvkhd chqhvdfnme hhyrveifna ains
//
LOCUS       XP_016690708             139 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690708
VERSION     XP_016690708.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835219.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..139
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16200
     CDS             1..139
                     /gene="LOC107907915"
                     /coded_by="XM_016835219.1:1..420"
                     /db_xref="GeneID:107907915"
ORIGIN      
        1 merirndqii edlvlqnkrn adisriiddr grpirehvvp ilddlnlgiv rphiqaqlfe
       61 lkpvifqmlq tigqfsglpt edprlhlrlf levydsfkqq dvpedtlrlk lfpyslrdra
      121 rswlnvlpsg tmaswnelc
//
LOCUS       XP_016690728             264 aa            linear   PLN 06-AUG-2024
DEFINITION  putative aquaporin NIP4-1 [Gossypium hirsutum].
ACCESSION   XP_016690728
VERSION     XP_016690728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835239.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..264
                     /product="putative aquaporin NIP4-1"
                     /calculated_mol_wt=28339
     Region          15..263
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(65,83..85,193..194,197,200)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(85..87,197..199)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..264
                     /gene="LOC107907942"
                     /coded_by="XM_016835239.2:1..795"
                     /db_xref="GeneID:107907942"
ORIGIN      
        1 msameegmfl tvkqicyspd avkfmqkvia elvgtyfvif agcgsvvvnk lydgivtfpg
       61 isvvwglicm vmiysvghis gahfnpavti tfcifrrfpm kqvpvyvvaq llgsilaset
      121 ltlvwdiprd affgtvpvgp asrslvleii isfllmfvvs gvatdsraig elagiavrmt
      181 itlnvfvvgp isgasmnpar tlgpaivmrv ydgiwvymvg pmlgtvsggf vynlirftdk
      241 plseltrsss fvksmsksta tatl
//
LOCUS       XP_040944275             683 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944275
VERSION     XP_040944275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088341.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..683
                     /product="uncharacterized protein"
                     /calculated_mol_wt=78365
     Region          335..426
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          <486..591
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            513
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     Region          <603..647
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..683
                     /gene="LOC121214564"
                     /coded_by="XM_041088341.1:1..2052"
                     /db_xref="GeneID:121214564"
ORIGIN      
        1 msdddndgvd qkmytgddvs neldgtesat psvnlvstqq pnvergniee kdysqllrai
       61 adalqrlkgv dpstaeiwie sikrilqqle cnphesvicv vsllqgeayt wyaiefvpte
      121 idsckrflrg lrdelrvllv shritefadl veraimveqv lgsnnkieni rtvgkrpgaa
      181 ssnpqpkrsk efrgswrsnf ksdrtcnspr smpasrgrrs crsgsfsrgd arkgndavaq
      241 qseaktptra yvvqtredgd andvvigpvm lhnlvadalq rvaetapatt svstqrrapi
      301 kelrkygaie flglkevdps ivenwmestk rflqqleyea yiwwesvirh lpieqvtwdl
      361 ferefqkkyi gelyiedkrq eflmlkqgdl svvdyepefs klsryafefi likadsckrl
      421 lrglrdeirc sqirtvcefl dvfpeelpgl ppdrevefai evypgiapis vppyrispte
      481 lkelklkvke sdvpktalht ryghyeflvm pfgltnapaa fmdlmnrifq lyldqfvvvf
      541 iddilvysks esehdqhiri vlqilrdkql yeklskcefw lsevvflghv iladgfelfq
      601 irlkrlsngn rlriqrrwie llkdydyvid yhpgkanvvv dalsriaaie lremfarini
      661 sddgsllael riksamldqi rst
//
LOCUS       XP_016690726             458 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690726
VERSION     XP_016690726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835237.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..458
                     /product="uncharacterized protein"
                     /calculated_mol_wt=52556
     Region          <128..212
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(143..146,150..153)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          <286..393
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            315
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     Region          406..>457
                     /region_name="RT_RNaseH"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17917"
                     /db_xref="CDD:465565"
     CDS             1..458
                     /gene="LOC107907940"
                     /coded_by="XM_016835237.1:1..1377"
                     /db_xref="GeneID:107907940"
ORIGIN      
        1 mrttrvgllg lvglftnsqa rlrddkgtqk lgpwalykpg ksnkyveary vearrrefmg
       61 ltqgdrfvae yeseflryei pqepelvvkv epvarveqvs icgfynrhhp gecwrrigac
      121 yrpcsvsgnl gifaentsse lsivsplgqs lqvskvfrrf lleiqgfvfl tnlmdlpfqe
      181 fnlilgmdwl akhrvgldce pkrvtfrvgd gekvvmvgec reylsnmiys lvakklvckr
      241 cdaylayvyg mrivgstveg ihtikdfpnv vpeelsglpp nrevefqiev keadvhktaf
      301 rthyghyefl vmplglnntp vafmdlmspv fqpyvdqffv mfiddilvyf ktedehdkhl
      361 rvvlqillek elyaklskce lwlgeviflg hvisvegyyr rfaegfslit asltkflccv
      421 lmqqgkvvay asrqlkqhed nypthdlelv avvfelki
//
LOCUS       XP_016690722             380 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690722
VERSION     XP_016690722.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835233.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690722.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..380
                     /product="uncharacterized protein"
                     /calculated_mol_wt=42505
     Region          115..209
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     CDS             1..380
                     /gene="LOC107907935"
                     /coded_by="XM_016835233.2:1..1143"
                     /db_xref="GeneID:107907935"
ORIGIN      
        1 mllrsgrrts efpvnttgqq aeyfnpqvep nvakepnman qtlkqlaapn laaqppsity
       61 paldrplkln sgflnmlpkf nglpsedlys hineflitcs tmqpdgieee qiklrafpfs
      121 lqglakdwly ymppgsfttw tglhkaflek yfpasrigsi kneicgikql vgeslyecwe
      181 rfkrlcascp qhqiseqllv qyfyegltpq drgmidaasg galvdktpaq arnlianmaq
      241 ntqqfglrrs dlgkrmdegq ssmmeaqlan ltamvsklmt ggnakaslcg iccleghttd
      301 mcptlqegea navfpnqrry dpysatyneg wrdhpnlryq nratppgfeq qnsrqynlsq
      361 qqpshqnlsa etkthaclnk
//
LOCUS       XP_016690992             281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690992
VERSION     XP_016690992.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835503.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690992.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..281
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31004
     Region          <102..155
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          185..>214
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..281
                     /gene="LOC107908276"
                     /coded_by="XM_016835503.2:1..846"
                     /db_xref="GeneID:107908276"
ORIGIN      
        1 mgwricrnyr klnnatrkyh sgfsfpnkml drfdgkeydy flygygwydk lpfdttmvnd
       61 asssasaslr flffpslrre yqhkkatsns slfpaltlvm issyrntadv lweaiangqv
      121 lslyqglgtk nlqsfisqfi yfygysffkr lylkktgnkt igtkanlivg vaagactvii
      181 tqqscilefd gaskgnprpi gaaavlktda gnvehgvdqa dliafllels fhtpgetltg
      241 rdipslyvtl rdadggtkep lilcrgvdvg revaghdvas g
//
LOCUS       XP_016690697             446 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690697
VERSION     XP_016690697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835208.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..446
                     /product="uncharacterized protein"
                     /calculated_mol_wt=50410
     Region          148..245
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(163,165,167,191..193,238)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            163..165
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            163
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(191..194,198..201)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..446
                     /gene="LOC107907905"
                     /coded_by="XM_016835208.1:1..1341"
                     /db_xref="GeneID:107907905"
ORIGIN      
        1 mpradaqlsr kapreaeesh lqqatdsrka asseqkvqvf elqvekcsna ndqqrsyapk
       61 apfpqrlrke kldnfnakil dtfrkvqvni plinaikqfp ryakflkelc tskrklignk
      121 kiglgenvsa vfqnklppkc kdsgmfsipc kigdlkldra mldlgasinv mprsiydkvq
      181 lgslketrli iqladrsnay ldgvledvlv qvnelvfpad fyildmgpnd nsidvalllg
      241 rpflktartk idvykgnltm efdgeiikfn tfdamryptd insvfaldvi dnfvqdvyel
      301 geddelksvl aksffdideh efiisdslfn svcaldspql thfkpifpsl tvthkqipsl
      361 isppklelke lpenlkyifl genqtlpliv snaltkiqes kllrvlrehk eafswtlani
      421 rglsmtlcth kialepnpva krdpqr
//
LOCUS       XP_016690698             281 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g47360 [Gossypium
            hirsutum].
ACCESSION   XP_016690698
VERSION     XP_016690698.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835209.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690698.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..281
                     /product="pentatricopeptide repeat-containing protein
                     At5g47360"
                     /calculated_mol_wt=31638
     Region          <2..>147
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          16..65
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          20..47
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          53..82
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          90..117
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          125..150
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          158..206
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          159..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          192..243
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          194..223
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          231..260
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..281
                     /gene="LOC107907906"
                     /coded_by="XM_016835209.2:315..1160"
                     /db_xref="GeneID:107907906"
ORIGIN      
        1 mghklmieig lidlypdmrt yfamvkgfcn agrleeacel fqamkgqgfs pnvvayfmll
       61 egickhmstr kelellgemd kagrncspnv iiytfviksf cekgqtikal rilnrmeacq
      121 cvpnciivit limglcvegh vkeacklidr vtgrgvsnsd cysslvlali rinrlnevek
      181 lfrkmlvsga kpsaiacstm ireicregqv ldsfclynei ermqyfssid teiysillvg
      241 lcqqnhsvea tklarlmlrk rvrleapyde iimeanvltt l
//
LOCUS       XP_040944276             216 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944276
VERSION     XP_040944276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088342.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23784
     CDS             1..216
                     /gene="LOC121214566"
                     /coded_by="XM_041088342.1:73..723"
                     /db_xref="GeneID:121214566"
ORIGIN      
        1 mgkpfqsqak kfkemntrsn vssvnfqrdr grqysgskaq atsmastgsv kptrpecqhc
       61 gkrhlgecyl isracfkcgs qdhfvkdcpe reeiekfqnv rsssvttrgr pqrnvgigts
      121 grgvtkdttv rsevgapara yairareeas spdvitelka rplflqeice aqkvdnelqr
      181 rktqcavdnn sdfqidldgc liglsivftt gigkns
//
LOCUS       XP_040944277             179 aa            linear   PLN 06-AUG-2024
DEFINITION  calcineurin subunit B-like [Gossypium hirsutum].
ACCESSION   XP_040944277
VERSION     XP_040944277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088343.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 46% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="calcineurin subunit B-like"
                     /calculated_mol_wt=20257
     Region          102..161
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(111,113,115,122,145,147,149,156)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..179
                     /gene="LOC107907904"
                     /coded_by="XM_041088343.1:1..540"
                     /db_xref="GeneID:107907904"
ORIGIN      
        1 mnqdssmlmd siayfesvlr qnlyvgtvcg ltchldedly ygtwgvvyse fcydstdslv
       61 vdfgqgilkf glwfylsiss fnvygefiaa tvhpnklere ehlvaafryf dkdgsgyitv
      121 delqqacveh nmtdvlledi irevdqdndg ridygefvam vlifslladc tadpeydds
//
LOCUS       XP_016690694             359 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein EIX2 [Gossypium hirsutum].
ACCESSION   XP_016690694
VERSION     XP_016690694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835205.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..359
                     /product="receptor-like protein EIX2"
                     /calculated_mol_wt=39775
     Region          1..>359
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          19..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..91
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          193..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          293..320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..359
                     /gene="LOC107907901"
                     /coded_by="XM_016835205.1:1..1080"
                     /db_xref="GeneID:107907901"
ORIGIN      
        1 mnlskannwv eavnmlpslt tldlswcelq dfaesltinf tslsvldlsy nnfntaipcw
       61 lfnittlqrv nlqrseikgs lpevsrgslc nlrtldlsln aingkikgfi dalggcgnnt
      121 ldyldlssnn lqgklpdslg nlkylsilrl aqnsfsgslp rsignlsnlv mldlsfnfmn
      181 gavvesigql triatlnlyg ntwegtiten hfrnlsrlsi falssigksv vfnlnpdwvp
      241 sfslyeiais ncqlgprfpt wlrtqvdafe iilsgagisd iipvwfwnlt srlwwvdlad
      301 kqfrgklpgs vsfefdnitg awvdlgfnrl egsiplwpnv rhlslrnnlf sgpipsnig
//
LOCUS       XP_016690693             790 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690693
VERSION     XP_016690693.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835204.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690693.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..790
                     /product="uncharacterized protein"
                     /calculated_mol_wt=88303
     CDS             1..790
                     /gene="LOC107907900"
                     /coded_by="XM_016835204.2:1..2373"
                     /db_xref="GeneID:107907900"
ORIGIN      
        1 mlnyrskgnl krgllafghv vttinggdyl papnfdqgst sssrmncrrr pfytwgvsai
       61 nishkayika qalseplglm akwlltisln mvsctllclq qfwlaifffv ddcilalenv
      121 vervfppskh vfdkvdeivq tietlpgkfd dildefpvii kqvpllewgl slviswlkll
      181 tsiltrwgsr ntkekeiavd taydevingd vpvaetehne aklptqspni rhddnkklvv
      241 dttynevngd vsiartdrnk akpssesvnv rhddnkklvi gkvynevngg vsiaetkpne
      301 vklsiksldv ghydknklvv dttyneving dvlvaepedi eaklpkepfn vghddgkfvi
      361 ystynevind gvsvvetkqn eaklsreyfn vghdddgkfd idiaynevin ggisvaeteq
      421 neaqlpresf nvgqdddgkf dinaaynevm ndrvsiveme qnvaklpres lnvghddnkk
      481 fvidttynei ingdvlvsea ehnevklpte slnvrhddnq klvfdttynd vtngslsvae
      541 iekkeaklas kslnvgyddn gnfvidtscn evisdgisva eteqnevklp tesfniehdg
      601 nrklvvdtpy kevinsdili vetdhnevkl pveffnighd hneklvndta ydevtngrvs
      661 iaeteqneak lptkclnigh gdkkklavnk anykeaindg kslvetkqnk aklpikplgv
      721 glddneklqk petkaenkvg emsnrssnvk atykdvlnsk vtykqalerg arenienkkm
      781 ktmkkvgirr
//
LOCUS       XP_040944278             257 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAINTENANCE OF MERISTEMS-like [Gossypium hirsutum].
ACCESSION   XP_040944278
VERSION     XP_040944278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088344.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..257
                     /product="protein MAINTENANCE OF MERISTEMS-like"
                     /calculated_mol_wt=28680
     Region          62..>240
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..257
                     /gene="LOC121214568"
                     /coded_by="XM_041088344.1:1..774"
                     /db_xref="GeneID:121214568"
ORIGIN      
        1 marlirndeh isdatnneds frllrgrvsv lkkapdarlm pylelarfgs valirssdlr
       61 fdllsalver wrlethtfhf pcgectvtle dvalqfglpi dgspvtgvss ftdpaalcyq
      121 llgdsprdge syffgikftw lkakigqlsa tategelmcv arayimhmvg vvlmpdangd
      181 svhwmylpll adlstarsys wgsavlamly qelcrakkpn vrdiggclil lqswalyrlp
      241 flafvshqpy lyplplr
//
LOCUS       XP_016690687             215 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690687
VERSION     XP_016690687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835198.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..215
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24886
     Region          29..>81
                     /region_name="OTU"
                     /note="OTU (ovarian tumor) domain family; cl45892"
                     /db_xref="CDD:459237"
     Region          61..186
                     /region_name="OTU"
                     /note="OTU (ovarian tumor) domain family; cd22744"
                     /db_xref="CDD:438581"
     Site            order(71,122,125,132..135,160,162,181,185..186)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438581"
     CDS             1..215
                     /gene="LOC107907889"
                     /coded_by="XM_016835198.1:1..648"
                     /db_xref="GeneID:107907889"
ORIGIN      
        1 mysggsltyh rqllwkmrif vvtepseqvs nfidlnqmle scdthplmke ipdmfhpyit
       61 hvqdirgdgn cgfraisvcl cygedqwlyv rhqlldells sydvyarvft ngidelrnsl
      121 cfskcpapae hwmvmpmtgv lianrfgvil nyltkrgdit ffplwrgpeh fqyhhtitia
      181 hvydnhnvmv qlegdypmst ilaywichra pftag
//
LOCUS       XP_016692885             502 aa            linear   PLN 06-AUG-2024
DEFINITION  stemmadenine O-acetyltransferase [Gossypium hirsutum].
ACCESSION   XP_016692885
VERSION     XP_016692885.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837396.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692885.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..502
                     /product="stemmadenine O-acetyltransferase"
                     /calculated_mol_wt=55988
     Region          3..411
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..502
                     /gene="LOC107909754"
                     /coded_by="XM_016837396.2:1..1509"
                     /db_xref="GeneID:107909754"
ORIGIN      
        1 mklevevick gmikpssptp qqlrhyqlsl ldqqinsvyn hlvlfyptkt nvqthninil
       61 dlhhfklsvs qalthfypla grikgnsfvd cndegipfne aqvkcrlsdl lhdpvpdeln
      121 klypfpldda kvlpmgiqln tfdcggigia lcishkigda lsyftflntw aaiargdtkn
      181 vvlpefvsak lfpprnislp epaletsekn iatkrvvfsa skieeiraky aadherrpsr
      241 vealsayiws rfiastkkkp spnvmihtvn lrtkfeppls aqsfgnifrv aitvpsmddg
      301 snlvsqirns irkidndyvr klqagedlfe ptnqgdekge ttpfiftslc rfplydadfg
      361 wgkpvwvssa rlsaknlvvf mdtatgdgie awinlkeedm aefgsdeell atlksfssdg
      421 ydssggdsgs sgiasdvgvg tmshvdrivn vemfasptvt vfethtvvei skkkssrrpl
      481 lrslvcrwpi hrrstrcnrk ws
//
LOCUS       XP_016690681             105 aa            linear   PLN 06-AUG-2024
DEFINITION  anther-specific protein BCP1 [Gossypium hirsutum].
ACCESSION   XP_016690681
VERSION     XP_016690681.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835192.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690681.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="anther-specific protein BCP1"
                     /calculated_mol_wt=9881
     CDS             1..105
                     /gene="LOC107907881"
                     /coded_by="XM_016835192.2:1..318"
                     /db_xref="GeneID:107907881"
ORIGIN      
        1 marqsfvlal vfialvglvs aantaskaps avpvpdddti gntddgagas spgasndava
       61 aplgseqeak smapapssda tttgvsavga aaltgaaaia tyfvf
//
LOCUS       XP_016690682             216 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690682
VERSION     XP_016690682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835193.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24590
     Region          50..144
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(65,67,69,93..95,137)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            65..67
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            65
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(93..96,100..103)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..216
                     /gene="LOC107907882"
                     /coded_by="XM_016835193.2:1..651"
                     /db_xref="GeneID:107907882"
ORIGIN      
        1 mpkyakffkd vmshrkkigk gkqiifneey smvvsrkvpp kftdpssfti pieigrvsfr
       61 kalcdlkasi nlmplsiyrr lglgelqeni vtlqlvgrsl vhpkgfledv lmrdmqfifl
      121 vdfimldfek dlkisivler pflatskati dvgmgeltid iegetkifkc vkpkpksyev
      181 lpiqgnesqs crcscamqen pkvnedkkdi tilrrp
//
LOCUS       XP_016690684             161 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690684
VERSION     XP_016690684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835195.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18745
     CDS             1..161
                     /gene="LOC107907884"
                     /coded_by="XM_016835195.1:1..486"
                     /db_xref="GeneID:107907884"
ORIGIN      
        1 mapfealygr kcktpflkaa sdhqksyadl qirdlefavg drvflkvspw kkvlwfgrkg
       61 kssprfigly eiverigsva yrlalppele kihnvfhvsm lrwyksdpsh viphseielq
      121 pnmtyseeli rilarevkel wnkrvslvkm lwhrhgseea t
//
LOCUS       XP_016690685             248 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690685
VERSION     XP_016690685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835196.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..248
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29144
     Region          52..145
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     CDS             1..248
                     /gene="LOC107907885"
                     /coded_by="XM_016835196.1:1..747"
                     /db_xref="GeneID:107907885"
ORIGIN      
        1 mffgykvrkc rakefrgrpd ddpvkaeywl qntirvfeei vcslddylrc dvsllkeeay
       61 nwwstivavv pkekitwkff qsefkkkyvg kwkldkkkre flnlcqgnrs vakyerefvy
      121 lskyaweivp teeeiciwfe egmndetkmm iegtgirefv ifsdpaqkme evynkkmqrd
      181 rqnkesykrg ssksfsalpa kkskddfnla tsmserlnkn kvtqpgygvs irpatsvgsv
      241 qnahkpkc
//
LOCUS       XP_040944279             180 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944279
VERSION     XP_040944279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088345.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..180
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21149
     CDS             1..180
                     /gene="LOC121214570"
                     /coded_by="XM_041088345.1:1..543"
                     /db_xref="GeneID:121214570"
ORIGIN      
        1 mkkngmlrkt ledcqlydvg fegswftwer gnlpetnire rldrgvanmg witlflevka
       61 qylihsfsnh cpllidttkn rvkvqnsnfk fkawwlmees fievvkgiwe kssgellqrl
      121 eilkiglkmw ageiqktrkk tkqaltkkle elveverdde nlaelietii nlnfeiekek
//
LOCUS       XP_016690677             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690677
VERSION     XP_016690677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835188.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12161
     CDS             1..105
                     /gene="LOC107907877"
                     /coded_by="XM_016835188.1:1..318"
                     /db_xref="GeneID:107907877"
ORIGIN      
        1 madalatlas minvnkqedv kpiqmsiyev pahcyninde eekdgypwyh dilryvknre
       61 ypgqatenek rtlrrlandy vlngeilyrr gkdqvllrcv dvvea
//
LOCUS       XP_016690676             166 aa            linear   PLN 06-AUG-2024
DEFINITION  secreted RxLR effector protein 161-like [Gossypium hirsutum].
ACCESSION   XP_016690676
VERSION     XP_016690676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835187.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="secreted RxLR effector protein 161-like"
                     /calculated_mol_wt=18675
     Region          38..>144
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(42..45,80..82,85,119)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..166
                     /gene="LOC107907876"
                     /coded_by="XM_016835187.1:1..501"
                     /db_xref="GeneID:107907876"
ORIGIN      
        1 mhkpldthfk aikrilrylq gtldyglqft rnskfllkgy sdaswgsnvd drrstsgfcv
       61 flggnlisws skkqqvvsrs taeaeyqsla hvtaeiswir slltelgvwi pskalvwcds
      121 saaiaiannp vmhskfkhve ldffckrkgg ewvaaswsyf rtgsny
//
LOCUS       XP_016690671             265 aa            linear   PLN 06-AUG-2024
DEFINITION  tropomyosin-like [Gossypium hirsutum].
ACCESSION   XP_016690671
VERSION     XP_016690671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835182.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..265
                     /product="tropomyosin-like"
                     /calculated_mol_wt=31383
     Region          21..>201
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..265
                     /gene="LOC107907872"
                     /coded_by="XM_016835182.1:1..798"
                     /db_xref="GeneID:107907872"
ORIGIN      
        1 mkrlavgsmt tpeydewrrk rnndnipeln mesvrpmeey lqvipselei ikqdfekrnl
       61 elekkierle eekmhlrldv dvqkleaekl kkgknkvqed lnslktdykr lrketlerqv
      121 lesqnyqadl kariaeleks lavyrsrnsv velrtslcki kelakrieel eytlqgcrqr
      181 ieflegnevr wreklhhsqn qiqnmdyimg raigqvreva dhlqtmgiqa dvlsvkyele
      241 sdrgqelasl lkevralsir akryl
//
LOCUS       XP_040944280             239 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944280
VERSION     XP_040944280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088346.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..239
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26989
     Region          97..218
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(98..101,135..136,139,163,202,216)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..239
                     /gene="LOC121214571"
                     /coded_by="XM_041088346.1:1..720"
                     /db_xref="GeneID:121214571"
ORIGIN      
        1 mtwvteyasq niwswltwvf dkgtkeqtrl fccalwvlwg srnqmihekk ailgldlsqk
       61 iqsylreleg srgsrisyas teatgqdrdt sreiiqfdaa fdirnfrsas giivrdqdgv
      121 iralkstlhf nisspfvaea yacleatklg ismgidsvti mgdpktvihk cqsttrdksv
      181 igmiihdiqs nrshfqkiaf rfiqrtengq ahtlakdalt kgeevylivp kerqaqnpv
//
LOCUS       XP_040944281             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944281
VERSION     XP_040944281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088347.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18586
     CDS             1..156
                     /gene="LOC121214572"
                     /coded_by="XM_041088347.1:1..471"
                     /db_xref="GeneID:121214572"
ORIGIN      
        1 memfretlef cqltdvgysg rwftwergnl pktciqerld kgvanenwis mfpmvkvqhl
       61 vhsfsdhcpl lintakedkr rpkshfkfea wwiledsfld eakhiwetts rsflqklesl
      121 ragledwarr vrkrkqgkkd llstkllklm eeekgr
//
LOCUS       XP_016690669             415 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ESR2 [Gossypium hirsutum].
ACCESSION   XP_016690669
VERSION     XP_016690669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835180.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..415
                     /product="ethylene-responsive transcription factor ESR2"
                     /calculated_mol_wt=45346
     Region          63..131
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(65..66,68,70,72,74,78,80,87,89,92)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..415
                     /gene="LOC107907869"
                     /coded_by="XM_016835180.1:1..1248"
                     /db_xref="GeneID:107907869"
ORIGIN      
        1 meeafktlsg itfvpdpdpr dsiadhpnkc aastttavtp ttsntptnkr slkenggsgg
       61 tmryrgvrrr pwgryaaeir dprskerrwl gtfdtaeeaa caydcaaram rgikartnfv
      121 ypatephsay dhflppfsfs kqsqssirdl ncirhqfgqs snwppfasph agdfsgggss
      181 tqrnaslnmi lfrdllnsss nsslhvpphq slpdhfsftn gtcassfpft fssnssvlpg
      241 gsllnssinn tsprasdsis dsftgstmtl plkesnssha tvtpttddme ffpqepsdsg
      301 llqeviqrfl pkpsskkqdv satttnctyh sisppvnemt lgqslsglkk eplgfyvdyn
      361 nqavpqqfes fnrttavhya neipakhlqv gqdmlddifq ypelmsvlaa rvqng
//
LOCUS       XP_016690668             272 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690668
VERSION     XP_016690668.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835179.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690668.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..272
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30620
     Region          52..145
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     Region          239..265
                     /region_name="ZnF_PMZ"
                     /note="plant mutator transposase zinc finger; smart00575"
                     /db_xref="CDD:128845"
     CDS             1..272
                     /gene="LOC107907868"
                     /coded_by="XM_016835179.2:1..819"
                     /db_xref="GeneID:107907868"
ORIGIN      
        1 mvnrrevanv vtsivtslid dnfnkseekm fetnvpgsda ckdgyrvgcr rivgldgcfl
       61 kgyyggylla aigidanngi ypiayaaves enqaswfwil ellaldleiv ssyqisfmsd
      121 kqkglleaiy ilipnaetrr cvrhlhvnfk kasfrtkelk dllwkvakas tprdfedvmd
      181 elkktnqhmi leakgksilt mmetvrtkim cvsshvggnr yqvecspssq hmvdlvensc
      241 scrnwdltgi pcmhalavih lkdefletyv qt
//
LOCUS       XP_016690980             655 aa            linear   PLN 06-AUG-2024
DEFINITION  lysM domain receptor-like kinase 3 [Gossypium hirsutum].
ACCESSION   XP_016690980
VERSION     XP_016690980.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835491.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690980.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..655
                     /product="lysM domain receptor-like kinase 3"
                     /calculated_mol_wt=72856
     Region          <148..235
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          <194..248
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          357..630
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(357..360,363,365,376,404,420..423,474,478..479,481,
                     491..492)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..655
                     /gene="LOC107908263"
                     /coded_by="XM_016835491.2:1..1968"
                     /db_xref="GeneID:107908263"
ORIGIN      
        1 msqqtcadrn knkdrnssss ifmvsstlls slqkqekesp mlitmvslsh hllacltlpl
       61 lvtllvrick addmypfpcs qeiqkcdall yhtntgldev eiasyysvdp stfrpishgn
      121 nkdylipvpc scgdtdngtq ayfydvyytv kegdtfrnvs arfyngqale vggeennfpt
      181 gskvtmhlic gclesqsttv vtytvqqgds lssmatqlst sindiqslnr nltsnpdfin
      241 sgwvlyvpma kdripavpkr kggikwtiii vilsavtlfs mialliilvr rkaqqmseed
      301 pkpvsksisa rafslqnsfl ykdniedvta fesdrpmiys leeieeatdn fdetkkigtg
      361 gygyvyhgil gakevavkkm ksskskeffa elkvlckvhh invvellgfa sgddhlylvy
      421 eyvqngslnd hlhepllkgh qplswtaraq ialdaakgie yihdhtkary vhrdiktsni
      481 lldkglrakv adfglaklve rtneedllat rlvgtpgylp pesvmelqvt pktdvfafgv
      541 vlaelitgqr alvrdnkepn kmrslitvvn nvfeeenpes aleevidgsl rgsypmedvy
      601 kmaelaewcl sdeavnrpem rdvvltlski vmssveweas lggssqvfsg vfngr
//
LOCUS       XP_040944282             304 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944282
VERSION     XP_040944282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088348.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..304
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35008
     Region          117..>161
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
     CDS             1..304
                     /gene="LOC121214574"
                     /coded_by="XM_041088348.1:1..915"
                     /db_xref="GeneID:121214574"
ORIGIN      
        1 maiqeddrvn iqrvpiaaql ylyqknqpkk kdriswavgv tlgqnaykkp keealrrger
       61 eskatikerf karhviksye rfsesdsvvi eniedalpqi rdhslatkql egqqkdkerl
      121 tvvvccngdg snkvpfwviv hfinvswnid vkpttiaisf rhcnirseed ipleqeigdv
      181 kvihklkkvi sdlhyrnamd idqilnypse neslmesptn eeiiqgvmdv stddeqdldy
      241 ssllphvspk eaflavdtlk nyliqhenni pylvyallkv kdeiefdsht kkkqltiday
      301 fske
//
LOCUS       XP_040944283             566 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At5g18500 [Gossypium
            hirsutum].
ACCESSION   XP_040944283
VERSION     XP_040944283.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088349.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..566
                     /product="probable receptor-like protein kinase At5g18500"
                     /calculated_mol_wt=62928
     Region          287..547
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(287..290,293,295,307,309,336,352..355,402,406..407,
                     409,419..420)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..566
                     /gene="LOC107907851"
                     /coded_by="XM_041088349.1:257..1957"
                     /db_xref="GeneID:107907851"
ORIGIN      
        1 mgmdlafpfm nvfvlfatld fafslgsvgn cildiknpsp ttepncelgn wggfinsscc
       61 ggafeqylla lgrrasltna iylnstqqsn cltamasfek dvygcgiqkl tsgasscsdy
      121 titdvidklg drfrnfqedc kvlgtgrgve hlcnsclrrw eeingssdyk qqpasedddd
      181 icrfaalvsm isnrvedenw vyavfqclrg safsldeheg tangnihkrg nlnnnhqqse
      241 fqitnrhcss sssystesdf sknagsqkis ikelysatny fnasnfigqg iagkvykgll
      301 sngqyvaikh iindgqietf vrevrslshi khpnlvalvg ycenedecfl vyelchhgnl
      361 sewlygkdkg lswiqrlkia idsarglwfl htypegsivh rdikptnili ndkfqaklad
      421 fglskvmdig qshvssevrg tfgyvdpeyr rnhrvnvsgd vysfgivllq llsgqrvlnm
      481 nlhrplplsk makvltrdgd ttkfadpkln geysleafdl vlklalscig ikqerpsmeq
      541 vvlrlqkaln isiqakpvas rgkiiy
//
LOCUS       XP_040944284             256 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944284
VERSION     XP_040944284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088350.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29783
     Region          98..192
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     CDS             1..256
                     /gene="LOC107907856"
                     /coded_by="XM_041088350.1:1..771"
                     /db_xref="GeneID:107907856"
ORIGIN      
        1 msnehvedvd qemyirdrel detesatpsv nplgnqpnie renvrdrdns hllriiadal
       61 qrvagtgidp sttenwmest krvlqqlect rreslicavs llqgeaylww esvirhlpte
      121 qvtwdlfqke fqkkyvgely iedkrqeflm lkqgnlsvvd yerefsrlsr yasefiptea
      181 dsckrflrgl rdeirvqlas hritefidlv erakmveqvl gldkkpeiar stgkrasiti
      241 snplpkrsre srggwr
//
LOCUS       XP_016690658             326 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690658
VERSION     XP_016690658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835169.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36534
     Region          251..326
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(266,268,270,294..296)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            266..268
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            266
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(294..297,301..304)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..326
                     /gene="LOC107907857"
                     /coded_by="XM_016835169.1:1..981"
                     /db_xref="GeneID:107907857"
ORIGIN      
        1 mmkmisdqkk etdgrfqale tavkqlhtrv sstdvnlgdl qaqvnnrlps qsvanprdnv
       61 savtlqsgke lrpilkkvqn skeesetevk rvrfgnrtee nlampkadsq ssqadprkae
      121 kmhlpqstvs rdaaslerea ltfepqiegs lhvndqqrsy epkasfpqrl rkeksddvna
      181 eiletfrkvq vniplidaik qvlryakflk elctskrkli gnekislgen vsavfqkklp
      241 ikckdlgmfs ilckigdlkl dramldlgas invmprsiyd rvqlgalkdi gliiqladrs
      301 naypdgvled vlvqvnelvf padfyv
//
LOCUS       XP_040944285             309 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At5g40210 [Gossypium hirsutum].
ACCESSION   XP_040944285
VERSION     XP_040944285.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088351.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="WAT1-related protein At5g40210"
                     /calculated_mol_wt=34204
     Region          1..302
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..309
                     /gene="LOC121214576"
                     /coded_by="XM_041088351.1:1..930"
                     /db_xref="GeneID:121214576"
ORIGIN      
        1 mvateflevg lntvnkaamn kglsdfvlvf ysnvlgifml apciiifyrk rsppvltwst
       61 ickifllgvl slhfhllhhl sdgkaglrdq kqpsqvfrnf gidhgafvvt lykglpltts
      121 prkysflhqv lgiphsnwii ggfflashsv ifaiilnvqt wiirrypaem lvtlicsiiv
      181 ailssvvslm vekdpnawki gfnmeliatv ytaafavafr svvhkwalrk kgpiyvsmfk
      241 plemvialam giaflgdkly lgsllgaaii aigfyaviwg qaqeekmvhd aqssnkdpll
      301 pntthtlvv
//
LOCUS       XP_016690659             405 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690659
VERSION     XP_016690659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835170.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..405
                     /product="uncharacterized protein"
                     /calculated_mol_wt=46794
     CDS             1..405
                     /gene="LOC107907858"
                     /coded_by="XM_016835170.1:1..1218"
                     /db_xref="GeneID:107907858"
ORIGIN      
        1 mengfldkve dnaaicvwsk ktqsgkgdsl aggytselwn ytrisvtqns lqeltviwdh
       61 wndeteqlfn ssfgdltyll dikvderlvr aiaqfwnpgy dcftfgrvdl vptieeytal
      121 lrcpkiqvdk vysravnvpt fvkklmnitg iseqwvtari kqkgeskcip wknlqelilg
      181 hpdarkkvdv falsiyglvi fpkalghvde atsdlfdrld krvtpvpvil aetfrslnac
      241 rrtgegrfig cvqlllawfh shfwkidkvs yrvlsenysp lkevattlrr ddiseekwlv
      301 ilqnireedi ewrapwllpd eilyrfrnfd wvlllgiwga vgyaplmvlr qygsrqfipa
      361 tqglaefeys ykdngykkki qkitnawdqt rrmkrlavgp mttpe
//
LOCUS       XP_016690660             458 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690660
VERSION     XP_016690660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835171.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..458
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51355
     CDS             1..458
                     /gene="LOC107907859"
                     /coded_by="XM_016835171.1:1..1377"
                     /db_xref="GeneID:107907859"
ORIGIN      
        1 maelthlltg rvdkgkglma nprkgsaaks fsdivmngem ienairsgki daeesnrrkv
       61 tanqsgssrq esrtrqstek lqftpivmsy kepyqrlfda hvvashylkp lqlpypnwyd
      121 asaqcdyhvg tmghsienci afkklvekli gmgvvkldds pnaedplpnh nevnmmsgnm
      181 grnvktnvve kenycefhqe igheiqdcte fktlvqgmid nketefyeev qeeenicalk
      241 ltagvpkany pvviisrpkn seartcitpk iiiqklatfp ykdrketsaa mvegdqeptk
      301 egsstekqkr ekaivpepli nepiqeeeak eflkflkhse ysvveqlhkq pvrisvlall
      361 lsseahrsal mkvlnetyva ndisvnkldr lvnnisadnf iffnddeipp ggrgstkalh
      421 ittrckgytl prvlidngsa lnvlplstld klpwiahi
//
LOCUS       XP_040944286             696 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944286
VERSION     XP_040944286.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088352.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..696
                     /product="uncharacterized protein"
                     /calculated_mol_wt=77143
     Region          96..>118
                     /region_name="Cauli_VI"
                     /note="Caulimovirus viroplasmin; pfam01693"
                     /db_xref="CDD:460297"
     Region          238..363
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(243..246,278..280,283,307,347,361)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     Region          552..672
                     /region_name="YuxK"
                     /note="Predicted thiol-disulfide oxidoreductase YuxK, DCC
                     family [General function prediction only]; COG3011"
                     /db_xref="CDD:442248"
     CDS             1..696
                     /gene="LOC107909624"
                     /coded_by="XM_041088352.1:418..2508"
                     /db_xref="GeneID:107909624"
ORIGIN      
        1 mnclphvray gsalfrkagn fiattslnqc hvplwrrnle hagvktvdle flltrfrtqc
       61 yssrksksss stkkasrtkk vhpeqppvme nekdaffvvr kgdtvgvfks fadcqaqvgs
      121 sicdppvsvy kgysltkete iylsscglkn alytiraadv kedlfgalip cpfqepassk
      181 getshndatk krpqdmlqse ygglgslgsi avadpvrkhf kldphaeaqi tssghqscil
      241 efdgaskgnp gpagaaavlk tdsgnvickl reglgiatnn aaeyraiilg lkhalrkgyt
      301 nirvrgdskl vcmqlqglwk vkhehmsely eqamklkdkf lsfqinhvlr elngeadaea
      361 nlavklaegq iqeeckilhl npkrscycwp sssalqrnfs fvcgrgmlmg neirsilifg
      421 wagandaqpt fswfplypta ntsllshadl eakkatmypa qlkyepfsit eimamlmkri
      481 anltkttakp sppfslkyll lfslpslssa sekllagtat dvadisgesd lvysdppvsa
      541 tikpllpdll qprvviydgv chlchrgvks vikadkhrki kfccvqskaa epylrvcgvd
      601 redvlrrfvf ieglglyhqg staalrvlsy lplpysalsa fliiptplrd avydfiakrr
      661 ydwfgksedc lvlqeselle rfidreemmd rnrsnl
//
LOCUS       XP_040944287             113 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial outer membrane protein porin of 36 kDa-like
            [Gossypium hirsutum].
ACCESSION   XP_040944287
VERSION     XP_040944287.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..113
                     /product="mitochondrial outer membrane protein porin of 36
                     kDa-like"
                     /calculated_mol_wt=12352
     Region          <13..106
                     /region_name="Porin_3"
                     /note="Eukaryotic porin; pfam01459"
                     /db_xref="CDD:460220"
     CDS             1..113
                     /gene="LOC121214577"
                     /coded_by="XM_041088353.1:1..342"
                     /db_xref="GeneID:121214577"
ORIGIN      
        1 mqtllllwlc mwnekgnsin asyyhivnps tntvvgvevt hsfstnvnti tvgtqhaldp
       61 ltttkarvnh agkastliqh kwrpkslfti srevdtksld kspkvglala lkp
//
LOCUS       XP_016690650             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690650
VERSION     XP_016690650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835161.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13578
     Region          12..101
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..119
                     /gene="LOC107907849"
                     /coded_by="XM_016835161.1:1..360"
                     /db_xref="GeneID:107907849"
ORIGIN      
        1 msiieegnwv ilntdgavkl nsklatarev lkdrngawil gfnrslgcys qeafraiqes
       61 ffttsssafi qhiqqnlldi gqwkleyipr emnfevdyit kiafdrnkdl hlvediplv
//
LOCUS       XP_016690649             276 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog [Gossypium
            hirsutum].
ACCESSION   XP_016690649
VERSION     XP_016690649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835160.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /calculated_mol_wt=31653
     Region          7..276
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..276
                     /gene="LOC107907848"
                     /coded_by="XM_016835160.1:1..831"
                     /db_xref="GeneID:107907848"
ORIGIN      
        1 msdlkcdlit alverwrlet ytfhlscgvc titledialq lefpidnivv tgfstlsdpe
       61 tlcydllgrs pgdgddeltt lrfswlnttf eylpstater evmcvvrayi mhkiggvlml
      121 dannnkvhli ylsplsdlya trsyswgstv lgtlyrelcr mtkcravdid gclvllqswa
      181 lyrmpflvsv tlqtygfqlv nrwsfslgne rsytlliyrq mietyagerf awmsysfldi
      241 vaivpystyi hshlwcinap llnfstiewy ngdrvl
//
LOCUS       XP_016690648             943 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690648
VERSION     XP_016690648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835159.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..943
                     /product="uncharacterized protein"
                     /calculated_mol_wt=108606
     Region          1..117
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     Region          208..273
                     /region_name="gag_pre-integrs"
                     /note="GAG-pre-integrase domain; pfam13976"
                     /db_xref="CDD:372857"
     Region          <307..402
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          570..784
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          <844..917
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     CDS             1..943
                     /gene="LOC107944102"
                     /coded_by="XM_016835159.2:1..2832"
                     /db_xref="GeneID:107944102"
ORIGIN      
        1 mslksakeiw dyhkaeykgd erirglkvln lirdfelqkm kesesvkeys drllsiankv
       61 rllgselnns riveklliti sekfeatitt lentkdlski slaellnalq aqeqrrsmrk
      121 sseswlidsg ctnhmtydke lfeelrntev krvrigndvl fvpkidqnll svgqlldkgy
      181 kvlfhnkqcl ikdangkglf nvkmkgkifa lnpmeneqmt fksrvsatet whkrlghihh
      241 rgllqmqmkn lvegltdidd dlphcrackf geqhrqpfpk qawraskklq lvftdlcgpq
      301 rtpslngnly yiafiddltr mcwifllkkk levagvfwkf karvengsgc miqilrsdng
      361 keytsetfnr fceeagiehq ltapytpqqn gvserrnrli memtrcmlhe knlpkgfwge
      421 vantavflqn ristkavkdq tpfeawygyk pslkflrvfg clcftcipqv krdkldkkae
      481 agifvgystv skayrvfqph tgrvivsrdi yfveneqwnw egstktnqty sapnhftign
      541 tleeledegq dvladdapvk ggafddrekk twelvdrpld rkiigvrwvf rtklnpdgsv
      601 nkfkarlvlk gyaqvfrvdy setfalvvrl ntvrllfalt aqknwkvfqd nedkvyllkk
      661 alyglkqapr awnsriddhl vglgfqksqf eltlyvkheg tntlvisvyv ddllitgsni
      721 dqvnqfklem kkvfemtdlg lmsyfldiei kqnqnevfic qrkyakeilr kfhmedckam
      781 stpmnqkekl ikddgsakvi eaefrslvgc lmylaatrpd ilndvsilsr fmhcpnethm
      841 rdakhvllel eekqsteilv dnqaaiaisn npvfygktky fniklffvre vqksgdvslc
      901 ycksedqiad iftkplhlas lkasgrnlef aaskqggvlr scv
//
LOCUS       XP_040944288             372 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944288
VERSION     XP_040944288.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088354.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..372
                     /product="uncharacterized protein"
                     /calculated_mol_wt=41908
     Region          125..221
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(140,142,144,168..170,215)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            140..142
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            140
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(168..171,175..178)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..372
                     /gene="LOC121214578"
                     /coded_by="XM_041088354.1:1..1119"
                     /db_xref="GeneID:121214578"
ORIGIN      
        1 mavnrlesqg klpsqtepnp rqnasaitfr srkvletvpd krrlakdkke keekeiletf
       61 rkvevnipll daikkiprya kflkelctsk mrlignervn vgenasavlq kkvppkykdq
      121 cmfsisceig nvgikkamcd lgasinvmpy piyklinagp lkktgviiql adrsviypeg
      181 lledvlvkvn elvfptdfyi inmeddnstn ssdillrrpf lstasakidv qsgtltmefd
      241 gdivkfnaye amshpnslsn issidsidcl tqnyseyhdf deletvfyrs idmdvlsrle
      301 elaviedplr eivkhletqp sltnqgnqfe llpsqtkmlp silqpptlel kalpdhlkyi
      361 flgekdalpv iv
//
LOCUS       XP_040944289             347 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized mitochondrial protein AtMg00810-like [Gossypium
            hirsutum].
ACCESSION   XP_040944289
VERSION     XP_040944289.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="uncharacterized mitochondrial protein
                     AtMg00810-like"
                     /calculated_mol_wt=38812
     Region          <1..92
                     /region_name="RVT_2"
                     /note="Reverse transcriptase (RNA-dependent DNA
                     polymerase); pfam07727"
                     /db_xref="CDD:400190"
     Region          184..321
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(188..191,226..228,231,265,291,318)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..347
                     /gene="LOC121214579"
                     /coded_by="XM_041088355.1:1..1044"
                     /db_xref="GeneID:121214579"
ORIGIN      
        1 mkfevskadn slfilrsesr lvyvlvyvdd iiitgndaka igdfvtqlna kfslkdlgkl
       61 nyflgievny iaqgifltqk kyildllqra smdslptsmv ttcrlsatts spvedehyyr
      121 sivgalqyvv itrpdiaysv nkvcqfmhkp lnvhfkavkr ilrylqgtln yglrfirsss
      181 fllegyseas wgsdvddrrs tsgfcvflgg npiswssrkq qviprsitea eyrsvahlta
      241 elvwirslli elcvpipkrs liwcdssiav aiagnlvlhs kfkhveidlf fvrekvadgv
      301 lqvghisgsd qiadvltksl svgiftkfrd qlcvadmsqe vlgakrs
//
LOCUS       XP_016690643             430 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690643
VERSION     XP_016690643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835154.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..430
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48144
     Region          239..>304
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(270,272,274,299..301)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            270..272
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            270
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     CDS             1..430
                     /gene="LOC107907842"
                     /coded_by="XM_016835154.1:1..1293"
                     /db_xref="GeneID:107907842"
ORIGIN      
        1 mpnletseti gtptgkaesq tltvgddalp qamiralkrv vgthsrsrwl ggvigvasti
       61 aeywleateh imtdldctst qklrdvvslf rdeayqwwlt veqgvqleqr erifavlvnk
      121 akiveevkct krkwrdrekd qnkikrdssp sgssqrlkkr mrfdrplrad apvvvteiql
      181 ylvlvtaral apnyvrppke vqqpfrgcgt drdgnrfgrg qrapgrgagq aeacqpalvy
      241 aarfleesnd anviagtffi hsvpyyalid igsthsyias vifvnlglta qntarefsvi
      301 spldclieyl vnldyttkrv tlksnendkv vmvgerrdyl snlistvvae klapkvceay
      361 layvfdyift khsvgdirtv kefpdvflee lprvppdrei efgivllpgt apvsiahycm
      421 apkeltelka
//
LOCUS       XP_040944290             104 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 28 [Gossypium hirsutum].
ACCESSION   XP_040944290
VERSION     XP_040944290.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088356.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..104
                     /product="MLP-like protein 28"
                     /calculated_mol_wt=11581
     Region          5..>104
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..104
                     /gene="LOC107907841"
                     /coded_by="XM_041088356.1:1..315"
                     /db_xref="GeneID:107907841"
ORIGIN      
        1 masstlignl evdveikasp eqfremfahk lhhvhhtcyd kvqgcdlhkd ekaknakvie
       61 eavdsnknlv tfkmiegdlm keykssivti qvspkcegng simh
//
LOCUS       XP_016690641             228 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690641
VERSION     XP_016690641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835152.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..228
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25686
     Region          2..107
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     CDS             1..228
                     /gene="LOC107907840"
                     /coded_by="XM_016835152.1:1..687"
                     /db_xref="GeneID:107907840"
ORIGIN      
        1 mtvvikllgr nigflslqdk isnlwrpsmp fhllgiengy flfkfhsked ydkvlsqgpw
       61 ivfgqyltvq swskdfdpei geltgkvvrl dfntdsrarg nfarmavfin ldkplvsqil
      121 ingvpqriey eslsivcfay grydhgkdlc pptktdtvke geqivatgng nnaivletvg
      181 getesanfgp wmlvekksrr nprergfgae ikgnnfsepr yiilnyan
//
LOCUS       XP_040944291             291 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944291
VERSION     XP_040944291.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088357.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..291
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32005
     CDS             1..291
                     /gene="LOC121214580"
                     /coded_by="XM_041088357.1:1..876"
                     /db_xref="GeneID:121214580"
ORIGIN      
        1 mdkkwkrwii irgaalqask srdgkwptpf siktlanlgl gsskghfngh slngdghgll
       61 skaqgkipmq sigskvtstp gsieilgdhm dgiknvglen rnfqwrivcc fpkihqfrlc
      121 pmeknpqrqp liilmmvfff nsvipnanss hnttksnygn gavsvgrpss fpvggnsgrk
      181 vddsrrgkkl nkifrypgrn fkvssssrvp ltksvnsmad lisaqlvset gkgqprvlle
      241 asvtmeqdkq lgktwnlfct mkscfrsksl daigcnlaiv ivetffeidl f
//
LOCUS       XP_016692634             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692634
VERSION     XP_016692634.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837145.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692634.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30610
     CDS             1..274
                     /gene="LOC107909564"
                     /coded_by="XM_016837145.2:1..825"
                     /db_xref="GeneID:107909564"
ORIGIN      
        1 mgalilalla slstiinrlk ilvirfrrnh slpsrpllyd tdfdtdsets scsssdneve
       61 yeepsasqnw rqvdedfrvr gsghfiddqw rnsgstlrkr rssigdlfsw aeeltngksv
      121 vklwdnlglg frldldessn flnvydinke tkirsifgek sdfqavsass sspavvvsag
      181 gdsstrrvav sawdtrldcr qpviltewsp ekpmekisav ntdgvekvyi rgdvkrmltv
      241 gdmrkasspl rnltdsevet wwdadavivs desm
//
LOCUS       XP_040944292             224 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944292
VERSION     XP_040944292.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088358.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25715
     Region          <2..49
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..224
                     /gene="LOC121214581"
                     /coded_by="XM_041088358.1:1..675"
                     /db_xref="GeneID:121214581"
ORIGIN      
        1 mdhlkymmes ttlngimarw killfefdil yvnqkevkes aiadflasra ledyeplnfd
       61 fpnedliyrm qdqgtggirg lrssnlstqr lnshnsscpf nlkspsrrid nqklsivtlk
      121 salfwnhlsi splsgfslvl srcrfllefl qlqglfrpdl lpllcnllfl spqmahtatq
      181 kirrwatehc ektqgtleed vpwiqsqnrt edtlkyslav llad
//
LOCUS       XP_016690640             432 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690640
VERSION     XP_016690640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835151.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..432
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49494
     Region          <325..387
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     CDS             1..432
                     /gene="LOC107907838"
                     /coded_by="XM_016835151.1:1..1299"
                     /db_xref="GeneID:107907838"
ORIGIN      
        1 mellirvvtg vtpivaeywl edterimndi dcapeeklkg avsllrdegd rsmteyeaey
       61 lrlsryargm vaseyekcvc fedglrdslr vliapqrehe fsvlmdqaki aeevkrmvps
      121 grvleddrgl sefsnhlgam drlgvvmvwv egiehwadvl irrrrgnlhw sllldaerie
      181 mhlmssplve hrvsldcatn riilrteddk evvvidecrd ylsnvisalm veklvrkgce
      241 vymnfasvsv skdssvgnir tvkeflnvfs kelpglplsr evecgiellp gtapvsivsy
      301 rmapkeliel kaqlhelldr gficlspdld qfiivfindi lvysktddeh dehirlvlqm
      361 lrekqlyakl nkckfwlrev tflghmvsak girvdprkie tvlywkqpkn tdaqqssfek
      421 lksvltpapi li
//
LOCUS       XP_016690635             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690635
VERSION     XP_016690635.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835146.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690635.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..258
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29686
     Region          26..150
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(31..34,64..66,69,93,133,147)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..258
                     /gene="LOC107907833"
                     /coded_by="XM_016835146.2:1..777"
                     /db_xref="GeneID:107907833"
ORIGIN      
        1 mdfdfpnedl myvanaeenp qenhswrlnf dgalnvlgng igavlvspng dyhpftskld
       61 fdytnnmaey eacimgirva ieqkiktlgv ygnsalvvyq lrgewetrdp klicyrrlil
      121 dlieefdnmt fhylpqeenq madalatlas mievnklenm kpiqisiyei pahcysieev
      181 endnrpwyqd illyvknyey pdqatkndkr tlrrtstgai pfslvygiea vlpieveips
      241 lrvlaelkfd eaewlqsh
//
LOCUS       XP_016690634             413 aa            linear   PLN 06-AUG-2024
DEFINITION  palmitoyl-acyl carrier protein thioesterase, chloroplastic-like
            [Gossypium hirsutum].
ACCESSION   XP_016690634
VERSION     XP_016690634.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835145.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690634.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..413
                     /product="palmitoyl-acyl carrier protein thioesterase,
                     chloroplastic-like"
                     /calculated_mol_wt=46956
     Region          <99..408
                     /region_name="PLN02370"
                     /note="acyl-ACP thioesterase"
                     /db_xref="CDD:215210"
     CDS             1..413
                     /gene="LOC107907832"
                     /coded_by="XM_016835145.2:1..1242"
                     /db_xref="GeneID:107907832"
ORIGIN      
        1 mpwtfvdyge elrlvsqlsi qisllsssce cldqsldlil hrvnnrikik inatsstkvk
       61 tlneiagagk gssslatste ighlsqeqir qriptkkqlv dpyrqgliie rgvgyrqtvv
      121 vrsyevgpyk tatlesllnl fqetalnhvw msgllsngfg athgmvrnnl iwvvsrmqvq
      181 vdhypiwgev leidtwvgas gkngmrrdwl irsqatgity aratstwvmm nektrrlskm
      241 peevrdeisp wfidkraine dvpekivkld dnaryvnsdl kpkrsdldmn hhvnnvkyvr
      301 wmletipdkf leshqlsgiv leyrrecgss drvqslcqpd edetltngve qsllknmilt
      361 pgimegngyl gpldvksygy thllqikgds kneeivrgrt rwrkklstlp yss
//
LOCUS       XP_016690626             243 aa            linear   PLN 06-AUG-2024
DEFINITION  protein E6 [Gossypium hirsutum].
ACCESSION   XP_016690626
VERSION     XP_016690626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835137.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="protein E6"
                     /calculated_mol_wt=27273
     Region          <36..>72
                     /region_name="PRK05641"
                     /note="putative acetyl-CoA carboxylase biotin carboxyl
                     carrier protein subunit; Validated"
                     /db_xref="CDD:235540"
     CDS             1..243
                     /gene="LOC107907823"
                     /coded_by="XM_016835137.1:1..732"
                     /db_xref="GeneID:107907823"
ORIGIN      
        1 masfanhivl ffflllsssv qiqareskff skifhlgaki splvvptptp apasapvlap
       61 tvapatapan igiqdpyygl yghgsgmfpp akegvttsnt ptafendlfa eeladekyes
      121 gyeknnyyyn nnnnnngytl ssynnngysg hyntngyndn ynnngyeter qgmsdtrfve
      181 ggkyyhnmkn enyypngyef ssskgtkneg yygntensne fnsmeefqnk edqymerqee
      241 yvp
//
LOCUS       XP_016690586             306 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690586
VERSION     XP_016690586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835097.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..306
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35178
     Region          6..231
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(7,36,106,137,139,197,223..224)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197310"
     Site            order(36,223)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197310"
     Site            order(106,139,224)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197310"
     CDS             1..306
                     /gene="LOC107907780"
                     /coded_by="XM_016835097.1:1..921"
                     /db_xref="GeneID:107907780"
ORIGIN      
        1 mkfmcwncrg lgnlakirel kqllvannpd liflsetkms anefqrvqnk crwqngltvn
       61 segrsgglal mwrdgmnvsi qnyskhhids mvkldnnkti rvtgfyghan pnhrssswdi
      121 lrrvgesvre ewvvggdfna ilndaekegg rkrvrgqmne fkdvmddmal vdikpdsgwf
      181 twvnnrdkgs likerldrfl tsvsvvesfp fiatkvvrqt qsdhdaiild lwgrklkayl
      241 idnrlsfkfd vcwsgdekak nivgrawnme gtdygdkier vrvalgpwqd kkygkiknei
      301 rkletd
//
LOCUS       XP_016692252             231 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692252
VERSION     XP_016692252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836763.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..231
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25717
     CDS             1..231
                     /gene="LOC107909289"
                     /coded_by="XM_016836763.2:1..696"
                     /db_xref="GeneID:107909289"
ORIGIN      
        1 mvvplgpgkf ygsslprpri ynetrfnser vnppvpvldp llswaneahw smgglsfkrl
       61 rlqgriegnv qrlkaqrdkf innkdpipkk nnsdaslspp papvavkrkr fldlndedee
      121 dvesenedne ivmnreekri lrkgavrklg ddfervakdk dsgvasggkr gfsdgigidv
      181 mkiveevnve seeikkkkkr ivkglkkgtd evqsgtgttt rasprlakrg c
//
LOCUS       XP_016690587             344 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein phosphatase 7 long form homolog [Gossypium
            hirsutum].
ACCESSION   XP_016690587
VERSION     XP_016690587.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835098.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690587.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..344
                     /product="serine/threonine-protein phosphatase 7 long form
                     homolog"
                     /calculated_mol_wt=38325
     Region          74..344
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..344
                     /gene="LOC107907781"
                     /coded_by="XM_016835098.2:1..1035"
                     /db_xref="GeneID:107907781"
ORIGIN      
        1 masvcnvstg iamaslissk shisdavnna dsyrvlkgrv svlkntpdar lmpylelarf
       61 gsvaqiryti lrfdllsalv erwhpethtf hfscgectvt ledvalqlgl pidcspvtgl
      121 saftdpdalc yqllgdspgd gesyfsgvqf twlkakygql satatkgelm caarayimhi
      181 iggeimpdas ndkvhlmylp lladlssvss yswgsavlaa lyrelcratd pkvrdiggcl
      241 sllqfwalyr mpflasvrhq pyvypllnrw sgrpgigqsy nvplyrlmie qyardgfiwt
      301 pyrtpeittv vpssayvhsy iwctsapiin fnmvewyhed rvlr
//
LOCUS       XP_016690583             363 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g16250 [Gossypium hirsutum].
ACCESSION   XP_016690583
VERSION     XP_016690583.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835094.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..363
                     /product="F-box/kelch-repeat protein At1g16250"
                     /calculated_mol_wt=40583
     Region          38..>208
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          62..121
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          125..172
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..363
                     /gene="LOC107907776"
                     /coded_by="XM_016835094.1:1..1092"
                     /db_xref="GeneID:107907776"
ORIGIN      
        1 mdsvsplpsp ssvtnyriyt sfcsndllpt pnmsnwiecy dpntnswhrv cripellqnh
       61 vrkdfamvsi gdsiyiiggr lchkapshhd pyeivqddle vlssvirydv csgvwskcap
      121 laiprfdfac tvcdnkiyva ggqctlgiar gtssaevynp tldewkplpd msvmrykcvg
      181 vtwqgkihvi ggfaekadld klpwntigrc saevynsdna kwdlvmgmwk ldvppnqiva
      241 vdeklfssgd clnawkghie eydgkfwnev egshletlss pnsvwdanwp pakriyitma
      301 aigsklffla gyrkpgetsr lmsvvhvfdt wakrdggrsl epteeegeke lcshacvvfl
      361 pnn
//
LOCUS       XP_016667495             332 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016667495
VERSION     XP_016667495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016812006.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37953
     Region          <263..321
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     CDS             1..332
                     /gene="LOC107887777"
                     /coded_by="XM_016812006.1:1..999"
                     /db_xref="GeneID:107887777"
ORIGIN      
        1 maikvdleka ydlrwdfied tlvdvgfpsn lsriimkcit tvsmqimwng klsnefsekg
       61 vlgfrqtddl giylgmplfh rqvtmntfkf vmdkvkrkln nwnakmlsma rwvtlalsvl
      121 lsipnyfmqt lkipssicve ikkiawgciw gssaanqkph llgfnlltnk qalwvkvlra
      181 kyklfedrpe dilgskcsfv wrslakvwsl lrqsllwsig dgnlikfwtd swltevglli
      241 nycldhslid esvtlqevvt rrqaelwaic eglqlawean wenvivetdc alaikgfpig
      301 arifhvapsl vdnqiwldrr fllsnpvatv ss
//
LOCUS       XP_016667494             275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016667494
VERSION     XP_016667494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016812005.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..275
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31966
     Region          66..190
                     /region_name="RNase_HI_like"
                     /note="RNAse HI family that includes archaeal, some
                     bacterial as well as plant RNase HI; cd09279"
                     /db_xref="CDD:260011"
     Site            order(71..74,104..106,109,133,173,187)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260011"
     CDS             1..275
                     /gene="LOC107887776"
                     /coded_by="XM_016812005.1:1..828"
                     /db_xref="GeneID:107887776"
ORIGIN      
        1 marwqillfe fdivyvnqka vkksaiaefl asrpledykp lnfdlpnedl mymatteeds
       61 heyhpwklnf dgasnivgng igavlvssng dhypftskld fdcinnmaey eacimgiraa
      121 ierkikilev ygdcalviyq lkgewetrdp klisyrklvl klieefdsit fyylprdenq
      181 madalatlas mikvnkskgm kpiqisiyet papyysikde enddhpwyqd ilqyvknrey
      241 pdqamendkr ilrrpvidyv lngeilykrg kdkyc
//
LOCUS       XP_040944293             213 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 [Gossypium hirsutum].
ACCESSION   XP_040944293
VERSION     XP_040944293.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088359.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..213
                     /product="agamous-like MADS-box protein AGL104"
                     /calculated_mol_wt=24645
     Region          2..>61
                     /region_name="MADS"
                     /note="MCM1, Agamous, Deficiens, and SRF (serum response
                     factor) box family of eukaryotic transcriptonal
                     regulators. Binds DNA and exists as hetero and
                     homo-dimers. Composed of 2 main subgroups: SRF-like/Type I
                     and MEF2-like (myocyte enhancer factor 2)/ Type...;
                     cl00109"
                     /db_xref="CDD:469617"
     Site            order(2..6,8,13,15,19..20,22..24,26..27,30..31,33..34,38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238067"
     Site            order(21,24,28..29,32..33,35..39,44,46,48,54,56,58)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238067"
     Site            order(29..30,33,37,53..60)
                     /site_type="other"
                     /note="protein interaction site [polypeptide binding]"
                     /db_xref="CDD:238067"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238067"
     CDS             1..213
                     /gene="LOC107887774"
                     /coded_by="XM_041088359.1:1..642"
                     /db_xref="GeneID:107887774"
ORIGIN      
        1 mgrkrllikr idnpcsrqia yskrgkgilk katelstlcg advallmfsp tgrltsythk
       61 grvmnfflfc klsprlqflv iltgyclwlq flyeslkhlk yeaeildkie rfdvplylsl
      121 slqtctfacl htqadefmit ilvslqaler kpcelnrkky eaqekmwsys pdvsniylia
      181 eaqhhqqfvt kaiqrieklk ktkllekets psl
//
LOCUS       XP_016690556             332 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690556
VERSION     XP_016690556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835067.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37164
     CDS             1..332
                     /gene="LOC107907745"
                     /coded_by="XM_016835067.1:1..999"
                     /db_xref="GeneID:107907745"
ORIGIN      
        1 mdakrggkas wvwssivagk dflkdsllwq itngenvdlw hdkwvwsiqg hklqhpgavd
       61 fdlpqkvaei inketgewdl tsvenwlnee eknailkipi gdqeeddrlv wpynsageyt
      121 arsgckqlrk mqhsvsvqar srpstsqqvs rgtwnlirnl klpskikivi wkvcskaalq
      181 ismcgeglvs ealyvisdiy iqsvisrife iceglaqskg eskakecneg ninlwrkpdy
      241 gwikinvdga sdmhshnagi gvivrvagae yskkerrtrr klvpglskle rliatipnvr
      301 fslikrsanr aavgmssfla lvlgehlvfl ac
//
LOCUS       XP_016690554             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690554
VERSION     XP_016690554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835065.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17250
     Region          8..118
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..152
                     /gene="LOC107907740"
                     /coded_by="XM_016835065.1:1..459"
                     /db_xref="GeneID:107907740"
ORIGIN      
        1 marplvirgl lgvgalirds egkwvvgchr figfttniia elwalrdglh larqlhidyl
       61 vlevdalsvi sllhnadcrn lslrylvtdc rillatfqhs rlyftsfdrc vgalakmgnn
      121 psslwnfnfr teanhlvmhl dfpffyvqic qc
//
LOCUS       XP_016690550             132 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BLISTER-like [Gossypium hirsutum].
ACCESSION   XP_016690550
VERSION     XP_016690550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="protein BLISTER-like"
                     /calculated_mol_wt=14796
     CDS             1..132
                     /gene="LOC107907737"
                     /coded_by="XM_016835061.2:1..399"
                     /db_xref="GeneID:107907737"
ORIGIN      
        1 mlcclyvdlh fillcslsgd vqivrelvtn lltvlfinvf svhclgfsnl fililqhied
       61 ltqekfslqr aleashtlae slaaensslt dsynqqrsiv nrlksdmesl qeeikaqldg
      121 aqdvvelwpa mq
//
LOCUS       XP_016729676             272 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016729676
VERSION     XP_016729676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016874187.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..272
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31096
     Region          2..78
                     /region_name="zf-RVT"
                     /note="zinc-binding in reverse transcriptase; pfam13966"
                     /db_xref="CDD:433612"
     Region          180..>272
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(182..185,219..220,223,247)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..272
                     /gene="LOC107940741"
                     /coded_by="XM_016874187.1:1..819"
                     /db_xref="GeneID:107940741"
ORIGIN      
        1 mnqliateny sklftsiwdi siptkikihl wcllkdyvph ygnlvkrrlr vksmcplcms
       61 epedshhilw ycsilrqlwv qlkiavnfda ftsdektnfv taflamdnnf kklsaislwa
      121 lwykrnkmvn eglkfelhel vgfvqsydqd lrftiakdlt tgmrqnsswq ppqtgfikln
      181 fdasfenksn csisavlard feglvmgact vpndditdaf vaearacera lyfardmgfc
      241 kvvlegdsit vikklktnai drsilspisq hi
//
LOCUS       XP_040944294             233 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAINTENANCE OF MERISTEMS-like [Gossypium hirsutum].
ACCESSION   XP_040944294
VERSION     XP_040944294.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088360.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..233
                     /product="protein MAINTENANCE OF MERISTEMS-like"
                     /calculated_mol_wt=25390
     Region          62..>232
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..233
                     /gene="LOC121214582"
                     /coded_by="XM_041088360.1:1..702"
                     /db_xref="GeneID:121214582"
ORIGIN      
        1 marvigndeh isdaannwds fqvlrgrvsv lriapdarlm pylelagfgs valirssdlh
       61 fdilsalver wrpethtfhl pcgectvtle dvalqlglpi dgspvtgvss ftdpaalcyq
      121 lledspedge syfsglkftw lkakigqlsa nasecelmca arayimhmig avlmpdangd
      181 nvhlmylpll anlstarsys wgsavlamly relcratkmk vhdiggclil lqs
//
LOCUS       XP_040944295             133 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 1-like [Gossypium hirsutum].
ACCESSION   XP_040944295
VERSION     XP_040944295.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088361.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..133
                     /product="ABC transporter G family member 1-like"
                     /calculated_mol_wt=14806
     Region          <68..>130
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..133
                     /gene="LOC121214583"
                     /coded_by="XM_041088361.1:1..402"
                     /db_xref="GeneID:121214583"
ORIGIN      
        1 mdhtagvhqv scmmfcsfkq dieqgfangi ptlevidilv ksykssdiyq maqkevaqic
       61 kqgggaleen nrqsgfftqc hvltrrsftn msrdlgyywl rlgiyislsi vlgsvfshig
      121 vdngtiqvrn mnt
//
LOCUS       XP_016690546             725 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 1 [Gossypium hirsutum].
ACCESSION   XP_016690546
VERSION     XP_016690546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835057.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..725
                     /product="phytosulfokine receptor 1"
                     /calculated_mol_wt=80049
     Region          46..81
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          66..>698
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          90..109
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          281..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..328
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          329..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          353..376
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          377..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          403..427
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          428..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..559
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          560..583
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          584..605
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..725
                     /gene="LOC107907730"
                     /coded_by="XM_016835057.1:1..2178"
                     /db_xref="GeneID:107907730"
ORIGIN      
        1 mrstttragg vllpiikfsl sagdssckkq lqqmiqgsqe pachmndlta lkgfakclep
       61 diggwnwsss nccsftgitc dnssdiygrl vglelgnkrl tgticeslvg leqlrilnls
      121 lnslhgkipa nlfhfrnlev ldlsnnylvg plpsaihlps ikyldlskny fssfismrfc
      181 tssshiqyld lahnffgegl iylenctslq yvflngngls gtfpenlfrl qhlrvlhlqq
      241 nqfsgplsyg ignlsnlvel dislndfsgs lpdvfgrlrk lesfsassnr ltgllpaslv
      301 nsasrlridl hnnsldgpir ikcsamaqvt sldlasnnfq gpvpaslssc qslralnlar
      361 tklggvvpfk frnlhaleil tlgntsinni staleilqhc knltildlgl nfyleempsn
      421 vnlqftslta liipfchlrg slpiwlsssk mlqlldlswn slggslpswi gkfeylfyld
      481 lsnnsfsgei pesltglenl vhktallkes cehislvkrk eqgrlrlvyd nictfpptid
      541 lshnkftgpi wpsfgnlknl hvlnleennl sgsipdsisg mtslevldls cnnlsgeipy
      601 slvhlsflsv fnvsynrlyg dtpsggqfmt fpdssfdgnq alcprlvapc qrkqippvvf
      661 pgkkmkimdw nfgigaaigf lltvffcfks gwvipkgree mpsnvnllrh fyilsperfs
      721 snlve
//
LOCUS       XP_040944296             688 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokine receptor 1 [Gossypium hirsutum].
ACCESSION   XP_040944296
VERSION     XP_040944296.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088362.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..688
                     /product="phytosulfokine receptor 1"
                     /calculated_mol_wt=75956
     Region          52..>684
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..336
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..362
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          389..426
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          438..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..483
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          486..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..569
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          570..591
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..688
                     /gene="LOC107908942"
                     /coded_by="XM_041088362.1:1..2067"
                     /db_xref="GeneID:107908942"
ORIGIN      
        1 mgipkvslaf vmvvimfqqm iqgsqepacy mndltaikgf akclepdigg wnwsssnccs
       61 ftgitcdnss diygrvvgle lgnkrltgti ceslvglkql rilnlslnsl hgkipanlfh
      121 frnlevldls nnylvgplps aihlpsikyl dlsknyfssf ismrlctsss hiqyldlahn
      181 ffgegliyle nctslqyvfl ngnglsgtfp enlfrlqhlr vlhlqqnqfs gplsygignl
      241 snlveldisl ndfsgslpdv fgrlrklesf sassnrltgl lpaslvnsas llriylhnns
      301 ldgpirincs amarvtsldl asnnfqgpvp aslsscqslr alnlarnklg gvvpfefrnl
      361 haleslslgn tsinnistal eilqhcknlt ilvlglnfyq eempsnvnlq ftslkaliip
      421 fchlrgslpi wlssskmlql ldlswnslgg slpswigkfe ylfyldlsnn sfsgeipesl
      481 tglenlvhkt allkessehf slvkskeqgr pylvyndvws fpptidlshn mfsgpiwpsf
      541 gnlknlhdls leennlsgsi pesisgmtsl evldlsrnnl sgeiphslar lsflsvfnvs
      601 ynrlygdtps ggqfmtfpes sfdgnqalcp rllapcqrkq ipplvspgkk mkivdwnfgi
      661 gaatgflltv ffcfksgwvf pkgrvcry
//
LOCUS       XP_040944297             121 aa            linear   PLN 06-AUG-2024
DEFINITION  classical arabinogalactan protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944297
VERSION     XP_040944297.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088363.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="classical arabinogalactan protein 1"
                     /calculated_mol_wt=11765
     CDS             1..121
                     /gene="LOC121214584"
                     /coded_by="XM_041088363.1:1..366"
                     /db_xref="GeneID:121214584"
ORIGIN      
        1 malsrfvyli mlallfcsvi aqsptpspvs spkkspsstp tpisspptis apspsevpsa
       61 ttpspatves ppspsalspn asptsisepp agapgpaens avrfgaagsv avgvlmvamv
      121 l
//
LOCUS       XP_040944298              91 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein Rab7-like [Gossypium hirsutum].
ACCESSION   XP_040944298
VERSION     XP_040944298.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088364.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..91
                     /product="ras-related protein Rab7-like"
                     /calculated_mol_wt=9574
     Region          <6..85
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(6..7,23..24)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            43..46
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            61..63
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..91
                     /gene="LOC121214585"
                     /coded_by="XM_041088364.1:1..276"
                     /db_xref="GeneID:121214585"
ORIGIN      
        1 msdhlagqer fqslgvafyr gadccvlasp sdpenfpfvv lgsnidvdgg nspsmvclet
       61 sakegvnvee afqciakdal ksgeeedmti k
//
LOCUS       XP_016690545             511 aa            linear   PLN 06-AUG-2024
DEFINITION  acetyl-CoA-benzylalcohol acetyltransferase [Gossypium hirsutum].
ACCESSION   XP_016690545
VERSION     XP_016690545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835056.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 62% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="acetyl-CoA-benzylalcohol acetyltransferase"
                     /calculated_mol_wt=55591
     Region          1..401
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..511
                     /gene="LOC107907729"
                     /coded_by="XM_016835056.1:1..1536"
                     /db_xref="GeneID:107907729"
ORIGIN      
        1 mevqiqtrkl ikpssptplh lrelklscfd qiappafgsf ifffkaping hqtlkkless
       61 lsdvltkfyp fagrfiqdrn aidcndqgae ylearvsvsl nqfileeldv klvnllvpyp
      121 nelvftptil avqinefdcg glaigtsfsh kfadgftifg fmngwatccr igvdavkcls
      181 fetesllpdg fkptykmpvp ddnldtlitk rfiftastia alkakvgvgq fsraqllial
      241 iwkvrismak kkdslqifpy nfrgktalpi psngagnlfi nilvrftand dknpdllhlv
      301 nlvgnelrna aetfgkaeta edlflsatns sreihetlsk gdteicilts lskfpyyead
      361 fgwgmpgwia svhkdvemvl lmdtrfdggv eawvtlepdn mwaarldagl llerawglll
      421 lllaccawaa gcwaaagpsa vglllrlaqs talpppgata dggvvvlsss scssgggvtv
      481 avrqrwlqee vaveqswpre aagagllvaa i
//
LOCUS       XP_040944299             388 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944299
VERSION     XP_040944299.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088365.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..388
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44279
     CDS             1..388
                     /gene="LOC107908934"
                     /coded_by="XM_041088365.1:1..1167"
                     /db_xref="GeneID:107908934"
ORIGIN      
        1 memgggrsrp kphsynqlqs srislnpdtl liiklpdprf llvlsrslfl atviitlpci
       61 rsflkgpssp vfnamefhqs sgcisldywn llwgdfvneg likkgqkali lnsfiesmdd
      121 vddddegsmf inngdidlvi epdfhrqssl pndefdfvfv sgsidskfvd rlvkiggiva
      181 mqlgdeistg yqkqsdyiiv ylkkyhstiv amkklgsknh lldssakrkl fqltteakka
      241 alsgledvlf epprkawaks hsylkkinfl pdllgdslen yprrvfidvg ssnddddkni
      301 vmkwfeenyp krnqefevys ieatasidvs dwlmmnvree dyvvmkaeae vvekmierkt
      361 iglvdelffe cnnqwlrdeg vavhqwwe
//
LOCUS       XP_016690542             160 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized PE-PGRS family protein PE_PGRS24 [Gossypium
            hirsutum].
ACCESSION   XP_016690542
VERSION     XP_016690542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835053.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..160
                     /product="uncharacterized PE-PGRS family protein
                     PE_PGRS24"
                     /calculated_mol_wt=14744
     CDS             1..160
                     /gene="LOC107907727"
                     /coded_by="XM_016835053.1:1..483"
                     /db_xref="GeneID:107907727"
ORIGIN      
        1 mfslpssspa kgpvtdaasg qvavsseagg dgtvwvvgvv fvglvtnaas gqvamldeag
       61 gdgtcrrwrq kglntvgaal fgiqgniggs ggigtlgsgg rmgvglgsgg igtgtlgsgg
      121 rlgvrlgsgg ignpgsggrm ggsggirnlg gggigkivtc
//
LOCUS       XP_040944300             354 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PELPK1 [Gossypium hirsutum].
ACCESSION   XP_040944300
VERSION     XP_040944300.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088366.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..354
                     /product="protein PELPK1"
                     /calculated_mol_wt=43263
     CDS             1..354
                     /gene="LOC107887011"
                     /coded_by="XM_041088366.1:1..1065"
                     /db_xref="GeneID:107887011"
ORIGIN      
        1 mahntrhpff lfqlllisvs lmigshtvst aarrlfetqt tsselpqlas kyekqeesey
       61 ekpeykqpky deeypkhekp eihkeekqkp ckqheeyhes hkskeheeyq kekpefpkle
      121 kpkehekhkv eypkipeyke nqdegkehkh eeyhesresk eheeyekekp efpklekpke
      181 hekheveype ipeykekqde gkehkheech esheskehee yekekpnfpk gekpkehekh
      241 eveypkipey kekqdegkeh khdecheshe skeheeyeke kpnfpkgekp kehekhevey
      301 pkipeykekq degkehkhef qkhekeeekk pekkaeysew pkymftqsgs gtkp
//
LOCUS       XP_040944301             233 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamic acid-rich protein-like [Gossypium hirsutum].
ACCESSION   XP_040944301
VERSION     XP_040944301.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088367.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..233
                     /product="glutamic acid-rich protein-like"
                     /calculated_mol_wt=28525
     CDS             1..233
                     /gene="LOC107908931"
                     /coded_by="XM_041088367.1:1..702"
                     /db_xref="GeneID:107908931"
ORIGIN      
        1 mahnirhpff lfqlllicvs pmigshtvsa atrrlfetqt tsselpqlas kyekheesey
       61 ekleykqpky heeypkhekp emheekqkpc kqheeyekek pefpkrekpk ehekheveyp
      121 kipeykekqd egkehkheey hesheskehe eyekekpkfp kwekpkehek heieypeipe
      181 ykkkqdehke hkhefpehek eeekkpekka eypewakmpe wpkstqsdsg tkp
//
LOCUS       XP_040944302             371 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944302
VERSION     XP_040944302.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088368.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..371
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40746
     CDS             1..371
                     /gene="LOC107887786"
                     /coded_by="XM_041088368.1:1..1116"
                     /db_xref="GeneID:107887786"
ORIGIN      
        1 mrkrksthdh rsnsqafdde dedllrlsls ndtrrtgarl seehssippl sslsvmppqp
       61 sssqqqaava aavslsmqtl lsqpihpltl stshilfnsg fmsppagsfv ysqepvlsvp
      121 gsssqavlss smlsqslsqg pdlsvpaaap hnlinsslvs qtlspgslsy pqepvstava
      181 ahvsvtssss prpsrvrrnp tqnlregkse tveppfpwat nhratvynin yllseknisk
      241 itgivqckkc ekqysmdfdl kekfseigsf iaenknsmhd rallswlnpv lpkckycnqe
      301 nsakpviadk kkdinwlflf lgqllgcctl eqlkyfckht knhrtgakdr vlyltylglc
      361 kqldpsgpfs r
//
LOCUS       XP_040944304             390 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944304
VERSION     XP_040944304.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088370.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..390
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44549
     Region          116..>169
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     Region          235..311
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..390
                     /gene="LOC121214586"
                     /coded_by="XM_041088370.1:1..1173"
                     /db_xref="GeneID:121214586"
ORIGIN      
        1 msargtrrrg irgrgrgrrg araessslgs mpnldtsetp vlpatetgsq shsnrddals
       61 qamlrvlerv irphsrskgr ggvtgvtptv veywleater imndidctpe qklkgavsll
      121 rdeayqwwls ieegtqpdhl nwdffkttfq ekyveasyen trrrefmnli kesrrtrlss
      181 ceivveivrs vkaikalipv lsanseihgs nergcfflql vptllfgrhv gtvlpvystf
      241 kaiesndene qrkwllywtv ygsfsvaeaf sdkllswfpf yyyakfaflv wlqlpsanga
      301 ehlymshlrp fllkhqsrld kilgyiynel akiisahqte ikfarllfmk lmasvnqigc
      361 dyiqpvqrqs ncsiegprda dsdrqseted
//
LOCUS       XP_040944305             450 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKIP22 [Gossypium hirsutum].
ACCESSION   XP_040944305
VERSION     XP_040944305.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088371.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..450
                     /product="F-box protein SKIP22"
                     /calculated_mol_wt=51504
     Region          312..356
                     /region_name="F-box_AtSKIP22-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP1-interacting partner 22 (AtSKIP22) and similar
                     proteins; cd22165"
                     /db_xref="CDD:438936"
     Site            order(316,320,323..324,327..328,332,334..335,339..341,343)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438936"
     CDS             1..450
                     /gene="LOC121214587"
                     /coded_by="XM_041088371.1:1..1353"
                     /db_xref="GeneID:121214587"
ORIGIN      
        1 mklrlknfes ketlriqlls sssilqlqea vfpclplnpl hvtpsslrfs lnakdllhap
       61 splvsllslg vasgdliyfs lnpnafsppp qtlfqepilm pessanrenp vrepmliepq
      121 vsqqankgrl lehyllrkfl geelgdirsi hnlmameihv illdsgfvlf dtvsglkidr
      181 frlpdesssp vsicyslpql lianhdfgpn ltdyivfkfq tlnnflqvyg slvkggsvyr
      241 lsldgytfep tmgllwarcf knytrtdnnq dgsyisyrek eifkfwkvvk dglalpllid
      301 lsfkiglplp acfmrlpadl klqildslpg tdvarmacvs vemryvasnn dlwrkkveee
      361 fghwlgvtrn wkkiyhscwe skkkrkrait rwrgfprvnr psyfpvrrdp iplggvhvvh
      421 dddydlparl rvpplhqlrr lrrqgyvvld
//
LOCUS       XP_016690535             205 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAIN-LIKE 2-like [Gossypium hirsutum].
ACCESSION   XP_016690535
VERSION     XP_016690535.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835046.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690535.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="protein MAIN-LIKE 2-like"
                     /calculated_mol_wt=22446
     Region          67..>205
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..205
                     /gene="LOC107907718"
                     /coded_by="XM_016835046.2:1..618"
                     /db_xref="GeneID:107907718"
ORIGIN      
        1 magiamasli stkshisdav nntesyrvlr grvsvlkdtp darlmpylel arfrsvaqir
       61 ypvlrfdlis alverwrset htfhfpcgec tvtledvalq lglpidespv tglsaftdld
      121 alcyqllgds pgdgesyfsg lqftwlkaky gelsatateg elmcaarayi mhiiggeimp
      181 danndkvhlm ylplladlss vssys
//
LOCUS       XP_016690539             295 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MAIN-LIKE 2-like [Gossypium hirsutum].
ACCESSION   XP_016690539
VERSION     XP_016690539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835050.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..295
                     /product="protein MAIN-LIKE 2-like"
                     /calculated_mol_wt=32405
     Region          99..>290
                     /region_name="PMD"
                     /note="Plant mobile domain; cl46345"
                     /db_xref="CDD:480685"
     CDS             1..295
                     /gene="LOC107907722"
                     /coded_by="XM_016835050.1:1..888"
                     /db_xref="GeneID:107907722"
ORIGIN      
        1 maneqwpkvt vadsggvsdg mgvveagaeq rrargwaeag aarprhaapr vfcckhfvff
       61 iwarvsaigl gpyralkgrv nsvgfqpder lipylelagf gsaalirtfd lrynlisalv
      121 erwrpethtf hlpcgectvt ledvavqlgl pidgnaitgi ssisrpatlc nellgrspsq
      181 gkftslrfsw lhanfkhlps tanerevmqa vrayimhlig gvlmpdangs kvhlmylpll
      241 snlhntrsys wgsavlaily relcrttnps avdiggclil lqswalyrmp flvek
//
LOCUS       XP_040944306             211 aa            linear   PLN 06-AUG-2024
DEFINITION  probable carboxylesterase 12 [Gossypium hirsutum].
ACCESSION   XP_040944306
VERSION     XP_040944306.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088372.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="probable carboxylesterase 12"
                     /calculated_mol_wt=23549
     Region          <43..186
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..211
                     /gene="LOC107908189"
                     /coded_by="XM_041088372.1:1..636"
                     /db_xref="GeneID:107908189"
ORIGIN      
        1 maewpilvhc rppsmvvvrr sddgsvntsh ydgngpeqwl nryadfenvy lsgdsagani
       61 ahhiaiktsk ekldgmnlvg milshpyfwg kepvgdevkn pavrakfegv wrlaspttsg
      121 sddplinpid dqsferflgc krvlicvaen dilkyrgwyy ceklknsgwd gevevmeaeg
      181 edhvfhlrns ccsnavaklk kvaefmnqgk a
//
LOCUS       XP_040944307             144 aa            linear   PLN 06-AUG-2024
DEFINITION  probable carboxylesterase 13 [Gossypium hirsutum].
ACCESSION   XP_040944307
VERSION     XP_040944307.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088373.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="probable carboxylesterase 13"
                     /calculated_mol_wt=15992
     Region          76..>138
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..144
                     /gene="LOC121214588"
                     /coded_by="XM_041088373.1:67..501"
                     /db_xref="GeneID:121214588"
ORIGIN      
        1 meptaseiri dipplirvyq dgrierllgt qtvppgldpk tnveskdvvy cqetgqcvri
       61 yvpgtvvtst qelpllvyfh ggrfcietaf sptyhnylna lvseskivav svdyrrapeh
      121 aipaayddsw talkwvassh fqpi
//
LOCUS       XP_040944308             285 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944308
VERSION     XP_040944308.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088374.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="uncharacterized protein"
                     /calculated_mol_wt=32083
     Region          184..>240
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..285
                     /gene="LOC121214590"
                     /coded_by="XM_041088374.1:1..858"
                     /db_xref="GeneID:121214590"
ORIGIN      
        1 mavnlkgaee tgdnlclkql kgfqfesaes yvklevklaa gicpeeitlk eaenantrwi
       61 vldshlkkyk mciywnvecn vavmkgkdva tlmpsrapkp dcspvsseqa daetwpddps
      121 lndqetgnqn vieegessiq paprgpswcp lqfrpgfpre flfseieeit ngfsdivcqe
      181 gnlkvyegvl qntpvivksi qddeqfwsml tilsrvrhrn imniigycct atnrllisdy
      241 pclysfamkl qckipssfip pfsqlkhsna ilwrasgypr rmlpf
//
LOCUS       XP_016690528             320 aa            linear   PLN 06-AUG-2024
DEFINITION  probable CCR4-associated factor 1 homolog 11 [Gossypium hirsutum].
ACCESSION   XP_016690528
VERSION     XP_016690528.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835039.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690528.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..320
                     /product="probable CCR4-associated factor 1 homolog 11"
                     /calculated_mol_wt=36445
     Region          11..>242
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; cl23804"
                     /db_xref="CDD:474062"
     CDS             1..320
                     /gene="LOC107907710"
                     /coded_by="XM_016835039.2:1..963"
                     /db_xref="GeneID:107907710"
ORIGIN      
        1 msissnksiv vrrvfaedld nelwlikvai lrypyvfmdt efpgtifkps kqvvfeenpv
       61 inyhymksnv dalqiiqlgl slsdaqgnlp dfdspfcyvw efnfkdfnin rdhyastsie
      121 llkrqgidfe knkekgidsr dfakklwdyg lvfncyglng itwitfhgay dfgfmlkmlt
      181 qsplpldlhs fvhqlayffg ynvfdlkhtf kllgllggle kiaqtlklkg aeetgdnlcl
      241 eqlkefgsvv ndagnqdaqn vensenrslk edkstpvwdq ktsssnhadq naeislpqek
      301 mtsaspncls tdkqhsqqqq
//
LOCUS       XP_040944309             406 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944309
VERSION     XP_040944309.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088375.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45023
     Region          60..192
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(60,62..64,86..88,170,184,186,188..189,192)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          60..143
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(86,108,113..114,122,148,170..172,188)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          148..192
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          154..264
                     /region_name="COG3448"
                     /note="CBS-domain-containing membrane protein [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442671"
     Region          201..368
                     /region_name="YtoI"
                     /note="Predicted transcriptional regulator containing CBS
                     domains [Transcription]; COG4109"
                     /db_xref="CDD:443285"
     CDS             1..406
                     /gene="LOC107908789"
                     /coded_by="XM_041088375.1:22..1242"
                     /db_xref="GeneID:107908789"
ORIGIN      
        1 mqdtrtdlkl leggvlkeae etikadhvgn npetdsdsat alqlfldrip innsipgikn
       61 spvvelktgd tvkdaiefly tknafgapiv dvldpeiplt rfpdryigfl dfatlvlwsl
      121 qnasketgna sketgkgnfm slleknpeig ntkdtlfhvl lliskhriqv vpvveqsnlk
      181 vtgfvtqnav iqlllqsdgl twfdsiaekp lsefrfenes vsfvygdesi adalhvlfks
      241 qtgavavinr qtrmligsvr ngdvyllmen dkifrdrkvv tveefiriet sdrdpdptie
      301 rdmgallsag vlqlrnkyrp rmdspvtnkk tdtlkeamkn vartksdfcf qvddsqhllg
      361 iltlrdiilq fsppsmnsni dgggffetal eltgcqikgg tlvcdh
//
LOCUS       XP_040944310             187 aa            linear   PLN 06-AUG-2024
DEFINITION  probable jasmonic acid carboxyl methyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_040944310
VERSION     XP_040944310.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088376.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..187
                     /product="probable jasmonic acid carboxyl
                     methyltransferase 1"
                     /calculated_mol_wt=21605
     Region          3..187
                     /region_name="Methyltransf_7"
                     /note="SAM dependent carboxyl methyltransferase; cl04109"
                     /db_xref="CDD:470949"
     CDS             1..187
                     /gene="LOC121214592"
                     /coded_by="XM_041088376.1:1..564"
                     /db_xref="GeneID:121214592"
ORIGIN      
        1 mlflvvseii diidetcrkl khpppclqaf lndlpgndfn aifkhllccf yervkiekgk
       61 nkcfftgvag sfygrlfppn slhfvhssya imwisklske eiksmieaeg sfklqtmevf
      121 nmdwddyikk adtkqvldkt rratmiandi kavgessldn hlgediiddl frrfkedvfd
      181 ymethkc
//
LOCUS       XP_016690531             488 aa            linear   PLN 06-AUG-2024
DEFINITION  AAA-ATPase At3g50940 [Gossypium hirsutum].
ACCESSION   XP_016690531
VERSION     XP_016690531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..488
                     /product="AAA-ATPase At3g50940"
                     /calculated_mol_wt=55190
     Region          57..147
                     /region_name="AAA_assoc"
                     /note="Domain associated at C-terminal with AAA;
                     pfam14363"
                     /db_xref="CDD:464152"
     Region          252..409
                     /region_name="RecA-like_BCS1"
                     /note="Mitochondrial chaperone BCS1; cd19510"
                     /db_xref="CDD:410918"
     Site            order(282,284,286..288,333)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410918"
     CDS             1..488
                     /gene="LOC107907713"
                     /coded_by="XM_016835042.2:133..1599"
                     /db_xref="GeneID:107907713"
ORIGIN      
        1 maatrkplie akprrrkkhp pnmfaknnip saqtvmstaa sfaasamviq tvarnllpye
       61 lkayifnnis kffksfsfqt tliieefdgl trnqiyraae iylgtktcss mklckvsmge
      121 ketkivvsma knqetvdvfd gvkfkwrqvt rqvesknvvf qgqssnvrse krsfelsfhk
      181 khkekvldsy lpfvlkeskr lmeekktlkl htlgndhmrr yvggaetwqp ikldhpanfg
      241 tlamntelka timedlerfl krkdyyrrvg kackrgylly gppgtgkssl iaamanylnf
      301 diydleltdi htnsdlrrvl iatgnqsilv vedidcglel hdrqtepqpn aaikpkrssq
      361 vtlsgllnfi dglwsscgde riivfttnhk drldpallrp grmdvhihms ycsptgfdtl
      421 avnylgvndh hslmsitrel laktsvtpae vgeqllknad peaalkglid flqqkvkeed
      481 evqvsdks
//
LOCUS       XP_016690501             129 aa            linear   PLN 06-AUG-2024
DEFINITION  secreted RxLR effector protein 161-like [Gossypium hirsutum].
ACCESSION   XP_016690501
VERSION     XP_016690501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835012.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..129
                     /product="secreted RxLR effector protein 161-like"
                     /calculated_mol_wt=14304
     Region          48..>129
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(52..55,90..92,95,128)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..129
                     /gene="LOC107907680"
                     /coded_by="XM_016835012.1:1..390"
                     /db_xref="GeneID:107907680"
ORIGIN      
        1 mhavtllsrf mhccnvahfk avkrvlryvk etlgygvkfe kaedlklvgy sdsdwaglvd
       61 dmkstsgyff tlgsgvfsws snkqqtvaqs taeteyivaa tavqaiwlrk llsdlnddqv
      121 eateikvdn
//
LOCUS       XP_016690499             105 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR21 [Gossypium hirsutum].
ACCESSION   XP_016690499
VERSION     XP_016690499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835010.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="auxin-responsive protein SAUR21"
                     /calculated_mol_wt=11967
     Region          13..95
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..105
                     /gene="LOC107907676"
                     /coded_by="XM_016835010.1:1..318"
                     /db_xref="GeneID:107907676"
ORIGIN      
        1 mgirlpemml hakqtirrws rskhqysyrt sssvnvpkgh favyvgdeek nkrlvvpisy
       61 lkhplfqall nqaeqefgfd hplgglmvpc aedefinpts rtmha
//
LOCUS       XP_016690497             154 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR68 [Gossypium hirsutum].
ACCESSION   XP_016690497
VERSION     XP_016690497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835008.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..154
                     /product="auxin-responsive protein SAUR68"
                     /calculated_mol_wt=17272
     Region          11..111
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..154
                     /gene="LOC107907674"
                     /coded_by="XM_016835008.1:1..465"
                     /db_xref="GeneID:107907674"
ORIGIN      
        1 mppqqstwfy pqaldcikki atvgrkrits artnrkvasg avnhyekssv vvkgcfvift
       61 tdkrhfvipl aflsncifre lfkmseeefv lpsdgpitlp cdsvfmnyii sivkrglskd
      121 leravvnsis tycfssdtnf nqghedtqsl vfgf
//
LOCUS       XP_016690496             151 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR68 [Gossypium hirsutum].
ACCESSION   XP_016690496
VERSION     XP_016690496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835007.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..151
                     /product="auxin-responsive protein SAUR68"
                     /calculated_mol_wt=17173
     Region          7..105
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..151
                     /gene="LOC107907673"
                     /coded_by="XM_016835007.1:1..456"
                     /db_xref="GeneID:107907673"
ORIGIN      
        1 mittkklirk erkwqkiasi grkriasart ntkiaaaaan dynrssevvk gcfviftmdk
       61 rrlliplvfl sicifrelfk lseeefglps dgpitfpcdt vfmnyfvfia krglskdler
      121 svvnsistyh cssdtyfnqg hedpkslvce f
//
LOCUS       XP_016691055             135 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin-responsive protein SAUR67 [Gossypium hirsutum].
ACCESSION   XP_016691055
VERSION     XP_016691055.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835566.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691055.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="auxin-responsive protein SAUR67"
                     /calculated_mol_wt=15469
     Region          7..91
                     /region_name="Auxin_inducible"
                     /note="Auxin responsive protein; pfam02519"
                     /db_xref="CDD:460580"
     CDS             1..135
                     /gene="LOC107908399"
                     /coded_by="XM_016835566.2:1..408"
                     /db_xref="GeneID:107908399"
ORIGIN      
        1 micarklikl arkwqklaai krkritfsnt ssmeghfvvy sadekrfmlp leylkneivm
       61 elfnlaeaef gipsnghlkl pfdstfmeya ielikrkask evekalimsi vtghcsssln
      121 lnqqetnqql piwsf
//
LOCUS       XP_040944311             713 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944311
VERSION     XP_040944311.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088377.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..713
                     /product="uncharacterized protein"
                     /calculated_mol_wt=83864
     Region          74..413
                     /region_name="DUF4220"
                     /note="Domain of unknown function (DUF4220); pfam13968"
                     /db_xref="CDD:464058"
     Region          636..690
                     /region_name="DUF594"
                     /note="Protein of unknown function, DUF594; pfam04578"
                     /db_xref="CDD:461358"
     CDS             1..713
                     /gene="LOC107907671"
                     /coded_by="XM_041088377.1:142..2283"
                     /db_xref="GeneID:107907671"
ORIGIN      
        1 mlfaiaisll yveikdsvlk rvfseivkkf wskwelrsmv mlslilqfll vyfgrkrkky
       61 tgnwvpliav iawliyfsad wmatlvlstl lrgsselkeg livfwtpfll whlgspynit
      121 ayslednelw lrhflgmffq igeaiyiyvr frsnttlnam aiplfiggvl kfleriwalr
      181 canpkqlmky fysspkkenp stsdsaarse mremirtglf dpsekrgfig dpritsevrf
      241 lrevdsafev fkplftdlpf qiskafhdem vflnpstrta aeafnfvkie leflydllyt
      301 knplqhrhhi vslalrcicf fsllsvliaf svlyrkieds tvdvvvtytl llgavwlesy
      361 sfymhirskw tilryavrgh krlklycrlv qnrlyliksq egiqkmaqhd fleycvkaka
      421 sqfaqilkfi dpgdllqkfw ytkwkevdie lkkfiynhll pifnnlnekr skfekglfkl
      481 eclekilaer gdnvlqekgf dpdekdeywk lkttdfprqi fvwhiatslv yyndlskhrr
      541 stlfnpvcki skslsdymmy lvlvrptmlp kgfsdivnke tyqqtqrisp kkkmkvsmee
      601 fneallsfgf nkfsengalw dgikfakqlq slvreerwdh eekwkmisev wmemmvygas
      661 rctweehaqq lrhggellth valimahlgl ttqvqrleks adhpiasafp tpf
//
LOCUS       XP_016691319             137 aa            linear   PLN 06-AUG-2024
DEFINITION  self-incompatibility protein S1 [Gossypium hirsutum].
ACCESSION   XP_016691319
VERSION     XP_016691319.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835830.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="self-incompatibility protein S1"
                     /calculated_mol_wt=15325
     Region          31..120
                     /region_name="Self-incomp_S1"
                     /note="Plant self-incompatibility protein S1; pfam05938"
                     /db_xref="CDD:461784"
     CDS             1..137
                     /gene="LOC107908611"
                     /coded_by="XM_016835830.2:1..414"
                     /db_xref="GeneID:107908611"
ORIGIN      
        1 mqasalvfsn alvillifss ctsvhsddnv hvsiknrlgn gknltlhcqs kdtdlgeqnv
       61 adgseygwdf tpnvwgttly ycgmgweevq qynydaysfq rdfvrcvsqc swlisaegiy
      121 glngntgfwe faynwss
//
LOCUS       XP_016690493             171 aa            linear   PLN 06-AUG-2024
DEFINITION  BURP domain-containing protein 17 [Gossypium hirsutum].
ACCESSION   XP_016690493
VERSION     XP_016690493.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835004.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="BURP domain-containing protein 17"
                     /calculated_mol_wt=18971
     Region          <1..170
                     /region_name="BURP"
                     /note="BURP domain; cl03923"
                     /db_xref="CDD:470910"
     CDS             1..171
                     /gene="LOC107907670"
                     /coded_by="XM_016835004.1:1..516"
                     /db_xref="GeneID:107907670"
ORIGIN      
        1 mtdtlpkceh apgitnitny hqlkvkprpc atsfqsmvdf vsgafkvapq dtkfittthp
       61 tmstsslkny kvlespneik ssrkgachpm lylyavffcq ydeelservf kvsmvgedtk
      121 atiqthpkdn inaaavchmd saraallnlm dkqgkspmch fcsagdliwf q
//
LOCUS       XP_016690491             236 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL62, partial [Gossypium hirsutum].
ACCESSION   XP_016690491
VERSION     XP_016690491.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835002.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690491.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..236
                     /product="agamous-like MADS-box protein AGL62"
     Region          11..82
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(11..13,15,17,22,24,28..29,32..33,35..36,39..40,
                     42..43,47)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(30,37..38,41..42,44..45,48,53,55,57,63,65,71,74..75,
                     78,81..82)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            68
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          <106..179
                     /region_name="STAT_CCD"
                     /note="Coiled-coil domain of Signal Transducer and
                     Activator of Transcription (STAT), also called alpha
                     domain; cl28921"
                     /db_xref="CDD:355797"
     CDS             1..236
                     /gene="LOC107907669"
                     /coded_by="XM_016835002.2:<1..711"
                     /db_xref="GeneID:107907669"
ORIGIN      
        1 iaiamgkksl grqkvemvkm knnsnlqvtf skrrsglfkk aselctlcgv eigiivfspg
       61 nkvfsfghpe ignvidryvn gnppdnsgtl hlieahrnan vrelnmqlte lvnqieiekr
      121 rgeelnqmrr asqsqywwes pieeqnpqql qqlksaleel kknvakqvek lliqttnsqp
      181 ffvgsssagm fpnnvefdpn tmsqgynnvp nmippgfnpn pelynpcppg fgheff
//
LOCUS       XP_040944312             606 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944312
VERSION     XP_040944312.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088378.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..606
                     /product="uncharacterized protein"
                     /calculated_mol_wt=66904
     CDS             1..606
                     /gene="LOC121214593"
                     /coded_by="XM_041088378.1:1..1821"
                     /db_xref="GeneID:121214593"
ORIGIN      
        1 malcsyaqql fdlmllgedv sleinesnsy kvecgelgkr vsqllqllsd llittaptpl
       61 ylrpincmva klkghfeaar rivcnckhrn liwrlfasri aaefeelfhv ldgfigemew
      121 vvrlyeallr nglklaqtrg gcfktvdrms ptasvwscia tvemgssldd rieavnhlas
      181 lvrhkhkdii veeggvdslm kllkencplv aniaaantlc llanednegt imnemvstfi
      241 kslsktspis kqtqtadlva siaernpesk qhdlirenii wqlvillsse qstlelkisc
      301 skalwklaqg svsncqtlte tkgmlclakl vakeqgelry ncimiikeit siaesdngfr
      361 rsaftssspa akavvdellr vikelddikl gvpaiksigs larsfsakhs rvigplvarl
      421 gntdqdvame aaialkkfvs tnnylcsehs ksiiefegvp llmkllnsgd ksthphvlal
      481 icylaqhdsn snvlieagal talqtidpkv ntkyreletl vphtisklqs yltveqqqte
      541 sstgikqfft kqskavvati ggrlkllykg ltvylprlvk nprksilgai pplkttriqq
      601 flkakl
//
LOCUS       XP_016690488             611 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690488
VERSION     XP_016690488.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834999.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..611
                     /product="uncharacterized protein"
                     /calculated_mol_wt=68828
     CDS             1..611
                     /gene="LOC107907665"
                     /coded_by="XM_016834999.1:1..1836"
                     /db_xref="GeneID:107907665"
ORIGIN      
        1 msseqkklmk nllldmillg qdvcsainrs nsfkvkcsel gmrvnrlllm lrslprflts
       61 aapfyllsvn sivvklednf kvaqrvvhnc kprrrlcrff tghiristdf qelfhvldas
      121 itemewlvsh yepqskdrgs mysptvlvws ciatvemgps lddrieaanr laslvqqkdf
      181 eykqlifegg lpslikllke nspvahiaaa nalcllanee eeksgtimke lihtiasrls
      241 rtssrcgqkq aadlvadiae rnpelkryhf mreeavwrlv illssqqspl elkiscskal
      301 wklaqgsvwi cktltetkgm rclaelvakg qdelrfncim iikeittiae sdirlrrsaf
      361 tssspaakal icellriike rddakvrvpa iksigslars fsarkgrvii slliaqlgnt
      421 dqevameaai alrkfvstdn ylrsehsesi vkfdgvqllm klvsedtkaq pyvlalicyl
      481 aqhdtnsnvl inaraltalq ttdpeviteh peletlvpha isrlhfnlte dqlqtdsptg
      541 ikqiiteqgk evvdtvrrgl kllpkgdskt pqmvtrckkr ilgaipplkn kriqqflnls
      601 awnwqyyvwt a
//
LOCUS       XP_016690487             530 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690487
VERSION     XP_016690487.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834998.2
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690487.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58387
     CDS             1..530
                     /gene="LOC107907664"
                     /coded_by="XM_016834998.2:1..1593"
                     /db_xref="GeneID:107907664"
ORIGIN      
        1 maldsdarki fdlillgedv clavnesnsf kvecgelgkr levyfmaaqd ivrnrthqnl
       61 fcrlftsria tdfqklfhvl dasvtdmewv vslyepqnrg rsccktdnsv sptalvwsci
      121 aniemgssld drieacdrla slvrhkdeyk hiiveggvds lmkllkencp lvahiaaant
      181 lcllanedne gtimkemvst fikslsktsp iskqtqaadl vasiaelnpe skqhdliren
      241 iiwqlvills seqstlelki scskalwkla qgsvsncrtl tetkgmlcla tlvakeqgel
      301 ryncimiike itsiaesdng frssaftsss paakavvdel lrvikelddt klrvpaiksi
      361 gslarsflar qsrvigplaa rlgntdqdva meaaialkkf vstdnylcse hsksiiefeg
      421 vpllmkllns gdksthphvl alicylaqhd snsnvlikag altalqtidp eviteyrele
      481 tlvphtiskl qsyltveqqq tesstgikqi ftkqskavva tiggrlklly
//
LOCUS       XP_016691049             220 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LURP-one-related 10 [Gossypium hirsutum].
ACCESSION   XP_016691049
VERSION     XP_016691049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835560.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="protein LURP-one-related 10"
                     /calculated_mol_wt=23839
     Region          17..197
                     /region_name="LOR"
                     /note="LURP-one-related; pfam04525"
                     /db_xref="CDD:398294"
     CDS             1..220
                     /gene="LOC107908386"
                     /coded_by="XM_016835560.2:160..822"
                     /db_xref="GeneID:107908386"
ORIGIN      
        1 maypsssssq planpvsiis shfcapypid laiirnvlti sdgsfvvtdi ngnivfkvkg
       61 aflsvhdrrl lldgagnpiv tlkqklmsah drwqvfkgds tdssdllfsa krssmfqlkt
      121 kldvflannt keevcdfkvk gswlerscvv yagesstiva qmhkkhtves iligkdkfmv
      181 avypnidyas vvalivildg inkedssgsg gdfdflggin
//
LOCUS       XP_040944313             146 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944313
VERSION     XP_040944313.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088379.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..146
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=16455
     CDS             1..146
                     /gene="LOC121214595"
                     /coded_by="XM_041088379.1:130..570"
                     /db_xref="GeneID:121214595"
ORIGIN      
        1 mvfknifpdi dintvklssc qrivllnynk nvsslhpfqa rsqlftkkdr svgeagtsal
       61 lddlwfssds flhcfckdlf slvqdasvvd gdllswtrkl kellenslgw efqqkssvdg
      121 iyfeendeya pmvemldeps gsepts
//
LOCUS       XP_040944314             124 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944314
VERSION     XP_040944314.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088380.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..124
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=13957
     CDS             1..124
                     /gene="LOC121214595"
                     /coded_by="XM_041088380.1:135..509"
                     /db_xref="GeneID:121214595"
ORIGIN      
        1 mvfknifpdi dintpfqars qlftkkdrsv geagtsalld dlwfssdsfl hcfckdlfsl
       61 vqdasvvdgd llswtrklke llenslgwef qqkssvdgiy feendeyapm vemldepsgs
      121 epts
//
LOCUS       XP_016694220             191 aa            linear   PLN 06-AUG-2024
DEFINITION  polyadenylate-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016694220
VERSION     XP_016694220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..191
                     /product="polyadenylate-binding protein 2"
                     /calculated_mol_wt=20805
     Region          31..>183
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..191
                     /gene="LOC107910751"
                     /coded_by="XM_016838731.2:454..1029"
                     /db_xref="GeneID:107910751"
ORIGIN      
        1 maqvqvqhha svsgpisvas ghggaqfmpt slyvgdldvs vtdeqlyqtf gevapvvsvr
       61 vcrdtatgrs lgygyvnynn prdaaraldl lnftpmnnkp irimysqrdp slrksgtani
      121 fiknldksid hkalhdtfss fgnilsckis tdglgqskgy gfvqfdkeks aqnaidklra
      181 rlvrciglev y
//
LOCUS       XP_016691047             255 aa            linear   PLN 06-AUG-2024
DEFINITION  fasciclin-like arabinogalactan protein 21 [Gossypium hirsutum].
ACCESSION   XP_016691047
VERSION     XP_016691047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835558.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..255
                     /product="fasciclin-like arabinogalactan protein 21"
                     /calculated_mol_wt=27642
     Region          76..181
                     /region_name="FAS1"
                     /note="Four repeated domains in the Fasciclin I family of
                     proteins, present in many other contexts; smart00554"
                     /db_xref="CDD:214719"
     CDS             1..255
                     /gene="LOC107908384"
                     /coded_by="XM_016835558.2:243..1010"
                     /db_xref="GeneID:107908384"
ORIGIN      
        1 mikhslfflf lllpisafsa nhhrrrrppp sppsppplhq hqlnniidal vgagdfnnwa
       61 nmlsashffm lplsatlfvp sddsvfpfpv pvptssttaa aasatafdpl iipyhivpqr
      121 ltfsqltlfk pfsrlptllp sktllitnss hsnftldasq ishpdlylts aiavhgiasl
      181 lnytvyggdp glvhglapal pppppppamf qplgdtmgdr rrsdagclyg efafvlllip
      241 wlvwcikiyg nplgl
//
LOCUS       XP_016693853             611 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: aspartic proteinase oryzasin-1 [Gossypium
            hirsutum].
ACCESSION   XP_016693853
VERSION     XP_016693853.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838364.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693853.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..611
                     /product="LOW QUALITY PROTEIN: aspartic proteinase
                     oryzasin-1"
                     /calculated_mol_wt=67180
     Region          174..609
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(202,204,206,243..245,291)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133162"
     Site            202..204
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133162"
     Site            202
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133162"
     Site            order(243..246,250..253)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133162"
     Region          417..449
                     /region_name="SapB_2"
                     /note="Saposin-like type B, region 2; pfam03489"
                     /db_xref="CDD:460945"
     Region          481..518
                     /region_name="SapB_1"
                     /note="Saposin-like type B, region 1; pfam05184"
                     /db_xref="CDD:461575"
     CDS             1..611
                     /gene="LOC107910509"
                     /coded_by="XM_016838364.2:16..1851"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107910509"
ORIGIN      
        1 mhhkkfrgef qnsktelarl etslfvpirs lhctlitgge relvcslvit lkeealylst
       61 vslflcfcyt ldwssfsffa dpffllklfl vsgylgkmgd nfvllvmcll tstfsmsvai
      121 tsssngvvrl glkkqslgfn siyaatrikg rystyakgav tttqdsdase mniislknym
      181 diqyfgeigi gsppqnftvi fdtgssnlwi psshchfsva cffhsrynss nsstyteigk
      241 pckinygsgm ilgffsedni kvgdlvvknq vfteatregs vvlslasfdg ilglgfqdis
      301 vgnvaplwhs mmqqslvaqk vfsfwfnkdp maseggelvf ggvdpkhfkg qhtyvpvtqk
      361 gywqidledf lvadqstgcc inctaivdsg tafiagpfda vkkindaiea kgfvsmeckx
      421 avsqygdliw qlllsglqpd klcssigics fngtqhlsds ikmvveqkge thndtevgqd
      481 lvcaaceltv awmrtemmqk ktrgrvieyv nklcdtlpnp ttqlavdctk ipsmptvsfv
      541 ignksfhlnp dqyilkveqd matfcisgfi pldvpvsppq gplwilgeif meayhtvfdf
      601 gnlrvgfaea a
//
LOCUS       XP_016693851             165 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Gossypium hirsutum].
ACCESSION   XP_016693851
VERSION     XP_016693851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838362.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..165
                     /product="1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1"
                     /calculated_mol_wt=17527
     Region          15..165
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(54,82,89..92)
                     /site_type="other"
                     /note="CoenzymeA binding site [chemical binding]"
                     /db_xref="CDD:239527"
     Site            order(55,57,60,83..87,89)
                     /site_type="other"
                     /note="subunit interaction site [polypeptide binding]"
                     /db_xref="CDD:239527"
     Site            order(56,64..65,68..69,82)
                     /site_type="active"
                     /note="PHB binding site [active]"
                     /db_xref="CDD:239527"
     CDS             1..165
                     /gene="LOC107910507"
                     /coded_by="XM_016838362.2:169..666"
                     /db_xref="GeneID:107910507"
ORIGIN      
        1 mdesssssss ssdktanlds alhllgfqlq dlsptkvngh lhvthkccqp fkvlhggvsa
       61 liaealasig ahmasgfqrv agihlsinhl kraelgdfif aeatpvspgk tiqvwevrlw
      121 ktkdsasssd srtlvsssrv tllcnlpvpd hakdaadnlk kyakl
//
LOCUS       XP_016691032              84 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691032
VERSION     XP_016691032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835543.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..84
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9402
     CDS             1..84
                     /gene="LOC107908367"
                     /coded_by="XM_016835543.2:241..495"
                     /db_xref="GeneID:107908367"
ORIGIN      
        1 mgsagytkqr kshssfsifs ifasccsnga ddmsedgmyg rriwrsdedg rrwtaepgid
       61 rkasafidrf rtrvsdperq tlsv
//
LOCUS       XP_040944315             196 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944315
VERSION     XP_040944315.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088381.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..196
                     /product="uncharacterized protein"
                     /calculated_mol_wt=21976
     Region          38..174
                     /region_name="RNase_HI_RT_Ty1"
                     /note="Ty1/Copia family of RNase HI in long-term repeat
                     retroelements; cd09272"
                     /db_xref="CDD:260004"
     Site            order(42..45,80..82,85,119,145,172)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260004"
     CDS             1..196
                     /gene="LOC107910506"
                     /coded_by="XM_041088381.1:22..612"
                     /db_xref="GeneID:107910506"
ORIGIN      
        1 mekpkqdhli aakrilryik gtmnhglfyt hsqdsklvgy sdsdyggdld drkstsgyaf
       61 hissavfsws skkqqtials tceaeymaaa tctcqamwlk nilgeigvsn egpitiyvdn
      121 ksaislaknp vshsrskhid tkyhfireqv knknvelvhc rtedqladif tkplkvetfn
      181 kfkeklgmkv gfegec
//
LOCUS       XP_016693848             575 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 9 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693848
VERSION     XP_016693848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..575
                     /product="O-fucosyltransferase 9 isoform X1"
                     /calculated_mol_wt=64339
     Region          167..504
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(175..178,341,343,421..423,465,484..486)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..575
                     /gene="LOC107910504"
                     /coded_by="XM_016838359.2:1428..3155"
                     /db_xref="GeneID:107910504"
ORIGIN      
        1 mhglsrlgtg snrsvspspp ssprfrhgry knfagggggv grggkqsaan kivfvlistv
       61 frrkgvllfa pllyisgmll ymgllgfdvv slknavvvvh rrsppgsvyr spqlfrklwp
      121 ymeaesnath nalmtawnlk mhqgwkpcvn siisktgfse lpksngflii eangglnqqr
      181 lsicdavava wllnatlvip ifhlnsvwrd sskfgdifde effvhalrnh vnvvrelped
      241 vlqrfdnnis nivnlrvkgw ssaahylqkv lpkleamgav riapfsnrla ysvpsnvqgv
      301 rclsnflalr faepirtlad kmvermvmns shtggkyvsv hlrfemdmva fscceydgge
      361 eekremdiar erswrgkfrr rgrvirpgan rmdgkcpltp levglmlrgm gfdnntsvfv
      421 aagniykaek ymaplkqmfp lletkdtlat peelapfkgh ssrlaaldyt vclhsevfvt
      481 tqggnfphfl mghrrylfgg haktikpdkr klallfdsph irwetfrrqm kdmlrhsdvk
      541 ggelkkpsgs vytfpmpdcm ckqteaaane sslsf
//
LOCUS       XP_040944316             547 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 9 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944316
VERSION     XP_040944316.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088382.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..547
                     /product="O-fucosyltransferase 9 isoform X2"
                     /calculated_mol_wt=61262
     Region          139..476
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(147..150,313,315,393..395,437,456..458)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..547
                     /gene="LOC107910504"
                     /coded_by="XM_041088382.1:161..1804"
                     /db_xref="GeneID:107910504"
ORIGIN      
        1 mhglsrlgtg snrsvspspp ssprfrhgry knfagggggv grggkqsaan kivfvlistv
       61 frrkgvllfa pllrsppgsv yrspqlfrkl wpymeaesna thnalmtawn lkmhqgwkpc
      121 vnsiisktgf selpksngfl iieangglnq qrlsicdava vawllnatlv ipifhlnsvw
      181 rdsskfgdif deeffvhalr nhvnvvrelp edvlqrfdnn isnivnlrvk gwssaahylq
      241 kvlpkleamg avriapfsnr laysvpsnvq gvrclsnfla lrfaepirtl adkmvermvm
      301 nsshtggkyv svhlrfemdm vafscceydg geeekremdi arerswrgkf rrrgrvirpg
      361 anrmdgkcpl tplevglmlr gmgfdnntsv fvaagniyka ekymaplkqm fplletkdtl
      421 atpeelapfk ghssrlaald ytvclhsevf vttqggnfph flmghrrylf gghaktikpd
      481 krklallfds phirwetfrr qmkdmlrhsd vkggelkkps gsvytfpmpd cmckqteaaa
      541 nesslsf
//
LOCUS       XP_016693849             509 aa            linear   PLN 06-AUG-2024
DEFINITION  O-fucosyltransferase 9 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693849
VERSION     XP_016693849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..509
                     /product="O-fucosyltransferase 9 isoform X3"
                     /calculated_mol_wt=56760
     Region          167..438
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(175..178,275,277,355..357,399,418..420)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..509
                     /gene="LOC107910504"
                     /coded_by="XM_016838360.2:160..1689"
                     /db_xref="GeneID:107910504"
ORIGIN      
        1 mhglsrlgtg snrsvspspp ssprfrhgry knfagggggv grggkqsaan kivfvlistv
       61 frrkgvllfa pllyisgmll ymgllgfdvv slknavvvvh rrsppgsvyr spqlfrklwp
      121 ymeaesnath nalmtawnlk mhqgwkpcvn siisktgfse lpksngflii eangglnqqr
      181 lsicdavava wllnatlvip ifhlnsvwrd sravriapfs nrlaysvpsn vqgvrclsnf
      241 lalrfaepir tladkmverm vmnsshtggk yvsvhlrfem dmvafsccey dggeeekrem
      301 diarerswrg kfrrrgrvir pganrmdgkc pltplevglm lrgmgfdnnt svfvaagniy
      361 kaekymaplk qmfplletkd tlatpeelap fkghssrlaa ldytvclhse vfvttqggnf
      421 phflmghrry lfgghaktik pdkrklallf dsphirwetf rrqmkdmlrh sdvkggelkk
      481 psgsvytfpm pdcmckqtea aanesslsf
//
LOCUS       XP_016693847             508 aa            linear   PLN 06-AUG-2024
DEFINITION  calcium-dependent protein kinase 11 [Gossypium hirsutum].
ACCESSION   XP_016693847
VERSION     XP_016693847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..508
                     /product="calcium-dependent protein kinase 11"
                     /calculated_mol_wt=56711
     Region          29..287
                     /region_name="STKc_CAMK"
                     /note="The catalytic domain of CAMK family
                     Serine/Threonine Kinases; cd05117"
                     /db_xref="CDD:270687"
     Site            order(36..40,44,57,59,92,108..111,115,117,153..154,156,
                     158..159,161,174..175,178,192..196,198)
                     /site_type="active"
                     /db_xref="CDD:270687"
     Site            order(36..39,44,57,59,92,108..111,115,158..159,161,
                     174..175)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270687"
     Site            order(40,115,117,153..154,156,158,178,192..196,198)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270687"
     Site            order(174..182,192..196)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270687"
     Region          324..466
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..508
                     /gene="LOC107910503"
                     /coded_by="XM_016838358.2:260..1786"
                     /db_xref="GeneID:107910503"
ORIGIN      
        1 mnnqsssipt ttatkgwvlp yetprlrdhy vvgkklgqgq fgttyecihk atgtvfacks
       61 ipkrkllcre dyddvwreik imhhlsehps vvriegtyed svfvhlvmei clggelfdri
      121 vakghysere aakliktivg vveachslgv mhrdlkpenf lfdspgddav lkatdfglsi
      181 fykpgqryad vvgspfyvap evlckhygpe idiwsagvil yillsgvppf waetesgifr
      241 qilhgkldft sepwpsises akdlirkmle rhpksrisay qvlchpwivd drvapdkpld
      301 savlsrlkqf samnklkkma lrviaerlse eeigglkelf kmidtdssgt ityqelkdgl
      361 kkvgselmes eikslmeaad idnngtidyg efiaatlhmn klereeniva aftffdkdgs
      421 gyitvdelqq ackefglgdv hledmikeid qdndgridyg efaammrkgd glgrsismrs
      481 nlnkniadaf glgvkdltsi ssssnsns
//
LOCUS       XP_016693846             278 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized membrane protein At4g09580 [Gossypium hirsutum].
ACCESSION   XP_016693846
VERSION     XP_016693846.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693846.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..278
                     /product="uncharacterized membrane protein At4g09580"
                     /calculated_mol_wt=31087
     Region          90..275
                     /region_name="TVP38"
                     /note="Uncharacterized membrane protein YdjX, related to
                     fungal oxalate transporter, TVP38/TMEM64 family [Function
                     unknown]; COG0398"
                     /db_xref="CDD:440167"
     CDS             1..278
                     /gene="LOC107910502"
                     /coded_by="XM_016838357.2:384..1220"
                     /db_xref="GeneID:107910502"
ORIGIN      
        1 maaprtvlrd eesaaaalln nsskedddsp tgkrlkserf pvsrwelaaf fgvflifstg
       61 lfciyltmpa teygklkipr sisdlrllkd niatyasdyp tqfilgycst yifmqtfmip
      121 gtifmsllag alfgvkgvfl vvfnatagac scfflsklig rplvswlwpd klrffqaeia
      181 krrdkllnym lflritptlp nlfinlaspi vdipfhvffl atfvglipas yitvkaglal
      241 gdlrsvkdly nfktlsvlfl iglvsifptl lkkkkiye
//
LOCUS       XP_016693845             101 aa            linear   PLN 06-AUG-2024
DEFINITION  snakin-2 [Gossypium hirsutum].
ACCESSION   XP_016693845
VERSION     XP_016693845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..101
                     /product="snakin-2"
                     /calculated_mol_wt=10880
     Region          42..101
                     /region_name="GASA"
                     /note="Gibberellin regulated protein; pfam02704"
                     /db_xref="CDD:460657"
     CDS             1..101
                     /gene="LOC107910501"
                     /coded_by="XM_016838356.2:208..513"
                     /db_xref="GeneID:107910501"
ORIGIN      
        1 massrtstpl lslllclvll cevgmlmaql saaqapgpqd acpnkcakrc slswkpkmcn
       61 ktciacchrc pdhcvpdgpr asrdschcys qikthnkfkc p
//
LOCUS       XP_040944317             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944317
VERSION     XP_040944317.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088383.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25117
     Region          138..>200
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..220
                     /gene="LOC107910500"
                     /coded_by="XM_041088383.1:523..1185"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mdlwfsclgw glllpflsdl tkphffsiqh lqhsllqpda atsapnivpf svtfssrlpq
       61 tvirrvgssh fsphkwainv ntegktweac rqalsafgfs neeedkilgk afglvhspyw
      121 geerkkeepr feivneiley lrslglsddd lrkllkkfpe vlgcdiehel rtnvqilekd
      181 wgikgkslkn lllrnpkvlg ynvdckgdcm aqctrcwvrf
//
LOCUS       XP_040944318             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944318
VERSION     XP_040944318.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088384.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25117
     Region          138..>200
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..220
                     /gene="LOC107910500"
                     /coded_by="XM_041088384.1:537..1199"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mdlwfsclgw glllpflsdl tkphffsiqh lqhsllqpda atsapnivpf svtfssrlpq
       61 tvirrvgssh fsphkwainv ntegktweac rqalsafgfs neeedkilgk afglvhspyw
      121 geerkkeepr feivneiley lrslglsddd lrkllkkfpe vlgcdiehel rtnvqilekd
      181 wgikgkslkn lllrnpkvlg ynvdckgdcm aqctrcwvrf
//
LOCUS       XP_040944320             220 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944320
VERSION     XP_040944320.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088386.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25117
     Region          138..>200
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..220
                     /gene="LOC107910500"
                     /coded_by="XM_041088386.1:518..1180"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mdlwfsclgw glllpflsdl tkphffsiqh lqhsllqpda atsapnivpf svtfssrlpq
       61 tvirrvgssh fsphkwainv ntegktweac rqalsafgfs neeedkilgk afglvhspyw
      121 geerkkeepr feivneiley lrslglsddd lrkllkkfpe vlgcdiehel rtnvqilekd
      181 wgikgkslkn lllrnpkvlg ynvdckgdcm aqctrcwvrf
//
LOCUS       XP_040944321             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944321
VERSION     XP_040944321.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088387.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23014
     Region          123..>185
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..205
                     /gene="LOC107910500"
                     /coded_by="XM_041088387.1:222..839"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mlgnslassl ltfdsatscf cvpdaatsap nivpfsvtfs srlpqtvirr vgsshfsphk
       61 wainvntegk tweacrqals afgfsneeed kilgkafglv hspywgeerk keeprfeivn
      121 eileylrslg lsdddlrkll kkfpevlgcd iehelrtnvq ilekdwgikg kslknlllrn
      181 pkvlgynvdc kgdcmaqctr cwvrf
//
LOCUS       XP_040944322             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944322
VERSION     XP_040944322.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088388.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23014
     Region          123..>185
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..205
                     /gene="LOC107910500"
                     /coded_by="XM_041088388.1:382..999"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mlgnslassl ltfdsatscf cvpdaatsap nivpfsvtfs srlpqtvirr vgsshfsphk
       61 wainvntegk tweacrqals afgfsneeed kilgkafglv hspywgeerk keeprfeivn
      121 eileylrslg lsdddlrkll kkfpevlgcd iehelrtnvq ilekdwgikg kslknlllrn
      181 pkvlgynvdc kgdcmaqctr cwvrf
//
LOCUS       XP_040944323             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944323
VERSION     XP_040944323.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088389.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23014
     Region          123..>185
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..205
                     /gene="LOC107910500"
                     /coded_by="XM_041088389.1:222..839"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mlgnslassl ltfdsatscf cvpdaatsap nivpfsvtfs srlpqtvirr vgsshfsphk
       61 wainvntegk tweacrqals afgfsneeed kilgkafglv hspywgeerk keeprfeivn
      121 eileylrslg lsdddlrkll kkfpevlgcd iehelrtnvq ilekdwgikg kslknlllrn
      181 pkvlgynvdc kgdcmaqctr cwvrf
//
LOCUS       XP_016693844             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693844
VERSION     XP_016693844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838355.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23014
     Region          123..>185
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..205
                     /gene="LOC107910500"
                     /coded_by="XM_016838355.2:387..1004"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mlgnslassl ltfdsatscf cvpdaatsap nivpfsvtfs srlpqtvirr vgsshfsphk
       61 wainvntegk tweacrqals afgfsneeed kilgkafglv hspywgeerk keeprfeivn
      121 eileylrslg lsdddlrkll kkfpevlgcd iehelrtnvq ilekdwgikg kslknlllrn
      181 pkvlgynvdc kgdcmaqctr cwvrf
//
LOCUS       XP_040944324             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944324
VERSION     XP_040944324.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088390.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23014
     Region          123..>185
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..205
                     /gene="LOC107910500"
                     /coded_by="XM_041088390.1:227..844"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mlgnslassl ltfdsatscf cvpdaatsap nivpfsvtfs srlpqtvirr vgsshfsphk
       61 wainvntegk tweacrqals afgfsneeed kilgkafglv hspywgeerk keeprfeivn
      121 eileylrslg lsdddlrkll kkfpevlgcd iehelrtnvq ilekdwgikg kslknlllrn
      181 pkvlgynvdc kgdcmaqctr cwvrf
//
LOCUS       XP_040944325             205 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944325
VERSION     XP_040944325.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088391.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23014
     Region          123..>185
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..205
                     /gene="LOC107910500"
                     /coded_by="XM_041088391.1:111..728"
                     /db_xref="GeneID:107910500"
ORIGIN      
        1 mlgnslassl ltfdsatscf cvpdaatsap nivpfsvtfs srlpqtvirr vgsshfsphk
       61 wainvntegk tweacrqals afgfsneeed kilgkafglv hspywgeerk keeprfeivn
      121 eileylrslg lsdddlrkll kkfpevlgcd iehelrtnvq ilekdwgikg kslknlllrn
      181 pkvlgynvdc kgdcmaqctr cwvrf
//
LOCUS       XP_016693842              87 aa            linear   PLN 06-AUG-2024
DEFINITION  GTP-binding protein SAR1 [Gossypium hirsutum].
ACCESSION   XP_016693842
VERSION     XP_016693842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838353.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..87
                     /product="GTP-binding protein SAR1"
                     /calculated_mol_wt=10036
     Region          1..>51
                     /region_name="SAR"
                     /note="Sar1p-like members of the Ras-family of small
                     GTPases; smart00178"
                     /db_xref="CDD:197556"
     Region          37..>87
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(41..42,52,57,75..76)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(55..56,59..60,62..63,67,76..77,80..81,84,86..87)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..87
                     /gene="LOC107910499"
                     /coded_by="XM_016838353.2:443..706"
                     /db_xref="GeneID:107910499"
ORIGIN      
        1 mleaskrlvq hqptqnptlk elsigmikfk afdlgghqia rrvwkdyyak vrrekiserm
       61 kylqdlvpgy nkitgkagml neiinyv
//
LOCUS       XP_040944326              87 aa            linear   PLN 06-AUG-2024
DEFINITION  GTP-binding protein SAR1 [Gossypium hirsutum].
ACCESSION   XP_040944326
VERSION     XP_040944326.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088392.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..87
                     /product="GTP-binding protein SAR1"
                     /calculated_mol_wt=10036
     Region          1..>51
                     /region_name="SAR"
                     /note="Sar1p-like members of the Ras-family of small
                     GTPases; smart00178"
                     /db_xref="CDD:197556"
     Region          37..>87
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(41..42,52,57,75..76)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(55..56,59..60,62..63,67,76..77,80..81,84,86..87)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..87
                     /gene="LOC107910499"
                     /coded_by="XM_041088392.1:822..1085"
                     /db_xref="GeneID:107910499"
ORIGIN      
        1 mleaskrlvq hqptqnptlk elsigmikfk afdlgghqia rrvwkdyyak vrrekiserm
       61 kylqdlvpgy nkitgkagml neiinyv
//
LOCUS       XP_016693843              87 aa            linear   PLN 06-AUG-2024
DEFINITION  GTP-binding protein SAR1 [Gossypium hirsutum].
ACCESSION   XP_016693843
VERSION     XP_016693843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..87
                     /product="GTP-binding protein SAR1"
                     /calculated_mol_wt=10036
     Region          1..>51
                     /region_name="SAR"
                     /note="Sar1p-like members of the Ras-family of small
                     GTPases; smart00178"
                     /db_xref="CDD:197556"
     Region          37..>87
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(41..42,52,57,75..76)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(55..56,59..60,62..63,67,76..77,80..81,84,86..87)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..87
                     /gene="LOC107910499"
                     /coded_by="XM_016838354.2:343..606"
                     /db_xref="GeneID:107910499"
ORIGIN      
        1 mleaskrlvq hqptqnptlk elsigmikfk afdlgghqia rrvwkdyyak vrrekiserm
       61 kylqdlvpgy nkitgkagml neiinyv
//
LOCUS       XP_016693840             701 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693840
VERSION     XP_016693840.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838351.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693840.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..701
                     /product="uncharacterized protein"
                     /calculated_mol_wt=81096
     Region          380..687
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
     CDS             1..701
                     /gene="LOC107910498"
                     /coded_by="XM_016838351.2:393..2498"
                     /db_xref="GeneID:107910498"
ORIGIN      
        1 maqyrqqhqy sngttsdhva igvrggagnk aarwrrsgra drsrrisigs lifvlplvfl
       61 vtvlvyyyis adnnenrrel iryqpedddl kadsdfltnv trmenfkiln fgngsvahgr
      121 dsrywdrddr rrdddyneda vehnimdsrd kpldgghvpm kvknkkgasl dsdrgldrrv
      181 vglyneagrn elkmyeaeye aslkngdksk kelgnshqls dskdfgihne idddddhynd
      241 sidsndsrke dyddfghdkd yildeakshd envnesttsf naktnnehvv kevkeessls
      301 reasqdfddv dadshhagsl ghksgknlrs sskkkprrrk fsgscemklm nsthlvepve
      361 srkfarfslq ykqmeekpeg edqwvprfag hqslqerges flardqkinc gfvkgpqgyp
      421 stgfdlaedd vnyisrchia viscifgnsd rlrtpagkmv trssrknvcf vmfvdeatmq
      481 tvysegqtpd ggfiglwkiv vvknlpytdm rrvgkipkll phrlfpfary siwldsklrl
      541 qrdplqlldy flwrkgheya isnhydrhcv weevaqnkkl nkynhtvide qfdfyqadgl
      601 krfdasdpnk llpsnvpegs fivrahtpms nlfsclwfne verftprdql sfaytyqklr
      661 rtnpdkpfyl nmfkdcerra vaklfrhrsd ekrnvqqrat l
//
LOCUS       XP_016693838             492 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693838
VERSION     XP_016693838.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838349.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693838.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..492
                     /product="MLO-like protein 1 isoform X1"
                     /calculated_mol_wt=56454
     Region          5..475
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..492
                     /gene="LOC107910497"
                     /coded_by="XM_016838349.2:184..1662"
                     /db_xref="GeneID:107910497"
ORIGIN      
        1 mseggttiey tptwvvavvc svivfislva erilhffgky lkkknqkplf ealqkikeel
       61 mllgfislll tvfqdriaki cisedlahqw lpckekkevt iehfqtlfss flpngngrrv
      121 laepadstay cttkgkvpll sntalhhlhi fifvlavvhv tfsaltivfg stkihqwknw
      181 edyakdmedd pegvvktkit qvqehdfikg rflgigknse iqgwvysffk qfygsvtksd
      241 yitlrlgfim thcrgnpkfn fhnymmrale adfkkvvgis wylwafvaif lllnfvgwht
      301 yfwiafipfi lllavgtkle hiitqlaqev aerhmvvtge lvvqpsdnhf wfnrprlvlr
      361 lihiilfqns femaffawiw vqygfnscmm gqvrfiiprl vigvfvqfvc systlplyaf
      421 vtqmgssykk aifeehiqeg lvgwarkark knkgsgfkrp snessqvgpk eesplvfemd
      481 kvngkessss av
//
LOCUS       XP_016693839             479 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693839
VERSION     XP_016693839.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838350.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693839.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..479
                     /product="MLO-like protein 1 isoform X2"
                     /calculated_mol_wt=55009
     Region          5..462
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..479
                     /gene="LOC107910497"
                     /coded_by="XM_016838350.2:187..1626"
                     /db_xref="GeneID:107910497"
ORIGIN      
        1 mseggttiey tptwvvavvc svivfislva erilhffgky lkkknqkplf ealqkikevf
       61 qdriakicis edlahqwlpc kekkevtieh fqtlfssflp ngngrrvlae padstayctt
      121 kgkvpllsnt alhhlhifif vlavvhvtfs altivfgstk ihqwknwedy akdmeddpeg
      181 vvktkitqvq ehdfikgrfl gigknseiqg wvysffkqfy gsvtksdyit lrlgfimthc
      241 rgnpkfnfhn ymmraleadf kkvvgiswyl wafvaiflll nfvgwhtyfw iafipfilll
      301 avgtklehii tqlaqevaer hmvvtgelvv qpsdnhfwfn rprlvlrlih iilfqnsfem
      361 affawiwvqy gfnscmmgqv rfiiprlvig vfvqfvcsys tlplyafvtq mgssykkaif
      421 eehiqeglvg warkarkknk gsgfkrpsne ssqvgpkees plvfemdkvn gkessssav
//
LOCUS       XP_016693837             490 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Gossypium hirsutum].
ACCESSION   XP_016693837
VERSION     XP_016693837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838348.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="protein SENSITIVE TO PROTON RHIZOTOXICITY 1"
                     /calculated_mol_wt=54506
     Region          249..271
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          251..271
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(256,258,260,262..263,266..267,270,312,314,319..320,
                     325..326,330,344,346,348,350..351,354..355)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          300..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          338..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..490
                     /gene="LOC107910495"
                     /coded_by="XM_016838348.2:791..2263"
                     /db_xref="GeneID:107910495"
ORIGIN      
        1 mdhrdrqsie hqkkdpqqhp hpcftnftth hqqqkwedps lldystriep pfqafnpncq
       61 tkssfpcnpn nqikvpdpim nellqaskvq dwdpsamlnn lsfleqkihq lqglvhsiig
      121 rggqvlgqpd elvdqqqqli taaltsiivq listagsllp svkhhtlcga ppvaslaqfq
      181 pqngggnsvt elpntvdvss nsgeqqnhvm eehemkdeed aeelgenlfp gtyeilqlek
      241 eeilaphthf cticgkgfkr danlrmhmrg hgdeyktpaa lakpnkesss epalikrysc
      301 pfagckrnkd hkkfqplkti lcvknhykrs hcdksyicsr chtkkfsvia dlkthekhcg
      361 kdkwlcscgt tfsrkdklfg hialfqghtp aipldetkgp iapsdpgdgs eatnvvgsmn
      421 ffnfgsengv dvkcslddpa ayfsplnfet cnfggfhefp rpasddsets lafllsgtcs
      481 ynnnndvers
//
LOCUS       XP_016691031             458 aa            linear   PLN 06-AUG-2024
DEFINITION  GRAS family protein RAM1 [Gossypium hirsutum].
ACCESSION   XP_016691031
VERSION     XP_016691031.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835542.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691031.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..458
                     /product="GRAS family protein RAM1"
                     /calculated_mol_wt=52290
     Region          84..455
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..458
                     /gene="LOC107908366"
                     /coded_by="XM_016835542.2:424..1800"
                     /db_xref="GeneID:107908366"
ORIGIN      
        1 mvmedkdeee ehlnlslaiv tdpneensrk rkrkllnvcn plnpshegyf egkifkllqv
       61 reemlkldhk rskglaengk glhlihslli iatsvdknnm nsalenliql yptvtlmgds
      121 vqrvvahfad glfariltpk spfydmvmke ptteqqflaf tslyrvspyy qfahftvnqa
      181 iieafekdqe tnnnralhvi dfnvsygfqw psliqsvsqs gkrvslrltg ygrsleelqe
      241 tearlvsfak gfcnlvfefq gllrssskli inqrekknet vavnlvfhls nfmemsqtlk
      301 svhslkpsiv ilveqegnpr vrnflsrfme slhyvaamfd slddclpqes terlsiernh
      361 lgkeikamin senldeenkg twknmmerhg fggmklsskc liqaklllkv rthnycplpc
      421 egentnggfr vfqrdegkal slgwqdrcll tasawqcv
//
LOCUS       XP_016693836             585 aa            linear   PLN 06-AUG-2024
DEFINITION  embryogenesis-associated protein EMB8 [Gossypium hirsutum].
ACCESSION   XP_016693836
VERSION     XP_016693836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838347.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..585
                     /product="embryogenesis-associated protein EMB8"
                     /calculated_mol_wt=65390
     Region          84..440
                     /region_name="PLN02511"
                     /note="hydrolase"
                     /db_xref="CDD:215282"
     CDS             1..585
                     /gene="LOC107910493"
                     /coded_by="XM_016838347.2:253..2010"
                     /db_xref="GeneID:107910493"
ORIGIN      
        1 mfspnfsqmd wsiswdesyl naykevfral clipilhyvi afmviwvvfl ynflefhffq
       61 dffsgfrgap valtfhptsh iyhgvvskck ilhgrylatp wlssphfqtt flnffgnppa
      121 fsyrrqlfha sdggtialdw ltssdisrga fevnhtiske dttplvvvip gltsdstssy
      181 ikhlafglak hgwnvvvsnh rglggvsits dcfynagwte darvvidylh hqypkaplfa
      241 igtsiganil vkylgedrek vpvagavaic spwdlligdr ficrrllqkl ydraltiglq
      301 gyaklhepcy srlanwegik ksrsirdfdn fatcfvgkfe tvdtyyrrst stpyvlnvsv
      361 pllcisaldd pvctreaipw decrankniv latikhgghl affegitgsr lwwvratdef
      421 lgvlhssshm hkkkteiteq kasiessidq gpyvnvgedg mvaavgsaha gnksvehftg
      481 lgsiqdktvl gteqtqqqte aksdvagsgg evsgecsslq rikcfdviaa skrwlnhllf
      541 rkngksvwll vyiaiitswp ilgsalrifs rkklrnfsaa tshrr
//
LOCUS       XP_016693835             494 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose transport protein SUC2 [Gossypium hirsutum].
ACCESSION   XP_016693835
VERSION     XP_016693835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..494
                     /product="sucrose transport protein SUC2"
                     /calculated_mol_wt=52490
     Region          11..481
                     /region_name="GPH_sucrose"
                     /note="GPH family sucrose/H+ symporter; TIGR01301"
                     /db_xref="CDD:273545"
     CDS             1..494
                     /gene="LOC107910491"
                     /coded_by="XM_016838346.2:332..1816"
                     /db_xref="GeneID:107910491"
ORIGIN      
        1 mengyinpap splrkiitva siaagiqfgw alqlslltpy vqtlgvphaw aafiwlcgpi
       61 sgllvqpivg ynsdrctsrf grrrpfivig alsvsiavfl igfakdighh agdslerstk
      121 pravaifvvg fwildvannm lqgpcralla dlsandhkkm rtangwfsff mavgnvlgya
      181 agsyshlyki fpftkttacd iycanlkscf tidimilllv tvtavttvke dpftkqiqdd
      241 gskestpfig emmaafkslk kpmwilllvt clnwiawfpf llfdtdwmgk eiyggeakgd
      301 ahkvklygdg vragalglmi nsivlgltsl glepagrlig gvknlwaivn filcaclast
      361 vlitkmaeaw rqhhgsplsh ppfnitgsal avfgvlgipl avtysipfal asiycsstgg
      421 gqglslgvln lsivipqmfv svisgpldda fgggnlpafv lgsiaaavsa llailalpnp
      481 pkqvslspgm gggh
//
LOCUS       XP_016693834             494 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose transport protein SUC2 [Gossypium hirsutum].
ACCESSION   XP_016693834
VERSION     XP_016693834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..494
                     /product="sucrose transport protein SUC2"
                     /calculated_mol_wt=52490
     Region          11..481
                     /region_name="GPH_sucrose"
                     /note="GPH family sucrose/H+ symporter; TIGR01301"
                     /db_xref="CDD:273545"
     CDS             1..494
                     /gene="LOC107910491"
                     /coded_by="XM_016838345.2:531..2015"
                     /db_xref="GeneID:107910491"
ORIGIN      
        1 mengyinpap splrkiitva siaagiqfgw alqlslltpy vqtlgvphaw aafiwlcgpi
       61 sgllvqpivg ynsdrctsrf grrrpfivig alsvsiavfl igfakdighh agdslerstk
      121 pravaifvvg fwildvannm lqgpcralla dlsandhkkm rtangwfsff mavgnvlgya
      181 agsyshlyki fpftkttacd iycanlkscf tidimilllv tvtavttvke dpftkqiqdd
      241 gskestpfig emmaafkslk kpmwilllvt clnwiawfpf llfdtdwmgk eiyggeakgd
      301 ahkvklygdg vragalglmi nsivlgltsl glepagrlig gvknlwaivn filcaclast
      361 vlitkmaeaw rqhhgsplsh ppfnitgsal avfgvlgipl avtysipfal asiycsstgg
      421 gqglslgvln lsivipqmfv svisgpldda fgggnlpafv lgsiaaavsa llailalpnp
      481 pkqvslspgm gggh
//
LOCUS       XP_040944329             652 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSK SIMULATOR 1 [Gossypium hirsutum].
ACCESSION   XP_040944329
VERSION     XP_040944329.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088395.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..652
                     /product="protein PSK SIMULATOR 1"
                     /calculated_mol_wt=72559
     Region          162..218
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          383..466
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..652
                     /gene="LOC107910489"
                     /coded_by="XM_041088395.1:316..2274"
                     /db_xref="GeneID:107910489"
ORIGIN      
        1 mgglcsrrst vdnapvggfp hvnghfargs rlvfqtrqlp akistnsapp aedsadnagm
       61 esrepfsfpe istvpycmnp agiddgiprl srvlsnksrs tkskqaavak vtevgsllgr
      121 agtagfgkav dvldtlgssm tnlnlgsgft sgvttkgnki silsfevant ivkganlmqs
      181 lsmenirhlk emvlksegvq nlisrdmdel lriaaadkre elkifsgevv rfgnrckdpq
      241 whnldryfek lgseltfekq lkeeaetimq qlmtyvhyta elyhelhald rfeqdyrrkl
      301 qeednsntaq rgdslailra elksqnkhvk nlkkkslwsr ileevmeklv divhflhlei
      361 heafgaadgd kpvkgsvssh kklgtaglal hyaniitqid tlvsrsnsvp pntrdslyqg
      421 lpptiksalr srlqsfqlke eltvpqikae mektlqwlvp iatnttkahh gfgwvgewan
      481 tgsemnrkpa gqtnllriet lhhadkekte vyildlvvwl hhlvtqvrag nggirspvks
      541 pirspnqktv qlstqkqsps smltvedqem lrdvskrkka pgisksqefd taktklikhh
      601 rlskstshsp tseskkdpfl irrlssvpfi dfdinrikal dvidrvdtlr sl
//
LOCUS       XP_016693833             148 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 22b [Gossypium
            hirsutum].
ACCESSION   XP_016693833
VERSION     XP_016693833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838344.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..148
                     /product="mediator of RNA polymerase II transcription
                     subunit 22b"
                     /calculated_mol_wt=16076
     Region          28..124
                     /region_name="Med22"
                     /note="Surfeit locus protein 5 subunit 22 of Mediator
                     complex; pfam06179"
                     /db_xref="CDD:461845"
     CDS             1..148
                     /gene="LOC107910490"
                     /coded_by="XM_016838344.2:96..542"
                     /db_xref="GeneID:107910490"
ORIGIN      
        1 mnkgtgagtg ptaaaaaaaa qkqktmmqrv etdianivdn ftqlvnvarv ndppvrnsqe
       61 sfmmemraar mvqaadsllk lvselkqtai fsgfaslndh veqrttefnq qaertdrmla
      121 rigeeaaasl keleshyyss aqrthdta
//
LOCUS       XP_016693831             852 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g34300 [Gossypium hirsutum].
ACCESSION   XP_016693831
VERSION     XP_016693831.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838342.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693831.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..852
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g34300"
                     /calculated_mol_wt=92581
     Site            order(37,63,71..72,114,116,123,125,127,129..151)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(55,58,60,62,64,98,100,102,104,106,129,131,133,135,
                     137)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          90..161
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cl24013"
                     /db_xref="CDD:474126"
     Region          <224..314
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          503..771
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(503..507,511,523,525,553,569..572,576,578,623,625,
                     627..628,630,641,644,663..666)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(503..507,511,523,525,553,569..572,576,623,625,
                     627..628,630,641)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(507,576,578,623,625,627,644,663..666)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(640..647,659..666)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..852
                     /gene="LOC107910488"
                     /coded_by="XM_016838342.2:91..2649"
                     /db_xref="GeneID:107910488"
ORIGIN      
        1 mskfslilly lnflftisss stliplgstl qasnrnqsws spntsfslsf ipvtpssfva
       61 aitynagdvi vwsasdgsng tgdgaslvvn sggtlnllsn galrltngsg aivwdsatan
      121 rgvshasldd lgnfqllnne svqiwssfqn ptdtlvpsqn ftvgmilrsg sysltldrsa
      181 nltlnwndti eywslgfnss ingnltsprf mlqsngilvg ldpsfargmi nmafttdyge
      241 sndvfrflrm dndgnlriys sstgnngsgn itqtwaavtd qcqvygfcgn mgicsykdsk
      301 pvcgcpsqnf epvnehdgrk gckrkveied cpgdvtmlql ehtmfltypp elsdqlvtla
      361 ivacrtncla sstctastlv adgsgfcylk tpdlvsgyqg avlpstsfik vcgqaipnps
      421 pyqeasakdn dslhtmvivs vvmasllalv vvgigfwcll ysnrnksgrm svqyelvdya
      481 sgapvkfsyk elqqstkgfs erlgeggfga vykgtlanrm vvavkqlegi eqgerqfrme
      541 vatissthhl nlvrlvgfcc egrhrllvye flkngsldkf lftskdqsgk slkwenrfni
      601 algtargity lheecrdcii hcdikpenil ldegytakvs dfglarlmnp kdhrhlslas
      661 irgtrgylap ewlanhpits kcdvysygmv lleivsgrrn fevspetdgk kfslwaysef
      721 ekghieaivd krikdvdske vgraimvsfw ciqeqpsrrp mmgkvvqmle gvididsppa
      781 pkpavegssr gttitvnsnv sglstyaast papsssssfm nigpspptpe temgkesssl
      841 lglkrsetdp ds
//
LOCUS       XP_040944331             844 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At1g34300 [Gossypium hirsutum].
ACCESSION   XP_040944331
VERSION     XP_040944331.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088397.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..844
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At1g34300"
                     /calculated_mol_wt=91828
     Site            order(39,66,73..74,116,118,125,127,129,131..153)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(58,61,63,65,67,100,102,104,106,108,131,133,135,137,
                     139)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          92..163
                     /region_name="B_lectin"
                     /note="Bulb-type mannose-specific lectin. The domain
                     contains a three-fold internal repeat (beta-prism
                     architecture). The consensus sequence motif QXDXNXVXY is
                     involved in alpha-D-mannose recognition. Lectins are
                     carbohydrate-binding proteins which specifically...;
                     cl24013"
                     /db_xref="CDD:474126"
     Region          503..771
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(503..507,511,523,525,553,569..572,576,578,623,625,
                     627..628,630,641,644,663..666)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(503..507,511,523,525,553,569..572,576,623,625,
                     627..628,630,641)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(507,576,578,623,625,627,644,663..666)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(640..647,659..666)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..844
                     /gene="LOC107910486"
                     /coded_by="XM_041088397.1:174..2708"
                     /db_xref="GeneID:107910486"
ORIGIN      
        1 mkmsklsffl lylhclfais ssstiiplgs tlqasnrnqs wsspnasfsl sfvpvtpssf
       61 maaityyagd vivwsasngs ngtgdgaslv vdsggtlnll psgalrltng sgavvwdsat
      121 anrgvshasi ddlgnfqlln nesapiwssf qnptdtlvps qnftvgkilr sgsysltlgr
      181 sgnltlnwng tieywslgfn ssingnltsp rfmlqsngil vgldpsfarg minmaystdy
      241 gegddvfrfl rmdndgnlri ystsessgni tptwaavtdq cqvygfcgnm gvcgykdsnp
      301 vcgcpsqnfy pvdehdgrkg crrkveiedc pgdvtmlqle htkfltyppe vndqtfivgt
      361 vacrmnclvs gscigstlva dgsgicymkt tdfisgyqga vlpstsflkv cgqavpnpss
      421 yldtsgkdnd srlhamviiv vvlvtllslf aivtgfwcwf yggseksrri saqyelvdya
      481 sgapvkfsyk elqqstkafs erlgeggfga vykgtlgnrm vvavkqlegi eqgemqfrme
      541 vatissthhl nlvrlvgfcs dgrhrllvye flrngsldkf lftsndqsgk lltwenrfni
      601 algtgrgity lheecrdcii hcdikpenil ldegytakvs dfglaklmkp kdhrhlslas
      661 irgtrgylap ewlanhplts kcdvysygmv lleivsgrrn fevspetdgk kfslwaysef
      721 ekghieaivd krikdvdsee veraimvsfw ciqeqpsqrp mmgkvvqmle gvidiemppa
      781 pklvaeglss gttmtvnsdv sglstyaasn papsssssfm nigaspptpe remgkesssl
      841 lgsk
//
LOCUS       XP_040944332             101 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L30 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944332
VERSION     XP_040944332.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088398.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..101
                     /product="60S ribosomal protein L30 isoform X1"
                     /calculated_mol_wt=11267
     Region          2..>76
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     cl00600"
                     /db_xref="CDD:469835"
     CDS             1..101
                     /gene="LOC107910485"
                     /coded_by="XM_041088398.1:328..633"
                     /db_xref="GeneID:107910485"
ORIGIN      
        1 mvaakktkkt hesinnrlal vmesgkytlg yktvvkslrs skgkliiian ncpplrksei
       61 eyyamlckvg vhhyngmkel kqvqelfsqa adnclnlkkp d
//
LOCUS       XP_040944333              77 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L30 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944333
VERSION     XP_040944333.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088399.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..77
                     /product="60S ribosomal protein L30 isoform X2"
                     /calculated_mol_wt=8481
     Region          2..>77
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     cl00600"
                     /db_xref="CDD:469835"
     CDS             1..77
                     /gene="LOC107910485"
                     /coded_by="XM_041088399.1:325..558"
                     /db_xref="GeneID:107910485"
ORIGIN      
        1 mvaakktkkt hesinnrlal vmesgkytlg yktvvkslrs skgkliiian ncpplrksei
       61 eyyamlckvg vhhyngs
//
LOCUS       XP_016693827             478 aa            linear   PLN 06-AUG-2024
DEFINITION  probable arabinosyltransferase ARAD1 [Gossypium hirsutum].
ACCESSION   XP_016693827
VERSION     XP_016693827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..478
                     /product="probable arabinosyltransferase ARAD1"
                     /calculated_mol_wt=53734
     Region          53..397
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..478
                     /gene="LOC107910483"
                     /coded_by="XM_016838338.2:203..1639"
                     /db_xref="GeneID:107910483"
ORIGIN      
        1 maikgstatk takslfltft vllslsffif fffftspvte ptnslpqtsf lssqnsikvy
       61 vanlprslny gllqqywdsn hpdsripsdp dhqistthfs kpvryppype nplikqysae
      121 ywimgdletp qgmrtasfak rvfdvneadv vfvpffatls aemelgsgsg afkkkagngd
      181 ylrqkkvldf vrntdawkrs ggrdhvfvlt dpvamwhfre eiapavllvv dfggwyrldt
      241 kssggissdt irhtqvsllk dvivpythll prlqlsenqk rhtllyfkga khrhrgglvr
      301 eklwdllvne pgvimeegfp natgreqsik gmrscefclh pagdtptscr lfdaiqslci
      361 pvivsdnvel pfegmvdyst fsvfvavsda lrpnwlvshl rsiseklkne frqtmakvqp
      421 vfvydnghpd gigpippdga vnhiwrkvhq klpaikeaiv rgkrkpants iplrchct
//
LOCUS       XP_040944335             178 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944335
VERSION     XP_040944335.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088401.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..178
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19664
     Region          18..137
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(20..23,57..58,61,85,124,138)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..178
                     /gene="LOC121214600"
                     /coded_by="XM_041088401.1:1..537"
                     /db_xref="GeneID:121214600"
ORIGIN      
        1 mrrnelwrpp magviklnfd asfasrsnss vsavlardse glimgactyp mvdiadafva
       61 earaceraiy faldmgfrkv vlegdsltvi kklvsnstdr svlcfisqhi lslagafeki
      121 tynfiprean ravhelamvg rkqkapcfwv eeapakvvev aeldrhewar rgcfgsgf
//
LOCUS       XP_016693826             215 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DMP2 [Gossypium hirsutum].
ACCESSION   XP_016693826
VERSION     XP_016693826.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693826.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..215
                     /product="protein DMP2"
                     /calculated_mol_wt=23859
     Region          44..202
                     /region_name="DUF679"
                     /note="Protein of unknown function (DUF679); pfam05078"
                     /db_xref="CDD:461544"
     CDS             1..215
                     /gene="LOC107910482"
                     /coded_by="XM_016838337.2:147..794"
                     /db_xref="GeneID:107910482"
ORIGIN      
        1 madtithdlt etlqlpnnne yyqylkedda detnfiyiin ailsgtarln vllptatilg
       61 ftifapllsn dgqctsldrw llgcflmfla ascvfftftd sfrtakgrly ygvatlsgiw
      121 tfdagrkkpc vpsdyrlrwc dlfhaglslv aflafagshg dvvacyypgi prkvtntvpl
      181 vvgfvvsvlf vvfpsrrrgi gypfllqgea rssrf
//
LOCUS       XP_016693825             116 aa            linear   PLN 06-AUG-2024
DEFINITION  protein EPIDERMAL PATTERNING FACTOR 2 [Gossypium hirsutum].
ACCESSION   XP_016693825
VERSION     XP_016693825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838336.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..116
                     /product="protein EPIDERMAL PATTERNING FACTOR 2"
                     /calculated_mol_wt=12627
     Region          67..113
                     /region_name="EPF"
                     /note="Epidermal patterning factor proteins; pfam17181"
                     /db_xref="CDD:407307"
     CDS             1..116
                     /gene="LOC107910481"
                     /coded_by="XM_016838336.2:342..692"
                     /db_xref="GeneID:107910481"
ORIGIN      
        1 mknfsfgvgg lllvsyfvll clstetllvp lhhhhannhg kattlgdlkl qqvnpeegrg
       61 melyttgssl pdcthacgac fpckrvmvsf kcsmaescpi vykcmckgky yhvpsk
//
LOCUS       XP_016693821             445 aa            linear   PLN 06-AUG-2024
DEFINITION  tRNA pseudouridine(38/39) synthase [Gossypium hirsutum].
ACCESSION   XP_016693821
VERSION     XP_016693821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..445
                     /product="tRNA pseudouridine(38/39) synthase"
                     /calculated_mol_wt=50261
     Region          104..361
                     /region_name="PseudoU_synth_ScPus3"
                     /note="Pseudouridine synthase, Saccharomyces cerevisiae
                     Pus3 like; cd02569"
                     /db_xref="CDD:211336"
     Site            order(153..156,312)
                     /site_type="active"
                     /note="probable active site [active]"
                     /db_xref="CDD:211336"
     CDS             1..445
                     /gene="LOC107910479"
                     /coded_by="XM_016838332.2:106..1443"
                     /db_xref="GeneID:107910479"
ORIGIN      
        1 mlngisesgs dvvgsfisql qafqnrvkel eaensklssq iskccchkte emqngsdves
       61 fkqgvesqrk naggdktrkk ktiernpgyd lkimthhskr yvalrvmyfg qrfygfasea
      121 qmdptvesei fkalektrll vgdrkesqys rcgrtdkgvs svgqvialfl rsnlketdgn
      181 hkisgelipe aqiegeidyv rvlnrvlpsd irilgwspvs idfsarfscl areykyffwr
      241 gnlnlsamen agkkflgehd frnfckmdaa nvhnyrrrit qfeisssnms feggqlcaik
      301 vkgsaflwhq vrcmvavlfm igqglesvdv idilldiekt prkpqyamap etplilqsce
      361 fedvkficss dsgqalrihl enegrayqlq saifqeaals clplakdqsl fndgtikkvt
      421 shisllcrpt epsyeerrgk lnsrr
//
LOCUS       XP_040944336             580 aa            linear   PLN 06-AUG-2024
DEFINITION  laccase-21 [Gossypium hirsutum].
ACCESSION   XP_040944336
VERSION     XP_040944336.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088402.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..580
                     /product="laccase-21"
                     /calculated_mol_wt=65855
     Region          24..565
                     /region_name="laccase"
                     /note="plant; TIGR03389"
                     /db_xref="CDD:274556"
     CDS             1..580
                     /gene="LOC121214603"
                     /coded_by="XM_041088402.1:321..2063"
                     /db_xref="GeneID:121214603"
ORIGIN      
        1 mgvepacpvl llflagiiiw vveaevhyyd fvlaeknftr lcktksmlvv ngqfpgptiy
       61 vhkgdtvfvn vhnhgdyglt vhwhgvkqpr npwsdgsayi tqcpiepghn ftyevvfsee
      121 egtlwwhans dwtrntvhga iviypphgfs ypfptpageq ililgtwfty dvnkvikeil
      181 rtgkdvpvsd ayiingqpgd fcacskemay rwqvdygkty lirlvnalmn eefffaiagh
      241 dlivvgidgs ylkpfttsyv mlsngqtmdv lvktnrspgr yymagrqyyt dnlfftgydk
      301 tnasaileyr gkydrlsspf fpeklpsytd ydsatqfrkr lkslaskehp idvprnvttq
      361 myitasmdki vhnfsaymdy tllsslnnis wvnpstdvlq ayyrnlsgfy tldfldeppy
      421 yfdfvadlrd dsthplkgtk vkvleyseev eivfqstnll nasdehsmyi hghkfyvlge
      481 gygnfnstrd tetynlvdpp ylstaslpvk gwltirfkan npgvwamhcq egrhliwgmn
      541 tvlivkngsn petsirtppp nmpscasyps ihkalevsae
//
LOCUS       XP_016693817             205 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein Rab7 [Gossypium hirsutum].
ACCESSION   XP_016693817
VERSION     XP_016693817.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693817.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="ras-related protein Rab7"
                     /calculated_mol_wt=23027
     Region          9..182
                     /region_name="Rab7"
                     /note="Rab GTPase family 7 (Rab7); cd01862"
                     /db_xref="CDD:206655"
     Site            9..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206655"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206655"
     Site            order(17..23,33,35,40,66,125..126,128,158..160)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206655"
     Site            order(17,42,44..45,63,67,69..72,75..76,79)
                     /site_type="active"
                     /note="GDI interaction site [active]"
                     /db_xref="CDD:206655"
     Site            order(23..34,36..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206655"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206655"
     Site            order(38,42..49,56,58)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206655"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206655"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,176)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206655"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206655"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206655"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206655"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206655"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206655"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206655"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206655"
     Site            117..122
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206655"
     Site            125..128
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206655"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206655"
     Site            174..182
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206655"
     CDS             1..205
                     /gene="LOC107910477"
                     /coded_by="XM_016838328.2:96..713"
                     /db_xref="GeneID:107910477"
ORIGIN      
        1 msmrrrtllk vivlgdsgvg ktslmnqyvh mkftqqykat igadfvtkel qiddrdvtlq
       61 mwdtagqerf qslgvafyrg adccvlvydv nvmksfdsld nwheeflkqa nptdprtfpf
      121 illgnkidvd ggntrvvsek kakdwcaske nipyfetsak edinveaafh ciaktalane
      181 reqdiyfqgi pdavseteqr ggcac
//
LOCUS       XP_040944337             550 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PIGMENT DEFECTIVE 338, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040944337
VERSION     XP_040944337.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088403.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..550
                     /product="protein PIGMENT DEFECTIVE 338, chloroplastic"
                     /calculated_mol_wt=62474
     Region          <305..532
                     /region_name="PRK07400"
                     /note="30S ribosomal protein S1; Reviewed"
                     /db_xref="CDD:180960"
     CDS             1..550
                     /gene="LOC121214605"
                     /coded_by="XM_041088403.1:16..1668"
                     /db_xref="GeneID:121214605"
ORIGIN      
        1 msrvsktllt ereitkenrr kqrekessrg asrirrmqtl lqpckslsfl nfssqyfafn
       61 gapkwqysvk rtcysitaag tpkalsfsrk ymflrstqiv lcsqndtfde fsstqfperf
      121 endsgieene elellnkpsp apvnngfvsd vdkesekpdk eevlepflkf frpsepleve
      181 eggeledsee kidevkkvgv eyyepkpgdl vvgvvvsgne nkldvnvgad mlgtmltkdv
      241 lplydkemdy lvcdlenkae efmvygkmgi vkdddamsgg pgpgrpvvet gtvlfaevlg
      301 rtlsgrplls trqlfrriaw hrvrqikhln epievkftew ntgglltrie glraflpkae
      361 lmkrvnnfse lkgyvgrrmh vkvtrinean ndlilserea wemmhlrdgt lvegtvvkil
      421 pygaqvriad snrsgllhis nmsksritsv aellkedekv kvlvvkslfp dkislstael
      481 esepglfiln kervfseaee makkyrqslp avsaprntep lpadalsfen eeslyanwkw
      541 fkfereness
//
LOCUS       XP_040944338             281 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944338
VERSION     XP_040944338.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088404.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..281
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=32345
     Region          8..>80
                     /region_name="MRNIP"
                     /note="MRN-interacting protein; pfam15749"
                     /db_xref="CDD:464843"
     CDS             1..281
                     /gene="LOC121203134"
                     /coded_by="XM_041088404.1:79..924"
                     /db_xref="GeneID:121203134"
ORIGIN      
        1 mptanfvalq ccqcftmqvk qrkkssnkwt cvvcnqkqsv lkvfaqgpma kdvrkfvqsf
       61 nmtrkftdqn qlfdptseyd idledddggd lenpkkrhtd wteyldsedh hehklvlqed
      121 eqgvdlepei vtelpakekf krpklrnsdt geegvghqly kpllykrncr katmlfsqde
      181 kadrqqqadg digskkqsdl tirkvgeile smrnskpats kvnskwkdyi teedegdsle
      241 qccprnsany mdkwgnadda vlntdsikyq iveddihpdf m
//
LOCUS       XP_040944339             289 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944339
VERSION     XP_040944339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088405.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=33200
     Region          8..>80
                     /region_name="MRNIP"
                     /note="MRN-interacting protein; pfam15749"
                     /db_xref="CDD:464843"
     CDS             1..289
                     /gene="LOC121203134"
                     /coded_by="XM_041088405.1:79..948"
                     /db_xref="GeneID:121203134"
ORIGIN      
        1 mptanfvalq ccqcftmqvk qrkkssnkwt cvvcnqkqsv lkvfaqgpma kdvrkfvqsf
       61 nmtrkftdqn qlfdptseyd idledddggd lenpkkrhtd wteyldsedh hehklvlqed
      121 eqgvdlepei vtelpakekf krpklrnsdt geegvghqly kpllykrncr katmlfsqgn
      181 nnnnnideka drqqqadgdi gskkqsdlti rkvgeilesm rnskpatskv nskwkdyite
      241 edegdsleqc cprnsanymd kwgnaddavl ntdsikyqiv eddihpdfm
//
LOCUS       XP_016693808             217 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693808
VERSION     XP_016693808.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838319.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693808.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like isoform X1"
                     /calculated_mol_wt=24633
     Region          88..171
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..217
                     /gene="LOC107910473"
                     /coded_by="XM_016838319.2:1747..2400"
                     /db_xref="GeneID:107910473"
ORIGIN      
        1 msfldfgvnl lfpniandim kmidknlhcl fneyssnagr ielfegrssf stnhcnsmki
       61 dqskmktgla kqkylkkkkq vgleskseld rylgedeevn dsssfdlllw wkmntlrfpi
      121 laqmardila ipistvases afstdgrvld sfrssltpvm vealvctqdw lrksngvinl
      181 edyfdelqtm eddlskiped qenvsrlstv feaqeka
//
LOCUS       XP_016693809             217 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693809
VERSION     XP_016693809.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693809.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like isoform X1"
                     /calculated_mol_wt=24633
     Region          88..171
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..217
                     /gene="LOC107910473"
                     /coded_by="XM_016838320.2:2047..2700"
                     /db_xref="GeneID:107910473"
ORIGIN      
        1 msfldfgvnl lfpniandim kmidknlhcl fneyssnagr ielfegrssf stnhcnsmki
       61 dqskmktgla kqkylkkkkq vgleskseld rylgedeevn dsssfdlllw wkmntlrfpi
      121 laqmardila ipistvases afstdgrvld sfrssltpvm vealvctqdw lrksngvinl
      181 edyfdelqtm eddlskiped qenvsrlstv feaqeka
//
LOCUS       XP_016693810             217 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693810
VERSION     XP_016693810.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838321.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693810.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like isoform X1"
                     /calculated_mol_wt=24633
     Region          88..171
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..217
                     /gene="LOC107910473"
                     /coded_by="XM_016838321.2:1753..2406"
                     /db_xref="GeneID:107910473"
ORIGIN      
        1 msfldfgvnl lfpniandim kmidknlhcl fneyssnagr ielfegrssf stnhcnsmki
       61 dqskmktgla kqkylkkkkq vgleskseld rylgedeevn dsssfdlllw wkmntlrfpi
      121 laqmardila ipistvases afstdgrvld sfrssltpvm vealvctqdw lrksngvinl
      181 edyfdelqtm eddlskiped qenvsrlstv feaqeka
//
LOCUS       XP_040944340             217 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944340
VERSION     XP_040944340.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088406.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like isoform X1"
                     /calculated_mol_wt=24633
     Region          88..171
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..217
                     /gene="LOC107910473"
                     /coded_by="XM_041088406.1:1747..2400"
                     /db_xref="GeneID:107910473"
ORIGIN      
        1 msfldfgvnl lfpniandim kmidknlhcl fneyssnagr ielfegrssf stnhcnsmki
       61 dqskmktgla kqkylkkkkq vgleskseld rylgedeevn dsssfdlllw wkmntlrfpi
      121 laqmardila ipistvases afstdgrvld sfrssltpvm vealvctqdw lrksngvinl
      181 edyfdelqtm eddlskiped qenvsrlstv feaqeka
//
LOCUS       XP_016693812             207 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693812
VERSION     XP_016693812.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838323.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693812.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..207
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like isoform X2"
                     /calculated_mol_wt=23479
     Region          88..171
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..207
                     /gene="LOC107910473"
                     /coded_by="XM_016838323.2:1747..2370"
                     /db_xref="GeneID:107910473"
ORIGIN      
        1 msfldfgvnl lfpniandim kmidknlhcl fneyssnagr ielfegrssf stnhcnsmki
       61 dqskmktgla kqkylkkkkq vgleskseld rylgedeevn dsssfdlllw wkmntlrfpi
      121 laqmardila ipistvases afstdgrvld sfrssltpvm vealvctqdw lrksngvinl
      181 edyfdelqtm eddvsrlstv feaqeka
//
LOCUS       XP_040944341             207 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger BED domain-containing protein RICESLEEPER 2-like
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944341
VERSION     XP_040944341.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088407.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..207
                     /product="zinc finger BED domain-containing protein
                     RICESLEEPER 2-like isoform X2"
                     /calculated_mol_wt=23479
     Region          88..171
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..207
                     /gene="LOC107910473"
                     /coded_by="XM_041088407.1:1742..2365"
                     /db_xref="GeneID:107910473"
ORIGIN      
        1 msfldfgvnl lfpniandim kmidknlhcl fneyssnagr ielfegrssf stnhcnsmki
       61 dqskmktgla kqkylkkkkq vgleskseld rylgedeevn dsssfdlllw wkmntlrfpi
      121 laqmardila ipistvases afstdgrvld sfrssltpvm vealvctqdw lrksngvinl
      181 edyfdelqtm eddvsrlstv feaqeka
//
LOCUS       XP_016693803             663 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693803
VERSION     XP_016693803.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693803.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..663
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X1"
                     /calculated_mol_wt=76208
     Region          27..644
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(469,520,621)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..663
                     /gene="LOC107910472"
                     /coded_by="XM_016838314.2:381..2372"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse rswaeiccfc cfciqhfwps afmrkllnit prgsdysadt eeeddvgsds
       61 eteeffecsh grvsrfkesr eeeppsdlnd nitrirrrrr ksetfraqyi dskeiricvg
      121 twnvggkvpp ddldiddwid thepadiyvl glqeivplna gnifgaedsr pvpkweniir
      181 ealnrirpaa tkvkcysdpp spskfepsdd vrnldeeisl esdsdigeei ypldeeplgf
      241 defnnaaesk tlftnsgvse cndgskldvp veqdlqrqfs spkkldrlnc lrmegyaenv
      301 eapvsqqnak ftrmlsgiqq ngkltrilsg teriglswpe pplnllsqhv ldrpasfksv
      361 ksfratksfr tyssfrsind masgiallae ldleslmkrk rrssyvrivs kqmvgiflti
      421 wvrrslrkhi qnlkvstvgv gvmgyignkg sisvsmsiyq tlfcficthl tsgekdgdel
      481 krnsdvheil rrthfhsrsa iglpksihdh ekiiwfgdln yrlnlsydka rdfiskrews
      541 klierdqlvr elqkgrtfdg wsegalnfap tykyelnskk yygedpkigr ripawcdril
      601 srgkgmrqls yrrteqklsd hrpvtaiyma evevfcpkkl qraliytnae ieneeveaed
      661 fdy
//
LOCUS       XP_016693805             663 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693805
VERSION     XP_016693805.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693805.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..663
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X1"
                     /calculated_mol_wt=76208
     Region          27..644
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(469,520,621)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..663
                     /gene="LOC107910472"
                     /coded_by="XM_016838316.2:381..2372"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse rswaeiccfc cfciqhfwps afmrkllnit prgsdysadt eeeddvgsds
       61 eteeffecsh grvsrfkesr eeeppsdlnd nitrirrrrr ksetfraqyi dskeiricvg
      121 twnvggkvpp ddldiddwid thepadiyvl glqeivplna gnifgaedsr pvpkweniir
      181 ealnrirpaa tkvkcysdpp spskfepsdd vrnldeeisl esdsdigeei ypldeeplgf
      241 defnnaaesk tlftnsgvse cndgskldvp veqdlqrqfs spkkldrlnc lrmegyaenv
      301 eapvsqqnak ftrmlsgiqq ngkltrilsg teriglswpe pplnllsqhv ldrpasfksv
      361 ksfratksfr tyssfrsind masgiallae ldleslmkrk rrssyvrivs kqmvgiflti
      421 wvrrslrkhi qnlkvstvgv gvmgyignkg sisvsmsiyq tlfcficthl tsgekdgdel
      481 krnsdvheil rrthfhsrsa iglpksihdh ekiiwfgdln yrlnlsydka rdfiskrews
      541 klierdqlvr elqkgrtfdg wsegalnfap tykyelnskk yygedpkigr ripawcdril
      601 srgkgmrqls yrrteqklsd hrpvtaiyma evevfcpkkl qraliytnae ieneeveaed
      661 fdy
//
LOCUS       XP_016693804             663 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693804
VERSION     XP_016693804.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693804.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..663
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X1"
                     /calculated_mol_wt=76208
     Region          27..644
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(469,520,621)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..663
                     /gene="LOC107910472"
                     /coded_by="XM_016838315.2:305..2296"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse rswaeiccfc cfciqhfwps afmrkllnit prgsdysadt eeeddvgsds
       61 eteeffecsh grvsrfkesr eeeppsdlnd nitrirrrrr ksetfraqyi dskeiricvg
      121 twnvggkvpp ddldiddwid thepadiyvl glqeivplna gnifgaedsr pvpkweniir
      181 ealnrirpaa tkvkcysdpp spskfepsdd vrnldeeisl esdsdigeei ypldeeplgf
      241 defnnaaesk tlftnsgvse cndgskldvp veqdlqrqfs spkkldrlnc lrmegyaenv
      301 eapvsqqnak ftrmlsgiqq ngkltrilsg teriglswpe pplnllsqhv ldrpasfksv
      361 ksfratksfr tyssfrsind masgiallae ldleslmkrk rrssyvrivs kqmvgiflti
      421 wvrrslrkhi qnlkvstvgv gvmgyignkg sisvsmsiyq tlfcficthl tsgekdgdel
      481 krnsdvheil rrthfhsrsa iglpksihdh ekiiwfgdln yrlnlsydka rdfiskrews
      541 klierdqlvr elqkgrtfdg wsegalnfap tykyelnskk yygedpkigr ripawcdril
      601 srgkgmrqls yrrteqklsd hrpvtaiyma evevfcpkkl qraliytnae ieneeveaed
      661 fdy
//
LOCUS       XP_016693806             648 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693806
VERSION     XP_016693806.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693806.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..648
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X2"
                     /calculated_mol_wt=74414
     Region          2..629
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(454,505,606)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..648
                     /gene="LOC107910472"
                     /coded_by="XM_016838317.2:381..2327"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse hfwpsafmrk llnitprgsd ysadteeedd vgsdseteef fecshgrvsr
       61 fkesreeepp sdlndnitri rrrrrksetf raqyidskei ricvgtwnvg gkvppddldi
      121 ddwidthepa diyvlglqei vplnagnifg aedsrpvpkw eniirealnr irpaatkvkc
      181 ysdppspskf epsddvrnld eeislesdsd igeeiyplde eplgfdefnn aaesktlftn
      241 sgvsecndgs kldvpveqdl qrqfsspkkl drlnclrmeg yaenveapvs qqnakftrml
      301 sgiqqngklt rilsgterig lswpepplnl lsqhvldrpa sfksvksfra tksfrtyssf
      361 rsindmasgi allaeldles lmkrkrrssy vrivskqmvg ifltiwvrrs lrkhiqnlkv
      421 stvgvgvmgy ignkgsisvs msiyqtlfcf icthltsgek dgdelkrnsd vheilrrthf
      481 hsrsaiglpk sihdhekiiw fgdlnyrlnl sydkardfis krewsklier dqlvrelqkg
      541 rtfdgwsega lnfaptykye lnskkyyged pkigrripaw cdrilsrgkg mrqlsyrrte
      601 qklsdhrpvt aiymaevevf cpkklqrali ytnaeienee veaedfdy
//
LOCUS       XP_016693807             648 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693807
VERSION     XP_016693807.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838318.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693807.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..648
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X2"
                     /calculated_mol_wt=74414
     Region          2..629
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(454,505,606)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..648
                     /gene="LOC107910472"
                     /coded_by="XM_016838318.2:305..2251"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse hfwpsafmrk llnitprgsd ysadteeedd vgsdseteef fecshgrvsr
       61 fkesreeepp sdlndnitri rrrrrksetf raqyidskei ricvgtwnvg gkvppddldi
      121 ddwidthepa diyvlglqei vplnagnifg aedsrpvpkw eniirealnr irpaatkvkc
      181 ysdppspskf epsddvrnld eeislesdsd igeeiyplde eplgfdefnn aaesktlftn
      241 sgvsecndgs kldvpveqdl qrqfsspkkl drlnclrmeg yaenveapvs qqnakftrml
      301 sgiqqngklt rilsgterig lswpepplnl lsqhvldrpa sfksvksfra tksfrtyssf
      361 rsindmasgi allaeldles lmkrkrrssy vrivskqmvg ifltiwvrrs lrkhiqnlkv
      421 stvgvgvmgy ignkgsisvs msiyqtlfcf icthltsgek dgdelkrnsd vheilrrthf
      481 hsrsaiglpk sihdhekiiw fgdlnyrlnl sydkardfis krewsklier dqlvrelqkg
      541 rtfdgwsega lnfaptykye lnskkyyged pkigrripaw cdrilsrgkg mrqlsyrrte
      601 qklsdhrpvt aiymaevevf cpkklqrali ytnaeienee veaedfdy
//
LOCUS       XP_040944342             648 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944342
VERSION     XP_040944342.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088408.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..648
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X2"
                     /calculated_mol_wt=74414
     Region          2..629
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(454,505,606)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..648
                     /gene="LOC107910472"
                     /coded_by="XM_041088408.1:381..2327"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse hfwpsafmrk llnitprgsd ysadteeedd vgsdseteef fecshgrvsr
       61 fkesreeepp sdlndnitri rrrrrksetf raqyidskei ricvgtwnvg gkvppddldi
      121 ddwidthepa diyvlglqei vplnagnifg aedsrpvpkw eniirealnr irpaatkvkc
      181 ysdppspskf epsddvrnld eeislesdsd igeeiyplde eplgfdefnn aaesktlftn
      241 sgvsecndgs kldvpveqdl qrqfsspkkl drlnclrmeg yaenveapvs qqnakftrml
      301 sgiqqngklt rilsgterig lswpepplnl lsqhvldrpa sfksvksfra tksfrtyssf
      361 rsindmasgi allaeldles lmkrkrrssy vrivskqmvg ifltiwvrrs lrkhiqnlkv
      421 stvgvgvmgy ignkgsisvs msiyqtlfcf icthltsgek dgdelkrnsd vheilrrthf
      481 hsrsaiglpk sihdhekiiw fgdlnyrlnl sydkardfis krewsklier dqlvrelqkg
      541 rtfdgwsega lnfaptykye lnskkyyged pkigrripaw cdrilsrgkg mrqlsyrrte
      601 qklsdhrpvt aiymaevevf cpkklqrali ytnaeienee veaedfdy
//
LOCUS       XP_040944343             520 aa            linear   PLN 06-AUG-2024
DEFINITION  type IV inositol polyphosphate 5-phosphatase 3 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040944343
VERSION     XP_040944343.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088409.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..520
                     /product="type IV inositol polyphosphate 5-phosphatase 3
                     isoform X3"
                     /calculated_mol_wt=59063
     Region          27..>516
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     CDS             1..520
                     /gene="LOC107910472"
                     /coded_by="XM_041088409.1:381..1943"
                     /db_xref="GeneID:107910472"
ORIGIN      
        1 mrqgskhhse rswaeiccfc cfciqhfwps afmrkllnit prgsdysadt eeeddvgsds
       61 eteeffecsh grvsrfkesr eeeppsdlnd nitrirrrrr ksetfraqyi dskeiricvg
      121 twnvggkvpp ddldiddwid thepadiyvl glqeivplna gnifgaedsr pvpkweniir
      181 ealnrirpaa tkvkcysdpp spskfepsdd vrnldeeisl esdsdigeei ypldeeplgf
      241 defnnaaesk tlftnsgvse cndgskldvp veqdlqrqfs spkkldrlnc lrmegyaenv
      301 eapvsqqnak ftrmlsgiqq ngkltrilsg teriglswpe pplnllsqhv ldrpasfksv
      361 ksfratksfr tyssfrsind masgiallae ldleslmkrk rrssyvrivs kqmvgiflti
      421 wvrrslrkhi qnlkvstvgv gvmgyignkg sisvsmsiyq tlfcficthl tsgekdgdel
      481 krnsdvheil rrthfhsrsa iglpksihdh edafsfqaek
//
LOCUS       XP_040944344            1155 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GIGANTEA isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944344
VERSION     XP_040944344.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088410.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1155
                     /product="protein GIGANTEA isoform X1"
                     /calculated_mol_wt=127006
     CDS             1..1155
                     /gene="LOC107910471"
                     /coded_by="XM_041088410.1:414..3881"
                     /db_xref="GeneID:107910471"
ORIGIN      
        1 manpserwid glqfsslfrp ppqdpqhrkv qitayveyfg qftseqfped iaelvrnryp
       61 sdeqrlfddv latfvlhhpe hghavvlpii aciidgtlmy dknappfssf islvcpssen
      121 eyseqwalac geilrilthy nrpicktelp nseadrsnss sqattsesad gessfhmpsm
      181 rqerkplrpl spwitdilla aplgirsdyf rwcsgvmgky aagdlrppmt asirgsgkhp
      241 qlmpstprwa vangagvils vcdeevarye tatltaaavp alllppptta ldehlvaglp
      301 alepyarlfh ryyaiatpsa tqrlllglle appswapdal daavqlvell raaedyatgi
      361 rlprnwmhlh flraigtams mrvgiaadaa aallfrilsq pallfpplrq vegvavqhep
      421 sdgyiscyrk qievpaaeat ieataqgias mlcahgpeve wrictiweaa ygliplsssa
      481 vdlpdiivat plqppilswn lyipllkvle ylprgspsea clmkifvatv eailqrtfpp
      541 eysreqtrki rysmgsalkn lavaelrtmv hslflescas velasrllfv vltvcvshea
      601 qfhgikrprs aesyppdesi eesqaqfekl rdikprktkn qgpvsafdsy vlaavcalac
      661 elqlfplvts gnthliaknv qakpnhtkvn gssieyghgi dsaihhtrri lailealfsl
      721 kpssvgtswt yssneivaaa mvaahvself rqskacmhal svlmrckwdn eiytrassly
      781 nlidihskav asivdkaepl eaqliyapvc ldsrtrskrt ntaccdpprv ssseyedsih
      841 sannlrcqmv ltsdeglgns tgksvesfpl dasdlanflt kdrhlgfncs aqillrsvlv
      901 ekqelcfsvv sllwhkliaa petqpsaest saqqgwrqvv dalcnvvsas pakaatavvl
      961 qadrelqpwi aknddqgqkm wrinqrivkl ivelmrnhdi peslvivasa sdlllratdg
     1021 mlvdgeactl pqlelleata ravqpvlewg esglavvdgl snllkcrlpa ttrclshpsa
     1081 hvralsisvl rnilqsnpkl eingnhgpyf sisvidwhtd iekcltweah sqlargmpih
     1141 flntaakelg cnism
//
LOCUS       XP_016693799            1155 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GIGANTEA isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693799
VERSION     XP_016693799.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693799.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1155
                     /product="protein GIGANTEA isoform X1"
                     /calculated_mol_wt=127006
     CDS             1..1155
                     /gene="LOC107910471"
                     /coded_by="XM_016838310.2:405..3872"
                     /db_xref="GeneID:107910471"
ORIGIN      
        1 manpserwid glqfsslfrp ppqdpqhrkv qitayveyfg qftseqfped iaelvrnryp
       61 sdeqrlfddv latfvlhhpe hghavvlpii aciidgtlmy dknappfssf islvcpssen
      121 eyseqwalac geilrilthy nrpicktelp nseadrsnss sqattsesad gessfhmpsm
      181 rqerkplrpl spwitdilla aplgirsdyf rwcsgvmgky aagdlrppmt asirgsgkhp
      241 qlmpstprwa vangagvils vcdeevarye tatltaaavp alllppptta ldehlvaglp
      301 alepyarlfh ryyaiatpsa tqrlllglle appswapdal daavqlvell raaedyatgi
      361 rlprnwmhlh flraigtams mrvgiaadaa aallfrilsq pallfpplrq vegvavqhep
      421 sdgyiscyrk qievpaaeat ieataqgias mlcahgpeve wrictiweaa ygliplsssa
      481 vdlpdiivat plqppilswn lyipllkvle ylprgspsea clmkifvatv eailqrtfpp
      541 eysreqtrki rysmgsalkn lavaelrtmv hslflescas velasrllfv vltvcvshea
      601 qfhgikrprs aesyppdesi eesqaqfekl rdikprktkn qgpvsafdsy vlaavcalac
      661 elqlfplvts gnthliaknv qakpnhtkvn gssieyghgi dsaihhtrri lailealfsl
      721 kpssvgtswt yssneivaaa mvaahvself rqskacmhal svlmrckwdn eiytrassly
      781 nlidihskav asivdkaepl eaqliyapvc ldsrtrskrt ntaccdpprv ssseyedsih
      841 sannlrcqmv ltsdeglgns tgksvesfpl dasdlanflt kdrhlgfncs aqillrsvlv
      901 ekqelcfsvv sllwhkliaa petqpsaest saqqgwrqvv dalcnvvsas pakaatavvl
      961 qadrelqpwi aknddqgqkm wrinqrivkl ivelmrnhdi peslvivasa sdlllratdg
     1021 mlvdgeactl pqlelleata ravqpvlewg esglavvdgl snllkcrlpa ttrclshpsa
     1081 hvralsisvl rnilqsnpkl eingnhgpyf sisvidwhtd iekcltweah sqlargmpih
     1141 flntaakelg cnism
//
LOCUS       XP_016693802             939 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GIGANTEA isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693802
VERSION     XP_016693802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..939
                     /product="protein GIGANTEA isoform X2"
                     /calculated_mol_wt=102464
     CDS             1..939
                     /gene="LOC107910471"
                     /coded_by="XM_016838313.2:225..3044"
                     /db_xref="GeneID:107910471"
ORIGIN      
        1 mgkyaagdlr ppmtasirgs gkhpqlmpst prwavangag vilsvcdeev aryetatlta
       61 aavpalllpp pttaldehlv aglpalepya rlfhryyaia tpsatqrlll glleappswa
      121 pdaldaavql vellraaedy atgirlprnw mhlhflraig tamsmrvgia adaaaallfr
      181 ilsqpallfp plrqvegvav qhepsdgyis cyrkqievpa aeatieataq giasmlcahg
      241 pevewricti weaayglipl sssavdlpdi ivatplqppi lswnlyipll kvleylprgs
      301 pseaclmkif vatveailqr tfppeysreq trkirysmgs alknlavael rtmvhslfle
      361 scasvelasr llfvvltvcv sheaqfhgik rprsaesypp desieesqaq feklrdikpr
      421 ktknqgpvsa fdsyvlaavc alacelqlfp lvtsgnthli aknvqakpnh tkvngssiey
      481 ghgidsaihh trrilailea lfslkpssvg tswtyssnei vaaamvaahv selfrqskac
      541 mhalsvlmrc kwdneiytra sslynlidih skavasivdk aepleaqliy apvcldsrtr
      601 skrtntaccd pprvssseye dsihsannlr cqmvltsdeg lgnstgksve sfpldasdla
      661 nfltkdrhlg fncsaqillr svlvekqelc fsvvsllwhk liaapetqps aestsaqqgw
      721 rqvvdalcnv vsaspakaat avvlqadrel qpwiaknddq gqkmwrinqr ivklivelmr
      781 nhdipeslvi vasasdlllr atdgmlvdge actlpqlell eataravqpv lewgesglav
      841 vdglsnllkc rlpattrcls hpsahvrals isvlrnilqs npkleingnh gpyfsisvid
      901 whtdiekclt weahsqlarg mpihflntaa kelgcnism
//
LOCUS       XP_016693798             152 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S18 [Gossypium hirsutum].
ACCESSION   XP_016693798
VERSION     XP_016693798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="40S ribosomal protein S18"
                     /calculated_mol_wt=17505
     Region          1..152
                     /region_name="PTZ00134"
                     /note="40S ribosomal protein S18; Provisional"
                     /db_xref="CDD:185469"
     CDS             1..152
                     /gene="LOC107910470"
                     /coded_by="XM_016838309.2:151..609"
                     /db_xref="GeneID:107910470"
ORIGIN      
        1 mslvanedfq hilrvlntnv dgkqkimfal tsikgigrrf anivckkadv dmnkragelt
       61 aqeldnlmti vanprqfkip dwflnrqkdy kdgkysqvvs naldmklrdd lerlkkirnh
      121 rglrhywglr vrgqhtkttg rrgktvgvsk kr
//
LOCUS       XP_016693797             214 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693797
VERSION     XP_016693797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..214
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23690
     CDS             1..214
                     /gene="LOC107910469"
                     /coded_by="XM_016838308.2:312..956"
                     /db_xref="GeneID:107910469"
ORIGIN      
        1 mgkkrksiat sldevdrtmy asfcsaansl sqlytqamnq qklsfqagkg hsleklyqwi
       61 wrqqeggsrv ttmdilnylk neidycgeep smsprapsqq hqsqptmqfm ntsfmvssgs
      121 sgqtavqgtr pdysdqqpkn sifsnalssp vlqslqyyhi aqegycpngl psgngdrnne
      181 snflqpptrd snplssndss mdmhadspsh esty
//
LOCUS       XP_016693796             209 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693796
VERSION     XP_016693796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838307.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22537
     CDS             1..209
                     /gene="LOC107910468"
                     /coded_by="XM_016838307.2:375..1004"
                     /db_xref="GeneID:107910468"
ORIGIN      
        1 mlltvegggf fsssasgysk gfallllgqk hedksmrvsp wnhyqlvdqe pdpdpdlqla
       61 siknrlsrgc asfvcfgrts agldtpsplk vgpvqqqdvl pgsfasdksn dqatqlddgn
      121 sdarkvvfks slkkqshttq vpledgndre vsgekdgdip shtvrrkvqw tdahgselae
      181 irefepsetg gsddefsngs ektcactim
//
LOCUS       XP_016695614             371 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 12 [Gossypium hirsutum].
ACCESSION   XP_016695614
VERSION     XP_016695614.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016695614.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..371
                     /product="peroxidase 12"
                     /calculated_mol_wt=40485
     Region          52..346
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(82,85..86,88..89,92..93,123,125,192..195,201,205,
                     215,218..219,221..222,224..228,230..231,267,290,292,324)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(82,85..86,88..89,92,121,123,125,192..194,201,205,
                     215,218..219,221..222,224..228,231,267,290,292,324)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(89,119..120,192..195,228,230..231)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(94,97,101,103,223,268,271,274,276)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..371
                     /gene="LOC107912053"
                     /coded_by="XM_016840125.2:16..1131"
                     /db_xref="GeneID:107912053"
ORIGIN      
        1 mqrqgrkrnt knlsmakvtn ffvallliss lllapylsis eaadnsvpiv sglswtfykt
       61 sctklesiir tqlkkvfdnd igqaagllrl hfhdcfvqgc dgsvlldgsa sgpgeqqapp
      121 nlslrakafe iindlrnrve kacgrvvscs divalaards vylsggpdyg iplgrrdglt
      181 fatvnatlqn lpppfanatt ilsmlatknf dptdvvalsg ghtvgishct sfttrlyptq
      241 dptmdktfan nlkvicptvn stnttvmdir spnkfdnkyy vdlmnrqglf tsdqdlytds
      301 rtrgivtsfa inetlffekf vvsmikmgql svltgnngei rancsvrnad nksyfasvve
      361 elpveeawsd l
//
LOCUS       XP_040944345             171 aa            linear   PLN 06-AUG-2024
DEFINITION  light-harvesting complex-like protein OHP2, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_040944345
VERSION     XP_040944345.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088411.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="light-harvesting complex-like protein OHP2,
                     chloroplastic"
                     /calculated_mol_wt=18286
     Region          <129..>157
                     /region_name="PLN00014"
                     /note="light-harvesting-like protein 3; Provisional"
                     /db_xref="CDD:177653"
     CDS             1..171
                     /gene="LOC107910467"
                     /coded_by="XM_041088411.1:171..686"
                     /db_xref="GeneID:107910467"
ORIGIN      
        1 msmassipyi kipntsssss aaasstccrl cttakpyivt irssqsegpl rrptapspps
       61 pvklfppspp ppttpppqss sspapvgdqn vislefqrqk akelqdyfkq kkleesnqgp
      121 flgfigknei gngrwamfgf avgmlteyat gsnfvdqvki mlsnfgiidl d
//
LOCUS       XP_016695792             425 aa            linear   PLN 06-AUG-2024
DEFINITION  protein S-acyltransferase 8 [Gossypium hirsutum].
ACCESSION   XP_016695792
VERSION     XP_016695792.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840303.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..425
                     /product="protein S-acyltransferase 8"
                     /calculated_mol_wt=48178
     Region          138..259
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..425
                     /gene="LOC107912132"
                     /coded_by="XM_016840303.2:349..1626"
                     /db_xref="GeneID:107912132"
ORIGIN      
        1 mekrvyevwk gsnkfilggr lifgpdaksl lvtlllitvp viifcvfvar hlrhafspyn
       61 agyailavai vftiyvlill fltsardpgi iprnshppee efrydssvsa evggrqtpsl
      121 qfprtkevmv ngvhvrvkyc dtcmlyrppr cshcsicnnc verfdhhcpw vgqciglrny
      181 ryffmfvssa tllciyvfsm salyikvlmd dhqgtvwkam kesppsvilm tycfialwfv
      241 ggltgfhlyl istnqttyen frfradnrin vynlgcpsnf levfctkikp sknnfrafvr
      301 eevprptlqs iqgaeaedlg ggdprpkved dleigedllk isqrrnieei dedirsrgsn
      361 gpahtalevd aildsdhrap tirsetrhss wgrrsgswei atddvlsnsk vtesrsymtg
      421 kegrq
//
LOCUS       XP_016695721             425 aa            linear   PLN 06-AUG-2024
DEFINITION  protein S-acyltransferase 8 [Gossypium hirsutum].
ACCESSION   XP_016695721
VERSION     XP_016695721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016840232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..425
                     /product="protein S-acyltransferase 8"
                     /calculated_mol_wt=48178
     Region          138..259
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..425
                     /gene="LOC107912132"
                     /coded_by="XM_016840232.2:349..1626"
                     /db_xref="GeneID:107912132"
ORIGIN      
        1 mekrvyevwk gsnkfilggr lifgpdaksl lvtlllitvp viifcvfvar hlrhafspyn
       61 agyailavai vftiyvlill fltsardpgi iprnshppee efrydssvsa evggrqtpsl
      121 qfprtkevmv ngvhvrvkyc dtcmlyrppr cshcsicnnc verfdhhcpw vgqciglrny
      181 ryffmfvssa tllciyvfsm salyikvlmd dhqgtvwkam kesppsvilm tycfialwfv
      241 ggltgfhlyl istnqttyen frfradnrin vynlgcpsnf levfctkikp sknnfrafvr
      301 eevprptlqs iqgaeaedlg ggdprpkved dleigedllk isqrrnieei dedirsrgsn
      361 gpahtalevd aildsdhrap tirsetrhss wgrrsgswei atddvlsnsk vtesrsymtg
      421 kegrq
//
LOCUS       XP_016693790             330 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF110 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693790
VERSION     XP_016693790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838301.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..330
                     /product="ethylene-responsive transcription factor ERF110
                     isoform X1"
                     /calculated_mol_wt=36098
     Region          131..182
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     CDS             1..330
                     /gene="LOC107910464"
                     /coded_by="XM_016838301.2:280..1272"
                     /db_xref="GeneID:107910464"
ORIGIN      
        1 mffgsqshhq atemsamvsa lthvvsgqrf aawdcypfnm datcfqqtqt gsasglapck
       61 igqkrgraed vtahlvqtss hahssspats vteeietaat tsmetageaa aasneetgep
      121 rrryrgvrqr pwgkwaaeir dpnkaarvwl gtfdtaeaaa raydeaalrf rgnraklnfp
      181 envrvvvpqp mqnfpttqtp vsssqtthfp syyqspptad mlrdywqysq llqscndfhe
      241 qqatsllnqm iqssqlpnvq ppllssslsp pllsspsssa sasfpllfge qhqmgisrpp
      301 fnqtqvsqsd fpvpppppws hrghhssstc
//
LOCUS       XP_016693791             300 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF110 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693791
VERSION     XP_016693791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838302.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..300
                     /product="ethylene-responsive transcription factor ERF110
                     isoform X2"
                     /calculated_mol_wt=32722
     Region          101..152
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     CDS             1..300
                     /gene="LOC107910464"
                     /coded_by="XM_016838302.2:274..1176"
                     /db_xref="GeneID:107910464"
ORIGIN      
        1 mffgsqshhq atemsamtqt gsasglapck igqkrgraed vtahlvqtss hahssspats
       61 vteeietaat tsmetageaa aasneetgep rrryrgvrqr pwgkwaaeir dpnkaarvwl
      121 gtfdtaeaaa raydeaalrf rgnraklnfp envrvvvpqp mqnfpttqtp vsssqtthfp
      181 syyqspptad mlrdywqysq llqscndfhe qqatsllnqm iqssqlpnvq ppllssslsp
      241 pllsspsssa sasfpllfge qhqmgisrpp fnqtqvsqsd fpvpppppws hrghhssstc
//
LOCUS       XP_040944346             438 aa            linear   PLN 06-AUG-2024
DEFINITION  polypyrimidine tract-binding protein homolog 3 [Gossypium
            hirsutum].
ACCESSION   XP_040944346
VERSION     XP_040944346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088412.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..438
                     /product="polypyrimidine tract-binding protein homolog 3"
                     /calculated_mol_wt=48858
     Region          4..428
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..438
                     /gene="LOC121214606"
                     /coded_by="XM_041088412.1:256..1572"
                     /db_xref="GeneID:121214606"
ORIGIN      
        1 maeaskvihv rnvgheisen dllqlfqpfg vitklvmlra knqallqmqd ipsainamqf
       61 ytnvqptirg rnvyvqfssh qelttmdqna qgrgdepnri llvtihhmly pitvevlhqv
      121 fsphgfveki vtfqksagfq aliqyqgrqn aisartslqg rniydgccql diqfsnldel
      181 qvhynnersr dftnpnlpte qkgrssqhpg ygdagvgfpq manaaaiaaa fggglppgis
      241 gtndrctvlv snlnpdride dklfnlfsly gnivrikllh nkpdhalvqm gdgfqaelav
      301 hflkgamlfg krlevnfskh pnitqgtdth eyvnsnlnrf nrnaaknyry ccsptkmvhl
      361 stlpqdvtee eivnhlaqhg tivntklfem ngkkqalvmf eteeqateal vskhatslgg
      421 siirisfsql qtirensq
//
LOCUS       XP_016693788             389 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L3 [Gossypium hirsutum].
ACCESSION   XP_016693788
VERSION     XP_016693788.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838299.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693788.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..389
                     /product="60S ribosomal protein L3"
                     /calculated_mol_wt=44277
     Region          1..388
                     /region_name="PTZ00103"
                     /note="60S ribosomal protein L3; Provisional"
                     /db_xref="CDD:240267"
     CDS             1..389
                     /gene="LOC107910462"
                     /coded_by="XM_016838299.2:136..1305"
                     /db_xref="GeneID:107910462"
ORIGIN      
        1 mshrkfehpr hgslgflprk rasrhrgkvk afpkddpskp ckltaflgyk agmthivrev
       61 ekpgsklhkk etceavtiie tppmvivgvv gyvktprglr slntvwaqhl seevkrrfyk
      121 hwckskkkaf tkyskqyese egkksidaql ekmkkyatvi rvlahtqirk mkglkqkkah
      181 lmeiqvnggt iadkvdfayk ffekqvpida vfqkdemidi igvtkgkgye gvvtrwgvtr
      241 lprkthrglr kvacigawhp arvsftvara gqngyhhrte mnkkvyrvgk vgdethsait
      301 dydrtekdit piggfphygv vksdylmikg gcvgpkkrvv tlrqslinlt srvaleeikl
      361 kfidtsskfg hgrfqttqek qkfygrlka
//
LOCUS       XP_016693785             301 aa            linear   PLN 06-AUG-2024
DEFINITION  G-box-binding factor 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693785
VERSION     XP_016693785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838296.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..301
                     /product="G-box-binding factor 4 isoform X1"
                     /calculated_mol_wt=33129
     Region          221..267
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          222..267
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(225..226,228..230,232..237,239..241)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     CDS             1..301
                     /gene="LOC107910461"
                     /coded_by="XM_016838296.2:270..1175"
                     /db_xref="GeneID:107910461"
ORIGIN      
        1 masstsnsrn sdlsrrstts sstkpllltd qktnddnenr lsstmtvdgi lrnvysvaps
       61 tettlvdasi tlidapipns vsenpevpqv qtaadcnnnv aksvdevwre ivsgerkeit
      121 mkeevpdemm tledflakag aveeaaavas aevklhpdrl sggvytfdpv gggafqildk
      181 megsivglgn gmevigsggg ggrgkrgrgv lmepldkaaq qrqrrmiknr esaarsrerk
      241 qayqvelesl avkleeenew llkekaertk erfkqlmekv vpvveqrrpp rmlrrvrslq
      301 w
//
LOCUS       XP_016693787             291 aa            linear   PLN 06-AUG-2024
DEFINITION  G-box-binding factor 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693787
VERSION     XP_016693787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..291
                     /product="G-box-binding factor 4 isoform X2"
                     /calculated_mol_wt=31854
     Region          221..272
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          222..272
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(225..226,228..230,232..237,239..241)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(240,243..244,247..248,250..251,254..255,257..258,
                     261..262,264..265,268..269,271..272)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..291
                     /gene="LOC107910461"
                     /coded_by="XM_016838298.2:271..1146"
                     /db_xref="GeneID:107910461"
ORIGIN      
        1 masstsnsrn sdlsrrstts sstkpllltd qktnddnenr lsstmtvdgi lrnvysvaps
       61 tettlvdasi tlidapipns vsenpevpqv qtaadcnnnv aksvdevwre ivsgerkeit
      121 mkeevpdemm tledflakag aveeaaavas aevklhpdrl sggvytfdpv gggafqildk
      181 megsivglgn gmevigsggg ggrgkrgrgv lmepldkaaq qrqrrmiknr esaarsrerk
      241 qayqvelesl avkleeenew llkeklmekv vpvveqrrpp rmlrrvrslq w
//
LOCUS       XP_016693782             242 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693782
VERSION     XP_016693782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..242
                     /product="early nodulin-like protein 2 isoform X1"
                     /calculated_mol_wt=25869
     Region          22..113
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     CDS             1..242
                     /gene="LOC107910460"
                     /coded_by="XM_016838293.2:160..888"
                     /db_xref="GeneID:107910460"
ORIGIN      
        1 meriffsili flfqfflpsl satimvggvs hwenptvhvg dsvifkhkyq yelyifqnkn
       61 asilcnftqa slltnpnsss yewhpsrtgf fyfafnngtl ktcrgsqkls ikvtpaener
      121 tpspelppaa apaptsggtv vssssptypw pfrprqavsp spsasspvav ptlvpdkgge
      181 gipfinsnpa vplptgevds atirplptsd hggkligvva lqavvgilta pmalfsmafl
      241 al
//
LOCUS       XP_016693783             234 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693783
VERSION     XP_016693783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="early nodulin-like protein 2 isoform X2"
                     /calculated_mol_wt=25075
     Region          22..113
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     CDS             1..234
                     /gene="LOC107910460"
                     /coded_by="XM_016838294.2:246..950"
                     /db_xref="GeneID:107910460"
ORIGIN      
        1 meriffsili flfqfflpsl satimvggvs hwenptvhvg dsvifkhkyq yelyifqnkn
       61 asilcnftqa slltnpnsss yewhpsrtgf fyfafnngtl ktcrgsqkls ikvtpaener
      121 tpspelppaa apaptsggtv vssssptypw pfrprqavsp spsasspvav ptlvpdkgge
      181 gipfinsnpa vplptgevds atirplptsd hggkavvgil tapmalfsma flal
//
LOCUS       XP_040944347             223 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944347
VERSION     XP_040944347.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088413.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="early nodulin-like protein 2 isoform X3"
                     /calculated_mol_wt=24210
     Region          22..113
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     CDS             1..223
                     /gene="LOC107910460"
                     /coded_by="XM_041088413.1:158..829"
                     /db_xref="GeneID:107910460"
ORIGIN      
        1 meriffsili flfqfflpsl satimvggvs hwenptvhvg dsvifkhkyq yelyifqnkn
       61 asilcnftqa slltnpnsss yewhpsrtgf fyfafnngtl ktcrgsqkls ikvtpaener
      121 tpspelppaa apaptsggtv vssssptypw pfrprqavsp spsasspvav ptlvpdkgge
      181 gipfinsnpa vplptgevds atirplptsd hggklhcrqw wgs
//
LOCUS       XP_016693784             215 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016693784
VERSION     XP_016693784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..215
                     /product="early nodulin-like protein 2 isoform X4"
                     /calculated_mol_wt=23185
     Region          22..113
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     CDS             1..215
                     /gene="LOC107910460"
                     /coded_by="XM_016838295.2:157..804"
                     /db_xref="GeneID:107910460"
ORIGIN      
        1 meriffsili flfqfflpsl satimvggvs hwenptvhvg dsvifkhkyq yelyifqnkn
       61 asilcnftqa slltnpnsss yewhpsrtgf fyfafnngtl ktcrgsqkls ikvtpaener
      121 tpspelppaa apaptsggtv vssssptypw pfrprqavsp spsasspvav ptlvpdkgge
      181 gipfinsnpa vplptgevds atirplptsd hggke
//
LOCUS       XP_016693781             401 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ROH1 [Gossypium hirsutum].
ACCESSION   XP_016693781
VERSION     XP_016693781.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693781.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..401
                     /product="protein ROH1"
                     /calculated_mol_wt=45425
     Region          1..393
                     /region_name="DUF677"
                     /note="Protein of unknown function (DUF677); cl21731"
                     /db_xref="CDD:451372"
     CDS             1..401
                     /gene="LOC107910459"
                     /coded_by="XM_016838292.2:205..1410"
                     /db_xref="GeneID:107910459"
ORIGIN      
        1 mpatdyqgts spltnigrsl lpvrrdqvha mespiggsas neaeiesfqr rvadrfhdla
       61 sapsdellsl pwvrklldvf lccqeefrvi lfnnialvkk spmdrliadf yertvkaldv
      121 cnairdgieq irqwqkllei vlcalgdsnv gyqrslgegq frrarkalid laigmldekd
      181 sgqalahrnr sfgrhntsgs hskdhhhrsl ghfrslswsv srswsaarql qaignnlaap
      241 rgnevlatng lavpvytmgs vllfvmwalv aaipcqdrgl qvhfnvprqf pwsapilwly
      301 erileeskkr drknacgllr eiyqmekcsr llgeladsvq fplsedkere vkqrvkeleq
      361 vldalkedle plekqvrevf hrivrsrteg ldsfarghnp e
//
LOCUS       XP_040944348             449 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944348
VERSION     XP_040944348.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088414.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51478
     Region          119..209
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..449
                     /gene="LOC107910457"
                     /coded_by="XM_041088414.1:668..2017"
                     /db_xref="GeneID:107910457"
ORIGIN      
        1 megnlsqggm ipgggsfggl dlqgsmrvhn haqnphsihq hhhpnprqga slhasihedf
       61 plkmgniqns dqiislmdyn kgergkssvs dedepsftee gidghndgsk gkkgspwqrv
      121 kwtdkmvrll itavsyiged aaggcgggmr rkfaviqkkg kwksvskvma ersyhvspqq
      181 cedkfndlnk rykklndmlg rgtscqvven palldvidyl tekekddvrk ilsskhlfye
      241 emcsyhngnr lhlphdpqlq rslqlafrik ddqekddakr hrhddndddd dddddmetdd
      301 hddfeenhas hgddrgiyrv lggsakrsrq vqvhedacfh nssnsqdcnk nsfpypppaq
      361 adinqappen praawlqkqw iescslqlee qklqiqveml elekqrfkwq rfskkrdrel
      421 ekmrmenerm klenermale lkrkeldad
//
LOCUS       XP_040944349             449 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944349
VERSION     XP_040944349.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088415.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51478
     Region          119..209
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..449
                     /gene="LOC107910457"
                     /coded_by="XM_041088415.1:668..2017"
                     /db_xref="GeneID:107910457"
ORIGIN      
        1 megnlsqggm ipgggsfggl dlqgsmrvhn haqnphsihq hhhpnprqga slhasihedf
       61 plkmgniqns dqiislmdyn kgergkssvs dedepsftee gidghndgsk gkkgspwqrv
      121 kwtdkmvrll itavsyiged aaggcgggmr rkfaviqkkg kwksvskvma ersyhvspqq
      181 cedkfndlnk rykklndmlg rgtscqvven palldvidyl tekekddvrk ilsskhlfye
      241 emcsyhngnr lhlphdpqlq rslqlafrik ddqekddakr hrhddndddd dddddmetdd
      301 hddfeenhas hgddrgiyrv lggsakrsrq vqvhedacfh nssnsqdcnk nsfpypppaq
      361 adinqappen praawlqkqw iescslqlee qklqiqveml elekqrfkwq rfskkrdrel
      421 ekmrmenerm klenermale lkrkeldad
//
LOCUS       XP_040944350             449 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944350
VERSION     XP_040944350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088416.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51478
     Region          119..209
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..449
                     /gene="LOC107910457"
                     /coded_by="XM_041088416.1:668..2017"
                     /db_xref="GeneID:107910457"
ORIGIN      
        1 megnlsqggm ipgggsfggl dlqgsmrvhn haqnphsihq hhhpnprqga slhasihedf
       61 plkmgniqns dqiislmdyn kgergkssvs dedepsftee gidghndgsk gkkgspwqrv
      121 kwtdkmvrll itavsyiged aaggcgggmr rkfaviqkkg kwksvskvma ersyhvspqq
      181 cedkfndlnk rykklndmlg rgtscqvven palldvidyl tekekddvrk ilsskhlfye
      241 emcsyhngnr lhlphdpqlq rslqlafrik ddqekddakr hrhddndddd dddddmetdd
      301 hddfeenhas hgddrgiyrv lggsakrsrq vqvhedacfh nssnsqdcnk nsfpypppaq
      361 adinqappen praawlqkqw iescslqlee qklqiqveml elekqrfkwq rfskkrdrel
      421 ekmrmenerm klenermale lkrkeldad
//
LOCUS       XP_040944351             449 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944351
VERSION     XP_040944351.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088417.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51478
     Region          119..209
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..449
                     /gene="LOC107910457"
                     /coded_by="XM_041088417.1:668..2017"
                     /db_xref="GeneID:107910457"
ORIGIN      
        1 megnlsqggm ipgggsfggl dlqgsmrvhn haqnphsihq hhhpnprqga slhasihedf
       61 plkmgniqns dqiislmdyn kgergkssvs dedepsftee gidghndgsk gkkgspwqrv
      121 kwtdkmvrll itavsyiged aaggcgggmr rkfaviqkkg kwksvskvma ersyhvspqq
      181 cedkfndlnk rykklndmlg rgtscqvven palldvidyl tekekddvrk ilsskhlfye
      241 emcsyhngnr lhlphdpqlq rslqlafrik ddqekddakr hrhddndddd dddddmetdd
      301 hddfeenhas hgddrgiyrv lggsakrsrq vqvhedacfh nssnsqdcnk nsfpypppaq
      361 adinqappen praawlqkqw iescslqlee qklqiqveml elekqrfkwq rfskkrdrel
      421 ekmrmenerm klenermale lkrkeldad
//
LOCUS       XP_040944352             449 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944352
VERSION     XP_040944352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088418.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51478
     Region          119..209
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..449
                     /gene="LOC107910457"
                     /coded_by="XM_041088418.1:668..2017"
                     /db_xref="GeneID:107910457"
ORIGIN      
        1 megnlsqggm ipgggsfggl dlqgsmrvhn haqnphsihq hhhpnprqga slhasihedf
       61 plkmgniqns dqiislmdyn kgergkssvs dedepsftee gidghndgsk gkkgspwqrv
      121 kwtdkmvrll itavsyiged aaggcgggmr rkfaviqkkg kwksvskvma ersyhvspqq
      181 cedkfndlnk rykklndmlg rgtscqvven palldvidyl tekekddvrk ilsskhlfye
      241 emcsyhngnr lhlphdpqlq rslqlafrik ddqekddakr hrhddndddd dddddmetdd
      301 hddfeenhas hgddrgiyrv lggsakrsrq vqvhedacfh nssnsqdcnk nsfpypppaq
      361 adinqappen praawlqkqw iescslqlee qklqiqveml elekqrfkwq rfskkrdrel
      421 ekmrmenerm klenermale lkrkeldad
//
LOCUS       XP_016693776            1077 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component SEC5A isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693776
VERSION     XP_016693776.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838287.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693776.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1077
                     /product="exocyst complex component SEC5A isoform X1"
                     /calculated_mol_wt=120287
     Region          172..1029
                     /region_name="Sec5"
                     /note="Exocyst complex component Sec5; pfam15469"
                     /db_xref="CDD:464733"
     CDS             1..1077
                     /gene="LOC107910454"
                     /coded_by="XM_016838287.2:139..3372"
                     /db_xref="GeneID:107910454"
ORIGIN      
        1 mstdsddede llqralkdqs trdlnyqkps ssnprkpvvn fvqpppkpkg saspapknpk
       61 grkmsmdede dsevemlsis sgdedvgkdp kggaggrgrg rpmkdddgvw dgeepdtwkr
      121 vdetelarrv remresrtap vaqkferkat tapvgralnt lqsfprgmec vdplglgiid
      181 nktlrlitas sesshaekeh ldsnlreklm yfsekfdakl flsrihqdtp aadleagalg
      241 lktdlqgrtq qrkqlvkdnf dcfvscktti ddiesklkri eedpegsgtt hlfkcmqgvc
      301 sladrafepl ferqaqaeki rsvqgmlqrf rtlfnlpsti rgsiskgeyd lavreykkak
      361 sialpshvki lkrvleevek vmqefkgtly ksmedpqidl tslentvrll lelepesdpv
      421 whylnvqnhr irgllekcts dhearmetlh nelrekaisd akwlqiqqnl sqssdanysl
      481 gnielpielq plaltgeevd vlrgkyikrl ttvlvhhipa fwkvalsvfs gkfakssqvs
      541 dssggkseek vgdgrysshs ldevagmmrg tislyevkvl nafrdleess lqsymsdain
      601 eiskacvafe akesappiav malrtlqaev tkiyilrlcs wmrastegit kdetwvpvsi
      661 lernkspyti sylplafrsv mtsaidqinm miqslrseat kfedmfaqlq eiqesvkiaf
      721 lncfldfagh lehigidlaq nksskeglhl qngfshesee esssdlpgsi vdphqrlliv
      781 lsnigyckde lsselykkyk ciwlqsrgkd eeesdiqelv vsftgleekv leqytfakan
      841 lirtaamnyl ldsgvqwgsa pavkgvrdaa vellhalvav haevfagakp lldktlgilv
      901 eglidilisl fheneskdls sldangfcql mleleyfeti lnpfftsdar esmkslqgvl
      961 lekateslse venpghnrrp trgsedaaad ekqqgasvsp ddlialaqqy ssellqgele
     1021 rtrintacfv eslpmesapd svkaayasfr gpmdspsrny rgtqatgsps ftqrrrr
//
LOCUS       XP_016693777            1074 aa            linear   PLN 06-AUG-2024
DEFINITION  exocyst complex component SEC5A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693777
VERSION     XP_016693777.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838288.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693777.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1074
                     /product="exocyst complex component SEC5A isoform X2"
                     /calculated_mol_wt=119984
     Region          172..1026
                     /region_name="Sec5"
                     /note="Exocyst complex component Sec5; pfam15469"
                     /db_xref="CDD:464733"
     CDS             1..1074
                     /gene="LOC107910454"
                     /coded_by="XM_016838288.2:139..3363"
                     /db_xref="GeneID:107910454"
ORIGIN      
        1 mstdsddede llqralkdqs trdlnyqkps ssnprkpvvn fvqpppkpkg saspapknpk
       61 grkmsmdede dsevemlsis sgdedvgkdp kggaggrgrg rpmkdddgvw dgeepdtwkr
      121 vdetelarrv remresrtap vaqkferkat tapvgralnt lqsfprgmec vdplglgiid
      181 nktlrlitas sesshaekeh ldsnlreklm yfsekfdakl flsrihqdtp aadleagalg
      241 lktdlqgrtq qrkqlvkdnf dcfvscktti ddiesklkri eedpegsgtt hlfkcmqgvc
      301 sladrafepl ferqaqaeki rsvqgmlqrf rtlfnlpsti rgsiskgeyd lavreykkak
      361 sialpshvki lkrvleevek vmqefkgtly ksmedpqidl tslentvrll lelepesdpv
      421 whylnvqnhr irgllekcts dhearmetlh nelrekaisd akwlqiqqnl sqssdanysl
      481 gnielpielq plaltgeevd vlrgkyikrl ttvlvhhipa fwkvalsvfs gkfakvsdss
      541 ggkseekvgd grysshslde vagmmrgtis lyevkvlnaf rdleesslqs ymsdaineis
      601 kacvafeake sappiavmal rtlqaevtki yilrlcswmr astegitkde twvpvsiler
      661 nkspytisyl plafrsvmts aidqinmmiq slrseatkfe dmfaqlqeiq esvkiaflnc
      721 fldfaghleh igidlaqnks skeglhlqng fsheseeess sdlpgsivdp hqrllivlsn
      781 igyckdelss elykkykciw lqsrgkdeee sdiqelvvsf tgleekvleq ytfakanlir
      841 taamnyllds gvqwgsapav kgvrdaavel lhalvavhae vfagakplld ktlgilvegl
      901 idilislfhe neskdlssld angfcqlmle leyfetilnp fftsdaresm kslqgvllek
      961 ateslseven pghnrrptrg sedaaadekq qgasvspddl ialaqqysse llqgelertr
     1021 intacfvesl pmesapdsvk aayasfrgpm dspsrnyrgt qatgspsftq rrrr
//
LOCUS       XP_040944353             477 aa            linear   PLN 06-AUG-2024
DEFINITION  abscisic acid 8'-hydroxylase 3 [Gossypium hirsutum].
ACCESSION   XP_040944353
VERSION     XP_040944353.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088419.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="abscisic acid 8'-hydroxylase 3"
                     /calculated_mol_wt=54056
     Region          67..475
                     /region_name="CYP90-like"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; cd11043"
                     /db_xref="CDD:410669"
     Site            order(129,133,140,182,286..287,290..291,294..295,298,352,
                     361,363,386,418..420,424..428,431..432)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410669"
     Site            order(206..207,286,289..290,294,359..362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410669"
     CDS             1..477
                     /gene="LOC121214608"
                     /coded_by="XM_041088419.1:40..1473"
                     /db_xref="GeneID:121214608"
ORIGIN      
        1 melsilliml llfiflssaf clirigtspk amegipgsmg wpiigeslsf lsdfsspsgi
       61 fsfmnkrqqr ygkvfksfvl grytvfmtgr easkilltgk dgmvslnlfy tgqqvlgpns
      121 llqtngeahk rlrrliaepl sidglkkyfh fintqaietl dqwtgkrvlv leeassftlk
      181 vignmimsle psgeeqerfr anfkiisssf asmpfkipgt afhrgikard smyamidsii
      241 akrrngeviq qdflesliik hskgtntidn ednkltdqqm kdniltllva ghdtttaalt
      301 wlvkflgenp avleqlreeh lqiqanrkdg tnltwsevnn mpytnkvise tlrratilpw
      361 ysrkaaqdfe idgynikkgw sinldvvsih hdpetfpdpe kfdpsrfdap lktfsylgfg
      421 sgprmcpgmn lakleicifi hhlvckykwr alekddfvqp tlvrmpknky pimvell
//
LOCUS       XP_016693775             333 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor VIP1 [Gossypium hirsutum].
ACCESSION   XP_016693775
VERSION     XP_016693775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838286.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="transcription factor VIP1"
                     /calculated_mol_wt=36911
     Region          173..222
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          173..222
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(176..177,179..181,183..188,190..192)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(191,194..195,198..199,201..202,205..206,208..209,
                     212..213,215..216,219..220,222)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          196..>262
                     /region_name="ZapB"
                     /note="Cell division protein ZapB, interacts with FtsZ
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG3074"
                     /db_xref="CDD:442308"
     CDS             1..333
                     /gene="LOC107910451"
                     /coded_by="XM_016838286.2:172..1173"
                     /db_xref="GeneID:107910451"
ORIGIN      
        1 meqklrmeid qmpprgahhr rahsdttfrf ddlllfdpsd ldlscldlpd sssnpslppv
       61 tpvpaessdd sscngpprsi lnnprhirsl svdsdffdgl gltgpaisgg agdekfggkr
      121 gagekrvhhr hsnsmdgstt asfdveslma vdgvkktmap drlaelalid pkrakrilan
      181 rqsaarsker kirytnelek kvqtlqteat nlsaqvtmlq rdttgltten kelklrlqam
      241 eqqaqlrdal neklkeevqr lriqagqvsa mngnpfnrgl spqysthqpa phhfgvlqtp
      301 qqqqqqqqlq mphsstnnpt lngqpqprfm dfn
//
LOCUS       XP_040944354             477 aa            linear   PLN 06-AUG-2024
DEFINITION  abscisic acid 8'-hydroxylase 3 [Gossypium hirsutum].
ACCESSION   XP_040944354
VERSION     XP_040944354.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088420.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="abscisic acid 8'-hydroxylase 3"
                     /calculated_mol_wt=53966
     Region          67..476
                     /region_name="CYP90-like"
                     /note="plant cytochrome P450s similar to cytochrome P450
                     family 90, subfamily A, polypeptide 1, cytochrome P450
                     family 90, subfamily B, polypeptide 1, and cytochrome P450
                     family 90, subfamily D, polypeptide 2; cd11043"
                     /db_xref="CDD:410669"
     Site            order(129,133,140,182,286..287,290..291,294..295,298,352,
                     361,363,386,418..420,424..428,431..432)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410669"
     Site            order(206..207,286,289..290,294,359..362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410669"
     CDS             1..477
                     /gene="LOC107908362"
                     /coded_by="XM_041088420.1:139..1572"
                     /db_xref="GeneID:107908362"
ORIGIN      
        1 melsilliml llfiflssaf clirigtspk amegipgsmg wpiigeslsf lsdfsspsgi
       61 fsfmnkrqqr ygkvfksfvl grytvfmtgr easkilltgk dgmvslnlfy tgqqvlgpns
      121 llqtngeahk rlrrliaepl sidglkkyfh fintqaietl dqwtgkrvlv leeassftlk
      181 vignmimsle psgeeqerfr anfkiisssf asmpfkipgt afhrgikard smyamidsii
      241 akrrngeviq qdflesliik hskgtntidn ednkltdqqm kdniltllva ghdtttaalt
      301 wlvkflgenp avleqlrdeh lqiqanrkdg tnltwsevnn mpytnkvise tlrratilpw
      361 ysrkaaqdfe idgynikkgw sinldvvsih hdpetfpdpe kfdpsrfdap lktfsylgfg
      421 sgprmcpgmn lakleicifi hhlvckykwr alekddsvqp tlvrmpknky pimvepl
//
LOCUS       XP_016693773             552 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693773
VERSION     XP_016693773.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838284.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693773.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..552
                     /product="serine/threonine-protein kinase STY46 isoform
                     X1"
                     /calculated_mol_wt=62143
     Region          185..250
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          289..535
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(289..291,296..297,301,312,314,345,361..364,368,370,
                     408,410,412..413,415,426,429,444..447)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(289..291,296..297,301,312,314,345,361..364,368,408,
                     410,412..413,415,426)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(297,368,370,408,410,412,429,444..447)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(425..433,443..447)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..552
                     /gene="LOC107910450"
                     /coded_by="XM_016838284.2:499..2157"
                     /db_xref="GeneID:107910450"
ORIGIN      
        1 mdltegvges sspprsfgsf nsydvrndvf nrlvesgheq aisnpdfrdf ldshfnrlpa
       61 sygldvnmdr vedvllhhkl lalakdperr pvyhirflen lctkadaidd kqyinslspq
      121 sfddgdsekv vpshkrsrdh pvdfepcfkl edlnldvrkn skceddihlt enftkrqeiv
      181 hipthevifs ttdrpkllsq lsallsdigl nireahvfst tdgyslsvfv vdgwpvedtd
      241 glnkamekav arskgsfpgs shsppaieda setqeksgdw eidgrllkig ekiacgscgd
      301 lyrgiylgqd vavkilrseh lndtledefa qevailrevq hrnvvrfiga ctkfpqlsiv
      361 teympggsly dylhknhnvl klsqllkfai dvckgmeylh qshiihrdlk tanllmdtdn
      421 vvkvadfgva rflnqggvmt aetgtyrwma pevinhqpyd qkadvfsfav vlwelvtakv
      481 pydtmtplqa algvrqglrp elpenahpkl ldlmqrcwea apdkrpsfse itteletlfe
      541 evketteavn gn
//
LOCUS       XP_016693774             485 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase STY46 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693774
VERSION     XP_016693774.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838285.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693774.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..485
                     /product="serine/threonine-protein kinase STY46 isoform
                     X2"
                     /calculated_mol_wt=54650
     Region          118..183
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          222..468
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(222..224,229..230,234,245,247,278,294..297,301,303,
                     341,343,345..346,348,359,362,377..380)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(222..224,229..230,234,245,247,278,294..297,301,341,
                     343,345..346,348,359)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(230,301,303,341,343,345,362,377..380)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(358..366,376..380)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..485
                     /gene="LOC107910450"
                     /coded_by="XM_016838285.2:191..1648"
                     /db_xref="GeneID:107910450"
ORIGIN      
        1 mdrvedvllh hkllalakdp errpvyhirf lenlctkada iddkqyinsl spqsfddgds
       61 ekvvpshkrs rdhpvdfepc fkledlnldv rknskceddi hltenftkrq eivhipthev
      121 ifsttdrpkl lsqlsallsd iglnireahv fsttdgysls vfvvdgwpve dtdglnkame
      181 kavarskgsf pgsshsppai edasetqeks gdweidgrll kigekiacgs cgdlyrgiyl
      241 gqdvavkilr sehlndtled efaqevailr evqhrnvvrf igactkfpql sivteympgg
      301 slydylhknh nvlklsqllk faidvckgme ylhqshiihr dlktanllmd tdnvvkvadf
      361 gvarflnqgg vmtaetgtyr wmapevinhq pydqkadvfs favvlwelvt akvpydtmtp
      421 lqaalgvrqg lrpelpenah pklldlmqrc weaapdkrps fseittelet lfeevkette
      481 avngn
//
LOCUS       XP_040944355             441 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944355
VERSION     XP_040944355.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088421.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..441
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49983
     Region          128..221
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          277..>352
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..441
                     /gene="LOC107900712"
                     /coded_by="XM_041088421.1:113..1438"
                     /db_xref="GeneID:107900712"
ORIGIN      
        1 msnehvedvd qemyirdrel detesatpsv nplgnqpnie renvrdrdds hllriiadal
       61 qrvagtvpat istpttrrap ikelrkygat eflglkgidp staanwmest krvlqqlect
      121 preslicavs llqgeaylww esvirhlpte qvtwdlfqke fqkkyvgely iedkrqeflm
      181 lkqgnlsvid yerefsrlsr yaskfipted dsckrflrgl rneirvqlvs hritefvdlv
      241 erakmveqvl gldkkpeiar stgkragiti ssplpkrsre frdswkssfr sdrgdknrgk
      301 qtavstdsvk gpsrnidipd cehcgkkhlg ecwritrrcf rcgstdhfir dcqknegalp
      361 aasqrsvsta rgrgsgrgss lsrggnirrs sdiatqqsev kvparayvvr treegdahdv
      421 vtankeneas askgkekive e
//
LOCUS       XP_016693772             271 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin [Gossypium hirsutum].
ACCESSION   XP_016693772
VERSION     XP_016693772.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838283.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693772.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..271
                     /product="extensin"
                     /calculated_mol_wt=30192
     CDS             1..271
                     /gene="LOC107910448"
                     /coded_by="XM_016838283.2:49..864"
                     /db_xref="GeneID:107910448"
ORIGIN      
        1 mgkmgssmts lfltllvlav slnlpfetsa dytysspppp pkkyppppyh ykspppphkk
       61 pykykspppp tpvykykspp ppppsppkhp ykyksppppp psppkhpyky kspppppspp
      121 khpykykspp ppspvykyks ppppppsppk hpykyksppp pppsppkhpy kykspppppp
      181 sppkhpykyr sppppppspp khpykykspp ppppsppkhp ykyksppppp psppkypyky
      241 ksppppppvy kspppppphy vysspppphh y
//
LOCUS       XP_040944356             398 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944356
VERSION     XP_040944356.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088422.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="extensin isoform X1"
                     /calculated_mol_wt=43701
     CDS             1..398
                     /gene="LOC107951509"
                     /coded_by="XM_041088422.1:148..1344"
                     /db_xref="GeneID:107951509"
ORIGIN      
        1 mgkmgssmts lfltllvlav slslpfetsa dytysspppp pkknplppyh yksppppppv
       61 yspppppphk kpykyksppp ptpvykyksp pppppsppkh pykykspppp ppsppkhpyk
      121 ykspppppps ppkhpykyks ppppppsppk hpykyksppp pppvykyksp pppppsppkh
      181 pykykspppp ppsppkhpyk ykspppppps ppkhpykyks pppppsppkh pykykspppp
      241 ppsppkhpyk yksphhhhrh hpstltstsp hptvttqapl qvqvtstttt itpqaslqvq
      301 vptptvttqa plqvqvtptt ptitpqaplq vqvsttssss lqiqvssttt tplclrftps
      361 sspllshgfd rapiqgkdna vmqiklqkds lkriyler
//
LOCUS       XP_040944357             381 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944357
VERSION     XP_040944357.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088423.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..381
                     /product="extensin isoform X2"
                     /calculated_mol_wt=41714
     CDS             1..381
                     /gene="LOC107951509"
                     /coded_by="XM_041088423.1:148..1293"
                     /db_xref="GeneID:107951509"
ORIGIN      
        1 mgkmgssmts lfltllvlav slslpfetsa dytysspppp pkknplppyh yksppppppv
       61 yspppppphk kpykyksppp ptpvykyksp pppppsppkh pykykspppp ppsppkhpyk
      121 ykspppppps ppkhpykyks ppppppsppk hpykyksppp pppvykyksp pppppsppkh
      181 pykykspppp ppsppkhpyk ykspppppps ppkhpykyks pppppsppkh pykykspppp
      241 ppsppkhpyk yksphhhhrh hpstltstsp hptvttqapl qvqvtstttt itpqaslqvq
      301 vptptvttqa plqvqvtptt ptitpqaplq vqvsttssss lqiqvssttt tplclrftps
      361 sspllshgfd rapiqvvcrk r
//
LOCUS       XP_040944358             341 aa            linear   PLN 06-AUG-2024
DEFINITION  fructose-1,6-bisphosphatase, cytosolic [Gossypium hirsutum].
ACCESSION   XP_040944358
VERSION     XP_040944358.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088424.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..341
                     /product="fructose-1,6-bisphosphatase, cytosolic"
                     /calculated_mol_wt=37208
     Region          1..340
                     /region_name="PLN02262"
                     /note="fructose-1,6-bisphosphatase"
                     /db_xref="CDD:215147"
     Site            order(20,23,30,32..34,115..116,143)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:238214"
     Site            order(77,100..101,121,123,283)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238214"
     Site            order(124,126..127,218,246..247,251,267,277)
                     /site_type="active"
                     /db_xref="CDD:238214"
     CDS             1..341
                     /gene="LOC121214610"
                     /coded_by="XM_041088424.1:153..1178"
                     /db_xref="GeneID:121214610"
ORIGIN      
        1 mdhaadayrt dlmtitrfvl neqskypesr gdftillnhi vlgckfvcss vnkaglakli
       61 glageiniqg eeqkkldvls nevfikalvs sgrtcilvse ededaiivep skrgrycvvf
      121 dpldgssnid cgvsigtifg iymvkddhep tladvlqpgk qmvaagycmy gssctlvlst
      181 gkgvngftld pslgefilth pdiripkkgk iysvnegnak nwdgptakyv enckfpkdgs
      241 pskslryigs mvadvhrtll yggtfmypad kkspsgklrv lyevfpmsfl menaggqaft
      301 gkqraldlvp tkihdrspif lgsyddieei kalyaaegkk e
//
LOCUS       XP_016693766            1148 aa            linear   PLN 06-AUG-2024
DEFINITION  PH, RCC1 and FYVE domains-containing protein 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693766
VERSION     XP_016693766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838277.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1148
                     /product="PH, RCC1 and FYVE domains-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=123770
     Region          12..124
                     /region_name="PH_PLC_plant-like"
                     /note="Plant-like Phospholipase C (PLC) pleckstrin
                     homology (PH) domain; cd13365"
                     /db_xref="CDD:270171"
     Site            order(26,28,38,55,107)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270171"
     Site            order(29,31,35,37,39,54..55)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270171"
     Region          284..621
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          624..692
                     /region_name="FYVE"
                     /note="Protein present in Fab1, YOTB, Vac1, and EEA1;
                     smart00064"
                     /db_xref="CDD:214499"
     Region          827..>899
                     /region_name="DUF4200"
                     /note="Domain of unknown function (DUF4200); pfam13863"
                     /db_xref="CDD:464003"
     Region          874..909
                     /region_name="BRX_N"
                     /note="Transcription factor BRX N-terminal domain;
                     pfam13713"
                     /db_xref="CDD:404581"
     Region          1031..>1065
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     CDS             1..1148
                     /gene="LOC107910441"
                     /coded_by="XM_016838277.2:588..4034"
                     /db_xref="GeneID:107910441"
ORIGIN      
        1 madlvsygna qrdidqalia lkkgaqllky grkgkpkfcp frlsndetsl iwisssgers
       61 lklasvskii pgqrtavfqr ylrpekdyls fsliynngkr sldlickdkv eaevwiaglk
      121 alissgqggr skidgwsdgg lylddgrdlt snsasdssvs atrdisspev fvsfnpntsp
      181 kslrpensfh sershvaseg tnmdvkgsgs yafrvsvssa pstsshgsap ddydalgdvy
      241 iwgevicdna vkvvadknan ylsmradvll prpleynvvl dvhhvacgvk haalvtrqge
      301 vftwgeesgg rlghgvgkdv iqprlvesla vtsvdfvacg efhtcavtma gelytwgdgt
      361 hnagllghgt dvshwipkri sgpleglqva svtcgpwhta litstgqlft fgdgtfgvlg
      421 hgdresvpyp keveslsglr tiavacgvwh taaivevivs qssasvssgk lftwgdgdkn
      481 rlghgdkepr lkptcvpali dynfhkvacg hsltvgltts ghvftmgstv ygqlgnpcad
      541 gkipslvedk lsgecveeia cgayhvavlt srnevytwgk gangrlghgd vedrktptlv
      601 eglkdrhvkf iacgsnysaa iclhkwvsga eqsqcsacrq afgftrkrhn cyncglvhch
      661 scsskkalga alapnpgkpy rvcdscfakl nkvseagnnr rnsvprlsge nkdrldkaei
      721 rlsksatpnm dlikqldska akqgkktetf svvrsaqaps sfqlkdvvls npvdlrrtvp
      781 kpiltpsgvs srsvspfsrr pspprsatpi pttsglsfsk sitdslkktn ellnqevlkl
      841 rgqvetlrkr celqeselqk stkktqeamk vaaeesaksk aakevikslt aqlkdmaerl
      901 ppgvydteni kpaylpngle pngihypdan geghlrsesi ggsflaspta ldsstingnq
      961 spgqllkept gangrddhsg trllngsggl qaggsgvsaa vderefgsfg dgengtksrn
     1021 salaangnqv eaewieqyep gvyitlvvlr dgtrdlkrvr frnqrhpsir vhvvefygsg
     1081 mfkwcsymqp kkiwrapsrn lvvgkprkgi ravqrpcirq svdfwancpq igrssvsdfs
     1141 svrkggka
//
LOCUS       XP_016693767            1114 aa            linear   PLN 06-AUG-2024
DEFINITION  PH, RCC1 and FYVE domains-containing protein 1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693767
VERSION     XP_016693767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838278.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1114
                     /product="PH, RCC1 and FYVE domains-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=119932
     Region          12..124
                     /region_name="PH_PLC_plant-like"
                     /note="Plant-like Phospholipase C (PLC) pleckstrin
                     homology (PH) domain; cd13365"
                     /db_xref="CDD:270171"
     Site            order(26,28,38,55,107)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270171"
     Site            order(29,31,35,37,39,54..55)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270171"
     Region          284..621
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          624..692
                     /region_name="FYVE"
                     /note="Protein present in Fab1, YOTB, Vac1, and EEA1;
                     smart00064"
                     /db_xref="CDD:214499"
     Region          827..>899
                     /region_name="DUF4200"
                     /note="Domain of unknown function (DUF4200); pfam13863"
                     /db_xref="CDD:464003"
     Region          874..909
                     /region_name="BRX_N"
                     /note="Transcription factor BRX N-terminal domain;
                     pfam13713"
                     /db_xref="CDD:404581"
     Region          1031..1086
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     CDS             1..1114
                     /gene="LOC107910441"
                     /coded_by="XM_016838278.2:598..3942"
                     /db_xref="GeneID:107910441"
ORIGIN      
        1 madlvsygna qrdidqalia lkkgaqllky grkgkpkfcp frlsndetsl iwisssgers
       61 lklasvskii pgqrtavfqr ylrpekdyls fsliynngkr sldlickdkv eaevwiaglk
      121 alissgqggr skidgwsdgg lylddgrdlt snsasdssvs atrdisspev fvsfnpntsp
      181 kslrpensfh sershvaseg tnmdvkgsgs yafrvsvssa pstsshgsap ddydalgdvy
      241 iwgevicdna vkvvadknan ylsmradvll prpleynvvl dvhhvacgvk haalvtrqge
      301 vftwgeesgg rlghgvgkdv iqprlvesla vtsvdfvacg efhtcavtma gelytwgdgt
      361 hnagllghgt dvshwipkri sgpleglqva svtcgpwhta litstgqlft fgdgtfgvlg
      421 hgdresvpyp keveslsglr tiavacgvwh taaivevivs qssasvssgk lftwgdgdkn
      481 rlghgdkepr lkptcvpali dynfhkvacg hsltvgltts ghvftmgstv ygqlgnpcad
      541 gkipslvedk lsgecveeia cgayhvavlt srnevytwgk gangrlghgd vedrktptlv
      601 eglkdrhvkf iacgsnysaa iclhkwvsga eqsqcsacrq afgftrkrhn cyncglvhch
      661 scsskkalga alapnpgkpy rvcdscfakl nkvseagnnr rnsvprlsge nkdrldkaei
      721 rlsksatpnm dlikqldska akqgkktetf svvrsaqaps sfqlkdvvls npvdlrrtvp
      781 kpiltpsgvs srsvspfsrr pspprsatpi pttsglsfsk sitdslkktn ellnqevlkl
      841 rgqvetlrkr celqeselqk stkktqeamk vaaeesaksk aakevikslt aqlkdmaerl
      901 ppgvydteni kpaylpngle pngihypdan geghlrsesi ggsflaspta ldsstingnq
      961 spgqllkept gangrddhsg trllngsggl qaggsgvsaa vderefgsfg dgengtksrn
     1021 salaangnqv eaewieqyep gvyitlvvlr dgtrdlkrvr fsrrrfgehq aetwwsenre
     1081 kvyerynvhv sdkasisgqt arrsegalsp tsqv
//
LOCUS       XP_016690802             406 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 29 [Gossypium hirsutum].
ACCESSION   XP_016690802
VERSION     XP_016690802.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835313.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690802.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="U-box domain-containing protein 29"
                     /calculated_mol_wt=44715
     Region          11..63
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(12,15,17..20,39,43,52)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     CDS             1..406
                     /gene="LOC107908035"
                     /coded_by="XM_016835313.2:258..1478"
                     /db_xref="GeneID:107908035"
ORIGIN      
        1 mvkeelyitv psvfrcpisl dvmkspvslc tgvtydrssi qkwlesghdt cpatmqvlps
       61 kdfipnltlh rlinlwiqss tlrpgsnspr llpatppais evqakllmek verercddsl
      121 skvaefvscc eenrkfvarf dgfveviagv lkrkcveika letavrildl ilsengvteg
      181 lnklilksnq eskflsaivl ilqhgslnsk iksvrvldsl aldseskrri sdsqdlisil
      241 lqllktnnng slndavtsil ttisitrsir srliengive ilsnslteks lkllatlstc
      301 segrsaisse pkcaaaivek llkvskrgte davtvlwstc clnkeekvke avvkgngvtk
      361 ilvimqrege gnvkmmcrdl vkalravckd wclgsyetkt thirpc
//
LOCUS       XP_016693763             682 aa            linear   PLN 06-AUG-2024
DEFINITION  L-type lectin-domain containing receptor kinase S.6 [Gossypium
            hirsutum].
ACCESSION   XP_016693763
VERSION     XP_016693763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838274.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..682
                     /product="L-type lectin-domain containing receptor kinase
                     S.6"
                     /calculated_mol_wt=75738
     Region          17..250
                     /region_name="lectin_legume_LecRK_Arcelin_ConA"
                     /note="legume lectins, lectin-like receptor kinases,
                     arcelin, concanavalinA, and alpha-amylase inhibitor;
                     cd06899"
                     /db_xref="CDD:173887"
     Site            order(18,28,64,67,165,185,196,198..200,209..210,212,224)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173887"
     Site            122
                     /site_type="other"
                     /note="N-linked glycosylation site"
                     /db_xref="CDD:173887"
     Site            order(137,139,153)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173887"
     Region          362..627
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(362..366,370,382,384,416,432..435,439,441,485,487,
                     489..490,492,503,506,524..527)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(362..366,370,382,384,416,432..435,439,485,487,
                     489..490,492,503)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(366,439,441,485,487,489,506,524..527)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(502..509,520..527)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..682
                     /gene="LOC107910438"
                     /coded_by="XM_016838274.2:890..2938"
                     /db_xref="GeneID:107910438"
ORIGIN      
        1 mllsclflfw vnlfslfnft fpllppnnit lydgaffstd gicltqettc lpssspshig
       61 ralyaypirf idlrtrdnas ftcrfsfsii pnpvcpfgdg ivflvtsrpd sfsffngymg
      121 lpqlddlssq dpyfavefdt sfnpslgdin gnhvgvdvns ivslaavdvl skgfdlkrgk
      181 kitawieygd saklvqiwls yssskpptpl lvaqidlsrq fkeymhvgfs asnglgssmh
      241 lvdhwqfktf ttynnpmdsv elgycsmcfp edssntssqi ygthkrgfki gnmallfgsl
      301 vvsvviiivv pvlcfvavrk ersggrrskr eqtrvemtnv ptrwslaeik latmgfhrnr
      361 ivgegasavv yrgsvpsgga vavkrfdqsn rkafthnpft tefaamagcl khknlvqlqg
      421 wccegselvl vyeflangsl drllhrntds stflswslrl kvvlgvasal tflheecqrq
      481 iihrdvkscn imlddefnak lgdfglaevy ehncgsreat ipagtigyla peyvycgipt
      541 vktdvysfgv vvlevatgkr pvdddktvlv dwvwdlwaqk klleaadsrl sgrfivseme
      601 rmlvvglycv hpnhekrptv keaarilrge aplpvlpstr ptvriksnlc kysenilnig
      661 rdnspngdda gwltpkshfs ka
//
LOCUS       XP_016693764             366 aa            linear   PLN 06-AUG-2024
DEFINITION  15-cis-zeta-carotene isomerase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693764
VERSION     XP_016693764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..366
                     /product="15-cis-zeta-carotene isomerase, chloroplastic"
                     /calculated_mol_wt=40687
     Region          137..357
                     /region_name="COG4094"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443270"
     CDS             1..366
                     /gene="LOC107910439"
                     /coded_by="XM_016838275.2:145..1245"
                     /db_xref="GeneID:107910439"
ORIGIN      
        1 matclvvans lfrppkpilp hkhhplqpis shslpkspln stflkphfsh sdscrfrlia
       61 aaslgetdas sdeplplvge dsaafdlgtq nivswvyfti ilgvvlfvld viwidnstgf
      121 gkafidavst lsdsheivml alilifatvh sglasfrdmg ekilgkrayr vlfagvslpl
      181 avstvvyfin hryngvqlwq lqngpgvhql vwlsnfisff flypstfnll evaaveqpkv
      241 hlwetgimri trhpqmvgqv iwclahtiwi gnsvavaasv glighhlfgv wngdrrlavr
      301 hgeafevvkk rtsiipfaai ldgrqklpkd yykefirlpy laitamtlga yflhpvmqaa
      361 sfrlhw
//
LOCUS       XP_016691029             261 aa            linear   PLN 06-AUG-2024
DEFINITION  dof zinc finger protein DOF3.5 [Gossypium hirsutum].
ACCESSION   XP_016691029
VERSION     XP_016691029.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835540.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691029.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..261
                     /product="dof zinc finger protein DOF3.5"
                     /calculated_mol_wt=29305
     Region          31..81
                     /region_name="zf-Dof"
                     /note="Dof domain, zinc finger; pfam02701"
                     /db_xref="CDD:397014"
     CDS             1..261
                     /gene="LOC107908360"
                     /coded_by="XM_016835540.2:326..1111"
                     /db_xref="GeneID:107908360"
ORIGIN      
        1 mfilgdqmlq sdprvpilpi erkwksnvet apncprcasa ntkfcyynny slsqpryfck
       61 gcrrywtkgg slrnvpvggg crksrrgksr rervekrdqi smtdsknsts ssdgdsgnqp
      121 didlalvfak flnhntsfdq pevdeiatqe spneennsqk pvvgsipgsy ilqempetsq
      181 meafglqnll tgdemvlhed lwsdhdvatt tpdlewqplv qlqqfesfpv deqlkvsanl
      241 mnedwgsfdl sgfgifskps s
//
LOCUS       XP_016691028             182 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691028
VERSION     XP_016691028.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835539.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691028.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..182
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20579
     CDS             1..182
                     /gene="LOC107908359"
                     /coded_by="XM_016835539.2:42..590"
                     /db_xref="GeneID:107908359"
ORIGIN      
        1 mrsscistcs iykrlqnkln kmnasgparm lvcyvghhhg rllhcssclt lsndcifqdl
       61 ifyipfggke simnfrqnlm eamgqnvhfv idswmegdnl tasviwhlew kgkeiphttg
      121 cnffecqqid gkliiskiig veelpvkprd wvlkllkati vvfdkfpfpa erivaykvgg
      181 nt
//
LOCUS       XP_016693762            1078 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase RGI2 [Gossypium
            hirsutum].
ACCESSION   XP_016693762
VERSION     XP_016693762.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693762.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1078
                     /product="LRR receptor-like serine/threonine-protein
                     kinase RGI2"
                     /calculated_mol_wt=117549
     Region          8..1034
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          69..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          238..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          262..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          286..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          334..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          358..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..453
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          454..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          478..501
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          502..525
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          526..549
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          550..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          574..597
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          598..622
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          623..645
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          646..669
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1078
                     /gene="LOC107910437"
                     /coded_by="XM_016838273.2:453..3689"
                     /db_xref="GeneID:107910437"
ORIGIN      
        1 mssngigiil lflnfvssis glnheglsll swlstfnsss aaaffsswnp shsnpctwdy
       61 ikcnhggfvt eitisninlh ttfptqivsf qhltalvlsr gnltgeipps ignlsslvtl
      121 nlsfnaisgn ipaqigmlsd lqslslntns lhggipreig ncsklqllel fdnhlsgkip
      181 teigqlvale ifraggnsgi egeiptqisn ckrlaflgla dtgisgqipt slgelknlkt
      241 lsiytsklng hippeignss aledlflygn qlsgeipeev gslknlkrvl lwqnqlsgri
      301 pnslgncssl viidislnyl sgevpsslan lvaleellls gnnlsgeipp fignfsslkq
      361 leldnnrfsg eipatigqlk elsqffawqn qlrgsiptel anceklqhld ishnfitgsv
      421 psslfnlknl tqllllsnrl sgeipqtlgn ctsltrlrmg snnfsghips aigllhslsy
      481 lelsenqftg eippdigncs hlemvdlran klqgtipasf efladlnild lsmnsitgti
      541 phnlgkltsl nkmvisgnsi tgfipkslgn ckdlqlldis rnkiagsipe qigllqgldi
      601 llnlswnalt gpmpesfsnl sklanldlsh nmltgslmvl ggldnlvsld vsfnnfsgvl
      661 pdtkffhnlp stafsgnqel cinqtecgss gsphskrstr nlimrtlfsv tvtilvviva
      721 vylfirvhga kheddfldwh ftpfqklnfs vndiltslsd sniigkgcsg vvyrvetttk
      781 qvvavkklwp ikngefperd lfsaevqtlg sirhknivrl lgccdngktr lllfdyisng
      841 slagllhekn mfldwdaryk iilgaaqgla ylhhdcippi vhrdiksnni lvgpqfeafl
      901 adfglaklid vsesprasni iagsygyiap eygynmrite ksdvysfgvv llevltgmep
      961 tdnsipdgvh iitwintevr ekrkdyttil dqmllirsst qiqemlqvlg vaflcvnpcp
     1021 eerptmkdvt amlkeirnen ddsekpnllc kritnnpeat vqcssfsrss eplissps
//
LOCUS       XP_016693761             348 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein C57A10.07 [Gossypium hirsutum].
ACCESSION   XP_016693761
VERSION     XP_016693761.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693761.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..348
                     /product="uncharacterized protein C57A10.07"
                     /calculated_mol_wt=39771
     Region          <167..>243
                     /region_name="DUF218"
                     /note="DUF218 domain; cl46518"
                     /db_xref="CDD:480858"
     CDS             1..348
                     /gene="LOC107910436"
                     /coded_by="XM_016838272.2:324..1370"
                     /db_xref="GeneID:107910436"
ORIGIN      
        1 mnnypfgsns pksfnayprg dfdielgnik rtrrskvssf ypvrmiksla nrlhyyyklh
       61 pllvffvsla fgvtiligls lyehhyrmlr nyrkldegfs nyypyaklkn lvmvaghsvy
      121 tssscekvdk edswflepyq knpgqaatfl thikegvest aqdgaalllf sggetrkdag
      181 prseaqsywt vadskgwfgk eesvkwralt eehardsfen llfsicrfre ltgtypqnit
      241 vvsydfkeer fanlhrsaig fpesqffyrg tpasstakea alkgealvrt qfqhdpygci
      301 gllkkkkvgr dpfhrsipyp necpeieglf rycgtapyqg slpwayqn
//
LOCUS       XP_016693760             143 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogen-related protein [Gossypium hirsutum].
ACCESSION   XP_016693760
VERSION     XP_016693760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..143
                     /product="pathogen-related protein"
                     /calculated_mol_wt=15740
     Region          <39..103
                     /region_name="COG5485"
                     /note="Predicted ester cyclase [General function
                     prediction only]"
                     /db_xref="CDD:444236"
     CDS             1..143
                     /gene="LOC107910435"
                     /coded_by="XM_016838271.2:464..895"
                     /db_xref="GeneID:107910435"
ORIGIN      
        1 mmmeikklgg gynpqlqtsl peelrcydpe ketdesshka fvttfprgfa fevlkvytgp
       61 peivlkfrhw gynegpfkgh aptgdlvefy gvaiyqvdeg mkigrvelfy ergellggll
      121 kgaaidssam eaasscpilr ntg
//
LOCUS       XP_016693759            1027 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693759
VERSION     XP_016693759.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838270.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693759.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1027
                     /product="pentatricopeptide repeat-containing protein
                     At3g09040, mitochondrial"
                     /calculated_mol_wt=114092
     Region          <76..397
                     /region_name="PLN03081"
                     /note="pentatricopeptide (PPR) repeat-containing protein;
                     Provisional"
                     /db_xref="CDD:215563"
     Region          97..122
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          124..153
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          199..222
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          227..254
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          239..1020
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          260..288
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          291..318
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          363..390
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          394..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          427..456
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          462..491
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          495..522
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          528..557
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          567..592
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          592..638
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          594..622
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          700..727
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          733..762
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          768..797
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          802..829
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          835..864
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          870..897
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1027
                     /gene="LOC107910433"
                     /coded_by="XM_016838270.2:83..3166"
                     /db_xref="GeneID:107910433"
ORIGIN      
        1 mrlkflprtl ptsesssflh rslfstilpq sthssgspqh erythllrlc lrqcrevkth
       61 ymfdemsqtt eralkagkli haqglelgfw skgllgnail dlyakcgdvg saekvfhsle
      121 krdvfswnsv ismyskrglv devvksigpl lnsgvlpnef tlstllsaca rlkdiefgrl
      181 vhccvvkmgl etssfcegal idmyskcnyv tdarkvfdgs mdldtvswts mvagyvqvgl
      241 leealevces mlkagrvpdq lafvtiinaf vglgrlddal alfsqmpnpn vvawnvmisg
      301 hakrgyevea ikifqnmras gvkstrstlg smfsviasla slefglllhg eaikqglnsn
      361 vyvgsslinm yakcdkidaa kkvfdelpek nvvlwnamlg gyaqngyade vielfsqmkg
      421 snsqpdefty tsilsacacl gcletgrlfh afiiknkfas nlfvvnalvd myaksgalke
      481 arqqfeiikd rdnvswnaii vgyvqdenel eafnmfrrmi lygfvpdevs lasilsacan
      541 vqslelgkqi hclavksgld kslyagssli dmyaksgair darkvlhgmp qrsaisinam
      601 iagyapkdle eaiillqemq vdglkpsevt ftslldacne phklnlgkqi hcciikrgll
      661 sdeeflgvsl lcmylnsnsl rdtdarilfe efqnrksavl wtalisghtq ngcneealhl
      721 fremrsynvi pdqatfvsvl racavlsslq egrqihtlih htgyaldelt tsalvdmyak
      781 cgevkhsakv feemnskngi scwnsmivgl akngyaedal riffemkqaq vmpddvtylg
      841 vltacshagk vyegrrifdm mvnygiqprv dhcacivdll grwgflkeae dfidslkfep
      901 damiwaallg acrihgdeir grraaeklie lepensspyv llsniyaatg nwdevnalrr
      961 kmrekrvqky pgcswivvgq ktnlfiagdk shpkadeiee ilkdlvvlmr edgcapevdt
     1021 lllhede
//
LOCUS       XP_016693758             204 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A [Gossypium
            hirsutum].
ACCESSION   XP_016693758
VERSION     XP_016693758.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838269.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693758.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="protein TRACHEARY ELEMENT
                     DIFFERENTIATION-RELATED 7A"
                     /calculated_mol_wt=22290
     CDS             1..204
                     /gene="LOC107910432"
                     /coded_by="XM_016838269.2:89..703"
                     /db_xref="GeneID:107910432"
ORIGIN      
        1 maspinfnfp yfspppphqp fqpppppyhp tspppppphn pvsppppphh pitpppphvh
       61 ppppphvrpp ppaplppaps psnhtviiiv fvscggvffl aflaaalfcf lkkkkkkktv
      121 kemdrvhvde hlkvkeaivp gpdgpravll eieddihidh ediiktqkte kgsnlhstlq
      181 nlkdieegtk assssnhhql ehka
//
LOCUS       XP_016693756             594 aa            linear   PLN 06-AUG-2024
DEFINITION  coronatine-insensitive protein 1 [Gossypium hirsutum].
ACCESSION   XP_016693756
VERSION     XP_016693756.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838267.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693756.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..594
                     /product="coronatine-insensitive protein 1"
                     /calculated_mol_wt=67446
     Region          16..56
                     /region_name="F-box_5"
                     /note="pfam18511"
                     /db_xref="CDD:436553"
     Region          75..121
                     /region_name="Transp_inhibit"
                     /note="Transport inhibitor response 1 protein domain;
                     pfam18791"
                     /db_xref="CDD:465867"
     Region          77..>173
                     /region_name="FBXL3_LRR-like"
                     /note="Leucine-rich repeat domain of FBXL3 and related
                     proteins; cl45928"
                     /db_xref="CDD:480268"
     Region          116..>236
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          142..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          168..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          196..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          224..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          295..318
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          311..>496
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          319..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          343..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          378..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          403..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          436..462
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          463..487
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          488..512
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..594
                     /gene="LOC107910429"
                     /coded_by="XM_016838267.2:554..2338"
                     /db_xref="GeneID:107910429"
ORIGIN      
        1 mgenynelkk stasqtgltd vvlgwvilyi ddpedrsavs lvcrrwyeld altrkhvtva
       61 lcyttsperl rrrfphlesl klkgkprapm fdmipedwgg yvtpwvkeia enltclksvh
      121 frrmivndsd levlgrsrge vlrclkldkc sgfstdgllh vgrlcrqlrt lfledssiie
      181 kdgrwiheia mnnsvletln fymtdlvkvs fedlqliarn crnlvsvkis dceildlvgf
      241 fhaaavleef nggpfydqpd gyaavtfpsr lcrlgltymg knempivfpf aplfkeldll
      301 yalldtedhc lliqrcpnle vlktrnvigd rglevvarsc kqlkrlriea daeeegmede
      361 glvsqtglma laqgclkleh lavyvsditn asleyigtyl knmcdfrlvl ldqkeritdl
      421 pldkgvrall rgcgklrrfa lhlrpggltd aglgyigkys wnirwmllgy vgesdaglle
      481 fskgcpklqk leiggcffse halaaamirl tslrylwvpg yrelsqssrd llamarlfwn
      541 ielvparrvv ktdrvgevvv vehpghllay yslegpridf pdlifrlnyq rilv
//
LOCUS       XP_040944359             379 aa            linear   PLN 06-AUG-2024
DEFINITION  alcohol dehydrogenase class-P [Gossypium hirsutum].
ACCESSION   XP_040944359
VERSION     XP_040944359.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088425.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..379
                     /product="alcohol dehydrogenase class-P"
                     /calculated_mol_wt=40942
     Region          8..376
                     /region_name="alcohol_DH_plants"
                     /note="Plant alcohol dehydrogenase; cd08301"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,95,143,177,297,321)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,177)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176261"
     Site            order(48..49,177,181,202..206,226..227,231,271..272,
                     276..277,295..296,320..322,372)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176261"
     CDS             1..379
                     /gene="LOC107910431"
                     /coded_by="XM_041088425.1:235..1374"
                     /db_xref="GeneID:107910431"
ORIGIN      
        1 mstagqvirc kaavawesgk plsieeveva ppqkdevrik ilftslchtd vyfwdakgqn
       61 plfprilghe aggivesvge gvtdlkpgdh vlpiftgeck ecphclsees nmcdllrint
      121 drvgmindgk srfsingkpi yhflgtstfs eytvvhvgqv akinphapld kvcvlscgms
      181 tgfgatvnva kpkkgqsvai fglgavglaa aegarvsgas riigidlnps rfeqakkfgv
      241 tefvnpkdyn kpvqevivem tgggvdrsve ctgsiqamis afecvhdgwg vavlvgvpnk
      301 ddafkthpvn llnertlkgt ffgnykprsd ipavvekymn keleldkfit htvpfseink
      361 afelmlageg lrcvirmda
//
LOCUS       XP_016693757             379 aa            linear   PLN 06-AUG-2024
DEFINITION  alcohol dehydrogenase 1 [Gossypium hirsutum].
ACCESSION   XP_016693757
VERSION     XP_016693757.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838268.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693757.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..379
                     /product="alcohol dehydrogenase 1"
                     /calculated_mol_wt=40966
     Region          8..376
                     /region_name="alcohol_DH_plants"
                     /note="Plant alcohol dehydrogenase; cd08301"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,95,143,177,297,321)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,177)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176261"
     Site            order(48..49,177,181,202..206,226..227,231,271..272,
                     276..277,295..296,320..322,372)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176261"
     CDS             1..379
                     /gene="LOC107910430"
                     /coded_by="XM_016838268.2:283..1422"
                     /db_xref="GeneID:107910430"
ORIGIN      
        1 mstagqvirc raavawesgk plsieeveva ppqkdevrik ilftslchtd vyfwdakgqn
       61 plfprilghe aggivesvge gvtdlkpgdh vlpiftgeck ecphclsees nmcdllrint
      121 drgemindgk srfsingkpi yhflgtstfs eytvvhvgqv akinpeapld kvcvlscgms
      181 tgfgatvnva kpkkgqsvai fglgavglaa aegarvsgas riigvdlnps rfeqakkfgv
      241 tefvnpkdyn kpvqeaivem tgggvdrsve ctgsiqamis afecvhdgwg vavlvgvpnk
      301 ddafkthpvn llnektvkgt ffgnykprsd ipavvekymn keleldkfit htvpfseink
      361 afelmlageg lrcvirmde
//
LOCUS       XP_016693754             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693754
VERSION     XP_016693754.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838265.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693754.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..110
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11796
     CDS             1..110
                     /gene="LOC107910428"
                     /coded_by="XM_016838265.2:494..826"
                     /db_xref="GeneID:107910428"
ORIGIN      
        1 mhspysagpp pngrlaarna itarfgygai tsigcnshfp reaaimdsal vsyflfhslp
       61 sstfrsidsp tlffqskldt pysalgcler kvcycnlnsl acliafsths
//
LOCUS       XP_016693752             547 aa            linear   PLN 06-AUG-2024
DEFINITION  auxin efflux carrier component 6 [Gossypium hirsutum].
ACCESSION   XP_016693752
VERSION     XP_016693752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838263.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..547
                     /product="auxin efflux carrier component 6"
                     /calculated_mol_wt=59709
     Region          10..542
                     /region_name="Mem_trans"
                     /note="Membrane transport protein; pfam03547"
                     /db_xref="CDD:308904"
     CDS             1..547
                     /gene="LOC107910425"
                     /coded_by="XM_016838263.2:43..1686"
                     /db_xref="GeneID:107910425"
ORIGIN      
        1 mitggdfykv mcamvplyfa miiaygsvkw wrifspeqcs ginrfvavfa vpvlsfhfia
       61 qnnpyqmdtk fiiadtvskv lvlallsvwa iffpggsldw litlfslatl pntlvmgipl
      121 lnamygdftq slmvqlvvlq ciiwytlllf lfeyraatll iktqfpgpta atiskfeldn
      181 dvisldgrdp lrtesetdin grirvrirrs tssapesals ssicltpras nlsnadifsv
      241 ntpggpnnne ivfcngdmgf gyravsprls gyassdaysl qptprasnfn emdvittaag
      301 ntpiwmrspv aggkvfrqps pvvpptkmvw dcqdgggddn rqgfkdlgek eisfrdntki
      361 tvaemngdgk egevgskqem pkaivmvrli livvgrklsr npntyssilg llwslisfkw
      421 nvgmpslvky sikiisdagl gmamfslglf malqpriiac gtkratmgmv irflcgpvim
      481 stvsialglr gaklhaaivq aalpqgivpf vfareyglhp dilstgvifg mlvslpvtll
      541 yyillgi
//
LOCUS       XP_016693753             379 aa            linear   PLN 06-AUG-2024
DEFINITION  alcohol dehydrogenase class-P [Gossypium hirsutum].
ACCESSION   XP_016693753
VERSION     XP_016693753.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838264.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693753.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..379
                     /product="alcohol dehydrogenase class-P"
                     /calculated_mol_wt=40977
     Region          8..376
                     /region_name="alcohol_DH_plants"
                     /note="Plant alcohol dehydrogenase; cd08301"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,95,143,177,297,321)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,177)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176261"
     Site            order(48..49,177,181,202..206,226..227,231,271..272,
                     276..277,295..296,320..322,372)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176261"
     CDS             1..379
                     /gene="LOC107910426"
                     /coded_by="XM_016838264.2:258..1397"
                     /db_xref="GeneID:107910426"
ORIGIN      
        1 mstagqvirc kaavawesgk plsieeveva ppqkdevrik ilftslchtd vyfwdakgqn
       61 plfprilghe aggivesvge gvtdlkpgdh vlpiftgeck ecphclsees nmcdllrint
      121 drgemindgk srfsingkpi yhflgtstfs eytvvhvgqv akinpeapld kvcvlscgms
      181 tgfgatvnva kpkkgqsvai fglgavglaa aegarvsgas riigvdlnps rfelaknfgv
      241 tefvnpkdhn kpvqeviaem tgggvdrsve ctgsiqamis afecvhdgwg vavlvgvpnk
      301 ddafkthpvn llnertlkgt ffgnykprtd ipavverymn keleldkfit hsvpfseink
      361 afeymlageg lrcmirmda
//
LOCUS       XP_040944360             379 aa            linear   PLN 06-AUG-2024
DEFINITION  alcohol dehydrogenase class-P [Gossypium hirsutum].
ACCESSION   XP_040944360
VERSION     XP_040944360.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088426.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..379
                     /product="alcohol dehydrogenase class-P"
                     /calculated_mol_wt=41035
     Region          8..376
                     /region_name="alcohol_DH_plants"
                     /note="Plant alcohol dehydrogenase; cd08301"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,95,143,177,297,321)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176261"
     Site            order(47,49,69,177)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176261"
     Site            order(48..49,177,181,202..206,226..227,231,271..272,
                     276..277,295..296,320..322,372)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176261"
     CDS             1..379
                     /gene="LOC107910427"
                     /coded_by="XM_041088426.1:289..1428"
                     /db_xref="GeneID:107910427"
ORIGIN      
        1 mstagqvirc raavawesgk plsieeveva ppqkdevrik ilftslchtd vyfwdakgqn
       61 plfprilghe aggivesvge gvtdlkpgdh vlpiftgeck ecphclsees nmcdllrint
      121 drvgmindgk srfsingkpi yhflgtstfs eytvvhvgqv akinphapld kvcvlscgms
      181 tgfgatvnva kpkkgqsvai fglgavglaa aegarvsgas riigvdlnps rfeqakkfgv
      241 tefvnpkdyn kpvqevivem tgggvdrsve ctgsiqamis afecvhdgwg vavlvgvpnk
      301 ddefkthpvn llyektlkgt ffgnykprsd ipavvekymn keleldkfit htvpfseink
      361 afelmlageg lrcvirmda
//
LOCUS       XP_016693751            1039 aa            linear   PLN 06-AUG-2024
DEFINITION  putative transcription elongation factor SPT5 homolog 1 [Gossypium
            hirsutum].
ACCESSION   XP_016693751
VERSION     XP_016693751.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838262.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693751.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1039
                     /product="putative transcription elongation factor SPT5
                     homolog 1"
                     /calculated_mol_wt=115335
     Region          91..178
                     /region_name="Spt5_N"
                     /note="Spt5 transcription elongation factor, acidic
                     N-terminal; pfam11942"
                     /db_xref="CDD:463406"
     Region          184..266
                     /region_name="NGN_Euk"
                     /note="Eukaryotic N-Utilization Substance G (NusG)
                     N-terminal (NGN) domain, including plant KTF1 (KOW
                     domain-containing Transcription Factor 1); cd09888"
                     /db_xref="CDD:193577"
     Site            order(196,199..200,202..204,206,215..220,231,233,261..262,
                     265)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:193577"
     Region          277..314
                     /region_name="KOW_Spt5_1"
                     /note="KOW domain of Spt5, repeat 1; cd06081"
                     /db_xref="CDD:240505"
     Region          425..475
                     /region_name="KOW_Spt5_2"
                     /note="KOW domain of Spt5, repeat 2; cd06082"
                     /db_xref="CDD:240506"
     Region          476..526
                     /region_name="KOW_Spt5_3"
                     /note="KOW domain of Spt5, repeat 3; cd06083"
                     /db_xref="CDD:240507"
     Region          604..646
                     /region_name="KOW_Spt5_4"
                     /note="KOW domain of Spt5, repeat 4; cd06084"
                     /db_xref="CDD:240508"
     Region          707..755
                     /region_name="KOW_Spt5_5"
                     /note="KOW domain of Spt5, repeat 5; cd06085"
                     /db_xref="CDD:240509"
     Region          773..901
                     /region_name="CTD"
                     /note="Spt5 C-terminal nonapeptide repeat binding Spt4;
                     smart01104"
                     /db_xref="CDD:215026"
     Region          982..1039
                     /region_name="KOW_Spt5_6"
                     /note="KOW domain of Spt5, repeat 6; cd06086"
                     /db_xref="CDD:240510"
     CDS             1..1039
                     /gene="LOC107910424"
                     /coded_by="XM_016838262.2:138..3257"
                     /db_xref="GeneID:107910424"
ORIGIN      
        1 marrrdeedd dvddeeyede edqlvddedy eededvgrgr ggssrkrrrs dfiddvaeed
       61 deedeyeddd devygggskk hskaprvgsq ffdleaqvds deeeeeeege ddfivetgad
      121 lpdedvgrrm hrrplpmred eqedvealer siqaryarss hteydeettd veqqallpsv
      181 rdpklwmvkc aigreretav clmqkfidkg velqirsvia ldhlknyiyi eadkeahvre
      241 avkglrnifp akimlvpire mtdvlsvesk aidlsrdtwv rmkigtykgd laqvvdvdnv
      301 rqrvtvklip ridlqalank legrevakkk afvlpprlln vdearelhir verrrdpvtg
      361 dyfenidgml fkdgflyktv smksisaqni kptfdelekf rapstngvem vglstlfanr
      421 kkghfmkgda vivvkgdlkn lkgwvekvee envhirpemk glpktlavne kelckyfepg
      481 nhvkvvsgtk egatgmvvkv eqhvliilsd ttkehirvfa ddvvessevt tgitkigeye
      541 lhdlvlldnn sfgviirves eafqvlkgvp erpevslvkl reikckvdkk fnvqeryrnt
      601 vavkdvvril egpckgkqgp vehiykgvlf vydrhhleha gficakadsc civggsrsng
      661 drnggslsrf ggfkapsrvp psprrfsrgg ppfdsggrhr ggrgghdalv gtsvkirqgp
      721 ykgyrgrvvd ikgqsvrvel esqmkvvtvd rnsisdnvvi stphressry gmgsetpmhp
      781 srtplhpymt pmrdpgatpi hdgmrtpmrd rawnpyapms pprdnweegn paswgtspqy
      841 qpgsppsray eaptpgsgwa sspggsysea giprdsssay anapspymps tpsgqpmtrs
      901 sgsyipgtpg gqpmtpgtgl nmmspvigad negpwfmpdi lvnvrksgde slgviqevls
      961 dgsckvalgp ngsgdtviam psemevvppr ksdkikimgg slrgvtgkli gvdgtdgivr
     1021 iddsldvkil dlvilaklh
//
LOCUS       XP_016693750             454 aa            linear   PLN 06-AUG-2024
DEFINITION  probable glucuronosyltransferase GUT1 [Gossypium hirsutum].
ACCESSION   XP_016693750
VERSION     XP_016693750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838261.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..454
                     /product="probable glucuronosyltransferase GUT1"
                     /calculated_mol_wt=51898
     Region          81..377
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..454
                     /gene="LOC107910423"
                     /coded_by="XM_016838261.2:189..1553"
                     /db_xref="GeneID:107910423"
ORIGIN      
        1 mspkprifsa hshtaplctr thqiaalilv tatffftrlf dqsfppspcy ldrhlnlhva
       61 ktndaghllw pdrgygshls lkiyvydene idglkdllyg rdgsissnac lkgqwgsqvk
      121 ihrlllesrf rtrkkeeadl ffvpayvkcv rmlgglndke inqtyvkvls qmpyfrrsgg
      181 rdhifvfpsg agahlfrswa tyinrsiilt pegdrtdkkd ssafntwkdi iipgnvddgm
      241 tktgatvfqp lplskrkyla nylgraqkkv grlklielak qypdklecpe lqfsgpnklg
      301 rveyfqhlgn skfclaprge sswtlrfyes ffvecvpvil sdqvelpfqn vidyteisik
      361 wpstsigpel ldylasipde vieqiigrgr qvrclwvyap dsepcstira lmwelqrkvr
      421 qfhqsaetfw lrngsvvnrn lvefakwkpp mplp
//
LOCUS       XP_016693747             274 aa            linear   PLN 06-AUG-2024
DEFINITION  psbP domain-containing protein 4, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693747
VERSION     XP_016693747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838258.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..274
                     /product="psbP domain-containing protein 4, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=29606
     Region          40..274
                     /region_name="PLN00066"
                     /note="PsbP domain-containing protein 4; Provisional"
                     /db_xref="CDD:215046"
     CDS             1..274
                     /gene="LOC107910422"
                     /coded_by="XM_016838258.2:212..1036"
                     /db_xref="GeneID:107910422"
ORIGIN      
        1 mgttlfsgcr sfswlqlsls csfahsssse ngisrpkavp tsrgnglvdk ekdnslgiss
       61 rrsllitgis vasssvlgfp gegmavvkqg llagripgls epdeqgwrty rrpddksggh
      121 gvgwspiipy sfsvpqdfee vpvsiadlgg teidlrfass kegrlfviva pvlrfadnlg
      181 ddatiqkigp pekvisafgp evigeniegk vlsmntvehd grmyyqyele pphvlitata
      241 agnrlylfsv tgsglqwkrh yqdlkrises frvi
//
LOCUS       XP_040944361             179 aa            linear   PLN 06-AUG-2024
DEFINITION  psbP domain-containing protein 4, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944361
VERSION     XP_040944361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088427.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="psbP domain-containing protein 4, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=20036
     Region          <11..179
                     /region_name="PsbP"
                     /note="cl03356"
                     /db_xref="CDD:446075"
     CDS             1..179
                     /gene="LOC107910422"
                     /coded_by="XM_041088427.1:795..1334"
                     /db_xref="GeneID:107910422"
ORIGIN      
        1 mrhrkfvkkt gwrtyrrpdd ksgghgvgws piipysfsvp qdfeevpvsi adlggteidl
       61 rfasskegrl fvivapvlrf adnlgddati qkigppekvi safgpevige niegkvlsmn
      121 tvehdgrmyy qyelepphvl itataagnrl ylfsvtgsgl qwkrhyqdlk risesfrvi
//
LOCUS       XP_016693749             173 aa            linear   PLN 06-AUG-2024
DEFINITION  psbP domain-containing protein 4, chloroplastic isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016693749
VERSION     XP_016693749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838260.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="psbP domain-containing protein 4, chloroplastic
                     isoform X3"
                     /calculated_mol_wt=19198
     Region          <5..173
                     /region_name="PsbP"
                     /note="cl03356"
                     /db_xref="CDD:446075"
     CDS             1..173
                     /gene="LOC107910422"
                     /coded_by="XM_016838260.2:501..1022"
                     /db_xref="GeneID:107910422"
ORIGIN      
        1 mnktgwrtyr rpddksgghg vgwspiipys fsvpqdfeev pvsiadlggt eidlrfassk
       61 egrlfvivap vlrfadnlgd datiqkigpp ekvisafgpe vigeniegkv lsmntvehdg
      121 rmyyqyelep phvlitataa gnrlylfsvt gsglqwkrhy qdlkrisesf rvi
//
LOCUS       XP_016693745             252 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET1 [Gossypium hirsutum].
ACCESSION   XP_016693745
VERSION     XP_016693745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838256.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="bidirectional sugar transporter SWEET1"
                     /calculated_mol_wt=27837
     Region          6..94
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; cl46784"
                     /db_xref="CDD:481124"
     Region          131..213
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..252
                     /gene="LOC107910421"
                     /coded_by="XM_016838256.2:662..1420"
                     /db_xref="GeneID:107910421"
ORIGIN      
        1 mevlhfvfgv fgnatalflf lsptitfkri irsksteqfs gipyvmtlln cllsawyglp
       61 fvsknnilvs tingtgaaie siyvlifiiy apkkekakif glftfvltvf tavalislfs
      121 lhgngrklfc glaatifsii myasplsimr lviktksvef mpfflslfvf lcgtswfiyg
      181 llgrdafvav pngfgcglgt mqlilyfiyr nnkgsqeikk psgngtsiei gekkprqdkq
      241 qpngkvpqde qv
//
LOCUS       XP_016693740             917 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor SEUSS [Gossypium hirsutum].
ACCESSION   XP_016693740
VERSION     XP_016693740.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838251.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693740.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..917
                     /product="transcriptional corepressor SEUSS"
                     /calculated_mol_wt=99581
     Region          340..594
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          <703..>803
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..917
                     /gene="LOC107910419"
                     /coded_by="XM_016838251.2:833..3586"
                     /db_xref="GeneID:107910419"
ORIGIN      
        1 mvplgsstpi ggaqsvpssl lrtnsgmlgs qggglpsqsg fpslvsprtq fnnmnmlgnv
       61 pnvssllnqs fgnggpnpql sgpgsgqrgg idsgaesdpl snvgtgmgfn asssfvpsnm
      121 anpgssgqvq sqqysnlfgn hilpdqqqpq qpesqqfqhg qqgmqqvsap hntqqgqqqq
      181 qqqqqfqsir ggmagvgavk lepqltndqh sqpqqlqtlr dlapvklepq qippsrtlaq
      241 vkmepqhsdq sflhqqqqqq qqqqqqllqm srqppqtaaa qisllhqqrl lqlqqqhhhq
      301 qllkampqqr pqlpqqfqqq nlplrspvks ayepgmcarr lthymyqqqh rpednniefw
      361 rkfvaeyfap nakkkwcvsm ygngrqttgv fpqdvwhcei cnrkpgrgfe atvevlprlf
      421 kikyesgtle ellyvdmpre yqnssgqivl dyakaiqesv feqlrvvrdg qlrivfspdl
      481 kicswefcar rheeliprrl lipqvsqlga aaqkyqaatq nastnlsapd lqnncnlfva
      541 sarqlakale vplvndlgyt kryvrclqis evvnsmkdli dysretrtgp meslakfprr
      601 tstssgfhaq sqqpeeqhqq qqqtpqqqmm tqssngdqss aqasgmqlaa nngvanvnns
      661 lnvasastsa gtiagplhqn smnsrqqnsm nnasssyggn svqipspgss stipqtqanp
      721 spfqsptpss snnppqaphg alaasshmss anspamnmpm qqpalssead pnesqssvqk
      781 iiheimssql nntggmvgag tlgndvksvn gmlppsnnmv lsggntlvan gtisnnsvig
      841 gvgfgsmsgg lgqsamvngi ratmgnnpvm ngrmgmaqma rdqlrnhqqq dmgnqllngl
      901 gavngfnnyq fdwkpsp
//
LOCUS       XP_016693741             917 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor SEUSS [Gossypium hirsutum].
ACCESSION   XP_016693741
VERSION     XP_016693741.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838252.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693741.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..917
                     /product="transcriptional corepressor SEUSS"
                     /calculated_mol_wt=99581
     Region          340..594
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          <703..>803
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..917
                     /gene="LOC107910419"
                     /coded_by="XM_016838252.2:773..3526"
                     /db_xref="GeneID:107910419"
ORIGIN      
        1 mvplgsstpi ggaqsvpssl lrtnsgmlgs qggglpsqsg fpslvsprtq fnnmnmlgnv
       61 pnvssllnqs fgnggpnpql sgpgsgqrgg idsgaesdpl snvgtgmgfn asssfvpsnm
      121 anpgssgqvq sqqysnlfgn hilpdqqqpq qpesqqfqhg qqgmqqvsap hntqqgqqqq
      181 qqqqqfqsir ggmagvgavk lepqltndqh sqpqqlqtlr dlapvklepq qippsrtlaq
      241 vkmepqhsdq sflhqqqqqq qqqqqqllqm srqppqtaaa qisllhqqrl lqlqqqhhhq
      301 qllkampqqr pqlpqqfqqq nlplrspvks ayepgmcarr lthymyqqqh rpednniefw
      361 rkfvaeyfap nakkkwcvsm ygngrqttgv fpqdvwhcei cnrkpgrgfe atvevlprlf
      421 kikyesgtle ellyvdmpre yqnssgqivl dyakaiqesv feqlrvvrdg qlrivfspdl
      481 kicswefcar rheeliprrl lipqvsqlga aaqkyqaatq nastnlsapd lqnncnlfva
      541 sarqlakale vplvndlgyt kryvrclqis evvnsmkdli dysretrtgp meslakfprr
      601 tstssgfhaq sqqpeeqhqq qqqtpqqqmm tqssngdqss aqasgmqlaa nngvanvnns
      661 lnvasastsa gtiagplhqn smnsrqqnsm nnasssyggn svqipspgss stipqtqanp
      721 spfqsptpss snnppqaphg alaasshmss anspamnmpm qqpalssead pnesqssvqk
      781 iiheimssql nntggmvgag tlgndvksvn gmlppsnnmv lsggntlvan gtisnnsvig
      841 gvgfgsmsgg lgqsamvngi ratmgnnpvm ngrmgmaqma rdqlrnhqqq dmgnqllngl
      901 gavngfnnyq fdwkpsp
//
LOCUS       XP_016693742             917 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor SEUSS [Gossypium hirsutum].
ACCESSION   XP_016693742
VERSION     XP_016693742.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838253.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693742.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..917
                     /product="transcriptional corepressor SEUSS"
                     /calculated_mol_wt=99581
     Region          340..594
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          <703..>803
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..917
                     /gene="LOC107910419"
                     /coded_by="XM_016838253.2:473..3226"
                     /db_xref="GeneID:107910419"
ORIGIN      
        1 mvplgsstpi ggaqsvpssl lrtnsgmlgs qggglpsqsg fpslvsprtq fnnmnmlgnv
       61 pnvssllnqs fgnggpnpql sgpgsgqrgg idsgaesdpl snvgtgmgfn asssfvpsnm
      121 anpgssgqvq sqqysnlfgn hilpdqqqpq qpesqqfqhg qqgmqqvsap hntqqgqqqq
      181 qqqqqfqsir ggmagvgavk lepqltndqh sqpqqlqtlr dlapvklepq qippsrtlaq
      241 vkmepqhsdq sflhqqqqqq qqqqqqllqm srqppqtaaa qisllhqqrl lqlqqqhhhq
      301 qllkampqqr pqlpqqfqqq nlplrspvks ayepgmcarr lthymyqqqh rpednniefw
      361 rkfvaeyfap nakkkwcvsm ygngrqttgv fpqdvwhcei cnrkpgrgfe atvevlprlf
      421 kikyesgtle ellyvdmpre yqnssgqivl dyakaiqesv feqlrvvrdg qlrivfspdl
      481 kicswefcar rheeliprrl lipqvsqlga aaqkyqaatq nastnlsapd lqnncnlfva
      541 sarqlakale vplvndlgyt kryvrclqis evvnsmkdli dysretrtgp meslakfprr
      601 tstssgfhaq sqqpeeqhqq qqqtpqqqmm tqssngdqss aqasgmqlaa nngvanvnns
      661 lnvasastsa gtiagplhqn smnsrqqnsm nnasssyggn svqipspgss stipqtqanp
      721 spfqsptpss snnppqaphg alaasshmss anspamnmpm qqpalssead pnesqssvqk
      781 iiheimssql nntggmvgag tlgndvksvn gmlppsnnmv lsggntlvan gtisnnsvig
      841 gvgfgsmsgg lgqsamvngi ratmgnnpvm ngrmgmaqma rdqlrnhqqq dmgnqllngl
      901 gavngfnnyq fdwkpsp
//
LOCUS       XP_016693744             177 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin M-type, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693744
VERSION     XP_016693744.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838255.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693744.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..177
                     /product="thioredoxin M-type, chloroplastic"
                     /calculated_mol_wt=19396
     Region          72..175
                     /region_name="CnoX"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; COG3118"
                     /db_xref="CDD:442352"
     CDS             1..177
                     /gene="LOC107910420"
                     /coded_by="XM_016838255.2:272..805"
                     /db_xref="GeneID:107910420"
ORIGIN      
        1 malkncfqlt svcntrasvl qsyhhhhvss vdkihfqtfk glklnkpnls ftagrcqksr
       61 lickaseava qvevvteadw eelvvgsktp vlvdfwapwc gpcrviepvi aelakeyagk
      121 ivcyklntdd spniatkfgi rsiptvlffk ngekkesiig avpkatlaat idkyvdg
//
LOCUS       XP_016693737             513 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase kinase 3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693737
VERSION     XP_016693737.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838248.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693737.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..513
                     /product="mitogen-activated protein kinase kinase kinase 3
                     isoform X1"
                     /calculated_mol_wt=56716
     Region          200..451
                     /region_name="STKc_MEKK1_plant"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Plant Mitogen-Activated Protein (MAP)/Extracellular
                     signal-Regulated Kinase (ERK) Kinase Kinase 1; cd06632"
                     /db_xref="CDD:270802"
     Site            order(201..205,209,222,224,258,274..277,280..281,284,320,
                     322..325,327,337..338,341,354..357,359,387,396)
                     /site_type="active"
                     /db_xref="CDD:270802"
     Site            order(201..205,209,222,224,258,274..277,279..281,284,
                     324..325,327,337..339)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270802"
     Site            order(204..205,320,322..324,341,354..357,359,387,396)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270802"
     Site            order(337..348,351..359)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270802"
     CDS             1..513
                     /gene="LOC107910418"
                     /coded_by="XM_016838248.2:95..1636"
                     /db_xref="GeneID:107910418"
ORIGIN      
        1 meeksmkkty ttrnndkhsm ekpnglheaa avskksprns ydievhpisf hgcsvlwdsd
       61 sdlgsksrek kayplpqpsa sscrasmesh qrgssfgser vsvssftsne ssssddddih
      121 gdfssfrvye ennsnlwskg snsgskasym hqsprylspw datlesptek hpchrlplpp
      181 ptspnkppkk spskwkkgkl lgrgtfghvf agfnsengtm cavkevkvik ddqtskeclk
      241 qlnqeislls elshpnivqy ygsemgsdkl svyleyasgg svhkllgeyg pfkepvirsy
      301 trqilsglay lharntvhrd ikganilvdp ngeikladfg makhmtscss mlsfkgspyw
      361 mapevimnah gyslavdiws lgctvlemat skppwsqyeg vaaifkians kgfpdipnnl
      421 skdaqnfikl clqreptarp talkllqhpf vqdqsmvept kfnlvddrrr pskgswdeis
      481 lasslpespc snstqqcksa cgsshrssyq tsy
//
LOCUS       XP_016693738             524 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase kinase 3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693738
VERSION     XP_016693738.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693738.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..524
                     /product="mitogen-activated protein kinase kinase kinase 3
                     isoform X2"
                     /calculated_mol_wt=58170
     Region          232..462
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(233..236,239,241,254,256,285..288,331,335..336,338,
                     348..349)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..524
                     /gene="LOC107910418"
                     /coded_by="XM_016838249.2:2..1576"
                     /db_xref="GeneID:107910418"
ORIGIN      
        1 mlsvnhyinq cvhkeqlqpk tylvlshtvl yymeeksmkk tyttrnndkh smekpnglhe
       61 aaavskkspr nsydievhpi sfhgcsvlwd sdsdlgsksr ekkayplpqp sasscrasme
      121 shqrgssfgs ervsvssfts nessssdddd ihgdfssfrv yeennsnlws kgsnsgskas
      181 ymhqspryls pwdatlespt ekhpchrlpl ppptspnkpp kkspskwkkg kllgrgtfgh
      241 vfagfnseng tmcavkevkv ikddqtskec lkqlnqgsdk lsvyleyasg gsvhkllgey
      301 gpfkepvirs ytrqilsgla ylharntvhr dikganilvd pngeikladf gmakhmtscs
      361 smlsfkgspy wmapevimna hgyslavdiw slgctvlema tskppwsqye gvaaifkian
      421 skgfpdipnn lskdaqnfik lclqreptar ptalkllqhp fvqdqsmvep tkfnlvddrr
      481 rpskgswdei slasslpesp csnstqqcks acgsshrssy qtsy
//
LOCUS       XP_016693736             368 aa            linear   PLN 06-AUG-2024
DEFINITION  ribosome maturation protein SBDS [Gossypium hirsutum].
ACCESSION   XP_016693736
VERSION     XP_016693736.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693736.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..368
                     /product="ribosome maturation protein SBDS"
                     /calculated_mol_wt=41429
     Region          4..351
                     /region_name="PTZ00448"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:185627"
     CDS             1..368
                     /gene="LOC107910417"
                     /coded_by="XM_016838247.2:33..1139"
                     /db_xref="GeneID:107910417"
ORIGIN      
        1 msktlvqpig qkrltnvavv rlkkhgmrfe iacyknkvls wrsrvekdld evlqshtvys
       61 nvskgvlakt kdlvaafgtd dqtkicleil ekgelqvagk eresqfssqf rdiativmqk
      121 tinpetqrpy tismierlmh eihfavdpns sskkqalevi rqlqnnfpik rspmrlrliv
      181 pgqnfhslce klnewgativ skdesgtqls viceiepglf recdslvrnl qgrleilsvs
      241 vhaegdtqvd nyddedissq lpkdsaesas srlppessds vvqlsekiqk htissgngna
      301 egeakqhkcs tcnafvgdsk qyrdhfksew hkhnlkrktr qlppltaeec ladvelsdsk
      361 sdlqdysf
//
LOCUS       XP_040944362             571 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944362
VERSION     XP_040944362.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088428.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..571
                     /product="scarecrow-like protein 1 isoform X1"
                     /calculated_mol_wt=63405
     Region          202..570
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..571
                     /gene="LOC107910415"
                     /coded_by="XM_041088428.1:664..2379"
                     /db_xref="GeneID:107910415"
ORIGIN      
        1 mhqqpfynst vqrvgtmslv rsaepatasc rntnlysiqd ssdstgmair mfgsdkhkpv
       61 yvmdsysses yekyfldspt delihssssg isgssvrlqd vsscqirdyl eiqspdtlds
      121 dldkmklklk eleralladn dvdgdddmfg tglsmevdge wsdpirmgsh hdspkessss
      181 gtyldsvsgn kevshvssqt pkqmliecaa ilseghieka saiinelrqk vsiqgdppqr
      241 iaaymvegla armaasgkcl ykalrckepp ssdrlaamqi lfevcpcfkf gfmaangaii
      301 eafkgekrvh iidfdisqgs qyitliqtia klpgkpphlr ltgvddpdsv qrlnggleiv
      361 glrleklaei lgvpfefrav psrtslvaps mldckpgeal ivnfafllhh mpdesvstin
      421 qrdqllrmvk smnpklvtvv eqdvntntsp ffprfieays yysavfdsld atlpresqdr
      481 mnverqclar divniiaceg eerieryeva gkwrarmima gfkscpmssn vidtiqklik
      541 eycdryklke dvgalhfgwe dkslivasaw s
//
LOCUS       XP_016693733             571 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693733
VERSION     XP_016693733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..571
                     /product="scarecrow-like protein 1 isoform X1"
                     /calculated_mol_wt=63405
     Region          202..570
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..571
                     /gene="LOC107910415"
                     /coded_by="XM_016838244.2:239..1954"
                     /db_xref="GeneID:107910415"
ORIGIN      
        1 mhqqpfynst vqrvgtmslv rsaepatasc rntnlysiqd ssdstgmair mfgsdkhkpv
       61 yvmdsysses yekyfldspt delihssssg isgssvrlqd vsscqirdyl eiqspdtlds
      121 dldkmklklk eleralladn dvdgdddmfg tglsmevdge wsdpirmgsh hdspkessss
      181 gtyldsvsgn kevshvssqt pkqmliecaa ilseghieka saiinelrqk vsiqgdppqr
      241 iaaymvegla armaasgkcl ykalrckepp ssdrlaamqi lfevcpcfkf gfmaangaii
      301 eafkgekrvh iidfdisqgs qyitliqtia klpgkpphlr ltgvddpdsv qrlnggleiv
      361 glrleklaei lgvpfefrav psrtslvaps mldckpgeal ivnfafllhh mpdesvstin
      421 qrdqllrmvk smnpklvtvv eqdvntntsp ffprfieays yysavfdsld atlpresqdr
      481 mnverqclar divniiaceg eerieryeva gkwrarmima gfkscpmssn vidtiqklik
      541 eycdryklke dvgalhfgwe dkslivasaw s
//
LOCUS       XP_016693734             555 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693734
VERSION     XP_016693734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838245.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..555
                     /product="scarecrow-like protein 1 isoform X2"
                     /calculated_mol_wt=61530
     Region          186..554
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..555
                     /gene="LOC107910415"
                     /coded_by="XM_016838245.2:225..1892"
                     /db_xref="GeneID:107910415"
ORIGIN      
        1 mslvrsaepa tascrntnly siqdssdstg mairmfgsdk hkpvyvmdsy ssesyekyfl
       61 dsptdelihs sssgisgssv rlqdvsscqi rdyleiqspd tldsdldkmk lklkeleral
      121 ladndvdgdd dmfgtglsme vdgewsdpir mgshhdspke ssssgtylds vsgnkevshv
      181 ssqtpkqmli ecaailsegh iekasaiine lrqkvsiqgd ppqriaaymv eglaarmaas
      241 gkclykalrc keppssdrla amqilfevcp cfkfgfmaan gaiieafkge krvhiidfdi
      301 sqgsqyitli qtiaklpgkp phlrltgvdd pdsvqrlngg leivglrlek laeilgvpfe
      361 fravpsrtsl vapsmldckp gealivnfaf llhhmpdesv stinqrdqll rmvksmnpkl
      421 vtvveqdvnt ntspffprfi eaysyysavf dsldatlpre sqdrmnverq clardivnii
      481 acegeerier yevagkwrar mimagfkscp mssnvidtiq klikeycdry klkedvgalh
      541 fgwedksliv asaws
//
LOCUS       XP_040944363             538 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944363
VERSION     XP_040944363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088429.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..538
                     /product="scarecrow-like protein 1 isoform X3"
                     /calculated_mol_wt=59930
     Region          180..537
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..538
                     /gene="LOC107910415"
                     /coded_by="XM_041088429.1:664..2280"
                     /db_xref="GeneID:107910415"
ORIGIN      
        1 mhqqpfynst vqrvgtmslv rsaepatasc rntnlysiqd ssdstgmair mfgsdkhkpv
       61 yvmdsysses yekyfldspt delihssssg isgssvrlqd vsscqirdyl eiqspdtlds
      121 dldkmklklk eleralladn dvdgdddmfg tglsmevdge wsdpirmgsh hdspkessss
      181 eghiekasai inelrqkvsi qgdppqriaa ymveglaarm aasgkclyka lrckeppssd
      241 rlaamqilfe vcpcfkfgfm aangaiieaf kgekrvhiid fdisqgsqyi tliqtiaklp
      301 gkpphlrltg vddpdsvqrl nggleivglr leklaeilgv pfefravpsr tslvapsmld
      361 ckpgealivn fafllhhmpd esvstinqrd qllrmvksmn pklvtvveqd vntntspffp
      421 rfieaysyys avfdsldatl presqdrmnv erqclardiv niiacegeer ieryevagkw
      481 rarmimagfk scpmssnvid tiqklikeyc dryklkedvg alhfgwedks livasaws
//
LOCUS       XP_040944364             522 aa            linear   PLN 06-AUG-2024
DEFINITION  scarecrow-like protein 1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944364
VERSION     XP_040944364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088430.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..522
                     /product="scarecrow-like protein 1 isoform X4"
                     /calculated_mol_wt=58054
     Region          164..521
                     /region_name="GRAS"
                     /note="GRAS domain family; pfam03514"
                     /db_xref="CDD:397536"
     CDS             1..522
                     /gene="LOC107910415"
                     /coded_by="XM_041088430.1:225..1793"
                     /db_xref="GeneID:107910415"
ORIGIN      
        1 mslvrsaepa tascrntnly siqdssdstg mairmfgsdk hkpvyvmdsy ssesyekyfl
       61 dsptdelihs sssgisgssv rlqdvsscqi rdyleiqspd tldsdldkmk lklkeleral
      121 ladndvdgdd dmfgtglsme vdgewsdpir mgshhdspke sssseghiek asaiinelrq
      181 kvsiqgdppq riaaymvegl aarmaasgkc lykalrckep pssdrlaamq ilfevcpcfk
      241 fgfmaangai ieafkgekrv hiidfdisqg sqyitliqti aklpgkpphl rltgvddpds
      301 vqrlngglei vglrleklae ilgvpfefra vpsrtslvap smldckpgea livnfafllh
      361 hmpdesvsti nqrdqllrmv ksmnpklvtv veqdvntnts pffprfieay syysavfdsl
      421 datlpresqd rmnverqcla rdivniiace geerieryev agkwrarmim agfkscpmss
      481 nvidtiqkli keycdryklk edvgalhfgw edkslivasa ws
//
LOCUS       XP_016693735             564 aa            linear   PLN 06-AUG-2024
DEFINITION  small RNA degrading nuclease 5 [Gossypium hirsutum].
ACCESSION   XP_016693735
VERSION     XP_016693735.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838246.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693735.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..564
                     /product="small RNA degrading nuclease 5"
                     /calculated_mol_wt=62870
     Region          210..359
                     /region_name="REX1_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     1, -3 and similar eukaryotic proteins; cd06145"
                     /db_xref="CDD:99848"
     Site            order(213..216,218,291..292,294..296,345,350)
                     /site_type="active"
                     /db_xref="CDD:99848"
     Site            order(213..216,218,291..292,294..295,345,350)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99848"
     Site            order(213,215,296,345,350)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99848"
     CDS             1..564
                     /gene="LOC107910416"
                     /coded_by="XM_016838246.2:154..1848"
                     /db_xref="GeneID:107910416"
ORIGIN      
        1 maslkeksee aipeeekkes snyfdiygpq akaelvfktp eadstlnlqd vqglvtwvla
       61 dgfmpswvfi knkplipkvv mlyvpgldaa lyiaqsmkls gfkqscgnpr allalscvsd
      121 gmqtidallt ckvkrkrnvi dsardvsqsa eqetsissmd saeilkdipf pisyymltak
      181 eledngfcyd qpgflptrpa pdgsspyeml aldcemcits egfeltrvtl vdikgqvvld
      241 klvnpsnpit dyntrfsgit yemlsgvttt lqnvqedflm lvhkdtilvg hslendllal
      301 kishdliidt svlykhprgg syksalrvla krflsreiqq sgsghdsied araamdlall
      361 kirngpdfgs ppsfmrrkll tllgecgkts sfiddisivk ryasesshai pvcsddeall
      421 karkevkndr vhfvwtqfse lnsyfrkqae ddvklngkla emmslltcdk kpakrkgvky
      481 nistelkeil tridarvrsl htalptnsmf iictghgdia ivhrlrkmlt eqsetmipre
      541 klikvleelq aqaevalcfv gmkh
//
LOCUS       XP_016693732             406 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein EIX2 [Gossypium hirsutum].
ACCESSION   XP_016693732
VERSION     XP_016693732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="receptor-like protein EIX2"
                     /calculated_mol_wt=44592
     Region          <2..>295
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          3..23
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          24..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          48..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          120..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..406
                     /gene="LOC107910414"
                     /coded_by="XM_016838243.2:195..1415"
                     /db_xref="GeneID:107910414"
ORIGIN      
        1 mlldlsnnnl fgtiptsfgn csplvylnlg snnltdgipe elqgakrlrf lnvsgnhfdg
       61 pfpsvvrrle rtsvidmgnn kfsgkipefi gdlkdlrill lefnsfngsi peeinalenm
      121 qfiglsnnql sgpipeklsg lktiinrpkd gnllgfiisq lyigvqvnlv akglsmqfdv
      181 vrtynngldl scnnltgnlp selghlqgly alnlshnrls gniptaignm sllesldlsy
      241 nnlsgeipvs lalldplstl nlahnnlsge iptsphfdtl srdglayign kflcgapdgi
      301 hcdsedfptp essesehsee qcgewkmvla lafagyvvgf wglfgvvylv nekwrkaywa
      361 svdrivdgii rcrkirvssv kpmlgrwqql qlgirwlkle ilsskg
//
LOCUS       XP_016693729             340 aa            linear   PLN 06-AUG-2024
DEFINITION  carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016693729
VERSION     XP_016693729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838240.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="carboxyvinyl-carboxyphosphonate
                     phosphorylmutase, chloroplastic"
                     /calculated_mol_wt=36696
     Region          45..333
                     /region_name="PrpB"
                     /note="2-Methylisocitrate lyase and related enzymes, PEP
                     mutase family [Carbohydrate transport and metabolism];
                     COG2513"
                     /db_xref="CDD:442003"
     CDS             1..340
                     /gene="LOC107910412"
                     /coded_by="XM_016838240.2:111..1133"
                     /db_xref="GeneID:107910412"
ORIGIN      
        1 mstmttimlm ppkatslqhf nfkpstlrsr ssptkssypt vrmqtrfhrl iedqgivlmp
       61 gcydalsaai vqqsgftagf isgyalsasl lgkpdfgllt ptemaatart vcaaapmipi
      121 iadadtgggn alnvqrtvrd liaagaagcf ledqawpkkc ghmcgkqvip aeehaakias
      181 ardaigdsdf flvartdaga tsaktglsda iaranlymea gadacfveap rnddelkeig
      241 rhtkgyrvcn mieggvtplh tpeelramgf hlivhpltal yasaralvdv lrtlkengtt
      301 rdhlhkmatf eefnqlvkld swfelearys nqkspmrvks
//
LOCUS       XP_016693731             126 aa            linear   PLN 06-AUG-2024
DEFINITION  basic blue protein [Gossypium hirsutum].
ACCESSION   XP_016693731
VERSION     XP_016693731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838242.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..126
                     /product="basic blue protein"
                     /calculated_mol_wt=13605
     Region          31..125
                     /region_name="Plantacyanin"
                     /note="Plantacyanin is a subclass of phytocyanins, plant
                     type I copper proteins; cd11013"
                     /db_xref="CDD:259899"
     CDS             1..126
                     /gene="LOC107910413"
                     /coded_by="XM_016838242.2:258..638"
                     /db_xref="GeneID:107910413"
ORIGIN      
        1 maqgsgsasq akfwvallfc flvfwenvda atytvggsng wtfnmatwpr gkrfragdtl
       61 ffkydatihn vvavnrggyr scitpagakv yksgkdevkl gkgmnyficn iaghcesgmk
      121 iainav
//
LOCUS       XP_016693728             331 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693728
VERSION     XP_016693728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838239.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..331
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37718
     CDS             1..331
                     /gene="LOC107910411"
                     /coded_by="XM_016838239.2:384..1379"
                     /db_xref="GeneID:107910411"
ORIGIN      
        1 mdreqeemqf lgffgiykes ykviiacrki fskitlslil plsfiylvhm evssllfrki
       61 ihtkveldea qspakaqklh dlisnemayf wlfkaayftl flifsllsts avvytiaciy
      121 tareltfgkv msvvpkvwkr lmvtflctfl tmfvyhvmai fimvssvill lgsdavdavl
      181 avllvlyfvg flymtiiwhl asvisvleec ygfqamlkgk nlikgklwva iiiflkliis
      241 lviiqaafqs lvvhgsslgi amrvvyaiic flllsklilf vlviqtviyf vcksyhheni
      301 dksalsdhle vylgeyvplk akdvqleqfq v
//
LOCUS       XP_016693727             212 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABC1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693727
VERSION     XP_016693727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..212
                     /product="ras-related protein RABC1 isoform X1"
                     /calculated_mol_wt=23456
     Region          1..211
                     /region_name="PLN03118"
                     /note="Rab family protein; Provisional"
                     /db_xref="CDD:215587"
     CDS             1..212
                     /gene="LOC107910409"
                     /coded_by="XM_016838238.2:275..913"
                     /db_xref="GeneID:107910409"
ORIGIN      
        1 measstsqpe fdylfkllli gdsgvgkstl llsftsdtfe elnptigvdf kvkhvtiggk
       61 klklaiwdta gqerfrtlts syyrgaqgii mvydvtrrdt ftdlsdvwak eidlystnqd
      121 cikmlvgnkv dkeservvsk kegidfarey gclfiecsak trvnveqcfe elvlkiletp
      181 slvaegssgv kknifkqnpp qsgaatsgcc sw
//
LOCUS       XP_040944365             201 aa            linear   PLN 06-AUG-2024
DEFINITION  ras-related protein RABC1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944365
VERSION     XP_040944365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088431.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..201
                     /product="ras-related protein RABC1 isoform X2"
                     /calculated_mol_wt=22101
     Region          1..200
                     /region_name="PLN03118"
                     /note="Rab family protein; Provisional"
                     /db_xref="CDD:215587"
     CDS             1..201
                     /gene="LOC107910409"
                     /coded_by="XM_041088431.1:239..844"
                     /db_xref="GeneID:107910409"
ORIGIN      
        1 measstsqpe fdylfkllli gdsgvgkstl llsftsdtfe elnptigvdf kvkhvtiggk
       61 klklaiwdta gqerfrtlts syyrgaqgii mdlsdvwake idlystnqdc ikmlvgnkvd
      121 keservvskk egidfareyg clfiecsakt rvnveqcfee lvlkiletps lvaegssgvk
      181 knifkqnppq sgaatsgccs w
//
LOCUS       XP_016693726             276 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 11 [Gossypium hirsutum].
ACCESSION   XP_016693726
VERSION     XP_016693726.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693726.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="probable protein phosphatase 2C 11"
                     /calculated_mol_wt=29823
     Region          27..273
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(38,42..43,64..66,225,264)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..276
                     /gene="LOC107910408"
                     /coded_by="XM_016838237.2:375..1205"
                     /db_xref="GeneID:107910408"
ORIGIN      
        1 missrdphal fsgggisflt gsraakfsyg yssfkgkrps medfyetris evdgqmvaff
       61 gvfdghggsr taeylknnlf knlsthpdfi kdtktaivet fkqtdadyln eekgqqkdag
      121 stastavllg drllvanvgd srvvasrags avplsidhkp drsderlrie daggfiiwag
      181 twrvggilav srafgdkllk pyvvaepeiq eeeidgvdfi iiasdglwnv lsnedavalv
      241 qhitdaeaaa rklikeayal gssdnitcvv vrfdss
//
LOCUS       XP_016693723             788 aa            linear   PLN 06-AUG-2024
DEFINITION  putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693723
VERSION     XP_016693723.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838234.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..788
                     /product="putative DEAD-box ATP-dependent RNA helicase 29
                     isoform X1"
                     /calculated_mol_wt=88847
     Region          28..233
                     /region_name="DEADc_DDX54"
                     /note="DEAD-box helicase domain of DEAD box protein 54;
                     cd17959"
                     /db_xref="CDD:350717"
     Site            order(47..48,50..52,55,73..80)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350717"
     Region          254..375
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(334,336,361,364..365)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     Region          629..691
                     /region_name="DBP10CT"
                     /note="DBP10CT (NUC160) domain; pfam08147"
                     /db_xref="CDD:462373"
     CDS             1..788
                     /gene="LOC107910406"
                     /coded_by="XM_016838234.2:155..2521"
                     /db_xref="GeneID:107910406"
ORIGIN      
        1 mapvderfvs skaelkrkqk ekkkaksggf eslnlspnvy rgikrkgyrv ptpiqrktmp
       61 lilagndvva martgsgkta aflvpmlekl kqhvpqggvr alilsptrdl alqtlkfake
      121 lgkftdlris llvggdsmes qfeelaqnpd iiiatpgrlm hhlaevddmt lrtveyvvfd
      181 eadslfgmgf aeqlhkiltq lsenrqtllf satlpsalae fakaglrdpq lvrldletki
      241 spdlklvfft lrqeekhaal lylardhiss dqqtlifvst khhveflnim freegiepsv
      301 cygdmdqdar kiniskfrsr ktmllivtdv aargidipll dnvinwdfpp kpkifvhrvg
      361 raaragrtgt afsfvtsedm pylldlhlfl srpiraapte eevfqdmdga mnkidqaian
      421 gesvygrfpq niidlisdrv rdmidssael ntlqrtctna frlysktkpl paresikrak
      481 dlpreglhpi frnvleggel aalafserlk afrpkqtile aeseaakskh sqwvdvmkkk
      541 rdmhekiinl vhkqrfsnhv eketepdits skindtkvea rgskrkarsf kdeeyyissv
      601 ptnhhteagl svrsnegfgs nrlesavldl vaddseglqk qksryhwdkr gkkyvklnng
      661 ervtasgkvk tesgakikte ktgiykkwke rshkkvylkg ttngengeat tissgdyrsr
      721 gngrnfrgnk ksqhsvpnah vrseikdfdq vrkerqkkan nklsymkgka nkkkgknfgk
      781 sgkrgksk
//
LOCUS       XP_016693724             787 aa            linear   PLN 06-AUG-2024
DEFINITION  putative DEAD-box ATP-dependent RNA helicase 29 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693724
VERSION     XP_016693724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838235.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..787
                     /product="putative DEAD-box ATP-dependent RNA helicase 29
                     isoform X2"
                     /calculated_mol_wt=88748
     Region          28..233
                     /region_name="DEADc_DDX54"
                     /note="DEAD-box helicase domain of DEAD box protein 54;
                     cd17959"
                     /db_xref="CDD:350717"
     Site            order(47..48,50..52,55,73..80)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350717"
     Region          254..375
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(334,336,361,364..365)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     Region          628..690
                     /region_name="DBP10CT"
                     /note="DBP10CT (NUC160) domain; pfam08147"
                     /db_xref="CDD:462373"
     CDS             1..787
                     /gene="LOC107910406"
                     /coded_by="XM_016838235.2:155..2518"
                     /db_xref="GeneID:107910406"
ORIGIN      
        1 mapvderfvs skaelkrkqk ekkkaksggf eslnlspnvy rgikrkgyrv ptpiqrktmp
       61 lilagndvva martgsgkta aflvpmlekl kqhvpqggvr alilsptrdl alqtlkfake
      121 lgkftdlris llvggdsmes qfeelaqnpd iiiatpgrlm hhlaevddmt lrtveyvvfd
      181 eadslfgmgf aeqlhkiltq lsenrqtllf satlpsalae fakaglrdpq lvrldletki
      241 spdlklvfft lrqeekhaal lylardhiss dqqtlifvst khhveflnim freegiepsv
      301 cygdmdqdar kiniskfrsr ktmllivtdv aargidipll dnvinwdfpp kpkifvhrvg
      361 raaragrtgt afsfvtsedm pylldlhlfl srpiraapte eevfqdmdga mnkidqaian
      421 gesvygrfpq niidlisdrv rdmidssael ntlqrtctna frlysktkpl paresikrak
      481 dlpreglhpi frnvleggel aalafserlk afrpkqtile aeseaakskh sqwvdvmkkk
      541 rdmhekiinl vhkqrfsnhv eketepdits skindtkear gskrkarsfk deeyyissvp
      601 tnhhteagls vrsnegfgsn rlesavldlv addseglqkq ksryhwdkrg kkyvklnnge
      661 rvtasgkvkt esgakiktek tgiykkwker shkkvylkgt tngengeatt issgdyrsrg
      721 ngrnfrgnkk sqhsvpnahv rseikdfdqv rkerqkkann klsymkgkan kkkgknfgks
      781 gkrgksk
//
LOCUS       XP_016693725             372 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKP2A [Gossypium hirsutum].
ACCESSION   XP_016693725
VERSION     XP_016693725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..372
                     /product="F-box protein SKP2A"
                     /calculated_mol_wt=40734
     Region          39..86
                     /region_name="F-box_AtSKP2-like"
                     /note="F-box domain found in Arabidopsis thaliana
                     SKP2-like proteins (AtSKP2A and AtSKP2B) and similar
                     proteins; cd22161"
                     /db_xref="CDD:438932"
     Site            order(43,47,50..51,54..55,59,61..62,66..68,70)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438932"
     Region          78..103
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          101..276
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          104..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          131..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          157..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          183..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          210..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          236..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          262..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          306..337
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..372
                     /gene="LOC107910407"
                     /coded_by="XM_016838236.2:236..1354"
                     /db_xref="GeneID:107910407"
ORIGIN      
        1 migeakvgne dlnlcfeklm mvaagnsegv kmngvgitew kdipvelllr ivsllddqta
       61 ivassvcsgw rdavclgltq lclswcrknm nnlvlslapk ftrlqtlilr qenpqledna
      121 vetiskfchd lqdldlsksf klsdrslyal ahgcpnlkkl nisgctsfsd ealayltnfc
      181 rklkilnlcg cvkaatdhal qaigrncnml qslnlgwcdn vgdlgvmsla ygchdlrcld
      241 lcgcvritdd svialanecl hlrslglyyc rnitdramys lahsrvknkg ltwessmkgr
      301 yeddglksln isqctaltps avqalcdtfp alhtcsgrhs lvmsgclnlt svhcacavqa
      361 hrtfntifht ah
//
LOCUS       XP_016693718             449 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693718
VERSION     XP_016693718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838229.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="ACT domain-containing protein ACR3 isoform X1"
                     /calculated_mol_wt=50160
     Region          35..106
                     /region_name="ACT_ACR_1"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04895"
                     /db_xref="CDD:153167"
     Region          129..202
                     /region_name="ACT_ACR_2"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04925"
                     /db_xref="CDD:153197"
     Region          264..338
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          342..413
                     /region_name="ACT_ACR_4"
                     /note="C-terminal ACT domain, of a novel type of ACT
                     domain-containing protein which is composed almost
                     entirely of four ACT domain repeats (the 'ACR' protein);
                     cd04926"
                     /db_xref="CDD:153198"
     CDS             1..449
                     /gene="LOC107910404"
                     /coded_by="XM_016838229.2:651..2000"
                     /db_xref="GeneID:107910404"
ORIGIN      
        1 makvcwpyfd peyenlsvri npprvsvdnt scsdctlikv dsvnkpgill evvqilsdld
       61 fiitkayvss dggwfmdvfh vtdqqgkkit dgktidyier vlgpkghttd gmkdcpgkrv
      121 gvhsfgnhta ieligrdrpg llseisavla nlhfnvtvae vwthnrriac vlyvndntts
      181 gsvddpnrls imeeqlkhim rgcedddnva rtsfsmgfth idrrlhqmlf adrdyegggv
      241 ttevdyppsf kpkitverce ekgysvvtvr ckdraklmfd ivctltdmqy vvfhanissn
      301 gpyasqeyfi rhmdgctldt egekervvkc leaaihrrvs eglslelcak drvgllsevt
      361 rilrenglsv rragvstvge kavnvfyvrd aygnpvdakt iealrkeigq tmmlnvkkdp
      421 sstkareaet sgwaktsfff gnllekfla
//
LOCUS       XP_016693719             449 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693719
VERSION     XP_016693719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="ACT domain-containing protein ACR3 isoform X1"
                     /calculated_mol_wt=50160
     Region          35..106
                     /region_name="ACT_ACR_1"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04895"
                     /db_xref="CDD:153167"
     Region          129..202
                     /region_name="ACT_ACR_2"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04925"
                     /db_xref="CDD:153197"
     Region          264..338
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          342..413
                     /region_name="ACT_ACR_4"
                     /note="C-terminal ACT domain, of a novel type of ACT
                     domain-containing protein which is composed almost
                     entirely of four ACT domain repeats (the 'ACR' protein);
                     cd04926"
                     /db_xref="CDD:153198"
     CDS             1..449
                     /gene="LOC107910404"
                     /coded_by="XM_016838230.2:702..2051"
                     /db_xref="GeneID:107910404"
ORIGIN      
        1 makvcwpyfd peyenlsvri npprvsvdnt scsdctlikv dsvnkpgill evvqilsdld
       61 fiitkayvss dggwfmdvfh vtdqqgkkit dgktidyier vlgpkghttd gmkdcpgkrv
      121 gvhsfgnhta ieligrdrpg llseisavla nlhfnvtvae vwthnrriac vlyvndntts
      181 gsvddpnrls imeeqlkhim rgcedddnva rtsfsmgfth idrrlhqmlf adrdyegggv
      241 ttevdyppsf kpkitverce ekgysvvtvr ckdraklmfd ivctltdmqy vvfhanissn
      301 gpyasqeyfi rhmdgctldt egekervvkc leaaihrrvs eglslelcak drvgllsevt
      361 rilrenglsv rragvstvge kavnvfyvrd aygnpvdakt iealrkeigq tmmlnvkkdp
      421 sstkareaet sgwaktsfff gnllekfla
//
LOCUS       XP_016693720             449 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693720
VERSION     XP_016693720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838231.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="ACT domain-containing protein ACR3 isoform X1"
                     /calculated_mol_wt=50160
     Region          35..106
                     /region_name="ACT_ACR_1"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04895"
                     /db_xref="CDD:153167"
     Region          129..202
                     /region_name="ACT_ACR_2"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04925"
                     /db_xref="CDD:153197"
     Region          264..338
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          342..413
                     /region_name="ACT_ACR_4"
                     /note="C-terminal ACT domain, of a novel type of ACT
                     domain-containing protein which is composed almost
                     entirely of four ACT domain repeats (the 'ACR' protein);
                     cd04926"
                     /db_xref="CDD:153198"
     CDS             1..449
                     /gene="LOC107910404"
                     /coded_by="XM_016838231.2:558..1907"
                     /db_xref="GeneID:107910404"
ORIGIN      
        1 makvcwpyfd peyenlsvri npprvsvdnt scsdctlikv dsvnkpgill evvqilsdld
       61 fiitkayvss dggwfmdvfh vtdqqgkkit dgktidyier vlgpkghttd gmkdcpgkrv
      121 gvhsfgnhta ieligrdrpg llseisavla nlhfnvtvae vwthnrriac vlyvndntts
      181 gsvddpnrls imeeqlkhim rgcedddnva rtsfsmgfth idrrlhqmlf adrdyegggv
      241 ttevdyppsf kpkitverce ekgysvvtvr ckdraklmfd ivctltdmqy vvfhanissn
      301 gpyasqeyfi rhmdgctldt egekervvkc leaaihrrvs eglslelcak drvgllsevt
      361 rilrenglsv rragvstvge kavnvfyvrd aygnpvdakt iealrkeigq tmmlnvkkdp
      421 sstkareaet sgwaktsfff gnllekfla
//
LOCUS       XP_016693721             449 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693721
VERSION     XP_016693721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="ACT domain-containing protein ACR3 isoform X1"
                     /calculated_mol_wt=50160
     Region          35..106
                     /region_name="ACT_ACR_1"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04895"
                     /db_xref="CDD:153167"
     Region          129..202
                     /region_name="ACT_ACR_2"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04925"
                     /db_xref="CDD:153197"
     Region          264..338
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          342..413
                     /region_name="ACT_ACR_4"
                     /note="C-terminal ACT domain, of a novel type of ACT
                     domain-containing protein which is composed almost
                     entirely of four ACT domain repeats (the 'ACR' protein);
                     cd04926"
                     /db_xref="CDD:153198"
     CDS             1..449
                     /gene="LOC107910404"
                     /coded_by="XM_016838232.2:600..1949"
                     /db_xref="GeneID:107910404"
ORIGIN      
        1 makvcwpyfd peyenlsvri npprvsvdnt scsdctlikv dsvnkpgill evvqilsdld
       61 fiitkayvss dggwfmdvfh vtdqqgkkit dgktidyier vlgpkghttd gmkdcpgkrv
      121 gvhsfgnhta ieligrdrpg llseisavla nlhfnvtvae vwthnrriac vlyvndntts
      181 gsvddpnrls imeeqlkhim rgcedddnva rtsfsmgfth idrrlhqmlf adrdyegggv
      241 ttevdyppsf kpkitverce ekgysvvtvr ckdraklmfd ivctltdmqy vvfhanissn
      301 gpyasqeyfi rhmdgctldt egekervvkc leaaihrrvs eglslelcak drvgllsevt
      361 rilrenglsv rragvstvge kavnvfyvrd aygnpvdakt iealrkeigq tmmlnvkkdp
      421 sstkareaet sgwaktsfff gnllekfla
//
LOCUS       XP_040944366             374 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944366
VERSION     XP_040944366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088432.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..374
                     /product="ACT domain-containing protein ACR3 isoform X2"
                     /calculated_mol_wt=41765
     Region          <1..31
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          54..127
                     /region_name="ACT_ACR_2"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04925"
                     /db_xref="CDD:153197"
     Region          189..263
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          267..338
                     /region_name="ACT_ACR_4"
                     /note="C-terminal ACT domain, of a novel type of ACT
                     domain-containing protein which is composed almost
                     entirely of four ACT domain repeats (the 'ACR' protein);
                     cd04926"
                     /db_xref="CDD:153198"
     CDS             1..374
                     /gene="LOC107910404"
                     /coded_by="XM_041088432.1:862..1986"
                     /db_xref="GeneID:107910404"
ORIGIN      
        1 mdvfhvtdqq gkkitdgkti dyiervlgpk ghttdgmkdc pgkrvgvhsf gnhtaielig
       61 rdrpgllsei savlanlhfn vtvaevwthn rriacvlyvn dnttsgsvdd pnrlsimeeq
      121 lkhimrgced ddnvartsfs mgfthidrrl hqmlfadrdy egggvttevd yppsfkpkit
      181 verceekgys vvtvrckdra klmfdivctl tdmqyvvfha nissngpyas qeyfirhmdg
      241 ctldtegeke rvvkcleaai hrrvseglsl elcakdrvgl lsevtrilre nglsvrragv
      301 stvgekavnv fyvrdaygnp vdaktiealr keigqtmmln vkkdpsstka reaetsgwak
      361 tsfffgnlle kfla
//
LOCUS       XP_016693717             608 aa            linear   PLN 06-AUG-2024
DEFINITION  inactive protein kinase SELMODRAFT_444075 [Gossypium hirsutum].
ACCESSION   XP_016693717
VERSION     XP_016693717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838228.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..608
                     /product="inactive protein kinase SELMODRAFT_444075"
                     /calculated_mol_wt=68818
     Region          324..589
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(324..328,332,344,346,375,391..394,398,400,443,445,
                     447..448,450,461,464,480..483)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(324..328,332,344,346,375,391..394,398,443,445,
                     447..448,450,461)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(328,398,400,443,445,447,464,480..483)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(460..467,476..483)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..608
                     /gene="LOC107910403"
                     /coded_by="XM_016838228.2:214..2040"
                     /db_xref="GeneID:107910403"
ORIGIN      
        1 megnttphtp syvviafdat kdhnerefri iinhirvrgd ilrggdtllm lgvlhrvthp
       61 mgyqskpcpe sfgtslrame eelsnkvdsy vnllhqsaee ceeqgvsigv kitagvpikn
      121 vvlqevvask pawvvldrhl rrdlklylkq ipckvalvqd slnvdvlrnh tisepdigdq
      181 kvysmskyks vppsnfhfte nidpsetssr ryslstsyle ssksglftps stlkseehnf
      241 lsdfgpsskl eisdtytkgg sllfdtpnii qkqqrygfrn kstgspllcv acglrtelyi
      301 edskaftyte iqqatedfsk nnllgeggyg hvykgklkdg qliaakvrkq estqgfaefn
      361 sevsvlsfar hknivmllgy cckenlnilv yeyicnksly whlfentenv ldwhqrraia
      421 igtakglrfl heecrggpii hrdmrpgnil lthdlvpmlg dfglarwkin detlqtkvlg
      481 tfgylapeya engfvsvrtd vyafgivllq lisgrkvidy ksegqqvslr qwaepliekl
      541 alhelidpri eesydtyqly lmaktaylcv qmnpemrpsm aevlrllege adhfhqlkek
      601 avpqftkr
//
LOCUS       XP_040944367              99 aa            linear   PLN 06-AUG-2024
DEFINITION  inosine-5'-monophosphate dehydrogenase 2-like [Gossypium hirsutum].
ACCESSION   XP_040944367
VERSION     XP_040944367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088433.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..99
                     /product="inosine-5'-monophosphate dehydrogenase 2-like"
                     /calculated_mol_wt=10280
     Region          <1..99
                     /region_name="PLN02274"
                     /note="inosine-5'-monophosphate dehydrogenase"
                     /db_xref="CDD:215154"
     CDS             1..99
                     /gene="LOC107910402"
                     /coded_by="XM_041088433.1:1..300"
                     /db_xref="GeneID:107910402"
ORIGIN      
        1 mgsleamtkg sdqrclgdta klkiaqgvvg avadkgsvlk fipytmqavk qgfqdlgass
       61 lpsahehlrs gtlrfevrtg aaqaeggvhg lvsyekksf
//
LOCUS       XP_016693710             677 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g77010,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693710
VERSION     XP_016693710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838221.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..677
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g77010, mitochondrial"
                     /calculated_mol_wt=74935
     Region          10..36
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          43..676
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          47..72
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          76..103
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          105..135
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          203..231
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          234..262
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          265..294
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          339..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          366..395
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          397..423
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          432..461
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          471..496
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          500..527
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          533..562
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          569..595
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..677
                     /gene="LOC107910396"
                     /coded_by="XM_016838221.2:350..2383"
                     /db_xref="GeneID:107910396"
ORIGIN      
        1 mtmeldhqyy grllqscttr nsillgkqlh lfflkkgilg stltvgnrll qmyarcgtma
       61 etwklfdemp qrnffswntl iegymksgnk ekslelfqlm phkndfswnl visgfakage
      121 levagalfdd mprkngfacy smihgyarng eakkaielfk esgslgdafv latvvgacvd
      181 lgaieygkqi hahmvvagie ldpvlcssli nlygkcgdld gasrvlnlmt epddfslsal
      241 isgyatcgrm tdarrifdrk sdpsvvlwns lisghvlnne eikalalfnk mrekgvredf
      301 ssiavilrac sslyilehvk qmhghahkvg avsdvivast lidsyskfgk pndacklfse
      361 leaydtilln smitvysscg riedakqifm tmpnkslisw nsmivglsqn gcpvealdlf
      421 fkmnklnlri dkftlasais acasissiel gdqvfakath iglesdqiis tslvdfyckc
      481 glveygrkif dtmtksdeis wnsmlmgyat nghgfealll fneminagva ptdvtfiavl
      541 sacdhcglle egrkwfnsmk rdyhydpgie hyscmvdlfa rvgcleeamd ligempfkad
      601 aslwlsvlrg cvahgdktlg kevaeriiel dpgnssayvq lsslfatsge wetsaivrki
      661 mrekqiqknp gfswads
//
LOCUS       XP_016693711             639 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g43980,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693711
VERSION     XP_016693711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..639
                     /product="pentatricopeptide repeat-containing protein
                     At1g43980, mitochondrial"
                     /calculated_mol_wt=71893
     Region          18..45
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          53..611
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          55..80
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          84..111
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          113..142
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          148..209
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          212..239
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          282..310
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          315..342
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          348..411
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          415..442
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          448..477
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          484..510
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..639
                     /gene="LOC107910397"
                     /coded_by="XM_016838222.2:141..2060"
                     /db_xref="GeneID:107910397"
ORIGIN      
        1 mrpflkpiyw sqkptlshyn nlinhclsln sikfaqtiha qlikfgfsgt tflgnrfvdl
       61 ylkfgsfhdv skvfeeindk nviswniwln gllkfghfkk acslfdempe kdvvswnsmi
      121 sgcgllgfwd hglevfkqmq nfgvrpskft fsilttlvsc arqgkeihcn mitsgvclsn
      181 lvignslidm ygklglvqya fgvllsmeev dvvswnslis gccksghedl aleqfdqmra
      241 sgyspdeytl snaiavctnl rnldkgnqif alcikmgfis npivssaiid lfskcnvlkd
      301 svkhfeevqr wdslvcnsmi sgyarhglqd dvfllfllaf redcrpteft lssilscinf
      361 lsveqgpqih slviksgfss elivatslvd mytniglids amqvfsemhv kdiiswntli
      421 mglahngrav etlelfkell reglardrit lsgillacrc ggfvdvgmsi fssmeeefgv
      481 tprdehyacv idmlchagkf keafdtletm pfepsflvwk slalatttyt nlnitetiak
      541 kmieqkpqss lpysvlnray emsgkwegii rvkkamkqrl kktvgcswig tknhvfmfea
      601 drlqheggkd iylilelltw eleenssihv eleiegakg
//
LOCUS       XP_016693713             479 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016693713
VERSION     XP_016693713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..479
                     /product="2-oxoisovalerate dehydrogenase subunit alpha 1,
                     mitochondrial"
                     /calculated_mol_wt=53404
     Region          113..457
                     /region_name="AcoA"
                     /note="TPP-dependent pyruvate or acetoin dehydrogenase
                     subunit alpha [Energy production and conversion]; COG1071"
                     /db_xref="CDD:440689"
     CDS             1..479
                     /gene="LOC107910399"
                     /coded_by="XM_016838224.2:219..1658"
                     /db_xref="GeneID:107910399"
ORIGIN      
        1 maswgrrssg mvhhikalsk velrgkagem kggwwryplq pgvasalvpr swpcvntmas
       61 lflvqrfkss lpqkqveddd gdqdldfpgg kvaytsemkf isgsydkrip cyrvlgddge
      121 likdgsdfek vnkelavkmy sdmvclqimd tfmyeaqrqg risfymtsfg eeaatissaa
      181 altkddiilp qyrepgallw rgftlqefvn qcfgnkddgg kgrqmpvhyg sskhnfvtvs
      241 spiatqlpqa agmayslkmd kkdacvvafi gdggtsegdf haglnfaavm eapvifvcrn
      301 ngwaistpts dqfrsdgvvv kgqaygipsi rvdgtdalav ysairaarsm aineqrpvlv
      361 eslayrvghh stsddstkyr slneiehwkt drdpvnkfrk wvelngwwse rdeadlrssi
      421 kkqllkaiqv aegmekpplt elftdvydlp psnlieqekl lrqivnkypr dfpsdvslh
//
LOCUS       XP_016693712             338 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693712
VERSION     XP_016693712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838223.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37250
     CDS             1..338
                     /gene="LOC107910398"
                     /coded_by="XM_016838223.2:128..1144"
                     /db_xref="GeneID:107910398"
ORIGIN      
        1 maphppfkps siaplplpsp ftqlsyqpnm fdptkelpks yvslsdhltg gfsdcndsyd
       61 ramnygpkvq ktaqnyanys swntlegrfe aetlmaddes gisspplwks spqhennvny
      121 rclspssraq aiargqkelm emvskmpesc yelslkdlve hqpvvvvepk qesfaqgrgs
      181 nsiderkykn ekqnsqkqql srsgslvdng gfllkmvfpv slgskkkkkm kkntskkndp
      241 ntngnskvsp kptvadasgk tvdkdwwkkr sgssesdssg stiksgstks irssssgsgr
      301 syrsisttsr rhrrsgclaf ifpkktkalr skeanpqs
//
LOCUS       XP_016693715             296 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693715
VERSION     XP_016693715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838226.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=33694
     CDS             1..296
                     /gene="LOC107910400"
                     /coded_by="XM_016838226.2:129..1019"
                     /db_xref="GeneID:107910400"
ORIGIN      
        1 mgtnpsprva ialdatkdln qrelsatisn vrargdilvn gdtlvvlgil akvtlplgyq
       61 skasllstse tsiramheei skkvdtyvrm lqqsaqdcer qgvrvevkii ggastkdivi
      121 keaasckavi ldrklrqdlq fyldkipcke vtsfqdsivl eilradaqre aditaikklf
      181 yiyykarpvl qsnfqanntn edlrkikill tyerilqkrk qdtiqtgcfp krkaysdeel
      241 lnvvlplvfd elekikpetw keigwfrrkv iafrvvlkaq rlrkeklrha skmkfa
//
LOCUS       XP_016693716             268 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693716
VERSION     XP_016693716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838227.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..268
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=29744
     CDS             1..268
                     /gene="LOC107910400"
                     /coded_by="XM_016838227.2:132..938"
                     /db_xref="GeneID:107910400"
ORIGIN      
        1 mgtnpsprva ialdatkdln qrelsatisn vrargdilvn gdtlvvlgil akvtlplgyq
       61 skasllstse tsiramheei skkvdtyvrm lqqsaqdcer qgvrvevkii ggastkdivi
      121 keaasckavi ldrklrqdlq fyldkipcke vtsfqdsivl eilradaqre aditaikklf
      181 yiyykarpvl qsnfqanntn edlrkikill tyerilqkrk qdtiqtgcfp krkaysdegd
      241 rvvqekgnri sggfkgataa kgkaetcf
//
LOCUS       XP_016693709             252 aa            linear   PLN 06-AUG-2024
DEFINITION  magnesium dechelatase SGRL, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693709
VERSION     XP_016693709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838220.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="magnesium dechelatase SGRL, chloroplastic"
                     /calculated_mol_wt=27997
     Region          61..210
                     /region_name="Staygreen"
                     /note="Staygreen protein; pfam12638"
                     /db_xref="CDD:403741"
     CDS             1..252
                     /gene="LOC107910395"
                     /coded_by="XM_016838220.2:231..989"
                     /db_xref="GeneID:107910395"
ORIGIN      
        1 machyayyas fspsvtlrgf gaknreprpf qvhlssissp vrasyntlvs eaarllvpta
       61 ifeasklkvv fmgeglksys aiiprtyils hcdftanltl tisnvinldq lkgwynnddv
      121 vaewkkvket mflnvhcfvs gpnllldvaa efryhifske lplvlkavlh gdsvlfaehp
      181 elmdalvcvy fhsslpkynr lecwgplkda aegkpgdqvk glltadkess sspskwgrsp
      241 ksifqalftf ll
//
LOCUS       XP_016733273             745 aa            linear   PLN 06-AUG-2024
DEFINITION  putative wall-associated receptor kinase-like 16 [Gossypium
            hirsutum].
ACCESSION   XP_016733273
VERSION     XP_016733273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877784.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..745
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /calculated_mol_wt=82586
     Region          34..90
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          286..320
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(286,289,304)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          421..688
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(421..425,429,441,443,472,488..491,495,497,540,542,
                     544..545,547,558,561,578..581)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(421..425,429,441,443,472,488..491,495,540,542,
                     544..545,547,558)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(425,495,497,540,542,544,561,578..581)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(557..564,574..581)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..745
                     /gene="LOC107943965"
                     /coded_by="XM_016877784.2:115..2352"
                     /db_xref="GeneID:107943965"
ORIGIN      
        1 mgsirslvlm qlmillnvil tvkastpavs kpgcrsrcgd viipypfgtg gdcsitagff
       61 incntsfiph kpffgdlevi nistdgqlri lsptsydcyd rprnrlfyyf llsefsinnn
      121 knkftaigcd tyavvqdfyg qryatgclsl cnnitdvsng scsgigccqt sipkdvrsyn
      181 isldsyaeha nvltenpcsy afvaevdsyn fsasdlggve fqsrqfpitl dwnigntscn
      241 eanmdvnnfa ckeyskcvds ennsgylckc legymgnpyl pngcqdinec esmspcngta
      301 ictnlpgtyn cscpmgyegd gkksgtgcsl pnkdqsktsp livalgvaig flglllgivl
      361 ccwmlrqrqi sklreanfqq nggillreql skrqgyredv kvftaeelek atnnynesri
      421 lgqggqgtvy kgiladnqiv aikksiigdp sqveqfinei mvlykinhrn vvkllgccle
      481 tqvpllvyey itnrtlfhhl hnddatsyls wetrlriate taealsylhs aasipiihrd
      541 iklanilldd nytpkvsdfg asrlipsdea qittivqgtf gyldpeymls sllteksdvy
      601 sygvvlmell tgqkvvcfkr peenrvlply fsslmkedrl ldildprvln denveqllev
      661 ailarrcvrv kgeerptmke vahelaglqa makhpwsksn lvseeseyll gkfpstyddg
      721 vtsssigmgy dsinnkitfe legar
//
LOCUS       XP_016693659             748 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase 5 [Gossypium hirsutum].
ACCESSION   XP_016693659
VERSION     XP_016693659.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838170.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693659.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..748
                     /product="wall-associated receptor kinase 5"
                     /calculated_mol_wt=83253
     Region          34..90
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          289..323
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(289,292,307)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          424..691
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(424..428,432,444,446,475,491..494,498,500,543,545,
                     547..548,550,561,564,581..584)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(424..428,432,444,446,475,491..494,498,543,545,
                     547..548,550,561)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(428,498,500,543,545,547,564,581..584)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(560..567,577..584)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..748
                     /gene="LOC107910352"
                     /coded_by="XM_016838170.2:12..2258"
                     /db_xref="GeneID:107910352"
ORIGIN      
        1 mssirslvlm qlmillnvil tvkastpava kpgcrsrcgd viipypfgtg gdcnitagff
       61 incntsfiph kpffrnvevi nistdgqlri lsntsydcyn tsyrnwlfyy frlseflinn
      121 nknkftaigc dtyavvqqag sygqryatgc lslcnnitdv sngscsgigc cqtsipkdvr
      181 synisldsya nhtnvlpenp csyafvaevd sytfsasdlr gfefqsrqfp itldwnignt
      241 scneanmdvn nfackeyskc vdsennsgyf ckclegyvgn pylpngcqdi necesispcn
      301 gtarctnllg tyncscpvgy egdgkksgtg cslpnkdqsk tsplivalgv aigflglllg
      361 ivlwcwmlrq rqisklrean fqqnggillr eqlskrqgyr edvkvftaee lekatnnyne
      421 srilgqggqg tvykgiladn qivaikksii gdpsqveqfi neimvlykin hrnvvkllgc
      481 cletqvpllv yeyitnrtlf hhlhnddats ylswetrlri atetaealsy lhsaasipii
      541 hrdiklanil lddnytakvs dfgasrlips dqaqittivq gtfgyldpey mlssllteks
      601 dvysfgvvlm elltgqkvvc fkrpeenrvl pmyftslmke drlldildpr vlndenveql
      661 mevatlarrc vrvkgeerpt mkevahelag lqamakhpws ksnlvseese yllgkfpsty
      721 dngvtsssig mgydsinkki tfelegar
//
LOCUS       XP_016693660             745 aa            linear   PLN 06-AUG-2024
DEFINITION  putative wall-associated receptor kinase-like 16 [Gossypium
            hirsutum].
ACCESSION   XP_016693660
VERSION     XP_016693660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838171.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..745
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /calculated_mol_wt=82665
     Region          34..87
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          286..320
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(286,289,304)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          421..688
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(421..425,429,441,443,472,488..491,495,497,540,542,
                     544..545,547,558,561,578..581)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(421..425,429,441,443,472,488..491,495,540,542,
                     544..545,547,558)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(425,495,497,540,542,544,561,578..581)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(557..564,574..581)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..745
                     /gene="LOC107910353"
                     /coded_by="XM_016838171.2:220..2457"
                     /db_xref="GeneID:107910353"
ORIGIN      
        1 mgsirsvvlm qlmillnvil tvkastpava kpgcrsrcgd viipypfgtg gdcnitagff
       61 incntsfiph kpflgdfevi nistdgqlrt lsntsydcyn tpwnrlfyyf llsefsinnt
      121 knkftaigcd tvavmqdfdg qryatgclsf cnnitdvsng scsgvgccqt sipkdvrsyn
      181 islgspfnht yvlpenpcsy afvaeidsyt fsasdlrgfe fksrqfpiil dwkighnscn
      241 eanmdvdnfa ckehskcvds ennsgylckc legyegnpyl pngcqdinec esmspcngta
      301 ictnlpgtyn cscpggyegd gkksgtgcsl pnkdqsktsp liaalgvaig flglllgivl
      361 wcwmlrqrqi sklreanfqq nggillreql skrqgyredv kvftaeelek atnnynesri
      421 lgqgglgtvy kgiladnqiv aikksiigdp sqveqfinei mvlykinhrn vvkllgccle
      481 tqvpllvyey itnrtlfhhl hnddatsyls wetrlriate taealsylhs aasipiihrd
      541 iklanilldd nytpkvsdfg asrlipsdea qittivqgtf gyldpeymls sllteksdvy
      601 sygvvlmell tgqkvvcfkr peenrvlply ftslmkedrl ldildprvln denveqlmev
      661 ailarrcvrv kgeerptmke vahelaglqa iakhpwsksn lvseeseyll gkfpstyddg
      721 vtsssigmgy dsinnkitfe legar
//
LOCUS       XP_016693661             821 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT24 [Gossypium hirsutum].
ACCESSION   XP_016693661
VERSION     XP_016693661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838172.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..821
                     /product="probable methyltransferase PMT24"
                     /calculated_mol_wt=92054
     Region          <89..287
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     Region          301..805
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..821
                     /gene="LOC107910354"
                     /coded_by="XM_016838172.2:359..2824"
                     /db_xref="GeneID:107910354"
ORIGIN      
        1 mamakysrvd grksssycst avivvfvafc lvgiwmfmss svvplensdl ssqetrneak
       61 qtlqegvskq fddtsgdise datreggtmp gkvslntdee srksveenqe enhgndssde
      121 ktdseneqrt vdgddgsgng kdgemdsreg esnlesgqae neggemnnnv qaeseensge
      181 irsesaeggk nsdeevsedk ikhvdkedis tvdnneknqd gnsepsaien saeseennqt
      241 sneilptaaq seiltesttq ngawstqaee sqnekkwqqa sisneendhq wkvckstagp
      301 dyipcldnwq virklpstkh yehrerhcps epptclvplp egykrsikwp ksrdkiwyyn
      361 vphtklaevk ghqnwvkvtg eyltfpgggt qfkngalhyi dflqqsvpdi awgkrsrvil
      421 dvgcgvasfg gylferdvla msfapkdehe aqvqfalerg ipailnvmgt krlpfpssvf
      481 dvvhcarcrv pwhveggkll lelnrvlrpg gyfiwsatpv yqklpedvgi wqemsrltks
      541 mcwdlvtvkk drlnavgaai yqkpasndcy ykrsknappl ceesddpnaa wnvslqacmh
      601 kvpedsterg slwpvqwper leqppywlns qigvygkaaq edftadynhw ktvisesylk
      661 gmgidwssvr nvmdmkavyg gfaaalkdlk vwvmnvvpid gadtlpviye rglfgihhdw
      721 cesfntyprt ydvlhadhlf ssiqnrcklv aviaevdril rpegklivrd kaetisaves
      781 makslqweir miyskdgegl lcvrkkfwrp tveepiksai v
//
LOCUS       XP_040944368             770 aa            linear   PLN 06-AUG-2024
DEFINITION  putative wall-associated receptor kinase-like 16 [Gossypium
            hirsutum].
ACCESSION   XP_040944368
VERSION     XP_040944368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088434.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..770
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /calculated_mol_wt=85555
     Region          57..115
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          312..344
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(312,315,328)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          446..713
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(446..450,454,466,468,497,513..516,520,522,565,567,
                     569..570,572,583,586,603..606)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(446..450,454,466,468,497,513..516,520,565,567,
                     569..570,572,583)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(450,520,522,565,567,569,586,603..606)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(582..589,599..606)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..770
                     /gene="LOC107910355"
                     /coded_by="XM_041088434.1:93..2405"
                     /db_xref="GeneID:107910355"
ORIGIN      
        1 mpghrrtklk hrsismynlg ntamglirsv llmqlmifln viltvkastp avakpgcqsr
       61 cgdviipypf gtggdcnite qflitcntsy ipnkaflgng nlevinistd gqlrifsnas
      121 ydcyntsyrn wsyyrlqlyk fsinnnknkf taigcdtyar vegylgqrya tgclslcnni
      181 tdvsngscsg igccqtsipk gvmsynitie syenhvdvlp enpcsfafva endnyifsas
      241 dlrgsnfkdk qfpvtvdwti gttsckeakm dtknfacqen sncvdsenns gyfckcfkgy
      301 egnpylpngc qdinecetms scngtcinlp gtfncscpeg yegdgwkngt gcslpnrdks
      361 krsplidial gssigflgll lgivslcwml rqrqisklkd ayflqnggil lreelskrqg
      421 yredvkvfta eelkkatnny hesrilgqgg qgtvykgila dnrivaikks iigdpsqveq
      481 fineimvlyq inhknvvkll gccletqvpl lvyeyitngt vfhhlhndda ashlpwetrl
      541 riatetaeal sylhsaasip iihrdiklan illdenhtak vsdfgasrli psdqaqitti
      601 vqgtfgyldp eymltsllte ksdvysfgvv lmemltgqkv vcfkrseesr vlamyfvslm
      661 kenrlldild prvlndenve qlkevatlac rcvrvkgeer ptmkevahel aglqampkhp
      721 wsksnlagee seyllgkfps tyddgvtsss mgmgydsinn kitfelegar
//
LOCUS       XP_040944369             751 aa            linear   PLN 06-AUG-2024
DEFINITION  putative wall-associated receptor kinase-like 16 [Gossypium
            hirsutum].
ACCESSION   XP_040944369
VERSION     XP_040944369.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088435.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..751
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /calculated_mol_wt=83195
     Region          37..98
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          293..327
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(293,296,311)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          429..696
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(429..433,437,449,451,480,496..499,503,505,548,550,
                     552..553,555,566,569,586..589)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(429..433,437,449,451,480,496..499,503,548,550,
                     552..553,555,566)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(433,503,505,548,550,552,569,586..589)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(565..572,582..589)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..751
                     /gene="LOC107910357"
                     /coded_by="XM_041088435.1:267..2522"
                     /db_xref="GeneID:107910357"
ORIGIN      
        1 mglirsvvli vqlvillnat saakataava yqansscqsr cgevsipypf gtggdcnvsk
       61 hffitcntsf tpskafltts sieildisld gqlriladgs ydcynksgat rnfrywlrls
      121 kffinntrnk ftaigcdtya rvegfsgqry atgclslcnn isdvsngscs gigccqtsip
      181 kgvksyqitt esyenhadal penpcsyafv aendnytfst sdlrgfdfkd klfpvtldwt
      241 igqksckkak mdtksfackk nskcidsehn sgyickcfeg ydgnpylpng cqdinecetm
      301 spcdgtatci nlngtydcsc ppsyegdgkk ngtgcslpnk dqskrsllid valgigigfl
      361 glllgivllc wmlkqrqise lkrvnfqqng gillreqlsk rqgyreevkv ftveelekat
      421 nnyhesrilg qggqgtvykg iladnrivai kksiigdpsq veqfineimv lyqinhrnvv
      481 kllgccletq vpllvyeyit ngtlfhhlhd ddaaldlpwe trlriateta ealsylhsav
      541 sipiihrdik lanilldnny nakvsdfgas rlipsdeaqi ttivqgtfgy ldpeymhtsl
      601 lteksdvysf gvvlmelltg qkvvcfkrse ekrvlamyfv slmkednlld ildprvltdk
      661 nveqlkevat lasrcvrmkg eerptmkeva helaglqamp khpwsksklq geeseyllgd
      721 mcstytddat sssmgydsin nkitfelega r
//
LOCUS       XP_016693665             716 aa            linear   PLN 06-AUG-2024
DEFINITION  putative wall-associated receptor kinase-like 16 [Gossypium
            hirsutum].
ACCESSION   XP_016693665
VERSION     XP_016693665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838176.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="putative wall-associated receptor kinase-like
                     16"
                     /calculated_mol_wt=80098
     Region          423..688
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(423..427,431,443,445,474,490..493,497,499,542,544,
                     546..547,549,560,563,580..583)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(423..427,431,443,445,474,490..493,497,542,544,
                     546..547,549,560)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(427,497,499,542,544,546,563,580..583)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(559..566,577..583)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..716
                     /gene="LOC107910359"
                     /coded_by="XM_016838176.2:295..2445"
                     /db_xref="GeneID:107910359"
ORIGIN      
        1 matlalvril qlilfsclla agesmasqal pgckdecgnm sipypfgmtp gcylnesfli
       61 tcntsvsphr pqlingniev tnitlegqve ilhyvakdcy yrngttedwf ypwlraamft
      121 isnrnkfiav gcdtraqiwa krehdnstyf tgcmayceka dalhlngscs gvgccqvsip
      181 sglknlnmsv vsyynhtrvw dfnpcsyafv vdenkfsfsd ksfgelahke slpmaldwai
      241 gnepcnvseh kpdyackqns icynpenrsg ylckckdgyn gnpyhphgce dideckdssl
      301 hncisernci ntpgtykcfc tkgfngdgkk drkgcmrnqa nvikisivig lcvlvvivgs
      361 swlffinkkr kllnmkkkff kqngglllqq elheqrvste tvkiftaeal knatknydes
      421 qiigkggfgt vykgilkngt evaikkskvv dqsqikqfin eviiltqinh rnvvkllgcc
      481 letevpllvy efvsngtlse hihcedkass iswgirlria tesaqvlsyl hsaasipiih
      541 rdvkptnill ddnytakvsd fgasrlvpmd qtqlstmvqg tlgyldpeyl ctaqlteksd
      601 vysfgvvlve lltgktaysf egpeeernlv nhfvlwlknd rlfeilddkv akegavkqik
      661 evaklakkcl nvkgeerpsm kevaqvledv rrlrcdhpwa evavnleete fllget
//
LOCUS       XP_040944370             239 aa            linear   PLN 06-AUG-2024
DEFINITION  wall-associated receptor kinase 2-like [Gossypium hirsutum].
ACCESSION   XP_040944370
VERSION     XP_040944370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088436.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..239
                     /product="wall-associated receptor kinase 2-like"
                     /calculated_mol_wt=26432
     Region          32..87
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     CDS             1..239
                     /gene="LOC107908014"
                     /coded_by="XM_041088436.1:192..911"
                     /db_xref="GeneID:107908014"
ORIGIN      
        1 matlalrilq lilfscllaa gasvasqalp gckhecgnls ipypfgmtpg cnlnedflit
       61 yntsvspprp qlldgnlevt nitlegqvei lnyvakdcyn hngtnadwnf pqlraamfti
      121 sndrnnfidv gcdtkaqiwd erehnnstyf tgsmayceet dalhlngshs gvgccqvsip
      181 sglknlnmsv lsyynhtrvw dfnpcsyafv vdeskfsfsd ksfgelahke flpmaldwk
//
LOCUS       XP_016693666             667 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT10 [Gossypium hirsutum].
ACCESSION   XP_016693666
VERSION     XP_016693666.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838177.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..667
                     /product="probable methyltransferase PMT10"
                     /calculated_mol_wt=75097
     Region          162..665
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..667
                     /gene="LOC107910360"
                     /coded_by="XM_016838177.2:363..2366"
                     /db_xref="GeneID:107910360"
ORIGIN      
        1 mkptapitst tatvtasstt iealktlkfv klvaivvlsv slvflathls ysssssfsin
       61 yslltpqasp pvsppppppp spppsppppa vrrtgiiden gamsdeffvg esgsnsttgl
      121 tefsdgdeeg reqeeeerks ksdgdvrvgv ekykvcdksk vdhipcldnk kaiklfskse
      181 kgekyerhcp gkdemldcvi prpegyqrsi pwpqsrdevw fsnmphtrlv edkggqnwis
      241 ikkdkfifpg ggtqfihgad qylnqisqmv peisfghrvr valdigcgva sfgafllqrn
      301 vttlsiapkd vhenqiqfal ergvpamvav fathrllyps qafdlihcsr crlnwtrdde
      361 illlevnrml raggffvwaa qpvykheeil qqqwkemedl taricwelvk kegyiaiwrk
      421 plnnscylnr dtgvlpllcn sndnsdnvwy vdlracitql pvngygsnvs twparlhdpp
      481 drlqsiemna yisrkeifra eskywneiid syvrafhwkd lklrnvmdmr aglggfaaal
      541 hdlqidcwvm nvvpvsgfnt lsviydrgli gvmhdwcepf dtyprtydll haaglfsvek
      601 krcnmstiml emdrmlrpgg rvyirdsisv mgelqeiata mgwvamlhet gegphaswki
      661 lisekrm
//
LOCUS       XP_016691023             196 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML44 [Gossypium hirsutum].
ACCESSION   XP_016691023
VERSION     XP_016691023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835534.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..196
                     /product="probable calcium-binding protein CML44"
                     /calculated_mol_wt=22049
     Region          37..191
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..196
                     /gene="LOC107908351"
                     /coded_by="XM_016835534.2:83..673"
                     /db_xref="GeneID:107908351"
ORIGIN      
        1 mlssssssyl qealickasr fdvngdhilf ggkmsplskt dlqrvfekld kngdgfvsle
       61 elnwllqrig svqfsleele plvgkpclnl deflffyesi snplahggde eeeeelvihg
      121 ggeeedsdla kafkvfdlng dgfisceele yvlgrlglwd ensgkdcrsm iwyydtnsdg
      181 mvdfqefknm mlhsrs
//
LOCUS       XP_016693669             324 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693669
VERSION     XP_016693669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838180.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=37843
     CDS             1..324
                     /gene="LOC107910362"
                     /coded_by="XM_016838180.2:226..1200"
                     /db_xref="GeneID:107910362"
ORIGIN      
        1 mgkvkkvkcy nggsemledl rfdnllaear sesfrvrnik einkqfseid medidsdygm
       61 fwsslidyis vlahkcdvqp skkikrdgki deslekllgs ldkfekypef ifgtyhtnrh
      121 rkydesceqp skeitcdsvv deslkeflgs ldkipefihg tyntnlnrky yrscsdlnil
      181 tlddtceggy apfvpstsla keeckdairt psqpqfrekv mallrtpydq kefdnlwrev
      241 tyrkpkqgag nichrlikny stktkeksll dlhqevrmki deyrsdrrkl lcllrgfffw
      301 leklpsyeda fpprldtlyl nalg
//
LOCUS       XP_016693668             324 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693668
VERSION     XP_016693668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838179.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=37843
     CDS             1..324
                     /gene="LOC107910362"
                     /coded_by="XM_016838179.2:247..1221"
                     /db_xref="GeneID:107910362"
ORIGIN      
        1 mgkvkkvkcy nggsemledl rfdnllaear sesfrvrnik einkqfseid medidsdygm
       61 fwsslidyis vlahkcdvqp skkikrdgki deslekllgs ldkfekypef ifgtyhtnrh
      121 rkydesceqp skeitcdsvv deslkeflgs ldkipefihg tyntnlnrky yrscsdlnil
      181 tlddtceggy apfvpstsla keeckdairt psqpqfrekv mallrtpydq kefdnlwrev
      241 tyrkpkqgag nichrlikny stktkeksll dlhqevrmki deyrsdrrkl lcllrgfffw
      301 leklpsyeda fpprldtlyl nalg
//
LOCUS       XP_016693670             312 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693670
VERSION     XP_016693670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838181.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..312
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=36599
     CDS             1..312
                     /gene="LOC107910362"
                     /coded_by="XM_016838181.2:247..1185"
                     /db_xref="GeneID:107910362"
ORIGIN      
        1 mgkvkkvkcy nggsemledl rfdnllaear sesfrvrnik einkqfseid medidsdygm
       61 fwsslidyis vlahkcdvqp skkikrdgki deslekllgs ldkfekypef ifgtyhtnrh
      121 rkydesceqp skeitcdsvv deslkeflgs ldkipefihg tyntnlnrky yrscsdlnil
      181 tlddtceggy apfvpstsla keeckdairt psqpqfrekv mallrtpydq kefdnlwrev
      241 tyrkpkqgag nichrlikny stktkeksll dlhqevrmki deyrsdrrkl lcllrgfffw
      301 lekllwgllf lf
//
LOCUS       XP_016693671             403 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693671
VERSION     XP_016693671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838182.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..403
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45883
     CDS             1..403
                     /gene="LOC107910363"
                     /coded_by="XM_016838182.2:315..1526"
                     /db_xref="GeneID:107910363"
ORIGIN      
        1 mdqyneidme dseygqffnn leqfdfhpdg nddgdddddv vaaasvaadg ggggdddkdg
       61 ddeeeelqkn peyncflenl kldengesyt vqipissdis lvlkyegkee esfenvdrqt
      121 nsksnlkrek akvsdilggf srkarpdtvk rpleirders kkklrnspgq erqsgdnenk
      181 leeeveahpv ackssgepsk mmnyaikdeq ctqflvsldk sgtktepsye kglqsthqkn
      241 dgscpdvevf tldnmplckg dytpfvpskc yqslageecg dgirssspsl freqlmdllk
      301 tpynreefqn lwrdvtqrkp vqgvkdlrhg rmksystktv gksyldwykd lrttvdefrp
      361 dtrkvlcllr gfffwlknta hegafkpwtd rsylkaltdq rni
//
LOCUS       XP_016693672             403 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693672
VERSION     XP_016693672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838183.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..403
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45883
     CDS             1..403
                     /gene="LOC107910363"
                     /coded_by="XM_016838183.2:318..1529"
                     /db_xref="GeneID:107910363"
ORIGIN      
        1 mdqyneidme dseygqffnn leqfdfhpdg nddgdddddv vaaasvaadg ggggdddkdg
       61 ddeeeelqkn peyncflenl kldengesyt vqipissdis lvlkyegkee esfenvdrqt
      121 nsksnlkrek akvsdilggf srkarpdtvk rpleirders kkklrnspgq erqsgdnenk
      181 leeeveahpv ackssgepsk mmnyaikdeq ctqflvsldk sgtktepsye kglqsthqkn
      241 dgscpdvevf tldnmplckg dytpfvpskc yqslageecg dgirssspsl freqlmdllk
      301 tpynreefqn lwrdvtqrkp vqgvkdlrhg rmksystktv gksyldwykd lrttvdefrp
      361 dtrkvlcllr gfffwlknta hegafkpwtd rsylkaltdq rni
//
LOCUS       XP_016693673            2316 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHH2 [Gossypium hirsutum].
ACCESSION   XP_016693673
VERSION     XP_016693673.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838184.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693673.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..2316
                     /product="histone-lysine N-methyltransferase ASHH2"
                     /calculated_mol_wt=251858
     Region          1275..1320
                     /region_name="zf-CW"
                     /note="CW-type Zinc Finger; pfam07496"
                     /db_xref="CDD:462181"
     Region          1384..1434
                     /region_name="AWS"
                     /note="associated with SET domains; smart00570"
                     /db_xref="CDD:197795"
     Region          1434..1576
                     /region_name="SET_SETD2"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 2 (SETD2) and similar proteins;
                     cd19172"
                     /db_xref="CDD:380949"
     Site            order(1445..1447,1464,1474,1478,1482,1487..1493,
                     1510..1514,1521..1523,1538,1549..1553,1555,1557..1560,
                     1562..1566,1575)
                     /site_type="active"
                     /db_xref="CDD:380949"
     Site            order(1445..1447,1487..1490,1510..1514,1551,1562..1566,
                     1575)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380949"
     Site            order(1464,1474,1478,1489..1493,1521..1523,1538,
                     1549..1553)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380949"
     Site            order(1516,1564,1566,1571)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380949"
     CDS             1..2316
                     /gene="LOC107910364"
                     /coded_by="XM_016838184.2:298..7248"
                     /db_xref="GeneID:107910364"
ORIGIN      
        1 mgscgnmtfv nepsrevasa aaeqhlcses mgklvseqra cvvidsngdy asepgedens
       61 ackrsgdidc kvgikgeaqi vgsgtkglmg geccensvcl kknggeiada scskalvgdm
      121 cgdsvvclen nqgdlmgdsg lkelmgnand dtvvclkdeg eimndsdske lmddrcrdci
      181 vysienqgek edgsfpldlr sdtyrdstvc signqgenvd gagskelmvd mcgdamvcln
      241 dnqgenpdcs gpeelmgyvd ntgysneiqc knvdsglnel kgdrisdhgv glnenqddvd
      301 ihdsvtdvcl eksgpsgedg tnaakgslgl sqdkntaals sgieistnce dqmkgdnenv
      361 vglmlkecmg nnqgricltg nmdvddhlds endvsqdgem pielntmsts prssvkldkq
      421 dddervngsi lqrileygem kfeekndave rkgtdvlnqi llsenfkgpf elidatgehk
      481 skdgmstycs ssevameekr evlteveani cnqmssiqgs hlastsigig dcrsdcprqn
      541 dlkdsntivg psldgesgas pviesdtcgk istsccveti snlqqtgdsv gscdghnqkd
      601 dlsssglsle sfpkpvetks tddlciella srrlfdtqkn aqtvgndisd ssgdgvaevs
      661 egrtdflayt kaeisseiii nakgkacnsn rdsfeqganc lcdkstslsc qpvdvvengl
      721 sgrldpqdll akdacaaiss sssidcsgqg enegkdivka dcvletknyp ttssssrkgr
      781 qkgkssrktp akrgarncss tklrhphesm eflfkatrrk rscsskpars siwglfsnia
      841 kfiepcpdps cnevqnrkps karggrgsgk rsknragqnr kessglsntl tsclrlkikv
      901 gkevapsnvn tlvaevvdps vligtsfsny gketnlqypt vanivedkve lgsemrfqsk
      961 edqemvktcs dvfltevkla nkavrcsenl erlsedatds slisqsdava easqeaienk
     1021 cmdpgtspds evintipdaq iglihqeesl dtvlntsgpl asprgaktsk gskrgkkdnh
     1081 rspgtastrk akssksrrsr ekttgnglvs iealtsssaa nssrenwigv pkeatemens
     1141 mdikdccspd vpdtkntkhf sssnskcnql skssrsqgas kgksrvsdsv ksrkakgskr
     1201 rgdesksvsk skvkekcsde eivarggksp vtgnqisddn ehlntgnsie sanmvnvdlv
     1261 pdgvmeqhtq pdnawvrcdd chkwrripvs lvksideayh wvcgdnvdka fadcsipqek
     1321 snadinaelg isdaeedgcd gfnykelekg fetkrmtvsp pshfwridsn qflhrgrktq
     1381 tideimvcqc krppdgklgc gdeclnrmln iecvqgtcpc gdlcsnqqfq nrkyammkwd
     1441 rfgkkgfglr mlenisaghf lieyvgevld mqayearqke yasrgqrhfy fmtlngsevi
     1501 dayvkgnlgr finhscdpnc rtekwmvnge iciglfalrd ikkgeevtfd ynyvrvfgaa
     1561 akkchcgsph crgyiggdpl saevivhdds deespepmml edgetwtgfk dvlsrsgssd
     1621 gaamqsvesv itdgvlkpen mpeaedsvnr sasatselnt veteeaspvt iasesvkpdg
     1681 teeqkamnkt scsiqkldas qdmsdnrlss dvidankksk sdaaedkqvs aksrplmkts
     1741 rssssikkgk issnslsgnk vqttsnkfqv stvkprkfse nsstcrfeav eeklnellds
     1801 vggitkrkda skgylkllll tatsgdsggg eaiqsnrels mildallktk sghvltdiin
     1861 knglqmlhni mkkyrkdfkk ipilrkllkv leylagrgil tqehinggpy cagresfres
     1921 ilsftehddk qvhqiarnfr dkwirkpvrk lgyrdkdegr meffrgldcn rvsashnhwr
     1981 dqairsteai ncimqsvvgs tssdtstreg gsslsvclsq tnstrirkrk srwdqpadte
     2041 kidsqspkkl ecsllsalgq atpdqiekmn sgdnkcqdsf skgeainien gnqrfqqdap
     2101 pgfssplnas lvsstapsta tgfpppkvgq lkcpdvviah pqkrfisrlp vsygiplpif
     2161 qqirlpeges leswaiapgi pfhpfpplpp cppdkkdtkp vsaalstgin adskegqqes
     2221 rrpstscpde svastaggnh pdsdipgtdi qqtlkrtres sydlgrkyfr qqkrkgpqwd
     2281 kseslgnnht geiccidvgn inneprnsyy sddinq
//
LOCUS       XP_040944371             237 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944371
VERSION     XP_040944371.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088437.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="aconitate hydratase isoform X1"
                     /calculated_mol_wt=26505
     Region          <43..>217
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..237
                     /gene="LOC107910366"
                     /coded_by="XM_041088437.1:1005..1718"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 mrppgailap desiivtvfk fveppennek qmdqksrvkf kimslkpmsm vlpgvvgfkl
       61 lgklrdgvta tdlvltvtqm lrkhgvvgkf vefygrvfns asilirihcf waascryflp
      121 llytaegmgk lsladratia nmspdygatm gffpvdhltl qylqltgrsd etiamiesyl
      181 rtnkmfvdyn epqiekvyss ylelkledve lcisgakevn nsrgaehsrd deddsva
//
LOCUS       XP_040944372             236 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944372
VERSION     XP_040944372.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088438.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..236
                     /product="aconitate hydratase isoform X2"
                     /calculated_mol_wt=26418
     Region          <43..>217
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..236
                     /gene="LOC107910366"
                     /coded_by="XM_041088438.1:960..1670"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 mrppgailap desiivtvfk fveppennek qmdqksrvkf kimslkpmsm vlpgvvgfkl
       61 lgklrdgvta tdlvltvtqm lrkhgvvgkf vefygrvfns asilirihcf waascryflp
      121 llytaegmgk lsladratia nmspdygatm gffpvdhltl qylqltgrsd etiamiesyl
      181 rtnkmfvdyn epqiekvyss ylelkledve lcisgakevn nsrgaehrdd eddsva
//
LOCUS       XP_016693675             207 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693675
VERSION     XP_016693675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838186.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..207
                     /product="aconitate hydratase isoform X3"
                     /calculated_mol_wt=23004
     Region          <43..>187
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..207
                     /gene="LOC107910366"
                     /coded_by="XM_016838186.2:959..1582"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 mrppgailap desiivtvfk fveppennek qmdqksrvkf kimslkpmsm vlpgvvgfkl
       61 lgklrdgvta tdlvltvtqm lrkhgvvgkf vefyaegmgk lsladratia nmspdygatm
      121 gffpvdhltl qylqltgrsd etiamiesyl rtnkmfvdyn epqiekvyss ylelkledve
      181 lcisgakevn nsrgaehsrd deddsva
//
LOCUS       XP_016693677             206 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016693677
VERSION     XP_016693677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838188.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="aconitate hydratase isoform X4"
                     /calculated_mol_wt=22917
     Region          <43..>187
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..206
                     /gene="LOC107910366"
                     /coded_by="XM_016838188.2:959..1579"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 mrppgailap desiivtvfk fveppennek qmdqksrvkf kimslkpmsm vlpgvvgfkl
       61 lgklrdgvta tdlvltvtqm lrkhgvvgkf vefyaegmgk lsladratia nmspdygatm
      121 gffpvdhltl qylqltgrsd etiamiesyl rtnkmfvdyn epqiekvyss ylelkledve
      181 lcisgakevn nsrgaehrdd eddsva
//
LOCUS       XP_016693678             206 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016693678
VERSION     XP_016693678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838189.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="aconitate hydratase isoform X5"
                     /calculated_mol_wt=22933
     Region          <43..>186
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..206
                     /gene="LOC107910366"
                     /coded_by="XM_016838189.2:959..1579"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 mrppgailap desiivtvfk fveppennek qmdqksrvkf kimslkpmsm vlpgvvgfkl
       61 lgklrdgvta tdlvltvtqm lrkhgvvgkf vefyegmgkl sladratian mspdygatmg
      121 ffpvdhltlq ylqltgrsde tiamiesylr tnkmfvdyne pqiekvyssy lelkledvel
      181 cisgakevnn srgaehsrdd eddsva
//
LOCUS       XP_040944374             205 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944374
VERSION     XP_040944374.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088440.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="aconitate hydratase isoform X6"
                     /calculated_mol_wt=22845
     Region          <43..>186
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..205
                     /gene="LOC107910366"
                     /coded_by="XM_041088440.1:959..1576"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 mrppgailap desiivtvfk fveppennek qmdqksrvkf kimslkpmsm vlpgvvgfkl
       61 lgklrdgvta tdlvltvtqm lrkhgvvgkf vefyegmgkl sladratian mspdygatmg
      121 ffpvdhltlq ylqltgrsde tiamiesylr tnkmfvdyne pqiekvyssy lelkledvel
      181 cisgakevnn srgaehrdde ddsva
//
LOCUS       XP_040944375             190 aa            linear   PLN 06-AUG-2024
DEFINITION  aconitate hydratase isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040944375
VERSION     XP_040944375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088441.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="aconitate hydratase isoform X7"
                     /calculated_mol_wt=21137
     Region          <1..>170
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     CDS             1..190
                     /gene="LOC107910366"
                     /coded_by="XM_041088441.1:85..657"
                     /db_xref="GeneID:107910366"
ORIGIN      
        1 msmvlpgvvg fkllgklrdg vtatdlvltv tqmlrkhgvv gkfvefygrv fnsasiliri
       61 hcfwaascry flpllytaeg mgklsladra tianmspdyg atmgffpvdh ltlqylqltg
      121 rsdetiamie sylrtnkmfv dynepqiekv yssylelkle dvelcisgak evnnsrgaeh
      181 srddeddsva
//
LOCUS       XP_016693679             333 aa            linear   PLN 06-AUG-2024
DEFINITION  PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016693679
VERSION     XP_016693679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838190.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="PLASTID TRANSCRIPTIONALLY ACTIVE protein 6,
                     chloroplastic"
                     /calculated_mol_wt=38146
     CDS             1..333
                     /gene="LOC107910367"
                     /coded_by="XM_016838190.2:123..1124"
                     /db_xref="GeneID:107910367"
ORIGIN      
        1 mvttttatlf lspplftaky sssslrinhs llpfpslkpk plhspstptl kpsflvrvdd
       61 gdadaggpdd ydmdeeevee ldnkkdfdve ydplaaasaa tassatidvd iqitesksfv
      121 stqgwdsdmv vdyrineeef hkislmdcdf firkppdpdn dvydfremyv sppdtdvysi
      181 pkvlapmpqk yircamsdyg cynvteppid aprdplykte revmkvfltk hyrnrrlgdp
      241 efvldfeeiy vidsktksit rakvlvtvpg grnrdrkndl lvirdngnsf kiihsserdd
      301 pttviereew dktrqdmerh lrklrdfsis nwf
//
LOCUS       XP_016693680             746 aa            linear   PLN 06-AUG-2024
DEFINITION  ubinuclein-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693680
VERSION     XP_016693680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838191.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..746
                     /product="ubinuclein-1 isoform X1"
                     /calculated_mol_wt=82985
     Region          119..169
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     CDS             1..746
                     /gene="LOC107910368"
                     /coded_by="XM_016838191.2:364..2604"
                     /db_xref="GeneID:107910368"
ORIGIN      
        1 mednsvggag epsgvvapkv mkagdrqvft velrpgetty vswrklvkda nrargssaas
       61 asavaapape lppnahpnlq sriapgqtte keekdepapn rfsaviekie rlymgkdssd
      121 eeeldetpdd dqydtedsfi ddaeldeyfe vdnsaikhdg ffvnrgklek ineppvipnq
      181 qpkkrrrkea akppsenddg hvsnkhakaa kmvagraeps lgknnsssqn ftavdeqyrd
      241 gkvlnqlsvs gvsskkkssa trlaldsssy mkdpnsdtsa pladvkdien lkmgflqskg
      301 vvsnklkdat gssdvlhqky hdksdlaqsk sqhgklssnv dkleqsvrlr enngihdlpd
      361 invsdgiham htaksphmlr kdgstlrpks svlekairel ekivaesrpp smenqeadts
      421 sqgikrrlpr eiklklakva rlaasqgkvs kellnrlmsi lghliqlrtl krnlkiminm
      481 gvsptakqek darfqqikke aiemiktrip sfetkilepq aratddfqei gseertfrrk
      541 fnmdapmenk icelydlyvd gldedagaqi rkfyvelaql wpdgmmnnhe ikhaicrake
      601 rrrarynrrk dqekmrrekm ltlgpeesvr vdsassaqsq htrersgsds gtqallstnt
      661 stshttaaaa vpvlsptnds sfdrvkqdkl kgisssamdd emkvavaslp kkkvkrkpem
      721 qldesymrpe klppqqgsnd rnksik
//
LOCUS       XP_016693681             710 aa            linear   PLN 06-AUG-2024
DEFINITION  ubinuclein-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693681
VERSION     XP_016693681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838192.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..710
                     /product="ubinuclein-1 isoform X2"
                     /calculated_mol_wt=79499
     Region          119..169
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     CDS             1..710
                     /gene="LOC107910368"
                     /coded_by="XM_016838192.2:307..2439"
                     /db_xref="GeneID:107910368"
ORIGIN      
        1 mednsvggag epsgvvapkv mkagdrqvft velrpgetty vswrklvkda nrargssaas
       61 asavaapape lppnahpnlq sriapgqtte keekdepapn rfsaviekie rlymgkdssd
      121 eeeldetpdd dqydtedsfi ddaeldeyfe vdnsaikhdg ffvnrgklek ineppvipnq
      181 qpkkrrrkea akppsenddg hvsnkhakaa kmvagraeps lgknnsssqn ftavdeqyrd
      241 gkvlnqlsvs gvsskkkssa trlaldsssy mkdpnsdtsa pladvkdien lkmgflqskg
      301 vvsnklkdat gssdvlhqky hdksdlaqsk sqhgklssnv dkleqsvrlr enngihdlpd
      361 invsdgiham htaksphmlr kdgstlrpks svlekairel ekivaesrpp smenqeadts
      421 sqgikrrlpr eiklklakva rlaasqgkvs kellnrlmsi lghliqlrtl krnlkiminm
      481 gvsptakqek darfqqikke aiemiktrip sfetkilepq aratddfqei gseertfrrk
      541 fnmdapmenk icelydlyvd gldedagaqi rkfyvelaql wpdgmmnnhe ikhaicrake
      601 rrrarynrrk dqekmrrekm ltlgpeesvr vdsassaqsq htresfdrvk qdklkgisss
      661 amddemkvav aslpkkkvkr kpemqldesy mrpeklppqq gsndrnksik
//
LOCUS       XP_016693682             654 aa            linear   PLN 06-AUG-2024
DEFINITION  ubinuclein-1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693682
VERSION     XP_016693682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838193.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..654
                     /product="ubinuclein-1 isoform X3"
                     /calculated_mol_wt=73000
     Region          119..169
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     CDS             1..654
                     /gene="LOC107910368"
                     /coded_by="XM_016838193.2:307..2271"
                     /db_xref="GeneID:107910368"
ORIGIN      
        1 mednsvggag epsgvvapkv mkagdrqvft velrpgetty vswrklvkda nrargssaas
       61 asavaapape lppnahpnlq sriapgqtte keekdepapn rfsaviekie rlymgkdssd
      121 eeeldetpdd dqydtedsfi ddaeldeyfe vdnsaikhdg ffvnrgklek ineppvipnq
      181 qpkkrrrkea akppsenddg hvsnkhakaa kmvagraeps lgknnsssqn ftavdeqyrd
      241 gkvlnqlsvs gvsskkkssa trlaldsssy mkdpnsdtsa pladvkdien lkmgflqskg
      301 vvsnklkdat gssdvlhqky hdksdlaqsk sqhgklssnv dkleqsvrlr enngihdlpd
      361 invsdgiham htaksphmlr kdgstlrpks svlekairel ekivaesrpp smenqeadts
      421 sqgikrrlpr eiklklakva rlaasqgkvs kellnrlmsi lghliqlrtl krnlkiminm
      481 gvsptakqek darfqqikke aiemiktrip sfetkilepq aratddfqei gseertfrrk
      541 fnmdapmenk icelydlyvd gldedagaqi rkfyvelaql wpdgmmnnhe ikhaicrake
      601 rrrarynrrk dqekmrrekm ltlgpeesvr vdsassaqsq htrersgsds vlte
//
LOCUS       XP_040944377             612 aa            linear   PLN 06-AUG-2024
DEFINITION  ubinuclein-1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944377
VERSION     XP_040944377.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088443.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..612
                     /product="ubinuclein-1 isoform X4"
                     /calculated_mol_wt=68283
     Region          119..169
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     CDS             1..612
                     /gene="LOC107910368"
                     /coded_by="XM_041088443.1:307..2145"
                     /db_xref="GeneID:107910368"
ORIGIN      
        1 mednsvggag epsgvvapkv mkagdrqvft velrpgetty vswrklvkda nrargssaas
       61 asavaapape lppnahpnlq sriapgqtte keekdepapn rfsaviekie rlymgkdssd
      121 eeeldetpdd dqydtedsfi ddaeldeyfe vdnsaikhdg ffvnrgklek ineppvipnq
      181 qpkkrrrkea akppsenddg hvsnkhakaa kmvagraeps lgknnsssqn ftavdeqyrd
      241 gkvlnqlsvs gvsskkkssa trlaldsssy mkdpnsdtsa pladvkdien lkmgflqskg
      301 vvsnklkdat gssdvlhqky hdksdlaqsk sqhgklssnv dkleqsvrlr enngihdlpd
      361 invsdgiham htaksphmlr kdgstlrpks svlekairel ekivaesrpp smenqeadts
      421 sqgikrrlpr eiklklakva rlaasqgkvs kellnrlmsi lghliqlrtl krnlkiminm
      481 gvsptakqek darfqqikke aiemiktrip sfetkilepq aratddfqei gseertfrrk
      541 fnmdapmenk icelydlyvd gldedagaqi rkfyvelaql wpdgmmnnhe ikhaicrake
      601 rrrarynrrk vd
//
LOCUS       XP_016691024             322 aa            linear   PLN 06-AUG-2024
DEFINITION  1-aminocyclopropane-1-carboxylate oxidase 5 [Gossypium hirsutum].
ACCESSION   XP_016691024
VERSION     XP_016691024.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835535.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="1-aminocyclopropane-1-carboxylate oxidase 5"
                     /calculated_mol_wt=36937
     Region          19..322
                     /region_name="PLN02299"
                     /note="1-aminocyclopropane-1-carboxylate oxidase"
                     /db_xref="CDD:215168"
     CDS             1..322
                     /gene="LOC107908352"
                     /coded_by="XM_016835535.2:164..1132"
                     /db_xref="GeneID:107908352"
ORIGIN      
        1 mavllffffl lfdisraipv ldfsklnghe raktlahian acedwgffhl vnhgiaedll
       61 ervkkvstdf yklereenfk nskvvkllne tgdkklenvd wedivtltdd nenewpsqtp
      121 gfketfkefr yelkklaeki levldenlgl pkghikkafd geegennaff gtkvshyppc
      181 pnperviglr phtdagglil lfqddevggl qvwkdgewid veplkntivi svgdqievis
      241 ngryksawhr vfsttdsnrr svasyynpsh katiapapql mketneewnq aypkfvfgdy
      301 msvyyqqkfh pkeprfqavs am
//
LOCUS       XP_016693683             307 aa            linear   PLN 06-AUG-2024
DEFINITION  1-aminocyclopropane-1-carboxylate oxidase 5 [Gossypium hirsutum].
ACCESSION   XP_016693683
VERSION     XP_016693683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838194.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="1-aminocyclopropane-1-carboxylate oxidase 5"
                     /calculated_mol_wt=34652
     Region          1..307
                     /region_name="PLN02299"
                     /note="1-aminocyclopropane-1-carboxylate oxidase"
                     /db_xref="CDD:215168"
     CDS             1..307
                     /gene="LOC107910369"
                     /coded_by="XM_016838194.2:224..1147"
                     /db_xref="GeneID:107910369"
ORIGIN      
        1 maipvidfsk lngderaktl teianaceew gffqlvnngi aeellervkk vssefykver
       61 eenfknskvv nllnesgdek lenvdwedvi tltddnvsew syqtsgfqet mkefrdelki
      121 laekimevmd enlglpkgym ekafngegge nnaffgsklc hyppcpnpek vtglrahtda
      181 ggvillfqdd evgglqvlkd gewidvqplk ntivintgdq ievlsngryk sawhrvlsti
      241 dgnrlsiasf ynpslkatia papqlvketn eemdktypkf vfgdymsvyv qqkflpkepr
      301 fqavrav
//
LOCUS       XP_040944378             799 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944378
VERSION     XP_040944378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088444.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..799
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=88539
     Region          7..56
                     /region_name="RING-HC_TRIM32_C-VII"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 32 (TRIM32) and similar proteins;
                     cd16587"
                     /db_xref="CDD:438249"
     Region          <504..790
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          511..546
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          552..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          601..636
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          643..676
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          683..719
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          724..760
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          769..790
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..799
                     /gene="LOC107910373"
                     /coded_by="XM_041088444.1:2078..4477"
                     /db_xref="GeneID:107910373"
ORIGIN      
        1 mesqdlpecp vclqpydgec tiprvlacgh tvcescllnl pkklpgairc pactvlvkyp
       61 pegpttlpkn idllrlipgg senprkpvnk sknvsnlpfl prswsdefys nwksyllrdd
      121 tverdqvsll pvgsfssgge dgslfkagyl vrvmdclrem keeergelgl vlraftkqnc
      181 ricrvlglwg dlgdgvlyla sekqkrgnfl dknlgcfeke gvfnfalmgm emceavislh
      241 kegliagcls fscfqlddfg hiyldlievl ltgrgiqdvv anvgfsgkki gdgeirmlfk
      301 dllkrdvfvc pevllkllek egtgveccsl kypiryssda wllscillri vngdvfsdew
      361 veymchiivk gsenseidcs svytssmekv ssllgtkfga ecvslqqilc kcldldpesr
      421 slvvdvwkci relvirpqfd kmvklygasy denvgrcmvv gklcllsrer tetqekdelq
      481 gkeangatdm vngltegrik wkdlqghldc vtglavgggy lfsssfdksv kvwslqdysh
      541 vhtfrghehk vmavvcvdee qplcisgdsg ggiflwsini pfgqeplkkw yeekdwrysg
      601 ihalavseng ylytgsgdkl ikewslrdgt lsgtmtghks vvsaiavnng vlysgswdgt
      661 vrlwslsdhs lltvlgedmp ravstvlsla adqhtliaty engsvkiwrh dvlrksmqih
      721 ngaiftvsld gkwlftgswd rtikaqelag ddvevdvrhi gsipcdsvit alsysegklf
      781 vgfgdrtvkv csipfcsfs
//
LOCUS       XP_016693685             795 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693685
VERSION     XP_016693685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838196.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..795
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=88216
     Region          7..56
                     /region_name="RING-HC_TRIM32_C-VII"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 32 (TRIM32) and similar proteins;
                     cd16587"
                     /db_xref="CDD:438249"
     Region          <504..791
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          511..546
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          552..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          601..636
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          643..676
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          683..719
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          724..760
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          769..791
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..795
                     /gene="LOC107910373"
                     /coded_by="XM_016838196.2:2078..4465"
                     /db_xref="GeneID:107910373"
ORIGIN      
        1 mesqdlpecp vclqpydgec tiprvlacgh tvcescllnl pkklpgairc pactvlvkyp
       61 pegpttlpkn idllrlipgg senprkpvnk sknvsnlpfl prswsdefys nwksyllrdd
      121 tverdqvsll pvgsfssgge dgslfkagyl vrvmdclrem keeergelgl vlraftkqnc
      181 ricrvlglwg dlgdgvlyla sekqkrgnfl dknlgcfeke gvfnfalmgm emceavislh
      241 kegliagcls fscfqlddfg hiyldlievl ltgrgiqdvv anvgfsgkki gdgeirmlfk
      301 dllkrdvfvc pevllkllek egtgveccsl kypiryssda wllscillri vngdvfsdew
      361 veymchiivk gsenseidcs svytssmekv ssllgtkfga ecvslqqilc kcldldpesr
      421 slvvdvwkci relvirpqfd kmvklygasy denvgrcmvv gklcllsrer tetqekdelq
      481 gkeangatdm vngltegrik wkdlqghldc vtglavgggy lfsssfdksv kvwslqdysh
      541 vhtfrghehk vmavvcvdee qplcisgdsg ggiflwsini pfgqeplkkw yeekdwrysg
      601 ihalavseng ylytgsgdkl ikewslrdgt lsgtmtghks vvsaiavnng vlysgswdgt
      661 vrlwslsdhs lltvlgedmp ravstvlsla adqhtliaty engsvkiwrh dvlrksmqih
      721 ngaiftvsld gkwlftgswd rtikaqelag ddvevdvrhi gsipcdsvit alsysegklf
      781 vgfgdrtvkv yyhgk
//
LOCUS       XP_016693686             746 aa            linear   PLN 06-AUG-2024
DEFINITION  TAF5-like RNA polymerase II p300/CBP-associated factor-associated
            factor 65 kDa subunit 5L isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693686
VERSION     XP_016693686.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..746
                     /product="TAF5-like RNA polymerase II p300/CBP-associated
                     factor-associated factor 65 kDa subunit 5L isoform X3"
                     /calculated_mol_wt=82890
     Region          7..56
                     /region_name="RING-HC_TRIM32_C-VII"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 32 (TRIM32) and similar proteins;
                     cd16587"
                     /db_xref="CDD:438249"
     Region          <504..744
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          511..546
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          552..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          601..636
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          643..676
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          683..719
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..746
                     /gene="LOC107910373"
                     /coded_by="XM_016838197.2:2078..4318"
                     /db_xref="GeneID:107910373"
ORIGIN      
        1 mesqdlpecp vclqpydgec tiprvlacgh tvcescllnl pkklpgairc pactvlvkyp
       61 pegpttlpkn idllrlipgg senprkpvnk sknvsnlpfl prswsdefys nwksyllrdd
      121 tverdqvsll pvgsfssgge dgslfkagyl vrvmdclrem keeergelgl vlraftkqnc
      181 ricrvlglwg dlgdgvlyla sekqkrgnfl dknlgcfeke gvfnfalmgm emceavislh
      241 kegliagcls fscfqlddfg hiyldlievl ltgrgiqdvv anvgfsgkki gdgeirmlfk
      301 dllkrdvfvc pevllkllek egtgveccsl kypiryssda wllscillri vngdvfsdew
      361 veymchiivk gsenseidcs svytssmekv ssllgtkfga ecvslqqilc kcldldpesr
      421 slvvdvwkci relvirpqfd kmvklygasy denvgrcmvv gklcllsrer tetqekdelq
      481 gkeangatdm vngltegrik wkdlqghldc vtglavgggy lfsssfdksv kvwslqdysh
      541 vhtfrghehk vmavvcvdee qplcisgdsg ggiflwsini pfgqeplkkw yeekdwrysg
      601 ihalavseng ylytgsgdkl ikewslrdgt lsgtmtghks vvsaiavnng vlysgswdgt
      661 vrlwslsdhs lltvlgedmp ravstvlsla adqhtliaty engsvkiwrh dvlrksmqih
      721 ngaiftvsld gkwlftgswd rtikaq
//
LOCUS       XP_040944379             137 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944379
VERSION     XP_040944379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088445.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="tobamovirus multiplication protein 3 isoform X1"
                     /calculated_mol_wt=15841
     Region          1..>137
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..137
                     /gene="LOC107910372"
                     /coded_by="XM_041088445.1:532..945"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp eivqhilldm pslalfttya
       61 llilfwaeiy yqaravstdr lrpsffttna vvytiqiamw lilwwkyipl lvilskmffa
      121 glslfaalgf llyggsl
//
LOCUS       XP_040944380             137 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944380
VERSION     XP_040944380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088446.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="tobamovirus multiplication protein 3 isoform X1"
                     /calculated_mol_wt=15841
     Region          1..>137
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..137
                     /gene="LOC107910372"
                     /coded_by="XM_041088446.1:567..980"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp eivqhilldm pslalfttya
       61 llilfwaeiy yqaravstdr lrpsffttna vvytiqiamw lilwwkyipl lvilskmffa
      121 glslfaalgf llyggsl
//
LOCUS       XP_040944381             137 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944381
VERSION     XP_040944381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088447.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="tobamovirus multiplication protein 3 isoform X2"
                     /calculated_mol_wt=15841
     Region          1..>137
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..137
                     /gene="LOC107910372"
                     /coded_by="XM_041088447.1:535..948"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp eivqhilldm pslalfttya
       61 llilfwaeiy yqaravstdr lrpsffttna vvytiqiamw lilwwkyipl lvilskmffa
      121 glslfaalgf llyggsl
//
LOCUS       XP_040944382             137 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944382
VERSION     XP_040944382.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088448.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="tobamovirus multiplication protein 3 isoform X1"
                     /calculated_mol_wt=15841
     Region          1..>137
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..137
                     /gene="LOC107910372"
                     /coded_by="XM_041088448.1:426..839"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp eivqhilldm pslalfttya
       61 llilfwaeiy yqaravstdr lrpsffttna vvytiqiamw lilwwkyipl lvilskmffa
      121 glslfaalgf llyggsl
//
LOCUS       XP_040944383             137 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944383
VERSION     XP_040944383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088449.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="tobamovirus multiplication protein 3 isoform X2"
                     /calculated_mol_wt=15841
     Region          1..>137
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..137
                     /gene="LOC107910372"
                     /coded_by="XM_041088449.1:519..932"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp eivqhilldm pslalfttya
       61 llilfwaeiy yqaravstdr lrpsffttna vvytiqiamw lilwwkyipl lvilskmffa
      121 glslfaalgf llyggsl
//
LOCUS       XP_040944384             113 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944384
VERSION     XP_040944384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088450.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..113
                     /product="tobamovirus multiplication protein 3 isoform X3"
                     /calculated_mol_wt=13145
     Region          1..>113
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..113
                     /gene="LOC107910372"
                     /coded_by="XM_041088450.1:535..876"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp eivqhilldm pslalfttya
       61 llilfwaeiy yqiamwlilw wkyipllvil skmffaglsl faalgfllyg gsl
//
LOCUS       XP_040944385             106 aa            linear   PLN 06-AUG-2024
DEFINITION  tobamovirus multiplication protein 3 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040944385
VERSION     XP_040944385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088451.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..106
                     /product="tobamovirus multiplication protein 3 isoform X4"
                     /calculated_mol_wt=12159
     Region          1..>106
                     /region_name="THH1_TOM1-3_dom"
                     /note="THH1/TOM1/TOM3 domain; pfam06454"
                     /db_xref="CDD:399452"
     CDS             1..106
                     /gene="LOC107910372"
                     /coded_by="XM_041088451.1:519..839"
                     /db_xref="GeneID:107910372"
ORIGIN      
        1 mrvpeygwtt qkvfhflnfl vngvralvfv frrsvqnlhp earavstdrl rpsffttnav
       61 vytiqiamwl ilwwkyipll vilskmffag lslfaalgfl lyggsl
//
LOCUS       XP_016693688             619 aa            linear   PLN 06-AUG-2024
DEFINITION  probable receptor-like protein kinase At1g11050 [Gossypium
            hirsutum].
ACCESSION   XP_016693688
VERSION     XP_016693688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..619
                     /product="probable receptor-like protein kinase At1g11050"
                     /calculated_mol_wt=68600
     Region          30..185
                     /region_name="SPARK"
                     /note="pfam19160"
                     /db_xref="CDD:465984"
     Region          307..577
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(307..311,315,327,329,358,379..382,386,388,431,433,
                     435..436,438,449,452,469..472)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(307..311,315,327,329,358,379..382,386,431,433,
                     435..436,438,449)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(311,386,388,431,433,435,452,469..472)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(448..455,465..472)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..619
                     /gene="LOC107910374"
                     /coded_by="XM_016838199.2:186..2045"
                     /db_xref="GeneID:107910374"
ORIGIN      
        1 mgnylfffff ffffffiiip lfsstsaids ndsscpidls yvetfpwnqt tcldpqgnqc
       61 cqtlislfgm gmaqylkets vfqlpnptva ssclsgfqtq vaarsvhpsl vtscfknstq
      121 fvsnvsncag iitvqdwvqk vgpvtaldta ckgdvtglnc rpcieagynv fsklfsldpn
      181 stkcfdftvl yaigvinefg pkdpgaagci lglpldssvn ekskrklsne tvlklvfgfl
      241 gafvgvlvaf aliilyrkwd kknkrnaphr rfvssfrasv lpnsgakwfh lseleratdg
      301 fsqrnligrg aygvvykgtl adgtlvavkq ildldlegde dfsneveiis kirhrnllsl
      361 rgccvtsdim kgrrrylvyd fmsngslgdh lfndftrqkl swpqrkniil dvaqglaylh
      421 ygikpsiyhr dikatnilld semkakvadf glakqslegq shlttrvagt hgylapeyal
      481 ygqlteksdv ysfgivilei msgrkvidts nssylmitdw awklaksgnv qeifdesire
      541 egpkgvmerf vrvgilcahv mvafrpkiae alkmlegdid ipklpdrplp lshesfkssl
      601 griastsnas kynsnmslv
//
LOCUS       XP_016693689             738 aa            linear   PLN 06-AUG-2024
DEFINITION  SWI/SNF complex subunit SWI3C [Gossypium hirsutum].
ACCESSION   XP_016693689
VERSION     XP_016693689.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..738
                     /product="SWI/SNF complex subunit SWI3C"
                     /calculated_mol_wt=80796
     Region          73..>187
                     /region_name="Herpes_gE_N"
                     /note="Alphaherpesvirus glycoprotein E N-terminal;
                     cl46909"
                     /db_xref="CDD:481249"
     Region          166..598
                     /region_name="RSC8"
                     /note="RSC chromatin remodeling complex subunit RSC8
                     [Chromatin structure and dynamics / Transcription];
                     COG5259"
                     /db_xref="CDD:227584"
     CDS             1..738
                     /gene="LOC107910375"
                     /coded_by="XM_016838200.2:292..2508"
                     /db_xref="GeneID:107910375"
ORIGIN      
        1 mpasssdgrg rwkrrkrerr lkhqveekdv vpeeddeeen nddldnsgdd aagvatdpsl
       61 pgssesevls gggfrisefp pvvkrtvnrp hgsvmaivas eragligdgk ghqqvelavl
      121 envshgqiqs vsmeapvvdp ekyvitpppi megrgvvkrf gsrvhvlpmh sewfspatvh
      181 rlerqvvplf fsgkspehtp eryiecrnqi vvkymdnpgk ritvsdcqgl vnginnedlt
      241 rifrfldhwg iinycaaaps hepwkvgsyl reesngevhv psaalksids likfdkpkcr
      301 lkaadvyspl scndndvsdl dnrirerlse nycsscsqpi ptsyyqsqke vdtllcsdcf
      361 hdgrffsghs sidfvrvesk dygdldgesw sdqetlmlle aleiynenwn eiaehvgtks
      421 kaqcilhflr lpmeeglled mevpgmpksm ivsngdgrgi lhsnmngslt gpnlqdadse
      481 srlpfansgn pvmamvafla savgprvaaa cahaslaals egensatngs vgqneaevhp
      541 lppektkaaa kaglaaaamk aklfadheer eiqrlsanii nhqlkrmelk lkqfaevetl
      601 lmkecdqvek trqrfaaera rivstrfspv gvtsqmslpg vassmannni snnrqqvist
      661 spshpqpsvs gyggnqpvnp hvpfmqrqpm fpmgprlplt amqastsgsp nvmfnspgnt
      721 qptinhplmr sasgtssg
//
LOCUS       XP_040944386             713 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944386
VERSION     XP_040944386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088452.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..713
                     /product="uncharacterized protein"
                     /calculated_mol_wt=78884
     Region          169..>588
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          <398..663
                     /region_name="Pectate_lyase22"
                     /note="Oligogalacturonate lyase; cl44632"
                     /db_xref="CDD:457977"
     CDS             1..713
                     /gene="LOC107910376"
                     /coded_by="XM_041088452.1:215..2356"
                     /db_xref="GeneID:107910376"
ORIGIN      
        1 mkpqslciff llhffallct aaseheapgt ggtivfttlg rsnyawdiyt lptsdppsps
       61 nelrvtdges vnfnghfpst spssvlsllh nrslirtpgp qappplqlvy vterngmpni
      121 yydalyygap gstrsrsale vpvrlqapll gleesknrvs mkdrpslsge nliyvsthed
      181 pgeprtswaa vysthlgtgl trrltpsgia dfspavspsg vwtavasygk egwggeveel
      241 stdiyvfltr dgthrvkvve hggwpcwvdd stlyfhrrse dqwisvykat fpkdkpvste
      301 lvtiqrvtpp glhaftpats pgnhkfvava trrpnssfrh ielfdtvkne fteltrhvsp
      361 tthhlnpfis pdsarvgyhk crgesngaka tqlllenvks pvpnlslfrm ygsfpsfspa
      421 gdriayvdfp gvyvvnrdgs nlrqvfhlna fgsawdpvrk givytsagpe fssvstevdi
      481 vsinvddveq snyrrltidg knnafpspsp dgkrivfrsg rsghknlyim daiegetswi
      541 erltdgpwtd tmcnwspdgd wiafssdrhd pgsgsfelym ihpngtglrr llrsgssgrv
      601 nhpsfrpdgk llvfttdygg isaepisnph hyqpygeift mkldgsdlkr lthnsyedgt
      661 ptwaplyinp vdvewprkge cafedchwln empgrgiklv gpwglakpqc gvf
//
LOCUS       XP_016693691             204 aa            linear   PLN 06-AUG-2024
DEFINITION  proteasome subunit beta type-3-A [Gossypium hirsutum].
ACCESSION   XP_016693691
VERSION     XP_016693691.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838202.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="proteasome subunit beta type-3-A"
                     /calculated_mol_wt=22760
     Region          6..200
                     /region_name="proteasome_beta_type_3"
                     /note="proteasome beta type-3 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03759"
                     /db_xref="CDD:239728"
     Site            order(9,25,27,41,140,177,180..181)
                     /site_type="active"
                     /db_xref="CDD:239728"
     Site            order(27,30,32..37,57,59,74,86,89..90,92..93,96,99,124,
                     126,128..131,135,143..144,146..147,150..152,168,175..178,
                     181..182)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239728"
     CDS             1..204
                     /gene="LOC107910378"
                     /coded_by="XM_016838202.2:265..879"
                     /db_xref="GeneID:107910378"
ORIGIN      
        1 msifeyngsa liamvgkncf aiasdrrlgv qlqtiatdfq riykvhdrlf lglsglatda
       61 qtlyqrlvfr hklyqlreer dmkpetfanl vsailyekrf gpyfcqpvia glgdedkpfi
      121 ctmdsigake lakdfvvagt aseslygace smfkegmepe elfetvsqal lssvdrdcls
      181 gwgghvyvvt ptevkerilk grmd
//
LOCUS       XP_016693693             462 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase Asp1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693693
VERSION     XP_016693693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838204.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="aspartic proteinase Asp1 isoform X1"
                     /calculated_mol_wt=50693
     Region          65..414
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(85,87,89,146..148,199)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133142"
     Site            85..87
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133142"
     Site            85
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133142"
     Site            order(146..149,153..156)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133142"
     CDS             1..462
                     /gene="LOC107910380"
                     /coded_by="XM_016838204.2:207..1595"
                     /db_xref="GeneID:107910380"
ORIGIN      
        1 mdvkkskatv almmmfmmlf lvnfpgcfsa asqqpnnkks thlkphngfh ssflfpvtgn
       61 vyplgyysis lsignppkvf efdidtgsdl twvqcdapct gctkpidhly kpqkhilvsc
      121 ehpscgvvhf pesphcekpd dqcdfeidyv dhgsvlgvvv advfslrfmn gslihlpltf
      181 gcaydlknpg pydppaagvl glsngkasil sqlrsfdltr nvlghclsgk gggflflgdd
      241 lvpsgmswmp vsanskhyls spaevffdgk ptgikdlkvv fdsgssytyf gfqvyegvlt
      301 lvrkgltkkp ldtvqdkalp icwkgtkpfk svhdvknyfs tltlkfkdtq niqlelqpea
      361 ylivtedgna cfgilngtea glgdlnvigd isligkmvvy dnekqrigwi sadcnrlpns
      421 ldgnykediq qpyaanfgil eenhpktqgs sesnvrvrnr el
//
LOCUS       XP_016693694             460 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase Asp1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693694
VERSION     XP_016693694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..460
                     /product="aspartic proteinase Asp1 isoform X2"
                     /calculated_mol_wt=50492
     Region          65..414
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(85,87,89,146..148,199)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133142"
     Site            85..87
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133142"
     Site            85
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133142"
     Site            order(146..149,153..156)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133142"
     CDS             1..460
                     /gene="LOC107910380"
                     /coded_by="XM_016838205.2:196..1578"
                     /db_xref="GeneID:107910380"
ORIGIN      
        1 mdvkkskatv almmmfmmlf lvnfpgcfsa asqqpnnkks thlkphngfh ssflfpvtgn
       61 vyplgyysis lsignppkvf efdidtgsdl twvqcdapct gctkpidhly kpqkhilvsc
      121 ehpscgvvhf pesphcekpd dqcdfeidyv dhgsvlgvvv advfslrfmn gslihlpltf
      181 gcaydlknpg pydppaagvl glsngkasil sqlrsfdltr nvlghclsgk gggflflgdd
      241 lvpsgmswmp vsanskhyls spaevffdgk ptgikdlkvv fdsgssytyf gfqvyegvlt
      301 lvrkgltkkp ldtvqdkalp icwkgtkpfk svhdvknyfs tltlkfkdtq niqlelqpea
      361 ylivtedgna cfgilngtea glgdlnvigd isligkmvvy dnekqrigwi sadcnrlpld
      421 gnykediqqp yaanfgilee nhpktqgsse snvrvrnrel
//
LOCUS       XP_016693695             428 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase Asp1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693695
VERSION     XP_016693695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838206.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..428
                     /product="aspartic proteinase Asp1 isoform X1"
                     /calculated_mol_wt=46445
     Region          69..421
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(89,91,93,150..152,204)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133142"
     Site            89..91
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133142"
     Site            89
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133142"
     Site            order(150..153,157..160)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133142"
     CDS             1..428
                     /gene="LOC107910382"
                     /coded_by="XM_016838206.2:346..1632"
                     /db_xref="GeneID:107910382"
ORIGIN      
        1 madqkmkerr rvslmimvli fqvlsaslhg claaigqgqp prkptsihpr agfrssvflp
       61 vsgnvyplgy ysvtidignp pkpfqldidt gsdltwvqcd apctgctlpr dqlynpsknn
      121 fvdckdpicl avnspnppqc knpnekccfq vqyadhgsvl gfivsdtfpl rlvngtlskp
      181 hlafgcghcl qnrglhpptp tagvlglgks kasissqlss mgvtknvfgh clgdnrgflf
      241 fgadfvpksg mtwtrmlqss sdkhyssgpa ellfggkptg ikgvnvifdt gstytylnlk
      301 vyetvlnlir kdlsgkqlhd vkdkalpicw kgtkpfksmr darnyfstfa lsftgssnvq
      361 lqlppenyli vteqgnvclg ilngaeaglg ttnvigdisl qgklviydne nqmigwanad
      421 cnrkfgsf
//
LOCUS       XP_016693696             409 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase Asp1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693696
VERSION     XP_016693696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838207.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..409
                     /product="aspartic proteinase Asp1 isoform X2"
                     /calculated_mol_wt=44082
     Region          50..402
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(70,72,74,131..133,185)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133142"
     Site            70..72
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133142"
     Site            70
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133142"
     Site            order(131..134,138..141)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133142"
     CDS             1..409
                     /gene="LOC107910382"
                     /coded_by="XM_016838207.2:227..1456"
                     /db_xref="GeneID:107910382"
ORIGIN      
        1 mvlvlsaslh gclaaigqgq pprkptsihp ragfrssvfl pvsgnvyplg yysvtidign
       61 ppkpfqldid tgsdltwvqc dapctgctlp rdqlynpskn nfvdckdpic lavnspnppq
      121 cknpnekccf qvqyadhgsv lgfivsdtfp lrlvngtlsk phlafgcghc lqnrglhppt
      181 ptagvlglgk skasissqls smgvtknvfg hclgdnrgfl ffgadfvpks gmtwtrmlqs
      241 ssdkhyssgp aellfggkpt gikgvnvifd tgstytylnl kvyetvlnli rkdlsgkqlh
      301 dvkdkalpic wkgtkpfksm rdarnyfstf alsftgssnv qlqlppenyl ivteqgnvcl
      361 gilngaeagl gttnvigdis lqgklviydn enqmigwana dcnrkfgsf
//
LOCUS       XP_016693697             407 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartic proteinase Asp1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693697
VERSION     XP_016693697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..407
                     /product="aspartic proteinase Asp1 isoform X3"
                     /calculated_mol_wt=43869
     Region          48..400
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(68,70,72,129..131,183)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133142"
     Site            68..70
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133142"
     Site            68
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133142"
     Site            order(129..132,136..139)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133142"
     CDS             1..407
                     /gene="LOC107910382"
                     /coded_by="XM_016838208.2:227..1450"
                     /db_xref="GeneID:107910382"
ORIGIN      
        1 mvlsaslhgc laaigqgqpp rkptsihpra gfrssvflpv sgnvyplgyy svtidignpp
       61 kpfqldidtg sdltwvqcda pctgctlprd qlynpsknnf vdckdpicla vnspnppqck
      121 npnekccfqv qyadhgsvlg fivsdtfplr lvngtlskph lafgcghclq nrglhpptpt
      181 agvlglgksk asissqlssm gvtknvfghc lgdnrgflff gadfvpksgm twtrmlqsss
      241 dkhyssgpae llfggkptgi kgvnvifdtg stytylnlkv yetvlnlirk dlsgkqlhdv
      301 kdkalpicwk gtkpfksmrd arnyfstfal sftgssnvql qlppenyliv teqgnvclgi
      361 lngaeaglgt tnvigdislq gklviydnen qmigwanadc nrkfgsf
//
LOCUS       XP_016693699             490 aa            linear   PLN 06-AUG-2024
DEFINITION  aldehyde dehydrogenase family 3 member H1 [Gossypium hirsutum].
ACCESSION   XP_016693699
VERSION     XP_016693699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="aldehyde dehydrogenase family 3 member H1"
                     /calculated_mol_wt=53806
     Region          16..447
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(123..127,135,150,152..153,198..201,204,207..208,
                     222..224,257,351,353,379,419)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143455"
     Site            order(127,222,254,257)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143455"
     CDS             1..490
                     /gene="LOC107910383"
                     /coded_by="XM_016838210.2:228..1700"
                     /db_xref="GeneID:107910383"
ORIGIN      
        1 mtsevenkpv fctesakelv kelrasfatg ktksyewrlt qlnamvkmme ekepqivaal
       61 hddlskpele ssiyeiamlk nscrlavknm khwmmpekak tslvtfpssa eivseplgvv
      121 lvistwnypf llsldpivga iaagnaivlk pseiapatsl llarlvaeyl dsscikvveg
      181 avpetaalle qkwdkilytg ngrvarivma aaakhltpvv melggkcpvi vdsdinlqva
      241 trriiagkwg cnngqacisp dyiitmkdya qklidsfkye lerfygknpl eskdlsrivn
      301 snhfarlskl ldedkvsski vhggerdken lkitptilld vprdslimne eifgpllpvf
      361 lvdkvedsfd vinsgtkpla aylftnkkkl kekfvatvsa gglvindttv hlaeptlpfg
      421 gvgdsgmgay hgkfsfdafs hkkavlyrgf acdafvrypp ytrgklgllr alfdgsilgi
      481 irallgwska
//
LOCUS       XP_016691025             193 aa            linear   PLN 06-AUG-2024
DEFINITION  protein disulfide-isomerase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016691025
VERSION     XP_016691025.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835536.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="protein disulfide-isomerase isoform X1"
                     /calculated_mol_wt=22140
     Region          30..>176
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..193
                     /gene="LOC107908354"
                     /coded_by="XM_016835536.2:81..662"
                     /db_xref="GeneID:107908354"
ORIGIN      
        1 marnffvwfa laailcslta isakvseske fvltldhsnf trfltqhnfv vvkfyapwcr
       61 hsqnlapeye kaasvlsnhh ppiilakfda ddeankylak qyrirgyptv kifrnggqli
      121 qeyrdsrrad yiveylkeqi spasveiksa edasgiipqn kitilfytrd llsglycgsy
      181 revfwrgirt lmv
//
LOCUS       XP_016691026             181 aa            linear   PLN 06-AUG-2024
DEFINITION  protein disulfide-isomerase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016691026
VERSION     XP_016691026.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835537.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="protein disulfide-isomerase isoform X2"
                     /calculated_mol_wt=20509
     Region          30..>164
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..181
                     /gene="LOC107908354"
                     /coded_by="XM_016835537.2:80..625"
                     /db_xref="GeneID:107908354"
ORIGIN      
        1 marnffvwfa laailcslta isakvseske fvltldhsnf trfltqhnfv vvkfyapwcr
       61 hsqnlapeye kaasvlsnhh ppiilakfda ddeankylak qyrirgyptv kifrnggqli
      121 qeyrdsrrad yiveylkeqi spasveiksa edasgiipqn kitidftvea iekffgealg
      181 l
//
LOCUS       XP_016693700             326 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g21780 [Gossypium hirsutum].
ACCESSION   XP_016693700
VERSION     XP_016693700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="BTB/POZ domain-containing protein At1g21780"
                     /calculated_mol_wt=37895
     Region          15..>101
                     /region_name="MATH"
                     /note="MATH (meprin and TRAF-C homology) domain; an
                     independent folding unit with an eight-stranded
                     beta-sandwich structure found in meprins, TRAFs and other
                     proteins. Meprins comprise a class of extracellular
                     metalloproteases which are anchored to the membrane...;
                     cd00121"
                     /db_xref="CDD:238068"
     Site            order(49,97..99)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:238068"
     Region          154..259
                     /region_name="BTB"
                     /note="BTB/POZ domain; pfam00651"
                     /db_xref="CDD:395526"
     CDS             1..326
                     /gene="LOC107910385"
                     /coded_by="XM_016838211.2:151..1131"
                     /db_xref="GeneID:107910385"
ORIGIN      
        1 mgdskvetis rlaqwridnf spcsykksdp fkvglwnwhl sieknrymyi rlfpepsrvs
       61 keqppyakfi lrisnvganr rlyispvhdr plrtcddfyw pvdssfhgrf iidvefldlr
      121 icpinggetv siwpmdgaiq smstqttlrc larmldeglh advtiktaeg tlrahkavls
      181 asspvfesmf hhnlkekess tihiddmsle scrallnyly gtinqedfwk hrlpllgaan
      241 kydivdlkda ceeslledin sqnvlerlqe awlyqltklk kgcmtylfdf gkiydvrdei
      301 nnffrqadre lmldmfqevl tvwklv
//
LOCUS       XP_016690793             372 aa            linear   PLN 06-AUG-2024
DEFINITION  esterase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016690793
VERSION     XP_016690793.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835304.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690793.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..372
                     /product="esterase isoform X1"
                     /calculated_mol_wt=40892
     Region          25..358
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(33,103,169,338,341)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(33,338,341)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(33,103,169)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..372
                     /gene="LOC107908023"
                     /coded_by="XM_016835304.2:121..1239"
                     /db_xref="GeneID:107908023"
ORIGIN      
        1 mslflfmllv silnpvvshk scdfpavfnl gdsnsdtggy asafttptsp ygdtyfhmpa
       61 rrfsdgrlii dfiaeafglp finayldsvg tnfshginfa taastirlpi svipngvfsp
      121 fylgfqysqf eqfkvrsqmi rkqggllagl mpkeeyfska lytfdigqnd laegffpnlt
      181 iqevnasipd iinkfsenik niynlgarff wvhntgpigc lpyvlvafas aekdpagclk
      241 pynevaqyfn lklqesiaql rnefpsaaft yvdiysvkys lfaeppkhgf elplvtccgy
      301 ggeynysasv lcggtitvng teifvgscdn ppvrvvwdgi hfteaankfi fdqistgsfs
      361 dpavplkqac qs
//
LOCUS       XP_040944388             343 aa            linear   PLN 06-AUG-2024
DEFINITION  esterase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944388
VERSION     XP_040944388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088454.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..343
                     /product="esterase isoform X2"
                     /calculated_mol_wt=37747
     Region          25..329
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(33,103,309,312)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(33,309,312)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     CDS             1..343
                     /gene="LOC107908023"
                     /coded_by="XM_041088454.1:119..1150"
                     /db_xref="GeneID:107908023"
ORIGIN      
        1 mslflfmllv silnpvvshk scdfpavfnl gdsnsdtggy asafttptsp ygdtyfhmpa
       61 rrfsdgrlii dfiaeafglp finayldsvg tnfshginfa taastirlpi svipngvfsp
      121 fylgfqysqf eqfkvrsqmi rkqegffpnl tiqevnasip diinkfseni kniynlgarf
      181 fwvhntgpig clpyvlvafa saekdpagcl kpynevaqyf nlklqesiaq lrnefpsaaf
      241 tyvdiysvky slfaeppkhg felplvtccg yggeynysas vlcggtitvn gteifvgscd
      301 nppvrvvwdg ihfteaankf ifdqistgsf sdpavplkqa cqs
//
LOCUS       XP_016693701             372 aa            linear   PLN 06-AUG-2024
DEFINITION  esterase [Gossypium hirsutum].
ACCESSION   XP_016693701
VERSION     XP_016693701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838212.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..372
                     /product="esterase"
                     /calculated_mol_wt=40657
     Region          25..358
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(33,103,169,338,341)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(33,338,341)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(33,103,169)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..372
                     /gene="LOC107910386"
                     /coded_by="XM_016838212.2:147..1265"
                     /db_xref="GeneID:107910386"
ORIGIN      
        1 mslflfmllv silnpvvshk scdfpavvnl gdsnsdtggy asaftppasp ygetyfhmpa
       61 rrfsdgrlti dfiaeafglp finayldsvg tnfshginfa taastirlpi svipnggfsp
      121 fylglqysqf eqfkvrsqmi rkqggllasl mpkeeyfska lytfdigqnd lgegffsnlt
      181 iqevnasipd iinkfsanik niynlgarff wvhntgpigc lpyvlvafas aekdpagclk
      241 pynevaqyfn lklqesiaql rnefpsaaft yvdiysvkys lfaeppkhgf elplvtccgy
      301 ggeynysaav lcggtitvng teifvgscdn psvrvvwdgi hfteaankfi fdqistgsfs
      361 dpavplkqac qs
//
LOCUS       XP_016693702             217 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693702
VERSION     XP_016693702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24171
     CDS             1..217
                     /gene="LOC107910387"
                     /coded_by="XM_016838213.2:113..766"
                     /db_xref="GeneID:107910387"
ORIGIN      
        1 mngykdgsys cyfhpkqqvi gvcplclndr llllaskqpr hsssssssst rgshgfiqgf
       61 slkkppinkl pkiialgsll nrlefkhwkp gnsdddvldv stgqedsfis ikfeengvgs
      121 wengkvskgs iehcskswnp tltkgitnep kvtnktvieh akprallkwr krighlshli
      181 kwkrsskanv rhmgskvngi nlmgkgwirt ltkrtke
//
LOCUS       XP_016693703             341 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-galactose transporter 1 [Gossypium hirsutum].
ACCESSION   XP_016693703
VERSION     XP_016693703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..341
                     /product="UDP-galactose transporter 1"
                     /calculated_mol_wt=38271
     Region          21..302
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; cl26744"
                     /db_xref="CDD:474852"
     CDS             1..341
                     /gene="LOC107910388"
                     /coded_by="XM_016838214.2:494..1519"
                     /db_xref="GeneID:107910388"
ORIGIN      
        1 meegrflqwg vfrsllailq wwgfnvtvii mnkwifqkld fkfplsvscv hficssigay
       61 lvikvlklkp liavdpegrw krifpmsfvf cinivlgnvs lryipvsfmq tiksftpatt
      121 vflqwlvwrk yfdrriwasl vpivggillt svtelsfnml gfcaalfgcl atstktilae
      181 sllhgykfds intvyymapf atmilgvpal llegngvmdw fhahpapwas liiifssgvl
      241 afclnfsify vihsttavtf nvagnlkvav avliswlifr npisglnavg cgitllgctf
      301 ygyvrhmlsq qtpgtprtpr tprkkmellp lvnneklddk v
//
LOCUS       XP_040944390             226 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944390
VERSION     XP_040944390.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088456.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..226
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24649
     Region          68..177
                     /region_name="USP-like"
                     /note="universal stress protein (USP) and similar
                     proteins; cd00293"
                     /db_xref="CDD:467483"
     CDS             1..226
                     /gene="LOC121214621"
                     /coded_by="XM_041088456.1:90..770"
                     /db_xref="GeneID:121214621"
ORIGIN      
        1 massssffrq lsgkqgwksk slrwgvnnkn nicggcetsl kahqmegldm ygnggagsgd
       61 dglvlrkrvm vlvdksshsr hammwalthv ankgdlltll hvipptpncs hspssftyla
      121 nslgslckac kpeveveali iqgpklwtvk sqvkklgvsv lvvgqrrqsp lltlclggsr
      181 qndefveqci ktidrhclti gvrrqsnglg gylittrwln nfwlla
//
LOCUS       XP_040944391             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944391
VERSION     XP_040944391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088457.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31194
     Region          14..101
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..274
                     /gene="LOC121214622"
                     /coded_by="XM_041088457.1:534..1358"
                     /db_xref="GeneID:121214622"
ORIGIN      
        1 mgkgnkegts kqfrwtkpme hvfleilaee aqkgnkpsnt fkavsinrvv eaiserfkvq
       61 cdakhvenhl rtvknqwqii ckirgesgfg wddnmkmitc dratydaavm ahkqyepffn
      121 ksidhydemd lvvgkdmatg sfakifadid lddgnqdsvl vdcdneeaee vrtnvsssgt
      181 skrkrkivqe svvdeqikfv seqlgkiasa leqftadktp qlyeqvmsme eegfdddflc
      241 svfdylmshe seakaflvks kkhkkiwlqk fsqg
//
LOCUS       XP_040944392             274 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944392
VERSION     XP_040944392.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088458.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..274
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31194
     Region          14..101
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..274
                     /gene="LOC121214622"
                     /coded_by="XM_041088458.1:330..1154"
                     /db_xref="GeneID:121214622"
ORIGIN      
        1 mgkgnkegts kqfrwtkpme hvfleilaee aqkgnkpsnt fkavsinrvv eaiserfkvq
       61 cdakhvenhl rtvknqwqii ckirgesgfg wddnmkmitc dratydaavm ahkqyepffn
      121 ksidhydemd lvvgkdmatg sfakifadid lddgnqdsvl vdcdneeaee vrtnvsssgt
      181 skrkrkivqe svvdeqikfv seqlgkiasa leqftadktp qlyeqvmsme eegfdddflc
      241 svfdylmshe seakaflvks kkhkkiwlqk fsqg
//
LOCUS       XP_016693706             387 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At4g08300 [Gossypium hirsutum].
ACCESSION   XP_016693706
VERSION     XP_016693706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838217.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..387
                     /product="WAT1-related protein At4g08300"
                     /calculated_mol_wt=42024
     Region          22..338
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..387
                     /gene="LOC107910392"
                     /coded_by="XM_016838217.2:391..1554"
                     /db_xref="GeneID:107910392"
ORIGIN      
        1 mggrstfaal fnglntmkpy lamvslqfgy agmyivsmvc lkqgmsnfil atyrhvvati
       61 viapfaivle rkirpkmtlp vflrivalgf lepvldqnfy ylgmklttat yssafvnmlp
      121 avtfilamif rlekvnvkki rslakiigta itvigamvmt lykgpiidfi ksggavhqgt
      181 atksedkhwv tgtilllgsi cswagffilq sftlkkypae lsltawicfm gmiedaivsl
      241 imvrdlsawk lgwdsrllaa sysgivnsgi ayyvqgvvir qrgpvfvtsf splcmiitai
      301 lgaiilaeki hlgsilgaii ivtglytvvw gkskdgenpe tdvkcnglqe lpitgnaksi
      361 tdddddingp tkivtipvsn tpftqgt
//
LOCUS       XP_040944393             320 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl-tRNA synthetase associated domain-containing protein 1
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944393
VERSION     XP_040944393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088459.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..320
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=34647
     Region          5..162
                     /region_name="PrdX_deacylase"
                     /note="This CD includes bacterial (Agrobacterium
                     tumefaciens and Caulobacter crescentus ProX, and
                     Clostridium sticklandii PrdX) and eukaryotic (Plasmodium
                     falciparum N-terminal ProRS editing domain) sequences. The
                     C. sticklandii PrdX protein, a homolog of the...; cd04335"
                     /db_xref="CDD:239827"
     Site            order(46,101..102,133)
                     /site_type="active"
                     /note="putative deacylase active site [active]"
                     /db_xref="CDD:239827"
     CDS             1..320
                     /gene="LOC107908025"
                     /coded_by="XM_041088459.1:116..1078"
                     /db_xref="GeneID:107908025"
ORIGIN      
        1 mvyskdqlla rlkelqidfs qyehpvvltv eaqakyvgnv ggalsknlfl kdkkhryyvv
       61 saladtkvdm kvlsqrlglg kgglrmapee algeilkvpl gcvtpfalvn esashvslll
      121 dkgfktqecc ifhplsndms islnafgldk flksigrdpt yidleanppv gkdqppdras
      181 lvpsgstvlp dlpektpsqd ssgnhpsagn nstavtakad kpsnavqnvk eksvngvrpl
      241 ipstdagkfv eelldrtstl llseisedsi krhggqlgae vannikkclr edlknlatif
      301 kntaytegfy agthyqpkrl
//
LOCUS       XP_040944394             307 aa            linear   PLN 06-AUG-2024
DEFINITION  proline--tRNA ligase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944394
VERSION     XP_040944394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088460.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="proline--tRNA ligase isoform X2"
                     /calculated_mol_wt=33067
     Region          5..149
                     /region_name="PrdX_deacylase"
                     /note="This CD includes bacterial (Agrobacterium
                     tumefaciens and Caulobacter crescentus ProX, and
                     Clostridium sticklandii PrdX) and eukaryotic (Plasmodium
                     falciparum N-terminal ProRS editing domain) sequences. The
                     C. sticklandii PrdX protein, a homolog of the...; cd04335"
                     /db_xref="CDD:239827"
     Site            order(46,88..89,120)
                     /site_type="active"
                     /note="putative deacylase active site [active]"
                     /db_xref="CDD:239827"
     CDS             1..307
                     /gene="LOC107908025"
                     /coded_by="XM_041088460.1:117..1040"
                     /db_xref="GeneID:107908025"
ORIGIN      
        1 mvyskdqlla rlkelqidfs qyehpvvltv eaqakyvgnv ggalsknlfl kdkkhscavl
       61 sqrlglgkgg lrmapeealg eilkvplgcv tpfalvnesa shvsllldkg fktqeccifh
      121 plsndmsisl nafgldkflk sigrdptyid leanppvgkd qppdraslvp sgstvlpdlp
      181 ektpsqdssg nhpsagnnst avtakadkps navqnvkeks vngvrplips tdagkfveel
      241 ldrtstllls eisedsikrh ggqlgaevan nikkclredl knlatifknt aytegfyagt
      301 hyqpkrl
//
LOCUS       XP_040944395             478 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944395
VERSION     XP_040944395.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088461.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..478
                     /product="uncharacterized protein"
                     /calculated_mol_wt=54956
     Region          25..57
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     CDS             1..478
                     /gene="LOC121214623"
                     /coded_by="XM_041088461.1:1..1437"
                     /db_xref="GeneID:121214623"
ORIGIN      
        1 msqtqpgerv ngangsapgr nyklywcyqc rqsvrivstn pseiicprcs gqfvcemeid
       61 rprmvvdlta sdpspearlf ealslimdpl irvsnrirdc snnqepvswp llghrllgpe
      121 svnnpleslq rrrshsfdgn eirepaqrfd nqeplgwpll rsrllgvesv nnpfehrrky
      181 rshsshgsei reqehvqrsn nqeplgwpff rlhflehcqr rrshsydrne iqepsgwpfl
      241 rrhflgaesi snppehrqrc rrhgsngnev qeslgrpflr rhflgaesvn nplehrqrcn
      301 frssgqnenq epfgwpllrh hflgagsvsn pfehrgrhrs lssdeneire qefeathrpr
      361 twiilrpagp ygpsiaersl rqanlvqpsi dprnfffgpa lddlidqitq ndrpgvppap
      421 estintiptv kiiemhlidn lqcpicnvqf arrnsllvek qgsclvnist tmtafflg
//
LOCUS       XP_040944396             469 aa            linear   PLN 06-AUG-2024
DEFINITION  probable N-succinyldiaminopimelate aminotransferase DapC [Gossypium
            hirsutum].
ACCESSION   XP_040944396
VERSION     XP_040944396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088462.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..469
                     /product="probable N-succinyldiaminopimelate
                     aminotransferase DapC"
                     /calculated_mol_wt=52124
     Region          57..468
                     /region_name="PLN00175"
                     /note="aminotransferase family protein; Provisional"
                     /db_xref="CDD:215089"
     CDS             1..469
                     /gene="LOC121214625"
                     /coded_by="XM_041088462.1:184..1593"
                     /db_xref="GeneID:121214625"
ORIGIN      
        1 mqaaectwth femlrplcfk spsttplffn fskhfqkgfs dssffrsnrr isnypsfmat
       61 isslsthkdp vsthdatpni thqpvqvakr lekfkttift qmsmlaikhg ainlgqgfpn
      121 fdgpdfvkea aiqaikdgkn qyargygvpd fnnaiaarfk kdtglvidpe kevtvtsgct
      181 eaiaatmlgl inpgdevilf apfydsyeat lsmagakvkc itlrppdfav pidelkstis
      241 kntrailint phnptgkmft reelntiasl ciendvlvft devydklafe mdhismaslp
      301 gmyeqtvtmn slgktfsltg wkigwaiapp hlawgvrqah sfltfatstp mqyaatvalq
      361 apdsyfaelk rdymakkail vqglkdvgfk vfpssgtyfv vvdhtpfgle ndiafceyli
      421 kevgvvaipt svfylnpddg knlvrftfck deetlrsave rmkeklkkk
//
LOCUS       XP_040944397             469 aa            linear   PLN 06-AUG-2024
DEFINITION  probable N-succinyldiaminopimelate aminotransferase DapC [Gossypium
            hirsutum].
ACCESSION   XP_040944397
VERSION     XP_040944397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088463.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..469
                     /product="probable N-succinyldiaminopimelate
                     aminotransferase DapC"
                     /calculated_mol_wt=52124
     Region          57..468
                     /region_name="PLN00175"
                     /note="aminotransferase family protein; Provisional"
                     /db_xref="CDD:215089"
     CDS             1..469
                     /gene="LOC121214625"
                     /coded_by="XM_041088463.1:184..1593"
                     /db_xref="GeneID:121214625"
ORIGIN      
        1 mqaaectwth femlrplcfk spsttplffn fskhfqkgfs dssffrsnrr isnypsfmat
       61 isslsthkdp vsthdatpni thqpvqvakr lekfkttift qmsmlaikhg ainlgqgfpn
      121 fdgpdfvkea aiqaikdgkn qyargygvpd fnnaiaarfk kdtglvidpe kevtvtsgct
      181 eaiaatmlgl inpgdevilf apfydsyeat lsmagakvkc itlrppdfav pidelkstis
      241 kntrailint phnptgkmft reelntiasl ciendvlvft devydklafe mdhismaslp
      301 gmyeqtvtmn slgktfsltg wkigwaiapp hlawgvrqah sfltfatstp mqyaatvalq
      361 apdsyfaelk rdymakkail vqglkdvgfk vfpssgtyfv vvdhtpfgle ndiafceyli
      421 kevgvvaipt svfylnpddg knlvrftfck deetlrsave rmkeklkkk
//
LOCUS       XP_040944398             103 aa            linear   PLN 06-AUG-2024
DEFINITION  selenoprotein K [Gossypium hirsutum].
ACCESSION   XP_040944398
VERSION     XP_040944398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088464.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..103
                     /product="selenoprotein K"
                     /calculated_mol_wt=10924
     Region          2..>58
                     /region_name="SelK_SelG"
                     /note="Selenoprotein SelK_SelG; pfam10961"
                     /db_xref="CDD:463198"
     CDS             1..103
                     /gene="LOC121214626"
                     /coded_by="XM_041088464.1:166..477"
                     /db_xref="GeneID:121214626"
ORIGIN      
        1 mayvergvvk skrsiwrlrt iidffwaiin figvffstmf smeksdayrk ssgsskkwdg
       61 gpggpgsgpy ggggsprrps rgldnvrgid hsslpacgsc cgg
//
LOCUS       XP_016741999             284 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogenesis-related thaumatin-like protein 3.5 [Gossypium
            hirsutum].
ACCESSION   XP_016741999
VERSION     XP_016741999.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741999.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..284
                     /product="pathogenesis-related thaumatin-like protein 3.5"
                     /calculated_mol_wt=30655
     Region          27..237
                     /region_name="TLP-PA"
                     /note="allergenic/antifungal thaumatin-like proteins:
                     plant and animal homologs; cd09218"
                     /db_xref="CDD:185757"
     Site            order(72,112,122,127,220)
                     /site_type="other"
                     /note="electronegative/electropositive cleft residues"
                     /db_xref="CDD:185757"
     Site            order(188..189,191..200,202..219)
                     /site_type="other"
                     /note="predicted IgE-binding epitope region"
                     /db_xref="CDD:185757"
     CDS             1..284
                     /gene="LOC107951447"
                     /coded_by="XM_016886510.2:85..939"
                     /db_xref="GeneID:107951447"
ORIGIN      
        1 mnpllsplhf tllmlssgpk myecarvfti vnycketiwp gvtpgdnfng ggfelksgqs
       61 vvfqapvgws griwgrtgck fdksgtgscq tadcgntlkc kasgktpasl aeftlsnvdy
      121 ydvslvdgfn lpiavkpmng qgncssagcd kdlrqtcpse lavkggngkv igcrsacdvf
      181 ntdeyccrgt ygnpvicqpt fyskkfkdac ptaysyaydd ptsiftcsgs dyvvtfcssr
      241 nqtvcsyhdh klvcnaangl npwmgscwta mlalllminl riff
//
LOCUS       XP_040944400             100 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944400
VERSION     XP_040944400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088466.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..100
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11108
     CDS             1..100
                     /gene="LOC121214627"
                     /coded_by="XM_041088466.1:216..518"
                     /db_xref="GeneID:121214627"
ORIGIN      
        1 mfsapfstea ldwspilahs pmttkraris ppgtesgtwr vrrpaggaww cymrgewlgs
       61 gasairvfrl lflcwvlgfc nrarvqaflg qlvcnmgwtv
//
LOCUS       XP_040944401              88 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-fold modifier 1 [Gossypium hirsutum].
ACCESSION   XP_040944401
VERSION     XP_040944401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088467.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..88
                     /product="ubiquitin-fold modifier 1"
                     /calculated_mol_wt=9301
     Region          7..81
                     /region_name="Ubl_UFM1"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin fold
                     modifier 1 (UFM1); cd01766"
                     /db_xref="CDD:340465"
     Site            order(22..27,31,34..35,38)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:340465"
     CDS             1..88
                     /gene="LOC107910211"
                     /coded_by="XM_041088467.1:291..557"
                     /db_xref="GeneID:107910211"
ORIGIN      
        1 masggkvsfk vtltsdpklp fkvfsvpeaa pftavlkfaa eefkvrpqts aiitndgvgi
       61 npqqsagnvf lkhgselrli prdrvgaf
//
LOCUS       XP_016693482             482 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHR1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693482
VERSION     XP_016693482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837993.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..482
                     /product="histone-lysine N-methyltransferase ASHR1 isoform
                     X1"
                     /calculated_mol_wt=54678
     Region          19..274
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(22..23,209..214,222..224,245..248)
                     /site_type="active"
                     /db_xref="CDD:380980"
     Site            order(22..23,210..214,247)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380980"
     Region          56..93
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          333..361
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(334,337..338,341..342,344,376,379..380,383..384,
                     386..387,414,421..422,425..426,429)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          366..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          374..448
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          413..445
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..482
                     /gene="LOC107910212"
                     /coded_by="XM_016837993.2:143..1591"
                     /db_xref="GeneID:107910212"
ORIGIN      
        1 meelqaslqp rgltlstfpd kgrsllaard fypgeviisq epyvcvpnns ltesrcdgcf
       61 sksnlkkcsa chvvwycgss cqklewklhr lecqllakld kerrksvtpt irmmvklylr
      121 rklqnenvip vtamdnynlv ealvshmsdi dekqlllyaq manlvnlilq lpnidikeia
      181 enfskfacna hticdselrs lgtglypvis iinhsclpna vlvfegrlav vravqhipkd
      241 sevsisyvet aastitrqkt lkeqylftci cvrcnklgqy ddiqesaile gyrcrdngcs
      301 gfllresdek gfvcqqcgli rnkeeirkia sdikalsdka lkcsssgnlq eaivlyknie
      361 klqkevchpf siilmrtwek lleilmqlee wkealaicrl tipvyervyp gfhpllglqy
      421 yscgklewll getddaiksf tkavdilrit hgtstpfmke llmkleearv easfklssre
      481 ds
//
LOCUS       XP_040944402             480 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ASHR1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944402
VERSION     XP_040944402.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088468.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..480
                     /product="histone-lysine N-methyltransferase ASHR1 isoform
                     X2"
                     /calculated_mol_wt=54493
     Region          19..274
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(22..23,209..214,222..224,245..248)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(22..23,210..214,247)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     Region          56..93
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          331..359
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(332,335..336,339..340,342,374,377..378,381..382,
                     384..385,412,419..420,423..424,427)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          364..406
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          372..446
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          411..443
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..480
                     /gene="LOC107910212"
                     /coded_by="XM_041088468.1:143..1585"
                     /db_xref="GeneID:107910212"
ORIGIN      
        1 meelqaslqp rgltlstfpd kgrsllaard fypgeviisq epyvcvpnns ltesrcdgcf
       61 sksnlkkcsa chvvwycgss cqklewklhr lecqllakld kerrksvtpt irmmvklylr
      121 rklqnenvip vtamdnynlv ealvshmsdi dekqlllyaq manlvnlilq lpnidikeia
      181 enfskfacna hticdselrs lgtglypvis iinhsclpna vlvfegrlav vravqhipkd
      241 sevsisyvet aastitrqkt lkeqylftci cvrcnklydd iqesailegy rcrdngcsgf
      301 llresdekgf vcqqcglirn keeirkiasd ikalsdkalk csssgnlqea ivlykniekl
      361 qkevchpfsi ilmrtwekll eilmqleewk ealaicrlti pvyervypgf hpllglqyys
      421 cgklewllge tddaiksftk avdilrithg tstpfmkell mkleearvea sfklssreds
//
LOCUS       XP_040944403             216 aa            linear   PLN 06-AUG-2024
DEFINITION  linoleate 9S-lipoxygenase 1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944403
VERSION     XP_040944403.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088469.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="linoleate 9S-lipoxygenase 1-like isoform X1"
                     /calculated_mol_wt=24929
     Region          5..>146
                     /region_name="PLN02337"
                     /note="lipoxygenase"
                     /db_xref="CDD:215193"
     CDS             1..216
                     /gene="LOC121214628"
                     /coded_by="XM_041088469.1:214..864"
                     /db_xref="GeneID:121214628"
ORIGIN      
        1 msmllgkeay ledwnstits avaggskfdv nfdfeeeigl pgafliknnh ysefylktlt
       61 lehvpghdrl hfvcgswvyp dkkydkprvf ftnktylphe mpkpllqyte qelmalrsng
      121 qgelqewdrv ydyayyndlg npdkgpntpa rfsedlpstp ilvgeelvdl rpsqfmkpik
      181 krcmevieiq niflhqnnsn fdlfrfhllv pivvtg
//
LOCUS       XP_040944404             197 aa            linear   PLN 06-AUG-2024
DEFINITION  linoleate 9S-lipoxygenase 1-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944404
VERSION     XP_040944404.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088470.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..197
                     /product="linoleate 9S-lipoxygenase 1-like isoform X2"
                     /calculated_mol_wt=22635
     Region          5..>146
                     /region_name="PLN02337"
                     /note="lipoxygenase"
                     /db_xref="CDD:215193"
     CDS             1..197
                     /gene="LOC121214628"
                     /coded_by="XM_041088470.1:214..807"
                     /db_xref="GeneID:121214628"
ORIGIN      
        1 msmllgkeay ledwnstits avaggskfdv nfdfeeeigl pgafliknnh ysefylktlt
       61 lehvpghdrl hfvcgswvyp dkkydkprvf ftnktylphe mpkpllqyte qelmalrsng
      121 qgelqewdrv ydyayyndlg npdkgpntpa rfsedlpstp ilvgeelvdl rpsqgveqma
      181 qhlritrkgk giqgrww
//
LOCUS       XP_040944405             252 aa            linear   PLN 06-AUG-2024
DEFINITION  oxysterol-binding protein-related protein 1C [Gossypium hirsutum].
ACCESSION   XP_040944405
VERSION     XP_040944405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088471.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="oxysterol-binding protein-related protein 1C"
                     /calculated_mol_wt=29199
     Region          12..>230
                     /region_name="Niban-like"
                     /note="Niban-like protein; cd23949"
                     /db_xref="CDD:469558"
     Region          35..167
                     /region_name="PH_ORP_plant"
                     /note="Plant Oxysterol binding protein related protein
                     Pleckstrin homology (PH) domain; cd13294"
                     /db_xref="CDD:241448"
     CDS             1..252
                     /gene="LOC107910260"
                     /coded_by="XM_041088471.1:368..1126"
                     /db_xref="GeneID:107910260"
ORIGIN      
        1 msqrnekplg eegtddpipp lqvdlkindi vgngisgmly kwvnygkgwk prwfvlqdgv
       61 lsyykingpd kilvsqetek gckvigeksr riisrhrdsf snnsltnrkp fgeihlevst
      121 frqskshdkr fsiftgtkml hlraesqddr eawmealqav kdmfhrvfhs kivapmvdkv
      181 aisteklrqr lvqegldsat iedseqimrn efatlqkklv llkqkqwlli dilqqlevyv
      241 mkmrkkhsif kn
//
LOCUS       XP_016693541             168 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S13, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693541
VERSION     XP_016693541.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838052.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="30S ribosomal protein S13, chloroplastic"
                     /calculated_mol_wt=18773
     Region          48..165
                     /region_name="rpsM"
                     /note="30S ribosomal protein S13; Validated; PRK05179"
                     /db_xref="CDD:235358"
     CDS             1..168
                     /gene="LOC107910261"
                     /coded_by="XM_016838052.2:505..1011"
                     /db_xref="GeneID:107910261"
ORIGIN      
        1 maqtlampva pslsficnkv ssmslsntas lpvsnppkhh glsivcvrvg gveipnnkrv
       61 efslqyihgi grtrarkilc dlqmenkitk dlseeeliti rdevskymie gdlrrfnaln
      121 irrlkeiqcy rgvrhiqglp crgqhtknnc rtlkgkrvai agkkkapr
//
LOCUS       XP_016693543             589 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase kinase kinase 1 [Gossypium
            hirsutum].
ACCESSION   XP_016693543
VERSION     XP_016693543.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838054.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693543.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..589
                     /product="mitogen-activated protein kinase kinase kinase
                     1"
                     /calculated_mol_wt=65150
     Region          317..570
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(323..326,329,331,343,345,379,395..398,440,444..445,
                     447,457..458)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..589
                     /gene="LOC107910263"
                     /coded_by="XM_016838054.2:245..2014"
                     /db_xref="GeneID:107910263"
ORIGIN      
        1 mhhlprffsn rvamdskrsr rkprlerrna akdidydags fcsslddsss ssssplftrs
       61 ldlnqtsfrl egtdgeldri crrlglngpe dfsiptaswe arkirsssdl lprsrlnrld
      121 spkeetalvk gggaaevtvd elaervlate ltrndsselk reccfsdkia vdnttttelk
      181 sstscvsnvv vgggnsgikg drppflkppp gmklkaidng cstwdlfrdf gpdddrgcai
      241 pvnshsssdd eeykredggf negntkeenl mrigdnavls escsfttsnd ddssstttep
      301 msnispngrf krtitywekg ellgsgsfgs vyegisddgf ffavkevsll dqgsqgkqsv
      361 iqleheiall sqfehenivq yygtdkdqsk lyiflelvtk gsllqlyqry hlrdsqvsay
      421 trqilhglky lhdrnvvhrd vkcanilvda sgsvkladfg lakatklndv ksckgtafwm
      481 apevvnqkgq gyglpadiws lgctvlemlt reipyhqlec mqalfrigkg epppipdsls
      541 kdaqdfimqc lqnnpearpt aakllqhpfv krpppshsgs asphlgrrf
//
LOCUS       XP_016693962             625 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016693962
VERSION     XP_016693962.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838473.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..625
                     /product="mediator of RNA polymerase II transcription
                     subunit 1"
                     /calculated_mol_wt=66320
     CDS             1..625
                     /gene="LOC107910590"
                     /coded_by="XM_016838473.2:1003..2880"
                     /db_xref="GeneID:107910590"
ORIGIN      
        1 mersepalvp ewlrstgpvt ggggnsahhf asssfnsdvs slvhhgrhrn frnigdsdsp
       61 ryafldrass lnsrrsssng sakhayssfs rnhrdkdrer dkdrsssgdh werdssdple
      121 siftsrveks gvstsrveid alrrshsmvs rkqseplprk iavgsgdsgn nnhnngngll
      181 sggtigsnih kavfekdfps lgtedrqagp qiarvsspgl ssaslsspac nsaliggegw
      241 tsalaemptm vgssstgslp aplivstsss gvqsvtvgln maealaqaps rtrtapqlsv
      301 ktqrreelai kqskqlipvt psmpkgsiln svdkskakpa irvsemnisv ksgqqqpssi
      361 hhgnqsphsg hvksempkts gkllvlkpgw engvssptqk dvagptnvnn kvatsqhavt
      421 avtsaparnn ntklssgerk aaalnpiagf tvekkpslaq tqsrndffnl lkkktsanta
      481 aglsganlhi ssstteksev tknvdspsmt thanengsaa tsngdtcqea qrfsddgekn
      541 mssyamvhpd eeeaaflrsl gweehsgdde glteeeinaf yqeymklrps lqlrhgvqpk
      601 laqsfatnld gasselsssd sgsea
//
LOCUS       XP_016693960             135 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane protein 50 homolog [Gossypium hirsutum].
ACCESSION   XP_016693960
VERSION     XP_016693960.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838471.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="transmembrane protein 50 homolog"
                     /calculated_mol_wt=14784
     Region          14..130
                     /region_name="UPF0220"
                     /note="Uncharacterized protein family (UPF0220);
                     pfam05255"
                     /db_xref="CDD:428395"
     CDS             1..135
                     /gene="LOC107910589"
                     /coded_by="XM_016838471.2:220..627"
                     /db_xref="GeneID:107910589"
ORIGIN      
        1 melgelwaif gpgvagavfg agwwfwvdav icssvnvsfv hylpgifasi aalmfncvrk
       61 edidyspyde gewrlklwlf fayvvsfvsl aasvglliqd slvksgpsmw tgtagilqcv
      121 fvlisgliyw tchse
//
LOCUS       XP_016693959             565 aa            linear   PLN 06-AUG-2024
DEFINITION  serine hydroxymethyltransferase 7 [Gossypium hirsutum].
ACCESSION   XP_016693959
VERSION     XP_016693959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..565
                     /product="serine hydroxymethyltransferase 7"
                     /calculated_mol_wt=62723
     Region          7..564
                     /region_name="PLN02271"
                     /note="serine hydroxymethyltransferase"
                     /db_xref="CDD:215153"
     CDS             1..565
                     /gene="LOC107910588"
                     /coded_by="XM_016838470.2:384..2081"
                     /db_xref="GeneID:107910588"
ORIGIN      
        1 mdlfhtksgl slgftkssia ddpislqmdt tfrfsvspvp lqlfeekddg hrenriesde
       61 eiriwgqsmc vkrqrdpkpl pnpckrfapd pgldqrraav rswgnqrlqe adpelseims
      121 kekqrqflgi eliasenfvc ravmealgsh ltnkysegmp garyytgnhf idqieslcqd
      181 ralaafnlds dkwgvnvqpy sctsanfavy talllpgdrm mgldspsggh mshgwympsg
      241 kkvsaasiff esfpykvnpq tgfidynkle ekaldyrpki licggssypr ewdyarfrqi
      301 adrcgavlmc dmahisglva akecaspfdy cdivtstthk slrgprggii fykrgaksrk
      361 qgmclsngdc tdqldfeeki nfavhaslqg gphnnhiaal aialkqvttp eykaymqqvk
      421 knaqalasal lkrkcklvtg gtdnhlllwd lttlgltgkc yeevcemchi tlnkttifgd
      481 ngaispggvr igtpamtsrg clesdfetia dflctaaeit scvqrdhgkl qkeflkglhn
      541 nkdvidlrir veafaaqfam pgyds
//
LOCUS       XP_040944407             323 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944407
VERSION     XP_040944407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088473.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36525
     CDS             1..323
                     /gene="LOC121214631"
                     /coded_by="XM_041088473.1:227..1198"
                     /db_xref="GeneID:121214631"
ORIGIN      
        1 mdpsstssvn gfytfltrgl ddlervylsn nfmsiqflqr vlcllrsfhs qllilvqklh
       61 lpvgdkwlde ymdessklwd achvlksgis gmetyyssgf niissldnhr hlspqlsrqv
      121 iraisrcrre amgleeenrg fmetriqpls lkleekvtme sklngfngfr gvlyamrnvs
      181 slllmmllyg gvhcwpessm vrggnegcvc fgstfmista rlqqrvaeei ngmngkagil
      241 lyefrrskma meevrgeler rggggggvve wetevglrek vdnmrgcfgi lrsgvenivg
      301 qiddffdeiv egrkklldlc shr
//
LOCUS       XP_016693954             349 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693954
VERSION     XP_016693954.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838465.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="transcription factor TGA3 isoform X1"
                     /calculated_mol_wt=39420
     Region          75..127
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          76..127
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(94,97..98,101..102,104..105,108..109,111..112,
                     115..116,118..119,122..123,125..126)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          161..236
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..349
                     /gene="LOC107910586"
                     /coded_by="XM_016838465.2:441..1490"
                     /db_xref="GeneID:107910586"
ORIGIN      
        1 msspsteltr rmtiyeqlnq isrwgdsfnr gdspntgsst ivegdvrlen kagyiscdqv
       61 epsrsdqetn kpidktqrrl aqnreaarks rlrkkayvqq lessrlqlaq leqelertrq
      121 qgiyisspsd tgyfglpgtv nsgitafeme yghwvevqnk qtcelrsalq ahitdielqi
      181 lvehglnhyc nlfrmkadaa kadvfylssg iwrtsaerff hwiggfrpse lsnvvmshie
      241 pltdqqqlev cnlrqssqqa edalsqgidk lqqnfscsva sdlswghyra qmaaatdiie
      301 alegfvnqad hlreqtllqm vriltthqaa rgllalgdyf nrlralssl
//
LOCUS       XP_016693955             349 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693955
VERSION     XP_016693955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838466.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="transcription factor TGA3 isoform X1"
                     /calculated_mol_wt=39420
     Region          75..127
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          76..127
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(94,97..98,101..102,104..105,108..109,111..112,
                     115..116,118..119,122..123,125..126)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          161..236
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..349
                     /gene="LOC107910586"
                     /coded_by="XM_016838466.2:272..1321"
                     /db_xref="GeneID:107910586"
ORIGIN      
        1 msspsteltr rmtiyeqlnq isrwgdsfnr gdspntgsst ivegdvrlen kagyiscdqv
       61 epsrsdqetn kpidktqrrl aqnreaarks rlrkkayvqq lessrlqlaq leqelertrq
      121 qgiyisspsd tgyfglpgtv nsgitafeme yghwvevqnk qtcelrsalq ahitdielqi
      181 lvehglnhyc nlfrmkadaa kadvfylssg iwrtsaerff hwiggfrpse lsnvvmshie
      241 pltdqqqlev cnlrqssqqa edalsqgidk lqqnfscsva sdlswghyra qmaaatdiie
      301 alegfvnqad hlreqtllqm vriltthqaa rgllalgdyf nrlralssl
//
LOCUS       XP_016693953             349 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693953
VERSION     XP_016693953.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838464.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..349
                     /product="transcription factor TGA3 isoform X1"
                     /calculated_mol_wt=39420
     Region          75..127
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          76..127
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(79..80,82..84,86..91,93..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(94,97..98,101..102,104..105,108..109,111..112,
                     115..116,118..119,122..123,125..126)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          161..236
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..349
                     /gene="LOC107910586"
                     /coded_by="XM_016838464.2:407..1456"
                     /db_xref="GeneID:107910586"
ORIGIN      
        1 msspsteltr rmtiyeqlnq isrwgdsfnr gdspntgsst ivegdvrlen kagyiscdqv
       61 epsrsdqetn kpidktqrrl aqnreaarks rlrkkayvqq lessrlqlaq leqelertrq
      121 qgiyisspsd tgyfglpgtv nsgitafeme yghwvevqnk qtcelrsalq ahitdielqi
      181 lvehglnhyc nlfrmkadaa kadvfylssg iwrtsaerff hwiggfrpse lsnvvmshie
      241 pltdqqqlev cnlrqssqqa edalsqgidk lqqnfscsva sdlswghyra qmaaatdiie
      301 alegfvnqad hlreqtllqm vriltthqaa rgllalgdyf nrlralssl
//
LOCUS       XP_016693956             338 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693956
VERSION     XP_016693956.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838467.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="transcription factor TGA3 isoform X2"
                     /calculated_mol_wt=38174
     Region          64..116
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          65..116
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(68..69,71..73,75..80,82..84)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(83,86..87,90..91,93..94,97..98,100..101,104..105,
                     107..108,111..112,114..115)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          150..225
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..338
                     /gene="LOC107910586"
                     /coded_by="XM_016838467.2:302..1318"
                     /db_xref="GeneID:107910586"
ORIGIN      
        1 mtiyeqlnqi srwgdsfnrg dspntgssti vegdvrlenk agyiscdqve psrsdqetnk
       61 pidktqrrla qnreaarksr lrkkayvqql essrlqlaql eqelertrqq giyisspsdt
      121 gyfglpgtvn sgitafemey ghwvevqnkq tcelrsalqa hitdielqil vehglnhycn
      181 lfrmkadaak advfylssgi wrtsaerffh wiggfrpsel snvvmshiep ltdqqqlevc
      241 nlrqssqqae dalsqgidkl qqnfscsvas dlswghyraq maaatdiiea legfvnqadh
      301 lreqtllqmv riltthqaar gllalgdyfn rlralssl
//
LOCUS       XP_016693957             338 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693957
VERSION     XP_016693957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838468.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="transcription factor TGA3 isoform X2"
                     /calculated_mol_wt=38174
     Region          64..116
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          65..116
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(68..69,71..73,75..80,82..84)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(83,86..87,90..91,93..94,97..98,100..101,104..105,
                     107..108,111..112,114..115)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          150..225
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..338
                     /gene="LOC107910586"
                     /coded_by="XM_016838468.2:367..1383"
                     /db_xref="GeneID:107910586"
ORIGIN      
        1 mtiyeqlnqi srwgdsfnrg dspntgssti vegdvrlenk agyiscdqve psrsdqetnk
       61 pidktqrrla qnreaarksr lrkkayvqql essrlqlaql eqelertrqq giyisspsdt
      121 gyfglpgtvn sgitafemey ghwvevqnkq tcelrsalqa hitdielqil vehglnhycn
      181 lfrmkadaak advfylssgi wrtsaerffh wiggfrpsel snvvmshiep ltdqqqlevc
      241 nlrqssqqae dalsqgidkl qqnfscsvas dlswghyraq maaatdiiea legfvnqadh
      301 lreqtllqmv riltthqaar gllalgdyfn rlralssl
//
LOCUS       XP_016693958             338 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor TGA3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693958
VERSION     XP_016693958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="transcription factor TGA3 isoform X2"
                     /calculated_mol_wt=38174
     Region          64..116
                     /region_name="bZIP_HBP1b-like"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized BZIP transcription factors with similarity
                     to Triticum aestivum HBP-1b: a DNA-binding and
                     dimerization domain; cd14708"
                     /db_xref="CDD:269856"
     Region          65..116
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269856"
     Site            order(68..69,71..73,75..80,82..84)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269856"
     Site            order(83,86..87,90..91,93..94,97..98,100..101,104..105,
                     107..108,111..112,114..115)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269856"
     Region          150..225
                     /region_name="DOG1"
                     /note="Seed dormancy control; pfam14144"
                     /db_xref="CDD:464092"
     CDS             1..338
                     /gene="LOC107910586"
                     /coded_by="XM_016838469.2:199..1215"
                     /db_xref="GeneID:107910586"
ORIGIN      
        1 mtiyeqlnqi srwgdsfnrg dspntgssti vegdvrlenk agyiscdqve psrsdqetnk
       61 pidktqrrla qnreaarksr lrkkayvqql essrlqlaql eqelertrqq giyisspsdt
      121 gyfglpgtvn sgitafemey ghwvevqnkq tcelrsalqa hitdielqil vehglnhycn
      181 lfrmkadaak advfylssgi wrtsaerffh wiggfrpsel snvvmshiep ltdqqqlevc
      241 nlrqssqqae dalsqgidkl qqnfscsvas dlswghyraq maaatdiiea legfvnqadh
      301 lreqtllqmv riltthqaar gllalgdyfn rlralssl
//
LOCUS       XP_040944408             269 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944408
VERSION     XP_040944408.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088474.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29747
     Region          <1..157
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..269
                     /gene="LOC107910585"
                     /coded_by="XM_041088474.1:891..1700"
                     /db_xref="GeneID:107910585"
ORIGIN      
        1 mvqllnlvvh nlaapalhns gfagscsriw qrdsywdarp ssrsneyplf iprqnycsts
       61 gdnswtdkss snfgvasmes errphldsin sfnyssasph tvethkdlqk gisllkksva
      121 cvttycynsl cldvpteast feafskllat lsstrevpsv fslkmacsrs gkqaqqlnks
      181 vwnvnspmss stllesahml pltknfsdhn lpssaasflf gnelsdngkn eslidgwdiv
      241 ehptfpppps etediehwtr amfidatrr
//
LOCUS       XP_040944409             269 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944409
VERSION     XP_040944409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088475.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29747
     Region          <1..157
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..269
                     /gene="LOC107910585"
                     /coded_by="XM_041088475.1:1059..1868"
                     /db_xref="GeneID:107910585"
ORIGIN      
        1 mvqllnlvvh nlaapalhns gfagscsriw qrdsywdarp ssrsneyplf iprqnycsts
       61 gdnswtdkss snfgvasmes errphldsin sfnyssasph tvethkdlqk gisllkksva
      121 cvttycynsl cldvpteast feafskllat lsstrevpsv fslkmacsrs gkqaqqlnks
      181 vwnvnspmss stllesahml pltknfsdhn lpssaasflf gnelsdngkn eslidgwdiv
      241 ehptfpppps etediehwtr amfidatrr
//
LOCUS       XP_040944410             269 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944410
VERSION     XP_040944410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088476.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29747
     Region          <1..157
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..269
                     /gene="LOC107910585"
                     /coded_by="XM_041088476.1:809..1618"
                     /db_xref="GeneID:107910585"
ORIGIN      
        1 mvqllnlvvh nlaapalhns gfagscsriw qrdsywdarp ssrsneyplf iprqnycsts
       61 gdnswtdkss snfgvasmes errphldsin sfnyssasph tvethkdlqk gisllkksva
      121 cvttycynsl cldvpteast feafskllat lsstrevpsv fslkmacsrs gkqaqqlnks
      181 vwnvnspmss stllesahml pltknfsdhn lpssaasflf gnelsdngkn eslidgwdiv
      241 ehptfpppps etediehwtr amfidatrr
//
LOCUS       XP_040944411            1675 aa            linear   PLN 06-AUG-2024
DEFINITION  interaptin isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944411
VERSION     XP_040944411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088477.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1675
                     /product="interaptin isoform X1"
                     /calculated_mol_wt=191461
     Region          18..140
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          534..1215
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          982..1607
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1675
                     /gene="LOC107910584"
                     /coded_by="XM_041088477.1:410..5437"
                     /db_xref="GeneID:107910584"
ORIGIN      
        1 msritkwkik kskvkvvfrl qfhathipqs gwdklyisfv padsgkttak ttkanvrngt
       61 ckwadpiyet trllqdiktk qfdeklyklv vamgssrssl lgeatvnlsd yadaskpsvv
      121 slpllgcdsg atlhvtvqll tsktgfrefe qqrelsgrgl qvgpdqngpd qsysgkvsvs
      181 eeivnnridk vnarvrfiek skeqplledv alnddcgdsn vgfhgssnts dnlyaeehem
      241 ssahendgqk stvyvaglgh ipqqergdss vhqllalgtn gwvhgwssdy sadndmaiay
      301 eennrlrgcl eaaessiqel kmelsflqnh anligdetet faeqlvaeis sgerlakevs
      361 alrsecsklk gdleqmtssk pypplnskep ikkdqnllfq dlevtwskgl lameakirel
      421 qnetclnyhq rdhrflhadl gallgilqdl kqrtqkeisi lrsvesdrck mkapgamsst
      481 ngdafipets fdvelyqpel gmvpcvsepg hmphepdslg atnamkgkif eflikldesk
      541 aereslvkki eqmecyyeal vqeleenqrr mleelqslrs ehsfclyrvq stksemesml
      601 ldmneeilrf seekqnlesl skelerraii aeaalkrarl nysiavgqlq kdlmllssqv
      661 msvfernenf irkafvgssr snslehlemm qshgldseey qstkplhcqn qdlgvnkqql
      721 ggdilledlk rslhlqesly qkvekevyev hcqnvyldlf sktlqetlle asadikpike
      781 rtdelarqle lsveykellm qkletamndv hslneykatc iakyndiilq kqtleanven
      841 vthenhllse kitdlesllm eykcykskyd acvlektkld nlleetrkhg nlqnnnsslq
      901 eelrmiktef delvvvkknl qntvdflrnr llkllssygk ffddlflssc lvdqdieskg
      961 ltsvmmrlee vqdimhekfl hlleekkdlk gerdkaqmsl svvesdmvlm kwkfdrdief
     1021 mvekidlsnv vvqkfqseie vvaeklkvss eveeiyaqqq rdllsdldhf eaelqeltsk
     1081 nweiaeeilv lksvseelgs sklkvaelme enkvlvqylq dkyeessela leinglkesl
     1141 hslhdelqae rsskeklesm vtdltsqmne kyhllfrfhq qkselvhlrq mlsdleyeks
     1201 gvcsllqqce eclnnarees stitflesql siaadvslif lrtqyetwtt dlvcqlsiyk
     1261 kqlvdlqkkh ldvegalngc lareahyiee ngrlsvildt lrsdleaamg engllltkss
     1321 svlaqledyn rrlektefdy cedknqlale vkrlkqllss sqeeivnlmi tkeelelnvl
     1381 vlnakldeqs tqinlleghk devlllqnqc nelcqrlskq ilkteefknf sihmkelkdk
     1441 anadstqvre kreseappta mqeslriafi kekyetrlqe lkhqlavskk hreemlwklq
     1501 daiddinnrk kseasyikin aelgikilel eaelqslisd krekmraydl mkaeldcsmi
     1561 slecckeekq kleasllern eekskiliel gilkellets tstmnvqmgr ndklkygcvs
     1621 dnlvidnapa rdidhkyldq ytsanskeag rpcfvlineg dcasvltnlq peqvt
//
LOCUS       XP_016693952            1656 aa            linear   PLN 06-AUG-2024
DEFINITION  interaptin isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693952
VERSION     XP_016693952.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838463.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693952.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1656
                     /product="interaptin isoform X2"
                     /calculated_mol_wt=189118
     Region          6..121
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          515..1196
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          963..1588
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1656
                     /gene="LOC107910584"
                     /coded_by="XM_016838463.2:477..5447"
                     /db_xref="GeneID:107910584"
ORIGIN      
        1 mlhitiqipq sgwdklyisf vpadsgktta kttkanvrng tckwadpiye ttrllqdikt
       61 kqfdeklykl vvamgssrss llgeatvnls dyadaskpsv vslpllgcds gatlhvtvql
      121 ltsktgfref eqqrelsgrg lqvgpdqngp dqsysgkvsv seeivnnrid kvnarvrfie
      181 kskeqplled valnddcgds nvgfhgssnt sdnlyaeehe mssahendgq kstvyvaglg
      241 hipqqergds svhqllalgt ngwvhgwssd ysadndmaia yeennrlrgc leaaessiqe
      301 lkmelsflqn hanligdete tfaeqlvaei ssgerlakev salrsecskl kgdleqmtss
      361 kpypplnske pikkdqnllf qdlevtwskg llameakire lqnetclnyh qrdhrflhad
      421 lgallgilqd lkqrtqkeis ilrsvesdrc kmkapgamss tngdafipet sfdvelyqpe
      481 lgmvpcvsep ghmphepdsl gatnamkgki feflikldes kaereslvkk ieqmecyyea
      541 lvqeleenqr rmleelqslr sehsfclyrv qstksemesm lldmneeilr fseekqnles
      601 lskelerrai iaeaalkrar lnysiavgql qkdlmllssq vmsvfernen firkafvgss
      661 rsnslehlem mqshgldsee yqstkplhcq nqdlgvnkqq lggdilledl krslhlqesl
      721 yqkvekevye vhcqnvyldl fsktlqetll easadikpik ertdelarql elsveykell
      781 mqkletamnd vhslneykat ciakyndiil qkqtleanve nvthenhlls ekitdlesll
      841 meykcyksky dacvlektkl dnlleetrkh gnlqnnnssl qeelrmikte fdelvvvkkn
      901 lqntvdflrn rllkllssyg kffddlflss clvdqdiesk gltsvmmrle evqdimhekf
      961 lhlleekkdl kgerdkaqms lsvvesdmvl mkwkfdrdie fmvekidlsn vvvqkfqsei
     1021 evvaeklkvs seveeiyaqq qrdllsdldh feaelqelts knweiaeeil vlksvseelg
     1081 ssklkvaelm eenkvlvqyl qdkyeessel aleinglkes lhslhdelqa ersskekles
     1141 mvtdltsqmn ekyhllfrfh qqkselvhlr qmlsdleyek sgvcsllqqc eeclnnaree
     1201 sstitflesq lsiaadvsli flrtqyetwt tdlvcqlsiy kkqlvdlqkk hldvegalng
     1261 clareahyie engrlsvild tlrsdleaam gengllltks ssvlaqledy nrrlektefd
     1321 ycedknqlal evkrlkqlls ssqeeivnlm itkeelelnv lvlnakldeq stqinllegh
     1381 kdevlllqnq cnelcqrlsk qilkteefkn fsihmkelkd kanadstqvr ekreseappt
     1441 amqeslriaf ikekyetrlq elkhqlavsk khreemlwkl qdaiddinnr kkseasyiki
     1501 naelgikile leaelqslis dkrekmrayd lmkaeldcsm islecckeek qkleasller
     1561 neekskilie lgilkellet ststmnvqmg rndklkygcv sdnlvidnap ardidhkyld
     1621 qytsanskea grpcfvline gdcasvltnl qpeqvt
//
LOCUS       XP_040944412             347 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944412
VERSION     XP_040944412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088478.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="agamous-like MADS-box protein AGL104 isoform X1"
                     /calculated_mol_wt=39768
     Region          2..75
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..347
                     /gene="LOC107908377"
                     /coded_by="XM_041088478.1:92..1135"
                     /db_xref="GeneID:107908377"
ORIGIN      
        1 mgrvkleikr ienntnrqvt fskrrnglik kayelsilcd idialimfsp sgrishfsgr
       61 rriedvfmry inlpdrereh alifpeqirh pdiqnkeyml rilqqlrsen dvalqlanpa
      121 sfnsdfkeiq qeivrlqqql qiaedqlray epdpfrftsm aelescekhl vetlanvvqr
      181 keyilsnhls sydpspiqqg lppsfenevv nwlpdngqnq sqifdasasl nplrdlsstv
      241 ydpllqgsms nvdphnigdq chvsnpnten fapwprsfas tglqsnsmpp tlyshvqqhg
      301 mvshqemaem vpndqqmeip gnynshgqma dnegsnyenr vhehngq
//
LOCUS       XP_016691044             346 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016691044
VERSION     XP_016691044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835555.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="agamous-like MADS-box protein AGL104 isoform X2"
                     /calculated_mol_wt=39639
     Region          2..75
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..346
                     /gene="LOC107908377"
                     /coded_by="XM_016835555.2:92..1132"
                     /db_xref="GeneID:107908377"
ORIGIN      
        1 mgrvkleikr ienntnrqvt fskrrnglik kayelsilcd idialimfsp sgrishfsgr
       61 rriedvfmry inlpdrereh alifpeqirh pdiqnkeyml rilqqlrsen dvalqlanpa
      121 sfnsdfkeiq qeivrlqqql qiaedqlray epdpfrftsm aelescekhl vetlanvvqr
      181 keyilsnhls sydpspiqqg lppsfenevv nwlpdngqnq sqifdasasl nplrdlsstv
      241 ydpllqgsms nvdphnigdq chvsnpnten fapwprsfas tglqsnsmpp tlyshvqhgm
      301 vshqemaemv pndqqmeipg nynshgqmad negsnyenrv hehngq
//
LOCUS       XP_016693950             797 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-D-xylosidase 7 [Gossypium hirsutum].
ACCESSION   XP_016693950
VERSION     XP_016693950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..797
                     /product="probable beta-D-xylosidase 7"
                     /calculated_mol_wt=87909
     Region          49..795
                     /region_name="PLN03080"
                     /note="Probable beta-xylosidase; Provisional"
                     /db_xref="CDD:178629"
     CDS             1..797
                     /gene="LOC107910582"
                     /coded_by="XM_016838461.2:102..2495"
                     /db_xref="GeneID:107910582"
ORIGIN      
        1 mqqsshttsl sirsfqfcsn nsvtftnmkl ptlsvlylih ltslllilae stqppfscdi
       61 sdprtksypf ckttlpitqr vqdlvsrltl dekisqlvns assiprlgip ayqwwsealh
      121 gvayslrvtq girfngtiqs atsfpqvilt aasfdahlwy riaqavgiea raiynagqam
      181 gmtfwapnin iyrdprwgrg qetpgedplv sgkyavsfvr giqgdsfegg klgqhlqasa
      241 cckhftaydl dnwkgvkryv fnakvslqdl adtyqppfqs ciqqgkasgi mcaynrvngv
      301 pncadynlls ktargqwgfn gyitsdcdav aiihedqgya klpedavadv lkagmdvncg
      361 tylkkytksa vekrklpvsk idralhnlfs vrirlglfdg npvkqpygti gsdkvcsqeh
      421 rnlaleaarn givllkntdk llplsktktt slavigpnan saktlvgnya gppckpvtpl
      481 qglqsyvkdt rfhqgcnavn cssafiaqsv kiakgadhvv lvmgldqtqe sedhdrvdll
      541 lppkqqnlis riarvaknpv ilvllsggpv disfakndqh igsilwagyp geaggralae
      601 iifgdhnpgg rlpvtwypqs yvnvpmtdmr mrpepsssyp grtyrfyqgp kvfefgygls
      661 ysnytyeilp vtqnrvhimv essnphrylp vsemgdevce kmkytvkvrv knhgamagkh
      721 pmllfvrqpk mvngrpvrql vafqsvnlna geradvefel rpcehlssak kdgsmvieeg
      781 syllsigdke seiqvvk
//
LOCUS       XP_016693951             161 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DOWNSTREAM OF FLC [Gossypium hirsutum].
ACCESSION   XP_016693951
VERSION     XP_016693951.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693951.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="protein DOWNSTREAM OF FLC"
                     /calculated_mol_wt=17709
     Region          29..110
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..161
                     /gene="LOC107910583"
                     /coded_by="XM_016838462.2:259..744"
                     /db_xref="GeneID:107910583"
ORIGIN      
        1 makvllfial cvlpalvsat rilnnqlvve gyvycdtcra gfetpktrsl adamvrlvcs
       61 drksgqvvfk kegytdktgk yqirvsedhl dqicdavlvk ssqlgcatms pgrerarvil
      121 tnfngisstt ryanamgfmv depeagcaem mkmyqedeed v
//
LOCUS       XP_040944413             322 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor RAP2-4 [Gossypium
            hirsutum].
ACCESSION   XP_040944413
VERSION     XP_040944413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088479.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="ethylene-responsive transcription factor RAP2-4"
                     /calculated_mol_wt=36036
     Region          138..197
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(139..140,142,144,146,148,152,154,161,163,166)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..322
                     /gene="LOC121214633"
                     /coded_by="XM_041088479.1:561..1529"
                     /db_xref="GeneID:121214633"
ORIGIN      
        1 mtatmdfnss gafqsdfygg elmealepfm ksasssspsp spspsynsls ssqtqatfyp
       61 afsglqepqp gstidlnnld qaqsnqiqaq fhfqtyhpsy lyqnpqpsfs snimvrfisp
      121 kpvsmkqmgs ppkptklyrg vrqrhwgkwv aeirlpknrt rlwlgtfeta eqaalaydka
      181 ayklrgdsar lnfpnlrhqg shigeykplh ssvdaklqai ceslehdqkq gnkkktskem
      241 kkdkvqvatp epeektvkle nssssspvvs enevsaessp lsdltfsnfn ehswpefgfs
      301 senfmlskyp syeidwdsil ks
//
LOCUS       XP_016693505             265 aa            linear   PLN 06-AUG-2024
DEFINITION  probable enoyl-CoA hydratase 1, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_016693505
VERSION     XP_016693505.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838016.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..265
                     /product="probable enoyl-CoA hydratase 1, peroxisomal"
                     /calculated_mol_wt=28762
     Region          1..262
                     /region_name="PLN02888"
                     /note="enoyl-CoA hydratase"
                     /db_xref="CDD:215480"
     Site            order(30,32,64,68..72,108,110..112,134..135,138)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(70,112)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(100,121..124,136..139,145,147..149,151..152,
                     157..158,160..161,163..164,167,178,181,196,199..200)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..265
                     /gene="LOC107910232"
                     /coded_by="XM_016838016.2:303..1100"
                     /db_xref="GeneID:107910232"
ORIGIN      
        1 megsssdkli vvtrepdgia ivtinrpksl nsltrpmmvd lakafkalak dnsvrviils
       61 gagrafcsgv dltaaqdvfk gdvkdpetdp vvqmeqcpkp iigaingvai tagfeialac
      121 dmlvaakgat fvdtharfgi fpswglsqkl arfigpnkar evslaampls aeeaeklgfv
      181 nyvvdqnevl nkarqlagai mknsqdlvlr yksvindgyk ldlrqglaie kergheyydg
      241 mtpeqfkkmq efiarrsskk psskl
//
LOCUS       XP_016693506             209 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693506
VERSION     XP_016693506.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838017.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23565
     CDS             1..209
                     /gene="LOC107910234"
                     /coded_by="XM_016838017.2:65..694"
                     /db_xref="GeneID:107910234"
ORIGIN      
        1 mvsfkaslsp emgkttsafe nlwkkrnlee pldgdeetli krsktertkp gfdmelhldt
       61 plpiewrrcl dlqsgtihfy nsrtdtrtck dprtspecps tghmsldlel nlpcvsnatn
      121 peavskqncv gsvekklngw gglmqkrpwl tveeakeeev emvatvcrqc hmlvmlikss
      181 pacpnckfrh pppdqgppkl fnqrhsllc
//
LOCUS       XP_016693507             493 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693507
VERSION     XP_016693507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838018.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..493
                     /product="uncharacterized protein"
                     /calculated_mol_wt=53839
     Region          307..425
                     /region_name="TMEM135_C_rich"
                     /note="N-terminal cysteine-rich region of Transmembrane
                     protein 135; pfam15982"
                     /db_xref="CDD:374269"
     CDS             1..493
                     /gene="LOC107910235"
                     /coded_by="XM_016838018.2:133..1614"
                     /db_xref="GeneID:107910235"
ORIGIN      
        1 mspsadgtvk cacrcssssl enggfnddsa dygrlssvdg tcshcagskp ssnsssalaf
       61 gtvpltqsek lqrflvasak gfsigaglrg glalfsiiar lrrkksrkve sfsdkeaivv
      121 giketirygl flgtfsgtfv svdeiivalg ghhrtakwra liaglvagps mlltgpnkqh
      181 tslaiyilmr aavlasrcgm kskrfgklck pltwkhgdif lmclsssqil ssyllkpesf
      241 ppsyrsflnk hvgkdqvilq gvkehasglp ytnleaiekf ykakgadvkl dpnmkipcsm
      301 ihgnqacssh vftffseayk rslpvylpvy liptlivhrq gllkrpytil gksllgtars
      361 slflsaytas awvwtcmvnr fwgkcdipiv amgtfptgla laiekksrri eislycvara
      421 ieslftcmad vgylpksmnl kradvvifsl staiimhcya qerevfrsky lsvldwvfgv
      481 ppppcetppc knr
//
LOCUS       XP_016693509             266 aa            linear   PLN 06-AUG-2024
DEFINITION  5'-adenylylsulfate reductase-like 4 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693509
VERSION     XP_016693509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838020.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="5'-adenylylsulfate reductase-like 4 isoform X1"
                     /calculated_mol_wt=30918
     Region          67..166
                     /region_name="PDI_a_ERp44_like"
                     /note="PDIa family, endoplasmic reticulum protein 44
                     (ERp44)-like subfamily; composed of uncharacterized
                     PDI-like eukaryotic proteins containing only one redox
                     active TRX (a) domain with a CXXS motif, similar to ERp44.
                     CXXS is still a redox active motif; cd02999"
                     /db_xref="CDD:239297"
     Site            96
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239297"
     CDS             1..266
                     /gene="LOC107910237"
                     /coded_by="XM_016838020.2:302..1102"
                     /db_xref="GeneID:107910237"
ORIGIN      
        1 mgtkiwemri lilflwwrlt cavtvpvrvp lcpknsvfea vfdfrdsfcs ihsdfiesid
       61 svgvtegdei slqkalnmvh rniheyvavl fyaswcpfsr sfrpsfltls ssypsiphfa
      121 ikesavrpsi lskygvhgfp tlfllnskmr vryhgnrsfe slstfyndvt gfqikslgkt
      181 srdktrhvlk hekhksseqe swsfswarsp qnllrqetyl alattfvlfr llylfyptll
      241 vfarftwkri nrdvklgtml ehplli
//
LOCUS       XP_040944414             206 aa            linear   PLN 06-AUG-2024
DEFINITION  5'-adenylylsulfate reductase-like 4 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944414
VERSION     XP_040944414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088480.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="5'-adenylylsulfate reductase-like 4 isoform X2"
                     /calculated_mol_wt=23327
     Region          67..166
                     /region_name="PDI_a_ERp44_like"
                     /note="PDIa family, endoplasmic reticulum protein 44
                     (ERp44)-like subfamily; composed of uncharacterized
                     PDI-like eukaryotic proteins containing only one redox
                     active TRX (a) domain with a CXXS motif, similar to ERp44.
                     CXXS is still a redox active motif; cd02999"
                     /db_xref="CDD:239297"
     Site            96
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239297"
     CDS             1..206
                     /gene="LOC107910237"
                     /coded_by="XM_041088480.1:287..907"
                     /db_xref="GeneID:107910237"
ORIGIN      
        1 mgtkiwemri lilflwwrlt cavtvpvrvp lcpknsvfea vfdfrdsfcs ihsdfiesid
       61 svgvtegdei slqkalnmvh rniheyvavl fyaswcpfsr sfrpsfltls ssypsiphfa
      121 ikesavrpsi lskygvhgfp tlfllnskmr vryhgnrsfe slstfyndvt vncdclsgsp
      181 cimhlvaslh kvldsrgyrl sdkisg
//
LOCUS       XP_040944415             351 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHOSPHATE-INDUCED 1 [Gossypium hirsutum].
ACCESSION   XP_040944415
VERSION     XP_040944415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088481.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..351
                     /product="protein PHOSPHATE-INDUCED 1"
                     /calculated_mol_wt=37777
     Region          82..350
                     /region_name="Phi_1"
                     /note="Phosphate-induced protein 1 conserved region;
                     pfam04674"
                     /db_xref="CDD:461386"
     CDS             1..351
                     /gene="LOC121214636"
                     /coded_by="XM_041088481.1:59..1114"
                     /db_xref="GeneID:121214636"
ORIGIN      
        1 mntvllvfiy tlfhpsiptt qsanlsqlnn nnkkmasfit ptilkiflii slfqiclgvr
       61 klsevveeqp qllkyhngpl lsgpitvnli wygkfkpser aiisdfvtsl ssnpsspslk
      121 aqptvaqwwr ttekyyhlas kksslslslg kqildehysl gkslkkkqiv elaskgdqky
      181 ainvvltasd vavegfcmsr cgthgsalss tkgkrsskfa yiwvgnaqtq cpgqcawpfh
      241 qpiygpqspp liapnnnvgv dgmvinlasl fagtvtnpfg ngyyqgpaea pleassacpg
      301 iygkgaypgh agnllvdpst gasynahgen grkyllpaly dpatsscstl v
//
LOCUS       XP_016693512             337 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase SAPK2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693512
VERSION     XP_016693512.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838023.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..337
                     /product="serine/threonine-protein kinase SAPK2 isoform
                     X1"
                     /calculated_mol_wt=38041
     Region          3..259
                     /region_name="STKc_SnRK2"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     2; cd14662"
                     /db_xref="CDD:271132"
     Site            order(10..14,18,31,33,61,77..80,84,86..87,89,122..123,125,
                     127..128,130,142..143,146,160..164,166,196..199)
                     /site_type="active"
                     /db_xref="CDD:271132"
     Site            order(10..13,18,31,33,61,77..80,84,127..128,130,142..143)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271132"
     Site            order(84,86..87,89,123,125,127,146,160..164,166,196..199)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271132"
     Site            order(142..153,157..164)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271132"
     CDS             1..337
                     /gene="LOC107910239"
                     /coded_by="XM_016838023.2:402..1415"
                     /db_xref="GeneID:107910239"
ORIGIN      
        1 meryeivkdi gsgnfgvvkl vrdrwtkelf avkfierghk idehvqreim nhrslkhpni
       61 vrfkevlitp thlaivmeya aggelferic sagrfsedea rfffqqlisg vsychsmeic
      121 hrdlklentl ldgstaprvk icdfgyskss vlhsqpkstv gtpayiapev lskkeydgki
      181 advwscgvtl fvmlvgaypf edpndpknfk ntigrilsah ysipdyvrvs meckhllsri
      241 fvanpemrit ipeirshpwf lknlpielme ggswqsqdvn npsqtieevq fiiqeamktt
      301 evpkvgefsm ggsmdlddld agtdldvdts gdfvcpl
//
LOCUS       XP_016693513             331 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase SAPK1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693513
VERSION     XP_016693513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838024.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..331
                     /product="serine/threonine-protein kinase SAPK1 isoform
                     X2"
                     /calculated_mol_wt=37244
     Region          3..253
                     /region_name="STKc_SnRK2"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Sucrose nonfermenting 1-related protein kinase subfamily
                     2; cd14662"
                     /db_xref="CDD:271132"
     Site            order(10..14,18,31,33,61,77..80,84,86..87,89,116..117,119,
                     121..122,124,136..137,140,154..158,160,190..193)
                     /site_type="active"
                     /db_xref="CDD:271132"
     Site            order(10..13,18,31,33,61,77..80,84,121..122,124,136..137)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271132"
     Site            order(84,86..87,89,117,119,121,140,154..158,160,190..193)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271132"
     Site            order(136..147,151..158)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271132"
     CDS             1..331
                     /gene="LOC107910239"
                     /coded_by="XM_016838024.2:635..1630"
                     /db_xref="GeneID:107910239"
ORIGIN      
        1 meryeivkdi gsgnfgvvkl vrdrwtkelf avkfierghk idehvqreim nhrslkhpni
       61 vrfkevlitp thlaivmeya aggelferic sagrfsedeq lisgvsychs meichrdlkl
      121 entlldgsta prvkicdfgy skssvlhsqp kstvgtpayi apevlskkey dgkiadvwsc
      181 gvtlfvmlvg aypfedpndp knfkntigri lsahysipdy vrvsmeckhl lsrifvanpe
      241 mritipeirs hpwflknlpi elmeggswqs qdvnnpsqti eevqfiiqea mkttevpkvg
      301 efsmggsmdl ddldagtdld vdtsgdfvcp l
//
LOCUS       XP_016693515             314 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHOSPHATE-INDUCED 1 [Gossypium hirsutum].
ACCESSION   XP_016693515
VERSION     XP_016693515.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838026.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693515.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..314
                     /product="protein PHOSPHATE-INDUCED 1"
                     /calculated_mol_wt=33356
     Region          55..313
                     /region_name="Phi_1"
                     /note="Phosphate-induced protein 1 conserved region;
                     pfam04674"
                     /db_xref="CDD:461386"
     CDS             1..314
                     /gene="LOC107910240"
                     /coded_by="XM_016838026.2:1..945"
                     /db_xref="GeneID:107910240"
ORIGIN      
        1 masfatsnvv vlyfvvlvsw ihfnaearrl ggsvpesdqt qqpllfqyhn gplltgnisv
       61 nliwygnfkp sqraivsdfi nslassklvs pqpsvatwwk amdkyyhltn kssslvislg
      121 sqildesysl gksltneqil qlaskgsqrn pinvvltsad vavegfcssr cgthgsdsgs
      181 klayiwvgns etqcpghcaw pfhqpiygpq npplvapnnd vgldgmvinl atllagtvtn
      241 pfgngyyqgp keapmeaasa cpgiygkgay pgyagdlpvd attgasynah gvngrkyllp
      301 alfdpststc atla
//
LOCUS       XP_016691013             190 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691013
VERSION     XP_016691013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835524.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20774
     CDS             1..190
                     /gene="LOC107908327"
                     /coded_by="XM_016835524.2:191..763"
                     /db_xref="GeneID:107908327"
ORIGIN      
        1 mkslgnaphk afkypsyspq rrnqpkmlrs kalmaslrms skkdvvvvas grsklndkac
       61 kkhpkhrqsp gvcslclrek llqlsassss gstttittia sscssslssy ssssssassy
      121 sspmhrypfp tegkdsfsfl ffsgkniltk srsvafssrl rsnrtgffsk lllpkkykee
      181 ggellktrvh
//
LOCUS       XP_016691014             121 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691014
VERSION     XP_016691014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835525.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="uncharacterized protein"
                     /calculated_mol_wt=13333
     CDS             1..121
                     /gene="LOC107908329"
                     /coded_by="XM_016835525.2:343..708"
                     /db_xref="GeneID:107908329"
ORIGIN      
        1 msiilpfwrs kwgpllklkd evetiidkae evtdivekva gqveevaddi gnhlpegrlk
       61 nalqfledma qntadgarla gdlidkveev egkveswmge nsideeakrt kedeaaakdq
      121 a
//
LOCUS       XP_016691015             326 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH94 [Gossypium hirsutum].
ACCESSION   XP_016691015
VERSION     XP_016691015.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691015.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="transcription factor bHLH94"
                     /calculated_mol_wt=36433
     Region          130..196
                     /region_name="bHLH_AtFAMA_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana protein FAMA and similar proteins;
                     cd11448"
                     /db_xref="CDD:381454"
     Site            order(132..133,136..137,139..140,144,163..164)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381454"
     Site            order(142..143,146,149..150,153,164..165,168..169,172,175,
                     178..179,182,185..186,188..189,192,195..196)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381454"
     CDS             1..326
                     /gene="LOC107908330"
                     /coded_by="XM_016835526.2:317..1297"
                     /db_xref="GeneID:107908330"
ORIGIN      
        1 maleavvypq dpfpyvfddf stvgggvgfd fclqnedkal lgilqqpnhh dlhanwdsss
       61 tnstmqhtkd qwdpysspet ctvdqslpgp irfpplmetp aptttttnsr rkrrrtrssk
      121 nkeelenqrm thiavernrr kqmnqylaal rslmppsyvq rgdqasiigg aidfvkeleq
      181 llqsmeahkr ttqqpqhday sspfaefftf pqfstratqc nsnqqqpvaa aavtsesvad
      241 ievtmvesha nlkilskkqp rqllklvagl qglrlvvqhl nvtamnemal ysisvkveeg
      301 chlstvdeia aavnqmlgri qeengf
//
LOCUS       XP_040944416             158 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944416
VERSION     XP_040944416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088482.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..158
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18111
     Region          78..>144
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     CDS             1..158
                     /gene="LOC121214637"
                     /coded_by="XM_041088482.1:481..957"
                     /db_xref="GeneID:121214637"
ORIGIN      
        1 mgkiidiakd fsleqlfsrc dlgscflaff layskvatie edinellakl nfseeeamrv
       61 vstkvgstss qgfetwaigk lmaeekvnre aiyrvfktlw ftkeevnfvs lkegailvkf
      121 gneddrkril nlspwlfyqc lfnmvpyvkd kkygrvcl
//
LOCUS       XP_016693516             141 aa            linear   PLN 06-AUG-2024
DEFINITION  DCN1-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016693516
VERSION     XP_016693516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..141
                     /product="DCN1-like protein 1"
                     /calculated_mol_wt=16764
     Region          42..>131
                     /region_name="Cullin_binding"
                     /note="Cullin binding; pfam03556"
                     /db_xref="CDD:460971"
     CDS             1..141
                     /gene="LOC107910241"
                     /coded_by="XM_016838027.2:123..548"
                     /db_xref="GeneID:107910241"
ORIGIN      
        1 mhpkkwvnpi qptrfpvlpp isfapeewrr glkalrvdtv sklkkalpeq ekevrrpsnf
       61 vdfysysfcy clteekqksi diesicqlld lvlgsqfraq vdyfieylki qsdykvinld
      121 qwmgffrfcn khclrcynvr t
//
LOCUS       XP_016693518             416 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL11 [Gossypium hirsutum].
ACCESSION   XP_016693518
VERSION     XP_016693518.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838029.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693518.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..416
                     /product="RING-H2 finger protein ATL11"
                     /calculated_mol_wt=46275
     Region          <134..264
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          148..191
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            176..181
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..416
                     /gene="LOC107910242"
                     /coded_by="XM_016838029.2:240..1490"
                     /db_xref="GeneID:107910242"
ORIGIN      
        1 mnrkdhsllf lplfrlnhgn gndksllffl cfalsfslst aqsqtpagpp pppsypnssg
       61 pagnqfnpsm aivmvvlvta ffvmgffsvy vrqcterrtr ggnwdaamnf grrsrrsirg
      121 ldssviesfp tflystvkgl kigkdtleca vclnefedde tlrmipicnh vfhpdcidaw
      181 lsshstcpvc ranlapmpgd tttcataqin dsdsetennn tsdetghldv vnrardiesp
      241 evnlinsnta nnqnrqqrsl stgwmltrlf prshstghsl vqpgencerf tlrlpedvrt
      301 qlmnsslsrt kscvafprar sskrgyrsrs lgrnyynyer fdrpdrwgft mtppffsrig
      361 svkspkpavc ggdegsatpp kglykstksp fdrlfiggee nvgeqssdrl rsesqv
//
LOCUS       XP_040944417             282 aa            linear   PLN 06-AUG-2024
DEFINITION  GEM-like protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944417
VERSION     XP_040944417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088483.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..282
                     /product="GEM-like protein 1 isoform X1"
                     /calculated_mol_wt=30412
     Region          171..277
                     /region_name="PH-GRAM_GEM"
                     /note="GLABRA 2 expression modulator (GEM) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13222"
                     /db_xref="CDD:270042"
     CDS             1..282
                     /gene="LOC107910243"
                     /coded_by="XM_041088483.1:266..1114"
                     /db_xref="GeneID:107910243"
ORIGIN      
        1 msqpasdpnn iseakqstts sdsnrvppls sdyapypkld pkdvapppen wtnvsmgsqs
       61 qpnqgpatfs gsaattmpde snpyvspapv rsssvktdkm gavkevlgkl gkkaaedtkk
      121 akeiagnmwq hlktgpsfad aavgriaqgt kvlaeggydk ifrttfetap eeqllktyac
      181 ylstsagpvm gvlylssqkl afcsdnplsy qvgaqtqwsy ykvaiplhql ravnpstska
      241 npaekyiqii svdnhefwfm gfvhydsavk nlqrplqpar ss
//
LOCUS       XP_016693519             281 aa            linear   PLN 06-AUG-2024
DEFINITION  GEM-like protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693519
VERSION     XP_016693519.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693519.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..281
                     /product="GEM-like protein 1 isoform X2"
                     /calculated_mol_wt=30310
     Region          170..276
                     /region_name="PH-GRAM_GEM"
                     /note="GLABRA 2 expression modulator (GEM) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13222"
                     /db_xref="CDD:270042"
     CDS             1..281
                     /gene="LOC107910243"
                     /coded_by="XM_016838030.2:289..1134"
                     /db_xref="GeneID:107910243"
ORIGIN      
        1 msqpasdpnn iseakqstts sdsnrvppls sdyapypkld pkdvapppen wtnvsmgsqs
       61 qpnqgpatfs gsaattmpde snpyvspapv rsssvknkmg avkevlgklg kkaaedtkka
      121 keiagnmwqh lktgpsfada avgriaqgtk vlaeggydki frttfetape eqllktyacy
      181 lstsagpvmg vlylssqkla fcsdnplsyq vgaqtqwsyy kvaiplhqlr avnpstskan
      241 paekyiqiis vdnhefwfmg fvhydsavkn lqrplqpars s
//
LOCUS       XP_040944418             107 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein arginine N-methyltransferase 1 [Gossypium
            hirsutum].
ACCESSION   XP_040944418
VERSION     XP_040944418.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088484.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..107
                     /product="probable protein arginine N-methyltransferase 1"
                     /calculated_mol_wt=12270
     CDS             1..107
                     /gene="LOC107910244"
                     /coded_by="XM_041088484.1:227..550"
                     /db_xref="GeneID:107910244"
ORIGIN      
        1 mqilqarqfs gerddyihaf vayfdvsftk chklmgfstg prsrathwkq tvlyledvlt
       61 icegetiigs mtvapnkknp rdvdimvkys lsgrrcvvsr vqfykmr
//
LOCUS       XP_016691016             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691016
VERSION     XP_016691016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835527.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22316
     CDS             1..193
                     /gene="LOC107908331"
                     /coded_by="XM_016835527.2:115..696"
                     /db_xref="GeneID:107908331"
ORIGIN      
        1 mnycnkttht nqrnmkisss qqsslleccm sgdsgitqel fqckichfrs qhrycsnlyp
       61 kagvyevcnw clnqeehske ksqnslkssa sskgkneddn nknkkkadnh pgagfkgnrr
      121 nanslkqqql mkvpikkpkl eekmkrkrii knayleeklr rtkleeiskn gvitrhfsrn
      181 kvrrykllde vss
//
LOCUS       XP_016693524             252 aa            linear   PLN 06-AUG-2024
DEFINITION  14-3-3-like protein B [Gossypium hirsutum].
ACCESSION   XP_016693524
VERSION     XP_016693524.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838035.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693524.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="14-3-3-like protein B"
                     /calculated_mol_wt=28309
     Region          11..248
                     /region_name="14-3-3"
                     /note="14-3-3 domain; cl02098"
                     /db_xref="CDD:470464"
     Site            order(17,20..21,23..24,26,29,69,72,76,91,95,98..99,102)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206762"
     Site            order(60,67,133,140..141,182,185..186,189,192..193,230,
                     233,236..237)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206762"
     CDS             1..252
                     /gene="LOC107910246"
                     /coded_by="XM_016838035.2:272..1030"
                     /db_xref="GeneID:107910246"
ORIGIN      
        1 mattapdnls rdqyvylakl seqaeryeem vqfmqklvlg stpaaeltve ernllsvayk
       61 nvigslraaw rivssieqke egrkneehvv lvkeykskie selsevcasi ltllesnlip
      121 sataseskvf ylkmkgdyhr ylaefkvgde rkaaaedtml sykaaqdial adlapthpir
      181 lglalnfsvf yyeilnqsdk acsmakqafe eaiaeldtlg eesykdstli mqllrdnltl
      241 wtsdvqdqld ep
//
LOCUS       XP_040944419             176 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_040944419
VERSION     XP_040944419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088485.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..176
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=20585
     Region          16..109
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..176
                     /gene="LOC107910247"
                     /coded_by="XM_041088485.1:438..968"
                     /db_xref="GeneID:107910247"
ORIGIN      
        1 mstsavevsg ekvkamwdkr ltekfcdici keilkgnrpg thftkdgwlk imtnfeketg
       61 kgfsqrqlkn rwdalkkewk awkklkgedt glrwnpikri vdasddwwes rlqvvpeaqk
      121 frtlgidpef kgkldqmfmg iaakvikhgh lllvhsrlif lrmlptkylk rmkkki
//
LOCUS       XP_040944420             176 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_040944420
VERSION     XP_040944420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088486.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..176
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=20585
     Region          16..109
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..176
                     /gene="LOC107910247"
                     /coded_by="XM_041088486.1:449..979"
                     /db_xref="GeneID:107910247"
ORIGIN      
        1 mstsavevsg ekvkamwdkr ltekfcdici keilkgnrpg thftkdgwlk imtnfeketg
       61 kgfsqrqlkn rwdalkkewk awkklkgedt glrwnpikri vdasddwwes rlqvvpeaqk
      121 frtlgidpef kgkldqmfmg iaakvikhgh lllvhsrlif lrmlptkylk rmkkki
//
LOCUS       XP_040944421             176 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_040944421
VERSION     XP_040944421.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088487.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..176
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=20585
     Region          16..109
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..176
                     /gene="LOC107910247"
                     /coded_by="XM_041088487.1:417..947"
                     /db_xref="GeneID:107910247"
ORIGIN      
        1 mstsavevsg ekvkamwdkr ltekfcdici keilkgnrpg thftkdgwlk imtnfeketg
       61 kgfsqrqlkn rwdalkkewk awkklkgedt glrwnpikri vdasddwwes rlqvvpeaqk
      121 frtlgidpef kgkldqmfmg iaakvikhgh lllvhsrlif lrmlptkylk rmkkki
//
LOCUS       XP_040944422             176 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein-like [Gossypium
            hirsutum].
ACCESSION   XP_040944422
VERSION     XP_040944422.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088488.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..176
                     /product="L10-interacting MYB domain-containing
                     protein-like"
                     /calculated_mol_wt=20585
     Region          16..109
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..176
                     /gene="LOC107910247"
                     /coded_by="XM_041088488.1:386..916"
                     /db_xref="GeneID:107910247"
ORIGIN      
        1 mstsavevsg ekvkamwdkr ltekfcdici keilkgnrpg thftkdgwlk imtnfeketg
       61 kgfsqrqlkn rwdalkkewk awkklkgedt glrwnpikri vdasddwwes rlqvvpeaqk
      121 frtlgidpef kgkldqmfmg iaakvikhgh lllvhsrlif lrmlptkylk rmkkki
//
LOCUS       XP_016693529             133 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ homolog subfamily B member 6-A [Gossypium hirsutum].
ACCESSION   XP_016693529
VERSION     XP_016693529.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838040.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..133
                     /product="dnaJ homolog subfamily B member 6-A"
                     /calculated_mol_wt=15645
     Region          34..>109
                     /region_name="DnaJ"
                     /note="DnaJ-class molecular chaperone with C-terminal Zn
                     finger domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0484"
                     /db_xref="CDD:440252"
     CDS             1..133
                     /gene="LOC107910249"
                     /coded_by="XM_016838040.2:250..651"
                     /db_xref="GeneID:107910249"
ORIGIN      
        1 mrvdwgdlpe epqqpeqdsn lnfdffslis kpkdyykile vdydatedai rsnyirlalk
       61 whpdkqkddg dsatsrfqei neayqvlidp vkrseydkkg mlhvydydii eylnrykgli
      121 ltcnglgirq siw
//
LOCUS       XP_040944423             753 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944423
VERSION     XP_040944423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088489.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..753
                     /product="rho GTPase-activating protein REN1 isoform X1"
                     /calculated_mol_wt=83015
     Region          79..173
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          229..372
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          622..701
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..753
                     /gene="LOC107910254"
                     /coded_by="XM_041088489.1:187..2448"
                     /db_xref="GeneID:107910254"
ORIGIN      
        1 matkknessq kqqrmvfkkd epskghqgda avvaspgpll qapptpksrv rnsvlksgpl
       61 flstkafthi lpekytlrgi gwtswkkrwf iltqtslvff ksdpsaipqk enevnlilgg
      121 idlnisgsvv vkadkklltv lfqdgqdgrt ftlkaessed lyewkaafen alsqapssph
      181 vlgkndilgn ekanavngsk dpvnnkqpvr stvlgkpill aledvdgapt flekalrfie
      241 ehgtkaegvl rlaadvedvk criqeyekgk tefspeedph viadcikyvi relpscpvpa
      301 sccnalleay rtlggdrvnt mreavldafp epnrrllqri lmmmravasn ktlnrmsssa
      361 vaacmaplil rplvsgdcei endfnagdds siqllraaaa anhaqvivit lleeydkifg
      421 egyvppnlyy gteesgsese sesesesese seeaadddcn datsgsnayc dsdyvasgtg
      481 sksghsinnd ldddkdsdyl ssssepsiad gdlkatkkls sslhsslsen dlqrsednqs
      541 nkssvieanm faefghrakr ptvwgwaiak kklsmepvhf pskeeaeier ikaeksdler
      601 ghteeiegnl vyeaclekqk ktlhghcqal qndvsrleee lhrerdkrta leagltpsqg
      661 tvtlpntvde kikadikdia qaeadinnln kkvdelwmql nqlleqnsvs mndrsnrhqp
      721 nhqekresgc sfltgwityr pghfrcgles tsn
//
LOCUS       XP_040944424             751 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944424
VERSION     XP_040944424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088490.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..751
                     /product="rho GTPase-activating protein REN1 isoform X2"
                     /calculated_mol_wt=82774
     Region          79..173
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          229..372
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          622..699
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..751
                     /gene="LOC107910254"
                     /coded_by="XM_041088490.1:188..2443"
                     /db_xref="GeneID:107910254"
ORIGIN      
        1 matkknessq kqqrmvfkkd epskghqgda avvaspgpll qapptpksrv rnsvlksgpl
       61 flstkafthi lpekytlrgi gwtswkkrwf iltqtslvff ksdpsaipqk enevnlilgg
      121 idlnisgsvv vkadkklltv lfqdgqdgrt ftlkaessed lyewkaafen alsqapssph
      181 vlgkndilgn ekanavngsk dpvnnkqpvr stvlgkpill aledvdgapt flekalrfie
      241 ehgtkaegvl rlaadvedvk criqeyekgk tefspeedph viadcikyvi relpscpvpa
      301 sccnalleay rtlggdrvnt mreavldafp epnrrllqri lmmmravasn ktlnrmsssa
      361 vaacmaplil rplvsgdcei endfnagdds siqllraaaa anhaqvivit lleeydkifg
      421 egyvppnlyy gteesgsese sesesesese seeaadddcn datsgsnayc dsdyvasgtg
      481 sksghsinnd ldddkdsdyl ssssepsiad gdlkatkkls sslhsslsen dlqrsednqs
      541 nkssvieanm faefghrakr ptvwgwaiak kklsmepvhf pskeeaeier ikaeksdler
      601 ghteeiegnl vyeaclekqk ktlhghcqal qndvsrleee lhrerdkrta leagltpsqg
      661 tvtlpntvde kadikdiaqa eadinnlnkk vdelwmqlnq lleqnsvsmn drsnrhqpnh
      721 qekresgcsf ltgwityrpg hfrcglests n
//
LOCUS       XP_040944425             740 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944425
VERSION     XP_040944425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088491.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..740
                     /product="rho GTPase-activating protein REN1 isoform X3"
                     /calculated_mol_wt=81444
     Region          54..160
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          216..359
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          609..688
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..740
                     /gene="LOC107910254"
                     /coded_by="XM_041088491.1:187..2409"
                     /db_xref="GeneID:107910254"
ORIGIN      
        1 matkknessq kqqrmvfkkd epskghqgda avvaspgpll qapptpksrv rnsvlksgpl
       61 flstkgigwt swkkrwfilt qtslvffksd psaipqkene vnlilggidl nisgsvvvka
      121 dkklltvlfq dgqdgrtftl kaessedlye wkaafenals qapssphvlg kndilgneka
      181 navngskdpv nnkqpvrstv lgkpillale dvdgaptfle kalrfieehg tkaegvlrla
      241 advedvkcri qeyekgktef speedphvia dcikyvirel pscpvpascc nalleayrtl
      301 ggdrvntmre avldafpepn rrllqrilmm mravasnktl nrmsssavaa cmaplilrpl
      361 vsgdceiend fnagddssiq llraaaaanh aqvivitlle eydkifgegy vppnlyygte
      421 esgseseses esesesesee aadddcndat sgsnaycdsd yvasgtgsks ghsinndldd
      481 dkdsdylsss sepsiadgdl katkklsssl hsslsendlq rsednqsnks svieanmfae
      541 fghrakrptv wgwaiakkkl smepvhfpsk eeaeierika eksdlerght eeiegnlvye
      601 aclekqkktl hghcqalqnd vsrleeelhr erdkrtalea gltpsqgtvt lpntvdekik
      661 adikdiaqae adinnlnkkv delwmqlnql leqnsvsmnd rsnrhqpnhq ekresgcsfl
      721 tgwityrpgh frcglestsn
//
LOCUS       XP_040944426             739 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944426
VERSION     XP_040944426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088492.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..739
                     /product="rho GTPase-activating protein REN1 isoform X4"
                     /calculated_mol_wt=81413
     Region          79..173
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          229..372
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          622..701
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..739
                     /gene="LOC107910254"
                     /coded_by="XM_041088492.1:187..2406"
                     /db_xref="GeneID:107910254"
ORIGIN      
        1 matkknessq kqqrmvfkkd epskghqgda avvaspgpll qapptpksrv rnsvlksgpl
       61 flstkafthi lpekytlrgi gwtswkkrwf iltqtslvff ksdpsaipqk enevnlilgg
      121 idlnisgsvv vkadkklltv lfqdgqdgrt ftlkaessed lyewkaafen alsqapssph
      181 vlgkndilgn ekanavngsk dpvnnkqpvr stvlgkpill aledvdgapt flekalrfie
      241 ehgtkaegvl rlaadvedvk criqeyekgk tefspeedph viadcikyvi relpscpvpa
      301 sccnalleay rtlggdrvnt mreavldafp epnrrllqri lmmmravasn ktlnrmsssa
      361 vaacmaplil rplvsgdcei endfnagdds siqllraaaa anhaqvivit lleeydkifg
      421 egyvppnlyy gteesgsese sesesesese seeaadddcn datsgsnayc dsdyvasgtg
      481 sksghsinnd ldddkdsdyl ssssepsiad gdlkatkkls sslhsslsen dlqrsednqs
      541 nkssvieanm faefghrakr ptvwgwaiak kklsmepvhf pskeeaeier ikaeksdler
      601 ghteeiegnl vyeaclekqk ktlhghcqal qndvsrleee lhrerdkrta leagltpsqg
      661 tvtlpntvde kikadikdia qaeadinnln kkvdelwmql nqlleqnsvs mndrsnrhqp
      721 nhqekrpghf rcglestsn
//
LOCUS       XP_016693531             727 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016693531
VERSION     XP_016693531.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838042.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693531.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..727
                     /product="rho GTPase-activating protein REN1 isoform X5"
                     /calculated_mol_wt=80142
     Region          79..173
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          229..372
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          622..701
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..727
                     /gene="LOC107910254"
                     /coded_by="XM_016838042.2:187..2370"
                     /db_xref="GeneID:107910254"
ORIGIN      
        1 matkknessq kqqrmvfkkd epskghqgda avvaspgpll qapptpksrv rnsvlksgpl
       61 flstkafthi lpekytlrgi gwtswkkrwf iltqtslvff ksdpsaipqk enevnlilgg
      121 idlnisgsvv vkadkklltv lfqdgqdgrt ftlkaessed lyewkaafen alsqapssph
      181 vlgkndilgn ekanavngsk dpvnnkqpvr stvlgkpill aledvdgapt flekalrfie
      241 ehgtkaegvl rlaadvedvk criqeyekgk tefspeedph viadcikyvi relpscpvpa
      301 sccnalleay rtlggdrvnt mreavldafp epnrrllqri lmmmravasn ktlnrmsssa
      361 vaacmaplil rplvsgdcei endfnagdds siqllraaaa anhaqvivit lleeydkifg
      421 egyvppnlyy gteesgsese sesesesese seeaadddcn datsgsnayc dsdyvasgtg
      481 sksghsinnd ldddkdsdyl ssssepsiad gdlkatkkls sslhsslsen dlqrsednqs
      541 nkssvieanm faefghrakr ptvwgwaiak kklsmepvhf pskeeaeier ikaeksdler
      601 ghteeiegnl vyeaclekqk ktlhghcqal qndvsrleee lhrerdkrta leagltpsqg
      661 tvtlpntvde kikadikdia qaeadinnln kkvdelwmql nqlleqnsvs mndrsnrhqp
      721 nhqekrd
//
LOCUS       XP_040944427             725 aa            linear   PLN 06-AUG-2024
DEFINITION  rho GTPase-activating protein REN1 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944427
VERSION     XP_040944427.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088493.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..725
                     /product="rho GTPase-activating protein REN1 isoform X6"
                     /calculated_mol_wt=79901
     Region          79..173
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     Region          229..372
                     /region_name="RhoGAP"
                     /note="RhoGAP domain; pfam00620"
                     /db_xref="CDD:459875"
     Region          622..699
                     /region_name="Lzipper-MIP1"
                     /note="Leucine-zipper of ternary complex factor MIP1;
                     pfam14389"
                     /db_xref="CDD:464163"
     CDS             1..725
                     /gene="LOC107910254"
                     /coded_by="XM_041088493.1:187..2364"
                     /db_xref="GeneID:107910254"
ORIGIN      
        1 matkknessq kqqrmvfkkd epskghqgda avvaspgpll qapptpksrv rnsvlksgpl
       61 flstkafthi lpekytlrgi gwtswkkrwf iltqtslvff ksdpsaipqk enevnlilgg
      121 idlnisgsvv vkadkklltv lfqdgqdgrt ftlkaessed lyewkaafen alsqapssph
      181 vlgkndilgn ekanavngsk dpvnnkqpvr stvlgkpill aledvdgapt flekalrfie
      241 ehgtkaegvl rlaadvedvk criqeyekgk tefspeedph viadcikyvi relpscpvpa
      301 sccnalleay rtlggdrvnt mreavldafp epnrrllqri lmmmravasn ktlnrmsssa
      361 vaacmaplil rplvsgdcei endfnagdds siqllraaaa anhaqvivit lleeydkifg
      421 egyvppnlyy gteesgsese sesesesese seeaadddcn datsgsnayc dsdyvasgtg
      481 sksghsinnd ldddkdsdyl ssssepsiad gdlkatkkls sslhsslsen dlqrsednqs
      541 nkssvieanm faefghrakr ptvwgwaiak kklsmepvhf pskeeaeier ikaeksdler
      601 ghteeiegnl vyeaclekqk ktlhghcqal qndvsrleee lhrerdkrta leagltpsqg
      661 tvtlpntvde kadikdiaqa eadinnlnkk vdelwmqlnq lleqnsvsmn drsnrhqpnh
      721 qekrd
//
LOCUS       XP_016693536             422 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693536
VERSION     XP_016693536.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838047.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693536.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..422
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48100
     CDS             1..422
                     /gene="LOC107910257"
                     /coded_by="XM_016838047.2:618..1886"
                     /db_xref="GeneID:107910257"
ORIGIN      
        1 mavhiiygll nkfhknkhka lknginlqsg arlivkvprs rvfkllarfl tvlaltlfll
       61 pwsgirfivn depalpvyti kpevvpetad pinlesllll ynhlnnegil kpgnkgllls
      121 ddydeesiqg nsfltktdme fsstndfdrl mlipdesfdf ifteniqstl efidrslkvg
      181 givavqqlds slsftkpsny kivyfrkfns nlfvmkkvqn arpipssqrr llgyntseak
      241 raalkkledv llepprassr tsrtylkrtk ylpdllgdsl esyprrvfid vglpkkdggs
      301 attwfvknyp trnlkfemyk ietltkdstk kevpqtaaet gmsgwlrknv qeeeyvvmka
      361 eaevvedmvk skairlvdel fleckpkglg grknmsrray weclalygkl rdegvavhqw
      421 wg
//
LOCUS       XP_016693539             460 aa            linear   PLN 06-AUG-2024
DEFINITION  aspartyl protease AED3 [Gossypium hirsutum].
ACCESSION   XP_016693539
VERSION     XP_016693539.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693539.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..460
                     /product="aspartyl protease AED3"
                     /calculated_mol_wt=48818
     Region          119..459
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(138,140,142,196..198,242)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133139"
     Site            138..140
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133139"
     Site            138
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133139"
     Site            order(196..199,204..207)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133139"
     CDS             1..460
                     /gene="LOC107910259"
                     /coded_by="XM_016838050.2:138..1520"
                     /db_xref="GeneID:107910259"
ORIGIN      
        1 myknplafsi lrhrnsilrs rsfgsmdfia tilflalvis stkaldpcgp qpddsdllvi
       61 piygkcspfn ppkpdssfnt vmnmaskdpa rvkylsslva qkttavpias gqqvlnigny
      121 ivrvkigtpg qlmfmvldts ndvawvpcsg cngcsattfs pntsstygsl dcglpqcaqv
      181 rglscpatgs aacsfnqsyg gdssfsanlv rdslglandi vpdfafgcin visggsvppq
      241 gllglgrgpm slisqsgaly sgvfsyclps fksyyfsgsl klgpvgqpkn irttpllksp
      301 hrpslyyvnl tgisvgrvqv piapeylafn pntgagtiid sgtvvtrfvq piykairdef
      361 vkhvkgpfta igvfdtcfda taeaeaplit lhfealsmpl pmensflhts agsraclaia
      421 pvpnnvnaam nvianlqqqn hrilfdvins rlgiareacn
//
LOCUS       XP_016693490            1069 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693490
VERSION     XP_016693490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838001.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1069
                     /product="ubiquitin carboxyl-terminal hydrolase 17 isoform
                     X1"
                     /calculated_mol_wt=117149
     Region          74..111
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          581..885
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(586,591,846,863)
                     /site_type="active"
                     /db_xref="CDD:239126"
     CDS             1..1069
                     /gene="LOC107910219"
                     /coded_by="XM_016838001.2:417..3626"
                     /db_xref="GeneID:107910219"
ORIGIN      
        1 mlfiwdlgfs slvlvlsllp ligffvrrkw qlsvarqaei krllilasee aarveleati
       61 eygtvsiswn yqqcavcycp tttrcarckg vrycsakcqi ihwrqghkee chppaiavhq
      121 nhdegsdygq kainqdqygd ryeieeksha kligtsstes alfssitgpa llssssssvv
      181 ldgkdddakv efhadregls sapesssasf sgfssaagse ssddvsvces vssneldkld
      241 gsssadvnld tfwtsvvnnv dqtnpsspkf vrlvdsvdei sklshskpdq seesqcrats
      301 ssglgvsdms egsnaeasrf ssdfwgrtle svpstsvddn esfnsyhkeg gkralldsgs
      361 slhfsftlag nasssypqvs kvkdakldda tqcattlghs klsdgvvlse nagldspneg
      421 nskslnsect nqgecgsnni qhvinpreai nidvplvgsl ssshfeksgs tvvtngpsis
      481 nashlsessd sysssdrvha vpnvksgkfd dvhanfakls qfssyssngk nglktsmwkv
      541 vdqfrvskfp khhpfgvsne gifpyesfvk lyswnkvelq prglvncgns cyanavlqcl
      601 tftppltayf lhgihskaca kkdwcftcef eklilkakdg ksplspmgil sqlqnigsql
      661 angkeedahe flryaidamq siclkeagla asgcleeett ligltfggyl rskikcmkcq
      721 gkserhekmm dltveiegni gtleealrrf trteildgen kyqcsrcksy ekakkkltil
      781 eapniltial krfqsgkfgk lnkairfpei lnlapymsgt sdkspiyrly gvvvhldimn
      841 aafsghylcy vknaqnkwfk iddsmvtste lervltkgay mllyarcspr aprlmknrsk
      901 aipssvnskn plksnsltys gldefhpsli hsdtpssies fyskynqlqr iledssssds
      961 slfsvnsdeg scctdstrds tstddlidsi fgdsvqgwns pwrscdsdaf ssssssslyl
     1021 rhspvadldr yssgspkirs srmdeegkrd dlffhsdtms kqcrkvvva
//
LOCUS       XP_016693491            1054 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 17 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693491
VERSION     XP_016693491.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838002.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1054
                     /product="ubiquitin carboxyl-terminal hydrolase 17 isoform
                     X2"
                     /calculated_mol_wt=115475
     Region          74..111
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          581..870
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(586,591,831,848)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..1054
                     /gene="LOC107910219"
                     /coded_by="XM_016838002.2:418..3582"
                     /db_xref="GeneID:107910219"
ORIGIN      
        1 mlfiwdlgfs slvlvlsllp ligffvrrkw qlsvarqaei krllilasee aarveleati
       61 eygtvsiswn yqqcavcycp tttrcarckg vrycsakcqi ihwrqghkee chppaiavhq
      121 nhdegsdygq kainqdqygd ryeieeksha kligtsstes alfssitgpa llssssssvv
      181 ldgkdddakv efhadregls sapesssasf sgfssaagse ssddvsvces vssneldkld
      241 gsssadvnld tfwtsvvnnv dqtnpsspkf vrlvdsvdei sklshskpdq seesqcrats
      301 ssglgvsdms egsnaeasrf ssdfwgrtle svpstsvddn esfnsyhkeg gkralldsgs
      361 slhfsftlag nasssypqvs kvkdakldda tqcattlghs klsdgvvlse nagldspneg
      421 nskslnsect nqgecgsnni qhvinpreai nidvplvgsl ssshfeksgs tvvtngpsis
      481 nashlsessd sysssdrvha vpnvksgkfd dvhanfakls qfssyssngk nglktsmwkv
      541 vdqfrvskfp khhpfgvsne gifpyesfvk lyswnkvelq prglvncgns cyanavlqcl
      601 tftppltayf lhgihskaca kkdwcftcef eklilkakdg ksplspmgil sqlqnigsql
      661 angkeedahe flryaidamq siclkeagla asgcleeett ligltfggyl rskikcmkcq
      721 gkserhekmm dltveiegni gtleealrrf trteildgen kyqcsrcksy ekakkkltil
      781 eapniltial krfqilnlap ymsgtsdksp iyrlygvvvh ldimnaafsg hylcyvknaq
      841 nkwfkiddsm vtstelervl tkgaymllya rcspraprlm knrskaipss vnsknplksn
      901 sltysgldef hpslihsdtp ssiesfysky nqlqrileds sssdsslfsv nsdegscctd
      961 strdststdd lidsifgdsv qgwnspwrsc dsdafsssss sslylrhspv adldryssgs
     1021 pkirssrmde egkrddlffh sdtmskqcrk vvva
//
LOCUS       XP_016693656             302 aa            linear   PLN 06-AUG-2024
DEFINITION  AT-hook motif nuclear-localized protein 17 [Gossypium hirsutum].
ACCESSION   XP_016693656
VERSION     XP_016693656.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838167.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693656.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..302
                     /product="AT-hook motif nuclear-localized protein 17"
                     /calculated_mol_wt=31384
     Region          107..221
                     /region_name="PCC"
                     /note="Plants and Prokaryotes Conserved (PCC) domain;
                     pfam03479"
                     /db_xref="CDD:460940"
     Site            order(107,109,111,114,139..140,158,165..168,170,172,185,
                     187,189,192,195,197..199,213,215,217,219)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:211390"
     CDS             1..302
                     /gene="LOC107910349"
                     /coded_by="XM_016838167.2:286..1194"
                     /db_xref="GeneID:107910349"
ORIGIN      
        1 mkgeyvdsen gnpnnmfskl hhhhhqrqnq pfshhfplsh qsqppisddp ndpsttpnss
       61 lprlgsasad gasievvrrp rgrppgsknk pkqpllfsre pnpamnpyvl eipgghdvvd
      121 aistfsrrkn igicvltgsg tvsnvtirql sstpgavitf hgrfdilsls atflppttsy
      181 qvpntfsisl agpqgqivgg fvagslvaag tvyivaatfn npsyhqlpgg gggeetrntm
      241 ssggdgegeg qsppfsgggg dstghgggse scgvsmysnn fgggsdviwa ptarpppppp
      301 py
//
LOCUS       XP_016693654             340 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693654
VERSION     XP_016693654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38085
     Region          68..130
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(97..99,107,110..111,114..115)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..340
                     /gene="LOC107910346"
                     /coded_by="XM_016838165.2:108..1130"
                     /db_xref="GeneID:107910346"
ORIGIN      
        1 megngsrada klllgiakkl lqgrhfkasr dvavlaqqtd pllegpdqil avidvvvadv
       61 krindqhdwy silqidcrsq dndliekqyh rltllldpeq nkfpfaddaf klvsdawsil
      121 snsskksvyd kefdsctrid lstagdrsyh agestvrgea qnqermqnle lrkenqrprm
      181 stfwtacpyc ymlfeypriy egcclrcqnc drafhgvliq tlpplipeke ayyctwaffp
      241 llsggqetev epppgfpdkr rgserndgre sevkappgfp ekrrgaqrng gtmalpppas
      301 aptttmkkat esidnvagis ggnvsdfapr krgkprmnpl
//
LOCUS       XP_040944429            3249 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944429
VERSION     XP_040944429.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088495.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3249
                     /product="BEACH domain-containing protein B isoform X1"
                     /calculated_mol_wt=363989
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3235
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3077..3113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3121..3153
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3160..3194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3202..3239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3249
                     /gene="LOC107910345"
                     /coded_by="XM_041088495.1:299..10048"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv avtadgsila tgshdttvmv wevlrvripe krvrnmqtdc
     3061 viaetpfhil cghddiitcl yvsveldivi sgskdgtcvf htlrdgryvr sllhpsrsal
     3121 sklvasrhgq tvlysdgdls lhlysingkh iassesngrl ncvelsgcge flvcagdqgq
     3181 ivvrsmstle vvqryngigk iitsltvtpq ecflagtkdg sllvysienp qhrkasvsrn
     3241 pktkvslag
//
LOCUS       XP_040944430            3249 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944430
VERSION     XP_040944430.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088496.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3249
                     /product="BEACH domain-containing protein B isoform X1"
                     /calculated_mol_wt=363989
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3235
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3077..3113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3121..3153
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3160..3194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3202..3239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3249
                     /gene="LOC107910345"
                     /coded_by="XM_041088496.1:299..10048"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv avtadgsila tgshdttvmv wevlrvripe krvrnmqtdc
     3061 viaetpfhil cghddiitcl yvsveldivi sgskdgtcvf htlrdgryvr sllhpsrsal
     3121 sklvasrhgq tvlysdgdls lhlysingkh iassesngrl ncvelsgcge flvcagdqgq
     3181 ivvrsmstle vvqryngigk iitsltvtpq ecflagtkdg sllvysienp qhrkasvsrn
     3241 pktkvslag
//
LOCUS       XP_040944431            3249 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944431
VERSION     XP_040944431.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088497.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3249
                     /product="BEACH domain-containing protein B isoform X1"
                     /calculated_mol_wt=363989
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3235
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3077..3113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3121..3153
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3160..3194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3202..3239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3249
                     /gene="LOC107910345"
                     /coded_by="XM_041088497.1:327..10076"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv avtadgsila tgshdttvmv wevlrvripe krvrnmqtdc
     3061 viaetpfhil cghddiitcl yvsveldivi sgskdgtcvf htlrdgryvr sllhpsrsal
     3121 sklvasrhgq tvlysdgdls lhlysingkh iassesngrl ncvelsgcge flvcagdqgq
     3181 ivvrsmstle vvqryngigk iitsltvtpq ecflagtkdg sllvysienp qhrkasvsrn
     3241 pktkvslag
//
LOCUS       XP_040944432            3249 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944432
VERSION     XP_040944432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088498.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3249
                     /product="BEACH domain-containing protein B isoform X1"
                     /calculated_mol_wt=363989
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3235
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3077..3113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3121..3153
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3160..3194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3202..3239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3249
                     /gene="LOC107910345"
                     /coded_by="XM_041088498.1:304..10053"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv avtadgsila tgshdttvmv wevlrvripe krvrnmqtdc
     3061 viaetpfhil cghddiitcl yvsveldivi sgskdgtcvf htlrdgryvr sllhpsrsal
     3121 sklvasrhgq tvlysdgdls lhlysingkh iassesngrl ncvelsgcge flvcagdqgq
     3181 ivvrsmstle vvqryngigk iitsltvtpq ecflagtkdg sllvysienp qhrkasvsrn
     3241 pktkvslag
//
LOCUS       XP_040944433            3249 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944433
VERSION     XP_040944433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088499.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3249
                     /product="BEACH domain-containing protein B isoform X1"
                     /calculated_mol_wt=363989
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3235
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3077..3113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3121..3153
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3160..3194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3202..3239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3249
                     /gene="LOC107910345"
                     /coded_by="XM_041088499.1:216..9965"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv avtadgsila tgshdttvmv wevlrvripe krvrnmqtdc
     3061 viaetpfhil cghddiitcl yvsveldivi sgskdgtcvf htlrdgryvr sllhpsrsal
     3121 sklvasrhgq tvlysdgdls lhlysingkh iassesngrl ncvelsgcge flvcagdqgq
     3181 ivvrsmstle vvqryngigk iitsltvtpq ecflagtkdg sllvysienp qhrkasvsrn
     3241 pktkvslag
//
LOCUS       XP_040944434            3247 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944434
VERSION     XP_040944434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088500.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3247
                     /product="BEACH domain-containing protein B isoform X2"
                     /calculated_mol_wt=363789
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3233
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3070
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3075..3111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3119..3151
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3158..3192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3200..3237
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3247
                     /gene="LOC107910345"
                     /coded_by="XM_041088500.1:299..10042"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv aadgsilatg shdttvmvwe vlrvripekr vrnmqtdcvi
     3061 aetpfhilcg hddiitclyv sveldivisg skdgtcvfht lrdgryvrsl lhpsrsalsk
     3121 lvasrhgqtv lysdgdlslh lysingkhia ssesngrlnc velsgcgefl vcagdqgqiv
     3181 vrsmstlevv qryngigkii tsltvtpqec flagtkdgsl lvysienpqh rkasvsrnpk
     3241 tkvslag
//
LOCUS       XP_040944435            3247 aa            linear   PLN 06-AUG-2024
DEFINITION  BEACH domain-containing protein B isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944435
VERSION     XP_040944435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088501.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..3247
                     /product="BEACH domain-containing protein B isoform X2"
                     /calculated_mol_wt=363789
     Region          651..1074
                     /region_name="Neurobeachin"
                     /note="Neurobeachin alpha solenoid region; pfam20425"
                     /db_xref="CDD:466574"
     Region          1330..1848
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <2210..2301
                     /region_name="DUF4800"
                     /note="Domain of unknown function (DUF4800); pfam16057"
                     /db_xref="CDD:464996"
     Region          2408..2559
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2595..2870
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2891..3233
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2974..3012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3018..3070
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3075..3111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3119..3151
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3158..3192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3200..3237
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3247
                     /gene="LOC107910345"
                     /coded_by="XM_041088501.1:299..10042"
                     /db_xref="GeneID:107910345"
ORIGIN      
        1 mnimkgvadl irrtssgqtg dspgaqgerl spptprirfs egndeavlss lweryentvd
       61 kaekkrsfhv flkqfltvfk nwepdnggql peaasiaeys trvndivvgc saghpaeiil
      121 tlieeigqlt tlvselntgv grtgmdfpav sisftseglp vldalkiitr slhncrvfgy
      181 yggiqkltal mkgaviqlkt vvgaipades fsnlivekmg flqrvlvyvv siiccfidln
      241 snvyekaqmy sitedfsvig amssidpdsl kdslsertlh whrkavvsvm eagglnwlve
      301 llrvirrlsm keqwtdmtlq fltlrtlsfa lcdnprgqnh fksigglevl ldgltlpsin
      361 mlllksatqv dgrreqysll kifelhvlsl evlreavfgn vnnlqflcen grvhkfansf
      421 cspafvfqey iqlmehsalp egsqtstlnl kndnaesyla epsapspeka pcnqlwndcv
      481 vklsrvlcsf llaaedvklq hgqatsgrip tsissvyael svkwvlrvll qvfpciracs
      541 nqnefpnhlw vfistlqhca lnafkkvlts sapllevfrk egiwdlifse nffyfgssse
      601 ecyegstpcp dgspkkveey sasgstgiqi lqieassfve laatsngsih nlpelsalle
      661 aleqsacnpe tasvvaksll rilqlssekt vasfktlnav srvlkvacil aheskmsgnm
      721 gpvidndyle gvlshghqrf yssqtsqcwi kcmetcmelf aefflvadda rtlvlhdstc
      781 idclfelfwe eglrnqvfry ildlmkiesl feedrkavly icskyfetft vikerekcfa
      841 elsiklligm idilqtdplh yqvlfrdgec flhvvsllng nldeaneerl vlvvlqtltc
      901 llakndaska afralvgrgy qtlqsllldf cqwhpseall nalfdmlvdg kfeingspqi
      961 knedvvilyl svlqkssesl rhyglsvfqq llkdslsnra scvaagmlnf lldwfvqecd
     1021 dsvilkiaql iqvigghsis gkdmrkifal lrsekvgtqq qycsllltci lsmlnekgpt
     1081 affdlngdds giiiktpvqw plnkgfsfsc wlrvenfpmn gtmglfkflt engrgclatl
     1141 aedkliykti nlkeqslemh vnlvrkkwhf lcithtigra fsggsllrcy ldgdlvsser
     1201 cryakvseil tscsigtkiv lprheeddpv etiqdsfpfl gqigplylfg daisseqvka
     1261 vhslgpsymy sfldsettaf gdnpmpsgil gtkdglaski vfglnaqasn gkilfnvspa
     1321 ldpvsdktlf eatimvgtql csrrllqeii ycvggisvff plitqsdrhe ngetgvlert
     1381 llfpvakerl taevielias vldenlanqq qmhllsgfsv lgfllqslpp qqlnmetlsa
     1441 lkslfnvvss ssglsellmk eaissiflnp hiwlytaymv qrelymflie qfdkdlrllk
     1501 slcqlprvid iiqqcywdsv ksrvsiggqq llhpitkqvi gerpgreeih kihllllslg
     1561 emslrqnias adikalvsff etshdmtcie dvlhmvirai sqkpllesfi eqvnllggch
     1621 ifvnllkreh epirllslqf lgrllvglps ekkgprffnl avgrskslse nskktssrmq
     1681 llffaisdrl fnfpltdnlc atlfdvllgg asprqvlqkn slvdkqksrg nnshfllpqi
     1741 lllifrylss cgdasarmki icdlldllds nplnietlme ygwnawltas vkldvvknym
     1801 sdsrhqgdye ineknlvmrv fsvvlchyiq fmkggwqqle etvnflllhc eqvgisfrcl
     1861 lcdiyenllq rlvdlsseen ifssqpcrdn tlyllqlvde mlisavgnkl pfpanssdsy
     1921 lgslevesqk eydsllhevl qgefddkvsg nmesygqavt sgediptdnw wnlvdniwvv
     1981 isemngmgps ktrlrnsasv gpslgqrarg lveslnipaa emaavvsggi gnalsgkpnk
     2041 nvdkamalrg ercprivfrl lilylcrssl eralrcvqqf tsllpcflat ddeqsksrlq
     2101 lfiwsllvvr sqygmldngg rfhviahvir etinsgksml atsmvardds fdsssysket
     2161 gsihnliqkd rllsavsdes kyvktlehdr srqlqelrat mgenssleih nqtafedeiq
     2221 sslhtilasd errraaflla qeeqqqnvae kwmhmlrtli dergpwsanp fpngsvihwk
     2281 ldktedtwrr rlklrrnyhf dekmchppst spsneaslps seskssfvgh ipeqmkqfll
     2341 qgvrritdeg sselvesgae psvqsviled psdshsvevv ktindqmdiv qdrkefsaps
     2401 peteinevvm slpcvlvtpk rklagqlavm kdvlhffgef mvegtvgssv fknlnasghf
     2461 ergdlkpkst kwsvpldins ekgtsdnvea enlhkeqlkn vkryrrwsig kikavhwtry
     2521 llrytaieif fsdsiaplfi nfasqkdake igtlivstrn elllrrgssr drndpisfvd
     2581 rrvalemaet areswrrrdi tnfeylmiln tlagrsyndl tqypvfpwil adyssefldf
     2641 nksstfrdls kpvgaldskr fevfedryrn fcdpdipsfy ygshyssmgi vlyyllrlep
     2701 ftslhrnlqg gkfdhadrlf qsiestyrnc lsntsdvkel ipefyympef linsnsyhlg
     2761 vkqdgepind vslppwakgs telfviknre aleseyvssn lhhwidlvfg ykqrgkpave
     2821 aanvfyylty egavdldsmd delqksaied qianfgqtpi qifrkrhprr gppipiahpl
     2881 yfapasinlt svlscisypp savlyvglld svivivnqgl tlsvkmwltt qlqsggnftf
     2941 sgsqdpffgv gsdiisprki gsplaenvel gaqcfaimqt paenfliscg nwensfqvis
     3001 lsdgrmvqsv rhhkdvvscv aadgsilatg shdttvmvwe vlrvripekr vrnmqtdcvi
     3061 aetpfhilcg hddiitclyv sveldivisg skdgtcvfht lrdgryvrsl lhpsrsalsk
     3121 lvasrhgqtv lysdgdlslh lysingkhia ssesngrlnc velsgcgefl vcagdqgqiv
     3181 vrsmstlevv qryngigkii tsltvtpqec flagtkdgsl lvysienpqh rkasvsrnpk
     3241 tkvslag
//
LOCUS       XP_040944436             285 aa            linear   PLN 06-AUG-2024
DEFINITION  GATA transcription factor 25 [Gossypium hirsutum].
ACCESSION   XP_040944436
VERSION     XP_040944436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088502.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="GATA transcription factor 25"
                     /calculated_mol_wt=30547
     Region          66..97
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          130..173
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     Region          195..241
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     CDS             1..285
                     /gene="LOC107910343"
                     /coded_by="XM_041088502.1:139..996"
                     /db_xref="GeneID:107910343"
ORIGIN      
        1 mygqsqpmni pasiadndvs asapadsvsy dahplddgvg vddvsadply vtstpsdlai
       61 vqrvdgasql tlsfrgqvyv fdaitpekfh avllllggse ltsgphgvem saqnqrvvld
      121 fprgsnqphr aasldrfrqk rkercfdkkv rysvrqeval rmqrnkgqft sakksegahs
      181 wgssqeddnl adgicthcgi sskstpmmrr gpsgprslcn acglfwankg tlrdipkktq
      241 dlslvpvqqg ecetndsnsg taipttqsnv vsfsngdgsa liaen
//
LOCUS       XP_016693653             514 aa            linear   PLN 06-AUG-2024
DEFINITION  serine hydroxymethyltransferase 2, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016693653
VERSION     XP_016693653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..514
                     /product="serine hydroxymethyltransferase 2,
                     mitochondrial"
                     /calculated_mol_wt=56823
     Region          44..514
                     /region_name="PLN03226"
                     /note="serine hydroxymethyltransferase; Provisional"
                     /db_xref="CDD:215639"
     Site            order(56,58,65..66,75,80,98,116..117,125,144,151,191..192,
                     330,348)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:99733"
     Site            order(79,99,109,146..147,174,229,254,257,282..283,289,427)
                     /site_type="other"
                     /note="glycine-pyridoxal phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99733"
     Site            order(79,174,283,427)
                     /site_type="active"
                     /db_xref="CDD:99733"
     Site            order(101,108,169,173,175,322,412)
                     /site_type="other"
                     /note="folate binding site [chemical binding]"
                     /db_xref="CDD:99733"
     CDS             1..514
                     /gene="LOC107910342"
                     /coded_by="XM_016838164.2:184..1728"
                     /db_xref="GeneID:107910342"
ORIGIN      
        1 mavamsfrrl sssikspirp lfsgsslyym staaaekeka ranwihqlna pleeidpeia
       61 niielekarq wkglelipse nftslsvmqa vgsvmtnkys egypgaryyg gneyidmaes
      121 lcqtraleaf gldpakwgvn vqslsgspan fqvytallkp herimaldlp hgghlshgyq
      181 tdtkkisavs iffetmpyrl nestgyidyd qleksavlfr pklivagasa yarlydyari
      241 rkvcdkqkai mladmahisg lvaagvipsp feyadvvttt thkslrgprg amiffrkgvk
      301 einkqgkevm ydledkinqa vfpglqggph nhtiaglava lkqvrtpeyk ayqeqvlsnc
      361 skfsqrllen gyelvsggte nhlvlvnlrn kgidgsrvek vlesvhiaan kntvpgdvsa
      421 mvpggirmgt paltsrgfie edfekvadff daavklalki kaqtegtklk dfvatlqsdt
      481 nfqseiaklr qeveeyakqf ptigfekeam kykd
//
LOCUS       XP_016693652             391 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,4-xylosyltransferase IRX9H [Gossypium hirsutum].
ACCESSION   XP_016693652
VERSION     XP_016693652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="probable beta-1,4-xylosyltransferase IRX9H"
                     /calculated_mol_wt=44689
     Region          140..369
                     /region_name="GlcAT-I"
                     /note="Beta1,3-glucuronyltransferase I (GlcAT-I) is
                     involved in the initial steps of proteoglycan synthesis;
                     cd00218"
                     /db_xref="CDD:132995"
     Site            order(147,177,235..238,272,288,294,299,336,364)
                     /site_type="active"
                     /db_xref="CDD:132995"
     Site            order(150..151,153..155,157..158,161..162,164..165,239,
                     241..243,261,270..271,285,287,360,363,365,367..368)
                     /site_type="active"
                     /note="putative dimerization interface [active]"
                     /db_xref="CDD:132995"
     Site            235..237
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:132995"
     CDS             1..391
                     /gene="LOC107910341"
                     /coded_by="XM_016838163.2:241..1416"
                     /db_xref="GeneID:107910341"
ORIGIN      
        1 masirrtlsp ayhdrsyqng agfsspsnkf lpdgsskhfs ssshlpflfn avnivyrkgw
       61 rrsfcrclff fvigfvfgia pfgysdtdvr akdftfpelk pphanlrfgd qivtsvslsv
      121 ntkllepkes tdiieplkql ivvtptynrg fqayflnrlg qvlrlvklpl vwivveekaa
      181 shetaeilrk tgvmyrhvlc afnssslkdp rvhqrnaale hierhkldgi vffadddnvy
      241 tlelfeslrt isrfgtwpva mlaqsknkai legpvcnasq vigwhtndks krlrrfyadm
      301 sgfafnssil wdskrwacpf snpirqldtv kegfqestyi eqvvedesqm egiphgcsri
      361 mnwhlhldtd nlfypkgwll eknlevilpi k
//
LOCUS       XP_016693651             103 aa            linear   PLN 06-AUG-2024
DEFINITION  factor of DNA methylation 1 [Gossypium hirsutum].
ACCESSION   XP_016693651
VERSION     XP_016693651.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838162.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693651.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..103
                     /product="factor of DNA methylation 1"
                     /calculated_mol_wt=12087
     Region          53..>102
                     /region_name="XH"
                     /note="XH domain; pfam03469"
                     /db_xref="CDD:460934"
     CDS             1..103
                     /gene="LOC107910339"
                     /coded_by="XM_016838162.2:1428..1739"
                     /db_xref="GeneID:107910339"
ORIGIN      
        1 mhlgrnlthg dnfavkrmrk ltqrrvvdyt stvvrymqgl pellgirtni glkrmgeldp
       61 ktfhdtcksr fppdeveiqa ttlysswqen lknpywhpif rrn
//
LOCUS       XP_016693647             313 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific demethylase JMJ25 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693647
VERSION     XP_016693647.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838158.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..313
                     /product="lysine-specific demethylase JMJ25 isoform X1"
                     /calculated_mol_wt=35876
     Region          <267..>308
                     /region_name="MBT"
                     /note="malignant brain tumor (MBT) repeat; cl45897"
                     /db_xref="CDD:459242"
     CDS             1..313
                     /gene="LOC107910338"
                     /coded_by="XM_016838158.2:639..1580"
                     /db_xref="GeneID:107910338"
ORIGIN      
        1 mvsviddddr vywyhlmlfd tkeklvvfvi dncntsivnf hrscpdclyd lciscchelr
       61 kgsqpggnea ksshqlsakr vnsramgsdd qipavaarnd wraeedgrip cppngkggcg
      121 retlslrrlf etnsveqliq saeeltinfq lpdiefsqgc slcqttcsag neaknfevrq
      181 aahrekshdn fvycpnvmql ednsiqhfqt hwmrgepviv rnvlekssgl sweplvmwra
      241 figakkilke eakrvkaidc ldwcevlfwi rsiekfgfkn flrvedidtf mwcnimhldn
      301 vvimwcttny vfg
//
LOCUS       XP_016693648             313 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific demethylase JMJ25 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693648
VERSION     XP_016693648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838159.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..313
                     /product="lysine-specific demethylase JMJ25 isoform X1"
                     /calculated_mol_wt=35876
     Region          <267..>308
                     /region_name="MBT"
                     /note="malignant brain tumor (MBT) repeat; cl45897"
                     /db_xref="CDD:459242"
     CDS             1..313
                     /gene="LOC107910338"
                     /coded_by="XM_016838159.2:568..1509"
                     /db_xref="GeneID:107910338"
ORIGIN      
        1 mvsviddddr vywyhlmlfd tkeklvvfvi dncntsivnf hrscpdclyd lciscchelr
       61 kgsqpggnea ksshqlsakr vnsramgsdd qipavaarnd wraeedgrip cppngkggcg
      121 retlslrrlf etnsveqliq saeeltinfq lpdiefsqgc slcqttcsag neaknfevrq
      181 aahrekshdn fvycpnvmql ednsiqhfqt hwmrgepviv rnvlekssgl sweplvmwra
      241 figakkilke eakrvkaidc ldwcevlfwi rsiekfgfkn flrvedidtf mwcnimhldn
      301 vvimwcttny vfg
//
LOCUS       XP_016693649             313 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific demethylase JMJ25 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693649
VERSION     XP_016693649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..313
                     /product="lysine-specific demethylase JMJ25 isoform X1"
                     /calculated_mol_wt=35876
     Region          <267..>308
                     /region_name="MBT"
                     /note="malignant brain tumor (MBT) repeat; cl45897"
                     /db_xref="CDD:459242"
     CDS             1..313
                     /gene="LOC107910338"
                     /coded_by="XM_016838160.2:470..1411"
                     /db_xref="GeneID:107910338"
ORIGIN      
        1 mvsviddddr vywyhlmlfd tkeklvvfvi dncntsivnf hrscpdclyd lciscchelr
       61 kgsqpggnea ksshqlsakr vnsramgsdd qipavaarnd wraeedgrip cppngkggcg
      121 retlslrrlf etnsveqliq saeeltinfq lpdiefsqgc slcqttcsag neaknfevrq
      181 aahrekshdn fvycpnvmql ednsiqhfqt hwmrgepviv rnvlekssgl sweplvmwra
      241 figakkilke eakrvkaidc ldwcevlfwi rsiekfgfkn flrvedidtf mwcnimhldn
      301 vvimwcttny vfg
//
LOCUS       XP_016693650             296 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific demethylase JMJ25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693650
VERSION     XP_016693650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="lysine-specific demethylase JMJ25 isoform X2"
                     /calculated_mol_wt=33715
     Region          <250..>291
                     /region_name="MBT"
                     /note="malignant brain tumor (MBT) repeat; cl45897"
                     /db_xref="CDD:459242"
     CDS             1..296
                     /gene="LOC107910338"
                     /coded_by="XM_016838161.2:639..1529"
                     /db_xref="GeneID:107910338"
ORIGIN      
        1 mvsviddddr vycdncntsi vnfhrscpdc lydlciscch elrkgsqpgg neaksshqls
       61 akrvnsramg sddqipavaa rndwraeedg ripcppngkg gcgretlslr rlfetnsveq
      121 liqsaeelti nfqlpdiefs qgcslcqttc sagneaknfe vrqaahreks hdnfvycpnv
      181 mqlednsiqh fqthwmrgep vivrnvleks sglsweplvm wrafigakki lkeeakrvka
      241 idcldwcevl fwirsiekfg fknflrvedi dtfmwcnimh ldnvvimwct tnyvfg
//
LOCUS       XP_040944438             296 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific demethylase JMJ25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944438
VERSION     XP_040944438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088504.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="lysine-specific demethylase JMJ25 isoform X2"
                     /calculated_mol_wt=33715
     Region          <250..>291
                     /region_name="MBT"
                     /note="malignant brain tumor (MBT) repeat; cl45897"
                     /db_xref="CDD:459242"
     CDS             1..296
                     /gene="LOC107910338"
                     /coded_by="XM_041088504.1:466..1356"
                     /db_xref="GeneID:107910338"
ORIGIN      
        1 mvsviddddr vycdncntsi vnfhrscpdc lydlciscch elrkgsqpgg neaksshqls
       61 akrvnsramg sddqipavaa rndwraeedg ripcppngkg gcgretlslr rlfetnsveq
      121 liqsaeelti nfqlpdiefs qgcslcqttc sagneaknfe vrqaahreks hdnfvycpnv
      181 mqlednsiqh fqthwmrgep vivrnvleks sglsweplvm wrafigakki lkeeakrvka
      241 idcldwcevl fwirsiekfg fknflrvedi dtfmwcnimh ldnvvimwct tnyvfg
//
LOCUS       XP_040944439             975 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase 7 [Gossypium hirsutum].
ACCESSION   XP_040944439
VERSION     XP_040944439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088505.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..975
                     /product="receptor-like protein kinase 7"
                     /calculated_mol_wt=108445
     Region          8..947
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          69..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..262
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          286..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..405
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          406..429
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          430..453
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          454..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          478..501
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          502..525
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          526..548
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          549..567
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..975
                     /gene="LOC107910336"
                     /coded_by="XM_041088505.1:131..3058"
                     /db_xref="GeneID:107910336"
ORIGIN      
        1 mssygqillc fglmfcfylp ccvksdelqi lldltsalne sntnvldswe atssvcsfng
       61 itcnaqgfvk eielshqnll gvlpldsicq lkyldklslg fnllygeite elgnclklqy
      121 ldlgnnfftg sfpdisslsn lqylylngsg fsgtfpwksl dnttnlavls igdnpfdrme
      181 fpdqilklkk lywlymancs iegkippaig nltelielel qynylsgeip aeigklhklw
      241 qlelynnelt gklpvglrnl tkleffdasa nnlegdisev ryltnlislq lfenkfsgev
      301 ppelgefkkl vnlslytnll tgplpqklgs raefnyidvs enfltgpipp dmckkgtmra
      361 vlmlqnkfsg eipanyasct tlkrfrvsnn sltgivpari wglpevdiid vaynqlegpi
      421 tsdiknakqm gilsaeynrf sgelpeeise akslvrieln dnqfsgkiph gigelkrlsn
      481 lnlqnnrlsg sipdslgsca sisninmadn vlsgkipssl gslptlnsln lsgnqlsgki
      541 peslsllkln lvdlsynrlt gpipnsffie ayngsftgnp glcsptirhf kqcqpdsams
      601 kdthtfivwf tlgatvllvs lgcflyvrrk ekdnslslke eswnvksfhv ltfteyeild
      661 svkqdnligk ggsgnvykvt lpngvelavk hirkshrksl stsavfsksa gkekefdmev
      721 qtlssirhvn vvklycsits edscllvyey lrngslwdrl htskkmeldw dtryeiavga
      781 akgldylhhg cerpvihrdv kssnilldef mkpriadfgl akivqsngak dsthviagty
      841 gyiapeygyt ykvneksdvy sfgvvlmelv sgkrpiepef gdnkdivswv cskinneesv
      901 lsivdpripe vlkedaikvl rvailcttrl pairptmrtv vqmleeakpc klvgiviske
      961 gehkikeadk fnlll
//
LOCUS       XP_016693646             956 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein-tyrosine kinase CEPR1 [Gossypium hirsutum].
ACCESSION   XP_016693646
VERSION     XP_016693646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838157.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..956
                     /product="receptor protein-tyrosine kinase CEPR1"
                     /calculated_mol_wt=106419
     Region          9..941
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          69..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..287
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          288..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..359
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          384..407
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          408..431
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          432..455
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          456..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          504..525
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..956
                     /gene="LOC107910334"
                     /coded_by="XM_016838157.2:210..3080"
                     /db_xref="GeneID:107910334"
ORIGIN      
        1 maskadflll avlfsfmfls cramkhdqsk ffnlmkasls gkalsdwdvi ggkpycnftg
       61 vncndrgyve vlnftgwsls gifpddvcfh lpelrvldis rnnfhgnfln givncsslev
      121 fnmssiylrt klpdfsklvs lrvldlsynr figdfpmsit nltnlevlyf nendklkpwq
      181 lpdnisrlsk lrimvfttcm lygripasig nvtslvdlel sgnflsgqip kelgllknlk
      241 qlelyynqyl sgtipeelgn ltelidldms vnrlsgnipv sicrlpklqf lqiynnsltg
      301 eipgeiaest tltilslygn ylsgqvprnl grsapmiald lsennitgpi paevcrggkl
      361 lyllmldnkl sgnlpesyan cksllrfrvs nnhlegwihe glfglphvsi idladnsftg
      421 rfpnsfgnar nlselflqnn kvsgflppgi sgavnlvkid lsnnllsgsi psqignlknl
      481 nllmlqgnnl ssgipesfsl lkslnvldls nnhltgnipe slrellpnsm nfsnnqlsgp
      541 iplslikggl vesfsgnpgl capihvqnfp icshfynekk lnsmwaiivs vlaitiaavl
      601 llkrrlskqr avmehdetls ssffsydvks fhricfnqhe ileamvdkni vghggsgtvy
      661 rielqnghvv avkklwskty kdsgskdqlv fdkglkteve tlgnirhkni vklhsyfsnl
      721 dcnllvyeym lngnlwdalh ngrfdldwpi rhrialgvaq glaylhhdil ppiihrdiks
      781 tnilldvdyh pkvadfgiak vlqarggkds tttviagtyg ylapeyaysn kattkcdvys
      841 fgvvlmelit gkkpvetdfg enknivlwis akletkegvv evldkklskt fkeemvkvlr
      901 iamrctsknt sqrptmnevv qlliesepfr ldsscespsk ikeaanvnki knqsdi
//
LOCUS       XP_016693643             380 aa            linear   PLN 06-AUG-2024
DEFINITION  putative lipase YDL109C [Gossypium hirsutum].
ACCESSION   XP_016693643
VERSION     XP_016693643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838154.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..380
                     /product="putative lipase YDL109C"
                     /calculated_mol_wt=42857
     Region          38..274
                     /region_name="DUF676"
                     /note="Putative serine esterase (DUF676); pfam05057"
                     /db_xref="CDD:309968"
     CDS             1..380
                     /gene="LOC107910331"
                     /coded_by="XM_016838154.2:295..1437"
                     /db_xref="GeneID:107910331"
ORIGIN      
        1 mktkknrrsl sfprfgclrt kshenggvdm evqfqgernn pthlvimvng iigsaqnwrf
       61 aakqllkkyp envivhcser nsstltfdgv dvmgdrlaee vkhvischps vqkisfvghs
      121 lgglvaryai arlyeqdltq etsqtngdcg tdhlgdkdlc pegqlkgkia glepmnfitf
      181 asphlgslwh kqvplfrgsr alekfaaris wllgrtgkhl fltdgkdgkp plllrmvndc
      241 edlkfisalg sfrrrvayan arfdhivgws tsslrrrnel pkikhlprsd ryphvinvep
      301 aktatldeip teakingdek inmeeemirg ltklswervd vyfkgsrqri lahstiqvks
      361 ywvnsdgadv vqhmidnfll
//
LOCUS       XP_040944440             350 aa            linear   PLN 06-AUG-2024
DEFINITION  homeotic protein knotted-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944440
VERSION     XP_040944440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088506.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="homeotic protein knotted-1 isoform X1"
                     /calculated_mol_wt=40254
     Region          49..87
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          106..146
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          231..252
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          272..310
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..350
                     /gene="LOC107910330"
                     /coded_by="XM_041088506.1:537..1589"
                     /db_xref="GeneID:107910330"
ORIGIN      
        1 meefnrvngn sipkgnfvya spvvatetnt sqnppklhll rdqqeaedmk akiiahphcs
       61 nlfeaymdcq kvgappevaa rlaaarqefe arrrsavsst rdtikdpeld qfmeayygml
      121 vkyrdelmrp mqealdftrr teaqlnrvsn glvqifnsvi vhkyvpgeiv lphtnsygyg
      181 kdarllyprt mdveyvrsye kcdgvgssee eennnhsnge tktnpraedr elknqllrky
      241 rgylsslkqe lskkkkkgkl pkesrqkllt wwelhykwpy psetekvala estgldqkqi
      301 nnwfinqrkr hwkpsedsqf mvmdglhspn avlymdghym gggpyrpgps
//
LOCUS       XP_016693642             310 aa            linear   PLN 06-AUG-2024
DEFINITION  homeotic protein knotted-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693642
VERSION     XP_016693642.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838153.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693642.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..310
                     /product="homeotic protein knotted-1 isoform X2"
                     /calculated_mol_wt=35586
     Region          49..87
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          106..146
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          191..212
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          232..270
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..310
                     /gene="LOC107910330"
                     /coded_by="XM_016838153.2:516..1448"
                     /db_xref="GeneID:107910330"
ORIGIN      
        1 meefnrvngn sipkgnfvya spvvatetnt sqnppklhll rdqqeaedmk akiiahphcs
       61 nlfeaymdcq kvgappevaa rlaaarqefe arrrsavsst rdtikdpeld qfmeayygml
      121 vkyrdelmrp mqealdftrr teaqlnrvsn glvqifnsde kcdgvgssee eennnhsnge
      181 tktnpraedr elknqllrky rgylsslkqe lskkkkkgkl pkesrqkllt wwelhykwpy
      241 psetekvala estgldqkqi nnwfinqrkr hwkpsedsqf mvmdglhspn avlymdghym
      301 gggpyrpgps
//
LOCUS       XP_040944441             256 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HAT22 [Gossypium hirsutum].
ACCESSION   XP_040944441
VERSION     XP_040944441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088507.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="homeobox-leucine zipper protein HAT22"
                     /calculated_mol_wt=28751
     Region          110..166
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(111..115,117,134,140,153,155..156,159..160,162..164,
                     166..167)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(113,116,156,159..160,163)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          168..210
                     /region_name="HALZ"
                     /note="homeobox associated leucin zipper; smart00340"
                     /db_xref="CDD:128634"
     CDS             1..256
                     /gene="LOC107910329"
                     /coded_by="XM_041088507.1:308..1078"
                     /db_xref="GeneID:107910329"
ORIGIN      
        1 mgfddicnta lglglgclvk qenisqldhh qqkkkqlflk hdhfspslls lapsydtcai
       61 idahqqqass lsaassfsns svkrerdlgg eevelerics rvsdeddegs prkklrltre
      121 qssiledkfk qhstlspkqk qalaeelnlr prqvevwfqn rrartklkqt evncellkkc
      181 yetlteenkr lqkeveelks lkvtapcymq vgaatltmcp scervdnvge npsttlftlg
      241 qkshfitpft hpsaac
//
LOCUS       XP_016693637             227 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein, partial [Gossypium hirsutum].
ACCESSION   XP_016693637
VERSION     XP_016693637.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838148.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693637.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..227
                     /product="uncharacterized protein"
     CDS             1..227
                     /gene="LOC107910327"
                     /coded_by="XM_016838148.2:<1..684"
                     /db_xref="GeneID:107910327"
ORIGIN      
        1 lpklignisp keldfectdl siwkealssy ksriqslnkp nlisldefyt hdlpsllrqr
       61 npnpfittae lsrlmqwklt rgklrprlln fvsslddssv qsvsqkafls lpdiskaisq
      121 ltvlkgvgpa tasavlaaya petapfmsde amvaalgssk dyslkqyllf veklqskske
      181 lssmgdsfkp sdveralwss avgvklqssq tapdnkikgs nkrkrkh
//
LOCUS       XP_016691022             188 aa            linear   PLN 06-AUG-2024
DEFINITION  amino acid transporter AVT6B [Gossypium hirsutum].
ACCESSION   XP_016691022
VERSION     XP_016691022.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835533.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..188
                     /product="amino acid transporter AVT6B"
                     /calculated_mol_wt=20509
     Region          <1..173
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..188
                     /gene="LOC107908345"
                     /coded_by="XM_016835533.2:212..778"
                     /db_xref="GeneID:107908345"
ORIGIN      
        1 mklivrkslm fcsslyiats ffgvvlfgnh ilddvlanfd gdlgipyssl lddlirvsyg
       61 lhlmlvfpiv fsslrlnvdg llfpyaipia fsekrffsmt valmgfifmg anfipsiwda
      121 fqftdataaa cvgsifpaai tlrdtngiat kkdrliswmm iflavststv avtsdiygil
      181 tvdkgvit
//
LOCUS       XP_016693628             569 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693628
VERSION     XP_016693628.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693628.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..569
                     /product="growth-regulating factor 1 isoform X1"
                     /calculated_mol_wt=61564
     Region          145..179
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          216..257
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..569
                     /gene="LOC107910325"
                     /coded_by="XM_016838139.2:333..2042"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mdfgvvgleg ivgsetsngf tlvasesetk qklygsaflk qersgssedd wrtsklakfd
       61 disaskavls qhrntlfrsn tsiffdgqqq qqmlsfsapk sealsmgrss qnvtfpyfhl
      121 tspactrntg yntggfngan mnggpftssq wmelehqali ykymaanvpi pstllipirk
      181 aldsagfssf sggllrpnts vgwgafhlgf snntdpepgr crrtdgkkwr csrdavadqk
      241 ycerhmnrgr hrsrkpvegq sgrstasttt tttklmhsgs sssasvvgpn ggngesnslt
      301 iaqqqfknlq pagesnlshs gplnrwllnk esigermhdt apgnefgvvs sesllnpshk
      361 ssslvkcinf gcsqdldsqe teshrsvrqf fdawpktqsd cssiflpead vqsdrtqlsi
      421 smpmalsdfm sstsspnned vthsplqlwr eldpiqmgle vgsvgnetnw rqanwipisr
      481 etsvggplge vlhstnsssa ecknssalnl mtekcdhspr lglsptgvlq ktmfgshsns
      541 sagsspraen nkndllgsti vhssslpal
//
LOCUS       XP_016693629             568 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693629
VERSION     XP_016693629.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693629.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..568
                     /product="growth-regulating factor 1 isoform X2"
                     /calculated_mol_wt=61491
     Region          145..179
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          215..256
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..568
                     /gene="LOC107910325"
                     /coded_by="XM_016838140.2:333..2039"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mdfgvvgleg ivgsetsngf tlvasesetk qklygsaflk qersgssedd wrtsklakfd
       61 disaskavls qhrntlfrsn tsiffdgqqq qqmlsfsapk sealsmgrss qnvtfpyfhl
      121 tspactrntg yntggfngan mnggpftssq wmelehqali ykymaanvpi pstllipirk
      181 aldsagfssf sggllrpntl gwgafhlgfs nntdpepgrc rrtdgkkwrc srdavadqky
      241 cerhmnrgrh rsrkpvegqs grstastttt ttklmhsgss ssasvvgpng gngesnslti
      301 aqqqfknlqp agesnlshsg plnrwllnke sigermhdta pgnefgvvss esllnpshks
      361 sslvkcinfg csqdldsqet eshrsvrqff dawpktqsdc ssiflpeadv qsdrtqlsis
      421 mpmalsdfms stsspnnedv thsplqlwre ldpiqmglev gsvgnetnwr qanwipisre
      481 tsvggplgev lhstnsssae cknssalnlm tekcdhsprl glsptgvlqk tmfgshsnss
      541 agsspraenn kndllgstiv hssslpal
//
LOCUS       XP_016693630             563 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693630
VERSION     XP_016693630.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693630.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="growth-regulating factor 1 isoform X3"
                     /calculated_mol_wt=61527
     Region          139..173
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          210..251
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..563
                     /gene="LOC107910325"
                     /coded_by="XM_016838141.2:1139..2830"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mrffcqwdan nllsyilwke setkqklygs aflkqersgs seddwrtskl akfddisask
       61 avlsqhrntl frsntsiffd gqqqqqmlsf sapksealsm grssqnvtfp yfhltspact
      121 rntgyntggf nganmnggpf tssqwmeleh qaliykymaa nvpipstlli pirkaldsag
      181 fssfsggllr pntsvgwgaf hlgfsnntdp epgrcrrtdg kkwrcsrdav adqkycerhm
      241 nrgrhrsrkp vegqsgrsta sttttttklm hsgssssasv vgpnggnges nsltiaqqqf
      301 knlqpagesn lshsgplnrw llnkesiger mhdtapgnef gvvsseslln pshkssslvk
      361 cinfgcsqdl dsqeteshrs vrqffdawpk tqsdcssifl peadvqsdrt qlsismpmal
      421 sdfmsstssp nnedvthspl qlwreldpiq mglevgsvgn etnwrqanwi pisretsvgg
      481 plgevlhstn sssaecknss alnlmtekcd hsprlglspt gvlqktmfgs hsnssagssp
      541 raennkndll gstivhsssl pal
//
LOCUS       XP_016693631             563 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693631
VERSION     XP_016693631.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693631.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="growth-regulating factor 1 isoform X3"
                     /calculated_mol_wt=61527
     Region          139..173
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          210..251
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..563
                     /gene="LOC107910325"
                     /coded_by="XM_016838142.2:1081..2772"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mrffcqwdan nllsyilwke setkqklygs aflkqersgs seddwrtskl akfddisask
       61 avlsqhrntl frsntsiffd gqqqqqmlsf sapksealsm grssqnvtfp yfhltspact
      121 rntgyntggf nganmnggpf tssqwmeleh qaliykymaa nvpipstlli pirkaldsag
      181 fssfsggllr pntsvgwgaf hlgfsnntdp epgrcrrtdg kkwrcsrdav adqkycerhm
      241 nrgrhrsrkp vegqsgrsta sttttttklm hsgssssasv vgpnggnges nsltiaqqqf
      301 knlqpagesn lshsgplnrw llnkesiger mhdtapgnef gvvsseslln pshkssslvk
      361 cinfgcsqdl dsqeteshrs vrqffdawpk tqsdcssifl peadvqsdrt qlsismpmal
      421 sdfmsstssp nnedvthspl qlwreldpiq mglevgsvgn etnwrqanwi pisretsvgg
      481 plgevlhstn sssaecknss alnlmtekcd hsprlglspt gvlqktmfgs hsnssagssp
      541 raennkndll gstivhsssl pal
//
LOCUS       XP_016693632             563 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693632
VERSION     XP_016693632.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693632.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="growth-regulating factor 1 isoform X3"
                     /calculated_mol_wt=61527
     Region          139..173
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          210..251
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..563
                     /gene="LOC107910325"
                     /coded_by="XM_016838143.2:1097..2788"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mrffcqwdan nllsyilwke setkqklygs aflkqersgs seddwrtskl akfddisask
       61 avlsqhrntl frsntsiffd gqqqqqmlsf sapksealsm grssqnvtfp yfhltspact
      121 rntgyntggf nganmnggpf tssqwmeleh qaliykymaa nvpipstlli pirkaldsag
      181 fssfsggllr pntsvgwgaf hlgfsnntdp epgrcrrtdg kkwrcsrdav adqkycerhm
      241 nrgrhrsrkp vegqsgrsta sttttttklm hsgssssasv vgpnggnges nsltiaqqqf
      301 knlqpagesn lshsgplnrw llnkesiger mhdtapgnef gvvsseslln pshkssslvk
      361 cinfgcsqdl dsqeteshrs vrqffdawpk tqsdcssifl peadvqsdrt qlsismpmal
      421 sdfmsstssp nnedvthspl qlwreldpiq mglevgsvgn etnwrqanwi pisretsvgg
      481 plgevlhstn sssaecknss alnlmtekcd hsprlglspt gvlqktmfgs hsnssagssp
      541 raennkndll gstivhsssl pal
//
LOCUS       XP_040944443             563 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944443
VERSION     XP_040944443.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088509.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="growth-regulating factor 1 isoform X3"
                     /calculated_mol_wt=61527
     Region          139..173
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          210..251
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..563
                     /gene="LOC107910325"
                     /coded_by="XM_041088509.1:1092..2783"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mrffcqwdan nllsyilwke setkqklygs aflkqersgs seddwrtskl akfddisask
       61 avlsqhrntl frsntsiffd gqqqqqmlsf sapksealsm grssqnvtfp yfhltspact
      121 rntgyntggf nganmnggpf tssqwmeleh qaliykymaa nvpipstlli pirkaldsag
      181 fssfsggllr pntsvgwgaf hlgfsnntdp epgrcrrtdg kkwrcsrdav adqkycerhm
      241 nrgrhrsrkp vegqsgrsta sttttttklm hsgssssasv vgpnggnges nsltiaqqqf
      301 knlqpagesn lshsgplnrw llnkesiger mhdtapgnef gvvsseslln pshkssslvk
      361 cinfgcsqdl dsqeteshrs vrqffdawpk tqsdcssifl peadvqsdrt qlsismpmal
      421 sdfmsstssp nnedvthspl qlwreldpiq mglevgsvgn etnwrqanwi pisretsvgg
      481 plgevlhstn sssaecknss alnlmtekcd hsprlglspt gvlqktmfgs hsnssagssp
      541 raennkndll gstivhsssl pal
//
LOCUS       XP_040944444             477 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 6 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944444
VERSION     XP_040944444.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088510.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="growth-regulating factor 6 isoform X4"
                     /calculated_mol_wt=51425
     Region          53..87
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          124..165
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..477
                     /gene="LOC107910325"
                     /coded_by="XM_041088510.1:1428..2861"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mlsfsapkse alsmgrssqn vtfpyfhlts pactrntgyn tggfnganmn ggpftssqwm
       61 elehqaliyk ymaanvpips tllipirkal dsagfssfsg gllrpntsvg wgafhlgfsn
      121 ntdpepgrcr rtdgkkwrcs rdavadqkyc erhmnrgrhr srkpvegqsg rstasttttt
      181 tklmhsgsss sasvvgpngg ngesnsltia qqqfknlqpa gesnlshsgp lnrwllnkes
      241 igermhdtap gnefgvvsse sllnpshkss slvkcinfgc sqdldsqete shrsvrqffd
      301 awpktqsdcs siflpeadvq sdrtqlsism pmalsdfmss tsspnnedvt hsplqlwrel
      361 dpiqmglevg svgnetnwrq anwipisret svggplgevl hstnsssaec knssalnlmt
      421 ekcdhsprlg lsptgvlqkt mfgshsnssa gsspraennk ndllgstivh ssslpal
//
LOCUS       XP_040944445             477 aa            linear   PLN 06-AUG-2024
DEFINITION  growth-regulating factor 6 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944445
VERSION     XP_040944445.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088511.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="growth-regulating factor 6 isoform X4"
                     /calculated_mol_wt=51425
     Region          53..87
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     Region          124..165
                     /region_name="WRC"
                     /note="pfam08879"
                     /db_xref="CDD:462621"
     CDS             1..477
                     /gene="LOC107910325"
                     /coded_by="XM_041088511.1:1537..2970"
                     /db_xref="GeneID:107910325"
ORIGIN      
        1 mlsfsapkse alsmgrssqn vtfpyfhlts pactrntgyn tggfnganmn ggpftssqwm
       61 elehqaliyk ymaanvpips tllipirkal dsagfssfsg gllrpntsvg wgafhlgfsn
      121 ntdpepgrcr rtdgkkwrcs rdavadqkyc erhmnrgrhr srkpvegqsg rstasttttt
      181 tklmhsgsss sasvvgpngg ngesnsltia qqqfknlqpa gesnlshsgp lnrwllnkes
      241 igermhdtap gnefgvvsse sllnpshkss slvkcinfgc sqdldsqete shrsvrqffd
      301 awpktqsdcs siflpeadvq sdrtqlsism pmalsdfmss tsspnnedvt hsplqlwrel
      361 dpiqmglevg svgnetnwrq anwipisret svggplgevl hstnsssaec knssalnlmt
      421 ekcdhsprlg lsptgvlqkt mfgshsnssa gsspraennk ndllgstivh ssslpal
//
LOCUS       XP_016693627             727 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-7N [Gossypium hirsutum].
ACCESSION   XP_016693627
VERSION     XP_016693627.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838138.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693627.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..727
                     /product="kinesin-like protein KIN-7N"
                     /calculated_mol_wt=82395
     Region          3..333
                     /region_name="KISc_CENP_E"
                     /note="Kinesin motor domain, CENP-E/KIP2-like subgroup;
                     cd01374"
                     /db_xref="CDD:276825"
     Site            order(11,85,88,90..93,236)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276825"
     Site            order(286,289,292)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276825"
     Region          <530..688
                     /region_name="COG4026"
                     /note="Uncharacterized conserved protein, contains TOPRIM
                     domain, potential nuclease [General function prediction
                     only]"
                     /db_xref="CDD:443204"
     CDS             1..727
                     /gene="LOC107910322"
                     /coded_by="XM_016838138.2:80..2263"
                     /db_xref="GeneID:107910322"
ORIGIN      
        1 mekicvavrv rppichenss snfwgvddnq islhklhgsp isgvsytfdh vfdencsnsd
       61 iyelltkdii haavdgfngt afaygqtssg ktftmngssn dpgiihravn difqkinmis
      121 dreflirvsy meiyneeind lfavenqklq ihenlergif vaglreeivn naeqvmklle
      181 sgevnrhfge tnmnarssrs htifrvvies kgkdtgsfgd ysisdairvs vlnlvdlags
      241 eriaktgtgg vrlkegkyin kslmvlgnvi nklsdsakrr ahipyrdskl trilqpalgg
      301 naktsiictv apeeihieet kgtllfasra krvtncaqvn evltdaallk rqkleieelr
      361 wklqgshaev leqeilklrn dmlkyelere klemeleker rshkerdqyi rdqlmmienl
      421 sslvsdgdgs ssqgsmkesp teechnrgdd fktpcfkaap kafvakrsny sqlpdfsplp
      481 dsfsdvaded twfkinkgyi adldslqttp arkvqsfppe dvtpnylnkk yrkelqnlkr
      541 rlelvteekn elqrklaedi evkdrlkgdi sklkqealla rempqrlcgs vtsfkdtyee
      601 vlskmqrytf dgksstakll rciseigsil fstmetsisn ttdrhklsse ndsliqeynk
      661 mlseklksti tslilsetas sedkqtktpc scnfevvaws ryhvsilvlf fvmilgyfvp
      721 ffrtlif
//
LOCUS       XP_016693626             111 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693626
VERSION     XP_016693626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..111
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11811
     CDS             1..111
                     /gene="LOC107910321"
                     /coded_by="XM_016838137.2:153..488"
                     /db_xref="GeneID:107910321"
ORIGIN      
        1 maattsatss csgffnlrsn ndeprvvrss ssthsspagg cgkldgvamw fingvataff
       61 aslqrcscir iateeeddge eandvplihs dgnyvrheag tisrrrrkii s
//
LOCUS       XP_016693624             184 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SOB FIVE-LIKE 5 [Gossypium hirsutum].
ACCESSION   XP_016693624
VERSION     XP_016693624.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838135.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="protein SOB FIVE-LIKE 5"
                     /calculated_mol_wt=20186
     CDS             1..184
                     /gene="LOC107910319"
                     /coded_by="XM_016838135.2:273..827"
                     /db_xref="GeneID:107910319"
ORIGIN      
        1 mnlsasqcgs gcesgwtfyl gqssysqtrc qnfggnfdev ygvkgarfgv edeeeglsmv
       61 sdassgprhy ycqdyvecld enrsfcshpv npepanktsk nkkkmkehcs nnqqhsyldd
      121 tasspvtsfs ekninkdasm elldfsqgfs gthfkgksss fqkklgflkt gkagsknlqg
      181 rske
//
LOCUS       XP_016691020             226 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691020
VERSION     XP_016691020.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835531.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..226
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26107
     CDS             1..226
                     /gene="LOC107908344"
                     /coded_by="XM_016835531.2:193..873"
                     /db_xref="GeneID:107908344"
ORIGIN      
        1 mfrpficatf nphqdddgpr kprnnkarkt ddknpysdrg ldkfsallse leqkkqkiys
       61 qtgsqdvklv rfkyknstdf vpivvklkdn kkeeekkkgi dntttkemnl daqvidkhpi
      121 hegkevmnkv ppglqpvtdq kkkkqsfswn iefhkwrrpc yylptflvli llllvlfers
      181 vsilitcigw ymvpiiqgks ynkkkgyvrk lsdnktgavg dkssqv
//
LOCUS       XP_016693621             716 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR1 [Gossypium hirsutum].
ACCESSION   XP_016693621
VERSION     XP_016693621.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838132.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693621.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="protein NPGR1"
                     /calculated_mol_wt=79178
     Region          47..342
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <47..>88
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          479..712
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          606..634
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(607,610..611,614..615,617,641,644..645,648..649,
                     651..652,678,681..682,685..686,689)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          639..672
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          677..705
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..716
                     /gene="LOC107910318"
                     /coded_by="XM_016838132.2:491..2641"
                     /db_xref="GeneID:107910318"
ORIGIN      
        1 mlcacsgeqf kfedapqspe slatrdfsas glssrtgdwe sklddvqvde aestlkeals
       61 lnyeearall grleyqrgnf daalqvfqgi dikglkprmt gaivertrqr klrskgdiip
      121 psvlslhsvs llleaillka ksldelghfr daakecniil dvveaafpng mhegiaedck
      181 lqemfhkale llprlwkkag flgeaitayr rvlvkpwnld plrvaslqkd laanllyggv
      241 esslpphlqv wgsanpngnm eeaillllvl mqkvvygeik wdsdimdhli faltvtgqfe
      301 llgsyveqal pgiyeransw yllalcyaaa gqnevalnll kkvsgqseak hkphipallf
      361 gaklssqdpk hahygitfar nvidsaaddq vnehfksqah kflgvcygna arisisdaer
      421 svfqkeslas lncaafnmke dpdlifnlsl enavqrnldv afdnamvysn mvtedsgrgw
      481 rllalilsad rrfkdaetil evaldeagsl dqlellrlra vlqiaqerpk qaietyrill
      541 sliktqresr snnfesakss dsegvtervl elaawqdlat vytkfgswld aeicvnkaks
      601 ielhspkswh tsgllfeaqs lhkealvsfs ialsiepdyv psivstaavl lqlgsqsslp
      661 iarsflmnal rldptnhdaw mnlgliakle gslqqaadff qaayelkmsa pveafk
//
LOCUS       XP_040944446             716 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR1 [Gossypium hirsutum].
ACCESSION   XP_040944446
VERSION     XP_040944446.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088512.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="protein NPGR1"
                     /calculated_mol_wt=79178
     Region          47..342
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <47..>88
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          479..712
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          606..634
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(607,610..611,614..615,617,641,644..645,648..649,
                     651..652,678,681..682,685..686,689)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          639..672
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          677..705
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..716
                     /gene="LOC107910318"
                     /coded_by="XM_041088512.1:362..2512"
                     /db_xref="GeneID:107910318"
ORIGIN      
        1 mlcacsgeqf kfedapqspe slatrdfsas glssrtgdwe sklddvqvde aestlkeals
       61 lnyeearall grleyqrgnf daalqvfqgi dikglkprmt gaivertrqr klrskgdiip
      121 psvlslhsvs llleaillka ksldelghfr daakecniil dvveaafpng mhegiaedck
      181 lqemfhkale llprlwkkag flgeaitayr rvlvkpwnld plrvaslqkd laanllyggv
      241 esslpphlqv wgsanpngnm eeaillllvl mqkvvygeik wdsdimdhli faltvtgqfe
      301 llgsyveqal pgiyeransw yllalcyaaa gqnevalnll kkvsgqseak hkphipallf
      361 gaklssqdpk hahygitfar nvidsaaddq vnehfksqah kflgvcygna arisisdaer
      421 svfqkeslas lncaafnmke dpdlifnlsl enavqrnldv afdnamvysn mvtedsgrgw
      481 rllalilsad rrfkdaetil evaldeagsl dqlellrlra vlqiaqerpk qaietyrill
      541 sliktqresr snnfesakss dsegvtervl elaawqdlat vytkfgswld aeicvnkaks
      601 ielhspkswh tsgllfeaqs lhkealvsfs ialsiepdyv psivstaavl lqlgsqsslp
      661 iarsflmnal rldptnhdaw mnlgliakle gslqqaadff qaayelkmsa pveafk
//
LOCUS       XP_016693622             716 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR1 [Gossypium hirsutum].
ACCESSION   XP_016693622
VERSION     XP_016693622.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838133.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693622.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="protein NPGR1"
                     /calculated_mol_wt=79178
     Region          47..342
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <47..>88
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          479..712
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          606..634
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(607,610..611,614..615,617,641,644..645,648..649,
                     651..652,678,681..682,685..686,689)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          639..672
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          677..705
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..716
                     /gene="LOC107910318"
                     /coded_by="XM_016838133.2:236..2386"
                     /db_xref="GeneID:107910318"
ORIGIN      
        1 mlcacsgeqf kfedapqspe slatrdfsas glssrtgdwe sklddvqvde aestlkeals
       61 lnyeearall grleyqrgnf daalqvfqgi dikglkprmt gaivertrqr klrskgdiip
      121 psvlslhsvs llleaillka ksldelghfr daakecniil dvveaafpng mhegiaedck
      181 lqemfhkale llprlwkkag flgeaitayr rvlvkpwnld plrvaslqkd laanllyggv
      241 esslpphlqv wgsanpngnm eeaillllvl mqkvvygeik wdsdimdhli faltvtgqfe
      301 llgsyveqal pgiyeransw yllalcyaaa gqnevalnll kkvsgqseak hkphipallf
      361 gaklssqdpk hahygitfar nvidsaaddq vnehfksqah kflgvcygna arisisdaer
      421 svfqkeslas lncaafnmke dpdlifnlsl enavqrnldv afdnamvysn mvtedsgrgw
      481 rllalilsad rrfkdaetil evaldeagsl dqlellrlra vlqiaqerpk qaietyrill
      541 sliktqresr snnfesakss dsegvtervl elaawqdlat vytkfgswld aeicvnkaks
      601 ielhspkswh tsgllfeaqs lhkealvsfs ialsiepdyv psivstaavl lqlgsqsslp
      661 iarsflmnal rldptnhdaw mnlgliakle gslqqaadff qaayelkmsa pveafk
//
LOCUS       XP_040944447             716 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR1 [Gossypium hirsutum].
ACCESSION   XP_040944447
VERSION     XP_040944447.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088513.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="protein NPGR1"
                     /calculated_mol_wt=79178
     Region          47..342
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <47..>88
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          479..712
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          606..634
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(607,610..611,614..615,617,641,644..645,648..649,
                     651..652,678,681..682,685..686,689)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          639..672
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          677..705
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..716
                     /gene="LOC107910318"
                     /coded_by="XM_041088513.1:471..2621"
                     /db_xref="GeneID:107910318"
ORIGIN      
        1 mlcacsgeqf kfedapqspe slatrdfsas glssrtgdwe sklddvqvde aestlkeals
       61 lnyeearall grleyqrgnf daalqvfqgi dikglkprmt gaivertrqr klrskgdiip
      121 psvlslhsvs llleaillka ksldelghfr daakecniil dvveaafpng mhegiaedck
      181 lqemfhkale llprlwkkag flgeaitayr rvlvkpwnld plrvaslqkd laanllyggv
      241 esslpphlqv wgsanpngnm eeaillllvl mqkvvygeik wdsdimdhli faltvtgqfe
      301 llgsyveqal pgiyeransw yllalcyaaa gqnevalnll kkvsgqseak hkphipallf
      361 gaklssqdpk hahygitfar nvidsaaddq vnehfksqah kflgvcygna arisisdaer
      421 svfqkeslas lncaafnmke dpdlifnlsl enavqrnldv afdnamvysn mvtedsgrgw
      481 rllalilsad rrfkdaetil evaldeagsl dqlellrlra vlqiaqerpk qaietyrill
      541 sliktqresr snnfesakss dsegvtervl elaawqdlat vytkfgswld aeicvnkaks
      601 ielhspkswh tsgllfeaqs lhkealvsfs ialsiepdyv psivstaavl lqlgsqsslp
      661 iarsflmnal rldptnhdaw mnlgliakle gslqqaadff qaayelkmsa pveafk
//
LOCUS       XP_016693623             716 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NPGR1 [Gossypium hirsutum].
ACCESSION   XP_016693623
VERSION     XP_016693623.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838134.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693623.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="protein NPGR1"
                     /calculated_mol_wt=79178
     Region          47..342
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <47..>88
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          479..712
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          606..634
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(607,610..611,614..615,617,641,644..645,648..649,
                     651..652,678,681..682,685..686,689)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          639..672
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          677..705
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..716
                     /gene="LOC107910318"
                     /coded_by="XM_016838134.2:341..2491"
                     /db_xref="GeneID:107910318"
ORIGIN      
        1 mlcacsgeqf kfedapqspe slatrdfsas glssrtgdwe sklddvqvde aestlkeals
       61 lnyeearall grleyqrgnf daalqvfqgi dikglkprmt gaivertrqr klrskgdiip
      121 psvlslhsvs llleaillka ksldelghfr daakecniil dvveaafpng mhegiaedck
      181 lqemfhkale llprlwkkag flgeaitayr rvlvkpwnld plrvaslqkd laanllyggv
      241 esslpphlqv wgsanpngnm eeaillllvl mqkvvygeik wdsdimdhli faltvtgqfe
      301 llgsyveqal pgiyeransw yllalcyaaa gqnevalnll kkvsgqseak hkphipallf
      361 gaklssqdpk hahygitfar nvidsaaddq vnehfksqah kflgvcygna arisisdaer
      421 svfqkeslas lncaafnmke dpdlifnlsl enavqrnldv afdnamvysn mvtedsgrgw
      481 rllalilsad rrfkdaetil evaldeagsl dqlellrlra vlqiaqerpk qaietyrill
      541 sliktqresr snnfesakss dsegvtervl elaawqdlat vytkfgswld aeicvnkaks
      601 ielhspkswh tsgllfeaqs lhkealvsfs ialsiepdyv psivstaavl lqlgsqsslp
      661 iarsflmnal rldptnhdaw mnlgliakle gslqqaadff qaayelkmsa pveafk
//
LOCUS       XP_016693619             172 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693619
VERSION     XP_016693619.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693619.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..172
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18909
     CDS             1..172
                     /gene="LOC107910317"
                     /coded_by="XM_016838130.2:345..863"
                     /db_xref="GeneID:107910317"
ORIGIN      
        1 mqqlhcappr avlsadaikn yetvvyfvar lglgeacssa yicesdkavp sesgstlpek
       61 vkkrkqsilk ateqfviaae qfvitakkle ndlqsldkrs sildlrlecq dlekislinr
      121 fakfygrgqa draetsstsa aiasppkffi qryvsavpmp rnvpdkvqcl pl
//
LOCUS       XP_016693618             445 aa            linear   PLN 06-AUG-2024
DEFINITION  interferon-related developmental regulator 1 [Gossypium hirsutum].
ACCESSION   XP_016693618
VERSION     XP_016693618.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838129.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693618.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..445
                     /product="interferon-related developmental regulator 1"
                     /calculated_mol_wt=48998
     Region          40..332
                     /region_name="IFRD"
                     /note="Interferon-related developmental regulator (IFRD);
                     pfam05004"
                     /db_xref="CDD:461515"
     Region          377..428
                     /region_name="IFRD_C"
                     /note="Interferon-related protein conserved region;
                     pfam04836"
                     /db_xref="CDD:461452"
     CDS             1..445
                     /gene="LOC107910316"
                     /coded_by="XM_016838129.2:238..1575"
                     /db_xref="GeneID:107910316"
ORIGIN      
        1 mgkrktqrnn aamldsdddn ssvsssstmr sagmsvsgte evelnkdsll deavdnlyek
       61 rgstrekala siieafnsnl qhefvekkfa tllhrclnsi kkgsskeisl ashtigllal
      121 tigpgdkare ileesitpvs qafksgyess kiasllecla iitfvggiep eeteksmqim
      181 wqlvhpklgs nvitvkpsav vitavgsaws fllttmdrws lspklwlesi tylsslldkd
      241 drsvriaage alevifemgs lekfateaeg snngsvsegn kskegllhiq glrakilnqv
      301 rdlsveaggk gsakkdlnyq rslfkdvlef ledgycpets mkiggeslqt stwsqliqln
      361 ffrrflgggf tkhmqenefl qdvfgftpkr nlvggehvsn nlkrmykspn svinkartqh
      421 lnkqrmlser knighfavnv gdeds
//
LOCUS       XP_040944448             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944448
VERSION     XP_040944448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088514.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=15600
     Region          <58..89
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..136
                     /gene="LOC107944899"
                     /coded_by="XM_041088514.1:228..638"
                     /db_xref="GeneID:107944899"
ORIGIN      
        1 mlgqslwktr pahwsfskfs piarkenkil hsrieamhiq faekdrgsal aelvtvsgig
       61 nnwcegfsty prtydlihan gvfslyqdky fsypyfssvp cfirnqschs aynsihtstv
      121 amlhhlsllk lrnnkw
//
LOCUS       XP_040944449             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944449
VERSION     XP_040944449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088515.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..130
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=14933
     Region          <58..89
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..130
                     /gene="LOC107944899"
                     /coded_by="XM_041088515.1:239..631"
                     /db_xref="GeneID:107944899"
ORIGIN      
        1 mlgqslwktr pahwsfskfs piarkenkil hsrieamhiq faekdrgsal aelvtvsgig
       61 nnwcegfsty prtydlihan gvfslyqdki gsnglensig kkvcvmhtrf enlfcfrtwi
      121 qltlqqkwri
//
LOCUS       XP_040944450             110 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944450
VERSION     XP_040944450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088516.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..110
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=12564
     Region          <38..69
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..110
                     /gene="LOC107944899"
                     /coded_by="XM_041088516.1:356..688"
                     /db_xref="GeneID:107944899"
ORIGIN      
        1 msrkslnkil hsrieamhiq faekdrgsal aelvtvsgig nnwcegfsty prtydlihan
       61 gvfslyqdki gsnglensig kkvcvmhtrf enlfcfrtwi qltlqqkwri
//
LOCUS       XP_016693616             114 aa            linear   PLN 06-AUG-2024
DEFINITION  QWRF motif-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016693616
VERSION     XP_016693616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..114
                     /product="QWRF motif-containing protein 2"
                     /calculated_mol_wt=12909
     Region          <18..114
                     /region_name="QWRF"
                     /note="QWRF family; pfam04484"
                     /db_xref="CDD:461327"
     CDS             1..114
                     /gene="LOC107910314"
                     /coded_by="XM_016838127.2:1072..1416"
                     /db_xref="GeneID:107910314"
ORIGIN      
        1 msprlrngld dnlvtrlsil sfvgndfkig enkvldanll rllhnwwlqw rfvnarvdat
       61 lssqrsnaem ifldewtild hdyysslsgs tkalmasmvr lpvvygakvd vpkl
//
LOCUS       XP_040944451             766 aa            linear   PLN 06-AUG-2024
DEFINITION  subtilisin-like protease SBT1.7 [Gossypium hirsutum].
ACCESSION   XP_040944451
VERSION     XP_040944451.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088517.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..766
                     /product="subtilisin-like protease SBT1.7"
                     /calculated_mol_wt=81133
     Region          40..115
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          112..584
                     /region_name="Peptidases_S8_3"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 3; cd04852"
                     /db_xref="CDD:173795"
     Site            order(147,220,271,290,322,550)
                     /site_type="active"
                     /db_xref="CDD:173795"
     Site            order(147,220,550)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173795"
     Region          352..479
                     /region_name="PA_subtilisin_like"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     cd02120"
                     /db_xref="CDD:239035"
     Site            443..445
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239035"
     Region          665..762
                     /region_name="fn3_6"
                     /note="Fibronectin type-III domain; pfam17766"
                     /db_xref="CDD:465493"
     CDS             1..766
                     /gene="LOC107910312"
                     /coded_by="XM_041088517.1:187..2487"
                     /db_xref="GeneID:107910312"
ORIGIN      
        1 mqsvnystke mkplkikvaa ivvvlslcya cviaeqakrt yivhmdksnm pecfthhslw
       61 ydsslksvsk sasmlyryen vihgysarlt peeaeslgkq sgvlsvlpdv ryelhttrtp
      121 eflglgnnsa lipttastse vivgildtgv wpelksfdds elgpvpsgwk gkcevgqnfs
      181 ssscnkklig aryylqgyea algpidetme sksprdddgh gthtattaag svvpnanllg
      241 yasgtargma sharvaiykv cwlngcfisd itagmdraia dgvdimsmsi gghiteyyld
      301 iiaigaftaa ahgifvscsa gnegpeagsl lnvapwittv gagtldrdfp asitlgnnmr
      361 ytgvtlyngk qlsnstvplv yggsvsnssn gslcidgsli pekvrgkivv cdrggsdrve
      421 kgvvvkaagg vgmilantlt fgeelladah llpsaavgqi agdsikkyis fdpnptatig
      481 pgttmlgvqp spmvaafssr gpnpvtpaif kpdiiapgvn ilagwtgevg ptglaidqrh
      541 vkfnivsgts mscphvsgla ailkaahpew spaaiksalm ttaystypng ekikdvatgg
      601 patpfdygag hvdpiaaldp glvydttidd ylgflcalny tpsqiksttq tnftcqkskk
      661 ytlgdfnyps fsvpfqtglr stvkytrtit nvgvpatyki slysqtqavk msvvpailsf
      721 saqyekksyt vtfraismpp gstgfarlew sdgkhivssp iayiwt
//
LOCUS       XP_016693613             394 aa            linear   PLN 06-AUG-2024
DEFINITION  3-oxo-Delta(4,5)-steroid 5-beta-reductase [Gossypium hirsutum].
ACCESSION   XP_016693613
VERSION     XP_016693613.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838124.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693613.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..394
                     /product="3-oxo-Delta(4,5)-steroid 5-beta-reductase"
                     /calculated_mol_wt=44819
     Region          28..347
                     /region_name="5beta-POR_like_SDR_a"
                     /note="progesterone 5-beta-reductase-like proteins
                     (5beta-POR), atypical (a) SDRs; cd08948"
                     /db_xref="CDD:187652"
     Site            order(33..38,62..64,80..82,104..106,143..144,181,205..206,
                     208,215..217,345)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187652"
     Site            order(147,181)
                     /site_type="active"
                     /db_xref="CDD:187652"
     CDS             1..394
                     /gene="LOC107910310"
                     /coded_by="XM_016838124.2:109..1293"
                     /db_xref="GeneID:107910310"
ORIGIN      
        1 mswwwagaig aakkklgede tpksfqsval vvgvtgivgn slaeilplsd tpggpwkvyg
       61 varrprphwh aehrieyiqc dvsdpndtes klsqltdvth ifyvswvnrt tetdnceing
      121 smfrnvlhtl ilnapnlrhi clqtgakhyv gsfeyitsgk iephdppfte dlprlntpnf
      181 yyvqedillq eiekkqgltw svhrpntifg fspyslmniv gtlcvyaaic kyegkpllfp
      241 gnkvtwecys evsdadliae hqiwaavdpy akneafnvnn gdifkwkhlw kvlaeqfgie
      301 kygleegknv glkemmkgke svwekivnek glqktrleev gfwwfvdill smmpmespil
      361 cmnkskehgf lgfrnskssl itwidkmkaf kivp
//
LOCUS       XP_016693612             340 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693612
VERSION     XP_016693612.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838123.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=38162
     Region          11..98
                     /region_name="Syntaxin-6_N"
                     /note="Syntaxin 6, N-terminal; pfam09177"
                     /db_xref="CDD:462706"
     CDS             1..340
                     /gene="LOC107910309"
                     /coded_by="XM_016838123.2:287..1309"
                     /db_xref="GeneID:107910309"
ORIGIN      
        1 mastldrwek dpffavaeev qqsadrmett yrtwihaikd gsstwnleel grdlhtalst
       61 tkwqleefek avqssyygns seeardrhre fivaiknqnl kiekylqesa ssegktpvpw
      121 vhldegecne lalflsappl prdkklppkv hgrasdlrrg inresapdfl knasqsiefs
      181 ssevnneksy ghrrtasasp digawkiaiv ddvlqqnssn gqrfipprrv pssgalsste
      241 savkgqwskn girksatarh qesdaefsrp pelargndec cekgsgcvdc ndkqpigwyg
      301 aikrrlqrsk hqlknsrptq iaiwaflvic livlivlqti
//
LOCUS       XP_040944452             277 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944452
VERSION     XP_040944452.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088518.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..277
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=30824
     Region          <2..35
                     /region_name="Syntaxin-6_N"
                     /note="Syntaxin 6, N-terminal; pfam09177"
                     /db_xref="CDD:462706"
     CDS             1..277
                     /gene="LOC107910309"
                     /coded_by="XM_041088518.1:109..942"
                     /db_xref="GeneID:107910309"
ORIGIN      
        1 mleefekavq ssyygnssee ardrhrefiv aiknqnlkie kylqesasse gktpvpwvhl
       61 degecnelal flsapplprd kklppkvhgr asdlrrginr esapdflkna sqsiefssse
      121 vnneksyghr rtasaspdig awkiaivddv lqqnssngqr fipprrvpss galsstesav
      181 kgqwskngir ksatarhqes daefsrppel argndeccek gsgcvdcndk qpigwygaik
      241 rrlqrskhql knsrptqiai waflvicliv livlqti
//
LOCUS       XP_016693614             140 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b5 [Gossypium hirsutum].
ACCESSION   XP_016693614
VERSION     XP_016693614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..140
                     /product="cytochrome b5"
                     /calculated_mol_wt=15414
     Region          8..79
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     CDS             1..140
                     /gene="LOC107910311"
                     /coded_by="XM_016838125.2:309..731"
                     /db_xref="GeneID:107910311"
ORIGIN      
        1 maghtvytls evsryksknd cwlvidgrvl nvtkfleehp ggeevllesa gkdatkefnd
       61 ighsksaqnl llkyqigvlq ghtlknneqv gsteepkkke msafvikddl tpkyaavvef
      121 aapllvagsy fcyryltpss
//
LOCUS       XP_016693611             511 aa            linear   PLN 06-AUG-2024
DEFINITION  pumilio homolog 12 [Gossypium hirsutum].
ACCESSION   XP_016693611
VERSION     XP_016693611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838122.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="pumilio homolog 12"
                     /calculated_mol_wt=57876
     Region          184..501
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(239..240,243,278..279,282,316,319,351..352,355,
                     384..385,387..388,391,420..421,423..424,427,458..459,
                     461..462,465,495,498)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..511
                     /gene="LOC107910308"
                     /coded_by="XM_016838122.2:304..1839"
                     /db_xref="GeneID:107910308"
ORIGIN      
        1 mesgnrsvwe tplvppsrsl gsyvphhslt spqnlldnnp fdqslesaff glnlstqknp
       61 eldygfsrge kerkneglhv gfdgvmrvgp ysdswnslvp rsyqlpnlne ngylfdsrre
      121 hvfneisilp fsyqnrlapp ltaagagcsr nknvmrssfn shnndqisng frrsrwshep
      181 lnclsmgdlr grflslakdq hgcwflerai deasreeidm ilmevighvd elmldpfany
      241 vvqklvvmcn eeqksqiilm ivkdgfrlvn iclnvrgtra vqkllenlts qqqislimsa
      301 lttcvvaltk dinghrviqc clkifsdqdn kyllkevadn cyqiatdksg ccamqhcidh
      361 skgeakanlv reiianalhl aqdrygnyvv qhvlglkerq ttesllrqle gnyaslscnr
      421 ygsnvvekcl sesgeeqstr iikellrspi gsrllvdrfg nyviqsalsv skgfvynall
      481 nlvwvnfpmm rnhvygrwil awfnkrkppc n
//
LOCUS       XP_040944454             511 aa            linear   PLN 06-AUG-2024
DEFINITION  pumilio homolog 12 [Gossypium hirsutum].
ACCESSION   XP_040944454
VERSION     XP_040944454.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088520.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="pumilio homolog 12"
                     /calculated_mol_wt=57876
     Region          184..501
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(239..240,243,278..279,282,316,319,351..352,355,
                     384..385,387..388,391,420..421,423..424,427,458..459,
                     461..462,465,495,498)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..511
                     /gene="LOC107910308"
                     /coded_by="XM_041088520.1:305..1840"
                     /db_xref="GeneID:107910308"
ORIGIN      
        1 mesgnrsvwe tplvppsrsl gsyvphhslt spqnlldnnp fdqslesaff glnlstqknp
       61 eldygfsrge kerkneglhv gfdgvmrvgp ysdswnslvp rsyqlpnlne ngylfdsrre
      121 hvfneisilp fsyqnrlapp ltaagagcsr nknvmrssfn shnndqisng frrsrwshep
      181 lnclsmgdlr grflslakdq hgcwflerai deasreeidm ilmevighvd elmldpfany
      241 vvqklvvmcn eeqksqiilm ivkdgfrlvn iclnvrgtra vqkllenlts qqqislimsa
      301 lttcvvaltk dinghrviqc clkifsdqdn kyllkevadn cyqiatdksg ccamqhcidh
      361 skgeakanlv reiianalhl aqdrygnyvv qhvlglkerq ttesllrqle gnyaslscnr
      421 ygsnvvekcl sesgeeqstr iikellrspi gsrllvdrfg nyviqsalsv skgfvynall
      481 nlvwvnfpmm rnhvygrwil awfnkrkppc n
//
LOCUS       XP_016693605             508 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 81Q32 [Gossypium hirsutum].
ACCESSION   XP_016693605
VERSION     XP_016693605.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838116.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693605.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..508
                     /product="cytochrome P450 81Q32"
                     /calculated_mol_wt=57848
     Region          61..491
                     /region_name="CYP81"
                     /note="cytochrome P450 family 81; cd20653"
                     /db_xref="CDD:410746"
     Site            order(96,121,125,133,184,304,307..308,311..312,371,
                     375..376,378,436..439,442..446,449..450)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410746"
     Site            order(214,218,242,303,306..307,376)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410746"
     CDS             1..508
                     /gene="LOC107910306"
                     /coded_by="XM_016838116.2:559..2085"
                     /db_xref="GeneID:107910306"
ORIGIN      
        1 mevwifnyvl fflifyfltq rllqnrglpp spalslpiig hlhlikkplh rtlaklstqh
       61 gpilflrfgs rpvlvvssps ateeclsknd tvfanrprll agkhlgydyt tlvwapygdh
      121 wrnlrrvasl qllssnrvqk ylgirmdevk slvvrlfrst skgsgefqvv emksmffelt
      181 lnvmmrmiag krycrngede leeekkfkei vresfqvsga tnivdfvpil kwvglnkiek
      241 kleilqrkrd efmqnlider rkltssnscy eqnsktivdv llsaqetdpd yytddtirgf
      301 mqvllsagtd tsaatmewgl slllnnpktl ekareeidme vgqsrlihes dyerlaylha
      361 visetfrmcp pgpllvphes seecmvrgfs iprgtmllvn iwamhndpvl wenptefkpd
      421 rflgpglvkn gftflpfgtg rrgcpgesla mglipltvgc liqcfewgrm geemvdmseg
      481 nglnmpkaqp lvarcrprpa mmnllsql
//
LOCUS       XP_040944455             434 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase APD2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944455
VERSION     XP_040944455.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088521.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..434
                     /product="E3 ubiquitin-protein ligase APD2 isoform X1"
                     /calculated_mol_wt=49409
     Region          92..160
                     /region_name="DUF4792"
                     /note="Domain of unknown function (DUF4792); pfam16040"
                     /db_xref="CDD:464988"
     Region          188..275
                     /region_name="DUF4793"
                     /note="Domain of unknown function (DUF4793); pfam16041"
                     /db_xref="CDD:464989"
     Region          356..428
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..434
                     /gene="LOC107910307"
                     /coded_by="XM_041088521.1:49..1353"
                     /db_xref="GeneID:107910307"
ORIGIN      
        1 mfkqtcrsip rqsqrkrpgf vrasnhaqlp qwkdtwtrvl paltlwicvs vilrygyygn
       61 csmvlgpsss rlmkassvfv qqvqvrdenw kgalvyvfse kpelsnevnw nfsnylivga
      121 yarkgyslwl nkgsrisirw atqpsrldki eliiikgekk retllpeqtv pfgalflnep
      181 vtgkeadyni eeddkysvgl insnprsiii tfslnvtskv ydvtkasdmc stlngscrlq
      241 lqfphtqyvi vstpdngdia gryvelsfva rvvtyiailg ffiiiillvl kylgacnder
      301 tvinsnttfr eiswrtetdp ilpeksvrlt ygttaeddnd daetgsssss sedlydaklc
      361 vicyddqrnc ffvpcghcat cydcaqrykq eekkrnplsl lsltnkncri meednkvcpi
      421 crrlihkvrr lfsp
//
LOCUS       XP_040944456             420 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase APD2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944456
VERSION     XP_040944456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088522.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..420
                     /product="E3 ubiquitin-protein ligase APD2 isoform X2"
                     /calculated_mol_wt=47711
     Region          78..146
                     /region_name="DUF4792"
                     /note="Domain of unknown function (DUF4792); pfam16040"
                     /db_xref="CDD:464988"
     Region          174..261
                     /region_name="DUF4793"
                     /note="Domain of unknown function (DUF4793); pfam16041"
                     /db_xref="CDD:464989"
     Region          342..414
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..420
                     /gene="LOC107910307"
                     /coded_by="XM_041088522.1:192..1454"
                     /db_xref="GeneID:107910307"
ORIGIN      
        1 mfrpgfvras nhaqlpqwkd twtrvlpalt lwicvsvilr ygyygncsmv lgpsssrlmk
       61 assvfvqqvq vrdenwkgal vyvfsekpel snevnwnfsn ylivgayark gyslwlnkgs
      121 risirwatqp srldkielii ikgekkretl lpeqtvpfga lflnepvtgk eadynieedd
      181 kysvglinsn prsiiitfsl nvtskvydvt kasdmcstln gscrlqlqfp htqyvivstp
      241 dngdiagryv elsfvarvvt yiailgffii iillvlkylg acndertvin snttfreisw
      301 rtetdpilpe ksvrltygtt aeddnddaet gssssssedl ydaklcvicy ddqrncffvp
      361 cghcatcydc aqrykqeekk rnplsllslt nkncrimeed nkvcpicrrl ihkvrrlfsp
//
LOCUS       XP_040944457             412 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase APD2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944457
VERSION     XP_040944457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088523.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..412
                     /product="E3 ubiquitin-protein ligase APD2 isoform X3"
                     /calculated_mol_wt=46764
     Region          92..160
                     /region_name="DUF4792"
                     /note="Domain of unknown function (DUF4792); pfam16040"
                     /db_xref="CDD:464988"
     Region          188..275
                     /region_name="DUF4793"
                     /note="Domain of unknown function (DUF4793); pfam16041"
                     /db_xref="CDD:464989"
     Region          356..406
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..412
                     /gene="LOC107910307"
                     /coded_by="XM_041088523.1:40..1278"
                     /db_xref="GeneID:107910307"
ORIGIN      
        1 mfkqtcrsip rqsqrkrpgf vrasnhaqlp qwkdtwtrvl paltlwicvs vilrygyygn
       61 csmvlgpsss rlmkassvfv qqvqvrdenw kgalvyvfse kpelsnevnw nfsnylivga
      121 yarkgyslwl nkgsrisirw atqpsrldki eliiikgekk retllpeqtv pfgalflnep
      181 vtgkeadyni eeddkysvgl insnprsiii tfslnvtskv ydvtkasdmc stlngscrlq
      241 lqfphtqyvi vstpdngdia gryvelsfva rvvtyiailg ffiiiillvl kylgacnder
      301 tvinsnttfr eiswrtetdp ilpeksvrlt ygttaeddnd daetgsssss sedlydaklc
      361 vicyddqrnc ffvpcghcat cydcaqrime ednkvcpicr rlihkvrrlf sp
//
LOCUS       XP_040944458             386 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase APD1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944458
VERSION     XP_040944458.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088524.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..386
                     /product="E3 ubiquitin-protein ligase APD1 isoform X4"
                     /calculated_mol_wt=43943
     Region          92..160
                     /region_name="DUF4792"
                     /note="Domain of unknown function (DUF4792); pfam16040"
                     /db_xref="CDD:464988"
     Region          188..>264
                     /region_name="DUF4793"
                     /note="Domain of unknown function (DUF4793); pfam16041"
                     /db_xref="CDD:464989"
     Region          308..380
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..386
                     /gene="LOC107910307"
                     /coded_by="XM_041088524.1:56..1216"
                     /db_xref="GeneID:107910307"
ORIGIN      
        1 mfkqtcrsip rqsqrkrpgf vrasnhaqlp qwkdtwtrvl paltlwicvs vilrygyygn
       61 csmvlgpsss rlmkassvfv qqvqvrdenw kgalvyvfse kpelsnevnw nfsnylivga
      121 yarkgyslwl nkgsrisirw atqpsrldki eliiikgekk retllpeqtv pfgalflnep
      181 vtgkeadyni eeddkysvgl insnprsiii tfslnvtskv ydvtkasdmc stlngscrlq
      241 lqfphtqyvi vstpdngdia greiswrtet dpilpeksvr ltygttaedd nddaetgsss
      301 sssedlydak lcvicyddqr ncffvpcghc atcydcaqry kqeekkrnpl sllsltnknc
      361 rimeednkvc picrrlihkv rrlfsp
//
LOCUS       XP_040944459             372 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase APD2 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040944459
VERSION     XP_040944459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088525.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..372
                     /product="E3 ubiquitin-protein ligase APD2 isoform X5"
                     /calculated_mol_wt=42112
     Region          30..98
                     /region_name="DUF4792"
                     /note="Domain of unknown function (DUF4792); pfam16040"
                     /db_xref="CDD:464988"
     Region          126..213
                     /region_name="DUF4793"
                     /note="Domain of unknown function (DUF4793); pfam16041"
                     /db_xref="CDD:464989"
     Region          294..366
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..372
                     /gene="LOC107910307"
                     /coded_by="XM_041088525.1:170..1288"
                     /db_xref="GeneID:107910307"
ORIGIN      
        1 mvlgpsssrl mkassvfvqq vqvrdenwkg alvyvfsekp elsnevnwnf snylivgaya
       61 rkgyslwlnk gsrisirwat qpsrldkiel iiikgekkre tllpeqtvpf galflnepvt
      121 gkeadyniee ddkysvglin snprsiiitf slnvtskvyd vtkasdmcst lngscrlqlq
      181 fphtqyvivs tpdngdiagr yvelsfvarv vtyiailgff iiiillvlky lgacndertv
      241 insnttfrei swrtetdpil peksvrltyg ttaeddndda etgsssssse dlydaklcvi
      301 cyddqrncff vpcghcatcy dcaqrykqee kkrnplslls ltnkncrime ednkvcpicr
      361 rlihkvrrlf sp
//
LOCUS       XP_040944460             312 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944460
VERSION     XP_040944460.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088526.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..312
                     /product="agamous-like MADS-box protein AGL104 isoform X1"
                     /calculated_mol_wt=35160
     Region          2..75
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            60
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          112..>170
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..312
                     /gene="LOC107910304"
                     /coded_by="XM_041088526.1:364..1302"
                     /db_xref="GeneID:107910304"
ORIGIN      
        1 mgrvklqikr ienttnrqvt fskrrnglik kayelsvlcd vdvalimfsp sgrlslfsrn
       61 ksieeilery vnlpehergr lrneefllka lgklrdeadq iqtyqaassp estdsqleel
      121 qqeivkcksr iadiqrrlri fegeeittls qaefhkqile etlqqvrlrk qglqekatss
      181 ssaldwirkk dpqvhilnfl esngllpqrd ecqsvaenil ppldgeeiin vgdqlsptrs
      241 gldnsnnmqr telgqvnnvn lspwtelyst vagndsfpdg qpaaggggra llelyvsqft
      301 qsaistmnqh ht
//
LOCUS       XP_016693603             312 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693603
VERSION     XP_016693603.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838114.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..312
                     /product="agamous-like MADS-box protein AGL104 isoform X1"
                     /calculated_mol_wt=35160
     Region          2..75
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            60
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          112..>170
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..312
                     /gene="LOC107910304"
                     /coded_by="XM_016838114.2:261..1199"
                     /db_xref="GeneID:107910304"
ORIGIN      
        1 mgrvklqikr ienttnrqvt fskrrnglik kayelsvlcd vdvalimfsp sgrlslfsrn
       61 ksieeilery vnlpehergr lrneefllka lgklrdeadq iqtyqaassp estdsqleel
      121 qqeivkcksr iadiqrrlri fegeeittls qaefhkqile etlqqvrlrk qglqekatss
      181 ssaldwirkk dpqvhilnfl esngllpqrd ecqsvaenil ppldgeeiin vgdqlsptrs
      241 gldnsnnmqr telgqvnnvn lspwtelyst vagndsfpdg qpaaggggra llelyvsqft
      301 qsaistmnqh ht
//
LOCUS       XP_016693604             311 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693604
VERSION     XP_016693604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838115.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..311
                     /product="agamous-like MADS-box protein AGL104 isoform X2"
                     /calculated_mol_wt=35073
     Region          2..75
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,63,66..67,
                     70,73..74)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            60
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          111..>169
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..311
                     /gene="LOC107910304"
                     /coded_by="XM_016838115.2:355..1290"
                     /db_xref="GeneID:107910304"
ORIGIN      
        1 mgrvklqikr ienttnrqvt fskrrnglik kayelsvlcd vdvalimfsp sgrlslfsrn
       61 ksieeilery vnlpehergr lrneefllka lgklrdeadq iqtyqaaspe stdsqleelq
      121 qeivkcksri adiqrrlrif egeeittlsq aefhkqilee tlqqvrlrkq glqekatsss
      181 saldwirkkd pqvhilnfle sngllpqrde cqsvaenilp pldgeeiinv gdqlsptrsg
      241 ldnsnnmqrt elgqvnnvnl spwtelystv agndsfpdgq paaggggral lelyvsqftq
      301 saistmnqhh t
//
LOCUS       XP_040944461             266 aa            linear   PLN 06-AUG-2024
DEFINITION  agamous-like MADS-box protein AGL104 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944461
VERSION     XP_040944461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088527.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="agamous-like MADS-box protein AGL104 isoform X3"
                     /calculated_mol_wt=29858
     Region          66..>124
                     /region_name="K-box"
                     /note="K-box region; pfam01486"
                     /db_xref="CDD:460228"
     CDS             1..266
                     /gene="LOC107910304"
                     /coded_by="XM_041088527.1:409..1209"
                     /db_xref="GeneID:107910304"
ORIGIN      
        1 mfspsgrlsl fsrnksieei leryvnlpeh ergrlrneef llkalgklrd eadqiqtyqa
       61 asspestdsq leelqqeivk cksriadiqr rlrifegeei ttlsqaefhk qileetlqqv
      121 rlrkqglqek atssssaldw irkkdpqvhi lnflesngll pqrdecqsva enilppldge
      181 eiinvgdqls ptrsgldnsn nmqrtelgqv nnvnlspwte lystvagnds fpdgqpaagg
      241 ggrallelyv sqftqsaist mnqhht
//
LOCUS       XP_016693602             511 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 81C13 [Gossypium hirsutum].
ACCESSION   XP_016693602
VERSION     XP_016693602.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..511
                     /product="cytochrome P450 81C13"
                     /calculated_mol_wt=58643
     Region          67..494
                     /region_name="CYP81"
                     /note="cytochrome P450 family 81; cd20653"
                     /db_xref="CDD:410746"
     Site            order(102,127,131,139,188,301,304..305,308..309,368,
                     372..373,375,438..441,444..448,451..452)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410746"
     Site            order(217,221,245,300,303..304,373)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410746"
     CDS             1..511
                     /gene="LOC107910303"
                     /coded_by="XM_016838113.2:141..1676"
                     /db_xref="GeneID:107910303"
ORIGIN      
        1 mvflfvsmen lyhylviilf illtikllih ktknlppspf slpiighlhl iknplyqsla
       61 tllskygpvl ylkfgcrhvl vlsspsavee cltkndiifa nrprtmagdl mtynyttfvw
      121 apygslwrnh rrlsaveifc snsvekfssi reeevadfvr rlfevssgng tqkvdlkylf
      181 clltanvmwr tvagkrgved pkdveaekmf ftefkslffp slgtnicdff pvlrwigflg
      241 iekklkeihr rrdeylqnlv dgirlniskk nfslierlls lqqddpdfcp dqviktmvlm
      301 mfiagtesta itmewtmall lshpealqka rdeiirhvgh erllnesdlp klpylrcvvn
      361 etlrlypatp lllphcpsed cvvdgyeipk gtillvhawa iqrdpsiwee ptkfkperfy
      421 egtledkegf kylpkylpfg lgrracpgrn mglrsvllai gvfiqcfewe nvgsdkvdmt
      481 pdtiglsifk arplealcrp rpdvikllsq l
//
LOCUS       XP_016693601             800 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor protein kinase ZmPK1 [Gossypium hirsutum].
ACCESSION   XP_016693601
VERSION     XP_016693601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..800
                     /product="putative receptor protein kinase ZmPK1"
                     /calculated_mol_wt=88969
     Site            order(39,65,81..82,116,118,126,129,131..153)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,100,102,104,106,108,131,133,135,137,
                     139)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          79..159
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          <236..320
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          332..420
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(353,355,371)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          522..796
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(522..526,530,542,544,572,588..591,595,597,636,638,
                     640..641,643,654,657,676..679)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(522..526,530,542,544,572,588..591,595,636,638,
                     640..641,643,654)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(526,595,597,636,638,640,657,676..679)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(653..660,672..679)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..800
                     /gene="LOC107910302"
                     /coded_by="XM_016838112.2:114..2516"
                     /db_xref="GeneID:107910302"
ORIGIN      
        1 matplmllvl llafscppss sssdalcags slsvekkgdv lvspsgtfsa gfhpvgnnay
       61 sfsiwfnkps cnatasncti vwmanrdqlv ngrgsklsls tsgnlvlkda gqilvwetrt
      121 askslpklkl ddggnlilss leghilwqsy dsptdtllpl qpfnesskli ssrsqgsyss
      181 gyfqlyfdtd nvlclvykgp efssvywpsp wllrweagrs tfnnskiavl dtlgkftstd
      241 nftflsadyg skvsrllkvd fdgnirlysl kengetwvvs wqafpqpcmv hgccgpnsic
      301 iyspnfgrkc dcipgykmkn nsdwslgcep kfllpcnrpd qvgflklrhv efygydldmf
      361 pnvtledckn kcsklcdckg fqfrfikvhe pagtycypkt qllnghrppn fiadfylkvp
      421 katlslynna tvqhsklqcs nkvqtlerty skkpeneplk falwavcsvg glefvvflvw
      481 cflirnnddt spmagkllaa tgfrkftyae lkkatnsfsq eigrggggiv fkatlsdgrv
      541 aaiktltdan qgeaeflaev ntigklnhmn liemwglcte gkhrllvyey mehgslaknl
      601 slkaldwkkr fdiavgtarg laylheecle wvlhcdikph nilidskfqp kvsdfglswl
      661 lnrgdvkrsn isrirgtrgy mapewvsnlp itskvdvysy givllelvtg rspamgtavt
      721 ddgspkektt laawgrenma sagetetwkh eiidpklegi ydeaevlnli tvalqcvqed
      781 kdarptmsev vemllrnenh
//
LOCUS       XP_040944462             148 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944462
VERSION     XP_040944462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088528.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..148
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16697
     CDS             1..148
                     /gene="LOC121214646"
                     /coded_by="XM_041088528.1:153..599"
                     /db_xref="GeneID:121214646"
ORIGIN      
        1 mfygtksdvl tspggtfnas frlvgdnays faiwfskpsy natannctva wmanwdqlvn
       61 grcsklcilr feleqnlrqe dvvnndgvee gkkeqksvvk eykpqvlhpn vlkrdqsyeq
      121 ygainkqeed rrlvdcgaqr sllghspk
//
LOCUS       XP_016693600             326 aa            linear   PLN 06-AUG-2024
DEFINITION  probable isoaspartyl peptidase/L-asparaginase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016693600
VERSION     XP_016693600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838111.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="probable isoaspartyl peptidase/L-asparaginase 2"
                     /calculated_mol_wt=34187
     Region          1..326
                     /region_name="PLN02689"
                     /note="Bifunctional isoaspartyl peptidase/L-asparaginase"
                     /db_xref="CDD:215372"
     Site            order(85,89..91,96,116..121,124,218,223..226,231..233,251,
                     254..255,260..261,264..265,268,283)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271337"
     CDS             1..326
                     /gene="LOC107910301"
                     /coded_by="XM_016838111.2:263..1243"
                     /db_xref="GeneID:107910301"
ORIGIN      
        1 mgawaiavhg gagvdpnlpk erqeeakrll thcldigisa lrsnlpaidv velvvrelet
       61 dplfnsgrgs altdngtvem easimdgpkr rcgavsglst vknpvslarl vmdksphsyl
      121 afsgaedfak kqgvelvdne yfitednvgm lklakeansi lfdyriptig tcgagaaame
      181 splqmnglpi svyapetvgc vvvdkegrca aatstgglmn kmtgrigdsp ligsgtyacd
      241 lcgvsctgeg eaiirstlar evgavmeykg lnlheavdfv innrldegka gliavsknge
      301 vacgfnttgm frgcatedgf mevgvw
//
LOCUS       XP_040944463             363 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-D3-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944463
VERSION     XP_040944463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088529.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..363
                     /product="cyclin-D3-1 isoform X1"
                     /calculated_mol_wt=41681
     Region          85..183
                     /region_name="CYCLIN_AtCycD-like_rpt1"
                     /note="first cyclin box found in plant cyclin-delta
                     family; cd20543"
                     /db_xref="CDD:410246"
     Region          188..279
                     /region_name="CYCLIN_AtCycD-like_rpt2"
                     /note="second cyclin box found in plant cyclin-delta
                     family; cd20544"
                     /db_xref="CDD:410247"
     CDS             1..363
                     /gene="LOC107910726"
                     /coded_by="XM_041088529.1:320..1411"
                     /db_xref="GeneID:107910726"
ORIGIN      
        1 mafnhqhssf vldalycsee nweedqderc fnngindndn qlnpfpille qdlfweddel
       61 sslftkeern qlydslqtng nlagarreav ewvlkvsahy sfsaltallt vnyldrflfs
      121 frfqsekpwm tqlaavacls laakveetqv pllldlqvee tryvfeakti qrmeilvlss
      181 lqwkmnpvtp fsfldyitrr lglkdhlcwe flrrchrill slisdsrfmc ylpsvmatat
      241 mlhvvdsvep nlrveyhnql lgilgidkqe kvneccelim ewatrvegnq snkrrfssip
      301 gspngvmdvs fssdssndsw avasfasvss spepmskktr tqqdqllerl shhapsdflt
      361 iph
//
LOCUS       XP_016694181             362 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-D3-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694181
VERSION     XP_016694181.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838692.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..362
                     /product="cyclin-D3-1 isoform X2"
                     /calculated_mol_wt=41553
     Region          85..183
                     /region_name="CYCLIN_AtCycD-like_rpt1"
                     /note="first cyclin box found in plant cyclin-delta
                     family; cd20543"
                     /db_xref="CDD:410246"
     Region          188..278
                     /region_name="CYCLIN_AtCycD-like_rpt2"
                     /note="second cyclin box found in plant cyclin-delta
                     family; cd20544"
                     /db_xref="CDD:410247"
     CDS             1..362
                     /gene="LOC107910726"
                     /coded_by="XM_016838692.2:408..1496"
                     /db_xref="GeneID:107910726"
ORIGIN      
        1 mafnhqhssf vldalycsee nweedqderc fnngindndn qlnpfpille qdlfweddel
       61 sslftkeern qlydslqtng nlagarreav ewvlkvsahy sfsaltallt vnyldrflfs
      121 frfqsekpwm tqlaavacls laakveetqv pllldlqvee tryvfeakti qrmeilvlss
      181 lqwkmnpvtp fsfldyitrr lglkdhlcwe flrrchrill slisdsrfmc ylpsvmatat
      241 mlhvvdsvep nlrveyhnql lgilgidkek vneccelime watrvegnqs nkrrfssipg
      301 spngvmdvsf ssdssndswa vasfasvsss pepmskktrt qqdqllerls hhapsdflti
      361 ph
//
LOCUS       XP_040944464             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944464
VERSION     XP_040944464.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088530.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15806
     Region          40..>86
                     /region_name="DUF3223"
                     /note="Protein of unknown function (DUF3223); pfam11523"
                     /db_xref="CDD:431917"
     CDS             1..136
                     /gene="LOC121214647"
                     /coded_by="XM_041088530.1:159..569"
                     /db_xref="GeneID:121214647"
ORIGIN      
        1 mpsvrdpkky hmlndpdykk tkdkeeeilr diqpiislar eilhsnrnkd gerltvadee
       61 avvemllryh phsedkigcg ldsimvsfcw hylllwvslf wfelldnqty llgkktskyf
      121 hsqvcsvnqf ggfisg
//
LOCUS       XP_040944465             120 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-conjugating enzyme E2 37 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944465
VERSION     XP_040944465.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088531.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..120
                     /product="probable ubiquitin-conjugating enzyme E2 37
                     isoform X1"
                     /calculated_mol_wt=13643
     Region          10..>106
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..120
                     /gene="LOC107910728"
                     /coded_by="XM_041088531.1:193..555"
                     /db_xref="GeneID:107910728"
ORIGIN      
        1 maqearlklr mqkelklllv dpphgasfpt lssqsnitdl ssihaqigle etfyskgifk
       61 ikvqipkryp lqlpivtfgt piyysnidng dflkiynkgs gqcmwrinkk nknnhymtiv
//
LOCUS       XP_016694182              99 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ubiquitin-conjugating enzyme E2 37 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694182
VERSION     XP_016694182.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838693.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..99
                     /product="probable ubiquitin-conjugating enzyme E2 37
                     isoform X2"
                     /calculated_mol_wt=11137
     Region          10..>94
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..99
                     /gene="LOC107910728"
                     /coded_by="XM_016838693.2:185..484"
                     /db_xref="GeneID:107910728"
ORIGIN      
        1 maqearlklr mqkelklllv dpphgasfpt lssqsnitdl ssihaqigle etfyskgifk
       61 ikvqipkryp lqlpivtfgt piyysnidng dflkiynkv
//
LOCUS       XP_016694060             384 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate and iron-dependent oxygenase domain-containing
            protein CP2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694060
VERSION     XP_016694060.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838571.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein CP2 isoform X1"
                     /calculated_mol_wt=44412
     Region          165..335
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..384
                     /gene="LOC107910642"
                     /coded_by="XM_016838571.2:599..1753"
                     /db_xref="GeneID:107910642"
ORIGIN      
        1 mslevtrken qqptpptggh ngngmallqs matthrlrln pntehkpesy eglhlefspl
       61 lfsslerylp plmlshsrds klhymrdiil ryspegertr vqkqreyrqk iishyqplhr
      121 elyamhatnf fapsflkain enkeesfrsi maeptqgvft femlqphfce lllsevenfe
      181 kwvhetkfri mrpntmnkfg avlddfglet mlgklmedfi rpiskvffsd vggstldshh
      241 gfvveyginr dvelgfhvdd sevtlnvclg kqfsggdlff rgvrcdkhvn tetqsdeild
      301 yshvpgravl hrgrhrhgar attsghrvnl llwcrssvfr elrkyqkdfs swcgecqrek
      361 kerqrvsiaa tkqellkreg kpat
//
LOCUS       XP_016694061             380 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate and iron-dependent oxygenase domain-containing
            protein CP2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694061
VERSION     XP_016694061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838572.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..380
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein CP2 isoform X2"
                     /calculated_mol_wt=43928
     Region          165..335
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..380
                     /gene="LOC107910642"
                     /coded_by="XM_016838572.2:494..1636"
                     /db_xref="GeneID:107910642"
ORIGIN      
        1 mslevtrken qqptpptggh ngngmallqs matthrlrln pntehkpesy eglhlefspl
       61 lfsslerylp plmlshsrds klhymrdiil ryspegertr vqkqreyrqk iishyqplhr
      121 elyamhatnf fapsflkain enkeesfrsi maeptqgvft femlqphfce lllsevenfe
      181 kwvhetkfri mrpntmnkfg avlddfglet mlgklmedfi rpiskvffsd vggstldshh
      241 gfvveyginr dvelgfhvdd sevtlnvclg kqfsggdlff rgvrcdkhvn tetqsdeild
      301 yshvpgravl hrgrhrhgar attsghrvnl llwcrssvfr elrkyqkdfs swcgecqrek
      361 kerqrvsiaa tkqregkpat
//
LOCUS       XP_040944466             338 aa            linear   PLN 06-AUG-2024
DEFINITION  2-oxoglutarate and iron-dependent oxygenase domain-containing
            protein CP2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944466
VERSION     XP_040944466.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088532.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein CP2 isoform X3"
                     /calculated_mol_wt=38909
     Region          165..335
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..338
                     /gene="LOC107910642"
                     /coded_by="XM_041088532.1:495..1511"
                     /db_xref="GeneID:107910642"
ORIGIN      
        1 mslevtrken qqptpptggh ngngmallqs matthrlrln pntehkpesy eglhlefspl
       61 lfsslerylp plmlshsrds klhymrdiil ryspegertr vqkqreyrqk iishyqplhr
      121 elyamhatnf fapsflkain enkeesfrsi maeptqgvft femlqphfce lllsevenfe
      181 kwvhetkfri mrpntmnkfg avlddfglet mlgklmedfi rpiskvffsd vggstldshh
      241 gfvveyginr dvelgfhvdd sevtlnvclg kqfsggdlff rgvrcdkhvn tetqsdeild
      301 yshvpgravl hrgrhrhgar attsghrvnl llwcrslp
//
LOCUS       XP_016691107             277 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691107
VERSION     XP_016691107.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835618.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..277
                     /product="uncharacterized protein"
                     /calculated_mol_wt=30313
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..227
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..277
                     /gene="LOC107908447"
                     /coded_by="XM_016835618.2:203..1036"
                     /db_xref="GeneID:107908447"
ORIGIN      
        1 msdhlvlyvd rlvrpvplqp vesevgpste isgpscspke keifrgggee epliqtaecr
       61 icqeedsven letpcacsgs lkyahrkcvq hwcnekgdii ceichqpyqp gyiapsrpqt
      121 eetaidiggg wtisgtpvdl rdprllaiae aerqileaey deyaasnasg aafcrsaali
      181 lmallllrha ltvpdadaed dvstffslfl lraagfllpc yimawaisil qrqrqrqeaa
      241 alaatqvafv lqsgqrrgmh ftiasgptmt thhqesi
//
LOCUS       XP_016691106             531 aa            linear   PLN 06-AUG-2024
DEFINITION  (R)-mandelonitrile lyase-like [Gossypium hirsutum].
ACCESSION   XP_016691106
VERSION     XP_016691106.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835617.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691106.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..531
                     /product="(R)-mandelonitrile lyase-like"
                     /calculated_mol_wt=57938
     Region          19..528
                     /region_name="PLN02785"
                     /note="Protein HOTHEAD"
                     /db_xref="CDD:215420"
     CDS             1..531
                     /gene="LOC107908446"
                     /coded_by="XM_016835617.2:20..1615"
                     /db_xref="GeneID:107908446"
ORIGIN      
        1 meaikfqntv hhdriliafi flfvdlslcs psqtqgelpy itsdvkevag ksfdyivvgg
       61 gtagcplaat lsekfsvllv erggspygnp wvmekryygf sliqtdefss vaqdfksadg
      121 vrncrgrvlg gssainggfy srasedfidk vgwdkelvkd aytwveskiv sipeltpwqt
      181 vvefglleag ilpyngysle hiegtkiggs ifdvwgirht sadllkaanp knivvalnat
      241 vkniifegng nasertvkgi rfiksdgttd qtyeaylnqp knctsngdvi lsagalgspq
      301 illssgighr ehfkkfsiph vvnlkgvgkk mkdnpsiavl vdtnpqnrlp dppqvsgiak
      361 dlkfiieggi iptgfnatrm piaakiafpv segelklsst dprqnpsvkf nyladendld
      421 dcanmvhlle rvaksesiaf ylgvkpqnnl mtstdgqrkf ckanvrtyyh yhggctvgsv
      481 vdndykvygv kglrvvdgst flespgtnpm atllmlgryq gvkilrereh v
//
LOCUS       XP_016693132             750 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHROMATIN REMODELING 19 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693132
VERSION     XP_016693132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..750
                     /product="protein CHROMATIN REMODELING 19 isoform X1"
                     /calculated_mol_wt=84950
     Region          <180..724
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     CDS             1..750
                     /gene="LOC107909934"
                     /coded_by="XM_016837643.2:186..2438"
                     /db_xref="GeneID:107909934"
ORIGIN      
        1 mkrvfeeisd eewenhsfkp srvlkknpnp ppiesfafns qtqasfsdqs sddcveiehl
       61 addsnleddv epedagpvnl arrfivdedd ddeedgdgkd gnenafeely diesseeeql
      121 qeddvvgkal qkcakisael rkelygssga sceryaevea ssvrivtqnd idaacavvdp
      181 efqpvlkpyq lvgvnfllll hskgigggdg csfffmmpct mliailadem glgktiqait
      241 yltllkhlkn dpgphlivcp asllenwere lkkwcpsfsv lqyhgagras yskelgylsk
      301 aglpppfnvl lacyslferh svqqkddrki lkrwkwscvl mdeahalkdk nsyrwknlms
      361 varnakqrlm ltgtplqndl helwsllefm mpdlfateyv dlkkllnaed religrmksi
      421 lgpfilrrlk sdvmqqlvpk iqqveyvime khqenayrea ieeyrtisra riaklsepdl
      481 nniigiiprr qisnyfvqfr kianhpllvr riyddddvgr fakrlhsigv fectldrvve
      541 elknysdfsi hqlllrygit ggkgtlsdeh vmlsakcqal aellpslkrs ghrvlifsqw
      601 tsmldilewt ldvigvtyrr ldgstqvtdr qtivddfnnd tsifacllst raggqglnlt
      661 gadtvvihdm dfnpqidrqa edrchrigqt rpvtiyrlvt kgtvdenvye iakrkltlda
      721 avlesgldvg neddtsektm gqilssllms
//
LOCUS       XP_016693133             734 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CHROMATIN REMODELING 19 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693133
VERSION     XP_016693133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837644.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..734
                     /product="protein CHROMATIN REMODELING 19 isoform X2"
                     /calculated_mol_wt=83168
     Region          <180..708
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     CDS             1..734
                     /gene="LOC107909934"
                     /coded_by="XM_016837644.2:188..2392"
                     /db_xref="GeneID:107909934"
ORIGIN      
        1 mkrvfeeisd eewenhsfkp srvlkknpnp ppiesfafns qtqasfsdqs sddcveiehl
       61 addsnleddv epedagpvnl arrfivdedd ddeedgdgkd gnenafeely diesseeeql
      121 qeddvvgkal qkcakisael rkelygssga sceryaevea ssvrivtqnd idaacavvdp
      181 efqpvlkpyq lvgvnfllll hskgiggail ademglgkti qaityltllk hlkndpgphl
      241 ivcpasllen werelkkwcp sfsvlqyhga grasyskelg ylskaglppp fnvllacysl
      301 ferhsvqqkd drkilkrwkw scvlmdeaha lkdknsyrwk nlmsvarnak qrlmltgtpl
      361 qndlhelwsl lefmmpdlfa teyvdlkkll naedreligr mksilgpfil rrlksdvmqq
      421 lvpkiqqvey vimekhqena yreaieeyrt israriakls epdlnniigi iprrqisnyf
      481 vqfrkianhp llvrriyddd dvgrfakrlh sigvfectld rvveelknys dfsihqlllr
      541 ygitggkgtl sdehvmlsak cqalaellps lkrsghrvli fsqwtsmldi lewtldvigv
      601 tyrrldgstq vtdrqtivdd fnndtsifac llstraggqg lnltgadtvv ihdmdfnpqi
      661 drqaedrchr igqtrpvtiy rlvtkgtvde nvyeiakrkl tldaavlesg ldvgneddts
      721 ektmgqilss llms
//
LOCUS       XP_016694095             570 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase tricornered [Gossypium hirsutum].
ACCESSION   XP_016694095
VERSION     XP_016694095.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838606.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694095.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..570
                     /product="serine/threonine-protein kinase tricornered"
                     /calculated_mol_wt=65755
     Region          59..117
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cd21742"
                     /db_xref="CDD:439267"
     Site            order(59..61,63..64,67..68,71,74,78,103,106..108,110..111,
                     114..115)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439267"
     Region          120..491
                     /region_name="STKc_NDR_like"
                     /note="Catalytic domain of Nuclear Dbf2-Related
                     kinase-like Protein Serine/Threonine Kinases; cd05599"
                     /db_xref="CDD:270750"
     Site            order(128..132,136,149,151,183,199..200,202,206,208,245,
                     247,249..250,252,262..263,266,327..332,359,365,368)
                     /site_type="active"
                     /db_xref="CDD:270750"
     Site            order(128..132,136,149,151,183,200..202,206,245,247,
                     249..250,252,262..263)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270750"
     Site            order(132,206,208,245,247,249,266,327..332,359,365,368)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270750"
     Site            order(262..274,323..332)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270750"
     Site            485..490
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270750"
     CDS             1..570
                     /gene="LOC107910668"
                     /coded_by="XM_016838606.2:661..2373"
                     /db_xref="GeneID:107910668"
ORIGIN      
        1 mdsarswfkk fqhknekven spkkkkdlen akyahkppid gaeapstatk qkaaaakqyi
       61 enhykaqmkn lqdrkerrwm lerkladadv taeeqmnmlk flekketeym rlqrhkmgvd
      121 dfelltiigr gafgevrlck ekatsnvyam kklqksemlr rgqvehvkae rnllaevdse
      181 civklycsfq ddeylylvme ylpggdmmtl lmrkdtlted earfyvgqtv laiesihkhn
      241 yihrdikpdn llldrnghmk lsdfglckpl dsssfpdlre ddhgggrnlk pstesgkhsn
      301 vpttprrtqq eqllhwqknr rtlaystvgt pdyiapevll krgygmecdw wslgaimfem
      361 lvgyppfyse eplstcrkiv nwrthlkfpe eaklsaeakd lirkllcnve qrlgtkgaye
      421 ikahpwfkdi ewgrlyqiea afmpevnsdl dtqnfekfee lgaqvqsstr sgpwrkmlss
      481 kdanfvgyty knveivkehh lpgiaevkkk snapkrpsvk slfdtpgppd pptkgsflnl
      541 lptqleepes pvsehqsira tqyprkplhr
//
LOCUS       XP_016694157             980 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein kinase CLAVATA1 [Gossypium hirsutum].
ACCESSION   XP_016694157
VERSION     XP_016694157.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838668.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694157.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..980
                     /product="receptor protein kinase CLAVATA1"
                     /calculated_mol_wt=107936
     Region          6..976
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          146..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          170..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          194..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..362
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..360
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          363..386
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          387..457
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          435..455
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          458..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          482..505
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          530..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          554..577
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..980
                     /gene="LOC107910708"
                     /coded_by="XM_016838668.2:512..3454"
                     /db_xref="GeneID:107910708"
ORIGIN      
        1 mrsfysyllc vfsslllpfs aivygysdle vllllkssmi gpkgsglenw efssspsahc
       61 rfsgvqcded fsvvalnvsf aplfgtippe igllnklvnl tissdsltgr ipvemgnlts
      121 lkifnisnnv fqgsfpgeif agmthleild aynnnftgvl pievvnlkyl khlsfggnff
      181 mgeipeeyse iqsleylgln gigltgktps flarltnlky lvigyfnayd ggippeygsl
      241 sqlelldmas cnltgeipss lsnlkhlhsl flqlnrltgr ipsqlsglis lksldlsine
      301 ltgeipdsfs alnkitlinl fknnlygsip sfvgdyphle vfqvwgnnft felpqnlgrn
      361 gklykldvas nhltgliprd lckggrletl immenfffgp lpeelgncks ltkirimknl
      421 lngtipagif nlpllsimel ggnffsgelp sqmsgaslgq lkisnnwisg kippaignlr
      481 slqvlslemn kfsgeipgei fnikflskmn isdnnitgei ppsisrctsl tsidfsrnsf
      541 tgeipdgide lkdlsilnfs rnqltgeipa eirnmisltt ldlsynylvg ripiggqflv
      601 fndssftgnl nlcprhvncp slgnqtrgsg hghavsftas kliitiitfm tallliiitv
      661 yrirrkrlqk srawkltafq rldfkaedvl eclknenvig kggagivyrg smpdgldvai
      721 krlvggrnds gfsaeiqtlg rirhrnivrl lgyvsnkdtn lllyeympng slgemlhgpk
      781 gahlqwerry tialeaargl cylhhdcspl iihrdvksnn illgedyeah vadfglakfl
      841 qdagasecms siagsygyia peyaytlrvd eksdvysfgv vlleliagrk pvgefgdgvd
      901 ivrwvrkmts eqpqpsdpas vlaildprls eypvtavnhl fkvammcved estarpsmre
      961 vvhmltnppq saqrpslltf
//
LOCUS       XP_016747837              84 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokines 3 [Gossypium hirsutum].
ACCESSION   XP_016747837
VERSION     XP_016747837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016892348.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..84
                     /product="phytosulfokines 3"
                     /calculated_mol_wt=9369
     Region          <52..81
                     /region_name="PSK"
                     /note="Phytosulfokine precursor protein (PSK); pfam06404"
                     /db_xref="CDD:399419"
     CDS             1..84
                     /gene="LOC107956852"
                     /coded_by="XM_016892348.2:334..588"
                     /db_xref="GeneID:107956852"
ORIGIN      
        1 mkikmaksff flilalllls taenrplstt nrqqaddpqm pfsspessft dddeckglng
       61 eeclikrsli ahtdyiytqr nvgp
//
LOCUS       XP_016693855             505 aa            linear   PLN 06-AUG-2024
DEFINITION  anthocyanidin 3-O-glucosyltransferase 2 [Gossypium hirsutum].
ACCESSION   XP_016693855
VERSION     XP_016693855.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693855.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..505
                     /product="anthocyanidin 3-O-glucosyltransferase 2"
                     /calculated_mol_wt=56015
     Region          35..502
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            order(45..46,48,212,215..216,243,301,387,389,391..392,395)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(45,301,387,389,391..392)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            46
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..505
                     /gene="LOC107910511"
                     /coded_by="XM_016838366.2:24..1541"
                     /db_xref="GeneID:107910511"
ORIGIN      
        1 mastlsmist dlivscsvps rftvfrsvsv vvmaelvfip msrmghfapm velarllvdl
       61 hselsitvli lklnpdaqva ayihsltatr ikfihlpqpe tqkdisfsnh isnlqahapl
      121 vkdatnnilh hsssrfigfv fdlfltpfid vgnqlgvpsy vfyassaafl gfqsqaldlq
      181 deqnvnivel kdsdteftip syinpvsskl fptillnpes nsmattlvrw lrkakgimin
      241 tfweleshai sslsngsvpp vypvgpildl erksevhqns dimkwldeqp pssvvflcfg
      301 tggnfnedqv keiasaleqs ghrflwslrq ppdpfkgpma sqtdyddase ilpegfldrt
      361 hgigkiigwa pqvailghpa iggfvshcgw nsilesiwfg vpiatwplya eqqlnafklv
      421 telgiaveik mdyrievign geveilraet iekgircmmd kgrdarkrvk emsekirral
      481 mdggsshsti rdfindvmgs mpkkn
//
LOCUS       XP_016691053             471 aa            linear   PLN 06-AUG-2024
DEFINITION  triacylglycerol lipase OBL1 [Gossypium hirsutum].
ACCESSION   XP_016691053
VERSION     XP_016691053.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835564.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..471
                     /product="triacylglycerol lipase OBL1"
                     /calculated_mol_wt=54970
     Region          13..471
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Site            order(208..209,213..221)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            289..293
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..471
                     /gene="LOC107908397"
                     /coded_by="XM_016835564.1:37..1452"
                     /db_xref="GeneID:107908397"
ORIGIN      
        1 masnknrfyd dcfiinseka syldllgllv ssklkqrrfi dapeqhnhrf rrrlvvfgmv
       61 llqkllslvr iplalteivv vtllnlltyn gglsglllnl mkgklvwpek ssemyrsmlg
      121 nvdtrveldn nikpgdpkyk allsmmaskl syeneafikt viiqhwkmkf lkfysfwndf
      181 eersttqafm mqdtqsnpnl ivvafrgtqp fsaydwktnv diswyelkdm gkgkihsgfm
      241 kalgmqktkg wpkeiqqsth qhqfayytlr qklrevlqen qdarlivtgh slgsalavlf
      301 vavlmlheee wllekleavy tfgqprvgdh kfgefmidkl rkfdvkyfry vysndmvari
      361 ppdddtflsk hfgpcfyfns fyngkvlsee pnknyfswlw eipkrmiavw elirafilpy
      421 mkgpeykenw vmitlrimgl vtpgmsahmp qdyvnsirlg tlpsvhqlkr d
//
LOCUS       XP_016693197            1012 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: phytosulfokine receptor 1-like [Gossypium
            hirsutum].
ACCESSION   XP_016693197
VERSION     XP_016693197.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837708.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693197.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1012
                     /product="LOW QUALITY PROTEIN: phytosulfokine receptor
                     1-like"
                     /calculated_mol_wt=112624
     Region          2..1011
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          99..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          146..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..338
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          414..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          438..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          524..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..569
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          570..593
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1012
                     /gene="LOC107909981"
                     /coded_by="XM_016837708.2:326..3364"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107909981"
ORIGIN      
        1 mgaqgcwamv iilglllqpq flssqnltcn qkdwtalryf mgnltktleg wttnssadcc
       61 ewegitcdpp sagrviklvl pnkrlsgkls dslsgldqlk tlnlshnflk dslplslfhm
      121 pnleqldlsy ndfsglipes inlpsirsln vsanslkgsl pshicvnstg igflslavny
      181 fsgnispglg kcssleelyl gtnqltgvvt edifqlqnlr rlglqdnnlg gklspgianl
      241 snlvrldiss nnfsgeipdv fselkrfqyl iansnnfsgg ipsslsnspt vsllnlrnns
      301 legsiylncs amvtlnsldl atnkftgpvp dnlplcrqlq dvnlarnnfs gqipesfkqf
      361 hslsylslsn sslhnlssal qilqqcrnlt alvltlnfpv etlpddpnlh feklkvlvia
      421 scqlrgsipq wlskisslql ldlswnhlng alppwlgsyr dlfyldlsnn sftgeipksl
      481 telpslihgn isleepspxf pffmkrnesa rglqynqiws fpptlelghn flsgpvwpef
      541 gnlkklivfd lkfnnlsgpi penlsemssl eildlshndl tgtippsles lsflsifnva
      601 ynrlygkips ggqfqtfpns sfegnnlcgd hrfscqdnts ehvspkrsrk nkdiiigmvv
      661 giifgtalli glmylfvlrt hkrnevdpek eepdtndknl eelssrlvvl fqnwesykel
      721 ciddllestn nfdqaniigc ggfglvyrgt lpdgrkvaik rlsgdcgqmd refraeveal
      781 sraqhpnlvh lqgycmhknd rlliysymen gsldywlhek vdgpsllswe trlkiaqgaa
      841 rglaylhqsc ephilhrdik ssnilldenf kahladfgla rlilpydthv ttdlvgtlgy
      901 ippeygqasv atykgdvysf gvvllelltg krpmdmckpk gtrdliswvi rmkmenkese
      961 vfdpfiygkq hdkemlrvle iaclclnesp kirpttqqlv ywldkvtsls sv
//
LOCUS       XP_016694212             320 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694212
VERSION     XP_016694212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838723.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..320
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35327
     CDS             1..320
                     /gene="LOC107910748"
                     /coded_by="XM_016838723.2:175..1137"
                     /db_xref="GeneID:107910748"
ORIGIN      
        1 mhaktdsevt slapssptrs prrpvyyvqs psrdshdgek tttsfhstpv ispmgspphs
       61 hssmgrhsre ssssrfsgsl kpgsrkispn dapsrgahrk gnkqwkecdv ieeegllede
      121 ereqglprrc yvlafilgff llfslfslil wgasrpqkpk itmksirfeq fkiqagsdft
      181 gvatdmitmn stvkmiyrna gtffgvhvts tpldlsyaqi tiasgtmkkf hqsrksqrsl
      241 tvivmgnkvp lygsgaslsc stgttslpvs lkvsfivrsr ayvlgklvkp kfykkiecdv
      301 tfdpkklnvp islkkactyd
//
LOCUS       XP_040944467             221 aa            linear   PLN 06-AUG-2024
DEFINITION  ACD11 homolog protein [Gossypium hirsutum].
ACCESSION   XP_040944467
VERSION     XP_040944467.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088533.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="ACD11 homolog protein"
                     /calculated_mol_wt=24950
     Region          47..181
                     /region_name="GLTP"
                     /note="Glycolipid transfer protein (GLTP); pfam08718"
                     /db_xref="CDD:462575"
     CDS             1..221
                     /gene="LOC107944866"
                     /coded_by="XM_041088533.1:143..808"
                     /db_xref="GeneID:107944866"
ORIGIN      
        1 mdegadngfn hsqtkmsmtt ktplsdiaka feelsgflgs qtkdqklrld nfceacslvs
       61 vlfsclglaf kfaemeyvak vhdlveaskt yttlenvldr dvandtvkkp gshsrnlrrv
      121 rqgldliral feefmstddy ylkdaastay sqvcapyhtw avrtavsagm ytlptreell
      181 qklnetdhta ekkmrryiea srpviayidk lyssrkiald w
//
LOCUS       XP_040944468             459 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944468
VERSION     XP_040944468.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088534.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..459
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51236
     Region          19..182
                     /region_name="Ist1"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     pfam03398"
                     /db_xref="CDD:460910"
     CDS             1..459
                     /gene="LOC121214649"
                     /coded_by="XM_041088534.1:334..1713"
                     /db_xref="GeneID:121214649"
ORIGIN      
        1 mgkkldallg rgfkpyklks visvalsrls vfknqrqirs nqarsdvvql lqlghhdral
       61 lraeqvvkek nmldvfvile gycnllierl hlieqdrecp delkeaisgl lfassrcgdf
      121 pelqeiraif tsrygkefva raielrnncg vntkiiqkls tkqpdlqsrw nvlneiaaeh
      181 sialqlrets vsatlenldg sknhsqpklg tigkasnhav lvddnefsds tkarkkykdv
      241 adaaqaafes aanaaaaara avelsrsdfh dpdddddddd dqnspnsqrk rvlerqepns
      301 edketqqgnq aedlkqtpei kisspssskd ssqgnldirt vslddvdpik llekevvihe
      361 sddenydshd ssfhmntsmf kvraqdedkn yectektalm fqnssdkqip sslraglkve
      421 avpenptehv aqssgtkgkr pftinkapfs vrtrqvrgy
//
LOCUS       XP_016666821             163 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein 3-1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016666821
VERSION     XP_016666821.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666821.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="30S ribosomal protein 3-1, chloroplastic"
                     /calculated_mol_wt=18352
     Region          80..161
                     /region_name="ycf65"
                     /note="putative ribosomal protein 3; Validated; CHL00163"
                     /db_xref="CDD:214381"
     CDS             1..163
                     /gene="LOC107887169"
                     /coded_by="XM_016811332.2:196..687"
                     /db_xref="GeneID:107887169"
ORIGIN      
        1 mlsmatsstl httftchsfr yqksfntpfc fnknpilkkt iktptltasv ateavtetet
       61 psdfiipqkp eevvkqvgkp rlvlkfiwme kniglaldqv ipghgtvpls pyffwprkda
      121 weelkatles kpwisqkkmi illnqatdii nlwqqsggnl sqs
//
LOCUS       XP_016666817             841 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 25 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016666817
VERSION     XP_016666817.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666817.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..841
                     /product="mediator of RNA polymerase II transcription
                     subunit 25 isoform X1"
                     /calculated_mol_wt=89979
     Region          5..232
                     /region_name="Med25_VWA"
                     /note="Mediator complex subunit 25 von Willebrand factor
                     type A; pfam11265"
                     /db_xref="CDD:463253"
     Region          <240..550
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..841
                     /gene="LOC107887167"
                     /coded_by="XM_016811328.2:99..2624"
                     /db_xref="GeneID:107887167"
ORIGIN      
        1 maekqlivav egtaamgpyw qiilsdylek iircfcsnef agqknttsnv elslvtfnth
       61 gsycaclvqr sgwtkdvdif lqwlsaipfs gggfndaaia eglsealmsf dvaqmfpiaa
      121 ngnqthqiad gqrhcilvaa snpyplptpv yrpqtqnleq senmesqtes rlsdaetvak
      181 sfpqcsvsls vicpkqlskl kaiysagkrn prasdppvdn vrnpqflvli senfmegcaa
      241 lsrsgvpsla pnqspvkmdm asvnavagtp ptsvpsvngs imsrqpvsag nvptatvkve
      301 pttitsmang pafphipsvp rapfqavptl qtssplttte evmrssdnvq eikpsvggmt
      361 qplrpvppaa anvnilnnls qarvmnsaal sggtsiglqs mgqtpvamhm snmissgmts
      421 svplaqtvys sgqsgmtslp gsgavtgttq vppnsnlnsf asatsnvagn snigisqpmc
      481 nvqgavsmgq svpgsmsqgn hsgaqlvqtg vamsqsmsgl gpstvssgtg tlipapgmsq
      541 qvqsgmqtlg vnnnsaasmp lsqqtssalq saqskyvkvw egnlsgqrqg qpvfitrleg
      601 yrsasasetl asdwpqtmqi vrlisqdhmn nkqyvgkadf lvframnqhg flgqlqekkl
      661 caviqlpsqt lmlsvsdkay rligmlfpgd mvvfkpqiss qhqqqqqqmq pllqqqqmpq
      721 qqlpqlqqqq qqqqqlpqlq qqqqqqpqqq qplphlqqqq lpqlqqqqqq qqqqlsqlqq
      781 qqmpqlqqqp qlaqmqqqqq qmvgsgmnsa yvqgpgrsql vsqgqvssqa psnmpgggfm
      841 s
//
LOCUS       XP_016666818             835 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 25 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016666818
VERSION     XP_016666818.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666818.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..835
                     /product="mediator of RNA polymerase II transcription
                     subunit 25 isoform X2"
                     /calculated_mol_wt=89331
     Region          5..226
                     /region_name="Med25_VWA"
                     /note="Mediator complex subunit 25 von Willebrand factor
                     type A; pfam11265"
                     /db_xref="CDD:463253"
     Region          <234..544
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..835
                     /gene="LOC107887167"
                     /coded_by="XM_016811329.2:99..2606"
                     /db_xref="GeneID:107887167"
ORIGIN      
        1 maekqlivav egtaamgpyw qiilsdylek iircfcsnef agqknttsnv elslvtfnth
       61 gsycaclvqr sgwtkdvdif lqwlsaipfs gggfndaaia eglsealmmf piaangnqth
      121 qiadgqrhci lvaasnpypl ptpvyrpqtq nleqsenmes qtesrlsdae tvaksfpqcs
      181 vslsvicpkq lsklkaiysa gkrnprasdp pvdnvrnpqf lvlisenfme gcaalsrsgv
      241 pslapnqspv kmdmasvnav agtpptsvps vngsimsrqp vsagnvptat vkvepttits
      301 mangpafphi psvprapfqa vptlqtsspl ttteevmrss dnvqeikpsv ggmtqplrpv
      361 ppaaanvnil nnlsqarvmn saalsggtsi glqsmgqtpv amhmsnmiss gmtssvplaq
      421 tvyssgqsgm tslpgsgavt gttqvppnsn lnsfasatsn vagnsnigis qpmcnvqgav
      481 smgqsvpgsm sqgnhsgaql vqtgvamsqs msglgpstvs sgtgtlipap gmsqqvqsgm
      541 qtlgvnnnsa asmplsqqts salqsaqsky vkvwegnlsg qrqgqpvfit rlegyrsasa
      601 setlasdwpq tmqivrlisq dhmnnkqyvg kadflvfram nqhgflgqlq ekklcaviql
      661 psqtlmlsvs dkayrligml fpgdmvvfkp qissqhqqqq qqmqpllqqq qmpqqqlpql
      721 qqqqqqqqql pqlqqqqqqq pqqqqplphl qqqqlpqlqq qqqqqqqqls qlqqqqmpql
      781 qqqpqlaqmq qqqqqmvgsg mnsayvqgpg rsqlvsqgqv ssqapsnmpg ggfms
//
LOCUS       XP_016666819             727 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 25 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016666819
VERSION     XP_016666819.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666819.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..727
                     /product="mediator of RNA polymerase II transcription
                     subunit 25 isoform X3"
                     /calculated_mol_wt=77545
     Region          <18..118
                     /region_name="Med25_VWA"
                     /note="Mediator complex subunit 25 von Willebrand factor
                     type A; pfam11265"
                     /db_xref="CDD:463253"
     Region          <126..436
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..727
                     /gene="LOC107887167"
                     /coded_by="XM_016811330.2:137..2320"
                     /db_xref="GeneID:107887167"
ORIGIN      
        1 mfpiaangnq thqiadgqrh cilvaasnpy plptpvyrpq tqnleqsenm esqtesrlsd
       61 aetvaksfpq csvslsvicp kqlsklkaiy sagkrnpras dppvdnvrnp qflvlisenf
      121 megcaalsrs gvpslapnqs pvkmdmasvn avagtpptsv psvngsimsr qpvsagnvpt
      181 atvkveptti tsmangpafp hipsvprapf qavptlqtss plttteevmr ssdnvqeikp
      241 svggmtqplr pvppaaanvn ilnnlsqarv mnsaalsggt siglqsmgqt pvamhmsnmi
      301 ssgmtssvpl aqtvyssgqs gmtslpgsga vtgttqvppn snlnsfasat snvagnsnig
      361 isqpmcnvqg avsmgqsvpg smsqgnhsga qlvqtgvams qsmsglgpst vssgtgtlip
      421 apgmsqqvqs gmqtlgvnnn saasmplsqq tssalqsaqs kyvkvwegnl sgqrqgqpvf
      481 itrlegyrsa sasetlasdw pqtmqivrli sqdhmnnkqy vgkadflvfr amnqhgflgq
      541 lqekklcavi qlpsqtlmls vsdkayrlig mlfpgdmvvf kpqissqhqq qqqqmqpllq
      601 qqqmpqqqlp qlqqqqqqqq qlpqlqqqqq qqpqqqqplp hlqqqqlpql qqqqqqqqqq
      661 lsqlqqqqmp qlqqqpqlaq mqqqqqqmvg sgmnsayvqg pgrsqlvsqg qvssqapsnm
      721 pgggfms
//
LOCUS       XP_016666816             346 aa            linear   PLN 06-AUG-2024
DEFINITION  AP2/ERF and B3 domain-containing transcription factor RAV1
            [Gossypium hirsutum].
ACCESSION   XP_016666816
VERSION     XP_016666816.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811327.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666816.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="AP2/ERF and B3 domain-containing transcription
                     factor RAV1"
                     /calculated_mol_wt=38169
     Region          59..120
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(61..62,64,66,68,70,74,76,81,83,86)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     Region          189..293
                     /region_name="B3"
                     /note="B3 DNA binding domain; pfam02362"
                     /db_xref="CDD:396783"
     Site            order(191,194,202,205,207,242,253,255..256,258..259)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..346
                     /gene="LOC107887166"
                     /coded_by="XM_016811327.2:376..1416"
                     /db_xref="GeneID:107887166"
ORIGIN      
        1 mdggciaide sttsdsmsis issllppvtk ypdslcrvgs gtsviveska eskklpssky
       61 kgvvpqpngr wgaqiyekhq rvwlgtfnee deaakaydia aqrfrgpdav tnfkhlqete
      121 edgiemafln thskaeivdm lrkhtyndel eqsrtrrcyg fdgngkrvvg neavfgsfga
      181 evkardqlfe kavtpsdvgk lnrlvipkqh aekyfplqsg gasskgvlln ledvtgkvwr
      241 fkysywnssq syvltkgwsr fvkeknlkag divsfqrstg aekklyihwk aksgvenpvg
      301 lrlfgvkifg gaatgnlgcn ngkrtreigl lalecskkqr aiinal
//
LOCUS       XP_040944469             624 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944469
VERSION     XP_040944469.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088535.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..624
                     /product="receptor-like protein 4 isoform X1"
                     /calculated_mol_wt=68445
     Region          15..577
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          467..489
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          490..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..624
                     /gene="LOC107887012"
                     /coded_by="XM_041088535.1:85..1959"
                     /db_xref="GeneID:107887012"
ORIGIN      
        1 msflvlflls laplfhsssp lpypyntsfh idcgsstpst dsyniswlpd kfftggstsv
       61 vseplhfhlq hektlryfpl ssgkkncyni plpagryyir tftvydnydg kshspsfdas
      121 vegtlvfswr spwpesltrd gaysdlfafv kdgqldlcfy siatnppvia slevvqidpl
      181 synsaqtgds yilvnygrls pgssqwgpgf tsdpdafgrs wqsdsdyrag ksesakvitt
      241 kekitgteka pnyfpmklyq savtiegrle yelpvdakld ylvwfhfaei dstvkkager
      301 vfdvlvndkn vsrvdilkev gsfaayslny teknlsssvl nvklspvaga plicglenya
      361 mvpadlatvp eqvvamkalk dslcvpdrmg wngdpcaptd wdawegvtch tnkngtglvi
      421 tqielgsqgl kgyiseqisl lsnlinlnls tnsldgtlpi glglkslarl dlsdnqfsgs
      481 ipesltssnl qlvrlnnnll egrvpeelys vgvhggtidl sgnkglcgvp plpdcplfwe
      541 ngrlskggki aiglscflfv avlllviylf cirrgrndyd fglpsdlisv aakrnryqrq
      601 kslmllemes qhakglpsvp lnph
//
LOCUS       XP_040944470             623 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944470
VERSION     XP_040944470.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088536.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..623
                     /product="receptor-like protein 4 isoform X2"
                     /calculated_mol_wt=68406
     Region          15..577
                     /region_name="PLN03150"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:178695"
     Region          467..489
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          490..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..623
                     /gene="LOC107887012"
                     /coded_by="XM_041088536.1:85..1956"
                     /db_xref="GeneID:107887012"
ORIGIN      
        1 msflvlflls laplfhsssp lpypyntsfh idcgsstpst dsyniswlpd kfftggstsv
       61 vseplhfhlq hektlryfpl ssgkkncyni plpagryyir tftvydnydg kshspsfdas
      121 vegtlvfswr spwpesltrd gaysdlfafv kdgqldlcfy siatnppvia slevvqidpl
      181 synsaqtgds yilvnygrls pgssqwgpgf tsdpdafgrs wqsdsdyrag ksesakvitt
      241 kekitgteka pnyfpmklyq savtiegrle yelpvdakld ylvwfhfaei dstvkkager
      301 vfdvlvndkn vsrvdilkev gsfaayslny teknlsssvl nvklspvaga plicglenya
      361 mvpadlatvp eqvvamkalk dslcvpdrmg wngdpcaptd wdawegvtch tnkngtglvi
      421 tqielgsqgl kgyiseqisl lsnlinlnls tnsldgtlpi glglkslarl dlsdnqfsgs
      481 ipesltssnl qlvrlnnnll egrvpeelys vgvhggtidl sgnkglcgvp plpdcplfwe
      541 ngrlskggki aiglscflfv avlllviylf cirrgrndyd fglpsdlifa akrnryqrqk
      601 slmllemesq hakglpsvpl nph
//
LOCUS       XP_016666787             468 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016666787
VERSION     XP_016666787.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666787.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..468
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=53478
     Region          43..296
                     /region_name="Tmemb_185A"
                     /note="Transmembrane Fragile-X-F protein; pfam10269"
                     /db_xref="CDD:402059"
     Region          417..462
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..468
                     /gene="LOC107887146"
                     /coded_by="XM_016811298.2:346..1752"
                     /db_xref="GeneID:107887146"
ORIGIN      
        1 mlverrrvmt wrrvgkslqa lvahallfsf tlllalklhh alsyswwvvf splwlfhatv
       61 argrfslpap smphdrdwap fhalistpll vafelllcir ldssyvvnlk ivflpllafe
      121 mailidnirm cralmpgdee smsdeviwet lphfwvaism vffiaattft llklcgdvaa
      181 lgwwdlfinf giaecfaflv ctkwynptih rnshlgesss ssmtirhldw nrglvissde
      241 dshhnsricn lqdigghvmk ipficfqiml fmhlegtpps arnistpilf spllllqgag
      301 vahaayrlie kivillhsga vsgryidiss kvreffgflh hgsrllgwws idegskeeqa
      361 rlyysgasgy ntfspdivkk rpksdlveei wrlqaalseq tevtkysqqe ferlqyekil
      421 crvcfeeqic vvllpcrhhv lcstccekck rcpicrvsie erlpvydv
//
LOCUS       XP_040944471             397 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944471
VERSION     XP_040944471.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088537.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..397
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=45251
     Region          1..225
                     /region_name="Tmemb_185A"
                     /note="Transmembrane Fragile-X-F protein; pfam10269"
                     /db_xref="CDD:402059"
     Region          346..391
                     /region_name="zf-C3HC4_3"
                     /note="Zinc finger, C3HC4 type (RING finger); pfam13920"
                     /db_xref="CDD:464042"
     CDS             1..397
                     /gene="LOC107887146"
                     /coded_by="XM_041088537.1:916..2109"
                     /db_xref="GeneID:107887146"
ORIGIN      
        1 mphdrdwapf halistpllv afelllcirl dssyvvnlki vflpllafem ailidnirmc
       61 ralmpgdees msdeviwetl phfwvaismv ffiaattftl lklcgdvaal gwwdlfinfg
      121 iaecfaflvc tkwynptihr nshlgessss smtirhldwn rglvissded shhnsricnl
      181 qdigghvmki pficfqimlf mhlegtppsa rnistpilfs pllllqgagv ahaayrliek
      241 ivillhsgav sgryidissk vreffgflhh gsrllgwwsi degskeeqar lyysgasgyn
      301 tfspdivkkr pksdlveeiw rlqaalseqt evtkysqqef erlqyekilc rvcfeeqicv
      361 vllpcrhhvl cstccekckr cpicrvsiee rlpvydv
//
LOCUS       XP_016666794             483 aa            linear   PLN 06-AUG-2024
DEFINITION  sialyltransferase-like protein 1 [Gossypium hirsutum].
ACCESSION   XP_016666794
VERSION     XP_016666794.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811305.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666794.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..483
                     /product="sialyltransferase-like protein 1"
                     /calculated_mol_wt=54945
     Region          195..372
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cd19952"
                     /db_xref="CDD:467690"
     Site            order(199..201,222..223,245,299..301,319..320,345..347,
                     361)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..483
                     /gene="LOC107887151"
                     /coded_by="XM_016811305.2:300..1751"
                     /db_xref="GeneID:107887151"
ORIGIN      
        1 mrsrsqfqsh kkstllplvc aaaffslllf giqssffsgr inrkidlgke kvqvsdlspq
       61 elrslaefqt rvqqcvanrg lgltahlvdl ckltlkfpeg tnstwyneqf kvfepleyhy
      121 dicdaillwe qyrnmttvlt reyldarpdg wldyaakria qlgadkcynr tlceehlnvl
      181 lpkkppfhpr qfrtcavvgn sgdllktefg keidshdavi rdneapvnek yakyvglkrd
      241 frlvvrgaar nmikilkgsn devliiksvt hkdfndmiks ipnpvylfqg ivlrrgakgt
      301 gmksielals mcdivdiygf tvdpgytewt ryfstprkgh nplqgrayyq lleclgviri
      361 hspmrakrkq dwsdvpsrem inrahtaalh fkrgpdgqlg qfgsckvwgn vdpdnsgpis
      421 gssdmsdvrk hsnyskwetm pfksirkeaq dhfkqmegvs mykidgnkld dlvcvrhsvn
      481 skg
//
LOCUS       XP_040944472             444 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g26090, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944472
VERSION     XP_040944472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088538.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..444
                     /product="uncharacterized protein At1g26090, chloroplastic
                     isoform X1"
                     /calculated_mol_wt=47908
     Region          51..>202
                     /region_name="ArsA"
                     /note="Arsenical pump-driving ATPase ArsA; cd02035"
                     /db_xref="CDD:349755"
     Site            order(58..65,89,90,192,195)
                     /site_type="active"
                     /db_xref="CDD:349755"
     Region          387..442
                     /region_name="ArsA_HSP20"
                     /note="HSP20-like domain found in ArsA; pfam17886"
                     /db_xref="CDD:436117"
     CDS             1..444
                     /gene="LOC121214651"
                     /coded_by="XM_041088538.1:223..1557"
                     /db_xref="GeneID:121214651"
ORIGIN      
        1 mssglvsspv ifplsnsksk sslwspsrrt isqlsvnngd diidsssntp rlitflgkgg
       61 sgktissvfa aqhyamagls tclvlqgqdr tadcllncki dssptlctrn lsvvrlettk
      121 mlleplnelk kadgrlnltq gvlegvvgee lgvlpgmdsi fsllalvrll glfgkrarkn
      181 hqndkfdiii ydgisteetl rmtgasskar lylkylrsma eksdlgrlag psllrlvdea
      241 mgisgnpsql tgtisadiwd slerilergs sgsyqfgcfl vmnpnipisi ssalrywgca
      301 iqadtqvgga faiptphldv esvenlkknl yplpfacipn lavdspqdwn aimmnnsveg
      361 argllslpas qkvssvifdt akktatllmp gfekseikly qyrggsellv eagdqrrvis
      421 lppqmqgkvg gakfierslv itir
//
LOCUS       XP_040944473             430 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g26090, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944473
VERSION     XP_040944473.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088539.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..430
                     /product="uncharacterized protein At1g26090, chloroplastic
                     isoform X2"
                     /calculated_mol_wt=46706
     Region          51..>202
                     /region_name="ArsA"
                     /note="Arsenical pump-driving ATPase ArsA; cd02035"
                     /db_xref="CDD:349755"
     Site            order(58..65,89,90,192,195)
                     /site_type="active"
                     /db_xref="CDD:349755"
     CDS             1..430
                     /gene="LOC121214651"
                     /coded_by="XM_041088539.1:232..1524"
                     /db_xref="GeneID:121214651"
ORIGIN      
        1 mssglvsspv ifplsnsksk sslwspsrrt isqlsvnngd diidsssntp rlitflgkgg
       61 sgktissvfa aqhyamagls tclvlqgqdr tadcllncki dssptlctrn lsvvrlettk
      121 mlleplnelk kadgrlnltq gvlegvvgee lgvlpgmdsi fsllalvrll glfgkrarkn
      181 hqndkfdiii ydgisteetl rmtgasskar lylkylrsma eksdlgrlag psllrlvdea
      241 mgisgnpsql tgtisadiwd slerilergs sgsyqfgcfl vmnpnipisi ssalrywgca
      301 iqadtqvgga faiptphldv esvenlkknl yplpfacipn lavdspqdwn aimmnnsveg
      361 argllslpas qkvssvifdt akktatllmp gfekseikly qcsieedqsc wwkrgtkdes
      421 flshhkckvr
//
LOCUS       XP_040944474             926 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein RAD16 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944474
VERSION     XP_040944474.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088540.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..926
                     /product="DNA repair protein RAD16 isoform X1"
                     /calculated_mol_wt=104426
     Region          <161..907
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          672..717
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(674,677,689,691,694,697,710,713)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..926
                     /gene="LOC121214653"
                     /coded_by="XM_041088540.1:24..2804"
                     /db_xref="GeneID:121214653"
ORIGIN      
        1 mlrtfppfgw rvkstittph ipaaqslisf sltdhsssfh relnvkftpl tsslpkcsfd
       61 rvkgpptslp mlddlsdset yvpssdsdlg eeeildlnhk avkpapitis dftepptnrg
      121 ngeqilseqn esqfdfnvst akkrnntkrk kkarsgqplm wevweqehek widenltvdv
      181 dldqqnavit etsdassdli ipllryqkew lawalkqeds ntkggilade mgmgktiqai
      241 alvlakrqvl htigepnvss qtagsstdlp rirctlvicp vvavsqwvse idrftsrgsa
      301 kvlvyhganr gknvkqfsey dfvittysiv eaeyrkfmmp pkekcpycgk sfhqkklsvh
      361 lkyycgpdai ktenqskqer kkpksmfksg kkhasnyead srkrgskkka khnredkdrd
      421 fefdetsagk ehnlpegksl lhsvkwerii ldeahfvkdr rcntakavls leslykwals
      481 gtplqnrvge lyslvrflqi vpysyylckd cdcrtldyss stqcpncphn svrhfcwwnk
      541 yvatpiqhyg ngeigkrami llkhkilkni vlrrtkkgra adlalpprii slrrdamdik
      601 etdyyeslys esqaqfntyv qagtvmnnya hifdlltrlr qavdhpylvv ysstaaqrag
      661 nmvngdrndd eqvcgicndp aedpvvtaca hvfckaclid fsaslgnvsc pscsrlltvd
      721 lttnadggqs skttlkgfks ssilnriqln dfqtstkiea lreeirfmve rdgsakgivf
      781 sqftsfldli kyslhkssik cvqlvgsmsl aardaaiksf tedpdckifl mslkaggval
      841 nltvashvfl mdpwwnpave rqaqdrihri gqckpirivr fvientieer ilklqekkel
      901 vfegtvggst ealgkltead mrflfv
//
LOCUS       XP_040944475             885 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein RAD16 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944475
VERSION     XP_040944475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088541.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..885
                     /product="DNA repair protein RAD16 isoform X2"
                     /calculated_mol_wt=99996
     Region          <120..866
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          631..676
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(633,636,648,650,653,656,669,672)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438229"
     CDS             1..885
                     /gene="LOC121214653"
                     /coded_by="XM_041088541.1:240..2897"
                     /db_xref="GeneID:121214653"
ORIGIN      
        1 mqlrsrkrts nfsaneehsd ssdqadnfiq lddlsdsety vpssdsdlge eeildlnhka
       61 vkpapitisd ftepptnrgn geqilseqne sqfdfnvsta kkrnntkrkk karsgqplmw
      121 evweqehekw idenltvdvd ldqqnavite tsdassdlii pllryqkewl awalkqedsn
      181 tkggiladem gmgktiqaia lvlakrqvlh tigepnvssq tagsstdlpr irctlvicpv
      241 vavsqwvsei drftsrgsak vlvyhganrg knvkqfseyd fvittysive aeyrkfmmpp
      301 kekcpycgks fhqkklsvhl kyycgpdaik tenqskqerk kpksmfksgk khasnyeads
      361 rkrgskkkak hnredkdrdf efdetsagke hnlpegksll hsvkweriil deahfvkdrr
      421 cntakavlsl eslykwalsg tplqnrvgel yslvrflqiv pysyylckdc dcrtldysss
      481 tqcpncphns vrhfcwwnky vatpiqhygn geigkramil lkhkilkniv lrrtkkgraa
      541 dlalppriis lrrdamdike tdyyeslyse sqaqfntyvq agtvmnnyah ifdlltrlrq
      601 avdhpylvvy sstaaqragn mvngdrndde qvcgicndpa edpvvtacah vfckaclidf
      661 saslgnvscp scsrlltvdl ttnadggqss kttlkgfkss silnriqlnd fqtstkieal
      721 reeirfmver dgsakgivfs qftsfldlik yslhkssikc vqlvgsmsla ardaaiksft
      781 edpdckiflm slkaggvaln ltvashvflm dpwwnpaver qaqdrihrig qckpirivrf
      841 vientieeri lklqekkelv fegtvggste algklteadm rflfv
//
LOCUS       XP_040944476             884 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair protein RAD16 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944476
VERSION     XP_040944476.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088542.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..884
                     /product="DNA repair protein RAD16 isoform X3"
                     /calculated_mol_wt=99867
     Region          <119..865
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          630..675
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(632,635,647,649,652,655,668,671)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438229"
     CDS             1..884
                     /gene="LOC121214653"
                     /coded_by="XM_041088542.1:155..2809"
                     /db_xref="GeneID:121214653"
ORIGIN      
        1 mqlrsrkrts nfsanehsds sdqadnfiql ddlsdsetyv pssdsdlgee eildlnhkav
       61 kpapitisdf tepptnrgng eqilseqnes qfdfnvstak krnntkrkkk arsgqplmwe
      121 vweqehekwi denltvdvdl dqqnavitet sdassdliip llryqkewla walkqedsnt
      181 kggilademg mgktiqaial vlakrqvlht igepnvssqt agsstdlpri rctlvicpvv
      241 avsqwvseid rftsrgsakv lvyhganrgk nvkqfseydf vittysivea eyrkfmmppk
      301 ekcpycgksf hqkklsvhlk yycgpdaikt enqskqerkk pksmfksgkk hasnyeadsr
      361 krgskkkakh nredkdrdfe fdetsagkeh nlpegksllh svkweriild eahfvkdrrc
      421 ntakavlsle slykwalsgt plqnrvgely slvrflqivp ysyylckdcd crtldyssst
      481 qcpncphnsv rhfcwwnkyv atpiqhygng eigkramill khkilknivl rrtkkgraad
      541 lalppriisl rrdamdiket dyyeslyses qaqfntyvqa gtvmnnyahi fdlltrlrqa
      601 vdhpylvvys staaqragnm vngdrnddeq vcgicndpae dpvvtacahv fckaclidfs
      661 aslgnvscps csrlltvdlt tnadggqssk ttlkgfksss ilnriqlndf qtstkiealr
      721 eeirfmverd gsakgivfsq ftsfldliky slhkssikcv qlvgsmslaa rdaaiksfte
      781 dpdckiflms lkaggvalnl tvashvflmd pwwnpaverq aqdrihrigq ckpirivrfv
      841 ientieeril klqekkelvf egtvggstea lgklteadmr flfv
//
LOCUS       XP_016721095             730 aa            linear   PLN 06-AUG-2024
DEFINITION  protein KINESIN LIGHT CHAIN-RELATED 3 [Gossypium hirsutum].
ACCESSION   XP_016721095
VERSION     XP_016721095.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865606.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721095.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..730
                     /product="protein KINESIN LIGHT CHAIN-RELATED 3"
                     /calculated_mol_wt=79908
     Region          227..253
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <240..297
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          270..296
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(272..273,276..277,279,308,315..316,319..320,
                     322..323,354,357..358,361..362,365)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          273..554
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          306..348
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          353..381
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          395..418
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          431..708
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          435..471
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(436,439..440,443..444,446,478,481..482,485..486,
                     488..489,521,524..525,528..529,532)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          476..506
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          520..548
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          554..589
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          602..632
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          645..673
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..730
                     /gene="LOC107933398"
                     /coded_by="XM_016865606.2:718..2910"
                     /db_xref="GeneID:107933398"
ORIGIN      
        1 mpgvpmdeik eegvmnemkg tsahvkensv skrtpspqsp rgdrmvqvet sieqlyenvc
       61 dmqssdqsps rqsfgsygee sridselhhl aggestevei mkgeeqevdk peddsrsnss
      121 skkgssssgk ksglldkprp tavksissgd vkkvsrpqld seastkpnvk gktppekppi
      181 nkgkvktlkk pntgvlpmkk gkgsklqngt edasesglgn pdlgpfllkq ardlvsagdn
      241 pqkalelalr aaksyelcss gkpnlelvmc lhvtaaiycs lgqyneaipl leqsieipvi
      301 eegqehalak faghmqlgdt yamlgqlens itcystgfev qkrvlgetdp rvgetcryla
      361 eahmqalqfd eaqrlcqmal dihrenctpa sleeaadrrl mglicetkgd heaalehlvl
      421 armtmvansq eaevasvdcs igdaylslsr ydeavfayqk altafkttkg enhpaigsvf
      481 vrladlyyrt gklrestsyc enalriyekp mpgippeeia tgltdvsaiy esmndldqai
      541 kllqkalkiy ndvpgqqstv agieaqmgvm hymlgnyses ynsfssaisk lricrdkksa
      601 ffgialnqmg lacvqryaik eavelfeeak sileqecgpy hpdtlsvysn lagtydaigr
      661 lddaieiley vvqtreeklg tansevddek krlaellkea grvesrkars letlldanph
      721 hnskaegfkv
//
LOCUS       XP_016721103             730 aa            linear   PLN 06-AUG-2024
DEFINITION  protein KINESIN LIGHT CHAIN-RELATED 3 [Gossypium hirsutum].
ACCESSION   XP_016721103
VERSION     XP_016721103.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865614.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016721103.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..730
                     /product="protein KINESIN LIGHT CHAIN-RELATED 3"
                     /calculated_mol_wt=79908
     Region          227..253
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <240..297
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          270..296
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(272..273,276..277,279,308,315..316,319..320,
                     322..323,354,357..358,361..362,365)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          273..554
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          306..348
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          353..381
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          395..418
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          431..708
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          435..471
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(436,439..440,443..444,446,478,481..482,485..486,
                     488..489,521,524..525,528..529,532)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          476..506
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          520..548
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          554..589
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          602..632
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          645..673
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..730
                     /gene="LOC107933398"
                     /coded_by="XM_016865614.2:840..3032"
                     /db_xref="GeneID:107933398"
ORIGIN      
        1 mpgvpmdeik eegvmnemkg tsahvkensv skrtpspqsp rgdrmvqvet sieqlyenvc
       61 dmqssdqsps rqsfgsygee sridselhhl aggestevei mkgeeqevdk peddsrsnss
      121 skkgssssgk ksglldkprp tavksissgd vkkvsrpqld seastkpnvk gktppekppi
      181 nkgkvktlkk pntgvlpmkk gkgsklqngt edasesglgn pdlgpfllkq ardlvsagdn
      241 pqkalelalr aaksyelcss gkpnlelvmc lhvtaaiycs lgqyneaipl leqsieipvi
      301 eegqehalak faghmqlgdt yamlgqlens itcystgfev qkrvlgetdp rvgetcryla
      361 eahmqalqfd eaqrlcqmal dihrenctpa sleeaadrrl mglicetkgd heaalehlvl
      421 armtmvansq eaevasvdcs igdaylslsr ydeavfayqk altafkttkg enhpaigsvf
      481 vrladlyyrt gklrestsyc enalriyekp mpgippeeia tgltdvsaiy esmndldqai
      541 kllqkalkiy ndvpgqqstv agieaqmgvm hymlgnyses ynsfssaisk lricrdkksa
      601 ffgialnqmg lacvqryaik eavelfeeak sileqecgpy hpdtlsvysn lagtydaigr
      661 lddaieiley vvqtreeklg tansevddek krlaellkea grvesrkars letlldanph
      721 hnskaegfkv
//
LOCUS       XP_016721111             240 aa            linear   PLN 06-AUG-2024
DEFINITION  putative exosome complex component rrp40 [Gossypium hirsutum].
ACCESSION   XP_016721111
VERSION     XP_016721111.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865622.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..240
                     /product="putative exosome complex component rrp40"
                     /calculated_mol_wt=25632
     Region          71..156
                     /region_name="S1_Rrp40"
                     /note="Rrp40 S1-like RNA-binding domain. S1-like
                     RNA-binding domains are found in a wide variety of
                     RNA-associated proteins. Rrp4 protein is a subunit of the
                     exosome complex. The exosome plays a central role in 3' to
                     5' RNA processing and degradation in...; cd05790"
                     /db_xref="CDD:240216"
     Site            order(71,95,99..100,122..124)
                     /site_type="other"
                     /note="subunit interface [polypeptide binding]"
                     /db_xref="CDD:240216"
     Site            order(85,93,103,105)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240216"
     Region          158..236
                     /region_name="KH-I_Rrp40"
                     /note="type I K homology (KH) RNA-binding domain found in
                     exosome complex component Rrp40 and similar proteins;
                     cd22526"
                     /db_xref="CDD:411954"
     Site            order(158..160,211)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411954"
     CDS             1..240
                     /gene="LOC107933413"
                     /coded_by="XM_016865622.2:219..941"
                     /db_xref="GeneID:107933413"
ORIGIN      
        1 menkqssspa sfvdstvvpg dvvldlssmt nqtiklgggl rqdcdaisat kagtlrfskp
       61 nkywiessqk ryvpcvedti lgivvdskad nflidikgpa mgflpvlafe ggtrrnipkf
      121 evgtllylrv vkanfgmnpe lsctdasgka aefgplkdgy mfetstgllr kllsspacpv
      181 lealgkklsf eiavglngrv wvnaaspdti vvvanaimns eclsgaqqii mvdhllkniq
//
LOCUS       XP_016721067             346 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine/tyrosine-protein kinase HT1 [Gossypium hirsutum].
ACCESSION   XP_016721067
VERSION     XP_016721067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="serine/threonine/tyrosine-protein kinase HT1"
                     /calculated_mol_wt=39272
     Region          63..310
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,143,182,184,
                     186..187,189,200,203,218..221)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,182,184,186..187,
                     189,200)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(66,141,143,182,184,186,203,218..221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(199..207,217..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..346
                     /gene="LOC107933377"
                     /coded_by="XM_016865578.2:584..1624"
                     /db_xref="GeneID:107933377"
ORIGIN      
        1 mknfywfkqi snnvkserrl slgeykravs wskylvssgg eikgegeews admsqllign
       61 kfasgrhsri yrgiykqrdv aikiisqpee denlanflek qfisevallf hlrhpniitf
      121 vaackkppvf ciiteylagg slrkylhqqe pysvplnlal klaldiargm qylhsqgilh
      181 rdlksenlll gedmcvkvad fgisclesqc gsakgftgty rwmapemike khhtkkvdvy
      241 sfgivlwell taltpfdnmt peqaafavcq kdarpplpss cplafshlin rcwssnpekr
      301 pqfeeivsil esyaesleed peffktykps sgrtilrclp kcitad
//
LOCUS       XP_040944477             346 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine/tyrosine-protein kinase HT1 [Gossypium hirsutum].
ACCESSION   XP_040944477
VERSION     XP_040944477.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088543.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="serine/threonine/tyrosine-protein kinase HT1"
                     /calculated_mol_wt=39272
     Region          63..310
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,143,182,184,
                     186..187,189,200,203,218..221)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,182,184,186..187,
                     189,200)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(66,141,143,182,184,186,203,218..221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(199..207,217..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..346
                     /gene="LOC107933377"
                     /coded_by="XM_041088543.1:3045..4085"
                     /db_xref="GeneID:107933377"
ORIGIN      
        1 mknfywfkqi snnvkserrl slgeykravs wskylvssgg eikgegeews admsqllign
       61 kfasgrhsri yrgiykqrdv aikiisqpee denlanflek qfisevallf hlrhpniitf
      121 vaackkppvf ciiteylagg slrkylhqqe pysvplnlal klaldiargm qylhsqgilh
      181 rdlksenlll gedmcvkvad fgisclesqc gsakgftgty rwmapemike khhtkkvdvy
      241 sfgivlwell taltpfdnmt peqaafavcq kdarpplpss cplafshlin rcwssnpekr
      301 pqfeeivsil esyaesleed peffktykps sgrtilrclp kcitad
//
LOCUS       XP_040944478             346 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine/tyrosine-protein kinase HT1 [Gossypium hirsutum].
ACCESSION   XP_040944478
VERSION     XP_040944478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088544.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="serine/threonine/tyrosine-protein kinase HT1"
                     /calculated_mol_wt=39272
     Region          63..310
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,143,182,184,
                     186..187,189,200,203,218..221)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,182,184,186..187,
                     189,200)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(66,141,143,182,184,186,203,218..221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(199..207,217..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..346
                     /gene="LOC107933377"
                     /coded_by="XM_041088544.1:797..1837"
                     /db_xref="GeneID:107933377"
ORIGIN      
        1 mknfywfkqi snnvkserrl slgeykravs wskylvssgg eikgegeews admsqllign
       61 kfasgrhsri yrgiykqrdv aikiisqpee denlanflek qfisevallf hlrhpniitf
      121 vaackkppvf ciiteylagg slrkylhqqe pysvplnlal klaldiargm qylhsqgilh
      181 rdlksenlll gedmcvkvad fgisclesqc gsakgftgty rwmapemike khhtkkvdvy
      241 sfgivlwell taltpfdnmt peqaafavcq kdarpplpss cplafshlin rcwssnpekr
      301 pqfeeivsil esyaesleed peffktykps sgrtilrclp kcitad
//
LOCUS       XP_016721075             346 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine/tyrosine-protein kinase HT1 [Gossypium hirsutum].
ACCESSION   XP_016721075
VERSION     XP_016721075.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016865586.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="serine/threonine/tyrosine-protein kinase HT1"
                     /calculated_mol_wt=39272
     Region          63..310
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,143,182,184,
                     186..187,189,200,203,218..221)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,182,184,186..187,
                     189,200)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(66,141,143,182,184,186,203,218..221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(199..207,217..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..346
                     /gene="LOC107933377"
                     /coded_by="XM_016865586.2:775..1815"
                     /db_xref="GeneID:107933377"
ORIGIN      
        1 mknfywfkqi snnvkserrl slgeykravs wskylvssgg eikgegeews admsqllign
       61 kfasgrhsri yrgiykqrdv aikiisqpee denlanflek qfisevallf hlrhpniitf
      121 vaackkppvf ciiteylagg slrkylhqqe pysvplnlal klaldiargm qylhsqgilh
      181 rdlksenlll gedmcvkvad fgisclesqc gsakgftgty rwmapemike khhtkkvdvy
      241 sfgivlwell taltpfdnmt peqaafavcq kdarpplpss cplafshlin rcwssnpekr
      301 pqfeeivsil esyaesleed peffktykps sgrtilrclp kcitad
//
LOCUS       XP_040944479             346 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine/tyrosine-protein kinase HT1 [Gossypium hirsutum].
ACCESSION   XP_040944479
VERSION     XP_040944479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088545.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="serine/threonine/tyrosine-protein kinase HT1"
                     /calculated_mol_wt=39272
     Region          63..310
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,143,182,184,
                     186..187,189,200,203,218..221)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(63..66,70,81,83,118,134..137,141,182,184,186..187,
                     189,200)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(66,141,143,182,184,186,203,218..221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(199..207,217..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..346
                     /gene="LOC107933377"
                     /coded_by="XM_041088545.1:682..1722"
                     /db_xref="GeneID:107933377"
ORIGIN      
        1 mknfywfkqi snnvkserrl slgeykravs wskylvssgg eikgegeews admsqllign
       61 kfasgrhsri yrgiykqrdv aikiisqpee denlanflek qfisevallf hlrhpniitf
      121 vaackkppvf ciiteylagg slrkylhqqe pysvplnlal klaldiargm qylhsqgilh
      181 rdlksenlll gedmcvkvad fgisclesqc gsakgftgty rwmapemike khhtkkvdvy
      241 sfgivlwell taltpfdnmt peqaafavcq kdarpplpss cplafshlin rcwssnpekr
      301 pqfeeivsil esyaesleed peffktykps sgrtilrclp kcitad
//
LOCUS       XP_040944480             261 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g16890,
            mitochondrial isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944480
VERSION     XP_040944480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088546.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..261
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g16890, mitochondrial isoform X1"
                     /calculated_mol_wt=29294
     Region          <7..>217
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          8..57
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          12..39
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          43..89
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          45..74
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          117..144
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          150..179
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          185..213
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..261
                     /gene="LOC107933371"
                     /coded_by="XM_041088546.1:1307..2092"
                     /db_xref="GeneID:107933371"
ORIGIN      
        1 msadnckpdr ftynilihgv ckagvideav rlvkqmeifg yspnmctyti lidgycnarr
       61 vddafkliet mkkrnvfpne atvrslihgv frcvaprkaf ellimfleke pmmqrlacdt
      121 lllclsnhhm ateatlfmnk lsgrgympdn ltfnltmtcl ikgfnldetc qildsyierg
      181 lkpgfntyla lmqalysvgk caegdryfdq mikgglsifl tlqcngtsgg lpvhlchtic
      241 srcctyylvg yagsvarkik q
//
LOCUS       XP_040944481             224 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g16890,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944481
VERSION     XP_040944481.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088547.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g16890, mitochondrial isoform X2"
                     /calculated_mol_wt=25062
     Region          <23..52
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          43..72
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          80..107
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          113..142
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          148..176
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..224
                     /gene="LOC107933371"
                     /coded_by="XM_041088547.1:900..1574"
                     /db_xref="GeneID:107933371"
ORIGIN      
        1 mgccevsgvf vttckpqkql swrvddafkl ietmkkrnvf pneatvrsli hgvfrcvapr
       61 kafellimfl ekepmmqrla cdtlllclsn hhmateatlf mnklsgrgym pdnltfnltm
      121 tclikgfnld etcqildsyi erglkpgfnt ylalmqalys vgkcaegdry fdqmikggls
      181 ifltlqcngt sgglpvhlch ticsrcctyy lvgyagsvar kikq
//
LOCUS       XP_040944482             224 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g16890,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944482
VERSION     XP_040944482.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088548.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g16890, mitochondrial isoform X2"
                     /calculated_mol_wt=25062
     Region          <23..52
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          43..72
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          80..107
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          113..142
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          148..176
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..224
                     /gene="LOC107933371"
                     /coded_by="XM_041088548.1:802..1476"
                     /db_xref="GeneID:107933371"
ORIGIN      
        1 mgccevsgvf vttckpqkql swrvddafkl ietmkkrnvf pneatvrsli hgvfrcvapr
       61 kafellimfl ekepmmqrla cdtlllclsn hhmateatlf mnklsgrgym pdnltfnltm
      121 tclikgfnld etcqildsyi erglkpgfnt ylalmqalys vgkcaegdry fdqmikggls
      181 ifltlqcngt sgglpvhlch ticsrcctyy lvgyagsvar kikq
//
LOCUS       XP_040944483             224 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g16890,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944483
VERSION     XP_040944483.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088549.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g16890, mitochondrial isoform X2"
                     /calculated_mol_wt=25062
     Region          <23..52
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          43..72
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          80..107
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          113..142
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          148..176
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..224
                     /gene="LOC107933371"
                     /coded_by="XM_041088549.1:779..1453"
                     /db_xref="GeneID:107933371"
ORIGIN      
        1 mgccevsgvf vttckpqkql swrvddafkl ietmkkrnvf pneatvrsli hgvfrcvapr
       61 kafellimfl ekepmmqrla cdtlllclsn hhmateatlf mnklsgrgym pdnltfnltm
      121 tclikgfnld etcqildsyi erglkpgfnt ylalmqalys vgkcaegdry fdqmikggls
      181 ifltlqcngt sgglpvhlch ticsrcctyy lvgyagsvar kikq
//
LOCUS       XP_040944484             224 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g16890,
            mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944484
VERSION     XP_040944484.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088550.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g16890, mitochondrial isoform X2"
                     /calculated_mol_wt=25062
     Region          <23..52
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          43..72
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          80..107
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          113..142
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          148..176
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..224
                     /gene="LOC107933371"
                     /coded_by="XM_041088550.1:796..1470"
                     /db_xref="GeneID:107933371"
ORIGIN      
        1 mgccevsgvf vttckpqkql swrvddafkl ietmkkrnvf pneatvrsli hgvfrcvapr
       61 kafellimfl ekepmmqrla cdtlllclsn hhmateatlf mnklsgrgym pdnltfnltm
      121 tclikgfnld etcqildsyi erglkpgfnt ylalmqalys vgkcaegdry fdqmikggls
      181 ifltlqcngt sgglpvhlch ticsrcctyy lvgyagsvar kikq
//
LOCUS       XP_016693420             649 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase 1 beta-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016693420
VERSION     XP_016693420.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837931.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..649
                     /product="polygalacturonase 1 beta-like protein 3"
                     /calculated_mol_wt=71253
     Region          436..647
                     /region_name="BURP"
                     /note="BURP domain; cl03923"
                     /db_xref="CDD:470910"
     CDS             1..649
                     /gene="LOC107910159"
                     /coded_by="XM_016837931.2:136..2085"
                     /db_xref="GeneID:107910159"
ORIGIN      
        1 mgekrrpqff lyippnmpls lpqlaasrqq nnmktslffl yllslsyfsv vlvfgtgrse
       61 gkenpftaka slirywnnhi snnlpkppfl iskasplnai dlakltqlan hnslsshies
      121 fcslanlfcs fqedssklda vvkgkgdanf avyssknfkg ygslrrggid sfknysdgln
      181 tpnesfkkys rgsnahsedf tsyakdanva idnftnygss ttggsggfnn yqervnvpnl
      241 rftsydsdgn khklsfssys setnsgseaf tnygkkgkav paeftsyssn antigssfag
      301 ygvlgnsand sfkaygdsgn nprnnfkiyg lasnlgidsf tsyrdsanvg adsfqsyard
      361 ansgkvnfvn ygktfnvgns tfkeygkgst gsttigfkmy dlarsfldya kkgvtfagyt
      421 nsssketsvn rwvepgkffr esvlkqgnvm vmpdirdkmp rrsflprgil sklpfstshl
      481 selrnifgas megmlenalt ecerpasrge tkrcvgsved midfatsvlg hsvtvrtten
      541 vkgskqeimi gevkgingge vtksvschqs lypyllyych svpkvrvyea eildvtsksk
      601 inhgvaichl dtsawspthg aflalrsspg qievchwife ndmtwtivd
//
LOCUS       XP_016693421             186 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693421
VERSION     XP_016693421.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837932.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693421.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="kinesin-like protein KIN-12E isoform X1"
                     /calculated_mol_wt=20392
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>98
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..186
                     /gene="LOC107910160"
                     /coded_by="XM_016837932.2:425..985"
                     /db_xref="GeneID:107910160"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqrakfikn navvnedasg
       61 dviamrlqiq qlkkevshlr afvngksenl dndnlassip vspgpfkwef ppgsfsplss
      121 dkrmsqkkdy eialvgafkr erekeaplqa ltaenqvamq lmvwgrlsge pqrvllttnv
      181 gimllv
//
LOCUS       XP_016693422             181 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693422
VERSION     XP_016693422.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837933.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693422.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="kinesin-like protein KIN-12E isoform X2"
                     /calculated_mol_wt=19850
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>98
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..181
                     /gene="LOC107910160"
                     /coded_by="XM_016837933.2:377..922"
                     /db_xref="GeneID:107910160"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqrakfikn navvnedasg
       61 dviamrlqiq qlkkevshlr afvngksenl dndnlassip vspgpfkwef ppgsfsplss
      121 dkrmsqkkdy eialvgafkr erekeaplqa ltaenqmvwg rlsgepqrvl lttnvgimll
      181 v
//
LOCUS       XP_040944485             180 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944485
VERSION     XP_040944485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088551.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..180
                     /product="kinesin-like protein KIN-12E isoform X3"
                     /calculated_mol_wt=19593
     Region          4..>29
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Region          <28..>98
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..180
                     /gene="LOC107910160"
                     /coded_by="XM_041088551.1:377..919"
                     /db_xref="GeneID:107910160"
ORIGIN      
        1 mekgnrqvvv salqfactdd vptnlataes csletlstlk faqrakfikn navvnedasg
       61 dviamrlqiq qlkkevshlr afvngksenl dndnlassip vspgpfkwef ppgsfsplss
      121 dkrmsqkkdy eialvgafkr erekeaplqa ltaenqvamq lsvvffalyg dgaanqravv
//
LOCUS       XP_016693423             379 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SIS3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693423
VERSION     XP_016693423.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837934.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..379
                     /product="E3 ubiquitin-protein ligase SIS3 isoform X1"
                     /calculated_mol_wt=42430
     Region          234..279
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(235,238,253,255,258,261,272,275)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438480"
     CDS             1..379
                     /gene="LOC107910161"
                     /coded_by="XM_016837934.2:329..1468"
                     /db_xref="GeneID:107910161"
ORIGIN      
        1 mairgvdfkw ydgfflsmla tsviivainw kryhhctypl hiwivvdyst vfifrllmfv
       61 dnglaagmgl dfgwqqryar fcgrivvlsi lsmllypflw awtvigtlwf tsarnclpke
      121 gqkygfliwl lfsycgllci acmsvgkwmt rrqahllraq qgipiseygv lvdmirvpdw
      181 afeaagqemr gmgqdtapyh pglyltpaqr eavealiqel pkfrlkavpt dcsecpicle
      241 efhvgnevrg lpcahnfhve cidqwlrlnv kcprcrcsvf pnldlsalsn lrsadserss
      301 asivtttqyv rtqplsqsyl lrlqgllrpv rtgnagapsd advaldtaen gafnvatqds
      361 tgreavghal gglstpphh
//
LOCUS       XP_016693424             362 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SIS3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693424
VERSION     XP_016693424.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837935.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..362
                     /product="E3 ubiquitin-protein ligase SIS3 isoform X2"
                     /calculated_mol_wt=40396
     Region          217..262
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(218,221,236,238,241,244,255,258)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438480"
     CDS             1..362
                     /gene="LOC107910161"
                     /coded_by="XM_016837935.2:175..1263"
                     /db_xref="GeneID:107910161"
ORIGIN      
        1 mlatsviiva inwkryhhct yplhiwivvd ystvfifrll mfvdnglaag mgldfgwqqr
       61 yarfcgrivv lsilsmllyp flwawtvigt lwftsarncl pkegqkygfl iwllfsycgl
      121 lciacmsvgk wmtrrqahll raqqgipise ygvlvdmirv pdwafeaagq emrgmgqdta
      181 pyhpglyltp aqreaveali qelpkfrlka vptdcsecpi cleefhvgne vrglpcahnf
      241 hvecidqwlr lnvkcprcrc svfpnldlsa lsnlrsadse rssasivttt qyvrtqplsq
      301 syllrlqgll rpvrtgnaga psdadvaldt aengafnvat qdstgreavg halgglstpp
      361 hh
//
LOCUS       XP_016693425             322 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase SIS3 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693425
VERSION     XP_016693425.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837936.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..322
                     /product="E3 ubiquitin-protein ligase SIS3 isoform X3"
                     /calculated_mol_wt=35580
     Region          177..222
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(178,181,196,198,201,204,215,218)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..322
                     /gene="LOC107910161"
                     /coded_by="XM_016837936.2:493..1461"
                     /db_xref="GeneID:107910161"
ORIGIN      
        1 mfvdnglaag mgldfgwqqr yarfcgrivv lsilsmllyp flwawtvigt lwftsarncl
       61 pkegqkygfl iwllfsycgl lciacmsvgk wmtrrqahll raqqgipise ygvlvdmirv
      121 pdwafeaagq emrgmgqdta pyhpglyltp aqreaveali qelpkfrlka vptdcsecpi
      181 cleefhvgne vrglpcahnf hvecidqwlr lnvkcprcrc svfpnldlsa lsnlrsadse
      241 rssasivttt qyvrtqplsq syllrlqgll rpvrtgnaga psdadvaldt aengafnvat
      301 qdstgreavg halgglstpp hh
//
LOCUS       XP_040944486              77 aa            linear   PLN 06-AUG-2024
DEFINITION  kinesin-like protein KIN-12E [Gossypium hirsutum].
ACCESSION   XP_040944486
VERSION     XP_040944486.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088552.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..77
                     /product="kinesin-like protein KIN-12E"
                     /calculated_mol_wt=8317
     Region          <6..>57
                     /region_name="PLN03188"
                     /note="kinesin-12 family protein; Provisional"
                     /db_xref="CDD:215621"
     CDS             1..77
                     /gene="LOC107910744"
                     /coded_by="XM_041088552.1:389..622"
                     /db_xref="GeneID:107910744"
ORIGIN      
        1 mekgnscsle tlstlkfaqr akfiknnavv nedasgdvva mrlqiqqlke evshlrafvn
       61 gksenldnei gtcccta
//
LOCUS       XP_016668554             954 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g06840 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016668554
VERSION     XP_016668554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813065.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..954
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g06840 isoform X1"
                     /calculated_mol_wt=105635
     Region          30..896
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          81..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          250..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..370
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          632..896
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(632..636,640,652,654,683,699..702,706,708,750,752,
                     754..755,757,768,771,794..797)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(632..636,640,652,654,683,699..702,706,750,752,
                     754..755,757,768)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(636,706,708,750,752,754,771,794..797)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(767..774,790..797)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..954
                     /gene="LOC107888831"
                     /coded_by="XM_016813065.2:203..3067"
                     /db_xref="GeneID:107888831"
ORIGIN      
        1 miwrgcilal sfccccllll aapapapith psevsallav kkqlvdpknn lrnwdkgdpc
       61 tsnwtgilcf hnlgkdgylh vqelqllnmn lsgtlapelg qlshlkildf mwneltgsip
      121 keighistlr llllngnkly gslpdelgyl snlsrlqldq nnisgqipkt fanmssvrhl
      181 hlnnnslagq ippelsqift llhllldnnn lsgylppefs nlpnlrilql dnndfsgsvi
      241 pasyrnfsrl vklslrncsl qgavpdlsri pslsyldlsr nhlagpipen klsenmttid
      301 lsdnqlkgsi pgsfsdlhsl qklslknnfl tgpvptniwq nmsfstsarl kldlrnnsfs
      361 siqghlnppv nvtlrlegnp vcknanllnv nlfcgsepre dkmltnlnys tancpiqacp
      421 tdnfyeyvpa splpcfcaap lrigyrlksp sfsyfppyiq plevyltssl klsryqlsid
      481 tyswekgprl rmylklfpsl nvnhsstfnv sevqrirhiy tswtfpgsal fgpyellnft
      541 llgpyadmkf enenqgiskg ilvavavggv acavamsvii tilitrryag nhhamsrkrl
      601 stkvsmrlgg vkyftfkema latdnfnsss qvgqggygkv ykgtlpdktv vaikraeegs
      661 lqgqkeffte ikllsrlhhr nlvslvgycd eegeqmlvye flpngtlrdw lsakskrsln
      721 fgmrlrialg sakgilylht eahppvfhrd ikasnillds klnakvadfg lsrlapaled
      781 egavpdhvst vvrgtpgyld peyflthklt drsdvyslgv vflemltgmr pishdrnivr
      841 evntahqsgl mmsiidgrmg cypsecierf aglalsccdn kpekrpsmld vvkqlefilt
      901 mmpetesvss dlvswypnsg kllssasssa syvstlnvsg sdlisgvips ikpr
//
LOCUS       XP_040944487             933 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g06840 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944487
VERSION     XP_040944487.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088553.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..933
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g06840 isoform X2"
                     /calculated_mol_wt=103363
     Region          30..875
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          81..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          250..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          320..370
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..875
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(611..615,619,631,633,662,678..681,685,687,729,731,
                     733..734,736,747,750,773..776)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(611..615,619,631,633,662,678..681,685,729,731,
                     733..734,736,747)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(615,685,687,729,731,733,750,773..776)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(746..753,769..776)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..933
                     /gene="LOC107888831"
                     /coded_by="XM_041088553.1:204..3005"
                     /db_xref="GeneID:107888831"
ORIGIN      
        1 miwrgcilal sfccccllll aapapapith psevsallav kkqlvdpknn lrnwdkgdpc
       61 tsnwtgilcf hnlgkdgylh vqelqllnmn lsgtlapelg qlshlkildf mwneltgsip
      121 keighistlr llllngnkly gslpdelgyl snlsrlqldq nnisgqipkt fanmssvrhl
      181 hlnnnslagq ippelsqift llhllldnnn lsgylppefs nlpnlrilql dnndfsgsvi
      241 pasyrnfsrl vklslrncsl qgavpdlsri pslsyldlsr nhlagpipen klsenmttid
      301 lsdnqlkgsi pgsfsdlhsl qklslknnfl tgpvptniwq nmsfstsarl kldlrnnsfs
      361 siqghlnppv nvtlrlegnp vcknanllnv nlfcgsepre dkmltnlnys tancpiqacp
      421 tdnfyeyvpa splpcfcaap lrigyrlksp sfsyfppyiq plevyltssl klsryqlsid
      481 tyswekgprl rmylklfpsl nvnhsstfnv sevqrirhiy tswtfpvkfe nenqgiskgi
      541 lvavavggva cavamsviit ilitrryagn hhamsrkrls tkvsmrlggv kyftfkemal
      601 atdnfnsssq vgqggygkvy kgtlpdktvv aikraeegsl qgqkefftei kllsrlhhrn
      661 lvslvgycde egeqmlvyef lpngtlrdwl sakskrslnf gmrlrialgs akgilylhte
      721 ahppvfhrdi kasnilldsk lnakvadfgl srlapalede gavpdhvstv vrgtpgyldp
      781 eyflthkltd rsdvyslgvv flemltgmrp ishdrnivre vntahqsglm msiidgrmgc
      841 ypsecierfa glalsccdnk pekrpsmldv vkqlefiltm mpetesvssd lvswypnsgk
      901 llssasssas yvstlnvsgs dlisgvipsi kpr
//
LOCUS       XP_016694071             516 aa            linear   PLN 06-AUG-2024
DEFINITION  U3 snoRNP-associated protein-like EMB2271 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694071
VERSION     XP_016694071.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838582.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..516
                     /product="U3 snoRNP-associated protein-like EMB2271
                     isoform X1"
                     /calculated_mol_wt=57498
     Region          <144..488
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          164..220
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..262
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          267..303
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          349..420
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          428..466
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..498
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..516
                     /gene="LOC107910646"
                     /coded_by="XM_016838582.2:154..1704"
                     /db_xref="GeneID:107910646"
ORIGIN      
        1 mksknekkrg tsatkgglke kkfslkndpf feteskkrrk mdyeddnies ggseeeaeil
       61 gasdgngged edeneieetp geirkrvate llgkmraiar kekegrdgde eveeeeards
      121 lvakilqqeq leesgrikrv vasrlkkpet adgfrvmvkh rhtvtavals dddlkgfsas
      181 kdgtilqwdv esgkteryqw psedilkshg akdprgrlkk hsksvlalav ssdgrylasg
      241 gldrhvhlwd irtrehlqaf sghqkpvscl sfrqgttdlf sgsfdrtiky wnmedqayid
      301 ticghesevl tldclrkerv ltigrdrcmm lfkvldqsrl vfrppptsle cccfinndef
      361 lsgsddgsiq lwnvlrkkpv yivknahall pagqnveqkg seiipdncle ngdhkiegyn
      421 fsstyswvss isvcqgsdla asgagngcvr lwaietgrkd iqplydvplm gfvnslafak
      481 sgqflvagvg qeprlgrwgr lptarngvai qplkll
//
LOCUS       XP_016694072             506 aa            linear   PLN 06-AUG-2024
DEFINITION  U3 snoRNP-associated protein-like EMB2271 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694072
VERSION     XP_016694072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838583.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..506
                     /product="U3 snoRNP-associated protein-like EMB2271
                     isoform X2"
                     /calculated_mol_wt=56456
     Region          <144..478
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          164..220
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..262
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          267..303
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          349..410
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          418..456
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          463..488
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..506
                     /gene="LOC107910646"
                     /coded_by="XM_016838583.2:111..1631"
                     /db_xref="GeneID:107910646"
ORIGIN      
        1 mksknekkrg tsatkgglke kkfslkndpf feteskkrrk mdyeddnies ggseeeaeil
       61 gasdgngged edeneieetp geirkrvate llgkmraiar kekegrdgde eveeeeards
      121 lvakilqqeq leesgrikrv vasrlkkpet adgfrvmvkh rhtvtavals dddlkgfsas
      181 kdgtilqwdv esgkteryqw psedilkshg akdprgrlkk hsksvlalav ssdgrylasg
      241 gldrhvhlwd irtrehlqaf sghqkpvscl sfrqgttdlf sgsfdrtiky wnmedqayid
      301 ticghesevl tldclrkerv ltigrdrcmm lfkvldqsrl vfrppptsle cccfinndef
      361 lsgsddgsiq lwnvlrkkpv yivknahall pagqnveqke ngdhkiegyn fsstyswvss
      421 isvcqgsdla asgagngcvr lwaietgrkd iqplydvplm gfvnslafak sgqflvagvg
      481 qeprlgrwgr lptarngvai qplkll
//
LOCUS       XP_016693999              92 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 13 [Gossypium hirsutum].
ACCESSION   XP_016693999
VERSION     XP_016693999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..92
                     /product="plant UBX domain-containing protein 13"
                     /calculated_mol_wt=10096
     Region          <2..17
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     CDS             1..92
                     /gene="LOC107910606"
                     /coded_by="XM_016838510.2:453..731"
                     /db_xref="GeneID:107910606"
ORIGIN      
        1 mleehagnln tavtayfseg drptstivpv ddamdvddpn evvpnrpvfp flplsrtneq
       61 sslhdrnfhs sffdgdsgst hepmvthpte vr
//
LOCUS       XP_016694159             351 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694159
VERSION     XP_016694159.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838670.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..351
                     /product="thaumatin-like protein 1 isoform X1"
                     /calculated_mol_wt=37434
     Region          62..279
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..351
                     /gene="LOC107910709"
                     /coded_by="XM_016838670.2:14..1069"
                     /db_xref="GeneID:107910709"
ORIGIN      
        1 mnsvspnptp qieeisscwv laihhtfhff fptfmaqptl iaaicvltls hvvqattfti
       61 vnkcdyvvcp gilsnagvpt lattgftlqr getktitapt swggrfwgrt hcshdsdgkf
      121 scltgdcgsg klecsgngaa ppatlaeftl dgaggldffd vslvdgynip mlgvpqggkg
      181 qncsstgcvv dlnglcpsel rimssngrdg iacksaceaf rqpqyccsga yatpdtckps
      241 sysqvfktac praysyaydd ktstftcana adysitfcps pntsqkssqe attpgqntet
      301 tttamptspl vdntimyegl ildeseaspf rvttyifgii tvaiwwwcqi f
//
LOCUS       XP_016694160             340 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694160
VERSION     XP_016694160.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838671.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="thaumatin-like protein 1 isoform X2"
                     /calculated_mol_wt=35625
     Region          62..279
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..340
                     /gene="LOC107910709"
                     /coded_by="XM_016838671.2:16..1038"
                     /db_xref="GeneID:107910709"
ORIGIN      
        1 mnsvspnptp qieeisscwv laihhtfhff fptfmaqptl iaaicvltls hvvqattfti
       61 vnkcdyvvcp gilsnagvpt lattgftlqr getktitapt swggrfwgrt hcshdsdgkf
      121 scltgdcgsg klecsgngaa ppatlaeftl dgaggldffd vslvdgynip mlgvpqggkg
      181 qncsstgcvv dlnglcpsel rimssngrdg iacksaceaf rqpqyccsga yatpdtckps
      241 sysqvfktac praysyaydd ktstftcana adysitfcps pntsqkssqe attpgqntet
      301 tttamptspl vdntimsgvg cagshgdmes shdiesspvn
//
LOCUS       XP_040944488             287 aa            linear   PLN 06-AUG-2024
DEFINITION  thaumatin-like protein 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944488
VERSION     XP_040944488.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088554.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..287
                     /product="thaumatin-like protein 1 isoform X3"
                     /calculated_mol_wt=30244
     Region          62..279
                     /region_name="Thaumatin"
                     /note="Thaumatin family; pfam00314"
                     /db_xref="CDD:459757"
     CDS             1..287
                     /gene="LOC107910709"
                     /coded_by="XM_041088554.1:17..880"
                     /db_xref="GeneID:107910709"
ORIGIN      
        1 mnsvspnptp qieeisscwv laihhtfhff fptfmaqptl iaaicvltls hvvqattfti
       61 vnkcdyvvcp gilsnagvpt lattgftlqr getktitapt swggrfwgrt hcshdsdgkf
      121 scltgdcgsg klecsgngaa ppatlaeftl dgaggldffd vslvdgynip mlgvpqggkg
      181 qncsstgcvv dlnglcpsel rimssngrdg iacksaceaf rqpqyccsga yatpdtckps
      241 sysqvfktac praysyaydd ktstftcana adysitfcps pntrala
//
LOCUS       XP_016694166             227 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694166
VERSION     XP_016694166.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838677.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25763
     Region          <15..82
                     /region_name="RNAP_Rpb7_N_like"
                     /note="This conserved domain represents the N-terminal
                     ribonucleoprotein (RNP) domain of the Rpb7 subunit of
                     eukaryotic RNA polymerase (RNAP) II and its homologs,
                     Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III,
                     and RpoE (subunit E) of archaeal RNAP; cl04309"
                     /db_xref="CDD:446344"
     CDS             1..227
                     /gene="LOC107910711"
                     /coded_by="XM_016838677.2:146..829"
                     /db_xref="GeneID:107910711"
ORIGIN      
        1 meglsvadan lvmylhpsks rnvsqsilre lgsllfkfne tfdgvllayd vnildkqaki
       61 lsgvhpyfgl rlkanlllfs pkpdmllegk vvklsqesih vivlgfssai itaenirgef
      121 kyrtkdteel faskshkrhv ikvgtmirfl vksfdeeilh iigslisaht gsirwldrhl
      181 eedsefdrss mksrdrewlg dktvdegatp msydnhikms kkrrite
//
LOCUS       XP_040944489             227 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944489
VERSION     XP_040944489.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088555.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25763
     Region          <15..82
                     /region_name="RNAP_Rpb7_N_like"
                     /note="This conserved domain represents the N-terminal
                     ribonucleoprotein (RNP) domain of the Rpb7 subunit of
                     eukaryotic RNA polymerase (RNAP) II and its homologs,
                     Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III,
                     and RpoE (subunit E) of archaeal RNAP; cl04309"
                     /db_xref="CDD:446344"
     CDS             1..227
                     /gene="LOC107910711"
                     /coded_by="XM_041088555.1:133..816"
                     /db_xref="GeneID:107910711"
ORIGIN      
        1 meglsvadan lvmylhpsks rnvsqsilre lgsllfkfne tfdgvllayd vnildkqaki
       61 lsgvhpyfgl rlkanlllfs pkpdmllegk vvklsqesih vivlgfssai itaenirgef
      121 kyrtkdteel faskshkrhv ikvgtmirfl vksfdeeilh iigslisaht gsirwldrhl
      181 eedsefdrss mksrdrewlg dktvdegatp msydnhikms kkrrite
//
LOCUS       XP_016694164             227 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694164
VERSION     XP_016694164.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838675.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25763
     Region          <15..82
                     /region_name="RNAP_Rpb7_N_like"
                     /note="This conserved domain represents the N-terminal
                     ribonucleoprotein (RNP) domain of the Rpb7 subunit of
                     eukaryotic RNA polymerase (RNAP) II and its homologs,
                     Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III,
                     and RpoE (subunit E) of archaeal RNAP; cl04309"
                     /db_xref="CDD:446344"
     CDS             1..227
                     /gene="LOC107910711"
                     /coded_by="XM_016838675.2:139..822"
                     /db_xref="GeneID:107910711"
ORIGIN      
        1 meglsvadan lvmylhpsks rnvsqsilre lgsllfkfne tfdgvllayd vnildkqaki
       61 lsgvhpyfgl rlkanlllfs pkpdmllegk vvklsqesih vivlgfssai itaenirgef
      121 kyrtkdteel faskshkrhv ikvgtmirfl vksfdeeilh iigslisaht gsirwldrhl
      181 eedsefdrss mksrdrewlg dktvdegatp msydnhikms kkrrite
//
LOCUS       XP_040944490             227 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944490
VERSION     XP_040944490.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088556.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=25763
     Region          <15..82
                     /region_name="RNAP_Rpb7_N_like"
                     /note="This conserved domain represents the N-terminal
                     ribonucleoprotein (RNP) domain of the Rpb7 subunit of
                     eukaryotic RNA polymerase (RNAP) II and its homologs,
                     Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III,
                     and RpoE (subunit E) of archaeal RNAP; cl04309"
                     /db_xref="CDD:446344"
     CDS             1..227
                     /gene="LOC107910711"
                     /coded_by="XM_041088556.1:122..805"
                     /db_xref="GeneID:107910711"
ORIGIN      
        1 meglsvadan lvmylhpsks rnvsqsilre lgsllfkfne tfdgvllayd vnildkqaki
       61 lsgvhpyfgl rlkanlllfs pkpdmllegk vvklsqesih vivlgfssai itaenirgef
      121 kyrtkdteel faskshkrhv ikvgtmirfl vksfdeeilh iigslisaht gsirwldrhl
      181 eedsefdrss mksrdrewlg dktvdegatp msydnhikms kkrrite
//
LOCUS       XP_040944491             153 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944491
VERSION     XP_040944491.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088557.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..153
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=17145
     Region          <15..82
                     /region_name="RNAP_Rpb7_N_like"
                     /note="This conserved domain represents the N-terminal
                     ribonucleoprotein (RNP) domain of the Rpb7 subunit of
                     eukaryotic RNA polymerase (RNAP) II and its homologs,
                     Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III,
                     and RpoE (subunit E) of archaeal RNAP; cl04309"
                     /db_xref="CDD:446344"
     CDS             1..153
                     /gene="LOC107910711"
                     /coded_by="XM_041088557.1:140..601"
                     /db_xref="GeneID:107910711"
ORIGIN      
        1 meglsvadan lvmylhpsks rnvsqsilre lgsllfkfne tfdgvllayd vnildkqaki
       61 lsgvhpyfgl rlkanlllfs pkpdmllegk vvklsqesih vivlgfssai itaenirgef
      121 kyrtkdteel faskshkrhv ikvgtmirfl vkr
//
LOCUS       XP_016694153             195 aa            linear   PLN 06-AUG-2024
DEFINITION  rac-like GTP-binding protein 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694153
VERSION     XP_016694153.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838664.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="rac-like GTP-binding protein 5 isoform X1"
                     /calculated_mol_wt=21095
     Region          6..178
                     /region_name="Rop_like"
                     /note="Rho-related protein from plants (Rop)-like;
                     cd04133"
                     /db_xref="CDD:206705"
     Site            order(8,38..39,41..42,44,46,55,59..60,62..64,70,73)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206705"
     Site            13..20
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206705"
     Site            order(16..21,60..61,63,119,121,160..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206705"
     Site            37..43
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206705"
     Site            38
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206705"
     Site            order(39,62,70,72)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206705"
     Site            order(39..40,64,70)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206705"
     Site            order(40..41,70,73)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206705"
     Site            60..63
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206705"
     Site            order(63..64,70..73,78..80)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206705"
     Site            118..121
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206705"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206705"
     CDS             1..195
                     /gene="LOC107910702"
                     /coded_by="XM_016838664.2:328..915"
                     /db_xref="GeneID:107910702"
ORIGIN      
        1 msasrfikcv tvgdgavgkt cllisytsnt fptdyvptvf dnfsanvvvd gstvnlglwd
       61 tagqedynrl rplsyrgadv filafslisk asyenvtkkw ipelnhyapg vpivlvgtkl
      121 dlrddsqyla dhpsalpist aqgeelkkqi esssyiecsa kslqnvkavf daaikvvlqp
      181 pkknkkkksg gcsil
//
LOCUS       XP_016694154             173 aa            linear   PLN 06-AUG-2024
DEFINITION  rac-like GTP-binding protein 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694154
VERSION     XP_016694154.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838665.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="rac-like GTP-binding protein 5 isoform X2"
                     /calculated_mol_wt=18655
     Region          6..156
                     /region_name="Rop_like"
                     /note="Rho-related protein from plants (Rop)-like;
                     cd04133"
                     /db_xref="CDD:206705"
     Site            order(8,38..39,41..42,44,46,55,59..60,62..64,70,73)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206705"
     Site            13..20
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206705"
     Site            order(16..21,60..61,63,119,121)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206705"
     Site            37..43
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206705"
     Site            38
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206705"
     Site            order(39,62,70,72)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206705"
     Site            order(39..40,64,70)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206705"
     Site            order(40..41,70,73)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206705"
     Site            60..63
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206705"
     Site            order(63..64,70..73,78..80)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206705"
     Site            118..121
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206705"
     CDS             1..173
                     /gene="LOC107910702"
                     /coded_by="XM_016838665.2:313..834"
                     /db_xref="GeneID:107910702"
ORIGIN      
        1 msasrfikcv tvgdgavgkt cllisytsnt fptdyvptvf dnfsanvvvd gstvnlglwd
       61 tagqedynrl rplsyrgadv filafslisk asyenvtkkw ipelnhyapg vpivlvgtkl
      121 dlrddsqyla dhpsalpist aqnvkavfda aikvvlqppk knkkkksggc sil
//
LOCUS       XP_016694210             190 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DCL homolog, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016694210
VERSION     XP_016694210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838721.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..190
                     /product="protein DCL homolog, chloroplastic"
                     /calculated_mol_wt=21131
     Region          114..190
                     /region_name="DUF3223"
                     /note="Protein of unknown function (DUF3223); pfam11523"
                     /db_xref="CDD:431917"
     CDS             1..190
                     /gene="LOC107910745"
                     /coded_by="XM_016838721.2:93..665"
                     /db_xref="GeneID:107910745"
ORIGIN      
        1 masclkpsps nfhrtfipis fssssvilss plyqttslrv rfcalttgpd vgrttsqess
       61 gadllrkpsi vpdedsggls eeedgskekg nkgewidwed rilqdtvplv gfvrmilhsg
      121 kyesgdrlsp ehektilerl lpyhpesekk igcgidyitv gyhpefvgsr clfivrkdge
      181 lvdfsywkci
//
LOCUS       XP_016691072             537 aa            linear   PLN 06-AUG-2024
DEFINITION  signal peptide peptidase-like 3 [Gossypium hirsutum].
ACCESSION   XP_016691072
VERSION     XP_016691072.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835583.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691072.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..537
                     /product="signal peptide peptidase-like 3"
                     /calculated_mol_wt=58439
     Region          48..185
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            144..146
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:238300"
     Region          246..526
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..537
                     /gene="LOC107908422"
                     /coded_by="XM_016835583.2:135..1748"
                     /db_xref="GeneID:107908422"
ORIGIN      
        1 msfppgirrr fvvsfpllll vtlsfavvat adgasqddgp elpacnnpfk lvkvkiwvdg
       61 vegedlsgit asfgaslpee ankssklptv fsnplngcsn ssskltgsva lsirgdcdfv
      121 tkakvaqsgg asallvindn eelykmvcse ndtslnisip vvmipksagd ainksmeekh
      181 vefllyaptr pivdfsvifl wamavgtivt aslwqefgts ensderynel skespnagtg
      241 ddddkeildi svkgaivfvi tastflvlly ffmsawfvwl livlfciggv qgmhtcimtp
      301 iarkcrncpq ktlnlplfge vsivsfvval cclifavvwa vnrresyswv gqdilgiclm
      361 itvlqlarlp nikvatvllc cafvydifwv flsplifhks vmivvargdn sggesipmll
      421 rvprafdpwg gydmigfgdi lfpgllvafa frydkaykkh lasgyflwli igygvgllft
      481 ylglylmngh gqpallylvp ctlgvtvilg lvrgelkelw nyspesssat tnltgea
//
LOCUS       XP_016691103             279 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl 4-hydroxylase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016691103
VERSION     XP_016691103.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835614.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691103.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..279
                     /product="prolyl 4-hydroxylase 1 isoform X1"
                     /calculated_mol_wt=31182
     Region          84..>270
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..279
                     /gene="LOC107908443"
                     /coded_by="XM_016835614.2:82..921"
                     /db_xref="GeneID:107908443"
ORIGIN      
        1 mapamkivlg lltfvtvgmi igalfqlafi rrledsygny hfpttklhtr qsdgnlrlpi
       61 glshwrgdqe aeilrlgyvk peiiswspri ivlhnflsne ecdylkaial prlqvstvvd
      121 aktgmgiksk vrtssgmflr pnerkypmiq aiekrisvfs qipaehgeqi qvlryekdqf
      181 ykphhdyfsd pfnikrsqri atmlmylsdd veggetyfpr agtgdcscgg kvvkgmsikp
      241 ikgdavlfws mgldgqsdpn slhggcavcq vrngqqqng
//
LOCUS       XP_040944492             257 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl 4-hydroxylase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944492
VERSION     XP_040944492.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088558.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..257
                     /product="prolyl 4-hydroxylase 1 isoform X2"
                     /calculated_mol_wt=28608
     Region          <79..>248
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..257
                     /gene="LOC107908443"
                     /coded_by="XM_041088558.1:82..855"
                     /db_xref="GeneID:107908443"
ORIGIN      
        1 mapamkivlg lltfvtvgmi igalfqlafi rrledsygny hfpttklhtr qsdgnlrlpi
       61 glshwrgdqe aeilrlgyec dylkaialpr lqvstvvdak tgmgikskvr tssgmflrpn
      121 erkypmiqai ekrisvfsqi paehgeqiqv lryekdqfyk phhdyfsdpf nikrsqriat
      181 mlmylsddve ggetyfprag tgdcscggkv vkgmsikpik gdavlfwsmg ldgqsdpnsl
      241 hggcavcqvr ngqqqng
//
LOCUS       XP_040944493             234 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl 4-hydroxylase 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944493
VERSION     XP_040944493.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088559.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="prolyl 4-hydroxylase 1 isoform X3"
                     /calculated_mol_wt=26643
     Region          84..>221
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..234
                     /gene="LOC107908443"
                     /coded_by="XM_041088559.1:82..786"
                     /db_xref="GeneID:107908443"
ORIGIN      
        1 mapamkivlg lltfvtvgmi igalfqlafi rrledsygny hfpttklhtr qsdgnlrlpi
       61 glshwrgdqe aeilrlgyvk peiiswspri ivlhnflsne ecdylkaial prlqvstvvd
      121 aktgmgiksk vrtssgmflr pnerkypmiq aiekrisvfs qipaehgeqi qvlryekdqf
      181 ykphhdyfsd pfnikrsqri atmlmylsdd veggetyfpr aivavvgrll kgcq
//
LOCUS       XP_040944494             286 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl 4-hydroxylase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944494
VERSION     XP_040944494.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088560.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..286
                     /product="prolyl 4-hydroxylase 1 isoform X1"
                     /calculated_mol_wt=32084
     Region          84..281
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..286
                     /gene="LOC121214658"
                     /coded_by="XM_041088560.1:81..941"
                     /db_xref="GeneID:121214658"
ORIGIN      
        1 mapamkivlg lltfvtvgmi igalfqlafi rrledsygny hfpttklhtr qsdgnlrlpi
       61 glshwrgdqe aeilrlgyvk peiiswspri ivlhnflsne ecdylkaial prlqvstvvd
      121 aktgmgiksk vrtssgmflr pnerkypmiq aiekrisvfs qipaehgeqi qvlryekdqf
      181 ykphhdyfsd pfnikrsqri atmlmylsdd veggetyfpr agtgdcscgg kvvkgmsikp
      241 ikgdavlfws mgldgqsdpn slhggcavls gekwsatkwm rkkpis
//
LOCUS       XP_040944495             264 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl 4-hydroxylase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944495
VERSION     XP_040944495.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088561.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..264
                     /product="prolyl 4-hydroxylase 1 isoform X2"
                     /calculated_mol_wt=29510
     Region          <79..259
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..264
                     /gene="LOC121214658"
                     /coded_by="XM_041088561.1:63..857"
                     /db_xref="GeneID:121214658"
ORIGIN      
        1 mapamkivlg lltfvtvgmi igalfqlafi rrledsygny hfpttklhtr qsdgnlrlpi
       61 glshwrgdqe aeilrlgyec dylkaialpr lqvstvvdak tgmgikskvr tssgmflrpn
      121 erkypmiqai ekrisvfsqi paehgeqiqv lryekdqfyk phhdyfsdpf nikrsqriat
      181 mlmylsddve ggetyfprag tgdcscggkv vkgmsikpik gdavlfwsmg ldgqsdpnsl
      241 hggcavlsge kwsatkwmrk kpis
//
LOCUS       XP_040944496             234 aa            linear   PLN 06-AUG-2024
DEFINITION  prolyl 4-hydroxylase 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944496
VERSION     XP_040944496.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088562.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="prolyl 4-hydroxylase 1 isoform X3"
                     /calculated_mol_wt=26643
     Region          84..>221
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..234
                     /gene="LOC121214658"
                     /coded_by="XM_041088562.1:63..767"
                     /db_xref="GeneID:121214658"
ORIGIN      
        1 mapamkivlg lltfvtvgmi igalfqlafi rrledsygny hfpttklhtr qsdgnlrlpi
       61 glshwrgdqe aeilrlgyvk peiiswspri ivlhnflsne ecdylkaial prlqvstvvd
      121 aktgmgiksk vrtssgmflr pnerkypmiq aiekrisvfs qipaehgeqi qvlryekdqf
      181 ykphhdyfsd pfnikrsqri atmlmylsdd veggetyfpr aivavvgrll kgcq
//
LOCUS       XP_016693414             106 aa            linear   PLN 06-AUG-2024
DEFINITION  aldo-keto reductase family 4 member C10-like [Gossypium hirsutum].
ACCESSION   XP_016693414
VERSION     XP_016693414.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837925.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..106
                     /product="aldo-keto reductase family 4 member C10-like"
                     /calculated_mol_wt=11769
     Region          <1..68
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     CDS             1..106
                     /gene="LOC107910152"
                     /coded_by="XM_016837925.2:229..549"
                     /db_xref="GeneID:107910152"
ORIGIN      
        1 mlklsvvgei adrhkktpeq vilrwgfqrg ttvlpcslkp drikqnidif nwslsddewk
       61 rlnqiepqvc lfgdgplnnl sgrgltfgsg plqavheied daesna
//
LOCUS       XP_016666951             426 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WHAT'S THIS FACTOR 9, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016666951
VERSION     XP_016666951.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811462.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666951.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..426
                     /product="protein WHAT'S THIS FACTOR 9, mitochondrial"
                     /calculated_mol_wt=49125
     Region          39..370
                     /region_name="PORR"
                     /note="Plant organelle RNA recognition domain; pfam11955"
                     /db_xref="CDD:432218"
     CDS             1..426
                     /gene="LOC107887272"
                     /coded_by="XM_016811462.2:330..1610"
                     /db_xref="GeneID:107887272"
ORIGIN      
        1 msywflcgkg kvfgfscglr rgfnyqqtfs lvnvklkwvk dkaldaviag erdlraacnl
       61 vsilssapdf clpiyhlsrh rgqlglphdh klstfirryp tifhesyvfd sagtlvpcfe
      121 ltlealnlyh eelgvirdnm idlidrlckl lmltkdrilp lqtidqlkwd lglpyfyidn
      181 lipnyadlfs lfrlpddrig lkllswddtl avsqleknva rqteedlknn clafpigftr
      241 gfglkrkcmg wleewqklpy tspyadashl dprtdvsekr ivgvfhelfh ltiqkkterk
      301 nvsnlrkpls lpqkftkvfe rhpgtfyisk msdtqtvvlr eaydcqrivq rhplvdirer
      361 fasmmrkgfr drsrglyket ayighkdplk ivqghkgggn gldsevdsdd dlfseynsde
      421 sihcpt
//
LOCUS       XP_016666950             426 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WHAT'S THIS FACTOR 9, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016666950
VERSION     XP_016666950.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811461.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666950.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..426
                     /product="protein WHAT'S THIS FACTOR 9, mitochondrial"
                     /calculated_mol_wt=49125
     Region          39..370
                     /region_name="PORR"
                     /note="Plant organelle RNA recognition domain; pfam11955"
                     /db_xref="CDD:432218"
     CDS             1..426
                     /gene="LOC107887272"
                     /coded_by="XM_016811461.2:408..1688"
                     /db_xref="GeneID:107887272"
ORIGIN      
        1 msywflcgkg kvfgfscglr rgfnyqqtfs lvnvklkwvk dkaldaviag erdlraacnl
       61 vsilssapdf clpiyhlsrh rgqlglphdh klstfirryp tifhesyvfd sagtlvpcfe
      121 ltlealnlyh eelgvirdnm idlidrlckl lmltkdrilp lqtidqlkwd lglpyfyidn
      181 lipnyadlfs lfrlpddrig lkllswddtl avsqleknva rqteedlknn clafpigftr
      241 gfglkrkcmg wleewqklpy tspyadashl dprtdvsekr ivgvfhelfh ltiqkkterk
      301 nvsnlrkpls lpqkftkvfe rhpgtfyisk msdtqtvvlr eaydcqrivq rhplvdirer
      361 fasmmrkgfr drsrglyket ayighkdplk ivqghkgggn gldsevdsdd dlfseynsde
      421 sihcpt
//
LOCUS       XP_016691099             198 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein [Gossypium hirsutum].
ACCESSION   XP_016691099
VERSION     XP_016691099.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835610.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..198
                     /product="L10-interacting MYB domain-containing protein"
                     /calculated_mol_wt=22158
     Region          20..110
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..198
                     /gene="LOC107908441"
                     /coded_by="XM_016835610.2:2023..2619"
                     /db_xref="GeneID:107908441"
ORIGIN      
        1 mvktrnfmeg dsslatkavw ddeltlifce lcvnevnagn kskthlnlkg wenvialfqa
       61 ktqknygkpq lknkwdalkk dwrlwrellk estgigwcps kkmvdatkew gaakiqenpd
      121 fkgfkkkgie prlnelmwqm fggivatgen awapsfgvlp sgvpmgddap negfgdsdeh
      181 snenecipld evpsnpyh
//
LOCUS       XP_016691100             198 aa            linear   PLN 06-AUG-2024
DEFINITION  L10-interacting MYB domain-containing protein [Gossypium hirsutum].
ACCESSION   XP_016691100
VERSION     XP_016691100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835611.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..198
                     /product="L10-interacting MYB domain-containing protein"
                     /calculated_mol_wt=22158
     Region          20..110
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..198
                     /gene="LOC107908441"
                     /coded_by="XM_016835611.2:1930..2526"
                     /db_xref="GeneID:107908441"
ORIGIN      
        1 mvktrnfmeg dsslatkavw ddeltlifce lcvnevnagn kskthlnlkg wenvialfqa
       61 ktqknygkpq lknkwdalkk dwrlwrellk estgigwcps kkmvdatkew gaakiqenpd
      121 fkgfkkkgie prlnelmwqm fggivatgen awapsfgvlp sgvpmgddap negfgdsdeh
      181 snenecipld evpsnpyh
//
LOCUS       XP_016693441             623 aa            linear   PLN 06-AUG-2024
DEFINITION  2-isopropylmalate synthase 2, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693441
VERSION     XP_016693441.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837952.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..623
                     /product="2-isopropylmalate synthase 2, chloroplastic"
                     /calculated_mol_wt=67218
     Region          2..623
                     /region_name="PLN02321"
                     /note="2-isopropylmalate synthase"
                     /db_xref="CDD:215182"
     CDS             1..623
                     /gene="LOC107910176"
                     /coded_by="XM_016837952.2:91..1962"
                     /db_xref="GeneID:107910176"
ORIGIN      
        1 massiitssk lypfpspsle pslflrstfl pfpssitlps fpskscpksl lissslnpnp
       61 pssqrrppyi pnhipdpnyv rvfdttlrdg eqspgatlts kekldiarql aklgvdiiea
      121 gfpaaskddf eavktiakev gnavdgngyv pvicglsrcn ekdiktawea vkyakrprih
      181 tfiatsaihl eyklrkskee vldiarnmvr ftrslgcndv efspedagrs dreflyeilg
      241 evikagattl nipdtvgitm psefgqliad ikantpgsen viisthcqnd lglstantia
      301 gacagarqve vtingigera gnasmeevvm alkcrgehvl gglytgintr hivmaskmve
      361 eytglhvqph kaivganafa hesgihqdgm lkhkgtyeii spediglers neagivlgkl
      421 sgrhalsdrl kelgyelddv qlgtifwrfk evaeqkkrvt dadlvalvsd evfqpdvvwk
      481 lldlqvtcgt lglstatvkl idadgrehva csvgtgpvds aykavdliik esvslleysm
      541 navtegidai amtrvlirae kshlsthalt gelvhrtfsg tgagmdivvs svkayvsaln
      601 kmlgfkeqnp tkassikrtp ass
//
LOCUS       XP_016693442             438 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized WD repeat-containing protein C2A9.03 [Gossypium
            hirsutum].
ACCESSION   XP_016693442
VERSION     XP_016693442.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837953.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693442.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..438
                     /product="uncharacterized WD repeat-containing protein
                     C2A9.03"
                     /calculated_mol_wt=49913
     Region          185..222
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..266
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <244..>418
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          272..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          313..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          357..391
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..438
                     /gene="LOC107910177"
                     /coded_by="XM_016837953.2:675..1991"
                     /db_xref="GeneID:107910177"
ORIGIN      
        1 msyqqgedfy ymdedfvddm dednygqagg dvdadeydml tkvtdttsaq arkgkdiqgi
       61 pwerlnitre kyrltrleqy knyenmpssg eavdkefkhi kkggnyyeff yntrlikpti
      121 lhfqlrnlvw atskhdvylm snysvmhwss vscnlseiln faghvaptek hpgsllegft
      181 qtqistlavk dnfmvaggfq geltfklldr kgvtfctrtt yddnaitnai eiydslrggi
      241 nfmasnndcs vreydterfq llnhfqfpwp vnhtsvspdq rlitvvgddl dgllvdsqng
      301 ktvatvvghr dysfasawhp dgrifatgnq dktcrvwdir nlsmpvatfk gnlgavrsih
      361 fssdgqfmvv aepadfvhvy niragfqkrq eidffgeisg vslspddesl yigiwdrtya
      421 sllqynkkht ygyldsyl
//
LOCUS       XP_040944497             438 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized WD repeat-containing protein C2A9.03 [Gossypium
            hirsutum].
ACCESSION   XP_040944497
VERSION     XP_040944497.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088563.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..438
                     /product="uncharacterized WD repeat-containing protein
                     C2A9.03"
                     /calculated_mol_wt=49913
     Region          185..222
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..266
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <244..>418
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          272..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          313..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          357..391
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..438
                     /gene="LOC107910177"
                     /coded_by="XM_041088563.1:359..1675"
                     /db_xref="GeneID:107910177"
ORIGIN      
        1 msyqqgedfy ymdedfvddm dednygqagg dvdadeydml tkvtdttsaq arkgkdiqgi
       61 pwerlnitre kyrltrleqy knyenmpssg eavdkefkhi kkggnyyeff yntrlikpti
      121 lhfqlrnlvw atskhdvylm snysvmhwss vscnlseiln faghvaptek hpgsllegft
      181 qtqistlavk dnfmvaggfq geltfklldr kgvtfctrtt yddnaitnai eiydslrggi
      241 nfmasnndcs vreydterfq llnhfqfpwp vnhtsvspdq rlitvvgddl dgllvdsqng
      301 ktvatvvghr dysfasawhp dgrifatgnq dktcrvwdir nlsmpvatfk gnlgavrsih
      361 fssdgqfmvv aepadfvhvy niragfqkrq eidffgeisg vslspddesl yigiwdrtya
      421 sllqynkkht ygyldsyl
//
LOCUS       XP_016693444             951 aa            linear   PLN 06-AUG-2024
DEFINITION  fanconi-associated nuclease 1 homolog isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693444
VERSION     XP_016693444.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837955.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..951
                     /product="fanconi-associated nuclease 1 homolog isoform
                     X1"
                     /calculated_mol_wt=107630
     Region          61..86
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          213..305
                     /region_name="HIRAN"
                     /note="HIRAN domain; pfam08797"
                     /db_xref="CDD:400928"
     Region          345..950
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(345,389,393..394,402,405,446..448,464..466,525,
                     528..530,533,572,625,628,631..632,634,658,662,665,
                     669..670,693,700,703,741..742,887,918,920,924)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..951
                     /gene="LOC107910178"
                     /coded_by="XM_016837955.2:216..3071"
                     /db_xref="GeneID:107910178"
ORIGIN      
        1 mltgreslsr ligkrrrflp nlqsilslpi rsslnllsdk nggltetess kgkveisssd
       61 lvtcpvcgsk vrgedytins hldrclsrrt nrkltqrtll elnfgcsqsk lqissdeseq
      121 llssdlsknc sdyeenvtrc fskidpreek shdqgrqfph tesvkqidva gsaenpisdg
      181 rantmvdfsa lstdneesrn hmdgtadsis gmaidtfivg rkfsdekevn lganiyllrd
      241 pdnikdsnai kvlsassacc kvlgylplel aqylspliek yclsfegyvi svpkrsldav
      301 piqivcqnsi fngkkgcdef ealhlwqkal qvvefaknrp pnttkyqqnf clllkevlts
      361 sphlftkdkk kfiesftsls edsqrlfvrl ytrkgpwfrl stimypeicn pqqavkelsa
      421 tgylylfedt tklhddemkd llslltvsel rdilctlrkk cnqgsrkqnl iasllscykg
      481 gscpvlqrli lerteicirt speaeslfwr aerlfflnge qdlsafllvd lgivkyptyn
      541 ciileqifsn esdllayeea ievaqvidqs ldennfelvl rcimiadsri sccpeklids
      601 tspdlmaifr scfsaswvys kvillgisfl ecerrykdai hllrrlldcf tcdtrrgywt
      661 vrlavdlehi gcpneslsva eaglldpwvr agsrmalqrr vlrlakpprr wktpsfsvsl
      721 krkivevhiq grplnceagr ksrfygedge qcgveqlalq yyareggwqg vhtesgiwmt
      781 ifgllmwdil lsdvpnvfrt rfqtapldme tdhfylarks liepqlqkih dglaeeilit
      841 swelhmgtac rgvnwdqhsl sdlraavsci rgpclaslcr hlaqdyssws sgmpdlllwr
      901 fhgdykgeak lvevkgprdq lseqqrawll llmdcgfnae vckvsttgts p
//
LOCUS       XP_016693446             926 aa            linear   PLN 06-AUG-2024
DEFINITION  fanconi-associated nuclease 1 homolog isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693446
VERSION     XP_016693446.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837957.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..926
                     /product="fanconi-associated nuclease 1 homolog isoform
                     X2"
                     /calculated_mol_wt=104745
     Region          61..86
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          213..>265
                     /region_name="HIRAN"
                     /note="HIRAN domain; cl07418"
                     /db_xref="CDD:415200"
     Region          320..925
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(320,364,368..369,377,380,421..423,439..441,500,
                     503..505,508,547,600,603,606..607,609,633,637,640,
                     644..645,668,675,678,716..717,862,893,895,899)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..926
                     /gene="LOC107910178"
                     /coded_by="XM_016837957.2:216..2996"
                     /db_xref="GeneID:107910178"
ORIGIN      
        1 mltgreslsr ligkrrrflp nlqsilslpi rsslnllsdk nggltetess kgkveisssd
       61 lvtcpvcgsk vrgedytins hldrclsrrt nrkltqrtll elnfgcsqsk lqissdeseq
      121 llssdlsknc sdyeenvtrc fskidpreek shdqgrqfph tesvkqidva gsaenpisdg
      181 rantmvdfsa lstdneesrn hmdgtadsis gmaidtfivg rkfsdekevn lganiyllrd
      241 pdnikdsnai kvlsassacc kgyvisvpkr sldavpiqiv cqnsifngkk gcdefealhl
      301 wqkalqvvef aknrppnttk yqqnfclllk evltssphlf tkdkkkfies ftslsedsqr
      361 lfvrlytrkg pwfrlstimy peicnpqqav kelsatgyly lfedttklhd demkdllsll
      421 tvselrdilc tlrkkcnqgs rkqnliasll scykggscpv lqrlilerte icirtspeae
      481 slfwraerlf flngeqdlsa fllvdlgivk yptynciile qifsnesdll ayeeaievaq
      541 vidqsldenn felvlrcimi adsrisccpe klidstspdl maifrscfsa swvyskvill
      601 gisflecerr ykdaihllrr lldcftcdtr rgywtvrlav dlehigcpne slsvaeagll
      661 dpwvragsrm alqrrvlrla kpprrwktps fsvslkrkiv evhiqgrpln ceagrksrfy
      721 gedgeqcgve qlalqyyare ggwqgvhtes giwmtifgll mwdillsdvp nvfrtrfqta
      781 pldmetdhfy larksliepq lqkihdglae eilitswelh mgtacrgvnw dqhslsdlra
      841 avscirgpcl aslcrhlaqd ysswssgmpd lllwrfhgdy kgeaklvevk gprdqlseqq
      901 rawllllmdc gfnaevckvs ttgtsp
//
LOCUS       XP_016693448             134 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine proteinase inhibitor 5 [Gossypium hirsutum].
ACCESSION   XP_016693448
VERSION     XP_016693448.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837959.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..134
                     /product="cysteine proteinase inhibitor 5"
                     /calculated_mol_wt=14979
     Site            order(30,89..91,93)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          35..131
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
     CDS             1..134
                     /gene="LOC107910179"
                     /coded_by="XM_016837959.2:133..537"
                     /db_xref="GeneID:107910179"
ORIGIN      
        1 makadlmvis llllvtlcft avdgygrmvg grteitdvkt neevqelgrf aveeynrshg
       61 lgrwrgfvss sngrraelvf srvleaqkqv vsgikyylki eamenklskt fesvvvvkpw
      121 lhskellhfs psae
//
LOCUS       XP_016693449             966 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693449
VERSION     XP_016693449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..966
                     /product="uncharacterized protein"
                     /calculated_mol_wt=104698
     CDS             1..966
                     /gene="LOC107910181"
                     /coded_by="XM_016837960.2:255..3155"
                     /db_xref="GeneID:107910181"
ORIGIN      
        1 mdnqghgknr ssveakimer rgweksirgv gamsnrseie vfsdaatefh dgelgwstdi
       61 vsqadkdlas aisfkdcedf dilqsprnsv dgsqnenpvp ksmpvlpvgt sghhdvglsy
      121 skdsedknss asdvvsiete tlkgiseesr kvnagvsvaa csvgqatdan enegskfnen
      181 lssalvlpsk hagkisetes isetrldets dmssktcmsg ngehetdgkg npgisfeenl
      241 mdaglksena edlisetvla dkiveleens dnlalnmvid dlsskaestn yknvstgtfe
      301 lqtdaahgtd ssidvdsnev nekkekkkes gyvlcspddi pvvddaeikl egfkdhtrvn
      361 lpqletlask eiivdkedev kdhvsqeksd tfvsnpmdee iaiedsykls gnneaiieev
      421 fvignadviq idrasdalvd adttenekdr vvqslkeqql lnvadelnkg snvlspldad
      481 ttenekdqev lslkeqqpvy vaddlqrmgf qgsmlndvpd vkpmvtdadv eagklnnvvg
      541 denyvknmrt scestdsssl lhanqafhll evedtddigt rkteksdine vesgegpeeg
      601 yistkmdsts eststhhqsa ivteevnete glqsdsvsns edykkepeis kgnkvhgeca
      661 aedlmasavd ssernefert svnqlkkelv hsgpvndshn resgvaasqa saailqgevk
      721 ngsskpqlnt tvgdfliesn sqtdsleghw gsvsvlstqs dnqaamdtet lpstgsqals
      781 eaekantkks klaskeqhfn ksdefeppsf mtlvegrgsd qkaaavseal tggnpragwf
      841 pslthatnes qgrkkneeii rkvanwnanq hgplknlans epkpkspnln qnpspntnpt
      901 vlaprddggk vstmmgpetp maeatnveae kewksparyp sdrkrekrkv kgrplwvqfv
      961 ccssan
//
LOCUS       XP_016693450             769 aa            linear   PLN 06-AUG-2024
DEFINITION  protein transport protein SEC23 [Gossypium hirsutum].
ACCESSION   XP_016693450
VERSION     XP_016693450.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837961.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..769
                     /product="protein transport protein SEC23"
                     /calculated_mol_wt=84853
     Region          1..769
                     /region_name="PLN00162"
                     /note="transport protein sec23; Provisional"
                     /db_xref="CDD:215083"
     CDS             1..769
                     /gene="LOC107910182"
                     /coded_by="XM_016837961.2:304..2613"
                     /db_xref="GeneID:107910182"
ORIGIN      
        1 mansdpegvd gvrmtwnvwp rtkleaskcv iplaasiapi pphsdiptlp yaplrcrtcs
       61 aalnaysrvd flakiwicpf cyqrnqfpph yamisetnlp celypqyttv qytlqtnpdp
      121 nnpsnapqlq pvfvfvldtc mieeelvfak salkqaigll peqalvgfvs fgtqahvhel
      181 gfteiskvyv fkgskeiske qvleqlglpa agrrstagyp kglqngftnt vvnrfllpps
      241 dceftlnsll delqtdqwpv qaghrasrct gvalsvaagl lgaclpgtga riialvggpc
      301 tegpgtivsk dlsepvrshk dlfkdaapyf kkavkfydsl akqlvdqghv ldlfasaldq
      361 vgvaemkvai ertgglvvla esfghsvfkd sfklvfedge qslglcfngm leiscskeik
      421 vqgiigpcts lekkgpnvsd mvigegnttt wkmcgldkst cltvifdlss tdqsnvpetv
      481 npqfylqflt syqdpegktl irvttvtrqw vdisvsteel ihgfdqetaa vvmaritslk
      541 meteegfdpt rwldrnlirf cskfgnyren dpssfslnpc fslfpqfifn lrrsqfvqvf
      601 nnspdetayf rvllnkenit naavmvqpsl isysfnsppq palldvasis adhillldsy
      661 fsivvfhgmt iaqwrnmgfq nqpehqafal lleapqvdaq iiirdrfpvp rlvvcdqhgs
      721 qarfllakln psatynnatd iapgsdiift ddvslqvfce hlqrlavqs
//
LOCUS       XP_016693963             752 aa            linear   PLN 06-AUG-2024
DEFINITION  putative protein FAR1-RELATED SEQUENCE 10 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693963
VERSION     XP_016693963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838474.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..752
                     /product="putative protein FAR1-RELATED SEQUENCE 10
                     isoform X1"
                     /calculated_mol_wt=87319
     Region          92..739
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..752
                     /gene="LOC107910591"
                     /coded_by="XM_016838474.2:878..3136"
                     /db_xref="GeneID:107910591"
ORIGIN      
        1 mttifssmkg lnfnivqrra lrlgskkhft cfctkmtmkp ssniwirrqq cpcgdwkcfv
       61 kyegndqtsv ssqliknett stsssseavf mpyvgqifkt dedafeyysn farkngfsir
      121 karstesqnl giyrrdfvcy rsgfnqprkk anvehprdrk svrcgcdakl yltkeivngv
      181 tqwyisqfsn vhnhelledd qvrllpayrk iqeadqeril llskagfpvn rivkvlelek
      241 gvqpgqlpfi ekdvrnfvrt ckksvqenda lltekrendt lelleackam aerdadfvyd
      301 yttdenskve niswsyadsv raytvfgdvv tfdttyrsit yglllgvwfg idnhgkpvfl
      361 gcallqdesl nsfawalqvr ghnylfpicn clivylwlss feqtflrfmr grcpqtvltd
      421 idsslrdaia relpdtkhvi cswhvhskls swftpslgsq yeefkaefdm lchlegieef
      481 ehqwnhlvar felasdkhia llfsyrtswp lsyirsyfla rsmtaefyqs ldeffkrils
      541 gqtclqlffe qvgfaadlrn rskealqymh tktclpieen arsiltpyaf nalqheivls
      601 mqyattelan gsylvrhykk megeylviwi sqdeqihcsc kefehsgilc rhclrvltvk
      661 nyfeipekyi lfrwrlessl valedrngqc nsdeyaqvfh slaatlltes lftkerfnhv
      721 hrelsrlleh vqnmpvsnef asnmaannis es
//
LOCUS       XP_040944498             727 aa            linear   PLN 06-AUG-2024
DEFINITION  putative protein FAR1-RELATED SEQUENCE 10 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944498
VERSION     XP_040944498.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088564.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..727
                     /product="putative protein FAR1-RELATED SEQUENCE 10
                     isoform X2"
                     /calculated_mol_wt=84321
     Region          92..714
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..727
                     /gene="LOC107910591"
                     /coded_by="XM_041088564.1:1227..3410"
                     /db_xref="GeneID:107910591"
ORIGIN      
        1 mttifssmkg lnfnivqrra lrlgskkhft cfctkmtmkp ssniwirrqq cpcgdwkcfv
       61 kyegndqtsv ssqliknett stsssseavf mpyvgqifkt dedafeyysn farkngfsir
      121 karstesqnl giyrrdfvcy rsgfnqprkk anvehprdrk svrcgcdakl yltkeivngv
      181 tqwyisqfsn vhnhelledd qvrllpayrk iqeadqeril llskagfpvn rivkvlelek
      241 gvqpgqlpfi ekdvrnfvrt ckksvqenda lltekrendt lelleackam aerdadfvyd
      301 yttdenskve niswsyadsv raytvfgdvv tfdttyrsit yglllgvwfg idnhgkpvfl
      361 gcallqdesl nsfawalqtf lrfmrgrcpq tvltdidssl rdaiarelpd tkhvicswhv
      421 hsklsswftp slgsqyeefk aefdmlchle gieefehqwn hlvarfelas dkhiallfsy
      481 rtswplsyir syflarsmta efyqsldeff krilsgqtcl qlffeqvgfa adlrnrskea
      541 lqymhtktcl pieenarsil tpyafnalqh eivlsmqyat telangsylv rhykkmegey
      601 lviwisqdeq ihcsckefeh sgilcrhclr vltvknyfei pekyilfrwr lesslvaled
      661 rngqcnsdey aqvfhslaat llteslftke rfnhvhrels rllehvqnmp vsnefasnma
      721 annises
//
LOCUS       XP_016693966             717 aa            linear   PLN 06-AUG-2024
DEFINITION  putative protein FAR1-RELATED SEQUENCE 10 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016693966
VERSION     XP_016693966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838477.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..717
                     /product="putative protein FAR1-RELATED SEQUENCE 10
                     isoform X3"
                     /calculated_mol_wt=83271
     Region          57..704
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..717
                     /gene="LOC107910591"
                     /coded_by="XM_016838477.2:372..2525"
                     /db_xref="GeneID:107910591"
ORIGIN      
        1 mtmkpssniw irrqqcpcgd wkcfvkyegn dqtsvssqli knettstsss seavfmpyvg
       61 qifktdedaf eyysnfarkn gfsirkarst esqnlgiyrr dfvcyrsgfn qprkkanveh
      121 prdrksvrcg cdaklyltke ivngvtqwyi sqfsnvhnhe lleddqvrll payrkiqead
      181 qerilllska gfpvnrivkv lelekgvqpg qlpfiekdvr nfvrtckksv qendalltek
      241 rendtlelle ackamaerda dfvydyttde nskvenisws yadsvraytv fgdvvtfdtt
      301 yrsityglll gvwfgidnhg kpvflgcall qdeslnsfaw alqvrghnyl fpicnclivy
      361 lwlssfeqtf lrfmrgrcpq tvltdidssl rdaiarelpd tkhvicswhv hsklsswftp
      421 slgsqyeefk aefdmlchle gieefehqwn hlvarfelas dkhiallfsy rtswplsyir
      481 syflarsmta efyqsldeff krilsgqtcl qlffeqvgfa adlrnrskea lqymhtktcl
      541 pieenarsil tpyafnalqh eivlsmqyat telangsylv rhykkmegey lviwisqdeq
      601 ihcsckefeh sgilcrhclr vltvknyfei pekyilfrwr lesslvaled rngqcnsdey
      661 aqvfhslaat llteslftke rfnhvhrels rllehvqnmp vsnefasnma annises
//
LOCUS       XP_016693965             717 aa            linear   PLN 06-AUG-2024
DEFINITION  putative protein FAR1-RELATED SEQUENCE 10 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016693965
VERSION     XP_016693965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838476.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..717
                     /product="putative protein FAR1-RELATED SEQUENCE 10
                     isoform X3"
                     /calculated_mol_wt=83271
     Region          57..704
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..717
                     /gene="LOC107910591"
                     /coded_by="XM_016838476.2:288..2441"
                     /db_xref="GeneID:107910591"
ORIGIN      
        1 mtmkpssniw irrqqcpcgd wkcfvkyegn dqtsvssqli knettstsss seavfmpyvg
       61 qifktdedaf eyysnfarkn gfsirkarst esqnlgiyrr dfvcyrsgfn qprkkanveh
      121 prdrksvrcg cdaklyltke ivngvtqwyi sqfsnvhnhe lleddqvrll payrkiqead
      181 qerilllska gfpvnrivkv lelekgvqpg qlpfiekdvr nfvrtckksv qendalltek
      241 rendtlelle ackamaerda dfvydyttde nskvenisws yadsvraytv fgdvvtfdtt
      301 yrsityglll gvwfgidnhg kpvflgcall qdeslnsfaw alqvrghnyl fpicnclivy
      361 lwlssfeqtf lrfmrgrcpq tvltdidssl rdaiarelpd tkhvicswhv hsklsswftp
      421 slgsqyeefk aefdmlchle gieefehqwn hlvarfelas dkhiallfsy rtswplsyir
      481 syflarsmta efyqsldeff krilsgqtcl qlffeqvgfa adlrnrskea lqymhtktcl
      541 pieenarsil tpyafnalqh eivlsmqyat telangsylv rhykkmegey lviwisqdeq
      601 ihcsckefeh sgilcrhclr vltvknyfei pekyilfrwr lesslvaled rngqcnsdey
      661 aqvfhslaat llteslftke rfnhvhrels rllehvqnmp vsnefasnma annises
//
LOCUS       XP_016693967             342 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693967
VERSION     XP_016693967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..342
                     /product="zinc finger CCCH domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=38333
     Region          60..331
                     /region_name="COG5152"
                     /note="Uncharacterized conserved protein, contains RING
                     and CCCH-type Zn-fingers [General function prediction
                     only]"
                     /db_xref="CDD:227481"
     CDS             1..342
                     /gene="LOC107910592"
                     /coded_by="XM_016838478.2:237..1265"
                     /db_xref="GeneID:107910592"
ORIGIN      
        1 madssepqdp gkelrqsete pqqseqvcnf frkptkgkni rkrtineded edsrngtsll
       61 hnqkkaskpd nklyfstgss ksatatesst eshkpvfqfe sskeiqvqnd sgatailete
      121 teftkdarai rekvlkraee alkgkstssg geklytgmhg yvdhkagfrr eqtvasekag
      181 gshgplrasa hirvsarfdy qpdickdyke tgycgygdsc kfmhdrgdyk sgwqlekewe
      241 eaekarkrnl algegdddde agvvqsdddd ddtlpfacfi crqpfvdpvv tkckhyfceh
      301 calkhhaknk kcfvcnqptl gifnaaheir rkmaeegklk gh
//
LOCUS       XP_016693968             324 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693968
VERSION     XP_016693968.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="zinc finger CCCH domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=36136
     Region          60..308
                     /region_name="COG5152"
                     /note="Uncharacterized conserved protein, contains RING
                     and CCCH-type Zn-fingers [General function prediction
                     only]"
                     /db_xref="CDD:227481"
     CDS             1..324
                     /gene="LOC107910592"
                     /coded_by="XM_016838479.2:228..1202"
                     /db_xref="GeneID:107910592"
ORIGIN      
        1 madssepqdp gkelrqsete pqqseqvcnf frkptkgkni rkrtineded edsrngtsll
       61 hnqkkaskpd nklyfstgss ksatatesst eshkpvfqfe sskeiqvqnd sgatailete
      121 teftkdarai rekvlkraee alkgkstssg geklytgmhg yvdhkagfrr eqtvasekag
      181 gshgplrasa hirvsarfdy qpdickdyke tgycgygdsc kfmhdrgdyk sgwqlekewe
      241 eaekarkrnl algegdddde agvvqsdddd ddtlpfacfi crqpfvdpvv tkckhyfceh
      301 calklskdhl pdipvekgmi gspi
//
LOCUS       XP_016693969             930 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693969
VERSION     XP_016693969.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838480.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..930
                     /product="uncharacterized protein"
                     /calculated_mol_wt=105113
     Region          217..267
                     /region_name="DUF3741"
                     /note="Protein of unknown function (DUF3741); pfam12552"
                     /db_xref="CDD:432630"
     Region          764..911
                     /region_name="DUF4378"
                     /note="Domain of unknown function (DUF4378); pfam14309"
                     /db_xref="CDD:464133"
     CDS             1..930
                     /gene="LOC107910593"
                     /coded_by="XM_016838480.2:855..3647"
                     /db_xref="GeneID:107910593"
ORIGIN      
        1 makrsnscsl rykkdqlgcm wglismldfr hsqstrrlls drrcgdrnav gapnarnkpe
       61 mltssaedcp rpldgeeert aidackpsvk klleeemsge vakkeasnte vevkqfysge
      121 gddgrknwnr knktckksss sslhmdvaen lvsersrlhk peqqttsnld mdnlmeeffr
      181 kihqkrvncm nddqleqnpk sygseerlne aikvlvsqkf lignqltedg ellasnevmd
      241 alpissldee lflkllpdln llkyiqdlpd ahlkdeeskp laesnfsdme stglrqrnep
      301 vnrkqrnffr rklksqerel sdgnkasqas nkievlkpgs tclqtpetgs sldspsdsqy
      361 ivshrepnek vgshfflaei krklkhamgr dqhriptngi sekfpaeqqn sedsgrlkey
      421 fgmnsptkdq ffierigrps igvakgekts klkgselsme yetidfsmkr vsniyieakk
      481 hlsdlltned qnedllstqv pktlgrilsl peyntspvss pgqnlehsft tahmrfagsd
      541 klqmvsendr fvsllsmrae ktdgqlcise nksdnevesd naisnnldts vnndkedpif
      601 csikdelssk esvsivkate mmvheesksl dissetsgss iitddknvdi yevcdekqnp
      661 wylkqdssev dqqpfsplss psdssvmkkv eclesvtdip ersspvsvle pifaddlisp
      721 asirsysget siqplrirfe ehdslatnqs nriktcmndk esifehikav lqassfswde
      781 vyirslssdl lidpllvdev eylpnqlcqd qkllfdcine vvrevceyyf gspsvsfvkp
      841 nirpipnmqn tiqevwegvy whllptplpc tldlvvrkdl aktgtwmdlq ldtgyigvei
      901 geaifedlve dtitsyings weceynvlpa
//
LOCUS       XP_016693970             346 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein LWD1 [Gossypium hirsutum].
ACCESSION   XP_016693970
VERSION     XP_016693970.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838481.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="WD repeat-containing protein LWD1"
                     /calculated_mol_wt=38802
     Region          <39..130
                     /region_name="mS81"
                     /note="Tetrahymena thermophila ribosomal protein mS81 and
                     similar proteins; cd23689"
                     /db_xref="CDD:467903"
     Region          85..128
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <96..296
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          138..175
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          182..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..297
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..346
                     /gene="LOC107910594"
                     /coded_by="XM_016838481.2:187..1227"
                     /db_xref="GeneID:107910594"
ORIGIN      
        1 mtatsdpnpe vsdeqqkrse iytyeapwyi yamnwsvrrd kkyrlaiasl leqypnrlqi
       61 vqlddsngei rsdpnlsfdh pypatktifi pdkdcqkpdl latssdflri wrisddgsrv
      121 dlksllngnk nsefcgplts fdwneaepkr igtssidttc tiwdieketv dtqliahdke
      181 vydiawggvg vfasvsadgs vrvfdlrdke hstiiyesse pdaplvrlgw nkqdprymat
      241 iimdsakvvv ldirfptlpv velrrhqasv navawaphss chictagdds qaliwdlssm
      301 gqpvkggldp ilaytagaei eqlqwsssqp dwvaiafstk lqilrv
//
LOCUS       XP_016693971            2739 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NO VEIN [Gossypium hirsutum].
ACCESSION   XP_016693971
VERSION     XP_016693971.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693971.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..2739
                     /product="protein NO VEIN"
                     /calculated_mol_wt=307888
     Region          <10..>111
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          1157..>1250
                     /region_name="PRK14083"
                     /note="HSP90 family protein; Provisional"
                     /db_xref="CDD:237603"
     Region          2619..2703
                     /region_name="NOV_C"
                     /note="Protein NO VEIN, C-terminal; pfam13020"
                     /db_xref="CDD:463774"
     CDS             1..2739
                     /gene="LOC107910596"
                     /coded_by="XM_016838482.2:61..8280"
                     /db_xref="GeneID:107910596"
ORIGIN      
        1 mrgrhnghrp frppgghpps qppfepsnpn falqdpnvlq flqalitpvq pnfalqqspn
       61 nfffqnsnay slpqnsiipq pqpqqvnnps ssqsqlhnhr gsaasgqvpk evqeranqav
      121 nqawreliat gnsvtawkvs eaalvalqad swsslgldmq gipslqrlma iegrvnafiq
      181 cfagvrritt lyelelaice negvrtyekl elgpllrhpl ilryfsvknc tevfkitsed
      241 iiahihefid ghknqeilid eflefvadkq aatskeklgv rirslamyts fikkaegkrd
      301 fevkkcqkgl klrkhckglk lkerymnisq qvesfmsvhk dfcgkhirfd sssteeedas
      361 dsahehernd ndegsdselp sevisssdrv sscpypsaae elirlglkdr mpkpspatas
      421 skrndctgpy krkrkidsps psisrppkls rrdglkqati pnengnqskd lssldeadil
      481 lsnnlmktfi ttwkeacreh tmeevlqrml cfysstakkr kkmksmlssy pfigllnvav
      541 tsikkgmwds mydtiqgvrk leltttsdnc seyesidvep sekdalipts idcvtvedvi
      601 kkinayfkhn qeigkslkeq klvllrklfn ceswlaeqfy vkdfrslglg effmflerha
      661 sllpielhkl laaeiceksp levcilqhll iafisqasyn lqdnqiitke vinkllmkqc
      721 plfnfkvken gsmedflefv ekskndissk cvifsasllg mchdghslay denyssetsv
      781 qnlrkvksaa skdamavllr apmlsdlysw lhwdvlfaps lgslilwlfn evrakellcl
      841 vtkdgkvvri dqsatidsfl eaalkgsafe talmllslcs itggikhlpl allkhhaqma
      901 fevllknqme nieaddyqns imngkapfrp kfqedvsvgn sangllinli emkkaashas
      961 rffldclcyl psefhgcaad illhgmravi kncpsailsa cnelnqrvml helgfslgiv
     1021 ewiqdyhvfc stdmsnlfls seglgmktsm selktrsnfl qnaidrpsyt ekemivsdrt
     1081 dkkaavcdti sceevsaerm gyknrersse vdeqtdaalv iesirrdefg ldpslssves
     1141 sllkkqharl gralhclsqe lysqdshfll elvqnaddnv yseneeptla fivqepgiiv
     1201 lnneqgfsaq niralcdvgs stkkgcsgyi gkkgigfksv frvtdapeih sngfhvkfdi
     1261 sdgqigfvlp tlvppcnvds fkmllggdts qlvnkcwntc ivlpfrsvts kgndmnnivs
     1321 mfsdlnpsll lflhrlqciv frnmlndsfv imrkeivgng ivkvscgven mtwflasqkl
     1381 qadfihrdvq iteisiaftl letdcgcyrp fldqqpvfaf lplrtyglkf ilqgdfvlps
     1441 sreevdvdsp wnqwllseyp slfvsaersf cslpcfrenp gkavsvymsf vplvgevhgf
     1501 fsslprmiis klrmsnclil egdkskwvps ckvlrgwtes arklfpdsll hdhlglgyld
     1561 kdiilsdala ralgiqdygp evlvqiissl ckrgnglkpm glawisswln efyaisfqss
     1621 gqasmnceie tvlvetlrqt pfiplsdgtf tsvdegtiwl hsdvmntvfe gdlgleafpt
     1681 lyaklrfvsp alfsetavsi scignitsvl hnigvqqlsa heiikvhilp dmsdervkts
     1741 dknlmidylc fvmihlqssc pscrverdyi iselrnkafi ltnygfkrpv dvsvhfskef
     1801 enpvninrli ngvdlkwhev dktylkhpas rllssglkkw reffleigvt dfvqvvqldk
     1861 sfvdmshtvl qslssdwdli shgsvvkdwe syelvqllsl lsgsgnregc kyllevldef
     1921 wdvhfsekai gccnfksgtd iktfrssflc kiceipwvvs smddklhypk elfhdcdavh
     1981 ailgacapya vpkvrngklv keigfrtevt iddalkilkl wrsnssfkas vaqmsrlytf
     2041 iwsevrnsrk eiaeefhaas sifvpyklas rpddvvsglf lsskevywhd stgamdetyn
     2101 hsqsgssenq cplnrtlsni ypglrdffvn eckvpekpsf cnyldillql savtlpsqaa
     2161 havfqvflkw adalksglls tedihhmkec lnkseytvlp tvldkwvslh psfglvcwcd
     2221 deklkkrfkh ldnidflyfg tlndierell qtkvsilirt fgipvlsevv treaiyskra
     2281 dgrfkaslvn walpfaqryl ysvhldkyiq lkqsgfsnis dlqivvvdel yyrnvikscg
     2341 ivskkkfqct cllqdnilyt tpesdshavy melscllfdg apdlhlanfl hmvttmaisg
     2401 sneeqteffi lnsqrmpklp neepvwslss vtseaesnef lessatteek eqptskskki
     2461 sgiysnwppv dwktapglsk rpapisqpin gskhidshts sdgpvaidtd mfmedntett
     2521 spvpilpdse sldhqygntt nptgsgvrta fgtvdsgvri afdpvdlglv senpqvvsle
     2581 ftkrnqlntg fvssefsqrd qlltgtpnta qalltgklge laafkyftgt sgkkvkwvnk
     2641 dnetglpydl vvedergnie yvevkatksa rkdwfnistr ewqfaaekgd sfsiahvfll
     2701 sekdakiavy tnpiklcqlg klqlvvlmpr qrkdstivs
//
LOCUS       XP_040944499             413 aa            linear   PLN 06-AUG-2024
DEFINITION  UBX domain-containing protein 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944499
VERSION     XP_040944499.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088565.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..413
                     /product="UBX domain-containing protein 4 isoform X1"
                     /calculated_mol_wt=46560
     Region          111..159
                     /region_name="UBA_PUB_plant"
                     /note="UBA domain found in plant PNGase/UBA or UBX (PUB)
                     domain-containing proteins; cd14290"
                     /db_xref="CDD:270476"
     Region          307..413
                     /region_name="PUB_UBA_plant"
                     /note="PNGase/UBA or UBX (PUB) domain of plant
                     Ubiquitin-associated (UBA) domain containing proteins;
                     cd10461"
                     /db_xref="CDD:198419"
     Site            order(327,330..331,334,343..344,346..348,351,353,357)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:198419"
     CDS             1..413
                     /gene="LOC107910294"
                     /coded_by="XM_041088565.1:156..1397"
                     /db_xref="GeneID:107910294"
ORIGIN      
        1 magvslkcgd cgallksvee aqehaeltsh snfsesteav lnlvcsscgk pcrskiesdl
       61 htkrtghtef idktleaakl islevpkvak eseeaiaags tsepeemvvp evdkklleel
      121 eamgfptara tralhfsgnt sleaavnwvv eheadsdidq mpmvpvnrhv easkpsltpe
      181 emklkaqelr erarkkkeee errmererek erirvgkell eakrieeene rkrlvalrka
      241 ekeeekrare kirqkleedk aerrrklglp peepsaapkp sapiveekks alpvrpatka
      301 eqmreclrsl kqnhkdddak vkrafqtllt yignvarnpd eekfrkirln nqtfqdrvgs
      361 vkggveflel cgfekvegee flflsrnkvd mqvlnsagse lnsainnpff gvl
//
LOCUS       XP_040944500             406 aa            linear   PLN 06-AUG-2024
DEFINITION  vicilin-like seed storage protein At2g18540 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944500
VERSION     XP_040944500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088566.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="vicilin-like seed storage protein At2g18540
                     isoform X2"
                     /calculated_mol_wt=45872
     Region          104..152
                     /region_name="UBA_PUB_plant"
                     /note="UBA domain found in plant PNGase/UBA or UBX (PUB)
                     domain-containing proteins; cd14290"
                     /db_xref="CDD:270476"
     Region          300..406
                     /region_name="PUB_UBA_plant"
                     /note="PNGase/UBA or UBX (PUB) domain of plant
                     Ubiquitin-associated (UBA) domain containing proteins;
                     cd10461"
                     /db_xref="CDD:198419"
     Site            order(320,323..324,327,336..337,339..341,344,346,350)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:198419"
     CDS             1..406
                     /gene="LOC107910294"
                     /coded_by="XM_041088566.1:143..1363"
                     /db_xref="GeneID:107910294"
ORIGIN      
        1 magvslkcgd cgallksvee aqehaeltsh snfsesteav lnlvcsscgk pcrskiesdl
       61 htkrtghtef idktleaakl islevpkvak eseeaiaaem vvpevdkkll eeleamgfpt
      121 aratralhfs gntsleaavn wvveheadsd idqmpmvpvn rhveaskpsl tpeemklkaq
      181 elrerarkkk eeeerrmere rekerirvgk elleakriee enerkrlval rkaekeeekr
      241 arekirqkle edkaerrrkl glppeepsaa pkpsapivee kksalpvrpa tkaeqmrecl
      301 rslkqnhkdd dakvkrafqt lltyignvar npdeekfrki rlnnqtfqdr vgsvkggvef
      361 lelcgfekve geeflflsrn kvdmqvlnsa gselnsainn pffgvl
//
LOCUS       XP_016694211             402 aa            linear   PLN 06-AUG-2024
DEFINITION  ABSCISIC ACID-INSENSITIVE 5-like protein 5 [Gossypium hirsutum].
ACCESSION   XP_016694211
VERSION     XP_016694211.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838722.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694211.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..402
                     /product="ABSCISIC ACID-INSENSITIVE 5-like protein 5"
                     /calculated_mol_wt=43467
     Region          325..379
                     /region_name="bZIP_plant_BZIP46"
                     /note="Basic leucine zipper (bZIP) domain of
                     uncharaterized Plant BZIP transcription factors: a
                     DNA-binding and dimerization domain; cd14707"
                     /db_xref="CDD:269855"
     Region          326..377
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269855"
     Site            order(329..330,332..334,336..341,343..345)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269855"
     Site            order(344,347..348,351..352,354..355,358..359,361..362,
                     365..366,368..369,372..373,375..376)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269855"
     CDS             1..402
                     /gene="LOC107910746"
                     /coded_by="XM_016838722.2:274..1482"
                     /db_xref="GeneID:107910746"
ORIGIN      
        1 meanmklknf gsnqplpadg ggntllsrqp siysltfdef qstmggigkd fgsmnmdell
       61 kniwsaeetq tmafysggld aygglqrqgs stlprtlsqk tvdevwkdis keysigkdgi
      121 gtaagtnhvp qrhqtlgemt leeflvkagv vredtqfagk dnnvnggffd gfqqggrtpn
      181 fmgnrlsevg fqasnlplnv ngvksnqhql pqqqqpifpr qpavgfgfqm plqsggqlgs
      241 pgnrggitgm gdqgppngli qggkmgmvgl ggpvsvatgs panhfssdgi gkssadtssv
      301 spvpyvlngs srgrkcsave kvaerrqkrm iknresaars rarkqaytte leaklaklke
      361 eneelrkkha elmemqknqv memnmqqgpk kqclrrtrtg pw
//
LOCUS       XP_040944501             634 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944501
VERSION     XP_040944501.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088567.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..634
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70822
     Region          169..190
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          296..314
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     CDS             1..634
                     /gene="LOC107910672"
                     /coded_by="XM_041088567.1:190..2094"
                     /db_xref="GeneID:107910672"
ORIGIN      
        1 mlrtivemsk srkrsskwdl keerqyslen vqdsawfana cdresehgsf spefgrngnk
       61 wsaikskhgl pskeylhgsk cgennsdcat nwktttpcdg detysmkksp tlndrrqqnc
      121 hhslksdwsr sqrsrsrsrs rsrsrspvhg igrqpgflem trngsgvstq ickkfmagrc
      181 rrgslchflh qdiqshedgs dnrqkrasvs kyitcnedky yliesgrstd cctdyrkgnc
      241 rrgascrsah dgvsdgfskg sineisrere nnkrnkltsp eqdvereark sssipckyfs
      301 tgnchngnyc rfshpastec drgqwgqssv ssdmlldgae ltdidasfnv dkygnasngs
      361 dadvsnesei pwtgpkwsaa dasidlhnsw agskqsdisv ylgasklnkd tnefsncnid
      421 erwqhgydac gknsesnvhc krididkedl kkienvgvnt gvsepkgaee sivamemspm
      481 wnrrlhssvd kershssept pvgtslrahg kniiekasgh ahdehaasql msieesnfhl
      541 dhmtrgssca vlrsfdhpgp sssslpysnl ntvrqselsf psnevnvkvp qnnlllqeek
      601 psnklnigdt nilhgnygfp stqnmealnr hpiy
//
LOCUS       XP_016694100             634 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694100
VERSION     XP_016694100.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838611.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..634
                     /product="uncharacterized protein"
                     /calculated_mol_wt=70822
     Region          169..190
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          296..314
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     CDS             1..634
                     /gene="LOC107910672"
                     /coded_by="XM_016838611.2:270..2174"
                     /db_xref="GeneID:107910672"
ORIGIN      
        1 mlrtivemsk srkrsskwdl keerqyslen vqdsawfana cdresehgsf spefgrngnk
       61 wsaikskhgl pskeylhgsk cgennsdcat nwktttpcdg detysmkksp tlndrrqqnc
      121 hhslksdwsr sqrsrsrsrs rsrsrspvhg igrqpgflem trngsgvstq ickkfmagrc
      181 rrgslchflh qdiqshedgs dnrqkrasvs kyitcnedky yliesgrstd cctdyrkgnc
      241 rrgascrsah dgvsdgfskg sineisrere nnkrnkltsp eqdvereark sssipckyfs
      301 tgnchngnyc rfshpastec drgqwgqssv ssdmlldgae ltdidasfnv dkygnasngs
      361 dadvsnesei pwtgpkwsaa dasidlhnsw agskqsdisv ylgasklnkd tnefsncnid
      421 erwqhgydac gknsesnvhc krididkedl kkienvgvnt gvsepkgaee sivamemspm
      481 wnrrlhssvd kershssept pvgtslrahg kniiekasgh ahdehaasql msieesnfhl
      541 dhmtrgssca vlrsfdhpgp sssslpysnl ntvrqselsf psnevnvkvp qnnlllqeek
      601 psnklnigdt nilhgnygfp stqnmealnr hpiy
//
LOCUS       XP_016694101             623 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694101
VERSION     XP_016694101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838612.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..623
                     /product="vacuolar-sorting receptor 1 isoform X1"
                     /calculated_mol_wt=68982
     Region          48..175
                     /region_name="PA_VSR"
                     /note="Protease-associated (PA) domain-containing plant
                     vacuolar sorting receptor (VSR). This group includes
                     various PA domain-containing VSRs such as garden pea
                     BP-80, pumpkin PV72, and various Arabidopsis VSRs
                     including AtVSR1. In contrast to most eukaryotes; cd02125"
                     /db_xref="CDD:239040"
     Site            128..130
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239040"
     Region          <315..394
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
     Region          514..>545
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(514,517,533)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..623
                     /gene="LOC107910673"
                     /coded_by="XM_016838612.2:444..2315"
                     /db_xref="GeneID:107910673"
ORIGIN      
        1 mrekfgvlic vwimllgncl grfvveensl kvtspgsikg vyecaignfg vpqyggtlvg
       61 tvvypkanqg ackifdefdi sfkskpgglp tfllvnrgdc fftlkawnaq kagaaavlva
      121 dnqdeslitm dtpeeknasa kylqnitips aliskslgds lkkaitfgem vkisldwtes
      181 lphpdervey efwtnsndec gpkcdsqmef vknfkgaaqv leqkgytqfi phyitwycpe
      241 afllskqcks qcinhgryca pdpeqdfskg ydgkdvvvqn lrqacffkva nesrkpwlww
      301 dyvtdfalrc pmkekkytkd cadkviqslg vdltkidkci gdteadeenp vlkaeqdaqi
      361 gkgsrgdvti vptlvinnrq yrgkldkgav lkaicagfqe ttepticlsk dietneclen
      421 nggcwedkta nitacrdtfr grvcecpivn gvkfsgdgyt hceasgalqc efnnggcwre
      481 tqegktysac lddhshgckc ppgfkgdgvn gcedvdecke klacqcpgck ckntwgsyec
      541 scsdgslymr ehdmcinagk ngktevssgf iwaiilglvv agavgyaiyk yrirrymdse
      601 iraimaqymp ldnqpsnihh pdi
//
LOCUS       XP_016694102             621 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting receptor 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694102
VERSION     XP_016694102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838613.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..621
                     /product="vacuolar-sorting receptor 1 isoform X2"
                     /calculated_mol_wt=68827
     Region          48..175
                     /region_name="PA_VSR"
                     /note="Protease-associated (PA) domain-containing plant
                     vacuolar sorting receptor (VSR). This group includes
                     various PA domain-containing VSRs such as garden pea
                     BP-80, pumpkin PV72, and various Arabidopsis VSRs
                     including AtVSR1. In contrast to most eukaryotes; cd02125"
                     /db_xref="CDD:239040"
     Site            128..130
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239040"
     Region          <315..394
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
     Region          514..>545
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(514,517,533)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..621
                     /gene="LOC107910673"
                     /coded_by="XM_016838613.2:452..2317"
                     /db_xref="GeneID:107910673"
ORIGIN      
        1 mrekfgvlic vwimllgncl grfvveensl kvtspgsikg vyecaignfg vpqyggtlvg
       61 tvvypkanqg ackifdefdi sfkskpgglp tfllvnrgdc fftlkawnaq kagaaavlva
      121 dnqdeslitm dtpeeknasa kylqnitips aliskslgds lkkaitfgem vkisldwtes
      181 lphpdervey efwtnsndec gpkcdsqmef vknfkgaaqv leqkgytqfi phyitwycpe
      241 afllskqcks qcinhgryca pdpeqdfskg ydgkdvvvqn lrqacffkva nesrkpwlww
      301 dyvtdfalrc pmkekkytkd cadkviqslg vdltkidkci gdteadeenp vlkaeqdaqi
      361 gkgsrgdvti vptlvinnrq yrgkldkgav lkaicagfqe ttepticlsk dietneclen
      421 nggcwedkta nitacrdtfr grvcecpivn gvkfsgdgyt hceasgalqc efnnggcwre
      481 tqegktysac lddhshgckc ppgfkgdgvn gcedvdecke klacqcpgck ckntwgsyec
      541 scsdgslymr ehdmciskng ktevssgfiw aiilglvvag avgyaiykyr irrymdseir
      601 aimaqympld nqpsnihhpd i
//
LOCUS       XP_016732968             467 aa            linear   PLN 06-AUG-2024
DEFINITION  patellin-4 [Gossypium hirsutum].
ACCESSION   XP_016732968
VERSION     XP_016732968.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016732968.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..467
                     /product="patellin-4"
                     /calculated_mol_wt=52910
     Region          <136..161
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          175..344
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..467
                     /gene="LOC107943697"
                     /coded_by="XM_016877479.2:328..1731"
                     /db_xref="GeneID:107943697"
ORIGIN      
        1 mavedsiaqe qpskvaqeng kvflseptav eksssyrees dflsdlqdfe kkalfelktq
       61 leeailgncl lkkedqpekn dgnvmkaekg deedqpedag eekatqqcee kkfeeinnil
      121 clwgvpllps kgreatdvil lkflrarefk vndafemlkn tlqwrkdgni dsvleeefga
      181 elgsaaymng idkeghpvcy niygvfedee lykktfgtde ngrhflrwrf qlmekgiqkl
      241 dlrpggvtsl lqindlknsp gpsrkelria mkqavgalqd nypeyvarni finvpfwfya
      301 lnallspflt qrskskfvva rpakvtdtll kyipaeevpv qyggfkrend fefsdqdaav
      361 seisikagst vtieipaeev gstsiwelmv lnwevnykae fvpfdqgsyt iivqkskkmv
      421 sqsleagpir ntfinnesgk liltidntss kkkrllyryk tkksssl
//
LOCUS       XP_016693410             364 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693410
VERSION     XP_016693410.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837921.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..364
                     /product="myb family transcription factor PHL8 isoform X1"
                     /calculated_mol_wt=40305
     Region          38..94
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          136..182
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..364
                     /gene="LOC107910148"
                     /coded_by="XM_016837921.2:829..1923"
                     /db_xref="GeneID:107910148"
ORIGIN      
        1 msfsfllppa clsyttqnla lhnmqnqdmn lvlstdakpr lkwtpelhqr fveavnqlgg
       61 pdkatpknlm rvigisgltl yhlkshlqky rlgksqqtei clsdnlddyr eiqsgnkdlt
      121 sdtsdgthkl mnesskiaqa lqmqmevqrk lheqievqrh lqlrieaqgk ylqsvlkkaq
      181 etlagytsss vgvelakael sqlvsmvntg ctssslselt eiggsslkqm erkpmkgtic
      241 sressltsse ssgrtedeep pknenicnrk sntcfvfnfm eiypekkgli sgssnevsgk
      301 krsgtnicdg icvdqpvakr lelpeeetgc glrksgllgs fdlnnqyqnd nesspkaidl
      361 ncke
//
LOCUS       XP_040944502             364 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944502
VERSION     XP_040944502.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088568.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..364
                     /product="myb family transcription factor PHL8 isoform X1"
                     /calculated_mol_wt=40305
     Region          38..94
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          136..182
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..364
                     /gene="LOC107910148"
                     /coded_by="XM_041088568.1:1975..3069"
                     /db_xref="GeneID:107910148"
ORIGIN      
        1 msfsfllppa clsyttqnla lhnmqnqdmn lvlstdakpr lkwtpelhqr fveavnqlgg
       61 pdkatpknlm rvigisgltl yhlkshlqky rlgksqqtei clsdnlddyr eiqsgnkdlt
      121 sdtsdgthkl mnesskiaqa lqmqmevqrk lheqievqrh lqlrieaqgk ylqsvlkkaq
      181 etlagytsss vgvelakael sqlvsmvntg ctssslselt eiggsslkqm erkpmkgtic
      241 sressltsse ssgrtedeep pknenicnrk sntcfvfnfm eiypekkgli sgssnevsgk
      301 krsgtnicdg icvdqpvakr lelpeeetgc glrksgllgs fdlnnqyqnd nesspkaidl
      361 ncke
//
LOCUS       XP_040944503             364 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944503
VERSION     XP_040944503.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088569.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..364
                     /product="myb family transcription factor PHL8 isoform X1"
                     /calculated_mol_wt=40305
     Region          38..94
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          136..182
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..364
                     /gene="LOC107910148"
                     /coded_by="XM_041088569.1:436..1530"
                     /db_xref="GeneID:107910148"
ORIGIN      
        1 msfsfllppa clsyttqnla lhnmqnqdmn lvlstdakpr lkwtpelhqr fveavnqlgg
       61 pdkatpknlm rvigisgltl yhlkshlqky rlgksqqtei clsdnlddyr eiqsgnkdlt
      121 sdtsdgthkl mnesskiaqa lqmqmevqrk lheqievqrh lqlrieaqgk ylqsvlkkaq
      181 etlagytsss vgvelakael sqlvsmvntg ctssslselt eiggsslkqm erkpmkgtic
      241 sressltsse ssgrtedeep pknenicnrk sntcfvfnfm eiypekkgli sgssnevsgk
      301 krsgtnicdg icvdqpvakr lelpeeetgc glrksgllgs fdlnnqyqnd nesspkaidl
      361 ncke
//
LOCUS       XP_016693411             363 aa            linear   PLN 06-AUG-2024
DEFINITION  myb family transcription factor PHL8 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693411
VERSION     XP_016693411.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837922.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..363
                     /product="myb family transcription factor PHL8 isoform X2"
                     /calculated_mol_wt=40204
     Region          38..94
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     Region          135..181
                     /region_name="Myb_CC_LHEQLE"
                     /note="MYB-CC type transfactor, LHEQLE motif; pfam14379"
                     /db_xref="CDD:464160"
     CDS             1..363
                     /gene="LOC107910148"
                     /coded_by="XM_016837922.2:2105..3196"
                     /db_xref="GeneID:107910148"
ORIGIN      
        1 msfsfllppa clsyttqnla lhnmqnqdmn lvlstdakpr lkwtpelhqr fveavnqlgg
       61 pdkatpknlm rvigisgltl yhlkshlqky rlgksqqtei clsdnlddyr eiqsgnkdlt
      121 sdtsdgthkl mndskiaqal qmqmevqrkl heqievqrhl qlrieaqgky lqsvlkkaqe
      181 tlagytsssv gvelakaels qlvsmvntgc tssslselte iggsslkqme rkpmkgtics
      241 ressltsses sgrtedeepp knenicnrks ntcfvfnfme iypekkglis gssnevsgkk
      301 rsgtnicdgi cvdqpvakrl elpeeetgcg lrksgllgsf dlnnqyqndn esspkaidln
      361 cke
//
LOCUS       XP_016691109             256 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc-finger homeodomain protein 11 [Gossypium hirsutum].
ACCESSION   XP_016691109
VERSION     XP_016691109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835620.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="zinc-finger homeodomain protein 11"
                     /calculated_mol_wt=28257
     Region          5..58
                     /region_name="ZF-HD_dimer"
                     /note="ZF-HD protein dimerization region; pfam04770"
                     /db_xref="CDD:398439"
     Region          141..197
                     /region_name="homeo_ZF_HD"
                     /note="homeobox domain, ZF-HD class; TIGR01565"
                     /db_xref="CDD:130628"
     CDS             1..256
                     /gene="LOC107908448"
                     /coded_by="XM_016835620.2:610..1380"
                     /db_xref="GeneID:107908448"
ORIGIN      
        1 mvlsykeclk nhaaslggha ldgcgefmpt psatptdpas fkcaacgchr nfhrrdpydg
       61 pafihrlppp pnrssspspt hspgpsrtpp spvpfsyyss aphmllalst aysgpmdeyh
      121 yhlsnsnpsv srinnnnpsg rkrsrtkftk eqkekmhafa erlgwrmpkg eekliqefcn
      181 evgvnrgvlk vwmhnnkntf skkeilsvgn lnlhdshdnn nniedngnal dsnshmhnne
      241 dsiqlhistn ngssts
//
LOCUS       XP_016694155             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694155
VERSION     XP_016694155.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838666.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22266
     CDS             1..211
                     /gene="LOC107910706"
                     /coded_by="XM_016838666.2:311..946"
                     /db_xref="GeneID:107910706"
ORIGIN      
        1 mdgiflsssa eksvspnkql kniprrhssg ahtsiihggg gglflappps lsfsypfyqa
       61 qhqppllplp lpnkplhtsl psrtpplsss psnlksnryk dqsltppkrs kskqlsgksv
      121 gepkklqtrp tegkkaqgai skpfvmasgg pqaaardler lsssiftlsp ppsslplpsf
      181 slrpklgcka eagggvddga tdnlrrllrl p
//
LOCUS       XP_016691110             848 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691110
VERSION     XP_016691110.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835621.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..848
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=98053
     Region          <172..320
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     Region          608..847
                     /region_name="DUF1666"
                     /note="Protein of unknown function (DUF1666); pfam07891"
                     /db_xref="CDD:462306"
     CDS             1..848
                     /gene="LOC107908449"
                     /coded_by="XM_016835621.2:189..2735"
                     /db_xref="GeneID:107908449"
ORIGIN      
        1 mgreiilali kidsmctirf imlkkthfdf rfgfmhgfly tnmfpvvasf wvflskfiay
       61 vfgsipgylf rpsaikrfae kdsgacsdsn fdgvkerqns dhvdqgnrea dksslvasss
      121 kyeflyrkgf sgfikepkae sysvhefymg sancdgrilv srdsadadig kieveaedpg
      181 esftvekvee nclqvnfvde reteepveei seslmlenvl qkelqpgetd fvlenetees
      241 alrfffekdf ekyikqeesv eekkpeqnii kiedvvkeip kdfveklsek pkhgeietkd
      301 sfkekaqesv eersekdasd iqghgdhved kldyffvidi ekpkkdgeif sprnnvvdve
      361 sithqvlanr ldlsyvltda qnmehgiher tsniirspin dsdeefiele plseklrvmg
      421 edlsiedegd eeefnsmvsp ektqqttlre efifsscdeq eeedndddse fspedddlme
      481 rlkielklar tgglptiled sespkmveql gplkieekyd hkyhiaeiqk vyksysdkmr
      541 kldilnsqtm havsllqlkd pvplssafgr ssapaiksll shnvwpfkqq kpeadpamks
      601 irdlhmafet vyvgqvclsw eilhwqygkv nrlwecdsla thqynqaagk fqrfqvlvqr
      661 fledepfqdr prvenyaknr calrlllqvp vieddcskyk legavsngvl sdmieesmhv
      721 lweflradkd ntnatsktpq qaqvaphdpi dlellmdvrt elqkkekrlk eiqrntncii
      781 krlqrqhqrn lldhtlfiaq velklvsrvl nmlkistdql iwcyeklqri nfgsrkteie
      841 psftlfpc
//
LOCUS       XP_040944504             700 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944504
VERSION     XP_040944504.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088570.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..700
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=80998
     Region          <24..172
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     Region          460..699
                     /region_name="DUF1666"
                     /note="Protein of unknown function (DUF1666); pfam07891"
                     /db_xref="CDD:462306"
     CDS             1..700
                     /gene="LOC107908449"
                     /coded_by="XM_041088570.1:639..2741"
                     /db_xref="GeneID:107908449"
ORIGIN      
        1 mgsancdgri lvsrdsadad igkieveaed pgesftvekv eenclqvnfv dereteepve
       61 eiseslmlen vlqkelqpge tdfvlenete esalrfffek dfekyikqee sveekkpeqn
      121 iikiedvvke ipkdfvekls ekpkhgeiet kdsfkekaqe sveersekda sdiqghgdhv
      181 edkldyffvi diekpkkdge ifsprnnvvd vesithqvla nrldlsyvlt daqnmehgih
      241 ertsniirsp indsdeefie leplseklrv mgedlsiede gdeeefnsmv spektqqttl
      301 reefifsscd eqeeednddd sefspedddl merlkielkl artgglptil edsespkmve
      361 qlgplkieek ydhkyhiaei qkvyksysdk mrkldilnsq tmhavsllql kdpvplssaf
      421 grssapaiks llshnvwpfk qqkpeadpam ksirdlhmaf etvyvgqvcl sweilhwqyg
      481 kvnrlwecds lathqynqaa gkfqrfqvlv qrfledepfq drprvenyak nrcalrlllq
      541 vpvieddcsk yklegavsng vlsdmieesm hvlweflrad kdntnatskt pqqaqvaphd
      601 pidlellmdv rtelqkkekr lkeiqrntnc iikrlqrqhq rnlldhtlfi aqvelklvsr
      661 vlnmlkistd qliwcyeklq rinfgsrkte iepsftlfpc
//
LOCUS       XP_040944505             695 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944505
VERSION     XP_040944505.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088571.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..695
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=80202
     Region          <172..320
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     Region          608..>692
                     /region_name="DUF1666"
                     /note="Protein of unknown function (DUF1666); pfam07891"
                     /db_xref="CDD:462306"
     CDS             1..695
                     /gene="LOC107908449"
                     /coded_by="XM_041088571.1:205..2292"
                     /db_xref="GeneID:107908449"
ORIGIN      
        1 mgreiilali kidsmctirf imlkkthfdf rfgfmhgfly tnmfpvvasf wvflskfiay
       61 vfgsipgylf rpsaikrfae kdsgacsdsn fdgvkerqns dhvdqgnrea dksslvasss
      121 kyeflyrkgf sgfikepkae sysvhefymg sancdgrilv srdsadadig kieveaedpg
      181 esftvekvee nclqvnfvde reteepveei seslmlenvl qkelqpgetd fvlenetees
      241 alrfffekdf ekyikqeesv eekkpeqnii kiedvvkeip kdfveklsek pkhgeietkd
      301 sfkekaqesv eersekdasd iqghgdhved kldyffvidi ekpkkdgeif sprnnvvdve
      361 sithqvlanr ldlsyvltda qnmehgiher tsniirspin dsdeefiele plseklrvmg
      421 edlsiedegd eeefnsmvsp ektqqttlre efifsscdeq eeedndddse fspedddlme
      481 rlkielklar tgglptiled sespkmveql gplkieekyd hkyhiaeiqk vyksysdkmr
      541 kldilnsqtm havsllqlkd pvplssafgr ssapaiksll shnvwpfkqq kpeadpamks
      601 irdlhmafet vyvgqvclsw eilhwqygkv nrlwecdsla thqynqaagk fqrfqvlvqr
      661 fledepfqdr prvenyaknr calrlllqvp vievw
//
LOCUS       XP_016679409             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable aquaporin TIP3-2 [Gossypium hirsutum].
ACCESSION   XP_016679409
VERSION     XP_016679409.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823920.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable aquaporin TIP3-2"
                     /calculated_mol_wt=26982
     Region          1..256
                     /region_name="PLN00027"
                     /note="aquaporin TIP; Provisional"
                     /db_xref="CDD:177664"
     Site            order(65,83..85,194..195,198,201)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(85..87,198..200)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..256
                     /gene="LOC107898442"
                     /coded_by="XM_016823920.2:265..1035"
                     /db_xref="GeneID:107898442"
ORIGIN      
        1 mpprryqfgr adeathpdsm ratlaeflst iifvfagegs ilaldkmykd tsatparlvm
       61 ialahglslf aavassvnvs gghvnpavtf gallcgrisl vralyywiaq llgsivacll
      121 lrltagmrpg gfalasgvge lrglileivl tyglvytvya tgidpkrgsv gtiaplaigl
      181 ivsanilvgg pfdgaamnpa rafgpalvgw rwnhhwiywv gpliggglaa liyeymvipa
      241 aepahpthqp lapedy
//
LOCUS       XP_040944506             275 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944506
VERSION     XP_040944506.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088572.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..275
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31271
     Region          14..101
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..275
                     /gene="LOC121214662"
                     /coded_by="XM_041088572.1:286..1113"
                     /db_xref="GeneID:121214662"
ORIGIN      
        1 mgkgnkegts kqfrwtkpme hvfleilaee arkgnkpsnt fkavsinrvv daiserfqvq
       61 cdakhvenhl rtvknqwqii ckirgesgfg wddnmkmitc dratydaavm ahkkyepfln
      121 ksiidhydem alvvgkdmtt gsfartfadi dlddgnedsm lidcdneeae evrtnvsssg
      181 tskrkrksvq eslideqikf vgeqlgkian alkqftadkt sqlyeqvmsm eeegfdddll
      241 csvfdylvnh esdakaflvk skkhkkiwlq kfsqg
//
LOCUS       XP_016693412             444 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB105 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693412
VERSION     XP_016693412.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837923.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..444
                     /product="transcription factor MYB105 isoform X1"
                     /calculated_mol_wt=49756
     Region          121..>237
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..444
                     /gene="LOC107910150"
                     /coded_by="XM_016837923.2:404..1738"
                     /db_xref="GeneID:107910150"
ORIGIN      
        1 mnrlschsst tpssssssmg mvypdmgcls lapnygivvc ssrenergss gfrfmenskt
       61 rsfeenhssd avegkgsdys dgfgdnnmpi nlnsnlneen pnenavsgke tdsgqsklca
      121 rghwrpaedt klkelvalyg pqnwnliaek legrsgkiva knsgkrksks crlrwfnqld
      181 prinrrafte eeeerlmqah rlygnkwami arlfpgrtdn avknhwhvim arkyrekssa
      241 yrrrklsqsv yrkmeetpni vcrdavtkae pppyclnmsd rrlgiishyq fgifnggdag
      301 gvnggsnvsp hmtsereail sseasyrngf caqaqqppfd ffpdlsndmm gtfsqtrfwd
      361 rpidepqvrg yypqhqhqql hpshmmtmqq seflssqsni estasitpqv saiessssva
      421 gssnyshyet ilppfidflg vgat
//
LOCUS       XP_016693413             432 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB105 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693413
VERSION     XP_016693413.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837924.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..432
                     /product="transcription factor MYB105 isoform X2"
                     /calculated_mol_wt=48458
     Region          121..>225
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..432
                     /gene="LOC107910150"
                     /coded_by="XM_016837924.2:397..1695"
                     /db_xref="GeneID:107910150"
ORIGIN      
        1 mnrlschsst tpssssssmg mvypdmgcls lapnygivvc ssrenergss gfrfmenskt
       61 rsfeenhssd avegkgsdys dgfgdnnmpi nlnsnlneen pnenavsgke tdsgqsklca
      121 rghwrpaedt klkelvalyg pqnwnliaek legrsgkscr lrwfnqldpr inrrafteee
      181 eerlmqahrl ygnkwamiar lfpgrtdnav knhwhvimar kyrekssayr rrklsqsvyr
      241 kmeetpnivc rdavtkaepp pyclnmsdrr lgiishyqfg ifnggdaggv nggsnvsphm
      301 tsereailss easyrngfca qaqqppfdff pdlsndmmgt fsqtrfwdrp idepqvrgyy
      361 pqhqhqqlhp shmmtmqqse flssqsnies tasitpqvsa iessssvags snyshyetil
      421 ppfidflgvg at
//
LOCUS       XP_016693352             286 aa            linear   PLN 06-AUG-2024
DEFINITION  NAC domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_016693352
VERSION     XP_016693352.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837863.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..286
                     /product="NAC domain-containing protein 2"
                     /calculated_mol_wt=33000
     Region          10..134
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..286
                     /gene="LOC107910104"
                     /coded_by="XM_016837863.2:105..965"
                     /db_xref="GeneID:107910104"
ORIGIN      
        1 metktssdlp pgfrfhptde elitfylknq akskpcpvsi ipevdiykfd pwqlpdkaef
       61 gekewyffsp rdrkypngvr pnratvsgyw katgtdkaiy sgskyvgvkk alvfykgkpp
      121 kglktdwimh eyrlndsrkq itkqngsmrl ddwvlcriyk kknsggrgld qqveesntpi
      181 hmtqcsndas etqqmlkfpr tnssvpqlle ldymgpisql lgentynssf dyfpntiasn
      241 ttgdhveklq lqeiryqytd sgklqvneng flnqqvymnp mlyqfq
//
LOCUS       XP_016693350             791 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphate transporter PHO1 homolog 3 [Gossypium hirsutum].
ACCESSION   XP_016693350
VERSION     XP_016693350.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837861.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..791
                     /product="phosphate transporter PHO1 homolog 3"
                     /calculated_mol_wt=91226
     Region          1..341
                     /region_name="SPX"
                     /note="SPX domain; pfam03105"
                     /db_xref="CDD:460807"
     Region          430..765
                     /region_name="EXS"
                     /note="EXS family; pfam03124"
                     /db_xref="CDD:460816"
     CDS             1..791
                     /gene="LOC107910102"
                     /coded_by="XM_016837861.2:357..2732"
                     /db_xref="GeneID:107910102"
ORIGIN      
        1 mkfgkefasq mvpewqeaym dydylktllk elqrfkhrtk ppaapslkrk ltlyrafsgl
       61 tqthhhhnpt spssspddie sqpilvnsvs rdgsqsyett flmsseegge yelvyfrrld
      121 defnkvdkfy rakaqevmke advlnkqmda liafrikven ppgihfdrsv emtrlasdia
      181 asaaalsast psgaksaskr aahleaiees thgqaddddn gdekerntpt leakpakpkp
      241 kvivpaplei ldrvkmnntl etprstikgv lkvpnhtdls fsrenlrkve eqlkrafvef
      301 yqklrllksf sflntlafsk imkkydkits rsasksymkm vdnsylgsse evtklmerve
      361 ttfikhfsna nrskgmsilr pkvkrerhrt tfstgffagc aaslllalil mirarnimds
      421 egrtqymetm fplyslfgfi vlhmlmyain ifywrkyrvn yafifgfkpg telgyrqvll
      481 vsfglgalal asvlanldme mdpktkdyka ftelvplmlv vfifivlflp fnvlyrssrf
      541 flltclfhci caplykvtlp dffladqlts qvqairslef yvcyygwgdf krrentcrds
      601 nvyntfyfvv avlpylarll qclrrlfeek damqglnglk yfltiaavcl rtayslnkgi
      661 awriiawivs aiaaifctyw dlvydwglln rhsknrwlrd kllvphkkvy fgamglnill
      721 rfawlqtvln fqlplhpqtl ttivasleii rrgiwnffrl enehlnnvgk yrafksvplp
      781 fnydedddkd d
//
LOCUS       XP_016693361             509 aa            linear   PLN 06-AUG-2024
DEFINITION  rhamnogalacturonan I rhamnosyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016693361
VERSION     XP_016693361.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837872.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..509
                     /product="rhamnogalacturonan I rhamnosyltransferase 1"
                     /calculated_mol_wt=58688
     Region          96..420
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(104..107,263,265,339..341,383,402..404)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..509
                     /gene="LOC107910113"
                     /coded_by="XM_016837872.2:422..1951"
                     /db_xref="GeneID:107910113"
ORIGIN      
        1 mevrsensiq vrsdkfpstv iprtrlqvwf frvcssillw tclvhivava elwhprlltg
       61 ftsriswitr pplrlqhslh sppplvpsry yrsngflkvs cngglnqmra aicdmvtvar
      121 llnltlvvpe ldkksfwadp sdfedifdvr hfidslrdev rivrrlpkrf sskygfeafq
      181 mppvswssek yyleqilplf skhkvvhfnr tdtrlanngi plalqklrcr vnfqglkftp
      241 qietlghklv rilqekgpfv alhlryemdm lafsgcthgc tveeaeelkr lryaypwwre
      301 keivseerrq qglcpltpee atlvlqalgf tketqiyias geiygserrl aplraafpri
      361 vkketlldpa elqqfqnhss qmaaldfmvt lasntfipty dgnmakvveg hrrylgfkks
      421 ilpdrkklve lldlhqngtl pwndfalavr qahekrmgqp fhrriipdkp keedyfyanp
      481 qeclcegtgc edvldpgksk vtmtageql
//
LOCUS       XP_016693362             488 aa            linear   PLN 06-AUG-2024
DEFINITION  fructose-bisphosphate aldolase-lysine N-methyltransferase,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693362
VERSION     XP_016693362.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837873.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..488
                     /product="fructose-bisphosphate aldolase-lysine
                     N-methyltransferase, chloroplastic"
                     /calculated_mol_wt=54638
     Region          65..303
                     /region_name="SET_RBCMT"
                     /note="SET domain found in chloroplastic ribulose-1,5
                     bisphosphate carboxylase/oxygenase large subunit
                     N-methyltransferase (RBCMT) and similar proteins; cd19179"
                     /db_xref="CDD:380956"
     Site            order(82..83,222..223,240..244,287,300..302)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380956"
     Site            order(82..83,100,220..225,240..244,254,285..288)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380956"
     Region          319..445
                     /region_name="Rubis-subs-bind"
                     /note="Rubisco LSMT substrate-binding; pfam09273"
                     /db_xref="CDD:462737"
     CDS             1..488
                     /gene="LOC107910114"
                     /coded_by="XM_016837873.2:127..1593"
                     /db_xref="GeneID:107910114"
ORIGIN      
        1 mapslstlss psstfpssst tlkpfssfst kptlsihfvk rpisvsatad pppqlqtfwq
       61 wlqdqgvvsa kspvrpgmvp eglgliakkn isrnevvlei pnrfwinqea vaaseigtvc
      121 sglkpwvsva lflirerfrq dsqwrvyldi lpeltdstvf wseeelaevq gtqllsttlg
      181 vkeyvqnefl kveeeiilpn kqlfpapits ddffwafgil rsrafsrlrg qnlvliplad
      241 linhspnitt edyaweikga glfsrdllfs lrspvsvkag eqvliqydld ksnaelaldy
      301 gfiesksern aytltleise sdpffgdkld iaetnglget ayfdivlgrp lppalipylr
      361 lvalggtdaf llesifrnti wghlglpvsr aneelicrvi rdacksalsg yhtaieedek
      421 lmedenldsr lkiavgirag ekkvlqqide ifkgreseld eleyyqerrl kdlglvgeqg
      481 eiifwetn
//
LOCUS       XP_016693363             430 aa            linear   PLN 06-AUG-2024
DEFINITION  integrin-linked protein kinase 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693363
VERSION     XP_016693363.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837874.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..430
                     /product="integrin-linked protein kinase 1 isoform X1"
                     /calculated_mol_wt=48362
     Region          33..60
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <34..>119
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(34..35,38..40,42..43,47,51,60,62,64,68..69,72..74,
                     76..77,81,84,93,95,97,101..102,105..107,109..110,114,117)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          62..93
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          95..119
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          160..412
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(160..164,168,179,181,213,229..232,236,238,277,279,
                     281..282,284,297,300,320..323)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(160..164,168,179,181,213,229..232,236,277,279,
                     281..282,284,297)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(164,236,238,277,279,281,300,320..323)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(296..304,319..323)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..430
                     /gene="LOC107910115"
                     /coded_by="XM_016837874.2:213..1505"
                     /db_xref="GeneID:107910115"
ORIGIN      
        1 msssksggep sargstssdr qkekarlsrt sqilwhahqn dasavrkllq edrslvnard
       61 ydnrtplhva slhgwidvat cllefgadvn sqdrwrntpl adaegakkhe miellksygg
      121 lsygqngshf epkpvppplp nkcdwevdps eldfsnsnii gkgsfgeilr aswrgtpvav
      181 krilpslsdd rlviqdfrhe vnllvklrhp nvvqflgavt dkkplmlite ylrggdlhqy
      241 lkeknglnss aainfaldia rgmaylhnep nviihrdlkp rnvllvnssa dhlkvgdfgl
      301 sklikvqnsh dvykmtgetg syrymapevf khrkydkkvd vfsfamilye miegeppfsn
      361 hepyeaaklv aeghrpnfrs ksflpelrdl tgkcwasdmn qrpsfleilk rlekikgnap
      421 sdshwnifgs
//
LOCUS       XP_016693364             389 aa            linear   PLN 06-AUG-2024
DEFINITION  integrin-linked protein kinase 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693364
VERSION     XP_016693364.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837875.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..389
                     /product="integrin-linked protein kinase 1 isoform X2"
                     /calculated_mol_wt=43718
     Region          33..60
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <34..>119
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(34..35,38..40,42..43,47,51,60,62,64,68..69,72..74,
                     76..77,81,84,93,95,97,101..102,105..107,109..110,114,117)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          62..93
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          95..119
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          160..389
                     /region_name="STKc_MAP3K-like"
                     /note="Catalytic domain of Mitogen-Activated Protein
                     Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases;
                     cd13999"
                     /db_xref="CDD:270901"
     Site            order(160..164,168,179,181,213,229..232,236,238,277,279,
                     281..282,284,297,300,320..323)
                     /site_type="active"
                     /db_xref="CDD:270901"
     Site            order(160..164,168,179,181,213,229..232,236,277,279,
                     281..282,284,297)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270901"
     Site            order(164,236,238,277,279,281,300,320..323)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270901"
     Site            order(296..304,319..323)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270901"
     CDS             1..389
                     /gene="LOC107910115"
                     /coded_by="XM_016837875.2:213..1382"
                     /db_xref="GeneID:107910115"
ORIGIN      
        1 msssksggep sargstssdr qkekarlsrt sqilwhahqn dasavrkllq edrslvnard
       61 ydnrtplhva slhgwidvat cllefgadvn sqdrwrntpl adaegakkhe miellksygg
      121 lsygqngshf epkpvppplp nkcdwevdps eldfsnsnii gkgsfgeilr aswrgtpvav
      181 krilpslsdd rlviqdfrhe vnllvklrhp nvvqflgavt dkkplmlite ylrggdlhqy
      241 lkeknglnss aainfaldia rgmaylhnep nviihrdlkp rnvllvnssa dhlkvgdfgl
      301 sklikvqnsh dvykmtgetg syrymapevf khrkydkkvd vfsfamilye miegeppfsn
      361 hepyeaaklv aeghrpnfrs ksflpelre
//
LOCUS       XP_040944507             222 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24delta9 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944507
VERSION     XP_040944507.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088573.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="transmembrane emp24 domain-containing protein
                     p24delta9 isoform X1"
                     /calculated_mol_wt=25895
     Region          21..217
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..222
                     /gene="LOC107910117"
                     /coded_by="XM_041088573.1:85..753"
                     /db_xref="GeneID:107910117"
ORIGIN      
        1 mmmigwmvlv vgvllvpssq slrfdiqsgk ikcisedmks nsmtvgkyqv inpnqdrhql
       61 lpdshklnvk vtsshghifq waekvekgqf vftameqgny macfsapehw plitltidfd
      121 wrtgvqfkdw fnvakkghvd alwlfcelqa mkveleqlyh tinsiheemf yfrarekemq
      181 qlnqetiskm mwlsfvslcf gfsvaglqfw ylksffqenk li
//
LOCUS       XP_016693365             213 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane emp24 domain-containing protein p24delta9 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693365
VERSION     XP_016693365.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837876.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..213
                     /product="transmembrane emp24 domain-containing protein
                     p24delta9 isoform X2"
                     /calculated_mol_wt=24791
     Region          21..208
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..213
                     /gene="LOC107910117"
                     /coded_by="XM_016837876.2:85..726"
                     /db_xref="GeneID:107910117"
ORIGIN      
        1 mmmigwmvlv vgvllvpssq slrfdiqsgk ikcisedmks nsmtvgkyqv inpnqdrhql
       61 lpdshklnvk vtsshghifq waekvekgqf vftameqgny macfsapehw plitltidfd
      121 wrtgvqfkdw fnvakkghvd amkveleqly htinsiheem fyfrarekem qqlnqetisk
      181 mmwlsfvslc fgfsvaglqf wylksffqen kli
//
LOCUS       XP_040944508             169 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H3.v1 [Gossypium hirsutum].
ACCESSION   XP_040944508
VERSION     XP_040944508.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088574.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..169
                     /product="histone H3.v1"
                     /calculated_mol_wt=18764
     CDS             1..169
                     /gene="LOC107908312"
                     /coded_by="XM_041088574.1:15..524"
                     /db_xref="GeneID:107908312"
ORIGIN      
        1 mdegessdgl seweliqapa ystplitpla eqhmvatatt kdnspqhqhh lsvlppsrhv
       61 gleeeeeeee eeeeeeeeee eeeeeeeeee eeeeevvnss atswsmikgd genswplknt
      121 saigkiltng alklaarvgy yvgfgwgvws gnivvatmll sflyakarv
//
LOCUS       XP_016693366             346 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693366
VERSION     XP_016693366.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837877.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38461
     CDS             1..346
                     /gene="LOC107910118"
                     /coded_by="XM_016837877.2:377..1417"
                     /db_xref="GeneID:107910118"
ORIGIN      
        1 meistvtspr mrsdhleker lkethhgqsf elqsshdath pnhrfhstsv leilretvri
       61 lryncsgfmi ilallicpvs avlmssnllv gesivntltv rlllvaktsg vpfrpfikqs
      121 cqhlvetavs svtcfpllit fsllskaavv ycvdstylke sadvskffvi irtlwrqlvs
      181 sylwmcmviv gcvttfiifl lvacsvlsvl gfspdiivfa mimvglvfai vfanvvvvcd
      241 mgivmcvlee vwgvqalvra gvlikgqtqv glliflvsti gltfveglfk hrvqtlsygd
      301 gssriwegpl lvimysfvvl vhsmmntvfy fscksytsdd hqsmlf
//
LOCUS       XP_016693367             346 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693367
VERSION     XP_016693367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837878.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38461
     CDS             1..346
                     /gene="LOC107910118"
                     /coded_by="XM_016837878.2:374..1414"
                     /db_xref="GeneID:107910118"
ORIGIN      
        1 meistvtspr mrsdhleker lkethhgqsf elqsshdath pnhrfhstsv leilretvri
       61 lryncsgfmi ilallicpvs avlmssnllv gesivntltv rlllvaktsg vpfrpfikqs
      121 cqhlvetavs svtcfpllit fsllskaavv ycvdstylke sadvskffvi irtlwrqlvs
      181 sylwmcmviv gcvttfiifl lvacsvlsvl gfspdiivfa mimvglvfai vfanvvvvcd
      241 mgivmcvlee vwgvqalvra gvlikgqtqv glliflvsti gltfveglfk hrvqtlsygd
      301 gssriwegpl lvimysfvvl vhsmmntvfy fscksytsdd hqsmlf
//
LOCUS       XP_016693368             338 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693368
VERSION     XP_016693368.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837879.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="uncharacterized protein"
                     /calculated_mol_wt=38123
     CDS             1..338
                     /gene="LOC107910119"
                     /coded_by="XM_016837879.2:126..1142"
                     /db_xref="GeneID:107910119"
ORIGIN      
        1 mttrptpppv hidlwpilse skriinahsr hflalsvlfl lplsfsfsaf pfinqlfsqs
       61 stptiethls flhtpfqlqk pptipinyll ftllytlfif ifslfatgsi tysvfhgfyg
      121 rpvkllsaik saftsffplv stclvtelii sgillilali flgllqltql lgfhvdytsp
      181 yfislclvfv itflfivlyl qvkwvfayvv vvvesswgle plkrsknlvh glkriafsml
      241 lfygffsgil iwvsaadwgy aaadkwkswa fvihivstst lfmlimlsyl aattvfymys
      301 kaihgelage iaeefareyv slpfddgkvp hvvsvvyg
//
LOCUS       XP_016693370             790 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g69350,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693370
VERSION     XP_016693370.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837881.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..790
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g69350, mitochondrial"
                     /calculated_mol_wt=88670
     Region          67..94
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          104..776
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          106..130
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          140..162
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          169..196
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          202..231
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..297
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          303..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          346..368
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          372..399
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..468
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          472..499
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          505..534
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          544..569
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          573..600
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          606..635
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          641..667
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..790
                     /gene="LOC107910120"
                     /coded_by="XM_016837881.2:124..2496"
                     /db_xref="GeneID:107910120"
ORIGIN      
        1 mttlymplfr sctnlrslaq lhahllvtgf hhdplpstkl iesysqmgsf qssklvfrcf
       61 pnpdsfmwgv likcsvwsnl fqdaiflylt mikndqlhis nfifpsllra csgfgdlgig
      121 emvhgtiiks gfgkdtviqs sllsmygemg clsyakkmfd emtirdlvsw ssiilsyven
      181 gkaneglemf rlmvlegirp dsitmlsvae acgdlgflkl arlihgyivr rrieidgsla
      241 sslvamyskc gdldsaerif lnvtnrstal wtamissyyr tgrfaealks ffdmldsrve
      301 pnsvtmmsvl esfaglgwlr egksvhcyii rkemdleydv lgpvfielym kcgklnycdk
      361 vlhvvggrni vawnmiisic tekgllkeal ahlvqmqtlg lmpdsfslas sisacadggl
      421 llfgdqlhgh iikrglsdef vqnslidmys kcgltelayt ifddineksv vtwnsmicgf
      481 hqngnsveai slfdqmylng lemndvtfls vlqacsnlgy lekgkwlhhk lltygvktdl
      541 yidtaltdmy akcgdlvtaq rvfdsmseks vvswtvmiag ygahgrvnaa islfnqmves
      601 girpnqvtfm nilsacshag svedgksyfk smrdfgvepn sehyacmvdl lsrggdlnea
      661 yrniksmpyp adasiwsall ngcrihqrmd miksieedlv dihtddtgyy tllsniygee
      721 gnwkefekvr slmkgiglrk vpgyslield kriyrfgvgf tsllqteetf sflenfqila
      781 qehvfylenq
//
LOCUS       XP_016691008             278 aa            linear   PLN 06-AUG-2024
DEFINITION  xylan glycosyltransferase MUCI21-like [Gossypium hirsutum].
ACCESSION   XP_016691008
VERSION     XP_016691008.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835519.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691008.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..278
                     /product="xylan glycosyltransferase MUCI21-like"
                     /calculated_mol_wt=30978
     Region          <151..233
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; pfam04577"
                     /db_xref="CDD:428020"
     CDS             1..278
                     /gene="LOC107908313"
                     /coded_by="XM_016835519.2:407..1243"
                     /db_xref="GeneID:107908313"
ORIGIN      
        1 mgefsnaknp kltitsgpsg pecevqhnsp aivfsaggyt gnvfhdfndg fiplfitins
       61 iyknqdvvlv vskardwwln ryknllhvfs shpivtldnd tsnhcfpsat lglmsygfma
      121 lmpnssqtll hfrglldkaf ghhgqysifn pppksdsppr lvfmsrskgi greilnqdea
      181 vkvakeigfd vilfkptgki slqqayglin sshamvgmhg aalthslflr pgsafmqvmp
      241 lgidwvgkmc fgepystlni rlrwkrvaww rsttrmiw
//
LOCUS       XP_040944509             237 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-2, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944509
VERSION     XP_040944509.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088575.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="ferrochelatase-2, chloroplastic isoform X1"
                     /calculated_mol_wt=26510
     Region          2..>122
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          113..>187
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..237
                     /gene="LOC107910123"
                     /coded_by="XM_041088575.1:895..1608"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd vqpflynlfa dldiirlpgl fkllqrplak lisvlrapks
       61 eegyaaiggg splrkitdeq analrmalea nnvnvsvyvg mrywysftee vieqvdtlld
      121 gikwddkgla vaiaqnvdtg ailmqgfvnr galattitsr kamffsrsra tlwtkgetsn
      181 nfiniydkrr nklcvqfswr gfllghvrll lvklleiqeq igssnikmsi irfeank
//
LOCUS       XP_040944510             237 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-2, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944510
VERSION     XP_040944510.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088576.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="ferrochelatase-2, chloroplastic isoform X1"
                     /calculated_mol_wt=26510
     Region          2..>122
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          113..>187
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..237
                     /gene="LOC107910123"
                     /coded_by="XM_041088576.1:738..1451"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd vqpflynlfa dldiirlpgl fkllqrplak lisvlrapks
       61 eegyaaiggg splrkitdeq analrmalea nnvnvsvyvg mrywysftee vieqvdtlld
      121 gikwddkgla vaiaqnvdtg ailmqgfvnr galattitsr kamffsrsra tlwtkgetsn
      181 nfiniydkrr nklcvqfswr gfllghvrll lvklleiqeq igssnikmsi irfeank
//
LOCUS       XP_040944511             237 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-2, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944511
VERSION     XP_040944511.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088577.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="ferrochelatase-2, chloroplastic isoform X1"
                     /calculated_mol_wt=26510
     Region          2..>122
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          113..>187
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..237
                     /gene="LOC107910123"
                     /coded_by="XM_041088577.1:657..1370"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd vqpflynlfa dldiirlpgl fkllqrplak lisvlrapks
       61 eegyaaiggg splrkitdeq analrmalea nnvnvsvyvg mrywysftee vieqvdtlld
      121 gikwddkgla vaiaqnvdtg ailmqgfvnr galattitsr kamffsrsra tlwtkgetsn
      181 nfiniydkrr nklcvqfswr gfllghvrll lvklleiqeq igssnikmsi irfeank
//
LOCUS       XP_040944512             237 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-2, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944512
VERSION     XP_040944512.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088578.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="ferrochelatase-2, chloroplastic isoform X1"
                     /calculated_mol_wt=26510
     Region          2..>122
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          113..>187
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..237
                     /gene="LOC107910123"
                     /coded_by="XM_041088578.1:466..1179"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd vqpflynlfa dldiirlpgl fkllqrplak lisvlrapks
       61 eegyaaiggg splrkitdeq analrmalea nnvnvsvyvg mrywysftee vieqvdtlld
      121 gikwddkgla vaiaqnvdtg ailmqgfvnr galattitsr kamffsrsra tlwtkgetsn
      181 nfiniydkrr nklcvqfswr gfllghvrll lvklleiqeq igssnikmsi irfeank
//
LOCUS       XP_040944513             225 aa            linear   PLN 06-AUG-2024
DEFINITION  coproporphyrin III ferrochelatase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944513
VERSION     XP_040944513.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088579.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="coproporphyrin III ferrochelatase isoform X2"
                     /calculated_mol_wt=25088
     Region          2..>110
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          101..>175
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..225
                     /gene="LOC107910123"
                     /coded_by="XM_041088579.1:895..1572"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd diirlpglfk llqrplakli svlrapksee gyaaigggsp
       61 lrkitdeqan alrmaleann vnvsvyvgmr ywysfteevi eqvdtlldgi kwddkglava
      121 iaqnvdtgai lmqgfvnrga lattitsrka mffsrsratl wtkgetsnnf iniydkrrnk
      181 lcvqfswrgf llghvrlllv klleiqeqig ssnikmsiir feank
//
LOCUS       XP_040944514             225 aa            linear   PLN 06-AUG-2024
DEFINITION  coproporphyrin III ferrochelatase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944514
VERSION     XP_040944514.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088580.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="coproporphyrin III ferrochelatase isoform X2"
                     /calculated_mol_wt=25088
     Region          2..>110
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          101..>175
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..225
                     /gene="LOC107910123"
                     /coded_by="XM_041088580.1:657..1334"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd diirlpglfk llqrplakli svlrapksee gyaaigggsp
       61 lrkitdeqan alrmaleann vnvsvyvgmr ywysfteevi eqvdtlldgi kwddkglava
      121 iaqnvdtgai lmqgfvnrga lattitsrka mffsrsratl wtkgetsnnf iniydkrrnk
      181 lcvqfswrgf llghvrlllv klleiqeqig ssnikmsiir feank
//
LOCUS       XP_040944515             225 aa            linear   PLN 06-AUG-2024
DEFINITION  coproporphyrin III ferrochelatase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944515
VERSION     XP_040944515.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088581.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="coproporphyrin III ferrochelatase isoform X2"
                     /calculated_mol_wt=25088
     Region          2..>110
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          101..>175
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..225
                     /gene="LOC107910123"
                     /coded_by="XM_041088581.1:737..1414"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd diirlpglfk llqrplakli svlrapksee gyaaigggsp
       61 lrkitdeqan alrmaleann vnvsvyvgmr ywysfteevi eqvdtlldgi kwddkglava
      121 iaqnvdtgai lmqgfvnrga lattitsrka mffsrsratl wtkgetsnnf iniydkrrnk
      181 lcvqfswrgf llghvrlllv klleiqeqig ssnikmsiir feank
//
LOCUS       XP_040944516             225 aa            linear   PLN 06-AUG-2024
DEFINITION  coproporphyrin III ferrochelatase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944516
VERSION     XP_040944516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088582.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="coproporphyrin III ferrochelatase isoform X2"
                     /calculated_mol_wt=25088
     Region          2..>110
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     Region          101..>175
                     /region_name="PLN02346"
                     /note="histidine biosynthesis bifunctional protein hisIE"
                     /db_xref="CDD:215196"
     CDS             1..225
                     /gene="LOC107910123"
                     /coded_by="XM_041088582.1:466..1143"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd diirlpglfk llqrplakli svlrapksee gyaaigggsp
       61 lrkitdeqan alrmaleann vnvsvyvgmr ywysfteevi eqvdtlldgi kwddkglava
      121 iaqnvdtgai lmqgfvnrga lattitsrka mffsrsratl wtkgetsnnf iniydkrrnk
      181 lcvqfswrgf llghvrlllv klleiqeqig ssnikmsiir feank
//
LOCUS       XP_040944517             140 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-1, chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944517
VERSION     XP_040944517.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088583.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..140
                     /product="ferrochelatase-1, chloroplastic isoform X3"
                     /calculated_mol_wt=15606
     Region          2..>138
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     CDS             1..140
                     /gene="LOC107910123"
                     /coded_by="XM_041088583.1:468..890"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd vqpflynlfa dldiirlpgl fkllqrplak lisvlrapks
       61 eegyaaiggg splrkitdeq analrmalea nnvnvsvyvg mrywysftee vieqikldri
      121 kklvvlplyp qfsisttgrd
//
LOCUS       XP_040944518             128 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-1, chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944518
VERSION     XP_040944518.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088584.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="ferrochelatase-1, chloroplastic isoform X4"
                     /calculated_mol_wt=14185
     Region          2..>126
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     CDS             1..128
                     /gene="LOC107910123"
                     /coded_by="XM_041088584.1:900..1286"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd diirlpglfk llqrplakli svlrapksee gyaaigggsp
       61 lrkitdeqan alrmaleann vnvsvyvgmr ywysfteevi eqikldrikk lvvlplypqf
      121 sisttgrd
//
LOCUS       XP_040944519             128 aa            linear   PLN 06-AUG-2024
DEFINITION  ferrochelatase-1, chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944519
VERSION     XP_040944519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088585.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="ferrochelatase-1, chloroplastic isoform X4"
                     /calculated_mol_wt=14185
     Region          2..>126
                     /region_name="PLN02449"
                     /note="ferrochelatase"
                     /db_xref="CDD:178068"
     CDS             1..128
                     /gene="LOC107910123"
                     /coded_by="XM_041088585.1:739..1125"
                     /db_xref="GeneID:107910123"
ORIGIN      
        1 meekigvlll nlggpetlkd diirlpglfk llqrplakli svlrapksee gyaaigggsp
       61 lrkitdeqan alrmaleann vnvsvyvgmr ywysfteevi eqikldrikk lvvlplypqf
      121 sisttgrd
//
LOCUS       XP_016693377             159 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 5A-2 [Gossypium hirsutum].
ACCESSION   XP_016693377
VERSION     XP_016693377.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837888.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="eukaryotic translation initiation factor 5A-2"
                     /calculated_mol_wt=17253
     Region          1..159
                     /region_name="PLN03107"
                     /note="eukaryotic translation initiation factor 5A;
                     Provisional"
                     /db_xref="CDD:215580"
     CDS             1..159
                     /gene="LOC107910125"
                     /coded_by="XM_016837888.2:268..747"
                     /db_xref="GeneID:107910125"
ORIGIN      
        1 msdeehhfes kadagaskty pqqagtirkn gyivikgrpc kvvevstskt gkhghakchf
       61 vgidiftgkk ledilpsshn cdvphvnrtd yqlidisedg fvslltengn tkddlrlptd
      121 dnlltqikdg faegkdlvvs vmsamgeeqi cglkdigpk
//
LOCUS       XP_016693378             124 aa            linear   PLN 06-AUG-2024
DEFINITION  nodulin-related protein 1 [Gossypium hirsutum].
ACCESSION   XP_016693378
VERSION     XP_016693378.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837889.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..124
                     /product="nodulin-related protein 1"
                     /calculated_mol_wt=12613
     CDS             1..124
                     /gene="LOC107910126"
                     /coded_by="XM_016837889.2:1..375"
                     /db_xref="GeneID:107910126"
ORIGIN      
        1 maserdpkpg tsellssakl vadaakstfn kesdkvdkgk vagagadllg agqhygkldk
       61 dkgvgqyvek vetylhqyqt shsapttnpd shgtgaaakd setapagggg vgdymkmaqg
      121 flgk
//
LOCUS       XP_016693379             284 aa            linear   PLN 06-AUG-2024
DEFINITION  remorin 1.4 [Gossypium hirsutum].
ACCESSION   XP_016693379
VERSION     XP_016693379.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837890.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..284
                     /product="remorin 1.4"
                     /calculated_mol_wt=31351
     Region          177..278
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..284
                     /gene="LOC107910127"
                     /coded_by="XM_016837890.2:322..1176"
                     /db_xref="GeneID:107910127"
ORIGIN      
        1 mtswnhdsny iteqvvgvaa aayvitsiae tssikdknrk egptfstwkp givsaqfsge
       61 gskkvpdsad ikvpvpnakd ekatrhgssf rrpaiftdnv gsssrtepgs srkpdtlssq
      121 peraapkper atskpdhhai kpgtpatrpe lppipkpvpp vvepkrqhtv rpgsdqakad
      181 awekaemaki kdryvklnnt ileweekkkk karskldkae ksesekkrar altkfrnemd
      241 yikqvadgar aqanarqrnd elkakekani irttgelpmt cfcc
//
LOCUS       XP_040944520             284 aa            linear   PLN 06-AUG-2024
DEFINITION  remorin 1.4 [Gossypium hirsutum].
ACCESSION   XP_040944520
VERSION     XP_040944520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088586.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..284
                     /product="remorin 1.4"
                     /calculated_mol_wt=31351
     Region          177..278
                     /region_name="Remorin_C"
                     /note="Remorin, C-terminal region; pfam03763"
                     /db_xref="CDD:427493"
     CDS             1..284
                     /gene="LOC107910127"
                     /coded_by="XM_041088586.1:151..1005"
                     /db_xref="GeneID:107910127"
ORIGIN      
        1 mtswnhdsny iteqvvgvaa aayvitsiae tssikdknrk egptfstwkp givsaqfsge
       61 gskkvpdsad ikvpvpnakd ekatrhgssf rrpaiftdnv gsssrtepgs srkpdtlssq
      121 peraapkper atskpdhhai kpgtpatrpe lppipkpvpp vvepkrqhtv rpgsdqakad
      181 awekaemaki kdryvklnnt ileweekkkk karskldkae ksesekkrar altkfrnemd
      241 yikqvadgar aqanarqrnd elkakekani irttgelpmt cfcc
//
LOCUS       XP_016693380             263 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693380
VERSION     XP_016693380.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837891.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..263
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29562
     Region          42..98
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(44,47,63,65,68,71,95,98)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..263
                     /gene="LOC107910128"
                     /coded_by="XM_016837891.2:329..1120"
                     /db_xref="GeneID:107910128"
ORIGIN      
        1 mwsfasntia siglksskea nqacsecsdd elcsngsrde glecpicwep fnivenvpyv
       61 lwcghtlcqn cilglqpavl klptqqikip mfiscpwchl islrlvykgn lkfprknffi
      121 lwmieslngd rygisrrnls gdnqpvgslr cnlmlgnqai sgvvrrgsya nlseqnrsld
      181 tggrnnaerh hfslhksldf fihftskfpl viifllvvff aipgsavill lyflvtvvfa
      241 ipsflvlyfa fpmldrlvre its
//
LOCUS       XP_016693381             263 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693381
VERSION     XP_016693381.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837892.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..263
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29562
     Region          42..98
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(44,47,63,65,68,71,95,98)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..263
                     /gene="LOC107910128"
                     /coded_by="XM_016837892.2:216..1007"
                     /db_xref="GeneID:107910128"
ORIGIN      
        1 mwsfasntia siglksskea nqacsecsdd elcsngsrde glecpicwep fnivenvpyv
       61 lwcghtlcqn cilglqpavl klptqqikip mfiscpwchl islrlvykgn lkfprknffi
      121 lwmieslngd rygisrrnls gdnqpvgslr cnlmlgnqai sgvvrrgsya nlseqnrsld
      181 tggrnnaerh hfslhksldf fihftskfpl viifllvvff aipgsavill lyflvtvvfa
      241 ipsflvlyfa fpmldrlvre its
//
LOCUS       XP_016693383             525 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At5g66520 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693383
VERSION     XP_016693383.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837894.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..525
                     /product="pentatricopeptide repeat-containing protein
                     At5g66520 isoform X1"
                     /calculated_mol_wt=58879
     Region          72..99
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <74..522
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          144..168
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          171..202
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          204..231
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          237..266
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          276..301
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          303..332
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          338..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          374..403
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          412..443
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          446..472
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..525
                     /gene="LOC107910130"
                     /coded_by="XM_016837894.2:146..1723"
                     /db_xref="GeneID:107910130"
ORIGIN      
        1 msssskrclt llekcknmkq lkqahaqaft sglrtnsfal srllafcanp nhgsltyawn
       61 lfthiqdpti cicntlikaf flkgetfktl qfysnmlskg mspdnytlpf vlkacaklqf
      121 fhfgelvygh clklgfvfdi fvgnalismf cgfdnvkvar yifddipgld vvswtvmisg
      181 ygqmgdidta rllfdeapvk drgiwgamis gyvknncfke glymfrlmqm sdtepdeaif
      241 vsilsacahl galdtgiwih kymdqqkfpl tlrlrtclvd myakcgnlgi akklfdemqq
      301 rdvvswnvmi sgmamhgdgg saiqlfrqme kdgvrpddit fialfsacsy sglafeglri
      361 ldrmcnvyki epksehfgci idllirgglf eeanqiiqrm pdssnpsdea iawrallrsy
      421 csrgqtklae vaaeklmrle dhsgvyvlls nlyassgkhy dakrikqmmk srgvnkapgc
      481 ssikingeah efiagekshl qmdeihlile kldeqlhhag lspys
//
LOCUS       XP_016693384             439 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g31430 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693384
VERSION     XP_016693384.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837895.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..439
                     /product="pentatricopeptide repeat-containing protein
                     At1g31430 isoform X2"
                     /calculated_mol_wt=48983
     Region          <24..436
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          58..82
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          85..116
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          118..145
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          151..180
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          190..215
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          217..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          252..278
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          288..317
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          326..353
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          356..386
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..439
                     /gene="LOC107910130"
                     /coded_by="XM_016837895.2:220..1539"
                     /db_xref="GeneID:107910130"
ORIGIN      
        1 mpgtsshtfr tppfvsatps sklsfskaca klqffhfgel vyghclklgf vfdifvgnal
       61 ismfcgfdnv kvaryifddi pgldvvswtv misgygqmgd idtarllfde apvkdrgiwg
      121 amisgyvknn cfkeglymfr lmqmsdtepd eaifvsilsa cahlgaldtg iwihkymdqq
      181 kfpltlrlrt clvdmyakcg nlgiakklfd emqqrdvvsw nvmisgmamh gdggsaiqlf
      241 rqmekdgvrp dditfialfs acsysglafe glrildrmcn vykiepkseh fgciidllir
      301 gglfeeanqi iqrmpdssnp sdeaiawral lrsycsrgqt klaevaaekl mrledhsgvy
      361 vllsnlyass gkhydakrik qmmksrgvnk apgcssikin geahefiage kshlqmdeih
      421 lilekldeql hhaglspys
//
LOCUS       XP_016693385             433 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g15930
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693385
VERSION     XP_016693385.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837896.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..433
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g15930 isoform X3"
                     /calculated_mol_wt=48460
     Region          70..110
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <85..430
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          112..139
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          145..174
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          184..209
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          211..240
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          246..272
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          282..311
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          320..347
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          350..380
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..433
                     /gene="LOC107910130"
                     /coded_by="XM_016837896.2:146..1447"
                     /db_xref="GeneID:107910130"
ORIGIN      
        1 msssskrclt llekcknmkq lkqahaqaft sglrtnsfal srllafcanp nhgsltyawn
       61 lfthiqdpti cicntlikaf flkvmisgyg qmgdidtarl lfdeapvkdr giwgamisgy
      121 vknncfkegl ymfrlmqmsd tepdeaifvs ilsacahlga ldtgiwihky mdqqkfpltl
      181 rlrtclvdmy akcgnlgiak klfdemqqrd vvswnvmisg mamhgdggsa iqlfrqmekd
      241 gvrpdditfi alfsacsysg lafeglrild rmcnvykiep ksehfgciid llirgglfee
      301 anqiiqrmpd ssnpsdeaia wrallrsycs rgqtklaeva aeklmrledh sgvyvllsnl
      361 yassgkhyda krikqmmksr gvnkapgcss ikingeahef iagekshlqm deihlilekl
      421 deqlhhagls pys
//
LOCUS       XP_016693386             324 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At1g35710
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693386
VERSION     XP_016693386.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837897.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At1g35710 isoform X1"
                     /calculated_mol_wt=36403
     Region          83..>316
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          193..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..324
                     /gene="LOC107910131"
                     /coded_by="XM_016837897.2:144..1118"
                     /db_xref="GeneID:107910131"
ORIGIN      
        1 maplftllil ffpvlnlsfc ktlkrdvkal neikaslgwr vvyawvgddp cgdgnlppws
       61 gitctlmgdy rvvtelevya vsivgpfpvp vtnlfdltrl dmhnnkltgp ippqigrlkr
      121 lkilnlrwnk lqdvlpseig elkslthlyl sfnnfkgeip kelaslpelr ylhlhqnrfs
      181 gripaelgtl eklqhldvgn nhlvgtikql ismygcfpsl rnlylnnnyl tggfpakiag
      241 ltnleilyls ynklsgviph eiihlprlts lhldhnqfag ripealyrhp flkemyiagn
      301 sfqkgaksig vpkilelads eflv
//
LOCUS       XP_016693387             300 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At1g35710
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693387
VERSION     XP_016693387.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..300
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At1g35710 isoform X2"
                     /calculated_mol_wt=33617
     Region          83..>277
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..300
                     /gene="LOC107910131"
                     /coded_by="XM_016837898.2:144..1046"
                     /db_xref="GeneID:107910131"
ORIGIN      
        1 maplftllil ffpvlnlsfc ktlkrdvkal neikaslgwr vvyawvgddp cgdgnlppws
       61 gitctlmgdy rvvtelevya vsivgpfpvp vtnlfdltrl dmhnnkltgp ippqigrlkr
      121 lkilylsfnn fkgeipkela slpelrylhl hqnrfsgrip aelgtleklq hldvgnnhlv
      181 gtikqlismy gcfpslrnly lnnnyltggf pakiagltnl eilylsynkl sgvipheiih
      241 lprltslhld hnqfagripe alyrhpflke myiagnsfqk gaksigvpki leladseflv
//
LOCUS       XP_016693388             542 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693388
VERSION     XP_016693388.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837899.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..542
                     /product="uncharacterized protein"
                     /calculated_mol_wt=60647
     CDS             1..542
                     /gene="LOC107910135"
                     /coded_by="XM_016837899.2:173..1801"
                     /db_xref="GeneID:107910135"
ORIGIN      
        1 mgfkrpfdse elqelpfkhp rqfdnnnklt qfantishsy thqnphisvd veggfckcqw
       61 deafetggln derpsvdkdf etsaplslit sisseedvdt gpaaispisp ehfdfdfprr
      121 tlgpvedays llldrsprkq vqlgpnhqan vpslgrhikk dkfvqncasd tndigyeeim
      181 mgtcvipmpd sdlsandsgk vgagrtdcsc ldggslrcvr qhvmeawekl rkslghekfv
      241 klgfydmged vaykwseeee eifrevvysn paslgknfwk hfsmvfpsrs krelvsyyfn
      301 vfilqrravq nrssildsds dddewhgsqq vyevkaseed edssaiesla aqeglsnheg
      361 dclgdddddg sddddddddd sgdsdsgsgd gnyssaaarg dygvnlmlkg piaksfdesr
      421 fdpvfeqtnk dlgrvedfnv qddscmsfef qpnmvdshsl idtkadlhds qmktdlskcm
      481 qakvdgssdl vshvylldtc dakiwdaryp ttategidlq ptcniieeif gqdtwdnkmr
      541 ne
//
LOCUS       XP_016693389             542 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693389
VERSION     XP_016693389.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837900.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..542
                     /product="uncharacterized protein"
                     /calculated_mol_wt=60647
     CDS             1..542
                     /gene="LOC107910135"
                     /coded_by="XM_016837900.2:554..2182"
                     /db_xref="GeneID:107910135"
ORIGIN      
        1 mgfkrpfdse elqelpfkhp rqfdnnnklt qfantishsy thqnphisvd veggfckcqw
       61 deafetggln derpsvdkdf etsaplslit sisseedvdt gpaaispisp ehfdfdfprr
      121 tlgpvedays llldrsprkq vqlgpnhqan vpslgrhikk dkfvqncasd tndigyeeim
      181 mgtcvipmpd sdlsandsgk vgagrtdcsc ldggslrcvr qhvmeawekl rkslghekfv
      241 klgfydmged vaykwseeee eifrevvysn paslgknfwk hfsmvfpsrs krelvsyyfn
      301 vfilqrravq nrssildsds dddewhgsqq vyevkaseed edssaiesla aqeglsnheg
      361 dclgdddddg sddddddddd sgdsdsgsgd gnyssaaarg dygvnlmlkg piaksfdesr
      421 fdpvfeqtnk dlgrvedfnv qddscmsfef qpnmvdshsl idtkadlhds qmktdlskcm
      481 qakvdgssdl vshvylldtc dakiwdaryp ttategidlq ptcniieeif gqdtwdnkmr
      541 ne
//
LOCUS       XP_016693391             480 aa            linear   PLN 06-AUG-2024
DEFINITION  UDP-glucose 6-dehydrogenase 5 [Gossypium hirsutum].
ACCESSION   XP_016693391
VERSION     XP_016693391.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837902.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..480
                     /product="UDP-glucose 6-dehydrogenase 5"
                     /calculated_mol_wt=52687
     Region          1..473
                     /region_name="PLN02353"
                     /note="probable UDP-glucose 6-dehydrogenase"
                     /db_xref="CDD:177986"
     CDS             1..480
                     /gene="LOC107910136"
                     /coded_by="XM_016837902.2:720..2162"
                     /db_xref="GeneID:107910136"
ORIGIN      
        1 mvkiccigag yvggptmavi alkcpeiqva vvdisvpris awnsdtlpiy epgldevvkk
       61 crgknlffss dvekhvsead ivfvsvntpt ktqglgagka adltywesaa rmiadvsksn
      121 kivvekstvp vktaeaieki lthnskginf qilsnpefla egtaiqdlfe pdrvliggre
      181 tpegqkaika lrdvyahwvp mdriictnlw saelsklaan aflaqrissv namsalceat
      241 gadvsqvsha vgkdtrigpk flnasvgfgg scfqkdilnl vyicecnglp evanywkqvi
      301 kvndyqkarf vnqivssmfn tvsgkkiail gfafkkdtgd tretpaidvc kgllgdkaml
      361 siydpqvsee qiqrdlsmnk fdwdhpvhlq pmspssmkqv svvwdayaat kdahgicilt
      421 ewdefktldy qkiydnmqkp afvfdgrniv dvaklreigf ivysigkpld ewlkdmpava
//
LOCUS       XP_016693392             303 aa            linear   PLN 06-AUG-2024
DEFINITION  protein KTI12 homolog [Gossypium hirsutum].
ACCESSION   XP_016693392
VERSION     XP_016693392.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837903.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="protein KTI12 homolog"
                     /calculated_mol_wt=34019
     Region          3..296
                     /region_name="KTI12"
                     /note="Chromatin associated protein KTI12; pfam08433"
                     /db_xref="CDD:400643"
     CDS             1..303
                     /gene="LOC107910137"
                     /coded_by="XM_016837903.1:189..1100"
                     /db_xref="GeneID:107910137"
ORIGIN      
        1 malvvicgqp csgkstaakc laealnesec kqtvriidet sfhldrnqsy anmpseknlr
       61 gvlrsevdrs vskdniiivd slnsikgyry elwclaraag irycvlycdv geshcrkwne
      121 errekgeaay ndvifedlvr rfekpdrrnr wdsplfelwa hndgverssi aivdvvlylt
      181 kkadsksrdv kilqptiatq ntrfseansl yemdratqev inaiveaqsq siggplanis
      241 igqglpnidi srsvglpelr rlrrtfiklt gqtslsgrpp psdsnsakrm fvdylnrelg
      301 tia
//
LOCUS       XP_040944521             303 aa            linear   PLN 06-AUG-2024
DEFINITION  protein KTI12 homolog [Gossypium hirsutum].
ACCESSION   XP_040944521
VERSION     XP_040944521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088587.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="protein KTI12 homolog"
                     /calculated_mol_wt=34019
     Region          3..296
                     /region_name="KTI12"
                     /note="Chromatin associated protein KTI12; pfam08433"
                     /db_xref="CDD:400643"
     CDS             1..303
                     /gene="LOC107910137"
                     /coded_by="XM_041088587.1:150..1061"
                     /db_xref="GeneID:107910137"
ORIGIN      
        1 malvvicgqp csgkstaakc laealnesec kqtvriidet sfhldrnqsy anmpseknlr
       61 gvlrsevdrs vskdniiivd slnsikgyry elwclaraag irycvlycdv geshcrkwne
      121 errekgeaay ndvifedlvr rfekpdrrnr wdsplfelwa hndgverssi aivdvvlylt
      181 kkadsksrdv kilqptiatq ntrfseansl yemdratqev inaiveaqsq siggplanis
      241 igqglpnidi srsvglpelr rlrrtfiklt gqtslsgrpp psdsnsakrm fvdylnrelg
      301 tia
//
LOCUS       XP_016693393             618 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693393
VERSION     XP_016693393.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837904.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..618
                     /product="probable methyltransferase PMT5 isoform X1"
                     /calculated_mol_wt=69289
     Region          95..613
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..618
                     /gene="LOC107910138"
                     /coded_by="XM_016837904.2:622..2478"
                     /db_xref="GeneID:107910138"
ORIGIN      
        1 mrspwlnkls vilgprppvs wlflcvvsll alitvfgsss sssfdsvtst wvpesyknyr
       61 rlkeqaavdy felrtlssga srqrelgfcg keienyvpcy nvtanllsgf kdgeefdrhc
      121 evvgqgkwcl irppkdyktp lqwpagrdvi wsgnvkitkd qflssgsmtk rmmlleenqi
      181 afqsdagltf dgvkdysrqi aemmglgsds eflqagvrtv ldigcgfgsf gahlvsiklm
      241 alciagyeat gsqvqlaler glpamignfi trqlpypsfs fdmvhcaqcg ipwdkkegml
      301 lievdrllkp ggyfvltspk skphgsatgt kirnmltple qfpekicwsl iaqqdetfiw
      361 qktvdaqcys srkqndvplc kghdasyyqa lspciigpss krwipiqnrs ssselssael
      421 alhgvsledf fedlqgwkla lknywslltp lifsdhpkrp gaedplppfn mvrnvmdmna
      481 hygglnaafl eekksvwvmn vvpvtsrnml plildrgfpg vlhdwcepfp typrtydmlh
      541 angllshlss ercslmdlfv emdrilrpeg wvvlydklga ielarahatq irwgarvidl
      601 qngsdqrlli cqkpfltk
//
LOCUS       XP_016693394             618 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693394
VERSION     XP_016693394.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837905.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..618
                     /product="probable methyltransferase PMT5 isoform X1"
                     /calculated_mol_wt=69289
     Region          95..613
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..618
                     /gene="LOC107910138"
                     /coded_by="XM_016837905.2:620..2476"
                     /db_xref="GeneID:107910138"
ORIGIN      
        1 mrspwlnkls vilgprppvs wlflcvvsll alitvfgsss sssfdsvtst wvpesyknyr
       61 rlkeqaavdy felrtlssga srqrelgfcg keienyvpcy nvtanllsgf kdgeefdrhc
      121 evvgqgkwcl irppkdyktp lqwpagrdvi wsgnvkitkd qflssgsmtk rmmlleenqi
      181 afqsdagltf dgvkdysrqi aemmglgsds eflqagvrtv ldigcgfgsf gahlvsiklm
      241 alciagyeat gsqvqlaler glpamignfi trqlpypsfs fdmvhcaqcg ipwdkkegml
      301 lievdrllkp ggyfvltspk skphgsatgt kirnmltple qfpekicwsl iaqqdetfiw
      361 qktvdaqcys srkqndvplc kghdasyyqa lspciigpss krwipiqnrs ssselssael
      421 alhgvsledf fedlqgwkla lknywslltp lifsdhpkrp gaedplppfn mvrnvmdmna
      481 hygglnaafl eekksvwvmn vvpvtsrnml plildrgfpg vlhdwcepfp typrtydmlh
      541 angllshlss ercslmdlfv emdrilrpeg wvvlydklga ielarahatq irwgarvidl
      601 qngsdqrlli cqkpfltk
//
LOCUS       XP_016693396             593 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693396
VERSION     XP_016693396.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..593
                     /product="probable methyltransferase PMT5 isoform X2"
                     /calculated_mol_wt=66326
     Region          95..588
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..593
                     /gene="LOC107910138"
                     /coded_by="XM_016837907.2:622..2403"
                     /db_xref="GeneID:107910138"
ORIGIN      
        1 mrspwlnkls vilgprppvs wlflcvvsll alitvfgsss sssfdsvtst wvpesyknyr
       61 rlkeqaavdy felrtlssga srqrelgfcg keienyvpcy nvtanllsgf kdgeefdrhc
      121 evvgqgkwcl irppkdyktp lqwpagrdvi wsgnvkitkd qflssgsmtk rmmlleenqi
      181 afqsdagltf dgvkdysrqi aemmglgsds eflqagvrtv ldigcgfgsf gahlvsiklm
      241 alciagyeat gsqvqlaler glpamignfi trqlpypsfs fdmvhcaqcg ipwdkkegml
      301 lievdrllkp ggyfvltspk skphgsatgt kirnmltple qfpekicwsl iaqqdetfiw
      361 qktvdaqcys srkqndvplc kghdasyyqa lspciigpss krwipiqnrs ssselssael
      421 alhgvsledf fedlqgaedp lppfnmvrnv mdmnahyggl naafleekks vwvmnvvpvt
      481 srnmlplild rgfpgvlhdw cepfptyprt ydmlhangll shlssercsl mdlfvemdri
      541 lrpegwvvly dklgaielar ahatqirwga rvidlqngsd qrllicqkpf ltk
//
LOCUS       XP_040944522             432 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT5 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944522
VERSION     XP_040944522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088588.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..432
                     /product="probable methyltransferase PMT5 isoform X3"
                     /calculated_mol_wt=48002
     Region          95..>401
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..432
                     /gene="LOC107910138"
                     /coded_by="XM_041088588.1:622..1920"
                     /db_xref="GeneID:107910138"
ORIGIN      
        1 mrspwlnkls vilgprppvs wlflcvvsll alitvfgsss sssfdsvtst wvpesyknyr
       61 rlkeqaavdy felrtlssga srqrelgfcg keienyvpcy nvtanllsgf kdgeefdrhc
      121 evvgqgkwcl irppkdyktp lqwpagrdvi wsgnvkitkd qflssgsmtk rmmlleenqi
      181 afqsdagltf dgvkdysrqi aemmglgsds eflqagvrtv ldigcgfgsf gahlvsiklm
      241 alciagyeat gsqvqlaler glpamignfi trqlpypsfs fdmvhcaqcg ipwdkkegml
      301 lievdrllkp ggyfvltspk skphgsatgt kirnmltple qfpekicwsl iaqqdetfiw
      361 qktvdaqcys srkqndvplc kghdasyyqa lspciigpss krwipiqnrs ssselssael
      421 alhgksqsrr fl
//
LOCUS       XP_040944523             432 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase PMT5 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944523
VERSION     XP_040944523.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088589.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..432
                     /product="probable methyltransferase PMT5 isoform X3"
                     /calculated_mol_wt=48002
     Region          95..>401
                     /region_name="Methyltransf_29"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; pfam03141"
                     /db_xref="CDD:335237"
     CDS             1..432
                     /gene="LOC107910138"
                     /coded_by="XM_041088589.1:622..1920"
                     /db_xref="GeneID:107910138"
ORIGIN      
        1 mrspwlnkls vilgprppvs wlflcvvsll alitvfgsss sssfdsvtst wvpesyknyr
       61 rlkeqaavdy felrtlssga srqrelgfcg keienyvpcy nvtanllsgf kdgeefdrhc
      121 evvgqgkwcl irppkdyktp lqwpagrdvi wsgnvkitkd qflssgsmtk rmmlleenqi
      181 afqsdagltf dgvkdysrqi aemmglgsds eflqagvrtv ldigcgfgsf gahlvsiklm
      241 alciagyeat gsqvqlaler glpamignfi trqlpypsfs fdmvhcaqcg ipwdkkegml
      301 lievdrllkp ggyfvltspk skphgsatgt kirnmltple qfpekicwsl iaqqdetfiw
      361 qktvdaqcys srkqndvplc kghdasyyqa lspciigpss krwipiqnrs ssselssael
      421 alhgksqsrr fl
//
LOCUS       XP_016693397             616 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g26460,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693397
VERSION     XP_016693397.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837908.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="pentatricopeptide repeat-containing protein
                     At1g26460, mitochondrial"
                     /calculated_mol_wt=68971
     Region          141..189
                     /region_name="PPR_3"
                     /note="Pentatricopeptide repeat domain; pfam13812"
                     /db_xref="CDD:316342"
     Region          178..227
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          180..209
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          217..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          252..279
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          459..486
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <467..>581
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          491..537
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          493..522
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          528..555
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..616
                     /gene="LOC107910139"
                     /coded_by="XM_016837908.2:288..2138"
                     /db_xref="GeneID:107910139"
ORIGIN      
        1 masqmailtr trillrvsqa ksissfpfls qepqlaesah taetqttplp pnpasgsply
       61 henwrdpnaa rkttslaqsl iplgflsqtp gqriqylsqi ldapalmnhf adlmtqqrwt
      121 dvkelfefwv rsldkngkpn kpdvnlynhy lranfmigas agdlldlvaq mdefaivpnt
      181 aafnfvlkam kqaketeaae kllermlqgg teslpddety dlvigmlfea qqfeaalnhi
      241 dmalksgykl smqvftecva ccvkqgrlde latviemckt tdqnralypn wtlcnylaev
      301 amqadnskla fyalefmakw iargenarpp fllsvdqgli vsalatagrt yssklldvsw
      361 ailrrslrqk kvpnpesflg kiyayaslgn lqkafgtlhe feaahgkssn eaedlfspft
      421 slyplvvacs kngfetldsv yyqlenlsra dppyksvaal nciilgcgni wdierayqtf
      481 daisssfglt pdihsynali yafgklkktf easrvfehml slgvkpnaks ysllidahli
      541 nrdqkaalsm idkmvtagfv psketlkrvr rrciremdye cddkveslak kfrirmgsen
      601 rrgilfdldy gteyas
//
LOCUS       XP_016693398             616 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g26460,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693398
VERSION     XP_016693398.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837909.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="pentatricopeptide repeat-containing protein
                     At1g26460, mitochondrial"
                     /calculated_mol_wt=68971
     Region          141..189
                     /region_name="PPR_3"
                     /note="Pentatricopeptide repeat domain; pfam13812"
                     /db_xref="CDD:316342"
     Region          178..227
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          180..209
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          217..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          252..279
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          459..486
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <467..>581
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          491..537
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          493..522
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          528..555
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..616
                     /gene="LOC107910139"
                     /coded_by="XM_016837909.2:288..2138"
                     /db_xref="GeneID:107910139"
ORIGIN      
        1 masqmailtr trillrvsqa ksissfpfls qepqlaesah taetqttplp pnpasgsply
       61 henwrdpnaa rkttslaqsl iplgflsqtp gqriqylsqi ldapalmnhf adlmtqqrwt
      121 dvkelfefwv rsldkngkpn kpdvnlynhy lranfmigas agdlldlvaq mdefaivpnt
      181 aafnfvlkam kqaketeaae kllermlqgg teslpddety dlvigmlfea qqfeaalnhi
      241 dmalksgykl smqvftecva ccvkqgrlde latviemckt tdqnralypn wtlcnylaev
      301 amqadnskla fyalefmakw iargenarpp fllsvdqgli vsalatagrt yssklldvsw
      361 ailrrslrqk kvpnpesflg kiyayaslgn lqkafgtlhe feaahgkssn eaedlfspft
      421 slyplvvacs kngfetldsv yyqlenlsra dppyksvaal nciilgcgni wdierayqtf
      481 daisssfglt pdihsynali yafgklkktf easrvfehml slgvkpnaks ysllidahli
      541 nrdqkaalsm idkmvtagfv psketlkrvr rrciremdye cddkveslak kfrirmgsen
      601 rrgilfdldy gteyas
//
LOCUS       XP_016693399             189 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L18 [Gossypium hirsutum].
ACCESSION   XP_016693399
VERSION     XP_016693399.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837910.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..189
                     /product="50S ribosomal protein L18"
                     /calculated_mol_wt=20962
     Region          <96..188
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cl00379"
                     /db_xref="CDD:444873"
     CDS             1..189
                     /gene="LOC107910140"
                     /coded_by="XM_016837910.2:159..728"
                     /db_xref="GeneID:107910140"
ORIGIN      
        1 mvsiivsssa lptrslssfp thsersnklt slswassfps inisinsftl ppapslnkgp
       61 fvqaawtrrs rgeaakqpnr kswkqrtdmy irpfllnvff skkfihakvm hrgtskvisv
      121 attnakdlrn nlasltdhna criigkliae rskeadvyam syeprkgeri egklgivldt
      181 ikengiifv
//
LOCUS       XP_016693400             350 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein SKIP20 [Gossypium hirsutum].
ACCESSION   XP_016693400
VERSION     XP_016693400.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837911.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="F-box/kelch-repeat protein SKIP20"
                     /calculated_mol_wt=39304
     Region          14..55
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(18..19,21..23,26..27,30,41..43,45,48)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(18,22,25..26,29..30,33,35..36,41..43,45)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          95..>233
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          118..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          165..210
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          213..257
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..350
                     /gene="LOC107910142"
                     /coded_by="XM_016837911.2:128..1180"
                     /db_xref="GeneID:107910142"
ORIGIN      
        1 mfqemenfef stellpglpe elgleclsrl pctahrlasr vyhrwrdllq spdfyyhrkk
       61 lgytqkfacl vlsfnggtvn gpkkpgvsps ygiavfdsvs qrwdrlpvhr ypnglplfcq
      121 lascegklvv mggwdpvsyd pvtdvfiydf mtqqwrqgkd mpskrsffai gaclgrvfia
      181 gghdenknal rsawvydlrm dewsqlgems eerdecegve ieedefwvvs gyrtesqgqf
      241 dgsadvyglk sgqwrrvegv wepgrcprsc vgmgkdgklv nwaelspavr vgacgislgr
      301 rvlvtgsgyq ggphgyymve mkegqhskle kldvpdefsg cvqsgcyaei
//
LOCUS       XP_016693401             307 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016693401
VERSION     XP_016693401.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693401.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=35177
     CDS             1..307
                     /gene="LOC107910144"
                     /coded_by="XM_016837912.2:413..1336"
                     /db_xref="GeneID:107910144"
ORIGIN      
        1 mmysfnriak sitkpvmyki hskfgkphln lttlfktlst kppqngkdds wndawetawl
       61 pddispknra pweadvnfps neesakmals sdvhaetkaf vedmnenwne rrkspkqkqk
      121 eeaekegkge ggglyslehi kkdyrlkkqr ihaglwmkei dkleeaqlgd sandidrlld
      181 scseifdstn adlensrvps sselktkpdg wettskapdg nvwemsqree dillqefdrr
      241 iayckfqias fikthifsrr rpidgwkymi eeigpnarkg kgsvsrlpsl sdasrqpvke
      301 eklqlkp
//
LOCUS       XP_016693403             307 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016693403
VERSION     XP_016693403.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837914.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693403.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=35177
     CDS             1..307
                     /gene="LOC107910144"
                     /coded_by="XM_016837914.2:391..1314"
                     /db_xref="GeneID:107910144"
ORIGIN      
        1 mmysfnriak sitkpvmyki hskfgkphln lttlfktlst kppqngkdds wndawetawl
       61 pddispknra pweadvnfps neesakmals sdvhaetkaf vedmnenwne rrkspkqkqk
      121 eeaekegkge ggglyslehi kkdyrlkkqr ihaglwmkei dkleeaqlgd sandidrlld
      181 scseifdstn adlensrvps sselktkpdg wettskapdg nvwemsqree dillqefdrr
      241 iayckfqias fikthifsrr rpidgwkymi eeigpnarkg kgsvsrlpsl sdasrqpvke
      301 eklqlkp
//
LOCUS       XP_016693404             307 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016693404
VERSION     XP_016693404.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837915.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693404.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=35177
     CDS             1..307
                     /gene="LOC107910144"
                     /coded_by="XM_016837915.2:413..1336"
                     /db_xref="GeneID:107910144"
ORIGIN      
        1 mmysfnriak sitkpvmyki hskfgkphln lttlfktlst kppqngkdds wndawetawl
       61 pddispknra pweadvnfps neesakmals sdvhaetkaf vedmnenwne rrkspkqkqk
      121 eeaekegkge ggglyslehi kkdyrlkkqr ihaglwmkei dkleeaqlgd sandidrlld
      181 scseifdstn adlensrvps sselktkpdg wettskapdg nvwemsqree dillqefdrr
      241 iayckfqias fikthifsrr rpidgwkymi eeigpnarkg kgsvsrlpsl sdasrqpvke
      301 eklqlkp
//
LOCUS       XP_040944524             307 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040944524
VERSION     XP_040944524.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088590.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=35177
     CDS             1..307
                     /gene="LOC107910144"
                     /coded_by="XM_041088590.1:460..1383"
                     /db_xref="GeneID:107910144"
ORIGIN      
        1 mmysfnriak sitkpvmyki hskfgkphln lttlfktlst kppqngkdds wndawetawl
       61 pddispknra pweadvnfps neesakmals sdvhaetkaf vedmnenwne rrkspkqkqk
      121 eeaekegkge ggglyslehi kkdyrlkkqr ihaglwmkei dkleeaqlgd sandidrlld
      181 scseifdstn adlensrvps sselktkpdg wettskapdg nvwemsqree dillqefdrr
      241 iayckfqias fikthifsrr rpidgwkymi eeigpnarkg kgsvsrlpsl sdasrqpvke
      301 eklqlkp
//
LOCUS       XP_040944525             307 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GAMETE CELL DEFECTIVE 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_040944525
VERSION     XP_040944525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088591.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..307
                     /product="protein GAMETE CELL DEFECTIVE 1, mitochondrial"
                     /calculated_mol_wt=35177
     CDS             1..307
                     /gene="LOC107910144"
                     /coded_by="XM_041088591.1:391..1314"
                     /db_xref="GeneID:107910144"
ORIGIN      
        1 mmysfnriak sitkpvmyki hskfgkphln lttlfktlst kppqngkdds wndawetawl
       61 pddispknra pweadvnfps neesakmals sdvhaetkaf vedmnenwne rrkspkqkqk
      121 eeaekegkge ggglyslehi kkdyrlkkqr ihaglwmkei dkleeaqlgd sandidrlld
      181 scseifdstn adlensrvps sselktkpdg wettskapdg nvwemsqree dillqefdrr
      241 iayckfqias fikthifsrr rpidgwkymi eeigpnarkg kgsvsrlpsl sdasrqpvke
      301 eklqlkp
//
LOCUS       XP_016693406             106 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPIRAL1-like 1 [Gossypium hirsutum].
ACCESSION   XP_016693406
VERSION     XP_016693406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837917.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..106
                     /product="protein SPIRAL1-like 1"
                     /calculated_mol_wt=10425
     CDS             1..106
                     /gene="LOC107910145"
                     /coded_by="XM_016837917.2:209..529"
                     /db_xref="GeneID:107910145"
ORIGIN      
        1 mekmgrgvss gggqsslgyl fgsgeapkpv tnkseaapie aqdvskpapa pqqvakqipa
       61 ginstradgq ntgnfitdrp stkihaapgg gssldylfgg gpggsk
//
LOCUS       XP_016693405             106 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SPIRAL1-like 1 [Gossypium hirsutum].
ACCESSION   XP_016693405
VERSION     XP_016693405.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837916.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..106
                     /product="protein SPIRAL1-like 1"
                     /calculated_mol_wt=10425
     CDS             1..106
                     /gene="LOC107910145"
                     /coded_by="XM_016837916.2:242..562"
                     /db_xref="GeneID:107910145"
ORIGIN      
        1 mekmgrgvss gggqsslgyl fgsgeapkpv tnkseaapie aqdvskpapa pqqvakqipa
       61 ginstradgq ntgnfitdrp stkihaapgg gssldylfgg gpggsk
//
LOCUS       XP_016693407             225 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016693407
VERSION     XP_016693407.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837918.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..225
                     /product="ubiquinone biosynthesis protein COQ4 homolog,
                     mitochondrial"
                     /calculated_mol_wt=25466
     Region          11..221
                     /region_name="Coq4"
                     /note="Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
                     pfam05019"
                     /db_xref="CDD:461522"
     CDS             1..225
                     /gene="LOC107910146"
                     /coded_by="XM_016837918.2:229..906"
                     /db_xref="GeneID:107910146"
ORIGIN      
        1 mierarikls pwqqaavavg savgalldpr radliaalge ttgkpaferv lermrrspeg
       61 ravllerpqv isakvghawd lpentfgaay arfmgsrnfs pddrppvrfm dtdelayvtm
      121 rarevhdlwh tlfglptnli gesalkvief eqmhlpmcll svvggtsrfn akqrklffqh
      181 yfpwavkagf qctdlmcvyy eqhfhedled vrrkwgvipa ptvpk
//
LOCUS       XP_040944526             518 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 78A5 [Gossypium hirsutum].
ACCESSION   XP_040944526
VERSION     XP_040944526.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088592.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="cytochrome P450 78A5"
                     /calculated_mol_wt=58463
     Region          84..509
                     /region_name="CYP78"
                     /note="cytochrome P450 family 78; cd11076"
                     /db_xref="CDD:410699"
     Site            order(121,143,147,155,202,319,322..323,326..327,386,
                     391..392,394,454..457,460..464,467..468)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410699"
     Site            order(229,233,257,318,321..322,392)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410699"
     CDS             1..518
                     /gene="LOC121214667"
                     /coded_by="XM_041088592.1:138..1694"
                     /db_xref="GeneID:121214667"
ORIGIN      
        1 mslehgflll rspllsleaf lwalllvgti alwlspggia warfrsktsf sipgpvglpl
       61 lglltvfngs tphrilakla ktlnavklma fsvgftrfii ssdpetardi lhnsafadrp
      121 vkesayellf hramgfapfg dywrnlrris athlfspkri agfegyrrei gikmmdeing
      181 imkagdevqi kkvlhfgsln nvmatvfgkk ydfekvgegy eleelvsegy ellgifnwsd
      241 hfplicwldl qgvrkrcrnl vsrvnvfvgk iieehrlkrl seglnddncn vgefvdvlld
      301 lekheklads dmiavlwemi frgtdtvavl lewilarmvl hpevqakaqa eiesvvgksk
      361 hvsdsdipnl pylqaivket lrvhppgpll swarlaihdv hvgdyfvpag ttamvnmwai
      421 thdeklweep erfkperfme edisilgcdl rlapfgsgrr vcpgkamgla tahlwlaqll
      481 qrfkwipted rnvdltehlk lslemknplv craiprvp
//
LOCUS       XP_040944527             832 aa            linear   PLN 06-AUG-2024
DEFINITION  germinal center kinase 1 [Gossypium hirsutum].
ACCESSION   XP_040944527
VERSION     XP_040944527.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088593.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..832
                     /product="germinal center kinase 1"
                     /calculated_mol_wt=90703
     Region          239..494
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(246..249,252,254,267,269,299,315..318,362,366..367,
                     369,379..380)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..832
                     /gene="LOC107896630"
                     /coded_by="XM_041088593.1:158..2656"
                     /db_xref="GeneID:107896630"
ORIGIN      
        1 mhshsptgdr kkkmeqppts rrtrksqaks elystfvihs gsesdfgsgk skpkpqpsre
       61 pdlyatmvyk dvdeegedgs sippplkcap klfgggggtp sdaddgsgda gdlgtmivkk
      121 dhvrearggt pssfnppala gvspisargd kmdveeeedd egegfgtfvv rstarnereg
      181 sgtvvnrava stgelgfgkq ktststtplq geesrflqnn kvlsssvpdc viredpstky
      241 ellnelgkgs ygavykarni rtselvavkv islsegeeey eeirgeieml qqcshsnvvr
      301 yfgsypgeey lwivmeycgg gsvadlmndt eepleenqia yicrealkgl dylhsifkvh
      361 rdikggnill teqgevklgd fgvaaqltrt mskrntfigt phwmapeviq esrydgkvdv
      421 walgisaiem aegvpprsav hpmrvlfmis iepapmledk ekwslvfhdf vaktltkdps
      481 lrptasemvk hkfiekckcg asvmlpkiek akriraamaq qaqtiaptip gldppegsnl
      541 ngdygytvps kpqnmglqva netpatgtlk kprtldgvev tgevgefgtv ivhpgdelrk
      601 sfaqsqphng keastaieha ertvingsrr qliesqrgas atvtmeelql takgsspsif
      661 vypeqklrsd svpeargkgs dqissgtlkn etvskkkafa lqdklssiya agntvpipfl
      721 ratdispial lsdnflvgmn rdfsgtmale alqelfagdg qskkgrraqn emqfppsvyk
      781 rlassptlmn laqalayhkm cydemplqel qatqeqqtiq nlcdslrtil rl
//
LOCUS       XP_040944528             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944528
VERSION     XP_040944528.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088594.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35475
     Region          107..>206
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..316
                     /gene="LOC107936195"
                     /coded_by="XM_041088594.1:138..1088"
                     /db_xref="GeneID:107936195"
ORIGIN      
        1 matdpvpgdd tprhssnfgr gpspssgsav shtihsfskh dtikltesnf llwkhqllli
       61 legydlegfv qgtipvsspl vigvdgqlvd nlvflahkkq dkflafwlls tvsdevlvhl
      121 tsakssfdiw saienwfgvi ssikisrmrh dlysfkkasl sikkylskvk rlndsliaag
      181 sivteqeqvs iilaglwlef esvrviastt pmyldllael lldceareld llsevimqan
      241 vtsysknshs skhadgyaqn frqghrehgr gwfrgknrgn grgwsrsrpq cqlcgkfghi
      301 vqtcyhrfdd ffwcrc
//
LOCUS       XP_016724367             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724367
VERSION     XP_016724367.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868878.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35475
     Region          107..>206
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..316
                     /gene="LOC107936195"
                     /coded_by="XM_016868878.2:138..1088"
                     /db_xref="GeneID:107936195"
ORIGIN      
        1 matdpvpgdd tprhssnfgr gpspssgsav shtihsfskh dtikltesnf llwkhqllli
       61 legydlegfv qgtipvsspl vigvdgqlvd nlvflahkkq dkflafwlls tvsdevlvhl
      121 tsakssfdiw saienwfgvi ssikisrmrh dlysfkkasl sikkylskvk rlndsliaag
      181 sivteqeqvs iilaglwlef esvrviastt pmyldllael lldceareld llsevimqan
      241 vtsysknshs skhadgyaqn frqghrehgr gwfrgknrgn grgwsrsrpq cqlcgkfghi
      301 vqtcyhrfdd ffwcrc
//
LOCUS       XP_016724375             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724375
VERSION     XP_016724375.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868886.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35475
     Region          107..>206
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..316
                     /gene="LOC107936195"
                     /coded_by="XM_016868886.2:138..1088"
                     /db_xref="GeneID:107936195"
ORIGIN      
        1 matdpvpgdd tprhssnfgr gpspssgsav shtihsfskh dtikltesnf llwkhqllli
       61 legydlegfv qgtipvsspl vigvdgqlvd nlvflahkkq dkflafwlls tvsdevlvhl
      121 tsakssfdiw saienwfgvi ssikisrmrh dlysfkkasl sikkylskvk rlndsliaag
      181 sivteqeqvs iilaglwlef esvrviastt pmyldllael lldceareld llsevimqan
      241 vtsysknshs skhadgyaqn frqghrehgr gwfrgknrgn grgwsrsrpq cqlcgkfghi
      301 vqtcyhrfdd ffwcrc
//
LOCUS       XP_040944529             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944529
VERSION     XP_040944529.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088595.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35475
     Region          107..>206
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..316
                     /gene="LOC107936195"
                     /coded_by="XM_041088595.1:138..1088"
                     /db_xref="GeneID:107936195"
ORIGIN      
        1 matdpvpgdd tprhssnfgr gpspssgsav shtihsfskh dtikltesnf llwkhqllli
       61 legydlegfv qgtipvsspl vigvdgqlvd nlvflahkkq dkflafwlls tvsdevlvhl
      121 tsakssfdiw saienwfgvi ssikisrmrh dlysfkkasl sikkylskvk rlndsliaag
      181 sivteqeqvs iilaglwlef esvrviastt pmyldllael lldceareld llsevimqan
      241 vtsysknshs skhadgyaqn frqghrehgr gwfrgknrgn grgwsrsrpq cqlcgkfghi
      301 vqtcyhrfdd ffwcrc
//
LOCUS       XP_016724387             266 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 1 [Gossypium hirsutum].
ACCESSION   XP_016724387
VERSION     XP_016724387.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868898.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724387.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="probable 6-phosphogluconolactonase 1"
                     /calculated_mol_wt=29088
     Region          1..266
                     /region_name="PLN02360"
                     /note="probable 6-phosphogluconolactonase"
                     /db_xref="CDD:166001"
     Site            order(52..53,82,163,194,217)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238694"
     CDS             1..266
                     /gene="LOC107936207"
                     /coded_by="XM_016868898.2:269..1069"
                     /db_xref="GeneID:107936207"
ORIGIN      
        1 malsevnndr gelrilenld elrtdladyi aelseaavke rgvfaialsg gslidlmgkl
       61 ceapynktvd wakwyifwad ervvaknhsd snyklakdgl lskvpivpsh vhsindsvsa
      121 eeaadeymfv irqlvktrmv svsdisdcpk fdlillgmgp dghiaslfpn hsaldetdew
      181 vtfiidspkp pperitftlp vinsasnvam vvtgeskaea vhlaidnigp dcpslparlv
      241 qptkgklvwf ldkpaaskld glqfse
//
LOCUS       XP_016724396             266 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 1 [Gossypium hirsutum].
ACCESSION   XP_016724396
VERSION     XP_016724396.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724396.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="probable 6-phosphogluconolactonase 1"
                     /calculated_mol_wt=29088
     Region          1..266
                     /region_name="PLN02360"
                     /note="probable 6-phosphogluconolactonase"
                     /db_xref="CDD:166001"
     Site            order(52..53,82,163,194,217)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238694"
     CDS             1..266
                     /gene="LOC107936207"
                     /coded_by="XM_016868907.2:105..905"
                     /db_xref="GeneID:107936207"
ORIGIN      
        1 malsevnndr gelrilenld elrtdladyi aelseaavke rgvfaialsg gslidlmgkl
       61 ceapynktvd wakwyifwad ervvaknhsd snyklakdgl lskvpivpsh vhsindsvsa
      121 eeaadeymfv irqlvktrmv svsdisdcpk fdlillgmgp dghiaslfpn hsaldetdew
      181 vtfiidspkp pperitftlp vinsasnvam vvtgeskaea vhlaidnigp dcpslparlv
      241 qptkgklvwf ldkpaaskld glqfse
//
LOCUS       XP_040944530             266 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 6-phosphogluconolactonase 1 [Gossypium hirsutum].
ACCESSION   XP_040944530
VERSION     XP_040944530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088596.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="probable 6-phosphogluconolactonase 1"
                     /calculated_mol_wt=29088
     Region          1..266
                     /region_name="PLN02360"
                     /note="probable 6-phosphogluconolactonase"
                     /db_xref="CDD:166001"
     Site            order(52..53,82,163,194,217)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238694"
     CDS             1..266
                     /gene="LOC107936207"
                     /coded_by="XM_041088596.1:42..842"
                     /db_xref="GeneID:107936207"
ORIGIN      
        1 malsevnndr gelrilenld elrtdladyi aelseaavke rgvfaialsg gslidlmgkl
       61 ceapynktvd wakwyifwad ervvaknhsd snyklakdgl lskvpivpsh vhsindsvsa
      121 eeaadeymfv irqlvktrmv svsdisdcpk fdlillgmgp dghiaslfpn hsaldetdew
      181 vtfiidspkp pperitftlp vinsasnvam vvtgeskaea vhlaidnigp dcpslparlv
      241 qptkgklvwf ldkpaaskld glqfse
//
LOCUS       XP_016724406             134 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b5 [Gossypium hirsutum].
ACCESSION   XP_016724406
VERSION     XP_016724406.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868917.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..134
                     /product="cytochrome b5"
                     /calculated_mol_wt=14744
     Region          9..81
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     CDS             1..134
                     /gene="LOC107936222"
                     /coded_by="XM_016868917.2:116..520"
                     /db_xref="GeneID:107936222"
ORIGIN      
        1 mptltklytm eeasqhntkd dcwvvidgkv ydvtpyldeh pggddvvlaa tgkdatddfe
       61 daghsksake lmqnfyigel dtsapiipel eiaskketan ysrnlmdltk qywavpvaiv
      121 gisvvagfiy lrkk
//
LOCUS       XP_040944531             405 aa            linear   PLN 06-AUG-2024
DEFINITION  PI-PLC X domain-containing protein At5g67130 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944531
VERSION     XP_040944531.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088597.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..405
                     /product="PI-PLC X domain-containing protein At5g67130
                     isoform X1"
                     /calculated_mol_wt=45450
     Region          110..377
                     /region_name="PI-PLCc_At5g67130_like"
                     /note="Catalytic domain of Arabidopsis thaliana PI-PLC X
                     domain-containing protein At5g67130 and its
                     uncharacterized homologs; cd08588"
                     /db_xref="CDD:176530"
     Site            order(123,162,174,212,265,286,288,359)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176530"
     Site            order(123,174)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176530"
     CDS             1..405
                     /gene="LOC107936233"
                     /coded_by="XM_041088597.1:7..1224"
                     /db_xref="GeneID:107936233"
ORIGIN      
        1 mfpgfpslsf snpsigifsi efdlylitsq thhfffsfyp lqiylqypkf ilplkkkkqw
       61 ntqescfqlg decssdadcq tglscfscse afdglrcirs tttnqfefmn slpfnryayl
      121 tthnsfanev eplhtgirlt flnqednvtq qlnngvralm ldtydfkgdi wlchsfggrc
      181 hdftafwlai dtlkeveafl sanpseivtl fledyvetpn glskvfkdag lmkywfpvss
      241 mpqngrdwpl vkdmvasnqr fvvftsaksk qesegiayqw nyvvenhygd vgehpgecsn
      301 rgesaplddk skslvlinhf hsialkvmac ednsaslism ldtcygragn rwanfvavdy
      361 ykrsdgggvf qavdklngql lcgcddvhsc vpgsssatcs atkdq
//
LOCUS       XP_040944532             405 aa            linear   PLN 06-AUG-2024
DEFINITION  PI-PLC X domain-containing protein At5g67130 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944532
VERSION     XP_040944532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088598.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..405
                     /product="PI-PLC X domain-containing protein At5g67130
                     isoform X1"
                     /calculated_mol_wt=45450
     Region          110..377
                     /region_name="PI-PLCc_At5g67130_like"
                     /note="Catalytic domain of Arabidopsis thaliana PI-PLC X
                     domain-containing protein At5g67130 and its
                     uncharacterized homologs; cd08588"
                     /db_xref="CDD:176530"
     Site            order(123,162,174,212,265,286,288,359)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176530"
     Site            order(123,174)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176530"
     CDS             1..405
                     /gene="LOC107936233"
                     /coded_by="XM_041088598.1:7..1224"
                     /db_xref="GeneID:107936233"
ORIGIN      
        1 mfpgfpslsf snpsigifsi efdlylitsq thhfffsfyp lqiylqypkf ilplkkkkqw
       61 ntqescfqlg decssdadcq tglscfscse afdglrcirs tttnqfefmn slpfnryayl
      121 tthnsfanev eplhtgirlt flnqednvtq qlnngvralm ldtydfkgdi wlchsfggrc
      181 hdftafwlai dtlkeveafl sanpseivtl fledyvetpn glskvfkdag lmkywfpvss
      241 mpqngrdwpl vkdmvasnqr fvvftsaksk qesegiayqw nyvvenhygd vgehpgecsn
      301 rgesaplddk skslvlinhf hsialkvmac ednsaslism ldtcygragn rwanfvavdy
      361 ykrsdgggvf qavdklngql lcgcddvhsc vpgsssatcs atkdq
//
LOCUS       XP_016724417             367 aa            linear   PLN 06-AUG-2024
DEFINITION  PI-PLC X domain-containing protein At5g67130 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016724417
VERSION     XP_016724417.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724417.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="PI-PLC X domain-containing protein At5g67130
                     isoform X2"
                     /calculated_mol_wt=40517
     Region          72..339
                     /region_name="PI-PLCc_At5g67130_like"
                     /note="Catalytic domain of Arabidopsis thaliana PI-PLC X
                     domain-containing protein At5g67130 and its
                     uncharacterized homologs; cd08588"
                     /db_xref="CDD:176530"
     Site            order(85,124,136,174,227,248,250,321)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176530"
     Site            order(85,136)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176530"
     CDS             1..367
                     /gene="LOC107936233"
                     /coded_by="XM_016868928.2:91..1194"
                     /db_xref="GeneID:107936233"
ORIGIN      
        1 mehprilfsg slisfavita tfacsngqck lgdecssdad cqtglscfsc seafdglrci
       61 rstttnqfef mnslpfnrya yltthnsfan eveplhtgir ltflnqednv tqqlnngvra
      121 lmldtydfkg diwlchsfgg rchdftafwl aidtlkevea flsanpseiv tlfledyvet
      181 pnglskvfkd aglmkywfpv ssmpqngrdw plvkdmvasn qrfvvftsak skqesegiay
      241 qwnyvvenhy gdvgehpgec snrgesapld dkskslvlin hfhsialkvm acednsasli
      301 smldtcygra gnrwanfvav dyykrsdggg vfqavdklng qllcgcddvh scvpgsssat
      361 csatkdq
//
LOCUS       XP_040944533             184 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CRABS CLAW isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944533
VERSION     XP_040944533.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088599.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="protein CRABS CLAW isoform X1"
                     /calculated_mol_wt=20132
     Region          15..158
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..184
                     /gene="LOC107939930"
                     /coded_by="XM_041088599.1:150..704"
                     /db_xref="GeneID:107939930"
ORIGIN      
        1 mnledkvgmd lvpqsehlcy vrcnfcntvl avgipckrll etvtvkcghc snlsflstrp
       61 plqgqcldpq tsltlqemqs fcgdfrkgtq fpspssstss epsspkapfv vkppekkhrl
      121 psaynrfmke eiqrikaanp eiphreafsa aaknwaryip nspaassvcg sssngfyenf
      181 agtk
//
LOCUS       XP_016728812             181 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CRABS CLAW isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016728812
VERSION     XP_016728812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873323.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="protein CRABS CLAW isoform X2"
                     /calculated_mol_wt=19744
     Region          15..155
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..181
                     /gene="LOC107939930"
                     /coded_by="XM_016873323.2:144..689"
                     /db_xref="GeneID:107939930"
ORIGIN      
        1 mnledkvgmd lvpqsehlcy vrcnfcntvl avgipckrll etvtvkcghc snlsflstrp
       61 plqgqcldpq tsltlqsfcg dfrkgtqfps pssstsseps spkapfvvkp pekkhrlpsa
      121 ynrfmkeeiq rikaanpeip hreafsaaak nwaryipnsp aassvcgsss ngfyenfagt
      181 k
//
LOCUS       XP_040944534             180 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CRABS CLAW isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944534
VERSION     XP_040944534.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088600.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..180
                     /product="protein CRABS CLAW isoform X3"
                     /calculated_mol_wt=19716
     Region          15..158
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..180
                     /gene="LOC107939930"
                     /coded_by="XM_041088600.1:147..689"
                     /db_xref="GeneID:107939930"
ORIGIN      
        1 mnledkvgmd lvpqsehlcy vrcnfcntvl avgipckrll etvtvkcghc snlsflstrp
       61 plqgqcldpq tsltlqemqs fcgdfrkgtq fpspssstss epsspkapfv vkppekkhrl
      121 psaynrfmke eiqrikaanp eiphreafsa aaknwaryip nspaassvcg sssneqndnv
//
LOCUS       XP_040944535             178 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CRABS CLAW isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944535
VERSION     XP_040944535.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088601.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..178
                     /product="protein CRABS CLAW isoform X4"
                     /calculated_mol_wt=19501
     Region          15..158
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..178
                     /gene="LOC107939930"
                     /coded_by="XM_041088601.1:150..686"
                     /db_xref="GeneID:107939930"
ORIGIN      
        1 mnledkvgmd lvpqsehlcy vrcnfcntvl avgipckrll etvtvkcghc snlsflstrp
       61 plqgqcldpq tsltlqemqs fcgdfrkgtq fpspssstss epsspkapfv vkppekkhrl
      121 psaynrfmke eiqrikaanp eiphreafsa aaknwaryip nspaassvcg sssnvrtk
//
LOCUS       XP_016728817             177 aa            linear   PLN 06-AUG-2024
DEFINITION  protein CRABS CLAW isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016728817
VERSION     XP_016728817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873328.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..177
                     /product="protein CRABS CLAW isoform X5"
                     /calculated_mol_wt=19328
     Region          15..155
                     /region_name="YABBY"
                     /note="YABBY protein; pfam04690"
                     /db_xref="CDD:461393"
     CDS             1..177
                     /gene="LOC107939930"
                     /coded_by="XM_016873328.2:142..675"
                     /db_xref="GeneID:107939930"
ORIGIN      
        1 mnledkvgmd lvpqsehlcy vrcnfcntvl avgipckrll etvtvkcghc snlsflstrp
       61 plqgqcldpq tsltlqsfcg dfrkgtqfps pssstsseps spkapfvvkp pekkhrlpsa
      121 ynrfmkeeiq rikaanpeip hreafsaaak nwaryipnsp aassvcgsss neqndnv
//
LOCUS       XP_016724434             229 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 12 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724434
VERSION     XP_016724434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868945.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..229
                     /product="squamosa promoter-binding-like protein 12
                     isoform X1"
                     /calculated_mol_wt=25298
     Region          166..212
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..229
                     /gene="LOC107936244"
                     /coded_by="XM_016868945.2:210..899"
                     /db_xref="GeneID:107936244"
ORIGIN      
        1 meswsygseg kglsfademd lavdasgsrk allgrdikpf tdseavesle fmdfgfshmn
       61 kkpfygntsl gfgaefanes akklvsptcm ftsssyygee esgskqsssl mefnsqgssl
      121 idlklgrltd yrdaqhcrhf ketfvvssvc samtakkart tsspccqvhg cnndirsskd
      181 yhkrhkvavn gieqrfcqqc ssrrscrtll agimssneay ircsswkte
//
LOCUS       XP_016724426             229 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 12 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724426
VERSION     XP_016724426.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868937.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..229
                     /product="squamosa promoter-binding-like protein 12
                     isoform X1"
                     /calculated_mol_wt=25298
     Region          166..212
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..229
                     /gene="LOC107936244"
                     /coded_by="XM_016868937.2:160..849"
                     /db_xref="GeneID:107936244"
ORIGIN      
        1 meswsygseg kglsfademd lavdasgsrk allgrdikpf tdseavesle fmdfgfshmn
       61 kkpfygntsl gfgaefanes akklvsptcm ftsssyygee esgskqsssl mefnsqgssl
      121 idlklgrltd yrdaqhcrhf ketfvvssvc samtakkart tsspccqvhg cnndirsskd
      181 yhkrhkvavn gieqrfcqqc ssrrscrtll agimssneay ircsswkte
//
LOCUS       XP_040944536             229 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 12 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944536
VERSION     XP_040944536.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088602.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..229
                     /product="squamosa promoter-binding-like protein 12
                     isoform X1"
                     /calculated_mol_wt=25298
     Region          166..212
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..229
                     /gene="LOC107936244"
                     /coded_by="XM_041088602.1:210..899"
                     /db_xref="GeneID:107936244"
ORIGIN      
        1 meswsygseg kglsfademd lavdasgsrk allgrdikpf tdseavesle fmdfgfshmn
       61 kkpfygntsl gfgaefanes akklvsptcm ftsssyygee esgskqsssl mefnsqgssl
      121 idlklgrltd yrdaqhcrhf ketfvvssvc samtakkart tsspccqvhg cnndirsskd
      181 yhkrhkvavn gieqrfcqqc ssrrscrtll agimssneay ircsswkte
//
LOCUS       XP_040944537             228 aa            linear   PLN 06-AUG-2024
DEFINITION  squamosa promoter-binding-like protein 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944537
VERSION     XP_040944537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088603.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..228
                     /product="squamosa promoter-binding-like protein 2 isoform
                     X2"
                     /calculated_mol_wt=25211
     Region          166..211
                     /region_name="SBP"
                     /note="SBP domain; pfam03110"
                     /db_xref="CDD:460809"
     CDS             1..228
                     /gene="LOC107936244"
                     /coded_by="XM_041088603.1:210..896"
                     /db_xref="GeneID:107936244"
ORIGIN      
        1 meswsygseg kglsfademd lavdasgsrk allgrdikpf tdseavesle fmdfgfshmn
       61 kkpfygntsl gfgaefanes akklvsptcm ftsssyygee esgskqsssl mefnsqgssl
      121 idlklgrltd yrdaqhcrhf ketfvvssvc samtakkart tsspccqvhg cnndirsskd
      181 yhkrhkvavn gieqrfcqqc srrscrtlla gimssneayi rcsswkte
//
LOCUS       XP_016724449             141 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724449
VERSION     XP_016724449.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868960.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..141
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic isoform X1"
                     /calculated_mol_wt=15296
     Region          <1..>102
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..141
                     /gene="LOC107936264"
                     /coded_by="XM_016868960.2:1103..1528"
                     /db_xref="GeneID:107936264"
ORIGIN      
        1 maniivaqll yldvvdpqkd ivmyvnspgg svtagmaifd vmrhirpdvs tvcvglaasm
       61 gafllsagtk gkryslpnsr vmihqplcga eggqtdidiq vksysiyher sepvdppspt
      121 rqfnpktaap ffkeifyvsy l
//
LOCUS       XP_016724453             141 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724453
VERSION     XP_016724453.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868964.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..141
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic isoform X1"
                     /calculated_mol_wt=15296
     Region          <1..>102
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..141
                     /gene="LOC107936264"
                     /coded_by="XM_016868964.2:908..1333"
                     /db_xref="GeneID:107936264"
ORIGIN      
        1 maniivaqll yldvvdpqkd ivmyvnspgg svtagmaifd vmrhirpdvs tvcvglaasm
       61 gafllsagtk gkryslpnsr vmihqplcga eggqtdidiq vksysiyher sepvdppspt
      121 rqfnpktaap ffkeifyvsy l
//
LOCUS       XP_040944538             141 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944538
VERSION     XP_040944538.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088604.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..141
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic isoform X1"
                     /calculated_mol_wt=15296
     Region          <1..>102
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..141
                     /gene="LOC107936264"
                     /coded_by="XM_041088604.1:1109..1534"
                     /db_xref="GeneID:107936264"
ORIGIN      
        1 maniivaqll yldvvdpqkd ivmyvnspgg svtagmaifd vmrhirpdvs tvcvglaasm
       61 gafllsagtk gkryslpnsr vmihqplcga eggqtdidiq vksysiyher sepvdppspt
      121 rqfnpktaap ffkeifyvsy l
//
LOCUS       XP_040944539             122 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944539
VERSION     XP_040944539.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088605.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..122
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic isoform X2"
                     /calculated_mol_wt=12850
     Region          <1..>100
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..122
                     /gene="LOC107936264"
                     /coded_by="XM_041088605.1:1103..1471"
                     /db_xref="GeneID:107936264"
ORIGIN      
        1 maniivaqll yldvvdpqkd ivmyvnspgg svtagmaifd vmrhirpdvs tvcvglaasm
       61 gafllsagtk gkryslpnsr vmihqplcga eggqtdidiq vlcfisqqal clnfvlpslp
      121 sv
//
LOCUS       XP_040944540             103 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944540
VERSION     XP_040944540.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088606.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..103
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic isoform X3"
                     /calculated_mol_wt=10879
     Region          <1..>100
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..103
                     /gene="LOC107936264"
                     /coded_by="XM_041088606.1:893..1204"
                     /db_xref="GeneID:107936264"
ORIGIN      
        1 maniivaqll yldvvdpqkd ivmyvnspgg svtagmaifd vmrhirpdvs tvcvglaasm
       61 gafllsagtk gkryslpnsr vmihqplcga eggqtdidiq dtw
//
LOCUS       XP_016724478             103 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016724478
VERSION     XP_016724478.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868989.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..103
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic isoform X3"
                     /calculated_mol_wt=10879
     Region          <1..>100
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..103
                     /gene="LOC107936264"
                     /coded_by="XM_016868989.2:1117..1428"
                     /db_xref="GeneID:107936264"
ORIGIN      
        1 maniivaqll yldvvdpqkd ivmyvnspgg svtagmaifd vmrhirpdvs tvcvglaasm
       61 gafllsagtk gkryslpnsr vmihqplcga eggqtdidiq dtw
//
LOCUS       XP_016724488             448 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BIG GRAIN 1-like E [Gossypium hirsutum].
ACCESSION   XP_016724488
VERSION     XP_016724488.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016868999.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..448
                     /product="protein BIG GRAIN 1-like E"
                     /calculated_mol_wt=50669
     CDS             1..448
                     /gene="LOC107936302"
                     /coded_by="XM_016868999.2:309..1655"
                     /db_xref="GeneID:107936302"
ORIGIN      
        1 mepwptttqk sqfplkqskv priqgntnsl pptiqntssg fhsmrrikkr slfpfyptsl
       61 vlklknikcg vsfknlqihs ssyyiirqsn slllptyfka ipshysqfli isntlplyti
      121 splpssispl kkptmsvtgv sdtdrmlkks fhrrndsgel dvfeaaryfs gyneassync
      181 atftqkimre erqpwrggrv sldvpmrnpl pqqvhvvdkq ikdkkykqps spggrlasfl
      241 nslfnqtgsk kkksksttqs mkgeeespsg rrkrrssish frssstaetk slysasssgf
      301 rtpppyahtp tksyrefrsy sdhrevlsls knnigqikpt alenvatddk rniteklkfn
      361 nghsekhknl dvchqekgrn wgdrhpseek eirtfnktdd dadsdsssdl felqnydlgi
      421 yssgglpvye tthmdtikrg tpisngal
//
LOCUS       XP_016724500             651 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g19191,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016724500
VERSION     XP_016724500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869011.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..651
                     /product="pentatricopeptide repeat-containing protein
                     At4g19191, mitochondrial"
                     /calculated_mol_wt=71988
     Region          11..638
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          22..48
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          93..118
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          122..149
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          194..219
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          223..250
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          295..320
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          324..351
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          394..421
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          425..452
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          458..488
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          494..520
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..651
                     /gene="LOC107936312"
                     /coded_by="XM_016869011.2:193..2148"
                     /db_xref="GeneID:107936312"
ORIGIN      
        1 maartvtqgl nvfskflsvk lwnsrikeav nqesaqkall lfcqmkqkdl epnnltfpfv
       61 akacaklsnl kcsqsvhsqi lkspfgnnif iqtavvdmyv kcdkvdyayk vfermpdrdl
      121 aawnamllgf aqlgflgevf clldgmrfag ihpdsvtvvg lslgvlsvks lelvrgihaf
      181 giqngvaanv svantwisvy akcgdlasse kvfdeidvkt viswnsmiag yanfenflda
      241 fglyrrmlva girpdassiv slisscvqpe alfqgtlihs hgiklgcdln lsvtntlism
      301 yskcgdvnsa rllfdcmsdr thvswtvmis gyaekgnmde amslffsmek vgetpdlvti
      361 lsllsgcskt gslelgklid syakskefkd nimvcnalid myskcgsive akevfhamre
      421 ktivswttmi sgcamngqfe ealdlfhqmr slglkpnhit flavlqacth agfldkgwef
      481 fnmmtivydi spgldhyscm adllgrkgkl kealefvlnm piepdaails allsackvhq
      541 nieigkyvas rllemepqea apyvemaniy astgkwdrva mirllmkhnk vskspgesli
      601 qingkthrft vedrsnsegv liftllddla lqlkddgyll hlgyipefef i
//
LOCUS       XP_040944541             113 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944541
VERSION     XP_040944541.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088607.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..113
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11998
     CDS             1..113
                     /gene="LOC107939955"
                     /coded_by="XM_041088607.1:306..647"
                     /db_xref="GeneID:107939955"
ORIGIN      
        1 maesgsefpg fqicvhkeel vfrrplsrlq rraprplqik pnadgnasps qamdfnlkss
       61 ssssssaaaa aatsstsfss fyqskdpipl lsplvlptll qssylhqegn tat
//
LOCUS       XP_016724530             447 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724530
VERSION     XP_016724530.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869041.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..447
                     /product="ACT domain-containing protein ACR4 isoform X1"
                     /calculated_mol_wt=50355
     Region          37..107
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          126..199
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          257..331
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          335..406
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..447
                     /gene="LOC107936334"
                     /coded_by="XM_016869041.2:352..1695"
                     /db_xref="GeneID:107936334"
ORIGIN      
        1 memnmsfshd mgdeyekfir rmnpprvvid neacknatvi rvdcanehgi llevvqiltd
       61 lnliinkayi sadgnwfmdv fnvtdqdgnk itdegildyi tkslgpescf tsamrsvgvk
      121 qtmdhteiel tgsdrpglls elsavlkhlk cnvvnaevwt hntraaaviq vtdeetgtsi
      181 tnlerlsrik ellcnvlkgs nksslaktiv shsvthtdrr lhqmmfadrd yeqtgddvle
      241 drqrpnvdvv nwydkdysvv tirckdrpkl lfdtvctltd mgyvvfhaki dtegpqsyqe
      301 yyirhvdgsp vksdaerqrv tqcleaaikr rvseglklel cttdrvglls dvtrifrens
      361 ltvsraevtt kdgkavntfy vrdasgypvd aktiefirqv igqtilkvkg spedvksvsq
      421 esptrflfgg lfksrsfvnf slvrsys
//
LOCUS       XP_016724542             447 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724542
VERSION     XP_016724542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869053.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..447
                     /product="ACT domain-containing protein ACR4 isoform X1"
                     /calculated_mol_wt=50355
     Region          37..107
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          126..199
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          257..331
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          335..406
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..447
                     /gene="LOC107936334"
                     /coded_by="XM_016869053.2:338..1681"
                     /db_xref="GeneID:107936334"
ORIGIN      
        1 memnmsfshd mgdeyekfir rmnpprvvid neacknatvi rvdcanehgi llevvqiltd
       61 lnliinkayi sadgnwfmdv fnvtdqdgnk itdegildyi tkslgpescf tsamrsvgvk
      121 qtmdhteiel tgsdrpglls elsavlkhlk cnvvnaevwt hntraaaviq vtdeetgtsi
      181 tnlerlsrik ellcnvlkgs nksslaktiv shsvthtdrr lhqmmfadrd yeqtgddvle
      241 drqrpnvdvv nwydkdysvv tirckdrpkl lfdtvctltd mgyvvfhaki dtegpqsyqe
      301 yyirhvdgsp vksdaerqrv tqcleaaikr rvseglklel cttdrvglls dvtrifrens
      361 ltvsraevtt kdgkavntfy vrdasgypvd aktiefirqv igqtilkvkg spedvksvsq
      421 esptrflfgg lfksrsfvnf slvrsys
//
LOCUS       XP_016724549             447 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724549
VERSION     XP_016724549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..447
                     /product="ACT domain-containing protein ACR4 isoform X1"
                     /calculated_mol_wt=50355
     Region          37..107
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          126..199
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          257..331
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          335..406
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..447
                     /gene="LOC107936334"
                     /coded_by="XM_016869060.2:210..1553"
                     /db_xref="GeneID:107936334"
ORIGIN      
        1 memnmsfshd mgdeyekfir rmnpprvvid neacknatvi rvdcanehgi llevvqiltd
       61 lnliinkayi sadgnwfmdv fnvtdqdgnk itdegildyi tkslgpescf tsamrsvgvk
      121 qtmdhteiel tgsdrpglls elsavlkhlk cnvvnaevwt hntraaaviq vtdeetgtsi
      181 tnlerlsrik ellcnvlkgs nksslaktiv shsvthtdrr lhqmmfadrd yeqtgddvle
      241 drqrpnvdvv nwydkdysvv tirckdrpkl lfdtvctltd mgyvvfhaki dtegpqsyqe
      301 yyirhvdgsp vksdaerqrv tqcleaaikr rvseglklel cttdrvglls dvtrifrens
      361 ltvsraevtt kdgkavntfy vrdasgypvd aktiefirqv igqtilkvkg spedvksvsq
      421 esptrflfgg lfksrsfvnf slvrsys
//
LOCUS       XP_016724552             445 aa            linear   PLN 06-AUG-2024
DEFINITION  ACT domain-containing protein ACR4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724552
VERSION     XP_016724552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..445
                     /product="ACT domain-containing protein ACR4 isoform X2"
                     /calculated_mol_wt=50095
     Region          35..105
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          124..197
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          255..329
                     /region_name="ACT_ACR_3"
                     /note="ACT domain-containing protein which is composed
                     almost entirely of four ACT domain repeats (the 'ACR'
                     protein); cd04897"
                     /db_xref="CDD:153169"
     Region          333..404
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     CDS             1..445
                     /gene="LOC107936334"
                     /coded_by="XM_016869063.2:233..1570"
                     /db_xref="GeneID:107936334"
ORIGIN      
        1 mnmsfshdmg deyekfirrm npprvvidne acknatvirv dcanehgill evvqiltdln
       61 liinkayisa dgnwfmdvfn vtdqdgnkit degildyitk slgpescfts amrsvgvkqt
      121 mdhteieltg sdrpgllsel savlkhlkcn vvnaevwthn traaaviqvt deetgtsitn
      181 lerlsrikel lcnvlkgsnk sslaktivsh svthtdrrlh qmmfadrdye qtgddvledr
      241 qrpnvdvvnw ydkdysvvti rckdrpkllf dtvctltdmg yvvfhakidt egpqsyqeyy
      301 irhvdgspvk sdaerqrvtq cleaaikrrv seglklelct tdrvgllsdv trifrenslt
      361 vsraevttkd gkavntfyvr dasgypvdak tiefirqvig qtilkvkgsp edvksvsqes
      421 ptrflfgglf ksrsfvnfsl vrsys
//
LOCUS       XP_016724564             245 aa            linear   PLN 06-AUG-2024
DEFINITION  translin-associated protein X isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724564
VERSION     XP_016724564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..245
                     /product="translin-associated protein X isoform X1"
                     /calculated_mol_wt=27470
     Region          23..221
                     /region_name="Translin"
                     /note="Translin family; pfam01997"
                     /db_xref="CDD:460410"
     CDS             1..245
                     /gene="LOC107936360"
                     /coded_by="XM_016869075.2:191..928"
                     /db_xref="GeneID:107936360"
ORIGIN      
        1 msthsslkda fssyadhlna lnekrerivk asrdvtmnsk kvifqvhris kanreevlek
       61 aekdlaavrd qhisrlvkel qgtdfwklrr ayspgvqeyv eaatffkfcq tgtllnldei
      121 nasllslsdp sleplqinll dyllgladlt gelmrlaigr isdgeveyse ricqfvrdiy
      181 reltllvplm ddgsdmktkm dtmlqsvvki enacfsvrvr gseyipllgs sdpssflvgv
      241 sdgel
//
LOCUS       XP_016724569             245 aa            linear   PLN 06-AUG-2024
DEFINITION  translin-associated protein X isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724569
VERSION     XP_016724569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869080.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..245
                     /product="translin-associated protein X isoform X1"
                     /calculated_mol_wt=27470
     Region          23..221
                     /region_name="Translin"
                     /note="Translin family; pfam01997"
                     /db_xref="CDD:460410"
     CDS             1..245
                     /gene="LOC107936360"
                     /coded_by="XM_016869080.2:170..907"
                     /db_xref="GeneID:107936360"
ORIGIN      
        1 msthsslkda fssyadhlna lnekrerivk asrdvtmnsk kvifqvhris kanreevlek
       61 aekdlaavrd qhisrlvkel qgtdfwklrr ayspgvqeyv eaatffkfcq tgtllnldei
      121 nasllslsdp sleplqinll dyllgladlt gelmrlaigr isdgeveyse ricqfvrdiy
      181 reltllvplm ddgsdmktkm dtmlqsvvki enacfsvrvr gseyipllgs sdpssflvgv
      241 sdgel
//
LOCUS       XP_040944542             209 aa            linear   PLN 06-AUG-2024
DEFINITION  translin-associated protein X isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944542
VERSION     XP_040944542.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088608.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="translin-associated protein X isoform X2"
                     /calculated_mol_wt=23410
     Region          3..185
                     /region_name="Translin"
                     /note="Translin family; pfam01997"
                     /db_xref="CDD:460410"
     CDS             1..209
                     /gene="LOC107936360"
                     /coded_by="XM_041088608.1:373..1002"
                     /db_xref="GeneID:107936360"
ORIGIN      
        1 mnskkvifqv hriskanree vlekaekdla avrdqhisrl vkelqgtdfw klrrayspgv
       61 qeyveaatff kfcqtgtlln ldeinaslls lsdpsleplq inlldyllgl adltgelmrl
      121 aigrisdgev eysericqfv rdiyreltll vplmddgsdm ktkmdtmlqs vvkienacfs
      181 vrvrgseyip llgssdpssf lvgvsdgel
//
LOCUS       XP_016724592             200 aa            linear   PLN 06-AUG-2024
DEFINITION  translin-associated protein X isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016724592
VERSION     XP_016724592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="translin-associated protein X isoform X3"
                     /calculated_mol_wt=22257
     Region          5..176
                     /region_name="Translin"
                     /note="Translin family; pfam01997"
                     /db_xref="CDD:460410"
     CDS             1..200
                     /gene="LOC107936360"
                     /coded_by="XM_016869103.2:109..711"
                     /db_xref="GeneID:107936360"
ORIGIN      
        1 mpsiskanre evlekaekdl aavrdqhisr lvkelqgtdf wklrrayspg vqeyveaatf
       61 fkfcqtgtll nldeinasll slsdpslepl qinlldyllg ladltgelmr laigrisdge
      121 veysericqf vrdiyreltl lvplmddgsd mktkmdtmlq svvkienacf svrvrgseyi
      181 pllgssdpss flvgvsdgel
//
LOCUS       XP_016724601             320 aa            linear   PLN 06-AUG-2024
DEFINITION  D-aminoacyl-tRNA deacylase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724601
VERSION     XP_016724601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..320
                     /product="D-aminoacyl-tRNA deacylase isoform X1"
                     /calculated_mol_wt=34731
     Region          72..314
                     /region_name="tRNA_deacylase"
                     /note="D-aminoacyl-tRNA deacylase; pfam04414"
                     /db_xref="CDD:427935"
     CDS             1..320
                     /gene="LOC107936385"
                     /coded_by="XM_016869112.2:287..1249"
                     /db_xref="GeneID:107936385"
ORIGIN      
        1 mvtivvatts dpasinpaya llampgwlpv papsllqqgi ksfanknvrf lqhdkgivee
       61 ddldrrweea tgeavdevif fskhtavsnr paltvhpigv phlregdvpp qggrpgwaap
      121 pdprigpwlr llkklaqshn lvpefeitle gthhgpitik ptmfleigst deywkrqdaa
      181 kviallvweg lglgggaavg kwgredernk vllgiggghy aprhmdivmk egvwvghlls
      241 gyslpmedps qskengntdg iggtwrqsik vaieatksaf pggdvlahld hksfkgwqkn
      301 aitaylgels ikigkpndfi
//
LOCUS       XP_016724608             313 aa            linear   PLN 06-AUG-2024
DEFINITION  D-aminoacyl-tRNA deacylase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724608
VERSION     XP_016724608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..313
                     /product="D-aminoacyl-tRNA deacylase isoform X2"
                     /calculated_mol_wt=33942
     Region          72..307
                     /region_name="tRNA_deacylase"
                     /note="D-aminoacyl-tRNA deacylase; pfam04414"
                     /db_xref="CDD:427935"
     CDS             1..313
                     /gene="LOC107936385"
                     /coded_by="XM_016869119.2:231..1172"
                     /db_xref="GeneID:107936385"
ORIGIN      
        1 mvtivvatts dpasinpaya llampgwlpv papsllqqgi ksfanknvrf lqhdkgivee
       61 ddldrrweea tgeavdevif fskhtavsnr paltvhpigd vppqggrpgw aappdprigp
      121 wlrllkklaq shnlvpefei tlegthhgpi tikptmflei gstdeywkrq daakviallv
      181 weglglggga avgkwgrede rnkvllgigg ghyaprhmdi vmkegvwvgh llsgyslpme
      241 dpsqskengn tdgiggtwrq sikvaieatk safpggdvla hldhksfkgw qknaitaylg
      301 elsikigkpn dfi
//
LOCUS       XP_040944543             293 aa            linear   PLN 06-AUG-2024
DEFINITION  D-aminoacyl-tRNA deacylase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944543
VERSION     XP_040944543.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088609.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..293
                     /product="D-aminoacyl-tRNA deacylase isoform X3"
                     /calculated_mol_wt=31772
     Region          72..292
                     /region_name="tRNA_deacylase"
                     /note="D-aminoacyl-tRNA deacylase; pfam04414"
                     /db_xref="CDD:427935"
     CDS             1..293
                     /gene="LOC107936385"
                     /coded_by="XM_041088609.1:231..1112"
                     /db_xref="GeneID:107936385"
ORIGIN      
        1 mvtivvatts dpasinpaya llampgwlpv papsllqqgi ksfanknvrf lqhdkgivee
       61 ddldrrweea tgeavdevif fskhtavsnr paltvhpigv phlregdvpp qggrpgwaap
      121 pdprigpwlr llkklaqshn lvpefeitle gthhgpitik ptmfleigst deywkrqdaa
      181 kviallvweg lglgggaavg kwgredernk vllgiggghy aprhmdivmk egvwvghlls
      241 gyslpmedps qskengntdg iggtwrqsik vaieatksaf pggdvlahld hky
//
LOCUS       XP_016724615             518 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724615
VERSION     XP_016724615.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869126.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=57391
     CDS             1..518
                     /gene="LOC107936401"
                     /coded_by="XM_016869126.2:481..2037"
                     /db_xref="GeneID:107936401"
ORIGIN      
        1 mkldseqvlc hstiglksds kpysfidskp fkkkekprds vglnaegfvk ddlnrvmhdi
       61 kgndgdtdpm lylektgdgw paskldcsms vndfsngnek eardfvppns hslknrgsfq
      121 dsvfyldksv mecalpelvv cykesayhvv kdicidegvp tqdkflfdsv vdkksdcnfl
      181 pseedqdskl lkeklesdis mqagsmypee nqmdkdidne rdsnkktisd kctqdislsl
      241 eenepknrip sqcdtedlil srkmtddtmk marddvskel ftlgellsmp elstvkpkam
      301 ssncksdgik qqcfqnskek evmvmpplvs adkesdnsck etilsasapv svaeemdsrk
      361 eeatmfspvt ssslvnevsd dsklaarsia fgfdssalts skdegchnld realetghtp
      421 klediadqps snnlqcgnge ssfsaaglvt glisysgpia ysgslshrsd ssttstrsfa
      481 fpilqsewns spvrmakadr rhyrkhrgwr qgllccrf
//
LOCUS       XP_016724621             518 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724621
VERSION     XP_016724621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869132.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..518
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=57391
     CDS             1..518
                     /gene="LOC107936401"
                     /coded_by="XM_016869132.2:481..2037"
                     /db_xref="GeneID:107936401"
ORIGIN      
        1 mkldseqvlc hstiglksds kpysfidskp fkkkekprds vglnaegfvk ddlnrvmhdi
       61 kgndgdtdpm lylektgdgw paskldcsms vndfsngnek eardfvppns hslknrgsfq
      121 dsvfyldksv mecalpelvv cykesayhvv kdicidegvp tqdkflfdsv vdkksdcnfl
      181 pseedqdskl lkeklesdis mqagsmypee nqmdkdidne rdsnkktisd kctqdislsl
      241 eenepknrip sqcdtedlil srkmtddtmk marddvskel ftlgellsmp elstvkpkam
      301 ssncksdgik qqcfqnskek evmvmpplvs adkesdnsck etilsasapv svaeemdsrk
      361 eeatmfspvt ssslvnevsd dsklaarsia fgfdssalts skdegchnld realetghtp
      421 klediadqps snnlqcgnge ssfsaaglvt glisysgpia ysgslshrsd ssttstrsfa
      481 fpilqsewns spvrmakadr rhyrkhrgwr qgllccrf
//
LOCUS       XP_016724645             462 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724645
VERSION     XP_016724645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=51082
     CDS             1..462
                     /gene="LOC107936401"
                     /coded_by="XM_016869156.2:659..2047"
                     /db_xref="GeneID:107936401"
ORIGIN      
        1 mhdikgndgd tdpmlylekt gdgwpaskld csmsvndfsn gnekeardfv ppnshslknr
       61 gsfqdsvfyl dksvmecalp elvvcykesa yhvvkdicid egvptqdkfl fdsvvdkksd
      121 cnflpseedq dskllkekle sdismqagsm ypeenqmdkd idnerdsnkk tisdkctqdi
      181 slsleenepk nripsqcdte dlilsrkmtd dtmkmarddv skelftlgel lsmpelstvk
      241 pkamssncks dgikqqcfqn skekevmvmp plvsadkesd nscketilsa sapvsvaeem
      301 dsrkeeatmf spvtssslvn evsddsklaa rsiafgfdss altsskdegc hnldrealet
      361 ghtpkledia dqpssnnlqc gngessfsaa glvtglisys gpiaysgsls hrsdssttst
      421 rsfafpilqs ewnsspvrma kadrrhyrkh rgwrqgllcc rf
//
LOCUS       XP_016728850             136 aa            linear   PLN 06-AUG-2024
DEFINITION  protein GOLVEN 6 [Gossypium hirsutum].
ACCESSION   XP_016728850
VERSION     XP_016728850.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873361.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016728850.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="protein GOLVEN 6"
                     /calculated_mol_wt=15117
     CDS             1..136
                     /gene="LOC107939959"
                     /coded_by="XM_016873361.2:162..572"
                     /db_xref="GeneID:107939959"
ORIGIN      
        1 meliggifia vfcfsffalq tpctslqiqr qssseqgkgv elapptvqlp rklrfaeeva
       61 lqgnvaqaqh sisstkkled vkgkakqkee atvhgnrgrr qqwkeggpdl shyltmdysn
      121 vrrrrpihnk sfpvap
//
LOCUS       XP_016724666             830 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g13630
            [Gossypium hirsutum].
ACCESSION   XP_016724666
VERSION     XP_016724666.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869177.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724666.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g13630"
                     /calculated_mol_wt=94401
     Region          187..>348
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..316
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          307..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>701
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          340..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..614
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          620..649
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <630..>819
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          655..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          725..754
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107936434"
                     /coded_by="XM_016869177.2:199..2691"
                     /db_xref="GeneID:107936434"
ORIGIN      
        1 mlnkwkpfsf lakphfcsll ssltffkpsv svarlveeep slshspkdpv seilsglkkm
       61 gfrrflagdy frnvvlsldq lqvdkiinsl rvespdfavv ffdlmrneyw frhsrfsrfv
      121 vahvlagqrr hkelrfvveq mlkeegsgsa pslcelllng frdwdqkslv wdmlafvysr
      181 femvhdalyv lakmkdlklr asiltynsll ynlrhayimw dvyneikvag atqskqtnsi
      241 vidglcsqsk lqdavsflre teakglgpsv vslntimsry cklgftdvak sffcmmlkyg
      301 llpdvysyni lihglciags meealeftsd mekhgvepdi vtynilmkgf dllgqmggaw
      361 mviqrmldkg lnpdvvtymm licghcqngn veeglklqee mlsrgfqlsa lsysvllssl
      421 ckigqvheal vlfyemenhg vepdhitysi lihglckqge vqsalllyke mcsksippns
      481 hsagaillsl ckngmvlear myfdslvmnd sahdivlyni midgyvkhgn leeavelyrl
      541 itekgitptt vtfnsliygf ckrrnftear rlmetirllg leptavtytt lmnayckngn
      601 lrcmmellqe mhancirpth vtytviikgl ckqqklqeav qlledmrikg lnpdqvtynt
      661 iiqcfckarn iktafkllne mwlnnleptp vtysilingl cvygnlkdan kllislheqn
      721 ikltrvgytq iikahcmkgd vhcaftffhl mmemgfeisi kdytalinrl ckrcliteaq
      781 qffsimlfhg ispdqeicea llnayqqcgd iisgyqmlal tikagllprr
//
LOCUS       XP_016724653             830 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g13630
            [Gossypium hirsutum].
ACCESSION   XP_016724653
VERSION     XP_016724653.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724653.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g13630"
                     /calculated_mol_wt=94401
     Region          187..>348
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..316
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          307..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>701
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          340..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..614
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          620..649
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <630..>819
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          655..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          725..754
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107936434"
                     /coded_by="XM_016869164.2:228..2720"
                     /db_xref="GeneID:107936434"
ORIGIN      
        1 mlnkwkpfsf lakphfcsll ssltffkpsv svarlveeep slshspkdpv seilsglkkm
       61 gfrrflagdy frnvvlsldq lqvdkiinsl rvespdfavv ffdlmrneyw frhsrfsrfv
      121 vahvlagqrr hkelrfvveq mlkeegsgsa pslcelllng frdwdqkslv wdmlafvysr
      181 femvhdalyv lakmkdlklr asiltynsll ynlrhayimw dvyneikvag atqskqtnsi
      241 vidglcsqsk lqdavsflre teakglgpsv vslntimsry cklgftdvak sffcmmlkyg
      301 llpdvysyni lihglciags meealeftsd mekhgvepdi vtynilmkgf dllgqmggaw
      361 mviqrmldkg lnpdvvtymm licghcqngn veeglklqee mlsrgfqlsa lsysvllssl
      421 ckigqvheal vlfyemenhg vepdhitysi lihglckqge vqsalllyke mcsksippns
      481 hsagaillsl ckngmvlear myfdslvmnd sahdivlyni midgyvkhgn leeavelyrl
      541 itekgitptt vtfnsliygf ckrrnftear rlmetirllg leptavtytt lmnayckngn
      601 lrcmmellqe mhancirpth vtytviikgl ckqqklqeav qlledmrikg lnpdqvtynt
      661 iiqcfckarn iktafkllne mwlnnleptp vtysilingl cvygnlkdan kllislheqn
      721 ikltrvgytq iikahcmkgd vhcaftffhl mmemgfeisi kdytalinrl ckrcliteaq
      781 qffsimlfhg ispdqeicea llnayqqcgd iisgyqmlal tikagllprr
//
LOCUS       XP_016724659             830 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g13630
            [Gossypium hirsutum].
ACCESSION   XP_016724659
VERSION     XP_016724659.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869170.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724659.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g13630"
                     /calculated_mol_wt=94401
     Region          187..>348
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..316
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          307..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>701
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          340..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..614
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          620..649
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <630..>819
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          655..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          725..754
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107936434"
                     /coded_by="XM_016869170.2:199..2691"
                     /db_xref="GeneID:107936434"
ORIGIN      
        1 mlnkwkpfsf lakphfcsll ssltffkpsv svarlveeep slshspkdpv seilsglkkm
       61 gfrrflagdy frnvvlsldq lqvdkiinsl rvespdfavv ffdlmrneyw frhsrfsrfv
      121 vahvlagqrr hkelrfvveq mlkeegsgsa pslcelllng frdwdqkslv wdmlafvysr
      181 femvhdalyv lakmkdlklr asiltynsll ynlrhayimw dvyneikvag atqskqtnsi
      241 vidglcsqsk lqdavsflre teakglgpsv vslntimsry cklgftdvak sffcmmlkyg
      301 llpdvysyni lihglciags meealeftsd mekhgvepdi vtynilmkgf dllgqmggaw
      361 mviqrmldkg lnpdvvtymm licghcqngn veeglklqee mlsrgfqlsa lsysvllssl
      421 ckigqvheal vlfyemenhg vepdhitysi lihglckqge vqsalllyke mcsksippns
      481 hsagaillsl ckngmvlear myfdslvmnd sahdivlyni midgyvkhgn leeavelyrl
      541 itekgitptt vtfnsliygf ckrrnftear rlmetirllg leptavtytt lmnayckngn
      601 lrcmmellqe mhancirpth vtytviikgl ckqqklqeav qlledmrikg lnpdqvtynt
      661 iiqcfckarn iktafkllne mwlnnleptp vtysilingl cvygnlkdan kllislheqn
      721 ikltrvgytq iikahcmkgd vhcaftffhl mmemgfeisi kdytalinrl ckrcliteaq
      781 qffsimlfhg ispdqeicea llnayqqcgd iisgyqmlal tikagllprr
//
LOCUS       XP_040944544             830 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g13630
            [Gossypium hirsutum].
ACCESSION   XP_040944544
VERSION     XP_040944544.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088610.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g13630"
                     /calculated_mol_wt=94401
     Region          187..>348
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..316
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          307..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>701
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          340..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..614
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          620..649
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <630..>819
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          655..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          725..754
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107936434"
                     /coded_by="XM_041088610.1:199..2691"
                     /db_xref="GeneID:107936434"
ORIGIN      
        1 mlnkwkpfsf lakphfcsll ssltffkpsv svarlveeep slshspkdpv seilsglkkm
       61 gfrrflagdy frnvvlsldq lqvdkiinsl rvespdfavv ffdlmrneyw frhsrfsrfv
      121 vahvlagqrr hkelrfvveq mlkeegsgsa pslcelllng frdwdqkslv wdmlafvysr
      181 femvhdalyv lakmkdlklr asiltynsll ynlrhayimw dvyneikvag atqskqtnsi
      241 vidglcsqsk lqdavsflre teakglgpsv vslntimsry cklgftdvak sffcmmlkyg
      301 llpdvysyni lihglciags meealeftsd mekhgvepdi vtynilmkgf dllgqmggaw
      361 mviqrmldkg lnpdvvtymm licghcqngn veeglklqee mlsrgfqlsa lsysvllssl
      421 ckigqvheal vlfyemenhg vepdhitysi lihglckqge vqsalllyke mcsksippns
      481 hsagaillsl ckngmvlear myfdslvmnd sahdivlyni midgyvkhgn leeavelyrl
      541 itekgitptt vtfnsliygf ckrrnftear rlmetirllg leptavtytt lmnayckngn
      601 lrcmmellqe mhancirpth vtytviikgl ckqqklqeav qlledmrikg lnpdqvtynt
      661 iiqcfckarn iktafkllne mwlnnleptp vtysilingl cvygnlkdan kllislheqn
      721 ikltrvgytq iikahcmkgd vhcaftffhl mmemgfeisi kdytalinrl ckrcliteaq
      781 qffsimlfhg ispdqeicea llnayqqcgd iisgyqmlal tikagllprr
//
LOCUS       XP_040944545             830 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g13630
            [Gossypium hirsutum].
ACCESSION   XP_040944545
VERSION     XP_040944545.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088611.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g13630"
                     /calculated_mol_wt=94401
     Region          187..>348
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..316
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          307..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>701
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          340..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..614
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          620..649
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <630..>819
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          655..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          725..754
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107936434"
                     /coded_by="XM_041088611.1:199..2691"
                     /db_xref="GeneID:107936434"
ORIGIN      
        1 mlnkwkpfsf lakphfcsll ssltffkpsv svarlveeep slshspkdpv seilsglkkm
       61 gfrrflagdy frnvvlsldq lqvdkiinsl rvespdfavv ffdlmrneyw frhsrfsrfv
      121 vahvlagqrr hkelrfvveq mlkeegsgsa pslcelllng frdwdqkslv wdmlafvysr
      181 femvhdalyv lakmkdlklr asiltynsll ynlrhayimw dvyneikvag atqskqtnsi
      241 vidglcsqsk lqdavsflre teakglgpsv vslntimsry cklgftdvak sffcmmlkyg
      301 llpdvysyni lihglciags meealeftsd mekhgvepdi vtynilmkgf dllgqmggaw
      361 mviqrmldkg lnpdvvtymm licghcqngn veeglklqee mlsrgfqlsa lsysvllssl
      421 ckigqvheal vlfyemenhg vepdhitysi lihglckqge vqsalllyke mcsksippns
      481 hsagaillsl ckngmvlear myfdslvmnd sahdivlyni midgyvkhgn leeavelyrl
      541 itekgitptt vtfnsliygf ckrrnftear rlmetirllg leptavtytt lmnayckngn
      601 lrcmmellqe mhancirpth vtytviikgl ckqqklqeav qlledmrikg lnpdqvtynt
      661 iiqcfckarn iktafkllne mwlnnleptp vtysilingl cvygnlkdan kllislheqn
      721 ikltrvgytq iikahcmkgd vhcaftffhl mmemgfeisi kdytalinrl ckrcliteaq
      781 qffsimlfhg ispdqeicea llnayqqcgd iisgyqmlal tikagllprr
//
LOCUS       XP_040944546             830 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g13630
            [Gossypium hirsutum].
ACCESSION   XP_040944546
VERSION     XP_040944546.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088612.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g13630"
                     /calculated_mol_wt=94401
     Region          187..>348
                     /region_name="PPR_long"
                     /note="Pentacotripeptide-repeat region of PRORP;
                     pfam17177"
                     /db_xref="CDD:407303"
     Region          237..264
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..316
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          307..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <319..>701
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          340..369
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          375..404
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          447..474
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          517..544
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          550..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          587..614
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          620..649
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <630..>819
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          655..681
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          725..754
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          760..787
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107936434"
                     /coded_by="XM_041088612.1:199..2691"
                     /db_xref="GeneID:107936434"
ORIGIN      
        1 mlnkwkpfsf lakphfcsll ssltffkpsv svarlveeep slshspkdpv seilsglkkm
       61 gfrrflagdy frnvvlsldq lqvdkiinsl rvespdfavv ffdlmrneyw frhsrfsrfv
      121 vahvlagqrr hkelrfvveq mlkeegsgsa pslcelllng frdwdqkslv wdmlafvysr
      181 femvhdalyv lakmkdlklr asiltynsll ynlrhayimw dvyneikvag atqskqtnsi
      241 vidglcsqsk lqdavsflre teakglgpsv vslntimsry cklgftdvak sffcmmlkyg
      301 llpdvysyni lihglciags meealeftsd mekhgvepdi vtynilmkgf dllgqmggaw
      361 mviqrmldkg lnpdvvtymm licghcqngn veeglklqee mlsrgfqlsa lsysvllssl
      421 ckigqvheal vlfyemenhg vepdhitysi lihglckqge vqsalllyke mcsksippns
      481 hsagaillsl ckngmvlear myfdslvmnd sahdivlyni midgyvkhgn leeavelyrl
      541 itekgitptt vtfnsliygf ckrrnftear rlmetirllg leptavtytt lmnayckngn
      601 lrcmmellqe mhancirpth vtytviikgl ckqqklqeav qlledmrikg lnpdqvtynt
      661 iiqcfckarn iktafkllne mwlnnleptp vtysilingl cvygnlkdan kllislheqn
      721 ikltrvgytq iikahcmkgd vhcaftffhl mmemgfeisi kdytalinrl ckrcliteaq
      781 qffsimlfhg ispdqeicea llnayqqcgd iisgyqmlal tikagllprr
//
LOCUS       XP_016724674             384 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha/beta hydrolase domain-containing protein 17B [Gossypium
            hirsutum].
ACCESSION   XP_016724674
VERSION     XP_016724674.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724674.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="alpha/beta hydrolase domain-containing protein
                     17B"
                     /calculated_mol_wt=43358
     Region          29..261
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     Region          266..>361
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     CDS             1..384
                     /gene="LOC107936456"
                     /coded_by="XM_016869185.2:632..1786"
                     /db_xref="GeneID:107936456"
ORIGIN      
        1 mgtatssmaa kfaffppnpp synitvdeas gkmrfsdvny qrdnvdvlkl stkrgneiva
       61 myvknpsasl tvlyshgnaa digqmyhift elsvhlnvnl mgydysgygq ssgkpseqdt
      121 yadieaankc leemygikqe dtilygqsvg sgpalelair lphlravilh spilsglrvm
      181 ypvkrtlwfd iyknidkipl vdcpvlvihg tedevvnfsh gkqlwelcke kyeplwlkgg
      241 nhcdlelype ylrhlrkfis aieklqrprd apdlkpkdqt eqasnnvteq skeksrpsid
      301 yrekgrpsfg hreksrlstd srdkarasid kreksrksid rsfkarnstd hserarnsfd
      361 rlgdmvrsvg lcnvdclkqt aaev
//
LOCUS       XP_016724686             790 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock protein 90-5, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016724686
VERSION     XP_016724686.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724686.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..790
                     /product="heat shock protein 90-5, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=90028
     Region          75..741
                     /region_name="PRK05218"
                     /note="heat shock protein 90; Provisional"
                     /db_xref="CDD:235366"
     CDS             1..790
                     /gene="LOC107936466"
                     /coded_by="XM_016869197.2:265..2637"
                     /db_xref="GeneID:107936466"
ORIGIN      
        1 mapvlsrsla tpslaslplt npnkafnlrt aflppnalnk afscsrlrwk lekrnnriav
       61 rceasavaek eaeetsgekf eyqaevsrll dlivhslysh kevflrelvs nasdaldklr
      121 flsvtepsll gesgeleiri kpdpdngtit itdtgigmtk eelidclgti aqsgtskflk
      181 alkenkdlga dngligqfgv gfysaflvae kvvvstkspk sdkqyvweav adsssyvire
      241 etdpenilvr gtqitlylrs ddkyefsdpt riqnlvknys qfvsfpiytw qeksrtveve
      301 eeeppkegee npeevkkkkt tktekywdwe lanetkpiwm rnpkevekde ynefykktfn
      361 efldplgyth fttegevefr svlyipsmgp lnnedvvnpk tknirlyvkr vfisddfdge
      421 lfprylsfvk gvvdsddlpl nvsreilqes rivrimrkrl vrktfdmiqe isesenkedy
      481 kkfwenfgrf lklgciedsg nhkritpllr fytskseeel tsldeyvenm denqkaiyyl
      541 atdslksakt apfleklvqk dievlylvep idevaiqnlq tykekkfvdi skedlelgde
      601 devkeretkq efnllcdwik qqlgdkvakv qiskrlsssp cvlvsgkfgw sanmerlmka
      661 qalgdtasle fmrgrrilei npdhpiikdl naacknapes seakravdll ydtalissgf
      721 spdspaelgn kiyemmamal ggrwgryedd deveasevsa aetdtsasea senqviepse
      781 vrtesdpwqd
//
LOCUS       XP_016724692             743 aa            linear   PLN 06-AUG-2024
DEFINITION  heat shock protein 90-5, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016724692
VERSION     XP_016724692.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724692.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..743
                     /product="heat shock protein 90-5, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=84631
     Region          75..694
                     /region_name="PRK05218"
                     /note="heat shock protein 90; Provisional"
                     /db_xref="CDD:235366"
     CDS             1..743
                     /gene="LOC107936466"
                     /coded_by="XM_016869203.2:214..2445"
                     /db_xref="GeneID:107936466"
ORIGIN      
        1 mapvlsrsla tpslaslplt npnkafnlrt aflppnalnk afscsrlrwk lekrnnriav
       61 rceasavaek eaeetsgekf eyqaevsrll dlivhslysh kevflrelvs nasdaldklr
      121 flsvtepsll gesgeleiri kpdpdngtit itdtgigmtk eelidclgti aqsgtskflk
      181 alkenkdlga dngligqfgv gfysaflvae kvvvstkspk sdkqyvweav adsssyvire
      241 etdpenilvr gtqitlylrs ddkyefsdpt riqnlvknys qfvsfpiytw qeksrtveve
      301 eeeppkegee npeevkkkkt tktekywdwe lanetkpiwm rnpkevekde ynefykktfn
      361 efldplgyth fttefpryls fvkgvvdsdd lplnvsreil qesrivrimr krlvrktfdm
      421 iqeisesenk edykkfwenf grflklgcie dsgnhkritp llrfytskse eeltsldeyv
      481 enmdenqkai yylatdslks aktapflekl vqkdievlyl vepidevaiq nlqtykekkf
      541 vdiskedlel gdedevkere tkqefnllcd wikqqlgdkv akvqiskrls sspcvlvsgk
      601 fgwsanmerl mkaqalgdta slefmrgrri leinpdhpii kdlnaackna pesseakrav
      661 dllydtalis sgfspdspae lgnkiyemma malggrwgry edddevease vsaaetdtsa
      721 seasenqvie psevrtesdp wqd
//
LOCUS       XP_016724711             530 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724711
VERSION     XP_016724711.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724711.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="transcription factor bHLH49 isoform X1"
                     /calculated_mol_wt=56863
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..530
                     /gene="LOC107936488"
                     /coded_by="XM_016869222.2:623..2215"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq vflhfftrmh grmsstmlfk
//
LOCUS       XP_016724719             530 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724719
VERSION     XP_016724719.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869230.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724719.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="transcription factor bHLH49 isoform X1"
                     /calculated_mol_wt=56863
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..530
                     /gene="LOC107936488"
                     /coded_by="XM_016869230.2:457..2049"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq vflhfftrmh grmsstmlfk
//
LOCUS       XP_016724727             530 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724727
VERSION     XP_016724727.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724727.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="transcription factor bHLH49 isoform X1"
                     /calculated_mol_wt=56863
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..530
                     /gene="LOC107936488"
                     /coded_by="XM_016869238.2:600..2192"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq vflhfftrmh grmsstmlfk
//
LOCUS       XP_016724743             530 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724743
VERSION     XP_016724743.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869254.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724743.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="transcription factor bHLH49 isoform X1"
                     /calculated_mol_wt=56863
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..530
                     /gene="LOC107936488"
                     /coded_by="XM_016869254.2:436..2028"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq vflhfftrmh grmsstmlfk
//
LOCUS       XP_016724735             530 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724735
VERSION     XP_016724735.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869246.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724735.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="transcription factor bHLH49 isoform X1"
                     /calculated_mol_wt=56863
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..530
                     /gene="LOC107936488"
                     /coded_by="XM_016869246.2:343..1935"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq vflhfftrmh grmsstmlfk
//
LOCUS       XP_016724748             530 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724748
VERSION     XP_016724748.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869259.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724748.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..530
                     /product="transcription factor bHLH49 isoform X1"
                     /calculated_mol_wt=56863
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..530
                     /gene="LOC107936488"
                     /coded_by="XM_016869259.2:625..2217"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq vflhfftrmh grmsstmlfk
//
LOCUS       XP_040944548             526 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944548
VERSION     XP_040944548.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088614.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="transcription factor bHLH49 isoform X2"
                     /calculated_mol_wt=56312
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..526
                     /gene="LOC107936488"
                     /coded_by="XM_041088614.1:448..2028"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq hsnawedelh nvvqmn
//
LOCUS       XP_040944549             526 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944549
VERSION     XP_040944549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088615.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="transcription factor bHLH49 isoform X2"
                     /calculated_mol_wt=56312
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..526
                     /gene="LOC107936488"
                     /coded_by="XM_041088615.1:590..2170"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq hsnawedelh nvvqmn
//
LOCUS       XP_040944550             526 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944550
VERSION     XP_040944550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088616.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="transcription factor bHLH49 isoform X2"
                     /calculated_mol_wt=56312
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..526
                     /gene="LOC107936488"
                     /coded_by="XM_041088616.1:298..1878"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq hsnawedelh nvvqmn
//
LOCUS       XP_040944551             526 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944551
VERSION     XP_040944551.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088617.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="transcription factor bHLH49 isoform X2"
                     /calculated_mol_wt=56312
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..526
                     /gene="LOC107936488"
                     /coded_by="XM_041088617.1:427..2007"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq hsnawedelh nvvqmn
//
LOCUS       XP_016724762             526 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724762
VERSION     XP_016724762.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724762.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="transcription factor bHLH49 isoform X2"
                     /calculated_mol_wt=56312
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..526
                     /gene="LOC107936488"
                     /coded_by="XM_016869273.2:618..2198"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq hsnawedelh nvvqmn
//
LOCUS       XP_016724756             526 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH49 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724756
VERSION     XP_016724756.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869267.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724756.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="transcription factor bHLH49 isoform X2"
                     /calculated_mol_wt=56312
     Region          354..439
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(369..370,373..374,376..377,381,399..400)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(379..380,383,386..387,390,400..401,404..405,408,411,
                     414..415,418,421..422,424..425,428,431..432,435,438..439)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..526
                     /gene="LOC107936488"
                     /coded_by="XM_016869267.2:765..2345"
                     /db_xref="GeneID:107936488"
ORIGIN      
        1 mdigekdkye lgkrdehnni nyqapvlssd wqfgganlts agmslvpttn plaigsscas
       61 aslvdsfgss lwehpsnspn mgfcdfsvqn ganssnamei gkglpnslrs sidrpfdmgw
      121 naasamlkgg iflpnttgil aqslsqlpad safieraarf ssfnggnfsd mvnpfgvpep
      181 mglyargvgl mqgpddifav ngmksvsvme sqkskldate atrdaglrve nrakasplen
      241 erkseshmqp neeakqgtgg sgnesdeaei ssrdggqdep saldgtggep sakglsskkr
      301 kkslqdaeid rakggqtstk takdspenqq kqsmminktt gkqgspashp pkeeyihvra
      361 rrgqatnshs laervrreki sermkflqdl vpgcskvtgk avmldeiiny vqslqrqvef
      421 lsmklatvnp rldfsieall akdiiqsrag psstlgfspd lsmgypplhp sqpglvqapl
      481 pvignssdvi hkalssqlts mtgglkepnq hsnawedelh nvvqmn
//
LOCUS       XP_016724773            1723 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYLLO, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724773
VERSION     XP_016724773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869284.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1723
                     /product="protein PHYLLO, chloroplastic isoform X1"
                     /calculated_mol_wt=191434
     Region          67..1705
                     /region_name="PLN02980"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding"
                     /db_xref="CDD:215530"
     CDS             1..1723
                     /gene="LOC107936532"
                     /coded_by="XM_016869284.2:140..5311"
                     /db_xref="GeneID:107936532"
ORIGIN      
        1 mllqrdislp ffaltpkphl knhvfcakka ipfpgrplkn dfvscnlkmv ngarfhgsvk
       61 datgledddl vvetcitrtl ppaltlehgl qsikqaveel kfnppcassg vlrfqvavpp
      121 sakalnwfcs qpessavfpm fflsketisp tckslylnkv rgvfgigaai sftssicipg
      181 glsstkrfls ndsvlmstyg fldinfntdl ssvkhkagsf yffiplield ehedisilaa
      241 tlvwsdsclc tfeqaihsye salyqatshf wptterchse rvrtairkln vvedntvqma
      301 ytngillgrr dfeahtmelr darffkqfcf kfsptigvac nmldhasema ytiqdranin
      361 avwaslivee cfrlgltyfc vapgsrsspl alaasahpfv tciscfders lafhaigyar
      421 gsqkaaviit tsgtavsnlf pavveasedf vpllvlsadr ppelqdcgan qsinqvnhfg
      481 sfvrfffslp pptdqiparm vlttldsavh watsspigpv hincpfrepl ddcpqnwkss
      541 clegldtwrs ntepftkyii vqhsylcnta trgqmeevle kirrvnkgil vvgaisaede
      601 vwavllmaky lqwpvvadil sgirlrells sspeveesil fvdyldhall sdsvrdlvqf
      661 dvivqigsri tsnrisqmle kcfpcsyilv dnhphrhdps hfvthriqss aiefanilmk
      721 aqipnrsrkw hyylqalnmm vgqeisfhls vehslsepyi ahvisealsa esalfignsm
      781 virdadmygc nwtsdnhsva dmmlktelpc tgilvagnrg asgidgllst aigfavgcnk
      841 rvlcvvgdis flhdtnglai lkqrmlrkpm tilvinnrgg aifsllpvad itdprvlnqy
      901 fytshnisih glceahgvkh levktkmelh ealissqkgd tdcvievess idsnatfhsy
      961 irkfacraae halgviskls ppesmsqgch ckiqsisysv yriqlcappt ssalyhdrsi
     1021 fyrdgfilsl tledgsigyg evapleisqe nlldveeqlr flfhvmkgvt inyflpmlks
     1081 sfsswiwktl gipvcslfps vrcglemail naiamshgss llnilyplre rteeksenla
     1141 siricalidc sgtpeevari avdlveegft aikikvarra dpvedaaviq evrkkvgchi
     1201 dlrvdanrnw tyeqaikfgf lvkdynlqyi eepvqhesdi iryceesglp valdetidnc
     1261 penplnllvk ynhhqivalv ikptviggfe kaamiaqwah iqgkmaiisa afesglalsv
     1321 yilfscyldl qnadtcklmn nspassvahg lgtyrwleed ittdplgigr npstgfieas
     1381 vgdathllhk fqmnhnfihr tftgekvlgy lldldsndfs fsvnvqeigq rnnvrnsgst
     1441 ilflhgflgt neewvpimha isgsarcisv dlpghgatki kncgddkaaq rsllsieiia
     1501 dlllkliehv tpdkvtlvgy smgarialym alkfsdkieg avilsgspgl edavarkirr
     1561 akddskarsi vthglqlfln twysgglwks lrshpyfnhi vvrrsvhddl qglarvlsgl
     1621 spgrqpslwe dlkhckvplm lvvgendekf krvalkmwhe ighdrddavs klhqmvvvps
     1681 cghavhlenp lpiirlvrqf vtslrsvklq ekgnvrdlli ynq
//
LOCUS       XP_016724779            1719 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYLLO, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724779
VERSION     XP_016724779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1719
                     /product="protein PHYLLO, chloroplastic isoform X2"
                     /calculated_mol_wt=190978
     Region          67..1701
                     /region_name="PLN02980"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding"
                     /db_xref="CDD:215530"
     CDS             1..1719
                     /gene="LOC107936532"
                     /coded_by="XM_016869290.2:138..5297"
                     /db_xref="GeneID:107936532"
ORIGIN      
        1 mllqrdislp ffaltpkphl knhvfcakka ipfpgrplkn dfvscnlkmv ngarfhgsvk
       61 datgledddl vvetcitrtl ppaltlehgl qsikqaveel kfnppcassg vlrfqvavpp
      121 sakalnwfcs qpessavfpm fflsketisp tckslylnkv rgvfgigaai sftssicipg
      181 glsstkrfls ndsvlmstyg fldinfntdl ssvkhkagsf yffiplield ehedisilaa
      241 tlvwsdsclc tfeqaihsye salyqatshf wptterchse rvrtairkln vvedntvqma
      301 ytngillgrr dfeahtmelr darffkqfcf kfsptigvac nmldhasema ytiqdranin
      361 avwaslivee cfrlgltyfc vapgsrsspl alaasahpfv tciscfders lafhaigyar
      421 gsqkaaviit tsgtavsnlf pavveasedf vpllvlsadr ppelqdcgan qsinqvnhfg
      481 sfvrfffslp pptdqiparm vlttldsavh watsspigpv hincpfrepl ddcpqnwkss
      541 clegldtwrs ntepftkyii vqhsylcnta trgqmeevle kirrvnkgil vvgaisaede
      601 vwavllmaky lqwpvvadil sgirlrells sspeveesil fvdyldhall sdsvrdlvqf
      661 dvivqigsri tsnrisqmle kcfpcsyilv dnhphrhdps hfvthriqss aiefanilmk
      721 aqipnrsrkw hyylqalnmm vgqeisfhls vehslsepyi ahvisealsa esalfignsm
      781 virdadmygc nwtsdnhsva dmmlktelpc tgilvagnrg asgidgllst aigfavgcnk
      841 rvlcvvgdis flhdtnglai lkqrmlrkpm tilvinnrgg aifsllpvad itdprvlnqy
      901 fytshnisih glceahgvkh levktkmelh ealissqkgd tdcvievess idsnatfhsy
      961 irkfacraae halgviskls ppesmsqgch ckiqsisysv yriqlcappt ssalyhdrsi
     1021 fyrdgfilsl tledgsigyg evapleisqe nlldveeqlr flfhvmkgvt inyflpmlks
     1081 sfsswiwktl gipvcslfps vrcglemail naiamshgss llnilyplre rteeksenla
     1141 siricalidc sgtpeevari avdlveegft aikikvarra dpvedaaviq evrkkvgchi
     1201 dlrvdanrnw tyeqaikfgf lvkdynlqyi eepvqhesdi iryceesglp valdetidnc
     1261 penplnllvk ynhhqivalv ikptviggfe kaamiaqwah iqgkmaiisa afesglalsv
     1321 yilfscyldl qnadtcklmn nspassvahg lgtyrwleed ittdplgigr npstgfieas
     1381 vgdathllhk fqmnhnfihr tftgekvlgy lldldsndfs fsvnvqeigq rnngstilfl
     1441 hgflgtneew vpimhaisgs arcisvdlpg hgatkikncg ddkaaqrsll sieiiadlll
     1501 kliehvtpdk vtlvgysmga rialymalkf sdkiegavil sgspgledav arkirrakdd
     1561 skarsivthg lqlflntwys gglwkslrsh pyfnhivvrr svhddlqgla rvlsglspgr
     1621 qpslwedlkh ckvplmlvvg endekfkrva lkmwheighd rddavsklhq mvvvpscgha
     1681 vhlenplpii rlvrqfvtsl rsvklqekgn vrdlliynq
//
LOCUS       XP_040944552            1671 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYLLO, chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944552
VERSION     XP_040944552.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088618.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1671
                     /product="protein PHYLLO, chloroplastic isoform X3"
                     /calculated_mol_wt=185385
     Region          67..1653
                     /region_name="PLN02980"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding"
                     /db_xref="CDD:215530"
     CDS             1..1671
                     /gene="LOC107936532"
                     /coded_by="XM_041088618.1:143..5158"
                     /db_xref="GeneID:107936532"
ORIGIN      
        1 mllqrdislp ffaltpkphl knhvfcakka ipfpgrplkn dfvscnlkmv ngarfhgsvk
       61 datgledddl vvetcitrtl ppaltlehgl qsikqaveel kfnppcassg vlrfqvavpp
      121 sakalnwfcs qpessavfpm fflsketisp tckslylnkv rgvfgigaai sftssicipg
      181 glsstkrfls ndsvlmstyg fldinfntdl ssvkhkagsf yffiplield ehedisilaa
      241 tlvwsdsclc tfeqaihsye salyqatshf wptterchse rvrtairkln vvedntvqma
      301 ytngillgrr dfeahtmelr darffkqfcf kfsptigvac nmldhasema ytiqdranin
      361 avwaslivee cfrlgltyfc vapgsrsspl alaasahpfv tciscfders lafhaigyar
      421 gsqkaaviit tsgtavsnlf pavveasedf vpllvlsadr ppelqdcgan qsinqvnhfg
      481 sfvrfffslp pptdqiparm vlttldsavh watsspigpv hincpfrepl ddcpqnwkss
      541 clegldtwrs ntepftkyii vqhsylcnta trgqmeevle kirrvnkgil vvgaisaede
      601 vwavllmaky lqwpvvadil sgirlrells sspeveesil fvdyldhall sdsvrdlvqf
      661 dvivqigsri tsnrisqmle kcfpcsyilv dnhphrhdps hfvthriqss aiefanilmk
      721 aqipnrsrkw hyylqalnmm vgqeisfhls vehslsepyi ahvisealsa esalfignsm
      781 virdadmygc nwtsdnhsva dmmlktelpc tgilvagnrg asgidgllst aigfavgcnk
      841 rvlcvvgdis flhdtnglai lkqrmlrkpm tilvinnrgg aifsllpvad itdprvlnqy
      901 fytshnisih glceahgvkh levktkmelh ealissqkgd tdcvievess idsnatfhsy
      961 irkfacraae halgviskls ppesmsqgch ckiqsisysv yriqlcappt ssalyhdrsi
     1021 fyrdgfilsl tledgsigyg evcslfpsvr cglemailna iamshgssll nilyplrert
     1081 eeksenlasi ricalidcsg tpeevariav dlveegftai kikvarradp vedaaviqev
     1141 rkkvgchidl rvdanrnwty eqaikfgflv kdynlqyiee pvqhesdiir yceesglpva
     1201 ldetidncpe nplnllvkyn hhqivalvik ptviggfeka amiaqwahiq gkmaiisaaf
     1261 esglalsvyi lfscyldlqn adtcklmnns passvahglg tyrwleedit tdplgigrnp
     1321 stgfieasvg dathllhkfq mnhnfihrtf tgekvlgyll dldsndfsfs vnvqeigqrn
     1381 nvrnsgstil flhgflgtne ewvpimhais gsarcisvdl pghgatkikn cgddkaaqrs
     1441 llsieiiadl llkliehvtp dkvtlvgysm garialymal kfsdkiegav ilsgspgled
     1501 avarkirrak ddskarsivt hglqlflntw ysgglwkslr shpyfnhivv rrsvhddlqg
     1561 larvlsglsp grqpslwedl khckvplmlv vgendekfkr valkmwheig hdrddavskl
     1621 hqmvvvpscg havhlenplp iirlvrqfvt slrsvklqek gnvrdlliyn q
//
LOCUS       XP_016724787            1528 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PHYLLO, chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016724787
VERSION     XP_016724787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1528
                     /product="protein PHYLLO, chloroplastic isoform X4"
                     /calculated_mol_wt=170237
     Region          1..1510
                     /region_name="PLN02980"
                     /note="2-oxoglutarate decarboxylase/ hydro-lyase/
                     magnesium ion binding / thiamin pyrophosphate binding"
                     /db_xref="CDD:215530"
     CDS             1..1528
                     /gene="LOC107936532"
                     /coded_by="XM_016869298.2:160..4746"
                     /db_xref="GeneID:107936532"
ORIGIN      
        1 mstygfldin fntdlssvkh kagsfyffip lieldehedi silaatlvws dsclctfeqa
       61 ihsyesalyq atshfwptte rchservrta irklnvvedn tvqmaytngi llgrrdfeah
      121 tmelrdarff kqfcfkfspt igvacnmldh asemaytiqd raninavwas liveecfrlg
      181 ltyfcvapgs rssplalaas ahpfvtcisc fderslafha igyargsqka aviittsgta
      241 vsnlfpavve asedfvpllv lsadrppelq dcganqsinq vnhfgsfvrf ffslppptdq
      301 iparmvlttl dsavhwatss pigpvhincp freplddcpq nwkssclegl dtwrsntepf
      361 tkyiivqhsy lcntatrgqm eevlekirrv nkgilvvgai saedevwavl lmakylqwpv
      421 vadilsgirl rellssspev eesilfvdyl dhallsdsvr dlvqfdvivq igsritsnri
      481 sqmlekcfpc syilvdnhph rhdpshfvth riqssaiefa nilmkaqipn rsrkwhyylq
      541 alnmmvgqei sfhlsvehsl sepyiahvis ealsaesalf ignsmvirda dmygcnwtsd
      601 nhsvadmmlk telpctgilv agnrgasgid gllstaigfa vgcnkrvlcv vgdisflhdt
      661 nglailkqrm lrkpmtilvi nnrggaifsl lpvaditdpr vlnqyfytsh nisihglcea
      721 hgvkhlevkt kmelhealis sqkgdtdcvi evessidsna tfhsyirkfa craaehalgv
      781 isklsppesm sqgchckiqs isysvyriql capptssaly hdrsifyrdg filsltledg
      841 sigygevapl eisqenlldv eeqlrflfhv mkgvtinyfl pmlkssfssw iwktlgipvc
      901 slfpsvrcgl emailnaiam shgssllnil yplrerteek senlasiric alidcsgtpe
      961 evariavdlv eegftaikik varradpved aaviqevrkk vgchidlrvd anrnwtyeqa
     1021 ikfgflvkdy nlqyieepvq hesdiiryce esglpvalde tidncpenpl nllvkynhhq
     1081 ivalvikptv iggfekaami aqwahiqgkm aiisaafesg lalsvyilfs cyldlqnadt
     1141 cklmnnspas svahglgtyr wleedittdp lgigrnpstg fieasvgdat hllhkfqmnh
     1201 nfihrtftge kvlgylldld sndfsfsvnv qeigqrnnvr nsgstilflh gflgtneewv
     1261 pimhaisgsa rcisvdlpgh gatkikncgd dkaaqrslls ieiiadlllk liehvtpdkv
     1321 tlvgysmgar ialymalkfs dkiegavils gspgledava rkirrakdds karsivthgl
     1381 qlflntwysg glwkslrshp yfnhivvrrs vhddlqglar vlsglspgrq pslwedlkhc
     1441 kvplmlvvge ndekfkrval kmwheighdr ddavsklhqm vvvpscghav hlenplpiir
     1501 lvrqfvtslr svklqekgnv rdlliynq
//
LOCUS       XP_016724798             355 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc transporter 7 [Gossypium hirsutum].
ACCESSION   XP_016724798
VERSION     XP_016724798.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724798.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..355
                     /product="zinc transporter 7"
                     /calculated_mol_wt=38299
     Region          31..355
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; cl00437"
                     /db_xref="CDD:444905"
     CDS             1..355
                     /gene="LOC107936556"
                     /coded_by="XM_016869309.2:75..1142"
                     /db_xref="GeneID:107936556"
ORIGIN      
        1 mksvlkslvn siflvlfiif ssstplvlaq ceaetktngc hnyresmklk iiaivaills
       61 smigvclplf sgqfpslkpd rdlftivkaf asgvilatgy mhvlpdsfnd lmsgclpenp
      121 wrkfpfttfv amlsavltlm vdsfamsvyk krcgkalmvd annggglent nvvpidnfeh
      181 ghshslemnd dvssqllrhr vitqvlelgi vvhsvvigla mgasgnqcti rsliaalcfh
      241 qmfegmglgg cilqaeyeik mkaimvfffs attplgivlg iglskvyset sptslmvvgl
      301 lnacsaglln ymalvdllaa dflgpklqtn mklqawsyva vllgagfmsl makwa
//
LOCUS       XP_016728859             194 aa            linear   PLN 06-AUG-2024
DEFINITION  basic leucine zipper 43 [Gossypium hirsutum].
ACCESSION   XP_016728859
VERSION     XP_016728859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016873370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..194
                     /product="basic leucine zipper 43"
                     /calculated_mol_wt=22145
     Region          83..134
                     /region_name="bZIP_plant_GBF1"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; cd14702"
                     /db_xref="CDD:269850"
     Region          83..134
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269850"
     Site            order(86..87,89..91,93..98,100..102)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     Site            order(101,104..105,108..109,111..112,115..116,118..119,
                     122..123,125..126,129..130,132..133)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269850"
     CDS             1..194
                     /gene="LOC107939969"
                     /coded_by="XM_016873370.2:93..677"
                     /db_xref="GeneID:107939969"
ORIGIN      
        1 mapgelaglh ylapenpiln panlgmmqnt ipafhfnrfl nslpnfnilp paheftaqss
       61 sisnystsde aeehqvniid erkqrrmisn resarrsrmr kqkhldelwc qvirlrnenh
      121 slidklnhvs echdlvlqen aklkeeasdl rqmltdlkig spylkeleev pcntahlrae
      181 stnqsiansv dflh
//
LOCUS       XP_016724810              79 aa            linear   PLN 06-AUG-2024
DEFINITION  phytosulfokines [Gossypium hirsutum].
ACCESSION   XP_016724810
VERSION     XP_016724810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869321.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..79
                     /product="phytosulfokines"
                     /calculated_mol_wt=8931
     Region          <47..76
                     /region_name="PSK"
                     /note="Phytosulfokine precursor protein (PSK); pfam06404"
                     /db_xref="CDD:399419"
     CDS             1..79
                     /gene="LOC107936566"
                     /coded_by="XM_016869321.2:274..513"
                     /db_xref="GeneID:107936566"
ORIGIN      
        1 makrfiflim aflllftaqc rhlstsikqq vdipkipfss pewssideec kgldedaclv
       61 krslaahtdy iytqqnivp
//
LOCUS       XP_016724824             270 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724824
VERSION     XP_016724824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..270
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29734
     CDS             1..270
                     /gene="LOC107936574"
                     /coded_by="XM_016869335.2:256..1068"
                     /db_xref="GeneID:107936574"
ORIGIN      
        1 medviteipp psrffqedln nfifpspsla spflvfsipk pekplrpsll ivalsspsly
       61 ifhhlspktl vgslilpevp fsglsvepsf rdktcniysl nngdkstllv svqhgvsaer
      121 shlvarllig edivpdrlli ldsiqsqnfr gklspdetya fkletlaerk glggsnvass
      181 llkgldyfps gsmidglaaa llsrcqlkkt kgtlcvswpe fcssvvalir sllqrnvlps
      241 ldlsltqemq dqcarfnlik hqpydtemyt
//
LOCUS       XP_016724835             335 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 11 [Gossypium hirsutum].
ACCESSION   XP_016724835
VERSION     XP_016724835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..335
                     /product="peroxidase 11"
                     /calculated_mol_wt=36622
     Region          28..333
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(57,60..61,63..64,67..68,100,102,166..169,175,179,
                     189,192..193,195..196,198..202,204..205,249,272,274,309)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(57,60..61,63..64,67,96,100,102,166..168,175,179,189,
                     192..193,195..196,198..202,205,249,272,274,309)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(64,94..95,166..169,202,204..205)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(69,72,76,78,197,250,253,256,258)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..335
                     /gene="LOC107936581"
                     /coded_by="XM_016869346.2:275..1282"
                     /db_xref="GeneID:107936581"
ORIGIN      
        1 maislqcflf licisifsst maatdppltl nyykstcpnv fdivkkemec hvlsdprnaa
       61 fvlrlhfhdc fvqgcdgsil lddtielqge kkastnglns lkgfriidki knklesecpg
      121 ivscadilti aardavilvg gpywhvpvgr kdsktasydl amenipsane gllsiiakfl
      181 yqglsvtdmv alsgahtigm arcesfrari ygdfeatsgk npisdsylse lrsvcpaiig
      241 sgdnnvtamd nvtpnlfdns fyhtllrgeg llnsdqelys slfgietksl vqkyaadpva
      301 ffnqfsdsmv klgnitnsys fvngevrknc rfvnt
//
LOCUS       XP_016724844             249 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NSP-INTERACTING KINASE 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016724844
VERSION     XP_016724844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869355.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..249
                     /product="protein NSP-INTERACTING KINASE 2 isoform X1"
                     /calculated_mol_wt=26668
     Region          8..>195
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          98..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          146..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..249
                     /gene="LOC107936592"
                     /coded_by="XM_016869355.2:195..944"
                     /db_xref="GeneID:107936592"
ORIGIN      
        1 mnirteisvl vcclvffcls tsgspsngvg sevialmgik sflvdpigvl enwdeaspdp
       61 cswsmvtcsa dgqviglgap sqglsgvlap signltniqt vllqdnnisg nipseigkls
      121 klqnldlsnn nfcgqipttf shlknleflr ltgnnlsgei paslanltdl hlidlsfnnl
      181 sgkvpifpaq vfniegnpyl ytkgtdkvdk gslpnsskak lnksgifyvi tilmvpyyys
      241 hlwdssffi
//
LOCUS       XP_016724849             193 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NSP-INTERACTING KINASE 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016724849
VERSION     XP_016724849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="protein NSP-INTERACTING KINASE 2 isoform X2"
                     /calculated_mol_wt=20274
     Region          8..>187
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          98..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          146..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..193
                     /gene="LOC107936592"
                     /coded_by="XM_016869360.2:183..764"
                     /db_xref="GeneID:107936592"
ORIGIN      
        1 mnirteisvl vcclvffcls tsgspsngvg sevialmgik sflvdpigvl enwdeaspdp
       61 cswsmvtcsa dgqviglgap sqglsgvlap signltniqt vllqdnnisg nipseigkls
      121 klqnldlsnn nfcgqipttf shlknleflr ltgnnlsgei paslanltdl hlidlsfnnl
      181 sgkvpifpaq vfn
//
LOCUS       XP_016724888             406 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724888
VERSION     XP_016724888.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724888.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44070
     CDS             1..406
                     /gene="LOC107936645"
                     /coded_by="XM_016869399.2:548..1768"
                     /db_xref="GeneID:107936645"
ORIGIN      
        1 mkvrgkavev ynnnnnnidf fqdystssdv vpcrkhpqss sagvcayclk drlinlvcsd
       61 cgeqrlsscs cseiatnprn scaggevgsv grvsfliene nsrdhqvsnp kakstssgnn
      121 tksedvillk rsnsscveik kkngfwrigr ffkkkrdket ncgksvcggd eksdlwvvdy
      181 mgvsrsrslc sfrgggffgs edgsdvmnfs garssisaar ssgvnggllf dperksgfse
      241 aeprrsgfds errdstfmes diaairksgv aggsfmdvdg gfsganrrvf slkesyfngg
      301 ddsgfidlkf dfqaeskgdi psmkkgggvl sgfgsmregg efmpykssgg sventlpmag
      361 ngalsngssy qmtmdergik knrrifkgwr wifkapskld hsredk
//
LOCUS       XP_016724953             524 aa            linear   PLN 06-AUG-2024
DEFINITION  NEDD8-activating enzyme E1 regulatory subunit AXR1 [Gossypium
            hirsutum].
ACCESSION   XP_016724953
VERSION     XP_016724953.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869464.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724953.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..524
                     /product="NEDD8-activating enzyme E1 regulatory subunit
                     AXR1"
                     /calculated_mol_wt=58081
     Region          6..521
                     /region_name="APPBP1_RUB"
                     /note="Ubiquitin activating enzyme (E1) subunit APPBP1.
                     APPBP1 is part of the heterodimeric activating enzyme
                     (E1), specific for the Rub family of ubiquitin-like
                     proteins (Ubls). E1 enzymes are part of a conjugation
                     cascade to attach Ub or Ubls, covalently to...; cd01493"
                     /db_xref="CDD:238770"
     Site            order(6..7,9..15,17,39,42..43,46,62..63,65..67,69,76,87,
                     90..91,153,484,488,492,514)
                     /site_type="other"
                     /note="dimer interaction [polypeptide binding]"
                     /db_xref="CDD:238770"
     CDS             1..524
                     /gene="LOC107936706"
                     /coded_by="XM_016869464.2:108..1682"
                     /db_xref="GeneID:107936706"
ORIGIN      
        1 maepktkydr qlriwgeqgq aalekasicl lncgptgset lknlvlggvg sitivdgskv
       61 efgdlgnnfl vddsslgqsk akcvccflqe lndavkakfi eeypealidt npsffsqftl
      121 vvatqlvees mvkldricrq envmlifars ygltglvric vkehtviesk pdhflddlrl
      181 nnpwpelrgf aeaidlnvqd pvahkhipyv vilvkmadew ktshggtlps treqkrefke
      241 llkarmaatd ednykeaida sfklfapqgi ssdlqqiind scaevgssss dfwvmvaalk
      301 efianeggge vplegsipdm tsstehyvnl qkiyqaksea dylvleervr nilkkigrdp
      361 hsipkatiks fsknarklkv cryrsiedey nnpspaelhk yltdedysia vgfyillrav
      421 dryaanfnhf pgqfdgglde disrlkttav sllndlgcsg ltltedline mcrfgaaelh
      481 avaaiiggia sqeviklitk qfvpmtgtfa fnaidhksql lnlc
//
LOCUS       XP_016724978             505 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 40 [Gossypium hirsutum].
ACCESSION   XP_016724978
VERSION     XP_016724978.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869489.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016724978.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..505
                     /product="protein DETOXIFICATION 40"
                     /calculated_mol_wt=54665
     Region          52..488
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(291,295,323,326,405,409,436,462,466)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..505
                     /gene="LOC107936732"
                     /coded_by="XM_016869489.2:84..1601"
                     /db_xref="GeneID:107936732"
ORIGIN      
        1 meslhenair kplfqsqisd tksestssel edvlsdgnss llerwgkatc ieskllfhla
       61 apavivymin ylmsmstqif sghlgnlela aaslgntgiq vfayglmlgm gsavetlcgq
      121 afgahkydml giylqrsavl ltftgilltl iyvfskpill llgespdias taaifvygli
      181 pqifayalnf piqkflqaqs ivapsayist atlfihllms wvavykmglg llgaslvlsl
      241 swwivvvaqf vyivksdkck ytwngfssqa ftglpgffkl sassavmlcl etwyfqilvl
      301 lagllenpel aldslsicmt isgwvfmisv gfnaaasvrv gnelgaghpk saafsvvivt
      361 vlsfiisvaa aiiimvlrdv isyaftegev vaeavsdlcp llaltlilng vqpvlsgvav
      421 gcgwqtfvay vnvgcyyfvg vplgsllgfy fnlgakgiws gmiggtvmqt lvliwvtfrt
      481 dwkkeveear krmdawevke epllk
//
LOCUS       XP_016724991             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016724991
VERSION     XP_016724991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016869502.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18385
     Region          40..>116
                     /region_name="EBP"
                     /note="EXPERA (EXPanded EBP superfamily); pfam05241"
                     /db_xref="CDD:461600"
     CDS             1..166
                     /gene="LOC107936739"
                     /coded_by="XM_016869502.2:208..708"
                     /db_xref="GeneID:107936739"
ORIGIN      
        1 mgilckvvdm lllvafmvml vagplidaql vlpeatfpev lvrlkqqyae eyqdylmvek
       61 phffvalvwl elifqwplvl lniygilask hwfhttcliy gasvitamta llgelmgsqk
      121 asdklltvys pfmglgvlaf lrglvpnsgk aqtigkrpam arekra
//
LOCUS       XP_040944553             757 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HDG2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944553
VERSION     XP_040944553.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088619.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..757
                     /product="homeobox-leucine zipper protein HDG2 isoform X1"
                     /calculated_mol_wt=82705
     Region          35..168
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          94..149
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          272..496
                     /region_name="START_ArGLABRA2_like"
                     /note="C-terminal lipid-binding START domain of the
                     Arabidopsis homeobox protein GLABRA 2 and related
                     proteins; cd08875"
                     /db_xref="CDD:176884"
     Site            order(300..301,312,333,335,346,350,354,357..358,363..364,
                     391,393..396,399,402,404,406,422,436,438..441,443,455,457,
                     459,461,463,465,471,473..475,477..479,482..483,486)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176884"
     CDS             1..757
                     /gene="LOC107936747"
                     /coded_by="XM_041088619.1:519..2792"
                     /db_xref="GeneID:107936747"
ORIGIN      
        1 mpagvmipar nmpsmitgng svsgygtssg ltlgqqpnnm megqlhplem tqnaseseiv
       61 rmrdeefdst nksgsenhel ggsgddqdpr pnkkkryhrh tqhqiqemea ffkecphpdd
      121 kqrkelgrel gleplqvkfw fqnkrtqmkt qherhentql rteneklrad nmryrealst
      181 ascpncggpt avgqmsfdeh hlrlensrlr eeidrisaia akyvgkpvvn fpllsspapp
      241 rpfdfgsqpv teemygvgdl lrsisapsea dkpmiielav aameelvrma qmgeplwmts
      301 ldgttcmlne eeyirtfpsg igpkptgfkc easkettvvi mnhinlveil mdvnqwstlf
      361 sgivskastl dvlstgvagn yngalqvmta efqvlsplvp tresyyvryc kqhaegtwav
      421 vdvsldtirp sptvrcrrrp sgcliqempn gyskvtwveh vevddggvhn lykqlvssgh
      481 afgarrwvst ldrqcerlas lmasniptgd vgvitnqdgr ksmlklaerm visfcggvsa
      541 stahtwttls gtgaddvrvm trksvddpgr ppgivlsaat sfwlpvspkr vfdflrdehs
      601 rsewdilsng gavqemahia ngrdpgncvs llrvnsanss qsnmlilqes ctdptasfvi
      661 yapvdivamn vvlnggdpdy vallpsgfai lpdgmtvtdv gmadsggssg slltvafqil
      721 vdsvptakls lgsvatvnnl iactverika slscdna
//
LOCUS       XP_040944554             725 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HDG2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944554
VERSION     XP_040944554.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088620.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..725
                     /product="homeobox-leucine zipper protein HDG2 isoform X2"
                     /calculated_mol_wt=79689
     Region          3..136
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          62..117
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          240..464
                     /region_name="START_ArGLABRA2_like"
                     /note="C-terminal lipid-binding START domain of the
                     Arabidopsis homeobox protein GLABRA 2 and related
                     proteins; cd08875"
                     /db_xref="CDD:176884"
     Site            order(268..269,280,301,303,314,318,322,325..326,331..332,
                     359,361..364,367,370,372,374,390,404,406..409,411,423,425,
                     427,429,431,433,439,441..443,445..447,450..451,454)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176884"
     CDS             1..725
                     /gene="LOC107936747"
                     /coded_by="XM_041088620.1:667..2844"
                     /db_xref="GeneID:107936747"
ORIGIN      
        1 mfqqpnnmme gqlhplemtq naseseivrm rdeefdstnk sgsenhelgg sgddqdprpn
       61 kkkryhrhtq hqiqemeaff kecphpddkq rkelgrelgl eplqvkfwfq nkrtqmktqh
      121 erhentqlrt eneklradnm ryrealstas cpncggptav gqmsfdehhl rlensrlree
      181 idrisaiaak yvgkpvvnfp llsspapprp fdfgsqpvte emygvgdllr sisapseadk
      241 pmiielavaa meelvrmaqm geplwmtsld gttcmlneee yirtfpsgig pkptgfkcea
      301 skettvvimn hinlveilmd vnqwstlfsg ivskastldv lstgvagnyn galqvmtaef
      361 qvlsplvptr esyyvryckq haegtwavvd vsldtirpsp tvrcrrrpsg cliqempngy
      421 skvtwvehve vddggvhnly kqlvssghaf garrwvstld rqcerlaslm asniptgdvg
      481 vitnqdgrks mlklaermvi sfcggvsast ahtwttlsgt gaddvrvmtr ksvddpgrpp
      541 givlsaatsf wlpvspkrvf dflrdehsrs ewdilsngga vqemahiang rdpgncvsll
      601 rvnsanssqs nmlilqesct dptasfviya pvdivamnvv lnggdpdyva llpsgfailp
      661 dgmtvtdvgm adsggssgsl ltvafqilvd svptaklslg svatvnnlia ctverikasl
      721 scdna
//
LOCUS       XP_016691007             151 aa            linear   PLN 06-AUG-2024
DEFINITION  vascular-related unknown protein 1 [Gossypium hirsutum].
ACCESSION   XP_016691007
VERSION     XP_016691007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835518.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..151
                     /product="vascular-related unknown protein 1"
                     /calculated_mol_wt=16748
     CDS             1..151
                     /gene="LOC107908311"
                     /coded_by="XM_016835518.2:66..521"
                     /db_xref="GeneID:107908311"
ORIGIN      
        1 meeksitssi rksvgskgtr skefsdeesg wttyfedlsn qpktysstfs cgsslisdaa
       61 tapkishhnh hvsasssspk ppnilrfkqt rtteicedhs ledtasspvn sskgsnfksh
      121 dmnprkreed qihsfpgegn ywfrnisrds d
//
LOCUS       XP_016700516             112 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein arginine N-methyltransferase 1.2 [Gossypium
            hirsutum].
ACCESSION   XP_016700516
VERSION     XP_016700516.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016845027.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..112
                     /product="probable protein arginine N-methyltransferase
                     1.2"
                     /calculated_mol_wt=12663
     CDS             1..112
                     /gene="LOC107915826"
                     /coded_by="XM_016845027.2:11..349"
                     /db_xref="GeneID:107915826"
ORIGIN      
        1 mvlgdasfta pfkliaerdd yihafvayfd vsftkchklm gfstgprsra thwkqtvlyl
       61 edvlticege tiigsmtvas nkknprdvdi mvkyslsgrr cvvsrvqfyk mr
//
LOCUS       XP_040944555              87 aa            linear   PLN 06-AUG-2024
DEFINITION  protein arginine N-methyltransferase 1.1-like [Gossypium hirsutum].
ACCESSION   XP_040944555
VERSION     XP_040944555.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088621.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..87
                     /product="protein arginine N-methyltransferase 1.1-like"
                     /calculated_mol_wt=9596
     Region          33..>87
                     /region_name="COG4076"
                     /note="Predicted RNA methylase [General function
                     prediction only]"
                     /db_xref="CDD:443253"
     CDS             1..87
                     /gene="LOC121214673"
                     /coded_by="XM_041088621.1:168..431"
                     /db_xref="GeneID:121214673"
ORIGIN      
        1 mgepdisffg cdgeddktsa dyyfdsyshf giheemlkdv vrtktyqnvi yrnkflfqnk
       61 vvldvgagtg ilslfcakag aahvyav
//
LOCUS       XP_016693346             576 aa            linear   PLN 06-AUG-2024
DEFINITION  isocitrate lyase-like [Gossypium hirsutum].
ACCESSION   XP_016693346
VERSION     XP_016693346.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837857.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..576
                     /product="isocitrate lyase-like"
                     /calculated_mol_wt=64833
     Region          1..576
                     /region_name="PLN02892"
                     /note="isocitrate lyase"
                     /db_xref="CDD:215482"
     CDS             1..576
                     /gene="LOC107910095"
                     /coded_by="XM_016837857.2:112..1842"
                     /db_xref="GeneID:107910095"
ORIGIN      
        1 maasfsvpsm imeeegryea evaevqawwn serfkltqrq ysardvvalr gnlkqsygsn
       61 emakklwrtl kthqgngtas rtfgaldpvq vtmmakhlds iyvsgwqcss thtttnepgp
      121 dladypydtv pnkvehlffa qqyhdrkqre armsmsreer arspyvdylk piiadgdtgf
      181 ggttatvklc klfvergaag vhiedqssvt kkcghmagkv lvavsehinr lvaarlqfdv
      241 mgvetvlvar tdavaanliq tnvdtrdhqf ilgvtnpnlq gkglasmlae amvagktgve
      301 lqaiedkwla maqlktfses vidainnmni redekrrrmn ewmdhssydk clsneqarei
      361 aerlglknlf wdwdlprtre gfyrfkgsvm aaivrgwafa phvdliwmet sspdlvdcte
      421 faqwvksghp eimlaynlsp sfnwdasgms deqmrdfipr iaklgfcwqf itlagfhada
      481 lvtdifardf arrgmlayve kiqreernng vetlahqkws ganfydrylk tvqggissta
      541 amgkgvteeq fketwtrpga mevanegnmv vakarm
//
LOCUS       XP_040944556             303 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-132 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944556
VERSION     XP_040944556.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088622.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="syntaxin-132 isoform X1"
                     /calculated_mol_wt=34065
     Region          38..241
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          209..275
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(237,244,247)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            240
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..303
                     /gene="LOC107907953"
                     /coded_by="XM_041088622.1:165..1076"
                     /db_xref="GeneID:107907953"
ORIGIN      
        1 mndlltdsfv gdakghrdie mgrqvpgpgs nsdmgmeafn kqiqevekqv eklsgllrkl
       61 kdaneesksv tkasamkaik krmekdidev gkiarnvkar lqainkdnla nrqkpgcekg
      121 tsvdrsrtnv tnamatnfkd lmiefqtlrq kiqdeyrevv errvttvtgt rpdektidrl
      181 ietgnseqif qkaiqeqgrg qilntveeiq erhdavteie kklldlqqiy ldmavvvgaq
      241 geildniesq vnnavdhlqs gtealqtakr lqkksrkcmm isiillliia liivlsilkp
      301 wkk
//
LOCUS       XP_040944557             283 aa            linear   PLN 06-AUG-2024
DEFINITION  syntaxin-132 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944557
VERSION     XP_040944557.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088623.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..283
                     /product="syntaxin-132 isoform X2"
                     /calculated_mol_wt=31850
     Region          18..221
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          189..255
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(217,224,227)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            220
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..283
                     /gene="LOC107907953"
                     /coded_by="XM_041088623.1:196..1047"
                     /db_xref="GeneID:107907953"
ORIGIN      
        1 mgrqvpgpgs nsdmgmeafn kqiqevekqv eklsgllrkl kdaneesksv tkasamkaik
       61 krmekdidev gkiarnvkar lqainkdnla nrqkpgcekg tsvdrsrtnv tnamatnfkd
      121 lmiefqtlrq kiqdeyrevv errvttvtgt rpdektidrl ietgnseqif qkaiqeqgrg
      181 qilntveeiq erhdavteie kklldlqqiy ldmavvvgaq geildniesq vnnavdhlqs
      241 gtealqtakr lqkksrkcmm isiillliia liivlsilkp wkk
//
LOCUS       XP_040944558             328 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxidase 27 [Gossypium hirsutum].
ACCESSION   XP_040944558
VERSION     XP_040944558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088624.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..328
                     /product="peroxidase 27"
                     /calculated_mol_wt=35857
     Region          29..327
                     /region_name="secretory_peroxidase"
                     /note="Horseradish peroxidase and related secretory plant
                     peroxidases; cd00693"
                     /db_xref="CDD:173827"
     Site            order(59,62..63,65..66,69..70,100,102,166..169,175,179,
                     189,192..193,195..196,198..202,204..205,246,269,271,304)
                     /site_type="active"
                     /db_xref="CDD:173827"
     Site            order(59,62..63,65..66,69,98,100,102,166..168,175,179,189,
                     192..193,195..196,198..202,205,246,269,271,304)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(66,96..97,166..169,202,204..205)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173827"
     Site            order(71,74,78,80,197,247,250,253,255)
                     /site_type="other"
                     /note="calcium binding sites [ion binding]"
                     /db_xref="CDD:173827"
     CDS             1..328
                     /gene="LOC121214674"
                     /coded_by="XM_041088624.1:29..1015"
                     /db_xref="GeneID:121214674"
ORIGIN      
        1 mgirqkllsf lfsqlilvlm vsnhsnamgl klgyyhktcp naesiisktt yrfisraptl
       61 aapllrmhfh dcfvrgcdgs vllnstktni sekdanpnqs lrgyhvidav ksaveeacpg
      121 vvscadilal vardsvsmih gpywkvplgr rdgrvsilne vfaelpapfa nitqlkqmfa
      181 akglntkdla vlsgghtigt shclgftnrl ynftgkgdtd psmdpnyivk lkqkckprdt
      241 ttlvemdpgs fktfddayyt lvakrrglfq sdsallddpe tkayvilqas thgstfakdf
      301 aesmvkmgqv gvltgnqgei rkhcalvn
//
LOCUS       XP_016693191             344 aa            linear   PLN 06-AUG-2024
DEFINITION  gibberellin 2-beta-dioxygenase 6 [Gossypium hirsutum].
ACCESSION   XP_016693191
VERSION     XP_016693191.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837702.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693191.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..344
                     /product="gibberellin 2-beta-dioxygenase 6"
                     /calculated_mol_wt=38308
     Region          1..334
                     /region_name="PLN02984"
                     /note="oxidoreductase, 2OG-Fe(II) oxygenase family
                     protein"
                     /db_xref="CDD:215534"
     CDS             1..344
                     /gene="LOC107909975"
                     /coded_by="XM_016837702.2:419..1453"
                     /db_xref="GeneID:107909975"
ORIGIN      
        1 mtnsdpplln hygalfssns pqlddpknrl vieecqlpli dlsglsnhde tvrracvaai
       61 cgassewgff qvlnhgispq lveqmrseqv klfkipferk ascgllnnsy rwgspratcp
      121 kqfswseafh vpltkvsdea cygefislra vmiefaaams klagllgsil tanlghgkev
      181 iknlcdegtc flrlnhypac pispeilglv chtdsdflti lcqdqvgglq lmkdskwvtv
      241 kpnrdalivn igdlfqawsn gvyksvehkv vtnakmerys iayflcpsyd ssigsfkeps
      301 iyrkftfrey rdqvqedvrk tgykvglprf lvsgrgdllt gsme
//
LOCUS       XP_040944559              80 aa            linear   PLN 06-AUG-2024
DEFINITION  gamma aminobutyrate transaminase 1, mitochondrial-like [Gossypium
            hirsutum].
ACCESSION   XP_040944559
VERSION     XP_040944559.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088625.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..80
                     /product="gamma aminobutyrate transaminase 1,
                     mitochondrial-like"
                     /calculated_mol_wt=8554
     Region          <1..>79
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     CDS             1..80
                     /gene="LOC107907968"
                     /coded_by="XM_041088625.1:209..451"
                     /db_xref="GeneID:107907968"
ORIGIN      
        1 mgaggvippp atyfekvqav vkkydilfia nevisafgrl gtmfgympig avmvspqvte
       61 viysqsnklg nfshgftytm
//
LOCUS       XP_016732500             157 aa            linear   PLN 06-AUG-2024
DEFINITION  calmodulin-like protein 7 [Gossypium hirsutum].
ACCESSION   XP_016732500
VERSION     XP_016732500.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016877011.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..157
                     /product="calmodulin-like protein 7"
                     /calculated_mol_wt=17906
     Region          5..148
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..157
                     /gene="LOC107943264"
                     /coded_by="XM_016877011.2:1..474"
                     /db_xref="GeneID:107943264"
ORIGIN      
        1 mddvefkkvf qmfdkngdgr iskeelndsl kklgifipdd kltqmikkid vngdnyvdie
       61 efrelyqsvm ndkdddtnsf yeeedileaf kvfdqngdgy isvdelmsil vslglkegkt
      121 iedckkmimk vdvdgdgrvn flefkqmmkg ggfsafs
//
LOCUS       XP_016694076             830 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g21300 [Gossypium
            hirsutum].
ACCESSION   XP_016694076
VERSION     XP_016694076.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838587.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..830
                     /product="pentatricopeptide repeat-containing protein
                     At4g21300"
                     /calculated_mol_wt=92035
     Region          70..93
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          98..124
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          99..799
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          169..194
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          198..225
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          231..295
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          297..326
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          332..361
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          367..392
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          400..427
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          433..497
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          501..528
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          573..598
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          602..629
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          635..664
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          671..697
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..830
                     /gene="LOC107910649"
                     /coded_by="XM_016838587.2:221..2713"
                     /db_xref="GeneID:107910649"
ORIGIN      
        1 mylknlslvc klcrliitpl kcfhtnshhi pafqlppflq sssialnlhq gkqvhaqlil
       61 ngittanpll lamylrvgsf tdaknlfyrm dlgcikrwnl mirglvkmgs fhfalmfyfk
      121 llgcgvspdn ftfpsvvkac salnnvrcgt lihelimlmg fevnvfvgss linlyvengy
      181 tslarnlfdk lpvrdcvlwn vmlngyvkla eldkaieife emrkgdtkpn evtfaailsv
      241 cgsdgmvnfg tqlhglvvsc gldsnsvvan tllsmyskcg wlsdgrklfd mipqadlvsw
      301 ngmisgyvqn gfmedalclf semissgvkp dsitlssflp avtglgslrk greihgyilr
      361 hgipldvflk salldvylkc ravdtarniy nqstkfdivm ctamisgyvl nglsndalei
      421 frwllkekir pnavtlasvl pactdlaaiq mgkelhasvi kngladrchv gsavidmyak
      481 cgrldlahcv frrlterdsi cwnsmitscs qngkpeeain lfrqmgrtgt kydcvsisaa
      541 lsasanlpal hfgkeihgfm iksslfsdlf aesalidmya kcgnldlaqh vfdmmelkne
      601 vswnsiiaay gnhghlkdcl alfdkmlknk iqpdhvtfla iisacghagk vndgvhhlks
      661 mveeygippr mehyacmvdl lgragrldea fkaiqsmpfs pdagvwgtll gacrnqgnve
      721 laevasrhlf yldpqnsgyy vllsnllada ghwrsvlkvr slmkergvqk vpgyswievn
      781 ntthmfvaad gshpqskhiy sllktlllel kregyvpqly lrmnpkervs
//
LOCUS       XP_016694161             611 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSK SIMULATOR 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694161
VERSION     XP_016694161.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838672.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..611
                     /product="protein PSK SIMULATOR 2 isoform X1"
                     /calculated_mol_wt=67893
     Region          137..193
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          357..440
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..611
                     /gene="LOC107910710"
                     /coded_by="XM_016838672.2:384..2219"
                     /db_xref="GeneID:107910710"
ORIGIN      
        1 mggvcsgatk eptikreqkt tsrglsgklk skkrfskqng nsnslsyang ggldkapqrh
       61 dsgdfglqfs relkpstpak ttaskvshrs sfleragilg leravdvldt lgssmsnlna
      121 gsgfvtglas rgntisilaf evantigkga nllrslseqn iqflkkevlh segvqklvst
      181 nmkellsiaa edkrdeldif srevfrfgdl ckdpqwhnlg ryfskldidn svhkqaraea
      241 emtikeltsl aqhtselyhe lnvldrfeqe yrlkseevea lnlpkrgenl mllqselkqq
      301 rklvrslkkk slwsrtleei meklvdivty mhqaifealg etassvkket pensqklgvc
      361 glalhyanvi hqidniaarp aslprnirdt lyhglpptvk kalrsrlqsi dtkeersise
      421 vkdemektlq wlvpvatntt kahqgfgwvg ewastgnefg rsaavnitlt glqtlyhadk
      481 aktdayvlel vallhhlisl akqrdhgfkp qtfrspfhsk mqqqflslns gtkprkvels
      541 eqdrkllskv sgrrlvpgis ksqefplgkn qgikvwalsr sagnspdrar ksckhsktni
      601 ldvmdgldla t
//
LOCUS       XP_016694163             609 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PSK SIMULATOR 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694163
VERSION     XP_016694163.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838674.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..609
                     /product="protein PSK SIMULATOR 2 isoform X2"
                     /calculated_mol_wt=67662
     Region          137..193
                     /region_name="DUF3475"
                     /note="Domain of unknown function (DUF3475); pfam11961"
                     /db_xref="CDD:432223"
     Region          355..438
                     /region_name="DUF668"
                     /note="Protein of unknown function (DUF668); pfam05003"
                     /db_xref="CDD:428251"
     CDS             1..609
                     /gene="LOC107910710"
                     /coded_by="XM_016838674.2:385..2214"
                     /db_xref="GeneID:107910710"
ORIGIN      
        1 mggvcsgatk eptikreqkt tsrglsgklk skkrfskqng nsnslsyang ggldkapqrh
       61 dsgdfglqfs relkpstpak ttaskvshrs sfleragilg leravdvldt lgssmsnlna
      121 gsgfvtglas rgntisilaf evantigkga nllrslseqn iqflkkevlh segvqklvst
      181 nmkellsiaa edkrdeldif srevfrfgdl ckdpqwhnlg ryfskldidn svhkqaraea
      241 emtikeltsl aqhtselyhe lnvldrfeqe yrlkseevea lnlpkrgenl mllqselkqq
      301 rklvrslkkk slwsrtleei meklvdivty mhqaifealg assvkketpe nsqklgvcgl
      361 alhyanvihq idniaarpas lprnirdtly hglpptvkka lrsrlqsidt keersisevk
      421 demektlqwl vpvatnttka hqgfgwvgew astgnefgrs aavnitltgl qtlyhadkak
      481 tdayvlelva llhhlislak qrdhgfkpqt frspfhskmq qqflslnsgt kprkvelseq
      541 drkllskvsg rrlvpgisks qefplgknqg ikvwalsrsa gnspdrarks ckhsktnild
      601 vmdgldlat
//
LOCUS       XP_016691054             338 aa            linear   PLN 06-AUG-2024
DEFINITION  heat stress transcription factor B-4 [Gossypium hirsutum].
ACCESSION   XP_016691054
VERSION     XP_016691054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835565.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="heat stress transcription factor B-4"
                     /calculated_mol_wt=37951
     Region          22..114
                     /region_name="HSF"
                     /note="heat shock factor; smart00415"
                     /db_xref="CDD:214654"
     CDS             1..338
                     /gene="LOC107908398"
                     /coded_by="XM_016835565.1:1..1017"
                     /db_xref="GeneID:107908398"
ORIGIN      
        1 malvldncee illsldshks vpapfltkty qlvddpttdk ivswgeddtt fvvwgppefa
       61 rdllpnyfkh nnfssfvrql ntygfrkivp drwefgneff kkgekqllcd ihrrktsqpq
      121 eainhhyhsh splvnapsff pfpsrvsisp aasdeqanwc dsprvgtgvs vfggynssia
      181 alsedneklr rrnnlltsel aqmrklyndi iyfvqnhvkh vtpsnpyppn mllcgsqsaa
      241 nssllqkhln qllgyypnst kpaqvqflnt ptaasksslt ileetsrnsc ktkvfgvplh
      301 skkrlhpecg atnsetnkvr lvlenkdlgl nlmppstc
//
LOCUS       XP_016691085             129 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691085
VERSION     XP_016691085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835596.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..129
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15044
     CDS             1..129
                     /gene="LOC107908434"
                     /coded_by="XM_016835596.2:223..612"
                     /db_xref="GeneID:107908434"
ORIGIN      
        1 malqwmilty vvaaeaalal lltfpspkll knrfvslisl ilqptlfivp fagfqlldiy
       61 wknehrlmct sdictaaerd ryeksvfktq rnvilcttac llywciyqic kyhkeiqsle
      121 evekrykne
//
LOCUS       XP_016691082             422 aa            linear   PLN 06-AUG-2024
DEFINITION  UV-B-induced protein At3g17800, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016691082
VERSION     XP_016691082.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835593.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..422
                     /product="UV-B-induced protein At3g17800, chloroplastic"
                     /calculated_mol_wt=46040
     Region          203..268
                     /region_name="DUF760"
                     /note="Protein of unknown function (DUF760); pfam05542"
                     /db_xref="CDD:461674"
     CDS             1..422
                     /gene="LOC107908433"
                     /coded_by="XM_016835593.2:470..1738"
                     /db_xref="GeneID:107908433"
ORIGIN      
        1 meaatvvgss mslhrtscsa arsallaang plfprfaanp rssfsiklys svsysksrnr
       61 rmglggrrgm vvkassspds aepnaqiasl rmespigqfl sqilishphl vpaaveqqle
      121 qlqtdrdtde kkeepsasgt dlvlyrriae vkanerkral eeilyalvvq kfmdanislv
      181 paitssadps grvdtwpsqe dkleqihsae ahemiqnhva lilgnrlges tsvaqisklr
      241 vgqvyaasvm ygyflrrvdq rfqlertmkv lpsasdddks sieqtvgddt rpsglgdsyq
      301 aasshpevss wsggissggf gsgikpsrlr tyvmsfdget lqryasirsk eavgiiekht
      361 ealfgrpeia itpqgtvdss ndelikisfg glkrlvleav tfgsflwdve sfvdsryhfv
      421 mn
//
LOCUS       XP_016691081             336 aa            linear   PLN 06-AUG-2024
DEFINITION  purple acid phosphatase 8 [Gossypium hirsutum].
ACCESSION   XP_016691081
VERSION     XP_016691081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835592.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..336
                     /product="purple acid phosphatase 8"
                     /calculated_mol_wt=38389
     Region          41..317
                     /region_name="MPP_ACP5"
                     /note="Homo sapiens acid phosphatase 5 and related
                     proteins, metallophosphatase domain; cd07378"
                     /db_xref="CDD:277324"
     Site            order(48,81,84,119,213,222,248,250)
                     /site_type="active"
                     /db_xref="CDD:277324"
     Site            order(48,81,84,119,213,248,250)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277324"
     Site            125
                     /site_type="other"
                     /note="N-glycosylation site [posttranslational
                     modification]"
                     /db_xref="CDD:277324"
     CDS             1..336
                     /gene="LOC107908432"
                     /coded_by="XM_016835592.2:187..1197"
                     /db_xref="GeneID:107908432"
ORIGIN      
        1 mdgsckhclk wmwvacfyfe fmlvsaefqr fqhpvkadgs lsflvigdwg rkgaynqsqv
       61 alqmgkvgek lgidfvistg dnfyekglat pydphfkhsf tniysanslq kqwcsvlgnh
      121 dyrgdvqaql spilrkidsr wlclrsflvn teiaelffid ttpfvdeyfr npkhqkfdwr
      181 gvipsnkylt rvlkelrcal resvgkwkiv ighhpirsig hhgqtkelit lllpileayn
      241 vdmyinghdh clqhlssits plqfftsggg skawkgdfdy ldgggddeik fyydgqgfms
      301 veltptnaki afydvsgnvl hsfnsnqlyy tystem
//
LOCUS       XP_040944561             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR-RED ELONGATED HYPOCOTYL 3 [Gossypium hirsutum].
ACCESSION   XP_040944561
VERSION     XP_040944561.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088627.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..838
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3"
                     /calculated_mol_wt=95857
     Region          1..838
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..838
                     /gene="LOC107908430"
                     /coded_by="XM_041088627.1:281..2797"
                     /db_xref="GeneID:107908430"
ORIGIN      
        1 mdidlrlpsg eqckededan gidnmldgde slhngmvqvv gealraedgg emhssavdmv
       61 tfkedtnlep lsgmefeshg eaysfyqeya rsmgfntaiq nsrrsktsre fidakfacsr
      121 ygtkreydks fnrprarqsk qdpenatgrr scsktdckas mhvkrrpdgk wvihsfvkeh
      181 nhellpaqav seqtrrmyaa marqfaeykn vvglkndpkn pfdkgrnlal eaadvkille
      241 ffthmqsins nffyavdlge dqrlkslfwv dsksrhdysy fcdavsfdtt yvtnkykmpl
      301 alfigvnhhy qciplgcalv sdesaatfsw lmqtwlkamg gqsprvlitd qdrtlksvva
      361 eifpntlhcf flwhvlgkvs enlghvikqh gnlmekfekc iyrswtdeef gkrwwkildr
      421 felkddewmk slyedrkkwv ptyimnvlla gmstvqraes vnsffdkyvh kkttvqdflk
      481 hyeailqdry eeeakansds wskvptlksp spfeksvagv ythtlfkkfq ievvgaiach
      541 pkpenhdstc sifrvqdlek nqdfivtlne mkaevscicr lyeykgylcr hamvvlqing
      601 qstipsqyil krwtkeaksr hfmgeeseqv qsraqryndl fqrgmkliee gslsqesyyi
      661 afrsleeafg nclsantsnk slaeavasps qgmicieedn qsrstsktnk kknptkkrkg
      721 nseqevmava ptdglqqmdk lssrsvalds yfgaqpsvqg mvqlnlmapr dnyygnqqti
      781 qglgqlntia tshdgyygtq qampgmgpmd ffrspsfyir ddpnvrvaql hddasrht
//
LOCUS       XP_040944562             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR-RED ELONGATED HYPOCOTYL 3 [Gossypium hirsutum].
ACCESSION   XP_040944562
VERSION     XP_040944562.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088628.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..838
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3"
                     /calculated_mol_wt=95857
     Region          1..838
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..838
                     /gene="LOC107908430"
                     /coded_by="XM_041088628.1:252..2768"
                     /db_xref="GeneID:107908430"
ORIGIN      
        1 mdidlrlpsg eqckededan gidnmldgde slhngmvqvv gealraedgg emhssavdmv
       61 tfkedtnlep lsgmefeshg eaysfyqeya rsmgfntaiq nsrrsktsre fidakfacsr
      121 ygtkreydks fnrprarqsk qdpenatgrr scsktdckas mhvkrrpdgk wvihsfvkeh
      181 nhellpaqav seqtrrmyaa marqfaeykn vvglkndpkn pfdkgrnlal eaadvkille
      241 ffthmqsins nffyavdlge dqrlkslfwv dsksrhdysy fcdavsfdtt yvtnkykmpl
      301 alfigvnhhy qciplgcalv sdesaatfsw lmqtwlkamg gqsprvlitd qdrtlksvva
      361 eifpntlhcf flwhvlgkvs enlghvikqh gnlmekfekc iyrswtdeef gkrwwkildr
      421 felkddewmk slyedrkkwv ptyimnvlla gmstvqraes vnsffdkyvh kkttvqdflk
      481 hyeailqdry eeeakansds wskvptlksp spfeksvagv ythtlfkkfq ievvgaiach
      541 pkpenhdstc sifrvqdlek nqdfivtlne mkaevscicr lyeykgylcr hamvvlqing
      601 qstipsqyil krwtkeaksr hfmgeeseqv qsraqryndl fqrgmkliee gslsqesyyi
      661 afrsleeafg nclsantsnk slaeavasps qgmicieedn qsrstsktnk kknptkkrkg
      721 nseqevmava ptdglqqmdk lssrsvalds yfgaqpsvqg mvqlnlmapr dnyygnqqti
      781 qglgqlntia tshdgyygtq qampgmgpmd ffrspsfyir ddpnvrvaql hddasrht
//
LOCUS       XP_040944563             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR-RED ELONGATED HYPOCOTYL 3 [Gossypium hirsutum].
ACCESSION   XP_040944563
VERSION     XP_040944563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088629.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..838
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3"
                     /calculated_mol_wt=95857
     Region          1..838
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..838
                     /gene="LOC107908430"
                     /coded_by="XM_041088629.1:654..3170"
                     /db_xref="GeneID:107908430"
ORIGIN      
        1 mdidlrlpsg eqckededan gidnmldgde slhngmvqvv gealraedgg emhssavdmv
       61 tfkedtnlep lsgmefeshg eaysfyqeya rsmgfntaiq nsrrsktsre fidakfacsr
      121 ygtkreydks fnrprarqsk qdpenatgrr scsktdckas mhvkrrpdgk wvihsfvkeh
      181 nhellpaqav seqtrrmyaa marqfaeykn vvglkndpkn pfdkgrnlal eaadvkille
      241 ffthmqsins nffyavdlge dqrlkslfwv dsksrhdysy fcdavsfdtt yvtnkykmpl
      301 alfigvnhhy qciplgcalv sdesaatfsw lmqtwlkamg gqsprvlitd qdrtlksvva
      361 eifpntlhcf flwhvlgkvs enlghvikqh gnlmekfekc iyrswtdeef gkrwwkildr
      421 felkddewmk slyedrkkwv ptyimnvlla gmstvqraes vnsffdkyvh kkttvqdflk
      481 hyeailqdry eeeakansds wskvptlksp spfeksvagv ythtlfkkfq ievvgaiach
      541 pkpenhdstc sifrvqdlek nqdfivtlne mkaevscicr lyeykgylcr hamvvlqing
      601 qstipsqyil krwtkeaksr hfmgeeseqv qsraqryndl fqrgmkliee gslsqesyyi
      661 afrsleeafg nclsantsnk slaeavasps qgmicieedn qsrstsktnk kknptkkrkg
      721 nseqevmava ptdglqqmdk lssrsvalds yfgaqpsvqg mvqlnlmapr dnyygnqqti
      781 qglgqlntia tshdgyygtq qampgmgpmd ffrspsfyir ddpnvrvaql hddasrht
//
LOCUS       XP_040944564             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR-RED ELONGATED HYPOCOTYL 3 [Gossypium hirsutum].
ACCESSION   XP_040944564
VERSION     XP_040944564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088630.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..838
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3"
                     /calculated_mol_wt=95857
     Region          1..838
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..838
                     /gene="LOC107908430"
                     /coded_by="XM_041088630.1:252..2768"
                     /db_xref="GeneID:107908430"
ORIGIN      
        1 mdidlrlpsg eqckededan gidnmldgde slhngmvqvv gealraedgg emhssavdmv
       61 tfkedtnlep lsgmefeshg eaysfyqeya rsmgfntaiq nsrrsktsre fidakfacsr
      121 ygtkreydks fnrprarqsk qdpenatgrr scsktdckas mhvkrrpdgk wvihsfvkeh
      181 nhellpaqav seqtrrmyaa marqfaeykn vvglkndpkn pfdkgrnlal eaadvkille
      241 ffthmqsins nffyavdlge dqrlkslfwv dsksrhdysy fcdavsfdtt yvtnkykmpl
      301 alfigvnhhy qciplgcalv sdesaatfsw lmqtwlkamg gqsprvlitd qdrtlksvva
      361 eifpntlhcf flwhvlgkvs enlghvikqh gnlmekfekc iyrswtdeef gkrwwkildr
      421 felkddewmk slyedrkkwv ptyimnvlla gmstvqraes vnsffdkyvh kkttvqdflk
      481 hyeailqdry eeeakansds wskvptlksp spfeksvagv ythtlfkkfq ievvgaiach
      541 pkpenhdstc sifrvqdlek nqdfivtlne mkaevscicr lyeykgylcr hamvvlqing
      601 qstipsqyil krwtkeaksr hfmgeeseqv qsraqryndl fqrgmkliee gslsqesyyi
      661 afrsleeafg nclsantsnk slaeavasps qgmicieedn qsrstsktnk kknptkkrkg
      721 nseqevmava ptdglqqmdk lssrsvalds yfgaqpsvqg mvqlnlmapr dnyygnqqti
      781 qglgqlntia tshdgyygtq qampgmgpmd ffrspsfyir ddpnvrvaql hddasrht
//
LOCUS       XP_040944565             838 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR-RED ELONGATED HYPOCOTYL 3 [Gossypium hirsutum].
ACCESSION   XP_040944565
VERSION     XP_040944565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088631.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..838
                     /product="protein FAR-RED ELONGATED HYPOCOTYL 3"
                     /calculated_mol_wt=95857
     Region          1..838
                     /region_name="FHY3"
                     /note="Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional;
                     PLN03097"
                     /db_xref="CDD:178645"
     CDS             1..838
                     /gene="LOC107908430"
                     /coded_by="XM_041088631.1:661..3177"
                     /db_xref="GeneID:107908430"
ORIGIN      
        1 mdidlrlpsg eqckededan gidnmldgde slhngmvqvv gealraedgg emhssavdmv
       61 tfkedtnlep lsgmefeshg eaysfyqeya rsmgfntaiq nsrrsktsre fidakfacsr
      121 ygtkreydks fnrprarqsk qdpenatgrr scsktdckas mhvkrrpdgk wvihsfvkeh
      181 nhellpaqav seqtrrmyaa marqfaeykn vvglkndpkn pfdkgrnlal eaadvkille
      241 ffthmqsins nffyavdlge dqrlkslfwv dsksrhdysy fcdavsfdtt yvtnkykmpl
      301 alfigvnhhy qciplgcalv sdesaatfsw lmqtwlkamg gqsprvlitd qdrtlksvva
      361 eifpntlhcf flwhvlgkvs enlghvikqh gnlmekfekc iyrswtdeef gkrwwkildr
      421 felkddewmk slyedrkkwv ptyimnvlla gmstvqraes vnsffdkyvh kkttvqdflk
      481 hyeailqdry eeeakansds wskvptlksp spfeksvagv ythtlfkkfq ievvgaiach
      541 pkpenhdstc sifrvqdlek nqdfivtlne mkaevscicr lyeykgylcr hamvvlqing
      601 qstipsqyil krwtkeaksr hfmgeeseqv qsraqryndl fqrgmkliee gslsqesyyi
      661 afrsleeafg nclsantsnk slaeavasps qgmicieedn qsrstsktnk kknptkkrkg
      721 nseqevmava ptdglqqmdk lssrsvalds yfgaqpsvqg mvqlnlmapr dnyygnqqti
      781 qglgqlntia tshdgyygtq qampgmgpmd ffrspsfyir ddpnvrvaql hddasrht
//
LOCUS       XP_040944566             705 aa            linear   PLN 06-AUG-2024
DEFINITION  ABC transporter G family member 11 [Gossypium hirsutum].
ACCESSION   XP_040944566
VERSION     XP_040944566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088632.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..705
                     /product="ABC transporter G family member 11"
                     /calculated_mol_wt=78390
     Region          68..653
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..705
                     /gene="LOC107908428"
                     /coded_by="XM_041088632.1:315..2432"
                     /db_xref="GeneID:107908428"
ORIGIN      
        1 mrtsssntam meiqankpag tgmvvgglsp lsetlwrekt dtefmgdvsa rltwedltvm
       61 vtlsngatqk vlegltgyae pgtltalmgp sgsgkstlld alssrlaana flsgtillng
      121 rktklsfgta ayvtqddnli gtltvretis ysarlrlpdt mpwsakrdlv egtiiemglq
      181 dcadtvignw hlrgisggek rrvsialeil mrprllflde ptsgldsasa ffvtqtlrgl
      241 srdgrtvias vhqpssevfe lfdqlyllse gktiyfgqas eayeffaqag fpcpalrnps
      301 dhflrcinsd fdkvkatlkg smklrfeasd dplekittte airtlinfyr tshqcyaake
      361 kvdeiskvrg tvldsggsqa sflmqsytlt krsfvnmsrd fgyywlrlli yvvvtvcigt
      421 iylnigtsyn silargacas fvfgfvtfms iggfpsfved mkvfqrerln ghygvtafvi
      481 gntlsampfl imitfisgti cyfmvrlhpg fehymffvlc lyasvtvves lmmaiasivp
      541 nflmgiitga giqgifmlvs gyfrlpndip kpvwrypmsy isfhfwalqg qyqndlkgll
      601 fdnqppelpk ipgeyilenv fqidvgrskw idlsvifsmi iiyriifflm ikisedvtpw
      661 irglvarrrm qqkngtqntm vapslsqsps lrnyvanran grgkr
//
LOCUS       XP_016691077             601 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016691077
VERSION     XP_016691077.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835588.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..601
                     /product="putative 3,4-dihydroxy-2-butanone kinase isoform
                     X1"
                     /calculated_mol_wt=62219
     Region          19..577
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..601
                     /gene="LOC107908427"
                     /coded_by="XM_016835588.2:380..2185"
                     /db_xref="GeneID:107908427"
ORIGIN      
        1 mkadnearlf aeigktnkdv vtefieglve typglqyldg fpevkvvira dasgatydkv
       61 avisgggsgh epahagfvge gmltasicgd vfaspsvdsi lagiravtgp mgcllivmny
      121 tgdrlnfgla aeqarsegyk ietvivgddc alppllgiag rrglagtifv nkiagaaaaa
      181 glsladvaae akrasqmvgt mgvalsvctl pgqvtsdrlg pgkmelglgi hgepgaavad
      241 lqsvdvvvsh vlkqilsset nyvpitrgnr vvlminglga tpvmelmiaa gktvpklqle
      301 fglavervyt gsfmtsldma gfsisimkad qtllqrldap tkaphwpvgs agnrppakip
      361 vplppsrstk seeslsrplq lseqgrilea aieaavnavi vmrdslndwd skvgdgdcgs
      421 tmysgatail ddmkkyypln daaetvneig ssvrrvmggt sgvlynifsk aayarlkans
      481 dstvtakqwa eafeaaidav skyggasagy rtlldalipa lsvlkerlta gddsstafvl
      541 sseaalagae stkdmqaqag rssyvsaail atvpdpgama aaawyraaal avkakyekas
      601 s
//
LOCUS       XP_016691078             598 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016691078
VERSION     XP_016691078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835589.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..598
                     /product="putative 3,4-dihydroxy-2-butanone kinase isoform
                     X2"
                     /calculated_mol_wt=61849
     Region          19..574
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..598
                     /gene="LOC107908427"
                     /coded_by="XM_016835589.2:381..2177"
                     /db_xref="GeneID:107908427"
ORIGIN      
        1 mkadnearlf aeigktnkdv vtefieglve typglqyldg fpevkvvira dasgatydkv
       61 avisgggsgh epahagfvge gmltasicgd vfaspsvdsi lagiravtgp mgcllivmny
      121 tgdrlnfgla aeqarsegyk ietvivgddc alppllgiag rrglagtifv nkiagaaaaa
      181 glsladvaae akrasqmvgt mgvalsvctl pgqvtsdrlg pgkmelglgi hgepgaavad
      241 lqsvdvvvsh vlkqilsset nyvpitrgnr vvlminglga tpvmelmiaa gktvpklqle
      301 fglavervyt gsfmtsldma gfsisimkad qtllqrldap tkaphwpvgs agnrppakip
      361 vplppsrstk seeslsrplq lseqgrilea aieaavnavi vmrdslndwd skvgdgdcgs
      421 tmysgatail ddmkkyypln daaetvneig ssvrrvmggt sgvlynifsk aayarlkans
      481 dstvtakqsf eaaidavsky ggasagyrtl ldalipalsv lkerltagdd sstafvlsse
      541 aalagaestk dmqaqagrss yvsaailatv pdpgamaaaa wyraaalavk akyekass
//
LOCUS       XP_016691079             596 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 3,4-dihydroxy-2-butanone kinase isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016691079
VERSION     XP_016691079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835590.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..596
                     /product="putative 3,4-dihydroxy-2-butanone kinase isoform
                     X3"
                     /calculated_mol_wt=61659
     Region          6..572
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..596
                     /gene="LOC107908427"
                     /coded_by="XM_016835590.2:166..1956"
                     /db_xref="GeneID:107908427"
ORIGIN      
        1 mafqgkklin npddvvtefi eglvetypgl qyldgfpevk vviradasga tydkvavisg
       61 ggsghepaha gfvgegmlta sicgdvfasp svdsilagir avtgpmgcll ivmnytgdrl
      121 nfglaaeqar segykietvi vgddcalppl lgiagrrgla gtifvnkiag aaaaaglsla
      181 dvaaeakras qmvgtmgval svctlpgqvt sdrlgpgkme lglgihgepg aavadlqsvd
      241 vvvshvlkqi lssetnyvpi trgnrvvlmi nglgatpvme lmiaagktvp klqlefglav
      301 ervytgsfmt sldmagfsis imkadqtllq rldaptkaph wpvgsagnrp pakipvplpp
      361 srstkseesl srplqlseqg rileaaieaa vnavivmrds lndwdskvgd gdcgstmysg
      421 atailddmkk yyplndaaet vneigssvrr vmggtsgvly nifskaayar lkansdstvt
      481 akqwaeafea aidavskygg asagyrtlld alipalsvlk erltagddss tafvlsseaa
      541 lagaestkdm qaqagrssyv saailatvpd pgamaaaawy raaalavkak yekass
//
LOCUS       XP_040944567             593 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 3,4-dihydroxy-2-butanone kinase isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040944567
VERSION     XP_040944567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088633.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..593
                     /product="putative 3,4-dihydroxy-2-butanone kinase isoform
                     X4"
                     /calculated_mol_wt=61288
     Region          6..569
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..593
                     /gene="LOC107908427"
                     /coded_by="XM_041088633.1:166..1947"
                     /db_xref="GeneID:107908427"
ORIGIN      
        1 mafqgkklin npddvvtefi eglvetypgl qyldgfpevk vviradasga tydkvavisg
       61 ggsghepaha gfvgegmlta sicgdvfasp svdsilagir avtgpmgcll ivmnytgdrl
      121 nfglaaeqar segykietvi vgddcalppl lgiagrrgla gtifvnkiag aaaaaglsla
      181 dvaaeakras qmvgtmgval svctlpgqvt sdrlgpgkme lglgihgepg aavadlqsvd
      241 vvvshvlkqi lssetnyvpi trgnrvvlmi nglgatpvme lmiaagktvp klqlefglav
      301 ervytgsfmt sldmagfsis imkadqtllq rldaptkaph wpvgsagnrp pakipvplpp
      361 srstkseesl srplqlseqg rileaaieaa vnavivmrds lndwdskvgd gdcgstmysg
      421 atailddmkk yyplndaaet vneigssvrr vmggtsgvly nifskaayar lkansdstvt
      481 akqsfeaaid avskyggasa gyrtlldali palsvlkerl tagddsstaf vlsseaalag
      541 aestkdmqaq agrssyvsaa ilatvpdpga maaaawyraa alavkakyek ass
//
LOCUS       XP_016691073             821 aa            linear   PLN 06-AUG-2024
DEFINITION  potassium channel SKOR isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016691073
VERSION     XP_016691073.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835584.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691073.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..821
                     /product="potassium channel SKOR isoform X1"
                     /calculated_mol_wt=94228
     Region          53..820
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          544..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(545..546,549..551,553..554,558,561,570,572,574,
                     578..579,582..584,586..587,591,594,603,605,607,611..612,
                     615..617,619..620,624,627,636)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          572..603
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          605..636
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          669..694
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..821
                     /gene="LOC107908423"
                     /coded_by="XM_016835584.2:72..2537"
                     /db_xref="GeneID:107908423"
ORIGIN      
        1 malncsesqe tyaiidfvpq mirleeerve rrrrplwkrv fsmlktelel seggsrsrsh
       61 angfiihphn wwyvawthfi liwaiyssff tplefgffrg lpenlflldi agqlaflfdi
      121 vvhfflayrh thshhlvydr rlitlrylks rfivdflgcl pwdaiykvcg rkepirymlw
      181 irlsralrvt effeklekdi rinylfiriv klivveyyct haagcifyyl attvppskeg
      241 ytwigslqmg eyrysnfrei dlwkryilsl yfsvvtmvtv gygdihavnv remifvmiyv
      301 sfdmilgayl lgnmaalivk gskterfrdk madlikymnr nnldkqiske ikghlrlqyd
      361 csyteasalq dipasirtki sqklyepfik evflfkgcst gfikqiaikv heefflpgev
      421 iieqgnvvdq lyivchgklv evgrgkndet gnplmdlqty ssfgevsflc ntpqpytiqv
      481 relckvlrid krsfmeiiei yfsdgriiln nllegkdanm kneilesdvt lyigklesel
      541 aarlncaayn gdlhrlkrli gagadpnktd ydgrsplhia asrgyeditg flieqkvdln
      601 isdkfgntpl leaikhghdp vthllvqaga llamddaasf lcmtvarrdl dllkralagg
      661 idpnaksydy rtplhvaase glyfvaktli eagasvlsid rwgntpvdda riggnrnlia
      721 lleaarasqm adffdhpqqi rgekwkkkct vfpyhpwhek eekrqgvvlw vpqsmnelvk
      781 eakeqlqcge gyccilsqdg akvldtsmis ndqklflvng s
//
LOCUS       XP_040944568             794 aa            linear   PLN 06-AUG-2024
DEFINITION  potassium channel SKOR isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944568
VERSION     XP_040944568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088634.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..794
                     /product="potassium channel SKOR isoform X2"
                     /calculated_mol_wt=91081
     Region          53..793
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          517..543
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(518..519,522..524,526..527,531,534,543,545,547,
                     551..552,555..557,559..560,564,567,576,578,580,584..585,
                     588..590,592..593,597,600,609)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          545..576
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          578..609
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          642..667
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..794
                     /gene="LOC107908423"
                     /coded_by="XM_041088634.1:72..2456"
                     /db_xref="GeneID:107908423"
ORIGIN      
        1 malncsesqe tyaiidfvpq mirleeerve rrrrplwkrv fsmlktelel seggsrsrsh
       61 angfiihphn wwyvawthfi liwaiyssff tplefgffrg lpenlflldi agqlaflfdi
      121 vvhfflayrh thshhlvydr rlitlrylks rfivdflgcl pwdaiykvcg rkepirymlw
      181 irlsralrvt effeklekdi rinylfiriv klivveyyct haagcifyyl attvppskeg
      241 ytwigslqmg eyrysnfrei dlwkryilsl yfsvvtmvtv gygdihavnv remifvmiyv
      301 sfdmilgayl lgnmaalivk gskterfrdk madlikymnr nnldkqiske ikghlrlqyd
      361 csyteasalq dipasirtka ikvheefflp geviieqgnv vdqlyivchg klvevgrgkn
      421 detgnplmdl qtyssfgevs flcntpqpyt iqvrelckvl ridkrsfmei ieiyfsdgri
      481 ilnnllegkd anmkneiles dvtlyigkle selaarlnca ayngdlhrlk rligagadpn
      541 ktdydgrspl hiaasrgyed itgflieqkv dlnisdkfgn tplleaikhg hdpvthllvq
      601 agallamdda asflcmtvar rdldllkral aggidpnaks ydyrtplhva aseglyfvak
      661 tlieagasvl sidrwgntpv ddariggnrn lialleaara sqmadffdhp qqirgekwkk
      721 kctvfpyhpw hekeekrqgv vlwvpqsmne lvkeakeqlq cgegyccils qdgakvldts
      781 misndqklfl vngs
//
LOCUS       XP_016691074             483 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691074
VERSION     XP_016691074.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835585.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691074.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..483
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=53334
     Region          27..67
                     /region_name="OCRE"
                     /note="OCRE domain; cd16074"
                     /db_xref="CDD:293880"
     Region          27..33
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293880"
     Region          34..41
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293880"
     Region          42..49
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293880"
     Region          50..56
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293880"
     Region          58..65
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293880"
     Region          438..477
                     /region_name="G_patch"
                     /note="glycine rich nucleic binding domain; smart00443"
                     /db_xref="CDD:197727"
     CDS             1..483
                     /gene="LOC107908424"
                     /coded_by="XM_016835585.2:305..1756"
                     /db_xref="GeneID:107908424"
ORIGIN      
        1 mkrkdkesdk tmavsteldl qsssdcsfvw dpqthlyfha ssgfyhdpda gwyyssrdgl
       61 yytfengnyv lldmegsvad nsvldepcat asyngpeynr sssqgnevda qnttinvade
      121 ststgpiedt saqaseqppp psewledtli dlylsgynla ansaadasis letdekenfk
      181 fptdgndemy eleegewipe esfglggsse vvpyegdtwd eenwraqygq vtrckdepll
      241 efpvvdlwdw smvtkpkedg kkqvarligr lvkrsakvhp svplgggllk tapicevhld
      301 lvrvrtgqvy klrtpcpryl aslstydssd ptkdwgfpdl lvnkksfvqf ksrqkqksea
      361 trekglkdls mlsdqlstsl kgshayrdra aerralrggf glgpgqknag sdhdndptci
      421 kdakaealnm sfgagsyarr imegmgwkeg ealgsttqgl teplqptgni gnaglgwpqt
      481 rhr
//
LOCUS       XP_016691075             482 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691075
VERSION     XP_016691075.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835586.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691075.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..482
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=53247
     Region          27..66
                     /region_name="OCRE"
                     /note="OCRE domain; cd16074"
                     /db_xref="CDD:293880"
     Region          27..33
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293880"
     Region          34..40
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293880"
     Region          41..48
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293880"
     Region          49..55
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293880"
     Region          57..64
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293880"
     Region          437..476
                     /region_name="G_patch"
                     /note="glycine rich nucleic binding domain; smart00443"
                     /db_xref="CDD:197727"
     CDS             1..482
                     /gene="LOC107908424"
                     /coded_by="XM_016835586.2:295..1743"
                     /db_xref="GeneID:107908424"
ORIGIN      
        1 mkrkdkesdk tmavsteldl qsssdcsfvw dpqthlyfha sgfyhdpdag wyyssrdgly
       61 ytfengnyvl ldmegsvadn svldepcata syngpeynrs ssqgnevdaq nttinvades
      121 tstgpiedts aqaseqpppp sewledtlid lylsgynlaa nsaadasisl etdekenfkf
      181 ptdgndemye leegewipee sfglggssev vpyegdtwde enwraqygqv trckdeplle
      241 fpvvdlwdws mvtkpkedgk kqvarligrl vkrsakvhps vplgggllkt apicevhldl
      301 vrvrtgqvyk lrtpcpryla slstydssdp tkdwgfpdll vnkksfvqfk srqkqkseat
      361 rekglkdlsm lsdqlstslk gshayrdraa erralrggfg lgpgqknags dhdndptcik
      421 dakaealnms fgagsyarri megmgwkege algsttqglt eplqptgnig naglgwpqtr
      481 hr
//
LOCUS       XP_016691076             410 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691076
VERSION     XP_016691076.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835587.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691076.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..410
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=44834
     Region          365..404
                     /region_name="G_patch"
                     /note="glycine rich nucleic binding domain; smart00443"
                     /db_xref="CDD:197727"
     CDS             1..410
                     /gene="LOC107908424"
                     /coded_by="XM_016835587.2:473..1705"
                     /db_xref="GeneID:107908424"
ORIGIN      
        1 megsvadnsv ldepcatasy ngpeynrsss qgnevdaqnt tinvadests tgpiedtsaq
       61 aseqppppse wledtlidly lsgynlaans aadasislet dekenfkfpt dgndemyele
      121 egewipeesf glggssevvp yegdtwdeen wraqygqvtr ckdepllefp vvdlwdwsmv
      181 tkpkedgkkq varligrlvk rsakvhpsvp lgggllktap icevhldlvr vrtgqvyklr
      241 tpcprylasl stydssdptk dwgfpdllvn kksfvqfksr qkqkseatre kglkdlsmls
      301 dqlstslkgs hayrdraaer ralrggfglg pgqknagsdh dndptcikda kaealnmsfg
      361 agsyarrime gmgwkegeal gsttqgltep lqptgnigna glgwpqtrhr
//
LOCUS       XP_016693415             206 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 4 [Gossypium hirsutum].
ACCESSION   XP_016693415
VERSION     XP_016693415.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837926.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="nudix hydrolase 4"
                     /calculated_mol_wt=23425
     Region          59..191
                     /region_name="NUDIX_DIPP2_like_Nudt4"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; cd04666"
                     /db_xref="CDD:467551"
     CDS             1..206
                     /gene="LOC107910154"
                     /coded_by="XM_016837926.2:218..838"
                     /db_xref="GeneID:107910154"
ORIGIN      
        1 mggisgflmk fpslihflls llekiparlp mpieklvsrv syprtgrhlq rynnrgfrlv
       61 vgcipyryre sedgksieea ievlvinaqn gkgilfpkgg wekdesmeea airetveeag
      121 vvgviecklg kwcykskrqs iyheghmfgl lvkqeldgwp eknirkrewv tvskareecp
      181 hlwmiealee lvwrqtqaga aqggsk
//
LOCUS       XP_016693416             121 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ANTI-SILENCING 1 [Gossypium hirsutum].
ACCESSION   XP_016693416
VERSION     XP_016693416.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837927.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="protein ANTI-SILENCING 1"
                     /calculated_mol_wt=14043
     Region          2..>49
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..121
                     /gene="LOC107910156"
                     /coded_by="XM_016837927.2:384..749"
                     /db_xref="GeneID:107910156"
ORIGIN      
        1 mqnsrlhfig twrnrycnrf pslsngftks hsnvsastqk tpiihidmdr skwfgelpwe
       61 eslrdahefg klvlfqnldp ayssaevedi vwnafnetcr akmvqqtaly fllpcnvysh
      121 r
//
LOCUS       XP_016693417             121 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ANTI-SILENCING 1 [Gossypium hirsutum].
ACCESSION   XP_016693417
VERSION     XP_016693417.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837928.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="protein ANTI-SILENCING 1"
                     /calculated_mol_wt=14043
     Region          2..>49
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     CDS             1..121
                     /gene="LOC107910156"
                     /coded_by="XM_016837928.2:414..779"
                     /db_xref="GeneID:107910156"
ORIGIN      
        1 mqnsrlhfig twrnrycnrf pslsngftks hsnvsastqk tpiihidmdr skwfgelpwe
       61 eslrdahefg klvlfqnldp ayssaevedi vwnafnetcr akmvqqtaly fllpcnvysh
      121 r
//
LOCUS       XP_016666844             535 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016666844
VERSION     XP_016666844.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811355.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666844.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="chaperone protein DnaJ isoform X1"
                     /calculated_mol_wt=58636
     Region          70..428
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..535
                     /gene="LOC107887190"
                     /coded_by="XM_016811355.2:159..1766"
                     /db_xref="GeneID:107887190"
ORIGIN      
        1 matsyplync gtrqnsflip gsgsrtsvlg lrwsesqffc kthapsyrlg iikrkcrhna
       61 viraaasgsd yystlnvsrg atlqeiktsy rslarkyhpd inktpgaeek fkeisaayev
      121 lsdnekrsly drfgeaglqg eydgsgdysa avdpfevyna ffggsdgffs gmgepggfnf
      181 nlrnngsndl diwyelhlnf eesifggere imvsyletcn dcggtgakts scvksctdcg
      241 gkggstkskr tpfgvaievs tcsscggkgk iitdkcrrcs gcckvkvkrs mriiippgva
      301 dgftkrirge gnvdkkrgfa gdlfvvlrig vkqgiwrdgl nlyskinvdy teailgtvvk
      361 vetvegikdl ripcgiqpgd avklsrlgvp dvnkpsvrgd hhfivnvlip kdisnkerkl
      421 ieevaslkvs krscpsdgmh eageskeras ikrtsrvasl wnsvktflgr resregfasi
      481 tadassalll rshcksdssl ltvsyfsvfv ftliwtlmrr nkncciglnq rkhts
//
LOCUS       XP_040944569             526 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944569
VERSION     XP_040944569.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088635.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="chaperone protein DnaJ isoform X2"
                     /calculated_mol_wt=58029
     Region          70..419
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..526
                     /gene="LOC107887190"
                     /coded_by="XM_041088635.1:152..1732"
                     /db_xref="GeneID:107887190"
ORIGIN      
        1 matsyplync gtrqnsflip gsgsrtsvlg lrwsesqffc kthapsyrlg iikrkcrhna
       61 viraaasgsd yystlnvsrg atlqeiktsy rslarkyhpd inktpgaeek fkeisaayei
      121 mrkdlymias vrqvykenmm dqvdpfevyn affggsdgff sgmgepggfn fnlrnngsnd
      181 ldiwyelhln feesifgger eimvsyletc ndcggtgakt sscvksctdc ggkggstksk
      241 rtpfgvaiev stcsscggkg kiitdkcrrc sgcckvkvkr smriiippgv adgftkrirg
      301 egnvdkkrgf agdlfvvlri gvkqgiwrdg lnlyskinvd yteailgtvv kvetvegikd
      361 lripcgiqpg davklsrlgv pdvnkpsvrg dhhfivnvli pkdisnkerk lieevaslkv
      421 skrscpsdgm heageskera sikrtsrvas lwnsvktflg rresregfas itadassall
      481 lrshcksdss lltvsyfsvf vftliwtlmr rnknccigln qrkhts
//
LOCUS       XP_040944570             512 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944570
VERSION     XP_040944570.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088636.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..512
                     /product="chaperone protein DnaJ isoform X3"
                     /calculated_mol_wt=56323
     Region          70..405
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..512
                     /gene="LOC107887190"
                     /coded_by="XM_041088636.1:152..1690"
                     /db_xref="GeneID:107887190"
ORIGIN      
        1 matsyplync gtrqnsflip gsgsrtsvlg lrwsesqffc kthapsyrlg iikrkcrhna
       61 viraaasgsd yystlnvsrg atlqeiktsy rslarkyhpd inktpgaeek fkeisaayev
      121 ykenmmdqvd pfevynaffg gsdgffsgmg epggfnfnlr nngsndldiw yelhlnfees
      181 ifggereimv syletcndcg gtgaktsscv ksctdcggkg gstkskrtpf gvaievstcs
      241 scggkgkiit dkcrrcsgcc kvkvkrsmri iippgvadgf tkrirgegnv dkkrgfagdl
      301 fvvlrigvkq giwrdglnly skinvdytea ilgtvvkvet vegikdlrip cgiqpgdavk
      361 lsrlgvpdvn kpsvrgdhhf ivnvlipkdi snkerkliee vaslkvskrs cpsdgmheag
      421 eskerasikr tsrvaslwns vktflgrres regfasitad assalllrsh cksdsslltv
      481 syfsvfvftl iwtlmrrnkn cciglnqrkh ts
//
LOCUS       XP_040944571             491 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944571
VERSION     XP_040944571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088637.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="chaperone protein DnaJ isoform X4"
                     /calculated_mol_wt=53689
     Region          70..428
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..491
                     /gene="LOC107887190"
                     /coded_by="XM_041088637.1:152..1627"
                     /db_xref="GeneID:107887190"
ORIGIN      
        1 matsyplync gtrqnsflip gsgsrtsvlg lrwsesqffc kthapsyrlg iikrkcrhna
       61 viraaasgsd yystlnvsrg atlqeiktsy rslarkyhpd inktpgaeek fkeisaayev
      121 lsdnekrsly drfgeaglqg eydgsgdysa avdpfevyna ffggsdgffs gmgepggfnf
      181 nlrnngsndl diwyelhlnf eesifggere imvsyletcn dcggtgakts scvksctdcg
      241 gkggstkskr tpfgvaievs tcsscggkgk iitdkcrrcs gcckvkvkrs mriiippgva
      301 dgftkrirge gnvdkkrgfa gdlfvvlrig vkqgiwrdgl nlyskinvdy teailgtvvk
      361 vetvegikdl ripcgiqpgd avklsrlgvp dvnkpsvrgd hhfivnvlip kdisnkerkl
      421 ieevaslkvs krscpsdgmh eageskeras ikrtsrvasl wnsakrvprr vcvnygrrii
      481 svtvavtlqv r
//
LOCUS       XP_040944572             425 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040944572
VERSION     XP_040944572.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088638.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..425
                     /product="chaperone protein DnaJ isoform X5"
                     /calculated_mol_wt=46306
     Region          70..415
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..425
                     /gene="LOC107887190"
                     /coded_by="XM_041088638.1:152..1429"
                     /db_xref="GeneID:107887190"
ORIGIN      
        1 matsyplync gtrqnsflip gsgsrtsvlg lrwsesqffc kthapsyrlg iikrkcrhna
       61 viraaasgsd yystlnvsrg atlqeiktsy rslarkyhpd inktpgaeek fkeisaayev
      121 lsdnekrsly drfgeaglqg eydgsgdysa avdpfevyna ffggsdgffs gmgepggfnf
      181 nlrnngsndl diwyelhlnf eesifggere imvsyletcn dcggtgakts scvksctdcg
      241 gkggstkskr tpfgvaievs tcsscggkgk iitdkcrrcs gcckvkvkrs mriiippgva
      301 dgftkrirge gnvdkkrgfa gdlfvvlrig vkqgiwrdgl nlyskinvdy teailgtvvk
      361 vetvegikdl ripcgiqpgd avklsrlgvp dvnkpsvrgd hhfivnvlip kdissipift
      421 rvarh
//
LOCUS       XP_040944573             412 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944573
VERSION     XP_040944573.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088639.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..412
                     /product="chaperone protein DnaJ isoform X6"
                     /calculated_mol_wt=45381
     Region          <36..305
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..412
                     /gene="LOC107887190"
                     /coded_by="XM_041088639.1:67..1305"
                     /db_xref="GeneID:107887190"
ORIGIN      
        1 mrsyqimrkd lymiasvrqv ykenmmdqvd pfevynaffg gsdgffsgmg epggfnfnlr
       61 nngsndldiw yelhlnfees ifggereimv syletcndcg gtgaktsscv ksctdcggkg
      121 gstkskrtpf gvaievstcs scggkgkiit dkcrrcsgcc kvkvkrsmri iippgvadgf
      181 tkrirgegnv dkkrgfagdl fvvlrigvkq giwrdglnly skinvdytea ilgtvvkvet
      241 vegikdlrip cgiqpgdavk lsrlgvpdvn kpsvrgdhhf ivnvlipkdi snkerkliee
      301 vaslkvskrs cpsdgmheag eskerasikr tsrvaslwns vktflgrres regfasitad
      361 assalllrsh cksdsslltv syfsvfvftl iwtlmrrnkn cciglnqrkh ts
//
LOCUS       XP_016693419             655 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At1g48480 [Gossypium hirsutum].
ACCESSION   XP_016693419
VERSION     XP_016693419.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837930.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..655
                     /product="probable inactive receptor kinase At1g48480"
                     /calculated_mol_wt=70468
     Region          25..59
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <74..>202
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          89..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          378..641
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(378..381,384,386,398,400,428,444..447,497,501..502,
                     504,514..515)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..655
                     /gene="LOC107910157"
                     /coded_by="XM_016837930.2:327..2294"
                     /db_xref="GeneID:107910157"
ORIGIN      
        1 mftqfffiai lsslllqvak pdlvtdraal lslrssvggr tllwnvsnqs pcswagvtce
       61 rnrvtvlrlp gvalsgqipt gifgnltqlr tlslrlnslt gplpsdlalc qnlrnlylqg
      121 nhfsgeipef lfglhdlvrl slsgnnfsge vsvgfnnltr lrtllldsns lsgsvpelgs
      181 lqnldqfnvs nnllngsipk glqkygfdaf lgnllcgkpl dkacpatata apgntsepan
      241 ptnenkpekk kksklsggai agivigsvlg fllivvilmi lcrkksskks rsiditslkn
      301 qemeipgeks ggemenggya ngngngysva aaavaamvgg gakaaensgt gakklvffgn
      361 atrvfdledl lrasaevlgk gtfgtaykav leggnavavk rlkdvtiser efkdkiegvg
      421 amdhqhlvpl rayyfsrdek llvydympmg slsallhgnk gagrtplnwd irsgialgaa
      481 cgieflhsqg pnvshgniks snilltksye arvsdfglan ivgsssspnr vlgyrapevt
      541 dprkvsqkad vysfgvllle lltgkapths ilneegidlp rwvqsvvree wtsevfdlel
      601 lryqnveeem vqllqlavdc aaqypdkrpt msqvrsriee lrqsslrddl ipqpa
//
LOCUS       XP_040944574             409 aa            linear   PLN 06-AUG-2024
DEFINITION  WD repeat-containing protein RUP2 [Gossypium hirsutum].
ACCESSION   XP_040944574
VERSION     XP_040944574.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088640.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..409
                     /product="WD repeat-containing protein RUP2"
                     /calculated_mol_wt=44467
     Region          <77..403
                     /region_name="PLN00181"
                     /note="protein SPA1-RELATED; Provisional"
                     /db_xref="CDD:177776"
     Region          82..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..187
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          190..232
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          283..318
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          326..369
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..403
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..409
                     /gene="LOC121214677"
                     /coded_by="XM_041088640.1:35..1264"
                     /db_xref="GeneID:121214677"
ORIGIN      
        1 mgaidwsksp kpsnttisfs fewamknlss gihptlptkq tlkhqgdrle ipsaaarcew
       61 dfslstvvss sanaavsdal gsiefdpsnt vvatggiark iriyslnsll pedniqlltr
      121 geqndtafld hvnacsfyic tpaklsslrw rpgsggrllg sgdydgvvme ydlerklpvf
      181 erdehggrrv wsvdyshwdp fvgasgsddg tmqmwdprcg geggecvakv qpaaarssvc
      241 cvefspfgds lialgcadrm ayaydvrkmv eplhvleght ktvtyvrfvd aqtmvsagtd
      301 gclklwnmsd cglirtckgh lnsrsfvgls vwrhggllgc gsennqvfvy dkrwdepica
      361 rglepmarpg fghafvssvc wrqvqedhct llaggsdgvl qvfvgtkis
//
LOCUS       XP_016694118             328 aa            linear   PLN 06-AUG-2024
DEFINITION  prostaglandin E synthase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694118
VERSION     XP_016694118.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838629.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..328
                     /product="prostaglandin E synthase 2 isoform X1"
                     /calculated_mol_wt=36715
     Region          97..168
                     /region_name="GST_N_mPGES2"
                     /note="GST_N family; microsomal Prostaglandin E synthase
                     Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored
                     dimeric protein containing a CXXC motif which catalyzes
                     the isomerization of PGH2 to PGE2. Unlike cytosolic PGE
                     synthase (cPGES) and microsomal...; cd03040"
                     /db_xref="CDD:239338"
     Site            order(103,105..109)
                     /site_type="active"
                     /note="GRX-like active site [active]"
                     /db_xref="CDD:239338"
     Site            order(104..106,110..111,113..114,118,129..131,135,158,162)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239338"
     Site            order(143,155..156,158..159,162)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239338"
     Region          181..322
                     /region_name="GST_C_mPGES2"
                     /note="C-terminal, alpha helical domain of microsomal
                     Prostaglandin E synthase Type 2; cd03197"
                     /db_xref="CDD:198306"
     Site            order(181,188,193,248,250)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198306"
     Site            order(187,191,215..216,219,280,289,292..293)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198306"
     Site            order(198..199,202..203,212,215..216,293,297)
                     /site_type="active"
                     /note="GRX-like active site [active]"
                     /db_xref="CDD:198306"
     CDS             1..328
                     /gene="LOC107910679"
                     /coded_by="XM_016838629.2:120..1106"
                     /db_xref="GeneID:107910679"
ORIGIN      
        1 mrrasftssi lsrtlstvhd ggtvnlhprl lrvalfsssr tdnsnsrrhw fspllnsfsk
       61 ssgqavslgl vgvvasvata asvyakeppp aeiipkdvvl yqyeacpfcn kvkafldyyd
      121 ipykvvevnp iskkeikwsd ykkvpilmvd gqqlvdssai idqlsekilp gkaiisvade
      181 deetkwrrwv dnhlvhvlsp niyrntseal esfdyitsng nfsftekitv kyagaaamyf
      241 vsknlkkkyn itderaalye atetwvdaln grnflggskp nladlavfgv lrpirylrsg
      301 rdmvehtrig ewysrmekvv gessrika
//
LOCUS       XP_040944575             282 aa            linear   PLN 06-AUG-2024
DEFINITION  prostaglandin E synthase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944575
VERSION     XP_040944575.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088641.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..282
                     /product="prostaglandin E synthase 2 isoform X2"
                     /calculated_mol_wt=31559
     Region          97..168
                     /region_name="GST_N_mPGES2"
                     /note="GST_N family; microsomal Prostaglandin E synthase
                     Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored
                     dimeric protein containing a CXXC motif which catalyzes
                     the isomerization of PGH2 to PGE2. Unlike cytosolic PGE
                     synthase (cPGES) and microsomal...; cd03040"
                     /db_xref="CDD:239338"
     Site            order(103,105..109)
                     /site_type="active"
                     /note="GRX-like active site [active]"
                     /db_xref="CDD:239338"
     Site            order(104..106,110..111,113..114,118,129..131,135,158,162)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239338"
     Site            order(143,155..156,158..159,162)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239338"
     Region          181..>276
                     /region_name="GST_C_mPGES2"
                     /note="C-terminal, alpha helical domain of microsomal
                     Prostaglandin E synthase Type 2; cd03197"
                     /db_xref="CDD:198306"
     Site            order(181,188,193,248,250)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198306"
     CDS             1..282
                     /gene="LOC107910679"
                     /coded_by="XM_041088641.1:105..953"
                     /db_xref="GeneID:107910679"
ORIGIN      
        1 mrrasftssi lsrtlstvhd ggtvnlhprl lrvalfsssr tdnsnsrrhw fspllnsfsk
       61 ssgqavslgl vgvvasvata asvyakeppp aeiipkdvvl yqyeacpfcn kvkafldyyd
      121 ipykvvevnp iskkeikwsd ykkvpilmvd gqqlvdssai idqlsekilp gkaiisvade
      181 deetkwrrwv dnhlvhvlsp niyrntseal esfdyitsng nfsftekitv kyagaaamyf
      241 vsknlkkkyn itderaalye atetwvdaln grnflgmisk wi
//
LOCUS       XP_016691158             336 aa            linear   PLN 06-AUG-2024
DEFINITION  galactose mutarotase [Gossypium hirsutum].
ACCESSION   XP_016691158
VERSION     XP_016691158.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835669.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691158.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..336
                     /product="galactose mutarotase"
                     /calculated_mol_wt=36468
     Region          5..335
                     /region_name="PLN00194"
                     /note="aldose 1-epimerase; Provisional"
                     /db_xref="CDD:215098"
     Site            order(58,69,94,169,171,235,276,301)
                     /site_type="active"
                     /db_xref="CDD:185696"
     Site            order(169,301)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:185696"
     CDS             1..336
                     /gene="LOC107908492"
                     /coded_by="XM_016835669.2:125..1135"
                     /db_xref="GeneID:107908492"
ORIGIN      
        1 madqpqiyel nngtvvvkit nygctitsls vpdkngklad vvlgfdtvep yvkgaspyfg
       61 civgrvanri kngkftlngt gyslpinkpp nslhggfkgf dkriwevaey kkgdkpsitf
      121 kyrssdgeeg ypgdvsvtat ytltssmtmk ldmeavpenk atpinlaqht ywnlaghnsg
      181 nildhtiqiw asemtpvden tvptgeikpv kgtpfdftae kkvglqvhev glgydhnyvl
      241 gggeeklglk raaklkdpss srvlnlwtna pgmqfytgny vngvvgkgga vynkhaglcl
      301 etqgfpnain qsnfpsvvvq pgskyqhtml fefsve
//
LOCUS       XP_016691157             391 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691157
VERSION     XP_016691157.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835668.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44566
     Region          153..313
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..391
                     /gene="LOC107908491"
                     /coded_by="XM_016835668.2:332..1507"
                     /db_xref="GeneID:107908491"
ORIGIN      
        1 messddekdg iygnfvpkel ghnfalngtk fvdevlngqs erclenfrmd kpvfyklcdi
       61 lqgkgllrht nrikieeqla iflfiighnl rtravqelfr ysgetisrhf nnvlnaimai
      121 sleffqppgs dvppeitqdp rfypyfkdcv gavdgihvpv mvgvdeqgpf rnkngllsqn
      181 vlaacsfdlk fhyvlagweg sasdlrvlns altrrnklqv pegryylvdn kyanmpgfia
      241 pylgvpynsn efpsgyhhqd akelfnqrhf llrnatdrif galkerfpil msappyplqt
      301 qvklvvaaca lhnyirrekp ddmlfkkyep qtalqiqesl alqeveqaik pvdthdleva
      361 feaeqpelss qlrdsiatem wedyirdlav v
//
LOCUS       XP_040944576             391 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944576
VERSION     XP_040944576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088642.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44566
     Region          153..313
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..391
                     /gene="LOC107908491"
                     /coded_by="XM_041088642.1:1299..2474"
                     /db_xref="GeneID:107908491"
ORIGIN      
        1 messddekdg iygnfvpkel ghnfalngtk fvdevlngqs erclenfrmd kpvfyklcdi
       61 lqgkgllrht nrikieeqla iflfiighnl rtravqelfr ysgetisrhf nnvlnaimai
      121 sleffqppgs dvppeitqdp rfypyfkdcv gavdgihvpv mvgvdeqgpf rnkngllsqn
      181 vlaacsfdlk fhyvlagweg sasdlrvlns altrrnklqv pegryylvdn kyanmpgfia
      241 pylgvpynsn efpsgyhhqd akelfnqrhf llrnatdrif galkerfpil msappyplqt
      301 qvklvvaaca lhnyirrekp ddmlfkkyep qtalqiqesl alqeveqaik pvdthdleva
      361 feaeqpelss qlrdsiatem wedyirdlav v
//
LOCUS       XP_016691154            1374 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691154
VERSION     XP_016691154.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835665.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691154.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1374
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=147493
     Region          1..1374
                     /region_name="PLN02858"
                     /note="fructose-bisphosphate aldolase"
                     /db_xref="CDD:215463"
     CDS             1..1374
                     /gene="LOC107908489"
                     /coded_by="XM_016835665.2:170..4294"
                     /db_xref="GeneID:107908489"
ORIGIN      
        1 magvigfvgl dqlsldmaas llragykvqa fevqnllmne flklggtecf slreagkgva
       61 alivlishvd qindiifghd salkglqkdt viilhstils shiqnleknl redglttsvv
      121 dayvfkatse llngkimvis sgrsdaiska ypflsamsek lytfegetga gsktklvtel
      181 legihliaav eaislgvkag ihpwiiydii snaagnswvf knyipqllsg nvkynflnpf
      241 nhklgivldi aklltfplpl lasahqqlal gsllghgddn tplgqvwdqv fgvhtvdaan
      301 aerynpeela tqitakskav nrvgfiglga mgfgmatylv ksnfcvvgyd vykptltrfe
      361 saggligssp edvskgvdvl vvmvtneaqa esvlfgdlga vsalpsgasi ilsstvspay
      421 viqlerrlkn egkdlklvda pvsggvkras mgeltimaag sddalksagl ilsalsekly
      481 vikggcgags gvkmvnqlla gvhiaasaea mafgarlgls trmlfdiisn sgatswmfen
      541 rvphmldndy tpysaldifv kdlgivarec sahkiplhis tiahqlfiag saagwgrqdd
      601 agvvkvyetl tgvkvegklp alkkevvlqs lppewpvdpi ndihklnqkn srtlvvlddd
      661 ptgtqtvhdv evltewsiks lveqfrkkpi cfyiltnsra lssekatvli kdicnnlcsa
      721 aksvqhidyt vvlrgdstlr ghfpeepdaa vsllgqvdaw ilcpfflqgg rytiddihyv
      781 adsdrlvpag dtefandaaf gykssnlrew veektagrip assvasisiq llrkggpdav
      841 cellcslekq gstcivnavs erdmavfaag miqaelkgks flcrsaasfv sarigiipka
      901 pirpkdlgis kersgglivv gsyvpkttkq veelhsqhgh mlkslevsvh kvamksseer
      961 eeeinrtaem asvflaarkd tlimssreli tgktasesle infkvssalv evvrrittrp
     1021 ryilakggit ssdlatkale akrakvvgqa lagiplwelg hesrhpgvpy ivfpgnvgds
     1081 kalvevvrsw ahplrlsstk kilinaekgg yavgafnvyn megvkavvsa aeqerspail
     1141 qvhpgafkqg gvtlvaccis aaeeasvpit vhfdhgtskq elleslelgf dsvmvdgshl
     1201 pfkdnisytk hisnlahlrd mlveaelgkl sgteddltve dyeakltdin qaeefivetg
     1261 idalavcign vhgkypasgp nlkldllkdl yalsskkgvf lvlhgasgls kelvkgcier
     1321 gvrkfnvnte vrkaymesls spkgdlvhvm astieamkav vaekmhlfgs agka
//
LOCUS       XP_016691155            1373 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691155
VERSION     XP_016691155.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835666.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691155.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1373
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=147364
     Region          1..1373
                     /region_name="PLN02858"
                     /note="fructose-bisphosphate aldolase"
                     /db_xref="CDD:215463"
     CDS             1..1373
                     /gene="LOC107908489"
                     /coded_by="XM_016835666.2:97..4218"
                     /db_xref="GeneID:107908489"
ORIGIN      
        1 magvigfvgl dqlsldmaas llragykvqa fevqnllmne flklggtecf slreagkgva
       61 alivlishvd qindiifghd salkglqkdt viilhstils shiqnleknl redglttsvv
      121 dayvfkatse llngkimvis sgrsdaiska ypflsamsek lytfegetga gsktklvtel
      181 legihliaav eaislgvkag ihpwiiydii snaagnswvf knyipqllsg nvkynflnpf
      241 nhklgivldi aklltfplpl lasahqqlal gsllghgddn tplgqvwdqv fgvhtvdaan
      301 aerynpeela tqitakskav nrvgfiglga mgfgmatylv ksnfcvvgyd vykptltrfe
      361 saggligssp edvskgvdvl vvmvtneaqa esvlfgdlga vsalpsgasi ilsstvspay
      421 viqlerrlkn egkdlklvda pvsggvkras mgeltimaag sddalksagl ilsalsekly
      481 vikggcgags gvkmvnqlla gvhiaasaea mafgarlgls trmlfdiisn sgatswmfen
      541 rvphmldndy tpysaldifv kdlgivarec sahkiplhis tiahqlfiag saagwgrqdd
      601 agvvkvyetl tgvkvegklp alkkevvlqs lppewpvdpi ndihklnqkn srtlvvlddd
      661 ptgtqtvhdv evltewsiks lveqfrkkpi cfyiltnsra lssekatvli kdicnnlcsa
      721 aksvqhidyt vvlrgdstlr ghfpeepdaa vsllgqvdaw ilcpfflqgg rytiddihyv
      781 adsdrlvpag dtefandaaf gykssnlrew veektagrip assvasisiq llrkggpdav
      841 cellcslekg stcivnavse rdmavfaagm iqaelkgksf lcrsaasfvs arigiipkap
      901 irpkdlgisk ersgglivvg syvpkttkqv eelhsqhghm lkslevsvhk vamksseere
      961 eeinrtaema svflaarkdt limssrelit gktaseslei nfkvssalve vvrrittrpr
     1021 yilakggits sdlatkalea krakvvgqal agiplwelgh esrhpgvpyi vfpgnvgdsk
     1081 alvevvrswa hplrlsstkk ilinaekggy avgafnvynm egvkavvsaa eqerspailq
     1141 vhpgafkqgg vtlvaccisa aeeasvpitv hfdhgtskqe lleslelgfd svmvdgshlp
     1201 fkdnisytkh isnlahlrdm lveaelgkls gteddltved yeakltdinq aeefivetgi
     1261 dalavcignv hgkypasgpn lkldllkdly alsskkgvfl vlhgasglsk elvkgcierg
     1321 vrkfnvntev rkaymeslss pkgdlvhvma stieamkavv aekmhlfgsa gka
//
LOCUS       XP_016691156             197 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L19-1 [Gossypium hirsutum].
ACCESSION   XP_016691156
VERSION     XP_016691156.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835667.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..197
                     /product="60S ribosomal protein L19-1"
                     /calculated_mol_wt=22731
     Region          4..166
                     /region_name="Ribosomal_L19e"
                     /note="Ribosomal protein L19e. L19e is found in the large
                     ribosomal subunit of eukaryotes and archaea. L19e is
                     distinct from the ribosomal subunit L19, which is found in
                     prokaryotes. It consists of two small globular domains
                     connected by an extended segment; cl00232"
                     /db_xref="CDD:444771"
     Site            order(4,8..9,18..24,26,29,38,42,53,55..56,57..58,60,62,
                     64..65,66..67,69,73..78,80..82,87..88,91,94..96,99..100,
                     102,109,116..117,119..120,123..124,130,133..134)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238268"
     Site            28..47
                     /site_type="active"
                     /note="putative translocon docking site [active]"
                     /db_xref="CDD:238268"
     Site            order(111..112,114..118,138..142,144..148)
                     /site_type="active"
                     /note="putative intersubunit bridge [active]"
                     /db_xref="CDD:238268"
     CDS             1..197
                     /gene="LOC107908490"
                     /coded_by="XM_016835667.2:143..736"
                     /db_xref="GeneID:107908490"
ORIGIN      
        1 mvslkvqkrl aasllncgkg kvwldpceal lismansrmd irklvkdnli ikkpnisrsg
       61 wryrkgkdvg nprrkgygkr kgtkeatlps klswmrrarv lrrllrkyre mkkidkhlyh
      121 efymkakgsv fkhkrallea lhnkaksekd qkvhfdqvia ikamgklgsk etrvprrkqc
      181 lsppvevidv lnnaylv
//
LOCUS       XP_016691153             713 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase 11-interacting protein [Gossypium
            hirsutum].
ACCESSION   XP_016691153
VERSION     XP_016691153.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835664.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691153.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..713
                     /product="serine/threonine-protein kinase 11-interacting
                     protein"
                     /calculated_mol_wt=79619
     Region          136..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <168..327
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          195..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          217..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          241..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          262..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..713
                     /gene="LOC107908488"
                     /coded_by="XM_016835664.2:195..2336"
                     /db_xref="GeneID:107908488"
ORIGIN      
        1 mpmaivtrgr yleklfkfvd dqagplidgt kvlklnpagl hyvqsrlqal qeldrllvga
       61 pvdylrayvs dlgdhraleq lrrilrlltt lkvvsalapl ardptplsll pfgrlkvlel
      121 rgcdlstsaa kgllelrhtl ekiichnstd alrhvfasri aevkgcpqwn rlsfvscacn
      181 clllmdeslq llpsvetldl srnkfakvdn lqkcanlkhl dlgfnqlrsi ssfsevcchv
      241 vklvlrnnal stlrgienlk slegldvscn iisnfselef ivglsflqsv wlegnplcca
      301 rwyraqvfsy fshpenlkld dkeinttdyw krkiivasrq krpssfgfys pakddaegag
      361 cinkkrimvs rlacieseqd styfcsdlds vscgnetqsr ekilsedlae ivdlinrveq
      421 lkkersilwl qefkdwivha sknsadggnf natmlhpqkq nykksgkskr hliessrris
      481 ksiqasgdes rlsvlesdgs fadtstgmha ngyfdhifpp gitggfslpg lrttdikqey
      541 qnnylhdets sgsmqaesah hgifsvqgdn rmlenasvsq lsttdtimes nsssaypgsp
      601 phyqndllhr rlnlveeilq lsaesysvas sdsdtscted dyceaglsvl enhnrsvegh
      661 ssshpfeedy yekqnkilql sendiclids caeqtfsttk iigtdqttqc pvt
//
LOCUS       XP_016691151             494 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphoethanolamine N-methyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016691151
VERSION     XP_016691151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835662.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..494
                     /product="phosphoethanolamine N-methyltransferase 1"
                     /calculated_mol_wt=55891
     Region          19..493
                     /region_name="PLN02336"
                     /note="phosphoethanolamine N-methyltransferase"
                     /db_xref="CDD:177970"
     CDS             1..494
                     /gene="LOC107908485"
                     /coded_by="XM_016835662.2:269..1753"
                     /db_xref="GeneID:107908485"
ORIGIN      
        1 maangfvgde rkvqknywie hsvdltveam mldskaadid keerpevlsl lppyegktil
       61 elgagigrft gdlakkaghv ialdfienvi kknetinghy knvkflcadv tspdlafteg
      121 sldlifsnwl lmylsdkeve nlaermlkwl kvgghiffre scfhqsgdck rknnpthyre
      181 prfytkvfke cqatddsgns felslvgckc igayvknkkn qnqicwifqk vvsdndkgfq
      241 rfldsvqyks nsilryervf gpgyvstggi ettkefvgkl dlkpgqkvld vgcgigggdi
      301 ymaeefdvhv vgidlsvnmi sfaleratgl kcsvefevad cpkkvypdns fdviysrdti
      361 lhihdkpalf rsfykwlkpg gkllisdyck ssktpstefa ayikqrgydl hdvksygqml
      421 edagfdvila edrtdqflqv lqrelnqvek ekdafisdfs kedydeivgg wkaklirsss
      481 geqrwglfla kkkn
//
LOCUS       XP_040944577             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944577
VERSION     XP_040944577.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088643.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088643.1:1366..1857"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_040944578             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944578
VERSION     XP_040944578.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088644.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088644.1:1342..1833"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_040944579             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944579
VERSION     XP_040944579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088645.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088645.1:427..918"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_040944580             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944580
VERSION     XP_040944580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088646.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088646.1:381..872"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_040944581             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944581
VERSION     XP_040944581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088647.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088647.1:414..905"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_040944582             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944582
VERSION     XP_040944582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088648.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088648.1:435..926"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_040944583             163 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML27 [Gossypium hirsutum].
ACCESSION   XP_040944583
VERSION     XP_040944583.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088649.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="probable calcium-binding protein CML27"
                     /calculated_mol_wt=17871
     Region          15..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..163
                     /gene="LOC107908484"
                     /coded_by="XM_041088649.1:1587..2078"
                     /db_xref="GeneID:107908484"
ORIGIN      
        1 msatptqkss nvnqeelqkv fnqfdanrdg kisvtelrdv lksmgssite eelkrvledi
       61 dtdkdgfinl sefsslfrss sdevtaalel rdafdlydqd knglistsel hlvlnqlgmk
      121 csvddcarmi ksvdsdgdgn vnfeefqkmm saslaangkg skp
//
LOCUS       XP_016691148             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691148
VERSION     XP_016691148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835659.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=35231
     Region          24..252
                     /region_name="DUF1295"
                     /note="Protein of unknown function (DUF1295); pfam06966"
                     /db_xref="CDD:399743"
     CDS             1..308
                     /gene="LOC107908481"
                     /coded_by="XM_016835659.2:259..1185"
                     /db_xref="GeneID:107908481"
ORIGIN      
        1 matvldshfl altaivtlgy qifffiital lkfdkvtdfa gstnfviiav ltliikgswh
       61 frqvvltslv viwglrlaif llmrilqwge drrfdemrsn lgklavfwif qavwvwtvtl
      121 pvtvvnasdr dpsvqaedii gwimwsvgis feaaadqqkl sfknspenrg kwcnvgvwky
      181 srhpnyfgei flwwgifvas tpilegaewl vilgpifltl lllfvsglpl leesadkkfg
      241 nvaayriyke ttspliplpq svygnlplwf kaiflfefpf ysrslppegl nwcrmrqeet
      301 kdelkmgk
//
LOCUS       XP_016691149             291 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016691149
VERSION     XP_016691149.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835660.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..291
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=33080
     Region          24..252
                     /region_name="DUF1295"
                     /note="Protein of unknown function (DUF1295); pfam06966"
                     /db_xref="CDD:399743"
     CDS             1..291
                     /gene="LOC107908481"
                     /coded_by="XM_016835660.2:656..1531"
                     /db_xref="GeneID:107908481"
ORIGIN      
        1 matvldshfl altaivtlgy qifffiital lkfdkvtdfa gstnfviiav ltliikgswh
       61 frqvvltslv viwglrlaif llmrilqwge drrfdemrsn lgklavfwif qavwvwtvtl
      121 pvtvvnasdr dpsvqaedii gwimwsvgis feaaadqqkl sfknspenrg kwcnvgvwky
      181 srhpnyfgei flwwgifvas tpilegaewl vilgpifltl lllfvsglpl leesadkkfg
      241 nvaayriyke ttspliplpq svygnlplwf kaiflfefpf ysrslppegl n
//
LOCUS       XP_016691144             496 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione reductase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016691144
VERSION     XP_016691144.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835655.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691144.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..496
                     /product="glutathione reductase, chloroplastic"
                     /calculated_mol_wt=53604
     Region          1..496
                     /region_name="PLN02507"
                     /note="glutathione reductase"
                     /db_xref="CDD:215281"
     CDS             1..496
                     /gene="LOC107908477"
                     /coded_by="XM_016835655.2:345..1835"
                     /db_xref="GeneID:107908477"
ORIGIN      
        1 markmlvdee mnqtnqeeay ydfdlfviga gsggvraarf sanygakvgi celpfhpiss
       61 eviggvggtc virgcvpkki lvygaafgse ledarnygwd lnekldfnwk kllhkktdei
      121 irlngiykrl lsnagvklfe gegkivgpne vevtqldgtk lsysakhili atgsrahrpp
      181 ipgqelgits dealsledlp khavvfgggy iavefasiwr glganvdlff rkelplrgfd
      241 demravvarn legrginlhp qtnltelikt dngikvttdh geeliadvvl fatgrlpnsk
      301 rlnleavgve ldntgavkvd eysrtsipsi wavgdvtnrm nltpvalmeg tcfaktvfgk
      361 epskpdyshv pcavfsippl svvglseeqa ieqangdvlv ftstfnpmkn tvsgrqektv
      421 mklvvdaetd kvlgasmcgp dapeimqgia valkcgatka qfdstvgihp saaeefvtmr
      481 svsrritcsg kpktnl
//
LOCUS       XP_016691145             496 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione reductase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016691145
VERSION     XP_016691145.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835656.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691145.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..496
                     /product="glutathione reductase, chloroplastic"
                     /calculated_mol_wt=53604
     Region          1..496
                     /region_name="PLN02507"
                     /note="glutathione reductase"
                     /db_xref="CDD:215281"
     CDS             1..496
                     /gene="LOC107908477"
                     /coded_by="XM_016835656.2:297..1787"
                     /db_xref="GeneID:107908477"
ORIGIN      
        1 markmlvdee mnqtnqeeay ydfdlfviga gsggvraarf sanygakvgi celpfhpiss
       61 eviggvggtc virgcvpkki lvygaafgse ledarnygwd lnekldfnwk kllhkktdei
      121 irlngiykrl lsnagvklfe gegkivgpne vevtqldgtk lsysakhili atgsrahrpp
      181 ipgqelgits dealsledlp khavvfgggy iavefasiwr glganvdlff rkelplrgfd
      241 demravvarn legrginlhp qtnltelikt dngikvttdh geeliadvvl fatgrlpnsk
      301 rlnleavgve ldntgavkvd eysrtsipsi wavgdvtnrm nltpvalmeg tcfaktvfgk
      361 epskpdyshv pcavfsippl svvglseeqa ieqangdvlv ftstfnpmkn tvsgrqektv
      421 mklvvdaetd kvlgasmcgp dapeimqgia valkcgatka qfdstvgihp saaeefvtmr
      481 svsrritcsg kpktnl
//
LOCUS       XP_016691146             496 aa            linear   PLN 06-AUG-2024
DEFINITION  glutathione reductase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016691146
VERSION     XP_016691146.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835657.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691146.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..496
                     /product="glutathione reductase, chloroplastic"
                     /calculated_mol_wt=53604
     Region          1..496
                     /region_name="PLN02507"
                     /note="glutathione reductase"
                     /db_xref="CDD:215281"
     CDS             1..496
                     /gene="LOC107908477"
                     /coded_by="XM_016835657.2:157..1647"
                     /db_xref="GeneID:107908477"
ORIGIN      
        1 markmlvdee mnqtnqeeay ydfdlfviga gsggvraarf sanygakvgi celpfhpiss
       61 eviggvggtc virgcvpkki lvygaafgse ledarnygwd lnekldfnwk kllhkktdei
      121 irlngiykrl lsnagvklfe gegkivgpne vevtqldgtk lsysakhili atgsrahrpp
      181 ipgqelgits dealsledlp khavvfgggy iavefasiwr glganvdlff rkelplrgfd
      241 demravvarn legrginlhp qtnltelikt dngikvttdh geeliadvvl fatgrlpnsk
      301 rlnleavgve ldntgavkvd eysrtsipsi wavgdvtnrm nltpvalmeg tcfaktvfgk
      361 epskpdyshv pcavfsippl svvglseeqa ieqangdvlv ftstfnpmkn tvsgrqektv
      421 mklvvdaetd kvlgasmcgp dapeimqgia valkcgatka qfdstvgihp saaeefvtmr
      481 svsrritcsg kpktnl
//
LOCUS       XP_016691147             332 aa            linear   PLN 06-AUG-2024
DEFINITION  extensin [Gossypium hirsutum].
ACCESSION   XP_016691147
VERSION     XP_016691147.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835658.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691147.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="extensin"
                     /calculated_mol_wt=35616
     Region          <97..244
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          244..328
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..332
                     /gene="LOC107908478"
                     /coded_by="XM_016835658.2:113..1111"
                     /db_xref="GeneID:107908478"
ORIGIN      
        1 menrlcmfll fstmaatlsm hcdarksmeh ikdpkhqrns iikhtknlel msklmslvie
       61 qptdtsntqp ygvsspfslp pfdslppens hpycvnppnt peppigtsps ppspfynfpp
      121 lgpppsppgi vpnppiifpg ppgivpnpps nfpgppgivp nppsifpspp qaiptptgyi
      181 pspsgpvlsp pyyelspptv vvsppynvps pfgfnpsppe flppivyppp tvlphpnrap
      241 ttqlwcvakp svpgpimqea mnyacasgad cdsiqpsgpc fqpdtifaha syafnsywqk
      301 tkiaggtcef ggtamlvtvd psydgchfey qy
//
LOCUS       XP_016691142             775 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG_HOMOLOG isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016691142
VERSION     XP_016691142.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835653.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691142.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..775
                     /product="transcriptional corepressor LEUNIG_HOMOLOG
                     isoform X1"
                     /calculated_mol_wt=84269
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          490..775
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(497,515,519,525..526,538..539,557,561,567..568,
                     581..582,600,605,611..612,625,640,644,650..651,663..664,
                     682,686,691..692,704..705,724,733..734,745..746,764,768,
                     774..775)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          501..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          544..581
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          586..621
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          627..661
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          668..703
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          711..744
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          750..774
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..775
                     /gene="LOC107908476"
                     /coded_by="XM_016835653.2:442..2769"
                     /db_xref="GeneID:107908476"
ORIGIN      
        1 maqsnweadk mldvyiydyl vkkklhttak sfmtegkvap dpvaidapgg flfewwsvfw
       61 difisrtndk hseaaaayie aqqikakeqq qlqmqqlqlm rqaqlqrrdp nnpsmvgpvn
      121 aigsegmlgq snasalaakm yeermkqpna vtsetsqpll darmallksa tnhpgqlvqg
      181 nhgdvtaalq qiqdikgevn lggtqrsmpm dpssiygqgi mqlkpgigna glnpgvgslp
      241 lkgwpltgid qirpslgaqv qkpflqnanq fqllpqqqqq llaqvqtqgn lgnsplygdm
      301 dpqrfsglsr salntkegqp tvndgsigsp mqstsskqis mppirqsssq qdplqspqvq
      361 qnnrkrkgps sgpanstgtg ntlgpspnsq pstpsthtpg egaamvgnmq hgssmsknlm
      421 mygsdgtagi asstnqledm ehfgdvgsld dnvesflshd dgdggnlfgt lkrnpsehtt
      481 etsksfgfne vgsirksngk vtcchfssdg kllasaghdk kavlwnmetl ktdctteeht
      541 hiitdirfrp nstqlatssf dttvriwdaa qpsysiwkyt ghtaqvmsld fhpkknelfc
      601 scdgnseirf wninqysctr iskggstnvr fqprtgqfla aaadnvvsif dvetdrrtql
      661 fqghntevhs lcwdangdfl asvsqesvrl wslssgecin elsssgnkfh scvfhpnfpa
      721 llviggyqsl elwntaenkc ltisahdcvi salaqsqvtg mvasasydks vkiwk
//
LOCUS       XP_016691143             774 aa            linear   PLN 06-AUG-2024
DEFINITION  transcriptional corepressor LEUNIG_HOMOLOG isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016691143
VERSION     XP_016691143.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835654.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691143.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..774
                     /product="transcriptional corepressor LEUNIG_HOMOLOG
                     isoform X2"
                     /calculated_mol_wt=84140
     Region          11..35
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          489..774
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(496,514,518,524..525,537..538,556,560,566..567,
                     580..581,599,604,610..611,624,639,643,649..650,662..663,
                     681,685,690..691,703..704,723,732..733,744..745,763,767,
                     773..774)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          500..537
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          543..580
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          585..620
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          626..660
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          667..702
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          710..743
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          749..773
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..774
                     /gene="LOC107908476"
                     /coded_by="XM_016835654.2:442..2766"
                     /db_xref="GeneID:107908476"
ORIGIN      
        1 maqsnweadk mldvyiydyl vkkklhttak sfmtegkvap dpvaidapgg flfewwsvfw
       61 difisrtndk hseaaaayie aqqikakeqq qlqmqqlqlm rqaqlqrrdp nnpsmvgpvn
      121 aigsegmlgq snasalaakm yeermkqpna vtsetsqpll darmallksa tnhpgqlvqg
      181 nhgdvtaalq qiqdikgevn lggtqrsmpm dpssiygqgi mqlkpgigna glnpgvgslp
      241 lkgwpltgid qirpslgaqv qkpflqnanq fqllpqqqqq llaqvqtqgn lgnsplygdm
      301 dpqrfsglsr salntkegqp tvndgsigsp mqstsskism ppirqsssqq dplqspqvqq
      361 nnrkrkgpss gpanstgtgn tlgpspnsqp stpsthtpge gaamvgnmqh gssmsknlmm
      421 ygsdgtagia sstnqledme hfgdvgsldd nvesflshdd gdggnlfgtl krnpsehtte
      481 tsksfgfnev gsirksngkv tcchfssdgk llasaghdkk avlwnmetlk tdctteehth
      541 iitdirfrpn stqlatssfd ttvriwdaaq psysiwkytg htaqvmsldf hpkknelfcs
      601 cdgnseirfw ninqysctri skggstnvrf qprtgqflaa aadnvvsifd vetdrrtqlf
      661 qghntevhsl cwdangdfla svsqesvrlw slssgecine lsssgnkfhs cvfhpnfpal
      721 lviggyqsle lwntaenkcl tisahdcvis alaqsqvtgm vasasydksv kiwk
//
LOCUS       XP_016691141             484 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase PRT1 [Gossypium hirsutum].
ACCESSION   XP_016691141
VERSION     XP_016691141.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835652.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..484
                     /product="E3 ubiquitin-protein ligase PRT1"
                     /calculated_mol_wt=54383
     Region          51..102
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(55,58,70,72,75,78,91,94)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          235..279
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(238,241,253,255,258,261,272,275)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          344..400
                     /region_name="ZZ"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin, CBP/p300 and many other proteins. The ZZ motif
                     coordinates one or two zinc ions and most likely
                     participates in ligand binding or molecular scaffolding.
                     Many proteins containing ZZ motifs have...; cl00295"
                     /db_xref="CDD:412288"
     Site            order(346,349,361,364,373,376,391,395)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239069"
     Site            order(346,349,373,376)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239069"
     Site            order(347,358,360,369,371)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239069"
     Site            order(359,377,397,400)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239069"
     Site            order(361,364,391,395)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239069"
     CDS             1..484
                     /gene="LOC107908475"
                     /coded_by="XM_016835652.2:96..1550"
                     /db_xref="GeneID:107908475"
ORIGIN      
        1 mekeektnin idetltetmk decleqhqqr kgeaegerea tndlpseeff defqccicle
       61 llykpvvlac ghmscfwcvy namnhvhesh cpicrcpynh fpsvcqmlhf lllklypvay
      121 nrrerqvree ekraghfslq fdqnlvepnl censdilrnn ntcahlqmdg hsescsnvle
      181 sssfrdspkt tmedengims nseslevdav alnqgktsls ndsehrdekv vsvadllcaa
      241 cnrllfrpvv lncghvycet clvipkdeml rcqvckslqp ngfpgvclil hhflakqfpe
      301 eysarlkepn ctqaprcanq ltsissdvys swffgngpkv hvavgcdycg mspiigeryk
      361 ckdcvekigf dlcescyksp atipgrfnqq hkpdhqfkiv qplsirdlml rlnseqsddd
      421 ddggsdaseh mdgashtpgm qadesngvsq epedisplif svdvsldqed nsedpsdnis
      481 sglt
//
LOCUS       XP_016691140            1007 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome non-ATPase regulatory subunit 1 homolog A [Gossypium
            hirsutum].
ACCESSION   XP_016691140
VERSION     XP_016691140.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835651.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691140.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1007
                     /product="26S proteasome non-ATPase regulatory subunit 1
                     homolog A"
                     /calculated_mol_wt=109661
     Region          7..1007
                     /region_name="RPN2"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5116"
                     /db_xref="CDD:227446"
     Region          582..606
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(598..599,602,605..606,634..635,638,641..642,645,
                     668..669,672,675..676,679,703..704,707,710..711)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          616..645
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          652..680
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          685..711
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1007
                     /gene="LOC107908474"
                     /coded_by="XM_016835651.2:59..3082"
                     /db_xref="GeneID:107908474"
ORIGIN      
        1 maaaaatmvs saggllamln eshpqlklha lsnlvsfvdq fwpeistsvp iieslyedee
       61 fdqhqrqlaa llvskvfyyl gelndslsya lgagplfdvs edsdyvhtll skaideyasf
      121 rskaaessae vasvdprlea ivermldrcl mdgkyhqamg iaiecrrldk leeaitrsdn
      181 vhltlaysin vshsyvyrre yrqevlrllv kvyqqlpspd ylsicqclmf ldepegvani
      241 lekllrsetk edallafqva fdlvenehqa fllnvrdrlp ppkslpsese qpgstdsapa
      301 qneystapdv qmtdgssasm tnmhdadpke vvyaerlnki kgilsgetsi qltlqflysh
      361 nksdllilkt ikqsvemrns vchtatiyan aimhagttvd tflrenldwl sratnwakfs
      421 ataglgvihr ghlqqgrslm apylpqgaag gggspysegg alyalgliha nhgegikqfl
      481 rdslsntnie viqhgaclgl glaalgtade eiyddiksvl ytdsavagea agismgllmv
      541 gtasekasem layahetqhe kiirglalgi altvygreee adtlieqmtl dqdpilrygg
      601 myalalayrg tannkairhl lhfavsdvsd dvrrtavlal gfvlysepeq tprivsllse
      661 synphvryga alavgiscag tglseaiall epltsdvvdf vrqgaliama mvmiqvneas
      721 dsrvgtfrrq lekiildkhe dtmskmgail asgildaggr nvtirllskt khdkvtavvg
      781 favfsqfwyw ypliyfvsls fsptaligln ydlrvprfef lshskpslfe ypkpttvptt
      841 tsavklptav lstsakakar akkeaeqkan aekssgqess stapntgkek ssgekdream
      901 qvdgppekkt epepsfeilt nparvvpaqe kfikfldgry vpvkaapsgf illkdncpne
      961 peelsltdap attspaggsa agqqqsssla mavddepqpp qpfeyts
//
LOCUS       XP_016691139             206 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L13a-4 [Gossypium hirsutum].
ACCESSION   XP_016691139
VERSION     XP_016691139.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835650.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="60S ribosomal protein L13a-4"
                     /calculated_mol_wt=23502
     Region          10..194
                     /region_name="Ribosomal_L13"
                     /note="Ribosomal protein L13. Protein L13, a large
                     ribosomal subunit protein, is one of five proteins
                     required for an early folding intermediate of 23S rRNA in
                     the assembly of the large subunit. L13 is situated on the
                     bottom of the large subunit, near the...; cl00333"
                     /db_xref="CDD:469724"
     Site            order(20,22..23,26,29,33,49,51,79..80,86..88,90..92,94,
                     96..97,99,101,105,108..109)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238230"
     Site            80
                     /site_type="other"
                     /note="L3 interface [polypeptide binding]"
                     /db_xref="CDD:238230"
     CDS             1..206
                     /gene="LOC107908472"
                     /coded_by="XM_016835650.2:141..761"
                     /db_xref="GeneID:107908472"
ORIGIN      
        1 mvsgsgicak rvvvdarhhm lgrlasilak ellngqkvvv vrceeicmsg glvrqkmkym
       61 rflrkrmntk pshgpihfra pakilwrtir gmiphktkrg aaalarlkay egipapydki
      121 krmvipdalk vlrlqkghky cllgklssev gwnhydtike lerkrkeraq vayerrkqlt
      181 klrvkaekva eeklgtqlev ispiey
//
LOCUS       XP_016690872             237 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690872
VERSION     XP_016690872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..237
                     /product="uncharacterized protein"
                     /calculated_mol_wt=26700
     Region          11..213
                     /region_name="DUF599"
                     /note="Protein of unknown function, DUF599; pfam04654"
                     /db_xref="CDD:461381"
     CDS             1..237
                     /gene="LOC107908123"
                     /coded_by="XM_016835383.2:117..830"
                     /db_xref="GeneID:107908123"
ORIGIN      
        1 mewrscyldm vlvplslams layhwwlwrk vrsqplttii gtnargrrfw afaimkdnek
       61 knilavqtlr ntimgstlma ttsillcagl aavisstysi krplndsifg ahgefmvslk
      121 yvtilsfflf sffcysfsir finqvnvlin spqdpasvit pmyvsellek afilntvgnr
      181 lfytalplll wifgpllvfl csftlipvly nldlvlgfkk qgktesqing cgdcesv
//
LOCUS       XP_016690473             206 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein, partial [Gossypium hirsutum].
ACCESSION   XP_016690473
VERSION     XP_016690473.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016834984.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690473.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..206
                     /product="uncharacterized protein"
     Region          <12..167
                     /region_name="DUF599"
                     /note="Protein of unknown function, DUF599; pfam04654"
                     /db_xref="CDD:461381"
     CDS             1..206
                     /gene="LOC107907644"
                     /coded_by="XM_016834984.2:<1..621"
                     /db_xref="GeneID:107907644"
ORIGIN      
        1 lnkydacglq dnekrnilav qtlrntikgs tlmattfils caglvvvins tynvrrplng
       61 sifkahneft vslkyitils fflfsffcys lsirfinqvn ilinspqdla svitlkyask
      121 llekvfilnt vdnwllytal plllwifgpf liflcsfsli hvlynldlvl rfkkqgknks
      181 qingcgdcel vkycticcnl syilln
//
LOCUS       XP_016691137             703 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 7 [Gossypium hirsutum].
ACCESSION   XP_016691137
VERSION     XP_016691137.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835648.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691137.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..703
                     /product="myosin-binding protein 7"
                     /calculated_mol_wt=79662
     Region          254..342
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..703
                     /gene="LOC107908471"
                     /coded_by="XM_016835648.2:198..2309"
                     /db_xref="GeneID:107908471"
ORIGIN      
        1 macnvinswt ftalvgafld lsiaylllcg stlaylaskf lglfgkslpc pcngsfghph
       61 knycfqsmlv nnphlkissv qssvkkkipf dsiwnnfyne dkddwhsnfd nwrngdvamg
      121 geamfssscn skkntirani grfgyqrpri glrqrkrvan gyggkflsfp ndplasintt
      181 ptglnpsitt pddsedgret skeiqlpkqg lqgfeiddds ftenkiekep avaefkclmp
      241 dwnfdgsdkn aiveqalgee ndaraalyle lekeriaaat aadeamamil rlqeekatie
      301 mearqyqrmi eekfaydaee mnilkeillr rerekhflek eveafkqmfc ekevsdmdmy
      361 dmaaiydqkt lnlgqlvmsk kiaesvgeke ktvhnidvse yamgsigsld havdfgnelp
      421 vselnedtas lnysieknhs npsrndyeis qkfeargmtc enenpghqrs yvqsnlstth
      481 srsdllerai ntvaeeeqnr etsphqcltp kateakiifp ynnekmekhg edlhqidsgi
      541 nyqildvhvi ndesdlcrtc nnqtigglet epyrrsssld rpgrlppcgp srvkslppis
      601 rrnsmsafdy erlkidnevd wlrerlkivq kgreklnfps grkkgehfql qilenlasql
      661 reiqqltepr kalrraslph pfskvmskkk nqrgvlggvl rsv
//
LOCUS       XP_040944585             476 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 15 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944585
VERSION     XP_040944585.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088651.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..476
                     /product="high mobility group B protein 15 isoform X1"
                     /calculated_mol_wt=52905
     Region          38..122
                     /region_name="ARID_HMGB9-like"
                     /note="ARID/BRIGHT DNA binding domain of Arabidopsis
                     thaliana high mobility group B proteins HMGB9, HMGB10,
                     HMGB11, HMGB15 and similar proteins; cd16872"
                     /db_xref="CDD:350636"
     Site            order(57..63,88,90..91,94,105,107..109,111)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350636"
     Region          229..437
                     /region_name="NHP6B"
                     /note="Chromatin-associated proteins containing the HMG
                     domain [Chromatin structure and dynamics]; COG5648"
                     /db_xref="CDD:227935"
     Region          266..365
                     /region_name="HMG-box_AtHMGB9-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 9 (HMGB9) and
                     similar proteins; cd22009"
                     /db_xref="CDD:438825"
     Site            order(267..268,270..274,277..278,285,296..297,300,
                     303..304,311,348,351,355,358)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438825"
     CDS             1..476
                     /gene="LOC107908468"
                     /coded_by="XM_041088651.1:167..1597"
                     /db_xref="GeneID:107908468"
ORIGIN      
        1 mastsfakqt vvpmkepssn ynpyppplar yedvaacpkl flstleklha tmgtkfmipi
       61 iggkeldlhk lfvevtsrgg iekiikerrw kevtaifnfp statnasfvl rkyylsllhh
      121 yeqiyffkar gwvpvssdpf rsqsitqiht qgairpaidv haaavqqprv niadspaaar
      181 qsttagspvi gvidgkfesg ylvtvtigse klkgvlyqas ddaapeaphc ygafssqsvt
      241 platsgvqrr rrrkkseikr rdpahpkpnr sgynfffaeq harlkplhpg qdreisrmig
      301 eqwnkltese ksvramlysi iplcslfydl flnsyclhgl lsyiqvyqek aledkeryrv
      361 emedyreklr tgqvlgnalp lpqqlpgmdv gmaeadmkld eteggespqt pendsssdgs
      421 dfeddktadk gldieesqfa gvvgdvdadi saeeaaelsk vddnvghnsq vekfsi
//
LOCUS       XP_040944586             476 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 15 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944586
VERSION     XP_040944586.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088652.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..476
                     /product="high mobility group B protein 15 isoform X1"
                     /calculated_mol_wt=52905
     Region          38..122
                     /region_name="ARID_HMGB9-like"
                     /note="ARID/BRIGHT DNA binding domain of Arabidopsis
                     thaliana high mobility group B proteins HMGB9, HMGB10,
                     HMGB11, HMGB15 and similar proteins; cd16872"
                     /db_xref="CDD:350636"
     Site            order(57..63,88,90..91,94,105,107..109,111)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350636"
     Region          229..437
                     /region_name="NHP6B"
                     /note="Chromatin-associated proteins containing the HMG
                     domain [Chromatin structure and dynamics]; COG5648"
                     /db_xref="CDD:227935"
     Region          266..365
                     /region_name="HMG-box_AtHMGB9-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 9 (HMGB9) and
                     similar proteins; cd22009"
                     /db_xref="CDD:438825"
     Site            order(267..268,270..274,277..278,285,296..297,300,
                     303..304,311,348,351,355,358)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438825"
     CDS             1..476
                     /gene="LOC107908468"
                     /coded_by="XM_041088652.1:150..1580"
                     /db_xref="GeneID:107908468"
ORIGIN      
        1 mastsfakqt vvpmkepssn ynpyppplar yedvaacpkl flstleklha tmgtkfmipi
       61 iggkeldlhk lfvevtsrgg iekiikerrw kevtaifnfp statnasfvl rkyylsllhh
      121 yeqiyffkar gwvpvssdpf rsqsitqiht qgairpaidv haaavqqprv niadspaaar
      181 qsttagspvi gvidgkfesg ylvtvtigse klkgvlyqas ddaapeaphc ygafssqsvt
      241 platsgvqrr rrrkkseikr rdpahpkpnr sgynfffaeq harlkplhpg qdreisrmig
      301 eqwnkltese ksvramlysi iplcslfydl flnsyclhgl lsyiqvyqek aledkeryrv
      361 emedyreklr tgqvlgnalp lpqqlpgmdv gmaeadmkld eteggespqt pendsssdgs
      421 dfeddktadk gldieesqfa gvvgdvdadi saeeaaelsk vddnvghnsq vekfsi
//
LOCUS       XP_040944587             475 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 15 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944587
VERSION     XP_040944587.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088653.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..475
                     /product="high mobility group B protein 15 isoform X2"
                     /calculated_mol_wt=52834
     Region          38..122
                     /region_name="ARID_HMGB9-like"
                     /note="ARID/BRIGHT DNA binding domain of Arabidopsis
                     thaliana high mobility group B proteins HMGB9, HMGB10,
                     HMGB11, HMGB15 and similar proteins; cd16872"
                     /db_xref="CDD:350636"
     Site            order(57..63,88,90..91,94,105,107..109,111)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350636"
     Region          228..436
                     /region_name="NHP6B"
                     /note="Chromatin-associated proteins containing the HMG
                     domain [Chromatin structure and dynamics]; COG5648"
                     /db_xref="CDD:227935"
     Region          265..364
                     /region_name="HMG-box_AtHMGB9-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 9 (HMGB9) and
                     similar proteins; cd22009"
                     /db_xref="CDD:438825"
     Site            order(266..267,269..273,276..277,284,295..296,299,
                     302..303,310,347,350,354,357)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438825"
     CDS             1..475
                     /gene="LOC107908468"
                     /coded_by="XM_041088653.1:167..1594"
                     /db_xref="GeneID:107908468"
ORIGIN      
        1 mastsfakqt vvpmkepssn ynpyppplar yedvaacpkl flstleklha tmgtkfmipi
       61 iggkeldlhk lfvevtsrgg iekiikerrw kevtaifnfp statnasfvl rkyylsllhh
      121 yeqiyffkar gwvpvssdpf rsqsitqiht qgairpaidv haaavqqprv niadspaarq
      181 sttagspvig vidgkfesgy lvtvtigsek lkgvlyqasd daapeaphcy gafssqsvtp
      241 latsgvqrrr rrkkseikrr dpahpkpnrs gynfffaeqh arlkplhpgq dreisrmige
      301 qwnkltesek svramlysii plcslfydlf lnsyclhgll syiqvyqeka ledkeryrve
      361 medyreklrt gqvlgnalpl pqqlpgmdvg maeadmklde teggespqtp endsssdgsd
      421 feddktadkg ldieesqfag vvgdvdadis aeeaaelskv ddnvghnsqv ekfsi
//
LOCUS       XP_016691134             443 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 15 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016691134
VERSION     XP_016691134.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835645.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..443
                     /product="high mobility group B protein 15 isoform X3"
                     /calculated_mol_wt=49052
     Region          38..122
                     /region_name="ARID_HMGB9-like"
                     /note="ARID/BRIGHT DNA binding domain of Arabidopsis
                     thaliana high mobility group B proteins HMGB9, HMGB10,
                     HMGB11, HMGB15 and similar proteins; cd16872"
                     /db_xref="CDD:350636"
     Site            order(57..63,88,90..91,94,105,107..109,111)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350636"
     Region          229..404
                     /region_name="NHP6B"
                     /note="Chromatin-associated proteins containing the HMG
                     domain [Chromatin structure and dynamics]; COG5648"
                     /db_xref="CDD:227935"
     Region          266..332
                     /region_name="HMG-box_AtHMGB9-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 9 (HMGB9) and
                     similar proteins; cd22009"
                     /db_xref="CDD:438825"
     Site            order(267..268,270..274,277..278,285,296..297,300,
                     303..304,311,315,318,322,325)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438825"
     CDS             1..443
                     /gene="LOC107908468"
                     /coded_by="XM_016835645.2:150..1481"
                     /db_xref="GeneID:107908468"
ORIGIN      
        1 mastsfakqt vvpmkepssn ynpyppplar yedvaacpkl flstleklha tmgtkfmipi
       61 iggkeldlhk lfvevtsrgg iekiikerrw kevtaifnfp statnasfvl rkyylsllhh
      121 yeqiyffkar gwvpvssdpf rsqsitqiht qgairpaidv haaavqqprv niadspaaar
      181 qsttagspvi gvidgkfesg ylvtvtigse klkgvlyqas ddaapeaphc ygafssqsvt
      241 platsgvqrr rrrkkseikr rdpahpkpnr sgynfffaeq harlkplhpg qdreisrmig
      301 eqwnkltese ksvyqekale dkeryrveme dyreklrtgq vlgnalplpq qlpgmdvgma
      361 eadmkldete ggespqtpen dsssdgsdfe ddktadkgld ieesqfagvv gdvdadisae
      421 eaaelskvdd nvghnsqvek fsi
//
LOCUS       XP_016691132            1004 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin carboxyl-terminal hydrolase 2 [Gossypium hirsutum].
ACCESSION   XP_016691132
VERSION     XP_016691132.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691132.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1004
                     /product="ubiquitin carboxyl-terminal hydrolase 2"
                     /calculated_mol_wt=110544
     Region          113..166
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          <174..1003
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          234..>387
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Region          <828..1002
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     CDS             1..1004
                     /gene="LOC107908467"
                     /coded_by="XM_016835643.2:181..3195"
                     /db_xref="GeneID:107908467"
ORIGIN      
        1 mgkrvkknrr vppkekkvva aqspkaipqe ktagiddvdd evkavkerkk clhfdkgini
       61 dklltklrss dpircedcre grndrrggkg kskhgkkkgs asvesksesk aiwvclecgh
      121 yvcagvglpt astshavrhl rqtrhhlvvq wdnpqlrwcf scnifipvek meenseskdv
      181 lyeivklike rssesstndv edvlsgsgsv icdiksegti snfldgkngy vvrglvnlgn
      241 tcffnsvmqn llalnrlrdy fsnldvsmgq ltismkklfa eirpemglkn ainpkpffas
      301 lcskapqfrg yqqhdshell rclldglyte elalkkhina sksdavtasq dltfvdavfg
      361 gqisstlcce ecghsstvye pfldlslsvp tkktpskkaq pvfrakktkl ppkkvgrnrg
      421 kvnkdvdqap akvvtapvpn sessgpghia vpqmepkvas sgdssrshaa gpstdesssa
      481 srnlfdvves qkeqvvestv kensagtddf awldyltten tlpendtgad dfswmdylqq
      541 eivadesdli sqnkntslqd seekelvpne alaescevsv lkgetnkkte dssgnlqeee
      601 lpllvqdsvv lllpykedip gtlsvrenea sssnaglgqe evefdgfgdm fnepeiaegp
      661 iigpslanev aetgfmagsi sdsdpdevdd snspvsvesc lshfikpell sddnawncen
      721 cakilrhqkl kakkkqtkmg kdllngsetr sldmehqcpn gvrtisngdi ssssdssvfh
      781 nknqngvkve ngqtseldsv eledasplks nssvsskcya qekcggtrti dscnvenpsg
      841 netfrqsnsh mtencqsgvi ddeeldsenl kvkrnatkrv linkappvlt ihlkrfcqda
      901 rgrlsklngh vnfretidlr pyldprceda dncnyslvgv vehsgtmrgg hyiayvrgge
      961 krkgttgidh vgsqwyyvsd qhvrqasiee vlrceayilf yekv
//
LOCUS       XP_040944588             388 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944588
VERSION     XP_040944588.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088654.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..388
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43909
     Region          163..257
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     CDS             1..388
                     /gene="LOC121214681"
                     /coded_by="XM_041088654.1:65..1231"
                     /db_xref="GeneID:121214681"
ORIGIN      
        1 mskevegmet rgrarkasrs rdilsaledr vvtlessmgd ikervedvdd rlhdglqsmq
       61 eqlkeyvtdn mkqltgrdda ieamvvalkg eiaelkgelt iykvalgngg laaaapkpni
      121 dvpkpkefkg trsardvdnf lwgieqyfca kgitedvtkv ttaamylsdv allwwrrrst
      181 dvrrggseie tweefrcefk aqfypeyaed eararlrrla qqgtvreyvq efselmlqis
      241 dmgekeaffs fmdglkpwak qelqrrgvqe ltkamsvaes laefggrkdn snsskprlkg
      301 nsggdkerpt rngdgkkpwd krksrpircf hcegphmikd cpkkvalkam eakgdfliak
      361 qvgnllrhcg sskgrltssi rrmrrgrr
//
LOCUS       XP_016691131             616 aa            linear   PLN 06-AUG-2024
DEFINITION  sucrose transport protein SUC3 [Gossypium hirsutum].
ACCESSION   XP_016691131
VERSION     XP_016691131.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835642.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691131.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="sucrose transport protein SUC3"
                     /calculated_mol_wt=65609
     Region          72..602
                     /region_name="GPH_sucrose"
                     /note="GPH family sucrose/H+ symporter; TIGR01301"
                     /db_xref="CDD:273545"
     CDS             1..616
                     /gene="LOC107908466"
                     /coded_by="XM_016835642.2:137..1987"
                     /db_xref="GeneID:107908466"
ORIGIN      
        1 magmsdsvpi rfpyrnlnke levemtddph fridlnsspn spsasssspa srvpngnanl
       61 sspihagskd cslitlvlsc tvaagvqfgw alqlslltpy iqtlgiehaf ssfiwlcgpi
      121 tglvvqpcvg iwsdkctsky grrrpfilag almislavii igfsadigyl lgdtkeqcst
      181 fkgtrtraaf vfvigfwmld lanntvqgpa ralladlsgp dqhnssnaif cswmavgnil
      241 gfsagasgsw hrwfpflenr acceacanlk aaflvavvfl lfcavvtvcf akevplplpa
      301 dqptrlsdsa plldgstqkg fqhskskada sivpndnrni aengyewvsn sklanskdnn
      361 sqnevfsdgp gavlvnllms lrhlppamhs vlivmalswl swfpfflfdt dwmgrevyhg
      421 dpkgnasetk lydqgvrega fglllnsvvl gissffiepm cqrigprlvw amsnytvfac
      481 mgvtaiislv svteysegie hvfggggaik iaalvvfall gfplaitysv pfsvtaelta
      541 dsgggqglai gvlnlaivip qmivslgagp wdalfgggni pafilasfca laagiiatlr
      601 lpdlassfks sgfhfg
//
LOCUS       XP_016691128             244 aa            linear   PLN 06-AUG-2024
DEFINITION  binding partner of ACD11 1 [Gossypium hirsutum].
ACCESSION   XP_016691128
VERSION     XP_016691128.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835639.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..244
                     /product="binding partner of ACD11 1"
                     /calculated_mol_wt=26154
     Region          1..244
                     /region_name="PLN03121"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215589"
     CDS             1..244
                     /gene="LOC107908465"
                     /coded_by="XM_016835639.2:198..932"
                     /db_xref="GeneID:107908465"
ORIGIN      
        1 mndfgytvev tglptkatek dvydffafsg tiehveivrs geyastayvt fknaysqeta
       61 vllsgatild qriyisrwgq yeeefdfwsp srsqedetss rqpplrsqfv shageavsfa
      121 qdvvkamlgk gyvlgkdals kaktldeshq vsataaakva elserigltd kicvgvdavr
      181 svderyhvse ntksaisaag rtaaaaanav vsssyfskga lwvsgaldra akaaadignr
      241 gvhq
//
LOCUS       XP_016691129             244 aa            linear   PLN 06-AUG-2024
DEFINITION  binding partner of ACD11 1 [Gossypium hirsutum].
ACCESSION   XP_016691129
VERSION     XP_016691129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835640.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..244
                     /product="binding partner of ACD11 1"
                     /calculated_mol_wt=26154
     Region          1..244
                     /region_name="PLN03121"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215589"
     CDS             1..244
                     /gene="LOC107908465"
                     /coded_by="XM_016835640.2:173..907"
                     /db_xref="GeneID:107908465"
ORIGIN      
        1 mndfgytvev tglptkatek dvydffafsg tiehveivrs geyastayvt fknaysqeta
       61 vllsgatild qriyisrwgq yeeefdfwsp srsqedetss rqpplrsqfv shageavsfa
      121 qdvvkamlgk gyvlgkdals kaktldeshq vsataaakva elserigltd kicvgvdavr
      181 svderyhvse ntksaisaag rtaaaaanav vsssyfskga lwvsgaldra akaaadignr
      241 gvhq
//
LOCUS       XP_016691130             244 aa            linear   PLN 06-AUG-2024
DEFINITION  binding partner of ACD11 1 [Gossypium hirsutum].
ACCESSION   XP_016691130
VERSION     XP_016691130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835641.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..244
                     /product="binding partner of ACD11 1"
                     /calculated_mol_wt=26154
     Region          1..244
                     /region_name="PLN03121"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215589"
     CDS             1..244
                     /gene="LOC107908465"
                     /coded_by="XM_016835641.2:164..898"
                     /db_xref="GeneID:107908465"
ORIGIN      
        1 mndfgytvev tglptkatek dvydffafsg tiehveivrs geyastayvt fknaysqeta
       61 vllsgatild qriyisrwgq yeeefdfwsp srsqedetss rqpplrsqfv shageavsfa
      121 qdvvkamlgk gyvlgkdals kaktldeshq vsataaakva elserigltd kicvgvdavr
      181 svderyhvse ntksaisaag rtaaaaanav vsssyfskga lwvsgaldra akaaadignr
      241 gvhq
//
LOCUS       XP_040944589             244 aa            linear   PLN 06-AUG-2024
DEFINITION  binding partner of ACD11 1 [Gossypium hirsutum].
ACCESSION   XP_040944589
VERSION     XP_040944589.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088655.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..244
                     /product="binding partner of ACD11 1"
                     /calculated_mol_wt=26154
     Region          1..244
                     /region_name="PLN03121"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215589"
     CDS             1..244
                     /gene="LOC107908465"
                     /coded_by="XM_041088655.1:124..858"
                     /db_xref="GeneID:107908465"
ORIGIN      
        1 mndfgytvev tglptkatek dvydffafsg tiehveivrs geyastayvt fknaysqeta
       61 vllsgatild qriyisrwgq yeeefdfwsp srsqedetss rqpplrsqfv shageavsfa
      121 qdvvkamlgk gyvlgkdals kaktldeshq vsataaakva elserigltd kicvgvdavr
      181 svderyhvse ntksaisaag rtaaaaanav vsssyfskga lwvsgaldra akaaadignr
      241 gvhq
//
LOCUS       XP_016691126              93 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor PRE6 [Gossypium hirsutum].
ACCESSION   XP_016691126
VERSION     XP_016691126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835637.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..93
                     /product="transcription factor PRE6"
                     /calculated_mol_wt=10517
     Region          16..93
                     /region_name="PLN03217"
                     /note="transcription factor ATBS1; Provisional"
                     /db_xref="CDD:178756"
     CDS             1..93
                     /gene="LOC107908464"
                     /coded_by="XM_016835637.2:408..689"
                     /db_xref="GeneID:107908464"
ORIGIN      
        1 msgrrsrskq ssvssitddq itdlvsklqh lipelrrrrf dkvstskvlq etcnyirslh
       61 revedlsdrl sqllastdsd sdqaaiirsl lmq
//
LOCUS       XP_016691125             251 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-prolyl cis-trans isomerase CYP23 [Gossypium hirsutum].
ACCESSION   XP_016691125
VERSION     XP_016691125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835636.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..251
                     /product="peptidyl-prolyl cis-trans isomerase CYP23"
                     /calculated_mol_wt=28554
     Region          57..213
                     /region_name="PpiB"
                     /note="Peptidyl-prolyl cis-trans isomerase (rotamase) -
                     cyclophilin family [Posttranslational modification,
                     protein turnover, chaperones]; COG0652"
                     /db_xref="CDD:440417"
     CDS             1..251
                     /gene="LOC107908463"
                     /coded_by="XM_016835636.2:232..987"
                     /db_xref="GeneID:107908463"
ORIGIN      
        1 mkvweltnas ldqaprrlkr esktrrkeem kilwwvslvf vitnvgalae epqlssprvv
       61 fqtnygdief gfypsvapkt vdhifklvrl gcyntnhffr vdrgfvaqva dvasgrsapm
      121 neeqrkeaek tivgefsdvk hvrgilsmgr ysdpdsaqss fsillgdaph ldgqyaifgk
      181 vtkgdetlrk leelpthreg ifvmpverit ilssyyydte lesckqergi lkqrlaasav
      241 eierqrmkcf p
//
LOCUS       XP_040944591             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944591
VERSION     XP_040944591.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088657.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15021
     CDS             1..132
                     /gene="LOC107907641"
                     /coded_by="XM_041088657.1:615..1013"
                     /db_xref="GeneID:107907641"
ORIGIN      
        1 mkmitcdrat ddvaamahkk yepflnksid hydemalvvg kdmgtesfsr tfadidlddg
       61 nqdsvpvgcd neeaeetpql yeqvmsmeee gfdddflcsv fdylvshefe akvflvkskk
      121 hkqiwlqkfs qg
//
LOCUS       XP_040944592             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944592
VERSION     XP_040944592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088658.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15021
     CDS             1..132
                     /gene="LOC107907641"
                     /coded_by="XM_041088658.1:2109..2507"
                     /db_xref="GeneID:107907641"
ORIGIN      
        1 mkmitcdrat ddvaamahkk yepflnksid hydemalvvg kdmgtesfsr tfadidlddg
       61 nqdsvpvgcd neeaeetpql yeqvmsmeee gfdddflcsv fdylvshefe akvflvkskk
      121 hkqiwlqkfs qg
//
LOCUS       XP_040944593             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944593
VERSION     XP_040944593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088659.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15021
     CDS             1..132
                     /gene="LOC107907641"
                     /coded_by="XM_041088659.1:659..1057"
                     /db_xref="GeneID:107907641"
ORIGIN      
        1 mkmitcdrat ddvaamahkk yepflnksid hydemalvvg kdmgtesfsr tfadidlddg
       61 nqdsvpvgcd neeaeetpql yeqvmsmeee gfdddflcsv fdylvshefe akvflvkskk
      121 hkqiwlqkfs qg
//
LOCUS       XP_040944594             132 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944594
VERSION     XP_040944594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088660.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15021
     CDS             1..132
                     /gene="LOC107907641"
                     /coded_by="XM_041088660.1:1338..1736"
                     /db_xref="GeneID:107907641"
ORIGIN      
        1 mkmitcdrat ddvaamahkk yepflnksid hydemalvvg kdmgtesfsr tfadidlddg
       61 nqdsvpvgcd neeaeetpql yeqvmsmeee gfdddflcsv fdylvshefe akvflvkskk
      121 hkqiwlqkfs qg
//
LOCUS       XP_016691119            1012 aa            linear   PLN 06-AUG-2024
DEFINITION  PH, RCC1 and FYVE domains-containing protein 1 [Gossypium
            hirsutum].
ACCESSION   XP_016691119
VERSION     XP_016691119.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691119.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1012
                     /product="PH, RCC1 and FYVE domains-containing protein 1"
                     /calculated_mol_wt=110192
     Region          13..122
                     /region_name="PH_PLC_plant-like"
                     /note="Plant-like Phospholipase C (PLC) pleckstrin
                     homology (PH) domain; cd13365"
                     /db_xref="CDD:270171"
     Site            order(26,28,38,55,105)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270171"
     Site            order(29,31,35,37,39,54..55)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270171"
     Region          291..627
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          634..701
                     /region_name="FYVE"
                     /note="FYVE zinc finger; pfam01363"
                     /db_xref="CDD:426221"
     Region          828..>895
                     /region_name="Tropomyosin_1"
                     /note="Tropomyosin like; pfam12718"
                     /db_xref="CDD:403808"
     Region          870..>898
                     /region_name="BRX_N"
                     /note="Transcription factor BRX N-terminal domain;
                     pfam13713"
                     /db_xref="CDD:404581"
     Region          951..1006
                     /region_name="BRX"
                     /note="Transcription factor regulating root and shoot
                     growth via Pin3; pfam08381"
                     /db_xref="CDD:429960"
     CDS             1..1012
                     /gene="LOC107908458"
                     /coded_by="XM_016835630.2:583..3621"
                     /db_xref="GeneID:107908458"
ORIGIN      
        1 madfqkngla ekdidqaitt lkkgasllky grrgkpkfcp fqlsndeskl iwysrkkakh
       61 iklsevskii pgqrtaifqr yprpekeyqs fslicndrsl dlickdkdea evwliglkal
      121 isrgtyhkrr tevngnasvd ssqpcdqkas pnspldpeda qgiqapyeah nrlgkafadi
      181 ithtslvksv sepdlvgfgl vsagsvdnsn srssggdair islssavsss shgssredfd
      241 algdvfiwgq gigdgvlggg tdkvddsfnt kldallpkel vttvvldvnn iacgdrhavl
      301 vtkqgeifsw geesggrlgh gveadvpkpk hidtlngtkf esvacgeyhs cavtvsgdlf
      361 twgdgthnsg llghgtevsh wipkrvsnme gkhvlyvscg pchtalvtcg sqlftfgdgs
      421 fgalghgdhs ssniprevet lselhttrva cgawhtaavv kimsesydsg spsssssakl
      481 ytwgdgdkgq lghgdnkprl fpecvaahfd ekicqvacgy nltvalttsg rvytmgssay
      541 gqlgsatadg kvptrvegki adnfveeiac gsyhiailts ktkvytwgkg sngqlghgdi
      601 ndrntptlve flkdklvksv vcgsnftaii slhkwvsvad hsicsgcrnp fgfrrkrhnc
      661 yncglifcka cstrkslkts mapttnkpyr vcdecfvklr ksaksvsvvw tskakngilp
      721 cksmdrelcr lsldssyqae srnfkhelkl esqarplfpv qngnfhlggf fspkmsicpv
      781 rdskkilpas issskktsra tspasgklgp nrssevtfdd skkmndslnr eiinlraqvk
      841 dlsskskhle aelektsnrl keitavaene akkcksatev irsltaqlke vtdklpagks
      901 alhnsssiat ntqrmhsdns hatsirlprs evscnldnis mshgtkgqte ksetiiqdep
      961 gvyltlsplp ngnhelkrvr fsrkhfteeq aenwwaehgd kvcerhnirn tc
//
LOCUS       XP_016691116             162 aa            linear   PLN 06-AUG-2024
DEFINITION  dihydroxy-acid dehydratase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016691116
VERSION     XP_016691116.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835627.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..162
                     /product="dihydroxy-acid dehydratase, chloroplastic"
                     /calculated_mol_wt=18003
     Region          1..>105
                     /region_name="PRK00911"
                     /note="dihydroxy-acid dehydratase; Provisional; cl00340"
                     /db_xref="CDD:469730"
     Region          <106..>155
                     /region_name="NatA_aux_su"
                     /note="N-terminal acetyltransferase A, auxiliary subunit;
                     pfam12569"
                     /db_xref="CDD:463630"
     CDS             1..162
                     /gene="LOC107908457"
                     /coded_by="XM_016835627.2:275..763"
                     /db_xref="GeneID:107908457"
ORIGIN      
        1 mlygvglsed dmlkpqvgis svwyegnlcn mhllklsnev krgvedagmv gfrfntvgvs
       61 daismgtrgm sfswqsrdli adsietimgv qwydgnisip gcdknripld flqgdkfrea
      121 avsyikpllt kgvpslfsdl splydhpgka dmlkrrdhlq wq
//
LOCUS       XP_016691115             282 aa            linear   PLN 06-AUG-2024
DEFINITION  sphinganine C4-monooxygenase 1 [Gossypium hirsutum].
ACCESSION   XP_016691115
VERSION     XP_016691115.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835626.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..282
                     /product="sphinganine C4-monooxygenase 1"
                     /calculated_mol_wt=32131
     Region          123..259
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; pfam04116"
                     /db_xref="CDD:397991"
     CDS             1..282
                     /gene="LOC107908455"
                     /coded_by="XM_016835626.2:171..1019"
                     /db_xref="GeneID:107908455"
ORIGIN      
        1 msgsskainf lavssssssh lcstkmalai sdellatfvp ivvywiysaf ymsfgsfdny
       61 rlhskkdeee knlvskanvi knvlfqqtiq stlaivlyrv ignegggask sqpnsitvma
      121 gqfitamfvl dtwqyfmhry fhhkkflyrh fhshhhklvv pyafgaiynh pleafvfdii
      181 ggalsysisg msprtsmyff sfatiksvdd hcgvwlpgnl fhiffnnnsa yhdvhhylyg
      241 gkynfsqpff vmwdrimgty mpyslekrae ggfearpikr ak
//
LOCUS       XP_016691114             260 aa            linear   PLN 06-AUG-2024
DEFINITION  sphinganine C4-monooxygenase 1 [Gossypium hirsutum].
ACCESSION   XP_016691114
VERSION     XP_016691114.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835625.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..260
                     /product="sphinganine C4-monooxygenase 1"
                     /calculated_mol_wt=30072
     Region          100..236
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; pfam04116"
                     /db_xref="CDD:397991"
     CDS             1..260
                     /gene="LOC107908454"
                     /coded_by="XM_016835625.2:78..860"
                     /db_xref="GeneID:107908454"
ORIGIN      
        1 mafeitneml vgslmpvivy wvygglytil gyscnnyrlh pkededeknf askktvikgv
       61 lgqqfrqfia tnllymitrg ndpgassgqs tsffviarqf ivamfvfdty qyflhrylhq
      121 nkflykhlhs khhrlvvsyp fgaiyshpie gllfdiiggt maiyisgmsp ltsaffssfc
      181 nmksvddhcg lmlpwnpfhi fftnntayhd lhhqlyggky nfsqpffsiw dkilgtympy
      241 slekreeggf klrplkefkn
//
LOCUS       XP_016691113             259 aa            linear   PLN 06-AUG-2024
DEFINITION  sphinganine C4-monooxygenase 2 [Gossypium hirsutum].
ACCESSION   XP_016691113
VERSION     XP_016691113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835624.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..259
                     /product="sphinganine C4-monooxygenase 2"
                     /calculated_mol_wt=30081
     Region          99..233
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; pfam04116"
                     /db_xref="CDD:397991"
     CDS             1..259
                     /gene="LOC107908453"
                     /coded_by="XM_016835624.2:2159..2938"
                     /db_xref="GeneID:107908453"
ORIGIN      
        1 mafvtseell atlvpiavyw iysgmyvmfe srfekyklhs kkeeeeknlv srkevfkavl
       61 chqvmsiain lftyavtrek dgeaspkksl tllllakqlv iamvvidtws ffvhwylhqn
      121 kflykhlhvp hhrlvvpysf ggqymhpieg fldtmggtla vllsgmspri amffssftil
      181 klvddhcgmk lpgnpfylff nnnsayhdvh hqlygtkynf svyfdiwdri lgtympysle
      241 krpdgglevr radqehkkd
//
LOCUS       XP_016741827             184 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH162 [Gossypium hirsutum].
ACCESSION   XP_016741827
VERSION     XP_016741827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="transcription factor bHLH162"
                     /calculated_mol_wt=20561
     Region          12..89
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(20..21,23,28,51..52)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(26..27,30..31,33..34,38,52..53,56..57,60,62..63,
                     66..67)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..184
                     /gene="LOC107951333"
                     /coded_by="XM_016886338.2:184..738"
                     /db_xref="GeneID:107951333"
ORIGIN      
        1 mkknscggqs nskpdrkaie kkrrndmkil csklasliph hnfkpskeia sqqdqldlaa
       61 vyikhlreri eklkrlkeea mrsmeasssm mertasvglt spvlelrdlg ssielvlitg
      121 lnknfmlyev isifeqegae vvsasfstvg gkifhtlhaq aklsrvgvet trvcqrlqel
      181 iksy
//
LOCUS       XP_016741828             184 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH162 [Gossypium hirsutum].
ACCESSION   XP_016741828
VERSION     XP_016741828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886339.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..184
                     /product="transcription factor bHLH162"
                     /calculated_mol_wt=20561
     Region          12..89
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(20..21,23,28,51..52)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(26..27,30..31,33..34,38,52..53,56..57,60,62..63,
                     66..67)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..184
                     /gene="LOC107951333"
                     /coded_by="XM_016886339.2:188..742"
                     /db_xref="GeneID:107951333"
ORIGIN      
        1 mkknscggqs nskpdrkaie kkrrndmkil csklasliph hnfkpskeia sqqdqldlaa
       61 vyikhlreri eklkrlkeea mrsmeasssm mertasvglt spvlelrdlg ssielvlitg
      121 lnknfmlyev isifeqegae vvsasfstvg gkifhtlhaq aklsrvgvet trvcqrlqel
      181 iksy
//
LOCUS       XP_016693129             522 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH111 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693129
VERSION     XP_016693129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837640.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..522
                     /product="transcription factor bHLH111 isoform X1"
                     /calculated_mol_wt=57147
     Region          415..457
                     /region_name="bHLH_AtbHLH_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana genes coding transcription factors
                     and similar proteins; cd11393"
                     /db_xref="CDD:381399"
     Site            order(415..416,419,422..423,426,435..436,439..440,443,446,
                     449..450,453,456..457)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381399"
     CDS             1..522
                     /gene="LOC107909931"
                     /coded_by="XM_016837640.2:90..1658"
                     /db_xref="GeneID:107909931"
ORIGIN      
        1 maeectstsp tlhnwwdlhh asslsswttn psswhhhqnp nsntrncdqd dvlsistslt
       61 nasihsvlts vdelsgggsg ttrqlveqpt vdpdpsneli ngehgsdnhl wshvlsnvgs
      121 ngadignnll eaissksnss aagifepacd ylkkidgnwe fsnssvfnnf iknmnegfds
      181 sstdnnqqss seserltkls nmvshwsiap pdpqvnppqf inpksssqdp tslqppaafc
      241 gmatvknpif lscygngnhh hdvkmetqtl dmeapssyfr rafkagnnsn gyhihnspin
      301 ssisteadnf ygsmshfpct snitycrlsk plidihassk psfisplnls dckkqglqaa
      361 nslqtrtrng rtqgianegk kkrgeetsds ttvlkkpkle nsasssvkmh apkvklgdri
      421 talqqivspf gktdtasvll eaigyinflq eqvqllsnpy mkpnshkdpw gsldikeqkg
      481 dikvdlrsrg lclvpisctp kvyhentasd ywsptyrgcl yr
//
LOCUS       XP_016693130             447 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH111 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693130
VERSION     XP_016693130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837641.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..447
                     /product="transcription factor bHLH111 isoform X2"
                     /calculated_mol_wt=48696
     CDS             1..447
                     /gene="LOC107909931"
                     /coded_by="XM_016837641.2:91..1434"
                     /db_xref="GeneID:107909931"
ORIGIN      
        1 maeectstsp tlhnwwdlhh asslsswttn psswhhhqnp nsntrncdqd dvlsistslt
       61 nasihsvlts vdelsgggsg ttrqlveqpt vdpdpsneli ngehgsdnhl wshvlsnvgs
      121 ngadignnll eaissksnss aagifepacd ylkkidgnwe fsnssvfnnf iknmnegfds
      181 sstdnnqqss seserltkls nmvshwsiap pdpqvnppqf inpksssqdp tslqppaafc
      241 gmatvknpif lscygngnhh hdvkmetqtl dmeapssyfr rafkagnnsn gyhihnspin
      301 ssisteadnf ygsmshfpct snitycrlsk plidihassk psfisplnls dckkqglqaa
      361 nslqtrtrng rtqgianegk kkrgeetsds ttvlkkpkle nsasssvkmh apkvklgdri
      421 talqqivspf gkkqldtstf yknkcsy
//
LOCUS       XP_016693131             446 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor bHLH111 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693131
VERSION     XP_016693131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837642.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..446
                     /product="transcription factor bHLH111 isoform X3"
                     /calculated_mol_wt=48568
     CDS             1..446
                     /gene="LOC107909931"
                     /coded_by="XM_016837642.2:91..1431"
                     /db_xref="GeneID:107909931"
ORIGIN      
        1 maeectstsp tlhnwwdlhh asslsswttn psswhhhqnp nsntrncdqd dvlsistslt
       61 nasihsvlts vdelsgggsg ttrqlveqpt vdpdpsneli ngehgsdnhl wshvlsnvgs
      121 ngadignnll eaissksnss aagifepacd ylkkidgnwe fsnssvfnnf iknmnegfds
      181 sstdnnqqss seserltkls nmvshwsiap pdpqvnppqf inpksssqdp tslqppaafc
      241 gmatvknpif lscygngnhh hdvkmetqtl dmeapssyfr rafkagnnsn gyhihnspin
      301 ssisteadnf ygsmshfpct snitycrlsk plidihassk psfisplnls dckkqglqaa
      361 nslqtrtrng rtqgianegk kkrgeetsds ttvlkkpkle nsasssvkmh apkvklgdri
      421 talqqivspf gkqldtstfy knkcsy
//
LOCUS       XP_016694093             396 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694093
VERSION     XP_016694093.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838604.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45308
     Region          86..291
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(137,139,141,151..153,155..156,171,183,185,187,189,
                     201,203,205,215,217,236..237,239,241,252,254,256,258,
                     269..273,275..276,279..281,284)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176879"
     CDS             1..396
                     /gene="LOC107910666"
                     /coded_by="XM_016838604.2:158..1348"
                     /db_xref="GeneID:107910666"
ORIGIN      
        1 mgvnlwgceg gkmgdvssme mwwlinirat liallfisif hfskkfyvkf ltiwtsppss
       61 llsstlhlps asspisnqds qsrtlevvsd sdlkflidnl dekrnedenw envidkknnf
      121 lsykakccks kdrplkylst avfescspel lrdfymdndy rkqwdktild hvqlqvytts
      181 gveigrtlkk fplltpreyi lawrlwegkd ttlycfikdc ehpsaprqkk yvrveyfrsg
      241 wqirkvpgrd aseirmfhqe daglnvemak lafakgawsf lckmdnalrn yssinhppst
      301 psvwaatliq kvppdldyrt ditsavptsv ayndesrkkk llrrpskkfl akallllggv
      361 iylcrahsal gtkvtmacil tklrkrdgss rqsshs
//
LOCUS       XP_040944595             396 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944595
VERSION     XP_040944595.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088661.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45308
     Region          86..291
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(137,139,141,151..153,155..156,171,183,185,187,189,
                     201,203,205,215,217,236..237,239,241,252,254,256,258,
                     269..273,275..276,279..281,284)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176879"
     CDS             1..396
                     /gene="LOC107910666"
                     /coded_by="XM_041088661.1:158..1348"
                     /db_xref="GeneID:107910666"
ORIGIN      
        1 mgvnlwgceg gkmgdvssme mwwlinirat liallfisif hfskkfyvkf ltiwtsppss
       61 llsstlhlps asspisnqds qsrtlevvsd sdlkflidnl dekrnedenw envidkknnf
      121 lsykakccks kdrplkylst avfescspel lrdfymdndy rkqwdktild hvqlqvytts
      181 gveigrtlkk fplltpreyi lawrlwegkd ttlycfikdc ehpsaprqkk yvrveyfrsg
      241 wqirkvpgrd aseirmfhqe daglnvemak lafakgawsf lckmdnalrn yssinhppst
      301 psvwaatliq kvppdldyrt ditsavptsv ayndesrkkk llrrpskkfl akallllggv
      361 iylcrahsal gtkvtmacil tklrkrdgss rqsshs
//
LOCUS       XP_016694091             504 aa            linear   PLN 06-AUG-2024
DEFINITION  protein root UVB sensitive 6 [Gossypium hirsutum].
ACCESSION   XP_016694091
VERSION     XP_016694091.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838602.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694091.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..504
                     /product="protein root UVB sensitive 6"
                     /calculated_mol_wt=55313
     Region          116..348
                     /region_name="UVB_sens_prot"
                     /note="Vitamin B6 photo-protection and homoeostasis;
                     pfam04884"
                     /db_xref="CDD:428173"
     CDS             1..504
                     /gene="LOC107910665"
                     /coded_by="XM_016838602.2:222..1736"
                     /db_xref="GeneID:107910665"
ORIGIN      
        1 mkqspnstst saaqtltsqe srllvretlr isaslasnag lssstgiheg aaiplmdenr
       61 rmglvgdefr dsslklicce eidgrrwkyv aekdsfgnfk nnsirtvslh tpqapldelm
      121 sfvrsyvvpe gfpesvtpsy vpymtwralk hffggamgvf ttqtllnsvg isrnsatpga
      181 vainwilkdg agrvgkmlfs rqgnkfdydl kqlrfagdll melgagvela tasvphlflp
      241 lacaanvlkn vaavtststr tpiykafakg enigdvtakg ecvgniadll gtglsilisk
      301 knpslvttfs llscgyvfss yrevrsvvlh tlnrarfsva vesflktgqv pslqegnmqe
      361 kifsfpwlkd rpvilgsrfr dafqdpgafl aieplfeker yivtynpskg kvyallkdqa
      421 ksddilkaaf hahvllhfih sadnslssrs qhehlmpaat dfelhiaesc kmvstsyrhf
      481 knnaaeqgwr msdsllnpgr arlh
//
LOCUS       XP_016694089             350 aa            linear   PLN 06-AUG-2024
DEFINITION  probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016694089
VERSION     XP_016694089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838600.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="probable 3-hydroxyisobutyrate dehydrogenase,
                     mitochondrial"
                     /calculated_mol_wt=37040
     Region          44..342
                     /region_name="garR"
                     /note="tartronate semialdehyde reductase; Provisional;
                     cl42929"
                     /db_xref="CDD:456274"
     CDS             1..350
                     /gene="LOC107910663"
                     /coded_by="XM_016838600.2:171..1223"
                     /db_xref="GeneID:107910663"
ORIGIN      
        1 mammkmkiyg yrlrallsts lssspfhsvp srtfssssfe nvgfiglgnm gsrmannllk
       61 agykmtvhdv ncnvmkkysd mgvstkqtps evaeasdvvi tmlpssshvl nvyngpdgll
      121 qggdlltpql fidsstidpq tsrklavsvs ncilkekkdn wenpvmldap vsggvvaaea
      181 gsltfmvggs edvylaaksl llsmgknaif cggpgngsva kicnnlamai smlglseala
      241 lgqslgitas tltkifnsss arcwssdsyn pvpgvmqgvp ssrnysggfa sklmakdlnl
      301 aaasaeevgq rcpltflaqd iyteicndgh etedfscvfq hyysgkgern
//
LOCUS       XP_040944596             767 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944596
VERSION     XP_040944596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088662.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..767
                     /product="zinc finger CCCH domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=89634
     Region          252..271
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          279..377
                     /region_name="RRM_U2AFBPL"
                     /note="RNA recognition motif (RRM) found in U2 small
                     nuclear ribonucleoprotein auxiliary factor 35 kDa
                     subunit-related protein 1 (U2AFBPL) and similar proteins;
                     cd12540"
                     /db_xref="CDD:409956"
     CDS             1..767
                     /gene="LOC107910661"
                     /coded_by="XM_041088662.1:75..2378"
                     /db_xref="GeneID:107910661"
ORIGIN      
        1 maeaeaaisk qeeggqrdnh pmtkgrkekr keikkmkrkq lrkeaaeker eaeeawlndp
       61 eeqkriaree eeerkrrela lrefeerera wieamdikrk aqedeeeeek rrddsedang
      121 eqrqqedrgd dweyvedgpa eiiwqgneii vrkkkvrapk geaiqkckee vklsqslmiy
      181 ifhamfsflf latvrdlegf ctqdadrpts nplppqseaf sdylntssaq evlesvakev
      241 pnfgteqdka hcpfhlktga crfgqrcsrv hfypdksctl lmrnmyngpg laleqdegle
      301 ytdeeveqcy eefyedvhte flkfgeiinf kvckngsfhl rgnvyvhyks lesavlayds
      361 ingryfagkq vkcefvnitr wkvaicgefm ksrlktcsrg tacnfihcfw npggdyewad
      421 wdkppprswa kkmaalfgyg deaefekqie qdnsghlrnp nhlvksdddr hrsrrsrsre
      481 rgknndrkqr kdldgrcdrq etslkreqns erildtcsdg gysesdidgs rdtdkirshf
      541 hakrnskwqs dsseyladtn rvyedtecqt kkrrrhqskg eyrndhggcg vriheddgdq
      601 ldrdrdseih hsqgkssrhy iresslndwg psknkihvsd slvkqlstvs dreshhhsrq
      661 kssgnldevl gpddygnady rthesnssdh gserdkgrhh dhqskysrhl iecselldap
      721 vhqaklkdkr dlkrgrhsrh ryeeidssdd regkhhvkrr shghkrq
//
LOCUS       XP_016694088             734 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694088
VERSION     XP_016694088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838599.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..734
                     /product="zinc finger CCCH domain-containing protein 5
                     isoform X2"
                     /calculated_mol_wt=85794
     Region          219..238
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          246..344
                     /region_name="RRM_U2AFBPL"
                     /note="RNA recognition motif (RRM) found in U2 small
                     nuclear ribonucleoprotein auxiliary factor 35 kDa
                     subunit-related protein 1 (U2AFBPL) and similar proteins;
                     cd12540"
                     /db_xref="CDD:409956"
     CDS             1..734
                     /gene="LOC107910661"
                     /coded_by="XM_016838599.2:129..2333"
                     /db_xref="GeneID:107910661"
ORIGIN      
        1 maeaeaaisk qeeggqrdnh pmtkgrkekr keikkmkrkq lrkeaaeker eaeeawlndp
       61 eeqkriaree eeerkrrela lrefeerera wieamdikrk aqedeeeeek rrddsedang
      121 eqrqqedrgd dweyvedgpa eiiwqgneii vrkkkvrapk geaiqkckee dadrptsnpl
      181 ppqseafsdy lntssaqevl esvakevpnf gteqdkahcp fhlktgacrf gqrcsrvhfy
      241 pdksctllmr nmyngpglal eqdegleytd eeveqcyeef yedvhteflk fgeiinfkvc
      301 kngsfhlrgn vyvhyksles avlaydsing ryfagkqvkc efvnitrwkv aicgefmksr
      361 lktcsrgtac nfihcfwnpg gdyewadwdk ppprswakkm aalfgygdea efekqieqdn
      421 sghlrnpnhl vksdddrhrs rrsrsrergk nndrkqrkdl dgrcdrqets lkreqnseri
      481 ldtcsdggys esdidgsrdt dkirshfhak rnskwqsdss eyladtnrvy edtecqtkkr
      541 rrhqskgeyr ndhggcgvri heddgdqldr drdseihhsq gkssrhyire sslndwgpsk
      601 nkihvsdslv kqlstvsdre shhhsrqkss gnldevlgpd dygnadyrth esnssdhgse
      661 rdkgrhhdhq skysrhliec selldapvhq aklkdkrdlk rgrhsrhrye eidssddreg
      721 khhvkrrshg hkrq
//
LOCUS       XP_016694087             462 aa            linear   PLN 06-AUG-2024
DEFINITION  lysophospholipid acyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016694087
VERSION     XP_016694087.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838598.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694087.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="lysophospholipid acyltransferase 1"
                     /calculated_mol_wt=51854
     Region          1..462
                     /region_name="PLN02332"
                     /note="membrane bound O-acyl transferase (MBOAT) family
                     protein"
                     /db_xref="CDD:215190"
     CDS             1..462
                     /gene="LOC107910660"
                     /coded_by="XM_016838598.2:127..1515"
                     /db_xref="GeneID:107910660"
ORIGIN      
        1 melgletmaa aigvsvpvlr fllcfvatip vsflwrfvpg tlpkhvysaf sgvvlsylsf
       61 gissnllflv pmllgyaaml lyrpkcgiit fflsfgylig chvyymsgda wkeggidatg
      121 almvltlkvi ssainyndgl lkeedlreaq kryrlvklps lieyfgyclc cgshfagpvf
      181 emkdylewte gkgiwapsdk glspspygat fralvqagis mavylylvpy hplsrfsepv
      241 yqewgfwrkl sfqymsgfta rwkyyfiwsi seasiiisgl gfsgwtessp pkpkwdrakn
      301 vdipgvelak savvlplvwn iqvstwlrhy vyerlitkgk kpgffqllat qtvsavwhgl
      361 ypgymlffvq salmiagsrv fyrweqatnm glvkkalvfi nfaytlliln ysavgflvls
      421 lheslalygs vyyvgtilpi tlillgyiip akparskark qq
//
LOCUS       XP_016694086              80 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016694086
VERSION     XP_016694086.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838597.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..80
                     /product="pentatricopeptide repeat-containing protein
                     At4g14190, chloroplastic"
                     /calculated_mol_wt=8998
     CDS             1..80
                     /gene="LOC107910659"
                     /coded_by="XM_016838597.2:413..655"
                     /db_xref="GeneID:107910659"
ORIGIN      
        1 msilfslitv naaaaagwll thttllvety hqhrrlrali eklvkegscp mqilgddgdw
       61 tkndfwaavk ffrffvcgrt
//
LOCUS       XP_016694084             251 aa            linear   PLN 06-AUG-2024
DEFINITION  PHD finger protein ALFIN-LIKE 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694084
VERSION     XP_016694084.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838595.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..251
                     /product="PHD finger protein ALFIN-LIKE 7 isoform X1"
                     /calculated_mol_wt=28201
     Region          12..139
                     /region_name="Alfin"
                     /note="pfam12165"
                     /db_xref="CDD:463480"
     Region          198..247
                     /region_name="PHD_AL_plant"
                     /note="PHD finger found in plant Alfin1-like (AL)
                     proteins; cd15613"
                     /db_xref="CDD:277085"
     Site            order(210..215,218,220,223)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277085"
     CDS             1..251
                     /gene="LOC107910658"
                     /coded_by="XM_016838595.2:430..1185"
                     /db_xref="GeneID:107910658"
ORIGIN      
        1 megvphpipr tveevfndfr grrsglikal ttdvdkfyqq cdpekenlcl yglpnetwev
       61 nlpveevppe lpepalgvnf ardgmqekdw lslvavhsds wllavafyfg arfsfgkner
      121 krlfrminel ptifevvtgn vkqpteqyan hnssgkskss akvsrqsese skvvkmsask
      181 dedesgedee ddeqgatcga cgdsygtdef wiccdicerw fhgkcvkitp akaehikqyk
      241 cpscsskrar v
//
LOCUS       XP_016694085             250 aa            linear   PLN 06-AUG-2024
DEFINITION  PHD finger protein ALFIN-LIKE 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694085
VERSION     XP_016694085.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838596.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..250
                     /product="PHD finger protein ALFIN-LIKE 7 isoform X2"
                     /calculated_mol_wt=28102
     Region          12..139
                     /region_name="Alfin"
                     /note="pfam12165"
                     /db_xref="CDD:463480"
     Region          197..246
                     /region_name="PHD_AL_plant"
                     /note="PHD finger found in plant Alfin1-like (AL)
                     proteins; cd15613"
                     /db_xref="CDD:277085"
     Site            order(209..214,217,219,222)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277085"
     CDS             1..250
                     /gene="LOC107910658"
                     /coded_by="XM_016838596.2:356..1108"
                     /db_xref="GeneID:107910658"
ORIGIN      
        1 megvphpipr tveevfndfr grrsglikal ttdvdkfyqq cdpekenlcl yglpnetwev
       61 nlpveevppe lpepalgvnf ardgmqekdw lslvavhsds wllavafyfg arfsfgkner
      121 krlfrminel ptifevvtgn vkqpteqyan hnssgkskss aksrqseses kvvkmsaskd
      181 edesgedeed deqgatcgac gdsygtdefw iccdicerwf hgkcvkitpa kaehikqykc
      241 pscsskrarv
//
LOCUS       XP_016694080             840 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA replication licensing factor MCM2 [Gossypium hirsutum].
ACCESSION   XP_016694080
VERSION     XP_016694080.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838591.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..840
                     /product="DNA replication licensing factor MCM2"
                     /calculated_mol_wt=95566
     Region          <1..94
                     /region_name="MCM2_N"
                     /note="Mini-chromosome maintenance protein 2; pfam12619"
                     /db_xref="CDD:403724"
     Region          123..216
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          223..734
                     /region_name="MCM"
                     /note="minichromosome maintenance proteins; smart00350"
                     /db_xref="CDD:214631"
     Site            order(414,455..460,517,585,604,695..696)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350659"
     Site            order(434,439..440,453..455,471,487,492..494,497..501,
                     506..507,527,530..531,534..535,538..547,549..550,563..565,
                     595..596,598,601..602,604..605,608..609,611..615,666,668,
                     675,678,682..683,691,694..695,699,702)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350659"
     Site            order(483,488,490,542..543)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350659"
     CDS             1..840
                     /gene="LOC107910656"
                     /coded_by="XM_016838591.2:361..2883"
                     /db_xref="GeneID:107910656"
ORIGIN      
        1 mqdrraaele ldardaripn rklpqllhdq dtdddnyrps krqradlrpp saprsyddtd
       61 glqsspgrsq qdhsrddvpm tdrtddypye degddqgefe myrvqgtlre wvtrdevrrf
      121 ifkkfrdfil tyvnpknghg dieyvrline vvsankcsle idykqfisvh pniaiwlada
      181 pqsvlvvmed vaqrvvfdlh pnyknihqki yiritnlpiy dqirdirqih lntmvriggv
      241 vtrrsgvfpq lqqvkydcnk cgsilgpffq nsysevkvgs cpecqskgpf tvniertvyr
      301 nyqkltlqes pgtvpagrlp rykevillnd lidcarpgee ievtgiytnn fdmslntkng
      361 fpvfatvvea nyvakkqdlf saykltqedk edieklardp qigeriiksi apsiyghedk
      421 ktaialamfg gqeknvegkh rlrgdinvll lgdpgtaksq flkyvektgq ravyttgkga
      481 savgltaavh kdpvtrewtl eggalvladk giclidefdk mndqdrvsih eameqqsisi
      541 skagivtslq arcsviaaan piggrydssk tfsqnveltd pivsrfdilc vvkdivdpvt
      601 demlakfvvd shfrsqpkga niddkafses qeesqapvgl adskilsqel lrkyltyakl
      661 nifprfhekd makltkvyad lrkessrgqg vpiavrhies mirmseahar mhlrqhvtee
      721 dvdmairvll esfistqkfg vqkalrksfr qyitfkkdyh glllvllrel vndamrfeei
      781 lsgstqmlny vdvkvvdlqa kaeeyeitnl eaffsssefk acyeldeqrk virrhladdr
//
LOCUS       XP_016694081              82 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA replication licensing factor MCM2 [Gossypium hirsutum].
ACCESSION   XP_016694081
VERSION     XP_016694081.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838592.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..82
                     /product="DNA replication licensing factor MCM2"
                     /calculated_mol_wt=8952
     CDS             1..82
                     /gene="LOC107910657"
                     /coded_by="XM_016838592.2:77..325"
                     /db_xref="GeneID:107910657"
ORIGIN      
        1 magedsgnpv pstpesptsa gfntdqlphd nshssdeeea avdpeairde pdevdeeedd
       61 gedlyndnfm ddyremgaqd qy
//
LOCUS       XP_016694079             889 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase FERONIA isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694079
VERSION     XP_016694079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838590.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..889
                     /product="receptor-like protein kinase FERONIA isoform X1"
                     /calculated_mol_wt=96865
     Region          36..403
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          537..803
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(537..541,545,558,560,589,605..608,612,614,656,658,
                     660..661,663,674,677,695..698)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(537..541,545,558,560,589,605..608,612,656,658,
                     660..661,663,674)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(541,612,614,656,658,660,677,695..698)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(673..680,691..698)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..889
                     /gene="LOC107910653"
                     /coded_by="XM_016838590.2:263..2932"
                     /db_xref="GeneID:107910653"
ORIGIN      
        1 mnsadefcsm ciiilvsllf qlvlaadyvp tekillncgg kseatdndnr kwtpdvgskf
       61 lvgsgnsvas qaatqdpavp evpymtarvf rsnftysfpv vpgrkflrly fyansydgqi
      121 aanalfsvtc gsytllknfs aaqtsealny afvvkeysin vdddhlnltf tpstpsnaya
      181 fvngievlsm pdiygnadgi sivgqnipft idnstaleki yrlnvggndi spsadtglfr
      241 swyddqpylf gaaygvsgaa dpnvtidygt mptyiapkdv yatarsmgpn aeinnhynlt
      301 wmfsvdsgfs ylvrlhfcef tdnitkinqr vfdvflnnqt adqgvdvial asdqvdvpvy
      361 vdyvvivpgg nsqqdlwlal hpdtsgkpqy ydailngvei fkisdpksnl agpnpvpgpk
      421 qdvvdpslal pshqgysknq kaiiaggvsg gvvlalvigf cvvaasrrrr hgkdpstsdg
      481 psgwlplsly gnshsagsak tnttgsyvss lpsnlcrhfs faeikaatnn fdealvlgvg
      541 gfgkvykgei dgaatkvaik rgnplseqgv hefqteieml sklrhrhlvs ligyceence
      601 milvydymay gtlrehlykt qkpplpwkqr leicigaarg lhylhtgakh tiihrdvktt
      661 nilldekwva kvsdfglskt gptldnthvs tvvkgsfgyl dpeyfrrqql tdksdvysfg
      721 vvlfeilcar palnptlpke qvslaewaah chkkgildqi mdpylkgkia pecfkkfaet
      781 amkcvadqgi drpsmgdvlw nlefalqlqe saeesgkgis eleveegtyd vtckgkkdpn
      841 aspgfdinva dsrssgmsms iggrslased sdgltpsavf sqimnpkgr
//
LOCUS       XP_040944597             805 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase FERONIA isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944597
VERSION     XP_040944597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088663.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..805
                     /product="receptor-like protein kinase FERONIA isoform X2"
                     /calculated_mol_wt=87917
     Region          1..319
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          453..719
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(453..457,461,474,476,505,521..524,528,530,572,574,
                     576..577,579,590,593,611..614)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(453..457,461,474,476,505,521..524,528,572,574,
                     576..577,579,590)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(457,528,530,572,574,576,593,611..614)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(589..596,607..614)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..805
                     /gene="LOC107910653"
                     /coded_by="XM_041088663.1:342..2759"
                     /db_xref="GeneID:107910653"
ORIGIN      
        1 mtarvfrsnf tysfpvvpgr kflrlyfyan sydgqiaana lfsvtcgsyt llknfsaaqt
       61 sealnyafvv keysinvddd hlnltftpst psnayafvng ievlsmpdiy gnadgisivg
      121 qnipftidns talekiyrln vggndispsa dtglfrswyd dqpylfgaay gvsgaadpnv
      181 tidygtmpty iapkdvyata rsmgpnaein nhynltwmfs vdsgfsylvr lhfceftdni
      241 tkinqrvfdv flnnqtadqg vdvialasdq vdvpvyvdyv vivpggnsqq dlwlalhpdt
      301 sgkpqyydai lngveifkis dpksnlagpn pvpgpkqdvv dpslalpshq gysknqkaii
      361 aggvsggvvl alvigfcvva asrrrrhgkd pstsdgpsgw lplslygnsh sagsaktntt
      421 gsyvsslpsn lcrhfsfaei kaatnnfdea lvlgvggfgk vykgeidgaa tkvaikrgnp
      481 lseqgvhefq teiemlsklr hrhlvsligy ceencemilv ydymaygtlr ehlyktqkpp
      541 lpwkqrleic igaarglhyl htgakhtiih rdvkttnill dekwvakvsd fglsktgptl
      601 dnthvstvvk gsfgyldpey frrqqltdks dvysfgvvlf eilcarpaln ptlpkeqvsl
      661 aewaahchkk gildqimdpy lkgkiapecf kkfaetamkc vadqgidrps mgdvlwnlef
      721 alqlqesaee sgkgiselev eegtydvtck gkkdpnaspg fdinvadsrs sgmsmsiggr
      781 slasedsdgl tpsavfsqim npkgr
//
LOCUS       XP_016694078             637 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At5g58300 [Gossypium hirsutum].
ACCESSION   XP_016694078
VERSION     XP_016694078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838589.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..637
                     /product="probable inactive receptor kinase At5g58300"
                     /calculated_mol_wt=69737
     Region          37..>233
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..637
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(372..376,380,392,394,423,439..442,446,448,493,495,
                     497..498,500,511,514,527..529)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(372..376,380,392,394,423,439..442,446,493,495,
                     497..498,500,511)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(376,446,448,493,495,497,514,527..529)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     CDS             1..637
                     /gene="LOC107910652"
                     /coded_by="XM_016838589.2:435..2348"
                     /db_xref="GeneID:107910652"
ORIGIN      
        1 myvsnelync fregkknhyi lgmktvemkl asyfaafacl flccssgtva dldldeqall
       61 qfsatvphgr klnwspatpv ctswvginct kdgsrvialh lpgvglhgqi pantlgklda
      121 lmvlslrsnr lsgnlpsdvl slptlryvyl qlnnfsgdip sslppsldfl dlsfnsltgn
      181 iptaiqnltn ltglnlhnns ltgpipnfsl prlrllnlsy nhlngsvpss fqkfpassfv
      241 gnhicgppfn qcltispsps psptnfpppt vpenprrdsh kklsigaiia igvtgsalvf
      301 flllilvlsc lkkkrnqgga ltskvkggrs ekpkedfgse vqeaeknklv ffegcsynfd
      361 ledllrasae vlgkgsygtt ykaileegit vvvkrlkeva agkrefeqqm givgrlgqhp
      421 nlvplrayyy skdeklmvyd fiaagsfssl lhgsrergrp lpgwdsrvki slgaakgiay
      481 ihssgggkfi hgnikssnvl ltkdlhgcis dfgltplmts pkvpsrsagy rapeviesrk
      541 ftqksdvysf gvlllemltg kaatqssghe dvvdlprwvq svvreewtae vfdvelmkyq
      601 nieeelvqml qiamtcvarl pdmrptmeev trmieei
//
LOCUS       XP_040944598             637 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At5g58300 [Gossypium hirsutum].
ACCESSION   XP_040944598
VERSION     XP_040944598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088664.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..637
                     /product="probable inactive receptor kinase At5g58300"
                     /calculated_mol_wt=69737
     Region          37..>233
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          372..637
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(372..376,380,392,394,423,439..442,446,448,493,495,
                     497..498,500,511,514,527..529)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(372..376,380,392,394,423,439..442,446,493,495,
                     497..498,500,511)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(376,446,448,493,495,497,514,527..529)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     CDS             1..637
                     /gene="LOC107910652"
                     /coded_by="XM_041088664.1:305..2218"
                     /db_xref="GeneID:107910652"
ORIGIN      
        1 myvsnelync fregkknhyi lgmktvemkl asyfaafacl flccssgtva dldldeqall
       61 qfsatvphgr klnwspatpv ctswvginct kdgsrvialh lpgvglhgqi pantlgklda
      121 lmvlslrsnr lsgnlpsdvl slptlryvyl qlnnfsgdip sslppsldfl dlsfnsltgn
      181 iptaiqnltn ltglnlhnns ltgpipnfsl prlrllnlsy nhlngsvpss fqkfpassfv
      241 gnhicgppfn qcltispsps psptnfpppt vpenprrdsh kklsigaiia igvtgsalvf
      301 flllilvlsc lkkkrnqgga ltskvkggrs ekpkedfgse vqeaeknklv ffegcsynfd
      361 ledllrasae vlgkgsygtt ykaileegit vvvkrlkeva agkrefeqqm givgrlgqhp
      421 nlvplrayyy skdeklmvyd fiaagsfssl lhgsrergrp lpgwdsrvki slgaakgiay
      481 ihssgggkfi hgnikssnvl ltkdlhgcis dfgltplmts pkvpsrsagy rapeviesrk
      541 ftqksdvysf gvlllemltg kaatqssghe dvvdlprwvq svvreewtae vfdvelmkyq
      601 nieeelvqml qiamtcvarl pdmrptmeev trmieei
//
LOCUS       XP_016677684             979 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium
            hirsutum].
ACCESSION   XP_016677684
VERSION     XP_016677684.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016822195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016677684.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..979
                     /product="LRR receptor-like serine/threonine-protein
                     kinase GSO1"
                     /calculated_mol_wt=106864
     Region          29..68
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          52..419
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          74..97
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          98..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          146..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          170..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          194..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..241
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          242..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          266..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..>858
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          290..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          314..338
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..362
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          363..386
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          387..410
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          411..434
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          435..458
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          459..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          507..530
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          531..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          555..577
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          578..601
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          602..625
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          626..649
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          650..697
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          698..721
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          722..745
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          746..769
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          770..794
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          795..818
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          819..839
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..979
                     /gene="LOC107896897"
                     /coded_by="XM_016822195.2:653..3592"
                     /db_xref="GeneID:107896897"
ORIGIN      
        1 mdstqisrfs lfitvfscil afsfgdnsss tdahwllrik sklvdpagvl eswslrahic
       61 swngltcshd eafvialnls astlsgsipt elwnlvslqt ldlslnlitg sippeigrlr
      121 nlrtlilfan nlsgkiptei gllkklqvlr igdnmlaaqi ppsignltel rvlglaycql
      181 ngsipaemgn lknlvfldlq hnslsgfipa eihnceelqn faasnnmldg eipasigklk
      241 slqilnlann slsgsippei sglsnlqyln llgnrlngei pwelnhlvql qkldlssnnl
      301 sgtinllnih lqnlqvvvfs nnaltgsips nfclknsnlq qlflaqnkls ggfplgllnc
      361 sslqqldlsn nnlegelppt idklekltdl llnnnsfngs lppeignmsn lenlylfdnm
      421 itgsipveig klqslstiyl ydnqmsgsip meltncaslt aidffgnhfs gsipetigkl
      481 kdlvllqlrq ndlsgpipps lgyckklqql aladnklsgs lpatfrflsq lstitlynns
      541 fegplpdsly slrnlkiinf shnkfsgtil pltgsnslta ldltnnsfsg sipsrlaist
      601 nlgrlrlann llngsipsel grlkelifld lsfnnltgev psqlstcqkl qhlllndnhf
      661 tgkmpswlgs lhdlgelhls snnfqgqvpa elgncsrllk lslhtnnlsg qipheigqlt
      721 slnvlnlqrn nlsgsippti qqckklyelr lsenllsgpi pseigkltel qvildlsrnl
      781 lsgeipsslg dllklerlnl sfnrlggelp sslgqltslv mlnlsnnhlr gqlsstfsgf
      841 pptsfsgndk lcgppltscm esaghennil sstavvciiv aivftstvic lvmiyimlrm
      901 wcnmrevlis nssegggngi eqikredqer wmygdekkrk geywrvmssl alvpsqnhnd
      961 hissscifqv kmdtkklgi
//
LOCUS       XP_040944599            1583 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MODIFIER OF SNC1 1 [Gossypium hirsutum].
ACCESSION   XP_040944599
VERSION     XP_040944599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088665.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1583
                     /product="protein MODIFIER OF SNC1 1"
                     /calculated_mol_wt=171951
     Region          <15..>106
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..1583
                     /gene="LOC121214685"
                     /coded_by="XM_041088665.1:426..5177"
                     /db_xref="GeneID:121214685"
ORIGIN      
        1 mtsstlsger rwasarrsgm tvlgkvavpk pinlpsqrle nhgldpnvei vpkgtlswgs
       61 ksssssnawg sstlspntdg ggsspshlsa rpssggsgtr pstagsdrah epanargsds
      121 rpssssgpva snqtslaslr prsaetrpgs sqlsrfaeav peysgawngs gtaeklgmas
      181 skndgfslts gdfptlgsek dtsgknaelq ehgsqgrpgs ssgvapikek igtsvvdisg
      241 nenqksgaan fwrrdnppys edgvrpsmek whtdprgphp ypntaippqh ydawhgppin
      301 nhpggvwyrg ppagppygpp vppggfplep fpyyrpqipg sahanprpvp ppgagprgph
      361 pkngdmyrgp mpdafvrpgm pirpafypgp vayegyygpp mgycnlnere mpfmgmpagp
      421 aynrhpgqsa pdpggsharp sgfgppgkal vaehfesghp ndnrgpykvl lkqhegwegk
      481 deehgsednv tsvvekgdlk rtsswendwk adqrkeeevn mrtvvdespt qisdhhakvk
      541 ssegvkkara ygdisvkkme hpedpgaakd ssliqkiesl naksrasdgh yesvcrmeel
      601 knksqvvnak akhfanevat gsravfhdra lasgmtcpts nevgvsagdk rldlpaagga
      661 dmnrrsthsr hgrtdhrgrg rfnsedvdgw rkkppftdss nvksaahfen psesnvqdyv
      721 sleasdksgs ypqardegel mppvydpsds eaqrsmmrel akqrakqrqk eeeerardqk
      781 akalakleel nrrtqtaegf tpklesvpdi avqskqeesr mltdeipssr seitssvssp
      841 tvvadvgqss tvelekptvl snqqpsvstk iahkatteih ncslplqqrv nnddaslhnh
      901 pkasdgstsk qkhmgywkkd pnsldkssse kyisagttel pnirtdavvd agpsaeavan
      961 etdsisesfs tqyvvnestm lqkkknsrsg knkhkveeas staplwsgvs ketnhtssve
     1021 sskpkssesk ldphsfqslt eskdgnqsse qdvafpneea ygqlnnqwks qhsrrmprnp
     1081 qayksavhgd avvwapvrsh vkvevteevs hklavenvas qtknddqvqn nprnkraeie
     1141 ryipkpvake maqqvisqqp vahsddpnat deivgradsg sygiecsqhs gtatrtvgnp
     1201 tesrndgrqg rghgswrqra saeatlqglq drhystpskn aqksteqkqp qkpdfslvke
     1261 qpkydewnts dgwnmpenpd stvppvpvsr yqgmtgrgkr hpfkgqkggg nnynsdhkkt
     1321 nygeadklnp qssapemaql gspaaskenr gggdrsashw qpksspinqr gsrpdsdqnv
     1381 gaeirtnkkd sapqakvshp sqpekqtskg vtlppkdhcv sekgveeahn vghheskrer
     1441 nvtshkgrph spnqgpglpv eappsnmdtr neqqsisgfr kngnqtnqyg rghesrgdwg
     1501 ssgqemkqhn ppanrerqrh nshyeyqpvg pqnnnnnsra nnpegrregs hgtgaryker
     1561 gqthsrrggg nfhgrlsgig gye
//
LOCUS       XP_040944600             435 aa            linear   PLN 06-AUG-2024
DEFINITION  probable apyrase 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944600
VERSION     XP_040944600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088666.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..435
                     /product="probable apyrase 7 isoform X1"
                     /calculated_mol_wt=48371
     Region          47..420
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..435
                     /gene="LOC107887854"
                     /coded_by="XM_041088666.1:172..1479"
                     /db_xref="GeneID:107887854"
ORIGIN      
        1 mdrvlskvsl llrqfilkqt siedvvglcq mkgnnvqsrd livnidyelv dcgstgtrvn
       61 vfewekggli sdnlpsllhs ypddltkgpl akqschyhcm qtepglhkfv gngsgvrasl
      121 epliawaeqr vpherhghtp iiilataglr rlvardakqv lddieivire hsfvytknsi
      181 rvltgkeeay ygwvalnykm gslgnsskas tfglldlggs slqvvvevsd kndngnvits
      241 nigstnhkil afslpafgln eafdrtviml sqnqtygrna snrfelrhpc fssnfvqnyt
      301 cpgcamlnis dgmensetqm hrtqfsstyl igdlnweqck elvraaamnh sgsdwsqqfv
      361 drnceanssp nggndmlklt sivhhsgrfh alsgffvvym lnlsprasvt eiwkkgeqlc
      421 sssltewnid fqrkk
//
LOCUS       XP_040944601             402 aa            linear   PLN 06-AUG-2024
DEFINITION  probable apyrase 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944601
VERSION     XP_040944601.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088667.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..402
                     /product="probable apyrase 7 isoform X2"
                     /calculated_mol_wt=44797
     Region          64..387
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..402
                     /gene="LOC107887854"
                     /coded_by="XM_041088667.1:157..1365"
                     /db_xref="GeneID:107887854"
ORIGIN      
        1 mdrvlskvsl llrqfilkqt siedvvglcq mkgnnvqsrd livnidyeld dltkgplakq
       61 schyhcmqte pglhkfvgng sgvraslepl iawaeqrvph erhghtpiii lataglrrlv
      121 ardakqvldd ieivirehsf vytknsirvl tgkeeayygw valnykmgsl gnsskastfg
      181 lldlggsslq vvvevsdknd ngnvitsnig stnhkilafs lpafglneaf drtvimlsqn
      241 qtygrnasnr felrhpcfss nfvqnytcpg camlnisdgm ensetqmhrt qfsstyligd
      301 lnweqckelv raaamnhsgs dwsqqfvdrn ceansspngg ndmlkltsiv hhsgrfhals
      361 gffvvymlnl sprasvteiw kkgeqlcsss ltewnidfqr kk
//
LOCUS       XP_016666764             212 aa            linear   PLN 06-AUG-2024
DEFINITION  heme-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016666764
VERSION     XP_016666764.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811275.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666764.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..212
                     /product="heme-binding protein 2"
                     /calculated_mol_wt=23517
     Region          24..200
                     /region_name="SOUL"
                     /note="SOUL heme-binding protein; pfam04832"
                     /db_xref="CDD:461449"
     CDS             1..212
                     /gene="LOC107887127"
                     /coded_by="XM_016811275.2:107..745"
                     /db_xref="GeneID:107887127"
ORIGIN      
        1 makaprlkit vinllclvvl cgatespqye vvhaesdfei rhyrdatwms atvnelsfqk
       61 atlfgfhrlf qfiqganlny srvamtapvv tslvpgagpl hslayvvrfy lpakfqdspp
      121 tplpelnlkp yawdshyvav rkfsgfatdd ivvkqaakla tslslspwan atsathytys
      181 iaqydppfrf fgrtnevwvd vdasrfagka sf
//
LOCUS       XP_016679391             426 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016679391
VERSION     XP_016679391.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823902.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016679391.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..426
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=47538
     Region          23..400
                     /region_name="BRO1_Alix_like"
                     /note="Protein-interacting Bro1-like domain of mammalian
                     Alix and related domains; cd09034"
                     /db_xref="CDD:185761"
     Site            order(151,164,178,181..182,234,237..238,248,251..252,392,
                     394,396,398)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185761"
     CDS             1..426
                     /gene="LOC107898417"
                     /coded_by="XM_016823902.2:327..1607"
                     /db_xref="GeneID:107898417"
ORIGIN      
        1 mgclvstpkd sggnrrrpgn igevsvyvpg lripksvdff qslgghlskt lverltalrt
       61 rivvmagqea ptitrtrrkt atqhggstla dlhqaledyl pvllglvtdg sqlqykvqfi
      121 wvnqeddaee tamfnawyev lsvlhlmaml llsqanllll prtsadgyqp kvseesrras
      181 idiflkaagy ldcavrhvlp qlpselrrnl pvdlaegvlr alclqalgqg vdiqlgmaid
      241 stkatlavkr rlacemvkyw qqaqdnimnl plsngwgekh rlfikwkyie akaaayyyhg
      301 lildegntek shgmavaalq aadeyfkesk racevfnaah plsrnpplwg tmkylsekip
      361 kdtsskvrin rdlysyekim etaptlpdfa lalkpdeyql ppadpswnen vqlshiginq
      421 vnhdkr
//
LOCUS       XP_040944603             426 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944603
VERSION     XP_040944603.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088669.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..426
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=47538
     Region          23..400
                     /region_name="BRO1_Alix_like"
                     /note="Protein-interacting Bro1-like domain of mammalian
                     Alix and related domains; cd09034"
                     /db_xref="CDD:185761"
     Site            order(151,164,178,181..182,234,237..238,248,251..252,392,
                     394,396,398)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185761"
     CDS             1..426
                     /gene="LOC107898417"
                     /coded_by="XM_041088669.1:406..1686"
                     /db_xref="GeneID:107898417"
ORIGIN      
        1 mgclvstpkd sggnrrrpgn igevsvyvpg lripksvdff qslgghlskt lverltalrt
       61 rivvmagqea ptitrtrrkt atqhggstla dlhqaledyl pvllglvtdg sqlqykvqfi
      121 wvnqeddaee tamfnawyev lsvlhlmaml llsqanllll prtsadgyqp kvseesrras
      181 idiflkaagy ldcavrhvlp qlpselrrnl pvdlaegvlr alclqalgqg vdiqlgmaid
      241 stkatlavkr rlacemvkyw qqaqdnimnl plsngwgekh rlfikwkyie akaaayyyhg
      301 lildegntek shgmavaalq aadeyfkesk racevfnaah plsrnpplwg tmkylsekip
      361 kdtsskvrin rdlysyekim etaptlpdfa lalkpdeyql ppadpswnen vqlshiginq
      421 vnhdkr
//
LOCUS       XP_016679396             426 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016679396
VERSION     XP_016679396.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823907.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016679396.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..426
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=47538
     Region          23..400
                     /region_name="BRO1_Alix_like"
                     /note="Protein-interacting Bro1-like domain of mammalian
                     Alix and related domains; cd09034"
                     /db_xref="CDD:185761"
     Site            order(151,164,178,181..182,234,237..238,248,251..252,392,
                     394,396,398)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185761"
     CDS             1..426
                     /gene="LOC107898417"
                     /coded_by="XM_016823907.2:241..1521"
                     /db_xref="GeneID:107898417"
ORIGIN      
        1 mgclvstpkd sggnrrrpgn igevsvyvpg lripksvdff qslgghlskt lverltalrt
       61 rivvmagqea ptitrtrrkt atqhggstla dlhqaledyl pvllglvtdg sqlqykvqfi
      121 wvnqeddaee tamfnawyev lsvlhlmaml llsqanllll prtsadgyqp kvseesrras
      181 idiflkaagy ldcavrhvlp qlpselrrnl pvdlaegvlr alclqalgqg vdiqlgmaid
      241 stkatlavkr rlacemvkyw qqaqdnimnl plsngwgekh rlfikwkyie akaaayyyhg
      301 lildegntek shgmavaalq aadeyfkesk racevfnaah plsrnpplwg tmkylsekip
      361 kdtsskvrin rdlysyekim etaptlpdfa lalkpdeyql ppadpswnen vqlshiginq
      421 vnhdkr
//
LOCUS       XP_016679401             369 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016679401
VERSION     XP_016679401.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016823912.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..369
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=40764
     Region          23..>293
                     /region_name="BRO1_Alix_like"
                     /note="Protein-interacting Bro1-like domain of mammalian
                     Alix and related domains; cl14649"
                     /db_xref="CDD:472700"
     CDS             1..369
                     /gene="LOC107898417"
                     /coded_by="XM_016823912.2:307..1416"
                     /db_xref="GeneID:107898417"
ORIGIN      
        1 mgclvstpkd sggnrrrpgn igevsvyvpg lripksvdff qslgghlskt lverltalrt
       61 rivvmagqea ptitrtrrkt atqhggstla dlhqaledyl pvllglvtdg sqlqykvqfi
      121 wvnqeddaee tamfnawyev lsvlhlmaml llsqanllll prtsadgyqp kvseesrras
      181 idiflkaagy ldcavrhvlp qlpselrrnl pvdlaegvlr alclqalgqg vdiqlgmaid
      241 stkatlavkr rlacemvkyw qqaqdnimnl plsngwgekh rlfikwkyie aksqpsltap
      301 tikkpslcqp fdqktatgsc acgthappyf fyptptrrrv rvcgprlqpl lssvnlpivh
      361 pptvvlspy
//
LOCUS       XP_016694152             545 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FREE1 [Gossypium hirsutum].
ACCESSION   XP_016694152
VERSION     XP_016694152.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838663.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..545
                     /product="protein FREE1"
                     /calculated_mol_wt=59611
     Region          244..>322
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          393..456
                     /region_name="FYVE"
                     /note="Protein present in Fab1, YOTB, Vac1, and EEA1;
                     smart00064"
                     /db_xref="CDD:214499"
     CDS             1..545
                     /gene="LOC107910699"
                     /coded_by="XM_016838663.2:200..1837"
                     /db_xref="GeneID:107910699"
ORIGIN      
        1 mqqgdfsssy yhpsnpntsn psqfhqspya sappfspsdy qnpdpsyapp ppttlnsqps
       61 fnqhpiapks apaapsfppy dspvsqppyy qpydqypsyv ppppdsnpnp ippyystpyn
      121 qigssqssvp paydnpydns mkldqssssy fddkfgaryn qsrydmgsdl ygkrydsysh
      181 fgddggygdg vyayeggkve pygasgtspk sstwvqfddy grainfpsgk dssgsssgki
      241 vravpkaetl eavksrvqkf rvkllseggg egpvdvicqi gldgirmldp stsrtlriyp
      301 ienitrcevt dtstfafwsk ssvdieprri glqsnsyttn tlldivtaat vqvkemggrs
      361 rppdslktte qpsekkkgfg dwmnlmkpgt eekdhwvpde avskctacgt dfgafvrkhh
      421 crncgdifcd kctqgrialt adenaqpvrv cdrcmaevtq rlsiaketas kpaalqshed
      481 larkleemek ncrassgsks dgsdrrmkev acpicavhlq vqvpssgset iecgvcqhpf
      541 lvsah
//
LOCUS       XP_040944604             286 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prolyl 4-hydroxylase 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944604
VERSION     XP_040944604.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088670.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..286
                     /product="probable prolyl 4-hydroxylase 3 isoform X1"
                     /calculated_mol_wt=32363
     Region          78..285
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..286
                     /gene="LOC107910698"
                     /coded_by="XM_041088670.1:165..1025"
                     /db_xref="GeneID:107910698"
ORIGIN      
        1 makvrhsrft akkrltvtlv lsilfmltiv llmllglgif slpmttddss sydltsyrrm
       61 asergrlgnr gekwtevlsw eprasiyhnf lskeeceyli kiakpfmkks svvdsktgks
      121 kdsrvrtssg mflkrgqdki isdiekriae ysfipiehge glqvlhyevg qkyephfdyf
      181 vdeyntrhgg qrlatmlmyl sdveeggeti fpnakgnisa vpwwdelskc gkgglavkpk
      241 mgdallfwsm kpdatvdpss lhggcpvivg dkwsstkwmh vneykk
//
LOCUS       XP_040944605             236 aa            linear   PLN 06-AUG-2024
DEFINITION  probable prolyl 4-hydroxylase 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944605
VERSION     XP_040944605.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088671.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..236
                     /product="probable prolyl 4-hydroxylase 3 isoform X2"
                     /calculated_mol_wt=26781
     Region          28..235
                     /region_name="PLN00052"
                     /note="prolyl 4-hydroxylase; Provisional"
                     /db_xref="CDD:177683"
     CDS             1..236
                     /gene="LOC107910698"
                     /coded_by="XM_041088671.1:165..875"
                     /db_xref="GeneID:107910698"
ORIGIN      
        1 makvrhsrft akkrgrlgnr gekwtevlsw eprasiyhnf lskeeceyli kiakpfmkks
       61 svvdsktgks kdsrvrtssg mflkrgqdki isdiekriae ysfipiehge glqvlhyevg
      121 qkyephfdyf vdeyntrhgg qrlatmlmyl sdveeggeti fpnakgnisa vpwwdelskc
      181 gkgglavkpk mgdallfwsm kpdatvdpss lhggcpvivg dkwsstkwmh vneykk
//
LOCUS       XP_016694145             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694145
VERSION     XP_016694145.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838656.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13394
     Region          60..>119
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..119
                     /gene="LOC107910697"
                     /coded_by="XM_016838656.2:597..956"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerss vngssivnes nifhgkwirl edagyavga
//
LOCUS       XP_016694148             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694148
VERSION     XP_016694148.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838659.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13394
     Region          60..>119
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..119
                     /gene="LOC107910697"
                     /coded_by="XM_016838659.2:541..900"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerss vngssivnes nifhgkwirl edagyavga
//
LOCUS       XP_016694147             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694147
VERSION     XP_016694147.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838658.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13394
     Region          60..>119
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..119
                     /gene="LOC107910697"
                     /coded_by="XM_016838658.2:582..941"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerss vngssivnes nifhgkwirl edagyavga
//
LOCUS       XP_016694146             119 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694146
VERSION     XP_016694146.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838657.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..119
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=13394
     Region          60..>119
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..119
                     /gene="LOC107910697"
                     /coded_by="XM_016838657.2:624..983"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerss vngssivnes nifhgkwirl edagyavga
//
LOCUS       XP_040944606             115 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944606
VERSION     XP_040944606.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088672.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..115
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=13096
     Region          60..>88
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..115
                     /gene="LOC107910697"
                     /coded_by="XM_041088672.1:597..944"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerss vngssivnes nifhgkwirl edagy
//
LOCUS       XP_016694150              99 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694150
VERSION     XP_016694150.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838661.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..99
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=11237
     Region          60..>99
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..99
                     /gene="LOC107910697"
                     /coded_by="XM_016838661.2:586..885"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerrl edagyavga
//
LOCUS       XP_016694151              98 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694151
VERSION     XP_016694151.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838662.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..98
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=10938
     Region          39..>98
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..98
                     /gene="LOC107910697"
                     /coded_by="XM_016838662.2:594..890"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerssv ngssivnesn ifhgkwirle dagyavga
//
LOCUS       XP_040944607              98 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944607
VERSION     XP_040944607.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088673.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..98
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=10938
     Region          39..>98
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..98
                     /gene="LOC107910697"
                     /coded_by="XM_041088673.1:538..834"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerssv ngssivnesn ifhgkwirle dagyavga
//
LOCUS       XP_040944608              95 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944608
VERSION     XP_040944608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088674.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..95
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=10939
     Region          60..>95
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..95
                     /gene="LOC107910697"
                     /coded_by="XM_041088674.1:595..882"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgailefni fniiffgiwl fqagetfclw qgflfnphfk tlltlcwdkv
       61 slsafaflfs elvqynqtrv dniaelerrl edagy
//
LOCUS       XP_040944609              94 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944609
VERSION     XP_040944609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088675.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..94
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=10640
     Region          39..>67
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..94
                     /gene="LOC107910697"
                     /coded_by="XM_041088675.1:538..822"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerssv ngssivnesn ifhgkwirle dagy
//
LOCUS       XP_040944610              78 aa            linear   PLN 06-AUG-2024
DEFINITION  trafficking protein particle complex subunit 5 isoform X7
            [Gossypium hirsutum].
ACCESSION   XP_040944610
VERSION     XP_040944610.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088676.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..78
                     /product="trafficking protein particle complex subunit 5
                     isoform X7"
                     /calculated_mol_wt=8781
     Region          39..>78
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..78
                     /gene="LOC107910697"
                     /coded_by="XM_041088676.1:583..819"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerrle dagyavga
//
LOCUS       XP_040944611              78 aa            linear   PLN 06-AUG-2024
DEFINITION  trafficking protein particle complex subunit 5 isoform X7
            [Gossypium hirsutum].
ACCESSION   XP_040944611
VERSION     XP_040944611.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088677.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..78
                     /product="trafficking protein particle complex subunit 5
                     isoform X7"
                     /calculated_mol_wt=8781
     Region          39..>78
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..78
                     /gene="LOC107910697"
                     /coded_by="XM_041088677.1:524..760"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerrle dagyavga
//
LOCUS       XP_040944612              78 aa            linear   PLN 06-AUG-2024
DEFINITION  trafficking protein particle complex subunit 5 isoform X7
            [Gossypium hirsutum].
ACCESSION   XP_040944612
VERSION     XP_040944612.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088678.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..78
                     /product="trafficking protein particle complex subunit 5
                     isoform X7"
                     /calculated_mol_wt=8781
     Region          39..>78
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..78
                     /gene="LOC107910697"
                     /coded_by="XM_041088678.1:566..802"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerrle dagyavga
//
LOCUS       XP_040944613              74 aa            linear   PLN 06-AUG-2024
DEFINITION  trafficking protein particle complex subunit 5 isoform X8
            [Gossypium hirsutum].
ACCESSION   XP_040944613
VERSION     XP_040944613.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088679.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..74
                     /product="trafficking protein particle complex subunit 5
                     isoform X8"
                     /calculated_mol_wt=8483
     Region          39..>74
                     /region_name="TRAPPC_bet3-like"
                     /note="Bet3-like domains of TRAPP; cl21538"
                     /db_xref="CDD:473903"
     CDS             1..74
                     /gene="LOC107910697"
                     /coded_by="XM_041088679.1:589..813"
                     /db_xref="GeneID:107910697"
ORIGIN      
        1 medvsislkg ypgetfclwq gflfnphfkt lltlcwdkvs lsafaflfse lvqynqtrvd
       61 niaelerrle dagy
//
LOCUS       XP_040944614             121 aa            linear   PLN 06-AUG-2024
DEFINITION  NEP1-interacting protein-like 1 [Gossypium hirsutum].
ACCESSION   XP_040944614
VERSION     XP_040944614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088680.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="NEP1-interacting protein-like 1"
                     /calculated_mol_wt=13691
     Region          <87..118
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..121
                     /gene="LOC107910695"
                     /coded_by="XM_041088680.1:707..1072"
                     /db_xref="GeneID:107910695"
ORIGIN      
        1 mglmygaavg vkegsflsik lfqisllics sndsalatry llqpinvfes atpfiqvpwn
       61 keglsedsmd kipkmritee ndllpwetvh rlpqchhtfh iscvqkwlmg hkscplcrrn
      121 f
//
LOCUS       XP_016694143             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694143
VERSION     XP_016694143.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838654.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..106
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12256
     CDS             1..106
                     /gene="LOC107910694"
                     /coded_by="XM_016838654.2:274..594"
                     /db_xref="GeneID:107910694"
ORIGIN      
        1 mitrsnlaeq lreyqlrskh dwasvsffss tsnlpsyrvd vmvfviwelv ilaflvfsav
       61 slyfghmqla filvcitmll llcmkitkqv klarkkkrrm llplsi
//
LOCUS       XP_016694141             576 aa            linear   PLN 06-AUG-2024
DEFINITION  4-coumarate--CoA ligase-like 5 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694141
VERSION     XP_016694141.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838652.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..576
                     /product="4-coumarate--CoA ligase-like 5 isoform X1"
                     /calculated_mol_wt=62854
     Region          31..568
                     /region_name="4CL"
                     /note="4-Coumarate-CoA Ligase (4CL); cd05904"
                     /db_xref="CDD:341230"
     Site            order(200,203..208,210..211)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341230"
     Site            order(243,248..249,253,293..294,297,318,320..323,343..348,
                     352..353,429,441,444,446,450,452..454,482,537,543)
                     /site_type="active"
                     /db_xref="CDD:341230"
     Site            order(243,293..294,297,320,452..454,537,543)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341230"
     Site            order(247,321..323,344..348,429,441,444,446,448,450,482)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341230"
     CDS             1..576
                     /gene="LOC107910693"
                     /coded_by="XM_016838652.2:244..1974"
                     /db_xref="GeneID:107910693"
ORIGIN      
        1 maenmslaid prsgfcrsns tfyskrkpip lpknhsldvt tfisarahhg kvafidaatg
       61 rhltfselwr avdsvatcls dmgirkghvv lllspnsiff pivclsvmsl gaiitttnpl
      121 ntaneigkqv adskpvlaft ipqllpklag stipivlled hlssqageak ivttlhqmmk
      181 repsgsrvrd rvnqddtatl lyssgttgas kgvvsshrnl iamvqtvinr fsievgekfi
      241 ctvpmfhiyg lvafatglla sgstvivlsk femhdmlsti ekyretylpl vppilvamvn
      301 aadqirkkyd lsslhsalsg gaplskevie gflekypnvk ilqgygltes tgigastdsl
      361 eesrkygtag mlspsmeakv vdpdsgkaln vnqtgelrlr gpsvmkgyfs npeattstld
      421 sdgwlrtgdl cyidedgfif ivdrlkelik ykgyqvndpp nwlafctrdi tnkqsesfdl
      481 wqvppaelea lllshpeild aavipfpdre vgqfpmayvv rkpgsnlset gvmdfvgrqv
      541 apykrirkva fvasipknps gkilrkdlik latskl
//
LOCUS       XP_016694142             549 aa            linear   PLN 06-AUG-2024
DEFINITION  4-coumarate--CoA ligase-like 5 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694142
VERSION     XP_016694142.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838653.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..549
                     /product="4-coumarate--CoA ligase-like 5 isoform X2"
                     /calculated_mol_wt=59646
     Region          31..541
                     /region_name="4CL"
                     /note="4-Coumarate-CoA Ligase (4CL); cd05904"
                     /db_xref="CDD:341230"
     Site            order(200,203..208,210..211)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341230"
     Site            order(243,248..249,253,293..294,297,318,320..323,343..348,
                     352..353,429,441,444,446,450,452..455,510,516)
                     /site_type="active"
                     /db_xref="CDD:341230"
     Site            order(243,293..294,297,320,452..454,510,516)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341230"
     Site            order(247,321..323,344..348,429,441,444,446,448,450,455)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341230"
     CDS             1..549
                     /gene="LOC107910693"
                     /coded_by="XM_016838653.2:244..1893"
                     /db_xref="GeneID:107910693"
ORIGIN      
        1 maenmslaid prsgfcrsns tfyskrkpip lpknhsldvt tfisarahhg kvafidaatg
       61 rhltfselwr avdsvatcls dmgirkghvv lllspnsiff pivclsvmsl gaiitttnpl
      121 ntaneigkqv adskpvlaft ipqllpklag stipivlled hlssqageak ivttlhqmmk
      181 repsgsrvrd rvnqddtatl lyssgttgas kgvvsshrnl iamvqtvinr fsievgekfi
      241 ctvpmfhiyg lvafatglla sgstvivlsk femhdmlsti ekyretylpl vppilvamvn
      301 aadqirkkyd lsslhsalsg gaplskevie gflekypnvk ilqgygltes tgigastdsl
      361 eesrkygtag mlspsmeakv vdpdsgkaln vnqtgelrlr gpsvmkgyfs npeattstld
      421 sdgwlrtgdl cyidedgfif ivdrlkelik ykgyqvppae lealllshpe ildaavipfp
      481 drevgqfpma yvvrkpgsnl setgvmdfvg rqvapykrir kvafvasipk npsgkilrkd
      541 liklatskl
//
LOCUS       XP_016694140             517 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: serine/threonine-protein kinase BSK1
            [Gossypium hirsutum].
ACCESSION   XP_016694140
VERSION     XP_016694140.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838651.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694140.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..517
                     /product="LOW QUALITY PROTEIN: serine/threonine-protein
                     kinase BSK1"
                     /calculated_mol_wt=58056
     Region          92..335
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          405..>507
                     /region_name="PLN03088"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional"
                     /db_xref="CDD:215568"
     Site            order(412..413,416..417,419,444,447..448,451..452,
                     454..455,478,481..482,485..486,489)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          412..436
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          442..472
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          477..503
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..517
                     /gene="LOC107910692"
                     /coded_by="XM_016838651.2:429..1982"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107910692"
ORIGIN      
        1 mgccestflr rpdslhktnh hhhlyntntn rltqtnngps spsiagkdsl aggaagfpdf
       61 sefslaelka atnnfssdfi vyecgekapn vvykgrlqnv nnrrriaikk ftrlawpdpk
      121 qfadeargvg klrhkrvanl igyccdgder llvaeympnd tlakhlfhwe nqtiewamrl
      181 rvalyiaeal dycssegrpl yhdlnayrvl fdengdprls cfglmknsrd gksystnlay
      241 tppeylrngr vtpesvifsf gtvlldllsg khippshald mirgknilll mdshleghfs
      301 seeatvvfdl asqclqyepr erpntkdlvt tlaplqnkpd vpsyvmlgip kheegpptpq
      361 qplspmgdac srmdltaihq xlvmthykdd egtnelsfqe wtqqmrdmle arkrgdvafr
      421 dkefktavdc ysqfidvgtm vsptvyarrs lcyllcdqpd aalrdamqaq cvypdwstaf
      481 ymqavalakl dmqkdaadml neaaaleekr qrggrgs
//
LOCUS       XP_016741776             555 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: probable acyl-activating enzyme 1, peroxisomal
            [Gossypium hirsutum].
ACCESSION   XP_016741776
VERSION     XP_016741776.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016886287.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016741776.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..555
                     /product="LOW QUALITY PROTEIN: probable acyl-activating
                     enzyme 1, peroxisomal"
                     /calculated_mol_wt=60786
     Region          11..540
                     /region_name="ttLC_FACS_AEE21_like"
                     /note="Fatty acyl-CoA synthetases similar to LC-FACS from
                     Thermus thermophiles and Arabidopsis; cd12118"
                     /db_xref="CDD:341283"
     Site            order(192,195..200,202..203)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341283"
     Site            order(195,235..236,282,284..285,288,309..310,330..335,427,
                     439,442,450..453,514)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341283"
     Site            order(195,310..312,330..335,427,442,444,448,453)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341283"
     Site            order(235,284..285,288,309,450..452,508,514)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341283"
     CDS             1..555
                     /gene="LOC107951290"
                     /coded_by="XM_016886287.2:115..1782"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107951290"
ORIGIN      
        1 megsikcsan yvpltpitfl draaviypds vslvhgdvky twkqtrqrcv rlasalaqlg
       61 iaprhvvavl apnvpamyel hfgvpmagav lctlnirhds stvavllkhs eakflfvdye
      121 flhiaegalk ilsnksaklp qlvlipdhdr qvpsrsntns tsanldydsl lamgkldfdi
      181 rrpedewepi slnytsgtts spkgviyshr gaylnslati llnempsmpv ylwtvpmfhc
      241 ngwcltwgva aqggtnvclr nvsaggifsn iakykvthmg gaptvlnmii napagnqrrl
      301 pgkvvimtga apppphvlfk mdelgfrvvh sygltetygp givctwkpew dslpqevqak
      361 ikarqglnhl gieeidvkdp vtmksmppda rsigevmfrg ntvmngylkn ikatkdafng
      421 gwfrsgdlgv rhpdgyielk drskdiiisg gxnissieve svlfshpavl eaavvarpdd
      481 ywgetpcafv klkdgheasv deiikycrdn lphymaprtv vfqdlpktst gktqkyvlre
      541 kakalgsmsk skskl
//
LOCUS       XP_040944616             290 aa            linear   PLN 06-AUG-2024
DEFINITION  xyloglucan endotransglucosylase/hydrolase protein 22 [Gossypium
            hirsutum].
ACCESSION   XP_040944616
VERSION     XP_040944616.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088682.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..290
                     /product="xyloglucan endotransglucosylase/hydrolase
                     protein 22"
                     /calculated_mol_wt=32642
     Region          22..287
                     /region_name="GH16_XET"
                     /note="Xyloglucan endotransglycosylase, member of glycosyl
                     hydrolase family 16; cd02176"
                     /db_xref="CDD:185685"
     Site            order(34..35,56..57,87,89,91,101,103,105,118,120,130,132,
                     188,190,194..195)
                     /site_type="active"
                     /db_xref="CDD:185685"
     Site            order(101,103,105)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:185685"
     CDS             1..290
                     /gene="LOC107910690"
                     /coded_by="XM_041088682.1:61..933"
                     /db_xref="GeneID:107910690"
ORIGIN      
        1 msssglkftf lmplmvaclm aasasifhnd fditwgdgrg kivnnrevlt lsldkasgsg
       61 fqskneylfg kidmqlklvp gnsagtvtay ylsskgstwd eidfeflgnl sgdpyilhtn
      121 vfsqgkgnre qqfylwfdpt adfhtysilw npqriifsvd gtpirefknm eslgvpfpkn
      181 qpmriysslw naddwatrgg lvktdwtqap ftasyrnfna dacvwsngas scksntspss
      241 astnrtwfsq emdsamqqrl qwvqknymiy nycndakrfp qglppecnms
//
LOCUS       XP_016694137             555 aa            linear   PLN 06-AUG-2024
DEFINITION  probable acyl-activating enzyme 1, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_016694137
VERSION     XP_016694137.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838648.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694137.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..555
                     /product="probable acyl-activating enzyme 1, peroxisomal"
                     /calculated_mol_wt=60919
     Region          11..540
                     /region_name="ttLC_FACS_AEE21_like"
                     /note="Fatty acyl-CoA synthetases similar to LC-FACS from
                     Thermus thermophiles and Arabidopsis; cd12118"
                     /db_xref="CDD:341283"
     Site            order(192,195..200,202..203)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341283"
     Site            order(195,235..236,282,284..285,288,309..310,330..335,427,
                     439,442,450..453,514)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341283"
     Site            order(195,310..312,330..335,427,442,444,448,453)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341283"
     Site            order(235,284..285,288,309,450..452,508,514)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341283"
     CDS             1..555
                     /gene="LOC107910688"
                     /coded_by="XM_016838648.2:147..1814"
                     /db_xref="GeneID:107910688"
ORIGIN      
        1 megsikcsan yvpltpitfl draaviypds vslvhgdvky twkqtrqrcv rlasalaqlg
       61 iaprhvvavl apnvpamyel hfgvpmagav lctlnirhds stvavllkhs eakflfvdye
      121 flhiaegalk ilsntsaklp qlvlipdhdr qvpsrsntns tsanldydsl lamgkldfdi
      181 rrpedewepi slnytsgtts spkgviyshr gaylnslati llnempsmpv ylwtvpmfhc
      241 ngwcltwgva aqggtnvclr nvsaggifsn iakykvthmg gaptvlnmii napagnqrrl
      301 pgkvvimtga apppphvlfk mdelgfrvvh sygltetygp givctwkpew dslpqevqak
      361 ikarqglnhl gieeidvkdp vtmksmppda rsigevmfrg ntvmngylkn ikatkdafng
      421 gwfrsgdlgv rhpdgyielk drskdiiisg genissieve svlfshpavl eaavvarpdd
      481 ywgetpcafv klkdgheasv deiikycrdn lphymtprtv vfqdlpktst gktqkyvlre
      541 kakalgsmsk skskl
//
LOCUS       XP_016694136             198 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694136
VERSION     XP_016694136.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838647.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..198
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22103
     CDS             1..198
                     /gene="LOC107910687"
                     /coded_by="XM_016838647.2:131..727"
                     /db_xref="GeneID:107910687"
ORIGIN      
        1 mskmkydskp plaakspirl rprrslpsns aslqtppgsl trsqkpiltw gieeseirpe
       61 yrsiscelrv lartvrdelg ngeteaaglg kktvlsvtns cpvfergrfy eeysarrner
      121 lktkkgetqn esktghhlgv tvesskrrgs skkleslrks veiqtpryll rsmnkvnkkp
      181 plpvsvtatq kktragkl
//
LOCUS       XP_016694133             264 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichol-phosphate mannosyltransferase subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016694133
VERSION     XP_016694133.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838644.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..264
                     /product="dolichol-phosphate mannosyltransferase subunit
                     1"
                     /calculated_mol_wt=29587
     Region          23..264
                     /region_name="PLN02726"
                     /note="dolichyl-phosphate beta-D-mannosyltransferase"
                     /db_xref="CDD:215385"
     CDS             1..264
                     /gene="LOC107910686"
                     /coded_by="XM_016838644.2:258..1052"
                     /db_xref="GeneID:107910686"
ORIGIN      
        1 mrnesakqkn tenkdlgqgi yteeekmeqk nkysiivpty nerlnialiv ylifkhlrdv
       61 dfeiivvddg spdgtqevvk qlqklygedr illrprpkkl glgtayihgl khasgnfvvi
      121 mdadlshhpk ylpcfikkqs etgasivtgt ryvkgggvhg wnlmrkltsr ganvlaqtll
      181 wpgvsdltgs frlykksvle dvisscvskg yvfqmemivr asrkgyhiee vpitfvdrvf
      241 gssklggsei ieylkglsyl lvtt
//
LOCUS       XP_016694134             264 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichol-phosphate mannosyltransferase subunit 1 [Gossypium
            hirsutum].
ACCESSION   XP_016694134
VERSION     XP_016694134.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838645.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..264
                     /product="dolichol-phosphate mannosyltransferase subunit
                     1"
                     /calculated_mol_wt=29587
     Region          23..264
                     /region_name="PLN02726"
                     /note="dolichyl-phosphate beta-D-mannosyltransferase"
                     /db_xref="CDD:215385"
     CDS             1..264
                     /gene="LOC107910686"
                     /coded_by="XM_016838645.2:258..1052"
                     /db_xref="GeneID:107910686"
ORIGIN      
        1 mrnesakqkn tenkdlgqgi yteeekmeqk nkysiivpty nerlnialiv ylifkhlrdv
       61 dfeiivvddg spdgtqevvk qlqklygedr illrprpkkl glgtayihgl khasgnfvvi
      121 mdadlshhpk ylpcfikkqs etgasivtgt ryvkgggvhg wnlmrkltsr ganvlaqtll
      181 wpgvsdltgs frlykksvle dvisscvskg yvfqmemivr asrkgyhiee vpitfvdrvf
      241 gssklggsei ieylkglsyl lvtt
//
LOCUS       XP_016694131             873 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694131
VERSION     XP_016694131.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838642.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..873
                     /product="1,4-alpha-glucan-branching enzyme 1,
                     chloroplastic/amyloplastic isoform X1"
                     /calculated_mol_wt=99168
     Region          36..784
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
     CDS             1..873
                     /gene="LOC107910685"
                     /coded_by="XM_016838642.2:148..2769"
                     /db_xref="GeneID:107910685"
ORIGIN      
        1 mlgslsllaa tpfafrsfsp ssnnnrslss gtnhqiakql atesgrgsqk llrrhvfpvy
       61 rrvsygspis avmiddssti ttseentqni gildidsalr pfkdhfqyri kkfvdqknlf
      121 enyeggleef akgylrfgfn reedgivyre wapaaqeaqv vgdfngwdgs nhkmeknefg
      181 vwsikipdse gnpaiphnsr vkfrfkhgdg vwvdripawi kyaivdptrf gapydgvhwd
      241 pppseryefk yprppkpkap riyeahvgms sseprinsyr efaddvlpri qannyntvql
      301 mavmehsyya sfgyhvtnff svssrsgtpe dlkylidkah slglrvlmdv vhshasnnvt
      361 dglngfdvgq ssqesyfhtg ergyhklwds rlfnygnwev lrfllsnlrw wleefkfdgf
      421 rfdgvtsmly hhhginmpft gdyneyfsea tdvdavvylm lanslinnil pdatviaedv
      481 sgmpglgrpv seggigfdyr lamaipdkwi dylknkndee wsmmdlscsl tnrrytekci
      541 syaeshdqsi vgdktiaffl mdkemysgms cltdasptid rgialhkmih fitmalggeg
      601 ylnfmgnefg hpewidfpre gngwsyekcr rqwtlvdtdh lrykfmnafd ramnalddkf
      661 sflsstkqiv sctdeenkvi vfergdlvfv fnfhpentyd gykvgcdlpg kyrvaldsda
      721 wefgghgrvg hdvdhftspe gipgvpetnf nnrpnsfkvl spartcvvyy kvdesveetn
      781 ginvisvset lemdaskqkn aeesailvdh gdkenpqetn drdtasfdee lqkdgakqes
      841 ieepaasvld kkivgsklde peveemedrt pdd
//
LOCUS       XP_016694132             852 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694132
VERSION     XP_016694132.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838643.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..852
                     /product="1,4-alpha-glucan-branching enzyme 1,
                     chloroplastic/amyloplastic isoform X2"
                     /calculated_mol_wt=97115
     Region          36..784
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
     CDS             1..852
                     /gene="LOC107910685"
                     /coded_by="XM_016838643.2:120..2678"
                     /db_xref="GeneID:107910685"
ORIGIN      
        1 mlgslsllaa tpfafrsfsp ssnnnrslss gtnhqiakql atesgrgsqk llrrhvfpvy
       61 rrvsygspis avmiddssti ttseentqni gildidsalr pfkdhfqyri kkfvdqknlf
      121 enyeggleef akgylrfgfn reedgivyre wapaaqeaqv vgdfngwdgs nhkmeknefg
      181 vwsikipdse gnpaiphnsr vkfrfkhgdg vwvdripawi kyaivdptrf gapydgvhwd
      241 pppseryefk yprppkpkap riyeahvgms sseprinsyr efaddvlpri qannyntvql
      301 mavmehsyya sfgyhvtnff svssrsgtpe dlkylidkah slglrvlmdv vhshasnnvt
      361 dglngfdvgq ssqesyfhtg ergyhklwds rlfnygnwev lrfllsnlrw wleefkfdgf
      421 rfdgvtsmly hhhginmpft gdyneyfsea tdvdavvylm lanslinnil pdatviaedv
      481 sgmpglgrpv seggigfdyr lamaipdkwi dylknkndee wsmmdlscsl tnrrytekci
      541 syaeshdqsi vgdktiaffl mdkemysgms cltdasptid rgialhkmih fitmalggeg
      601 ylnfmgnefg hpewidfpre gngwsyekcr rqwtlvdtdh lrykfmnafd ramnalddkf
      661 sflsstkqiv sctdeenkvi vfergdlvfv fnfhpentyd gykvgcdlpg kyrvaldsda
      721 wefgghgrvg hdvdhftspe gipgvpetnf nnrpnsfkvl spartcvvyy kvdesveetn
      781 ginvisvset lemdaskqkn aeesaililp rlimeikkih kklmtvtppv smrnckkmeq
      841 srkvlknqql lc
//
LOCUS       XP_016694130             132 aa            linear   PLN 06-AUG-2024
DEFINITION  small nuclear ribonucleoprotein SmD3b [Gossypium hirsutum].
ACCESSION   XP_016694130
VERSION     XP_016694130.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838641.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="small nuclear ribonucleoprotein SmD3b"
                     /calculated_mol_wt=14211
     Region          8..77
                     /region_name="Sm_D3"
                     /note="Sm protein D3; cd01721"
                     /db_xref="CDD:212468"
     Site            order(20..26,28..40,42..46)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212468"
     Site            order(23..26,28,30,36..37,42,44,62..72)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212468"
     Site            order(28,30,38,41,44,52,60,62..75)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212468"
     Site            order(40,42,53,66..68)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212468"
     Site            62..73
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212468"
     CDS             1..132
                     /gene="LOC107910684"
                     /coded_by="XM_016838641.2:228..626"
                     /db_xref="GeneID:107910684"
ORIGIN      
        1 msrslgipvk llheasghvv tvelksgely rgsmvecedn wncqlenity takdgkvsql
       61 ehvfirgskv rfmvipdmlk napmfkrlda kikgkssslg vgrgravamr akaqaagrgt
      121 tggkgvvpsv rr
//
LOCUS       XP_016694129             676 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 15 [Gossypium hirsutum].
ACCESSION   XP_016694129
VERSION     XP_016694129.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838640.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..676
                     /product="U-box domain-containing protein 15"
                     /calculated_mol_wt=75154
     Region          86..194
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          <219..381
                     /region_name="UFD2"
                     /note="Ubiquitin fusion degradation protein 2
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5113"
                     /db_xref="CDD:227444"
     Region          304..356
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(305,308,310..313,332,336,345)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          391..421
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          438..463
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          441..>562
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Site            order(454,458,462,495,499,503,536,540,544)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          470..506
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          511..545
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..676
                     /gene="LOC107910683"
                     /coded_by="XM_016838640.2:140..2170"
                     /db_xref="GeneID:107910683"
ORIGIN      
        1 mspllqtpee stapsrsgrk larttmgler dkkrhgdved rrgdtlvdei givttapapn
       61 gvdlvqesvs lieyvarlgd frstqrqecy slvrrmksll plfdeirflg saippnaias
      121 lsklkkvfcl akkllktcnq gskiylales eammvkfhav heklcqalde lpfdeievsv
      181 evreqvelmv tqlrrgkrrk dtqdmelavd lmavssktde rnadiaiier lakkldlntv
      241 enlkketiai snvakergqt secieqivei lnkfkqvfgm evidvfedpv kpklllkpgs
      301 lvipheflcp itlevmrdpv iiasgqtfer esiqkwfdsn hrtcpktrer lghlslapnh
      361 alknlitqwr etnnykspnt eglaspqgss ikqeeisslv eelsscqlkv qrraakdirm
      421 lskenaesri lfaengaipa lvqlltypds kiqehavtal lnlsindtnk klianeqaip
      481 tiidvlrngh mesrensaaa lfslsmlden kvtialsdgi palvelleqg tvrgkkdavt
      541 alfnlclnqa nkaraidagi vpplllllkd kklnmvdeal smflllvthp qgryeigqls
      601 figtlvdiik kgtpknkeca asvllelssn nsshilaalq fgvyehlvdi setgtnraqr
      661 kargllqvmk tsdqlp
//
LOCUS       XP_040944617             423 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PIX13 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944617
VERSION     XP_040944617.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088683.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="probable serine/threonine-protein kinase PIX13
                     isoform X1"
                     /calculated_mol_wt=46232
     Region          95..373
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(95..99,103,125,127,156,172..175,179,181,223,225,
                     227..228,230,241,244,262..265)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(95..99,103,125,127,156,172..175,179,223,225,
                     227..228,230,241)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(99,179,181,223,225,227,244,262..265)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(240..247,258..265)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..423
                     /gene="LOC107908088"
                     /coded_by="XM_041088683.1:298..1569"
                     /db_xref="GeneID:107908088"
ORIGIN      
        1 mgncfgtqvd hhsqpptped tkklkdssnq hgvvpptgnk esgggegnet ssgrskegeg
       61 ggvpasgkiv sttlkiftla elkaatrnfr pdtvlgeggf grvfkgwvdd ktyapskvgv
      121 giavavkksn pdssqglqew qaevkflgkf chpnlvkllg ycweenqfll vyeymqkgsl
      181 enhlfrlgga epltwetrlk iaigaaqgla flhtseksvi yrdfkasnil ldgaynakls
      241 dfglaklgpi ngnshvttrv mgtygyaape yvatghlyvk sdvygfgvvl lemltglral
      301 dtnrpsgehn lvewakhslt ekrklkkimd prleeqypik aalqagelil kcleadprnr
      361 psmeevletl qkinaideqp keskatkskl kvnnhrspvh skqggtgsrn tnnhrhstar
      421 shr
//
LOCUS       XP_040944618             422 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PIX13 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944618
VERSION     XP_040944618.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088684.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..422
                     /product="probable serine/threonine-protein kinase PIX13
                     isoform X2"
                     /calculated_mol_wt=46102
     Region          94..372
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(94..98,102,124,126,155,171..174,178,180,222,224,
                     226..227,229,240,243,261..264)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(94..98,102,124,126,155,171..174,178,222,224,
                     226..227,229,240)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(98,178,180,222,224,226,243,261..264)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(239..246,257..264)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..422
                     /gene="LOC107908088"
                     /coded_by="XM_041088684.1:238..1506"
                     /db_xref="GeneID:107908088"
ORIGIN      
        1 mgncfgtqvd hhsqpptpdt kklkdssnqh gvvpptgnke sgggegnets sgrskegegg
       61 gvpasgkivs ttlkiftlae lkaatrnfrp dtvlgeggfg rvfkgwvddk tyapskvgvg
      121 iavavkksnp dssqglqewq aevkflgkfc hpnlvkllgy cweenqfllv yeymqkgsle
      181 nhlfrlggae pltwetrlki aigaaqglaf lhtseksviy rdfkasnill dgaynaklsd
      241 fglaklgpin gnshvttrvm gtygyaapey vatghlyvks dvygfgvvll emltglrald
      301 tnrpsgehnl vewakhslte krklkkimdp rleeqypika alqagelilk cleadprnrp
      361 smeevletlq kinaideqpk eskatksklk vnnhrspvhs kqggtgsrnt nnhrhstars
      421 hr
//
LOCUS       XP_016694128             539 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription initiation factor TFIID subunit 1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694128
VERSION     XP_016694128.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838639.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694128.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..539
                     /product="transcription initiation factor TFIID subunit 1
                     isoform X1"
                     /calculated_mol_wt=59211
     Region          93..329
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          170..259
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(191,196,199,238,242,248)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     CDS             1..539
                     /gene="LOC107910682"
                     /coded_by="XM_016838639.2:177..1796"
                     /db_xref="GeneID:107910682"
ORIGIN      
        1 mkrkkgrpsl lelqkrslkq hqqqqalqqn plnvlntiss tnssrrsarr npnlhggspi
       61 pdwiaggggd dddddddder qqkkhklllg lnssrnhhhy pipsahnsas cgsdsnadgg
      121 dpeaslkrrk vttlsprsdq mgekvsktth tlhgspvefg pttplpdkkl llfildrlqk
      181 kdtygvfsep vdlkelpdyc divanpmdfs tvrkkldgga yttleqfekd vflicsnaml
      241 ynapdtvyfr qarsmqelak kdfenlrqds degepqlkvv rrgrppgksl kksleslssd
      301 rvgsefssda alasgtdasg lpstynlrkg pglqkhqpad tltrpswgsh skenyancss
      361 ewenefpasv vkavmkygmk hfavdenrrd tynyslnsgh eqpifstlng elkqlipvgl
      421 iaengyvtsl arfaadlgpv vwkiasrkid svlpskvkfg pgwveeyrst eqpqclfsgk
      481 qrssnstsgn hssihlapat sgsssiaasr spllcnedik tigglssqkd ltcapslqf
//
LOCUS       XP_040944619             528 aa            linear   PLN 06-AUG-2024
DEFINITION  bromodomain-containing protein DDB_G0270170 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944619
VERSION     XP_040944619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088685.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..528
                     /product="bromodomain-containing protein DDB_G0270170
                     isoform X2"
                     /calculated_mol_wt=57995
     Region          <118..318
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          159..248
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cl02556"
                     /db_xref="CDD:445827"
     Site            order(180,185,188,227,231,237)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     CDS             1..528
                     /gene="LOC107910682"
                     /coded_by="XM_041088685.1:176..1762"
                     /db_xref="GeneID:107910682"
ORIGIN      
        1 mkrkkgrpsl lelqkrslkq hqqqqalqqn plnvlntiss tnssrrsarr npnlhggspi
       61 pdwiaggggd dddddddder qqkkhklllg lnssrnhhhy pipsahnsas cgsdsnadgg
      121 dpeaslkrrk gekvskttht lhgspvefgp ttplpdkkll lfildrlqkk dtygvfsepv
      181 dlkelpdycd ivanpmdfst vrkkldggay ttleqfekdv flicsnamly napdtvyfrq
      241 arsmqelakk dfenlrqdsd egepqlkvvr rgrppgkslk ksleslssdr vgsefssdaa
      301 lasgtdasgl pstynlrkgp glqkhqpadt ltrpswgshs kenyancsse wenefpasvv
      361 kavmkygmkh favdenrrdt ynyslnsghe qpifstlnge lkqlipvgli aengyvtsla
      421 rfaadlgpvv wkiasrkids vlpskvkfgp gwveeyrste qpqclfsgkq rssnstsgnh
      481 ssihlapats gsssiaasrs pllcnedikt igglssqkdl tcapslqf
//
LOCUS       XP_016693592             146 aa            linear   PLN 06-AUG-2024
DEFINITION  high mobility group B protein 3 [Gossypium hirsutum].
ACCESSION   XP_016693592
VERSION     XP_016693592.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..146
                     /product="high mobility group B protein 3"
                     /calculated_mol_wt=16223
     Region          40..100
                     /region_name="HMG-box_AtHMGB1-like"
                     /note="high mobility group (HMG)-box found in Arabidopsis
                     thaliana high mobility group B protein 1 (HMGB1) and
                     similar proteins; cd22005"
                     /db_xref="CDD:438821"
     Site            order(40..41,43..47,50..51,58,71..72,75,78..79,86,90,93,
                     97,100)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438821"
     CDS             1..146
                     /gene="LOC107910296"
                     /coded_by="XM_016838103.2:220..660"
                     /db_xref="GeneID:107910296"
ORIGIN      
        1 mkggksksda ksaklsvnkk sttkagkksg kaakdpnkpk rpasaffvfm eefreqykke
       61 hpknksvaav gkaggdkwks lseaekrpyv dkaekrkvey eknmkaynkr qaegpqedee
      121 eseksvsevn deeedddegs gdedde
//
LOCUS       XP_016684593             106 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016684593
VERSION     XP_016684593.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829104.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016684593.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..106
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=11224
     Region          30..>73
                     /region_name="PTH"
                     /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
                     protein that cleaves the ester bond linking the nascent
                     peptide and tRNA when peptidyl-tRNA is released
                     prematurely from the ribosome. This ensures the recycling
                     of peptidyl-tRNAs into tRNAs produced through...; cl00352"
                     /db_xref="CDD:469736"
     CDS             1..106
                     /gene="LOC107903039"
                     /coded_by="XM_016829104.2:387..707"
                     /db_xref="GeneID:107903039"
ORIGIN      
        1 mprcrcpspg rslclasrgs ssvsvipvvf mmvdaiakak gisintvnfk aqigkgnvpv
       61 mlakpqtfmn ssgwghciil qdsikassgd fcaslipthr mkkfqi
//
LOCUS       XP_016684596              97 aa            linear   PLN 06-AUG-2024
DEFINITION  peptidyl-tRNA hydrolase, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016684596
VERSION     XP_016684596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016829107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..97
                     /product="peptidyl-tRNA hydrolase, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=10192
     Region          30..>94
                     /region_name="PTH"
                     /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
                     protein that cleaves the ester bond linking the nascent
                     peptide and tRNA when peptidyl-tRNA is released
                     prematurely from the ribosome. This ensures the recycling
                     of peptidyl-tRNAs into tRNAs produced through...; cl00352"
                     /db_xref="CDD:469736"
     CDS             1..97
                     /gene="LOC107903039"
                     /coded_by="XM_016829107.2:387..680"
                     /db_xref="GeneID:107903039"
ORIGIN      
        1 mprcrcpspg rslclasrgs ssvsvipvvf mmvdaiakak gisintvnfk aqigkgnvpv
       61 mlakpqtfmn ssgesvgaiv syykiplkqv lvifvhp
//
LOCUS       XP_016693593             382 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 27 [Gossypium hirsutum].
ACCESSION   XP_016693593
VERSION     XP_016693593.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838104.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..382
                     /product="probable protein phosphatase 2C 27"
                     /calculated_mol_wt=41926
     Region          37..381
                     /region_name="PLN03145"
                     /note="Protein phosphatase 2c; Provisional"
                     /db_xref="CDD:215603"
     CDS             1..382
                     /gene="LOC107910297"
                     /coded_by="XM_016838104.2:913..2061"
                     /db_xref="GeneID:107910297"
ORIGIN      
        1 maadmdfstp ceivedsysk dnlsdmdnen ldnvkriplg kpprhlsvmr hsmgsaklia
       61 eanleldigi ivhksssdek neflpvlrsg scaeigpkqy medehicidd lighlgttae
      121 fpspgafygv fdghggtdaa lfirknilkf ivedshfpic vekaiksafl kadysfadas
      181 sldissgtta lialifgrtl iianagdcra vlgrrgraie mskdhkpnct serrrieklg
      241 gviydgylng qlsvaralgd whmkgpkgsa cplsaepelq etelseedef limgcdglwd
      301 vmssqcavtm arkelmvhnd percsrelvr ealkrntcdn ltvivvcfst dppprieipq
      361 frvrrsisae glnflkgvld sn
//
LOCUS       XP_016693594             168 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693594
VERSION     XP_016693594.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838105.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17516
     CDS             1..168
                     /gene="LOC107910298"
                     /coded_by="XM_016838105.2:239..745"
                     /db_xref="GeneID:107910298"
ORIGIN      
        1 mtilsnslvl ptslpfqlss sgshlktagg asptnlsfnc nglgklhlss srrpvvtvqa
       61 sysdgerpss asifvggfil gglvvgalgc vfapqiskav agadrkdlmk rlpkfiydee
      121 kalektrkil tekiaqlnsa iddvsaqlrs edapngvavn sdeietai
//
LOCUS       XP_016693596             285 aa            linear   PLN 06-AUG-2024
DEFINITION  N-acylphosphatidylethanolamine synthase isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693596
VERSION     XP_016693596.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="N-acylphosphatidylethanolamine synthase isoform
                     X1"
                     /calculated_mol_wt=31909
     Region          56..225
                     /region_name="LPLAT_AGPAT-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: AGPAT-like; cd07989"
                     /db_xref="CDD:153251"
     Site            order(67,70,72,94..97,148..150)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153251"
     CDS             1..285
                     /gene="LOC107910299"
                     /coded_by="XM_016838107.2:271..1128"
                     /db_xref="GeneID:107910299"
ORIGIN      
        1 mgrkmewagk ekhmrgiprk lvflavgafa kavatllntt svhnadtlir lvrsrppgip
       61 lltvsnhmst lddpllwgfk gfpsldanla rwvlsaedic fknyaltyff rlgkcipitr
      121 gagiyqehmn ealqclnnga wlhtfpegkv sqedapirrl kwgtaslivr ghvtpivlpm
      181 vhsgfeevmp ekffldrrpp fplcnkkiki migqplefdi pkmrqvaisk srgdhlfsst
      241 tsrgwpviss hgldldeaaq rclystisqq iqtvmeelrs lakss
//
LOCUS       XP_016693597             285 aa            linear   PLN 06-AUG-2024
DEFINITION  N-acylphosphatidylethanolamine synthase isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693597
VERSION     XP_016693597.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838108.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="N-acylphosphatidylethanolamine synthase isoform
                     X1"
                     /calculated_mol_wt=31909
     Region          56..225
                     /region_name="LPLAT_AGPAT-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: AGPAT-like; cd07989"
                     /db_xref="CDD:153251"
     Site            order(67,70,72,94..97,148..150)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153251"
     CDS             1..285
                     /gene="LOC107910299"
                     /coded_by="XM_016838108.2:237..1094"
                     /db_xref="GeneID:107910299"
ORIGIN      
        1 mgrkmewagk ekhmrgiprk lvflavgafa kavatllntt svhnadtlir lvrsrppgip
       61 lltvsnhmst lddpllwgfk gfpsldanla rwvlsaedic fknyaltyff rlgkcipitr
      121 gagiyqehmn ealqclnnga wlhtfpegkv sqedapirrl kwgtaslivr ghvtpivlpm
      181 vhsgfeevmp ekffldrrpp fplcnkkiki migqplefdi pkmrqvaisk srgdhlfsst
      241 tsrgwpviss hgldldeaaq rclystisqq iqtvmeelrs lakss
//
LOCUS       XP_016693598             247 aa            linear   PLN 06-AUG-2024
DEFINITION  N-acylphosphatidylethanolamine synthase isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693598
VERSION     XP_016693598.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..247
                     /product="N-acylphosphatidylethanolamine synthase isoform
                     X2"
                     /calculated_mol_wt=27325
     Region          56..>188
                     /region_name="LPLAT_AGPAT-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: AGPAT-like; cd07989"
                     /db_xref="CDD:153251"
     Site            order(67,70,72,94..97,148..150)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153251"
     CDS             1..247
                     /gene="LOC107910299"
                     /coded_by="XM_016838109.2:271..1014"
                     /db_xref="GeneID:107910299"
ORIGIN      
        1 mgrkmewagk ekhmrgiprk lvflavgafa kavatllntt svhnadtlir lvrsrppgip
       61 lltvsnhmst lddpllwgfk gfpsldanla rwvlsaedic fknyaltyff rlgkcipitr
      121 gagiyqehmn ealqclnnga wlhtfpegkv sqedapirrl kwgtaslivr ghvtpivlpm
      181 vhsgfeevai sksrgdhlfs sttsrgwpvi sshgldldea aqrclystis qqiqtvmeel
      241 rslakss
//
LOCUS       XP_016693599             611 aa            linear   PLN 06-AUG-2024
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 1A [Gossypium hirsutum].
ACCESSION   XP_016693599
VERSION     XP_016693599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..611
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 1A"
                     /calculated_mol_wt=68404
     Region          25..452
                     /region_name="Ribophorin_I"
                     /note="Ribophorin I; pfam04597"
                     /db_xref="CDD:428028"
     CDS             1..611
                     /gene="LOC107910300"
                     /coded_by="XM_016838110.2:150..1985"
                     /db_xref="GeneID:107910300"
ORIGIN      
        1 mesfgfcflm ltiailaspa lsdlvlskvd rriyltshiv risstmkven agsekeskvl
       61 lafpeqqakn mayliatphe gkgkgknpvv vlpveaanpk dmpaaltfys vslpkglaeg
      121 dsftfdvlav fthalrpipe qitqadiqlv lyqdsahyls pyavkvqsls vklpdsries
      181 ytklentkih gseikygpye nipsfsyspi avhfesnlpf avahelvrei eishwgnvqv
      241 tehyklihgg aqskgefsrl dfqarpnvrg asafrylvan lpprahsvyy rdeignists
      301 hlrgdskkte llieprypmf ggwrtaftig yglplldflf esdgkrflni tfsspmvelv
      361 idalivkvvl pegstdisva apfpveqwqe tkishldidg rpvvvlkktn vvpehnqffq
      421 vyyhfsqlsm lreplmlisg fffffvaciv ymhadisisk ssasylakqq weevqaviqq
      481 vqniisrclt thdnleaslr dlsrtgniqa ckaarkaadg llkelskelk plltflqssp
      541 saaqvlpkve elvakerelq ekvmvkhstv vdgyekklga rdienrvalq qqkltalrqe
      601 vddllefide i
//
LOCUS       XP_016691019             140 aa            linear   PLN 06-AUG-2024
DEFINITION  V-type proton ATPase subunit G1 [Gossypium hirsutum].
ACCESSION   XP_016691019
VERSION     XP_016691019.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835530.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691019.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..140
                     /product="V-type proton ATPase subunit G1"
                     /calculated_mol_wt=15824
     Region          36..139
                     /region_name="V-ATPase_G"
                     /note="Vacuolar (H+)-ATPase G subunit; pfam03179"
                     /db_xref="CDD:460836"
     CDS             1..140
                     /gene="LOC107908343"
                     /coded_by="XM_016835530.2:108..530"
                     /db_xref="GeneID:107908343"
ORIGIN      
        1 mleylrcwyq iinqccfqki sedivglvat mdsfkgqggi qmlltaeqea qhivssarnl
       61 kmarlkqake eaekdvalfr sqmeaeyqnk isessgssdn tvkrleeetd krikaltkst
      121 smvskeiiem lmkhvtsvki
//
LOCUS       XP_040944621            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944621
VERSION     XP_040944621.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088687.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1228
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /calculated_mol_wt=135649
     Region          200..242
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1077..1224
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1118,1144..1149,1163..1168,1176..1178,
                     1187,1203..1208,1210..1213)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1144,1164..1168,1205,1210..1213)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1170,1211,1213,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1228
                     /gene="LOC107948222"
                     /coded_by="XM_041088687.1:416..4102"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mglpmvssts pideydhpnf srkrlkvsdl sadfassnrg deqsatemsc qsngnssgis
       61 qscngggssc dksyssyaps sssyvsgwmy vnehgqmcgp yiqqqlyegl stgflpdelp
      121 vypvvngali npvplkyfrq fpdhvatgfi yltsptasny lkssftnvqh tpspspsqfn
      181 cnvsseafsf vlqsgedecw lfeddesrkh gphsllqlys whrcgylads imiyhaddrf
      241 rptqllsvln awkggqcvae neqelsvnfi saiseevssd lhsrimkaar rvmldeiist
      301 misefvaakk sqrplmvesy nqdakssdgk likntmersi hctskfgtat sdgvsnfsiq
      361 esthfdaslk svgslenfwg sytvvckmlf eycmqvtwna vfydsmveyl sswrkgklwy
      421 gqpnvlasas gsighgkete nikattlfsr melmaydies ppgyelatvs vgnqaeetyi
      481 sqsavqeils kqnsplhhsg lyggiqcile gvenelhssv mvfmadyldg lvkseakivi
      541 dlendqklne tpdeeaaeks vclsvddelk elqdtvgssn qchlasevdn sddseekknv
      601 snrmsdlscn lqnsvqskkp vcqsisenny asrqetfmae afkrlfgkvg dvinerevne
      661 ppppglevks gtlvpshnck frpltsvgcs pkigeyvama mcrqklhddv lrewkssfag
      721 daslyqflis rssskkhcka dgkeaktfse drknlagfsa srdkprdgsr kslssgssdi
      781 slvtgtctyy rkkklvhkkv gsslstiing srdqpverpr tkgpsknlld hadqklsaat
      841 skkggtnksm sqssnisrss kiiaknslpn dhslpksaig rktskdaaaa vrknligega
      901 ikvgrerast fqncdvekia rksnhtvgse gevtndsskk tlkakkvsgv krkqlnydec
      961 pspsikvqkv ascgskssss rgvadqksrt vrsrtanpcp rsdgcartsi ngwewhkwsl
     1021 naspaerarv rgvqciqmky sgpevnsmth lsnskglsar tnrvklrnll aavegadllk
     1081 atqlkarkkr lrfqrskihd wglvalepie aedfvieyvg elirprisdi rehyyekmgi
     1141 gssylfrldd gyvvdatkrg giarfinhsc epncytkvis vegqkkifiy akrhiaagee
     1201 vtynykfple ekkipcncgs kkcrgsln
//
LOCUS       XP_040944622            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944622
VERSION     XP_040944622.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088688.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1228
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /calculated_mol_wt=135649
     Region          200..242
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1077..1224
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1118,1144..1149,1163..1168,1176..1178,
                     1187,1203..1208,1210..1213)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1144,1164..1168,1205,1210..1213)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1170,1211,1213,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1228
                     /gene="LOC107948222"
                     /coded_by="XM_041088688.1:416..4102"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mglpmvssts pideydhpnf srkrlkvsdl sadfassnrg deqsatemsc qsngnssgis
       61 qscngggssc dksyssyaps sssyvsgwmy vnehgqmcgp yiqqqlyegl stgflpdelp
      121 vypvvngali npvplkyfrq fpdhvatgfi yltsptasny lkssftnvqh tpspspsqfn
      181 cnvsseafsf vlqsgedecw lfeddesrkh gphsllqlys whrcgylads imiyhaddrf
      241 rptqllsvln awkggqcvae neqelsvnfi saiseevssd lhsrimkaar rvmldeiist
      301 misefvaakk sqrplmvesy nqdakssdgk likntmersi hctskfgtat sdgvsnfsiq
      361 esthfdaslk svgslenfwg sytvvckmlf eycmqvtwna vfydsmveyl sswrkgklwy
      421 gqpnvlasas gsighgkete nikattlfsr melmaydies ppgyelatvs vgnqaeetyi
      481 sqsavqeils kqnsplhhsg lyggiqcile gvenelhssv mvfmadyldg lvkseakivi
      541 dlendqklne tpdeeaaeks vclsvddelk elqdtvgssn qchlasevdn sddseekknv
      601 snrmsdlscn lqnsvqskkp vcqsisenny asrqetfmae afkrlfgkvg dvinerevne
      661 ppppglevks gtlvpshnck frpltsvgcs pkigeyvama mcrqklhddv lrewkssfag
      721 daslyqflis rssskkhcka dgkeaktfse drknlagfsa srdkprdgsr kslssgssdi
      781 slvtgtctyy rkkklvhkkv gsslstiing srdqpverpr tkgpsknlld hadqklsaat
      841 skkggtnksm sqssnisrss kiiaknslpn dhslpksaig rktskdaaaa vrknligega
      901 ikvgrerast fqncdvekia rksnhtvgse gevtndsskk tlkakkvsgv krkqlnydec
      961 pspsikvqkv ascgskssss rgvadqksrt vrsrtanpcp rsdgcartsi ngwewhkwsl
     1021 naspaerarv rgvqciqmky sgpevnsmth lsnskglsar tnrvklrnll aavegadllk
     1081 atqlkarkkr lrfqrskihd wglvalepie aedfvieyvg elirprisdi rehyyekmgi
     1141 gssylfrldd gyvvdatkrg giarfinhsc epncytkvis vegqkkifiy akrhiaagee
     1201 vtynykfple ekkipcncgs kkcrgsln
//
LOCUS       XP_040944623            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944623
VERSION     XP_040944623.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088689.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1228
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /calculated_mol_wt=135649
     Region          200..242
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1077..1224
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1118,1144..1149,1163..1168,1176..1178,
                     1187,1203..1208,1210..1213)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1144,1164..1168,1205,1210..1213)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1170,1211,1213,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1228
                     /gene="LOC107948222"
                     /coded_by="XM_041088689.1:417..4103"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mglpmvssts pideydhpnf srkrlkvsdl sadfassnrg deqsatemsc qsngnssgis
       61 qscngggssc dksyssyaps sssyvsgwmy vnehgqmcgp yiqqqlyegl stgflpdelp
      121 vypvvngali npvplkyfrq fpdhvatgfi yltsptasny lkssftnvqh tpspspsqfn
      181 cnvsseafsf vlqsgedecw lfeddesrkh gphsllqlys whrcgylads imiyhaddrf
      241 rptqllsvln awkggqcvae neqelsvnfi saiseevssd lhsrimkaar rvmldeiist
      301 misefvaakk sqrplmvesy nqdakssdgk likntmersi hctskfgtat sdgvsnfsiq
      361 esthfdaslk svgslenfwg sytvvckmlf eycmqvtwna vfydsmveyl sswrkgklwy
      421 gqpnvlasas gsighgkete nikattlfsr melmaydies ppgyelatvs vgnqaeetyi
      481 sqsavqeils kqnsplhhsg lyggiqcile gvenelhssv mvfmadyldg lvkseakivi
      541 dlendqklne tpdeeaaeks vclsvddelk elqdtvgssn qchlasevdn sddseekknv
      601 snrmsdlscn lqnsvqskkp vcqsisenny asrqetfmae afkrlfgkvg dvinerevne
      661 ppppglevks gtlvpshnck frpltsvgcs pkigeyvama mcrqklhddv lrewkssfag
      721 daslyqflis rssskkhcka dgkeaktfse drknlagfsa srdkprdgsr kslssgssdi
      781 slvtgtctyy rkkklvhkkv gsslstiing srdqpverpr tkgpsknlld hadqklsaat
      841 skkggtnksm sqssnisrss kiiaknslpn dhslpksaig rktskdaaaa vrknligega
      901 ikvgrerast fqncdvekia rksnhtvgse gevtndsskk tlkakkvsgv krkqlnydec
      961 pspsikvqkv ascgskssss rgvadqksrt vrsrtanpcp rsdgcartsi ngwewhkwsl
     1021 naspaerarv rgvqciqmky sgpevnsmth lsnskglsar tnrvklrnll aavegadllk
     1081 atqlkarkkr lrfqrskihd wglvalepie aedfvieyvg elirprisdi rehyyekmgi
     1141 gssylfrldd gyvvdatkrg giarfinhsc epncytkvis vegqkkifiy akrhiaagee
     1201 vtynykfple ekkipcncgs kkcrgsln
//
LOCUS       XP_040944624            1228 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944624
VERSION     XP_040944624.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088690.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1228
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X1"
                     /calculated_mol_wt=135649
     Region          200..242
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1077..1224
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1118,1144..1149,1163..1168,1176..1178,
                     1187,1203..1208,1210..1213)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1098..1101,1144,1164..1168,1205,1210..1213)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1170,1211,1213,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1228
                     /gene="LOC107948222"
                     /coded_by="XM_041088690.1:417..4103"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mglpmvssts pideydhpnf srkrlkvsdl sadfassnrg deqsatemsc qsngnssgis
       61 qscngggssc dksyssyaps sssyvsgwmy vnehgqmcgp yiqqqlyegl stgflpdelp
      121 vypvvngali npvplkyfrq fpdhvatgfi yltsptasny lkssftnvqh tpspspsqfn
      181 cnvsseafsf vlqsgedecw lfeddesrkh gphsllqlys whrcgylads imiyhaddrf
      241 rptqllsvln awkggqcvae neqelsvnfi saiseevssd lhsrimkaar rvmldeiist
      301 misefvaakk sqrplmvesy nqdakssdgk likntmersi hctskfgtat sdgvsnfsiq
      361 esthfdaslk svgslenfwg sytvvckmlf eycmqvtwna vfydsmveyl sswrkgklwy
      421 gqpnvlasas gsighgkete nikattlfsr melmaydies ppgyelatvs vgnqaeetyi
      481 sqsavqeils kqnsplhhsg lyggiqcile gvenelhssv mvfmadyldg lvkseakivi
      541 dlendqklne tpdeeaaeks vclsvddelk elqdtvgssn qchlasevdn sddseekknv
      601 snrmsdlscn lqnsvqskkp vcqsisenny asrqetfmae afkrlfgkvg dvinerevne
      661 ppppglevks gtlvpshnck frpltsvgcs pkigeyvama mcrqklhddv lrewkssfag
      721 daslyqflis rssskkhcka dgkeaktfse drknlagfsa srdkprdgsr kslssgssdi
      781 slvtgtctyy rkkklvhkkv gsslstiing srdqpverpr tkgpsknlld hadqklsaat
      841 skkggtnksm sqssnisrss kiiaknslpn dhslpksaig rktskdaaaa vrknligega
      901 ikvgrerast fqncdvekia rksnhtvgse gevtndsskk tlkakkvsgv krkqlnydec
      961 pspsikvqkv ascgskssss rgvadqksrt vrsrtanpcp rsdgcartsi ngwewhkwsl
     1021 naspaerarv rgvqciqmky sgpevnsmth lsnskglsar tnrvklrnll aavegadllk
     1081 atqlkarkkr lrfqrskihd wglvalepie aedfvieyvg elirprisdi rehyyekmgi
     1141 gssylfrldd gyvvdatkrg giarfinhsc epncytkvis vegqkkifiy akrhiaagee
     1201 vtynykfple ekkipcncgs kkcrgsln
//
LOCUS       XP_040944625            1224 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944625
VERSION     XP_040944625.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088691.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1224
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X2"
                     /calculated_mol_wt=135251
     Region          196..238
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1073..1220
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1094..1097,1114,1140..1145,1159..1164,1172..1174,
                     1183,1199..1204,1206..1209)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1094..1097,1140,1160..1164,1201,1206..1209)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1166,1207,1209,1214)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1224
                     /gene="LOC107948222"
                     /coded_by="XM_041088691.1:451..4125"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mvsstspide ydhpnfsrkr lkvsdlsadf assnrgdeqs atemscqsng nssgisqscn
       61 gggsscdksy ssyapssssy vsgwmyvneh gqmcgpyiqq qlyeglstgf lpdelpvypv
      121 vngalinpvp lkyfrqfpdh vatgfiylts ptasnylkss ftnvqhtpsp spsqfncnvs
      181 seafsfvlqs gedecwlfed desrkhgphs llqlyswhrc gyladsimiy haddrfrptq
      241 llsvlnawkg gqcvaeneqe lsvnfisais eevssdlhsr imkaarrvml deiistmise
      301 fvaakksqrp lmvesynqda kssdgklikn tmersihcts kfgtatsdgv snfsiqesth
      361 fdaslksvgs lenfwgsytv vckmlfeycm qvtwnavfyd smveylsswr kgklwygqpn
      421 vlasasgsig hgketenika ttlfsrmelm aydiesppgy elatvsvgnq aeetyisqsa
      481 vqeilskqns plhhsglygg iqcilegven elhssvmvfm adyldglvks eakividlen
      541 dqklnetpde eaaeksvcls vddelkelqd tvgssnqchl asevdnsdds eekknvsnrm
      601 sdlscnlqns vqskkpvcqs isennyasrq etfmaeafkr lfgkvgdvin erevnepppp
      661 glevksgtlv pshnckfrpl tsvgcspkig eyvamamcrq klhddvlrew kssfagdasl
      721 yqflisrsss kkhckadgke aktfsedrkn lagfsasrdk prdgsrksls sgssdislvt
      781 gtctyyrkkk lvhkkvgssl stiingsrdq pverprtkgp sknlldhadq klsaatskkg
      841 gtnksmsqss nisrsskiia knslpndhsl pksaigrkts kdaaaavrkn ligegaikvg
      901 rerastfqnc dvekiarksn htvgsegevt ndsskktlka kkvsgvkrkq lnydecpsps
      961 ikvqkvascg skssssrgva dqksrtvrsr tanpcprsdg cartsingwe whkwslnasp
     1021 aerarvrgvq ciqmkysgpe vnsmthlsns kglsartnrv klrnllaave gadllkatql
     1081 karkkrlrfq rskihdwglv alepieaedf vieyvgelir prisdirehy yekmgigssy
     1141 lfrlddgyvv datkrggiar finhscepnc ytkvisvegq kkifiyakrh iaageevtyn
     1201 ykfpleekki pcncgskkcr gsln
//
LOCUS       XP_040944626            1224 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944626
VERSION     XP_040944626.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088692.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1224
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X2"
                     /calculated_mol_wt=135251
     Region          196..238
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1073..1220
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1094..1097,1114,1140..1145,1159..1164,1172..1174,
                     1183,1199..1204,1206..1209)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1094..1097,1140,1160..1164,1201,1206..1209)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1166,1207,1209,1214)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1224
                     /gene="LOC107948222"
                     /coded_by="XM_041088692.1:456..4130"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mvsstspide ydhpnfsrkr lkvsdlsadf assnrgdeqs atemscqsng nssgisqscn
       61 gggsscdksy ssyapssssy vsgwmyvneh gqmcgpyiqq qlyeglstgf lpdelpvypv
      121 vngalinpvp lkyfrqfpdh vatgfiylts ptasnylkss ftnvqhtpsp spsqfncnvs
      181 seafsfvlqs gedecwlfed desrkhgphs llqlyswhrc gyladsimiy haddrfrptq
      241 llsvlnawkg gqcvaeneqe lsvnfisais eevssdlhsr imkaarrvml deiistmise
      301 fvaakksqrp lmvesynqda kssdgklikn tmersihcts kfgtatsdgv snfsiqesth
      361 fdaslksvgs lenfwgsytv vckmlfeycm qvtwnavfyd smveylsswr kgklwygqpn
      421 vlasasgsig hgketenika ttlfsrmelm aydiesppgy elatvsvgnq aeetyisqsa
      481 vqeilskqns plhhsglygg iqcilegven elhssvmvfm adyldglvks eakividlen
      541 dqklnetpde eaaeksvcls vddelkelqd tvgssnqchl asevdnsdds eekknvsnrm
      601 sdlscnlqns vqskkpvcqs isennyasrq etfmaeafkr lfgkvgdvin erevnepppp
      661 glevksgtlv pshnckfrpl tsvgcspkig eyvamamcrq klhddvlrew kssfagdasl
      721 yqflisrsss kkhckadgke aktfsedrkn lagfsasrdk prdgsrksls sgssdislvt
      781 gtctyyrkkk lvhkkvgssl stiingsrdq pverprtkgp sknlldhadq klsaatskkg
      841 gtnksmsqss nisrsskiia knslpndhsl pksaigrkts kdaaaavrkn ligegaikvg
      901 rerastfqnc dvekiarksn htvgsegevt ndsskktlka kkvsgvkrkq lnydecpsps
      961 ikvqkvascg skssssrgva dqksrtvrsr tanpcprsdg cartsingwe whkwslnasp
     1021 aerarvrgvq ciqmkysgpe vnsmthlsns kglsartnrv klrnllaave gadllkatql
     1081 karkkrlrfq rskihdwglv alepieaedf vieyvgelir prisdirehy yekmgigssy
     1141 lfrlddgyvv datkrggiar finhscepnc ytkvisvegq kkifiyakrh iaageevtyn
     1201 ykfpleekki pcncgskkcr gsln
//
LOCUS       XP_040944628            1217 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944628
VERSION     XP_040944628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088694.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1217
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X3"
                     /calculated_mol_wt=134454
     Region          189..231
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1066..1213
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1087..1090,1107,1133..1138,1152..1157,1165..1167,
                     1176,1192..1197,1199..1202)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1087..1090,1133,1153..1157,1194,1199..1202)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1159,1200,1202,1207)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1217
                     /gene="LOC107948222"
                     /coded_by="XM_041088694.1:415..4068"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mglpmvssts pideydhpnf srkrlkvsdl sadfassnrg deqsatemsc qsngnssgis
       61 qscngggssc dksyssyaps sssyvsgwmy vnehgqmcgp yiqqqlyegl stgflpdelp
      121 vypvvngali npvplkyfrq fpdhvatgfi yltsptasny lkssftnvqh tpspspsqfn
      181 cnsgedecwl feddesrkhg phsllqlysw hrcgyladsi miyhaddrfr ptqllsvlna
      241 wkggqcvaen eqelsvnfis aiseevssdl hsrimkaarr vmldeiistm isefvaakks
      301 qrplmvesyn qdakssdgkl ikntmersih ctskfgtats dgvsnfsiqe sthfdaslks
      361 vgslenfwgs ytvvckmlfe ycmqvtwnav fydsmveyls swrkgklwyg qpnvlasasg
      421 sighgketen ikattlfsrm elmaydiesp pgyelatvsv gnqaeetyis qsavqeilsk
      481 qnsplhhsgl yggiqcileg venelhssvm vfmadyldgl vkseakivid lendqklnet
      541 pdeeaaeksv clsvddelke lqdtvgssnq chlasevdns ddseekknvs nrmsdlscnl
      601 qnsvqskkpv cqsisennya srqetfmaea fkrlfgkvgd vinerevnep pppglevksg
      661 tlvpshnckf rpltsvgcsp kigeyvamam crqklhddvl rewkssfagd aslyqflisr
      721 ssskkhckad gkeaktfsed rknlagfsas rdkprdgsrk slssgssdis lvtgtctyyr
      781 kkklvhkkvg sslstiings rdqpverprt kgpsknlldh adqklsaats kkggtnksms
      841 qssnisrssk iiaknslpnd hslpksaigr ktskdaaaav rknligegai kvgrerastf
      901 qncdvekiar ksnhtvgseg evtndsskkt lkakkvsgvk rkqlnydecp spsikvqkva
      961 scgskssssr gvadqksrtv rsrtanpcpr sdgcartsin gwewhkwsln aspaerarvr
     1021 gvqciqmkys gpevnsmthl snskglsart nrvklrnlla avegadllka tqlkarkkrl
     1081 rfqrskihdw glvalepiea edfvieyvge lirprisdir ehyyekmgig ssylfrlddg
     1141 yvvdatkrgg iarfinhsce pncytkvisv egqkkifiya krhiaageev tynykfplee
     1201 kkipcncgsk kcrgsln
//
LOCUS       XP_040944629            1150 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase ATXR7 isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040944629
VERSION     XP_040944629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088695.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1150
                     /product="histone-lysine N-methyltransferase ATXR7 isoform
                     X4"
                     /calculated_mol_wt=126961
     Region          200..242
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Region          1077..>1127
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     CDS             1..1150
                     /gene="LOC107948222"
                     /coded_by="XM_041088695.1:419..3871"
                     /db_xref="GeneID:107948222"
ORIGIN      
        1 mglpmvssts pideydhpnf srkrlkvsdl sadfassnrg deqsatemsc qsngnssgis
       61 qscngggssc dksyssyaps sssyvsgwmy vnehgqmcgp yiqqqlyegl stgflpdelp
      121 vypvvngali npvplkyfrq fpdhvatgfi yltsptasny lkssftnvqh tpspspsqfn
      181 cnvsseafsf vlqsgedecw lfeddesrkh gphsllqlys whrcgylads imiyhaddrf
      241 rptqllsvln awkggqcvae neqelsvnfi saiseevssd lhsrimkaar rvmldeiist
      301 misefvaakk sqrplmvesy nqdakssdgk likntmersi hctskfgtat sdgvsnfsiq
      361 esthfdaslk svgslenfwg sytvvckmlf eycmqvtwna vfydsmveyl sswrkgklwy
      421 gqpnvlasas gsighgkete nikattlfsr melmaydies ppgyelatvs vgnqaeetyi
      481 sqsavqeils kqnsplhhsg lyggiqcile gvenelhssv mvfmadyldg lvkseakivi
      541 dlendqklne tpdeeaaeks vclsvddelk elqdtvgssn qchlasevdn sddseekknv
      601 snrmsdlscn lqnsvqskkp vcqsisenny asrqetfmae afkrlfgkvg dvinerevne
      661 ppppglevks gtlvpshnck frpltsvgcs pkigeyvama mcrqklhddv lrewkssfag
      721 daslyqflis rssskkhcka dgkeaktfse drknlagfsa srdkprdgsr kslssgssdi
      781 slvtgtctyy rkkklvhkkv gsslstiing srdqpverpr tkgpsknlld hadqklsaat
      841 skkggtnksm sqssnisrss kiiaknslpn dhslpksaig rktskdaaaa vrknligega
      901 ikvgrerast fqncdvekia rksnhtvgse gevtndsskk tlkakkvsgv krkqlnydec
      961 pspsikvqkv ascgskssss rgvadqksrt vrsrtanpcp rsdgcartsi ngwewhkwsl
     1021 naspaerarv rgvqciqmky sgpevnsmth lsnskglsar tnrvklrnll aavegadllk
     1081 atqlkarkkr lrfqrskihd wglvalepie aedfvieyvg elirpriyvn timrrwelva
     1141 vifldlmmdm
//
LOCUS       XP_016738185             616 aa            linear   PLN 06-AUG-2024
DEFINITION  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit
            alpha isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016738185
VERSION     XP_016738185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016882696.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="pyrophosphate--fructose 6-phosphate
                     1-phosphotransferase subunit alpha isoform X1"
                     /calculated_mol_wt=67339
     Region          8..606
                     /region_name="PLN03028"
                     /note="pyrophosphate--fructose-6-phosphate
                     1-phosphotransferase; Provisional"
                     /db_xref="CDD:215543"
     Site            order(96,128,160,190..192,194..195,218,220,222,265..267,
                     326,430,433)
                     /site_type="active"
                     /db_xref="CDD:238216"
     Site            order(96,128,160,190..192,194..195)
                     /site_type="other"
                     /note="ADP/pyrophosphate binding site [chemical binding]"
                     /db_xref="CDD:238216"
     Site            order(106,110,141,146,149,230,242,246,249,278..279,281,
                     317,442..443,447,454,469,524)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238216"
     Site            order(106,110,141..142,145..146,249,281,283,315,317..319)
                     /site_type="active"
                     /note="allosteric effector site [active]"
                     /db_xref="CDD:238216"
     Site            order(218,220,222,258,265..267,326,424,430,433)
                     /site_type="other"
                     /note="fructose-1,6-bisphosphate binding site"
                     /db_xref="CDD:238216"
     CDS             1..616
                     /gene="LOC107948223"
                     /coded_by="XM_016882696.2:445..2295"
                     /db_xref="GeneID:107948223"
ORIGIN      
        1 mdsdygipre lsdlqklrsq yqprlppcle gttvrvefgd tttsldpada htiarafpht
       61 ygkplahflr atakvpdaqi itehptirvg lvfcgrqspa ghnvvwglhk alkihnpnst
      121 llgflggtqg lfaqktleit ddilstyknq ggydllgrtq dqirtteqvk aalaacndlk
      181 ldglviiggv tsntdaaqla etfaeakcpt mvvgvpvtln gdlknqfvet nvgfdtickv
      241 nsqlisnvct dalsaekyyy firlmgrkas hvalectlqs hpnmvilgee vaaskltlfd
      301 itkqicdavq araeqdknhg villpeglie sipevyallk eihsllrqnv sadkissqls
      361 pwasalfefl phfirkqlll qpesddsaql sqieteklla hlveneinkr lkagtykgkk
      421 fnaichffgy qargslpskf dcdyayvlgh icyhilaagl ngymatitnl knpvnkwrcg
      481 aaplpammtv krwsqnpnaa sigkpaihpa tvdlkgkaye mlrqnaarfl lddiyrnpgp
      541 lqfdgpgada kavtlcvedq dymgrikklq eyldkvrtiv kpgcsqevlk aalsvmasvt
      601 evlsvmssss sggqal
//
LOCUS       XP_016738186             579 aa            linear   PLN 06-AUG-2024
DEFINITION  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit
            alpha isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016738186
VERSION     XP_016738186.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016882697.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..579
                     /product="pyrophosphate--fructose 6-phosphate
                     1-phosphotransferase subunit alpha isoform X2"
                     /calculated_mol_wt=63608
     Region          8..575
                     /region_name="PLN03028"
                     /note="pyrophosphate--fructose-6-phosphate
                     1-phosphotransferase; Provisional"
                     /db_xref="CDD:215543"
     Site            order(96,128,160,190..192,194..195,218,220,222,265..267,
                     326,430,433)
                     /site_type="active"
                     /db_xref="CDD:238216"
     Site            order(96,128,160,190..192,194..195)
                     /site_type="other"
                     /note="ADP/pyrophosphate binding site [chemical binding]"
                     /db_xref="CDD:238216"
     Site            order(106,110,141,146,149,230,242,246,249,278..279,281,
                     317,442..443,447,454,469,524)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238216"
     Site            order(106,110,141..142,145..146,249,281,283,315,317..319)
                     /site_type="active"
                     /note="allosteric effector site [active]"
                     /db_xref="CDD:238216"
     Site            order(218,220,222,258,265..267,326,424,430,433)
                     /site_type="other"
                     /note="fructose-1,6-bisphosphate binding site"
                     /db_xref="CDD:238216"
     CDS             1..579
                     /gene="LOC107948223"
                     /coded_by="XM_016882697.2:393..2132"
                     /db_xref="GeneID:107948223"
ORIGIN      
        1 mdsdygipre lsdlqklrsq yqprlppcle gttvrvefgd tttsldpada htiarafpht
       61 ygkplahflr atakvpdaqi itehptirvg lvfcgrqspa ghnvvwglhk alkihnpnst
      121 llgflggtqg lfaqktleit ddilstyknq ggydllgrtq dqirtteqvk aalaacndlk
      181 ldglviiggv tsntdaaqla etfaeakcpt mvvgvpvtln gdlknqfvet nvgfdtickv
      241 nsqlisnvct dalsaekyyy firlmgrkas hvalectlqs hpnmvilgee vaaskltlfd
      301 itkqicdavq araeqdknhg villpeglie sipevyallk eihsllrqnv sadkissqls
      361 pwasalfefl phfirkqlll qpesddsaql sqieteklla hlveneinkr lkagtykgkk
      421 fnaichffgy qargslpskf dcdyayvlgh icyhilaagl ngymatitnl knpvnkwrcg
      481 aaplpammtv krwsqnpnaa sigkpaihpa tvdlkgkaye mlrqnaarfl lddiyrnpgp
      541 lqfdgpgada kavtlcvedq dymgrikklq eyldksvca
//
LOCUS       XP_016694224             524 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inorganic phosphate transporter 1-9 [Gossypium hirsutum].
ACCESSION   XP_016694224
VERSION     XP_016694224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838735.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..524
                     /product="probable inorganic phosphate transporter 1-9"
                     /calculated_mol_wt=57989
     Region          8..512
                     /region_name="2A0109"
                     /note="phosphate:H+ symporter; TIGR00887"
                     /db_xref="CDD:129965"
     CDS             1..524
                     /gene="LOC107910754"
                     /coded_by="XM_016838735.2:384..1958"
                     /db_xref="GeneID:107910754"
ORIGIN      
        1 malkllsald aakiqlyhfk aiiiagmglf tdaydlfcip pimkligriy yldhhnsdkc
       61 svmpketqyk ttptavvstl vsiallgtav gqlvfgrlgd ragrrrvygl slgmmvlssl
      121 acgfsicktr ncvlvslgff rfllgvgigg dyplsatims efankktrga flaavfsmqg
      181 lgilassivt mvvcrifavs snepksetpd eadlawrvil mmgavpaalt yywrmmmpet
      241 arytalveqn vvqaaidmkk vldvpmseia edspirlkpp vlphpsypll skrflrrhgv
      301 dlfccaatwf lvdvvfyssn llqsqiyhrf ikdnndvngy klafkvarfq ailaisstip
      361 gywvtvyfid rigrvkiqml gflfmalvyf aigipykyyw senisvgfma lyslsfffsn
      421 fgpntttfiv paelfparfr stchgiagav gkvgaiigti gffsasrnek dsgkpnpvrm
      481 tvalvilgvv clvgllltyf ltrettgrsl edneiyedel iynt
//
LOCUS       XP_016694014             908 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol-3-phosphatase SAC1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694014
VERSION     XP_016694014.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838525.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694014.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..908
                     /product="phosphatidylinositol-3-phosphatase SAC1 isoform
                     X1"
                     /calculated_mol_wt=102486
     Region          108..406
                     /region_name="Syja_N"
                     /note="SacI homology domain; pfam02383"
                     /db_xref="CDD:460545"
     CDS             1..908
                     /gene="LOC107910619"
                     /coded_by="XM_016838525.2:117..2843"
                     /db_xref="GeneID:107910619"
ORIGIN      
        1 maklenlktn lslpyakihp sidpegdpns yslekfrlye traryyligs drnkkffrvl
       61 kidrsepsdl nisedpvlys pqeiknllqr iaegnratgg lnfvakvfgi vgcikflesy
      121 ylilvtkrqq igsicghaiy sidesqlitv phvsvqsdia hsktelrykk llssvdltkd
      181 ffysytypim qslqknvlam geermpydni fvwnayltqa irsrcsntiw tialvhghfk
      241 qirlsifgrd fsvtlvsrrs rhfagtrylk rgvndrgrva ndveteqiil deeagsckgk
      301 mssvvqmrgs iplfwsqeas rfspkpdiil qrydptyqat klhfedlakr ygnpiivlnl
      361 iktvekrpre mmlrrefaha vgylnailse enqlkfihwd fhkfaksksa nvlavlgava
      421 sealdltcfy ysgkpslvkk ranqlnrtst grdaslrdlr gksgdlvkig sgsensnslt
      481 sreregdlsq qiktdncdgd pprfqsgvlr tncidcldrt nvaqyaygla algrqlhamg
      541 ltdkpkvdpd ssiaaalmdm yqsmgdalaq qyggsaahnt vfperqgkwk attqsreflk
      601 sikryysnay tdgekqdain lflgyfqpqe gkpalwelds dyylhvsgtg ddlfpdkcve
      661 dnvkplrvvg kilapipscr edfsrmklts fdkliertcs siknvrlcse pdqrtggpta
      721 nsgvapdaae iqlkspnwlf gqrkfeevgs gpkvsvreik nggangemkl ddfcdlnwls
      781 syvddeqdif qrylsmtsvd eangwyggtl lgdqdessei yrhyaelcqg lamepfqhdl
      841 erekhytdvl qmntidvvdd asveaemaea lkeydligad lgifpvscks ftedpsrltr
      901 wiigeekm
//
LOCUS       XP_016694015             863 aa            linear   PLN 06-AUG-2024
DEFINITION  phosphatidylinositol-3-phosphatase SAC1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694015
VERSION     XP_016694015.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694015.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..863
                     /product="phosphatidylinositol-3-phosphatase SAC1 isoform
                     X2"
                     /calculated_mol_wt=97773
     Region          108..406
                     /region_name="Syja_N"
                     /note="SacI homology domain; pfam02383"
                     /db_xref="CDD:460545"
     CDS             1..863
                     /gene="LOC107910619"
                     /coded_by="XM_016838526.2:118..2709"
                     /db_xref="GeneID:107910619"
ORIGIN      
        1 maklenlktn lslpyakihp sidpegdpns yslekfrlye traryyligs drnkkffrvl
       61 kidrsepsdl nisedpvlys pqeiknllqr iaegnratgg lnfvakvfgi vgcikflesy
      121 ylilvtkrqq igsicghaiy sidesqlitv phvsvqsdia hsktelrykk llssvdltkd
      181 ffysytypim qslqknvlam geermpydni fvwnayltqa irsrcsntiw tialvhghfk
      241 qirlsifgrd fsvtlvsrrs rhfagtrylk rgvndrgrva ndveteqiil deeagsckgk
      301 mssvvqmrgs iplfwsqeas rfspkpdiil qrydptyqat klhfedlakr ygnpiivlnl
      361 iktvekrpre mmlrrefaha vgylnailse enqlkfihwd fhkfakrdas lrdlrgksgd
      421 lvkigsgsen snsltsrere gdlsqqiktd ncdgdpprfq sgvlrtncid cldrtnvaqy
      481 ayglaalgrq lhamgltdkp kvdpdssiaa almdmyqsmg dalaqqyggs aahntvfper
      541 qgkwkattqs reflksikry ysnaytdgek qdainlflgy fqpqegkpal weldsdyylh
      601 vsgtgddlfp dkcvednvkp lrvvgkilap ipscredfsr mkltsfdkli ertcssiknv
      661 rlcsepdqrt ggptansgva pdaaeiqlks pnwlfgqrkf eevgsgpkvs vreiknggan
      721 gemklddfcd lnwlssyvdd eqdifqryls mtsvdeangw yggtllgdqd esseiyrhya
      781 elcqglamep fqhdlerekh ytdvlqmnti dvvddasvea emaealkeyd ligadlgifp
      841 vscksftedp srltrwiige ekm
//
LOCUS       XP_016694017             599 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 5.10 [Gossypium hirsutum].
ACCESSION   XP_016694017
VERSION     XP_016694017.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838528.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694017.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..599
                     /product="protein NRT1/ PTR FAMILY 5.10"
                     /calculated_mol_wt=65439
     Region          63..592
                     /region_name="MFS_NPF5"
                     /note="NRT1/PTR family (NPF), subfamily 5 of the Major
                     Facilitator Superfamily of transporters; cd17417"
                     /db_xref="CDD:340975"
     Site            order(76..77,80..81,84,117,192..193,195..197,200,226,
                     229..230,233,366,369..370,373..375,378,411,415,497..498,
                     502,506,522,525..526,529..530,533)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340975"
     CDS             1..599
                     /gene="LOC107910620"
                     /coded_by="XM_016838528.2:181..1980"
                     /db_xref="GeneID:107910620"
ORIGIN      
        1 mnydlllqsd hwlslnyskt firaismsis dpsaaqtpll ddtidgcldy kgrpvrrsss
       61 gcwisasfii vveiaerfay ygissnlity ltgplgesta taaaqvnawn gaasllpllg
      121 afiadsflgr yrtiilaslv yilglgllal satlgsisss ggqnaddial ssslqfqvil
      181 ffsslylvaf aqgghkpcvq afgadqfdtq dpeeckakss ffnwwyfgmc agtlttlsil
      241 nyiqdnlswv lgfaipgivm avglvvfllg tmtyrysvkg deespivtvg rvfilavrnr
      301 ktsysaiaae eeargilate sskqfkflnk allapdgske qgevcsirev eeakavirla
      361 piwatsliya iafaqsstff tkqgatmdrs tammgfeipa aslqsfisls vvlfipiydr
      421 ifvplaralt gkqagitllq rigsgmvist islviaavve mrrlkiaeey glldkpnvmv
      481 pmsvwwlvpq yalygladvf tmvglqeffy dqmpnelrsv glalylsifg vgsflssfli
      541 saienltsgd grdswfannl nrahldyffl llavlsavgl tlyvcctkyy iyarwgrtf
//
LOCUS       XP_016694020             399 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694020
VERSION     XP_016694020.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838531.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694020.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44267
     Region          223..385
                     /region_name="DUF179"
                     /note="Uncharacterized ACR, COG1678; pfam02622"
                     /db_xref="CDD:460624"
     CDS             1..399
                     /gene="LOC107910622"
                     /coded_by="XM_016838531.2:12..1211"
                     /db_xref="GeneID:107910622"
ORIGIN      
        1 misvsdfprh klplllngiv fppgrkklee keikllnfpl lkmdlwtvhv knantcnpaa
       61 glagalllkg nsiperpnsl migklgildi rvsrrclsss aarsftvkam tkknnddnss
      121 sssgngdqsi pneessgrnn spdgnksyds asqnshytdt dwrefravly knyqvektes
      181 gahkqgetph vlkplgkkwa hplsvpetgc vlvatekldg vrtfertvvv llrsgtrhpq
      241 egpfgvvinr pvhkkikhmk ptnnelattf aecalhfggp leasmfllrv gkklkfpgfe
      301 evipglcfga rnsldkaael vkrgvlksqd fkffvgyaew qldqlieeie seywyvaacs
      361 pnlifgdtld ssseslwmei lqemgghyse lsrkpkqdi
//
LOCUS       XP_040944631             221 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944631
VERSION     XP_040944631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088697.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=24530
     Region          142..197
                     /region_name="DUF565"
                     /note="Protein of unknown function (DUF565); pfam04483"
                     /db_xref="CDD:461326"
     CDS             1..221
                     /gene="LOC107910623"
                     /coded_by="XM_041088697.1:288..953"
                     /db_xref="GeneID:107910623"
ORIGIN      
        1 mnchfvgssq amttttrlsr nanfsifkls nssdaalnlg pcshknvcff gwklhsqpcf
       61 ihvnnfrkme wsvrsnvdas gfdpsscngg rprliraiqg iqtklgvriq elrknlpmki
      121 lfflvgfyca tafatfigqt gdwdilsaal avfvvegiga lmyraslpll nnvrnlitif
      181 nywkaglslg lfldsfkyel dkitgfsnpl sfdldvfalf v
//
LOCUS       XP_016694021             210 aa            linear   PLN 06-AUG-2024
DEFINITION  ycf20-like protein isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694021
VERSION     XP_016694021.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838532.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694021.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..210
                     /product="ycf20-like protein isoform X2"
                     /calculated_mol_wt=23367
     Region          131..186
                     /region_name="DUF565"
                     /note="Protein of unknown function (DUF565); pfam04483"
                     /db_xref="CDD:461326"
     CDS             1..210
                     /gene="LOC107910623"
                     /coded_by="XM_016838532.2:233..865"
                     /db_xref="GeneID:107910623"
ORIGIN      
        1 mttttrlsrn anfsifklsn ssdaalnlgp cshknvcffg wklhsqpcfi hvnnfrkmew
       61 svrsnvdasg fdpsscnggr prliraiqgi qtklgvriqe lrknlpmkil fflvgfycat
      121 afatfigqtg dwdilsaala vfvvegigal myraslplln nvrnlitifn ywkaglslgl
      181 fldsfkyeld kitgfsnpls fdldvfalfv
//
LOCUS       XP_040944632             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944632
VERSION     XP_040944632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088698.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=18415
     CDS             1..166
                     /gene="LOC107910623"
                     /coded_by="XM_041088698.1:155..655"
                     /db_xref="GeneID:107910623"
ORIGIN      
        1 mnchfvgssq amttttrlsr nanfsifkls nssdaalnlg pcshknvcff gwklhsqpcf
       61 ihvnnfrkme wsvrsnvdas gfdpsscngg rprliraiqg iqtklgvriq elrknlpmki
      121 lfflpaavti ccygnisciy hkkhntsesr lesmhgptpl vathaf
//
LOCUS       XP_040944633             155 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944633
VERSION     XP_040944633.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088699.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=17253
     CDS             1..155
                     /gene="LOC107910623"
                     /coded_by="XM_041088699.1:176..643"
                     /db_xref="GeneID:107910623"
ORIGIN      
        1 mttttrlsrn anfsifklsn ssdaalnlgp cshknvcffg wklhsqpcfi hvnnfrkmew
       61 svrsnvdasg fdpsscnggr prliraiqgi qtklgvriqe lrknlpmkil fflpaavtic
      121 cygnisciyh kkhntsesrl esmhgptplv athaf
//
LOCUS       XP_040944634             178 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF021 [Gossypium
            hirsutum].
ACCESSION   XP_040944634
VERSION     XP_040944634.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088700.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..178
                     /product="ethylene-responsive transcription factor ERF021"
                     /calculated_mol_wt=19623
     Region          16..73
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(18..19,21,23,25,27,31,33,40,42,45)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..178
                     /gene="LOC107908067"
                     /coded_by="XM_041088700.1:167..703"
                     /db_xref="GeneID:107908067"
ORIGIN      
        1 megknsssar aglpssyrgv rkrkwgkwvs eirepgkktr iwlgsfetpe maasaydvaa
       61 lqfrggearl nfpdlvsclp kpassnaedi rkaaheaasw vrtnavvpdt ggsssstgpv
      121 tvrlsqsqiq ainespmdsp kmwmqmseal mmdeammfcn enkenewedm qvdslwdt
//
LOCUS       XP_040944635             941 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944635
VERSION     XP_040944635.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088701.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..941
                     /product="phospholipase SGR2 isoform X1"
                     /calculated_mol_wt=107184
     Region          678..879
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..941
                     /gene="LOC107908069"
                     /coded_by="XM_041088701.1:380..3205"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs htnywrdydt alfilkhlyr dipedpnflg esiegslkde
      901 nasmgwsder etideelplt fsardmvknf srkakkfikk p
//
LOCUS       XP_040944636             941 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944636
VERSION     XP_040944636.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088702.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..941
                     /product="phospholipase SGR2 isoform X1"
                     /calculated_mol_wt=107184
     Region          678..879
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..941
                     /gene="LOC107908069"
                     /coded_by="XM_041088702.1:181..3006"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs htnywrdydt alfilkhlyr dipedpnflg esiegslkde
      901 nasmgwsder etideelplt fsardmvknf srkakkfikk p
//
LOCUS       XP_040944637             941 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944637
VERSION     XP_040944637.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088703.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..941
                     /product="phospholipase SGR2 isoform X1"
                     /calculated_mol_wt=107184
     Region          678..879
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..941
                     /gene="LOC107908069"
                     /coded_by="XM_041088703.1:384..3209"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs htnywrdydt alfilkhlyr dipedpnflg esiegslkde
      901 nasmgwsder etideelplt fsardmvknf srkakkfikk p
//
LOCUS       XP_040944639             941 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944639
VERSION     XP_040944639.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088705.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..941
                     /product="phospholipase SGR2 isoform X1"
                     /calculated_mol_wt=107184
     Region          678..879
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..941
                     /gene="LOC107908069"
                     /coded_by="XM_041088705.1:206..3031"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs htnywrdydt alfilkhlyr dipedpnflg esiegslkde
      901 nasmgwsder etideelplt fsardmvknf srkakkfikk p
//
LOCUS       XP_040944640             940 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944640
VERSION     XP_040944640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088706.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..940
                     /product="phospholipase SGR2 isoform X2"
                     /calculated_mol_wt=107127
     Region          677..878
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..940
                     /gene="LOC107908069"
                     /coded_by="XM_041088706.1:381..3203"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedienk emlmqkppml qkfdqklplk
      661 ledatksytp yirytklefk vdtffavgsp lgvflalcni riglgkgqdy wdeeniseem
      721 pacrqmfnif hpfdpvayrv eplvckeyit krpviipyhk ggkrlhigfq efterlaars
      781 hvvmdhfstv rncfeqakvl tacqsrdtdn legeenvkek eetsygslmi erltgsegri
      841 dhvlqdktfe hpylqaigsh tnywrdydta lfilkhlyrd ipedpnflge siegslkden
      901 asmgwsdere tideelpltf sardmvknfs rkakkfikkp
//
LOCUS       XP_040944641             936 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944641
VERSION     XP_040944641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088707.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..936
                     /product="phospholipase SGR2 isoform X3"
                     /calculated_mol_wt=106563
     Region          678..874
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..936
                     /gene="LOC107908069"
                     /coded_by="XM_041088707.1:395..3205"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrakvltacq srdtdnlege envkekeets ygslmierlt gsegridhvl
      841 qdktfehpyl qaigshtnyw rdydtalfil khlyrdiped pnflgesieg slkdenasmg
      901 wsderetide elpltfsard mvknfsrkak kfikkp
//
LOCUS       XP_040944642             936 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944642
VERSION     XP_040944642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088708.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..936
                     /product="phospholipase SGR2 isoform X3"
                     /calculated_mol_wt=106563
     Region          678..874
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..936
                     /gene="LOC107908069"
                     /coded_by="XM_041088708.1:421..3231"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrakvltacq srdtdnlege envkekeets ygslmierlt gsegridhvl
      841 qdktfehpyl qaigshtnyw rdydtalfil khlyrdiped pnflgesieg slkdenasmg
      901 wsderetide elpltfsard mvknfsrkak kfikkp
//
LOCUS       XP_040944643             936 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944643
VERSION     XP_040944643.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088709.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..936
                     /product="phospholipase SGR2 isoform X3"
                     /calculated_mol_wt=106563
     Region          678..874
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..936
                     /gene="LOC107908069"
                     /coded_by="XM_041088709.1:420..3230"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrakvltacq srdtdnlege envkekeets ygslmierlt gsegridhvl
      841 qdktfehpyl qaigshtnyw rdydtalfil khlyrdiped pnflgesieg slkdenasmg
      901 wsderetide elpltfsard mvknfsrkak kfikkp
//
LOCUS       XP_040944644             935 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944644
VERSION     XP_040944644.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088710.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..935
                     /product="phospholipase SGR2 isoform X4"
                     /calculated_mol_wt=106506
     Region          677..873
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..935
                     /gene="LOC107908069"
                     /coded_by="XM_041088710.1:181..2988"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedienk emlmqkppml qkfdqklplk
      661 ledatksytp yirytklefk vdtffavgsp lgvflalcni riglgkgqdy wdeeniseem
      721 pacrqmfnif hpfdpvayrv eplvckeyit krpviipyhk ggkrlhigfq efterlaars
      781 hvvmdhfstv rakvltacqs rdtdnlegee nvkekeetsy gslmierltg segridhvlq
      841 dktfehpylq aigshtnywr dydtalfilk hlyrdipedp nflgesiegs lkdenasmgw
      901 sderetidee lpltfsardm vknfsrkakk fikkp
//
LOCUS       XP_040944645             910 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040944645
VERSION     XP_040944645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088711.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..910
                     /product="phospholipase SGR2 isoform X5"
                     /calculated_mol_wt=103393
     Region          678..862
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..910
                     /gene="LOC107908069"
                     /coded_by="XM_041088711.1:381..3113"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs hthipqiysa flqsrhtdrs fmclqicshl dsppglyhmd
      901 clhnkllegl
//
LOCUS       XP_040944646             909 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944646
VERSION     XP_040944646.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088712.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..909
                     /product="phospholipase SGR2 isoform X6"
                     /calculated_mol_wt=103336
     Region          677..861
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..909
                     /gene="LOC107908069"
                     /coded_by="XM_041088712.1:381..3110"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedienk emlmqkppml qkfdqklplk
      661 ledatksytp yirytklefk vdtffavgsp lgvflalcni riglgkgqdy wdeeniseem
      721 pacrqmfnif hpfdpvayrv eplvckeyit krpviipyhk ggkrlhigfq efterlaars
      781 hvvmdhfstv rncfeqakvl tacqsrdtdn legeenvkek eetsygslmi erltgsegri
      841 dhvlqdktfe hpylqaigsh thipqiysaf lqsrhtdrsf mclqicshld sppglyhmdc
      901 lhnkllegl
//
LOCUS       XP_040944647             907 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040944647
VERSION     XP_040944647.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088713.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..907
                     /product="phospholipase SGR2 isoform X7"
                     /calculated_mol_wt=103357
     Region          644..845
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..907
                     /gene="LOC107908069"
                     /coded_by="XM_041088713.1:381..3104"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeekf dqklplkled atksytpyir ytklefkvdt ffavgsplgv
      661 flalcnirig lgkgqdywde eniseempac rqmfnifhpf dpvayrvepl vckeyitkrp
      721 viipyhkggk rlhigfqeft erlaarshvv mdhfstvrnc feqakvltac qsrdtdnleg
      781 eenvkekeet sygslmierl tgsegridhv lqdktfehpy lqaigshtny wrdydtalfi
      841 lkhlyrdipe dpnflgesie gslkdenasm gwsderetid eelpltfsar dmvknfsrka
      901 kkfikkp
//
LOCUS       XP_040944648             906 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_040944648
VERSION     XP_040944648.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088714.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..906
                     /product="phospholipase SGR2 isoform X8"
                     /calculated_mol_wt=102491
     Region          678..862
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..906
                     /gene="LOC107908069"
                     /coded_by="XM_041088714.1:381..3101"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs htvsmiisga fspgiltrly tsstlkprlp afrisvqtal
      901 visgsk
//
LOCUS       XP_040944649             905 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040944649
VERSION     XP_040944649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088715.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..905
                     /product="phospholipase SGR2 isoform X9"
                     /calculated_mol_wt=102772
     Region          678..857
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..905
                     /gene="LOC107908069"
                     /coded_by="XM_041088715.1:381..3098"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrakvltacq srdtdnlege envkekeets ygslmierlt gsegridhvl
      841 qdktfehpyl qaigshthip qiysaflqsr htdrsfmclq icshldsppg lyhmdclhnk
      901 llegl
//
LOCUS       XP_040944650             902 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X10 [Gossypium hirsutum].
ACCESSION   XP_040944650
VERSION     XP_040944650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088716.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..902
                     /product="phospholipase SGR2 isoform X10"
                     /calculated_mol_wt=102735
     Region          644..840
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..902
                     /gene="LOC107908069"
                     /coded_by="XM_041088716.1:391..3099"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeekf dqklplkled atksytpyir ytklefkvdt ffavgsplgv
      661 flalcnirig lgkgqdywde eniseempac rqmfnifhpf dpvayrvepl vckeyitkrp
      721 viipyhkggk rlhigfqeft erlaarshvv mdhfstvrak vltacqsrdt dnlegeenvk
      781 ekeetsygsl mierltgseg ridhvlqdkt fehpylqaig shtnywrdyd talfilkhly
      841 rdipedpnfl gesiegslkd enasmgwsde retideelpl tfsardmvkn fsrkakkfik
      901 kp
//
LOCUS       XP_040944651             880 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X11 [Gossypium hirsutum].
ACCESSION   XP_040944651
VERSION     XP_040944651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088717.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..880
                     /product="phospholipase SGR2 isoform X11"
                     /calculated_mol_wt=100049
     Region          678..863
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..880
                     /gene="LOC107908069"
                     /coded_by="XM_041088717.1:381..3023"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs htclfswhsd ktiyifyaqt
//
LOCUS       XP_040944652             875 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X12 [Gossypium hirsutum].
ACCESSION   XP_040944652
VERSION     XP_040944652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088718.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..875
                     /product="phospholipase SGR2 isoform X12"
                     /calculated_mol_wt=99902
     Region          612..813
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..875
                     /gene="LOC107908069"
                     /coded_by="XM_041088718.1:167..2794"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 mgvmsaelaa sfprteivgk sdyfrfgmrd slaieasflq reeellsiww keyaecsegp
       61 rasssfgkkl dmaedlsssk gsqsaqlytf eeervgvpvk gglyevdlvk rhcfpvywng
      121 etrrvlrghw farkggmdwl plredvaeql eiayrsqvwh rrkfqpsglf aarvdlqgst
      181 pglhalftge ddtweawlnv dasgfsgvis fsrngiklrr gysasqspkp tqdelrqrke
      241 eqmddycsqv pvrhlvfmvh gigqrleksn lvddvgnfrh itaslaerhl tshqrrkqrv
      301 lfipcqwrkg lklsgeaavd kitldgvrgl rvmlsatahd vlyymspiyc qsiidsvsnq
      361 lnrlylkflk rnpgydgkvs iyghslgsvl sydilchqen lsslfpmqcl yekdskdlec
      421 spdmidqsfe csslaniekn dstmmtkdiv dclgeeillp npsvieghve dkssvstkfd
      481 vaaedpmqks credvhqsln dfsgapwlee sgsgettevd fvvsdgcwek ateeeneear
      541 drdktikmlk eeidslkaki aelesnnsed igenkemlmq kppmlqkfdq klplkledat
      601 ksytpyiryt klefkvdtff avgsplgvfl alcniriglg kgqdywdeen iseempacrq
      661 mfnifhpfdp vayrveplvc keyitkrpvi ipyhkggkrl higfqefter laarshvvmd
      721 hfstvrncfe qakvltacqs rdtdnlegee nvkekeetsy gslmierltg segridhvlq
      781 dktfehpylq aigshtnywr dydtalfilk hlyrdipedp nflgesiegs lkdenasmgw
      841 sderetidee lpltfsardm vknfsrkakk fikkp
//
LOCUS       XP_040944653             871 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X13 [Gossypium hirsutum].
ACCESSION   XP_040944653
VERSION     XP_040944653.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088719.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..871
                     /product="phospholipase SGR2 isoform X13"
                     /calculated_mol_wt=98944
     Region          644..823
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..871
                     /gene="LOC107908069"
                     /coded_by="XM_041088719.1:395..3010"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeekf dqklplkled atksytpyir ytklefkvdt ffavgsplgv
      661 flalcnirig lgkgqdywde eniseempac rqmfnifhpf dpvayrvepl vckeyitkrp
      721 viipyhkggk rlhigfqeft erlaarshvv mdhfstvrak vltacqsrdt dnlegeenvk
      781 ekeetsygsl mierltgseg ridhvlqdkt fehpylqaig shthipqiys aflqsrhtdr
      841 sfmclqicsh ldsppglyhm dclhnklleg l
//
LOCUS       XP_040944654             862 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X14 [Gossypium hirsutum].
ACCESSION   XP_040944654
VERSION     XP_040944654.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088720.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..862
                     /product="phospholipase SGR2 isoform X14"
                     /calculated_mol_wt=97844
     Region          678..862
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..862
                     /gene="LOC107908069"
                     /coded_by="XM_041088720.1:381..2969"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrncfeqakv ltacqsrdtd nlegeenvke keetsygslm ierltgsegr
      841 idhvlqdktf ehpylqaigs ht
//
LOCUS       XP_040944655             857 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X15 [Gossypium hirsutum].
ACCESSION   XP_040944655
VERSION     XP_040944655.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088721.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..857
                     /product="phospholipase SGR2 isoform X15"
                     /calculated_mol_wt=97222
     Region          678..857
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..857
                     /gene="LOC107908069"
                     /coded_by="XM_041088721.1:381..2954"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 madslanpsv veangideas pdllkntpsn iarledvieh ckgrqmylaq trspsdggdv
       61 rwyfsdvpla enelaasfpr teivgksdyf rfgmrdslai easflqreee llsiwwkeya
      121 ecsegprass sfgkkldmae dlssskgsqs aqlytfeeer vgvpvkggly evdlvkrhcf
      181 pvywngetrr vlrghwfark ggmdwlplre dvaeqleiay rsqvwhrrkf qpsglfaarv
      241 dlqgstpglh alftgeddtw eawlnvdasg fsgvisfsrn giklrrgysa sqspkptqde
      301 lrqrkeeqmd dycsqvpvrh lvfmvhgigq rleksnlvdd vgnfrhitas laerhltshq
      361 rrkqrvlfip cqwrkglkls geaavdkitl dgvrglrvml satahdvlyy mspiycqsii
      421 dsvsnqlnrl ylkflkrnpg ydgkvsiygh slgsvlsydi lchqenlssl fpmqclyekd
      481 skdlecspdm idqsfecssl aniekndstm mtkdivdclg eeillpnpsv ieghvedkss
      541 vstkfdvaae dpmqkscred vhqslndfsg apwleesgsg ettevdfvvs dgcwekatee
      601 eneeardrdk tikmlkeeid slkakiaele snnsedigen kemlmqkppm lqkfdqklpl
      661 kledatksyt pyirytklef kvdtffavgs plgvflalcn iriglgkgqd ywdeenisee
      721 mpacrqmfni fhpfdpvayr veplvckeyi tkrpviipyh kggkrlhigf qefterlaar
      781 shvvmdhfst vrakvltacq srdtdnlege envkekeets ygslmierlt gsegridhvl
      841 qdktfehpyl qaigsht
//
LOCUS       XP_040944656             852 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X16 [Gossypium hirsutum].
ACCESSION   XP_040944656
VERSION     XP_040944656.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088722.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..852
                     /product="phospholipase SGR2 isoform X16"
                     /calculated_mol_wt=97420
     Region          589..790
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..852
                     /gene="LOC107908069"
                     /coded_by="XM_041088722.1:167..2725"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 mgvmsagtfp mflwlkmree ellsiwwkey aecsegpras ssfgkkldma edlssskgsq
       61 saqlytfeee rvgvpvkggl yevdlvkrhc fpvywngetr rvlrghwfar kggmdwlplr
      121 edvaeqleia yrsqvwhrrk fqpsglfaar vdlqgstpgl halftgeddt weawlnvdas
      181 gfsgvisfsr ngiklrrgys asqspkptqd elrqrkeeqm ddycsqvpvr hlvfmvhgig
      241 qrleksnlvd dvgnfrhita slaerhltsh qrrkqrvlfi pcqwrkglkl sgeaavdkit
      301 ldgvrglrvm lsatahdvly ymspiycqsi idsvsnqlnr lylkflkrnp gydgkvsiyg
      361 hslgsvlsyd ilchqenlss lfpmqclyek dskdlecspd midqsfecss laniekndst
      421 mmtkdivdcl geeillpnps vieghvedks svstkfdvaa edpmqkscre dvhqslndfs
      481 gapwleesgs gettevdfvv sdgcwekate eeneeardrd ktikmlkeei dslkakiael
      541 esnnsedige nkemlmqkpp mlqkfdqklp lkledatksy tpyirytkle fkvdtffavg
      601 splgvflalc niriglgkgq dywdeenise empacrqmfn ifhpfdpvay rveplvckey
      661 itkrpviipy hkggkrlhig fqefterlaa rshvvmdhfs tvrncfeqak vltacqsrdt
      721 dnlegeenvk ekeetsygsl mierltgseg ridhvlqdkt fehpylqaig shtnywrdyd
      781 talfilkhly rdipedpnfl gesiegslkd enasmgwsde retideelpl tfsardmvkn
      841 fsrkakkfik kp
//
LOCUS       XP_040944657             848 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X17 [Gossypium hirsutum].
ACCESSION   XP_040944657
VERSION     XP_040944657.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088723.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..848
                     /product="phospholipase SGR2 isoform X17"
                     /calculated_mol_wt=96953
     Region          585..786
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..848
                     /gene="LOC107908069"
                     /coded_by="XM_041088723.1:726..3272"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 mrdslaieas flqreeells iwwkeyaecs egprasssfg kkldmaedls sskgsqsaql
       61 ytfeeervgv pvkgglyevd lvkrhcfpvy wngetrrvlr ghwfarkggm dwlplredva
      121 eqleiayrsq vwhrrkfqps glfaarvdlq gstpglhalf tgeddtweaw lnvdasgfsg
      181 visfsrngik lrrgysasqs pkptqdelrq rkeeqmddyc sqvpvrhlvf mvhgigqrle
      241 ksnlvddvgn frhitaslae rhltshqrrk qrvlfipcqw rkglklsgea avdkitldgv
      301 rglrvmlsat ahdvlyymsp iycqsiidsv snqlnrlylk flkrnpgydg kvsiyghslg
      361 svlsydilch qenlsslfpm qclyekdskd lecspdmidq sfecsslani ekndstmmtk
      421 divdclgeei llpnpsvieg hvedkssvst kfdvaaedpm qkscredvhq slndfsgapw
      481 leesgsgett evdfvvsdgc wekateeene eardrdktik mlkeeidslk akiaelesnn
      541 sedigenkem lmqkppmlqk fdqklplkle datksytpyi rytklefkvd tffavgsplg
      601 vflalcniri glgkgqdywd eeniseempa crqmfnifhp fdpvayrvep lvckeyitkr
      661 pviipyhkgg krlhigfqef terlaarshv vmdhfstvrn cfeqakvlta cqsrdtdnle
      721 geenvkekee tsygslmier ltgsegridh vlqdktfehp ylqaigshtn ywrdydtalf
      781 ilkhlyrdip edpnflgesi egslkdenas mgwsdereti deelpltfsa rdmvknfsrk
      841 akkfikkp
//
LOCUS       XP_040944658             848 aa            linear   PLN 06-AUG-2024
DEFINITION  phospholipase SGR2 isoform X17 [Gossypium hirsutum].
ACCESSION   XP_040944658
VERSION     XP_040944658.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088724.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..848
                     /product="phospholipase SGR2 isoform X17"
                     /calculated_mol_wt=96953
     Region          585..786
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..848
                     /gene="LOC107908069"
                     /coded_by="XM_041088724.1:716..3262"
                     /db_xref="GeneID:107908069"
ORIGIN      
        1 mrdslaieas flqreeells iwwkeyaecs egprasssfg kkldmaedls sskgsqsaql
       61 ytfeeervgv pvkgglyevd lvkrhcfpvy wngetrrvlr ghwfarkggm dwlplredva
      121 eqleiayrsq vwhrrkfqps glfaarvdlq gstpglhalf tgeddtweaw lnvdasgfsg
      181 visfsrngik lrrgysasqs pkptqdelrq rkeeqmddyc sqvpvrhlvf mvhgigqrle
      241 ksnlvddvgn frhitaslae rhltshqrrk qrvlfipcqw rkglklsgea avdkitldgv
      301 rglrvmlsat ahdvlyymsp iycqsiidsv snqlnrlylk flkrnpgydg kvsiyghslg
      361 svlsydilch qenlsslfpm qclyekdskd lecspdmidq sfecsslani ekndstmmtk
      421 divdclgeei llpnpsvieg hvedkssvst kfdvaaedpm qkscredvhq slndfsgapw
      481 leesgsgett evdfvvsdgc wekateeene eardrdktik mlkeeidslk akiaelesnn
      541 sedigenkem lmqkppmlqk fdqklplkle datksytpyi rytklefkvd tffavgsplg
      601 vflalcniri glgkgqdywd eeniseempa crqmfnifhp fdpvayrvep lvckeyitkr
      661 pviipyhkgg krlhigfqef terlaarshv vmdhfstvrn cfeqakvlta cqsrdtdnle
      721 geenvkekee tsygslmier ltgsegridh vlqdktfehp ylqaigshtn ywrdydtalf
      781 ilkhlyrdip edpnflgesi egslkdenas mgwsdereti deelpltfsa rdmvknfsrk
      841 akkfikkp
//
LOCUS       XP_016694023             384 aa            linear   PLN 06-AUG-2024
DEFINITION  KRR1 small subunit processome component homolog [Gossypium
            hirsutum].
ACCESSION   XP_016694023
VERSION     XP_016694023.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838534.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="KRR1 small subunit processome component homolog"
                     /calculated_mol_wt=44323
     Region          50..132
                     /region_name="KH-I_KRR1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in KRR1 small subunit processome component and
                     similar proteins; cd22393"
                     /db_xref="CDD:411821"
     Site            order(55,57..64,88..94,105..107,110)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411821"
     Region          136..229
                     /region_name="KH-I_KRR1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in KRR1 small subunit processome component and
                     similar proteins; cd22394"
                     /db_xref="CDD:411822"
     Site            order(144..145,148..149,184,211)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411822"
     Site            order(159,167,170,208,211,213..214,216..217,220)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411822"
     Region          <286..357
                     /region_name="PTZ00399"
                     /note="cysteinyl-tRNA-synthetase; Provisional"
                     /db_xref="CDD:240402"
     CDS             1..384
                     /gene="LOC107910627"
                     /coded_by="XM_016838534.2:337..1491"
                     /db_xref="GeneID:107910627"
ORIGIN      
        1 mevenaekvn leqkkkhkgk hdkpkpwded pnidrwkiek fdpswnpdgl levssfstif
       61 pryrekylqe awpkvksalk eygiaaelnl vegsmtvstt rktrdpyiii kardliklls
      121 rsvpapqaik ilddemqcdi ikignlvrnk erfvkrrqrl vgpnsstlka leiltscyil
      181 vqgntvaamg sfkglkqvrr ivedcvenkm hpvyhikilm mkkelekdpa lkdenwdrfl
      241 ptfkkknvqt kkvkskekkp ytpfpppqqp skidqelesg eyflsekkkl aktweekqek
      301 qaqkaaenkr kreeafvppk epvkqdsnks enkeedvaal akslkqkake fgkqkslqti
      361 naeeyisapa aeqpskkkkk skht
//
LOCUS       XP_040944659             965 aa            linear   PLN 06-AUG-2024
DEFINITION  leucine-rich repeat receptor protein kinase HPCA1 [Gossypium
            hirsutum].
ACCESSION   XP_040944659
VERSION     XP_040944659.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088725.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..965
                     /product="leucine-rich repeat receptor protein kinase
                     HPCA1"
                     /calculated_mol_wt=105028
     Region          17..903
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          219..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          243..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          290..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          363..376
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          634..901
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(634..638,642,654,656,685,701..704,708,710,752,754,
                     756..757,759,770,773,791..794)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(634..638,642,654,656,685,701..704,708,752,754,
                     756..757,759,770)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(638,708,710,752,754,756,773,791..794)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(769..776,787..794)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..965
                     /gene="LOC107910629"
                     /coded_by="XM_041088725.1:420..3317"
                     /db_xref="GeneID:107910629"
ORIGIN      
        1 mtpfslllfl lffaaniafl savtdphdaa alqslkdswk ntppswdksd dpcgapwegv
       61 tcnssrvtal glstmglkgk lsgdigglte lrsldlsfnr dltgslsprl gdleklnili
      121 lagcgftgni peelgnlael sflalnsnnf tgkippslgk lsklywldla dnqlvgaipv
      181 stptspgldl llkakhfhfn knklsgtipp klfssemvli hilfdgnqlt gnipstlghv
      241 qtlevlrldr nalwgevpsn lnnltninel nlahnnltgp lpdltsmntl nyvdlsnnsf
      301 dpteapvwfs tlsslttlvi ehgllqgpvp eklfsfpqiq qvklrnnafn gtlnlgdsvg
      361 tqlqlvdlqn nqissitlgs gysntlilig npvcttaisn tnfcqiqqqn tkpystslan
      421 cgskscpvdq klspqsceca ypfegtlyfr gpmfrelsnv nmfhslemsl wvklgltpgs
      481 vflqnpffnv ddylqiqlal fpssgeyfnr sevlrigfdl snqtykpppe fgpyyfiasp
      541 ypfpashgts vskgviisva tgsailvlgl vgvgiyavrq kkraekaigl snpfaswaps
      601 gkdsggapql kgarwvsyde lkkctnnfse snelgyggyg kvykgtlsdg qsvaikraqh
      661 gsmqgglefk teiellsrvh hknlvglvgf cfdqgeqmlv yefmangtlr eslsgrsgiy
      721 ldwkrrlria lgsarglayl helanppiih rdikstnill denltakvad fglsklvsds
      781 skghvstqvk gtlgyldpey ymtqqlteks dvysfgvvml elitakqpie kgkyvvrevr
      841 svmdmkddeh yglrelmdps irssgnllgf gkflelamqc vedsatdrpt msdvvkaiet
      901 ilqndgmntn sttsasssat dfgvakgslr hpyadalpkk evnvsdsdaf dysggytlsa
      961 kvepk
//
LOCUS       XP_016690832              79 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent Clp protease proteolytic subunit 5,
            chloroplastic-like [Gossypium hirsutum].
ACCESSION   XP_016690832
VERSION     XP_016690832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..79
                     /product="ATP-dependent Clp protease proteolytic subunit
                     5, chloroplastic-like"
                     /calculated_mol_wt=8706
     Region          <1..70
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..79
                     /gene="LOC107908070"
                     /coded_by="XM_016835343.2:24..263"
                     /db_xref="GeneID:107908070"
ORIGIN      
        1 mihqplggtq ggqtdidiqa nemlhhkanl ngylayhtgq sldqinqdtd rdffmsvkea
       61 keyglidgvi mnplkalqh
//
LOCUS       XP_040944660              87 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-CoA-binding domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040944660
VERSION     XP_040944660.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088726.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..87
                     /product="acyl-CoA-binding domain-containing protein 2"
                     /calculated_mol_wt=9472
     Region          4..30
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <25..>72
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          32..63
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..87
                     /gene="LOC107908382"
                     /coded_by="XM_041088726.1:220..483"
                     /db_xref="GeneID:107908382"
ORIGIN      
        1 mlssgylpcw isalfasmga vvvldvnakd negqtplhya vmcerediak flvkqnvdkd
       61 tkdsdgnslv dlcdsdwpwl qhagkae
//
LOCUS       XP_040944661              87 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-CoA-binding domain-containing protein 2 [Gossypium hirsutum].
ACCESSION   XP_040944661
VERSION     XP_040944661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088727.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..87
                     /product="acyl-CoA-binding domain-containing protein 2"
                     /calculated_mol_wt=9472
     Region          4..30
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <25..>72
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          32..63
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..87
                     /gene="LOC107908382"
                     /coded_by="XM_041088727.1:330..593"
                     /db_xref="GeneID:107908382"
ORIGIN      
        1 mlssgylpcw isalfasmga vvvldvnakd negqtplhya vmcerediak flvkqnvdkd
       61 tkdsdgnslv dlcdsdwpwl qhagkae
//
LOCUS       XP_016694028             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transport system protein kup 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694028
VERSION     XP_016694028.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838539.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694028.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable potassium transport system protein kup
                     2 isoform X1"
                     /calculated_mol_wt=29236
     Region          <60..>182
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..256
                     /gene="LOC107910630"
                     /coded_by="XM_016838539.2:496..1266"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mkldfvwapy vlnlthlltd fktkkkyldv mvmgvglwhm lhvsnpsdyk fvlqtlkssl
       61 vslfpfstdi anaygiaevv vmlvttalvt lvmlliwqtn llmalcfpll fesreliyfs
      121 avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr ekismdfmie lgskletvrv
      181 pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea kwmklqvaql eayarrtefv
      241 aeqaklllky yksedk
//
LOCUS       XP_016694029             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transport system protein kup 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694029
VERSION     XP_016694029.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838540.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694029.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable potassium transport system protein kup
                     2 isoform X1"
                     /calculated_mol_wt=29236
     Region          <60..>182
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..256
                     /gene="LOC107910630"
                     /coded_by="XM_016838540.2:492..1262"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mkldfvwapy vlnlthlltd fktkkkyldv mvmgvglwhm lhvsnpsdyk fvlqtlkssl
       61 vslfpfstdi anaygiaevv vmlvttalvt lvmlliwqtn llmalcfpll fesreliyfs
      121 avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr ekismdfmie lgskletvrv
      181 pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea kwmklqvaql eayarrtefv
      241 aeqaklllky yksedk
//
LOCUS       XP_016694032             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transport system protein kup 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694032
VERSION     XP_016694032.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838543.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694032.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable potassium transport system protein kup
                     2 isoform X1"
                     /calculated_mol_wt=29236
     Region          <60..>182
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..256
                     /gene="LOC107910630"
                     /coded_by="XM_016838543.2:443..1213"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mkldfvwapy vlnlthlltd fktkkkyldv mvmgvglwhm lhvsnpsdyk fvlqtlkssl
       61 vslfpfstdi anaygiaevv vmlvttalvt lvmlliwqtn llmalcfpll fesreliyfs
      121 avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr ekismdfmie lgskletvrv
      181 pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea kwmklqvaql eayarrtefv
      241 aeqaklllky yksedk
//
LOCUS       XP_016694030             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transport system protein kup 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694030
VERSION     XP_016694030.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838541.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694030.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable potassium transport system protein kup
                     2 isoform X1"
                     /calculated_mol_wt=29236
     Region          <60..>182
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..256
                     /gene="LOC107910630"
                     /coded_by="XM_016838541.2:517..1287"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mkldfvwapy vlnlthlltd fktkkkyldv mvmgvglwhm lhvsnpsdyk fvlqtlkssl
       61 vslfpfstdi anaygiaevv vmlvttalvt lvmlliwqtn llmalcfpll fesreliyfs
      121 avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr ekismdfmie lgskletvrv
      181 pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea kwmklqvaql eayarrtefv
      241 aeqaklllky yksedk
//
LOCUS       XP_016694031             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transport system protein kup 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694031
VERSION     XP_016694031.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838542.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694031.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable potassium transport system protein kup
                     2 isoform X1"
                     /calculated_mol_wt=29236
     Region          <60..>182
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..256
                     /gene="LOC107910630"
                     /coded_by="XM_016838542.2:513..1283"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mkldfvwapy vlnlthlltd fktkkkyldv mvmgvglwhm lhvsnpsdyk fvlqtlkssl
       61 vslfpfstdi anaygiaevv vmlvttalvt lvmlliwqtn llmalcfpll fesreliyfs
      121 avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr ekismdfmie lgskletvrv
      181 pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea kwmklqvaql eayarrtefv
      241 aeqaklllky yksedk
//
LOCUS       XP_016694033             256 aa            linear   PLN 06-AUG-2024
DEFINITION  probable potassium transport system protein kup 2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016694033
VERSION     XP_016694033.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838544.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694033.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="probable potassium transport system protein kup
                     2 isoform X1"
                     /calculated_mol_wt=29236
     Region          <60..>182
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..256
                     /gene="LOC107910630"
                     /coded_by="XM_016838544.2:464..1234"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mkldfvwapy vlnlthlltd fktkkkyldv mvmgvglwhm lhvsnpsdyk fvlqtlkssl
       61 vslfpfstdi anaygiaevv vmlvttalvt lvmlliwqtn llmalcfpll fesreliyfs
      121 avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr ekismdfmie lgskletvrv
      181 pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea kwmklqvaql eayarrtefv
      241 aeqaklllky yksedk
//
LOCUS       XP_016694034             216 aa            linear   PLN 06-AUG-2024
DEFINITION  putative potassium transporter 12 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694034
VERSION     XP_016694034.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838545.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694034.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="putative potassium transporter 12 isoform X2"
                     /calculated_mol_wt=24444
     Region          <35..>142
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..216
                     /gene="LOC107910630"
                     /coded_by="XM_016838545.2:255..905"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mgqkailsfd syerslieep dashlvngsw vliagiaevv vmlvttalvt lvmlliwqtn
       61 llmalcfpll fesreliyfs avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr
      121 ekismdfmie lgskletvrv pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea
      181 kwmklqvaql eayarrtefv aeqaklllky yksedk
//
LOCUS       XP_016694035             216 aa            linear   PLN 06-AUG-2024
DEFINITION  putative potassium transporter 12 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694035
VERSION     XP_016694035.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838546.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694035.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..216
                     /product="putative potassium transporter 12 isoform X2"
                     /calculated_mol_wt=24444
     Region          <35..>142
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..216
                     /gene="LOC107910630"
                     /coded_by="XM_016838546.2:276..926"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mgqkailsfd syerslieep dashlvngsw vliagiaevv vmlvttalvt lvmlliwqtn
       61 llmalcfpll fesreliyfs avlskvmegg wlplvfatff ltvmyiwhyg svlkyqsevr
      121 ekismdfmie lgskletvrv pgtfqkismd fmielssklg tvvkvgldmv dsenkaalea
      181 kwmklqvaql eayarrtefv aeqaklllky yksedk
//
LOCUS       XP_040944663             175 aa            linear   PLN 06-AUG-2024
DEFINITION  putative potassium transporter 12 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944663
VERSION     XP_040944663.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088729.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="putative potassium transporter 12 isoform X3"
                     /calculated_mol_wt=20017
     Region          <1..>101
                     /region_name="K_trans"
                     /note="K+ potassium transporter; cl15781"
                     /db_xref="CDD:449589"
     CDS             1..175
                     /gene="LOC107910630"
                     /coded_by="XM_041088729.1:327..854"
                     /db_xref="GeneID:107910630"
ORIGIN      
        1 mlvttalvtl vmlliwqtnl lmalcfpllf esreliyfsa vlskvmeggw lplvfatffl
       61 tvmyiwhygs vlkyqsevre kismdfmiel gskletvrvp gtfqkismdf mielssklgt
      121 vvkvgldmvd senkaaleak wmklqvaqle ayarrtefva eqaklllkyy ksedk
//
LOCUS       XP_016694036             458 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694036
VERSION     XP_016694036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..458
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=51493
     Region          8..76
                     /region_name="DUF2439"
                     /note="Protein of unknown function (DUF2439); pfam10382"
                     /db_xref="CDD:463065"
     Region          134..210
                     /region_name="DUF2439"
                     /note="Protein of unknown function (DUF2439); pfam10382"
                     /db_xref="CDD:463065"
     CDS             1..458
                     /gene="LOC107910632"
                     /coded_by="XM_016838547.2:191..1567"
                     /db_xref="GeneID:107910632"
ORIGIN      
        1 meeekekkrw svaytkhikq krkvyhdgfl dlhissnklm lydesdklle crmlrrdevv
       61 ssaqtltfaa yfvdvgllqs pylnfsdark ksnevepidr slrpsqkiir efkknelqkh
      121 vaqqtgpttt kasvtewqvl yttqvtqkak kyhdgflklv nsaalqrqim lydgskklin
      181 srflnkdevi qsgesitfda hlvnigeaeg nhpglmdsda hvsnynaagk temihrvqnr
      241 lkthksflkg kpqkiasskv ysdpsfsipi iaetkssqni sadkplrdat qilsilrkpm
      301 iqvgittqst dknvmnpvsp vkdpqnsylt knflecsqlq eisiahhgss gkldniksne
      361 yidikippdi yskgldsvak sscngnkssk ntevgnlhqv hsenlesytk ccneesvlgs
      421 wsraaetche rvgvmedcte vknsreagrc psfdlgfd
//
LOCUS       XP_040944664             368 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944664
VERSION     XP_040944664.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088730.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..368
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=41033
     Region          45..120
                     /region_name="DUF2439"
                     /note="Protein of unknown function (DUF2439); pfam10382"
                     /db_xref="CDD:463065"
     CDS             1..368
                     /gene="LOC107910632"
                     /coded_by="XM_041088730.1:182..1288"
                     /db_xref="GeneID:107910632"
ORIGIN      
        1 mnfknmllsk lvqlqrklvs qvellshnea cettyqflli pdhekewqvl yttqvtqkak
       61 kyhdgflklv nsaalqrqim lydgskklin srflnkdevi qsgesitfda hlvnigeaeg
      121 nhpglmdsda hvsnynaagk temihrvqnr lkthksflkg kpqkiasskv ysdpsfsipi
      181 iaetkssqni sadkplrdat qilsilrkpm iqvgittqst dknvmnpvsp vkdpqnsylt
      241 knflecsqlq eisiahhgss gkldniksne yidikippdi yskgldsvak sscngnkssk
      301 ntevgnlhqv hsenlesytk ccneesvlgs wsraaetche rvgvmedcte vknsreagrc
      361 psfdlgfd
//
LOCUS       XP_040944665             368 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944665
VERSION     XP_040944665.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088731.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..368
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=41033
     Region          45..120
                     /region_name="DUF2439"
                     /note="Protein of unknown function (DUF2439); pfam10382"
                     /db_xref="CDD:463065"
     CDS             1..368
                     /gene="LOC107910632"
                     /coded_by="XM_041088731.1:205..1311"
                     /db_xref="GeneID:107910632"
ORIGIN      
        1 mnfknmllsk lvqlqrklvs qvellshnea cettyqflli pdhekewqvl yttqvtqkak
       61 kyhdgflklv nsaalqrqim lydgskklin srflnkdevi qsgesitfda hlvnigeaeg
      121 nhpglmdsda hvsnynaagk temihrvqnr lkthksflkg kpqkiasskv ysdpsfsipi
      181 iaetkssqni sadkplrdat qilsilrkpm iqvgittqst dknvmnpvsp vkdpqnsylt
      241 knflecsqlq eisiahhgss gkldniksne yidikippdi yskgldsvak sscngnkssk
      301 ntevgnlhqv hsenlesytk ccneesvlgs wsraaetche rvgvmedcte vknsreagrc
      361 psfdlgfd
//
LOCUS       XP_016694037             222 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694037
VERSION     XP_016694037.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838548.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="40S ribosomal protein S4 isoform X1"
                     /calculated_mol_wt=24702
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <108..>180
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..222
                     /gene="LOC107910633"
                     /coded_by="XM_016838548.2:799..1467"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkvcfdiq rsdfysyaka cygrcgkgah gfmrthkwrd
      121 sigafinvea sgtgglgryk smllffvslg hlvcksgpgs wpssvyaqla iypmahsaaq
      181 mgvgeydqra niryadsqps sgfldtqhfa qpnmtrtfkp tc
//
LOCUS       XP_040944666             222 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944666
VERSION     XP_040944666.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088732.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="40S ribosomal protein S4 isoform X1"
                     /calculated_mol_wt=24702
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <108..>180
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..222
                     /gene="LOC107910633"
                     /coded_by="XM_041088732.1:801..1469"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkvcfdiq rsdfysyaka cygrcgkgah gfmrthkwrd
      121 sigafinvea sgtgglgryk smllffvslg hlvcksgpgs wpssvyaqla iypmahsaaq
      181 mgvgeydqra niryadsqps sgfldtqhfa qpnmtrtfkp tc
//
LOCUS       XP_016694038             208 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694038
VERSION     XP_016694038.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838549.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..208
                     /product="40S ribosomal protein S4 isoform X2"
                     /calculated_mol_wt=23080
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <108..>166
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..208
                     /gene="LOC107910633"
                     /coded_by="XM_016838549.2:797..1423"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkvcfdiq rsdfysyaka cygrcgkgah gfmrthkwrd
      121 sigafinvea sgtggldlvc ksgpgswpss vyaqlaiypm ahsaaqmgvg eydqraniry
      181 adsqpssgfl dtqhfaqpnm trtfkptc
//
LOCUS       XP_040944667             208 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944667
VERSION     XP_040944667.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088733.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..208
                     /product="40S ribosomal protein S4 isoform X2"
                     /calculated_mol_wt=23080
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <108..>166
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..208
                     /gene="LOC107910633"
                     /coded_by="XM_041088733.1:799..1425"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkvcfdiq rsdfysyaka cygrcgkgah gfmrthkwrd
      121 sigafinvea sgtggldlvc ksgpgswpss vyaqlaiypm ahsaaqmgvg eydqraniry
      181 adsqpssgfl dtqhfaqpnm trtfkptc
//
LOCUS       XP_016694040             206 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016694040
VERSION     XP_016694040.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838551.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="40S ribosomal protein S4 isoform X3"
                     /calculated_mol_wt=22910
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <108..>164
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..206
                     /gene="LOC107910633"
                     /coded_by="XM_016838551.2:798..1418"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkvcfdiq rsdfysyaka cygrcgkgah gfmrthkwrd
      121 sigafinvea sgtgdlvcks gpgswpssvy aqlaiypmah saaqmgvgey dqraniryad
      181 sqpssgfldt qhfaqpnmtr tfkptc
//
LOCUS       XP_040944668             206 aa            linear   PLN 06-AUG-2024
DEFINITION  40S ribosomal protein S4 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944668
VERSION     XP_040944668.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088734.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="40S ribosomal protein S4 isoform X3"
                     /calculated_mol_wt=22910
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <108..>164
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..206
                     /gene="LOC107910633"
                     /coded_by="XM_041088734.1:800..1420"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkvcfdiq rsdfysyaka cygrcgkgah gfmrthkwrd
      121 sigafinvea sgtgdlvcks gpgswpssvy aqlaiypmah saaqmgvgey dqraniryad
      181 sqpssgfldt qhfaqpnmtr tfkptc
//
LOCUS       XP_016694041             199 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694041
VERSION     XP_016694041.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838552.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..199
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=22039
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <85..>157
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..199
                     /gene="LOC107910633"
                     /coded_by="XM_016838552.2:799..1398"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkgahgfm rthkwrdsig afinveasgt gglgryksml
      121 lffvslghlv cksgpgswps svyaqlaiyp mahsaaqmgv geydqranir yadsqpssgf
      181 ldtqhfaqpn mtrtfkptc
//
LOCUS       XP_016694042             193 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694042
VERSION     XP_016694042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838553.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..193
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=21425
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <79..>151
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..193
                     /gene="LOC107910633"
                     /coded_by="XM_016838553.2:802..1383"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkvcfdi
       61 qrsdfysyak acygrcgkga hgfmrthkwr dsigafinve asgtgglgry ksmllffvsl
      121 ghlvcksgpg swpssvyaql aiypmahsaa qmgvgeydqr aniryadsqp ssgfldtqhf
      181 aqpnmtrtfk ptc
//
LOCUS       XP_016694043             189 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694043
VERSION     XP_016694043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838554.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..189
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=20990
     Region          3..>35
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <75..>147
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..189
                     /gene="LOC107910633"
                     /coded_by="XM_016838554.2:799..1368"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggakai iwtpqvegmv atyshsakqt kvcfdiqrsd
       61 fysyakacyg rcgkgahgfm rthkwrdsig afinveasgt gglgryksml lffvslghlv
      121 cksgpgswps svyaqlaiyp mahsaaqmgv geydqranir yadsqpssgf ldtqhfaqpn
      181 mtrtfkptc
//
LOCUS       XP_016694044             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694044
VERSION     XP_016694044.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838555.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..185
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=20417
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <85..>143
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..185
                     /gene="LOC107910633"
                     /coded_by="XM_016838555.2:797..1354"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkgahgfm rthkwrdsig afinveasgt ggldlvcksg
      121 pgswpssvya qlaiypmahs aaqmgvgeyd qraniryads qpssgfldtq hfaqpnmtrt
      181 fkptc
//
LOCUS       XP_040944669             185 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944669
VERSION     XP_040944669.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088735.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..185
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=20417
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <85..>143
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..185
                     /gene="LOC107910633"
                     /coded_by="XM_041088735.1:800..1357"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkgahgfm rthkwrdsig afinveasgt ggldlvcksg
      121 pgswpssvya qlaiypmahs aaqmgvgeyd qraniryads qpssgfldtq hfaqpnmtrt
      181 fkptc
//
LOCUS       XP_016694045             183 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694045
VERSION     XP_016694045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..183
                     /product="uncharacterized protein isoform X8"
                     /calculated_mol_wt=20246
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <85..>141
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..183
                     /gene="LOC107910633"
                     /coded_by="XM_016838556.2:798..1349"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic cfpelsfgfl tspmllhfnf vfivfvnaga
       61 kaiiwtpqve gmvatyshsa kqtkgahgfm rthkwrdsig afinveasgt gdlvcksgpg
      121 swpssvyaql aiypmahsaa qmgvgeydqr aniryadsqp ssgfldtqhf aqpnmtrtfk
      181 ptc
//
LOCUS       XP_016694046             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694046
VERSION     XP_016694046.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838557.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="uncharacterized protein isoform X9"
                     /calculated_mol_wt=19803
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <79..>137
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..179
                     /gene="LOC107910633"
                     /coded_by="XM_016838557.2:802..1341"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkvcfdi
       61 qrsdfysyak acygrcgkga hgfmrthkwr dsigafinve asgtggldlv cksgpgswps
      121 svyaqlaiyp mahsaaqmgv geydqranir yadsqpssgf ldtqhfaqpn mtrtfkptc
//
LOCUS       XP_040944670             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944670
VERSION     XP_040944670.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088736.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="uncharacterized protein isoform X9"
                     /calculated_mol_wt=19803
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <79..>137
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..179
                     /gene="LOC107910633"
                     /coded_by="XM_041088736.1:802..1341"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkvcfdi
       61 qrsdfysyak acygrcgkga hgfmrthkwr dsigafinve asgtggldlv cksgpgswps
      121 svyaqlaiyp mahsaaqmgv geydqranir yadsqpssgf ldtqhfaqpn mtrtfkptc
//
LOCUS       XP_040944671             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944671
VERSION     XP_040944671.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088737.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..177
                     /product="uncharacterized protein isoform X10"
                     /calculated_mol_wt=19633
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <79..>135
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..177
                     /gene="LOC107910633"
                     /coded_by="XM_041088737.1:802..1335"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkvcfdi
       61 qrsdfysyak acygrcgkga hgfmrthkwr dsigafinve asgtgdlvck sgpgswpssv
      121 yaqlaiypma hsaaqmgvge ydqranirya dsqpssgfld tqhfaqpnmt rtfkptc
//
LOCUS       XP_040944672             177 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944672
VERSION     XP_040944672.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088738.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..177
                     /product="uncharacterized protein isoform X10"
                     /calculated_mol_wt=19633
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <79..>135
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..177
                     /gene="LOC107910633"
                     /coded_by="XM_041088738.1:802..1335"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkvcfdi
       61 qrsdfysyak acygrcgkga hgfmrthkwr dsigafinve asgtgdlvck sgpgswpssv
      121 yaqlaiypma hsaaqmgvge ydqranirya dsqpssgfld tqhfaqpnmt rtfkptc
//
LOCUS       XP_040944673             175 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944673
VERSION     XP_040944673.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088739.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="uncharacterized protein isoform X11"
                     /calculated_mol_wt=19368
     Region          3..>35
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <75..>133
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..175
                     /gene="LOC107910633"
                     /coded_by="XM_041088739.1:796..1323"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggakai iwtpqvegmv atyshsakqt kvcfdiqrsd
       61 fysyakacyg rcgkgahgfm rthkwrdsig afinveasgt ggldlvcksg pgswpssvya
      121 qlaiypmahs aaqmgvgeyd qraniryads qpssgfldtq hfaqpnmtrt fkptc
//
LOCUS       XP_040944674             173 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944674
VERSION     XP_040944674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088740.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="uncharacterized protein isoform X12"
                     /calculated_mol_wt=19198
     Region          3..>35
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <75..>131
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..173
                     /gene="LOC107910633"
                     /coded_by="XM_041088740.1:797..1318"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggakai iwtpqvegmv atyshsakqt kvcfdiqrsd
       61 fysyakacyg rcgkgahgfm rthkwrdsig afinveasgt gdlvcksgpg swpssvyaql
      121 aiypmahsaa qmgvgeydqr aniryadsqp ssgfldtqhf aqpnmtrtfk ptc
//
LOCUS       XP_016694047             170 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694047
VERSION     XP_016694047.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838558.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..170
                     /product="uncharacterized protein isoform X13"
                     /calculated_mol_wt=18762
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <56..>128
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..170
                     /gene="LOC107910633"
                     /coded_by="XM_016838558.2:797..1309"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkgahgf
       61 mrthkwrdsi gafinveasg tgglgryksm llffvslghl vcksgpgswp ssvyaqlaiy
      121 pmahsaaqmg vgeydqrani ryadsqpssg fldtqhfaqp nmtrtfkptc
//
LOCUS       XP_016694048             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694048
VERSION     XP_016694048.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838559.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein isoform X14"
                     /calculated_mol_wt=18327
     Region          3..>35
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <52..>124
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..166
                     /gene="LOC107910633"
                     /coded_by="XM_016838559.2:799..1299"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggakai iwtpqvegmv atyshsakqt kgahgfmrth
       61 kwrdsigafi nveasgtggl gryksmllff vslghlvcks gpgswpssvy aqlaiypmah
      121 saaqmgvgey dqraniryad sqpssgfldt qhfaqpnmtr tfkptc
//
LOCUS       XP_016694049             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694049
VERSION     XP_016694049.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838560.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..156
                     /product="uncharacterized protein isoform X15"
                     /calculated_mol_wt=17140
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <56..>114
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..156
                     /gene="LOC107910633"
                     /coded_by="XM_016838560.2:795..1265"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkgahgf
       61 mrthkwrdsi gafinveasg tggldlvcks gpgswpssvy aqlaiypmah saaqmgvgey
      121 dqraniryad sqpssgfldt qhfaqpnmtr tfkptc
//
LOCUS       XP_040944675             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944675
VERSION     XP_040944675.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088741.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..156
                     /product="uncharacterized protein isoform X15"
                     /calculated_mol_wt=17140
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <56..>114
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..156
                     /gene="LOC107910633"
                     /coded_by="XM_041088741.1:798..1268"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkgahgf
       61 mrthkwrdsi gafinveasg tggldlvcks gpgswpssvy aqlaiypmah saaqmgvgey
      121 dqraniryad sqpssgfldt qhfaqpnmtr tfkptc
//
LOCUS       XP_016694050             154 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694050
VERSION     XP_016694050.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838561.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..154
                     /product="uncharacterized protein isoform X16"
                     /calculated_mol_wt=16970
     Region          3..>28
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <56..>112
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..154
                     /gene="LOC107910633"
                     /coded_by="XM_016838561.2:796..1260"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggafic akaiiwtpqv egmvatyshs akqtkgahgf
       61 mrthkwrdsi gafinveasg tgdlvcksgp gswpssvyaq laiypmahsa aqmgvgeydq
      121 raniryadsq pssgfldtqh faqpnmtrtf kptc
//
LOCUS       XP_040944676             152 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944676
VERSION     XP_040944676.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088742.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="uncharacterized protein isoform X17"
                     /calculated_mol_wt=16705
     Region          3..>35
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <52..>110
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..152
                     /gene="LOC107910633"
                     /coded_by="XM_041088742.1:796..1254"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggakai iwtpqvegmv atyshsakqt kgahgfmrth
       61 kwrdsigafi nveasgtggl dlvcksgpgs wpssvyaqla iypmahsaaq mgvgeydqra
      121 niryadsqps sgfldtqhfa qpnmtrtfkp tc
//
LOCUS       XP_040944677             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944677
VERSION     XP_040944677.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088743.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="uncharacterized protein isoform X18"
                     /calculated_mol_wt=16535
     Region          3..>35
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     Region          <52..>108
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     CDS             1..150
                     /gene="LOC107910633"
                     /coded_by="XM_041088743.1:797..1249"
                     /db_xref="GeneID:107910633"
ORIGIN      
        1 mrarelkkhl krlnalrhwm leklggakai iwtpqvegmv atyshsakqt kgahgfmrth
       61 kwrdsigafi nveasgtgdl vcksgpgswp ssvyaqlaiy pmahsaaqmg vgeydqrani
      121 ryadsqpssg fldtqhfaqp nmtrtfkptc
//
LOCUS       XP_016694051             362 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At1g71250 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694051
VERSION     XP_016694051.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838562.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694051.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..362
                     /product="GDSL esterase/lipase At1g71250 isoform X1"
                     /calculated_mol_wt=39826
     Region          29..346
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(37,112,168,326,329)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(37,326,329)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(37,112,168)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..362
                     /gene="LOC107910635"
                     /coded_by="XM_016838562.2:76..1164"
                     /db_xref="GeneID:107910635"
ORIGIN      
        1 mdilikptlk lfisfailmv qygnaervpa lfvfgdslvd vgnnnflnsi aksnyfpygi
       61 dfnmqptgrf cngktfvdii gemlgvpyps pfadpytagv kllggvnyas aaagildesg
      121 qhygeryslr qqvlnfettl dqlrtmmgrd nltsflaksi ailvfgsndy innylmpsiy
      181 assfnynptq fsnlllnrya pqlltlynlg irkmfiagig plgcipnqra tgqaapgrcv
      241 dyvndilgtf nqglkslvdq lnkrpgaivt ygntygavgd ilnnpstygf nvvdkgccgi
      301 grnqgqitcl pfaypctnrd qyvfwdafhp tqaanvilar rafygppldt yplniqqmtl
      361 ih
//
LOCUS       XP_016694053             302 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At1g71250 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694053
VERSION     XP_016694053.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838564.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694053.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..302
                     /product="GDSL esterase/lipase At1g71250 isoform X2"
                     /calculated_mol_wt=33082
     Region          29..288
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(37,112,168)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..302
                     /gene="LOC107910635"
                     /coded_by="XM_016838564.2:77..985"
                     /db_xref="GeneID:107910635"
ORIGIN      
        1 mdilikptlk lfisfailmv qygnaervpa lfvfgdslvd vgnnnflnsi aksnyfpygi
       61 dfnmqptgrf cngktfvdii gemlgvpyps pfadpytagv kllggvnyas aaagildesg
      121 qhygeryslr qqvlnfettl dqlrtmmgrd nltsflaksi ailvfgsndy innylmpsiy
      181 assfnynptq fsnlllnrya pqlltlynlg irkmfiagig plgcipnqra tgqaapgrcv
      241 dyvndilgtf nqglkslvdq lnkrpgaivt ygntygavgd ilnnpstyal qdstwltrda
      301 ve
//
LOCUS       XP_016694054             175 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA repair RAD52-like protein 1, mitochondrial [Gossypium
            hirsutum].
ACCESSION   XP_016694054
VERSION     XP_016694054.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838565.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="DNA repair RAD52-like protein 1, mitochondrial"
                     /calculated_mol_wt=19167
     CDS             1..175
                     /gene="LOC107910636"
                     /coded_by="XM_016838565.2:173..700"
                     /db_xref="GeneID:107910636"
ORIGIN      
        1 massmaiktl aaspltrppl tkslsslvrl vsfstksddd ddaiptagis rpladilkel
       61 nkkvpdslvr lrtedgfnik yipwhivnri mnlhapewsg evrnitysad gksvsvvyrv
      121 tlygtdaeiy restgtasvd dpgygdpvqk aeamafrrac arfglglhly hedll
//
LOCUS       XP_016694055             235 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 38 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694055
VERSION     XP_016694055.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838566.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694055.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..235
                     /product="RNA-binding protein 38 isoform X1"
                     /calculated_mol_wt=24853
     Region          <1..60
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..235
                     /gene="LOC107910637"
                     /coded_by="XM_016838566.2:54..761"
                     /db_xref="GeneID:107910637"
ORIGIN      
        1 mkkyfeqfgd ileavvitdk atgrskgygf vtfrepdaam racvdaapvi dgrrancnla
       61 slgvqrskps tpkhgrnfrv mstfqtgfgg gvgtatafas aatfpphyai qqgipcnvyg
      121 yssyspdysn yptsyynvyg gataqfpmyg agpgglitgt gttfypylqf gegtgggata
      181 yssgqgyglq yphhlfqfst gsypqhygap mslaptpplq sgvtmplhap aiphr
//
LOCUS       XP_040944678             229 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 38 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944678
VERSION     XP_040944678.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088744.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..229
                     /product="RNA-binding protein 38 isoform X2"
                     /calculated_mol_wt=24205
     Region          <1..60
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..229
                     /gene="LOC107910637"
                     /coded_by="XM_041088744.1:54..743"
                     /db_xref="GeneID:107910637"
ORIGIN      
        1 mkkyfeqfgd ileavvitdk atgrskgygf vtfrepdaam racvdaapvi dgrrancnla
       61 slgvqrskps tpkhgrnfrv mstfqtgfgg gvgtatafas aatfpphyai qqgipcnvyg
      121 yssyspdysn yptsyynvyg gataqfpmyg agpgglitgt gttfypylqf gegtgggata
      181 yssgqgyglq yphhlfqfst gsypqhygap mslaptpplq svcfanpqa
//
LOCUS       XP_040944679             135 aa            linear   PLN 06-AUG-2024
DEFINITION  plasma membrane ATPase 2-like [Gossypium hirsutum].
ACCESSION   XP_040944679
VERSION     XP_040944679.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088745.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="plasma membrane ATPase 2-like"
                     /calculated_mol_wt=14836
     Region          <1..>110
                     /region_name="ATPase-IIIA_H"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     TIGR01647"
                     /db_xref="CDD:273731"
     CDS             1..135
                     /gene="LOC121214701"
                     /coded_by="XM_041088745.1:66..473"
                     /db_xref="GeneID:121214701"
ORIGIN      
        1 mtaieemagm dvlcsdktgt ltlnrltvdr nlvevfsknm dkdlvvllaa rasrlenqda
       61 idaaiinmva dpkearanik evhflpfnpv dkrtaityid sdepkgrnfk gelrpllggl
      121 htaaclcksm wltfs
//
LOCUS       XP_016694057             205 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL58 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694057
VERSION     XP_016694057.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838568.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="RING-H2 finger protein ATL58 isoform X1"
                     /calculated_mol_wt=22868
     Region          <23..>184
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          104..147
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            132..137
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..205
                     /gene="LOC107910639"
                     /coded_by="XM_016838568.2:299..916"
                     /db_xref="GeneID:107910639"
ORIGIN      
        1 mrsrslsvse pqtspsssvs aelklyqafi fsvpiffafi llfmfylfyl rrrradwssl
       61 rmrtspgpds dlsismaelg lkkevremlp iiiyketfsi rdtqcsvclg eyqaedklqq
      121 ipacghtfhm dcidhwlanh ttcplcrlsv ltssdklpvi qaansqvssn pvnsnglavq
      181 tvaqnceeth gvqpleqtig daris
//
LOCUS       XP_040944680             205 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL58 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944680
VERSION     XP_040944680.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088746.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="RING-H2 finger protein ATL58 isoform X1"
                     /calculated_mol_wt=22868
     Region          <23..>184
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          104..147
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            132..137
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..205
                     /gene="LOC107910639"
                     /coded_by="XM_041088746.1:478..1095"
                     /db_xref="GeneID:107910639"
ORIGIN      
        1 mrsrslsvse pqtspsssvs aelklyqafi fsvpiffafi llfmfylfyl rrrradwssl
       61 rmrtspgpds dlsismaelg lkkevremlp iiiyketfsi rdtqcsvclg eyqaedklqq
      121 ipacghtfhm dcidhwlanh ttcplcrlsv ltssdklpvi qaansqvssn pvnsnglavq
      181 tvaqnceeth gvqpleqtig daris
//
LOCUS       XP_016694058             144 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase ATL59 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694058
VERSION     XP_016694058.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838569.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="E3 ubiquitin-protein ligase ATL59 isoform X2"
                     /calculated_mol_wt=15638
     Region          <20..>123
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          43..86
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            71..76
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..144
                     /gene="LOC107910639"
                     /coded_by="XM_016838569.2:205..639"
                     /db_xref="GeneID:107910639"
ORIGIN      
        1 mrtspgpdsd lsismaelgl kkevremlpi iiyketfsir dtqcsvclge yqaedklqqi
       61 pacghtfhmd cidhwlanht tcplcrlsvl tssdklpviq aansqvssnp vnsnglavqt
      121 vaqnceethg vqpleqtigd aris
//
LOCUS       XP_040944681             144 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase ATL59 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944681
VERSION     XP_040944681.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088747.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="E3 ubiquitin-protein ligase ATL59 isoform X2"
                     /calculated_mol_wt=15638
     Region          <20..>123
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          43..86
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            71..76
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..144
                     /gene="LOC107910639"
                     /coded_by="XM_041088747.1:208..642"
                     /db_xref="GeneID:107910639"
ORIGIN      
        1 mrtspgpdsd lsismaelgl kkevremlpi iiyketfsir dtqcsvclge yqaedklqqi
       61 pacghtfhmd cidhwlanht tcplcrlsvl tssdklpviq aansqvssnp vnsnglavqt
      121 vaqnceethg vqpleqtigd aris
//
LOCUS       XP_016694059             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016694059
VERSION     XP_016694059.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838570.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15670
     CDS             1..150
                     /gene="LOC107910640"
                     /coded_by="XM_016838570.2:102..554"
                     /db_xref="GeneID:107910640"
ORIGIN      
        1 mpsfpairia aaisilillr estarelrps dhglgyqsqp tvglnssdtm sffgatsnss
       61 ssstpstmaf pkatnsndtp wwgaggnrrg sdhvrqvlll gslvcgvtgl allaasalvy
      121 cikirsspst hstkninnsn slvssiskrf
//
LOCUS       XP_040944682             646 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944682
VERSION     XP_040944682.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088748.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..646
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72780
     Region          <25..216
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          36..65
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(67,69,73..74,77..79,81..82,86,89,100,102,104,
                     108..109,112..114,116..117,121,124,134,136,138,142..143,
                     146..148,150..151,155)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          67..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          102..134
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          173..204
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          468..581
                     /region_name="PGG"
                     /note="Domain of unknown function; pfam13962"
                     /db_xref="CDD:433609"
     CDS             1..646
                     /gene="LOC107910147"
                     /coded_by="XM_041088748.1:181..2121"
                     /db_xref="GeneID:107910147"
ORIGIN      
        1 mrpleathgd lappyrrsss npyeddpkda strylplyka vdggdleatk kfldqhpdal
       61 csslstdgdt alhiavlagh vdiveelvgr msalelavkq rygstalnfa aiggvteiae
      121 llveknrkll eipndheqip lvvaalyghr dlvqylylkt pieeldptsk nhgailltac
      181 imdefydial dlvqryplla iaedtdkdta lhilaqkpsa fpsgsqltfw qrwtykcihl
      241 dpqkaslias gdiemphegp phrrsftkrv lhriseafwk glklcvpgft siyelklthl
      301 qarelltcic reapnledei kleavlkkal feavkqgive vvteimkhyp evvwfyddkd
      361 rniffvatae rqekifsliy kmgakknsla thwdkdfnnm lhqaaflaps srldrvsgaa
      421 lqmqrelqwf kevesvvqpk ykeminshfk tpralfsdyh kklveqgeqw tketaesctv
      481 vtalivtimf savftvpggy dnsgnpiyln qnsflvfivs dalslfsstt sllmflgilt
      541 sryreedflq tvptklmvgl smmffslatm mitfgvalfi vlrdriawvs fpiillaslp
      601 vtlfallqfp llveifisty gpgifdkpkk nlcpsgstrs strcfr
//
LOCUS       XP_040944683             646 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944683
VERSION     XP_040944683.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088749.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..646
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72780
     Region          <25..216
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          36..65
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(67,69,73..74,77..79,81..82,86,89,100,102,104,
                     108..109,112..114,116..117,121,124,134,136,138,142..143,
                     146..148,150..151,155)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          67..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          102..134
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          173..204
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          468..581
                     /region_name="PGG"
                     /note="Domain of unknown function; pfam13962"
                     /db_xref="CDD:433609"
     CDS             1..646
                     /gene="LOC107910147"
                     /coded_by="XM_041088749.1:276..2216"
                     /db_xref="GeneID:107910147"
ORIGIN      
        1 mrpleathgd lappyrrsss npyeddpkda strylplyka vdggdleatk kfldqhpdal
       61 csslstdgdt alhiavlagh vdiveelvgr msalelavkq rygstalnfa aiggvteiae
      121 llveknrkll eipndheqip lvvaalyghr dlvqylylkt pieeldptsk nhgailltac
      181 imdefydial dlvqryplla iaedtdkdta lhilaqkpsa fpsgsqltfw qrwtykcihl
      241 dpqkaslias gdiemphegp phrrsftkrv lhriseafwk glklcvpgft siyelklthl
      301 qarelltcic reapnledei kleavlkkal feavkqgive vvteimkhyp evvwfyddkd
      361 rniffvatae rqekifsliy kmgakknsla thwdkdfnnm lhqaaflaps srldrvsgaa
      421 lqmqrelqwf kevesvvqpk ykeminshfk tpralfsdyh kklveqgeqw tketaesctv
      481 vtalivtimf savftvpggy dnsgnpiyln qnsflvfivs dalslfsstt sllmflgilt
      541 sryreedflq tvptklmvgl smmffslatm mitfgvalfi vlrdriawvs fpiillaslp
      601 vtlfallqfp llveifisty gpgifdkpkk nlcpsgstrs strcfr
//
LOCUS       XP_016691051             200 aa            linear   PLN 06-AUG-2024
DEFINITION  WUSCHEL-related homeobox 4 [Gossypium hirsutum].
ACCESSION   XP_016691051
VERSION     XP_016691051.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835562.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016691051.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="WUSCHEL-related homeobox 4"
                     /calculated_mol_wt=22776
     Region          74..133
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..200
                     /gene="LOC107908393"
                     /coded_by="XM_016835562.2:24..626"
                     /db_xref="GeneID:107908393"
ORIGIN      
        1 mgnmkvhels rglwehessl slacnplrth nsntlssfhl ktfitpkptp tklassdqqp
       61 hspqvdmqag aggtrwsptq eqigilemmy rggmrtpnaq qieqitvqlg kygkiegknv
      121 fywfqnhkar erqkqkrnsl vlnsppitti tlntredgpy krkcrswsfe yieeesgsss
      181 sfkeeetrtl elfplhpegr
//
LOCUS       XP_016693589             287 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein ATHB-13 [Gossypium hirsutum].
ACCESSION   XP_016693589
VERSION     XP_016693589.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838100.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693589.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..287
                     /product="homeobox-leucine zipper protein ATHB-13"
                     /calculated_mol_wt=32560
     Region          80..133
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          135..176
                     /region_name="HALZ"
                     /note="Homeobox associated leucine zipper; pfam02183"
                     /db_xref="CDD:460477"
     CDS             1..287
                     /gene="LOC107910293"
                     /coded_by="XM_016838100.2:856..1719"
                     /db_xref="GeneID:107910293"
ORIGIN      
        1 mscngmaffp anfmlqsphe edhqpstsin qmlpscppqd fhgvasflgk rsmsfsgidv
       61 ceeangeddl sddgsqagek krrlnmeqvk tleknfelgn kleperkmql aralglqprq
      121 iaiwfqnrra rwktkqlekd ydllkrqyea ikadndalqt qnqklhaeim alksreptes
      181 inlnketegs csnrsenssd vkldisrtpa idsplsthpt srtffptsir ptggaaqlfq
      241 tsssrpdhhh pcqkmdqmvk eeslsnmfct iedqtgfwpw leqphfn
//
LOCUS       XP_016693590             287 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein ATHB-13 [Gossypium hirsutum].
ACCESSION   XP_016693590
VERSION     XP_016693590.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838101.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693590.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..287
                     /product="homeobox-leucine zipper protein ATHB-13"
                     /calculated_mol_wt=32560
     Region          80..133
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          135..176
                     /region_name="HALZ"
                     /note="Homeobox associated leucine zipper; pfam02183"
                     /db_xref="CDD:460477"
     CDS             1..287
                     /gene="LOC107910293"
                     /coded_by="XM_016838101.2:256..1119"
                     /db_xref="GeneID:107910293"
ORIGIN      
        1 mscngmaffp anfmlqsphe edhqpstsin qmlpscppqd fhgvasflgk rsmsfsgidv
       61 ceeangeddl sddgsqagek krrlnmeqvk tleknfelgn kleperkmql aralglqprq
      121 iaiwfqnrra rwktkqlekd ydllkrqyea ikadndalqt qnqklhaeim alksreptes
      181 inlnketegs csnrsenssd vkldisrtpa idsplsthpt srtffptsir ptggaaqlfq
      241 tsssrpdhhh pcqkmdqmvk eeslsnmfct iedqtgfwpw leqphfn
//
LOCUS       XP_016738956             476 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB124 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016738956
VERSION     XP_016738956.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883467.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016738956.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..476
                     /product="transcription factor MYB124 isoform X1"
                     /calculated_mol_wt=53533
     Region          11..>141
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          235..>282
                     /region_name="Alpha-mann_mid"
                     /note="Alpha mannosidase middle domain; pfam09261"
                     /db_xref="CDD:462728"
     CDS             1..476
                     /gene="LOC107948812"
                     /coded_by="XM_016883467.2:884..2314"
                     /db_xref="GeneID:107948812"
ORIGIN      
        1 mqetkkkngg nedskkkerh ivtwnqeedd ilreqislhg tqnwaiiask fkdkttrqcr
       61 rrwytylnsd fkkggwspee dmllceaqki fgnrwteiak vvsgrtdnav knrfstlckk
      121 rakyealake nsnscinpnn krillqngfn tdgttdsaap vkrmrrship dltescnfgd
      181 rahrvsgtii nqqlrhpfav lgqnlhnann lvqpqvnkvk dvsddaqsyr tqgtflkkdd
      241 pkitalmqqa ellsslalkv ntdgteesle nawkvlqefl nqskendtfr ytisdidfqi
      301 edfkdlledl rssnegsqqs wrqpdlyevs pssseystgs timphpager gektrdkide
      361 lhpdilsnhi geqncstkee aralssankn hgemisssdd qtniivasts ssaefsspvq
      421 vtplfrslaa gipspkfses ernfllktlg mespspnpan nlsqpppckr allhsl
//
LOCUS       XP_040944684             381 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB88 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944684
VERSION     XP_040944684.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088750.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..381
                     /product="transcription factor MYB88 isoform X2"
                     /calculated_mol_wt=42223
     Region          134..>187
                     /region_name="Alpha-mann_mid"
                     /note="Alpha mannosidase middle domain; pfam09261"
                     /db_xref="CDD:462728"
     CDS             1..381
                     /gene="LOC107948812"
                     /coded_by="XM_041088750.1:154..1299"
                     /db_xref="GeneID:107948812"
ORIGIN      
        1 mdrnskggfr tdnavknrfs tlckkrakye alakensnsc inpnnkrill qngfntdgtt
       61 dsaapvkrmr rshipdltes cnfgdrahrv sgtiinqqlr hpfavlgqnl hnannlvqpq
      121 vnkvkdvsdd aqsyrtqgtf lkkddpkita lmqqaellss lalkvntdgt eeslenawkv
      181 lqeflnqske ndtfrytisd idfqiedfkd lledlrssne gsqqswrqpd lyevspssse
      241 ystgstimph pagergektr dkidelhpdi lsnhigeqnc stkeearals sanknhgemi
      301 sssddqtnii vastsssaef sspvqvtplf rslaagipsp kfsesernfl lktlgmesps
      361 pnpannlsqp ppckrallhs l
//
LOCUS       XP_016738957             725 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g14390 [Gossypium hirsutum].
ACCESSION   XP_016738957
VERSION     XP_016738957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016883468.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..725
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g14390"
                     /calculated_mol_wt=79467
     Region          <111..706
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          117..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..702
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(446..449,452,454,466,468,497,521..524,573,577..578,
                     580,590..591)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     CDS             1..725
                     /gene="LOC107948813"
                     /coded_by="XM_016883468.2:286..2463"
                     /db_xref="GeneID:107948813"
ORIGIN      
        1 metsrvgfcl llctifmvvp vsigqltste trllfqvqkl leypevlqgw tkwtnfcylp
       61 hspslkivca nsrvteitiv gnrsspanvv pgsgpqglsg kfsmdslftv ltkfsslrvl
      121 slvslglwgp lppkinrfhs lqalnmtsnf isgripkqia sfqnltslvl adnlfngsvp
      181 dltglpllkv vnlggnllgp qfpslsqslv sitlsnnsfr sqipsglkkf nqlqrldiss
      241 nklvgplpsf llslasiqyl nlaqnqlsga lasttdcsnn lsfvdisnnl ligklpscig
      301 snsrnktvis swnclstgns nrqhpysfcn kealavkpve skeqeepgin lglilgiigg
      361 vvaiagaial lmfviirrsr ttedanyder sivdkmsvrs spkppidsrr vpqtmrsaai
      421 glpryrvfsl eeiedatnnf npsnfmgegs qgqlykgwlv dgsvvvvkcl klqqkhapqn
      481 lmqhmevlsk lrhrhlvsvl ghcivtyqdh pnvastvfvv fehisngslr dhltdwkkke
      541 ilkwpqrmai tigaargvqf lhtgispgiy gndlkidnil ldetltpkis nyniplplkt
      601 gsesplsnrl ssdenekedi yqlgvlllqa itgklvtfsn eldglklele kslaegpskl
      661 rgvidpsirg tfadesmktt vefainclsk dstkrpsied vlwnlqysiq vqegwassgn
      721 lathm
//
LOCUS       XP_016694123             333 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 42 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694123
VERSION     XP_016694123.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838634.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="serine carboxypeptidase-like 42 isoform X1"
                     /calculated_mol_wt=37529
     Region          <66..285
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..333
                     /gene="LOC107910681"
                     /coded_by="XM_016838634.2:490..1491"
                     /db_xref="GeneID:107910681"
ORIGIN      
        1 mekmlsqepk hssrwiywys ippantclfk evlsqpiyss rynkdilael srridplltl
       61 snscfghyip qladlildyn krfsgrpikl kaialgnpll dpdisvinae slcshgvisd
      121 etlllsktvc nasrhlkesi hqnlskecih vlnkleeamg sytdpgdlil piclsptllg
      181 qtfyqgthnr lhwkqlamss avatdpcrgd eirqylntpk vqealhantt hlssvwefcr
      241 ghlsyqresi giniipllsk llkssilvll fngdqdskip ltqtriianm lakelklvpv
      301 gsyalwydkk qacfakscll fkvfssihsr fmv
//
LOCUS       XP_016694124             333 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 42 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694124
VERSION     XP_016694124.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838635.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="serine carboxypeptidase-like 42 isoform X1"
                     /calculated_mol_wt=37529
     Region          <66..285
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..333
                     /gene="LOC107910681"
                     /coded_by="XM_016838635.2:490..1491"
                     /db_xref="GeneID:107910681"
ORIGIN      
        1 mekmlsqepk hssrwiywys ippantclfk evlsqpiyss rynkdilael srridplltl
       61 snscfghyip qladlildyn krfsgrpikl kaialgnpll dpdisvinae slcshgvisd
      121 etlllsktvc nasrhlkesi hqnlskecih vlnkleeamg sytdpgdlil piclsptllg
      181 qtfyqgthnr lhwkqlamss avatdpcrgd eirqylntpk vqealhantt hlssvwefcr
      241 ghlsyqresi giniipllsk llkssilvll fngdqdskip ltqtriianm lakelklvpv
      301 gsyalwydkk qacfakscll fkvfssihsr fmv
//
LOCUS       XP_016694125             332 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 42 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694125
VERSION     XP_016694125.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838636.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="serine carboxypeptidase-like 42 isoform X2"
                     /calculated_mol_wt=37401
     Region          <66..284
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..332
                     /gene="LOC107910681"
                     /coded_by="XM_016838636.2:485..1483"
                     /db_xref="GeneID:107910681"
ORIGIN      
        1 mekmlsqepk hssrwiywys ippantclfk evlsqpiyss rynkdilael srridplltl
       61 snscfghyip qladlildyn krfsgrpikl kaialgnpll dpdisvinae slcshgvisd
      121 etlllsktvc nasrhlkesi hqnlskecih vlnkleeamg sytdpgdlil piclsptllg
      181 qtfyqgthnr lhwklamssa vatdpcrgde irqylntpkv qealhantth lssvwefcrg
      241 hlsyqresig iniipllskl lkssilvllf ngdqdskipl tqtriianml akelklvpvg
      301 syalwydkkq acfakscllf kvfssihsrf mv
//
LOCUS       XP_016694127             316 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 42 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016694127
VERSION     XP_016694127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838638.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="serine carboxypeptidase-like 42 isoform X3"
                     /calculated_mol_wt=35338
     Region          <66..285
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..316
                     /gene="LOC107910681"
                     /coded_by="XM_016838638.2:490..1440"
                     /db_xref="GeneID:107910681"
ORIGIN      
        1 mekmlsqepk hssrwiywys ippantclfk evlsqpiyss rynkdilael srridplltl
       61 snscfghyip qladlildyn krfsgrpikl kaialgnpll dpdisvinae slcshgvisd
      121 etlllsktvc nasrhlkesi hqnlskecih vlnkleeamg sytdpgdlil piclsptllg
      181 qtfyqgthnr lhwkqlamss avatdpcrgd eirqylntpk vqealhantt hlssvwefcr
      241 ghlsyqresi giniipllsk llkssilvll fngdqdskip ltqtriianm lakelklvpv
      301 gsyalwlvgg lshlak
//
LOCUS       XP_016694119             877 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-amylase 3, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016694119
VERSION     XP_016694119.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838630.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..877
                     /product="alpha-amylase 3, chloroplastic isoform X1"
                     /calculated_mol_wt=98515
     Region          1..876
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     CDS             1..877
                     /gene="LOC107910680"
                     /coded_by="XM_016838630.2:116..2749"
                     /db_xref="GeneID:107910680"
ORIGIN      
        1 matlavgsll qnprlssprg qklllnlkpl rsldldcsph rkllcsrgac fsnsnpcgkf
       61 yivkasstdt apidtfssad ilyeqtfpvn riekvegkll irldqskdql nwrltigcsl
      121 sgkwilhwgv syvgdtgsew dqppqdmwph gsipikdyai etpfkkpskd dtfhevkidf
      181 npssaieaih filkdeetga syqhkgrdfr vslvnyledd gnmihakssf gkwpdaveql
      241 pnmvlkaeas cdsknenrrl egfyeeqpiv kevsvgnmvn vairkfpdaa nivlhletdi
      301 pgdvvvhwgv crddaktwei pavpyppett vfrnkalrtl lqptgngsra lftldekldg
      361 flfvlkldan swvnfqgndf yiplssarsv kgqsdsesee tsgkahtdgi ineirnlvsg
      421 lnsekslqtk vkeakesiln eieklaaeay sifrsstpsy peedsdadda eptinissgt
      481 gsgfeilcqg fnwesnksgr wymelkekas eisslgftvi wlppptesvs pegympkdly
      541 nlnsrygtid elkdlvkslh gvglkvlgdv vlnhrcahyq nqngvwnifg grlnwddrav
      601 vgddphfqgr gnkssgdnfh aapnidhsqd fvrkdliewl cwlreeigyd gwrldfvrgf
      661 wggyvkdyld asepyfavge ywdslsytyg emdhnqdahr qrivdwinat ngtagafdvt
      721 skgilhsale rceywrlsdq kgkppgvvgw wpsravtfie nhdtgstqgh wrfpggkemq
      781 gyayilthpg tpavfydhiv shhrseigal islrnrnkih crsiveivka erdvyaatid
      841 drvamkigpg yyeppsgpqr wslalegydy kvweass
//
LOCUS       XP_016694120             822 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-amylase 3, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016694120
VERSION     XP_016694120.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838631.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..822
                     /product="alpha-amylase 3, chloroplastic isoform X2"
                     /calculated_mol_wt=92711
     Region          39..821
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     CDS             1..822
                     /gene="LOC107910680"
                     /coded_by="XM_016838631.2:258..2726"
                     /db_xref="GeneID:107910680"
ORIGIN      
        1 mlvsqasdsl daryshqlrv shlvqlgrwl pphileeiqv egkllirldq skdqlnwrlt
       61 igcslsgkwi lhwgvsyvgd tgsewdqppq dmwphgsipi kdyaietpfk kpskddtfhe
      121 vkidfnpssa ieaihfilkd eetgasyqhk grdfrvslvn yleddgnmih akssfgkwpd
      181 aveqlpnmvl kaeascdskn enrrlegfye eqpivkevsv gnmvnvairk fpdaanivlh
      241 letdipgdvv vhwgvcrdda ktweipavpy ppettvfrnk alrtllqptg ngsralftld
      301 ekldgflfvl kldanswvnf qgndfyipls sarsvkgqsd seseetsgka htdgiineir
      361 nlvsglnsek slqtkvkeak esilneiekl aaeaysifrs stpsypeeds daddaeptin
      421 issgtgsgfe ilcqgfnwes nksgrwymel kekaseissl gftviwlppp tesvspegym
      481 pkdlynlnsr ygtidelkdl vkslhgvglk vlgdvvlnhr cahyqnqngv wnifggrlnw
      541 ddravvgddp hfqgrgnkss gdnfhaapni dhsqdfvrkd liewlcwlre eigydgwrld
      601 fvrgfwggyv kdyldasepy favgeywdsl sytygemdhn qdahrqrivd winatngtag
      661 afdvtskgil hsalerceyw rlsdqkgkpp gvvgwwpsra vtfienhdtg stqghwrfpg
      721 gkemqgyayi lthpgtpavf ydhivshhrs eigalislrn rnkihcrsiv eivkaerdvy
      781 aatiddrvam kigpgyyepp sgpqrwslal egydykvwea ss
//
LOCUS       XP_016694121             792 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-amylase 3, chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016694121
VERSION     XP_016694121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838632.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..792
                     /product="alpha-amylase 3, chloroplastic isoform X3"
                     /calculated_mol_wt=89282
     Region          10..791
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     CDS             1..792
                     /gene="LOC107910680"
                     /coded_by="XM_016838632.2:287..2665"
                     /db_xref="GeneID:107910680"
ORIGIN      
        1 mlgeykilev egkllirldq skdqlnwrlt igcslsgkwi lhwgvsyvgd tgsewdqppq
       61 dmwphgsipi kdyaietpfk kpskddtfhe vkidfnpssa ieaihfilkd eetgasyqhk
      121 grdfrvslvn yleddgnmih akssfgkwpd aveqlpnmvl kaeascdskn enrrlegfye
      181 eqpivkevsv gnmvnvairk fpdaanivlh letdipgdvv vhwgvcrdda ktweipavpy
      241 ppettvfrnk alrtllqptg ngsralftld ekldgflfvl kldanswvnf qgndfyipls
      301 sarsvkgqsd seseetsgka htdgiineir nlvsglnsek slqtkvkeak esilneiekl
      361 aaeaysifrs stpsypeeds daddaeptin issgtgsgfe ilcqgfnwes nksgrwymel
      421 kekaseissl gftviwlppp tesvspegym pkdlynlnsr ygtidelkdl vkslhgvglk
      481 vlgdvvlnhr cahyqnqngv wnifggrlnw ddravvgddp hfqgrgnkss gdnfhaapni
      541 dhsqdfvrkd liewlcwlre eigydgwrld fvrgfwggyv kdyldasepy favgeywdsl
      601 sytygemdhn qdahrqrivd winatngtag afdvtskgil hsalerceyw rlsdqkgkpp
      661 gvvgwwpsra vtfienhdtg stqghwrfpg gkemqgyayi lthpgtpavf ydhivshhrs
      721 eigalislrn rnkihcrsiv eivkaerdvy aatiddrvam kigpgyyepp sgpqrwslal
      781 egydykvwea ss
//
LOCUS       XP_040944685             792 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-amylase 3, chloroplastic isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944685
VERSION     XP_040944685.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088751.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..792
                     /product="alpha-amylase 3, chloroplastic isoform X3"
                     /calculated_mol_wt=89282
     Region          10..791
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     CDS             1..792
                     /gene="LOC107910680"
                     /coded_by="XM_041088751.1:183..2561"
                     /db_xref="GeneID:107910680"
ORIGIN      
        1 mlgeykilev egkllirldq skdqlnwrlt igcslsgkwi lhwgvsyvgd tgsewdqppq
       61 dmwphgsipi kdyaietpfk kpskddtfhe vkidfnpssa ieaihfilkd eetgasyqhk
      121 grdfrvslvn yleddgnmih akssfgkwpd aveqlpnmvl kaeascdskn enrrlegfye
      181 eqpivkevsv gnmvnvairk fpdaanivlh letdipgdvv vhwgvcrdda ktweipavpy
      241 ppettvfrnk alrtllqptg ngsralftld ekldgflfvl kldanswvnf qgndfyipls
      301 sarsvkgqsd seseetsgka htdgiineir nlvsglnsek slqtkvkeak esilneiekl
      361 aaeaysifrs stpsypeeds daddaeptin issgtgsgfe ilcqgfnwes nksgrwymel
      421 kekaseissl gftviwlppp tesvspegym pkdlynlnsr ygtidelkdl vkslhgvglk
      481 vlgdvvlnhr cahyqnqngv wnifggrlnw ddravvgddp hfqgrgnkss gdnfhaapni
      541 dhsqdfvrkd liewlcwlre eigydgwrld fvrgfwggyv kdyldasepy favgeywdsl
      601 sytygemdhn qdahrqrivd winatngtag afdvtskgil hsalerceyw rlsdqkgkpp
      661 gvvgwwpsra vtfienhdtg stqghwrfpg gkemqgyayi lthpgtpavf ydhivshhrs
      721 eigalislrn rnkihcrsiv eivkaerdvy aatiddrvam kigpgyyepp sgpqrwslal
      781 egydykvwea ss
//
LOCUS       XP_040944686             731 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-amylase 3, chloroplastic isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944686
VERSION     XP_040944686.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088752.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..731
                     /product="alpha-amylase 3, chloroplastic isoform X4"
                     /calculated_mol_wt=82296
     Region          1..730
                     /region_name="PLN02784"
                     /note="alpha-amylase"
                     /db_xref="CDD:215419"
     CDS             1..731
                     /gene="LOC107910680"
                     /coded_by="XM_041088752.1:741..2936"
                     /db_xref="GeneID:107910680"
ORIGIN      
        1 mwphgsipik dyaietpfkk pskddtfhev kidfnpssai eaihfilkde etgasyqhkg
       61 rdfrvslvny leddgnmiha kssfgkwpda veqlpnmvlk aeascdskne nrrlegfyee
      121 qpivkevsvg nmvnvairkf pdaanivlhl etdipgdvvv hwgvcrddak tweipavpyp
      181 pettvfrnka lrtllqptgn gsralftlde kldgflfvlk ldanswvnfq gndfyiplss
      241 arsvkgqsds eseetsgkah tdgiineirn lvsglnseks lqtkvkeake silneiekla
      301 aeaysifrss tpsypeedsd addaeptini ssgtgsgfei lcqgfnwesn ksgrwymelk
      361 ekaseisslg ftviwlpppt esvspegymp kdlynlnsry gtidelkdlv kslhgvglkv
      421 lgdvvlnhrc ahyqnqngvw nifggrlnwd dravvgddph fqgrgnkssg dnfhaapnid
      481 hsqdfvrkdl iewlcwlree igydgwrldf vrgfwggyvk dyldasepyf avgeywdsls
      541 ytygemdhnq dahrqrivdw inatngtaga fdvtskgilh salerceywr lsdqkgkppg
      601 vvgwwpsrav tfienhdtgs tqghwrfpgg kemqgyayil thpgtpavfy dhivshhrse
      661 igalislrnr nkihcrsive ivkaerdvya atiddrvamk igpgyyepps gpqrwslale
      721 gydykvweas s
//
LOCUS       XP_040944687             276 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial outer membrane protein porin of 36 kDa [Gossypium
            hirsutum].
ACCESSION   XP_040944687
VERSION     XP_040944687.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088753.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="mitochondrial outer membrane protein porin of 36
                     kDa"
                     /calculated_mol_wt=29434
     Region          4..269
                     /region_name="Porin_3"
                     /note="Eukaryotic porin; pfam01459"
                     /db_xref="CDD:460220"
     CDS             1..276
                     /gene="LOC107908087"
                     /coded_by="XM_041088753.1:104..934"
                     /db_xref="GeneID:107908087"
ORIGIN      
        1 mgkgpglysd igkkardlly kdyqadhkft vttytsngva itstgikkge llladvstel
       61 knnnittnvk vdtkstlfat vtvdepapgl ktifsfivpd qrsgkvelqy qheyagists
      121 igfnanplvn fsgvvgnncv svgtdlsfdt asgnftklna glnfthsdli asltlndkgd
      181 tlnasyyhiv spltntavga elthsfssne ntltigtqha ldplttvkar lnnygrasgl
      241 iqhewrpksl ftisgdvdtr aieksakvgl alalkp
//
LOCUS       XP_040944688             276 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial outer membrane protein porin of 36 kDa [Gossypium
            hirsutum].
ACCESSION   XP_040944688
VERSION     XP_040944688.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088754.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="mitochondrial outer membrane protein porin of 36
                     kDa"
                     /calculated_mol_wt=29434
     Region          4..269
                     /region_name="Porin_3"
                     /note="Eukaryotic porin; pfam01459"
                     /db_xref="CDD:460220"
     CDS             1..276
                     /gene="LOC107908087"
                     /coded_by="XM_041088754.1:104..934"
                     /db_xref="GeneID:107908087"
ORIGIN      
        1 mgkgpglysd igkkardlly kdyqadhkft vttytsngva itstgikkge llladvstel
       61 knnnittnvk vdtkstlfat vtvdepapgl ktifsfivpd qrsgkvelqy qheyagists
      121 igfnanplvn fsgvvgnncv svgtdlsfdt asgnftklna glnfthsdli asltlndkgd
      181 tlnasyyhiv spltntavga elthsfssne ntltigtqha ldplttvkar lnnygrasgl
      241 iqhewrpksl ftisgdvdtr aieksakvgl alalkp
//
LOCUS       XP_016690846             276 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial outer membrane protein porin of 36 kDa [Gossypium
            hirsutum].
ACCESSION   XP_016690846
VERSION     XP_016690846.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835357.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690846.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="mitochondrial outer membrane protein porin of 36
                     kDa"
                     /calculated_mol_wt=29434
     Region          4..269
                     /region_name="Porin_3"
                     /note="Eukaryotic porin; pfam01459"
                     /db_xref="CDD:460220"
     CDS             1..276
                     /gene="LOC107908087"
                     /coded_by="XM_016835357.2:191..1021"
                     /db_xref="GeneID:107908087"
ORIGIN      
        1 mgkgpglysd igkkardlly kdyqadhkft vttytsngva itstgikkge llladvstel
       61 knnnittnvk vdtkstlfat vtvdepapgl ktifsfivpd qrsgkvelqy qheyagists
      121 igfnanplvn fsgvvgnncv svgtdlsfdt asgnftklna glnfthsdli asltlndkgd
      181 tlnasyyhiv spltntavga elthsfssne ntltigtqha ldplttvkar lnnygrasgl
      241 iqhewrpksl ftisgdvdtr aieksakvgl alalkp
//
LOCUS       XP_016675631             391 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TWIN LOV 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675631
VERSION     XP_016675631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="protein TWIN LOV 1 isoform X1"
                     /calculated_mol_wt=43252
     Region          32..>139
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
     Region          246..>360
                     /region_name="PRK13559"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237427"
     CDS             1..391
                     /gene="LOC107894982"
                     /coded_by="XM_016820142.2:863..2038"
                     /db_xref="GeneID:107894982"
ORIGIN      
        1 mdsilgliqq sfktrysqwv realdelpdn ftitdpsisg hpivfasrgf lkmsgyslee
       61 vigqngkifq gpktnrrtvm eiseairqer dvqvnlvnyr kdgtpfwmlf hmspvfgked
      121 grvihfvavq vpitrkprrn ggvslnedgs gfneimfgsc rkevdtnpvl elgrvlslds
      181 sanvldieet ceasdfekrm aanafnsils vltnysestg rlvcgtrcsv pgvcyisssl
      241 nislgrirqs fvlidphlpg mpivyasdaf lkltgydrhe ilglnfavln gadtdsstlh
      301 qikesiqteq actvhilsyr kdkssfwncl hlspvrnasg kvayfvgvqi eeecknkerh
      361 glspemrqls tvgavkvavr sllmaagssk s
//
LOCUS       XP_040944689             391 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TWIN LOV 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944689
VERSION     XP_040944689.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088755.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="protein TWIN LOV 1 isoform X1"
                     /calculated_mol_wt=43252
     Region          32..>139
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
     Region          246..>360
                     /region_name="PRK13559"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237427"
     CDS             1..391
                     /gene="LOC107894982"
                     /coded_by="XM_041088755.1:726..1901"
                     /db_xref="GeneID:107894982"
ORIGIN      
        1 mdsilgliqq sfktrysqwv realdelpdn ftitdpsisg hpivfasrgf lkmsgyslee
       61 vigqngkifq gpktnrrtvm eiseairqer dvqvnlvnyr kdgtpfwmlf hmspvfgked
      121 grvihfvavq vpitrkprrn ggvslnedgs gfneimfgsc rkevdtnpvl elgrvlslds
      181 sanvldieet ceasdfekrm aanafnsils vltnysestg rlvcgtrcsv pgvcyisssl
      241 nislgrirqs fvlidphlpg mpivyasdaf lkltgydrhe ilglnfavln gadtdsstlh
      301 qikesiqteq actvhilsyr kdkssfwncl hlspvrnasg kvayfvgvqi eeecknkerh
      361 glspemrqls tvgavkvavr sllmaagssk s
//
LOCUS       XP_016675632             378 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TWIN LOV 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675632
VERSION     XP_016675632.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820143.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..378
                     /product="protein TWIN LOV 1 isoform X2"
                     /calculated_mol_wt=41766
     Region          32..>139
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
     Region          246..>347
                     /region_name="PRK13559"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237427"
     CDS             1..378
                     /gene="LOC107894982"
                     /coded_by="XM_016820143.2:806..1942"
                     /db_xref="GeneID:107894982"
ORIGIN      
        1 mdsilgliqq sfktrysqwv realdelpdn ftitdpsisg hpivfasrgf lkmsgyslee
       61 vigqngkifq gpktnrrtvm eiseairqer dvqvnlvnyr kdgtpfwmlf hmspvfgked
      121 grvihfvavq vpitrkprrn ggvslnedgs gfneimfgsc rkevdtnpvl elgrvlslds
      181 sanvldieet ceasdfekrm aanafnsils vltnysestg rlvcgtrcsv pgvcyisssl
      241 nislgrirqs fvlidphlpg mpivyasdaf lkltvlngad tdsstlhqik esiqteqact
      301 vhilsyrkdk ssfwnclhls pvrnasgkva yfvgvqieee cknkerhgls pemrqlstvg
      361 avkvavrsll maagssks
//
LOCUS       XP_040944690             378 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TWIN LOV 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944690
VERSION     XP_040944690.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088756.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..378
                     /product="protein TWIN LOV 1 isoform X2"
                     /calculated_mol_wt=41766
     Region          32..>139
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
     Region          246..>347
                     /region_name="PRK13559"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237427"
     CDS             1..378
                     /gene="LOC107894982"
                     /coded_by="XM_041088756.1:726..1862"
                     /db_xref="GeneID:107894982"
ORIGIN      
        1 mdsilgliqq sfktrysqwv realdelpdn ftitdpsisg hpivfasrgf lkmsgyslee
       61 vigqngkifq gpktnrrtvm eiseairqer dvqvnlvnyr kdgtpfwmlf hmspvfgked
      121 grvihfvavq vpitrkprrn ggvslnedgs gfneimfgsc rkevdtnpvl elgrvlslds
      181 sanvldieet ceasdfekrm aanafnsils vltnysestg rlvcgtrcsv pgvcyisssl
      241 nislgrirqs fvlidphlpg mpivyasdaf lkltvlngad tdsstlhqik esiqteqact
      301 vhilsyrkdk ssfwnclhls pvrnasgkva yfvgvqieee cknkerhgls pemrqlstvg
      361 avkvavrsll maagssks
//
LOCUS       XP_016675628             570 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 4.6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016675628
VERSION     XP_016675628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..570
                     /product="protein NRT1/ PTR FAMILY 4.6 isoform X1"
                     /calculated_mol_wt=62498
     Region          28..560
                     /region_name="MFS_NPF4"
                     /note="NRT1/PTR family (NPF), subfamily 4 of the Major
                     Facilitator Superfamily of transporters; cd17414"
                     /db_xref="CDD:340972"
     Site            order(41..42,45..46,49,82,158..159,161..163,166,192,
                     195..196,199,339,342..343,346..348,351,382,386,467..468,
                     472,476,492,495..496,499..500,503)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340972"
     CDS             1..570
                     /gene="LOC107894981"
                     /coded_by="XM_016820139.2:178..1890"
                     /db_xref="GeneID:107894981"
ORIGIN      
        1 megyqdnrwe gyvdwrgkpa lrgqhggmva asfvlvvevv enlaylanss nlvlylskhm
       61 hlspsksand vtnfmgtafl lallggflsd tffttyhiyl isaliqflgs vilamqarta
      121 slkprecsps ttpipchevg ggkalmlftg lylvalgvgg ikgslpthga eqfdantpqg
      181 rkqrstffny fvfclsfgal iavtfvvwve dnmgwkwgfs istiavslsi aiflagsavy
      241 rnkipfgspl ttigkvlvaa mlnscmsknp knaianltts psyrtetske gdhqiptesl
      301 kvlnraavnk paypalecsv qqveevkivl kifpifacti vlncclaqls tfsveqaatm
      361 ntklgslkip paslpvfpvv fimilaplyd hfiipfarrv tktemgithl qrigiglfls
      421 mvamavaalv eikrkrvaty sglldstnpl pitflwialq ylflgsadlf tlagllefff
      481 teapssmrsl atslswtsla mgyylssviv sivnnvsens ghkpwlsght ingyhlerfy
      541 wlmcvlsaln fmhyllwamr ykyrsagssk
//
LOCUS       XP_016675629             456 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 4.6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016675629
VERSION     XP_016675629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016820140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..456
                     /product="protein NRT1/ PTR FAMILY 4.6 isoform X2"
                     /calculated_mol_wt=49925
     Region          1..446
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(44..45,47..49,52,78,81..82,85,225,228..229,232..234,
                     237,268,272,353..354,358,362,378,381..382,385..386,389)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..456
                     /gene="LOC107894981"
                     /coded_by="XM_016820140.2:295..1665"
                     /db_xref="GeneID:107894981"
ORIGIN      
        1 mqartaslkp recspsttpi pchevgggka lmlftglylv algvggikgs lpthgaeqfd
       61 antpqgrkqr stffnyfvfc lsfgaliavt fvvwvednmg wkwgfsisti avslsiaifl
      121 agsavyrnki pfgsplttig kvlvaamlns cmsknpknai anlttspsyr tetskegdhq
      181 ipteslkvln raavnkpayp alecsvqqve evkivlkifp ifactivlnc claqlstfsv
      241 eqaatmntkl gslkippasl pvfpvvfimi laplydhfii pfarrvtkte mgithlqrig
      301 iglflsmvam avaalveikr krvatysgll dstnplpitf lwialqylfl gsadlftlag
      361 llefffteap ssmrslatsl swtslamgyy lssvivsivn nvsensghkp wlsghtingy
      421 hlerfywlmc vlsalnfmhy llwamrykyr sagssk
//
LOCUS       XP_016665650             593 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NRT1/ PTR FAMILY 3.1 [Gossypium hirsutum].
ACCESSION   XP_016665650
VERSION     XP_016665650.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016810161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016665650.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..593
                     /product="protein NRT1/ PTR FAMILY 3.1"
                     /calculated_mol_wt=65688
     Region          41..571
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(53..54,57..58,61,94,167..168,170..172,175,201,
                     204..205,208,354,357..358,361..363,366,398,402,484..485,
                     489,493,509,512..513,516..517,520)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..593
                     /gene="LOC107886263"
                     /coded_by="XM_016810161.2:365..2146"
                     /db_xref="GeneID:107886263"
ORIGIN      
        1 menhsmatat penkdsfats gnaddkqska fvndnekggi ktmpfillne iceklamvgf
       61 sknmvnyltq qlhmpltkaa ntvtnfngts sltpllgafi adsyagkfwt itvstaiyla
      121 gmivltlsaa lpqlrpppca gdqvcqeang sqmavlylsl lfaalgsggi rpcvaafgae
      181 qfveedptqp kktwvffnwy yfalgvsill astvlvyiqd nvgwswglgi ptlamalsii
      241 vfligyplyr nldpagspht rvlqvsvaaf rkrkipsisd pkflyvneel dasistdgll
      301 hhtkqlkfld kaaivteeds lkssekpnfw rlntvhrvee lksilrmlpi waagilfats
      361 naqqntfslq qantmerhlt ksfvipsasm svfgmlsvli tivlydrllv rvarritgle
      421 rginflqrma igffiaiiat mvagfvevkr khaasasgli dspestipis vfwlvpqysl
      481 hgiaeafmvi ghleffynqa pesmrstata lfwtsisagd ytstllvtlv hkysdwlpnr
      541 nlnkgkleyf ywlltllqal nivyylicak fytfkplshk tehvegvelt tqv
//
LOCUS       XP_016694226              97 aa            linear   PLN 06-AUG-2024
DEFINITION  MLO-like protein 10 [Gossypium hirsutum].
ACCESSION   XP_016694226
VERSION     XP_016694226.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838737.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..97
                     /product="MLO-like protein 10"
                     /calculated_mol_wt=11217
     Region          <1..>17
                     /region_name="PLN00070"
                     /note="aconitate hydratase"
                     /db_xref="CDD:215047"
     Region          <18..>96
                     /region_name="Mlo"
                     /note="Mlo family; pfam03094"
                     /db_xref="CDD:460801"
     CDS             1..97
                     /gene="LOC107910755"
                     /coded_by="XM_016838737.2:433..726"
                     /db_xref="GeneID:107910755"
ORIGIN      
        1 mkadwyacld nrvgfkgcff rqffrsvgrv dyltlrngfi nvhlapgskf nfqkyikrsl
       61 eddfkivvgv spvlwasfvv ylllnvrgwh alfwasc
//
LOCUS       XP_016691045             221 aa            linear   PLN 06-AUG-2024
DEFINITION  protein FAR1-RELATED SEQUENCE 5 [Gossypium hirsutum].
ACCESSION   XP_016691045
VERSION     XP_016691045.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="protein FAR1-RELATED SEQUENCE 5"
                     /calculated_mol_wt=25304
     Region          56..144
                     /region_name="FAR1"
                     /note="FAR1 DNA-binding domain; pfam03101"
                     /db_xref="CDD:335217"
     CDS             1..221
                     /gene="LOC107908379"
                     /coded_by="XM_016835556.2:16..681"
                     /db_xref="GeneID:107908379"
ORIGIN      
        1 mnnvpclcva vdldegaeai esftggeila fpceadsive phegmefese daakifydey
       61 arrvgfvmrv mscrrserdg rilvrrlgcn kegycvsirg kfgpvrkprp stregckami
      121 hikfnksgkw vitrfvkehn hplvvaprea rqtmdekdkk iqeltvelrn kkrlcaayqe
      181 qltafmkive ehsnqlskkv qnvvnnlkey esiepqllqq r
//
LOCUS       XP_016694186             243 aa            linear   PLN 06-AUG-2024
DEFINITION  dof zinc finger protein DOF1.6 [Gossypium hirsutum].
ACCESSION   XP_016694186
VERSION     XP_016694186.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838697.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="dof zinc finger protein DOF1.6"
                     /calculated_mol_wt=24925
     Region          28..78
                     /region_name="zf-Dof"
                     /note="Dof domain, zinc finger; pfam02701"
                     /db_xref="CDD:397014"
     CDS             1..243
                     /gene="LOC107910730"
                     /coded_by="XM_016838697.2:456..1187"
                     /db_xref="GeneID:107910730"
ORIGIN      
        1 mpadsgdrrp vrapgtmgsh ppaklteplp cprcdststk fcyynnynls qpryfckscr
       61 rywtqggtlr nvpvgggtrk sskrsrssss llspsvatss sssvtheaes vhmavnpvsa
      121 mpatgvkpev gladvnlndt vdlpvsggft sflnsqaegy ltlggyglgt gsgfdgvwgy
      181 pgngylgvyn ggdgdepaea vpgatgcntw qatgnveggg glvdgdcfgw pglaisapgk
      241 glk
//
LOCUS       XP_016694184             429 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein Os11g0197600 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016694184
VERSION     XP_016694184.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838695.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..429
                     /product="B3 domain-containing protein Os11g0197600
                     isoform X1"
                     /calculated_mol_wt=48135
     Region          7..98
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(11,20,23,25,53,62,64..65,67..68)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          224..320
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(228,231,239,242,244,272,284,286..287,289..290)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..429
                     /gene="LOC107910729"
                     /coded_by="XM_016838695.2:148..1437"
                     /db_xref="GeneID:107910729"
ORIGIN      
        1 msklrrphfl nvfsstssan slripvgfnr nlegrvsasv llkgpsgysw nvrlvqrndd
       61 llfdegwadf vadhslecgd flvfrydgdl vfdvkvfdqs scekevafhc kcsqagsvfn
      121 gilgqkryre eedvsldqdc eellkrirqs ssesvrdeeh cgrelilatt scqgltscde
      181 nhdgtilkit gkeddlnlhg sgciqmigef eekkvaqsfn scfpffvrim krfnvsgsyt
      241 lnipyqfame hlpncktelv lqnlkgacwt vnsvpttrvh tshtlcggwl sfvrsneika
      301 gdicifelah kfefrvhilr vgqedldrqs rkavldrsds tllkklvknt skvhsklkkv
      361 qicdnkgskv ldkwkygnaa kksasfvlcs lsrsgtgkqe aaisglrmmv tvdeekaars
      421 fasrfpsfv
//
LOCUS       XP_016694185             427 aa            linear   PLN 06-AUG-2024
DEFINITION  B3 domain-containing protein Os11g0197600 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016694185
VERSION     XP_016694185.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838696.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..427
                     /product="B3 domain-containing protein Os11g0197600
                     isoform X2"
                     /calculated_mol_wt=47935
     Region          7..98
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(11,20,23,25,53,62,64..65,67..68)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     Region          224..320
                     /region_name="B3_DNA"
                     /note="Plant-specific B3-DNA binding domain; cd10017"
                     /db_xref="CDD:197383"
     Site            order(228,231,239,242,244,272,284,286..287,289..290)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197383"
     CDS             1..427
                     /gene="LOC107910729"
                     /coded_by="XM_016838696.2:101..1384"
                     /db_xref="GeneID:107910729"
ORIGIN      
        1 msklrrphfl nvfsstssan slripvgfnr nlegrvsasv llkgpsgysw nvrlvqrndd
       61 llfdegwadf vadhslecgd flvfrydgdl vfdvkvfdqs scekevafhc kcsqagsvfn
      121 gilgqkryre eedvsldqdc eellkrirqs ssesvrdeeh cgrelilatt scqgltscde
      181 nhdgtilkit gkeddlnlhg sgciqmigef eekkvaqsfn scfpffvrim krfnvsgsyt
      241 lnipyqfame hlpncktelv lqnlkgacwt vnsvpttrvh tshtlcggwl sfvrsneika
      301 gdicifelah kfefrvhilr vgqedldrqs rkavldrsds tllkklvknt skvhsklkkv
      361 qicdnkgskv ldkwkygnaa kksasfvlcs lsrsgtgkqa isglrmmvtv deekaarsfa
      421 srfpsfv
//
LOCUS       XP_016691012             470 aa            linear   PLN 06-AUG-2024
DEFINITION  protein JINGUBANG [Gossypium hirsutum].
ACCESSION   XP_016691012
VERSION     XP_016691012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835523.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..470
                     /product="protein JINGUBANG"
                     /calculated_mol_wt=51646
     Region          <93..431
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          150..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          222..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          265..301
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          308..349
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          357..391
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          397..428
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..470
                     /gene="LOC107908326"
                     /coded_by="XM_016835523.2:271..1683"
                     /db_xref="GeneID:107908326"
ORIGIN      
        1 mrdgrggsnt vfeeadslrr sqyedmkypd psmpvnvpmt aaddlclvys naaancpafv
       61 egnrlscevs pltmspwnqt ntmeksswvp fdddntvpvn sligsltree ghiyslaatk
      121 dllytgsdsk nirvwknlke ftgfksnsgl vkaivisgek iftghqdgki rvwksslknp
      181 tlhkragtlp tlkdilkssi kpsnyvevrr kralwikhsd avsclsmnee qgllysaswd
      241 rsfkvwrisd skclesvqah ddavnsvvss fgeliftgsa dgtvkvwkre llrkgtkhtl
      301 dqtlikqeca vtalaiitss gpalycgssd glityrelak dfsqggalkg hklavlclea
      361 agsflftgsa dkticiwrrd gsvhtnisvl tghtgpvkcl avekdleakk eqrwivysgs
      421 ldksvkvwsv sefpqvgtmq skhqhqvsyd tesfpcdgss tsitsqhgty
//
LOCUS       XP_016693485             510 aa            linear   PLN 06-AUG-2024
DEFINITION  allene oxide synthase 1, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016693485
VERSION     XP_016693485.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837996.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..510
                     /product="allene oxide synthase 1, chloroplastic"
                     /calculated_mol_wt=57451
     Region          30..510
                     /region_name="PLN02648"
                     /note="allene oxide synthase"
                     /db_xref="CDD:215350"
     Site            order(125,129,146..147,156,160,163,167,313..314,317..318,
                     321,379..380,383,447,449,460..465,468..469)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410694"
     Site            order(129,239,243,246,312..313,316..317,320,379..382,496)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410694"
     CDS             1..510
                     /gene="LOC107910216"
                     /coded_by="XM_016837996.2:420..1952"
                     /db_xref="GeneID:107910216"
ORIGIN      
        1 masvslpfts vhlqcqaivr pvrasvsgkp svseppvttl seklplkkip gnygipfvgp
       61 ikdrldyfyn qgrdeffksk iqkyqstvfr tnmppgpfis pdpkvialld gksfpvlfdv
      121 skiekkdlft gtympsidlt ggyrilsyld psepkhaklk qliffllkss akrvipefea
      181 cytqlydtld kelaekgkss fqtvndqagf nflcraffrs nppdtklgdd gpsliskwvf
      241 fqlgpvlslg lpkyveelvi rtfplppflv kkdyqrlydf fyhssgfvqd eaeklgisre
      301 evchnllfat cfntfggmki ffpnmlkwis ragvklhtdl aqeirsairs nggkltmaam
      361 eqmplmksvv yeglrieppv psqygrakkd llieshdavy qvkagemlyg yqpfatkdpk
      421 ifenpeefvp drfmgddger llkhvlwsng petedpttan kqcagkdfvv lvsrlfvvel
      481 frrydsfeie vgksplgaav tvtslkrasf
//
LOCUS       XP_016693440             202 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML41 [Gossypium hirsutum].
ACCESSION   XP_016693440
VERSION     XP_016693440.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837951.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="probable calcium-binding protein CML41"
                     /calculated_mol_wt=22516
     Region          50..187
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..202
                     /gene="LOC107910175"
                     /coded_by="XM_016837951.2:232..840"
                     /db_xref="GeneID:107910175"
ORIGIN      
        1 meiasiskpp tkwfsnkglr lslsrlrsrs kssssllpps vaatvpalhn ntkeealqav
       61 fhrfdtdgdg kisseelisy fasigdnmsk eeaqrviqdf didgdnllef kefvklmegg
      121 negddikraf eiyevdkgsg citpvglqqm lnrlgdmksy edcvamirvf dldgngvldf
      181 hefqqmmkge pcklaevpre re
//
LOCUS       XP_016693439             353 aa            linear   PLN 06-AUG-2024
DEFINITION  probable galacturonosyltransferase-like 1 [Gossypium hirsutum].
ACCESSION   XP_016693439
VERSION     XP_016693439.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837950.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..353
                     /product="probable galacturonosyltransferase-like 1"
                     /calculated_mol_wt=39013
     Region          68..326
                     /region_name="Glyco_transf_8"
                     /note="Glycosyl transferase family 8; pfam01501"
                     /db_xref="CDD:279798"
     Site            order(72,74,103,172,174)
                     /site_type="active"
                     /db_xref="CDD:133051"
     CDS             1..353
                     /gene="LOC107910174"
                     /coded_by="XM_016837950.2:61..1122"
                     /db_xref="GeneID:107910174"
ORIGIN      
        1 mskpqhyhfv lllstvvval aaianaaaat sitprfkeap sfynspdcpl iideshgfsi
       61 lfsdqavhva mtldaayirg tvaailsilq hsscpqniaf hfvasadasl lratisssfp
      121 hlnflvypfc dssvsrlist sirsaldcpl nyarsylanl lpscvhrvvy ldsdlvlidd
      181 iaklaatplg dnsvlaapey cnanftsyft stfwsntyfs ltfanrkacy fntgvmvidl
      241 drwregdytt kieewmevqk rmriyelgsl ppfllvfagn ivpvdhrwnq hglggdnfig
      301 lcrdlhhgpv sllhwsgkgk pwarldangp cpldalwepy dllqpktpfa lds
//
LOCUS       XP_016693438             303 aa            linear   PLN 06-AUG-2024
DEFINITION  elongation of fatty acids protein 3-like [Gossypium hirsutum].
ACCESSION   XP_016693438
VERSION     XP_016693438.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837949.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="elongation of fatty acids protein 3-like"
                     /calculated_mol_wt=34813
     Region          32..277
                     /region_name="ELO"
                     /note="GNS1/SUR4 family; pfam01151"
                     /db_xref="CDD:460083"
     CDS             1..303
                     /gene="LOC107910173"
                     /coded_by="XM_016837949.2:253..1164"
                     /db_xref="GeneID:107910173"
ORIGIN      
        1 miimqsvkyy lsehpsivnf rwsntqtfgs mwsflfssis vyvlaattlh sflshilpkr
       61 rgvplgpipa lhsicislis avifigills svadirdtrw fwrrtktitt pfqwflcfpl
      121 gtrasgrvff wsyifylsrf lhllrtffii lrrrklrffh lfnqsillfm sflwlefcqs
      181 fqvlaillst llysvvygyr fwteiglpta cfsfvvncqv vllgcnlvch fgvlflhfvk
      241 ggcngmgawg fnsvlnavil glfldfyfkk hlkkgkvgnn sgqavgsssa ryrrrsvsel
      301 kse
//
LOCUS       XP_040944693             200 aa            linear   PLN 06-AUG-2024
DEFINITION  pathogenesis-related thaumatin-like protein 3.5 [Gossypium
            hirsutum].
ACCESSION   XP_040944693
VERSION     XP_040944693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088759.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="pathogenesis-related thaumatin-like protein 3.5"
                     /calculated_mol_wt=20449
     Region          28..>200
                     /region_name="GH64-TLP-SF"
                     /note="glycoside hydrolase family 64 (beta-1,3-glucanases
                     which produce specific pentasaccharide oligomers) and
                     thaumatin-like proteins; cl02511"
                     /db_xref="CDD:470598"
     CDS             1..200
                     /gene="LOC107910171"
                     /coded_by="XM_041088759.1:178..780"
                     /db_xref="GeneID:107910171"
ORIGIN      
        1 maipftvyll flfnllafgt lfssatlftv qnhcsftiwp aslsgngasl gnggfelssg
       61 ssaqfqappg wsgrfwgrtg ckfdnsgsgk citgdcggil nctfggvppv tlveftiagg
      121 stdnkdfydv slvdgynval gvkavggsgd cqnagcvtdl nancpvelrv ldsgsvvack
      181 sactafntpe fcctgdhatp
//
LOCUS       XP_016693436             224 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693436
VERSION     XP_016693436.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837947.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..224
                     /product="uncharacterized protein"
                     /calculated_mol_wt=24737
     Region          164..217
                     /region_name="SAP30_Sin3_bdg"
                     /note="Sin3 binding region of histone deacetylase complex
                     subunit SAP30; pfam13867"
                     /db_xref="CDD:464006"
     CDS             1..224
                     /gene="LOC107910170"
                     /coded_by="XM_016837947.2:466..1140"
                     /db_xref="GeneID:107910170"
ORIGIN      
        1 mleamessvn gggfsqfqsc gdsseeelsv lprhtkvvvt gnnrtksvlv glqgvvkkav
       61 glggwhwlvl tngievklqr nalsvieapt gneedddlef enmqwngsdm asddthkshr
      121 srhrthkstg sshktmsrsf scdsqskgsv stprgstkvd lsklemaalw rywrhfnlvd
      181 aipnpskeql vdvvqrhfvs qqmdelqviv gfvqaakrlk tvck
//
LOCUS       XP_016693435             313 aa            linear   PLN 06-AUG-2024
DEFINITION  protein BRASSINAZOLE-RESISTANT 1 [Gossypium hirsutum].
ACCESSION   XP_016693435
VERSION     XP_016693435.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837946.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..313
                     /product="protein BRASSINAZOLE-RESISTANT 1"
                     /calculated_mol_wt=34201
     Region          33..134
                     /region_name="BES1_N"
                     /note="BES1/BZR1 plant transcription factor, N-terminal;
                     pfam05687"
                     /db_xref="CDD:461715"
     CDS             1..313
                     /gene="LOC107910168"
                     /coded_by="XM_016837946.2:296..1237"
                     /db_xref="GeneID:107910168"
ORIGIN      
        1 mtsdgatstp aprrkpswre rennrrrerr rraiaakiyt glraqgnynl pkhcdnnevl
       61 kalcseagwv veddgttyrk gckpppidig gssskitpfs sqnpsplssa fpspipscqv
      121 spssssypsp trfdannpst llpflrnaip sslpplrisn sapvtpplss ptsrnpkplp
      181 nwetiakesm asfnypfyav sapaspthrh fhapatipec desdtstves gqwisfqkfa
      241 pstsqvptsp tffklvkhlp pqnlhndlgv kdkgrgaefe fesghlkpwe gerihdigmd
      301 dleltlgsgk pqc
//
LOCUS       XP_016693433              56 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693433
VERSION     XP_016693433.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837944.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..56
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7128
     Region          1..47
                     /region_name="SPT_ssu-like"
                     /note="Small subunit of serine palmitoyltransferase-like;
                     pfam11779"
                     /db_xref="CDD:463347"
     CDS             1..56
                     /gene="LOC107910167"
                     /coded_by="XM_016837944.2:172..342"
                     /db_xref="GeneID:107910167"
ORIGIN      
        1 mnwvqrkiyl ynvtfglyml dwwerylfnt lvivlmwfif ynssryvtef ykrhls
//
LOCUS       XP_016693434              56 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693434
VERSION     XP_016693434.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837945.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..56
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7128
     Region          1..47
                     /region_name="SPT_ssu-like"
                     /note="Small subunit of serine palmitoyltransferase-like;
                     pfam11779"
                     /db_xref="CDD:463347"
     CDS             1..56
                     /gene="LOC107910167"
                     /coded_by="XM_016837945.2:154..324"
                     /db_xref="GeneID:107910167"
ORIGIN      
        1 mnwvqrkiyl ynvtfglyml dwwerylfnt lvivlmwfif ynssryvtef ykrhls
//
LOCUS       XP_016693431             397 aa            linear   PLN 06-AUG-2024
DEFINITION  COP9 signalosome complex subunit 4 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693431
VERSION     XP_016693431.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837942.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..397
                     /product="COP9 signalosome complex subunit 4 isoform X1"
                     /calculated_mol_wt=45174
     Region          <98..374
                     /region_name="RPN5"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5071"
                     /db_xref="CDD:227403"
     Region          267..362
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..397
                     /gene="LOC107910166"
                     /coded_by="XM_016837942.2:127..1320"
                     /db_xref="GeneID:107910166"
ORIGIN      
        1 mesalanase iidqrqkieq ykhilstvfs sndivqakkf idhmlsddvp lvvsrqllqt
       61 faqelgrlep eaqkeiahyt laqiqprvvs feeqvliire klaelyeseq qwskaaqmls
      121 gidldsgmrv iddtfrlskc vqiarlyled ddsvnaeafi nkasflvsns qhevlilqyk
      181 vcyarildlk rkfleaalry ydisqiekrq igdetideda leqalsaavt ctilagagpq
      241 rsrvlatlyk dercsklkiy pilrkvyler ilrkpeidaf aeelkphqka llpdnftvld
      301 ramiehnlls asklytnisf delgtllgip phkaekiasr miyedrmrgs idqveavihf
      361 eddteelqqw dqqivgvcqa lndildsmak kgmavpv
//
LOCUS       XP_016693432             354 aa            linear   PLN 06-AUG-2024
DEFINITION  COP9 signalosome complex subunit 4 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693432
VERSION     XP_016693432.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837943.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..354
                     /product="COP9 signalosome complex subunit 4 isoform X2"
                     /calculated_mol_wt=40392
     Region          <98..353
                     /region_name="RPN5"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5071"
                     /db_xref="CDD:227403"
     Region          267..353
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..354
                     /gene="LOC107910166"
                     /coded_by="XM_016837943.2:127..1191"
                     /db_xref="GeneID:107910166"
ORIGIN      
        1 mesalanase iidqrqkieq ykhilstvfs sndivqakkf idhmlsddvp lvvsrqllqt
       61 faqelgrlep eaqkeiahyt laqiqprvvs feeqvliire klaelyeseq qwskaaqmls
      121 gidldsgmrv iddtfrlskc vqiarlyled ddsvnaeafi nkasflvsns qhevlilqyk
      181 vcyarildlk rkfleaalry ydisqiekrq igdetideda leqalsaavt ctilagagpq
      241 rsrvlatlyk dercsklkiy pilrkvyler ilrkpeidaf aeelkphqka llpdnftvld
      301 ramiehnlls asklytnisf delgtllgip phkaekiasr miyedrmrgs idqn
//
LOCUS       XP_016691009             235 aa            linear   PLN 06-AUG-2024
DEFINITION  outer envelope pore protein 24B, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016691009
VERSION     XP_016691009.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835520.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..235
                     /product="outer envelope pore protein 24B, chloroplastic"
                     /calculated_mol_wt=26856
     CDS             1..235
                     /gene="LOC107908320"
                     /coded_by="XM_016835520.2:103..810"
                     /db_xref="GeneID:107908320"
ORIGIN      
        1 mqtyktefrq llplylpsly lpremkaslk grytndksta vvtlavnagd vkllasmsdv
       61 tvvkgprlnn ltltvekpaf fifdydvpkk dfrfqfmnsi kvaekplklt ynhghgenrt
      121 vmdgslvlds ankvsvnymf gtrnfklkys ylhggvttye pcydlgknaw dfsvsrrlyd
      181 dvfkatyesw srdfalewsr nskfngtfki satinmvges kipkvfaest wdlem
//
LOCUS       XP_016693451             779 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693451
VERSION     XP_016693451.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837962.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..779
                     /product="uncharacterized protein"
                     /calculated_mol_wt=88137
     CDS             1..779
                     /gene="LOC107910185"
                     /coded_by="XM_016837962.2:537..2876"
                     /db_xref="GeneID:107910185"
ORIGIN      
        1 mnvmkvkset edfdcnsddf gldnvvlkwi kdrcetkkrk rfnfvglnke tletcssvkl
       61 espnfqhngd ihdeledpli gwkselfkni kssdedllel nrdwpapidv kvevpeseta
      121 nvnilktdvp yptmephycs lnevsyeyte dsetrldvgl sgcetkepqy cslnevsyey
      181 tedsetrldm glsgcetkep qycslnevsy eymedsetrl dvglsgaetk epqycclnev
      241 syeyrenfet kfdvgvsswe ivqvhspenn ayfglsgyre edytihplsy dvsseqmspi
      301 kdyscdvcds cqnespkpem pwqtsrdsli liletniasd tetgvslspv kcsvsngvsy
      361 estedvapks garffscetv kvdspemisy lcadlqefgk dsytvdplty avpselvspt
      421 kdhctdlhds fnssehkmss qtsnrgraem pemdtdncfq cletnnedsa csfesrsthy
      481 wssnirnivv spstdnglyw sssclkhekh sglvsadsss skkqpqspal iarnyfdasg
      541 kplaspapqd yhqmkhqhsa ervlsgrkai sptsrerlcr amrltglden echqyrgkqs
      601 hhrtlraqgl dhiwkdgvai kptstmrkak qdkkespmkg slkgtyppqc rsqsviaftq
      661 rqmqdfqsla mklttelksm knlvkgkfqs easvatsane nadevrvaie natraeeyar
      721 rwlsiltrdc nrfckimslt edntaasdrv ikkerkvsfa deaggmpmyf kndrhspwn
//
LOCUS       XP_016693453             203 aa            linear   PLN 06-AUG-2024
DEFINITION  7-methyl-GTP pyrophosphatase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693453
VERSION     XP_016693453.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837964.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..203
                     /product="7-methyl-GTP pyrophosphatase isoform X1"
                     /calculated_mol_wt=22643
     Region          10..180
                     /region_name="Maf_Ham1"
                     /note="Maf, a nucleotide binding protein, has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea. A Ham1-related protein
                     from Methanococcus jannaschii is a novel NTPase that has
                     been shown to hydrolyze nonstandard nucleotides; cl00276"
                     /db_xref="CDD:469702"
     Site            order(14,19,39,58,84)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238351"
     CDS             1..203
                     /gene="LOC107910188"
                     /coded_by="XM_016837964.2:122..733"
                     /db_xref="GeneID:107910188"
ORIGIN      
        1 medktsqfki ilgssslprr kiltemgyef tlmsadidek girkekpeel vmalaeakad
       61 ailqrlpvsd yvkeaeptll itsdqvvvye gvirekpane eeahqfikgy sgghaatvgs
      121 vlvtnlktgf rkgewdrvei hfheipdevi eklieegnvl hvaggllieh plikpyikqv
      181 prhyrqtfpk lvllslglsp ayg
//
LOCUS       XP_016693452             203 aa            linear   PLN 06-AUG-2024
DEFINITION  7-methyl-GTP pyrophosphatase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693452
VERSION     XP_016693452.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837963.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..203
                     /product="7-methyl-GTP pyrophosphatase isoform X2"
                     /calculated_mol_wt=22426
     Region          10..198
                     /region_name="Maf_Ham1"
                     /note="Maf, a nucleotide binding protein, has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea. A Ham1-related protein
                     from Methanococcus jannaschii is a novel NTPase that has
                     been shown to hydrolyze nonstandard nucleotides; cl00276"
                     /db_xref="CDD:469702"
     Site            order(14,19,39,58,84)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238351"
     CDS             1..203
                     /gene="LOC107910188"
                     /coded_by="XM_016837963.2:276..887"
                     /db_xref="GeneID:107910188"
ORIGIN      
        1 medktsqfki ilgssslprr kiltemgyef tlmsadidek girkekpeel vmalaeakad
       61 ailqrlpvsd yvkeaeptll itsdqvvvye gvirekpane eeahqfikgy sgghaatvgs
      121 vlvtnlktgf rkgewdrvei hfheipdevi eklieegnvl hvaggllieh plikpyikqv
      181 vgtidsvmgl pkapteklik eav
//
LOCUS       XP_016693454             179 aa            linear   PLN 06-AUG-2024
DEFINITION  7-methyl-GTP pyrophosphatase isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693454
VERSION     XP_016693454.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837965.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="7-methyl-GTP pyrophosphatase isoform X3"
                     /calculated_mol_wt=19688
     Region          10..174
                     /region_name="Maf_Ham1"
                     /note="Maf, a nucleotide binding protein, has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea. A Ham1-related protein
                     from Methanococcus jannaschii is a novel NTPase that has
                     been shown to hydrolyze nonstandard nucleotides; cl00276"
                     /db_xref="CDD:469702"
     CDS             1..179
                     /gene="LOC107910188"
                     /coded_by="XM_016837965.2:122..661"
                     /db_xref="GeneID:107910188"
ORIGIN      
        1 medktsqfks adidekgirk ekpeelvmal aeakadailq rlpvsdyvke aeptllitsd
       61 qvvvyegvir ekpaneeeah qfikgysggh aatvgsvlvt nlktgfrkge wdrveihfhe
      121 ipdeviekli eegnvlhvag glliehplik pyikqvvgti dsvmglpkap teklikeav
//
LOCUS       XP_040944694             179 aa            linear   PLN 06-AUG-2024
DEFINITION  7-methyl-GTP pyrophosphatase isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944694
VERSION     XP_040944694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088760.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="7-methyl-GTP pyrophosphatase isoform X4"
                     /calculated_mol_wt=19905
     Region          10..156
                     /region_name="Maf_Ham1"
                     /note="Maf, a nucleotide binding protein, has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea. A Ham1-related protein
                     from Methanococcus jannaschii is a novel NTPase that has
                     been shown to hydrolyze nonstandard nucleotides; cl00276"
                     /db_xref="CDD:469702"
     CDS             1..179
                     /gene="LOC107910188"
                     /coded_by="XM_041088760.1:122..661"
                     /db_xref="GeneID:107910188"
ORIGIN      
        1 medktsqfks adidekgirk ekpeelvmal aeakadailq rlpvsdyvke aeptllitsd
       61 qvvvyegvir ekpaneeeah qfikgysggh aatvgsvlvt nlktgfrkge wdrveihfhe
      121 ipdeviekli eegnvlhvag glliehplik pyikqvprhy rqtfpklvll slglspayg
//
LOCUS       XP_016693455             178 aa            linear   PLN 06-AUG-2024
DEFINITION  7-methyl-GTP pyrophosphatase isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016693455
VERSION     XP_016693455.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837966.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..178
                     /product="7-methyl-GTP pyrophosphatase isoform X5"
                     /calculated_mol_wt=19566
     Region          1..173
                     /region_name="Maf_Ham1"
                     /note="Maf, a nucleotide binding protein, has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea. A Ham1-related protein
                     from Methanococcus jannaschii is a novel NTPase that has
                     been shown to hydrolyze nonstandard nucleotides; cl00276"
                     /db_xref="CDD:469702"
     CDS             1..178
                     /gene="LOC107910188"
                     /coded_by="XM_016837966.2:191..727"
                     /db_xref="GeneID:107910188"
ORIGIN      
        1 mgyeftlmsa didekgirke kpeelvmala eakadailqr lpvsdyvkea eptllitsdq
       61 vvvyegvire kpaneeeahq fikgysggha atvgsvlvtn lktgfrkgew drveihfhei
      121 pdevieklie egnvlhvagg lliehplikp yikqvvgtid svmglpkapt eklikeav
//
LOCUS       XP_016693456             515 aa            linear   PLN 06-AUG-2024
DEFINITION  3-ketoacyl-CoA synthase 4 [Gossypium hirsutum].
ACCESSION   XP_016693456
VERSION     XP_016693456.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837967.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..515
                     /product="3-ketoacyl-CoA synthase 4"
                     /calculated_mol_wt=57192
     Region          21..514
                     /region_name="PLN02377"
                     /note="3-ketoacyl-CoA synthase"
                     /db_xref="CDD:166018"
     CDS             1..515
                     /gene="LOC107910190"
                     /coded_by="XM_016837967.2:514..2061"
                     /db_xref="GeneID:107910190"
ORIGIN      
        1 mnqggvattn ggsgsgsvgv riqqsrslpd flqsvnlkyv klgyhylisn lltlcfipai
       61 aalsiqvsqm nlddlrqlwl hlqynlvsii icsailvfgl tvyimtrprp vylvdyscyr
      121 ppdhlkapyg rflehsrltg dfdesslefq rkilersglg eetyvpkamh sipptpsmaa
      181 areeaeevmf galdtlfrnt nvspkdigil vvncslfnpt pslsamivnk yklrgnirsf
      241 nlggmgcsag viavdlakdl lqvhrntyav vvstenitqn wyfgnnksml ipnclfrvgg
      301 savllsnksn drrrakykli hvvrthrgad dkafrcvyqe qddagktgvs lskdlmaiag
      361 galktnittl gplvlpiseq llffttlvvk klfnasvkpy ipdfklafdh fcihaggrav
      421 ideleknlql lpihveasrm tlhrfgntss ssiwyelayi eakgrirnrn riwqiafgsg
      481 fkcnsavwqa lrnvkpssng pwedcidkyp vkiss
//
LOCUS       XP_016693457             487 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693457
VERSION     XP_016693457.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837968.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..487
                     /product="sugar transporter ERD6-like 6 isoform X1"
                     /calculated_mol_wt=52722
     Region          51..481
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(62,66,180,183..184,187,294..295,299..300,303..304,
                     329,398..399,402..403,407,430..431,434)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..487
                     /gene="LOC107910191"
                     /coded_by="XM_016837968.2:241..1704"
                     /db_xref="GeneID:107910191"
ORIGIN      
        1 msfrddsedg rdvrkpflht gswyrmgsrt gssmlgssqv irdssisvva cvlivalgpi
       61 qfgftngyss ptqsaiikel gltvseysvf gslsnvgami gavvsgqmae yigrkgslmi
      121 aaipniigwl aisfandvsf lymgrllegf gvgiisytvp vyiaeiapen lrgslgsvnq
      181 lsvtigtmva yllglfvgwr ilailgilpc tilipglffi pesprwlakm gmtedfeasl
      241 qvlrgfdtdi sievneikrs vasttrrtti rfaelkkrry wfplmvgigl lmlqqlggin
      301 gvifysatif etagiksgni atfgvgfiqv iatalttwlv dktgrrllli vstsgitlsl
      361 llvalsfflk dvvstessly simgilsvvg vvtlvitfsl gmgpipwiim seilpvsikg
      421 lagsiatlsn wfsawlvtmt anllldwnsg gtftiymlvs aftilfvslw vpetkgrtle
      481 eiqrsfr
//
LOCUS       XP_016693459             487 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693459
VERSION     XP_016693459.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837970.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..487
                     /product="sugar transporter ERD6-like 6 isoform X1"
                     /calculated_mol_wt=52722
     Region          51..481
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(62,66,180,183..184,187,294..295,299..300,303..304,
                     329,398..399,402..403,407,430..431,434)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..487
                     /gene="LOC107910191"
                     /coded_by="XM_016837970.2:218..1681"
                     /db_xref="GeneID:107910191"
ORIGIN      
        1 msfrddsedg rdvrkpflht gswyrmgsrt gssmlgssqv irdssisvva cvlivalgpi
       61 qfgftngyss ptqsaiikel gltvseysvf gslsnvgami gavvsgqmae yigrkgslmi
      121 aaipniigwl aisfandvsf lymgrllegf gvgiisytvp vyiaeiapen lrgslgsvnq
      181 lsvtigtmva yllglfvgwr ilailgilpc tilipglffi pesprwlakm gmtedfeasl
      241 qvlrgfdtdi sievneikrs vasttrrtti rfaelkkrry wfplmvgigl lmlqqlggin
      301 gvifysatif etagiksgni atfgvgfiqv iatalttwlv dktgrrllli vstsgitlsl
      361 llvalsfflk dvvstessly simgilsvvg vvtlvitfsl gmgpipwiim seilpvsikg
      421 lagsiatlsn wfsawlvtmt anllldwnsg gtftiymlvs aftilfvslw vpetkgrtle
      481 eiqrsfr
//
LOCUS       XP_040944695             487 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944695
VERSION     XP_040944695.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088761.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..487
                     /product="sugar transporter ERD6-like 6 isoform X1"
                     /calculated_mol_wt=52722
     Region          51..481
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(62,66,180,183..184,187,294..295,299..300,303..304,
                     329,398..399,402..403,407,430..431,434)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..487
                     /gene="LOC107910191"
                     /coded_by="XM_041088761.1:93..1556"
                     /db_xref="GeneID:107910191"
ORIGIN      
        1 msfrddsedg rdvrkpflht gswyrmgsrt gssmlgssqv irdssisvva cvlivalgpi
       61 qfgftngyss ptqsaiikel gltvseysvf gslsnvgami gavvsgqmae yigrkgslmi
      121 aaipniigwl aisfandvsf lymgrllegf gvgiisytvp vyiaeiapen lrgslgsvnq
      181 lsvtigtmva yllglfvgwr ilailgilpc tilipglffi pesprwlakm gmtedfeasl
      241 qvlrgfdtdi sievneikrs vasttrrtti rfaelkkrry wfplmvgigl lmlqqlggin
      301 gvifysatif etagiksgni atfgvgfiqv iatalttwlv dktgrrllli vstsgitlsl
      361 llvalsfflk dvvstessly simgilsvvg vvtlvitfsl gmgpipwiim seilpvsikg
      421 lagsiatlsn wfsawlvtmt anllldwnsg gtftiymlvs aftilfvslw vpetkgrtle
      481 eiqrsfr
//
LOCUS       XP_040944696             465 aa            linear   PLN 06-AUG-2024
DEFINITION  sugar transporter ERD6-like 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944696
VERSION     XP_040944696.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088762.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..465
                     /product="sugar transporter ERD6-like 6 isoform X2"
                     /calculated_mol_wt=50486
     Region          51..459
                     /region_name="MFS_GLUT6_8_Class3_like"
                     /note="Glucose transporter (GLUT) types 6 and 8, Class 3
                     GLUTs, and similar transporters of the Major Facilitator
                     Superfamily; cd17358"
                     /db_xref="CDD:340916"
     Site            order(62,66,180,183..184,187,294..295,299..300,303..304,
                     329,376..377,380..381,385,408..409,412)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340916"
     CDS             1..465
                     /gene="LOC107910191"
                     /coded_by="XM_041088762.1:242..1639"
                     /db_xref="GeneID:107910191"
ORIGIN      
        1 msfrddsedg rdvrkpflht gswyrmgsrt gssmlgssqv irdssisvva cvlivalgpi
       61 qfgftngyss ptqsaiikel gltvseysvf gslsnvgami gavvsgqmae yigrkgslmi
      121 aaipniigwl aisfandvsf lymgrllegf gvgiisytvp vyiaeiapen lrgslgsvnq
      181 lsvtigtmva yllglfvgwr ilailgilpc tilipglffi pesprwlakm gmtedfeasl
      241 qvlrgfdtdi sievneikrs vasttrrtti rfaelkkrry wfplmvgigl lmlqqlggin
      301 gvifysatif etagiksgni atfgvgfiqv iatalttwlv dktgrrllli vstsgitlsl
      361 llvalsfflk tlvitfslgm gpipwiimse ilpvsikgla gsiatlsnwf sawlvtmtan
      421 llldwnsggt ftiymlvsaf tilfvslwvp etkgrtleei qrsfr
//
LOCUS       XP_040944697             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944697
VERSION     XP_040944697.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088763.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14070
     CDS             1..136
                     /gene="LOC121214708"
                     /coded_by="XM_041088763.1:250..660"
                     /db_xref="GeneID:121214708"
ORIGIN      
        1 medaasplsn wkgygilspq esmplenspa pryprdfgpg trglidrggl fpidppianp
       61 rplgprtsal tneggspema idegglvaqn patnmpideg glythnlttd ttsdeeghav
      121 dvagegegeg egesen
//
LOCUS       XP_040944698             745 aa            linear   PLN 06-AUG-2024
DEFINITION  translation initiation factor IF-2 [Gossypium hirsutum].
ACCESSION   XP_040944698
VERSION     XP_040944698.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088764.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..745
                     /product="translation initiation factor IF-2"
                     /calculated_mol_wt=81145
     Region          <12..197
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          444..674
                     /region_name="NmrA"
                     /note="NmrA-like family; pfam05368"
                     /db_xref="CDD:398829"
     Site            order(448,450..451,453,473,520..522,525..526,548..551,570,
                     590..592,596)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187569"
     Site            570
                     /site_type="active"
                     /note="active site lysine"
                     /db_xref="CDD:187569"
     CDS             1..745
                     /gene="LOC107910193"
                     /coded_by="XM_041088764.1:58..2295"
                     /db_xref="GeneID:107910193"
ORIGIN      
        1 mgeqrqffrf rlpwlsaaaa prpvatprpa aepqpqsqap sqptvsipiq rppfrpagit
       61 pvrtpsiqvq pppppppkte pqpvpsrekv qtrpqshtpt paraaamasa riapqpavpk
      121 qespprlasq ptgqtssqpp spsrratqvq tlspprrstm atqvasqpps stqptfkpfg
      181 vavkpseesn qlkdvapita aakekpkeme irkkvgeerr kgtkkgsthe epttvttklv
      241 aaaseagtkt rellgavlek gkghlekqed terkntltss ssderqikta sstypkggsr
      301 psnshetnvd skseqvplhk eirediskfv halvtgkpkl htdeksvniv tlagensgas
      361 frcisesttk dgegrskgrk pvgsvikddv aqkayvnsnt qsinnsimle srlegrnpgv
      421 hleffddake lrqkhssmag kskvlviggt gyigkfivea svkeghptfa lvregsvsdp
      481 vkgkvinnfk nlgvhllygd lydheslvka ikqadvvisa vgsmqladqv kiiaaikeag
      541 nvkrffpsef gndvdrvhav epaktafatk aqirraieae gipytyvssn cfagyflpdl
      601 sqpgattppr nkvvipgdgd pkavfnhesd igtytikavd dprtlnkily irppkntysf
      661 neivalwekl igktlektyv pedqllkqik eatfpysvgl airhsvfvrg dhtnfeieps
      721 fgveaselyp dvkyttveey lsrlv
//
LOCUS       XP_040944699             102 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944699
VERSION     XP_040944699.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088765.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..102
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11236
     CDS             1..102
                     /gene="LOC121214709"
                     /coded_by="XM_041088765.1:126..434"
                     /db_xref="GeneID:121214709"
ORIGIN      
        1 msgrifvvif fswtaltiit ptlvlwsess qhnfefnlkg tegikghrki igygekqvgn
       61 gtisvsrlea ateqqkwscl lefggwvikv lrkamgflsg sd
//
LOCUS       XP_016693461             127 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693461
VERSION     XP_016693461.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837972.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..127
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=14313
     CDS             1..127
                     /gene="LOC107910194"
                     /coded_by="XM_016837972.2:609..992"
                     /db_xref="GeneID:107910194"
ORIGIN      
        1 mdlktgeedn gikapkkqng legggnskmk gnesisgkdm ifradqidlk sldmqlekhl
       61 srvwsrniek qrpaeeweid lakldlrnvi ahgtygtfyr atydsqdvad qeeqnmgldr
      121 gkkkved
//
LOCUS       XP_016693462             117 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693462
VERSION     XP_016693462.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837973.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..117
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=13053
     CDS             1..117
                     /gene="LOC107910194"
                     /coded_by="XM_016837973.2:609..962"
                     /db_xref="GeneID:107910194"
ORIGIN      
        1 mdlktgeedn gikapkkqng legggnskmk gnesisgkdm ifradqidlk sldmqlekhl
       61 srvwsrniek qrpaeeweid lakldlrnvi ahgtygtfyr atydsqdvag irarlss
//
LOCUS       XP_016693463             113 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693463
VERSION     XP_016693463.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837974.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..113
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=12639
     Region          78..>110
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..113
                     /gene="LOC107910194"
                     /coded_by="XM_016837974.2:915..1256"
                     /db_xref="GeneID:107910194"
ORIGIN      
        1 mdlktgeedn gikapkkqng legggnskmk gnesisgkdm ifradqidlk sldmqlekhl
       61 srvwsrniek qrpaeeweid lakldlrnvi ahgtygtfyr atydsqdvav lqs
//
LOCUS       XP_016693465             607 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: phosphatidylinositol/phosphatidylcholine
            transfer protein SFH8 [Gossypium hirsutum].
ACCESSION   XP_016693465
VERSION     XP_016693465.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837976.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693465.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..607
                     /product="LOW QUALITY PROTEIN:
                     phosphatidylinositol/phosphatidylcholine transfer protein
                     SFH8"
                     /calculated_mol_wt=68625
     Region          81..127
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          147..317
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..607
                     /gene="LOC107910197"
                     /coded_by="XM_016837976.2:268..2091"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107910197"
ORIGIN      
        1 msgpldrfar pcfegnnder kdrksdfeis eddkktrign lkkkamkass kfrrslkkks
       61 srrksdlsvs ikdvrdieel qaveafrqal isdqllpsrh ddyhmllrfl karkfdieka
      121 khmwdnmlqw rkdfgtdtil edfdfnelde vlkyypqgyh gxdkegrpvy ieligkvvpd
      181 klmrvttler yvryhvqefe kcfatkfpac siaakrhids nttildvqgm glknfsksaq
      241 dlvrclqkid gdnypetlcr mfiinagsgf kmawkavksc ldsktaskin vlgsnyqskl
      301 leiidaselp qflggsctca dqggcmrsdk gpwkdpnilk miangealys rqivtvsnse
      361 grikssdtst aesgseveei vspmptksyl hpllapvsee armagkavsa agslecdeyv
      421 pmidkvvdse ceiqvsshqs pftsegtpma lvehtpkgiy ghitalvisf ltlfsiirtm
      481 vlhlmkkssv sdltcnipdq hvestfkdet rppspaprft evdlvssvvr rlgdleekve
      541 mlqskrfemp hekeellnaa vcrvdaleae listkkalhe awmrqeella yidskeeakf
      601 rkkkfcw
//
LOCUS       XP_016693466             331 aa            linear   PLN 06-AUG-2024
DEFINITION  bifunctional nuclease 1 [Gossypium hirsutum].
ACCESSION   XP_016693466
VERSION     XP_016693466.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837977.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693466.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..331
                     /product="bifunctional nuclease 1"
                     /calculated_mol_wt=37190
     Region          142..248
                     /region_name="BFN_dom"
                     /note="Bifunctional nuclease domain; pfam02577"
                     /db_xref="CDD:426845"
     CDS             1..331
                     /gene="LOC107910198"
                     /coded_by="XM_016837977.2:385..1380"
                     /db_xref="GeneID:107910198"
ORIGIN      
        1 mvslqgpvic pavrskqfgv ymppangpfp raklyrsdiw gyrgitdgkn karaifrqlk
       61 lrkcrttvqc sfssssdgng smaenfnend edyvnssvle avevrsgadg fmikmrdgrh
      121 lrcvhnnpqg ghlpdyaphp aivlkmedgt glllpiivle mpsvllmaav rnvqiarptm
      181 yqvvkdmidk mgytvklvrv tkrvheayfa qlyltkvgde sksvifdlrp sdainiavrc
      241 kvsiqvnkyl aysdgmrvie sgklsmqspa sngilfteld rpsgqhcldt eefnmvckln
      301 eainqerykd aadlrdklrk fraqrklrky t
//
LOCUS       XP_016693470             372 aa            linear   PLN 06-AUG-2024
DEFINITION  mitogen-activated protein kinase homolog NTF3 [Gossypium hirsutum].
ACCESSION   XP_016693470
VERSION     XP_016693470.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837981.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..372
                     /product="mitogen-activated protein kinase homolog NTF3"
                     /calculated_mol_wt=42538
     Region          26..361
                     /region_name="STKc_TEY_MAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Plant TEY Mitogen-Activated Protein Kinases; cd07858"
                     /db_xref="CDD:143363"
     Site            order(38..41,43..44,46,59,61,78,92,113..116,119,121..122,
                     158,160,162..163,165,175..176,179,191,193..196,198,236)
                     /site_type="active"
                     /db_xref="CDD:143363"
     Site            order(38..41,43..44,46,59,61,92,113..116,119,122,160,
                     162..163,165,175..176)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143363"
     Site            order(78,121,158,160,179,191,193..196,198,236)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143363"
     Site            order(89,117..118,123,134,137,144,166..170,322,324,327)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143363"
     Site            order(175..186,188..198)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143363"
     CDS             1..372
                     /gene="LOC107910200"
                     /coded_by="XM_016837981.2:574..1692"
                     /db_xref="GeneID:107910200"
ORIGIN      
        1 matpveppng ihyqgkhyys mwrtlfeidt kyvpikpigk gaygivcssv nretddkvai
       61 kkinnafdnp vdalrtlrel kllrhlrhen vialkdvmmp ihrrsfkdvy lvyelmdtdl
      121 hqiikspqal sndhcqyflf qllrglkylh sanilhrdlk pgnllinanc dlkicdfgla
      181 rtsnakgqfm teyvvtrwyr apelllccdn ygtsidvwsv gcifaellgr kpifpgtecl
      241 nqlkliinil gsqkeedlef idnpkarnyi kslpyshgip fsclypnahp laidllqkml
      301 vfdpskrigv tealqhpyma plydpncnpp aqvpidldid edlgeemire imwkemlyyh
      361 peaanangev cv
//
LOCUS       XP_016693471             142 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 11 [Gossypium hirsutum].
ACCESSION   XP_016693471
VERSION     XP_016693471.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837982.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693471.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..142
                     /product="bZIP transcription factor 11"
                     /calculated_mol_wt=16388
     Region          25..75
                     /region_name="bZIP_plant_GBF1"
                     /note="Basic leucine zipper (bZIP) domain of Plant G-box
                     binding factor 1 (GBF1)-like transcription factors: a
                     DNA-binding and dimerization domain; cd14702"
                     /db_xref="CDD:269850"
     Region          25..75
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269850"
     Site            order(28..29,31..33,35..40,42..44)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269850"
     Site            order(43,46..47,50..51,53..54,57..58,60..61,64..65,67..68,
                     71..72,74..75)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269850"
     CDS             1..142
                     /gene="LOC107910201"
                     /coded_by="XM_016837982.2:245..673"
                     /db_xref="GeneID:107910201"
ORIGIN      
        1 mascsgnsns nssgstqhql mdqrkrkrme snresarrsr mrkqkhiddl vgqitelkkd
       61 nnqiltsinf tthrylniea ensvlraqmt elsqrldsln dilhylnreg ieytpdcftn
      121 pfnvpylnqq ppimasahif qy
//
LOCUS       XP_016693472             435 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693472
VERSION     XP_016693472.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837983.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..435
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48003
     Region          275..328
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(276,279,302,304,307,310,325,328)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..435
                     /gene="LOC107910203"
                     /coded_by="XM_016837983.2:358..1665"
                     /db_xref="GeneID:107910203"
ORIGIN      
        1 mgsaccvaar ertlpkrtgv etlhrnttcs pswsfrwdsq rcvadeieep syqvsnrasr
       61 nvsmerkgtl gcgrrnisdq rnaleienye iptcqkfpir edmgrnmmtp ssdisrasny
      121 sievknlaes pdivdssapk lsfcipspps ppitktlsgh ipsnstpsrw arhspghrll
      181 rqvsdsrilg lkspnnysms egrssfvlst csndltagsh ggssdgwsmr tfselvassq
      241 rerwsfdseh sgsgdgkisg cssgvsysps igmrtcgacs kllaerssws cneisvvavl
      301 vcghvyhtec letmtpeadr ydpacpicmv gekqvskisr kalkaemelm akhlklfknr
      361 vkdsfadgdc ndfnhqqnak regkapklep sssrrsslak pflkrhfsig akwgrsvsen
      421 dsarkkgfwa rhrkd
//
LOCUS       XP_016693473             435 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693473
VERSION     XP_016693473.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837984.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..435
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48003
     Region          275..328
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(276,279,302,304,307,310,325,328)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..435
                     /gene="LOC107910203"
                     /coded_by="XM_016837984.2:329..1636"
                     /db_xref="GeneID:107910203"
ORIGIN      
        1 mgsaccvaar ertlpkrtgv etlhrnttcs pswsfrwdsq rcvadeieep syqvsnrasr
       61 nvsmerkgtl gcgrrnisdq rnaleienye iptcqkfpir edmgrnmmtp ssdisrasny
      121 sievknlaes pdivdssapk lsfcipspps ppitktlsgh ipsnstpsrw arhspghrll
      181 rqvsdsrilg lkspnnysms egrssfvlst csndltagsh ggssdgwsmr tfselvassq
      241 rerwsfdseh sgsgdgkisg cssgvsysps igmrtcgacs kllaerssws cneisvvavl
      301 vcghvyhtec letmtpeadr ydpacpicmv gekqvskisr kalkaemelm akhlklfknr
      361 vkdsfadgdc ndfnhqqnak regkapklep sssrrsslak pflkrhfsig akwgrsvsen
      421 dsarkkgfwa rhrkd
//
LOCUS       XP_016693474             398 aa            linear   PLN 06-AUG-2024
DEFINITION  26S proteasome regulatory subunit S10B homolog B [Gossypium
            hirsutum].
ACCESSION   XP_016693474
VERSION     XP_016693474.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837985.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="26S proteasome regulatory subunit S10B homolog
                     B"
                     /calculated_mol_wt=44453
     Region          23..396
                     /region_name="PRK03992"
                     /note="proteasome-activating nucleotidase; Provisional"
                     /db_xref="CDD:179699"
     CDS             1..398
                     /gene="LOC107910205"
                     /coded_by="XM_016837985.2:196..1392"
                     /db_xref="GeneID:107910205"
ORIGIN      
        1 msdgedavrr hnaiaeyrkk llqhkeyesr vragrenlra akkefnkted dlkslqsvgq
       61 iigevlrpld nerlivkass gpryvvgcrs kvdkekltsg trvvldmttl timralprev
      121 dpvvynmlhe dpgnvsysav gglsdqirel resielplmn pelflrvgik ppkgvllygp
      181 pgtgktllar aiasnidanf lkvvssaiid kyigesarli remfgyardh qpciifmdei
      241 daiggrrfse gtsadreiqr tlmellnqld gfdqlgkvkm imatnrpdvl dpallrpgrl
      301 drkieiplpn eqsrmeilki haagiakhge idyeavvkla egfngadlrn vcteagmsai
      361 raerdyvihe dfmkavrkln eakklessah ystdfgke
//
LOCUS       XP_016693475             115 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin H-type [Gossypium hirsutum].
ACCESSION   XP_016693475
VERSION     XP_016693475.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837986.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..115
                     /product="thioredoxin H-type"
                     /calculated_mol_wt=12666
     Region          18..108
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(39,42)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..115
                     /gene="LOC107910206"
                     /coded_by="XM_016837986.2:217..564"
                     /db_xref="GeneID:107910206"
ORIGIN      
        1 maeegqlinc qtfaswneql haanasmkla vvsftaswcg acrfitpvvv elakklpdvi
       61 flkvdaddlk tvtrdfavea lptfifmkqg kivdkvlgar kdelqqkitl hmlka
//
LOCUS       XP_016693476             269 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydration-responsive element-binding protein 2D isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693476
VERSION     XP_016693476.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837987.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693476.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="dehydration-responsive element-binding protein
                     2D isoform X1"
                     /calculated_mol_wt=29183
     Region          66..124
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(67..68,70,72,74,76,80,82,89,91,94)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..269
                     /gene="LOC107910207"
                     /coded_by="XM_016837987.2:95..904"
                     /db_xref="GeneID:107910207"
ORIGIN      
        1 mclsvinhfl sapfpysprf pvgtmstsmt gggfgerkqa rkpaqassrk gcmrgkggpe
       61 nalctykgvr qrtwgkwvae irepnrgarl wlgtfdtshe aamaydaaar klygsdakln
      121 lpelcannpq sqpssaanpq mapmvnyqpq nvsnsgmsmi ssssnnptir vndmtpipvy
      181 nndssvmpsf pnesialqgn mdakfgqite dgiegfwenm nanlplldds iwaetamsle
      241 fpmmgdpgsf asnlmeatgw dalqspwcm
//
LOCUS       XP_016693477             246 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydration-responsive element-binding protein 2D isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693477
VERSION     XP_016693477.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837988.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693477.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..246
                     /product="dehydration-responsive element-binding protein
                     2D isoform X2"
                     /calculated_mol_wt=26751
     Region          66..124
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(67..68,70,72,74,76,80,82,89,91,94)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..246
                     /gene="LOC107910207"
                     /coded_by="XM_016837988.2:97..837"
                     /db_xref="GeneID:107910207"
ORIGIN      
        1 mclsvinhfl sapfpysprf pvgtmstsmt gggfgerkqa rkpaqassrk gcmrgkggpe
       61 nalctykgvr qrtwgkwvae irepnrgarl wlgtfdtshe aamaydaaar klygsdakln
      121 lpelcannpq sqpssaanpq mapmvnyqpq nvsnsvynnd ssvmpsfpne sialqgnmda
      181 kfgqitedgi egfwenmnan lpllddsiwa etamslefpm mgdpgsfasn lmeatgwdal
      241 qspwcm
//
LOCUS       XP_016693478             239 aa            linear   PLN 06-AUG-2024
DEFINITION  dehydration-responsive element-binding protein 2D isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016693478
VERSION     XP_016693478.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837989.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693478.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..239
                     /product="dehydration-responsive element-binding protein
                     2D isoform X3"
                     /calculated_mol_wt=25972
     Region          66..124
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(67..68,70,72,74,76,80,82,89,91,94)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..239
                     /gene="LOC107910207"
                     /coded_by="XM_016837989.2:94..813"
                     /db_xref="GeneID:107910207"
ORIGIN      
        1 mclsvinhfl sapfpysprf pvgtmstsmt gggfgerkqa rkpaqassrk gcmrgkggpe
       61 nalctykgvr qrtwgkwvae irepnrgarl wlgtfdtshe aamaydaaar klygsdakln
      121 lpelcannpq sqpssaanpq mapmvnyqpq nvsnsvmpsf pnesialqgn mdakfgqite
      181 dgiegfwenm nanlplldds iwaetamsle fpmmgdpgsf asnlmeatgw dalqspwcm
//
LOCUS       XP_016693479             370 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine proteinase 15A [Gossypium hirsutum].
ACCESSION   XP_016693479
VERSION     XP_016693479.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837990.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="cysteine proteinase 15A"
                     /calculated_mol_wt=40345
     Region          55..110
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     smart00848"
                     /db_xref="CDD:214853"
     Region          138..362
                     /region_name="Peptidase_C1"
                     /note="Papain family cysteine protease; pfam00112"
                     /db_xref="CDD:425470"
     Site            order(156,162,305,332)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(213..214,280,303,306,358)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     CDS             1..370
                     /gene="LOC107910208"
                     /coded_by="XM_016837990.2:178..1290"
                     /db_xref="GeneID:107910208"
ORIGIN      
        1 mdrfsllfll lssvvasavv sdvnsdgdpl irqvvsdggv eedsddhlln aehhftlfks
       61 kygktyasqe ehdyrlgvfk anlrrakrhq lldpsavhgv tkfsdltpse frrqylglkp
      121 lklpadaqka pilptdnlpd dfdwrdhgav tgvkdqgscg scwsfsatga legahylatg
      181 elvslseqql vdcdhecdpq qygacdsgcn gglmtsafey tlkvgglere kdypytgndr
      241 gpckfdktki aasvsnfsvi svdedqiaan lvkhgplavg inavfmqtym ggvscpyicf
      301 rtldhgvllv gygaagyspi rfkdkpfwii knswganwge dgyykicrgr nvcgvdsmvs
      361 svaalhtksq
//
LOCUS       XP_016693480             204 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SHI RELATED SEQUENCE 5 [Gossypium hirsutum].
ACCESSION   XP_016693480
VERSION     XP_016693480.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837991.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..204
                     /product="protein SHI RELATED SEQUENCE 5"
                     /calculated_mol_wt=23172
     Region          82..202
                     /region_name="DUF702"
                     /note="Domain of unknown function (DUF702); pfam05142"
                     /db_xref="CDD:461560"
     CDS             1..204
                     /gene="LOC107910209"
                     /coded_by="XM_016837991.2:230..844"
                     /db_xref="GeneID:107910209"
ORIGIN      
        1 magffylggr qdedkeenln lyrneeicnk gfeiwphyny yqqqqnvnnq sfgagpsrrt
       61 sglnlsdews srsvgftdmr qggincqdcg nqakkdcahl rcrtcckshg fqcqthvkst
      121 wvpaarrrek qpqnpqqqqq frgenqglel aqfpsevnsp avfrcvkvna mdevdedqla
      181 yqtavniggh vfkgilydqg penh
//
LOCUS       XP_016694177             666 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane and coiled-coil domain-containing protein 4 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016694177
VERSION     XP_016694177.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838688.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..666
                     /product="transmembrane and coiled-coil domain-containing
                     protein 4 isoform X1"
                     /calculated_mol_wt=72038
     Region          289..639
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..666
                     /gene="LOC107910720"
                     /coded_by="XM_016838688.2:77..2077"
                     /db_xref="GeneID:107910720"
ORIGIN      
        1 meisllsstq kyaasalfav alhhsqlhqt rpttrllsle eepigegasn sstisvsdfp
       61 hlwihdnsgl llpvfrfmev edqaweglke tagvstqarh hvgsfmtlls etndevssgi
      121 rekelallka vdatmlsmes slvlsedsdk scdyethcrq rcaypdttta tdpngriprt
      181 tpnisnnedv dgsgfrffek pieegkllse erkltvlyel lsscvadyvt dggskgydar
      241 hrvalrllat wlnvkwtkme ameiivacnl ivrlknedae qfgkskndkw kqagiigasa
      301 ltggslvalt gglaapvvgh glgalaatlg sivpavgvgg falaasatgp isgsvavaas
      361 fgaagaglag srtviriedl defefiqtgl yhnqgrlavg ilisgiafee edflrpweny
      421 ndnleryvlk wesknlialn agimewitsk vasnllqgga mltvlstlla eeplpaalla
      481 asdlidsawa ivvdrsdkag kllaellisg lqghrpvtlv gfslgarvil kclqclaetq
      541 gdnaglverv vllgapipik dekwedarkm vagrfvnvyh tndwtlgiif rasvlstgla
      601 giqpvqlrgi envdateyve ghssylwmtk eilrqldvdn ynaifrttqq akplqdqtkq
      661 tnivfi
//
LOCUS       XP_016694178             615 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane and coiled-coil domain-containing protein 4 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016694178
VERSION     XP_016694178.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838689.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..615
                     /product="transmembrane and coiled-coil domain-containing
                     protein 4 isoform X2"
                     /calculated_mol_wt=67640
     Region          <325..588
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..615
                     /gene="LOC107910720"
                     /coded_by="XM_016838689.2:133..1980"
                     /db_xref="GeneID:107910720"
ORIGIN      
        1 meisllsstq kyaasalfav alhhsqlhqt rpttrllsle eepigegasn sstisvsdfp
       61 hlwihdnsgl llpvfrfmev edqaweglke tagvstqarh hvgsfmtlls etndevssgi
      121 rekelallka vdatmlsmes slvlsedsdk scdyethcrq rcaypdttta tdpngriprt
      181 tpnisnnedv dgsgfrffek pieegkllse erkltvlyel lsscvadyvt dggskgydar
      241 hrvalrllat wlnvkwtkme ameiivacnl ivrlknedae qfgkskndkw kqagiigasa
      301 ltggslvalt gaagaglags rtviriedld efefiqtgly hnqgrlavgi lisgiafeee
      361 dflrpwenyn dnleryvlkw esknlialna gimewitskv asnllqggam ltvlstllae
      421 eplpaallaa sdlidsawai vvdrsdkagk llaellisgl qghrpvtlvg fslgarvilk
      481 clqclaetqg dnaglvervv llgapipikd ekwedarkmv agrfvnvyht ndwtlgiifr
      541 asvlstglag iqpvqlrgie nvdateyveg hssylwmtke ilrqldvdny naifrttqqa
      601 kplqdqtkqt nivfi
//
LOCUS       XP_040944700             287 aa            linear   PLN 06-AUG-2024
DEFINITION  B-box zinc finger protein 21 [Gossypium hirsutum].
ACCESSION   XP_040944700
VERSION     XP_040944700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088766.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..287
                     /product="B-box zinc finger protein 21"
                     /calculated_mol_wt=31160
     Region          5..47
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          58..101
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     CDS             1..287
                     /gene="LOC107910721"
                     /coded_by="XM_041088766.1:192..1055"
                     /db_xref="GeneID:107910721"
ORIGIN      
        1 mkiqcdvcek eaasvfctad eaalcgacdh rvhhanklas khqrfsllhp ssskqvplcd
       61 icqekrgfvf cvqdrailck dcdvpihsan qytqkhdrfl ltgvklsats alydgdslpq
      121 fnsqklvndp fsvspasfnp ssaamtttat aavinknsgd nnllpsetca svssisdyli
      181 emlpgwhved fldsgfsksd dgllpfvdad lerntttfsp essglwvpqh spsslctphn
      241 ssqiggqtgw fketigikan rrwtddsftv pvitppstas krfrpls
//
LOCUS       XP_016694175            1767 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific histone demethylase 1 homolog 3 [Gossypium
            hirsutum].
ACCESSION   XP_016694175
VERSION     XP_016694175.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838686.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694175.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1767
                     /product="lysine-specific histone demethylase 1 homolog 3"
                     /calculated_mol_wt=192915
     Region          6..1759
                     /region_name="PLN02976"
                     /note="amine oxidase"
                     /db_xref="CDD:215527"
     CDS             1..1767
                     /gene="LOC107910719"
                     /coded_by="XM_016838686.2:374..5677"
                     /db_xref="GeneID:107910719"
ORIGIN      
        1 mdggggskkr lkvtavevgv dsdddepils llklrrpknp kkdkaglegs agkcqkvevk
       61 agktvdkdee dfggmndtla sfrkklkdpk kdidpgamrv rsnslnksve gggildgksv
      121 sntdvkgqdi gedrsdvatd kvvgkkrtgk vrrtksdska kpsevddesr akleedqneg
      181 glspgeglyq cshkaqsgsv gkscpifclk hnceaahhas dsknpsrncg dsshsvssss
      241 fshssskecn taenqgfdhs lyqqesilep gdltvqkdpt eypcrsskvc dkerychsni
      301 elrdnfsaid lrskpgtess qqnklnlsls vvdslkmeet ctdvpnscae eysletsihp
      361 nelvasiqrc nsalhqpsed aspgacgpih dtvfiskkan vdspistpde neschedavs
      421 lpsselknsk ssafqrggrn ikkrrhgdma yegdadwenl lteqgffgnq qfadsdhsfr
      481 arekfdeaai ssglkacavg pvekikfkev lkcrgglqey lecrnhilgl wskdvnrilp
      541 lvdcgvsdtp segepsrasl ireiyafldq ggyinfgiss kkekaelsvk dnykllegrk
      601 sdgnsvasva dsedgvafil gqvknskasm daktglrvvd enqaseatia iaevlvdsit
      661 pelpykcqqn gsfsaklntg lissqvsstd lscdatdvgv apvvtpeern dsqyvqsaty
      721 dkpdgnhqll ndsevrknii vigagpaglt aarhlkrqgf svvvleardr iggrvytdcs
      781 slsvpvdlga siitgveadv stnrrpdpss licaqlglel tvlnsscply divsgqkvpa
      841 dlddaleaey nsllddmvfl vaqkgkkamt msledgleya lkrhrmeeig adieeteshs
      901 svdafydska snifgfprkk cseeeilspl errvmnwhya hleygcaasl kevslpnwnq
      961 ddvyggfgga hcmikggyst vveslgegll ihlnhvvtni syspkgpgvd nshhrqvkvs
     1021 tsngsefsgd avlitvplgc lkagaikfsp plpqwkhssi qqlgfgvlnk vvlefpevfw
     1081 ddtvdyfgvt aeetdsrghc fmfwnvrktv gapvlialva gkaaidgqni sasdhvnhav
     1141 iilrklfgea svpdpvasvv tdwgrdpfsy gaysyvaiga sgedydmlar pvenclffag
     1201 eatckehpdt vggamlsglr eavrlidift tgndytaeve ameaaqrhse sgrdevrdii
     1261 krleavelsn vlyknsldra rilsreallr dmffnvktta grlhlakkll glpveslksf
     1321 agtkeglstl nswmldsmgk dgtqllrhcv rllvlvstdl lavrssgigk tvkekicvht
     1381 srdiraiasq lvnvwlevfr kakasskrks lkdpasgkpp lhsqhgafes keslqdpfsa
     1441 gkqyplnike ngksldieve avnqgmseee qaafaaeaaa raaakaaaea lasteancnk
     1501 llqlpkipsf hkfarreqya qmdegkwpgg vfgrqdcise idsrncrvrd wsvdfsaacv
     1561 nldnsgmsvd nlsqrshlkl rehsgeslav dssifmkawv dtagnggikd yhaierwqsq
     1621 aaaadpdffh ptnfkdeeds ntssrqptwk ndgranessv sqvsvnkerf enhphgadci
     1681 kqavvdyvas llmplykark idkegyksim kktatkvmeq atdaeknmav fefldfkrkn
     1741 kirpfvdkli erhmamkptm nydvvkd
//
LOCUS       XP_040944701            1767 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific histone demethylase 1 homolog 3 [Gossypium
            hirsutum].
ACCESSION   XP_040944701
VERSION     XP_040944701.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088767.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1767
                     /product="lysine-specific histone demethylase 1 homolog 3"
                     /calculated_mol_wt=192915
     Region          6..1759
                     /region_name="PLN02976"
                     /note="amine oxidase"
                     /db_xref="CDD:215527"
     CDS             1..1767
                     /gene="LOC107910719"
                     /coded_by="XM_041088767.1:478..5781"
                     /db_xref="GeneID:107910719"
ORIGIN      
        1 mdggggskkr lkvtavevgv dsdddepils llklrrpknp kkdkaglegs agkcqkvevk
       61 agktvdkdee dfggmndtla sfrkklkdpk kdidpgamrv rsnslnksve gggildgksv
      121 sntdvkgqdi gedrsdvatd kvvgkkrtgk vrrtksdska kpsevddesr akleedqneg
      181 glspgeglyq cshkaqsgsv gkscpifclk hnceaahhas dsknpsrncg dsshsvssss
      241 fshssskecn taenqgfdhs lyqqesilep gdltvqkdpt eypcrsskvc dkerychsni
      301 elrdnfsaid lrskpgtess qqnklnlsls vvdslkmeet ctdvpnscae eysletsihp
      361 nelvasiqrc nsalhqpsed aspgacgpih dtvfiskkan vdspistpde neschedavs
      421 lpsselknsk ssafqrggrn ikkrrhgdma yegdadwenl lteqgffgnq qfadsdhsfr
      481 arekfdeaai ssglkacavg pvekikfkev lkcrgglqey lecrnhilgl wskdvnrilp
      541 lvdcgvsdtp segepsrasl ireiyafldq ggyinfgiss kkekaelsvk dnykllegrk
      601 sdgnsvasva dsedgvafil gqvknskasm daktglrvvd enqaseatia iaevlvdsit
      661 pelpykcqqn gsfsaklntg lissqvsstd lscdatdvgv apvvtpeern dsqyvqsaty
      721 dkpdgnhqll ndsevrknii vigagpaglt aarhlkrqgf svvvleardr iggrvytdcs
      781 slsvpvdlga siitgveadv stnrrpdpss licaqlglel tvlnsscply divsgqkvpa
      841 dlddaleaey nsllddmvfl vaqkgkkamt msledgleya lkrhrmeeig adieeteshs
      901 svdafydska snifgfprkk cseeeilspl errvmnwhya hleygcaasl kevslpnwnq
      961 ddvyggfgga hcmikggyst vveslgegll ihlnhvvtni syspkgpgvd nshhrqvkvs
     1021 tsngsefsgd avlitvplgc lkagaikfsp plpqwkhssi qqlgfgvlnk vvlefpevfw
     1081 ddtvdyfgvt aeetdsrghc fmfwnvrktv gapvlialva gkaaidgqni sasdhvnhav
     1141 iilrklfgea svpdpvasvv tdwgrdpfsy gaysyvaiga sgedydmlar pvenclffag
     1201 eatckehpdt vggamlsglr eavrlidift tgndytaeve ameaaqrhse sgrdevrdii
     1261 krleavelsn vlyknsldra rilsreallr dmffnvktta grlhlakkll glpveslksf
     1321 agtkeglstl nswmldsmgk dgtqllrhcv rllvlvstdl lavrssgigk tvkekicvht
     1381 srdiraiasq lvnvwlevfr kakasskrks lkdpasgkpp lhsqhgafes keslqdpfsa
     1441 gkqyplnike ngksldieve avnqgmseee qaafaaeaaa raaakaaaea lasteancnk
     1501 llqlpkipsf hkfarreqya qmdegkwpgg vfgrqdcise idsrncrvrd wsvdfsaacv
     1561 nldnsgmsvd nlsqrshlkl rehsgeslav dssifmkawv dtagnggikd yhaierwqsq
     1621 aaaadpdffh ptnfkdeeds ntssrqptwk ndgranessv sqvsvnkerf enhphgadci
     1681 kqavvdyvas llmplykark idkegyksim kktatkvmeq atdaeknmav fefldfkrkn
     1741 kirpfvdkli erhmamkptm nydvvkd
//
LOCUS       XP_016694176            1767 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine-specific histone demethylase 1 homolog 3 [Gossypium
            hirsutum].
ACCESSION   XP_016694176
VERSION     XP_016694176.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838687.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016694176.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1767
                     /product="lysine-specific histone demethylase 1 homolog 3"
                     /calculated_mol_wt=192915
     Region          6..1759
                     /region_name="PLN02976"
                     /note="amine oxidase"
                     /db_xref="CDD:215527"
     CDS             1..1767
                     /gene="LOC107910719"
                     /coded_by="XM_016838687.2:380..5683"
                     /db_xref="GeneID:107910719"
ORIGIN      
        1 mdggggskkr lkvtavevgv dsdddepils llklrrpknp kkdkaglegs agkcqkvevk
       61 agktvdkdee dfggmndtla sfrkklkdpk kdidpgamrv rsnslnksve gggildgksv
      121 sntdvkgqdi gedrsdvatd kvvgkkrtgk vrrtksdska kpsevddesr akleedqneg
      181 glspgeglyq cshkaqsgsv gkscpifclk hnceaahhas dsknpsrncg dsshsvssss
      241 fshssskecn taenqgfdhs lyqqesilep gdltvqkdpt eypcrsskvc dkerychsni
      301 elrdnfsaid lrskpgtess qqnklnlsls vvdslkmeet ctdvpnscae eysletsihp
      361 nelvasiqrc nsalhqpsed aspgacgpih dtvfiskkan vdspistpde neschedavs
      421 lpsselknsk ssafqrggrn ikkrrhgdma yegdadwenl lteqgffgnq qfadsdhsfr
      481 arekfdeaai ssglkacavg pvekikfkev lkcrgglqey lecrnhilgl wskdvnrilp
      541 lvdcgvsdtp segepsrasl ireiyafldq ggyinfgiss kkekaelsvk dnykllegrk
      601 sdgnsvasva dsedgvafil gqvknskasm daktglrvvd enqaseatia iaevlvdsit
      661 pelpykcqqn gsfsaklntg lissqvsstd lscdatdvgv apvvtpeern dsqyvqsaty
      721 dkpdgnhqll ndsevrknii vigagpaglt aarhlkrqgf svvvleardr iggrvytdcs
      781 slsvpvdlga siitgveadv stnrrpdpss licaqlglel tvlnsscply divsgqkvpa
      841 dlddaleaey nsllddmvfl vaqkgkkamt msledgleya lkrhrmeeig adieeteshs
      901 svdafydska snifgfprkk cseeeilspl errvmnwhya hleygcaasl kevslpnwnq
      961 ddvyggfgga hcmikggyst vveslgegll ihlnhvvtni syspkgpgvd nshhrqvkvs
     1021 tsngsefsgd avlitvplgc lkagaikfsp plpqwkhssi qqlgfgvlnk vvlefpevfw
     1081 ddtvdyfgvt aeetdsrghc fmfwnvrktv gapvlialva gkaaidgqni sasdhvnhav
     1141 iilrklfgea svpdpvasvv tdwgrdpfsy gaysyvaiga sgedydmlar pvenclffag
     1201 eatckehpdt vggamlsglr eavrlidift tgndytaeve ameaaqrhse sgrdevrdii
     1261 krleavelsn vlyknsldra rilsreallr dmffnvktta grlhlakkll glpveslksf
     1321 agtkeglstl nswmldsmgk dgtqllrhcv rllvlvstdl lavrssgigk tvkekicvht
     1381 srdiraiasq lvnvwlevfr kakasskrks lkdpasgkpp lhsqhgafes keslqdpfsa
     1441 gkqyplnike ngksldieve avnqgmseee qaafaaeaaa raaakaaaea lasteancnk
     1501 llqlpkipsf hkfarreqya qmdegkwpgg vfgrqdcise idsrncrvrd wsvdfsaacv
     1561 nldnsgmsvd nlsqrshlkl rehsgeslav dssifmkawv dtagnggikd yhaierwqsq
     1621 aaaadpdffh ptnfkdeeds ntssrqptwk ndgranessv sqvsvnkerf enhphgadci
     1681 kqavvdyvas llmplykark idkegyksim kktatkvmeq atdaeknmav fefldfkrkn
     1741 kirpfvdkli erhmamkptm nydvvkd
//
LOCUS       XP_040944702             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944702
VERSION     XP_040944702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088768.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088768.1:252..1943"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_040944703             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944703
VERSION     XP_040944703.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088769.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088769.1:298..1989"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_040944704             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944704
VERSION     XP_040944704.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088770.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088770.1:255..1946"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_040944705             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944705
VERSION     XP_040944705.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088771.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088771.1:301..1992"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_040944706             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944706
VERSION     XP_040944706.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088772.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088772.1:226..1917"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_040944707             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944707
VERSION     XP_040944707.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088773.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088773.1:170..1861"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_040944708             563 aa            linear   PLN 06-AUG-2024
DEFINITION  bZIP transcription factor 29 [Gossypium hirsutum].
ACCESSION   XP_040944708
VERSION     XP_040944708.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088774.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="bZIP transcription factor 29"
                     /calculated_mol_wt=61781
     Region          401..452
                     /region_name="bZIP_plant_RF2"
                     /note="Basic leucine zipper (bZIP) domain of Plant
                     RF2-like transcription factors: a DNA-binding and
                     dimerization domain; cd14703"
                     /db_xref="CDD:269851"
     Region          401..452
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269851"
     Site            order(404..405,407..409,411..416,418..420)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269851"
     Site            order(419,422..423,426..427,429..430,433..434,436..437,
                     440..441,443..444,447..448,450..451)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269851"
     Region          425..483
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..563
                     /gene="LOC107910718"
                     /coded_by="XM_041088774.1:229..1920"
                     /db_xref="GeneID:107910718"
ORIGIN      
        1 mkmegsnsip kpqsnldipf snasqmasps pspsymrlsp ennnskrpgi ppshpnnpta
       61 slpysqqiig srpnaqhgap shsrslsqpt ffsldrlppw cpppyrdppv ssasdpasnd
      121 vsmeerfans nvrsslpspv aggcnefrig essslpprkg hrrsssdvpl gfstmiqslp
      181 qsipignpgv ldrsvsgret sfgvgkpiql vkresewrkd sgsnlevtse rksevdvadd
      241 lfnaymnlen letlnssgte drdmdskasg tktyggessd nevdsrvhkh pisiqgmssg
      301 isnekregvk rraagdiapt vrhyrsvsmd symgslqfde dtpkippsgn hgnhhspgsp
      361 gdansskfnf elgssefnes elkkimenek laemasvdpk rvkrilanrq saarskqrkm
      421 qyiaeleqkv qtlqteattl saqltmlqrd sagltsqnne lkfrlqameq qaqlkdalne
      481 alaaevqrlk ltaaefsgev hlsncmaqql sidhqmlqlq pqqqqqrniy qmqqqhqqpq
      541 qghhnqsqtq qqngdasaan vsk
//
LOCUS       XP_016694168             136 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H3.3 [Gossypium hirsutum].
ACCESSION   XP_016694168
VERSION     XP_016694168.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016838679.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="histone H3.3"
                     /calculated_mol_wt=15275
     Region          1..136
                     /region_name="PTZ00018"
                     /note="histone H3; Provisional"
                     /db_xref="CDD:185400"
     Site            order(40..48,50,64..67,70,73,84..87,117..119,121)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(45,48,51..52,55..56,58,60,62..63,67..68,70..72,
                     74..75,77,79,82..86,88..89,92..93,96..98,100..102,
                     104..106,109,118..122,126,129)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(49,52..53,56..57,59,95,99,102,109,113,118)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(107,110..111,114..115,117,123..124,127..128,
                     130..132)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..136
                     /gene="LOC107910716"
                     /coded_by="XM_016838679.2:177..587"
                     /db_xref="GeneID:107910716"
ORIGIN      
        1 martkqtark stggkaprkq latkaarksa pttggvkkph ryrpgtvalr eirkyqkste
       61 llirklpfqr lvreiaqdfk tdlrfqshav lalqeaaeay lvglfedtnl caihakrvti
      121 mpkdiqlarr irgera
//
LOCUS       XP_016693049            1494 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear pore complex protein NUP155 [Gossypium hirsutum].
ACCESSION   XP_016693049
VERSION     XP_016693049.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837560.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693049.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1494
                     /product="nuclear pore complex protein NUP155"
                     /calculated_mol_wt=163257
     Region          53..550
                     /region_name="Nucleoporin_N"
                     /note="Nup133 N terminal like; pfam08801"
                     /db_xref="CDD:400932"
     Region          86..1302
                     /region_name="NUP170"
                     /note="Nuclear pore complex subunit [Intracellular
                     trafficking and secretion]; COG5308"
                     /db_xref="CDD:227624"
     CDS             1..1494
                     /gene="LOC107909870"
                     /coded_by="XM_016837560.2:333..4817"
                     /db_xref="GeneID:107909870"
ORIGIN      
        1 mswveevvlr dvtnaglvvs dligrevaaq ldleealeas ryashpysth prewppliev
       61 edtwelppvl ierynaagge gtalcgifpe irrawasvdn slflwrfdkw dgqcpeynve
      121 eqaicavgla ksrpgifiea iqyllilatp velilvgvcc sgggdnsdpy aevslqplpe
      181 ytipsdgvtm tcisctdkgr ifmagrdghi yelhyttgsg whkrcrkvcl tagvgsvisr
      241 wvipnmfkfg avdpivemvv dnerqilyar teemkiqvfv mgpsgdsplk kvaeernlln
      301 qkdahyggrq atasrasnrs akpsivsisp lstleskwlh lvailsdgrr mylststssg
      361 snstvgglsg fnnhhhrpsc lkvvttrpsp plgvsggltf gamslagrnq tedlslkvet
      421 ayystgtlvl sdsspptmss llivsrdsss qsslsgnlga sarssralre svsslpvegr
      481 mlfvadvlpl pdtaatvlsl yselefcgse ssvescekas gklwargdls tqhilprrri
      541 vifstvgmme vvfnrpvdil rrllesnspr piledffnrf gageaaamcl mlaarivhse
      601 nlisnvvaek aaeafedpri vgvpqvegts glsntrtaag gfsmgqvvqe aepvfsgahe
      661 glclcssrll fpvwelpvmv vkggcdaase ngliacrlsv gamqvlenkt raleiflrsr
      721 rnkrrglygc vaglgdmtgs ilygtgselg agdrsmvrnl fgayfrsves ngggtsnkrq
      781 rlpyspaela amevrameci rqlllrsaea lfllqlvsqh hvtrlvqgfd anirqelvql
      841 tfhqlvcsee gdrlatrlis almeyytgpd grgtvddisg klregcpsyf kesdykffla
      901 vecleraavt pdpdvkenla reafdflskv pesadlrtvc krfedlrfye avvrlplqka
      961 qaldpagdaf heqieqaird yaiaqreqcy eiiasalrsl kgegsqrefg sparpvavrs
     1021 vldhasrrky icqivqlsvq spdrlfheyl yrtmidlgle nelleyggpd lvpflqtagc
     1081 epaqevrals altsatpsvg qpgapihsnq akyfdllary yvlkrqhlla ahvllrlaer
     1141 rsidgsnaps leqrrqylsn avlqaksasn ndglvasnrg afdsglldll egklavlqfq
     1201 ikvkeeleam atrleatpgt sesvqngsaa dsrfngdanl anaarekake lssdlksitq
     1261 lyneyavpfe lweiclemly fanysgdads siiretwarl idqallsggi aeacsvlkrv
     1321 gskvypgdga vlpldtlclh lekaalerve sgtesvgded varallaack gaaeptlnty
     1381 dqllsngail sspnlrlrll qsvlvvlrew amsvfaqrmg ttaagaslil ggafspeqtm
     1441 vlnqgirdki tsaanrymte vrrlplpqsr teavyrgfre leesliapfs fdrf
//
LOCUS       XP_040944709             348 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin protein ligase RIE1 [Gossypium hirsutum].
ACCESSION   XP_040944709
VERSION     XP_040944709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088775.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..348
                     /product="E3 ubiquitin protein ligase RIE1"
                     /calculated_mol_wt=38549
     Region          296..338
                     /region_name="RING-H2_PA-TM-RING"
                     /note="RING finger, H2 subclass, found in the PA-TM-RING
                     ubiquitin ligase family; cd16454"
                     /db_xref="CDD:438118"
     CDS             1..348
                     /gene="LOC121214711"
                     /coded_by="XM_041088775.1:341..1387"
                     /db_xref="GeneID:121214711"
ORIGIN      
        1 maasdphapl lrprqpdgsa arpvslahll gratgrrgas mlvretaare leerradwgy
       61 skpvvaldml wntafvvvsv vmlistadet pntpirlwic ayalqcllhv vlvwleyrrr
      121 nsrrisvtde ergeavsgdv ndsedeedsg lfgsnessit krcetvntma sflwwivgfy
      181 wvvsggdill qnaprlywla vvflafdvff aifcvvlacl igialccclp ciiailyait
      241 eqegaseadl silpkykfqi innreepslg agkmipiets sgylaneril lpedaeccic
      301 lssyedgval halpcnhhfh stcivkwlkm natcplckyn ilkgneqv
//
LOCUS       XP_040944710             669 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ORR21 [Gossypium hirsutum].
ACCESSION   XP_040944710
VERSION     XP_040944710.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088776.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..669
                     /product="two-component response regulator ORR21"
                     /calculated_mol_wt=72492
     Region          45..159
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     Region          229..282
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..669
                     /gene="LOC107909872"
                     /coded_by="XM_041088776.1:390..2399"
                     /db_xref="GeneID:107909872"
ORIGIN      
        1 matmhrvvqs svstsdattt sydgltscka adivisdqfp aglrvlvvdd ditclkilek
       61 mlhrcryhvt tcpqakvaln llrerkgcfd vilsdvympd mdgykllehv glemdlpvim
      121 msadgstrav mkgirhgacd ylikpireee lkniwqhvvr kkwnenkele hsgslddtdq
      181 hkqrhddaey assvndatet slkplkkrsn skeeddgeid nddpstskkp rvvwsvelhq
      241 qfvsavnqlg idkavpkril elmnvpgltr envashlqkf rlylkrisgv aqqggianpl
      301 cgpveanvki gslgsfniqa laasgqippq tlaavhaell grsagnlvva tdqpallqat
      361 pqgakciqvd qgvafvqhsv ksesssskhf sqsfapvedv asgfrswpsn nigtagpsns
      421 gglssqngnm lidllqqqqq lqkpqqrstv selrrsinvq pschvvpsqs sasfragnsp
      481 vsvtqngsys rtavidysll ssqsncpsln igqvsdvnlq ttgvlsgyip pasvspsvss
      541 csvnadncas qqvqtssmtf kasrhlpgfv hstsnipdpy gstksgdlln qepfnnlgyi
      601 nkgtclpakf avdefqshls ssshgkvfse nigtrvkqep smefgdnakv gipmlqqfrp
      661 ndlmsvfte
//
LOCUS       XP_016690996             152 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 31 [Gossypium hirsutum].
ACCESSION   XP_016690996
VERSION     XP_016690996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835507.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="MLP-like protein 31"
                     /calculated_mol_wt=17449
     Region          10..151
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(11,24..25,28,32,39,58,60..61,66,69,71,83,85,87,
                     91..92,99,101,103,105,114,116,118,120,132..133,135..136,
                     139..140,142..144)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(47..48,50..56)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..152
                     /gene="LOC107908282"
                     /coded_by="XM_016835507.2:55..513"
                     /db_xref="GeneID:107908282"
ORIGIN      
        1 maqirrmdck vevkssadrf fdafntkahl mpkmstrlis dvkllqgdwn slgsvrmwyy
       61 asqgksaack evrenvdekn rtivygileg eisnyyktwk stlnvtpnge gslakwtiey
      121 ekqndhvpep lnycdfyaiw skdvdaylln ak
//
LOCUS       XP_040944711             347 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944711
VERSION     XP_040944711.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088777.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X1"
                     /calculated_mol_wt=39388
     Region          <11..>268
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(111,113..114)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..347
                     /gene="LOC107909874"
                     /coded_by="XM_041088777.1:261..1304"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrkgarwylm emagvvtytg akiiqnarll vekigkplel dtdgiwcall
      121 gsfpenftfk tndlkkklti sypcvmlnvd varnntndqy qtlvnpvnkt ytthsecsie
      181 fevdgpykam iipaskeegi likkryvvfn vdgtlaelkg feikrrgelk likifqaelf
      241 dkflngstle ecysavavva nrwldlldqd lffsppdggl desnisleek lrrersrerg
      301 lgvtryewvk tiskkktimv plpggvcgti ssvnlnilli maylvha
//
LOCUS       XP_040944712             347 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944712
VERSION     XP_040944712.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088778.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X1"
                     /calculated_mol_wt=39388
     Region          <11..>268
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(111,113..114)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..347
                     /gene="LOC107909874"
                     /coded_by="XM_041088778.1:246..1289"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrkgarwylm emagvvtytg akiiqnarll vekigkplel dtdgiwcall
      121 gsfpenftfk tndlkkklti sypcvmlnvd varnntndqy qtlvnpvnkt ytthsecsie
      181 fevdgpykam iipaskeegi likkryvvfn vdgtlaelkg feikrrgelk likifqaelf
      241 dkflngstle ecysavavva nrwldlldqd lffsppdggl desnisleek lrrersrerg
      301 lgvtryewvk tiskkktimv plpggvcgti ssvnlnilli maylvha
//
LOCUS       XP_040944713             347 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944713
VERSION     XP_040944713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088779.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X1"
                     /calculated_mol_wt=39388
     Region          <11..>268
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(111,113..114)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..347
                     /gene="LOC107909874"
                     /coded_by="XM_041088779.1:166..1209"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrkgarwylm emagvvtytg akiiqnarll vekigkplel dtdgiwcall
      121 gsfpenftfk tndlkkklti sypcvmlnvd varnntndqy qtlvnpvnkt ytthsecsie
      181 fevdgpykam iipaskeegi likkryvvfn vdgtlaelkg feikrrgelk likifqaelf
      241 dkflngstle ecysavavva nrwldlldqd lffsppdggl desnisleek lrrersrerg
      301 lgvtryewvk tiskkktimv plpggvcgti ssvnlnilli maylvha
//
LOCUS       XP_040944715             326 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944715
VERSION     XP_040944715.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088781.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X2"
                     /calculated_mol_wt=37118
     Region          <11..>268
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(111,113..114)
                     /site_type="metal-binding"
                     /db_xref="CDD:99912"
     CDS             1..326
                     /gene="LOC107909874"
                     /coded_by="XM_041088781.1:357..1337"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrkgarwylm emagvvtytg akiiqnarll vekigkplel dtdgiwcall
      121 gsfpenftfk tndlkkklti sypcvmlnvd varnntndqy qtlvnpvnkt ytthsecsie
      181 fevdgpykam iipaskeegi likkryvvfn vdgtlaelkg feikrrgelk likifqaelf
      241 dkflngstle ecysavavva nrwldlldqd lffsppdggl desnisleek lrrersrerg
      301 lgvtryewvk tiskkktimv plpggg
//
LOCUS       XP_040944716             308 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944716
VERSION     XP_040944716.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088782.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X3"
                     /calculated_mol_wt=34801
     Region          <2..>229
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(72,74..75)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..308
                     /gene="LOC107909874"
                     /coded_by="XM_041088782.1:628..1554"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 mkiqeaqdmv vlydslqlah kcilnsfygy vmrkgarwyl memagvvtyt gakiiqnarl
       61 lvekigkple ldtdgiwcal lgsfpenftf ktndlkkklt isypcvmlnv dvarnntndq
      121 yqtlvnpvnk tytthsecsi efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk
      181 gfeikrrgel klikifqael fdkflngstl eecysavavv anrwldlldq dlffsppdgg
      241 ldesnislee klrrersrer glgvtryewv ktiskkktim vplpggvcgt issvnlnill
      301 imaylvha
//
LOCUS       XP_040944717             308 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944717
VERSION     XP_040944717.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088783.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X3"
                     /calculated_mol_wt=34801
     Region          <2..>229
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(72,74..75)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..308
                     /gene="LOC107909874"
                     /coded_by="XM_041088783.1:462..1388"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 mkiqeaqdmv vlydslqlah kcilnsfygy vmrkgarwyl memagvvtyt gakiiqnarl
       61 lvekigkple ldtdgiwcal lgsfpenftf ktndlkkklt isypcvmlnv dvarnntndq
      121 yqtlvnpvnk tytthsecsi efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk
      181 gfeikrrgel klikifqael fdkflngstl eecysavavv anrwldlldq dlffsppdgg
      241 ldesnislee klrrersrer glgvtryewv ktiskkktim vplpggvcgt issvnlnill
      301 imaylvha
//
LOCUS       XP_040944718             308 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944718
VERSION     XP_040944718.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088784.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X3"
                     /calculated_mol_wt=34801
     Region          <2..>229
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(72,74..75)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..308
                     /gene="LOC107909874"
                     /coded_by="XM_041088784.1:447..1373"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 mkiqeaqdmv vlydslqlah kcilnsfygy vmrkgarwyl memagvvtyt gakiiqnarl
       61 lvekigkple ldtdgiwcal lgsfpenftf ktndlkkklt isypcvmlnv dvarnntndq
      121 yqtlvnpvnk tytthsecsi efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk
      181 gfeikrrgel klikifqael fdkflngstl eecysavavv anrwldlldq dlffsppdgg
      241 ldesnislee klrrersrer glgvtryewv ktiskkktim vplpggvcgt issvnlnill
      301 imaylvha
//
LOCUS       XP_040944719             308 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944719
VERSION     XP_040944719.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088785.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X3"
                     /calculated_mol_wt=34801
     Region          <2..>229
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(72,74..75)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..308
                     /gene="LOC107909874"
                     /coded_by="XM_041088785.1:365..1291"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 mkiqeaqdmv vlydslqlah kcilnsfygy vmrkgarwyl memagvvtyt gakiiqnarl
       61 lvekigkple ldtdgiwcal lgsfpenftf ktndlkkklt isypcvmlnv dvarnntndq
      121 yqtlvnpvnk tytthsecsi efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk
      181 gfeikrrgel klikifqael fdkflngstl eecysavavv anrwldlldq dlffsppdgg
      241 ldesnislee klrrersrer glgvtryewv ktiskkktim vplpggvcgt issvnlnill
      301 imaylvha
//
LOCUS       XP_040944720             308 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944720
VERSION     XP_040944720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088786.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X3"
                     /calculated_mol_wt=34801
     Region          <2..>229
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(72,74..75)
                     /site_type="metal-binding"
                     /db_xref="CDD:99918"
     CDS             1..308
                     /gene="LOC107909874"
                     /coded_by="XM_041088786.1:433..1359"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 mkiqeaqdmv vlydslqlah kcilnsfygy vmrkgarwyl memagvvtyt gakiiqnarl
       61 lvekigkple ldtdgiwcal lgsfpenftf ktndlkkklt isypcvmlnv dvarnntndq
      121 yqtlvnpvnk tytthsecsi efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk
      181 gfeikrrgel klikifqael fdkflngstl eecysavavv anrwldlldq dlffsppdgg
      241 ldesnislee klrrersrer glgvtryewv ktiskkktim vplpggvcgt issvnlnill
      301 imaylvha
//
LOCUS       XP_040944721             288 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X4 [Gossypium
            hirsutum].
ACCESSION   XP_040944721
VERSION     XP_040944721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088787.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..288
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X4"
                     /calculated_mol_wt=32799
     Region          <11..>209
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     CDS             1..288
                     /gene="LOC107909874"
                     /coded_by="XM_041088787.1:166..1032"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrndlkkklt isypcvmlnv dvarnntndq yqtlvnpvnk tytthsecsi
      121 efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk gfeikrrgel klikifqael
      181 fdkflngstl eecysavavv anrwldlldq dlffsppdgg ldesnislee klrrersrer
      241 glgvtryewv ktiskkktim vplpggvcgt issvnlnill imaylvha
//
LOCUS       XP_016693061             285 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X5 [Gossypium
            hirsutum].
ACCESSION   XP_016693061
VERSION     XP_016693061.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837572.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X5"
                     /calculated_mol_wt=32606
     Region          <11..>268
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(111,113..114)
                     /site_type="metal-binding"
                     /db_xref="CDD:99912"
     CDS             1..285
                     /gene="LOC107909874"
                     /coded_by="XM_016837572.2:357..1214"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrkgarwylm emagvvtytg akiiqnarll vekigkplel dtdgiwcall
      121 gsfpenftfk tndlkkklti sypcvmlnvd varnntndqy qtlvnpvnkt ytthsecsie
      181 fevdgpykam iipaskeegi likkryvvfn vdgtlaelkg feikrrgelk likifqaelf
      241 dkflngstle ecysavavva nrwldlldiy sslprmvdlt rviyh
//
LOCUS       XP_016693063             267 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon catalytic subunit A isoform X6 [Gossypium
            hirsutum].
ACCESSION   XP_016693063
VERSION     XP_016693063.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837574.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..267
                     /product="DNA polymerase epsilon catalytic subunit A
                     isoform X6"
                     /calculated_mol_wt=30529
     Region          <11..>209
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     CDS             1..267
                     /gene="LOC107909874"
                     /coded_by="XM_016837574.2:355..1158"
                     /db_xref="GeneID:107909874"
ORIGIN      
        1 madhqfrlfc sfrdrryeyk glnkvwkgkl seakaggnpm kiqeaqdmvv lydslqlahk
       61 cilnsfygyv mrndlkkklt isypcvmlnv dvarnntndq yqtlvnpvnk tytthsecsi
      121 efevdgpyka miipaskeeg ilikkryvvf nvdgtlaelk gfeikrrgel klikifqael
      181 fdkflngstl eecysavavv anrwldlldq dlffsppdgg ldesnislee klrrersrer
      241 glgvtryewv ktiskkktim vplpggg
//
LOCUS       XP_016693065              91 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g17140 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693065
VERSION     XP_016693065.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837576.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..91
                     /product="pentatricopeptide repeat-containing protein
                     At2g17140 isoform X1"
                     /calculated_mol_wt=10325
     Region          8..57
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          10..39
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          45..74
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          46..76
                     /region_name="PPR"
                     /note="PPR repeat; pfam01535"
                     /db_xref="CDD:366695"
     CDS             1..91
                     /gene="LOC107909876"
                     /coded_by="XM_016837576.2:293..568"
                     /db_xref="GeneID:107909876"
ORIGIN      
        1 mpekgclpne fsfgilvrgy crfglankgl elldemrssg ifpnrvvynt lissfykegk
       61 tgdveklver mkedgltckq qplmfyqlyl c
//
LOCUS       XP_016693066              78 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g17140 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693066
VERSION     XP_016693066.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837577.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..78
                     /product="pentatricopeptide repeat-containing protein
                     At2g17140 isoform X2"
                     /calculated_mol_wt=8531
     Region          8..57
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          10..39
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..78
                     /gene="LOC107909876"
                     /coded_by="XM_016837577.2:371..607"
                     /db_xref="GeneID:107909876"
ORIGIN      
        1 mpekgclpne fsfgilvrgy crfglankgl elldemrssg ifpnrvvynt lissfykead
       61 mqaaasnvlp tlslliwg
//
LOCUS       XP_016690997             171 aa            linear   PLN 06-AUG-2024
DEFINITION  probable calcium-binding protein CML25 [Gossypium hirsutum].
ACCESSION   XP_016690997
VERSION     XP_016690997.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835508.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="probable calcium-binding protein CML25"
                     /calculated_mol_wt=18714
     Region          28..167
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..171
                     /gene="LOC107908283"
                     /coded_by="XM_016835508.2:282..797"
                     /db_xref="GeneID:107908283"
ORIGIN      
        1 mgfgsilsre kkqnpsnpva ssspmrtqle elelvfkkfd ingdgkisss elgsvlgslg
       61 lqpsedellk iikeidtdgd gfidfkefve lntkgvdsnk vlenlkdafl vydidgngfi
      121 taeelhqvfk slgdecsime crkmisgvdk dgngmidfee fkvmmmagar s
//
LOCUS       XP_016693067             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693067
VERSION     XP_016693067.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837578.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11762
     CDS             1..105
                     /gene="LOC107909878"
                     /coded_by="XM_016837578.2:103..420"
                     /db_xref="GeneID:107909878"
ORIGIN      
        1 mqglwcegla ifqsglslal evenmeqkki ssssssnnna virdedeykg vpihsqvmki
       61 kqefekikhp slqqpdmrrv lreitrqrsr splglaerpi svgns
//
LOCUS       XP_040944722             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944722
VERSION     XP_040944722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088788.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..305
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35084
     Region          70..204
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..305
                     /gene="LOC107907907"
                     /coded_by="XM_041088788.1:101..1018"
                     /db_xref="GeneID:107907907"
ORIGIN      
        1 masenfvqsa iprfdghydh wnmlmenflr skehwqvvld diletargtv vsdaqraeik
       61 alklkdlkak nflfqaidrs iletilckdt fkqiwdfmkk kyqgiakakl aqlqalhaef
      121 ktlhmnages vtdyfaktma iankmrihge rlenvtiiek ilrsmttkfn sivcsikesn
      181 didklsidel qgslliheqk lnrqdkeeqv lqvlsnnhsf fskgggrgrv rgrgnntsng
      241 ghshrkyedn qfsysqgrgr ghdnnnstlf mskfvdkskv eyyrchrfgh yksecrtnln
      301 rdggk
//
LOCUS       XP_016693068             182 aa            linear   PLN 06-AUG-2024
DEFINITION  nudix hydrolase 18, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016693068
VERSION     XP_016693068.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..182
                     /product="nudix hydrolase 18, mitochondrial"
                     /calculated_mol_wt=21134
     Region          22..151
                     /region_name="NUDIX_DIPP2_like_Nudt4"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; cd04666"
                     /db_xref="CDD:467551"
     CDS             1..182
                     /gene="LOC107909879"
                     /coded_by="XM_016837579.2:687..1235"
                     /db_xref="GeneID:107909879"
ORIGIN      
        1 mvcmvsrtgr hlqrydnlgr rqvvgcipyr yksssdgtmt ddlevlviss qkcqkmmfpk
       61 ggweldesre eaalreslee agvlgnvece lgkwdfisks hgtfyegymf pllvkeeldf
      121 wpeqnlrqrt wmnvkeardv cqhwwmkeal dilverlnsl kqqneqnypn icsdlvakis
      181 sl
//
LOCUS       XP_016693071             107 aa            linear   PLN 06-AUG-2024
DEFINITION  methyl-CpG-binding domain protein 4-like protein [Gossypium
            hirsutum].
ACCESSION   XP_016693071
VERSION     XP_016693071.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837582.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..107
                     /product="methyl-CpG-binding domain protein 4-like
                     protein"
                     /calculated_mol_wt=12210
     CDS             1..107
                     /gene="LOC107909880"
                     /coded_by="XM_016837582.2:111..434"
                     /db_xref="GeneID:107909880"
ORIGIN      
        1 mssfaptsrn grklqevegd ekapdsastk aiknfglqrk raemiqrmsq eylwkewthv
       61 telhgvgkya adayaifctr kgdrvtptdh mlnhywnfly gpkntsi
//
LOCUS       XP_016693072             692 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine-rich receptor-like protein kinase 25 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693072
VERSION     XP_016693072.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837583.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="cysteine-rich receptor-like protein kinase 25
                     isoform X1"
                     /calculated_mol_wt=77551
     Region          <64..127
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          146..243
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          347..638
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(347..351,355,367,369,398,414..417,421,423,492,494,
                     496..497,499,510,513,531..534)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(347..351,355,367,369,398,414..417,421,492,494,
                     496..497,499,510)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(351,421,423,492,494,496,513,531..534)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(509..516,527..534)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..692
                     /gene="LOC107909882"
                     /coded_by="XM_016837583.2:113..2191"
                     /db_xref="GeneID:107909882"
ORIGIN      
        1 mpsfnlissv llffyifdla aeanpsflyk fcydkdttft tnstygtnln lllssltsna
       61 hridgfyntt vgqqppdriy glflcrgdvt pdvcrdcvaa aarnatslcp veknsviwyd
      121 kcmlrysnes ifstmetrpg gtvwdndtft eeedfvdiva slvkdvasea adapmgakkf
      181 atkeanlsgs qklyslaqct pdisdvacnl clesaitefs dccrqkekat rassllpscn
      241 vqygltpfyn ktagevsrsk psplppgdsg kgksssqtii yiivptvgfl vllstfcyci
      301 lrrkarmkpy llkdqkdksk artmnslqyd mstieaatdn fsdanmigvg gfgsvykgtl
      361 angqqiavkr lsrsskqgae efknevalva klqhrnlvrl lgfcvereer mliyefvpnk
      421 sldcflfglp lfnlklspkd tymlwiklll mdidtekqkq ldwptrlkiv kgtargllyl
      481 htdsrlkivh rdlkpsnill dedmnpkisd fgmariveen hnleytkkiv gtygyiapey
      541 avhgifsfks dvysygvltl eivggktnss fynpesaesl lsyawrywte rrpleimdpt
      601 lrdsyvsdev irciqigllc vqqnpksrpt marivpmlss sditlpppqh pafffgtktr
      661 gstsgeemgl drstrkfqcs tndvsitefy pr
//
LOCUS       XP_016693073             666 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016693073
VERSION     XP_016693073.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837584.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..666
                     /product="putative receptor-like protein kinase At4g00960
                     isoform X2"
                     /calculated_mol_wt=74492
     Region          <64..127
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          146..243
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          347..612
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(347..351,355,367,369,398,414..417,421,423,466,468,
                     470..471,473,484,487,505..508)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(347..351,355,367,369,398,414..417,421,466,468,
                     470..471,473,484)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(351,421,423,466,468,470,487,505..508)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(483..490,501..508)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..666
                     /gene="LOC107909882"
                     /coded_by="XM_016837584.2:149..2149"
                     /db_xref="GeneID:107909882"
ORIGIN      
        1 mpsfnlissv llffyifdla aeanpsflyk fcydkdttft tnstygtnln lllssltsna
       61 hridgfyntt vgqqppdriy glflcrgdvt pdvcrdcvaa aarnatslcp veknsviwyd
      121 kcmlrysnes ifstmetrpg gtvwdndtft eeedfvdiva slvkdvasea adapmgakkf
      181 atkeanlsgs qklyslaqct pdisdvacnl clesaitefs dccrqkekat rassllpscn
      241 vqygltpfyn ktagevsrsk psplppgdsg kgksssqtii yiivptvgfl vllstfcyci
      301 lrrkarmkpy llkdqkdksk artmnslqyd mstieaatdn fsdanmigvg gfgsvykgtl
      361 angqqiavkr lsrsskqgae efknevalva klqhrnlvrl lgfcvereer mliyefvpnk
      421 sldcflfdte kqkqldwptr lkivkgtarg llylhtdsrl kivhrdlkps nilldedmnp
      481 kisdfgmari veenhnleyt kkivgtygyi apeyavhgif sfksdvysyg vltleivggk
      541 tnssfynpes aesllsyawr ywterrplei mdptlrdsyv sdevirciqi gllcvqqnpk
      601 srptmarivp mlsssditlp ppqhpafffg tktrgstsge emgldrstrk fqcstndvsi
      661 tefypr
//
LOCUS       XP_016693117             616 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 [Gossypium
            hirsutum].
ACCESSION   XP_016693117
VERSION     XP_016693117.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837628.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="putative receptor-like protein kinase At4g00960"
                     /calculated_mol_wt=68443
     Region          <35..75
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cl03296"
                     /db_xref="CDD:470777"
     Region          93..188
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          296..560
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(296..300,304,316,318,347,363..366,370,372,415,417,
                     419..420,422,433,436,454..457)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(296..300,304,316,318,347,363..366,370,415,417,
                     419..420,422,433)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(300,370,372,415,417,419,436,454..457)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(432..439,450..457)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..616
                     /gene="LOC107909920"
                     /coded_by="XM_016837628.2:280..2130"
                     /db_xref="GeneID:107909920"
ORIGIN      
        1 mwiklkalss ilshlllgia lvdanlrcyd teettpngcy tclnasiqdl iascpnrkea
       61 lswggdppcl aryanrpffg ilelqptdsg yntaditsnl tqfdtiwesl mdrvvskass
      121 gsstkyatge adftafqtih almqctpdls hkdcdsclrq svsyyesccr gkqggyvqkp
      181 ncwfrwdlcp fytrnastaa slspppspas ppplsvnstr kkgdggshss htiaiiivpi
      241 vilvavliil avavllkrik ktkrddqnnk thgealqfdf navrvatdnf sdanllgrgg
      301 fgsvykgqle dgrkvavkrl sessgqgeqe fknevmllak lqhrnlvrll glsfeqkeri
      361 liyeflpnss ldnfifdpvk clilnwekry kiiegiakgl lylhedsqyr iihrdlkpan
      421 illdeemnpk isdfgmaklf tvdqtradts kvvgtygyma peyawhgqys vksdvysfgv
      481 lvleiisgkk issfsnqevg dsllthawrn wregtplevv dpilrdgsrs eimrcihlgl
      541 lcvqdnidsr ptmasvvlml ssysislpvp srpafsmhst metetksqss slsnqskren
      601 iqvsvneasi seldpr
//
LOCUS       XP_040944723             624 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944723
VERSION     XP_040944723.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088789.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..624
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72513
     Region          28..117
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(42,44,46,71..73,112)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            42..44
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            42
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(71..74,78..81)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..624
                     /gene="LOC107909885"
                     /coded_by="XM_041088789.1:625..2499"
                     /db_xref="GeneID:107909885"
ORIGIN      
        1 mdddfhdrgq sslakpkseq qrehlfhtrc hvqgklcrvi idgescsnia sttmveklcl
       61 tttkhpqpyq lqglsnegqf rvtqqvriaf sigkyqdevv cdvmpiqach lllgepwqld
      121 rkvthdgrtn rysfkhqgkk ltlvpltpeq vhedqiklrn svktseekek knekeqkeie
      181 sekecetekk fekeveerre neleketkek deerlvrnvs tnqdmnfscv atfkvpersk
      241 dnfqlqylsn errfhtinlg kdeitlhdpe gkrgkeilet essadlkiid ktfgdlvlkr
      301 sphfdpincy ssivvdkvit krsvicysln lpcvkssnls ksvlenkvtk fskfvfnlys
      361 clkqfmwlym kfefyltkvn stteirlhya pderrfvlne kgkidpyssa yrgkmletfe
      421 tllyssdsdk drvdehldrn vldcpilfid dlsvlmvdkk ilvfdnacvs esidrrlmhg
      481 mimqlcepce sfqiptcddy vyhliyysqf ihglweqcet teclktcpsl fqifdeavvs
      541 kldclhgnln lsihirytcs vmlmiglqac frcyllshgy sfqwtqlplv pfdrgksssf
      601 dfsdsrmnlf eeggndtshk spns
//
LOCUS       XP_040944724             624 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944724
VERSION     XP_040944724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088790.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..624
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72513
     Region          28..117
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(42,44,46,71..73,112)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            42..44
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            42
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(71..74,78..81)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..624
                     /gene="LOC107909885"
                     /coded_by="XM_041088790.1:460..2334"
                     /db_xref="GeneID:107909885"
ORIGIN      
        1 mdddfhdrgq sslakpkseq qrehlfhtrc hvqgklcrvi idgescsnia sttmveklcl
       61 tttkhpqpyq lqglsnegqf rvtqqvriaf sigkyqdevv cdvmpiqach lllgepwqld
      121 rkvthdgrtn rysfkhqgkk ltlvpltpeq vhedqiklrn svktseekek knekeqkeie
      181 sekecetekk fekeveerre neleketkek deerlvrnvs tnqdmnfscv atfkvpersk
      241 dnfqlqylsn errfhtinlg kdeitlhdpe gkrgkeilet essadlkiid ktfgdlvlkr
      301 sphfdpincy ssivvdkvit krsvicysln lpcvkssnls ksvlenkvtk fskfvfnlys
      361 clkqfmwlym kfefyltkvn stteirlhya pderrfvlne kgkidpyssa yrgkmletfe
      421 tllyssdsdk drvdehldrn vldcpilfid dlsvlmvdkk ilvfdnacvs esidrrlmhg
      481 mimqlcepce sfqiptcddy vyhliyysqf ihglweqcet teclktcpsl fqifdeavvs
      541 kldclhgnln lsihirytcs vmlmiglqac frcyllshgy sfqwtqlplv pfdrgksssf
      601 dfsdsrmnlf eeggndtshk spns
//
LOCUS       XP_040944725             624 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944725
VERSION     XP_040944725.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088791.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..624
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72513
     Region          28..117
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(42,44,46,71..73,112)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            42..44
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            42
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(71..74,78..81)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..624
                     /gene="LOC107909885"
                     /coded_by="XM_041088791.1:343..2217"
                     /db_xref="GeneID:107909885"
ORIGIN      
        1 mdddfhdrgq sslakpkseq qrehlfhtrc hvqgklcrvi idgescsnia sttmveklcl
       61 tttkhpqpyq lqglsnegqf rvtqqvriaf sigkyqdevv cdvmpiqach lllgepwqld
      121 rkvthdgrtn rysfkhqgkk ltlvpltpeq vhedqiklrn svktseekek knekeqkeie
      181 sekecetekk fekeveerre neleketkek deerlvrnvs tnqdmnfscv atfkvpersk
      241 dnfqlqylsn errfhtinlg kdeitlhdpe gkrgkeilet essadlkiid ktfgdlvlkr
      301 sphfdpincy ssivvdkvit krsvicysln lpcvkssnls ksvlenkvtk fskfvfnlys
      361 clkqfmwlym kfefyltkvn stteirlhya pderrfvlne kgkidpyssa yrgkmletfe
      421 tllyssdsdk drvdehldrn vldcpilfid dlsvlmvdkk ilvfdnacvs esidrrlmhg
      481 mimqlcepce sfqiptcddy vyhliyysqf ihglweqcet teclktcpsl fqifdeavvs
      541 kldclhgnln lsihirytcs vmlmiglqac frcyllshgy sfqwtqlplv pfdrgksssf
      601 dfsdsrmnlf eeggndtshk spns
//
LOCUS       XP_040944726             624 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944726
VERSION     XP_040944726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088792.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..624
                     /product="uncharacterized protein"
                     /calculated_mol_wt=72513
     Region          28..117
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(42,44,46,71..73,112)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            42..44
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            42
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(71..74,78..81)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..624
                     /gene="LOC107909885"
                     /coded_by="XM_041088792.1:508..2382"
                     /db_xref="GeneID:107909885"
ORIGIN      
        1 mdddfhdrgq sslakpkseq qrehlfhtrc hvqgklcrvi idgescsnia sttmveklcl
       61 tttkhpqpyq lqglsnegqf rvtqqvriaf sigkyqdevv cdvmpiqach lllgepwqld
      121 rkvthdgrtn rysfkhqgkk ltlvpltpeq vhedqiklrn svktseekek knekeqkeie
      181 sekecetekk fekeveerre neleketkek deerlvrnvs tnqdmnfscv atfkvpersk
      241 dnfqlqylsn errfhtinlg kdeitlhdpe gkrgkeilet essadlkiid ktfgdlvlkr
      301 sphfdpincy ssivvdkvit krsvicysln lpcvkssnls ksvlenkvtk fskfvfnlys
      361 clkqfmwlym kfefyltkvn stteirlhya pderrfvlne kgkidpyssa yrgkmletfe
      421 tllyssdsdk drvdehldrn vldcpilfid dlsvlmvdkk ilvfdnacvs esidrrlmhg
      481 mimqlcepce sfqiptcddy vyhliyysqf ihglweqcet teclktcpsl fqifdeavvs
      541 kldclhgnln lsihirytcs vmlmiglqac frcyllshgy sfqwtqlplv pfdrgksssf
      601 dfsdsrmnlf eeggndtshk spns
//
LOCUS       XP_016693118             692 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine-rich receptor-like protein kinase 25 [Gossypium hirsutum].
ACCESSION   XP_016693118
VERSION     XP_016693118.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837629.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693118.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="cysteine-rich receptor-like protein kinase 25"
                     /calculated_mol_wt=77662
     Region          <64..127
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          146..243
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          347..638
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(347..351,355,367,369,398,414..417,421,423,492,494,
                     496..497,499,510,513,531..534)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(347..351,355,367,369,398,414..417,421,492,494,
                     496..497,499,510)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(351,421,423,492,494,496,513,531..534)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(509..516,527..534)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..692
                     /gene="LOC107909921"
                     /coded_by="XM_016837629.2:121..2199"
                     /db_xref="GeneID:107909921"
ORIGIN      
        1 mpsfnlissv llffyifdla aeanpsflyk icydkdttft tnstygtnln lllssltsna
       61 hridgfyntt vgqqppdriy glflcrgdvt pdvcrdcvaa aarnatslcp veknsviwyd
      121 kcmlrysnes ifstmetrpg gtvwdndtft eeedfvdiva slvkdvasea adapmgakkf
      181 atkeanlsgs qklyslaqct pdisdvacnl clesaitefs dccrqkekat rassllpscn
      241 vqygltpfyn ktagevsrsk psplpprdsg kgksssqtii yiivptvgfl vllstfcyci
      301 lrrkarmkpy llkdqkdksk artmnslqyd mstieaatdn fsdanmigvg gfgsvykgtl
      361 angqqiavkr lsrsskqgae efknevalva klqhrnlvrl lgfcvereer mliyefvpnk
      421 sldcflfglp lfnlklspkd tymlwiklll mdidtekqkq ldwptrlkiv kgtargllyl
      481 htdsrlkivh rdlkpsnill dedmnpkisd fgmariveen hnleytkkiv gtygyiapey
      541 avhgifsfks dvysygvltl eivggktnss fynpesaesl lsyawrywte rrpleimdpt
      601 lrdsyvsdev irciqigllc vqqnpksrpt marivpmlss sditlpppqh ltfffgtktr
      661 gstsgeemgl drstrkfqcs tndvsitefy pr
//
LOCUS       XP_016693121             665 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693121
VERSION     XP_016693121.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837632.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..665
                     /product="putative receptor-like protein kinase At4g00960
                     isoform X1"
                     /calculated_mol_wt=73581
     Region          31..124
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          142..237
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          345..609
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(345..349,353,365,367,396,412..415,419,421,464,466,
                     468..469,471,482,485,503..506)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(345..349,353,365,367,396,412..415,419,464,466,
                     468..469,471,482)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(349,419,421,464,466,468,485,503..506)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(481..488,499..506)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..665
                     /gene="LOC107909924"
                     /coded_by="XM_016837632.2:293..2290"
                     /db_xref="GeneID:107909924"
ORIGIN      
        1 mwiklkalss ilshlligia lvdanlrcyd tgnftlnsty gknrdlilas llpnvsangg
       61 fftasigqds nkiyalgmcr gdstpngcyt clnasiqdli ascpnrkeal swggdppcla
      121 ryanrpffgi lelqptdagy ntaditsnlt qfdtiweslm drvvskassg sstkyatgea
      181 dftafqtiha lmqctpdlsh kdcdsclrqs vsyyesccrg kqggyvqkpn cwfrwdlypf
      241 ytrnastaas lspppspasp pplsvnstrk kgdggshssh tiaiiivpiv ilvavliila
      301 vavllkrikk tkrddqnnkt hgealqfdfn avrvatdnfs danllgrggf gsvykgqled
      361 grkvavkrls essgqgeqef knevmllakl qhrnlvrllg lsfeqkeril iyeflpnssl
      421 dnfifdpvkc lilnwekryk iiegiakgll ylhedsqyri ihrdlkpani lldeemnpki
      481 sdfgmaklft vdqtradtsk vvgtygymap eyawhgqysv ksdvysfgvl vleiisgkki
      541 ssfsnqevgd sllthawrnw regtplevvd pilrdgsrse imrcihlgll cvqdnidsrp
      601 tmasvvlmls sysislpvps rpafsmhstm etetksqsss lsnqskreni qvsvneasis
      661 eldpr
//
LOCUS       XP_040944727             636 aa            linear   PLN 06-AUG-2024
DEFINITION  putative cysteine-rich receptor-like protein kinase 35 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944727
VERSION     XP_040944727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088793.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..636
                     /product="putative cysteine-rich receptor-like protein
                     kinase 35 isoform X2"
                     /calculated_mol_wt=70143
     Region          31..124
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          142..237
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          345..580
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(345..348,351,353,365,367,396,412..415,435,439..440,
                     442,452..453)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..636
                     /gene="LOC107909924"
                     /coded_by="XM_041088793.1:296..2206"
                     /db_xref="GeneID:107909924"
ORIGIN      
        1 mwiklkalss ilshlligia lvdanlrcyd tgnftlnsty gknrdlilas llpnvsangg
       61 fftasigqds nkiyalgmcr gdstpngcyt clnasiqdli ascpnrkeal swggdppcla
      121 ryanrpffgi lelqptdagy ntaditsnlt qfdtiweslm drvvskassg sstkyatgea
      181 dftafqtiha lmqctpdlsh kdcdsclrqs vsyyesccrg kqggyvqkpn cwfrwdlypf
      241 ytrnastaas lspppspasp pplsvnstrk kgdggshssh tiaiiivpiv ilvavliila
      301 vavllkrikk tkrddqnnkt hgealqfdfn avrvatdnfs danllgrggf gsvykgqled
      361 grkvavkrls essgqgeqef knevmllakl qhrnlvrllg lsfeqkeril iyeflpnssl
      421 dnfifdsqyr iihrdlkpan illdeemnpk isdfgmaklf tvdqtradts kvvgtygyma
      481 peyawhgqys vksdvysfgv lvleiisgkk issfsnqevg dsllthawrn wregtplevv
      541 dpilrdgsrs eimrcihlgl lcvqdnidsr ptmasvvlml ssysislpvp srpafsmhst
      601 metetksqss slsnqskren iqvsvneasi seldpr
//
LOCUS       XP_016683339             665 aa            linear   PLN 06-AUG-2024
DEFINITION  putative receptor-like protein kinase At4g00960 [Gossypium
            hirsutum].
ACCESSION   XP_016683339
VERSION     XP_016683339.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016827850.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..665
                     /product="putative receptor-like protein kinase At4g00960"
                     /calculated_mol_wt=73548
     Region          31..124
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          142..237
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     Region          345..609
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(345..349,353,365,367,396,412..415,419,421,464,466,
                     468..469,471,482,485,503..506)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(345..349,353,365,367,396,412..415,419,464,466,
                     468..469,471,482)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(349,419,421,464,466,468,485,503..506)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(481..488,499..506)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..665
                     /gene="LOC107901742"
                     /coded_by="XM_016827850.2:294..2291"
                     /db_xref="GeneID:107901742"
ORIGIN      
        1 mwiklkalss ilshlligia lvdanlrcyd tgnftlnsty gknrdlilas llpnvsangg
       61 fftasigqds nkiyalgmcr gdstpngcyt clnasiqdli ascpnrkeal swggdppcla
      121 ryanrpffgi lelqptdagy ntaditsnlt qfdtiweslm drvvskassg sstkyatgea
      181 dftafqtiha lmqctpdlsh kdcdsclrqs vsnyesccrg kqggyvqkpn cwfrwdlypf
      241 ykrnastaas lspppspasp pplsvnstsk kgdggshssh tiaiiivpiv ilvavliila
      301 vavllkrikk tkrddqnnki rgealqfdfn avrvatdnfs danllgrggf gsvykgqled
      361 grkvavkrls essgqgeqef knevmllakl qhrnlvrllg lsfeqkeril iyeflpnssl
      421 dnfifdpvkr sllnwekryk iiegiakgll ylhedsqyri ihrdlkpani lldeemnpki
      481 sdfgmaklft vdqtradtsk vvgtygymap eyawhgqysv ksdvysfgvl vleiisgkki
      541 ssfsnqevgd sllthawrnw regtplevvd pilrdgsrse imrcihlgll cvqdnidsrp
      601 tmasvvlmls sysislpvps rpafsmhstm etetksqsss lsnqskreni qvsvneasis
      661 eldpr
//
LOCUS       XP_040944729             357 aa            linear   PLN 06-AUG-2024
DEFINITION  1-aminocyclopropane-1-carboxylate oxidase homolog 4 [Gossypium
            hirsutum].
ACCESSION   XP_040944729
VERSION     XP_040944729.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088795.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="1-aminocyclopropane-1-carboxylate oxidase
                     homolog 4"
                     /calculated_mol_wt=39698
     Region          27..349
                     /region_name="PLN02393"
                     /note="leucoanthocyanidin dioxygenase like protein"
                     /db_xref="CDD:215220"
     CDS             1..357
                     /gene="LOC107909927"
                     /coded_by="XM_041088795.1:174..1247"
                     /db_xref="GeneID:107909927"
ORIGIN      
        1 mattvdsgnq ydraeevkrf ddskigvkgl vdsglttipr ifvhppetls dlkpkpksva
       61 iptidlsgtr stvveqvaaa srsfgffqiv nhgipvqvld rmiasirafh elptdvkarf
      121 yrrdagtgvs fisnvdlfhs kaaswrdtlq irlgptlpel ehipevcrde vvqwnlhstt
      181 lgeqlmglls eglgldkdti knttcldarv mvghyypccp qpdltvgias htdpgvltll
      241 lqdhtgglqi khegewvdvk pvhgalvini adilqimsnd eyksvehrvl anpseearvs
      301 iavffnpsar ealygpfael tspekpahyr qfiyndymrr fftkeldgkt ltnfykl
//
LOCUS       XP_040944730             188 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 [Gossypium hirsutum].
ACCESSION   XP_040944730
VERSION     XP_040944730.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088796.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..188
                     /product="protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1"
                     /calculated_mol_wt=21878
     Region          79..153
                     /region_name="PLATZ"
                     /note="PLATZ transcription factor; pfam04640"
                     /db_xref="CDD:461376"
     CDS             1..188
                     /gene="LOC121214712"
                     /coded_by="XM_041088796.1:55..621"
                     /db_xref="GeneID:121214712"
ORIGIN      
        1 mrnslalhrl hapktqqrsk fgvvppwviv mynsvffnnc vhhpnekkke vdkfcidclq
       61 sfcshclpsh afhkhikirr yiysdvinrq dlcelfncsg iqtyltkkak vlflkqrtqs
      121 hqqqsssrdy kcsicgktlq dntslycsia ckvlniyrde eifvglpltk kprlrqtrkg
      181 vplrspmf
//
LOCUS       XP_016693126             155 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693126
VERSION     XP_016693126.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837637.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18178
     CDS             1..155
                     /gene="LOC107909928"
                     /coded_by="XM_016837637.2:483..950"
                     /db_xref="GeneID:107909928"
ORIGIN      
        1 mandfldkve dnaivriwse kvqlekgdsl akdyvselwd ytrisvkqns lqelseiwdr
       61 wddetkqlfy snygdlphll nikvderlfr alaqywnpay sfftfgnidf vptieeytal
      121 vhcprllvdk ayskaahvlt fwkklmsvig qfwpg
//
LOCUS       XP_016693127             159 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1A [Gossypium hirsutum].
ACCESSION   XP_016693127
VERSION     XP_016693127.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837638.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="ubiquitin-conjugating enzyme E2 variant 1A"
                     /calculated_mol_wt=17915
     Region          8..141
                     /region_name="UEV_UBE2V"
                     /note="ubiquitin E2 variant (UEV) domain of
                     ubiquitin-conjugating enzyme E2 variant 1, 2 and related
                     proteins; cd23807"
                     /db_xref="CDD:467427"
     CDS             1..159
                     /gene="LOC107909929"
                     /coded_by="XM_016837638.2:263..742"
                     /db_xref="GeneID:107909929"
ORIGIN      
        1 mgsegsrvvv prnfrlleel ergekgigdg tvsygmddad diymqswtgt iigppntvhe
       61 griyqlklfc gldypdnpps vrfqtrinmt cvnqetgvve pslfpmlanw qreytmedil
      121 tqlkkemmsp qnrrmaqppe gneearldqk glvvkcciv
//
LOCUS       XP_040944731             159 aa            linear   PLN 06-AUG-2024
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1A [Gossypium hirsutum].
ACCESSION   XP_040944731
VERSION     XP_040944731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088797.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="ubiquitin-conjugating enzyme E2 variant 1A"
                     /calculated_mol_wt=17915
     Region          8..141
                     /region_name="UEV_UBE2V"
                     /note="ubiquitin E2 variant (UEV) domain of
                     ubiquitin-conjugating enzyme E2 variant 1, 2 and related
                     proteins; cd23807"
                     /db_xref="CDD:467427"
     CDS             1..159
                     /gene="LOC107909929"
                     /coded_by="XM_041088797.1:135..614"
                     /db_xref="GeneID:107909929"
ORIGIN      
        1 mgsegsrvvv prnfrlleel ergekgigdg tvsygmddad diymqswtgt iigppntvhe
       61 griyqlklfc gldypdnpps vrfqtrinmt cvnqetgvve pslfpmlanw qreytmedil
      121 tqlkkemmsp qnrrmaqppe gneearldqk glvvkcciv
//
LOCUS       XP_016693047             291 aa            linear   PLN 06-AUG-2024
DEFINITION  plasmodesmata-located protein 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693047
VERSION     XP_016693047.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837558.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693047.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..291
                     /product="plasmodesmata-located protein 6 isoform X1"
                     /calculated_mol_wt=30793
     Region          41..133
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          144..237
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     CDS             1..291
                     /gene="LOC107909869"
                     /coded_by="XM_016837558.2:289..1164"
                     /db_xref="GeneID:107909869"
ORIGIN      
        1 malptkrasf fpfllllllv tisiflvtps nsatdtfvfg gcsqlkfisg spyeynvnsi
       61 ltslvnsamf tsynnftisa sqdtvyglfq crgdlengdc grcvakavsq lgtlcldstg
      121 gglqlegcfv kydnatflgv edksvvvkrc gplistdsda larrdtvldf lgasdgtykp
      181 frvaesgdlr gvaqcvgdls ptecqdclse aigrlktdcg askwgdmyla kcyarysqgg
      241 dhshggddtd ndddeiaktl ailigliagi aliivfvsal skacekdskg g
//
LOCUS       XP_016693048             289 aa            linear   PLN 06-AUG-2024
DEFINITION  plasmodesmata-located protein 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693048
VERSION     XP_016693048.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837559.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693048.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="plasmodesmata-located protein 6 isoform X2"
                     /calculated_mol_wt=30577
     Region          41..133
                     /region_name="Stress-antifung"
                     /note="Salt stress response/antifungal; pfam01657"
                     /db_xref="CDD:460284"
     Region          144..237
                     /region_name="Gnk2-like"
                     /note="antifungal protein ginkbilobin-2-like domains found
                     in plants; cd23509"
                     /db_xref="CDD:467874"
     CDS             1..289
                     /gene="LOC107909869"
                     /coded_by="XM_016837559.2:237..1106"
                     /db_xref="GeneID:107909869"
ORIGIN      
        1 malptkrasf fpfllllllv tisiflvtps nsatdtfvfg gcsqlkfisg spyeynvnsi
       61 ltslvnsamf tsynnftisa sqdtvyglfq crgdlengdc grcvakavsq lgtlcldstg
      121 gglqlegcfv kydnatflgv edksvvvkrc gplistdsda larrdtvldf lgasdgtykp
      181 frvaesgdlr gvaqcvgdls ptecqdclse aigrlktdcg askwgdmyla kcyarysqgg
      241 dhshggddnd ddeiaktlai ligliagial iivfvsalsk acekdskgg
//
LOCUS       XP_016693046             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693046
VERSION     XP_016693046.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837557.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693046.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..130
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14591
     CDS             1..130
                     /gene="LOC107909868"
                     /coded_by="XM_016837557.2:244..636"
                     /db_xref="GeneID:107909868"
ORIGIN      
        1 malewvvlgy aagaeaimvl lltlpgldgl rkgliavtrg llkpflsvvp fclfllmdiy
       61 wkyetrpsce gdsctpsehl rhqksimksq rnalliaaal lfywllysvt glvvkveqln
      121 qrlerlknrd
//
LOCUS       XP_016693045             477 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693045
VERSION     XP_016693045.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837556.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693045.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..477
                     /product="plant UBX domain-containing protein 2 isoform
                     X1"
                     /calculated_mol_wt=52367
     Region          <77..>185
                     /region_name="RNF220"
                     /note="E3 ubiquitin-protein ligase RNF220; pfam15926"
                     /db_xref="CDD:464946"
     Region          178..272
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(194,197..198,201,210..211,213..215,218,220,224)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          371..451
                     /region_name="UBX_UBXN6"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 6 (UBXN6) and similar proteins; cd16119"
                     /db_xref="CDD:340536"
     CDS             1..477
                     /gene="LOC107909867"
                     /coded_by="XM_016837556.2:240..1673"
                     /db_xref="GeneID:107909867"
ORIGIN      
        1 msemkdklkg fmkkvntqfs ssssssssgk fkgqgrvlgs ssssgpvnpi ltrpspipnp
       61 apsssssnsk pvlpskppvs dqnkpssnsn pepnhkmgsg fdpydsfits skvskngftl
      121 nvfecpicga syrseeevsi hvetcvnntn sldrkgtdde sgsnetalee srgevevrvs
      181 sflsgkpaeg sievvlkllr nivkepgnek frklrmsnpk ireaigevag gvellefvgf
      241 elkeeggemw avmdvpkeeq isviskaiml lepgnmekfk ksenisptas pekeetvesk
      301 kidrkirvff svpesvaaki elpdsfynls seelkreaem rkkkiadsql lipksykekq
      361 akaarrkyrr tiiciqfpdg vvlqgefapw eptsalyefv ssalkepcle felldpvivk
      421 lrvipsfpaa gekgrtleee dlvpsalirf kpvetdsvvf tglsnellei seplvtn
//
LOCUS       XP_040944732             420 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944732
VERSION     XP_040944732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088798.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..420
                     /product="plant UBX domain-containing protein 2 isoform
                     X2"
                     /calculated_mol_wt=46565
     Region          <77..>185
                     /region_name="RNF220"
                     /note="E3 ubiquitin-protein ligase RNF220; pfam15926"
                     /db_xref="CDD:464946"
     Region          178..272
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(194,197..198,201,210..211,213..215,218,220,224)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          371..>398
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..420
                     /gene="LOC107909867"
                     /coded_by="XM_041088798.1:240..1502"
                     /db_xref="GeneID:107909867"
ORIGIN      
        1 msemkdklkg fmkkvntqfs ssssssssgk fkgqgrvlgs ssssgpvnpi ltrpspipnp
       61 apsssssnsk pvlpskppvs dqnkpssnsn pepnhkmgsg fdpydsfits skvskngftl
      121 nvfecpicga syrseeevsi hvetcvnntn sldrkgtdde sgsnetalee srgevevrvs
      181 sflsgkpaeg sievvlkllr nivkepgnek frklrmsnpk ireaigevag gvellefvgf
      241 elkeeggemw avmdvpkeeq isviskaiml lepgnmekfk ksenisptas pekeetvesk
      301 kidrkirvff svpesvaaki elpdsfynls seelkreaem rkkkiadsql lipksykekq
      361 akaarrkyrr tiiciqfpdg vvlqgefapw eptsalyeem klrkkkkyyt wehennnkvd
//
LOCUS       XP_040944733             415 aa            linear   PLN 06-AUG-2024
DEFINITION  plant UBX domain-containing protein 2 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944733
VERSION     XP_040944733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088799.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..415
                     /product="plant UBX domain-containing protein 2 isoform
                     X3"
                     /calculated_mol_wt=45692
     Region          <77..>185
                     /region_name="RNF220"
                     /note="E3 ubiquitin-protein ligase RNF220; pfam15926"
                     /db_xref="CDD:464946"
     Region          178..272
                     /region_name="PUB"
                     /note="PNGase/UBA or UBX (PUB) domain of p97 adaptor
                     proteins; cd09212"
                     /db_xref="CDD:198416"
     Site            order(194,197..198,201,210..211,213..215,218,220,224)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198416"
     Region          371..>398
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..415
                     /gene="LOC107909867"
                     /coded_by="XM_041088799.1:240..1487"
                     /db_xref="GeneID:107909867"
ORIGIN      
        1 msemkdklkg fmkkvntqfs ssssssssgk fkgqgrvlgs ssssgpvnpi ltrpspipnp
       61 apsssssnsk pvlpskppvs dqnkpssnsn pepnhkmgsg fdpydsfits skvskngftl
      121 nvfecpicga syrseeevsi hvetcvnntn sldrkgtdde sgsnetalee srgevevrvs
      181 sflsgkpaeg sievvlkllr nivkepgnek frklrmsnpk ireaigevag gvellefvgf
      241 elkeeggemw avmdvpkeeq isviskaiml lepgnmekfk ksenisptas pekeetvesk
      301 kidrkirvff svpesvaaki elpdsfynls seelkreaem rkkkiadsql lipksykekq
      361 akaarrkyrr tiiciqfpdg vvlqgefapw eptsalyegg skmdfhkcwl hpipr
//
LOCUS       XP_040944734            1606 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 23 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944734
VERSION     XP_040944734.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088800.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1606
                     /product="mediator of RNA polymerase II transcription
                     subunit 23 isoform X1"
                     /calculated_mol_wt=180269
     Region          <675..1321
                     /region_name="Med23"
                     /note="Mediator complex subunit 23; pfam11573"
                     /db_xref="CDD:463299"
     CDS             1..1606
                     /gene="LOC107909886"
                     /coded_by="XM_041088800.1:105..4925"
                     /db_xref="GeneID:107909886"
ORIGIN      
        1 mdqtqrsvaa aansrtyqfh paraaitdlf nlylgvrnsr qkaddsvrep pnkthktqkr
       61 vlalnrelpp rneqflldfe qlqtqfgdqd qlqsvtesvl islviqccsh apraefllfa
      121 lrslcsigyv nwdtflpsll ssvasaegpv sqgsqgvpsv sssvsqsgmm pstsvianas
      181 nfqsanaast ltsvhvigsp aqstiepssg atlspvklsd iacngqpstt rmdssirdna
      241 isnlrqlcck miltglecnl kpvtqaeifh hmlnwlvnwd qrqhgneecd gkswrlekal
      301 iewlhccldv iwllveedkc rvpfyellrs glqfienipd dealftlile ihrrrdmmam
      361 hmqmldqhlh cptfgthril sqttpnvsve gvanlryspi typsvlgepl hgedlaasiq
      421 rgsldweral rcirhairst pspdwwkrvl vvapfyrgsv ptpgavftcd miceatidri
      481 vellkltnse incwqewlvf sdiffflmks gcidfvdfid klgsrlsasd hhilntnhvt
      541 wllaqiirve hvmtalntds rkvettrkil sfhredrssd pnnpqsilld fisscqnlri
      601 wslntstrdy lnneqlqkgk qidewwrqvs kgermmdyms mddksigmfw vvsytmaqpa
      661 cetvmnwlss ggvtellpga nvqpnerfmv mrevsplpis llsgfsmnly lklvfqmees
      721 lfagqvvpsi amvetytrll liaphslfrs hfshlaqrna sllskpavtl lvleivnyrl
      781 lplyryqgkc kplmydvtki isalkgkrgd hrvfrlaenl cinlilslrd ffsvkregkg
      841 pteftetlnr itiitlaiti ktrgiadadh llylqtmleq ilatsqhrws ektlcyfpsi
      901 lrdllmtrtd krglaiqewq qsettvinqc tqllssstep nyvmtylnrs fpqhrqylca
      961 gawilmqghp eninsgnlar vlrefspeev tsniytmvdv llhhihielq hghslqdlll
     1021 ktcanlaffv wthelipldi lllalidrdd dphalrivis lldrqelqqr vklycmnrgp
     1081 pehwlytgif krsdlqnalg nhlswkeryp tffddivarl lpviplvvyr liendaiesa
     1141 drmlgmyslf layhplrftf vrdilayfyg hlpgkltvri lnvldlskip fsesfpqhis
     1201 ssnpaicppp eyfatlllal vnnvipplns nsrtgsmgda snnsvrgphn ktpatpqsgp
     1261 anasegqkaf yqiqdpgtyt qlvletavie ilslpisasq ivsslvqivv niqptliqss
     1321 nglhgassga vqgsvlptsp sggstdsagr stpsvsgint ssfvsrsgyt cqqlsclfiq
     1381 acglllaqlp pefhlqlyme asriikesww ltdgkrslse ldsavsyall dptwasqdnt
     1441 staignival lhsffsnlpq ewlegthvii qqlrpvtsva mlriafrimg pllprlvtah
     1501 nlfnkilsll lntlvdvfgk ntqppvpvea seitdlidyl hhiihyegqa gpvqanskpr
     1561 pevlsicgra aeslwpdvqh llshlkpdvn ssiyaathpk iaqnps
//
LOCUS       XP_040944735            1605 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 23 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944735
VERSION     XP_040944735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088801.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1605
                     /product="mediator of RNA polymerase II transcription
                     subunit 23 isoform X2"
                     /calculated_mol_wt=180170
     Region          <674..1320
                     /region_name="Med23"
                     /note="Mediator complex subunit 23; pfam11573"
                     /db_xref="CDD:463299"
     CDS             1..1605
                     /gene="LOC107909886"
                     /coded_by="XM_041088801.1:121..4938"
                     /db_xref="GeneID:107909886"
ORIGIN      
        1 mdqtqrsvaa aansrtyqfh paraaitdlf nlylgrnsrq kaddsvrepp nkthktqkrv
       61 lalnrelppr neqflldfeq lqtqfgdqdq lqsvtesvli slviqccsha praefllfal
      121 rslcsigyvn wdtflpslls svasaegpvs qgsqgvpsvs ssvsqsgmmp stsvianasn
      181 fqsanaastl tsvhvigspa qstiepssga tlspvklsdi acngqpsttr mdssirdnai
      241 snlrqlcckm iltglecnlk pvtqaeifhh mlnwlvnwdq rqhgneecdg kswrlekali
      301 ewlhccldvi wllveedkcr vpfyellrsg lqfienipdd ealftlilei hrrrdmmamh
      361 mqmldqhlhc ptfgthrils qttpnvsveg vanlryspit ypsvlgeplh gedlaasiqr
      421 gsldweralr cirhairstp spdwwkrvlv vapfyrgsvp tpgavftcdm iceatidriv
      481 ellkltnsei ncwqewlvfs diffflmksg cidfvdfidk lgsrlsasdh hilntnhvtw
      541 llaqiirveh vmtalntdsr kvettrkils fhredrssdp nnpqsilldf isscqnlriw
      601 slntstrdyl nneqlqkgkq idewwrqvsk germmdymsm ddksigmfwv vsytmaqpac
      661 etvmnwlssg gvtellpgan vqpnerfmvm revsplpisl lsgfsmnlyl klvfqmeesl
      721 fagqvvpsia mvetytrlll iaphslfrsh fshlaqrnas llskpavtll vleivnyrll
      781 plyryqgkck plmydvtkii salkgkrgdh rvfrlaenlc inlilslrdf fsvkregkgp
      841 teftetlnri tiitlaitik trgiadadhl lylqtmleqi latsqhrwse ktlcyfpsil
      901 rdllmtrtdk rglaiqewqq settvinqct qllssstepn yvmtylnrsf pqhrqylcag
      961 awilmqghpe ninsgnlarv lrefspeevt sniytmvdvl lhhihielqh ghslqdlllk
     1021 tcanlaffvw thelipldil llalidrddd phalrivisl ldrqelqqrv klycmnrgpp
     1081 ehwlytgifk rsdlqnalgn hlswkerypt ffddivarll pviplvvyrl iendaiesad
     1141 rmlgmyslfl ayhplrftfv rdilayfygh lpgkltvril nvldlskipf sesfpqhiss
     1201 snpaicpppe yfatlllalv nnvipplnsn srtgsmgdas nnsvrgphnk tpatpqsgpa
     1261 nasegqkafy qiqdpgtytq lvletaviei lslpisasqi vsslvqivvn iqptliqssn
     1321 glhgassgav qgsvlptsps ggstdsagrs tpsvsgints sfvsrsgytc qqlsclfiqa
     1381 cglllaqlpp efhlqlymea sriikeswwl tdgkrslsel dsavsyalld ptwasqdnts
     1441 taignivall hsffsnlpqe wlegthviiq qlrpvtsvam lriafrimgp llprlvtahn
     1501 lfnkilslll ntlvdvfgkn tqppvpveas eitdlidylh hiihyegqag pvqanskprp
     1561 evlsicgraa eslwpdvqhl lshlkpdvns siyaathpki aqnps
//
LOCUS       XP_016693077             499 aa            linear   PLN 06-AUG-2024
DEFINITION  glucan endo-1,3-beta-glucosidase 3 [Gossypium hirsutum].
ACCESSION   XP_016693077
VERSION     XP_016693077.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837588.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..499
                     /product="glucan endo-1,3-beta-glucosidase 3"
                     /calculated_mol_wt=53292
     Region          25..344
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          361..446
                     /region_name="X8"
                     /note="Possibly involved in carbohydrate binding;
                     smart00768"
                     /db_xref="CDD:197867"
     CDS             1..499
                     /gene="LOC107909887"
                     /coded_by="XM_016837588.2:170..1669"
                     /db_xref="GeneID:107909887"
ORIGIN      
        1 maifllllll lllvsavsgd edayigvnig tdlsdmptpt evvallkaqr irhvrlydad
       61 qamllalakt giqvtvsvpn dqllgigqsn ataanwvarn ivahvpatni saiavgsevl
      121 talpnaapil vsalkfihsa lvasnlddqi kvstphsssi ildsfppsqa ffnrswdpvm
      181 vpllkflqst gsylmlnvyp yydymqsngk ipldyalfrp lppnkeavda ntllhytnvf
      241 davvdaayfa msylnltnip ivvtesgwps kgdssepdai vdnantynsn likhvlnntg
      301 tprhpgiavs tyiyelyned lrpgsdsekn wglfdangip vytlhltgad tvfandttnk
      361 tfciakrgad pkmlqaaldw acgpgkvdcs plllghpcye pdnvashsty afnayyqrma
      421 kspgtcdfkg vatittsdps hgscifpgss gkngtlingt slapssndts sarppqsygt
      481 gsfttsvmig vlltgavfl
//
LOCUS       XP_016690703             195 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLANT CADMIUM RESISTANCE 2 [Gossypium hirsutum].
ACCESSION   XP_016690703
VERSION     XP_016690703.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835214.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="protein PLANT CADMIUM RESISTANCE 2"
                     /calculated_mol_wt=21279
     Region          59..157
                     /region_name="PLAC8"
                     /note="PLAC8 family; pfam04749"
                     /db_xref="CDD:461417"
     CDS             1..195
                     /gene="LOC107907912"
                     /coded_by="XM_016835214.2:297..884"
                     /db_xref="GeneID:107907912"
ORIGIN      
        1 masfnpsgye kysgsaaeat kfgqdaattg ipvsssnayy sdnsqttntr pqtktrvpws
       61 sglcgcfsdw rnccitcwcp cvtfgqiaei vdkgssscgv ngalytliac vtgcaccysc
      121 fyrakmrqqy mlkkhpcgdc lvhcfceyca lcqeyrelks rgydlsigwh gnmekqsrev
      181 amtsipptve ggmsr
//
LOCUS       XP_016693078             260 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin-like protein HCF164, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016693078
VERSION     XP_016693078.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837589.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..260
                     /product="thioredoxin-like protein HCF164, chloroplastic"
                     /calculated_mol_wt=28616
     Region          118..259
                     /region_name="TxlA"
                     /note="TRX-like protein A (TxlA) family; TxlA was
                     originally isolated from the cyanobacterium Synechococcus.
                     It is found only in oxygenic photosynthetic organisms. TRX
                     is a small enzyme that participate in redox reactions, via
                     the reversible oxidation of an...; cd02950"
                     /db_xref="CDD:239248"
     Site            order(149,152)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239248"
     CDS             1..260
                     /gene="LOC107909888"
                     /coded_by="XM_016837589.2:235..1017"
                     /db_xref="GeneID:107909888"
ORIGIN      
        1 marvasnpls lprfrpyfqv sdtallfksp slspyrtrkf qsiacqtnpl ptqtqpsdeg
       61 kvlaepdsvd dstseattss vgggfsespn kninrriaig stlaavglfm ssrldfgvsl
      121 kdlsaaavpy eealsngkpt vvefyadwce vcrelapdiy kveqqyrdrv nfvmlnvdnt
      181 kweqeldefg vegiphfafl dkdgneegnv vgrlprkylq envdalarge asvpharvvg
      241 qyssaesrkv hqvvdprshv
//
LOCUS       XP_016690705             209 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016690705
VERSION     XP_016690705.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835216.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690705.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="NAD(P)H-quinone oxidoreductase subunit L,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=23944
     Region          86..161
                     /region_name="NdhL"
                     /note="NADH dehydrogenase transmembrane subunit;
                     pfam10716"
                     /db_xref="CDD:402381"
     CDS             1..209
                     /gene="LOC107907913"
                     /coded_by="XM_016835216.2:134..763"
                     /db_xref="GeneID:107907913"
ORIGIN      
        1 mcsclslqip kalpsiyvsp sqcstkfpff nlsqhkptny pklykkpnvt ninlkpnnyl
       61 dakktslavp iaallstfel palavtgvnn epdlitviiq lgiiafgyfl ivppiimnwl
      121 rirwyrrnll emylqfmcvf lffpglllwa pflnfrkfpr dkslkypwdt pkdpsqvkna
      181 ylkypfakpe dydweckngg qgllvvkge
//
LOCUS       XP_040944736             177 aa            linear   PLN 06-AUG-2024
DEFINITION  NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944736
VERSION     XP_040944736.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088802.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..177
                     /product="NAD(P)H-quinone oxidoreductase subunit L,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=20539
     Region          54..129
                     /region_name="NdhL"
                     /note="NADH dehydrogenase transmembrane subunit;
                     pfam10716"
                     /db_xref="CDD:402381"
     CDS             1..177
                     /gene="LOC107907913"
                     /coded_by="XM_041088802.1:126..659"
                     /db_xref="GeneID:107907913"
ORIGIN      
        1 mcsclslqip kalpsiyvsp sqcstkfpff nlsqhkptny pklykfelpa lavtgvnnep
       61 dlitviiqlg iiafgyfliv ppiimnwlri rwyrrnllem ylqfmcvflf fpglllwapf
      121 lnfrkfprdk slkypwdtpk dpsqvknayl kypfakpedy dwecknggqg llvvkge
//
LOCUS       XP_016693079             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693079
VERSION     XP_016693079.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837590.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18659
     CDS             1..166
                     /gene="LOC107909889"
                     /coded_by="XM_016837590.2:31..531"
                     /db_xref="GeneID:107909889"
ORIGIN      
        1 mnpfllwsqn lftffdlvir tkrkkekkml lykqkknqgp kgnkllisii avgsagpirf
       61 vvneeapvad vidtalklyv regrlpvlgs nlnhfllycp sarsdplrpw diigsqgarn
      121 fvlckkpsse kmdnigrsrs gvmtrkgvgn wkawihksln ikissh
//
LOCUS       XP_016693080             565 aa            linear   PLN 06-AUG-2024
DEFINITION  putative clathrin assembly protein At2g01600 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693080
VERSION     XP_016693080.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837591.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693080.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..565
                     /product="putative clathrin assembly protein At2g01600
                     isoform X1"
                     /calculated_mol_wt=62147
     Region          31..307
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     Site            order(38,48,50..51)
                     /site_type="other"
                     /note="PtdIns(4,5)P2-binding site [chemical binding]"
                     /db_xref="CDD:340767"
     CDS             1..565
                     /gene="LOC107909891"
                     /coded_by="XM_016837591.2:308..2005"
                     /db_xref="GeneID:107909891"
ORIGIN      
        1 matlqtwrka yaalkdttkv glahvnsdya dldvavvkat nhvecppker hlrkifiats
       61 airpradvay cihalgrrlt kthnwtvalk tlivihralr egdptfreel lnfsqraril
      121 qlsnfkddss piawdcsawv rtyalfleer lecfrilkyd ieaerlprpd qgqdkgysrt
      181 reldseellt qlpalqqllh rligcrpega aignyviqya lalvlkesfk iycaindgii
      241 nlvdkffemp rheavnaldv ykqagqqans lsdfyevckg lelarnfqfp vlreppqsfl
      301 atmeeyirea prvvsvptep llqltyrpee gpsedtklpn depepsapad dnaastveta
      361 pppppptqtn mdtgdllgln ysapdasaie esnalalaiv ptesgtastf nssagqpvef
      421 dptgwelalv ttpstdisap tdrqlaggld sltlnslyde aayraqhpay gtpapnpfea
      481 qdpfamsnnv apppavqmaa maqqqnnpfg ayqpayqqpq qqqqqlmmsp snpfgdtgfg
      541 afpvnqvapv gqphannpfg stgll
//
LOCUS       XP_040944737             491 aa            linear   PLN 06-AUG-2024
DEFINITION  putative clathrin assembly protein At2g01600 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944737
VERSION     XP_040944737.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088803.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="putative clathrin assembly protein At2g01600
                     isoform X2"
                     /calculated_mol_wt=53783
     Region          13..233
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     CDS             1..491
                     /gene="LOC107909891"
                     /coded_by="XM_041088803.1:35..1510"
                     /db_xref="GeneID:107909891"
ORIGIN      
        1 mssvlqkkgi levalktliv ihralregdp tfreellnfs qrarilqlsn fkddsspiaw
       61 dcsawvrtya lfleerlecf rilkydieae rlprpdqgqd kgysrtreld seelltqlpa
      121 lqqllhrlig crpegaaign yviqyalalv lkesfkiyca indgiinlvd kffemprhea
      181 vnaldvykqa gqqanslsdf yevckglela rnfqfpvlre ppqsflatme eyireaprvv
      241 svptepllql tyrpeegpse dtklpndepe psapaddnaa stvetapppp pptqtnmdtg
      301 dllglnysap dasaieesna lalaivptes gtastfnssa gqpvefdptg welalvttps
      361 tdisaptdrq laggldsltl nslydeaayr aqhpaygtpa pnpfeaqdpf amsnnvappp
      421 avqmaamaqq qnnpfgayqp ayqqpqqqqq qlmmspsnpf gdtgfgafpv nqvapvgqph
      481 annpfgstgl l
//
LOCUS       XP_016693081             963 aa            linear   PLN 06-AUG-2024
DEFINITION  myosin-binding protein 2 [Gossypium hirsutum].
ACCESSION   XP_016693081
VERSION     XP_016693081.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837592.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693081.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..963
                     /product="myosin-binding protein 2"
                     /calculated_mol_wt=108820
     Region          596..674
                     /region_name="Zein-binding"
                     /note="pfam04576"
                     /db_xref="CDD:428019"
     CDS             1..963
                     /gene="LOC107909892"
                     /coded_by="XM_016837592.2:384..3275"
                     /db_xref="GeneID:107909892"
ORIGIN      
        1 maankfatml hnntnrvtlv layallewvl illlllnslf syliikfady fglqrpclwc
       61 trldhifdls kynnsyrdlv cdghaneisr lgycsshrkl aesrdmcedc lsssrsdccd
      121 lskklaffpw mkqvgliqdg gdkvmensee nckcsccgvm lekkwnfpyl likpswevld
      181 ypqkgnlite dggfdnvede gnasdgaksd vladfqedkq rveennrvei lshgdededg
      241 gegvgeelgk eeefscfiss fdcnqmaane ddfilekdlv smeeekegnl nvlmdgpelt
      301 qvacskdesp eiqpkhlefy iegdgchlip ielmasvgve sqriynfree degiagngdv
      361 ildfdmhcgt plelvvensc ssgekvvlis phesedetsv avvelmeske lkesfsthar
      421 eedeqvplne adevqgnaat geremsvdvn qvsdeqndei eaevsigtdi pdhepiediq
      481 lqhlfdefth enpstttqlh vdvdngskna eeetiqfktm tvetcdqaik ihlsvpsesn
      541 eieddkvldt ptsldgihql hkkllllekr esgtedsldg svfsdiecgd gvltveklks
      601 alkaerkaln dlyteleeer sasavaahqt maminrlqee kaamqmealq yqrmmeeqse
      661 ydqealqlln elmvkrekek aelekeleiy rrrvqdyetr ekmimlrrrk destrsatsg
      721 tcsnaedsds psvdlnqepk eedsfgnhqe dsrqntpada vlyleeslas feeerlsile
      781 qlkvleekmv slndeelhfe dvksiellye engngfhgis dftyetngvt nghfeganrk
      841 hhlekklmaa nakrllplfd aadaeiedgl lnghgngfds vvlqqnspan seleskklai
      901 eeevdhvyer lqaleadref lkhcisslrk gdkgiyllqe ilqhlrdlrs vdlrvrsigd
      961 tvi
//
LOCUS       XP_016693082             528 aa            linear   PLN 06-AUG-2024
DEFINITION  pectinesterase [Gossypium hirsutum].
ACCESSION   XP_016693082
VERSION     XP_016693082.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837593.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..528
                     /product="pectinesterase"
                     /calculated_mol_wt=57541
     Region          30..173
                     /region_name="PMEI-like_3"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; cd15798"
                     /db_xref="CDD:275442"
     Site            order(102..103,106,110,124,136,172)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:275442"
     Region          221..514
                     /region_name="Pectinesterase"
                     /note="pfam01095"
                     /db_xref="CDD:395871"
     CDS             1..528
                     /gene="LOC107909893"
                     /coded_by="XM_016837593.2:96..1682"
                     /db_xref="GeneID:107909893"
ORIGIN      
        1 mdklvviltf flthffifpl gnfvngatit sctqtpypdv cnfymgnslh vaanldqtqf
       61 sfrdvaiqvt lsqavqahql vssmdsssfd qraklawndc velyedtihh lnlskttnnq
      121 idsqtwlsaa ianqqtcqng fidfnlashl qalpsmlgni tklisnslai nkattvtsst
      181 shsnfakqva nrrllsdgfp awlsvadrkl lqttgappka divvaqdgsg nfktiteava
      241 aagggkrtvi yvkagvyken vdikrsakni mlvgdgidat ivtgsknaqi tttfrsatvg
      301 vsgdgfiard mtfentagpq khqavalrsg sdfsvfyrcs fkgyqdtlyv ysqrqfyrdc
      361 diygtvdfif gdavavfqsc niyirrpmsg qkntvtaqgr tdqnentgiv ihnsrvtass
      421 dmkavqgsfk sylgrpwqky srtvfmkstl dglidregwl pwsgnfalst lyyaeymntg
      481 sgadtsgrvk wggyhvigat eaakftvgnf lagnswipgt gvpfdvgl
//
LOCUS       XP_016693083             209 aa            linear   PLN 06-AUG-2024
DEFINITION  21 kDa protein [Gossypium hirsutum].
ACCESSION   XP_016693083
VERSION     XP_016693083.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837594.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..209
                     /product="21 kDa protein"
                     /calculated_mol_wt=22789
     Region          46..204
                     /region_name="PMEI-like_3"
                     /note="Uncharacterized subfamily of plant invertase/pectin
                     methylesterase inhibitor domains; cd15798"
                     /db_xref="CDD:275442"
     Site            order(118..119,122,126,153,165,201)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:275442"
     CDS             1..209
                     /gene="LOC107909897"
                     /coded_by="XM_016837594.2:145..774"
                     /db_xref="GeneID:107909897"
ORIGIN      
        1 mkplfsvpfl tflffhfysv ptlssyvydt satttnvins tdfirtscya tlypdicyts
       61 lygyanaiqq dparlaraai svslskarnm avyvsnlsre adygadpras aalhdcfsnm
      121 gdavdeirgs lkqmqrvvap gsesfrfqmg nvqtwmsaal tdeetctdgf edvaggpmkt
      181 evckraakvk kftsnalalv nsyaekgtv
//
LOCUS       XP_016693088             172 aa            linear   PLN 06-AUG-2024
DEFINITION  protein C2-DOMAIN ABA-RELATED 9 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693088
VERSION     XP_016693088.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837599.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..172
                     /product="protein C2-DOMAIN ABA-RELATED 9 isoform X1"
                     /calculated_mol_wt=19297
     Region          4..151
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..172
                     /gene="LOC107909900"
                     /coded_by="XM_016837599.2:284..802"
                     /db_xref="GeneID:107909900"
ORIGIN      
        1 mdtlgllrir vrrgynlivr dkiasssdpy vvitttqqkv ktnvvkkncn pewcdevsls
       61 ikdlndpiel tvydkdtlga ddpmgtaeid lkpyleaarl rkelqelpng calkkvqpsg
      121 tndladesri lwengritqd mrlklrnves gevliqiewv dipgckgldp df
//
LOCUS       XP_016693089             140 aa            linear   PLN 06-AUG-2024
DEFINITION  protein C2-DOMAIN ABA-RELATED 9 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693089
VERSION     XP_016693089.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837600.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..140
                     /product="protein C2-DOMAIN ABA-RELATED 9 isoform X2"
                     /calculated_mol_wt=15643
     Region          4..119
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..140
                     /gene="LOC107909900"
                     /coded_by="XM_016837600.2:242..664"
                     /db_xref="GeneID:107909900"
ORIGIN      
        1 mdtlgllrir vrrgynlivr dkiasssdpy vvitttqqtv ydkdtlgadd pmgtaeidlk
       61 pyleaarlrk elqelpngca lkkvqpsgtn dladesrilw engritqdmr lklrnvesge
      121 vliqiewvdi pgckgldpdf
//
LOCUS       XP_040944738             367 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944738
VERSION     XP_040944738.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088804.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="uncharacterized protein"
                     /calculated_mol_wt=40352
     Region          105..226
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..367
                     /gene="LOC121214714"
                     /coded_by="XM_041088804.1:321..1424"
                     /db_xref="GeneID:121214714"
ORIGIN      
        1 metiprtetp rhstssgegv hsqnlgsggs stvhyfakhd tvklaehnfl lwkhqlllil
       61 vgyglegfvl gtvlvppvvl vgvdgqltdn paflvhrkqd nfiaswllst vtdeilvhlt
      121 atktsfevwt tiekrfgtts sikiaslrha lysikkaslt vkeylakvkt lsdslmavgs
      181 lvtereqvsv ilsglpmeye sirvfksttl vsldlltnml ldcearhlal laeaplqvnl
      241 vtkyqdnsgg skstysqask kgysgsgrsw shgrtrgtsq gwsrsrpqcq lcrkighvvq
      301 ncyhrfdenf snqspsvnfh qtrdfthsst acssmvpcsg scshsppsqt rlhsnqtwyp
      361 nsgacyt
//
LOCUS       XP_016693090             438 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693090
VERSION     XP_016693090.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837601.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..438
                     /product="uncharacterized protein"
                     /calculated_mol_wt=49355
     Region          <3..78
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     CDS             1..438
                     /gene="LOC107909901"
                     /coded_by="XM_016837601.2:1733..3049"
                     /db_xref="GeneID:107909901"
ORIGIN      
        1 mppgsfttwt glhkafleky fpasrigsir keicgikqlv geslyeywer fkrlcascpq
       61 yqiseqllvq yfyegltpqd rgmidaasgg alvdktpeqa qnlianmaqn rqqfgfrrsd
      121 lgkrmdegqs smmeaqlanl tamvsklmtg gtakaslygi ccleghttdm cltlqeaqan
      181 avfpnqrryd pysatynegw rdhpnlryqn latppgfeqq nsrpynmsqp thqnpsaetk
      241 thsmleqmmk mmadqkketd grfqslesaa kqlqtrasst dvnlgnlqaq vnnrlpsqpv
      301 anprdnvsai tlrsgkelrs ilkkvqnsne edetkvkkvr fsdieeenla lpkadlqpsq
      361 aapkevgksr lqqstalhda tnfeqetrvp elraqatqnt nnqprsyvpk apfpqrlrke
      421 ksddvnaeil etfrkeln
//
LOCUS       XP_016693095             157 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 31 [Gossypium hirsutum].
ACCESSION   XP_016693095
VERSION     XP_016693095.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837606.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..157
                     /product="MLP-like protein 31"
                     /calculated_mol_wt=17478
     Region          5..153
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(10,14,27..28,31,35,42,61,63..64,69,72,74,86,88,90,
                     94,102,104,106,108,119,121,123,125,137..138,140..141,
                     144..145,147..149)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(50..51,53..59)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..157
                     /gene="LOC107909905"
                     /coded_by="XM_016837606.2:359..832"
                     /db_xref="GeneID:107909905"
ORIGIN      
        1 massaliskl eadveikasp kqfhemfahk phhvhhtcyd kiqgcdlheg ewgkvgtivh
       61 wsyvhdgkak kakevveavd pdknlvtfrv iegdlmeeyk sfvitiqvsp ksegsgsvvh
      121 wtleyeklhg giahpetllq fvqdiskdid ahltqas
//
LOCUS       XP_016693093             157 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 31 [Gossypium hirsutum].
ACCESSION   XP_016693093
VERSION     XP_016693093.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837604.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693093.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..157
                     /product="MLP-like protein 31"
                     /calculated_mol_wt=17497
     Region          5..153
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(10,14,27..28,31,35,42,61,63..64,69,72,74,86,88,90,
                     94,102,104,106,108,119,121,123,125,137..138,140..141,
                     144..145,147..149)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(50..51,53..59)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..157
                     /gene="LOC107909902"
                     /coded_by="XM_016837604.2:264..737"
                     /db_xref="GeneID:107909902"
ORIGIN      
        1 mtssaltgkl eadveikasp eqfhemfahk phhvhhtcyd kiqgcdlheg ewgkvgtivh
       61 wsyvhdgkak kakevveavd pdknlvtfrv iegdlmeeyk sfvitiqvsp ksegsgsvvh
      121 wtleyeklhg giehpetllq fvqdvskdid ghltqas
//
LOCUS       XP_016693094             157 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 31 [Gossypium hirsutum].
ACCESSION   XP_016693094
VERSION     XP_016693094.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837605.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..157
                     /product="MLP-like protein 31"
                     /calculated_mol_wt=17454
     Region          5..153
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(10,14,27..28,31,35,42,61,63..64,69,72,74,86,88,90,
                     94..95,102,104,106,108,119,121,123,125,137..138,140..141,
                     144..145,147..149)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(50..51,53..59)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..157
                     /gene="LOC107909904"
                     /coded_by="XM_016837605.1:30..503"
                     /db_xref="GeneID:107909904"
ORIGIN      
        1 massaltgki eadveikasp gqfhemfthk phhvhhtcyd kiqgcdlleg ewgkvgtiis
       61 wryvhdgkak vskqlveamd psknlttfre iegdqlkeyk sfvatlqasp knkgsgsivh
      121 wtveyeklhh giahpdtllq flvdaskdid ahltqpn
//
LOCUS       XP_016693096             561 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ESMERALDA 1 [Gossypium hirsutum].
ACCESSION   XP_016693096
VERSION     XP_016693096.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837607.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..561
                     /product="protein ESMERALDA 1"
                     /calculated_mol_wt=63536
     Region          153..490
                     /region_name="O-FucT_plant"
                     /note="GDP-fucose protein O-fucosyltransferase, plant
                     specific subfamily; cd11299"
                     /db_xref="CDD:211385"
     Site            order(161..164,327,329,407..409,451,470..472)
                     /site_type="other"
                     /note="GDP-Fucose binding site [chemical binding]"
                     /db_xref="CDD:211385"
     CDS             1..561
                     /gene="LOC107909907"
                     /coded_by="XM_016837607.2:352..2037"
                     /db_xref="GeneID:107909907"
ORIGIN      
        1 mhaknripss ghstpsppas plrspryrhg rksgrfspfq pgrtiahrla wlllsvllrr
       61 qgiflfapli yisgmllymg tvsfdvvpvi khrpapgsvy rspqlyeklk idmnadnssa
      121 daistiwkns ykggewrpcv nksfeglpes ngyiyveang glnqqrtsic navavagyln
      181 atllipnfhf hsiwrdpskf kdiydedyfi salkndvrvv nkipeyimer fdnnltnvyn
      241 frikawssiq yykdvvlpkl leekiirisp fanrlsfdap pavqrlrcla nyealrfssp
      301 ilslgetlva rmkelsansg gkyvsvhlrf eedmvafscc vfdggeqeke dmkkarergw
      361 kgkftkpgrv irpgairing kcpltplevg lmlrgmgfdn ntyiflasgk iynaektmap
      421 llemfpnlqt kemlaseeel apyknfssrm aaidytvclh sevfvttqgg nfphflmghr
      481 rylhgghskt irpdkrklal lfdnpnigwk sfkrqmlnmr shsdskgfel krpsdsiytf
      541 pcpdcmchtn ksadsrsssa t
//
LOCUS       XP_016693098             445 aa            linear   PLN 06-AUG-2024
DEFINITION  putative F-box protein At3g29830 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693098
VERSION     XP_016693098.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837609.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693098.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..445
                     /product="putative F-box protein At3g29830 isoform X1"
                     /calculated_mol_wt=50688
     Region          15..49
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(18..19,21..23,26..27,30,41..43,45,48)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(18,22,25..26,29..30,34,36..37,41..43,45)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          169..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          194..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          215..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275379"
     Region          <368..402
                     /region_name="FBD"
                     /note="pfam08387"
                     /db_xref="CDD:462458"
     CDS             1..445
                     /gene="LOC107909908"
                     /coded_by="XM_016837609.2:299..1636"
                     /db_xref="GeneID:107909908"
ORIGIN      
        1 mekgdqgked skdriseltd eilfiilsfl tlkeaanicf lsrrlkilwp hivalnfdas
       61 ntlgelrrng rlrkkkrtwy inwvnhvles hkgstlnefr vcfdldwtcr hdidswfcfa
      121 iskrvrklel dfeevaeetw ppglrsyslt kscfnyirtp qglsciglld slclrfvkvs
      181 gevlehfllh cplleklvve wsknlvtlnv asssplrlry leiraclalq nleisapnlq
      241 sflyygqkva lhienapllt dvliggnldd epafafcpls gylcqlkslt lemsaynmtf
      301 pnfpeltnlr hlavsayggy dddllvltsl idaspslnkl slelniwrss tynhahntsn
      361 vtgkpipslk vvevigfrgf kidvdflayl lehgkvmeki tincchpswa gqilefetik
      421 ererarkhav qlkskspstt efvii
//
LOCUS       XP_040944739             323 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/FBD/LRR-repeat protein At1g16930 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944739
VERSION     XP_040944739.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088805.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..323
                     /product="F-box/FBD/LRR-repeat protein At1g16930 isoform
                     X2"
                     /calculated_mol_wt=36988
     Region          15..49
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(18..19,21..23,26..27,30,41..43,45,48)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(18,22,25..26,29..30,34,36..37,41..43,45)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          <246..280
                     /region_name="FBD"
                     /note="pfam08387"
                     /db_xref="CDD:462458"
     CDS             1..323
                     /gene="LOC107909908"
                     /coded_by="XM_041088805.1:263..1234"
                     /db_xref="GeneID:107909908"
ORIGIN      
        1 mekgdqgked skdriseltd eilfiilsfl tlkeaanicf lsrrlkilwp hivalnfdas
       61 ntlgelrrng rlrkkkrtwy inwvnhvles hkgstlnefr vcfdldwtcr hdidswfcfa
      121 iskrvrklel dfeevaeetw ppggnlddep afafcplsgy lcqlksltle msaynmtfpn
      181 fpeltnlrhl avsayggydd dllvltslid aspslnklsl elniwrssty nhahntsnvt
      241 gkpipslkvv evigfrgfki dvdflaylle hgkvmekiti ncchpswagq ilefetiker
      301 erarkhavql kskspsttef vii
//
LOCUS       XP_040944740             976 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944740
VERSION     XP_040944740.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088806.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..976
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=108768
     Region          43..>414
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          500..>884
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..976
                     /gene="LOC107909909"
                     /coded_by="XM_041088806.1:305..3235"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrselrpl kshldiilpw qspdgqstff lkdeaqtdnf iemylrppsa neearindwi
      301 kvrqsgiryy lslgdqrivd knfiirpkae fevgrmtlgg llalgynvvv sykrastsvn
      361 igslslslet idtlgetflv lrgtdrktvg aealrmgitg qwltksylem ilerkgvprl
      421 ntpplvsats vshnqekdia apkpirttpn lvyqledlaq pwtrsptksk mepvlptwhf
      481 assdrshggs vaatgssafr dtmrlapmpd sydldrglll avqgiqflle nksvpvivgi
      541 ggpsgsgkts lahkmanivg cevvslesyf rpeqvkdfky ddfnsldlpl lsknigdikh
      601 grktkiplfn letgsrscfk eleisedcgv iifegvyalh peirksldlw iavvggvhsh
      661 lisrvqrdks rvgcfmsqne immtvfpifq qhiephlvha hlkirndfdp vlspesslfv
      721 lksnkqvayq dilnildsvk fcssvqnfid iylrlpgtpa nghiaesdcv rvricegrfa
      781 llirepireg nfiiqpkvdf disistvsgl lnlgyqavay ieasaliyqd gkilievdhl
      841 qdapspylqi kgvnkeavaa agsalkldgs yttksylqii lerlplvers ysgihthqaa
      901 rlqelvesiq sqwtkqggst psessqsrev spmdgiiedm qcrirrlerw htintvlwtf
      961 lmsaligysl yqrkrq
//
LOCUS       XP_040944741             975 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944741
VERSION     XP_040944741.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088807.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..975
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=108697
     Region          43..>414
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          499..>883
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..975
                     /gene="LOC107909909"
                     /coded_by="XM_041088807.1:305..3232"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrselrpl kshldiilpw qspdgqstff lkdeaqtdnf iemylrppsa neearindwi
      301 kvrqsgiryy lslgdqrivd knfiirpkae fevgrmtlgg llalgynvvv sykrastsvn
      361 igslslslet idtlgetflv lrgtdrktvg aealrmgitg qwltksylem ilerkgvprl
      421 ntpplvsats vshnqekdia apkpirttpn lvyqledlaq pwtrsptksk mepvlptwhf
      481 assdrshggs vatgssafrd tmrlapmpds ydldrgllla vqgiqfllen ksvpvivgig
      541 gpsgsgktsl ahkmanivgc evvslesyfr peqvkdfkyd dfnsldlpll sknigdikhg
      601 rktkiplfnl etgsrscfke leisedcgvi ifegvyalhp eirksldlwi avvggvhshl
      661 isrvqrdksr vgcfmsqnei mmtvfpifqq hiephlvhah lkirndfdpv lspesslfvl
      721 ksnkqvayqd ilnildsvkf cssvqnfidi ylrlpgtpan ghiaesdcvr vricegrfal
      781 lirepiregn fiiqpkvdfd isistvsgll nlgyqavayi easaliyqdg kilievdhlq
      841 dapspylqik gvnkeavaaa gsalkldgsy ttksylqiil erlplversy sgihthqaar
      901 lqelvesiqs qwtkqggstp sessqsrevs pmdgiiedmq crirrlerwh tintvlwtfl
      961 msaligysly qrkrq
//
LOCUS       XP_040944742             973 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944742
VERSION     XP_040944742.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088808.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..973
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=108525
     Region          43..>414
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          497..>881
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..973
                     /gene="LOC107909909"
                     /coded_by="XM_041088808.1:305..3226"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrselrpl kshldiilpw qspdgqstff lkdeaqtdnf iemylrppsa neearindwi
      301 kvrqsgiryy lslgdqrivd knfiirpkae fevgrmtlgg llalgynvvv sykrastsvn
      361 igslslslet idtlgetflv lrgtdrktvg aealrmgitg qwltksylem ilerkgvprl
      421 ntpplvsats vshnqekdia apkpirttpn lvyqledlaq pwtrsptksk mepvlptwhf
      481 assdrshggs vgssafrdtm rlapmpdsyd ldrglllavq giqfllenks vpvivgiggp
      541 sgsgktslah kmanivgcev vslesyfrpe qvkdfkyddf nsldlpllsk nigdikhgrk
      601 tkiplfnlet gsrscfkele isedcgviif egvyalhpei rksldlwiav vggvhshlis
      661 rvqrdksrvg cfmsqneimm tvfpifqqhi ephlvhahlk irndfdpvls pesslfvlks
      721 nkqvayqdil nildsvkfcs svqnfidiyl rlpgtpangh iaesdcvrvr icegrfalli
      781 repiregnfi iqpkvdfdis istvsgllnl gyqavayiea saliyqdgki lievdhlqda
      841 pspylqikgv nkeavaaags alkldgsytt ksylqiiler lplversysg ihthqaarlq
      901 elvesiqsqw tkqggstpse ssqsrevspm dgiiedmqcr irrlerwhti ntvlwtflms
      961 aligyslyqr krq
//
LOCUS       XP_040944743             972 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944743
VERSION     XP_040944743.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088809.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..972
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=108224
     Region          43..>414
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          500..>884
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..972
                     /gene="LOC107909909"
                     /coded_by="XM_041088809.1:305..3223"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrselrpl kshldiilpw qspdgqstff lkdeaqtdnf iemylrppsa neearindwi
      301 kvrqsgiryy lslgdqrivd knfiirpkae fevgrmtlgg llalgynvvv sykrastsvn
      361 igslslslet idtlgetflv lrgtdrktvg aealrmgitg qwltksylem ilerkgvprl
      421 ntpplvsats vshnqekdia apkpirttpn lvyqledlaq pwtrsptksk mepvlptwhf
      481 assdrshggs vaatgssafr dtmrlapmpd sydldrglll avqgiqflle nksvpvivgi
      541 ggpsgsgkts lahkmanivg cevvslesyf rpeqvkdfky ddfnsldlpl lsknigdikh
      601 grktkiplfn letgsrscfk eleisedcgv iifegvyalh peirksldlw iavvggvhsh
      661 lisrvqrdks rvgcfmsqne immtvfpifq qhiephlvha hlkirndfdp vlspesslfv
      721 lksnkqvayq dilnildsvk fcssvqnfid iylrlpgtpa nghiaesdcv rvricegrfa
      781 llirepireg nfiiqpkvdf disistvsgl lnlgyqavay ieasaliyqd gkilievdhl
      841 qdapspylqi kgvnkeavaa agsalkldgs yttksylqii lerlplvers ysgihthqaa
      901 rlqelvesiq sqggstpses sqsrevspmd giiedmqcri rrlerwhtin tvlwtflmsa
      961 ligyslyqrk rq
//
LOCUS       XP_016693099             961 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693099
VERSION     XP_016693099.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837610.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..961
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=106957
     Region          43..>399
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          485..>869
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..961
                     /gene="LOC107909909"
                     /coded_by="XM_016837610.2:305..3190"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrsespdg qstfflkdea qtdnfiemyl rppsaneear indwikvrqs giryylslgd
      301 qrivdknfii rpkaefevgr mtlggllalg ynvvvsykra stsvnigsls lsletidtlg
      361 etflvlrgtd rktvgaealr mgitgqwltk sylemilerk gvprlntppl vsatsvshnq
      421 ekdiaapkpi rttpnlvyql edlaqpwtrs ptkskmepvl ptwhfassdr shggsvaatg
      481 ssafrdtmrl apmpdsydld rglllavqgi qfllenksvp vivgiggpsg sgktslahkm
      541 anivgcevvs lesyfrpeqv kdfkyddfns ldlpllskni gdikhgrktk iplfnletgs
      601 rscfkeleis edcgviifeg vyalhpeirk sldlwiavvg gvhshlisrv qrdksrvgcf
      661 msqneimmtv fpifqqhiep hlvhahlkir ndfdpvlspe sslfvlksnk qvayqdilni
      721 ldsvkfcssv qnfidiylrl pgtpanghia esdcvrvric egrfallire piregnfiiq
      781 pkvdfdisis tvsgllnlgy qavayieasa liyqdgkili evdhlqdaps pylqikgvnk
      841 eavaaagsal kldgsyttks ylqiilerlp lversysgih thqaarlqel vesiqsqwtk
      901 qggstpsess qsrevspmdg iiedmqcrir rlerwhtint vlwtflmsal igyslyqrkr
      961 q
//
LOCUS       XP_016693101             958 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693101
VERSION     XP_016693101.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837612.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..958
                     /product="uncharacterized protein isoform X6"
                     /calculated_mol_wt=106714
     Region          43..>399
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          482..>866
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..958
                     /gene="LOC107909909"
                     /coded_by="XM_016837612.2:305..3181"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrsespdg qstfflkdea qtdnfiemyl rppsaneear indwikvrqs giryylslgd
      301 qrivdknfii rpkaefevgr mtlggllalg ynvvvsykra stsvnigsls lsletidtlg
      361 etflvlrgtd rktvgaealr mgitgqwltk sylemilerk gvprlntppl vsatsvshnq
      421 ekdiaapkpi rttpnlvyql edlaqpwtrs ptkskmepvl ptwhfassdr shggsvgssa
      481 frdtmrlapm pdsydldrgl llavqgiqfl lenksvpviv giggpsgsgk tslahkmani
      541 vgcevvsles yfrpeqvkdf kyddfnsldl pllsknigdi khgrktkipl fnletgsrsc
      601 fkeleisedc gviifegvya lhpeirksld lwiavvggvh shlisrvqrd ksrvgcfmsq
      661 neimmtvfpi fqqhiephlv hahlkirndf dpvlspessl fvlksnkqva yqdilnilds
      721 vkfcssvqnf idiylrlpgt panghiaesd cvrvricegr fallirepir egnfiiqpkv
      781 dfdisistvs gllnlgyqav ayieasaliy qdgkilievd hlqdapspyl qikgvnkeav
      841 aaagsalkld gsyttksylq iilerlplve rsysgihthq aarlqelves iqsqwtkqgg
      901 stpsessqsr evspmdgiie dmqcrirrle rwhtintvlw tflmsaligy slyqrkrq
//
LOCUS       XP_016693102             957 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693102
VERSION     XP_016693102.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837613.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..957
                     /product="uncharacterized protein isoform X7"
                     /calculated_mol_wt=106413
     Region          43..>399
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          485..>869
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..957
                     /gene="LOC107909909"
                     /coded_by="XM_016837613.2:305..3178"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrsespdg qstfflkdea qtdnfiemyl rppsaneear indwikvrqs giryylslgd
      301 qrivdknfii rpkaefevgr mtlggllalg ynvvvsykra stsvnigsls lsletidtlg
      361 etflvlrgtd rktvgaealr mgitgqwltk sylemilerk gvprlntppl vsatsvshnq
      421 ekdiaapkpi rttpnlvyql edlaqpwtrs ptkskmepvl ptwhfassdr shggsvaatg
      481 ssafrdtmrl apmpdsydld rglllavqgi qfllenksvp vivgiggpsg sgktslahkm
      541 anivgcevvs lesyfrpeqv kdfkyddfns ldlpllskni gdikhgrktk iplfnletgs
      601 rscfkeleis edcgviifeg vyalhpeirk sldlwiavvg gvhshlisrv qrdksrvgcf
      661 msqneimmtv fpifqqhiep hlvhahlkir ndfdpvlspe sslfvlksnk qvayqdilni
      721 ldsvkfcssv qnfidiylrl pgtpanghia esdcvrvric egrfallire piregnfiiq
      781 pkvdfdisis tvsgllnlgy qavayieasa liyqdgkili evdhlqdaps pylqikgvnk
      841 eavaaagsal kldgsyttks ylqiilerlp lversysgih thqaarlqel vesiqsqggs
      901 tpsessqsre vspmdgiied mqcrirrler whtintvlwt flmsaligys lyqrkrq
//
LOCUS       XP_040944744             881 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944744
VERSION     XP_040944744.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088810.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..881
                     /product="uncharacterized protein isoform X8"
                     /calculated_mol_wt=98611
     Region          1..>319
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          405..>789
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..881
                     /gene="LOC107909909"
                     /coded_by="XM_041088810.1:155..2800"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 menyrggtde gtdldsidfd alirnledlt egkdtkipvf dfhqkkrvgs kaiksamsgv
       61 vivdgtyalh aklrslldir vavvggvhfs llskvrydig dscsldylid sifplfrkhi
      121 epdlhhaqir innsfvssfr eaiyklkcrs elrplkshld iilpwqspdg qstfflkdea
      181 qtdnfiemyl rppsaneear indwikvrqs giryylslgd qrivdknfii rpkaefevgr
      241 mtlggllalg ynvvvsykra stsvnigsls lsletidtlg etflvlrgtd rktvgaealr
      301 mgitgqwltk sylemilerk gvprlntppl vsatsvshnq ekdiaapkpi rttpnlvyql
      361 edlaqpwtrs ptkskmepvl ptwhfassdr shggsvaatg ssafrdtmrl apmpdsydld
      421 rglllavqgi qfllenksvp vivgiggpsg sgktslahkm anivgcevvs lesyfrpeqv
      481 kdfkyddfns ldlpllskni gdikhgrktk iplfnletgs rscfkeleis edcgviifeg
      541 vyalhpeirk sldlwiavvg gvhshlisrv qrdksrvgcf msqneimmtv fpifqqhiep
      601 hlvhahlkir ndfdpvlspe sslfvlksnk qvayqdilni ldsvkfcssv qnfidiylrl
      661 pgtpanghia esdcvrvric egrfallire piregnfiiq pkvdfdisis tvsgllnlgy
      721 qavayieasa liyqdgkili evdhlqdaps pylqikgvnk eavaaagsal kldgsyttks
      781 ylqiilerlp lversysgih thqaarlqel vesiqsqwtk qggstpsess qsrevspmdg
      841 iiedmqcrir rlerwhtint vlwtflmsal igyslyqrkr q
//
LOCUS       XP_040944745             814 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944745
VERSION     XP_040944745.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088811.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..814
                     /product="uncharacterized protein isoform X9"
                     /calculated_mol_wt=90443
     Region          43..>414
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     Region          500..>814
                     /region_name="PLN02318"
                     /note="phosphoribulokinase/uridine kinase"
                     /db_xref="CDD:177952"
     CDS             1..814
                     /gene="LOC107909909"
                     /coded_by="XM_041088811.1:305..2749"
                     /db_xref="GeneID:107909909"
ORIGIN      
        1 mddevvqrvf qeggrdyfqq qpstststss sssilqslpl hvsfdhgyyl lvksiqelre
       61 kkeglvtvgi ggpsgsgkts laekvasvig ctvipmenyr ggtdegtdld sidfdalirn
      121 ledltegkdt kipvfdfhqk krvgskaiks amsgvvivdg tyalhaklrs lldirvavvg
      181 gvhfsllskv rydigdscsl dylidsifpl frkhiepdlh haqirinnsf vssfreaiyk
      241 lkcrselrpl kshldiilpw qspdgqstff lkdeaqtdnf iemylrppsa neearindwi
      301 kvrqsgiryy lslgdqrivd knfiirpkae fevgrmtlgg llalgynvvv sykrastsvn
      361 igslslslet idtlgetflv lrgtdrktvg aealrmgitg qwltksylem ilerkgvprl
      421 ntpplvsats vshnqekdia apkpirttpn lvyqledlaq pwtrsptksk mepvlptwhf
      481 assdrshggs vaatgssafr dtmrlapmpd sydldrglll avqgiqflle nksvpvivgi
      541 ggpsgsgkts lahkmanivg cevvslesyf rpeqvkdfky ddfnsldlpl lsknigdikh
      601 grktkiplfn letgsrscfk eleisedcgv iifegvyalh peirksldlw iavvggvhsh
      661 lisrvqrdks rvgcfmsqne immtvfpifq qhiephlvha hlkirndfdp vlspesslfv
      721 lksnkqvayq dilnildsvk fcssvqnfid iylrlpgtpa nghiaesdcv rvricegrfa
      781 llirepireg nfiiqpkvdf disistvsgl lnlg
//
LOCUS       XP_016693107             125 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693107
VERSION     XP_016693107.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837618.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14126
     CDS             1..125
                     /gene="LOC107909913"
                     /coded_by="XM_016837618.2:362..739"
                     /db_xref="GeneID:107909913"
ORIGIN      
        1 mmlynlldgv keilkiqkfr rivsytgfyc fvavlsyayt nnttragysr adqfyasypa
       61 gtelltdtak lykaalgncf eseewspief cimakhfdrq gkspyayhsq ymahllshgq
      121 ldgsg
//
LOCUS       XP_016693109             454 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 50 [Gossypium hirsutum].
ACCESSION   XP_016693109
VERSION     XP_016693109.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837620.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..454
                     /product="serine carboxypeptidase-like 50"
                     /calculated_mol_wt=50348
     Region          40..433
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..454
                     /gene="LOC107909915"
                     /coded_by="XM_016837620.2:653..2017"
                     /db_xref="GeneID:107909915"
ORIGIN      
        1 marsrsttts affflclyss fyltasttpl fpkdalptks gylpvnhatg saifyafyea
       61 qtptsplskt plliwlqggp gcssmignlf elgpwrvvss hmknahnltl ernpgswnrl
      121 fgllfldnpi gtgfsiastp qeiprdqlsv akhlfaaitg ftsldplfkd rpiyitgesy
      181 agkyvpaigy yilkknpqlp vsrrvnfrgv aigdgltdpv tqvtthadna yycglvnerq
      241 kgeleeaqre avelvkmgnw seatnarskv lsrlqnmtgl atlydftkki pyqtefavrf
      301 lniaevkral gvnesmvfee csdvvgdvlh edvmksvkym veflvknskv llyqglydlr
      361 dgvvsteawv ktmkwegiek fkmadrviwk vngelagylq kwgsltnvvv sgaghllpad
      421 qalnsqamte dwvlekgqfg gkqrgsstkf ratl
//
LOCUS       XP_016693110             145 aa            linear   PLN 06-AUG-2024
DEFINITION  mediator of RNA polymerase II transcription subunit 23-like
            [Gossypium hirsutum].
ACCESSION   XP_016693110
VERSION     XP_016693110.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837621.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693110.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..145
                     /product="mediator of RNA polymerase II transcription
                     subunit 23-like"
                     /calculated_mol_wt=16250
     CDS             1..145
                     /gene="LOC107909916"
                     /coded_by="XM_016837621.2:30..467"
                     /db_xref="GeneID:107909916"
ORIGIN      
        1 mfwvvsytma qpacetvmnw lssggvtell peanvqpner fmvmrevspl pisllsgfsm
       61 nlylklvfqm eeslfagqvv psiamvetyt rllliaphsl fcshfshlaq rnasllskpa
      121 vtllvleivn yrllppyrcr dpqvc
//
LOCUS       XP_040944746            1028 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944746
VERSION     XP_040944746.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088812.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1028
                     /product="ATP-dependent DNA helicase homolog RECG,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=114635
     Region          294..997
                     /region_name="recG"
                     /note="ATP-dependent DNA helicase RecG; TIGR00643"
                     /db_xref="CDD:273192"
     CDS             1..1028
                     /gene="LOC107909918"
                     /coded_by="XM_041088812.1:215..3301"
                     /db_xref="GeneID:107909918"
ORIGIN      
        1 maltvsnvls ctmcftgkgl rsaivfeaer sytnalgrkm rfhnylfnkv skiysrskhk
       61 fpeklleevh nydtasisgr skllnkvsvl mgysglhdlf enerpdeqpd rnledatddf
      121 dlslackrfp sitlgsslpv elydeatsss rirallaaqr flsnsmdekw vdpnglsetw
      181 dslyeplsea gssaalqest gshqsswstt lesegksdhl ltveentekl dqsswsvtle
      241 fegksdhlva kevssskvgv qrhsdiatid lfldrsisci pglskrhsrq leecgfytlr
      301 kllhhfprty adlqnaqtei ddgqylifvg kimssrgira sytfsflevi vgcevanngt
      361 tseqiydgsd tkgektiylh lkkffrgarf ashpflksie gkhklgelvc vsgkvralsk
      421 dhyemreysi dvlkdendss vitkgrpypi ypskgglkpc flrdiipral qavqvnidpi
      481 peeitkefgl lclndayvgi hqpknieead larrriifde ffylqlgrlf qmleglgtki
      541 ekdgllekyr kpevnaayme ewssltkkfl kalpysltsg qlsaiseiiw dlkrpvpmnr
      601 llqgdvgcgk tivaflacve viasgyqaaf mvptellaiq hydhfvdllg kmdevdnkps
      661 valltgstpl kqsrlirkdl qsgnislvig thcliaekve fsslriavvd eqhrfgviqr
      721 gkfnsklyct stssrmqaad tdissehdih maphilalsa tpiprtlala lygdmsltni
      781 tdlppgripv etyiiegtdn gfkniyamml eeleaggrly ivypvieqsd qlpqlraasa
      841 dletisnqfq dyncgllhgr mkgdekeeal rkfrsgetdi llstqvieig vdvpdasmmv
      901 vmnaerfgia qlhqlrgrvg rgakkskcil vassssslnr lkvlekssdg fhlasvdlrl
      961 rgpgdllgkk qsghlpefpi arlemdgnil qeahvaalkv lsyshdlelf palkaelsmr
     1021 qplcilgd
//
LOCUS       XP_016693112            1028 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693112
VERSION     XP_016693112.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837623.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1028
                     /product="ATP-dependent DNA helicase homolog RECG,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=114635
     Region          294..997
                     /region_name="recG"
                     /note="ATP-dependent DNA helicase RecG; TIGR00643"
                     /db_xref="CDD:273192"
     CDS             1..1028
                     /gene="LOC107909918"
                     /coded_by="XM_016837623.2:298..3384"
                     /db_xref="GeneID:107909918"
ORIGIN      
        1 maltvsnvls ctmcftgkgl rsaivfeaer sytnalgrkm rfhnylfnkv skiysrskhk
       61 fpeklleevh nydtasisgr skllnkvsvl mgysglhdlf enerpdeqpd rnledatddf
      121 dlslackrfp sitlgsslpv elydeatsss rirallaaqr flsnsmdekw vdpnglsetw
      181 dslyeplsea gssaalqest gshqsswstt lesegksdhl ltveentekl dqsswsvtle
      241 fegksdhlva kevssskvgv qrhsdiatid lfldrsisci pglskrhsrq leecgfytlr
      301 kllhhfprty adlqnaqtei ddgqylifvg kimssrgira sytfsflevi vgcevanngt
      361 tseqiydgsd tkgektiylh lkkffrgarf ashpflksie gkhklgelvc vsgkvralsk
      421 dhyemreysi dvlkdendss vitkgrpypi ypskgglkpc flrdiipral qavqvnidpi
      481 peeitkefgl lclndayvgi hqpknieead larrriifde ffylqlgrlf qmleglgtki
      541 ekdgllekyr kpevnaayme ewssltkkfl kalpysltsg qlsaiseiiw dlkrpvpmnr
      601 llqgdvgcgk tivaflacve viasgyqaaf mvptellaiq hydhfvdllg kmdevdnkps
      661 valltgstpl kqsrlirkdl qsgnislvig thcliaekve fsslriavvd eqhrfgviqr
      721 gkfnsklyct stssrmqaad tdissehdih maphilalsa tpiprtlala lygdmsltni
      781 tdlppgripv etyiiegtdn gfkniyamml eeleaggrly ivypvieqsd qlpqlraasa
      841 dletisnqfq dyncgllhgr mkgdekeeal rkfrsgetdi llstqvieig vdvpdasmmv
      901 vmnaerfgia qlhqlrgrvg rgakkskcil vassssslnr lkvlekssdg fhlasvdlrl
      961 rgpgdllgkk qsghlpefpi arlemdgnil qeahvaalkv lsyshdlelf palkaelsmr
     1021 qplcilgd
//
LOCUS       XP_016693113            1028 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016693113
VERSION     XP_016693113.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837624.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1028
                     /product="ATP-dependent DNA helicase homolog RECG,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=114635
     Region          294..997
                     /region_name="recG"
                     /note="ATP-dependent DNA helicase RecG; TIGR00643"
                     /db_xref="CDD:273192"
     CDS             1..1028
                     /gene="LOC107909918"
                     /coded_by="XM_016837624.2:236..3322"
                     /db_xref="GeneID:107909918"
ORIGIN      
        1 maltvsnvls ctmcftgkgl rsaivfeaer sytnalgrkm rfhnylfnkv skiysrskhk
       61 fpeklleevh nydtasisgr skllnkvsvl mgysglhdlf enerpdeqpd rnledatddf
      121 dlslackrfp sitlgsslpv elydeatsss rirallaaqr flsnsmdekw vdpnglsetw
      181 dslyeplsea gssaalqest gshqsswstt lesegksdhl ltveentekl dqsswsvtle
      241 fegksdhlva kevssskvgv qrhsdiatid lfldrsisci pglskrhsrq leecgfytlr
      301 kllhhfprty adlqnaqtei ddgqylifvg kimssrgira sytfsflevi vgcevanngt
      361 tseqiydgsd tkgektiylh lkkffrgarf ashpflksie gkhklgelvc vsgkvralsk
      421 dhyemreysi dvlkdendss vitkgrpypi ypskgglkpc flrdiipral qavqvnidpi
      481 peeitkefgl lclndayvgi hqpknieead larrriifde ffylqlgrlf qmleglgtki
      541 ekdgllekyr kpevnaayme ewssltkkfl kalpysltsg qlsaiseiiw dlkrpvpmnr
      601 llqgdvgcgk tivaflacve viasgyqaaf mvptellaiq hydhfvdllg kmdevdnkps
      661 valltgstpl kqsrlirkdl qsgnislvig thcliaekve fsslriavvd eqhrfgviqr
      721 gkfnsklyct stssrmqaad tdissehdih maphilalsa tpiprtlala lygdmsltni
      781 tdlppgripv etyiiegtdn gfkniyamml eeleaggrly ivypvieqsd qlpqlraasa
      841 dletisnqfq dyncgllhgr mkgdekeeal rkfrsgetdi llstqvieig vdvpdasmmv
      901 vmnaerfgia qlhqlrgrvg rgakkskcil vassssslnr lkvlekssdg fhlasvdlrl
      961 rgpgdllgkk qsghlpefpi arlemdgnil qeahvaalkv lsyshdlelf palkaelsmr
     1021 qplcilgd
//
LOCUS       XP_040944747             999 aa            linear   PLN 06-AUG-2024
DEFINITION  ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944747
VERSION     XP_040944747.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088813.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..999
                     /product="ATP-dependent DNA helicase homolog RECG,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=111402
     Region          294..997
                     /region_name="recG"
                     /note="ATP-dependent DNA helicase RecG; TIGR00643"
                     /db_xref="CDD:273192"
     CDS             1..999
                     /gene="LOC107909918"
                     /coded_by="XM_041088813.1:215..3214"
                     /db_xref="GeneID:107909918"
ORIGIN      
        1 maltvsnvls ctmcftgkgl rsaivfeaer sytnalgrkm rfhnylfnkv skiysrskhk
       61 fpeklleevh nydtasisgr skllnkvsvl mgysglhdlf enerpdeqpd rnledatddf
      121 dlslackrfp sitlgsslpv elydeatsss rirallaaqr flsnsmdekw vdpnglsetw
      181 dslyeplsea gssaalqest gshqsswstt lesegksdhl ltveentekl dqsswsvtle
      241 fegksdhlva kevssskvgv qrhsdiatid lfldrsisci pglskrhsrq leecgfytlr
      301 kllhhfprty adlqnaqtei ddgqylifvg kimssrgira sytfsflevi vgcevanngt
      361 tseqiydgsd tkgektiylh lkkffrgarf ashpflksie gkhklgelvc vsgkvralsk
      421 dhyemreysi dvlkdendss vitkgrpypi ypskgglkpc flrdiipral qavqvnidpi
      481 peeitkefgl lclndayvgi hqpknieead larrriifde ffylqlgrlf qmleglgtki
      541 ekdgllekyr kpevnaayme ewssltkkfl kalpysltsg qlsaiseiiw dlkrpvpmnr
      601 llqgdvgcgk tivaflacve viasgyqaaf mvptellaiq hydhfvdllg kmdevdnkps
      661 valltgstpl kqsrlirkdl qsgnislvig thcliaekve fsslriavvd eqhrfgviqr
      721 gkfnsklyct stssrmqaad tdissehdih maphilalsa tpiprtlala lygdmsltni
      781 tdlppgripv etyiiegtdn gfkniyamml eeleaggrly ivypvieqsd qlpqlraasa
      841 dletisnqfq dyncgllhgr mkgdekeeal rkfrsgetdi llstqvieig vdvpdasmmv
      901 vmnaerfgia qlhqlrgrvg rgakkskcil vassssslnr lkvlekssdg fhlasvdlrl
      961 rgpgdllgkk qsghlpefpi arlemdgnil qeahvaalh
//
LOCUS       XP_016693267             221 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MALE DISCOVERER 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693267
VERSION     XP_016693267.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837778.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="protein MALE DISCOVERER 2 isoform X1"
                     /calculated_mol_wt=24602
     Region          34..>174
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     CDS             1..221
                     /gene="LOC107910040"
                     /coded_by="XM_016837778.2:127..792"
                     /db_xref="GeneID:107910040"
ORIGIN      
        1 myglwgferl klkmmvvmll mlvlslfeqn msfssplnse glallrfkqr vvsdpfsals
       61 nwkeidgeid pcswfgvecs dekvvilnlk dlclvgnlgp efgklenlks iilrnnsfsg
      121 sipqeigelk elelldlgfn nfsgpfpsdf gnnlslttll ldnneflgnl apeiyevkml
      181 sefqvdenrl tdaatipsck tsgfpciasi sdcyschmmn e
//
LOCUS       XP_016693268             205 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MALE DISCOVERER 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693268
VERSION     XP_016693268.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..205
                     /product="protein MALE DISCOVERER 2 isoform X2"
                     /calculated_mol_wt=22813
     Region          34..>174
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     CDS             1..205
                     /gene="LOC107910040"
                     /coded_by="XM_016837779.2:124..741"
                     /db_xref="GeneID:107910040"
ORIGIN      
        1 myglwgferl klkmmvvmll mlvlslfeqn msfssplnse glallrfkqr vvsdpfsals
       61 nwkeidgeid pcswfgvecs dekvvilnlk dlclvgnlgp efgklenlks iilrnnsfsg
      121 sipqeigelk elelldlgfn nfsgpfpsdf gnnlslttll ldnneflgnl apeiyevkml
      181 sefqvdenrl tdaatipsck tsgfp
//
LOCUS       XP_040944748             200 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944748
VERSION     XP_040944748.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088814.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20785
     CDS             1..200
                     /gene="LOC121214718"
                     /coded_by="XM_041088814.1:1435..2037"
                     /db_xref="GeneID:121214718"
ORIGIN      
        1 mrlmvniclh vghlgfmlnm ifmvgphsng piggapgmrp tgsigddpah dgplllstkl
       61 carvynrsdp ciglprlgkl casdysdspg sllntaqves nggddsyvpv nvgttswypd
      121 sgashhvcrn vsalhdatpy lgmssllmgd gspavislig naiiptpsks lclsnvlcvp
      181 sirknllsvs qsahdngvff
//
LOCUS       XP_016693265             635 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 [Gossypium hirsutum].
ACCESSION   XP_016693265
VERSION     XP_016693265.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837776.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693265.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..635
                     /product="protein WVD2-like 7"
                     /calculated_mol_wt=69270
     Region          416..486
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..635
                     /gene="LOC107910037"
                     /coded_by="XM_016837776.2:330..2237"
                     /db_xref="GeneID:107910037"
ORIGIN      
        1 magefqepfn isflteslhs gsisfgrfen eplawerrss fshnkyleev ekfskpglvi
       61 ekkayfeahf rkkalllqgs segqtggedq tcendavene gyreyqvven haaenkhyee
      121 gsdslskdsh cnhfgengld dadcredfcc gsgnegnqsg danegslcah fdngledsky
      181 htegaliecg leypgglsty ethvlvpgdv kpeespesei gcdtplisnd kpdkkveenh
      241 ddnavsides fksrnpspcs gttgevdpak leirqnhspk lkpaivkatk prlkspspdh
      301 srknissdps kaaarvlerk ekeinrrtka eklpsrtatp trrlmhrspn kedserdnak
      361 lntehksvkg amakkviear pslskkiepv ahqtpnrlkq tisstkadvk lsagafqfks
      421 geraerrkef smkveekmhs kevqmnqiqa rkqekteaei kqlrkslnfk akpmpsfyhv
      481 atapgsngnk aasstikpak vlpkaaspgv gatvrsqpls kqankevfst gelnfcrves
      541 ssqsgiisst pptgspgssa sltqnivllk kergkegsnl pkhgtsekgk vikdrknggm
      601 pkvgaegmkk nnmksagiva naigssigrl tvvas
//
LOCUS       XP_016693266             152 aa            linear   PLN 06-AUG-2024
DEFINITION  proline-rich antigen homolog [Gossypium hirsutum].
ACCESSION   XP_016693266
VERSION     XP_016693266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..152
                     /product="proline-rich antigen homolog"
                     /calculated_mol_wt=16221
     CDS             1..152
                     /gene="LOC107910038"
                     /coded_by="XM_016837777.2:593..1051"
                     /db_xref="GeneID:107910038"
ORIGIN      
        1 maktllnkpl itfffffffs ffiqtkqdnp cpypcfpppt gtgggggggt vtqtppasys
       61 ppsqtgaypp ptgnlpyyyp pppygggnsl ygqpppdpil pyfpyyyrkp phqtddqsaa
      121 atvgpgrsll ittattnlvv fiilvisslg nf
//
LOCUS       XP_040944749             138 aa            linear   PLN 06-AUG-2024
DEFINITION  pollen-specific leucine-rich repeat extensin-like protein 4
            [Gossypium hirsutum].
ACCESSION   XP_040944749
VERSION     XP_040944749.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088815.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..138
                     /product="pollen-specific leucine-rich repeat
                     extensin-like protein 4"
                     /calculated_mol_wt=14503
     CDS             1..138
                     /gene="LOC107910036"
                     /coded_by="XM_041088815.1:295..711"
                     /db_xref="GeneID:107910036"
ORIGIN      
        1 msiktnhfhp lflfltisfl iatvaypida lesrkldest vpgdqgikct pscvqspppp
       61 sppppspppp sppalppptp kkspsqycpp ppsppsfiyi tgppgnlypi dqnfgaasrk
      121 fevgllalvs gllvllaf
//
LOCUS       XP_016693263             175 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693263
VERSION     XP_016693263.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837774.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="chaperone protein DnaJ isoform X1"
                     /calculated_mol_wt=20109
     Region          10..78
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(40..42,55,58..59,62..63)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..175
                     /gene="LOC107910035"
                     /coded_by="XM_016837774.2:231..758"
                     /db_xref="GeneID:107910035"
ORIGIN      
        1 mmegepalps yynvlgvkvd asiqdikray rklameqqwh pdrwtrtpsl lseakhkfqq
       61 iqeaysvlsd qrkrtlydag lydpedeede gfsdfmeemi slmsqtrkee kvcsleelqk
      121 mlwdmaqgfe spswfcgpie eggsskrtkw dssgmsdrpg glgvtgfnmy etrsy
//
LOCUS       XP_016693264             173 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein DnaJ isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693264
VERSION     XP_016693264.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837775.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..173
                     /product="chaperone protein DnaJ isoform X2"
                     /calculated_mol_wt=19851
     Region          10..76
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(38..40,53,56..57,60..61)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..173
                     /gene="LOC107910035"
                     /coded_by="XM_016837775.2:290..811"
                     /db_xref="GeneID:107910035"
ORIGIN      
        1 mmegepalps yynvlgvkvd asiqdikray rklamqwhpd rwtrtpslls eakhkfqqiq
       61 eaysvlsdqr krtlydagly dpedeedegf sdfmeemisl msqtrkeekv csleelqkml
      121 wdmaqgfesp swfcgpieeg gsskrtkwds sgmsdrpggl gvtgfnmyet rsy
//
LOCUS       XP_016693256            1636 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016693256
VERSION     XP_016693256.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837767.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693256.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1636
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X1"
                     /calculated_mol_wt=184224
     Region          294..566
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1364..1627
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1411,1420,1422,1482..1485,1496,1515,1562,1577..1578)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1636
                     /gene="LOC107910033"
                     /coded_by="XM_016837767.2:2940..7850"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mmstkfckfc cdgvnvrres rgmkycdkvh pslcessepp spcfvnpeti ksdslapyle
       61 aydceftmqs vtsksitsfs thsspvsicr sacrcrsdee dahdfgkhfl spstkycqdv
      121 snvdshslsg rhdfyscksv gsspsvspfr nnftpyrvgi svqkkqegsp maqyvapfyq
      181 enmdalrkpn igteepdniy dysddfifqn qneksqklld fenngliwfp pppedendei
      241 esnfftydde dddigdsgam fssssslssm fparekqneg nkeplraiiq ghfralvlql
      301 llgegikvgk ednagdwldi ittiawqaak fvkpdtskgg smdpgdyvkv kciasgnpse
      361 stlvkgvvcs knikhkrmts qyknprllll ggalefqkvp nqlasfstll qqendhlkmi
      421 iakikalhpn vllveksvss yaqeylleke islvlnvkrp lleriarcsg alvcpsidnl
      481 siarlghcel frvkkvseeh eisnqlnkkp sktlmffegc prrlgctvll rgrsreelkk
      541 vkhvvqyaif aayhlslets fladegatlp kmkvkhsiir pekmqsdnvi lvapssfyps
      601 nfnaignsfa qndaspslnp kqgglesfpn qddqihisps fggsilgtcn ddltpivdmd
      661 lcsleqlsrl qmppmfpcdi rdfpqsemrd tmteeerhnm heleksekii edeassgcfl
      721 atdthqsilv sfssrcvlkg tvcersrlfr ikfygsfdkp lgrylqddlf dqafccqscn
      781 epteahvicy thrqgnltin vrclsslklp gerdgkiwmw hrclrcvhid gvppathrvv
      841 msdaawglsf gkflelsfsn hatanrvatc ghslqrdclr fygfgnmiai fryspidils
      901 vhlppsmlef sgdiqqewir keaaelmvkv emlyaevldv ldnieqknns snasdlsnri
      961 melrdqiqke rndyisllqp tvietshldl tatdilelnr lkrslliglh vwdrrlnsld
     1021 shlrkgsafk gelglskdgk ldayqqntyk sadsleppks darleqnssl ptfesdvpke
     1081 ldlalcienr eeneetdesi hsptstlser idsawtstdl ltlkvqspea fqgnelqtrl
     1141 vkptskidnl plrkvasptr vhsfdsalrl qariqkglhp stlhlstlks fhatrdyrtm
     1201 vgdpvsnvts tysytfpfea qklnlllrst ptlincashv aegarlllvq rgpsdiviav
     1261 ydndpasiis yaliskeyee wvddksikig ggwsvadrsk kdsatssfsp wqsfgsldmd
     1321 ythfgsfgse dtsssigamf tntkrsphlt vcfeddsyvg ggmvkfsvtc yfakqfdslr
     1381 rkccpnevdf vrslsrcqkw saqggksnvy fakslderfi ikqvqktele sfnefapeyf
     1441 kylsdslssg sptclakilg iyqvsvkylk ggketkmdlv vmenlffrrs isrtydlkgs
     1501 arsrynpdtl grnkvlldmn lletlrtepi flgskakril eraiwndtsf lasiavmdys
     1561 llvgvdeehk elvlgiidfm rqytwdkhle twvkasgilg gpknasptii spkqykkrfr
     1621 kamttyfltv pdqwtl
//
LOCUS       XP_016693257            1614 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016693257
VERSION     XP_016693257.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837768.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693257.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1614
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X2"
                     /calculated_mol_wt=181687
     Region          272..544
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1342..1605
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1389,1398,1400,1460..1463,1474,1493,1540,1555..1556)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1614
                     /gene="LOC107910033"
                     /coded_by="XM_016837768.2:326..5170"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mkycdkvhps lcesseppsp cfvnpetiks dslapyleay dceftmqsvt sksitsfsth
       61 sspvsicrsa crcrsdeeda hdfgkhflsp stkycqdvsn vdshslsgrh dfyscksvgs
      121 spsvspfrnn ftpyrvgisv qkkqegspma qyvapfyqen mdalrkpnig teepdniydy
      181 sddfifqnqn eksqklldfe nngliwfppp pedendeies nfftyddedd digdsgamfs
      241 sssslssmfp arekqnegnk eplraiiqgh fralvlqlll gegikvgked nagdwldiit
      301 tiawqaakfv kpdtskggsm dpgdyvkvkc iasgnpsest lvkgvvcskn ikhkrmtsqy
      361 knprllllgg alefqkvpnq lasfstllqq endhlkmiia kikalhpnvl lveksvssya
      421 qeyllekeis lvlnvkrpll eriarcsgal vcpsidnlsi arlghcelfr vkkvseehei
      481 snqlnkkpsk tlmffegcpr rlgctvllrg rsreelkkvk hvvqyaifaa yhlsletsfl
      541 adegatlpkm kvkhsiirpe kmqsdnvilv apssfypsnf naignsfaqn daspslnpkq
      601 gglesfpnqd dqihispsfg gsilgtcndd ltpivdmdlc sleqlsrlqm ppmfpcdird
      661 fpqsemrdtm teeerhnmhe leksekiied eassgcflat dthqsilvsf ssrcvlkgtv
      721 cersrlfrik fygsfdkplg rylqddlfdq afccqscnep teahvicyth rqgnltinvr
      781 clsslklpge rdgkiwmwhr clrcvhidgv ppathrvvms daawglsfgk flelsfsnha
      841 tanrvatcgh slqrdclrfy gfgnmiaifr yspidilsvh lppsmlefsg diqqewirke
      901 aaelmvkvem lyaevldvld nieqknnssn asdlsnrime lrdqiqkern dyisllqptv
      961 ietshldlta tdilelnrlk rslliglhvw drrlnsldsh lrkgsafkge lglskdgkld
     1021 ayqqntyksa dsleppksda rleqnsslpt fesdvpkeld lalcienree neetdesihs
     1081 ptstlserid sawtstdllt lkvqspeafq gnelqtrlvk ptskidnlpl rkvasptrvh
     1141 sfdsalrlqa riqkglhpst lhlstlksfh atrdyrtmvg dpvsnvtsty sytfpfeaqk
     1201 lnlllrstpt lincashvae garlllvqrg psdiviavyd ndpasiisya liskeyeewv
     1261 ddksikiggg wsvadrskkd satssfspwq sfgsldmdyt hfgsfgsedt sssigamftn
     1321 tkrsphltvc feddsyvggg mvkfsvtcyf akqfdslrrk ccpnevdfvr slsrcqkwsa
     1381 qggksnvyfa kslderfiik qvqktelesf nefapeyfky lsdslssgsp tclakilgiy
     1441 qvsvkylkgg ketkmdlvvm enlffrrsis rtydlkgsar srynpdtlgr nkvlldmnll
     1501 etlrtepifl gskakriler aiwndtsfla siavmdysll vgvdeehkel vlgiidfmrq
     1561 ytwdkhletw vkasgilggp knasptiisp kqykkrfrka mttyfltvpd qwtl
//
LOCUS       XP_016693258            1614 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016693258
VERSION     XP_016693258.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837769.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693258.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1614
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X2"
                     /calculated_mol_wt=181687
     Region          272..544
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1342..1605
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1389,1398,1400,1460..1463,1474,1493,1540,1555..1556)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1614
                     /gene="LOC107910033"
                     /coded_by="XM_016837769.2:334..5178"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mkycdkvhps lcesseppsp cfvnpetiks dslapyleay dceftmqsvt sksitsfsth
       61 sspvsicrsa crcrsdeeda hdfgkhflsp stkycqdvsn vdshslsgrh dfyscksvgs
      121 spsvspfrnn ftpyrvgisv qkkqegspma qyvapfyqen mdalrkpnig teepdniydy
      181 sddfifqnqn eksqklldfe nngliwfppp pedendeies nfftyddedd digdsgamfs
      241 sssslssmfp arekqnegnk eplraiiqgh fralvlqlll gegikvgked nagdwldiit
      301 tiawqaakfv kpdtskggsm dpgdyvkvkc iasgnpsest lvkgvvcskn ikhkrmtsqy
      361 knprllllgg alefqkvpnq lasfstllqq endhlkmiia kikalhpnvl lveksvssya
      421 qeyllekeis lvlnvkrpll eriarcsgal vcpsidnlsi arlghcelfr vkkvseehei
      481 snqlnkkpsk tlmffegcpr rlgctvllrg rsreelkkvk hvvqyaifaa yhlsletsfl
      541 adegatlpkm kvkhsiirpe kmqsdnvilv apssfypsnf naignsfaqn daspslnpkq
      601 gglesfpnqd dqihispsfg gsilgtcndd ltpivdmdlc sleqlsrlqm ppmfpcdird
      661 fpqsemrdtm teeerhnmhe leksekiied eassgcflat dthqsilvsf ssrcvlkgtv
      721 cersrlfrik fygsfdkplg rylqddlfdq afccqscnep teahvicyth rqgnltinvr
      781 clsslklpge rdgkiwmwhr clrcvhidgv ppathrvvms daawglsfgk flelsfsnha
      841 tanrvatcgh slqrdclrfy gfgnmiaifr yspidilsvh lppsmlefsg diqqewirke
      901 aaelmvkvem lyaevldvld nieqknnssn asdlsnrime lrdqiqkern dyisllqptv
      961 ietshldlta tdilelnrlk rslliglhvw drrlnsldsh lrkgsafkge lglskdgkld
     1021 ayqqntyksa dsleppksda rleqnsslpt fesdvpkeld lalcienree neetdesihs
     1081 ptstlserid sawtstdllt lkvqspeafq gnelqtrlvk ptskidnlpl rkvasptrvh
     1141 sfdsalrlqa riqkglhpst lhlstlksfh atrdyrtmvg dpvsnvtsty sytfpfeaqk
     1201 lnlllrstpt lincashvae garlllvqrg psdiviavyd ndpasiisya liskeyeewv
     1261 ddksikiggg wsvadrskkd satssfspwq sfgsldmdyt hfgsfgsedt sssigamftn
     1321 tkrsphltvc feddsyvggg mvkfsvtcyf akqfdslrrk ccpnevdfvr slsrcqkwsa
     1381 qggksnvyfa kslderfiik qvqktelesf nefapeyfky lsdslssgsp tclakilgiy
     1441 qvsvkylkgg ketkmdlvvm enlffrrsis rtydlkgsar srynpdtlgr nkvlldmnll
     1501 etlrtepifl gskakriler aiwndtsfla siavmdysll vgvdeehkel vlgiidfmrq
     1561 ytwdkhletw vkasgilggp knasptiisp kqykkrfrka mttyfltvpd qwtl
//
LOCUS       XP_016693259            1614 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016693259
VERSION     XP_016693259.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693259.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1614
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X2"
                     /calculated_mol_wt=181687
     Region          272..544
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1342..1605
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1389,1398,1400,1460..1463,1474,1493,1540,1555..1556)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1614
                     /gene="LOC107910033"
                     /coded_by="XM_016837770.2:324..5168"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mkycdkvhps lcesseppsp cfvnpetiks dslapyleay dceftmqsvt sksitsfsth
       61 sspvsicrsa crcrsdeeda hdfgkhflsp stkycqdvsn vdshslsgrh dfyscksvgs
      121 spsvspfrnn ftpyrvgisv qkkqegspma qyvapfyqen mdalrkpnig teepdniydy
      181 sddfifqnqn eksqklldfe nngliwfppp pedendeies nfftyddedd digdsgamfs
      241 sssslssmfp arekqnegnk eplraiiqgh fralvlqlll gegikvgked nagdwldiit
      301 tiawqaakfv kpdtskggsm dpgdyvkvkc iasgnpsest lvkgvvcskn ikhkrmtsqy
      361 knprllllgg alefqkvpnq lasfstllqq endhlkmiia kikalhpnvl lveksvssya
      421 qeyllekeis lvlnvkrpll eriarcsgal vcpsidnlsi arlghcelfr vkkvseehei
      481 snqlnkkpsk tlmffegcpr rlgctvllrg rsreelkkvk hvvqyaifaa yhlsletsfl
      541 adegatlpkm kvkhsiirpe kmqsdnvilv apssfypsnf naignsfaqn daspslnpkq
      601 gglesfpnqd dqihispsfg gsilgtcndd ltpivdmdlc sleqlsrlqm ppmfpcdird
      661 fpqsemrdtm teeerhnmhe leksekiied eassgcflat dthqsilvsf ssrcvlkgtv
      721 cersrlfrik fygsfdkplg rylqddlfdq afccqscnep teahvicyth rqgnltinvr
      781 clsslklpge rdgkiwmwhr clrcvhidgv ppathrvvms daawglsfgk flelsfsnha
      841 tanrvatcgh slqrdclrfy gfgnmiaifr yspidilsvh lppsmlefsg diqqewirke
      901 aaelmvkvem lyaevldvld nieqknnssn asdlsnrime lrdqiqkern dyisllqptv
      961 ietshldlta tdilelnrlk rslliglhvw drrlnsldsh lrkgsafkge lglskdgkld
     1021 ayqqntyksa dsleppksda rleqnsslpt fesdvpkeld lalcienree neetdesihs
     1081 ptstlserid sawtstdllt lkvqspeafq gnelqtrlvk ptskidnlpl rkvasptrvh
     1141 sfdsalrlqa riqkglhpst lhlstlksfh atrdyrtmvg dpvsnvtsty sytfpfeaqk
     1201 lnlllrstpt lincashvae garlllvqrg psdiviavyd ndpasiisya liskeyeewv
     1261 ddksikiggg wsvadrskkd satssfspwq sfgsldmdyt hfgsfgsedt sssigamftn
     1321 tkrsphltvc feddsyvggg mvkfsvtcyf akqfdslrrk ccpnevdfvr slsrcqkwsa
     1381 qggksnvyfa kslderfiik qvqktelesf nefapeyfky lsdslssgsp tclakilgiy
     1441 qvsvkylkgg ketkmdlvvm enlffrrsis rtydlkgsar srynpdtlgr nkvlldmnll
     1501 etlrtepifl gskakriler aiwndtsfla siavmdysll vgvdeehkel vlgiidfmrq
     1561 ytwdkhletw vkasgilggp knasptiisp kqykkrfrka mttyfltvpd qwtl
//
LOCUS       XP_016693255            1636 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_016693255
VERSION     XP_016693255.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837766.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693255.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1636
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X1"
                     /calculated_mol_wt=184224
     Region          294..566
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1364..1627
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1411,1420,1422,1482..1485,1496,1515,1562,1577..1578)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1636
                     /gene="LOC107910033"
                     /coded_by="XM_016837766.2:396..5306"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mmstkfckfc cdgvnvrres rgmkycdkvh pslcessepp spcfvnpeti ksdslapyle
       61 aydceftmqs vtsksitsfs thsspvsicr sacrcrsdee dahdfgkhfl spstkycqdv
      121 snvdshslsg rhdfyscksv gsspsvspfr nnftpyrvgi svqkkqegsp maqyvapfyq
      181 enmdalrkpn igteepdniy dysddfifqn qneksqklld fenngliwfp pppedendei
      241 esnfftydde dddigdsgam fssssslssm fparekqneg nkeplraiiq ghfralvlql
      301 llgegikvgk ednagdwldi ittiawqaak fvkpdtskgg smdpgdyvkv kciasgnpse
      361 stlvkgvvcs knikhkrmts qyknprllll ggalefqkvp nqlasfstll qqendhlkmi
      421 iakikalhpn vllveksvss yaqeylleke islvlnvkrp lleriarcsg alvcpsidnl
      481 siarlghcel frvkkvseeh eisnqlnkkp sktlmffegc prrlgctvll rgrsreelkk
      541 vkhvvqyaif aayhlslets fladegatlp kmkvkhsiir pekmqsdnvi lvapssfyps
      601 nfnaignsfa qndaspslnp kqgglesfpn qddqihisps fggsilgtcn ddltpivdmd
      661 lcsleqlsrl qmppmfpcdi rdfpqsemrd tmteeerhnm heleksekii edeassgcfl
      721 atdthqsilv sfssrcvlkg tvcersrlfr ikfygsfdkp lgrylqddlf dqafccqscn
      781 epteahvicy thrqgnltin vrclsslklp gerdgkiwmw hrclrcvhid gvppathrvv
      841 msdaawglsf gkflelsfsn hatanrvatc ghslqrdclr fygfgnmiai fryspidils
      901 vhlppsmlef sgdiqqewir keaaelmvkv emlyaevldv ldnieqknns snasdlsnri
      961 melrdqiqke rndyisllqp tvietshldl tatdilelnr lkrslliglh vwdrrlnsld
     1021 shlrkgsafk gelglskdgk ldayqqntyk sadsleppks darleqnssl ptfesdvpke
     1081 ldlalcienr eeneetdesi hsptstlser idsawtstdl ltlkvqspea fqgnelqtrl
     1141 vkptskidnl plrkvasptr vhsfdsalrl qariqkglhp stlhlstlks fhatrdyrtm
     1201 vgdpvsnvts tysytfpfea qklnlllrst ptlincashv aegarlllvq rgpsdiviav
     1261 ydndpasiis yaliskeyee wvddksikig ggwsvadrsk kdsatssfsp wqsfgsldmd
     1321 ythfgsfgse dtsssigamf tntkrsphlt vcfeddsyvg ggmvkfsvtc yfakqfdslr
     1381 rkccpnevdf vrslsrcqkw saqggksnvy fakslderfi ikqvqktele sfnefapeyf
     1441 kylsdslssg sptclakilg iyqvsvkylk ggketkmdlv vmenlffrrs isrtydlkgs
     1501 arsrynpdtl grnkvlldmn lletlrtepi flgskakril eraiwndtsf lasiavmdys
     1561 llvgvdeehk elvlgiidfm rqytwdkhle twvkasgilg gpknasptii spkqykkrfr
     1621 kamttyfltv pdqwtl
//
LOCUS       XP_040944750            1481 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X3 [Gossypium hirsutum].
ACCESSION   XP_040944750
VERSION     XP_040944750.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088816.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1481
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X3"
                     /calculated_mol_wt=167068
     Region          139..411
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1209..1472
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1256,1265,1267,1327..1330,1341,1360,1407,1422..1423)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1481
                     /gene="LOC107910033"
                     /coded_by="XM_041088816.1:609..5054"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mkkmlmilkk qegspmaqyv apfyqenmda lrkpnigtee pdniydysdd fifqnqneks
       61 qklldfenng liwfpppped endeiesnff tyddedddig dsgamfssss slssmfpare
      121 kqnegnkepl raiiqghfra lvlqlllgeg ikvgkednag dwldiittia wqaakfvkpd
      181 tskggsmdpg dyvkvkcias gnpsestlvk gvvcsknikh krmtsqyknp rllllggale
      241 fqkvpnqlas fstllqqend hlkmiiakik alhpnvllve ksvssyaqey llekeislvl
      301 nvkrplleri arcsgalvcp sidnlsiarl ghcelfrvkk vseeheisnq lnkkpsktlm
      361 ffegcprrlg ctvllrgrsr eelkkvkhvv qyaifaayhl sletsflade gatlpkmkvk
      421 hsiirpekmq sdnvilvaps sfypsnfnai gnsfaqndas pslnpkqggl esfpnqddqi
      481 hispsfggsi lgtcnddltp ivdmdlcsle qlsrlqmppm fpcdirdfpq semrdtmtee
      541 erhnmhelek sekiiedeas sgcflatdth qsilvsfssr cvlkgtvcer srlfrikfyg
      601 sfdkplgryl qddlfdqafc cqscneptea hvicythrqg nltinvrcls slklpgerdg
      661 kiwmwhrclr cvhidgvppa thrvvmsdaa wglsfgkfle lsfsnhatan rvatcghslq
      721 rdclrfygfg nmiaifrysp idilsvhlpp smlefsgdiq qewirkeaae lmvkvemlya
      781 evldvldnie qknnssnasd lsnrimelrd qiqkerndyi sllqptviet shldltatdi
      841 lelnrlkrsl liglhvwdrr lnsldshlrk gsafkgelgl skdgkldayq qntyksadsl
      901 eppksdarle qnsslptfes dvpkeldlal cienreenee tdesihspts tlseridsaw
      961 tstdlltlkv qspeafqgne lqtrlvkpts kidnlplrkv asptrvhsfd salrlqariq
     1021 kglhpstlhl stlksfhatr dyrtmvgdpv snvtstysyt fpfeaqklnl llrstptlin
     1081 cashvaegar lllvqrgpsd iviavydndp asiisyalis keyeewvddk sikigggwsv
     1141 adrskkdsat ssfspwqsfg sldmdythfg sfgsedtsss igamftntkr sphltvcfed
     1201 dsyvgggmvk fsvtcyfakq fdslrrkccp nevdfvrsls rcqkwsaqgg ksnvyfaksl
     1261 derfiikqvq ktelesfnef apeyfkylsd slssgsptcl akilgiyqvs vkylkggket
     1321 kmdlvvmenl ffrrsisrty dlkgsarsry npdtlgrnkv lldmnlletl rtepiflgsk
     1381 akrileraiw ndtsflasia vmdysllvgv deehkelvlg iidfmrqytw dkhletwvka
     1441 sgilggpkna sptiispkqy kkrfrkamtt yfltvpdqwt l
//
LOCUS       XP_040944751            1480 aa            linear   PLN 06-AUG-2024
DEFINITION  putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform
            X4 [Gossypium hirsutum].
ACCESSION   XP_040944751
VERSION     XP_040944751.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088817.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1480
                     /product="putative 1-phosphatidylinositol-3-phosphate
                     5-kinase FAB1C isoform X4"
                     /calculated_mol_wt=166940
     Region          138..410
                     /region_name="Fab1_TCP"
                     /note="TCP-1 like domain of the eukaryotic
                     phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1.
                     Fab1p is important for vacuole size regulation, presumably
                     by modulating PtdIns(3,5)P2 effector activity. In the
                     human homolog p235/PIKfyve deletion of this...; cd03334"
                     /db_xref="CDD:239450"
     Region          1208..1471
                     /region_name="PIPKc_PIKfyve"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in
                     1-phosphatidylinositol-3-phosphate 5-kinase and similar
                     proteins; cd17300"
                     /db_xref="CDD:340437"
     Site            order(1255,1264,1266,1326..1329,1340,1359,1406,1421..1422)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340437"
     CDS             1..1480
                     /gene="LOC107910033"
                     /coded_by="XM_041088817.1:609..5051"
                     /db_xref="GeneID:107910033"
ORIGIN      
        1 mkkmlmilkq egspmaqyva pfyqenmdal rkpnigteep dniydysddf ifqnqneksq
       61 klldfenngl iwfppppede ndeiesnfft yddedddigd sgamfsssss lssmfparek
      121 qnegnkeplr aiiqghfral vlqlllgegi kvgkednagd wldiittiaw qaakfvkpdt
      181 skggsmdpgd yvkvkciasg npsestlvkg vvcsknikhk rmtsqyknpr llllggalef
      241 qkvpnqlasf stllqqendh lkmiiakika lhpnvllvek svssyaqeyl lekeislvln
      301 vkrplleria rcsgalvcps idnlsiarlg hcelfrvkkv seeheisnql nkkpsktlmf
      361 fegcprrlgc tvllrgrsre elkkvkhvvq yaifaayhls letsfladeg atlpkmkvkh
      421 siirpekmqs dnvilvapss fypsnfnaig nsfaqndasp slnpkqggle sfpnqddqih
      481 ispsfggsil gtcnddltpi vdmdlcsleq lsrlqmppmf pcdirdfpqs emrdtmteee
      541 rhnmheleks ekiiedeass gcflatdthq silvsfssrc vlkgtvcers rlfrikfygs
      601 fdkplgrylq ddlfdqafcc qscnepteah vicythrqgn ltinvrclss lklpgerdgk
      661 iwmwhrclrc vhidgvppat hrvvmsdaaw glsfgkflel sfsnhatanr vatcghslqr
      721 dclrfygfgn miaifryspi dilsvhlpps mlefsgdiqq ewirkeaael mvkvemlyae
      781 vldvldnieq knnssnasdl snrimelrdq iqkerndyis llqptviets hldltatdil
      841 elnrlkrsll iglhvwdrrl nsldshlrkg safkgelgls kdgkldayqq ntyksadsle
      901 ppksdarleq nsslptfesd vpkeldlalc ienreeneet desihsptst lseridsawt
      961 stdlltlkvq speafqgnel qtrlvkptsk idnlplrkva sptrvhsfds alrlqariqk
     1021 glhpstlhls tlksfhatrd yrtmvgdpvs nvtstysytf pfeaqklnll lrstptlinc
     1081 ashvaegarl llvqrgpsdi viavydndpa siisyalisk eyeewvddks ikigggwsva
     1141 drskkdsats sfspwqsfgs ldmdythfgs fgsedtsssi gamftntkrs phltvcfedd
     1201 syvgggmvkf svtcyfakqf dslrrkccpn evdfvrslsr cqkwsaqggk snvyfaksld
     1261 erfiikqvqk telesfnefa peyfkylsds lssgsptcla kilgiyqvsv kylkggketk
     1321 mdlvvmenlf frrsisrtyd lkgsarsryn pdtlgrnkvl ldmnlletlr tepiflgska
     1381 krileraiwn dtsflasiav mdysllvgvd eehkelvlgi idfmrqytwd khletwvkas
     1441 gilggpknas ptiispkqyk krfrkamtty fltvpdqwtl
//
LOCUS       XP_016693254             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At1g66480 [Gossypium hirsutum].
ACCESSION   XP_016693254
VERSION     XP_016693254.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837765.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="uncharacterized protein At1g66480"
                     /calculated_mol_wt=24727
     Region          1..>86
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..223
                     /gene="LOC107910032"
                     /coded_by="XM_016837765.2:152..823"
                     /db_xref="GeneID:107910032"
ORIGIN      
        1 mgnslggkkm tkvmkinget mklktpvrae qvvkdypghv lleseavkhf girakplqsh
       61 qnlepkrlyf lvelpeapke rvprrvrsgi nmsakdrles lmlsrrsvsd ltlmkpiiai
      121 peeeneeegg gpesgamrvk mrlpksqver likeslnere aaekimqlcv antgnssrae
      181 adkqpqlhwk ashgsigdgf karekrvsfm amneggsqia vts
//
LOCUS       XP_016693253             221 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription repressor MYB4 [Gossypium hirsutum].
ACCESSION   XP_016693253
VERSION     XP_016693253.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="transcription repressor MYB4"
                     /calculated_mol_wt=24988
     Region          2..>126
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..221
                     /gene="LOC107910031"
                     /coded_by="XM_016837764.2:314..979"
                     /db_xref="GeneID:107910031"
ORIGIN      
        1 mrkpccdkqd tnkgawskqe deklinyiri hgegcwrtlp qaagllrcgk scrlrwinyl
       61 rpdlkrgnft edeedliikl hallgnrwsl iagrlpgrtd nevknywnsh lrrklinmgi
      121 dpnnhrlith nhlprphdsn sgasiispas kvpvtdnsni hppeksrgdn dqvsdaassl
      181 edhqlpdlnl dltisvsast vdkvkddrrk sqkqsniied p
//
LOCUS       XP_016693252             601 aa            linear   PLN 06-AUG-2024
DEFINITION  multicopper oxidase LPR1 [Gossypium hirsutum].
ACCESSION   XP_016693252
VERSION     XP_016693252.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837763.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..601
                     /product="multicopper oxidase LPR1"
                     /calculated_mol_wt=68314
     Region          105..601
                     /region_name="SufI"
                     /note="Multicopper oxidase with three cupredoxin domains
                     (includes cell division protein FtsP and spore coat
                     protein CotA) [Cell cycle control, cell division,
                     chromosome partitioning, Inorganic ion transport and
                     metabolism, Cell wall/membrane/envelope biogenesis;
                     COG2132"
                     /db_xref="CDD:441735"
     CDS             1..601
                     /gene="LOC107910030"
                     /coded_by="XM_016837763.2:300..2105"
                     /db_xref="GeneID:107910030"
ORIGIN      
        1 mkafpfkayl slslslthtq ysrflplfsl vsmrrillfl lllahlgelg aedrllnpsk
       61 lemfvdelpd mpkiqgfrml ntspkpkslm igmfkkkwkf hrdlpptpvf aygasrrgat
      121 vpgptiealq gidtyvtwkn flpskhilpw dptiptaipa tktgiptvvh lhggmhepan
      181 dgnanswfta gfkekgpdws krtyrynnnq qpgslwyhdh amgltrvnll agligayvir
      241 hpevegplel phgeefdrpl ivfdrsfrkd gsiymnstgn npsihpqwqp eyfgdliivn
      301 gkawpkmtvr rrkyrlrivn asnarffrlf ftnglefihv asdstylvep vvtnetllap
      361 seiadvvvdf sksktdeavl andapypyps gdpvnelngr vmkftikker evdtwrvpdk
      421 liqypspdls satqtryiam yeytsdtdep thlyingkpy eapatetpka gtseiwnvin
      481 ltednhpihi hlavftvldq telvkaeefk acmskmndai kcqiskharg kklrvaahek
      541 gwknvykmtp gyvtrilvrf syihsntsys fdptgmpgyv yhchildhed nammrplvvm
      601 k
//
LOCUS       XP_016690725             399 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-glucuronosyltransferase GlcAT14A [Gossypium hirsutum].
ACCESSION   XP_016690725
VERSION     XP_016690725.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835236.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690725.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="beta-glucuronosyltransferase GlcAT14A"
                     /calculated_mol_wt=45656
     Region          4..396
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..399
                     /gene="LOC107907939"
                     /coded_by="XM_016835236.2:616..1815"
                     /db_xref="GeneID:107907939"
ORIGIN      
        1 mgaerkwffs llsltflsvl llvlysispf spprpfpslv qlglpyppaf gyyifggkgd
       61 kdrifrllla vyhprnryvl hlgadatdge ryslvvalks vpairsfsnv dvignpdrfs
      121 ymgssyiast lhaaailmkv dpgwdwfial saldyplltq ddlshvfssv rrdlnfidhn
      181 ndlgwkedqr frpivvdpgl ylarrtkify atekrampda fkiftgspwv vlsrsflefc
      241 ifgwdnlprt llmyfnnvml seesyfhtvi cnspelkntt vnsdlrymiw dnppkmephf
      301 lnisdydqma qsgaafarmf keddpvldmv dekilkrkrn qaapgawctg rkswwsdtcs
      361 qwgdvnvlkp gpqakkfaet itnllddwns qsnqcrlsr
//
LOCUS       XP_016693249             451 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PIN-LIKES 2 [Gossypium hirsutum].
ACCESSION   XP_016693249
VERSION     XP_016693249.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837760.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..451
                     /product="protein PIN-LIKES 2"
                     /calculated_mol_wt=49671
     Region          34..441
                     /region_name="Mem_trans"
                     /note="Membrane transport protein; pfam03547"
                     /db_xref="CDD:308904"
     CDS             1..451
                     /gene="LOC107910026"
                     /coded_by="XM_016837760.2:179..1534"
                     /db_xref="GeneID:107910026"
ORIGIN      
        1 mnrylaefyk ndmksnsedl lsailpllkl lsltviglfl ahpktqiipr atfkllsklv
       61 falflpclif telgesitid siarwwfipv nvlistfvgc llgllvviic rpppeykrft
      121 ivmtafgntg nlclaivgsv chtsnspfgp hchsrgvayv sfaqwvavil vytlvyhmme
      181 pplqfyevle egteieeqrp vndisrplli eaewpgieek etehsktpfi arifnsissr
      241 ststfpdidi ngdtsgsspm sirclaeprv vrkirivaeq tpiqhilqpp tiasllaiiv
      301 gtvpqlksyv fgydaplsfi tdslqivaga mvpsvmlilg gmlaegpnds klglrttigi
      361 ivarllvlpl lgigivtlas kldllvadda myrfvlllqy ttpsaillga iaslrsyavr
      421 easallfwqh lfalfslsvy vvvyfkllpa m
//
LOCUS       XP_016693250             260 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ribose-5-phosphate isomerase 2 [Gossypium hirsutum].
ACCESSION   XP_016693250
VERSION     XP_016693250.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837761.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693250.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..260
                     /product="probable ribose-5-phosphate isomerase 2"
                     /calculated_mol_wt=27813
     Region          1..260
                     /region_name="PLN02384"
                     /note="ribose-5-phosphate isomerase"
                     /db_xref="CDD:215215"
     Site            order(54,84,87..88,97,99,126..127,193..194,202,204,208)
                     /site_type="other"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238692"
     Site            order(54,56..57,111..112,114,124..127,133,151)
                     /site_type="active"
                     /db_xref="CDD:238692"
     Site            order(100,104,132,139,169..170,172..174,177,229..230,235)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238692"
     CDS             1..260
                     /gene="LOC107910027"
                     /coded_by="XM_016837761.2:274..1056"
                     /db_xref="GeneID:107910027"
ORIGIN      
        1 mavawsekas smealslspp msppviltqd elkkiaayka vefvesgmvl glgtgstakh
       61 averigellr qgrltniigi ptskktqeqa islgiplsdl dshptidlai dgadevdphl
      121 nlvkgrggsl lrekmvegac kkfvcivdes klvkylggsg lampvevvsf cwkftanklq
      181 nlfrdsgcva klrkdckgep fvtdngnyiv dlylkkdigd lqvasdailr iagvvehgmf
      241 ldmattviva gelgitiknk
//
LOCUS       XP_040944752             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944752
VERSION     XP_040944752.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088818.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18347
     Region          1..>161
                     /region_name="PDS5"
                     /note="Sister chromatid cohesion protein PDS5; cd19953"
                     /db_xref="CDD:410996"
     Region          83..122
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:410996"
     Region          123..155
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:410996"
     CDS             1..166
                     /gene="LOC107907938"
                     /coded_by="XM_041088818.1:1083..1583"
                     /db_xref="GeneID:107907938"
ORIGIN      
        1 mldlecddlv nemfstffsv vrddnpesvl samqtimivv leeseddrdd lllvilsalg
       61 rnksgvtqaa rrlamnvieq cseklevgik hilisvmsgd nqlikseidy heviygichc
      121 alqilsgvvp yltrelladq ldtrlravrl vgsffalpga niceaf
//
LOCUS       XP_040944753             166 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944753
VERSION     XP_040944753.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088819.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..166
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18347
     Region          1..>161
                     /region_name="PDS5"
                     /note="Sister chromatid cohesion protein PDS5; cd19953"
                     /db_xref="CDD:410996"
     Region          83..122
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:410996"
     Region          123..155
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:410996"
     CDS             1..166
                     /gene="LOC107907938"
                     /coded_by="XM_041088819.1:842..1342"
                     /db_xref="GeneID:107907938"
ORIGIN      
        1 mldlecddlv nemfstffsv vrddnpesvl samqtimivv leeseddrdd lllvilsalg
       61 rnksgvtqaa rrlamnvieq cseklevgik hilisvmsgd nqlikseidy heviygichc
      121 alqilsgvvp yltrelladq ldtrlravrl vgsffalpga niceaf
//
LOCUS       XP_016693248             528 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693248
VERSION     XP_016693248.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837759.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693248.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..528
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58710
     CDS             1..528
                     /gene="LOC107910024"
                     /coded_by="XM_016837759.2:457..2043"
                     /db_xref="GeneID:107910024"
ORIGIN      
        1 mkkilfryfv fllllgfgcl fsvpvsaqng pitdhvkfvf ggvnlgpwkn eiselgeapa
       61 ptndeppstl vlaakrtnrp dilrhfkhyl ggwditnrhy wasvgftgaa gfifaalwfv
      121 sfglvlavyh ccgwrinieg kksdhsqtic lvmlilftsv aatgcillsi gqdefhdeal
      181 htlnyvvnqs dytvqilknv tqylslakti svaqvflpsd vmtdidklni dlntaadtlt
      241 ektdenavki krvfnavrla litvaavmli lallgllmsi lghqhaihif ivsgwllvav
      301 tfilygvfvi mnnaisdtcl ameewvenph aetalsnilp cvdprttnht ltqskqvits
      361 ivdvvntyiy sianidlspd dnryynqsgp tmpalcypfd sqlqdrqcgs yevsmanasl
      421 vwqnytcmvs esglcnttgr itpdrftqlv aainesyale hytppllclq ncdfvrdtfq
      481 nitsnychpl erylkmvnag lglisvgvll clflwifyan rpegrkcl
//
LOCUS       XP_016693243             515 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfhydryl oxidase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693243
VERSION     XP_016693243.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693243.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..515
                     /product="sulfhydryl oxidase 2 isoform X1"
                     /calculated_mol_wt=58081
     Region          43..162
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          310..404
                     /region_name="Evr1_Alr"
                     /note="Erv1 / Alr family; pfam04777"
                     /db_xref="CDD:461423"
     CDS             1..515
                     /gene="LOC107910022"
                     /coded_by="XM_016837754.2:267..1814"
                     /db_xref="GeneID:107910022"
ORIGIN      
        1 mslvhwilil nlwilkatsl qagsrvvlre ighnivggsd pkdyavelna tnfdavlkdt
       61 patyaiveff ahwcpacrny khhyenvakl fngpnavhpg ivlmtrvdca lkinsklcdk
      121 fsvshypmlf wgpptkfpag wssnqakskl hviddgrtae rllnwinkqi gssygledek
      181 fenehlssni sdpgqiarav ydveeatata fdiilehkmi ksetraplik flqllvahhp
      241 srrcrkgsae vlvnfddlcp ldmwssdkhd vdtsnmigvl rnfhicgkdv prgywmfcrg
      301 skndtrgfsc glwvlmhsls vriedgesqt aftsicdfih nfficqecrq hfyemcssvk
      361 spftkardfa lwlwsahnev nerlmkeeas lktgdpkfpk iiwppkqlcp schhsqgpkd
      421 kggsqinwkr devfkflisy ygntlvslyk ekgllggdgt tdiledsstn avvvpvgaal
      481 aialascafg alacywrsqq knrkyyhqlh slkni
//
LOCUS       XP_016693244             510 aa            linear   PLN 06-AUG-2024
DEFINITION  sulfhydryl oxidase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693244
VERSION     XP_016693244.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837755.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693244.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..510
                     /product="sulfhydryl oxidase 2 isoform X2"
                     /calculated_mol_wt=57453
     Region          43..162
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          310..404
                     /region_name="Evr1_Alr"
                     /note="Erv1 / Alr family; pfam04777"
                     /db_xref="CDD:461423"
     CDS             1..510
                     /gene="LOC107910022"
                     /coded_by="XM_016837755.2:266..1798"
                     /db_xref="GeneID:107910022"
ORIGIN      
        1 mslvhwilil nlwilkatsl qagsrvvlre ighnivggsd pkdyavelna tnfdavlkdt
       61 patyaiveff ahwcpacrny khhyenvakl fngpnavhpg ivlmtrvdca lkinsklcdk
      121 fsvshypmlf wgpptkfpag wssnqakskl hviddgrtae rllnwinkqi gssygledek
      181 fenehlssni sdpgqiarav ydveeatata fdiilehkmi ksetraplik flqllvahhp
      241 srrcrkgsae vlvnfddlcp ldmwssdkhd vdtsnmigvl rnfhicgkdv prgywmfcrg
      301 skndtrgfsc glwvlmhsls vriedgesqt aftsicdfih nfficqecrq hfyemcssvk
      361 spftkardfa lwlwsahnev nerlmkeeas lktgdpkfpk iiwppkqlcp schhsqgpkd
      421 kggsqinwkr devfkflisy ygntlvslyk ekgllggdgt tdiledsstn avvvpvgaal
      481 aialascafg alacywrsqq knrkprrsws
//
LOCUS       XP_016693246             285 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693246
VERSION     XP_016693246.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837757.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693246.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=32474
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..246
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..285
                     /gene="LOC107910023"
                     /coded_by="XM_016837757.2:1..858"
                     /db_xref="GeneID:107910023"
ORIGIN      
        1 mgdhfvllvd rlltestlea aigsrnrslq atapavddtk vfgssttvdl lsprkivecr
       61 icqdededsn metpcsccgs leyahrrcvq rwcnekgntt ceichqqfkp gytappplfq
      121 irhlpmnlra nwdiyrrefn dsrfiavvst drhydeysvs ttrssiyyrt vaivlmllli
      181 lrhtlpvilt gsneytfqlf tvsfvlvfed idrlpvykla lshvvqllll pivgiilpiy
      241 lmvkavsalr hrrqqqeapn slftqsdeet ehstmqaqph ivnil
//
LOCUS       XP_016693247             260 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693247
VERSION     XP_016693247.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837758.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693247.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..260
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=29605
     Region          59..105
                     /region_name="RINGv"
                     /note="The RING-variant domain is a C4HC3 zinc-finger like
                     motif found in a number of cellular and viral proteins;
                     smart00744"
                     /db_xref="CDD:128983"
     Region          110..221
                     /region_name="DUF3675"
                     /note="Protein of unknown function (DUF3675); pfam12428"
                     /db_xref="CDD:463576"
     CDS             1..260
                     /gene="LOC107910023"
                     /coded_by="XM_016837758.2:1..783"
                     /db_xref="GeneID:107910023"
ORIGIN      
        1 mgdhfvllvd rlltestlea aigsrnrslq atapavddtk vfgssttvdl lsprkivecr
       61 icqdededsn metpcsccgs leyahrrcvq rwcnekgntt ceichqqfkp gytappplfq
      121 irhlpmnlra nwdiyrrefn dsrfiavvst drhydeysvs ttrssiyyrt vaivlmllli
      181 lrhtlpvilt gsneytfqlf tllllpivgi ilpiylmvka vsalrhrrqq qeapnslftq
      241 sdeetehstm qaqphivnil
//
LOCUS       XP_016693242             280 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693242
VERSION     XP_016693242.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693242.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..280
                     /product="uncharacterized protein"
                     /calculated_mol_wt=31204
     CDS             1..280
                     /gene="LOC107910021"
                     /coded_by="XM_016837753.2:108..950"
                     /db_xref="GeneID:107910021"
ORIGIN      
        1 msgvslavap rsepdhtvap ggksehqhir yqeqqpvvgg vmgslrliel qlvafimvfs
       61 isglvplldl vfpaftsayl ialsrfafps rgsrvssggs eeifrgsrlf nlyvilgtti
      121 glllplayvl ggfaraddqa vrsatphlfl lsfqiltenv isglslfspp vralvpllyt
      181 vrrvfvildw vhdtwvnktl pynapskdia wdwfgkglsa anlmyfainl lcfliprflp
      241 raferyfret eefhqkmsed krgksntppn ksrptdrkmd
//
LOCUS       XP_040944754             416 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZY 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944754
VERSION     XP_040944754.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088820.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..416
                     /product="protein LAZY 1 isoform X1"
                     /calculated_mol_wt=46260
     CDS             1..416
                     /gene="LOC107910018"
                     /coded_by="XM_041088820.1:4..1254"
                     /db_xref="GeneID:107910018"
ORIGIN      
        1 mpsendlpqf yglnfsllmq llgwmhrkfr qnsseqlkdf aighscnclt gqsllddqqi
       61 yskpnygtkp fspsqrdhlr ksfagveaar vdeedyeeds slamselfhg flaigtlgsd
      121 pnipdpstpt faisvenite ketevtenel klindelekv lgaeakeegy ssgrnsyvst
      181 grsshvsagr sshgstitls gkpiegsdtn gngttvcplq gylfgsaiel setttvakke
      241 hrtslgelfq rtkiteenvg gkydkeekrt ekegdksavh imkkmlkkkm lnasrsstaa
      301 tegnidsasa etklhkilhm fhrkvhpess tatykhgkpq knenkenify dgghedgghm
      361 ltdddimifp qralskkmrr yksqsippqf tlncndsngn recwiktdad ylvlel
//
LOCUS       XP_040944755             398 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAZY 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944755
VERSION     XP_040944755.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088821.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..398
                     /product="protein LAZY 1 isoform X2"
                     /calculated_mol_wt=44192
     CDS             1..398
                     /gene="LOC107910018"
                     /coded_by="XM_041088821.1:142..1338"
                     /db_xref="GeneID:107910018"
ORIGIN      
        1 mkllgwmhrk frqnsseqlk dfaighscnc ltgqsllddq qiyskpnygt kpfspsqrdh
       61 lrksfagvea arvdeedyee dsslamself hgflaigtlg sdpnipdpst ptfaisveni
      121 teketevten elklindele kvlgaeakee gyssgrnsyv stgrsshvsa grsshgstit
      181 lsgkpiegsd tngngttvcp lqgylfgsai elsetttvak kehrtslgel fqrtkiteen
      241 vggkydkeek rtekegdksa vhimkkmlkk kmlnasrsst aategnidsa saetklhkil
      301 hmfhrkvhpe sstatykhgk pqknenkeni fydgghedgg hmltdddimi fpqralskkm
      361 rryksqsipp qftlncndsn gnrecwiktd adylvlel
//
LOCUS       XP_016693241             250 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693241
VERSION     XP_016693241.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837752.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693241.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..250
                     /product="uncharacterized protein"
                     /calculated_mol_wt=27329
     CDS             1..250
                     /gene="LOC107910019"
                     /coded_by="XM_016837752.2:274..1026"
                     /db_xref="GeneID:107910019"
ORIGIN      
        1 mklknkgkvy pspsssssss edhlsvlnll paailvvasv lsledrqvla ymitrslktt
       61 ttnpslispk krsskkhppp saakpshqpp dfdcdcfdcy ttywlrwdss pnrelihqvi
      121 eafedhlssg eshkpskkna rlkrraantk tvsripenpv sdlpghqvpv steeapvfad
      181 dvisteknvg eesaaavemt eeypvagdsd vevgtrpppt snhkglarkv lpdilglfns
      241 rlwglwspnv
//
LOCUS       XP_016693239             180 aa            linear   PLN 06-AUG-2024
DEFINITION  probable WRKY transcription factor 75 [Gossypium hirsutum].
ACCESSION   XP_016693239
VERSION     XP_016693239.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837750.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..180
                     /product="probable WRKY transcription factor 75"
                     /calculated_mol_wt=20421
     Region          97..154
                     /region_name="WRKY"
                     /note="DNA binding domain; smart00774"
                     /db_xref="CDD:214815"
     CDS             1..180
                     /gene="LOC107910016"
                     /coded_by="XM_016837750.2:210..752"
                     /db_xref="GeneID:107910016"
ORIGIN      
        1 menfqgffpt ssssstslsl nltssldyse fecgkdndgi lglmadievg gaknennslv
       61 gtttesevkr gktkkgenkk irkpryafqt rsqvdilddg yrwrkyghka vknskfprsy
      121 yrcthqgckv kkqvqrltkd egivettyeg mhshpiqktn dnfehilnqm qiytsfksii
//
LOCUS       XP_040944756             115 aa            linear   PLN 06-AUG-2024
DEFINITION  MACPF domain-containing protein At4g24290-like [Gossypium
            hirsutum].
ACCESSION   XP_040944756
VERSION     XP_040944756.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088822.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..115
                     /product="MACPF domain-containing protein At4g24290-like"
                     /calculated_mol_wt=12768
     Region          24..>96
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     CDS             1..115
                     /gene="LOC107908297"
                     /coded_by="XM_041088822.1:18..365"
                     /db_xref="GeneID:107908297"
ORIGIN      
        1 msellnqkss iqgkvpsgyl nsifdlsgnw lhdaadtktl afdgyfisly ylhltasplv
       61 lndrvkksvp phwdpaalsr fiqtygthii vgmaigdqdl mcqaklflyn syira
//
LOCUS       XP_016693237             353 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693237
VERSION     XP_016693237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..353
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=37858
     Region          110..212
                     /region_name="DUF1664"
                     /note="Protein of unknown function (DUF1664); pfam07889"
                     /db_xref="CDD:462304"
     CDS             1..353
                     /gene="LOC107910015"
                     /coded_by="XM_016837748.2:293..1354"
                     /db_xref="GeneID:107910015"
ORIGIN      
        1 malplgklsi lvgagivgsi lakeghmpnl sdfvsgafkf afrqlkhdds tpsgnkprnd
       61 ylmaqvnslr qelqilasng pvtivtghgs gsskyriiiv vvvvgygyvw wkgwrlpdlm
      121 fatrrslsda rdaiakqlds vyssisatrr hlssriegvd nhlneiadia attqdevsll
      181 qdkskmlnsn vhsvryvvqt leskinrieg kqdmtnegvn wlcdyaqtme qnrptdriqa
      241 atasssrpal eaptrtpsrt gslppivpvd lpapdsngth mvkrsprnav sasglkevge
      301 sssndvgngk atsedktngs ssssgfsgmm fsggngsflt rtcsatnavl qqm
//
LOCUS       XP_016693238             330 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693238
VERSION     XP_016693238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837749.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..330
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=36125
     Region          110..212
                     /region_name="DUF1664"
                     /note="Protein of unknown function (DUF1664); pfam07889"
                     /db_xref="CDD:462304"
     CDS             1..330
                     /gene="LOC107910015"
                     /coded_by="XM_016837749.2:293..1285"
                     /db_xref="GeneID:107910015"
ORIGIN      
        1 malplgklsi lvgagivgsi lakeghmpnl sdfvsgafkf afrqlkhdds tpsgnkprnd
       61 ylmaqvnslr qelqilasng pvtivtghgs gsskyriiiv vvvvgygyvw wkgwrlpdlm
      121 fatrrslsda rdaiakqlds vyssisatrr hlssriegvd nhlneiadia attqdevsll
      181 qdkskmlnsn vhsvryvvqt leskinrieg kqdmtnegvn wlcdyaqtme qnrptdriqa
      241 atasssrpal eaptrtpsrt gslppivpvd lpapdsngth mvkrsprnav sasglkevgm
      301 vlfsqeravq qmpccnrcdq vdnnlkhldf
//
LOCUS       XP_016693236             452 aa            linear   PLN 06-AUG-2024
DEFINITION  probable DNA primase large subunit [Gossypium hirsutum].
ACCESSION   XP_016693236
VERSION     XP_016693236.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837747.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..452
                     /product="probable DNA primase large subunit"
                     /calculated_mol_wt=51718
     Region          22..440
                     /region_name="PriL_PriS_Eukaryotic"
                     /note="Eukaryotic core primase: Large subunit, PriL;
                     cd07322"
                     /db_xref="CDD:143474"
     Site            order(177..178,181,185,190..195)
                     /site_type="other"
                     /note="PriL_PriS interface [polypeptide binding]"
                     /db_xref="CDD:143474"
     CDS             1..452
                     /gene="LOC107910013"
                     /coded_by="XM_016837747.2:186..1544"
                     /db_xref="GeneID:107910013"
ORIGIN      
        1 mevvqshrks ssnnvivsil plyrsapple vrledfeffa idrlrvlkgi sdglcrgkkp
       61 eemeklvldl wkanmrhpqa veevnkdiis hfvlrlvycr teelrkwfls mettlfrhrf
      121 rwgsseaqra lmsefklpyk avsnaefesl kdklgqvars mgqtlaaada ifykvpfeev
      181 pdlvagrrvf ihkghayvai nqvvslvvtq frsylskali ltnrkwtsti reqekdrltp
      241 ivealctsyl gpdysqqqef geisikdidq vaktsfplcm rhlfekvked hhlkhggrmq
      301 lglflkgvgl klddalafwk aefapkvsae rfdkeyayni rhnygregkr tdytpyscqk
      361 iisvtpgigd hhgcpyrhfs eenlraalvr mgvssraved vmdkvhnrhy qlactltfea
      421 vhgsscdagi nhpnqyfids qrvlqskngs va
//
LOCUS       XP_016690991             114 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690991
VERSION     XP_016690991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835502.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..114
                     /product="uncharacterized protein"
                     /calculated_mol_wt=12974
     CDS             1..114
                     /gene="LOC107908275"
                     /coded_by="XM_016835502.2:89..433"
                     /db_xref="GeneID:107908275"
ORIGIN      
        1 messkrkgff fkgklaksls rvtkpratta hqqcskvvpy syansnqptd sheqmsvpss
       61 mlkvsyarli rppsfydqnm yanerwgvgd envdfkatsf isivrerfkl drvd
//
LOCUS       XP_040944757             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944757
VERSION     XP_040944757.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088823.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088823.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944758             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944758
VERSION     XP_040944758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088824.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088824.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944759             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944759
VERSION     XP_040944759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088825.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088825.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944760             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944760
VERSION     XP_040944760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088826.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088826.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944761             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944761
VERSION     XP_040944761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088827.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088827.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944762             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944762
VERSION     XP_040944762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088828.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088828.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944763             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944763
VERSION     XP_040944763.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088829.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088829.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944764             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944764
VERSION     XP_040944764.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088830.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088830.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944765             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944765
VERSION     XP_040944765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088831.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088831.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944766             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944766
VERSION     XP_040944766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088832.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088832.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944767             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944767
VERSION     XP_040944767.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088833.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088833.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944768             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944768
VERSION     XP_040944768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088834.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088834.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944769             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944769
VERSION     XP_040944769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088835.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088835.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944770             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944770
VERSION     XP_040944770.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088836.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088836.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944771             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944771
VERSION     XP_040944771.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088837.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088837.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944772             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944772
VERSION     XP_040944772.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088838.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088838.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944773             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944773
VERSION     XP_040944773.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088839.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088839.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944774             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944774
VERSION     XP_040944774.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088840.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088840.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944775             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944775
VERSION     XP_040944775.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088841.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088841.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944776             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944776
VERSION     XP_040944776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088842.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088842.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_040944777             135 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944777
VERSION     XP_040944777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088843.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14937
     CDS             1..135
                     /gene="LOC107909852"
                     /coded_by="XM_041088843.1:311..718"
                     /db_xref="GeneID:107909852"
ORIGIN      
        1 mmrrqqrnqg qqsrffyell alvlnllrlp tmplpfsdqp aapersplpr talmttvppa
       61 gfawlmlgis vslmlcgsvt ffigfmlmpw vlglvmvcyv agivstvfml gssilcyama
      121 ppsrrkdipg csyer
//
LOCUS       XP_016693028              69 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693028
VERSION     XP_016693028.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837539.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..69
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7308
     Region          2..67
                     /region_name="DUF3339"
                     /note="Protein of unknown function (DUF3339); pfam11820"
                     /db_xref="CDD:463361"
     CDS             1..69
                     /gene="LOC107909851"
                     /coded_by="XM_016837539.2:1..210"
                     /db_xref="GeneID:107909851"
ORIGIN      
        1 madwgpvvia vvlfvllspg llfqlpgrnk vvefgnmqts gisilvhaii ffglitifli
       61 aigvhiytg
//
LOCUS       XP_016693029             203 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693029
VERSION     XP_016693029.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837540.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..203
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22419
     CDS             1..203
                     /gene="LOC107909854"
                     /coded_by="XM_016837540.2:217..828"
                     /db_xref="GeneID:107909854"
ORIGIN      
        1 mestqdieli nqaiqklleg ttvkaisend ndhllsrlfs qleslkennt lkqyeveeln
       61 fpraeddkae aksengsgcg gmgveelvke lkaikkqnti thgllsvmiv vtlfwqvsea
      121 slllqvkngl thpfksvgsw lvtllkgrak ptqqhynhlv dasasppslq lpefphlgss
      181 gkdtewepsk vlpiivfvys vqk
//
LOCUS       XP_016693030             122 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2B isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693030
VERSION     XP_016693030.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837541.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..122
                     /product="nuclear transport factor 2B isoform X1"
                     /calculated_mol_wt=13326
     Region          2..121
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     Site            order(30,36,43,68,70..71,80,103,114..116,118,120)
                     /site_type="active"
                     /note="TAP/p15 interaction [active]"
                     /db_xref="CDD:238403"
     Site            order(34,36..37,65..66,68,70..71,78,82..84,89,91..94,97,
                     103,114..116,118..121)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238403"
     Site            order(37..38,55,60,83,85,87,89,91,94,117,119,121)
                     /site_type="active"
                     /note="RanGDP-NTF2 interaction [active]"
                     /db_xref="CDD:238403"
     CDS             1..122
                     /gene="LOC107909855"
                     /coded_by="XM_016837541.2:321..689"
                     /db_xref="GeneID:107909855"
ORIGIN      
        1 mdpdavakaf vehyystfda nraglanlyq egsmltfegq kiqgsqsiva kltslpfqqc
       61 khnittvdcq psgsggmlvf vsgnlqlage qhalkfsqmf hlmptpqgsf yvlndifrln
      121 ya
//
LOCUS       XP_016693031             105 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2A isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693031
VERSION     XP_016693031.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837542.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="nuclear transport factor 2A isoform X2"
                     /calculated_mol_wt=11231
     Region          2..98
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     CDS             1..105
                     /gene="LOC107909855"
                     /coded_by="XM_016837542.2:312..629"
                     /db_xref="GeneID:107909855"
ORIGIN      
        1 mdpdavakaf vehyystfda nraglanlyq egsmltfegq kiqgsqsiva kltslpfqqc
       61 khnittvdcq psgsggmlvf vsgnlqlage qhalkfsqrs sqcsl
//
LOCUS       XP_040944778              98 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear transport factor 2A isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944778
VERSION     XP_040944778.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088844.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..98
                     /product="nuclear transport factor 2A isoform X3"
                     /calculated_mol_wt=10469
     Region          2..98
                     /region_name="NTF2"
                     /note="Nuclear transport factor 2 (NTF2) domain plays an
                     important role in the trafficking of macromolecules, ions
                     and small molecules between the cytoplasm and nucleus.
                     This bi-directional transport of macromolecules across the
                     nuclear envelope requires many...; cd00780"
                     /db_xref="CDD:238403"
     CDS             1..98
                     /gene="LOC107909855"
                     /coded_by="XM_041088844.1:312..608"
                     /db_xref="GeneID:107909855"
ORIGIN      
        1 mdpdavakaf vehyystfda nraglanlyq egsmltfegq kiqgsqsiva kltslpfqqc
       61 khnittvdcq psgsggmlvf vsgnlqlage qhalkfsq
//
LOCUS       XP_016693032            1025 aa            linear   PLN 06-AUG-2024
DEFINITION  histidine kinase 3 [Gossypium hirsutum].
ACCESSION   XP_016693032
VERSION     XP_016693032.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837543.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1025
                     /product="histidine kinase 3"
                     /calculated_mol_wt=114572
     Region          159..356
                     /region_name="CHASE"
                     /note="CHASE domain; pfam03924"
                     /db_xref="CDD:427591"
     Region          <435..1023
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
     CDS             1..1025
                     /gene="LOC107909856"
                     /coded_by="XM_016837543.2:1149..4226"
                     /db_xref="GeneID:107909856"
ORIGIN      
        1 msllhvfgfg lkvghlvwml ccwiasmilm nwsingefkd pkagllgdsg skmwfkcwde
       61 iskysfkihh qyyqyigskr vgkswsrkll fswvigwtla siwifccmss qatekrkeml
      121 asmcderarm lqdqfnvsmn hiqalsilis tfhhgkypsa idqrtfaryt ertaferplt
      181 sgvayavrvl hsereqferq qgwtikrmdt leqnpvhkdd yhpdflepsp iqeeyapvif
      241 aqdsvshvvs idvlsgkedr envlqarksg kgvltapfrl lktnrlgvil tfavykrdlp
      301 snaahneriq atdgylggvf dieslvekll hqlaskqtil vnvldttnqs ypismygsna
      361 sndglehvsh lnfgdpfrkh emrcrfkqkp pwpwlaitts igilviallv ghifhatvnr
      421 iakveddclk mmelkkqaea advaksqfla tvsheirtpm ngvlgmldml mdtdldvtql
      481 dyvrtaqasg kalvalinev ldqakiesgk leleevqfdl railddvlsl fsgksqdkgv
      541 elavyisdrv pdmligdpgr frqiitnlmg nsikftekgh ilvtvhlvee vidsievete
      601 ssskntlsgf pvadrrqswk gfrtfsqegs mhpfsdsinl ivsvedtgvg ippeaqsrvf
      661 tpfmqvgpsi srthggtgig lsiskclvgl mkgeigfvsi pkigstftft avftsgcsss
      721 keyksqqinc qsntvssefh gmralvmdpr pvrakvskyh iqrlgihvev vsdwkqglss
      781 isrannaihm vlieqevwdr dlkssglfme kigpgsppkv fllsnsinfs rgnttpgayg
      841 ltviskplra smlaaslqra mgignkgnpc ngelpslslr nlllgrkili iddnnvnlkv
      901 aggalkkyga dvvsatrgik aielltpphh fdacfmdiqm pemdgfeatr rirdveqnin
      961 nhikfgeisv ddynnvsnwh vpilamtadv iqatheeclr cgmdgyvskp feaeqlyrev
     1021 srffh
//
LOCUS       XP_016693033             809 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693033
VERSION     XP_016693033.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837544.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..809
                     /product="uncharacterized protein"
                     /calculated_mol_wt=89526
     Region          66..127
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(94..96,104,107..108,111..112)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          515..723
                     /region_name="DUF3444"
                     /note="Domain of unknown function (DUF3444); pfam11926"
                     /db_xref="CDD:463398"
     CDS             1..809
                     /gene="LOC107909858"
                     /coded_by="XM_016837544.2:442..2871"
                     /db_xref="GeneID:107909858"
ORIGIN      
        1 mecnkdeatr akelaekkfi akdingakkf alkaqnlypg ldgipqmiat lnvyisaenk
       61 ingeadwyav lgvnpladde svrkqyrkla lmlhpdknks igaegafkli seawsllsdk
      121 grraaydkrr yakvtqtvpt psgsskaska angfynaakt stsnvktsks snphaaqsst
      181 psgrssntaa gqssnpasfh kpkpntfwti chrckmhyey lrvylnhnll cpnchepfla
      241 vetappttst ptpwkfsqqr hnsngqagnk ssnnigrnhs ssysaagfas hdsysqsnfq
      301 wgpfsrtggt staaqaasvv qqayekvrre reeaqaatkr eeamrkkhhg skrasgasss
      361 gytnaakrrr gmedgsasvh gtsitnqmgv gnggaanlsg sklgsleagw ingankhnna
      421 rdisqiemqs llvekakrei qkklnewnsa aaakttskdi kgnenasekq nksfvnndaq
      481 dqkkseglvd eingdhlvkp fpvssgvgfd aetleamsid vpdpdfhdfd kdrtersfed
      541 nqvwaayddd dgmprcyami hnvisrdplk mriswlnskt nselgpldwv gsgfsktcge
      601 frigrheins slnsfshkvr wtkgmrgtir iyprkgdvwa iyrhwspdwn eltanevihk
      661 ydmveilddy neelgvtvtp lvkvagfktv fhrhldhkei rripreemfr fshqvpsyll
      721 tgqeasnapk gcreldpaat pvellqvimd vkdeeilekg kviteenvvd vekandggvv
      781 enrdkmkkee dsgfkaledv evlvnvgnt
//
LOCUS       XP_040944779             809 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944779
VERSION     XP_040944779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088845.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..809
                     /product="uncharacterized protein"
                     /calculated_mol_wt=89526
     Region          66..127
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(94..96,104,107..108,111..112)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          515..723
                     /region_name="DUF3444"
                     /note="Domain of unknown function (DUF3444); pfam11926"
                     /db_xref="CDD:463398"
     CDS             1..809
                     /gene="LOC107909858"
                     /coded_by="XM_041088845.1:723..3152"
                     /db_xref="GeneID:107909858"
ORIGIN      
        1 mecnkdeatr akelaekkfi akdingakkf alkaqnlypg ldgipqmiat lnvyisaenk
       61 ingeadwyav lgvnpladde svrkqyrkla lmlhpdknks igaegafkli seawsllsdk
      121 grraaydkrr yakvtqtvpt psgsskaska angfynaakt stsnvktsks snphaaqsst
      181 psgrssntaa gqssnpasfh kpkpntfwti chrckmhyey lrvylnhnll cpnchepfla
      241 vetappttst ptpwkfsqqr hnsngqagnk ssnnigrnhs ssysaagfas hdsysqsnfq
      301 wgpfsrtggt staaqaasvv qqayekvrre reeaqaatkr eeamrkkhhg skrasgasss
      361 gytnaakrrr gmedgsasvh gtsitnqmgv gnggaanlsg sklgsleagw ingankhnna
      421 rdisqiemqs llvekakrei qkklnewnsa aaakttskdi kgnenasekq nksfvnndaq
      481 dqkkseglvd eingdhlvkp fpvssgvgfd aetleamsid vpdpdfhdfd kdrtersfed
      541 nqvwaayddd dgmprcyami hnvisrdplk mriswlnskt nselgpldwv gsgfsktcge
      601 frigrheins slnsfshkvr wtkgmrgtir iyprkgdvwa iyrhwspdwn eltanevihk
      661 ydmveilddy neelgvtvtp lvkvagfktv fhrhldhkei rripreemfr fshqvpsyll
      721 tgqeasnapk gcreldpaat pvellqvimd vkdeeilekg kviteenvvd vekandggvv
      781 enrdkmkkee dsgfkaledv evlvnvgnt
//
LOCUS       XP_016693034             809 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693034
VERSION     XP_016693034.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837545.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..809
                     /product="uncharacterized protein"
                     /calculated_mol_wt=89526
     Region          66..127
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(94..96,104,107..108,111..112)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          515..723
                     /region_name="DUF3444"
                     /note="Domain of unknown function (DUF3444); pfam11926"
                     /db_xref="CDD:463398"
     CDS             1..809
                     /gene="LOC107909858"
                     /coded_by="XM_016837545.2:390..2819"
                     /db_xref="GeneID:107909858"
ORIGIN      
        1 mecnkdeatr akelaekkfi akdingakkf alkaqnlypg ldgipqmiat lnvyisaenk
       61 ingeadwyav lgvnpladde svrkqyrkla lmlhpdknks igaegafkli seawsllsdk
      121 grraaydkrr yakvtqtvpt psgsskaska angfynaakt stsnvktsks snphaaqsst
      181 psgrssntaa gqssnpasfh kpkpntfwti chrckmhyey lrvylnhnll cpnchepfla
      241 vetappttst ptpwkfsqqr hnsngqagnk ssnnigrnhs ssysaagfas hdsysqsnfq
      301 wgpfsrtggt staaqaasvv qqayekvrre reeaqaatkr eeamrkkhhg skrasgasss
      361 gytnaakrrr gmedgsasvh gtsitnqmgv gnggaanlsg sklgsleagw ingankhnna
      421 rdisqiemqs llvekakrei qkklnewnsa aaakttskdi kgnenasekq nksfvnndaq
      481 dqkkseglvd eingdhlvkp fpvssgvgfd aetleamsid vpdpdfhdfd kdrtersfed
      541 nqvwaayddd dgmprcyami hnvisrdplk mriswlnskt nselgpldwv gsgfsktcge
      601 frigrheins slnsfshkvr wtkgmrgtir iyprkgdvwa iyrhwspdwn eltanevihk
      661 ydmveilddy neelgvtvtp lvkvagfktv fhrhldhkei rripreemfr fshqvpsyll
      721 tgqeasnapk gcreldpaat pvellqvimd vkdeeilekg kviteenvvd vekandggvv
      781 enrdkmkkee dsgfkaledv evlvnvgnt
//
LOCUS       XP_016693035             809 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693035
VERSION     XP_016693035.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837546.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..809
                     /product="uncharacterized protein"
                     /calculated_mol_wt=89526
     Region          66..127
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(94..96,104,107..108,111..112)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          515..723
                     /region_name="DUF3444"
                     /note="Domain of unknown function (DUF3444); pfam11926"
                     /db_xref="CDD:463398"
     CDS             1..809
                     /gene="LOC107909858"
                     /coded_by="XM_016837546.2:320..2749"
                     /db_xref="GeneID:107909858"
ORIGIN      
        1 mecnkdeatr akelaekkfi akdingakkf alkaqnlypg ldgipqmiat lnvyisaenk
       61 ingeadwyav lgvnpladde svrkqyrkla lmlhpdknks igaegafkli seawsllsdk
      121 grraaydkrr yakvtqtvpt psgsskaska angfynaakt stsnvktsks snphaaqsst
      181 psgrssntaa gqssnpasfh kpkpntfwti chrckmhyey lrvylnhnll cpnchepfla
      241 vetappttst ptpwkfsqqr hnsngqagnk ssnnigrnhs ssysaagfas hdsysqsnfq
      301 wgpfsrtggt staaqaasvv qqayekvrre reeaqaatkr eeamrkkhhg skrasgasss
      361 gytnaakrrr gmedgsasvh gtsitnqmgv gnggaanlsg sklgsleagw ingankhnna
      421 rdisqiemqs llvekakrei qkklnewnsa aaakttskdi kgnenasekq nksfvnndaq
      481 dqkkseglvd eingdhlvkp fpvssgvgfd aetleamsid vpdpdfhdfd kdrtersfed
      541 nqvwaayddd dgmprcyami hnvisrdplk mriswlnskt nselgpldwv gsgfsktcge
      601 frigrheins slnsfshkvr wtkgmrgtir iyprkgdvwa iyrhwspdwn eltanevihk
      661 ydmveilddy neelgvtvtp lvkvagfktv fhrhldhkei rripreemfr fshqvpsyll
      721 tgqeasnapk gcreldpaat pvellqvimd vkdeeilekg kviteenvvd vekandggvv
      781 enrdkmkkee dsgfkaledv evlvnvgnt
//
LOCUS       XP_016693036              68 aa            linear   PLN 06-AUG-2024
DEFINITION  stress-associated endoplasmic reticulum protein 2 [Gossypium
            hirsutum].
ACCESSION   XP_016693036
VERSION     XP_016693036.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837547.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..68
                     /product="stress-associated endoplasmic reticulum protein
                     2"
                     /calculated_mol_wt=7345
     Region          4..59
                     /region_name="RAMP4"
                     /note="Ribosome associated membrane protein RAMP4;
                     pfam06624"
                     /db_xref="CDD:461965"
     CDS             1..68
                     /gene="LOC107909860"
                     /coded_by="XM_016837547.2:241..447"
                     /db_xref="GeneID:107909860"
ORIGIN      
        1 mttsrrlaer kvekfqknit krgavpettt kkgkdypvgp vllgffifvv igsslfqiir
       61 tatsggma
//
LOCUS       XP_016690994             555 aa            linear   PLN 06-AUG-2024
DEFINITION  4-coumarate--CoA ligase-like 1 [Gossypium hirsutum].
ACCESSION   XP_016690994
VERSION     XP_016690994.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835505.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..555
                     /product="4-coumarate--CoA ligase-like 1"
                     /calculated_mol_wt=60982
     Region          5..550
                     /region_name="PLN02330"
                     /note="4-coumarate--CoA ligase-like 1"
                     /db_xref="CDD:215189"
     Site            order(194,197..202,204..205)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341230"
     Site            order(239,244..245,249,289..290,293,314,316..319,339..344,
                     348..349,428,440,443,445,449,451..454,509,515)
                     /site_type="active"
                     /db_xref="CDD:341230"
     Site            order(239,289..290,293,316,451..453,509,515)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341230"
     Site            order(243,317..319,340..344,428,440,443,445,447,449,454)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341230"
     CDS             1..555
                     /gene="LOC107908281"
                     /coded_by="XM_016835505.2:18..1685"
                     /db_xref="GeneID:107908281"
ORIGIN      
        1 menptqvqhs ededehifrs kyppvsvpdn ltlpefvlqd aelyadkvaf veavsgksyt
       61 yrdvvrdtrr fakalrslgl rkghvvlvll pniaeygiva lgimaaggvf sganpashps
      121 eikkqayaan aklivtngpn yekvknleqp vvvigeehie datnwdelle agdragtgtr
      181 ftkeevlqsd lcalpfssgt tgiskgvmlt hrnlvanlcs slfsvgsemi gevttlglip
      241 ffhiygitgi ccatlrnkgk vvvmnrfdlr tflnalitqe vtfapivppi ilalvknpiv
      301 eefdlsklkl raimtaaapl apellasfen kfpgvqvqea ygltehscit lthgnpmkgh
      361 dtakknsvgf ilpnleikfi dpdtsrslpk ntpgelcvrs qcvmqgyykn keetnrtidk
      421 ngwlhtgdia yidddgdifi vdrikeliky kgfqvapael eaillthssv edaavvplpd
      481 eesgeipaac vvmnpnaken erdimeyvas nvahykkvrv lqfvgtipks psgkimrrll
      541 kdkmmenmpk ppsys
//
LOCUS       XP_016693042             286 aa            linear   PLN 06-AUG-2024
DEFINITION  ranBP2-type zinc finger protein At1g67325 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016693042
VERSION     XP_016693042.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837553.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..286
                     /product="ranBP2-type zinc finger protein At1g67325
                     isoform X1"
                     /calculated_mol_wt=30976
     Region          22..52
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          26..47
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          194..225
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          198..219
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          240..270
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          244..265
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     CDS             1..286
                     /gene="LOC107909865"
                     /coded_by="XM_016837553.2:160..1020"
                     /db_xref="GeneID:107909865"
ORIGIN      
        1 msqvdnrnss aakrartdgs rreddwtcps cgnvnfsfrt tcnmrnctqp rpavhnsksa
       61 skplqapqsy lssapyvgsg apssmylgvp pygsslfngs sippyeapfs ggsayhynyg
      121 srlsggspfr llhmpsgppp yssgpmigng iggiygvppl mdryglglpm apppmgprpg
      181 ffpddklqkk datrdddwtc pkcgninfsf rtvcnmrkcn tpkpgsqtpk sdksskqkmp
      241 egswkcekcs ninypfrtkc nrqncgtekp aeskkspspt vnendq
//
LOCUS       XP_016693043             284 aa            linear   PLN 06-AUG-2024
DEFINITION  ranBP2-type zinc finger protein At1g67325 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016693043
VERSION     XP_016693043.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837554.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..284
                     /product="ranBP2-type zinc finger protein At1g67325
                     isoform X2"
                     /calculated_mol_wt=30806
     Region          22..52
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          26..47
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          192..223
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          196..217
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          238..268
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          242..263
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     CDS             1..284
                     /gene="LOC107909865"
                     /coded_by="XM_016837554.2:160..1014"
                     /db_xref="GeneID:107909865"
ORIGIN      
        1 msqvdnrnss aakrartdgs rreddwtcps cgnvnfsfrt tcnmrnctqp rpavhnsksa
       61 skplqapqsy lssapyvgsg apssmylgvp pygsslfngs sippyeapfs ggsayhynyg
      121 srlsggspfr llhmpsgppp yssgpmigng giygvpplmd ryglglpmap ppmgprpgff
      181 pddklqkkda trdddwtcpk cgninfsfrt vcnmrkcntp kpgsqtpksd ksskqkmpeg
      241 swkcekcsni nypfrtkcnr qncgtekpae skkspsptvn endq
//
LOCUS       XP_016693018             289 aa            linear   PLN 06-AUG-2024
DEFINITION  probable methyltransferase At1g27930 [Gossypium hirsutum].
ACCESSION   XP_016693018
VERSION     XP_016693018.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837529.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="probable methyltransferase At1g27930"
                     /calculated_mol_wt=32716
     Region          69..275
                     /region_name="Polysacc_synt_4"
                     /note="Polysaccharide biosynthesis; cl04661"
                     /db_xref="CDD:383809"
     CDS             1..289
                     /gene="LOC107909846"
                     /coded_by="XM_016837529.2:1089..1958"
                     /db_xref="GeneID:107909846"
ORIGIN      
        1 mkreettknr hfladkrwfm pitiagfiag tilissfikt adysilcsla ktrsiaveey
       61 ssspvqlqai ihyatssivp qqnfkeisvt fdvlkkrspc nflvfglgyd slmwtslnpn
      121 gntifleedp kwvqsvlkda pilqahavky rtelkeaddl lihyrsepsc ypskaylrgn
      181 ekcrlaltgf pdefydtewd limidaprgy fpeapgrmaa ifsaavmarn rkgsgvthvf
      241 lhdvnrrvek vfaeeflcrk ylvksegrlw hfeippasns ssddsagfc
//
LOCUS       XP_016693016             363 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693016
VERSION     XP_016693016.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837527.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..363
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=40783
     Region          183..>353
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..363
                     /gene="LOC107909845"
                     /coded_by="XM_016837527.2:374..1465"
                     /db_xref="GeneID:107909845"
ORIGIN      
        1 mernleeslv lhevskdmae sefdpsills mpnspsqngr pssmvikkaq svipahlvae
       61 aistlqgldl rwsgpitpte mqyveqyvfa kypqycnglv edglkmidvd slsnsdesfe
      121 tvvtdnkqks privgnresf sssstsgmad idntqleasr lldiltrkts flgnfvsipe
      181 iqaqnralkh cglsedeylv lfmpnykdam mligesypff kgnyyltiia eesdyirefa
      241 sqreskvisa petwldlrik gsqlsqnfrr kckhspkglf aypadvngtt rlsmhwisea
      301 hrnswhvlld attlvfsegq rlplalhrpd fvlctvdnth ahpskitcll vrkrsfdtts
      361 ssp
//
LOCUS       XP_016693017             333 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693017
VERSION     XP_016693017.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837528.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=37353
     Region          153..>323
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..333
                     /gene="LOC107909845"
                     /coded_by="XM_016837528.2:52..1053"
                     /db_xref="GeneID:107909845"
ORIGIN      
        1 mpnspsqngr pssmvikkaq svipahlvae aistlqgldl rwsgpitpte mqyveqyvfa
       61 kypqycnglv edglkmidvd slsnsdesfe tvvtdnkqks privgnresf sssstsgmad
      121 idntqleasr lldiltrkts flgnfvsipe iqaqnralkh cglsedeylv lfmpnykdam
      181 mligesypff kgnyyltiia eesdyirefa sqreskvisa petwldlrik gsqlsqnfrr
      241 kckhspkglf aypadvngtt rlsmhwisea hrnswhvlld attlvfsegq rlplalhrpd
      301 fvlctvdnth ahpskitcll vrkrsfdtts ssp
//
LOCUS       XP_016693015             380 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein At1g67340 [Gossypium hirsutum].
ACCESSION   XP_016693015
VERSION     XP_016693015.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837526.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693015.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..380
                     /product="F-box protein At1g67340"
                     /calculated_mol_wt=41227
     Region          <106..229
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          112..136
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          143..172
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          182..211
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          312..356
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..380
                     /gene="LOC107909844"
                     /coded_by="XM_016837526.2:967..2109"
                     /db_xref="GeneID:107909844"
ORIGIN      
        1 mrtrrglcyp radvcvdkiv vkrrdfagyn macrkrqrfs pviagnsdlf dalpddlvis
       61 ilsklsssas cpsdfinvli tckrlnsfal qplvlskass klfaikaenw sesahrflkc
      121 cadagnveac ytlgmirfyc lqnrgsgasl makaaissha palyslaviq fngsggsknd
      181 kdlragvalc araaflghid alrelghclq dgygvrqnit egrrflvqan arelaaglss
      241 asvsniatcs wltwsphpip hptnrhpnvp gcpllsdfgc nvpapeahpa nkfltdwfgs
      301 rdgipgpglr lcshvgcgrp etrrhefrrc svcgavnycs racqaldwkl rhkaecapve
      361 rwldeegvgg dgmdeviaes
//
LOCUS       XP_016693013              94 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693013
VERSION     XP_016693013.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837524.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..94
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11363
     Region          1..86
                     /region_name="NDUFB11"
                     /note="NADH-ubiquinone oxidoreductase 11 kDa subunit;
                     pfam17250"
                     /db_xref="CDD:435812"
     CDS             1..94
                     /gene="LOC107909843"
                     /coded_by="XM_016837524.2:221..505"
                     /db_xref="GeneID:107909843"
ORIGIN      
        1 mgfimefaen lvlrlmedpk erdrkfrehv ysmkdrcakt kemwsyplrp ygfwtferhn
       61 aqlrwdpqis qvpgrrdpyd dllqdsyass skrn
//
LOCUS       XP_016693014              94 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016693014
VERSION     XP_016693014.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837525.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..94
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11363
     Region          1..86
                     /region_name="NDUFB11"
                     /note="NADH-ubiquinone oxidoreductase 11 kDa subunit;
                     pfam17250"
                     /db_xref="CDD:435812"
     CDS             1..94
                     /gene="LOC107909843"
                     /coded_by="XM_016837525.2:221..505"
                     /db_xref="GeneID:107909843"
ORIGIN      
        1 mgfimefaen lvlrlmedpk erdrkfrehv ysmkdrcakt kemwsyplrp ygfwtferhn
       61 aqlrwdpqis qvpgrrdpyd dllqdsyass skrn
//
LOCUS       XP_016693012             227 aa            linear   PLN 06-AUG-2024
DEFINITION  REF/SRPP-like protein At1g67360 [Gossypium hirsutum].
ACCESSION   XP_016693012
VERSION     XP_016693012.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837523.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="REF/SRPP-like protein At1g67360"
                     /calculated_mol_wt=24868
     Region          11..208
                     /region_name="REF"
                     /note="Rubber elongation factor protein (REF); pfam05755"
                     /db_xref="CDD:461731"
     CDS             1..227
                     /gene="LOC107909842"
                     /coded_by="XM_016837523.2:322..1005"
                     /db_xref="GeneID:107909842"
ORIGIN      
        1 matmekglef enknlglkhl nfvrvatiha lvcisnlyny skqnsgplrs tvdaveravt
       61 tavgpvygkf kdvpdhflgf ldnkvdevsh kfdehapapa kqvvnqahdl vqkaqklvee
      121 artngargal hyaaaeyknl vlvsstklwv klnrnstfns vtekvvpkaa nlcekynswl
      181 keksgkgypv vgylpsipvd afgkavkeae gkekanaddh ksesdsd
//
LOCUS       XP_040944780             618 aa            linear   PLN 06-AUG-2024
DEFINITION  meiosis-specific protein ASY1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944780
VERSION     XP_040944780.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088846.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..618
                     /product="meiosis-specific protein ASY1 isoform X1"
                     /calculated_mol_wt=70043
     Region          17..223
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..618
                     /gene="LOC107909840"
                     /coded_by="XM_041088846.1:188..2044"
                     /db_xref="GeneID:107909840"
ORIGIN      
        1 mvvaqkvkea eiteqdslll trnllriaif nisyirglfp enyfndksvp alemkikklm
       61 pldaesrrli dwmekgvyda lqkkylktll fcicesidga mieeysfsfs ysnsdiqevs
      121 mninrtgskk hgraficnst aevtpnqmrs sackmvrtlv qlmrtldkmp eertilmkll
      181 yyddvtpmdy eppffrccte eeahnswikn plrmevgnvn skhfvlalkv ksvldpcgde
      241 nddiedevsl gvdsvqrdes sdsdtevges qedqfivapv dkerseedns avdeddtqdp
      301 medeqqlarv kiwidnlhld tveltdvlsh fpdisvvlte eimdklvkeg vlsrsgkdsy
      361 tinkqkksey eftvkeetdg qvqisqkspk ledhmymkal yyalpmkyvs aaklhkkldg
      421 qvnqtvvrkl inkmtqdgfi eakgnrrlgk rvihsnltek kllelkraln kdpmqdmdct
      481 ephnktshpe mqttgsnlrd vstcgvlhsi gsdltrmrgr sdmnqseqti sktrdngntp
      541 ismaqpiasr esfvpgcenn rvngncdevd tivcsrssqd krgrkastvc gqgaypaehe
      601 apeitsclke mekcnvsa
//
LOCUS       XP_016693010             617 aa            linear   PLN 06-AUG-2024
DEFINITION  meiosis-specific protein ASY1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693010
VERSION     XP_016693010.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837521.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..617
                     /product="meiosis-specific protein ASY1 isoform X2"
                     /calculated_mol_wt=69915
     Region          17..223
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..617
                     /gene="LOC107909840"
                     /coded_by="XM_016837521.2:180..2033"
                     /db_xref="GeneID:107909840"
ORIGIN      
        1 mvvaqkvkea eiteqdslll trnllriaif nisyirglfp enyfndksvp alemkikklm
       61 pldaesrrli dwmekgvyda lqkkylktll fcicesidga mieeysfsfs ysnsdiqevs
      121 mninrtgskk hgraficnst aevtpnqmrs sackmvrtlv qlmrtldkmp eertilmkll
      181 yyddvtpmdy eppffrccte eeahnswikn plrmevgnvn skhfvlalkv ksvldpcgde
      241 nddiedevsl gvdsvqrdes sdsdtevges qedqfivapv dkerseedns avdeddtqdp
      301 medeqqlarv kiwidnlhld tveltdvlsh fpdisvvlte eimdklvkeg vlsrsgkdsy
      361 tinkqkksey eftvkeetdg qvqisqkspk ledhmymkal yyalpmkyvs aaklhkkldg
      421 qvnqtvvrkl inkmtqdgfi eakgnrrlgk rvihsnltek kllelkraln kdpmdmdcte
      481 phnktshpem qttgsnlrdv stcgvlhsig sdltrmrgrs dmnqseqtis ktrdngntpi
      541 smaqpiasre sfvpgcennr vngncdevdt ivcsrssqdk rgrkastvcg qgaypaehea
      601 peitsclkem ekcnvsa
//
LOCUS       XP_040944781             605 aa            linear   PLN 06-AUG-2024
DEFINITION  meiosis-specific protein ASY1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944781
VERSION     XP_040944781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088847.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..605
                     /product="meiosis-specific protein ASY1 isoform X3"
                     /calculated_mol_wt=68844
     Region          17..223
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..605
                     /gene="LOC107909840"
                     /coded_by="XM_041088847.1:182..1999"
                     /db_xref="GeneID:107909840"
ORIGIN      
        1 mvvaqkvkea eiteqdslll trnllriaif nisyirglfp enyfndksvp alemkikklm
       61 pldaesrrli dwmekgvyda lqkkylktll fcicesidga mieeysfsfs ysnsdiqevs
      121 mninrtgskk hgraficnst aevtpnqmrs sackmvrtlv qlmrtldkmp eertilmkll
      181 yyddvtpmdy eppffrccte eeahnswikn plrmevgnvn skhfvlalkv ksvldpcgde
      241 nddiedevsl gvdsvqrdes sdsdtevges qedqfivapv dkerseedns avdeddtqdp
      301 medeqqlarv kiwidnlhld tveltdvlsh fpdisvvlte eimdklvkeg vlsrsgkdsy
      361 tinkqkksey eftvkeetdg qvqisqkspk ledhmymkal yyalpmkyvs aaklhkkldg
      421 qvnqtvvrkl inkmtqdgfi eakgnrrlgk rvihsnltek kllelkraln kdpmqdmdct
      481 ephnktshpe mqttgsnlrd vstcgvlhsi gsdltrmrgr sdmnqseqti sktrdngntp
      541 ismaqpiasr esfvpgcenn rvngncdevd tivcsrssqd krgrkastvk epilqnmkrq
      601 ksqav
//
LOCUS       XP_016693011             604 aa            linear   PLN 06-AUG-2024
DEFINITION  meiosis-specific protein ASY1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016693011
VERSION     XP_016693011.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837522.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..604
                     /product="meiosis-specific protein ASY1 isoform X4"
                     /calculated_mol_wt=68716
     Region          17..223
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..604
                     /gene="LOC107909840"
                     /coded_by="XM_016837522.2:176..1990"
                     /db_xref="GeneID:107909840"
ORIGIN      
        1 mvvaqkvkea eiteqdslll trnllriaif nisyirglfp enyfndksvp alemkikklm
       61 pldaesrrli dwmekgvyda lqkkylktll fcicesidga mieeysfsfs ysnsdiqevs
      121 mninrtgskk hgraficnst aevtpnqmrs sackmvrtlv qlmrtldkmp eertilmkll
      181 yyddvtpmdy eppffrccte eeahnswikn plrmevgnvn skhfvlalkv ksvldpcgde
      241 nddiedevsl gvdsvqrdes sdsdtevges qedqfivapv dkerseedns avdeddtqdp
      301 medeqqlarv kiwidnlhld tveltdvlsh fpdisvvlte eimdklvkeg vlsrsgkdsy
      361 tinkqkksey eftvkeetdg qvqisqkspk ledhmymkal yyalpmkyvs aaklhkkldg
      421 qvnqtvvrkl inkmtqdgfi eakgnrrlgk rvihsnltek kllelkraln kdpmdmdcte
      481 phnktshpem qttgsnlrdv stcgvlhsig sdltrmrgrs dmnqseqtis ktrdngntpi
      541 smaqpiasre sfvpgcennr vngncdevdt ivcsrssqdk rgrkastvke pilqnmkrqk
      601 sqav
//
LOCUS       XP_040944782             201 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import receptor subunit TOM20 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944782
VERSION     XP_040944782.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088848.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..201
                     /product="mitochondrial import receptor subunit TOM20
                     isoform X1"
                     /calculated_mol_wt=21794
     Region          8..193
                     /region_name="TOM20_plant"
                     /note="Plant specific mitochondrial import receptor
                     subunit TOM20; pfam06552"
                     /db_xref="CDD:284068"
     CDS             1..201
                     /gene="LOC121214727"
                     /coded_by="XM_041088848.1:187..792"
                     /db_xref="GeneID:121214727"
ORIGIN      
        1 mefsqadfdr llvaehtrkt sevnyakdpl daenltkwgg allelaqfqt vsdakqmind
       61 aiskldealm inpskhetlw cmgnalstta fmttdsdeak vsfdkaaqff qravdadpgn
      121 elyqksleva akapelhmdf qkaaasqqgm ggassassts taakkkkssd lkydvfgwii
      181 lavgifawvg makshlpppp r
//
LOCUS       XP_040944783             191 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial import receptor subunit TOM20 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944783
VERSION     XP_040944783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088849.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..191
                     /product="mitochondrial import receptor subunit TOM20
                     isoform X2"
                     /calculated_mol_wt=20809
     Region          8..>150
                     /region_name="TOM20_plant"
                     /note="Plant specific mitochondrial import receptor
                     subunit TOM20; pfam06552"
                     /db_xref="CDD:284068"
     CDS             1..191
                     /gene="LOC121214727"
                     /coded_by="XM_041088849.1:224..799"
                     /db_xref="GeneID:121214727"
ORIGIN      
        1 mefsqadfdr llvaehtrkt sevnyakdpl daenltkwgg allelaqfqt vsdakqmind
       61 aiskldealm inpskhetlw cmgnalstta fmttdsdeak vsfdkaaqff qravdadpgn
      121 elyqksleva akapelhmdf qkaaasqqgm ggassassts twkvedlaaw pciqlfqgla
      181 iisygkelpf c
//
LOCUS       XP_016693008             594 aa            linear   PLN 06-AUG-2024
DEFINITION  65-kDa microtubule-associated protein 8 [Gossypium hirsutum].
ACCESSION   XP_016693008
VERSION     XP_016693008.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837519.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693008.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..594
                     /product="65-kDa microtubule-associated protein 8"
                     /calculated_mol_wt=67889
     Region          23..519
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..594
                     /gene="LOC107909837"
                     /coded_by="XM_016837519.2:447..2231"
                     /db_xref="GeneID:107909837"
ORIGIN      
        1 mgsfqappgm rssalletsc gyllqelqmi wnevgedqse rekvlleleq eclevyrrkv
       61 dranmsrarl hqelaeseae fthlllslge rslpgrpekm sgtikqqlds itpalqemrl
      121 rkeervnqfr avqgqiqkis aeiagqseyd dsitnvkvne ndlslkklee yqnelqrlhn
      181 eknnrlqqve kyiaavhnls atlgmessmi itkvhpslne lcgisknisd gilaklnstv
      241 eslqeekqkr leklhqlgka lknlwslmdt sygdrylfsh vidqlsvssa evsdpgsltl
      301 diiqqaeaev krldqlkask mkelflkkqn eleeicnksh meipsrseme nilnlintge
      361 idyaellmsi deqiprakee assrksimek vekwilarde erwleeysmd enrysvsrga
      421 hrnlrraera rvtvnkipal vdslmaktks weeerrkvfl ydevpllaml eeynlsrqer
      481 eeekqrqrmk kvqsqvvveq enfttsrpst snrrlsnksl nggfgnaspl nrrlslsiqq
      541 lgsngkssva lgtsfikegk keqgkrifpr pnftsqlrde tasvvstfsg plsp
//
LOCUS       XP_016693009             143 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA polymerase epsilon subunit C [Gossypium hirsutum].
ACCESSION   XP_016693009
VERSION     XP_016693009.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837520.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..143
                     /product="DNA polymerase epsilon subunit C"
                     /calculated_mol_wt=15981
     Region          12..90
                     /region_name="HFD_POLE4-like"
                     /note="histone-fold domain found in DNA polymerase epsilon
                     subunit 4 (POLE4) and similar proteins; cd22929"
                     /db_xref="CDD:467054"
     Site            order(18,22,25..26,28..33,35..36,38..40,42..53,65..69,81,
                     85..86,89)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467054"
     Site            order(25,27,35,46,49..50,53,57,60..61,78..81,84..85,
                     88..89)
                     /site_type="other"
                     /note="catalytic subunit binding site [polypeptide
                     binding]"
                     /db_xref="CDD:467054"
     CDS             1..143
                     /gene="LOC107909838"
                     /coded_by="XM_016837520.2:128..559"
                     /db_xref="GeneID:107909838"
ORIGIN      
        1 maedeavdpi rpefptarvk kimkldkdin kvnsealflv scstnlflrf laertaqvaa
       61 ekkkktvkld hlrtaikrhr ptsdflldsl pipaestqsv arsatdrdrs rpvadksapa
      121 gtrridlffr kpeneapiqi nda
//
LOCUS       XP_016693005             271 aa            linear   PLN 06-AUG-2024
DEFINITION  ELMO domain-containing protein C isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016693005
VERSION     XP_016693005.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837516.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..271
                     /product="ELMO domain-containing protein C isoform X1"
                     /calculated_mol_wt=30960
     Region          75..242
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..271
                     /gene="LOC107909836"
                     /coded_by="XM_016837516.2:288..1103"
                     /db_xref="GeneID:107909836"
ORIGIN      
        1 mssvvrnqgs cvairslsps ssinrcshas assdgatcgr pawigkrltc vcfkrkgvye
       61 giyfnitpkq eerlnrlrhr mkvyfdgsrp dhqealralw satyagkelh glisdqwkem
      121 gwqgrdpstd frgagfisle nllffaktfs tsfqcllkkq ggnrstweyp favagvnitf
      181 mimqmldlda svkprtfirs vflqmlsene wafdllycva fvvmdkqwle knatymefne
      241 vlkstrtqle rellmddvlr iedmpsftll c
//
LOCUS       XP_016693006             270 aa            linear   PLN 06-AUG-2024
DEFINITION  ELMO domain-containing protein C isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016693006
VERSION     XP_016693006.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837517.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..270
                     /product="ELMO domain-containing protein C isoform X2"
                     /calculated_mol_wt=30887
     Region          75..241
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..270
                     /gene="LOC107909836"
                     /coded_by="XM_016837517.2:574..1386"
                     /db_xref="GeneID:107909836"
ORIGIN      
        1 mssvvrnqgs cvairslsps ssinrcshas assdgatcgr pawigkrltc vcfkrkgvye
       61 giyfnitpkq eerlnrlrhr mkvyfdgsrp dhqealralw satyagkelh glisdqwkem
      121 gwqgrdpstd frgagfisle nllffaktfs tsfqcllkkq ggnrstweyp favagvnitf
      181 mimqmldlda lkprtfirsv flqmlsenew afdllycvaf vvmdkqwlek natymefnev
      241 lkstrtqler ellmddvlri edmpsftllc
//
LOCUS       XP_016693007             219 aa            linear   PLN 06-AUG-2024
DEFINITION  ELMO domain-containing protein A isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016693007
VERSION     XP_016693007.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837518.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..219
                     /product="ELMO domain-containing protein A isoform X3"
                     /calculated_mol_wt=25395
     Region          23..190
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..219
                     /gene="LOC107909836"
                     /coded_by="XM_016837518.2:220..879"
                     /db_xref="GeneID:107909836"
ORIGIN      
        1 mkgstltshp nsfvsklqee rlnrlrhrmk vyfdgsrpdh qealralwsa tyagkelhgl
       61 isdqwkemgw qgrdpstdfr gagfislenl lffaktfsts fqcllkkqgg nrstweypfa
      121 vagvnitfmi mqmldldasv kprtfirsvf lqmlsenewa fdllycvafv vmdkqwlekn
      181 atymefnevl kstrtqlere llmddvlrie dmpsftllc
//
LOCUS       XP_040944784             218 aa            linear   PLN 06-AUG-2024
DEFINITION  ELMO domain-containing protein A isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944784
VERSION     XP_040944784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088850.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..218
                     /product="ELMO domain-containing protein A isoform X4"
                     /calculated_mol_wt=25322
     Region          23..189
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..218
                     /gene="LOC107909836"
                     /coded_by="XM_041088850.1:219..875"
                     /db_xref="GeneID:107909836"
ORIGIN      
        1 mkgstltshp nsfvsklqee rlnrlrhrmk vyfdgsrpdh qealralwsa tyagkelhgl
       61 isdqwkemgw qgrdpstdfr gagfislenl lffaktfsts fqcllkkqgg nrstweypfa
      121 vagvnitfmi mqmldldalk prtfirsvfl qmlsenewaf dllycvafvv mdkqwlekna
      181 tymefnevlk strtqlerel lmddvlried mpsftllc
//
LOCUS       XP_016693004             429 aa            linear   PLN 06-AUG-2024
DEFINITION  probable arabinosyltransferase ARAD1 [Gossypium hirsutum].
ACCESSION   XP_016693004
VERSION     XP_016693004.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837515.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016693004.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..429
                     /product="probable arabinosyltransferase ARAD1"
                     /calculated_mol_wt=49489
     Region          47..361
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..429
                     /gene="LOC107909835"
                     /coded_by="XM_016837515.2:497..1786"
                     /db_xref="GeneID:107909835"
ORIGIN      
        1 mygkaaiclt laitfliscs iylgtvdlrs yffpvqsapl slcatgrplr vymydlprkf
       61 hvgmmgrrys kesgpvtmen lppwparagv rrqhsveywl masllydgrg geereavrvs
      121 dpatadaffv pffssmsvtt hghnmtdaat egdrrlqvel leilrqskyy qrsggrdhvi
      181 pmthpnafrf lrqqlnasil iivdfgrypr tmatlskdvv spyvhvvksf tdddpldpye
      241 nrttllffrg ntvrkdegki rvklakiltg nndvryeksv atpsnikmst kgmrlskfcl
      301 hpagdtpssc rlfdaivshc vpvvvsdkie lpfedeidyt kfsiffsmke alepgylvnq
      361 lrqfpkdrwv emwkrlkqvs hhyefqyppk eedavymiwr qvkhklpgaq lavhrnrrlk
      421 ipdwwrrkk
//
LOCUS       XP_016692999             424 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear pore complex protein NUP54 [Gossypium hirsutum].
ACCESSION   XP_016692999
VERSION     XP_016692999.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837510.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..424
                     /product="nuclear pore complex protein NUP54"
                     /calculated_mol_wt=45416
     Region          8..108
                     /region_name="CTD"
                     /note="Spt5 C-terminal nonapeptide repeat binding Spt4;
                     smart01104"
                     /db_xref="CDD:215026"
     Region          <51..>171
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          208..352
                     /region_name="Nup54"
                     /note="Nucleoporin complex subunit 54; pfam13874"
                     /db_xref="CDD:464011"
     CDS             1..424
                     /gene="LOC107909833"
                     /coded_by="XM_016837510.2:148..1422"
                     /db_xref="GeneID:107909833"
ORIGIN      
        1 mfgaqastsa fgtpsstpaf gtpsstpafg ttpstpafga psstpafgtp sstpafvtps
       61 stpafgapss tpafgapsst pafgtpsstp afgtpstpsf atgfggsslf stpfssqtqq
      121 qqtslfqqpq psiaapssgf gfqtslsatp fpnaqlttqm apvaplpfsl adrdiqaivd
      181 aykeeagnpk yafkhllfsv iepqfrgkpa gvsdimwaea maklegmess drerlwpqlv
      241 qgfkdlsqrl klqdevivsd aerlrmtqsn vkmlqrhfqa etlpwiqrmr qkeqslqrrl
      301 lkmmrileal egkgcrvplm kgevelaekl aaitrqlkgs gaelsrrvqn lltvsrvqan
      361 aigaggslyl pgstkiheqs ladmqevlqq qteaiarlgn vlkrdirdme iimaedtdmt
      421 envn
//
LOCUS       XP_016693001             424 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear pore complex protein NUP54 [Gossypium hirsutum].
ACCESSION   XP_016693001
VERSION     XP_016693001.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837512.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..424
                     /product="nuclear pore complex protein NUP54"
                     /calculated_mol_wt=45416
     Region          8..108
                     /region_name="CTD"
                     /note="Spt5 C-terminal nonapeptide repeat binding Spt4;
                     smart01104"
                     /db_xref="CDD:215026"
     Region          <51..>171
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          208..352
                     /region_name="Nup54"
                     /note="Nucleoporin complex subunit 54; pfam13874"
                     /db_xref="CDD:464011"
     CDS             1..424
                     /gene="LOC107909833"
                     /coded_by="XM_016837512.2:148..1422"
                     /db_xref="GeneID:107909833"
ORIGIN      
        1 mfgaqastsa fgtpsstpaf gtpsstpafg ttpstpafga psstpafgtp sstpafvtps
       61 stpafgapss tpafgapsst pafgtpsstp afgtpstpsf atgfggsslf stpfssqtqq
      121 qqtslfqqpq psiaapssgf gfqtslsatp fpnaqlttqm apvaplpfsl adrdiqaivd
      181 aykeeagnpk yafkhllfsv iepqfrgkpa gvsdimwaea maklegmess drerlwpqlv
      241 qgfkdlsqrl klqdevivsd aerlrmtqsn vkmlqrhfqa etlpwiqrmr qkeqslqrrl
      301 lkmmrileal egkgcrvplm kgevelaekl aaitrqlkgs gaelsrrvqn lltvsrvqan
      361 aigaggslyl pgstkiheqs ladmqevlqq qteaiarlgn vlkrdirdme iimaedtdmt
      421 envn
//
LOCUS       XP_016693000             424 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear pore complex protein NUP54 [Gossypium hirsutum].
ACCESSION   XP_016693000
VERSION     XP_016693000.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837511.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..424
                     /product="nuclear pore complex protein NUP54"
                     /calculated_mol_wt=45416
     Region          8..108
                     /region_name="CTD"
                     /note="Spt5 C-terminal nonapeptide repeat binding Spt4;
                     smart01104"
                     /db_xref="CDD:215026"
     Region          <51..>171
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          208..352
                     /region_name="Nup54"
                     /note="Nucleoporin complex subunit 54; pfam13874"
                     /db_xref="CDD:464011"
     CDS             1..424
                     /gene="LOC107909833"
                     /coded_by="XM_016837511.2:148..1422"
                     /db_xref="GeneID:107909833"
ORIGIN      
        1 mfgaqastsa fgtpsstpaf gtpsstpafg ttpstpafga psstpafgtp sstpafvtps
       61 stpafgapss tpafgapsst pafgtpsstp afgtpstpsf atgfggsslf stpfssqtqq
      121 qqtslfqqpq psiaapssgf gfqtslsatp fpnaqlttqm apvaplpfsl adrdiqaivd
      181 aykeeagnpk yafkhllfsv iepqfrgkpa gvsdimwaea maklegmess drerlwpqlv
      241 qgfkdlsqrl klqdevivsd aerlrmtqsn vkmlqrhfqa etlpwiqrmr qkeqslqrrl
      301 lkmmrileal egkgcrvplm kgevelaekl aaitrqlkgs gaelsrrvqn lltvsrvqan
      361 aigaggslyl pgstkiheqs ladmqevlqq qteaiarlgn vlkrdirdme iimaedtdmt
      421 envn
//
LOCUS       XP_016693002             424 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear pore complex protein NUP54 [Gossypium hirsutum].
ACCESSION   XP_016693002
VERSION     XP_016693002.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837513.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..424
                     /product="nuclear pore complex protein NUP54"
                     /calculated_mol_wt=45416
     Region          8..108
                     /region_name="CTD"
                     /note="Spt5 C-terminal nonapeptide repeat binding Spt4;
                     smart01104"
                     /db_xref="CDD:215026"
     Region          <51..>171
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          208..352
                     /region_name="Nup54"
                     /note="Nucleoporin complex subunit 54; pfam13874"
                     /db_xref="CDD:464011"
     CDS             1..424
                     /gene="LOC107909833"
                     /coded_by="XM_016837513.2:148..1422"
                     /db_xref="GeneID:107909833"
ORIGIN      
        1 mfgaqastsa fgtpsstpaf gtpsstpafg ttpstpafga psstpafgtp sstpafvtps
       61 stpafgapss tpafgapsst pafgtpsstp afgtpstpsf atgfggsslf stpfssqtqq
      121 qqtslfqqpq psiaapssgf gfqtslsatp fpnaqlttqm apvaplpfsl adrdiqaivd
      181 aykeeagnpk yafkhllfsv iepqfrgkpa gvsdimwaea maklegmess drerlwpqlv
      241 qgfkdlsqrl klqdevivsd aerlrmtqsn vkmlqrhfqa etlpwiqrmr qkeqslqrrl
      301 lkmmrileal egkgcrvplm kgevelaekl aaitrqlkgs gaelsrrvqn lltvsrvqan
      361 aigaggslyl pgstkiheqs ladmqevlqq qteaiarlgn vlkrdirdme iimaedtdmt
      421 envn
//
LOCUS       XP_040944785             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944785
VERSION     XP_040944785.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088851.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17489
     Region          3..90
                     /region_name="MULE"
                     /note="MULE transposase domain; pfam10551"
                     /db_xref="CDD:463145"
     CDS             1..150
                     /gene="LOC121214730"
                     /coded_by="XM_041088851.1:104..556"
                     /db_xref="GeneID:121214730"
ORIGIN      
        1 mfgrythrll vavaqdsggr ilpiayaitp gessddwdff fsrlrrhvcp qpdicvisdr
       61 gagilaafdr egslwqrtdh ryclrhiasn yyrqypykte rrqvtnmgye mnkdrfyeml
      121 ailqsqnreg adylcnirfe qwaqaydggl
//
LOCUS       XP_016692998              70 aa            linear   PLN 06-AUG-2024
DEFINITION  protein kish [Gossypium hirsutum].
ACCESSION   XP_016692998
VERSION     XP_016692998.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837509.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692998.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..70
                     /product="protein kish"
                     /calculated_mol_wt=7862
     Region          10..43
                     /region_name="DUF1242"
                     /note="Protein of unknown function (DUF1242); pfam06842"
                     /db_xref="CDD:462019"
     CDS             1..70
                     /gene="LOC107909832"
                     /coded_by="XM_016837509.2:540..752"
                     /db_xref="GeneID:107909832"
ORIGIN      
        1 msalfnfrsf ltvvllgict ctylkmqfpa ileqrtgfrg ffwkaarige rlspwvavgc
       61 ftmgvsiiff
//
LOCUS       XP_016692997             716 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein kinase-like protein ZAR1 [Gossypium hirsutum].
ACCESSION   XP_016692997
VERSION     XP_016692997.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837508.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692997.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..716
                     /product="receptor protein kinase-like protein ZAR1"
                     /calculated_mol_wt=77811
     Region          24..65
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <79..712
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          424..714
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(424..428,432,444,446,476,492..495,499,501,546,548,
                     550..551,553,564,567,587..590)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(424..428,432,444,446,476,492..495,499,546,548,
                     550..551,553,564)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(428,499,501,546,548,550,567,587..590)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(563..570,583..590)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..716
                     /gene="LOC107909831"
                     /coded_by="XM_016837508.2:332..2482"
                     /db_xref="GeneID:107909831"
ORIGIN      
        1 mkklvlfglf flflfphlkl afslspdgls llslksavdq psghsvfadw nendetpcnw
       61 sgvscknisg fpdprvvgva vsaknlrgyi pselgnliyl rrlnlhnnff ygsipdqlfn
      121 atslhslfly gnnlsgslpp sicklprlqn ldlsynslsg slpenlknck qlqrlilaqn
      181 kfsgeipggi wpeldnlvql dlssnefkgp ipstigelns lsgtlnlsyn hlsgnlpksl
      241 gdlpvtvsfd lrnnnlsgki petgsfanqg ptaflnnpll cgfplqkscn nsstsssgtq
      301 nsgpnsgetq kkglspglii lisaadaggv aligliivyi ywknkdssns csctgktkfg
      361 dnnkgkfcsv cpfgcinecr nndseledne kgeksgkgeg elvaidkgfs feldellras
      421 ayvlgksglg ivykvvlgng ipvavrrlgg eggeqrykef vaevqaigkv khpnvvklra
      481 yywapdekll isdfisngnl anairgrngq pstslswsvr rkivkgaarg laylhecspr
      541 kfvhgdvkps nilldnefqs yisdfglnrl initgnnpds ssggfigglp yksiqtertn
      601 syrapearvp gnratqkwdv ysfgvvllel ltgkspelsp ttstsmeild lvrwvrkgfe
      661 eekplsdmvd pmllqevhak kevlavfqva lacteadpei rprmktvsdn lerigs
//
LOCUS       XP_040944786             773 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_040944786
VERSION     XP_040944786.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088852.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..773
                     /product="U-box domain-containing protein 6"
                     /calculated_mol_wt=84730
     Region          280..332
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(281,284,286..289,308,312,321)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     CDS             1..773
                     /gene="LOC121214731"
                     /coded_by="XM_041088852.1:537..2858"
                     /db_xref="GeneID:121214731"
ORIGIN      
        1 mdiseveenl fvgsdaklhg emckilsaiy ckvlsifpsl eaarprsksg iqalcslhia
       61 lekaknvlqh cstcsklyla itgdsvllkf ekakcalids lrrvedivpq sigcqileiv
      121 selegtvfsl dllekqvgde mitllqhgrk fddcndnnel esfhqaatrl gitssraalt
      181 erralkklie raraeedkrk esivsyllhl mrkysklfrs evsddndsqg stpcsptvlg
      241 sledggsggn gqaferqlsk lssfnfkpni rrsgqipipp eelrcpislq lmydpviias
      301 gqtyericie kwlgdghdtc pktqqrlphl sltpnycvkg liaswceqng vpnpdgppes
      361 ldlnywrlal sesetantrs vdsvgfcnlk gvkvgplees gtieeiegke aenehpcvqe
      421 evselnvler yqdllsvlne eenlrkrckv veqirlllkd deearifmga ngfvegllqf
      481 ldsavregna maqeigamal fnlavnnnrn kelmlaagvi llledmvsns nahesataly
      541 lnlscleqak siigsskavp flvqllgset dpqckldalh tlynlstvhs nipsllsagi
      601 vnglqplvis gdnawaeksi avllnlaasq agisemvsac glisdlasvl dtgelieqeq
      661 avscllllcn gsekccqmvl qegvipalvs isvngttrgr eksqkllmlf reqrqrdhpp
      721 adanlsiets qdpmpatata qesnppcksv srkkmgrals flwksksysv yqc
//
LOCUS       XP_040944787             773 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 6 [Gossypium hirsutum].
ACCESSION   XP_040944787
VERSION     XP_040944787.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088853.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..773
                     /product="U-box domain-containing protein 6"
                     /calculated_mol_wt=84730
     Region          280..332
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(281,284,286..289,308,312,321)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     CDS             1..773
                     /gene="LOC121214731"
                     /coded_by="XM_041088853.1:884..3205"
                     /db_xref="GeneID:121214731"
ORIGIN      
        1 mdiseveenl fvgsdaklhg emckilsaiy ckvlsifpsl eaarprsksg iqalcslhia
       61 lekaknvlqh cstcsklyla itgdsvllkf ekakcalids lrrvedivpq sigcqileiv
      121 selegtvfsl dllekqvgde mitllqhgrk fddcndnnel esfhqaatrl gitssraalt
      181 erralkklie raraeedkrk esivsyllhl mrkysklfrs evsddndsqg stpcsptvlg
      241 sledggsggn gqaferqlsk lssfnfkpni rrsgqipipp eelrcpislq lmydpviias
      301 gqtyericie kwlgdghdtc pktqqrlphl sltpnycvkg liaswceqng vpnpdgppes
      361 ldlnywrlal sesetantrs vdsvgfcnlk gvkvgplees gtieeiegke aenehpcvqe
      421 evselnvler yqdllsvlne eenlrkrckv veqirlllkd deearifmga ngfvegllqf
      481 ldsavregna maqeigamal fnlavnnnrn kelmlaagvi llledmvsns nahesataly
      541 lnlscleqak siigsskavp flvqllgset dpqckldalh tlynlstvhs nipsllsagi
      601 vnglqplvis gdnawaeksi avllnlaasq agisemvsac glisdlasvl dtgelieqeq
      661 avscllllcn gsekccqmvl qegvipalvs isvngttrgr eksqkllmlf reqrqrdhpp
      721 adanlsiets qdpmpatata qesnppcksv srkkmgrals flwksksysv yqc
//
LOCUS       XP_016692987             272 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g60570 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692987
VERSION     XP_016692987.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692987.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..272
                     /product="F-box/kelch-repeat protein At5g60570 isoform X1"
                     /calculated_mol_wt=29887
     Region          67..>203
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          101..146
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          149..199
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..272
                     /gene="LOC107909828"
                     /coded_by="XM_016837498.2:45..863"
                     /db_xref="GeneID:107909828"
ORIGIN      
        1 msirkmsyrf yfcktfsnsh qvtfsvfllf fipspssskk itrccfvslk spssqglgls
       61 lgeiaivagg sdkngnvlqs aelynsevgt wqtlpdmnfp rklcsgffmd gkfyviggms
      121 shtdcltcge eynietrswr rienmypgrd agtyhpamrs pplvavvnnq lysadqatne
      181 vkkydkvnns wsvvkrlpvr adssygwgla fkacgnsllv igagghgghd dgvivlhswn
      241 peegnrdgqe wnvlavkara gafvyycalm gc
//
LOCUS       XP_040944788             234 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g60570 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944788
VERSION     XP_040944788.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088854.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="F-box/kelch-repeat protein At5g60570 isoform X2"
                     /calculated_mol_wt=25722
     Region          29..>165
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          63..108
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          111..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..234
                     /gene="LOC107909828"
                     /coded_by="XM_041088854.1:355..1059"
                     /db_xref="GeneID:107909828"
ORIGIN      
        1 mypypssvsk erlwkvsdrl fslgeiaiva ggsdkngnvl qsaelynsev gtwqtlpdmn
       61 fprklcsgff mdgkfyvigg msshtdcltc geeynietrs wrrienmypg rdagtyhpam
      121 rspplvavvn nqlysadqat nevkkydkvn nswsvvkrlp vradssygwg lafkacgnsl
      181 lvigagghgg hddgvivlhs wnpeegnrdg qewnvlavka ragafvyyca lmgc
//
LOCUS       XP_040944789             234 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g60570 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944789
VERSION     XP_040944789.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088855.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..234
                     /product="F-box/kelch-repeat protein At5g60570 isoform X2"
                     /calculated_mol_wt=25722
     Region          29..>165
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          63..108
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          111..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..234
                     /gene="LOC107909828"
                     /coded_by="XM_041088855.1:250..954"
                     /db_xref="GeneID:107909828"
ORIGIN      
        1 mypypssvsk erlwkvsdrl fslgeiaiva ggsdkngnvl qsaelynsev gtwqtlpdmn
       61 fprklcsgff mdgkfyvigg msshtdcltc geeynietrs wrrienmypg rdagtyhpam
      121 rspplvavvn nqlysadqat nevkkydkvn nswsvvkrlp vradssygwg lafkacgnsl
      181 lvigagghgg hddgvivlhs wnpeegnrdg qewnvlavka ragafvyyca lmgc
//
LOCUS       XP_040944790             233 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g60570 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944790
VERSION     XP_040944790.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088856.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..233
                     /product="F-box/kelch-repeat protein At5g60570 isoform X3"
                     /calculated_mol_wt=25635
     Region          28..>164
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          62..107
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          110..160
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..233
                     /gene="LOC107909828"
                     /coded_by="XM_041088856.1:247..948"
                     /db_xref="GeneID:107909828"
ORIGIN      
        1 mypypssvsk erlwkvsdrl flgeiaivag gsdkngnvlq saelynsevg twqtlpdmnf
       61 prklcsgffm dgkfyviggm sshtdcltcg eeynietrsw rrienmypgr dagtyhpamr
      121 spplvavvnn qlysadqatn evkkydkvnn swsvvkrlpv radssygwgl afkacgnsll
      181 vigagghggh ddgvivlhsw npeegnrdgq ewnvlavkar agafvyycal mgc
//
LOCUS       XP_040944791             233 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At5g60570 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944791
VERSION     XP_040944791.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088857.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..233
                     /product="F-box/kelch-repeat protein At5g60570 isoform X3"
                     /calculated_mol_wt=25635
     Region          28..>164
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          62..107
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          110..160
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..233
                     /gene="LOC107909828"
                     /coded_by="XM_041088857.1:354..1055"
                     /db_xref="GeneID:107909828"
ORIGIN      
        1 mypypssvsk erlwkvsdrl flgeiaivag gsdkngnvlq saelynsevg twqtlpdmnf
       61 prklcsgffm dgkfyviggm sshtdcltcg eeynietrsw rrienmypgr dagtyhpamr
      121 spplvavvnn qlysadqatn evkkydkvnn swsvvkrlpv radssygwgl afkacgnsll
      181 vigagghggh ddgvivlhsw npeegnrdgq ewnvlavkar agafvyycal mgc
//
LOCUS       XP_016692988             221 aa            linear   PLN 06-AUG-2024
DEFINITION  thioredoxin O1, mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016692988
VERSION     XP_016692988.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837499.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692988.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="thioredoxin O1, mitochondrial"
                     /calculated_mol_wt=24795
     Region          97..193
                     /region_name="TRX_family"
                     /note="TRX family; composed of two groups: Group I, which
                     includes proteins that exclusively encode a TRX domain;
                     and Group II, which are composed of fusion proteins of TRX
                     and additional domains. Group I TRX is a small ancient
                     protein that alter the redox...; cd02947"
                     /db_xref="CDD:239245"
     Site            order(122,125)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
     CDS             1..221
                     /gene="LOC107909829"
                     /coded_by="XM_016837499.2:103..768"
                     /db_xref="GeneID:107909829"
ORIGIN      
        1 mrgksilrpf ltcrtfsvrs vsssssssri lfnqsylmst pqtnssipkt pfpvwtpknl
       61 nlsrpfsdss pdffkpsfme tepvpvpenv vpvkseeefd aalskakdes vpavfyftat
      121 wcapcrfigp vmdelarrtp evtvykmdid eeglarklek lkitavptvq yfkegkqeve
      181 vvggdathii qtmkklynmr ypktddskqd atsgeevnek n
//
LOCUS       XP_040944792             170 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X1 [Gossypium hirsutum].
ACCESSION   XP_040944792
VERSION     XP_040944792.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088858.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..170
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X1"
                     /calculated_mol_wt=19281
     Region          16..149
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(24,80,83,90..93,122,124,139,143..145)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..170
                     /gene="LOC107909830"
                     /coded_by="XM_041088858.1:116..628"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeyg kenpirvlyh gyghydvlrs pvssasskqn rhygdccsgr
//
LOCUS       XP_016692989             168 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X2 [Gossypium hirsutum].
ACCESSION   XP_016692989
VERSION     XP_016692989.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837500.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X2"
                     /calculated_mol_wt=19213
     Region          16..149
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(24,80,83,90..93,122,124,139,143..145)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..168
                     /gene="LOC107909830"
                     /coded_by="XM_016837500.2:116..622"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeyg kenpirvlyh gyghydvlrs pqveekmteg kcrvklvp
//
LOCUS       XP_016692990             167 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X3 [Gossypium hirsutum].
ACCESSION   XP_016692990
VERSION     XP_016692990.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837501.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..167
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X3"
                     /calculated_mol_wt=19085
     Region          16..149
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(24,80,83,90..93,122,124,139,143..145)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..167
                     /gene="LOC107909830"
                     /coded_by="XM_016837501.2:115..618"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeyg kenpirvlyh gyghydvlrs pveekmtegk crvklvp
//
LOCUS       XP_040944793             167 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X4 [Gossypium hirsutum].
ACCESSION   XP_040944793
VERSION     XP_040944793.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088859.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..167
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X4"
                     /calculated_mol_wt=19014
     Region          17..146
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(21,77,80,87..90,119,121,136,140..142)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..167
                     /gene="LOC107909830"
                     /coded_by="XM_041088859.1:120..623"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigdgr clfrsvilga wlrsgkqspt ersqkvlade lrskvadefi
       61 krradtewfv egdfdnyvvq mrkphiwgge pellmcshvl ktaitvymke kksaslkvvs
      121 eygqeygken pirvlyhgyg hydvlrspvs sasskqnrhy gdccsgr
//
LOCUS       XP_016692991             165 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X5 [Gossypium hirsutum].
ACCESSION   XP_016692991
VERSION     XP_016692991.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837502.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..165
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X5"
                     /calculated_mol_wt=18946
     Region          17..146
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(21,77,80,87..90,119,121,136,140..142)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..165
                     /gene="LOC107909830"
                     /coded_by="XM_016837502.2:120..617"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigdgr clfrsvilga wlrsgkqspt ersqkvlade lrskvadefi
       61 krradtewfv egdfdnyvvq mrkphiwgge pellmcshvl ktaitvymke kksaslkvvs
      121 eygqeygken pirvlyhgyg hydvlrspqv eekmtegkcr vklvp
//
LOCUS       XP_016692992             164 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X6 [Gossypium hirsutum].
ACCESSION   XP_016692992
VERSION     XP_016692992.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837503.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..164
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X6"
                     /calculated_mol_wt=18796
     Region          16..149
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(24,80,83,90..93,122,124,139,143..145)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..164
                     /gene="LOC107909830"
                     /coded_by="XM_016837503.2:114..608"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeyg kenpirvlyh gyghydvlrs pvssasskhr wkkr
//
LOCUS       XP_040944794             164 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X7 [Gossypium hirsutum].
ACCESSION   XP_040944794
VERSION     XP_040944794.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088860.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..164
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X7"
                     /calculated_mol_wt=18818
     Region          17..146
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(21,77,80,87..90,119,121,136,140..142)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..164
                     /gene="LOC107909830"
                     /coded_by="XM_041088860.1:119..613"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigdgr clfrsvilga wlrsgkqspt ersqkvlade lrskvadefi
       61 krradtewfv egdfdnyvvq mrkphiwgge pellmcshvl ktaitvymke kksaslkvvs
      121 eygqeygken pirvlyhgyg hydvlrspve ekmtegkcrv klvp
//
LOCUS       XP_016692993             163 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X8 [Gossypium hirsutum].
ACCESSION   XP_016692993
VERSION     XP_016692993.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837504.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..163
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X8"
                     /calculated_mol_wt=18630
     Region          16..149
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(24,80,83,90..93,122,124,139,143..145)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..163
                     /gene="LOC107909830"
                     /coded_by="XM_016837504.2:113..604"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeyg kenpirvlyh gyghydvlrs pvssasskqw kkr
//
LOCUS       XP_040944795             162 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X9 [Gossypium hirsutum].
ACCESSION   XP_040944795
VERSION     XP_040944795.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088861.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..162
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X9"
                     /calculated_mol_wt=18396
     Region          8..141
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(16,72,75,82..85,114,116,131,135..137)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..162
                     /gene="LOC107909830"
                     /coded_by="XM_041088861.1:109..597"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mpkqeiwigi pgdgrclfrs vilgawlrsg kqsptersqk vladelrskv adefikrrad
       61 tewfvegdfd nyvvqmrkph iwggepellm cshvlktait vymkekksas lkvvseygqe
      121 ygkenpirvl yhgyghydvl rspvssassk qnrhygdccs gr
//
LOCUS       XP_040944796             160 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X10 [Gossypium hirsutum].
ACCESSION   XP_040944796
VERSION     XP_040944796.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088862.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..160
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X10"
                     /calculated_mol_wt=18363
     Region          17..146
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(21,77,80,87..90,119,121,136,140..142)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..160
                     /gene="LOC107909830"
                     /coded_by="XM_041088862.1:117..599"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigdgr clfrsvilga wlrsgkqspt ersqkvlade lrskvadefi
       61 krradtewfv egdfdnyvvq mrkphiwgge pellmcshvl ktaitvymke kksaslkvvs
      121 eygqeygken pirvlyhgyg hydvlrspvs sasskqwkkr
//
LOCUS       XP_040944797             159 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X11 [Gossypium hirsutum].
ACCESSION   XP_040944797
VERSION     XP_040944797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088863.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X11"
                     /calculated_mol_wt=18200
     Region          8..141
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(16,72,75,82..85,114,116,131,135..137)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..159
                     /gene="LOC107909830"
                     /coded_by="XM_041088863.1:73..552"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mpkqeiwigi pgdgrclfrs vilgawlrsg kqsptersqk vladelrskv adefikrrad
       61 tewfvegdfd nyvvqmrkph iwggepellm cshvlktait vymkekksas lkvvseygqe
      121 ygkenpirvl yhgyghydvl rspveekmte gkcrvklvp
//
LOCUS       XP_040944798             155 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X12 [Gossypium hirsutum].
ACCESSION   XP_040944798
VERSION     XP_040944798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088864.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X12"
                     /calculated_mol_wt=17745
     Region          8..141
                     /region_name="OTU_plant_OTU4-like"
                     /note="OTU (ovarian tumor) domain of deubiquitinating
                     enzyme OTU4 from plants and similar proteins; cd22760"
                     /db_xref="CDD:438597"
     Site            order(16,72,75,82..85,114,116,131,135..137)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438597"
     CDS             1..155
                     /gene="LOC107909830"
                     /coded_by="XM_041088864.1:45..512"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mpkqeiwigi pgdgrclfrs vilgawlrsg kqsptersqk vladelrskv adefikrrad
       61 tewfvegdfd nyvvqmrkph iwggepellm cshvlktait vymkekksas lkvvseygqe
      121 ygkenpirvl yhgyghydvl rspvssassk qwkkr
//
LOCUS       XP_016692995             138 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X13 [Gossypium hirsutum].
ACCESSION   XP_016692995
VERSION     XP_016692995.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837506.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..138
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X13"
                     /calculated_mol_wt=15617
     Region          16..132
                     /region_name="OTU"
                     /note="OTU (ovarian tumor) domain family; cl45892"
                     /db_xref="CDD:459237"
     CDS             1..138
                     /gene="LOC107909830"
                     /coded_by="XM_016837506.2:117..533"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeya ggrkddrg
//
LOCUS       XP_016692996             137 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X14 [Gossypium hirsutum].
ACCESSION   XP_016692996
VERSION     XP_016692996.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837507.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X14"
                     /calculated_mol_wt=15546
     Region          16..131
                     /region_name="OTU"
                     /note="OTU (ovarian tumor) domain family; cl45892"
                     /db_xref="CDD:459237"
     CDS             1..137
                     /gene="LOC107909830"
                     /coded_by="XM_016837507.2:116..529"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigipg dgrclfrsvi lgawlrsgkq sptersqkvl adelrskvad
       61 efikrradte wfvegdfdny vvqmrkphiw ggepellmcs hvlktaitvy mkekksaslk
      121 vvseygqeyg grkddrg
//
LOCUS       XP_040944799             135 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform
            X15 [Gossypium hirsutum].
ACCESSION   XP_040944799
VERSION     XP_040944799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088865.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..135
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 4 isoform X15"
                     /calculated_mol_wt=15350
     Region          17..129
                     /region_name="OTU"
                     /note="OTU (ovarian tumor) domain family; cl45892"
                     /db_xref="CDD:459237"
     CDS             1..135
                     /gene="LOC107909830"
                     /coded_by="XM_041088865.1:121..528"
                     /db_xref="GeneID:107909830"
ORIGIN      
        1 mfwlstfqap sqilfigdgr clfrsvilga wlrsgkqspt ersqkvlade lrskvadefi
       61 krradtewfv egdfdnyvvq mrkphiwgge pellmcshvl ktaitvymke kksaslkvvs
      121 eygqeyaggr kddrg
//
LOCUS       XP_016692983             700 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692983
VERSION     XP_016692983.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837494.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692983.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..700
                     /product="probable pre-mRNA-splicing factor ATP-dependent
                     RNA helicase DEAH4 isoform X1"
                     /calculated_mol_wt=78596
     Region          1..>641
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..700
                     /gene="LOC107909825"
                     /coded_by="XM_016837494.2:164..2266"
                     /db_xref="GeneID:107909825"
ORIGIN      
        1 manlpivqfe kkieetvdqn pvvviigetg sgkstqlsqm lhrkgytnsg ivavtqprrv
       61 aavsvsrrva qelgvrlgee vgyairfedr tsertrikyl tdgvllresl snpelnqysv
      121 iildeahers lntdillglm krlvkrrasn lkvlitsatl dgekvskffs dcplltvpgk
      181 lfpveifysk erptsyless lktamdihvr epegdilifm tgqddieklv skledkvrsl
      241 eegscmdaii lplhgslppe mqvrvfsppp pncrrfivat niaetsltvd gvvyvidsgy
      301 vkqrqynpat gmysldvvqi skvqanqrag ragrtrpgkc yrlypsrvyn ddfldvtvpe
      361 iqrsslagsv lylksldlpd idilkfdfld ppstesleda lkqlylidai dengsitsig
      421 rtmaelplep slsrtliean eygclsqalt vaamlsaetn llpgrsknne kkrkypplel
      481 pdgsgfgdhi qllqiyecwd endydigwck dydlqvrgmm fvkevrkqls qimqkiakgs
      541 sdvqvnqsqk rrqsyrnlmk alsigfasql aermrhhngf rtlgfkpqlv qvhpssvlkp
      601 dddglypnyv vyheliatsr pymrnvcave rqwvipilek ldkldvrkls ggglghveei
      661 tegntpdllk keavivtape eqeskiqaar erflarkgkk
//
LOCUS       XP_016692982             561 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692982
VERSION     XP_016692982.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837493.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692982.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..561
                     /product="probable pre-mRNA-splicing factor ATP-dependent
                     RNA helicase DEAH4 isoform X2"
                     /calculated_mol_wt=63121
     Region          12..>502
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..561
                     /gene="LOC107909825"
                     /coded_by="XM_016837493.2:234..1919"
                     /db_xref="GeneID:107909825"
ORIGIN      
        1 mkrlvkrras nlkvlitsat ldgekvskff sdcplltvpg klfpveifys kerptsyles
       61 slktamdihv repegdilif mtgqddiekl vskledkvrs leegscmdai ilplhgslpp
      121 emqvrvfspp ppncrrfiva tniaetsltv dgvvyvidsg yvkqrqynpa tgmysldvvq
      181 iskvqanqra gragrtrpgk cyrlypsrvy nddfldvtvp eiqrsslags vlylksldlp
      241 didilkfdfl dppstesled alkqlylida idengsitsi grtmaelple pslsrtliea
      301 neygclsqal tvaamlsaet nllpgrsknn ekkrkypple lpdgsgfgdh iqllqiyecw
      361 dendydigwc kdydlqvrgm mfvkevrkql sqimqkiakg ssdvqvnqsq krrqsyrnlm
      421 kalsigfasq laermrhhng frtlgfkpql vqvhpssvlk pdddglypny vvyheliats
      481 rpymrnvcav erqwvipile kldkldvrkl sggglghvee itegntpdll kkeavivtap
      541 eeqeskiqaa rerflarkgk k
//
LOCUS       XP_016692979             912 aa            linear   PLN 06-AUG-2024
DEFINITION  lipoxygenase 6, chloroplastic isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692979
VERSION     XP_016692979.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837490.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692979.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..912
                     /product="lipoxygenase 6, chloroplastic isoform X1"
                     /calculated_mol_wt=103526
     Region          9..912
                     /region_name="PLN02305"
                     /note="lipoxygenase"
                     /db_xref="CDD:215174"
     CDS             1..912
                     /gene="LOC107909824"
                     /coded_by="XM_016837490.2:247..2985"
                     /db_xref="GeneID:107909824"
ORIGIN      
        1 mlafkpkpss lrstfsgtal rppprlygvp vllsfsrttr srplvravis ddkavesakt
       61 spldqkhsng ssdssskqvk avvtikkkmk enitekienq wemlmngigr giliqlisee
      121 idpvtnsgks veafvrgwlp kpqehdnilq yvadftlpsd fgrpgavlit nqhakefhll
      181 eiviqdfdgv piyfpantwi hslndnpesr iifrnqaylp sqtppglkdl rredllsirg
      241 ngkgermpye riydydvynd lgkpdkerdl arpvlggeer pyprrcrtgr paskidplce
      301 sriekphpvy vprdeafeei kqdtfsagrl kallhnlvpl maatlsssdi pftcfseidk
      361 lyndgfilkd deqrklgdnl fignmmkqvl nvgqkllkye ipavirkdrf swlrdnefar
      421 qalagvnpvn ieilkefpil skldpaiygp pesvitkeli eqelhgmsvd kaleekrlfm
      481 vdfhdmllpf ikrinnlpgr ksyasrtvff ytktgilrpi aielslpptp ssnrnkyvyt
      541 hghdattywi wklakahvca ndagvhqlvn hwlrthacme pyiiathrql ssmhpiykll
      601 hphmrytlei nalarqslin gggiieasfs pgkyamelsa aayeswrfdr ealpadlihr
      661 gmavedpsap gglklliedy pyaadglliw saikewvesy vehfytepds vttdvelqaw
      721 wseiknrghh dkrnepwwpk latkedlsgi lttmiwtasg qhaainfgqy pfggympnrp
      781 tlmrklipqe tnpdfekfmq npqrtflssl ptqlqatkim avqdtlsths pdeeylgkmn
      841 efhsswindh kvlqmfdrfa aklgeieeii nernkdirlk nrtgagippy elllpssgpg
      901 vtgrgipnsv si
//
LOCUS       XP_016692980             908 aa            linear   PLN 06-AUG-2024
DEFINITION  lipoxygenase 6, chloroplastic isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692980
VERSION     XP_016692980.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837491.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692980.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..908
                     /product="lipoxygenase 6, chloroplastic isoform X2"
                     /calculated_mol_wt=103002
     Region          9..908
                     /region_name="PLN02305"
                     /note="lipoxygenase"
                     /db_xref="CDD:215174"
     CDS             1..908
                     /gene="LOC107909824"
                     /coded_by="XM_016837491.2:93..2819"
                     /db_xref="GeneID:107909824"
ORIGIN      
        1 msagqgdwst fsgtalrppp rlygvpvlls fsrttrsrpl vravisddka vesaktspld
       61 qkhsngssds sskqvkavvt ikkkmkenit ekienqweml mngigrgili qliseeidpv
      121 tnsgksveaf vrgwlpkpqe hdnilqyvad ftlpsdfgrp gavlitnqha kefhlleivi
      181 qdfdgvpiyf pantwihsln dnpesriifr nqaylpsqtp pglkdlrred llsirgngkg
      241 ermpyeriyd ydvyndlgkp dkerdlarpv lggeerpypr rcrtgrpask idplcesrie
      301 kphpvyvprd eafeeikqdt fsagrlkall hnlvplmaat lsssdipftc fseidklynd
      361 gfilkddeqr klgdnlfign mmkqvlnvgq kllkyeipav irkdrfswlr dnefarqala
      421 gvnpvnieil kefpilskld paiygppesv itkelieqel hgmsvdkale ekrlfmvdfh
      481 dmllpfikri nnlpgrksya srtvffytkt gilrpiaiel slpptpssnr nkyvythghd
      541 attywiwkla kahvcandag vhqlvnhwlr thacmepyii athrqlssmh piykllhphm
      601 rytleinala rqslingggi ieasfspgky amelsaaaye swrfdrealp adlihrgmav
      661 edpsapgglk lliedypyaa dglliwsaik ewvesyvehf ytepdsvttd velqawwsei
      721 knrghhdkrn epwwpklatk edlsgilttm iwtasgqhaa infgqypfgg ympnrptlmr
      781 klipqetnpd fekfmqnpqr tflsslptql qatkimavqd tlsthspdee ylgkmnefhs
      841 swindhkvlq mfdrfaaklg eieeiinern kdirlknrtg agippyelll pssgpgvtgr
      901 gipnsvsi
//
LOCUS       XP_016692978             754 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-dependent kinase G-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692978
VERSION     XP_016692978.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837489.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692978.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..754
                     /product="cyclin-dependent kinase G-2 isoform X1"
                     /calculated_mol_wt=84918
     Region          402..699
                     /region_name="STKc_CDC2L1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cell Division Cycle 2-like 1; cd07843"
                     /db_xref="CDD:173741"
     Site            order(414..417,422,435,437,454,468,486..489,492,494..495,
                     532,534,536..537,539,550,553,565,567..570,572,610..611)
                     /site_type="active"
                     /db_xref="CDD:173741"
     Site            order(414..417,422,435,437,468,486..489,492,495,536..537,
                     539,550)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173741"
     Site            order(446..448,450,453..454,456..457,460..461,473,475,482,
                     521,524..527,555,557..560,564..565,685,689..691)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:173741"
     Site            order(454,494,532,534,553,565,567..570,572,610..611)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173741"
     Site            order(549..560,562..572)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173741"
     CDS             1..754
                     /gene="LOC107909823"
                     /coded_by="XM_016837489.2:592..2856"
                     /db_xref="GeneID:107909823"
ORIGIN      
        1 maagrhggys dsefrdrdsd femtrqefpn sreyelsrng srdvararlw eardrararq
       61 kdikerdvin ggyrssssrs dsggnssggg shglrrrefs lrvvdkepge lssesgseda
      121 iesesvvkds evekvmenga lspvgrkrkf spivwdrsdk dvsmskskns pvvtvvhhpp
      181 prpkayhksp nsisgkavqt sfvienksqk phspspvlpd gpvgysalqs pedldfsppk
      241 ehvnfqdarh lededyvpar hisssrwaag dnspgdegei ledeeipkrr kklpllelsh
      301 nrlrnksatp elgelkregs egirarsses deqgarsksr sgddypgnds enddlmvidi
      361 khdrndgsls qsdtesenet nsrgtpepsa pplrsvnmlq gcrnvdefer lnkidegtyg
      421 vvyrakdkkt geivalkkvk mekeregfpl tslreinill sfhhpsivdv kevvvgsnld
      481 sifmvmeyme hdlkglmetm kqpfsqsevk clmlqllegv kylhdnwvlh rdlktsnlll
      541 nnqgelkicd fglarqygsp lkpythlvvt lwyrapelll garqystaid mwslgcimae
      601 llskeplfng ktefdqldki frtlgmpnet iwpgfsmlpg vkvnfvkhqy nllrkkfpat
      661 sftgtpvlsd agfdllnkll tydpekrita eaalnhewfr evplpktkaf mptfpaqhaq
      721 drrmrrmlks pdpleeqcrk elqqgefgtg glfg
//
LOCUS       XP_040944801             670 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-dependent kinase G-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944801
VERSION     XP_040944801.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088867.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..670
                     /product="cyclin-dependent kinase G-2 isoform X2"
                     /calculated_mol_wt=75124
     Region          402..649
                     /region_name="STKc_CDC2L1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cell Division Cycle 2-like 1; cd07843"
                     /db_xref="CDD:173741"
     Site            order(414..417,422,435,437,454,468,486..489,492,494..495,
                     532,534,536..537,539,550,553,565,567..570,572,610..611)
                     /site_type="active"
                     /db_xref="CDD:173741"
     Site            order(414..417,422,435,437,468,486..489,492,495,536..537,
                     539,550)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173741"
     Site            order(446..448,450,453..454,456..457,460..461,473,475,482,
                     521,524..527,555,557..560,564..565)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:173741"
     Site            order(454,494,532,534,553,565,567..570,572,610..611)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173741"
     Site            order(549..560,562..572)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173741"
     CDS             1..670
                     /gene="LOC107909823"
                     /coded_by="XM_041088867.1:592..2604"
                     /db_xref="GeneID:107909823"
ORIGIN      
        1 maagrhggys dsefrdrdsd femtrqefpn sreyelsrng srdvararlw eardrararq
       61 kdikerdvin ggyrssssrs dsggnssggg shglrrrefs lrvvdkepge lssesgseda
      121 iesesvvkds evekvmenga lspvgrkrkf spivwdrsdk dvsmskskns pvvtvvhhpp
      181 prpkayhksp nsisgkavqt sfvienksqk phspspvlpd gpvgysalqs pedldfsppk
      241 ehvnfqdarh lededyvpar hisssrwaag dnspgdegei ledeeipkrr kklpllelsh
      301 nrlrnksatp elgelkregs egirarsses deqgarsksr sgddypgnds enddlmvidi
      361 khdrndgsls qsdtesenet nsrgtpepsa pplrsvnmlq gcrnvdefer lnkidegtyg
      421 vvyrakdkkt geivalkkvk mekeregfpl tslreinill sfhhpsivdv kevvvgsnld
      481 sifmvmeyme hdlkglmetm kqpfsqsevk clmlqllegv kylhdnwvlh rdlktsnlll
      541 nnqgelkicd fglarqygsp lkpythlvvt lwyrapelll garqystaid mwslgcimae
      601 llskeplfng ktefdqldki frtlgmpnet iwpgfsmlpg vkvnfvkhql palgdsglaf
      661 wpplvtdlty
//
LOCUS       XP_040944802             665 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-dependent kinase G-2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944802
VERSION     XP_040944802.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088868.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..665
                     /product="cyclin-dependent kinase G-2 isoform X3"
                     /calculated_mol_wt=74531
     Region          402..649
                     /region_name="STKc_CDC2L1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cell Division Cycle 2-like 1; cd07843"
                     /db_xref="CDD:173741"
     Site            order(414..417,422,435,437,454,468,486..489,492,494..495,
                     532,534,536..537,539,550,553,565,567..570,572,610..611)
                     /site_type="active"
                     /db_xref="CDD:173741"
     Site            order(414..417,422,435,437,468,486..489,492,495,536..537,
                     539,550)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173741"
     Site            order(446..448,450,453..454,456..457,460..461,473,475,482,
                     521,524..527,555,557..560,564..565)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:173741"
     Site            order(454,494,532,534,553,565,567..570,572,610..611)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173741"
     Site            order(549..560,562..572)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173741"
     CDS             1..665
                     /gene="LOC107909823"
                     /coded_by="XM_041088868.1:592..2589"
                     /db_xref="GeneID:107909823"
ORIGIN      
        1 maagrhggys dsefrdrdsd femtrqefpn sreyelsrng srdvararlw eardrararq
       61 kdikerdvin ggyrssssrs dsggnssggg shglrrrefs lrvvdkepge lssesgseda
      121 iesesvvkds evekvmenga lspvgrkrkf spivwdrsdk dvsmskskns pvvtvvhhpp
      181 prpkayhksp nsisgkavqt sfvienksqk phspspvlpd gpvgysalqs pedldfsppk
      241 ehvnfqdarh lededyvpar hisssrwaag dnspgdegei ledeeipkrr kklpllelsh
      301 nrlrnksatp elgelkregs egirarsses deqgarsksr sgddypgnds enddlmvidi
      361 khdrndgsls qsdtesenet nsrgtpepsa pplrsvnmlq gcrnvdefer lnkidegtyg
      421 vvyrakdkkt geivalkkvk mekeregfpl tslreinill sfhhpsivdv kevvvgsnld
      481 sifmvmeyme hdlkglmetm kqpfsqsevk clmlqllegv kylhdnwvlh rdlktsnlll
      541 nnqgelkicd fglarqygsp lkpythlvvt lwyrapelll garqystaid mwslgcimae
      601 llskeplfng ktefdqldki frtlgmpnet iwpgfsmlpg vkvnfvkhql palgdsglaf
      661 wpplv
//
LOCUS       XP_040944804             472 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944804
VERSION     XP_040944804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088870.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 3 indels
            internal stop codons :: corrected 3 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..472
                     /product="LOW QUALITY PROTEIN: uncharacterized protein"
                     /calculated_mol_wt=52040
     Region          <394..415
                     /region_name="DUF2647"
                     /note="Protein of unknown function (DUF2647); pfam10839"
                     /db_xref="CDD:287774"
     CDS             1..472
                     /gene="LOC107907897"
                     /coded_by="XM_041088870.1:1..1419"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 3 codons;
                     substituted 3 bases at 3 genomic stop codons"
                     /db_xref="GeneID:107907897"
ORIGIN      
        1 mkdnsepals tnkeaisnat mnlmessila qderwrhaxh mqvgrevvfp vgnnswkrll
       61 iprrlrskrr nppeeglasd xlvdtaqtpt ggssgefsam geslteqcrv evegprvvnf
      121 fsrrrsndgi wgisivrrqi pglnpgqave ttkleygrgr gnfrwsgemr rdrkehqrrk
      181 hsagptltlr deisrlgstf armklkgidg gphkrwrldm prillkerga fgnadtggaw
      241 lssaravrcw tagdkpeege ddvksscplc pgrhtcyngr dkgsrsregd htavnsfpgl
      301 vhtarhtmga gharsrylnr kegdaegras dwsevvtral shmdssmcss apdpemwiiq
      361 gtledrwgds geiqcrsnfl ftrgixggpg gpprllssrx sihplsvygq lslehrfrfg
      421 lngkxkmehl ttylhrprtt rspxsfwgdg givpfepfff mlfpevgesc nq
//
LOCUS       XP_040944805             155 aa            linear   PLN 06-AUG-2024
DEFINITION  30S ribosomal protein S7, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040944805
VERSION     XP_040944805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088871.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="30S ribosomal protein S7, chloroplastic"
                     /calculated_mol_wt=17226
     Region          1..155
                     /region_name="rps7"
                     /note="ribosomal protein S7; CHL00053"
                     /db_xref="CDD:176994"
     Site            order(28..30,34..38,41..42,76,85,94..95,98,102,109,
                     115..116,119)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:271250"
     Site            order(37,40..41,44)
                     /site_type="other"
                     /note="S9 interface [polypeptide binding]"
                     /db_xref="CDD:271250"
     Site            149
                     /site_type="other"
                     /note="S11 interface [polypeptide binding]"
                     /db_xref="CDD:271250"
     CDS             1..155
                     /gene="LOC121214734"
                     /coded_by="XM_041088871.1:2337..2804"
                     /db_xref="GeneID:121214734"
ORIGIN      
        1 msrrgtaeek taksdpiyrn rlvnmlvnri lkhgkkslay qiiyralkki qqktetnpls
       61 vlrqairgvt pdiavkarrv ggsthqvpie igstqgkala irwllgasrk rpgrnmafkl
      121 sselvdaakg sgdairkkee thrmaeanra fahfr
//
LOCUS       XP_016692976             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized membrane protein YuiD [Gossypium hirsutum].
ACCESSION   XP_016692976
VERSION     XP_016692976.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837487.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..156
                     /product="uncharacterized membrane protein YuiD"
                     /calculated_mol_wt=16707
     Region          9..144
                     /region_name="DUF212"
                     /note="Divergent PAP2 family; pfam02681"
                     /db_xref="CDD:426924"
     CDS             1..156
                     /gene="LOC107909821"
                     /coded_by="XM_016837487.2:551..1021"
                     /db_xref="GeneID:107909821"
ORIGIN      
        1 mssswssilt nyplisafia fviaqtikff tswykekqwd lkqlvgsggm psshsstvta
       61 lataigfqeg fggalfatal ilacivmyda tgvrlhagrq aevlnqivye lpaehplaes
      121 rplrellght ppqvaaggll givtsfvgyf ifldar
//
LOCUS       XP_040944806            1141 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944806
VERSION     XP_040944806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088872.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1141
                     /product="uncharacterized protein"
                     /calculated_mol_wt=124175
     Region          105..>402
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1141
                     /gene="LOC107909820"
                     /coded_by="XM_041088872.1:752..4177"
                     /db_xref="GeneID:107909820"
ORIGIN      
        1 mppspalrys pgrelrgenh krwrslesgl nvqekdddla lfnemqsker enfllqssdd
       61 aedsfstklk yfsdfklgis vpvrgetsel ldadeekndy ewlltppdtp lfpslddepp
      121 panvarsgrp rtqpisisrs stmdksyrss rgsaspnrls psprsgsstl qsrgrpssap
      181 qsspirqatp trrsspspsk sstparrsst ptpqrtstgg rgtspirtnr gnstspkira
      241 wqanipgfsl dappnlrtsl adrpasyvrg sspasrngrd arfgrksmsp tasrsasssh
      301 shdrdqfssy skgsvassgd ddvdpihsip lggsthsvsr rvgafpsnkg ptfnkksarv
      361 lspssapkrs fdsalrqmdh rksppnmfrp llssvpstgf yagkvssvhr slmsrnssft
      421 tssnansdqg tsavldiegs dhqhddmase sgkgpygnvl eevfafdkmd vinqdasyer
      481 rndslnslie dadrdsairc dpdhseelgh rslevemssn sdalcdrgdl sevysfentk
      541 icskcgcryr vieqveeeis lctdcsrqhd ivsgdisdae ncpglsmkit eedkpfpele
      601 tsippsdsls qvidavepwi sqheknikls enfsqenslg gsltdrgeqr lgyqqemaqs
      661 tvdysildre tggqqlsysd ehsslkvnts evvgisvllk rsgsskgpvv lgrtfatips
      721 edlsyardss nsfrssvghg svsassstef sssrqtdarv qlngrkseld nyrydlnakp
      781 qsftlsqrss nnyqalslas stndenfegs irnlkfeeae etvvvslakt senleadlsl
      841 ttaaapkndc iewnksstvi dtltselled nsaaplppne dcvsyengds lpsnsriass
      901 vealattlds tleehgmrnd ipdgvdaaea agrnslttis eieidnscqs scsseldgls
      961 pnserkkkrs edlsvaipld vditaveern msdhtdgvle estvlvecrg gskgrsltle
     1021 eatdtilfcs siihdlayqa atiaiekess vplegsrptv tilgnstsdr kdlrgrtvgr
     1081 wtskshkvrq rrvetdvksv ptkavndena yepsihnvgi pnkmdsmnpp kleskcncsi
     1141 m
//
LOCUS       XP_040944807             449 aa            linear   PLN 06-AUG-2024
DEFINITION  3-oxoacyl-[acyl-carrier-protein] reductase 4 [Gossypium hirsutum].
ACCESSION   XP_040944807
VERSION     XP_040944807.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088873.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase 4"
                     /calculated_mol_wt=48202
     Region          54..155
                     /region_name="RsfS"
                     /note="Ribosomal silencing factor during starvation;
                     pfam02410"
                     /db_xref="CDD:460550"
     Region          209..448
                     /region_name="3oxo_ACP_reduc"
                     /note="3-oxoacyl-(acyl-carrier-protein) reductase;
                     TIGR01830"
                     /db_xref="CDD:273824"
     Site            order(213,215..218,237,239,263..265,291..294,314,341..343,
                     356,360,386..387,389,391..393)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187594"
     Site            order(225,229,272,298..301,303..305,308..309,312,316..317,
                     320..321,323..324,327..328,331,347..354,357..358,361..362,
                     365..366,368..373,375..376,388,409..411,413..416,419,
                     422..423,425..426,430,433,435..446,448)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:187594"
     Site            order(299..301,303,305,308..309,312,316..317,320..321,324,
                     327..328,331,346..354,357..358,361..362,365..366,368..370,
                     372..373)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187594"
     Site            order(315,343,356,360)
                     /site_type="active"
                     /db_xref="CDD:187594"
     CDS             1..449
                     /gene="LOC107909818"
                     /coded_by="XM_041088873.1:276..1625"
                     /db_xref="GeneID:107909818"
ORIGIN      
        1 mwatlrsryl hlsattlpss sltngswklg fsglnqtfss stverisnel lslqevekvl
       61 sdvraddvav vpvgnqcdwa dfmviatgrs pwhvkniaqa liykvkqkqk gakrmvlpsv
      121 qgqetgkwiv vdsgrvivha ldenarayyn lenlwiaksa qkepveeltk afvkvrrinn
      181 skkpaqgvra krveqassea aqeveapvai vtgasrgigk avalalgkag ckvlvnyvrs
      241 skeaeavske iesyggqavt fggdvlkean vdamiktald awgtvdilvn nagitrdtll
      301 mrmtklqwqe vidvnltgaf lctqaaakvm mkkrkgkiin issvaglvgn lgqanysaak
      361 agvigltktv areyasrnin vnavapgfia tdmtsklggd iekrilttip fgrygqpaev
      421 aglveflaln pasnyitgqv ftidggmvm
//
LOCUS       XP_016690990             436 aa            linear   PLN 06-AUG-2024
DEFINITION  lysine histidine transporter 2 [Gossypium hirsutum].
ACCESSION   XP_016690990
VERSION     XP_016690990.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835501.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690990.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..436
                     /product="lysine histidine transporter 2"
                     /calculated_mol_wt=48745
     Region          24..420
                     /region_name="Aa_trans"
                     /note="Transmembrane amino acid transporter protein;
                     pfam01490"
                     /db_xref="CDD:279788"
     CDS             1..436
                     /gene="LOC107908274"
                     /coded_by="XM_016835501.2:40..1350"
                     /db_xref="GeneID:107908274"
ORIGIN      
        1 mvyegseser erainewlpv tsnrnakwwy safhnvtamv gagvlslpya msqlgwgpgv
       61 timllswvvt lytiwqmvem hemipgkrfd ryhelgqyaf geklglwiii pqqltvdvss
      121 divymvtggq slkkfhdlvc pnckeirqty fimifgsvhf vlshlpnfns isgvslaaav
      181 mslsystiaw aasigkgvqp nvdysyksts npgkvfdfla glgeiafaya ghnvvleiqa
      241 tmpstpekps kgpmwkgviv aylivaicyl pvafigywaf gnsvndnill tlenptglia
      301 tanifvvihv igsyqifamp vfdmmesymv kelrfrpclr lrlisrtlyv aftmviaicf
      361 pffggllsff ggfafaptsy ylpciiwlii ckpkrfsltw finwicivlg vllmvlspig
      421 glrsiivsak dyeffs
//
LOCUS       XP_040944808             669 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944808
VERSION     XP_040944808.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088874.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..669
                     /product="uncharacterized protein"
                     /calculated_mol_wt=74015
     Region          26..295
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          186..419
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..216
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          219..249
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          251..283
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(295,306..307,309..310,314,322,331,333,335,339..340,
                     344..346,348..349,353,356,366,368,370,374..375,378,
                     383..384,386..387,391,394,403)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          333..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          368..403
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..669
                     /gene="LOC107909817"
                     /coded_by="XM_041088874.1:649..2658"
                     /db_xref="GeneID:107909817"
ORIGIN      
        1 mppsyfplrw estgdqwwya spidwaaang lydlviellh ldanlliklt slrrirrlet
       61 vwddeahfdd vakcrsfvak rllqecetkk gnnsliragy ggwllytaas agdmgfvkql
      121 lerdpflvfg egeygvtdif yaaarsknse lfrmlldfav ssrgclggge gelsetrsvf
      181 kwemmnravh aaarggslei lreilgdctd vlgyrdvqgs tllhtasgrg qvevvknlva
      241 sfeiitstdn qgntalhvaa yrgylkvvgf liqvspslas vkndygntfl hvavagfrtp
      301 gfrridrqie lmkqlvcgev vdirdiinvr nldgrtalhl avtenvqssl vellmsvpsi
      361 dlnvcdvdgl tpldllkrrp ksasseilik eliaaggisn cqdnvarsal vshlkehgvg
      421 asrgtsfrvp daeiflytgl entydagcdk esveysscls elsdlnlsts fdtkksssvn
      481 htarrlknfl hwprkkerka tstelvdtdd pvevtsayrn wpdihiplre kytksvslpn
      541 nkrtlalhnd lpsrssrkkf taglthgviq aaphlvapfk sppspfsvss ttspismdeq
      601 ksvldarcfy snssfngktt trmnpkqssv dkklmnhyfc fgaqglaved nrshtrldrs
      661 iksarslva
//
LOCUS       XP_016692971             504 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016692971
VERSION     XP_016692971.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837482.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692971.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..504
                     /product="pentatricopeptide repeat-containing protein
                     At3g04130, mitochondrial"
                     /calculated_mol_wt=57284
     Region          <106..>404
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          125..151
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          156..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          196..221
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          228..255
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          263..290
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          296..325
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          331..360
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          367..434
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          439..483
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          440..469
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          475..503
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..504
                     /gene="LOC107909815"
                     /coded_by="XM_016837482.2:433..1947"
                     /db_xref="GeneID:107909815"
ORIGIN      
        1 mmhplqnclr stwflvkpsi lcslfhashe ssslalpvea shytgsgsgv vgrcdvdilv
       61 skvhagtsed evfqclvndg ecnsiqlshd lidkllhrfk ddwksalgaf kwaasrpdyk
      121 hshqaydtmv dilgkmkqmd rmkdfleemr qghlvtlnti akvmrrlaga gkwenavrvf
      181 deletfglkk ntesmnllld tlckernvee areiflllks hiapdaytfn ifihgwckin
      241 rveeaqwtiq emkghgchps visystiiqf yccrynfqkv yelldemvvq gcppnvvtft
      301 tvmcslskae rfeevlqias rmkatgckpd tlfyncliha lgragqveda ikvfevempk
      361 tgvspntsty ncmiamlchh aqqqkalsll qdmgnlkick pevqtyypll kscfktgkid
      421 tllskllndm vnkhhlslds saysllihgl cranrseway nlfeemirkd itpnyrtcrl
      481 lldevkaknm ydaaekiegs mkkl
//
LOCUS       XP_040944809             504 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_040944809
VERSION     XP_040944809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088875.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..504
                     /product="pentatricopeptide repeat-containing protein
                     At3g04130, mitochondrial"
                     /calculated_mol_wt=57284
     Region          <106..>404
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          125..151
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          156..186
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          196..221
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          228..255
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          263..290
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          296..325
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          331..360
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          367..434
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          405..431
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          439..483
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          440..469
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          475..503
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..504
                     /gene="LOC107909815"
                     /coded_by="XM_041088875.1:611..2125"
                     /db_xref="GeneID:107909815"
ORIGIN      
        1 mmhplqnclr stwflvkpsi lcslfhashe ssslalpvea shytgsgsgv vgrcdvdilv
       61 skvhagtsed evfqclvndg ecnsiqlshd lidkllhrfk ddwksalgaf kwaasrpdyk
      121 hshqaydtmv dilgkmkqmd rmkdfleemr qghlvtlnti akvmrrlaga gkwenavrvf
      181 deletfglkk ntesmnllld tlckernvee areiflllks hiapdaytfn ifihgwckin
      241 rveeaqwtiq emkghgchps visystiiqf yccrynfqkv yelldemvvq gcppnvvtft
      301 tvmcslskae rfeevlqias rmkatgckpd tlfyncliha lgragqveda ikvfevempk
      361 tgvspntsty ncmiamlchh aqqqkalsll qdmgnlkick pevqtyypll kscfktgkid
      421 tllskllndm vnkhhlslds saysllihgl cranrseway nlfeemirkd itpnyrtcrl
      481 lldevkaknm ydaaekiegs mkkl
//
LOCUS       XP_016692972             342 aa            linear   PLN 06-AUG-2024
DEFINITION  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Gossypium
            hirsutum].
ACCESSION   XP_016692972
VERSION     XP_016692972.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837483.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692972.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..342
                     /product="glyceraldehyde-3-phosphate dehydrogenase,
                     cytosolic"
                     /calculated_mol_wt=37064
     Region          3..341
                     /region_name="PLN02272"
                     /note="glyceraldehyde-3-phosphate dehydrogenase"
                     /db_xref="CDD:177912"
     CDS             1..342
                     /gene="LOC107909816"
                     /coded_by="XM_016837483.2:140..1168"
                     /db_xref="GeneID:107909816"
ORIGIN      
        1 masdkkikig ingfgrigrl varvalqrnd velvavndpf istdymtymf kydsvhgqwk
       61 hhdlkvkdsk tllfgekpvt vfgirnpeei pwaeagaefv vestgvftdk dkaaahlkgg
      121 akkvvisaps kdapmfvmgv nekdykpeld ivsnascttn claplakvih drfgiveglm
      181 ttvhaitatq ktvdgpsmkd wrggraasfn iipsstgaak avgkvlpaln gkltgmsfrv
      241 ptidvsvvdl tvrleksasy deikaaikee segklkgilg yveedlvstd fvgdsrssif
      301 dakagialnk nfvklvswyd newgyssrvi dlivhmastk ac
//
LOCUS       XP_016692967            1459 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ABC transporter C family member 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692967
VERSION     XP_016692967.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692967.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1459
                     /product="putative ABC transporter C family member 15
                     isoform X1"
                     /calculated_mol_wt=164109
     Region          207..1449
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1459
                     /gene="LOC107909811"
                     /coded_by="XM_016837478.2:378..4757"
                     /db_xref="GeneID:107909811"
ORIGIN      
        1 mevalelvna sfvlallswi vidilkrrkh hngshshsdv ipdfkhsvgg ggvrasgaiv
       61 aifnviifif ylgfgfydyw ihsfvstklv csavtwflas lvsvlsknrt frerkrwplv
      121 lvlwwvfsci lvsfsvvvyv ihhlkskdlp yylpeanivd iaslpfllll ccclplavnr
      181 nsdlqrpllh kedekfskdd dtafasagiw sqltfrwlnp lfergrvekl elhhipqvpd
      241 setadkassl leeslrkrka dyyllpkava rtiwkslavn avfaglntia syigpflits
      301 fvnflsekhd gssyqyglvl afifffskta esltqrlwyf gahrigirvr aaltvliyke
      361 slstkfvcys ngkitnlinv daerigdffw yihgvwllpi qvllalvily rnmgaapsfa
      421 aifatilvmv sntplasrqk rlhskimeak dartkatset lksmrvlklh sweptflkkl
      481 lqlreternw lkkylytssa vaflfwaspt lvsvitfgvc ilvktpltsg tvlsalatfr
      541 ilqepiynlp elismivqtk vsydriqefl geevqrkfis dhgakasnva ieiepgeyaw
      601 etdskdikkp tikitnnlki legykiavcg svgsgkssll csilseipri sgaaikvygk
      661 kayvpqrawv qtgsirenil fgkdmkkafy edvleacaln qdiemwdnkd msivgergmn
      721 lsggqkqrvq laravysdsd ifilddpfsa vdahtgthlf kkclkgllsq ktviyathql
      781 efldaadivl vmkeglivqs gkyeelivds ngelvrqmna hrksldqvnq pqeddsltgg
      841 lcqisqtevi eekhgepncn dklfessqee etetgrvkws vystfvaaay kgalvpvivl
      901 cqvlfqglqm gsnywiawat eenrnvsreq ligifillsg gssifilgra vllatiavet
      961 aqrlflgmit svfrapisff dsnpssriln rsstdqstld tdipyrlagl afaliqlfsi
     1021 iilmshvawq ifllflailg isfwyqnyyi ttarelarmv girkapllhh fsesiagstt
     1081 ircfgqedrf meknlslidd ysrvafhnss tmewlcvrin flfnfvfflv lvilvslprs
     1141 aidpslagla atyglnlnvl qawviwnlcn venkmisver vlqfsnipse aplviedcrp
     1201 kpdwptkgti elenlqvqyk ptlpvvlkgi tctflgekki gvvgrtgsgk stliqalfrv
     1261 vepsggriii dgvdistigl qdlrsrlgii pqdptlfqgt irtnldplqq htdqeiwevl
     1321 nkchlvdivr rdqrlldapv aedgdnwsvg qrqlvclarv llkkrrilvl deatasidta
     1381 tdnviqetir ketcrctvit vahriptvid ndlvlvldkg miveydkpki lledrsswfs
     1441 nlvaeflrss ksnhpknlv
//
LOCUS       XP_040944810            1459 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ABC transporter C family member 15 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944810
VERSION     XP_040944810.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088876.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1459
                     /product="putative ABC transporter C family member 15
                     isoform X1"
                     /calculated_mol_wt=164109
     Region          207..1449
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1459
                     /gene="LOC107909811"
                     /coded_by="XM_041088876.1:109..4488"
                     /db_xref="GeneID:107909811"
ORIGIN      
        1 mevalelvna sfvlallswi vidilkrrkh hngshshsdv ipdfkhsvgg ggvrasgaiv
       61 aifnviifif ylgfgfydyw ihsfvstklv csavtwflas lvsvlsknrt frerkrwplv
      121 lvlwwvfsci lvsfsvvvyv ihhlkskdlp yylpeanivd iaslpfllll ccclplavnr
      181 nsdlqrpllh kedekfskdd dtafasagiw sqltfrwlnp lfergrvekl elhhipqvpd
      241 setadkassl leeslrkrka dyyllpkava rtiwkslavn avfaglntia syigpflits
      301 fvnflsekhd gssyqyglvl afifffskta esltqrlwyf gahrigirvr aaltvliyke
      361 slstkfvcys ngkitnlinv daerigdffw yihgvwllpi qvllalvily rnmgaapsfa
      421 aifatilvmv sntplasrqk rlhskimeak dartkatset lksmrvlklh sweptflkkl
      481 lqlreternw lkkylytssa vaflfwaspt lvsvitfgvc ilvktpltsg tvlsalatfr
      541 ilqepiynlp elismivqtk vsydriqefl geevqrkfis dhgakasnva ieiepgeyaw
      601 etdskdikkp tikitnnlki legykiavcg svgsgkssll csilseipri sgaaikvygk
      661 kayvpqrawv qtgsirenil fgkdmkkafy edvleacaln qdiemwdnkd msivgergmn
      721 lsggqkqrvq laravysdsd ifilddpfsa vdahtgthlf kkclkgllsq ktviyathql
      781 efldaadivl vmkeglivqs gkyeelivds ngelvrqmna hrksldqvnq pqeddsltgg
      841 lcqisqtevi eekhgepncn dklfessqee etetgrvkws vystfvaaay kgalvpvivl
      901 cqvlfqglqm gsnywiawat eenrnvsreq ligifillsg gssifilgra vllatiavet
      961 aqrlflgmit svfrapisff dsnpssriln rsstdqstld tdipyrlagl afaliqlfsi
     1021 iilmshvawq ifllflailg isfwyqnyyi ttarelarmv girkapllhh fsesiagstt
     1081 ircfgqedrf meknlslidd ysrvafhnss tmewlcvrin flfnfvfflv lvilvslprs
     1141 aidpslagla atyglnlnvl qawviwnlcn venkmisver vlqfsnipse aplviedcrp
     1201 kpdwptkgti elenlqvqyk ptlpvvlkgi tctflgekki gvvgrtgsgk stliqalfrv
     1261 vepsggriii dgvdistigl qdlrsrlgii pqdptlfqgt irtnldplqq htdqeiwevl
     1321 nkchlvdivr rdqrlldapv aedgdnwsvg qrqlvclarv llkkrrilvl deatasidta
     1381 tdnviqetir ketcrctvit vahriptvid ndlvlvldkg miveydkpki lledrsswfs
     1441 nlvaeflrss ksnhpknlv
//
LOCUS       XP_016692968            1422 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ABC transporter C family member 15 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692968
VERSION     XP_016692968.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692968.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1422
                     /product="putative ABC transporter C family member 15
                     isoform X2"
                     /calculated_mol_wt=159838
     Region          205..1422
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1422
                     /gene="LOC107909811"
                     /coded_by="XM_016837479.2:378..4646"
                     /db_xref="GeneID:107909811"
ORIGIN      
        1 mevalelvna sfvlallswi vidilkrrkh hngshshsdv ipdfkhsvgg ggvrasgaiv
       61 aifnviifif ylgfgfydyw ihsfvstklv csavtwflas lvsvlsknrt frerkrwplv
      121 lvlwwvfsci lvsfsvvvyv ihhlkskdlp yylpeanivd iaslpfllll ccclplavnr
      181 nsdlqrpllh kedekfskdd dtafasagiw sqltfrwlnp lfergrvekl elhhipqvpd
      241 setadkassl leeslrkrka dyyllpkava rtiwkslavn avfaglntia syigpflits
      301 fvnflsekhd gssyqyglvl afifffskta esltqrlwyf gahrigirvr aaltvliyke
      361 slstkfvcys ngkitnlinv daerigdffw yihgvwllpi qvllalvily rnmgaapsfa
      421 aifatilvmv sntplasrqk rlhskimeak dartkatset lksmrvlklh sweptflkkl
      481 lqlreternw lkkylytssa vaflfwaspt lvsvitfgvc ilvktpltsg tvlsalatfr
      541 ilqepiynlp elismivqtk vsydriqefl geevqrkfis dhgakasnva ieiepgeyaw
      601 etdskdikkp tikitnnlki legykiavcg svgsgkssll csilseipri sgaaikvygk
      661 kayvpqrawv qtgsirenil fgkdmkkafy edvleacaln qdiemwdnkd msivgergmn
      721 lsggqkqrvq laravysdsd ifilddpfsa vdahtgthlf kkclkgllsq ktviyathql
      781 efldaadivl vmkeglivqs gkyeelivds ngelvrqmna hrksldqvnq pqeddsltgg
      841 lcqisqtevi eekhgepncn dklfessqee etetgrvkws vystfvaaay kgalvpvivl
      901 cqvlfqglqm gsnywiawat eenrnvsreq ligifillsg gssifilgra vllatiavet
      961 aqrlflgmit svfrapisff dsnpssriln rsstdqstld tdipyrlagl afaliqlfsi
     1021 iilmshvawq ifllflailg isfwyqnyyi ttarelarmv girkapllhh fsesiagstt
     1081 ircfgqedrf meknlslidd ysrvafhnss tmewlcvrin flfnfvfflv lvilvslprs
     1141 aidpslagla atyglnlnvl qawviwnlcn venkmisver vlqfsnipse aplviedcrp
     1201 kpdwptkgti elenlqvqyk ptlpvvlkgi tctflgekki gvvgrtgsgk stliqalfrv
     1261 vepsggriii dgvdistigl qdlrsrlgii pqdptlfqgt irtnldplqq htdqeiwevl
     1321 nkchlvdivr rdqrlldapv aedgdnwsvg qrqlvclarv llkkrrilvl deatasidta
     1381 tdnviqetir ketcrctvit vahriptvid ndlvlvldke mv
//
LOCUS       XP_016692970              89 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692970
VERSION     XP_016692970.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837481.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..89
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9918
     Region          8..76
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..89
                     /gene="LOC107909814"
                     /coded_by="XM_016837481.2:125..394"
                     /db_xref="GeneID:107909814"
ORIGIN      
        1 masanrwlkp evyplfasvg vavgicamql vrnittnpev rvtkenraag vlnnfeegek
       61 yaehglrkfv rnrqpqimps vnnffsdpk
//
LOCUS       XP_016692959             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692959
VERSION     XP_016692959.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837470.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692959.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837470.2:1168..2793"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692961             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692961
VERSION     XP_016692961.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837472.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692961.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837472.2:1155..2780"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692965             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692965
VERSION     XP_016692965.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837476.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692965.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837476.2:308..1933"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692966             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692966
VERSION     XP_016692966.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837477.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692966.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837477.2:960..2585"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692960             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692960
VERSION     XP_016692960.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837471.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692960.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837471.2:339..1964"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692962             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692962
VERSION     XP_016692962.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837473.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692962.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837473.2:294..1919"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692963             541 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g08430 [Gossypium hirsutum].
ACCESSION   XP_016692963
VERSION     XP_016692963.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837474.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692963.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..541
                     /product="uncharacterized protein At5g08430"
                     /calculated_mol_wt=61804
     Region          38..113
                     /region_name="SWIB-MDM2_like"
                     /note="SWIB/MDM2 domain found in SWIB/MDM2 homologous
                     proteins; cd10567"
                     /db_xref="CDD:349489"
     Site            order(61,64..65,67..68,71..72,77,82..83,85,105..106)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349489"
     Region          162..267
                     /region_name="Plus-3"
                     /note="Plus-3 domain; cl02186"
                     /db_xref="CDD:470489"
     Region          485..523
                     /region_name="GYF"
                     /note="GYF domain; pfam02213"
                     /db_xref="CDD:460496"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..541
                     /gene="LOC107909810"
                     /coded_by="XM_016837474.2:995..2620"
                     /db_xref="GeneID:107909810"
ORIGIN      
        1 magnaasifw leeysgkslt pvgskrkaks kklefngwgs kplieflesi gkdttekisq
       61 hdvsdiigky indnnltnpa kkkrvlcder lysifgrkti srikvydlle thylenqdaw
      121 dddfffssee enlgeekkcl rlekktyqkk rgfetpkscf aaiipenikl vylkkslvld
      181 lskdfgsfea kvvdsfvrik sdpnnflqkn shqlvivkgm kkvsgnndvn adillqvsnf
      241 vkdvriamls eddfsqeece dlhqrmkkgl lkrptvaele akaralhedi tkhwlaaelt
      301 llpklidran ekgwrremfe ymerrqllqt peeqsrllcg vpnviaeeve petvpqdvkh
      361 ekdssqistv retleipsnp vsngklstll plkpvaqssp iilkddtvhc hdvqeqlirp
      421 rdnnvrstqv gnvpeengai vkhdflkald ttqvidlsdd dnddneehed snkteaqddv
      481 rsliwhyqdp qgdiqgpfsl lslknwmdld yfpddfkvwk tgqnlnnavl ladivgrmfq
      541 i
//
LOCUS       XP_016692958             207 aa            linear   PLN 06-AUG-2024
DEFINITION  mitotic spindle checkpoint protein MAD2 [Gossypium hirsutum].
ACCESSION   XP_016692958
VERSION     XP_016692958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837469.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..207
                     /product="mitotic spindle checkpoint protein MAD2"
                     /calculated_mol_wt=23395
     Region          16..191
                     /region_name="HORMA"
                     /note="HORMA domain; pfam02301"
                     /db_xref="CDD:460526"
     CDS             1..207
                     /gene="LOC107909809"
                     /coded_by="XM_016837469.2:355..978"
                     /db_xref="GeneID:107909809"
ORIGIN      
        1 masrtvakdi itlrgsaaiv seffgyaans ilynrgvype esfakvkkyg lpmlltqdeg
       61 vksfisnlta qlsewleagk lqrvvlvims katnevlerw nfsietdcev vekgvsreks
      121 dkeimreiqa imrqiassit ylpcldepcv fdvlaytdkd vavpftwies dpklianpqm
      181 vklhsfdtki hkvdtlvsyk ndeweeq
//
LOCUS       XP_040944811             496 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box protein SKIP14 [Gossypium hirsutum].
ACCESSION   XP_040944811
VERSION     XP_040944811.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088877.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..496
                     /product="F-box protein SKIP14"
                     /calculated_mol_wt=54555
     Region          218..259
                     /region_name="F-box-like"
                     /note="pfam12937"
                     /db_xref="CDD:463757"
     Region          229..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          255..283
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          284..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          310..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..496
                     /gene="LOC107909808"
                     /coded_by="XM_041088877.1:914..2404"
                     /db_xref="GeneID:107909808"
ORIGIN      
        1 malnfshrpi fpanmtednl vspmriangy llegiperng dgcskswfsn lelegcfdyg
       61 rdksgdrggs qesssddivd llpsdpfgmd itttftaisg wledleidyg rcvrdevgtg
      121 dgsyqlfagl nfiwnnamwf qtfpgsmgfe ckgsmsggfg gfshakeggd vsgcaghgsp
      181 cnvedvlsfg dedmvsvdqe neefqdcevr aeghegaphe alilalgylg vrdlfvienv
      241 ctslrsvvqn dpllwrdihi npplnekitd dvllqitgrg qgslqclslv dcqritdegl
      301 krvvennpkl iklsvpgctk lsiegilkcl ralkfmgsqg vkqlrigsly gvtqvhleel
      361 kfllgvddqi qqlvhkphfy srrnvylpce dgraidiemc prcenmrlvy dcpaegcqre
      421 ghaaqscrac iicvsrcaqc grclndseye enfclellcs dcskpqlpkc gvsrngmivm
      481 sssftlqqts nvhlhg
//
LOCUS       XP_016739676             168 aa            linear   PLN 06-AUG-2024
DEFINITION  probable ribosome biogenesis protein RLP24 [Gossypium hirsutum].
ACCESSION   XP_016739676
VERSION     XP_016739676.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016884187.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016739676.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..168
                     /product="probable ribosome biogenesis protein RLP24"
                     /calculated_mol_wt=19728
     Region          2..64
                     /region_name="Ribosomal_L24e"
                     /note="Ribosomal protein L24e; pfam01246"
                     /db_xref="CDD:460131"
     CDS             1..168
                     /gene="LOC107949519"
                     /coded_by="XM_016884187.2:33..539"
                     /db_xref="GeneID:107949519"
ORIGIN      
        1 mrlekcwfcs stvypghgiq fvrndakifr fckskchknf kmkrnprkvk wtkayrrlhg
       61 kdmtqdstfe ferkrnrper ydrnlaentl kaikkidkii sdrasdhikn rlktgkvqrq
      121 kearkqlelg ihlvkaplal aqdsslclpk ikvnvsqaqt eenqpmed
//
LOCUS       XP_016692890             710 aa            linear   PLN 06-AUG-2024
DEFINITION  probable thimet oligopeptidase [Gossypium hirsutum].
ACCESSION   XP_016692890
VERSION     XP_016692890.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837401.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692890.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..710
                     /product="probable thimet oligopeptidase"
                     /calculated_mol_wt=79750
     Region          69..701
                     /region_name="M3A_TOP"
                     /note="Peptidase M3 thimet oligopeptidase (TOP), also
                     includes neurolysin; cd06455"
                     /db_xref="CDD:341050"
     Site            order(500..501,504,529,629,634..635,637..638,641)
                     /site_type="active"
                     /db_xref="CDD:341050"
     CDS             1..710
                     /gene="LOC107909759"
                     /coded_by="XM_016837401.2:274..2406"
                     /db_xref="GeneID:107909759"
ORIGIN      
        1 mesegnsekk lsssklkkgs niipltgaaa lltlvvslai tainkrrnsk rkdlpgcnfr
       61 vnlsaseilk ladriiaksk evhdavasvp ldkvtyknvi splaeleaqq fplvqscvvp
      121 klvstsdkvr kasaeaekki dahisscskr edvycvvkaf aakgewmgpe arhyvhclmk
      181 efernglnlt atkreevqrl taqidelsfq yvqnlnddst svlfhenela glpaeflktl
      241 ekaengmfrv tlkshhvaav lelckigktr rlvamaygkr cgkanlsvle ylvqarhkfa
      301 rllgysnyae yalnprmakt pskvlefled issslsdlan kelamlkelk kqdegelpfg
      361 vedllyyvkk veqqefdldl galkqyfpvn lvlsgifkif qdlfglrfee iadadawhsd
      421 vrmfsvfdls sgellgyfyl dmykregkyg qtcvvalqng svafngarqv plallisqlq
      481 tdiggipsll rftevvsllh efghvvqhlc nrasfarfsg lrvdpdfvei pakvlenwcy
      541 esfslklisg fhqditmpik deickslkrw rysfsalklk qevlyclfdq iihsaenvdi
      601 felfkhlhpk vmvglpmleg tnpascfprc aigyeaacys riwsevfaad iftskfqdgl
      661 lnqhvgmqfr tkvlapggak dpieilsdfl grepsiqtfi dnkiecslwh
//
LOCUS       XP_016692887             523 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' theta isoform [Gossypium hirsutum].
ACCESSION   XP_016692887
VERSION     XP_016692887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837398.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..523
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' theta isoform"
                     /calculated_mol_wt=59886
     Region          51..>110
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          98..502
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..523
                     /gene="LOC107909758"
                     /coded_by="XM_016837398.2:747..2318"
                     /db_xref="GeneID:107909758"
ORIGIN      
        1 mikqilgrlp rkpskssenr efggssappl snpshsrssd imgnhrllid naplpgpnsa
       61 stfayshgsr lsqvvdqkln gnsgtapyea lpgfkdvpss ekqnlflrkl slccvvfdfs
      121 dpmknlkekd ikrqtllelv dyvssangkf sesvmqeavk mvsanlfrpl tpqprenkvl
      181 eafdleeeep lvdpawphlq ivyefflrfv aspetdakla kryidhsfvl klldlfdsed
      241 prereylkti lhriygkfmv hrpyirkain niffrfifet ekhngiaell evlgsiingf
      301 alplkeehkl flvraliplh kpkclpmyhq qlsycitqfv ekdckladtv irgllkywpi
      361 tnsskevmfl seleeileat qpaefqrcmv plfqkiarcl ssshfqvaer alylwnndhi
      421 eslirqnsrv ilpiifpale qnghnhwnqv vqsltlnvrk ifsdtdpelf eeclnkfren
      481 tekweeiktk heaawkriee iavsnaange avlvphvvas ets
//
LOCUS       XP_016692888             523 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' theta isoform [Gossypium hirsutum].
ACCESSION   XP_016692888
VERSION     XP_016692888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837399.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..523
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' theta isoform"
                     /calculated_mol_wt=59886
     Region          51..>110
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          98..502
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..523
                     /gene="LOC107909758"
                     /coded_by="XM_016837399.2:549..2120"
                     /db_xref="GeneID:107909758"
ORIGIN      
        1 mikqilgrlp rkpskssenr efggssappl snpshsrssd imgnhrllid naplpgpnsa
       61 stfayshgsr lsqvvdqkln gnsgtapyea lpgfkdvpss ekqnlflrkl slccvvfdfs
      121 dpmknlkekd ikrqtllelv dyvssangkf sesvmqeavk mvsanlfrpl tpqprenkvl
      181 eafdleeeep lvdpawphlq ivyefflrfv aspetdakla kryidhsfvl klldlfdsed
      241 prereylkti lhriygkfmv hrpyirkain niffrfifet ekhngiaell evlgsiingf
      301 alplkeehkl flvraliplh kpkclpmyhq qlsycitqfv ekdckladtv irgllkywpi
      361 tnsskevmfl seleeileat qpaefqrcmv plfqkiarcl ssshfqvaer alylwnndhi
      421 eslirqnsrv ilpiifpale qnghnhwnqv vqsltlnvrk ifsdtdpelf eeclnkfren
      481 tekweeiktk heaawkriee iavsnaange avlvphvvas ets
//
LOCUS       XP_040944812             523 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit
            B' theta isoform [Gossypium hirsutum].
ACCESSION   XP_040944812
VERSION     XP_040944812.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088878.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..523
                     /product="serine/threonine protein phosphatase 2A 57 kDa
                     regulatory subunit B' theta isoform"
                     /calculated_mol_wt=59886
     Region          51..>110
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          98..502
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..523
                     /gene="LOC107909758"
                     /coded_by="XM_041088878.1:487..2058"
                     /db_xref="GeneID:107909758"
ORIGIN      
        1 mikqilgrlp rkpskssenr efggssappl snpshsrssd imgnhrllid naplpgpnsa
       61 stfayshgsr lsqvvdqkln gnsgtapyea lpgfkdvpss ekqnlflrkl slccvvfdfs
      121 dpmknlkekd ikrqtllelv dyvssangkf sesvmqeavk mvsanlfrpl tpqprenkvl
      181 eafdleeeep lvdpawphlq ivyefflrfv aspetdakla kryidhsfvl klldlfdsed
      241 prereylkti lhriygkfmv hrpyirkain niffrfifet ekhngiaell evlgsiingf
      301 alplkeehkl flvraliplh kpkclpmyhq qlsycitqfv ekdckladtv irgllkywpi
      361 tnsskevmfl seleeileat qpaefqrcmv plfqkiarcl ssshfqvaer alylwnndhi
      421 eslirqnsrv ilpiifpale qnghnhwnqv vqsltlnvrk ifsdtdpelf eeclnkfren
      481 tekweeiktk heaawkriee iavsnaange avlvphvvas ets
//
LOCUS       XP_016690688             419 aa            linear   PLN 06-AUG-2024
DEFINITION  stemmadenine O-acetyltransferase [Gossypium hirsutum].
ACCESSION   XP_016690688
VERSION     XP_016690688.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690688.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..419
                     /product="stemmadenine O-acetyltransferase"
                     /calculated_mol_wt=46815
     Region          4..410
                     /region_name="PLN02481"
                     /note="Omega-hydroxypalmitate O-feruloyl transferase;
                     cl23789"
                     /db_xref="CDD:355048"
     CDS             1..419
                     /gene="LOC107907890"
                     /coded_by="XM_016835199.2:52..1311"
                     /db_xref="GeneID:107907890"
ORIGIN      
        1 mkpevevile eiikpssptp qqfrhyqlss ldqqippvyn hlvlfypatt naqtynfkls
       61 vsqalthfyp lagriknnsi vdcndegipf keaqvkcrls dflhdplpqq lnklypfpld
      121 daaelpmgiq fntflcggig igvcvshkig dalsfftfln twaaiargdt knvvlpelvs
      181 aklfpprnvs vpepvmekse kniatkrlvf saskieeira kyavdheirp sriealsafi
      241 wsrfiastke kpspngfyvi fhtvnirtkf epplsaqsfg nifrlavtvp sldngkddgs
      301 klvsqirdsi rkidkeyvrk lqagedifes tnqgdekget iplvftslcr fplyeadfgw
      361 gkpvwigsas lsaknlvvfm dtatgdgiea winlkeedva kfgsdeella tfkstvvwe
//
LOCUS       XP_016692883             589 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 [Gossypium hirsutum].
ACCESSION   XP_016692883
VERSION     XP_016692883.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837394.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692883.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..589
                     /product="protein WVD2-like 7"
                     /calculated_mol_wt=64318
     Region          473..>529
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..589
                     /gene="LOC107909752"
                     /coded_by="XM_016837394.2:314..2083"
                     /db_xref="GeneID:107909752"
ORIGIN      
        1 meesaclvrs fsnpadifrq vkegnpiral tesisfgrfm seplawekws tfshnrylee
       61 vekfskpgsv aqkkaffeah ykrraamraa alleqanvvt ndasqmgtin aasvdplsnt
      121 dlansdasls adqpeknvsd aeiintagvd agnlsvvren iditdaeqgl avmeedvnmg
      181 kcdqvensea fengdilski matpkilpkd cadpknstss skkkrtnsss kssvpsrtse
      241 lplhpskrma saqaksdanv aksagnsndk kktipnslhm sinvassagk tnktslrilr
      301 dsstptqtpt ralkksadqe nlapssekrr snstsklsnh givpkqttsr ignnhahink
      361 kpaldpneqr riaqkslhms mnftphaget nktspkisre sstlleaptr asvygglkha
      421 skvvqardrr ttsvlyksvs atgdgrwpsl sscskssnas gtstrctins apfsfrseer
      481 aakrkeffkk ledkmiskea eksqmlkksk ekaknelnkl rqstdvkarl nedschgsqf
      541 lsnyvkkits nwpqspksgr kpspstvqda nsihprrpsi kaesskmdq
//
LOCUS       XP_016692884             573 aa            linear   PLN 06-AUG-2024
DEFINITION  two-component response regulator ARR11 [Gossypium hirsutum].
ACCESSION   XP_016692884
VERSION     XP_016692884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837395.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..573
                     /product="two-component response regulator ARR11"
                     /calculated_mol_wt=64162
     Region          22..136
                     /region_name="REC_typeB_ARR-like"
                     /note="phosphoacceptor receiver (REC) domain of type B
                     Arabidopsis response regulators (ARRs) and similar
                     domains; cd17584"
                     /db_xref="CDD:381121"
     Region          202..255
                     /region_name="myb_SHAQKYF"
                     /note="myb-like DNA-binding domain, SHAQKYF class;
                     TIGR01557"
                     /db_xref="CDD:130620"
     CDS             1..573
                     /gene="LOC107909753"
                     /coded_by="XM_016837395.2:253..1974"
                     /db_xref="GeneID:107909753"
ORIGIN      
        1 mvlaesgfss prndafpagl rvlvvdddpt wlkilekmlk kcsyevttcc larealnllr
       61 erkdgydivi sdvnmpdmdg fkllehvgle mdlpvimmsv dgetsrvmkg vqhgacdyll
      121 kpirmkelrn iwqhvfrkki hevrdiesle gfesiqmtrs gydlfddghf lsgddttsgr
      181 krkdadnkhd drelsdpsst kkarvvwtvd lhqkfvkavn qigfdkvgpk kildlmnvpw
      241 ltrenvashl qkyrlylsrl qkesdiknsf igmkhsdlps kdstasfgph kamnmipddv
      301 pngtysfsas nslaqnvdlk gqgdlkgits apvaepkgal sidihdshea kstqmsfdhs
      361 lgsvdsavsf asfnsttplq ypwteipeiq fkqeceplhl engfsqlplp gpsmienean
      421 rsrievkpll desrsnfveh lgpvgaedlf piqsksqsln nqvfdlisat kssmktqdvg
      481 lnyladsefa lrnlnasgvg vplatlsedl qicwlqgdcy pmnyglqdle cstndnpalm
      541 aetpfhlydv lrfdhehlfd pteyyaidqg lfa
//
LOCUS       XP_016692881             932 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g67720 [Gossypium hirsutum].
ACCESSION   XP_016692881
VERSION     XP_016692881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837392.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..932
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g67720"
                     /calculated_mol_wt=104202
     Region          28..362
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          <413..613
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          416..438
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <425..>504
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          439..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          486..502
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          616..877
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(616..620,624,636,638,667,683..686,690,692,735,737,
                     739..740,742,753,756,773..776)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(616..620,624,636,638,667,683..686,690,735,737,
                     739..740,742,753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(620,690,692,735,737,739,756,773..776)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(752..758,768..770,772..776)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..932
                     /gene="LOC107909751"
                     /coded_by="XM_016837392.2:393..3191"
                     /db_xref="GeneID:107909751"
ORIGIN      
        1 mvsftqfcil yfyfiasvvs qvsefisidc gstsnytdps tglswssdmd imkhgrqvkv
       61 enpngnsmqf rtrrdfpsdn kkycynlstk errrylvrat fqygspanvd aypkfeiyld
      121 atqwatvtiq dgsrkyvnem iirapsdsid vciccattgf pfistlelrp lnlsmyatdy
      181 egdfflnvaa rvnfgaltkd lvrypddpyd rfwesdldrr qnflvgvapg taristsknv
      241 dirtreyppv kvmqtavvgt egelsyrlnl egfpanaray ayfaeiedla pnetrkfqlr
      301 epyipdysna vvniaenang sytlyepsym nvtldfvlsf tfsktndste gpllnameis
      361 kyqqiaakte rqdvtalnai rnmsaesvwv neggdpcvpt hwewvncspt pppritkial
      421 sgrnlkgqip seinhmeelt elwldfnslt gplpdmsnli nleilhlenn klsgslplyl
      481 grlpnlqaly iqnnsfsgei paallskkis fnyegnpglh neaqrklrfk lilgasigvl
      541 avllilflgs lillrnfrrk mshqkcdeng nstqpgtkqs tacsiarggh lldegvayci
      601 slsdleeatn nftkkigkgs fgsvyygkmk dgkevavktm adssshlnkq fvtevallsr
      661 ihhrnlvpli gyceeahqri lvyeymhngt lrdhihgsvn qkpldwlarl kiaedaakgl
      721 eylhtgcnps iihrdvktsn illdinmrak vsdfglsrqa eedlthvssv argtvgyldp
      781 eyyasqqlte ksdvysfgvv llelisgkkp vsvedfgpel nivhwarsli rkgdvisivd
      841 pflvgnvkie siwriaevai qcveqhgysr pkmqeiilai qdamkiekgd egnaklacgs
      901 srgqssrktl lasfleiesp dlsngslvps ar
//
LOCUS       XP_016692882             932 aa            linear   PLN 06-AUG-2024
DEFINITION  probable LRR receptor-like serine/threonine-protein kinase
            At1g67720 [Gossypium hirsutum].
ACCESSION   XP_016692882
VERSION     XP_016692882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837393.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..932
                     /product="probable LRR receptor-like
                     serine/threonine-protein kinase At1g67720"
                     /calculated_mol_wt=104202
     Region          28..362
                     /region_name="Malectin_like"
                     /note="Malectin-like domain; pfam12819"
                     /db_xref="CDD:432805"
     Region          <413..613
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          416..438
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <425..>504
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          439..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          486..502
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          616..877
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(616..620,624,636,638,667,683..686,690,692,735,737,
                     739..740,742,753,756,773..776)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(616..620,624,636,638,667,683..686,690,735,737,
                     739..740,742,753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(620,690,692,735,737,739,756,773..776)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(752..758,768..770,772..776)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..932
                     /gene="LOC107909751"
                     /coded_by="XM_016837393.2:217..3015"
                     /db_xref="GeneID:107909751"
ORIGIN      
        1 mvsftqfcil yfyfiasvvs qvsefisidc gstsnytdps tglswssdmd imkhgrqvkv
       61 enpngnsmqf rtrrdfpsdn kkycynlstk errrylvrat fqygspanvd aypkfeiyld
      121 atqwatvtiq dgsrkyvnem iirapsdsid vciccattgf pfistlelrp lnlsmyatdy
      181 egdfflnvaa rvnfgaltkd lvrypddpyd rfwesdldrr qnflvgvapg taristsknv
      241 dirtreyppv kvmqtavvgt egelsyrlnl egfpanaray ayfaeiedla pnetrkfqlr
      301 epyipdysna vvniaenang sytlyepsym nvtldfvlsf tfsktndste gpllnameis
      361 kyqqiaakte rqdvtalnai rnmsaesvwv neggdpcvpt hwewvncspt pppritkial
      421 sgrnlkgqip seinhmeelt elwldfnslt gplpdmsnli nleilhlenn klsgslplyl
      481 grlpnlqaly iqnnsfsgei paallskkis fnyegnpglh neaqrklrfk lilgasigvl
      541 avllilflgs lillrnfrrk mshqkcdeng nstqpgtkqs tacsiarggh lldegvayci
      601 slsdleeatn nftkkigkgs fgsvyygkmk dgkevavktm adssshlnkq fvtevallsr
      661 ihhrnlvpli gyceeahqri lvyeymhngt lrdhihgsvn qkpldwlarl kiaedaakgl
      721 eylhtgcnps iihrdvktsn illdinmrak vsdfglsrqa eedlthvssv argtvgyldp
      781 eyyasqqlte ksdvysfgvv llelisgkkp vsvedfgpel nivhwarsli rkgdvisivd
      841 pflvgnvkie siwriaevai qcveqhgysr pkmqeiilai qdamkiekgd egnaklacgs
      901 srgqssrktl lasfleiesp dlsngslvps ar
//
LOCUS       XP_016690987             492 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At3g48460 [Gossypium hirsutum].
ACCESSION   XP_016690987
VERSION     XP_016690987.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835498.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..492
                     /product="GDSL esterase/lipase At3g48460"
                     /calculated_mol_wt=52957
     Region          138..473
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(144,226,294,454,457)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(144,454,457)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(144,226,294)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     CDS             1..492
                     /gene="LOC107908271"
                     /coded_by="XM_016835498.2:6..1484"
                     /db_xref="GeneID:107908271"
ORIGIN      
        1 mmiskysfhv lflillvsfs fsyahfrhit pkeidpksfn shssplspsl tskgsgllsg
       61 sssskdsslf dnlsssnasg ssnisdsssv stnskgfafs gsfrgsgsls gstnsgasnn
      121 kefninlkan lsgcfskvfa fgdsytdtgn arligilksf vgavltrrvs qggnsnfklg
      181 grssngrmvv dflcdslnis tpipykaiss dfdfdsnsgv nfavggatsl sgdffvnhki
      241 ghtlmwkgip lgfqtqiewf nhfvtriack rkteeeckae mgkhliwlgq mgvddfarvi
      301 gssvsmrwlt ditvnhiski lttlldsggk fvvvqglppv gccplskllt pqsekdemgc
      361 slvinravma hnellqktle dfrvrhgtev tisyadyfna ykaimgnlag fgfsdgsqac
      421 cgvgggllnf nlhnlcgmtg ttacenpsnh vnwdglhlte amhkqitrlf lhggyckpsf
      481 ddmisrqrns gt
//
LOCUS       XP_040944814            1255 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MLP1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944814
VERSION     XP_040944814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088880.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1255
                     /product="protein MLP1-like isoform X1"
                     /calculated_mol_wt=143453
     Region          <93..889
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <644..>1245
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1255
                     /gene="LOC121214737"
                     /coded_by="XM_041088880.1:260..4027"
                     /db_xref="GeneID:121214737"
ORIGIN      
        1 mseindseds garnqsstyq eaesieishv dskedmfmda sdelnndnke avwstdrdnn
       61 aisdekpdav pkqfdevdng aynnedndnn hvvkemerlr alleqaaeek gkleskykyv
      121 qeemqtlsre iyvkdkeieg ltaklmssva etekdvknqq yevalerisa algsvidqgd
      181 llgdsgaeqi dlvekstlal iekynqflse vnqlrqcltk adsdfgvqef gtvfvaahde
      241 lyelrrkeaq lveniafled enrkffeqve sekamvemlk selektktev eqekmrcant
      301 keklsmavtk gkalvqqrda lkqsladkts elekclaelq ekssaleaae lhkeelvkne
      361 vlvvslqesl sektliieaf ehilsqidvp eelqsvdivg rarwlanerk elksvsmdfy
      421 rlkdticaie lpenvsfpdl dsrlawlkes fyhakddinm lqneisrtke aardevdhls
      481 aslstvqqek hyikeeldhl rneyeeivgk arqisldkdh lsasleaelv ekdyikkeld
      541 nlsteyenvv ekihrlssek nqmismlvea sgmmladqeg veeasylpml idrcfrkikd
      601 qpnassettf veaqlfeklq slfyvrdlel tlceevleed mlvrsqlngl snqlkvtsee
      661 lfalkeekdv lqkaleqsee kssllrekls mavkkgkglv qdrenlklll eeknseiekl
      721 rlelqheest vancrdqist lstdleripl lesdlaamke afdhilsqid vpeelqsmdi
      781 vgragwlake rkelgnvsmd fcrlkdtica idlpenvsfp dldsrlawlk esffqakddi
      841 nmlqneisri keaardeidh lsaslstvqq ekhyikdeld qlkneyeeiv gmahqissnk
      901 dhlsaslate lvekdyvrre lnnlsteyen vvekfhqlss ekdqmismli easgmmmadq
      961 egieessylp mlidrcfrki kdpptasset tfveaqlfek lqslfyvrdl eltlceevle
     1021 edmlvrsqln dlsdqmrvts kelfalkeek dvlqkylers eekssllrek lsmavkkgkg
     1081 lvqdrenlkl lleeknseie klklelqhee stvancrdqi stlstdleri pklesdlaam
     1141 regrdqlekf lfesnsilqr lvasighivi padstfqepv eklnflsgym ddcltakart
     1201 eqdllqvkee aknvavklae aeanmktlgd alavakndls qlaeekrdve fgkki
//
LOCUS       XP_040944815            1255 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MLP1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944815
VERSION     XP_040944815.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088881.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1255
                     /product="protein MLP1-like isoform X1"
                     /calculated_mol_wt=143453
     Region          <93..889
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <644..>1245
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1255
                     /gene="LOC121214737"
                     /coded_by="XM_041088881.1:200..3967"
                     /db_xref="GeneID:121214737"
ORIGIN      
        1 mseindseds garnqsstyq eaesieishv dskedmfmda sdelnndnke avwstdrdnn
       61 aisdekpdav pkqfdevdng aynnedndnn hvvkemerlr alleqaaeek gkleskykyv
      121 qeemqtlsre iyvkdkeieg ltaklmssva etekdvknqq yevalerisa algsvidqgd
      181 llgdsgaeqi dlvekstlal iekynqflse vnqlrqcltk adsdfgvqef gtvfvaahde
      241 lyelrrkeaq lveniafled enrkffeqve sekamvemlk selektktev eqekmrcant
      301 keklsmavtk gkalvqqrda lkqsladkts elekclaelq ekssaleaae lhkeelvkne
      361 vlvvslqesl sektliieaf ehilsqidvp eelqsvdivg rarwlanerk elksvsmdfy
      421 rlkdticaie lpenvsfpdl dsrlawlkes fyhakddinm lqneisrtke aardevdhls
      481 aslstvqqek hyikeeldhl rneyeeivgk arqisldkdh lsasleaelv ekdyikkeld
      541 nlsteyenvv ekihrlssek nqmismlvea sgmmladqeg veeasylpml idrcfrkikd
      601 qpnassettf veaqlfeklq slfyvrdlel tlceevleed mlvrsqlngl snqlkvtsee
      661 lfalkeekdv lqkaleqsee kssllrekls mavkkgkglv qdrenlklll eeknseiekl
      721 rlelqheest vancrdqist lstdleripl lesdlaamke afdhilsqid vpeelqsmdi
      781 vgragwlake rkelgnvsmd fcrlkdtica idlpenvsfp dldsrlawlk esffqakddi
      841 nmlqneisri keaardeidh lsaslstvqq ekhyikdeld qlkneyeeiv gmahqissnk
      901 dhlsaslate lvekdyvrre lnnlsteyen vvekfhqlss ekdqmismli easgmmmadq
      961 egieessylp mlidrcfrki kdpptasset tfveaqlfek lqslfyvrdl eltlceevle
     1021 edmlvrsqln dlsdqmrvts kelfalkeek dvlqkylers eekssllrek lsmavkkgkg
     1081 lvqdrenlkl lleeknseie klklelqhee stvancrdqi stlstdleri pklesdlaam
     1141 regrdqlekf lfesnsilqr lvasighivi padstfqepv eklnflsgym ddcltakart
     1201 eqdllqvkee aknvavklae aeanmktlgd alavakndls qlaeekrdve fgkki
//
LOCUS       XP_040944816            1255 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MLP1-like isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944816
VERSION     XP_040944816.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088882.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1255
                     /product="protein MLP1-like isoform X1"
                     /calculated_mol_wt=143453
     Region          <93..889
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <644..>1245
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1255
                     /gene="LOC121214737"
                     /coded_by="XM_041088882.1:197..3964"
                     /db_xref="GeneID:121214737"
ORIGIN      
        1 mseindseds garnqsstyq eaesieishv dskedmfmda sdelnndnke avwstdrdnn
       61 aisdekpdav pkqfdevdng aynnedndnn hvvkemerlr alleqaaeek gkleskykyv
      121 qeemqtlsre iyvkdkeieg ltaklmssva etekdvknqq yevalerisa algsvidqgd
      181 llgdsgaeqi dlvekstlal iekynqflse vnqlrqcltk adsdfgvqef gtvfvaahde
      241 lyelrrkeaq lveniafled enrkffeqve sekamvemlk selektktev eqekmrcant
      301 keklsmavtk gkalvqqrda lkqsladkts elekclaelq ekssaleaae lhkeelvkne
      361 vlvvslqesl sektliieaf ehilsqidvp eelqsvdivg rarwlanerk elksvsmdfy
      421 rlkdticaie lpenvsfpdl dsrlawlkes fyhakddinm lqneisrtke aardevdhls
      481 aslstvqqek hyikeeldhl rneyeeivgk arqisldkdh lsasleaelv ekdyikkeld
      541 nlsteyenvv ekihrlssek nqmismlvea sgmmladqeg veeasylpml idrcfrkikd
      601 qpnassettf veaqlfeklq slfyvrdlel tlceevleed mlvrsqlngl snqlkvtsee
      661 lfalkeekdv lqkaleqsee kssllrekls mavkkgkglv qdrenlklll eeknseiekl
      721 rlelqheest vancrdqist lstdleripl lesdlaamke afdhilsqid vpeelqsmdi
      781 vgragwlake rkelgnvsmd fcrlkdtica idlpenvsfp dldsrlawlk esffqakddi
      841 nmlqneisri keaardeidh lsaslstvqq ekhyikdeld qlkneyeeiv gmahqissnk
      901 dhlsaslate lvekdyvrre lnnlsteyen vvekfhqlss ekdqmismli easgmmmadq
      961 egieessylp mlidrcfrki kdpptasset tfveaqlfek lqslfyvrdl eltlceevle
     1021 edmlvrsqln dlsdqmrvts kelfalkeek dvlqkylers eekssllrek lsmavkkgkg
     1081 lvqdrenlkl lleeknseie klklelqhee stvancrdqi stlstdleri pklesdlaam
     1141 regrdqlekf lfesnsilqr lvasighivi padstfqepv eklnflsgym ddcltakart
     1201 eqdllqvkee aknvavklae aeanmktlgd alavakndls qlaeekrdve fgkki
//
LOCUS       XP_040944817            1252 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MLP1-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944817
VERSION     XP_040944817.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088883.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1252
                     /product="protein MLP1-like isoform X2"
                     /calculated_mol_wt=143063
     Region          <93..886
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <641..>1242
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1252
                     /gene="LOC121214737"
                     /coded_by="XM_041088883.1:258..4016"
                     /db_xref="GeneID:121214737"
ORIGIN      
        1 mseindseds garnqsstyq eaesieishv dskedmfmda sdelnndnke avwstdrdnn
       61 aisdekpdav pkqfdevdng aynnedndnn hvvkemerlr alleqaaeek gkleskykee
      121 mqtlsreiyv kdkeieglta klmssvaete kdvknqqyev alerisaalg svidqgdllg
      181 dsgaeqidlv ekstlaliek ynqflsevnq lrqcltkads dfgvqefgtv fvaahdelye
      241 lrrkeaqlve niafledenr kffeqvesek amvemlksel ektkteveqe kmrcantkek
      301 lsmavtkgka lvqqrdalkq sladktsele kclaelqeks saleaaelhk eelvknevlv
      361 vslqeslsek tliieafehi lsqidvpeel qsvdivgrar wlanerkelk svsmdfyrlk
      421 dticaielpe nvsfpdldsr lawlkesfyh akddinmlqn eisrtkeaar devdhlsasl
      481 stvqqekhyi keeldhlrne yeeivgkarq isldkdhlsa sleaelvekd yikkeldnls
      541 teyenvveki hrlsseknqm ismlveasgm mladqegvee asylpmlidr cfrkikdqpn
      601 assettfvea qlfeklqslf yvrdleltlc eevleedmlv rsqlnglsnq lkvtseelfa
      661 lkeekdvlqk aleqseekss llreklsmav kkgkglvqdr enlkllleek nseieklrle
      721 lqheestvan crdqistlst dleriplles dlaamkeafd hilsqidvpe elqsmdivgr
      781 agwlakerke lgnvsmdfcr lkdticaidl penvsfpdld srlawlkesf fqakddinml
      841 qneisrikea ardeidhlsa slstvqqekh yikdeldqlk neyeeivgma hqissnkdhl
      901 saslatelve kdyvrrelnn lsteyenvve kfhqlssekd qmismlieas gmmmadqegi
      961 eessylpmli drcfrkikdp ptassettfv eaqlfeklqs lfyvrdlelt lceevleedm
     1021 lvrsqlndls dqmrvtskel falkeekdvl qkylerseek ssllreklsm avkkgkglvq
     1081 drenlkllle eknseieklk lelqheestv ancrdqistl stdleripkl esdlaamreg
     1141 rdqlekflfe snsilqrlva sighivipad stfqepvekl nflsgymddc ltakarteqd
     1201 llqvkeeakn vavklaeaea nmktlgdala vakndlsqla eekrdvefgk ki
//
LOCUS       XP_040944818            1252 aa            linear   PLN 06-AUG-2024
DEFINITION  protein MLP1-like isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944818
VERSION     XP_040944818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088884.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1252
                     /product="protein MLP1-like isoform X2"
                     /calculated_mol_wt=143063
     Region          <93..886
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <641..>1242
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1252
                     /gene="LOC121214737"
                     /coded_by="XM_041088884.1:198..3956"
                     /db_xref="GeneID:121214737"
ORIGIN      
        1 mseindseds garnqsstyq eaesieishv dskedmfmda sdelnndnke avwstdrdnn
       61 aisdekpdav pkqfdevdng aynnedndnn hvvkemerlr alleqaaeek gkleskykee
      121 mqtlsreiyv kdkeieglta klmssvaete kdvknqqyev alerisaalg svidqgdllg
      181 dsgaeqidlv ekstlaliek ynqflsevnq lrqcltkads dfgvqefgtv fvaahdelye
      241 lrrkeaqlve niafledenr kffeqvesek amvemlksel ektkteveqe kmrcantkek
      301 lsmavtkgka lvqqrdalkq sladktsele kclaelqeks saleaaelhk eelvknevlv
      361 vslqeslsek tliieafehi lsqidvpeel qsvdivgrar wlanerkelk svsmdfyrlk
      421 dticaielpe nvsfpdldsr lawlkesfyh akddinmlqn eisrtkeaar devdhlsasl
      481 stvqqekhyi keeldhlrne yeeivgkarq isldkdhlsa sleaelvekd yikkeldnls
      541 teyenvveki hrlsseknqm ismlveasgm mladqegvee asylpmlidr cfrkikdqpn
      601 assettfvea qlfeklqslf yvrdleltlc eevleedmlv rsqlnglsnq lkvtseelfa
      661 lkeekdvlqk aleqseekss llreklsmav kkgkglvqdr enlkllleek nseieklrle
      721 lqheestvan crdqistlst dleriplles dlaamkeafd hilsqidvpe elqsmdivgr
      781 agwlakerke lgnvsmdfcr lkdticaidl penvsfpdld srlawlkesf fqakddinml
      841 qneisrikea ardeidhlsa slstvqqekh yikdeldqlk neyeeivgma hqissnkdhl
      901 saslatelve kdyvrrelnn lsteyenvve kfhqlssekd qmismlieas gmmmadqegi
      961 eessylpmli drcfrkikdp ptassettfv eaqlfeklqs lfyvrdlelt lceevleedm
     1021 lvrsqlndls dqmrvtskel falkeekdvl qkylerseek ssllreklsm avkkgkglvq
     1081 drenlkllle eknseieklk lelqheestv ancrdqistl stdleripkl esdlaamreg
     1141 rdqlekflfe snsilqrlva sighivipad stfqepvekl nflsgymddc ltakarteqd
     1201 llqvkeeakn vavklaeaea nmktlgdala vakndlsqla eekrdvefgk ki
//
LOCUS       XP_016692879             805 aa            linear   PLN 06-AUG-2024
DEFINITION  major antigen [Gossypium hirsutum].
ACCESSION   XP_016692879
VERSION     XP_016692879.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837390.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692879.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..805
                     /product="major antigen"
                     /calculated_mol_wt=90146
     Region          <2..>190
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <431..>680
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..805
                     /gene="LOC107909750"
                     /coded_by="XM_016837390.2:3399..5816"
                     /db_xref="GeneID:107909750"
ORIGIN      
        1 meklreegai qssrlteayn tintlesals qaemtvaslt ehsnnskvei tnlenelrkl
       61 kdeteiqare ladaeitiks ledalvkaen efsalqsekr agdqeistln skltvcmedl
      121 agsrgssask sielighlnn lqmlvkdqsl lstmkqcfdr nlehlkdvdl alknnrehll
      181 dkrseqlqdy plmedialla gcfsddidnn vnigmendye naingddvss cvirvaegfq
      241 lrnkifadrf egfskfldes igsllkklha tedevksmve nmeslkqnvk nlemreqeke
      301 kamailqddv etlfsacrda vedlhfevks tltefnslpg lenlnhglhp ggefvgrdma
      361 qqdiggnryi qtaeklfaat revqslvkfy ettnkavati vhnlqkdled trrasekaie
      421 erdvcqsrvf klesdveale esyrevthkv ddyqakediw kekeaellsl ynnmsmkeke
      481 akepllsatq lrtlldklsv ieiplvesed lephsstevk klfsiinsfa elqnqinlls
      541 yekdelqsml sqqsfeiehl keeierhvrn kpelevmkme lpeatfglek iivglggkel
      601 igspnsvgmr allpvlekqv nallleaess ksraqelgtk llgsqnavde lstkvklled
      661 slqgrtiqae vvqdrsifev psastgseis eiedagshvk ktvspvpsaa hvrimqkgsa
      721 dhlslnidse adrlinseet dedkgrmfkp lnttglipkq gksiadrvdg iwvsggrvls
      781 srprvrlgli ayclllhiwl lvtiv
//
LOCUS       XP_040944820             159 aa            linear   PLN 06-AUG-2024
DEFINITION  thylakoid lumenal 17.4 kDa protein, chloroplastic isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944820
VERSION     XP_040944820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088886.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..159
                     /product="thylakoid lumenal 17.4 kDa protein,
                     chloroplastic isoform X1"
                     /calculated_mol_wt=16797
     Region          <111..158
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..159
                     /gene="LOC107909749"
                     /coded_by="XM_041088886.1:409..888"
                     /db_xref="GeneID:107909749"
ORIGIN      
        1 mlsriinktp wlssssthvp lrvtcsssas krvpkseess splrtvacgl lavctvatas
       61 pviaanqrlp plstepnrce rafvgnticq angvynkpld lrfcdytnek snlkgksvaa
      121 almsdakfdg admseammsk ayvvgasfkg tdfsnavld
//
LOCUS       XP_040944821             157 aa            linear   PLN 06-AUG-2024
DEFINITION  thylakoid lumenal 17.4 kDa protein, chloroplastic isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944821
VERSION     XP_040944821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088887.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..157
                     /product="thylakoid lumenal 17.4 kDa protein,
                     chloroplastic isoform X2"
                     /calculated_mol_wt=16639
     Region          <111..156
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     CDS             1..157
                     /gene="LOC107909749"
                     /coded_by="XM_041088887.1:409..882"
                     /db_xref="GeneID:107909749"
ORIGIN      
        1 mlsriinktp wlssssthvp lrvtcsssas krvpkseess splrtvacgl lavctvatas
       61 pviaanqrlp plstepnrce rafvgnticq angvynkpld lrfcdytnek snlkgksvaa
      121 almsdakfdg admseammsk ayvvgasfkd fsnavld
//
LOCUS       XP_016692875              79 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NOI4 [Gossypium hirsutum].
ACCESSION   XP_016692875
VERSION     XP_016692875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837386.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..79
                     /product="protein NOI4"
                     /calculated_mol_wt=8783
     Region          6..40
                     /region_name="AvrRpt-cleavage"
                     /note="Cleavage site for pathogenic type III effector
                     avirulence factor Avr; pfam05627"
                     /db_xref="CDD:398967"
     CDS             1..79
                     /gene="LOC107909748"
                     /coded_by="XM_016837386.2:297..536"
                     /db_xref="GeneID:107909748"
ORIGIN      
        1 mssygkgqal pkfgewdvnd pasaegytai fniardekrt ggnvtvvate giksqqkqga
       61 rkekrkhkyc ikrkwfcfa
//
LOCUS       XP_016692874             466 aa            linear   PLN 06-AUG-2024
DEFINITION  regulator of G-protein signaling 1 [Gossypium hirsutum].
ACCESSION   XP_016692874
VERSION     XP_016692874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837385.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="regulator of G-protein signaling 1"
                     /calculated_mol_wt=52838
     Region          292..417
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     CDS             1..466
                     /gene="LOC107909746"
                     /coded_by="XM_016837385.2:277..1677"
                     /db_xref="GeneID:107909746"
ORIGIN      
        1 mancpavhgg ypsdyvavsi aifavilliv rssfpflihk vpsargsafw ipviqvvasf
       61 nfllslvmag nflkykkshw wlscyvwavw vegplgfgll mscriaqafq lyyafvkrrl
      121 ppvrshiflp livlpwiaga aiihvkkpln crchlqtywv iavmclhaly vavlvgftga
      181 irhiefrfde lkdlwqgilv sasliglwvs ayilneihdn iswlqvtsrf illftasslv
      241 lvffsisisq plltqisfik repiefktmc qalgipdsgl llhreqavvi dpnepldkll
      301 thkrfrqsfm afadsclage svhffeevhe lgkipiddpv rriymarhii nkyiiagsam
      361 evnishrsrq ailsttdlth pdlftnalne llqlmkmnla kdfwssmyfl klkdetsvrs
      421 ngyemeqmsg aysfsprlsc vnaiddpfhq dhfssgssqd vhhpyq
//
LOCUS       XP_040944822             466 aa            linear   PLN 06-AUG-2024
DEFINITION  regulator of G-protein signaling 1 [Gossypium hirsutum].
ACCESSION   XP_040944822
VERSION     XP_040944822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088888.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="regulator of G-protein signaling 1"
                     /calculated_mol_wt=52838
     Region          292..417
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     CDS             1..466
                     /gene="LOC107909746"
                     /coded_by="XM_041088888.1:277..1677"
                     /db_xref="GeneID:107909746"
ORIGIN      
        1 mancpavhgg ypsdyvavsi aifavilliv rssfpflihk vpsargsafw ipviqvvasf
       61 nfllslvmag nflkykkshw wlscyvwavw vegplgfgll mscriaqafq lyyafvkrrl
      121 ppvrshiflp livlpwiaga aiihvkkpln crchlqtywv iavmclhaly vavlvgftga
      181 irhiefrfde lkdlwqgilv sasliglwvs ayilneihdn iswlqvtsrf illftasslv
      241 lvffsisisq plltqisfik repiefktmc qalgipdsgl llhreqavvi dpnepldkll
      301 thkrfrqsfm afadsclage svhffeevhe lgkipiddpv rriymarhii nkyiiagsam
      361 evnishrsrq ailsttdlth pdlftnalne llqlmkmnla kdfwssmyfl klkdetsvrs
      421 ngyemeqmsg aysfsprlsc vnaiddpfhq dhfssgssqd vhhpyq
//
LOCUS       XP_040944823             466 aa            linear   PLN 06-AUG-2024
DEFINITION  regulator of G-protein signaling 1 [Gossypium hirsutum].
ACCESSION   XP_040944823
VERSION     XP_040944823.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088889.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="regulator of G-protein signaling 1"
                     /calculated_mol_wt=52838
     Region          292..417
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     CDS             1..466
                     /gene="LOC107909746"
                     /coded_by="XM_041088889.1:277..1677"
                     /db_xref="GeneID:107909746"
ORIGIN      
        1 mancpavhgg ypsdyvavsi aifavilliv rssfpflihk vpsargsafw ipviqvvasf
       61 nfllslvmag nflkykkshw wlscyvwavw vegplgfgll mscriaqafq lyyafvkrrl
      121 ppvrshiflp livlpwiaga aiihvkkpln crchlqtywv iavmclhaly vavlvgftga
      181 irhiefrfde lkdlwqgilv sasliglwvs ayilneihdn iswlqvtsrf illftasslv
      241 lvffsisisq plltqisfik repiefktmc qalgipdsgl llhreqavvi dpnepldkll
      301 thkrfrqsfm afadsclage svhffeevhe lgkipiddpv rriymarhii nkyiiagsam
      361 evnishrsrq ailsttdlth pdlftnalne llqlmkmnla kdfwssmyfl klkdetsvrs
      421 ngyemeqmsg aysfsprlsc vnaiddpfhq dhfssgssqd vhhpyq
//
LOCUS       XP_016692849             265 aa            linear   PLN 06-AUG-2024
DEFINITION  very-long-chain 3-oxoacyl-CoA reductase 1 [Gossypium hirsutum].
ACCESSION   XP_016692849
VERSION     XP_016692849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837360.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..265
                     /product="very-long-chain 3-oxoacyl-CoA reductase 1"
                     /calculated_mol_wt=28844
     Region          8..265
                     /region_name="PLN02780"
                     /note="ketoreductase/ oxidoreductase"
                     /db_xref="CDD:166421"
     CDS             1..265
                     /gene="LOC107909730"
                     /coded_by="XM_016837360.2:72..869"
                     /db_xref="GeneID:107909730"
ORIGIN      
        1 matqlpdfml ifvisclgfi slckpilgfi kwvwvmflrp pknlkhhygs waivtgctdg
       61 igtalafqla skglnlvlvg rnplklaata dairekfgaq vetrnvvidl aktsgeeisk
      121 tvedaiegld igvlvnnagl ayegarflhe vdsevaesii kvnivaatwi tkavvpimak
      181 kkkgaifnvg sgsyggfcsy plytiyaatk ayltmfsrsi nleykktgid iqcqiplfva
      241 tkmtkfkrss lfipsaemfs kaslr
//
LOCUS       XP_040944824            1371 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944824
VERSION     XP_040944824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088890.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1371
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=147803
     CDS             1..1371
                     /gene="LOC107909731"
                     /coded_by="XM_041088890.1:190..4305"
                     /db_xref="GeneID:107909731"
ORIGIN      
        1 mekpdstsgc gcsdvyhsif idtnldthla mivsdsetvs dlkkkilyeh plcfpnigei
       61 kinalkvkrk gflyhlsdsm fvksafggvs rswfllvdas sakehrenhn siepdagniv
      121 scfgtginny svdvvdllpv dtakrlsnvn daplpqdrdd chakqnsasq qfgfsnstke
      181 nsenlckeae htadsnnqvs fpatntgsrp klqskdvgdd kifedleasv atsvlkekqk
      241 tkkrnkyaih hdskvngalv vesgkdalds gcvleenlih ngpslalnda nlgnqihvde
      301 tsrslssdrn krstarkrma veginvpgeh seletdkhkd vahkdqehes kedsfqsrpa
      361 skkkrkaekk dvndnslien geqvtdlnta tsdctlgqkl entravvdpl ntesvkqnhl
      421 stanasggkk nrkrqksnps qvgsdvssak dvhaetfqav eankdkdlgs kgdpvsflgk
      481 csaggeisep glissmkmqe vsetnqvpqr nkyaihhdsk engalvvesg kdaldsgcvl
      541 eenlihngps lalndanlgs qihvdetsrs lssdrnkrst arkkmadggi nvpgehsele
      601 tnkhkdvahk nreheskeds fqswpvskkk rkaekkdvnd nsliengeqa tdlntatsdc
      661 tlgqklentr afvdplnaks vkqnhlstan asgeknrkrq ksnpsqvgse vsaakdvhve
      721 tfqaveaied kdlgskgdpv sflgkrsagg eisepgliss mkmqevsetn qvphsgagyn
      781 dmddtndgnl kskneaaqpd vasaikards ydqisslvdg hpapvsqegi dfrkefgvsr
      841 hgnqsgtlee kivepkkssk kvrkykkskd pvggteavdv vhnrgpasdl spverptfvn
      901 gdhlsdnaeq gsktdgkees kmkkldcsps vtdvkaddvi qdvleslkqc engpasaekt
      961 dnrprkrtkk ksstvvappe legeddvdhr dptvlvhnvs evsasskstr ktvmldsnsa
     1021 vqlngsdlgs nrdtikpqyd grliedvvsv dhskstrvdn heiddpcgng rvksqqkhei
     1081 vnsgkiiidk atrktgvetv vkgkknskpg lsskmlngnq gkdakaqaak sssiqsqrss
     1141 skvepsssnv ksnkplltis esaakeplqp nksdkidstp kstqgpinvn ssrssrdlkk
     1201 nnphavsssa letpkstpnl knggnghrlp ldiakaiesn srkvgnnlan kknllgttgt
     1261 ifghddkess ddedgignsd sstktpsdss sssdssgnsh vngssspngs ynskcekagg
     1321 rdkpkpgssn pksmslhail rnsssykkak ltasqaidsq seefvpdsqa p
//
LOCUS       XP_040944825            1370 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944825
VERSION     XP_040944825.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088891.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1370
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=147732
     CDS             1..1370
                     /gene="LOC107909731"
                     /coded_by="XM_041088891.1:190..4302"
                     /db_xref="GeneID:107909731"
ORIGIN      
        1 mekpdstsgc gcsdvyhsif idtnldthla mivsdsetvs dlkkkilyeh plcfpnigei
       61 kinalkvkrk gflyhlsdsm fvksafggvs rswfllvdas sakehrenhn siepdagniv
      121 scfgtginny svdvvdllpv dtakrlsnvn daplpqdrdd chakqnsasq qfgfsnstke
      181 nsenlckeae htadsnnqvs fpatntgsrp klqskdvgdd kifedleasv atsvlkekqk
      241 tkkrnkyaih hdskvngalv vesgkdalds gcvleenlih ngpslalnda nlgnqihvde
      301 tsrslssdrn krstarkrma veginvpgeh seletdkhkd vahkdqehes kedsfqsrpa
      361 skkkrkaekk dvndnslien geqvtdlnta tsdctlgqkl entravvdpl ntesvkqnhl
      421 stanasggkk nrkrqksnps qvgsdvssak dvhaetfqav eankdkdlgs kgdpvsflgk
      481 csaggeisep glissmkmqe vsetnqvpqr nkyaihhdsk engalvvesg kdaldsgcvl
      541 eenlihngps lalndanlgs qihvdetsrs lssdrnkrst arkkmadggi nvpgehsele
      601 tnkhkdvahk nreheskeds fqswpvskkk rkaekkdvnd nsliengeqa tdlntatsdc
      661 tlgqklentr afvdplnaks vkqnhlstan asgeknrkrq ksnpsqvgse vsaakdvhve
      721 tfqaveaied kdlgskgdpv sflgkrsagg eisepgliss mkmqevsetn qvphsggynd
      781 mddtndgnlk skneaaqpdv asaikardsy dqisslvdgh papvsqegid frkefgvsrh
      841 gnqsgtleek ivepkksskk vrkykkskdp vggteavdvv hnrgpasdls pverptfvng
      901 dhlsdnaeqg sktdgkeesk mkkldcspsv tdvkaddviq dvleslkqce ngpasaektd
      961 nrprkrtkkk sstvvappel egeddvdhrd ptvlvhnvse vsasskstrk tvmldsnsav
     1021 qlngsdlgsn rdtikpqydg rliedvvsvd hskstrvdnh eiddpcgngr vksqqkheiv
     1081 nsgkiiidka trktgvetvv kgkknskpgl sskmlngnqg kdakaqaaks ssiqsqrsss
     1141 kvepsssnvk snkplltise saakeplqpn ksdkidstpk stqgpinvns srssrdlkkn
     1201 nphavsssal etpkstpnlk nggnghrlpl diakaiesns rkvgnnlank knllgttgti
     1261 fghddkessd dedgignsds stktpsdsss ssdssgnshv ngssspngsy nskcekaggr
     1321 dkpkpgssnp ksmslhailr nsssykkakl tasqaidsqs eefvpdsqap
//
LOCUS       XP_016692851             258 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692851
VERSION     XP_016692851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837362.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..258
                     /product="uncharacterized protein"
                     /calculated_mol_wt=29569
     Region          120..201
                     /region_name="Methyltransf_11"
                     /note="Methyltransferase domain; pfam08241"
                     /db_xref="CDD:462406"
     CDS             1..258
                     /gene="LOC107909732"
                     /coded_by="XM_016837362.2:297..1073"
                     /db_xref="GeneID:107909732"
ORIGIN      
        1 mktaktkppl lkyyfltfas lsflilffcf snqrrhsltt fltttaatth sssasevdlk
       61 irpgytsyda yiqrqlnktl npklrkiwmt rdwdrkihvf snffrelqlq nllsnssksl
      121 cigarvgqev ealkrvgvsd svgidlvpsp plvlkgdfhn qtfdnetfdf efsnvfdhal
      181 yprkfvgeie rtlkpdgvcv lhlalstrad kysandlysv kplihlfqrs qlvrvrkvdg
      241 fgldtevifr kkkttqrs
//
LOCUS       XP_040944826             121 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944826
VERSION     XP_040944826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088892.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="CTP synthase isoform X1"
                     /calculated_mol_wt=13410
     Region          <22..>120
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..121
                     /gene="LOC107909733"
                     /coded_by="XM_041088892.1:1047..1412"
                     /db_xref="GeneID:107909733"
ORIGIN      
        1 mciscalsqt dgkytllvgd lqplldntkm krsqfchvea anilnihgvp niwhiplllr
       61 nqnahhsilk qlnllsiatp ldleawtrra etfdnltdsv riamvgnyvg ltdsylsvvk
      121 v
//
LOCUS       XP_040944827             121 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944827
VERSION     XP_040944827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088893.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="CTP synthase isoform X1"
                     /calculated_mol_wt=13410
     Region          <22..>120
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..121
                     /gene="LOC107909733"
                     /coded_by="XM_041088893.1:982..1347"
                     /db_xref="GeneID:107909733"
ORIGIN      
        1 mciscalsqt dgkytllvgd lqplldntkm krsqfchvea anilnihgvp niwhiplllr
       61 nqnahhsilk qlnllsiatp ldleawtrra etfdnltdsv riamvgnyvg ltdsylsvvk
      121 v
//
LOCUS       XP_016692853              92 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692853
VERSION     XP_016692853.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837364.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692853.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..92
                     /product="CTP synthase isoform X2"
                     /calculated_mol_wt=10286
     Region          <2..>91
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..92
                     /gene="LOC107909733"
                     /coded_by="XM_016837364.2:1084..1362"
                     /db_xref="GeneID:107909733"
ORIGIN      
        1 mkrsqfchve aanilnihgv pniwhiplll rnqnahhsil kqlnllsiat pldleawtrr
       61 aetfdnltds vriamvgnyv gltdsylsvv kv
//
LOCUS       XP_016692855              92 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692855
VERSION     XP_016692855.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837366.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692855.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..92
                     /product="CTP synthase isoform X2"
                     /calculated_mol_wt=10286
     Region          <2..>91
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..92
                     /gene="LOC107909733"
                     /coded_by="XM_016837366.2:1019..1297"
                     /db_xref="GeneID:107909733"
ORIGIN      
        1 mkrsqfchve aanilnihgv pniwhiplll rnqnahhsil kqlnllsiat pldleawtrr
       61 aetfdnltds vriamvgnyv gltdsylsvv kv
//
LOCUS       XP_016692854              92 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692854
VERSION     XP_016692854.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837365.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692854.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..92
                     /product="CTP synthase isoform X2"
                     /calculated_mol_wt=10286
     Region          <2..>91
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..92
                     /gene="LOC107909733"
                     /coded_by="XM_016837365.2:1056..1334"
                     /db_xref="GeneID:107909733"
ORIGIN      
        1 mkrsqfchve aanilnihgv pniwhiplll rnqnahhsil kqlnllsiat pldleawtrr
       61 aetfdnltds vriamvgnyv gltdsylsvv kv
//
LOCUS       XP_016692856              92 aa            linear   PLN 06-AUG-2024
DEFINITION  CTP synthase isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692856
VERSION     XP_016692856.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837367.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692856.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..92
                     /product="CTP synthase isoform X2"
                     /calculated_mol_wt=10286
     Region          <2..>91
                     /region_name="PLN02327"
                     /note="CTP synthase"
                     /db_xref="CDD:215186"
     CDS             1..92
                     /gene="LOC107909733"
                     /coded_by="XM_016837367.2:991..1269"
                     /db_xref="GeneID:107909733"
ORIGIN      
        1 mkrsqfchve aanilnihgv pniwhiplll rnqnahhsil kqlnllsiat pldleawtrr
       61 aetfdnltds vriamvgnyv gltdsylsvv kv
//
LOCUS       XP_016692858             535 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692858
VERSION     XP_016692858.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837369.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692858.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="ultraviolet-B receptor UVR8 isoform X1"
                     /calculated_mol_wt=57433
     Region          152..523
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..535
                     /gene="LOC107909734"
                     /coded_by="XM_016837369.2:225..1832"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqqgnrha nvlspelvms lkqvnervvq
      481 isltnsiywn ahtfaltesg klyafgagdk gqlgielann qtergnperv didln
//
LOCUS       XP_016692860             535 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692860
VERSION     XP_016692860.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837371.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692860.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="ultraviolet-B receptor UVR8 isoform X1"
                     /calculated_mol_wt=57433
     Region          152..523
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..535
                     /gene="LOC107909734"
                     /coded_by="XM_016837371.2:790..2397"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqqgnrha nvlspelvms lkqvnervvq
      481 isltnsiywn ahtfaltesg klyafgagdk gqlgielann qtergnperv didln
//
LOCUS       XP_016692861             535 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692861
VERSION     XP_016692861.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837372.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692861.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="ultraviolet-B receptor UVR8 isoform X1"
                     /calculated_mol_wt=57433
     Region          152..523
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..535
                     /gene="LOC107909734"
                     /coded_by="XM_016837372.2:733..2340"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqqgnrha nvlspelvms lkqvnervvq
      481 isltnsiywn ahtfaltesg klyafgagdk gqlgielann qtergnperv didln
//
LOCUS       XP_040944828             535 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944828
VERSION     XP_040944828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088894.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="ultraviolet-B receptor UVR8 isoform X1"
                     /calculated_mol_wt=57433
     Region          152..523
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..535
                     /gene="LOC107909734"
                     /coded_by="XM_041088894.1:1448..3055"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqqgnrha nvlspelvms lkqvnervvq
      481 isltnsiywn ahtfaltesg klyafgagdk gqlgielann qtergnperv didln
//
LOCUS       XP_016692859             535 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692859
VERSION     XP_016692859.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837370.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692859.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..535
                     /product="ultraviolet-B receptor UVR8 isoform X1"
                     /calculated_mol_wt=57433
     Region          152..523
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..535
                     /gene="LOC107909734"
                     /coded_by="XM_016837370.2:1325..2932"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqqgnrha nvlspelvms lkqvnervvq
      481 isltnsiywn ahtfaltesg klyafgagdk gqlgielann qtergnperv didln
//
LOCUS       XP_040944829             534 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944829
VERSION     XP_040944829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088895.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="ultraviolet-B receptor UVR8 isoform X2"
                     /calculated_mol_wt=57305
     Region          152..522
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..534
                     /gene="LOC107909734"
                     /coded_by="XM_041088895.1:1776..3380"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqgnrhan vlspelvmsl kqvnervvqi
      481 sltnsiywna htfaltesgk lyafgagdkg qlgielannq tergnpervd idln
//
LOCUS       XP_040944830             534 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944830
VERSION     XP_040944830.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088896.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="ultraviolet-B receptor UVR8 isoform X2"
                     /calculated_mol_wt=57305
     Region          152..522
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..534
                     /gene="LOC107909734"
                     /coded_by="XM_041088896.1:230..1834"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqgnrhan vlspelvmsl kqvnervvqi
      481 sltnsiywna htfaltesgk lyafgagdkg qlgielannq tergnpervd idln
//
LOCUS       XP_040944831             534 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944831
VERSION     XP_040944831.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088897.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="ultraviolet-B receptor UVR8 isoform X2"
                     /calculated_mol_wt=57305
     Region          152..522
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..534
                     /gene="LOC107909734"
                     /coded_by="XM_041088897.1:1322..2926"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqgnrhan vlspelvmsl kqvnervvqi
      481 sltnsiywna htfaltesgk lyafgagdkg qlgielannq tergnpervd idln
//
LOCUS       XP_040944832             534 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944832
VERSION     XP_040944832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088898.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="ultraviolet-B receptor UVR8 isoform X2"
                     /calculated_mol_wt=57305
     Region          152..522
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..534
                     /gene="LOC107909734"
                     /coded_by="XM_041088898.1:787..2391"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqgnrhan vlspelvmsl kqvnervvqi
      481 sltnsiywna htfaltesgk lyafgagdkg qlgielannq tergnpervd idln
//
LOCUS       XP_040944833             534 aa            linear   PLN 06-AUG-2024
DEFINITION  ultraviolet-B receptor UVR8 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944833
VERSION     XP_040944833.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088899.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="ultraviolet-B receptor UVR8 isoform X2"
                     /calculated_mol_wt=57305
     Region          152..522
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..534
                     /gene="LOC107909734"
                     /coded_by="XM_041088899.1:730..2334"
                     /db_xref="GeneID:107909734"
ORIGIN      
        1 mdattsgtpt vqyhnipdqp itaivaapvs aflrqvrhcf gdstpgefpl aanpsivlhv
       61 lttcnldpqd lakleatcsf frqpanfapd yelsiselaa ldmcqrraif kpmtdeerqs
      121 lkhrcggswk lvlrfllage accrreksqa iagpghsiav tssgavysfg snssgqlghg
      181 nteedwrpqq irslqgirii qaaagagrtm lisdagrvya fgkdsfgeae ygvqgtklvt
      241 tpqpveslkd ifvvqaaign fftavlsreg rvytfswgkd sklghktepn dvepqpllga
      301 lenipvvqia agycyllcla cqpsgmsvys vgcglggklg hgsrtdekyp rlieqfqlln
      361 lqpmvvaaga whaavvgrdg rvctwgwgry gclghgnedc esvpkvveal sdvkavhvat
      421 gdyttfvvsd dgdvysfgcg esaslghnta gegqgnrhan vlspelvmsl kqvnervvqi
      481 sltnsiywna htfaltesgk lyafgagdkg qlgielannq tergnpervd idln
//
LOCUS       XP_040944834             406 aa            linear   PLN 06-AUG-2024
DEFINITION  probable pectate lyase 5 [Gossypium hirsutum].
ACCESSION   XP_040944834
VERSION     XP_040944834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088900.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..406
                     /product="probable pectate lyase 5"
                     /calculated_mol_wt=44580
     Region          132..327
                     /region_name="Amb_all"
                     /note="Amb_all domain; smart00656"
                     /db_xref="CDD:214765"
     CDS             1..406
                     /gene="LOC107909736"
                     /coded_by="XM_041088900.1:199..1419"
                     /db_xref="GeneID:107909736"
ORIGIN      
        1 maiplsffll lfpllaptfv fsspvqdpeq vvqqvnesir natmarrslg flscgtgnpi
       61 ddcwrcdhhw eknrqkladc aigfgkhaig grdgkiyvvt dpsdhdpvnp kpgnlryavi
      121 qdeplwiifa rdmtiklkee llmnsfktid grgvsvhisg gpcitvqyvt niiihginih
      181 dckrggnayv rdspthygwr tisdgdgvsi fggshvwvdh cslsncndgl idaihgstai
      241 tisnnylthh nkvmllghsd tykqdknmqv tiafnhfgeg lvqrmprcrh gyfhvvnndy
      301 thwemyaigg sadptinsqg nrflapndad nkevtkheda pqsqwkhwnw rsegdlmlng
      361 afftasgtga sssyakassl garpsslvss ltagagalvc kkgshc
//
LOCUS       XP_016692866             427 aa            linear   PLN 06-AUG-2024
DEFINITION  actin-related protein 3 [Gossypium hirsutum].
ACCESSION   XP_016692866
VERSION     XP_016692866.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837377.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..427
                     /product="actin-related protein 3"
                     /calculated_mol_wt=47692
     Region          8..419
                     /region_name="ASKHA_NBD_Arp3-like"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein3 (Arp3) and similar proteins; cd10221"
                     /db_xref="CDD:466822"
     CDS             1..427
                     /gene="LOC107909738"
                     /coded_by="XM_016837377.2:442..1725"
                     /db_xref="GeneID:107909738"
ORIGIN      
        1 mdptsrpavv idngtgytkm gfagnvepcf iqptvvavne sflnqsrtss ksnwsaqysa
       61 gvmadldffi gdealtksrs snaynltypi rngqvynwda merywqqcif nylrcdpedh
      121 yflltesplt apenreytge imfetfnvpg lyiavnsvla laagyttskc emtgvvvdvg
      181 dgathivpva dgyvigssik sipiagkdvt lfiqqlmrer gekippedsf eaarkvkemy
      241 cytcsdvvke fnkhdkepgk yikhwrgfrp ktgapyscdi gyerflgpev ffspeiyssd
      301 fttplpvvid kciqsapidt rralyknivl sggstmfkdf hrrlqrdlkk ivdarvlasd
      361 trlggevkah pvevnvvshp iqrfavwfgg svlastpeff aachtkaeye eygasicrtn
      421 pvfkgmy
//
LOCUS       XP_016692867             802 aa            linear   PLN 06-AUG-2024
DEFINITION  oxysterol-binding protein-related protein 1D [Gossypium hirsutum].
ACCESSION   XP_016692867
VERSION     XP_016692867.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837378.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692867.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..802
                     /product="oxysterol-binding protein-related protein 1D"
                     /calculated_mol_wt=91351
     Region          87..221
                     /region_name="PH_ORP_plant"
                     /note="Plant Oxysterol binding protein related protein
                     Pleckstrin homology (PH) domain; cd13294"
                     /db_xref="CDD:241448"
     Region          420..774
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..802
                     /gene="LOC107909740"
                     /coded_by="XM_016837378.2:605..3013"
                     /db_xref="GeneID:107909740"
ORIGIN      
        1 mnplcciapv sidrdranpv vtksgpqcql siepsvrtvn yskpsfssqv ssvnadtdrs
       61 spsvmnhtsm aifdepiige vnaahgvagi lykwvnygkg wrsrwfvled gvlsyykihg
      121 pdkilmspsr eksvrviged svrymrkanw ssnrvnsvtt qckpfgeihl kvssirasks
      181 ddkrltiftg tktlhlrcvs redrtawiea llaakdlfpr vlssndfqps edvvistdkl
      241 rsrllqegig eavikdcesi mllelsemqn qlkalqrkhi klldtlrqle teklelettv
      301 vdetkerksy cgrfsdfysv msegsatdsd adnesqdgad vetdeddgiy fdtndflsse
      361 alrsasyrcr esgsgcvfdk dasfsdcvwg pekeiriiqy pyvkrrdnlp epkekekpvg
      421 lwsiikdnig kdlsgvclpv yfneplsslq kcfedleysy lvdralewgk qendlmriln
      481 vaafavsgya stegrqckpf npllgetyea dypdkglrff sekvshhpmi vachcegrgw
      541 kfwadsnlkg kfwgrsiqld pvgiltlqfe dgetfqwskv ttsiyniilg kiycdhygtm
      601 rikgsgnysc klkfkeqsii drnphqvhgf vqdnrtgekv amlvgkwdea myyvlgdptm
      661 kpkgydpmte avllwerdks atktrynltp faislneltp dlleklpptd srlrpdqrhl
      721 engeyemana eklrleqlqr qarklqergw qprwfnkded gcyryiggyw earekrkwdg
      781 ipdifgqcsg sshnspscli ee
//
LOCUS       XP_016692868             680 aa            linear   PLN 06-AUG-2024
DEFINITION  protein terminal ear1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692868
VERSION     XP_016692868.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837379.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692868.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..680
                     /product="protein terminal ear1 isoform X1"
                     /calculated_mol_wt=75955
     Region          100..167
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          220..290
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          457..558
                     /region_name="RRM3_EAR1_like"
                     /note="RNA recognition motif 3 (RRM3) found in terminal
                     EAR1-like proteins; cd12530"
                     /db_xref="CDD:240974"
     CDS             1..680
                     /gene="LOC107909741"
                     /coded_by="XM_016837379.2:292..2334"
                     /db_xref="GeneID:107909741"
ORIGIN      
        1 mgetgtvrfp gnldpsaqef wpaqnvvcqp qfplyrppql yypyaasptv pfcsggvpqf
       61 haalplhapv avpaptpfvt tasmvvapql plppptaaas ralvltlvpc dvseskvrke
      121 levfgevrgv qmervregiv tvhfydvrya ekalkeireq hmqeqarvrd qytaaatgce
      181 pgvsnacvpl psargliagr pvwahftipa snavpegnnq gtvvvfnldt avsisqlkdi
      241 fqaygpvkel retplkkhqk fvefydvrda akalremngk eingkqvvie fsrpggysrk
      301 ffnsdnnvnk inaftaftdk ynphtrnpky sssppppppl prkfsarfss ndiprsflpr
      361 nqsptvkpln sskgnpnmnn dskcsvveta vvedkvgssg gpkktvkknq snsstvakhn
      421 qqlcrgrpwk grqskkfdpr flisedamvg sdskdsrttv miknipnkys qklllnmldn
      481 hcihcneqia edddqplssy dfvylpidfn nkcnvgygfv nmtspqatwr lykafhhqhw
      541 evfnsrkice vtyarvqgle alkehfrnsk fpcemehylp vvfspprdgk qlteplpivg
      601 qkqqspnsgp sakdneeded dydhydhsgd escnenplad ddntansaqe ennvnsishl
      661 kywdsddtdd qhdefpqqsl
//
LOCUS       XP_040944835             534 aa            linear   PLN 06-AUG-2024
DEFINITION  protein terminal ear1 homolog isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944835
VERSION     XP_040944835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088901.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="protein terminal ear1 homolog isoform X2"
                     /calculated_mol_wt=59475
     Region          100..167
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          220..>244
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          311..412
                     /region_name="RRM3_EAR1_like"
                     /note="RNA recognition motif 3 (RRM3) found in terminal
                     EAR1-like proteins; cd12530"
                     /db_xref="CDD:240974"
     CDS             1..534
                     /gene="LOC107909741"
                     /coded_by="XM_041088901.1:299..1903"
                     /db_xref="GeneID:107909741"
ORIGIN      
        1 mgetgtvrfp gnldpsaqef wpaqnvvcqp qfplyrppql yypyaasptv pfcsggvpqf
       61 haalplhapv avpaptpfvt tasmvvapql plppptaaas ralvltlvpc dvseskvrke
      121 levfgevrgv qmervregiv tvhfydvrya ekalkeireq hmqeqarvrd qytaaatgce
      181 pgvsnacvpl psargliagr pvwahftipa snavpegnnq gtvvvfnldt avsisqlkdi
      241 fqayvvedkv gssggpkktv kknqsnsstv akhnqqlcrg rpwkgrqskk fdprflised
      301 amvgsdskds rttvmiknip nkysqkllln mldnhcihcn eqiaedddqp lssydfvylp
      361 idfnnkcnvg ygfvnmtspq atwrlykafh hqhwevfnsr kicevtyarv qglealkehf
      421 rnskfpceme hylpvvfspp rdgkqltepl pivgqkqqsp nsgpsakdne ededdydhyd
      481 hsgdescnen pladddntan saqeennvns ishlkywdsd dtddqhdefp qqsl
//
LOCUS       XP_016692869             449 aa            linear   PLN 06-AUG-2024
DEFINITION  protein JINGUBANG [Gossypium hirsutum].
ACCESSION   XP_016692869
VERSION     XP_016692869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837380.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..449
                     /product="protein JINGUBANG"
                     /calculated_mol_wt=49328
     Region          103..422
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          107..140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(118,122,127..128,140..141,160,164,170..171,183,214,
                     229,234,240..241,254,270,275,281..282,298..299,317,321,
                     327..328,344..345,360,365,371,373,387..388,411,415,
                     421..422)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          148..182
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..253
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          259..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          303..339
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          347..386
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          392..431
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..449
                     /gene="LOC107909742"
                     /coded_by="XM_016837380.2:69..1418"
                     /db_xref="GeneID:107909742"
ORIGIN      
        1 mkvrswlatc atsscatltq dstipfpkkq prlsehlvsd sfsdnrgsat sssasssdts
       61 ysslpsnlsl qtlpsvpslq lfpdtlvfsv sdisvssimp qpnhpitcva vqgnflyvas
      121 vneisvydrq tstlldayng nesssgsvks vtfcdgkvft ahqdskirvw qmtvtkkhkf
      181 ltalptvndr lrrlvlpkny vnvrrhvkrl wiehadavtg lavnrgliys vswdktlkiw
      241 rasdarclqs ikahddaina itasfdgtvy tgsadrrirv wakpsgekry alvatlekhk
      301 savnalaldd ersvlfsgac drsilvwere dsanymvvtg alrghgkail clinvcdllm
      361 sgsadrtvri wqrgvegkyc clavleghqk pvksltavrd dehsdvvsvi sgsldgeirm
      421 wkvsfskpgi prrrriseng icekkgies
//
LOCUS       XP_016692870             705 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SIEVE ELEMENT OCCLUSION B [Gossypium hirsutum].
ACCESSION   XP_016692870
VERSION     XP_016692870.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837381.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..705
                     /product="protein SIEVE ELEMENT OCCLUSION B"
                     /calculated_mol_wt=79862
     Region          23..304
                     /region_name="SEO_N"
                     /note="Sieve element occlusion N-terminus; pfam14576"
                     /db_xref="CDD:464212"
     Region          <360..466
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          469..704
                     /region_name="SEO_C"
                     /note="Sieve element occlusion C-terminus; pfam14577"
                     /db_xref="CDD:405292"
     CDS             1..705
                     /gene="LOC107909743"
                     /coded_by="XM_016837381.2:59..2176"
                     /db_xref="GeneID:107909743"
ORIGIN      
        1 melssgfygr snphmlstsg gkamgkliea thepagvein mkpvldived iferatpaap
       61 gaikqadase pderalhyss leqmmdvlsa tinrisceit yrlsigedah sttlavaqiv
      121 kgyswdakiv lalaafamty gefllvvqly atnplakdva llkqlpeilt radllkpkfd
      181 tlanlinamv vvakctvefk glpskyirpe dpelssanad ipsavywtir stvicssqim
      241 glinmghefl ssttdawels slthninsiy ndlveklnrc rqrinerkdi eafetlvrlf
      301 davhidnmki lkaliyakdd qpplwdgttk qrvsiellrr ksvlllisdl qipekeliil
      361 eqiynesrvq ptriesqyev iwipivdrss tfddtmrkqf eslqammpwy svghpsmiqp
      421 avmryikevw gfnkkpllvv ldpqgrvvnp nampmmfiwg smafpftklr eealwkeetw
      481 riellaysid psiinwltdr kficlygged mnwirkfttt akavaktani elemlyvgks
      541 nprervrrnm tnielenlsh tlsdisliwf fwvrlesmwh sraqhgvtvr ndlimqeilt
      601 mlgfdgsdqg wavisrgade marakaetfl ksleeytawe aaaaekgfip alndhfrslr
      661 tehhcnrltl pgisvaeigs ikdtvvcvdc gkpmeallmf rcctd
//
LOCUS       XP_016692872             403 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SIEVE ELEMENT OCCLUSION C-like [Gossypium hirsutum].
ACCESSION   XP_016692872
VERSION     XP_016692872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837383.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..403
                     /product="protein SIEVE ELEMENT OCCLUSION C-like"
                     /calculated_mol_wt=46261
     Region          176..402
                     /region_name="SEO_C"
                     /note="Sieve element occlusion C-terminus; pfam14577"
                     /db_xref="CDD:405292"
     CDS             1..403
                     /gene="LOC107909744"
                     /coded_by="XM_016837383.2:155..1366"
                     /db_xref="GeneID:107909744"
ORIGIN      
        1 mhqkllslfk kshidnqnvl qmlfalkddl plkdcstqgk lgvsalkskv vllliskpdl
       61 lpfeqlfflv nqtydhphnd kiegsyaiiw vpisfyeawt daeqklfdfi snsmpcylvr
      121 qpwslnsavv nfmkqewnyg geaimvvlds egmitnlnal dmvfiwgska ypfslsrene
      181 lwdgeqwkmq litneihpil tqwveegrni ciygsenldw irefnakmkd ikdagmqhem
      241 iyvgknnpge htkeilsimn reihsnllsf tkiqlfwlrl esmrrsksrl gnnastdnvv
      301 aqisalldnn ndngwavygk glstdivrve gdeifrclnl frqwgknvgr lefidalrtv
      361 lepplvdgpc nhtqvvpyse glvqgnmvcq nckllmkklt iye
//
LOCUS       XP_016692873             276 aa            linear   PLN 06-AUG-2024
DEFINITION  protein SIEVE ELEMENT OCCLUSION C-like [Gossypium hirsutum].
ACCESSION   XP_016692873
VERSION     XP_016692873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837384.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="protein SIEVE ELEMENT OCCLUSION C-like"
                     /calculated_mol_wt=30940
     Region          18..244
                     /region_name="SEO_N"
                     /note="Sieve element occlusion N-terminus; pfam14576"
                     /db_xref="CDD:464212"
     CDS             1..276
                     /gene="LOC107909745"
                     /coded_by="XM_016837384.2:188..1018"
                     /db_xref="GeneID:107909745"
ORIGIN      
        1 mtsvqsgsfw qhsqsyldde ilikklllsh dpdrrrlnse mllsaveniv fhataseelv
       61 sdkpvnanfk gnisnielie speplmhtiy kiahemlcks pgeedlhtrt masldllgsh
      121 rwgakaalal aafaisygef slliqlrphi plavsianfk qipsnmsmlk pqvkalrsls
      181 ktmvdltkci iefealplvh vgpdmedlav mkpkiyvtay wiirstlvcs sqikslmamk
      241 peqvhvltch kskkmliffl hvpmiflhil rpntss
//
LOCUS       XP_016692848             525 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 86B1 [Gossypium hirsutum].
ACCESSION   XP_016692848
VERSION     XP_016692848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..525
                     /product="cytochrome P450 86B1"
                     /calculated_mol_wt=60303
     Region          81..513
                     /region_name="CYP86A"
                     /note="cytochrome P450 family 86, subfamily A; cd11064"
                     /db_xref="CDD:410687"
     Site            order(139,143,150,199,315..316,319..320,323..324,327,387,
                     396,398,422,460..462,466..470,473..474)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410687"
     Site            order(227..228,315,318..319,323,394..397)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410687"
     CDS             1..525
                     /gene="LOC107909728"
                     /coded_by="XM_016837359.2:199..1776"
                     /db_xref="GeneID:107909728"
ORIGIN      
        1 mramaemvsf svskwvisrl tfwdvsiall glfifsclhe sltrkgpmmw pvfgiipsiv
       61 fhlsdaynwg trvlikaggt fhyrgmwmgg aygivttdpy nieymlktnf qnfpkgnyyr
      121 erfrdllgdg ifnadneswm ekrqlakhem hssrfmehsf ktmqdlvhkk llillqklsi
      181 sgqcfdlqev llrltfdnic tvalgvnpgc laldlpdvpf akafeeatel tllrfltppf
      241 vwkplkffgl gnerrlkeai kvvhdfadkk vrdrrnilgn lsnqsdflsr liesenkqgq
      301 nrhfpgnflr dfcvsfilag rdttsvalaw ffwlihknpq venkilaeiy eilchpqcrt
      361 qddhitvfte dglkkmvylq aalseslrly psvpiemkqv leddvlpdgt rvkkgarvfn
      421 flfsmarmes iwgkdclefk perwikdgkf vsanqfkypv fnagprlclg knfsytqmkm
      481 vaasvllrys vkvveghsvv pkltttlymk sglvvtlkpr lvnna
//
LOCUS       XP_040944836             439 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RGLG2 [Gossypium hirsutum].
ACCESSION   XP_040944836
VERSION     XP_040944836.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088902.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..439
                     /product="E3 ubiquitin-protein ligase RGLG2"
                     /calculated_mol_wt=48704
     Region          79..329
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(114,204,232)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          394..439
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(396,399,410,412,415,418,425,428)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..439
                     /gene="LOC107908267"
                     /coded_by="XM_041088902.1:404..1723"
                     /db_xref="GeneID:107908267"
ORIGIN      
        1 mgskiskgcs rrrsrtsrsg gtdswspfgy ptppqsaypq qnyyytpqhp syapspsyny
       61 vpqtpgcvhr tmerkysrid dnyqtldqvt aalaqagles snlivgidft ksnewtgams
      121 fnhrslhhig hgqnpyeqai tiigrslsaf dednlipcyg fgdasthdqd vfsfypeeif
      181 cegfeevlar yreivpqlrl agptsfapii emamtiveqs ggqyhvllii adgqvtrsvd
      241 tqpgllspqe qntidaivka sefplsivlv gvgdgpwdmm refddnipar afdnfqfvnf
      301 teitsnimnp srkqaefals almeipsqyk atielgllgr rkgdttervp lpppiygtpn
      361 pysrtssfqq nvspysgyht satapslssl dnhqvcpicl vnpkdmafgc ghqtccdcge
      421 hlqlcpicrt tiqtrirly
//
LOCUS       XP_016690986             439 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RGLG2 [Gossypium hirsutum].
ACCESSION   XP_016690986
VERSION     XP_016690986.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835497.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..439
                     /product="E3 ubiquitin-protein ligase RGLG2"
                     /calculated_mol_wt=48704
     Region          79..329
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(114,204,232)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          394..439
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(396,399,410,412,415,418,425,428)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..439
                     /gene="LOC107908267"
                     /coded_by="XM_016835497.2:383..1702"
                     /db_xref="GeneID:107908267"
ORIGIN      
        1 mgskiskgcs rrrsrtsrsg gtdswspfgy ptppqsaypq qnyyytpqhp syapspsyny
       61 vpqtpgcvhr tmerkysrid dnyqtldqvt aalaqagles snlivgidft ksnewtgams
      121 fnhrslhhig hgqnpyeqai tiigrslsaf dednlipcyg fgdasthdqd vfsfypeeif
      181 cegfeevlar yreivpqlrl agptsfapii emamtiveqs ggqyhvllii adgqvtrsvd
      241 tqpgllspqe qntidaivka sefplsivlv gvgdgpwdmm refddnipar afdnfqfvnf
      301 teitsnimnp srkqaefals almeipsqyk atielgllgr rkgdttervp lpppiygtpn
      361 pysrtssfqq nvspysgyht satapslssl dnhqvcpicl vnpkdmafgc ghqtccdcge
      421 hlqlcpicrt tiqtrirly
//
LOCUS       XP_016692847             691 aa            linear   PLN 06-AUG-2024
DEFINITION  paramyosin [Gossypium hirsutum].
ACCESSION   XP_016692847
VERSION     XP_016692847.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837358.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692847.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..691
                     /product="paramyosin"
                     /calculated_mol_wt=78315
     Region          <37..>586
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <472..>648
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..691
                     /gene="LOC107909726"
                     /coded_by="XM_016837358.2:385..2460"
                     /db_xref="GeneID:107909726"
ORIGIN      
        1 mtsagdeevd avlsdvesde pvpivikdps redvsvekfr eilaeldrek qareaaensk
       61 selqvsfnrl kalaheaikk rdecgrqrde alrekeealr sndnltaqla eankikdevt
      121 kqredlakql eeaskgkdgl rseietsahm lvsgiekisg kvnnfknfsa gglprsqkyt
      181 glpsvaygvi krtneiveel vkqietttks rneareqieq rnyeiaievs qleatisglr
      241 devakktnii enlekniaek dgkigeieke msekinlaed elmelrnlss eyddklkiwq
      301 mrmelqrqll vdqlnfvsri heiiydviki vdadnmdqsd vsesfflpqe tdseenirac
      361 lagmesiyel tgilavktkd lveeknrevk slnetvarli kekehigsll rsalsrrmvs
      421 enksktnelf qtaenglrea gidfkfsnli gdgnkaedpg sdqdeiytla galenivkts
      481 qleiielqhs veelraessv lkehveaqak elnqrmhrie eleekervan esveglmmdi
      541 aaaeeeitrw ksaaeqeaaa graveqefla qlsavklele eakqamlese kklkfkeeta
      601 aaamaardaa ekslkladmr asrlrervee ltfqleefet redsrgrngp ryvcwpwqwl
      661 gldfvgfhkp etqqqssnem elseplsepl l
//
LOCUS       XP_016692845             691 aa            linear   PLN 06-AUG-2024
DEFINITION  paramyosin [Gossypium hirsutum].
ACCESSION   XP_016692845
VERSION     XP_016692845.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837356.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692845.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..691
                     /product="paramyosin"
                     /calculated_mol_wt=78315
     Region          <37..>586
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <472..>648
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..691
                     /gene="LOC107909726"
                     /coded_by="XM_016837356.2:192..2267"
                     /db_xref="GeneID:107909726"
ORIGIN      
        1 mtsagdeevd avlsdvesde pvpivikdps redvsvekfr eilaeldrek qareaaensk
       61 selqvsfnrl kalaheaikk rdecgrqrde alrekeealr sndnltaqla eankikdevt
      121 kqredlakql eeaskgkdgl rseietsahm lvsgiekisg kvnnfknfsa gglprsqkyt
      181 glpsvaygvi krtneiveel vkqietttks rneareqieq rnyeiaievs qleatisglr
      241 devakktnii enlekniaek dgkigeieke msekinlaed elmelrnlss eyddklkiwq
      301 mrmelqrqll vdqlnfvsri heiiydviki vdadnmdqsd vsesfflpqe tdseenirac
      361 lagmesiyel tgilavktkd lveeknrevk slnetvarli kekehigsll rsalsrrmvs
      421 enksktnelf qtaenglrea gidfkfsnli gdgnkaedpg sdqdeiytla galenivkts
      481 qleiielqhs veelraessv lkehveaqak elnqrmhrie eleekervan esveglmmdi
      541 aaaeeeitrw ksaaeqeaaa graveqefla qlsavklele eakqamlese kklkfkeeta
      601 aaamaardaa ekslkladmr asrlrervee ltfqleefet redsrgrngp ryvcwpwqwl
      661 gldfvgfhkp etqqqssnem elseplsepl l
//
LOCUS       XP_016690674             415 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome P450 71B36 [Gossypium hirsutum].
ACCESSION   XP_016690674
VERSION     XP_016690674.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835185.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..415
                     /product="cytochrome P450 71B36"
                     /calculated_mol_wt=47240
     Region          1..406
                     /region_name="CYP71-like"
                     /note="cytochrome P450 family 71 and similar cytochrome
                     P450s; cd11072"
                     /db_xref="CDD:410695"
     Site            order(12,37,41,49,96,214,217..218,221..222,281,285..286,
                     288,348..351,354..358,361..362)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410695"
     Site            order(122,126,152,213,216..217,286)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410695"
     CDS             1..415
                     /gene="LOC107907874"
                     /coded_by="XM_016835185.2:1..1248"
                     /db_xref="GeneID:107907874"
ORIGIN      
        1 mlrihdlecc nrppltgpkr ltynfqdvaf apyghywkem rkicvaelfs mkrvqsfqsv
       61 reeevdllie svsgsatlan pidlskcsfs ltasiifriv fskqfqgsel dndklqklvf
      121 eaeamlgsfc nsdflpyvgk viewftgfht rlgssfheld sffqrviedh ldsgptkdde
      181 edivdvllrm ekdqtqndai qltkdhikai lkdifiagid tpainmiwav aelarkptam
      241 kkaqneirsc vgkkgklten dvskltylnm viketlrlhp pgvlllpret msqikigdyd
      301 inpktriavn vwaigrdpdi wdnpkefipe rfidnpidlk gqhfellpfg ggrricpgin
      361 mgmtvlelal anllyffdwk lpigmreidi dmeekvsltv gkktslmlip ikynm
//
LOCUS       XP_040944837             375 aa            linear   PLN 06-AUG-2024
DEFINITION  NDR1/HIN1-like protein 6 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944837
VERSION     XP_040944837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088903.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..375
                     /product="NDR1/HIN1-like protein 6 isoform X1"
                     /calculated_mol_wt=43293
     Region          <51..>190
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..375
                     /gene="LOC107909723"
                     /coded_by="XM_041088903.1:1390..2517"
                     /db_xref="GeneID:107909723"
ORIGIN      
        1 mahhhpetnp hfvdpeelte eqrqylpstl lprrdhahrm psrgrharqp qprqsqeehp
       61 rplgpsplqp phegqphlpl hvwvppvhhe dqsqpqsqpr qgqqrqplem wvpptsktqv
      121 papkkeksrp rkevgmqpql qdqhpeaslv rpqpehhpsp vtmtplhhdr qpqelrphsr
      181 llpqdrrtkp qtwfgavfci ifwlviiigg iivlivylvf rprsphfdvi svtwnaayld
      241 mgyllnadlt vlanftnpnk kvsvdfsyly ldlyfentli atqyiepfsa trgqsifani
      301 hmvssqvkls mkesmllqkq iqnnrviftv kgmfrarsnl gsflkysywl hgqcgimlss
      361 pptgvlrdkk cktkh
//
LOCUS       XP_016692843             336 aa            linear   PLN 06-AUG-2024
DEFINITION  NDR1/HIN1-like protein 6 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692843
VERSION     XP_016692843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837354.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..336
                     /product="NDR1/HIN1-like protein 6 isoform X2"
                     /calculated_mol_wt=38588
     Region          <12..>151
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..336
                     /gene="LOC107909723"
                     /coded_by="XM_016837354.2:447..1457"
                     /db_xref="GeneID:107909723"
ORIGIN      
        1 mpsrgrharq pqprqsqeeh prplgpsplq pphegqphlp lhvwvppvhh edqsqpqsqp
       61 rqgqqrqple mwvpptsktq vpapkkeksr prkevgmqpq lqdqhpeasl vrpqpehhps
      121 pvtmtplhhd rqpqelrphs rllpqdrrtk pqtwfgavfc iifwlviiig giivlivylv
      181 frprsphfdv isvtwnaayl dmgyllnadl tvlanftnpn kkvsvdfsyl yldlyfentl
      241 iatqyiepfs atrgqsifan ihmvssqvkl smkesmllqk qiqnnrvift vkgmfrarsn
      301 lgsflkysyw lhgqcgimls spptgvlrdk kcktkh
//
LOCUS       XP_016692841             104 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692841
VERSION     XP_016692841.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837352.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..104
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11876
     Region          <1..>103
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
     CDS             1..104
                     /gene="LOC107909720"
                     /coded_by="XM_016837352.2:146..460"
                     /db_xref="GeneID:107909720"
ORIGIN      
        1 maacdfnmcf iftfpgwegt ahdsriflqa lrkqelkfph pppgkyylvd sgypqmagfl
       61 gpyrgeryhl pdfrrgnhqv sgkkeifnha hsslrsvier tfgv
//
LOCUS       XP_016692839             834 aa            linear   PLN 06-AUG-2024
DEFINITION  protein-tyrosine-phosphatase MKP1 [Gossypium hirsutum].
ACCESSION   XP_016692839
VERSION     XP_016692839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837350.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..834
                     /product="protein-tyrosine-phosphatase MKP1"
                     /calculated_mol_wt=91679
     Region          109..243
                     /region_name="DSP"
                     /note="dual-specificity phosphatase domain; cd14498"
                     /db_xref="CDD:350348"
     Region          <288..351
                     /region_name="GEL"
                     /note="Gelsolin homology domain; smart00262"
                     /db_xref="CDD:214590"
     Region          <736..827
                     /region_name="ADF_gelsolin"
                     /note="Actin depolymerization factor/cofilin- and
                     gelsolin-like domains; cl15697"
                     /db_xref="CDD:472830"
     CDS             1..834
                     /gene="LOC107909718"
                     /coded_by="XM_016837350.2:710..3214"
                     /db_xref="GeneID:107909718"
ORIGIN      
        1 mfgqeenrla gtaadaarqp ylrsiswtdr sptkpnpkpp tntkgrsclp plcikrrpve
       61 ewpnagsddl gvwphpqtpr gsvkplpspg snrefqlrkd klafydkecs riadhiylgs
      121 davaknreil akngithvln cvgfvcpeyf kndlvyktlw lqdnpsedit silydvfdyf
      181 edvreqggrv lvhccqgvsr stslviaylm wrevqsfeda fqyvktargv tnpntgfafq
      241 llqcqkrvha apaspnsllr mykmaphssy dalhlvpkll nhpgiqglds rgafivhvps
      301 aiyvwvgkkc snimsnrasl aanqviryer aqgpiitvre geepvkfwda laigqvsaaa
      361 eatnicvger kvgdydldfe lfhkalaggv vppfsvsaae setclparen gwgrlrqkfa
      421 ngimkefvns sklgcnltpg tdrsimivdd trrdseaedn vslsspssps iipcgspdsf
      481 dcfpdtspir skgpcedveq lvtpcdspla rrspcgspss fssfaasspk fssksptlsp
      541 stsdygssfa fspsssnwsd fsymssrqps psgleaidiy sclqsketsl spqktfssdh
      601 tlsvaitgsp ckgtspslae rrgshppprm vlpsvdeqvp rnlvrswsfs mpelddddvm
      661 ndvdcnqyep eddseeltld aevvavsiks hgrtenqsey gechaqsgai fenprgittm
      721 alyqwptlsk vemrgshhil esgaaymlla pdasdcsgvl yiwlgrevmc gkgqsrsess
      781 ggtnkdshlh wesigrefln kmdlplnasv qvvtegeepe qfwklfncyt dpkg
//
LOCUS       XP_016692840             638 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692840
VERSION     XP_016692840.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837351.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..638
                     /product="uncharacterized protein"
                     /calculated_mol_wt=71709
     Region          5..637
                     /region_name="PLN02899"
                     /note="alpha-galactosidase"
                     /db_xref="CDD:178487"
     CDS             1..638
                     /gene="LOC107909719"
                     /coded_by="XM_016837351.2:125..2041"
                     /db_xref="GeneID:107909719"
ORIGIN      
        1 mrlsvlgffc fffapslcrv psethvktep ehastpprgw nsydsfcwti seeeflqnae
       61 ivsnrlkphg yeyvvvdylw yrrkvegayt dslgfdvide wgrpipdpgr wpsskggkgf
      121 sevakkvhgm glklgihvmr gislqsfnan tpildtvkgs ayvdfgrqwr akdigvkera
      181 cawmshgfms vntkleagra flrslylqya ewgvdfvkhd cvfgddldve eitfvsevlr
      241 kldrpiiysl spgtsvtpam akevsglvnm yritgddwdt wrdvlshfdi trdfstakmi
      301 gakgllgrsw pdldmlplgw ltdpgsnegp hrtsnlnlde qrtqitlwam aksplmfggd
      361 vrkldettyn litnptllei nsfslnnmef pyitsrrrcr skekvlsqdl aeggmlgira
      421 lglitckdak angwstkald qdleqicwke kpeskfeepp clykrkplva sgvemiykkq
      481 yegtlhlles dgmelcldas prrrltskef gggsfspckw danqmwelng tgslvnsysg
      541 lcatmdllkv dagsneirsw iatgrrgeiy laifnlnpkk tvistniadi gkvfpwknmk
      601 gasckyheiw sgksgvtkqm isiavekhgc slfvltcd
//
LOCUS       XP_016692834             529 aa            linear   PLN 06-AUG-2024
DEFINITION  eukaryotic translation initiation factor 4B2 [Gossypium hirsutum].
ACCESSION   XP_016692834
VERSION     XP_016692834.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837345.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..529
                     /product="eukaryotic translation initiation factor 4B2"
                     /calculated_mol_wt=58064
     Region          1..498
                     /region_name="eIF-4B"
                     /note="Plant specific eukaryotic initiation factor 4B;
                     pfam06273"
                     /db_xref="CDD:310698"
     CDS             1..529
                     /gene="LOC107909714"
                     /coded_by="XM_016837345.2:282..1871"
                     /db_xref="GeneID:107909714"
ORIGIN      
        1 mskpwggvga waaeaereea eereaaeaaa agptaesrsf pslkeavsak rkskkmtlse
       61 ftmgtysssa gagvgggarv tdynkltpee mmllptrpke rtpeemqygr lgggfssygr
      121 sgpsagrgmr erdgsdgswg sgrrqyggfd eerrgppsrv sdfdqpsrad evdnwaiakk
      181 ttpsfdsgrp nrygglgsgg gggnskadev dnwtaekrpi parpssfgsg frdsgpepdr
      241 wtrggggsgf reerprivld pprgevnetv vktnksnpfg aarpreevla ekgldwkkld
      301 seieakkvts rptsshssrp ssaqssrseg pqlqgienvl kpkpkvnpfg dakprevlle
      361 ergqdwrkid lelerrrmdr peteeekilk eeidnlkkel ekdstpases aldqsalrdt
      421 llhkerelek lirglenkvk fgqkaverpg sgsgriggsy sdrppsqsgs sdssrnmefm
      481 drprsrgtvd gwtrpaddrr gfqggfqggr drgypgnrnv drprsrerw
//
LOCUS       XP_016692835             408 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g14450 [Gossypium hirsutum].
ACCESSION   XP_016692835
VERSION     XP_016692835.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837346.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..408
                     /product="GDSL esterase/lipase At5g14450"
                     /calculated_mol_wt=45295
     Region          60..389
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(68,138,206,370,373)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(68,370,373)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(68,138,206)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..408
                     /gene="LOC107909715"
                     /coded_by="XM_016837346.2:1..1227"
                     /db_xref="GeneID:107909715"
ORIGIN      
        1 megqrpsvgn giigrwktaw asrnsvktft iaaffavafs lfilsgrqrn lggsgtcdfp
       61 avfnfgdsns dtggksaafh riplpngntf fqkpsgrywn geliidfiae klglphlsay
      121 ldsigtnfrh ganfatggst iqrldarmfk igyspisldi qlsqfeqfke rinelykegv
      181 nsniksklpr pedfsqalyt fdigqndldc afksmtekqa iesvpgiinq faqavkrlhn
      241 qgartfwihn tgpigclpfe vldypqqhen vdqngclrsl neiahefnrq lkdsviqlrl
      301 qfpdaaltyv diysakysli shakhhgfan plgyccghhr dnlcwrkkts ngteisatpc
      361 snpsayiswd gihyshaanl wvankvldgl vsdpptpite achrslnl
//
LOCUS       XP_016692837             387 aa            linear   PLN 06-AUG-2024
DEFINITION  alpha-L-fucosidase 3 [Gossypium hirsutum].
ACCESSION   XP_016692837
VERSION     XP_016692837.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837348.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..387
                     /product="alpha-L-fucosidase 3"
                     /calculated_mol_wt=42739
     Region          36..372
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(44,114,180,352,355)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(44,352,355)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(44,114,180)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..387
                     /gene="LOC107909716"
                     /coded_by="XM_016837348.2:215..1378"
                     /db_xref="GeneID:107909716"
ORIGIN      
        1 mafglssifv itifaisftn lasvslvlar kpcrfpaifn fgdsnsdtgg lsaafgqapp
       61 pngfsyfgap agrytdgrll idfiaeslgl pylsafldsv gtnfshganf atagstirpq
      121 nttlqqsgfs pislnvqfye fndfhartqv vrkrggvfei lmpkkehfsn alytfdigqn
      181 dltagyfsnm stddvktyvp dvlnqfqtii qyiynqggry fwihntgpvg clpyvmerip
      241 vlagqiddyg caspfnevaq ffnrglkkiv eqlrknlpha aityvdvysv kyslisqgrk
      301 hgfkhplrtc cghggkynyn knlgcgakvn khgkevlvga pckdpwtyvn wdgvhfteaa
      361 nkyiferivd gslsdpptpl nmacyrn
//
LOCUS       XP_016692838             385 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g14450 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692838
VERSION     XP_016692838.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837349.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="GDSL esterase/lipase At5g14450 isoform X1"
                     /calculated_mol_wt=42038
     Region          43..372
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(51,121,189,352,355)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(51,352,355)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(51,121,189)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..385
                     /gene="LOC107909717"
                     /coded_by="XM_016837349.2:1..1158"
                     /db_xref="GeneID:107909717"
ORIGIN      
        1 mngvidfrgs lgsisskktv mavaislllv asllgsscgc hfpaiynwgd snsdtgsvsa
       61 afgrvpwpcg esffgkpagr ysdgrliidf ianelklpfl sayldaidsn frhganfaas
      121 gstiqpaddk lfdtgfnpls ldiqllqfqq lkertnelyd qaknpditdr lprpeefsks
      181 lyildcgqnd lhygiitsie dqfkafipni ikqfaaavek lfqqgarvfw ihntgpigcl
      241 ptviinfppk pgnvdqagci ksynelaqef nkqlkdtvsq lkaklpgarl iyvdiysakf
      301 sliseankyg fvdpfvnccg dhhvecgkta vvngteifga scsdpskhis wdgihyteaa
      361 nywvvnrild gslsdpplpi tkacl
//
LOCUS       XP_040944839             365 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At5g14450 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944839
VERSION     XP_040944839.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088905.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..365
                     /product="GDSL esterase/lipase At5g14450 isoform X2"
                     /calculated_mol_wt=39960
     Region          23..352
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(31,101,169,332,335)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(31,332,335)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(31,101,169)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..365
                     /gene="LOC107909717"
                     /coded_by="XM_041088905.1:779..1876"
                     /db_xref="GeneID:107909717"
ORIGIN      
        1 mavaislllv asllgsscgc hfpaiynwgd snsdtgsvsa afgrvpwpcg esffgkpagr
       61 ysdgrliidf ianelklpfl sayldaidsn frhganfaas gstiqpaddk lfdtgfnpls
      121 ldiqllqfqq lkertnelyd qaknpditdr lprpeefsks lyildcgqnd lhygiitsie
      181 dqfkafipni ikqfaaavek lfqqgarvfw ihntgpigcl ptviinfppk pgnvdqagci
      241 ksynelaqef nkqlkdtvsq lkaklpgarl iyvdiysakf sliseankyg fvdpfvnccg
      301 dhhvecgkta vvngteifga scsdpskhis wdgihyteaa nywvvnrild gslsdpplpi
      361 tkacl
//
LOCUS       XP_040944840             134 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit rpac1 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944840
VERSION     XP_040944840.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088906.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..134
                     /product="DNA-directed RNA polymerases I and III subunit
                     rpac1 isoform X1"
                     /calculated_mol_wt=15360
     Region          <78..>125
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..134
                     /gene="LOC107909713"
                     /coded_by="XM_041088906.1:156..560"
                     /db_xref="GeneID:107909713"
ORIGIN      
        1 maegageekk kfsiwdlpdv pmgqlpphle lqrsrvscnk dapihiesiq yfgayasmgi
       61 dnssrldrfs nnfrvevvrl neddmefdmi gsymvnwspk lqtavsdlte kaflkhpkvf
      121 lryirkcmkn semp
//
LOCUS       XP_040944841             115 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I and III subunit rpac1 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_040944841
VERSION     XP_040944841.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088907.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..115
                     /product="DNA-directed RNA polymerases I and III subunit
                     rpac1 isoform X2"
                     /calculated_mol_wt=13057
     Region          <78..>108
                     /region_name="PLN02943"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:215509"
     CDS             1..115
                     /gene="LOC107909713"
                     /coded_by="XM_041088907.1:156..503"
                     /db_xref="GeneID:107909713"
ORIGIN      
        1 maegageekk kfsiwdlpdv pmgqlpphle lqrsrvscnk dapihiesiq yfgayasmgi
       61 dnssrldrfs nnfrvevvrl neddmefdmi gsymvnwspk lqtavsdlws ktcri
//
LOCUS       XP_016692832             392 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At3g26430 [Gossypium hirsutum].
ACCESSION   XP_016692832
VERSION     XP_016692832.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837343.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="GDSL esterase/lipase At3g26430"
                     /calculated_mol_wt=42938
     Region          33..368
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(41,111,176,348,351)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(41,348,351)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(41,111,176)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..392
                     /gene="LOC107909712"
                     /coded_by="XM_016837343.2:158..1336"
                     /db_xref="GeneID:107909712"
ORIGIN      
        1 mephsfkkvv iglifsmtll pssssssapc nlpaifnfgd snsdtgglsa afgqtpapng
       61 etyfhapagr ycdgrllidf iaesfglpyl sayldsvgsn fshganfata gstirrqntt
      121 ifqsgaspis ldvqlvqfse fhtrskiisk qgvfhkllpk edyfskalyt fdigqndlta
      181 gyklnltteq vkayvpdvll qlseavkrvy dqggrtfwih ntgpvgclpy vldrfftsat
      241 qldkygcgsp fnevaqyfnq rlkdvviqlr kqlplaaity vdvysvkytl vsqakklgfe
      301 lpliaccghg gkynfnnslr cggkittkgk eiliakscgn psvrvnwdgi hfteaankwi
      361 fqqitsgsfs dpplplkmac hlskdgamnk fr
//
LOCUS       XP_016692831             633 aa            linear   PLN 06-AUG-2024
DEFINITION  chloroplast sensor kinase, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016692831
VERSION     XP_016692831.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837342.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692831.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..633
                     /product="chloroplast sensor kinase, chloroplastic"
                     /calculated_mol_wt=69028
     Region          <457..618
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     CDS             1..633
                     /gene="LOC107909711"
                     /coded_by="XM_016837342.2:31..1932"
                     /db_xref="GeneID:107909711"
ORIGIN      
        1 maasvvppml lsaitsqlpl sppnsstnqt lpraplyhls ssslpkpplk hlnlnstslh
       61 hvsaptlsdd despqaqpam vssasaisaa irkastspvd ftqriekndh rnhklimptp
      121 dfqrlcleql dlfrrivdpd avlsvyvrpa gsyvmdqlel rrvtsypgve aadilflvgn
      181 ftvpaglraa eaalssqqme vvgehravvf pmvkqpfvvg flvaelpgme kvpqgsesgd
      241 mvrfptpeea yalsspspgl glkksweiqs leneamrqnd iftvdersna inisrtlava
      301 yvmdqkaill qqstwqnnvr mgalveqirg plssirtlsk mlsthvkehe ishdivedil
      361 vqgdcisgtl qelqdavylt kanimryneg slkkmrnsth shpeslrsql sddfsrdrsg
      421 nrsetsglll slsttdkdle mpmpplalap lqehgirksc nisdvltdlv daarplahkq
      481 qrmvelsels qplqvaieep alrqalsnli egallrtqvg gkveivstsa paggallvid
      541 ddgpdmhymt qmhsltpfga elfsenmied nmtwnfvagl tvareilesy gcvvrvispr
      601 ttdaalgagg trvelwlpsf aalsdinnls qea
//
LOCUS       XP_040944842             392 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944842
VERSION     XP_040944842.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088908.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45016
     Region          94..381
                     /region_name="DUF707"
                     /note="Protein of unknown function (DUF707); pfam05212"
                     /db_xref="CDD:461590"
     CDS             1..392
                     /gene="LOC107909709"
                     /coded_by="XM_041088908.1:500..1678"
                     /db_xref="GeneID:107909709"
ORIGIN      
        1 mgiftrstvs rkpnesmrli vttfvgvvfg fliglsfpkl sltkfnissg ilttidikyt
       61 eytnsvpsgs tplqhpidnn rssanatskk iwvpsnprga erlppgivka esdlylrrlw
      121 gkpnedltsp pkylvtftvg ynqrknidaa vkkfsgnfti llfhydgqtt ewdefewskq
      181 aihvsvrrqt kwwyakrflh pdivapydyi fiwdedlgve hfnaeeyikl vrkhgleisq
      241 pglepnkglt wqmtkrrgdr evhketeekp gwcnhphvpp caafveimap vfsrdawrcv
      301 whmiqndlvh gwgldfalrk cvepahekig vvdaqwivhq svpslgnqge sqngkapwqg
      361 vrerckkewt ifqtrfsrae rsyykainst sh
//
LOCUS       XP_040944843             392 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944843
VERSION     XP_040944843.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088909.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45016
     Region          94..381
                     /region_name="DUF707"
                     /note="Protein of unknown function (DUF707); pfam05212"
                     /db_xref="CDD:461590"
     CDS             1..392
                     /gene="LOC107909709"
                     /coded_by="XM_041088909.1:832..2010"
                     /db_xref="GeneID:107909709"
ORIGIN      
        1 mgiftrstvs rkpnesmrli vttfvgvvfg fliglsfpkl sltkfnissg ilttidikyt
       61 eytnsvpsgs tplqhpidnn rssanatskk iwvpsnprga erlppgivka esdlylrrlw
      121 gkpnedltsp pkylvtftvg ynqrknidaa vkkfsgnfti llfhydgqtt ewdefewskq
      181 aihvsvrrqt kwwyakrflh pdivapydyi fiwdedlgve hfnaeeyikl vrkhgleisq
      241 pglepnkglt wqmtkrrgdr evhketeekp gwcnhphvpp caafveimap vfsrdawrcv
      301 whmiqndlvh gwgldfalrk cvepahekig vvdaqwivhq svpslgnqge sqngkapwqg
      361 vrerckkewt ifqtrfsrae rsyykainst sh
//
LOCUS       XP_040944844             392 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944844
VERSION     XP_040944844.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088910.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="uncharacterized protein"
                     /calculated_mol_wt=45016
     Region          94..381
                     /region_name="DUF707"
                     /note="Protein of unknown function (DUF707); pfam05212"
                     /db_xref="CDD:461590"
     CDS             1..392
                     /gene="LOC107909709"
                     /coded_by="XM_041088910.1:446..1624"
                     /db_xref="GeneID:107909709"
ORIGIN      
        1 mgiftrstvs rkpnesmrli vttfvgvvfg fliglsfpkl sltkfnissg ilttidikyt
       61 eytnsvpsgs tplqhpidnn rssanatskk iwvpsnprga erlppgivka esdlylrrlw
      121 gkpnedltsp pkylvtftvg ynqrknidaa vkkfsgnfti llfhydgqtt ewdefewskq
      181 aihvsvrrqt kwwyakrflh pdivapydyi fiwdedlgve hfnaeeyikl vrkhgleisq
      241 pglepnkglt wqmtkrrgdr evhketeekp gwcnhphvpp caafveimap vfsrdawrcv
      301 whmiqndlvh gwgldfalrk cvepahekig vvdaqwivhq svpslgnqge sqngkapwqg
      361 vrerckkewt ifqtrfsrae rsyykainst sh
//
LOCUS       XP_016692829             632 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At1g67900 [Gossypium hirsutum].
ACCESSION   XP_016692829
VERSION     XP_016692829.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837340.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..632
                     /product="BTB/POZ domain-containing protein At1g67900"
                     /calculated_mol_wt=70242
     Region          19..124
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          209..493
                     /region_name="NPH3"
                     /note="NPH3 family; pfam03000"
                     /db_xref="CDD:460777"
     CDS             1..632
                     /gene="LOC107909708"
                     /coded_by="XM_016837340.2:382..2280"
                     /db_xref="GeneID:107909708"
ORIGIN      
        1 mkfmklgsrp dtfytneavr svssevtsdl ivqvkgsryl lhkfpllskc lrlqricses
       61 petlqhqivq lpdfpggtea felcakfcyg ititfsayni vaarcaaeyl qmtedvekgn
      121 lvyklevffn scilhgwrds ivtlhttkaf plwsedlrit srcieaiask asthpfkvsl
      181 shshsrrvrd dvscngvegq rqrpaakgww aediaelgid lywrtmiaik sdgkipsnli
      241 gealqiyasr wlpnisrrik anrepagsns dsdsasevts ksrlllesiv sllpsekgav
      301 scsfllkllk aanilnvsss skmelarrva lqveearvgd llipslssss ntlydvdivl
      361 iileqfmlqg qspptspprs klgterrrrs rsaenidfkl qesrrsssas hssklkvaki
      421 vdgylrqiak dinlplskfi avaetipdfs rldhdelyra idiylkahpd lnkserkklc
      481 rvldckklsv eacmhaaqne klplrvvvqv lffeqaraat tggkgtdlps nikallashn
      541 inpskppral stttsipghd qwstvsglrs pksristlrm klaedddlde ndmnpdgmgr
      601 pskfkgfcal ptgpkkmfsr llstnrnate ks
//
LOCUS       XP_016692827             103 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692827
VERSION     XP_016692827.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837338.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..103
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10776
     CDS             1..103
                     /gene="LOC107909707"
                     /coded_by="XM_016837338.2:185..496"
                     /db_xref="GeneID:107909707"
ORIGIN      
        1 mesetmskkn lkveipskte titastvesh aagpasgqgq gapglsrqps vtktnclcsp
       61 tthpgsfrcr vhrapslqrt ksiesqsatl qdhtskpdsd tae
//
LOCUS       XP_016692828             103 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692828
VERSION     XP_016692828.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837339.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..103
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10776
     CDS             1..103
                     /gene="LOC107909707"
                     /coded_by="XM_016837339.2:337..648"
                     /db_xref="GeneID:107909707"
ORIGIN      
        1 mesetmskkn lkveipskte titastvesh aagpasgqgq gapglsrqps vtktnclcsp
       61 tthpgsfrcr vhrapslqrt ksiesqsatl qdhtskpdsd tae
//
LOCUS       XP_016692826             462 aa            linear   PLN 06-AUG-2024
DEFINITION  plant intracellular Ras-group-related LRR protein 3 [Gossypium
            hirsutum].
ACCESSION   XP_016692826
VERSION     XP_016692826.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837337.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="plant intracellular Ras-group-related LRR
                     protein 3"
                     /calculated_mol_wt=51550
     Region          <19..>243
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          157..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <169..>377
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          180..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          296..318
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          319..343
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          344..366
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..462
                     /gene="LOC107909706"
                     /coded_by="XM_016837337.2:316..1704"
                     /db_xref="GeneID:107909706"
ORIGIN      
        1 mdpnlskfpi lsyifsqqdp ynypslppqi rqdlltrfph lpdpsilasl srsiptsvtq
       61 thsllrslgp rpdpsavsaa rskithiqet qsslqeadiy ktvlrleglh edyerqltev
      121 eenlgrlycs aveqmngdde vnedvvrilk eaengvverv elsgrqlrll peafgklygl
      181 vylnlsnnqi evipdsiggl kkleelnass nhlqhlpdsv glllnlrild vsgnklnalp
      241 esiarcsslv eldasfnnlt flpnnigygl lnleklsiql nkihflpssi cemrslryld
      301 ahfnelhglp qvigrmtkle vlnlssnfnd ftelpdtisd ltnlreldls nnqiralpct
      361 fgrlgklvkl nldqnplivp pieiankgad avkdymskkw ldiiteeqrr inleasnqqg
      421 qmgwlswgts lvsnaisgvs qsvgeylsgp kaprdpyldq ql
//
LOCUS       XP_040944845             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944845
VERSION     XP_040944845.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088911.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20329
     Region          11..106
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..186
                     /gene="LOC107909705"
                     /coded_by="XM_041088911.1:113..673"
                     /db_xref="GeneID:107909705"
ORIGIN      
        1 mvgtkitikf lcsyggkivp rypdgklryy ggetrvlavd rsipfsellv kmgemygsav
       61 slrcqlpted ldalvsitsd edlanlieey drvasppssi kiraflsplr stkkdvspps
      121 ssasssksss tstpryscir qisrtpvvyp lcseksagkm ipyygshghh gnpshiylih
      181 sgnhwq
//
LOCUS       XP_040944846             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944846
VERSION     XP_040944846.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088912.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20329
     Region          11..106
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..186
                     /gene="LOC107909705"
                     /coded_by="XM_041088912.1:113..673"
                     /db_xref="GeneID:107909705"
ORIGIN      
        1 mvgtkitikf lcsyggkivp rypdgklryy ggetrvlavd rsipfsellv kmgemygsav
       61 slrcqlpted ldalvsitsd edlanlieey drvasppssi kiraflsplr stkkdvspps
      121 ssasssksss tstpryscir qisrtpvvyp lcseksagkm ipyygshghh gnpshiylih
      181 sgnhwq
//
LOCUS       XP_040944847             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944847
VERSION     XP_040944847.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088913.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20329
     Region          11..106
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..186
                     /gene="LOC107909705"
                     /coded_by="XM_041088913.1:113..673"
                     /db_xref="GeneID:107909705"
ORIGIN      
        1 mvgtkitikf lcsyggkivp rypdgklryy ggetrvlavd rsipfsellv kmgemygsav
       61 slrcqlpted ldalvsitsd edlanlieey drvasppssi kiraflsplr stkkdvspps
      121 ssasssksss tstpryscir qisrtpvvyp lcseksagkm ipyygshghh gnpshiylih
      181 sgnhwq
//
LOCUS       XP_040944848             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944848
VERSION     XP_040944848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088914.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20329
     Region          11..106
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..186
                     /gene="LOC107909705"
                     /coded_by="XM_041088914.1:113..673"
                     /db_xref="GeneID:107909705"
ORIGIN      
        1 mvgtkitikf lcsyggkivp rypdgklryy ggetrvlavd rsipfsellv kmgemygsav
       61 slrcqlpted ldalvsitsd edlanlieey drvasppssi kiraflsplr stkkdvspps
      121 ssasssksss tstpryscir qisrtpvvyp lcseksagkm ipyygshghh gnpshiylih
      181 sgnhwq
//
LOCUS       XP_040944849             186 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944849
VERSION     XP_040944849.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088915.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..186
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20329
     Region          11..106
                     /region_name="PB1_UP2"
                     /note="Uncharacterized protein 2. The PB1 domain is a
                     modular domain mediating specific protein-protein
                     interaction which play a role in many critical cell
                     processes such as osteoclastogenesis, angiogenesis, early
                     cardiovascular development, and cell polarity; cd06410"
                     /db_xref="CDD:99731"
     CDS             1..186
                     /gene="LOC107909705"
                     /coded_by="XM_041088915.1:113..673"
                     /db_xref="GeneID:107909705"
ORIGIN      
        1 mvgtkitikf lcsyggkivp rypdgklryy ggetrvlavd rsipfsellv kmgemygsav
       61 slrcqlpted ldalvsitsd edlanlieey drvasppssi kiraflsplr stkkdvspps
      121 ssasssksss tstpryscir qisrtpvvyp lcseksagkm ipyygshghh gnpshiylih
      181 sgnhwq
//
LOCUS       XP_016692819             672 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-arabinofuranosyltransferase RAY1 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692819
VERSION     XP_016692819.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837330.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..672
                     /product="beta-arabinofuranosyltransferase RAY1 isoform
                     X1"
                     /calculated_mol_wt=75961
     Region          434..654
                     /region_name="Nucleotid_trans"
                     /note="Nucleotide-diphospho-sugar transferase; pfam03407"
                     /db_xref="CDD:367480"
     CDS             1..672
                     /gene="LOC107909702"
                     /coded_by="XM_016837330.2:159..2177"
                     /db_xref="GeneID:107909702"
ORIGIN      
        1 mkalliglws vwvsgvllia lslyatqrlp lsknrifshi sfsdldtpki tiftapapft
       61 gssrtkqsla irswlalspq isvilfsqhh saasfaksfg sralvesdid ftflgvpffh
      121 smvaksrafk sdiyvfmdte tillpdfvla lnyahnlddd wllfasprdv pnfpfylded
      181 rkhwlkdgqr iriqelqdtl gsswqwsccd srmviawnng vmplhhgvlp pflygkgvyn
      241 hwlinealss glrfvfdasw tisnialgds rrqsnrlvks snvsdiekgs weydcnshla
      301 avyglsslhg fnysavmklv kcdgqyllin atedflhtya ykkkslwkrh ipncwrsktt
      361 lacvvrtikt wnetsgcslk dgsvhtktlk lsfsleslla itadenktvv ltvagysykd
      421 mlmswvcrlr rlritnflvs sldyetyqfs vmqglpvfnd psapsnisfn dchfgtecfq
      481 rvtkvksrlv lkilklgynv llsdvdvywf knplpllssf gpatlaaqsd eynqtrpinl
      541 prrlnsgfyf ahsdaptisa mgkvvrhaat sglteqpsfy dtlcgewgst rkgdnrcvep
      601 gtnltvhfld rnlfpngayl glwerknvks ackkqgclvl hnnwisgrvk klerqvisgl
      661 wdydittrmc lv
//
LOCUS       XP_016692820             622 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-arabinofuranosyltransferase RAY1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692820
VERSION     XP_016692820.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837331.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..622
                     /product="beta-arabinofuranosyltransferase RAY1 isoform
                     X2"
                     /calculated_mol_wt=70459
     Region          384..604
                     /region_name="Nucleotid_trans"
                     /note="Nucleotide-diphospho-sugar transferase; pfam03407"
                     /db_xref="CDD:367480"
     CDS             1..622
                     /gene="LOC107909702"
                     /coded_by="XM_016837331.2:229..2097"
                     /db_xref="GeneID:107909702"
ORIGIN      
        1 mlrrapapft gssrtkqsla irswlalspq isvilfsqhh saasfaksfg sralvesdid
       61 ftflgvpffh smvaksrafk sdiyvfmdte tillpdfvla lnyahnlddd wllfasprdv
      121 pnfpfylded rkhwlkdgqr iriqelqdtl gsswqwsccd srmviawnng vmplhhgvlp
      181 pflygkgvyn hwlinealss glrfvfdasw tisnialgds rrqsnrlvks snvsdiekgs
      241 weydcnshla avyglsslhg fnysavmklv kcdgqyllin atedflhtya ykkkslwkrh
      301 ipncwrsktt lacvvrtikt wnetsgcslk dgsvhtktlk lsfsleslla itadenktvv
      361 ltvagysykd mlmswvcrlr rlritnflvs sldyetyqfs vmqglpvfnd psapsnisfn
      421 dchfgtecfq rvtkvksrlv lkilklgynv llsdvdvywf knplpllssf gpatlaaqsd
      481 eynqtrpinl prrlnsgfyf ahsdaptisa mgkvvrhaat sglteqpsfy dtlcgewgst
      541 rkgdnrcvep gtnltvhfld rnlfpngayl glwerknvks ackkqgclvl hnnwisgrvk
      601 klerqvisgl wdydittrmc lv
//
LOCUS       XP_040944850             622 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-arabinofuranosyltransferase RAY1 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944850
VERSION     XP_040944850.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088916.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..622
                     /product="beta-arabinofuranosyltransferase RAY1 isoform
                     X2"
                     /calculated_mol_wt=70459
     Region          384..604
                     /region_name="Nucleotid_trans"
                     /note="Nucleotide-diphospho-sugar transferase; pfam03407"
                     /db_xref="CDD:367480"
     CDS             1..622
                     /gene="LOC107909702"
                     /coded_by="XM_041088916.1:128..1996"
                     /db_xref="GeneID:107909702"
ORIGIN      
        1 mlrrapapft gssrtkqsla irswlalspq isvilfsqhh saasfaksfg sralvesdid
       61 ftflgvpffh smvaksrafk sdiyvfmdte tillpdfvla lnyahnlddd wllfasprdv
      121 pnfpfylded rkhwlkdgqr iriqelqdtl gsswqwsccd srmviawnng vmplhhgvlp
      181 pflygkgvyn hwlinealss glrfvfdasw tisnialgds rrqsnrlvks snvsdiekgs
      241 weydcnshla avyglsslhg fnysavmklv kcdgqyllin atedflhtya ykkkslwkrh
      301 ipncwrsktt lacvvrtikt wnetsgcslk dgsvhtktlk lsfsleslla itadenktvv
      361 ltvagysykd mlmswvcrlr rlritnflvs sldyetyqfs vmqglpvfnd psapsnisfn
      421 dchfgtecfq rvtkvksrlv lkilklgynv llsdvdvywf knplpllssf gpatlaaqsd
      481 eynqtrpinl prrlnsgfyf ahsdaptisa mgkvvrhaat sglteqpsfy dtlcgewgst
      541 rkgdnrcvep gtnltvhfld rnlfpngayl glwerknvks ackkqgclvl hnnwisgrvk
      601 klerqvisgl wdydittrmc lv
//
LOCUS       XP_016692821             616 aa            linear   PLN 06-AUG-2024
DEFINITION  beta-arabinofuranosyltransferase RAY1 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_016692821
VERSION     XP_016692821.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837332.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..616
                     /product="beta-arabinofuranosyltransferase RAY1 isoform
                     X3"
                     /calculated_mol_wt=69874
     Region          378..598
                     /region_name="Nucleotid_trans"
                     /note="Nucleotide-diphospho-sugar transferase; pfam03407"
                     /db_xref="CDD:367480"
     CDS             1..616
                     /gene="LOC107909702"
                     /coded_by="XM_016837332.2:229..2079"
                     /db_xref="GeneID:107909702"
ORIGIN      
        1 mlrrgssrtk qslairswla lspqisvilf sqhhsaasfa ksfgsralve sdidftflgv
       61 pffhsmvaks rafksdiyvf mdtetillpd fvlalnyahn ldddwllfas prdvpnfpfy
      121 ldedrkhwlk dgqririqel qdtlgsswqw sccdsrmvia wnngvmplhh gvlppflygk
      181 gvynhwline alssglrfvf daswtisnia lgdsrrqsnr lvkssnvsdi ekgsweydcn
      241 shlaavygls slhgfnysav mklvkcdgqy llinatedfl htyaykkksl wkrhipncwr
      301 skttlacvvr tiktwnetsg cslkdgsvht ktlklsfsle sllaitaden ktvvltvagy
      361 sykdmlmswv crlrrlritn flvssldyet yqfsvmqglp vfndpsapsn isfndchfgt
      421 ecfqrvtkvk srlvlkilkl gynvllsdvd vywfknplpl lssfgpatla aqsdeynqtr
      481 pinlprrlns gfyfahsdap tisamgkvvr haatsglteq psfydtlcge wgstrkgdnr
      541 cvepgtnltv hfldrnlfpn gaylglwerk nvksackkqg clvlhnnwis grvkklerqv
      601 isglwdydit trmclv
//
LOCUS       XP_016692824             585 aa            linear   PLN 06-AUG-2024
DEFINITION  inorganic phosphate transporter 2-1, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016692824
VERSION     XP_016692824.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837335.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..585
                     /product="inorganic phosphate transporter 2-1,
                     chloroplastic"
                     /calculated_mol_wt=61629
     Region          169..570
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     CDS             1..585
                     /gene="LOC107909704"
                     /coded_by="XM_016837335.2:289..2046"
                     /db_xref="GeneID:107909704"
ORIGIN      
        1 mtpfsclpca rsttspdafl lrnphlrlpk crhyehqlpk ienlmfrpfq vptrpylpil
       61 slrnsrrthp canissfaea eggkeqndea ihlgtrqeda kpneeylpgm aqafnissrt
      121 asaiaifiaf aaltlpffmk slgqgvgvkt kflsyatllf gfymawniga ndvanamgts
      181 vgsgaltlrq avvtaailef sgallmgthv tgtmqngilv anmfqgkdtl lfagllssla
      241 sagtwlqvas yygwpvstth civgsmvgfg layggagavf wtslarvass wvispvlgal
      301 vsflvykcir rfvysarnpg qaaaaaapva vflgvtgisf aafplsksfp ialaqalgcg
      361 avgavlvynl irkqlghlle ksasshsepq esntqtknlg llsdvagpkg tqleivygvf
      421 gymqvlsacf msfahggndv snaigplaga lsilqggass aeivipndvl awggfgivag
      481 lliwgyrvia tigkkitelt ptrgfaaefa aasvvlfask lalpisatht lvgavmgvgf
      541 arglnsvrae tvreivtswa vtipvgasla vlytwiltkl lsfil
//
LOCUS       XP_016692822             211 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692822
VERSION     XP_016692822.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837333.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..211
                     /product="uncharacterized protein"
                     /calculated_mol_wt=23780
     Region          42..208
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..211
                     /gene="LOC107909703"
                     /coded_by="XM_016837333.2:1..636"
                     /db_xref="GeneID:107909703"
ORIGIN      
        1 mlkncatfcg lvrhgnqdsg skkdaqgspm svdfsqsrdi svrivhaggq eelyqnvvpv
       61 shlmnkypgm ciarpevftn pdesllwped sllpgqkyyi ipsstveklk yrhrkklnfk
      121 qaaegredms daritwdisg enleesvnsa qefyvtkpsk vpkvpkervs khslrrsrrv
      181 kkpfvpplpr tglqresgwe psltsiqels p
//
LOCUS       XP_040944851             146 aa            linear   PLN 06-AUG-2024
DEFINITION  60S ribosomal protein L27a-3 [Gossypium hirsutum].
ACCESSION   XP_040944851
VERSION     XP_040944851.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088917.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..146
                     /product="60S ribosomal protein L27a-3"
                     /calculated_mol_wt=16331
     Region          1..146
                     /region_name="PTZ00160"
                     /note="60S ribosomal protein L27a; Provisional"
                     /db_xref="CDD:185489"
     CDS             1..146
                     /gene="LOC107909701"
                     /coded_by="XM_041088917.1:83..523"
                     /db_xref="GeneID:107909701"
ORIGIN      
        1 mttcfkknsk krghvsaghg rmgkhrkhpg grgnaggihy hrilfekyhp gyfrkvgmry
       61 fhklrnkfyc pivnidklws lvpqdvkaka nkdsapmidv aqfgyfkvlg kgvlpqnqpm
      121 vvkaklvskt aekkikeadg tvvlta
//
LOCUS       XP_040944852             146 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944852
VERSION     XP_040944852.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088918.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..146
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15961
     Region          1..>92
                     /region_name="Retrotran_gag_2"
                     /note="gag-polypeptide of LTR copia-type; pfam14223"
                     /db_xref="CDD:464108"
     CDS             1..146
                     /gene="LOC121214746"
                     /coded_by="XM_041088918.1:870..1310"
                     /db_xref="GeneID:121214746"
ORIGIN      
        1 mapsllhrdv kivndvwita trlfvavsga klsrihhdlh sikkgamsim eyvakiqntc
       61 alidaaksri feaekveivl aglpseydiv ltlasfssep lpfqclvdvf lefesqqvra
      121 vqeepvhahl vealsspvvv nsgrrg
//
LOCUS       XP_040944853             528 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 29 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944853
VERSION     XP_040944853.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088919.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..528
                     /product="protein DETOXIFICATION 29 isoform X1"
                     /calculated_mol_wt=57551
     Region          58..500
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(296,300,328,331,410,414,449,475,479)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..528
                     /gene="LOC107909698"
                     /coded_by="XM_041088919.1:188..1774"
                     /db_xref="GeneID:107909698"
ORIGIN      
        1 mamedaeqpl lsprlvgeds hhqeqllsrp snttftpgid dippingvrd ffreyliesk
       61 klwflagpai ftslcryslg aitqvfsgqv gtlalaavsv ensviagfsf gvmlgmgsal
      121 etlcgqafga gqvdmlgvym qrswvilnst almlsllyif aakflrvigq tesiskaagm
      181 faiwmlpqlf ayafnfpmak flqaqskimv maviagvalv lhtvlswllm lklgwglvga
      241 avvlnmswif ivvaqflyii sgacdrtwtg fsgkafqhlw gfvrlslasa vmlclevwyf
      301 malilfagyl tnaevsvdal sicmnilgwt imvamgmnaa isvrvsnelg aghprtakfs
      361 llvavsysfm igvtialili ifrnhypylf sndsqvqemv idltpllalc itinnvqpvl
      421 sgfkftydig mavgagwqta vayvnitcyy lfgvplgltl gfllhmgvkg iwcgmltgtv
      481 vqtcvllgmi yktnwnkeas magerikkwg gggdvdtket nmlknsnn
//
LOCUS       XP_016692814             520 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 29 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692814
VERSION     XP_016692814.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837325.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..520
                     /product="protein DETOXIFICATION 29 isoform X2"
                     /calculated_mol_wt=56579
     Region          58..492
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(296,300,328,331,410,414,441,467,471)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..520
                     /gene="LOC107909698"
                     /coded_by="XM_016837325.2:475..2037"
                     /db_xref="GeneID:107909698"
ORIGIN      
        1 mamedaeqpl lsprlvgeds hhqeqllsrp snttftpgid dippingvrd ffreyliesk
       61 klwflagpai ftslcryslg aitqvfsgqv gtlalaavsv ensviagfsf gvmlgmgsal
      121 etlcgqafga gqvdmlgvym qrswvilnst almlsllyif aakflrvigq tesiskaagm
      181 faiwmlpqlf ayafnfpmak flqaqskimv maviagvalv lhtvlswllm lklgwglvga
      241 avvlnmswif ivvaqflyii sgacdrtwtg fsgkafqhlw gfvrlslasa vmlclevwyf
      301 malilfagyl tnaevsvdal sicmnilgwt imvamgmnaa isvrvsnelg aghprtakfs
      361 llvavsysfm igvtialili ifrnhypylf sndsqvqemv idltpllalc itinnvqpvl
      421 sgmavgagwq tavayvnitc yylfgvplgl tlgfllhmgv kgiwcgmltg tvvqtcvllg
      481 miyktnwnke asmagerikk wggggdvdtk etnmlknsnn
//
LOCUS       XP_016692818             514 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 29 [Gossypium hirsutum].
ACCESSION   XP_016692818
VERSION     XP_016692818.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837329.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..514
                     /product="protein DETOXIFICATION 29"
                     /calculated_mol_wt=55932
     Region          52..486
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(290,294,322,325,404,408,435,461,465)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..514
                     /gene="LOC107909699"
                     /coded_by="XM_016837329.2:131..1675"
                     /db_xref="GeneID:107909699"
ORIGIN      
        1 megaeqpllf prldgeeeql lsrpsnitft pgtddippin svrdffreyl ieskklwfla
       61 gpaiftsvcq yslgaitqvf sgqvgtlala avsvensvia gfcfgvmlgm gsaletlcgq
      121 aygagqldml gvymqrswvi ltatalmlsl lyifagqllr vigqtesiae aagifaiwmi
      181 pqlfayafnf pmakflqaqs kmmamavisg vafvlhclfs wllmlklgwg lvgaaivlna
      241 swiaidvgqf lyiisgtcgq awtgfswkaf qhlwgfvrls fasaimlcle vwyfmalilf
      301 agylknadis vdalsiclni lgwtimvafg mnaaisvrvs nelgaghprt akfsllvavt
      361 ssfmvgvivs lmliifrddy prlfsndsqv qemvidltpl lalciiinni qpvlsgmavg
      421 agwqtavayv niacyyifgv plgltlgfal nlgvkgiwcg mltgtvvqtc vlvgmiyrtn
      481 wtkeasiaee rikkwggeih sgeknmlqdn nnns
//
LOCUS       XP_040944854             613 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: ARM REPEAT PROTEIN INTERACTING WITH ABF2
            [Gossypium hirsutum].
ACCESSION   XP_040944854
VERSION     XP_040944854.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088920.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..613
                     /product="LOW QUALITY PROTEIN: ARM REPEAT PROTEIN
                     INTERACTING WITH ABF2"
                     /calculated_mol_wt=67608
     Region          18..>120
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     CDS             1..613
                     /gene="LOC107909697"
                     /coded_by="XM_041088920.1:199..2040"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:107909697"
ORIGIN      
        1 mmgsaeekri edelsypiml aervraaade aesfkvdcge vgklvdrlsq mlrtlvrstt
       61 svqalyerpi rrvvsevskn leraltlvrk ckrqsilrrv vritsatdfr kvlnlldasi
      121 gdmkwlmgvl dtenngtasg iflslppias ndpiiswvws yiatvqmgql tdrieaannl
      181 asiardndrn kkitveeggi ppllkllkes ssadaqiaaa nallvlaneq ervrsivdem
      241 gvpivvqvlg dslmkvqipv aklvvrmaeh dpvaqedfar envirplvtl lsfetfveds
      301 ktqlgkqsih sivxdqkfss agstsrnysy rpysnsysnl hmegssrggn hrkerenekp
      361 evklqlkinc aealwmlakg svsnsrrite tkgllclakl vekeqgelqy nclmaimeit
      421 aaaesnsdlr raafktnspa akavidqllr vtkeldspil qvpairsvgs lartfparet
      481 rvigplvtql gnkdqevave aaialqkfas penflcmdhs ksiiefngip plmrllrcgd
      541 kaqlhgvvll cylaihagdn ealeqarvlt alegadrtvv gqhpdlkelv tkaiyqlnly
      601 htgvhpqrql fap
//
LOCUS       XP_040944855             108 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-dependent protein kinase inhibitor SMR6 [Gossypium
            hirsutum].
ACCESSION   XP_040944855
VERSION     XP_040944855.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088921.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..108
                     /product="cyclin-dependent protein kinase inhibitor SMR6"
                     /calculated_mol_wt=11743
     Region          1..106
                     /region_name="PLN03031"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215546"
     CDS             1..108
                     /gene="LOC121214749"
                     /coded_by="XM_041088921.1:428..754"
                     /db_xref="GeneID:121214749"
ORIGIN      
        1 mgvsgkpqvd gglesegkkw viagislrap lkpiythpvd dqrdkdstdd kedescsttp
       61 tgqeariptl ltcppapvkh kptlkcnygs vrefftppdl etvfirhv
//
LOCUS       XP_016692809             481 aa            linear   PLN 06-AUG-2024
DEFINITION  glutamate--glyoxylate aminotransferase 2 [Gossypium hirsutum].
ACCESSION   XP_016692809
VERSION     XP_016692809.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837320.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..481
                     /product="glutamate--glyoxylate aminotransferase 2"
                     /calculated_mol_wt=53415
     Region          1..406
                     /region_name="PLN02368"
                     /note="alanine transaminase"
                     /db_xref="CDD:177996"
     CDS             1..481
                     /gene="LOC107909695"
                     /coded_by="XM_016837320.2:565..2010"
                     /db_xref="GeneID:107909695"
ORIGIN      
        1 mglkaldyet mnenvkkvqy avrgelylra selqkegkki iftnvgnpqa lgqkpltfpr
       61 qvvalcqapf llddpnvgli fpadaiarak hylsltsggl gaysdsrgip gvrkevaefi
      121 errdgypsdp elifltdgas kgvmqilnci irgqgdgvlv pvpqyplysa tislfggslv
      181 pyyleetanw gldvnnlres vaqarfkgit vramviinpg nptgqclsea nlreilnfcy
      241 qenlvllgde vyqqniyqde rpfissrkvl mdmgppiske vqlvsfhtvs kgywgecgqr
      301 ggyfemtnip pktvdeiyki asislspnvp aqifmglmvn plkpgdvsyd qfvreskgil
      361 eslrrrarim tdgfnscknv vcnftegamy sfpqlrlppk aieaakqagk vpdvfyclkl
      421 leatgistvp gsgfgqkegv fhlrttilpa eedmpeimss fkkfndefma qyednwnrsr
      481 m
//
LOCUS       XP_016690982             299 aa            linear   PLN 06-AUG-2024
DEFINITION  protein POOR HOMOLOGOUS SYNAPSIS 1 [Gossypium hirsutum].
ACCESSION   XP_016690982
VERSION     XP_016690982.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835493.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690982.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..299
                     /product="protein POOR HOMOLOGOUS SYNAPSIS 1"
                     /calculated_mol_wt=32933
     CDS             1..299
                     /gene="LOC107908264"
                     /coded_by="XM_016835493.2:37..936"
                     /db_xref="GeneID:107908264"
ORIGIN      
        1 magclavvet drpenekpvy tikgqwqvhf arfivypslp stcpslvpks rrgrassgnw
       61 iatsspaasl qiisdlssse tilsiclggk ileehyiskl hvswpqiqci peipargsra
      121 vfvsykdcad qiqkfalrfs thhesesfmn avkeefqgda eteplnpdfg sdsspqsdfi
      181 ssnglpsran qelsdlnpdg sytpqmspgl syeirqqsfd qdemlnnnae difpplppsf
      241 sslltnccpt aekaanqptv sqevdlksqi vrymedssfr dmltkvekii sevgadmll
//
LOCUS       XP_016692805             428 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-1 complex subunit mu-2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692805
VERSION     XP_016692805.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837316.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..428
                     /product="AP-1 complex subunit mu-2 isoform X1"
                     /calculated_mol_wt=48901
     Region          6..145
                     /region_name="AP1_Mu_N"
                     /note="AP-1 complex subunit mu N-terminal domain; cd14835"
                     /db_xref="CDD:341439"
     Site            order(21,24,48..51,59,61,63,75..81,84,88,114..115,
                     118..119,121..123,125..128,137,139..140)
                     /site_type="other"
                     /note="AP-1 beta interface [polypeptide binding]"
                     /db_xref="CDD:341439"
     Region          156..426
                     /region_name="AP-1_Mu1_Cterm"
                     /note="C-terminal domain of medium Mu1 subunit in
                     clathrin-associated adaptor protein (AP) complex AP-1;
                     cd09250"
                     /db_xref="CDD:271158"
     Site            order(168,188,190,192..193,203,213,237,240,264,271,273,
                     287,299,301,307,312,331,336,339..340,349,355..356,358,
                     384..386,389,398..401,410..414,419,421..422)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:271158"
     Site            order(174..176,203,311,386,388,412..415,417)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271158"
     CDS             1..428
                     /gene="LOC107909693"
                     /coded_by="XM_016837316.2:282..1568"
                     /db_xref="GeneID:107909693"
ORIGIN      
        1 magaasalfl ldikgrvlvw rdyrgdvsaa qaerfftkli ekegdpqsqd pvvydngvty
       61 mfiqhsnvyl mtatrqncna asllfflhrv vdvfkhyfee leeeslrdnf vvvyelldei
      121 mdfgypqyte akilsefikt dayrmevtqr ppmavtnavs wrseginykk nevfldvves
      181 vnilvnsngq iirsdvvgal kmrtylsgmp ecklglndrv lleaqgratk gkaidledik
      241 fhqcvrlarf endrtisfip pdgsfdlmty rlstqvkpli wveaqvekhs rsrvefmvka
      301 rsqfkersta tnveimvpvp adasspnvrt smgsaayape ndallwkirs fpggkeymlr
      361 aeftlpsitd eeatqerkap irvkfeipyf tvsgiqvryl kiieksgyqa lpwvryitma
      421 geyelrli
//
LOCUS       XP_016692806             407 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-1 complex subunit mu-2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692806
VERSION     XP_016692806.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837317.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..407
                     /product="AP-1 complex subunit mu-2 isoform X2"
                     /calculated_mol_wt=46290
     Region          6..124
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     Region          135..405
                     /region_name="AP-1_Mu1_Cterm"
                     /note="C-terminal domain of medium Mu1 subunit in
                     clathrin-associated adaptor protein (AP) complex AP-1;
                     cd09250"
                     /db_xref="CDD:271158"
     Site            order(147,167,169,171..172,182,192,216,219,243,250,252,
                     266,278,280,286,291,310,315,318..319,328,334..335,337,
                     363..365,368,377..380,389..393,398,400..401)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:271158"
     Site            order(153..155,182,290,365,367,391..394,396)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271158"
     CDS             1..407
                     /gene="LOC107909693"
                     /coded_by="XM_016837317.2:279..1502"
                     /db_xref="GeneID:107909693"
ORIGIN      
        1 magaasalfl ldikgrvlvw rdyrgdvsaa qaerfftkli ekegdpqsqd pvvydngvty
       61 mfiqhsnvyl mtatrqncna asllfflhrv vdyelldeim dfgypqytea kilsefiktd
      121 ayrmevtqrp pmavtnavsw rseginykkn evfldvvesv nilvnsngqi irsdvvgalk
      181 mrtylsgmpe cklglndrvl leaqgratkg kaidledikf hqcvrlarfe ndrtisfipp
      241 dgsfdlmtyr lstqvkpliw veaqvekhsr srvefmvkar sqfkerstat nveimvpvpa
      301 dasspnvrts mgsaayapen dallwkirsf pggkeymlra eftlpsitde eatqerkapi
      361 rvkfeipyft vsgiqvrylk iieksgyqal pwvryitmag eyelrli
//
LOCUS       XP_016692804             401 aa            linear   PLN 06-AUG-2024
DEFINITION  L-tryptophan--pyruvate aminotransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016692804
VERSION     XP_016692804.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837315.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..401
                     /product="L-tryptophan--pyruvate aminotransferase 1"
                     /calculated_mol_wt=44655
     Region          32..393
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(107..109,139,178,201,221,223..224,232)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99734"
     Site            order(110,149,194,230..232,262,265)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:99734"
     Site            224
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99734"
     CDS             1..401
                     /gene="LOC107909692"
                     /coded_by="XM_016837315.2:261..1466"
                     /db_xref="GeneID:107909692"
ORIGIN      
        1 mvvgfekavs atksvvtsak kapttlssdr vinfargdpt myesywrqmg ekctivisgh
       61 nlmsyfsnag hfcwflmpel drairrlhcv vgnavvdddr yivvgngstq lfqavlyals
      121 ssydpdtepl svvaaapfys sypeetdflr sglykwagda ysfdkdgayi evvtspnnpd
      181 gaireavvnr dggklihdla yywpqytpit gkadndimlf tfskatghag srigwaivkd
      241 ievatkmvkf melssigvsk esqlraakil evisddcqns apdkeenffe ygqrlmsdrw
      301 eklrevvkrn gvfslpkypq dycnfigkyt dpspafawlk skdglncdnl lrelkivtrg
      361 gtnfgvdsny trismlspde dfnlllekls aikgtiingn n
//
LOCUS       XP_016692803             491 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g60770 [Gossypium
            hirsutum].
ACCESSION   XP_016692803
VERSION     XP_016692803.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837314.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692803.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="pentatricopeptide repeat-containing protein
                     At1g60770"
                     /calculated_mol_wt=56154
     Region          98..120
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <102..>203
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          126..153
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          158..205
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          159..188
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          194..223
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <213..435
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          265..292
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          302..329
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          335..364
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..491
                     /gene="LOC107909690"
                     /coded_by="XM_016837314.2:174..1649"
                     /db_xref="GeneID:107909690"
ORIGIN      
        1 malmqqlgrt knvtrrsnky leealfqrlf keggseisvr qqlnhflkss krvykwevde
       61 tlkklrhrkl yfpalklsem matkrgmnkt vsdqaihldl vakaqgipaa enyfvdlpea
      121 lknhltygal lncyckelmt ekaealmekm kelnlplssm synsvmtlyt kigqpervqe
      181 iiqemkscgv ipdsftynvw mralaamndi sgvervieem krdaedaddw ttysniasiy
      241 vdaglfekae kalkelekrn ahrnlsafqf litlygrmgn lhevyriwrs lrlsfhktan
      301 isylnmiqvl vnlkdlpgae kcfrewesgc stydirianv ligayskegl lekalelker
      361 arrrgakpna ktweifldyy lkngdtklav dcvanaistg rgdgrkwvps setigtvmrh
      421 feqvkdvdga egfveilkka vdrvgeevfe llirtyaaag rtspmmrrrl kmekvevsda
      481 skqllevisv e
//
LOCUS       XP_016690979             223 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690979
VERSION     XP_016690979.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835490.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690979.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..223
                     /product="uncharacterized protein"
                     /calculated_mol_wt=25076
     Region          33..212
                     /region_name="SOUL"
                     /note="SOUL heme-binding protein; pfam04832"
                     /db_xref="CDD:461449"
     CDS             1..223
                     /gene="LOC107908261"
                     /coded_by="XM_016835490.2:40..711"
                     /db_xref="GeneID:107908261"
ORIGIN      
        1 mekllllvvt maatinylsa gkllvlsaay tfespsysvv hlesdfeirl ykeiswmsap
       61 vhgtsflnst regfhrlyqy lhganlnsth fsmtkpvlts ispshhgsss ssytvryylp
      121 seykyksppq psaelnlqld kwksqciavr kfsgyanddn vekekdalvs sltkrfpalm
      181 qavennlyyn ysiaqynask hrtgrinevw mdvsgftaeg cpv
//
LOCUS       XP_016692801             314 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 6 [Gossypium hirsutum].
ACCESSION   XP_016692801
VERSION     XP_016692801.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837312.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692801.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..314
                     /product="homeobox protein knotted-1-like 6"
                     /calculated_mol_wt=35244
     Region          74..113
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          126..173
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          212..232
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          252..290
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..314
                     /gene="LOC107909688"
                     /coded_by="XM_016837312.2:443..1387"
                     /db_xref="GeneID:107909688"
ORIGIN      
        1 mdemygfnat geyadkalms penlilpsdy hawlcssgrv pmfgsdelis aasaiseaas
       61 iapeirreed mscvikakia shpsyprllq ayidcqkvga ppeiasilde ilrendvnrr
      121 divptclgad peldefmety cdmlvkyksd lsrpfdeatt flnkiemqlr nlctgasirg
      181 psdeggvssd edisggeveg qegqgksedr glkdrllrrf gshisslkle fskkkkkgkl
      241 prearqtllg wwnvhykwpy pteadklala estgldqkqi nnwfinqrkr hwkpsesmqf
      301 avmdnlsgqf fsed
//
LOCUS       XP_040944857             314 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 6 [Gossypium hirsutum].
ACCESSION   XP_040944857
VERSION     XP_040944857.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088923.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..314
                     /product="homeobox protein knotted-1-like 6"
                     /calculated_mol_wt=35244
     Region          74..113
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          126..173
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          212..232
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          252..290
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..314
                     /gene="LOC107909688"
                     /coded_by="XM_041088923.1:231..1175"
                     /db_xref="GeneID:107909688"
ORIGIN      
        1 mdemygfnat geyadkalms penlilpsdy hawlcssgrv pmfgsdelis aasaiseaas
       61 iapeirreed mscvikakia shpsyprllq ayidcqkvga ppeiasilde ilrendvnrr
      121 divptclgad peldefmety cdmlvkyksd lsrpfdeatt flnkiemqlr nlctgasirg
      181 psdeggvssd edisggeveg qegqgksedr glkdrllrrf gshisslkle fskkkkkgkl
      241 prearqtllg wwnvhykwpy pteadklala estgldqkqi nnwfinqrkr hwkpsesmqf
      301 avmdnlsgqf fsed
//
LOCUS       XP_040944858             314 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox protein knotted-1-like 6 [Gossypium hirsutum].
ACCESSION   XP_040944858
VERSION     XP_040944858.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088924.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..314
                     /product="homeobox protein knotted-1-like 6"
                     /calculated_mol_wt=35244
     Region          74..113
                     /region_name="KNOX1"
                     /note="KNOX1 domain; pfam03790"
                     /db_xref="CDD:461051"
     Region          126..173
                     /region_name="KNOX2"
                     /note="KNOX2 domain; pfam03791"
                     /db_xref="CDD:427506"
     Region          212..232
                     /region_name="ELK"
                     /note="ELK domain; pfam03789"
                     /db_xref="CDD:427504"
     Region          252..290
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..314
                     /gene="LOC107909688"
                     /coded_by="XM_041088924.1:60..1004"
                     /db_xref="GeneID:107909688"
ORIGIN      
        1 mdemygfnat geyadkalms penlilpsdy hawlcssgrv pmfgsdelis aasaiseaas
       61 iapeirreed mscvikakia shpsyprllq ayidcqkvga ppeiasilde ilrendvnrr
      121 divptclgad peldefmety cdmlvkyksd lsrpfdeatt flnkiemqlr nlctgasirg
      181 psdeggvssd edisggeveg qegqgksedr glkdrllrrf gshisslkle fskkkkkgkl
      241 prearqtllg wwnvhykwpy pteadklala estgldqkqi nnwfinqrkr hwkpsesmqf
      301 avmdnlsgqf fsed
//
LOCUS       XP_016692800             593 aa            linear   PLN 06-AUG-2024
DEFINITION  protein trichome birefringence-like 2 [Gossypium hirsutum].
ACCESSION   XP_016692800
VERSION     XP_016692800.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837311.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692800.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..593
                     /product="protein trichome birefringence-like 2"
                     /calculated_mol_wt=66739
     Region          246..299
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          302..585
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..593
                     /gene="LOC107909687"
                     /coded_by="XM_016837311.2:374..2155"
                     /db_xref="GeneID:107909687"
ORIGIN      
        1 mdvkkhalsd qlspkrkvfs rlgwglavsl iaitglmlns sfngpvvgsl fqgyygvsda
       61 tvslhfssss svsnatadtq ntlevdngss viakkqefwe eseggqvdlk dgvdidiegt
      121 qlensyegsk tgnfdvvegr iqqiaqhang svvskngdgv ilektqlgnf sktlnsatla
      181 gknvnanivv dnpggannvt nlskngevvg hfvaekkvve lnkttnspgg ddhprvvkgp
      241 ngsfekcdlf ggrwvkddhs kpyyrpgscp yidkdfdcqr ngrpdkgyik wkwqpngcnl
      301 krlnatdfle rlrgkrlvfi gdslnrnmwe smvcilrrsv kkrkrvyeis grsdfkkkgv
      361 yafrfedync svdfvaspfl vkessfkren gsietlrldl mnpstsmyhd adlmvfntgh
      421 wwthektskg edyyqegdyv yprlkvlnay qkalttwsrw idknvdsrrt qvffrgysvt
      481 hfwgglwnsg gqcdketepi lnetyltkyp skmraveyvi qntktpviyl nisrltdyrk
      541 dghpsiyrre ykteqegnaa grvqdcshwc lpgvpdtwne llyaslvkag rei
//
LOCUS       XP_016690666             373 aa            linear   PLN 06-AUG-2024
DEFINITION  F-box/kelch-repeat protein At1g23390 [Gossypium hirsutum].
ACCESSION   XP_016690666
VERSION     XP_016690666.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835177.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690666.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..373
                     /product="F-box/kelch-repeat protein At1g23390"
                     /calculated_mol_wt=41278
     Region          11..46
                     /region_name="F-box"
                     /note="F-box domain; pfam00646"
                     /db_xref="CDD:425796"
     Region          <54..270
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          133..178
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..373
                     /gene="LOC107907865"
                     /coded_by="XM_016835177.2:8..1129"
                     /db_xref="GeneID:107907865"
ORIGIN      
        1 mttegadirg dvlesilshv plihilpash vskswnhavf sslryfscpk pwlflqcqns
       61 rppyassssf aydprsnhwl rihnknpslq yasairsssn stllymlsps kfsfsfdpfh
      121 ltwhhvdppl vwrtdpvval vgrhvivagg acdfeddpls veiydldarr wdacdampai
      181 lkdsaasawl svasssktly imeqvsgvty sfdptsriws gpldlrhden iffsvigifg
      241 dnlvlvgllg dsenvkdvkv wevkgksfei leeigimpke lveklkgeda sinsikisct
      301 gdfiyiynpr epeelvmcei ggegvcrwgs lknpavsdws rvaekmvlts advglgdlgk
      361 aaesgkvrfs ice
//
LOCUS       XP_016692795             358 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692795
VERSION     XP_016692795.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837306.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..358
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=40712
     CDS             1..358
                     /gene="LOC107909685"
                     /coded_by="XM_016837306.2:383..1459"
                     /db_xref="GeneID:107909685"
ORIGIN      
        1 mitngasrsn llsfltgsst htwqpvmtad tatlsywlnw rfslcalfil ttmavaaiii
       61 wkfegrkkse hedrdndkea aghlyedeaw ntclrsihpa wllsfrvfaf imllalllan
      121 vaidgsgify fytqwtftlv tiyfgfgsai svygcqkhwg kvggdrgdhl sldsehgsyt
      181 ppilgeaanv snqckhfdah raphcpprag vwtyafqiiy qtsagavilt dsvfwfilfp
      241 llkskdygln flivcmhsin vvfllgdtil ncmrfpffri ayfvlwtgtf vvfqwiihac
      301 inlwwpypfl dlsspyaplw ylgvglmhip cygifaliik lktfsfsrss pesfrkrt
//
LOCUS       XP_016692797             332 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692797
VERSION     XP_016692797.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837308.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=37924
     CDS             1..332
                     /gene="LOC107909685"
                     /coded_by="XM_016837308.2:274..1272"
                     /db_xref="GeneID:107909685"
ORIGIN      
        1 mtadtatlsy wlnwrfslca lfilttmava aiiiwkfegr kksehedrdn dkeaaghlye
       61 deawntclrs ihpawllsfr vfafimllal llanvaidgs gifyfytqwt ftlvtiyfgf
      121 gsaisvygcq khwgkvggdr gdhlsldseh gsytppilge aanvsnqckh fdahraphcp
      181 pragvwtyaf qiiyqtsaga viltdsvfwf ilfpllkskd yglnflivcm hsinvvfllg
      241 dtilncmrfp ffriayfvlw tgtfvvfqwi ihacinlwwp ypfldlsspy aplwylgvgl
      301 mhipcygifa liiklktfsf srsspesfrk rt
//
LOCUS       XP_016692798             332 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692798
VERSION     XP_016692798.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837309.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..332
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=37924
     CDS             1..332
                     /gene="LOC107909685"
                     /coded_by="XM_016837309.2:273..1271"
                     /db_xref="GeneID:107909685"
ORIGIN      
        1 mtadtatlsy wlnwrfslca lfilttmava aiiiwkfegr kksehedrdn dkeaaghlye
       61 deawntclrs ihpawllsfr vfafimllal llanvaidgs gifyfytqwt ftlvtiyfgf
      121 gsaisvygcq khwgkvggdr gdhlsldseh gsytppilge aanvsnqckh fdahraphcp
      181 pragvwtyaf qiiyqtsaga viltdsvfwf ilfpllkskd yglnflivcm hsinvvfllg
      241 dtilncmrfp ffriayfvlw tgtfvvfqwi ihacinlwwp ypfldlsspy aplwylgvgl
      301 mhipcygifa liiklktfsf srsspesfrk rt
//
LOCUS       XP_016692799             328 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692799
VERSION     XP_016692799.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837310.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..328
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=37366
     CDS             1..328
                     /gene="LOC107909685"
                     /coded_by="XM_016837310.2:389..1375"
                     /db_xref="GeneID:107909685"
ORIGIN      
        1 mitngasrsn llsfltgsst htwqpvmtad tatlsywlnw rfslcalfil ttmavaaiii
       61 wkfegrkkse hedrdndkea aghlyedeaw ntclrsihpa wllsfrvfaf imllalllan
      121 vaidgsgify fytqwtftlv tiyfgfgsai svygcqkhwg kvggdrgdhl sldsehgsyt
      181 ppilgeaanv snqckhfdah raphcpprag vwtyafqiiy qlivcmhsin vvfllgdtil
      241 ncmrfpffri ayfvlwtgtf vvfqwiihac inlwwpypfl dlsspyaplw ylgvglmhip
      301 cygifaliik lktfsfsrss pesfrkrt
//
LOCUS       XP_040944859             302 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944859
VERSION     XP_040944859.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088925.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..302
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=34578
     CDS             1..302
                     /gene="LOC107909685"
                     /coded_by="XM_041088925.1:274..1182"
                     /db_xref="GeneID:107909685"
ORIGIN      
        1 mtadtatlsy wlnwrfslca lfilttmava aiiiwkfegr kksehedrdn dkeaaghlye
       61 deawntclrs ihpawllsfr vfafimllal llanvaidgs gifyfytqwt ftlvtiyfgf
      121 gsaisvygcq khwgkvggdr gdhlsldseh gsytppilge aanvsnqckh fdahraphcp
      181 pragvwtyaf qiiyqlivcm hsinvvfllg dtilncmrfp ffriayfvlw tgtfvvfqwi
      241 ihacinlwwp ypfldlsspy aplwylgvgl mhipcygifa liiklktfsf srsspesfrk
      301 rt
//
LOCUS       XP_040944860             326 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944860
VERSION     XP_040944860.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088926.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37621
     CDS             1..326
                     /gene="LOC107907864"
                     /coded_by="XM_041088926.1:34..1014"
                     /db_xref="GeneID:107907864"
ORIGIN      
        1 mtaitntlsy wlnwrflvcs lfllaylala tilickfegq rrsrnqdren qevapgviye
       61 eeawstcfkc ihpawllafr mfafitlltl lvinvivdgi gififytqwt ftlitiyflf
      121 gsaisiygck kiwaqargds pyhvssdieq gaeitptpge ttvasnesqh fddrkiagpw
      181 iytfqiiyqa sagaavltdl vfwiilfpfi tsryglelml vicmhsvnvv fllgdtilnc
      241 lrlpffriay fflwtciyvl fqwvlhaysn ipwpypfldl tpayaplwyl gvgmmhlpay
      301 giyalvvrlk eviysrlfpe syrkft
//
LOCUS       XP_016692794             563 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: CRS2-associated factor 2, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016692794
VERSION     XP_016692794.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837305.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692794.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..563
                     /product="LOW QUALITY PROTEIN: CRS2-associated factor 2,
                     chloroplastic"
                     /calculated_mol_wt=62374
     Region          194..277
                     /region_name="CRS1_YhbY"
                     /note="CRS1 / YhbY (CRM) domain; pfam01985"
                     /db_xref="CDD:460405"
     Region          312..395
                     /region_name="CRS1_YhbY"
                     /note="Escherichia coli YhbY is associated with pre-50S
                     ribosomal subunits, which implies a function in ribosome
                     assembly; smart01103"
                     /db_xref="CDD:198171"
     CDS             1..563
                     /gene="LOC107909684"
                     /coded_by="XM_016837305.2:104..1795"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107909684"
ORIGIN      
        1 mpilaslpgl nllsslpsnp pqndttsctp spsppipipk yppprsrnpk tnvprsnpal
       61 siphrrsnyr kpvqkgvist dgdrcvivge ngvsyklpga pfefqysyse tpnaepiair
      121 epaylpfapp tmprpwtgka plkkskknip lfdsfnpppx gkkgvkhvek pgpfpfgkyp
      181 kegktreeil geplkkweik mlvkpllsyn rqvnlgrdgl thnmlglihs hwkrrrvcki
      241 kckgvptvdm dnvcrhieek tggkiihrvg gvvylfrgrn ynyrtrpqyp vmlwkpatpv
      301 ypkliqeape gltkaeadef qkkgksllpi ctlakngvya slvkdvrdaf eecplvkidc
      361 kglqpsdykk igaklkelvp cvllsfddeq ilmwrgrdwk smygdtsstl vpvkadissg
      421 idnsakssdd sgtpdaqrvv sspkmmslwr raiesnkall leelalcpda llekveefeg
      481 mslaiehsce alvlssedgs sgsssaefkg gsysedendi yssddiidde dyddysfaev
      541 npsiplgslp vdkiaerlrr esk
//
LOCUS       XP_016692793              71 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerases I, II, and III subunit RPABC5
            [Gossypium hirsutum].
ACCESSION   XP_016692793
VERSION     XP_016692793.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837304.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..71
                     /product="DNA-directed RNA polymerases I, II, and III
                     subunit RPABC5"
                     /calculated_mol_wt=8044
     Region          1..71
                     /region_name="PLN00032"
                     /note="DNA-directed RNA polymerase; Provisional"
                     /db_xref="CDD:215034"
     CDS             1..71
                     /gene="LOC107909683"
                     /coded_by="XM_016837304.2:198..413"
                     /db_xref="GeneID:107909683"
ORIGIN      
        1 miipvrcftc gkvignkwdt yldllqadyt egdaldalgl vryccrrmlm thvdliekll
       61 nyntlekset s
//
LOCUS       XP_040944861             217 aa            linear   PLN 06-AUG-2024
DEFINITION  pyrrolidone-carboxylate peptidase [Gossypium hirsutum].
ACCESSION   XP_040944861
VERSION     XP_040944861.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088927.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..217
                     /product="pyrrolidone-carboxylate peptidase"
                     /calculated_mol_wt=23654
     Region          9..215
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cd00501"
                     /db_xref="CDD:238279"
     Site            order(16,19,58,166..168)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238279"
     Site            order(96..98,151,154..158,195..196,201..202,204)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(102,168,190)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(103..104,108,110,112,122..123,132..135,144,161..162,
                     165)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            204
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..217
                     /gene="LOC107909682"
                     /coded_by="XM_041088927.1:277..930"
                     /db_xref="GeneID:107909682"
ORIGIN      
        1 mgsqepkavt invtgfkkfq giahnpteti vnnlknfves kgllpagvtl rsctvletag
       61 sgalpvllkv lksgisgidt knehviwlhl gvdggarkft leqqavneas ffcpdelgwq
      121 pmrqpivadd ggifrkrqtt csieailrfl knkgyaamts ndaglficny vyyqslrfae
      181 qkghkslfvh vplfstinee tqmqfvasll eaiastc
//
LOCUS       XP_016692787             675 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At3g05240
            [Gossypium hirsutum].
ACCESSION   XP_016692787
VERSION     XP_016692787.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837298.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692787.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..675
                     /product="putative pentatricopeptide repeat-containing
                     protein At3g05240"
                     /calculated_mol_wt=75630
     Region          32..79
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          69..96
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          81..660
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          102..131
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          141..166
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          168..197
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          272..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          305..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          374..401
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          449..471
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          477..504
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          510..539
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          545..570
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..675
                     /gene="LOC107909680"
                     /coded_by="XM_016837298.2:1..2028"
                     /db_xref="GeneID:107909680"
ORIGIN      
        1 mrlsgflslv rtlpilaqsn yraftsycni npdlgvyykn ktinelirsr rlddaqnlfd
       61 qmsirdsity nllitghgry gnpkqalyiy kemvsqeiqe tgptyssvit vcanegfyre
      121 giqvhcrvis lgfglnlfig sslvnlylhm glvdvawklf dqlpernlaa wnlllngfle
      181 lgkieelfgl hdqmkwegvk pnglsfcyli raccnarfld egmqlhchvi kagwvecnvf
      241 vanalvdfys acgnfidark afllipvqdv iswnsiisvy vendllydai ellsrmhfwd
      301 kkpsirsfvg llnlssrred illgrqihcf ltkvgfdlgs vhiqsalidm ygkcgeiess
      361 qsvygraskr tleccnslit sflhcgitgd vfeifglmvd egiridevtl sttlkalsls
      421 twasldscrl lhccaiksgy esdvavscsl idlysrcghf elsrkvfetl plpnifcfas
      481 iingyarngm gnesvsllea miqkglvpdk vtflcvlngc nhaglleegk fvfnlmksyg
      541 icperqhfsc mvdllgragl vyeaeellqq spgggdsvmw ssllrscgvh kneivgkrva
      601 kvlmelgqds faiylqvsnf ysevgefkas lqirelamar kvmreighss ielealacnw
      661 krtpfppdsl iqvsf
//
LOCUS       XP_040944862             471 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_040944862
VERSION     XP_040944862.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088928.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..471
                     /product="probable polygalacturonase At1g80170 isoform X1"
                     /calculated_mol_wt=50864
     Region          55..459
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..471
                     /gene="LOC107909681"
                     /coded_by="XM_041088928.1:394..1809"
                     /db_xref="GeneID:107909681"
ORIGIN      
        1 mdklflvsfl gllithavgg nmlydkfnil geledldiae edmelfedps wiserggkvl
       61 vnvdsfgavg dgvsddteaf rkawntscat sksvllvppg hrylvnatrf kgpceerlvv
      121 qidgtivapd epndwdpnlp rnwlvfskle gvvfqgngvi dgsgskwwas sckknksnpc
      181 rgaptaltid ssssikvkgl tiqnsqqmnf visrcesvrv sevqvscpgd spntdgihit
      241 gstnvvlqds kigtgddcis ivnassgikm kriycgpghg vsigslgkdn staivtkvvl
      301 dtallrettn gvriktwqhv cscgslikgg sgyvrgvrfe nvrmedvanp iiidqfycds
      361 pktcqnqtsa vqisqimyrn isgttkskea mkfacsdttp csnivlrnin lekkdgtaet
      421 ycnsaqgfgy givhpsadcl ssndkgyili dhkenselae ptgdhiahte l
//
LOCUS       XP_016692789             461 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692789
VERSION     XP_016692789.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837300.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692789.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..461
                     /product="probable polygalacturonase At1g80170 isoform X2"
                     /calculated_mol_wt=49835
     Region          55..449
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..461
                     /gene="LOC107909681"
                     /coded_by="XM_016837300.2:681..2066"
                     /db_xref="GeneID:107909681"
ORIGIN      
        1 mdklflvsfl gllithavgg nmlydkfnil geledldiae edmelfedps wiserggkvl
       61 vnvdsfgavg dgvsddteaf rkawntscat sksvllvppg hrylvnatrf kgpceerlvv
      121 qidgtivapd epndwdpnlp rnwlvfskle gvvfqgngvi dgsgskwwas sckknksnpc
      181 rgaptaltid ssssikvkgl tiqnsqqmnf visrcesvrv sevqvscpgd spntdgihit
      241 gstnvvlqds kigtgddcis ivnassgikm kriycgpghg vsigslgkdn staivtkvvl
      301 dtallrettn gvriktwqgg sgyvrgvrfe nvrmedvanp iiidqfycds pktcqnqtsa
      361 vqisqimyrn isgttkskea mkfacsdttp csnivlrnin lekkdgtaet ycnsaqgfgy
      421 givhpsadcl ssndkgyili dhkenselae ptgdhiahte l
//
LOCUS       XP_040944864             443 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polygalacturonase At1g80170 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944864
VERSION     XP_040944864.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088930.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..443
                     /product="probable polygalacturonase At1g80170 isoform X3"
                     /calculated_mol_wt=47701
     Region          55..431
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..443
                     /gene="LOC107909681"
                     /coded_by="XM_041088930.1:397..1728"
                     /db_xref="GeneID:107909681"
ORIGIN      
        1 mdklflvsfl gllithavgg nmlydkfnil geledldiae edmelfedps wiserggkvl
       61 vnvdsfgavg dgvsddteaf rkawntscat sksvllvppg hrylvnatrf kgpceerlvv
      121 qidgtivapd epndwdpnlp rnwlvfskle gvvfqgngvi dgsgskwwas sckknksnpc
      181 rgaptaltid ssssikvscp gdspntdgih itgstnvvlq dskigtgddc isivnassgi
      241 kmkriycgpg hgvsigslgk dnstaivtkv vldtallret tngvriktwq hvcscgslik
      301 ggsgyvrgvr fenvrmedva npiiidqfyc dspktcqnqt savqisqimy rnisgttksk
      361 eamkfacsdt tpcsnivlrn inlekkdgta etycnsaqgf gygivhpsad clssndkgyi
      421 lidhkensel aeptgdhiah tel
//
LOCUS       XP_016692786             519 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase At1g48100 [Gossypium hirsutum].
ACCESSION   XP_016692786
VERSION     XP_016692786.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837297.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..519
                     /product="polygalacturonase At1g48100"
                     /calculated_mol_wt=56413
     Region          103..498
                     /region_name="PL-6"
                     /note="Polysaccharide Lyase Family 6; cl19188"
                     /db_xref="CDD:450265"
     CDS             1..519
                     /gene="LOC107909678"
                     /coded_by="XM_016837297.2:1..1560"
                     /db_xref="GeneID:107909678"
ORIGIN      
        1 mggvnfrslt fmiliaffvw cssietciar rgkhwrqsry aaalskkkgg shghrnyhng
       61 gskpkppppq shkatpspkp keevppstps phggygydqq stvfnvldfg akgdgksddt
      121 kafqdtwaaa ckveastvvv paefvflvgp isfsgpycqa nivfqldgti iaptdarpwg
      181 kgllqwleft klkgiaiqgk gildgrgsgw wqdapyedpy dderkliipl nstvqerppm
      241 pvrnelsgkm psikptalrf ygsfnvtvtg itiqnspqch lkfdncmgvv vhditvsspg
      301 dspntdgihl qnsndvlihs sdlacgddcv siqtgcsnvy ihnvncgpgh gisigslgrd
      361 ntkacvsnit vrdivmhntm ngvriktwqg gsgsvqgvlf sniqvsevql pividqfycd
      421 krkcsnetaa valsgityek irgtytvkpv hfacsdslpc igvtlsaiel kpvqeryhly
      481 dpfcwqtfge lttptvppis clqigkptnn rvqsdhdvc
//
LOCUS       XP_016692785             339 aa            linear   PLN 06-AUG-2024
DEFINITION  1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Gossypium
            hirsutum].
ACCESSION   XP_016692785
VERSION     XP_016692785.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837296.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692785.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..339
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase,
                     peroxisomal"
                     /calculated_mol_wt=37011
     Region          9..339
                     /region_name="PLN02921"
                     /note="naphthoate synthase"
                     /db_xref="CDD:178509"
     CDS             1..339
                     /gene="LOC107909677"
                     /coded_by="XM_016837296.2:272..1291"
                     /db_xref="GeneID:107909677"
ORIGIN      
        1 makisdneln avtrrivtvs nhfllpigsg snsgltrgsi glcnasmdds yhrihgevas
       61 hevewktacd eygkeftdii yekaigegia kitinrperr nafrpqtike lirafndard
      121 dssigviilt gkgtkafcsg gdqalrkadg yadfenfgrl nvldlqvqir rlpkpviamv
      181 agyavggghv lhmvcdltia adnaifgqtg pkvgsfdagy gssimsrlvg pkkaremwfl
      241 arfytaseae kmglvnavvp lekleqetik wcreilrnsp tairvlkaal navddghagl
      301 qevggnatli fygteegneg ktayverrrp nfskfsrrp
//
LOCUS       XP_016692784             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B [Gossypium hirsutum].
ACCESSION   XP_016692784
VERSION     XP_016692784.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837295.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B"
                     /calculated_mol_wt=20519
     Region          1..181
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107909675"
                     /coded_by="XM_016837295.2:220..765"
                     /db_xref="GeneID:107909675"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 a
//
LOCUS       XP_016692783             181 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor 2-B [Gossypium hirsutum].
ACCESSION   XP_016692783
VERSION     XP_016692783.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837294.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..181
                     /product="ADP-ribosylation factor 2-B"
                     /calculated_mol_wt=20519
     Region          1..181
                     /region_name="PLN00223"
                     /note="ADP-ribosylation factor; Provisional"
                     /db_xref="CDD:165788"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..181
                     /gene="LOC107909675"
                     /coded_by="XM_016837294.2:231..776"
                     /db_xref="GeneID:107909675"
ORIGIN      
        1 mglsfaklfs rlfakkemri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 isftvwdvgg qdkirplwrh yfqntqglif vvdsndrdrv veardelhrm lnedelrdav
      121 llvfankqdl pnamnaaeit dklglhslrq rhwyiqstca tsgeglyegl dwlsnniank
      181 a
//
LOCUS       XP_016692782             570 aa            linear   PLN 06-AUG-2024
DEFINITION  probable nucleoredoxin 1 [Gossypium hirsutum].
ACCESSION   XP_016692782
VERSION     XP_016692782.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837293.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692782.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..570
                     /product="probable nucleoredoxin 1"
                     /calculated_mol_wt=63997
     Region          29..158
                     /region_name="TryX_like_TryX_NRX"
                     /note="Tryparedoxin (TryX)-like family, TryX and
                     nucleoredoxin (NRX) subfamily; TryX and NRX are
                     thioredoxin (TRX)-like protein disulfide oxidoreductases
                     that alter the redox state of target proteins via the
                     reversible oxidation of an active center CXXC motif;
                     cd03009"
                     /db_xref="CDD:239307"
     Site            order(58,61)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239307"
     Region          206..297
                     /region_name="Thioredoxin_8"
                     /note="Thioredoxin-like; pfam13905"
                     /db_xref="CDD:464033"
     Region          348..477
                     /region_name="TryX_like_TryX_NRX"
                     /note="Tryparedoxin (TryX)-like family, TryX and
                     nucleoredoxin (NRX) subfamily; TryX and NRX are
                     thioredoxin (TRX)-like protein disulfide oxidoreductases
                     that alter the redox state of target proteins via the
                     reversible oxidation of an active center CXXC motif;
                     cd03009"
                     /db_xref="CDD:239307"
     Site            order(377,380)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239307"
     Region          504..546
                     /region_name="C1_2"
                     /note="C1 domain; pfam03107"
                     /db_xref="CDD:427141"
     CDS             1..570
                     /gene="LOC107909674"
                     /coded_by="XM_016837293.2:242..1954"
                     /db_xref="GeneID:107909674"
ORIGIN      
        1 maessnnvve tinrdchdfk sllsssdrdf lvrnngdqvk idslkgkkvg lyfsaswcgp
       61 crrftpnlie vytelstkgd fevifisade deesfngyfs kmpwlaipfs dsearkrlde
      121 pysvkgiphl vlldengkvl teegveiire ygeegypftp ekiqelkdle eeakkeqsik
      181 tilvsrsrdf vvtsdgskvp vselegktvg iyfsassfkp sadftqklae vysklkenge
      241 kfevvmisld ddeesfkqsf gapwlalpsk dksceklary felstlptvv iigpdgktlh
      301 pnaadaideh givaypftpe kfaelkeiek aseatqtles vlvsggldfv lgkdgakvkv
      361 adlvgktill yfsahwcppc raftpslvev ykkikekdda fevifissdr dqssfddyys
      421 gmpwlalpfn darksslsrk fkvqgipmli algptgktit kearslvmah gadaypftee
      481 rlkeieaqie emakgwpekl kderheehel vltrrsnyvc nvcdemgqvw sfyceecdfd
      541 lhpkcaleke tkadakegwv cdgevctras
//
LOCUS       XP_016692776             128 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692776
VERSION     XP_016692776.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837287.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..128
                     /product="EH domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=14025
     Region          <8..66
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..128
                     /gene="LOC107909672"
                     /coded_by="XM_016837287.2:248..634"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 mmdallemmq ssllvwttad skrqgflgfk efvfamqlvs lvqeghqish dllngdvdfe
       61 nirppvmegl dtlimrkkqs skssslesng sssnqtspas qlfssksskk islssatsii
      121 dglkrfyl
//
LOCUS       XP_016692777             127 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692777
VERSION     XP_016692777.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837288.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..127
                     /product="EH domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=13926
     Region          <8..65
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..127
                     /gene="LOC107909672"
                     /coded_by="XM_016837288.2:250..633"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 mmdallemmq ssllvwttad skrqgflgfk efvfamqlvs lvqeghqish dllngddfen
       61 irppvmegld tlimrkkqss kssslesngs ssnqtspasq lfssksskki slssatsiid
      121 glkrfyl
//
LOCUS       XP_016692780             125 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016692780
VERSION     XP_016692780.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837291.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="EH domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=13727
     Region          <2..63
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..125
                     /gene="LOC107909672"
                     /coded_by="XM_016837291.2:306..683"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 msnllrpdlk qvwttadskr qgflgfkefv famqlvslvq eghqishdll ngdvdfenir
       61 ppvmegldtl imrkkqssks sslesngsss nqtspasqlf ssksskkisl ssatsiidgl
      121 krfyl
//
LOCUS       XP_016692779             126 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016692779
VERSION     XP_016692779.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837290.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..126
                     /product="EH domain-containing protein 1 isoform X4"
                     /calculated_mol_wt=13853
     Region          <8..64
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..126
                     /gene="LOC107909672"
                     /coded_by="XM_016837290.2:250..630"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 mmdallemmq ssllvwttad skrqgflgfk efvfamqlvs lvqeghqish dllnvdfeni
       61 rppvmegldt limrkkqssk ssslesngss snqtspasql fssksskkis lssatsiidg
      121 lkrfyl
//
LOCUS       XP_040944865             125 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040944865
VERSION     XP_040944865.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088931.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="EH domain-containing protein 1 isoform X5"
                     /calculated_mol_wt=13754
     Region          <8..63
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..125
                     /gene="LOC107909672"
                     /coded_by="XM_041088931.1:249..626"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 mmdallemmq ssllvwttad skrqgflgfk efvfamqlvs lvqeghqish dllndfenir
       61 ppvmegldtl imrkkqssks sslesngsss nqtspasqlf ssksskkisl ssatsiidgl
      121 krfyl
//
LOCUS       XP_040944866             124 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944866
VERSION     XP_040944866.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088932.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..124
                     /product="EH domain-containing protein 1 isoform X6"
                     /calculated_mol_wt=13627
     Region          <2..62
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..124
                     /gene="LOC107909672"
                     /coded_by="XM_041088932.1:306..680"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 msnllrpdlk qvwttadskr qgflgfkefv famqlvslvq eghqishdll ngddfenirp
       61 pvmegldtli mrkkqsskss slesngsssn qtspasqlfs sksskkisls satsiidglk
      121 rfyl
//
LOCUS       XP_040944867             123 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040944867
VERSION     XP_040944867.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088933.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..123
                     /product="EH domain-containing protein 1 isoform X7"
                     /calculated_mol_wt=13554
     Region          <2..61
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..123
                     /gene="LOC107909672"
                     /coded_by="XM_041088933.1:306..677"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 msnllrpdlk qvwttadskr qgflgfkefv famqlvslvq eghqishdll nvdfenirpp
       61 vmegldtlim rkkqssksss lesngsssnq tspasqlfss ksskkislss atsiidglkr
      121 fyl
//
LOCUS       XP_016692781             121 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_016692781
VERSION     XP_016692781.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837292.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..121
                     /product="EH domain-containing protein 1 isoform X8"
                     /calculated_mol_wt=13429
     Region          <8..54
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..121
                     /gene="LOC107909672"
                     /coded_by="XM_016837292.2:253..618"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 mmdallemmq ssllvwttad skrqgflgfk efvfamqlvs lvqeghqish dllngdvdfe
       61 nirppvmegl dtlimrkkqs skssslesng sssnqtspas qlfssksskk nrylcplrlq
      121 l
//
LOCUS       XP_040944868             118 aa            linear   PLN 06-AUG-2024
DEFINITION  EH domain-containing protein 1 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_040944868
VERSION     XP_040944868.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088934.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..118
                     /product="EH domain-containing protein 1 isoform X9"
                     /calculated_mol_wt=13131
     Region          <2..51
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..118
                     /gene="LOC107909672"
                     /coded_by="XM_041088934.1:306..662"
                     /db_xref="GeneID:107909672"
ORIGIN      
        1 msnllrpdlk qvwttadskr qgflgfkefv famqlvslvq eghqishdll ngdvdfenir
       61 ppvmegldtl imrkkqssks sslesngsss nqtspasqlf ssksskknry lcplrlql
//
LOCUS       XP_016692775            2151 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: cell polarity protein mor2-like [Gossypium
            hirsutum].
ACCESSION   XP_016692775
VERSION     XP_016692775.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837286.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692775.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..2151
                     /product="LOW QUALITY PROTEIN: cell polarity protein
                     mor2-like"
                     /calculated_mol_wt=241430
     Region          89..589
                     /region_name="MOR2-PAG1_N"
                     /note="Cell morphogenesis N-terminal; pfam14222"
                     /db_xref="CDD:464107"
     Region          626..1742
                     /region_name="MOR2-PAG1_mid"
                     /note="Cell morphogenesis central region; pfam14228"
                     /db_xref="CDD:433790"
     Region          1767..2049
                     /region_name="MOR2-PAG1_C"
                     /note="Cell morphogenesis C-terminal; pfam14225"
                     /db_xref="CDD:464109"
     CDS             1..2151
                     /gene="LOC107909671"
                     /coded_by="XM_016837286.2:338..6793"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107909671"
ORIGIN      
        1 mrdkmkagsa aklivdallq rflplarrri etaqaqdgqy lrpsdpayeq vldslamvar
       61 htpvplleal lrwresespk gandastfqr klavecifcs acirfveccp qeglteklws
      121 glenfvfdwl inadrvvsqv eypslvdlrg llldlvaqll galsrirfss vterffmeln
      181 trridssvar setlsvingm rylklgvkte gglnasasfv akanpltrap hkrkselyha
      241 lcnmlssila pladsgknqw pptgvepalt lwyeavgqir enllhwmdkq skhiavgypl
      301 vtlllclgdp qifqgnlssh meqlykllrd knhrfmaldc lhrvlrfyls vhaanqppnr
      361 iwdyldsvts qlltvlrkgm ltqdvqhdkl vefcvtiaeh nldfamnhmi lellkqdsps
      421 eakviglral laivmspsse rvgleifkgh dighyipkvk aaiesilrsc nrtyslallt
      481 ssrttidavt keksqgylfr svlkcipyli eevgrsdkit eiipqhgisi dpgvreeavq
      541 vlnrivrylp hrrfaamrgm anfilrlpde fplliqtslg rllelmrfwr acliddklaq
      601 daqdpkqmvq qnigfkkssf hqsgdaiefr aseidavgli flssvdsqir htalellrcv
      661 ralrndirdl tlskqpehsi ryeaepifii dvleehgedi vqscywdsgr lfdyrresdt
      721 ippevtlqsi ifespdknrw arclselvky aaelcpssvq daklevlnrl ahitpaelgg
      781 kanqsqdvdn kldqwlmyam fvcscppdnk esgsvsatrd lyhlifpslr sgseahihaa
      841 tmalghshle sceimfselt sfveelsset egkpkwksqk qtrredlrvh ianiyrnvae
      901 niwpgflgrk pvfrrhylrf iedttkyita asadsfqetq plryalasvl rslapefvds
      961 kserfdlrnr kklfdlllsw cddlgstwgq dgvsdyrrev eryktsqhrs kdsvdkisfd
     1021 kelseqveai qwasmtamas llygpcfddn arkmsgrvif winslfnepa pkapygyspv
     1081 dprtlsysky tggrgaaghd rhkgghhrva laklalxnll ltnldlfpac idqcyysdpa
     1141 iadgyfsila evymrqeipk ceiqrllsli lykvvdpsrq irddalqmle tlsirewaed
     1201 gmegsgsyra avvgnlpdsy qqfqyklsck lakdhpelsq llceeimqrq ldavdiiaqh
     1261 qvltcmapwi enlnfwklkd sgwserllks lyyvtwrhgd qfpdeieklw stiaskprni
     1321 spvldflitk giedfdsnas aeisgafaty fsvakrvsly laricpqrti dhlvyqlsqr
     1381 mledsiepig taankgdang nfilefsqgp aaaqiasvad sqphmspllv rgsldgplrn
     1441 tsgslswrta gvtgrsasgp lspmppelni vpvtagrsgq llpalvnmsg plmgvrsstg
     1501 slrsrhvsrd sgdylidtpn sgedilhsav gmhgvnakel qsalqghqqh sltradiali
     1561 llaeiayend edfrehlpll fhvtfvsmds sedivlehcq hllvnllysl agrhlelyev
     1621 essdgenkqq vvslikyvqs krgsmmwene dptvtrtelp saallsalvq smvdaiffqg
     1681 dlretwgvea lkwamectsr hlacrshqiy ralrpsvtsd tcvlllrclh rclgnpmppv
     1741 lgfimeillt lqvmvenmep ekvilypqlf wgcvammhtd fvhvycqvle lfsrvidrls
     1801 frdrtienvl lssmprdeld sgdigdlqrm esrgydfpvt sgnlpafegv qplvlkglms
     1861 tvshgvaiev lsritvhscd sifgdretrl lmhitgllpw lclqlskdpl vcpasplqqq
     1921 hhkacfvaan iaiwcraesl delatvfmay sggeitsidn llacvspllc newfpkhsal
     1981 afghllrlle rgpveyqrvi llmlkallqh tpmdsaqsph myaivsqlve stlcwealsv
     2041 leallqscss ltgshphesg sfengtdekm lapqtsfkar sgplqyalgs gfgigstsap
     2101 qavpnesgtt prevalqntr lilgrvldsc algrrreyrr lvpfvttign p
//
LOCUS       XP_016690978             195 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690978
VERSION     XP_016690978.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835489.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20679
     CDS             1..195
                     /gene="LOC107908260"
                     /coded_by="XM_016835489.2:170..757"
                     /db_xref="GeneID:107908260"
ORIGIN      
        1 mstqtqqqpv vvyptsvsmq appshsshsg gsfttvfivv aviilasais cflgrfcgrr
       61 mnqrkpspkr kqsrdlrrpe kgdiefgsdg rinasatakp gdhgepskgl dikmplsehg
      121 dpagigigmp gngyvrefri sehgdpagfg vpgngypels ipengitagf rmhgngepme
      181 frmpghghng enkac
//
LOCUS       XP_016667418             301 aa            linear   PLN 06-AUG-2024
DEFINITION  histone H3.v1 [Gossypium hirsutum].
ACCESSION   XP_016667418
VERSION     XP_016667418.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016811929.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016667418.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..301
                     /product="histone H3.v1"
                     /calculated_mol_wt=34104
     Region          97..281
                     /region_name="DUF1645"
                     /note="Protein of unknown function (DUF1645); pfam07816"
                     /db_xref="CDD:429678"
     CDS             1..301
                     /gene="LOC107887693"
                     /coded_by="XM_016811929.2:176..1081"
                     /db_xref="GeneID:107887693"
ORIGIN      
        1 mqvmtsslpl spnfndfspt gkfshdfgvk lqlkadeepn meqeeklnnq pgmeddkede
       61 eeveeqneee edeeeeeeee eefsfvclnp dgspisaddl fqdgqirpif plfnqdllya
      121 aaddafvsks gegdmaqrap vrklfledsp datssepagp ycewrsgrtv teaspescrk
      181 snstgfsklw rfrdlklrcs sdgkdafvfl shhsssssss vktekkkeke ekkdkvkvse
      241 ekpkvkktqk siktaslsah eklyvknraq kqgdkrrsyl pyrqvgfftn vnglsrnvhp
      301 f
//
LOCUS       XP_040944869             344 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944869
VERSION     XP_040944869.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088935.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..344
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X1"
                     /calculated_mol_wt=38661
     Region          165..344
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(191,246,248,256,259)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(193..195,220..224,227..228,231,234,240..241,244,246,
                     248,256,258..259,261..262,265..266,268..269,311)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(220,248,251..252,254,256..257,311..313)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(246,248,259)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..344
                     /gene="LOC107909669"
                     /coded_by="XM_041088935.1:184..1218"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 miyliprcsv twmwcfsiqf tnkglhsstm yqfvdgretl ksivvqdsss qkiysplnvg
       61 ekkericgip qtecqslriv ieervglasc neldfvssyr ghgspcpvpd qatttcklfn
      121 vhavtqssps tilsftekas qtshvsrvid sdqqssnele asrvlqnvhi strlmedfle
      181 lakentkkdl etcgvlgafl ekgtfyvttl iipkqestsn scqaisdeei faiqnerslf
      241 pvgwihthps qscfmssidl htqysyqvmv peafaivvap tdnsrsygif rvsepngmsl
      301 lkecqekgsq fhsheetvdg spiyercthv yknsnlrfei fdlr
//
LOCUS       XP_040944870             339 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944870
VERSION     XP_040944870.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088936.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..339
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X2"
                     /calculated_mol_wt=38119
     Region          160..339
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(186,241,243,251,254)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(188..190,215..219,222..223,226,229,235..236,239,241,
                     243,251,253..254,256..257,260..261,263..264,306)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(215,243,246..247,249,251..252,306..308)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(241,243,254)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..339
                     /gene="LOC107909669"
                     /coded_by="XM_041088936.1:188..1207"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 miyliprcsv twmwcfsiqf tnkglhsstm yqfvdgretl ksivvqdsss qkiysplner
       61 icgipqtecq slrivieerv glascneldf vssyrghgsp cpvpdqattt cklfnvhavt
      121 qsspstilsf tekasqtshv srvidsdqqs sneleasrvl qnvhistrlm edflelaken
      181 tkkdletcgv lgaflekgtf yvttliipkq estsnscqai sdeeifaiqn erslfpvgwi
      241 hthpsqscfm ssidlhtqys yqvmvpeafa ivvaptdnsr sygifrvsep ngmsllkecq
      301 ekgsqfhshe etvdgspiye rcthvyknsn lrfeifdlr
//
LOCUS       XP_040944871             331 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944871
VERSION     XP_040944871.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088937.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..331
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X3"
                     /calculated_mol_wt=37200
     Region          152..331
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(178,233,235,243,246)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(180..182,207..211,214..215,218,221,227..228,231,233,
                     235,243,245..246,248..249,252..253,255..256,298)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(207,235,238..239,241,243..244,298..300)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(233,235,246)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..331
                     /gene="LOC107909669"
                     /coded_by="XM_041088937.1:115..1110"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 mtddrfsqmp nnrysqmyqf vdgretlksi vvqdsssqki ysplnvgekk ericgipqte
       61 cqslriviee rvglascnel dfvssyrghg spcpvpdqat ttcklfnvha vtqsspstil
      121 sftekasqts hvsrvidsdq qssneleasr vlqnvhistr lmedflelak entkkdletc
      181 gvlgaflekg tfyvttliip kqestsnscq aisdeeifai qnerslfpvg wihthpsqsc
      241 fmssidlhtq ysyqvmvpea faivvaptdn srsygifrvs epngmsllke cqekgsqfhs
      301 heetvdgspi yercthvykn snlrfeifdl r
//
LOCUS       XP_040944872             326 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944872
VERSION     XP_040944872.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088938.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..326
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X4"
                     /calculated_mol_wt=36658
     Region          147..326
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(173,228,230,238,241)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(175..177,202..206,209..210,213,216,222..223,226,228,
                     230,238,240..241,243..244,247..248,250..251,293)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(202,230,233..234,236,238..239,293..295)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(228,230,241)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..326
                     /gene="LOC107909669"
                     /coded_by="XM_041088938.1:114..1094"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 mtddrfsqmp nnrysqmyqf vdgretlksi vvqdsssqki ysplnericg ipqtecqslr
       61 ivieervgla scneldfvss yrghgspcpv pdqatttckl fnvhavtqss pstilsftek
      121 asqtshvsrv idsdqqssne leasrvlqnv histrlmedf lelakentkk dletcgvlga
      181 flekgtfyvt tliipkqest snscqaisde eifaiqners lfpvgwihth psqscfmssi
      241 dlhtqysyqv mvpeafaivv aptdnsrsyg ifrvsepngm sllkecqekg sqfhsheetv
      301 dgspiyerct hvyknsnlrf eifdlr
//
LOCUS       XP_040944873             319 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X5 [Gossypium hirsutum].
ACCESSION   XP_040944873
VERSION     XP_040944873.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088939.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..319
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X5"
                     /calculated_mol_wt=35776
     Region          165..319
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
     CDS             1..319
                     /gene="LOC107909669"
                     /coded_by="XM_041088939.1:189..1148"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 miyliprcsv twmwcfsiqf tnkglhsstm yqfvdgretl ksivvqdsss qkiysplnvg
       61 ekkericgip qtecqslriv ieervglasc neldfvssyr ghgspcpvpd qatttcklfn
      121 vhavtqssps tilsftekas qtshvsrvid sdqqssnele asrvlqnvhi strlmedfle
      181 lakentkkdl etcgvlgafl ekgtfyvttl iipkqestsn sthpsqscfm ssidlhtqys
      241 yqvmvpeafa ivvaptdnsr sygifrvsep ngmsllkecq ekgsqfhshe etvdgspiye
      301 rcthvyknsn lrfeifdlr
//
LOCUS       XP_040944874             306 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944874
VERSION     XP_040944874.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088940.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..306
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X6"
                     /calculated_mol_wt=34315
     Region          152..306
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
     CDS             1..306
                     /gene="LOC107909669"
                     /coded_by="XM_041088940.1:115..1035"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 mtddrfsqmp nnrysqmyqf vdgretlksi vvqdsssqki ysplnvgekk ericgipqte
       61 cqslriviee rvglascnel dfvssyrghg spcpvpdqat ttcklfnvha vtqsspstil
      121 sftekasqts hvsrvidsdq qssneleasr vlqnvhistr lmedflelak entkkdletc
      181 gvlgaflekg tfyvttliip kqestsnsth psqscfmssi dlhtqysyqv mvpeafaivv
      241 aptdnsrsyg ifrvsepngm sllkecqekg sqfhsheetv dgspiyerct hvyknsnlrf
      301 eifdlr
//
LOCUS       XP_040944875             301 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_040944875
VERSION     XP_040944875.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088941.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..301
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X7"
                     /calculated_mol_wt=33773
     Region          147..301
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
     CDS             1..301
                     /gene="LOC107909669"
                     /coded_by="XM_041088941.1:114..1019"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 mtddrfsqmp nnrysqmyqf vdgretlksi vvqdsssqki ysplnericg ipqtecqslr
       61 ivieervgla scneldfvss yrghgspcpv pdqatttckl fnvhavtqss pstilsftek
      121 asqtshvsrv idsdqqssne leasrvlqnv histrlmedf lelakentkk dletcgvlga
      181 flekgtfyvt tliipkqest snsthpsqsc fmssidlhtq ysyqvmvpea faivvaptdn
      241 srsygifrvs epngmsllke cqekgsqfhs heetvdgspi yercthvykn snlrfeifdl
      301 r
//
LOCUS       XP_016692773             297 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_016692773
VERSION     XP_016692773.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837284.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692773.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..297
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X8"
                     /calculated_mol_wt=33342
     Region          118..297
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(144,199,201,209,212)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(146..148,173..177,180..181,184,187,193..194,197,199,
                     201,209,211..212,214..215,218..219,221..222,264)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(173,201,204..205,207,209..210,264..266)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(199,201,212)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..297
                     /gene="LOC107909669"
                     /coded_by="XM_016837284.2:115..1008"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 mtddrfsqmp nnrysqeric gipqtecqsl rivieervgl ascneldfvs syrghgspcp
       61 vpdqatttck lfnvhavtqs spstilsfte kasqtshvsr vidsdqqssn eleasrvlqn
      121 vhistrlmed flelakentk kdletcgvlg aflekgtfyv ttliipkqes tsnscqaisd
      181 eeifaiqner slfpvgwiht hpsqscfmss idlhtqysyq vmvpeafaiv vaptdnsrsy
      241 gifrvsepng msllkecqek gsqfhsheet vdgspiyerc thvyknsnlr feifdlr
//
LOCUS       XP_016692774             272 aa            linear   PLN 06-AUG-2024
DEFINITION  AMSH-like ubiquitin thioesterase 2 isoform X9 [Gossypium hirsutum].
ACCESSION   XP_016692774
VERSION     XP_016692774.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837285.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692774.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..272
                     /product="AMSH-like ubiquitin thioesterase 2 isoform X9"
                     /calculated_mol_wt=30457
     Region          118..272
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
     CDS             1..272
                     /gene="LOC107909669"
                     /coded_by="XM_016837285.2:115..933"
                     /db_xref="GeneID:107909669"
ORIGIN      
        1 mtddrfsqmp nnrysqeric gipqtecqsl rivieervgl ascneldfvs syrghgspcp
       61 vpdqatttck lfnvhavtqs spstilsfte kasqtshvsr vidsdqqssn eleasrvlqn
      121 vhistrlmed flelakentk kdletcgvlg aflekgtfyv ttliipkqes tsnsthpsqs
      181 cfmssidlht qysyqvmvpe afaivvaptd nsrsygifrv sepngmsllk ecqekgsqfh
      241 sheetvdgsp iyercthvyk nsnlrfeifd lr
//
LOCUS       XP_016692772             373 aa            linear   PLN 06-AUG-2024
DEFINITION  peroxisomal membrane protein PEX14 [Gossypium hirsutum].
ACCESSION   XP_016692772
VERSION     XP_016692772.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837283.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..373
                     /product="peroxisomal membrane protein PEX14"
                     /calculated_mol_wt=41499
     Region          1..46
                     /region_name="Pex14_N"
                     /note="Pex14 N-terminal domain; pfam04695"
                     /db_xref="CDD:461395"
     Region          281..323
                     /region_name="DUF5572"
                     /note="Family of unknown function (DUF5572); pfam17733"
                     /db_xref="CDD:436001"
     CDS             1..373
                     /gene="LOC107909668"
                     /coded_by="XM_016837283.2:195..1316"
                     /db_xref="GeneID:107909668"
ORIGIN      
        1 mreelvdmav kfllhptvgr spvsqrrlfl ekrglsseei deafrrvsdt sssvtfrqdi
       61 nssqdvqskp lhsvqlqgta qssqplvasi ltasrpswfs wsyaifsivl lifsgvgtsm
      121 llknfflprl kswickvvfe edddkgrksk lclskeaies akaaaaasvn aakasleilq
      181 skkdeerhfd dllrrlgshv aelrsmsitv qrlegdgnas hknpeqylqh tsqygrnsnl
      241 skmsvvqrgy pgptkfkpsg isnfdslvrp ssapprppag qypksyievl akvqrgekpp
      301 gikdtddspp nphitprlkr weiaqpqnsf gysrdrgfsq pngenalpww krnntnirgv
      361 eagngsyglr sdk
//
LOCUS       XP_040944876             279 aa            linear   PLN 06-AUG-2024
DEFINITION  carbonic anhydrase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944876
VERSION     XP_040944876.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088942.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..279
                     /product="carbonic anhydrase 2 isoform X1"
                     /calculated_mol_wt=30312
     Region          23..279
                     /region_name="beta_CA"
                     /note="Carbonic anhydrases (CA) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism in which the nucleophilic
                     attack of a zinc-bound hydroxide ion on carbon dioxide is
                     followed by the regeneration of an...; cl00391"
                     /db_xref="CDD:469755"
     Site            order(101,103,110,112..114,126,129,155,160,170,173,257)
                     /site_type="active"
                     /note="active site clefts [active]"
                     /db_xref="CDD:238449"
     Site            order(110,112,170,173)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238449"
     Site            order(111..114,116,118..121,126..128,130,132,150..151,
                     154..155,196,257,259..260,262,264)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238449"
     CDS             1..279
                     /gene="LOC107909667"
                     /coded_by="XM_041088942.1:434..1273"
                     /db_xref="GeneID:107909667"
ORIGIN      
        1 maakfkkcmm lccsakvske edmgsesyee aiaalsklls dkadlgsvaa akikqitael
       61 eaaadstqfd pvkrletgfl hfkkekfdkn pdlygalakg qspkflvfac sdsrvcpshi
      121 lnfqpgeafi vrniasmvpp ydkkkysgag aaieyavlhl kvenivvigh sccggikglm
      181 sipddgttas dfieqwvsic tpaktkvkse qnelsfseqc tncekeavnv slgnlltypf
      241 vreavvkktv alkgahydfv ngkfdlwnld fkisptlai
//
LOCUS       XP_040944877             257 aa            linear   PLN 06-AUG-2024
DEFINITION  carbonic anhydrase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944877
VERSION     XP_040944877.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088943.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..257
                     /product="carbonic anhydrase 2 isoform X2"
                     /calculated_mol_wt=27848
     Region          1..257
                     /region_name="beta_CA"
                     /note="Carbonic anhydrases (CA) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism in which the nucleophilic
                     attack of a zinc-bound hydroxide ion on carbon dioxide is
                     followed by the regeneration of an...; cl00391"
                     /db_xref="CDD:469755"
     Site            order(79,81,88,90..92,104,107,133,138,148,151,235)
                     /site_type="active"
                     /note="active site clefts [active]"
                     /db_xref="CDD:238449"
     Site            order(88,90,148,151)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238449"
     Site            order(89..92,94,96..99,104..106,108,110,128..129,132..133,
                     174,235,237..238,240,242)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238449"
     CDS             1..257
                     /gene="LOC107909667"
                     /coded_by="XM_041088943.1:139..912"
                     /db_xref="GeneID:107909667"
ORIGIN      
        1 mgsesyeeai aalskllsdk adlgsvaaak ikqitaelea aadstqfdpv krletgflhf
       61 kkekfdknpd lygalakgqs pkflvfacsd srvcpshiln fqpgeafivr niasmvppyd
      121 kkkysgagaa ieyavlhlkv enivvighsc cggikglmsi pddgttasdf ieqwvsictp
      181 aktkvkseqn elsfseqctn cekeavnvsl gnlltypfvr eavvkktval kgahydfvng
      241 kfdlwnldfk isptlai
//
LOCUS       XP_016692770             385 aa            linear   PLN 06-AUG-2024
DEFINITION  2-methylene-furan-3-one reductase [Gossypium hirsutum].
ACCESSION   XP_016692770
VERSION     XP_016692770.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837281.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692770.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="2-methylene-furan-3-one reductase"
                     /calculated_mol_wt=40843
     Region          77..381
                     /region_name="MDR_like_2"
                     /note="alcohol dehydrogenase and quinone reductase-like
                     medium chain degydrogenases/reductases; cd05289"
                     /db_xref="CDD:176191"
     Site            order(117..119,122,209,213,234..239,260..261,263,277,
                     296..297,316..317,327..329)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176191"
     CDS             1..385
                     /gene="LOC107909666"
                     /coded_by="XM_016837281.2:171..1328"
                     /db_xref="GeneID:107909666"
ORIGIN      
        1 mkatlptphl rsfpsptpls fklsfafpet rrkslsisst pkgtpspsla yvplrvtass
       61 qaasaptvnl taiptemkaw vygeyggvdv lkldekvsvp evkedevlik vaaaalnpvd
      121 akrrqgkfka tdsplptvpg ydvagvvvkv gsqvkelkeg devygninek alegprqfgs
      181 laqyttveek llalkpknld faqaaglpla ietayegler tgfssgksil vlngsggvgs
      241 lviqlakqvf gaskvaatss tgklellksl gvdlaidyik enfedlpekf dvvfdaigqc
      301 dravkavkeg gsvvaltgav tppgfrfvvt skgevlkkln pylesgkvkp vvdprgpfpf
      361 tqvdeafsyi etnratgkvv ihpip
//
LOCUS       XP_016674693             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g28440 [Gossypium hirsutum].
ACCESSION   XP_016674693
VERSION     XP_016674693.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819204.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674693.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein At4g28440"
                     /calculated_mol_wt=15130
     Region          13..129
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
     Site            order(26,82,84,86,108)
                     /site_type="active"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239937"
     Site            order(31..33,55..58,60,66..68,70,81,89..91,98..100)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239937"
     CDS             1..136
                     /gene="LOC107894018"
                     /coded_by="XM_016819204.2:396..806"
                     /db_xref="GeneID:107894018"
ORIGIN      
        1 maeskslrkp vftkvdqlrp gtightltvk vvntkmvlqk gradgppvrq mriaeclvgd
       61 etgmiiftar neqvdlmkeg ttitlrnaki dmfkgsmrla vdkwgrveva epanfnvked
      121 nnlslieyel vnvvee
//
LOCUS       XP_040944878             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g28440 [Gossypium hirsutum].
ACCESSION   XP_040944878
VERSION     XP_040944878.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088944.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein At4g28440"
                     /calculated_mol_wt=15130
     Region          13..129
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
     Site            order(26,82,84,86,108)
                     /site_type="active"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239937"
     Site            order(31..33,55..58,60,66..68,70,81,89..91,98..100)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239937"
     CDS             1..136
                     /gene="LOC107894018"
                     /coded_by="XM_041088944.1:312..722"
                     /db_xref="GeneID:107894018"
ORIGIN      
        1 maeskslrkp vftkvdqlrp gtightltvk vvntkmvlqk gradgppvrq mriaeclvgd
       61 etgmiiftar neqvdlmkeg ttitlrnaki dmfkgsmrla vdkwgrveva epanfnvked
      121 nnlslieyel vnvvee
//
LOCUS       XP_016674692             136 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g28440 [Gossypium hirsutum].
ACCESSION   XP_016674692
VERSION     XP_016674692.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016819203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016674692.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="uncharacterized protein At4g28440"
                     /calculated_mol_wt=15130
     Region          13..129
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
     Site            order(26,82,84,86,108)
                     /site_type="active"
                     /note="generic binding surface II [active]"
                     /db_xref="CDD:239937"
     Site            order(31..33,55..58,60,66..68,70,81,89..91,98..100)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239937"
     CDS             1..136
                     /gene="LOC107894018"
                     /coded_by="XM_016819203.2:179..589"
                     /db_xref="GeneID:107894018"
ORIGIN      
        1 maeskslrkp vftkvdqlrp gtightltvk vvntkmvlqk gradgppvrq mriaeclvgd
       61 etgmiiftar neqvdlmkeg ttitlrnaki dmfkgsmrla vdkwgrveva epanfnvked
      121 nnlslieyel vnvvee
//
LOCUS       XP_016666069             628 aa            linear   PLN 06-AUG-2024
DEFINITION  polygalacturonase 1 beta-like protein 3 [Gossypium hirsutum].
ACCESSION   XP_016666069
VERSION     XP_016666069.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016810580.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666069.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..628
                     /product="polygalacturonase 1 beta-like protein 3"
                     /calculated_mol_wt=68599
     Region          410..625
                     /region_name="BURP"
                     /note="BURP domain; cl03923"
                     /db_xref="CDD:470910"
     CDS             1..628
                     /gene="LOC107886579"
                     /coded_by="XM_016810580.2:137..2023"
                     /db_xref="GeneID:107886579"
ORIGIN      
        1 mlnlwtfifl cflhlssfnv vlggvgdslv senpftpkas virywnkeir reitkthfll
       61 skvspltavd sasfsklaaq ndlashlpsf cssaklfcfp dlspslekhp kderfavysn
      121 mnfsnygtdr lagvdsfkny sedsnivvds fhrysrdstg hkeqfanyas egnvvdqnfh
      181 syaasatggs gnfnnynrev nnpnlrfssy gddsnghgqt fkqytenana gngqsfssyg
      241 kngngvpndf ssygkganvi gsgfsgygea angandsfts ygfdsnapqn tfksygdggn
      301 aavntfssyr dqsnvgddsf qsyaknsnge kvdfsnygqs fnegtdkftg ygqgavgqsi
      361 gfkiygrnnt fkdyakkegi vfgrynngss setaqvkggs savskwvepg kffrekllkq
      421 gtvmpmpdik dkmpvrsflp rtivsklpfs sskigelkri fhagdnstle tvmldalkec
      481 erapspgetk rcvgsaedmi dfatsvlgrn vevrttenvk gskqnikigs vkginggkvt
      541 ksvschqsly pyllyychsv pevrvyeadi ldpkslekin hgvaichldt sswssnhgaf
      601 lalgsgpgri evchwifend mtwtisds
//
LOCUS       XP_016666068             102 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016666068
VERSION     XP_016666068.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016810579.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016666068.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..102
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10638
     CDS             1..102
                     /gene="LOC107886578"
                     /coded_by="XM_016810579.2:126..434"
                     /db_xref="GeneID:107886578"
ORIGIN      
        1 maatcgrrtl gfscssakti fthlpsstpa nnklpglfsp nkisasrfsl rnltfsrlpv
       61 emggavtlip lhsatasalf tsllslhnqs wgclsegfat pl
//
LOCUS       XP_016692724             487 aa            linear   PLN 06-AUG-2024
DEFINITION  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692724
VERSION     XP_016692724.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837235.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..487
                     /product="deoxynucleoside triphosphate triphosphohydrolase
                     SAMHD1 homolog isoform X1"
                     /calculated_mol_wt=56065
     Region          24..353
                     /region_name="YdhJ"
                     /note="HD superfamily phosphohydrolase [General function
                     prediction only]; COG1078"
                     /db_xref="CDD:440696"
     CDS             1..487
                     /gene="LOC107909630"
                     /coded_by="XM_016837235.2:334..1797"
                     /db_xref="GeneID:107909630"
ORIGIN      
        1 mgtngneevt slyslscrdr rfskhihdnv hgniyldpvp lmikvflemt fclllmqffl
       61 qfvdteqfqr lrelkqlglt hmvypgavhs rfehslgvyw lageavhtvq ghqgseinie
      121 rndirtvkla gllhdvghgp fshlferefl prvlngsews hedmsvkmid yivdahhiei
      181 dsailnnvke mvlassangs qntvnekrfl ydivangqng idvdkfdyiv rdsracglgc
      241 nfqfqrllet mrvmgdeicy rakdyltvhk lfatradlhr tvythakvka ielmvvdalt
      301 lahgelsisa siqepakfwk lddsilrqie tsdkqelkka rdlvlrirrr dlyqfcnefa
      361 vpkdkqehfk ditpqdivcs qkngdtplne edisvsivki dltrgrsnpl esikffqdye
      421 sdykfpmrde rishllpafc qdmivrvysk kpelvgavsk afenyqlkty gmkaqvhdtp
      481 ekkkcrv
//
LOCUS       XP_016692726             468 aa            linear   PLN 06-AUG-2024
DEFINITION  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692726
VERSION     XP_016692726.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837237.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..468
                     /product="deoxynucleoside triphosphate triphosphohydrolase
                     SAMHD1 homolog isoform X2"
                     /calculated_mol_wt=53813
     Region          24..334
                     /region_name="YdhJ"
                     /note="HD superfamily phosphohydrolase [General function
                     prediction only]; COG1078"
                     /db_xref="CDD:440696"
     CDS             1..468
                     /gene="LOC107909630"
                     /coded_by="XM_016837237.2:326..1732"
                     /db_xref="GeneID:107909630"
ORIGIN      
        1 mgtngneevt slyslscrdr rfskhihdnv hgniyldpff lqfvdteqfq rlrelkqlgl
       61 thmvypgavh srfehslgvy wlageavhtv qghqgseini erndirtvkl agllhdvghg
      121 pfshlferef lprvlngsew shedmsvkmi dyivdahhie idsailnnvk emvlassang
      181 sqntvnekrf lydivangqn gidvdkfdyi vrdsracglg cnfqfqrlle tmrvmgdeic
      241 yrakdyltvh klfatradlh rtvythakvk aielmvvdal tlahgelsis asiqepakfw
      301 klddsilrqi etsdkqelkk ardlvlrirr rdlyqfcnef avpkdkqehf kditpqdivc
      361 sqkngdtpln eedisvsivk idltrgrsnp lesikffqdy esdykfpmrd erishllpaf
      421 cqdmivrvys kkpelvgavs kafenyqlkt ygmkaqvhdt pekkkcrv
//
LOCUS       XP_016692727             936 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 25 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692727
VERSION     XP_016692727.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837238.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..936
                     /product="RNA-binding protein 25 isoform X1"
                     /calculated_mol_wt=105115
     Region          <2..206
                     /region_name="SOBP"
                     /note="Sine oculis-binding protein; pfam15279"
                     /db_xref="CDD:464609"
     Region          222..302
                     /region_name="RRM_RBM25"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 25 and similar proteins; cd12446"
                     /db_xref="CDD:409880"
     Region          <308..876
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          852..925
                     /region_name="PWI"
                     /note="domain in splicing factors; smart00311"
                     /db_xref="CDD:214609"
     CDS             1..936
                     /gene="LOC107909631"
                     /coded_by="XM_016837238.2:263..3073"
                     /db_xref="GeneID:107909631"
ORIGIN      
        1 maespsspaa ldttnsqskp dsdnpnplpt qpdpspsstv stqlqpnpnp saplvspqpp
       61 pavpsystpp ppisgaatav ppappsfrpv pqfsplpnfq ppglqppgvs sapgsipppl
      121 mqyqvpagqv pnpalrpfap ipngyaalpg avppgtmppp gllrypspyp amirpafppr
      181 ppgaigvmpt vsrppvpgar piippvirpa vpnvtptekp qttvyigkia ptvdndfmls
      241 llrlcgpvks wkrpsngtpk afglcdfesa egvlravrll skfnidgqel vvnvsqatke
      301 ylekyvekkt enakklnepp saesekegen avgdvkness stsvedpkkn sdsgnrenim
      361 diansgivtd edreadrdas eklagmieer lktnplpppp pqtapdgsgk snsdlpaksr
      421 dgnsdidlmr ndgaegkndd ettseskatt endrpetssp drrydrsrdr eqdlkrdker
      481 eierlerete rermrkereq rrkieeaere yekflrdweq rekdkekqrq yekerekere
      541 rkrkkeiryd eeddddedsr krlrrsvlee krrkrlreke ddladrlkee keiaeakkra
      601 eeeqlqlqqq rdalkllsgr fangaaknvl aeepsteskd kaveqhyere sshenqisgd
      661 gnmqngsvde snvafvsasd trqsgnaprk lgfglvgsgk rttvpsvfhe eedddaqkek
      721 kmrplvpidy steelqavqp gapapnlvaa aefakrisnv ntkeeksdae rersrhfydk
      781 ssrdkdrnne dsrnrdeske kipdrdrdre hgqdkvkttd nqklldakql idmipktkee
      841 lfsyeinwnv ydqhalherm rpwiskkite flgeeektlv dyivsgtqeh vkasqmlell
      901 qsildeeaem fvlkmwrmli feikkvetgl alrsrs
//
LOCUS       XP_016692728             765 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692728
VERSION     XP_016692728.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837239.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..765
                     /product="RNA-binding protein 25 isoform X2"
                     /calculated_mol_wt=87825
     Region          51..131
                     /region_name="RRM_RBM25"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 25 and similar proteins; cd12446"
                     /db_xref="CDD:409880"
     Region          <137..705
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          681..754
                     /region_name="PWI"
                     /note="domain in splicing factors; smart00311"
                     /db_xref="CDD:214609"
     CDS             1..765
                     /gene="LOC107909631"
                     /coded_by="XM_016837239.2:822..3119"
                     /db_xref="GeneID:107909631"
ORIGIN      
        1 mirpafpprp pgaigvmptv srppvpgarp iippvirpav pnvtptekpq ttvyigkiap
       61 tvdndfmlsl lrlcgpvksw krpsngtpka fglcdfesae gvlravrlls kfnidgqelv
      121 vnvsqatkey lekyvekkte nakklnepps aesekegena vgdvknesss tsvedpkkns
      181 dsgnrenimd iansgivtde dreadrdase klagmieerl ktnplppppp qtapdgsgks
      241 nsdlpaksrd gnsdidlmrn dgaegkndde ttseskatte ndrpetsspd rrydrsrdre
      301 qdlkrdkere ierlereter ermrkereqr rkieeaerey ekflrdweqr ekdkekqrqy
      361 ekerekerer krkkeiryde eddddedsrk rlrrsvleek rrkrlreked dladrlkeek
      421 eiaeakkrae eeqlqlqqqr dalkllsgrf angaaknvla eepsteskdk aveqhyeres
      481 shenqisgdg nmqngsvdes nvafvsasdt rqsgnaprkl gfglvgsgkr ttvpsvfhee
      541 edddaqkekk mrplvpidys teelqavqpg apapnlvaaa efakrisnvn tkeeksdaer
      601 ersrhfydks srdkdrnned srnrdeskek ipdrdrdreh gqdkvkttdn qklldakqli
      661 dmipktkeel fsyeinwnvy dqhalhermr pwiskkitef lgeeektlvd yivsgtqehv
      721 kasqmlellq sildeeaemf vlkmwrmlif eikkvetgla lrsrs
//
LOCUS       XP_040944879             765 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944879
VERSION     XP_040944879.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088945.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..765
                     /product="RNA-binding protein 25 isoform X2"
                     /calculated_mol_wt=87825
     Region          51..131
                     /region_name="RRM_RBM25"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 25 and similar proteins; cd12446"
                     /db_xref="CDD:409880"
     Region          <137..705
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          681..754
                     /region_name="PWI"
                     /note="domain in splicing factors; smart00311"
                     /db_xref="CDD:214609"
     CDS             1..765
                     /gene="LOC107909631"
                     /coded_by="XM_041088945.1:523..2820"
                     /db_xref="GeneID:107909631"
ORIGIN      
        1 mirpafpprp pgaigvmptv srppvpgarp iippvirpav pnvtptekpq ttvyigkiap
       61 tvdndfmlsl lrlcgpvksw krpsngtpka fglcdfesae gvlravrlls kfnidgqelv
      121 vnvsqatkey lekyvekkte nakklnepps aesekegena vgdvknesss tsvedpkkns
      181 dsgnrenimd iansgivtde dreadrdase klagmieerl ktnplppppp qtapdgsgks
      241 nsdlpaksrd gnsdidlmrn dgaegkndde ttseskatte ndrpetsspd rrydrsrdre
      301 qdlkrdkere ierlereter ermrkereqr rkieeaerey ekflrdweqr ekdkekqrqy
      361 ekerekerer krkkeiryde eddddedsrk rlrrsvleek rrkrlreked dladrlkeek
      421 eiaeakkrae eeqlqlqqqr dalkllsgrf angaaknvla eepsteskdk aveqhyeres
      481 shenqisgdg nmqngsvdes nvafvsasdt rqsgnaprkl gfglvgsgkr ttvpsvfhee
      541 edddaqkekk mrplvpidys teelqavqpg apapnlvaaa efakrisnvn tkeeksdaer
      601 ersrhfydks srdkdrnned srnrdeskek ipdrdrdreh gqdkvkttdn qklldakqli
      661 dmipktkeel fsyeinwnvy dqhalhermr pwiskkitef lgeeektlvd yivsgtqehv
      721 kasqmlellq sildeeaemf vlkmwrmlif eikkvetgla lrsrs
//
LOCUS       XP_016692731             765 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 25 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692731
VERSION     XP_016692731.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837242.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..765
                     /product="RNA-binding protein 25 isoform X2"
                     /calculated_mol_wt=87825
     Region          51..131
                     /region_name="RRM_RBM25"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 25 and similar proteins; cd12446"
                     /db_xref="CDD:409880"
     Region          <137..705
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          681..754
                     /region_name="PWI"
                     /note="domain in splicing factors; smart00311"
                     /db_xref="CDD:214609"
     CDS             1..765
                     /gene="LOC107909631"
                     /coded_by="XM_016837242.2:360..2657"
                     /db_xref="GeneID:107909631"
ORIGIN      
        1 mirpafpprp pgaigvmptv srppvpgarp iippvirpav pnvtptekpq ttvyigkiap
       61 tvdndfmlsl lrlcgpvksw krpsngtpka fglcdfesae gvlravrlls kfnidgqelv
      121 vnvsqatkey lekyvekkte nakklnepps aesekegena vgdvknesss tsvedpkkns
      181 dsgnrenimd iansgivtde dreadrdase klagmieerl ktnplppppp qtapdgsgks
      241 nsdlpaksrd gnsdidlmrn dgaegkndde ttseskatte ndrpetsspd rrydrsrdre
      301 qdlkrdkere ierlereter ermrkereqr rkieeaerey ekflrdweqr ekdkekqrqy
      361 ekerekerer krkkeiryde eddddedsrk rlrrsvleek rrkrlreked dladrlkeek
      421 eiaeakkrae eeqlqlqqqr dalkllsgrf angaaknvla eepsteskdk aveqhyeres
      481 shenqisgdg nmqngsvdes nvafvsasdt rqsgnaprkl gfglvgsgkr ttvpsvfhee
      541 edddaqkekk mrplvpidys teelqavqpg apapnlvaaa efakrisnvn tkeeksdaer
      601 ersrhfydks srdkdrnned srnrdeskek ipdrdrdreh gqdkvkttdn qklldakqli
      661 dmipktkeel fsyeinwnvy dqhalhermr pwiskkitef lgeeektlvd yivsgtqehv
      721 kasqmlellq sildeeaemf vlkmwrmlif eikkvetgla lrsrs
//
LOCUS       XP_016692732             686 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 18 [Gossypium hirsutum].
ACCESSION   XP_016692732
VERSION     XP_016692732.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837243.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..686
                     /product="U-box domain-containing protein 18"
                     /calculated_mol_wt=75669
     Region          50..>142
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          280..331
                     /region_name="RING-Ubox_PUB"
                     /note="U-box domain, a modified RING finger, found in
                     Arabidopsis plant U-box proteins (AtPUB) and similar
                     proteins; cd16664"
                     /db_xref="CDD:438326"
     Site            order(280,283,285..288,307,311,320)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438326"
     Region          413..449
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          416..448
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <426..>663
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Site            order(439,443,447,481,485,489,523,527,531)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          455..492
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          497..532
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          539..576
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..686
                     /gene="LOC107909632"
                     /coded_by="XM_016837243.2:82..2142"
                     /db_xref="GeneID:107909632"
ORIGIN      
        1 miqkssgsgr riltypaihp cdsispstll nslidlggdi csykskvfsv nqrnaretfr
       61 qianlllflq eirdttpdlp hpvilsfsel hltfqkircl ledctsdgtr awmlvnsdra
      121 anqfrivirg latgldvfpl stvdmsneak dlveliirqa rkasfepdpd dkkavkdlmr
      181 ilnhfeegia pdpieirril dylgihkwss cnkevkflds eigtefsnge nitklellcs
      241 lmgfmsycrc vifdtvdfes qhlngqcsni skdlkginvd dlkcpislem msdpvtlssg
      301 htydrcsilk wfrsgnatcp ktgekltste lvpnlvlkgm iqqycaengi pvvvsrgknr
      361 disrtvmags sagegamkml agflinklvn gsreemnkaa feirvltkts ifnrsclves
      421 gtiphllkll lsedsntqen siaallnlsk hskgkcvive negldlivhv lrkglkieaq
      481 qhaaatlfyl asdeenrvli genpeaipgl velvknenhh ckrnalvaif gllvhpenhw
      541 rvlasgvvpl llnllrdser edlvtdslai latlaekidg tvailrrgal qllvgilnts
      601 tsrtgkeycv smllalcvng gldvvarlvk ipslmgslys qlsegtsras kkasaiikil
      661 hqfyennsss asvtpalpre qfvhvw
//
LOCUS       XP_016692733             534 aa            linear   PLN 06-AUG-2024
DEFINITION  benzaldehyde dehydrogenase, mitochondrial isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692733
VERSION     XP_016692733.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837244.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..534
                     /product="benzaldehyde dehydrogenase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=57812
     Region          1..534
                     /region_name="PLN02466"
                     /note="aldehyde dehydrogenase family 2 member"
                     /db_xref="CDD:215259"
     CDS             1..534
                     /gene="LOC107909633"
                     /coded_by="XM_016837244.2:298..1902"
                     /db_xref="GeneID:107909633"
ORIGIN      
        1 maarrissll scslsyssll pkgrfcgvgr vvsgystsag ienpinpsik vhctqlling
       61 nfvdsasgkt fptydprtgd viahvaegda edidravcaa rkafdegpwp kmtayerskv
      121 lfrfadlldk hieelatlet wdngkpyeqs akielpmisr iiryyagwad kihgltipad
      181 gphlvqtihe pigvagqiip wnfpllmfaw kvgpalacgc tivlksaeqt plsalyaakl
      241 lheaglppgv lnvvsgfgpt agaalashmd vdklaftgss etgkivlela sksnlkpvil
      301 elggkspfiv ckdadvdkav elahfalffn qgqccsagsr tyvhedvhde fiekakaral
      361 krsvgdpfka gveqgpqids eqfekilryi rsgiesgail itggdrlgsk gfyiqptvft
      421 nvkedmliaq deifgpvqsi lkfrdmdevi rranstrygl aagvftndld tantlsralk
      481 vgtvwincyd vfdaaipfgg ykmsgqgrek gvhclsnylq vkaivaplkn pawi
//
LOCUS       XP_040944880             425 aa            linear   PLN 06-AUG-2024
DEFINITION  benzaldehyde dehydrogenase, mitochondrial isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944880
VERSION     XP_040944880.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088946.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..425
                     /product="benzaldehyde dehydrogenase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=45749
     Region          1..>423
                     /region_name="PLN02466"
                     /note="aldehyde dehydrogenase family 2 member"
                     /db_xref="CDD:215259"
     CDS             1..425
                     /gene="LOC107909633"
                     /coded_by="XM_041088946.1:178..1455"
                     /db_xref="GeneID:107909633"
ORIGIN      
        1 maarrissll scslsyssll pkgrfcgvgr vvsgystsag ienpinpsik vhctqlling
       61 nfvdsasgkt fptydprtgd viahvaegda edidravcaa rkafdegpwp kmtayerskv
      121 lfrfadlldk hieelatlet wdngkpyeqs akielpmisr iiryyagwad kihgltipad
      181 gphlvqtihe pigvagqiip wnfpllmfaw kvgpalacgc tivlksaeqt plsalyaakl
      241 lheaglppgv lnvvsgfgpt agaalashmd vdklaftgss etgkivlela sksnlkpvil
      301 elggkspfiv ckdadvdkav elahfalffn qgqccsagsr tyvhedvhde fiekakaral
      361 krsvgdpfka gveqgpqids eqfekilryi rsgiesgail itggdrlgsk gfyiqptvft
      421 nvkic
//
LOCUS       XP_016692734             485 aa            linear   PLN 06-AUG-2024
DEFINITION  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [Gossypium
            hirsutum].
ACCESSION   XP_016692734
VERSION     XP_016692734.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837245.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692734.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..485
                     /product="U4/U6 small nuclear ribonucleoprotein Prp31
                     homolog"
                     /calculated_mol_wt=52602
     Region          104..332
                     /region_name="Nop"
                     /note="snoRNA binding domain, fibrillarin; pfam01798"
                     /db_xref="CDD:460335"
     Region          339..457
                     /region_name="Prp31_C"
                     /note="Prp31 C terminal domain; pfam09785"
                     /db_xref="CDD:462898"
     CDS             1..485
                     /gene="LOC107909635"
                     /coded_by="XM_016837245.2:198..1655"
                     /db_xref="GeneID:107909635"
ORIGIN      
        1 matladsfla dldelsdnea dvleeenndv anmeedidgd ladietlnyd dldsvsklqk
       61 sqryidimqk vedalekgsd isnqglvled dpeyqlivdc nglsvdiene iviihnfird
      121 kyrlkfpele slvhhpidya rvvkkignem dltlvdlegl lpsaiimvvs vtasttsgkp
      181 lpedvlqkti dacdralald takknvldfv esrmgyiapn lstivgsava aklmgtaggl
      241 salakmpacn vqllgakkkt lagfstatsq frvgyieqte ifqttppalr sracrllask
      301 atlaaridst rgdplgnagk tlkeeihkki ekwqepppak qpkplpvpds epkkkrggrr
      361 lrkmkeryai tdmrklanrm qfgvpeessl gdglgegygm lgqagsgklr vsigqsklaa
      421 kvakkfkekn ygssgatsgl tsslaftpvq gieltnpqah ahqlgsgtqs tyfsetgtfs
      481 kikrt
//
LOCUS       XP_016692735             347 aa            linear   PLN 06-AUG-2024
DEFINITION  spermidine synthase 1 [Gossypium hirsutum].
ACCESSION   XP_016692735
VERSION     XP_016692735.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837246.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="spermidine synthase 1"
                     /calculated_mol_wt=37832
     Region          46..346
                     /region_name="PLN02366"
                     /note="spermidine synthase"
                     /db_xref="CDD:215208"
     Site            order(139..145,163..164,193..195,213)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..347
                     /gene="LOC107909636"
                     /coded_by="XM_016837246.2:251..1294"
                     /db_xref="GeneID:107909636"
ORIGIN      
        1 maeesgapvs cadlpvkrpr edeengvssa aavvamemea dtnntskevd gissvipgwf
       61 seispmwpge ahslkvekvl fqgksdyqnv mvfqsstygk vlvldgviql terdecayqe
      121 mithlplcsi pnpkkvlvig ggdggvlrev srhssveqid iceidkmvvd vskqyfpdva
      181 vgyddprvkl higdgvaflk avpegtydai ivdssdpigp aqelfekpff esvakalrpg
      241 gvvctqaesi wlhmhiiedi vancrqifkg svnyawttvp typsgvigfm lcstegplvd
      301 fkhpvnpidk deccckskrp lkfynseihs aafclpsfak kvieskp
//
LOCUS       XP_016692738             175 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ21 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692738
VERSION     XP_016692738.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837249.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692738.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="serine/arginine-rich splicing factor RSZ21
                     isoform X1"
                     /calculated_mol_wt=19909
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          89..105
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..175
                     /gene="LOC107909637"
                     /coded_by="XM_016837249.2:154..681"
                     /db_xref="GeneID:107909637"
ORIGIN      
        1 msrvyvgnld prvterdled efrifgvlrs vwvarrppgy afiefddrrd aidaireldg
       61 kngwrvelsh nskggggrgg rrgggedlkc yecgepghfa recrsrygsr glgsgrrrsp
      121 sprrrrspsy ghgrrsyspg rsprrrsisp rrgrsysrsp pyrysrrdsp yangd
//
LOCUS       XP_016692736             175 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ21 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692736
VERSION     XP_016692736.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837247.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692736.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..175
                     /product="serine/arginine-rich splicing factor RSZ21
                     isoform X1"
                     /calculated_mol_wt=19909
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          89..105
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..175
                     /gene="LOC107909637"
                     /coded_by="XM_016837247.2:161..688"
                     /db_xref="GeneID:107909637"
ORIGIN      
        1 msrvyvgnld prvterdled efrifgvlrs vwvarrppgy afiefddrrd aidaireldg
       61 kngwrvelsh nskggggrgg rrgggedlkc yecgepghfa recrsrygsr glgsgrrrsp
      121 sprrrrspsy ghgrrsyspg rsprrrsisp rrgrsysrsp pyrysrrdsp yangd
//
LOCUS       XP_040944881             172 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ21 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944881
VERSION     XP_040944881.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088947.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..172
                     /product="serine/arginine-rich splicing factor RSZ21
                     isoform X2"
                     /calculated_mol_wt=19503
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          89..105
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..172
                     /gene="LOC107909637"
                     /coded_by="XM_041088947.1:128..646"
                     /db_xref="GeneID:107909637"
ORIGIN      
        1 msrvyvgnld prvterdled efrifgvlrs vwvarrppgy afiefddrrd aidaireldg
       61 kngwrvelsh nskggggrgg rrgggedlkc yecgepghfa recrsrygsr glgsgrrrsp
      121 sprrrrspsy ghgrspgrsp rrrsisprrg rsysrsppyr ysrrdspyan gd
//
LOCUS       XP_016692739             172 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/arginine-rich splicing factor RSZ21 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692739
VERSION     XP_016692739.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837250.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692739.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..172
                     /product="serine/arginine-rich splicing factor RSZ21
                     isoform X2"
                     /calculated_mol_wt=19503
     Region          3..71
                     /region_name="RRM_SRSF3_like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; cd12373"
                     /db_xref="CDD:409808"
     Site            order(32,34..36,38,40,42,69,71)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409808"
     Region          89..105
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..172
                     /gene="LOC107909637"
                     /coded_by="XM_016837250.2:162..680"
                     /db_xref="GeneID:107909637"
ORIGIN      
        1 msrvyvgnld prvterdled efrifgvlrs vwvarrppgy afiefddrrd aidaireldg
       61 kngwrvelsh nskggggrgg rrgggedlkc yecgepghfa recrsrygsr glgsgrrrsp
      121 sprrrrspsy ghgrspgrsp rrrsisprrg rsysrsppyr ysrrdspyan gd
//
LOCUS       XP_016692757             871 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-1 complex subunit gamma-2 [Gossypium hirsutum].
ACCESSION   XP_016692757
VERSION     XP_016692757.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837268.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692757.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..871
                     /product="AP-1 complex subunit gamma-2"
                     /calculated_mol_wt=95637
     Region          26..580
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          314..338
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(330..331,334,337..338,367..368,371,374..375,378,
                     406..407,410,413..414,417,439..440,443,446..447)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          350..378
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          388..418
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          425..447
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          758..868
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..871
                     /gene="LOC107909653"
                     /coded_by="XM_016837268.2:319..2934"
                     /db_xref="GeneID:107909653"
ORIGIN      
        1 mnpfssgtrl rdmirairac ktaaeeravv rkecaairas ineddqdyrh rnlaklmfiq
       61 ilgypthfgq meclkliasa gfpekrigyl glmlllderq evlmlvtnsl kqdlnhsnqy
      121 ivglalcalg nicsaemard lspeverllq frdpnirkka alcsiriikk vpdlaenfin
      181 caasllkekh hgvlitgvql cadlckvsse aleyfrkkct eglvrtlrdi vnspyspeyd
      241 isgitdpylh irllkllril gqgdadasdr mtdilaqvat ktesnknagn ailyecveti
      301 msieddgglr vlainilgkf lsnrdnniry valnmlmrat tldaqavqrh ratildcvkd
      361 sdasirkral ellyllvnen nvkplikeli eylevsdqef kgdltakics lvekfsseki
      421 wyidqmlkvl seagnfvkde vwhalifvis nasdlhgytv ralyraflts teqetlvrva
      481 vwcigeygdm lvnnvgmldi edpitvtecd avdavevaik rhtsdlttka maliallkls
      541 srfpssseri kgiivqnkgn lvlelqqrsi efnrilqkhq kirsalverm pvldeatfsg
      601 rragslptai stssgapsnl pngiakpata pipdlldlss ddvpapsssg gdfpqdllgv
      661 dlsptlapsg agkppkastd vlldllsigt ylpvqtgssa sdilsssqdd kalaslssls
      721 anatspvnaa pmmdlldghg pgpqkpkeng qayqslvaye ssslrvmfnf skqpgspqtt
      781 liqatftnls snvyndflfq aavpkflqlh ldpassntlp asgdgsitqn lkvtnsqhgk
      841 kllvmrvria yktnnkdvle erqinnfpqn l
//
LOCUS       XP_016692758             387 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL47 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692758
VERSION     XP_016692758.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837269.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..387
                     /product="RING-H2 finger protein ATL47 isoform X1"
                     /calculated_mol_wt=41879
     Region          151..194
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Site            179..184
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
     CDS             1..387
                     /gene="LOC107909654"
                     /coded_by="XM_016837269.2:505..1668"
                     /db_xref="GeneID:107909654"
ORIGIN      
        1 mswiqsqikl kdgglsyhph svlsspysss ssfssppfsy sndnqkqpns lsssssaski
       61 spavlfiivi laviffisgl lhllvrflmk hrspssvses nrypemsgsd afqrqlqqlf
      121 hlhdsgldqa fidalpvfly keimglkepf dcavclcefl eqdklrllpm cshafhigci
      181 dtwlmsnstc plcrgtlftp glpienpafd leypreenml ssnggsgvsl gpkpsesdig
      241 krvfsvrlgk frssndgsgg evgggegvlr egetsssnld arrcysmgsf qyvvadelqv
      301 alcpsrggng tasmkfvkgr igqtgnssnd gdvkgkrinl tskgesfsvs kiwqsskkgk
      361 flrtsdtigs ssvtvglpwt dsraqvt
//
LOCUS       XP_016692759             357 aa            linear   PLN 06-AUG-2024
DEFINITION  RING-H2 finger protein ATL47 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692759
VERSION     XP_016692759.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837270.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..357
                     /product="RING-H2 finger protein ATL47 isoform X2"
                     /calculated_mol_wt=38476
     CDS             1..357
                     /gene="LOC107909654"
                     /coded_by="XM_016837270.2:493..1566"
                     /db_xref="GeneID:107909654"
ORIGIN      
        1 mswiqsqikl kdgglsyhph svlsspysss ssfssppfsy sndnqkqpns lsssssaski
       61 spavlfiivi laviffisgl lhllvrflmk hrspssvses nrypemsgsd afqrqlqqlf
      121 hlhdsgldqa fidalpvfly keimglkepf dcavclcefl eqdkgtlftp glpienpafd
      181 leypreenml ssnggsgvsl gpkpsesdig krvfsvrlgk frssndgsgg evgggegvlr
      241 egetsssnld arrcysmgsf qyvvadelqv alcpsrggng tasmkfvkgr igqtgnssnd
      301 gdvkgkrinl tskgesfsvs kiwqsskkgk flrtsdtigs ssvtvglpwt dsraqvt
//
LOCUS       XP_040944882             360 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RICE SALT SENSITIVE 3 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944882
VERSION     XP_040944882.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088948.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..360
                     /product="protein RICE SALT SENSITIVE 3 isoform X1"
                     /calculated_mol_wt=41080
     Region          14..214
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     CDS             1..360
                     /gene="LOC107909655"
                     /coded_by="XM_041088948.1:120..1202"
                     /db_xref="GeneID:107909655"
ORIGIN      
        1 meehlsplav thllqhtlrs lcihensqwv yavfwrilpr nypppkqlff hyfyhrwdgq
       61 gaydrsrgnr rnwilvwedg fcnfaasaae insgdchgss vhgssefqhy qglqpelffk
      121 msheiynyge gligkvaadh shkwiykepn eqeinflsaw hnsadshprt weaqfqagik
      181 tialiavreg vvqlgavhkv iedlsyvvll rkkfsyiesl pgvllphpss saypfkvday
      241 gtpeawahfp agttiapppp pefydhfnqp mkitpsmssl eallsklpsv vppqassgyc
      301 eshpqsqfqs sqrpveyigm ekvakeeide eykpeqdmge sstsfsayrr qqqyhqhlsm
//
LOCUS       XP_016692760             350 aa            linear   PLN 06-AUG-2024
DEFINITION  protein RICE SALT SENSITIVE 3 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692760
VERSION     XP_016692760.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837271.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..350
                     /product="protein RICE SALT SENSITIVE 3 isoform X2"
                     /calculated_mol_wt=39641
     Region          14..204
                     /region_name="bHLH-MYC_N"
                     /note="bHLH-MYC and R2R3-MYB transcription factors
                     N-terminal; pfam14215"
                     /db_xref="CDD:464106"
     CDS             1..350
                     /gene="LOC107909655"
                     /coded_by="XM_016837271.2:153..1205"
                     /db_xref="GeneID:107909655"
ORIGIN      
        1 meehlsplav thllqhtlrs lcihensqwv yavfwrilpr nypppkwdgq gaydrsrgnr
       61 rnwilvwedg fcnfaasaae insgdchgss vhgssefqhy qglqpelffk msheiynyge
      121 gligkvaadh shkwiykepn eqeinflsaw hnsadshprt weaqfqagik tialiavreg
      181 vvqlgavhkv iedlsyvvll rkkfsyiesl pgvllphpss saypfkvday gtpeawahfp
      241 agttiapppp pefydhfnqp mkitpsmssl eallsklpsv vppqassgyc eshpqsqfqs
      301 sqrpveyigm ekvakeeide eykpeqdmge sstsfsayrr qqqyhqhlsm
//
LOCUS       XP_016692761             346 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At5g40210 [Gossypium hirsutum].
ACCESSION   XP_016692761
VERSION     XP_016692761.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837272.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..346
                     /product="WAT1-related protein At5g40210"
                     /calculated_mol_wt=37807
     Region          10..339
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..346
                     /gene="LOC107909657"
                     /coded_by="XM_016837272.2:214..1254"
                     /db_xref="GeneID:107909657"
ORIGIN      
        1 mweksvtaim vateflevgl ntvnkaamnk glsdfvlvfy snvlgifmla pciiifyrkr
       61 sppvltwsti ckifllgvls yggqictyig igygsptlas amadltpaft fifsiisrme
      121 kldlgikssq akslgtlvsi tgafvvtlyk glplttsprk ysflhqvlgi phsnwiiggf
      181 flashsvifa iilnvqtwii rrypaemlvt licsiivail ssvvslmvek dpnawkigfn
      241 meliatvyta afavafrsvv hkwalrkkgp iyvsmfkple mvialamgia flgdklylgs
      301 llgaaiiaig fyaviwgqaq eekmvhdaqs snkdpllpnt thtlvv
//
LOCUS       XP_016692762             370 aa            linear   PLN 06-AUG-2024
DEFINITION  WAT1-related protein At1g70260 [Gossypium hirsutum].
ACCESSION   XP_016692762
VERSION     XP_016692762.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837273.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="WAT1-related protein At1g70260"
                     /calculated_mol_wt=40956
     Region          6..336
                     /region_name="PLN00411"
                     /note="nodulin MtN21 family protein; Provisional"
                     /db_xref="CDD:177805"
     CDS             1..370
                     /gene="LOC107909658"
                     /coded_by="XM_016837273.2:290..1402"
                     /db_xref="GeneID:107909658"
ORIGIN      
        1 mveetrrerm sevapfavml imegctialt ilaktaltag ispfvfvvyt navgsilllp
       61 fsflyhrger ieqslftfpl lfriffmglt gvaisqnlaf lglsysspiv vcamgllmpt
      121 isfllsiilr tarldwrsts sqakmigtfi siagaifvel ykgpftrpsp vsldhhlqvi
      181 pklfvfystp drwvlggill aaatlsisvw nivqmgtvkq ypqvmkvass ysvvgtiqcl
      241 vfslimegdl dawklkrkrd llliivtgvf gsiirsnvhi actrmkgpfy vpmfkpfgvv
      301 fatvlgtcff tnslhygsvi gtiivgtgyy avmwgqiree elrkerevek vgdisdlkap
      361 llqenedaqv
//
LOCUS       XP_016692763             195 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 423 [Gossypium hirsutum].
ACCESSION   XP_016692763
VERSION     XP_016692763.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837274.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692763.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="MLP-like protein 423"
                     /calculated_mol_wt=21963
     Region          44..191
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(49,53,66..67,70,74,81,100,102..103,109,112,114,126,
                     128,130,134..135,142,144,146,148,157,159,161,163,175..176,
                     178..179,182..183,185..187)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(89..92,94..98)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..195
                     /gene="LOC107909659"
                     /coded_by="XM_016837274.2:74..661"
                     /db_xref="GeneID:107909659"
ORIGIN      
        1 mrhlettyff cyyiytsmlp gvcqqpfclf lpfsiytian tamassgqlh vdfelkspae
       61 kvwgtirdst tifpqalshd yksiqvlegd gkapgsvrli nyaegspivk vskeriesvd
      121 eaekkyvysi idgdllkyyk tfigkiivvp kgesslvkws cefekaseei pdpsvikefa
      181 vknfkeiddy lhgka
//
LOCUS       XP_040944884             276 aa            linear   PLN 06-AUG-2024
DEFINITION  BTB/POZ domain-containing protein At2g13690 [Gossypium hirsutum].
ACCESSION   XP_040944884
VERSION     XP_040944884.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088950.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..276
                     /product="BTB/POZ domain-containing protein At2g13690"
                     /calculated_mol_wt=31493
     Region          <153..>262
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
     CDS             1..276
                     /gene="LOC107909661"
                     /coded_by="XM_041088950.1:221..1051"
                     /db_xref="GeneID:107909661"
ORIGIN      
        1 mtkkemskpl iariskqvdn inflleilld rqmaeefvdl wvnqenllkl hkraslmvry
       61 elsrvsvilf iamgtrklhc csearsgllq awfgpmlldf gwlqrckkgl dmkaleeamg
      121 qtlltlplkq qyvlfmewfr cfsrngsecp nlskafqiww rrsflrgset havesslelw
      181 ytailvllag yvknatiaid afsiclnfnt wefmicvglf gaaivrvane lgrgnakplk
      241 faiktimses icigmvffil clgccikfpt clqvmn
//
LOCUS       XP_016692765             381 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL28 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016692765
VERSION     XP_016692765.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837276.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..381
                     /product="probable serine/threonine-protein kinase PBL28
                     isoform X1"
                     /calculated_mol_wt=42943
     Region          95..369
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(95..99,103,115,117,149,165..168,172,174,218,220,
                     222..223,225,236,239,257..260)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(95..99,103,115,117,149,165..168,172,218,220,
                     222..223,225,236)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(99,172,174,218,220,222,239,257..260)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(235..242,253..260)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..381
                     /gene="LOC107909662"
                     /coded_by="XM_016837276.2:587..1732"
                     /db_xref="GeneID:107909662"
ORIGIN      
        1 mqldscsicq siqsssidii mpfrlvsawn krrrsnnqdh tdpcilfssw ihkpaeywei
       61 edqtprptkr chgssvftlk emkeatssfs denllgkggf grvykgtlrs gevvaikkme
      121 lpplkeaege refrvevdil srldhpnlvs ligycadgkh rflvyeymqk gnlqdhlngi
      181 sekkidwpsr lkvaigaarg laylhsssdg ripivhrdfk stnvllntnf eakisdfgla
      241 klmpegqetd vtarvlgtfg yfdpeytstg kltlksdvya fgvvllellt grravdlnqg
      301 pndrnlvlqv rhilndrkkl rkvidpemar ssytieciam fanlasrcvr vesrhrpsms
      361 eclkelqlif ctnakglghg f
//
LOCUS       XP_016692766             375 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase PBL28 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016692766
VERSION     XP_016692766.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837277.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..375
                     /product="probable serine/threonine-protein kinase PBL28
                     isoform X2"
                     /calculated_mol_wt=42293
     Region          89..363
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(89..93,97,109,111,143,159..162,166,168,212,214,
                     216..217,219,230,233,251..254)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(89..93,97,109,111,143,159..162,166,212,214,216..217,
                     219,230)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(93,166,168,212,214,216,233,251..254)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(229..236,247..254)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..375
                     /gene="LOC107909662"
                     /coded_by="XM_016837277.2:168..1295"
                     /db_xref="GeneID:107909662"
ORIGIN      
        1 mqldscsicq siqsssidii mpfrlvsawn krrrsnnqdh tdpwihkpae yweiedqtpr
       61 ptkrchgssv ftlkemkeat ssfsdenllg kggfgrvykg tlrsgevvai kkmelpplke
      121 aegerefrve vdilsrldhp nlvsligyca dgkhrflvye ymqkgnlqdh lngisekkid
      181 wpsrlkvaig aarglaylhs ssdgripivh rdfkstnvll ntnfeakisd fglaklmpeg
      241 qetdvtarvl gtfgyfdpey tstgkltlks dvyafgvvll elltgrravd lnqgpndrnl
      301 vlqvrhilnd rkklrkvidp emarssytie ciamfanlas rcvrvesrhr psmseclkel
      361 qlifctnakg lghgf
//
LOCUS       XP_016692768             315 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692768
VERSION     XP_016692768.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837279.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..315
                     /product="uncharacterized protein"
                     /calculated_mol_wt=35946
     Region          201..291
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
     CDS             1..315
                     /gene="LOC107909663"
                     /coded_by="XM_016837279.2:314..1261"
                     /db_xref="GeneID:107909663"
ORIGIN      
        1 maiaaapplk lspyldpqqq prlqtefnpi krvpflssrn pllcvcklhr ynfkcclpss
       61 sstnsvtpaq yysfldesyr gsrvltneel eklkalesfv ylqeleswsl wvrvmrieem
      121 dmtvgllals faesmlmslq yeallrffvk qylierrasm phavtlvgfy reeggkrgee
      181 lagtvevcfd krganasppt ptpprnspyi cnmtvtkelr rrgigwhllk aseelisqmt
      241 sskeiylhcr mideapfnmy ikagynviqt dsifilltlq rrkhlmckkl pvsnsfpepd
      301 msesagerst flnps
//
LOCUS       XP_040944885             444 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ALTERED XYLOGLUCAN 4 [Gossypium hirsutum].
ACCESSION   XP_040944885
VERSION     XP_040944885.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088951.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..444
                     /product="protein ALTERED XYLOGLUCAN 4"
                     /calculated_mol_wt=50352
     Region          86..138
                     /region_name="PMR5N"
                     /note="PMR5 N terminal Domain; pfam14416"
                     /db_xref="CDD:464168"
     Region          139..431
                     /region_name="PC-Esterase"
                     /note="GDSL/SGNH-like Acyl-Esterase family found in Pmr5
                     and Cas1p; pfam13839"
                     /db_xref="CDD:463996"
     CDS             1..444
                     /gene="LOC121214755"
                     /coded_by="XM_041088951.1:265..1599"
                     /db_xref="GeneID:121214755"
ORIGIN      
        1 mgvtsplkgq shsrsltrkl lpyvlyallp iavfrfyfhp fpfplstsdq lphpnriilt
       61 tssssssssp ppssfsreee ianetpcnyt ygrwvhdkmg plyngttcgt ikegqncith
      121 grpdlgylyw rwqpsqcnlp rfdpntffnl lsnkhiafvg dsmarnqles llcmlatasy
      181 pnlvyknged nkfrrwhfas hnitvsvyws pflvkgveks ktgpdhnely vdvvderwgs
      241 dlehidmvvl sighwflhpa vyyeggsvlg chycpglnht eigfydvmrk aiktalkaii
      301 erkstdgngi dvfltsfsps hfegewdkag acpktkpyee gekmvegmda dmrsiaieem
      361 eaakvndkkf kglrletldv tklslmrpdg hpgpymypfp fangvqehvq ndcvhwclpg
      421 pidtwnqivl evirrwsvvs kree
//
LOCUS       XP_016692769             548 aa            linear   PLN 06-AUG-2024
DEFINITION  nucleobase-ascorbate transporter 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692769
VERSION     XP_016692769.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837280.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..548
                     /product="nucleobase-ascorbate transporter 7 isoform X1"
                     /calculated_mol_wt=58576
     Region          50..513
                     /region_name="UraA"
                     /note="Xanthine/uracil permease [Nucleotide transport and
                     metabolism]; COG2233"
                     /db_xref="CDD:441834"
     CDS             1..548
                     /gene="LOC107909664"
                     /coded_by="XM_016837280.2:913..2559"
                     /db_xref="GeneID:107909664"
ORIGIN      
        1 magggggggg gggggggggg aapppkqdel qphpvkeqlp gvaycitspp pwpeaillgf
       61 qhylvmlgtt vliptslvpq mgggneekak miqtllfvag vntllqtlfg trlpaviggs
      121 ytympttisi ilagrytdiv npqekfekim rgiqgaliva stlqivlgfs glwrnvarfl
      181 splsavplva lsgfglyefg fpvlakciei glpeiilllv fsqyiphitr gerqvfdrfa
      241 vifsvvivwi yahlltvgga yknsgpktqi scrtdragii gaspwirvpy pfqwgaptfd
      301 ageafammaa sfvalvestg tflavaryas atpmppsils rgigwqgigi lfsgifgtgn
      361 gssvsvengg llamtrvgsr rvvqisagfm iffsilgkfg avfasipapi iaalyclffg
      421 yvgsgglsll qfcnlnnfki kfilgfsvfm glsipqyfne ytaingfgpv htgarwfndm
      481 invpfsseaf vagslamfld vtlhgkenat krergmhlwe kfksfkkdar seefyalpfn
      541 lnkffpsv
//
LOCUS       XP_040944887             492 aa            linear   PLN 06-AUG-2024
DEFINITION  nucleobase-ascorbate transporter 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944887
VERSION     XP_040944887.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088953.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..492
                     /product="nucleobase-ascorbate transporter 7 isoform X2"
                     /calculated_mol_wt=52036
     Region          50..454
                     /region_name="UraA"
                     /note="Xanthine/uracil permease [Nucleotide transport and
                     metabolism]; COG2233"
                     /db_xref="CDD:441834"
     CDS             1..492
                     /gene="LOC107909664"
                     /coded_by="XM_041088953.1:913..2391"
                     /db_xref="GeneID:107909664"
ORIGIN      
        1 magggggggg gggggggggg aapppkqdel qphpvkeqlp gvaycitspp pwpeaillgf
       61 qhylvmlgtt vliptslvpq mgggneekak miqtllfvag vntllqtlfg trlpaviggs
      121 ytympttisi ilagrytdiv npqekfekim rgiqgaliva stlqivlgfs glwrnvarfl
      181 splsavplva lsgfglyefg fpvlakciei glpeiilllv fsqyiphitr gerqvfdrfa
      241 vifsvvivwi yahlltvgga yknsgpktqi scrtdragii gaspwirvpy pfqwgaptfd
      301 ageafammaa sfvalvestg tflavaryas atpmppsils rgigwqgigi lfsgifgtgn
      361 gssvsvengg llamtrvgsr rvvqisagfm iffsilgkfg avfasipapi iaalyclffg
      421 yvgsgglsll qfcnlnnfki kfilgfsvfm glsipqyfne ytaingfgpv htgarwfndm
      481 invlfsfcss tt
//
LOCUS       XP_016692722             164 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692722
VERSION     XP_016692722.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837233.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..164
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18373
     Region          1..161
                     /region_name="PADRE"
                     /note="PADRE domain; pfam14009"
                     /db_xref="CDD:464065"
     CDS             1..164
                     /gene="LOC107909629"
                     /coded_by="XM_016837233.2:162..656"
                     /db_xref="GeneID:107909629"
ORIGIN      
        1 mgncqaidaa alviqhpcgr ierfywpila sevmrtnpgh yvsliiplpp sedanqddka
       61 vrftrvkllr psdtlalgha yrlvtsqevm evlkakkyak ttrqhlesse klqheqgnnr
      121 ssesyqsqvt kherrrprts pantaamssk swqpslqsis efgs
//
LOCUS       XP_016692721             328 aa            linear   PLN 06-AUG-2024
DEFINITION  cyclin-D1-1 [Gossypium hirsutum].
ACCESSION   XP_016692721
VERSION     XP_016692721.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837232.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..328
                     /product="cyclin-D1-1"
                     /calculated_mol_wt=36674
     Region          74..172
                     /region_name="CYCLIN_AtCycD-like_rpt1"
                     /note="first cyclin box found in plant cyclin-delta
                     family; cd20543"
                     /db_xref="CDD:410246"
     Region          177..267
                     /region_name="CYCLIN_AtCycD-like_rpt2"
                     /note="second cyclin box found in plant cyclin-delta
                     family; cd20544"
                     /db_xref="CDD:410247"
     CDS             1..328
                     /gene="LOC107909628"
                     /coded_by="XM_016837232.2:410..1396"
                     /db_xref="GeneID:107909628"
ORIGIN      
        1 mslscsdrft dllcaedsde vlsgespacs seldsqasci eessidgfie detnfvpgfd
       61 ylarfqcqsl dasareasva wilkvqayyn lqpltaylsv nyldrflysr rlpqasgwpl
      121 qllstaclsl aakmeeplvp slldlqvega kyifepktiq rmellvltvl dwrlrsvtpf
      181 sfidffackl dptgtflafl isratdiils nikeasfley rpssiaaaai lcaaneipnl
      241 slfnpehaes wcdglskeki lscyrlmqel vvdnarrkpp kmlpqlrvsi rgrmrssdss
      301 sssssspsyk rrklnnclrv ddddrnsk
//
LOCUS       XP_016692720             182 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PLASTID REDOX INSENSITIVE 2, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016692720
VERSION     XP_016692720.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837231.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..182
                     /product="protein PLASTID REDOX INSENSITIVE 2,
                     chloroplastic"
                     /calculated_mol_wt=19787
     CDS             1..182
                     /gene="LOC107909626"
                     /coded_by="XM_016837231.2:91..639"
                     /db_xref="GeneID:107909626"
ORIGIN      
        1 mgslskalls stlrslpsfs spptpffsfs ssysftpnsp sfafkssfts sltskaptpn
       61 slsfssttfi ckaaeykfpd pipefadaet dkfrshllnk lskkdtyeds veevvgicte
      121 ifstflhtey ggpgtllvip fidmadtine rglpggpqaa raavkwaqdh vdkdwkewtg
      181 tn
//
LOCUS       XP_016692713             581 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 22 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692713
VERSION     XP_016692713.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837224.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..581
                     /product="DEAD-box ATP-dependent RNA helicase 22 isoform
                     X1"
                     /calculated_mol_wt=63734
     Region          79..573
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..581
                     /gene="LOC107909623"
                     /coded_by="XM_016837224.2:134..1879"
                     /db_xref="GeneID:107909623"
ORIGIN      
        1 milrrstaml hsfslstttp kllshftpsf flctsalspr iriwlnqsys rrtrafssav
       61 vtasspkntg tdtffaedtv swqslglsdr isqalsnagf drpslvqaac mpsilsgkdv
      121 viaaetgsgk tygylvplid klygarhdad ndlekatvss rtfsivlcpn vllceqvvrm
      181 andlsggdgr pllrvaavcg rqgwpvnepd vivstpvall nsidpkkhhr sdfiravkyv
      241 vfdeadmlls ggfenhvirl ihmlrfdekl lsrvnkagse npvepssdsv shfdfegeed
      301 mqnesiseae emsegdvdae dlmeetqtlp vkrkdwrrvr knyerskqyi fvaatlpvng
      361 kktagavlkk mfpdanwvsg sylhqpnprl kekwievttd nqvdalieav kqfgakasdh
      421 gagvsrtmvf gntveaveav anilqragie cyryhtglsl aeraeslddf rakggifvct
      481 daaargvdip nvshviqadf atsavdflhr vgrtaragqf gvvtslynes nrdlvnaira
      541 agklgqpvea afsrkrsfrn klkkragsne agqistaefm v
//
LOCUS       XP_016692714             580 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 22 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692714
VERSION     XP_016692714.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837225.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..580
                     /product="DEAD-box ATP-dependent RNA helicase 22 isoform
                     X2"
                     /calculated_mol_wt=63663
     Region          79..571
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..580
                     /gene="LOC107909623"
                     /coded_by="XM_016837225.2:134..1876"
                     /db_xref="GeneID:107909623"
ORIGIN      
        1 milrrstaml hsfslstttp kllshftpsf flctsalspr iriwlnqsys rrtrafssav
       61 vtasspkntg tdtffaedtv swqslglsdr isqalsnagf drpslvqaac mpsilsgkdv
      121 viaaetgsgk tygylvplid klygarhdad ndlekatvss rtfsivlcpn vllceqvvrm
      181 andlsggdgr pllrvaavcg rqgwpvnepd vivstpvall nsidpkkhhr sdfiravkyv
      241 vfdeadmlls ggfenhvirl ihmlrfdekl lsrvnkagse npvepssdsv shfdfegeed
      301 mqnesiseae emsegdvdae dlmeetqtlp vkrkdwrrvr knyerskqyi fvaatlpvng
      361 kktagavlkk mfpdanwvsg sylhqpnprl kekwievttd nqvdalieav kqfgakasdh
      421 gagvsrtmvf gntveaveav anilqragie cyryhtglsl aeraeslddf rakggifvct
      481 daaargvdip nvshviqadf atsavdflhr vgrtaragqf gvvtslynes nrdlvnaira
      541 agklgqpvea afsrkrsfrn klkkrgsnea gqistaefmv
//
LOCUS       XP_040944888             464 aa            linear   PLN 06-AUG-2024
DEFINITION  DEAD-box ATP-dependent RNA helicase 22 isoform X3 [Gossypium
            hirsutum].
ACCESSION   XP_040944888
VERSION     XP_040944888.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088954.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..464
                     /product="DEAD-box ATP-dependent RNA helicase 22 isoform
                     X3"
                     /calculated_mol_wt=52116
     Region          <92..456
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          273..410
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(369,371,396,399..400)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     CDS             1..464
                     /gene="LOC107909623"
                     /coded_by="XM_041088954.1:105..1499"
                     /db_xref="GeneID:107909623"
ORIGIN      
        1 mvlgmmrtmi wrkllflhvp splffaqmyc svnkwfewlm ifqavmvdhf selqrcvvdr
       61 cmyifgivpf lliksdghky dpllqgwpvn epdvivstpv allnsidpkk hhrsdfirav
      121 kyvvfdeadm llsggfenhv irlihmlrfd ekllsrvnka gsenpvepss dsvshfdfeg
      181 eedmqnesis eaeemsegdv daedlmeetq tlpvkrkdwr rvrknyersk qyifvaatlp
      241 vngkktagav lkkmfpdanw vsgsylhqpn prlkekwiev ttdnqvdali eavkqfgaka
      301 sdhgagvsrt mvfgntveav eavanilqra giecyryhtg lslaeraesl ddfrakggif
      361 vctdaaargv dipnvshviq adfatsavdf lhrvgrtara gqfgvvtsly nesnrdlvna
      421 iraagklgqp veaafsrkrs frnklkkrag sneagqista efmv
//
LOCUS       XP_040944889              79 aa            linear   PLN 06-AUG-2024
DEFINITION  mitochondrial outer membrane protein porin of 34 kDa-like
            [Gossypium hirsutum].
ACCESSION   XP_040944889
VERSION     XP_040944889.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088955.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..79
                     /product="mitochondrial outer membrane protein porin of 34
                     kDa-like"
                     /calculated_mol_wt=8709
     CDS             1..79
                     /gene="LOC107908252"
                     /coded_by="XM_041088955.1:72..311"
                     /db_xref="GeneID:107908252"
ORIGIN      
        1 mgfllfllqc ffslskyffi ffvntgkkgc clivcsptgv aitsagtkkc dlfladvntq
       61 lksrnvrtdi kvdinfnin
//
LOCUS       XP_016692710             411 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 16 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692710
VERSION     XP_016692710.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837221.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692710.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..411
                     /product="chaperone protein dnaJ 16 isoform X1"
                     /calculated_mol_wt=46650
     Region          14..>91
                     /region_name="PRK10767"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:236757"
     Region          18..>175
                     /region_name="PRK14285"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:172773"
     CDS             1..411
                     /gene="LOC107909622"
                     /coded_by="XM_016837221.2:373..1608"
                     /db_xref="GeneID:107909622"
ORIGIN      
        1 mpphrsksek ndgmakqlrr dpyevlgvsr nstdqeiksa yrkmalkyhp dkngndpvaa
       61 dmfkevtfsy nilsdpdkrh qydtagfeav eaenqeleld lsslgavntm faalfsklgv
      121 pikttvsatv leealngvvt iqtlllgqpv srkvekqcah fysveiteee ardgfvcrvq
      181 ssdkskfkll yfdleenggl slalqedsak tgkvtsagmy flgfpvyrld qtvnsvaaak
      241 dpdtaffkkl dgfqpceite lkpgthffav ygdnffksvs ytieaictap fieekenlra
      301 veaeilskrv elskfeteyr evlaqftemt trytkemqei dellkqrnei hasytmipps
      361 krsssrsrsk gvsreakege vrdrkhstrd rtkkkrwyni hlkidkrkqp c
//
LOCUS       XP_040944890             411 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 16 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944890
VERSION     XP_040944890.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088956.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..411
                     /product="chaperone protein dnaJ 16 isoform X1"
                     /calculated_mol_wt=46650
     Region          14..>91
                     /region_name="PRK10767"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:236757"
     Region          18..>175
                     /region_name="PRK14285"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:172773"
     CDS             1..411
                     /gene="LOC107909622"
                     /coded_by="XM_041088956.1:355..1590"
                     /db_xref="GeneID:107909622"
ORIGIN      
        1 mpphrsksek ndgmakqlrr dpyevlgvsr nstdqeiksa yrkmalkyhp dkngndpvaa
       61 dmfkevtfsy nilsdpdkrh qydtagfeav eaenqeleld lsslgavntm faalfsklgv
      121 pikttvsatv leealngvvt iqtlllgqpv srkvekqcah fysveiteee ardgfvcrvq
      181 ssdkskfkll yfdleenggl slalqedsak tgkvtsagmy flgfpvyrld qtvnsvaaak
      241 dpdtaffkkl dgfqpceite lkpgthffav ygdnffksvs ytieaictap fieekenlra
      301 veaeilskrv elskfeteyr evlaqftemt trytkemqei dellkqrnei hasytmipps
      361 krsssrsrsk gvsreakege vrdrkhstrd rtkkkrwyni hlkidkrkqp c
//
LOCUS       XP_016692711             395 aa            linear   PLN 06-AUG-2024
DEFINITION  chaperone protein dnaJ 16 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692711
VERSION     XP_016692711.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837222.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692711.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..395
                     /product="chaperone protein dnaJ 16 isoform X2"
                     /calculated_mol_wt=44859
     Region          14..>91
                     /region_name="PRK10767"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:236757"
     Region          18..>175
                     /region_name="PRK14285"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:172773"
     CDS             1..395
                     /gene="LOC107909622"
                     /coded_by="XM_016837222.2:353..1540"
                     /db_xref="GeneID:107909622"
ORIGIN      
        1 mpphrsksek ndgmakqlrr dpyevlgvsr nstdqeiksa yrkmalkyhp dkngndpvaa
       61 dmfkevtfsy nilsdpdkrh qydtagfeav eaenqeleld lsslgavntm faalfsklgv
      121 pikttvsatv leealngvvt iqtlllgqpv srkvekqcah fysveiteee ardgfvcrvq
      181 ssdkskfkll yfdleenggl slalqedsak tgkvtsagmy flgfpvyrld qtvnsvaaak
      241 dpdtaffkkl dgfqpcdnff ksvsytieai ctapfieeke nlraveaeil skrvelskfe
      301 teyrevlaqf temttrytke mqeidellkq rneihasytm ippskrsssr srskgvsrea
      361 kegevrdrkh strdrtkkkr wynihlkidk rkqpc
//
LOCUS       XP_016692709             239 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein 5 [Gossypium hirsutum].
ACCESSION   XP_016692709
VERSION     XP_016692709.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837220.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..239
                     /product="zinc finger protein 5"
                     /calculated_mol_wt=26431
     Region          74..99
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..239
                     /gene="LOC107909621"
                     /coded_by="XM_016837220.2:358..1077"
                     /db_xref="GeneID:107909621"
ORIGIN      
        1 mekdacdcen gysqagfsve kklrlfgfel npsnsngdsm kvcgegdesv nssntissta
       61 kekssmvead dkkfecqycf kefansqalg ghqnahkker mkkkrlqlqa kraslncylq
      121 pfqnslgfgs pwyydspaya tadftpyees qisfsqfeqd shfngshasn lyslpsemip
      181 fqrdssmftl iqgdrsrdnr pvfkpssstp tkqscktldl qlglglqqst iqsssgggi
//
LOCUS       XP_040944891             413 aa            linear   PLN 06-AUG-2024
DEFINITION  protein JINGUBANG [Gossypium hirsutum].
ACCESSION   XP_040944891
VERSION     XP_040944891.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088957.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..413
                     /product="protein JINGUBANG"
                     /calculated_mol_wt=45854
     Region          62..407
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(69,84,88,94..95,110..111,129,133,139..140,184..185,
                     202,207,213..214,228,244,249,255,260,272..273,291,295,
                     301..302,322..323,338,343,349..350,365..366,396,400,
                     406..407)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          73..112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..156
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          190..225
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..269
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          277..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..349
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..413
                     /gene="LOC107909618"
                     /coded_by="XM_041088957.1:170..1411"
                     /db_xref="GeneID:107909618"
ORIGIN      
        1 mgilpchlsc hrndesqsgs yhlhsesstp sissqpslps vpslastshr hdektpaihh
       61 kciatlknhs yvftlalagk vlydgssnge irawrldsse hgdrtdnivv atsnsavksl
      121 vvlgdklisa hqdnkirvwk ihnhehhkyk clatlptlnd rflrcfsekn yvqvrrhkkc
      181 twihhvdtvs alaistdcsl lysaswdrtf kiwrtsdfkc lesvqnahdd ainaivlsrd
      241 gfvhtgsadk rikvwkkhas knnhslvltl ekhksavnal alsndgtvly sgacdrsilv
      301 wereseggdg ewrmvllgal rghtkailcl avvtdlicsg sadktmriwr rgidksyccl
      361 avleghtrpv kcltcntnte eeeegaseti tymvcsgsld ydikvwqvsa svl
//
LOCUS       XP_040944892             330 aa            linear   PLN 06-AUG-2024
DEFINITION  non-functional NADPH-dependent codeinone reductase 2 [Gossypium
            hirsutum].
ACCESSION   XP_040944892
VERSION     XP_040944892.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088958.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..330
                     /product="non-functional NADPH-dependent codeinone
                     reductase 2"
                     /calculated_mol_wt=36769
     Region          22..303
                     /region_name="AKR_AKR4A_4B"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); cd19124"
                     /db_xref="CDD:381350"
     Site            order(32..34,60,65,95,128..129,174..175,196,222..228,255,
                     270..273,278,282)
                     /site_type="active"
                     /db_xref="CDD:381350"
     Site            order(60,65,95,128)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
     CDS             1..330
                     /gene="LOC107909617"
                     /coded_by="XM_041088958.1:331..1323"
                     /db_xref="GeneID:107909617"
ORIGIN      
        1 mdgcleasls plsipeyvlg csgrrmpllg fgtaasppvg sqftktailq aielgyrhfd
       61 taslygteqp lgeaileaia vgliksrdel fitsklwcsd ahgelvlpal qrslknlrle
      121 yldlylihwp vsskpgiyef pikredflam dfkavwkame dcqrlgltks igvsnfsckk
      181 lgdilafaki ppavnqveln plwqqkklre fckangillt ayaplgaqgt iwgsnrvlec
      241 ellkeiakqk gktvaqiclr wayeqgigil vksfnkdrmk snleifnwsl sqedvkkind
      301 ipqsrlcsgq dyiskygpfn ttqelwdgei
//
LOCUS       XP_016692702             324 aa            linear   PLN 06-AUG-2024
DEFINITION  non-functional NADPH-dependent codeinone reductase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016692702
VERSION     XP_016692702.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837213.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="non-functional NADPH-dependent codeinone
                     reductase 2"
                     /calculated_mol_wt=36171
     Region          12..297
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(22..24,53,58,88,121,168..169,190,216..222,249,
                     264..267,272,275..276)
                     /site_type="active"
                     /db_xref="CDD:381350"
     Site            order(53,58,88,121)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
     CDS             1..324
                     /gene="LOC107909615"
                     /coded_by="XM_016837213.2:200..1174"
                     /db_xref="GeneID:107909615"
ORIGIN      
        1 mgsipdyvlr wsgqrmpvvg fgtaseiveg sdfftvtkqa vlqaiklgyr hfdtaslygs
       61 eqplgeaive alslgliksr nelfitsklw ctqaygdlvl palktslqnl kldyldlyli
      121 hwpiclkqrk egvsggkeyd lfpmdfssvw aamedcqrlg ltksiglsnf tckkvadvls
      181 iakippvvnq velnplwqqk klkdfchgng illqaysplg avgtkwgsnr vmecevlkei
      241 akvkgktvaq vclrwayeeg vilivksfna ermkqnleim dwslsedelk miqhipqsrg
      301 iqaeafvses gpfktleelw dgei
//
LOCUS       XP_016692700             324 aa            linear   PLN 06-AUG-2024
DEFINITION  non-functional NADPH-dependent codeinone reductase 2 [Gossypium
            hirsutum].
ACCESSION   XP_016692700
VERSION     XP_016692700.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837211.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="non-functional NADPH-dependent codeinone
                     reductase 2"
                     /calculated_mol_wt=35956
     Region          16..297
                     /region_name="AKR_AKR4A_4B"
                     /note="AKR4A and AKR4B families of aldo-keto reductase
                     (AKR); cd19124"
                     /db_xref="CDD:381350"
     Site            order(26..28,54,59,89,122..123,168..169,190,216..222,249,
                     264..267,272,276)
                     /site_type="active"
                     /db_xref="CDD:381350"
     Site            order(54,59,89,122)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381350"
     CDS             1..324
                     /gene="LOC107909614"
                     /coded_by="XM_016837211.2:134..1108"
                     /db_xref="GeneID:107909614"
ORIGIN      
        1 mgstsfgipe hrfgsngekm pvlgfgtavf ppvgaeatkm ailqsiklgy rhfdtaakyg
       61 seqplgeaiq ealsigliqs rdelfittkl wcgdahgdlv vpalkrslqn lklecldlfl
      121 ihwpvsckpg tyefpikeen flpmdfnsvw aameecqrln ltksigvsnf sckkltdila
      181 ianippavnq vemnpmwqqk klrefcrang ifltaysplg angtfwgsdr vlecevlkei
      241 akakgktaaq vslrwiheqg vgvivksfng ermkqnlgif dwsldedelk kidelpqsrg
      301 vtgvaytsky gpfrtvediw dgem
//
LOCUS       XP_016692699             375 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger MYND domain-containing protein 15 [Gossypium hirsutum].
ACCESSION   XP_016692699
VERSION     XP_016692699.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837210.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692699.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..375
                     /product="zinc finger MYND domain-containing protein 15"
                     /calculated_mol_wt=42060
     Region          11..45
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          163..355
                     /region_name="MSS51_C"
                     /note="MSS51 C-terminal domain; pfam20179"
                     /db_xref="CDD:466330"
     CDS             1..375
                     /gene="LOC107909613"
                     /coded_by="XM_016837210.2:54..1181"
                     /db_xref="GeneID:107909613"
ORIGIN      
        1 mecagkgsgt rclgparkrc grcgavsycs ashqishwkv hreecerleq qmknldllnd
       61 fpftfsqest vqisekqetr csflrkrgih qvglwvcecr cgasvtsfgn srlesdtwnl
      121 pnilcpcrgp sspiakalcs wkdyyewrci pfqspvslll hwpltvyhsi qlaglgslts
      181 eisklcihyl gpekellqla vfgelralfp gvfvqielig pavphhrdgd kidlhsyahc
      241 ieqdcdcryk nentscsich tssavtlqlh rgyyherfld isedshphlv iapnagiaay
      301 aswlptieli keinvpavfs dyceeacnla accinavtnq pprlpiqlnp frqpmvveds
      361 plhlpcysnc flfam
//
LOCUS       XP_016692698             802 aa            linear   PLN 06-AUG-2024
DEFINITION  formin-like protein 4 [Gossypium hirsutum].
ACCESSION   XP_016692698
VERSION     XP_016692698.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837209.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692698.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..802
                     /product="formin-like protein 4"
                     /calculated_mol_wt=87244
     Region          337..743
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..802
                     /gene="LOC107909612"
                     /coded_by="XM_016837209.2:199..2607"
                     /db_xref="GeneID:107909612"
ORIGIN      
        1 mavmfqtlis lnllvvffis vlpfsssqss pqnievffpt qtppptpqpi spppplrppe
       61 spppipppss ssssgdddns tiakavaata gstiviaavf ffcirryvla qrkservgns
      121 sqggqprvpp defarvngni kglivdengl dvlywrqlqn gdnkiefrqe vlhvpkdeee
      181 ggggmvrkgs rskkvepane ipllrgksst shvpppdddd ssenmgpltp ppsshgivlk
      241 avekmeaplq skfvpppppl riqsnkspvt pqpppppppp yrtppppvpa kgpapppppp
      301 fnrvggstts skpppaardk sstgkpgess gdgennqvkl kplhwdkvnk knadhsmvwd
      361 kinggsfkfd ddlmealfgy vatnrksptg dssskntqsv nngspsqimv ldarksqnia
      421 ivlkslalsr relldalneg qgleadtlek llriapteee qsqildfdgd ptrladadsf
      481 lfhilkalps aftrlnamqf rsnydleilh mkeslqalel gckelrsqrl fmklleailk
      541 agnrmnagta rgnaqafnlm sllklsdvks tdgkttllhf vveevvrseg kkcfisrshs
      601 ltrsssrsss sisgnstske drekeyvtlg lpvvgglsae ftnvkkaaai dfkifsgtcs
      661 alaarvaeik qlvlqcmadg kggfvqemkg fiedaeeelk vikeeqkrvm dvvkrtteyy
      721 qagaskdpfq vfvivkdfla mvdqvcveia rnqqrrksst anygsqspns qesrtkmrfp
      781 vlpanfmadk srnnssnsda ds
//
LOCUS       XP_016692695             490 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692695
VERSION     XP_016692695.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837206.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692695.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="protein WVD2-like 7 isoform X1"
                     /calculated_mol_wt=54249
     Region          403..471
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..490
                     /gene="LOC107909611"
                     /coded_by="XM_016837206.2:498..1970"
                     /db_xref="GeneID:107909611"
ORIGIN      
        1 mgesitveas seevkikgmv ssnpelevsv sfgrfendsl swekwstfsp nkyleevekc
       61 atpgsvaqkk affeehykki aarkaellaq dkpmetsshy hnagdlvhqc sdegykqetn
      121 lvneeepqia tpcqnswvee lkqkidstvq seekqeimgs ivespglnkp eetapeeeme
      181 tlskgsqdvk elsqrsenvi entpkikdkn lklgqsaksh kitaenkern dsrikkkpas
      241 pvtktpqvst srtskqtltp ttssasrtrs ktgttlsyss pktknpsveq skklaprslh
      301 msislgpsss gpspltatrk slimekmgdk divkrafktf qsnynqlkps sqeqspaakp
      361 vptkgresrl stlttpqken ggsskvssme kknakaapsy sglksderpe rrkelskkle
      421 gksngreaer knlqtkskdn rdaeikklrq slnfkatplp gfyhgqrtsk spldkigsks
      481 dihwqpgflg
//
LOCUS       XP_040944895             490 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944895
VERSION     XP_040944895.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088961.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="protein WVD2-like 7 isoform X1"
                     /calculated_mol_wt=54249
     Region          403..471
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..490
                     /gene="LOC107909611"
                     /coded_by="XM_041088961.1:425..1897"
                     /db_xref="GeneID:107909611"
ORIGIN      
        1 mgesitveas seevkikgmv ssnpelevsv sfgrfendsl swekwstfsp nkyleevekc
       61 atpgsvaqkk affeehykki aarkaellaq dkpmetsshy hnagdlvhqc sdegykqetn
      121 lvneeepqia tpcqnswvee lkqkidstvq seekqeimgs ivespglnkp eetapeeeme
      181 tlskgsqdvk elsqrsenvi entpkikdkn lklgqsaksh kitaenkern dsrikkkpas
      241 pvtktpqvst srtskqtltp ttssasrtrs ktgttlsyss pktknpsveq skklaprslh
      301 msislgpsss gpspltatrk slimekmgdk divkrafktf qsnynqlkps sqeqspaakp
      361 vptkgresrl stlttpqken ggsskvssme kknakaapsy sglksderpe rrkelskkle
      421 gksngreaer knlqtkskdn rdaeikklrq slnfkatplp gfyhgqrtsk spldkigsks
      481 dihwqpgflg
//
LOCUS       XP_040944896             490 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944896
VERSION     XP_040944896.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088962.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="protein WVD2-like 7 isoform X1"
                     /calculated_mol_wt=54249
     Region          403..471
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..490
                     /gene="LOC107909611"
                     /coded_by="XM_041088962.1:629..2101"
                     /db_xref="GeneID:107909611"
ORIGIN      
        1 mgesitveas seevkikgmv ssnpelevsv sfgrfendsl swekwstfsp nkyleevekc
       61 atpgsvaqkk affeehykki aarkaellaq dkpmetsshy hnagdlvhqc sdegykqetn
      121 lvneeepqia tpcqnswvee lkqkidstvq seekqeimgs ivespglnkp eetapeeeme
      181 tlskgsqdvk elsqrsenvi entpkikdkn lklgqsaksh kitaenkern dsrikkkpas
      241 pvtktpqvst srtskqtltp ttssasrtrs ktgttlsyss pktknpsveq skklaprslh
      301 msislgpsss gpspltatrk slimekmgdk divkrafktf qsnynqlkps sqeqspaakp
      361 vptkgresrl stlttpqken ggsskvssme kknakaapsy sglksderpe rrkelskkle
      421 gksngreaer knlqtkskdn rdaeikklrq slnfkatplp gfyhgqrtsk spldkigsks
      481 dihwqpgflg
//
LOCUS       XP_016692696             490 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692696
VERSION     XP_016692696.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837207.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692696.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="protein WVD2-like 7 isoform X1"
                     /calculated_mol_wt=54249
     Region          403..471
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..490
                     /gene="LOC107909611"
                     /coded_by="XM_016837207.2:245..1717"
                     /db_xref="GeneID:107909611"
ORIGIN      
        1 mgesitveas seevkikgmv ssnpelevsv sfgrfendsl swekwstfsp nkyleevekc
       61 atpgsvaqkk affeehykki aarkaellaq dkpmetsshy hnagdlvhqc sdegykqetn
      121 lvneeepqia tpcqnswvee lkqkidstvq seekqeimgs ivespglnkp eetapeeeme
      181 tlskgsqdvk elsqrsenvi entpkikdkn lklgqsaksh kitaenkern dsrikkkpas
      241 pvtktpqvst srtskqtltp ttssasrtrs ktgttlsyss pktknpsveq skklaprslh
      301 msislgpsss gpspltatrk slimekmgdk divkrafktf qsnynqlkps sqeqspaakp
      361 vptkgresrl stlttpqken ggsskvssme kknakaapsy sglksderpe rrkelskkle
      421 gksngreaer knlqtkskdn rdaeikklrq slnfkatplp gfyhgqrtsk spldkigsks
      481 dihwqpgflg
//
LOCUS       XP_016692697             472 aa            linear   PLN 06-AUG-2024
DEFINITION  protein WVD2-like 7 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692697
VERSION     XP_016692697.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837208.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692697.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..472
                     /product="protein WVD2-like 7 isoform X2"
                     /calculated_mol_wt=52373
     Region          385..453
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..472
                     /gene="LOC107909611"
                     /coded_by="XM_016837208.2:758..2176"
                     /db_xref="GeneID:107909611"
ORIGIN      
        1 mvssnpelev svsfgrfend slswekwstf spnkyleeve kcatpgsvaq kkaffeehyk
       61 kiaarkaell aqdkpmetss hyhnagdlvh qcsdegykqe tnlvneeepq iatpcqnswv
      121 eelkqkidst vqseekqeim gsivespgln kpeetapeee metlskgsqd vkelsqrsen
      181 vientpkikd knlklgqsak shkitaenke rndsrikkkp aspvtktpqv stsrtskqtl
      241 tpttssasrt rsktgttlsy sspktknpsv eqskklaprs lhmsislgps ssgpspltat
      301 rkslimekmg dkdivkrafk tfqsnynqlk pssqeqspaa kpvptkgres rlstlttpqk
      361 enggsskvss mekknakaap sysglksder perrkelskk legksngrea erknlqtksk
      421 dnrdaeikkl rqslnfkatp lpgfyhgqrt skspldkigs ksdihwqpgf lg
//
LOCUS       XP_016692693             374 aa            linear   PLN 06-AUG-2024
DEFINITION  probable galacturonosyltransferase-like 9 [Gossypium hirsutum].
ACCESSION   XP_016692693
VERSION     XP_016692693.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837204.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..374
                     /product="probable galacturonosyltransferase-like 9"
                     /calculated_mol_wt=42116
     Region          71..329
                     /region_name="Glyco_transf_8"
                     /note="Glycosyl transferase family 8; pfam01501"
                     /db_xref="CDD:279798"
     Site            order(75,77,106,179,181)
                     /site_type="active"
                     /db_xref="CDD:133051"
     CDS             1..374
                     /gene="LOC107909609"
                     /coded_by="XM_016837204.2:405..1529"
                     /db_xref="GeneID:107909609"
ORIGIN      
        1 mrsifhaaaa vfllhffltv tfsvgirtig ggdgsgpgfg fseapdyrng vecpvsvnke
       61 vvsscdpdlv hvamtldsey lrgsiaavhs vlrhascpen vffhfiaaef dpasprvlsk
      121 lvrstfpsln fkiyifreda vinlisssir qalenplnya rnylgdildl cvdrviylds
      181 dlvvvddihk lwntaltnsr vigapeycha nftkyftdgf wsdpvlsrvf hsrrpcyfnt
      241 gvmvmdlvrw regnyrkrie nwmeiqrkrr iyelgslppf llvfagnvea idhkwnqhgl
      301 ggdnvrgscr slhtgpvsll hwsgkgkpwv rldarnpcpl dhlwkpydly kgssikdrss
      361 fpssiflgfs sfls
//
LOCUS       XP_016692694             219 aa            linear   PLN 06-AUG-2024
DEFINITION  germin-like protein subfamily 1 member 1 [Gossypium hirsutum].
ACCESSION   XP_016692694
VERSION     XP_016692694.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837205.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..219
                     /product="germin-like protein subfamily 1 member 1"
                     /calculated_mol_wt=23317
     Region          24..217
                     /region_name="cupin_OxOx"
                     /note="Oxalate oxidase (germin), cupin domain; cd02241"
                     /db_xref="CDD:380368"
     Site            order(26,30..31,57..61,63..64,81,86,93..96,116,118,120,
                     122,128,130,132,138,140,142,145..149,151,154,170,172,174)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380368"
     Site            order(78,97,99,107,110,112,117,156,169,173,180)
                     /site_type="active"
                     /db_xref="CDD:380368"
     CDS             1..219
                     /gene="LOC107909610"
                     /coded_by="XM_016837205.2:318..977"
                     /db_xref="GeneID:107909610"
ORIGIN      
        1 mkmcrlflql flglillpgl akpdpdplqd yciadtkspl ylngapclnp tlalsshftt
       61 salakpgdtk anqfgfsvtl ttlvnlpgin tmgltmarvd iaanglvpph shprasevti
      121 clqgvilvgf vdtsnrlftq klepgdsfvf prglihflyn mepkkpalai sglssqnpga
      181 qiasraafvs nppipevvle kafqispqdv akirknlgg
//
LOCUS       XP_016692691             394 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692691
VERSION     XP_016692691.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837202.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692691.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..394
                     /product="pyruvate dehydrogenase E1 component subunit
                     alpha-1, mitochondrial isoform X1"
                     /calculated_mol_wt=43278
     Region          33..394
                     /region_name="PLN02269"
                     /note="Pyruvate dehydrogenase E1 component subunit alpha"
                     /db_xref="CDD:215152"
     Site            order(91,143,170..171,202,204..207,210,214,218,233..236,
                     250,253,300,304)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238958"
     Site            order(121..122,170,172,200..203,230,232,296)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238958"
     Site            order(165,167,169,174,177..178,181..182,184..185,188,
                     207..208,214..215,218)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:238958"
     Site            order(291..297,299..309,318..320)
                     /site_type="phosphorylation"
                     /note="phosphorylation loop region [posttranslational
                     modification]"
                     /db_xref="CDD:238958"
     CDS             1..394
                     /gene="LOC107909608"
                     /coded_by="XM_016837202.2:242..1426"
                     /db_xref="GeneID:107909608"
ORIGIN      
        1 malsrlasss srsadllkpl csaislrrpi stdttpitve tsvpftshqc dtpsrsvqtn
       61 akelftffrd malmrrmeia adslykakli rgfchlydgq eavavgmeaa itkkdciita
      121 yrdhctfvar ggtllevfae lmgrqagcsr gkggsmhfyk kdsnfygghg ivgaqvplgc
      181 glafaqkysk deavtfalyg dgaanqgqlf ealnisalwd lpailvcenn hygmgtaewr
      241 aakspayykr gdyapglkvd gmdafavkqa ctfakehalk ngpiilemdt yryhghsmsd
      301 pgstyrtrde itgvrqerdp verirklils hdlatekelk diekeirkev ddaiaqaken
      361 plpesselft nvyakglgve sfgadrkevr ailp
//
LOCUS       XP_016692692             333 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692692
VERSION     XP_016692692.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837203.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692692.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..333
                     /product="pyruvate dehydrogenase E1 component subunit
                     alpha, mitochondrial isoform X2"
                     /calculated_mol_wt=36269
     Region          33..>286
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cl01629"
                     /db_xref="CDD:470272"
     Site            order(91,143,170..171,202,204..207,210,214,218,233..236,
                     250,253)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238958"
     Site            order(121..122,170,172,200..203,230,232)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238958"
     Site            order(165,167,169,174,177..178,181..182,184..185,188,
                     207..208,214..215,218)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:238958"
     CDS             1..333
                     /gene="LOC107909608"
                     /coded_by="XM_016837203.2:239..1240"
                     /db_xref="GeneID:107909608"
ORIGIN      
        1 malsrlasss srsadllkpl csaislrrpi stdttpitve tsvpftshqc dtpsrsvqtn
       61 akelftffrd malmrrmeia adslykakli rgfchlydgq eavavgmeaa itkkdciita
      121 yrdhctfvar ggtllevfae lmgrqagcsr gkggsmhfyk kdsnfygghg ivgaqvplgc
      181 glafaqkysk deavtfalyg dgaanqgqlf ealnisalwd lpailvcenn hygmgtaewr
      241 aakspayykr gdyapglkvd gmdafavkqa ctfakehalk ngpifvvpic rflkwtligi
      301 mvipclilea piepvmrllv ldrsvirlke lgs
//
LOCUS       XP_016692685            1445 aa            linear   PLN 06-AUG-2024
DEFINITION  paired amphipathic helix protein Sin3-like 4 [Gossypium hirsutum].
ACCESSION   XP_016692685
VERSION     XP_016692685.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837196.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692685.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1445
                     /product="paired amphipathic helix protein Sin3-like 4"
                     /calculated_mol_wt=163915
     Region          42..>728
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     Region          1152..1399
                     /region_name="Sin3a_C"
                     /note="C-terminal domain of Sin3a protein; pfam16879"
                     /db_xref="CDD:465294"
     CDS             1..1445
                     /gene="LOC107909606"
                     /coded_by="XM_016837196.2:553..4890"
                     /db_xref="GeneID:107909606"
ORIGIN      
        1 mkrsrdevyi ggsqlkrpvv ssrgegsgqq qmaggtgatq klttndalay lkavkdifqe
       61 krekyddfle vmkdfkaqri dtagviarvk elfkgyrdli lgfntflpkg yeitlplede
      121 qppqkkpvef eeainfvnki ktrfqgddhv yksfldilnm yrkenksite vyqevaalfr
      181 dhpdllleft hflpdtsata snhyastgrn siprerssam pgmcavpadk kdrstallgd
      241 cdlsmeradp dhdrvmtkae keqrrrgeke rdktedrdrr dreqddrdfe idgnrdfnmr
      301 fphkrngkpa rrseesgveq lqqvggdgsa yddknamksv ynqefafcdk vkeklrnpdh
      361 yqeflrclhl ysnevisrte lqslvndllg rypdvmdgfn kflmqcekne glladfvsek
      421 ylrnegqlpr svkmedrdrd rerdngvkir dretrerdrh drssfankda ghkvslfssk
      481 dnkyfgkpin eldlsncerc tpsyrllpkn ypipsasqrt elgsevlndh wvsvtsgsed
      541 ysfkhmrknq yeeslfrced drfeldmlle svnattkrve ellekinnni ikldspirie
      601 ehftalnlrc ierlygdhgl dvmdvlrkna hlalpviltr lkqkqeewar crsdfnkvwa
      661 eiyaknyhks ldhrsfyfkq qdsknlstka llaeikeise kkrkeddvll aiaagnrrpi
      721 ipnlkfeyld peihedlyql ikyscgemct teqldkviki wttfmepmlg vpcrpqgaed
      781 tedvvkaknn svkngsasvg esegspggag vamnskhsnp srhedesipp eqssscrswl
      841 lngdngvkqd gsayidsvgh knasscdapq rdrmqvspan gdeiagvskq astserlvas
      901 nasliarveq sngrtsient sgliatpsrp gnaaveggle lksnnenlps segggcsrpi
      961 isgngmmteg sknhrynees vaqlkveree gelspngdfe ednfadygea sletalkvke
     1021 gaanrqyqrh geeevcrgea ggendadadd egdesaqrts edsenaseng evfgsdsgeg
     1081 esreeqeedi dhdehdnkve segeaegmad ahdaeadvtl lpfserfllt vkplakyvps
     1141 plhenkkdsq vfygndsfyv lfrlhhtlye riqsakinss sadrkwrass dpsptdlysr
     1201 fmsalynlld gssdntkfed dcraiigtqs yvlftldkli ykivkqlqai asdemdnkll
     1261 qlyayeksrr srrfdvvyhe narvllhden iyriecsstp tclsiqlmdy ghdkpevtav
     1321 smdpnfaayl hndflsvvpk ekekpgiflk rnvrkcaggd elsstcrtte glkvvnglec
     1381 kiacnsskvs yvldtedflf rvkrksalnq nsqcqnrarv sngnsirlrr qqryqrllla
     1441 ytsma
//
LOCUS       XP_016692686            1445 aa            linear   PLN 06-AUG-2024
DEFINITION  paired amphipathic helix protein Sin3-like 4 [Gossypium hirsutum].
ACCESSION   XP_016692686
VERSION     XP_016692686.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837197.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692686.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1445
                     /product="paired amphipathic helix protein Sin3-like 4"
                     /calculated_mol_wt=163915
     Region          42..>728
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     Region          1152..1399
                     /region_name="Sin3a_C"
                     /note="C-terminal domain of Sin3a protein; pfam16879"
                     /db_xref="CDD:465294"
     CDS             1..1445
                     /gene="LOC107909606"
                     /coded_by="XM_016837197.2:553..4890"
                     /db_xref="GeneID:107909606"
ORIGIN      
        1 mkrsrdevyi ggsqlkrpvv ssrgegsgqq qmaggtgatq klttndalay lkavkdifqe
       61 krekyddfle vmkdfkaqri dtagviarvk elfkgyrdli lgfntflpkg yeitlplede
      121 qppqkkpvef eeainfvnki ktrfqgddhv yksfldilnm yrkenksite vyqevaalfr
      181 dhpdllleft hflpdtsata snhyastgrn siprerssam pgmcavpadk kdrstallgd
      241 cdlsmeradp dhdrvmtkae keqrrrgeke rdktedrdrr dreqddrdfe idgnrdfnmr
      301 fphkrngkpa rrseesgveq lqqvggdgsa yddknamksv ynqefafcdk vkeklrnpdh
      361 yqeflrclhl ysnevisrte lqslvndllg rypdvmdgfn kflmqcekne glladfvsek
      421 ylrnegqlpr svkmedrdrd rerdngvkir dretrerdrh drssfankda ghkvslfssk
      481 dnkyfgkpin eldlsncerc tpsyrllpkn ypipsasqrt elgsevlndh wvsvtsgsed
      541 ysfkhmrknq yeeslfrced drfeldmlle svnattkrve ellekinnni ikldspirie
      601 ehftalnlrc ierlygdhgl dvmdvlrkna hlalpviltr lkqkqeewar crsdfnkvwa
      661 eiyaknyhks ldhrsfyfkq qdsknlstka llaeikeise kkrkeddvll aiaagnrrpi
      721 ipnlkfeyld peihedlyql ikyscgemct teqldkviki wttfmepmlg vpcrpqgaed
      781 tedvvkaknn svkngsasvg esegspggag vamnskhsnp srhedesipp eqssscrswl
      841 lngdngvkqd gsayidsvgh knasscdapq rdrmqvspan gdeiagvskq astserlvas
      901 nasliarveq sngrtsient sgliatpsrp gnaaveggle lksnnenlps segggcsrpi
      961 isgngmmteg sknhrynees vaqlkveree gelspngdfe ednfadygea sletalkvke
     1021 gaanrqyqrh geeevcrgea ggendadadd egdesaqrts edsenaseng evfgsdsgeg
     1081 esreeqeedi dhdehdnkve segeaegmad ahdaeadvtl lpfserfllt vkplakyvps
     1141 plhenkkdsq vfygndsfyv lfrlhhtlye riqsakinss sadrkwrass dpsptdlysr
     1201 fmsalynlld gssdntkfed dcraiigtqs yvlftldkli ykivkqlqai asdemdnkll
     1261 qlyayeksrr srrfdvvyhe narvllhden iyriecsstp tclsiqlmdy ghdkpevtav
     1321 smdpnfaayl hndflsvvpk ekekpgiflk rnvrkcaggd elsstcrtte glkvvnglec
     1381 kiacnsskvs yvldtedflf rvkrksalnq nsqcqnrarv sngnsirlrr qqryqrllla
     1441 ytsma
//
LOCUS       XP_016692688            1445 aa            linear   PLN 06-AUG-2024
DEFINITION  paired amphipathic helix protein Sin3-like 4 [Gossypium hirsutum].
ACCESSION   XP_016692688
VERSION     XP_016692688.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837199.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692688.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1445
                     /product="paired amphipathic helix protein Sin3-like 4"
                     /calculated_mol_wt=163915
     Region          42..>728
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     Region          1152..1399
                     /region_name="Sin3a_C"
                     /note="C-terminal domain of Sin3a protein; pfam16879"
                     /db_xref="CDD:465294"
     CDS             1..1445
                     /gene="LOC107909606"
                     /coded_by="XM_016837199.2:553..4890"
                     /db_xref="GeneID:107909606"
ORIGIN      
        1 mkrsrdevyi ggsqlkrpvv ssrgegsgqq qmaggtgatq klttndalay lkavkdifqe
       61 krekyddfle vmkdfkaqri dtagviarvk elfkgyrdli lgfntflpkg yeitlplede
      121 qppqkkpvef eeainfvnki ktrfqgddhv yksfldilnm yrkenksite vyqevaalfr
      181 dhpdllleft hflpdtsata snhyastgrn siprerssam pgmcavpadk kdrstallgd
      241 cdlsmeradp dhdrvmtkae keqrrrgeke rdktedrdrr dreqddrdfe idgnrdfnmr
      301 fphkrngkpa rrseesgveq lqqvggdgsa yddknamksv ynqefafcdk vkeklrnpdh
      361 yqeflrclhl ysnevisrte lqslvndllg rypdvmdgfn kflmqcekne glladfvsek
      421 ylrnegqlpr svkmedrdrd rerdngvkir dretrerdrh drssfankda ghkvslfssk
      481 dnkyfgkpin eldlsncerc tpsyrllpkn ypipsasqrt elgsevlndh wvsvtsgsed
      541 ysfkhmrknq yeeslfrced drfeldmlle svnattkrve ellekinnni ikldspirie
      601 ehftalnlrc ierlygdhgl dvmdvlrkna hlalpviltr lkqkqeewar crsdfnkvwa
      661 eiyaknyhks ldhrsfyfkq qdsknlstka llaeikeise kkrkeddvll aiaagnrrpi
      721 ipnlkfeyld peihedlyql ikyscgemct teqldkviki wttfmepmlg vpcrpqgaed
      781 tedvvkaknn svkngsasvg esegspggag vamnskhsnp srhedesipp eqssscrswl
      841 lngdngvkqd gsayidsvgh knasscdapq rdrmqvspan gdeiagvskq astserlvas
      901 nasliarveq sngrtsient sgliatpsrp gnaaveggle lksnnenlps segggcsrpi
      961 isgngmmteg sknhrynees vaqlkveree gelspngdfe ednfadygea sletalkvke
     1021 gaanrqyqrh geeevcrgea ggendadadd egdesaqrts edsenaseng evfgsdsgeg
     1081 esreeqeedi dhdehdnkve segeaegmad ahdaeadvtl lpfserfllt vkplakyvps
     1141 plhenkkdsq vfygndsfyv lfrlhhtlye riqsakinss sadrkwrass dpsptdlysr
     1201 fmsalynlld gssdntkfed dcraiigtqs yvlftldkli ykivkqlqai asdemdnkll
     1261 qlyayeksrr srrfdvvyhe narvllhden iyriecsstp tclsiqlmdy ghdkpevtav
     1321 smdpnfaayl hndflsvvpk ekekpgiflk rnvrkcaggd elsstcrtte glkvvnglec
     1381 kiacnsskvs yvldtedflf rvkrksalnq nsqcqnrarv sngnsirlrr qqryqrllla
     1441 ytsma
//
LOCUS       XP_016692687            1445 aa            linear   PLN 06-AUG-2024
DEFINITION  paired amphipathic helix protein Sin3-like 4 [Gossypium hirsutum].
ACCESSION   XP_016692687
VERSION     XP_016692687.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837198.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692687.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1445
                     /product="paired amphipathic helix protein Sin3-like 4"
                     /calculated_mol_wt=163915
     Region          42..>728
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     Region          1152..1399
                     /region_name="Sin3a_C"
                     /note="C-terminal domain of Sin3a protein; pfam16879"
                     /db_xref="CDD:465294"
     CDS             1..1445
                     /gene="LOC107909606"
                     /coded_by="XM_016837198.2:553..4890"
                     /db_xref="GeneID:107909606"
ORIGIN      
        1 mkrsrdevyi ggsqlkrpvv ssrgegsgqq qmaggtgatq klttndalay lkavkdifqe
       61 krekyddfle vmkdfkaqri dtagviarvk elfkgyrdli lgfntflpkg yeitlplede
      121 qppqkkpvef eeainfvnki ktrfqgddhv yksfldilnm yrkenksite vyqevaalfr
      181 dhpdllleft hflpdtsata snhyastgrn siprerssam pgmcavpadk kdrstallgd
      241 cdlsmeradp dhdrvmtkae keqrrrgeke rdktedrdrr dreqddrdfe idgnrdfnmr
      301 fphkrngkpa rrseesgveq lqqvggdgsa yddknamksv ynqefafcdk vkeklrnpdh
      361 yqeflrclhl ysnevisrte lqslvndllg rypdvmdgfn kflmqcekne glladfvsek
      421 ylrnegqlpr svkmedrdrd rerdngvkir dretrerdrh drssfankda ghkvslfssk
      481 dnkyfgkpin eldlsncerc tpsyrllpkn ypipsasqrt elgsevlndh wvsvtsgsed
      541 ysfkhmrknq yeeslfrced drfeldmlle svnattkrve ellekinnni ikldspirie
      601 ehftalnlrc ierlygdhgl dvmdvlrkna hlalpviltr lkqkqeewar crsdfnkvwa
      661 eiyaknyhks ldhrsfyfkq qdsknlstka llaeikeise kkrkeddvll aiaagnrrpi
      721 ipnlkfeyld peihedlyql ikyscgemct teqldkviki wttfmepmlg vpcrpqgaed
      781 tedvvkaknn svkngsasvg esegspggag vamnskhsnp srhedesipp eqssscrswl
      841 lngdngvkqd gsayidsvgh knasscdapq rdrmqvspan gdeiagvskq astserlvas
      901 nasliarveq sngrtsient sgliatpsrp gnaaveggle lksnnenlps segggcsrpi
      961 isgngmmteg sknhrynees vaqlkveree gelspngdfe ednfadygea sletalkvke
     1021 gaanrqyqrh geeevcrgea ggendadadd egdesaqrts edsenaseng evfgsdsgeg
     1081 esreeqeedi dhdehdnkve segeaegmad ahdaeadvtl lpfserfllt vkplakyvps
     1141 plhenkkdsq vfygndsfyv lfrlhhtlye riqsakinss sadrkwrass dpsptdlysr
     1201 fmsalynlld gssdntkfed dcraiigtqs yvlftldkli ykivkqlqai asdemdnkll
     1261 qlyayeksrr srrfdvvyhe narvllhden iyriecsstp tclsiqlmdy ghdkpevtav
     1321 smdpnfaayl hndflsvvpk ekekpgiflk rnvrkcaggd elsstcrtte glkvvnglec
     1381 kiacnsskvs yvldtedflf rvkrksalnq nsqcqnrarv sngnsirlrr qqryqrllla
     1441 ytsma
//
LOCUS       XP_016692689            1445 aa            linear   PLN 06-AUG-2024
DEFINITION  paired amphipathic helix protein Sin3-like 4 [Gossypium hirsutum].
ACCESSION   XP_016692689
VERSION     XP_016692689.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837200.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692689.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1445
                     /product="paired amphipathic helix protein Sin3-like 4"
                     /calculated_mol_wt=163915
     Region          42..>728
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     Region          1152..1399
                     /region_name="Sin3a_C"
                     /note="C-terminal domain of Sin3a protein; pfam16879"
                     /db_xref="CDD:465294"
     CDS             1..1445
                     /gene="LOC107909606"
                     /coded_by="XM_016837200.2:553..4890"
                     /db_xref="GeneID:107909606"
ORIGIN      
        1 mkrsrdevyi ggsqlkrpvv ssrgegsgqq qmaggtgatq klttndalay lkavkdifqe
       61 krekyddfle vmkdfkaqri dtagviarvk elfkgyrdli lgfntflpkg yeitlplede
      121 qppqkkpvef eeainfvnki ktrfqgddhv yksfldilnm yrkenksite vyqevaalfr
      181 dhpdllleft hflpdtsata snhyastgrn siprerssam pgmcavpadk kdrstallgd
      241 cdlsmeradp dhdrvmtkae keqrrrgeke rdktedrdrr dreqddrdfe idgnrdfnmr
      301 fphkrngkpa rrseesgveq lqqvggdgsa yddknamksv ynqefafcdk vkeklrnpdh
      361 yqeflrclhl ysnevisrte lqslvndllg rypdvmdgfn kflmqcekne glladfvsek
      421 ylrnegqlpr svkmedrdrd rerdngvkir dretrerdrh drssfankda ghkvslfssk
      481 dnkyfgkpin eldlsncerc tpsyrllpkn ypipsasqrt elgsevlndh wvsvtsgsed
      541 ysfkhmrknq yeeslfrced drfeldmlle svnattkrve ellekinnni ikldspirie
      601 ehftalnlrc ierlygdhgl dvmdvlrkna hlalpviltr lkqkqeewar crsdfnkvwa
      661 eiyaknyhks ldhrsfyfkq qdsknlstka llaeikeise kkrkeddvll aiaagnrrpi
      721 ipnlkfeyld peihedlyql ikyscgemct teqldkviki wttfmepmlg vpcrpqgaed
      781 tedvvkaknn svkngsasvg esegspggag vamnskhsnp srhedesipp eqssscrswl
      841 lngdngvkqd gsayidsvgh knasscdapq rdrmqvspan gdeiagvskq astserlvas
      901 nasliarveq sngrtsient sgliatpsrp gnaaveggle lksnnenlps segggcsrpi
      961 isgngmmteg sknhrynees vaqlkveree gelspngdfe ednfadygea sletalkvke
     1021 gaanrqyqrh geeevcrgea ggendadadd egdesaqrts edsenaseng evfgsdsgeg
     1081 esreeqeedi dhdehdnkve segeaegmad ahdaeadvtl lpfserfllt vkplakyvps
     1141 plhenkkdsq vfygndsfyv lfrlhhtlye riqsakinss sadrkwrass dpsptdlysr
     1201 fmsalynlld gssdntkfed dcraiigtqs yvlftldkli ykivkqlqai asdemdnkll
     1261 qlyayeksrr srrfdvvyhe narvllhden iyriecsstp tclsiqlmdy ghdkpevtav
     1321 smdpnfaayl hndflsvvpk ekekpgiflk rnvrkcaggd elsstcrtte glkvvnglec
     1381 kiacnsskvs yvldtedflf rvkrksalnq nsqcqnrarv sngnsirlrr qqryqrllla
     1441 ytsma
//
LOCUS       XP_016692690            1445 aa            linear   PLN 06-AUG-2024
DEFINITION  paired amphipathic helix protein Sin3-like 4 [Gossypium hirsutum].
ACCESSION   XP_016692690
VERSION     XP_016692690.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837201.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692690.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1445
                     /product="paired amphipathic helix protein Sin3-like 4"
                     /calculated_mol_wt=163915
     Region          42..>728
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     Region          1152..1399
                     /region_name="Sin3a_C"
                     /note="C-terminal domain of Sin3a protein; pfam16879"
                     /db_xref="CDD:465294"
     CDS             1..1445
                     /gene="LOC107909606"
                     /coded_by="XM_016837201.2:553..4890"
                     /db_xref="GeneID:107909606"
ORIGIN      
        1 mkrsrdevyi ggsqlkrpvv ssrgegsgqq qmaggtgatq klttndalay lkavkdifqe
       61 krekyddfle vmkdfkaqri dtagviarvk elfkgyrdli lgfntflpkg yeitlplede
      121 qppqkkpvef eeainfvnki ktrfqgddhv yksfldilnm yrkenksite vyqevaalfr
      181 dhpdllleft hflpdtsata snhyastgrn siprerssam pgmcavpadk kdrstallgd
      241 cdlsmeradp dhdrvmtkae keqrrrgeke rdktedrdrr dreqddrdfe idgnrdfnmr
      301 fphkrngkpa rrseesgveq lqqvggdgsa yddknamksv ynqefafcdk vkeklrnpdh
      361 yqeflrclhl ysnevisrte lqslvndllg rypdvmdgfn kflmqcekne glladfvsek
      421 ylrnegqlpr svkmedrdrd rerdngvkir dretrerdrh drssfankda ghkvslfssk
      481 dnkyfgkpin eldlsncerc tpsyrllpkn ypipsasqrt elgsevlndh wvsvtsgsed
      541 ysfkhmrknq yeeslfrced drfeldmlle svnattkrve ellekinnni ikldspirie
      601 ehftalnlrc ierlygdhgl dvmdvlrkna hlalpviltr lkqkqeewar crsdfnkvwa
      661 eiyaknyhks ldhrsfyfkq qdsknlstka llaeikeise kkrkeddvll aiaagnrrpi
      721 ipnlkfeyld peihedlyql ikyscgemct teqldkviki wttfmepmlg vpcrpqgaed
      781 tedvvkaknn svkngsasvg esegspggag vamnskhsnp srhedesipp eqssscrswl
      841 lngdngvkqd gsayidsvgh knasscdapq rdrmqvspan gdeiagvskq astserlvas
      901 nasliarveq sngrtsient sgliatpsrp gnaaveggle lksnnenlps segggcsrpi
      961 isgngmmteg sknhrynees vaqlkveree gelspngdfe ednfadygea sletalkvke
     1021 gaanrqyqrh geeevcrgea ggendadadd egdesaqrts edsenaseng evfgsdsgeg
     1081 esreeqeedi dhdehdnkve segeaegmad ahdaeadvtl lpfserfllt vkplakyvps
     1141 plhenkkdsq vfygndsfyv lfrlhhtlye riqsakinss sadrkwrass dpsptdlysr
     1201 fmsalynlld gssdntkfed dcraiigtqs yvlftldkli ykivkqlqai asdemdnkll
     1261 qlyayeksrr srrfdvvyhe narvllhden iyriecsstp tclsiqlmdy ghdkpevtav
     1321 smdpnfaayl hndflsvvpk ekekpgiflk rnvrkcaggd elsstcrtte glkvvnglec
     1381 kiacnsskvs yvldtedflf rvkrksalnq nsqcqnrarv sngnsirlrr qqryqrllla
     1441 ytsma
//
LOCUS       XP_016692684             646 aa            linear   PLN 06-AUG-2024
DEFINITION  TORTIFOLIA1-like protein 4 [Gossypium hirsutum].
ACCESSION   XP_016692684
VERSION     XP_016692684.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837195.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692684.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..646
                     /product="TORTIFOLIA1-like protein 4"
                     /calculated_mol_wt=69906
     Region          71..120
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     Site            order(74..75,78,81..82,115..116,122,125..126,129,154..155,
                     158,161..162,165,195..196,199,202..203,236..237,240,
                     243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          98..129
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          99..246
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          139..166
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..203
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          216..245
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..646
                     /gene="LOC107909605"
                     /coded_by="XM_016837195.2:215..2155"
                     /db_xref="GeneID:107909605"
ORIGIN      
        1 mssknrspqs pqqqlhdlkq rvftclnkla drdtlalasa elesiarnlt vdsispflnc
       61 lhntdssaks pvrrqcvill tlmsqshgnv lsphlskmis tlarrlrdhd savrsacvea
      121 ttamsshitk ppfsvlskpl iemlvveqdv nsqigaamcl saaieaapdp eteqlkkvlp
      181 klgklvrses fkakaavfgv igsvasvgga gskgvldwfv pcaveslgse dwgtrkaaae
      241 algkvamaek elaaeykaac vttlgnkrfd kvkivretmn rsldlwkdvp gvceevstts
      301 qsdsssidng svgcftsvtk smndvgfrtp qskkvvptsr sppsdasaas tvkketples
      361 nnsnsntrrl drskssdwki eavqpkslfs easgdynikr svsfgkahde kvqkfgglrs
      421 qsqvlpfhde enldvtdkna alyvdenpkd iedlclireq laqiedqqsn llnllqkfig
      481 ssqsginsle trvnglemal deisydlais sgrilnmdst dnkccklpga eflspkfwrk
      541 tesrfstsrl pssgrmlsln avhnlhdkds ggemykpays rgyqrqggsg famnpvgdag
      601 sdirdnpgfs kntiqnaerf qvgnssasdg tslvsctapt nlssrf
//
LOCUS       XP_040944898             611 aa            linear   PLN 06-AUG-2024
DEFINITION  probable inactive receptor kinase At1g27190 [Gossypium hirsutum].
ACCESSION   XP_040944898
VERSION     XP_040944898.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088964.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..611
                     /product="probable inactive receptor kinase At1g27190"
                     /calculated_mol_wt=67031
     Region          26..>190
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          77..97
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          98..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..586
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(310..312,316,328,330,358,374..377,381,383,433,435,
                     437..438,440,451,454,474..477)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(310..312,316,328,330,358,374..377,381,433,435,
                     437..438,440,451)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(312,381,383,433,435,437,454,474..477)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(450..457,471..473,474..477)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..611
                     /gene="LOC107909604"
                     /coded_by="XM_041088964.1:333..2168"
                     /db_xref="GeneID:107909604"
ORIGIN      
        1 mkknililat sslllfnfll sfaieddiac leglknsltg adsplstwsf snrsstsvcq
       61 ltgvscwnek enriislhlp smklsgqlpd slkycrslqi ldlsnnslsg pipsdicswl
      121 pylvhldlsg nlfsgsiplq ivdckflndl vlsdnklsgs ipyelarldr lkrfsvagnd
      181 lsgsipsdla rfgedgfdgn hglcgkplsk cgglnaknlg iiiiagvtga avplivgfai
      241 wwwfflraga gekrkksydv evqdgsswie llkshrlaqv slfqkpinki kladlmvatn
      301 nfdaenavis trtgvsymav lpdgsalaik rlstcklsek qfrsemnrlg qlrhpnlvpl
      361 lgycvveeer llvykhmpng tlysqlhggn ligfgngkfe vldwstrlki gvgvarglaw
      421 lhhgcqppyv hqyfssnvvl ldddfdaria dfglarlmgs rdsndssfmn gdlgefgyva
      481 peysstmvas lkgdvfsfgv vllelvtgqk pigvsnaeeg fkgnlvdwvn qlfstgrskd
      541 avdkallgkg cddeimqflr vactcvvprp kdrpsmyqvy eslkimgekh galeqydefp
      601 lifgkqqehd n
//
LOCUS       XP_040944899            1375 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RPV1 [Gossypium hirsutum].
ACCESSION   XP_040944899
VERSION     XP_040944899.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088965.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1375
                     /product="disease resistance protein RPV1"
                     /calculated_mol_wt=154405
     Region          8..>864
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          598..619
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          620..644
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          645..667
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          668..691
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          691..>1127
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          692..715
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          716..739
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          740..762
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          763..786
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          787..809
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          810..833
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          834..856
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          857..879
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          880..895
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          927..949
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          950..973
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          974..996
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          997..1028
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1029..1052
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1053..1096
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1097..1119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1120..1142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1375
                     /gene="LOC107944104"
                     /coded_by="XM_041088965.1:200..4327"
                     /db_xref="GeneID:107944104"
ORIGIN      
        1 mesagvvstt tptsfrlrwd vflsfrgedt rhgitntlyc slvgeglrvf rdddalrrgd
       61 eiapslveai edsasfvvil senyatsrwc lqelaricel hswsrrlvlp vfygvdpsdv
      121 rkqggpfkea ffshenrfge qeakkwream akvgslagfv kklvgrdere lirvllrevl
      181 qhvkntplev atcavgldtr vtelinllgv kssgikvvgl hgiggigktt lakavfnkil
      241 vhfdhhsfis nvrelskrgd glvslqkkli gdlgptgnfh lpadevdana srirkiinen
      301 fnekrvlivl ddvdqenqln alglgarvkw indvsiriii ttrnkgvlne cyvnwtyevr
      361 elhfdqalel fsyhalrrek ptkefeqlsk qlvaltgnlp lalevfgsfl ldkrkvtewe
      421 dalnklrdvr phklqdvlki sfdaldrenq rifldvaccf ldlhtkredi tdvlrgcgfn
      481 aeiglrvlee kslikftegd glwmhdqlrd mgkeivqnen ddpgmrsrlw drnqimtvlq
      541 nhkgtrsieg ivmdmkkven gnqvvvhtep fksmvnlrll qvnhvklegk fkfvphelkw
      601 lqwqgcalkt lpsdfcpqkl avldlseski eklwssysnn vaenlmvinl rgcphlaslp
      661 dlsghknlrk ivlaycvkli nidksvgtli slrhldmtgc lnlvefpsda sgmknlqtlv
      721 ltdcsnlkel pedigsmrsl kelyvnrtgi eklpesiyrl ekleklslnr cihikqlprc
      781 vgklaslkel hldgsglqel pdsvgslesl eklslisces ltaipdtvgn lnllkelfik
      841 gkaitelpns igslsylkcl nvggiqmrkl pdsirglvss veleiegtsi tclpsqigdl
      901 rllerleiln ctsleslpds tggllaltfi kisnasitel pesfgklenl ielrlnkcrk
      961 lhklpssmgn lkslhhlyme etavtelpes fgmltclmvl nmrkdpnkqe qpnssfvtlp
     1021 asftnllslq eldarawric geiaddfekl atieildlgs ndfyklpssl rglsllrdlk
     1081 lpkceklqsl pplpsslekl dlancislat lsdlsnvkgl qelnltncek lvdlpglesl
     1141 tslrelymsn cstcasaakk rlskvylknl rnlsmpgsri pdwftqdmvt fsshktrdlt
     1201 gviiavvvsi nhhnpdelry qlpvvpdvea qifngeeaim ttalnligvp rtnldnvhlc
     1261 ryplvsmlkd gfkikvtrrn ppyvpgielk kagiflvyen dddyggdeds ldenqqsvse
     1321 klakffssle endgidhqsn csheieeelq lpskkqkrrp iksccswcgr lsvks
//
LOCUS       XP_040944901            1331 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RPV1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944901
VERSION     XP_040944901.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088967.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1331
                     /product="disease resistance protein RPV1 isoform X1"
                     /calculated_mol_wt=149457
     Region          8..>911
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          595..616
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          617..641
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          642..664
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          665..681
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          689..712
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          713..736
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          733..1143
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          737..759
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          760..783
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          784..806
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          807..830
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          831..853
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          854..876
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          877..899
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          900..923
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          947..970
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          971..993
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          994..1025
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1026..1049
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1050..1072
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1076..>1221
                     /region_name="PRK15386"
                     /note="type III secretion effector GogB"
                     /db_xref="CDD:237954"
     Region          1094..1116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1117..1139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1331
                     /gene="LOC121214760"
                     /coded_by="XM_041088967.1:104..4099"
                     /db_xref="GeneID:121214760"
ORIGIN      
        1 mesagvvstt tptsfrlrwd vflsfrgedt rhgitntlyc slvgeglrvf rdddalrrgd
       61 eiapslveai edsaafvvil senyasshwc leelariwel hsrsrrlvlp vfygvdpsdv
      121 rkqggpfkea ffshenrfge qeakkwream akvgslagfv knderelirv llrevlqhvn
      181 ntpvevatya vgldtrvtel inlldvkssg ikvvglhgig gigkttlaka vfnkilvhfd
      241 hrsfisnvre lskqgdglvs lqkkligdlf gstgnfhlpa devdanasri rkiinenine
      301 krvlivlddv dqenqlnalg lgarvkwqnd gsiriiittr nkgvlnecyv nrtyevrelh
      361 fdqalelfsy halrrekptk efeqlskqlv altgnlplal evfgsflldk rkvtewedal
      421 nklrdvrphe lqdvlkisfd aldrenqrif ldvaccfldl htkrediidv lrgcgfkaqi
      481 glrvleeksl ikftegdalw mhdqlrdmgk eivqnenddp gmrsrlwdrn qimtvlqnhk
      541 gtrsiegivl dmkkvengnq vvvhtkpfks mvnlrllqvn hvklegkfkf vphelkwlqw
      601 qgcalktlps dfcpqklavl dlseskiekl wssysnnvae nlmvinlrgc phlaslpdls
      661 ghknlqkivl aycvklinid ksvgtlislh hldmtgclnl vefpsdvsgm knlqtlvltd
      721 csnlkelped igsmrslkel yvnrtciekl pesiyrlekl eklslnhcih ikqlprcvgk
      781 laslkelhld gsglqelpds vgslenlekl slisceslta ipdtvgnlns lkelfikgka
      841 itelpnsigs lsylkclyvg giqmrklpds irglvssvel diegtsitcl psqigdlrll
      901 kklvifncts leslpdstgg lfaltfinif kasitelpes fgmlenlitl rlnecrklhk
      961 lpssmgnlks lhhlymketa vtelpesfgm ltglmvlnmr kdpnkqeqpn ssfvalpasf
     1021 tnllslqeld arawricgei pddfeklaai eildlgsndf yklpsslrgl sllrdlklpk
     1081 cenlqslppl pssleklnla ncislatlsd lsnikglqel nltnceklvd lpglesltsl
     1141 relymsncst casaakkrls kvylkklrnl smpgsripdw ftqdmvtfss hktrdltgvi
     1201 iavvvsinhh ipdelryqlp avpdiqaqif ngeqaimtta lnligvprtn qdnvhlcryp
     1261 ayrplvsilk dgfkikvtrr nppyvqgvel kkagiflvye ndddyggded sldenqqsvs
     1321 eklakffssl e
//
LOCUS       XP_040944902            1232 aa            linear   PLN 06-AUG-2024
DEFINITION  disease resistance protein RPV1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944902
VERSION     XP_040944902.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088968.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1232
                     /product="disease resistance protein RPV1 isoform X2"
                     /calculated_mol_wt=138018
     Region          47..>812
                     /region_name="PLN03210"
                     /note="Resistant to P. syringae 6; Provisional"
                     /db_xref="CDD:215633"
     Region          496..517
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          518..542
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          543..565
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          566..582
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          590..613
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          614..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          634..1044
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          638..660
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          661..684
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          685..707
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          708..731
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          732..754
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          755..777
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          778..800
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          801..824
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          848..871
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          872..894
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          895..926
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          927..950
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          951..973
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          977..>1122
                     /region_name="PRK15386"
                     /note="type III secretion effector GogB"
                     /db_xref="CDD:237954"
     Region          995..1017
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1018..1040
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1232
                     /gene="LOC121214760"
                     /coded_by="XM_041088968.1:352..4050"
                     /db_xref="GeneID:121214760"
ORIGIN      
        1 mgltplmfen rgdllrkpsl atktdsenkr prnggkpwpk lapllvslks ssnfygaftl
       61 vgsderelir vllrevlqhv nntpvevaty avgldtrvte linlldvkss gikvvglhgi
      121 ggigkttlak avfnkilvhf dhrsfisnvr elskqgdglv slqkkligdl fgstgnfhlp
      181 adevdanasr irkiinenin ekrvlivldd vdqenqlnal glgarvkwqn dgsiriiitt
      241 rnkgvlnecy vnrtyevrel hfdqalelfs yhalrrekpt kefeqlskql valtgnlpla
      301 levfgsflld krkvteweda lnklrdvrph elqdvlkisf daldrenqri fldvaccfld
      361 lhtkrediid vlrgcgfkaq iglrvleeks likftegdal wmhdqlrdmg keivqnendd
      421 pgmrsrlwdr nqimtvlqnh kgtrsiegiv ldmkkvengn qvvvhtkpfk smvnlrllqv
      481 nhvklegkfk fvphelkwlq wqgcalktlp sdfcpqklav ldlseskiek lwssysnnva
      541 enlmvinlrg cphlaslpdl sghknlqkiv laycvklini dksvgtlisl hhldmtgcln
      601 lvefpsdvsg mknlqtlvlt dcsnlkelpe digsmrslke lyvnrtciek lpesiyrlek
      661 leklslnhci hikqlprcvg klaslkelhl dgsglqelpd svgslenlek lslisceslt
      721 aipdtvgnln slkelfikgk aitelpnsig slsylkclyv ggiqmrklpd sirglvssve
      781 ldiegtsitc lpsqigdlrl lkklvifnct sleslpdstg glfaltfini fkasitelpe
      841 sfgmlenlit lrlnecrklh klpssmgnlk slhhlymket avtelpesfg mltglmvlnm
      901 rkdpnkqeqp nssfvalpas ftnllslqel darawricge ipddfeklaa ieildlgsnd
      961 fyklpsslrg lsllrdlklp kcenlqslpp lpssleklnl ancislatls dlsnikglqe
     1021 lnltnceklv dlpgleslts lrelymsncs tcasaakkrl skvylkklrn lsmpgsripd
     1081 wftqdmvtfs shktrdltgv iiavvvsinh hipdelryql pavpdiqaqi fngeqaimtt
     1141 alnligvprt nqdnvhlcry payrplvsil kdgfkikvtr rnppyvqgve lkkagiflvy
     1201 endddyggde dsldenqqsv seklakffss le
//
LOCUS       XP_040944903             200 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944903
VERSION     XP_040944903.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088969.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..200
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22238
     CDS             1..200
                     /gene="LOC121214761"
                     /coded_by="XM_041088969.1:946..1548"
                     /db_xref="GeneID:121214761"
ORIGIN      
        1 msncstcasa akkrlskvyl knlrnlsmpg sripdwftqd mvtfsshktr dltgviiavv
       61 vsinhhipde lryqlpavpd iqaqifngee atmttalnli gvprsnqdng hlcrypayrp
      121 lvsmlkdgfk ikvtrlnppy vqgvelkiag iflvyenddd yggdedslde nqqsvsekla
      181 kffssleend gidhqsncsq
//
LOCUS       XP_016692675             248 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor BHLH089 [Gossypium hirsutum].
ACCESSION   XP_016692675
VERSION     XP_016692675.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837186.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692675.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..248
                     /product="transcription factor BHLH089"
                     /calculated_mol_wt=27344
     Region          119..204
                     /region_name="bHLH_AtBPE_like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Arabidopsis thaliana BIG PETAL (BPE) and similar proteins;
                     cd18919"
                     /db_xref="CDD:381489"
     Site            order(134..135,138..139,141..142,146,164..165)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381489"
     Site            order(144..145,148,151..152,155,165..166,169..170,173,176,
                     179..180,183,186..187,189..190,193,196..197,200,203..204)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381489"
     CDS             1..248
                     /gene="LOC107909594"
                     /coded_by="XM_016837186.2:330..1076"
                     /db_xref="GeneID:107909594"
ORIGIN      
        1 mdppammsdg gynlaeiwqy pvnesglrrg qfgnvppphy ahpnpevsgg vrrrrdgede
       61 aakvvstssg ngvsfgdgkr lkasgcreen ddskveaaep ssgkpveqka kppeppkqdy
      121 ihvrarrgqa tdshslaera rrekisermk ilqdlvpgcn kvigkalvld eiinyiqslq
      181 rqveflsmkl eavnsrmnpt ievfplkdyg qqtfdatgma fgpqatreys rgaspewlhi
      241 hggfertt
//
LOCUS       XP_040944904             647 aa            linear   PLN 06-AUG-2024
DEFINITION  LRR receptor-like serine/threonine-protein kinase RGI5 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_040944904
VERSION     XP_040944904.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088970.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..647
                     /product="LRR receptor-like serine/threonine-protein
                     kinase RGI5 isoform X1"
                     /calculated_mol_wt=70006
     Region          36..>627
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          112..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          307..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..354
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          379..403
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          404..424
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          430..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          453..476
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          477..500
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          506..530
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          531..554
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          555..578
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          579..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..647
                     /gene="LOC121214763"
                     /coded_by="XM_041088970.1:602..2545"
                     /db_xref="GeneID:121214763"
ORIGIN      
        1 mtkmgcqmlw lplaltlmma tvstggstve ecdpgdlkgl asfrggihmd tsgrlakwvg
       61 rrccrwqgvs cnnetgrvte vhlpgfissv dfvflsqmeg wfspsitllt slevldlggl
      121 aglsgripts igllknlrkl ylygnklrgs vpesigkllk leelhlhenr lsgflpptlg
      181 clknlnalll hsnrftgsip asfsnltnlm hldlhansit ghipqnigdl qllkeidlsd
      241 nllngeipas vnnltsisvm yldanhlege ipfpsnygqm pllgflrlqn nqlggkippn
      301 lgylvslqrv slennklega ipsslgnlea ltelylngnk lsgvipksig qlshlilltl
      361 shnsiqgplp nemsalqnlq tldlsfnslt lnsiprwvak lpslsriyla gcgikgqipd
      421 mlkstpspiq eldlsandlt ggipawmgsl tqlyslnlsr nhlsssipas vadfqelgvl
      481 dlhsnnitas mehvfkigts fpggsltyvd lsdnsftsgi qqisvgtler vvylnlshnl
      541 qegklptsme klkalqsldl synkfgfglv ealanlshle tlklqrnqft gripaeflnl
      601 knlkdldlsd nllvgeipag rplsdfpqsc ftgntglcgk plspcks
//
LOCUS       XP_040944905             553 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At1g35710
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944905
VERSION     XP_040944905.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088971.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..553
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At1g35710 isoform X2"
                     /calculated_mol_wt=59826
     Region          7..>533
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          18..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          139..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..236
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          237..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          261..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..436
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          437..460
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          461..484
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          485..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..553
                     /gene="LOC121214763"
                     /coded_by="XM_041088971.1:815..2476"
                     /db_xref="GeneID:121214763"
ORIGIN      
        1 mklmegwfsp sitlltslev ldlgglagls griptsigll knlrklylyg nklrgsvpes
       61 igkllkleel hlhenrlsgf lpptlgclkn lnalllhsnr ftgsipasfs nltnlmhldl
      121 hansitghip qnigdlqllk eidlsdnlln geipasvnnl tsisvmylda nhlegeipfp
      181 snygqmpllg flrlqnnqlg gkippnlgyl vslqrvslen nklegaipss lgnlealtel
      241 ylngnklsgv ipksigqlsh lilltlshns iqgplpnems alqnlqtldl sfnsltlnsi
      301 prwvaklpsl sriylagcgi kgqipdmlks tpspiqeldl sandltggip awmgsltqly
      361 slnlsrnhls ssipasvadf qelgvldlhs nnitasmehv fkigtsfpgg sltyvdlsdn
      421 sftsgiqqis vgtlervvyl nlshnlqegk lptsmeklka lqsldlsynk fgfglveala
      481 nlshletlkl qrnqftgrip aeflnlknlk dldlsdnllv geipagrpls dfpqscftgn
      541 tglcgkplsp cks
//
LOCUS       XP_016692666             666 aa            linear   PLN 06-AUG-2024
DEFINITION  hydroxyproline O-galactosyltransferase GALT4 [Gossypium hirsutum].
ACCESSION   XP_016692666
VERSION     XP_016692666.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837177.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..666
                     /product="hydroxyproline O-galactosyltransferase GALT4"
                     /calculated_mol_wt=76083
     Region          <154..666
                     /region_name="PLN03133"
                     /note="beta-1,3-galactosyltransferase; Provisional"
                     /db_xref="CDD:215596"
     CDS             1..666
                     /gene="LOC107909590"
                     /coded_by="XM_016837177.2:277..2277"
                     /db_xref="GeneID:107909590"
ORIGIN      
        1 mklakfdslv slsrlrlvqf lmgvlflyll fisfeiplvf kttsagfytd alprplfves
       61 eedftdksap arptddpelv rlagsrtppr rmweykevsg llfnessfds ndskdefsvl
      121 hktarhafvv gkklwddlqs pqnksdsepe rqnqkqnrtg scpesislsg sefvnrsrvl
      181 vipcgltlgs hitvigmphw ahaeydpkia ilkegdesvm vtqfmmelqg lktvegedpp
      241 rilhfnprlk gdwsgkpvie qntcyrmqwg talrcagwks radeetvdgq vkcekwirdd
      301 engseeskat wwlkrligrk nkvaldwpyp faegrlfvlt lsaglegyhv nvdgrhvtsf
      361 pyrtgfvled atglslkgdl dvhsvfaaal ptshpsfapq khlerlskwk applpegdve
      421 lfigvlsagn hfaermavrk swvqhkliks skvvarffva lngrkdinve lkkeaeyfgd
      481 ivivpymdny dlvvlktvai ceygirtvaa kyimkcdddt fvrvdpvike akklgdrsly
      541 ignmnyyhkp lrngkwavty eewpeeeypp yangpgyivs sdiaqfivde fenhklrlfk
      601 medvsmgmwv ekfnsskave yqhslkfcqf gciedyytah yqsprqmlcm wdklqkqgkp
      661 qccnmr
//
LOCUS       XP_016692664             750 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016692664
VERSION     XP_016692664.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837175.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692664.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..750
                     /product="pentatricopeptide repeat-containing protein
                     At1g05670, mitochondrial"
                     /calculated_mol_wt=85834
     Region          <182..>608
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          257..284
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          292..319
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          327..354
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          362..389
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          397..424
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          430..459
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          465..491
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          500..529
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          535..564
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          570..594
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          605..669
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          608..634
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          638..687
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          675..704
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          677..709
                     /region_name="PPR"
                     /note="pentatricopeptide repeat domain (PPR motif);
                     TIGR00756"
                     /db_xref="CDD:273253"
     Region          710..739
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..750
                     /gene="LOC107909587"
                     /coded_by="XM_016837175.2:492..2744"
                     /db_xref="GeneID:107909587"
ORIGIN      
        1 mikfavssls hcfqllshcy pqsfapksgp pffkrylgpi lhlsdsantr pfpnyspkkp
       61 tvkdselvhq isnaiklrrs epvcrvlkpy eskfrsdhli wvlmnikgey rlvldffewa
      121 clrrdptlea rciviqiava skdlkmahql ihdfwskpdl diglsfsyil erliytykdw
      181 gsdpkvfdvf frvlvevgll degkklfdkm lnygliisvd slniylsklr dhfdgfwrai
      241 kvffelpdvg icwniasyni iihslcqlgk ikeshrlllq melrgcipdv vtystiidgy
      301 chvgrlqmvl rlidemqska lrpnpytyss iinllcetgk vveaekalre mlnqgilpds
      361 vvyttlidgf cklgniafay kllnemqgrk iipdlltyts iicglcrigk mteacnifqe
      421 mlgrglepde ftytalidgy ckagemkeaf slhnqmvqmg lipnvvtyta ladglckcge
      481 vdtanellhe mcvrglqpni ftynslvngl cksgniaqai klmddmetag lhpnvitytt
      541 lmdaycktge mdkayellrk mldrriqptl vtfnvlmngf cmsgmledge kllqwllekg
      601 ikpnattyny lmkqycirkd mcataamwkg mcaqgvmpda nsynilikgh ckarnmkeaw
      661 flrremiekg ydltatsynd likgfikrkk lkeareifde mrqkgmaadk eiycyfvdin
      721 yeegnmettl elcdevlenc lvtklnnenk
//
LOCUS       XP_016692665             750 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016692665
VERSION     XP_016692665.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837176.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692665.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..750
                     /product="pentatricopeptide repeat-containing protein
                     At1g05670, mitochondrial"
                     /calculated_mol_wt=85834
     Region          <182..>608
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          257..284
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          292..319
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          327..354
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          362..389
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          397..424
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          430..459
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          465..491
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          500..529
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          535..564
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          570..594
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          605..669
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          608..634
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          638..687
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          675..704
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          677..709
                     /region_name="PPR"
                     /note="pentatricopeptide repeat domain (PPR motif);
                     TIGR00756"
                     /db_xref="CDD:273253"
     Region          710..739
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..750
                     /gene="LOC107909587"
                     /coded_by="XM_016837176.2:233..2485"
                     /db_xref="GeneID:107909587"
ORIGIN      
        1 mikfavssls hcfqllshcy pqsfapksgp pffkrylgpi lhlsdsantr pfpnyspkkp
       61 tvkdselvhq isnaiklrrs epvcrvlkpy eskfrsdhli wvlmnikgey rlvldffewa
      121 clrrdptlea rciviqiava skdlkmahql ihdfwskpdl diglsfsyil erliytykdw
      181 gsdpkvfdvf frvlvevgll degkklfdkm lnygliisvd slniylsklr dhfdgfwrai
      241 kvffelpdvg icwniasyni iihslcqlgk ikeshrlllq melrgcipdv vtystiidgy
      301 chvgrlqmvl rlidemqska lrpnpytyss iinllcetgk vveaekalre mlnqgilpds
      361 vvyttlidgf cklgniafay kllnemqgrk iipdlltyts iicglcrigk mteacnifqe
      421 mlgrglepde ftytalidgy ckagemkeaf slhnqmvqmg lipnvvtyta ladglckcge
      481 vdtanellhe mcvrglqpni ftynslvngl cksgniaqai klmddmetag lhpnvitytt
      541 lmdaycktge mdkayellrk mldrriqptl vtfnvlmngf cmsgmledge kllqwllekg
      601 ikpnattyny lmkqycirkd mcataamwkg mcaqgvmpda nsynilikgh ckarnmkeaw
      661 flrremiekg ydltatsynd likgfikrkk lkeareifde mrqkgmaadk eiycyfvdin
      721 yeegnmettl elcdevlenc lvtklnnenk
//
LOCUS       XP_016692663             635 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: LEAF RUST 10 DISEASE-RESISTANCEUS
            RECEPTOR-LIKE PROTEIN KINASE-like 1.5 [Gossypium hirsutum].
ACCESSION   XP_016692663
VERSION     XP_016692663.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837174.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692663.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..635
                     /product="LOW QUALITY PROTEIN: LEAF RUST 10
                     DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
                     1.5"
                     /calculated_mol_wt=70355
     Region          <194..234
                     /region_name="WAK_assoc"
                     /note="Wall-associated receptor kinase C-terminal;
                     pfam14380"
                     /db_xref="CDD:464161"
     Region          325..602
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(325..329,333,345,347,380,396..399,403,405,447,449,
                     451..452,454,465,468,491..494)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(325..329,333,345,347,380,396..399,403,447,449,
                     451..452,454,465)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(329,403,405,447,449,451,468,491..494)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(464..471,482..484,490..494)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..635
                     /gene="LOC107909586"
                     /coded_by="XM_016837174.2:133..2040"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107909586"
ORIGIN      
        1 mpspsppsis llllttiffi sfewvvteaa tlphhpcsst spcppftspp pfpfsfsagc
       61 ghpsfpincs tpsstisinn lsfsllyfdp nstsltlspl pptttspcss fnflhinlsg
      121 spfrisdasc srlsilrscs psnisncdqc awecgitkhp lklfndcgpt rqlpeqgcqp
      181 dvlgylqnff fkmgfqvewd eaqdsyfssc rdcklkngic gfnssdpnkp flcfqakati
      241 sptlihvdht hriailssvl tltciflifs vtfvffrskk fksqsvedpt alflrrhrsa
      301 sllppvftye elesstnkfd perkigdggf gsvylgqlhd nrivavkylh knnqsgntls
      361 skffcneili lssinhpnlv klhgycsdpr glllvydyvp ngtladhlhg rpkpsltwpv
      421 rleialqtal aieylhfsvv ppivhrdvtt snifvxkdmr ikvgdfglsr llafpenssl
      481 ksefvwtgpq gtpgyldpdy hrsfrlteks dvysfgvvll elisglkavd qrrekremal
      541 adlvvskiqm gllhqvvdpa lildgqpmdg veavaelafr cvaadkddrp dareivgelk
      601 riknrtrvlr lsysngsnge vakddnigmf dvtwd
//
LOCUS       XP_016692662             526 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692662
VERSION     XP_016692662.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837173.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692662.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="uncharacterized protein"
                     /calculated_mol_wt=58319
     Region          1..142
                     /region_name="beta-trefoil_FSCN-like"
                     /note="fascin-like domain, beta-trefoil fold, found in the
                     fascin-like family; cl49611"
                     /db_xref="CDD:483951"
     Region          224..365
                     /region_name="DUF569"
                     /note="Domain of unknown function (DUF569); pfam04601"
                     /db_xref="CDD:282459"
     CDS             1..526
                     /gene="LOC107909585"
                     /coded_by="XM_016837173.2:571..2151"
                     /db_xref="GeneID:107909585"
ORIGIN      
        1 meiftkakav klrghlekyl vadddqeavr qsrnssgkra rwfvelvhdk pnvvrlrsch
       61 gkylaatdip fllgmtgnkv lqtvpdkmdw klqwepirdg fqiklktwcg kflranggtp
      121 pwrnsithde phtgatqrwi lwdveavqvp esdsvleyis svssfssvsd dvlealsddv
      181 lgsgpqspis vvssvksprf svfstgsakl spkqvnsnky qagmdlflna kavrlrghhd
      241 kylvaeedee svsqdrngss ksarwtvefv pgseniirlk sfynkyltas nqpfllgmtg
      301 rkviqslprr ldssvewepi kvgsqaklkt rygnflrang glppwrnsvt hdiphrtatq
      361 dwvlwdvdiv eiqvqspgsg lrpsappavp hadslnfept spsavsaksg hfsrqessdp
      421 yvgssppkse grtiyyhvad engevddeav egysfsfkgn gvdelthklk ektgledvvv
      481 ctrsplngkl fplrlqlppn nsdmhvvvvp laskvgrnfa kqginm
//
LOCUS       XP_016692661             287 aa            linear   PLN 06-AUG-2024
DEFINITION  dnaJ homolog subfamily B member 1 [Gossypium hirsutum].
ACCESSION   XP_016692661
VERSION     XP_016692661.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837172.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..287
                     /product="dnaJ homolog subfamily B member 1"
                     /calculated_mol_wt=31950
     Region          4..277
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..287
                     /gene="LOC107909584"
                     /coded_by="XM_016837172.2:290..1153"
                     /db_xref="GeneID:107909584"
ORIGIN      
        1 mgvdyynilk vsrnatdddl rksykrlark whpdknlvnn keaeakckqi feaynvlsdp
       61 lkrqiydlhg eqglnsaess spngfsaggv ggmadkfdqr ngqgykkasp vetqllcsle
      121 elykggrrrm risrsipgef gklktveeil kidikpgwkk gtkitfpekg nqepgftpsd
      181 lifvvdekph aifkrdgndl iatlkislle altgtilslt tldgrtlpis vtdivnpghe
      241 vvipnegmpi skepskrghl kiqfdiifps klsaeqkcdl rralsqr
//
LOCUS       XP_016692659             524 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 2, chloroplastic isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692659
VERSION     XP_016692659.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837170.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692659.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..524
                     /product="protein PTST homolog 2, chloroplastic isoform
                     X1"
                     /calculated_mol_wt=58545
     Region          <342..>448
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          450..523
                     /region_name="E_set_AMPKbeta_like_N"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; cd02859"
                     /db_xref="CDD:199889"
     CDS             1..524
                     /gene="LOC107909583"
                     /coded_by="XM_016837170.2:254..1828"
                     /db_xref="GeneID:107909583"
ORIGIN      
        1 matftsstyt fvsphsflth frarvfpscf ceinpgnkgn svslklnlvr glvfgedkkr
       61 vswwsccckk gwdndgdlal eadilefmkn sdkpeafpsk kelvdagrmd lvegikrqgg
      121 wlamgwdldd ddehgfqekg fpeagvkdwd llekekkwdn qtfqeraqse aeisgasyla
      181 vnsssstsss grslevaakd dcgvegilsr lerernvnfg igfrdkgdnt cpqtncteee
      241 slvqastdvt vggphrrklm sfsgssglgn dttakfiqdq plsgidglrn ptwrewslqr
      301 agiagkefed isgygtleir nksneldrrk esrasgkdin hneiqdrleh lklelssvlq
      361 slrsnvdevl sregdessid nfhklsdase fqeneisnaq dklrslrarl avlegkmtla
      421 iidaqktvee kqkriddarr alqllrtaci vwpnsgsevl lagsfdgwat krkmeksstg
      481 vfslqlklyp gkyeikfivd gewkldplrp ivnngfennl llit
//
LOCUS       XP_016692660             500 aa            linear   PLN 06-AUG-2024
DEFINITION  protein PTST homolog 2, chloroplastic isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692660
VERSION     XP_016692660.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837171.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692660.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..500
                     /product="protein PTST homolog 2, chloroplastic isoform
                     X2"
                     /calculated_mol_wt=56020
     Region          <318..>424
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          426..499
                     /region_name="E_set_AMPKbeta_like_N"
                     /note="N-terminal Early set domain, a glycogen binding
                     domain, associated with the catalytic domain of
                     AMP-activated protein kinase beta subunit; cd02859"
                     /db_xref="CDD:199889"
     CDS             1..500
                     /gene="LOC107909583"
                     /coded_by="XM_016837171.2:255..1757"
                     /db_xref="GeneID:107909583"
ORIGIN      
        1 matftsstyt fvsphsflth frarvfpscf ceinpgnkgn svslklnlvr glvfgedkkr
       61 vswwsccckk gwdndgdlal eadilefmkn sdkpeafpsk kelvdagrmd lvegikrqgg
      121 wlamgwdldd ddehgfqekg fpeagvkdwd llekekkwdn qtfqeraqse aeisgasyla
      181 vnsssstsss grslevaakd dcgvegilsr lerernvnfg igfrdkvggp hrrklmsfsg
      241 ssglgndtta kfiqdqplsg idglrnptwr ewslqragia gkefedisgy gtleirnksn
      301 eldrrkesra sgkdinhnei qdrlehlkle lssvlqslrs nvdevlsreg dessidnfhk
      361 lsdasefqen eisnaqdklr slrarlavle gkmtlaiida qktveekqkr iddarralql
      421 lrtacivwpn sgsevllags fdgwatkrkm eksstgvfsl qlklypgkye ikfivdgewk
      481 ldplrpivnn gfennlllit
//
LOCUS       XP_016692656             268 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HAT5 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692656
VERSION     XP_016692656.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837167.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692656.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..268
                     /product="homeobox-leucine zipper protein HAT5 isoform X1"
                     /calculated_mol_wt=30320
     Region          42..96
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          97..138
                     /region_name="HALZ"
                     /note="Homeobox associated leucine zipper; pfam02183"
                     /db_xref="CDD:460477"
     CDS             1..268
                     /gene="LOC107909582"
                     /coded_by="XM_016837167.2:1559..2365"
                     /db_xref="GeneID:107909582"
ORIGIN      
        1 meplwtpsst ssvlqgekpv meyeyvnggd dldgscqpag vkkrrltatq veflersfev
       61 enklesdrkl rlakelglqp rqvaiwfqnr rarsknkqle kdydslratf dklkadfdnl
      121 lkekddlknq vlalkeklli kekgmenlgs veaihssnde pqkpnpdash vpllackqee
      181 acsaksdvfd sdsphytdgh gyhssfiept dssnvfepdq sdeeddlsks llhpplffpk
      241 fdcyydapat scnfslpved qsfwssly
//
LOCUS       XP_016692657             248 aa            linear   PLN 06-AUG-2024
DEFINITION  homeobox-leucine zipper protein HAT5 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692657
VERSION     XP_016692657.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837168.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692657.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..248
                     /product="homeobox-leucine zipper protein HAT5 isoform X2"
                     /calculated_mol_wt=28164
     Region          22..76
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          77..118
                     /region_name="HALZ"
                     /note="Homeobox associated leucine zipper; pfam02183"
                     /db_xref="CDD:460477"
     CDS             1..248
                     /gene="LOC107909582"
                     /coded_by="XM_016837168.2:108..854"
                     /db_xref="GeneID:107909582"
ORIGIN      
        1 meyeyvnggd dldgscqpag vkkrrltatq veflersfev enklesdrkl rlakelglqp
       61 rqvaiwfqnr rarsknkqle kdydslratf dklkadfdnl lkekddlknq vlalkeklli
      121 kekgmenlgs veaihssnde pqkpnpdash vpllackqee acsaksdvfd sdsphytdgh
      181 gyhssfiept dssnvfepdq sdeeddlsks llhpplffpk fdcyydapat scnfslpved
      241 qsfwssly
//
LOCUS       XP_016692654             202 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-3 complex subunit beta-2 [Gossypium hirsutum].
ACCESSION   XP_016692654
VERSION     XP_016692654.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837165.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692654.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="AP-3 complex subunit beta-2"
                     /calculated_mol_wt=22599
     Region          41..>187
                     /region_name="COG5096"
                     /note="Vesicle coat complex, various subunits
                     [Intracellular trafficking, secretion, and vesicular
                     transport]"
                     /db_xref="CDD:227427"
     CDS             1..202
                     /gene="LOC107909581"
                     /coded_by="XM_016837165.2:229..837"
                     /db_xref="GeneID:107909581"
ORIGIN      
        1 mfpqfgatae tlskastmvf rigidahpyd dsddvsiapl ldskfdsekc ealkrllali
       61 tqgfdvsnyf pqvvknvasq slevnklvyl yllhyaekrp neallsincf qkdlgdpnpl
      121 vrawalrtma rirlhviapl vlvavgkcar dpsvyvrkca asalpsvhdl rleehtstie
      181 evhlidlflh gyfcfhvihh ll
//
LOCUS       XP_040944906             202 aa            linear   PLN 06-AUG-2024
DEFINITION  AP-3 complex subunit beta-2 [Gossypium hirsutum].
ACCESSION   XP_040944906
VERSION     XP_040944906.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088972.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="AP-3 complex subunit beta-2"
                     /calculated_mol_wt=22599
     Region          41..>187
                     /region_name="COG5096"
                     /note="Vesicle coat complex, various subunits
                     [Intracellular trafficking, secretion, and vesicular
                     transport]"
                     /db_xref="CDD:227427"
     CDS             1..202
                     /gene="LOC107909581"
                     /coded_by="XM_041088972.1:294..902"
                     /db_xref="GeneID:107909581"
ORIGIN      
        1 mfpqfgatae tlskastmvf rigidahpyd dsddvsiapl ldskfdsekc ealkrllali
       61 tqgfdvsnyf pqvvknvasq slevnklvyl yllhyaekrp neallsincf qkdlgdpnpl
      121 vrawalrtma rirlhviapl vlvavgkcar dpsvyvrkca asalpsvhdl rleehtstie
      181 evhlidlflh gyfcfhvihh ll
//
LOCUS       XP_016692653             496 aa            linear   PLN 06-AUG-2024
DEFINITION  3-ketoacyl-CoA synthase 6 [Gossypium hirsutum].
ACCESSION   XP_016692653
VERSION     XP_016692653.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837164.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692653.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..496
                     /product="3-ketoacyl-CoA synthase 6"
                     /calculated_mol_wt=55784
     Region          6..490
                     /region_name="PLN02377"
                     /note="3-ketoacyl-CoA synthase"
                     /db_xref="CDD:166018"
     CDS             1..496
                     /gene="LOC107909579"
                     /coded_by="XM_016837164.2:174..1664"
                     /db_xref="GeneID:107909579"
ORIGIN      
        1 mppaspdfss svklkyvklg yqyvvdhflt lllvpvmvgi lievvrlgpq eivnlwnslh
       61 fdliqilcss ffiifiatvy fmskprciyl vdyacykppv tcrvpfatfm ehsrlilsnn
      121 pksvefqmri lersglgeet clppaihyip pkptmeaarg eaevvifsam dslfkktglk
      181 pkdidilivn cslfsptpsl samvinkykl rsniksfnls gmgcsaglis idlardllqv
      241 hpnsnavvvs teiitpnyyq gneramllpn clfrmggaai llsnrrserr rakyrlvhvv
      301 rthkgaddka yrcvfeeedk dgkvgislsk dlmaiageal ksnittigpl vlpgseqllf
      361 lltligrkvf npkwkpyipd fklafehfci haggravide lqknlqlsae hveasrmtlh
      421 rfgntssssl wyemsyleak grmkkgdriw qiafgsgfkc nsavwkcnrt ikkptdgpwe
      481 dcihrypvhi pevvkl
//
LOCUS       XP_016692652             327 aa            linear   PLN 06-AUG-2024
DEFINITION  homocysteine S-methyltransferase 1 [Gossypium hirsutum].
ACCESSION   XP_016692652
VERSION     XP_016692652.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837163.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..327
                     /product="homocysteine S-methyltransferase 1"
                     /calculated_mol_wt=35435
     Region          1..325
                     /region_name="PLN02489"
                     /note="homocysteine S-methyltransferase"
                     /db_xref="CDD:215269"
     CDS             1..327
                     /gene="LOC107909578"
                     /coded_by="XM_016837163.2:209..1192"
                     /db_xref="GeneID:107909578"
ORIGIN      
        1 mgfekgasll edliekaggc avmdggfatq leshgasind plwsalclik dphlikqvhl
       61 eyleagadil vtssyqatip gflsrglsle egesllkksv klaveardkf wdrvgcvpgn
      121 synralvaas igsygaylad gseysgcygp gvnldklkdf hrrrlqvive agpdllafet
      181 ipnkleaqac velleeeniq ipswicfssv dgenapsges fkecfeilnk skkvnavgin
      241 casphfiesl vckfkelttk aivvypnsga iwdgrakkwl psmcfgdeef elcaprwrnq
      301 gakviggccr ttpstirais kalkets
//
LOCUS       XP_016692651             231 aa            linear   PLN 06-AUG-2024
DEFINITION  LOB domain-containing protein 42 [Gossypium hirsutum].
ACCESSION   XP_016692651
VERSION     XP_016692651.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837162.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..231
                     /product="LOB domain-containing protein 42"
                     /calculated_mol_wt=25310
     Region          4..107
                     /region_name="LOB"
                     /note="Lateral organ boundaries (LOB) domain; pfam03195"
                     /db_xref="CDD:460843"
     CDS             1..231
                     /gene="LOC107909577"
                     /coded_by="XM_016837162.2:139..834"
                     /db_xref="GeneID:107909577"
ORIGIN      
        1 mrmscngcrv lrkgctenct irpclqwiks sdsqanatlf lakfygragl lnlieagpen
       61 lrpaifrsll yeacgrvvnp vygsigmlws gnwgecqaav davlkgspit qtssslesve
      121 eeqpisplkt ydirhvfkdt kpaaaadidk vktrtrfkrs rtrskrqvvd swmsqlgngd
      181 skedestfsv etvegslvnh akrgpilkfe dssnvglelt lallpeathl g
//
LOCUS       XP_016692650             191 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692650
VERSION     XP_016692650.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837161.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..191
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20580
     Region          62..157
                     /region_name="DUF1218"
                     /note="Protein of unknown function (DUF1218); pfam06749"
                     /db_xref="CDD:462000"
     CDS             1..191
                     /gene="LOC107909576"
                     /coded_by="XM_016837161.2:178..753"
                     /db_xref="GeneID:107909576"
ORIGIN      
        1 mgegkgstlv hllvvvlslv afgfaiaaer rrsvgtvvkd ditnstycvy nsdvatgygv
       61 gaflfllsge sllmgvtkcm cfgrplapgs drawsiiyfv sswltflvae acliagatrn
      121 ayhtkyrgmi yaqnfscetl rkgvfiagav fvvatmilnv yyymyfakat ttmpahkanr
      181 tnstvgmtgy a
//
LOCUS       XP_040944907             191 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944907
VERSION     XP_040944907.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088973.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..191
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20580
     Region          62..157
                     /region_name="DUF1218"
                     /note="Protein of unknown function (DUF1218); pfam06749"
                     /db_xref="CDD:462000"
     CDS             1..191
                     /gene="LOC107909576"
                     /coded_by="XM_041088973.1:159..734"
                     /db_xref="GeneID:107909576"
ORIGIN      
        1 mgegkgstlv hllvvvlslv afgfaiaaer rrsvgtvvkd ditnstycvy nsdvatgygv
       61 gaflfllsge sllmgvtkcm cfgrplapgs drawsiiyfv sswltflvae acliagatrn
      121 ayhtkyrgmi yaqnfscetl rkgvfiagav fvvatmilnv yyymyfakat ttmpahkanr
      181 tnstvgmtgy a
//
LOCUS       XP_016692647             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692647
VERSION     XP_016692647.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837158.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19322
     CDS             1..179
                     /gene="LOC107909575"
                     /coded_by="XM_016837158.2:403..942"
                     /db_xref="GeneID:107909575"
ORIGIN      
        1 mqcgiqqsei gscsdemrss isvsvtdrke tmvcpkprrl gllntpfndh pvrslrwqls
       61 hqvelcdske esdaldfilt kggcgveqgc tqvalsppff cgsppsrvsn pliqdarfge
      121 qkimssvpps sglyssspss ssrkgsyvra nfgskpavrv egfdcldrdr qncsisala
//
LOCUS       XP_016692649             179 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692649
VERSION     XP_016692649.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837160.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..179
                     /product="uncharacterized protein"
                     /calculated_mol_wt=19322
     CDS             1..179
                     /gene="LOC107909575"
                     /coded_by="XM_016837160.2:346..885"
                     /db_xref="GeneID:107909575"
ORIGIN      
        1 mqcgiqqsei gscsdemrss isvsvtdrke tmvcpkprrl gllntpfndh pvrslrwqls
       61 hqvelcdske esdaldfilt kggcgveqgc tqvalsppff cgsppsrvsn pliqdarfge
      121 qkimssvpps sglyssspss ssrkgsyvra nfgskpavrv egfdcldrdr qncsisala
//
LOCUS       XP_016692642             150 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692642
VERSION     XP_016692642.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837153.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..150
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16363
     Region          16..60
                     /region_name="Retrotran_gag_3"
                     /note="gag-polypeptide of LTR copia-type; pfam14244"
                     /db_xref="CDD:464114"
     Region          <79..114
                     /region_name="Ribosomal_L27A"
                     /note="Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A;
                     cl46651"
                     /db_xref="CDD:480991"
     CDS             1..150
                     /gene="LOC107909572"
                     /coded_by="XM_016837153.2:207..659"
                     /db_xref="GeneID:107909572"
ORIGIN      
        1 malidptlps npyyfhpnen palvlvspal srsnyhswsr amtmallskk klkfvdgtip
       61 vsirtdplys awercntmil gdgelnvkln lkarafsasa kekleaagcs ltvlpgrkkw
      121 akpsvaknla qaeeyfakkr aasssdytsa
//
LOCUS       XP_016692644             132 aa            linear   PLN 06-AUG-2024
DEFINITION  MLP-like protein 31 [Gossypium hirsutum].
ACCESSION   XP_016692644
VERSION     XP_016692644.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837155.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..132
                     /product="MLP-like protein 31"
                     /calculated_mol_wt=14808
     Region          1..131
                     /region_name="Bet_v_1"
                     /note="Pathogenesis-related protein Bet v I family;
                     smart01037"
                     /db_xref="CDD:198105"
     Site            order(2..3,6,10,17,36,38..39,44,47,49,61,63,65,69,77,79,
                     81,83,94,96,98,100,112..113,115..116,119..120,122..124)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176858"
     Site            order(25,27..34)
                     /site_type="active"
                     /note="glycine-rich loop [active]"
                     /db_xref="CDD:176858"
     CDS             1..132
                     /gene="LOC107909573"
                     /coded_by="XM_016837155.2:117..515"
                     /db_xref="GeneID:107909573"
ORIGIN      
        1 mfahkphhvh htcygkiqgc dlhegkwgkv gtivhwsyvh dgeakkakev veavdpdknl
       61 itfrviegdl meeyksfvat ilvspkseds gsvvhwtley eklhdgiadp etllqlvqdi
      121 skdiddhliq an
//
LOCUS       XP_016692645             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692645
VERSION     XP_016692645.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837156.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11779
     CDS             1..105
                     /gene="LOC107909574"
                     /coded_by="XM_016837156.2:91..408"
                     /db_xref="GeneID:107909574"
ORIGIN      
        1 mseesskqlk krgqpnhfpt gnqktnkrit dqkarlenre ivvklteaap ivkqlleafs
       61 sinegnllqt vtyirerrfa vlvssllssq tkdhvthamf lmgsl
//
LOCUS       XP_040944909             105 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944909
VERSION     XP_040944909.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088975.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..105
                     /product="uncharacterized protein"
                     /calculated_mol_wt=11779
     CDS             1..105
                     /gene="LOC107909574"
                     /coded_by="XM_041088975.1:90..407"
                     /db_xref="GeneID:107909574"
ORIGIN      
        1 mseesskqlk krgqpnhfpt gnqktnkrit dqkarlenre ivvklteaap ivkqlleafs
       61 sinegnllqt vtyirerrfa vlvssllssq tkdhvthamf lmgsl
//
LOCUS       XP_016692641             267 aa            linear   PLN 06-AUG-2024
DEFINITION  50S ribosomal protein L15, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_016692641
VERSION     XP_016692641.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837152.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..267
                     /product="50S ribosomal protein L15, chloroplastic"
                     /calculated_mol_wt=28537
     Region          77..231
                     /region_name="RplO"
                     /note="Ribosomal protein L15 [Translation, ribosomal
                     structure and biogenesis]; COG0200"
                     /db_xref="CDD:439970"
     CDS             1..267
                     /gene="LOC107909570"
                     /coded_by="XM_016837152.2:146..949"
                     /db_xref="GeneID:107909570"
ORIGIN      
        1 maamlslspn ppittlpslr stfkgnlrnl qpnpfhiiri rtkqqgveaq kgtrslvvvn
       61 qaattqvsvt asnvrfrldn lgpqpgsrkk gkrkgrgisa gqggscgfgm rgqksrsgpg
      121 vrkgfeggqm plyrripklr giaggmhagl pkyipvnlkd ietagfqegd evsletlkek
      181 glinpsgrer klplkilgdg elkvklnlka rafsasakek leaagcsltv lpgrkkwvkp
      241 svaknlarae eyfakkraas ssdstsa
//
LOCUS       XP_040944910             254 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein JAGGED isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944910
VERSION     XP_040944910.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088976.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..254
                     /product="zinc finger protein JAGGED isoform X1"
                     /calculated_mol_wt=27891
     Region          50..76
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..254
                     /gene="LOC107909569"
                     /coded_by="XM_041088976.1:734..1498"
                     /db_xref="GeneID:107909569"
ORIGIN      
        1 mrpeknpldl nnlpddytrd gkqvfeegss agyrtkksgg rdgkdecgkv yecrfcslkf
       61 cksqalgghm nrhrqerete tlnrarqlvf sndnlatpgn pgyhpsyhpa gnlgdptlpf
      121 rtvcpprlfs assnlmpptp ilqppqpylh pspsrlssth lpqypahsvn dyyvghalgs
      181 stlshsqyhp qnlnylgvsd snytcigapv gngfdhgstr gadlvgsgrv vsgfrdvtqq
      241 hldhpptnrf qdgf
//
LOCUS       XP_016692640             253 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein JAGGED isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692640
VERSION     XP_016692640.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837151.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="zinc finger protein JAGGED isoform X2"
                     /calculated_mol_wt=27820
     Region          49..75
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..253
                     /gene="LOC107909569"
                     /coded_by="XM_016837151.2:503..1264"
                     /db_xref="GeneID:107909569"
ORIGIN      
        1 mrpeknpldl nnlpddytrd gkqvfeegss gyrtkksggr dgkdecgkvy ecrfcslkfc
       61 ksqalgghmn rhrqeretet lnrarqlvfs ndnlatpgnp gyhpsyhpag nlgdptlpfr
      121 tvcpprlfsa ssnlmpptpi lqppqpylhp spsrlssthl pqypahsvnd yyvghalgss
      181 tlshsqyhpq nlnylgvsds nytcigapvg ngfdhgstrg adlvgsgrvv sgfrdvtqqh
      241 ldhpptnrfq dgf
//
LOCUS       XP_016692639             324 aa            linear   PLN 06-AUG-2024
DEFINITION  IST1 homolog [Gossypium hirsutum].
ACCESSION   XP_016692639
VERSION     XP_016692639.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837150.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..324
                     /product="IST1 homolog"
                     /calculated_mol_wt=35113
     Region          18..182
                     /region_name="Ist1"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     pfam03398"
                     /db_xref="CDD:460910"
     CDS             1..324
                     /gene="LOC107909568"
                     /coded_by="XM_016837150.2:193..1167"
                     /db_xref="GeneID:107909568"
ORIGIN      
        1 msllnqlfnr gvfgakcktc lslaisrikl lqnkrdlqlk nmrkeiaqfl qagqepiari
       61 rvehvireqn iwaayeilel fcefvlarvp ilesqkdcpp elreavasii faaprcsdvp
      121 dllqiknlfa tkygkefvia atelrpdsgv nraiieklsv saasgeirlk vlkeiaqeys
      181 vewdssgtea efnkkyedll agskqvcaea avsqapnkqa sgksspsnga ktilptdarp
      241 asqhhqvpsh mskltsseie ssvkngtagp isdiktetns rpsdvlerar aaiasaerat
      301 agaraaaelv nvkfgslklq gass
//
LOCUS       XP_040944912              96 aa            linear   PLN 06-AUG-2024
DEFINITION  endo-1,4-beta-xylanase 5 [Gossypium hirsutum].
ACCESSION   XP_040944912
VERSION     XP_040944912.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088978.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..96
                     /product="endo-1,4-beta-xylanase 5"
                     /calculated_mol_wt=10866
     CDS             1..96
                     /gene="LOC107909567"
                     /coded_by="XM_041088978.1:1162..1452"
                     /db_xref="GeneID:107909567"
ORIGIN      
        1 mvaghfskns ddrdiditid ssslqpfteq ewrfnqqfmi ntqrkravti hvsdqqgnrl
       61 qgavitinqv skdfpfgsai ahtilgnlpy qnwfve
//
LOCUS       XP_016692636             384 aa            linear   PLN 06-AUG-2024
DEFINITION  caffeoylshikimate esterase [Gossypium hirsutum].
ACCESSION   XP_016692636
VERSION     XP_016692636.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837147.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="caffeoylshikimate esterase"
                     /calculated_mol_wt=42879
     Region          39..384
                     /region_name="PLN02385"
                     /note="hydrolase; alpha/beta fold family protein"
                     /db_xref="CDD:215216"
     CDS             1..384
                     /gene="LOC107909565"
                     /coded_by="XM_016837147.1:145..1299"
                     /db_xref="GeneID:107909565"
ORIGIN      
        1 mdlsltfrsp spfllpkskp stlsiplisl kpsphrltva aaagkmkmie gvsdelnsia
       61 sqnldyaaar rrvrsafipv hqqldhllfk maptgvrtee wiernskgle iffrrwmpep
      121 gvkikgvvcf chgygdtctf ffegiarfia asgygvyaid hpgfglsegl hgyiysfdel
      181 adnvieqyak ikerpevrgl pcfilgqsmg gavtlkvhfk dphgwdgiil vapmckiadd
      241 vtpskpvlnf ltflskvmpt aklvpqkdla elmfrdprkk kmavynvicy ddrvrlrtav
      301 ellnatkeie eqvdkvsspl lilhgaadkv tdpvvsqfly enasskdktl klyeegyhci
      361 legepddril tvlndiiswl darc
//
LOCUS       XP_016692633             399 aa            linear   PLN 06-AUG-2024
DEFINITION  glycosyltransferase BC10 [Gossypium hirsutum].
ACCESSION   XP_016692633
VERSION     XP_016692633.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837144.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692633.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..399
                     /product="glycosyltransferase BC10"
                     /calculated_mol_wt=45943
     Region          130..357
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..399
                     /gene="LOC107909563"
                     /coded_by="XM_016837144.2:487..1686"
                     /db_xref="GeneID:107909563"
ORIGIN      
        1 mkgensnqsi sywklfnaqm hffnvlsyfl lfgcglslgv ilsfhlknys lalhitqlpl
       61 strsastlaq pppsqpfnpv sgtsygdrig lteflepphv mhdmddkell wraslaprip
      121 qypfhrvpkv aflfltkgpv plaplwekff kghqglysiy vhsdpsfnlt epegsvfhgr
      181 ripskevewg nvnmieaerr llanalmdys nqrfvllsea ciplfnfstv ysylinssqs
      241 fvesydlpgp vgrgrysrrm rpqvtiqqwr kgaqwfemdr dlaievvsdq iyfpvfqkyc
      301 kgacyadehy lptfvtmkfa nknsnrtltw vdwskggphp akfirtnvtv eflerlrsqs
      361 qcqyngnttd ichlfarkfs pdalyrllkf apkvmqfhe
//
LOCUS       XP_040944913             531 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944913
VERSION     XP_040944913.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088979.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..531
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=58900
     Region          212..392
                     /region_name="GloB"
                     /note="Glyoxylase or a related metal-dependent hydrolase,
                     beta-lactamase superfamily II [General function prediction
                     only]; COG0491"
                     /db_xref="CDD:440257"
     Region          424..>460
                     /region_name="BLACT_WH"
                     /note="Beta-lactamase associated winged helix domain;
                     pfam17778"
                     /db_xref="CDD:407650"
     CDS             1..531
                     /gene="LOC107909562"
                     /coded_by="XM_041088979.1:312..1907"
                     /db_xref="GeneID:107909562"
ORIGIN      
        1 mathnlavil knpsndaefl llkqtpppkf sedqydsyvd sdlwdlpstl lnlqhdhshs
       61 giviqgaqss hnidltkfdv qlaltgvlek lgltvndvge wslfkyveea efgpefpvnt
      121 vfimgnlldg nqncqglckw mstescltwl levkpcsdrv gplvvfalin dslqsaartl
      181 pptlryqeyp pgvvilpmrs ktrkpflttn lvifapkqvs dtvgdcsfva hgdalivdpg
      241 crheyheelk qiiaclpekl ivfvthhhld hveglsiiqk cnpnatllah entmrrigkg
      301 dwslgytsvs geedilvggh rltvifapgh tdshmalldv stnslivgdh cvgqgsaald
      361 itsggnmtey fqtsykflel sphtlipmhg rvnlwpknml cgylknrrsr eesilqaien
      421 gaetlfdiva nvysgvdrnl wtaaasnvrl hvdhldqqkk lpkefsvqrf hktwvpfflr
      481 wtcayvssri qfkcpklkis sllitgtvig iagyslgkka cfhlsktgkg a
//
LOCUS       XP_040944914             491 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944914
VERSION     XP_040944914.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088980.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..491
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=54250
     Region          212..392
                     /region_name="GloB"
                     /note="Glyoxylase or a related metal-dependent hydrolase,
                     beta-lactamase superfamily II [General function prediction
                     only]; COG0491"
                     /db_xref="CDD:440257"
     Region          424..>460
                     /region_name="BLACT_WH"
                     /note="Beta-lactamase associated winged helix domain;
                     pfam17778"
                     /db_xref="CDD:407650"
     CDS             1..491
                     /gene="LOC107909562"
                     /coded_by="XM_041088980.1:312..1787"
                     /db_xref="GeneID:107909562"
ORIGIN      
        1 mathnlavil knpsndaefl llkqtpppkf sedqydsyvd sdlwdlpstl lnlqhdhshs
       61 giviqgaqss hnidltkfdv qlaltgvlek lgltvndvge wslfkyveea efgpefpvnt
      121 vfimgnlldg nqncqglckw mstescltwl levkpcsdrv gplvvfalin dslqsaartl
      181 pptlryqeyp pgvvilpmrs ktrkpflttn lvifapkqvs dtvgdcsfva hgdalivdpg
      241 crheyheelk qiiaclpekl ivfvthhhld hveglsiiqk cnpnatllah entmrrigkg
      301 dwslgytsvs geedilvggh rltvifapgh tdshmalldv stnslivgdh cvgqgsaald
      361 itsggnmtey fqtsykflel sphtlipmhg rvnlwpknml cgylknrrsr eesilqaien
      421 gaetlfdiva nvysgvdrnl wtaaasnvrl hvdhldqqkk lpkgfsmenf igslvafesl
      481 vvafepnsgk l
//
LOCUS       XP_040944915             238 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein GIS3 [Gossypium hirsutum].
ACCESSION   XP_040944915
VERSION     XP_040944915.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088981.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..238
                     /product="zinc finger protein GIS3"
                     /calculated_mol_wt=24098
     Region          60..85
                     /region_name="zf-C2H2_6"
                     /note="C2H2-type zinc finger; pfam13912"
                     /db_xref="CDD:433576"
     CDS             1..238
                     /gene="LOC121214769"
                     /coded_by="XM_041088981.1:279..995"
                     /db_xref="GeneID:121214769"
ORIGIN      
        1 maeleyqant ktnsattarl klfgfnvsed ddvlessttk dpssgssepg gfpapgdrky
       61 ecqyccrefa nsqalgghqn ahkkerqqlk raqlqatrsa avsfarnpii safappphll
      121 asatpvvvpa aagpswvylp rggpppfhvs hgcvipsagg ggggggvgrg paglpygggg
      181 glgdpgvsvg pqvmqggghh grgvdgpslr rfskgdggps fddalgldlh lslaparp
//
LOCUS       XP_016692631             692 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At2g13600 [Gossypium
            hirsutum].
ACCESSION   XP_016692631
VERSION     XP_016692631.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837142.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="pentatricopeptide repeat-containing protein
                     At2g13600"
                     /calculated_mol_wt=77113
     Region          25..48
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          56..83
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          58..684
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          85..114
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          116..145
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          188..215
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          219..246
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          292..317
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          319..348
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          352..379
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          385..414
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          426..455
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          459..486
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          492..522
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          528..557
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..692
                     /gene="LOC107909559"
                     /coded_by="XM_016837142.2:185..2263"
                     /db_xref="GeneID:107909559"
ORIGIN      
        1 maklglhkqi vgdlslpdss pfakllgsyi qskslldirr lhvriiksnf asetfilnrl
       61 idaygrcgsl edagkvfnrm pqrnifswns visvltklgy vdeaagffys mpehdqcswn
      121 siisgfaqqd rfgealfyfv rmhredfvln eysfgsalsa csglknikig aqihaliakt
      181 rffsnvymgs alvdmygkcg svscgqrafd dmsernrvsw nslitcyeqn gpasaalqvf
      241 lrmmdcgiep deltyasvvs acaslsaiks gkqiharvvk cnklrddlvl gnalvdmyak
      301 cnkinearci fdrmpvrnvv setsmvsgya kvasvrtars mfakmmerni vswnaliagy
      361 tqngeneeal rlfrllkres vcpthytfgn llnacanltd lqlgrqahth vlkhgfrfqf
      421 geesdifvgn slidmymkcg svedanlvfk tmmerdwvsw namivgyaqn gygnkalelf
      481 knmlasgekp dhvtmigvlc acshaglled grhhfssmsr ehglvplkdh ytcmvdllgr
      541 agcldeaknl ietmpmkpdv vvwgsllgac kvhrnirlgk yvtekileid psnsgpyvll
      601 snmyaelgkw gdvvrvrklm rkrgvikqtg cswievqghv svfmvkdkkh pqrkaiysvl
      661 nalikqmkra gylpdagdev aheelatsaa vg
//
LOCUS       XP_016692628             428 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 15 [Gossypium hirsutum].
ACCESSION   XP_016692628
VERSION     XP_016692628.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837139.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..428
                     /product="probable protein phosphatase 2C 15"
                     /calculated_mol_wt=45545
     Region          44..297
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(46..47,73..75,249,288)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..428
                     /gene="LOC107909558"
                     /coded_by="XM_016837139.2:1538..2824"
                     /db_xref="GeneID:107909558"
ORIGIN      
        1 masgagrrrg helvplaali sremknekme kpsvrcghaa qsrkgedyfl vktdcqrvpg
       61 npsstfsvfa ifdghngnaa aiftrehlls hilsavprgl greewfqalp ralvagfvkt
      121 dkefqsrget sgttatfviv dawtvtvasv gdsrcildtq gggistltvd hrleenveer
      181 ervtasggev grlsiaggae igplrcwpgg lclsrsigdm dvgefivpip yvkqvklsna
      241 ggrliiasdg iwdalssema akscrglpae laarqvvkea lrtrglkddt tcivvdiipp
      301 esspppsplp kkpnklrsfl frkssrdsan klskklsavg iveelfeegs amlaerlgid
      361 egagqttsgl ftcgvcqvdl apsegisvha gsifstsskp wqgpflcaac rnkkdamegk
      421 rpsgvkva
//
LOCUS       XP_016692629             428 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 15 [Gossypium hirsutum].
ACCESSION   XP_016692629
VERSION     XP_016692629.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..428
                     /product="probable protein phosphatase 2C 15"
                     /calculated_mol_wt=45545
     Region          44..297
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(46..47,73..75,249,288)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..428
                     /gene="LOC107909558"
                     /coded_by="XM_016837140.2:397..1683"
                     /db_xref="GeneID:107909558"
ORIGIN      
        1 masgagrrrg helvplaali sremknekme kpsvrcghaa qsrkgedyfl vktdcqrvpg
       61 npsstfsvfa ifdghngnaa aiftrehlls hilsavprgl greewfqalp ralvagfvkt
      121 dkefqsrget sgttatfviv dawtvtvasv gdsrcildtq gggistltvd hrleenveer
      181 ervtasggev grlsiaggae igplrcwpgg lclsrsigdm dvgefivpip yvkqvklsna
      241 ggrliiasdg iwdalssema akscrglpae laarqvvkea lrtrglkddt tcivvdiipp
      301 esspppsplp kkpnklrsfl frkssrdsan klskklsavg iveelfeegs amlaerlgid
      361 egagqttsgl ftcgvcqvdl apsegisvha gsifstsskp wqgpflcaac rnkkdamegk
      421 rpsgvkva
//
LOCUS       XP_016692627             676 aa            linear   PLN 06-AUG-2024
DEFINITION  probable leucine-rich repeat receptor-like protein kinase At1g68400
            [Gossypium hirsutum].
ACCESSION   XP_016692627
VERSION     XP_016692627.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837138.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692627.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..676
                     /product="probable leucine-rich repeat receptor-like
                     protein kinase At1g68400"
                     /calculated_mol_wt=73632
     Region          25..62
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <87..641
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          369..643
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(369..373,377,389,391,420,436..439,443,445,491,493,
                     495..496,498,509,512,525..527)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(369..373,377,389,391,420,436..439,443,491,493,
                     495..496,498,509)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(373,443,445,491,493,495,512,525..527)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     CDS             1..676
                     /gene="LOC107909557"
                     /coded_by="XM_016837138.2:243..2273"
                     /db_xref="GeneID:107909557"
ORIGIN      
        1 maklsslfph fllsflffsl vlaipnpdlk plmdfksaag ksnkltswns tthvctwsgv
       61 tcfrnrisrl vlenlgltgs fqplasltql rvlslkqnhl lgpvpdlsnl talkllflsh
      121 nqftgefpas vtslfrlyrl dlsfnnftgg ipvtinrlth lltlrleenr fsgpvsglnl
      181 pnlqdlnisa nrlsgeipes lssfpmaafg sntalcgapl ekckstgsdp tkpgsdgala
      241 splmpgrnpt viasspsslp asgnpnrtpn sqrrhnagki splaliaiil gdvlvlalvs
      301 lllycyfwrn yvakmrdgkg skvlegekiv yssspypaqp gfergrmvff egvrrfeled
      361 llrasaemlg kggfgtayka vlddgnvlav krlkdanvgg krefeqqmev lgrlrhpnlv
      421 slkayyfare ekllvydymp ngslfwllhg nrgpgrtpld wttrlkvaag aarglafihy
      481 tckalklthg nikstnvlld ksgdarvsdf gltifasptn naprsngyra pelssdgrkp
      541 tqksdvysfg vllleiltgk cpsvvdngga avygyggpld lprwvqsvvr eewtaevfdl
      601 elmrykdiee emvgllqiam actsaspdqr pkishvvkmi deirgvevsp shdqaldsvs
      661 dspclsedtc ggavsq
//
LOCUS       XP_016692626             869 aa            linear   PLN 06-AUG-2024
DEFINITION  vacuolar-sorting protein BRO1 [Gossypium hirsutum].
ACCESSION   XP_016692626
VERSION     XP_016692626.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837137.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692626.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..869
                     /product="vacuolar-sorting protein BRO1"
                     /calculated_mol_wt=97696
     Region          15..370
                     /region_name="BRO1_Alix_like_1"
                     /note="Protein-interacting, N-terminal, Bro1-like domain
                     of an Uncharacterized family of the BRO1_Alix_like
                     superfamily; cd09246"
                     /db_xref="CDD:185769"
     Site            order(137,140,153,156..157,207,210..211,220,223..224,351,
                     353,355,357)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185769"
     Region          376..712
                     /region_name="V_Alix_like_1"
                     /note="Protein-interacting V-domain of an uncharacterized
                     family of the V_Alix_like superfamily; cd09238"
                     /db_xref="CDD:185751"
     Site            order(457,515,519,522..523,683,686..687,690,693)
                     /site_type="other"
                     /note="putative YPXnL-motif binding site"
                     /db_xref="CDD:185751"
     Region          <724..869
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     CDS             1..869
                     /gene="LOC107909556"
                     /coded_by="XM_016837137.2:261..2870"
                     /db_xref="GeneID:107909556"
ORIGIN      
        1 maaassssat vtnimlaiye kktnsidlyr plrqyicfty sereavnled dlstvktlrs
       61 diervpdpap ttrrdllisy fkalclietr fpispdrdhi nsiqftwfda fkqkqkavqq
      121 nihlekaail fnlgavysqi glsydratve grrqashafi aaagsfaflr dnastkasmg
      181 nsttvdlsve cagmlerlml aqaqecvfen tiakgstpgv cakisrqvgl yyeealatln
      241 aaplkdhfek awiahvqlka alfyaeacyr yglelhekee iaeeiarlrs gvstlteakk
      301 sskgapaqll daisklevyl nrnleramke ndrvylmrvp spsslpplpa fsmvksmqmn
      361 dvldaskekm faslvpdssa kalsrytemv ddvirtqaek lqqgseltrv rlkemdlpds
      421 ilalegnfsl pedlknevek vqasggpagl eaelqqlrdl rrvnqellvq teellqkeaa
      481 edaqfrsqfg trwtrpqsst ltktlqerln kfaanlkqag esdvriersv rehsslmsil
      541 nhrpieaalp slsrpimsld anedaivgal kqslrqletl gaqragledm lkemkrkddi
      601 lpklmtstgs yedlfrkeia kydhiceeia qnieaqeqll mqiqvqneef gavfnledyk
      661 asrekcykqi qaalakckei kenineglkf yvtlqdainn ikqqcsdfvm trniqcremm
      721 edvqrqmagf nfqdrestgp ypsvgqprqi prsstqqlte sqsishpspq tpyyrppeqp
      781 mhgyghpppp ytapqqpspy hvppstgapy ppphaqqhap vgheygqpay pgwrgpyyna
      841 paeqsgshpr ppytipnpyh phqsgyykq
//
LOCUS       XP_016690639             156 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690639
VERSION     XP_016690639.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835150.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..156
                     /product="uncharacterized protein"
                     /calculated_mol_wt=17082
     CDS             1..156
                     /gene="LOC107907837"
                     /coded_by="XM_016835150.2:486..956"
                     /db_xref="GeneID:107907837"
ORIGIN      
        1 mttlqkfkll atqcgvtqsp trsprtspll nfrrpkttlr mlltrsgsrk ssscremvyp
       61 qsffgisgek kkgdkdlsgr tlkdlfvssg geyeedqgkv vkekfggkge vevatklggv
      121 nglggeagsa ragwigfrhr mvlrkawrpm lqtipe
//
LOCUS       XP_016690638             675 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: LEAF RUST 10 DISEASE-RESISTANCEUS
            RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Gossypium hirsutum].
ACCESSION   XP_016690638
VERSION     XP_016690638.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835149.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690638.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..675
                     /product="LOW QUALITY PROTEIN: LEAF RUST 10
                     DISEASE-RESISTANCEUS RECEPTOR-LIKE PROTEIN KINASE-like
                     1.1"
                     /calculated_mol_wt=75498
     Region          59..121
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          182..267
                     /region_name="WAK_assoc"
                     /note="Wall-associated receptor kinase C-terminal;
                     pfam14380"
                     /db_xref="CDD:464161"
     Region          340..609
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(340..344,348,360,362,391,408..411,415,417,458,460,
                     462..463,465,476,479,496..499)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(340..344,348,360,362,391,408..411,415,458,460,
                     462..463,465,476)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(344,415,417,458,460,462,479,496..499)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(475..482,492..499)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..675
                     /gene="LOC107907836"
                     /coded_by="XM_016835149.2:169..2196"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:107907836"
ORIGIN      
        1 mliffppssh fpvsqmnqir sihlaspllp alnlvlfsfi flpttafavd esfticrvpr
       61 ycgklnikfp ffiqgrddpr cgypgfeihc rnntksilsl gddnysidni fytnqsvlvs
      121 ravrfetdsi cnhkirnisl ptdryqlppe itkivflfnc nltsipklsp hkigcpaene
      181 tnstlalfns dpqlkfasen ckervvtpvg fdqgeelhve gplnisllnr gfvlnltvsn
      241 cticensggk cgfdystrhf kcfcpdrpha whcthgtntl glklglgigg svtvtvmili
      301 lcifvvrrrp assnflrgks psxislqhlt skttllsafl gdggfgtvyf gklrdgreva
      361 ikrlyqhnyr rleqfmneve iltrlrhknl vslygctsrr srelilvyef vpngtvadhl
      421 hgdhaqsglp awpvrmsiai etatalaylh asdiihrdvk tnnilldenf svkvadfgls
      481 rlfpndvthi stapqgtpgy vdpeyhqcyq lteksdvysf gvvlieliss mpavdinrhr
      541 heinlanlai skiqkcafde lvdpnlgyks ceqvarmttl vaelafrclq qekelrpsme
      601 evleelqrik seayesenvq qeehsdsevp msvgqppspp igdqivllkn ihlppspvsv
      661 adkwisqrtt pnsse
//
LOCUS       XP_040944916              98 aa            linear   PLN 06-AUG-2024
DEFINITION  D-lactate dehydrogenase [cytochrome], mitochondrial-like, partial
            [Gossypium hirsutum].
ACCESSION   XP_040944916
VERSION     XP_040944916.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088982.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         <1..98
                     /product="D-lactate dehydrogenase [cytochrome],
                     mitochondrial-like"
     Region          <5..>97
                     /region_name="PLN02805"
                     /note="D-lactate dehydrogenase [cytochrome]"
                     /db_xref="CDD:178402"
     CDS             1..98
                     /gene="LOC121214770"
                     /coded_by="XM_041088982.1:<1..297"
                     /db_xref="GeneID:121214770"
ORIGIN      
        1 lffyacnqvp ivpyggatsi eghilspngg vcidmtlmkr vkalhirdmd vvvepgigwm
       61 elneylepyg llfpldpgpg atiggmcatc csgslamm
//
LOCUS       XP_016692624             192 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692624
VERSION     XP_016692624.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837135.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692624.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..192
                     /product="uncharacterized protein"
                     /calculated_mol_wt=20594
     Region          59..155
                     /region_name="DUF1218"
                     /note="Protein of unknown function (DUF1218); pfam06749"
                     /db_xref="CDD:462000"
     CDS             1..192
                     /gene="LOC107909553"
                     /coded_by="XM_016837135.2:122..700"
                     /db_xref="GeneID:107909553"
ORIGIN      
        1 maisvpilai ifalhliafv favgaerrrs faevvpdqyd ertyclystd astvyglsaf
       61 gllllsqvvv ngvtrclcfg kglvsatsst tcaifffvfs wlsflgaeac llagsaknay
      121 htkyrgifgg ediscatlrk gvfaagaalt llslvgsvfy ywahsradtg gwqkhrnegv
      181 gmteqppefg kv
//
LOCUS       XP_040944917             385 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944917
VERSION     XP_040944917.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088983.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..385
                     /product="uncharacterized protein isoform X1"
                     /calculated_mol_wt=42267
     Region          8..>103
                     /region_name="CinA"
                     /note="Competence-damaged protein; cl46549"
                     /db_xref="CDD:480889"
     Region          220..381
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
     Site            order(226..229,375..378)
                     /site_type="active"
                     /db_xref="CDD:185680"
     Site            order(226,229,376)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:185680"
     Site            226..229
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:185680"
     Site            375..378
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:185680"
     CDS             1..385
                     /gene="LOC107909552"
                     /coded_by="XM_041088983.1:94..1251"
                     /db_xref="GeneID:107909552"
ORIGIN      
        1 mtdaciravv esihssptqa vlylsggasl qalgllmsvp gasntvleav vpysrmsmiq
       61 llakipakyc sqqtademal laynralkls spgspvlgvg ftgslattrp kqgdhrfhls
      121 trtsdrhwas tvtlskglrs rdqeekvssy fllkaianac kvsstfdsel tesdvvadec
      181 erffdedkel eqlingqicf kvypfssdks ngdrkiiipg sfnplhdghl klleaatsic
      241 gdgypcfels ainadkppls ipqikervmq fekfgktiii snqpyfykka elfpgsafvi
      301 gadtavrlin pkyydgsydr mietlsgckr tgctfivagr kvdgtfkvle dfdvpevlkd
      361 mfvpipaerf rmdissteir rscgl
//
LOCUS       XP_040944918             384 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944918
VERSION     XP_040944918.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088984.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..384
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=42139
     Region          8..>102
                     /region_name="CinA"
                     /note="Competence-damaged protein; cl46549"
                     /db_xref="CDD:480889"
     Region          219..380
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
     Site            order(225..228,374..377)
                     /site_type="active"
                     /db_xref="CDD:185680"
     Site            order(225,228,375)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:185680"
     Site            225..228
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:185680"
     Site            374..377
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:185680"
     CDS             1..384
                     /gene="LOC107909552"
                     /coded_by="XM_041088984.1:88..1242"
                     /db_xref="GeneID:107909552"
ORIGIN      
        1 mtdaciravv esihssptqa vlylsggasl algllmsvpg asntvleavv pysrmsmiql
       61 lakipakycs qqtademall aynralklss pgspvlgvgf tgslattrpk qgdhrfhlst
      121 rtsdrhwast vtlskglrsr dqeekvssyf llkaianack vsstfdselt esdvvadece
      181 rffdedkele qlingqicfk vypfssdksn gdrkiiipgs fnplhdghlk lleaatsicg
      241 dgypcfelsa inadkpplsi pqikervmqf ekfgktiiis nqpyfykkae lfpgsafvig
      301 adtavrlinp kyydgsydrm ietlsgckrt gctfivagrk vdgtfkvled fdvpevlkdm
      361 fvpipaerfr mdissteirr scgl
//
LOCUS       XP_040944919             308 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944919
VERSION     XP_040944919.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088985.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="uncharacterized protein isoform X3"
                     /calculated_mol_wt=34200
     Region          143..304
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
     Site            order(149..152,298..301)
                     /site_type="active"
                     /db_xref="CDD:173912"
     Site            order(149,152,299)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:173912"
     Site            149..152
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:173912"
     Site            298..301
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:173912"
     CDS             1..308
                     /gene="LOC107909552"
                     /coded_by="XM_041088985.1:153..1079"
                     /db_xref="GeneID:107909552"
ORIGIN      
        1 mallaynral klsspgspvl gvgftgslat trpkqgdhrf hlstrtsdrh wastvtlskg
       61 lrsrdqeekv ssyfllkaia nackvsstfd seltesdvva decerffded keleqlingq
      121 icfkvypfss dksngdrkii ipgsfnplhd ghlklleaat sicgdgypcf elsainadkp
      181 plsipqiker vmqfekfgkt iiisnqpyfy kkaelfpgsa fvigadtavr linpkyydgs
      241 ydrmietlsg ckrtgctfiv agrkvdgtfk vledfdvpev lkdmfvpipa erfrmdisst
      301 eirrscgl
//
LOCUS       XP_040944920             296 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944920
VERSION     XP_040944920.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088986.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..296
                     /product="uncharacterized protein isoform X4"
                     /calculated_mol_wt=33092
     Region          131..292
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
     Site            order(137..140,286..289)
                     /site_type="active"
                     /db_xref="CDD:173912"
     Site            order(137,140,287)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:173912"
     Site            137..140
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:173912"
     Site            286..289
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:173912"
     CDS             1..296
                     /gene="LOC107909552"
                     /coded_by="XM_041088986.1:133..1023"
                     /db_xref="GeneID:107909552"
ORIGIN      
        1 mkyrspvlgv gftgslattr pkqgdhrfhl strtsdrhwa stvtlskglr srdqeekvss
       61 yfllkaiana ckvsstfdse ltesdvvade cerffdedke leqlingqic fkvypfssdk
      121 sngdrkiiip gsfnplhdgh lklleaatsi cgdgypcfel sainadkppl sipqikervm
      181 qfekfgktii isnqpyfykk aelfpgsafv igadtavrli npkyydgsyd rmietlsgck
      241 rtgctfivag rkvdgtfkvl edfdvpevlk dmfvpipaer frmdisstei rrscgl
//
LOCUS       XP_016692621             717 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor protein kinase-like protein ZAR1 [Gossypium hirsutum].
ACCESSION   XP_016692621
VERSION     XP_016692621.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837132.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692621.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..717
                     /product="receptor protein kinase-like protein ZAR1"
                     /calculated_mol_wt=78417
     Region          21..61
                     /region_name="LRRNT_2"
                     /note="Leucine rich repeat N-terminal domain; pfam08263"
                     /db_xref="CDD:462411"
     Region          <76..706
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          90..106
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          236..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..708
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(412..416,420,432,434,463,479..482,486,488,534,536,
                     538..539,541,552,555,595..598)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(412..416,420,432,434,463,479..482,486,534,536,
                     538..539,541,552)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(416,486,488,534,536,538,555,595..598)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(551..558,591..598)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..717
                     /gene="LOC107909551"
                     /coded_by="XM_016837132.2:396..2549"
                     /db_xref="GeneID:107909551"
ORIGIN      
        1 mlswvlvvlv vlnfhddvtc lnnqgyalis fkqsiyedpe gslsnwnssd dnpcswngvt
       61 ckeqrvvsvs ipkkklygfl psslgflsdl rhvnlrnnkf fgtlpvelle aqglqslvly
      121 gnslsgslpk digklkylqt lalsdnffng slpssivqck rlktldlsrn nftgslpdgf
      181 gtglvslekl dlsfnkfigs ipsdlgnlss lqgtvdlshn lfagpipasl gnlpekvyid
      241 ltfnnlsgpi pqngalmnrg ptaflgnpgl cgpplrnpcs pdtpgansps sypflpsnsp
      301 pgrsddnegk yergrglskg aviaiivsdi igiclvgllf sfcysricpc skdkddhgyg
      361 fekgrkgkec fcfrkdeset lsenveqydl vpldtqvafd ldellkasaf vlgksgigiv
      421 ykvvledgls lavrrlgegg sqrfkefqte veaigklrhp nivtlrayyw svdeklliyd
      481 ympngslata lhgkagmasf tplswsvrlk iikcvakglv ylhefspkky vhgdlkpsni
      541 lldqnmeahi sdfglgrlan iaggspttqs nrilsdkple rlqksassea aplysnlgsf
      601 yqapealkvv kpsqkwdvys ygvillemit grspvvhvgt semdlvnwiq lcieekkpls
      661 dvldpylapd adkeeeiiav lkitmacvhs sperrptmrh vldaldrlvl stdqntn
//
LOCUS       XP_016692620             370 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger CCCH domain-containing protein 15 [Gossypium hirsutum].
ACCESSION   XP_016692620
VERSION     XP_016692620.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837131.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692620.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..370
                     /product="zinc finger CCCH domain-containing protein 15"
                     /calculated_mol_wt=41496
     Region          51..83
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Region          <215..>280
                     /region_name="CTH1"
                     /note="CCCH-type Zn-finger protein [General function
                     prediction only]; COG5063"
                     /db_xref="CDD:227395"
     CDS             1..370
                     /gene="LOC107909550"
                     /coded_by="XM_016837131.2:261..1373"
                     /db_xref="GeneID:107909550"
ORIGIN      
        1 mqndnvstay gdlaagklnh yqnggvysss tanssaslla lhhprllmqq hqdminrhsl
       61 clsrfreaak eaeslrqent slrsvnsdln kqlnalfqas vqdhfassdy nttpfdlvna
      121 leelcfgggg gvgegevsdm egevdvervk lpksisirsn gyqkmmskag aashrgktrg
      181 lartsnasqq igrakvyvqg gkeeeellel evynqgmlkt elcnkwqetg acpygdhcqf
      241 ahsveelrpv irhpryktev crmvltgyvc syghrchfrh alteqeksig hlnpqtryde
      301 hilnfeigii kskkklrkme isrgfvfpdg gryvevirdi ryalfflllf tmfvssssms
      361 tcgyrdvwca
//
LOCUS       XP_016692619             145 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692619
VERSION     XP_016692619.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837130.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..145
                     /product="uncharacterized protein"
                     /calculated_mol_wt=15608
     CDS             1..145
                     /gene="LOC107909549"
                     /coded_by="XM_016837130.2:509..946"
                     /db_xref="GeneID:107909549"
ORIGIN      
        1 mevfgdgwvg ktlpssfpsi vfviiyamkl ilpappipni saaslcplcl sankylglse
       61 nkkeeegkge sgvgsnrygg ygqvcvflrh nssqhlpyps fptvaplpyp fsemspsisr
      121 svilgvyyfv avfskkstai dafhk
//
LOCUS       XP_016692617             339 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692617
VERSION     XP_016692617.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837128.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692617.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..339
                     /product="uncharacterized protein"
                     /calculated_mol_wt=37834
     Region          36..98
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     CDS             1..339
                     /gene="LOC107909548"
                     /coded_by="XM_016837128.2:73..1092"
                     /db_xref="GeneID:107909548"
ORIGIN      
        1 mrieasaaft ssrplfplfi flffipgfha rnlqqcsssc gdltnisypf rlqgdpagcg
       61 dvdfqlscqn ntailnfrgg kyyvkgisyd krtirvvdvn lahgtcglpy kslsmseate
      121 dgrfpslitf wqanfvncsn tipeltdskv pclngdtshv yvnfsnrnlf gyeiprnckv
      181 isriptssen emnypynett lkllatgfdl rwsvecrnch tfglscvyes nndprifqce
      241 tmyeedyktl ltaaiaylvs cslidkallv rfilaplvvf vfllhkcltt rkkvgnaehv
      301 gdlqmlpkpi pcspqghtrn lssdspkqvl iaasiersa
//
LOCUS       XP_016692616             588 aa            linear   PLN 06-AUG-2024
DEFINITION  glucose-6-phosphate 1-dehydrogenase, chloroplastic [Gossypium
            hirsutum].
ACCESSION   XP_016692616
VERSION     XP_016692616.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837127.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692616.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..588
                     /product="glucose-6-phosphate 1-dehydrogenase,
                     chloroplastic"
                     /calculated_mol_wt=66734
     Region          1..588
                     /region_name="PLN02333"
                     /note="glucose-6-phosphate 1-dehydrogenase"
                     /db_xref="CDD:215191"
     CDS             1..588
                     /gene="LOC107909547"
                     /coded_by="XM_016837127.2:261..2027"
                     /db_xref="GeneID:107909547"
ORIGIN      
        1 maafsathcr sysyshsssi nggqnqrfsf ssfsrlsvpa kairnshqtv vlmqdgvvat
       61 kvtpveketp keklkdells vtstkewdek agfdsnenes tvsitvvgas gdlakkkifp
      121 alfalyyedc lpkhftiygy arskmtdael rnmvsktltc ridkrencse kmdqflkrcf
      181 yhsgqydsee nfaqldkklk rheggrvsnh lfylsippni fveavkcass sassgngwtr
      241 vivekpfgrd sessavltks lkqyltedqi fridhylgke lvenlsvlrf anlifeplwt
      301 rqyirnvqii fsedfgtegr ggyfdnygii rdimqnhllq ilalfametp vsldaedirn
      361 ekvkvlrsmr plrledvvig qykshskggv typsytddkt vpkdsltptf aaaalfidna
      421 rwdgvpflmk agkalhnkga eirvqfrhvp gnlynrnfgt dldratnefv irvqpdeaif
      481 lkinnkvpgl gmrldrsnln lhyaaryske ipdayerlll daiegerrlf irsdeldaaw
      541 alftpvlkel eekkiipesy pygsrgpvsa hylaarysvr wgdldieq
//
LOCUS       XP_016692613             736 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g22960,
            mitochondrial [Gossypium hirsutum].
ACCESSION   XP_016692613
VERSION     XP_016692613.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837124.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692613.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..736
                     /product="pentatricopeptide repeat-containing protein
                     At1g22960, mitochondrial"
                     /calculated_mol_wt=84184
     Region          <187..>488
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          215..241
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          249..274
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          279..308
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          314..343
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          351..378
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <359..>724
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          386..413
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          419..448
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          454..483
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          489..518
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          526..553
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          561..588
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          594..623
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          629..658
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          664..693
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..736
                     /gene="LOC107909545"
                     /coded_by="XM_016837124.2:627..2837"
                     /db_xref="GeneID:107909545"
ORIGIN      
        1 mtlcikrask slatiaplsl tckvrflfps sfsllhslps pssppepdss sssssssdet
       61 hykqlifnti dekpwafcnn kwvsnkfhai ivdphlfikv lnlmrerpri alrffrwvem
      121 qpgvkrselv fsvmldilve nnllrsaywv mervitfhmh givdvlicgy lkfevsvkll
      181 dllllvcskk lmvdhclwif dkmvrtgllp dvkncnrilt mlrdkslvak asqvyrmmke
      241 fgikptivty ntmldsfcke gevqqaiell wemrcfpndv tynvlinglt knckleqaeg
      301 liremlklgi kvsaytynpl icgyfkkgll vealnlgeqm vsngvvhtva tyntfmyglc
      361 rwgrlddarq qfndmlkrnm ipdivsyntl iyrycrigni seafllfnel rcrrlvptvv
      421 tynalidglc rvgdldlary lkdtmitqgi fpdvytytil vngsyklgnl saardlfdem
      481 lhnglepdgf tyatqvvgel khgdparafs meeqmvakel ppdliiynvf vlwhsklrdf
      541 keacnllhkm isiglipdhv tyttiihayl enghlrkare mfhemlskgl spsvvtytil
      601 vhghaakgfl slafmyfsem qekgvqpnvi tynaminglc kvrrigqayk ffaemeakgi
      661 lpnkysytil inencdvgnw eeslrlyqem ldreilpdsc thnallkqln ndcnlnavrq
      721 letlilecke scgaet
//
LOCUS       XP_016692614             340 aa            linear   PLN 06-AUG-2024
DEFINITION  4-sulfomuconolactone hydrolase [Gossypium hirsutum].
ACCESSION   XP_016692614
VERSION     XP_016692614.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837125.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..340
                     /product="4-sulfomuconolactone hydrolase"
                     /calculated_mol_wt=37398
     Region          57..335
                     /region_name="COG3618"
                     /note="Predicted metal-dependent hydrolase, TIM-barrel
                     fold [General function prediction only]"
                     /db_xref="CDD:442836"
     CDS             1..340
                     /gene="LOC107909546"
                     /coded_by="XM_016837125.2:46..1068"
                     /db_xref="GeneID:107909546"
ORIGIN      
        1 malpvrsvis gsiflgncch arlysfaaps vpyrrtqyka sttkmasana qgrpktidsh
       61 lhiwasplea adkypyfpgq eptlpghldf llqcmeeasv egalivqpin hkfdhslvts
      121 vlkkhptkfv gcclanpaen gtgvkqledl ilkdgyravr fnpylwpsgq qmtnevgkam
      181 fsragelgvp vgfmcmkgln lhiseitelc aefpstavll dhlafckppl ndeeklafse
      241 llklsrfpqv yvkfsalfrv srmsspyldl vpllaevvsn fganrvmwgs dfpyvvpesg
      301 ykgakeaacl iasqaslsss evewimgktv mqlfqgqwlp
//
LOCUS       XP_040944922             468 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 12 [Gossypium hirsutum].
ACCESSION   XP_040944922
VERSION     XP_040944922.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088988.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..468
                     /product="protein DETOXIFICATION 12"
                     /calculated_mol_wt=51088
     Region          22..458
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(261,265,293,296,375,379,406,432,436)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..468
                     /gene="LOC107909544"
                     /coded_by="XM_041088988.1:431..1837"
                     /db_xref="GeneID:107909544"
ORIGIN      
        1 meeslipkld nrwltwaafv eetkrvgyla gpmvvvtlsq yllqvistmm vghlgvlpla
       61 ssaiaislat vtgfslllgm acaletlcgq aygaqqyrkf gihtytaifc lilvciplsv
      121 lwlnmgrllv figqdplish eagnfiswli palfgyatfq pliryfqtqs litpmlicsc
      181 aslivhiplc wflvfksgse siggalaisi snwlnaifls lymwysptct ktrvpittel
      241 fqgfgeffhf aipsavmvcl ewwsfellim lsgflpnpkl etsvlsvcln tittlyaiph
      301 gigaaastrv snelgagkpq aahvavyaam afavletliv tgtlftsrhv fgyvysneke
      361 vvdyvttmap lvcvsvilds lqgvlsgiar gcgwqhigay vnlaafylvg ipvaatlafw
      421 lhlrgiglwi giqfgaftqt illaivtsci nwekqaskar erlfqglq
//
LOCUS       XP_016692608             490 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 12 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692608
VERSION     XP_016692608.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837119.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..490
                     /product="protein DETOXIFICATION 12 isoform X1"
                     /calculated_mol_wt=53391
     Region          36..473
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(276,280,308,311,390,394,421,447,451)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..490
                     /gene="LOC107909543"
                     /coded_by="XM_016837119.2:498..1970"
                     /db_xref="GeneID:107909543"
ORIGIN      
        1 mvdslkknim eeslipklen eekstrwlsw aafveeikra gylagpmvav tlsqyllqvi
       61 stmmvghlge lalsssaiai slagvtgfsf llgmacalet lcgqaygaqq yrklgihtyt
      121 aifclilvci plsvlwlymg rllvfigqdp yisqeagkfi lwlipslfay atfqplvryf
      181 qtqslitpml icscaslvvh iplcwalvfk sglesiggai aisisnwlnv iflalymrys
      241 ptctktrapi tmellqgire ffrfaipsav micslewwsy ellillsgll pnpeletsvl
      301 svclntistl yaipyglgaa astrvsnelg agkpqaarva vyaamaiavl etlivtgalf
      361 asrrvfgyiy snekevvdyv ttmaplvcvs vvldslqgvl sgiargcgwq higayvnlga
      421 fylvgipvaa tlafwlqlrg vglwigiqsg aftqtillai vtscinwekq aikarervfq
      481 gsssieygtm
//
LOCUS       XP_016692609             489 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 12 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692609
VERSION     XP_016692609.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837120.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..489
                     /product="protein DETOXIFICATION 12 isoform X2"
                     /calculated_mol_wt=53304
     Region          36..472
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(275,279,307,310,389,393,420,446,450)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..489
                     /gene="LOC107909543"
                     /coded_by="XM_016837120.2:361..1830"
                     /db_xref="GeneID:107909543"
ORIGIN      
        1 mvdslkknim eeslipklen eekstrwlsw aafveeikra gylagpmvav tlsqyllqvi
       61 stmmvghlge lalsssaiai slagvtgfsf llgmacalet lcgqaygaqq yrklgihtyt
      121 aifclilvci plsvlwlymg rllvfigqdp yisqeagkfi lwlipslfay atfqplvryf
      181 qtqslitpml icscaslvvh iplcwalvfk sglesiggai aisisnwlnv iflalymrys
      241 ptctktrapi tmellqgire ffrfaipsav miclewwsye llillsgllp npeletsvls
      301 vclntistly aipyglgaaa strvsnelga gkpqaarvav yaamaiavle tlivtgalfa
      361 srrvfgyiys nekevvdyvt tmaplvcvsv vldslqgvls giargcgwqh igayvnlgaf
      421 ylvgipvaat lafwlqlrgv glwigiqsga ftqtillaiv tscinwekqa ikarervfqg
      481 sssieygtm
//
LOCUS       XP_016692606             489 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 12 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692606
VERSION     XP_016692606.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837117.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692606.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..489
                     /product="protein DETOXIFICATION 12 isoform X1"
                     /calculated_mol_wt=53153
     Region          36..472
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(275,279,307,310,389,393,420,446,450)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..489
                     /gene="LOC107909541"
                     /coded_by="XM_016837117.2:187..1656"
                     /db_xref="GeneID:107909541"
ORIGIN      
        1 mvdslkknsm eenlipklen eeksnrrlsw aalveeikrv gylagpmvav tlsqyllqvi
       61 stmmvghlge lalsssaiai slagvtgfsl llgmacalet lcgqaygaqq yrklgihtyt
      121 aisclilvci plsvlwlymg rllvflgqdp lisqeagkfi lwlipalfay atfqplvryf
      181 qtqslitpml icscaslvvh iplcwalvfk sgleniggal aisisnwlna iflalymwys
      241 ptctktrapv tmelfqgire ffrfaipsav miclewwsfe llillsgllp npeletsvls
      301 vclntiatly aipyglgaaa strvsnelga gkpqaarvav yaaltitvle tlivsgslfa
      361 srrvfgyvys nekevvdyvt tmaplvcvsv ildslqgvls giargcgwqh igayvnlgaf
      421 ylvgipvaai lafwlqlkgv glwigvqsga ftqtillaiv tscinwenqa ikarerlfqg
      481 sssieygtm
//
LOCUS       XP_016692607             396 aa            linear   PLN 06-AUG-2024
DEFINITION  protein DETOXIFICATION 12 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692607
VERSION     XP_016692607.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837118.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692607.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="protein DETOXIFICATION 12 isoform X2"
                     /calculated_mol_wt=43137
     Region          1..379
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(182,186,214,217,296,300,327,353,357)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..396
                     /gene="LOC107909541"
                     /coded_by="XM_016837118.2:207..1397"
                     /db_xref="GeneID:107909541"
ORIGIN      
        1 macaletlcg qaygaqqyrk lgihtytais clilvcipls vlwlymgrll vflgqdplis
       61 qeagkfilwl ipalfayatf qplvryfqtq slitpmlics caslvvhipl cwalvfksgl
      121 eniggalais isnwlnaifl alymwysptc tktrapvtme lfqgireffr faipsavmic
      181 lewwsfelli llsgllpnpe letsvlsvcl ntiatlyaip yglgaaastr vsnelgagkp
      241 qaarvavyaa ltitvletli vsgslfasrr vfgyvysnek evvdyvttma plvcvsvild
      301 slqgvlsgia rgcgwqhiga yvnlgafylv gipvaailaf wlqlkgvglw igvqsgaftq
      361 tillaivtsc inwenqaika rerlfqgsss ieygtm
//
LOCUS       XP_016692602            1215 aa            linear   PLN 06-AUG-2024
DEFINITION  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016692602
VERSION     XP_016692602.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837113.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692602.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1215
                     /product="DExH-box ATP-dependent RNA helicase DExH5,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=136749
     Region          316..>920
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          939..1021
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     Region          1128..1190
                     /region_name="dsrm"
                     /note="Double-stranded RNA binding motif; pfam00035"
                     /db_xref="CDD:425434"
     Site            order(1133..1134,1136,1156,1174..1176,1179)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     CDS             1..1215
                     /gene="LOC107909540"
                     /coded_by="XM_016837113.2:57..3704"
                     /db_xref="GeneID:107909540"
ORIGIN      
        1 mppsysphfl pfssqfltht ikpslfsptm kdrppssyga vyvpphhrli sspnnqdatk
       61 nssapgihsk lrdhqntpil nakgtaspps lphlqqqqrq qqqgtynnnn gsknsnnqna
      121 qynsayclgi senvsdrqle lslqsgtfde anieewkrkl amllhddgkq efvsrekkdr
      181 rdfeqiaala srmglyshly skvavfsklp lpnyrfdldd krpqrevsln fgllkrvnay
      241 lgeylskksr nkesfsdncf srsssnssiv teeglfeqpe plasgtavme killrrssll
      301 rdqqqawqes legremlefr qslpaykekd tiltailqnq vviisgetgc gkttqipqfi
      361 leseidsarg afcsiictqp rrisaisvse rvasergekl gesvgykvrl egikgrdtrl
      421 lfcttgillr rllvdrnlkg vthvivdeih ergmnedfll ivlkdllprr pelklilmsa
      481 tldaelfssy fdgaplihip gftypvrthf lenilemtgy rltpsnqidd ygqermwkms
      541 kqaprkrksq ivssvedalr aadfkdfspq iqeslscwnp dcigfnlvey llsyicener
      601 pgavlvfmtg wddisslkdk lqahpvlgdp srvllltchg smasseqkli feepedgvrk
      661 ivlttniaet sitindvvfv ldcgkakets ydalnntpcl lpswvskvst qqrrgragrv
      721 qpgecyhlyp rcvydaftey qlpeilrtpl qslclqiksl klgsisefls ralqspklla
      781 vqnaieylkv igaldenenl tvlgryltml pvepklgkml ilgailncld pvltivagls
      841 vrdpfltpld kkdlaetakl qfshdhsdhl alvrayegwk eaekdlagyd ycwknflsaq
      901 smkaidslre eflsllkdtg lidgyatscn dwsydqhlir aiicyglypg icsvvhneks
      961 fslktmedgp vllysnsvna resripypwl vfnekikvns vflrdstavs dsvlllfggs
     1021 isrgdvdghl kmlggyleff mqpaiaekyl slrrefdeli qnkllnpqiv lhlhhelisa
     1081 irllvsedqc dgrfvfgrpd lkpsnmpvvp pqrslisrte sgpggdnsks qlqtlvtrag
     1141 yaapiyktsq lennqfqatv efngmqiigq pcnnkksaek daaaealqwl msgtrtghey
     1201 inymsmflkk skrdn
//
LOCUS       XP_016692603            1207 aa            linear   PLN 06-AUG-2024
DEFINITION  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016692603
VERSION     XP_016692603.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837114.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692603.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1207
                     /product="DExH-box ATP-dependent RNA helicase DExH5,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=135817
     Region          316..>912
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          931..1013
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     Region          1120..1182
                     /region_name="dsrm"
                     /note="Double-stranded RNA binding motif; pfam00035"
                     /db_xref="CDD:425434"
     Site            order(1125..1126,1128,1148,1166..1168,1171)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     CDS             1..1207
                     /gene="LOC107909540"
                     /coded_by="XM_016837114.2:58..3681"
                     /db_xref="GeneID:107909540"
ORIGIN      
        1 mppsysphfl pfssqfltht ikpslfsptm kdrppssyga vyvpphhrli sspnnqdatk
       61 nssapgihsk lrdhqntpil nakgtaspps lphlqqqqrq qqqgtynnnn gsknsnnqna
      121 qynsayclgi senvsdrqle lslqsgtfde anieewkrkl amllhddgkq efvsrekkdr
      181 rdfeqiaala srmglyshly skvavfsklp lpnyrfdldd krpqrevsln fgllkrvnay
      241 lgeylskksr nkesfsdncf srsssnssiv teeglfeqpe plasgtavme killrrssll
      301 rdqqqawqes legremlefr qslpaykekd tiltailqnq vviisgetgc gkttqipqfi
      361 leseidsarg afcsiictqp rrisaisvse rvasergekl gesvgykvrl egikgrdtrl
      421 lfcttgillr rllvdrnlkg vthvivdeih ergmnedfll ivlkdllprr pelklilmsa
      481 tldaelfssy fdgaplihip gftypvrthf lenilemtgy rltpsnqidd ygqermwkms
      541 kqaprkrksq ivssvedalr aadfkdfspq iqeslscwnp dcigfnlvey llsyicener
      601 pgavlvfmtg wddisslkdk lqahpvlgdp srvllltchg smasseqkli feepedgvrk
      661 ivlttniaet sitindvvfv ldcgkakets ydalnntpcl lpswvskvst qqrrgragrv
      721 qpgecyhlyp rcvydaftey qlpeilrtpl qslclqiksl klgsisefls ralqspklla
      781 vqnaieylkv igaldenenl tvlvepklgk mlilgailnc ldpvltivag lsvrdpfltp
      841 ldkkdlaeta klqfshdhsd hlalvrayeg wkeaekdlag ydycwknfls aqsmkaidsl
      901 reeflsllkd tglidgyats cndwsydqhl iraiicygly pgicsvvhne ksfslktmed
      961 gpvllysnsv naresripyp wlvfnekikv nsvflrdsta vsdsvlllfg gsisrgdvdg
     1021 hlkmlggyle ffmqpaiaek ylslrrefde liqnkllnpq ivlhlhheli sairllvsed
     1081 qcdgrfvfgr pdlkpsnmpv vppqrslisr tesgpggdns ksqlqtlvtr agyaapiykt
     1141 sqlennqfqa tvefngmqii gqpcnnkksa ekdaaaealq wlmsgtrtgh eyinymsmfl
     1201 kkskrdn
//
LOCUS       XP_016692601             391 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692601
VERSION     XP_016692601.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837112.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692601.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..391
                     /product="uncharacterized protein"
                     /calculated_mol_wt=44850
     Region          <127..>166
                     /region_name="CBD_MYO6-like"
                     /note="calmodulin binding domain found in unconventional
                     myosin-VI and similar proteins; cd21759"
                     /db_xref="CDD:409646"
     Site            134..144
                     /site_type="other"
                     /note="IQ motif"
                     /db_xref="CDD:409640"
     Region          150..225
                     /region_name="BAG"
                     /note="BAG domain; pfam02179"
                     /db_xref="CDD:460475"
     CDS             1..391
                     /gene="LOC107909539"
                     /coded_by="XM_016837112.2:101..1276"
                     /db_xref="GeneID:107909539"
ORIGIN      
        1 mfpqlpdptf fflepwnwil kfpnypyifl fclsvlsthq lqnppvlfps qrvkqesikk
       61 spvysikiri mdfpfaqnpf dasfrpryer sfrgiplqvl peasqpqslk pkmvsipvhf
      121 vgskqgrsds aikiqkvfrg flvrknvkki maireqvndi ersvsktetv elirndpkqr
      181 lkvnenlmsl lfkldsvkgv dscvrdfrks vikkaialqe mvdaiisgnq svdssnnaev
      241 idqnqgiids sdksnqilew eatedaecva nlsesegsft vavggneeki lessgnesqs
      301 nwlgdeegen rrgqsdnngk eilerimeen ekmmrmmetl sernemqtrm lsaltqrveq
      361 lekaflcdkl rrkkwrsdek sqdirkcggk r
//
LOCUS       XP_016692600             172 aa            linear   PLN 06-AUG-2024
DEFINITION  major pollen allergen Ole e 1 [Gossypium hirsutum].
ACCESSION   XP_016692600
VERSION     XP_016692600.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837111.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..172
                     /product="major pollen allergen Ole e 1"
                     /calculated_mol_wt=18849
     Region          34..129
                     /region_name="Pollen_Ole_e_1"
                     /note="Pollen protein Ole e 1 like; pfam01190"
                     /db_xref="CDD:460103"
     CDS             1..172
                     /gene="LOC107909538"
                     /coded_by="XM_016837111.2:197..715"
                     /db_xref="GeneID:107909538"
ORIGIN      
        1 mdtiirllll lassfmhlfs ataqppnpis ritvvgvvfc dscssntfsr hsyflpgvev
       61 nieckfkaqs pktteqmsvs vnrttdkygv ykleiphvdg vdcveglaie slcqaslvgs
      121 kskacdvpgl ktstnqitvk skqdnlciys lnalsyrpsk rnatlcrnhk qw
//
LOCUS       XP_040944923             155 aa            linear   PLN 06-AUG-2024
DEFINITION  GDSL esterase/lipase At1g71691 [Gossypium hirsutum].
ACCESSION   XP_040944923
VERSION     XP_040944923.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088989.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..155
                     /product="GDSL esterase/lipase At1g71691"
                     /calculated_mol_wt=16552
     Region          5..147
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     CDS             1..155
                     /gene="LOC121214775"
                     /coded_by="XM_041088989.1:215..682"
                     /db_xref="GeneID:121214775"
ORIGIN      
        1 mgpatngrtv vdfipqvagl pfpppilrls kaqrkttptg vnhgsassgk qpspppaiki
       61 ftiyklgark flldnnvspl gcvpanihak khntscvedi nqrvaffngl lpnvltklek
      121 iltgstlvgc dlyklfedvc nqpasygalf cygfl
//
LOCUS       XP_016690972             125 aa            linear   PLN 06-AUG-2024
DEFINITION  putative glutaredoxin-C14 [Gossypium hirsutum].
ACCESSION   XP_016690972
VERSION     XP_016690972.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835483.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="putative glutaredoxin-C14"
                     /calculated_mol_wt=13695
     Region          26..125
                     /region_name="GlrX-like_plant"
                     /note="Glutaredoxin-like family; TIGR02189"
                     /db_xref="CDD:274023"
     Site            order(40,43,45,85,87..89,100..103)
                     /site_type="other"
                     /note="GSH binding site [chemical binding]"
                     /db_xref="CDD:239511"
     Site            order(43,46)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239511"
     CDS             1..125
                     /gene="LOC107908246"
                     /coded_by="XM_016835483.2:426..803"
                     /db_xref="GeneID:107908246"
ORIGIN      
        1 mhyqgnyywg yymptrsigs dpmervvkla sekavvifsl ssccmchavk rlfcgmgvnp
       61 tvyeldqdpr gkdletalmr llgnsqpvpv vfiggkliga mdrvmashin gtlvpllkea
      121 galwl
//
LOCUS       XP_016692599             286 aa            linear   PLN 06-AUG-2024
DEFINITION  bidirectional sugar transporter SWEET15 [Gossypium hirsutum].
ACCESSION   XP_016692599
VERSION     XP_016692599.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837110.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..286
                     /product="bidirectional sugar transporter SWEET15"
                     /calculated_mol_wt=31842
     Region          14..97
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     Region          133..219
                     /region_name="MtN3_slv"
                     /note="Sugar efflux transporter for intercellular
                     exchange; pfam03083"
                     /db_xref="CDD:397278"
     CDS             1..286
                     /gene="LOC107909537"
                     /coded_by="XM_016837110.2:121..981"
                     /db_xref="GeneID:107909537"
ORIGIN      
        1 malmadhhsl avafgvlgni isvlvylapl ptfyriykkk stesfqslpy qvalfssmlw
       61 lyyalmkkga fllitinsfg cvvetiyiam yiayatknsr vsaiklfvam nvalfsfiii
      121 lthflvkgsi rvqvlgwicv aisvsvfaap lnivarvirt ksvefmpfnl sffltlsavm
      181 wfayglfmkd lcvalpnvig fvlgmlqmll yaiyrnsekv ieekkipeqm kgvvvfstlg
      241 psevypvgvd iepdvkpked tteneqtgep dkndvkcled ssecpv
//
LOCUS       XP_016692598             386 aa            linear   PLN 06-AUG-2024
DEFINITION  glycerophosphodiester phosphodiesterase GDPD1, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016692598
VERSION     XP_016692598.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837109.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692598.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..386
                     /product="glycerophosphodiester phosphodiesterase GDPD1,
                     chloroplastic"
                     /calculated_mol_wt=43393
     Region          50..330
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(54,92,94,187,226,304)
                     /site_type="active"
                     /db_xref="CDD:176547"
     Site            order(54,107)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176547"
     CDS             1..386
                     /gene="LOC107909535"
                     /coded_by="XM_016837109.2:153..1313"
                     /db_xref="GeneID:107909535"
ORIGIN      
        1 mamalkavhv cdvpnldqvp enaalalcst rfragvndek icecnipkfl vvghrgngmn
       61 mlqspdprmk sikensilsf neaakfsidf iefdvqvtkd dypviyhdnf vlheekgviv
      121 enrvtelala eflsygpqkh pgsegkplyr ktkdgrffew kvekdaplct leeafhdvdq
      181 svgfnvelkf ddfivykeee lsrilkailk vvfenakgrq ilfssfqpda arlirklqst
      241 ypvyfltngg seiytdirrn sleeaiklsl englqgivse vkavfrnpga vgrikeskls
      301 lmtygqlnnv pevaymqhlm gvegvivdlv keisesvsdl thakegeeks mygeedgkke
      361 gkakpqfskd elsfllklip elmiqa
//
LOCUS       XP_016692594             367 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016692594
VERSION     XP_016692594.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837105.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692594.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta-1, mitochondrial"
                     /calculated_mol_wt=39414
     Region          9..362
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..367
                     /gene="LOC107909532"
                     /coded_by="XM_016837105.2:295..1398"
                     /db_xref="GeneID:107909532"
ORIGIN      
        1 mlgivrqkml gqsllkirpa isvlrsyssa akqmtvreal nsaldeemsa dpkvflmgee
       61 vgeyqgayki skgllekygp ervldtpite agfagigvga ayyglkpvve fmtfnfsmqa
      121 idhiinsaak snymsagqms vpivfrgpng aaagvgaqhs qcyaswyasc pglkvlspys
      181 sedargllka airdpdpvvf lenellyges fpvsdevlds sfclpvgkak ierkgkdvti
      241 tafskmvgya lkaaeileke gidaevinlr sirpldrsti nasvrktnrl itveegfpqh
      301 gvgaeicasv veesfaylda pveriagadv pmpyaanler mavpqvediv raakracyra
      361 vplaaaa
//
LOCUS       XP_016692595             367 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016692595
VERSION     XP_016692595.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837106.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692595.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta-1, mitochondrial"
                     /calculated_mol_wt=39414
     Region          9..362
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..367
                     /gene="LOC107909532"
                     /coded_by="XM_016837106.2:199..1302"
                     /db_xref="GeneID:107909532"
ORIGIN      
        1 mlgivrqkml gqsllkirpa isvlrsyssa akqmtvreal nsaldeemsa dpkvflmgee
       61 vgeyqgayki skgllekygp ervldtpite agfagigvga ayyglkpvve fmtfnfsmqa
      121 idhiinsaak snymsagqms vpivfrgpng aaagvgaqhs qcyaswyasc pglkvlspys
      181 sedargllka airdpdpvvf lenellyges fpvsdevlds sfclpvgkak ierkgkdvti
      241 tafskmvgya lkaaeileke gidaevinlr sirpldrsti nasvrktnrl itveegfpqh
      301 gvgaeicasv veesfaylda pveriagadv pmpyaanler mavpqvediv raakracyra
      361 vplaaaa
//
LOCUS       XP_040944924             367 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_040944924
VERSION     XP_040944924.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088990.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta-1, mitochondrial"
                     /calculated_mol_wt=39414
     Region          9..362
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..367
                     /gene="LOC107909532"
                     /coded_by="XM_041088990.1:330..1433"
                     /db_xref="GeneID:107909532"
ORIGIN      
        1 mlgivrqkml gqsllkirpa isvlrsyssa akqmtvreal nsaldeemsa dpkvflmgee
       61 vgeyqgayki skgllekygp ervldtpite agfagigvga ayyglkpvve fmtfnfsmqa
      121 idhiinsaak snymsagqms vpivfrgpng aaagvgaqhs qcyaswyasc pglkvlspys
      181 sedargllka airdpdpvvf lenellyges fpvsdevlds sfclpvgkak ierkgkdvti
      241 tafskmvgya lkaaeileke gidaevinlr sirpldrsti nasvrktnrl itveegfpqh
      301 gvgaeicasv veesfaylda pveriagadv pmpyaanler mavpqvediv raakracyra
      361 vplaaaa
//
LOCUS       XP_040944925             367 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_040944925
VERSION     XP_040944925.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088991.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta-1, mitochondrial"
                     /calculated_mol_wt=39414
     Region          9..362
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..367
                     /gene="LOC107909532"
                     /coded_by="XM_041088991.1:176..1279"
                     /db_xref="GeneID:107909532"
ORIGIN      
        1 mlgivrqkml gqsllkirpa isvlrsyssa akqmtvreal nsaldeemsa dpkvflmgee
       61 vgeyqgayki skgllekygp ervldtpite agfagigvga ayyglkpvve fmtfnfsmqa
      121 idhiinsaak snymsagqms vpivfrgpng aaagvgaqhs qcyaswyasc pglkvlspys
      181 sedargllka airdpdpvvf lenellyges fpvsdevlds sfclpvgkak ierkgkdvti
      241 tafskmvgya lkaaeileke gidaevinlr sirpldrsti nasvrktnrl itveegfpqh
      301 gvgaeicasv veesfaylda pveriagadv pmpyaanler mavpqvediv raakracyra
      361 vplaaaa
//
LOCUS       XP_016692596             367 aa            linear   PLN 06-AUG-2024
DEFINITION  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
            [Gossypium hirsutum].
ACCESSION   XP_016692596
VERSION     XP_016692596.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837107.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692596.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..367
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta-1, mitochondrial"
                     /calculated_mol_wt=39414
     Region          9..362
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..367
                     /gene="LOC107909532"
                     /coded_by="XM_016837107.2:172..1275"
                     /db_xref="GeneID:107909532"
ORIGIN      
        1 mlgivrqkml gqsllkirpa isvlrsyssa akqmtvreal nsaldeemsa dpkvflmgee
       61 vgeyqgayki skgllekygp ervldtpite agfagigvga ayyglkpvve fmtfnfsmqa
      121 idhiinsaak snymsagqms vpivfrgpng aaagvgaqhs qcyaswyasc pglkvlspys
      181 sedargllka airdpdpvvf lenellyges fpvsdevlds sfclpvgkak ierkgkdvti
      241 tafskmvgya lkaaeileke gidaevinlr sirpldrsti nasvrktnrl itveegfpqh
      301 gvgaeicasv veesfaylda pveriagadv pmpyaanler mavpqvediv raakracyra
      361 vplaaaa
//
LOCUS       XP_016692588             640 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g33490 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692588
VERSION     XP_016692588.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837099.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692588.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..640
                     /product="uncharacterized protein At2g33490 isoform X1"
                     /calculated_mol_wt=70839
     Region          41..229
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cd07307"
                     /db_xref="CDD:153271"
     Site            order(41,44..45,49,51..52,55..56,58..59,63,65..66,69..70,
                     72..73,76,96,99..100,191,194..195,197,199,202..203,
                     205..206,212..213,216..217,219..220,223..224,226..227)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          <343..631
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..640
                     /gene="LOC107909529"
                     /coded_by="XM_016837099.2:226..2148"
                     /db_xref="GeneID:107909529"
ORIGIN      
        1 mktslrrlrg lahhkhggea kqrpdvlalp qldelaqasq dmqdmidcye gllyaaaatt
       61 ncayefsdsl remgtcllak talnddeesg kvllmlgkvq fklqklldsy rshisqtiti
      121 psesllnelr tveemkrqcd ekrnvyehma mrykekgrsk grkgdnfsmq qlqvahdeyd
      181 deatlfvfrl kslkqgqsrs lltqaarhha aqlnffrkal ksleeiephv qkvteqqhid
      241 yrfsgleddd gdngddneny enddddyysd dyddeddgel sfdyglddqd qnmvptsrhs
      301 meldqvgltf pqvamlgask enlershrhs fsfrgeirns sqsaplfaen ksepseksqp
      361 lpsrksssyv lptpvatkgs irlgkpapqs yekiwhsspl elhkyqrllr dekisgsavi
      421 naqavlress kpasstqlpp pladkvllsv spaaasdskk skrqafsgpl tskqwpskpv
      481 svehpqlfsg pilrspmsql qaaspkvspn asppfvsspk iselhelprp patstskssr
      541 plglvgysgp lmprgqvlsa tnksavsraa splpqppdvv trsfsipsrd hrvmslpvfk
      601 pletaivsgm sqdvaspplt pislaqiqps stssksvnrn
//
LOCUS       XP_040944926             640 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g33490 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944926
VERSION     XP_040944926.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088992.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..640
                     /product="uncharacterized protein At2g33490 isoform X1"
                     /calculated_mol_wt=70839
     Region          41..229
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cd07307"
                     /db_xref="CDD:153271"
     Site            order(41,44..45,49,51..52,55..56,58..59,63,65..66,69..70,
                     72..73,76,96,99..100,191,194..195,197,199,202..203,
                     205..206,212..213,216..217,219..220,223..224,226..227)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          <343..631
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..640
                     /gene="LOC107909529"
                     /coded_by="XM_041088992.1:1469..3391"
                     /db_xref="GeneID:107909529"
ORIGIN      
        1 mktslrrlrg lahhkhggea kqrpdvlalp qldelaqasq dmqdmidcye gllyaaaatt
       61 ncayefsdsl remgtcllak talnddeesg kvllmlgkvq fklqklldsy rshisqtiti
      121 psesllnelr tveemkrqcd ekrnvyehma mrykekgrsk grkgdnfsmq qlqvahdeyd
      181 deatlfvfrl kslkqgqsrs lltqaarhha aqlnffrkal ksleeiephv qkvteqqhid
      241 yrfsgleddd gdngddneny enddddyysd dyddeddgel sfdyglddqd qnmvptsrhs
      301 meldqvgltf pqvamlgask enlershrhs fsfrgeirns sqsaplfaen ksepseksqp
      361 lpsrksssyv lptpvatkgs irlgkpapqs yekiwhsspl elhkyqrllr dekisgsavi
      421 naqavlress kpasstqlpp pladkvllsv spaaasdskk skrqafsgpl tskqwpskpv
      481 svehpqlfsg pilrspmsql qaaspkvspn asppfvsspk iselhelprp patstskssr
      541 plglvgysgp lmprgqvlsa tnksavsraa splpqppdvv trsfsipsrd hrvmslpvfk
      601 pletaivsgm sqdvaspplt pislaqiqps stssksvnrn
//
LOCUS       XP_040944927             640 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g33490 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944927
VERSION     XP_040944927.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088993.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..640
                     /product="uncharacterized protein At2g33490 isoform X1"
                     /calculated_mol_wt=70839
     Region          41..229
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cd07307"
                     /db_xref="CDD:153271"
     Site            order(41,44..45,49,51..52,55..56,58..59,63,65..66,69..70,
                     72..73,76,96,99..100,191,194..195,197,199,202..203,
                     205..206,212..213,216..217,219..220,223..224,226..227)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          <343..631
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..640
                     /gene="LOC107909529"
                     /coded_by="XM_041088993.1:1283..3205"
                     /db_xref="GeneID:107909529"
ORIGIN      
        1 mktslrrlrg lahhkhggea kqrpdvlalp qldelaqasq dmqdmidcye gllyaaaatt
       61 ncayefsdsl remgtcllak talnddeesg kvllmlgkvq fklqklldsy rshisqtiti
      121 psesllnelr tveemkrqcd ekrnvyehma mrykekgrsk grkgdnfsmq qlqvahdeyd
      181 deatlfvfrl kslkqgqsrs lltqaarhha aqlnffrkal ksleeiephv qkvteqqhid
      241 yrfsgleddd gdngddneny enddddyysd dyddeddgel sfdyglddqd qnmvptsrhs
      301 meldqvgltf pqvamlgask enlershrhs fsfrgeirns sqsaplfaen ksepseksqp
      361 lpsrksssyv lptpvatkgs irlgkpapqs yekiwhsspl elhkyqrllr dekisgsavi
      421 naqavlress kpasstqlpp pladkvllsv spaaasdskk skrqafsgpl tskqwpskpv
      481 svehpqlfsg pilrspmsql qaaspkvspn asppfvsspk iselhelprp patstskssr
      541 plglvgysgp lmprgqvlsa tnksavsraa splpqppdvv trsfsipsrd hrvmslpvfk
      601 pletaivsgm sqdvaspplt pislaqiqps stssksvnrn
//
LOCUS       XP_016692585             640 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g33490 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692585
VERSION     XP_016692585.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837096.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692585.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..640
                     /product="uncharacterized protein At2g33490 isoform X1"
                     /calculated_mol_wt=70839
     Region          41..229
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cd07307"
                     /db_xref="CDD:153271"
     Site            order(41,44..45,49,51..52,55..56,58..59,63,65..66,69..70,
                     72..73,76,96,99..100,191,194..195,197,199,202..203,
                     205..206,212..213,216..217,219..220,223..224,226..227)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          <343..631
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..640
                     /gene="LOC107909529"
                     /coded_by="XM_016837096.2:1205..3127"
                     /db_xref="GeneID:107909529"
ORIGIN      
        1 mktslrrlrg lahhkhggea kqrpdvlalp qldelaqasq dmqdmidcye gllyaaaatt
       61 ncayefsdsl remgtcllak talnddeesg kvllmlgkvq fklqklldsy rshisqtiti
      121 psesllnelr tveemkrqcd ekrnvyehma mrykekgrsk grkgdnfsmq qlqvahdeyd
      181 deatlfvfrl kslkqgqsrs lltqaarhha aqlnffrkal ksleeiephv qkvteqqhid
      241 yrfsgleddd gdngddneny enddddyysd dyddeddgel sfdyglddqd qnmvptsrhs
      301 meldqvgltf pqvamlgask enlershrhs fsfrgeirns sqsaplfaen ksepseksqp
      361 lpsrksssyv lptpvatkgs irlgkpapqs yekiwhsspl elhkyqrllr dekisgsavi
      421 naqavlress kpasstqlpp pladkvllsv spaaasdskk skrqafsgpl tskqwpskpv
      481 svehpqlfsg pilrspmsql qaaspkvspn asppfvsspk iselhelprp patstskssr
      541 plglvgysgp lmprgqvlsa tnksavsraa splpqppdvv trsfsipsrd hrvmslpvfk
      601 pletaivsgm sqdvaspplt pislaqiqps stssksvnrn
//
LOCUS       XP_016692586             640 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g33490 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692586
VERSION     XP_016692586.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837097.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692586.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..640
                     /product="uncharacterized protein At2g33490 isoform X1"
                     /calculated_mol_wt=70839
     Region          41..229
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cd07307"
                     /db_xref="CDD:153271"
     Site            order(41,44..45,49,51..52,55..56,58..59,63,65..66,69..70,
                     72..73,76,96,99..100,191,194..195,197,199,202..203,
                     205..206,212..213,216..217,219..220,223..224,226..227)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          <343..631
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..640
                     /gene="LOC107909529"
                     /coded_by="XM_016837097.2:376..2298"
                     /db_xref="GeneID:107909529"
ORIGIN      
        1 mktslrrlrg lahhkhggea kqrpdvlalp qldelaqasq dmqdmidcye gllyaaaatt
       61 ncayefsdsl remgtcllak talnddeesg kvllmlgkvq fklqklldsy rshisqtiti
      121 psesllnelr tveemkrqcd ekrnvyehma mrykekgrsk grkgdnfsmq qlqvahdeyd
      181 deatlfvfrl kslkqgqsrs lltqaarhha aqlnffrkal ksleeiephv qkvteqqhid
      241 yrfsgleddd gdngddneny enddddyysd dyddeddgel sfdyglddqd qnmvptsrhs
      301 meldqvgltf pqvamlgask enlershrhs fsfrgeirns sqsaplfaen ksepseksqp
      361 lpsrksssyv lptpvatkgs irlgkpapqs yekiwhsspl elhkyqrllr dekisgsavi
      421 naqavlress kpasstqlpp pladkvllsv spaaasdskk skrqafsgpl tskqwpskpv
      481 svehpqlfsg pilrspmsql qaaspkvspn asppfvsspk iselhelprp patstskssr
      541 plglvgysgp lmprgqvlsa tnksavsraa splpqppdvv trsfsipsrd hrvmslpvfk
      601 pletaivsgm sqdvaspplt pislaqiqps stssksvnrn
//
LOCUS       XP_016692592             596 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g33490 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692592
VERSION     XP_016692592.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837103.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692592.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..596
                     /product="uncharacterized protein At2g33490 isoform X2"
                     /calculated_mol_wt=66072
     Region          20..185
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cd07307"
                     /db_xref="CDD:153271"
     Region          <299..587
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..596
                     /gene="LOC107909529"
                     /coded_by="XM_016837103.2:165..1955"
                     /db_xref="GeneID:107909529"
ORIGIN      
        1 mqllqlrivl mishvvllls efsdslremg tcllaktaln ddeesgkvll mlgkvqfklq
       61 klldsyrshi sqtitipses llnelrtvee mkrqcdekrn vyehmamryk ekgrskgrkg
      121 dnfsmqqlqv ahdeyddeat lfvfrlkslk qgqsrslltq aarhhaaqln ffrkalksle
      181 eiephvqkvt eqqhidyrfs gledddgdng ddnenyendd ddyysddydd eddgelsfdy
      241 glddqdqnmv ptsrhsmeld qvgltfpqva mlgaskenle rshrhsfsfr geirnssqsa
      301 plfaenksep seksqplpsr ksssyvlptp vatkgsirlg kpapqsyeki whssplelhk
      361 yqrllrdeki sgsavinaqa vlresskpas stqlppplad kvllsvspaa asdskkskrq
      421 afsgpltskq wpskpvsveh pqlfsgpilr spmsqlqaas pkvspnaspp fvsspkisel
      481 helprppats tskssrplgl vgysgplmpr gqvlsatnks avsraasplp qppdvvtrsf
      541 sipsrdhrvm slpvfkplet aivsgmsqdv asppltpisl aqiqpsstss ksvnrn
//
LOCUS       XP_016692593             444 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein CONSTANS-LIKE 14 [Gossypium hirsutum].
ACCESSION   XP_016692593
VERSION     XP_016692593.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837104.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692593.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..444
                     /product="zinc finger protein CONSTANS-LIKE 14"
                     /calculated_mol_wt=48631
     Region          10..53
                     /region_name="Bbox1_BBX-like"
                     /note="B-box-type 1 zinc finger found in B-box (BBX)
                     family of plant transcription factors and similar
                     proteins; cd19821"
                     /db_xref="CDD:380879"
     Region          396..438
                     /region_name="CCT"
                     /note="CCT motif; pfam06203"
                     /db_xref="CDD:461849"
     CDS             1..444
                     /gene="LOC107909531"
                     /coded_by="XM_016837104.2:207..1541"
                     /db_xref="GeneID:107909531"
ORIGIN      
        1 mvtppnetvp cdfcnhrial lycradsakl cllcdhhvhs anllsrkhlr sqichncsaq
       61 pvsvwrathn lmlcqdcdwd thgtcsvsta hdgtpvegfs gcpsaldlas afgfhlhdtk
      121 psdqswnsch qhlmmpiaep cfygmsvqdl mepydslcng ktlkkqnhgs ggkykqvlyn
      181 qlaelmkrnl mgdviddygd ggggggggen glvqnaepna nflaqqqqvm qpqqqrqtpg
      241 snrivdggev lwndnlngqt pqiwdfklge aqfeevgneg sdgvfmiknf nqllrettls
      301 akllgdtchf nyhpqdymds inmnssnpgt sqgaatsesn nlpmarpsts safggtrgss
      361 scsdlvfmeq aflvgsdqgr paaaskadle llahnrgnam qrykekkktr rydkhiryes
      421 rkakadsstr vkgrfakatd spdg
//
LOCUS       XP_016692584             136 aa            linear   PLN 06-AUG-2024
DEFINITION  GSH-induced LITAF domain protein [Gossypium hirsutum].
ACCESSION   XP_016692584
VERSION     XP_016692584.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837095.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..136
                     /product="GSH-induced LITAF domain protein"
                     /calculated_mol_wt=15005
     Region          50..115
                     /region_name="LITAF"
                     /note="Possible membrane-associated motif in LPS-induced
                     tumor necrosis factor alpha factor (LITAF), also known as
                     PIG7, and other animal proteins; smart00714"
                     /db_xref="CDD:197841"
     CDS             1..136
                     /gene="LOC107909528"
                     /coded_by="XM_016837095.2:245..655"
                     /db_xref="GeneID:107909528"
ORIGIN      
        1 mskteqpvlg vpyyagprmd gyqqgripan aiygdpkgip iqqtmyrdtp apfncpycgn
       61 sgltlvrskp slaavvgcmm pfmlgicflc psmdclwhky hycptcneki adfeksdpcl
      121 vvdlpqwmqk sfalpa
//
LOCUS       XP_016692583             259 aa            linear   PLN 06-AUG-2024
DEFINITION  GEM-like protein 5 [Gossypium hirsutum].
ACCESSION   XP_016692583
VERSION     XP_016692583.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837094.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692583.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..259
                     /product="GEM-like protein 5"
                     /calculated_mol_wt=28628
     Region          146..254
                     /region_name="PH-GRAM_GEM"
                     /note="GLABRA 2 expression modulator (GEM) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13222"
                     /db_xref="CDD:270042"
     CDS             1..259
                     /gene="LOC107909527"
                     /coded_by="XM_016837094.2:247..1026"
                     /db_xref="GeneID:107909527"
ORIGIN      
        1 mtstptqent qvegsheptv eappseedik kwgthvmgsp aapsahpdnq kaalwnasdh
       61 qqiyelpyvv yspaerpshn pfepvinmfn twsrktesia rniwhnlktg psvseaawgk
      121 lnltakaite ggfeslfkqi fatdtderlk ktfacylstt tgpvagtlyl starvafcsd
      181 rplsftapsg qetwsyykvm iplanvgsvn pvvmkenpve syiqvvtvdg hdfwfmgfvn
      241 fekasfhlln svqdskplp
//
LOCUS       XP_016692582             102 aa            linear   PLN 06-AUG-2024
DEFINITION  cysteine-rich and transmembrane domain-containing protein WIH2
            [Gossypium hirsutum].
ACCESSION   XP_016692582
VERSION     XP_016692582.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837093.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..102
                     /product="cysteine-rich and transmembrane
                     domain-containing protein WIH2"
                     /calculated_mol_wt=10975
     CDS             1..102
                     /gene="LOC107909526"
                     /coded_by="XM_016837093.2:215..523"
                     /db_xref="GeneID:107909526"
ORIGIN      
        1 msynhqhvsh qplapsgpyp ppgpdfpppp tsvgynrthr spsppqpgyq gycyegypss
       61 spgllpprlp prneythngc tsfltgclat lcccclledc vf
//
LOCUS       XP_016692581             197 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TIFY 9 [Gossypium hirsutum].
ACCESSION   XP_016692581
VERSION     XP_016692581.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837092.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..197
                     /product="protein TIFY 9"
                     /calculated_mol_wt=21636
     Region          105..135
                     /region_name="tify"
                     /note="tify domain; pfam06200"
                     /db_xref="CDD:461847"
     Region          171..195
                     /region_name="Jas_motif"
                     /note="Jas motif; pfam09425"
                     /db_xref="CDD:430603"
     CDS             1..197
                     /gene="LOC107909525"
                     /coded_by="XM_016837092.2:175..768"
                     /db_xref="GeneID:107909525"
ORIGIN      
        1 msrasveldf fgmeeqicck srfqksldrr lsfrglqgal skvnpeliks viasglknpq
       61 gqdnvyqmds nksfsvpssp ketqslfpal plltpaarat sengpetapl tifyngtvsv
      121 fnvprdkaes ilklaveveg nsknvepids kvasppsdrq qlletlngdl piarrkslqr
      181 flekrkermt caspyac
//
LOCUS       XP_016692572             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692572
VERSION     XP_016692572.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837083.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="uncharacterized protein At2g29880 isoform X1"
                     /calculated_mol_wt=36351
     Region          117..216
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..316
                     /gene="LOC107909522"
                     /coded_by="XM_016837083.2:212..1162"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 miaiscflrl ryyspsykvr perhhqwnll illvkksfiy lisseadsvh vsllttffpl
       61 fldamftlcy cflfffglfd cflhpqlnvl yslnhfmsgf sqssvssqns rgtkrkwvpe
      121 edvalvtcmv dlhnvgtfnv dtgfkagyln elkkmlekvl pntmlkakpn lesrirtlkr
      181 dwsivydmls gkntsdfgwd ehkqlvvaed vvwnsyinsh keagqfkhhs fpyydqltvi
      241 yakdratgkd aqtatdviee idvedvattn theerndfyg ceadvslddm dlsatqtqpa
      301 rnkgdptfsk kkkkdf
//
LOCUS       XP_016692573             309 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692573
VERSION     XP_016692573.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837084.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..309
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=35474
     Region          117..210
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..309
                     /gene="LOC107909522"
                     /coded_by="XM_016837084.2:185..1114"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 miaiscflrl ryyspsykvr perhhqwnll illvkksfiy lisseadsvh vsllttffpl
       61 fldamftlcy cflfffglfd cflhpqlnvl yslnhfmsgf sqssvssqns rgtkrkwvpe
      121 edvalvtcmv dlhnvgtfnv dtgfkagyln elkkmlekvl pntmlkakpn lesrirtlkr
      181 dwsivydmls gkntsdfgwd ehkqlvvaed vshkeagqfk hhsfpyydql tviyakdrat
      241 gkdaqtatdv ieeidvedva ttntheernd fygceadvsl ddmdlsatqt qparnkgdpt
      301 fskkkkkdf
//
LOCUS       XP_016692574             305 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_016692574
VERSION     XP_016692574.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837085.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..305
                     /product="uncharacterized protein At2g29880 isoform X3"
                     /calculated_mol_wt=35095
     Region          117..216
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..305
                     /gene="LOC107909522"
                     /coded_by="XM_016837085.2:220..1137"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 miaiscflrl ryyspsykvr perhhqwnll illvkksfiy lisseadsvh vsllttffpl
       61 fldamftlcy cflfffglfd cflhpqlnvl yslnhfmsgf sqssvssqns rgtkrkwvpe
      121 edvalvtcmv dlhnvgtfnv dtgfkagyln elkkmlekvl pntmlkakpn lesrirtlkr
      181 dwsivydmls gkntsdfgwd ehkqlvvaed vvwnsyinsh keagqfkhhs fpyydqltvi
      241 yakdratgkd aqtatdviee idvedvattn theerndfyg ceadvslddm dlsatqtqpa
      301 rnkdh
//
LOCUS       XP_016692575             285 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X4 [Gossypium hirsutum].
ACCESSION   XP_016692575
VERSION     XP_016692575.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837086.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..285
                     /product="uncharacterized protein At2g29880 isoform X4"
                     /calculated_mol_wt=32874
     Region          86..185
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..285
                     /gene="LOC107909522"
                     /coded_by="XM_016837086.2:218..1075"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 miaiscflrl ryyspsykvr perhhqwnll illvkkmcyc flfffglfdc flhpqlnvly
       61 slnhfmsgfs qssvssqnsr gtkrkwvpee dvalvtcmvd lhnvgtfnvd tgfkagylne
      121 lkkmlekvlp ntmlkakpnl esrirtlkrd wsivydmlsg kntsdfgwde hkqlvvaedv
      181 vwnsyinshk eagqfkhhsf pyydqltviy akdratgkda qtatdvieei dvedvattnt
      241 heerndfygc eadvslddmd lsatqtqpar nkgdptfskk kkkdf
//
LOCUS       XP_040944928             278 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944928
VERSION     XP_040944928.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088994.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..278
                     /product="uncharacterized protein isoform X5"
                     /calculated_mol_wt=31997
     Region          86..179
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..278
                     /gene="LOC107909522"
                     /coded_by="XM_041088994.1:186..1022"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 miaiscflrl ryyspsykvr perhhqwnll illvkkmcyc flfffglfdc flhpqlnvly
       61 slnhfmsgfs qssvssqnsr gtkrkwvpee dvalvtcmvd lhnvgtfnvd tgfkagylne
      121 lkkmlekvlp ntmlkakpnl esrirtlkrd wsivydmlsg kntsdfgwde hkqlvvaedv
      181 shkeagqfkh hsfpyydqlt viyakdratg kdaqtatdvi eeidvedvat tntheerndf
      241 ygceadvsld dmdlsatqtq parnkgdptf skkkkkdf
//
LOCUS       XP_040944929             257 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944929
VERSION     XP_040944929.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088995.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..257
                     /product="uncharacterized protein At2g29880 isoform X6"
                     /calculated_mol_wt=29424
     Region          58..157
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..257
                     /gene="LOC107909522"
                     /coded_by="XM_041088995.1:216..989"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 miaiscflrl ryyspsykvr perhhqwnll illvkkimsg fsqssvssqn srgtkrkwvp
       61 eedvalvtcm vdlhnvgtfn vdtgfkagyl nelkkmlekv lpntmlkakp nlesrirtlk
      121 rdwsivydml sgkntsdfgw dehkqlvvae dvvwnsyins hkeagqfkhh sfpyydqltv
      181 iyakdratgk daqtatdvie eidvedvatt ntheerndfy gceadvsldd mdlsatqtqp
      241 arnkgdptfs kkkkkdf
//
LOCUS       XP_016692576             252 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_016692576
VERSION     XP_016692576.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837087.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="uncharacterized protein At2g29880 isoform X7"
                     /calculated_mol_wt=28780
     Region          53..152
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..252
                     /gene="LOC107909522"
                     /coded_by="XM_016837087.2:404..1162"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 mftlcycflf ffglfdcflh pqlnvlysln hfmsgfsqss vssqnsrgtk rkwvpeedva
       61 lvtcmvdlhn vgtfnvdtgf kagylnelkk mlekvlpntm lkakpnlesr irtlkrdwsi
      121 vydmlsgknt sdfgwdehkq lvvaedvvwn syinshkeag qfkhhsfpyy dqltviyakd
      181 ratgkdaqta tdvieeidve dvattnthee rndfygcead vslddmdlsa tqtqparnkg
      241 dptfskkkkk df
//
LOCUS       XP_016692577             252 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X7 [Gossypium hirsutum].
ACCESSION   XP_016692577
VERSION     XP_016692577.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837088.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..252
                     /product="uncharacterized protein At2g29880 isoform X7"
                     /calculated_mol_wt=28780
     Region          53..152
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..252
                     /gene="LOC107909522"
                     /coded_by="XM_016837088.2:689..1447"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 mftlcycflf ffglfdcflh pqlnvlysln hfmsgfsqss vssqnsrgtk rkwvpeedva
       61 lvtcmvdlhn vgtfnvdtgf kagylnelkk mlekvlpntm lkakpnlesr irtlkrdwsi
      121 vydmlsgknt sdfgwdehkq lvvaedvvwn syinshkeag qfkhhsfpyy dqltviyakd
      181 ratgkdaqta tdvieeidve dvattnthee rndfygcead vslddmdlsa tqtqparnkg
      241 dptfskkkkk df
//
LOCUS       XP_016692579             249 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_016692579
VERSION     XP_016692579.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837090.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..249
                     /product="uncharacterized protein At2g29880 isoform X8"
                     /calculated_mol_wt=28418
     Region          50..149
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..249
                     /gene="LOC107909522"
                     /coded_by="XM_016837090.2:321..1070"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 mcycflfffg lfdcflhpql nvlyslnhfm sgfsqssvss qnsrgtkrkw vpeedvalvt
       61 cmvdlhnvgt fnvdtgfkag ylnelkkmle kvlpntmlka kpnlesrirt lkrdwsivyd
      121 mlsgkntsdf gwdehkqlvv aedvvwnsyi nshkeagqfk hhsfpyydql tviyakdrat
      181 gkdaqtatdv ieeidvedva ttntheernd fygceadvsl ddmdlsatqt qparnkgdpt
      241 fskkkkkdf
//
LOCUS       XP_016692580             249 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At2g29880 isoform X8 [Gossypium hirsutum].
ACCESSION   XP_016692580
VERSION     XP_016692580.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837091.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..249
                     /product="uncharacterized protein At2g29880 isoform X8"
                     /calculated_mol_wt=28418
     Region          50..149
                     /region_name="GT1"
                     /note="myb-like, SANT family; cl23759"
                     /db_xref="CDD:474047"
     CDS             1..249
                     /gene="LOC107909522"
                     /coded_by="XM_016837091.2:606..1355"
                     /db_xref="GeneID:107909522"
ORIGIN      
        1 mcycflfffg lfdcflhpql nvlyslnhfm sgfsqssvss qnsrgtkrkw vpeedvalvt
       61 cmvdlhnvgt fnvdtgfkag ylnelkkmle kvlpntmlka kpnlesrirt lkrdwsivyd
      121 mlsgkntsdf gwdehkqlvv aedvvwnsyi nshkeagqfk hhsfpyydql tviyakdrat
      181 gkdaqtatdv ieeidvedva ttntheernd fygceadvsl ddmdlsatqt qparnkgdpt
      241 fskkkkkdf
//
LOCUS       XP_016692570             354 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAX PANICLE 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692570
VERSION     XP_016692570.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837081.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..354
                     /product="protein LAX PANICLE 2 isoform X1"
                     /calculated_mol_wt=38996
     Region          249..350
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..354
                     /gene="LOC107909521"
                     /coded_by="XM_016837081.2:346..1410"
                     /db_xref="GeneID:107909521"
ORIGIN      
        1 mtmvpaenlp kqhhlphggg ggfygycgss ytesfglmsr vygydfhaea yvgsdlaanr
       61 maedesttns lneagsnskd nnqelelerd egwlqlglgg qptryddnkh yqgdptarrg
      121 gmveldllpg gmpqqarpll gpifhmpdfr appppppplm hsfssslffq hqqgssstfp
      181 hhgelsssfr piaqniaaap sassssssss lvplgsyfar pfqvqsemdv agpssdvrii
      241 dpprrphsgi wfmlqasqnq akepflpqip ksylrikdgk mtvrllmkyl vsklsldses
      301 eqieircrgq qlqpsltlqq vrdqiwssrd avtllprtst adhlmvlhyg rtpi
//
LOCUS       XP_016692571             353 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LAX PANICLE 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692571
VERSION     XP_016692571.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837082.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..353
                     /product="protein LAX PANICLE 2 isoform X2"
                     /calculated_mol_wt=38868
     Region          249..349
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..353
                     /gene="LOC107909521"
                     /coded_by="XM_016837082.2:345..1406"
                     /db_xref="GeneID:107909521"
ORIGIN      
        1 mtmvpaenlp kqhhlphggg ggfygycgss ytesfglmsr vygydfhaea yvgsdlaanr
       61 maedesttns lneagsnskd nnqelelerd egwlqlglgg qptryddnkh yqgdptarrg
      121 gmveldllpg gmpqqarpll gpifhmpdfr appppppplm hsfssslffq hqqgssstfp
      181 hhgelsssfr piaqniaaap sassssssss lvplgsyfar pfqvqsemdv agpssdvrii
      241 dpprrphsgi wfmlqasqnq akepflpqip ksylrikdgk mtvrllmkyl vsklsldses
      301 eieircrgqq lqpsltlqqv rdqiwssrda vtllprtsta dhlmvlhygr tpi
//
LOCUS       XP_040944930             243 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NETWORKED 3C [Gossypium hirsutum].
ACCESSION   XP_040944930
VERSION     XP_040944930.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088996.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..243
                     /product="protein NETWORKED 3C"
                     /calculated_mol_wt=28140
     Region          <25..78
                     /region_name="KIP1"
                     /note="KIP1-like protein; pfam07765"
                     /db_xref="CDD:429647"
     CDS             1..243
                     /gene="LOC121214778"
                     /coded_by="XM_041088996.1:89..820"
                     /db_xref="GeneID:121214778"
ORIGIN      
        1 mcylqqtyfv qlirmdpihv aasndfdmki ngilsiilqd egdsfakrae myyqkrpqli
       61 qmvedlhksy rsladkyeql rsqlnhgshp tllsslsspv nqvqgyveln aedpdletef
      121 dddvsnhvss keskmkaedk irqgekkkrs ngigmqrnts dgyeaamlen eklwnelrfk
      181 vselvednls hqaelirrnd ekreiirdlc skmkmdenka ltanntrsqv srlkrlflgk
      241 fmk
//
LOCUS       XP_016692561             463 aa            linear   PLN 06-AUG-2024
DEFINITION  serine carboxypeptidase-like 45 [Gossypium hirsutum].
ACCESSION   XP_016692561
VERSION     XP_016692561.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837072.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692561.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..463
                     /product="serine carboxypeptidase-like 45"
                     /calculated_mol_wt=51775
     Region          38..456
                     /region_name="Peptidase_S10"
                     /note="Serine carboxypeptidase; pfam00450"
                     /db_xref="CDD:459815"
     CDS             1..463
                     /gene="LOC107909518"
                     /coded_by="XM_016837072.2:117..1508"
                     /db_xref="GeneID:107909518"
ORIGIN      
        1 mlglawrsva lglillevwf svqvecfpal fdrisrlpgq pkvgfqqyag yvtvdkrkqr
       61 alfyyfaeae vdpaskplvl wlnggpgcss lgvgafseng pfrpsgevlv kneyswnrea
      121 nmlyleapvg vgfsysadds syeavndkit ardnlvflqn wflkfpqykn rslfitgesy
      181 aghyipqlae lmhqfnkkek lfnlkgialg npvlefaadf nsraeffwsh glisdstykl
      241 fttscnysry vseyyrgnvs picsrvmgqv stetsrfvdk ydvtldvcis svlsqskilt
      301 tqqvgdtidv cvedetvnyl nrqdvqkalh arlvgvhkwa vcssvldyel ldleiptiti
      361 vgrlvkagip vmvysgdqds vipltgsrkl vnqlaeelgl kttvpyrvwf egqqvggwtq
      421 aygnilsfat irgasheapf sqperslvlf kaflegrplp eaf
//
LOCUS       XP_016692563             294 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NEOXANTHIN-DEFICIENT 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692563
VERSION     XP_016692563.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837074.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..294
                     /product="protein NEOXANTHIN-DEFICIENT 1 isoform X1"
                     /calculated_mol_wt=31974
     CDS             1..294
                     /gene="LOC107909519"
                     /coded_by="XM_016837074.2:444..1328"
                     /db_xref="GeneID:107909519"
ORIGIN      
        1 mglgetkssp gygnppwifk gsalyqlhlv kaetvrafip kelrlveafg ytlggfflan
       61 yddspagvfd elvviagivw npptscawaa rvlvnseeac hhgrkevglp sqvarfskri
      121 tpvprqtkdk fggflnmigv gttichskdc mdvqvtevvg passdicnik lltdvptpkf
      181 nkwmgpsitm slpsfsgqte ynpnllkysc rlacrvravr pakvsgpspl kkernhdses
      241 rgftaeevvd narnlsisvm lskpilalef nflemqveap iilsnnttss lpaa
//
LOCUS       XP_016692564             294 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NEOXANTHIN-DEFICIENT 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692564
VERSION     XP_016692564.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837075.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..294
                     /product="protein NEOXANTHIN-DEFICIENT 1 isoform X1"
                     /calculated_mol_wt=31974
     CDS             1..294
                     /gene="LOC107909519"
                     /coded_by="XM_016837075.2:189..1073"
                     /db_xref="GeneID:107909519"
ORIGIN      
        1 mglgetkssp gygnppwifk gsalyqlhlv kaetvrafip kelrlveafg ytlggfflan
       61 yddspagvfd elvviagivw npptscawaa rvlvnseeac hhgrkevglp sqvarfskri
      121 tpvprqtkdk fggflnmigv gttichskdc mdvqvtevvg passdicnik lltdvptpkf
      181 nkwmgpsitm slpsfsgqte ynpnllkysc rlacrvravr pakvsgpspl kkernhdses
      241 rgftaeevvd narnlsisvm lskpilalef nflemqveap iilsnnttss lpaa
//
LOCUS       XP_016692565             294 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NEOXANTHIN-DEFICIENT 1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692565
VERSION     XP_016692565.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837076.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..294
                     /product="protein NEOXANTHIN-DEFICIENT 1 isoform X1"
                     /calculated_mol_wt=31974
     CDS             1..294
                     /gene="LOC107909519"
                     /coded_by="XM_016837076.2:183..1067"
                     /db_xref="GeneID:107909519"
ORIGIN      
        1 mglgetkssp gygnppwifk gsalyqlhlv kaetvrafip kelrlveafg ytlggfflan
       61 yddspagvfd elvviagivw npptscawaa rvlvnseeac hhgrkevglp sqvarfskri
      121 tpvprqtkdk fggflnmigv gttichskdc mdvqvtevvg passdicnik lltdvptpkf
      181 nkwmgpsitm slpsfsgqte ynpnllkysc rlacrvravr pakvsgpspl kkernhdses
      241 rgftaeevvd narnlsisvm lskpilalef nflemqveap iilsnnttss lpaa
//
LOCUS       XP_016692566             266 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NEOXANTHIN-DEFICIENT 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692566
VERSION     XP_016692566.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837077.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="protein NEOXANTHIN-DEFICIENT 1 isoform X2"
                     /calculated_mol_wt=28848
     CDS             1..266
                     /gene="LOC107909519"
                     /coded_by="XM_016837077.2:446..1246"
                     /db_xref="GeneID:107909519"
ORIGIN      
        1 mglgetkssp gygnppwifk grytlggffl anyddspagv fdelvviagi vwnpptscaw
       61 aarvlvnsee achhgrkevg lpsqvarfsk ritpvprqtk dkfggflnmi gvgttichsk
      121 dcmdvqvtev vgpassdicn iklltdvptp kfnkwmgpsi tmslpsfsgq teynpnllky
      181 scrlacrvra vrpakvsgps plkkernhds esrgftaeev vdnarnlsis vmlskpilal
      241 efnflemqve apiilsnntt sslpaa
//
LOCUS       XP_016692567             266 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NEOXANTHIN-DEFICIENT 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692567
VERSION     XP_016692567.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837078.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="protein NEOXANTHIN-DEFICIENT 1 isoform X2"
                     /calculated_mol_wt=28848
     CDS             1..266
                     /gene="LOC107909519"
                     /coded_by="XM_016837078.2:190..990"
                     /db_xref="GeneID:107909519"
ORIGIN      
        1 mglgetkssp gygnppwifk grytlggffl anyddspagv fdelvviagi vwnpptscaw
       61 aarvlvnsee achhgrkevg lpsqvarfsk ritpvprqtk dkfggflnmi gvgttichsk
      121 dcmdvqvtev vgpassdicn iklltdvptp kfnkwmgpsi tmslpsfsgq teynpnllky
      181 scrlacrvra vrpakvsgps plkkernhds esrgftaeev vdnarnlsis vmlskpilal
      241 efnflemqve apiilsnntt sslpaa
//
LOCUS       XP_016692568             266 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NEOXANTHIN-DEFICIENT 1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692568
VERSION     XP_016692568.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837079.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..266
                     /product="protein NEOXANTHIN-DEFICIENT 1 isoform X2"
                     /calculated_mol_wt=28848
     CDS             1..266
                     /gene="LOC107909519"
                     /coded_by="XM_016837079.2:184..984"
                     /db_xref="GeneID:107909519"
ORIGIN      
        1 mglgetkssp gygnppwifk grytlggffl anyddspagv fdelvviagi vwnpptscaw
       61 aarvlvnsee achhgrkevg lpsqvarfsk ritpvprqtk dkfggflnmi gvgttichsk
      121 dcmdvqvtev vgpassdicn iklltdvptp kfnkwmgpsi tmslpsfsgq teynpnllky
      181 scrlacrvra vrpakvsgps plkkernhds esrgftaeev vdnarnlsis vmlskpilal
      241 efnflemqve apiilsnntt sslpaa
//
LOCUS       XP_016692559             909 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016692559
VERSION     XP_016692559.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837070.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692559.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..909
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD3 isoform X1"
                     /calculated_mol_wt=101758
     Region          93..293
                     /region_name="BAR_SFC_plant"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of the plant
                     protein SCARFACE (SFC); cd07606"
                     /db_xref="CDD:153290"
     Site            order(100,103..104,108,110..111,114..115,117..118,
                     128..129,131..132,135..136,138..139,142,159,162..163,255,
                     258..259,261,266,269..270,272..273,276..277,280..281,
                     283..284,287..288,290..291)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153290"
     Region          373..510
                     /region_name="PH_ACAP"
                     /note="ArfGAP with coiled-coil, ankyrin repeat and PH
                     domains Pleckstrin homology (PH) domain; cd13250"
                     /db_xref="CDD:270070"
     Region          581..709
                     /region_name="ArfGap"
                     /note="GTPase-activating protein (GAP) for the ADP
                     ribosylation factors (ARFs); cd08204"
                     /db_xref="CDD:350058"
     Site            order(593,596,613,616,621)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350058"
     Site            order(593,596,613,616)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350058"
     Region          <814..904
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(816,818,822..823,826..828,830..831,835,838,847,849,
                     851,855..856,859..861,863..864,868,871,880,882,884,
                     888..889,892)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          816..847
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          849..880
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..909
                     /gene="LOC107909516"
                     /coded_by="XM_016837070.2:16..2745"
                     /db_xref="GeneID:107909516"
ORIGIN      
        1 marylpispq fklqkvdisl hasplalfsf lyflfffseg grgkegnscq khtvvtpfsr
       61 tsskrrrrfw ysqhavtnfg stkrnrrlkg kekiqcmees aellrerslr ffkgcrkyte
      121 glgegydgdi afasalemfg gghndpisva fggpvmtkft ialreigtyk evlrsqvete
      181 lneklmqfvn rdlldvkear krfdkaslvy dqarekflsl rkstksnian vleeelhnar
      241 stfeqarfnl vtalsnveak krfefleavs gtmdahlryf kqgyellhqm epyinqvmty
      301 arqsrersky dqaalnermq eykrqvdres rlssngsngs pngdgiqaig rsshkmieav
      361 mqsaakgkvq tirqgylskr ssslrgdwkr rffvldsrgm lyyyrkqcsk ssgsgsqlsg
      421 qrnsselgsg llgrwlsshy hggvhdeksv ahhtvnllts tikvdadqsd lrfcfriisp
      481 tknytlqaes aldqmdwiek itgviaslls sqaperclsa spmgsghhrs asesssfess
      541 dfdhtgveey asernlvsah nerqsrasqh qrsclknekp idvlrrvsgn dkcadcgape
      601 pdwaslnlgv llciecsgvh rnlgvhiskv rsltldvkvw dpsvislfqs lgntfansvw
      661 eellhsrnaf hvdltpsfsk sdkpqlllmg kpchsdsisv kekfihakya eklfvcklkd
      721 eqhpqsvaqq iwegvrandk kavyryivnc evdlnavyeq ssgssltlak vmllqehtnv
      781 cnnsssyitg dssdrssass fnlvgtsegq ttddldgctl lhlacetgdi gmielllqyg
      841 aninvmdsrg qtplhrcilk gkaavaklll trgadpqvln renktpvela vesdfddsev
      901 lallsdsng
//
LOCUS       XP_016692560             831 aa            linear   PLN 06-AUG-2024
DEFINITION  ADP-ribosylation factor GTPase-activating protein AGD3 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016692560
VERSION     XP_016692560.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837071.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692560.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..831
                     /product="ADP-ribosylation factor GTPase-activating
                     protein AGD3 isoform X2"
                     /calculated_mol_wt=92719
     Region          14..215
                     /region_name="BAR_SFC_plant"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of the plant
                     protein SCARFACE (SFC); cd07606"
                     /db_xref="CDD:153290"
     Site            order(22,25..26,30,32..33,36..37,39..40,50..51,53..54,
                     57..58,60..61,64,81,84..85,177,180..181,183,188,191..192,
                     194..195,198..199,202..203,205..206,209..210,212..213)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153290"
     Region          295..432
                     /region_name="PH_ACAP"
                     /note="ArfGAP with coiled-coil, ankyrin repeat and PH
                     domains Pleckstrin homology (PH) domain; cd13250"
                     /db_xref="CDD:270070"
     Region          503..631
                     /region_name="ArfGap"
                     /note="GTPase-activating protein (GAP) for the ADP
                     ribosylation factors (ARFs); cd08204"
                     /db_xref="CDD:350058"
     Site            order(515,518,535,538,543)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350058"
     Site            order(515,518,535,538)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350058"
     Region          <736..826
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(738,740,744..745,748..750,752..753,757,760,769,771,
                     773,777..778,781..783,785..786,790,793,802,804,806,
                     810..811,814)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          738..769
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          771..802
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..831
                     /gene="LOC107909516"
                     /coded_by="XM_016837071.2:856..3351"
                     /db_xref="GeneID:107909516"
ORIGIN      
        1 mhfaklddsp mfrkqiqcme esaellrers lrffkgcrky teglgegydg diafasalem
       61 fggghndpis vafggpvmtk ftialreigt ykevlrsqve telneklmqf vnrdlldvke
      121 arkrfdkasl vydqarekfl slrkstksni anvleeelhn arstfeqarf nlvtalsnve
      181 akkrfeflea vsgtmdahlr yfkqgyellh qmepyinqvm tyarqsrers kydqaalner
      241 mqeykrqvdr esrlssngsn gspngdgiqa igrsshkmie avmqsaakgk vqtirqgyls
      301 krssslrgdw krrffvldsr gmlyyyrkqc skssgsgsql sgqrnsselg sgllgrwlss
      361 hyhggvhdek svahhtvnll tstikvdadq sdlrfcfrii sptknytlqa esaldqmdwi
      421 ekitgviasl lssqapercl saspmgsghh rsasesssfe ssdfdhtgve eyasernlvs
      481 ahnerqsras qhqrsclkne kpidvlrrvs gndkcadcga pepdwaslnl gvllciecsg
      541 vhrnlgvhis kvrsltldvk vwdpsvislf qslgntfans vweellhsrn afhvdltpsf
      601 sksdkpqlll mgkpchsdsi svkekfihak yaeklfvckl kdeqhpqsva qqiwegvran
      661 dkkavyryiv ncevdlnavy eqssgssltl akvmllqeht nvcnnsssyi tgdssdrssa
      721 ssfnlvgtse gqttddldgc tllhlacetg digmielllq yganinvmds rgqtplhrci
      781 lkgkaavakl lltrgadpqv lnrenktpve lavesdfdds evlallsdsn g
//
LOCUS       XP_016692558             436 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692558
VERSION     XP_016692558.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837069.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..436
                     /product="uncharacterized protein"
                     /calculated_mol_wt=48957
     CDS             1..436
                     /gene="LOC107909515"
                     /coded_by="XM_016837069.2:196..1506"
                     /db_xref="GeneID:107909515"
ORIGIN      
        1 mgdsfklrve ktfgslqssq sssqqqrppl wslsdaever rewrresaad redtlcsssf
       61 deflkeerky rsgrrketed dldndddddd ddndggssqs hsrkideygd eweirsclgm
      121 dstldneeee deydkvasgr enagerlyms diadhgsfln shnilqraln httsnkdhca
      181 nhmaarirlk eddeeaqkln ycdgsnseir elsdmkasdn gchlrsilkr kdsgtgfkpr
      241 krvrfdsack dgweeqfeks edhptgillm nsedsdgvsp aendravpdy lrnpsrytry
      301 sfdssskfge eynaqawkdv lklapsskct eslseqedap cdlpksvtfi pkrkpgilql
      361 vcdvsevqek eneckksldp krlpvgiaag aaksgeddat eddipevsaa ngtpvipkgg
      421 rsyrvksqpe gldqeg
//
LOCUS       XP_040944931             996 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944931
VERSION     XP_040944931.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088997.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..996
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X1"
                     /calculated_mol_wt=112480
     Region          13..431
                     /region_name="GAT1"
                     /note="GATA Zn-finger-containing transcription factor
                     [Transcription]; COG5641"
                     /db_xref="CDD:227928"
     Region          510..672
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          729..967
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(825..826,919..924,932..934,963..966)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(825..826,920..924,965)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..996
                     /gene="LOC107888804"
                     /coded_by="XM_041088997.1:236..3226"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 meiqrrvspr fqnlpncgns niekiwnatk srktlntrgs prfqnllnvg nsniekirna
       61 tdsgkksntr aspnsnivki rnetdsakis ntrvsprfqn lpkfvkmrda tdtrkksntr
      121 vsprfqnlpn ggnsnnekkr datlstktsn trasprfqnl pniekiwdat dsrttsntrv
      181 ssrfqnlpng gnsnnekkrd atpstktsnt rvsprfqnlp kfekiwgatd prktsntrvs
      241 prfqnlpngd nsnteklrda tlsiktsntr vsprfqnvpn vdnsniektw dptdsrktln
      301 trvsprfqtl pngdnsniek iqnvpdsrkt pntrvsprlq siplekrpfy gssqkrktln
      361 dsqdeimvkk hkvgntklec lsngyvtven gekdvadlqe tgskggnygd dltsihgist
      421 tmavkdklrl fnkyflhfsk aedarcyrvn gsasdheian gkikdkeegc eghvkqakrs
      481 khkgwvtkrp dlkaisemln knevlyhery fgdlpgievg hrfysraemv avglhklllk
      541 ridyigkpyv kseyngytfp laaaivmsgq yeddfgnree ivytgegekd ipgkkrqfsd
      601 qvmrcgnlal knnkkqsvpv rvirghkcdd syskkvyskk vyiydglykv tgywdekgvs
      661 gfkvfkyrlk rlrgqdnlts qnqvhfvrgk vsrvqqelpg lvckdlsngq edkcipvfnf
      721 ynpslaptgf kyinsikvak nvsippdapg cncrgkctnp rscscaqlng gdfpyvsrdg
      781 grlfeakdvv fecgpncgcg pecvnrtsqq glkyqlevyr tkekgwavrs ldfipsgapv
      841 ceyvgilrkn deledisend yifeidcwht mkgiggrerr lgdvslpmsn lvdevdertl
      901 esepepefci dassfgnvar finhscdpnl fvqcilsshh dvrlarivlf aaddiprmqe
      961 ltydynyaid svigpdgktk qlpcfcgtse crkrly
//
LOCUS       XP_040944932             969 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944932
VERSION     XP_040944932.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088998.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..969
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X2"
                     /calculated_mol_wt=109602
     Region          61..>330
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          483..645
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          702..940
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(798..799,892..897,905..907,936..939)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(798..799,893..897,938)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..969
                     /gene="LOC107888804"
                     /coded_by="XM_041088998.1:236..3145"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 meiqrrvspr fqnlpncgns niekiwnatk srktlntrgs prfqnllnvg nsniekirna
       61 tdsgkksntr aspnsnivki rnetdsakis ntrvsprfqn lpkfvkmrda tdtrkksntr
      121 vsprfqnlpn ggnsnnekkr datlstktsn trasprfqnl pniekiwdat dsrttsntrv
      181 ssrfqnlpng gnsnnekkrd atpstktsnt rvsprfqnlp kfekiwgatd prktsntrvs
      241 prfqnlpngd nsnteklrda tlsiktsntr vsprfqnvpn vdnsniektw dptdsrktln
      301 trvsprfqtl pngdnsniek iqnvpdsrkt pntrvsprlq siplekrpfy gssqkrktln
      361 dsqdeimvkk hketgskggn ygddltsihg isttmavkdk lrlfnkyflh fskaedarcy
      421 rvngsasdhe iangkikdke egceghvkqa krskhkgwvt krpdlkaise mlnknevlyh
      481 eryfgdlpgi evghrfysra emvavglhkl llkridyigk pyvkseyngy tfplaaaivm
      541 sgqyeddfgn reeivytgeg ekdipgkkrq fsdqvmrcgn lalknnkkqs vpvrvirghk
      601 cddsyskkvy skkvyiydgl ykvtgywdek gvsgfkvfky rlkrlrgqdn ltsqnqvhfv
      661 rgkvsrvqqe lpglvckdls ngqedkcipv fnfynpslap tgfkyinsik vaknvsippd
      721 apgcncrgkc tnprscscaq lnggdfpyvs rdggrlfeak dvvfecgpnc gcgpecvnrt
      781 sqqglkyqle vyrtkekgwa vrsldfipsg apvceyvgil rkndeledis endyifeidc
      841 whtmkgiggr errlgdvslp msnlvdevde rtlesepepe fcidassfgn varfinhscd
      901 pnlfvqcils shhdvrlari vlfaaddipr mqeltydyny aidsvigpdg ktkqlpcfcg
      961 tsecrkrly
//
LOCUS       XP_040944933             969 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944933
VERSION     XP_040944933.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041088999.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..969
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X3"
                     /calculated_mol_wt=109314
     Region          61..>330
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          510..672
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          729..959
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(825..826,920..924)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..969
                     /gene="LOC107888804"
                     /coded_by="XM_041088999.1:228..3137"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 meiqrrvspr fqnlpncgns niekiwnatk srktlntrgs prfqnllnvg nsniekirna
       61 tdsgkksntr aspnsnivki rnetdsakis ntrvsprfqn lpkfvkmrda tdtrkksntr
      121 vsprfqnlpn ggnsnnekkr datlstktsn trasprfqnl pniekiwdat dsrttsntrv
      181 ssrfqnlpng gnsnnekkrd atpstktsnt rvsprfqnlp kfekiwgatd prktsntrvs
      241 prfqnlpngd nsnteklrda tlsiktsntr vsprfqnvpn vdnsniektw dptdsrktln
      301 trvsprfqtl pngdnsniek iqnvpdsrkt pntrvsprlq siplekrpfy gssqkrktln
      361 dsqdeimvkk hkvgntklec lsngyvtven gekdvadlqe tgskggnygd dltsihgist
      421 tmavkdklrl fnkyflhfsk aedarcyrvn gsasdheian gkikdkeegc eghvkqakrs
      481 khkgwvtkrp dlkaisemln knevlyhery fgdlpgievg hrfysraemv avglhklllk
      541 ridyigkpyv kseyngytfp laaaivmsgq yeddfgnree ivytgegekd ipgkkrqfsd
      601 qvmrcgnlal knnkkqsvpv rvirghkcdd syskkvyskk vyiydglykv tgywdekgvs
      661 gfkvfkyrlk rlrgqdnlts qnqvhfvrgk vsrvqqelpg lvckdlsngq edkcipvfnf
      721 ynpslaptgf kyinsikvak nvsippdapg cncrgkctnp rscscaqlng gdfpyvsrdg
      781 grlfeakdvv fecgpncgcg pecvnrtsqq glkyqlevyr tkekgwavrs ldfipsgapv
      841 ceyvgilrkn deledisend yifeidcwht mkgiggrerr lgdvslpmsn lvdevdertl
      901 esepepefci dassfgnvar finhscdpnl fvqcilsshh dvrlarivlf aaddiprmql
      961 snacyssth
//
LOCUS       XP_040944934             896 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5
            isoform X4 [Gossypium hirsutum].
ACCESSION   XP_040944934
VERSION     XP_040944934.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089000.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..896
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH5 isoform X4"
                     /calculated_mol_wt=101412
     Region          13..431
                     /region_name="GAT1"
                     /note="GATA Zn-finger-containing transcription factor
                     [Transcription]; COG5641"
                     /db_xref="CDD:227928"
     Region          510..672
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          729..>877
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     CDS             1..896
                     /gene="LOC107888804"
                     /coded_by="XM_041089000.1:228..2918"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 meiqrrvspr fqnlpncgns niekiwnatk srktlntrgs prfqnllnvg nsniekirna
       61 tdsgkksntr aspnsnivki rnetdsakis ntrvsprfqn lpkfvkmrda tdtrkksntr
      121 vsprfqnlpn ggnsnnekkr datlstktsn trasprfqnl pniekiwdat dsrttsntrv
      181 ssrfqnlpng gnsnnekkrd atpstktsnt rvsprfqnlp kfekiwgatd prktsntrvs
      241 prfqnlpngd nsnteklrda tlsiktsntr vsprfqnvpn vdnsniektw dptdsrktln
      301 trvsprfqtl pngdnsniek iqnvpdsrkt pntrvsprlq siplekrpfy gssqkrktln
      361 dsqdeimvkk hkvgntklec lsngyvtven gekdvadlqe tgskggnygd dltsihgist
      421 tmavkdklrl fnkyflhfsk aedarcyrvn gsasdheian gkikdkeegc eghvkqakrs
      481 khkgwvtkrp dlkaisemln knevlyhery fgdlpgievg hrfysraemv avglhklllk
      541 ridyigkpyv kseyngytfp laaaivmsgq yeddfgnree ivytgegekd ipgkkrqfsd
      601 qvmrcgnlal knnkkqsvpv rvirghkcdd syskkvyskk vyiydglykv tgywdekgvs
      661 gfkvfkyrlk rlrgqdnlts qnqvhfvrgk vsrvqqelpg lvckdlsngq edkcipvfnf
      721 ynpslaptgf kyinsikvak nvsippdapg cncrgkctnp rscscaqlng gdfpyvsrdg
      781 grlfeakdvv fecgpncgcg pecvnrtsqq glkyqlevyr tkekgwavrs ldfipsgapv
      841 ceyvgilrkn deledisend yifeidcwht mkgiggrevm ylflcqtlwm klmrel
//
LOCUS       XP_016668525             611 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X5 [Gossypium hirsutum].
ACCESSION   XP_016668525
VERSION     XP_016668525.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016813036.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..611
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X5"
                     /calculated_mol_wt=69047
     Region          125..287
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          344..582
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(440..441,534..539,547..549,578..581)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(440..441,535..539,580)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..611
                     /gene="LOC107888804"
                     /coded_by="XM_016813036.2:81..1916"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 milkmrswsk ntkletgskg gnygddltsi hgisttmavk dklrlfnkyf lhfskaedar
       61 cyrvngsasd heiangkikd keegceghvk qakrskhkgw vtkrpdlkai semlnknevl
      121 yheryfgdlp gievghrfys raemvavglh klllkridyi gkpyvkseyn gytfplaaai
      181 vmsgqyeddf gnreeivytg egekdipgkk rqfsdqvmrc gnlalknnkk qsvpvrvirg
      241 hkcddsyskk vyskkvyiyd glykvtgywd ekgvsgfkvf kyrlkrlrgq dnltsqnqvh
      301 fvrgkvsrvq qelpglvckd lsngqedkci pvfnfynpsl aptgfkyins ikvaknvsip
      361 pdapgcncrg kctnprscsc aqlnggdfpy vsrdggrlfe akdvvfecgp ncgcgpecvn
      421 rtsqqglkyq levyrtkekg wavrsldfip sgapvceyvg ilrkndeled isendyifei
      481 dcwhtmkgig grerrlgdvs lpmsnlvdev dertlesepe pefcidassf gnvarfinhs
      541 cdpnlfvqci lsshhdvrla rivlfaaddi prmqeltydy nyaidsvigp dgktkqlpcf
      601 cgtsecrkrl y
//
LOCUS       XP_040944935             499 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944935
VERSION     XP_040944935.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089001.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..499
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X6"
                     /calculated_mol_wt=56423
     Region          13..175
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          232..470
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(328..329,422..427,435..437,466..469)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(328..329,423..427,468)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..499
                     /gene="LOC107888804"
                     /coded_by="XM_041089001.1:411..1910"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 mlnknevlyh eryfgdlpgi evghrfysra emvavglhkl llkridyigk pyvkseyngy
       61 tfplaaaivm sgqyeddfgn reeivytgeg ekdipgkkrq fsdqvmrcgn lalknnkkqs
      121 vpvrvirghk cddsyskkvy skkvyiydgl ykvtgywdek gvsgfkvfky rlkrlrgqdn
      181 ltsqnqvhfv rgkvsrvqqe lpglvckdls ngqedkcipv fnfynpslap tgfkyinsik
      241 vaknvsippd apgcncrgkc tnprscscaq lnggdfpyvs rdggrlfeak dvvfecgpnc
      301 gcgpecvnrt sqqglkyqle vyrtkekgwa vrsldfipsg apvceyvgil rkndeledis
      361 endyifeidc whtmkgiggr errlgdvslp msnlvdevde rtlesepepe fcidassfgn
      421 varfinhscd pnlfvqcils shhdvrlari vlfaaddipr mqeltydyny aidsvigpdg
      481 ktkqlpcfcg tsecrkrly
//
LOCUS       XP_040944936             499 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944936
VERSION     XP_040944936.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089002.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..499
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X6"
                     /calculated_mol_wt=56423
     Region          13..175
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          232..470
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(328..329,422..427,435..437,466..469)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(328..329,423..427,468)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..499
                     /gene="LOC107888804"
                     /coded_by="XM_041089002.1:295..1794"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 mlnknevlyh eryfgdlpgi evghrfysra emvavglhkl llkridyigk pyvkseyngy
       61 tfplaaaivm sgqyeddfgn reeivytgeg ekdipgkkrq fsdqvmrcgn lalknnkkqs
      121 vpvrvirghk cddsyskkvy skkvyiydgl ykvtgywdek gvsgfkvfky rlkrlrgqdn
      181 ltsqnqvhfv rgkvsrvqqe lpglvckdls ngqedkcipv fnfynpslap tgfkyinsik
      241 vaknvsippd apgcncrgkc tnprscscaq lnggdfpyvs rdggrlfeak dvvfecgpnc
      301 gcgpecvnrt sqqglkyqle vyrtkekgwa vrsldfipsg apvceyvgil rkndeledis
      361 endyifeidc whtmkgiggr errlgdvslp msnlvdevde rtlesepepe fcidassfgn
      421 varfinhscd pnlfvqcils shhdvrlari vlfaaddipr mqeltydyny aidsvigpdg
      481 ktkqlpcfcg tsecrkrly
//
LOCUS       XP_040944937             499 aa            linear   PLN 06-AUG-2024
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
            isoform X6 [Gossypium hirsutum].
ACCESSION   XP_040944937
VERSION     XP_040944937.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089003.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..499
                     /product="histone-lysine N-methyltransferase, H3 lysine-9
                     specific SUVH4 isoform X6"
                     /calculated_mol_wt=56423
     Region          13..175
                     /region_name="SAD_SRA"
                     /note="SAD/SRA domain; pfam02182"
                     /db_xref="CDD:460476"
     Region          232..470
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(328..329,422..427,435..437,466..469)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(328..329,423..427,468)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
     CDS             1..499
                     /gene="LOC107888804"
                     /coded_by="XM_041089003.1:114..1613"
                     /db_xref="GeneID:107888804"
ORIGIN      
        1 mlnknevlyh eryfgdlpgi evghrfysra emvavglhkl llkridyigk pyvkseyngy
       61 tfplaaaivm sgqyeddfgn reeivytgeg ekdipgkkrq fsdqvmrcgn lalknnkkqs
      121 vpvrvirghk cddsyskkvy skkvyiydgl ykvtgywdek gvsgfkvfky rlkrlrgqdn
      181 ltsqnqvhfv rgkvsrvqqe lpglvckdls ngqedkcipv fnfynpslap tgfkyinsik
      241 vaknvsippd apgcncrgkc tnprscscaq lnggdfpyvs rdggrlfeak dvvfecgpnc
      301 gcgpecvnrt sqqglkyqle vyrtkekgwa vrsldfipsg apvceyvgil rkndeledis
      361 endyifeidc whtmkgiggr errlgdvslp msnlvdevde rtlesepepe fcidassfgn
      421 varfinhscd pnlfvqcils shhdvrlari vlfaaddipr mqeltydyny aidsvigpdg
      481 ktkqlpcfcg tsecrkrly
//
LOCUS       XP_016692553             303 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1
            [Gossypium hirsutum].
ACCESSION   XP_016692553
VERSION     XP_016692553.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837064.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692553.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 1"
                     /calculated_mol_wt=34055
     Region          51..301
                     /region_name="AtOTU1-like"
                     /note="Arabidopsis thaliana Deubiquitinating enzyme OTU1
                     and similar plant proteins; cd22765"
                     /db_xref="CDD:438602"
     Site            order(52,64..67,69..70,91..93,95,99,176,180,224..226,251)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438602"
     Site            order(96,200,203..206,210,227..231,234,248,262,264,268,
                     292,295,297)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438602"
     CDS             1..303
                     /gene="LOC107909513"
                     /coded_by="XM_016837064.2:246..1157"
                     /db_xref="GeneID:107909513"
ORIGIN      
        1 mqnqdgavad rekesavsip isevddwanf adddimqqqs aihaeeakki pfvgdkepls
       61 mlaaeyesgs pillekikvl dqqyaairrt rgdgncffrs fmfsylehil esqdraevdr
      121 ikgnveecrk tlqslghtdf tfedffslfl eqlecvlqgn edsisqdeli lrsrdqsisd
      181 yvvmffrfvt sgeirkrsef fepfilgltn atveqfckss vepmgeesdh vhitalsdal
      241 gvpirvvyld rsscdiggvs vnhhdflpts gdksnakggs tvpvkpfitl lyrpghydil
      301 ypk
//
LOCUS       XP_016692552             303 aa            linear   PLN 06-AUG-2024
DEFINITION  OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1
            [Gossypium hirsutum].
ACCESSION   XP_016692552
VERSION     XP_016692552.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837063.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692552.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..303
                     /product="OVARIAN TUMOR DOMAIN-containing deubiquitinating
                     enzyme 1"
                     /calculated_mol_wt=34055
     Region          51..301
                     /region_name="AtOTU1-like"
                     /note="Arabidopsis thaliana Deubiquitinating enzyme OTU1
                     and similar plant proteins; cd22765"
                     /db_xref="CDD:438602"
     Site            order(52,64..67,69..70,91..93,95,99,176,180,224..226,251)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438602"
     Site            order(96,200,203..206,210,227..231,234,248,262,264,268,
                     292,295,297)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438602"
     CDS             1..303
                     /gene="LOC107909513"
                     /coded_by="XM_016837063.2:283..1194"
                     /db_xref="GeneID:107909513"
ORIGIN      
        1 mqnqdgavad rekesavsip isevddwanf adddimqqqs aihaeeakki pfvgdkepls
       61 mlaaeyesgs pillekikvl dqqyaairrt rgdgncffrs fmfsylehil esqdraevdr
      121 ikgnveecrk tlqslghtdf tfedffslfl eqlecvlqgn edsisqdeli lrsrdqsisd
      181 yvvmffrfvt sgeirkrsef fepfilgltn atveqfckss vepmgeesdh vhitalsdal
      241 gvpirvvyld rsscdiggvs vnhhdflpts gdksnakggs tvpvkpfitl lyrpghydil
      301 ypk
//
LOCUS       XP_016692549             233 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF113 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016692549
VERSION     XP_016692549.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837060.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..233
                     /product="ethylene-responsive transcription factor ERF113
                     isoform X1"
                     /calculated_mol_wt=26002
     Region          49..107
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(51..52,54,56,58,60,64,66,73,75,78)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..233
                     /gene="LOC107909512"
                     /coded_by="XM_016837060.2:99..800"
                     /db_xref="GeneID:107909512"
ORIGIN      
        1 mtamvtaltq vmgsdeqlsf qqspkpssvq sevknepavq dqentrkrhy rgvrqrpwgk
       61 waaeirdpkk aarvwlgtfd taedaalayd raalkfkgtk aklnfpervq gnrevsyltg
      121 pgdsstvhsa qnptpvvaps swsqdsyphl fqyaqllssg ndadisyyts nlfnfnqeep
      181 fspqfssmsa sstfssqyyh qdltrfstny dsssgpdyph hcgkdfdpst rse
//
LOCUS       XP_016692550             203 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF113 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016692550
VERSION     XP_016692550.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837061.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..203
                     /product="ethylene-responsive transcription factor ERF113
                     isoform X2"
                     /calculated_mol_wt=22934
     Region          19..77
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(21..22,24,26,28,30,34,36,43,45,48)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..203
                     /gene="LOC107909512"
                     /coded_by="XM_016837061.2:615..1226"
                     /db_xref="GeneID:107909512"
ORIGIN      
        1 mylsfffiaf akentrkrhy rgvrqrpwgk waaeirdpkk aarvwlgtfd taedaalayd
       61 raalkfkgtk aklnfpervq gnrevsyltg pgdsstvhsa qnptpvvaps swsqdsyphl
      121 fqyaqllssg ndadisyyts nlfnfnqeep fspqfssmsa sstfssqyyh qdltrfstny
      181 dsssgpdyph hcgkdfdpst rse
//
LOCUS       XP_040944938             202 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF113 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_040944938
VERSION     XP_040944938.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089004.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..202
                     /product="ethylene-responsive transcription factor ERF113
                     isoform X3"
                     /calculated_mol_wt=22673
     Region          18..76
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(20..21,23,25,27,29,33,35,42,44,47)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..202
                     /gene="LOC107909512"
                     /coded_by="XM_041089004.1:80..688"
                     /db_xref="GeneID:107909512"
ORIGIN      
        1 mypaakakpt fqntrkrhyr gvrqrpwgkw aaeirdpkka arvwlgtfdt aedaalaydr
       61 aalkfkgtka klnfpervqg nrevsyltgp gdsstvhsaq nptpvvapss wsqdsyphlf
      121 qyaqllssgn dadisyytsn lfnfnqeepf spqfssmsas stfssqyyhq dltrfstnyd
      181 sssgpdyphh cgkdfdpstr se
//
LOCUS       XP_040944939             221 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At4g14100 [Gossypium hirsutum].
ACCESSION   XP_040944939
VERSION     XP_040944939.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089005.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..221
                     /product="uncharacterized protein At4g14100"
                     /calculated_mol_wt=25397
     CDS             1..221
                     /gene="LOC107909510"
                     /coded_by="XM_041089005.1:367..1032"
                     /db_xref="GeneID:107909510"
ORIGIN      
        1 mafadlnllk plskiilflf lclvliftss lgfckptldk dptptpwplq fhsilvmnys
       61 gilqvidlwy dwpngrnfni iqhqlgnvly dlewnngtsf fytldssktc ssahvevgil
      121 rpnwlegaty lgqqhvdgfl cnvwekvefi wyfedvvtkr pvhwvfytgr eahvmtfevg
      181 avledskwqa pvycfhntta stdstsrrll dgvlkgfkfr v
//
LOCUS       XP_016692539             486 aa            linear   PLN 06-AUG-2024
DEFINITION  sterol 14-demethylase [Gossypium hirsutum].
ACCESSION   XP_016692539
VERSION     XP_016692539.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837050.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692539.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..486
                     /product="sterol 14-demethylase"
                     /calculated_mol_wt=55378
     Region          64..464
                     /region_name="CYP51-like"
                     /note="cytochrome P450 family 51 and similar cytochrome
                     P450s; cd11042"
                     /db_xref="CDD:410668"
     Site            order(106,127,130,137,281,284..285,288..289,292,344,349,
                     353,355,421..423,426..431,434..435)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410668"
     Site            order(106,108..109,113,208,280,283..284,287..288,352,354)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410668"
     CDS             1..486
                     /gene="LOC107909508"
                     /coded_by="XM_016837050.2:444..1904"
                     /db_xref="GeneID:107909508"
ORIGIN      
        1 meaddkflnm gilivatlvv aklisflimp rskrrvppvi kswpviggll rfmkgpivmi
       61 reeypklgsv ftlnlfnkki tfligpevsa hffkasesdl sqqevyqfnv ptfgpgvvfd
      121 vdysirqeqf rfftealrvn klkgyvdqmv teaedyfskw gdsgevdlky elehliilta
      181 srcllgrevr dklfddvsal fhdldngmlp isvifpylpi pahrrrdqar kklaeifani
      241 issrknagky endmlqyfid skykdgrptt eteitgllia alfagqhtss itstwtgayl
      301 lrhkeflsav veeqkklmqk hggnvdhdvl semdtlyrci kealrlhppl imllrsshsd
      361 fsvktrdgke ydipkghiva tspafanrlp hiykdpdtyd pdrfsvgree dkaagafsyi
      421 sfgggrhgcl gepfaylqik aiwshllrnf efelvspfpe idwnamvvgv kgkvmvrykr
      481 rqlsve
//
LOCUS       XP_016692537             412 aa            linear   PLN 06-AUG-2024
DEFINITION  probable beta-1,4-xylosyltransferase IRX10 [Gossypium hirsutum].
ACCESSION   XP_016692537
VERSION     XP_016692537.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837048.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..412
                     /product="probable beta-1,4-xylosyltransferase IRX10"
                     /calculated_mol_wt=46901
     Region          45..340
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     CDS             1..412
                     /gene="LOC107909507"
                     /coded_by="XM_016837048.2:267..1505"
                     /db_xref="GeneID:107909507"
ORIGIN      
        1 mrkwfwgflf iafgfvcsia aernprteri sgsagdvled dpvgrlkvyv yelpskynkk
       61 ilqkdprcls hmfaaeiymh rfllsspvrt lnpeeadwfy tpiyatcdlt ptglplpfks
      121 prmvrsaiql issswpywnr tegadhffvv phdfgacfhy qeekaiergi lpilqratlv
      181 qtfgqrnhvc lnegsitipp yappqkmqar qipldtprsi fvyfrglfyd vnndpeggyy
      241 argaraavwe nfknnplfdi stehpttyye dmqraifclc plgwapwspr lveavvfgci
      301 pviiaddivl pfadaipwee igvfvaeedv pkldtiltsi ppevilrkqr llanpsmkra
      361 mlfpqpalpg dafhqilngl arklphqksi ylkpgekiln wtagpvgdlk pw
//
LOCUS       XP_016692535             644 aa            linear   PLN 06-AUG-2024
DEFINITION  indole-3-acetic acid-amido synthetase GH3.17 [Gossypium hirsutum].
ACCESSION   XP_016692535
VERSION     XP_016692535.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837046.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692535.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..644
                     /product="indole-3-acetic acid-amido synthetase GH3.17"
                     /calculated_mol_wt=73100
     Region          39..643
                     /region_name="GH3"
                     /note="GH3 auxin-responsive promoter; cl21606"
                     /db_xref="CDD:473922"
     CDS             1..644
                     /gene="LOC107909506"
                     /coded_by="XM_016837046.2:115..2049"
                     /db_xref="GeneID:107909506"
ORIGIN      
        1 mracptscta vkqqfstcsr kpkdvnqmtr gnpcqlpgml pnydpndsea gmkiledlte
       61 nveqiqqrvl eeiitrnart dylkgfldge fdkqvfkktv pvvnyedikp yieriangds
      121 sniisaepii elltssgtsg gqpkmmpsta edlhrktffy nllvpvmnky vdgldegkam
      181 yllfvkpetk tpsglmarpv ltsyyksnnf knrpfnrfnv ytspdetilc sdskqsmycq
      241 llcglvqrqe vlrvgavfas aflraikfle hnwkelcsni rtghvsdwit dpgcrkvvsl
      301 vlnkpkpela dliehecnsk swegiikklw prtkyieviv tgsmaqyvst leyysgglpl
      361 vstmyassec yfginfkpls kpwdvsytli pnmayfeflp vkkknedgaq yvqcngvcke
      421 ncmeketeke dvetvelvdv klgqyyelvv ttftglyryr vgdilmvtgf hnkapqfrfv
      481 hrrnvvlsvd tdktseedll kavtkakviv eslgilliey tsyadtssip ghyvlfweit
      541 skgnnhlpvl dhkimeqccs tveesldsvy rrcrrkdnsi gpleirvvqh gtfdalmdfc
      601 vsqgssvnqy ktprciksge ainildsrvv arffsqkapf wepv
//
LOCUS       XP_016690968             272 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor LEP [Gossypium hirsutum].
ACCESSION   XP_016690968
VERSION     XP_016690968.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835479.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690968.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..272
                     /product="ethylene-responsive transcription factor LEP"
                     /calculated_mol_wt=29976
     Region          35..98
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(37..38,40,42,44,46,50,52,59,61,64)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..272
                     /gene="LOC107908241"
                     /coded_by="XM_016835479.2:239..1057"
                     /db_xref="GeneID:107908241"
ORIGIN      
        1 mdfnnskins psssknkrkq qqkqpqqqqq qqearflgvr rrpwgryaae irdpstkerh
       61 wlgtfdtaee aalaydraar smrgskvrtn fvysdmpvgs svtsiispde sqhdmssifp
      121 ihppfhqqtd anqnqlfftq dpfnachfss gwnqessdtl vsytpitgvm daagnggsqq
      181 fsddcelppl ppdvsstcyg sgvdmsytyg swsdtgllgs adgfdsgvsq pffdfssyel
      241 mqhtpvfgki psvpdtvaeg fdlgssssgy ff
//
LOCUS       XP_016692533            1033 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 44 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692533
VERSION     XP_016692533.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837044.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692533.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1033
                     /product="U-box domain-containing protein 44 isoform X1"
                     /calculated_mol_wt=114981
     Region          25..161
                     /region_name="MLKL_NTD"
                     /note="N-terminal domain of mixed lineage kinase
                     domain-like protein (MLKL) and similar proteins; cl41936"
                     /db_xref="CDD:455281"
     Region          263..326
                     /region_name="Ubox"
                     /note="Modified RING finger domain; smart00504"
                     /db_xref="CDD:128780"
     Site            order(266,269,281,283,286,289,301,304)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Site            order(393,399,431,435,439,473,477,481)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          408..441
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          446..482
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <822..>1007
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     CDS             1..1033
                     /gene="LOC107909505"
                     /coded_by="XM_016837044.2:234..3335"
                     /db_xref="GeneID:107909505"
ORIGIN      
        1 mswmdfrigi edvggavlqe lwnrvglqiv dlaketrdvv lekdnfrefs tsiseldtll
       61 qalnvnqiet smgseftkaa leklnsqlrk ahkmikdyks gshlrfilhs hsvlsqmqyl
      121 akdiaaivss felinldmav nlksmntrii ehlssmefrm sastqtiase iknsisrssr
      181 nrksavqlle kiaeavgana daslvknela llkqekheme vqkklaeale lsqlinllys
      241 temvsrplne dtstyhnqyp igsficplcd emmvdpvaii cghsferkai qeyfkrgnyd
      301 cptcrqdlqs qeltpnvnlr ssiqewkkrd mdwkfqaava ginsddpfre nkafddmqdl
      361 veiseyavka aeeglipkfv eslkdtrlns vaaekclycl akycedhklq ivdagavrri
      421 vkrmyngete ansvsillel sktetlieri gntkdcipvl vsllsnpnpd tsskakavlq
      481 nlssnthfav kmaeagyfqs fvarfnqaag qqetqalmae alekmqlken sindlkdkqf
      541 vhnlvhllss nspawksaci kcvkklvpyp kmvkrfvsdp etiplllnli sfrsdpllkq
      601 eaaeilalli eacqppqfqm yqglqelqsq hnvglllqfv akfdcqfkvk flhlllelgn
      661 kskkaqniir sntdavdnlf sclgsdhpsv rkwamklihc vsedhpdgvp vppspgketa
      721 intlasilac spnfeersla agiisqlpkd diaidevlrk setlkaihev icnseeefgv
      781 igastnqdks llenalaall rfteptkpql wrqvgqlelf pslirllstg sslakqrtai
      841 alahlsrsts lsfaetsirl kqensmplls mkklfpnmsw ccsgsadnei lcplhgvacs
      901 qrltfclvka davkpllrtl sdtnsgvaea almaletlle dhstlshsna saaivesegv
      961 vailqvlekg slsaktkald llqkilnhsq isdalfqrce giliqllhed alrkkvalvl
     1021 knmnilpeqs syf
//
LOCUS       XP_040944941             889 aa            linear   PLN 06-AUG-2024
DEFINITION  U-box domain-containing protein 44 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944941
VERSION     XP_040944941.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089007.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..889
                     /product="U-box domain-containing protein 44 isoform X2"
                     /calculated_mol_wt=98684
     Region          119..182
                     /region_name="Ubox"
                     /note="Modified RING finger domain; smart00504"
                     /db_xref="CDD:128780"
     Site            order(122,125,137,139,142,145,157,160)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Site            order(249,255,287,291,295,329,333,337)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          264..297
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          302..338
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <678..>863
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     CDS             1..889
                     /gene="LOC107909505"
                     /coded_by="XM_041089007.1:584..3253"
                     /db_xref="GeneID:107909505"
ORIGIN      
        1 mntriiehls smefrmsast qtiaseikns isrssrnrks avqllekiae avganadasl
       61 vknelallkq ekhemevqkk laealelsql inllystemv srplnedtst yhnqypigsf
      121 icplcdemmv dpvaiicghs ferkaiqeyf krgnydcptc rqdlqsqelt pnvnlrssiq
      181 ewkkrdmdwk fqaavagins ddpfrenkaf ddmqdlveis eyavkaaeeg lipkfveslk
      241 dtrlnsvaae kclyclakyc edhklqivda gavrrivkrm yngeteansv sillelskte
      301 tlierigntk dcipvlvsll snpnpdtssk akavlqnlss nthfavkmae agyfqsfvar
      361 fnqaagqqet qalmaealek mqlkensind lkdkqfvhnl vhllssnspa wksacikcvk
      421 klvpypkmvk rfvsdpetip lllnlisfrs dpllkqeaae ilallieacq ppqfqmyqgl
      481 qelqsqhnvg lllqfvakfd cqfkvkflhl llelgnkskk aqniirsntd avdnlfsclg
      541 sdhpsvrkwa mklihcvsed hpdgvpvpps pgketaintl asilacspnf eerslaagii
      601 sqlpkddiai devlrksetl kaihevicns eeefgvigas tnqdksllen alaallrfte
      661 ptkpqlwrqv gqlelfpsli rllstgssla kqrtaialah lsrstslsfa etsirlkqen
      721 smpllsmkkl fpnmswccsg sadneilcpl hgvacsqrlt fclvkadavk pllrtlsdtn
      781 sgvaeaalma letlledhst lshsnasaai vesegvvail qvlekgslsa ktkaldllqk
      841 ilnhsqisda lfqrcegili qllhedalrk kvalvlknmn ilpeqssyf
//
LOCUS       XP_016690630             125 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690630
VERSION     XP_016690630.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835141.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..125
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14060
     CDS             1..125
                     /gene="LOC107907827"
                     /coded_by="XM_016835141.2:180..557"
                     /db_xref="GeneID:107907827"
ORIGIN      
        1 mafratgywk smitqleirs snrlfasstt qrmkqyttap gdlppnkhwd ympiyivggm
       61 vavaimiaah tekqqlrhcp nvvitkqkra siseldspnq atasgqkfln ksflrkvahi
      121 qepkr
//
LOCUS       XP_016690629             423 aa            linear   PLN 06-AUG-2024
DEFINITION  protein indeterminate-domain 12 [Gossypium hirsutum].
ACCESSION   XP_016690629
VERSION     XP_016690629.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835140.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690629.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..423
                     /product="protein indeterminate-domain 12"
                     /calculated_mol_wt=46616
     Region          69..89
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(74,76,78,80..81,84..85,88,122,124,128..129,132..133,
                     137,150,152,154,156..157,160..161,164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          110..138
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          145..164
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          172..188
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..423
                     /gene="LOC107907826"
                     /coded_by="XM_016835140.2:6..1277"
                     /db_xref="GeneID:107907826"
ORIGIN      
        1 msnfvqdfee dehhstvisq ssnespnpie hpittsskkk rnlpgnpdpd aevvalsprt
       61 lmatnryice vchkgfqrdq nlqlhrrghn lpwklkqrtn tevkkrvyvc pepncvhhhp
      121 sralgdltgi kkhfcrkhge kkwkcdkcsk ryavqsdwka hakicgtrey rcdcgtifsr
      181 kdsfvthraf cdalteenyk vnrnhgaigg silqkqadet msisdntkmn lsignestdn
      241 sqrllslkst givnissnld qifnpttsla stlaigsayt satallqkaa qmgakisdnt
      301 iapillrgft gystsnmnss gsvqdgsnga gtnglyvgee tshnplapta lfdshflqae
      361 ngkaanllgq vymeggqklt vdflgmkptg hqnvdnerny dgnimnlgys naqeglnnlr
      421 anw
//
LOCUS       XP_016690966             220 aa            linear   PLN 06-AUG-2024
DEFINITION  protein vip1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016690966
VERSION     XP_016690966.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835477.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690966.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..220
                     /product="protein vip1 isoform X1"
                     /calculated_mol_wt=23887
     Region          7..207
                     /region_name="PLN03120"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215588"
     CDS             1..220
                     /gene="LOC107908240"
                     /coded_by="XM_016835477.2:168..830"
                     /db_xref="GeneID:107908240"
ORIGIN      
        1 manpdltvvv lnlsptvtlg dlnayfsncg hvekikllsa nrdrslsalv tfrqpyayqt
       61 alllnnanfa gqpirilpkk daadppvsyr tipivteksk hdvqnnktgg nmpglraave
      121 aialegvekl nqardelnhk lkltensrvv mdktrlavca adqaiyaaee aakdvakrik
      181 ntdyvavgat wlsgvlqkts klvlelghrk gcspnsrdri
//
LOCUS       XP_016690967             213 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016690967
VERSION     XP_016690967.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835478.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690967.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..213
                     /product="uncharacterized protein isoform X2"
                     /calculated_mol_wt=23064
     Region          7..200
                     /region_name="PLN03120"
                     /note="nucleic acid binding protein; Provisional"
                     /db_xref="CDD:215588"
     CDS             1..213
                     /gene="LOC107908240"
                     /coded_by="XM_016835478.2:123..764"
                     /db_xref="GeneID:107908240"
ORIGIN      
        1 manpdltvvv lnlsptvtlg dlnayfsncg hvekikllsa nrdrslsalv tfrqpyayqt
       61 alllnnanfa gqpirilpkk daadppvsyr tipivtennk tggnmpglra aveaialegv
      121 eklnqardel nhklkltens rvvmdktrla vcaadqaiya aeeaakdvak rikntdyvav
      181 gatwlsgvlq ktsklvlelg hrkgcspnsr dri
//
LOCUS       XP_040944942             674 aa            linear   PLN 06-AUG-2024
DEFINITION  acyl-coenzyme A oxidase 3, peroxisomal [Gossypium hirsutum].
ACCESSION   XP_040944942
VERSION     XP_040944942.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089008.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..674
                     /product="acyl-coenzyme A oxidase 3, peroxisomal"
                     /calculated_mol_wt=75682
     Region          2..674
                     /region_name="PLN02312"
                     /note="acyl-CoA oxidase"
                     /db_xref="CDD:215178"
     CDS             1..674
                     /gene="LOC107908239"
                     /coded_by="XM_041089008.1:111..2135"
                     /db_xref="GeneID:107908239"
ORIGIN      
        1 mdrafertki ltdhllqssp spvrtslssn acfnytppel sekyafdtke mrrlidghhl
       61 evrdrlfgmm sqsklfnprv rggkvfvspd ynqpmeqqre itlkridylf drgsfkgwlt
      121 eqgeeielrk fasfevfgtf dhsmgtmlav hfflwggavq vfgtkhhhdk wlrdtethvv
      181 kgcfamselg hgsnvrgvet vttydsntqe fvintpcesa qkfwiggaan hathaivfsq
      241 lningsnqgv hafiaqirda dgylcqnvri adcgrkigln gvdngriwfd nvrvprenll
      301 nsvadvsadg kylssindpd qrfaaflapl tigrvsiats tvyiskaglt iairyaltrr
      361 afslkpnepe vllldypsyq rrllpllakt yamsfashyl kklfvkrtpq syktihifss
      421 afkatftwnn lhilqecrea cggqglrten hvgqwkaefd vqstfegdnn ilmqqiskal
      481 laeyvaakkr kkafkglgle hmnkpcpvip sqltstalrs sqfqmdalcl rerdllnrfa
      541 aeishyqakg pskehafnms yqiaedlgra ftdrsifqaf aeaeatlaas slkdvlgmvr
      601 slyglicved asflrygyls venaaavrse mtkvcgelrp halalvssfg ipdaflspia
      661 fnwidansws siqh
//
LOCUS       XP_016692532             169 aa            linear   PLN 06-AUG-2024
DEFINITION  OPA3-like protein [Gossypium hirsutum].
ACCESSION   XP_016692532
VERSION     XP_016692532.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837043.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..169
                     /product="OPA3-like protein"
                     /calculated_mol_wt=18925
     Region          6..125
                     /region_name="OPA3"
                     /note="Optic atrophy 3 protein (OPA3); pfam07047"
                     /db_xref="CDD:462072"
     CDS             1..169
                     /gene="LOC107909504"
                     /coded_by="XM_016837043.2:340..849"
                     /db_xref="GeneID:107909504"
ORIGIN      
        1 milpvvklgt lalktackpi anrlkkdagl hprfrqliin iaqanhrftt tmqrriygha
       61 tdvairplne ekavqaaadl lgelfvftva gaaiifevqr ssrsearkee qrkqeleamk
      121 qkdedvarev elikqkieel eqlvrrrgla dlfnsrhahg aegvkakps
//
LOCUS       XP_016692526             451 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor VOZ1 [Gossypium hirsutum].
ACCESSION   XP_016692526
VERSION     XP_016692526.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837037.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692526.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..451
                     /product="transcription factor VOZ1"
                     /calculated_mol_wt=50234
     Region          <288..373
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..451
                     /gene="LOC107909498"
                     /coded_by="XM_016837037.2:137..1492"
                     /db_xref="GeneID:107909498"
ORIGIN      
        1 mqnnssknkc ssashqqmvd naknrlnflq eqftdlqaar kegragdvav leeqvyqnlr
       61 ewkaelctps passllgslg sfsddinrll qlyeeeddat splkepavlk peiddqslnp
      121 stlpvipedy fvthepqeqs fqgfdlckvs tsanadinyq ldyhpfdlqq dfdhehllda
      181 ngtedyvkda nsnmlpnisp ppsafmgpkc alwdctrpaq gsdwfqdycs sfhatlalne
      241 dppgttpilr pggislkdnl lldavrakaq gknvgipqce gaatmkspwn atelfdlsll
      301 egeiirewlf fdkprrafes gnrkqrslpd ysgrgwhesr kqvmkefagq krsyymdpqp
      361 sgkyewhlfe yeiygcdafa lyrlelklan qkkspkakvp kdsladlqkk mgrltaevpg
      421 ddkppgkgkt kankkaataa aaaanvnsaq d
//
LOCUS       XP_016692527             451 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor VOZ1 [Gossypium hirsutum].
ACCESSION   XP_016692527
VERSION     XP_016692527.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837038.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692527.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..451
                     /product="transcription factor VOZ1"
                     /calculated_mol_wt=50234
     Region          <288..373
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..451
                     /gene="LOC107909498"
                     /coded_by="XM_016837038.2:121..1476"
                     /db_xref="GeneID:107909498"
ORIGIN      
        1 mqnnssknkc ssashqqmvd naknrlnflq eqftdlqaar kegragdvav leeqvyqnlr
       61 ewkaelctps passllgslg sfsddinrll qlyeeeddat splkepavlk peiddqslnp
      121 stlpvipedy fvthepqeqs fqgfdlckvs tsanadinyq ldyhpfdlqq dfdhehllda
      181 ngtedyvkda nsnmlpnisp ppsafmgpkc alwdctrpaq gsdwfqdycs sfhatlalne
      241 dppgttpilr pggislkdnl lldavrakaq gknvgipqce gaatmkspwn atelfdlsll
      301 egeiirewlf fdkprrafes gnrkqrslpd ysgrgwhesr kqvmkefagq krsyymdpqp
      361 sgkyewhlfe yeiygcdafa lyrlelklan qkkspkakvp kdsladlqkk mgrltaevpg
      421 ddkppgkgkt kankkaataa aaaanvnsaq d
//
LOCUS       XP_016692528             451 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor VOZ1 [Gossypium hirsutum].
ACCESSION   XP_016692528
VERSION     XP_016692528.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837039.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692528.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..451
                     /product="transcription factor VOZ1"
                     /calculated_mol_wt=50234
     Region          <288..373
                     /region_name="NAM"
                     /note="No apical meristem (NAM) protein; pfam02365"
                     /db_xref="CDD:460539"
     CDS             1..451
                     /gene="LOC107909498"
                     /coded_by="XM_016837039.2:302..1657"
                     /db_xref="GeneID:107909498"
ORIGIN      
        1 mqnnssknkc ssashqqmvd naknrlnflq eqftdlqaar kegragdvav leeqvyqnlr
       61 ewkaelctps passllgslg sfsddinrll qlyeeeddat splkepavlk peiddqslnp
      121 stlpvipedy fvthepqeqs fqgfdlckvs tsanadinyq ldyhpfdlqq dfdhehllda
      181 ngtedyvkda nsnmlpnisp ppsafmgpkc alwdctrpaq gsdwfqdycs sfhatlalne
      241 dppgttpilr pggislkdnl lldavrakaq gknvgipqce gaatmkspwn atelfdlsll
      301 egeiirewlf fdkprrafes gnrkqrslpd ysgrgwhesr kqvmkefagq krsyymdpqp
      361 sgkyewhlfe yeiygcdafa lyrlelklan qkkspkakvp kdsladlqkk mgrltaevpg
      421 ddkppgkgkt kankkaataa aaaanvnsaq d
//
LOCUS       XP_040944943             210 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944943
VERSION     XP_040944943.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089009.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..210
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22564
     Region          <59..140
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..210
                     /gene="LOC107909501"
                     /coded_by="XM_041089009.1:257..889"
                     /db_xref="GeneID:107909501"
ORIGIN      
        1 martnkytsi nfnhvleknl tpsssssgsn knpqsnhqth ssfasyssag nvkthgrmlv
       61 ltrpspkpis tppvvsptlp qhpqpqprsv lvpdqppssd qislrpgsgt sipglekeek
      121 egvpvsgplk pdrfvpphlr pgfvgreekp epkvlrgreq glkhfgssgh ygedrrpksg
      181 gyekirksae sdlgliphpr ssgnrpsssg
//
LOCUS       XP_040944944             298 aa            linear   PLN 06-AUG-2024
DEFINITION  prohibitin-1, mitochondrial isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944944
VERSION     XP_040944944.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089010.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..298
                     /product="prohibitin-1, mitochondrial isoform X1"
                     /calculated_mol_wt=32995
     Region          47..241
                     /region_name="SPFH_prohibitin"
                     /note="Prohibitin family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03401"
                     /db_xref="CDD:259799"
     CDS             1..298
                     /gene="LOC107909497"
                     /coded_by="XM_041089010.1:957..1853"
                     /db_xref="GeneID:107909497"
ORIGIN      
        1 mfnflalskm nlnnlkvpkm pgggalpall kigvigglgl ygvanslynv dgghraivfn
       61 rilgikdkvy segthlmipw ferpiiydvr arphlvests gsrdlqmvki glrvltrpks
      121 tqlteiyrtl genynervlp siihetlkav vaqynasqli tqrenvsrei rkilteraay
      181 fniqlddvsi tsltfgkeft aaieakqvaa qeaerakfiv ekaeqdkksa viraqgeaks
      241 aqligqaiak npafitlrki easreiaqti ansankvfln skdlllnlqe mdleshpk
//
LOCUS       XP_016692524             289 aa            linear   PLN 06-AUG-2024
DEFINITION  prohibitin-1, mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692524
VERSION     XP_016692524.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837035.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692524.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="prohibitin-1, mitochondrial isoform X2"
                     /calculated_mol_wt=31943
     Region          38..232
                     /region_name="SPFH_prohibitin"
                     /note="Prohibitin family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03401"
                     /db_xref="CDD:259799"
     CDS             1..289
                     /gene="LOC107909497"
                     /coded_by="XM_016837035.2:144..1013"
                     /db_xref="GeneID:107909497"
ORIGIN      
        1 mnlnnlkvpk mpgggalpal lkigvigglg lygvanslyn vdgghraivf nrilgikdkv
       61 ysegthlmip wferpiiydv rarphlvest sgsrdlqmvk iglrvltrpk stqlteiyrt
      121 lgenynervl psiihetlka vvaqynasql itqrenvsre irkilteraa yfniqlddvs
      181 itsltfgkef taaieakqva aqeaerakfi vekaeqdkks aviraqgeak saqligqaia
      241 knpafitlrk ieasreiaqt iansankvfl nskdlllnlq emdleshpk
//
LOCUS       XP_016692523             289 aa            linear   PLN 06-AUG-2024
DEFINITION  prohibitin-1, mitochondrial isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692523
VERSION     XP_016692523.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837034.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692523.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..289
                     /product="prohibitin-1, mitochondrial isoform X2"
                     /calculated_mol_wt=31943
     Region          38..232
                     /region_name="SPFH_prohibitin"
                     /note="Prohibitin family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03401"
                     /db_xref="CDD:259799"
     CDS             1..289
                     /gene="LOC107909497"
                     /coded_by="XM_016837034.2:167..1036"
                     /db_xref="GeneID:107909497"
ORIGIN      
        1 mnlnnlkvpk mpgggalpal lkigvigglg lygvanslyn vdgghraivf nrilgikdkv
       61 ysegthlmip wferpiiydv rarphlvest sgsrdlqmvk iglrvltrpk stqlteiyrt
      121 lgenynervl psiihetlka vvaqynasql itqrenvsre irkilteraa yfniqlddvs
      181 itsltfgkef taaieakqva aqeaerakfi vekaeqdkks aviraqgeak saqligqaia
      241 knpafitlrk ieasreiaqt iansankvfl nskdlllnlq emdleshpk
//
LOCUS       XP_016692522             140 aa            linear   PLN 06-AUG-2024
DEFINITION  glutaredoxin-C9 [Gossypium hirsutum].
ACCESSION   XP_016692522
VERSION     XP_016692522.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837033.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..140
                     /product="glutaredoxin-C9"
                     /calculated_mol_wt=14948
     Region          37..140
                     /region_name="GlrX-like_plant"
                     /note="Glutaredoxin-like family; TIGR02189"
                     /db_xref="CDD:274023"
     CDS             1..140
                     /gene="LOC107909496"
                     /coded_by="XM_016837033.2:254..676"
                     /db_xref="GeneID:107909496"
ORIGIN      
        1 mqqaipyksw plpcidatsh rarstttlgh ngrgkdvlni vsenavivla rkgccmshvv
       61 rrllltlgvn pavheideed eagvlnelgt ickgtennkm vqlpavfigg rlfggldkvm
      121 athisgdlip vlkdagalwl
//
LOCUS       XP_016692521             462 aa            linear   PLN 06-AUG-2024
DEFINITION  zinc finger protein NUTCRACKER [Gossypium hirsutum].
ACCESSION   XP_016692521
VERSION     XP_016692521.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837032.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..462
                     /product="zinc finger protein NUTCRACKER"
                     /calculated_mol_wt=51168
     Region          60..80
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(65,67,69,71..72,75..76,79,113,115,119..120,123..124,
                     128,141,143,145,147..148,151..152,155)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          101..129
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          136..155
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          163..179
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..462
                     /gene="LOC107909495"
                     /coded_by="XM_016837032.2:287..1675"
                     /db_xref="GeneID:107909495"
ORIGIN      
        1 mletmaeepv sngfmqnpvp gsnnppvakr krnlpgtpdp eaevialspk tlmatnrflc
       61 eicgkgfqrd qnlqlhrrgh nlpwklkqrt tkevrkrvyv cpektcvhhh psralgdltg
      121 ikkhfyrkhg ekkwkcekcs kryavqsdwk ahsktcgtre ykcdcgtlfs rrdsfithra
      181 fcdalaeeta rvnaassmhs lattnfsyql mgnpldtgmp qhfpsifkti ssndetidqt
      241 rrgfslwmgq apqghdsigk slqeiqqfgs lnsgsmysdp lvstsnppas dyqlnwvfgn
      301 kvssgnaedq ltstslplnn nakengtqlv sipslfstqh qsqqtpsfsm satallqkaa
      361 qigatstdts flgsfgtkcs nsqiqdgsky sdlyvsntqt ttlgrdmenm andistlnql
      421 qmypakrryl qneesgggqt rdflgvgvqq aichpssing wi
//
LOCUS       XP_016692520             229 aa            linear   PLN 06-AUG-2024
DEFINITION  putative methyltransferase-like protein 21E pseudogene [Gossypium
            hirsutum].
ACCESSION   XP_016692520
VERSION     XP_016692520.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837031.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..229
                     /product="putative methyltransferase-like protein 21E
                     pseudogene"
                     /calculated_mol_wt=25775
     Region          15..195
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(76..82,99..100,124..126,148)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..229
                     /gene="LOC107909494"
                     /coded_by="XM_016837031.2:221..910"
                     /db_xref="GeneID:107909494"
ORIGIN      
        1 mkftdspviq lqvrdsqlsi qqdngsfhvg tsvwpcslvl akfverwaps spttttdnpy
       61 ydlldfhtrr rraielgtgc gaagmafhll glqdiiltdi spvmpalkhn lkrnkpvlgk
      121 nmktsilywn nkdqirgvnp pfdvviaadv vyieesvghl vgamealvsd dgvillgyql
      181 rspeadklfw emcekvfvie kvphqdlhpd yayeetdvyv frkkknnnn
//
LOCUS       XP_016692519             988 aa            linear   PLN 06-AUG-2024
DEFINITION  receptor-like protein kinase HSL1 [Gossypium hirsutum].
ACCESSION   XP_016692519
VERSION     XP_016692519.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016837030.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..988
                     /product="receptor-like protein kinase HSL1"
                     /calculated_mol_wt=108649
     Region          26..957
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          65..88
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          185..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          210..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..281
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          329..352
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          353..376
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          377..400
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          401..448
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          425..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          449..472
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          473..496
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          497..520
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          521..542
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          545..567
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..988
                     /gene="LOC107909493"
                     /coded_by="XM_016837030.2:388..3354"
                     /db_xref="GeneID:107909493"
ORIGIN      
        1 mflvflllfl nplpyafaln qeglyllqvr qslsdptnal sswnrrddtp cnwqgischs
       61 ptsrvqsvdl sdfqlvgpfp lflcrlpylr sislannsin sslpldistc qnlttldlsq
      121 nllvgslpls lpniptlenl ilygnnfsge ipatfgqfqr lrclnlagnl ldatipailg
      181 nistlkeldl aynpfspshi pselgnltnl eqlflagcnl vgqipssfgr lvslrnldfs
      241 lnqlsgsips sisqlksieq ielynnslsg elplnmgnlt tlkrfdaamn eltgtiptgl
      301 cglqleslnl ynnrlegtlp esitvskklq elklfnnkls gplpsqlgvn splqsldvsy
      361 nqfsgeipen lcakgqlgdi ilifnsfsge ipeslgkcqs lgrvrfkhnr fsgrvpdgfw
      421 glprvfllel aensfsgeis ksissahnls ilsisnnrfs gslpdeigsl etlvemsasg
      481 neftghipls lvklkqlvrl dlseneidgr ipegikecms lnelnlannr lsgsipgdig
      541 slpvlnyldl ssnsfsgkvp ielqnlklnv fnlsnnqlsg elppfyaken yknsflgnpg
      601 lcgdleglcp kisrsknqtn mwilrsifvl aglvfvvgvv wffmkyrsfk knkkratvtk
      661 wrsfhkigfs eyeiadclke envigsggsg kvykvvlsng davavkklsg vkkedslsaa
      721 dmerdefete vemlgkirhk nivrlwccci tgddkllvye ympngslgdl lhsskgglld
      781 wptrykiald aaeglsylhh dcvppivhrd vksnnilldh efgarvadfg vakivkgvgk
      841 gaesmsviag scgyiapeya ytlrvneksd iysfgvvile lvtgkpptdp efgekdmvkw
      901 vcatynqkgv dqvidprlds tykeeicrvl digilctdal pinrlsmrkv vkllqeagge
      961 nklkanqdgn lspyycyyee asdqaslv
//
LOCUS       XP_016692224             452 aa            linear   PLN 06-AUG-2024
DEFINITION  DDB1- and CUL4-associated factor 13 [Gossypium hirsutum].
ACCESSION   XP_016692224
VERSION     XP_016692224.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836735.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..452
                     /product="DDB1- and CUL4-associated factor 13"
                     /calculated_mol_wt=51532
     Region          <64..362
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          69..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          113..161
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          166..200
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          207..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          249..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          292..334
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          335..359
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          361..447
                     /region_name="Sof1"
                     /note="Sof1-like domain; pfam04158"
                     /db_xref="CDD:427753"
     CDS             1..452
                     /gene="LOC107909268"
                     /coded_by="XM_016836735.2:161..1519"
                     /db_xref="GeneID:107909268"
ORIGIN      
        1 mkvkvisrst deftrersqd lqrvfrnfdp slrsqekave yvralnaakl dkifarpfig
       61 amdghrdsik cmaknpnylk aifsgsddgd irlwdlasrr tlcqfpghqg avqgltvstd
      121 gsilvscgsd ctvrlwnvpd anladsdnls dnsakpvavy vwknafravd hqwdgdlfat
      181 agaqvdiwnh nrsqpvntfd wgadttisvr fnpgepnila tsandrsitl ydlrmsspar
      241 kvimrtktns iawnpmepmn ftaanedcnc ysydarklee akcvhkdhvs avmdidfspt
      301 grefvtgsyd rtvrifqyng ghsreiyhtk rmqrvfcvky scdasyvisg sddtnlrlwk
      361 akaseqlgvv lprerkkhey leavknrykh lpevkrivrh rhlprpvyka anlrrtmiea
      421 errkeqrrka hsapgsivte pvrkrriike ve
//
LOCUS       XP_016692227             440 aa            linear   PLN 06-AUG-2024
DEFINITION  reticulon-like protein B18 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692227
VERSION     XP_016692227.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836738.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692227.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..440
                     /product="reticulon-like protein B18 isoform X1"
                     /calculated_mol_wt=49018
     Region          203..355
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..440
                     /gene="LOC107909269"
                     /coded_by="XM_016836738.2:189..1511"
                     /db_xref="GeneID:107909269"
ORIGIN      
        1 mepsstppsh rsnpishtks asrlarigys vvesgeqerp tiphlsldhi spspkklttp
       61 aspsplslrs stnslplqel lllspasplr rsrtrladrl emaeevgaae lgggsrrkck
      121 srasqtgvlg cgtprnsrrs rrrmemelre drdlvlgeem gkprkrrhsg kskkeklslv
      181 palpsskadd cekcnldrmg emisdlvmwr dvaksslwfg fgclcflssc ftkgvtfsif
      241 svishigllf lgvsffsnsi yqnvdkmnef klkeedflrl aklilpatnf aiskmrklfs
      301 gepsmtlkva pllllgaeyg hiitlrrlca fgffisfsvp klysryagli nkkaeymkew
      361 gmetwgacsh kklvaasaat afwnlssikt riftafitmv iirycrqhlv qdsveveaee
      421 veqelsqkal vvageeskkn
//
LOCUS       XP_016692229             431 aa            linear   PLN 06-AUG-2024
DEFINITION  reticulon-like protein B18 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692229
VERSION     XP_016692229.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836740.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692229.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..431
                     /product="reticulon-like protein B18 isoform X2"
                     /calculated_mol_wt=48166
     Region          194..346
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..431
                     /gene="LOC107909269"
                     /coded_by="XM_016836740.2:191..1486"
                     /db_xref="GeneID:107909269"
ORIGIN      
        1 mepsstppsh rsnpishtks asrlarigys vvesgeqerp tiphlsldhi spspkklttp
       61 aspsplslrs stnslplqel lllspasplr rsrtrladrl emaeevgaae lgggsrrkck
      121 srasqtgvlg cgtprnsrrs rrrmemelre drdlvlgeem gkprkrrhsg kskkeklkad
      181 dcekcnldrm gemisdlvmw rdvaksslwf gfgclcflss cftkgvtfsi fsvishigll
      241 flgvsffsns iyqnvdkmne fklkeedflr laklilpatn faiskmrklf sgepsmtlkv
      301 apllllgaey ghiitlrrlc afgffisfsv pklysryagl inkkaeymke wgmetwgacs
      361 hkklvaasaa tafwnlssik triftafitm viirycrqhl vqdsveveae eveqelsqka
      421 lvvageeskk n
//
LOCUS       XP_016692230             256 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear cap-binding protein subunit 2 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692230
VERSION     XP_016692230.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836741.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..256
                     /product="nuclear cap-binding protein subunit 2 isoform
                     X1"
                     /calculated_mol_wt=29375
     Region          36..113
                     /region_name="RRM_NCBP2"
                     /note="RNA recognition motif (RRM) found in nuclear
                     cap-binding protein subunit 2 (CBP20) and similar
                     proteins; cd12240"
                     /db_xref="CDD:409686"
     Site            order(37,77,79,106,108..110)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:409686"
     Site            order(44,47..49,51..53,56..57,59,61,63,83,90,93..94,
                     96..99,101..102)
                     /site_type="other"
                     /note="subunit interface [polypeptide binding]"
                     /db_xref="CDD:409686"
     CDS             1..256
                     /gene="LOC107909270"
                     /coded_by="XM_016836741.2:145..915"
                     /db_xref="GeneID:107909270"
ORIGIN      
        1 maslfkdpak lsayrdrrfn gsqeefeqal lnsttvyign msfytteeqv yelfsragei
       61 kkiimgldkn sktpcgfcfv lyysredaed avkyisgtil ddrpirvdfd wgfvegrqwg
      121 rgrsggqvrd eyrtdydpgr ggygklvqke leaqrqlvdy gagslgsfpp vmaphygrhg
      181 ggrghggsyr hgrgityyhr krhrdddhya resskrnsdh esrrasdhda rpeknprfre
      241 sgdsdeeeed drkrrs
//
LOCUS       XP_016692231             253 aa            linear   PLN 06-AUG-2024
DEFINITION  nuclear cap-binding protein subunit 2 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692231
VERSION     XP_016692231.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836742.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="nuclear cap-binding protein subunit 2 isoform
                     X2"
                     /calculated_mol_wt=29056
     Region          36..113
                     /region_name="RRM_NCBP2"
                     /note="RNA recognition motif (RRM) found in nuclear
                     cap-binding protein subunit 2 (CBP20) and similar
                     proteins; cd12240"
                     /db_xref="CDD:409686"
     Site            order(37,77,79,106,108..110)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:409686"
     Site            order(44,47..49,51..53,56..57,59,61,63,83,90,93..94,
                     96..99,101..102)
                     /site_type="other"
                     /note="subunit interface [polypeptide binding]"
                     /db_xref="CDD:409686"
     CDS             1..253
                     /gene="LOC107909270"
                     /coded_by="XM_016836742.2:144..905"
                     /db_xref="GeneID:107909270"
ORIGIN      
        1 maslfkdpak lsayrdrrfn gsqeefeqal lnsttvyign msfytteeqv yelfsragei
       61 kkiimgldkn sktpcgfcfv lyysredaed avkyisgtil ddrpirvdfd wgfvegrqwg
      121 rgrsggqvrd eyrtdydpgr ggygklvqke leaqrqlvdy gagslgsfpp vmaphygrhg
      181 ggrghggsyr hgrdyhrkrh rdddhyares skrnsdhesr rasdhdarpe knprfresgd
      241 sdeeeeddrk rrs
//
LOCUS       XP_016692232             111 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016692232
VERSION     XP_016692232.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836743.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..111
                     /product="protein NUCLEAR FUSION DEFECTIVE 6,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=11707
     CDS             1..111
                     /gene="LOC107909271"
                     /coded_by="XM_016836743.2:148..483"
                     /db_xref="GeneID:107909271"
ORIGIN      
        1 masigaaara vlrsssarna aarlapqska apsqfrvssr iplsncicrc pveasfcles
       61 mlpyhsatas almtsmltis rqsyvwlseg ktktsltvlt qflllravis a
//
LOCUS       XP_016692233              95 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016692233
VERSION     XP_016692233.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836744.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..95
                     /product="protein NUCLEAR FUSION DEFECTIVE 6,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=9982
     CDS             1..95
                     /gene="LOC107909271"
                     /coded_by="XM_016836744.2:180..467"
                     /db_xref="GeneID:107909271"
ORIGIN      
        1 masigaaara vlrsssarna aarlapqska apsqfrvssr iplsncicrc pveasfcles
       61 mlpyhsatas almtsmltis rqsyvwlsea cnddv
//
LOCUS       XP_016692234              91 aa            linear   PLN 06-AUG-2024
DEFINITION  protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016692234
VERSION     XP_016692234.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836745.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..91
                     /product="protein NUCLEAR FUSION DEFECTIVE 6,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=9534
     CDS             1..91
                     /gene="LOC107909271"
                     /coded_by="XM_016836745.2:168..443"
                     /db_xref="GeneID:107909271"
ORIGIN      
        1 masigaaara vlrsssarna aarlapqska apsqfrvssr iplsncicrc pveasfcles
       61 mlpyhsatas almtsmltis rqsyvwlseg l
//
LOCUS       XP_040944945             418 aa            linear   PLN 06-AUG-2024
DEFINITION  tyrosine aminotransferase [Gossypium hirsutum].
ACCESSION   XP_040944945
VERSION     XP_040944945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089011.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..418
                     /product="tyrosine aminotransferase"
                     /calculated_mol_wt=46046
     Region          5..417
                     /region_name="PLN00145"
                     /note="tyrosine/nicotianamine aminotransferase;
                     Provisional"
                     /db_xref="CDD:215074"
     CDS             1..418
                     /gene="LOC107909272"
                     /coded_by="XM_041089011.1:2391..3647"
                     /db_xref="GeneID:107909272"
ORIGIN      
        1 mesgakkwgf qgkqgleaas tttvrgylnl lmgninqdnc ltvvplghgd pshfpsfrit
       61 paaedaivda lrsakhncys ttggilparr aladylnrdl pyhlspddvy ltigctqgie
      121 vvisilsrpg anillprpgf plyeawcayn hlemrhydll pekgwevdld avetladent
      181 vamviinpgn pcgnvfgyeh lkkiaetark lgilviadea ydniafgstp yvpmrvfglt
      241 vpiltlgsis krwvvpgwrl gwlvtsdpdg ilqksgvins iagflnissd patfiqaaip
      301 qilentkedf fskiistlre cadicynrie eipsltcpkk pegsmfvmlk lnlsmledin
      361 ddvdfclkla keesviilpg iamelknwlr vtfaiepsll qeglarvkaf cqrhakkq
//
LOCUS       XP_040944946             418 aa            linear   PLN 06-AUG-2024
DEFINITION  tyrosine aminotransferase [Gossypium hirsutum].
ACCESSION   XP_040944946
VERSION     XP_040944946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089012.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..418
                     /product="tyrosine aminotransferase"
                     /calculated_mol_wt=46046
     Region          5..417
                     /region_name="PLN00145"
                     /note="tyrosine/nicotianamine aminotransferase;
                     Provisional"
                     /db_xref="CDD:215074"
     CDS             1..418
                     /gene="LOC107909272"
                     /coded_by="XM_041089012.1:2180..3436"
                     /db_xref="GeneID:107909272"
ORIGIN      
        1 mesgakkwgf qgkqgleaas tttvrgylnl lmgninqdnc ltvvplghgd pshfpsfrit
       61 paaedaivda lrsakhncys ttggilparr aladylnrdl pyhlspddvy ltigctqgie
      121 vvisilsrpg anillprpgf plyeawcayn hlemrhydll pekgwevdld avetladent
      181 vamviinpgn pcgnvfgyeh lkkiaetark lgilviadea ydniafgstp yvpmrvfglt
      241 vpiltlgsis krwvvpgwrl gwlvtsdpdg ilqksgvins iagflnissd patfiqaaip
      301 qilentkedf fskiistlre cadicynrie eipsltcpkk pegsmfvmlk lnlsmledin
      361 ddvdfclkla keesviilpg iamelknwlr vtfaiepsll qeglarvkaf cqrhakkq
//
LOCUS       XP_016692237             222 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor 9 [Gossypium hirsutum].
ACCESSION   XP_016692237
VERSION     XP_016692237.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836748.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..222
                     /product="ethylene-responsive transcription factor 9"
                     /calculated_mol_wt=23383
     Region          27..88
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(29..30,32,34,36,38,42,44,51,53,56)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..222
                     /gene="LOC107909277"
                     /coded_by="XM_016836748.2:481..1149"
                     /db_xref="GeneID:107909277"
ORIGIN      
        1 mapqdknask tlkkangtgs tssqevhfrg vrkrpwgrya aeirdpgkks rvwlgtfdta
       61 eeaaraydaa arefrgpkak tnfplpdetn cykgqnqqsp sqsstveesg sptvergvnt
      121 lsgavgrfpf achqqlalgg gvanggisgv trsrpvlffe alggagvvgq vypvrfdpvg
      181 vqlgmgfasv vrsepdsssa ihckarrpgl aldlnlpppv da
//
LOCUS       XP_016692238             269 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TPX2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692238
VERSION     XP_016692238.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836749.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..269
                     /product="protein TPX2 isoform X1"
                     /calculated_mol_wt=31710
     Region          120..196
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..269
                     /gene="LOC107909278"
                     /coded_by="XM_016836749.2:46..855"
                     /db_xref="GeneID:107909278"
ORIGIN      
        1 milfqerave kerkfvieii ekqfqeerar vpkanpypyt tdypvvppkp epkhctkpep
       61 fqlvslvrhe eemqremeer lrkekeeaem rifkaqpilk edpipapekv rkpltqvqef
      121 slhvnhrave raefdqkike kemmykryre eseaarmiee ekavkqlrrt mvpharpvpk
      181 fdnpfcpqks skettkprsp hlrvvqrker rkimstlsta tsspatsmrs skettkprsp
      241 hlrvvqrker rkimstlsta tsspatsmr
//
LOCUS       XP_016692240             229 aa            linear   PLN 06-AUG-2024
DEFINITION  protein TPX2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692240
VERSION     XP_016692240.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836751.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..229
                     /product="protein TPX2 isoform X2"
                     /calculated_mol_wt=27200
     Region          120..196
                     /region_name="TPX2"
                     /note="Targeting protein for Xklp2 (TPX2) domain;
                     pfam06886"
                     /db_xref="CDD:462029"
     CDS             1..229
                     /gene="LOC107909278"
                     /coded_by="XM_016836751.2:45..734"
                     /db_xref="GeneID:107909278"
ORIGIN      
        1 milfqerave kerkfvieii ekqfqeerar vpkanpypyt tdypvvppkp epkhctkpep
       61 fqlvslvrhe eemqremeer lrkekeeaem rifkaqpilk edpipapekv rkpltqvqef
      121 slhvnhrave raefdqkike kemmykryre eseaarmiee ekavkqlrrt mvpharpvpk
      181 fdnpfcpqks skettkprsp hlrvvqrker rkimstlsta tsspatsmr
//
LOCUS       XP_016692241             577 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane E3 ubiquitin-protein ligase FLY2 isoform X1
            [Gossypium hirsutum].
ACCESSION   XP_016692241
VERSION     XP_016692241.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836752.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..577
                     /product="transmembrane E3 ubiquitin-protein ligase FLY2
                     isoform X1"
                     /calculated_mol_wt=66809
     Region          521..575
                     /region_name="RING-H2_TUL1-like"
                     /note="RING finger, H2 subclass, found in Saccharomyces
                     cerevisiae transmembrane E3 ubiquitin-protein ligase 1
                     (TUL1) and similar proteins; cd23117"
                     /db_xref="CDD:438479"
     CDS             1..577
                     /gene="LOC107909279"
                     /coded_by="XM_016836752.2:476..2209"
                     /db_xref="GeneID:107909279"
ORIGIN      
        1 mgcrgfdmit reyldflwns rrrrlgfvfr vvfglwfgfv mlkpvaglrp irerarswgd
       61 ewlfvrkdes elgpfhawni tgtyrgswkf leslnssskf pdfrksagds vielvstptk
      121 itgvhyvqgv iifhdvfdnk hnvggaqirv egvyiwpfrq lrmvansgke gelsqeedyi
      181 lsnpyhllgv fssqvfqesp rdkiwrrkns piyemekrcn ieiaaqisri sssqndgdhd
      241 ryhieglmes ptvdddgdcf splllnatsv nievyynkav nytlmvtfvs flqvlllirq
      301 mehsntqsga akvsiltigq qaimdaylcl lhltagilve slfnafataa ffkfvvfsif
      361 emryllaiwk asrpmnngeg wetmrrelsv lysrfygill ggilvmyefh nflqpillll
      421 ysfwipqiit nvirdsrkpl hphyilgmti trlaiplyif gcphnfmrie pdkswciclv
      481 vfiglqasil llqhylgsrw fiprqilpek ysyyrrfdpe anhaidcvic mtsidltqrs
      541 rdcmvtpcdh ffhsgclqrw mdikmecptc rrslpta
//
LOCUS       XP_016692242             570 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane E3 ubiquitin-protein ligase FLY2 isoform X2
            [Gossypium hirsutum].
ACCESSION   XP_016692242
VERSION     XP_016692242.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836753.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..570
                     /product="transmembrane E3 ubiquitin-protein ligase FLY2
                     isoform X2"
                     /calculated_mol_wt=65919
     Region          514..568
                     /region_name="RING-H2_TUL1-like"
                     /note="RING finger, H2 subclass, found in Saccharomyces
                     cerevisiae transmembrane E3 ubiquitin-protein ligase 1
                     (TUL1) and similar proteins; cd23117"
                     /db_xref="CDD:438479"
     CDS             1..570
                     /gene="LOC107909279"
                     /coded_by="XM_016836753.2:262..1974"
                     /db_xref="GeneID:107909279"
ORIGIN      
        1 mcsgeyldfl wnsrrrrlgf vfrvvfglwf gfvmlkpvag lrpirerars wgdewlfvrk
       61 deselgpfha wnitgtyrgs wkfleslnss skfpdfrksa gdsvielvst ptkitgvhyv
      121 qgviifhdvf dnkhnvggaq irvegvyiwp frqlrmvans gkegelsqee dyilsnpyhl
      181 lgvfssqvfq esprdkiwrr knspiyemek rcnieiaaqi srisssqndg dhdryhiegl
      241 mesptvdddg dcfsplllna tsvnievyyn kavnytlmvt fvsflqvlll irqmehsntq
      301 sgaakvsilt igqqaimday lcllhltagi lveslfnafa taaffkfvvf sifemrylla
      361 iwkasrpmnn gegwetmrre lsvlysrfyg illggilvmy efhnflqpil lllysfwipq
      421 iitnvirdsr kplhphyilg mtitrlaipl yifgcphnfm riepdkswci clvvfiglqa
      481 silllqhylg srwfiprqil pekysyyrrf dpeanhaidc vicmtsidlt qrsrdcmvtp
      541 cdhffhsgcl qrwmdikmec ptcrrslpta
//
LOCUS       XP_016692243             567 aa            linear   PLN 06-AUG-2024
DEFINITION  transmembrane E3 ubiquitin-protein ligase FLY2 isoform X3
            [Gossypium hirsutum].
ACCESSION   XP_016692243
VERSION     XP_016692243.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836754.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..567
                     /product="transmembrane E3 ubiquitin-protein ligase FLY2
                     isoform X3"
                     /calculated_mol_wt=65671
     Region          511..565
                     /region_name="RING-H2_TUL1-like"
                     /note="RING finger, H2 subclass, found in Saccharomyces
                     cerevisiae transmembrane E3 ubiquitin-protein ligase 1
                     (TUL1) and similar proteins; cd23117"
                     /db_xref="CDD:438479"
     CDS             1..567
                     /gene="LOC107909279"
                     /coded_by="XM_016836754.2:18..1721"
                     /db_xref="GeneID:107909279"
ORIGIN      
        1 meyldflwns rrrrlgfvfr vvfglwfgfv mlkpvaglrp irerarswgd ewlfvrkdes
       61 elgpfhawni tgtyrgswkf leslnssskf pdfrksagds vielvstptk itgvhyvqgv
      121 iifhdvfdnk hnvggaqirv egvyiwpfrq lrmvansgke gelsqeedyi lsnpyhllgv
      181 fssqvfqesp rdkiwrrkns piyemekrcn ieiaaqisri sssqndgdhd ryhieglmes
      241 ptvdddgdcf splllnatsv nievyynkav nytlmvtfvs flqvlllirq mehsntqsga
      301 akvsiltigq qaimdaylcl lhltagilve slfnafataa ffkfvvfsif emryllaiwk
      361 asrpmnngeg wetmrrelsv lysrfygill ggilvmyefh nflqpillll ysfwipqiit
      421 nvirdsrkpl hphyilgmti trlaiplyif gcphnfmrie pdkswciclv vfiglqasil
      481 llqhylgsrw fiprqilpek ysyyrrfdpe anhaidcvic mtsidltqrs rdcmvtpcdh
      541 ffhsgclqrw mdikmecptc rrslpta
//
LOCUS       XP_016692245             219 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_016692245
VERSION     XP_016692245.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836756.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..219
                     /product="early nodulin-like protein 2"
                     /calculated_mol_wt=24159
     Region          25..125
                     /region_name="OsENODL1_like"
                     /note="Early nodulin-like protein (OsENODL1) and similar
                     proteins; cd11019"
                     /db_xref="CDD:259905"
     CDS             1..219
                     /gene="LOC107909282"
                     /coded_by="XM_016836756.2:276..935"
                     /db_xref="GeneID:107909282"
ORIGIN      
        1 mgferylasv livimlsfit ssqgykfyvg grdgwvvsps enynhwaern rfqvndtlff
       61 kykkgsdsvl lvtredyfsc ntknpiqslt egdslftfdr sgpfffitgn adnckkgqkl
      121 ivvvmavrhk pqqqppspsp ssavttapvs pptlpipetn ppvespksse apshdavepa
      181 ppehrsgsfk lvcstwlvlg fgiwvsmalg ienvvcfwc
//
LOCUS       XP_040944948             219 aa            linear   PLN 06-AUG-2024
DEFINITION  early nodulin-like protein 2 [Gossypium hirsutum].
ACCESSION   XP_040944948
VERSION     XP_040944948.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089014.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..219
                     /product="early nodulin-like protein 2"
                     /calculated_mol_wt=24159
     Region          25..125
                     /region_name="OsENODL1_like"
                     /note="Early nodulin-like protein (OsENODL1) and similar
                     proteins; cd11019"
                     /db_xref="CDD:259905"
     CDS             1..219
                     /gene="LOC107909282"
                     /coded_by="XM_041089014.1:159..818"
                     /db_xref="GeneID:107909282"
ORIGIN      
        1 mgferylasv livimlsfit ssqgykfyvg grdgwvvsps enynhwaern rfqvndtlff
       61 kykkgsdsvl lvtredyfsc ntknpiqslt egdslftfdr sgpfffitgn adnckkgqkl
      121 ivvvmavrhk pqqqppspsp ssavttapvs pptlpipetn ppvespksse apshdavepa
      181 ppehrsgsfk lvcstwlvlg fgiwvsmalg ienvvcfwc
//
LOCUS       XP_016692246             708 aa            linear   PLN 06-AUG-2024
DEFINITION  putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Gossypium hirsutum].
ACCESSION   XP_016692246
VERSION     XP_016692246.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836757.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692246.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..708
                     /product="putative RNA polymerase II subunit B1 CTD
                     phosphatase RPAP2 homolog"
                     /calculated_mol_wt=77537
     Region          42..115
                     /region_name="RPAP2_Rtr1"
                     /note="Rtr1/RPAP2 family; pfam04181"
                     /db_xref="CDD:461212"
     CDS             1..708
                     /gene="LOC107909283"
                     /coded_by="XM_016836757.2:101..2227"
                     /db_xref="GeneID:107909283"
ORIGIN      
        1 mnkgsssmak dqsisvseav hkiqlhlldg irvekqliss gslisrsdye dvvtersiss
       61 tcgyplcqnp lpseprrrgr yrislkehrv ydlqetsrfc sadclinsra fagslqeerc
      121 svlnhaklna ilslfddvdl ndedlgkngd lgfsnlkike neeikagevs svgpsnaieg
      181 yvpqrelvsk psssknskng vfdssssklg dikgdyfvnn eidftsavim nneyldftsa
      241 vimnneytts knpgslrqsq rtkpcsmkdv inemdftsei imndeytvsk tppgsrqgss
      301 gsklkktegk gvckdfeekc mrsesssalt kedsgivemp stkcvdqsgl dtinaeaeke
      361 thsdkavass evvlksslks agakklnrsv twadkknvdg arkgslcevk emdaqkgdse
      421 nlgraedgdd ddnrlrfasa eacamalsea aaavasgdsd vndavseagl iilphplead
      481 eeekvenidt leaepepeeg pvkwptkpgi prsdffdped swfdappegf sltlstfatm
      541 wnalfewits sslayiygrd etfheeylsv ngreypqkiv lrdgrsseik etlagcisra
      601 lpaivtalrl pipistleqg mgrlldtmsf vealpafrmk qwqvivllli dalsvcripa
      661 ltphmtngrm llhkvldgaq ismeeyevmk dliiplgrap hfsaqsga
//
LOCUS       XP_016692247             702 aa            linear   PLN 06-AUG-2024
DEFINITION  probable serine/threonine-protein kinase At1g54610 [Gossypium
            hirsutum].
ACCESSION   XP_016692247
VERSION     XP_016692247.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836758.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692247.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..702
                     /product="probable serine/threonine-protein kinase
                     At1g54610"
                     /calculated_mol_wt=78033
     Region          146..430
                     /region_name="STKc_CDK9_like"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; cd07840"
                     /db_xref="CDD:270832"
     Site            order(152..155,160,173,175,192,206,224..227,230,232..233,
                     270,272,274..275,277,288,291,304,306..309,311,349..350)
                     /site_type="active"
                     /db_xref="CDD:270832"
     Site            order(152..155,160,173,175,206,224..227,230,233,274..275,
                     277,288)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270832"
     Site            order(184..186,188,191,195,198,208..211,213,220)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270832"
     Site            order(192,232,270,272,291,304,306..309,311,349..350)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270832"
     Site            order(287..298,303..311)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270832"
     CDS             1..702
                     /gene="LOC107909284"
                     /coded_by="XM_016836758.2:1104..3212"
                     /db_xref="GeneID:107909284"
ORIGIN      
        1 mgcmssksaa vqdsranqkk wltrkgsldk lvqranssgr eevvrskdkk gggdvkvllv
       61 nkksngssrf syndqvenkr ildkfevvvk nevekygvti aghhhpgser vlnsigelva
      121 agwpswlvav ageaingwip rrastfekln kigqgtyssv ykardlihnk lvalkrvqfd
      181 nhdpesakfm areiillrrl dhpnvmkleg litsptgcsl ylvfeymehd lvglaslpri
      241 kfsepqikcy mqqllsgldh chshgvlhrd ikgsnllids ngilkiadfg lacpfdphds
      301 vpmtnrvvtl wyrppelllg ashygvavdl wsagcilgel ysgkpilpgk teveqlhkif
      361 klcgsptdey wrkaklphst vfkplhpyrr cvaetfkdfp sptvtlmetl lsfdpvsrrt
      421 aafalkseff ttqplacdps slpryppske idaklrdeea rrqravesrg srvdmerrgq
      481 keplavpask sntefatstq rrqphpnlks ksqmfntgil meppppkqtp aakeesrdfl
      541 ehnrkkisys gplvggsvfr ksgkehddlp mvsskanlsk lsglvatrtl asddhrqkpg
      601 pltlqavihg akprrsfndf esarrhdvkq hmpktaaspv tggggacste tsphgggprg
      661 nkiyvsgpll apsdnvnqml kehdrkiqef arrrarlhkt kl
//
LOCUS       XP_040944949             206 aa            linear   PLN 06-AUG-2024
DEFINITION  DNA-directed RNA polymerase subunit alpha-like [Gossypium
            hirsutum].
ACCESSION   XP_040944949
VERSION     XP_040944949.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089015.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..206
                     /product="DNA-directed RNA polymerase subunit alpha-like"
                     /calculated_mol_wt=23006
     Region          11..>200
                     /region_name="rpoA"
                     /note="RNA polymerase alpha subunit; CHL00013"
                     /db_xref="CDD:214333"
     CDS             1..206
                     /gene="LOC121214785"
                     /coded_by="XM_041089015.1:40..660"
                     /db_xref="GeneID:121214785"
ORIGIN      
        1 mvrekvkvst strtrqwkcv esrtdskrly ygrfilsplm kgqadtigia mrrallgele
       61 gtcitrakse kipheystiv giqesvheil mnlkeivlrg nlygtrnafi cakgpgyvta
      121 qdiilppsve ivdntqhvas ltepidlcig lqiernrgyg iktpknfhdg sypidavfmp
      181 vrnanhsihc ygndnekqei pstlaf
//
LOCUS       XP_040944950             198 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_040944950
VERSION     XP_040944950.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089016.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..198
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22368
     Region          79..198
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cd06222"
                     /db_xref="CDD:259998"
     Site            order(82..85,117..118,121,146,185)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:259998"
     CDS             1..198
                     /gene="LOC121214787"
                     /coded_by="XM_041089016.1:1..597"
                     /db_xref="GeneID:121214787"
ORIGIN      
        1 mrvldkrama dlmttlwnyw nnrnnyifrg kveeakqiwe rasslnkefr icnmsnvpll
       61 sqnivekrwk kppkdvlkin fdatvgenkt gygmvirdee gfvlgggggi kegrrsveea
      121 ecmafeesik macrlnikdh vlfetdhvgl vnrlsnsand vttigarikd ctaafnsfks
      181 asliwtersc ntvahlic
//
LOCUS       XP_016692248             144 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692248
VERSION     XP_016692248.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836759.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..144
                     /product="uncharacterized protein"
                     /calculated_mol_wt=16455
     CDS             1..144
                     /gene="LOC107909285"
                     /coded_by="XM_016836759.2:558..992"
                     /db_xref="GeneID:107909285"
ORIGIN      
        1 mglsmffvic ilhsaiaits gslimfclne inifahgvqt aekllgstph dqlliqtsns
       61 fvglllfvig flvfmvafvk dkefqsffak gcilihlsma lwrvnferrl edlawdwprq
      121 vvgdillals wvffllytwr ekyd
//
LOCUS       XP_016692249             171 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692249
VERSION     XP_016692249.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836760.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692249.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..171
                     /product="uncharacterized protein"
                     /calculated_mol_wt=18423
     CDS             1..171
                     /gene="LOC107909286"
                     /coded_by="XM_016836760.2:343..858"
                     /db_xref="GeneID:107909286"
ORIGIN      
        1 meappstspt spppllppps sssssytlfi timskrrtwv flfvlvyail laslwnslks
       61 ilswykhqaq psssgwpaly asvllgavfg llsmvaalav avpatlvtwi tvlvllaffg
      121 kpkrtlvleg rkitreivgf vfkillkegn lvaavcavlg yfalirknsg e
//
LOCUS       XP_016692250             452 aa            linear   PLN 06-AUG-2024
DEFINITION  mannan endo-1,4-beta-mannosidase 2 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692250
VERSION     XP_016692250.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836761.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..452
                     /product="mannan endo-1,4-beta-mannosidase 2 isoform X1"
                     /calculated_mol_wt=51842
     Region          71..414
                     /region_name="COG3934"
                     /note="Endo-1,4-beta-mannosidase [Carbohydrate transport
                     and metabolism]"
                     /db_xref="CDD:443135"
     CDS             1..452
                     /gene="LOC107909288"
                     /coded_by="XM_016836761.2:530..1888"
                     /db_xref="GeneID:107909288"
ORIGIN      
        1 mkkdlrshws lrfliiyrkm vtrngmlypi lgfascvafl ymsfgdlkls anftkgprfs
       61 fverngtqff lngkplying wnsywlmahs vdessrpkvs amlqagakmg ltvcrtwafn
      121 dggynalqis pgqfdervfk aldyviaear qqgirlllsl vnnlqpyggk tqyvnwawqe
      181 gvglsssnds fffdpsirky fknyvltvlt rkntitgiqy rndptifawe lineprcmtd
      241 psgdtlqdwv eemsafiksi dknhlltigl egfygpsspk katvnpeqwa salgadfmrn
      301 snitnvdfas vhiypdqwfh glgfeekrny vskwmhshie dcdkelkkpv mfteyglsdq
      361 nkdfqlsqre qlyrtiqdii yksakkkgsg agalvwqffv egmqeysddf gmvpwqsppi
      421 ykltiehsck lariqgliqe ngnlkqlcsk rk
//
LOCUS       XP_016692251             446 aa            linear   PLN 06-AUG-2024
DEFINITION  mannan endo-1,4-beta-mannosidase 2 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692251
VERSION     XP_016692251.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836762.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..446
                     /product="mannan endo-1,4-beta-mannosidase 2 isoform X2"
                     /calculated_mol_wt=51035
     Region          65..408
                     /region_name="COG3934"
                     /note="Endo-1,4-beta-mannosidase [Carbohydrate transport
                     and metabolism]"
                     /db_xref="CDD:443135"
     CDS             1..446
                     /gene="LOC107909288"
                     /coded_by="XM_016836762.2:485..1825"
                     /db_xref="GeneID:107909288"
ORIGIN      
        1 mkkdlrshws lrkmvtrngm lypilgfasc vaflymsfgd lklsanftkg prfsfverng
       61 tqfflngkpl yingwnsywl mahsvdessr pkvsamlqag akmgltvcrt wafndggyna
      121 lqispgqfde rvfkaldyvi aearqqgirl llslvnnlqp yggktqyvnw awqegvglss
      181 sndsfffdps irkyfknyvl tvltrkntit giqyrndpti fawelinepr cmtdpsgdtl
      241 qdwveemsaf iksidknhll tiglegfygp sspkkatvnp eqwasalgad fmrnsnitnv
      301 dfasvhiypd qwfhglgfee krnyvskwmh shiedcdkel kkpvmfteyg lsdqnkdfql
      361 sqreqlyrti qdiiyksakk kgsgagalvw qffvegmqey sddfgmvpwq sppiykltie
      421 hscklariqg liqengnlkq lcskrk
//
LOCUS       XP_016692253             512 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ubiquitin-conjugating enzyme E2 38 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692253
VERSION     XP_016692253.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836764.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692253.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..512
                     /product="putative ubiquitin-conjugating enzyme E2 38
                     isoform X1"
                     /calculated_mol_wt=56703
     Region          259..455
                     /region_name="UBCc_UBE2O"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 O and related
                     proteins; cd23837"
                     /db_xref="CDD:467439"
     CDS             1..512
                     /gene="LOC107909291"
                     /coded_by="XM_016836764.2:193..1731"
                     /db_xref="GeneID:107909291"
ORIGIN      
        1 mdlrvddasi skrlkptqil lsdamdieqv edpttvlids ekagmgtkgk tkiccdkkwe
       61 dhvkdasasd qgisvsiags edsdnpfkss tsasinsnni nssnsdlsyp dddedcddya
      121 ddvsdygdnd dflyeddyai mqshfdnvdl ppgveasipw lkgsaplgnl ppavgvslst
      181 tpclaeskka ttsnladsel ksvstntsmv lresgsdrke gneengvvqn slsfkhfdiv
      241 ddfsdhhysn lnssgeqpke wakqiqeewk ilekdlpeti yvrvyearmd llraviigpt
      301 gtpyhdglfv fdcffppkyp keppmvyyys gglrlnpnly ncgkvclsll gtwhghqnem
      361 wvpgqstmlq vlvsiqalil narpffnepg yetsyvgaeg drrsrkynee vfilslktmi
      421 ytlrrppkhf edfvtghfrn raqdilvacq aykegaivgs vavkegvpda nkivkgssee
      481 fkgtipkmin avakefvkng stnceqfqsc rs
//
LOCUS       XP_016692254             497 aa            linear   PLN 06-AUG-2024
DEFINITION  putative ubiquitin-conjugating enzyme E2 38 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_016692254
VERSION     XP_016692254.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836765.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692254.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..497
                     /product="putative ubiquitin-conjugating enzyme E2 38
                     isoform X2"
                     /calculated_mol_wt=55014
     Region          244..440
                     /region_name="UBCc_UBE2O"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 O and related
                     proteins; cd23837"
                     /db_xref="CDD:467439"
     CDS             1..497
                     /gene="LOC107909291"
                     /coded_by="XM_016836765.2:142..1635"
                     /db_xref="GeneID:107909291"
ORIGIN      
        1 msfillsdam dieqvedptt vlidsekagm gtkgktkicc dkkwedhvkd asasdqgisv
       61 siagsedsdn pfksstsasi nsnninssns dlsypddded cddyaddvsd ygdnddflye
      121 ddyaimqshf dnvdlppgve asipwlkgsa plgnlppavg vslsttpcla eskkattsnl
      181 adselksvst ntsmvlresg sdrkegneen gvvqnslsfk hfdivddfsd hhysnlnssg
      241 eqpkewakqi qeewkilekd lpetiyvrvy earmdllrav iigptgtpyh dglfvfdcff
      301 ppkypkeppm vyyysgglrl npnlyncgkv clsllgtwhg hqnemwvpgq stmlqvlvsi
      361 qalilnarpf fnepgyetsy vgaegdrrsr kyneevfils lktmiytlrr ppkhfedfvt
      421 ghfrnraqdi lvacqaykeg aivgsvavke gvpdankivk gsseefkgti pkminavake
      481 fvkngstnce qfqscrs
//
LOCUS       XP_040944952             396 aa            linear   PLN 06-AUG-2024
DEFINITION  renalase [Gossypium hirsutum].
ACCESSION   XP_040944952
VERSION     XP_040944952.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089018.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..396
                     /product="renalase"
                     /calculated_mol_wt=43214
     Region          85..382
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..396
                     /gene="LOC121214788"
                     /coded_by="XM_041089018.1:323..1513"
                     /db_xref="GeneID:121214788"
ORIGIN      
        1 mapsalpsfs ssflfplktq ksfkppkplt iicssqepkk psknpqrpts rnrkrtpygt
       61 srrsilkktf tqeqvkftag vsadphvgii gggmagllca lslekrgvks tvfdtgmhgl
      121 ggrmgtrvid pqqlifdhaa qfftvsdsrf sklvdywlek glvrewqglv gqlelggrfv
      181 plpsspprfi gvngmrplad sllsetsmvn vvrpcwiskl epfngmwhls engkprgefd
      241 aiviahngkc anrllassgl pllarqmkrl dlssiwalla afehpfpmgd gkvtfqgafv
      301 kgvdsvswma nnslkllgsq sngphcwtff staaygkqnk vpqenipsqt aekvktsmle
      361 gveaalglpk gslprpiysr vqlcrgscke kgdeiq
//
LOCUS       XP_016692258            1770 aa            linear   PLN 06-AUG-2024
DEFINITION  callose synthase 12 [Gossypium hirsutum].
ACCESSION   XP_016692258
VERSION     XP_016692258.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836769.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692258.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1770
                     /product="callose synthase 12"
                     /calculated_mol_wt=206095
     Region          156..269
                     /region_name="FKS1_dom1"
                     /note="1,3-beta-glucan synthase subunit FKS1, domain-1;
                     pfam14288"
                     /db_xref="CDD:464126"
     Region          871..1637
                     /region_name="Glucan_synthase"
                     /note="1,3-beta-glucan synthase component; pfam02364"
                     /db_xref="CDD:426739"
     CDS             1..1770
                     /gene="LOC107909293"
                     /coded_by="XM_016836769.2:148..5460"
                     /db_xref="GeneID:107909293"
ORIGIN      
        1 mtlryrpgsq sgpprtared epyniipvhn lladhpslrf pevraaaaal rtvgdlrrpp
       61 yaqwqpsmdl ldwlalffgf qhdnvrnqre hlvlhlanaq msltpppdni dtldrsvlrr
      121 frrkllknyt swcsylgkks niwisdssrs nsdhrrelly vglylliwge sanlrfmpec
      181 icyifhhmam elnkiledyi dentgqpvmp sisgenafln cvvkpiyetv kaevesskng
      241 tashtawrny ddlneyfwsk rcfqklkwpi dvgsnffvts skskhigktg fveqrsfwnl
      301 yrsfdrlwvm lflflqaaii vaweekeypw qalsirncrv kiltlfitws gmrflqalld
      361 agmqysrvtr etlglgirmv lkvviaaawi vifavcygri wqnnhgrnwt aeadrrvrlf
      421 lqiafayvlp ellalalfvi pwvrnfieqt nwkifyllsw wfqsksfvgr glreglvdnv
      481 kytlfwalvl atkfafsyfl qikpmirptk qmldlkdvpy ewheifggsn rfavgllwlp
      541 vvfiylmdiq iwysiysafv gagvglflhl geirniqqlk lrfqffasai qfnlmpeeql
      601 lnargtfrsk lndaihrlkl ryglgrpfrk lesnqveahk fariwneiia ifreediisd
      661 revellelpq nswnvrvirw pclllcnell lalsqakelv dapdkslwnk ickseyrrca
      721 mieaydsikh mmleilnvqs eehsiltvlf qeidhsveie kftktfrmta lphlhmklik
      781 lvdiltkpkk dvnqvvntlq alyeiavrdf fkdkrtieql redglaprdp aamagllfen
      841 avklpdpsde kfyrqvrrlh tiltsrdsmq nipvnlearr riaffsnslf mnmphapqve
      901 kmmafsvltp yyneevlysr eqlrtenedg isilyylqti yddewknfme rmrregmvkd
      961 deiwttkmrd lrlwasyrgq tltrtvrgmm yyyralkmla fldsasemdi regarelgsm
     1021 rrdggldsfn serspssrtl sransslgll fkgheqgtcm mkytyvvacq iygaqkakkd
     1081 phaeeilylm kqhealrvay vdevstgrde eeyysvlvky dqqlekevei yrvklpgplk
     1141 lgegkpenqn haliftrgga vqtidmnqdn yfeealkmrn lleeykqyyg irkptilgvr
     1201 ehiftgsvss lawfmsaqet sfvtlgqrvl anplkirmhy ghpdvfdrfw flsrggiska
     1261 srvinisedi fagfnctlrg gnvthheyiq vgkgrdvgln qismfeakva sgngeqvlsr
     1321 dvyrlghrld ffrmlsffyt tvgfffntmm viltvyaflw grlylalsgv enaalssssd
     1381 nnralgailn qqfiiqlglf talpmivens lehgflqaiw dfitmqlqls svfytfsmgt
     1441 rthyfgrtvl hggakyratg rgfvvqhksf aenyrlyars hfvkaielgl ilivyashsp
     1501 vakdtfvyia ltisswflvl swimapfvfn psgfdwlktv ydfdefmnwi wyrggvfaka
     1561 eqswerwwye eqdhlrttgl wgklleiild lrffffqygi vyqlgianhs tsiavyllsw
     1621 iyifvafgiy lvisyardky aakehiyfrm vqflviilgi lviialleft afnfvdifts
     1681 llafiptgwg lisiaqvlrp flhstwlwes vvsvarlydi mfgvlvmvpl aflswmpgfq
     1741 smqtrilfne afsrglrifq ivtgkkssds
//
LOCUS       XP_016692259             546 aa            linear   PLN 06-AUG-2024
DEFINITION  putative uncharacterized protein DDB_G0290521 [Gossypium hirsutum].
ACCESSION   XP_016692259
VERSION     XP_016692259.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836770.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692259.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..546
                     /product="putative uncharacterized protein DDB_G0290521"
                     /calculated_mol_wt=59589
     Region          493..537
                     /region_name="DUF1421"
                     /note="UBA-like domain (DUF1421); pfam07223"
                     /db_xref="CDD:399892"
     CDS             1..546
                     /gene="LOC107909294"
                     /coded_by="XM_016836770.2:239..1879"
                     /db_xref="GeneID:107909294"
ORIGIN      
        1 masgssgrgn tgnskgfdfg sddilcsyed ygnqessngn htepnssnke fhkgrvarsm
       61 fppsgysqpe dsfssdvaat vektmkrytd nlmrflegis srlsqlelyc ynldrsigdm
      121 radlvhgngd adsklksiek hlqevhrsvq ilrdkqelae tqkelaklql aqkesssshs
      181 qsteervspp asdpkktdlt semqnqqlal slphqvasqq qpvaahsqap pqnltqqsyy
      241 mpsnqlsnpq apaaapspap apnpnpppap aqnqhppsqy ltsdpqyrpp qiqdisrmpt
      301 qptqaqgnqv qsfpqyqqqw pqqlsqqvqp qqqssmqpqm rapstpaysp ypptqstnqs
      361 qpealpnsma mqvsysglpq pvssradtit ygygvpgrta pqqppqqikg tfgaqptdry
      421 tgpgsnptfp pgsaymvyds eggrthhpsq qpnftqggyp paanvslqtq pgagpnvmvr
      481 ntnhpqfvrn hpyseliekl vsmgfrgdhv asviqrmees gqppdfnavl drlnahssgg
      541 sqrggw
//
LOCUS       XP_016692260             130 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692260
VERSION     XP_016692260.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836771.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..130
                     /product="uncharacterized protein"
                     /calculated_mol_wt=14332
     Region          <75..130
                     /region_name="PLN03107"
                     /note="eukaryotic translation initiation factor 5A;
                     Provisional"
                     /db_xref="CDD:215580"
     CDS             1..130
                     /gene="LOC107909295"
                     /coded_by="XM_016836771.2:246..638"
                     /db_xref="GeneID:107909295"
ORIGIN      
        1 mktlatisqv gllhrrrqmc lrplttvlsp aiapspmvnv ilmafsqdin slkhialmea
       61 kmkklsdlls ktieqtkenv vkklaltyee meqeckeimd gfaegkdlvv svmsamgeeq
      121 icalkdigpk
//
LOCUS       XP_016692261             161 aa            linear   PLN 06-AUG-2024
DEFINITION  GPI-anchored protein LLG3 [Gossypium hirsutum].
ACCESSION   XP_016692261
VERSION     XP_016692261.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836772.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..161
                     /product="GPI-anchored protein LLG3"
                     /calculated_mol_wt=17449
     CDS             1..161
                     /gene="LOC107909296"
                     /coded_by="XM_016836772.2:272..757"
                     /db_xref="GeneID:107909296"
ORIGIN      
        1 mglnslnlsf wflvcvfrfa sasthvsyda lvahettgrn llqatkscde dftkknytii
       61 tsrckgpeyp kknccgaltd facpfsvkvn dlnsdcartm fsyinlygky ppglfahlcq
      121 ggqkglscda dppaspatpl stlpaflflt sasltifslf l
//
LOCUS       XP_016692262             392 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692262
VERSION     XP_016692262.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836773.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692262.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..392
                     /product="uncharacterized protein"
                     /calculated_mol_wt=43878
     Region          151..375
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..392
                     /gene="LOC107909297"
                     /coded_by="XM_016836773.2:50..1228"
                     /db_xref="GeneID:107909297"
ORIGIN      
        1 mlssasnrvl tftlqfsssl kfspkthidy rpgslhssim ssasrsspre alfddsgcgg
       61 pitleewqrw gcvspvpamv naviqdlkll ennidahmvf ggnggklqgd fkiqedkkhr
      121 akyetladsd kkfqfysarq iacrllgsrg ylcqkcwlpm edcmcskvkp sslwhgikfw
      181 vymhpkdflr qnntgkllwq vfgvqaatlc lygisedeei mwnafkdagk akvwclypnh
      241 nnapktvqda fshqssadme caysltnkdr plnfvlidgt wsnsaamfrr vkeqaklawg
      301 eedipcisla tgasamhklr pqpswdrtct aaaaisvlae lqllpecsth gldkqaeave
      361 dalvvllevl ttrrlrmgrs itrkvrhsrd ic
//
LOCUS       XP_016692265             120 aa            linear   PLN 06-AUG-2024
DEFINITION  serine/threonine-protein kinase SRK2G [Gossypium hirsutum].
ACCESSION   XP_016692265
VERSION     XP_016692265.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836776.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..120
                     /product="serine/threonine-protein kinase SRK2G"
                     /calculated_mol_wt=13690
     Region          3..>117
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..120
                     /gene="LOC107909298"
                     /coded_by="XM_016836776.2:361..723"
                     /db_xref="GeneID:107909298"
ORIGIN      
        1 mekyevvkdl gagnfgvarl lrhkgtkelv amkyiekghk idenvareii nhrslrhpni
       61 irfkevvlmp thlaivieya gggelfdric sagrfsedea ryffqqliss vnychsmvlr
//
LOCUS       XP_016692266             261 aa            linear   PLN 06-AUG-2024
DEFINITION  E3 ubiquitin-protein ligase RMA1H1 [Gossypium hirsutum].
ACCESSION   XP_016692266
VERSION     XP_016692266.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836777.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..261
                     /product="E3 ubiquitin-protein ligase RMA1H1"
                     /calculated_mol_wt=29272
     Region          40..246
                     /region_name="PLN03208"
                     /note="E3 ubiquitin-protein ligase RMA2; Provisional"
                     /db_xref="CDD:178747"
     CDS             1..261
                     /gene="LOC107909299"
                     /coded_by="XM_016836777.2:395..1180"
                     /db_xref="GeneID:107909299"
ORIGIN      
        1 mdveqyfedn eaydppsteg krsldkwens pgpftgsddd psagfdcnic ldsvqdpvvt
       61 lcghlycwpc iykwlhcpti stdnldqkqq qcpvckaels nttliplygr gqttkastdn
      121 tpefgivipq rplaptygvg sirspnssdn lrfqqpvqhh gysyqpqiyy aqqgsypdss
      181 mlspggtmin vldpvtrmfs emvytrvfgn sitdlhtypn synlggttsr rirrqlmqad
      241 kslsrisffl ccciffclll f
//
LOCUS       XP_016692267             275 aa            linear   PLN 06-AUG-2024
DEFINITION  expansin-B3 [Gossypium hirsutum].
ACCESSION   XP_016692267
VERSION     XP_016692267.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836778.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692267.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..275
                     /product="expansin-B3"
                     /calculated_mol_wt=30118
     Region          47..171
                     /region_name="DPBB_EXPB_N"
                     /note="N-terminal double-psi beta-barrel fold domain of
                     the beta-expansin subfamily; cd22275"
                     /db_xref="CDD:439255"
     Site            order(88,92..93)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:439255"
     Region          179..255
                     /region_name="Expansin_C"
                     /note="Expansin C-terminal domain; pfam01357"
                     /db_xref="CDD:460173"
     CDS             1..275
                     /gene="LOC107909300"
                     /coded_by="XM_016836778.2:310..1137"
                     /db_xref="GeneID:107909300"
ORIGIN      
        1 mvaptlntmq rrcgftgfvt lccllllecl kvagnvpfaq evsdlhwhra vatwygspeg
       61 dgsdggacgy gslvdvkpfr arvgavssml fkkgegcgac ykvrcldksi csrravtiii
      121 tdespgnyga nigrphfdls gaafghmavh grntelrnrg elpvvyrrtp ckyrgkniaf
      181 hvnsgsndnw lsllveyedg dgdigsmhir eansnewiem nhlwganwcv nrgplkgpfs
      241 vklttlstgr tlsardvipr nwspkatyts rlnfl
//
LOCUS       XP_016692268             347 aa            linear   PLN 06-AUG-2024
DEFINITION  clathrin light chain 1 [Gossypium hirsutum].
ACCESSION   XP_016692268
VERSION     XP_016692268.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836779.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692268.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..347
                     /product="clathrin light chain 1"
                     /calculated_mol_wt=38355
     Region          <116..268
                     /region_name="Clathrin_lg_ch"
                     /note="Clathrin light chain; pfam01086"
                     /db_xref="CDD:460056"
     CDS             1..347
                     /gene="LOC107909301"
                     /coded_by="XM_016836779.2:161..1204"
                     /db_xref="GeneID:107909301"
ORIGIN      
        1 mesfdamnnd ggedinsssr pfdddaymgy dsssfppppp gqafpphdlt sdtthhvphn
       61 lnrsysnnla yiatttnnih tnnnnidpps pdvygsfras amdgsgiggd ghgndgffas
      121 egpvlpppde mheesfarre wrrqnaihle ekekreramr dqiiaeaeey krsfyekrdq
      181 ncetnkannr ereklymanq ekfhkeshlh ywkaiaeiip revatiekkr grkdpdkips
      241 ffviqgpkpg kltdlsrmrq illklkqnpp phmmpppkde kagkdgkdgk eakngkgstp
      301 adsggenkpa aagkdaaang gpvqpkpets asaeadnkvk pdpdssk
//
LOCUS       XP_016692269             526 aa            linear   PLN 06-AUG-2024
DEFINITION  probable polyol transporter 4 [Gossypium hirsutum].
ACCESSION   XP_016692269
VERSION     XP_016692269.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836780.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692269.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..526
                     /product="probable polyol transporter 4"
                     /calculated_mol_wt=56809
     Region          62..499
                     /region_name="MFS_PLT"
                     /note="Plant Polyol transporter family of the Major
                     Facilitator Superfamily of transporters; cd17437"
                     /db_xref="CDD:340995"
     Site            order(70,74,188,191..192,195,314..315,319..320,323..324,
                     352,414..415,418..419,423,446..447,450)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340995"
     CDS             1..526
                     /gene="LOC107909302"
                     /coded_by="XM_016836780.2:305..1885"
                     /db_xref="GeneID:107909302"
ORIGIN      
        1 mglvgvqgdg ngemalslgs knkykrmdse lsddfeddas hhhhqlerkk strkyvlaca
       61 ifaslnnvll gydvgvmsga iifiqkdlki tevqeevlvg ilsiisllgs laggrtsdvi
      121 grkwtmafaa ivfqigaaim tlassfevlm igrvlagvgi gfgvmiapvy iaeisptvdr
      181 gsltsfpeif inlgillgyv snyafsglsv hinwrvmlav gilpsvfigf alfiipespr
      241 wlvmqnrvee arsvllktne ndteveerls eivaaagisn gekneekavw rellspspsl
      301 rrmlitgfgi qcfqqitgid atvyyspeif hdagivnksk llaatvavgv tktlfiliat
      361 flvdrvgrkp llyvstigmt vclftlsisl aivgkgqlgi amallcvcgn vaffsvgmgp
      421 vcwiltseif plrlraqasa lgavgnrvcs gfvamsflsl artitvggtf flfslfsals
      481 vafvyklvpe tkgksleqie llfqnhnewd gsemelgdaq hlvhka
//
LOCUS       XP_016692270             334 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692270
VERSION     XP_016692270.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836781.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..334
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36860
     Region          3..133
                     /region_name="DUF4283"
                     /note="Domain of unknown function (DUF4283); pfam14111"
                     /db_xref="CDD:464086"
     Region          139..179
                     /region_name="zf-CCHC_4"
                     /note="Zinc knuckle; pfam14392"
                     /db_xref="CDD:433930"
     CDS             1..334
                     /gene="LOC107909303"
                     /coded_by="XM_016836781.2:509..1513"
                     /db_xref="GeneID:107909303"
ORIGIN      
        1 maltvivkvl gkkvgfnall nkvwalwslg nrfqlidlen dfylvrfqdk ddfdkvlmsg
       61 lwvifghyli erswssdssi annnldkqvv wirlpelskg cyskfllrai gqvislmvki
      121 dahtniaarg rfawmamcvd lnkplvskvr ingrlqmvey eslpnvcftc glyghsssfy
      181 lgrqavgvea aagqnesege kpnlqnrvdd epfgpwmlvd crqkgkwkss letkidggvt
      241 hvdgssfsvl eidnadidpa rrariegisd givngegiat ritgkkdvkl agdkssrkqn
      301 iarangkgif vgnghkvgrq ilkpnnngas lvck
//
LOCUS       XP_016692273            1033 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STABILIZED1 [Gossypium hirsutum].
ACCESSION   XP_016692273
VERSION     XP_016692273.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836784.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1033
                     /product="protein STABILIZED1"
                     /calculated_mol_wt=115223
     Region          2..78
                     /region_name="Ubl_ubiquitin_like"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin and
                     ubiquitin-like Ubl proteins; cd17039"
                     /db_xref="CDD:340559"
     Region          106..271
                     /region_name="PRP1_N"
                     /note="PRP1 splicing factor, N-terminal; pfam06424"
                     /db_xref="CDD:461908"
     Region          373..575
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          516..542
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          547..575
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          626..889
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          725..752
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Site            order(759,762..763,766..767,769,793,796..797,800..801,
                     803..804,827,830..831,834..835,838)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          759..786
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          772..1017
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          791..821
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          826..854
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          860..888
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1033
                     /gene="LOC107909304"
                     /coded_by="XM_016836784.2:134..3235"
                     /db_xref="GeneID:107909304"
ORIGIN      
        1 mvfiatpnsk tfslnlnpkt ttllslqqsi qlrtqipish qhlllspnpt ssllhspdpd
       61 svllsqlqit pystlflhvp lrggtqpgps gaavpkprld flnskpppny vaglgrgatg
      121 fttrsdigpa raapdlpdrs attiggaaap sglgrgrgkp gedeeddege dkgydenqkf
      181 defegndvgl fasaeydedd keadavweai dkrmdsrrkd rrearlkeei ekyrasnpki
      241 teqfadlkrk lhtlsneewe sipeigdysl rnkkrrfesf vpvpdtllek arqeqehvta
      301 ldpksraagg tetpwaqtpv tdltavgegr gtvlslkldr lsdsvsgltv vdpkgyltdl
      361 ksmkitsdae isdikkarll lksvtqtnpk hppgwiaaar leevagkiqt arqliqkgce
      421 ecpknedvwl eacrlaspde akaviakgvk sipnsvklwl qaaklehddv nksrvlrrgl
      481 enipdsvrlw kavvelanek daatllerav eccplhvelw lalarlkdyd kakkvlnrar
      541 eklpkepaiw itaakleean gnnamvgkii erciralqre gfvidreawm keaeaaerag
      601 svvtcqaiir ntigigveee drkrtwvada eeckkrgsie taraiyahal tvfltkksiw
      661 lkaaqleksh gtresldall rkavtyrpqa evlwlmgake kwlagdvpaa railqeayaa
      721 ipnseeiwla afklefenhe perarillak arerggterv wmksaivere lgnteeerrl
      781 ldeglkqfps ffklwlmlgq leerlgnlek akgvyesglk hcpsciplwv slaileekmn
      841 giakaravlt larkknpqqp elwlaairae arhgykkead ilmakalqec pnsgilwaas
      901 iemvprpqrk tksmdalkkc dhdphviaav aklfwhdrkv dkartwlnra vtlapdigdf
      961 walyykfelq hgseenqkdv mkrcvaaepk hgekwqaisk avenshqpte ailkkvvvvl
     1021 gkeesaaenn skh
//
LOCUS       XP_016692274             411 aa            linear   PLN 06-AUG-2024
DEFINITION  ethylene-responsive transcription factor ERF054-like [Gossypium
            hirsutum].
ACCESSION   XP_016692274
VERSION     XP_016692274.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836785.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692274.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..411
                     /product="ethylene-responsive transcription factor
                     ERF054-like"
                     /calculated_mol_wt=45584
     Region          202..264
                     /region_name="AP2"
                     /note="DNA-binding domain in plant proteins such as
                     APETALA2 and EREBPs; smart00380"
                     /db_xref="CDD:197689"
     Site            order(203..204,206,208,210,212,216,218,225,227,230)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:237985"
     CDS             1..411
                     /gene="LOC107909305"
                     /coded_by="XM_016836785.2:114..1349"
                     /db_xref="GeneID:107909305"
ORIGIN      
        1 mteannrgks qkgvvdetek mttfqdgete kgkhldsgse rrqwkpvfde asisqrplkk
       61 icsperhhpl pssaslahhs spssssssss sssssssslp ssrlvfpfaf dasqppiffp
      121 rqygntqqqq qqhgliyrpl yaaetslspq qqqqqqqllq hwsdalnlsp rgrmmttttr
      181 lgqdggpmfr pplqpvhttk lyrgvrqrhw gkwvaeirlp rnrtrlwlgt fdtaedaala
      241 ydreafklrg enarlnfpel flnkdkdtss ptptstvssp qtphesskqe qgptleinpp
      301 ppaqpqgdnp dsdemhitaa egssgagegv sgsqelvwgd maeawfntip agwgpaspvw
      361 ddldttnnll fpsnlpftnq nqqelndsdh qkqhvsasas spmkpffwkd q
//
LOCUS       XP_016690945             240 aa            linear   PLN 06-AUG-2024
DEFINITION  NDR1/HIN1-like protein 6 [Gossypium hirsutum].
ACCESSION   XP_016690945
VERSION     XP_016690945.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835456.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..240
                     /product="NDR1/HIN1-like protein 6"
                     /calculated_mol_wt=27525
     CDS             1..240
                     /gene="LOC107908214"
                     /coded_by="XM_016835456.2:170..892"
                     /db_xref="GeneID:107908214"
ORIGIN      
        1 mgiqyqpyha hvpdqahyyg qpqpyyyppp hpgqkpvpry hkeqrgsgtk wclrcvcccc
       61 ccfllfilcl vgamaffily ynpqkpnydv kefavksfnl ndntletdfk vsveadnpnd
      121 kisilyekgs mfdvsyqgtr icsgsgpefq qptknvtmln islegkndln snvkdsfied
      181 qkngkipldi hiyvpikfal enskskiidv mmkcyievds lkrdkkskil nkichykvnf
//
LOCUS       XP_016692275             355 aa            linear   PLN 06-AUG-2024
DEFINITION  xanthohumol 4-O-methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016692275
VERSION     XP_016692275.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836786.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..355
                     /product="xanthohumol 4-O-methyltransferase"
                     /calculated_mol_wt=39217
     Region          28..78
                     /region_name="dimerization"
                     /note="dimerization domain; pfam08100"
                     /db_xref="CDD:400439"
     Region          129..334
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..355
                     /gene="LOC107909306"
                     /coded_by="XM_016836786.2:69..1136"
                     /db_xref="GeneID:107909306"
ORIGIN      
        1 merieldeam lqgqaeiwry lysfadfmal tsavelriad iihsnggaat lsqiascisd
       61 gltspdital arimrllvrr kiftihppld ggdplynlth ssrwllhdse qtlapmvlme
      121 nhpwqmapwh yfsqcvkegg tafkkahgce iwdltsrdpn fnklfndgla ctskfitsai
      181 lsgykqgfns igslvdvggg tggliseivk vyphikgvnf dlphvvstap ayngvshigg
      241 dmfnaipntd aiiikwvlhn wndeecikil rnckkaipre ngkviiveii lkedgsgvfd
      301 digfvmdlvm fahnsgkert eaewkkileg ggfshykiin ipamvsiiea ypdaq
//
LOCUS       XP_016692276             355 aa            linear   PLN 06-AUG-2024
DEFINITION  xanthohumol 4-O-methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016692276
VERSION     XP_016692276.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836787.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..355
                     /product="xanthohumol 4-O-methyltransferase"
                     /calculated_mol_wt=39294
     Region          28..78
                     /region_name="dimerization"
                     /note="dimerization domain; pfam08100"
                     /db_xref="CDD:400439"
     Region          129..334
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..355
                     /gene="LOC107909307"
                     /coded_by="XM_016836787.2:69..1136"
                     /db_xref="GeneID:107909307"
ORIGIN      
        1 merieldeam lqgqaeiwry lysfadsmal ksavelriad iihsnggaat lsqiascind
       61 sltspnittl arimrllvrr kiftihppsd ggdplydlth ssrwllydse qtlvpmvlme
      121 nhpwqmapwh yfsqcvkegg vafkkahgce twdlasrnpd fnklfndgla ctskfitsai
      181 lsgykqgfns igslvdvggg tggliseivk vyphikgvnf dlphvvstap ayngvshigg
      241 dmfhaipntd aiimkwilhd wtdeecikil rnckkaipre ngkviiveii lkedgsgvfd
      301 digfvmdlvm fahtngkert eaewkkileg ggfshykiin ipalvsiiea ypdaq
//
LOCUS       XP_016692222             365 aa            linear   PLN 06-AUG-2024
DEFINITION  xanthohumol 4-O-methyltransferase [Gossypium hirsutum].
ACCESSION   XP_016692222
VERSION     XP_016692222.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836733.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..365
                     /product="xanthohumol 4-O-methyltransferase"
                     /calculated_mol_wt=40286
     Region          37..87
                     /region_name="dimerization"
                     /note="dimerization domain; pfam08100"
                     /db_xref="CDD:400439"
     Region          138..344
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..365
                     /gene="LOC107909265"
                     /coded_by="XM_016836733.2:553..1650"
                     /db_xref="GeneID:107909265"
ORIGIN      
        1 mssqesgrek etieldearl qgqaeiwrym fsfadsmalk savelriadi ihshgvaitl
       61 skiascings ltspdtttla rimrllvrrk iftvhhpsdg gdplydlths srwllhdseq
      121 tlapmvlmen hpwliapwhc fsqcvkergi afkkahgrei wdlasgnpef nklfndglac
      181 tskvvtsail sgykqglssi eslvdvgggi ggliseivka yphikgvnfd lphvvlaapa
      241 yngifhvggd mfhaipnana vimkwvlhdw gdedcikilr ncrkaipren gkviivevvv
      301 kaegsgvfdd mgfifdllmi ahssggkert evewkkilee ggfsrykiid ipalpsiiea
      361 ypddq
//
LOCUS       XP_016692221             316 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692221
VERSION     XP_016692221.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836732.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692221.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..316
                     /product="uncharacterized protein"
                     /calculated_mol_wt=36351
     Region          10..310
                     /region_name="DUF789"
                     /note="Protein of unknown function (DUF789); pfam05623"
                     /db_xref="CDD:461695"
     CDS             1..316
                     /gene="LOC107909263"
                     /coded_by="XM_016836732.2:1111..2061"
                     /db_xref="GeneID:107909263"
ORIGIN      
        1 mifetgstqs nlacflhctt ptvkshflpk seirnlnrlw hpwerekvey ftlgdlwncy
       61 dewsaygagv pivlnnaetl vqyyvpylsa iqiftsnssv ntfreetesg dgerdsfsds
      121 lsdesesdkl wrwdgcssed ggsehdslwh vnnrlgylyf qyferstpyg rvplmdking
      181 lsrrcpglms lrsvdlspas wmavywypiy hipmgrtikd lstcfltyht lsssfqdmdl
      241 eddienperk rkegegislp pfglatykmq gnvwvsgnsg rdqerlvsll svadswlkql
      301 rvqhhdfnyf tgirrg
//
LOCUS       XP_016692219             529 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 52 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692219
VERSION     XP_016692219.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836730.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..529
                     /product="probable protein phosphatase 2C 52 isoform X1"
                     /calculated_mol_wt=58434
     Region          135..427
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(139,143..144,164..166,372,418)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..529
                     /gene="LOC107909262"
                     /coded_by="XM_016836730.2:997..2586"
                     /db_xref="GeneID:107909262"
ORIGIN      
        1 mlfhfvfsst shssdasryl qayiglckwk vcfsnyipei ssgsrrnivl fnligcfvcg
       61 ademgcsvst ssrstcssgs rgeavsplff eigfcgtkrt krtfsdhvit lqnlpsvpnr
      121 iftngksrts ciftqqgrkg inqdamivwe dfmsedvtfc gvfdghgpqg hlvarkvrda
      181 lplkllssmh syqsrqngsg gaclkgnlkk sdgspedrln clwketfmks ykamdkelrs
      241 hpnldcfcsg stavtivkqg pnlfmgyigd sraimgskds ngsmvaiqlt vdlkpdlpre
      301 aerikkcrgr vfalqdepev prvwlpfdda pglamarafg dfclkeygvi sipefshrll
      361 terdqfivla sdgvwdvlsn eevveivsla ptrssaaril vdsaarewkl kyptskmddc
      421 avvclfldgk mdtesdyeeq glssatvqsn hsgnaietdd gqktelylpr nftvrssees
      481 dsygrvaaef egnvdavste dqnwsglegv trvnslvqlp rfseerpnp
//
LOCUS       XP_016692220             466 aa            linear   PLN 06-AUG-2024
DEFINITION  probable protein phosphatase 2C 52 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692220
VERSION     XP_016692220.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836731.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..466
                     /product="probable protein phosphatase 2C 52 isoform X2"
                     /calculated_mol_wt=51335
     Region          72..364
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(76,80..81,101..103,309,355)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..466
                     /gene="LOC107909262"
                     /coded_by="XM_016836731.2:543..1943"
                     /db_xref="GeneID:107909262"
ORIGIN      
        1 mgcsvstssr stcssgsrge avsplffeig fcgtkrtkrt fsdhvitlqn lpsvpnrift
       61 ngksrtscif tqqgrkginq damivwedfm sedvtfcgvf dghgpqghlv arkvrdalpl
      121 kllssmhsyq srqngsggac lkgnlkksdg spedrlnclw ketfmksyka mdkelrshpn
      181 ldcfcsgsta vtivkqgpnl fmgyigdsra imgskdsngs mvaiqltvdl kpdlpreaer
      241 ikkcrgrvfa lqdepevprv wlpfddapgl amarafgdfc lkeygvisip efshrllter
      301 dqfivlasdg vwdvlsneev veivslaptr ssaarilvds aarewklkyp tskmddcavv
      361 clfldgkmdt esdyeeqgls satvqsnhsg naietddgqk telylprnft vrsseesdsy
      421 grvaaefegn vdavstedqn wsglegvtrv nslvqlprfs eerpnp
//
LOCUS       XP_040944955             114 aa            linear   PLN 06-AUG-2024
DEFINITION  putative cell wall protein [Gossypium hirsutum].
ACCESSION   XP_040944955
VERSION     XP_040944955.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089021.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..114
                     /product="putative cell wall protein"
                     /calculated_mol_wt=11697
     CDS             1..114
                     /gene="LOC107907777"
                     /coded_by="XM_041089021.1:385..729"
                     /db_xref="GeneID:107907777"
ORIGIN      
        1 maskitsfll aqvfvvsill aigrqavatr niprnpenan qakhpewlig hdssvlipgl
       61 epknpycgri ggstdggsgy ipggddtfvp npgfevpipg ngagsasagk rqhp
//
LOCUS       XP_016692218             655 aa            linear   PLN 06-AUG-2024
DEFINITION  LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
            At1g03560, mitochondrial-like [Gossypium hirsutum].
ACCESSION   XP_016692218
VERSION     XP_016692218.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836729.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692218.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..655
                     /product="LOW QUALITY PROTEIN: pentatricopeptide
                     repeat-containing protein At1g03560, mitochondrial-like"
                     /calculated_mol_wt=73292
     Region          155..181
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          191..221
                     /region_name="PPR"
                     /note="pentatricopeptide repeat domain (PPR motif);
                     TIGR00756"
                     /db_xref="CDD:273253"
     Region          191..216
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <209..>549
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          224..251
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          259..286
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          292..356
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          329..352
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          364..391
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          397..426
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          432..461
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          467..496
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          502..531
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          537..563
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          606..633
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..655
                     /gene="LOC107909261"
                     /coded_by="XM_016836729.2:34..2001"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:107909261"
ORIGIN      
        1 mrrtlvkspi lfsisrlqsp plsspyrnvd plpnspklss nslsisfsrf mftpsyvppp
       61 ewiepfinls glsstnpqdl qpspwvsqil nlldgssnme snldsfchkf lirlspnfvs
      121 falssveiqn kpdvalrfft waakqkkyth klecyvslin vlalandlvk vrflfgqlke
      181 lgfvltmssa nsliknfgel gmveellwvw rrmkengiep slytfnflln glvnsmfies
      241 aervfevmed gkirpdvvsy ntmikgycka gktqkamell rvmesinlep dkitymtliq
      301 acysegnfds clalyhemge kgcevpphay slvvgglcke gkclegyvvf enmirnglka
      361 nvavyttlid afakcgkmee alelfermkt dglepdevsy gvivnglcks grldeameyl
      421 rfcranevav namfysslid glgkagrvde aqklfeemve kdcprdsycy nalidalakc
      481 grvnealtlf nrmedegcdq tvytytilis glfrerknee amklwdmmid kgftptaasf
      541 ralsiglcls gkvtrackil ddlapmgvip etaledmiyv lckagrvkea ckladgivdx
      601 greipgrirt vlinalrkag nanlamklmh skigigydrv gsikrrvkfr illes
//
LOCUS       XP_016692214             789 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692214
VERSION     XP_016692214.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836725.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692214.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..789
                     /product="protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1"
                     /calculated_mol_wt=85573
     Region          <86..773
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..776
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(505..508,511,513,525,527,558,574..577,627,631..632,
                     634,644..645)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..789
                     /gene="LOC107909258"
                     /coded_by="XM_016836725.2:607..2976"
                     /db_xref="GeneID:107909258"
ORIGIN      
        1 msskrsgmew knlniflgfl liyaarisfg ltnpsdvaai nslyaalgsp llpgwiasgg
       61 dpcaeawqgv qcngsdimsi vlnganlggq lgdnlgmfas ikaidlsnnq iggnipsnlp
      121 vtmqnfflsa nqfsgsipds lssltmltdm slnnnnlsge ipdafqslsg linldlsnnk
      181 lsgslppsme nlsslttlrl qanqlsgtld vlqdlplrdl niennlfngp ipekmlsips
      241 fkndgnpfns tvaplpgpts plapphapph fvvpasgqtp gkhadgpsas egsnssqkkn
      301 flttkrvvwi siasvllfii lalalllfmp kcsrgreeag gifkrhqvgt yrgnrenlvg
      361 dapltttasq iekgpkdaam rpvggnqter grmgdiaklp nkeeryveri gttpkrfdhe
      421 idmsgydvml mepprppppp pppppppppp pppalaekvi vkpivpnevt agpsaktpkp
      481 stfarsftia alqqytnsfs qenllgggml gsvyraelpd gkllavkkle krvasqqkdd
      541 efielvenid riqhvnvvrl mgycaehgqk lliyeycsng slqdalhsdd efkkllswnt
      601 rirmalgaar aleymheach ppvihrnfns anvlldddld vrvsdcglap liasgsvsql
      661 sgqlqsiygy gapefesgiy tsqsdvysfg vfmlelltgr kshdrtrsrg eqflvrwaip
      721 qlhdiealsr mvdpslngey pakalsrfad iisrcvqsep efrppmsevv qdlldiirre
      781 rpsnesigd
//
LOCUS       XP_016692215             789 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016692215
VERSION     XP_016692215.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836726.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692215.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..789
                     /product="protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1"
                     /calculated_mol_wt=85573
     Region          <86..773
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          505..776
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(505..508,511,513,525,527,558,574..577,627,631..632,
                     634,644..645)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..789
                     /gene="LOC107909258"
                     /coded_by="XM_016836726.2:152..2521"
                     /db_xref="GeneID:107909258"
ORIGIN      
        1 msskrsgmew knlniflgfl liyaarisfg ltnpsdvaai nslyaalgsp llpgwiasgg
       61 dpcaeawqgv qcngsdimsi vlnganlggq lgdnlgmfas ikaidlsnnq iggnipsnlp
      121 vtmqnfflsa nqfsgsipds lssltmltdm slnnnnlsge ipdafqslsg linldlsnnk
      181 lsgslppsme nlsslttlrl qanqlsgtld vlqdlplrdl niennlfngp ipekmlsips
      241 fkndgnpfns tvaplpgpts plapphapph fvvpasgqtp gkhadgpsas egsnssqkkn
      301 flttkrvvwi siasvllfii lalalllfmp kcsrgreeag gifkrhqvgt yrgnrenlvg
      361 dapltttasq iekgpkdaam rpvggnqter grmgdiaklp nkeeryveri gttpkrfdhe
      421 idmsgydvml mepprppppp pppppppppp pppalaekvi vkpivpnevt agpsaktpkp
      481 stfarsftia alqqytnsfs qenllgggml gsvyraelpd gkllavkkle krvasqqkdd
      541 efielvenid riqhvnvvrl mgycaehgqk lliyeycsng slqdalhsdd efkkllswnt
      601 rirmalgaar aleymheach ppvihrnfns anvlldddld vrvsdcglap liasgsvsql
      661 sgqlqsiygy gapefesgiy tsqsdvysfg vfmlelltgr kshdrtrsrg eqflvrwaip
      721 qlhdiealsr mvdpslngey pakalsrfad iisrcvqsep efrppmsevv qdlldiirre
      781 rpsnesigd
//
LOCUS       XP_040944957             715 aa            linear   PLN 06-AUG-2024
DEFINITION  protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X2 [Gossypium
            hirsutum].
ACCESSION   XP_040944957
VERSION     XP_040944957.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089023.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..715
                     /product="protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X2"
                     /calculated_mol_wt=77854
     Region          <12..699
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..96
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          431..702
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(431..434,437,439,451,453,484,500..503,553,557..558,
                     560,570..571)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..715
                     /gene="LOC107909258"
                     /coded_by="XM_041089023.1:280..2427"
                     /db_xref="GeneID:107909258"
ORIGIN      
        1 marrtivlng anlggqlgdn lgmfasikai dlsnnqiggn ipsnlpvtmq nfflsanqfs
       61 gsipdslssl tmltdmslnn nnlsgeipda fqslsglinl dlsnnklsgs lppsmenlss
      121 lttlrlqanq lsgtldvlqd lplrdlnien nlfngpipek mlsipsfknd gnpfnstvap
      181 lpgptsplap phapphfvvp asgqtpgkha dgpsasegsn ssqkknfltt krvvwisias
      241 vllfiilala lllfmpkcsr greeaggifk rhqvgtyrgn renlvgdapl tttasqiekg
      301 pkdaamrpvg gnqtergrmg diaklpnkee ryverigttp krfdheidms gydvmlmepp
      361 rppppppppp pppppppppa laekvivkpi vpnevtagps aktpkpstfa rsftiaalqq
      421 ytnsfsqenl lgggmlgsvy raelpdgkll avkklekrva sqqkddefie lvenidriqh
      481 vnvvrlmgyc aehgqklliy eycsngslqd alhsddefkk llswntrirm algaaraley
      541 mheachppvi hrnfnsanvl ldddldvrvs dcglaplias gsvsqlsgql qsiygygape
      601 fesgiytsqs dvysfgvfml elltgrkshd rtrsrgeqfl vrwaipqlhd iealsrmvdp
      661 slngeypaka lsrfadiisr cvqsepefrp pmsevvqdll diirrerpsn esigd
//
LOCUS       XP_016692217             627 aa            linear   PLN 06-AUG-2024
DEFINITION  pentatricopeptide repeat-containing protein At1g03540 [Gossypium
            hirsutum].
ACCESSION   XP_016692217
VERSION     XP_016692217.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836728.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692217.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..627
                     /product="pentatricopeptide repeat-containing protein
                     At1g03540"
                     /calculated_mol_wt=70399
     Region          <66..617
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          102..128
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          132..159
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          165..194
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          200..228
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          233..260
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          267..296
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          302..331
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          335..393
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          399..428
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          432..459
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          465..495
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          501..525
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          533..561
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          566..596
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..627
                     /gene="LOC107909259"
                     /coded_by="XM_016836728.2:122..2005"
                     /db_xref="GeneID:107909259"
ORIGIN      
        1 mklffvkrhc cslasfnpnn svkhpsdkyf qilhfcrsaq lvpaihllnt lhvptltfss
       61 nkrclyasll qtctnvqafp lgvqfhahvi ksgldtdrfv gnsllalyfk lgpdfretrr
      121 vfdglfvkdv iswtsmvsgy ikagkpecsl emfsemlglg vepnaftlsa iikvcsvlgk
      181 lrlgwclhgv iakrgfdsns vilcglidfy griwqlkeac qlfdelpepd aicwtsiiss
      241 ltrndlykea lhffylmqrn hglipdgftf gtvltacgni grlrqgkqvh akvitcglcg
      301 nvvvesslld mygkcglide sqrifdrmsk rnsvswsall gvycqnkdye svirifremd
      361 vsdlycfgti lracaglaav rlgkevhcqy vrrggwrdvi vesalvdlya kcgcidfahr
      421 ifvqmsnrnl itwnsmiygf aqngrggeal sifyemikeg ikpdyisfig vlfacshsgl
      481 vdqgrkyfnl mtreygikpg iehyncmvnl lgraglleea enliesaelr ddsslwavll
      541 gacttstsss naeriakkmi elepnhhmny vllanvyrai grwndalkvr qlmedrgvkk
      601 irgtswvett gnmssyidvv dtdiscr
//
LOCUS       XP_016692213              68 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692213
VERSION     XP_016692213.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836724.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692213.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..68
                     /product="uncharacterized protein"
                     /calculated_mol_wt=7494
     CDS             1..68
                     /gene="LOC107909257"
                     /coded_by="XM_016836724.2:145..351"
                     /db_xref="GeneID:107909257"
ORIGIN      
        1 mvcfcflvdq tkkvskskpa agfcsrcggg asvadmktct rfcyvpfywk swkaiictfc
       61 gailrsyr
//
LOCUS       XP_016692212             236 aa            linear   PLN 06-AUG-2024
DEFINITION  protein ULTRAPETALA 1 [Gossypium hirsutum].
ACCESSION   XP_016692212
VERSION     XP_016692212.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836723.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..236
                     /product="protein ULTRAPETALA 1"
                     /calculated_mol_wt=26816
     CDS             1..236
                     /gene="LOC107909255"
                     /coded_by="XM_016836723.2:616..1326"
                     /db_xref="GeneID:107909255"
ORIGIN      
        1 meneveresg smifsdeeli evsglkkgrd fievtcgcts hrygdavgkl rvfsngdlei
       61 tcectpgcne dkltpaafek hsgretarkw knnvwvivng ekvslsktal lkyynqaskn
      121 angtnrshng rvchrdefvr csrcnkerrf rlrtkeecri hhdaladvnw kcsdlpydri
      181 tcddeeeras rrvyrgctrs ptckgctscv cfgceicrft dcscqtcidf trnakv
//
LOCUS       XP_016692209             299 aa            linear   PLN 06-AUG-2024
DEFINITION  formimidoyltransferase-cyclodeaminase [Gossypium hirsutum].
ACCESSION   XP_016692209
VERSION     XP_016692209.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836720.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..299
                     /product="formimidoyltransferase-cyclodeaminase"
                     /calculated_mol_wt=32302
     Region          6..195
                     /region_name="FTCD_N"
                     /note="Formiminotransferase domain, N-terminal subdomain;
                     pfam07837"
                     /db_xref="CDD:462283"
     Region          203..>290
                     /region_name="FTCD"
                     /note="Formiminotransferase domain; pfam02971"
                     /db_xref="CDD:460770"
     CDS             1..299
                     /gene="LOC107909253"
                     /coded_by="XM_016836720.2:315..1214"
                     /db_xref="GeneID:107909253"
ORIGIN      
        1 mlskmlacgk vyisesrnra alesieraak lfpeaaivnk fiddtynrvg ytvvsrltpk
       61 psqdscslkd avfaivkval etidfelhsg thprlgvvdh icfhplahas ldqtavvaks
      121 laadigsklk vptflygaae ergrlldsvr relgyfkpns gsilwsggsk seslplkpda
      181 gptqvsptkg viligtthwv vnynvpvfst diaavrriak hvserggglp svqamglahg
      241 dgitevacnl lkpnevggdr iqveverlak eeglrvgkgy ftdlipdeii erymklssh
//
LOCUS       XP_016692210             299 aa            linear   PLN 06-AUG-2024
DEFINITION  formimidoyltransferase-cyclodeaminase [Gossypium hirsutum].
ACCESSION   XP_016692210
VERSION     XP_016692210.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836721.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..299
                     /product="formimidoyltransferase-cyclodeaminase"
                     /calculated_mol_wt=32302
     Region          6..195
                     /region_name="FTCD_N"
                     /note="Formiminotransferase domain, N-terminal subdomain;
                     pfam07837"
                     /db_xref="CDD:462283"
     Region          203..>290
                     /region_name="FTCD"
                     /note="Formiminotransferase domain; pfam02971"
                     /db_xref="CDD:460770"
     CDS             1..299
                     /gene="LOC107909253"
                     /coded_by="XM_016836721.2:564..1463"
                     /db_xref="GeneID:107909253"
ORIGIN      
        1 mlskmlacgk vyisesrnra alesieraak lfpeaaivnk fiddtynrvg ytvvsrltpk
       61 psqdscslkd avfaivkval etidfelhsg thprlgvvdh icfhplahas ldqtavvaks
      121 laadigsklk vptflygaae ergrlldsvr relgyfkpns gsilwsggsk seslplkpda
      181 gptqvsptkg viligtthwv vnynvpvfst diaavrriak hvserggglp svqamglahg
      241 dgitevacnl lkpnevggdr iqveverlak eeglrvgkgy ftdlipdeii erymklssh
//
LOCUS       XP_040944958             137 aa            linear   PLN 06-AUG-2024
DEFINITION  protein LTO1 homolog [Gossypium hirsutum].
ACCESSION   XP_040944958
VERSION     XP_040944958.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089024.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="protein LTO1 homolog"
                     /calculated_mol_wt=15489
     Region          22..60
                     /region_name="Yae1_N"
                     /note="Essential protein Yae1, N terminal; pfam09811"
                     /db_xref="CDD:430844"
     CDS             1..137
                     /gene="LOC121214791"
                     /coded_by="XM_041089024.1:1..414"
                     /db_xref="GeneID:121214791"
ORIGIN      
        1 mdsaedifns slnleethyq egykegynhg vttgkeegke vglktgfetg eelgfykgcv
       61 dvwnsaiqid ptrfstrvqk gikqmqeliq kypvmdpede svqeimealr lkftviraal
      121 gvkleylgyp kpkdief
//
LOCUS       XP_016692207             550 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein DDB_G0290685 [Gossypium hirsutum].
ACCESSION   XP_016692207
VERSION     XP_016692207.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836718.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..550
                     /product="uncharacterized protein DDB_G0290685"
                     /calculated_mol_wt=61725
     Region          <70..>171
                     /region_name="KpsE"
                     /note="Capsule polysaccharide export protein KpsE/RkpR
                     [Cell wall/membrane/envelope biogenesis]; COG3524"
                     /db_xref="CDD:442746"
     CDS             1..550
                     /gene="LOC107909251"
                     /coded_by="XM_016836718.2:189..1841"
                     /db_xref="GeneID:107909251"
ORIGIN      
        1 mgggllshkg ngsgsghkgr pyvlmlllaf gaallgvmvl hkfrerrifn lliedknrql
       61 lslqlllqke reytkdmrrk aeetkakiyy lrnqkmeldr rlldmlstld slkdeqkame
      121 saleekkiei kllrdkdlnt gnenpqiial tatlkqkeae ieelkhrltg qvrvwsvstd
      181 dpsnpkvnmt kgktefsrqe ssrvhessyk gghgsskgqd gtetkfsfsq eedkgegfed
      241 gnekrggqqq klestgenan nqgairemki gdaddtgnyg vdgkknhana idtindvdne
      301 qekrssfggq lgkrrdphle serireggkk ldidensris slpgrvghls rskgkrwrsl
      361 arnrllkrnv nsgidalenm tgrrlskenk alvrskedga gseepqkder dktektglrk
      421 emgarnnlfe hrnsedtedm ndrkvsskts hqvegenamq rnqndslama mqdtgvigea
      481 snytqgtnhv kveeaakikq iegheteedt evayeqepkt eaekgdlssn fmsesdgkeg
      541 nkddtsdpnf
//
LOCUS       XP_016692208              98 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692208
VERSION     XP_016692208.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836719.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692208.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..98
                     /product="uncharacterized protein"
                     /calculated_mol_wt=10524
     CDS             1..98
                     /gene="LOC107909252"
                     /coded_by="XM_016836719.2:112..408"
                     /db_xref="GeneID:107909252"
ORIGIN      
        1 matlaavaar riatvartpa pckaaslipr rglagaadhh ghpkvncwqe pmnpanwkee
       61 hfvivsltgw glvfyggykf ltkgkgkkee ntvetakk
//
LOCUS       XP_016692204             458 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692204
VERSION     XP_016692204.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836715.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..458
                     /product="uncharacterized protein"
                     /calculated_mol_wt=51416
     CDS             1..458
                     /gene="LOC107909249"
                     /coded_by="XM_016836715.2:143..1519"
                     /db_xref="GeneID:107909249"
ORIGIN      
        1 msilqypdsf nvpelqvwnn aafdngesed tnaikdswcn fnsgsvnqsl esdgskenqs
       61 plwikspisf kstasvvkpl ssknvtgntr epipakmksg vckeeekkrd ekkidmeiee
      121 iekevgrlsa kleslrleka eynarsismk grivpakfme qkqsiknlet tkkmedplfs
      181 svkakmnrrg vslgpteifs atksrqflkq etttpiqsiq srrkscffkl qdidegkctr
      241 drgkslslsp ksrktvskvl apkaaattvg skrsvkkdeg vlstiqpkrl fkdgekplta
      301 kkplkpgrvv ssrynqignq sngnftvkda rkrsltqndk qesnrhdkkr vsnervvesc
      361 knqksenrvk kkweipsevi ilkgatqdes pqsidkindv lpkirtvrvw aesprdsgpa
      421 krvaeltgrk syfsmeeeae edsvcqalsf aeedgeeq
//
LOCUS       XP_016692206             424 aa            linear   PLN 06-AUG-2024
DEFINITION  putative pentatricopeptide repeat-containing protein At1g03510
            [Gossypium hirsutum].
ACCESSION   XP_016692206
VERSION     XP_016692206.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836717.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692206.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..424
                     /product="putative pentatricopeptide repeat-containing
                     protein At1g03510"
                     /calculated_mol_wt=46929
     Region          <11..424
                     /region_name="PLN03077"
                     /note="Protein ECB2; Provisional"
                     /db_xref="CDD:215561"
     Region          87..111
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          113..139
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          145..174
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          222..245
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          249..276
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          282..312
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          318..347
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          383..413
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..424
                     /gene="LOC107909250"
                     /coded_by="XM_016836717.2:258..1532"
                     /db_xref="GeneID:107909250"
ORIGIN      
        1 mssnstnymr llsltkqlts yvnqgrhlda lslfhtmqts psltldpfvf plvlkscaai
       61 hrrrlassih ahatksslls nqfvacalid mygkcfsisl arklfdeipq rnavswssmi
      121 slytrygrmd aalglfqsmd vepnestfna iiagltevgd gpskaigfyr rmqelglrpn
      181 litllallpa cvvlaalssi keihgyafrs niephpqlrs glveaygrca slvnarnvfr
      241 ymkerdvvaw sslisayalh gearaalevf kqmelakvrp dditflgvlk acshaglade
      301 algyfdrmri dykveasadh ysclvdalsr agrlyeaykv ikemtmkpta ktwgallgac
      361 rtygevelae iagralfeie psnaanyvll akiyasvgry eeaermrmem kergvkaapg
      421 sswi
//
LOCUS       XP_040944959             195 aa            linear   PLN 06-AUG-2024
DEFINITION  RNA-binding protein 1 [Gossypium hirsutum].
ACCESSION   XP_040944959
VERSION     XP_040944959.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089025.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..195
                     /product="RNA-binding protein 1"
                     /calculated_mol_wt=22485
     Region          <2..>151
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          84..161
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..195
                     /gene="LOC121214792"
                     /coded_by="XM_041089025.1:13..600"
                     /db_xref="GeneID:121214792"
ORIGIN      
        1 mkftnlklvi ngistemder ilrrhfsayg evkhvvvdvk kaiafvtfvd pskaqislqq
       61 qhiilgrkve vrpakpkvei gkrkifvggl prsitdeefk gyfekfgsiv davvihdket
      121 krsrgfgfvt yeaeesanlv lrtnfhllnn krvevkkvtp rqemlptgfg fppyyydpyy
      181 qtyfyvvwvp ipgfy
//
LOCUS       XP_016692203              86 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692203
VERSION     XP_016692203.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836714.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..86
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9194
     Region          1..86
                     /region_name="DUF3774"
                     /note="Wound-induced protein; cl13983"
                     /db_xref="CDD:472681"
     CDS             1..86
                     /gene="LOC107909244"
                     /coded_by="XM_016836714.2:131..391"
                     /db_xref="GeneID:107909244"
ORIGIN      
        1 msstsrawia aasigaveal kdqgicrwny tarsvvqhak nhvrsasqvk nlssqssaai
       61 skgllqskqs eeslrtvmyl scwgpn
//
LOCUS       XP_016692202              86 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692202
VERSION     XP_016692202.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836713.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..86
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9253
     Region          1..86
                     /region_name="DUF3774"
                     /note="Wound-induced protein; cl13983"
                     /db_xref="CDD:472681"
     CDS             1..86
                     /gene="LOC107909243"
                     /coded_by="XM_016836713.2:271..531"
                     /db_xref="GeneID:107909243"
ORIGIN      
        1 msstsrawiv aasigaveal kdqgicrwny tvrsavqhak nhmrsasqak nlssqssaai
       61 skglrqskqs eealrtvmyl scwgpn
//
LOCUS       XP_016692201              86 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692201
VERSION     XP_016692201.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836712.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692201.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..86
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9209
     Region          1..86
                     /region_name="DUF3774"
                     /note="Wound-induced protein; cl13983"
                     /db_xref="CDD:472681"
     CDS             1..86
                     /gene="LOC107909242"
                     /coded_by="XM_016836712.2:144..404"
                     /db_xref="GeneID:107909242"
ORIGIN      
        1 mssssrawiv aasigaveal kdqgicrwny tvrsvvqhak nhvrsasqak nlssqssaai
       61 skglnkskqs eeslrtvmyl scwgpn
//
LOCUS       XP_016692199              86 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692199
VERSION     XP_016692199.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836710.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..86
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9245
     Region          1..86
                     /region_name="DUF3774"
                     /note="Wound-induced protein; cl13983"
                     /db_xref="CDD:472681"
     CDS             1..86
                     /gene="LOC107909240"
                     /coded_by="XM_016836710.2:205..465"
                     /db_xref="GeneID:107909240"
ORIGIN      
        1 msssrrawiv aasigaveal kdqgicrwny aakavvqhak nyvrsasqak nlssqssaai
       61 skglrqskqs eeslrtvmyl scwgpn
//
LOCUS       XP_016692200              86 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692200
VERSION     XP_016692200.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836711.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692200.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..86
                     /product="uncharacterized protein"
                     /calculated_mol_wt=9209
     Region          1..86
                     /region_name="DUF3774"
                     /note="Wound-induced protein; cl13983"
                     /db_xref="CDD:472681"
     CDS             1..86
                     /gene="LOC107909241"
                     /coded_by="XM_016836711.2:1..261"
                     /db_xref="GeneID:107909241"
ORIGIN      
        1 msstsrawvv aasigaveal kdqgicrwny tvrsvvqhak nhvrsasqak nlssqssaai
       61 skglnkskqs eeslrtvmyl scwgpn
//
LOCUS       XP_016690581             338 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB41 [Gossypium hirsutum].
ACCESSION   XP_016690581
VERSION     XP_016690581.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835092.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016690581.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..338
                     /product="transcription factor MYB41"
                     /calculated_mol_wt=37407
     Region          1..>300
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     Region          4..>128
                     /region_name="PLN03212"
                     /note="Transcription repressor MYB5; Provisional"
                     /db_xref="CDD:178751"
     CDS             1..338
                     /gene="LOC107907774"
                     /coded_by="XM_016835092.2:115..1131"
                     /db_xref="GeneID:107907774"
ORIGIN      
        1 mgrtpccdks glkkgpwtae edlkltnyiq vhgpgnwrtl pknaglqrcg kscrlrwtny
       61 lrpdirrgrf sfeeeetiiq lhgilgnkws aiagqlpgrt dneiknywnt hirkrllrng
      121 idpvthaprl dlldlssiis stlcnqslln vsnllgtqal lnpqllslan tllslkqenp
      181 emlmqylhqn qlnldpslqa piasvcttts tvpcctsmls qtgliqatge gffssdktnf
      241 sypnsqenlt nltnefaaqp hyvqcstnpt vpilsetskf qsmdgsfdsv rssaissptp
      301 lnssstfvns sstdderesf ssllkfeipe gldindfm
//
LOCUS       XP_016692198             325 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized GPI-anchored protein At4g28100 [Gossypium
            hirsutum].
ACCESSION   XP_016692198
VERSION     XP_016692198.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836709.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692198.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..325
                     /product="uncharacterized GPI-anchored protein At4g28100"
                     /calculated_mol_wt=35046
     Region          55..225
                     /region_name="SPARK"
                     /note="pfam19160"
                     /db_xref="CDD:465984"
     CDS             1..325
                     /gene="LOC107909239"
                     /coded_by="XM_016836709.2:398..1375"
                     /db_xref="GeneID:107909239"
ORIGIN      
        1 mvafplvstf fllfsftffp hslagflaqp vpgsdeplkp ggysspntvp afpaqtqaqi
       61 crldlsaelf ggvndacghn ldrgrccpvl aawlfaahar yalevtapap aeselpeqpm
      121 rpddsqkcvn slqdsllskr vripqpnasc dailcfcgir lhqisslscp aafnvsghhr
      181 natptaavkn lekncrnsty agctkclgal qklkggynkn gtqdksttdr askmfnrdcq
      241 lmgltwllar nktayiptvs avlraimysa hpheskcspd qenmplavds lqfekaqsss
      301 pksppswasf tfpvlppiil gllfg
//
LOCUS       XP_016692197             227 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b6-f complex iron-sulfur subunit, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016692197
VERSION     XP_016692197.2
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836708.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 25, 2021 this sequence version replaced XP_016692197.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="cytochrome b6-f complex iron-sulfur subunit,
                     chloroplastic"
                     /calculated_mol_wt=24186
     Region          52..227
                     /region_name="PRK13474"
                     /note="cytochrome b6-f complex iron-sulfur subunit;
                     Provisional"
                     /db_xref="CDD:237392"
     Site            order(133..134,162)
                     /site_type="other"
                     /note="cytochrome b subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239553"
     Site            order(156,158..159,161,174,177,179)
                     /site_type="other"
                     /note="[2Fe-2S] cluster binding site [ion binding]"
                     /db_xref="CDD:239553"
     CDS             1..227
                     /gene="LOC107909237"
                     /coded_by="XM_016836708.2:319..1002"
                     /db_xref="GeneID:107909237"
ORIGIN      
        1 masstlspaa pwqlcsgksg mfcpsqaflv kptrthmvkn ekgmritcqa tsipadrvpd
       61 mgkrqlmnll llgaislpsg fmlvpyaaff vpsggrgtgg gtvakdaign dviaeewlkt
      121 hgpgdrtltq glkgdptylv vekdrtlaty ginavcthlg cvvpwnqaen kficpchgsq
      181 yndqgrvvrg paplslalah agvedgkvvf vpwvetdfrt gdgpwws
//
LOCUS       XP_016692196             227 aa            linear   PLN 06-AUG-2024
DEFINITION  cytochrome b6-f complex iron-sulfur subunit, chloroplastic
            [Gossypium hirsutum].
ACCESSION   XP_016692196
VERSION     XP_016692196.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836707.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..227
                     /product="cytochrome b6-f complex iron-sulfur subunit,
                     chloroplastic"
                     /calculated_mol_wt=24117
     Region          52..227
                     /region_name="PRK13474"
                     /note="cytochrome b6-f complex iron-sulfur subunit;
                     Provisional"
                     /db_xref="CDD:237392"
     Site            order(133..134,162)
                     /site_type="other"
                     /note="cytochrome b subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239553"
     Site            order(156,158..159,161,174,177,179)
                     /site_type="other"
                     /note="[2Fe-2S] cluster binding site [ion binding]"
                     /db_xref="CDD:239553"
     CDS             1..227
                     /gene="LOC107909236"
                     /coded_by="XM_016836707.2:528..1211"
                     /db_xref="GeneID:107909236"
ORIGIN      
        1 masstfspaa psqlcsgksg mfcpsqaflv kptrthlvkn ekgmritcqa tsipadrvpd
       61 mgkrqlmnll llgaislpsg fmlvpyaaff vpsggrgtgg gtvakdaign dviaeewlkt
      121 hgpgdrtltq glkgdptylv vekdrtlaty ginavcthlg cvvpwnqaen kficpchgsq
      181 yndqgrvvrg paplslalah agvedgkvvf vpwvetdfrt gdapwws
//
LOCUS       XP_016692277             308 aa            linear   PLN 06-AUG-2024
DEFINITION  putative cyclin-D6-1 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_016692277
VERSION     XP_016692277.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836788.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..308
                     /product="putative cyclin-D6-1 isoform X1"
                     /calculated_mol_wt=34479
     Region          50..147
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          152..240
                     /region_name="CYCLIN_AtCycD-like_rpt2"
                     /note="second cyclin box found in plant cyclin-delta
                     family; cd20544"
                     /db_xref="CDD:410247"
     CDS             1..308
                     /gene="LOC107909309"
                     /coded_by="XM_016836788.2:182..1108"
                     /db_xref="GeneID:107909309"
ORIGIN      
        1 meldlenpls nvndlfpaas tpslfllesh hmptlyyint lkathldisv rreaissisq
       61 lsckfgpflp ylaityldrf lssqgvavkn qpntwvlrlv aiscvslaak mmktdfslad
      121 fqgdggfmfd aqtvermeyl ilgalkwrmr sitplsfvsf fislfkvkdp plkqalkara
      181 veiifkaqfd tkllefkpst iaasavlsas hqlfdgkqfp sfkkaisscs yvnkenmvkc
      241 tnwveeiame gsesiwdyqh icssgseitt vtprtegdmk rrkindygtv iktvdcpvsk
      301 rvlihgpf
//
LOCUS       XP_016692278             305 aa            linear   PLN 06-AUG-2024
DEFINITION  putative cyclin-D6-1 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_016692278
VERSION     XP_016692278.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836789.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..305
                     /product="putative cyclin-D6-1 isoform X2"
                     /calculated_mol_wt=34138
     Region          50..144
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          149..237
                     /region_name="CYCLIN_AtCycD-like_rpt2"
                     /note="second cyclin box found in plant cyclin-delta
                     family; cd20544"
                     /db_xref="CDD:410247"
     CDS             1..305
                     /gene="LOC107909309"
                     /coded_by="XM_016836789.2:204..1121"
                     /db_xref="GeneID:107909309"
ORIGIN      
        1 meldlenpls nvndlfpaas tpslfllesh hmptlyyint lkathldisv rreaissisq
       61 lsckfgpflp ylaityldrf lssqgvaqpn twvlrlvais cvslaakmmk tdfsladfqg
      121 dggfmfdaqt vermeylilg alkwrmrsit plsfvsffis lfkvkdpplk qalkaravei
      181 ifkaqfdtkl lefkpstiaa savlsashql fdgkqfpsfk kaisscsyvn kenmvkctnw
      241 veeiamegse siwdyqhics sgseittvtp rtegdmkrrk indygtvikt vdcpvskrvl
      301 ihgpf
//
LOCUS       XP_016692279             255 aa            linear   PLN 06-AUG-2024
DEFINITION  transcription factor MYB4 [Gossypium hirsutum].
ACCESSION   XP_016692279
VERSION     XP_016692279.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836790.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..255
                     /product="transcription factor MYB4"
                     /calculated_mol_wt=29206
     Region          1..>187
                     /region_name="PLN03091"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:215570"
     CDS             1..255
                     /gene="LOC107909311"
                     /coded_by="XM_016836790.2:104..871"
                     /db_xref="GeneID:107909311"
ORIGIN      
        1 mvrtpccdkt glrkgtwtpe edrklmayvt rygcwnwrql pkfaglarcg kscrlrwmny
       61 lrpnikrgsy skeeeetiir lhdslgnrws aiaaqlpgrt dnevknhwht tlkkrfkhkp
      121 saaakdgkdn ssqdpklrrg tsrekeetkl ndvdhlliss pnppliless lssqqpassd
      181 qnssntntdi htdtlleaye aessnfwtep flsdinymws dvssvvpyea dqfplldgei
      241 lypfdfydqv qgldl
//
LOCUS       XP_016690946             253 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein At5g23160 [Gossypium hirsutum].
ACCESSION   XP_016690946
VERSION     XP_016690946.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016835457.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..253
                     /product="uncharacterized protein At5g23160"
                     /calculated_mol_wt=28080
     CDS             1..253
                     /gene="LOC107908216"
                     /coded_by="XM_016835457.2:470..1231"
                     /db_xref="GeneID:107908216"
ORIGIN      
        1 mknvsrnkfl lcfrpvvdmd lmldpkavvv dpsqnrralt yltvknkadi mkpsttqsss
       61 sssvsdtens imvhrpgkkr fphvikavvf eillakrvkd rkgiplsshg klldtsades
      121 vnkvpaaegv qstvskpnsv pnstqktskh qepemkpkqe giqkscssss ssnaifmlvi
      181 slavtifwgk icailltsiw lyflphhqqp agvfenlesi tkssekkskd yyrkkvimeg
      241 llqrkqskga fnf
//
LOCUS       XP_040944962             137 aa            linear   PLN 06-AUG-2024
DEFINITION  vicilin-like seed storage protein At2g28490 [Gossypium hirsutum].
ACCESSION   XP_040944962
VERSION     XP_040944962.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089028.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..137
                     /product="vicilin-like seed storage protein At2g28490"
                     /calculated_mol_wt=15591
     Region          12..>118
                     /region_name="cupin_7S_vicilin-like_N"
                     /note="7S vicilin seed storage globulin, N-terminal cupin
                     domain; cd02244"
                     /db_xref="CDD:380371"
     CDS             1..137
                     /gene="LOC107908217"
                     /coded_by="XM_041089028.1:125..538"
                     /db_xref="GeneID:107908217"
ORIGIN      
        1 mvlvaklrac nktdagemrv vkshgrrife kllhigfiki epqtlflply ldsnlilfvn
       61 tgqatvgliy kdhmverelk ngdvyqipag stfcilntee sqrlhiicsi dpseslnivf
      121 lywwsnlani spcwvwl
//
LOCUS       XP_040944963             409 aa            linear   PLN 06-AUG-2024
DEFINITION  exonuclease V, chloroplastic [Gossypium hirsutum].
ACCESSION   XP_040944963
VERSION     XP_040944963.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089029.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..409
                     /product="exonuclease V, chloroplastic"
                     /calculated_mol_wt=46515
     Region          107..387
                     /region_name="Exo5"
                     /note="Exonuclease V - a 5' deoxyribonuclease; pfam09810"
                     /db_xref="CDD:430843"
     CDS             1..409
                     /gene="LOC107909312"
                     /coded_by="XM_041089029.1:128..1357"
                     /db_xref="GeneID:107909312"
ORIGIN      
        1 mtesppntpp nsnsqhetip tipiefvsee emalieaaya atrsslssss sssicsptsr
       61 fqthsrtihs itllskrgln gsseldieds dylknpqkri rvaqpflhrf rrkralsvtd
      121 itatewcekq mefsllfgkr kiskamkagk arhvkleeev vkkvkvhiks vedswalkfi
      181 nfitcanqll fegitrelpl vgfvegiwlv gvidelrmpe ngsdrnpilv dtktrvrdtl
      241 paepqsrngr lqlmcykylw dtlaansfps gqffdffsln rsymlskdir ertassgfpa
      301 ktlddviqyy intcsmlpts hdrlllryel qkdqsvlged efaynpdwlk rqiqsnlefw
      361 lgereasytp qeerwkcrhc qfasicsgnp fpniprgsss ssdhsssss
//
LOCUS       XP_016692280             821 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At2g19130 [Gossypium hirsutum].
ACCESSION   XP_016692280
VERSION     XP_016692280.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836791.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..821
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At2g19130"
                     /calculated_mol_wt=91149
     Site            order(32..33,35,38,65,76..77,111,113,122,124,126,128..137,
                     140..152)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(57,60,62,64,66,97,99,101,103,128,130,132,134,136)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          74..178
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          211..322
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          339..428
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(366,368,383)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          498..764
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(498..502,506,518,520,548,564..567,571,573,616,618,
                     620..621,623,634,637,654..657)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(498..502,506,518,520,548,564..567,571,616,618,
                     620..621,623,634)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(502,571,573,616,618,620,637,654..657)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(633..640,651,652..657)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..821
                     /gene="LOC107909313"
                     /coded_by="XM_016836791.2:301..2766"
                     /db_xref="GeneID:107909313"
ORIGIN      
        1 mdpwlklsvl vfmwfsfnsq lslgadtisa nrslsgnqti vssggnfvlg ffkpgnssnq
       61 yigiwygnkv tqqtvvwvan reipvrdtqs selkisdgnl vlfneskvpi wstnisssss
      121 ssvvavleds gnlvlrdgpn sttplwqsld hpthtwlpgg kislnkrtnq sqlliswkns
      181 edpapglfsl eldpegtnqy lilwnrtiqy wtsgawdeqa riftlvpemr lnyiynfsfy
      241 sdenesyfty slynpdtisr fvmdisgqik qlswlegske wnlfwsqprq qcqvyaycga
      301 fgsctegglp fcnclrgfhq ksqsawnlsd fsdgcerttk lqckenrtlt ngkpdkflts
      361 pnvklpqnaq pvtatsisec estclqncsc tayaydsdgc riwigqlldl qqladdasdg
      421 ktlylrlaas efssssnnng iiigaaagsv slvlvlvifg iwrwrrrtti npkavdgsll
      481 afgyrdlqsa tknfseklgg ggfgsvfkgt lpdssviavk qlesinqgek qfrtevstig
      541 tiqhvnlvrl rgfcsegirk llvydympng sldahlfhee kskaltwktr yqialgtarg
      601 laylhekcrd ciihcdikpe nilldaelcp kvadfglakl igrdfsrvlt tmrgtrgyla
      661 pewisgvpvt akadvysygm mlfefvsgrr nseqsedgkv rffptlaasv mtqdddvltl
      721 ldpqlngdap eeelsrickv acwcvqddet rrpsmgqvvq ilegvldvnl ppiprflqvl
      781 gdnsehvvff tesssnqssq tpsytstass qaksntssms s
//
LOCUS       XP_040944965            1048 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g03230 isoform X1 [Gossypium hirsutum].
ACCESSION   XP_040944965
VERSION     XP_040944965.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089031.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1048
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g03230 isoform X1"
                     /calculated_mol_wt=118424
     Site            order(62..63,65,68,95,106..107,141,153,155,157,159..173,
                     178..185)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(88,92,94,96,126,128,130,132,134,159,161,163,165,167)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          104..204
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          <287..356
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          382..462
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(392,394,409)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          737..1002
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(737..741,745,757,759,788,804..807,811,813,856,858,
                     860..861,863,874,877,895..898)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(737..741,745,757,759,788,804..807,811,856,858,
                     860..861,863,874)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(741,811,813,856,858,860,877,895..898)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(873..880,891..898)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1048
                     /gene="LOC121214795"
                     /coded_by="XM_041089031.1:164..3310"
                     /db_xref="GeneID:121214795"
ORIGIN      
        1 mrniqsslyc amaslsgskr vslffisnsa nrmffhsfsl calflyfcld ccfardtitf
       61 dnplnsskgp lvsagkkfal gfftpnngss yvgiwyyngl eprtivwvan rdepvsnstt
      121 wvfgishdgn lmlsdkrnrq nltalvgiss pstrslklld sgnlilsegl dnfstsvvwq
      181 sfhyptdtfl pgmkinnlvl tswkslhdpa sgrfsfrqda drkdqyiitn nellpywksg
      241 lsgtsagdde isplvslmll ntsysktgvs csmlypkgnc idrqtrnqsh dntrlvmgsd
      301 gilrfftrdn qtdkwsltww eprdrcsvfd acdkfgscnn knrvpckclp gfkpqslenw
      361 kkgdfsegci reypvcgqhr keflklsmmk vqkpysefdv ndtdecrnkc letchcqays
      421 faekqtylrg segnltcsiw tddlknsqes yanggidlyl rvhlsgnatc rpcgtniipy
      481 plstgpscgd qkyfkfncht endtglvsfn angqtfrvss inqetqsfsi qveecrpgds
      541 kekllrlprl spffvsgcnv ysaqnnfsid svgenkwfye velrwkpppe picrsfkdcn
      601 dwpnssckva hdgkkrctcn ppflwnsskv scsaeatlqq rpgplekktp ayliilgitt
      661 amlvilcvaf awnhkrrrmp nrrgnlefsl hgsarrvldf inlddfkedn kedidvpyfn
      721 lesilvatdn faeanklgqg gfgpvykgkl prgqeiaikr lsrgsgqgle efknevvlia
      781 klqhrnlvrl lgycvkgyek mliyeympnk sldsfifdrs rcvlldwekr fniilgiarg
      841 llylhhdsrl riihrdlkts nilldeemnp kisdfglaki fggkqieast ervvgtygym
      901 speyaldgff siksdvfsfg vvlletisgk rntgfyqaeq plsllgyawk lwkegraldl
      961 aeqslrqscn ayeyircvnv gllcvqedpd drpamsnvlf mlgsetpslp ipkrpayvvr
     1021 rsllssasss gnqiwitelt tstleegr
//
LOCUS       XP_040944966            1047 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g03230 isoform X2 [Gossypium hirsutum].
ACCESSION   XP_040944966
VERSION     XP_040944966.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089032.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..1047
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g03230 isoform X2"
                     /calculated_mol_wt=118295
     Site            order(62..63,65,68,95,106..107,141,153,155,157,159..173,
                     178..185)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(88,92,94,96,126,128,130,132,134,159,161,163,165,167)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          104..204
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          <287..356
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          382..462
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(392,394,409)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          736..1001
                     /region_name="STKc_IRAK"
                     /note="Catalytic domain of the Serine/Threonine kinases,
                     Interleukin-1 Receptor Associated Kinases and related
                     STKs; cd14066"
                     /db_xref="CDD:270968"
     Site            order(736..740,744,756,758,787,803..806,810,812,855,857,
                     859..860,862,873,876,894..897)
                     /site_type="active"
                     /db_xref="CDD:270968"
     Site            order(736..740,744,756,758,787,803..806,810,855,857,
                     859..860,862,873)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270968"
     Site            order(740,810,812,855,857,859,876,894..897)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270968"
     Site            order(872..879,890..897)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270968"
     CDS             1..1047
                     /gene="LOC121214795"
                     /coded_by="XM_041089032.1:164..3307"
                     /db_xref="GeneID:121214795"
ORIGIN      
        1 mrniqsslyc amaslsgskr vslffisnsa nrmffhsfsl calflyfcld ccfardtitf
       61 dnplnsskgp lvsagkkfal gfftpnngss yvgiwyyngl eprtivwvan rdepvsnstt
      121 wvfgishdgn lmlsdkrnrq nltalvgiss pstrslklld sgnlilsegl dnfstsvvwq
      181 sfhyptdtfl pgmkinnlvl tswkslhdpa sgrfsfrqda drkdqyiitn nellpywksg
      241 lsgtsagdde isplvslmll ntsysktgvs csmlypkgnc idrqtrnqsh dntrlvmgsd
      301 gilrfftrdn qtdkwsltww eprdrcsvfd acdkfgscnn knrvpckclp gfkpqslenw
      361 kkgdfsegci reypvcgqhr keflklsmmk vqkpysefdv ndtdecrnkc letchcqays
      421 faekqtylrg segnltcsiw tddlknsqes yanggidlyl rvhlsgnatc rpcgtniipy
      481 plstgpscgd qkyfkfncht endtglvsfn angqtfrvss inqetqsfsi qveecrpgds
      541 kekllrlprl spffvsgcnv ysaqnnfsid svgenkwfye velrwkpppe picrsfkdcn
      601 dwpnssckva hdgkkrctcn ppflwnsskv scsaatlqqr pgplekktpa yliilgitta
      661 mlvilcvafa wnhkrrrmpn rrgnlefslh gsarrvldfi nlddfkednk edidvpyfnl
      721 esilvatdnf aeanklgqgg fgpvykgklp rgqeiaikrl srgsgqglee fknevvliak
      781 lqhrnlvrll gycvkgyekm liyeympnks ldsfifdrsr cvlldwekrf niilgiargl
      841 lylhhdsrlr iihrdlktsn illdeemnpk isdfglakif ggkqieaste rvvgtygyms
      901 peyaldgffs iksdvfsfgv vlletisgkr ntgfyqaeqp lsllgyawkl wkegraldla
      961 eqslrqscna yeyircvnvg llcvqedpdd rpamsnvlfm lgsetpslpi pkrpayvvrr
     1021 sllssasssg nqiwiteltt stleegr
//
LOCUS       XP_040944967             896 aa            linear   PLN 06-AUG-2024
DEFINITION  G-type lectin S-receptor-like serine/threonine-protein kinase
            At4g03230 isoform X3 [Gossypium hirsutum].
ACCESSION   XP_040944967
VERSION     XP_040944967.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_041089033.1
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..896
                     /product="G-type lectin S-receptor-like
                     serine/threonine-protein kinase At4g03230 isoform X3"
                     /calculated_mol_wt=101437
     Site            order(62..63,65,68,95,106..107,141,153,155,157,159..173,
                     178..185)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:237995"
     Site            order(88,92,94,96,126,128,130,132,134,159,161,163,165,167)
                     /site_type="other"
                     /note="mannose binding site [chemical binding]"
                     /db_xref="CDD:237995"
     Region          104..204
                     /region_name="B_lectin"
                     /note="D-mannose binding lectin; pfam01453"
                     /db_xref="CDD:460217"
     Region          <287..356
                     /region_name="S_locus_glycop"
                     /note="S-locus glycoprotein domain; pfam00954"
                     /db_xref="CDD:395761"
     Region          382..462
                     /region_name="PAN_AP_plant"
                     /note="Plant PAN/APPLE-like domain; present in plant
                     S-receptor protein kinases and secreted glycoproteins.
                     PAN/APPLE domains fulfill diverse biological functions by
                     mediating protein-protein or protein-carbohydrate
                     interactions. S-receptor protein kinases and...; cd01098"
                     /db_xref="CDD:238531"
     Site            order(392,394,409)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238531"
     Region          470..530
                     /region_name="GUB_WAK_bind"
                     /note="Wall-associated receptor kinase
                     galacturonan-binding; pfam13947"
                     /db_xref="CDD:464052"
     Region          737..>896
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(737..740,743,745,757,759,788,804..807,856,860..861,
                     863,873..874)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..896
                     /gene="LOC121214795"
                     /coded_by="XM_041089033.1:164..2854"
                     /db_xref="GeneID:121214795"
ORIGIN      
        1 mrniqsslyc amaslsgskr vslffisnsa nrmffhsfsl calflyfcld ccfardtitf
       61 dnplnsskgp lvsagkkfal gfftpnngss yvgiwyyngl eprtivwvan rdepvsnstt
      121 wvfgishdgn lmlsdkrnrq nltalvgiss pstrslklld sgnlilsegl dnfstsvvwq
      181 sfhyptdtfl pgmkinnlvl tswkslhdpa sgrfsfrqda drkdqyiitn nellpywksg
      241 lsgtsagdde isplvslmll ntsysktgvs csmlypkgnc idrqtrnqsh dntrlvmgsd
      301 gilrfftrdn qtdkwsltww eprdrcsvfd acdkfgscnn knrvpckclp gfkpqslenw
      361 kkgdfsegci reypvcgqhr keflklsmmk vqkpysefdv ndtdecrnkc letchcqays
      421 faekqtylrg segnltcsiw tddlknsqes yanggidlyl rvhlsgnatc rpcgtniipy
      481 plstgpscgd qkyfkfncht endtglvsfn angqtfrvss inqetqsfsi qveecrpgds
      541 kekllrlprl spffvsgcnv ysaqnnfsid svgenkwfye velrwkpppe picrsfkdcn
      601 dwpnssckva hdgkkrctcn ppflwnsskv scsaeatlqq rpgplekktp ayliilgitt
      661 amlvilcvaf awnhkrrrmp nrrgnlefsl hgsarrvldf inlddfkedn kedidvpyfn
      721 lesilvatdn faeanklgqg gfgpvykgkl prgqeiaikr lsrgsgqgle efknevvlia
      781 klqhrnlvrl lgycvkgyek mliyeympnk sldsfifdrs rcvlldwekr fniilgiarg
      841 llylhhdsrl riihrdlkts nilldeemnp kisdfglaki fggkqieast ervvgt
//
LOCUS       XP_016692282             692 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692282
VERSION     XP_016692282.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836793.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="uncharacterized protein"
                     /calculated_mol_wt=75880
     Region          405..425
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <409..>550
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          426..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          448..469
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          470..492
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          493..514
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          515..527
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..692
                     /gene="LOC107909315"
                     /coded_by="XM_016836793.2:814..2892"
                     /db_xref="GeneID:107909315"
ORIGIN      
        1 mvrfscfnah igsqkpkktv qpsveamhtt iedfsqvqap keltkaanmd sffpetqtta
       61 eihesvepvt vssspnpswk sedikdgvil dsssrvlqnp hylkkcrslg sglclegrvp
      121 gqndtddqtd qgfssdshdh glvedgskhi avsqnasfse svqvssnhvy nepvfsigds
      181 llpekdghdi snlplpcera nasgdhspnn apvivkscsm pnivasallf gghsppkcla
      241 rrtrssedvh vlsmrqketl ihdvdtevmr eqerddgmhk nhktnfessy egfesyscsa
      301 sakdwivpvs devssmkmlq eelrvlnrne ltgkdfkikr iedwvnglqh vrpsedsvel
      361 shpndqvkae pavyndltaa kvdvkvtpgm eaakryissl sasattaqla nhglvvipfl
      421 safvslkvln lsgnaiarit agalprglhm lnlsrnnist ieglreltrl rvlnlsynri
      481 frighglasc sslkelylag nkiseveglh rllkltvldl rfnkistakc lgqlaanyns
      541 lqaiglegnp aqknvgdenl kkhlqgllpn lvyfnrqaik vstvkdgaer svrlgisahq
      601 fdrglrsehr atrksshgts ihrpsssstr ghksqvaspm qsrgrhgryp psgakatnnr
      661 qnhhvdlgsk vlnfkselsm rrtqsegtlg ll
//
LOCUS       XP_016692284             692 aa            linear   PLN 06-AUG-2024
DEFINITION  uncharacterized protein [Gossypium hirsutum].
ACCESSION   XP_016692284
VERSION     XP_016692284.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836795.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..692
                     /product="uncharacterized protein"
                     /calculated_mol_wt=75880
     Region          405..425
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <409..>550
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          426..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          448..469
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          470..492
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          493..514
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          515..527
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..692
                     /gene="LOC107909315"
                     /coded_by="XM_016836795.2:726..2804"
                     /db_xref="GeneID:107909315"
ORIGIN      
        1 mvrfscfnah igsqkpkktv qpsveamhtt iedfsqvqap keltkaanmd sffpetqtta
       61 eihesvepvt vssspnpswk sedikdgvil dsssrvlqnp hylkkcrslg sglclegrvp
      121 gqndtddqtd qgfssdshdh glvedgskhi avsqnasfse svqvssnhvy nepvfsigds
      181 llpekdghdi snlplpcera nasgdhspnn apvivkscsm pnivasallf gghsppkcla
      241 rrtrssedvh vlsmrqketl ihdvdtevmr eqerddgmhk nhktnfessy egfesyscsa
      301 sakdwivpvs devssmkmlq eelrvlnrne ltgkdfkikr iedwvnglqh vrpsedsvel
      361 shpndqvkae pavyndltaa kvdvkvtpgm eaakryissl sasattaqla nhglvvipfl
      421 safvslkvln lsgnaiarit agalprglhm lnlsrnnist ieglreltrl rvlnlsynri
      481 frighglasc sslkelylag nkiseveglh rllkltvldl rfnkistakc lgqlaanyns
      541 lqaiglegnp aqknvgdenl kkhlqgllpn lvyfnrqaik vstvkdgaer svrlgisahq
      601 fdrglrsehr atrksshgts ihrpsssstr ghksqvaspm qsrgrhgryp psgakatnnr
      661 qnhhvdlgsk vlnfkselsm rrtqsegtlg ll
//
LOCUS       XP_016692281             255 aa            linear   PLN 06-AUG-2024
DEFINITION  universal stress protein PHOS34 [Gossypium hirsutum].
ACCESSION   XP_016692281
VERSION     XP_016692281.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016836792.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053438.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_007990345.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/01/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D02"
     Protein         1..255
                     /product="universal stress protein PHOS34"
                     /calculated_mol_wt=27996
     Region          41..210
                     /region_name="USP_At3g01520-like"
                     /note="universal stress protein At3g01520 and similar
                     proteins; cd23659"
                     /db_xref="CDD:467505"
     CDS             1..255
                     /gene="LOC107909314"
                     /coded_by="XM_016836792.2:4571..5338"
                     /db_xref="GeneID:107909314"
ORIGIN      
        1 mnpqqpspse pdlqvpslas lriqpssprf pfstpiagsq rriaiavdls desayavrwa
       61 vqnylrpgda vvllhvrpts vlygadwgsi klqit